BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780288|ref|YP_003064701.1| exodeoxyribonuclease III protein [Candidatus Liberibacter asiaticus str. psy62] (281 letters) Database: nr 13,984,884 sequences; 4,792,584,752 total letters Searching..................................................done >gi|254780288|ref|YP_003064701.1| exodeoxyribonuclease III protein [Candidatus Liberibacter asiaticus str. psy62] gi|254039965|gb|ACT56761.1| exodeoxyribonuclease III protein [Candidatus Liberibacter asiaticus str. psy62] Length = 281 Score = 257 bits (655), Expect = 2e-66, Method: Composition-based stats. Identities = 281/281 (100%), Positives = 281/281 (100%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC Sbjct: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT Sbjct: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR Sbjct: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR Sbjct: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 Query: 241 IDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 IDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI Sbjct: 241 IDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 >gi|92117300|ref|YP_577029.1| exodeoxyribonuclease III (xth) [Nitrobacter hamburgensis X14] gi|91800194|gb|ABE62569.1| Exodeoxyribonuclease III [Nitrobacter hamburgensis X14] Length = 266 Score = 239 bits (610), Expect = 3e-61, Method: Composition-based stats. Identities = 125/261 (47%), Positives = 175/261 (67%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+R R+ +L AW+ E PD++CLQE K D+ FP E +++L Y++ T GQK Sbjct: 1 MRIATWNVNSVRQRLDHLLAWLGETAPDVVCLQEIKCVDEQFPREAIEALGYNVVTHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 ++NGVA+LSK+ E L GDD DVQ+RF+E ++ +RI LYLP+GNP + K Sbjct: 61 TFNGVALLSKFPFDETRPRLAGDDGDVQSRFLEGVVSLKHGVVRIACLYLPNGNPPNTEK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ WI R + ++ +RL+ EE + AGD+N+IP P D YNP W +DA F + R++F Sbjct: 121 YPYKLKWISRLIEYSKERLKSEETFVLAGDFNVIPAPRDVYNPAAWVDDALFRPQTREAF 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q L +G TDA+RA D Y+FWDY A +W KN G+RIDH++LSP+A+ L + ID Sbjct: 181 QTLLGLGLTDALRAASDATGDYTFWDYQAGAWQKNNGLRIDHLLLSPQASDRLSAVGIDR 240 Query: 244 KPRGWTKPSDHTPVIVSLDIP 264 RGW K SDH PV + LD+ Sbjct: 241 HVRGWEKASDHVPVWIDLDLD 261 >gi|110634038|ref|YP_674246.1| exodeoxyribonuclease III [Mesorhizobium sp. BNC1] gi|110285022|gb|ABG63081.1| Exodeoxyribonuclease III [Chelativorans sp. BNC1] Length = 262 Score = 239 bits (610), Expect = 3e-61, Method: Composition-based stats. Identities = 137/260 (52%), Positives = 183/260 (70%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+N ++ARI NL W++E NPDI+CLQE K+ D+ FP E +++L YH+ET GQK Sbjct: 1 MKIATWNINGVKARIENLVHWLQEANPDIVCLQEIKSLDEQFPREPIEALGYHVETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVA+LSK + E+ LPG+D D QARFIE F+ LR+ +LYLP+GNPI S K Sbjct: 61 GFNGVALLSKLRFDEVSRGLPGNDGDEQARFIEGVFSTEGGALRVASLYLPNGNPIASEK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K++W+ R +A +RL LEEPL+ AGDYN+IP+P D NP W DA + E RQ+F Sbjct: 121 FAYKLAWMDRLELWAKRRLMLEEPLVLAGDYNVIPEPADAKNPENWLGDALYQPESRQAF 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 ++L N+GFTDA+R+ + Y+FWDY A +W KN GIRIDH+MLSPEA + SA + Sbjct: 181 RRLCNLGFTDALRSATNEPGTYTFWDYQAGAWQKNNGIRIDHLMLSPEAADRIASASVQK 240 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 R W KPSDH PV+V L I Sbjct: 241 HTRAWEKPSDHVPVVVDLRI 260 >gi|75676002|ref|YP_318423.1| exodeoxyribonuclease III xth [Nitrobacter winogradskyi Nb-255] gi|74420872|gb|ABA05071.1| Exodeoxyribonuclease III [Nitrobacter winogradskyi Nb-255] Length = 266 Score = 238 bits (606), Expect = 8e-61, Method: Composition-based stats. Identities = 127/260 (48%), Positives = 173/260 (66%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+R R+ +L W++E PD++CLQE K D+ FP E +++L Y++ T GQK Sbjct: 1 MRIATWNVNSVRQRLDHLITWLRETAPDVVCLQEIKCVDEQFPREAIEALGYNVVTHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 ++NGVA+LSK+ E L GDD DVQARF+E T+ +R+ LYLP+GNP + K Sbjct: 61 TFNGVALLSKFPFDETRPRLAGDDGDVQARFLEGVVTLEHGAVRVACLYLPNGNPPNTEK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ WI R + ++ +RL+ EE I AGD+N+IP P D YN W +DA F RQ+F Sbjct: 121 YPYKLKWISRLIEYSRERLKSEEAFILAGDFNVIPAPCDVYNSAAWVDDALFRPRTRQAF 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q L +G TDA+RA D Y+FWDY A +W KN G+RIDH++LSP+A+ L A ID Sbjct: 181 QTLLGLGLTDALRAVSDAAGEYTFWDYQAGAWQKNNGLRIDHLLLSPQASDRLSGAGIDR 240 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 RGW K SDH PV + LD+ Sbjct: 241 HVRGWEKASDHVPVWIDLDL 260 >gi|85716516|ref|ZP_01047487.1| Exodeoxyribonuclease III xth [Nitrobacter sp. Nb-311A] gi|85696705|gb|EAQ34592.1| Exodeoxyribonuclease III xth [Nitrobacter sp. Nb-311A] Length = 279 Score = 235 bits (599), Expect = 6e-60, Method: Composition-based stats. Identities = 126/262 (48%), Positives = 173/262 (66%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ +ATWNVNSIR R+ +L W+ E PD++CLQE K D+ FP E +++L Y++ T G Sbjct: 12 RLMRIATWNVNSIRQRLDHLITWLGETTPDVVCLQEIKCVDEQFPREAIEALGYNVVTHG 71 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 QK++NGVA+LSK+ E L GDD DVQ+RF+E ++ +RI LYLP+GNP + Sbjct: 72 QKTFNGVALLSKFPFDETRPRLAGDDGDVQSRFLEGVVSLKQGIVRIACLYLPNGNPPNT 131 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 KY K+ WI R + ++ +RL+ EE + AGD+N+IP P D YNP W +DA F RQ Sbjct: 132 EKYPYKLKWISRLIEYSKERLKSEEAFVLAGDFNVIPAPRDVYNPASWVDDALFRPHTRQ 191 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +FQ L +G TDA+RA D Y+FWDY A +W KN G+RIDH++LSP+A+ L I Sbjct: 192 AFQTLLGLGLTDALRAASDAAGEYTFWDYQAGAWQKNNGLRIDHLLLSPQASDRLGGVGI 251 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 D RGW K SDH PV + LD+ Sbjct: 252 DRHVRGWEKASDHVPVWIDLDL 273 >gi|83942567|ref|ZP_00955028.1| exodeoxyribonuclease III [Sulfitobacter sp. EE-36] gi|83846660|gb|EAP84536.1| exodeoxyribonuclease III [Sulfitobacter sp. EE-36] Length = 265 Score = 235 bits (599), Expect = 6e-60, Method: Composition-based stats. Identities = 121/262 (46%), Positives = 162/262 (61%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 +V+ +AT+N+N I+ARI L W+ E PD+ LQE K+ D+ FP E + Y++ET G Sbjct: 4 AVMKIATFNINGIKARIDALPQWLDEAQPDVAILQEIKSVDEGFPRELFEDRGYNVETHG 63 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 QKS+NGVAILSK ++ LPGD+ D QAR+IEAT + ++R+ LYLP+GNP Sbjct: 64 QKSFNGVAILSKLPLEDVTRGLPGDESDEQARYIEATVVGDHSSVRLCGLYLPNGNPAPG 123 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 KYD K++W++R A L E P + GD+NIIPQ D P W DA F E R Sbjct: 124 PKYDYKLAWMQRLEDRARALLAEETPFLLTGDFNIIPQAEDAATPDAWREDALFRPESRA 183 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 ++++L +G T+A RA YSFWDY A +W++N GIRIDH +LSP L +I Sbjct: 184 AWRRLLALGLTEAFRARTQGPGHYSFWDYQAGAWNRNNGIRIDHFLLSPAIADSLRDCQI 243 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 D RG KPSDH PV V LD+ Sbjct: 244 DKDVRGREKPSDHVPVWVELDL 265 >gi|154253458|ref|YP_001414282.1| exodeoxyribonuclease III Xth [Parvibaculum lavamentivorans DS-1] gi|154157408|gb|ABS64625.1| exodeoxyribonuclease III Xth [Parvibaculum lavamentivorans DS-1] Length = 261 Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats. Identities = 128/260 (49%), Positives = 177/260 (68%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A++NVNSI+AR+ NL W+KE PDI+CLQE K D+NFP ++ L Y++ GQK Sbjct: 1 MKIASFNVNSIKARLTNLTDWLKEAEPDIVCLQELKCIDENFPHGPIEELGYNVAVNGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAILSK+ ++ LPG+D D AR+IEA + N +R+ ++YLP+GNP+ + K Sbjct: 61 TYNGVAILSKHPLEDVSRGLPGNDGDDHARYIEAVVSANGSVVRVASIYLPNGNPVDTDK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W+ R + A + L EEPL+ AGDYN+IP D +NP W NDA F E R F Sbjct: 121 FTYKLGWMDRLIDHARELLSYEEPLVLAGDYNVIPTIDDVHNPAAWVNDALFRPETRAKF 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 ++L N+G TDA RA H H Y+FWDY A +W+K+ GIRIDH++LSP+A LL ++ ID Sbjct: 181 RELINLGLTDAFRACHREAHRYTFWDYQAGAWAKDNGIRIDHLLLSPQAADLLKASDIDR 240 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 RG KPSDH P+ V LD+ Sbjct: 241 AVRGREKPSDHVPIWVELDL 260 >gi|146340991|ref|YP_001206039.1| exodeoxyribonuclease III [Bradyrhizobium sp. ORS278] gi|146193797|emb|CAL77814.1| exodeoxyribonuclease III [Bradyrhizobium sp. ORS278] Length = 263 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 129/260 (49%), Positives = 170/260 (65%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSIR RI +L W+KE +PDI+CLQE K D FP +++L Y++ T GQK Sbjct: 1 MRIATWNVNSIRQRIEHLVTWLKECSPDIVCLQEIKCTDDAFPRLEIEALGYNVVTHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 ++NGVA+LSK E + L GD DV ARF+E ++ + +RI LYLP+GNP + K Sbjct: 61 TFNGVALLSKLPFDETKSGLDGDAEDVHARFLEGVVSLKSGVVRIACLYLPNGNPPNTEK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W+ R +A +RL+ EEPLI AGD+N+IP D NP W DA F E R+SF Sbjct: 121 YPYKLKWMSRLRDYARERLKTEEPLILAGDFNVIPAAADVSNPEAWVEDALFRPETRESF 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q L +G TDA+RA +D Y+FWDY A +W KN GIRIDH++LSP+A+ L ID+ Sbjct: 181 QSLLGLGLTDALRAVNDAPGQYTFWDYQAGAWQKNAGIRIDHLLLSPQASDRLVEVGIDS 240 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 R W KPSDH PV D+ Sbjct: 241 YVRAWEKPSDHVPVWADFDL 260 >gi|227821924|ref|YP_002825894.1| exodeoxyribonuclease III protein [Sinorhizobium fredii NGR234] gi|227340923|gb|ACP25141.1| exodeoxyribonuclease III protein [Sinorhizobium fredii NGR234] Length = 319 Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats. Identities = 141/261 (54%), Positives = 182/261 (69%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 M + +ATWN+N ++AR+ L AW+K +NPDI CLQE K+ D FP E +++L YHIET Sbjct: 57 MRPMKIATWNINGVKARLDGLVAWLKASNPDIACLQEIKSVDDAFPREEIEALGYHIETH 116 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 GQK +NGVA+LSK +P E+ LPGDD D Q+RFIE F++ +R+ LYLP+GNP+ Sbjct: 117 GQKGFNGVALLSKLRPDEVNRGLPGDDSDEQSRFIEGVFSVAGGAVRVCCLYLPNGNPVG 176 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + KY K+ W++R FA +RL LEEPLI AGDYN+IP+ HDC++ +W NDA F E R Sbjct: 177 TEKYPYKLGWMQRLASFAKERLLLEEPLILAGDYNVIPEAHDCWDVNVWRNDALFLPETR 236 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 +F++L+N+G TDA+RAT D LYSFWDY A W KN GIRIDH+MLSPEA L S Sbjct: 237 AAFRQLRNLGLTDAVRATTDEVPLYSFWDYQAGCWQKNFGIRIDHLMLSPEAVDKLVSTS 296 Query: 241 IDTKPRGWTKPSDHTPVIVSL 261 I+ R W KPSDH PV Sbjct: 297 IEKHVRAWEKPSDHVPVAAQF 317 >gi|83953786|ref|ZP_00962507.1| exodeoxyribonuclease III [Sulfitobacter sp. NAS-14.1] gi|83841731|gb|EAP80900.1| exodeoxyribonuclease III [Sulfitobacter sp. NAS-14.1] Length = 265 Score = 232 bits (592), Expect = 4e-59, Method: Composition-based stats. Identities = 120/260 (46%), Positives = 160/260 (61%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+N+N I+ARI L W+ + PD+ LQE K+ D+ FP E + Y++ET GQK Sbjct: 6 MKIATFNINGIKARIDALPQWLDDAQPDVAILQEIKSVDEGFPRELFEDRGYNVETHGQK 65 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 S+NGVAILSK ++ LPGDD D QAR+IEAT + ++R+ LYLP+GNP K Sbjct: 66 SFNGVAILSKLPLEDVTRGLPGDDSDEQARYIEATVVGDHSSVRLCGLYLPNGNPAPGPK 125 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 YD K++W++R A L E P + GD+NIIPQ D P W DA F E R ++ Sbjct: 126 YDYKLAWMQRLEDRARALLAEETPFLLTGDFNIIPQAEDAATPDAWREDALFRPESRAAW 185 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 ++L +G T+A RA YSFWDY A +W++N GIRIDH +LSP L +ID Sbjct: 186 RRLLALGLTEAFRARTQGPGHYSFWDYQAGAWNRNNGIRIDHFLLSPAIADSLRDCQIDK 245 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 RG KPSDH PV V LD+ Sbjct: 246 DVRGREKPSDHVPVWVELDL 265 >gi|83311632|ref|YP_421896.1| exonuclease III [Magnetospirillum magneticum AMB-1] gi|82946473|dbj|BAE51337.1| Exonuclease III [Magnetospirillum magneticum AMB-1] Length = 440 Score = 232 bits (592), Expect = 4e-59, Method: Composition-based stats. Identities = 116/260 (44%), Positives = 162/260 (62%), Gaps = 5/260 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+RAR+ N+ W+ PD++ LQE K +D++FP +Q+ YH GQK Sbjct: 185 LRIATWNVNSVRARLGNVLDWLGSFAPDVVLLQEIKCQDQDFPLLEIQAAGYHAAVHGQK 244 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 SYNGVAILS++ ++ T L GDD D QAR+IEAT R+ +LYLP+GNP K Sbjct: 245 SYNGVAILSRHPMSDVRTRLSGDDSDEQARYIEATIGGW----RLASLYLPNGNPAPGDK 300 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 +D K++W+ R A L P + GD+NI P D Y+P W +DA + R ++ Sbjct: 301 FDYKLAWMARLRTHAQALLAQGIPFVLGGDFNICPTDDDVYDPPKWRDDALCRPDSRAAW 360 Query: 184 QKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 + + N+G T+A RA H YSFWDY A +W +++G+RIDH +LSP+A LH+ ID Sbjct: 361 RSIVNLGLTEAFRALHPGEKGRYSFWDYQAGAWQRDEGLRIDHFLLSPQAADCLHACEID 420 Query: 243 TKPRGWTKPSDHTPVIVSLD 262 PRG K SDHTPV + L+ Sbjct: 421 KAPRGKEKASDHTPVWIELE 440 >gi|39935926|ref|NP_948202.1| exodeoxyribonuclease III [Rhodopseudomonas palustris CGA009] gi|39649780|emb|CAE28302.1| exodeoxyribonuclease III [Rhodopseudomonas palustris CGA009] Length = 303 Score = 231 bits (589), Expect = 9e-59, Method: Composition-based stats. Identities = 130/260 (50%), Positives = 175/260 (67%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+R R+ +L +W+++ PD++CLQE K D+ FP E +++L Y++ T GQK Sbjct: 41 MRIATWNVNSVRQRLDHLVSWLQDCQPDVVCLQEIKCVDEAFPREPIEALGYNVVTHGQK 100 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 ++NGVA+LSKY E L GD+ DV ARF+E ++ +R+ LYLP+GNP+ S K Sbjct: 101 TFNGVALLSKYPLEEANPGLAGDESDVHARFLEGVVSLKHGVVRVACLYLPNGNPVGSEK 160 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+SW+ R +A QRL+ EEPLI AGD+N+IPQ D +NP W DA F E R+SF Sbjct: 161 YPYKLSWMARLRDYAQQRLKTEEPLILAGDFNVIPQAEDVHNPAAWTEDALFRPETRESF 220 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q L +G TDA+RAT D Y+FWDY A +W KN GIRIDH++LSP+A L ID+ Sbjct: 221 QTLLGLGLTDALRATTDAPGQYTFWDYQAGAWQKNWGIRIDHLLLSPQAADRLRHVGIDS 280 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 R W KPSDH PV D+ Sbjct: 281 YVRNWEKPSDHVPVWADFDL 300 >gi|328543967|ref|YP_004304076.1| Exodeoxyribonuclease III [Polymorphum gilvum SL003B-26A1] gi|326413711|gb|ADZ70774.1| Exodeoxyribonuclease III [Polymorphum gilvum SL003B-26A1] Length = 260 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 127/258 (49%), Positives = 172/258 (66%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+N ++ARI + AW++E PD+ CLQE K+ D+ FP + + L Y++ T GQK Sbjct: 1 MKIATWNINGVKARIDTVLAWLQEARPDVACLQEIKSVDEAFPCQPFEDLGYNVATHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVA+LSK ++ LPGDD D QAR+IEA + + +R+G LYLP+GNP+ + K Sbjct: 61 GFNGVALLSKRPLEDVRRGLPGDDGDEQARYIEACVSTDRGAVRVGCLYLPNGNPLGTDK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K++W+ R R A+ RL E+P + GDYN+IP+P D NP W DA F E RQ F Sbjct: 121 FPYKLAWMDRLRRHAALRLAEEQPFLLLGDYNVIPEPKDARNPQDWLGDALFQPESRQHF 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + L N+GFT+A+RA D Y+FWDY A +W KN GIRIDH++LSP+A LL S ID Sbjct: 181 RALVNLGFTEAVRACTDAADTYTFWDYQAGAWQKNNGIRIDHVLLSPQAGDLLASCGIDK 240 Query: 244 KPRGWTKPSDHTPVIVSL 261 R W KPSDH PV V L Sbjct: 241 HVRAWEKPSDHVPVWVEL 258 >gi|316933979|ref|YP_004108961.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris DX-1] gi|315601693|gb|ADU44228.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris DX-1] Length = 263 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 133/260 (51%), Positives = 176/260 (67%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+R R+ +L W+K++ D++CLQE K D+ FP E +++L Y++ T GQK Sbjct: 1 MRIATWNVNSVRQRLDHLLTWLKDSQSDVVCLQEIKCVDEAFPREPIEALGYNVVTHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 ++NGVA+LSKY E L GDD DV ARF+E ++ +R+ LYLP+GNP+ S K Sbjct: 61 TFNGVALLSKYPLEEANPGLAGDDGDVHARFLEGVVSLKHGVVRVACLYLPNGNPVGSEK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+SW+ R +A QRL EEPLI AGD+N+IPQP D +NP W DA F E R+SF Sbjct: 121 YPYKLSWMARLRDYAQQRLRTEEPLILAGDFNVIPQPGDVHNPAAWTEDALFRPETRESF 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q L +GFTDA+RAT D Y+FWDY A +W KN G+RIDH++LSP+A L ID+ Sbjct: 181 QALLGLGFTDALRATTDAPGQYTFWDYQAGAWQKNWGLRIDHLLLSPQAADRLRHVGIDS 240 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 R W KPSDH PV LD+ Sbjct: 241 YVRNWEKPSDHVPVWADLDL 260 >gi|118589109|ref|ZP_01546516.1| exodeoxyribonuclease III [Stappia aggregata IAM 12614] gi|118438438|gb|EAV45072.1| exodeoxyribonuclease III [Stappia aggregata IAM 12614] Length = 260 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 124/258 (48%), Positives = 167/258 (64%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+N ++ARI + W+KE +PD+ CLQE K+ D+NFP + + L Y +ET GQK Sbjct: 1 MKIATWNINGVKARIDTVLEWLKEASPDVACLQEIKSVDENFPRQPFEDLGYAVETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVA+LSK +I LPG+D D QAR+IEA +RIG LYLP+GNP+ + K Sbjct: 61 GFNGVALLSKTPLDDIQRGLPGNDADEQARYIEARLATEKGPVRIGCLYLPNGNPLGTEK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W+ R + A +RLE E P + GDYN+IP P D NP W DA F E RQ F Sbjct: 121 FSYKLEWMDRLITHAQKRLEEETPFLLLGDYNVIPDPVDAKNPQNWLEDALFQPESRQRF 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + L ++G T+A+R+ + ++FWDY A +W KN GIRIDHI++SP+AT ID Sbjct: 181 RALTHLGLTEAVRSCTEAPETFTFWDYQAGAWQKNNGIRIDHILMSPQATDRFSGCGIDK 240 Query: 244 KPRGWTKPSDHTPVIVSL 261 RGW KPSDH PV V L Sbjct: 241 HVRGWEKPSDHVPVWVKL 258 >gi|315122848|ref|YP_004063337.1| exodeoxyribonuclease III protein [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313496250|gb|ADR52849.1| exodeoxyribonuclease III protein [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 265 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 216/265 (81%), Positives = 242/265 (91%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 MS+VT+ATWNVNSIR RI N+ WI+ENNPDI+CLQETKTEDK FPFE +QSLNYHIETC Sbjct: 1 MSLVTIATWNVNSIRVRIKNVITWIQENNPDIVCLQETKTEDKTFPFEAIQSLNYHIETC 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 GQKSYNGVAILSKYQPIE++ LPGDDLD QARFIEATFTIN+Q LRIGN+YLP+GNPI Sbjct: 61 GQKSYNGVAILSKYQPIEMIKKLPGDDLDEQARFIEATFTINSQILRIGNIYLPNGNPIA 120 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 STKYD KISWIKRFL+FASQRLELEE LIFAGDYNI+PQP DC++ I+ +NDACFTLEVR Sbjct: 121 STKYDYKISWIKRFLQFASQRLELEEALIFAGDYNIVPQPRDCHDSIMLQNDACFTLEVR 180 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 Q+FQKLQNMGFTDAIRAT+D HH+YSFWDY++DSW KNKG+RIDH+MLSPEAT+ LHSA Sbjct: 181 QAFQKLQNMGFTDAIRATNDAHHIYSFWDYFSDSWRKNKGMRIDHVMLSPEATTFLHSAY 240 Query: 241 IDTKPRGWTKPSDHTPVIVSLDIPE 265 ID KPRG KPSDHTPVIV+LDIPE Sbjct: 241 IDKKPRGCVKPSDHTPVIVALDIPE 265 >gi|148255795|ref|YP_001240380.1| exodeoxyribonuclease III [Bradyrhizobium sp. BTAi1] gi|146407968|gb|ABQ36474.1| Exodeoxyribonuclease III [Bradyrhizobium sp. BTAi1] Length = 263 Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats. Identities = 127/260 (48%), Positives = 167/260 (64%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+R RI +L W+KE +PDI+CLQE K D FP +++L Y++ T GQK Sbjct: 1 MRIATWNVNSVRQRIEHLVTWLKECSPDIVCLQEIKCTDDAFPRLEIEALGYNVVTHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 ++NGVA+LSK E + L GD DV ARF+E ++ +RI LYLP+GNP + K Sbjct: 61 TFNGVALLSKLPFDETRSGLDGDVEDVHARFLEGVVSLKHGVVRIACLYLPNGNPPNTEK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W+ R + +RL+ EEPLI AGD+N+IP D NP W DA F E R+SF Sbjct: 121 YPYKLKWMSRLRDYTRERLKTEEPLILAGDFNVIPAAADVSNPEAWVEDALFRPETRESF 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q L +G TDA+RA D Y+FWDY A +W KN GIRIDH++LSP+A+ L ID+ Sbjct: 181 QALLGLGLTDALRAVTDAPGQYTFWDYQAGAWQKNAGIRIDHLLLSPQASDRLVEVGIDS 240 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 R W KPSDH PV D+ Sbjct: 241 YVRAWEKPSDHVPVWADFDL 260 >gi|126725257|ref|ZP_01741099.1| exodeoxyribonuclease III [Rhodobacterales bacterium HTCC2150] gi|126704461|gb|EBA03552.1| exodeoxyribonuclease III [Rhodobacterales bacterium HTCC2150] Length = 259 Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats. Identities = 124/259 (47%), Positives = 168/259 (64%), Gaps = 1/259 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A++N+N I+ARI+ L W+ E PD++ LQE K+ D+NFP E + + Y +ET GQK Sbjct: 1 MKIASFNINGIKARINALPEWLAEAKPDVVLLQEIKSVDENFPRELFEDMGYTVETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 S+NGVAILS+ +I LPGDD D QAR+IEAT T +R+ LYLP+GNP+ K Sbjct: 61 SFNGVAILSRLPLEDITRGLPGDDTDEQARWIEATVMGKTP-VRVCGLYLPNGNPVPGPK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 YD K++W+ R A + LE+EEP + AGDYNIIPQ D +P +W DA E R ++ Sbjct: 120 YDYKLAWMDRLQARAVELLEIEEPFVVAGDYNIIPQDEDAKHPEVWVEDALARPESRAAY 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 ++L N+GFT+ R + YSFWDY +W KN GIRIDH + SPE L+ +ID+ Sbjct: 180 RRLLNLGFTEVFRTRNPGPGHYSFWDYQRGAWDKNDGIRIDHFLASPECADLVTDCQIDS 239 Query: 244 KPRGWTKPSDHTPVIVSLD 262 RG KPSDH PV + LD Sbjct: 240 YVRGREKPSDHVPVWIELD 258 >gi|192291575|ref|YP_001992180.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris TIE-1] gi|192285324|gb|ACF01705.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris TIE-1] Length = 263 Score = 230 bits (585), Expect = 2e-58, Method: Composition-based stats. Identities = 130/260 (50%), Positives = 175/260 (67%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+R R+ +L +W+++ PD++CLQE K D+ FP E +++L Y++ T GQK Sbjct: 1 MRIATWNVNSVRQRLDHLVSWLQDCQPDVVCLQEIKCVDEAFPREPIEALGYNVVTHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 ++NGVA+LSKY E L GD+ DV ARF+E ++ +R+ LYLP+GNP+ S K Sbjct: 61 TFNGVALLSKYPLEEANPGLAGDESDVHARFLEGVVSLKHGVVRVACLYLPNGNPVGSEK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+SW+ R +A QRL+ EEPLI AGD+N+IPQ D +NP W DA F E R+SF Sbjct: 121 YPYKLSWMARLRDYAQQRLKTEEPLILAGDFNVIPQAEDVHNPAAWTEDALFRPETRESF 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q L +G TDA+RAT D Y+FWDY A +W KN GIRIDH++LSP+A L ID+ Sbjct: 181 QTLLGLGLTDALRATTDAPGQYTFWDYQAGAWQKNWGIRIDHLLLSPQAADRLRHVGIDS 240 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 R W KPSDH PV D+ Sbjct: 241 YVRNWEKPSDHVPVWADFDL 260 >gi|254469887|ref|ZP_05083292.1| exodeoxyribonuclease III [Pseudovibrio sp. JE062] gi|211961722|gb|EEA96917.1| exodeoxyribonuclease III [Pseudovibrio sp. JE062] Length = 260 Score = 229 bits (584), Expect = 3e-58, Method: Composition-based stats. Identities = 122/258 (47%), Positives = 170/258 (65%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A+WN+N ++AR+ + W++E PD+ C QE K+ D+NFP + L Y++ET GQK Sbjct: 1 MKIASWNINGVKARLETVLKWLEEEQPDVACFQEIKSVDENFPRAPFEELGYNLETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVAILSK E+ LPGD+ D QAR+IEA N + +R+G LYLP+GNP+ + K Sbjct: 61 GFNGVAILSKRPFEEVNRRLPGDEQDEQARYIEAVIAGNNEPIRVGCLYLPNGNPVETEK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W+ R + A ++LE EE + GDYN+IP+P D P W DA F E RQ F Sbjct: 121 FPYKLRWMDRLHKHAEKQLEKEEAFLLVGDYNVIPEPEDAKKPEAWVGDALFRPESRQRF 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + L N+GFT+A+RAT+ Y+FWDY A +W ++ GIRIDH++LSPEA ++ ID Sbjct: 181 RALLNLGFTEAVRATNSNAGTYTFWDYQAGAWQRDNGIRIDHLLLSPEAARIMQGVGIDK 240 Query: 244 KPRGWTKPSDHTPVIVSL 261 RGW KPSDH PV V L Sbjct: 241 HVRGWEKPSDHVPVWVEL 258 >gi|299134949|ref|ZP_07028140.1| exodeoxyribonuclease III [Afipia sp. 1NLS2] gi|298589926|gb|EFI50130.1| exodeoxyribonuclease III [Afipia sp. 1NLS2] Length = 260 Score = 229 bits (583), Expect = 4e-58, Method: Composition-based stats. Identities = 128/259 (49%), Positives = 171/259 (66%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+R R+ +L W+KE PD++CLQE K D+ FP E +++L Y++ T GQK Sbjct: 1 MRIATWNVNSVRQRLDHLLTWLKEREPDLVCLQEIKCLDEAFPREPIEALGYNVVTHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 ++NGVA+LSKY+ E L GD D+ ARF+E + T R+ LYLP+GNP+ + K Sbjct: 61 TFNGVALLSKYRFEETRPQLAGDPEDLHARFLEGVVSHKDGTFRLACLYLPNGNPVNTEK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W+ R + +A +RL+ EEP + AGD+N+IP P D YNP W DA F + R F Sbjct: 121 YPYKLRWMDRLIEYARERLKSEEPFVLAGDFNVIPTPADVYNPQAWLEDALFLPQTRDKF 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q L N+G TDA RAT D Y+FWDY A +W KN GIRIDH+++SP A+ L +A ID Sbjct: 181 QTLLNLGLTDAFRATSDAPRQYTFWDYQAGAWQKNNGIRIDHLLMSPPASDRLKAAGIDK 240 Query: 244 KPRGWTKPSDHTPVIVSLD 262 RGW K SDH PV LD Sbjct: 241 HVRGWEKASDHVPVWADLD 259 >gi|294852226|ref|ZP_06792899.1| exodeoxyribonuclease III [Brucella sp. NVSL 07-0026] gi|294820815|gb|EFG37814.1| exodeoxyribonuclease III [Brucella sp. NVSL 07-0026] Length = 260 Score = 229 bits (583), Expect = 4e-58, Method: Composition-based stats. Identities = 141/260 (54%), Positives = 190/260 (73%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+N ++ARI NL W++E++PDI+CLQE K+ D+ FP +++L YH+ET GQK Sbjct: 1 MKIATWNINGVKARIDNLQHWLRESSPDIVCLQEIKSVDEQFPRLEIEALGYHVETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVA+LSK P EI LPGDD D QARFIE ++ +T +R+ +LYLP+GNPI + K Sbjct: 61 GFNGVALLSKKSPDEINKGLPGDDSDEQARFIEGIYSTDTGVVRVVSLYLPNGNPIDTEK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+SW++R +A +RL LEEPL+ AGDYN+IP+P NP W DA F + RQ+F Sbjct: 121 FPYKLSWMQRLENWAKKRLTLEEPLVLAGDYNVIPEPVGARNPQAWLGDALFQPQSRQAF 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 ++L+N+GFTDAIRA+ D +YSFWDY A +W KN GIRIDH+MLSPEAT+ SA I+ Sbjct: 181 RRLENLGFTDAIRASTDESGVYSFWDYQAGAWQKNNGIRIDHLMLSPEATNRFISANIEK 240 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 R W KPSDH PV V+L + Sbjct: 241 HVRAWEKPSDHVPVTVTLAV 260 >gi|241204407|ref|YP_002975503.1| exodeoxyribonuclease III Xth [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858297|gb|ACS55964.1| exodeoxyribonuclease III Xth [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 263 Score = 229 bits (583), Expect = 4e-58, Method: Composition-based stats. Identities = 142/260 (54%), Positives = 192/260 (73%), Gaps = 1/260 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+N ++ARI NL W+K+++PDI+CLQE KT D+ FP +++L YH+ET GQK Sbjct: 1 MKIATWNINGVKARIDNLTQWLKDSDPDIVCLQEIKTVDEGFPRLEIEALGYHVETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL-RIGNLYLPHGNPITST 122 +NGVAILSK P E+ LPGD LD QARF+EA FT++ + R+ LYLP+GNP+ + Sbjct: 61 GFNGVAILSKNSPFEVNRGLPGDPLDEQARFLEAAFTLSDTRILRVCCLYLPNGNPVETE 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 KY K++W++R FA++RL EE L+ AGDYN+IP+PHDC++P +WENDA F + R++ Sbjct: 121 KYPYKLAWMERLRTFAAERLAYEEMLVLAGDYNVIPEPHDCFDPKVWENDALFLPQTREA 180 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F++L+N+G TDA+RAT D LYSFWDY A +W KN GIRIDH++LSPEA + SA I+ Sbjct: 181 FRRLENLGLTDALRATTDATQLYSFWDYQAGAWPKNNGIRIDHLLLSPEAADRMTSAAIE 240 Query: 243 TKPRGWTKPSDHTPVIVSLD 262 R W KPSDH PVI D Sbjct: 241 KHVRAWEKPSDHVPVIAYFD 260 >gi|163746501|ref|ZP_02153859.1| exodeoxyribonuclease III, putative [Oceanibulbus indolifex HEL-45] gi|161380386|gb|EDQ04797.1| exodeoxyribonuclease III, putative [Oceanibulbus indolifex HEL-45] Length = 260 Score = 229 bits (583), Expect = 4e-58, Method: Composition-based stats. Identities = 125/260 (48%), Positives = 161/260 (61%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A++N+N I+AR L W+ E PD++ LQE K+ D+ FP E L+ Y++ET GQK Sbjct: 1 MKIASFNINGIKARAAALPEWLDEAQPDVVVLQEIKSVDEAFPREMLEERGYNVETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 S+NGVAILSK ++ LPGDD D QAR+IEAT + LR+ LYLP+GNP+ K Sbjct: 61 SFNGVAILSKLPLEDVTRGLPGDDEDDQARWIEATVVGDDMALRVCGLYLPNGNPVPGPK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 YD K++W+ R A L E P + AGDYNIIPQ D P W DA F E R ++ Sbjct: 121 YDYKLAWMARLQARAEALLAEETPFLMAGDYNIIPQAEDAAKPDSWREDALFRPESRAAW 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 ++L N+G TDA RA YSFWDY A +W++N GIRIDH +LSP L +ID Sbjct: 181 RRLVNLGLTDAFRARTQGPGHYSFWDYQAGAWNRNNGIRIDHFLLSPTVADRLRDCQIDR 240 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 RG KPSDH PV V L I Sbjct: 241 DVRGRDKPSDHVPVWVELAI 260 >gi|150396373|ref|YP_001326840.1| exodeoxyribonuclease III Xth [Sinorhizobium medicae WSM419] gi|150027888|gb|ABR60005.1| exodeoxyribonuclease III Xth [Sinorhizobium medicae WSM419] Length = 263 Score = 228 bits (582), Expect = 5e-58, Method: Composition-based stats. Identities = 142/258 (55%), Positives = 183/258 (70%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+N ++AR+ L W+KE+NPDI CLQE K+ D FP ++SL YH+ET GQK Sbjct: 1 MKIATWNINGVKARLDGLVGWLKESNPDIACLQEIKSIDDAFPRGEIESLGYHVETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVA+LSK +P E+ LPGD D Q+RFIE F++N LR+ LYLP+GNP+ + K Sbjct: 61 GFNGVALLSKLRPDEVNRGLPGDASDEQSRFIEGVFSVNGGALRVCCLYLPNGNPVETEK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K++W++R FA QRL LEEPLI AGDYN+IP+PHDC++ +W NDA + E R +F Sbjct: 121 YPYKLAWMRRLAAFAEQRLMLEEPLILAGDYNVIPEPHDCWDVKVWRNDALYLPETRAAF 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 ++L+N+GFTDA+RAT D LYSFWDY A W KN GIRIDH+MLSPEA L S I+ Sbjct: 181 RRLRNLGFTDAVRATSDEAPLYSFWDYQAGCWPKNLGIRIDHLMLSPEAADKLVSTSIEK 240 Query: 244 KPRGWTKPSDHTPVIVSL 261 R W KPSDH PV Sbjct: 241 HVRSWEKPSDHVPVTAEF 258 >gi|85703273|ref|ZP_01034377.1| exodeoxyribonuclease III [Roseovarius sp. 217] gi|85672201|gb|EAQ27058.1| exodeoxyribonuclease III [Roseovarius sp. 217] Length = 260 Score = 228 bits (582), Expect = 5e-58, Method: Composition-based stats. Identities = 125/259 (48%), Positives = 165/259 (63%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+N+N I+ARI L AW+ E PD++ LQE K+ D FP E + L Y++ET GQK Sbjct: 1 MKIATFNINGIKARIDALPAWLDEAAPDVVLLQEIKSVDDGFPREIFEDLGYNVETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVAILSK ++ LPGDD D QAR+IEAT + + LR+ LYLP+GNP K Sbjct: 61 GFNGVAILSKRPLEDVTRGLPGDDTDEQARWIEATVMGDHRALRLCGLYLPNGNPTPGPK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 YD K++W++R A L EEP++ GDYNIIPQ D P W DA E R +F Sbjct: 121 YDYKLAWMERLQARARDLLASEEPVLMGGDYNIIPQDEDAARPEAWREDALALPESRAAF 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +++ N+GFT+A RA Y+FWDY A +W+KN GIRIDH +LSP+A LL ID Sbjct: 181 RRILNLGFTEAFRARVQGPGHYTFWDYQAGAWNKNDGIRIDHFLLSPQAADLLTDCGIDK 240 Query: 244 KPRGWTKPSDHTPVIVSLD 262 + R KPSDH P+ V +D Sbjct: 241 EIRARDKPSDHVPLWVEID 259 >gi|23501759|ref|NP_697886.1| exodeoxyribonuclease III [Brucella suis 1330] gi|161618833|ref|YP_001592720.1| exodeoxyribonuclease III (xth) [Brucella canis ATCC 23365] gi|225627361|ref|ZP_03785398.1| exodeoxyribonuclease III Xth [Brucella ceti str. Cudo] gi|225852385|ref|YP_002732618.1| exodeoxyribonuclease III Xth [Brucella melitensis ATCC 23457] gi|254701637|ref|ZP_05163465.1| exodeoxyribonuclease III Xth [Brucella suis bv. 5 str. 513] gi|254704180|ref|ZP_05166008.1| exodeoxyribonuclease III Xth [Brucella suis bv. 3 str. 686] gi|254706917|ref|ZP_05168745.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis M163/99/10] gi|254709975|ref|ZP_05171786.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis B2/94] gi|254713975|ref|ZP_05175786.1| exodeoxyribonuclease III Xth [Brucella ceti M644/93/1] gi|256031468|ref|ZP_05445082.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis M292/94/1] gi|256044546|ref|ZP_05447450.1| exodeoxyribonuclease III Xth [Brucella melitensis bv. 1 str. Rev.1] gi|256060978|ref|ZP_05451136.1| exodeoxyribonuclease III Xth [Brucella neotomae 5K33] gi|256113411|ref|ZP_05454260.1| exodeoxyribonuclease III Xth [Brucella melitensis bv. 3 str. Ether] gi|256159594|ref|ZP_05457356.1| exodeoxyribonuclease III Xth [Brucella ceti M490/95/1] gi|256254874|ref|ZP_05460410.1| exodeoxyribonuclease III Xth [Brucella ceti B1/94] gi|256264117|ref|ZP_05466649.1| exodeoxyribonuclease III [Brucella melitensis bv. 2 str. 63/9] gi|256369301|ref|YP_003106809.1| exodeoxyribonuclease III [Brucella microti CCM 4915] gi|260168602|ref|ZP_05755413.1| exodeoxyribonuclease III [Brucella sp. F5/99] gi|261222058|ref|ZP_05936339.1| exodeoxyribonuclease III Xth [Brucella ceti B1/94] gi|261314381|ref|ZP_05953578.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis M163/99/10] gi|261317523|ref|ZP_05956720.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis B2/94] gi|261321730|ref|ZP_05960927.1| exodeoxyribonuclease III Xth [Brucella ceti M644/93/1] gi|261324980|ref|ZP_05964177.1| exodeoxyribonuclease III Xth [Brucella neotomae 5K33] gi|261752190|ref|ZP_05995899.1| exodeoxyribonuclease III Xth [Brucella suis bv. 5 str. 513] gi|261754849|ref|ZP_05998558.1| exodeoxyribonuclease III Xth [Brucella suis bv. 3 str. 686] gi|265988558|ref|ZP_06101115.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis M292/94/1] gi|265990972|ref|ZP_06103529.1| exodeoxyribonuclease III Xth [Brucella melitensis bv. 1 str. Rev.1] gi|265994809|ref|ZP_06107366.1| exodeoxyribonuclease III Xth [Brucella melitensis bv. 3 str. Ether] gi|265998023|ref|ZP_06110580.1| exodeoxyribonuclease III Xth [Brucella ceti M490/95/1] gi|23347687|gb|AAN29801.1| exodeoxyribonuclease III [Brucella suis 1330] gi|161335644|gb|ABX61949.1| exodeoxyribonuclease III (xth) [Brucella canis ATCC 23365] gi|225617366|gb|EEH14411.1| exodeoxyribonuclease III Xth [Brucella ceti str. Cudo] gi|225640750|gb|ACO00664.1| exodeoxyribonuclease III Xth [Brucella melitensis ATCC 23457] gi|255999461|gb|ACU47860.1| exodeoxyribonuclease III [Brucella microti CCM 4915] gi|260920642|gb|EEX87295.1| exodeoxyribonuclease III Xth [Brucella ceti B1/94] gi|261294420|gb|EEX97916.1| exodeoxyribonuclease III Xth [Brucella ceti M644/93/1] gi|261296746|gb|EEY00243.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis B2/94] gi|261300960|gb|EEY04457.1| exodeoxyribonuclease III Xth [Brucella neotomae 5K33] gi|261303407|gb|EEY06904.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis M163/99/10] gi|261741943|gb|EEY29869.1| exodeoxyribonuclease III Xth [Brucella suis bv. 5 str. 513] gi|261744602|gb|EEY32528.1| exodeoxyribonuclease III Xth [Brucella suis bv. 3 str. 686] gi|262552491|gb|EEZ08481.1| exodeoxyribonuclease III Xth [Brucella ceti M490/95/1] gi|262765922|gb|EEZ11711.1| exodeoxyribonuclease III Xth [Brucella melitensis bv. 3 str. Ether] gi|263001756|gb|EEZ14331.1| exodeoxyribonuclease III Xth [Brucella melitensis bv. 1 str. Rev.1] gi|263094335|gb|EEZ18180.1| exodeoxyribonuclease III [Brucella melitensis bv. 2 str. 63/9] gi|264660755|gb|EEZ31016.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis M292/94/1] gi|326408891|gb|ADZ65956.1| exodeoxyribonuclease III Xth [Brucella melitensis M28] Length = 260 Score = 228 bits (582), Expect = 5e-58, Method: Composition-based stats. Identities = 142/260 (54%), Positives = 191/260 (73%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+N ++ARI NL W++E++PDI+CLQE K+ D+ FP +++L YH+ET GQK Sbjct: 1 MKIATWNINGVKARIDNLQHWLRESSPDIVCLQEIKSVDEQFPRLEIEALGYHVETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVA+LSK P EI LPGDD D QARFIE ++ +T +R+ +LYLP+GNPI + K Sbjct: 61 GFNGVALLSKKSPDEINKGLPGDDSDEQARFIEGIYSTDTGVVRVVSLYLPNGNPIDTEK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+SW++R +A +RL LEEPL+ AGDYN+IP+P D NP W DA F + RQ+F Sbjct: 121 FPYKLSWMQRLENWAKKRLTLEEPLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAF 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 ++L+N+GFTDAIRA+ D +YSFWDY A +W KN GIRIDH+MLSPEAT+ SA I+ Sbjct: 181 RRLENLGFTDAIRASTDESGVYSFWDYQAGAWQKNNGIRIDHLMLSPEATNRFISANIEK 240 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 R W KPSDH PV V+L + Sbjct: 241 HVRAWEKPSDHVPVTVTLAV 260 >gi|254718977|ref|ZP_05180788.1| exodeoxyribonuclease III Xth [Brucella sp. 83/13] gi|265983967|ref|ZP_06096702.1| exodeoxyribonuclease III Xth [Brucella sp. 83/13] gi|264662559|gb|EEZ32820.1| exodeoxyribonuclease III Xth [Brucella sp. 83/13] Length = 260 Score = 228 bits (582), Expect = 5e-58, Method: Composition-based stats. Identities = 141/260 (54%), Positives = 190/260 (73%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+N ++ARI NL W++E++PDI+CLQE K+ D+ FP +++L YH+ET GQK Sbjct: 1 MKIATWNINGVKARIDNLQHWLRESSPDIVCLQEIKSVDEQFPRLEIEALGYHVETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVA+LSK P EI LPGDD D QARFIE ++ + +R+ +LYLP+GNPI + K Sbjct: 61 GFNGVALLSKKSPDEINKGLPGDDSDEQARFIEGVYSTDNGVVRVVSLYLPNGNPIDTEK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+SW++R +A +RL LEEPL+ AGDYN+IP+P D NP W DA F + RQ+F Sbjct: 121 FPYKLSWMQRLENWAKERLTLEEPLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAF 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 ++L+N+GFTDAIRA+ D +YSFWDY A +W KN GIRIDH+MLSPEAT+ SA I+ Sbjct: 181 RRLENLGFTDAIRASTDESGVYSFWDYQAGAWQKNNGIRIDHLMLSPEATNRFISANIEK 240 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 R W KPSDH PV V+L + Sbjct: 241 HVRAWEKPSDHVPVTVTLAV 260 >gi|298291878|ref|YP_003693817.1| exodeoxyribonuclease III [Starkeya novella DSM 506] gi|296928389|gb|ADH89198.1| exodeoxyribonuclease III [Starkeya novella DSM 506] Length = 262 Score = 228 bits (582), Expect = 5e-58, Method: Composition-based stats. Identities = 128/258 (49%), Positives = 171/258 (66%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS++ R+ + AW+ E PD++CLQE K D+ FP E +SL Y++ GQK Sbjct: 1 MRIATWNVNSVKQRLEHAVAWLGETRPDVVCLQEIKCVDEAFPREAFESLGYNVAVHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVA+LS+ E+ + LPGDD DVQ+RFIE + RI +YLP+GNP+ + K Sbjct: 61 GFNGVAVLSRLPFDEVSSGLPGDDEDVQSRFIEVVVSTPEGVARICGIYLPNGNPVDTEK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K++W+KR + RL EEPLI GDYN+IP+P D NP W NDA F + R +F Sbjct: 121 YPYKLNWMKRLKAHVANRLAYEEPLIVCGDYNVIPEPVDAANPAAWVNDALFLPQTRSAF 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 ++L ++G T+A+RAT D LYSFWDY A +W KN GIRIDH++LSP+A L + ID Sbjct: 181 RELIHLGMTEAVRATTDEPGLYSFWDYQAGAWQKNNGIRIDHLLLSPQAADRLKAVGIDK 240 Query: 244 KPRGWTKPSDHTPVIVSL 261 R W KPSDH PV V L Sbjct: 241 HVRAWEKPSDHVPVWVDL 258 >gi|27379872|ref|NP_771401.1| exonuclease III [Bradyrhizobium japonicum USDA 110] gi|27353025|dbj|BAC50026.1| exonuclease III [Bradyrhizobium japonicum USDA 110] Length = 273 Score = 228 bits (582), Expect = 5e-58, Method: Composition-based stats. Identities = 132/260 (50%), Positives = 174/260 (66%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + VATWNVNS+R RI L W+KE PDI+CLQE K D+ FP +++L Y++ T GQK Sbjct: 11 IRVATWNVNSVRQRIDLLLTWLKECQPDIVCLQEIKCVDEAFPRLEIEALGYNVVTHGQK 70 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 ++NGVA+LSK + E + L GDD D ARF+E T+ LRI LYLP+GNP+ + K Sbjct: 71 TFNGVALLSKLRFDETKSGLAGDDEDAHARFLEGVVTLKHGVLRIACLYLPNGNPVGTEK 130 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W+ R L ++ +RL+ EEPLI AGD+N+IP D +NP W DA F E R+SF Sbjct: 131 YPYKLKWMSRLLEYSKERLKTEEPLILAGDFNVIPHARDVHNPAAWTEDALFKTETRESF 190 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q L +G TDA+RA D LY+FWDY A +W KN G+RIDH++LSP+A+ L + ID+ Sbjct: 191 QSLLGLGLTDALRAVTDEPGLYTFWDYQAGAWQKNHGLRIDHLLLSPQASDRLANVGIDS 250 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 R W KPSDH PV LD+ Sbjct: 251 YVRAWEKPSDHVPVWADLDL 270 >gi|307946864|ref|ZP_07662199.1| exodeoxyribonuclease III [Roseibium sp. TrichSKD4] gi|307770528|gb|EFO29754.1| exodeoxyribonuclease III [Roseibium sp. TrichSKD4] Length = 260 Score = 228 bits (581), Expect = 6e-58, Method: Composition-based stats. Identities = 127/258 (49%), Positives = 176/258 (68%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+N ++AR+ + AW++E P+I CLQE K+ D+NFP E ++ L Y+++T GQK Sbjct: 1 MKIATWNINGVKARLDTVLAWLQEAEPEIACLQEIKSVDENFPREAIEELGYNVKTHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 S+NGVA+LS ++ LPGDD D QARFIE T + + +R+G LYLP+GNP+ + K Sbjct: 61 SFNGVALLSNRPLEDVQRGLPGDDSDEQARFIEGTVSTDNGVVRVGCLYLPNGNPLGTEK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W+ R + A +RL+ E P + GDYN+IP P D NP W NDA F E RQ F Sbjct: 121 FPYKLGWMDRLIAHAKRRLDDEIPYLLLGDYNVIPDPMDAKNPENWGNDALFQPESRQKF 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + L ++GFT+A+RA D ++FWDY A +W KN GIRIDHI+LSP+A+ L+ ID Sbjct: 181 RTLTHLGFTEAVRACTDAPETFTFWDYQAGAWQKNNGIRIDHILLSPQASDLMAGCGIDK 240 Query: 244 KPRGWTKPSDHTPVIVSL 261 RGW KPSDH PV V+L Sbjct: 241 HVRGWEKPSDHVPVWVNL 258 >gi|254693606|ref|ZP_05155434.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 3 str. Tulya] gi|261213872|ref|ZP_05928153.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 3 str. Tulya] gi|260915479|gb|EEX82340.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 3 str. Tulya] Length = 260 Score = 228 bits (581), Expect = 6e-58, Method: Composition-based stats. Identities = 142/260 (54%), Positives = 191/260 (73%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+N ++ARI NL W++E++PDI+CLQE K+ D+ FP +++L YH+ET GQK Sbjct: 1 MKIATWNINGVKARIDNLQHWLRESSPDIVCLQEIKSVDEQFPRLEIEALGYHVETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVA+LSK P EI LPGDD D QARFIE ++ +T +R+ +LYLP+GNPI + K Sbjct: 61 CFNGVALLSKKSPDEINKGLPGDDSDEQARFIEGIYSTDTGVVRVVSLYLPNGNPIDTEK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+SW++R +A +RL LEEPL+ AGDYN+IP+P D NP W DA F + RQ+F Sbjct: 121 FPYKLSWMQRLENWAKKRLTLEEPLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAF 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 ++L+N+GFTDAIRA+ D +YSFWDY A +W KN GIRIDH+MLSPEAT+ SA I+ Sbjct: 181 RRLENLGFTDAIRASTDESGVYSFWDYQAGAWQKNNGIRIDHLMLSPEATNRFISANIEK 240 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 R W KPSDH PV V+L + Sbjct: 241 HVRAWEKPSDHVPVTVTLAV 260 >gi|209885397|ref|YP_002289254.1| exodeoxyribonuclease III [Oligotropha carboxidovorans OM5] gi|209873593|gb|ACI93389.1| exodeoxyribonuclease III [Oligotropha carboxidovorans OM5] Length = 260 Score = 228 bits (581), Expect = 7e-58, Method: Composition-based stats. Identities = 128/259 (49%), Positives = 171/259 (66%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+R R+ +L W+KE PD++CLQE K D+ FP E L++L Y++ T GQK Sbjct: 1 MRIATWNVNSVRQRLDHLVTWLKEREPDLVCLQEIKCLDEAFPREPLEALGYNVVTHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 ++NGVA+LSKY+ E L GD D+ ARF+E + T R+ LYLP+GNP+ + K Sbjct: 61 TFNGVALLSKYRFEETRPQLAGDPDDLHARFLEGVVSHKDGTFRLACLYLPNGNPVNTEK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+SW+ R + +A +R++ EEP + AGD+N+IP P D YNP W DA F + R F Sbjct: 121 YPYKLSWMDRLITYARERIKSEEPFVLAGDFNVIPTPADVYNPQAWLGDALFLPQTRDKF 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q L N+G TDA+RAT D Y+FWDY A +W KN GIRIDH+++SP A L + ID Sbjct: 181 QTLLNLGLTDALRATTDAPQQYTFWDYQAGAWQKNNGIRIDHLLMSPPAADRLQAVGIDK 240 Query: 244 KPRGWTKPSDHTPVIVSLD 262 RGW K SDH PV LD Sbjct: 241 HVRGWEKASDHVPVWADLD 259 >gi|327191803|gb|EGE58803.1| exodeoxyribonuclease III protein [Rhizobium etli CNPAF512] Length = 263 Score = 228 bits (580), Expect = 9e-58, Method: Composition-based stats. Identities = 142/260 (54%), Positives = 192/260 (73%), Gaps = 1/260 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+N ++ARI NL W+K+++PDI+CLQE KT D+ FP +++L YH+ET GQK Sbjct: 1 MKIATWNINGVKARIDNLTQWLKDSDPDIVCLQEIKTIDEGFPRLEIEALGYHVETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL-RIGNLYLPHGNPITST 122 +NGVAILSK P E+ LPGD LD QARF+EA FT+ + R+ +YLP+GNP+ + Sbjct: 61 GFNGVAILSKSSPSEVNRGLPGDALDEQARFLEAVFTLPDTRILRVCCIYLPNGNPVETE 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 KY K++W++R FA++RL+ EE L+ AGDYN+IP+PHDC++P +WENDA F + R++ Sbjct: 121 KYPYKLAWMERLRSFAAERLDYEEMLVLAGDYNVIPEPHDCFDPKVWENDALFLPQTREA 180 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F+KL+N+G TDA+RAT D LYSFWDY A +W KN GIRIDH++LSPEA + SA I+ Sbjct: 181 FRKLENLGLTDAVRATTDATQLYSFWDYQAGAWPKNNGIRIDHLLLSPEAADRMTSAAIE 240 Query: 243 TKPRGWTKPSDHTPVIVSLD 262 R W KPSDH PVI D Sbjct: 241 KHVRAWEKPSDHVPVIAYFD 260 >gi|294677951|ref|YP_003578566.1| exodeoxyribonuclease III [Rhodobacter capsulatus SB 1003] gi|294476771|gb|ADE86159.1| exodeoxyribonuclease III-1 [Rhodobacter capsulatus SB 1003] Length = 259 Score = 228 bits (580), Expect = 9e-58, Method: Composition-based stats. Identities = 127/259 (49%), Positives = 164/259 (63%), Gaps = 1/259 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+N+N I+AR L AW++ PD++ LQE K+ D+ FP E L Y + T GQK Sbjct: 1 MKIATFNINGIKARAEALPAWLRAAEPDVVLLQEIKSTDEAFPQEVLDGTGYTVHTHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 S+NGVAILS+ ++ LPGDD D QAR+IEAT I T+ +R+ LYLP+GNP K Sbjct: 61 SFNGVAILSRLPLEDVTRGLPGDDSDDQARWIEAT-VIGTRAVRVCGLYLPNGNPAPGPK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 YD K++W+ R L EEPL+FAGDYN+IPQ D P W DA E R +F Sbjct: 120 YDYKLAWMARMQARVETLLRSEEPLVFAGDYNVIPQDEDAAKPESWRADALALPETRAAF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +++ N+G TDA RA YSFWDY A +W KN GIRIDH++LSP+A LL A ID Sbjct: 180 RRIVNLGLTDAFRARVPGPGQYSFWDYQAGAWQKNNGIRIDHLLLSPQAADLLRDAGIDK 239 Query: 244 KPRGWTKPSDHTPVIVSLD 262 + R KPSDH PV + LD Sbjct: 240 EVRAGEKPSDHVPVWIDLD 258 >gi|190891504|ref|YP_001978046.1| exodeoxyribonuclease III protein [Rhizobium etli CIAT 652] gi|190696783|gb|ACE90868.1| exodeoxyribonuclease III protein [Rhizobium etli CIAT 652] Length = 263 Score = 228 bits (580), Expect = 1e-57, Method: Composition-based stats. Identities = 141/260 (54%), Positives = 191/260 (73%), Gaps = 1/260 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+N ++ARI NL W+K+++PDI+CLQE KT D+ FP +++L YH+ET GQK Sbjct: 1 MKIATWNINGVKARIDNLTQWLKDSDPDIVCLQEIKTIDEGFPRLEIEALGYHVETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL-RIGNLYLPHGNPITST 122 +NGVAILSK P E+ LPGD LD QARF+EA FT+ + R+ +YLP+GNP+ + Sbjct: 61 GFNGVAILSKSSPSEVNRGLPGDALDEQARFLEAVFTLPDTRILRVCCIYLPNGNPVETE 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 KY K++W++R FA++RL EE L+ AGDYN+IP+PHDC++P +WENDA F + R++ Sbjct: 121 KYPYKLAWMERLRSFAAERLAYEEMLVLAGDYNVIPEPHDCFDPKVWENDALFLPQTREA 180 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F++L+N+G TDA+RAT D LYSFWDY A +W KN GIRIDH++LSPEA + SA I+ Sbjct: 181 FRRLENLGLTDAVRATTDATRLYSFWDYQAGAWPKNNGIRIDHLLLSPEAADRMTSAAIE 240 Query: 243 TKPRGWTKPSDHTPVIVSLD 262 R W KPSDH PVI D Sbjct: 241 KHVRAWEKPSDHVPVIAYFD 260 >gi|163759458|ref|ZP_02166543.1| exodeoxyribonuclease III [Hoeflea phototrophica DFL-43] gi|162283055|gb|EDQ33341.1| exodeoxyribonuclease III [Hoeflea phototrophica DFL-43] Length = 260 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 143/258 (55%), Positives = 189/258 (73%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+N ++ARI NL AW++E++PDI CLQE K+ D+ FP L++L YH+ET GQK Sbjct: 1 MKIATWNINGVKARIENLQAWLRESDPDIACLQEIKSVDEGFPRLELEALGYHVETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVAILSK P E+ LPGDD D QARFIEA F+ ++ LR+ +LYLP+GNP+ + K Sbjct: 61 GFNGVAILSKQSPEEVNRGLPGDDTDEQARFIEAVFSKDSGVLRVVSLYLPNGNPVDTEK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W++R FA RL LEEPL+ AGDYN+IP+P DC+NP WE DA F E R +F Sbjct: 121 FPYKLRWMERLQAFAEDRLALEEPLVLAGDYNVIPEPVDCHNPKAWEGDALFRPESRTAF 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 ++L+N+GFTDA+R+ +D Y+FWDY A +W KN GIRIDH+MLSPEA L A ++ Sbjct: 181 RRLENLGFTDALRSANDQAETYTFWDYQAGAWPKNNGIRIDHLMLSPEAADNLEWANVEK 240 Query: 244 KPRGWTKPSDHTPVIVSL 261 RGW KPSDH PV +SL Sbjct: 241 HVRGWEKPSDHVPVAISL 258 >gi|116251798|ref|YP_767636.1| exodeoxyribonuclease III [Rhizobium leguminosarum bv. viciae 3841] gi|115256446|emb|CAK07530.1| putative exodeoxyribonuclease III [Rhizobium leguminosarum bv. viciae 3841] Length = 263 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 142/260 (54%), Positives = 191/260 (73%), Gaps = 1/260 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+N ++ARI NL W+K++NPDI+CLQE KT D+ FP +++L YH+ET GQK Sbjct: 1 MKIATWNINGVKARIDNLTQWLKDSNPDIVCLQEIKTVDEGFPRLEIEALGYHVETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL-RIGNLYLPHGNPITST 122 +NGVAILSK P E+ LPGD LD QARF+EA FT++ + R+ +YLP+GNP+ + Sbjct: 61 GFNGVAILSKSSPFEVNRGLPGDPLDEQARFLEAAFTLSDMRILRVCCIYLPNGNPVETE 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 KY K++W++R FA++RL EE LI AGDYN+IP+PHDC++P +WENDA F + R++ Sbjct: 121 KYPYKLAWMERLQTFAAERLAYEEMLILAGDYNVIPEPHDCFDPRVWENDALFLPQTREA 180 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F++L+N+G TDA+RAT D YSFWDY A +W KN GIRIDH++LSPEA + SA I+ Sbjct: 181 FRRLENLGLTDAVRATTDATQFYSFWDYQAGAWPKNNGIRIDHLLLSPEAADRMTSAAIE 240 Query: 243 TKPRGWTKPSDHTPVIVSLD 262 R W KPSDH PVI D Sbjct: 241 KHVRAWEKPSDHVPVIAYFD 260 >gi|90423996|ref|YP_532366.1| exodeoxyribonuclease III [Rhodopseudomonas palustris BisB18] gi|90106010|gb|ABD88047.1| Exodeoxyribonuclease III [Rhodopseudomonas palustris BisB18] Length = 267 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 132/264 (50%), Positives = 176/264 (66%), Gaps = 1/264 (0%) Query: 1 MSV-VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 M V + +ATWNVNS+R R+ +L W+K+ PDI+CLQE K D+ FP E +++L Y++ T Sbjct: 1 MKVPMRIATWNVNSVRQRLDHLLVWLKDCAPDIVCLQEIKCVDEAFPREAIEALGYNVVT 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 GQK++NGVA+LSKY E L GDD D+ ARFIE ++ + +R+ LYLP+GNP Sbjct: 61 HGQKTFNGVALLSKYPLEEATPRLAGDDDDLHARFIEGVVSLKSGVVRVACLYLPNGNPP 120 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + KY K+ W+ R L +A +RL+ EEPLI AGD+N+IP P D YNP W DA F + Sbjct: 121 ETEKYAYKLKWMSRLLDYAKERLKTEEPLILAGDFNVIPAPGDVYNPAAWVGDALFKPQT 180 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R+SFQ L +G +DA+RA D Y+FWDY A +W KN GIRIDH++LSP+A L Sbjct: 181 RESFQALLGLGLSDALRAVTDAPSQYTFWDYQAGAWQKNWGIRIDHLLLSPQAADRLTGV 240 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 ID R W KPSDH PV + LD+ Sbjct: 241 GIDKHVRSWEKPSDHVPVWIDLDL 264 >gi|114707219|ref|ZP_01440117.1| exodeoxyribonuclease III [Fulvimarina pelagi HTCC2506] gi|114537415|gb|EAU40541.1| exodeoxyribonuclease III [Fulvimarina pelagi HTCC2506] Length = 260 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 129/258 (50%), Positives = 180/258 (69%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A+WN+N I+ARI L AW++E NPDI CLQE K++D+ FP + ++ L YH+ET GQK Sbjct: 1 MLIASWNINGIKARIDGLTAWLQERNPDIACLQEIKSQDETFPKKVIEDLGYHVETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVA+LSK +P + LPGD+ D QAR+IE + ++ LR+ ++YLP+GNP+ + K Sbjct: 61 GFNGVALLSKEKPESVRRGLPGDESDEQARYIEGLWQTDSGPLRVASIYLPNGNPLGTAK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 ++ K++W+ R R A L EE LI AGDYN+IPQP D ++P W NDA F E R + Sbjct: 121 FEYKLAWMDRLERHAEALLAHEERLILAGDYNVIPQPKDVHDPAAWLNDALFQPESRGNL 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 ++L ++GF DA+R T D LY+FWDY A +W KN GIRIDH++LSPEA +L S ID Sbjct: 181 RRLVHLGFADALRMTDDRAELYTFWDYQAGAWQKNNGIRIDHLLLSPEAQIVLRSVGIDK 240 Query: 244 KPRGWTKPSDHTPVIVSL 261 + R W KPSDH P++ L Sbjct: 241 QVRSWEKPSDHVPILAEL 258 >gi|62289818|ref|YP_221611.1| exodeoxyribonuclease III [Brucella abortus bv. 1 str. 9-941] gi|82699743|ref|YP_414317.1| AP endonuclease [Brucella melitensis biovar Abortus 2308] gi|254689123|ref|ZP_05152377.1| AP endonuclease [Brucella abortus bv. 6 str. 870] gi|254697256|ref|ZP_05159084.1| AP endonuclease [Brucella abortus bv. 2 str. 86/8/59] gi|254730155|ref|ZP_05188733.1| AP endonuclease [Brucella abortus bv. 4 str. 292] gi|256257372|ref|ZP_05462908.1| AP endonuclease [Brucella abortus bv. 9 str. C68] gi|260754622|ref|ZP_05866970.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 6 str. 870] gi|260757845|ref|ZP_05870193.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 4 str. 292] gi|260761668|ref|ZP_05874011.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 2 str. 86/8/59] gi|260883649|ref|ZP_05895263.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 9 str. C68] gi|62195950|gb|AAX74250.1| Xth-1, exodeoxyribonuclease III [Brucella abortus bv. 1 str. 9-941] gi|82615844|emb|CAJ10848.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth:Endonuclease/exonuclease/phosphatase family [Brucella melitensis biovar Abortus 2308] gi|260668163|gb|EEX55103.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 4 str. 292] gi|260672100|gb|EEX58921.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 2 str. 86/8/59] gi|260674730|gb|EEX61551.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 6 str. 870] gi|260873177|gb|EEX80246.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 9 str. C68] Length = 260 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 143/260 (55%), Positives = 192/260 (73%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+NS++ARI NL W++E++PDI+CLQE K+ D+ FP +++L YH+ET GQK Sbjct: 1 MKIATWNINSVKARIDNLQHWLRESSPDIVCLQEIKSVDEQFPRLEIEALGYHVETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVA+LSK P EI LPGDD D QARFIE ++ +T +R+ +LYLP+GNPI + K Sbjct: 61 GFNGVALLSKKSPDEINKGLPGDDSDEQARFIEGIYSTDTGVVRVVSLYLPNGNPIDTEK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+SW++R +A +RL LEEPL+ AGDYN+IP+P D NP W DA F + RQ+F Sbjct: 121 FPYKLSWMQRLENWAKKRLTLEEPLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAF 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 ++L+N+GFTDAIRA+ D +YSFWDY A +W KN GIRIDH+MLSPEAT+ SA I+ Sbjct: 181 RRLENLGFTDAIRASTDESGVYSFWDYQAGAWQKNNGIRIDHLMLSPEATNRFISANIEK 240 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 R W KPSDH PV V+L + Sbjct: 241 HVRAWEKPSDHVPVTVTLAV 260 >gi|86749875|ref|YP_486371.1| exodeoxyribonuclease III [Rhodopseudomonas palustris HaA2] gi|86572903|gb|ABD07460.1| Exodeoxyribonuclease III [Rhodopseudomonas palustris HaA2] Length = 276 Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats. Identities = 129/264 (48%), Positives = 176/264 (66%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + +ATWNVNS+R R+ +L +W+ E PD++CLQE K D+ FP E +++L Y++ T G Sbjct: 12 NDMRIATWNVNSVRQRLDHLVSWLNECAPDVVCLQEIKCVDEAFPREAIEALGYNVVTHG 71 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 QK++NGVA+LSKY E L GDD D ARF+E ++ +R+ LYLP+GNP+ S Sbjct: 72 QKTFNGVALLSKYPLEEATPRLAGDDDDTHARFLEGVVSLKRGVVRVACLYLPNGNPVES 131 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 KY K+ W+ R L + QRL+ EEPLI AGD+N+IPQP D +NP W +DA F + R+ Sbjct: 132 EKYPYKLRWMSRLLEYTQQRLKTEEPLILAGDFNVIPQPIDVHNPAGWVDDALFRPQTRE 191 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 SFQ L +G TDA+RA+ D Y+FWDY A +W KN G+RIDH++LSP+AT L + I Sbjct: 192 SFQALLGLGLTDALRASTDAPGQYTFWDYQAGAWQKNWGLRIDHLLLSPQATDRLRNVGI 251 Query: 242 DTKPRGWTKPSDHTPVIVSLDIPE 265 D R W KPSDH PV D+ Sbjct: 252 DAYVRNWEKPSDHVPVWADFDLDA 275 >gi|254500814|ref|ZP_05112965.1| exodeoxyribonuclease III [Labrenzia alexandrii DFL-11] gi|222436885|gb|EEE43564.1| exodeoxyribonuclease III [Labrenzia alexandrii DFL-11] Length = 260 Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 125/258 (48%), Positives = 169/258 (65%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+N ++AR+ + W+KE +PD+ C QE K+ D+NFP + + L Y++ET GQK Sbjct: 1 MKIATWNINGVKARLETVQEWLKEASPDVACFQEIKSVDENFPRQPFEDLGYNVETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVAILSK ++ LPG+D D QAR+IEAT T +R G LYLP+GNP+ + K Sbjct: 61 GFNGVAILSKTPLEDVERRLPGNDDDEQARYIEATVTHGDGVVRFGCLYLPNGNPLGTEK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W+ R L A +RL E P I GDYN+IP P D NP W +DA F E RQ F Sbjct: 121 FPYKLGWMDRLLVHAEKRLAEEVPFILLGDYNVIPDPVDAKNPENWTDDALFQPESRQKF 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + L ++G T+AIRA + ++FWDY A +W KN GIRIDHI++SP+A + ID Sbjct: 181 RALTHLGMTEAIRACTEAPETFTFWDYQAGAWQKNNGIRIDHILMSPQANDKMLGCGIDK 240 Query: 244 KPRGWTKPSDHTPVIVSL 261 RGW KPSDH PV V+L Sbjct: 241 HVRGWEKPSDHVPVWVTL 258 >gi|153009683|ref|YP_001370898.1| exodeoxyribonuclease III Xth [Ochrobactrum anthropi ATCC 49188] gi|151561571|gb|ABS15069.1| exodeoxyribonuclease III Xth [Ochrobactrum anthropi ATCC 49188] Length = 260 Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats. Identities = 136/260 (52%), Positives = 186/260 (71%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+N ++ARI NL W+KE++PDI CLQE K+ D FP +++L YH+ET GQK Sbjct: 1 MKIATWNINGVKARIENLQHWLKESSPDIACLQEIKSVDDQFPRLEIEALGYHVETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVA+LSK P E+ LPGDD D QARFIE ++ + +R+ +LYLP+GNP+ + K Sbjct: 61 GFNGVALLSKKSPDEVNRGLPGDDGDEQARFIEGVYSTDKGVVRVVSLYLPNGNPVDTEK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+SW++R +A RL LEEPL+ AGDYN+IP+P D NP W DA F + RQ+F Sbjct: 121 FPYKLSWMQRLELWAKDRLALEEPLVLAGDYNVIPEPDDAKNPEQWVGDALFKPQSRQAF 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 ++L+N+GFTDAIRA+ D +YSFWDY A +W KN GIRIDH+MLSPEA + S+ ++ Sbjct: 181 RRLENLGFTDAIRASTDDSGIYSFWDYQAGAWQKNNGIRIDHLMLSPEAANRFISSDVEK 240 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 R W KPSDH PV ++L + Sbjct: 241 HVRAWEKPSDHVPVTITLSV 260 >gi|115524629|ref|YP_781540.1| exodeoxyribonuclease III [Rhodopseudomonas palustris BisA53] gi|115518576|gb|ABJ06560.1| Exodeoxyribonuclease III [Rhodopseudomonas palustris BisA53] Length = 263 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 124/260 (47%), Positives = 172/260 (66%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+R R+ +L W+ + +PDI+CLQE K D+ FP E +++L Y++ T GQK Sbjct: 1 MRIATWNVNSVRQRLDHLLTWLNDCSPDIVCLQEIKCVDEAFPREPIEALGYNVVTHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 ++NGVA+LSK+ E L GD+ DV ARF+E ++ +R+ LYLP+GNP+ + K Sbjct: 61 TFNGVALLSKHPLDEATPRLAGDEEDVHARFLEGVVSLKHGVVRVACLYLPNGNPVDTEK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W++R + +RL EEPLI AGD+N+IP P D YN + W +DA F + R+SF Sbjct: 121 YPYKLKWMQRLFDYTKERLRTEEPLILAGDFNVIPAPADVYNALAWVDDALFKPQTRESF 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q L +G TDA+RA+ D Y+FWDY A +W KN GIRIDH++LSP+A L ID Sbjct: 181 QALLGLGLTDALRASTDAAGQYTFWDYQAGAWQKNWGIRIDHLLLSPQAADRLTGVGIDR 240 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 R W KPSDH PV D+ Sbjct: 241 HVRSWEKPSDHVPVWADFDL 260 >gi|163843144|ref|YP_001627548.1| exodeoxyribonuclease III (xth) [Brucella suis ATCC 23445] gi|163673867|gb|ABY37978.1| exodeoxyribonuclease III (xth) [Brucella suis ATCC 23445] Length = 260 Score = 227 bits (578), Expect = 2e-57, Method: Composition-based stats. Identities = 142/260 (54%), Positives = 191/260 (73%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+N ++ARI NL W++E++PDI+CLQE K+ D+ FP +++L YH+ET GQK Sbjct: 1 MKIATWNINGVKARIDNLQHWLRESSPDIVCLQEIKSVDEQFPRLEIEALGYHVETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVA+LSK P EI LPGDD D QARFIE ++ +T +R+ +LYLP+GNPI + K Sbjct: 61 GFNGVALLSKKSPDEINKDLPGDDSDEQARFIEGIYSTDTGVVRVVSLYLPNGNPIDTEK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+SW++R +A +RL LEEPL+ AGDYN+IP+P D NP W DA F + RQ+F Sbjct: 121 FPYKLSWMQRLENWAKKRLTLEEPLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAF 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 ++L+N+GFTDAIRA+ D +YSFWDY A +W KN GIRIDH+MLSPEAT+ SA I+ Sbjct: 181 RRLENLGFTDAIRASTDESGVYSFWDYQAGAWQKNNGIRIDHLMLSPEATNRFISANIEK 240 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 R W KPSDH PV V+L + Sbjct: 241 HVRAWEKPSDHVPVTVTLAV 260 >gi|15965272|ref|NP_385625.1| putative exodeoxyribonuclease III protein [Sinorhizobium meliloti 1021] gi|307309295|ref|ZP_07588963.1| exodeoxyribonuclease III Xth [Sinorhizobium meliloti BL225C] gi|307317036|ref|ZP_07596477.1| exodeoxyribonuclease III Xth [Sinorhizobium meliloti AK83] gi|15074452|emb|CAC46098.1| Putative exodeoxyribonuclease III [Sinorhizobium meliloti 1021] gi|306897124|gb|EFN27869.1| exodeoxyribonuclease III Xth [Sinorhizobium meliloti AK83] gi|306900296|gb|EFN30913.1| exodeoxyribonuclease III Xth [Sinorhizobium meliloti BL225C] Length = 263 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 140/258 (54%), Positives = 183/258 (70%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+N ++AR+ L W++E+NPDI CLQE K+ D+ FP +++L YH+ET GQK Sbjct: 1 MKIATWNINGVKARLDGLVGWLRESNPDIACLQEIKSVDETFPRGEIEALGYHVETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVA+LSK +P EI LPGD D Q+RFIE F++N LR+ LYLP+GNP+ + K Sbjct: 61 GFNGVALLSKVRPDEINRGLPGDPADEQSRFIEGVFSVNGGALRVCCLYLPNGNPVETEK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K++W++R FA QRL LEEPLI AGDYN+IP+ HDC++ +W NDA + E R +F Sbjct: 121 YPYKLAWMRRLAAFAEQRLVLEEPLILAGDYNVIPEAHDCWDVKVWRNDALYLPETRAAF 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 ++L+N+GFTDA+RAT D LYSFWDY A W KN GIRIDH+MLSPEA L S I+ Sbjct: 181 RRLRNLGFTDAVRATSDEAPLYSFWDYQAGCWQKNFGIRIDHLMLSPEAADKLVSTSIEK 240 Query: 244 KPRGWTKPSDHTPVIVSL 261 R W KPSDH PV Sbjct: 241 HVRAWEKPSDHVPVTAEF 258 >gi|197105436|ref|YP_002130813.1| exodeoxyribonuclease III [Phenylobacterium zucineum HLK1] gi|196478856|gb|ACG78384.1| exodeoxyribonuclease III [Phenylobacterium zucineum HLK1] Length = 259 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 119/259 (45%), Positives = 164/259 (63%), Gaps = 1/259 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSI AR+ + W + PD+ CLQE K D+ FP E + L Y++ GQK Sbjct: 1 MRIATWNVNSINARLETVVRWFEAAQPDVACLQEIKCVDEKFPAEPFERLGYNLAIHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVA+LSK ++ LP D D AR+IEA + Q +R+ ++YLP+GNP+ + K Sbjct: 61 TYNGVALLSKRPLEDVTRGLPEGDGDEHARYIEAVVSGP-QPVRVASIYLPNGNPVGTEK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K++W+ R R A L+LEEPL+ AGDYN+IP+P D P WE+DA F + R +F Sbjct: 120 FAYKLAWMGRLHRHAQNLLKLEEPLVLAGDYNVIPEPRDAEFPKNWEDDALFQPQSRAAF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + L+N+G T+A Y+FWDY A +W +N GIRIDH +LSP+A LL I Sbjct: 180 RALKNLGLTEAYLQADGAPGAYTFWDYQAGAWQRNNGIRIDHALLSPQAADLLRGVTIHR 239 Query: 244 KPRGWTKPSDHTPVIVSLD 262 RGW KPSDH P++V LD Sbjct: 240 DVRGWEKPSDHVPLVVELD 258 >gi|83952174|ref|ZP_00960906.1| exodeoxyribonuclease III [Roseovarius nubinhibens ISM] gi|83837180|gb|EAP76477.1| exodeoxyribonuclease III [Roseovarius nubinhibens ISM] Length = 260 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 122/260 (46%), Positives = 165/260 (63%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A++N+N I+ARI L AW+ E PD+ LQE K+ D+NFP E + Y +ET GQK Sbjct: 1 MKIASFNINGIKARIDALPAWLDEAQPDVAILQEIKSVDENFPREIFEERGYQVETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 S+NGVAILSK ++ LPGDD D QAR+IEAT + LR+ LYLP+GNP K Sbjct: 61 SFNGVAILSKLPLEDVTRGLPGDDADEQARYIEATVIGDHSALRLCGLYLPNGNPAPGPK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 YD K++W++R A L LEEP + AGDYNIIPQ D P W DA + R ++ Sbjct: 121 YDYKLAWMERLQARAEALLALEEPFLMAGDYNIIPQDEDAKRPEAWREDALALPQSRAAY 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +++ N+G T+A RA Y+FWDY A +W+++ GIRIDH +LSP+ L +ID Sbjct: 181 RRIVNLGLTEAFRARTQGPGHYTFWDYQAGAWNRDDGIRIDHFLLSPQCADRLTDCQIDK 240 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 RG KPSDH P+ ++LDI Sbjct: 241 HVRGGDKPSDHVPIWITLDI 260 >gi|209549080|ref|YP_002280997.1| exodeoxyribonuclease III Xth [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209534836|gb|ACI54771.1| exodeoxyribonuclease III Xth [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 263 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 138/260 (53%), Positives = 190/260 (73%), Gaps = 1/260 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+N ++ARI NL W+K+++PDI+CLQE KT D+ FP +++L YH+ET GQK Sbjct: 1 MKIATWNINGVKARIDNLTQWLKDSDPDIVCLQEIKTIDEGFPRLEIEALGYHVETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL-RIGNLYLPHGNPITST 122 +NGVAILSK P E+ LPGD LD Q+RF+EA FT+ + R+ +YLP+GNP+ + Sbjct: 61 GFNGVAILSKTSPSEVNRGLPGDPLDEQSRFLEAVFTLPDTRILRVCCIYLPNGNPVDTE 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 KY K++W++R FA++RL EE L+ AGDYN+IP+PHDC++P +WE+DA F + R++ Sbjct: 121 KYPYKLAWMERLRSFAAERLAYEEMLVLAGDYNVIPEPHDCFDPKVWESDALFLPQTREA 180 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F++L+N+G TDA+RAT D YSFWDY A +W KN GIRIDH++LSPEA + SA I+ Sbjct: 181 FRRLENLGLTDAVRATTDATQFYSFWDYQAGAWPKNNGIRIDHLLLSPEAADRMTSAAIE 240 Query: 243 TKPRGWTKPSDHTPVIVSLD 262 R W KPSDH PVI D Sbjct: 241 KHVRAWEKPSDHVPVIAYFD 260 >gi|86357443|ref|YP_469335.1| exodeoxyribonuclease III protein [Rhizobium etli CFN 42] gi|86281545|gb|ABC90608.1| exodeoxyribonuclease III protein [Rhizobium etli CFN 42] Length = 263 Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats. Identities = 140/260 (53%), Positives = 190/260 (73%), Gaps = 1/260 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+N ++ARI NL W+K+++PDI+CLQE KT D+ FP +++L YH+ET GQK Sbjct: 1 MKIATWNINGVKARIDNLTQWLKDSDPDIVCLQEIKTIDEGFPRLEIEALGYHVETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL-RIGNLYLPHGNPITST 122 +NGVAILSK P E+ LPGD LD QARF+EA FT+ + R+ +YLP+GNP+ + Sbjct: 61 GFNGVAILSKTSPFEVNRGLPGDPLDEQARFLEAVFTLPDTRILRVCCIYLPNGNPVDTE 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 KY K++W++R FA++RL EE L+ AGDYN+IP+PHDC++P WE+DA F + R++ Sbjct: 121 KYPYKLAWMERLRSFAAERLAYEEMLVLAGDYNVIPEPHDCFDPRAWESDALFLPQTRRA 180 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F++L+N+G TDA+RAT D LYSFWDY A +W KN GIRIDH++LSPEA + SA I+ Sbjct: 181 FRRLENLGLTDAVRATTDATRLYSFWDYQAGAWPKNNGIRIDHLLLSPEAADRMTSAAIE 240 Query: 243 TKPRGWTKPSDHTPVIVSLD 262 R W KPSDH PVI D Sbjct: 241 KHVRAWEKPSDHVPVIAYFD 260 >gi|17987376|ref|NP_540010.1| exodeoxyribonuclease III [Brucella melitensis bv. 1 str. 16M] gi|17983063|gb|AAL52274.1| exodeoxyribonuclease iii [Brucella melitensis bv. 1 str. 16M] Length = 296 Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats. Identities = 142/260 (54%), Positives = 191/260 (73%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+N ++ARI NL W++E++PDI+CLQE K+ D+ FP +++L YH+ET GQK Sbjct: 37 MKIATWNINGVKARIDNLQHWLRESSPDIVCLQEIKSVDEQFPRLEIEALGYHVETHGQK 96 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVA+LSK P EI LPGDD D QARFIE ++ +T +R+ +LYLP+GNPI + K Sbjct: 97 GFNGVALLSKKSPDEINKGLPGDDSDEQARFIEGIYSTDTGVVRVVSLYLPNGNPIDTEK 156 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+SW++R +A +RL LEEPL+ AGDYN+IP+P D NP W DA F + RQ+F Sbjct: 157 FPYKLSWMQRLENWAKKRLTLEEPLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAF 216 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 ++L+N+GFTDAIRA+ D +YSFWDY A +W KN GIRIDH+MLSPEAT+ SA I+ Sbjct: 217 RRLENLGFTDAIRASTDESGVYSFWDYQAGAWQKNNGIRIDHLMLSPEATNRFISANIEK 276 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 R W KPSDH PV V+L + Sbjct: 277 HVRAWEKPSDHVPVTVTLAV 296 >gi|260459779|ref|ZP_05808033.1| exodeoxyribonuclease III Xth [Mesorhizobium opportunistum WSM2075] gi|259034581|gb|EEW35838.1| exodeoxyribonuclease III Xth [Mesorhizobium opportunistum WSM2075] Length = 264 Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats. Identities = 134/261 (51%), Positives = 178/261 (68%), Gaps = 1/261 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + TWN+N +RARI NL W+ E+ PDI+CLQE KT D FP +++L Y++ET GQK Sbjct: 1 MKIVTWNINGVRARIGNLTHWLTESAPDIVCLQEIKTVDDQFPRAEIEALGYNVETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122 +NGVA+LSK + E+ LPGDD D QARFIE F+ + LR+ +LYLP+GNPI Sbjct: 61 GFNGVALLSKLRFDEVTKGLPGDDADEQARFIEGVFSTDKGALRVASLYLPNGNPIDDEK 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K+ K+SW+ R R+A +RL LEE L+ AGDYN+IP+P D P W DA F + RQ+ Sbjct: 121 KFPYKLSWMARLERWAEERLRLEEALVLAGDYNVIPEPIDARFPENWLGDALFQPQTRQA 180 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F++L N+GFT+A+RA D Y+FWDY A +W KN GIRIDH++LSPEA + SA I+ Sbjct: 181 FRRLLNLGFTEAVRAVTDAPDTYTFWDYQAGAWQKNNGIRIDHLLLSPEAANRFSSASIE 240 Query: 243 TKPRGWTKPSDHTPVIVSLDI 263 R W KPSDH PV + L + Sbjct: 241 KHVRAWEKPSDHVPVAIDLAL 261 >gi|148559237|ref|YP_001258847.1| exodeoxyribonuclease III [Brucella ovis ATCC 25840] gi|148370494|gb|ABQ60473.1| exodeoxyribonuclease III [Brucella ovis ATCC 25840] Length = 279 Score = 226 bits (576), Expect = 3e-57, Method: Composition-based stats. Identities = 142/260 (54%), Positives = 191/260 (73%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+N ++ARI NL W++E++PDI+CLQE K+ D+ FP +++L YH+ET GQK Sbjct: 20 MKIATWNINGVKARIDNLQHWLRESSPDIVCLQEIKSVDEQFPRLEIEALGYHVETHGQK 79 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVA+LSK P EI LPGDD D QARFIE ++ +T +R+ +LYLP+GNPI + K Sbjct: 80 GFNGVALLSKKSPDEINKGLPGDDSDEQARFIEGIYSTDTGVVRVVSLYLPNGNPIDTEK 139 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+SW++R +A +RL LEEPL+ AGDYN+IP+P D NP W DA F + RQ+F Sbjct: 140 FPYKLSWMQRLENWAKKRLTLEEPLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAF 199 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 ++L+N+GFTDAIRA+ D +YSFWDY A +W KN GIRIDH+MLSPEAT+ SA I+ Sbjct: 200 RRLENLGFTDAIRASTDESGVYSFWDYQAGAWQKNNGIRIDHLMLSPEATNRFTSANIEK 259 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 R W KPSDH PV V+L + Sbjct: 260 HVRAWEKPSDHVPVTVTLAV 279 >gi|218673944|ref|ZP_03523613.1| exodeoxyribonuclease III Xth [Rhizobium etli GR56] Length = 263 Score = 226 bits (575), Expect = 3e-57, Method: Composition-based stats. Identities = 138/260 (53%), Positives = 191/260 (73%), Gaps = 1/260 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+N ++ARI NL W+K+++PDI+CLQE KT D+ FP +++L YH+ET GQK Sbjct: 1 MKIATWNINGVKARIDNLTQWLKDSDPDIVCLQEIKTIDEGFPRLEIEALGYHVETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL-RIGNLYLPHGNPITST 122 +NGVAILSK P E+ LPGD LD Q+RF+EA FT+ + R+ +YLP+GNP+ + Sbjct: 61 GFNGVAILSKTSPSEVNRGLPGDALDEQSRFLEAVFTLPDTRILRVCCIYLPNGNPVDTE 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 KY K++W++R FA++RL EE L+ AGDYN+IP+PHDC++P +WE+DA F + R++ Sbjct: 121 KYPYKLAWMERLRMFAAERLAYEEILVLAGDYNVIPEPHDCFDPKVWESDALFLPQTREA 180 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F++L+N+G TDA+RAT D LYSFWDY A +W KN GIRIDH++LSPEA + SA I+ Sbjct: 181 FRRLENLGLTDAVRATTDATRLYSFWDYQAGAWPKNNGIRIDHLLLSPEAADRMTSAAIE 240 Query: 243 TKPRGWTKPSDHTPVIVSLD 262 R W KPSDH PV+ D Sbjct: 241 KHVRAWEKPSDHVPVVAYFD 260 >gi|13471192|ref|NP_102761.1| exodeoxyribonuclease III [Mesorhizobium loti MAFF303099] gi|14021936|dbj|BAB48547.1| exodeoxyribonuclease III [Mesorhizobium loti MAFF303099] Length = 264 Score = 226 bits (575), Expect = 3e-57, Method: Composition-based stats. Identities = 133/261 (50%), Positives = 181/261 (69%), Gaps = 1/261 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + TWN+N +RARI NL W+ E+ PDI+CLQE KT D+ FP +++L Y++ET GQK Sbjct: 1 MKIVTWNINGVRARIGNLTHWLTESAPDIVCLQEIKTVDEQFPRAEIEALGYNVETNGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122 +NGVA+LSK + E++ LPGDD D QARFIE F+ + LR+ +LYLP+GNPI Sbjct: 61 GFNGVALLSKLRFDEVIRGLPGDDTDEQARFIEGVFSTDKGALRVASLYLPNGNPIDDEK 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K+ K++W+ R R+A +RL+LEE L+ AGDYN+IP+P D P W DA F + RQ+ Sbjct: 121 KFPYKLNWMARLERWAEERLKLEEALVLAGDYNVIPEPIDARFPENWLGDALFQPQTRQA 180 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F++L N+GFT+A+RA D Y+FWDY A +W KN GIRIDH++LSPEA + SA I+ Sbjct: 181 FRRLLNLGFTEAVRAVTDAPDTYTFWDYQAGAWQKNNGIRIDHLLLSPEAANRFSSASIE 240 Query: 243 TKPRGWTKPSDHTPVIVSLDI 263 R W KPSDH PV + L + Sbjct: 241 KHVRAWEKPSDHVPVAIDLAL 261 >gi|237815303|ref|ZP_04594301.1| exodeoxyribonuclease III (xth) [Brucella abortus str. 2308 A] gi|237790140|gb|EEP64350.1| exodeoxyribonuclease III (xth) [Brucella abortus str. 2308 A] Length = 284 Score = 226 bits (575), Expect = 4e-57, Method: Composition-based stats. Identities = 143/260 (55%), Positives = 192/260 (73%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+NS++ARI NL W++E++PDI+CLQE K+ D+ FP +++L YH+ET GQK Sbjct: 25 MKIATWNINSVKARIDNLQHWLRESSPDIVCLQEIKSVDEQFPRLEIEALGYHVETHGQK 84 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVA+LSK P EI LPGDD D QARFIE ++ +T +R+ +LYLP+GNPI + K Sbjct: 85 GFNGVALLSKKSPDEINKGLPGDDSDEQARFIEGIYSTDTGVVRVVSLYLPNGNPIDTEK 144 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+SW++R +A +RL LEEPL+ AGDYN+IP+P D NP W DA F + RQ+F Sbjct: 145 FPYKLSWMQRLENWAKKRLTLEEPLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAF 204 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 ++L+N+GFTDAIRA+ D +YSFWDY A +W KN GIRIDH+MLSPEAT+ SA I+ Sbjct: 205 RRLENLGFTDAIRASTDESGVYSFWDYQAGAWQKNNGIRIDHLMLSPEATNRFISANIEK 264 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 R W KPSDH PV V+L + Sbjct: 265 HVRAWEKPSDHVPVTVTLAV 284 >gi|144899913|emb|CAM76777.1| Endonuclease/exonuclease/phosphatase [Magnetospirillum gryphiswaldense MSR-1] Length = 256 Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats. Identities = 113/260 (43%), Positives = 160/260 (61%), Gaps = 4/260 (1%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 +V +ATWN+NS++AR+ N+ W++ PD++ LQE K +D FP QS + + GQ Sbjct: 1 MVRIATWNINSVKARLPNVMDWLQSAKPDVLLLQEIKCQDDGFPTLDFQSAGWQVAVHGQ 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 KSYNGVAILS++ + LPGD+ D QAR+I+A LRI +LYLP+GNP Sbjct: 61 KSYNGVAILSRHTLDNVQIRLPGDEADEQARYIQADIQG----LRIASLYLPNGNPCPGE 116 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K+D K+ W++R + + L+ P + GDYNI P D Y+P W +DA E R Sbjct: 117 KFDYKLRWMRRLVDHSKTLLDQGMPFVLGGDYNICPTDADVYDPAGWADDALCRPESRAL 176 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F++L ++G T+A RA H LY+FWDY A +W + G+RIDH +LSP A L + ID Sbjct: 177 FRELCHLGLTEAFRALHPQPGLYTFWDYQAGAWPRGNGLRIDHFLLSPAAADRLIACDID 236 Query: 243 TKPRGWTKPSDHTPVIVSLD 262 +PRG K SDHTP+ + L+ Sbjct: 237 KEPRGREKASDHTPIWIDLN 256 >gi|189024059|ref|YP_001934827.1| Exodeoxyribonuclease III [Brucella abortus S19] gi|297248222|ref|ZP_06931940.1| exodeoxyribonuclease III [Brucella abortus bv. 5 str. B3196] gi|189019631|gb|ACD72353.1| Exodeoxyribonuclease III [Brucella abortus S19] gi|297175391|gb|EFH34738.1| exodeoxyribonuclease III [Brucella abortus bv. 5 str. B3196] Length = 296 Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats. Identities = 143/260 (55%), Positives = 192/260 (73%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+NS++ARI NL W++E++PDI+CLQE K+ D+ FP +++L YH+ET GQK Sbjct: 37 MKIATWNINSVKARIDNLQHWLRESSPDIVCLQEIKSVDEQFPRLEIEALGYHVETHGQK 96 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVA+LSK P EI LPGDD D QARFIE ++ +T +R+ +LYLP+GNPI + K Sbjct: 97 GFNGVALLSKKSPDEINKGLPGDDSDEQARFIEGIYSTDTGVVRVVSLYLPNGNPIDTEK 156 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+SW++R +A +RL LEEPL+ AGDYN+IP+P D NP W DA F + RQ+F Sbjct: 157 FPYKLSWMQRLENWAKKRLTLEEPLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAF 216 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 ++L+N+GFTDAIRA+ D +YSFWDY A +W KN GIRIDH+MLSPEAT+ SA I+ Sbjct: 217 RRLENLGFTDAIRASTDESGVYSFWDYQAGAWQKNNGIRIDHLMLSPEATNRFISANIEK 276 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 R W KPSDH PV V+L + Sbjct: 277 HVRAWEKPSDHVPVTVTLAV 296 >gi|254420197|ref|ZP_05033921.1| exodeoxyribonuclease III [Brevundimonas sp. BAL3] gi|196186374|gb|EDX81350.1| exodeoxyribonuclease III [Brevundimonas sp. BAL3] Length = 265 Score = 225 bits (574), Expect = 5e-57, Method: Composition-based stats. Identities = 120/265 (45%), Positives = 166/265 (62%), Gaps = 1/265 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ AR+ + AW+++ PD+ C QE K D+ FP E +SL Y++ET GQK Sbjct: 1 MRIATWNVNSVNARLPTVLAWLEQAAPDVACFQEIKCVDEKFPREAFESLGYNVETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 SYNGVA+LSKY +I LPGD+ D QAR++EA + LR+ ++YLP+GNPI + K Sbjct: 61 SYNGVALLSKYPLSDIRRGLPGDETDEQARYLEAVIEAP-RPLRVASIYLPNGNPIGTEK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 +D K++W +R R A L EEPL GDYN+IP+ D NP W +DA F + RQ+F Sbjct: 120 FDYKLAWFERLNRHARDLLAFEEPLALCGDYNVIPEAEDAKNPAAWTDDALFQPQSRQAF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + L+N+G D+ + YSFWDY A +W +N GIRID +LSP+A L Sbjct: 180 RALKNLGLADSHEVGGEPAGTYSFWDYQAGAWQRNHGIRIDFALLSPQAADRLRGVETHR 239 Query: 244 KPRGWTKPSDHTPVIVSLDIPEPRK 268 R KPSDH PV+V +D+ + Sbjct: 240 DARDMDKPSDHVPVVVDIDLSAGTE 264 >gi|319783180|ref|YP_004142656.1| exodeoxyribonuclease III Xth [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317169068|gb|ADV12606.1| exodeoxyribonuclease III Xth [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 264 Score = 225 bits (574), Expect = 5e-57, Method: Composition-based stats. Identities = 134/261 (51%), Positives = 180/261 (68%), Gaps = 1/261 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + TWN+N +RARI NL W+ E+ PDI+CLQE KT D+ FP +++L Y++ET GQK Sbjct: 1 MKIVTWNINGVRARIGNLTHWLTESAPDIVCLQEIKTVDEQFPRAEIEALGYNVETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122 +NGVA+LSK + E++ LPGDD D QARFIE F+ + LR+ +LYLP+GNPI Sbjct: 61 GFNGVALLSKLRFDEVIRGLPGDDADEQARFIEGVFSTDKGALRVASLYLPNGNPIDDEK 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K+ K+SW+ R R+A +RL LEE L+ AGDYN+IP+P D P W DA F + RQ+ Sbjct: 121 KFPYKLSWMARLERWAEERLRLEEALVLAGDYNVIPEPIDARFPENWLGDALFQPQTRQA 180 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F++L N+GFT+A+RA D Y+FWDY A +W KN GIRIDH++LSPEA + SA I+ Sbjct: 181 FRRLLNLGFTEAVRAVTDARDTYTFWDYQAGAWQKNNGIRIDHLLLSPEAANRFSSASIE 240 Query: 243 TKPRGWTKPSDHTPVIVSLDI 263 R W KPSDH PV + L + Sbjct: 241 KHVRAWEKPSDHVPVAIDLAL 261 >gi|239831752|ref|ZP_04680081.1| exodeoxyribonuclease III (xth) [Ochrobactrum intermedium LMG 3301] gi|239824019|gb|EEQ95587.1| exodeoxyribonuclease III (xth) [Ochrobactrum intermedium LMG 3301] Length = 272 Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats. Identities = 138/260 (53%), Positives = 186/260 (71%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+N ++ARI NL W+KE++PDI+CLQE K+ D FP +++L YH+ET GQK Sbjct: 13 MKIATWNINGVKARIDNLLHWLKESSPDIVCLQEIKSVDDQFPRLEIEALGYHVETHGQK 72 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVA+LSK P EI LPGDD D QARFIE ++ + +R+ +LYLP+GNP+ + K Sbjct: 73 GFNGVALLSKKSPDEINRGLPGDDSDEQARFIEGVYSTDKGVVRVVSLYLPNGNPVDTEK 132 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+SW++R +A RL LEEPL+ AGDYN+IP+P D NP W DA F + RQ+F Sbjct: 133 FPYKLSWMQRLELWARDRLALEEPLVLAGDYNVIPEPEDARNPGQWVGDALFQPQSRQAF 192 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 ++L+NMGFTDAIRA+ D +YSFWDY A +W KN GIRIDH+MLSPEA + S+ ++ Sbjct: 193 RRLENMGFTDAIRASTDEAGIYSFWDYQAGAWQKNNGIRIDHLMLSPEAANRFISSDVEK 252 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 R W KPSDH PV + L + Sbjct: 253 HVRAWEKPSDHVPVTIRLAV 272 >gi|90419377|ref|ZP_01227287.1| exodeoxyribonuclease III [Aurantimonas manganoxydans SI85-9A1] gi|90336314|gb|EAS50055.1| exodeoxyribonuclease III [Aurantimonas manganoxydans SI85-9A1] Length = 260 Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats. Identities = 131/258 (50%), Positives = 176/258 (68%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+N ++AR+ L AW++E +PDI CLQE K D+ FP E +++L YH+ET GQK Sbjct: 1 MLIATWNINGVKARLDALLAWLQERSPDIACLQEIKNVDETFPREAIEALGYHVETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVA+LSK +P+ I LPGD D ARFIE + + + LR+ +LYLP+GNP+ + K Sbjct: 61 GFNGVALLSKEKPVSIEPRLPGDSSDEHARFIEGVWDFHGRPLRVASLYLPNGNPLGTEK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K++W++R L A + EE L+ AGDYNIIP+ D P W DA F E R ++ Sbjct: 121 FTYKLAWMQRLLAHARDSMAREELLVLAGDYNIIPERGDAARPDKWTGDALFQPESRAAY 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 ++L N+G +DAIRAT D YSFWDY A +W KN GIRIDH++LSPEA + SA ID Sbjct: 181 RRLINLGLSDAIRATTDADGTYSFWDYQAGAWQKNNGIRIDHLLLSPEAQDRMASAGIDR 240 Query: 244 KPRGWTKPSDHTPVIVSL 261 RGW KPSDH PV+V L Sbjct: 241 HVRGWEKPSDHVPVLVEL 258 >gi|260566570|ref|ZP_05837040.1| exodeoxyribonuclease III [Brucella suis bv. 4 str. 40] gi|261758076|ref|ZP_06001785.1| exodeoxyribonuclease III [Brucella sp. F5/99] gi|260156088|gb|EEW91168.1| exodeoxyribonuclease III [Brucella suis bv. 4 str. 40] gi|261738060|gb|EEY26056.1| exodeoxyribonuclease III [Brucella sp. F5/99] Length = 279 Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats. Identities = 142/260 (54%), Positives = 191/260 (73%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+N ++ARI NL W++E++PDI+CLQE K+ D+ FP +++L YH+ET GQK Sbjct: 20 MKIATWNINGVKARIDNLQHWLRESSPDIVCLQEIKSVDEQFPRLEIEALGYHVETHGQK 79 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVA+LSK P EI LPGDD D QARFIE ++ +T +R+ +LYLP+GNPI + K Sbjct: 80 GFNGVALLSKKSPDEINKGLPGDDSDEQARFIEGIYSTDTGVVRVVSLYLPNGNPIDTEK 139 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+SW++R +A +RL LEEPL+ AGDYN+IP+P D NP W DA F + RQ+F Sbjct: 140 FPYKLSWMQRLENWAKKRLTLEEPLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAF 199 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 ++L+N+GFTDAIRA+ D +YSFWDY A +W KN GIRIDH+MLSPEAT+ SA I+ Sbjct: 200 RRLENLGFTDAIRASTDESGVYSFWDYQAGAWQKNNGIRIDHLMLSPEATNRFISANIEK 259 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 R W KPSDH PV V+L + Sbjct: 260 HVRAWEKPSDHVPVTVTLAV 279 >gi|163739595|ref|ZP_02147004.1| exodeoxyribonuclease III [Phaeobacter gallaeciensis BS107] gi|161387054|gb|EDQ11414.1| exodeoxyribonuclease III [Phaeobacter gallaeciensis BS107] Length = 268 Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats. Identities = 128/269 (47%), Positives = 170/269 (63%), Gaps = 10/269 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+N+N I+ARI+ L W+ E PD++ LQE K+ D+ FP E + Y++ET GQK Sbjct: 1 MKIATFNINGIKARINALPEWLDEAQPDVVVLQEIKSVDEAFPRELFEDRGYNVETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122 S+NGVAILSK ++ LPGDD D QAR+IEAT + Q +RI LYLP+GNP+ Sbjct: 61 SFNGVAILSKLPLEDVRRGLPGDDSDEQARWIEAT-VVGKQAIRICGLYLPNGNPVELDA 119 Query: 123 --------KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 KY K++W++R + A L E P + AGDYNIIPQ D P W++DA Sbjct: 120 EGQPVEGGKYAYKLAWMERLRQRAKDLLAEEMPALMAGDYNIIPQAEDAKTPEAWKDDAL 179 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R +FQ++ +GFT+A RA H YSFWDY A +W++N GIRIDH +LSP+A Sbjct: 180 HRPESRAAFQRIMALGFTEAFRARHQGPGHYSFWDYQAGAWNRNNGIRIDHFLLSPQAAD 239 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 LL +ID RG KPSDH PV V LD+ Sbjct: 240 LLRDCQIDKDVRGRDKPSDHVPVWVDLDL 268 >gi|260563899|ref|ZP_05834385.1| exodeoxyribonuclease III [Brucella melitensis bv. 1 str. 16M] gi|260153915|gb|EEW89007.1| exodeoxyribonuclease III [Brucella melitensis bv. 1 str. 16M] Length = 279 Score = 225 bits (573), Expect = 6e-57, Method: Composition-based stats. Identities = 142/260 (54%), Positives = 191/260 (73%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+N ++ARI NL W++E++PDI+CLQE K+ D+ FP +++L YH+ET GQK Sbjct: 20 MKIATWNINGVKARIDNLQHWLRESSPDIVCLQEIKSVDEQFPRLEIEALGYHVETHGQK 79 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVA+LSK P EI LPGDD D QARFIE ++ +T +R+ +LYLP+GNPI + K Sbjct: 80 GFNGVALLSKKSPDEINKGLPGDDSDEQARFIEGIYSTDTGVVRVVSLYLPNGNPIDTEK 139 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+SW++R +A +RL LEEPL+ AGDYN+IP+P D NP W DA F + RQ+F Sbjct: 140 FPYKLSWMQRLENWAKKRLTLEEPLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAF 199 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 ++L+N+GFTDAIRA+ D +YSFWDY A +W KN GIRIDH+MLSPEAT+ SA I+ Sbjct: 200 RRLENLGFTDAIRASTDESGVYSFWDYQAGAWQKNNGIRIDHLMLSPEATNRFISANIEK 259 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 R W KPSDH PV V+L + Sbjct: 260 HVRAWEKPSDHVPVTVTLAV 279 >gi|254487256|ref|ZP_05100461.1| exodeoxyribonuclease III [Roseobacter sp. GAI101] gi|214044125|gb|EEB84763.1| exodeoxyribonuclease III [Roseobacter sp. GAI101] Length = 260 Score = 225 bits (572), Expect = 7e-57, Method: Composition-based stats. Identities = 122/259 (47%), Positives = 158/259 (61%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+N+N I+ARI L W+ E PD+ LQE KT D FP E + Y++ET GQK Sbjct: 1 MKIATFNINGIKARIDALPQWLDEAQPDVAILQEIKTVDDAFPRELFEDRGYNVETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 S+NGVAILSK ++ LPGDD D QAR+IEAT + +R+ LYLP+GNP K Sbjct: 61 SFNGVAILSKRPLEDVTRGLPGDDGDEQARYIEATVMGDKSAIRLCGLYLPNGNPAPGPK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 +D K+ W+ R A L E P + GDYN+IPQ D P W +DA F E R ++ Sbjct: 121 FDYKLEWMARLEDRARALLAEETPFLMTGDYNVIPQAEDAATPDAWRDDALFRPETRAAW 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +KL +G T+A RA YSFWDY A +W++N GIRIDH +LSP +L +ID Sbjct: 181 RKLVALGLTEAFRARTQGPGHYSFWDYQAGAWNRNNGIRIDHFLLSPVVADMLRDCQIDK 240 Query: 244 KPRGWTKPSDHTPVIVSLD 262 + RG KPSDH PV V LD Sbjct: 241 EIRGRDKPSDHVPVWVDLD 259 >gi|149202739|ref|ZP_01879711.1| exodeoxyribonuclease III [Roseovarius sp. TM1035] gi|149144021|gb|EDM32055.1| exodeoxyribonuclease III [Roseovarius sp. TM1035] Length = 260 Score = 224 bits (571), Expect = 9e-57, Method: Composition-based stats. Identities = 124/259 (47%), Positives = 163/259 (62%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+N+N I+ARI L AW+ E +PD+ LQE K+ D FP E + Y++ET GQK Sbjct: 1 MKIATFNINGIKARIDALPAWLDEASPDVALLQEIKSVDDGFPRELFEERGYNVETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVAILSK ++ LPGDD D QAR+IEAT + + LR+ LYLP+GNP K Sbjct: 61 GFNGVAILSKRPLEDVTRGLPGDDTDEQARWIEATVVGDHRALRLCGLYLPNGNPAPGPK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 YD K++W+ R A L EEP++ GDYNIIPQ D P W DA E R +F Sbjct: 121 YDYKLAWMDRLHARARDLLASEEPVLMGGDYNIIPQDEDAARPDAWREDALARPESRAAF 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +++ N+GFT+A RA Y+FWDY A +W+KN GIRIDH +LSP+A L+ ID Sbjct: 181 RRILNLGFTEAFRAQVQGPGHYTFWDYQAGAWNKNDGIRIDHFLLSPQAADLMTDCGIDK 240 Query: 244 KPRGWTKPSDHTPVIVSLD 262 RG KPSDH P+ V L+ Sbjct: 241 DIRGRDKPSDHVPLWVELN 259 >gi|110680357|ref|YP_683364.1| exodeoxyribonuclease III, putative [Roseobacter denitrificans OCh 114] gi|109456473|gb|ABG32678.1| exodeoxyribonuclease III, putative [Roseobacter denitrificans OCh 114] Length = 260 Score = 224 bits (571), Expect = 9e-57, Method: Composition-based stats. Identities = 126/258 (48%), Positives = 165/258 (63%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+N+N I+ARI L AW+KE PD+ LQE K+ D+ FP + + Y++ET GQK Sbjct: 1 MKIATFNINGIKARIDALPAWLKEAQPDVALLQEIKSVDEAFPRTVFEDMGYNLETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 S+NGVAILSK ++ LPGD+ D QAR+IEAT +T +R+ LYLP+GNP K Sbjct: 61 SFNGVAILSKLPLEDVTRGLPGDETDEQARYIEATVMGDTAPVRVCGLYLPNGNPAPGPK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 YD K+ W+ R A L E + AGDYNIIPQ D P W DA F LE R +F Sbjct: 121 YDYKLDWMARLYDRAKALLADETTFVMAGDYNIIPQAEDAAKPESWREDALFRLESRTAF 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 ++L N+G T+A RA YSFWDY A +W++N GIRIDH++LSP+A +L +ID Sbjct: 181 RRLLNLGLTEAFRARTQGPGHYSFWDYQAGAWNRNNGIRIDHLLLSPQAADMLVDCQIDK 240 Query: 244 KPRGWTKPSDHTPVIVSL 261 + RG KPSDH PV V L Sbjct: 241 EVRGRDKPSDHVPVWVDL 258 >gi|163741419|ref|ZP_02148810.1| exodeoxyribonuclease III [Phaeobacter gallaeciensis 2.10] gi|161385153|gb|EDQ09531.1| exodeoxyribonuclease III [Phaeobacter gallaeciensis 2.10] Length = 268 Score = 224 bits (571), Expect = 9e-57, Method: Composition-based stats. Identities = 128/269 (47%), Positives = 170/269 (63%), Gaps = 10/269 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+N+N I+ARI+ L W+ E PD++ LQE K+ D+ FP E + Y++ET GQK Sbjct: 1 MKIATFNINGIKARINALPEWLDEAQPDVVVLQEIKSVDEAFPRELFEDRGYNVETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122 S+NGVAILSK ++ LPGDD D QAR+IEAT + Q +RI LYLP+GNP+ Sbjct: 61 SFNGVAILSKLPLEDVRRGLPGDDSDEQARWIEAT-VVGKQAIRICGLYLPNGNPVELDA 119 Query: 123 --------KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 KY K++W++R + A L E P + AGDYNIIPQ D P W++DA Sbjct: 120 EGRPVEGGKYAYKLAWMERLRQRAKDLLAEEMPALMAGDYNIIPQAEDAKTPDAWKDDAL 179 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R +FQ++ +GFT+A RA H YSFWDY A +W++N GIRIDH +LSP+A Sbjct: 180 HRPESRAAFQRIVALGFTEAFRARHQGPGHYSFWDYQAGAWNRNNGIRIDHFLLSPQAAD 239 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 LL +ID RG KPSDH PV V LD+ Sbjct: 240 LLRDCQIDKDVRGRDKPSDHVPVWVDLDL 268 >gi|154248160|ref|YP_001419118.1| exodeoxyribonuclease III Xth [Xanthobacter autotrophicus Py2] gi|154162245|gb|ABS69461.1| exodeoxyribonuclease III Xth [Xanthobacter autotrophicus Py2] Length = 262 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 122/260 (46%), Positives = 170/260 (65%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSIR R+ + W+ E PDI+C+QE K + + FP E + L Y++ GQK Sbjct: 1 MRIATWNVNSIRQRLDHAVRWLGETRPDIVCIQEIKCQTEAFPKEAFEQLGYNVTVHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVA+LS+ ++ L GDD DVQARFIEA ++ +R+ LYLP+GNP+ + K Sbjct: 61 GFNGVALLSRLPLEDVTHGLAGDDGDVQARFIEAVVSVKGGVVRVACLYLPNGNPVDTEK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ +++R FA+ RL+LEEPLI AGD+N+IP+ D +P W DA F R +F Sbjct: 121 YPYKLGFMERLEAFAADRLKLEEPLILAGDFNVIPEARDAADPSAWVGDALFLPRTRSAF 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + L ++G TDA+RAT D LY+FWDY A +W ++ GIRIDH++LSP+A L + ID Sbjct: 181 RSLTHLGLTDALRATSDAGRLYTFWDYQAGAWQRDMGIRIDHLLLSPQAADKLIATGIDK 240 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 R W KPSDH P+ L I Sbjct: 241 HVRAWEKPSDHVPIWADLAI 260 >gi|260545435|ref|ZP_05821176.1| exodeoxyribonuclease III [Brucella abortus NCTC 8038] gi|260096842|gb|EEW80717.1| exodeoxyribonuclease III [Brucella abortus NCTC 8038] Length = 279 Score = 224 bits (571), Expect = 1e-56, Method: Composition-based stats. Identities = 143/260 (55%), Positives = 192/260 (73%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+NS++ARI NL W++E++PDI+CLQE K+ D+ FP +++L YH+ET GQK Sbjct: 20 MKIATWNINSVKARIDNLQHWLRESSPDIVCLQEIKSVDEQFPRLEIEALGYHVETHGQK 79 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVA+LSK P EI LPGDD D QARFIE ++ +T +R+ +LYLP+GNPI + K Sbjct: 80 GFNGVALLSKKSPDEINKGLPGDDSDEQARFIEGIYSTDTGVVRVVSLYLPNGNPIDTEK 139 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+SW++R +A +RL LEEPL+ AGDYN+IP+P D NP W DA F + RQ+F Sbjct: 140 FPYKLSWMQRLENWAKKRLTLEEPLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAF 199 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 ++L+N+GFTDAIRA+ D +YSFWDY A +W KN GIRIDH+MLSPEAT+ SA I+ Sbjct: 200 RRLENLGFTDAIRASTDESGVYSFWDYQAGAWQKNNGIRIDHLMLSPEATNRFISANIEK 259 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 R W KPSDH PV V+L + Sbjct: 260 HVRAWEKPSDHVPVTVTLAV 279 >gi|260574689|ref|ZP_05842692.1| exodeoxyribonuclease III Xth [Rhodobacter sp. SW2] gi|259023106|gb|EEW26399.1| exodeoxyribonuclease III Xth [Rhodobacter sp. SW2] Length = 263 Score = 224 bits (570), Expect = 1e-56, Method: Composition-based stats. Identities = 120/259 (46%), Positives = 161/259 (62%), Gaps = 1/259 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A++N+N I+ARI L AW+ + PD++ LQE K+ D+ FP + L Y +ET GQK Sbjct: 5 MKIASFNINGIKARIEALPAWLADAAPDVVVLQEIKSVDEGFPRGLFEDLGYRVETHGQK 64 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVAILSK ++ LPGD D QAR+IEAT I + +R+ LY P+GNP K Sbjct: 65 GFNGVAILSKLPLEDVTRGLPGDPTDEQARWIEAT-VIGARAVRVAGLYAPNGNPAPGPK 123 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 YD K+ W+ R A L EEP++ AGDYN+IPQ D P W DA + + R + Sbjct: 124 YDYKLGWMARMRERALGLLATEEPVVLAGDYNVIPQAMDAAKPEAWLEDALYLPQSRAAL 183 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q++ N+G+ DA R H YSFWDY A +W +N GIRIDH++LSP+A+ LL A ID Sbjct: 184 QRIVNLGYADAFRLRHPGPGHYSFWDYQAGAWERNNGIRIDHLLLSPQASDLLRDAGIDK 243 Query: 244 KPRGWTKPSDHTPVIVSLD 262 R KPSDH PV + LD Sbjct: 244 AVRAGDKPSDHVPVWIDLD 262 >gi|218463283|ref|ZP_03503374.1| exodeoxyribonuclease III protein [Rhizobium etli Kim 5] Length = 263 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 139/260 (53%), Positives = 190/260 (73%), Gaps = 1/260 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT N+N ++ARI NL W+K+++PDI+CLQE KT D+ FP +++L YH+ET GQK Sbjct: 1 MKIATCNINGVKARIDNLTQWLKDSDPDIVCLQEIKTIDEGFPRLEIEALGYHVETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL-RIGNLYLPHGNPITST 122 +NGVAILSK P E+ LPGD LD Q+RF+EA FT+ + R+ +YLP+GNP+ + Sbjct: 61 GFNGVAILSKTSPSEVNRGLPGDALDEQSRFLEAVFTLPNTRILRVCCIYLPNGNPVETE 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 KY K++W++R FA++RL EE L+ AGDYN+IP+PHDC++P +WENDA F + R++ Sbjct: 121 KYPYKLAWMERLRSFAAERLAYEEMLVLAGDYNVIPEPHDCFDPKVWENDALFLPQTREA 180 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F++L+N+G TDA+RAT D LYSFWDY A +W KN GIRIDH++LSPEA + SA I+ Sbjct: 181 FRRLENLGLTDAVRATTDATRLYSFWDYQAGAWPKNNGIRIDHLLLSPEAADRMTSAAIE 240 Query: 243 TKPRGWTKPSDHTPVIVSLD 262 R W KPSDH PVI D Sbjct: 241 KHVRAWEKPSDHVPVIAYFD 260 >gi|221639069|ref|YP_002525331.1| Exodeoxyribonuclease III [Rhodobacter sphaeroides KD131] gi|221159850|gb|ACM00830.1| Exodeoxyribonuclease III [Rhodobacter sphaeroides KD131] Length = 268 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 121/258 (46%), Positives = 169/258 (65%), Gaps = 1/258 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+N+N ++AR+ L AW++ PD++ LQE K+ D+ FP + +H+ET GQK Sbjct: 10 MKIATFNINGVKARLEALLAWLEAAEPDVVLLQEIKSVDEGFPRAAFEEKGWHLETHGQK 69 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVAILS+ ++V LPGD DVQAR+IEAT + + +R+ LYLP+GNP K Sbjct: 70 GFNGVAILSRLPLEDVVRGLPGDPEDVQARWIEAT-VVGERAVRVCGLYLPNGNPAPGPK 128 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 YD K+ W++R A++ L EEP++ AGDYN+IPQ D P +W DA F E R +F Sbjct: 129 YDYKLGWMERMKTRAAELLATEEPVVLAGDYNVIPQAEDAARPEVWVTDALFLPESRAAF 188 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +++ N+G+T+A RA YSFWDY A +W KN GIRIDH++LSP+A L+ RID Sbjct: 189 RRILNLGYTEAFRARTFGPGHYSFWDYQAGAWEKNNGIRIDHLLLSPQAADLMTDVRIDR 248 Query: 244 KPRGWTKPSDHTPVIVSL 261 + R KPSDH PV V L Sbjct: 249 EVRSGEKPSDHVPVWVEL 266 >gi|163735846|ref|ZP_02143275.1| exodeoxyribonuclease III, putative [Roseobacter litoralis Och 149] gi|161390932|gb|EDQ15272.1| exodeoxyribonuclease III, putative [Roseobacter litoralis Och 149] Length = 260 Score = 223 bits (569), Expect = 2e-56, Method: Composition-based stats. Identities = 125/258 (48%), Positives = 165/258 (63%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+N+N I+ARI L AW+KE PD+ LQE K+ D+ FP + + Y++ET GQK Sbjct: 1 MKIATFNINGIKARIDALPAWLKEAQPDVALLQEIKSVDEAFPRSVFEDMGYNLETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 S+NGVAILSK ++ LPGD+ D QAR+IEAT +T +R+ LYLP+GNP K Sbjct: 61 SFNGVAILSKLPLEDVTRGLPGDESDEQARYIEATVMGDTAPVRVCGLYLPNGNPAPGPK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 YD K+ W+ R + L E + AGDYNIIPQ D P W +DA F LE R +F Sbjct: 121 YDYKLDWMARLYDRVKELLADETTFVMAGDYNIIPQAEDAAKPESWRDDALFRLESRTAF 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +KL N+G T+A RA YSFWDY A +W++N GIRIDH++LSP+A +L +ID Sbjct: 181 RKLINLGLTEAFRARTAGPGHYSFWDYQAGAWNRNNGIRIDHLLLSPQAADMLVDCQIDK 240 Query: 244 KPRGWTKPSDHTPVIVSL 261 RG KPSDH PV + L Sbjct: 241 DVRGRDKPSDHVPVWIDL 258 >gi|91977274|ref|YP_569933.1| exodeoxyribonuclease III [Rhodopseudomonas palustris BisB5] gi|91683730|gb|ABE40032.1| Exodeoxyribonuclease III [Rhodopseudomonas palustris BisB5] Length = 263 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 132/259 (50%), Positives = 177/259 (68%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+R RI +L +W+K PD++CLQE K D+ FP E +++L Y+I T GQK Sbjct: 1 MRIATWNVNSVRQRIDHLVSWLKACEPDVVCLQEIKCVDEAFPREPIEALGYNIVTHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 ++NGVA+LSKY E L GD+ DV ARF+E ++ +R+ LYLP+GNP+ + K Sbjct: 61 TFNGVALLSKYPLEEATPRLAGDETDVHARFLEGVVSLKRGVVRVACLYLPNGNPVETEK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+SW+ R L+++ +RL+ EEPLI AGD+N+IPQ D YNP W +DA F + R+SF Sbjct: 121 YPYKLSWMSRLLQYSKERLKTEEPLILAGDFNVIPQASDVYNPAGWVDDALFRPQTRESF 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q L +G TDA+RAT D Y+FWDY A +W KN GIRIDH++LSP+AT L ID+ Sbjct: 181 QALLGLGLTDALRATTDAPGQYTFWDYQAGAWQKNWGIRIDHLLLSPQATDRLVGVGIDS 240 Query: 244 KPRGWTKPSDHTPVIVSLD 262 R W KPSDH PV D Sbjct: 241 HVRSWEKPSDHVPVWADFD 259 >gi|77463209|ref|YP_352713.1| exodeoxyribonuclease III [Rhodobacter sphaeroides 2.4.1] gi|77387627|gb|ABA78812.1| Exodeoxyribonuclease III [Rhodobacter sphaeroides 2.4.1] Length = 259 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 121/258 (46%), Positives = 169/258 (65%), Gaps = 1/258 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+N+N ++AR+ L AW++ PD++ LQE K+ D+ FP + +H+ET GQK Sbjct: 1 MKIATFNINGVKARLEALLAWLEAAEPDVVLLQEIKSVDEGFPRAAFEDKGWHLETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVAILS+ ++V LPGD DVQAR+IEAT + + +R+ LYLP+GNP K Sbjct: 61 GFNGVAILSRLPLEDVVRGLPGDPEDVQARWIEAT-VVGERAVRVCGLYLPNGNPAPGPK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 YD K+ W++R A++ L EEP++ AGDYN+IPQ D P +W DA F E R +F Sbjct: 120 YDYKLGWMERMKARAAELLATEEPVVLAGDYNVIPQAEDAARPEVWVTDALFLPESRAAF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +++ N+G+T+A RA YSFWDY A +W KN GIRIDH++LSP+A L+ RID Sbjct: 180 RRIVNLGYTEAFRARTFGPGHYSFWDYQAGAWEKNNGIRIDHLLLSPQAADLMTDVRIDR 239 Query: 244 KPRGWTKPSDHTPVIVSL 261 + R KPSDH PV V L Sbjct: 240 EVRSGEKPSDHVPVWVEL 257 >gi|126462083|ref|YP_001043197.1| exodeoxyribonuclease III [Rhodobacter sphaeroides ATCC 17029] gi|126103747|gb|ABN76425.1| Exodeoxyribonuclease III [Rhodobacter sphaeroides ATCC 17029] Length = 259 Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats. Identities = 121/258 (46%), Positives = 169/258 (65%), Gaps = 1/258 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+N+N ++AR+ L AW++ PD++ LQE K+ D+ FP + +H+ET GQK Sbjct: 1 MKIATFNINGVKARLEALLAWLEAAEPDVVLLQEIKSVDEGFPRAAFEDKGWHLETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVAILS+ ++V LPGD DVQAR+IEAT + + +R+ LYLP+GNP K Sbjct: 61 GFNGVAILSRLPLEDVVRGLPGDPEDVQARWIEAT-VVGERAVRVCGLYLPNGNPAPGPK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 YD K+ W++R A++ L EEP++ AGDYN+IPQ D P +W DA F E R +F Sbjct: 120 YDYKLGWMERMKARAAELLATEEPVVLAGDYNVIPQAEDAARPEVWVTDALFLPESRAAF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +++ N+G+T+A RA YSFWDY A +W KN GIRIDH++LSP+A L+ RID Sbjct: 180 RRILNLGYTEAFRARTFGPGHYSFWDYQAGAWEKNNGIRIDHLLLSPQAADLMTDVRIDR 239 Query: 244 KPRGWTKPSDHTPVIVSL 261 + R KPSDH PV V L Sbjct: 240 EVRSGEKPSDHVPVWVEL 257 >gi|121605670|ref|YP_982999.1| exodeoxyribonuclease III Xth [Polaromonas naphthalenivorans CJ2] gi|120594639|gb|ABM38078.1| Exodeoxyribonuclease III [Polaromonas naphthalenivorans CJ2] Length = 260 Score = 223 bits (567), Expect = 3e-56, Method: Composition-based stats. Identities = 93/260 (35%), Positives = 137/260 (52%), Gaps = 1/260 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ R+ + W+ N D++CLQE K D FP + L++ Y GQK Sbjct: 1 MKIATWNVNSLTVRLPQVLDWLAANPVDVLCLQELKLSDDKFPLQELEAAGYQSAVFGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAILS+ IV ++ G + AT + T +R+ N Y +G S K Sbjct: 61 TYNGVAILSRTPARNIVKNITGFTDEQSRVI-AATLDMPTGEVRVVNGYFVNGQSPGSEK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 ++ K+ W++ + + L L+ GD+NI D Y+P T E RQ F Sbjct: 120 FEYKMKWLESLRNWLREELAEHPNLVLLGDFNITADDRDSYDPEGLRETIHHTSEERQHF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q L +G DA R YS+WDY ++ +N+G+RIDHI++S L+ S ID Sbjct: 180 QALVKLGLNDAFRMFDQPEKSYSWWDYREMAFRRNRGLRIDHILVSEALKPLVRSCVIDK 239 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 PR +PSDH PV++ LD+ Sbjct: 240 LPRKNERPSDHVPVVLELDL 259 >gi|225023438|ref|ZP_03712630.1| hypothetical protein EIKCOROL_00296 [Eikenella corrodens ATCC 23834] gi|224943787|gb|EEG24996.1| hypothetical protein EIKCOROL_00296 [Eikenella corrodens ATCC 23834] Length = 255 Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats. Identities = 94/259 (36%), Positives = 139/259 (53%), Gaps = 4/259 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS++ R+ +++ W+ ++ PD++CLQE K + FP + L Y GQK Sbjct: 1 MKIATWNVNSLKVRLPHVSDWLIQHQPDVLCLQELKLDQDQFPLSAFEMLGYRAVWSGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAILSK + + T LP D Q R I AT +R+ ++Y +G + S K Sbjct: 61 TYNGVAILSKEEVQNVHTGLPALPNDPQRRVIAATIGG----VRVVDVYCVNGEAVGSEK 116 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K W F L L+ GD+NI P D Y+P W+ + E R F Sbjct: 117 FAYKQQWFAALAEFIRSELAQYPELVLLGDFNIAPADLDVYDPEKWQGKILCSAEERAWF 176 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q L ++G TD++R H LY++WDY + + + G+RIDHI+ S L +A +DT Sbjct: 177 QTLLDLGLTDSLRRLHPAEPLYTWWDYRMNMFRRKLGLRIDHILASQALLPRLAAAGVDT 236 Query: 244 KPRGWTKPSDHTPVIVSLD 262 PR +PSDH PV + Sbjct: 237 APRALERPSDHAPVWAEFE 255 >gi|149914968|ref|ZP_01903497.1| exodeoxyribonuclease III [Roseobacter sp. AzwK-3b] gi|149811156|gb|EDM70993.1| exodeoxyribonuclease III [Roseobacter sp. AzwK-3b] Length = 260 Score = 222 bits (565), Expect = 4e-56, Method: Composition-based stats. Identities = 117/259 (45%), Positives = 163/259 (62%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A++N+N I+AR L W+ E PD++ LQE K+ D+ FP E + Y +ET GQK Sbjct: 1 MKIASFNINGIKARAQALTDWLDEAQPDVVVLQEIKSVDEGFPCELFEDRGYRVETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 S+NGVAILS+ ++ LPGDD D QAR+IE T + +R+ LYLP+GNP K Sbjct: 61 SFNGVAILSRLPLEDVTRGLPGDDEDEQARWIEGTVIGDKAAVRVCGLYLPNGNPAPGPK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 YD K++W++R A L EEP + AGDYN+IPQ D P W DA E R +F Sbjct: 121 YDYKLAWMERLKARAEALLAAEEPALMAGDYNVIPQDEDAKRPEAWRKDALALPETRAAF 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +++ N+GFT+A RA H Y+FWDY A +W+++ GIRIDH +L+P+A LL +ID Sbjct: 181 RRIVNLGFTEAFRAFHKGPSHYTFWDYQAGAWNRDDGIRIDHFLLTPQAADLLGDCQIDR 240 Query: 244 KPRGWTKPSDHTPVIVSLD 262 R KPSDH P+ ++LD Sbjct: 241 DIRDREKPSDHVPIWITLD 259 >gi|158424436|ref|YP_001525728.1| exodeoxyribonuclease III [Azorhizobium caulinodans ORS 571] gi|158331325|dbj|BAF88810.1| exodeoxyribonuclease III [Azorhizobium caulinodans ORS 571] Length = 262 Score = 222 bits (565), Expect = 5e-56, Method: Composition-based stats. Identities = 120/260 (46%), Positives = 168/260 (64%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+R R + AW+KE PD++CLQE K + + FP E ++L Y++ GQK Sbjct: 1 MRIATWNVNSVRLRTEHAVAWLKEAQPDVVCLQEIKCQTEQFPREPFEALGYNVAVHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVAILSK ++ L GDD DVQARFIEA ++ +R+ +YLP+GNP + K Sbjct: 61 GFNGVAILSKRPLEDVTNGLAGDDSDVQARFIEAVVSVPGGVVRVCCIYLPNGNPPQTEK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 YD K+ ++ R F RL+LEEPLI AGD+N+IP D +P W DA + R +F Sbjct: 121 YDYKLGFMARLKAFTESRLKLEEPLILAGDFNVIPDARDAADPAAWVEDALYLPRTRAAF 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +++ N+G TDA+RAT D L++FWDY A +W ++ GIRIDH++LSP+A L A ID Sbjct: 181 REIINLGMTDALRATSDAERLFTFWDYQAGAWQRDFGIRIDHLLLSPQAADRLIGAGIDK 240 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 R +PSDH P + L + Sbjct: 241 HLRALERPSDHVPAWIDLKM 260 >gi|254509791|ref|ZP_05121858.1| exodeoxyribonuclease III [Rhodobacteraceae bacterium KLH11] gi|221533502|gb|EEE36490.1| exodeoxyribonuclease III [Rhodobacteraceae bacterium KLH11] Length = 259 Score = 222 bits (565), Expect = 5e-56, Method: Composition-based stats. Identities = 126/260 (48%), Positives = 171/260 (65%), Gaps = 1/260 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+N+N I+AR L W+ + PD++ LQE K+ D+NFP E + Y++E GQK Sbjct: 1 MKIATFNINGIKARAEALPRWLDDAQPDVVLLQEIKSIDENFPREIFEDRGYNVEAHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 S+NGVAILSK Q ++ LPGDD+D QAR+IEAT + + +RI LYLP+GNP+ K Sbjct: 61 SFNGVAILSKLQLEDVTRGLPGDDMDEQARWIEAT-VVGKKAVRICGLYLPNGNPVPGPK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 YD K++W++R A L EEP + AGDYNIIPQ D P W DA F E R ++ Sbjct: 120 YDYKLAWMERLYDRARALLAAEEPALMAGDYNIIPQAEDAKRPNAWREDALFRPESRAAY 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +K+ N+GFT+A RA YSFWDY A +W+KN GIRIDH +L+P+ L+ RID+ Sbjct: 180 RKILNLGFTEAFRARTQGPGHYSFWDYQAGAWNKNDGIRIDHFLLTPQTADLMRDCRIDS 239 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 + RG KPSDH PV + LD+ Sbjct: 240 EVRGHEKPSDHVPVWIDLDL 259 >gi|167647089|ref|YP_001684752.1| exodeoxyribonuclease III Xth [Caulobacter sp. K31] gi|167349519|gb|ABZ72254.1| exodeoxyribonuclease III Xth [Caulobacter sp. K31] Length = 262 Score = 221 bits (564), Expect = 6e-56, Method: Composition-based stats. Identities = 109/262 (41%), Positives = 151/262 (57%), Gaps = 2/262 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ AR+ + W + PD+ LQE K D+ FP E + L Y++ GQK Sbjct: 1 MRIATWNVNSVNARLERVLEWFESAAPDVAVLQEIKCIDEKFPTEAFERLGYNVAVHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT--QTLRIGNLYLPHGNPITS 121 +YNGVA+LSK+ ++ LP D + R+ +YLP+GNP+ + Sbjct: 61 TYNGVAMLSKFPLEDVRRGLPFLHDDEVDEQSRYIEAVIGAPTPFRMVGIYLPNGNPVDT 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 K+D K++W++R A L LEEPL+ AGDYN+IP+ D NP W NDA F LE R Sbjct: 121 EKFDYKLAWMRRLHAHAQGLLALEEPLVIAGDYNVIPEVEDVANPEAWVNDALFRLESRG 180 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +F+ L+N+G TDA Y+FWDY A +W +N GIRIDH++LSP+A L I Sbjct: 181 AFRALKNLGLTDAYMQADGAPGGYTFWDYQAGAWPRNLGIRIDHLLLSPQAADKLAGVVI 240 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 R KPSDH PV+ L + Sbjct: 241 HRDERDKEKPSDHVPVVAELAL 262 >gi|260433435|ref|ZP_05787406.1| exodeoxyribonuclease III [Silicibacter lacuscaerulensis ITI-1157] gi|260417263|gb|EEX10522.1| exodeoxyribonuclease III [Silicibacter lacuscaerulensis ITI-1157] Length = 259 Score = 221 bits (564), Expect = 6e-56, Method: Composition-based stats. Identities = 125/260 (48%), Positives = 171/260 (65%), Gaps = 1/260 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A++N+N I+AR L W+ + PD+ LQE K+ D+NFP E + Y++ET GQK Sbjct: 1 MKIASFNINGIKARADALLRWLDDARPDVAVLQEIKSVDENFPREIFEERGYNVETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 S+NGVA+LSK ++ LPGDD D QAR+IEAT + + LRI LYLP+GNP K Sbjct: 61 SFNGVAVLSKLPLEDVTRGLPGDDDDEQARWIEAT-VVGKKALRICGLYLPNGNPAPGPK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 +D K++W++R + A + L+ EEP + AGDYN+IPQ D P W DA F E R +F Sbjct: 120 FDYKLAWMERLHQRAVELLKSEEPALMAGDYNVIPQAEDAKRPEAWREDALFRSESRAAF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +++ N+GFTDA RA Y+FWDY A +W++N GIRIDH +L+P+A LL RID Sbjct: 180 RRILNLGFTDAFRARTQGPGHYTFWDYQAGAWNRNDGIRIDHFLLTPQAADLLQDCRIDA 239 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 + RG KPSDH P+ V LDI Sbjct: 240 EVRGQEKPSDHVPIWVDLDI 259 >gi|254464825|ref|ZP_05078236.1| exodeoxyribonuclease III [Rhodobacterales bacterium Y4I] gi|206685733|gb|EDZ46215.1| exodeoxyribonuclease III [Rhodobacterales bacterium Y4I] Length = 268 Score = 221 bits (564), Expect = 6e-56, Method: Composition-based stats. Identities = 130/269 (48%), Positives = 168/269 (62%), Gaps = 10/269 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+N+N I+AR L W+ E PD++ LQE K+ D+ FP E + Y++ET GQK Sbjct: 1 MKIATFNINGIKARAQALPDWLDEAQPDVVVLQEIKSVDEAFPREIFEERGYNVETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122 S+NGVAILSK ++ LPGDD D QAR+IEAT T Q +RI LYLP+GNP+ Sbjct: 61 SFNGVAILSKLPLEDVRRGLPGDDSDEQARWIEATVTG-KQAIRICGLYLPNGNPVELEA 119 Query: 123 --------KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 KY K++W++R A L E P + AGDYNIIPQ D P W DA Sbjct: 120 DGSPVAGGKYAYKLAWMERLKARAEALLADEMPALMAGDYNIIPQAEDAKRPEAWAEDAL 179 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 F + R +FQ++ N+GFT+A RA H YSFWDY A +W++N GIRIDHI+L+P+A Sbjct: 180 FRPQSRAAFQRIVNLGFTEAFRARHQGPGHYSFWDYQAGAWNRNDGIRIDHILLTPQAAD 239 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 LL +ID RG KPSDH PV V LDI Sbjct: 240 LLLDCQIDKDVRGREKPSDHVPVWVELDI 268 >gi|319792482|ref|YP_004154122.1| exodeoxyribonuclease iii xth [Variovorax paradoxus EPS] gi|315594945|gb|ADU36011.1| exodeoxyribonuclease III Xth [Variovorax paradoxus EPS] Length = 261 Score = 221 bits (564), Expect = 6e-56, Method: Composition-based stats. Identities = 95/258 (36%), Positives = 138/258 (53%), Gaps = 1/258 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ AR+ ++ W+ N D++CLQE K D FP E L+S Y GQK Sbjct: 1 MKIATWNVNSLTARLQHVLDWLIANPVDVLCLQELKMTDDKFPLEVLKSAGYEAAVFGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAILS ++V ++ G + AT T LR+ N Y +G S K Sbjct: 61 TYNGVAILSLAPMRDVVKNIGGFTDEQSRVI-AATVETPTGPLRVVNGYFVNGQAPGSDK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 ++ K+ W+ + Q L L+ GD+NI P+ D ++P+ + T E R+ F Sbjct: 120 FEYKLKWLDALRDWLRQELVAHPNLVLLGDFNITPEDRDSFDPVGLKETIHHTTEEREHF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + L +G TD+ R YS+WDY + KN+G+RIDHI++S + ID Sbjct: 180 KALLGLGLTDSFRMFEQPEKSYSWWDYRMLGYQKNRGLRIDHILVSETLLPRVKGCIIDR 239 Query: 244 KPRGWTKPSDHTPVIVSL 261 PR W KPSDH PV++ L Sbjct: 240 VPRKWEKPSDHAPVVLDL 257 >gi|89055306|ref|YP_510757.1| exodeoxyribonuclease III [Jannaschia sp. CCS1] gi|88864855|gb|ABD55732.1| Exodeoxyribonuclease III [Jannaschia sp. CCS1] Length = 261 Score = 221 bits (564), Expect = 7e-56, Method: Composition-based stats. Identities = 128/259 (49%), Positives = 170/259 (65%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 ++ +AT+N+N ++ARI L W+ E PD+ LQE K+ D+NFP E L+ Y +ET GQ Sbjct: 1 MMRIATFNINGVKARIGALGDWLDEAKPDVALLQEIKSVDENFPREMLEDRGYTVETHGQ 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K +NGVAILSK ++ LPGDD D QAR+IEAT +TQ +R+ LYLP+GNP Sbjct: 61 KGFNGVAILSKLPLEDVSRGLPGDDTDEQARWIEATVMGDTQAVRVCGLYLPNGNPTPGP 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 KYD K++W++R R A L E P++ AGDYNIIPQ D P +W++DA E R + Sbjct: 121 KYDYKLAWMERMHRHAQGLLASEMPVVMAGDYNIIPQDADAARPEVWQDDALARSESRAA 180 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F++L +GFT+A RA + +YSFWDY A +W+KN GIRIDH +LSPEA LL I+ Sbjct: 181 FRRLLALGFTEAFRARNQAPGMYSFWDYQAGAWNKNDGIRIDHHLLSPEAADLLQECWIE 240 Query: 243 TKPRGWTKPSDHTPVIVSL 261 RG KPSDH PV + L Sbjct: 241 KDVRGRDKPSDHVPVWIDL 259 >gi|170740918|ref|YP_001769573.1| exodeoxyribonuclease III Xth [Methylobacterium sp. 4-46] gi|168195192|gb|ACA17139.1| exodeoxyribonuclease III Xth [Methylobacterium sp. 4-46] Length = 270 Score = 221 bits (563), Expect = 7e-56, Method: Composition-based stats. Identities = 123/265 (46%), Positives = 172/265 (64%), Gaps = 2/265 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + TWNVNSIR R+ +L A+++E PD++CLQE K D++FP ++ Y + T GQK Sbjct: 1 MRITTWNVNSIRQRLGHLLAFLEEAKPDVVCLQELKCVDESFPRTEIEEAGYVVATHGQK 60 Query: 64 SYNGVAILSKYQP--IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 ++NGVA+L++ E+ LPGD D QAR+IEA LR+ ++YLP+GNP+ + Sbjct: 61 AFNGVALLARQPLPLRELRRGLPGDPEDAQARYIEALIPTPAANLRVASIYLPNGNPVGT 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 K+DDK+++++R A Q E EE L+ AGDYN+IP+P D +P W DA F E R Sbjct: 121 PKFDDKLAFLRRLTAHARQLREREEVLVLAGDYNVIPEPVDVADPAAWLGDALFRPESRA 180 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +F+ L N GF DA+RA + LY+FWDY A +W +N GIRIDH++LSP+A L SA + Sbjct: 181 AFRALLNEGFADALRACDERPGLYTFWDYQAGAWPRNLGIRIDHLLLSPQALDRLVSASV 240 Query: 242 DTKPRGWTKPSDHTPVIVSLDIPEP 266 RG KPSDH PV V LD+ P Sbjct: 241 QKHLRGLEKPSDHVPVTVELDLDRP 265 >gi|222085777|ref|YP_002544307.1| exodeoxyribonuclease III protein [Agrobacterium radiobacter K84] gi|221723225|gb|ACM26381.1| exodeoxyribonuclease III protein [Agrobacterium radiobacter K84] Length = 263 Score = 221 bits (563), Expect = 8e-56, Method: Composition-based stats. Identities = 148/260 (56%), Positives = 193/260 (74%), Gaps = 1/260 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+N ++ARI NL W+K+++PDI CLQE KT D+ FP +++L YH+ET GQK Sbjct: 1 MKIATWNINGVKARIENLCQWLKDSDPDIACLQEIKTVDEGFPRLEIEALGYHVETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT-LRIGNLYLPHGNPITST 122 +NGVAILSK +P E+ LPGDD D QARFIEA F++ LR+ LYLP+GNP+ + Sbjct: 61 GFNGVAILSKAKPDEVTRGLPGDDSDEQARFIEAVFSVPDHGALRVCCLYLPNGNPVDTE 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 KY K++W++R +FA+ RL LEEP+I AGDYN+IP+PHDC++P +WENDA F + RQ+ Sbjct: 121 KYPYKLAWMERLRKFAADRLALEEPIILAGDYNVIPEPHDCFDPKVWENDALFLPQTRQA 180 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F++L+N+GFTDA+R T D LYSFWDY A +W KN GIRIDH+MLSPEA L S I+ Sbjct: 181 FRQLENLGFTDAVRTTTDAVKLYSFWDYQAGAWPKNNGIRIDHLMLSPEAADRLTSTAIE 240 Query: 243 TKPRGWTKPSDHTPVIVSLD 262 R W KPSDH PVI LD Sbjct: 241 KHMRAWEKPSDHVPVIAHLD 260 >gi|16126254|ref|NP_420818.1| exodeoxyribonuclease III [Caulobacter crescentus CB15] gi|221235027|ref|YP_002517463.1| exodeoxyribonuclease III [Caulobacter crescentus NA1000] gi|13423482|gb|AAK23986.1| exodeoxyribonuclease III [Caulobacter crescentus CB15] gi|220964199|gb|ACL95555.1| exodeoxyribonuclease III [Caulobacter crescentus NA1000] Length = 262 Score = 221 bits (563), Expect = 8e-56, Method: Composition-based stats. Identities = 109/262 (41%), Positives = 147/262 (56%), Gaps = 2/262 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSI AR+ + AW + PD+ LQE K D+ FP E + L Y++ GQK Sbjct: 1 MRIATWNVNSINARLEGVLAWFESEAPDVAVLQEIKCVDEKFPTEAFERLGYNVAVHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN--TQTLRIGNLYLPHGNPITS 121 +YNGVA+LSK+ ++ LP D + R+ +YLP+GNPI + Sbjct: 61 TYNGVALLSKHPIEDVRKGLPFLSEDEVDEQARYIEAVIAAPTPFRVVGIYLPNGNPIGT 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 K+ K+SW++R A L EEPL+ AGDYN+IP+ D NP W DA F E R Sbjct: 121 EKFAYKLSWMRRLHAHAQGLLAFEEPLVIAGDYNVIPEVEDVANPQAWLGDALFQPESRA 180 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +F+ L+N+GF DA Y+FWDY A +W +N GIRIDH++LSP+A L I Sbjct: 181 AFRALKNLGFADAYMQADGAPGGYTFWDYQAGAWQRNLGIRIDHLLLSPQAADRLTGLVI 240 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 R KPSDH PV+ I Sbjct: 241 HRDERDKEKPSDHVPVVGRFRI 262 >gi|254475570|ref|ZP_05088956.1| exodeoxyribonuclease III [Ruegeria sp. R11] gi|214029813|gb|EEB70648.1| exodeoxyribonuclease III [Ruegeria sp. R11] Length = 268 Score = 221 bits (563), Expect = 8e-56, Method: Composition-based stats. Identities = 128/269 (47%), Positives = 168/269 (62%), Gaps = 10/269 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+N+N I+ARI+ L W+ + PD++ LQE K+ D+ FP E + Y++ET GQK Sbjct: 1 MKIATFNINGIKARINALPEWLDDAQPDVVVLQEIKSVDEAFPRELFEDRGYNVETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122 S+NGVAILSK ++ LPGDD D QAR+IEAT + Q +RI LYLP+GNP+ Sbjct: 61 SFNGVAILSKLPLEDVRRGLPGDDSDEQARWIEAT-VVGKQAIRICGLYLPNGNPVELNA 119 Query: 123 --------KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 KY K++W++R A L+ E P + AGDYNIIPQ D P W DA Sbjct: 120 DGTPVEGGKYAYKLAWMERMRARAQALLDEEMPALMAGDYNIIPQAEDAKKPEAWLEDAL 179 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R +FQ++ N+GFT+A RA H YSFWDY A +W +N GIRIDH +LSP+A Sbjct: 180 HRTESRAAFQRIVNLGFTEAFRARHQGPGHYSFWDYQAGAWQRNNGIRIDHFLLSPQAAD 239 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 L+ +ID RG KPSDH PV V LDI Sbjct: 240 LMLDCQIDKDVRGRDKPSDHVPVWVELDI 268 >gi|295688833|ref|YP_003592526.1| exodeoxyribonuclease III Xth [Caulobacter segnis ATCC 21756] gi|295430736|gb|ADG09908.1| exodeoxyribonuclease III Xth [Caulobacter segnis ATCC 21756] Length = 262 Score = 221 bits (562), Expect = 1e-55, Method: Composition-based stats. Identities = 106/257 (41%), Positives = 147/257 (57%), Gaps = 2/257 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ AR+ + W + PD+ LQE K D+ FP E + L Y++ GQK Sbjct: 1 MRIATWNVNSVNARLERVLGWFEAEAPDVAVLQEIKCVDEKFPAEAFERLGYNVVVHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT--QTLRIGNLYLPHGNPITS 121 +YNGVA+LSK+ ++ LP D + R+ +YLP+GNPI + Sbjct: 61 TYNGVALLSKHPVEDVRKGLPFLSEDEVDEQARYVEAVIGAQTPFRVVGIYLPNGNPIGT 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 K+D K++W++R A L EE L+ AGDYN+IP+ D NP W DA F E R Sbjct: 121 EKFDYKLAWMRRLHAHAQNLLAFEENLVIAGDYNVIPEAQDVANPEAWLGDALFRPESRA 180 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +F+ L+N+G TDA T Y+FWDY A +W +N GIRIDH++LSP+A L + I Sbjct: 181 AFRALKNLGLTDAYMQTDGAPGGYTFWDYQAGAWQRNLGIRIDHLLLSPQAADRLENVVI 240 Query: 242 DTKPRGWTKPSDHTPVI 258 R KPSDH PV+ Sbjct: 241 HRDERDKEKPSDHVPVV 257 >gi|260426641|ref|ZP_05780620.1| exodeoxyribonuclease III [Citreicella sp. SE45] gi|260421133|gb|EEX14384.1| exodeoxyribonuclease III [Citreicella sp. SE45] Length = 260 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 120/257 (46%), Positives = 160/257 (62%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+N+N I+AR L W+ E PD+ LQE K+ D+ FP E + Y++ET GQK Sbjct: 1 MKIATFNINGIKARHAALLDWLDEAQPDVALLQEIKSVDEGFPREPFEERGYNVETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVAILSK ++ LPGDD D QAR+IEAT T L++ LYLP+GNP K Sbjct: 61 GFNGVAILSKLPLEDVTRGLPGDDEDEQARWIEATVVGETHALQLCGLYLPNGNPAPGPK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 YD K++W++R A L E P + AGDYN+IPQ D P W DA + + R +F Sbjct: 121 YDYKLAWMERLEARARALLADEMPAMMAGDYNVIPQAEDAAKPESWTEDALYLPQTRAAF 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +++ N+GFT+A R H YSFWDY A +W +N GIRIDHI+L+P+A L+ +ID Sbjct: 181 RRILNLGFTEAFRTRHPEPGHYSFWDYQAGAWQRNNGIRIDHILLTPQAADLMRDVQIDR 240 Query: 244 KPRGWTKPSDHTPVIVS 260 RG KPSDH PV V Sbjct: 241 DIRGRDKPSDHVPVWVD 257 >gi|82703533|ref|YP_413099.1| exodeoxyribonuclease III [Nitrosospira multiformis ATCC 25196] gi|82411598|gb|ABB75707.1| Exodeoxyribonuclease III [Nitrosospira multiformis ATCC 25196] Length = 277 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 86/258 (33%), Positives = 141/258 (54%), Gaps = 5/258 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS++ R+ + W+ N PD++CLQETK +D++FP + + Y GQK Sbjct: 1 MKIATWNVNSLKVRLPQVLEWLTLNQPDVLCLQETKLQDEHFPVSEIAAAGYQTIYSGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVA+LS+ E+ T +PG + + + + + P+G +TS K Sbjct: 61 TYNGVALLSRQPVSEVFTGMPGFEDPQKRLLGGVHDDVCVVCIYV-----PNGEHVTSEK 115 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W+ + + L L+ GD+NI P+ D ++ +WE F+ R +F Sbjct: 116 YQYKLRWLAALREWLREMLSRHRKLVVLGDFNIAPEDCDVHDSKLWEGKVLFSELERAAF 175 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +++ ++GF D+ R +++WDY ++ +N G+RIDHI+LS E + + ID Sbjct: 176 REVLDLGFIDSFRLFDQPEKSFTWWDYRMMAFRRNMGLRIDHILLSRELAGMCTACVIDK 235 Query: 244 KPRGWTKPSDHTPVIVSL 261 R +PSDH PVIV L Sbjct: 236 ATRRLERPSDHAPVIVEL 253 >gi|56476029|ref|YP_157618.1| exodeoxyribonuclease III [Aromatoleum aromaticum EbN1] gi|56312072|emb|CAI06717.1| Exodeoxyribonuclease III [Aromatoleum aromaticum EbN1] Length = 253 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 89/260 (34%), Positives = 141/260 (54%), Gaps = 7/260 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS++ R+ ++ W+ N PD++CLQE K EDK+FP +++ YH GQK Sbjct: 1 MKIATWNVNSLKVRLPHVLDWLAANRPDVLCLQELKLEDKSFPSAEIEAAGYHAAFSGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAILS+ I +PG D + + +R+ Y P+G + S K Sbjct: 61 TYNGVAILSRSALAGIGHGIPGFDDEQKRVLAATVNG-----VRVICGYFPNGQAVGSEK 115 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W+ + + L+ + L+ GD+NI P+ D + W+++ + R +F Sbjct: 116 FAYKLRWLAALTEWLREELKAHQRLVLTGDFNIAPEDRDAHPD--WKDEIHVSPAERAAF 173 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 L +G DA R +S+WDY ++ +N G+RIDHI+LSP + + ID Sbjct: 174 AALTGLGLADAYRLFPQDDKSFSWWDYRMGAFRRNFGLRIDHILLSPALRDVCCACTIDK 233 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 PR +PSDH PVI L++ Sbjct: 234 APRKLERPSDHAPVIAELEL 253 >gi|310823161|ref|YP_003955519.1| exodeoxyribonuclease III [Stigmatella aurantiaca DW4/3-1] gi|309396233|gb|ADO73692.1| Exodeoxyribonuclease III [Stigmatella aurantiaca DW4/3-1] Length = 257 Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats. Identities = 103/259 (39%), Positives = 146/259 (56%), Gaps = 5/259 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A+WNVNS+RAR L W+K + PD++CLQE K D +FP E ++ YH T GQK Sbjct: 1 MKIASWNVNSVRARQERLLNWLKAHQPDVLCLQELKCVDADFPTEAVREAGYHAVTHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAILSK +P ++V L D AR I AT + +R+ + Y+P+G + S Sbjct: 61 TYNGVAILSKAEPSDVVLGLSDGVEDSHARLIAATVSG----VRVVSAYVPNGQAVDSPA 116 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W R R+ R ++PL+ GD+N+ P+P D Y+P +WE FTL+ R + Sbjct: 117 YVYKLEWYSRLRRYLEARHTPDQPLVLCGDWNVAPEPIDVYDPAVWEGQTLFTLKERDAL 176 Query: 184 QKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 Q++ G D R H +S+WDY S+ KN G+RIDHI + L A ID Sbjct: 177 QQVCAFGLADTFRKLHPGVEKKFSWWDYRGLSFPKNLGVRIDHIFATAPLVQRLVKAEID 236 Query: 243 TKPRGWTKPSDHTPVIVSL 261 + R +PSDH PV Sbjct: 237 REERKGKQPSDHAPVWAEF 255 >gi|146277242|ref|YP_001167401.1| exodeoxyribonuclease III Xth [Rhodobacter sphaeroides ATCC 17025] gi|145555483|gb|ABP70096.1| Exodeoxyribonuclease III [Rhodobacter sphaeroides ATCC 17025] Length = 259 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 123/258 (47%), Positives = 170/258 (65%), Gaps = 1/258 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+N+N I+ARI + AW++ +PD++ LQE K+ D+ FP + +H+ET GQK Sbjct: 1 MKIATYNINGIKARIEAVLAWLEAASPDVVLLQEIKSVDETFPRAVFEDRGWHLETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVAILS+ ++V LPGD DVQAR+IEAT + +R+ LYLP+GNP K Sbjct: 61 GFNGVAILSRLPLEDVVRGLPGDAEDVQARWIEATVVGQ-RAVRVCGLYLPNGNPAPGPK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 YD K++WI R + A++ LE E+P++ AGDYN+IPQ D P W DA F E R +F Sbjct: 120 YDYKLAWIARMKQRAAELLETEDPVVLAGDYNVIPQAEDAARPEAWVTDALFLPESRAAF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +++ N+G+T+A RA YSFWDY A +W KN GIRIDH++LSP+A L+ RID Sbjct: 180 RRILNLGYTEAFRARSFGPGHYSFWDYQAGAWEKNNGIRIDHLLLSPQAADLMTDVRIDR 239 Query: 244 KPRGWTKPSDHTPVIVSL 261 + R KPSDH PV V L Sbjct: 240 EVRAGEKPSDHVPVWVEL 257 >gi|72160662|ref|YP_288319.1| exodeoxyribonuclease III [Thermobifida fusca YX] gi|71914394|gb|AAZ54296.1| Exodeoxyribonuclease III [Thermobifida fusca YX] Length = 264 Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats. Identities = 84/264 (31%), Positives = 127/264 (48%), Gaps = 3/264 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+RAR +AAW++ ++ D++ LQETK D FP L Y + G Sbjct: 1 MRLATWNVNSVRARSERIAAWLRRSDVDVVALQETKCRDDQFPTAVFTELGYEVAHHGLS 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT-FTINTQTLRIGNLYLPHGNPITST 122 +NGVAI S+ ++ PG + EA + +R+ +LY+P+G I Sbjct: 61 QWNGVAIASRVGLSDVQIGFPGQPGWGEPEEAEARAISAVCGGVRVWSLYVPNGREIDHP 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIF--AGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 Y K+ W+ R L + GD+NI P D ++ +E T R Sbjct: 121 HYTYKLQWLARLREAGEAWLSEDPKAQIALCGDWNIAPYDEDVWDMAEFEGRTHVTKPER 180 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 +F + + GFTD +R +Y++WDY ++ K KG+RID I+ SP A+ Sbjct: 181 DAFHAVVDAGFTDVVRPHAPGPGVYTYWDYKGLAFPKRKGMRIDFILASPALAERATDAK 240 Query: 241 IDTKPRGWTKPSDHTPVIVSLDIP 264 ID + R SDH PVI + Sbjct: 241 IDREERKGKGASDHAPVIADFQLD 264 >gi|114766201|ref|ZP_01445201.1| Exodeoxyribonuclease III [Pelagibaca bermudensis HTCC2601] gi|114541572|gb|EAU44615.1| Exodeoxyribonuclease III [Roseovarius sp. HTCC2601] Length = 260 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 121/258 (46%), Positives = 164/258 (63%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+N+N I+ARI L W+ E PD+ LQE K+ D+ FP E + + +ET GQK Sbjct: 1 MKIATFNINGIKARIGALTDWLDEAQPDVALLQEIKSVDEAFPREHFEERGWQVETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 S+NGVAILSK ++ LPGDD D QAR+IEAT + +R+ LYLP+GNP+ K Sbjct: 61 SFNGVAILSKLPLEDVTRGLPGDDEDEQARWIEATVIGESHAVRLCGLYLPNGNPVPGPK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 YD K++W+KR A + L E P + AGDYN+IPQ D P W DA + E R +F Sbjct: 121 YDYKLAWMKRLEARARELLASEMPAVMAGDYNVIPQAEDAAKPQAWIEDALYLPETRAAF 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +++ N+GFT+A RA YSFWDY A +W +N GIRIDH++L+P+A L+ +ID Sbjct: 181 RRILNLGFTEAFRARTQGPGHYSFWDYQAGAWQRNNGIRIDHLLLTPQAADLMTDVQIDR 240 Query: 244 KPRGWTKPSDHTPVIVSL 261 RG KPSDH PV + L Sbjct: 241 DIRGRDKPSDHVPVWIDL 258 >gi|329890230|ref|ZP_08268573.1| exodeoxyribonuclease III [Brevundimonas diminuta ATCC 11568] gi|328845531|gb|EGF95095.1| exodeoxyribonuclease III [Brevundimonas diminuta ATCC 11568] Length = 261 Score = 220 bits (560), Expect = 2e-55, Method: Composition-based stats. Identities = 114/260 (43%), Positives = 161/260 (61%), Gaps = 1/260 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ AR+ + WI+ NPD+ C QE K D+ FP E + L Y++ET GQK Sbjct: 1 MRIATWNVNSVNARLPTVLEWIQAANPDVACFQEIKCVDEKFPREAFEDLGYNVETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 SYNGVA+LSKY ++ LPGDD D QAR++EA + +R+ ++YLP+GNP+ + K Sbjct: 61 SYNGVALLSKYPLSDVRRGLPGDDGDEQARYLEALIEAP-RPIRVASIYLPNGNPLGTEK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K++W +R A + L LEEPL GDYN+IP+ D NP W DA F E R++F Sbjct: 120 FAYKLAWFQRLQNHARELLALEEPLALCGDYNVIPEAEDAKNPAAWAEDALFQPESREAF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + L+ +G D+ + ++FWDY A +W +N GIRID +LSP A + Sbjct: 180 RALKWLGLADSHELGREPAGTFTFWDYQAGAWQRNHGIRIDFALLSPHAADRFRAIETHR 239 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 + R KPSDH PV+V LD+ Sbjct: 240 EARDMEKPSDHVPVVVDLDL 259 >gi|126739465|ref|ZP_01755158.1| exodeoxyribonuclease III [Roseobacter sp. SK209-2-6] gi|126719565|gb|EBA16274.1| exodeoxyribonuclease III [Roseobacter sp. SK209-2-6] Length = 268 Score = 220 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 126/269 (46%), Positives = 168/269 (62%), Gaps = 10/269 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A++N+N I+AR L W+ E PD++ LQE K+ D+ FP E + Y++ET GQK Sbjct: 1 MKIASFNINGIKARAAALPQWLDEAQPDVVLLQEIKSVDEAFPRELFEERGYNVETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122 S+NGVAILSK +I LPGDD D QAR+IEAT + Q LRI LYLP+GNP+ Sbjct: 61 SFNGVAILSKLPLEDIRRGLPGDDSDEQARWIEAT-VVGKQALRICGLYLPNGNPVELEV 119 Query: 123 --------KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 KY K++W++R + A L E P + AGDYNIIPQ D P W DA Sbjct: 120 DGSPVAGGKYAYKLAWMERLHKRAQDLLAEETPALMAGDYNIIPQAEDAKRPEAWREDAL 179 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R ++Q++ N+GFT+A RA H YSFWDY A +W+++ GIRIDH +LSP+A Sbjct: 180 HRPESRAAYQQIVNLGFTEAFRARHQGPGHYSFWDYQAGAWNRDDGIRIDHFLLSPQAAD 239 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 LL +ID + RG KPSDH P+ V LD+ Sbjct: 240 LLRDCQIDKEIRGREKPSDHVPIWVDLDL 268 >gi|315498514|ref|YP_004087318.1| exodeoxyribonuclease iii xth [Asticcacaulis excentricus CB 48] gi|315416526|gb|ADU13167.1| exodeoxyribonuclease III Xth [Asticcacaulis excentricus CB 48] Length = 263 Score = 220 bits (559), Expect = 2e-55, Method: Composition-based stats. Identities = 113/264 (42%), Positives = 159/264 (60%), Gaps = 5/264 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + T+NVNS+ AR+ + W +E PD+ LQE K D+ FP+E + L Y+ GQK Sbjct: 1 MKIFTYNVNSVNARLPLILEWFEETQPDVCALQELKCLDEKFPYEPFERLGYNAAVHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 ++NGVA+LSK I++V LPG+ D Q+R+IEA + +R+ ++YLP+GNPI + K Sbjct: 61 TWNGVALLSKQPLIDVVRGLPGEPEDEQSRYIEAVVDG-SVPVRVTSIYLPNGNPIGTDK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K W KR A + L EE + +GD+N IP D Y W +DA + E R ++ Sbjct: 120 YPYKHRWYKRLQARAKEILAFEEISVLSGDFNTIPTKSDLYRESAWLDDALYQPETRAAY 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q L+N+G++DA + Y+FWDY A +W KN+GIRIDH +LSP+A L S I Sbjct: 180 QSLKNLGYSDACDLMPPEGNRYTFWDYQAGAWQKNEGIRIDHHLLSPQAADRLKSFEIHK 239 Query: 244 KPRGWT----KPSDHTPVIVSLDI 263 RG T KPSDH PV V LD+ Sbjct: 240 DARGRTHDDAKPSDHVPVGVELDV 263 >gi|255262040|ref|ZP_05341382.1| exodeoxyribonuclease III [Thalassiobium sp. R2A62] gi|255104375|gb|EET47049.1| exodeoxyribonuclease III [Thalassiobium sp. R2A62] Length = 259 Score = 220 bits (559), Expect = 3e-55, Method: Composition-based stats. Identities = 122/258 (47%), Positives = 169/258 (65%), Gaps = 1/258 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+N+N I+ARI+ L W+ E PD+ LQE K+ D+NFP E + Y++E+ GQK Sbjct: 1 MKIATFNINGIKARINALPDWLDEAQPDVAILQEIKSVDENFPRELFEERGYNVESHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 S+NGVA+LSK ++ LPGDD D QAR+IEAT + Q +R+ LYLP+GNP+ K Sbjct: 61 SFNGVAMLSKLPLEDVQRGLPGDDEDEQARWIEAT-VVGEQAVRLCGLYLPNGNPVPGPK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y+ K+SW++R L A L E+ + GD+NIIPQ D NP +W DA F E R ++ Sbjct: 120 YEYKLSWMERLLTRAKDLLAEEQLALITGDFNIIPQAEDAANPQVWREDALFRPESRAAW 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +++ N+G+T+A RA YSFWDY A +W+KN GIRIDH +L+P+ LL +ID Sbjct: 180 RRIVNLGYTEAFRARTHGPGHYSFWDYQAGAWNKNDGIRIDHFLLTPQCADLLRECKIDA 239 Query: 244 KPRGWTKPSDHTPVIVSL 261 + RG KPSDH PV V L Sbjct: 240 EIRGREKPSDHVPVWVEL 257 >gi|239814644|ref|YP_002943554.1| exodeoxyribonuclease III Xth [Variovorax paradoxus S110] gi|239801221|gb|ACS18288.1| exodeoxyribonuclease III Xth [Variovorax paradoxus S110] Length = 261 Score = 220 bits (559), Expect = 3e-55, Method: Composition-based stats. Identities = 90/259 (34%), Positives = 135/259 (52%), Gaps = 1/259 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ AR+ ++ W+ N D++CLQE K D FP + L+S Y GQK Sbjct: 1 MKIATWNVNSLTARLQHVLDWLIANPVDVLCLQELKMSDDKFPLDVLKSAGYEAAVFGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAILS ++ ++ G D AT LRI N Y +G + K Sbjct: 61 TYNGVAILSLAPMRDVARNIGGFTDDQSRVI-AATVETPAGPLRIVNGYFVNGQAPGTDK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 ++ K+ W++ + + L+ GD+NI P+ D ++P+ T E R+ F Sbjct: 120 FEYKMGWLRALREWLRAEMAAHPNLVLLGDFNIAPEDRDSFDPVGLAETIHHTTEEREHF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + L +G D+ R +S+WDY + KN+G+RIDHI++S + ID Sbjct: 180 KALLQLGLVDSFRLFEQPEKSFSWWDYRMLGYQKNRGLRIDHILVSEPLVPRVKGCIIDR 239 Query: 244 KPRGWTKPSDHTPVIVSLD 262 PR W KPSDH PV++ LD Sbjct: 240 VPRKWEKPSDHAPVVLDLD 258 >gi|255035926|ref|YP_003086547.1| exodeoxyribonuclease III Xth [Dyadobacter fermentans DSM 18053] gi|254948682|gb|ACT93382.1| exodeoxyribonuclease III Xth [Dyadobacter fermentans DSM 18053] Length = 260 Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats. Identities = 98/262 (37%), Positives = 143/262 (54%), Gaps = 3/262 (1%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 M+ + +AT+NVN + R+ L W+ E PD++CLQE K + FP + + Y Sbjct: 1 MNAMRIATYNVNGVNGRLPVLLRWLTETTPDVVCLQELKAPQEKFPEQAILEAGYKAIWH 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 GQKS+NGVAILS+ I + L +G LYLP+GNP Sbjct: 61 GQKSWNGVAILSRGD---IPAEIRRVLPGDPEDAHSRYIEAEIGGLTVGGLYLPNGNPAP 117 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 K+D K+ W R + A L +P++ GD+N++P D Y P W +DA F E R Sbjct: 118 GPKFDYKLRWFDRLITHAQGLLAAGKPVLLTGDFNVMPTELDVYKPESWVDDALFRPETR 177 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 +F KL + G+TDAIR + +Y+FWDY+ +++++N G+RIDH +LSP L +A Sbjct: 178 AAFAKLMDQGWTDAIRTLYPDEKIYTFWDYFRNAFARNAGLRIDHFLLSPNLAPRLIAAG 237 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 +D + RGW K SDH PV + L Sbjct: 238 VDKQVRGWEKTSDHAPVWIELK 259 >gi|317969204|ref|ZP_07970594.1| exodeoxyribonuclease III [Synechococcus sp. CB0205] Length = 273 Score = 219 bits (557), Expect = 4e-55, Method: Composition-based stats. Identities = 89/271 (32%), Positives = 140/271 (51%), Gaps = 1/271 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A+WNVNS+R R+ + AW++ + PD++CLQETK D FP + + + YH GQK Sbjct: 1 MRIASWNVNSVRTRLDQVLAWLQTHEPDVLCLQETKVSDDLFPLQAFEQIGYHCAISGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQA-RFIEATFTINTQTLRIGNLYLPHGNPITST 122 +YNGVA++S+ ++ D + + +RI NLY+P+G+ + S Sbjct: 61 AYNGVALISREPLEDVQVGFDALLPDAGPLSEQKRVISGMLDGVRILNLYVPNGSSLKSE 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 KY K+ W+ R+ + + E +PL GD+NI + D +P + R + Sbjct: 121 KYHYKLEWLACLQRYLAVQEEQGDPLCMVGDFNIGLEDRDLPDPQRLSGTIMASDPERSA 180 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 + TD R +S+WDY + +W ++ G RIDHI LS E ID Sbjct: 181 LRAALADRLTDVFRVFEPGSGHWSWWDYRSGAWDRDLGWRIDHIYLSEELLGCATGCVID 240 Query: 243 TKPRGWTKPSDHTPVIVSLDIPEPRKKQQDS 273 +PRG +PSDH PV+V+L P + +DS Sbjct: 241 KQPRGNVQPSDHAPVVVNLAWPPEEDEDEDS 271 >gi|119383680|ref|YP_914736.1| exodeoxyribonuclease III Xth [Paracoccus denitrificans PD1222] gi|119373447|gb|ABL69040.1| Exodeoxyribonuclease III [Paracoccus denitrificans PD1222] Length = 261 Score = 219 bits (557), Expect = 4e-55, Method: Composition-based stats. Identities = 118/261 (45%), Positives = 162/261 (62%), Gaps = 3/261 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+N+N +RARI L W+ E PD++ LQE K +D+ FP E + L Y+IET GQK Sbjct: 1 MKIATFNINGVRARIETLTGWLSEAQPDVVVLQEIKAQDEGFPREPIADLGYNIETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVAILSK ++ LPGD+ D QAR+IEAT + + +RI LYLP+GNP K Sbjct: 61 GFNGVAILSKLPLEDVSRGLPGDETDEQARYIEAT-VVGHRAVRIAGLYLPNGNPQPGPK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 +D K++W++R A L E P+ GDYN+IP+ D P W +DA F E R + Sbjct: 120 FDYKLAWMERLRARAKALLATEMPVAMMGDYNVIPESRDAAFPEKWLDDALFQPESRAAL 179 Query: 184 QKLQNMGFTDAIRATHD--THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +++ G+ DA+R H T ++FWDY A +W ++ GIRIDH++LSP+A LL I Sbjct: 180 RRILFDGWADAVRLRHPGSTRGPFTFWDYQAGAWQRDNGIRIDHVLLSPQAADLLIDVGI 239 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 D R KPSDH PV V LD Sbjct: 240 DRDERAKDKPSDHVPVWVDLD 260 >gi|84684871|ref|ZP_01012771.1| exodeoxyribonuclease III [Maritimibacter alkaliphilus HTCC2654] gi|84667206|gb|EAQ13676.1| exodeoxyribonuclease III [Rhodobacterales bacterium HTCC2654] Length = 267 Score = 219 bits (557), Expect = 4e-55, Method: Composition-based stats. Identities = 115/265 (43%), Positives = 167/265 (63%), Gaps = 7/265 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A++N+N I+AR+ + W+ E PD++ QE K+ D+NFP E + + Y++ET GQK Sbjct: 1 MKIASYNINGIKARLPAVTDWLTEAQPDVVIFQEIKSVDENFPREHFEDMGYNVETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDD-------LDVQARFIEATFTINTQTLRIGNLYLPHG 116 S+NGVAILSK ++ LPG + D QAR+IEAT + +RI LYLP+G Sbjct: 61 SFNGVAILSKRPLEDVTRGLPGAEGTGRDGEDDEQARYIEATVLGDRNAVRICGLYLPNG 120 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 NP+ K+ K+ W++R + A + L LE+P + AGDYN+IPQ D +P W +DA F Sbjct: 121 NPVGDEKFAYKLRWMERLEKRAKELLALEQPFLMAGDYNVIPQGIDALHPENWRDDALFQ 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 E R +F +LQN+G T+A RA + ++FWD+ +W +N GIRIDH +LSP+ LL Sbjct: 181 PESRGAFWRLQNLGLTEAFRARNQAAEQFTFWDFQRGAWQRNDGIRIDHFLLSPQCADLL 240 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSL 261 +ID + RG KPSDH P+ V L Sbjct: 241 EDCQIDKEVRGRDKPSDHVPIWVEL 265 >gi|222148978|ref|YP_002549935.1| exonuclease III [Agrobacterium vitis S4] gi|221735964|gb|ACM36927.1| exonuclease III [Agrobacterium vitis S4] Length = 264 Score = 219 bits (557), Expect = 5e-55, Method: Composition-based stats. Identities = 139/256 (54%), Positives = 183/256 (71%), Gaps = 1/256 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+N ++AR+ NL W++ ++PDI+CLQE K+ D+ FP +++L YH+ET GQK Sbjct: 1 MKIATWNINGVKARLANLCQWLESSSPDIVCLQEIKSVDEGFPRAEIEALGYHVETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP-ITST 122 +NGVA+LSK +P E+ LPGD+ D QARFIE F++ LR+ +LYLP+GNP Sbjct: 61 GFNGVALLSKIRPDEVNRGLPGDEADEQARFIEGVFSVADGVLRVCSLYLPNGNPSDDPV 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 KY K++W+ R RFA+ RL LEEPLI AGDYN+IP PHDC++P +W DA F + R + Sbjct: 121 KYPYKLAWMARLQRFAADRLALEEPLILAGDYNVIPHPHDCFDPAVWATDALFLPQTRAA 180 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 FQ L+N+G TDA+RAT D LYSFWDY A +W KN GIRIDH++LS EAT L S I+ Sbjct: 181 FQALENLGLTDAVRATTDATKLYSFWDYQAGAWQKNNGIRIDHLLLSAEATDRLVSTEIE 240 Query: 243 TKPRGWTKPSDHTPVI 258 R W KPSDH PVI Sbjct: 241 KHVRSWEKPSDHVPVI 256 >gi|257092446|ref|YP_003166087.1| exodeoxyribonuclease III Xth [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257044970|gb|ACV34158.1| exodeoxyribonuclease III Xth [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 255 Score = 218 bits (556), Expect = 5e-55, Method: Composition-based stats. Identities = 91/258 (35%), Positives = 137/258 (53%), Gaps = 5/258 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A+WNVNS++ R+ L W+ PDI+CLQETK ED FP + +++ YH+ GQK Sbjct: 1 MKIASWNVNSLKVRLPQLLDWLAAEQPDIVCLQETKLEDHAFPQQEVEAAGYHVAFSGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVA+L++ P ++V P + I + Y+P+G + S K Sbjct: 61 TYNGVALLARESPSDVVCGNPLHADQQKRLVAATIGGIC-----VVCAYVPNGQAVGSDK 115 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K++W+ R+ RL L+ AGD+NI P+ D YNP W + R +F Sbjct: 116 YAYKLAWLDALTRWLKGRLAANPRLVVAGDFNIAPEDRDVYNPAAWAGQILCSAPERAAF 175 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q+L ++G D+ R +S+WDY + KN+G+RIDHI+LS + A I+ Sbjct: 176 QRLLDLGLKDSFRLFEQPEKSFSWWDYRMLGFQKNQGLRIDHILLSEPLAGICTVAGINR 235 Query: 244 KPRGWTKPSDHTPVIVSL 261 R +PSDH PV L Sbjct: 236 HMRKLERPSDHAPVTAEL 253 >gi|108759762|ref|YP_633331.1| exodeoxyribonuclease III [Myxococcus xanthus DK 1622] gi|108463642|gb|ABF88827.1| exodeoxyribonuclease III [Myxococcus xanthus DK 1622] Length = 256 Score = 218 bits (556), Expect = 5e-55, Method: Composition-based stats. Identities = 102/258 (39%), Positives = 149/258 (57%), Gaps = 4/258 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+RAR L AW+K+ PD++CLQE K D +FP E ++ L YH GQK Sbjct: 1 MKIATWNVNSVRARQERLLAWLKKAQPDVLCLQELKCVDDDFPMEAVRELGYHAAVHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAIL+K +P ++V L D AR I AT +R+ + Y P+G + S + Sbjct: 61 TYNGVAILAKEEPKDVVKGLSDGVDDSHARLIAATVGG----IRVVSAYAPNGQSVDSPQ 116 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W R R+ R + +EPL+ GD+N+ P+ D Y+P +WE FTL+ R + Sbjct: 117 YQYKLEWYGRLRRYLDTRHKPDEPLVLGGDWNVAPEDIDTYDPKLWEGQTLFTLKERDAL 176 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q+L G +DA R H +++WDY + KN G+RIDH+ ++ L +D Sbjct: 177 QRLGAFGLSDAFRRLHPGVQKFTWWDYRMLGFPKNLGLRIDHLYVTAPVAERLTVVDVDR 236 Query: 244 KPRGWTKPSDHTPVIVSL 261 + R +PSDH PV + L Sbjct: 237 EERKGKQPSDHAPVWLEL 254 >gi|292490590|ref|YP_003526029.1| exodeoxyribonuclease III Xth [Nitrosococcus halophilus Nc4] gi|291579185|gb|ADE13642.1| exodeoxyribonuclease III Xth [Nitrosococcus halophilus Nc4] Length = 257 Score = 218 bits (556), Expect = 5e-55, Method: Composition-based stats. Identities = 92/261 (35%), Positives = 142/261 (54%), Gaps = 5/261 (1%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 M + +ATWNVNS+R R+ + W++ + PDI+ LQETK D FP E + Y Sbjct: 1 MPKLKIATWNVNSLRVRLPQVMDWLEAHQPDILALQETKLSDGEFPQEAFGDMGYRAAYS 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 GQK+YNGVAIL + +P +I+T LP + + I+ +R+ NLY+P+G+ + Sbjct: 61 GQKTYNGVAILCRQEPQDIMTDLPNLEDPQRRIL-----GISLGDIRLLNLYVPNGSEVG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 S KY K+ W+ R + + L LI GD+N+ P D +NP IW + R Sbjct: 116 SEKYAYKLDWLARVKDYLQEALAEYPKLIVLGDFNVAPGDGDVHNPEIWHETILCSTPER 175 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 ++ ++ ++GF D+ R +S+WDY ++ +N G+RID I++S E Sbjct: 176 EALGEILDLGFQDSFRLFEQEGQSFSWWDYRGGAFRRNWGLRIDLILISKELVPKCTECV 235 Query: 241 IDTKPRGWTKPSDHTPVIVSL 261 ID +PR +PSDH PVI + Sbjct: 236 IDKEPRRLKRPSDHAPVIATF 256 >gi|220923190|ref|YP_002498492.1| exodeoxyribonuclease III Xth [Methylobacterium nodulans ORS 2060] gi|219947797|gb|ACL58189.1| exodeoxyribonuclease III Xth [Methylobacterium nodulans ORS 2060] Length = 263 Score = 218 bits (556), Expect = 6e-55, Method: Composition-based stats. Identities = 126/262 (48%), Positives = 174/262 (66%), Gaps = 2/262 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + TWNVNS++ R+ +L A++KE +PD++CLQE K D+ FP ++ Y + T GQK Sbjct: 1 MRITTWNVNSVKQRLGHLLAFLKEASPDVVCLQELKCVDEAFPRTEIEEAGYVVATHGQK 60 Query: 64 SYNGVAILSKYQP--IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 ++NGVA+L++ ++ LPGD D QAR+IEA T TLR+ ++YLP+GNPI + Sbjct: 61 AFNGVALLTRQPLPLRDVRRGLPGDPEDGQARYIEAVIPTATATLRVASIYLPNGNPIGT 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 KYD K+++++R L A E EE L+ AGDYN+IP+P D NP W DA F E R Sbjct: 121 PKYDYKLAFLRRLLLHARALREKEEVLVLAGDYNVIPEPIDVANPEAWTGDALFLPESRA 180 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +F+ L N GFTDA+RA + LY+FWDY A +WS+N GIRIDH++LSP+A L SA + Sbjct: 181 AFRMLLNEGFTDALRACDERPGLYTFWDYQAGAWSRNLGIRIDHLLLSPQALDRLVSASV 240 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 RG KPSDH PV V LD+ Sbjct: 241 QKHLRGLDKPSDHVPVTVELDL 262 >gi|123968077|ref|YP_001008935.1| exodeoxyribonuclease III [Prochlorococcus marinus str. AS9601] gi|123198187|gb|ABM69828.1| exodeoxyribonuclease III [Prochlorococcus marinus str. AS9601] Length = 281 Score = 218 bits (556), Expect = 6e-55, Method: Composition-based stats. Identities = 97/266 (36%), Positives = 148/266 (55%), Gaps = 4/266 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSIR R+ + WI ++NPDI+CLQETK D NFP E + L Y +E GQK Sbjct: 1 MLIATWNVNSIRTRLSQILDWINKSNPDILCLQETKVVDDNFPIEAFEKLGYSVEIYGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT----INTQTLRIGNLYLPHGNPI 119 SYNGVAI+SK +P + G + Q I + ++I N+Y+P+G+ + Sbjct: 61 SYNGVAIISKIKPENVKKGFYGCNDTNQNIEIFLDQKRLISADINGIKIINVYVPNGSSL 120 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 S+K++ KI+W+ F + + + GD+N+ P D ++P +E + Sbjct: 121 DSSKFEYKINWLNCLASFLDDQEKKGALICLMGDFNVAPSNLDIHDPKKYEGGIMASEIE 180 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R + + D+ R +S+WDY +++ NKG RIDHI +S E +S L S Sbjct: 181 RSALNNVLKKRLIDSFRIYEQNTGHWSWWDYRNNAFELNKGWRIDHIYISKELSSKLKSC 240 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPE 265 ID+ PRG +PSDH PV++ L++ E Sbjct: 241 VIDSCPRGNLRPSDHAPVMIDLNLNE 266 >gi|114771793|ref|ZP_01449186.1| exodeoxyribonuclease III [alpha proteobacterium HTCC2255] gi|114547609|gb|EAU50500.1| exodeoxyribonuclease III [alpha proteobacterium HTCC2255] Length = 260 Score = 218 bits (556), Expect = 6e-55, Method: Composition-based stats. Identities = 122/260 (46%), Positives = 168/260 (64%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+N+N I+AR+ L W+ E PDI LQE K+ D+ FP E +++L Y I + G K Sbjct: 1 MKIATFNINGIKARLPALLDWLSETMPDIAMLQEIKSVDELFPREEIEALGYQIHSHGMK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVAILSKY +I+ LPGD D+Q R+IEAT N LR+ NLYLP+GNP K Sbjct: 61 GFNGVAILSKYPLEDIMRGLPGDSDDIQTRYIEATVITNKGPLRLCNLYLPNGNPTPGPK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 +D K+ W+KR ++LEEP + AGD+NIIPQ DC++ +WE+DA + E R ++ Sbjct: 121 FDYKLKWMKRLYERTCALIKLEEPFLLAGDFNIIPQAEDCWDTKVWESDAAYLPESRAAY 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +K+ N+G TDA R + + Y+FWDY A +W+KN GIRIDH +LS +L + D Sbjct: 181 RKILNLGLTDAFRVKNKSAMNYTFWDYQAGAWNKNNGIRIDHFLLSSSCADILIDCQSDR 240 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 + R KPSDH PV V LDI Sbjct: 241 ECRARDKPSDHVPVWVELDI 260 >gi|302383762|ref|YP_003819585.1| exodeoxyribonuclease III Xth [Brevundimonas subvibrioides ATCC 15264] gi|302194390|gb|ADL01962.1| exodeoxyribonuclease III Xth [Brevundimonas subvibrioides ATCC 15264] Length = 264 Score = 218 bits (555), Expect = 6e-55, Method: Composition-based stats. Identities = 107/262 (40%), Positives = 148/262 (56%), Gaps = 4/262 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ AR+ + W++ PD++C QE KT D FP E +SL Y++E GQK Sbjct: 1 MRIATWNVNSVNARLPTVLQWLEAAVPDVVCFQEIKTVDDKFPREAFESLGYNVEVHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN----TQTLRIGNLYLPHGNPI 119 SYNGVA+LSKY ++ LPG DL + +A + + +R+G LYLP+GNPI Sbjct: 61 SYNGVALLSKYPVSDVRRGLPGSDLLAEGEDDQARYIEALIEAPRPIRVGGLYLPNGNPI 120 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K+D K+ W+ R A L EE GDYN+IP P D P W DA F E Sbjct: 121 GTGKFDYKLRWMGRLNAHARDLLANEEAFTLCGDYNVIPTPDDAKTPSAWVTDALFQPES 180 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R +F+ L+ +G +A + Y+FWDY A +W ++ GIRID +LSP+A Sbjct: 181 RAAFRALKGLGLYEAGELGNQPPGTYTFWDYQAGAWQRDHGIRIDFHLLSPQAADRFVGV 240 Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261 R KPSDH PV++ L Sbjct: 241 ETHRDARDMDKPSDHVPVVIEL 262 >gi|89068210|ref|ZP_01155620.1| exodeoxyribonuclease III [Oceanicola granulosus HTCC2516] gi|89046127|gb|EAR52185.1| exodeoxyribonuclease III [Oceanicola granulosus HTCC2516] Length = 264 Score = 218 bits (555), Expect = 6e-55, Method: Composition-based stats. Identities = 123/260 (47%), Positives = 170/260 (65%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + +AT+N+N I+AR +L AW+ E +PD++ LQE K+ D+NFP E + Y++ T G Sbjct: 3 RSMKIATFNINGIKARHQSLLAWLDEADPDVVLLQEIKSIDENFPSELFEEKGYNVATHG 62 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 QK +NGVAILSK ++ LPGDD D AR+IEAT +R+ LYLP+GNP Sbjct: 63 QKGFNGVAILSKLPLEDVSRGLPGDDTDEHARWIEATVVGEHAAIRLCGLYLPNGNPAPG 122 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 KYD K++W++R A++ +E EEP I AGDYN+IPQP D P W DA F + R+ Sbjct: 123 PKYDYKLAWMERLHARAAELMEAEEPAIMAGDYNVIPQPEDAARPKAWVKDALFLPQTRR 182 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 ++++L N+GFT+A RA YSFWDY A +W KN GIRIDH++++P+A L+ I Sbjct: 183 AWRRLLNLGFTEAFRAKTLAAGHYSFWDYQAGAWQKNDGIRIDHVLMTPQAADLMRDVWI 242 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 D+ RG KPSDH PV+V L Sbjct: 243 DSAVRGRDKPSDHVPVVVDL 262 >gi|29828508|ref|NP_823142.1| exonuclease [Streptomyces avermitilis MA-4680] gi|29605612|dbj|BAC69677.1| putative exonuclease [Streptomyces avermitilis MA-4680] Length = 262 Score = 218 bits (555), Expect = 7e-55, Method: Composition-based stats. Identities = 78/262 (29%), Positives = 128/262 (48%), Gaps = 1/262 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSI AR+ L AW++ + D++C+QETKT + FP + L+ L Y Sbjct: 1 MRIATWNVNSITARLPRLLAWLESSGTDVLCIQETKTTAEQFPADALRELGYESAVHATG 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVA++S+ ++V LPGD + A +R+ ++Y+P+G + Sbjct: 61 RWNGVAVISRVGLEDVVRGLPGDPGFDGVQEPRALSATCGP-VRVWSVYVPNGREVEHPH 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W + + P GD+N+ P D Y+ +E T R + Sbjct: 120 YAYKLQWFEALKAAVAGDAAGSRPFAVMGDFNVAPTDDDVYDVAAFEGLTHVTPAERAAL 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 L+ G +D + H Y++WDY + KN+G+RID + + + A +D Sbjct: 180 ATLREAGLSDVVPRPLKYEHPYTYWDYRQLCFPKNRGMRIDLVYGNEPFAKAVKDAYVDR 239 Query: 244 KPRGWTKPSDHTPVIVSLDIPE 265 + R SDH PV+V LD+ + Sbjct: 240 EERKGKGASDHAPVVVDLDVQD 261 >gi|296135895|ref|YP_003643137.1| exodeoxyribonuclease III Xth [Thiomonas intermedia K12] gi|295796017|gb|ADG30807.1| exodeoxyribonuclease III Xth [Thiomonas intermedia K12] Length = 253 Score = 218 bits (555), Expect = 7e-55, Method: Composition-based stats. Identities = 88/256 (34%), Positives = 132/256 (51%), Gaps = 5/256 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ R+ + W++ +PD++ LQETK D+ FP L + YH GQ Sbjct: 1 MKIATWNVNSLSVRLPQVLDWLQAQSPDVLALQETKLTDERFPHAELLNAGYHSVCLGQP 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVA+LS+ + E+ +PG + LR+ Y P+G S K Sbjct: 61 TYNGVALLSRREAAEVQRGIPGFEDAQARVIAATFGD-----LRVIGAYFPNGQAPDSDK 115 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W+ + + L+ + GD+NI P+ D ++P+ W T E R F Sbjct: 116 FAYKMRWLDALQAWVATELQRHAKVALMGDFNIAPEDRDVFDPVAWAGQIHCTPEERGHF 175 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + L +G DA RA +S+WDY ++ KN+G+RIDHI++S L S ID Sbjct: 176 KALLGLGLIDAFRAFDQPPKSWSWWDYRNLAFRKNQGLRIDHILVSEGLRGSLQSCVIDK 235 Query: 244 KPRGWTKPSDHTPVIV 259 PR +PSDH PVI Sbjct: 236 APRKNERPSDHAPVIA 251 >gi|148550719|ref|YP_001260158.1| exodeoxyribonuclease III Xth [Sphingomonas wittichii RW1] gi|148503138|gb|ABQ71391.1| exodeoxyribonuclease III Xth [Sphingomonas wittichii RW1] Length = 269 Score = 218 bits (555), Expect = 7e-55, Method: Composition-based stats. Identities = 99/271 (36%), Positives = 150/271 (55%), Gaps = 4/271 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+NVN + R+ L W++E PD++ LQE K + FP ++ L Y + GQK Sbjct: 1 MKIATYNVNGVNGRLPVLLRWLEEAQPDVVVLQELKAPQEKFPESAIRDLGYDVIWHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 S+NGVA+LS+ I + IG LYLP+GNP K Sbjct: 61 SWNGVALLSRVGEIHETRRGL---PGDPDPGQSRYIEAAVNGILIGGLYLPNGNPRPGPK 117 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 +D K+ W R + A+ LE P++ AGD+N++P D Y P W +DA F EVR ++ Sbjct: 118 FDYKLRWFDRLIEHAAGLLESGLPVMLAGDFNVMPTDLDVYKPERWLDDALFAPEVRAAY 177 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +L + G+TDA+R H +Y+FWDY+ +++ +N G+RIDH++LSP L A++D Sbjct: 178 FRLLDQGWTDALRTLHPGEVIYTFWDYFRNAYGRNAGLRIDHLLLSPALADRLLDAQVDR 237 Query: 244 KPRGWTKPSDHTPVIVSLDIPEPRKKQQDST 274 RGW K SDH PV + L +P++K+ Sbjct: 238 HVRGWEKTSDHAPVWIELA-DKPKRKRAPKA 267 >gi|86138642|ref|ZP_01057215.1| exodeoxyribonuclease III [Roseobacter sp. MED193] gi|85824702|gb|EAQ44904.1| exodeoxyribonuclease III [Roseobacter sp. MED193] Length = 268 Score = 218 bits (555), Expect = 8e-55, Method: Composition-based stats. Identities = 125/269 (46%), Positives = 168/269 (62%), Gaps = 10/269 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A++N+N I+AR L W+ E PD++ LQE K+ D+ FP E + Y++ET GQK Sbjct: 1 MKIASFNINGIKARAAALPQWLDEAKPDVVVLQEIKSIDEAFPRELFEERGYNVETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI---- 119 +NGVAILSK ++ LPGD+ D+QAR+IEAT I Q LRI LYLP+GNP+ Sbjct: 61 GFNGVAILSKLPLEDVSRGLPGDEDDLQARWIEAT-VIGKQALRICGLYLPNGNPVELTD 119 Query: 120 -----TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 KY K++W++R A LE E P + AGDYNIIPQ D P W DA Sbjct: 120 EGSPVPGGKYAYKLAWMERLHARAQDLLESEMPALMAGDYNIIPQAEDAKRPEAWREDAL 179 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R ++Q++ N+GFT+A RA H YSFWDY A +W+++ GIRIDH +LSP+A Sbjct: 180 HRPESRAAYQRIVNLGFTEAFRARHQGPGHYSFWDYQAGAWNRDDGIRIDHFLLSPQAAD 239 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 LL +ID + RG KPSDH P+ V LD+ Sbjct: 240 LLQDCQIDKEIRGRDKPSDHVPIWVDLDL 268 >gi|99080738|ref|YP_612892.1| exodeoxyribonuclease III [Ruegeria sp. TM1040] gi|99037018|gb|ABF63630.1| Exodeoxyribonuclease III [Ruegeria sp. TM1040] Length = 268 Score = 218 bits (555), Expect = 8e-55, Method: Composition-based stats. Identities = 119/269 (44%), Positives = 165/269 (61%), Gaps = 10/269 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A++N+N I+AR++ L W+ E PD+ LQE K+ D+ FP E + Y++ET GQK Sbjct: 1 MKIASFNINGIKARVNALTDWLDEAQPDVAVLQEIKSVDEAFPRELFEERGYNVETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 S+NGVAILSK ++ LPGD+ D QAR+IEAT + Q LRI LYLP+GNP+ Sbjct: 61 SFNGVAILSKLPLEDVRRGLPGDESDEQARWIEAT-VVGKQALRICGLYLPNGNPVELND 119 Query: 124 ---------YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 Y K+ W++R A++ + E P + AGDYNIIPQ D P W DA Sbjct: 120 DGTPVEGGKYAYKLGWMERLKARAAELMAEEMPALMAGDYNIIPQAEDAKRPEAWREDAL 179 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R +FQ++ N+GFT+A R Y+FWDY A +W+++ GIRIDH +L+P+A Sbjct: 180 HRPESRAAFQRIVNLGFTEAFRTRTRGPGHYTFWDYQAGAWNRDDGIRIDHFLLTPQAAD 239 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 LL +ID RG KPSDH P+ V LD+ Sbjct: 240 LLRDCQIDKDIRGREKPSDHVPIWVDLDL 268 >gi|294340117|emb|CAZ88488.1| putative exodeoxyribonuclease III [Thiomonas sp. 3As] Length = 253 Score = 218 bits (554), Expect = 8e-55, Method: Composition-based stats. Identities = 88/256 (34%), Positives = 131/256 (51%), Gaps = 5/256 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ R+ + W++ +PD++ LQETK D FP L + YH GQ Sbjct: 1 MKIATWNVNSLSVRLPQVLDWLQAQSPDVLALQETKLTDDRFPHAELLNAGYHSVCLGQP 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVA+LS+ + E+ +PG + LR+ Y P+G S K Sbjct: 61 TYNGVALLSRREAAEVQRGIPGFEDAQARVIAATFGD-----LRVIGAYFPNGQAPDSDK 115 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W+ + + L+ + GD+NI P+ D ++P+ W T E R F Sbjct: 116 FAYKMRWLDALQAWVAAELQRYAKVALMGDFNIAPEDRDVFDPVAWAGQIHCTPEERGHF 175 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + L +G DA RA +S+WDY ++ KN+G+RIDHI++S L S ID Sbjct: 176 KALLGLGLIDAFRAFDQPPKSWSWWDYRNLAFRKNQGLRIDHILVSEGLRDSLQSCVIDK 235 Query: 244 KPRGWTKPSDHTPVIV 259 PR +PSDH PVI Sbjct: 236 APRKNERPSDHAPVIA 251 >gi|300022777|ref|YP_003755388.1| exodeoxyribonuclease III [Hyphomicrobium denitrificans ATCC 51888] gi|299524598|gb|ADJ23067.1| exodeoxyribonuclease III [Hyphomicrobium denitrificans ATCC 51888] Length = 260 Score = 218 bits (554), Expect = 9e-55, Method: Composition-based stats. Identities = 117/258 (45%), Positives = 167/258 (64%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+N ++AR+ + ++++ +PD+IC QE K+ D FP Q + Y++ T GQK Sbjct: 1 MILATWNINGVKARLESALTYLRQQSPDVICFQEIKSVDDGFPTSAFQDIGYNVATNGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVAILSK ++V LPGDD D AR+IEA+ + + +R+ +LYLP+GNPI + K Sbjct: 61 GFNGVAILSKSPLEDVVRGLPGDDADQHARWIEASVPLGDRMVRVVSLYLPNGNPIGTEK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K++W+ R A Q + E PL+ AGD+N+IP+ D P W NDA F E R ++ Sbjct: 121 FSYKLAWMARMRLRAKQLQQDEMPLVLAGDFNVIPESVDAKRPAAWVNDALFQPESRAAW 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + L N GFTDA RA H +Y+FWDY A ++ K+ GIRIDHI+LS +A LL ++ ID Sbjct: 181 RTLVNEGFTDATRACHPGPGVYTFWDYQAGAFQKDDGIRIDHILLSSQAADLLVASGIDR 240 Query: 244 KPRGWTKPSDHTPVIVSL 261 R KPSDH PV V L Sbjct: 241 ATRAQEKPSDHVPVWVKL 258 >gi|296446338|ref|ZP_06888283.1| exodeoxyribonuclease III Xth [Methylosinus trichosporium OB3b] gi|296256111|gb|EFH03193.1| exodeoxyribonuclease III Xth [Methylosinus trichosporium OB3b] Length = 258 Score = 218 bits (554), Expect = 9e-55, Method: Composition-based stats. Identities = 124/259 (47%), Positives = 174/259 (67%), Gaps = 1/259 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+R R+ L A+++E PD++CLQE K ED FP ++ L Y++ET GQK Sbjct: 1 MRIATWNVNSVRQRLEQLTAYLREVAPDVLCLQEIKCEDAAFPRLEIEELGYNVETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 ++NGVAILSK IE+V LP + D QAR+IEA + + LR+ ++YLP+GNP + K Sbjct: 61 TFNGVAILSKTP-IEVVRGLPKFEHDPQARYIEAVVSTDRGALRVASIYLPNGNPPETEK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K++++ + A+ L LEEP++ AGDYN+IP D ++P W DA F + R F Sbjct: 120 YAYKLAFMDCLIAHAASLLALEEPVVLAGDYNVIPAARDVHDPAAWAGDALFLPQTRAKF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q+L N+G+T+A+RAT D LY+FWDY A +W +NKGIRIDH++LSP+A L S ID Sbjct: 180 QELTNLGYTEALRATTDAAGLYTFWDYQAGAWQRNKGIRIDHLLLSPQAADRLQSVTIDK 239 Query: 244 KPRGWTKPSDHTPVIVSLD 262 R KPSDH P+ L+ Sbjct: 240 NLRAGAKPSDHVPIRCELE 258 >gi|319948313|ref|ZP_08022460.1| exodeoxyribonuclease III [Dietzia cinnamea P4] gi|319438033|gb|EFV93006.1| exodeoxyribonuclease III [Dietzia cinnamea P4] Length = 266 Score = 218 bits (554), Expect = 1e-54, Method: Composition-based stats. Identities = 77/266 (28%), Positives = 128/266 (48%), Gaps = 7/266 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSIRAR + AW+ ++ D++ +QETK +D+ FP E + L Y + G Sbjct: 1 MRLATWNVNSIRARKDRVLAWLDRSDVDVLAMQETKCKDEQFPEEDFRELGYEVAHHGLS 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-----TQTLRIGNLYLPHGNP 118 +NGVA+ S+ ++ G + +R+ +LY+P+G Sbjct: 61 QWNGVAVASRVGLEDVRLGFDGMPGFHKDPEQSQDPEARAISAVCDGVRVYSLYVPNGRE 120 Query: 119 ITSTKYDDKISWIKRFLRFASQRL--ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 ++ Y K+ W+ R A+ L + + + GD+N+ P D ++ ++E + Sbjct: 121 LSDPHYTYKLEWLARLRDHAAAELVADPDAQVALVGDWNVAPLDEDVWDMEVFEGKTHVS 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 R + GF + R +Y++WDY S+ K KG+RID + SP + + Sbjct: 181 GPERLAVAAFDGAGFREVTREYTPGPGVYTYWDYTGLSFPKRKGMRIDFQLHSPALAARV 240 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLD 262 A ID + R SDH PV+V LD Sbjct: 241 TGAFIDREERKGKGASDHAPVVVELD 266 >gi|238063778|ref|ZP_04608487.1| exodeoxyribonuclease III Xth [Micromonospora sp. ATCC 39149] gi|237885589|gb|EEP74417.1| exodeoxyribonuclease III Xth [Micromonospora sp. ATCC 39149] Length = 271 Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats. Identities = 80/260 (30%), Positives = 129/260 (49%), Gaps = 2/260 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS++AR+ L W+ PD++CLQETK D FP + L Y + + Sbjct: 7 MRLATWNVNSVKARLPRLLDWLATTGPDVVCLQETKCPDGAFPVAEVGELGYTVASHSDG 66 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVAILS+ ++ PG+ + + T LR+ ++Y+P+G Sbjct: 67 RWNGVAILSRAGLADVTVGFPGEPGFPEPEARAISATCAG--LRVWSVYVPNGRAPGDPH 124 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K++W Q L PL GD+N+ P D ++P ++ T R + Sbjct: 125 YAYKLAWFAALRDALEQELTGGLPLAVCGDFNVAPTDADVWDPALFATSTHVTPAERDAL 184 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 L+++ +D + H Y++WDY A + +NKG+RID + S + +A +D Sbjct: 185 AALRDLELSDVVPTPMKGPHPYTYWDYRAGMFHQNKGMRIDLVYASAPFARAVRAAYVDR 244 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 + R PSDH PV+V D+ Sbjct: 245 EARKGKAPSDHAPVVVDADL 264 >gi|115375620|ref|ZP_01462877.1| exodeoxyribonuclease III [Stigmatella aurantiaca DW4/3-1] gi|115367396|gb|EAU66374.1| exodeoxyribonuclease III [Stigmatella aurantiaca DW4/3-1] Length = 263 Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats. Identities = 103/259 (39%), Positives = 146/259 (56%), Gaps = 5/259 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A+WNVNS+RAR L W+K + PD++CLQE K D +FP E ++ YH T GQK Sbjct: 7 MKIASWNVNSVRARQERLLNWLKAHQPDVLCLQELKCVDADFPTEAVREAGYHAVTHGQK 66 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAILSK +P ++V L D AR I AT + +R+ + Y+P+G + S Sbjct: 67 TYNGVAILSKAEPSDVVLGLSDGVEDSHARLIAATVSG----VRVVSAYVPNGQAVDSPA 122 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W R R+ R ++PL+ GD+N+ P+P D Y+P +WE FTL+ R + Sbjct: 123 YVYKLEWYSRLRRYLEARHTPDQPLVLCGDWNVAPEPIDVYDPAVWEGQTLFTLKERDAL 182 Query: 184 QKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 Q++ G D R H +S+WDY S+ KN G+RIDHI + L A ID Sbjct: 183 QQVCAFGLADTFRKLHPGVEKKFSWWDYRGLSFPKNLGVRIDHIFATAPLVQRLVKAEID 242 Query: 243 TKPRGWTKPSDHTPVIVSL 261 + R +PSDH PV Sbjct: 243 REERKGKQPSDHAPVWAEF 261 >gi|325293099|ref|YP_004278963.1| exodeoxyribonuclease III [Agrobacterium sp. H13-3] gi|325060952|gb|ADY64643.1| exodeoxyribonuclease III [Agrobacterium sp. H13-3] Length = 265 Score = 217 bits (553), Expect = 1e-54, Method: Composition-based stats. Identities = 141/255 (55%), Positives = 184/255 (72%), Gaps = 1/255 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+N ++ARI NL W+K+++PDI+CLQE K+ D+ FP L++L YH+ET GQK Sbjct: 1 MKIATWNINGVKARIENLCQWLKDSSPDIVCLQEIKSVDEGFPRLELEALGYHVETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122 +NGVA+LSK +P EI LPGDD D QARFIE F+++ +R+ +LYLP+GNP Sbjct: 61 GFNGVALLSKMKPDEINHGLPGDDADEQARFIEGVFSVDGGAIRVCSLYLPNGNPPDDPV 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 KY K++W++R RFA RL LEEPLI AGDYN+IP+P DC++P +W DA F + R + Sbjct: 121 KYPYKLAWMERLRRFAEDRLALEEPLILAGDYNVIPEPFDCHDPRVWAGDALFLPKTRSA 180 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F++L+N+GFTDA RAT D LYSFWDY A +W KN GIRIDH+MLS EA L S I+ Sbjct: 181 FRRLENLGFTDAARATTDEPGLYSFWDYQAGAWPKNNGIRIDHLMLSAEAADRLESVSIE 240 Query: 243 TKPRGWTKPSDHTPV 257 R W KPSDH PV Sbjct: 241 KHVRAWEKPSDHVPV 255 >gi|326386341|ref|ZP_08207964.1| exodeoxyribonuclease III [Novosphingobium nitrogenifigens DSM 19370] gi|326209002|gb|EGD59796.1| exodeoxyribonuclease III [Novosphingobium nitrogenifigens DSM 19370] Length = 267 Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 102/261 (39%), Positives = 156/261 (59%), Gaps = 5/261 (1%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 S + VA++N+N I+AR+ L W++E PDI CLQE KT+D+ FP ++ Y G Sbjct: 7 SSIKVASFNINGIKARLPRLIEWLEETQPDIACLQEIKTQDEGFPAADFAAIGYEAIWHG 66 Query: 62 QKSYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 QK +NGVAIL++ +P+E+ L G+ D +R++EA LR+ +YLP+GNP Sbjct: 67 QKGFNGVAILARGERPVEVQRGLAGEPEDEHSRYLEADV----MGLRVVCIYLPNGNPQP 122 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 K+D K+ W++R +Q E P + GDYN+IP+ +D ++ +DA E R Sbjct: 123 GPKFDYKLRWMERLKTRMAQIAAEEVPALVIGDYNVIPRDNDIWSTRAMADDALMQPESR 182 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 ++++L + G+TDA+ + +Y+FWDY A +W ++ G RIDH +LSPE L +A Sbjct: 183 AAYRRLLHAGWTDALGLLNPRGGVYTFWDYQAGAWQRDHGFRIDHALLSPELADRLVAAG 242 Query: 241 IDTKPRGWTKPSDHTPVIVSL 261 +D RG K SDH PV VS+ Sbjct: 243 VDKTYRGREKASDHAPVWVSI 263 >gi|254460874|ref|ZP_05074290.1| exodeoxyribonuclease III [Rhodobacterales bacterium HTCC2083] gi|206677463|gb|EDZ41950.1| exodeoxyribonuclease III [Rhodobacteraceae bacterium HTCC2083] Length = 259 Score = 217 bits (552), Expect = 2e-54, Method: Composition-based stats. Identities = 122/258 (47%), Positives = 163/258 (63%), Gaps = 1/258 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+N+N I+ARI L W+K+ PD+ LQE K+ D+ FP E + + Y++ET GQK Sbjct: 1 MKIATFNINGIKARIAALPEWLKDAQPDVALLQEIKSVDEGFPRELFEDMGYNVETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 S+NGVAILSK ++ LPGDD D QAR+IEAT + Q +R+ LYLP+GNP K Sbjct: 61 SFNGVAILSKLPLEDVRRGLPGDDSDEQARWIEAT-VVGKQAIRVCGLYLPNGNPAPGPK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 YD K++W+ R A L E P + AGDYNIIPQ D +P +W+ DA E R ++ Sbjct: 120 YDYKLAWMARLQARAEALLAEETPFLMAGDYNIIPQDEDARHPEVWQEDALARPESRAAY 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 ++L N+G T+A RA YSFWDY A +W+K+ GIRIDH +LSP +L +ID Sbjct: 180 RRLVNLGLTEAFRARVHGPEHYSFWDYQAGAWNKDDGIRIDHFLLSPAVADILVDCQIDM 239 Query: 244 KPRGWTKPSDHTPVIVSL 261 R KPSDH PV V L Sbjct: 240 HVRAGEKPSDHVPVWVEL 257 >gi|159044435|ref|YP_001533229.1| putative Exodeoxyribonuclease III [Dinoroseobacter shibae DFL 12] gi|157912195|gb|ABV93628.1| putative Exodeoxyribonuclease III [Dinoroseobacter shibae DFL 12] Length = 259 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 122/258 (47%), Positives = 163/258 (63%), Gaps = 1/258 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+N+N I+ARI+ L W++E +PD++ LQE K+ D FP E + + Y +ET GQK Sbjct: 1 MQIATFNINGIKARINALPDWLREASPDVVVLQEIKSVDAAFPRELFEDMGYTVETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 S+NGVAILSK ++ LPGDD D QAR+IEAT +R+ LYLP+GNP K Sbjct: 61 SFNGVAILSKLPLEDVTRGLPGDDGDEQARWIEATVMG-DVPVRVCGLYLPNGNPAPGPK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 YD K++W+ R A++ L EEP + AGDYNIIP D P W DA R +F Sbjct: 120 YDYKLAWMARLKTRAAELLAAEEPALMAGDYNIIPLDEDAARPEAWRKDALALPASRAAF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +++ N+GFTDA R YSFWDY A +W +N GIRIDHI+++P+ L+ RID Sbjct: 180 REILNLGFTDAFRTRVPGPGHYSFWDYQAGAWQRNDGIRIDHILMTPDCADLMRDCRIDA 239 Query: 244 KPRGWTKPSDHTPVIVSL 261 RG KPSDH PV+V L Sbjct: 240 AVRGGEKPSDHVPVVVDL 257 >gi|209964343|ref|YP_002297258.1| exodeoxyribonuclease III [Rhodospirillum centenum SW] gi|209957809|gb|ACI98445.1| exodeoxyribonuclease III [Rhodospirillum centenum SW] Length = 257 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 118/259 (45%), Positives = 163/259 (62%), Gaps = 5/259 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS++AR+ N+ +W+ PD++ LQE K E +FP + L Y + GQK Sbjct: 1 MKIATWNVNSVKARLPNVLSWLNAAAPDVVLLQEIKCETASFPALEFEPLGYRVHAVGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 SYNGVAILS+ +++ LPG+ DVQAR++E T LRI +LYLP+GNP+ S K Sbjct: 61 SYNGVAILSRLPVEDLIERLPGEPEDVQARYVEGTIGG----LRIASLYLPNGNPVGSEK 116 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W++R + L E P + GDYN+IP P D Y+P W DA F E R+ F Sbjct: 117 YPYKLRWMERLKAHVGELLAREVPFVLGGDYNVIPAPEDVYDPEGWSGDALFRRETREKF 176 Query: 184 QKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 +++ N+G T+A RA H H Y+FWDY A +W ++ G+RIDH +LSP+A L ID Sbjct: 177 REILNLGLTEAFRALHPAARHAYTFWDYQAGAWPRDLGLRIDHFLLSPQAADRLAGCTID 236 Query: 243 TKPRGWTKPSDHTPVIVSL 261 PRG K SDHTPV++ L Sbjct: 237 RSPRGQEKASDHTPVLLDL 255 >gi|46201885|ref|ZP_00208288.1| COG0708: Exonuclease III [Magnetospirillum magnetotacticum MS-1] Length = 258 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 116/259 (44%), Positives = 159/259 (61%), Gaps = 5/259 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+RAR+ N+ W+ PD++ LQE K +D +FP +++ Y GQK Sbjct: 3 LRIATWNVNSVRARLGNVLDWLGSFAPDVVLLQEIKCQDHDFPRLEIEAAGYQTAVHGQK 62 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 SYNGVAILS++ +I LPGD+ D QAR+IEAT R+ +LYLP+GNP K Sbjct: 63 SYNGVAILSRHAMSDISLRLPGDESDEQARYIEATIEGW----RLASLYLPNGNPAPGDK 118 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 YD K++W+ R A L + P + GD+NI P D Y+P W+NDA + R +F Sbjct: 119 YDYKLAWMARLRAHAQSLLTQDIPFVLGGDFNICPTDDDVYDPPNWQNDALCRPDSRAAF 178 Query: 184 QKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 + + N+G T+A RA H YSFWDY A +W +++G+RIDH +LSP A L + ID Sbjct: 179 RAIVNLGLTEAFRALHPEEKGRYSFWDYQAGAWQRDEGLRIDHFLLSPRAADHLQACDID 238 Query: 243 TKPRGWTKPSDHTPVIVSL 261 PRG K SDHTPV + L Sbjct: 239 RAPRGKEKASDHTPVWIEL 257 >gi|317404954|gb|EFV85317.1| exodeoxyribonuclease III [Achromobacter xylosoxidans C54] Length = 260 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 89/258 (34%), Positives = 134/258 (51%), Gaps = 1/258 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ R+ + W+ N D++C+QE K D FP + YH GQK Sbjct: 1 MKLATWNVNSLNVRLPQVLDWLAANPVDVLCIQELKLTDDKFPEAAFKEAGYHAVWAGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAI+S+ +V +LP D Q R + TF +R+ Y P+G + S K Sbjct: 61 TYNGVAIVSRVPGTSMVRNLP-TYEDPQQRVLALTFPSADGDVRVVCAYCPNGQSVGSDK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W + + ++ L GDYN+ P D +NP WE + RQ+ Sbjct: 120 YAYKLEWFAAMRAWLADEIKQYPRLAVLGDYNVAPADEDVHNPEKWEGQVLVSEPERQAL 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + L ++G D+ R +S+WDY ++ +N G+RIDHI+LSP + ID Sbjct: 180 RDLIDLGLADSFRLFEQPEKSFSWWDYRQFAFRRNAGLRIDHILLSPPLVKRCTACVIDK 239 Query: 244 KPRGWTKPSDHTPVIVSL 261 +PR +PSDH PV+ +L Sbjct: 240 EPRRNEQPSDHAPVVATL 257 >gi|15889021|ref|NP_354702.1| exonuclease III [Agrobacterium tumefaciens str. C58] gi|15156812|gb|AAK87487.1| exonuclease III [Agrobacterium tumefaciens str. C58] Length = 265 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 141/255 (55%), Positives = 184/255 (72%), Gaps = 1/255 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+N ++ARI NL W+K+++PDI+CLQE K+ D+ FP +++L YHIET GQK Sbjct: 1 MKIATWNINGVKARIENLCQWLKDSSPDIVCLQEIKSVDEGFPRLEIEALGYHIETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122 +NGVA+LSK +P E+ LPGDD D QARFIE F++ +R+ +LYLP+GNP Sbjct: 61 GFNGVALLSKVKPDEVNRGLPGDDADEQARFIEGVFSVEGGAIRVCSLYLPNGNPPDDPV 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 KY K++W++R RFA RL +EEPLI AGDYN+IP+P DC++P +WE DA F + R + Sbjct: 121 KYPYKLAWMERLRRFAEDRLAMEEPLILAGDYNVIPEPFDCHDPRVWEGDALFLPKTRAA 180 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F+KL+N+GFTDA RAT D LYSFWDY A +W KN GIRIDH+MLS EA L S I+ Sbjct: 181 FRKLENLGFTDAARATTDAAGLYSFWDYQAGAWPKNNGIRIDHLMLSAEAADRLQSVEIE 240 Query: 243 TKPRGWTKPSDHTPV 257 R W KPSDH PV Sbjct: 241 KHVRAWEKPSDHVPV 255 >gi|254437353|ref|ZP_05050847.1| exodeoxyribonuclease III [Octadecabacter antarcticus 307] gi|198252799|gb|EDY77113.1| exodeoxyribonuclease III [Octadecabacter antarcticus 307] Length = 266 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 119/265 (44%), Positives = 158/265 (59%), Gaps = 6/265 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+N+N ++ARI L W++ + PD+ LQE K+ D+ FP E ++L Y +ET GQK Sbjct: 1 MKIATFNINGVKARIGALTDWLEASKPDVALLQEIKSVDEGFPREHFENLGYRVETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT------FTINTQTLRIGNLYLPHGN 117 +NGVAILSK +I LP + + I + +RI LYLP+GN Sbjct: 61 GFNGVAILSKLPLEDISRGLPDAAGAGREGVDDIEARYIEATVIGEKAIRICGLYLPNGN 120 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 P KYD K+ W+ R A Q + LEEP + AGDYNIIPQP D P +W +DA F Sbjct: 121 PAPGPKYDYKLRWMDRLKTRAQQLMALEEPFLMAGDYNIIPQPEDAARPNVWTDDALFRP 180 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 + R +F++L N+G T+A RA H YSFWDY A +W KN GIRIDH +LS + LL Sbjct: 181 DSRAAFRRLLNLGLTEAFRACHQGSGHYSFWDYQAGAWDKNDGIRIDHFLLSNQCADLLK 240 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLD 262 A I++ RG KPSDH PV V LD Sbjct: 241 DAWIESGVRGREKPSDHVPVWVELD 265 >gi|296284849|ref|ZP_06862847.1| hypothetical protein CbatJ_14571 [Citromicrobium bathyomarinum JL354] Length = 257 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 92/258 (35%), Positives = 142/258 (55%), Gaps = 2/258 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+N+N I+AR+ L W++E PD+ CLQE K++D FP +++ Y GQK Sbjct: 1 MRIATFNINGIKARLPRLLEWLEETQPDVACLQEIKSQDDGFPASEFEAIGYQALWHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 S+NGVA+L+K + + ++ + I NLYLP+GNP K Sbjct: 61 SFNGVAVLAKQGLTMEERQRGLPGDESDDQARYLEVEVDG--VVIANLYLPNGNPHPGPK 118 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 +D K++W++R + E+P I GD+N+IPQ D ++P +DA E R ++ Sbjct: 119 FDYKLAWMERLRARMAALWAQEKPTIVLGDFNVIPQDKDVWSPPAMADDALMQPESRDAY 178 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +L G+TDAI + +++FWDY +W ++ G RIDH +LSPE L +A +D Sbjct: 179 ARLLADGWTDAIDTLNPRGGVWTFWDYQRGAWQRDHGFRIDHCLLSPELADRLQAAGVDK 238 Query: 244 KPRGWTKPSDHTPVIVSL 261 RG K SDH PV V + Sbjct: 239 HARGREKASDHAPVWVEI 256 >gi|84497619|ref|ZP_00996441.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Janibacter sp. HTCC2649] gi|84382507|gb|EAP98389.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Janibacter sp. HTCC2649] Length = 262 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 75/261 (28%), Positives = 135/261 (51%), Gaps = 1/261 (0%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 +V +ATWNVNSIR+RI + AW++ + D++ +QETK ++ FPF+ ++L Y + G Sbjct: 1 MVRIATWNVNSIRSRIDRVEAWLERTDVDVLAIQETKCREEQFPFDRFEALGYAVAHHGL 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT-LRIGNLYLPHGNPITS 121 +NGVAI S+ ++ P + EA T +R+ +LY+P+G + Sbjct: 61 SQWNGVAIASRVGLDDVSRGFPDVPHWGEPAVAEARAIGATCNGIRLWSLYVPNGRALED 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 K++W+++ + +P GD+NI PQ D ++ + + + + R Sbjct: 121 PHMHYKLAWLEQLRVQTAAWAAEGQPFALMGDWNIAPQDEDVWSMDYYLDKSHVSPPERA 180 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +FQ + + G +D +R +++WDY ++ K +G+RID I+ S + A I Sbjct: 181 AFQAVLDAGVSDVVRPHTPEPGTFTYWDYQRLAFQKRRGMRIDFILASDPLAQRVRGAAI 240 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 D + R SDH PV++ ++ Sbjct: 241 DREERKGKGASDHAPVVIEVE 261 >gi|209523548|ref|ZP_03272102.1| exodeoxyribonuclease III [Arthrospira maxima CS-328] gi|209495953|gb|EDZ96254.1| exodeoxyribonuclease III [Arthrospira maxima CS-328] Length = 263 Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats. Identities = 94/261 (36%), Positives = 140/261 (53%), Gaps = 3/261 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSIR R + +W++ + D++CLQETK D++FP + L YH+ GQK Sbjct: 1 MKIATWNVNSIRTRQDQVLSWLQGQDIDVLCLQETKVIDQDFPRSPFEELGYHVYIYGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLP---GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +YNGVAI S+ ++ G D + + + I N+Y+P+G+ + Sbjct: 61 AYNGVAIFSRLNIESVIMGFTPILGADQVGELDDQKRVIAGVIDDICIVNVYIPNGSSVG 120 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 S KY+ K+ W+ R + Q L L GD+NI P+ D YNP EN + R Sbjct: 121 SDKYEYKLQWLNRLGDYLQQMLIKYPHLCICGDFNIAPEDRDIYNPQNRENHIMASAAER 180 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 Q+ + N+G D R +++WDY A S+++N+G RIDH LSP + Sbjct: 181 QALDAIANLGLADGFRKFTQDGGHFTWWDYRAASFTRNRGWRIDHHYLSPGLYQNAIACY 240 Query: 241 IDTKPRGWTKPSDHTPVIVSL 261 IDT+PR KPSDH PVI+ + Sbjct: 241 IDTEPRTQPKPSDHAPVILEI 261 >gi|83858693|ref|ZP_00952215.1| hypothetical protein OA2633_04301 [Oceanicaulis alexandrii HTCC2633] gi|83853516|gb|EAP91368.1| hypothetical protein OA2633_04301 [Oceanicaulis alexandrii HTCC2633] Length = 263 Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats. Identities = 122/262 (46%), Positives = 169/262 (64%), Gaps = 1/262 (0%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 ++VA+WNVNSI+AR+ N+ W+KE +PD+ CLQE KT D+ FP ++ L Y++ET GQ Sbjct: 2 TLSVASWNVNSIKARLPNVLDWLKEASPDVACLQEIKTVDEGFPRLEIEELGYNVETVGQ 61 Query: 63 KSYNGVAILSKYQPIEI-VTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 K+YNGVA+LSK EI LPGDD D QAR+IEA + ++ +R+ ++YLP+GNP Sbjct: 62 KTYNGVALLSKRPIEEISQRALPGDDEDDQARYIEAVISADSGPVRVASIYLPNGNPAPG 121 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 KYD K++W+KR A L EEP+I AGDYN+IP+ D ++ WE DA E R Sbjct: 122 PKYDYKLAWMKRLKAHARSLLAFEEPVILAGDYNLIPRDSDVHDAAAWEGDALIRPESRD 181 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +F K+ +G+++A H Y+FWDY A +W KN GIRIDH++LSP+A L + I Sbjct: 182 AFAKILWLGYSEAFMQADGRAHQYTFWDYQAGAWQKNNGIRIDHLLLSPQAADRLKAVEI 241 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 RG K SDH P + D+ Sbjct: 242 AKDVRGKEKASDHVPFVGVFDL 263 >gi|318042025|ref|ZP_07973981.1| exodeoxyribonuclease III [Synechococcus sp. CB0101] Length = 276 Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats. Identities = 91/273 (33%), Positives = 143/273 (52%), Gaps = 4/273 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A+WNVNS+R R+ + AW++ PD++CLQETK D+ FP + + YH GQK Sbjct: 1 MRIASWNVNSVRTRLDQVLAWLETEQPDVLCLQETKVADQLFPSAAFEQMGYHCAISGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHL----PGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +YNGVA++S+ ++ P D + + + +R+ NLY+P+G+ + Sbjct: 61 AYNGVALISRLPLDDVQIGFSALLPDDPDAPELSEQKRVISALVDGVRVLNLYVPNGSSL 120 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 +S KY K++W+ R+ + + + +PL GD+NI P+ D ++P T Sbjct: 121 SSDKYTYKLAWLACLKRYLAVQHDQGDPLCMVGDFNIGPEARDLHDPDRLSGGIMATDAE 180 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 RQ+ TD R +S+WDY + +W +++G RIDHI LS E Sbjct: 181 RQALSDALAGRLTDVFRVFEPGSGHWSWWDYRSGAWDRDQGWRIDHIYLSEELLDCATGC 240 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQD 272 ID PRG T+PSDH PV+V+L E D Sbjct: 241 VIDKTPRGNTQPSDHAPVVVNLAWDEETDASDD 273 >gi|289207194|ref|YP_003459260.1| exodeoxyribonuclease III Xth [Thioalkalivibrio sp. K90mix] gi|288942825|gb|ADC70524.1| exodeoxyribonuclease III Xth [Thioalkalivibrio sp. K90mix] Length = 255 Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats. Identities = 88/258 (34%), Positives = 137/258 (53%), Gaps = 5/258 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A+WNVNS++ R+ + W+ + DI+ LQETK D+NFP + Y + GQK Sbjct: 1 MKIASWNVNSLKVRLPQVLDWLGSSRTDILALQETKLTDENFPVSAIHEAGYEVVYSGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAILS+ Q ++VT PG +R+ NLY+ +G + + K Sbjct: 61 TYNGVAILSRTQATDVVTDPPG-----LEDAQRRILAATIGDIRVVNLYVVNGENVGTEK 115 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W+ R + + +E L+ GD+NI P+ D ++P W + R++ Sbjct: 116 YAYKLDWLARMRSWLAAEIEAHPKLVVLGDFNIAPEDRDVHDPEAWHERILCSTPEREAL 175 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 L +G D RA +S++DY A S+ +N+G+RID ++ SP L +A ID Sbjct: 176 AALTELGLADTFRAFEQPEEEFSWFDYRAASFRRNRGLRIDLVLASPALLKRLTAAGIDR 235 Query: 244 KPRGWTKPSDHTPVIVSL 261 +PRGW +PSDH PV Sbjct: 236 EPRGWERPSDHAPVWAEF 253 >gi|293604886|ref|ZP_06687283.1| exodeoxyribonuclease III [Achromobacter piechaudii ATCC 43553] gi|292816714|gb|EFF75798.1| exodeoxyribonuclease III [Achromobacter piechaudii ATCC 43553] Length = 260 Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats. Identities = 88/259 (33%), Positives = 140/259 (54%), Gaps = 1/259 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ R+ + W+ N D++C+QE K D FP + YH GQK Sbjct: 1 MKLATWNVNSLNVRLPQVLDWLAANPVDVLCIQELKLTDDKFPEAAFKEAGYHAVWAGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAI+S+ ++V ++PG D D Q R + TF +R+ Y P+G + S K Sbjct: 61 TYNGVAIVSRMPGTKMVRNIPGHD-DHQQRVLALTFPSPEGDVRVVCAYCPNGQSLDSEK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K++W + + ++ ++ L GDYN+ P D +NP WE + R + Sbjct: 120 YQYKLAWFEAMREWLAEEIKQYPRLAVLGDYNVAPADEDVHNPEKWEGHVLVSEPERAAL 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + L ++G TD+ R +S+WDY ++ +N G+RIDH++LS + ID Sbjct: 180 RALLDLGLTDSFRLFEQPEKSFSWWDYRQFAFRRNAGLRIDHVLLSAPLVKRCVACVIDK 239 Query: 244 KPRGWTKPSDHTPVIVSLD 262 +PR +PSDH PV+ +L+ Sbjct: 240 EPRRNEQPSDHAPVVATLE 258 >gi|162456399|ref|YP_001618766.1| exodeoxyribonuclease III [Sorangium cellulosum 'So ce 56'] gi|161166981|emb|CAN98286.1| exodeoxyribonuclease III [Sorangium cellulosum 'So ce 56'] Length = 269 Score = 216 bits (550), Expect = 3e-54, Method: Composition-based stats. Identities = 83/258 (32%), Positives = 135/258 (52%), Gaps = 2/258 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A+WNVNSIR R+ L +W+ PD++C+QETK ED +FP L + Y GQK Sbjct: 1 MRIASWNVNSIRTRLEQLTSWLVRAAPDVVCMQETKVEDGSFPEAALSEVGYRSVIFGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 SYNGVAI +++ + + + +R+ N+Y+P+G + + Sbjct: 61 SYNGVAIATRFGLSVD--DVKKGLDGDEQDVARRMLAATIEGIRVINVYVPNGQAVGTPA 118 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K++W++R R ++ ++ GD+N+ P+ D P WE F + R + Sbjct: 119 FAYKLAWLERLRSELEARYRPDQQIMICGDFNVAPEAIDVAEPKKWEGQVLFHPDERAAL 178 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +L G DA RA H YS+WDY ++ +NKG+RID +++ + IDT Sbjct: 179 GRLMEWGLVDAFRACHPAKEAYSWWDYRMGAFRRNKGLRIDLALVTRPLAARCTDVSIDT 238 Query: 244 KPRGWTKPSDHTPVIVSL 261 +PR +PSDH PV+V + Sbjct: 239 RPRELQRPSDHAPVVVEI 256 >gi|145594280|ref|YP_001158577.1| exodeoxyribonuclease III Xth [Salinispora tropica CNB-440] gi|145303617|gb|ABP54199.1| Exodeoxyribonuclease III [Salinispora tropica CNB-440] Length = 265 Score = 216 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 78/260 (30%), Positives = 131/260 (50%), Gaps = 2/260 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS++AR+ L W+ NPD++CLQETK D FP + +L Y + + Sbjct: 1 MRLATWNVNSVKARLPRLLDWLAGTNPDVVCLQETKCPDGAFPVAEVGTLGYTVASHSDG 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVAILS+ ++ P + + T LR+ ++Y+P+G + Sbjct: 61 RWNGVAILSRVGLTDVTVGFPDEPGFPDPEARALSATCAG--LRVWSVYVPNGRTLDDPH 118 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K++W+ L PL GD+N+ P D ++P ++ T R + Sbjct: 119 YAYKLAWLGALRDTLEVELTGGAPLAVCGDFNVAPTDSDVWDPALFTGSTHVTPAERTAL 178 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 L+++G D + H +++WDY A + +NKG+RID + S ++ +A +D Sbjct: 179 AALRDLGLDDVVPTPMKGPHPFTYWDYRAGMFHQNKGMRIDLVYASAPFARVVRAAYVDR 238 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 + R PSDH P++V D+ Sbjct: 239 EARKGKGPSDHAPIVVDADL 258 >gi|126729725|ref|ZP_01745538.1| exodeoxyribonuclease III [Sagittula stellata E-37] gi|126709844|gb|EBA08897.1| exodeoxyribonuclease III [Sagittula stellata E-37] Length = 260 Score = 216 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 122/258 (47%), Positives = 167/258 (64%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+N+N I+ARI L+ W++ NPD++ QE K+ D+NFP E + + Y +ET GQK Sbjct: 1 MKIATFNINGIKARIGALSDWLQSANPDVVLAQEIKSVDENFPREHFEDMGYAVETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVAILSK ++ LPGD D QAR+IEAT +T +R+ LYLP+GNP K Sbjct: 61 GFNGVAILSKLPLEDVSRGLPGDPDDEQARWIEATVMGDTTAVRLCGLYLPNGNPAPGPK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 YD K++W++R A Q L E P + AGDYN+IPQ D P W +DA F + RQ+F Sbjct: 121 YDYKLAWMERLHTRAEQLLASEMPAVMAGDYNVIPQAEDAAKPDAWTDDALFLPQTRQAF 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +++ N+GFT+A RA YSFWDY A+SW +N GIRIDH++L+P+A LL+ I+ Sbjct: 181 RRIVNLGFTEAFRARTQGPGHYSFWDYQANSWQRNNGIRIDHLLLTPQAADLLNDCWIEK 240 Query: 244 KPRGWTKPSDHTPVIVSL 261 R KPSDH PV L Sbjct: 241 DVRAAEKPSDHVPVWCDL 258 >gi|302866656|ref|YP_003835293.1| exodeoxyribonuclease III Xth [Micromonospora aurantiaca ATCC 27029] gi|302569515|gb|ADL45717.1| exodeoxyribonuclease III Xth [Micromonospora aurantiaca ATCC 27029] Length = 265 Score = 216 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 75/260 (28%), Positives = 127/260 (48%), Gaps = 2/260 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS++AR+ L W+ PD++CLQETK D FP + L Y + + Sbjct: 1 MRLATWNVNSVKARLPRLLDWLATTKPDVVCLQETKCPDGAFPVAEVGELGYEVASHSDG 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVA+LS+ ++ PG+ + + LR+ ++Y+P+G Sbjct: 61 RWNGVAVLSRVGLADVTVGFPGEPGFPEPEARAI--SATCDELRVWSVYVPNGRAPDDPH 118 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K++W + P+ GD+N+ P D ++P ++ T R + Sbjct: 119 YAYKLAWFAALRDALEPEVAGALPVAVCGDFNVAPTDADVWDPALFVTSTHVTPAERAAL 178 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 L+++G D + H +++WDY A + +NKG+RID + S + SA +D Sbjct: 179 AALRDLGLKDVVPTPMKGPHPFTYWDYRAGMFHQNKGMRIDLVYASASFARAVRSAYVDR 238 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 + R PSDH P++V D+ Sbjct: 239 EARKGKGPSDHAPIVVDADL 258 >gi|116072855|ref|ZP_01470120.1| Exodeoxyribonuclease III xth [Synechococcus sp. BL107] gi|116064381|gb|EAU70142.1| Exodeoxyribonuclease III xth [Synechococcus sp. BL107] Length = 282 Score = 216 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 94/279 (33%), Positives = 144/279 (51%), Gaps = 5/279 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+R+R+ + +W+++ PD++CLQETK +D FP + ++ + + GQK Sbjct: 1 MRIATWNVNSVRSRLDQVLSWLEQAQPDLLCLQETKVDDPLFPSKAFEAKGWRVNFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT----QTLRIGNLYLPHGNPI 119 SYNGVA++S+ ++ G+ +R+ NLY+P+G+ + Sbjct: 61 SYNGVALVSRAPLDDVRYGFVGELEKDPEALDLGEQKRVISALIDGVRVVNLYVPNGSSL 120 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 TS KY K++W+K R+ L+ EPL GD+NI + D + P + Sbjct: 121 TSDKYPYKLTWLKCLKRYLEHPLKRGEPLCVVGDFNIALEARDMHAPDRLSGGIMASDAE 180 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 RQ+ Q G D R +S+WDY + +W +++G RIDHI L E L S Sbjct: 181 RQALQMALANGLQDVFRVFEPDAGHWSWWDYRSGAWDRDRGWRIDHIYLCDELLGLARSC 240 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278 I RG KPSDH PV V LD P P +D ++N Sbjct: 241 VIHKSVRGNDKPSDHAPVSVDLDWP-PSDDDEDGHNEND 278 >gi|78185266|ref|YP_377701.1| exodeoxyribonuclease III xth [Synechococcus sp. CC9902] gi|78169560|gb|ABB26657.1| Exodeoxyribonuclease III [Synechococcus sp. CC9902] Length = 282 Score = 216 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 92/277 (33%), Positives = 144/277 (51%), Gaps = 5/277 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+R+R+ + +W+++ PD++CLQETK +D FP + ++ + + GQK Sbjct: 1 MRIATWNVNSVRSRLDQVLSWLEQAQPDLLCLQETKVDDPLFPLQAFEAKGWRVHFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT----QTLRIGNLYLPHGNPI 119 SYNGVA++S+ ++ G+ F +R+ NLY+P+G+ + Sbjct: 61 SYNGVALVSRAPLDDVRCGFVGELDKDPEAFELGEQKRVISALIDGVRVVNLYVPNGSSL 120 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 TS KY K+ W++ R+ Q L+ EPL GD+NI + D ++P + Sbjct: 121 TSDKYPYKLKWLRCLKRYLEQPLQRGEPLCVVGDFNIALEARDMHDPDRLSGGIMASDPE 180 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R++ Q G D R +S+WDY +W +++G RIDHI L E L S Sbjct: 181 REALQMALESGLQDVFRVFEPDGGHWSWWDYRTGAWDRDRGWRIDHIYLCDELLGLARSC 240 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQ 276 I + RG KPSDH PV V LD P P + ++ Sbjct: 241 VIHKQVRGNEKPSDHAPVSVDLDWP-PSDDDESGDNE 276 >gi|84500937|ref|ZP_00999172.1| exodeoxyribonuclease III [Oceanicola batsensis HTCC2597] gi|84391004|gb|EAQ03422.1| exodeoxyribonuclease III [Oceanicola batsensis HTCC2597] Length = 260 Score = 216 bits (549), Expect = 3e-54, Method: Composition-based stats. Identities = 123/260 (47%), Positives = 168/260 (64%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+N+N I+AR L W+ E PD++ LQE ++ D+NFP E + Y++ET GQK Sbjct: 1 MRIATFNINGIKARHAALTTWLDEAGPDVVLLQEIRSVDENFPREIFEDRGYNVETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 S+NGVAILSK ++ LPGDD D AR+IEAT LR+ LYLP+GNP K Sbjct: 61 SFNGVAILSKLPLEDVTRGLPGDDADDHARWIEATVVGEHAALRVCGLYLPNGNPAPGPK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 YD K++W++R A Q + EEP + AGDYNIIPQP D P W +DA F L+ R ++ Sbjct: 121 YDYKLAWMERLRERARQLIAQEEPALMAGDYNIIPQPEDVARPDAWRDDALFRLDSRDAY 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +++ N+GFT+A R H YSFWDY A +W +N GIRIDHI+++P+ L+ A I+ Sbjct: 181 RRVLNLGFTEAFRTRHPAPGHYSFWDYQAGAWQRNNGIRIDHILMTPQCADLMQDAGIEK 240 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 + RG KPSDH PV V L + Sbjct: 241 ELRGREKPSDHVPVWVDLAV 260 >gi|315503070|ref|YP_004081957.1| exodeoxyribonuclease iii xth [Micromonospora sp. L5] gi|315409689|gb|ADU07806.1| exodeoxyribonuclease III Xth [Micromonospora sp. L5] Length = 265 Score = 216 bits (549), Expect = 4e-54, Method: Composition-based stats. Identities = 75/260 (28%), Positives = 127/260 (48%), Gaps = 2/260 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS++AR+ L W+ PD++CLQETK D FP + L Y + + Sbjct: 1 MRLATWNVNSVKARLPRLLDWLATTKPDVVCLQETKCPDGAFPVAEVGELGYEVASHSDG 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVA+LS+ ++ PG+ + + LR+ ++Y+P+G Sbjct: 61 RWNGVAVLSRVGLADVTVGFPGEPGFPEPEARAI--SATCDELRVWSVYVPNGRAPDDPH 118 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K++W + P+ GD+N+ P D ++P ++ T R + Sbjct: 119 YAYKLAWFAALRDALESEVAGALPVAVCGDFNVAPTDADVWDPALFVTSTHVTPAERAAL 178 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 L+++G D + H +++WDY A + +NKG+RID + S + SA +D Sbjct: 179 AALRDLGLEDVVPTPMKGPHPFTYWDYRAGMFHQNKGMRIDLVYASASFARAVRSAYVDR 238 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 + R PSDH P++V D+ Sbjct: 239 EARKGKGPSDHAPIVVDADL 258 >gi|56697356|ref|YP_167724.1| exodeoxyribonuclease III [Ruegeria pomeroyi DSS-3] gi|56679093|gb|AAV95759.1| exodeoxyribonuclease III [Ruegeria pomeroyi DSS-3] Length = 268 Score = 216 bits (549), Expect = 4e-54, Method: Composition-based stats. Identities = 120/268 (44%), Positives = 162/268 (60%), Gaps = 8/268 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+N+N I+AR L AW+ PD+ LQE K+ D++FP E + Y++ET GQK Sbjct: 1 MKIATFNINGIKARAEALPAWLDSAQPDVALLQEIKSVDESFPREMFEERGYNVETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT----FTINTQTLRIGNLYL----PH 115 +NGVAILSK ++ LPGDD D QAR+IEAT + L + N Sbjct: 61 GFNGVAILSKLPLEDVSRGLPGDDSDEQARWIEATVVGKQALRLCGLYLPNGNPVELTES 120 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 G+P+ KYD K+ W++R A++ + EEP + AGDYNIIPQ D P W DA F Sbjct: 121 GDPVPGGKYDYKLRWMERLQARATELMAAEEPALMAGDYNIIPQAEDAKRPEAWREDALF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R +F+++ N+GFT+A RA YSFWDY A +W++N GIRIDH +L+P+A L Sbjct: 181 RPESRAAFRRILNLGFTEAFRARVQGPGHYSFWDYQAGAWNRNDGIRIDHFLLTPQAADL 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + ID + RG KPSDH PV V LDI Sbjct: 241 MRDCGIDKEVRGRDKPSDHVPVWVELDI 268 >gi|295395722|ref|ZP_06805913.1| exodeoxyribonuclease III [Brevibacterium mcbrellneri ATCC 49030] gi|294971422|gb|EFG47306.1| exodeoxyribonuclease III [Brevibacterium mcbrellneri ATCC 49030] Length = 261 Score = 216 bits (549), Expect = 4e-54, Method: Composition-based stats. Identities = 73/261 (27%), Positives = 121/261 (46%), Gaps = 1/261 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + TWNVNS+RAR + A++ ++ D++ +QE K +D FP + Y + G Sbjct: 1 MRIVTWNVNSVRARAERIGAFLDRSDVDVLAIQELKCKDAQFPAHVFEDRGYEVAFHGLN 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDD-LDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 +NGVA+ S+ ++ G + + T +R +LY+P+G + Sbjct: 61 QWNGVAVASRVGLDDVEVGFEGVPGFGDDDQVEARAISAVTGGVRTYSLYVPNGRELDHP 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 Y K+ W+ + A RLE + P + GD+N+ P D ++ +E + R + Sbjct: 121 HYAYKLEWLAQLRNEALVRLEQDVPFVMCGDFNVAPLDEDVWDMAAFEGATHVSQPERDA 180 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F L + G T+ R +Y+FWDY + K +G+RID + SP A ID Sbjct: 181 FNGLISAGLTEVTRQFTPGPGVYTFWDYQQLRFPKKQGMRIDFQLASPSLAERATGAFID 240 Query: 243 TKPRGWTKPSDHTPVIVSLDI 263 + R SDH PV V + Sbjct: 241 REERKGKGASDHAPVWVDYQL 261 >gi|254436254|ref|ZP_05049761.1| exodeoxyribonuclease III [Nitrosococcus oceani AFC27] gi|207089365|gb|EDZ66637.1| exodeoxyribonuclease III [Nitrosococcus oceani AFC27] Length = 254 Score = 216 bits (549), Expect = 4e-54, Method: Composition-based stats. Identities = 89/258 (34%), Positives = 141/258 (54%), Gaps = 5/258 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+R R + W++ + PD++ LQETK D +FP E + + YH GQK Sbjct: 1 MKIATWNVNSLRVRFSQVVDWLEIHQPDVLALQETKLVDDSFPQEAFKEIGYHAAYSGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAIL + P +I+T LP + + +R+ NLY+P+G+ + S K Sbjct: 61 TYNGVAILCRQAPKDILTDLPNLVDSQRRIL-----GVTVDDIRLLNLYVPNGSEVGSKK 115 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W+ R + + L LI GD+N+ P D ++P IW + R++ Sbjct: 116 YAYKLDWLGRIKDYLQEALVEYPKLIVLGDFNVAPADQDVHDPDIWHETILCSTPEREAL 175 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +++ +GF D+ R +S+WDY ++ +N+G+RID I++S ID Sbjct: 176 KEILALGFQDSFRLFEQEAQSFSWWDYRGGAFRRNRGLRIDLILISKALVPKCTGCVIDK 235 Query: 244 KPRGWTKPSDHTPVIVSL 261 +PR T+PSDH PVI + Sbjct: 236 EPRRLTRPSDHAPVIATF 253 >gi|152980157|ref|YP_001354134.1| exodeoxyribonuclease III [Janthinobacterium sp. Marseille] gi|151280234|gb|ABR88644.1| exodeoxyribonuclease III [Janthinobacterium sp. Marseille] Length = 254 Score = 215 bits (548), Expect = 4e-54, Method: Composition-based stats. Identities = 100/259 (38%), Positives = 149/259 (57%), Gaps = 5/259 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS++ R+ + W+ +N D++CLQETKT ++ FP +++ YH+ GQK Sbjct: 1 MKIATWNVNSLKVRLPQVLQWLTDNPVDVLCLQETKTVNEKFPLAEIEAAGYHVVYTGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAILS++ ++V + P D + Q I +RI Y+P+G + S K Sbjct: 61 TYNGVAILSRHPIDDVVKNNPLFDDEHQRIIIGTIQG-----VRIICAYIPNGQSLESDK 115 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W+ + L+ E + GDYNI P+ D ++P+ W+ + R +F Sbjct: 116 YQYKLRWLAGLHELLAHELKQHENVALLGDYNIAPEDRDVHDPVAWQGQVLVSEPERAAF 175 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 ++Q MGFTDA R LYS+WDY + N+G+RIDHI+LSP + ID Sbjct: 176 VRMQEMGFTDAFRMFEQAEKLYSWWDYRQMGFRLNRGLRIDHILLSPSLAKRCTACVIDK 235 Query: 244 KPRGWTKPSDHTPVIVSLD 262 PR W +PSDHTPVI +LD Sbjct: 236 VPRKWEQPSDHTPVIATLD 254 >gi|163793122|ref|ZP_02187098.1| Exonuclease III [alpha proteobacterium BAL199] gi|159181768|gb|EDP66280.1| Exonuclease III [alpha proteobacterium BAL199] Length = 259 Score = 215 bits (548), Expect = 4e-54, Method: Composition-based stats. Identities = 115/258 (44%), Positives = 166/258 (64%), Gaps = 3/258 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A+WNVNS++AR+ N+ W+K +PD++ LQE KT D FP +++L Y GQK Sbjct: 1 MKIASWNVNSVKARLDNVLDWLKTASPDVVLLQEIKTVDDGFPRLEIEALGYQCAIHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 SYNGVAILSK ++ L GDD D QAR++EAT +R+ +YLP+GNP+TS K Sbjct: 61 SYNGVAILSKVGLADVQPRLFGDDNDEQARYLEATV---GGEVRVATIYLPNGNPVTSEK 117 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K++W+KR A++ L E ++ GDYN+IP D ++P W DA E R +F Sbjct: 118 YPYKLAWMKRLKARATELLRAEGAVVLGGDYNVIPTDDDVHDPAAWAGDALCRPETRAAF 177 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +++ +G+TDA RA T H Y+FWDY +W +++G+RIDH++LSP+A L ++ IDT Sbjct: 178 REILWLGYTDAFRALDQTVHKYTFWDYQGGAWQRDEGVRIDHLLLSPQAADRLTASGIDT 237 Query: 244 KPRGWTKPSDHTPVIVSL 261 PR K SDHTPV + Sbjct: 238 APRAKPKASDHTPVWCEI 255 >gi|91787699|ref|YP_548651.1| exodeoxyribonuclease III [Polaromonas sp. JS666] gi|91696924|gb|ABE43753.1| Exodeoxyribonuclease III [Polaromonas sp. JS666] Length = 267 Score = 215 bits (548), Expect = 4e-54, Method: Composition-based stats. Identities = 86/262 (32%), Positives = 128/262 (48%), Gaps = 1/262 (0%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + +ATWNVNS+ R+ + W+ N D++CLQE K D FP + L Y G Sbjct: 6 KTMKIATWNVNSLAVRLPQVLDWLAANPVDVLCLQELKLSDDKFPLQALADAGYQSAVFG 65 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 QK+YNGVAILS+ IV ++ G + AT + +R+ N Y +G + Sbjct: 66 QKTYNGVAILSRTPARNIVKNIAGFTDEQSRVI-AATLDTPSGEVRVVNGYFVNGQAPGT 124 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 K++ K+ W+ + + L L+ GD+NI D Y+ T + RQ Sbjct: 125 EKFEYKMRWLDGLRAWLREELAEHSRLVLVGDFNITADDRDTYDAQGLHETIHHTADERQ 184 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 Q L +G DA R YS+WDY ++ +N+G+RID+I++S + S I Sbjct: 185 HLQALLGLGLHDAFRLFEQPEKTYSWWDYREFAFRRNRGLRIDYILVSNALKPAVKSCLI 244 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 D PR +PSDH PV+ LD Sbjct: 245 DKLPRKNERPSDHAPVVAELDW 266 >gi|254526744|ref|ZP_05138796.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9202] gi|221538168|gb|EEE40621.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9202] Length = 281 Score = 215 bits (548), Expect = 5e-54, Method: Composition-based stats. Identities = 97/266 (36%), Positives = 148/266 (55%), Gaps = 4/266 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSIR R+ + WI + NPDI+CLQETK D +FP E + L Y +E GQK Sbjct: 1 MLIATWNVNSIRTRLSQIIDWINQVNPDILCLQETKVMDDSFPTEPFEKLGYAVEVYGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT----INTQTLRIGNLYLPHGNPI 119 SYNGVAI+SK +P + G Q I + ++I N+Y+P+G+ + Sbjct: 61 SYNGVAIISKTKPENVKKGFYGCTNFNQNIEIFQDQKRLISADINNIKIINVYVPNGSSL 120 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 S+K++ KI+W+ F ++ + E + GD+NI P D ++P +E + Sbjct: 121 ESSKFEYKINWLNCLGSFLDEQEKKGELICLLGDFNIAPSNLDIHDPKKYEGGIMASEIE 180 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R + + D+ R +S+WDY +++ NKG RIDHI +S E +S L S Sbjct: 181 RNALNNVLKKRLIDSFRIFEQNTGHWSWWDYRNNAFELNKGWRIDHIYISKELSSKLKSC 240 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPE 265 ID PRG+ +PSDH PV++ L++ + Sbjct: 241 VIDCSPRGYLRPSDHAPVMIDLNLND 266 >gi|159037346|ref|YP_001536599.1| exodeoxyribonuclease III Xth [Salinispora arenicola CNS-205] gi|157916181|gb|ABV97608.1| exodeoxyribonuclease III Xth [Salinispora arenicola CNS-205] Length = 265 Score = 215 bits (548), Expect = 5e-54, Method: Composition-based stats. Identities = 80/260 (30%), Positives = 129/260 (49%), Gaps = 2/260 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS++AR+ L W+ PD++CLQETK D FP + +L Y + + Sbjct: 1 MRLATWNVNSVKARLPRLLDWLAGTEPDVVCLQETKCPDGAFPVAEVGALGYTVASHSDG 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVAILS+ E+ PG+ T LR+ ++Y+P+G Sbjct: 61 RWNGVAILSRVGLTEVTVGFPGEPGFPDPEARALAATCAG--LRVWSVYVPNGRTPDDPH 118 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K++W+ L PL GD+N+ P D ++P ++ T R + Sbjct: 119 YAYKLAWLGALRDALEVELTGGPPLAVCGDFNVAPTDADVWDPALFTGSTHVTPAERVAL 178 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 L+++G D + H +++WDY A + +NKG+RID + S T + +A +D Sbjct: 179 SALRDLGLADVVPTPMKGPHPFTYWDYRAGMFHQNKGMRIDLVYASAPFTRAVRAAYVDR 238 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 + R PSDH P++V D+ Sbjct: 239 EARKGKGPSDHAPIVVDADL 258 >gi|288960179|ref|YP_003450519.1| exodeoxyribonuclease III [Azospirillum sp. B510] gi|288912487|dbj|BAI73975.1| exodeoxyribonuclease III [Azospirillum sp. B510] Length = 257 Score = 215 bits (547), Expect = 6e-54, Method: Composition-based stats. Identities = 115/258 (44%), Positives = 158/258 (61%), Gaps = 4/258 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS +AR+ + W++ +PD+ QE K E FP + L YH+ GQK Sbjct: 1 MKIATWNVNSAKARLPLITDWLRAVSPDVALFQEIKCETAAFPRAAFEELGYHVNAVGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVA+LSK +++T LPG+ D QAR++EAT +RI +LYLP+GNP+ K Sbjct: 61 AYNGVALLSKTPAEDVLTRLPGEPEDEQARYVEATVAG----VRIASLYLPNGNPVPGEK 116 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W+ R A L E P++ GDYNIIP+ D ++P + DA F E R F Sbjct: 117 FAYKLRWMDRLYDHARGLLAREIPVVLGGDYNIIPEARDVFSPQAFAGDALFQPESRAKF 176 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + L N+G T+A RA HD Y+FWDY A W ++ G+RIDH +LSP+A L RID Sbjct: 177 RALLNLGLTEAYRALHDDDRAYTFWDYQAGCWPRDNGLRIDHFLLSPQAADRLAGCRIDR 236 Query: 244 KPRGWTKPSDHTPVIVSL 261 PRG K SDHTPV++ L Sbjct: 237 GPRGLEKASDHTPVVLDL 254 >gi|257055607|ref|YP_003133439.1| Exodeoxyribonuclease III [Saccharomonospora viridis DSM 43017] gi|256585479|gb|ACU96612.1| Exodeoxyribonuclease III [Saccharomonospora viridis DSM 43017] Length = 259 Score = 215 bits (547), Expect = 6e-54, Method: Composition-based stats. Identities = 75/260 (28%), Positives = 127/260 (48%), Gaps = 1/260 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSI AR+ + AW++ PD++CLQE K D FP + + L Y + + G Sbjct: 1 MRIATWNVNSITARLPRVLAWLRSTQPDVLCLQELKCSDDGFPRDDITELGYDVASYGAN 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVAILS+ ++ L + A A +R+ ++Y+P+G Sbjct: 61 RWNGVAILSRVGLEDVTRGLVDEPTYEDALHPRAVAATCGG-VRVWSVYVPNGREPDHPH 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W++ + P GD+NI P D ++ ++ + T R++ Sbjct: 120 YTYKLRWLEALHTTVLAENSDDRPFAVLGDFNIAPTDDDVWDISLFADSTHVTEPERKAL 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +L++ G TD + Y++WDY ++ KN+G+RID + + + A +D Sbjct: 180 ARLRDAGLTDVVPRALKYDRPYTYWDYRQLAFPKNRGMRIDLVYANRPFADAVTDAYVDR 239 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 + R SDH PV+V L + Sbjct: 240 EERKGKGASDHAPVVVDLTL 259 >gi|152968141|ref|YP_001363925.1| exodeoxyribonuclease III Xth [Kineococcus radiotolerans SRS30216] gi|151362658|gb|ABS05661.1| exodeoxyribonuclease III Xth [Kineococcus radiotolerans SRS30216] Length = 266 Score = 215 bits (547), Expect = 6e-54, Method: Composition-based stats. Identities = 78/262 (29%), Positives = 127/262 (48%), Gaps = 4/262 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+RAR+ + AWI ++ D++ LQETK +D+ FP + + L Y + G Sbjct: 1 MRLATWNVNSVRARLDRVLAWIDRSDVDVVALQETKCKDEQFPEQAFRDLGYEVAHHGLS 60 Query: 64 SYNGVAILSKYQPIEIVTHL--PGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +NGVA+LS+ ++ T +R+ +LY+P+G + Sbjct: 61 QWNGVALLSRVGLEDVSTAFSPDVPRFGEPPVVEARAVGALCGGVRVWSLYVPNGRGLED 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEE--PLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 Y K+ W++R L + + GD+NI P D ++P + + Sbjct: 121 PHYPYKLEWLERLREAGRGWLAQDPAAQVALVGDFNIAPTDEDVWDPEAFAGATHVSAPE 180 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R +F L GF D +R Y++WDY ++K +G+RID ++ SP + + A Sbjct: 181 RAAFTALVEAGFADVVRPHAPGPGTYTYWDYQQLRFAKRQGMRIDFVLGSPALAARVSGA 240 Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261 ID + R SDH PV+V L Sbjct: 241 TIDREERKGKGASDHAPVVVEL 262 >gi|323529504|ref|YP_004231656.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1001] gi|323386506|gb|ADX58596.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1001] Length = 269 Score = 215 bits (547), Expect = 6e-54, Method: Composition-based stats. Identities = 107/271 (39%), Positives = 153/271 (56%), Gaps = 5/271 (1%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 M+ + +AT+N+N IR+R L W++ PDI+CLQE K D FP + L+ YH Sbjct: 1 MATLRIATFNINGIRSRQAALLQWLEREAPDIVCLQELKAADSAFPADALRDAGYHAIWQ 60 Query: 61 GQKSYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 GQ ++NGVAILSK P+E LPG + D +R++EA L + LYLP+GNP Sbjct: 61 GQSAWNGVAILSKGEPPLESRRGLPGFEDDTHSRYLEAAVGG----LLVCCLYLPNGNPQ 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K++ K+ W + A++ L P++ AGD+N++P D YNP W DA E Sbjct: 117 PGPKFEYKLKWFDHLIDHAAKLLRSGHPVVLAGDFNVVPTDEDIYNPRSWLKDALLQPES 176 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R+ +++L G+TDA+R +Y+FWDY+ W N G+RIDHI+LSP+ L A Sbjct: 177 RERYRRLVAQGWTDALRTHFGDERVYTFWDYFRRHWDTNSGLRIDHILLSPDLAPRLRDA 236 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQ 270 +D RG SDH P V LD+ R+K Sbjct: 237 GVDRWVRGEPHASDHAPTWVELDMGAKRRKA 267 >gi|126695849|ref|YP_001090735.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9301] gi|126542892|gb|ABO17134.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9301] Length = 281 Score = 215 bits (547), Expect = 6e-54, Method: Composition-based stats. Identities = 98/264 (37%), Positives = 145/264 (54%), Gaps = 4/264 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSIR R+ + WI + NPDI+CLQETK D NFP E + L Y +E GQK Sbjct: 1 MLIATWNVNSIRTRLSQIIDWINQVNPDILCLQETKVMDDNFPVEPFEKLGYSLEIYGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT----INTQTLRIGNLYLPHGNPI 119 SYNGVAI+SK +P + G Q I + ++I N+Y+P+G+ + Sbjct: 61 SYNGVAIISKIKPENVKKGFNGCTESNQNSEIFLDQKRLISADINGIKIINVYVPNGSSL 120 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 S+K+ KI+W+ F ++ + E + GD+N+ P D ++P +E + Sbjct: 121 DSSKFAYKINWLNCLSSFLDEQEKKGELICLMGDFNVAPSNLDIHDPKKYEGGIMASEIE 180 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R + + + D+ R +S+WDY + + NKG RIDHI +S E TS L S Sbjct: 181 RNALKNVLKKRLIDSFRIFEQNTGHWSWWDYRNNGFELNKGWRIDHIYISKELTSKLKSC 240 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 ID PRG +PSDH PV++ L++ Sbjct: 241 VIDCSPRGNLRPSDHAPVMIELNL 264 >gi|311105771|ref|YP_003978624.1| exodeoxyribonuclease III 1 [Achromobacter xylosoxidans A8] gi|310760460|gb|ADP15909.1| exodeoxyribonuclease III 1 [Achromobacter xylosoxidans A8] Length = 260 Score = 215 bits (547), Expect = 7e-54, Method: Composition-based stats. Identities = 88/259 (33%), Positives = 136/259 (52%), Gaps = 1/259 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ R+ + W+ N D++C+QE K D FP YH GQK Sbjct: 1 MKLATWNVNSLNVRLPQVLDWLAANPVDVLCIQELKLTDDKFPEAAFTEAGYHAVWAGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAI+S+ +V ++PG + D Q R + TF +R+ Y P+G + S K Sbjct: 61 TYNGVAIISRVPGTSMVRNIPGYE-DPQQRVLALTFPSPEGDVRVVCAYCPNGQAVGSDK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W + + + ++ L GDYN+ P D +NP WE + R++F Sbjct: 120 YAYKLDWFEAMRAWLADEIKQYPRLAVLGDYNVAPADEDVHNPEKWEGQVLVSEPERKAF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 L ++G D+ R +S+WDY ++ +N G+RIDH++LS + ID Sbjct: 180 GALLDLGLADSFRLFEQPEKSFSWWDYRQFAFRRNAGLRIDHVLLSAPLVKRCIACAIDK 239 Query: 244 KPRGWTKPSDHTPVIVSLD 262 +PR +PSDH PVI +L+ Sbjct: 240 EPRRNEQPSDHAPVIATLE 258 >gi|86605184|ref|YP_473947.1| exodeoxyribonuclease III [Synechococcus sp. JA-3-3Ab] gi|86553726|gb|ABC98684.1| exodeoxyribonuclease III [Synechococcus sp. JA-3-3Ab] Length = 261 Score = 215 bits (546), Expect = 7e-54, Method: Composition-based stats. Identities = 92/262 (35%), Positives = 138/262 (52%), Gaps = 3/262 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNP-DIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + VATWNVNSIR R+ + AW+ + D++CLQETK D FP + +H+E GQ Sbjct: 1 MQVATWNVNSIRTRLPQVLAWLDKQGSLDVLCLQETKVVDAEFPRAPFEERGFHVEVYGQ 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT-FTINTQTLRIGNLYLPHGNPITS 121 K+YNGVA++S+ P ++ + + +RI NLY+P+G + S Sbjct: 61 KAYNGVALISREVPEKVERGFAALLPAAAELDEQKRLIGGLYRGIRILNLYVPNGEAVGS 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 KY K+ W+ + L+ +P++ GD+NI P+ D Y+P E + Sbjct: 121 DKYAYKLRWLACLKDYLQVALDQGQPILLCGDFNIAPEDRDIYDPGKAGEIMASEPERQ- 179 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 + QK+ +GF DA R + +S+WDY + KN+G RIDH+ LSP + I Sbjct: 180 ALQKILALGFEDAFRKFNPDPGHFSWWDYRGGGFQKNRGWRIDHLYLSPLLQDKATACWI 239 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 D +PR KPSDH PV+V L + Sbjct: 240 DVEPRRAEKPSDHAPVVVELAV 261 >gi|119899170|ref|YP_934383.1| exodeoxyribonuclease III [Azoarcus sp. BH72] gi|119671583|emb|CAL95496.1| exodeoxyribonuclease III [Azoarcus sp. BH72] Length = 253 Score = 215 bits (546), Expect = 7e-54, Method: Composition-based stats. Identities = 86/260 (33%), Positives = 138/260 (53%), Gaps = 7/260 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS++ R+ ++ W+ N PD +CLQE K EDK FP LQ+ Y+ GQK Sbjct: 1 MKIATWNVNSLKVRLPHVLDWLAANQPDALCLQELKLEDKGFPVAELQAAGYNAVFNGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAILS + ++V +PG + + +RI Y P+G + S K Sbjct: 61 TYNGVAILSPHPLEDVVRDIPGFSDEQKRIIAATVNG-----VRIVCGYFPNGQAVGSDK 115 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 ++ K+ W+ + L L+ GD+NI P+ D + W+++ + R +F Sbjct: 116 FEYKLRWLGALTEWLRAELTAHPRLVLGGDFNIAPEDRDAHPD--WKDEIHVSAPERAAF 173 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 L +G DA R +S+WDY ++ +N G+RIDH+++SP + +D Sbjct: 174 TALTALGLVDAFRLYDQPERAFSWWDYRMGAFRRNFGLRIDHLLVSPALQPACRACTVDK 233 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 PR +PSDH PV++ L++ Sbjct: 234 APRKLERPSDHAPVVLDLEV 253 >gi|220933200|ref|YP_002512099.1| exodeoxyribonuclease III [Thioalkalivibrio sp. HL-EbGR7] gi|219994510|gb|ACL71112.1| exodeoxyribonuclease III [Thioalkalivibrio sp. HL-EbGR7] Length = 255 Score = 215 bits (546), Expect = 7e-54, Method: Composition-based stats. Identities = 85/258 (32%), Positives = 141/258 (54%), Gaps = 5/258 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS++ R+ + W+ PD++ LQETK D FP E ++ YH GQK Sbjct: 1 MKIATWNVNSLKVRLPQVLDWLAAQQPDVLALQETKLTDDAFPVEAIREAGYHCVYSGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAIL++++ ++ +T + G D + +R+ NLY+ +G+ + S K Sbjct: 61 TYNGVAILARHELLDPLTDIDGLDDPQRRILAATVDG-----VRVINLYVVNGSEVGSEK 115 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W+ + F + ++ E L+ GD+NI P+ D ++P W + R++ Sbjct: 116 YAYKLDWLGKVTGFIAGEMKRHEKLVVLGDFNIAPEDRDVHDPEAWHEKILCSTPEREAL 175 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +K+ ++G +D R +S+WDY A + +N G+RID I+ SP T + ID Sbjct: 176 KKILDLGLSDCFRRFEQPEQSFSWWDYRAAGFRRNLGLRIDLILSSPALTETCTACIIDV 235 Query: 244 KPRGWTKPSDHTPVIVSL 261 +PR +PSDH PV+ Sbjct: 236 EPRRLERPSDHAPVVAEF 253 >gi|148360698|ref|YP_001251905.1| hypothetical protein LPC_2645 [Legionella pneumophila str. Corby] gi|296106237|ref|YP_003617937.1| exodeoxyribonuclease III [Legionella pneumophila 2300/99 Alcoy] gi|148282471|gb|ABQ56559.1| hypothetical protein LPC_2645 [Legionella pneumophila str. Corby] gi|158512142|gb|ABW69103.1| exodeoxyribonuclease III [Legionella pneumophila] gi|295648138|gb|ADG23985.1| exodeoxyribonuclease III [Legionella pneumophila 2300/99 Alcoy] Length = 256 Score = 215 bits (546), Expect = 7e-54, Method: Composition-based stats. Identities = 91/261 (34%), Positives = 151/261 (57%), Gaps = 5/261 (1%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +A+WNVNS++ R+ + W++ + D++ +QETK D NFP + YH+ GQ Sbjct: 1 MFKLASWNVNSLKVRLEQVLQWLESSQVDVLAMQETKLTDDNFPVASFTDKGYHVIFSGQ 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K+YNGVAI+S+Y +I T +P + + +R+ NLY+P+G +TS Sbjct: 61 KTYNGVAIISRYPMTDIQTDIPELEDPQRRILAATVKG-----IRLINLYVPNGGELTSD 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 KY K+ W+K+ RF +L + + GD+NI P+ D ++P+ WE + RQ+ Sbjct: 116 KYQYKLDWLKKVTRFIQHQLSIYSKVAVVGDFNIAPEDRDVHDPVEWEGCVLVSPAERQA 175 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F ++ +G D+ R +S+WDY A ++ +N+G+RIDH++LS E +L ++ID Sbjct: 176 FMEILELGLHDSFRNFAQEEKAFSWWDYRAAAFRRNRGLRIDHVLLSHELNALCRQSKID 235 Query: 243 TKPRGWTKPSDHTPVIVSLDI 263 +PR +PSDH PV V L++ Sbjct: 236 KEPRKAERPSDHAPVWVELEL 256 >gi|157412901|ref|YP_001483767.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9215] gi|157387476|gb|ABV50181.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9215] Length = 281 Score = 215 bits (546), Expect = 8e-54, Method: Composition-based stats. Identities = 96/266 (36%), Positives = 147/266 (55%), Gaps = 4/266 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSIR R+ + WI + NPDI+CLQETK D +FP E + L Y +E GQK Sbjct: 1 MLIATWNVNSIRTRLSQIIDWINQVNPDILCLQETKVMDDSFPTEPFEKLGYAVEVYGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT----INTQTLRIGNLYLPHGNPI 119 SYNGVAI+SK +P + G Q I + ++I N+Y+P+G+ + Sbjct: 61 SYNGVAIISKTKPENVKKGFYGCTNFNQNIEIFQDQKRLISADINNIKIINVYVPNGSSL 120 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 S+K+ KI+W+ F ++ + E + GD+N+ P D ++P +E + Sbjct: 121 ESSKFKYKINWLNCLASFLDEQEKKGELICLLGDFNVAPSNLDIHDPKKYEGGIMASEIE 180 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R + + D+ R +S+WDY +++ NKG RIDHI +S E +S L S Sbjct: 181 RNALNNVLKKRLIDSFRIFEQNTGHWSWWDYRNNAFELNKGWRIDHIYISKELSSKLKSC 240 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPE 265 ID PRG+ +PSDH PV++ L++ + Sbjct: 241 VIDCSPRGYLRPSDHAPVMIDLNLND 266 >gi|85375417|ref|YP_459479.1| hypothetical protein ELI_12950 [Erythrobacter litoralis HTCC2594] gi|84788500|gb|ABC64682.1| hypothetical protein ELI_12950 [Erythrobacter litoralis HTCC2594] Length = 262 Score = 215 bits (546), Expect = 9e-54, Method: Composition-based stats. Identities = 95/259 (36%), Positives = 145/259 (55%), Gaps = 1/259 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+N+N I+AR+ L W++E P + CLQE K++D FP + + + YH GQK Sbjct: 1 MRIATFNINGIKARLPRLIEWLEETRPTVACLQEIKSQDDGFPADEFEKIGYHAIWHGQK 60 Query: 64 SYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 S+NGVAIL+ +P E L D + +RI LYLP+GNP Sbjct: 61 SFNGVAILADGVKPEETQRGLGVDGPKEGEGEQARYLEAHVNGVRIACLYLPNGNPHPGP 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K+D K++W+++ + + E+P I GD+N+IP D ++P ++DA E R + Sbjct: 121 KFDYKLAWMEKLRARMRELWQSEQPTIVTGDFNVIPHDDDVWSPKAMQDDALMQPESRDA 180 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 +Q+ G+TDA+R + +++FWDY +W ++ G RIDH +LSPE L + +D Sbjct: 181 YQRQLADGWTDAVRTLNPRGGVWTFWDYQRGAWQRDHGFRIDHCLLSPELADRLTAVGVD 240 Query: 243 TKPRGWTKPSDHTPVIVSL 261 RG K SDHTPV V L Sbjct: 241 KDYRGREKASDHTPVWVEL 259 >gi|71909260|ref|YP_286847.1| exodeoxyribonuclease III [Dechloromonas aromatica RCB] gi|71848881|gb|AAZ48377.1| Exodeoxyribonuclease III [Dechloromonas aromatica RCB] Length = 254 Score = 214 bits (545), Expect = 9e-54, Method: Composition-based stats. Identities = 82/258 (31%), Positives = 131/258 (50%), Gaps = 5/258 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A+WNVNS++ R+ +L W+ PD +CLQE K ED NFP +++ Y + GQK Sbjct: 1 MKIASWNVNSLKVRLPHLLDWLAAAQPDALCLQELKLEDHNFPRAEIEAAGYQVAFSGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVA+L++ +++ P + + R+ Y+P+G + S K Sbjct: 61 TYNGVALLARQPIHDVICGNPHFPDEQKRLISGTVGDT-----RVVCAYMPNGQAVGSDK 115 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 YD K+ W+ + + + L GDYNI P D ++P W + + R +F Sbjct: 116 YDYKLRWLDALAVWLGEEMSKYPKLALCGDYNIAPDDRDVHDPKAWAGNILCSEPERAAF 175 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q+ +G D+ R +S+WDY + KN G+RIDH++LS + +A ID Sbjct: 176 QRFIGLGLNDSFRLFEQPEKTFSWWDYRMLGFQKNLGLRIDHVLLSAPLAAKCSAAGIDR 235 Query: 244 KPRGWTKPSDHTPVIVSL 261 PR +PSDH PV + Sbjct: 236 APRKLERPSDHAPVWAEI 253 >gi|237747770|ref|ZP_04578250.1| exodeoxyribonuclease III [Oxalobacter formigenes OXCC13] gi|229379132|gb|EEO29223.1| exodeoxyribonuclease III [Oxalobacter formigenes OXCC13] Length = 255 Score = 214 bits (545), Expect = 9e-54, Method: Composition-based stats. Identities = 99/260 (38%), Positives = 146/260 (56%), Gaps = 5/260 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS++ R+ ++ W+++N D++CLQETK D FP + + Y + GQK Sbjct: 1 MKIATWNVNSLKVRLPHVLQWLEDNPVDVLCLQETKLTDDKFPVMEIGAAGYQVAFTGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAILSK +IV + P + Q +RI Y+P+G + S K Sbjct: 61 TYNGVAILSKKPVTDIVKNNPLFPDEQQRIVAAT-----VDNIRIVCAYVPNGQAVGSEK 115 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W++ ++ ++ + L GDYNI P+ D Y+P+ WE + + R +F Sbjct: 116 YSYKLDWLRSLTQWLAEERQKHPYLALLGDYNIAPEDRDVYDPVAWEGNVLVSPPERDAF 175 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + LQ++ F DA R YS+WDY + KN+G+RIDHI+LS + ID Sbjct: 176 RALQDIDFIDAYRLFEQPEKSYSWWDYRQLGFQKNRGLRIDHILLSKALAPHCTACTIDR 235 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 PR WT+PSDHTPVI LDI Sbjct: 236 IPRKWTQPSDHTPVIAELDI 255 >gi|53802810|ref|YP_115457.1| exodeoxyribonuclease III [Methylococcus capsulatus str. Bath] gi|53756571|gb|AAU90862.1| exodeoxyribonuclease III [Methylococcus capsulatus str. Bath] Length = 256 Score = 214 bits (545), Expect = 9e-54, Method: Composition-based stats. Identities = 88/259 (33%), Positives = 135/259 (52%), Gaps = 5/259 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+R R+ + W+ P ++ +QETK D FP E L+++ YH GQK Sbjct: 1 MKIATWNVNSLRVRLPQVLDWLDSVQPGVLAVQETKLTDDAFPVEALRAVGYHAVYSGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVA+LSK +++T P D + + LRI NLY+P+G+ + S K Sbjct: 61 TYNGVAVLSKAPVEDVLTDPPNLDDPQRRIL-----AVTAGPLRIINLYVPNGSEVGSDK 115 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W+ + F ++ + + GD+NI P+ D ++P W + R +F Sbjct: 116 YAYKLDWLAKVRDFIAEEMAAHPHTVVLGDFNIAPEDRDVHDPESWREKILCSTPERDAF 175 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + +G +D R +S+WDY A + +N G+RIDHI+ S + ID Sbjct: 176 RAWAGLGLSDLFRRFEQPEGSFSWWDYRAAGFRRNLGLRIDHILASLPLAGRCTACSIDK 235 Query: 244 KPRGWTKPSDHTPVIVSLD 262 PR +PSDH PVI D Sbjct: 236 TPRSLERPSDHAPVIAEFD 254 >gi|254293701|ref|YP_003059724.1| exodeoxyribonuclease III Xth [Hirschia baltica ATCC 49814] gi|254042232|gb|ACT59027.1| exodeoxyribonuclease III Xth [Hirschia baltica ATCC 49814] Length = 259 Score = 214 bits (545), Expect = 9e-54, Method: Composition-based stats. Identities = 117/260 (45%), Positives = 163/260 (62%), Gaps = 1/260 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A+WNVNS+ AR+ + +K D++C QE K D NFP ++ + Y+I T GQK Sbjct: 1 MKIASWNVNSVNARLPTVLEVLKNLELDVVCFQEIKCIDDNFPRLEIEDMGYNIITHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 SYNGVAILSK+ ++ LPGDD D QAR+IEA T +R+ ++YLP+GNP K Sbjct: 61 SYNGVAILSKHPIEDVQIGLPGDDEDDQARYIEALIMGETP-VRVASIYLPNGNPFPGPK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 +D K++W+ R A + L EE ++ AGDYN IP+ DCY+P W +DA E R F Sbjct: 120 FDYKLAWMDRLNARAKELLSYEEAVVLAGDYNCIPRDEDCYDPAAWVDDALAQPETRGKF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 ++LQ MG+T+ A + H Y+FWDY A +W K+ GIRIDH++ SP+A L S I Sbjct: 180 RELQWMGYTEGFAARDNRGHQYTFWDYQAGAWQKDNGIRIDHLLCSPQAADKLKSVSIYK 239 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 RG TKPSDH P+I ++ Sbjct: 240 DARGMTKPSDHVPIIGEFEL 259 >gi|300312415|ref|YP_003776507.1| exodeoxyribonuclease III protein [Herbaspirillum seropedicae SmR1] gi|300075200|gb|ADJ64599.1| exodeoxyribonuclease III protein [Herbaspirillum seropedicae SmR1] Length = 255 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 94/258 (36%), Positives = 143/258 (55%), Gaps = 5/258 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS++ R+ + W++EN D++CLQETK D FP + + Y +E GQK Sbjct: 1 MKIATWNVNSLKVRLPQVLKWLEENPVDVLCLQETKLTDDKFPAAEIAAAGYLVEFSGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAILS++ ++V + P + Q +R Y+P+G + S K Sbjct: 61 TYNGVAILSRHPMNDVVKNNPLFPDEQQRIIAATIEG-----VRYVCAYIPNGQSLESEK 115 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K++W+ + +Q L GDYNI P+ D ++P+ W+ + R++F Sbjct: 116 YPYKLNWLAALHEWLAQEKAKNPRLALLGDYNIAPEDRDVHDPVAWQGQVLVSEPEREAF 175 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +KLQ +G TD+ R +YS+WDY + N+G+RIDHI+LS E + ID Sbjct: 176 RKLQALGLTDSYRLFEQPEKMYSWWDYRQMGFRLNRGLRIDHILLSEELVPRCTACVIDK 235 Query: 244 KPRGWTKPSDHTPVIVSL 261 PR W +PSDH PVI +L Sbjct: 236 VPRKWEQPSDHAPVIATL 253 >gi|254413694|ref|ZP_05027463.1| exodeoxyribonuclease III [Microcoleus chthonoplastes PCC 7420] gi|196179291|gb|EDX74286.1| exodeoxyribonuclease III [Microcoleus chthonoplastes PCC 7420] Length = 264 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 94/263 (35%), Positives = 138/263 (52%), Gaps = 4/263 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSIR R ++ W+ N D++CLQETK D+ FP + L YH+ GQK Sbjct: 1 MKIATWNVNSIRTRQDHVCQWLTANPVDVLCLQETKVVDEQFPRSRFEDLGYHLYVSGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT---QTLRIGNLYLPHGNPIT 120 SYNGVA+ S+ + G + ++ + T +RI NLY+P+G + Sbjct: 61 SYNGVALFSRKPLEAVTVGFTGVLTPEEVGELDGQKRLITGILDGVRIINLYVPNGAEVG 120 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPL-IFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 S KY+ K+SW+K + LE + GD+NI P D +NP + + Sbjct: 121 SEKYEYKLSWLKLLKEYVRSLLETQPHELCICGDFNIAPDDRDIHNPKNKDKHIMASPAE 180 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 RQ+ +++ +G DA R +S+WDY +S+N+G RIDH L+P+ Sbjct: 181 RQALEEVLALGLGDAFRKFTQDGGHFSWWDYRHGGFSRNRGWRIDHHYLTPKLYEAATRC 240 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 RID +PR KPSDH PVIV + Sbjct: 241 RIDVEPRKLEKPSDHAPVIVEFE 263 >gi|325982581|ref|YP_004294983.1| exodeoxyribonuclease III Xth [Nitrosomonas sp. AL212] gi|325532100|gb|ADZ26821.1| exodeoxyribonuclease III Xth [Nitrosomonas sp. AL212] Length = 261 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 92/259 (35%), Positives = 143/259 (55%), Gaps = 5/259 (1%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 V+ +ATWNVNS++ R+ + W+ + PD++CLQE K ++NFP +++ Y GQ Sbjct: 2 VMKLATWNVNSLKVRLPQVIDWLVAHQPDVLCLQEIKLINENFPINEIKAAGYESVFAGQ 61 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K+YNGVAILSK Q IVT +PG + + LR+ Y+P+G + S Sbjct: 62 KTYNGVAILSKRQGSNIVTAIPGLADEQKRVIAATYGD-----LRVICAYVPNGENVESE 116 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 KY+ K+ W+ F ++ Q L + L GD+NI P+ D Y+ +W+ + R + Sbjct: 117 KYEYKLCWLPAFTQWLKQELIDYKRLAVLGDFNIAPEDRDVYDAELWKGKVLCSEPERSA 176 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F + N+G D+ R Y++WDY ++ +N+G+RIDHI+LS E + + ID Sbjct: 177 FGNMLNLGLADSFRLFEQPEKSYTWWDYRMLAFRRNQGLRIDHILLSEELCNACVTCAID 236 Query: 243 TKPRGWTKPSDHTPVIVSL 261 R +PSDH PV+V L Sbjct: 237 KTMRKLERPSDHAPVLVEL 255 >gi|254454283|ref|ZP_05067720.1| exodeoxyribonuclease III [Octadecabacter antarcticus 238] gi|198268689|gb|EDY92959.1| exodeoxyribonuclease III [Octadecabacter antarcticus 238] Length = 266 Score = 214 bits (545), Expect = 1e-53, Method: Composition-based stats. Identities = 119/265 (44%), Positives = 159/265 (60%), Gaps = 6/265 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+N+N ++ARI L W++ + PD+ LQE K+ D+ FP E +Q L Y +ET GQK Sbjct: 1 MKIATFNINGVKARIGALTDWLEASKPDVALLQEIKSVDEGFPREHIQDLGYTVETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT------QTLRIGNLYLPHGN 117 +NGVAILSK ++ LP + + + + +RI LYLP+GN Sbjct: 61 GFNGVAILSKLPLEDVTRGLPDPEGAGRDGEDDIEARYIEATVMGEKAIRICGLYLPNGN 120 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 P KYD K+ W+ R ASQ +ELEEP + AGDYNIIPQP D P +W +DA F Sbjct: 121 PAPGPKYDYKLHWMDRLKARASQLIELEEPFLIAGDYNIIPQPEDAARPDVWADDALFRP 180 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 + R +F++L N+G T+A RA H YSFWDY A +W KN GIRIDH +LS + LL Sbjct: 181 DSRAAFRRLLNLGLTEAFRACHQGSGHYSFWDYQAGAWDKNDGIRIDHFLLSNQCADLLK 240 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLD 262 I++ RG KPSDH PV V LD Sbjct: 241 DCWIESDVRGREKPSDHVPVWVELD 265 >gi|54027277|ref|YP_121519.1| putative exonuclease [Nocardia farcinica IFM 10152] gi|54018785|dbj|BAD60155.1| putative exonuclease [Nocardia farcinica IFM 10152] Length = 303 Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats. Identities = 76/276 (27%), Positives = 127/276 (46%), Gaps = 11/276 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSIR+R+ + W+ E++ D++ +QETK D FPFE L Y + G Sbjct: 7 LRLATWNVNSIRSRLDRVTTWLDEHDIDVLAMQETKCRDDQFPFERFAELGYEVAHLGVN 66 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQ---------ARFIEATFTINTQTLRIGNLYLP 114 +NGVAI S+ +I PG + +R+ +LY+P Sbjct: 67 QWNGVAIASRVGLADIAPAFPGQPGFDKDAADSLISAPVVESRALAATCGGVRVWSLYVP 126 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEE--PLIFAGDYNIIPQPHDCYNPIIWEND 172 +G + Y K+ W+ A+ L + + GD+NI P D ++ + Sbjct: 127 NGRALDDPHYAYKLEWLAALRASAADWLAADPAAKIALVGDWNIAPTDDDVWSVEFFAGK 186 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 + R +F + + GF D +R +Y++WDY + + +G+RID ++ SP Sbjct: 187 THTSQPERDAFAAILDTGFADVMRPFAPGPGVYTYWDYTRLRFPRKEGMRIDFVLASPAL 246 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268 + + A +D + R SDH PVI D+ + Sbjct: 247 AATVVDAGVDREARKGKGASDHAPVIAEFDLGDAPP 282 >gi|328886193|emb|CCA59432.1| Exodeoxyribonuclease III [Streptomyces venezuelae ATCC 10712] Length = 271 Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats. Identities = 77/263 (29%), Positives = 132/263 (50%), Gaps = 1/263 (0%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 ++++ +ATWNVNSI AR+ L AW++ + D++C+QETK + FP E L++L Y Sbjct: 8 LALMRIATWNVNSITARLPRLLAWLESSGTDVLCVQETKCTAEQFPTEELRALGYESVVN 67 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +NGVA++S+ ++VT LPG A +R+ ++Y+P+G + Sbjct: 68 ATGRWNGVALVSRVGLADVVTGLPGGPEYDGMDEPRAISATCGP-VRVWSVYVPNGREVA 126 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 Y K+ W++ ++ + P GDYNI P D ++ +E T R Sbjct: 127 HEHYAYKLRWLEALKAAVAEDAAGDRPFAVLGDYNIAPTDDDVWDRAAFEGLTHVTEPER 186 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + L+ G +D + H +++WDY + KN+G+RID + + + + Sbjct: 187 AALAGLREAGLSDVVPRPLKYDHPFTYWDYRQLCFPKNRGMRIDLVYGNKPFAEAVTDSY 246 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263 +D + R SDH PV+V LD+ Sbjct: 247 VDREERKGKGASDHAPVVVDLDV 269 >gi|302877385|ref|YP_003845949.1| exodeoxyribonuclease III Xth [Gallionella capsiferriformans ES-2] gi|302580174|gb|ADL54185.1| exodeoxyribonuclease III Xth [Gallionella capsiferriformans ES-2] Length = 255 Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats. Identities = 90/258 (34%), Positives = 140/258 (54%), Gaps = 5/258 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS++ R+ + W+ N D++CLQETK +D +FP L + YH GQK Sbjct: 1 MKLATWNVNSLKVRLPQVLDWLAANPVDVLCLQETKQQDADFPDTELAAAGYHTVFAGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAILS+ I++ +PG + + + +R+ ++Y+P+G S K Sbjct: 61 TYNGVAILSREAAIDVQIGIPGFEDEQKRVIAATFGD-----IRVVDVYIPNGQSPDSDK 115 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W+ + + L L+ GDYNI P+ D ++P W + + R +F Sbjct: 116 YQYKLGWLAALHDWLKEELVRYPKLVLLGDYNIAPEDRDVHDPAAWVGNVLVSPPERDAF 175 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + L +G TD+ R +S+WDY + +N G+RIDHI++S + S ID Sbjct: 176 KSLLALGLTDSYRLFEQADKTFSWWDYRMMGFRRNLGMRIDHILISAPLVAQCKSCIIDK 235 Query: 244 KPRGWTKPSDHTPVIVSL 261 PR +PSDHTPV+V L Sbjct: 236 APRKLERPSDHTPVVVEL 253 >gi|284053675|ref|ZP_06383885.1| exodeoxyribonuclease III [Arthrospira platensis str. Paraca] gi|291570470|dbj|BAI92742.1| exodeoxyribonuclease III [Arthrospira platensis NIES-39] Length = 263 Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats. Identities = 93/261 (35%), Positives = 139/261 (53%), Gaps = 3/261 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSIR R + W++ + D++CLQETK D++FP + L YH+ GQK Sbjct: 1 MKIATWNVNSIRTRQDQVLGWLQGQDIDVLCLQETKVIDQDFPRSPFEELGYHVYIYGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT---QTLRIGNLYLPHGNPIT 120 +YNGVAI S+ I+ + ++ + + I N+Y+P+G+ + Sbjct: 61 AYNGVAIFSRLNIESIIMGFTPILSADKVGDLDDQKRVIAGVIDDICIINVYIPNGSSVG 120 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 S KY+ K+ W+ R + Q L L GD+NI P+ D YNP EN + R Sbjct: 121 SDKYEYKLQWLNRLRDYLQQMLIKYPHLCICGDFNIAPEDRDIYNPQNRENHIMASAAER 180 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 Q+ + N+G D R +++WDY A S+++N+G RIDH LSP + Sbjct: 181 QALDAIANLGLADGFRKFTQDGGHFTWWDYRAASFTRNRGWRIDHHYLSPGLYENAIACY 240 Query: 241 IDTKPRGWTKPSDHTPVIVSL 261 IDT+PR KPSDH PVI+ + Sbjct: 241 IDTEPRTQPKPSDHAPVILEI 261 >gi|56751512|ref|YP_172213.1| exodeoxyribonuclease III [Synechococcus elongatus PCC 6301] gi|81301416|ref|YP_401624.1| exodeoxyribonuclease III [Synechococcus elongatus PCC 7942] gi|56686471|dbj|BAD79693.1| exodeoxyribonuclease III [Synechococcus elongatus PCC 6301] gi|81170297|gb|ABB58637.1| Exodeoxyribonuclease III [Synechococcus elongatus PCC 7942] Length = 265 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 98/262 (37%), Positives = 145/262 (55%), Gaps = 4/262 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+R+R+ +L W+ + DI+CLQETK D+ FP E LQ+L YH GQK Sbjct: 1 MRIATWNVNSVRSRLEHLQRWLTDQTLDIVCLQETKVVDEQFPLEPLQALGYHCAIAGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLP---GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 SYNGVAILS+ ++ G + + + + LRI NLY+P+G+ + Sbjct: 61 SYNGVAILSRQPLADVQIGFGAVLGAEAVGDLDEQKRVISGRSGDLRIINLYVPNGSELG 120 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EV 179 S KYD K+ W+ ++ + + E + GD+NI + D Y+P E + E Sbjct: 121 SEKYDYKLRWLTCLQQYLTVLGDRESQIHICGDFNIALEDRDIYDPAGKETHIMSSPTER 180 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 Q + ++GF DA R +S+WDY ++ +N+G RIDH LS A + + Sbjct: 181 EALRQSVLSLGFVDAFRLFEAGADQFSWWDYRTGAFRRNRGWRIDHHYLSESAKARAIAC 240 Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261 ID +PR W KPSDHTPV++ L Sbjct: 241 HIDREPRTWEKPSDHTPVVLEL 262 >gi|297563086|ref|YP_003682060.1| exodeoxyribonuclease III Xth [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296847534|gb|ADH69554.1| exodeoxyribonuclease III Xth [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 275 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 82/262 (31%), Positives = 129/262 (49%), Gaps = 3/262 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS RAR + AW+ ++ D++ +QETK D FP L Y + G Sbjct: 1 MRIATWNVNSARARAERIGAWLDRSDVDVLAIQETKARDDQFPASVLTDRGYEVAHHGLS 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT-LRIGNLYLPHGNPITST 122 +NGVAI S+ ++ PG EA T +++ +LY+P+G + Sbjct: 61 QWNGVAIASRVGLEDVRIGFPGQPGYGDPEEAEARAIGATCGGVQVWSLYVPNGREVDHP 120 Query: 123 KYDDKISWIKRFLRFASQRL--ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 Y K+ W++ + L + + + GD+NI P+ D ++ +E T R Sbjct: 121 HYAYKLRWLEALREAGAASLAADPGAQIAYVGDFNIAPRDEDVWDMAAFEGSTHVTEPER 180 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 +F KL GF + +RA +Y++WDY ++ K +G+RID ++ SP + A Sbjct: 181 VAFDKLVGAGFDEVVRAYTPGPGVYTYWDYKGLAFPKRRGMRIDFVLASPALRDRVSGAS 240 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 ID + R SDH PVIV LD Sbjct: 241 IDREERKGKGASDHAPVIVGLD 262 >gi|253997518|ref|YP_003049582.1| exodeoxyribonuclease III Xth [Methylotenera mobilis JLW8] gi|253984197|gb|ACT49055.1| exodeoxyribonuclease III Xth [Methylotenera mobilis JLW8] Length = 256 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 93/259 (35%), Positives = 141/259 (54%), Gaps = 5/259 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ R+ ++ W+ N PD++CLQETK ED FP+ L YH GQK Sbjct: 1 MKLATWNVNSLNVRLPHVLDWLTANQPDVLCLQETKQEDSKFPYAAFSELGYHAVHIGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAILS++ + + ++P + D Q +R+ Y+P+G + S K Sbjct: 61 TYNGVAILSRHPILNVQRNIPDFEDDQQRVLAADING-----VRMVCAYIPNGQAVDSDK 115 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W+ + L L GDYNI P+ DC++P WE + R++F Sbjct: 116 YQYKMRWLSALNAWLKTELTQHAKLALLGDYNIAPEDRDCHDPAAWEGQILVSPLEREAF 175 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 L ++G +D+ R +S+WDY + +N G+RIDHI++S L +A ID Sbjct: 176 NHLVSLGLSDSFRLFEQPEKSFSWWDYRMMGFRRNLGMRIDHILVSDALKVLCAAAYIDK 235 Query: 244 KPRGWTKPSDHTPVIVSLD 262 PR +PSDHTPV++ L+ Sbjct: 236 APRKLERPSDHTPVVLELN 254 >gi|329940384|ref|ZP_08289665.1| exonuclease [Streptomyces griseoaurantiacus M045] gi|329300445|gb|EGG44342.1| exonuclease [Streptomyces griseoaurantiacus M045] Length = 259 Score = 213 bits (543), Expect = 2e-53, Method: Composition-based stats. Identities = 79/260 (30%), Positives = 128/260 (49%), Gaps = 1/260 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSI AR+ L AW++ + D++C+QE KT ++ FP E L+ L Y Sbjct: 1 MRIATWNVNSITARLPRLLAWLESSGTDVLCVQEAKTTEEQFPSEALRELGYESAVHATG 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVA++S+ ++V LPGD + A +R+ ++Y+P+G + Sbjct: 61 RWNGVAVVSRVGLEDVVKGLPGDPGYEGVQEPRAVSATCGP-VRVWSVYVPNGREVDHPH 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W + + + P GDYN+ P D Y+ +E T R + Sbjct: 120 YAYKLQWFEALRAAVAGDAAGDRPFAVLGDYNVAPTDEDVYDRAAFEGSTHVTPAERAAL 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 L+ G TD + H Y++WDY + KN+G+RID + + + A +D Sbjct: 180 ASLREAGLTDVVPRPLKYDHPYTYWDYRQLCFPKNRGMRIDLVYGNEPFAKAVQDAYVDR 239 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 + R SDH PV+V L++ Sbjct: 240 EERKGKGASDHAPVVVDLEV 259 >gi|91774528|ref|YP_544284.1| exodeoxyribonuclease III [Methylobacillus flagellatus KT] gi|91708515|gb|ABE48443.1| Exodeoxyribonuclease III [Methylobacillus flagellatus KT] Length = 255 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 89/258 (34%), Positives = 135/258 (52%), Gaps = 5/258 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ R+ + WI PD++CLQETK ED FPF+ L+ Y+ GQK Sbjct: 1 MKLATWNVNSLNVRLPQVLDWIAVEKPDVLCLQETKQEDSKFPFDALKEAGYNAVHSGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAILS ++ ++ +PG + + + +RI Y+P+G + S K Sbjct: 61 TYNGVAILSPHEIEDVTYGIPGLNDEQKRLVAATIND-----IRIVCAYIPNGQSLDSDK 115 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W++ + L L GDYNI P+ D ++P+ W + R +F Sbjct: 116 YQYKLGWLEALTAYLKTELAAHPKLALLGDYNIAPEDRDVHDPVAWAGQVLVSEPERAAF 175 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + + +G D R +S+WDY + +N G+RIDHI++S S ID Sbjct: 176 RAIMALGLHDGFRLFDQEPDSFSWWDYRMAGFRRNLGLRIDHILVSEALKSECMRCWIDK 235 Query: 244 KPRGWTKPSDHTPVIVSL 261 PR +PSDHTPV++ L Sbjct: 236 GPRKLERPSDHTPVVLQL 253 >gi|170692673|ref|ZP_02883835.1| exodeoxyribonuclease III Xth [Burkholderia graminis C4D1M] gi|170142329|gb|EDT10495.1| exodeoxyribonuclease III Xth [Burkholderia graminis C4D1M] Length = 268 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 104/271 (38%), Positives = 152/271 (56%), Gaps = 5/271 (1%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 M+ + +AT+N+N IR+R L W++ PDI+CLQE K D FP + ++ YH Sbjct: 1 MATLRIATFNINGIRSRQTALLQWLEREAPDIVCLQELKAADSAFPADAVRDAGYHAIWH 60 Query: 61 GQKSYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 GQ ++NGVAILSK P+E LPG + D +R++E L + LYLP+GNP Sbjct: 61 GQSAWNGVAILSKGEAPLESRRGLPGFEADTHSRYLEVAVDG----LLVCCLYLPNGNPQ 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K++ K+ W + A+ L+ P++ AGD+N++P D YNP W DA E Sbjct: 117 PGPKFEYKLKWFDHLIDHAANLLKSGHPVVLAGDFNVVPTDEDIYNPRSWLKDALLQPES 176 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R+ +++L G+TD++R +Y+FWDY+ W N G+RIDHI+LSP+ L A Sbjct: 177 RERYRRLLAQGWTDSLRTHFGDERVYTFWDYFRRHWDTNSGLRIDHILLSPDLAPRLRDA 236 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQ 270 +D RG SDH P V LD+ R+K Sbjct: 237 GVDRWVRGEPHASDHAPTWVELDMSARRRKT 267 >gi|197103425|ref|YP_002128803.1| exodeoxyribonuclease III [Phenylobacterium zucineum HLK1] gi|196480701|gb|ACG80228.1| exodeoxyribonuclease III [Phenylobacterium zucineum HLK1] Length = 262 Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats. Identities = 105/260 (40%), Positives = 163/260 (62%), Gaps = 5/260 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+NVN + R+ L W++E PD++CLQE K + FP E ++ Y GQK Sbjct: 1 MRIATFNVNGVNGRLPVLLRWLEETRPDVVCLQELKAPQERFPAEAIERAGYGAIWAGQK 60 Query: 64 SYNGVAILSKY-QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 S+NGVA+L++ +P+EI LPGD D+Q+R++EA + + LY P+GNP Sbjct: 61 SWNGVAMLARGAEPVEIRRGLPGDTEDLQSRYLEAAVEG----VLVACLYAPNGNPAPGP 116 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K+D K++W+ R R A++ ++ P + AGD+NIIP D Y P W +DA F E R + Sbjct: 117 KFDYKLAWLARLNRRAAELVKTCTPAVLAGDFNIIPTELDAYKPERWVDDALFRPESRAA 176 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F+ L + G+ DA+R+ H +++FWDY+ +++ ++ G+RIDH++LSP +S L +A +D Sbjct: 177 FEALLDQGWRDALRSLHPAERIFTFWDYFRNAFPRDAGLRIDHLLLSPTLSSRLVAAGVD 236 Query: 243 TKPRGWTKPSDHTPVIVSLD 262 RGW K SDH PV V L+ Sbjct: 237 RHVRGWAKTSDHAPVWVELE 256 >gi|329850335|ref|ZP_08265180.1| exodeoxyribonuclease III [Asticcacaulis biprosthecum C19] gi|328840650|gb|EGF90221.1| exodeoxyribonuclease III [Asticcacaulis biprosthecum C19] Length = 262 Score = 213 bits (541), Expect = 3e-53, Method: Composition-based stats. Identities = 119/262 (45%), Positives = 163/262 (62%), Gaps = 5/262 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ AR+ L W +E PD+ LQE K D+ FP E +SL Y+ GQK Sbjct: 1 MKLATWNVNSVNARLPLLLEWFREAAPDVCALQEIKCIDEKFPIEAFESLGYNCAVFGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 ++NGVAILSK+ ++ LPGDD D Q+R+IEA Q +R +YLP+GNP+ + K Sbjct: 61 TWNGVAILSKFPLSDVTKGLPGDDSDEQSRYIEALVEAP-QPVRFVGIYLPNGNPLGTDK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W++R A+Q L LEE I GD+NIIP DC+ +W +DA + VRQ++ Sbjct: 120 FAYKLRWLERLHARAAQLLTLEEATIITGDFNIIPTKADCWKESVWLDDALYQPAVRQAY 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q L+N+G+TDA + Y+FWDY A +W KN+GIRIDH +LSP+A L+ I Sbjct: 180 QGLKNLGYTDAFDVMPPEGNRYTFWDYQAGAWQKNEGIRIDHHLLSPQAADRLNGLVIHK 239 Query: 244 KPRGWT----KPSDHTPVIVSL 261 RG T KPSDH PV + L Sbjct: 240 DTRGRTHDEAKPSDHVPVEIEL 261 >gi|37526441|ref|NP_929785.1| exonuclease III [Photorhabdus luminescens subsp. laumondii TTO1] gi|36785872|emb|CAE14923.1| Exodeoxyribonuclease III (exonuclease III) (EXO III) (AP endonuclease VI) [Photorhabdus luminescens subsp. laumondii TTO1] Length = 268 Score = 213 bits (541), Expect = 3e-53, Method: Composition-based stats. Identities = 86/268 (32%), Positives = 129/268 (48%), Gaps = 8/268 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H LAA I+++ PD+I LQETK D+ FP E + L YH+ GQK Sbjct: 1 MKFISFNINGLRARPHQLAAIIEQHQPDVIGLQETKVHDEAFPLEEVGKLGYHVFYYGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122 ++ GVA+L++ P+ + PGDD + Q R I A L + N Y P G Sbjct: 61 AHYGVALLTRQVPLAVYRGFPGDDEEAQRRVIMAEVETPHGLLTVINGYFPQGENREHPV 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE------NDACFT 176 K+ K + + + Q L + +I GD NI P D + F Sbjct: 121 KFPAKEKFYQDLQNYLEQNLTPQSHVIIMGDMNISPTDLDIGIGENNQKRWLKTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R +L+N G D R + + +S++DY + + N+G+RID ++ S Sbjct: 181 PEERDWMDRLKNWGLVDTFRHLNPECNDQFSWFDYRSKGFDDNRGLRIDLLLASKPLMDR 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + ID K R KPSDH PV +I Sbjct: 241 CIATGIDYKIREMEKPSDHAPVWAEFEI 268 >gi|264679401|ref|YP_003279308.1| exodeoxyribonuclease III Xth [Comamonas testosteroni CNB-2] gi|262209914|gb|ACY34012.1| exodeoxyribonuclease III Xth [Comamonas testosteroni CNB-2] Length = 260 Score = 213 bits (541), Expect = 3e-53, Method: Composition-based stats. Identities = 91/260 (35%), Positives = 142/260 (54%), Gaps = 1/260 (0%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +ATWNVNS+ R+ + W+ N D + LQE K D FP + Y + GQ Sbjct: 2 TMKIATWNVNSLSVRLPQVLDWLAANPVDALGLQELKLTDDKFPHMAFEEAGYKAVSHGQ 61 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K+YNGVA +++ ++V ++PG D D QAR I T +R+ N Y +G S Sbjct: 62 KTYNGVAWITRDTGRDVVRNIPGLD-DEQARIIATTIDSPNGEIRLINGYFVNGQEPGSE 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K+ K+ W++ + ++ L L+ GD+N+ P+ D Y+P+ ++ T+E R Sbjct: 121 KFAYKMRWLQALHDWIQNQMTLHPRLVLVGDFNVAPEDRDSYDPVGLKDTIHHTVEERDH 180 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 FQ+L +G +DA R YS+WDY + KN+G+RIDHI++S S + + +D Sbjct: 181 FQRLLQLGLSDAFRMFEQPEKSYSWWDYRMLGFQKNRGLRIDHILVSEALKSKVSACSVD 240 Query: 243 TKPRGWTKPSDHTPVIVSLD 262 PR +PSDH PV+V+LD Sbjct: 241 RAPRKNKQPSDHAPVVVTLD 260 >gi|54296672|ref|YP_123041.1| hypothetical protein lpp0703 [Legionella pneumophila str. Paris] gi|53750457|emb|CAH11851.1| hypothetical protein lpp0703 [Legionella pneumophila str. Paris] Length = 256 Score = 213 bits (541), Expect = 3e-53, Method: Composition-based stats. Identities = 91/261 (34%), Positives = 151/261 (57%), Gaps = 5/261 (1%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +A+WNVNS++ R+ + W++ + D++ +QETK D+NFP + YH+ GQ Sbjct: 1 MFKLASWNVNSLKVRLEQVLQWLESSQVDLLAMQETKLTDENFPVASFTDKGYHVIFSGQ 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K+YNGVAI+S+Y +I T +P + + +R+ NLY+P+G +TS Sbjct: 61 KTYNGVAIISRYPMTDIQTDIPELEDPQRRILAATVKG-----IRLINLYVPNGGELTSD 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 KY K+ W+ + RF +L + + GD+NI P+ D ++P+ WE + RQ+ Sbjct: 116 KYQYKLDWLNKVTRFIENQLSIYSKVAVVGDFNIAPEDRDVHDPVEWEGCVLVSPAERQA 175 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F K+ +G D+ R +S+WDY A ++ +N+G+RIDH++LS E +L ++ID Sbjct: 176 FMKILELGLHDSFRNFAQEEKAFSWWDYRAAAFRRNRGLRIDHVLLSHELNALCRQSKID 235 Query: 243 TKPRGWTKPSDHTPVIVSLDI 263 +PR +PSDH PV V L++ Sbjct: 236 KEPRKAERPSDHAPVWVELEL 256 >gi|307726281|ref|YP_003909494.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1003] gi|307586806|gb|ADN60203.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1003] Length = 269 Score = 213 bits (541), Expect = 3e-53, Method: Composition-based stats. Identities = 108/271 (39%), Positives = 154/271 (56%), Gaps = 5/271 (1%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 M+ + +AT+N+N IR+R L W++ PDI+CLQE K D FP + L+ +YH Sbjct: 1 MATLRIATFNINGIRSRQAALVQWLEREAPDIVCLQELKAADSAFPADALRDADYHAIWH 60 Query: 61 GQKSYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 GQ ++NGVAILSK P+E LPG + D +R++EA L + LYLP+GNP Sbjct: 61 GQSAWNGVAILSKGEAPLESRRGLPGFEADTHSRYLEAAVGG----LLVCCLYLPNGNPQ 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K++ K+ W + A+ L+ P++ AGD+N++P D YNP W DA E Sbjct: 117 PGPKFEYKLKWFDHLIEHAANLLKSGHPVVLAGDFNVVPTDEDIYNPRSWLKDALLQPES 176 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R+ +Q+L G+TD++R +Y+FWDY+ W N G+RIDHI+LSPE L A Sbjct: 177 RERYQRLLAQGWTDSLRKHFGDERVYTFWDYFRRHWDTNSGLRIDHILLSPELAPRLRDA 236 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQ 270 +D RG SDH P V LD+ R+K Sbjct: 237 GVDRWVRGEAHASDHAPTWVELDMSARRRKT 267 >gi|241765066|ref|ZP_04763058.1| exodeoxyribonuclease III Xth [Acidovorax delafieldii 2AN] gi|241365303|gb|EER60125.1| exodeoxyribonuclease III Xth [Acidovorax delafieldii 2AN] Length = 258 Score = 213 bits (541), Expect = 3e-53, Method: Composition-based stats. Identities = 96/259 (37%), Positives = 135/259 (52%), Gaps = 1/259 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+NS+ R+ + AW+ N D +CLQE K D FPF LQ YH GQK Sbjct: 1 MQLATWNINSLSVRLPQVVAWLAANPVDALCLQELKLTDDKFPFAALQEAGYHAVAMGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAILS+ ++V ++PG D AT T +R+ N Y +G S K Sbjct: 61 TYNGVAILSRSPLRDVVRNIPGHDDQQARVI-AATMDTATGPVRLVNCYFVNGQEPGSEK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W++ + L L GD+N+ P+ D Y+P+ T E R F Sbjct: 120 FAYKMRWLQALHDWLRTELAAHPRLALLGDFNVAPEDRDSYDPVGLRETIHHTTEERAHF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q L +G TDA R YS+WDY + KN+G+RIDHI++S + + ID Sbjct: 180 QALLALGLTDAYRMFEQPEKAYSWWDYRMLGFQKNRGLRIDHILVSEALRGTVKACTIDR 239 Query: 244 KPRGWTKPSDHTPVIVSLD 262 PR +PSDH PV+ +LD Sbjct: 240 APRKNPQPSDHAPVVATLD 258 >gi|163857201|ref|YP_001631499.1| putative exodeoxyribonuclease III [Bordetella petrii DSM 12804] gi|163260929|emb|CAP43231.1| putative exodeoxyribonuclease III [Bordetella petrii] Length = 260 Score = 213 bits (541), Expect = 3e-53, Method: Composition-based stats. Identities = 93/260 (35%), Positives = 142/260 (54%), Gaps = 1/260 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS++ R+ + W+ N D +CLQE K D+NFP + L YH GQK Sbjct: 1 MKLATWNVNSLKVRLPQVLDWLAANPVDALCLQELKLTDENFPLDAFTQLGYHAAWAGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAILS+ +V ++PG D D Q R + T +R+ + Y P+G + S K Sbjct: 61 TYNGVAILSREPGAAMVRNIPGMD-DPQQRLLAVTLPSPAGDVRVISAYCPNGQALESDK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K++W ++ + +Q ++ L GDYN+ P D +NP WE + R +F Sbjct: 120 YAYKLNWFQQLRDWLAQEIQTYPRLALLGDYNVAPADEDVHNPAKWEGQVLVSEPERAAF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + L ++G D+ R +S+WDY ++ +N G+RIDHI+LS + ID Sbjct: 180 RALLDLGLADSFRLFEQPEKSFSWWDYRQFAFRRNAGLRIDHILLSQPLVPHCVACVIDK 239 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 PR +PSDH PV+ +L + Sbjct: 240 APRANEQPSDHAPVVATLQL 259 >gi|113477060|ref|YP_723121.1| exodeoxyribonuclease III [Trichodesmium erythraeum IMS101] gi|110168108|gb|ABG52648.1| Exodeoxyribonuclease III [Trichodesmium erythraeum IMS101] Length = 261 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 102/261 (39%), Positives = 138/261 (52%), Gaps = 3/261 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSIR R + W+K N+ DI+CLQETK D++FP L YHI GQK Sbjct: 1 MKIATWNVNSIRTRKQQVIEWLKANSVDILCLQETKVIDQDFPRSPFAELGYHIYVSGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLP---GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 SYNGVAI S+ +I + GD + T +RI NLY+P+G+ + Sbjct: 61 SYNGVAIFSRSPMEDISSGFAPILGDHKVGDFDIQKRLITGVINDVRILNLYVPNGSSVG 120 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 S KYD K+ W+K + L+ L GD+NI+P+ D Y+P +N + R Sbjct: 121 SEKYDYKLDWLKLLQEYVKIILDKSPNLCICGDFNIVPEDRDIYDPEGCKNSVGLSDLER 180 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 Q+ Q++ +G DA R YS+WDY A + +N+G RIDH LS + Sbjct: 181 QALQEILKLGLVDAFRQFTTEGGHYSWWDYRAAGFRRNRGWRIDHHYLSLPLSQKATMCV 240 Query: 241 IDTKPRGWTKPSDHTPVIVSL 261 ID PR KPSDH PVIV Sbjct: 241 IDKNPRELLKPSDHAPVIVEF 261 >gi|282864972|ref|ZP_06274026.1| exodeoxyribonuclease III Xth [Streptomyces sp. ACTE] gi|282560397|gb|EFB65945.1| exodeoxyribonuclease III Xth [Streptomyces sp. ACTE] Length = 259 Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats. Identities = 77/260 (29%), Positives = 128/260 (49%), Gaps = 1/260 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSI AR+ L AW++ + D++CLQETK + FP E L+ Y Sbjct: 1 MRIATWNVNSITARLPRLLAWLESSGTDVLCLQETKCTLEQFPAEALREAGYESAVNATG 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGV +LS+ ++VT LP + A +R+ ++Y+P+G + Sbjct: 61 RWNGVGLLSRVGLTDVVTGLPDGPEYEGVQEPRAVSAACGP-VRVWSVYVPNGREVAHDH 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W++ + + P GD+NI P D ++P ++E T R + Sbjct: 120 YAYKLRWLEALRKAVAADAAGPVPFAVLGDFNIAPTDDDVWDPSLFEGATHVTPAERDAL 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 L+ G +D + H Y++WDY + KN+G+RID + + + + + +D Sbjct: 180 AALRAGGLSDVVPRPLKYDHPYTYWDYRQLGFPKNRGMRIDLVYGNAPFAAAVQDSYVDR 239 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 + R SDH PV+V LD+ Sbjct: 240 EERKGKGASDHAPVVVDLDV 259 >gi|298370009|ref|ZP_06981325.1| exodeoxyribonuclease III [Neisseria sp. oral taxon 014 str. F0314] gi|298281469|gb|EFI22958.1| exodeoxyribonuclease III [Neisseria sp. oral taxon 014 str. F0314] Length = 256 Score = 212 bits (540), Expect = 4e-53, Method: Composition-based stats. Identities = 89/260 (34%), Positives = 138/260 (53%), Gaps = 4/260 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + TWNVNS+ R+ + W+ ++ PDI+ LQE K + FP LQ + +H GQK Sbjct: 1 MKITTWNVNSLNVRLPQVQNWLADHQPDILVLQELKLDQDKFPAAALQMMGWHSVWSGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAI+S+ +P ++ T LP D Q R I AT +R+ N+Y +G S K Sbjct: 61 TYNGVAIISRSEPQDVHTGLPAMPDDPQRRVIAATIGG----VRVINVYCVNGEAPDSPK 116 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K W F + E L+ GD+NI P DCY+ W T R F Sbjct: 117 FQYKQQWFAALTEFVRDEMARYEKLVLLGDFNIAPTDDDCYDAEKWRGKILCTDSERGWF 176 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + L ++G TD++R H Y+++DY + + G+RIDH+++SP +++L ++D+ Sbjct: 177 KNLLDLGLTDSLRKIHPEGAFYTWFDYRGAMFQRGLGLRIDHLLVSPALSAVLKDVQVDS 236 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 R +PSDH PV D+ Sbjct: 237 DARAQERPSDHAPVWAEFDL 256 >gi|17232798|ref|NP_489346.1| exodeoxyribonuclease III [Nostoc sp. PCC 7120] gi|17134445|dbj|BAB77005.1| exodeoxyribonuclease III [Nostoc sp. PCC 7120] Length = 260 Score = 212 bits (540), Expect = 4e-53, Method: Composition-based stats. Identities = 98/260 (37%), Positives = 146/260 (56%), Gaps = 2/260 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSIR R+ + W+K+N D++CLQETK D +FP ++L YH GQK Sbjct: 1 MKIATWNVNSIRTRLEQVLDWLKQNPVDVLCLQETKVIDDDFPRSPFENLGYHSYISGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT--LRIGNLYLPHGNPITS 121 +YNGVA++S+ ++ T D++ + E I +RI NLY+P+G+ I S Sbjct: 61 AYNGVALISQQPLTDVTTGFTPILPDIEPIWDEQKRVITGVIDGVRIVNLYVPNGSAIAS 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 KY+ K+ W+ + L L+ + GD+NI + D + + EN +L RQ Sbjct: 121 EKYEYKLRWLTVLREYLRSLLLLQPAICICGDFNIALEDKDIHEKVKAENHIMASLAERQ 180 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 + + + +GF DA R +S+WDY A S+ +N+G RIDH L+P + S I Sbjct: 181 ALRDVLELGFADAFRKFTTEGGHFSWWDYRAASFRRNQGWRIDHHYLTPVLYAQAKSCTI 240 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 D PR T+PSDHTPVIV + Sbjct: 241 DVSPRKLTQPSDHTPVIVEI 260 >gi|76810233|ref|YP_334150.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1710b] gi|76579686|gb|ABA49161.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1710b] Length = 322 Score = 212 bits (540), Expect = 4e-53, Method: Composition-based stats. Identities = 87/258 (33%), Positives = 134/258 (51%), Gaps = 1/258 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ R ++ W+ +++ D++CLQE K D+ FP E L++ Y GQK Sbjct: 65 MRIATWNVNSLNVRKQHVLDWLAQSDVDVLCLQELKIPDEKFPREALEAAGYRSWFAGQK 124 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAIL++ T + + + +RI + Y P+G + S K Sbjct: 125 TYNGVAILARASLPFDETDIVRNIPGFEDAQQRLIAATIDG-VRIVSAYFPNGQALDSDK 183 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W+ + L+ L GDYNI P+ D ++P WE + + R F Sbjct: 184 FVYKMQWLDALQAWLKDELQRYPKLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHF 243 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +L +GF DA R +++WDY ++ +N G+RIDHI+LSP S +D Sbjct: 244 AQLVALGFVDAFRRFEQPEKTFTWWDYRMLAFRRNAGLRIDHILLSPALAETCTSCTVDR 303 Query: 244 KPRGWTKPSDHTPVIVSL 261 PR W +PSDHTPV+ L Sbjct: 304 VPRTWEQPSDHTPVVAQL 321 >gi|300868692|ref|ZP_07113303.1| exodeoxyribonuclease III [Oscillatoria sp. PCC 6506] gi|300333253|emb|CBN58495.1| exodeoxyribonuclease III [Oscillatoria sp. PCC 6506] Length = 261 Score = 212 bits (540), Expect = 4e-53, Method: Composition-based stats. Identities = 96/261 (36%), Positives = 141/261 (54%), Gaps = 3/261 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSIR+R+ + W++ N D++CLQETK D++FP + + Y+ GQK Sbjct: 1 MKIATWNVNSIRSRLEQVLEWLQANPVDVLCLQETKVIDQDFPLQPFLDIGYNFYISGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ---TLRIGNLYLPHGNPIT 120 SYNGVAI S+ +I T + + T +RI NLY+P+G+ + Sbjct: 61 SYNGVAIFSRLPMTDISTGFAPILGTDIVGEFDEQKRLITGIIADIRIVNLYIPNGSEVG 120 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 S KY+ K++W+K + ++ L GD+NI P D +NP ++N + R Sbjct: 121 SEKYNYKLNWLKLLQEYLKIIIDKSPNLCVCGDFNIAPDDRDIHNPKAFKNQIMASPAER 180 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 Q+ Q++ +GF+DA R D +S+WDY + N+G RIDH LS S Sbjct: 181 QALQEIVALGFSDAFRIFTDEGGHFSWWDYRTGGFRHNRGWRIDHHYLSLSLCDRAKSCT 240 Query: 241 IDTKPRGWTKPSDHTPVIVSL 261 ID PR TKPSDH PVIV + Sbjct: 241 IDKTPRQLTKPSDHAPVIVEI 261 >gi|150376441|ref|YP_001313037.1| exodeoxyribonuclease III Xth [Sinorhizobium medicae WSM419] gi|150030988|gb|ABR63104.1| exodeoxyribonuclease III Xth [Sinorhizobium medicae WSM419] Length = 257 Score = 212 bits (539), Expect = 4e-53, Method: Composition-based stats. Identities = 98/259 (37%), Positives = 151/259 (58%), Gaps = 5/259 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+N+N + R+ +L W+ PD++CLQE K D FP +++ Y GQ Sbjct: 1 MKIATFNINGVNKRLDHLLIWLAAAGPDVVCLQELKATDGQFPEAAIEAAGYGAVWLGQT 60 Query: 64 SYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 ++NGVAIL++ +P+ T LPGD D Q+R+IEA + I +LY P+GNP Sbjct: 61 AWNGVAILARGCEPVLTRTGLPGDPSDTQSRYIEAAVNG----ILIASLYAPNGNPQPGP 116 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K+D K++W +R A+ LE P++ AGDYN++P+P D Y ++ +A E R + Sbjct: 117 KFDYKLAWHQRLNLHAAALLEARVPVLLAGDYNVVPEPRDIYPTRSYDGNALVQPESRAA 176 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F+ L G+ DA+R H L++FWDY + W ++ G+R+DHI+LS + L A ID Sbjct: 177 FKSLVEQGWLDALRKVHPQAQLFTFWDYRRNRWQRDAGLRLDHILLSGKLKRRLTGAGID 236 Query: 243 TKPRGWTKPSDHTPVIVSL 261 + RG SDH PV ++L Sbjct: 237 REIRGLEGASDHAPVWITL 255 >gi|237745581|ref|ZP_04576061.1| exodeoxyribonuclease III [Oxalobacter formigenes HOxBLS] gi|229376932|gb|EEO27023.1| exodeoxyribonuclease III [Oxalobacter formigenes HOxBLS] Length = 255 Score = 212 bits (539), Expect = 5e-53, Method: Composition-based stats. Identities = 95/260 (36%), Positives = 141/260 (54%), Gaps = 5/260 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS++ R+ + W+ +N D++CLQETK D FP + + Y GQK Sbjct: 1 MKIATWNVNSLKVRLPQVLQWLNDNPVDVLCLQETKLTDDKFPVMEIAAAGYQTVFTGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAILS+ +I+ + P + Q T LR+ Y+P+G + S K Sbjct: 61 TYNGVAILSRQSAGDILKNNPFFPDEQQRIV-----TGTFGKLRVVCAYVPNGQAVDSDK 115 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y KI W+K + + + L GDYNI P+ D Y+P WE + + R +F Sbjct: 116 YRYKIEWLKALHAWLLEEKKKYPYLALLGDYNIAPEDRDVYDPAAWEGNVLVSEPERAAF 175 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + L ++GF DA R YS+WDY ++ +N+G+R+DHI+LS + ID Sbjct: 176 RALLDIGFVDAFRLFSQPEKTYSWWDYRQLAFPRNRGLRLDHILLSENLAPHCTACTIDR 235 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 PR W +PSDHTPVI L++ Sbjct: 236 MPRKWKQPSDHTPVIAELEL 255 >gi|167581292|ref|ZP_02374166.1| exodeoxyribonuclease III [Burkholderia thailandensis TXDOH] Length = 258 Score = 212 bits (539), Expect = 5e-53, Method: Composition-based stats. Identities = 87/258 (33%), Positives = 134/258 (51%), Gaps = 1/258 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ R ++ W+ +++ D++CLQE K D+ FP E L++ Y GQK Sbjct: 1 MRIATWNVNSLNVRKQHVLDWLAQSDVDVLCLQELKIPDEKFPREALEAAGYRSWFAGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAIL++ T + + + +RI + Y P+G + S K Sbjct: 61 TYNGVAILARASLPFDETDVVRNIPGFEDTQQRLIAATIDG-VRIVSAYFPNGQALDSDK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W+ + L+ L GDYNI P+ D ++P WE + + R F Sbjct: 120 FVYKMQWLDALQAWLKNELQRYPKLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +L +GF DA R +++WDY ++ +N G+RIDHI+LSP S +D Sbjct: 180 AQLVALGFVDAFRRFDQPEKTFTWWDYRMLAFRRNAGLRIDHILLSPALAETCTSCTVDR 239 Query: 244 KPRGWTKPSDHTPVIVSL 261 PR W +PSDHTPV+ L Sbjct: 240 APRAWEQPSDHTPVVAQL 257 >gi|294815857|ref|ZP_06774500.1| Exonuclease [Streptomyces clavuligerus ATCC 27064] gi|294328456|gb|EFG10099.1| Exonuclease [Streptomyces clavuligerus ATCC 27064] Length = 269 Score = 212 bits (539), Expect = 5e-53, Method: Composition-based stats. Identities = 78/263 (29%), Positives = 130/263 (49%), Gaps = 1/263 (0%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 +S + +ATWNVNS+ AR+ L AW++ + D++C+QETK ++ FP E L+ + Y Sbjct: 8 LSSMRIATWNVNSVTARLPRLLAWLESSGTDVLCIQETKCAEEQFPAEELREIGYESAIH 67 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +NGVA++S+ E+V LPG A+ A +R+ ++Y+P+G +T Sbjct: 68 ADGRWNGVALVSRVGLDEVVKGLPGGPAYDGAQEPRAISATCGP-VRLWSVYVPNGREVT 126 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 Y K+ W+ + P GDYNI P D ++ +E T R Sbjct: 127 HDHYAYKLEWLAALKEAVAADAAGPRPFAVLGDYNIAPADEDVWDRAAFEGSTHVTEPER 186 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + L+ G +D + H +++WDY + KN+G+RID + + + + Sbjct: 187 AALAALRETGLSDVVPRPLKYDHPFTYWDYRQLCFPKNRGMRIDLVYGNGPFAGAVKDSY 246 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263 +D + R SDH PV+V LD+ Sbjct: 247 VDREERKGKGASDHAPVVVDLDV 269 >gi|83718841|ref|YP_442378.1| exodeoxyribonuclease III [Burkholderia thailandensis E264] gi|167619376|ref|ZP_02388007.1| exodeoxyribonuclease III [Burkholderia thailandensis Bt4] gi|257138580|ref|ZP_05586842.1| exodeoxyribonuclease III [Burkholderia thailandensis E264] gi|83652666|gb|ABC36729.1| exodeoxyribonuclease III [Burkholderia thailandensis E264] Length = 258 Score = 212 bits (539), Expect = 5e-53, Method: Composition-based stats. Identities = 87/258 (33%), Positives = 134/258 (51%), Gaps = 1/258 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ R ++ W+ +++ D++CLQE K D+ FP E L++ Y GQK Sbjct: 1 MRIATWNVNSLNVRKQHVLDWLAQSDVDVLCLQELKIPDEKFPREALEAAGYRSWFAGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAIL++ T + + + +RI + Y P+G + S K Sbjct: 61 TYNGVAILARASLPFDETDVVRNIPGFEDTQQRLIAATIDG-VRIVSAYFPNGQALDSDK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W+ + L+ L GDYNI P+ D ++P WE + + R F Sbjct: 120 FVYKMQWLDALQAWLKNELQRYPKLALLGDYNIAPEDRDVHDPSKWEGQNLVSPQERAHF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +L +GF DA R +++WDY ++ +N G+RIDHI+LSP S +D Sbjct: 180 AQLVALGFVDAFRRFDQPEKTFTWWDYRMLAFRRNAGLRIDHILLSPALAETCTSCTVDR 239 Query: 244 KPRGWTKPSDHTPVIVSL 261 PR W +PSDHTPV+ L Sbjct: 240 APRAWEQPSDHTPVVAQL 257 >gi|87198182|ref|YP_495439.1| exodeoxyribonuclease III [Novosphingobium aromaticivorans DSM 12444] gi|87133863|gb|ABD24605.1| Exodeoxyribonuclease III [Novosphingobium aromaticivorans DSM 12444] Length = 259 Score = 212 bits (539), Expect = 5e-53, Method: Composition-based stats. Identities = 102/260 (39%), Positives = 152/260 (58%), Gaps = 5/260 (1%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + VA++N+N I+AR+ L W++E P + CLQE KT+D+ FP E + + Y GQ Sbjct: 2 TLKVASFNINGIKARLPRLLEWLEETRPSVACLQEIKTQDEGFPAEEFEKIGYRAIWHGQ 61 Query: 63 KSYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 K +NGVAIL+ QP+E+ L GD D +R++EA LR+ +YLP+GNP Sbjct: 62 KGFNGVAILADGEQPVEVQRGLAGDPEDEHSRYLEADV----FGLRVVCIYLPNGNPQPG 117 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 K+D K+ W++R + E P + GDYN+IP+ D ++ +DA E R Sbjct: 118 PKFDYKLRWMERLRARMADIASEEVPALVIGDYNVIPEDKDTFSVKAMASDALMQPESRD 177 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 ++++L N G+TDAI + +++FWDY A +W ++ G RIDH +LSPE L +A + Sbjct: 178 AYRRLLNDGWTDAIDLFNPQGGVWTFWDYQAGAWQRDHGFRIDHALLSPELADRLVAAGV 237 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 D RG K SDH PV V+L Sbjct: 238 DKDYRGREKASDHAPVWVTL 257 >gi|52840886|ref|YP_094685.1| hypothetical protein lpg0649 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52627997|gb|AAU26738.1| exodeoxyribonuclease III [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 263 Score = 212 bits (539), Expect = 5e-53, Method: Composition-based stats. Identities = 92/261 (35%), Positives = 149/261 (57%), Gaps = 5/261 (1%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 V +A+WNVNS++ R+ + W++ + D++ +QETK D NFP + YH+ GQ Sbjct: 8 VFKLASWNVNSLKVRLEQVLQWLESSQVDVLAMQETKLTDDNFPVASFIDKGYHVIFSGQ 67 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K+YNGVAI+S+Y +I T +P + + +R+ NLY+P+G +TS Sbjct: 68 KTYNGVAIISRYPMTDIQTDIPELEDPQRRILAATVKG-----IRLINLYVPNGGELTSD 122 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 KY K+ W+ + RF + + + GD+NI P+ D Y+P+ WE + RQ+ Sbjct: 123 KYQYKLDWLNKVTRFIQHEISIYSKVAVVGDFNIAPEDRDVYDPVEWEGCVLVSPPERQA 182 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F K+ +G D+ R +S+WDY A ++ +N+G+RIDH++LS E +L ++ID Sbjct: 183 FMKILELGLHDSFRNFAQEEKAFSWWDYRAAAFRRNRGLRIDHVLLSHELNALCRQSKID 242 Query: 243 TKPRGWTKPSDHTPVIVSLDI 263 +PR +PSDH PV V L++ Sbjct: 243 KEPRKAERPSDHAPVWVELEL 263 >gi|297190955|ref|ZP_06908353.1| exonuclease [Streptomyces pristinaespiralis ATCC 25486] gi|197721867|gb|EDY65775.1| exonuclease [Streptomyces pristinaespiralis ATCC 25486] Length = 259 Score = 212 bits (539), Expect = 5e-53, Method: Composition-based stats. Identities = 76/260 (29%), Positives = 129/260 (49%), Gaps = 1/260 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSI AR+ L AW++ + D++CLQETK ++ FP L+ L Y Sbjct: 1 MRIATWNVNSITARLPRLLAWLESSGTDVLCLQETKCTEEQFPAAQLRELGYESAVNASG 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVA++S+ ++V LPG + A +R+ ++Y+P+G + Sbjct: 61 RWNGVAVISRVGLDDVVRGLPGAPDYEGVQEPRAISATCGP-VRVWSVYVPNGREVAHDH 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W++ + P GD+NI P D ++P ++ T R + Sbjct: 120 YGYKLRWLEALSVAVTDDAAAGRPFAVLGDFNIAPTDDDVWDPSFFDGMTHVTPPERAAL 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + L+ G D + H +++WDY + KN+G+RID + + T+ + + +D Sbjct: 180 EALRKRGLADVVPRPLKYEHPFTYWDYRQLCFPKNRGMRIDLVYGNEPFTAAVKDSFVDR 239 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 + R SDH PV+V LD+ Sbjct: 240 EERKGKGASDHAPVVVDLDM 259 >gi|329911665|ref|ZP_08275588.1| Exodeoxyribonuclease III [Oxalobacteraceae bacterium IMCC9480] gi|327545815|gb|EGF30936.1| Exodeoxyribonuclease III [Oxalobacteraceae bacterium IMCC9480] Length = 256 Score = 212 bits (539), Expect = 6e-53, Method: Composition-based stats. Identities = 91/260 (35%), Positives = 141/260 (54%), Gaps = 5/260 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS++ R+ + W+ +N D++CLQETKT D+ FP +++ YH+ GQK Sbjct: 1 MKLATWNVNSLKVRLPQVLQWLADNPIDVLCLQETKTIDEKFPQAEIEAAGYHVAFSGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAILSK ++V + P + Q +R+ Y+P+G S K Sbjct: 61 TYNGVAILSKQPMTDVVRNNPHFADEQQRLIAATIDG-----VRVICAYIPNGQAPDSDK 115 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W+ ++ + + GDYNI P+ D ++P W + R +F Sbjct: 116 YQYKLRWLDGLQQWLALEMAAHPKFALLGDYNIAPEDRDVHDPAAWVGQILVSEPERAAF 175 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q++ + TDA R L+S+WDY + +N G+RIDHI+LS E + S ID Sbjct: 176 QRMIALELTDAFRLFEQADKLFSWWDYRQMGFRRNAGMRIDHILLSKELAAACTSCVIDK 235 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 PR W +PSDHTPV+ ++ + Sbjct: 236 VPRKWEQPSDHTPVVATIAL 255 >gi|296161285|ref|ZP_06844093.1| exodeoxyribonuclease III Xth [Burkholderia sp. Ch1-1] gi|295888443|gb|EFG68253.1| exodeoxyribonuclease III Xth [Burkholderia sp. Ch1-1] Length = 270 Score = 212 bits (539), Expect = 6e-53, Method: Composition-based stats. Identities = 103/272 (37%), Positives = 155/272 (56%), Gaps = 5/272 (1%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 M+ + +AT+N+N IR+R+ L W++ PDI+CLQE K D FP E L+ Y Sbjct: 1 MARLRIATFNINGIRSRLPALLQWLEREAPDIVCLQELKAADSAFPVEELRDAGYGAIWQ 60 Query: 61 GQKSYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 GQ ++NGVAIL+K P+E LPG + D +R++EA + + LYLP+GNP Sbjct: 61 GQSAWNGVAILAKGEAPLESRRGLPGFEDDTHSRYLEAAVGG----IVVACLYLPNGNPQ 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K+D K++W +R A++ + P++ AGD+N++P D YNP W DA E Sbjct: 117 PGPKFDYKLAWFGHLIRHAAKLYKSGHPVVLAGDFNVVPTDEDIYNPRSWLKDALLQPES 176 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R+ +++L G+TDA+R +Y+FWDY+ W N G+RIDH++LS + L A Sbjct: 177 RERYRQLLAQGWTDALRTHFGAERVYTFWDYFRRHWETNSGLRIDHVLLSADLAPRLRDA 236 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271 +D RG SDH P V L++ R+K+ Sbjct: 237 GVDRWVRGEPHASDHAPAWVELEVGAGRRKKS 268 >gi|54293632|ref|YP_126047.1| hypothetical protein lpl0685 [Legionella pneumophila str. Lens] gi|53753464|emb|CAH14919.1| hypothetical protein lpl0685 [Legionella pneumophila str. Lens] Length = 256 Score = 211 bits (538), Expect = 6e-53, Method: Composition-based stats. Identities = 90/261 (34%), Positives = 150/261 (57%), Gaps = 5/261 (1%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +A+WNVNS++ R+ + W++ + D++ +QETK D+NFP + YH+ GQ Sbjct: 1 MFKLASWNVNSLKVRLEQVLQWLESSQVDVLAMQETKLTDENFPVVSFTDKGYHVIFSGQ 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K+YNGVAI+S+Y +I T +P + + +R+ NLY+P+G +TS Sbjct: 61 KTYNGVAIISRYPMTDIQTDIPELEDPQRRILAATVKG-----IRLINLYVPNGGELTSD 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 KY K+ W+ + RF + + + GD+NI P+ D ++P+ WE + RQ+ Sbjct: 116 KYQYKLDWLNKVTRFIQHEISIYSKVAVVGDFNIAPEDRDVHDPVEWEGCVLVSPPERQA 175 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F K+ +G D+ R +S+WDY A ++ +N+G+RIDH++LS E +L ++ID Sbjct: 176 FMKILELGLHDSFRNFAQEEKAFSWWDYRAAAFRRNRGLRIDHVLLSHELNALCRQSKID 235 Query: 243 TKPRGWTKPSDHTPVIVSLDI 263 +PR +PSDH PV V L++ Sbjct: 236 KEPRKAERPSDHAPVWVELEL 256 >gi|121999062|ref|YP_001003849.1| exodeoxyribonuclease III Xth [Halorhodospira halophila SL1] gi|121590467|gb|ABM63047.1| Exodeoxyribonuclease III [Halorhodospira halophila SL1] Length = 267 Score = 211 bits (538), Expect = 6e-53, Method: Composition-based stats. Identities = 91/259 (35%), Positives = 143/259 (55%), Gaps = 5/259 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A+WNVNS++ R+ + AW + P +I LQETK D FP + LQ Y GQ+ Sbjct: 1 MKIASWNVNSLKVRLPQVKAWAQSATPSVIALQETKVPDDQFPLKALQEAGYRAAFAGQR 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVA+L++ P ++VT LPG + +R+ NLY+P+G + S K Sbjct: 61 TYNGVAVLARSAPQDVVTDLPGFADTQRRVLACTVSG-----VRVINLYVPNGQEVGSEK 115 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W++ + ++ LE E ++ GD+NI PQ D ++P WE F+ R + Sbjct: 116 YGYKLRWLEALHHWVARELEAHEHVVVLGDFNIAPQAADVHDPAEWEGKVLFSQSERDAL 175 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + L N+G D R +S+WDY +S+ +N+G+RID I+ S ++R+D Sbjct: 176 RGLLNLGLVDTFRLFEQPEGQFSWWDYRVNSFKRNRGLRIDLILASSALARACVASRVDV 235 Query: 244 KPRGWTKPSDHTPVIVSLD 262 +PR W +PSDH PV+ D Sbjct: 236 EPRRWERPSDHAPVVAEFD 254 >gi|171057931|ref|YP_001790280.1| exodeoxyribonuclease III Xth [Leptothrix cholodnii SP-6] gi|170775376|gb|ACB33515.1| exodeoxyribonuclease III Xth [Leptothrix cholodnii SP-6] Length = 254 Score = 211 bits (538), Expect = 6e-53, Method: Composition-based stats. Identities = 88/258 (34%), Positives = 130/258 (50%), Gaps = 5/258 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ R+ L W+ PD + LQETK D FP L + YH GQK Sbjct: 1 MKLATWNVNSLSVRLPQLLDWLVSAQPDALVLQETKLTDDKFPAAELLAAGYHAVWHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVA+LS+ +++V ++P D +R+ Y P+G S K Sbjct: 61 TYNGVALLSRTPAVDVVRNIPALDDPQARVI-----AGTVDGVRVIGGYFPNGQAPDSEK 115 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W+ + L L+ GD+NI P+ D Y+P+ W T E R F Sbjct: 116 FVYKMGWLTALEAWLQTELAAHTQLVLMGDFNIAPEDRDVYDPVAWAGQIHCTPEERAHF 175 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q L +G DA R +S+WDY ++ KN+G+RIDH+++ + + + +ID Sbjct: 176 QALVGLGLVDAFRLFEQPPKSWSWWDYRNLAFRKNQGLRIDHVLVGEALKARVTACQIDK 235 Query: 244 KPRGWTKPSDHTPVIVSL 261 PR +PSDH PV V L Sbjct: 236 APRKNERPSDHAPVWVEL 253 >gi|255535312|ref|YP_003095683.1| Exodeoxyribonuclease III [Flavobacteriaceae bacterium 3519-10] gi|255341508|gb|ACU07621.1| Exodeoxyribonuclease III [Flavobacteriaceae bacterium 3519-10] Length = 301 Score = 211 bits (538), Expect = 6e-53, Method: Composition-based stats. Identities = 95/262 (36%), Positives = 135/262 (51%), Gaps = 3/262 (1%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 + +AT+NVN I R+ L W+ E PDI CLQE K FP + Y Sbjct: 43 FEPMKIATYNVNGINGRLPVLLRWLNEKQPDIACLQELKAPQDKFPEAAIAEAGYEAVWV 102 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 GQKS+NGVA+LSK + ++ + L I LYLP+GNP Sbjct: 103 GQKSWNGVAVLSKIGTPTVSR---TSLPGDESDEASRYLEVKIADLIIACLYLPNGNPAP 159 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 K+D K+ W R A + + ++ GD+N++P D Y P + NDA F +V+ Sbjct: 160 GPKFDYKMQWFSRLDAHAEMLITSGKKVLLIGDFNVMPTEKDVYKPEKYINDALFHPDVQ 219 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 +F L G+TDAIR + +Y+FWDY+ +++ +N G+RIDH +LS E L A Sbjct: 220 AAFHNLTEQGWTDAIRYLYPDETIYTFWDYFRNAYQRNAGMRIDHFLLSAEVLPQLKKAG 279 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 +DT RGW K SDH PV + L+ Sbjct: 280 VDTDVRGWEKSSDHGPVWIELE 301 >gi|302557371|ref|ZP_07309713.1| exodeoxyribonuclease III [Streptomyces griseoflavus Tu4000] gi|302474989|gb|EFL38082.1| exodeoxyribonuclease III [Streptomyces griseoflavus Tu4000] Length = 259 Score = 211 bits (538), Expect = 7e-53, Method: Composition-based stats. Identities = 80/260 (30%), Positives = 125/260 (48%), Gaps = 1/260 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSI AR+ L AW++ + D++CLQE K + FP E L+ L Y Sbjct: 1 MRIATWNVNSITARLPRLLAWLESSGTDVLCLQEAKVAEDQFPAEQLRELGYESAVHATG 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVA+LS+ ++V LPGD + A +R+ ++Y+P+G + Sbjct: 61 RWNGVAVLSRVGLADVVKGLPGDPGYDGSVEPRAIAATCGP-VRVWSVYVPNGREVEHPH 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W + S P GDYN+ P D Y+ +E T R + Sbjct: 120 YAYKLQWFEALTAAVSGDAAGGRPFAVLGDYNVAPTDDDVYDRSAFEGSTHVTPAERAAL 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 L+ G +D + H Y++WDY + KN+G+RID + + + + +D Sbjct: 180 ASLREAGLSDVVPRPLKYEHPYTYWDYRQLCFPKNRGMRIDLVYGNAPFAKAVTDSYVDR 239 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 + R SDH PV+V LD+ Sbjct: 240 EERKGKGASDHAPVVVDLDV 259 >gi|307609446|emb|CBW98940.1| hypothetical protein LPW_07251 [Legionella pneumophila 130b] Length = 256 Score = 211 bits (538), Expect = 7e-53, Method: Composition-based stats. Identities = 90/261 (34%), Positives = 149/261 (57%), Gaps = 5/261 (1%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +A+WNVNS++ R+ + W++ + D++ +QETK D+NFP + YH+ GQ Sbjct: 1 MFKLASWNVNSLKVRLEQVLQWLESSQVDVLAMQETKLTDENFPVVSFTDKGYHVIFSGQ 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K+YNGVAI+S+Y +I T +P + + +R+ NLY+P+G +TS Sbjct: 61 KTYNGVAIISRYPMTDIQTDIPELEDPQRRILAATVKG-----IRLINLYVPNGGELTSD 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 KY K+ W+ + RF + + + GD+NI P D ++P+ WE + RQ+ Sbjct: 116 KYQYKLDWLNKVTRFIQHEISIYSKVAVVGDFNIAPDDRDVHDPVEWEGCVLVSPPERQA 175 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F K+ +G D+ R +S+WDY A ++ +N+G+RIDH++LS E +L ++ID Sbjct: 176 FMKILELGLHDSFRNFAQEEKAFSWWDYRAAAFRRNRGLRIDHVLLSHELNALCRQSKID 235 Query: 243 TKPRGWTKPSDHTPVIVSLDI 263 +PR +PSDH PV V L++ Sbjct: 236 KEPRKAERPSDHAPVWVELEL 256 >gi|75908773|ref|YP_323069.1| exodeoxyribonuclease III [Anabaena variabilis ATCC 29413] gi|75702498|gb|ABA22174.1| Exodeoxyribonuclease III [Anabaena variabilis ATCC 29413] Length = 260 Score = 211 bits (538), Expect = 7e-53, Method: Composition-based stats. Identities = 98/260 (37%), Positives = 145/260 (55%), Gaps = 2/260 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSIR R+ + W+K+N D++CLQETK D +FP ++L YH GQK Sbjct: 1 MKIATWNVNSIRTRLEQVVDWLKQNPVDVLCLQETKVIDHDFPRSPFENLGYHSYISGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT--LRIGNLYLPHGNPITS 121 +YNGVA++S+ Q ++ T D++ + E I +RI NLY+P+G+ I S Sbjct: 61 AYNGVALISQQQLTDVTTGFTPILPDIEPIWDEQKRVITGVIDGVRIVNLYVPNGSAIAS 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 KY+ K+ W+ + L L+ + GD+NI + D + + EN + RQ Sbjct: 121 EKYEYKLRWLTVLKEYLRSLLLLQPSICICGDFNIALEDKDIHEKVKAENHIMASPAERQ 180 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 + + + +GF DA R +S+WDY A S+ +N+G RIDH L+P S I Sbjct: 181 ALRDVLELGFADAFRKFTTEGGHFSWWDYRAASFRRNQGWRIDHHYLTPVLYEQAKSCII 240 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 D PR T+PSDHTPVIV + Sbjct: 241 DVSPRKLTQPSDHTPVIVEI 260 >gi|119491403|ref|ZP_01623422.1| Exodeoxyribonuclease III xth [Lyngbya sp. PCC 8106] gi|119453398|gb|EAW34561.1| Exodeoxyribonuclease III xth [Lyngbya sp. PCC 8106] Length = 261 Score = 211 bits (538), Expect = 7e-53, Method: Composition-based stats. Identities = 95/261 (36%), Positives = 137/261 (52%), Gaps = 3/261 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSIR R + AW++ N D++CLQETK D +FP + L YH+ GQK Sbjct: 1 MKIATWNVNSIRTRKEQVLAWLQANPVDLLCLQETKVIDPDFPRSPFEDLGYHLYVSGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT---QTLRIGNLYLPHGNPIT 120 +YNGVAI S+ ++ + + + +R+ NLY+P+G + Sbjct: 61 AYNGVAIFSRQPLEDVSLGFTAILAQNTVQTFDEQKRVIAGTIDGIRVINLYVPNGASVG 120 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 S KY K+SW+K + + LE + GD+NI + D +NP EN + R Sbjct: 121 SEKYLYKLSWLKLLKEYLQKTLEKNPNICVCGDFNIALEDRDIHNPKGRENHIMASDAER 180 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 Q+ +++ +G DA R + +S+WDY A S+ +NKG RIDH L+ S Sbjct: 181 QALKEILELGLADAFRKFNSESEQFSWWDYRAASFPRNKGWRIDHHYLTSSLYEKAKSCI 240 Query: 241 IDTKPRGWTKPSDHTPVIVSL 261 ID PR KPSDHTPVIV Sbjct: 241 IDKTPRKLEKPSDHTPVIVEF 261 >gi|327399082|ref|YP_004339951.1| exodeoxyribonuclease III Xth [Hippea maritima DSM 10411] gi|327181711|gb|AEA33892.1| exodeoxyribonuclease III Xth [Hippea maritima DSM 10411] Length = 258 Score = 211 bits (538), Expect = 7e-53, Method: Composition-based stats. Identities = 88/259 (33%), Positives = 139/259 (53%), Gaps = 6/259 (2%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64 V +WNVNSIRAR+ + ++K N PD++C+QETK E+ FP E + L Y++ T GQK Sbjct: 4 KVVSWNVNSIRARLELVLDFLKANQPDVLCMQETKVENVLFPKEAFEELGYNVATAGQKR 63 Query: 65 YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124 +NGVA +SK +I T + D + + + I NLY P+G + ++ Sbjct: 64 FNGVATVSKLNLEDIKTDFFDAEKDHKRSLL-----TKINDITIINLYFPNGQAPDTEQF 118 Query: 125 DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ 184 K+++I F S+ +E+ LI GD+N+ + +D Y+ E F E R++ + Sbjct: 119 QYKLNFIYELKSFLSKHYSIEDKLIILGDFNVAMEENDVYDVKQMEGKIGFHPEERKALK 178 Query: 185 KLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK 244 +L + GF D R + +S+WDY A S+ K++G+RID+I +P ID Sbjct: 179 ELYSWGFVDLFRKFNK-EKAFSWWDYRAASFWKDRGLRIDYIWSTPTLADKCKDCFIDKS 237 Query: 245 PRGWTKPSDHTPVIVSLDI 263 R KPSDH PV+ ++ Sbjct: 238 YRRKKKPSDHAPVVAVFEL 256 >gi|78778870|ref|YP_396982.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9312] gi|78712369|gb|ABB49546.1| Exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9312] Length = 281 Score = 211 bits (537), Expect = 8e-53, Method: Composition-based stats. Identities = 93/266 (34%), Positives = 146/266 (54%), Gaps = 4/266 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSIR R+ + W+ + NPDI+CLQETK D +FPFE + L Y +E GQK Sbjct: 1 MLIATWNVNSIRTRLSQIIDWMNQVNPDILCLQETKVMDNSFPFEPFEKLGYSVEVYGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT----INTQTLRIGNLYLPHGNPI 119 +YNGVAI+SK + + G Q I + ++I N+Y+P+G+ + Sbjct: 61 AYNGVAIISKIKAENVKKGFYGCSDSDQNAEIFLDQKRLISADINGIKIINVYVPNGSSL 120 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 S K++ KI+W+ + ++ + E + GD+N+ P D Y+P +E + Sbjct: 121 ESNKFEYKINWLSSLASYLDEQEKKGELICLMGDFNVAPSNLDIYDPKKYEGGIMASEIE 180 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R + + D+ R +S+WDY +++ NKG RIDHI +S E +S L S Sbjct: 181 RNALNNVLKERLIDSFRIFEKNPGHWSWWDYRNNAYELNKGWRIDHIYISKELSSKLKSC 240 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPE 265 ID+ PR +PSDH PV++ L++ + Sbjct: 241 VIDSSPRANLRPSDHAPVMIDLNLND 266 >gi|258653319|ref|YP_003202475.1| exodeoxyribonuclease III Xth [Nakamurella multipartita DSM 44233] gi|258556544|gb|ACV79486.1| exodeoxyribonuclease III Xth [Nakamurella multipartita DSM 44233] Length = 264 Score = 211 bits (537), Expect = 8e-53, Method: Composition-based stats. Identities = 84/262 (32%), Positives = 139/262 (53%), Gaps = 3/262 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+NSIRAR + AW++ ++ D++ +QETK +D FP E+ + L Y + G Sbjct: 1 MRIATWNINSIRARHDRVLAWLERSDVDVLAIQETKIDDARFPVESFERLGYRVAHHGTN 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT-LRIGNLYLPHGNPITST 122 +NGVAI S+ ++ +P + +EA +R+ +LY+P+G + Sbjct: 61 QWNGVAIASRVGLDDVQVGVPDLPAFGEDPAVEARSLGALCGGVRVWSLYVPNGRAVDDP 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEP--LIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 Y K+ W+ +A+++L E ++ GD+NI P D ++ ++ T R Sbjct: 121 HYHYKLHWLAVLRDYAAKQLADEPHLPMLLCGDFNIAPTDDDIWSVEYYQGSTHVTGPER 180 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 Q+F L + GFTD +R H +Y++WDY S+ K +G+RID + SP + + A+ Sbjct: 181 QAFANLTDAGFTDVVRPFHPGPGVYTYWDYTRLSFPKRRGMRIDFALASPALAARVTDAQ 240 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 ID + R SDH PVIV Sbjct: 241 IDREERKGKGSSDHAPVIVEFK 262 >gi|268318163|ref|YP_003291882.1| exodeoxyribonuclease III Xth [Rhodothermus marinus DSM 4252] gi|262335697|gb|ACY49494.1| exodeoxyribonuclease III Xth [Rhodothermus marinus DSM 4252] Length = 254 Score = 211 bits (537), Expect = 9e-53, Method: Composition-based stats. Identities = 89/260 (34%), Positives = 138/260 (53%), Gaps = 6/260 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + VATWNVNSIRAR+ + W+ PDI+CLQETK D +FP + + Y + GQK Sbjct: 1 MIVATWNVNSIRARLERVLQWLDRTEPDIVCLQETKVVDADFPADPFRERGYELAVFGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAILS+ ++ L G+ + L + ++Y+P+G + S Sbjct: 61 AYNGVAILSRLPLQDVRRGLDGEQEARFLQAR------CGDRLVVCSVYVPNGGTVGSEA 114 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 +D K+ W R + + E PL+ AGD+N+ P+P D P W + F R +F Sbjct: 115 WDYKLRWFDRLRAYLERAASPETPLLLAGDFNVAPEPRDVAFPEAWADSVLFHEAARAAF 174 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +KL + G D IR H+ +++WDY ++ + G+RIDH++ +P + A + Sbjct: 175 RKLIDWGLVDLIRLHHEGPGPFTWWDYRNLAFPRGDGLRIDHLLATPPVAACCTEAGVHR 234 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 + R KPSDH PV L++ Sbjct: 235 EERKGKKPSDHAPVWARLNL 254 >gi|294083994|ref|YP_003550751.1| exodeoxyribonuclease III [Candidatus Puniceispirillum marinum IMCC1322] gi|292663566|gb|ADE38667.1| exodeoxyribonuclease III [Candidatus Puniceispirillum marinum IMCC1322] Length = 256 Score = 211 bits (537), Expect = 9e-53, Method: Composition-based stats. Identities = 119/258 (46%), Positives = 169/258 (65%), Gaps = 4/258 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A+WNVNS +AR+ ++ W+K +N DI+ +QE K++D+NFP + L +HI GQK Sbjct: 1 MRIASWNVNSAKARLDHITGWLKADNADILMMQEIKSQDENFPHDAFTDLGWHIAVHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 SYNGVAI S++ +++ LPGDD D QAR+IEAT +RIGN+YLP+GNP K Sbjct: 61 SYNGVAIASRFPIDDVMNGLPGDDADEQARYIEATING----VRIGNIYLPNGNPAPGPK 116 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 +D K+SW+ R A + L E P++ GDYN++PQ DCY+P W DA + R +F Sbjct: 117 FDYKLSWMARLYDRAVELLATEMPVVLGGDYNVLPQDVDCYDPAAWVGDALTHDDSRAAF 176 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 K+ + G+ DA+RA H + Y++WDY A +W ++ G+RIDH++LSPEA L ID Sbjct: 177 FKILHAGYMDALRALHPSGVHYTYWDYQAGAWQRDNGLRIDHLLLSPEAGDRLTDVGIDR 236 Query: 244 KPRGWTKPSDHTPVIVSL 261 PRG KPSDHTP+ L Sbjct: 237 APRGLEKPSDHTPIWCQL 254 >gi|326801889|ref|YP_004319708.1| exodeoxyribonuclease III Xth [Sphingobacterium sp. 21] gi|326552653|gb|ADZ81038.1| exodeoxyribonuclease III Xth [Sphingobacterium sp. 21] Length = 259 Score = 211 bits (537), Expect = 1e-52, Method: Composition-based stats. Identities = 101/262 (38%), Positives = 152/262 (58%), Gaps = 4/262 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+NVN + R+ L W++E PD++CLQE K + FP + ++ Y++ GQK Sbjct: 1 MKIATYNVNGVNGRLPVLLRWLEEAKPDVVCLQELKAPQEKFPEQAIREAGYNVIWHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 S+NGVAIL+++ I + D + + + IG LYLP+GNP+ K Sbjct: 61 SWNGVAILARHLDIIEFGRVLPGDPEDTHS---RYIEASINNIHIGCLYLPNGNPVPGPK 117 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 +D K+ W++R A + L P+I GDYN+IP D Y P W +DA F EVR +F Sbjct: 118 FDYKLKWLQRLANHAQELLNKNIPVILTGDYNVIPTELDVYKPERWVDDALFRPEVRMAF 177 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 L G+TDAIR + +Y+FWDY+ +++ ++ G+RIDH +LSP+ L +A +D Sbjct: 178 SDLMTQGWTDAIRQLYPNERIYTFWDYFRNAYGRDAGLRIDHFLLSPQLVEKLVAAGVDR 237 Query: 244 KPRGWTKPSDHTPVIVSL-DIP 264 RGW K SDH PV + L D+P Sbjct: 238 YVRGWEKTSDHAPVWIELRDLP 259 >gi|226361308|ref|YP_002779086.1| exodeoxyribonuclease III [Rhodococcus opacus B4] gi|226239793|dbj|BAH50141.1| putative exodeoxyribonuclease III [Rhodococcus opacus B4] Length = 267 Score = 211 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 77/265 (29%), Positives = 129/265 (48%), Gaps = 7/265 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+RAR + W++ ++ D++ +QETK +D+ FP+E + L Y + G Sbjct: 1 MRIATWNVNSVRARTDRILDWLQRSDVDVLAIQETKCKDEQFPYERFRELGYEVAHVGLS 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-----TQTLRIGNLYLPHGNP 118 +NGVAI S+ ++ G + + +R+ +LY+P+G Sbjct: 61 QWNGVAIASRVGLDDVQIGFEGQPGFHKDPEVAPAQEARAIGATCNGVRVWSLYVPNGRE 120 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIF--AGDYNIIPQPHDCYNPIIWENDACFT 176 + Y K+ W+ + A L+ GD+N+ P D ++P ++E + Sbjct: 121 LADPHYTYKLEWLAKLHTDAVGWLDRNPDAQIALVGDWNVAPTDEDVWDPALFEGKTHTS 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 + R++FQ GF D +R +Y++WDY + K +G+RID ++ SP + Sbjct: 181 VPEREAFQAFVESGFADVVRPHTPGPGVYTYWDYTQLRFPKKQGMRIDFVLGSPALAGRV 240 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSL 261 A ID R SDH PVIV L Sbjct: 241 DKAEIDRNERKGKGASDHAPVIVDL 265 >gi|111019171|ref|YP_702143.1| DNA-(apurinic or apyrimidinic site) lyase [Rhodococcus jostii RHA1] gi|110818701|gb|ABG93985.1| probable DNA-(apurinic or apyrimidinic site) lyase [Rhodococcus jostii RHA1] Length = 270 Score = 211 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 79/268 (29%), Positives = 128/268 (47%), Gaps = 7/268 (2%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 M+ V +ATWNVNS+RAR + W++ ++ D++ +QETK +D+ FP+E + L Y + Sbjct: 1 MAAVRIATWNVNSVRARTDRILDWLQRSDVDVLAMQETKCKDEQFPYERFRELGYEVAHV 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-----TQTLRIGNLYLPH 115 G +NGVAI S+ ++ + + +RI +LY+P+ Sbjct: 61 GLSQWNGVAIASRVGLEDVQIGFEDQPGFHKDPEVAPAQEARAIGATCNGVRIWSLYVPN 120 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIF--AGDYNIIPQPHDCYNPIIWENDA 173 G + Y K+ W+ + A L GD+N+ P D ++P ++E Sbjct: 121 GRELADPHYTYKLDWLAKLHTDAVGWLGQNPDAQIALVGDWNVAPTDEDVWDPALFEGKT 180 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 + R++FQ GF D +R +Y++WDY + K +G+RID ++ SP Sbjct: 181 HTSAPEREAFQAFVESGFADVVRPHTPGPGVYTYWDYTQLRFPKKQGMRIDFVLGSPALA 240 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + A ID R SDH PVIV L Sbjct: 241 GRVDKAEIDRNERKGKGASDHAPVIVDL 268 >gi|299530483|ref|ZP_07043903.1| exodeoxyribonuclease III Xth [Comamonas testosteroni S44] gi|298721459|gb|EFI62396.1| exodeoxyribonuclease III Xth [Comamonas testosteroni S44] Length = 258 Score = 211 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 90/259 (34%), Positives = 142/259 (54%), Gaps = 1/259 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ R+ + W+ N D + LQE K D FP + Y + GQK Sbjct: 1 MKIATWNVNSLSVRLPQVLDWLAANPVDALGLQELKLTDDKFPHMAFEEAGYKAVSHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVA +++ ++V ++PG D D QAR I T +R+ N Y +G S K Sbjct: 61 TYNGVAWITRDTGRDVVRNIPGLD-DEQARIIATTIDSPNGEIRLINGYFVNGQEPGSEK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W++ + ++ L L+ GD+N+ P+ D Y+P+ ++ T+E R F Sbjct: 120 FAYKMRWLQALHDWIQNQMTLHPRLVLVGDFNVAPEDRDSYDPVGLKDTIHHTVEERDHF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q+L +G +DA R YS+WDY + KN+G+RIDHI++S S + + +D Sbjct: 180 QRLLQLGLSDAFRMFEQPEKSYSWWDYRMLGFQKNRGLRIDHILVSEALKSKVSACSVDR 239 Query: 244 KPRGWTKPSDHTPVIVSLD 262 PR +PSDH PV+V+L+ Sbjct: 240 APRKNKQPSDHAPVVVTLN 258 >gi|256824430|ref|YP_003148390.1| Exodeoxyribonuclease III [Kytococcus sedentarius DSM 20547] gi|256687823|gb|ACV05625.1| Exodeoxyribonuclease III [Kytococcus sedentarius DSM 20547] Length = 281 Score = 211 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 82/282 (29%), Positives = 128/282 (45%), Gaps = 13/282 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+RAR+ +A +++ + D++ LQETK +D FP E L Y I G Sbjct: 1 MRIATWNVNSLRARLDRVAEFLQRHEVDVLALQETKVQDDKFPAERFAELGYEIAFHGLN 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT------------FTINTQTLRIGNL 111 +NGVAI S+ ++ P +EA T +R+ +L Sbjct: 61 QWNGVAIASRVGLEDVTVAFPDQPGWGDEPVVEARALGATVGGQPRADGSATPRIRLWSL 120 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 Y+P+G I D K+ W+ A + PL GD+N+ P D ++ +E Sbjct: 121 YVPNGREIGHPHMDYKVGWLDTLAGHAGTWAGEDLPLALVGDFNVAPLDTDVWDIAAFEG 180 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 T R +FQ + G D +R H +++WDY + K +G+RID ++ S Sbjct: 181 HTHVTEPERAAFQGFLDAGLVDVVR-PHTEPDTFTYWDYQQLRFPKRQGMRIDFVLGSQP 239 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDS 273 + A +D + R SDH PV+V L I P + Sbjct: 240 FADRVTGAFVDREERKGKGASDHAPVVVDLAIDLPTGTRDTP 281 >gi|317492293|ref|ZP_07950722.1| exodeoxyribonuclease III [Enterobacteriaceae bacterium 9_2_54FAA] gi|316919632|gb|EFV40962.1| exodeoxyribonuclease III [Enterobacteriaceae bacterium 9_2_54FAA] Length = 269 Score = 211 bits (536), Expect = 1e-52, Method: Composition-based stats. Identities = 83/268 (30%), Positives = 123/268 (45%), Gaps = 8/268 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A I ++ PD+I LQETK D FP L+ L YHI GQK Sbjct: 1 MKFISFNINGLRARPHQLEAIIAKHQPDVIGLQETKVHDDMFPLADLEHLGYHIFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 + GVA+L+K QP+ + P D+ D Q R I A T L + N Y P G Sbjct: 61 GHYGVALLTKEQPLAVRKGFPTDEEDAQRRIIMADIATPTGVLTVINGYFPQGESRDHPI 120 Query: 124 -YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACFT 176 + K + + + +I GD NI P D + F Sbjct: 121 KFPAKTKFYQDLQNYLETEQTPAGQVIVMGDVNISPTDSDIGIGEENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +L+N G D R + + +S++DY + + +N+G+RID ++ S Sbjct: 181 PEEREWMDRLKNWGLIDTYRQANPERNDQFSWFDYRSKGFDENRGLRIDLVLASQSLAER 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 ID + RG KPSDH P+ + Sbjct: 241 CIDTGIDYEIRGMEKPSDHAPIWADFKL 268 >gi|302555181|ref|ZP_07307523.1| exodeoxyribonuclease III [Streptomyces viridochromogenes DSM 40736] gi|302472799|gb|EFL35892.1| exodeoxyribonuclease III [Streptomyces viridochromogenes DSM 40736] Length = 259 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 80/260 (30%), Positives = 128/260 (49%), Gaps = 1/260 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSI AR+ L AW++ + D++CLQE K ++ FP E L+ L Y Sbjct: 1 MRIATWNVNSITARLPRLLAWLESSGTDVLCLQEAKVAEEQFPSEQLRELGYESAVHATG 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVA+LS+ ++V LPGD + A LR+ ++Y+P+G + Sbjct: 61 RWNGVAVLSRVGIEDVVKGLPGDPGFDGSVEPRAISATCGP-LRVWSVYVPNGREVDHPH 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W + + P GDYN+ P D ++P + + T R + Sbjct: 120 YAYKLQWFEALKAAVAGDAAGSRPFAVMGDYNVAPTDDDVFDPAAFADSTHVTPAERAAL 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 L+ G +D + H +++WDY + KN+G+RID + + T + A +D Sbjct: 180 ASLREAGLSDVVPRPLKYEHPFTYWDYRQLCFPKNRGMRIDLVYANEPFTKAVEDAYVDR 239 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 + R SDH PV+V LD+ Sbjct: 240 EERKGKGASDHAPVVVDLDV 259 >gi|89901754|ref|YP_524225.1| exodeoxyribonuclease III [Rhodoferax ferrireducens T118] gi|89346491|gb|ABD70694.1| Exodeoxyribonuclease III [Rhodoferax ferrireducens T118] Length = 274 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 86/259 (33%), Positives = 134/259 (51%), Gaps = 5/259 (1%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + ATWNVNS+ R+ + W++ N D++ LQE K D FP + + YH E GQ Sbjct: 15 TMKFATWNVNSLTVRLPQVLDWLQANPVDVLALQELKLTDDKFPVDAFRQAGYHAECFGQ 74 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K+YNGVA+LS+ + +V ++PG D+ +R+ Y P+G S Sbjct: 75 KTYNGVALLSREPALNVVRNVPGFADDMARSISAEVNG-----VRVIGAYFPNGQEPGSD 129 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K++ K++W+K + L L+ GDYNI D ++P+ ++ T E R Sbjct: 130 KFEYKMAWLKGLRDWVRGELLTHPRLVLMGDYNITFDDADVWDPVGLKDTIHCTEEERYH 189 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 + L +G D+ R YS+WDY ++ +N G+RIDHI++S L+ + ID Sbjct: 190 LRALIALGLHDSFRLFAQPEKSYSWWDYRDFAFRRNHGLRIDHILVSDALKPLVTACVID 249 Query: 243 TKPRGWTKPSDHTPVIVSL 261 PR +PSDH PV+V+L Sbjct: 250 KAPRKNERPSDHAPVVVTL 268 >gi|289705726|ref|ZP_06502110.1| exodeoxyribonuclease III [Micrococcus luteus SK58] gi|289557566|gb|EFD50873.1| exodeoxyribonuclease III [Micrococcus luteus SK58] Length = 275 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 78/274 (28%), Positives = 133/274 (48%), Gaps = 16/274 (5%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+RAR + A+++ ++ D++ +QETK D+NFP+E + Y + G Sbjct: 1 MKIATWNVNSLRARADRVEAFLERHDIDVLAIQETKCRDENFPWELFERAGYEVVHNGTS 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT------------INTQTLRIGNL 111 +NGVAI S+ ++ PG + + +R+ +L Sbjct: 61 QWNGVAIASRVGLSDVQRGFPGQPHFGKGGVDPQEESRAIGATVGAEAADGVAPVRLWSL 120 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIW 169 Y+P+G + + K+ W++ A+ RL + AGD+NI PQ D ++ ++ Sbjct: 121 YVPNGRGLENEHMGYKLEWLRVLQEHAAARLAEDPDTRLALAGDWNIAPQDEDVWDIELF 180 Query: 170 E--NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227 + + R +F ++ G D +R H +Y++WDY ++ K KG+RID + Sbjct: 181 QREGYTHVSPAERAAFHAFEDAGLVDVVRPRHPGPGVYTYWDYTGLAFPKKKGMRIDFQL 240 Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 SP + A ID + R SDH PV+V L Sbjct: 241 CSPALAQTVTDAWIDREERKGKGASDHAPVVVEL 274 >gi|21224654|ref|NP_630433.1| exonuclease [Streptomyces coelicolor A3(2)] gi|3367747|emb|CAA20072.1| putative exonuclease [Streptomyces coelicolor A3(2)] Length = 259 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 77/260 (29%), Positives = 124/260 (47%), Gaps = 1/260 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSI AR+ L AW++ + D++CLQE K + FPF+ L+ Y Sbjct: 1 MRIATWNVNSITARLPRLLAWLESSGTDVLCLQEAKVAEAQFPFDALREAGYEAAVHATG 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVA+LS+ ++V LPGD + A +R+ ++Y+P+G + Sbjct: 61 RWNGVAVLSRVGLEDVVKGLPGDPGYEGVQEPRAISATCGP-VRVWSVYVPNGREVDHPH 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W + P GDYN+ P D Y+ +E T R + Sbjct: 120 YAYKLQWFEALRAAVEGDAAGGRPFAVLGDYNVAPTDDDVYDRAAFEGATHVTPAERAAL 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 L+ G +D + H +++WDY + KN+G+RID + + + + +D Sbjct: 180 ASLRGAGLSDVVPRPLKYDHPFTYWDYRQLCFPKNRGMRIDLVYGNEPFAKAVTDSYVDR 239 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 + R SDH PV+V LD+ Sbjct: 240 EERKGKGASDHAPVVVDLDL 259 >gi|294632194|ref|ZP_06710754.1| exodeoxyribonuclease III [Streptomyces sp. e14] gi|292835527|gb|EFF93876.1| exodeoxyribonuclease III [Streptomyces sp. e14] Length = 261 Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats. Identities = 79/260 (30%), Positives = 124/260 (47%), Gaps = 1/260 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSI AR+ L AW++ + D++CLQE K + FP E L+ L Y Sbjct: 3 MRIATWNVNSITARLPRLLAWLESSGTDVLCLQEAKVAEDQFPAEQLRELGYESAVHATG 62 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVA+LS+ ++V LPGD + A +R+ ++Y+P+G + Sbjct: 63 RWNGVAVLSRVGLADVVKGLPGDPGYDGVQEPRAVSATCGP-VRVWSVYVPNGREVDHPH 121 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W + + P GDYN+ P D Y+ +E T R + Sbjct: 122 YAYKLEWFEALKAAVAGDAAGSRPFAVLGDYNVAPTDDDVYDRAAFEGATHVTPAERAAL 181 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 L+ G D + H +++WDY + KN+G+RID + + + A +D Sbjct: 182 ASLREAGLADVVPRPLKYEHPFTYWDYRQLCFPKNRGMRIDLVYGNEPFAKAVTDAYVDR 241 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 + R SDH PV+V LD+ Sbjct: 242 EERKGKGASDHAPVVVDLDV 261 >gi|91777907|ref|YP_553115.1| exodeoxyribonuclease III [Burkholderia xenovorans LB400] gi|91690567|gb|ABE33765.1| Exodeoxyribonuclease III [Burkholderia xenovorans LB400] Length = 270 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 104/272 (38%), Positives = 154/272 (56%), Gaps = 5/272 (1%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 M+ + +AT+N+N IR+R+ L W++ PDI+CLQE K D FP E L+ Y Sbjct: 1 MAKLRIATFNINGIRSRLPALLQWLEREAPDIVCLQELKAADSAFPVEQLRDAGYGAIWQ 60 Query: 61 GQKSYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 GQ ++NGVAILSK P+E LPG + D +R++EA + + LYLP+GNP Sbjct: 61 GQSAWNGVAILSKGEAPLESRRGLPGFEDDTHSRYLEAAVGG----IVVACLYLPNGNPQ 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K+D K++W +R A++ P++ AGD+N++P D YNP W DA E Sbjct: 117 PGPKFDYKLAWFDHLIRHAAKLYRSGHPVVLAGDFNVVPTDEDIYNPRSWLKDALLQPES 176 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R+ +++L G+TDA+R +Y+FWDY+ W N G+RIDH++LS + L A Sbjct: 177 RERYRQLLAQGWTDALRTRFGNERVYTFWDYFRRHWETNSGLRIDHLLLSADLAPRLRDA 236 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271 +D RG SDH P V L++ R+K+ Sbjct: 237 GVDRWVRGEPHASDHAPTWVELEMGAGRRKKS 268 >gi|256422393|ref|YP_003123046.1| exodeoxyribonuclease III Xth [Chitinophaga pinensis DSM 2588] gi|256037301|gb|ACU60845.1| exodeoxyribonuclease III Xth [Chitinophaga pinensis DSM 2588] Length = 259 Score = 210 bits (535), Expect = 2e-52, Method: Composition-based stats. Identities = 99/257 (38%), Positives = 148/257 (57%), Gaps = 2/257 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+NVN + R+ L W++E+ PD++CLQE K + FP + ++ Y+ GQK Sbjct: 1 MKIATYNVNGVNGRLPVLLRWLEESAPDVVCLQELKAPQEKFPEQAIRDAGYNAIWHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 S+NGVAIL++ IE + D + + +G LYLP+GNP K Sbjct: 61 SWNGVAILARNLQIEEIRRAL--PGDPEDVHSRYIEAVINGDFILGCLYLPNGNPAPGPK 118 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 +D K++W KR A + L + P+I GDYN++P D Y P W +DA F E R +F Sbjct: 119 FDYKLNWFKRLTAHAKELLAQDVPVILTGDYNVMPTELDVYKPERWVDDALFRPETRAAF 178 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 ++L +G+TDAIR + +Y+FWDY+ D++ +N G+RIDH +LSP L +A +D Sbjct: 179 KELVELGWTDAIRKLYPEEKIYTFWDYFRDAYGRNAGLRIDHFLLSPHFGKRLKAAGVDR 238 Query: 244 KPRGWTKPSDHTPVIVS 260 RGW K SDH PV + Sbjct: 239 DVRGWEKTSDHAPVWIE 255 >gi|86607730|ref|YP_476492.1| exodeoxyribonuclease III [Synechococcus sp. JA-2-3B'a(2-13)] gi|86556272|gb|ABD01229.1| exodeoxyribonuclease III [Synechococcus sp. JA-2-3B'a(2-13)] Length = 261 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 94/262 (35%), Positives = 140/262 (53%), Gaps = 3/262 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNP-DIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + VATWNVNSIR R+ + AW+ D++CLQETK D++FP Q +H+E GQ Sbjct: 1 MQVATWNVNSIRTRLPQVLAWLDSQGSLDVLCLQETKVVDEDFPRAAFQERGFHVEVYGQ 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT-FTINTQTLRIGNLYLPHGNPITS 121 KSYNGVA++S+ P ++ + + + +RI NLY+P+G + S Sbjct: 61 KSYNGVALISRDPPEKVERGFGALLPSAADLDEQKRLMSAIYRGIRILNLYVPNGAEVGS 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 KY K+ W+ + + L +P++ GD+NI + D Y+P E + Sbjct: 121 EKYAYKLRWLATLKDYLAVALSQGDPILLCGDFNIALEDRDIYDPQKAGEIMASEPERQ- 179 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 + Q++ +GF DA R +S+WDY + + +N+G RIDH LS E + I Sbjct: 180 ALQEILALGFEDAFRRFTPDPGHFSWWDYRSGGFQRNRGWRIDHHYLSRELQEKATACWI 239 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 D +PR KPSDH PVIV+LDI Sbjct: 240 DVEPRRAEKPSDHAPVIVALDI 261 >gi|254818951|ref|ZP_05223952.1| exodeoxyribonuclease III [Mycobacterium intracellulare ATCC 13950] Length = 268 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 80/268 (29%), Positives = 125/268 (46%), Gaps = 7/268 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSIR+R+ + W+ + D++ +QETK D FP L Y + G Sbjct: 1 MRIATWNVNSIRSRLPRVLDWLARTDVDVLAMQETKCSDSQFPTLPFFELGYEVAHVGFN 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLD-----VQARFIEATFTINTQTLRIGNLYLPHGNP 118 +NGVAI S+ ++ G V A +R+ +LY+P+G Sbjct: 61 QWNGVAIASRVGLDDVQIGFDGQPTWSGKPEVAAVAEARALAATCGGVRLWSLYVPNGRA 120 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEP--LIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + Y K+ W+ A L + + AGD+NI PQ D ++ + + Sbjct: 121 LGDPHYAYKLDWLAALRDSAEGWLRDDPGAAIALAGDWNIAPQDDDVWSMEFFAGATHVS 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 R++F + FTD +R +Y++WDY + K +G+RID I+ SP S + Sbjct: 181 APERRAFNAIVEAQFTDLVRPFAPGPGVYTYWDYTRLRFPKRQGMRIDFILGSPALASRV 240 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDIP 264 ARID + R SDH PV+V L + Sbjct: 241 TDARIDREERKGKAASDHAPVLVDLRVD 268 >gi|217979561|ref|YP_002363708.1| exodeoxyribonuclease III Xth [Methylocella silvestris BL2] gi|217504937|gb|ACK52346.1| exodeoxyribonuclease III Xth [Methylocella silvestris BL2] Length = 303 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 122/279 (43%), Positives = 173/279 (62%), Gaps = 6/279 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+NVN I R+ L W+KE PD++CLQE K D+ FP L++ Y GQK Sbjct: 1 MKIATFNVNGINGRLSVLLRWLKETRPDVVCLQELKAPDERFPIRELENAGYGAIWHGQK 60 Query: 64 SYNGVAILSKY-QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 S+NGVAILS +PIE LPGD D Q+R++EA + + LYLP+GNP Sbjct: 61 SWNGVAILSASGKPIETRRGLPGDPDDSQSRYLEAAIDG----IVVACLYLPNGNPAPGR 116 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K+D K+ W++R +A++ L L+ P+I AGDYNIIP D Y P W +DA F LEVR++ Sbjct: 117 KFDYKLQWLQRLTDYAAELLALKVPVILAGDYNIIPTELDVYKPERWVDDALFRLEVREA 176 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 FQ L + G+TDA+R H +Y+FWDY+ ++W +N G+R+DH++L+P T L +A +D Sbjct: 177 FQILVSQGWTDALRTLHPGERVYTFWDYFRNAWDRNAGLRLDHLLLNPPVTKRLIAADVD 236 Query: 243 TKPRGWTKPSDHTPVIVSL-DIPEPRKKQQDSTSQNMKP 280 RGW K SDH PV + L D P ++ S+ +P Sbjct: 237 RAVRGWEKASDHAPVWIELSDAARPLRRPSASSKGVARP 275 >gi|310814721|ref|YP_003962685.1| exodeoxyribonuclease III [Ketogulonicigenium vulgare Y25] gi|308753456|gb|ADO41385.1| exodeoxyribonuclease III [Ketogulonicigenium vulgare Y25] Length = 259 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 118/259 (45%), Positives = 163/259 (62%), Gaps = 1/259 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+N+N I+AR+ + W+ +PD+ QE K+ D+ FP ++ L Y++ET GQK Sbjct: 1 MRIATYNINGIKARLETVTEWLTRESPDVAIFQEIKSVDEGFPRSAIEDLGYNLETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVAI SK ++ LPGDD D Q+R+IEAT I +RI LYLP+GNP K Sbjct: 61 GFNGVAIASKLPMEDVTRGLPGDDNDEQSRWIEAT-VIGKTAVRICGLYLPNGNPAPGPK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 YD K++W++R + A L EEP AGDYN+IPQ D NP W DA + + R +F Sbjct: 120 YDYKLAWMERLHKRAEALLASEEPAFMAGDYNVIPQAEDAKNPAEWLEDALYLPQTRDAF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +++ N+GFTDA RA YSFWD+ A +W ++ GIRIDH +L+P+ LL +A I+ Sbjct: 180 RRILNLGFTDAFRAITQGPGHYSFWDFQAGAWQRDNGIRIDHFLLTPQCADLLQNAWIEK 239 Query: 244 KPRGWTKPSDHTPVIVSLD 262 RG KPSDH PV V LD Sbjct: 240 DARGREKPSDHVPVWVELD 258 >gi|238794520|ref|ZP_04638129.1| Exodeoxyribonuclease III [Yersinia intermedia ATCC 29909] gi|238726203|gb|EEQ17748.1| Exodeoxyribonuclease III [Yersinia intermedia ATCC 29909] Length = 271 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 85/271 (31%), Positives = 131/271 (48%), Gaps = 8/271 (2%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 M + ++N+N +RAR H LAA I+++ PD+I LQETK D FP E + YH+ Sbjct: 1 MLTMKFVSFNINGLRARPHQLAAIIEQHQPDVIGLQETKVHDDMFPLEDVSQHGYHVFYH 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 GQK + GVA+L+K +P+ + P D+ D Q R I A + L + N Y P G Sbjct: 61 GQKGHYGVALLTKNEPLAVRRGFPTDEEDAQRRIIMADIATSNGPLTVINGYFPQGESRD 120 Query: 121 STK-YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDA 173 + K + ++ Q+L + ++ GD NI P D + Sbjct: 121 HPIKFPAKERFYADLQQYLEQQLSADAQVLIMGDLNISPTDLDIGIGEDSRKRWLRTGKC 180 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 F E R +LQN G D RA + + +S++DY + + +N+G+RID ++ S Sbjct: 181 SFLPEERAWLARLQNWGLVDTFRAANPECNDQFSWFDYRSRGFDENRGLRIDLLLASQPL 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + + ID + RG KPSDH PV + Sbjct: 241 ATRCIATGIDYEIRGMEKPSDHAPVWSEFAL 271 >gi|327481832|gb|AEA85142.1| exodeoxyribonuclease III [Pseudomonas stutzeri DSM 4166] Length = 263 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 109/262 (41%), Positives = 159/262 (60%), Gaps = 5/262 (1%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 M + +AT+N+N IRAR+ NL W++ PD++CLQE K +D +FP + ++ Y Sbjct: 1 MDRLKIATFNINGIRARLPNLLEWLEREQPDVVCLQELKAQDADFPIDDIRGAGYGAIWH 60 Query: 61 GQKSYNGVAILSKY-QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 GQKS+NGVAIL++ +P+EI LPGD D +R++EA + + +LYLP+GNP Sbjct: 61 GQKSWNGVAILARDSEPLEIRRGLPGDPDDSHSRYLEAAV----HGVIVASLYLPNGNPQ 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K+D K++W +R + A+ L P++ AGDYN++P D YNP W DA E Sbjct: 117 PGPKFDYKLAWFERLIEHAAGLLASGHPVVLAGDYNVVPTDEDIYNPRSWRKDALLQPES 176 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R +++L G+TDA+RA +Y+FWDY+ W KN G+RIDH++LSP+ L +A Sbjct: 177 RACYERLLAQGWTDALRAQFPDEPVYTFWDYFRQHWQKNSGLRIDHLLLSPDLAPCLQAA 236 Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261 +D RG SDH P VSL Sbjct: 237 GVDRWVRGQEHASDHAPTWVSL 258 >gi|302537782|ref|ZP_07290124.1| exodeoxyribonuclease III [Streptomyces sp. C] gi|302446677|gb|EFL18493.1| exodeoxyribonuclease III [Streptomyces sp. C] Length = 259 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 76/260 (29%), Positives = 126/260 (48%), Gaps = 1/260 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+NVNSI AR+ L AW++ + D++C+QETK + FP L+ L Y Sbjct: 1 MRIATYNVNSITARLPRLLAWLESSGTDVLCVQETKCSAEQFPAAELRELGYESVVNATG 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVA+LS+ ++V LPG + A +R+ ++Y+P+G + Sbjct: 61 RWNGVALLSRVGLEDVVVGLPGGPDYEGVQEPRAISATCGG-VRVWSVYVPNGREVEHDH 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K++W ++ P GD+N+ P D Y+P ++ T R + Sbjct: 120 YGYKLNWFGALATAIAEDAAGTRPFAVLGDFNVAPTDEDVYDPAVFAGLTHVTPAERAAL 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + L+ G D + Y+FWDY ++ KN+G+RID + + + A +D Sbjct: 180 EALRTAGLADVMPRALKYDRPYTFWDYRQLAFPKNRGMRIDLVYGNEPFAKAVKDAYVDR 239 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 + R SDH PV+V LD+ Sbjct: 240 EERKGKGASDHAPVVVDLDL 259 >gi|126735878|ref|ZP_01751622.1| exodeoxyribonuclease III [Roseobacter sp. CCS2] gi|126714435|gb|EBA11302.1| exodeoxyribonuclease III [Roseobacter sp. CCS2] Length = 266 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 111/264 (42%), Positives = 154/264 (58%), Gaps = 6/264 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+N+N ++ARI L WI E PD+ LQE K+ D+ FP E + Y++ET GQK Sbjct: 1 MKIATFNINGVKARIGALTDWIDEAQPDVAVLQEIKSVDEGFPREVFEDKGYNVETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT------QTLRIGNLYLPHGN 117 +NGVAILSK ++ LPG + + + + +RI LYLP+GN Sbjct: 61 GFNGVAILSKLPLEDVTRGLPGAEGAGREGVDDEEARYIEATVVGEKAVRICGLYLPNGN 120 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 P KYD K+ W++R A Q + EE + GDYNIIPQ D P W +DA F Sbjct: 121 PAPGPKYDYKLRWMERLHARAQQLMAHEEVALMCGDYNIIPQAEDAARPDAWRDDALFRQ 180 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 + R +++++ N+GFT+A RA YSFWDY A +W KN GIRIDH +L+P+ LL+ Sbjct: 181 DSRDAYRRILNLGFTEAFRAREAGAGHYSFWDYQAGAWDKNDGIRIDHFLLTPQCADLLN 240 Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261 + I++ RG KPSDH PV V L Sbjct: 241 TCWIESDVRGREKPSDHVPVWVDL 264 >gi|254422826|ref|ZP_05036544.1| exodeoxyribonuclease III [Synechococcus sp. PCC 7335] gi|196190315|gb|EDX85279.1| exodeoxyribonuclease III [Synechococcus sp. PCC 7335] Length = 261 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 92/261 (35%), Positives = 138/261 (52%), Gaps = 3/261 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V +WNVNSIR R+ + W++ N D++CLQETK DK+FP + + YH GQK Sbjct: 1 MKVTSWNVNSIRTRLEQVTQWLQANPVDVLCLQETKVVDKDFPAQAFIDIGYHAYFYGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQA---RFIEATFTINTQTLRIGNLYLPHGNPIT 120 SYNGVA++S+ + + + + +RI NLY+P+G+ I Sbjct: 61 SYNGVALVSRAPLESVQMGFGAILDEATVGDLDAQKRVISGVLGNVRIVNLYVPNGSSIN 120 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 S KY+ K+SW+ ++ +LE L GD+NI + D Y + + R Sbjct: 121 SEKYEYKLSWLALLKQYLVHQLEAHPKLNVCGDFNIALENKDIYTDKNRDKHIMSSPVER 180 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 Q+ + + ++G +DA R D +S+WDY +S+++N G RIDH LSP + S Sbjct: 181 QTLRDVLSVGLSDAFRKFTDEGGHFSWWDYRTNSFARNTGWRIDHHYLSPSLYEIATSCT 240 Query: 241 IDTKPRGWTKPSDHTPVIVSL 261 IDT PRG +PSDH PV V Sbjct: 241 IDTVPRGLERPSDHAPVTVEY 261 >gi|217969881|ref|YP_002355115.1| exodeoxyribonuclease III Xth [Thauera sp. MZ1T] gi|217507208|gb|ACK54219.1| exodeoxyribonuclease III Xth [Thauera sp. MZ1T] Length = 254 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 87/258 (33%), Positives = 138/258 (53%), Gaps = 5/258 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS++ R+ + W+ N PD +CLQE K EDK FP L++ YH GQK Sbjct: 1 MKIATWNVNSLKVRLPQVLDWLAANQPDALCLQELKLEDKAFPLAELEAAGYHAVFIGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAILS + + + I A +R+ Y P+G + S K Sbjct: 61 TYNGVAILSPQPIDAATVVRNIPGFEDEQKRIIAATIAG---VRVVCGYFPNGQAVGSDK 117 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 ++ K+ W+ + L+ E L+ AGD+NI P+ D + W+++ + R +F Sbjct: 118 FEYKLRWLAALTEWLRAELKTHERLVLAGDFNIAPEDRDAHPD--WKDEIHVSAPERAAF 175 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + LQ +G DA R +S+WDY ++ +N G+RIDH+++SP + + +D Sbjct: 176 RALQELGLIDAFRLFEQPERAFSWWDYRMMAFRRNFGLRIDHLLVSPALRAACRNCVVDK 235 Query: 244 KPRGWTKPSDHTPVIVSL 261 +PR +PSDH PV++ L Sbjct: 236 EPRRLERPSDHAPVVLEL 253 >gi|238751649|ref|ZP_04613139.1| Exodeoxyribonuclease III [Yersinia rohdei ATCC 43380] gi|238710211|gb|EEQ02439.1| Exodeoxyribonuclease III [Yersinia rohdei ATCC 43380] Length = 271 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 86/271 (31%), Positives = 130/271 (47%), Gaps = 8/271 (2%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 M + ++N+N +RAR H LAA I+++ PD+I LQETK D FP E + YH+ Sbjct: 1 MLTMKFVSFNINGLRARPHQLAAIIEQHQPDVIGLQETKVHDDMFPLEDVSQHGYHVFYH 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 GQK + GVA+L+K QP+ + P D+ D Q R I A TL + N Y P G Sbjct: 61 GQKGHYGVALLTKEQPLAVRRGFPTDEEDAQRRIIMADIATPQGTLTVINGYFPQGESRD 120 Query: 121 STK-YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDA 173 + K + ++ Q L E ++ GD NI P + + Sbjct: 121 HPIKFPAKQRFYADLQQYLEQHLSPESQVLIMGDINISPTDLDIGIGEESRKRWLRTGKC 180 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 F E R + LQ+ G D RA + + +S++DY + + +N+G+RID ++ S Sbjct: 181 SFLPEERAWLEHLQSWGLVDTFRAANPDCNDQFSWFDYRSRGFDENRGLRIDLLLASQPL 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + + ID + RG KPSDH PV + Sbjct: 241 AARCIATGIDYEIRGMEKPSDHAPVWSEFAL 271 >gi|148548255|ref|YP_001268357.1| exodeoxyribonuclease III [Pseudomonas putida F1] gi|148512313|gb|ABQ79173.1| Exodeoxyribonuclease III [Pseudomonas putida F1] Length = 265 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 104/262 (39%), Positives = 152/262 (58%), Gaps = 5/262 (1%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 M + +AT+N+N IR+R+ L AW++ PDI CLQE K D+ FP L++ Y Sbjct: 1 MKALKIATFNINGIRSRLPALLAWLEREQPDIACLQELKAADQQFPRAELEAAGYGSLHH 60 Query: 61 GQKSYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 GQ S+NGVAIL + P+E+ LPG + D Q+R++EA + + LYLP+GNP Sbjct: 61 GQPSWNGVAILVRGSDPLEVRRGLPGLEEDSQSRYLEAA----AHGVLVACLYLPNGNPQ 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K+D K+ W + ++ A E P + AGD+N++P D YNP W DA E Sbjct: 117 PGPKFDYKLHWFECLIQHARSLYESGHPTLLAGDFNVVPTDMDIYNPRSWLKDALLQPES 176 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R +Q+L + G+ DAIR + +Y+FWDY+ + W++N G+RIDH++L+PE L A Sbjct: 177 RACYQRLLDQGWLDAIRHLYPDERVYTFWDYFRNHWARNAGLRIDHLLLNPELAPYLKRA 236 Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261 +D R K SDH PV + L Sbjct: 237 GVDAWVRNEAKASDHAPVWIEL 258 >gi|330466791|ref|YP_004404534.1| exodeoxyribonuclease III Xth [Verrucosispora maris AB-18-032] gi|328809762|gb|AEB43934.1| exodeoxyribonuclease III Xth [Verrucosispora maris AB-18-032] Length = 265 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 76/257 (29%), Positives = 126/257 (49%), Gaps = 2/257 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS++AR+ L W+ PD++CLQETK D FP + L Y + + Sbjct: 1 MRLATWNVNSVKARLPRLLDWLAGTEPDVVCLQETKCPDGAFPVAEVGDLGYTVASHSDG 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVAILS+ ++ PG+ + T + +R+ ++Y+P+G Sbjct: 61 RWNGVAILSRIGLSDVTVGFPGEPGFPEPEARAIAATCDG--VRVWSVYVPNGRTPDDPH 118 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K++W+ L L GD+N+ P D ++P ++ T R + Sbjct: 119 YAYKLAWLAALRDALDAELTDGRALAVCGDFNVAPTDDDVWDPALFATSTHVTPAERAAL 178 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 L+++G D + H +++WDY A + +NKG+RID + S + SA +D Sbjct: 179 AALRDLGLVDVVPTPMKGPHPFTYWDYRAGMFHQNKGMRIDLVYASAPFARTVSSAYVDR 238 Query: 244 KPRGWTKPSDHTPVIVS 260 + R PSDH P++V Sbjct: 239 EARKGRSPSDHAPIVVD 255 >gi|227820280|ref|YP_002824251.1| exonuclease [Sinorhizobium fredii NGR234] gi|227339279|gb|ACP23498.1| probable exonuclease [Sinorhizobium fredii NGR234] Length = 257 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 88/259 (33%), Positives = 141/259 (54%), Gaps = 3/259 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+N+N + R+ NL AW+ PD++CLQE K D FP +++ Y GQ Sbjct: 1 MKIATFNINGVNKRLENLLAWLDAAEPDVVCLQELKATDGQFPKSAIEAAGYGAVWRGQS 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 ++NGVAIL++ + + + + I LY P+GNP K Sbjct: 61 AWNGVAILARDSEPVLTR---TELPGDPSDTQSRYIEAAVNGILIAALYAPNGNPQPGPK 117 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 +D K++W +R A++ LE P++ AGDYNI+P+P D Y ++++A E R +F Sbjct: 118 FDYKLAWHRRLAGHAAELLETGLPVVLAGDYNIVPEPRDIYPTRSYDDNALVQPESRAAF 177 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 ++L + G+ DA+R + L++FWDY + W +N G+R+DHI+LS + L ID Sbjct: 178 RQLLDQGWLDALRKVYPDEELFTFWDYRRNRWQRNAGLRLDHILLSRKLARRLTGGGIDR 237 Query: 244 KPRGWTKPSDHTPVIVSLD 262 RG SDH PV ++L+ Sbjct: 238 DVRGQENASDHAPVWIALE 256 >gi|238561644|ref|ZP_00441777.2| exodeoxyribonuclease III [Burkholderia mallei GB8 horse 4] gi|254200314|ref|ZP_04906680.1| exodeoxyribonuclease III [Burkholderia mallei FMH] gi|254209389|ref|ZP_04915735.1| exodeoxyribonuclease III [Burkholderia mallei JHU] gi|147749910|gb|EDK56984.1| exodeoxyribonuclease III [Burkholderia mallei FMH] gi|147750162|gb|EDK57233.1| exodeoxyribonuclease III [Burkholderia mallei JHU] gi|238524267|gb|EEP87701.1| exodeoxyribonuclease III [Burkholderia mallei GB8 horse 4] Length = 269 Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats. Identities = 87/258 (33%), Positives = 134/258 (51%), Gaps = 1/258 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ R ++ W+ +++ D++CLQE K D+ FP E L++ Y GQK Sbjct: 12 MRIATWNVNSLNVRKQHVLDWLAQSDVDVLCLQELKIPDEKFPREALEAAGYRSWFAGQK 71 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAIL++ T + + + +RI + Y P+G + S K Sbjct: 72 TYNGVAILARASLPFDETDIVRNIPGFEDAQQRLIAATIDG-VRIVSAYFPNGQALDSDK 130 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W+ + L+ L GDYNI P+ D ++P WE + + R F Sbjct: 131 FVYKMQWLDALQAWLKDELQRYPKLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHF 190 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +L +GF DA R +++WDY ++ +N G+RIDHI+LSP S +D Sbjct: 191 AQLVALGFVDAFRRFEQPEKTFTWWDYRMLAFRRNAGLRIDHILLSPALAETCTSCTVDR 250 Query: 244 KPRGWTKPSDHTPVIVSL 261 PR W +PSDHTPV+ L Sbjct: 251 VPRTWEQPSDHTPVVAQL 268 >gi|312113058|ref|YP_004010654.1| exodeoxyribonuclease III Xth [Rhodomicrobium vannielii ATCC 17100] gi|311218187|gb|ADP69555.1| exodeoxyribonuclease III Xth [Rhodomicrobium vannielii ATCC 17100] Length = 262 Score = 210 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 128/260 (49%), Positives = 167/260 (64%), Gaps = 1/260 (0%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 ++TVATWNVNSI+ R W+K PD++CLQE K + + FP + L Y+ GQ Sbjct: 1 MLTVATWNVNSIKQREIAAVQWLKRARPDVLCLQEIKCQTEAFPRGAFEDLGYNCAVIGQ 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT-LRIGNLYLPHGNPITS 121 KS+NGVAILSK+ E V LPGDD D Q+R+IEA ++ R+ ++Y P+GNP+ S Sbjct: 61 KSFNGVAILSKFPIDETVVGLPGDDTDEQSRYIEAVLSLPGGGAFRVASVYAPNGNPVAS 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 K D K+ W+ RF A L EEP AGDYNIIP+ D YNP W DA + LE RQ Sbjct: 121 PKLDYKLEWLARFKAHAETLLSYEEPFALAGDYNIIPRGIDVYNPAAWTEDALYRLESRQ 180 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +F+++ N+G DA+ A + ++FWDY A +W KN G+RIDHI+LSP+A S L S I Sbjct: 181 AFRRILNLGLADAVEACNSGGGQFTFWDYQAGAWQKNLGLRIDHILLSPQAFSRLRSTVI 240 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 D PR W KPSDHTPV V+L Sbjct: 241 DRTPRSWDKPSDHTPVQVTL 260 >gi|254447579|ref|ZP_05061045.1| exodeoxyribonuclease III [gamma proteobacterium HTCC5015] gi|198262922|gb|EDY87201.1| exodeoxyribonuclease III [gamma proteobacterium HTCC5015] Length = 261 Score = 210 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 85/258 (32%), Positives = 136/258 (52%), Gaps = 2/258 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A+WNVNS++ R+ + W+++ N D++CLQETK D FP ++ Y + GQK Sbjct: 1 MKIASWNVNSLKVRLPYVLDWLEQTNTDVLCLQETKLTDDKFPDLAIEEAGYEVAFSGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAIL K + + V + TI +R+ +LY+ +G + S K Sbjct: 61 TYNGVAILLKKNAASLRDVVTDVPGLVDPQRRIMAATIGD--VRVIDLYVVNGKEVGSDK 118 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 YD K+ W+K+ + Q+ + E LI GD+NI P+ D Y+PI W + R + Sbjct: 119 YDYKLHWLKKVGDYIEQQSQQYEKLIVLGDFNIAPEDEDVYDPIAWSEKILCSTPERDAL 178 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +++++ G D R + YS+WD+ + +G+RID I+ S +L ID Sbjct: 179 KRIKDNGLKDCFRMLNQDSGEYSWWDFRTKGFENGRGLRIDLILASEALQKVLKGCWIDR 238 Query: 244 KPRGWTKPSDHTPVIVSL 261 +PR KPSDH PV+ Sbjct: 239 QPRAGEKPSDHAPVVAEF 256 >gi|254561142|ref|YP_003068237.1| exodeoxyribonuclease III [Methylobacterium extorquens DM4] gi|254268420|emb|CAX24377.1| Exodeoxyribonuclease III (Exonuclease III) (EXO III) (AP endonuclease VI) [Methylobacterium extorquens DM4] Length = 264 Score = 210 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 115/261 (44%), Positives = 161/261 (61%), Gaps = 3/261 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + TWNVNSI+ R+ +L ++ E PD++CLQE K +D +FP E +++ Y +ET GQK Sbjct: 1 MRITTWNVNSIKQRVGHLLGFLDEAKPDVVCLQELKCQDASFPREEIEAAGYAVETLGQK 60 Query: 64 SYNGVAILSKYQPIEIV--THLPGDDLDVQARFIEATFTINTQ-TLRIGNLYLPHGNPIT 120 +YNGVA+L + LPGD D QAR+IEA +R+ ++YLP+GNP Sbjct: 61 AYNGVALLVRAPLQYTQLLRGLPGDAEDEQARYIEALVHGEGVAPVRVASIYLPNGNPAP 120 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 KY K++++ R A + EE L+ AGD+N+IP+P D +P W DA F E R Sbjct: 121 GPKYSYKLAFMARLRTHARALMTTEEALVLAGDFNVIPEPEDAADPTAWTQDALFLPETR 180 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 ++F+ L GFTD +RA + LY+FWDY A W +N+GIRIDH++LSP+A L SA Sbjct: 181 RAFRALVAEGFTDGLRACEPSAGLYTFWDYQAGCWPRNQGIRIDHLLLSPQAADRLVSAS 240 Query: 241 IDTKPRGWTKPSDHTPVIVSL 261 + RG KPSDH PV V L Sbjct: 241 VQRHLRGLEKPSDHVPVTVEL 261 >gi|238028045|ref|YP_002912276.1| exodeoxyribonuclease III xth [Burkholderia glumae BGR1] gi|237877239|gb|ACR29572.1| Exodeoxyribonuclease III xth [Burkholderia glumae BGR1] Length = 258 Score = 210 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 82/256 (32%), Positives = 127/256 (49%), Gaps = 1/256 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ R ++ W+ + D++CLQE K D+ FP L++ Y GQK Sbjct: 1 MKIATWNVNSLNVRKQHVLDWLASSQTDVLCLQELKLPDEKFPKADLEAAGYRSWFTGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAIL + + + ++ + +RI + Y P+G + K Sbjct: 61 TYNGVAILVRDT-LGVDETDVVKNIPGFEDAQQRVIAATVNGVRIVSAYFPNGQAPGTDK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W+ + L L GDYNI P+ D ++P WE + + R F Sbjct: 120 FAYKMQWLDALQAWLKDELARHPKLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 L MG DA R +++WDY + +N G+RIDHI+LSP + L + +D Sbjct: 180 AALLGMGLVDAFRRFEQPEKTFTWWDYRMLGFRRNAGLRIDHILLSPALATTLRACEVDR 239 Query: 244 KPRGWTKPSDHTPVIV 259 +PRGW +PSDH P+ Sbjct: 240 EPRGWEQPSDHAPIFA 255 >gi|270159292|ref|ZP_06187948.1| exodeoxyribonuclease III [Legionella longbeachae D-4968] gi|289165884|ref|YP_003456022.1| exodeoxyribonuclease III XthA [Legionella longbeachae NSW150] gi|269987631|gb|EEZ93886.1| exodeoxyribonuclease III [Legionella longbeachae D-4968] gi|288859057|emb|CBJ12986.1| putative exodeoxyribonuclease III XthA [Legionella longbeachae NSW150] Length = 259 Score = 210 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 94/263 (35%), Positives = 155/263 (58%), Gaps = 5/263 (1%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 ++ +A+WNVNS++ R+ + +W+ ++ DI+ +QETK D NFP + YH+ GQ Sbjct: 1 MIKLASWNVNSLKVRLEQVISWLDSSHVDILAIQETKLIDDNFPRAVFEEKGYHVVFSGQ 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K+YNGVAI+S+Y +++T +P D + + R+ NLY+P+G+ +TS Sbjct: 61 KTYNGVAIISRYPFSDVLTDIPDLDDPQRRIL-----IVTVAGFRLINLYVPNGSELTSD 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 KY K+ W+++ F Q++ + + GD+NI P+ D ++PI WE + R + Sbjct: 116 KYQYKLDWLQKVTNFIQQQINIYSKIAVVGDFNIAPEDRDVHDPIAWEGSVLVSPAERNA 175 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F +L +GF D+ R +S+WDY A ++ +N+G+RIDHI+LS E L + ID Sbjct: 176 FVQLLQLGFHDSFRNFVQEDQSFSWWDYRAAAFRRNRGLRIDHILLSKELNHLCTQSVID 235 Query: 243 TKPRGWTKPSDHTPVIVSLDIPE 265 +PR +PSDH PV V+L++ E Sbjct: 236 KEPRKVERPSDHAPVWVALELSE 258 >gi|53724173|ref|YP_103357.1| exodeoxyribonuclease III [Burkholderia mallei ATCC 23344] gi|121601562|ref|YP_993558.1| exodeoxyribonuclease III [Burkholderia mallei SAVP1] gi|124384052|ref|YP_001029013.1| exodeoxyribonuclease III [Burkholderia mallei NCTC 10229] gi|126440535|ref|YP_001059656.1| exodeoxyribonuclease III [Burkholderia pseudomallei 668] gi|126449755|ref|YP_001081066.1| exodeoxyribonuclease III [Burkholderia mallei NCTC 10247] gi|126452052|ref|YP_001066939.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1106a] gi|134277971|ref|ZP_01764686.1| exodeoxyribonuclease III [Burkholderia pseudomallei 305] gi|167003440|ref|ZP_02269226.1| exodeoxyribonuclease III [Burkholderia mallei PRL-20] gi|167720390|ref|ZP_02403626.1| exodeoxyribonuclease III [Burkholderia pseudomallei DM98] gi|167739381|ref|ZP_02412155.1| exodeoxyribonuclease III [Burkholderia pseudomallei 14] gi|167816592|ref|ZP_02448272.1| exodeoxyribonuclease III [Burkholderia pseudomallei 91] gi|167846507|ref|ZP_02472015.1| exodeoxyribonuclease III [Burkholderia pseudomallei B7210] gi|167895086|ref|ZP_02482488.1| exodeoxyribonuclease III [Burkholderia pseudomallei 7894] gi|167903470|ref|ZP_02490675.1| exodeoxyribonuclease III [Burkholderia pseudomallei NCTC 13177] gi|167911721|ref|ZP_02498812.1| exodeoxyribonuclease III [Burkholderia pseudomallei 112] gi|167919720|ref|ZP_02506811.1| exodeoxyribonuclease III [Burkholderia pseudomallei BCC215] gi|217421040|ref|ZP_03452545.1| exodeoxyribonuclease III [Burkholderia pseudomallei 576] gi|237813050|ref|YP_002897501.1| exodeoxyribonuclease III [Burkholderia pseudomallei MSHR346] gi|242317870|ref|ZP_04816886.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1106b] gi|254178518|ref|ZP_04885173.1| exodeoxyribonuclease III [Burkholderia mallei ATCC 10399] gi|254184341|ref|ZP_04890931.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1655] gi|254191371|ref|ZP_04897875.1| exodeoxyribonuclease III [Burkholderia pseudomallei Pasteur 52237] gi|254195861|ref|ZP_04902287.1| exodeoxyribonuclease III [Burkholderia pseudomallei S13] gi|254261312|ref|ZP_04952366.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1710a] gi|254297001|ref|ZP_04964454.1| exodeoxyribonuclease III [Burkholderia pseudomallei 406e] gi|254357938|ref|ZP_04974211.1| exodeoxyribonuclease III [Burkholderia mallei 2002721280] gi|52427596|gb|AAU48189.1| exodeoxyribonuclease III [Burkholderia mallei ATCC 23344] gi|121230372|gb|ABM52890.1| exodeoxyribonuclease III [Burkholderia mallei SAVP1] gi|124292072|gb|ABN01341.1| exodeoxyribonuclease III [Burkholderia mallei NCTC 10229] gi|126220028|gb|ABN83534.1| exodeoxyribonuclease III [Burkholderia pseudomallei 668] gi|126225694|gb|ABN89234.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1106a] gi|126242625|gb|ABO05718.1| exodeoxyribonuclease III [Burkholderia mallei NCTC 10247] gi|134251621|gb|EBA51700.1| exodeoxyribonuclease III [Burkholderia pseudomallei 305] gi|148027065|gb|EDK85086.1| exodeoxyribonuclease III [Burkholderia mallei 2002721280] gi|157807529|gb|EDO84699.1| exodeoxyribonuclease III [Burkholderia pseudomallei 406e] gi|157939043|gb|EDO94713.1| exodeoxyribonuclease III [Burkholderia pseudomallei Pasteur 52237] gi|160699557|gb|EDP89527.1| exodeoxyribonuclease III [Burkholderia mallei ATCC 10399] gi|169652606|gb|EDS85299.1| exodeoxyribonuclease III [Burkholderia pseudomallei S13] gi|184214872|gb|EDU11915.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1655] gi|217396452|gb|EEC36469.1| exodeoxyribonuclease III [Burkholderia pseudomallei 576] gi|237503790|gb|ACQ96108.1| exodeoxyribonuclease III [Burkholderia pseudomallei MSHR346] gi|242141109|gb|EES27511.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1106b] gi|243061042|gb|EES43228.1| exodeoxyribonuclease III [Burkholderia mallei PRL-20] gi|254220001|gb|EET09385.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1710a] Length = 258 Score = 210 bits (533), Expect = 2e-52, Method: Composition-based stats. Identities = 87/258 (33%), Positives = 134/258 (51%), Gaps = 1/258 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ R ++ W+ +++ D++CLQE K D+ FP E L++ Y GQK Sbjct: 1 MRIATWNVNSLNVRKQHVLDWLAQSDVDVLCLQELKIPDEKFPREALEAAGYRSWFAGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAIL++ T + + + +RI + Y P+G + S K Sbjct: 61 TYNGVAILARASLPFDETDIVRNIPGFEDAQQRLIAATIDG-VRIVSAYFPNGQALDSDK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W+ + L+ L GDYNI P+ D ++P WE + + R F Sbjct: 120 FVYKMQWLDALQAWLKDELQRYPKLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +L +GF DA R +++WDY ++ +N G+RIDHI+LSP S +D Sbjct: 180 AQLVALGFVDAFRRFEQPEKTFTWWDYRMLAFRRNAGLRIDHILLSPALAETCTSCTVDR 239 Query: 244 KPRGWTKPSDHTPVIVSL 261 PR W +PSDHTPV+ L Sbjct: 240 VPRTWEQPSDHTPVVAQL 257 >gi|149185250|ref|ZP_01863567.1| hypothetical protein ED21_19392 [Erythrobacter sp. SD-21] gi|148831361|gb|EDL49795.1| hypothetical protein ED21_19392 [Erythrobacter sp. SD-21] Length = 265 Score = 210 bits (533), Expect = 3e-52, Method: Composition-based stats. Identities = 99/261 (37%), Positives = 149/261 (57%), Gaps = 1/261 (0%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + +AT+N+N I+AR+ L W++E P + CLQE KT D+ FP E + + Y G Sbjct: 3 ASMKIATFNINGIKARLPRLLEWLEETRPTVACLQEIKTMDEGFPAEEFEKIGYQAIWHG 62 Query: 62 QKSYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 QKS+NGVAILS +P+EI L D +RI NLYLP+GNP Sbjct: 63 QKSFNGVAILSDGTKPVEIQRGLDIDGPKEGEGEQARYLEAEVNGIRICNLYLPNGNPHP 122 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 K+D K++W+++ +Q E P + GD+N+IP+ D ++P +DA E R Sbjct: 123 GPKFDYKLAWMEKLRGRMAQIWAEEVPAVVLGDFNVIPEDKDVWSPKAMASDALMQPESR 182 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 ++++ G+TDAI + ++++WDY A +W ++ G RIDH++LSPE + SA Sbjct: 183 DAYRRFLANGWTDAIDTLNPRGGVWTYWDYQAGAWQRDHGFRIDHLLLSPETADRMVSAG 242 Query: 241 IDTKPRGWTKPSDHTPVIVSL 261 +D + RG K SDHTPV V L Sbjct: 243 VDKEYRGREKSSDHTPVWVEL 263 >gi|300115398|ref|YP_003761973.1| exodeoxyribonuclease III [Nitrosococcus watsonii C-113] gi|299541335|gb|ADJ29652.1| exodeoxyribonuclease III [Nitrosococcus watsonii C-113] Length = 254 Score = 210 bits (533), Expect = 3e-52, Method: Composition-based stats. Identities = 90/258 (34%), Positives = 141/258 (54%), Gaps = 5/258 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+R R + W++ + PD + LQETK D+NFP E + + YH GQK Sbjct: 1 MKIATWNVNSLRVRFSQVVDWLEIHQPDALALQETKLVDENFPQEAFKDIGYHAVYSGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAIL + +P +I+T LP + + + + NLY+P+G+ + S K Sbjct: 61 TYNGVAILCRQEPKDILTDLPNLVDSQRRIL-----GVTLDDIHVLNLYVPNGSEVGSEK 115 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W+ R + + L LI GD+N+ P D Y+P +W + R++ Sbjct: 116 YAYKLDWLGRIKDYLQEALVEYPKLIVLGDFNVAPADQDVYDPEVWHETILCSTPEREAL 175 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q++ +GF D+ R +S+WDY ++ +N+G+RID I++S S ID Sbjct: 176 QEILALGFQDSFRLFEQQAQSFSWWDYRGGAFHRNRGLRIDLILISKALVSKCMGCVIDK 235 Query: 244 KPRGWTKPSDHTPVIVSL 261 +PR +PSDH PVI + Sbjct: 236 EPRRLPRPSDHAPVIATF 253 >gi|326316303|ref|YP_004233975.1| exodeoxyribonuclease III [Acidovorax avenae subsp. avenae ATCC 19860] gi|323373139|gb|ADX45408.1| exodeoxyribonuclease III [Acidovorax avenae subsp. avenae ATCC 19860] Length = 258 Score = 210 bits (533), Expect = 3e-52, Method: Composition-based stats. Identities = 90/258 (34%), Positives = 139/258 (53%), Gaps = 1/258 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ R+ + AW+ +N D I LQE K D+ FP + ++ YH T GQK Sbjct: 1 MKLATWNVNSLSVRLPQVLAWLADNPVDAIGLQELKLVDEKFPHDAFEAAGYHAVTFGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAILS+ ++V ++PG + T LR N Y +G + K Sbjct: 61 TYNGVAILSRAPVRDVVRNIPGHEDAQARVIAATLDTPQGP-LRFINCYFVNGQAPGTEK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W+ R+ + L L+ GD+N+ P+ D ++P+ ++ T+E R F Sbjct: 120 FAYKMLWLDALHRWVREELLAHPRLVLVGDFNVAPEDRDSFDPVGLKDTIHHTVEERTHF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q L +G TDA R +S+WDY + KN+G+RIDHI++S + + ID Sbjct: 180 QSLLQLGLTDAYRMFDQPEKSFSWWDYRMLGFQKNRGLRIDHILVSEALRGQVTACTIDR 239 Query: 244 KPRGWTKPSDHTPVIVSL 261 +PR +PSDH PV+ +L Sbjct: 240 QPRKNPQPSDHAPVVATL 257 >gi|282901543|ref|ZP_06309465.1| Exodeoxyribonuclease III xth [Cylindrospermopsis raciborskii CS-505] gi|281193586|gb|EFA68561.1| Exodeoxyribonuclease III xth [Cylindrospermopsis raciborskii CS-505] Length = 260 Score = 210 bits (533), Expect = 3e-52, Method: Composition-based stats. Identities = 90/259 (34%), Positives = 138/259 (53%), Gaps = 2/259 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSIR R+ + +W+ ENN D++CLQETK D +FP + YH GQK Sbjct: 1 MKIATWNVNSIRTRLGQVISWLGENNVDVLCLQETKVIDTDFPLTVFHDMGYHTYIYGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT--QTLRIGNLYLPHGNPITS 121 +YNGVA++S+ + T +++ + + I +RI NLY+P+G+ + S Sbjct: 61 AYNGVALISRQPMKSVSTGFCQVLENLEPEWDDQKRVITGIVDKVRIINLYVPNGSAVGS 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 KY K+ W+ + L+ +I GD+NI + D Y + EN +L R+ Sbjct: 121 EKYQYKLQWLAVLKTYLEVLLKSNSDVIMCGDFNIALEDIDIYKQVDTENQIMASLLERK 180 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 + +++ N+GF D R + YS+WDY ++ +N G RIDH L+ S I Sbjct: 181 ALREILNLGFGDGFRKFNSQGGNYSWWDYRTGAFKRNSGWRIDHHYLTDVLYKQAKSCLI 240 Query: 242 DTKPRGWTKPSDHTPVIVS 260 D PR +PSDH PV+V Sbjct: 241 DISPRKLEQPSDHAPVVVE 259 >gi|159903026|ref|YP_001550370.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9211] gi|159888202|gb|ABX08416.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9211] Length = 277 Score = 210 bits (533), Expect = 3e-52, Method: Composition-based stats. Identities = 95/273 (34%), Positives = 148/273 (54%), Gaps = 4/273 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSIR RI + A++ E NPD++CLQETK ED +FP + + +YH+ GQK Sbjct: 1 MLIATWNVNSIRTRISQVEAFLSEVNPDLLCLQETKVEDASFPTKIFEDKDYHLSFFGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT----INTQTLRIGNLYLPHGNPI 119 +YNGVA++SK ++ + G+ + +RI N+Y+P+G+ + Sbjct: 61 AYNGVALISKSPLKDVRFGMSGELSNNPEAQYLDEQKRVISTLLNGVRIINVYVPNGSSL 120 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 TS KY+ K+ W+ + + E +EP+ GD+NI + D +NP + Sbjct: 121 TSDKYEYKLQWLNCLKNYLDCQSERDEPICLLGDFNIALEDKDIHNPNRLSGGIMASEPE 180 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R++ +KL D R + +S+WDY + +W +++G RIDHI LS E + S Sbjct: 181 RKALRKLLGERLEDIFRIFEQGTNHWSWWDYRSGAWDRDRGWRIDHIYLSKELINHSKSC 240 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQD 272 I K RG KPSDH PV+V +D P ++ Sbjct: 241 VIHKKSRGNIKPSDHAPVLVEIDWPSQESNEEP 273 >gi|320007613|gb|ADW02463.1| exodeoxyribonuclease III Xth [Streptomyces flavogriseus ATCC 33331] Length = 260 Score = 210 bits (533), Expect = 3e-52, Method: Composition-based stats. Identities = 78/260 (30%), Positives = 129/260 (49%), Gaps = 1/260 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSI AR+ L AW++ + D++C+QETK + FP + L+ Y Sbjct: 1 MRIATWNVNSITARLPRLLAWLESSGTDVLCIQETKCTLEQFPTDALREAGYESAVNATG 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVA+LS+ ++VT LPG + A R+ ++Y+P+G + Sbjct: 61 RWNGVAVLSRVGLTDVVTGLPGGPEYDGVQEPRAVSATCGGA-RVWSVYVPNGREVAHEH 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W++ + P GDYNI P D ++P ++E T R++ Sbjct: 120 YAYKLRWLEALREAVAADAAGTLPFAVLGDYNIAPTDEDVWDPAVFEGATHVTPAEREAL 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 L+ G +D + YS+WDY ++ KN+G+RID + + + + + +D Sbjct: 180 AALRGTGLSDVVPRPLKYDRPYSYWDYRQLAFPKNRGMRIDLVYGNAPFAAAVKDSYVDR 239 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 + R SDH PV+V LD+ Sbjct: 240 EERKGKGASDHAPVVVDLDV 259 >gi|163851383|ref|YP_001639426.1| exodeoxyribonuclease III Xth [Methylobacterium extorquens PA1] gi|163662988|gb|ABY30355.1| exodeoxyribonuclease III Xth [Methylobacterium extorquens PA1] Length = 264 Score = 210 bits (533), Expect = 3e-52, Method: Composition-based stats. Identities = 115/261 (44%), Positives = 162/261 (62%), Gaps = 3/261 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + TWNVNSI+ R+ +L ++ E PD++CLQE K +D +FP E +++ Y +ET GQK Sbjct: 1 MRITTWNVNSIKQRVGHLLGFLDEAKPDVVCLQELKCQDASFPREEIEAAGYAVETLGQK 60 Query: 64 SYNGVAILSKYQPIEIV--THLPGDDLDVQARFIEATFTINTQ-TLRIGNLYLPHGNPIT 120 +YNGVA+L + LPGD D QAR+IEA +R+ ++YLP+GNP Sbjct: 61 AYNGVALLVRAPLQYTQLLRGLPGDAEDEQARYIEALVHGEGVAPVRVASIYLPNGNPAP 120 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 KY K++++ R A + EE L+ AGD+N+IP+P D +P +W DA F E R Sbjct: 121 GPKYSYKLAFMARLRSHARALMTTEEALVLAGDFNVIPEPEDAADPTVWTQDALFLPETR 180 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 ++F+ L GFTD +RA + LY+FWDY A W +N+GIRIDH++LSP+A L SA Sbjct: 181 RAFRALLAEGFTDGLRACEPSAGLYTFWDYQAGCWPRNQGIRIDHLLLSPQAADRLVSAS 240 Query: 241 IDTKPRGWTKPSDHTPVIVSL 261 + RG KPSDH PV V L Sbjct: 241 VQRHLRGLEKPSDHVPVTVEL 261 >gi|218530191|ref|YP_002421007.1| exodeoxyribonuclease III Xth [Methylobacterium chloromethanicum CM4] gi|218522494|gb|ACK83079.1| exodeoxyribonuclease III Xth [Methylobacterium chloromethanicum CM4] Length = 264 Score = 210 bits (533), Expect = 3e-52, Method: Composition-based stats. Identities = 115/261 (44%), Positives = 162/261 (62%), Gaps = 3/261 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + TWNVNSI+ R+ +L ++ E PD++CLQE K +D +FP E +++ Y +ET GQK Sbjct: 1 MRITTWNVNSIKQRVGHLLGFLDEAKPDVVCLQELKCQDASFPREEIEAAGYAVETLGQK 60 Query: 64 SYNGVAILSKYQPIEIV--THLPGDDLDVQARFIEATFTINTQ-TLRIGNLYLPHGNPIT 120 +YNGVA+L + LPGD D QAR+IEA +R+ ++YLP+GNP Sbjct: 61 AYNGVALLVRAPLQYTQLLRGLPGDAEDEQARYIEALVHGEGVAPVRVASIYLPNGNPAP 120 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 KY K++++ R A + EE L+ AGD+N+IP+P D +P +W DA F E R Sbjct: 121 GPKYSYKLAFMARLRAHARALMTTEEALVLAGDFNVIPEPEDAADPSVWTQDALFLPEPR 180 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 ++F+ L GFTD +RA + LY+FWDY A W +N+GIRIDH++LSP+A L SA Sbjct: 181 RAFRALLAEGFTDGLRACEPSAGLYTFWDYQAGCWPRNQGIRIDHLLLSPQAADRLVSAS 240 Query: 241 IDTKPRGWTKPSDHTPVIVSL 261 + RG KPSDH PV V L Sbjct: 241 VQRHLRGLEKPSDHVPVTVEL 261 >gi|238788459|ref|ZP_04632252.1| Exodeoxyribonuclease III [Yersinia frederiksenii ATCC 33641] gi|238723372|gb|EEQ15019.1| Exodeoxyribonuclease III [Yersinia frederiksenii ATCC 33641] Length = 271 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 86/271 (31%), Positives = 133/271 (49%), Gaps = 8/271 (2%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 M + ++N+N +RAR H LAA I+++ PD+I LQETK D FP E + YH+ Sbjct: 1 MLTMKFVSFNINGLRARPHQLAAIIEQHQPDVIGLQETKVHDDMFPLEDVSQHGYHVFYH 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 GQK + GVA+L+K +P+ + P D+ D Q R I A TL + N Y P G Sbjct: 61 GQKGHYGVALLTKQEPLAVRRGFPSDEEDAQRRIIMADIATPQGTLTVINGYFPQGESRD 120 Query: 121 ST-KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDA 173 K+ K + ++ Q+L + ++ GD NI P + + Sbjct: 121 HPTKFPAKERFYADLQQYLEQQLSADAQILIMGDLNISPTDLDIGIGEESRKRWLRTGKC 180 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 F E R ++LQ+ G D RA + + +S++DY + + +N+G+RID ++ S Sbjct: 181 SFLPEERAWLERLQSWGLVDTFRAANPDCNDQFSWFDYRSRGFDENRGLRIDLLLASQPL 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + + ID K RG KPSDH PV + Sbjct: 241 AARCIATGIDYKIRGMEKPSDHAPVWSEFAL 271 >gi|260220884|emb|CBA28896.1| hypothetical protein Csp_A09430 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 257 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 83/258 (32%), Positives = 134/258 (51%), Gaps = 5/258 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+NS+ R+ + W+ N D++ LQE K D FP + +++ YH + GQK Sbjct: 1 MKLATWNINSLGVRLPQVLDWLAANPVDVLALQELKLTDDKFPADAFEAIGYHAQWFGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVA+LS+ +++ ++PG D D+ T +R+ Y P+G S K Sbjct: 61 TYNGVALLSRTPASDVIKNIPGFDDDMSRVI-----TGTVDGVRVIGAYFPNGQEPGSDK 115 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 ++ K+ W+ R+ L L+ GDYNI D ++P+ E T E R Sbjct: 116 FEYKMEWLSALRRWVKDELATHPNLVLMGDYNITFDEDDVWDPVNLEGTIHCTEEERYHL 175 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + L +G D+ R +S+WDY + +N+G+RIDHI++S + + ID Sbjct: 176 RALIALGLCDSYRLFPYPPKSFSWWDYRDAGFRRNRGLRIDHILVSNALKPQVTACTIDK 235 Query: 244 KPRGWTKPSDHTPVIVSL 261 PR +PSDH PV+V + Sbjct: 236 TPRKNERPSDHAPVVVDI 253 >gi|240138546|ref|YP_002963018.1| Exodeoxyribonuclease III (Exonuclease III) (EXO III) (AP endonuclease VI) [Methylobacterium extorquens AM1] gi|240008515|gb|ACS39741.1| Exodeoxyribonuclease III (Exonuclease III) (EXO III) (AP endonuclease VI) [Methylobacterium extorquens AM1] Length = 264 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 115/261 (44%), Positives = 162/261 (62%), Gaps = 3/261 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + TWNVNSI+ R+ +L ++ E PD++CLQE K +D +FP E +++ Y +ET GQK Sbjct: 1 MRITTWNVNSIKQRVGHLLGFLDEAKPDVVCLQELKCQDASFPREEIEAAGYAVETLGQK 60 Query: 64 SYNGVAILSKYQPIEIV--THLPGDDLDVQARFIEATFTINTQ-TLRIGNLYLPHGNPIT 120 +YNGVA+L + LPGD D QAR+IEA +R+ ++YLP+GNP Sbjct: 61 AYNGVALLVRAPLQYTQLLRGLPGDAEDEQARYIEALVHGEGVAPVRVASIYLPNGNPAP 120 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 KY K++++ R A + EE L+ AGD+N+IP+P D +P +W DA F E R Sbjct: 121 GPKYSYKLAFMARLRSHARALMTTEEALVLAGDFNVIPEPEDAADPSVWTQDALFLPETR 180 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 ++F+ L GFTD +RA + LY+FWDY A W +N+GIRIDH++LSP+A L SA Sbjct: 181 RAFRALLAEGFTDGLRACEPSAGLYTFWDYQAGCWPRNQGIRIDHLLLSPQAADRLVSAS 240 Query: 241 IDTKPRGWTKPSDHTPVIVSL 261 + RG KPSDH PV V L Sbjct: 241 VQRHLRGLEKPSDHVPVTVEL 261 >gi|37680518|ref|NP_935127.1| exonuclease III [Vibrio vulnificus YJ016] gi|37199266|dbj|BAC95098.1| exodeoxyribonuclease III [Vibrio vulnificus YJ016] Length = 268 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 84/268 (31%), Positives = 138/268 (51%), Gaps = 9/268 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +RAR+H L A I ++ PD+I LQE K D+ FP E ++++ Y + GQK Sbjct: 1 MKIVSFNINGLRARLHQLQALIDKHQPDVIGLQEIKVHDEAFPIEDVEAMGYKVYFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITS- 121 ++ GVA+L K +PIEI P D+ + Q R I TF + + + N Y P G+ I Sbjct: 61 AHYGVALLCKQEPIEIQKGFPTDNDEHQKRMIIGTFLDEKGEKVTVLNGYFPQGDNIAHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175 TK+ K + + + + + + E ++ GD NI P D + F Sbjct: 121 TKFPYKRQFYQDLMGYLTTHRDNGEQVVVMGDINISPIDADIGIGEVNRKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R+ Q L + G D R H + +S++DY + + N+G+RID I+ +P + Sbjct: 181 QPEEREWLQTLLDWGLEDTFRKLHPSVDDKFSWFDYRSKGFDDNRGLRIDVILATPSLAT 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + ID + RG KPSDH P+ + + Sbjct: 241 KCRESDIDYELRGIEKPSDHAPIWATFE 268 >gi|288549534|ref|ZP_05967343.2| exodeoxyribonuclease III [Enterobacter cancerogenus ATCC 35316] gi|288318297|gb|EFC57235.1| exodeoxyribonuclease III [Enterobacter cancerogenus ATCC 35316] Length = 354 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 81/270 (30%), Positives = 126/270 (46%), Gaps = 8/270 (2%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + ++N+N +RAR H L A ++++ PD+I LQETK D FP E + L Y++ G Sbjct: 85 ATMKFVSFNINGLRARPHQLEAIVEQHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHG 144 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 QK + GVA+L+K P+ + PGDD + Q R I A + + N Y P G Sbjct: 145 QKGHYGVALLTKETPVSVRRGFPGDDGEAQRRIIMAEIPSPLGNITVINGYFPQGESRDH 204 Query: 122 T-KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDAC 174 K+ K + + + + L E P++ GD NI P + + Sbjct: 205 PTKFPAKAKFYQDLQDYLTAELNKENPVLIMGDVNISPTDLDIGIGEESRKRWLRTGKCS 264 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 F E R+ ++L G D RA + +S++DY + + N+G+RID ++ S Sbjct: 265 FLPEEREWMERLIGWGLVDTFRAANPDTQDRFSWFDYRSKGFDDNRGLRIDLLLASAPLA 324 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 ID RG KPSDH PV + Sbjct: 325 ERCIETGIDYDIRGMEKPSDHAPVWAKFKL 354 >gi|53719925|ref|YP_108911.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei K96243] gi|167824992|ref|ZP_02456463.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 9] gi|226195468|ref|ZP_03791056.1| exodeoxyribonuclease III [Burkholderia pseudomallei Pakistan 9] gi|52210339|emb|CAH36318.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei K96243] gi|225932428|gb|EEH28427.1| exodeoxyribonuclease III [Burkholderia pseudomallei Pakistan 9] Length = 258 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 87/258 (33%), Positives = 134/258 (51%), Gaps = 1/258 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ R ++ W+ +++ D++CLQE K D+ FP E L++ Y GQK Sbjct: 1 MRIATWNVNSLNVRKQHVLDWLAQSDVDVLCLQELKIPDEKFPREALEAAGYRSWFAGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAIL++ T + + + +RI + Y P+G + S K Sbjct: 61 TYNGVAILARASLPFDETDIVRNIPGFEDAQQRLIAATIDG-VRIVSAYFPNGQALDSDK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W+ + L+ L GDYNI P+ D ++P WE + + R F Sbjct: 120 FVYKMQWLDALRAWLKDELQRYPKLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +L +GF DA R +++WDY ++ +N G+RIDHI+LSP S +D Sbjct: 180 AQLVALGFVDAFRRFEQPEKTFTWWDYRMLAFRRNAGLRIDHILLSPALAETCTSCTVDR 239 Query: 244 KPRGWTKPSDHTPVIVSL 261 PR W +PSDHTPV+ L Sbjct: 240 VPRTWEQPSDHTPVVAQL 257 >gi|254389480|ref|ZP_05004707.1| exonuclease [Streptomyces clavuligerus ATCC 27064] gi|326444199|ref|ZP_08218933.1| exodeoxyribonuclease III [Streptomyces clavuligerus ATCC 27064] gi|197703194|gb|EDY49006.1| exonuclease [Streptomyces clavuligerus ATCC 27064] Length = 259 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 77/260 (29%), Positives = 128/260 (49%), Gaps = 1/260 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ AR+ L AW++ + D++C+QETK ++ FP E L+ + Y Sbjct: 1 MRIATWNVNSVTARLPRLLAWLESSGTDVLCIQETKCAEEQFPAEELREIGYESAIHADG 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVA++S+ E+V LPG A+ A +R+ ++Y+P+G +T Sbjct: 61 RWNGVALVSRVGLDEVVKGLPGGPAYDGAQEPRAISATCGP-VRLWSVYVPNGREVTHDH 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W+ + P GDYNI P D ++ +E T R + Sbjct: 120 YAYKLEWLAALKEAVAADAAGPRPFAVLGDYNIAPADEDVWDRAAFEGSTHVTEPERAAL 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 L+ G +D + H +++WDY + KN+G+RID + + + + +D Sbjct: 180 AALRETGLSDVVPRPLKYDHPFTYWDYRQLCFPKNRGMRIDLVYGNGPFAGAVKDSYVDR 239 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 + R SDH PV+V LD+ Sbjct: 240 EERKGKGASDHAPVVVDLDV 259 >gi|256784140|ref|ZP_05522571.1| exonuclease [Streptomyces lividans TK24] gi|289768021|ref|ZP_06527399.1| exodeoxyribonuclease III [Streptomyces lividans TK24] gi|289698220|gb|EFD65649.1| exodeoxyribonuclease III [Streptomyces lividans TK24] Length = 259 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 77/260 (29%), Positives = 124/260 (47%), Gaps = 1/260 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSI AR+ L AW++ + D++CLQE K + FPF+ L+ Y Sbjct: 1 MRIATWNVNSITARLPRLLAWLESSGTDVLCLQEAKVAEAQFPFDALREAGYEAAVHATG 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVA+LS+ ++V LPGD + A +R+ ++Y+P+G + Sbjct: 61 RWNGVAVLSRVGLEDVVKGLPGDPGYEGVQEPRAISATCGP-VRVWSVYVPNGREVDHPH 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W + P GDYN+ P D Y+ +E T R + Sbjct: 120 YAYKLQWFEVLRAAVEGDAAGGRPFAVLGDYNVAPTDDDVYDRAAFEGATHVTPAERAAL 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 L+ G +D + H +++WDY + KN+G+RID + + + + +D Sbjct: 180 ASLRGAGLSDVVPRPLKYDHPFTYWDYRQLCFPKNRGMRIDLVYGNEPFAKAVTDSYVDR 239 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 + R SDH PV+V LD+ Sbjct: 240 EERKGKGASDHAPVVVDLDL 259 >gi|27365439|ref|NP_760967.1| exonuclease III [Vibrio vulnificus CMCP6] gi|27361587|gb|AAO10494.1| exodeoxyribonuclease III [Vibrio vulnificus CMCP6] Length = 268 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 85/268 (31%), Positives = 138/268 (51%), Gaps = 9/268 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +RAR+H L A I ++ PD+I LQE K D+ FP E ++++ Y + GQK Sbjct: 1 MKIVSFNINGLRARLHQLQALIDKHQPDVIGLQEIKVHDEAFPVEDVEAMGYKVYFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITS- 121 ++ GVA+L K +PIEI P D+ + Q R I TF + + + N Y P G+ I Sbjct: 61 AHYGVALLCKQEPIEIQKGFPTDNDEHQKRMIIGTFLDEKGEKVTVLNGYFPQGDNIAHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175 TK+ K + K + + + + E ++ GD NI P D + F Sbjct: 121 TKFPYKRQFYKDLMGYLTTHRDNGEQVVVMGDINISPIDADIGIGEVNRKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R+ Q L + G D R H + +S++DY + + N+G+RID I+ +P + Sbjct: 181 QPEEREWLQTLLDWGLEDTFRKLHPSVDDKFSWFDYRSKGFDDNRGLRIDVILATPSLAA 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + ID + RG KPSDH P+ + + Sbjct: 241 QCRESDIDYELRGIEKPSDHAPIWATFE 268 >gi|296165787|ref|ZP_06848295.1| exodeoxyribonuclease III [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898860|gb|EFG78358.1| exodeoxyribonuclease III [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 322 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 76/267 (28%), Positives = 124/267 (46%), Gaps = 7/267 (2%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 S + +ATWNVNSIR+R+ + W+ + D++ +QETK D FP L Y + G Sbjct: 53 SPLRLATWNVNSIRSRLPRVVDWLARADVDVLAMQETKCSDGQFPTLPFFELGYEVAHVG 112 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-----TQTLRIGNLYLPHG 116 +NGVAI S+ ++ G + AT +RI +LY+P+G Sbjct: 113 FNQWNGVAIASRVGLDDVRVGFDGQPSWSSKPEVAATAEARALGATCDGVRIWSLYVPNG 172 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEE--PLIFAGDYNIIPQPHDCYNPIIWENDAC 174 + Y K+ W+ A+ L + + AGD+NI P D ++ + Sbjct: 173 RALGDPHYTYKLEWLAALRDTAAGWLRDDPAAQIALAGDWNIAPTDDDVWSTEFYAGATH 232 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 + R++F + + FTD +R +Y++WDY + K +G+RID I+ SP Sbjct: 233 VSEPERRAFAAIVDAQFTDVVRPFAPGPGVYTYWDYTQLRFPKRQGMRIDFILASPALAD 292 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261 + A+I + R SDH PV + + Sbjct: 293 RVTDAQIVREERKGKAASDHAPVQIDI 319 >gi|186682991|ref|YP_001866187.1| exodeoxyribonuclease III [Nostoc punctiforme PCC 73102] gi|186465443|gb|ACC81244.1| exodeoxyribonuclease III [Nostoc punctiforme PCC 73102] Length = 260 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 93/260 (35%), Positives = 137/260 (52%), Gaps = 2/260 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSIR R+ + W+ N D++CLQETK D FP + L Y++ GQK Sbjct: 1 MKIATWNVNSIRTRLEQVTDWLTNNPVDVLCLQETKVADAEFPRSPFEQLGYNLYISGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT--LRIGNLYLPHGNPITS 121 SYNGVA++S+ + + + D+ + E I +RI NLY+P+G + + Sbjct: 61 SYNGVALISRQPLLNVSSGFRAILPDLHHEWDEQKRVITGVIDGVRIVNLYVPNGAAVGT 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 KY+ K+ W+ + E + GD+NI + D + + EN T RQ Sbjct: 121 EKYEYKLRWLTALHEYLRVLALSEPAICVCGDFNIALEDKDIHEQVSTENHIMATETERQ 180 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 + +++ +GF DA R YS+WDY A ++ +N G RIDH L+P S I Sbjct: 181 ALREILQLGFADAFRKFTTEGGNYSWWDYRAAAFRRNLGWRIDHHYLTPVLYERATSCII 240 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 D +PR T+PSDHTPVIV Sbjct: 241 DAEPRKSTQPSDHTPVIVEF 260 >gi|257069696|ref|YP_003155951.1| Exodeoxyribonuclease III [Brachybacterium faecium DSM 4810] gi|256560514|gb|ACU86361.1| Exodeoxyribonuclease III [Brachybacterium faecium DSM 4810] Length = 266 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 75/266 (28%), Positives = 136/266 (51%), Gaps = 6/266 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+NS+RAR+ + A+++ ++ D++ LQETK + + LQ Y + G Sbjct: 1 MRIATWNINSLRARMDRVLAFLERHDVDVLALQETKAKPQQLDLTALQEAGYEVAAHGLN 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT----INTQTLRIGNLYLPHGNPI 119 +NGVA++S+ ++ T LP L + + LRI +LY+P+G + Sbjct: 61 QWNGVALISRVGLSDVRTELPALPLWPEDETGVVEARALGGLVGDGLRIWSLYIPNGREL 120 Query: 120 TSTKYDDKISWIKRFLRFASQRLELE--EPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 YD K+ W++ ++ L + + GD+N+ P D ++ ++ + Sbjct: 121 DHPHYDYKLRWLEALRAEGARELAEDLSAKVALVGDFNVAPLDEDVWDMEFFDGKTHVSE 180 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 R +F+ + + G+ D +R H +Y++WDY + K +G+RID ++ SP S + Sbjct: 181 PERAAFRAVVDAGYADVVRGDHPGPGVYTYWDYQQLRFPKRQGMRIDFVLGSPSVQSAVT 240 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263 + ID + R SDH PV+V LD+ Sbjct: 241 GSFIDREERKGKGASDHAPVVVDLDL 266 >gi|124022407|ref|YP_001016714.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9303] gi|123962693|gb|ABM77449.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9303] Length = 279 Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats. Identities = 90/272 (33%), Positives = 141/272 (51%), Gaps = 4/272 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSIR R+ + AW+++ PD++CLQETK +D FP E ++ Y + GQK Sbjct: 1 MQIATWNVNSIRTRLDQVQAWLQDAQPDLLCLQETKVDDPLFPHEVFEAQGYQVHFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN----TQTLRIGNLYLPHGNPI 119 +YNGVAI+S+ ++ G+ + +RI N+Y+P+G+ + Sbjct: 61 AYNGVAIVSRQPLEDVRRGFTGELPEDAEALQLGEQKRVISALVNNIRIVNVYVPNGSAL 120 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 S KY K+ W+ R+ S + + +EPL GD+NI + D ++P + Sbjct: 121 KSEKYPYKLEWLSCLNRYLSAQAKRDEPLCLVGDFNIALEARDIHHPERLTGGIMASELE 180 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R++ K+ D R + +S+WDY + +W +++G RIDHI L E S S Sbjct: 181 REALLKVLGDRLHDVFRVFEPDANHWSWWDYRSGAWDRDQGWRIDHIYLCDELLSQARSC 240 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271 I RG KPSDH PV V L+ P ++ Sbjct: 241 VIHKHLRGHEKPSDHAPVTVDLNWPPIDDDEE 272 >gi|30248054|ref|NP_840124.1| exodeoxyribonuclease III:exodeoxyribonuclease III xth [Nitrosomonas europaea ATCC 19718] gi|30179939|emb|CAD83934.1| Exodeoxyribonuclease III:Exodeoxyribonuclease III xth [Nitrosomonas europaea ATCC 19718] Length = 254 Score = 209 bits (532), Expect = 4e-52, Method: Composition-based stats. Identities = 94/258 (36%), Positives = 139/258 (53%), Gaps = 5/258 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS++ R+ + W+ N PDI+CLQETK +D+ FP + + Y GQK Sbjct: 1 MKIATWNVNSLKVRLQQVIDWLNLNQPDILCLQETKLQDEFFPMDAIAQAGYRSIYIGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVA+LSK +I T LPG D + LR+ Y+P+G + S K Sbjct: 61 TYNGVALLSKETGEDICTALPGFDDMQKRLIAATYGD-----LRVICAYVPNGEHVDSEK 115 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W+ + RF Q+ + GD+NI P+ D Y+P W + RQ+F Sbjct: 116 YIYKLEWLSQLNRFLQQQRACYGKVALLGDFNIAPEDRDVYDPEAWRGQVLCSEPERQAF 175 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + L + GF D+ Y++WDY ++ +N+G+RIDHI+LS E ++D Sbjct: 176 RGLLDTGFVDSFHLFEQPEKTYTWWDYRMMAFRRNRGLRIDHILLSHEMADRCTIWQVDK 235 Query: 244 KPRGWTKPSDHTPVIVSL 261 PR +PSDH PV+V L Sbjct: 236 LPRKLERPSDHAPVLVEL 253 >gi|239927938|ref|ZP_04684891.1| exonuclease [Streptomyces ghanaensis ATCC 14672] gi|291436275|ref|ZP_06575665.1| exonuclease [Streptomyces ghanaensis ATCC 14672] gi|291339170|gb|EFE66126.1| exonuclease [Streptomyces ghanaensis ATCC 14672] Length = 259 Score = 209 bits (532), Expect = 4e-52, Method: Composition-based stats. Identities = 80/260 (30%), Positives = 127/260 (48%), Gaps = 1/260 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSI AR+ L AW++ + D++CLQE K + FPFE L+ L Y Sbjct: 1 MRIATWNVNSITARLPRLLAWLESSGTDVLCLQEAKVAEDRFPFEELRELGYESAVNATG 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVA+LS+ ++V LPGD + A +R+ ++Y+P+G + Sbjct: 61 RWNGVALLSRVGLEDVVKGLPGDPGYEGSEEPRAVSATCGP-VRVWSVYVPNGREVDHPH 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W + + E P GDYN+ P D Y+ +E T R + Sbjct: 120 YAYKLQWFEALKAAVAGDAAGERPFAVLGDYNVAPTDDDVYDRAAFEGLTHVTPAERAAL 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 L+ G +D + H +++WDY + KN+G+RID + + + + +D Sbjct: 180 ASLRETGLSDIVPRPLKYEHPFTYWDYRQLCFPKNRGMRIDLVYGNAPFAKAVTDSYVDR 239 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 + R SDH PV+V LD+ Sbjct: 240 EERKGKGASDHAPVVVDLDL 259 >gi|238797343|ref|ZP_04640843.1| Exodeoxyribonuclease III [Yersinia mollaretii ATCC 43969] gi|238718774|gb|EEQ10590.1| Exodeoxyribonuclease III [Yersinia mollaretii ATCC 43969] Length = 271 Score = 209 bits (532), Expect = 4e-52, Method: Composition-based stats. Identities = 83/271 (30%), Positives = 131/271 (48%), Gaps = 8/271 (2%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 M + ++N+N +RAR H LAA I+++ PD+I LQETK D FP E + YH+ Sbjct: 1 MLTMKFVSFNINGLRARPHQLAAIIEQHQPDVIGLQETKVHDDMFPLEDVSQHGYHVFYH 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 GQK + GVA+L+K +P+ + P D+ D Q R I A L + N Y P G Sbjct: 61 GQKGHYGVALLTKEKPLAVRRGFPTDEEDAQRRIIMADIATPQGPLTVINGYFPQGESRD 120 Query: 121 STK-YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDA 173 + K + ++ Q+L + ++ GD NI P + + Sbjct: 121 HPIKFPAKERFYADLQQYLEQQLSADSQVLIMGDINISPTDLDIGIGEENRKRWLRTGKC 180 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 F E R ++LQ+ G D RA + + +S++DY + + +N+G+RID ++ S Sbjct: 181 SFLPEERAWLERLQSWGLVDTFRAANPDCNDQFSWFDYRSRGFDENRGLRIDLLLASQPL 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + + ID + RG KPSDH PV + Sbjct: 241 AARCIATGIDYEIRGMEKPSDHAPVWSEFAL 271 >gi|167837200|ref|ZP_02464083.1| exodeoxyribonuclease III [Burkholderia thailandensis MSMB43] Length = 258 Score = 209 bits (531), Expect = 4e-52, Method: Composition-based stats. Identities = 85/258 (32%), Positives = 135/258 (52%), Gaps = 1/258 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ R ++ W+ +++ D++CLQE K D+ FP E L++ Y GQK Sbjct: 1 MKIATWNVNSLNVRKQHVLDWLAQSDVDVLCLQELKIPDEKFPREALEAAGYRSWFAGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAIL++ + + + + +RI + Y P+G + S K Sbjct: 61 TYNGVAILARARLPFDEADVVRNIPGFEDSQQRLIAATIDG-VRIVSAYFPNGQALDSEK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W+ + + L+ L GDYNI P+ D ++P WE + + R F Sbjct: 120 FVYKMQWLDALQAWLKRELQRYPKLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +L +GF DA R +++WDY ++ +N G+RIDHI+LSP S +D Sbjct: 180 AQLVALGFVDAFRRFDQPEKTFTWWDYRMLAFRRNAGLRIDHILLSPALAETCTSCTVDR 239 Query: 244 KPRGWTKPSDHTPVIVSL 261 PR W +PSDHTPV+ + Sbjct: 240 VPRTWEQPSDHTPVVAQI 257 >gi|197285354|ref|YP_002151226.1| exodeoxyribonuclease III [Proteus mirabilis HI4320] gi|194682841|emb|CAR43141.1| exodeoxyribonuclease III [Proteus mirabilis HI4320] Length = 268 Score = 209 bits (531), Expect = 4e-52, Method: Composition-based stats. Identities = 85/268 (31%), Positives = 126/268 (47%), Gaps = 8/268 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A ++++ PD+I LQETK D FP ET+ +L YH+ GQK Sbjct: 1 MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLETVSALGYHVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122 + GVA+L+K +P+ + PGD + Q R I A L + N Y P G T Sbjct: 61 GHYGVALLTKAKPVAVRKGFPGDGEEAQRRMIMADIETPAGLLTVMNGYFPQGESRDHET 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACFT 176 K+ K + ++ + L P++ GD NI P + + F Sbjct: 121 KFPAKAKFYADLQQYLTTSLTPSSPVLIMGDLNISPTDKDIGIGENNMKRWLKMGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ L G TD RA H +S++DY + + N+G+RID ++ S Sbjct: 181 PEEREWLATLMGWGLTDTYRAQHPEVEDQFSWFDYRSKGFDDNRGLRIDLLLASRCLADN 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 S ID R KPSDH PV + Sbjct: 241 CISTGIDYDIRAMEKPSDHAPVWAEFKL 268 >gi|323135771|ref|ZP_08070854.1| exodeoxyribonuclease III [Methylocystis sp. ATCC 49242] gi|322398862|gb|EFY01381.1| exodeoxyribonuclease III [Methylocystis sp. ATCC 49242] Length = 269 Score = 209 bits (531), Expect = 4e-52, Method: Composition-based stats. Identities = 114/259 (44%), Positives = 159/259 (61%), Gaps = 1/259 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + VATWNVNS+R R+ L A++KE PDI+CLQE K ED FP ++ Y++ GQK Sbjct: 9 LRVATWNVNSVRQRLSPLLAFLKETAPDILCLQELKCEDHAFPRSEIEDAGYNVVVHGQK 68 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122 ++NGVAILS E LPG D + Q+R++EA LR+ ++Y P+GNP + Sbjct: 69 TFNGVAILSNRPIEETTIGLPGFDGEAQSRYVEAVISDGAGGVLRVASIYAPNGNPPDTP 128 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 KY K+++++ R A+ L LEE I AGDYN+IP+ D ++P W DA F + R + Sbjct: 129 KYTYKLAFMEALTRHAADLLRLEEVTILAGDYNVIPEARDVHDPAAWIGDALFMPQSRAA 188 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 Q++ N+G+TDA+RA D LY+FWDY A +W KN+G+RIDH++LSP A L I Sbjct: 189 LQRVINLGYTDALRAVTDEPGLYTFWDYQAGAWQKNRGLRIDHLLLSPRAADRLAGVEIH 248 Query: 243 TKPRGWTKPSDHTPVIVSL 261 R KPSDH + L Sbjct: 249 KSMRAGEKPSDHVAISAEL 267 >gi|320155825|ref|YP_004188204.1| exodeoxyribonuclease III [Vibrio vulnificus MO6-24/O] gi|319931137|gb|ADV86001.1| exodeoxyribonuclease III [Vibrio vulnificus MO6-24/O] Length = 268 Score = 209 bits (531), Expect = 4e-52, Method: Composition-based stats. Identities = 85/268 (31%), Positives = 138/268 (51%), Gaps = 9/268 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +RAR+H L A I ++ PD+I LQE K D+ FP E ++++ Y + GQK Sbjct: 1 MKIVSFNINGLRARLHQLQALIDKHQPDVIGLQEIKVHDEAFPVEDVEAMGYKVYLHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITS- 121 ++ GVA+L K +PIEI P D+ + Q R I TF + + + N Y P G+ I Sbjct: 61 AHYGVALLCKQEPIEIQKGFPTDNDEHQKRMIIGTFLDEKGEKVTVLNGYFPQGDNIAHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175 TK+ K + K + + + + E ++ GD NI P D + F Sbjct: 121 TKFPYKRQFYKDLMGYLTTHRDNGEQVVVMGDINISPIDADIGIGEVNRKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R+ Q L + G D R H + +S++DY + + N+G+RID I+ +P + Sbjct: 181 QPEEREWLQTLLDWGLEDTFRKLHPSVDDKFSWFDYRSKGFDDNRGLRIDVILATPSLAA 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + ID + RG KPSDH P+ + + Sbjct: 241 KCRESDIDYELRGIEKPSDHAPIWATFE 268 >gi|326317822|ref|YP_004235494.1| exodeoxyribonuclease III Xth [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374658|gb|ADX46927.1| exodeoxyribonuclease III Xth [Acidovorax avenae subsp. avenae ATCC 19860] Length = 302 Score = 209 bits (531), Expect = 4e-52, Method: Composition-based stats. Identities = 116/269 (43%), Positives = 163/269 (60%), Gaps = 6/269 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+NVNSIRAR+ L W++E P + CLQE K D FP E +++ Y GQK Sbjct: 1 MKIATFNVNSIRARLPALLQWLQETRPGVACLQELKCTDDAFPAEEIRAAGYGALWHGQK 60 Query: 64 SYNGVAILSKY-QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 ++NGVAIL++ +PIE+ LPGD D Q+R++EA + + LYLP+GNP Sbjct: 61 AWNGVAILARGAEPIEVQRGLPGDAADTQSRYLEAAVDG----VLVACLYLPNGNPAPGP 116 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K+D K++W+ R R A EP++ AGD+NIIP D Y P W DA F EVR + Sbjct: 117 KFDYKLAWLGRLARRADVLRSRPEPVVLAGDFNIIPTERDVYKPDAWVEDALFRTEVRDA 176 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F+ L + G+TDA+RA H +Y+FWDY + +N G+RIDH++L+P A L A +D Sbjct: 177 FRALVDSGWTDALRAVHPGETVYTFWDYLRQRFQRNAGLRIDHLLLNPAAARRLQDAGVD 236 Query: 243 TKPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271 RG +PSDH P L PEP+K++ Sbjct: 237 RDVRGRARPSDHAPAWAVLA-PEPQKRRP 264 >gi|160900429|ref|YP_001566011.1| exodeoxyribonuclease III [Delftia acidovorans SPH-1] gi|160366013|gb|ABX37626.1| exodeoxyribonuclease III [Delftia acidovorans SPH-1] Length = 258 Score = 209 bits (531), Expect = 4e-52, Method: Composition-based stats. Identities = 95/258 (36%), Positives = 144/258 (55%), Gaps = 1/258 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ R+ + AW++ N D + LQE K D FP + LQ YH + GQK Sbjct: 1 MQIATWNVNSLSVRLPQVLAWLQANPVDALALQELKLTDDKFPLQALQEAGYHAVSHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVA L++ ++V ++PG D D QAR I AT +R+ N Y +G + K Sbjct: 61 TYNGVAWLTRTPVRDVVRNIPGLD-DEQARIIAATLDAEGGPVRLINGYFVNGQAPGTDK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W++ + + + L+ GD+N+ P+ D Y+PI ++ T+E R F Sbjct: 120 FAYKMRWLQALQDWVKSEMAIHPRLVLVGDFNVAPEDRDSYDPIGLKDTIHHTVEERTHF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q L +G TDA R YS+WDY + KN+G+RIDHI++S + + +D Sbjct: 180 QALLQLGLTDAFRMFDQPEKSYSWWDYRMLGFQKNRGLRIDHILVSEALRPSVSACSVDR 239 Query: 244 KPRGWTKPSDHTPVIVSL 261 PR +PSDH PV+V+L Sbjct: 240 APRKNPQPSDHAPVVVTL 257 >gi|120610134|ref|YP_969812.1| exodeoxyribonuclease III [Acidovorax citrulli AAC00-1] gi|120588598|gb|ABM32038.1| exodeoxyribonuclease III [Acidovorax citrulli AAC00-1] Length = 258 Score = 209 bits (531), Expect = 4e-52, Method: Composition-based stats. Identities = 90/258 (34%), Positives = 139/258 (53%), Gaps = 1/258 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ R+ + AW+ +N D I LQE K D+ FP + +S YH + GQK Sbjct: 1 MKLATWNVNSLSIRLPQVLAWLADNPVDAIGLQELKLVDEKFPHDAFESAGYHAVSFGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAILS+ ++V ++PG + T LR N Y +G + K Sbjct: 61 TYNGVAILSRTPVRDVVRNIPGHEDTQARVIAATLDTPQGP-LRFINCYFVNGQAPGTEK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W+ R+ + L L+ GD+N+ P+ D ++P+ ++ T+E R F Sbjct: 120 FAYKMLWLAALHRWVREELLAHPRLVLVGDFNVAPEDRDSFDPVGLKDTIHHTVEERTHF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q L +G TDA R +S+WDY + KN+G+RIDHI++S + + ID Sbjct: 180 QSLLQLGLTDAYRMFEQPEKSFSWWDYRMLGFQKNRGLRIDHILVSEALRGQVTACTIDR 239 Query: 244 KPRGWTKPSDHTPVIVSL 261 +PR +PSDH PV+ +L Sbjct: 240 QPRKNPQPSDHAPVVATL 257 >gi|253989463|ref|YP_003040819.1| exonuclease III [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253780913|emb|CAQ84075.1| exodeoxyribonuclease iii (exonuclease iii) (exo iii) (ap endonucleas vi) [Photorhabdus asymbiotica] Length = 268 Score = 209 bits (531), Expect = 4e-52, Method: Composition-based stats. Identities = 85/268 (31%), Positives = 127/268 (47%), Gaps = 8/268 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H LAA ++ + PD+I LQETK D+ FP E + L YH+ GQK Sbjct: 1 MKFISFNINGLRARPHQLAAIVELHQPDVIGLQETKVHDELFPLEEVNKLGYHVFYYGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122 ++ GVA+L++ PI + PGDD D Q R I A L + N Y P G Sbjct: 61 AHYGVALLTRQAPIAVHRGFPGDDEDSQRRIIMADLETPHGLLTVINGYFPQGESRDHPV 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE------NDACFT 176 K+ K + + + Q L + ++ GD NI P D + F Sbjct: 121 KFPAKEKFYQDLQSYLEQNLSPQSQVLIMGDMNISPTDLDIGIGDNNQKRWLKTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R +L++ G D R + + +S++DY + + N+G+RID + S Sbjct: 181 PEERDWMDRLKDWGLVDTFRHLNPECNDQFSWFDYRSKGFDDNRGLRIDLLFASKPLAER 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + ID K R KPSDH PV +I Sbjct: 241 CIATGIDYKIREMEKPSDHAPVWAEFEI 268 >gi|291615383|ref|YP_003525540.1| exodeoxyribonuclease III Xth [Sideroxydans lithotrophicus ES-1] gi|291585495|gb|ADE13153.1| exodeoxyribonuclease III Xth [Sideroxydans lithotrophicus ES-1] Length = 252 Score = 209 bits (531), Expect = 4e-52, Method: Composition-based stats. Identities = 92/257 (35%), Positives = 141/257 (54%), Gaps = 7/257 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS++ R+ +L W+ N D++CLQETK+EDKNFP LQ Y + GQK Sbjct: 1 MKLATWNVNSLKVRLPHLLEWLAANPVDVVCLQETKSEDKNFPLAELQQAGYQVAFSGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAILS+ ++ +PG + + + +R+ +Y+P+G + S K Sbjct: 61 TYNGVAILSRQPIGDVQCGIPGFEDEQKRVIAATIDG-----VRVVCVYVPNGQEVGSDK 115 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W+ + + L L GDYNI P+ D ++P+ W+ + + R +F Sbjct: 116 YQYKLKWLAAITAWLKEELAKHPRLALLGDYNIAPEDRDVHDPVAWQGNVLVSAPERDAF 175 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + L +G DA R YS+WDY ++ +N G+RIDHI++SP + ID Sbjct: 176 KALLQLGLRDAFRLFEQAEKSYSWWDYRMMAFRRNMGLRIDHILISPAL--QCSACHIDK 233 Query: 244 KPRGWTKPSDHTPVIVS 260 PR +PSDHTPV+ Sbjct: 234 APRKLERPSDHTPVVAE 250 >gi|110638457|ref|YP_678666.1| exodeoxyribonuclease III (exonuclease III) [Cytophaga hutchinsonii ATCC 33406] gi|110281138|gb|ABG59324.1| exodeoxyribonuclease III (exonuclease III) [Cytophaga hutchinsonii ATCC 33406] Length = 255 Score = 209 bits (531), Expect = 4e-52, Method: Composition-based stats. Identities = 102/258 (39%), Positives = 144/258 (55%), Gaps = 3/258 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+NVN + R+ L W++E PD++CLQE K + FP E YH GQK Sbjct: 1 MKIATYNVNGVNGRLPVLLRWLQEARPDVVCLQELKAPQEKFPEEAFLQAGYHAIWHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 S+NGVAILS+ I + + D + + IG LYLP+GNP K Sbjct: 61 SWNGVAILSRSSDIRELRRVLPGDPEDNHS---RYIEAFVNGIVIGCLYLPNGNPAPGPK 117 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 +D K+ W KR A+ +E + P+ GD+N++P D Y P W +DA F EVR +F Sbjct: 118 FDYKLKWFKRLTAHAADLIEADMPIALIGDFNVMPTDLDVYKPESWIDDALFRPEVRAAF 177 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +KL G+TDAIR H +Y+FWDY+ +++ +N G+RIDH +LSP + L A +D Sbjct: 178 KKLMKQGWTDAIRKLHPDEKIYTFWDYFRNAYGRNAGLRIDHFLLSPPLAAKLKKAGVDK 237 Query: 244 KPRGWTKPSDHTPVIVSL 261 RGW K SDH P + L Sbjct: 238 HVRGWEKSSDHAPTWIIL 255 >gi|302522772|ref|ZP_07275114.1| exodeoxyribonuclease III [Streptomyces sp. SPB78] gi|318058357|ref|ZP_07977080.1| exodeoxyribonuclease III [Streptomyces sp. SA3_actG] gi|302431667|gb|EFL03483.1| exodeoxyribonuclease III [Streptomyces sp. SPB78] Length = 262 Score = 209 bits (531), Expect = 4e-52, Method: Composition-based stats. Identities = 79/263 (30%), Positives = 128/263 (48%), Gaps = 1/263 (0%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 M + +ATWNVNSI AR+ L AW++ + D++C+QETKT + FP E L+ Y Sbjct: 1 MVGMRIATWNVNSITARLPRLLAWLESSGTDVLCVQETKTTAEGFPTEALREAGYESAVN 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +NGVA++S+ ++V+ LP A +R+ ++Y+P+G + Sbjct: 61 ATGRWNGVAVISRAGLDDVVSGLPDQPAYDGVMEPRALGATCGP-VRVWSVYVPNGREVG 119 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 Y K+ W++ + P GDYN+ P D Y+P ++E T R Sbjct: 120 HPHYAYKLEWLEALRAAVAGDAAGTRPFAVMGDYNVAPGDEDVYDPAVFEGLTHVTPPER 179 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + +L+ G D + Y++WDY ++ KN+G+RID + + S A Sbjct: 180 AALAELRATGLGDLVPRPLKYDRPYTYWDYRQLAFPKNRGMRIDLVYANAAFRSAAKDAY 239 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263 +D + R SDH PV+V LD+ Sbjct: 240 VDREERKGKGASDHAPVVVDLDV 262 >gi|13471939|ref|NP_103506.1| exonuclease [Mesorhizobium loti MAFF303099] gi|14022683|dbj|BAB49292.1| probable exonuclease [Mesorhizobium loti MAFF303099] Length = 256 Score = 209 bits (531), Expect = 4e-52, Method: Composition-based stats. Identities = 91/259 (35%), Positives = 133/259 (51%), Gaps = 3/259 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+N+N+I +R+ NL AW+ PD++CLQE K D FP L Y G+ Sbjct: 1 MKLATFNINNINSRLENLLAWLAAAKPDVVCLQELKARDMQFPRTALADAGYGAVWKGEP 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 ++NGVAIL++ + A + I LY P+GNP K Sbjct: 61 TWNGVAILARGAEPVLTRDAL---PGDDADRQSRYIEAAVDGIVIACLYAPNGNPQPGPK 117 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K++W R A+Q L+ P++ AGDYNI+P+P D Y ++++A E R +F Sbjct: 118 FQYKLAWHARLEAHAAQLLDTGLPVVLAGDYNIVPEPRDIYATRSYDDNALVQPESRAAF 177 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 L G+ DA+R + LY+FWDY + W ++ G+R+DHI+LS L A ID Sbjct: 178 AALIEQGWVDALRKIYPKETLYTFWDYRRNRWPRDAGLRLDHILLSKTLARRLKGAGIDR 237 Query: 244 KPRGWTKPSDHTPVIVSLD 262 RG SDH PV V L Sbjct: 238 DVRGEDGASDHAPVWVELK 256 >gi|261381264|ref|ZP_05985837.1| exodeoxyribonuclease III [Neisseria subflava NJ9703] gi|284795738|gb|EFC51085.1| exodeoxyribonuclease III [Neisseria subflava NJ9703] Length = 256 Score = 209 bits (531), Expect = 4e-52, Method: Composition-based stats. Identities = 92/259 (35%), Positives = 137/259 (52%), Gaps = 4/259 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ R+ + W+ ++ DI+ LQE K + FP LQ + +H GQK Sbjct: 1 MKIATWNVNSLNVRLPQVQNWLADHQADILALQELKLDQDKFPAAALQMMGWHCVWSGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAI+S+Y+P ++ LP D Q R I AT +R+ N+Y +G + S K Sbjct: 61 TYNGVAIISRYEPQDVHCGLPALPDDPQRRVIAATING----VRVINVYCVNGEALDSPK 116 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K W F + L+ GD+NI P DCY+P W + RQ F Sbjct: 117 FQYKEQWFAALTEFVRTEMAAHPKLVLLGDFNIAPADADCYDPEKWHEKIHCSSIERQWF 176 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + L ++G TD++R H Y+++DY + + G+RIDHI+ SPE + L +D Sbjct: 177 KNLLDLGLTDSLRKIHPEDAFYTWFDYRGGMFQRKLGLRIDHILTSPELAATLTDVTVDL 236 Query: 244 KPRGWTKPSDHTPVIVSLD 262 + R +PSDH PVI D Sbjct: 237 ETRAQERPSDHAPVIAEFD 255 >gi|156934327|ref|YP_001438243.1| exonuclease III [Cronobacter sakazakii ATCC BAA-894] gi|156532581|gb|ABU77407.1| hypothetical protein ESA_02158 [Cronobacter sakazakii ATCC BAA-894] Length = 268 Score = 209 bits (531), Expect = 4e-52, Method: Composition-based stats. Identities = 81/268 (30%), Positives = 127/268 (47%), Gaps = 8/268 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H LAA ++++ PD+I LQETK D FP E + L Y++ GQK Sbjct: 1 MKFISFNINGLRARPHQLAALVEQHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122 + GVA+L+K P+ + PGD + Q R I A + + + N Y P G Sbjct: 61 GHYGVALLTKATPVSVRRGFPGDGEEAQRRIIMAEIPSSIGDITVINGYFPQGESRDHEV 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + + + L ++P++ GD NI P + + F Sbjct: 121 KFPAKAKFYQDLQDYLETALSNDKPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +L N G D R + YS++DY + + N+G+RID ++ S + Sbjct: 181 PEEREWMGRLLNWGLKDTFRHANPETSDRYSWFDYRSKGFDDNRGLRIDLLLASDPLMAR 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 L ID R KPSDH PV + + Sbjct: 241 LAETGIDYDIRAMEKPSDHAPVWATFSL 268 >gi|238020687|ref|ZP_04601113.1| hypothetical protein GCWU000324_00577 [Kingella oralis ATCC 51147] gi|237867667|gb|EEP68673.1| hypothetical protein GCWU000324_00577 [Kingella oralis ATCC 51147] Length = 255 Score = 209 bits (531), Expect = 4e-52, Method: Composition-based stats. Identities = 92/259 (35%), Positives = 138/259 (53%), Gaps = 4/259 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ R+ ++ W+ + PDI+ LQE K E +P + + +H GQK Sbjct: 1 MKIATWNVNSLNVRLPQVSDWLAAHQPDILVLQELKLEQDKYPAAAFRMMGWHTAWAGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAI+S++ ++ T LP D Q R I AT +R+ N+Y +G + S K Sbjct: 61 TYNGVAIISRHPLQDVQTGLPALPDDPQQRVIAATI----NDIRVINVYCVNGEALDSPK 116 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K W + +L L+ GD+NI P D Y+P W + E RQ F Sbjct: 117 FAYKRQWFAALTEYVRDQLAQHPKLVLLGDFNIAPADDDVYDPQRWHEKILCSGEERQWF 176 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 L N+G DA+R + T Y++WDY ++K G+RIDH+++SP L S ID+ Sbjct: 177 ANLLNLGLHDALRHIYPTGAHYTWWDYRGAMFAKGLGLRIDHLLISPALRDSLRSVNIDS 236 Query: 244 KPRGWTKPSDHTPVIVSLD 262 + R +PSDH PV+ D Sbjct: 237 EARAQERPSDHAPVVAEWD 255 >gi|218245849|ref|YP_002371220.1| exodeoxyribonuclease III [Cyanothece sp. PCC 8801] gi|257058897|ref|YP_003136785.1| exodeoxyribonuclease III [Cyanothece sp. PCC 8802] gi|218166327|gb|ACK65064.1| exodeoxyribonuclease III [Cyanothece sp. PCC 8801] gi|256589063|gb|ACU99949.1| exodeoxyribonuclease III [Cyanothece sp. PCC 8802] Length = 262 Score = 209 bits (531), Expect = 5e-52, Method: Composition-based stats. Identities = 96/262 (36%), Positives = 145/262 (55%), Gaps = 4/262 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + VATWNVNSIR R ++ W+K NN D++C+QETK D++FP + L YH+ GQK Sbjct: 1 MKVATWNVNSIRTRQPHVIDWLKTNNIDVLCVQETKVIDQDFPKTPFEELGYHLYIYGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL---RIGNLYLPHGNPIT 120 +YNGVAI S+ ++ + A + + T RI NLY+P+G+ + Sbjct: 61 AYNGVAIFSRQPLEDVTMGFTPIVGESLAEDFDEQKRVITGIFQGVRIVNLYVPNGSAVG 120 Query: 121 STKYDDKISWIKRFLRFASQRLEL-EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + KYD K+ W+K ++ +Q LE ++ L GD+NI + D YN E+ + Sbjct: 121 TEKYDYKLRWLKVLKQYLTQFLEKSKQELCICGDFNIALEDKDIYNSKSKEDHIMSSPLE 180 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R+S + + ++G DA R +S+WDY + + +N+G RIDH L+P+ S Sbjct: 181 RESLKDILDLGLKDAFRKFTSEGGQFSWWDYRSGGFQRNRGWRIDHHYLTPKLYEKAISC 240 Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261 ID +PR T+PSDH PVIV Sbjct: 241 TIDIEPRKLTQPSDHAPVIVEF 262 >gi|74318453|ref|YP_316193.1| exodeoxyribonuclease III [Thiobacillus denitrificans ATCC 25259] gi|74057948|gb|AAZ98388.1| exodeoxyribonuclease III xth [Thiobacillus denitrificans ATCC 25259] Length = 255 Score = 209 bits (531), Expect = 5e-52, Method: Composition-based stats. Identities = 84/258 (32%), Positives = 128/258 (49%), Gaps = 5/258 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A WNVNS++ R+ L ++ PD++CLQETK D FP L + Y GQK Sbjct: 1 MKIAAWNVNSLKVRLPQLLDFLATRRPDVVCLQETKVPDDAFPSVELSAAGYRAVFSGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAILS+ Q ++ +PG + + R+ +Y P+G S K Sbjct: 61 TYNGVAILSRSQATDVSVGIPGFGDEQKRVIAATVEGT-----RVVCVYCPNGQSPDSDK 115 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K++W + + L L GD+NI P+ D ++P WE + R+ F Sbjct: 116 YFYKLAWFDALSLWLMEELARHPRLAVLGDFNIAPEDRDVHDPKAWEGSVHVSPRERERF 175 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q L +G D+ R +S+WDY + +N G+RIDHI+L+ + S+ ID Sbjct: 176 QALLQLGLKDSFRLFEQPEKSFSWWDYRMMGFRRNHGLRIDHILLTDALAASCTSSTIDR 235 Query: 244 KPRGWTKPSDHTPVIVSL 261 R +PSDH PV+ + Sbjct: 236 DMRKLERPSDHAPVLAEI 253 >gi|21958993|gb|AAM85715.1|AE013819_1 exonuclease III [Yersinia pestis KIM 10] gi|45436631|gb|AAS62185.1| exodeoxyribonuclease III [Yersinia pestis biovar Microtus str. 91001] Length = 271 Score = 209 bits (531), Expect = 5e-52, Method: Composition-based stats. Identities = 88/271 (32%), Positives = 132/271 (48%), Gaps = 8/271 (2%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 M + ++N+N +RAR H LAA I+++ PD+I LQETK D FP E + YH+ Sbjct: 1 MLTMKFVSFNINGLRARPHQLAAIIEQHQPDVIGLQETKVHDDMFPLEDVSQHGYHVFYH 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 GQK + GVA+L+K QP+ + P D+ D Q R I A TL + N Y P G Sbjct: 61 GQKGHYGVALLTKEQPLAVRRGFPSDEEDAQRRIIMADLATPQGTLTVINGYFPQGESRD 120 Query: 121 STK-YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDA 173 + K + R+ ++L E ++ GD NI P D + Sbjct: 121 HPIKFPAKARFYADLQRYLEEQLSPEAQVLIMGDLNISPTDLDIGIGEDNRKRWLRTGKC 180 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 F E R+ ++LQN G D RA + + +S++DY + + +N+G+RID ++ S Sbjct: 181 SFLPEEREWLERLQNWGLVDTFRAANPDCNDHFSWFDYRSRGFDENRGLRIDLLLASQPL 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + + ID RG KPSDH PV + Sbjct: 241 AARCIATGIDYAIRGMEKPSDHAPVWSEFSL 271 >gi|227355788|ref|ZP_03840181.1| exodeoxyribonuclease III [Proteus mirabilis ATCC 29906] gi|227164107|gb|EEI49004.1| exodeoxyribonuclease III [Proteus mirabilis ATCC 29906] Length = 268 Score = 208 bits (530), Expect = 5e-52, Method: Composition-based stats. Identities = 85/268 (31%), Positives = 127/268 (47%), Gaps = 8/268 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A ++++ PD+I LQETK D FP ET+ +L YH+ GQK Sbjct: 1 MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLETVSALGYHVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122 + GVA+L+K +P+ + PGD + Q R I A L + N Y P G T Sbjct: 61 GHYGVALLTKAKPVAVRKGFPGDGEEAQRRMIMADIETPAGLLTVMNGYFPQGESRDHET 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACFT 176 K+ K + ++ + L P++ GD NI P + + F Sbjct: 121 KFPAKAKFYADLQQYLTTSLTPSSPVLIMGDLNISPTDKDIGIGENNMKRWLKMGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ L G TD RA H + +S++DY + + N+G+RID ++ S Sbjct: 181 PEEREWLATLMGWGLTDTYRAQHPEVENQFSWFDYRSKGFDDNRGLRIDLLLASRCLADN 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 S ID R KPSDH PV + Sbjct: 241 CISTGIDYDIRAMEKPSDHAPVWAEFKL 268 >gi|260597606|ref|YP_003210177.1| exonuclease III [Cronobacter turicensis z3032] gi|260216783|emb|CBA30234.1| Exodeoxyribonuclease III [Cronobacter turicensis z3032] Length = 268 Score = 208 bits (530), Expect = 5e-52, Method: Composition-based stats. Identities = 82/268 (30%), Positives = 127/268 (47%), Gaps = 8/268 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H LAA ++++ PD+I LQETK D FP E + L Y++ GQK Sbjct: 1 MKFISFNINGLRARPHQLAALVEQHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122 + GVA+L+K P+ + PGDD + Q R I A + + N Y P G Sbjct: 61 GHYGVALLTKATPVSVRRGFPGDDEEAQRRIIMAEIPSAIGDITVINGYFPQGESRDHAV 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + + + L ++P++ GD NI P + + F Sbjct: 121 KFPAKAKFYQDLQDYLETALSNDKPVLIMGDMNISPGDLDIGIGEESRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +L N G D R + YS++DY + + N+G+RID ++ S + Sbjct: 181 PEEREWMGRLLNWGLKDTFRHANPDITDRYSWFDYRSKGFDDNRGLRIDLLLASDPLMAR 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 L ID R KPSDH PV + + Sbjct: 241 LVETGIDYDIRAMEKPSDHAPVWATFSL 268 >gi|221066056|ref|ZP_03542161.1| exodeoxyribonuclease III Xth [Comamonas testosteroni KF-1] gi|220711079|gb|EED66447.1| exodeoxyribonuclease III Xth [Comamonas testosteroni KF-1] Length = 258 Score = 208 bits (530), Expect = 5e-52, Method: Composition-based stats. Identities = 92/259 (35%), Positives = 143/259 (55%), Gaps = 1/259 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ R+ + W+ N D + LQE K D FP Q Y + GQK Sbjct: 1 MKIATWNVNSLSVRLPQVLEWLAANPVDALGLQELKLTDDKFPHMAFQEAGYTAVSHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVA +++ ++V ++PG D D QAR I T +R+ N Y +G S K Sbjct: 61 TYNGVAWITRETGRDVVRNIPGLD-DEQARIIATTIDSPAGEVRLINGYFVNGQEPGSEK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W++ + +++ L L+ GD+N+ P+ D Y+P+ ++ T++ R F Sbjct: 120 FAYKMRWLQALQDWVKEQMALHPRLVLVGDFNVAPEDRDSYDPVGLKDTIHHTVQERDHF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q+L +G +DA R YS+WDY + KN+G+RIDHI++S S + + +D Sbjct: 180 QRLLQLGLSDAFRMFEQPEKSYSWWDYRMLGFQKNRGLRIDHILVSEALRSKVSACSVDR 239 Query: 244 KPRGWTKPSDHTPVIVSLD 262 PR +PSDH PVIV+LD Sbjct: 240 APRKNKQPSDHAPVIVTLD 258 >gi|26989426|ref|NP_744851.1| exodeoxyribonuclease III, putative [Pseudomonas putida KT2440] gi|24984291|gb|AAN68315.1|AE016465_8 exodeoxyribonuclease III, putative [Pseudomonas putida KT2440] Length = 265 Score = 208 bits (530), Expect = 5e-52, Method: Composition-based stats. Identities = 103/262 (39%), Positives = 152/262 (58%), Gaps = 5/262 (1%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 M + +AT+N+N IR+R+ L AW++ PDI CLQE K D+ FP L++ Y Sbjct: 1 MKALKIATFNINGIRSRLPALLAWLEREQPDIACLQELKAADQQFPRAELEAAGYGSLHH 60 Query: 61 GQKSYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 GQ S+NGVAIL + P+E+ LPG + D Q+R++EA + + LYLP+GNP+ Sbjct: 61 GQPSWNGVAILVRGSDPLEVRRGLPGLEEDSQSRYLEAA----AHGVLVACLYLPNGNPL 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K+D K+ W + ++ A E P + AGD+N++P D YNP W DA E Sbjct: 117 PGPKFDYKLHWFECLIQHARSLQESGHPTLLAGDFNVVPTDMDIYNPRSWLKDALLQPES 176 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R +Q+L + G+ DAIR + +Y+FWDY+ + W++N G+RIDH++L+ E L A Sbjct: 177 RACYQRLLDQGWLDAIRHLYPDERVYTFWDYFRNHWARNAGLRIDHLLLNRELAPYLKRA 236 Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261 +D R K SDH PV + L Sbjct: 237 GVDAWVRNQAKASDHAPVWIEL 258 >gi|253688361|ref|YP_003017551.1| exodeoxyribonuclease III [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251754939|gb|ACT13015.1| exodeoxyribonuclease III [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 272 Score = 208 bits (530), Expect = 5e-52, Method: Composition-based stats. Identities = 90/268 (33%), Positives = 127/268 (47%), Gaps = 8/268 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V ++N+N +RAR H LAA I+++ PD+I LQETK D FP E + YH+ GQK Sbjct: 5 MKVVSFNINGLRARPHQLAAIIEQHQPDVIGLQETKVHDDMFPLEDVSQYGYHVYYHGQK 64 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122 + GVA+L K QPI + P D+ D Q R I A F T I N Y P G Sbjct: 65 GHYGVALLCKAQPIAVRRGFPTDEDDAQRRIIMADFATEHGTFTIVNGYFPQGESRDHPV 124 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + + + Q +PLI GD NI P + + F Sbjct: 125 KFPAKTRFYQDLQTYLEQHHSATQPLIVMGDVNISPTDLDIGIGEENRKRWLRTGKCSFL 184 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +LQ G D RA + + +S++DY + + N+G+RID I+ S Sbjct: 185 PEEREWMARLQGWGLIDTFRAANPESNDRFSWFDYRSAGFDDNRGLRIDLILASNFLADR 244 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + ID RG KPSDH P+ + Sbjct: 245 CVATGIDYDIRGMEKPSDHAPIWAQFAL 272 >gi|298493134|ref|YP_003723311.1| exodeoxyribonuclease III ['Nostoc azollae' 0708] gi|298235052|gb|ADI66188.1| exodeoxyribonuclease III ['Nostoc azollae' 0708] Length = 260 Score = 208 bits (530), Expect = 5e-52, Method: Composition-based stats. Identities = 86/260 (33%), Positives = 144/260 (55%), Gaps = 2/260 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSIR R+ + W+ E+ D++CLQETK DK+FP + +++ YH GQK Sbjct: 1 MKIATWNVNSIRTRLEQVINWLSESPVDVLCLQETKVVDKDFPLISFENVGYHPYIYGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT--LRIGNLYLPHGNPITS 121 +YNGVA++S+ + +++ ++ E I +RI N Y+P+G+ + S Sbjct: 61 AYNGVALISRQPLENVSMGFCAILPELEPQWDEQKRVITGVIDGVRIVNTYVPNGSAVGS 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 KY+ K+ W+ ++ L + + GD+NI + D ++ + E+ + RQ Sbjct: 121 EKYEYKLGWLTVLRKYLQVLLLSDPAISMCGDFNIALEDIDIHDKVKIEDHIMASERERQ 180 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 + + + ++GF DA R ++ YS+WDY ++ +N G RIDH ++P + S I Sbjct: 181 ALRDILSLGFADAFRKFNNEGGNYSWWDYRTAAFRRNLGWRIDHHYVTPVLCARAQSCII 240 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 D PR +PSDHTPV+V Sbjct: 241 DVAPRKLEQPSDHTPVVVEF 260 >gi|318081282|ref|ZP_07988614.1| exodeoxyribonuclease III [Streptomyces sp. SA3_actF] Length = 259 Score = 208 bits (530), Expect = 5e-52, Method: Composition-based stats. Identities = 78/260 (30%), Positives = 127/260 (48%), Gaps = 1/260 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSI AR+ L AW++ + D++C+QETKT + FP E L+ Y Sbjct: 1 MRIATWNVNSITARLPRLLAWLESSGTDVLCVQETKTTAEGFPTEALREAGYESAVNATG 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVA++S+ ++V+ LP A +R+ ++Y+P+G + Sbjct: 61 RWNGVAVISRAGLDDVVSGLPDQPAYDGVMEPRALGATCGP-VRVWSVYVPNGREVGHPH 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W++ + P GDYN+ P D Y+P ++E T R + Sbjct: 120 YAYKLEWLEALRAAVAGDAAGTRPFAVMGDYNVAPGDEDVYDPAVFEGLTHVTPPERAAL 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +L+ G D + Y++WDY ++ KN+G+RID + + S A +D Sbjct: 180 AELRATGLGDLVPRPLKYDRPYTYWDYRQLAFPKNRGMRIDLVYANAAFRSAAKDAYVDR 239 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 + R SDH PV+V LD+ Sbjct: 240 EERKGKGASDHAPVVVDLDV 259 >gi|312141216|ref|YP_004008552.1| exodeoxyribonuclease iii [Rhodococcus equi 103S] gi|311890555|emb|CBH49873.1| exodeoxyribonuclease III [Rhodococcus equi 103S] Length = 266 Score = 208 bits (530), Expect = 5e-52, Method: Composition-based stats. Identities = 77/265 (29%), Positives = 126/265 (47%), Gaps = 7/265 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+RAR + W+ + D++ +QETK +D+ FP+E Y + G Sbjct: 1 MRIATWNVNSVRARTDRIVDWLARTDTDVLAMQETKCKDEQFPYERFTEAGYEVAHVGLS 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ-----TLRIGNLYLPHGNP 118 +NGVAI S+ ++ + EAT +R+ +LY+P+G Sbjct: 61 QWNGVAIASRIGLEDVQVGFADQPGFNKDPEAEATREARAIGATVGGVRVWSLYVPNGRE 120 Query: 119 ITSTKYDDKISWIKRFLRFASQRL--ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 +T Y K+ W+ + A L + + GD+N+ P D ++P +E + Sbjct: 121 LTDPHYVYKLEWLAKLRADAEGWLAGNPDAQIALVGDWNVAPTDEDVWDPAFFEGKTHTS 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 R +F GF D +R +Y++WDY + K +G+RID+++ SP + + Sbjct: 181 QPERDAFDAFAEAGFADVVRPHTPGPGVYTYWDYTQLRFPKRQGMRIDYVLGSPAFAARV 240 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSL 261 A ID R SDH PV+V L Sbjct: 241 TGAHIDRDERKGKGASDHAPVVVDL 265 >gi|193222381|emb|CAL62516.2| Putative exodeoxyribonuclease III [Herminiimonas arsenicoxydans] Length = 254 Score = 208 bits (530), Expect = 5e-52, Method: Composition-based stats. Identities = 99/259 (38%), Positives = 146/259 (56%), Gaps = 5/259 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS++ R+ + W+ +N D++CLQETKT D+ FP +++ Y + GQK Sbjct: 1 MKLATWNVNSLKVRLPQVQQWLVDNPVDVLCLQETKTVDEKFPVAEIEAAGYQVAFTGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAILS++ ++ + P D + Q Q +RI Y+P+G S K Sbjct: 61 TYNGVAILSRHPITDVTKNNPLLDDEQQRII-----AGTIQGIRIVCAYVPNGQSPDSDK 115 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K++W+K + +Q + L GDYNI P+ D ++P W + R +F Sbjct: 116 YIYKLNWLKALHEWLAQEQQQHPELALLGDYNIAPEDRDVHDPAAWAGQVLVSEPERAAF 175 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +LQ MGFTDA R LYS+WDY + N+G+RIDHI+LS + + ID Sbjct: 176 VRLQEMGFTDAFRMFEQPEKLYSWWDYRQMGFRLNRGLRIDHILLSAPLAARCSACVIDK 235 Query: 244 KPRGWTKPSDHTPVIVSLD 262 PR W +PSDHTPVI ++D Sbjct: 236 VPRKWEQPSDHTPVIATID 254 >gi|261343612|ref|ZP_05971257.1| exodeoxyribonuclease III [Providencia rustigianii DSM 4541] gi|282567993|gb|EFB73528.1| exodeoxyribonuclease III [Providencia rustigianii DSM 4541] Length = 271 Score = 208 bits (530), Expect = 5e-52, Method: Composition-based stats. Identities = 88/268 (32%), Positives = 130/268 (48%), Gaps = 8/268 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H LAA I+++ P++I LQETK D FP++ + L YH+ GQK Sbjct: 1 MKFISFNINGLRARPHQLAAIIEKHQPEVIGLQETKVHDDMFPYDEVSKLGYHVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122 ++ GVA+L K +PI + P DD D Q R I A N L + N Y P G Sbjct: 61 AHYGVALLLKNEPIAVRKGFPNDDEDAQRRIIMADIQTNQGLLTVVNGYFPQGESRDHPT 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACFT 176 K+ K + + + + E L+ GD NI P D + F Sbjct: 121 KFPAKQKFYQDLQDYVTSTQTPESQLLIMGDMNISPTDLDIGIGEVNRKRWLKTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +L + G D R H YS++DY + + N+G+RID ++ S + S Sbjct: 181 PEEREWLARLLDWGLVDTYREQHPDTTDSYSWFDYRSKGFDDNRGLRIDLLLASKKLASR 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + ID + RG KPSDH PV D+ Sbjct: 241 CTATGIDLEIRGMEKPSDHAPVWAEFDL 268 >gi|77459871|ref|YP_349378.1| exonuclease III [Pseudomonas fluorescens Pf0-1] gi|77383874|gb|ABA75387.1| exodeoxyribonuclease III [Pseudomonas fluorescens Pf0-1] Length = 270 Score = 208 bits (530), Expect = 5e-52, Method: Composition-based stats. Identities = 89/269 (33%), Positives = 135/269 (50%), Gaps = 11/269 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +RAR H LAA I+++ PD+I LQETK D FP E +++L YH+ GQK Sbjct: 1 MKIVSFNINGLRARPHQLAALIEKHQPDVIGLQETKVHDDQFPLEEVRALGYHVYFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122 + GVA+LS+ +PI + D+ D Q RFI TF N + I N Y P G Sbjct: 61 GHYGVALLSRQEPIAVHKGFATDEEDAQRRFIWGTFADANGVPVTIMNGYFPQGESRDHP 120 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE------NDACF 175 K+ K + + E+PL+ GD NI P+ D F Sbjct: 121 TKFPAKQRFYSDLQALLESQFHNEQPLVVMGDVNISPEDCDIGIGPDNMKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232 E R+ +L+N G TD+ R + +S++DY + + +G+RID I+ S Sbjct: 181 LPEEREWMARLKNWGLTDSFRHLNPDVTDTFSWFDYRSRGFEDEPKRGLRIDVILASHGL 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + +A +D + RG KPSDH P+ + L Sbjct: 241 LPRVKAAGVDYELRGMEKPSDHAPIWLEL 269 >gi|239945332|ref|ZP_04697269.1| putative exonuclease [Streptomyces roseosporus NRRL 15998] gi|239991789|ref|ZP_04712453.1| putative exonuclease [Streptomyces roseosporus NRRL 11379] gi|291448794|ref|ZP_06588184.1| exonuclease [Streptomyces roseosporus NRRL 15998] gi|291351741|gb|EFE78645.1| exonuclease [Streptomyces roseosporus NRRL 15998] Length = 259 Score = 208 bits (530), Expect = 5e-52, Method: Composition-based stats. Identities = 78/260 (30%), Positives = 128/260 (49%), Gaps = 1/260 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+NVNSI AR+ L AW++ + D++C+QETK + FP E L+ Y Sbjct: 1 MRIATYNVNSITARLPRLLAWLESSGTDVLCIQETKCTAEQFPAEALREAGYESAVNATG 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVA+LS+ ++VT LPG + A LR+ ++Y+P+G + Sbjct: 61 RWNGVALLSRVGLTDVVTGLPGGPEYDGVQEPRAISATCGP-LRLWSVYVPNGREVEHEH 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W++ + + P GD+N+ P D ++P ++E T R + Sbjct: 120 YAYKLRWLEALRKAVAADAAGSLPFAVLGDFNVAPTDEDVWDPALFEGATHVTPAERAAL 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 L+ G ++ Y+FWDY + KNKG+RID + T+ + + +D Sbjct: 180 AALEAEGLSEVHPRPLKYDRAYTFWDYRELRFPKNKGMRIDLTFGNAPFTAAVKDSYVDR 239 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 + R SDH PV+V LD+ Sbjct: 240 EERKGKGASDHAPVVVDLDL 259 >gi|33861041|ref|NP_892602.1| exodeoxyribonuclease III [Prochlorococcus marinus subsp. pastoris str. CCMP1986] gi|33639773|emb|CAE18943.1| exodeoxyribonuclease III [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length = 281 Score = 208 bits (530), Expect = 6e-52, Method: Composition-based stats. Identities = 94/275 (34%), Positives = 142/275 (51%), Gaps = 4/275 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+R R+ + WIKE NPDI+CLQETK D FP + L Y + GQK Sbjct: 1 MLIATWNVNSVRTRLSQIINWIKEVNPDILCLQETKVIDDAFPSSHFEELGYEVIIHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT----INTQTLRIGNLYLPHGNPI 119 SYNGVAI+SK++ + ++ L+I N+Y+P+G+ I Sbjct: 61 SYNGVAIISKFKIENVKKGFTNENKTGGISIDINEQKRLISAEINGLKIINVYVPNGSSI 120 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 S KYD KI W+ F +++ ++ + GD+NI P D + P +E + Sbjct: 121 DSEKYDYKIQWLNYLSAFLDDQVKNDDLVCLVGDFNIAPSEIDIHTPQKYEGGIMASKIE 180 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R++ + F D+ R +S+WDY +++ NKG RIDHI +S +S L S Sbjct: 181 REALNNVLKGRFIDSFRIFEKNTGHWSWWDYRNNAYELNKGWRIDHIYISKNLSSKLKSC 240 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDST 274 I+ R +PSDH PV+++L+I + D Sbjct: 241 VIERNQRENLQPSDHAPVLINLEIDSHYEDYLDVD 275 >gi|146282538|ref|YP_001172691.1| exonuclease III [Pseudomonas stutzeri A1501] gi|145570743|gb|ABP79849.1| exodeoxyribonuclease III [Pseudomonas stutzeri A1501] Length = 301 Score = 208 bits (530), Expect = 6e-52, Method: Composition-based stats. Identities = 83/271 (30%), Positives = 134/271 (49%), Gaps = 11/271 (4%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 +++ + ++N+N +RAR H L+A I+++ PD+I LQETK D+ FP +++L YH+ G Sbjct: 30 TLMKIVSFNINGLRARPHQLSAIIEKHQPDVIGLQETKVADEQFPQAEIEALGYHVHYHG 89 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPIT 120 QK + GVA+LS+ P+E+ P D + Q RFI F N Q + + N Y P G Sbjct: 90 QKGHYGVALLSRQAPLEVHKGFPSDGEESQKRFIWGRFADANGQPVTVMNGYFPQGESRA 149 Query: 121 ST-KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDA 173 K+ K + QR +E L GD+NI PQ D + Sbjct: 150 HPVKFPAKTKFYADLQALLEQRFSPDESLALMGDFNISPQDCDIGIGEVNAKRWLRTGKC 209 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKN--KGIRIDHIMLSP 230 F E R+ ++++ G D+ R + +S++DY + + +G+RID+I+ + Sbjct: 210 SFLPEEREWLERIKGWGLQDSFRTLNPEVVDRFSWFDYRSRGFEDEPRRGLRIDYILTTH 269 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + +D R KPSDH PV + L Sbjct: 270 ALHERVTDCGVDYDIRAMEKPSDHCPVWIEL 300 >gi|310767787|gb|ADP12737.1| hypothetical protein EJP617_30560 [Erwinia sp. Ejp617] Length = 303 Score = 208 bits (530), Expect = 6e-52, Method: Composition-based stats. Identities = 82/268 (30%), Positives = 123/268 (45%), Gaps = 8/268 (2%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 V+ ++N+N +RAR H L A ++++ PD+I LQETK D FP E + SL YH+ G Sbjct: 34 RVMKFVSFNINGLRARPHQLQAIVEQHQPDVIGLQETKVHDDMFPLEEVASLGYHVFCHG 93 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 QK + GVA+L K QP+ + GD+ D Q R I A L + N Y P G Sbjct: 94 QKGHYGVALLCKQQPVAVRRGFAGDNEDAQRRIIMADILTPAGPLTVINGYFPQGESRDH 153 Query: 122 T-KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDAC 174 K+ K + + + Q+ + + L+ GD NI + + Sbjct: 154 PTKFPAKEKFYRDLQSYLEQQQKADNQLLIMGDMNISSSDLDIGIGEESRKRWLRTGKCS 213 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 F E R+ L N G D R + + +S++DY + + N+G+RID I+ S Sbjct: 214 FLPEEREWMSTLMNWGLYDTWRTQNATVNDRFSWFDYRSKGFDDNRGLRIDLILASRPLA 273 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + ID R KPSDH P+ Sbjct: 274 DRCVATGIDYDIRAMEKPSDHAPIWAEF 301 >gi|239916752|ref|YP_002956310.1| Exodeoxyribonuclease III [Micrococcus luteus NCTC 2665] gi|281414790|ref|ZP_06246532.1| Exodeoxyribonuclease III [Micrococcus luteus NCTC 2665] gi|239837959|gb|ACS29756.1| Exodeoxyribonuclease III [Micrococcus luteus NCTC 2665] Length = 275 Score = 208 bits (530), Expect = 6e-52, Method: Composition-based stats. Identities = 76/274 (27%), Positives = 131/274 (47%), Gaps = 16/274 (5%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+RAR + A+++ ++ D++ +QETK D+NFP+E + Y + G Sbjct: 1 MKIATWNVNSLRARADRVEAFLERHDIDVLAIQETKCRDENFPWELFERAGYEVVHNGTS 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT------------INTQTLRIGNL 111 +NGVAI S+ ++ PG + + +R+ +L Sbjct: 61 QWNGVAIASRVGLSDVQRGFPGQPHFGKGGVDPQEESRAIGATVGAEAADGVAPVRLWSL 120 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIW 169 Y+P+G + K+ W++ A+ L + AGD+NI PQ D ++ ++ Sbjct: 121 YVPNGRGLEDEHMGYKLEWLRVLQEHAAAHLAEDPDTRLALAGDWNIAPQDEDVWDIELF 180 Query: 170 E--NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227 + + R +F ++ G D +R H +Y++WDY ++ K KG+RID + Sbjct: 181 QREGYTHVSPAERAAFHAFEDAGLVDVVRPRHPGPGVYTYWDYTGLAFPKKKGMRIDFQL 240 Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 SP + A I+ + R SDH PV+V L Sbjct: 241 CSPALARTVTDAWIEREERKGKGASDHAPVVVEL 274 >gi|254382239|ref|ZP_04997600.1| exonuclease [Streptomyces sp. Mg1] gi|194341145|gb|EDX22111.1| exonuclease [Streptomyces sp. Mg1] Length = 261 Score = 208 bits (530), Expect = 6e-52, Method: Composition-based stats. Identities = 77/260 (29%), Positives = 129/260 (49%), Gaps = 1/260 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+NVNSI AR+ L AW++ + D++C+QETK + FP E L+ L Y Sbjct: 1 MRIATFNVNSITARLPRLLAWLESSGTDVVCIQETKCSAEQFPHEQLRELGYEAAVNATG 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVA++SK ++VT LPG + A +R+ ++Y+P+G + Sbjct: 61 RWNGVALISKVGLEDVVTGLPGGPDYEGVQEPRAISATCGG-VRLWSVYVPNGREVEHDH 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W + ++ P GDYN+ P D ++P ++E T R + Sbjct: 120 YGYKLEWFRALTAAVAEDAAGPRPFAVLGDYNVAPTDEDVFDPAVFEGLTHVTPAERAAL 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + L+ G +D + Y++WDY ++ KN+G+RID + + + A +D Sbjct: 180 EALRAAGLSDVVPRPLKYDRPYTYWDYRQLAFPKNRGMRIDLVYGNEAFAKAVTDAYVDR 239 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 + R SDH PV+V L + Sbjct: 240 EERKGKGASDHAPVVVDLSL 259 >gi|212710738|ref|ZP_03318866.1| hypothetical protein PROVALCAL_01806 [Providencia alcalifaciens DSM 30120] gi|212686435|gb|EEB45963.1| hypothetical protein PROVALCAL_01806 [Providencia alcalifaciens DSM 30120] Length = 270 Score = 208 bits (530), Expect = 6e-52, Method: Composition-based stats. Identities = 86/268 (32%), Positives = 128/268 (47%), Gaps = 8/268 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A I+++ P++I LQETK D FP+E + L YH+ GQK Sbjct: 1 MKFISFNINGLRARPHQLEAIIEKHQPEVIGLQETKVHDDMFPYEEVSKLGYHVYYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122 ++ GVA+L K +PI + P DD + Q R I A N L + N Y P G Sbjct: 61 AHYGVALLLKNEPIAVRKGFPTDDEEAQRRIIMADIQTNEGILTVVNGYFPQGESRDHPT 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACFT 176 K+ K + + + + + L+ GD NI P D + F Sbjct: 121 KFPAKEKFYRDLQDYVTSTQTADSQLLIMGDMNISPTDLDIGIGDVNRKRWLKTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ ++L G D R H YS++DY + + N+G+RID ++ S + S Sbjct: 181 PEEREWLERLLGWGLVDTYREQHPDTTDRYSWFDYRSKGFDDNRGLRIDLLLASKKLASR 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + ID RG KPSDH PV D+ Sbjct: 241 CRATGIDYDIRGMEKPSDHAPVWAEFDL 268 >gi|239983300|ref|ZP_04705824.1| exonuclease [Streptomyces albus J1074] gi|291455127|ref|ZP_06594517.1| exonuclease [Streptomyces albus J1074] gi|291358076|gb|EFE84978.1| exonuclease [Streptomyces albus J1074] Length = 259 Score = 208 bits (529), Expect = 6e-52, Method: Composition-based stats. Identities = 76/258 (29%), Positives = 124/258 (48%), Gaps = 1/258 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSI AR+ L AW++ + D++C+QETKT ++ FP + L L Y Sbjct: 1 MRIATWNVNSITARLPRLLAWLESSGTDVLCIQETKTTEEAFPADALAELGYESAVRATG 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVAI+S+ ++V LPG A +R+ ++Y+P+G + Sbjct: 61 RWNGVAIVSRAGLDDVVGGLPGGPEYDGVEEPRAISATCGP-VRVWSVYVPNGREVGHPH 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W+K + P GDYNI P D ++P + T E R++ Sbjct: 120 FAYKLQWLKALRDAVADDAAGGRPFAVLGDYNIAPHDTDVWDPTAFIGATHVTPEEREAL 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 L+ G D + +++WDY + KN+G+RID + + + + A +D Sbjct: 180 AALRATGLDDVVPRPLKYDQPFTYWDYRQLGFPKNRGMRIDLVYGNDPFRAAVSDAYVDR 239 Query: 244 KPRGWTKPSDHTPVIVSL 261 + R SDH PV+ L Sbjct: 240 EERKGKGASDHAPVVTDL 257 >gi|153876175|ref|ZP_02003628.1| Endonuclease/exonuclease/phosphatase [Beggiatoa sp. PS] gi|152067361|gb|EDN66372.1| Endonuclease/exonuclease/phosphatase [Beggiatoa sp. PS] Length = 253 Score = 208 bits (529), Expect = 7e-52, Method: Composition-based stats. Identities = 91/259 (35%), Positives = 135/259 (52%), Gaps = 7/259 (2%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 ++ +ATWNVNS+R R+ +L W+ + PDII LQE K D+ FP +++ YH GQ Sbjct: 1 MLKIATWNVNSLRVRLPHLLDWLSNHQPDIIALQEIKVMDEQFPLAEIEAAGYHALFAGQ 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K+YNGVA+LS+ +I+T P + + LRI N+Y+P+G + S Sbjct: 61 KTYNGVALLSRKPGNDIITDFPDFNDPQRRFLGATYDK-----LRILNVYVPNGASVDSD 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 KY K+ W+ + + L+ LI GD+NI P+ D Y+PI W + R + Sbjct: 116 KYQYKLEWLTQLQNYICDNLKQYPRLIVLGDFNIAPEDQDVYDPIAWAGKILVSPPERTA 175 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 Q L ++G D R +S+WDY ++ +N GIRID I+ S ID Sbjct: 176 LQNLLHLGLKDTFRLFEQPVASFSWWDYRRGAFLRNHGIRIDLILASTAL--HCTGCTID 233 Query: 243 TKPRGWTKPSDHTPVIVSL 261 T PR +PSDH PV+ + Sbjct: 234 TAPRRLERPSDHAPVVATF 252 >gi|229822126|ref|YP_002883652.1| exodeoxyribonuclease III Xth [Beutenbergia cavernae DSM 12333] gi|229568039|gb|ACQ81890.1| exodeoxyribonuclease III Xth [Beutenbergia cavernae DSM 12333] Length = 263 Score = 208 bits (529), Expect = 7e-52, Method: Composition-based stats. Identities = 77/260 (29%), Positives = 131/260 (50%), Gaps = 4/260 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSIRAR +AAW++ ++ D++ LQETK D+ FP + ++ Y + G Sbjct: 1 MRIATWNVNSIRARAERVAAWLERSDVDVLALQETKVPDEQFPVMSFAAVGYDVVHHGHS 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ-TLRIGNLYLPHGNPITST 122 +NGVAI+S+ ++ PG EA T +R+ +LY+P+G + Sbjct: 61 QWNGVAIVSRVGIDDVELGFPGQPTWGDPAVAEARALGATCGGVRLWSLYVPNGRTLEDP 120 Query: 123 KYDDKISWIKRFLRFASQR-LELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 Y K+ W++ A+ E + AGD+NI P D ++ +++ + R Sbjct: 121 HYAYKLDWLRALRDAAATWAAEPGAQVALAGDWNIAPLDEDVWDMSLFDGATHVSPAERA 180 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +F L + GF + R Y++WDY + +N+G+RID ++ + + + I Sbjct: 181 AFAALDDAGFAEVTRLHVP--QAYTYWDYQRLRFPRNEGMRIDFVLATRALAERVAAVGI 238 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 D + R SDH PV+V + Sbjct: 239 DREERKGKGASDHVPVVVEI 258 >gi|325497093|gb|EGC94952.1| exonuclease III [Escherichia fergusonii ECD227] Length = 329 Score = 208 bits (529), Expect = 7e-52, Method: Composition-based stats. Identities = 77/268 (28%), Positives = 124/268 (46%), Gaps = 8/268 (2%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + ++N+N +RAR H L A ++++ PD+I LQETK D FP E + L Y++ G Sbjct: 60 ATMKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHG 119 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 QK + GVA+L+K PI + PGD + Q R I A + + N Y P G Sbjct: 120 QKGHYGVALLTKETPIAVRRGFPGDGEEAQRRIIMAEIPSPLGNVTVINGYFPQGESRDH 179 Query: 122 TK-YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDAC 174 + K + + + L+ + P++ GD NI P + + Sbjct: 180 PIKFPAKAQFYQNLQNYLETELKRDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCS 239 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 F E R+ ++L + G D R + +S++DY + + N+G+RID ++ S Sbjct: 240 FLPEEREWMERLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLA 299 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSL 261 ID + R KPSDH PV + Sbjct: 300 ECCVETGIDYEIRSMEKPSDHAPVWATF 327 >gi|70731287|ref|YP_261028.1| exonuclease III [Pseudomonas fluorescens Pf-5] gi|68345586|gb|AAY93192.1| exodeoxyribonuclease III [Pseudomonas fluorescens Pf-5] Length = 270 Score = 208 bits (529), Expect = 7e-52, Method: Composition-based stats. Identities = 90/269 (33%), Positives = 135/269 (50%), Gaps = 11/269 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +RAR H LAA I ++ PD+I LQETK D+ FP +Q+L YH+ GQK Sbjct: 1 MKIVSFNINGLRARPHQLAALIDKHQPDVIGLQETKVADEQFPLADIQALGYHVHYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122 + GVA+LS+ P+ + GDD D Q RFI TF N + I N Y P G Sbjct: 61 GHYGVALLSRQAPLALHKGFEGDDEDAQRRFIWGTFADANGTPVTIMNGYFPQGESRDHP 120 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175 K+ K + + R ++PL+ GD NI P+ D + F Sbjct: 121 TKFPAKERFYQDLQHLLESRFSNDQPLVVMGDVNISPEDCDIGIGAENAKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232 E R+ +L+N G D+ R + + +S++DY + + +G+RID IM S Sbjct: 181 LPEEREWMARLKNWGLVDSFRHLNPEVNDRFSWFDYRSRGFEDEPKRGLRIDLIMASQGL 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + A +D + RG KPSDH P+ + L Sbjct: 241 LPRVKDAGVDYELRGMEKPSDHAPIWLEL 269 >gi|238786156|ref|ZP_04630108.1| Exodeoxyribonuclease III [Yersinia bercovieri ATCC 43970] gi|238712925|gb|EEQ04985.1| Exodeoxyribonuclease III [Yersinia bercovieri ATCC 43970] Length = 271 Score = 208 bits (529), Expect = 7e-52, Method: Composition-based stats. Identities = 84/271 (30%), Positives = 129/271 (47%), Gaps = 8/271 (2%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 M + ++N+N +RAR H LAA I+++ PD+I LQETK D FP E + YH+ Sbjct: 1 MLTMKFVSFNINGLRARPHQLAAIIEQHQPDVIGLQETKVHDDMFPLEDVSQHGYHVFYH 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 GQK + GVA+L+K +P+ + P D+ D Q R I A L + N Y P G Sbjct: 61 GQKGHYGVALLTKEKPLAVRRGFPTDEEDAQRRIIMADIATPQGPLTVINGYFPQGESRD 120 Query: 121 STK-YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDA 173 + K + ++ Q+ + L+ GD NI P + + Sbjct: 121 HPIKFPAKERFYADLQQYLEQQHSADSQLLIMGDINISPTDLDIGIGEENRKRWLRTGKC 180 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 F E R +LQN G D RA + + +S++DY + + +N+G+RID ++ S Sbjct: 181 SFLPEERAWLAQLQNWGLVDTFRAANPECNDQFSWFDYRSRGFDENRGLRIDLLLASHPL 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + + ID + RG KPSDH PV + Sbjct: 241 AARCIATGIDYEIRGMEKPSDHAPVWSEFAL 271 >gi|162148012|ref|YP_001602473.1| putative exodeoxyribonuclease III [Gluconacetobacter diazotrophicus PAl 5] gi|161786589|emb|CAP56171.1| putative exodeoxyribonuclease III [Gluconacetobacter diazotrophicus PAl 5] Length = 259 Score = 208 bits (529), Expect = 7e-52, Method: Composition-based stats. Identities = 98/260 (37%), Positives = 140/260 (53%), Gaps = 3/260 (1%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 ++ +A+WNVNS+R R ++ W++ PD++ LQE K ED +FP E ++ Y GQ Sbjct: 1 MMKIASWNVNSVRQRQAHVLDWLEREKPDLLGLQEIKCEDASFPAEAFRAAGYDCVVVGQ 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 KSYNGVAILS+ I L GNLYLP+GN S Sbjct: 61 KSYNGVAILSRLPFSVTAR---ALPFLDGEALQARYVEIEAGGLTFGNLYLPNGNSGGSA 117 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 Y+ K+++++ A LE + AGDYN+ P DC + DA E R + Sbjct: 118 GYEAKLAFMEALALHARALLEAGRDFVLAGDYNVCPTDEDCAPGALPPTDALVRPESRAA 177 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F++L +G TDA+RA H Y+FWDY A +W ++ G+RIDH +LSP L SA+ D Sbjct: 178 FRRLIWLGLTDALRALHPHGRYYTFWDYQAGAWPRDCGLRIDHALLSPRIAERLDSAQPD 237 Query: 243 TKPRGWTKPSDHTPVIVSLD 262 RG +PSDH P++++LD Sbjct: 238 RDERGRAQPSDHVPLVITLD 257 >gi|330817688|ref|YP_004361393.1| Exodeoxyribonuclease III Xth [Burkholderia gladioli BSR3] gi|327370081|gb|AEA61437.1| Exodeoxyribonuclease III Xth [Burkholderia gladioli BSR3] Length = 258 Score = 208 bits (529), Expect = 8e-52, Method: Composition-based stats. Identities = 87/259 (33%), Positives = 129/259 (49%), Gaps = 1/259 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ R ++ W+ ++ D++CLQE K D FP L++ Y GQK Sbjct: 1 MKIATWNVNSLNVRKQHVLDWLATSHADVLCLQELKLTDDKFPKADLEAAGYRSWFTGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAIL + T + + + +RI + Y P+G S K Sbjct: 61 TYNGVAILVRDTLGVDETDVVKNIPGFEDPQQRV-IAATVNGVRIVSAYFPNGQAPDSEK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W+ + L L GDYNI P+ D ++P WE + + R F Sbjct: 120 FVYKLQWLDALRAWLKDELTRHPKLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 L MGF DA R +++WDY + +N G+RIDHI+LSP L + +D Sbjct: 180 AALLEMGFVDAFRRFEQPEKTFTWWDYRMMGFRRNAGLRIDHILLSPALAGTLTACEVDR 239 Query: 244 KPRGWTKPSDHTPVIVSLD 262 PR W +PSDHTPVI +++ Sbjct: 240 VPRTWEQPSDHTPVIATIE 258 >gi|319763690|ref|YP_004127627.1| exodeoxyribonuclease iii xth [Alicycliphilus denitrificans BC] gi|317118251|gb|ADV00740.1| exodeoxyribonuclease III Xth [Alicycliphilus denitrificans BC] Length = 258 Score = 208 bits (529), Expect = 8e-52, Method: Composition-based stats. Identities = 92/258 (35%), Positives = 143/258 (55%), Gaps = 1/258 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+NS+ R+ + AW+ N D I LQE K D+ FP + ++ YH GQK Sbjct: 1 MHLATWNINSLSVRLPQVLAWLAANPVDAIGLQELKLVDEKFPHDAFEAAGYHAVCFGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAI+S+ P ++V ++PG D + AT + LR+ N Y +G + K Sbjct: 61 TYNGVAIVSRTPPRDVVRNIPGHDDEQARVI-AATLDVEGGPLRLVNCYFVNGQAPGTDK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W+ + L L+ GD+N+ P+ D Y+P+ ++ T+E RQ F Sbjct: 120 FAYKLQWLAALHDWLRAELAAHPRLVLVGDFNVAPEDRDSYDPVGLKDTIHHTVEERQHF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 ++L +G TDA R YS+WDY + KN+G+RIDHI++S + + + RID Sbjct: 180 RQLLELGLTDAFRMFEQPEKSYSWWDYRQLGFQKNRGLRIDHILVSEALRAGVTACRIDR 239 Query: 244 KPRGWTKPSDHTPVIVSL 261 PR +PSDH PV+ +L Sbjct: 240 APRKNPQPSDHAPVVATL 257 >gi|322832771|ref|YP_004212798.1| exodeoxyribonuclease III [Rahnella sp. Y9602] gi|321167972|gb|ADW73671.1| exodeoxyribonuclease III [Rahnella sp. Y9602] Length = 269 Score = 208 bits (529), Expect = 8e-52, Method: Composition-based stats. Identities = 84/268 (31%), Positives = 130/268 (48%), Gaps = 8/268 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H LAA I+++ PD+I LQETK D FP E + YH+ GQK Sbjct: 1 MKFVSFNINGLRARPHQLAAIIEQHQPDVIGLQETKVHDDMFPLEEVSQHGYHVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122 + GVA+L+K +P+ + PGDD + Q R I L + N Y P G Sbjct: 61 GHYGVAMLTKQEPVAVRRGFPGDDEESQRRIIMTDIETPQGILTVINGYFPQGESRDHPT 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + + + + L + P++ GD NI P D + F Sbjct: 121 KFPAKEKFYRDLQDYLTTSLSVNNPVVVMGDVNISPTDLDIGIGEDSRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +L+ G D RA + +S++DY + + +N+G+RID IM S + Sbjct: 181 PEEREWMDRLKGWGLIDTFRAANPDTADKFSWFDYRSRGFDENRGLRIDLIMASTPLAAR 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + ID RG +PSDH P+ + D+ Sbjct: 241 CIATGIDYDIRGMERPSDHAPIWATFDL 268 >gi|295096134|emb|CBK85224.1| Exodeoxyribonuclease III [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 268 Score = 208 bits (529), Expect = 8e-52, Method: Composition-based stats. Identities = 81/268 (30%), Positives = 127/268 (47%), Gaps = 8/268 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A ++++ PD+I LQETK D FP E + L Y++ GQK Sbjct: 1 MKFVSFNINGLRARPHQLEAIVEQHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122 + GVA+L+K P+ + PGDD + Q R I A + + N Y P G T Sbjct: 61 GHYGVALLTKDTPVSVRRGFPGDDEEAQRRIIMAEIPSALGNVTVINGYFPQGESRDHET 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + + + + L+ E P++ GD NI P + + F Sbjct: 121 KFPAKAKFYQDLQNYLTTELKKENPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ ++L G D R + T +S++DY + + N+G+RID ++ S Sbjct: 181 PEEREWMERLLGWGLVDTFRTANPATQDRFSWFDYRSKGFDDNRGLRIDLLLASAPLAER 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 ID R KPSDH PV + + Sbjct: 241 CIETGIDYDIRSMEKPSDHAPVWATFKL 268 >gi|283478229|emb|CAY74145.1| xthA [Erwinia pyrifoliae DSM 12163] Length = 300 Score = 208 bits (529), Expect = 8e-52, Method: Composition-based stats. Identities = 82/268 (30%), Positives = 123/268 (45%), Gaps = 8/268 (2%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 V+ ++N+N +RAR H L A ++++ PD+I LQETK D FP E + SL YH+ G Sbjct: 31 RVMKFVSFNINGLRARPHQLQAIVEQHQPDVIGLQETKVHDDMFPLEEVASLGYHVFCHG 90 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 QK + GVA+L K QP+ + GD+ D Q R I A L + N Y P G Sbjct: 91 QKGHYGVALLCKQQPVAVRRGFAGDNEDAQRRIIMADILTPAGPLTVINGYFPQGESRDH 150 Query: 122 T-KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDAC 174 K+ K + + + Q+ + + L+ GD NI + + Sbjct: 151 PTKFPAKEKFYRDLQSYLEQQQKADNQLLIMGDMNISSSDLDIGIGEESRKRWLRTGKCS 210 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 F E R+ L N G D R + + +S++DY + + N+G+RID I+ S Sbjct: 211 FLPEEREWMSTLMNWGLYDTWRTQNATVNDRFSWFDYRSKGFDDNRGLRIDLILASRPLA 270 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + ID R KPSDH P+ Sbjct: 271 DRCVATGIDYDIRAMEKPSDHAPIWAEF 298 >gi|37519709|ref|NP_923086.1| exodeoxyribonuclease III [Gloeobacter violaceus PCC 7421] gi|35210700|dbj|BAC88081.1| exodeoxyribonuclease III [Gloeobacter violaceus PCC 7421] Length = 258 Score = 208 bits (529), Expect = 8e-52, Method: Composition-based stats. Identities = 93/261 (35%), Positives = 143/261 (54%), Gaps = 4/261 (1%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 MS +TVATWNVNSI R+ + AW+ + P+++CLQETK D+ FP ++L Y + Sbjct: 1 MSNLTVATWNVNSINVRLGGVCAWLSAHRPEVLCLQETKVPDERFPVAAFEALGYEVAFA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 GQK+YNGVAI+S+ + LPGD+ D R I AT I N+Y+P+G+ Sbjct: 61 GQKAYNGVAIVSRKPVTVVRRGLPGDEADAPRRLIAATVEDTQ----IINVYVPNGSEAG 116 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 S K+ K+ W++R ++ + + ++ GD+NI P+ D ++P F + Sbjct: 117 SEKFAYKLLWLERLRQYLLADFDPKAAVLLCGDFNIAPEERDVWDPKAVAGKVLFHPDEH 176 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + ++++ GF DA R +S+WDY A ++ +N G+RIDHI +S + Sbjct: 177 AALERIRTWGFIDAFRLHSPAAGQFSWWDYRAAAFRRNLGMRIDHIWVSSPLAERCSACW 236 Query: 241 IDTKPRGWTKPSDHTPVIVSL 261 ID +PR PSDH PV S Sbjct: 237 IDAQPRAQPSPSDHVPVAASF 257 >gi|85709819|ref|ZP_01040884.1| Probable exodeoxyribonuclease III [Erythrobacter sp. NAP1] gi|85688529|gb|EAQ28533.1| Probable exodeoxyribonuclease III [Erythrobacter sp. NAP1] Length = 272 Score = 208 bits (529), Expect = 8e-52, Method: Composition-based stats. Identities = 97/269 (36%), Positives = 150/269 (55%), Gaps = 8/269 (2%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 S + +AT+N+N I+AR+ L W++E P + CLQE K++DK+FP + L Y G Sbjct: 3 SAMKIATYNINGIKARLPRLKEWLEETRPAVACLQEVKSQDKDFPASEFEELGYQAIWHG 62 Query: 62 QKSYNGVAILSKYQPIEIVT--------HLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 QK++NGVAIL+ + P + QAR++E T + T RI +YL Sbjct: 63 QKAFNGVAILADTKAGYSAKEVQRGLGIDGPKEGEGEQARYLEVDVTRESSTCRIVCIYL 122 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 P+GNP K+D K++W+++ +Q E E P GD+N+IP+ D ++ +DA Sbjct: 123 PNGNPQPGPKFDYKLAWMEKLRGRMAQIWESEVPAAVLGDFNVIPEDDDVFSVKAMASDA 182 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 E R ++ +L G+TDA+R + ++++WDY A +W ++ G RIDHI+LSPE Sbjct: 183 LMQPESRAAYARLLADGWTDALRTHNPRGGVWTYWDYQAGAWQRDHGFRIDHILLSPELA 242 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 L S +D + RG K SDH P L+ Sbjct: 243 DRLVSVGVDREHRGREKASDHAPTWAKLN 271 >gi|157370955|ref|YP_001478944.1| exonuclease III [Serratia proteamaculans 568] gi|157322719|gb|ABV41816.1| exodeoxyribonuclease III [Serratia proteamaculans 568] Length = 268 Score = 208 bits (529), Expect = 8e-52, Method: Composition-based stats. Identities = 85/268 (31%), Positives = 133/268 (49%), Gaps = 8/268 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H LAA I+++ PD+I LQETK D FP E + YH+ GQK Sbjct: 1 MKFVSFNINGLRARPHQLAAIIEQHQPDVIGLQETKVHDDMFPLEEVSQHGYHVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122 + GVA+L+K +P+ + P DD D Q R I A TL + N Y P G Sbjct: 61 GHYGVALLTKEKPLAVRRGFPTDDEDAQRRIIMADLATPQGTLTVINGYFPQGESRDHPT 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC------YNPIIWENDACFT 176 K+ K + + + Q++ ++ P++ GD NI P +D + F Sbjct: 121 KFPAKTRFYQDLQNYLEQQMSVDSPVLVMGDVNISPSDYDIGIGEESRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +L N G D R + + +S++DY + + +N+G+RID ++ S + Sbjct: 181 PEEREWMDRLMNWGLVDTYRHANPERNDQFSWFDYRSRGFDENRGLRIDLLLASTPLAAR 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + ID + RG KPSDH PV + Sbjct: 241 CTATGIDYQIRGMEKPSDHAPVWAEFSL 268 >gi|260463071|ref|ZP_05811274.1| exodeoxyribonuclease III Xth [Mesorhizobium opportunistum WSM2075] gi|259031192|gb|EEW32465.1| exodeoxyribonuclease III Xth [Mesorhizobium opportunistum WSM2075] Length = 256 Score = 208 bits (528), Expect = 8e-52, Method: Composition-based stats. Identities = 90/257 (35%), Positives = 132/257 (51%), Gaps = 3/257 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+N+N+I +R+ NL AW+ PD++CLQE K D FP L Y G+ Sbjct: 1 MKIATFNINNINSRLENLLAWLAAARPDVVCLQELKARDMQFPRTALADAGYGAVWKGEP 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 ++NGVAIL++ + + I LY P+GNP K Sbjct: 61 TWNGVAILARGAEPILTRDAL---PGDDGDKQSRYIEAAVNGIVIACLYAPNGNPRPGPK 117 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K++W +R A Q ++ P++ AGDYNI+P+P D Y ++++A E R +F Sbjct: 118 FQYKLAWHERLNAHAEQLIDTGLPVVLAGDYNIVPEPRDIYATRSYDDNALVQPESRAAF 177 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 L G+TDA+R H LY+FWDY + W ++ G+R+DHI+LS L A ID Sbjct: 178 AALLEQGWTDALRKKHPNETLYTFWDYRRNRWPRDAGLRLDHILLSKTLARRLKGAGIDR 237 Query: 244 KPRGWTKPSDHTPVIVS 260 RG SDH PV V Sbjct: 238 DVRGQDGASDHAPVWVE 254 >gi|261821541|ref|YP_003259647.1| exonuclease III [Pectobacterium wasabiae WPP163] gi|261605554|gb|ACX88040.1| exodeoxyribonuclease III [Pectobacterium wasabiae WPP163] Length = 272 Score = 208 bits (528), Expect = 8e-52, Method: Composition-based stats. Identities = 90/266 (33%), Positives = 127/266 (47%), Gaps = 8/266 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V ++N+N +RAR H LAA I+++ PD+I LQETK D FP E + YH+ GQK Sbjct: 5 MKVVSFNINGLRARPHQLAAIIEQHQPDVIGLQETKVHDDMFPLEDVSQYGYHVYYHGQK 64 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122 + GVA+L K QPI + P D+ D Q R I A F TL + N Y P G Sbjct: 65 GHYGVALLCKEQPIAVRRGFPTDEDDAQRRIIMADFATEHGTLTVVNGYFPQGESRDHPV 124 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + + + Q +PLI GD NI P + + F Sbjct: 125 KFPAKTRFYQDLQTYLEQHHSATQPLIVMGDVNISPTDLDIGIGEENRKRWLRTGKCSFL 184 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +LQ G D RA + + +S++DY + + N+G+RID I+ S Sbjct: 185 PEEREWMARLQGWGLIDTFRAANPESNDRFSWFDYRSAGFDDNRGLRIDLILASTFLAER 244 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 + ID RG KPSDH P+ Sbjct: 245 CVATGIDYDIRGMEKPSDHAPIWAEF 270 >gi|293395887|ref|ZP_06640169.1| exodeoxyribonuclease III [Serratia odorifera DSM 4582] gi|291421824|gb|EFE95071.1| exodeoxyribonuclease III [Serratia odorifera DSM 4582] Length = 268 Score = 208 bits (528), Expect = 9e-52, Method: Composition-based stats. Identities = 88/268 (32%), Positives = 130/268 (48%), Gaps = 8/268 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H LAA I+++ PD+I LQETK D FP E + YH+ GQK Sbjct: 1 MKFVSFNINGLRARPHQLAAIIEQHQPDVIGLQETKVHDDMFPLEEVSKHGYHVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122 + GVA+L+K PI + P DD D Q R I A L + N Y P G Sbjct: 61 GHYGVALLTKEAPIAVRRGFPTDDDDAQRRIIMADLETPQGMLTVINGYFPQGESRDHPV 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACFT 176 K+ K + + + Q+L +E P++ GD NI P +D + F Sbjct: 121 KFPAKTRFYQDLQDYLEQQLSVENPVLIMGDMNISPSDYDIGIGEENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +L N G D R + + +S++DY + + N+G+RID ++ S + Sbjct: 181 PEEREWMGRLLNWGLVDTYRQANPERNDQFSWFDYRSKGFDDNRGLRIDLLLASTPLAAR 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + ID + R KPSDH PV DI Sbjct: 241 CVATGIDYQTRSMEKPSDHAPVWAEFDI 268 >gi|183980766|ref|YP_001849057.1| exodeoxyribonuclease III protein XthA [Mycobacterium marinum M] gi|183174092|gb|ACC39202.1| exodeoxyribonuclease III protein XthA [Mycobacterium marinum M] Length = 276 Score = 208 bits (528), Expect = 9e-52, Method: Composition-based stats. Identities = 78/266 (29%), Positives = 124/266 (46%), Gaps = 7/266 (2%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +ATWNVNSIR R+ + W++ + D++ +QETK D FP L L Y + G Sbjct: 5 TLRLATWNVNSIRTRLPRVLDWLERADVDVLAIQETKCSDTQFPALPLFELGYEVAHVGF 64 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT-----LRIGNLYLPHGN 117 +NGVAI S+ ++ G + A +R+ +LY+P+G Sbjct: 65 NQWNGVAIASRVGIDDVQIGFDGQPAWSGKPEVAAAAEARAVGATCGGVRVWSLYVPNGR 124 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEE--PLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + Y K+ W+ A L+ + P+ AGD+NI P D ++ + Sbjct: 125 ALEDPHYTYKLDWLAALRDTAQCWLKNDPGAPIALAGDFNIAPTDEDVWSTEFFTGATHV 184 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 + R++F + + FTD +R +Y++WDY + K +G+RID I+ SP Sbjct: 185 SEPERKAFNAIVDAQFTDLVRPFTPGPGVYTYWDYTQLRFPKKQGMRIDFILGSPALAGR 244 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 + A+I R PSDH PV V L Sbjct: 245 VVDAQIVRDERKGKAPSDHAPVFVDL 270 >gi|225077187|ref|ZP_03720386.1| hypothetical protein NEIFLAOT_02242 [Neisseria flavescens NRL30031/H210] gi|224951478|gb|EEG32687.1| hypothetical protein NEIFLAOT_02242 [Neisseria flavescens NRL30031/H210] Length = 256 Score = 208 bits (528), Expect = 9e-52, Method: Composition-based stats. Identities = 91/259 (35%), Positives = 138/259 (53%), Gaps = 4/259 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ R+ + W+ ++ DI+ LQE K + FP LQ + +H GQK Sbjct: 1 MKIATWNVNSLNVRLPQVQNWLADHQADILALQELKLDQDKFPAAALQMMGWHCVWSGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAI+S+++P ++ LP D Q R I AT +R+ N+Y +G + S K Sbjct: 61 TYNGVAIISRHEPQDVHCGLPALPDDPQRRVIAATING----VRVINVYCVNGEALDSPK 116 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K W F + + L+ GD+NI P DCY+P W + RQ F Sbjct: 117 FQYKEQWFAALTEFVRTEMAVHPKLVLLGDFNIAPADADCYDPEKWHEKIHCSSIERQWF 176 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + L ++G TD++R H Y+++DY + + G+RIDHI+ SPE + L +D Sbjct: 177 KTLLDLGLTDSLRKVHPEGAFYTWFDYRGAMFQRKLGLRIDHILTSPELAATLTDVTVDL 236 Query: 244 KPRGWTKPSDHTPVIVSLD 262 + R +PSDH PVI D Sbjct: 237 ETRAQERPSDHAPVIAEFD 255 >gi|319639504|ref|ZP_07994253.1| exodeoxyribonuclease III [Neisseria mucosa C102] gi|317399270|gb|EFV79942.1| exodeoxyribonuclease III [Neisseria mucosa C102] Length = 256 Score = 208 bits (528), Expect = 9e-52, Method: Composition-based stats. Identities = 91/259 (35%), Positives = 137/259 (52%), Gaps = 4/259 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ R+ + W+ ++ DI+ LQE K + FP LQ + +H GQK Sbjct: 1 MKIATWNVNSLNVRLPQVQNWLADHQADILALQELKLDQDKFPAAALQMMGWHCVWSGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAI+S+++P ++ LP D Q R I AT +R+ N+Y +G + S K Sbjct: 61 TYNGVAIISRHEPQDVHCGLPALPDDPQRRVIAATING----VRVINVYCVNGEALDSPK 116 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K W F + L+ GD+NI P DCY+P W + RQ F Sbjct: 117 FQYKEQWFAALTEFVRAEMAAHPKLVLLGDFNIAPADADCYDPEKWHEKIHCSSIERQWF 176 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + L ++G TD++R H Y+++DY + + G+RIDHI+ SPE + L +D Sbjct: 177 KNLLDLGLTDSLRKVHPEGAFYTWFDYRGAMFQRKLGLRIDHILTSPELAANLTDVTVDL 236 Query: 244 KPRGWTKPSDHTPVIVSLD 262 + R +PSDH PVI D Sbjct: 237 ETRAQERPSDHAPVIAEFD 255 >gi|146311351|ref|YP_001176425.1| exonuclease III [Enterobacter sp. 638] gi|145318227|gb|ABP60374.1| Exodeoxyribonuclease III [Enterobacter sp. 638] Length = 268 Score = 208 bits (528), Expect = 9e-52, Method: Composition-based stats. Identities = 85/268 (31%), Positives = 127/268 (47%), Gaps = 8/268 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A ++++ PD+I LQETK D FP E + L Y++ GQK Sbjct: 1 MKFVSFNINGLRARPHQLEAIVEQHQPDVIGLQETKVHDDMFPLEDVAKLGYNVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122 + GVA+L+K PI + PGDD + Q R I A + + N Y P G Sbjct: 61 GHYGVALLTKQTPISVRRGFPGDDGEAQRRIIMAEIPSPLGNITVINGYFPQGESRDHPT 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + + + + L E P++ GD NI P D + F Sbjct: 121 KFPAKAKFYQDLQDYLTTELNKENPVLIMGDVNISPTDLDIGIGEDSRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ Q+LQ+ G D RA + +S++DY + + N+G+RID ++ S Sbjct: 181 PEEREWMQRLQSWGLVDTFRAANPDTQDRFSWFDYRSKGFDDNRGLRIDLLLASAPLAER 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 ID RG KPSDH PV + Sbjct: 241 CIETGIDYDIRGMEKPSDHAPVWAKFKL 268 >gi|114330240|ref|YP_746462.1| exodeoxyribonuclease III Xth [Nitrosomonas eutropha C91] gi|114307254|gb|ABI58497.1| Exodeoxyribonuclease III [Nitrosomonas eutropha C91] Length = 254 Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 91/258 (35%), Positives = 138/258 (53%), Gaps = 5/258 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS++ R+ + W+ N PD++CLQETK +D+ FP + L Y GQK Sbjct: 1 MKIATWNVNSLKVRLQQVIDWLNVNQPDVLCLQETKLQDEFFPVDELAQAGYQSIYAGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVA+LSK +++ LP D + LRI +Y+P+G + S K Sbjct: 61 TYNGVALLSKVTGVDVCAALPDFDDPQKRLIAATYGD-----LRIICVYVPNGERVDSEK 115 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W+ F Q + GD+NI P+ D Y+P W+ + RQ+F Sbjct: 116 YAYKLRWLSILNSFLQQERTRYGKVALLGDFNIAPEDRDVYDPEAWKGQVLCSEAERQAF 175 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + L + GF D+ +Y++WDY ++ +N+G+RIDHI+LS E + ++D Sbjct: 176 RGLLDTGFVDSFHLFEQPEKIYTWWDYRMMAFRRNRGLRIDHILLSHETADSCATWQVDK 235 Query: 244 KPRGWTKPSDHTPVIVSL 261 PR +PSDH PV V L Sbjct: 236 APRKLERPSDHAPVWVEL 253 >gi|188581164|ref|YP_001924609.1| exodeoxyribonuclease III Xth [Methylobacterium populi BJ001] gi|179344662|gb|ACB80074.1| exodeoxyribonuclease III Xth [Methylobacterium populi BJ001] Length = 264 Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 115/261 (44%), Positives = 160/261 (61%), Gaps = 3/261 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + TWNVNSI+ R+ +L ++ E PD++CLQE K +D +FP E +++ Y +ET GQK Sbjct: 1 MRITTWNVNSIKQRVGHLLGFLDEAKPDVVCLQELKCQDTSFPREEIEAAGYAVETLGQK 60 Query: 64 SYNGVAILSKYQPIEIV--THLPGDDLDVQARFIEATFTINTQ-TLRIGNLYLPHGNPIT 120 +YNGVA+L + LPGD D QAR+IEA +RI ++YLP+GNP Sbjct: 61 AYNGVALLVRAPLQYTQLLRGLPGDAEDEQARYIEALVHGEGVAPVRIASIYLPNGNPAP 120 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 KY K++++ R A + E+ L+ AGD+N+IP+P D +P W DA F E R Sbjct: 121 GPKYSYKLAFMARLKAHARALMASEDALVLAGDFNVIPEPEDAADPAAWTQDALFLPETR 180 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 ++F+ L GFTD +RA + LY+FWDY A W +N GIRIDH++LSP+A L SA Sbjct: 181 RAFRALLAEGFTDGLRACEPSAGLYTFWDYQAGCWPRNFGIRIDHLLLSPQAADRLVSAS 240 Query: 241 IDTKPRGWTKPSDHTPVIVSL 261 + RG KPSDH PV V L Sbjct: 241 VQKHLRGLEKPSDHVPVTVEL 261 >gi|88813684|ref|ZP_01128912.1| exodeoxyribonuclease III [Nitrococcus mobilis Nb-231] gi|88789071|gb|EAR20210.1| exodeoxyribonuclease III [Nitrococcus mobilis Nb-231] Length = 256 Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 93/258 (36%), Positives = 146/258 (56%), Gaps = 5/258 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A+WNVNS++ R+ + W+K PD++ LQETK D++FP E L++ Y + GQK Sbjct: 1 MKLASWNVNSLKVRLPQVLEWLKTAQPDLLGLQETKVPDEHFPSEALRAAGYEVVYSGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVA+LS++ E++T +L A + LR NLY+P+G + S K Sbjct: 61 TYNGVAVLSRWSITEMLT-----ELPTLADPQRRVLAVTAAGLRFINLYVPNGQAVGSDK 115 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W+ + ++ LE I GD+NI PQ D ++P W + R++ Sbjct: 116 YAYKLDWLAHLRGWLAEELERWPRSIVVGDFNIAPQDQDVHDPQQWHEQVLCSTPEREAL 175 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q L +GF D+ R ++S+WDY +S+ +N+G+RID I+ S T L ++ +D Sbjct: 176 QALLALGFADSFRQFPQEPGIFSWWDYRMNSFRRNRGLRIDLILSSAALTRTLTASYVDR 235 Query: 244 KPRGWTKPSDHTPVIVSL 261 PRGW +PSDH PV+ L Sbjct: 236 GPRGWPRPSDHAPVVAEL 253 >gi|251789807|ref|YP_003004528.1| exodeoxyribonuclease III [Dickeya zeae Ech1591] gi|247538428|gb|ACT07049.1| exodeoxyribonuclease III [Dickeya zeae Ech1591] Length = 268 Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 89/268 (33%), Positives = 133/268 (49%), Gaps = 8/268 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H LAA I+++ PD+I LQETK D FP + ++ YH+ GQK Sbjct: 1 MKFVSFNINGLRARPHQLAAIIEQHQPDVIGLQETKVHDDMFPLDEVKQFGYHVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122 + GVA+L+K +P+ + P DD D Q R I A TL + N Y P G Sbjct: 61 GHYGVALLTKAEPLAVRRGFPTDDDDAQRRIIMADLATPLGTLTVVNGYFPQGESRDHPV 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACFT 176 K+ K + + + Q + E+P++ GD NI P D + F Sbjct: 121 KFPAKTRFYQDLQHYLEQHHQSEQPVLIMGDMNISPADQDIGIGEENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ ++L+N G D RA + +S++DY + + N+G+RID IM +P S Sbjct: 181 PEEREWMERLKNWGLVDTFRAANPECQDRFSWFDYRSAGFDDNRGLRIDLIMATPPLASR 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + ID RG KPSDH PV + Sbjct: 241 CAATGIDYAIRGMEKPSDHAPVWAEFTL 268 >gi|78212211|ref|YP_380990.1| exodeoxyribonuclease III [Synechococcus sp. CC9605] gi|78196670|gb|ABB34435.1| exodeoxyribonuclease III [Synechococcus sp. CC9605] Length = 288 Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 91/276 (32%), Positives = 140/276 (50%), Gaps = 4/276 (1%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 S V +ATWNVNS+R R+ + +W+ PD++CLQETK +D FP E +S +H+ G Sbjct: 10 STVQIATWNVNSVRTRLDQVLSWLDREQPDLLCLQETKVDDSLFPVEAFKSAGWHVHIHG 69 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR----FIEATFTINTQTLRIGNLYLPHGN 117 QK+YNGVA++S+ ++ G+ D + + +R+ NLY+P+G+ Sbjct: 70 QKAYNGVALISREPLEDVRCGFVGELPDDAEADDLGAQKRVISALLSGVRVLNLYVPNGS 129 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + S KY K++W+ R+ + + EPL GD+NI + D +P + Sbjct: 130 SLKSEKYPYKLTWLGCLKRYLDAQQQRGEPLCMVGDFNIGLEARDLPDPDRQTGGIMASD 189 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 RQ+ + D R +S+WDY + +W +++G RIDHI L E L Sbjct: 190 AERQALRDALGDRLQDVFRVFEPDSGHWSWWDYRSGAWDRDRGWRIDHIYLCDELLGLAR 249 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDS 273 S I RG +PSDH PV V LD P + + D Sbjct: 250 SCVIHKGMRGNQQPSDHAPVSVDLDWPPADEDEGDE 285 >gi|126657177|ref|ZP_01728343.1| Exodeoxyribonuclease III xth [Cyanothece sp. CCY0110] gi|126621448|gb|EAZ92159.1| Exodeoxyribonuclease III xth [Cyanothece sp. CCY0110] Length = 262 Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 90/262 (34%), Positives = 142/262 (54%), Gaps = 4/262 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSIR R ++ W+ N+ D++CLQETK D++FP E + L YH+ GQK Sbjct: 1 MKIATWNVNSIRTRKPHVVDWLTNNSIDVLCLQETKVIDQDFPREPFEELGYHVYIYGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT---QTLRIGNLYLPHGNPIT 120 +YNGVAI S+ +++T + A+ + + + +RI NLY+P+G + Sbjct: 61 AYNGVAIFSRQPMTDVITGFTPMVGEEIAQQFDEQKRVISGVIDGIRIINLYVPNGASVG 120 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPL-IFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 S KY+ K+ W K + ++ E GD+NI + D YN EN + Sbjct: 121 SEKYEYKLQWFKVLKAYLDNLIKKESYELCICGDFNIALEDKDIYNSKGKENHIMSSPLE 180 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R++ +K+ +G DA R +S+WDY + +N+G RIDH+ L+ + + Sbjct: 181 REALEKILKIGLKDAFRKFTTEGGHFSWWDYRSGGLQRNRGWRIDHLYLTNKLYEKAVNC 240 Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261 ID +PR +PSDHTPVI+ + Sbjct: 241 TIDIEPRKQERPSDHTPVILEI 262 >gi|221198450|ref|ZP_03571496.1| exodeoxyribonuclease III [Burkholderia multivorans CGD2M] gi|221208601|ref|ZP_03581602.1| exodeoxyribonuclease III [Burkholderia multivorans CGD2] gi|221171592|gb|EEE04038.1| exodeoxyribonuclease III [Burkholderia multivorans CGD2] gi|221182382|gb|EEE14783.1| exodeoxyribonuclease III [Burkholderia multivorans CGD2M] Length = 272 Score = 208 bits (528), Expect = 1e-51, Method: Composition-based stats. Identities = 85/258 (32%), Positives = 134/258 (51%), Gaps = 1/258 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ R ++ W+ ++ D++CLQE K D+ FP L++ Y GQK Sbjct: 15 MKIATWNVNSLNVRKQHVLDWLAQSAVDVLCLQELKLPDEKFPRADLEAAGYRSWFAGQK 74 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAIL++ + + + + + +RI + Y P+G + S K Sbjct: 75 TYNGVAILARDTLPFDESDVVRNIPGFEDTQQRV-IAVTIDGVRIVSAYFPNGQAVGSDK 133 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W+ + ++ L GDYNI P+ D ++P WE + + + R F Sbjct: 134 FLYKMQWLDALHAWLRAEMQRYPKLALLGDYNIAPEDRDVHDPAKWEGENLVSPQERAHF 193 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 KL +GF DA R +++WDY ++ +N G+RIDHI+LSP S +D Sbjct: 194 AKLIELGFVDAFRRFEQPEKTFTWWDYRMFAFRRNAGLRIDHILLSPALAGSCTSCEVDR 253 Query: 244 KPRGWTKPSDHTPVIVSL 261 PR W +PSDHTPV+ L Sbjct: 254 VPRTWEQPSDHTPVVAVL 271 >gi|309379045|emb|CBX22347.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 256 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 91/260 (35%), Positives = 133/260 (51%), Gaps = 4/260 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + TWNVNS+ R+ + + +N PDI+ LQE K + FP LQ + +H GQK Sbjct: 1 MKITTWNVNSLNVRLPQVQNLLADNPPDILVLQELKLDQDKFPAAALQMMGWHCVWSGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAI+S+ P ++ LP D Q R I AT +R+ N+Y +G + S K Sbjct: 61 TYNGVAIVSRNAPEDVHFGLPSLPDDPQRRVIAATVGG----VRVINVYCVNGEALDSPK 116 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K W F + L+ GD+NI P DCY+P W + RQ F Sbjct: 117 FKYKEQWFAALTEFVRDEMTRYGKLVLLGDFNIAPADADCYDPKKWYEKIHCSSVERQWF 176 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q L ++G TD++R H Y+++DY + + G+RIDHI++SP L R+D Sbjct: 177 QNLLDLGLTDSLRQVHPEGVFYTWFDYRGAMFQRKLGLRIDHILVSPAMAEALKDVRVDL 236 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 R +PSDH PV D+ Sbjct: 237 DTRALERPSDHAPVTAEFDL 256 >gi|255066148|ref|ZP_05318003.1| exodeoxyribonuclease III [Neisseria sicca ATCC 29256] gi|255049693|gb|EET45157.1| exodeoxyribonuclease III [Neisseria sicca ATCC 29256] Length = 256 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 88/260 (33%), Positives = 138/260 (53%), Gaps = 4/260 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + TWNVNS+ R+ + W+ ++ PD++ LQE K + FP LQ + +H GQK Sbjct: 1 MKITTWNVNSLNVRLPQVQNWLADHQPDVLVLQELKLDQDKFPAAALQMMGWHSVWSGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAI+S+ +P ++ LP D Q R I AT +R+ N+Y +G + S K Sbjct: 61 TYNGVAIISRSEPQDVHVGLPTLPDDPQRRVIAATVNG----VRVINVYCVNGEALDSPK 116 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K W F + E L+ GD+NI P DCY+P W + RQ F Sbjct: 117 FLYKEQWFAALTEFVRDEMTRYEKLVLLGDFNIAPADADCYDPEKWHEKIHCSSIERQWF 176 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + L ++G TD++R H Y+++DY + + G+RIDH ++SP +++L +D Sbjct: 177 KNLLDLGLTDSLRQIHPEGAFYTWFDYRGAMFQRKLGLRIDHQLISPALSAVLKDVYVDL 236 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 R +PSDH PV+ D+ Sbjct: 237 DARAQERPSDHAPVVAEFDL 256 >gi|146299724|ref|YP_001194315.1| exodeoxyribonuclease III Xth [Flavobacterium johnsoniae UW101] gi|146154142|gb|ABQ04996.1| exodeoxyribonuclease III Xth [Flavobacterium johnsoniae UW101] Length = 258 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 101/259 (38%), Positives = 147/259 (56%), Gaps = 3/259 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+NVN I R++ L W+ E PDI+CLQE K NFP + + Y+ GQK Sbjct: 1 MKIATYNVNGINGRLNVLLRWLDEAAPDIVCLQELKAPQDNFPLKAINDAGYNAVWHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVAIL++ IE +T + I LYLP+GNP+ K Sbjct: 61 QWNGVAILARNMKIEEITRTL---PGDDEDVQSRYIEALINGIVIACLYLPNGNPVPGPK 117 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 ++ K+ W R A+ L L+ P++ GDYN++P D Y P W NDA F E+R++F Sbjct: 118 FEYKLKWFDRLAERAAILLSLKVPVLLIGDYNVMPTELDVYKPEKWINDALFKPEIRKAF 177 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + + G+TDAIR + +Y+FWDY+ +++ +N G+RIDH +LSP+ S LHS +D Sbjct: 178 AAIVSQGWTDAIRTLYPDEKIYTFWDYFRNAYQRNAGLRIDHFLLSPQIASALHSGGVDR 237 Query: 244 KPRGWTKPSDHTPVIVSLD 262 RGW K SDH PV + +D Sbjct: 238 HVRGWEKTSDHAPVWIQID 256 >gi|119513165|ref|ZP_01632214.1| Exodeoxyribonuclease III xth [Nodularia spumigena CCY9414] gi|119462186|gb|EAW43174.1| Exodeoxyribonuclease III xth [Nodularia spumigena CCY9414] Length = 260 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 91/260 (35%), Positives = 134/260 (51%), Gaps = 2/260 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSIR R+ + W+ EN D++CLQETK D +FP + L YH+ GQK Sbjct: 1 MKIATWNVNSIRTRLEQVIFWLSENPIDVLCLQETKVVDADFPRSPFEELGYHVYFSGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT--LRIGNLYLPHGNPITS 121 +YNGVA++S+ ++ ++ + E I +RI NLY+P+G+ + S Sbjct: 61 AYNGVALISRQPLTDVSPGFTPILPNIDPLWDEQKRVITGVIDGIRIVNLYVPNGSAVGS 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 KY+ K+ W+ + L + + GD+NI D + +N + RQ Sbjct: 121 EKYEFKLRWLTVLREYLQTLLLSQPGICMCGDFNIALAAEDIHENANPDNHIMSSEPERQ 180 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 + + +GF DA R YS+WDY A + +N+G RIDH L+P S I Sbjct: 181 GLRDVLELGFADAFRKFTTEGGHYSWWDYRAAGFRRNRGWRIDHHYLTPTLYESAKSCII 240 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 D PR +PSDHTPVIV Sbjct: 241 DITPRKLPQPSDHTPVIVEF 260 >gi|270262158|ref|ZP_06190430.1| exodeoxyribonuclease III [Serratia odorifera 4Rx13] gi|270044034|gb|EFA17126.1| exodeoxyribonuclease III [Serratia odorifera 4Rx13] Length = 268 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 87/268 (32%), Positives = 133/268 (49%), Gaps = 8/268 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L+A I+++ PD+I LQETK D FP E + YH+ GQK Sbjct: 1 MKFVSFNINGLRARPHQLSAIIEQHQPDVIGLQETKVHDDMFPLEEVSQHGYHVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122 + GVA+L+K +PI + P DD D Q R I A TL + N Y P G Sbjct: 61 GHYGVALLTKDEPIAVRRGFPTDDDDAQRRIIMADLATPQGTLTVINGYFPQGESRDHPT 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC------YNPIIWENDACFT 176 K+ K + + + Q+L +E P++ GD NI P +D + F Sbjct: 121 KFPAKSRFYQDLQNYLEQQLSVESPVLVMGDVNISPSDYDIGIGEESRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +L N G D R + + +S++DY + + +N+G+RID ++ S + Sbjct: 181 PEEREWMDRLLNWGLVDTYRHANPGRNDEFSWFDYRSRGFDENRGLRIDLLLASTPLAAR 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + ID + RG KPSDH PV + Sbjct: 241 CTATGIDYQIRGMEKPSDHAPVWAEFSL 268 >gi|167570556|ref|ZP_02363430.1| exodeoxyribonuclease III [Burkholderia oklahomensis C6786] Length = 258 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 84/258 (32%), Positives = 133/258 (51%), Gaps = 1/258 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ R ++ W+ +++ D++CLQE K D+ FP L++ Y GQK Sbjct: 1 MRIATWNVNSLNVRKQHVLDWLAQSDVDVLCLQELKVPDEKFPRADLEAAGYRSWFTGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAIL++ T++ + + +RI + Y P+G S K Sbjct: 61 TYNGVAILARASLPFGETNVVRNIPGFEDAQQRLIAATIDG-VRIVSAYFPNGQAPDSDK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W+ + ++ L GDYNI P+ D ++P WE + + R F Sbjct: 120 FVYKMQWLDALQAWLKDEMQRYPKLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +L +GF DA R +++WDY ++ +N G+RIDHI+LSP S +D Sbjct: 180 AQLLALGFVDAFRRFDQPEKTFTWWDYRMLAFRRNAGLRIDHILLSPALADTCTSCTVDR 239 Query: 244 KPRGWTKPSDHTPVIVSL 261 PR W +PSDHTPV+ + Sbjct: 240 VPRTWEQPSDHTPVVAQI 257 >gi|253997905|ref|YP_003049968.1| exodeoxyribonuclease III Xth [Methylovorus sp. SIP3-4] gi|253984584|gb|ACT49441.1| exodeoxyribonuclease III Xth [Methylovorus sp. SIP3-4] Length = 255 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 89/258 (34%), Positives = 133/258 (51%), Gaps = 5/258 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ R+ ++ W N PD++CLQETK ED FP+E L ++ Y+ GQK Sbjct: 1 MKLATWNVNSLNVRLPHVLDWCTANQPDVLCLQETKQEDSKFPYEALTAIGYNAIHSGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAILS++ +P + + +RI Y+P+G + S K Sbjct: 61 TYNGVAILSRHVLEHPSYGIPDFADEQKRLIAATVKG-----IRIVCAYIPNGQSVDSDK 115 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K++W+ L L GDYNI P+ D ++P W + R +F Sbjct: 116 YQYKLNWLASLTTHLQAELAAHPKLALLGDYNIAPEDRDVHDPAAWLGQVLVSEPERTAF 175 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q L +G D R +S+WDY + +N G+RIDHI++S + ++ ID Sbjct: 176 QGLVGLGLHDTFRLFEQPEASFSWWDYRMAGFRRNLGLRIDHILVSTPLLAACKASWIDK 235 Query: 244 KPRGWTKPSDHTPVIVSL 261 PR +PSDHTPV++ L Sbjct: 236 APRKLERPSDHTPVVLEL 253 >gi|238763171|ref|ZP_04624137.1| Exodeoxyribonuclease III [Yersinia kristensenii ATCC 33638] gi|238698670|gb|EEP91421.1| Exodeoxyribonuclease III [Yersinia kristensenii ATCC 33638] Length = 271 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 84/271 (30%), Positives = 129/271 (47%), Gaps = 8/271 (2%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 M + ++N+N +RAR H LAA I+++ PD+I LQETK D FP E + YH+ Sbjct: 1 MLTMKFVSFNINGLRARPHQLAAIIEQHQPDVIGLQETKVHDDMFPLEEVSQHGYHVFYH 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 GQK + GVA+L+K +P+ + P D+ D Q R I A L + N Y P G Sbjct: 61 GQKGHYGVALLTKNEPLAVRRGFPTDEEDAQRRIIMADIATPQGPLTVINGYFPQGESRD 120 Query: 121 STK-YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC------YNPIIWENDA 173 + K + ++ Q+L + ++ GD NI P D + Sbjct: 121 HPIKFPAKERFYADLQQYLEQQLSSDAQVLIMGDVNISPTDMDIGIGEESRKRWLRTGKC 180 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 F E R ++LQN G D RA + + +S++DY + + +N+G+RID ++ S Sbjct: 181 SFLPEERAWLERLQNWGLVDTFRAANPDCNDQFSWFDYRSRGFDENRGLRIDLLLASHPL 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + + ID R KPSDH PV + Sbjct: 241 AARCIATGIDYDIRSMEKPSDHAPVWSEFAL 271 >gi|313499211|gb|ADR60577.1| Exodeoxyribonuclease III [Pseudomonas putida BIRD-1] Length = 265 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 103/262 (39%), Positives = 151/262 (57%), Gaps = 5/262 (1%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 M + +AT+N+N IR+R+ L AW++ PDI CLQE K D+ FP L++ Y Sbjct: 1 MKALKIATFNINGIRSRLPALLAWLEREQPDIACLQELKAADQQFPRAELEAAGYGSLHH 60 Query: 61 GQKSYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 GQ S+NGVAIL + P+E+ LPG + D Q+R++EA + + LYLP+GNP Sbjct: 61 GQPSWNGVAILVRGSDPLEVRRGLPGLEEDSQSRYLEAA----AHGVLVACLYLPNGNPQ 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K+D K+ W + ++ A E P + AGD+N++P D YNP W DA E Sbjct: 117 PGPKFDYKLHWFECLIQHARSLYESGHPTLLAGDFNVVPTDMDIYNPRSWLKDALLQPES 176 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R +Q+L + G+ DAIR + +Y+FWDY+ + W++N G+RIDH++L+ E L A Sbjct: 177 RACYQRLLDQGWLDAIRHLYPDERVYTFWDYFRNHWARNAGLRIDHLLLNHELAPYLKRA 236 Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261 +D R K SDH PV + L Sbjct: 237 GVDAWVRNEAKASDHAPVWIEL 258 >gi|313199970|ref|YP_004038628.1| exodeoxyribonuclease III xth [Methylovorus sp. MP688] gi|312439286|gb|ADQ83392.1| exodeoxyribonuclease III Xth [Methylovorus sp. MP688] Length = 255 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 89/258 (34%), Positives = 133/258 (51%), Gaps = 5/258 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ R+ ++ W N PD++CLQETK ED FP+E L ++ Y+ GQK Sbjct: 1 MKLATWNVNSLNVRLPHVLDWCTANQPDVLCLQETKQEDSKFPYEALTAIGYNAIHSGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAILS++ +P + + +RI Y+P+G + S K Sbjct: 61 TYNGVAILSRHVLEHPSYGIPDFADEQKRLIAATVKG-----IRIVCAYIPNGQSVDSDK 115 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K++W+ L L GDYNI P+ D ++P W + R +F Sbjct: 116 YQYKLNWLASLTTHLQAELAAHPKLALLGDYNIAPEDRDVHDPAAWLGQVLVSEPERNAF 175 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q L +G D R +S+WDY + +N G+RIDHI++S + ++ ID Sbjct: 176 QGLVGLGLHDTFRLFEQPEASFSWWDYRMAGFRRNLGLRIDHILVSTPLLAACKASWIDK 235 Query: 244 KPRGWTKPSDHTPVIVSL 261 PR +PSDHTPV++ L Sbjct: 236 APRKLERPSDHTPVVLEL 253 >gi|227326084|ref|ZP_03830108.1| exonuclease III [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 268 Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats. Identities = 90/268 (33%), Positives = 129/268 (48%), Gaps = 8/268 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V ++N+N +RAR H LAA I+++ PD+I LQETK D FP E + YH+ GQK Sbjct: 1 MKVVSFNINGLRARPHQLAAIIEQHQPDVIGLQETKVHDDMFPLEDVGQYGYHVYYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122 + GVA+L K QPI + P D+ D Q R I A F TL + N Y P G Sbjct: 61 GHYGVALLCKEQPIAVRRGFPTDEDDAQRRIIMADFATEHGTLTVVNGYFPQGESRDHPV 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + + + Q +PLI GD NI P + + F Sbjct: 121 KFPAKTRFYQDLQTYLEQHHSATQPLIVMGDVNISPTDLDIGIGEENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +LQ+ G D RA + + +S++DY + + N+G+RID I+ S Sbjct: 181 PEEREWMARLQDWGLIDTFRAANPDSNDRFSWFDYRSAGFDDNRGLRIDLILASTFLAER 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + ID RG KPSDH P+ + Sbjct: 241 CVATGIDYDIRGMEKPSDHAPIWAQFSL 268 >gi|169631267|ref|YP_001704916.1| exodeoxyribonuclease III protein XthA [Mycobacterium abscessus ATCC 19977] gi|169243234|emb|CAM64262.1| Probable exodeoxyribonuclease III protein XthA [Mycobacterium abscessus] Length = 266 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 79/266 (29%), Positives = 130/266 (48%), Gaps = 7/266 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSIRAR + +W++ + D++ +QETK DK FP + Y + G Sbjct: 1 MRLATWNVNSIRARADRVISWLERSGTDVLAMQETKCSDKQFPMQAFTDAGYEVAHVGFS 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-----TQTLRIGNLYLPHGNP 118 +NGVAI S+ ++ G + IE +R+ +LY+P+G Sbjct: 61 QWNGVAIASRVGLEDVTVGFEGQPGWSSSEDIEEASEARALGATCNGVRVWSLYVPNGRT 120 Query: 119 ITSTKYDDKISWIKRFLRFASQRLE--LEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + Y K+ W+ A+ L ++ + GD+NI P D ++ ++ + Sbjct: 121 LEDPHYQYKLRWLSALRDTAAGWLADAPDQQVALVGDWNIAPTDDDIWSVEAYQGSTHVS 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 R +F + + GF D +R +Y++WDY S+ K +G+RID ++ SPE + Sbjct: 181 EPERSAFTAMNDAGFADVVRPFTPGPGVYTYWDYTQLSFPKKRGMRIDFVLGSPEFAKRV 240 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLD 262 +A ID + R SDH PV+V LD Sbjct: 241 GNAHIDREERKGKGASDHAPVVVDLD 266 >gi|187920658|ref|YP_001889690.1| exodeoxyribonuclease III Xth [Burkholderia phytofirmans PsJN] gi|187719096|gb|ACD20319.1| exodeoxyribonuclease III Xth [Burkholderia phytofirmans PsJN] Length = 270 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 106/272 (38%), Positives = 155/272 (56%), Gaps = 5/272 (1%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 M+ + +AT+N+N IR+R+ L W++ PDI+CLQE K D FP E L+ Y Sbjct: 1 MARLRIATFNINGIRSRLPALLQWLEREAPDIVCLQELKAVDSAFPVEQLRDAGYGAIWQ 60 Query: 61 GQKSYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 GQ ++NGVAILSK P+E LPG + D +R+IEA + + LYLP+GNP Sbjct: 61 GQSAWNGVAILSKGEAPLESRRGLPGFEDDTHSRYIEAAVGG----VLVACLYLPNGNPQ 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K+D K++W F+ A++ + P++ AGD+N++P D YNP W DA E Sbjct: 117 PGPKFDYKLAWFDHFIEHAAKLYKSAHPVVLAGDFNVVPTDEDIYNPRSWLKDALLQPES 176 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R+ +Q+L G+TDA+R +Y+FWDY+ W N G+RIDH++LS + L A Sbjct: 177 RERYQRLLAQGWTDALRTHFGDERVYTFWDYFRRHWETNSGLRIDHLLLSADLAPRLRDA 236 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271 +D RG SDH P V L++ R+K+ Sbjct: 237 GVDRWVRGEPHASDHAPTWVELEMGATRRKKS 268 >gi|313667795|ref|YP_004048079.1| exodeoxyribonuclease III [Neisseria lactamica ST-640] gi|313005257|emb|CBN86690.1| exodeoxyribonuclease III [Neisseria lactamica 020-06] Length = 256 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 89/260 (34%), Positives = 133/260 (51%), Gaps = 4/260 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + TWNVNS+ R+ + + +N PD++ LQE K + FP LQ + +H GQK Sbjct: 1 MKITTWNVNSLNVRLPQVQNLLADNPPDVLVLQELKLDQDKFPAAALQMMGWHCVWSGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAI+S+ P ++ LP D Q R I AT +R+ N+Y +G + S K Sbjct: 61 TYNGVAIVSRSAPEDVYIGLPALPDDPQRRVIAATVGG----VRVINVYCVNGEALDSPK 116 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K W F + L+ GD+NI P DCY+P W + RQ F Sbjct: 117 FKYKEQWFAALTEFVRDEMTRYGKLVLLGDFNIAPADADCYDPEKWYEKIHCSSVERQWF 176 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + L ++G TD++R H Y+++DY + + G+RIDHI++SP L R+D Sbjct: 177 KNLLDLGLTDSLRQVHPEGAFYTWFDYRGAMFQRKLGLRIDHILVSPAMAEALKDVRVDL 236 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 R +PSDH PV D+ Sbjct: 237 DTRALERPSDHAPVTAEFDL 256 >gi|237800675|ref|ZP_04589136.1| exonuclease III [Pseudomonas syringae pv. oryzae str. 1_6] gi|331023534|gb|EGI03591.1| exonuclease III [Pseudomonas syringae pv. oryzae str. 1_6] Length = 270 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 89/269 (33%), Positives = 137/269 (50%), Gaps = 11/269 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +RAR H LAA I+++ PD+I LQETK D+ FP +++L YH+ GQK Sbjct: 1 MKIVSFNINGLRARPHQLAALIEKHQPDVIGLQETKVSDEQFPHADIEALGYHVHFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122 + GVA+LS+ P+++ GDD + Q RFI T+ N Q + I N Y P G Sbjct: 61 GHYGVALLSRNPPLDLHKGFEGDDEESQKRFIRGTYADSNGQPVTIMNGYFPQGESRDHP 120 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175 K+ K + + E+PLI GD NI P+ D + F Sbjct: 121 TKFPAKQRFYENLQSLLESHFSNEQPLIVMGDVNISPEDCDIGIGADNAKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232 E R+ ++L+N G D+ R + +S++DY + + +G+RID IM S Sbjct: 181 LPEEREWMERLKNWGLVDSFRYLNPEVSDRFSWFDYRSRGFEDEPKRGLRIDLIMTSTGL 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + +A +D RG KPSDH P+ + L Sbjct: 241 QPRIKAAGVDYDLRGMEKPSDHAPIWLEL 269 >gi|295835706|ref|ZP_06822639.1| exodeoxyribonuclease III [Streptomyces sp. SPB74] gi|295825643|gb|EDY45706.2| exodeoxyribonuclease III [Streptomyces sp. SPB74] Length = 262 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 79/263 (30%), Positives = 130/263 (49%), Gaps = 1/263 (0%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 M + +ATWNVNSI AR+ L AW++ + D++C+QETKT + FP E L+ Y Sbjct: 1 MVDMRIATWNVNSITARLPRLLAWLESSGTDVLCVQETKTTAEGFPTEALREAGYESAVN 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +NGVA++S+ ++V+ LPG A +R+ ++Y+P+G + Sbjct: 61 ATGRWNGVAVISRAGLDDVVSGLPGQPAYDGVMEPRALGATCGP-VRVWSVYVPNGREVG 119 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 Y K+ W++ + P GDYN+ P D Y+P ++E T R Sbjct: 120 HPHYAYKLEWLEALRTAVADDAAGARPFAVLGDYNVAPGDEDVYDPAVFEGLTHVTPPER 179 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 ++ KL+ G D + Y++WDY ++ KN+G+RID + + + A Sbjct: 180 EALAKLRATGLGDLVPRPLKYDRPYTYWDYRQLAFPKNRGMRIDLVYANAAFRTAAKGAY 239 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263 +D + R SDH PV+V L++ Sbjct: 240 VDREERKGKGASDHAPVVVDLEV 262 >gi|108797547|ref|YP_637744.1| exodeoxyribonuclease III [Mycobacterium sp. MCS] gi|119866633|ref|YP_936585.1| exodeoxyribonuclease III [Mycobacterium sp. KMS] gi|108767966|gb|ABG06688.1| Exodeoxyribonuclease III [Mycobacterium sp. MCS] gi|119692722|gb|ABL89795.1| Exodeoxyribonuclease III [Mycobacterium sp. KMS] Length = 267 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 81/265 (30%), Positives = 133/265 (50%), Gaps = 7/265 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSIRAR+ + W++ + D++ +QETK D+ FP +L Y + CG Sbjct: 1 MRLATWNVNSIRARVDRVTDWLERADVDVLAMQETKCNDEQFPTMPFAALGYDVVHCGFN 60 Query: 64 SYNGVAILSKYQPIEIVTHL-----PGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 +NGVAI S+ ++ GD D++A +R+ +LY+P+G Sbjct: 61 QWNGVAIASRVGLDDVAVGFDGQPTWGDKPDIEAAAEARALGATCAGVRVWSLYVPNGRF 120 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEE--PLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + S Y K+ W+ + A L P+ GD+NI P D ++ +++ T Sbjct: 121 VGSPHYAYKLEWLAALRKTAHGWLTENPALPIAMVGDWNIAPTDDDVWSVEAYQDSTHVT 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 RQ+F ++ + G+ D +R +Y++WDY ++ K +G+RID I+ SP + Sbjct: 181 PPERQAFTEIVDAGYADVVRPFTPGPGVYTYWDYTRLAFQKRRGMRIDFILGSPAFADRV 240 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSL 261 A I + R SDH PV+V L Sbjct: 241 THAEIVREERKGKGASDHAPVLVDL 265 >gi|126433169|ref|YP_001068860.1| exodeoxyribonuclease III [Mycobacterium sp. JLS] gi|126232969|gb|ABN96369.1| Exodeoxyribonuclease III [Mycobacterium sp. JLS] Length = 267 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 81/265 (30%), Positives = 131/265 (49%), Gaps = 7/265 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSIRAR+ + W++ + D++ +QETK D+ FP +L Y + CG Sbjct: 1 MRLATWNVNSIRARVDRVTDWLERADVDVLAMQETKCNDEQFPTMPFAALGYDVVHCGFN 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT-----LRIGNLYLPHGNP 118 +NGVAI S+ ++ G IEA +R+ +LY+P+G Sbjct: 61 QWNGVAIASRVGLDDVAVGFDGQPTWCDKPDIEAAAEARALGATCAGVRVWSLYVPNGRF 120 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEE--PLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + S Y K+ W+ + A L P+ GD+NI P D ++ +++ T Sbjct: 121 VGSPHYAYKLEWLAALRKTAHGWLTENPALPIAMVGDWNIAPTDDDVWSVEAYQDSTHVT 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 RQ+F ++ + G+ D +R +Y++WDY ++ K +G+RID I+ SP + Sbjct: 181 PPERQAFTEIVDAGYADVVRPFTPGPGVYTYWDYTRLAFQKRRGMRIDFILGSPAFADRV 240 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSL 261 A I + R SDH PV+V L Sbjct: 241 THAEIVREERKGKGASDHAPVLVDL 265 >gi|167563395|ref|ZP_02356311.1| exodeoxyribonuclease III [Burkholderia oklahomensis EO147] Length = 258 Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats. Identities = 84/258 (32%), Positives = 133/258 (51%), Gaps = 1/258 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ R ++ W+ +++ D++CLQE K D+ FP L++ Y GQK Sbjct: 1 MRIATWNVNSLNVRKQHVLDWLAQSDVDVLCLQELKVPDEKFPRADLEAAGYRSWFTGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAIL++ T++ + + +RI + Y P+G S K Sbjct: 61 TYNGVAILARASLPFDETNVVRNIPGFEDAQQRLIAATIDG-VRIVSAYFPNGQAPDSDK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W+ + ++ L GDYNI P+ D ++P WE + + R F Sbjct: 120 FVYKMQWLDALQAWLKDEMQRYPKLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +L +GF DA R +++WDY ++ +N G+RIDHI+LSP S +D Sbjct: 180 AQLLALGFVDAFRRFDQPEKTFTWWDYRMLAFRRNAGLRIDHILLSPALADTCTSCMVDR 239 Query: 244 KPRGWTKPSDHTPVIVSL 261 PR W +PSDHTPV+ + Sbjct: 240 VPRTWEQPSDHTPVVAQI 257 >gi|312885637|ref|ZP_07745272.1| exodeoxyribonuclease III [Mucilaginibacter paludis DSM 18603] gi|311301844|gb|EFQ78878.1| exodeoxyribonuclease III [Mucilaginibacter paludis DSM 18603] Length = 257 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 95/258 (36%), Positives = 141/258 (54%), Gaps = 3/258 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+NVN + R+ L W+ + PD++CLQE K + FP + + Y GQK Sbjct: 1 MKIATYNVNGVNGRLPVLLRWLNQTTPDVVCLQELKAPQEKFPEQAIADAGYQAIWHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 S+NGVAIL++ I + + IG LYLP+GNP K Sbjct: 61 SWNGVAILTRNLQI---KEIGRALPGDPEDMHSRYIEAVVNGIHIGCLYLPNGNPAPGPK 117 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 +D K+ W +R A+ L P++ GDYN++P D Y P W +DA F E R +F Sbjct: 118 FDYKLQWFERLKSHAASLLAAGTPVVLTGDYNVMPTELDVYKPERWLDDALFRPETRAAF 177 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + L + G+TDAIR + + +Y+FWDY+ D++ ++ G+RIDH +LSP+ L +A +D Sbjct: 178 KDLVDQGWTDAIRKLYPSQKIYTFWDYFRDAYGRDAGLRIDHFLLSPQLDGRLLAAGVDR 237 Query: 244 KPRGWTKPSDHTPVIVSL 261 RGW K SDH PV + L Sbjct: 238 NVRGWEKTSDHAPVWIEL 255 >gi|319782509|ref|YP_004141985.1| exodeoxyribonuclease III Xth [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168397|gb|ADV11935.1| exodeoxyribonuclease III Xth [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 256 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 90/259 (34%), Positives = 138/259 (53%), Gaps = 3/259 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A++N+N+I +R+ NL W+ PD++CLQE K D FP L + Y G+ Sbjct: 1 MKIASFNINNINSRLENLLTWLAVAKPDVVCLQELKARDMQFPRSALAAAGYGAVWKGEP 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 ++NGVAIL++ + +A + + LY P+GNP K Sbjct: 61 TWNGVAILARSAEPVLTRDAL---PGDEADRQSRYIEAAVNGIVVACLYAPNGNPQPGPK 117 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K++W R A Q L+ P++ AGDYNI+P+P D Y ++++A E R SF Sbjct: 118 FAYKLAWHARLEAHAEQLLDTGLPVVLAGDYNIVPEPRDIYATRSYDDNALVQPESRASF 177 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 ++L + G+ DA+R H LY+FWDY + W ++ G+R+DHI+LS + L +A ID Sbjct: 178 RRLLDQGWLDALRKKHPKETLYTFWDYRRNRWPRDAGLRLDHILLSKKLARRLTAAGIDR 237 Query: 244 KPRGWTKPSDHTPVIVSLD 262 RG SDH PV V L Sbjct: 238 DVRGEDGASDHAPVWVELK 256 >gi|145630665|ref|ZP_01786444.1| exodeoxyribonuclease III [Haemophilus influenzae R3021] gi|260582045|ref|ZP_05849840.1| exodeoxyribonuclease III [Haemophilus influenzae NT127] gi|144983791|gb|EDJ91241.1| exodeoxyribonuclease III [Haemophilus influenzae R3021] gi|260094935|gb|EEW78828.1| exodeoxyribonuclease III [Haemophilus influenzae NT127] Length = 267 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 82/267 (30%), Positives = 130/267 (48%), Gaps = 8/267 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A I++ PD+I LQE K D+ FP+E ++L YH+ GQK Sbjct: 1 MKFISFNINGLRARPHQLEAIIEKYQPDVIGLQEIKVADEAFPYEITENLGYHVFHHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122 + GVA+L+K +P + P D+ DVQ R I A L + N Y P G T Sbjct: 61 GHYGVALLTKQEPKAVRRGFPTDNEDVQKRIIMADLETEFGLLTVINGYFPQGESRAHET 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + ++ + + P++ GD NI P + + F Sbjct: 121 KFPAKEKFYADLQQYLEKEHDKSNPILIMGDMNISPSDLDIGIGDENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +Q+L + G D+ R + T + +S++DY + + N+G+RIDHI++S + Sbjct: 181 PEEREWYQRLYDYGLEDSFRKMNPTANDKFSWFDYRSKGFDDNRGLRIDHILVSQKLAER 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262 I R KPSDH P+ Sbjct: 241 CVDVGIALDIRAMEKPSDHAPIWAEFK 267 >gi|49082844|gb|AAT50822.1| PA2545 [synthetic construct] Length = 271 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 87/269 (32%), Positives = 129/269 (47%), Gaps = 11/269 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +RAR H LAA I+ + PD+I LQETK D FP +++L YH+ GQK Sbjct: 1 MKIVSFNINGLRARPHQLAALIERHQPDVIGLQETKVADDQFPQAEIEALGYHVHYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122 + GVA+LS+ P+E+ P D + Q RFI TF + + N Y P G Sbjct: 61 GHYGVALLSRQAPLELHRGFPSDGEESQRRFIWGTFSDAQGNPITVMNGYFPQGENREHP 120 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175 K+ K + + E+ L+ GD NI P D + F Sbjct: 121 TKFPAKQRFYADLQSLLENSFKPEQALVVMGDINISPGDCDIGIGEENRKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKN--KGIRIDHIMLSPEA 232 E R+ L+N G D+ RA + + +S++DY + + N +G+RID I+ S Sbjct: 181 LPEEREWLATLKNWGLVDSFRALNPEVNDRFSWFDYRSRGFEDNPKRGLRIDVILASRVL 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 A ID RG KPSDH P+ + L Sbjct: 241 QPRFKDAGIDYDLRGMEKPSDHAPIWLEL 269 >gi|187924588|ref|YP_001896230.1| exodeoxyribonuclease III Xth [Burkholderia phytofirmans PsJN] gi|187715782|gb|ACD17006.1| exodeoxyribonuclease III Xth [Burkholderia phytofirmans PsJN] Length = 258 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 83/258 (32%), Positives = 131/258 (50%), Gaps = 1/258 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS++ R ++ W++ + D++CLQE K D+ FP L+ Y GQK Sbjct: 1 MKIATWNVNSLKVRQQHVIDWLETSGTDVLCLQELKLPDEKFPRAELEEKGYRSWFAGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGV IL + + + ++ + + +RI + Y P+G + K Sbjct: 61 TYNGVGILVRGG-LTVDEGSIVRNIPGFEDPQQRVIAATIEGVRIISAYFPNGQAPGTDK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W+ + + + L L GDYNI P D ++P WE + E R +F Sbjct: 120 FAYKLRWLAALHDWIASEMALHPKLALLGDYNIAPDDRDVHDPKAWEGQNLVSPEERAAF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +L +G DA R +YS+WDY ++ +N G+RIDHI+LS + S +D Sbjct: 180 VRLIELGLLDAFRQFEQPEKIYSWWDYRMMAFRRNAGLRIDHILLSKALADVCSSCDVDK 239 Query: 244 KPRGWTKPSDHTPVIVSL 261 PR W +PSDH PV+ L Sbjct: 240 VPRKWDQPSDHAPVVAQL 257 >gi|103487661|ref|YP_617222.1| exodeoxyribonuclease III (xth) [Sphingopyxis alaskensis RB2256] gi|98977738|gb|ABF53889.1| Exodeoxyribonuclease III [Sphingopyxis alaskensis RB2256] Length = 256 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 101/259 (38%), Positives = 152/259 (58%), Gaps = 5/259 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+N+N I+AR+ L W++E PD+ CLQE K+ D+ P + +++ Y GQK Sbjct: 1 MKIATFNINGIKARLPRLIEWLEERQPDVACLQELKSSDETMPTKEIEAAGYGFLYHGQK 60 Query: 64 SYNGVAILSKY-QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 +NGVAIL+K P+E+ L G+ D Q+R++EA +R+ ++YLP+GNP Sbjct: 61 GFNGVAILAKGADPVEVQRGLAGEAEDEQSRYLEAD----AHGIRVASIYLPNGNPQPGP 116 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K+D K+ W+ R A L E P + AGDYN+IP D ++P DA E R + Sbjct: 117 KFDYKLRWMARLRERARMLLAAEIPTVLAGDYNVIPHDDDVWDPRAMATDALMQPESRDA 176 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 + +L G+TDA+R+ H H++++WDY A +W ++ G RIDH++LSP L A +D Sbjct: 177 WFRLLGDGWTDALRSRHPAGHVWTYWDYQAGAWQRDHGFRIDHLLLSPALADRLVDAGVD 236 Query: 243 TKPRGWTKPSDHTPVIVSL 261 RG K SDH P V L Sbjct: 237 KDHRGREKASDHAPTWVVL 255 >gi|329847835|ref|ZP_08262863.1| exodeoxyribonuclease III [Asticcacaulis biprosthecum C19] gi|328842898|gb|EGF92467.1| exodeoxyribonuclease III [Asticcacaulis biprosthecum C19] Length = 258 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 109/261 (41%), Positives = 156/261 (59%), Gaps = 5/261 (1%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +AT+NVN + R+ L W+ E PD++CLQE K D+ FP + L++ Y GQ Sbjct: 1 MTKIATFNVNGVNGRLPVLLRWLAEARPDVVCLQELKAPDEKFPVKALEAAGYGAIWHGQ 60 Query: 63 KSYNGVAILSKY-QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 KS+NGVAIL+ +P+E LPGD D +R+IEA + IG LYLP+GNP Sbjct: 61 KSWNGVAILAHGAEPVETRRGLPGDPDDTHSRYIEAAVNG----VLIGGLYLPNGNPWPG 116 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 K++ K+ W +R A++ L P++ AGDYN++P D Y P W++DA F +EVR+ Sbjct: 117 KKFEYKLRWFERLKAHAAELLTTGAPVVLAGDYNVMPTDIDVYAPDRWQDDALFRIEVRE 176 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 ++ L G+TDA+R H +++FWDY W +N G+RIDH++LSP L A + Sbjct: 177 AYAALMAQGWTDALRELHPGEQIFTFWDYLRARWPRNAGLRIDHLLLSPSMAPRLRQAEV 236 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 D RGW K SDH PV + LD Sbjct: 237 DRHVRGWEKASDHAPVWIVLD 257 >gi|94495762|ref|ZP_01302342.1| exodeoxyribonuclease III [Sphingomonas sp. SKA58] gi|94425150|gb|EAT10171.1| exodeoxyribonuclease III [Sphingomonas sp. SKA58] Length = 262 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 103/259 (39%), Positives = 156/259 (60%), Gaps = 5/259 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+N+N I+AR+ L W+ E PD+ CLQE KT D+ FP + ++ Y GQK Sbjct: 5 MRIATFNINGIKARLPRLLEWLDETRPDVACLQEIKTSDETFPIKDIEDAGYGAIWHGQK 64 Query: 64 SYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 +NGVAIL++ P+E+ L G+ D +R++EA +R+ ++YLP+GNP Sbjct: 65 GFNGVAILARGDAPVEVRRGLEGEPEDEHSRYLEADVKG----VRVASIYLPNGNPQPGP 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K+D K+ W+ R R A++ E P + AGDYN+IP+ D ++ +DA E R + Sbjct: 121 KFDYKLRWMDRLRRRAAEIWTEEVPAVLAGDYNVIPRDVDTFSVKAMADDALMQPESRAA 180 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 ++++ N G+TDAI + H +++FWDY A+SW ++ G RIDH++LSP A L AR+D Sbjct: 181 YRRMLNDGWTDAILSRHPAGGVWTFWDYQANSWPRDAGFRIDHLLLSPAAADRLIDARVD 240 Query: 243 TKPRGWTKPSDHTPVIVSL 261 RG K SDH P V L Sbjct: 241 RDFRGREKASDHAPTWVEL 259 >gi|294635923|ref|ZP_06714368.1| exodeoxyribonuclease III [Edwardsiella tarda ATCC 23685] gi|291090755|gb|EFE23316.1| exodeoxyribonuclease III [Edwardsiella tarda ATCC 23685] Length = 269 Score = 207 bits (526), Expect = 2e-51, Method: Composition-based stats. Identities = 82/269 (30%), Positives = 124/269 (46%), Gaps = 8/269 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H LAA ++++NPD+I LQETK D FP + L L YH+ GQK Sbjct: 1 MKFISFNINGLRARPHQLAAIVEKHNPDVIGLQETKVHDDMFPLQDLAPLGYHLHYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122 + GVA+L++ P+ + PGD D Q R I A L + N Y P G Sbjct: 61 GHYGVALLTRMAPLAVRKGFPGDAEDAQRRIIMADIPTEQGVLTVINGYFPQGESRDHPL 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC------YNPIIWENDACFT 176 K+ K + + Q L ++ ++ GD NI P D + F Sbjct: 121 KFPAKSKFYADLQDYLQQSLTPQDQVLIMGDMNISPADIDIGIGDESRRRWLRSGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R +L + G D R H +S++DY + + N+G+RID ++ S Sbjct: 181 PEERAWMDRLLSWGLVDTYRQAHPERDDRFSWFDYRSKGFDDNRGLRIDLLLASQPLAQR 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 + ID + R KPSDH P+ + Sbjct: 241 CVDSGIDYEIRAMEKPSDHAPIWAEFTLS 269 >gi|254777166|ref|ZP_05218682.1| exodeoxyribonuclease III [Mycobacterium avium subsp. avium ATCC 25291] Length = 272 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 79/271 (29%), Positives = 126/271 (46%), Gaps = 7/271 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSIR+R+ + W+ + D++ +QETK D FP L Y + G Sbjct: 1 MRLATWNVNSIRSRLPRVLDWLARTDVDVLAMQETKCADGQFPTLPFFELGYEVAHVGFN 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQAR-----FIEATFTINTQTLRIGNLYLPHGNP 118 +NGVAI S+ ++ G +RI +LY+P+G Sbjct: 61 QWNGVAIASRVGLDDVRVGFEGQPSWSGKPEVAAAAEARALAATCAGVRIWSLYVPNGRA 120 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEE--PLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + Y K+ W+ A+ L + + AGD+NI PQ D ++ I+ + Sbjct: 121 VGDPHYAYKLDWLAALRDSAAGWLREDPAAQIALAGDWNIAPQDDDVWSMEIFAGATHVS 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 R++F + + F D +R +Y++WDY A + K +G+RID I+ SP + Sbjct: 181 EPERRAFNAILDAQFADLVRPFAPGPGVYTYWDYTALRFPKRQGMRIDFILGSPALARRV 240 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDIPEPR 267 A+ID + R SDH PV+V + EP Sbjct: 241 THAQIDREERKGKGASDHAPVLVDVSRDEPP 271 >gi|297203458|ref|ZP_06920855.1| exodeoxyribonuclease III [Streptomyces sviceus ATCC 29083] gi|197716336|gb|EDY60370.1| exodeoxyribonuclease III [Streptomyces sviceus ATCC 29083] Length = 259 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 78/260 (30%), Positives = 123/260 (47%), Gaps = 1/260 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSI AR+ L AW++ D++CLQE K + FPF+ L+ Y Sbjct: 1 MRIATWNVNSITARLPRLLAWLESTGTDVLCLQEAKVAEAQFPFDQLREAGYEAAVHATG 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVA++S+ ++V LPGD A A R+ ++Y+P+G + Sbjct: 61 RWNGVAVISRVGLDDVVKGLPGDPGYDGAPEPRAISATCGPA-RVWSVYVPNGREVDHPH 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W + + P GDYN+ P D Y+ +E T R + Sbjct: 120 YAYKLQWFEALKAAVAGDAAGSRPFAVLGDYNVAPTDDDVYDVAAFEGLTHVTPAERAAL 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 L+ G +D + H +++WDY + KN+G+RID + + + A +D Sbjct: 180 ASLREAGLSDVVPRPLKYDHPFTYWDYRQLCFPKNRGMRIDLVYGNESFAKAVTDAYVDR 239 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 + R SDH PV+V LD+ Sbjct: 240 EERKGKGASDHAPVVVDLDV 259 >gi|319774993|ref|YP_004137481.1| exodeoxyribonuclease III [Haemophilus influenzae F3047] gi|329123105|ref|ZP_08251675.1| exodeoxyribonuclease III [Haemophilus aegyptius ATCC 11116] gi|317449584|emb|CBY85789.1| exodeoxyribonuclease III [Haemophilus influenzae F3047] gi|327471660|gb|EGF17102.1| exodeoxyribonuclease III [Haemophilus aegyptius ATCC 11116] Length = 267 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 82/267 (30%), Positives = 129/267 (48%), Gaps = 8/267 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A I++ PD+I LQE K D+ FP+E ++L YH+ GQK Sbjct: 1 MKFISFNINGLRARPHQLEAIIEKYQPDVIGLQEIKVADEAFPYEITENLGYHVFHHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122 + GVA+L+K +P + P D+ D Q R I A L + N Y P G T T Sbjct: 61 GHYGVALLTKQEPKVVRRGFPTDNEDAQKRIIMADLETEFGLLTVINGYFPQGESRTHET 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + ++ + + P++ GD NI P + + F Sbjct: 121 KFPAKEKFYADLQQYLEKEHDKSNPILIMGDMNISPSDLDIGIGDENRKRWLSTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R +Q+L + G D+ R + T + +S++DY + + N+G+RIDHI++S + Sbjct: 181 PEERAWYQRLYDYGLEDSFRKLNPTANDKFSWFDYRSKGFDDNRGLRIDHILVSQKLAER 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262 I R KPSDH P+ Sbjct: 241 CVDVGIALDIRAMEKPSDHAPIWAEFK 267 >gi|121593606|ref|YP_985502.1| exodeoxyribonuclease III Xth [Acidovorax sp. JS42] gi|120605686|gb|ABM41426.1| exodeoxyribonuclease III Xth [Acidovorax sp. JS42] Length = 258 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 93/258 (36%), Positives = 141/258 (54%), Gaps = 1/258 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+NS+ R+ + AW++ N D I LQE K D+ FP + ++ YH GQK Sbjct: 1 MQIATWNINSLSVRLPQVLAWLEANPVDAIGLQELKLVDEKFPHDAFEAAGYHAVCFGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAILS+ ++V ++PG + AT LR+ N Y +G + K Sbjct: 61 TYNGVAILSRTPLRDVVRNIPGHGDEQARVI-AATLDTPEGPLRLVNCYFVNGQAPGTEK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W++ + L L+ GD+N+ P+ D ++P+ ++ T+E RQ F Sbjct: 120 FSYKLLWLEALRDWLRTELAAHPRLVLVGDFNVAPEDRDSFDPVGLKDTIHHTVEERQHF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q L +G TDA R YS+WDY + KN+G+RIDHI++S + + RID Sbjct: 180 QDLLGLGLTDAFRLFDQPEKSYSWWDYRMLGFQKNRGLRIDHILVSAALRPSVTACRIDR 239 Query: 244 KPRGWTKPSDHTPVIVSL 261 PR +PSDH PV+VSL Sbjct: 240 APRKNPQPSDHAPVVVSL 257 >gi|83645532|ref|YP_433967.1| exonuclease III [Hahella chejuensis KCTC 2396] gi|83633575|gb|ABC29542.1| exodeoxyribonuclease III [Hahella chejuensis KCTC 2396] Length = 270 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 74/269 (27%), Positives = 117/269 (43%), Gaps = 9/269 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++NVN +R+R+H L I + PDII LQETK D+ FP E + + Y E GQK Sbjct: 1 MRIVSFNVNGVRSRLHQLKELISQYQPDIIGLQETKVIDELFPLEAINEMGYQAEYYGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 + GVA+LSK + GD + R+I + + QTL + N Y P G + Sbjct: 61 GHYGVALLSKQPALRCFKGFEGDGEEAHKRWIVGEYAVGGQTLVVCNGYFPQGENRSHPD 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACFTL 177 Q+ ++P++ GD N+ D + F Sbjct: 121 KFPNKQRFYAGTLDFLQQRSPDQPIVVMGDMNVSHTDSDIGIGEENRKRWLRTGKCSFLP 180 Query: 178 EVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKN--KGIRIDHIMLSPEATS 234 E R+ +L + G D R YS++DY + + N +G+RID I+ + + Sbjct: 181 EEREWLNRLLDWGLVDTFRQHFPDVKDRYSWFDYRSRGFEDNPKRGLRIDLILATQPLAA 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 A + + R K SDH P+ D+ Sbjct: 241 RCVDAGVSYEIRSMEKASDHCPIWADFDL 269 >gi|104781211|ref|YP_607709.1| exonuclease III [Pseudomonas entomophila L48] gi|95110198|emb|CAK14905.1| exonuclease III [Pseudomonas entomophila L48] Length = 270 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 84/269 (31%), Positives = 134/269 (49%), Gaps = 11/269 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +RAR H LAA I ++ PD+I LQETK D FP + +++L YH+ GQK Sbjct: 1 MKIVSFNINGLRARPHQLAALIDKHQPDVIGLQETKVSDDQFPLKDVEALGYHVHYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122 + GVA+LS+ +P+ + D+ D Q RFI TF + + + N Y P G Sbjct: 61 GHYGVALLSREKPLSLHKGFASDEEDAQRRFIWGTFADRDGTPVTVMNGYFPQGESRDHP 120 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175 K+ K + + + +P++ GD NI PQ D + F Sbjct: 121 TKFPAKQRFYSDLQALLEGQFQNGQPVLVMGDMNISPQDCDIGIGADNAKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232 E R+ ++L+ G D+ R + +S++DY + + +G+RID IM S Sbjct: 181 LPEEREWMERLKGWGLVDSFRHLNPEVADRFSWFDYRSRGFEDEPKRGLRIDLIMASQGL 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 L +A +D + RG KPSDH P+ + L Sbjct: 241 LPRLKAAGVDYELRGMEKPSDHAPIWLEL 269 >gi|184199810|ref|YP_001854017.1| exodeoxyribonuclease III [Kocuria rhizophila DC2201] gi|183580040|dbj|BAG28511.1| exodeoxyribonuclease III [Kocuria rhizophila DC2201] Length = 268 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 74/268 (27%), Positives = 128/268 (47%), Gaps = 9/268 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSIRAR + AW+ ++ D++ +QETK +D+NFP+E + Y + G Sbjct: 1 MRIATWNVNSIRARADRIEAWLDRSDVDVLAIQETKAKDENFPWELFEFAGYEVAHFGVN 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDD----LDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +NGVAI S+ ++ P + +R+ +LY+P+G + Sbjct: 61 QWNGVAIASRVGLTDVQRTFPDQPTFGKPGQEPAQEARAIGATCGGVRVWSLYVPNGRGL 120 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIF--AGDYNIIPQPHDCYNPIIWENDACFT- 176 K+ W++ A Q L+ + GD+N+ PQ D ++ +++ Sbjct: 121 DDPHMPYKLEWLRVLEGHAKQWLQEDPDAQIALVGDWNVAPQDDDVWDIQLFKEGGYTHV 180 Query: 177 --LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E +++ G+ D +R H +Y++WDY + K +G+RID + SP + Sbjct: 181 SEPERAAFHAFIEDAGYQDVVRPRHPGPGVYTYWDYKQLRFPKKEGMRIDFQLCSPALAA 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + A ID R SDH PV++ +D Sbjct: 241 RVQDAWIDRDERKGKGASDHAPVVIEID 268 >gi|50121263|ref|YP_050430.1| exonuclease III [Pectobacterium atrosepticum SCRI1043] gi|49611789|emb|CAG75238.1| exodeoxyribonuclease III [Pectobacterium atrosepticum SCRI1043] Length = 268 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 88/268 (32%), Positives = 128/268 (47%), Gaps = 8/268 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V ++N+N +RAR H LAA I+++ PD+I LQETK D FP E + YH+ GQK Sbjct: 1 MKVVSFNINGLRARPHQLAAIIEQHQPDVIGLQETKVHDDMFPLEDVSKYGYHVYYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122 + GVA+L K +P+E+ P D+ D Q R I A F TL + N Y P G Sbjct: 61 GHYGVALLCKEKPLEVRLGFPTDEEDAQRRIIMADFATEHGTLTVVNGYFPQGENRDHPV 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + + + Q +PLI GD NI + + F Sbjct: 121 KFPAKTRFYQDLQTYLEQHHSATQPLIVMGDVNISATDLDIGIGEESRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +LQ G D RA + + +S++DY + + N+G+RID I+ S Sbjct: 181 PEEREWMARLQGWGLIDTFRAANPEGNDRFSWFDYRSSGFDDNRGLRIDLILASTFLAER 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + ID RG KPSDH P+ + Sbjct: 241 CVATGIDYDIRGMEKPSDHAPIWAEFTL 268 >gi|319896463|ref|YP_004134656.1| exodeoxyribonuclease iii [Haemophilus influenzae F3031] gi|317431965|emb|CBY80313.1| exodeoxyribonuclease III [Haemophilus influenzae F3031] Length = 267 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 80/267 (29%), Positives = 127/267 (47%), Gaps = 8/267 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A I++ PD+I LQE K D+ FP+E ++L YH+ GQK Sbjct: 1 MKFISFNINGLRARPHQLEAIIEKYQPDVIGLQEIKVADEAFPYEITENLGYHVFHHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122 + GVA+L+K +P + P D+ Q R I A L + N Y P G T Sbjct: 61 GHYGVALLTKQEPKVVRRGFPTDNEGAQKRIIMADLETEFGLLTVINGYFPQGESRAHET 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + ++ + + P++ GD NI P + + F Sbjct: 121 KFPAKEKFYADLQQYLEKEHDKSNPILIMGDMNISPSDLDIGIGDENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R +Q+L + G D+ R + T + +S++DY + + N+G+RIDHI++S + Sbjct: 181 PEERAWYQRLYDYGLEDSFRKLNPTANDKFSWFDYRSKGFDDNRGLRIDHILVSRKLAER 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262 I R KPSDH P+ Sbjct: 241 CVDVGIALDIRAMEKPSDHAPIWAEFK 267 >gi|145629100|ref|ZP_01784899.1| exodeoxyribonuclease III [Haemophilus influenzae 22.1-21] gi|145639670|ref|ZP_01795273.1| exodeoxyribonuclease III [Haemophilus influenzae PittII] gi|144978603|gb|EDJ88326.1| exodeoxyribonuclease III [Haemophilus influenzae 22.1-21] gi|145271227|gb|EDK11141.1| exodeoxyribonuclease III [Haemophilus influenzae PittII] gi|309750640|gb|ADO80624.1| Exodeoxyribonuclease III [Haemophilus influenzae R2866] Length = 267 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 81/267 (30%), Positives = 128/267 (47%), Gaps = 8/267 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A I++ PD+I LQE K D+ FP+E ++L YH+ GQK Sbjct: 1 MKFISFNINGLRARPHQLEAIIEKYQPDVIGLQEIKVADEAFPYEITENLGYHVFHHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122 + GVA+L+K +P + P D+ D Q R I A L + N Y P G T Sbjct: 61 GHYGVALLTKQKPKVVRRGFPTDNEDAQKRIIMADLETEFGLLTVINGYFPQGESRAHET 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + ++ + + P++ GD NI P + + F Sbjct: 121 KFPAKEKFYADLQQYLEKEHDKSNPILIMGDMNISPSDLDIGIGDENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R +Q+L + G D+ R + T + +S++DY + + N+G+RIDHI++S + Sbjct: 181 PEERAWYQRLYDYGLEDSFRKLNPTANDKFSWFDYRSKGFDDNRGLRIDHILVSQKLAER 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262 I R KPSDH P+ Sbjct: 241 CVDVGIALDIRAMEKPSDHAPIWAEFK 267 >gi|330875089|gb|EGH09238.1| exonuclease III [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 270 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 89/269 (33%), Positives = 135/269 (50%), Gaps = 11/269 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +RAR H LAA I ++ PD+I LQETK D+ FP +++L YH+ GQK Sbjct: 1 MKIVSFNINGLRARPHQLAALIDKHQPDVIGLQETKVSDEQFPLADVEALGYHVHFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122 + GVA+LS+ P+ + GDD + Q RFI T+ N Q + I N Y P G Sbjct: 61 GHYGVALLSRNPPLALHKGFEGDDEESQKRFIRGTYADSNGQPVTIMNGYFPQGESRDHP 120 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175 K+ K + + ++PLI GD NI PQ D + F Sbjct: 121 TKFPAKQRFYENLQALLEGHFSNDQPLIVMGDVNISPQDCDIGIGADNAKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232 E R+ ++L+N G D+ R + +S++DY + + +G+RID IM S Sbjct: 181 LPEEREWMERLKNWGLVDSFRYLYPEVSDRFSWFDYRSRGFEDEPKRGLRIDLIMTSTGL 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + +A +D RG KPSDH P+ + L Sbjct: 241 QPRIKAAGVDYDLRGMEKPSDHAPIWLEL 269 >gi|319791365|ref|YP_004153005.1| exodeoxyribonuclease iii xth [Variovorax paradoxus EPS] gi|315593828|gb|ADU34894.1| exodeoxyribonuclease III Xth [Variovorax paradoxus EPS] Length = 263 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 107/265 (40%), Positives = 159/265 (60%), Gaps = 5/265 (1%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 M ++ +AT+NVN I +R+ L W+ E+ PD+ CLQE K+ D P + ++ Y I Sbjct: 1 MPLMKIATFNVNGINSRLARLLEWLDESKPDVACLQELKSPDAALPVDAIRGAGYGIVAH 60 Query: 61 GQKSYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 GQ+++NGVAIL++ +PI+ LPG + D Q+R+IEA + +G LYLP+GNP Sbjct: 61 GQRAWNGVAILARGREPIDTGRGLPGMEADTQSRYIEAVVGG----VLVGCLYLPNGNPQ 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K+D K+ W + F R A + P++ AGDYN++P D YNP W +DA E Sbjct: 117 PGPKFDYKLQWFEAFNRHAKKLFSSGMPVVLAGDYNVVPTDADIYNPASWRDDALLQPES 176 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R +F +L G+TDAIRATH ++FW Y+ + + ++ G+RIDH++L+ E +L SA Sbjct: 177 RAAFAQLLKQGWTDAIRATHPDRVPFTFWTYWRNRYPRDAGLRIDHLLLNAELAPMLRSA 236 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIP 264 +D RG T SDH P + LDI Sbjct: 237 GVDRDVRGRTGASDHAPAWIELDIS 261 >gi|158338364|ref|YP_001519541.1| exodeoxyribonuclease III [Acaryochloris marina MBIC11017] gi|158308605|gb|ABW30222.1| exodeoxyribonuclease III [Acaryochloris marina MBIC11017] Length = 268 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 88/264 (33%), Positives = 139/264 (52%), Gaps = 5/264 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A+WNVNSIR R+ ++ W+ + D++CLQETK D++FP + + Y + GQK Sbjct: 1 MKIASWNVNSIRTRLEHVLDWLYTQSIDVLCLQETKVIDEDFPKASFEEEGYQVYVSGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL----RIGNLYLPHGNPI 119 +YNGVA++S+ E+ + + + + T + RI NLY+P+G+ I Sbjct: 61 AYNGVALISRTTLSEVSSGFTPLLGPDLTQHYDQQKRLITGIISPGVRILNLYVPNGSEI 120 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLI-FAGDYNIIPQPHDCYNPIIWENDACFTLE 178 S KY K+ W++ + + L + + GD+NI D ++P E T Sbjct: 121 DSDKYVYKLEWLELLHHYVEKLLSQDPQHLLICGDFNIALDDRDMHDPSKREAHIMSTDR 180 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 RQ+ QK+ +G D R + +S+W+Y A S+ +NKG RIDH L+P + Sbjct: 181 ERQALQKVLALGLEDVFRKFNSKSEQFSWWNYRAGSFQRNKGWRIDHHYLTPTLYEQATA 240 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 ID PR KPSDH PV+V +D Sbjct: 241 CTIDAAPRRLPKPSDHAPVVVEID 264 >gi|148825679|ref|YP_001290432.1| exonuclease III [Haemophilus influenzae PittEE] gi|148715839|gb|ABQ98049.1| exodeoxyribonuclease III [Haemophilus influenzae PittEE] Length = 267 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 81/267 (30%), Positives = 128/267 (47%), Gaps = 8/267 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A I++ PD+I LQE K D+ FP+E ++L YH+ GQK Sbjct: 1 MKFISFNINGLRARPHQLEAIIEKYQPDVIGLQEIKVADEAFPYEITENLGYHVFHHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122 + GVA+L+K +P + D+ D Q R I A L + N Y P G T T Sbjct: 61 GHYGVALLTKQEPKAVRRGFSTDNEDAQKRIIMADLETEFGLLTVINGYFPQGESRTHET 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + ++ + + P++ GD NI P + + F Sbjct: 121 KFPAKEKFYADLQQYLEKEHDKSNPILIMGDMNISPSDLDIGIGDENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R +Q+L + G D+ R + T + +S++DY + + N+G+RIDHI++S + Sbjct: 181 PEERAWYQRLYDYGLEDSFRKLNPTANDKFSWFDYRSKGFDDNRGLRIDHILVSQKLAER 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262 I R KPSDH P+ Sbjct: 241 CVDVGIALDIRAMEKPSDHAPIWAEFK 267 >gi|227111460|ref|ZP_03825116.1| exonuclease III [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 268 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 90/268 (33%), Positives = 128/268 (47%), Gaps = 8/268 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V ++N+N +RAR H LAA I+++ PD+I LQETK D FP E + YH+ GQK Sbjct: 1 MKVVSFNINGLRARPHQLAAIIEQHQPDVIGLQETKVHDDMFPLEDVSQYGYHVYYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122 + GVA+L K QPI + P D+ D Q R I A F TL + N Y P G Sbjct: 61 GHYGVALLCKTQPIAVRRGFPTDEDDAQRRIIMADFATEHGTLTVVNGYFPQGESRDHPV 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + + + Q +PLI GD NI P + + F Sbjct: 121 KFPAKTRFYQDLQTYLEQHHSATQPLIVMGDVNISPTDLDIGIGEENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +LQ G D RA + + +S++DY + + N+G+RID I+ S Sbjct: 181 PEEREWMARLQRWGLIDTFRAANPDSNDRFSWFDYRSAGFDDNRGLRIDLILASTFLAER 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + ID RG KPSDH P+ + Sbjct: 241 CVATGIDYDIRGMEKPSDHAPIWAQFSL 268 >gi|145633402|ref|ZP_01789132.1| exodeoxyribonuclease III [Haemophilus influenzae 3655] gi|145635225|ref|ZP_01790929.1| exodeoxyribonuclease III [Haemophilus influenzae PittAA] gi|229845387|ref|ZP_04465518.1| exonuclease III [Haemophilus influenzae 6P18H1] gi|229846960|ref|ZP_04467066.1| exonuclease III [Haemophilus influenzae 7P49H1] gi|144985965|gb|EDJ92567.1| exodeoxyribonuclease III [Haemophilus influenzae 3655] gi|145267504|gb|EDK07504.1| exodeoxyribonuclease III [Haemophilus influenzae PittAA] gi|229810044|gb|EEP45764.1| exonuclease III [Haemophilus influenzae 7P49H1] gi|229811695|gb|EEP47393.1| exonuclease III [Haemophilus influenzae 6P18H1] gi|309972825|gb|ADO96026.1| Exodeoxyribonuclease III [Haemophilus influenzae R2846] Length = 267 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 81/267 (30%), Positives = 128/267 (47%), Gaps = 8/267 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A I++ PD+I LQE K D+ FP+E ++L YH+ GQK Sbjct: 1 MKFISFNINGLRARPHQLEAIIEKYQPDVIGLQEIKVADEAFPYEITENLGYHVFHHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122 + GVA+L+K +P + P D+ D Q R I A L + N Y P G T Sbjct: 61 GHYGVALLTKQEPKVVRRGFPTDNEDAQKRIIMADLETEFGLLTVINGYFPQGESRAHET 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + ++ + + P++ GD NI P + + F Sbjct: 121 KFPAKEKFYADLQQYLEKEHDKSNPILIMGDMNISPSDLDIGIGDENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R +Q+L + G D+ R + T + +S++DY + + N+G+RIDHI++S + Sbjct: 181 PEERAWYQRLYDYGLEDSFRKLNPTANDKFSWFDYRSKGFDDNRGLRIDHILVSQKLAER 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262 I R KPSDH P+ Sbjct: 241 CVDVGIALDIRAMEKPSDHAPIWAEFK 267 >gi|254251949|ref|ZP_04945267.1| Exonuclease III [Burkholderia dolosa AUO158] gi|124894558|gb|EAY68438.1| Exonuclease III [Burkholderia dolosa AUO158] Length = 281 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 82/257 (31%), Positives = 137/257 (53%), Gaps = 1/257 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ R ++ W+ ++ D++CLQE K D+ +P L+++ Y GQK Sbjct: 24 MKIATWNVNSLNVRKQHVLDWLAQSGADVLCLQELKLPDEKYPRADLEAVGYRSWFTGQK 83 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAIL++ + + ++ + + + +RI + Y P+G + S K Sbjct: 84 TYNGVAILARNT-LTVDESDVVRNIPGFDDPQQRVVAVTVEGVRIVSAYFPNGQAVDSDK 142 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W+ + + ++ L GD+NI P+ D ++P WE + + R F Sbjct: 143 FVYKMQWLDALHAWLAAEMQRYPKLALLGDFNIAPEDRDVHDPAKWEGQNLVSPQERAHF 202 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 KL +GF DA R +++WDY ++ +N G+RIDHI+LSP S +D Sbjct: 203 AKLIELGFVDAFRRFEQPEKTFTWWDYRMFAFRRNAGLRIDHILLSPALADTCTSCVVDR 262 Query: 244 KPRGWTKPSDHTPVIVS 260 PR W +PSDHTPV+ + Sbjct: 263 APRTWEQPSDHTPVVAT 279 >gi|330965345|gb|EGH65605.1| exonuclease III [Pseudomonas syringae pv. actinidiae str. M302091] Length = 270 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 89/269 (33%), Positives = 135/269 (50%), Gaps = 11/269 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +RAR H LAA I ++ PD+I LQETK D+ FP +++L YH+ GQK Sbjct: 1 MKIVSFNINGLRARPHQLAALIDKHQPDVIGLQETKVSDEQFPLADVEALGYHVHFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122 + GVA+LS+ P+ + GDD + Q RFI T+ N Q + I N Y P G Sbjct: 61 GHYGVALLSRSPPLALHKGFEGDDEESQKRFIRGTYADSNGQPVTIMNGYFPQGESRDHP 120 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175 K+ K + + ++PLI GD NI PQ D + F Sbjct: 121 TKFPAKQRFYENLQALLEGHFSNDQPLIVMGDVNISPQDCDIGIGADNAKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232 E R+ ++L+N G D+ R + +S++DY + + +G+RID IM S Sbjct: 181 LPEEREWMERLKNWGLVDSFRYLYPEVSDRFSWFDYRSRGFEDEPKRGLRIDLIMTSTGL 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + +A +D RG KPSDH P+ + L Sbjct: 241 QPRIKAAGVDYDLRGMEKPSDHAPIWLEL 269 >gi|148827197|ref|YP_001291950.1| exonuclease III [Haemophilus influenzae PittGG] gi|148718439|gb|ABQ99566.1| exodeoxyribonuclease III [Haemophilus influenzae PittGG] Length = 267 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 81/267 (30%), Positives = 128/267 (47%), Gaps = 8/267 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A I++ PD+I LQE K D+ FP+E ++L YH+ GQK Sbjct: 1 MKFISFNINGLRARPHQLEAIIEKYQPDVIGLQEIKVADEAFPYEITENLGYHVFHHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122 + GVA+L+K +P + P D+ D Q R I A L + N Y P G T Sbjct: 61 GHYGVALLTKQEPKVVRRGFPTDNEDAQKRIIMADLETEFGLLTVINGYFPQGESRAHET 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + ++ + + P++ GD NI P + + F Sbjct: 121 KFPAKEKFYADLQQYLEKEHDKSNPILIMGDMNISPSDLDIGIGDENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R +Q+L + G D+ R + T + +S++DY + + N+G+RIDHI++S + Sbjct: 181 PEERAWYQRLYDYGLEDSFRNLNPTANDKFSWFDYRSKGFDDNRGLRIDHILVSQKLAER 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262 I R KPSDH P+ Sbjct: 241 CVDVGIALDIRAMEKPSDHAPIWAEFK 267 >gi|317506931|ref|ZP_07964703.1| exodeoxyribonuclease III [Segniliparus rugosus ATCC BAA-974] gi|316254859|gb|EFV14157.1| exodeoxyribonuclease III [Segniliparus rugosus ATCC BAA-974] Length = 267 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 76/265 (28%), Positives = 126/265 (47%), Gaps = 7/265 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+NSIRAR+ +W++ + D++ LQETK D FP E + Y + G Sbjct: 1 MRIATWNINSIRARVDRAVSWLERSQVDVLALQETKCADAQFPEEPFREAGYAVAHTGNG 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIE-----ATFTINTQTLRIGNLYLPHGNP 118 +NGVAI+S+ ++ G + E +RI +LY+P+G Sbjct: 61 QWNGVAIVSRLGLADVQVGFDGQPGFHKDPEAEALPEPRAIAATCGGVRIWSLYVPNGRD 120 Query: 119 ITSTKYDDKISWIKRFLRFASQRL--ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + Y K+ W+ A L + + + GD+NI P D ++P ++ + Sbjct: 121 LADRHYGYKLEWLAALRGQAEGWLAADADAKIALTGDWNIAPFDEDVWDPSFFDGKTHTS 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 R +F + GFTD R +Y++WDY + + +G+RID ++ SP + + Sbjct: 181 GPERDAFFAFEKSGFTDVARPHTPGPGVYTYWDYTQLRFPRREGMRIDFVLGSPALAASV 240 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSL 261 A +D + R SDH PV+V L Sbjct: 241 TGASVDREERKGKGASDHAPVVVEL 265 >gi|222110327|ref|YP_002552591.1| exodeoxyribonuclease iii xth [Acidovorax ebreus TPSY] gi|221729771|gb|ACM32591.1| exodeoxyribonuclease III Xth [Acidovorax ebreus TPSY] Length = 258 Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats. Identities = 93/258 (36%), Positives = 141/258 (54%), Gaps = 1/258 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+NS+ R+ + AW++ N D I LQE K D+ FP + ++ YH GQK Sbjct: 1 MQIATWNINSLSVRLPQVLAWLEANPVDAIGLQELKLVDEKFPHDAFEAAGYHAVCFGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAILS+ ++V ++PG + AT LR+ N Y +G + K Sbjct: 61 TYNGVAILSRTPLRDVVRNIPGHGDEQARVI-AATLDTPEGPLRLVNCYFVNGQAPGTEK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W++ + L L+ GD+N+ P+ D ++P+ ++ T+E RQ F Sbjct: 120 FSYKLLWLEALRDWLRTELAAHPRLVLVGDFNVAPEDRDSFDPVGLKDTIHHTVEERQHF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q L +G TDA R YS+WDY + KN+G+RIDHI++S + + RID Sbjct: 180 QDLLGLGLTDAFRLFDQPEKSYSWWDYRMLGFQKNRGLRIDHILVSTALRPSVTACRIDR 239 Query: 244 KPRGWTKPSDHTPVIVSL 261 PR +PSDH PV+VSL Sbjct: 240 APRKNPQPSDHAPVVVSL 257 >gi|15597741|ref|NP_251235.1| exonuclease III [Pseudomonas aeruginosa PAO1] gi|218891476|ref|YP_002440343.1| exonuclease III [Pseudomonas aeruginosa LESB58] gi|9948603|gb|AAG05933.1|AE004682_5 exodeoxyribonuclease III [Pseudomonas aeruginosa PAO1] gi|218771702|emb|CAW27476.1| exodeoxyribonuclease III [Pseudomonas aeruginosa LESB58] Length = 270 Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats. Identities = 88/269 (32%), Positives = 131/269 (48%), Gaps = 11/269 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +RAR H LAA I+ + PD+I LQETK D FP +++L YH+ GQK Sbjct: 1 MKIVSFNINGLRARPHQLAALIERHQPDVIGLQETKVADDQFPQAEIEALGYHVHYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122 + GVA+LS+ P+E+ P D + Q RFI TF + + N Y P G Sbjct: 61 GHYGVALLSRQAPLELHRGFPSDGEESQRRFIWGTFSDAQGNPITVMNGYFPQGENREHP 120 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175 K+ K + + E+ L+ GD NI P+ D + F Sbjct: 121 TKFPAKQRFYADLQSLLENSFKPEQALVVMGDINISPEDCDIGIGEENRKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKN--KGIRIDHIMLSPEA 232 E R+ L+N G D+ RA + + +S++DY + + N +G+RID I+ S Sbjct: 181 LPEEREWLATLKNWGLVDSFRALNPEVNDRFSWFDYRSRGFEDNPKRGLRIDVILASRVL 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 S A ID RG KPSDH P+ + L Sbjct: 241 QSRFKDAGIDYDLRGMEKPSDHAPIWLEL 269 >gi|84516350|ref|ZP_01003710.1| exodeoxyribonuclease III [Loktanella vestfoldensis SKA53] gi|84510046|gb|EAQ06503.1| exodeoxyribonuclease III [Loktanella vestfoldensis SKA53] Length = 259 Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats. Identities = 119/258 (46%), Positives = 162/258 (62%), Gaps = 1/258 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+N+N ++ARI L W+ ++ PD+ LQE K+ D FP + ++ Y +ET GQK Sbjct: 1 MKIATFNINGVKARIETLCDWLDDSAPDVAILQEIKSVDDGFPRQLIEDRGYTLETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVAILSK ++ LPGDD D QAR+IEAT + +RI LYLP+GNP K Sbjct: 61 GFNGVAILSKLPLEDVTRGLPGDDADEQARWIEAT-VVGDVAVRICGLYLPNGNPAPGPK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 +D K++W++R L A+ L E P + AGDYNIIPQ D P +W +DA F E R ++ Sbjct: 120 FDYKLAWMERLLARATALLADEMPALMAGDYNIIPQGMDAARPQVWRDDALFRPESRAAY 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +++ N+GFT+A R YSFWDY A +W KN GIRIDH +L+P+ LL A I+ Sbjct: 180 RRILNLGFTEAFRTLEPGAGHYSFWDYQAGAWEKNNGIRIDHFLLTPQCADLLAGAWIEK 239 Query: 244 KPRGWTKPSDHTPVIVSL 261 R KPSDH PV V L Sbjct: 240 DLRARDKPSDHVPVWVEL 257 >gi|90417808|ref|ZP_01225720.1| exodeoxyribonuclease III [Aurantimonas manganoxydans SI85-9A1] gi|90337480|gb|EAS51131.1| exodeoxyribonuclease III [Aurantimonas manganoxydans SI85-9A1] Length = 276 Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats. Identities = 107/259 (41%), Positives = 159/259 (61%), Gaps = 5/259 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A++N+N + R+ L W+ E PD +CLQE K+ D+ FP + ++ Y GQK Sbjct: 1 MKIASFNINGVNGRLPVLLRWLAEAEPDAVCLQELKSPDEKFPIDAIREAGYGAIWHGQK 60 Query: 64 SYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 S+NGVAIL++ P+E LPGDD D Q+R++EA + IG LYLP+GNP Sbjct: 61 SWNGVAILARGTDPLETRRGLPGDDDDHQSRYLEAAVKG----VLIGCLYLPNGNPAPGP 116 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K+D K+ W+ RF A+ + P++ AGDYN+IP D Y P W +DA F EVR++ Sbjct: 117 KFDYKLRWLGRFANHAADLMATGAPVVLAGDYNVIPTELDVYKPEHWVDDALFRPEVREA 176 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F +L + G+TDAIR+ H +Y+FWDY ++W ++ G+R+DH++LSP L +A + Sbjct: 177 FHRLLDAGWTDAIRSLHPEASIYTFWDYLRNAWGRDAGLRLDHLLLSPTLAPRLLAAGVH 236 Query: 243 TKPRGWTKPSDHTPVIVSL 261 RGW K SDH PV + + Sbjct: 237 RDVRGWEKASDHAPVWIEI 255 >gi|311112410|ref|YP_003983632.1| exodeoxyribonuclease III [Rothia dentocariosa ATCC 17931] gi|310943904|gb|ADP40198.1| exodeoxyribonuclease III [Rothia dentocariosa ATCC 17931] Length = 335 Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats. Identities = 75/265 (28%), Positives = 123/265 (46%), Gaps = 7/265 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSIRAR + W+ + D++ LQETKT+D+ FPFE + L Y + G Sbjct: 69 MKIATWNVNSIRARADRIEDWLDKTEVDVLALQETKTKDETFPFELFEFLGYEVAHYGLN 128 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLD----VQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +NGVAI S+ + P A +RI +LY+P+G + Sbjct: 129 QWNGVAIASRVGLDSVERTFPNQPAFGKPGDPAEIEARAIGATCNGVRIWSLYVPNGRGL 188 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEE--PLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 T K+ W+++ + L + GD+N+ P+ D ++ + + + Sbjct: 189 TDPHMAYKMEWMRQLRTNVNGWLHADPAAQFALVGDWNVAPEDTDVWDIDFFRENDLTHV 248 Query: 178 EVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 + + + Y++WDY A +SKN+G+RID + SP + + Sbjct: 249 SAPEREAFYALLNDEGLVDPVRPYTQGEYTYWDYQAGRFSKNEGMRIDFQLCSPALAARV 308 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSL 261 +A ID + R SDHTPV++ L Sbjct: 309 ENAWIDREEREGDGASDHTPVVIEL 333 >gi|290512900|ref|ZP_06552264.1| exodeoxyribonuclease III [Klebsiella sp. 1_1_55] gi|289774513|gb|EFD82517.1| exodeoxyribonuclease III [Klebsiella sp. 1_1_55] Length = 301 Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats. Identities = 81/268 (30%), Positives = 125/268 (46%), Gaps = 8/268 (2%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + ++N+N +RAR H LAA ++++ PD+I LQETK D FP E + L Y++ G Sbjct: 32 ATMKFVSFNINGLRARPHQLAAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHG 91 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 QK + GVA+L+K PI + P D + Q R I A + + N Y P G Sbjct: 92 QKGHYGVALLTKDTPIAVRRGFPDDGEEAQRRIIMAEIPSPFGNVTVINGYFPQGESRDH 151 Query: 122 -TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDAC 174 TK+ K ++ + + L E P++ GD NI P + + Sbjct: 152 ETKFPAKAAFYQNLQNYLETELNKENPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCS 211 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 F E R+ +L G D R + +S++DY + + N+G+RID ++ S Sbjct: 212 FLPEEREWMDRLLGWGLVDTWRQANPDNQEHFSWFDYRSKGFDDNRGLRIDLLLASQPLA 271 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSL 261 ID + RG KPSDH PV + Sbjct: 272 QRCVETGIDYEIRGMEKPSDHAPVWATF 299 >gi|302382037|ref|YP_003817860.1| exodeoxyribonuclease III Xth [Brevundimonas subvibrioides ATCC 15264] gi|302192665|gb|ADL00237.1| exodeoxyribonuclease III Xth [Brevundimonas subvibrioides ATCC 15264] Length = 257 Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats. Identities = 91/258 (35%), Positives = 139/258 (53%), Gaps = 3/258 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+N+N I +R+ NL W+ PD+ CLQE K FP ++ YH G+ Sbjct: 1 MRIATFNINGINSRLPNLLEWLAGTQPDVACLQELKAPQDRFPEGAIEEAGYHAAWVGEA 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVAILS++ P + + + +G LYLP+GNP K Sbjct: 61 RWNGVAILSRHGPPVVTRRAL---PGDRKDVQSRYLEAAVNGVLVGCLYLPNGNPQPGPK 117 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 +D K++W +R + A + E P++ AGDYN++P D Y+ W+ +A E R +F Sbjct: 118 FDYKLAWFERLIAHAGTLFDTEAPVVLAGDYNVVPTEADIYDSRSWKKNALLQPESRAAF 177 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 ++ + G+TDA+R +Y+FWDY D WS+N G+RIDH++L+P+A L A +D Sbjct: 178 ARMLDDGWTDALRERFPHEAVYTFWDYLRDGWSRNAGLRIDHLLLNPQAAGRLVDAGVDA 237 Query: 244 KPRGWTKPSDHTPVIVSL 261 RG K SDH P + L Sbjct: 238 GVRGREKASDHAPAWIEL 255 >gi|28869934|ref|NP_792553.1| exodeoxyribonuclease III [Pseudomonas syringae pv. tomato str. DC3000] gi|28853179|gb|AAO56248.1| exodeoxyribonuclease III [Pseudomonas syringae pv. tomato str. DC3000] Length = 270 Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats. Identities = 90/269 (33%), Positives = 135/269 (50%), Gaps = 11/269 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +RAR H LAA I ++ PD+I LQETK D+ FP +++L YH+ GQK Sbjct: 1 MKIVSFNINGLRARPHQLAALIDKHQPDVIGLQETKVSDEQFPLADVEALGYHVHFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122 + GVA+LS+ P+ + GDD + Q RFI T+ N Q + I N Y P G Sbjct: 61 GHYGVALLSRNPPLALHKGFEGDDEESQKRFIRGTYADSNGQPVTIMNGYFPQGESRDHP 120 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175 K+ K + + E+PLI GD NI PQ D + F Sbjct: 121 TKFPAKQRFYENLQALLEGHFSNEQPLIVMGDVNISPQDCDIGIGADNAKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232 E R+ ++L+N G D+ R + +S++DY + + +G+RID IM S Sbjct: 181 LPEEREWMERLKNWGLVDSFRYLYPEVSDRFSWFDYRSRGFEDEPKRGLRIDLIMTSTGL 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + +A +D RG KPSDH P+ + L Sbjct: 241 QPRIRAAGVDYDLRGMEKPSDHAPIWLEL 269 >gi|56460559|ref|YP_155840.1| exonuclease III [Idiomarina loihiensis L2TR] gi|56179569|gb|AAV82291.1| Exonuclease III [Idiomarina loihiensis L2TR] Length = 269 Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats. Identities = 84/268 (31%), Positives = 132/268 (49%), Gaps = 9/268 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N IRAR+H L A I ++ PD+I LQETK D FP + ++++ YH+ GQK Sbjct: 1 MKIISFNINGIRARLHQLQAVIDKHQPDVIGLQETKVHDDQFPLKDVEAMGYHVIYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI-NTQTLRIGNLYLPHGNPITST 122 + GVA+LSK P DD + Q R I + + + +RI N Y P G Sbjct: 61 GHYGVAMLSKKPLENPQFGFPTDDDEAQRRMIMGDYPLADGGHVRILNGYFPQGESRDHP 120 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175 K+ K + + + + L E+P+I GD NI + + F Sbjct: 121 TKFPAKEKFYQDLMSYLDNDLSPEQPVIVMGDVNISRIDLDIGIGENNAKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R+ Q+L + GFTD R + + +S++DY + + N+G+RID I+ + Sbjct: 181 LPEEREWIQRLMDWGFTDTYRQLNPDVDNQFSWFDYRSRGFDDNRGLRIDLILATKALAK 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + ID + RG KPSDH PV + Sbjct: 241 QCEDSGIDYELRGIEKPSDHAPVWSTFK 268 >gi|182678385|ref|YP_001832531.1| exodeoxyribonuclease III [Beijerinckia indica subsp. indica ATCC 9039] gi|182634268|gb|ACB95042.1| exodeoxyribonuclease III [Beijerinckia indica subsp. indica ATCC 9039] Length = 258 Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats. Identities = 127/258 (49%), Positives = 165/258 (63%), Gaps = 1/258 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+NSIR R +L ++ E PDI+CLQE K D FPF +++ YH GQK Sbjct: 1 MQIATWNINSIRQRTEHLLRYLDEVAPDIVCLQELKCTDDAFPFAAIEAKGYHAAVHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVAILSK IE+ LPGD D AR++E LRI +LYLP+GNP + K Sbjct: 61 GFNGVAILSKQP-IEVKCGLPGDSTDEHARYVEGVIDSEIGRLRIVSLYLPNGNPPDTDK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K++W+ R + AS L+ EE L+ AGDYN+IP P DCY+P +W DA F R F Sbjct: 120 YTYKLAWMDRLIAHASTLLQCEELLVLAGDYNVIPMPGDCYDPAVWATDALFLPPTRARF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + L N+GFT+A+RA D LY+FWDY A +W +NKGI IDH++LSP+A L ID Sbjct: 180 RSLLNLGFTNALRAVSDEPGLYTFWDYQAGAWQRNKGICIDHLLLSPQAVDHLQHVVIDK 239 Query: 244 KPRGWTKPSDHTPVIVSL 261 + RG KPSDH PV V+L Sbjct: 240 ERRGEDKPSDHVPVRVTL 257 >gi|182435048|ref|YP_001822767.1| putative exonuclease [Streptomyces griseus subsp. griseus NBRC 13350] gi|178463564|dbj|BAG18084.1| putative exonuclease [Streptomyces griseus subsp. griseus NBRC 13350] Length = 259 Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats. Identities = 77/260 (29%), Positives = 127/260 (48%), Gaps = 1/260 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+NVNSI AR+ L AW++ + D++C+QETK + FP E L+ Y Sbjct: 1 MRIATYNVNSITARLPRLLAWLESSGTDVLCVQETKCTAEQFPAEALREAGYASAVNATG 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVA+LS+ ++VT LP + A LR+ ++Y+P+G + Sbjct: 61 RWNGVALLSRVGLSDVVTGLPDGPEYEGVQEPRAISATCGP-LRLWSVYVPNGREVEHAH 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W++ + + P GD+N+ P D ++P ++E T R + Sbjct: 120 YAYKLRWLEALRKAVAADAAKALPFAVLGDFNVAPTDEDVWDPALFEGATHVTPAERAAL 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 L+ G ++ Y+FWDY + KNKG+RID + T+ + + +D Sbjct: 180 AALEAEGLSEVHPRPLKYDRAYTFWDYRELRFPKNKGMRIDLTFGNAPFTAAVKDSYVDR 239 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 + R SDH PV+V LD+ Sbjct: 240 EERKGKGASDHAPVVVDLDL 259 >gi|331673295|ref|ZP_08374063.1| exodeoxyribonuclease III [Escherichia coli TA280] gi|331069493|gb|EGI40880.1| exodeoxyribonuclease III [Escherichia coli TA280] Length = 272 Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats. Identities = 79/268 (29%), Positives = 125/268 (46%), Gaps = 8/268 (2%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + ++N+N +RAR H L A ++++ PD+I LQETK D FP E + L Y++ G Sbjct: 3 ATMKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHG 62 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 QK + GVA+L+K PI + PGDD + Q R I A + + N Y P G Sbjct: 63 QKGHYGVALLTKETPITVRRGFPGDDEEAQRRIIMAEIPSTLGNVTVINGYFPQGESRDH 122 Query: 122 TK-YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDAC 174 + K + + + L+ E P++ GD NI P + + Sbjct: 123 PIKFPAKAQFYQNLQNYLETELKRENPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCS 182 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 F E R+ ++L + G D R + +S++DY + + N+G+RID ++ S Sbjct: 183 FLPEEREWMERLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLA 242 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSL 261 ID + R KPSDH PV + Sbjct: 243 ECCVETGIDYEIRSMEKPSDHAPVWATF 270 >gi|271500687|ref|YP_003333712.1| exodeoxyribonuclease III [Dickeya dadantii Ech586] gi|270344242|gb|ACZ77007.1| exodeoxyribonuclease III [Dickeya dadantii Ech586] Length = 268 Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats. Identities = 87/268 (32%), Positives = 132/268 (49%), Gaps = 8/268 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H LAA I+++ PD+I LQETK D FP + ++ YH+ GQK Sbjct: 1 MKFVSFNINGLRARPHQLAAVIEQHQPDVIGLQETKVHDDMFPLDDVKQFGYHVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122 + GVA+L+K +P+ + P DD D Q R I A TL + N Y P G Sbjct: 61 GHYGVALLTKAEPLAVRRGFPTDDEDAQRRIIMADLATPLGTLTVVNGYFPQGESRDHPV 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + + + Q + ++P++ GD NI P D + F Sbjct: 121 KFPAKTRFYQDLQHYLEQHHQADQPVLIMGDMNISPTDLDIGIGEDNRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ ++L+N G D RA + +S++DY + + N+G+RID IM + S Sbjct: 181 PEEREWMERLKNWGLVDTFRAANPECQDKFSWFDYRSSGFDDNRGLRIDLIMATSPLASR 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + ID RG KPSDH PV + Sbjct: 241 CTATGIDYAIRGMEKPSDHAPVWAEFTL 268 >gi|94969020|ref|YP_591068.1| exodeoxyribonuclease III (xth) [Candidatus Koribacter versatilis Ellin345] gi|94551070|gb|ABF40994.1| exodeoxyribonuclease III (xth) [Candidatus Koribacter versatilis Ellin345] Length = 260 Score = 206 bits (524), Expect = 3e-51, Method: Composition-based stats. Identities = 108/257 (42%), Positives = 157/257 (61%), Gaps = 7/257 (2%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSY 65 +A+WNVNSIRAR+ ++ WI +N+PD++ +QE K + FP E +L Y QK+Y Sbjct: 9 IASWNVNSIRARLGIVSDWIAKNHPDVLLMQELKATE--FPAEAFHALGYQAAAVTQKAY 66 Query: 66 NGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYD 125 NGVA+LS+ + T L GD+ D AR++E LR+ N+Y P+GNPI + K+ Sbjct: 67 NGVAVLSRLPVETVRTALRGDEADSHARYLETRIDG----LRVVNIYAPNGNPIGTEKFS 122 Query: 126 DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQK 185 K++W+ R ++ L+ + P + AGDYNIIP+ DC+ P W DA F E R+ ++ Sbjct: 123 YKLAWLDRLIQEMQSWLKDDIPTVVAGDYNIIPEDIDCHKPSSWIRDALFQPEPRERYRA 182 Query: 186 LQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK 244 L MG+TDA R H ++FWDY+ ++ N+GIRIDH +LSP L IDT+ Sbjct: 183 LLAMGYTDAFRTLHPGETGQFTFWDYFRKAFETNRGIRIDHFLLSPSLKPRLAKCHIDTE 242 Query: 245 PRGWTKPSDHTPVIVSL 261 PR KPSDHTP+++ L Sbjct: 243 PRKLEKPSDHTPIVLEL 259 >gi|330960959|gb|EGH61219.1| exonuclease III [Pseudomonas syringae pv. maculicola str. ES4326] Length = 270 Score = 206 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 92/269 (34%), Positives = 138/269 (51%), Gaps = 11/269 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +RAR H LAA I+++ PD+I LQETK D+ FP +++L YH+ GQK Sbjct: 1 MKIVSFNINGLRARPHQLAALIEKHQPDVIGLQETKVSDEQFPHADIEALGYHVHFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122 + GVA+LS+ P+E+ GD+ D Q RFI + N Q + I N Y P G Sbjct: 61 GHYGVALLSRNPPLELHKGFEGDNEDAQKRFIRGAYADSNGQPIIIMNGYFPQGESRDHP 120 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175 K+ K + + + R E+PLI GD NI PQ D + F Sbjct: 121 TKFPAKQRFYEDLQQLLESRFSNEQPLIVMGDVNISPQDCDIGIGADNAKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232 E R+ ++L+N G D+ R H +S++DY + + +G+RID IM S Sbjct: 181 LPEEREWMERLKNWGMVDSFRYLHPEVSDRFSWFDYRSRGFEDEPKRGLRIDLIMTSTGL 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + +A +D RG KPSDH P+ + L Sbjct: 241 QPRIKAAGVDYDLRGMEKPSDHAPIWLEL 269 >gi|167034007|ref|YP_001669238.1| exodeoxyribonuclease III Xth [Pseudomonas putida GB-1] gi|166860495|gb|ABY98902.1| exodeoxyribonuclease III Xth [Pseudomonas putida GB-1] Length = 265 Score = 206 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 100/262 (38%), Positives = 152/262 (58%), Gaps = 5/262 (1%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 M + +AT+N+N IR+R+ L AW++ PDI CLQE K ++ FP E +++ Y Sbjct: 1 MKALKIATFNINGIRSRLPALLAWLEREQPDIACLQELKAANQQFPREAIEAAGYGCLYQ 60 Query: 61 GQKSYNGVAILSKY-QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 GQ S+NGVAIL++ +P+E+ LPG D Q+R++EA + +G LYLP+GNP Sbjct: 61 GQPSWNGVAILARDSEPLEVRRGLPGMQDDQQSRYLEAAV----HGVLVGCLYLPNGNPQ 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K+D K+ W + ++ A P + AGD+N++P D Y+P W DA E Sbjct: 117 PGPKFDYKLRWFECLIKHAQTLHVSRHPTVLAGDFNVVPTDLDIYSPRSWLKDALLQPES 176 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R F+ L G+ DA+R + +Y+FWDY+ + W++N G+RIDH++L+P + L A Sbjct: 177 RACFEALLAQGWVDAVRHLYPEQRIYTFWDYFRNHWARNAGLRIDHLLLNPGLSPYLKGA 236 Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261 +D R K SDH PV + L Sbjct: 237 GVDAWVRNEAKASDHAPVWIQL 258 >gi|187478127|ref|YP_786151.1| exodeoxyribonuclease III [Bordetella avium 197N] gi|115422713|emb|CAJ49240.1| exodeoxyribonuclease III [Bordetella avium 197N] Length = 261 Score = 206 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 94/261 (36%), Positives = 134/261 (51%), Gaps = 1/261 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS++ R+ + W+ N D +CLQE K D FP E + YH GQK Sbjct: 1 MQLATWNVNSLKVRLPQVIDWLNANPVDALCLQELKLADDKFPLEAFTEIGYHAAWAGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAILS+ + ++PG + Q T +R+ + Y P+G + S K Sbjct: 61 TYNGVAILSREPGFALTRNIPGYEDPQQRVI-AVTLPSPAGDVRVISAYCPNGQSLDSDK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W + + L L GDYN+ P D +NP WE + RQ+F Sbjct: 120 YPYKLEWFGALRHWLEEELRTYPRLAILGDYNVAPADEDVHNPEKWEGQVLVSAPERQAF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q L ++G TDA R +S+WDY + +N G+RIDHI+LS + ID Sbjct: 180 QALLDLGLTDAFRLFAQPEKSFSWWDYRMFGFRRNAGLRIDHILLSDALKPTCVACIIDK 239 Query: 244 KPRGWTKPSDHTPVIVSLDIP 264 PRG +PSDHTPV+ +L + Sbjct: 240 GPRGNEQPSDHTPVVTTLKLS 260 >gi|330824047|ref|YP_004387350.1| exodeoxyribonuclease III Xth [Alicycliphilus denitrificans K601] gi|329309419|gb|AEB83834.1| exodeoxyribonuclease III Xth [Alicycliphilus denitrificans K601] Length = 258 Score = 206 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 92/258 (35%), Positives = 143/258 (55%), Gaps = 1/258 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+NS+ R+ + AW+ N D I LQE K D+ FP + ++ YH GQK Sbjct: 1 MHLATWNINSLSVRLPQVLAWLVANPVDAIGLQELKLVDEKFPHDAFEAAGYHAVCFGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAI+S+ P ++V ++PG D + AT + LR+ N Y +G + K Sbjct: 61 TYNGVAIVSRTPPRDVVRNIPGHDDEQARVI-AATLDVEGGPLRLVNCYFVNGQAPGTDK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W+ + L L+ GD+N+ P+ D Y+P+ ++ T+E RQ F Sbjct: 120 FAYKLQWLAALHDWLRAELAAHPRLVLVGDFNVAPEDRDSYDPVGLKDTIHHTVEERQHF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 ++L +G TDA R YS+WDY + KN+G+RIDHI++S + + + RID Sbjct: 180 RQLLELGLTDAFRMFEQPEKSYSWWDYRQLGFQKNRGLRIDHILVSEALRAGVTACRIDR 239 Query: 244 KPRGWTKPSDHTPVIVSL 261 PR +PSDH PV+ +L Sbjct: 240 APRKNPQPSDHAPVVATL 257 >gi|161524301|ref|YP_001579313.1| exodeoxyribonuclease III Xth [Burkholderia multivorans ATCC 17616] gi|221214798|ref|ZP_03587767.1| exodeoxyribonuclease III [Burkholderia multivorans CGD1] gi|160341730|gb|ABX14816.1| exodeoxyribonuclease III Xth [Burkholderia multivorans ATCC 17616] gi|221165337|gb|EED97814.1| exodeoxyribonuclease III [Burkholderia multivorans CGD1] Length = 272 Score = 206 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 84/256 (32%), Positives = 133/256 (51%), Gaps = 1/256 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ R ++ W+ ++ D++CLQE K D+ FP L++ Y GQK Sbjct: 15 MKIATWNVNSLNVRKQHVLDWLAQSAVDVLCLQELKLPDEKFPRADLEAAGYRSWFAGQK 74 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAIL++ + + + + + +RI + Y P+G + S K Sbjct: 75 TYNGVAILARDTLPFDESDVVRNIPGFEDTQQRV-IAVTIDGVRIVSAYFPNGQAVGSDK 133 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W+ + ++ L GDYNI P+ D ++P WE + + + R F Sbjct: 134 FLYKMQWLDALHAWLRTEMQRYPKLALLGDYNIAPEDRDVHDPAKWEGENLVSPQERAHF 193 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 KL +GF DA R +++WDY ++ +N G+RIDHI+LSP S +D Sbjct: 194 AKLIELGFVDAFRRFEQPEKTFTWWDYRMFAFRRNAGLRIDHILLSPALAGSCTSCEVDR 253 Query: 244 KPRGWTKPSDHTPVIV 259 PR W +PSDHTPV+ Sbjct: 254 VPRTWEQPSDHTPVVA 269 >gi|308050255|ref|YP_003913821.1| exodeoxyribonuclease III [Ferrimonas balearica DSM 9799] gi|307632445|gb|ADN76747.1| Exodeoxyribonuclease III [Ferrimonas balearica DSM 9799] Length = 268 Score = 206 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 80/267 (29%), Positives = 131/267 (49%), Gaps = 9/267 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR+H L A I ++ PD+I LQETK +D FP E ++++ YH+ GQK Sbjct: 1 MKFVSFNINGLRARLHQLQALIDKHQPDVIGLQETKVDDPQFPLEAVEAMGYHVAFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHL-PGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121 + GVA+L+K P+ + ++ + + N Q + + N Y P G Sbjct: 61 GHYGVAMLTKQVPLAVQKGFATDEEDAQRRMIMVTVADANGQPVHVLNGYFPQGENRDHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175 TK+ K + + + + +E ++ GD NI P + F Sbjct: 121 TKFPAKRRFYADLMSHLNTHRQADEQVVVMGDINISPTDLDIGIGEPNAKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHL-YSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R+ L N G TD+ R + YS++DY + + N+G+RID I+ S T+ Sbjct: 181 LPEEREWLATLLNWGLTDSFRHLNPEEAQTYSWFDYRSRGFDDNRGLRIDVILTSAPLTA 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261 L SA +D + RG KPSDH P+ ++ Sbjct: 241 RLDSAGVDYELRGIEKPSDHAPIWTTI 267 >gi|290956326|ref|YP_003487508.1| exonuclease [Streptomyces scabiei 87.22] gi|260645852|emb|CBG68943.1| putative exonuclease [Streptomyces scabiei 87.22] Length = 259 Score = 206 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 75/260 (28%), Positives = 124/260 (47%), Gaps = 1/260 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSI AR+ L AW++ + D++CLQE K + FP + L+ Y Sbjct: 1 MRIATWNVNSITARLPRLLAWLESSGTDVLCLQEAKIAEDGFPLDALREAGYEAAVHATG 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVA++S+ ++V LPGD + A +R+ ++Y+P+G + Sbjct: 61 RWNGVAVISRVGIEDVVKGLPGDPGYDGSVEPRAISATCGP-VRVWSVYVPNGREVDHPH 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W + + P GDYN+ P D Y+ +E T R + Sbjct: 120 YAYKLQWFEALKAAVAGDAAGSRPFAVMGDYNVAPTDDDVYDVAAFEGLTHVTPAERAAL 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 L+ G TD + H +++WDY + KN+G+RID + + + + +D Sbjct: 180 ASLREAGLTDVVPRPLKYEHPFTYWDYRQLCFPKNRGMRIDLVYGNETFAKAVTDSYVDR 239 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 + R SDH PV+V L++ Sbjct: 240 EERKGKGASDHAPVVVDLEV 259 >gi|209542628|ref|YP_002274857.1| exodeoxyribonuclease III Xth [Gluconacetobacter diazotrophicus PAl 5] gi|209530305|gb|ACI50242.1| exodeoxyribonuclease III Xth [Gluconacetobacter diazotrophicus PAl 5] Length = 258 Score = 206 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 98/259 (37%), Positives = 138/259 (53%), Gaps = 3/259 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A+WNVNS+R R ++ W++ PD++ LQE K ED FP E ++ Y GQK Sbjct: 1 MKIASWNVNSVRQRQAHVLDWLEREKPDLLGLQEIKCEDAAFPAEAFRAAGYDCVVVGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 SYNGVAILS+ I L GNLYLP+GN S Sbjct: 61 SYNGVAILSRLPFSVTAR---ALPFLDGEALQARYVEIEAGGLTFGNLYLPNGNSGGSAG 117 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y+ K+++++ A LE + AGDYN+ P DC + DA E R +F Sbjct: 118 YEAKLAFMEALALHARALLEAGRDFVLAGDYNVCPTDEDCAPGALPPTDALVRPESRAAF 177 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 ++L +G TDA+RA H Y+FWDY A +W ++ G+RIDH +LSP L SA+ D Sbjct: 178 RRLIWLGLTDALRALHPHGRYYTFWDYQAGAWPRDCGLRIDHALLSPRIAERLDSAQPDR 237 Query: 244 KPRGWTKPSDHTPVIVSLD 262 RG +PSDH P++++LD Sbjct: 238 DERGRAQPSDHVPLVITLD 256 >gi|300898982|ref|ZP_07117271.1| exodeoxyribonuclease III [Escherichia coli MS 198-1] gi|300357379|gb|EFJ73249.1| exodeoxyribonuclease III [Escherichia coli MS 198-1] Length = 272 Score = 206 bits (523), Expect = 3e-51, Method: Composition-based stats. Identities = 79/268 (29%), Positives = 125/268 (46%), Gaps = 8/268 (2%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + ++N+N +RAR H L A ++++ PD+I LQETK D FP E + L Y++ G Sbjct: 3 ATMKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHG 62 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 QK + GVA+L+K PI + PGDD + Q R I A + + N Y P G Sbjct: 63 QKGHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSTLGNVTVINGYFPQGESRDH 122 Query: 122 TK-YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDAC 174 + K + + + L+ E P++ GD NI P + + Sbjct: 123 PIKFPAKAQFYQNLQNYLETELKRENPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCS 182 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 F E R+ ++L + G D R + +S++DY + + N+G+RID ++ S Sbjct: 183 FLPEEREWMERLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLA 242 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSL 261 ID + R KPSDH PV + Sbjct: 243 ECCVETGIDYEIRSMEKPSDHAPVWATF 270 >gi|117623921|ref|YP_852834.1| exonuclease III [Escherichia coli APEC O1] gi|237705700|ref|ZP_04536181.1| exonuclease III [Escherichia sp. 3_2_53FAA] gi|301026483|ref|ZP_07189913.1| exodeoxyribonuclease III [Escherichia coli MS 69-1] gi|91072540|gb|ABE07421.1| exodeoxyribonuclease III [Escherichia coli UTI89] gi|115513045|gb|ABJ01120.1| exodeoxyribonuclease III [Escherichia coli APEC O1] gi|226900457|gb|EEH86716.1| exonuclease III [Escherichia sp. 3_2_53FAA] gi|300395501|gb|EFJ79039.1| exodeoxyribonuclease III [Escherichia coli MS 69-1] gi|315286456|gb|EFU45891.1| exodeoxyribonuclease III [Escherichia coli MS 110-3] gi|315299863|gb|EFU59103.1| exodeoxyribonuclease III [Escherichia coli MS 16-3] Length = 272 Score = 206 bits (523), Expect = 4e-51, Method: Composition-based stats. Identities = 79/268 (29%), Positives = 125/268 (46%), Gaps = 8/268 (2%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + ++N+N +RAR H L A ++++ PD+I LQETK D FP E + L Y++ G Sbjct: 3 ATMKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHG 62 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 QK + GVA+L+K PI + PGDD + Q R I A + + N Y P G Sbjct: 63 QKGHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSPLGNVTVINGYFPQGESRDH 122 Query: 122 TK-YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDAC 174 + K + + + L+ E P++ GD NI P + + Sbjct: 123 PIKFPAKAQFYQNLQNYLETELKRENPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCS 182 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 F E R+ ++L + G D R + +S++DY + + N+G+RID ++ S Sbjct: 183 FLPEEREWMERLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLA 242 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSL 261 ID + R KPSDH PV + Sbjct: 243 ECCVETGIDYEIRSMEKPSDHAPVWATF 270 >gi|145641817|ref|ZP_01797392.1| exodeoxyribonuclease III [Haemophilus influenzae R3021] gi|145273439|gb|EDK13310.1| exodeoxyribonuclease III [Haemophilus influenzae 22.4-21] Length = 267 Score = 206 bits (523), Expect = 4e-51, Method: Composition-based stats. Identities = 83/267 (31%), Positives = 128/267 (47%), Gaps = 8/267 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A I++ PD+I LQE K D+ FP+E ++L YH+ GQK Sbjct: 1 MKFISFNINGLRARPHQLEAIIEKYQPDVIGLQEIKVADEAFPYEITENLGYHVFHHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122 + GVA+L+K +P I P D+ D Q R I A L I N Y P G T Sbjct: 61 GHYGVALLTKQEPKVIRRGFPTDNEDAQKRIIMADLETEFGLLTIINGYFPQGESRAHET 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + ++ + + P++ GD NI P + + F Sbjct: 121 KFPAKEKFYADLQQYLEKEHDKSNPILIMGDMNISPSDLDIGIGDENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R +Q+L + G D+ R + T + +S++DY + + N+G+RIDHI++S + Sbjct: 181 PEERAWYQRLYDYGLEDSFRKLNPTANDKFSWFDYRSKGFDDNRGLRIDHILVSQKLAER 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262 I R KPSDH P+ Sbjct: 241 CVDVGIALDIRAMEKPSDHAPIWAEFK 267 >gi|251773491|gb|EES54039.1| Exodeoxyribonuclease III [Leptospirillum ferrodiazotrophum] Length = 259 Score = 206 bits (523), Expect = 4e-51, Method: Composition-based stats. Identities = 91/259 (35%), Positives = 134/259 (51%), Gaps = 5/259 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + VATWNVNS+ R+ + WI +PDI+CLQETK D FP E + Y + GQ Sbjct: 1 MRVATWNVNSLPVRLPQVLDWIDRKSPDILCLQETKVPDSRFPAEPFRERGYDLLFRGQP 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAILS+ + + PG+ LR+ NLY+P+G + + K Sbjct: 61 TYNGVAILSRRPLSDPLRDFPGEPDPECRLLAAT-----AGPLRLFNLYVPNGQDLDTPK 115 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K++W+ R L+ GD+NI+P+ D Y+P+ + R++ Sbjct: 116 YRYKLAWLDRLAALLDDERRRHPFLVLTGDFNIVPEDRDAYDPVALRGQIFLSPPEREAL 175 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 ++ N+GF DA RA H +S+WDY + +N G+RID I+++ L SA ID Sbjct: 176 ARIMNLGFRDAFRALHPDPGHFSWWDYRQGMFRRNMGLRIDLILMASSLEPALTSAEIDR 235 Query: 244 KPRGWTKPSDHTPVIVSLD 262 + R +PSDH PV V D Sbjct: 236 EVRKNERPSDHAPVFVDFD 254 >gi|95930349|ref|ZP_01313086.1| exodeoxyribonuclease III [Desulfuromonas acetoxidans DSM 684] gi|95133601|gb|EAT15263.1| exodeoxyribonuclease III [Desulfuromonas acetoxidans DSM 684] Length = 270 Score = 206 bits (523), Expect = 4e-51, Method: Composition-based stats. Identities = 77/270 (28%), Positives = 124/270 (45%), Gaps = 10/270 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++NVN +RAR H + A I PD++ LQETK D FP ++SL Y + GQK Sbjct: 1 MKIISFNVNGLRARHHQVKAVIDTYQPDVLALQETKVHDDQFPLAEVESLGYEVRYYGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122 + GVA+LS+ P+++ DD + Q R I + Q + + N Y P G + Sbjct: 61 GHYGVALLSRQAPVDVQYGFVDDDDEAQRRLIVGRYAFGDQMVTVVNGYFPQGENRSHAV 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW------ENDACFT 176 K+ K + + + + L+ GD N+ P D + +CF Sbjct: 121 KFPAKEKFYRDLRQMLENYEAKNDALLVVGDMNVAPLAEDIGIGPDNEKRWLAQGKSCFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKN--KGIRIDHIMLSPEAT 233 E R Q + + G D+ R + +S++DY + + ++ +G+RID I+ S Sbjct: 181 PEERAWLQSVMDWGLHDSFRHCYPDVDDRFSWFDYRSRGFERDPKRGLRIDLILASQALI 240 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 S A ID R KPSDH P+ + Sbjct: 241 SRCQDAGIDYDIRAMEKPSDHCPIWAEFSL 270 >gi|331647243|ref|ZP_08348337.1| exodeoxyribonuclease III [Escherichia coli M605] gi|331044026|gb|EGI16162.1| exodeoxyribonuclease III [Escherichia coli M605] Length = 272 Score = 206 bits (523), Expect = 4e-51, Method: Composition-based stats. Identities = 79/268 (29%), Positives = 125/268 (46%), Gaps = 8/268 (2%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + ++N+N +RAR H L A ++++ PD+I LQETK D FP E + L Y++ G Sbjct: 3 ATMKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHG 62 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 QK + GVA+L+K PI + PGDD + Q R I A + + N Y P G Sbjct: 63 QKGHYGVALLTKETPISVRRGFPGDDEEAQRRIIMAEIPSPLGNITVINGYFPQGESRDH 122 Query: 122 TK-YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDAC 174 + K + + + L+ E P++ GD NI P + + Sbjct: 123 PIKFPAKAQFYQNLQNYLETELKRENPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCS 182 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 F E R+ ++L + G D R + +S++DY + + N+G+RID ++ S Sbjct: 183 FLPEEREWMERLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLA 242 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSL 261 ID + R KPSDH PV + Sbjct: 243 ECCVETGIDYEIRSMEKPSDHAPVWATF 270 >gi|311279891|ref|YP_003942122.1| exodeoxyribonuclease III [Enterobacter cloacae SCF1] gi|308749086|gb|ADO48838.1| exodeoxyribonuclease III [Enterobacter cloacae SCF1] Length = 268 Score = 206 bits (523), Expect = 4e-51, Method: Composition-based stats. Identities = 81/267 (30%), Positives = 123/267 (46%), Gaps = 8/267 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A ++++ PD+I LQETK D FP E + L Y++ GQK Sbjct: 1 MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEDVAKLGYNVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122 + GVA+L+K P+ + PGD D Q R I A + + N Y P G Sbjct: 61 GHYGVALLTKATPVSVRRGFPGDGEDAQRRIIMAEIPSAFGNVTVINGYFPQGESRDHPL 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + + + + L E P++ GD NI P D + F Sbjct: 121 KFPAKELFYQNLQNYLNTELNNENPVLIMGDMNISPTDLDIGIGDDNRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +L + G D R H +S++DY + + N+G+RID ++ S Sbjct: 181 PEEREWMARLLDWGLVDTFRHAHPDTQDKFSWFDYRSKGFDDNRGLRIDLLLASSPLAQR 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262 ID + R KPSDH PV + Sbjct: 241 CVETGIDYEIRSMEKPSDHAPVWATFK 267 >gi|149278560|ref|ZP_01884696.1| exodeoxyribonuclease III (exonuclease III) [Pedobacter sp. BAL39] gi|149230555|gb|EDM35938.1| exodeoxyribonuclease III (exonuclease III) [Pedobacter sp. BAL39] Length = 260 Score = 206 bits (523), Expect = 4e-51, Method: Composition-based stats. Identities = 96/261 (36%), Positives = 144/261 (55%), Gaps = 3/261 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+N+N + R+ L W+ + PD++CLQE K E FP + Y G+K Sbjct: 1 MKIATYNINGVNGRLPVLLRWLAKAQPDVVCLQELKCESYRFPVTAINDAGYQAIWRGEK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 S+NGVAILSK + E+ T LPG+D Q T + IG +YLP+GNP K Sbjct: 61 SWNGVAILSKSEIRELRTDLPGEDASYQHS---RYIEGFTFGMVIGCIYLPNGNPYPGPK 117 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 +D K+ W R L P++ GDYN++P D Y P + ++A F E R+++ Sbjct: 118 FDYKLRWFSRLADHGRTLLNTGLPVMLVGDYNVMPTELDTYKPEKYLDNALFREESRKAY 177 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 L G+ DAIR + +Y+FWDY +++ +N G+R+DH +L+P L A++D Sbjct: 178 ADLVAQGWIDAIRELYPGERIYTFWDYMRNAYGRNAGLRLDHFLLNPVLAGRLKVAKVDK 237 Query: 244 KPRGWTKPSDHTPVIVSLDIP 264 + RGW K SDH PV + L +P Sbjct: 238 EVRGWEKASDHAPVWIELSMP 258 >gi|237731238|ref|ZP_04561719.1| exonuclease III [Citrobacter sp. 30_2] gi|226906777|gb|EEH92695.1| exonuclease III [Citrobacter sp. 30_2] Length = 272 Score = 206 bits (523), Expect = 4e-51, Method: Composition-based stats. Identities = 81/270 (30%), Positives = 129/270 (47%), Gaps = 8/270 (2%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + ++N+N +RAR H LAA ++++ PD+I LQETK D FP E + L Y++ G Sbjct: 3 ATMKFVSFNINGLRARPHQLAAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHG 62 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 QK + GVA+L+K PI + PGDD + Q R I A ++ + N Y P G Sbjct: 63 QKGHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSPLGSITVINGYFPQGESRDH 122 Query: 122 -TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDAC 174 TK+ K ++ + + L+ + P++ GD NI P + + Sbjct: 123 ETKFPAKAAFYQNLQNYLETELKRDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCS 182 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 F E R+ ++L G D R + +S++DY + + N+G+RID ++ S Sbjct: 183 FLPEEREWMERLLGWGLVDTYRHANPEKNDQFSWFDYRSKGFDDNRGLRIDLLLASNPLA 242 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 ID + R KPSDH PV + Sbjct: 243 ERCEETGIDYEIRSMEKPSDHAPVWAKFRV 272 >gi|261210504|ref|ZP_05924797.1| exodeoxyribonuclease III [Vibrio sp. RC341] gi|260840289|gb|EEX66860.1| exodeoxyribonuclease III [Vibrio sp. RC341] Length = 268 Score = 206 bits (523), Expect = 4e-51, Method: Composition-based stats. Identities = 77/268 (28%), Positives = 127/268 (47%), Gaps = 9/268 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +RAR+H L A I ++ PD+I LQE K D FP E ++++ Y + GQK Sbjct: 1 MKIISFNINGLRARLHQLQAIIDKHQPDVIGLQEIKVHDDAFPREEVEAMGYQVYFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121 ++ GVAIL K P+E++ P ++ + + + N Y P G+ + Sbjct: 61 AHYGVAILCKQTPLEVIKGFPTDNEEHQKRMIMATFADQEGNKTTVLNGYFPQGDNVEHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175 TK+ K + + + + + E L+ GD NI P + F Sbjct: 121 TKFPYKRQFYRDLMTYLREHRSNTERLVVMGDINISPIDLDIGIGEANRKRWLQTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R+ Q L + G D R H + +S++DY + + N+G+RID I+ +P Sbjct: 181 QPEEREWLQTLLDWGLVDTFRQLHPNVNDQFSWFDYRSRGFEDNRGLRIDVILATPSLAE 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 A ID + RG KPSDH P+ + Sbjct: 241 TCQEAGIDYELRGIDKPSDHAPIWATFK 268 >gi|87123786|ref|ZP_01079636.1| Exodeoxyribonuclease III xth [Synechococcus sp. RS9917] gi|86168355|gb|EAQ69612.1| Exodeoxyribonuclease III xth [Synechococcus sp. RS9917] Length = 276 Score = 206 bits (523), Expect = 4e-51, Method: Composition-based stats. Identities = 85/278 (30%), Positives = 138/278 (49%), Gaps = 5/278 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A+WNVNS+R R+ ++ W+ PD++CLQETK D FP E S + GQK Sbjct: 1 MRIASWNVNSLRTRLDHVLNWLNAAQPDLLCLQETKVADPQFPLEAFTSRGWQATVHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT---QTLRIGNLYLPHGNPIT 120 +YNGVA++S+ ++ G+ D +A + + + +R+ NLY+P+G+ + Sbjct: 61 AYNGVALVSRTPLEDVRLGFSGELADEEAEELGTQKRVISALLDGVRVVNLYVPNGSSLK 120 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 KY K+ W+ R+ + E EPL GD+NI + D ++P + R Sbjct: 121 LEKYPYKLRWLACLQRYLQRPQERGEPLCVVGDFNIALESRDMHDPDRLTGGIMASEPER 180 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + + D R +S+WDY + +W +++G RIDHI L E + Sbjct: 181 AALKAALGDTLHDVFRVFEPDTGHWSWWDYRSGAWDRDRGWRIDHIYLCDELLARARGCL 240 Query: 241 IDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278 I + RG +PSDH PV+ L P ++ DS N+ Sbjct: 241 IHKQERGRDQPSDHAPVVADLCWP--PEEDGDSDEWNL 276 >gi|324007120|gb|EGB76339.1| exodeoxyribonuclease III [Escherichia coli MS 57-2] Length = 272 Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats. Identities = 78/268 (29%), Positives = 124/268 (46%), Gaps = 8/268 (2%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + ++N+N +RAR H L A ++++ PD+I LQETK D FP E + L Y++ G Sbjct: 3 ATMKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVTKLGYNVFYHG 62 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 QK + GVA+L+K PI + PGD + Q R I A + + N Y P G Sbjct: 63 QKGHYGVALLTKETPIAVRRGFPGDGEEAQRRIIMAEIPSPLGNITVINGYFPQGESRDH 122 Query: 122 TK-YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDAC 174 + K + + + L+ E P++ GD NI P + + Sbjct: 123 PIKFPAKAQFYQNLQNYLETELKRENPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCS 182 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 F E R+ ++L + G D R + +S++DY + + N+G+RID ++ S Sbjct: 183 FLPEEREWMERLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLA 242 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSL 261 ID + R KPSDH PV + Sbjct: 243 ECCVETGIDYEIRSMEKPSDHAPVWATF 270 >gi|16272016|ref|NP_438214.1| exonuclease III [Haemophilus influenzae Rd KW20] gi|145636755|ref|ZP_01792421.1| exodeoxyribonuclease III [Haemophilus influenzae PittHH] gi|260580655|ref|ZP_05848482.1| exodeoxyribonuclease III [Haemophilus influenzae RdAW] gi|1169570|sp|P44318|EX3_HAEIN RecName: Full=Exodeoxyribonuclease III; Short=EXO III; Short=Exonuclease III gi|1572987|gb|AAC21719.1| exodeoxyribonuclease III (xthA) [Haemophilus influenzae Rd KW20] gi|145270053|gb|EDK09990.1| exodeoxyribonuclease III [Haemophilus influenzae PittHH] gi|260092717|gb|EEW76653.1| exodeoxyribonuclease III [Haemophilus influenzae RdAW] Length = 267 Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats. Identities = 82/267 (30%), Positives = 128/267 (47%), Gaps = 8/267 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A I++ PD+I LQE K D+ FP+E ++L YH+ GQK Sbjct: 1 MKFISFNINGLRARPHQLEAIIEKYQPDVIGLQEIKVADEAFPYEITENLGYHVFHHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122 + GVA+L+K +P I P D+ D Q R I A L + N Y P G T Sbjct: 61 GHYGVALLTKQEPKVIRRGFPTDNEDAQKRIIMADLETEFGLLTVINGYFPQGESRAHET 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + ++ + + P++ GD NI P + + F Sbjct: 121 KFPAKEKFYADLQQYLEKEHDKSNPILIMGDMNISPSDLDIGIGDENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R +Q+L + G D+ R + T + +S++DY + + N+G+RIDHI++S + Sbjct: 181 PEERAWYQRLYDYGLEDSFRKLNPTANDKFSWFDYRSKGFDDNRGLRIDHILVSQKLAER 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262 I R KPSDH P+ Sbjct: 241 CVDVGIALDIRAMEKPSDHAPIWAEFK 267 >gi|331014335|gb|EGH94391.1| exonuclease III [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 270 Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats. Identities = 90/269 (33%), Positives = 136/269 (50%), Gaps = 11/269 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +RAR H LAA I ++ PD+I LQETK D+ FP +++L YH+ GQK Sbjct: 1 MKIVSFNINGLRARPHQLAALIDKHQPDVIGLQETKVSDEQFPLADVEALGYHVHFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122 + GVA+LS+ P+ + GDD + Q RFI T+ N Q + I N Y P G Sbjct: 61 GHYGVALLSRNPPLALHKGFEGDDEESQKRFIWGTYADSNGQPVTIMNGYFPQGESRDHP 120 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175 K+ K + + + E+PLI GD NI PQ D + F Sbjct: 121 TKFPAKQRFYENLQALLEGQFSNEQPLIVMGDVNISPQDCDIGIGADNAKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232 E R+ ++L+N G D+ R + +S++DY + + +G+RID IM S Sbjct: 181 LPEEREWMERLKNWGLVDSFRYLYPEVSDRFSWFDYRSRGFEDEPKRGLRIDLIMTSTGL 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + +A +D RG KPSDH P+ + L Sbjct: 241 QPRIKAAGVDYDLRGMEKPSDHAPIWLEL 269 >gi|297537413|ref|YP_003673182.1| exodeoxyribonuclease III Xth [Methylotenera sp. 301] gi|297256760|gb|ADI28605.1| exodeoxyribonuclease III Xth [Methylotenera sp. 301] Length = 260 Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats. Identities = 90/259 (34%), Positives = 140/259 (54%), Gaps = 5/259 (1%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 +ATWNVNS+ R+ ++ W+++N D++CLQETK ED FP+ L+ Y+ GQ Sbjct: 5 TFKLATWNVNSLNVRLQHVLDWLRDNPIDVLCLQETKQEDSKFPYTELKEAGYNAIHSGQ 64 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K+YNGVAILS + E+ + + + +R+ +Y+ +G + S Sbjct: 65 KTYNGVAILSTHDMTEVEHGIADFEDGQKRVISATING-----VRVVCVYIVNGQAVDSE 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 KY+ K+ W+ + + L+ L+ GDYNI P+ DC++P W + + R+ Sbjct: 120 KYEYKMRWLTALNTWLAGELKKYPKLVVLGDYNIAPEDRDCHDPAAWLGQILVSPQEREH 179 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 FQKL +G D+ R +S+WDY + +N G+RIDHI++S S +A ID Sbjct: 180 FQKLLQLGLHDSFRLFEQAEKSFSWWDYRMMGFRRNFGMRIDHILVSDALKSACIAATID 239 Query: 243 TKPRGWTKPSDHTPVIVSL 261 PR +PSDHTPVI+ L Sbjct: 240 KAPRKLERPSDHTPVILEL 258 >gi|326775686|ref|ZP_08234951.1| exodeoxyribonuclease III Xth [Streptomyces cf. griseus XylebKG-1] gi|326656019|gb|EGE40865.1| exodeoxyribonuclease III Xth [Streptomyces cf. griseus XylebKG-1] Length = 259 Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats. Identities = 77/260 (29%), Positives = 127/260 (48%), Gaps = 1/260 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+NVNSI AR+ L AW++ + D++C+QETK + FP E L+ Y Sbjct: 1 MRIATYNVNSITARLPRLLAWLESSGTDVLCVQETKCTAEQFPAEALREAGYASAVNATG 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVA+LS+ ++VT LP + A LR+ ++Y+P+G + Sbjct: 61 RWNGVALLSRVGLSDVVTGLPDGPEYEGVQEPRAISATCGP-LRLWSVYVPNGREVEHAH 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W++ + + P GD+N+ P D ++P ++E T R + Sbjct: 120 YAYKLRWLEALRKAVAADAAKALPFAVLGDFNVAPTDEDVWDPALFEGATHVTPAERVAL 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 L+ G ++ Y+FWDY + KNKG+RID + T+ + + +D Sbjct: 180 AALEAEGLSEVHPRPLKYDRAYTFWDYRELRFPKNKGMRIDLTFGNAPFTAAVKDSYVDR 239 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 + R SDH PV+V LD+ Sbjct: 240 EERKGKGASDHAPVVVDLDL 259 >gi|312796736|ref|YP_004029658.1| Exodeoxyribonuclease III [Burkholderia rhizoxinica HKI 454] gi|312168511|emb|CBW75514.1| Exodeoxyribonuclease III (EC 3.1.11.2) [Burkholderia rhizoxinica HKI 454] Length = 259 Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats. Identities = 81/259 (31%), Positives = 133/259 (51%), Gaps = 1/259 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+NS++ R+ ++ W+ + D++CLQE K D +P L++ Y GQK Sbjct: 1 MKIATWNINSLKVRLQHVIDWLAMSRVDVLCLQELKLPDDKYPRAALEAAGYRSWFSGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAIL + + + + ++ + +R+ + Y P+G + K Sbjct: 61 TYNGVAILVRDG-LPVDEAVVIRNIPGFDDLQQRLIAATIDGVRVVSAYFPNGQAPGTDK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+SW+ + + + GDYNI P+ D ++P WE + E R +F Sbjct: 120 FAYKLSWLAALREWVAAEMRAHPQFALTGDYNIAPEDRDVHDPQAWEGQNLVSPEERDAF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + L +G DA R +S+WDY ++ +N G+RIDHI+LSP + ID Sbjct: 180 RSLVELGLVDAFRCFEQPDKSFSWWDYRMLAFRRNAGLRIDHILLSPSLAQCCSACEIDK 239 Query: 244 KPRGWTKPSDHTPVIVSLD 262 PR W +PSDH PVI +L+ Sbjct: 240 TPRRWDQPSDHAPVIATLE 258 >gi|307294591|ref|ZP_07574433.1| exodeoxyribonuclease III Xth [Sphingobium chlorophenolicum L-1] gi|306879065|gb|EFN10283.1| exodeoxyribonuclease III Xth [Sphingobium chlorophenolicum L-1] Length = 256 Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats. Identities = 103/259 (39%), Positives = 155/259 (59%), Gaps = 5/259 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+N+N I+AR+ L W+ E PDI CLQE KT D+ FP + ++ + Y GQK Sbjct: 1 MRIATFNINGIKARLPRLLEWLDETRPDIACLQEIKTSDETFPVKDIEDVGYGAIWHGQK 60 Query: 64 SYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 +NGVAIL++ P+E+ L G+ D +R++EA LR+ ++YLP+GNP Sbjct: 61 GFNGVAILARGETPVEVRRGLEGEPEDEHSRYLEADVKG----LRVASIYLPNGNPQPGP 116 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K+D K+ W+KR A++ E P I AGDYN+IP+ D Y+ +DA E R + Sbjct: 117 KFDYKLRWMKRLRARATEIWAEEVPAILAGDYNVIPRDKDVYSVKAMADDALMQPESRAA 176 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 +++L G+TDAI + H ++++WDY ++W ++ G RIDH++LSP A L A++D Sbjct: 177 YRRLLGDGWTDAIASRHPAGGVWTYWDYQMNAWPRDAGFRIDHLLLSPAAADRLIDAQVD 236 Query: 243 TKPRGWTKPSDHTPVIVSL 261 RG K SDH P V L Sbjct: 237 KDFRGREKASDHAPTWVEL 255 >gi|331653152|ref|ZP_08354157.1| exodeoxyribonuclease III [Escherichia coli M718] gi|331049250|gb|EGI21322.1| exodeoxyribonuclease III [Escherichia coli M718] Length = 272 Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats. Identities = 79/268 (29%), Positives = 125/268 (46%), Gaps = 8/268 (2%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + ++N+N +RAR H L A ++++ PD+I LQETK D FP E + L Y++ G Sbjct: 3 ATMKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHG 62 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 QK + GVA+L+K PI + PGDD + Q R I A + + N Y P G Sbjct: 63 QKGHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMADIPSPLGNVTVINGYFPQGESRDH 122 Query: 122 TK-YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDAC 174 + K + + + L+ E P++ GD NI P + + Sbjct: 123 PIKFPAKAQFYQNLQNYLETELKRENPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCS 182 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 F E R+ ++L + G D R + +S++DY + + N+G+RID ++ S Sbjct: 183 FLPEEREWMERLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLA 242 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSL 261 ID + R KPSDH PV + Sbjct: 243 ECCVETGIDYEIRSMEKPSDHAPVWATF 270 >gi|118464012|ref|YP_883854.1| exodeoxyribonuclease III [Mycobacterium avium 104] gi|118165299|gb|ABK66196.1| exodeoxyribonuclease III [Mycobacterium avium 104] Length = 272 Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats. Identities = 76/264 (28%), Positives = 122/264 (46%), Gaps = 7/264 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSIR+R+ + W+ + D++ +QETK D FP L Y + G Sbjct: 1 MRLATWNVNSIRSRLPRVLDWLARTDVDVLAMQETKCADGQFPTLPFFELGYEVAHVGFN 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQAR-----FIEATFTINTQTLRIGNLYLPHGNP 118 +NGVAI S+ ++ G +RI +LY+P+G Sbjct: 61 QWNGVAIASRVGLDDVRVGFEGQPSWSGKPEVAAAAEARALAATCAGVRIWSLYVPNGRA 120 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEE--PLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + Y K+ W+ A+ L + + AGD+NI PQ D ++ + + Sbjct: 121 VGDPHYAYKLDWLAALRDSAAGWLREDPAAQIALAGDWNIAPQDDDVWSMEFFAGATHVS 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 R++F + + F D +R +Y++WDY A + K +G+RID I+ SP + Sbjct: 181 EPERRAFNAILDAQFADLVRPFAPGPGVYTYWDYTALRFPKRQGMRIDFILGSPALARRV 240 Query: 237 HSARIDTKPRGWTKPSDHTPVIVS 260 A+ID + R SDH PV+V Sbjct: 241 THAQIDREERKGKGASDHAPVLVD 264 >gi|119715318|ref|YP_922283.1| exodeoxyribonuclease III [Nocardioides sp. JS614] gi|119535979|gb|ABL80596.1| Exodeoxyribonuclease III [Nocardioides sp. JS614] Length = 262 Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats. Identities = 75/263 (28%), Positives = 128/263 (48%), Gaps = 7/263 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+R+RI + A++ + D++ LQETK + P +++ Y + G Sbjct: 1 MRIATWNVNSLRSRIDRVEAFLDRHEVDVLALQETKAREDQLPLMGIEARGYEVAVAGAN 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-----TQTLRIGNLYLPHGNP 118 +NGVA++S+ ++ PG + A +RI +LY+P+G Sbjct: 61 QWNGVAVISRVGLSDVAVGFPGQPGWAKDVQRAAETESRAIGATCGGVRIWSLYVPNGRK 120 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 Y K+ W+ R + + ++ + GD+NI P D ++ + T Sbjct: 121 PDDPHYVYKLDWLAR--LRDAAQAWRDQDVALVGDWNIAPTDEDVFDMAQFARSTHVTPP 178 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R +FQ G+ D +R +Y++WDYY + +N+G+RID ++ SP + + Sbjct: 179 ERAAFQAFLEDGYVDVVRPHAPGPEVYTYWDYYRQRYERNRGMRIDFVLGSPSLAARVTG 238 Query: 239 ARIDTKPRGWTKPSDHTPVIVSL 261 A ID + R T SDH PV+V L Sbjct: 239 AFIDREERAGTGASDHAPVVVDL 261 >gi|290475444|ref|YP_003468332.1| exonuclease III [Xenorhabdus bovienii SS-2004] gi|289174765|emb|CBJ81566.1| exonuclease III [Xenorhabdus bovienii SS-2004] Length = 268 Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats. Identities = 86/266 (32%), Positives = 128/266 (48%), Gaps = 8/266 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H LAA ++++ PD+I LQETK D+ FP E + L YHI GQK Sbjct: 1 MKFVSFNINGLRARPHQLAAIVEQHQPDVIGLQETKVHDEMFPLEEVSKLGYHIFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122 S+ GVA+L++ QP+ + P DD D Q R I A + I N Y P G Sbjct: 61 SHYGVALLTRQQPVTVRKGFPTDDDDAQRRIIMADIETPQGLMTIINGYFPQGESREHPV 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE------NDACFT 176 K+ K + + R+ + + ++ GD NI P D + F Sbjct: 121 KFPAKEKFYQDLNRYLEKNQSPDSHILIMGDMNISPTDLDIGIGENNQKRWLKTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +L++ G D RA H +S++DY + + N+G+RID ++ S Sbjct: 181 PEEREWMGRLKDWGLIDTFRAQHPEASDQFSWFDYRSKGFDDNRGLRIDLLLASRPLAER 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 S+ ID R KPSDH PV Sbjct: 241 CLSSGIDYAIRSMEKPSDHAPVWAEF 266 >gi|167856041|ref|ZP_02478785.1| exodeoxyribonuclease III [Haemophilus parasuis 29755] gi|219870568|ref|YP_002474943.1| exonuclease III [Haemophilus parasuis SH0165] gi|167852836|gb|EDS24106.1| exodeoxyribonuclease III [Haemophilus parasuis 29755] gi|219690772|gb|ACL31995.1| exonuclease III [Haemophilus parasuis SH0165] Length = 267 Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats. Identities = 86/267 (32%), Positives = 130/267 (48%), Gaps = 8/267 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A I+++ PD+I LQE K D++FP++ + L YH+ GQK Sbjct: 1 MKFISFNINGLRARPHQLEALIEKHQPDVIGLQEIKVADEDFPYDLVNHLGYHVFHHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122 + GVA+L+K QP+ + P D+ D Q R I A TL + N Y P G + T Sbjct: 61 GHYGVALLTKNQPLAVRKGFPTDNADAQKRMIMADLETPFGTLTVLNGYFPQGENRSHET 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACFT 176 K+ K + R+ L+ E P++ GD NI P D + + F Sbjct: 121 KFPAKEKFYADLQRYLETELKPENPIVIMGDMNISPTDLDIGLGEVNRKRWLRDGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +L G D RA + T +S++DY + + N+G+RID ++ S Sbjct: 181 PEEREWLGRLHGYGLVDTFRAMNPTAEDKFSWFDYRSKGFDDNRGLRIDLVLASTPLAER 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262 ID + R KPSDH PV Sbjct: 241 CVETGIDLEIRAMDKPSDHAPVWAVFK 267 >gi|332039522|gb|EGI75929.1| exodeoxyribonuclease III Xth [Hylemonella gracilis ATCC 19624] Length = 268 Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats. Identities = 91/265 (34%), Positives = 126/265 (47%), Gaps = 7/265 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNP-----DIICLQETKTEDKNFPFETLQSLNYHIE 58 + +ATWNVNS+ R+ + W+ D++ LQE K D FP ++ Y E Sbjct: 1 MKLATWNVNSLGVRLPQVLDWLAAQAAGGAPIDVLALQELKLTDDKFPHAEFEAAGYRAE 60 Query: 59 TCGQKSYNGVAILSKY--QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 GQK+YNGVA++S+ + VT D QAR I AT LRI N Y +G Sbjct: 61 AYGQKTYNGVALISRLSLPALRDVTRNITGFEDEQARVIVATLDTPQGPLRIVNGYFVNG 120 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 S K+ K+ W+ L L+ GDYNI P D Y+P T Sbjct: 121 QEPGSEKFAYKMRWMDALRAQVQAELATHARLVLLGDYNITPDDRDSYDPEGLRETIHHT 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 + R+ F+ L +G DA R YS+WDY + KN+G+RIDHI++S + Sbjct: 181 TQEREQFKALLALGLHDAYRMFEQPEKSYSWWDYRMLGFQKNRGLRIDHILVSEALKPAV 240 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSL 261 ID PR +PSDH PV++ L Sbjct: 241 QGCTIDRLPRKNKQPSDHAPVLLEL 265 >gi|300716986|ref|YP_003741789.1| Exodeoxyribonuclease III [Erwinia billingiae Eb661] gi|299062822|emb|CAX59942.1| Exodeoxyribonuclease III [Erwinia billingiae Eb661] Length = 272 Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats. Identities = 82/272 (30%), Positives = 129/272 (47%), Gaps = 8/272 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H LAA I+++ PD+I LQETK D FP E + L YH+ GQK Sbjct: 1 MKFVSFNINGLRARPHQLAAIIEQHQPDVIGLQETKVHDDMFPLEEVSKLGYHVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122 + GVA+L+K +P+ + GDD + Q R I A TL + N Y P G Sbjct: 61 GHYGVALLTKDEPLAVRRGFAGDDEESQRRMIMADIATPVGTLTVLNGYFPQGESRDHPT 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + + + + P++ GD NI D + F Sbjct: 121 KFPAKEKFYRDLQSYLENDQKPTNPVVIMGDMNISATDLDIGIGEDNRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +L G D RA + + + +S++DY + + N+G+RID ++ S + Sbjct: 181 PEEREWMDRLMGWGLVDTWRAENAEANDRFSWFDYRSKGFDDNRGLRIDLVLASQPLAAR 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDIPEPR 267 + ID R KPSDH P+ ++ E + Sbjct: 241 CVATGIDYDIRSMEKPSDHAPIWAQFNLDEAK 272 >gi|148240155|ref|YP_001225542.1| exodeoxyribonuclease III [Synechococcus sp. WH 7803] gi|147848694|emb|CAK24245.1| Exodeoxyribonuclease III [Synechococcus sp. WH 7803] Length = 276 Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats. Identities = 86/264 (32%), Positives = 137/264 (51%), Gaps = 4/264 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A+WNVNS+R R+ ++ W+ N D++ LQETK +D FP + Q YH+ GQK Sbjct: 1 MRIASWNVNSVRTRLEHVLGWLDRNTIDVLALQETKVDDPLFPLKPFQERGYHLSIHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN----TQTLRIGNLYLPHGNPI 119 SYNGVA++S+ ++ G+ T +R+ NLY+P+G+ + Sbjct: 61 SYNGVALISRQPLEDVRLGFTGELPGDADAEALGTQKRVISALVDGIRVVNLYVPNGSSL 120 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 S KY K++W+ R+ +EPL GD+NI P+ D ++P + Sbjct: 121 DSEKYSYKLNWMGCLERYLRAAETRDEPLCVVGDFNIGPEARDLHDPERLTGGIMASEAE 180 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R++ ++ DA R +S+WDY + +W+++ G RIDHI +S + L S Sbjct: 181 RKALVQVLGSNLGDAFRLFEPGSGHWSWWDYRSGAWNRDSGWRIDHIYISSDLQELARSC 240 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 ID + RG +PSDH PV+V L Sbjct: 241 SIDKEERGREQPSDHAPVVVDLAW 264 >gi|262274649|ref|ZP_06052460.1| exodeoxyribonuclease III [Grimontia hollisae CIP 101886] gi|262221212|gb|EEY72526.1| exodeoxyribonuclease III [Grimontia hollisae CIP 101886] Length = 300 Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats. Identities = 81/270 (30%), Positives = 130/270 (48%), Gaps = 9/270 (3%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 S + V ++N+N +RAR+H L A I+++ PD+I LQE K D+ FP E ++++ Y + G Sbjct: 31 SSMKVISFNINGLRARLHQLQALIEKHQPDVIGLQEIKVHDEAFPVEDVEAMGYKVYFHG 90 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLD-VQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 QK++ GVA+L K P+ + P D D + + + + + N Y P G I Sbjct: 91 QKAHYGVAMLCKQTPVRVQKGFPTDGEDAQRRMIMATFKQEDGSEVTVLNGYFPQGENIE 150 Query: 121 S-TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDA 173 TK+ K + + + + + +E LI GD NI P D + Sbjct: 151 HETKFPAKRKFYQDLMTYLNASHTNDEKLIVMGDINISPLDLDIGIGEVNRKRWLKTGKC 210 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 F E R+ L N GF D R + + +S++DY + + N+G+RID I+ +P Sbjct: 211 SFQPEEREMLATLMNWGFVDTFRQQYPDVDNKFSWFDYRSRGFDDNRGLRIDVILATPSL 270 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 ID + RG KPSDH P+ + Sbjct: 271 AVDCIDTGIDYELRGIEKPSDHAPIWATFK 300 >gi|172038905|ref|YP_001805406.1| exodeoxyribonuclease III [Cyanothece sp. ATCC 51142] gi|171700359|gb|ACB53340.1| exodeoxyribonuclease III [Cyanothece sp. ATCC 51142] Length = 262 Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats. Identities = 90/262 (34%), Positives = 140/262 (53%), Gaps = 4/262 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSIR R ++ W+ N+ D++CLQETK DK+FP E + L YH+ GQK Sbjct: 1 MKIATWNVNSIRTRQSHVINWLSNNSIDVLCLQETKVIDKDFPREPFEELGYHVYIYGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT---QTLRIGNLYLPHGNPIT 120 +YNGVAI S+ +I+ + A+ + + + +RI NLY+P+G + Sbjct: 61 AYNGVAIFSRQPMTDIIMGFTPMVGEAIAQQFDEQKRVISGVIDGIRIINLYVPNGAAVG 120 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPL-IFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 S KY K+ W + + ++ E GD+NI + D YN EN + Sbjct: 121 SEKYQYKLQWFQVLKVYLDNLIQKESHELCICGDFNIALEDKDIYNSKGKENHIMSSPLE 180 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R++ + + +G DA R +S+WDY + + +N+G RIDH+ L+ + + Sbjct: 181 REALENILEIGLQDAFRKFTTEGGHFSWWDYRSGGFQRNRGWRIDHLYLTNKLYGKAINC 240 Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261 ID +PR KPSDHTPVI+ + Sbjct: 241 TIDIEPRKQEKPSDHTPVILEI 262 >gi|330810622|ref|YP_004355084.1| exodeoxyribonuclease III [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327378730|gb|AEA70080.1| exodeoxyribonuclease III [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 270 Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats. Identities = 88/269 (32%), Positives = 134/269 (49%), Gaps = 11/269 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +RAR H LAA I+++ PD+I LQETK D+ FP +Q+L YH+ GQK Sbjct: 1 MKIVSFNINGLRARPHQLAALIEKHQPDVIGLQETKVHDEQFPLAEVQALGYHVHYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122 + GVA+LS+ P+ + GDD D Q RFI TF N + I N Y P G Sbjct: 61 GHYGVALLSRQAPLSLYKGFEGDDEDAQRRFIWGTFADANGVPVTIMNGYFPQGESRDHP 120 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE------NDACF 175 K+ K + + R ++P++ GD NI P+ D F Sbjct: 121 TKFPAKERFYSDLQQLLESRFSNDQPVVVMGDVNISPEDCDIGIGPDNMKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232 E R+ +L+N G D+ R + +S++DY + + +G+RID I+ S Sbjct: 181 LPEEREWMARLKNWGLVDSFRHLNPDVTDRFSWFDYRSRGFEDEPKRGLRIDLILTSHGL 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + A +D + RG KPSDH P+ + L Sbjct: 241 LPRVKDAGVDYELRGMEKPSDHAPIWLQL 269 >gi|183599301|ref|ZP_02960794.1| hypothetical protein PROSTU_02765 [Providencia stuartii ATCC 25827] gi|188021535|gb|EDU59575.1| hypothetical protein PROSTU_02765 [Providencia stuartii ATCC 25827] Length = 271 Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats. Identities = 85/268 (31%), Positives = 131/268 (48%), Gaps = 8/268 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H LAA I ++ P++I LQETK D+ FP++ + L YH+ GQK Sbjct: 1 MKFISFNINGLRARPHQLAAIIDKHQPEVIGLQETKVHDEMFPYDDVSKLGYHVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122 ++ GVA+L+K +P+ + P DD D Q R I A N L + N Y P G Sbjct: 61 AHYGVALLTKNKPVAVRKGFPTDDDDAQRRIIMADIETNHGLLTVVNGYFPQGESREHPV 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + + + + + L+ GD NI P + F Sbjct: 121 KFPAKEKFYQDLQDYITSTQTPQSQLLIMGDMNISPTDLDIGIGEANRKRWLKTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R ++L N G D RA + YS++DY + + N+G+RID ++ S ++ Sbjct: 181 PEERAWMERLLNWGLVDTYRAMNPDVDDCYSWFDYRSKGFDDNRGLRIDLLLASTALSTR 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + ID + RG KPSDH PV D+ Sbjct: 241 CVATGIDYEIRGMEKPSDHAPVWAEFDL 268 >gi|118594091|ref|ZP_01551438.1| Exodeoxyribonuclease III:Exodeoxyribonuclease III xth [Methylophilales bacterium HTCC2181] gi|118439869|gb|EAV46496.1| Exodeoxyribonuclease III:Exodeoxyribonuclease III xth [Methylophilales bacterium HTCC2181] Length = 260 Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats. Identities = 87/259 (33%), Positives = 139/259 (53%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +ATWNVNS+ R+ ++ W+K +NPDI+CLQETK + F E S+ Y GQ Sbjct: 1 MTKIATWNVNSLNVRLEHVIDWVKIHNPDILCLQETKQTNDKFSHEAFDSIGYKSYHNGQ 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K+YNGVAI+S + + + +PG + + + + + + Y+P+G + S Sbjct: 61 KTYNGVAIISNKELQNVGSDIPGFSDPQKRIIHGLYPSRSLGLIHVVSAYVPNGQSLDSE 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K+ K+SW++ F + + I GD+NI P+ DC++P W+ + + R Sbjct: 121 KFKYKVSWLEAFNTWVKSSYGKSDHHILTGDFNIAPRDIDCHDPEAWKGNILVSQIERDL 180 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F + ++GF D+ R + +S+WDY + +N G+RIDHI+ S L +A ID Sbjct: 181 FDAIIDIGFDDSFRVLNKDIQKFSWWDYRMAGFRRNLGMRIDHILTSHSLKENLTTAYID 240 Query: 243 TKPRGWTKPSDHTPVIVSL 261 PR +PSDHTPVI Sbjct: 241 EDPRKLERPSDHTPVITEF 259 >gi|116073418|ref|ZP_01470680.1| Exodeoxyribonuclease III xth [Synechococcus sp. RS9916] gi|116068723|gb|EAU74475.1| Exodeoxyribonuclease III xth [Synechococcus sp. RS9916] Length = 276 Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats. Identities = 91/273 (33%), Positives = 141/273 (51%), Gaps = 5/273 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A+WNVNS+R R+ ++ AW++ + PD++CLQETK D FP +S+ Y + GQK Sbjct: 1 MLIASWNVNSVRTRLDHVLAWLQSHQPDLLCLQETKVADPLFPQTAFESIGYRVSFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT----QTLRIGNLYLPHGNPI 119 SYNGVA++S+ ++ G+ +R+ NLY+P+G+ + Sbjct: 61 SYNGVALISRTPLDDVRCGFIGELPGDLEAGELGEQKRVISALLDGVRVVNLYVPNGSSL 120 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 TS KY K+ W+ R+ E +EPL GD+NI + D ++P + Sbjct: 121 TSDKYPYKLKWLNCLKRYREAAQERDEPLCIVGDFNIGMEARDIHDPERLTGGIMASDAE 180 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R + + G D RA +S+WDY + +W+++ G RIDHI LS + L S Sbjct: 181 RTALNEALGEGMVDVFRAFEPDAGHWSWWDYRSGAWNRDSGWRIDHIYLSEDLLDLARSC 240 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQD 272 I + RG +PSDH PV+V L P P + D Sbjct: 241 VIHKQERGKEQPSDHAPVVVDLCWP-PEDDEDD 272 >gi|33596079|ref|NP_883722.1| putative exodeoxyribonuclease III [Bordetella parapertussis 12822] gi|33601475|ref|NP_889035.1| putative exodeoxyribonuclease III [Bordetella bronchiseptica RB50] gi|33573082|emb|CAE36724.1| putative exodeoxyribonuclease III [Bordetella parapertussis] gi|33575911|emb|CAE32990.1| putative exodeoxyribonuclease III [Bordetella bronchiseptica RB50] Length = 260 Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats. Identities = 87/258 (33%), Positives = 130/258 (50%), Gaps = 1/258 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ R+ + W+ N D +C+QE K D FP + YH GQK Sbjct: 1 MKLATWNVNSLNVRLPQVLDWLAANPVDALCIQELKLTDDKFPLDAFTEAGYHAAWAGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAI+S+ +V + P D Q R + T +R+ Y P+G + S K Sbjct: 61 TYNGVAIISREPGFALVRNNP-RYEDPQQRILAVTLPSPAGDVRVICAYCPNGQSVDSDK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K++W + + + L GDYN+ P D +NP WE + R +F Sbjct: 120 YVYKLAWFDGLRDWLEEEMRTYPRLAILGDYNVAPADADVHNPEKWEGQVLVSEPERAAF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + L ++G TD+ R +S+WDY ++ +N G+RIDH++LS + ID Sbjct: 180 RALLDLGLTDSFRLFEQPEKSFSWWDYRQFAFRRNAGLRIDHVLLSDALKPHCVACVIDK 239 Query: 244 KPRGWTKPSDHTPVIVSL 261 PR +PSDH PVI +L Sbjct: 240 APRANEQPSDHAPVIATL 257 >gi|300917685|ref|ZP_07134334.1| exodeoxyribonuclease III [Escherichia coli MS 115-1] gi|300415086|gb|EFJ98396.1| exodeoxyribonuclease III [Escherichia coli MS 115-1] Length = 272 Score = 205 bits (522), Expect = 5e-51, Method: Composition-based stats. Identities = 78/268 (29%), Positives = 124/268 (46%), Gaps = 8/268 (2%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + ++N+N +RAR H L A ++++ PD+I LQETK D FP E + L Y++ G Sbjct: 3 ATMKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHG 62 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 QK + GVA+L+K PI + PGDD + Q R I A + + N Y P G Sbjct: 63 QKGHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSLLGNVTVINGYFPQGESRDH 122 Query: 122 TK-YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDAC 174 + K + + + L+ + P++ GD NI P + + Sbjct: 123 PIKFPAKAQFYQNLQNYLETELKRDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCS 182 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 F E R+ +L + G D R + +S++DY + + N+G+RID ++ S Sbjct: 183 FLPEEREWMDRLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLA 242 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSL 261 ID + R KPSDH PV + Sbjct: 243 ECCVETGIDYEIRSMEKPSDHAPVWATF 270 >gi|226944961|ref|YP_002800034.1| exonuclease III [Azotobacter vinelandii DJ] gi|226719888|gb|ACO79059.1| exodeoxyribonuclease III [Azotobacter vinelandii DJ] Length = 270 Score = 205 bits (521), Expect = 5e-51, Method: Composition-based stats. Identities = 87/270 (32%), Positives = 133/270 (49%), Gaps = 11/270 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +RAR H L+A I ++ PD+I LQETK D+ FP E + L YH+ GQK Sbjct: 1 MKIVSFNINGLRARPHQLSALIDKHRPDVIGLQETKVADEQFPLEQIGELGYHVHYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122 + GVA+LS+ P+E+ P D D Q RFI + Q + + N Y P G Sbjct: 61 GHYGVALLSRQPPLEVQKGFPDDGEDSQKRFIWGVYADAAGQPVTVMNGYFPQGESRAHP 120 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175 K+ K + R + +PL GD+NI P+ D + F Sbjct: 121 LKFPAKTRFYADLQALLESRFDPGQPLALMGDFNIAPEDSDIGIGAENARRWLRTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKN--KGIRIDHIMLSPEA 232 E R+ +L++ G D+ R H +S++DY + + + +G+RID I+ S Sbjct: 181 LPEEREWMARLKDWGLQDSFRELHPQACDRFSWFDYRSRGFEDDPRRGLRIDLILTSRAL 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 L +A +D + R KPSDH PV + LD Sbjct: 241 RPRLRAADVDYELRAMDKPSDHAPVWLELD 270 >gi|91784274|ref|YP_559480.1| exodeoxyribonuclease III [Burkholderia xenovorans LB400] gi|91688228|gb|ABE31428.1| Exodeoxyribonuclease III [Burkholderia xenovorans LB400] Length = 258 Score = 205 bits (521), Expect = 5e-51, Method: Composition-based stats. Identities = 83/258 (32%), Positives = 131/258 (50%), Gaps = 1/258 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS++ R ++ W++ + D++CLQE K D+ FP L+ Y GQK Sbjct: 1 MKIATWNVNSLKVRQQHVIDWLETSGTDVLCLQELKLPDEKFPRAELEEKGYRSWFAGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGV IL + + + ++ + +RI + Y P+G + K Sbjct: 61 TYNGVGILVRGG-LTVDESSIVRNIPGFEDPQQRVIAATIDGVRIISAYFPNGQAPGTDK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W+ + + + L L GDYNI P+ D ++P WE + E R +F Sbjct: 120 FAYKLRWLAALHDWIASEMALHPKLALLGDYNIAPEDRDVHDPKAWEGQNLVSPEERAAF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +L +G DA R +YS+WDY ++ +N G+RIDHI+LS + S +D Sbjct: 180 VQLIGLGLVDAFRQFEQPEKIYSWWDYRMMAFRRNAGLRIDHILLSKALAEICSSCEVDK 239 Query: 244 KPRGWTKPSDHTPVIVSL 261 PR W +PSDH PV+ L Sbjct: 240 VPRKWDQPSDHAPVVAQL 257 >gi|71083659|ref|YP_266379.1| exodeoxyribonuclease III [Candidatus Pelagibacter ubique HTCC1062] gi|71062772|gb|AAZ21775.1| exodeoxyribonuclease III [Candidatus Pelagibacter ubique HTCC1062] Length = 258 Score = 205 bits (521), Expect = 6e-51, Method: Composition-based stats. Identities = 96/258 (37%), Positives = 158/258 (61%), Gaps = 1/258 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + +WNVNS+RARI N+ ++++ +PD++ +QE KT+D+ FP++ +L+Y GQK Sbjct: 1 MIITSWNVNSVRARIENIKEYLQKFSPDVVMMQEIKTQDETFPYDDFSALDYESHVFGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 SYNGVAI+SK++ + L D L + +++ N+Y P+GNP+ + K Sbjct: 61 SYNGVAIISKHKLENVKIDLIKDKLKQSRIISA-ELKHKKKNIQLINIYTPNGNPVDTDK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K +W+ + ++ + E +I AGD+NI+P D YN +E+DA + LE+R+ F Sbjct: 120 YTYKKNWLDKLIKQLKTLSKKNENIILAGDFNILPSAEDAYNIKGFEDDALYRLEIRKKF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +++ N+GF DA R H Y++WDY +W KN G+RIDH ++S +++ + I+ Sbjct: 180 REMINLGFHDAYRHIHGEKEGYTYWDYMRGAWQKNNGLRIDHFLVSNSLLNIVKNVNINK 239 Query: 244 KPRGWTKPSDHTPVIVSL 261 PRG KPSDHTP+ + L Sbjct: 240 DPRGKGKPSDHTPIEIEL 257 >gi|120610799|ref|YP_970477.1| exodeoxyribonuclease III [Acidovorax citrulli AAC00-1] gi|120589263|gb|ABM32703.1| Exodeoxyribonuclease III [Acidovorax citrulli AAC00-1] Length = 262 Score = 205 bits (521), Expect = 6e-51, Method: Composition-based stats. Identities = 111/257 (43%), Positives = 159/257 (61%), Gaps = 5/257 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+NVNSIRAR+ L W++E+ PD+ CLQE K D FP +++ Y GQK Sbjct: 1 MKIATFNVNSIRARLPALLQWLEESRPDVACLQELKCTDDAFPAGEIRAAGYGALWHGQK 60 Query: 64 SYNGVAILSKY-QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 ++NGVAIL++ PIE+ LPGD+ D Q+R++EA + + LYLP+GNP Sbjct: 61 AWNGVAILARGANPIEVQRGLPGDEADSQSRYLEAAVDG----VLVACLYLPNGNPAPGP 116 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K+D K++W+ R R A + EP++ AGD+NIIP D Y P W +DA F EVR + Sbjct: 117 KFDYKLAWLDRLARRAGVLRDRPEPVVLAGDFNIIPTERDVYKPGAWVDDALFRSEVRDA 176 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F+ L + G+TDA+RA H +Y+FWDY + +N G+RIDH++L+P A L A +D Sbjct: 177 FRALVDSGWTDALRAVHPDETVYTFWDYLRQRFQRNAGLRIDHLLLNPAAAHRLQDAGVD 236 Query: 243 TKPRGWTKPSDHTPVIV 259 + RG +PSDH P Sbjct: 237 REVRGRPRPSDHAPAWA 253 >gi|317126375|ref|YP_004100487.1| exodeoxyribonuclease III [Intrasporangium calvum DSM 43043] gi|315590463|gb|ADU49760.1| Exodeoxyribonuclease III [Intrasporangium calvum DSM 43043] Length = 263 Score = 205 bits (521), Expect = 6e-51, Method: Composition-based stats. Identities = 75/262 (28%), Positives = 123/262 (46%), Gaps = 3/262 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSIR+R+ + W+ ++ D++ LQETK + FP + + L Y + G Sbjct: 1 MRIATWNVNSIRSRVDRVTDWLVRSDVDVLALQETKAREDQFPHDRFRELGYEVAHHGLS 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ-TLRIGNLYLPHGNPITST 122 +NGVAI+S+ ++ G EA +RI +LY+P+G + Sbjct: 61 QWNGVAIVSRVGIEDVRVGFDGMPGWGDPAAAEARAIGALCGGVRIWSLYIPNGRTLEDP 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFA--GDYNIIPQPHDCYNPIIWENDACFTLEVR 180 K+ W+ L + A GD+NI P D ++ +E + R Sbjct: 121 HLLYKLDWLAALADAGRSWLADDPSAPIALLGDWNIAPFDEDVWSVPFYEGRTHTSPRER 180 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 +FQ + + GF D +R +Y++WDY + K +G+RID + SP + A Sbjct: 181 AAFQAVVDAGFADVVRPHCPGPGVYTYWDYVQLRFQKGRGMRIDFALCSPALARRVTGAA 240 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 ID + R SDH PV+ ++ Sbjct: 241 IDREARKGKGASDHAPVVFEIE 262 >gi|312961749|ref|ZP_07776247.1| exodeoxyribonuclease III [Pseudomonas fluorescens WH6] gi|311284008|gb|EFQ62591.1| exodeoxyribonuclease III [Pseudomonas fluorescens WH6] Length = 270 Score = 205 bits (521), Expect = 6e-51, Method: Composition-based stats. Identities = 84/269 (31%), Positives = 132/269 (49%), Gaps = 11/269 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +RAR H LAA I+++ PD+I LQETK D FP +Q+L YH+ GQK Sbjct: 1 MKIVSFNINGLRARPHQLAALIEKHQPDVIGLQETKVHDDQFPLAEVQALGYHVYYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122 + GVA+LS+ + + + GD+ D Q RFI TF + + + N Y P G Sbjct: 61 GHYGVALLSRQEALSVHKGFLGDEEDAQRRFIWGTFADEHGNPVTVMNGYFPQGESRDHP 120 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175 K+ K + + + ++ L+ GD NI P+ D + F Sbjct: 121 TKFPAKQRFYEDLQHLLESQFSNDQALVVMGDVNISPEDCDIGIGADNAKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232 E R+ +L+N G D+ R + +S++DY + + +G+RID IM S Sbjct: 181 LPEEREWMARLKNWGLVDSFRHLNPDVTDRFSWFDYRSRGFEDEPKRGLRIDVIMASTGL 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + A +D RG KPSDH P+ + L Sbjct: 241 VHRVKDAGVDYDLRGLEKPSDHAPIWLEL 269 >gi|78066923|ref|YP_369692.1| exodeoxyribonuclease III [Burkholderia sp. 383] gi|77967668|gb|ABB09048.1| Exodeoxyribonuclease III [Burkholderia sp. 383] Length = 258 Score = 205 bits (521), Expect = 6e-51, Method: Composition-based stats. Identities = 83/256 (32%), Positives = 131/256 (51%), Gaps = 1/256 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ R ++ W+ ++ D++CLQE K D+ FP L++ Y GQK Sbjct: 1 MKIATWNVNSLNVRKQHVLDWLAQSGTDVLCLQELKLPDEKFPRAELEAAGYRSWFTGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAIL++ + + ++ + +RI + Y P+G S K Sbjct: 61 TYNGVAILARDT-LSVDESDVVRNIPGFDDPQQRVVAATVDGVRIVSAYFPNGQAPDSDK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W+ + L+ L GDYNI P+ D ++P WE + + R F Sbjct: 120 FVYKMQWLDALQAWLRTELQRYPKLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +L +GF DA R +++WDY ++ +N G+RIDH++LSP S +D Sbjct: 180 AQLIELGFVDAFRRFEQPEKTFTWWDYRMMAFRRNAGLRIDHVLLSPALAETCTSCEVDR 239 Query: 244 KPRGWTKPSDHTPVIV 259 PR W +PSDHTPV+ Sbjct: 240 TPRTWEQPSDHTPVVA 255 >gi|33863562|ref|NP_895122.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9313] gi|33641011|emb|CAE21469.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9313] Length = 279 Score = 205 bits (521), Expect = 6e-51, Method: Composition-based stats. Identities = 89/272 (32%), Positives = 139/272 (51%), Gaps = 4/272 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSIR R+ + AW+K+ PD++CLQETK +D FP E ++ Y + GQK Sbjct: 1 MQIATWNVNSIRTRLDQVQAWLKDAQPDLLCLQETKVDDPLFPHEVFEAQGYQVHFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN----TQTLRIGNLYLPHGNPI 119 +YNGVAI+S+ ++ G+ + +RI N Y+P+G+ + Sbjct: 61 AYNGVAIVSRQPLEDVRRGFTGELPEDAEALQLGEQKRVISALVNNIRIVNAYVPNGSAL 120 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 S KY K+ W+ R+ + + +EPL GD+NI + D ++P + + Sbjct: 121 KSEKYPYKLEWLSCLNRYLCAQAKRDEPLCLVGDFNIALEARDIHHPELLTGGIMASELE 180 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R++ K+ D R + +S+WDY + +W +++G RIDHI L E S S Sbjct: 181 REALLKVLGDRLHDVFRVFEPDANHWSWWDYRSGAWDRDQGWRIDHIYLCDELLSQARSC 240 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271 I RG KPSDH PV V L+ ++ Sbjct: 241 VIHKHLRGHEKPSDHAPVSVDLNWTPTDDDEE 272 >gi|300823193|ref|ZP_07103326.1| exodeoxyribonuclease III [Escherichia coli MS 119-7] gi|331677629|ref|ZP_08378304.1| exodeoxyribonuclease III [Escherichia coli H591] gi|300524347|gb|EFK45416.1| exodeoxyribonuclease III [Escherichia coli MS 119-7] gi|331074089|gb|EGI45409.1| exodeoxyribonuclease III [Escherichia coli H591] Length = 272 Score = 205 bits (521), Expect = 6e-51, Method: Composition-based stats. Identities = 78/268 (29%), Positives = 124/268 (46%), Gaps = 8/268 (2%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + ++N+N +RAR H L A ++++ PD+I LQETK D FP E + L Y++ G Sbjct: 3 ATMKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHG 62 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 QK + GVA+L+K PI + PGDD + Q R I A + + N Y P G Sbjct: 63 QKGHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSPLGNVTVINGYFPQGESRDH 122 Query: 122 TK-YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDAC 174 + K + + + L+ + P++ GD NI P + + Sbjct: 123 PIKFPAKAQFYQNLQNYLETELKRDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCS 182 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 F E R+ +L + G D R + +S++DY + + N+G+RID ++ S Sbjct: 183 FLPEEREWMDRLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLA 242 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSL 261 ID + R KPSDH PV + Sbjct: 243 ECCVETGIDYEIRSMEKPSDHAPVWATF 270 >gi|121611360|ref|YP_999167.1| exodeoxyribonuclease III Xth [Verminephrobacter eiseniae EF01-2] gi|121556000|gb|ABM60149.1| exodeoxyribonuclease III Xth [Verminephrobacter eiseniae EF01-2] Length = 258 Score = 205 bits (521), Expect = 6e-51, Method: Composition-based stats. Identities = 89/257 (34%), Positives = 129/257 (50%), Gaps = 1/257 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ R+ + AW+ N D +CLQE K D FP LQ+ Y GQK Sbjct: 1 MKIATWNVNSLSVRLPQVLAWLAANPVDALCLQELKLSDDKFPHAALQAAGYDAVALGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAILS+++ +V ++P + + LR+ N Y +G S K Sbjct: 61 TYNGVAILSRHRLNAVVRNIPDFGDEQARVIAATLDSPLGP-LRLLNGYFVNGQEPGSEK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W++ L L+ AGD+N+ PQ D Y+P T R F Sbjct: 120 FAYKLRWLQALQDMVRAELAAHPRLVLAGDFNVAPQDRDSYDPEGLRETIHHTSAERAHF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q L +G DA R YS+WDY + KN+G+RIDHI++S + + ID Sbjct: 180 QALLALGLADAFRMFEQPGKSYSWWDYRMLGFQKNRGLRIDHILVSAALRPAVSACMIDR 239 Query: 244 KPRGWTKPSDHTPVIVS 260 PR +PSDH PV+++ Sbjct: 240 APRKNPQPSDHAPVVLT 256 >gi|41410014|ref|NP_962850.1| hypothetical protein MAP3916c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398847|gb|AAS06466.1| XthA [Mycobacterium avium subsp. paratuberculosis K-10] Length = 272 Score = 205 bits (521), Expect = 6e-51, Method: Composition-based stats. Identities = 78/271 (28%), Positives = 124/271 (45%), Gaps = 7/271 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSIR+R+ + W+ D++ +QETK D FP L Y + G Sbjct: 1 MRLATWNVNSIRSRLPRVLDWLARTEVDVLAMQETKCADGQFPTLPFFELGYEVAHVGFN 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQAR-----FIEATFTINTQTLRIGNLYLPHGNP 118 +NGVAI S+ ++ G +RI +LY+P+G Sbjct: 61 QWNGVAIASRVGLDDVRVGFEGQPSWSGKPEVAAAAEARALAATCAGVRIWSLYVPNGRA 120 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEE--PLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + Y K+ W+ A+ L + + AGD+NI PQ D ++ + + Sbjct: 121 VGDPHYAYKLDWLAALRDSAAAWLREDPAAQIALAGDWNIAPQDDDVWSMEFFAGATHVS 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 R++F + + F D +R +Y++WDY A + K +G+RID I+ SP + Sbjct: 181 EPERRAFNAILDAQFADLVRPFAPGPGVYTYWDYTALRFPKRQGMRIDFILGSPALARRV 240 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDIPEPR 267 A+ID + R SDH PV+V + EP Sbjct: 241 THAQIDREERKGKGASDHAPVLVDVSRDEPP 271 >gi|298487202|ref|ZP_07005251.1| Exodeoxyribonuclease III [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|298158226|gb|EFH99297.1| Exodeoxyribonuclease III [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] Length = 270 Score = 205 bits (521), Expect = 6e-51, Method: Composition-based stats. Identities = 90/270 (33%), Positives = 135/270 (50%), Gaps = 11/270 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +RAR H LAA I ++ PD+I LQETK D+ FP +++L YH+ GQK Sbjct: 1 MKIVSFNINGLRARPHQLAALIDKHQPDVIGLQETKVSDEQFPHAEVEALGYHVHFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122 + GVA+LS+ P+ + GDD + Q RFI T N Q + I N Y P G Sbjct: 61 GHYGVALLSRNPPLALHKGFEGDDEESQKRFIWGTCADSNGQPVTIMNGYFPQGESRDHP 120 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175 K+ K + + E+PLI GD NI PQ D + F Sbjct: 121 TKFPAKQRFYENLQTLLESHFSNEQPLIVMGDVNISPQDCDIGIGADNAKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232 E R+ ++L+N G D+ R + +S++DY + + +G+RID IM S Sbjct: 181 LPEEREWMERLKNWGLVDSFRHLYPEVVDRFSWFDYRSRGFEDEPKRGLRIDLIMTSTGL 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + +A +D RG KPSDH P+ + L+ Sbjct: 241 QPRIKAAGVDYDLRGMEKPSDHAPIWLELN 270 >gi|254431951|ref|ZP_05045654.1| exodeoxyribonuclease III [Cyanobium sp. PCC 7001] gi|197626404|gb|EDY38963.1| exodeoxyribonuclease III [Cyanobium sp. PCC 7001] Length = 278 Score = 205 bits (521), Expect = 6e-51, Method: Composition-based stats. Identities = 90/271 (33%), Positives = 141/271 (52%), Gaps = 4/271 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A+WNVNS+R R+ + W+++ P+++CLQETK D+ FP + Q L Y GQK Sbjct: 1 MRLASWNVNSVRTRLEQVTTWLEQERPEVLCLQETKVADELFPHDAFQELGYATAISGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHL----PGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +YNGVAILS ++ PGD + + + +R+ NLY+P+G+ + Sbjct: 61 AYNGVAILSLLPLEDVRIGFEALLPGDAEAQELSTQKRVISALVDGVRVLNLYVPNGSAL 120 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 S KY K+ W+ R+ + + E +PL GD+NI P+ D ++P + Sbjct: 121 RSEKYAYKLQWLACLRRYLAVQEEQGDPLCMLGDFNIGPEDRDLHDPDRLTGGIMASEAE 180 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 RQ+ ++ TDA R +S+WDY +W +++G RIDHI L + Sbjct: 181 RQALREALGDRLTDAFRLFEPEAGHWSWWDYRTGAWDRDRGWRIDHIYLCDTLAACATGC 240 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQ 270 RI RG +PSDH PV+V+L PE + Sbjct: 241 RIHKHTRGNVQPSDHAPVVVNLAWPEEDPED 271 >gi|158423021|ref|YP_001524313.1| exodeoxyribonuclease III protein [Azorhizobium caulinodans ORS 571] gi|158329910|dbj|BAF87395.1| exodeoxyribonuclease III protein [Azorhizobium caulinodans ORS 571] Length = 270 Score = 205 bits (521), Expect = 6e-51, Method: Composition-based stats. Identities = 94/261 (36%), Positives = 146/261 (55%), Gaps = 3/261 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+NVN + R+ L W++++ PD+ CLQE K + FP L+ Y GQK Sbjct: 1 MRIATFNVNGVNGRLPPLLDWLRQSKPDVACLQELKAPHERFPAAELEQAGYGAVWLGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 ++NGVAIL++ + + IG LY P+GNP K Sbjct: 61 AWNGVAILARGEMPVETRRGL---PGDPDDIQSRYIEAAVGGVLIGCLYAPNGNPAPGAK 117 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 +D K+ W++R +++Q L+L+ P++ AGD+NI+P+ D Y P W +DA F EVR +F Sbjct: 118 FDYKLRWLERLRNYSAQMLDLDLPMVLAGDFNIMPEERDVYAPERWRDDALFRPEVRAAF 177 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 L++ G+ DA+R H LY+FW Y ++++++ G+RIDH++LSP L SA +D Sbjct: 178 ADLRDDGWVDALRHLHPDARLYTFWKYLRNAFARDAGLRIDHLLLSPALAPRLVSAGVDR 237 Query: 244 KPRGWTKPSDHTPVIVSLDIP 264 RG SDH P ++LD P Sbjct: 238 AVRGRDHASDHAPAWITLDAP 258 >gi|51596420|ref|YP_070611.1| exonuclease III [Yersinia pseudotuberculosis IP 32953] gi|108807521|ref|YP_651437.1| exonuclease III [Yersinia pestis Antiqua] gi|108811797|ref|YP_647564.1| exonuclease III [Yersinia pestis Nepal516] gi|145598263|ref|YP_001162339.1| exonuclease III [Yersinia pestis Pestoides F] gi|149365909|ref|ZP_01887944.1| exodeoxyribonuclease III [Yersinia pestis CA88-4125] gi|153949149|ref|YP_001400949.1| exonuclease III [Yersinia pseudotuberculosis IP 31758] gi|161484800|ref|NP_669464.2| exonuclease III [Yersinia pestis KIM 10] gi|161511386|ref|NP_993308.2| exonuclease III [Yersinia pestis biovar Microtus str. 91001] gi|162420660|ref|YP_001606769.1| exonuclease III [Yersinia pestis Angola] gi|165927745|ref|ZP_02223577.1| exodeoxyribonuclease III [Yersinia pestis biovar Orientalis str. F1991016] gi|165939329|ref|ZP_02227877.1| exodeoxyribonuclease III [Yersinia pestis biovar Orientalis str. IP275] gi|166009140|ref|ZP_02230038.1| exodeoxyribonuclease III [Yersinia pestis biovar Antiqua str. E1979001] gi|166210881|ref|ZP_02236916.1| exodeoxyribonuclease III [Yersinia pestis biovar Antiqua str. B42003004] gi|167401408|ref|ZP_02306905.1| exodeoxyribonuclease III [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167420251|ref|ZP_02312004.1| exodeoxyribonuclease III [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167426574|ref|ZP_02318327.1| exodeoxyribonuclease III [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167469881|ref|ZP_02334585.1| exodeoxyribonuclease III [Yersinia pestis FV-1] gi|170024319|ref|YP_001720824.1| exonuclease III [Yersinia pseudotuberculosis YPIII] gi|186895466|ref|YP_001872578.1| exonuclease III [Yersinia pseudotuberculosis PB1/+] gi|218929268|ref|YP_002347143.1| exonuclease III [Yersinia pestis CO92] gi|229894844|ref|ZP_04510024.1| exonuclease III [Yersinia pestis Pestoides A] gi|229897588|ref|ZP_04512744.1| exonuclease III [Yersinia pestis biovar Orientalis str. PEXU2] gi|229898233|ref|ZP_04513381.1| exonuclease III [Yersinia pestis biovar Orientalis str. India 195] gi|229902093|ref|ZP_04517214.1| exonuclease III [Yersinia pestis Nepal516] gi|270490729|ref|ZP_06207803.1| exodeoxyribonuclease III [Yersinia pestis KIM D27] gi|294503787|ref|YP_003567849.1| exodeoxyribonuclease III [Yersinia pestis Z176003] gi|51589702|emb|CAH21332.1| exodeoxyribonuclease III [Yersinia pseudotuberculosis IP 32953] gi|108775445|gb|ABG17964.1| Exodeoxyribonuclease III [Yersinia pestis Nepal516] gi|108779434|gb|ABG13492.1| Exodeoxyribonuclease III [Yersinia pestis Antiqua] gi|115347879|emb|CAL20799.1| exodeoxyribonuclease III [Yersinia pestis CO92] gi|145209959|gb|ABP39366.1| Exodeoxyribonuclease III [Yersinia pestis Pestoides F] gi|149292322|gb|EDM42396.1| exodeoxyribonuclease III [Yersinia pestis CA88-4125] gi|152960644|gb|ABS48105.1| exodeoxyribonuclease III [Yersinia pseudotuberculosis IP 31758] gi|162353475|gb|ABX87423.1| exodeoxyribonuclease III [Yersinia pestis Angola] gi|165912670|gb|EDR31299.1| exodeoxyribonuclease III [Yersinia pestis biovar Orientalis str. IP275] gi|165920359|gb|EDR37636.1| exodeoxyribonuclease III [Yersinia pestis biovar Orientalis str. F1991016] gi|165991695|gb|EDR43996.1| exodeoxyribonuclease III [Yersinia pestis biovar Antiqua str. E1979001] gi|166208061|gb|EDR52541.1| exodeoxyribonuclease III [Yersinia pestis biovar Antiqua str. B42003004] gi|166961946|gb|EDR57967.1| exodeoxyribonuclease III [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167049104|gb|EDR60512.1| exodeoxyribonuclease III [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167054450|gb|EDR64262.1| exodeoxyribonuclease III [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169750853|gb|ACA68371.1| exodeoxyribonuclease III [Yersinia pseudotuberculosis YPIII] gi|186698492|gb|ACC89121.1| exodeoxyribonuclease III [Yersinia pseudotuberculosis PB1/+] gi|229680989|gb|EEO77084.1| exonuclease III [Yersinia pestis Nepal516] gi|229688799|gb|EEO80867.1| exonuclease III [Yersinia pestis biovar Orientalis str. India 195] gi|229693925|gb|EEO83974.1| exonuclease III [Yersinia pestis biovar Orientalis str. PEXU2] gi|229702317|gb|EEO90336.1| exonuclease III [Yersinia pestis Pestoides A] gi|262362092|gb|ACY58813.1| exodeoxyribonuclease III [Yersinia pestis D106004] gi|262365769|gb|ACY62326.1| exodeoxyribonuclease III [Yersinia pestis D182038] gi|270339233|gb|EFA50010.1| exodeoxyribonuclease III [Yersinia pestis KIM D27] gi|294354246|gb|ADE64587.1| exodeoxyribonuclease III [Yersinia pestis Z176003] gi|320015154|gb|ADV98725.1| exonuclease III [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 268 Score = 205 bits (521), Expect = 6e-51, Method: Composition-based stats. Identities = 87/268 (32%), Positives = 131/268 (48%), Gaps = 8/268 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H LAA I+++ PD+I LQETK D FP E + YH+ GQK Sbjct: 1 MKFVSFNINGLRARPHQLAAIIEQHQPDVIGLQETKVHDDMFPLEDVSQHGYHVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 + GVA+L+K QP+ + P D+ D Q R I A TL + N Y P G Sbjct: 61 GHYGVALLTKEQPLAVRRGFPSDEEDAQRRIIMADLATPQGTLTVINGYFPQGESRDHPI 120 Query: 124 -YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 + K + R+ ++L E ++ GD NI P D + F Sbjct: 121 KFPAKARFYADLQRYLEEQLSPEAQVLIMGDLNISPTDLDIGIGEDNRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ ++LQN G D RA + + +S++DY + + +N+G+RID ++ S + Sbjct: 181 PEEREWLERLQNWGLVDTFRAANPDCNDHFSWFDYRSRGFDENRGLRIDLLLASQPLAAR 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + ID RG KPSDH PV + Sbjct: 241 CIATGIDYAIRGMEKPSDHAPVWSEFSL 268 >gi|189350943|ref|YP_001946571.1| exodeoxyribonuclease III [Burkholderia multivorans ATCC 17616] gi|189334965|dbj|BAG44035.1| exodeoxyribonuclease III [Burkholderia multivorans ATCC 17616] Length = 258 Score = 205 bits (521), Expect = 7e-51, Method: Composition-based stats. Identities = 84/256 (32%), Positives = 133/256 (51%), Gaps = 1/256 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ R ++ W+ ++ D++CLQE K D+ FP L++ Y GQK Sbjct: 1 MKIATWNVNSLNVRKQHVLDWLAQSAVDVLCLQELKLPDEKFPRADLEAAGYRSWFAGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAIL++ + + + + + +RI + Y P+G + S K Sbjct: 61 TYNGVAILARDTLPFDESDVVRNIPGFEDTQQRV-IAVTIDGVRIVSAYFPNGQAVGSDK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W+ + ++ L GDYNI P+ D ++P WE + + + R F Sbjct: 120 FLYKMQWLDALHAWLRTEMQRYPKLALLGDYNIAPEDRDVHDPAKWEGENLVSPQERAHF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 KL +GF DA R +++WDY ++ +N G+RIDHI+LSP S +D Sbjct: 180 AKLIELGFVDAFRRFEQPEKTFTWWDYRMFAFRRNAGLRIDHILLSPALAGSCTSCEVDR 239 Query: 244 KPRGWTKPSDHTPVIV 259 PR W +PSDHTPV+ Sbjct: 240 VPRTWEQPSDHTPVVA 255 >gi|217977845|ref|YP_002361992.1| exodeoxyribonuclease III [Methylocella silvestris BL2] gi|217503221|gb|ACK50630.1| exodeoxyribonuclease III [Methylocella silvestris BL2] Length = 258 Score = 205 bits (521), Expect = 7e-51, Method: Composition-based stats. Identities = 124/258 (48%), Positives = 166/258 (64%), Gaps = 1/258 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+R R +L ++KE PD++CLQE K D+ FP+ +++ Y+ GQK Sbjct: 1 MQIATWNVNSVRQRTGHLLRYLKEQAPDVLCLQELKCVDEAFPWGEVEAAGYNAAVHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVAILSK PIE+ LPGD D AR+IEA +R+ ++YLP+GNP + K Sbjct: 61 GFNGVAILSK-APIEVKRGLPGDPTDEHARYIEAVIPHKQSVVRVASIYLPNGNPPDTEK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K++W+ R + A + L LEEPL+ AGDYN+IP DC +P W DA F + R F Sbjct: 120 YGYKLAWMDRLIAHARELLRLEEPLVLAGDYNVIPAAADCADPAAWVGDALFLPQTRARF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + L N+G TDA+RAT D LY+FWDY A +W +NKGIRIDH++LSP A L + ID Sbjct: 180 RTLLNLGLTDALRATTDEAGLYTFWDYQAGAWQRNKGIRIDHLLLSPGAADRLVTTTIDK 239 Query: 244 KPRGWTKPSDHTPVIVSL 261 R KPSDH PV + L Sbjct: 240 GLRAEDKPSDHVPVRIEL 257 >gi|170019904|ref|YP_001724858.1| exonuclease III [Escherichia coli ATCC 8739] gi|253773296|ref|YP_003036127.1| exonuclease III [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|300818391|ref|ZP_07098601.1| exodeoxyribonuclease III [Escherichia coli MS 107-1] gi|300904608|ref|ZP_07122444.1| exodeoxyribonuclease III [Escherichia coli MS 84-1] gi|300924797|ref|ZP_07140737.1| exodeoxyribonuclease III [Escherichia coli MS 182-1] gi|300951354|ref|ZP_07165196.1| exodeoxyribonuclease III [Escherichia coli MS 116-1] gi|300958643|ref|ZP_07170767.1| exodeoxyribonuclease III [Escherichia coli MS 175-1] gi|301303958|ref|ZP_07210076.1| exodeoxyribonuclease III [Escherichia coli MS 124-1] gi|301327485|ref|ZP_07220718.1| exodeoxyribonuclease III [Escherichia coli MS 78-1] gi|301647945|ref|ZP_07247720.1| exodeoxyribonuclease III [Escherichia coli MS 146-1] gi|309793523|ref|ZP_07687950.1| exodeoxyribonuclease III [Escherichia coli MS 145-7] gi|331642351|ref|ZP_08343486.1| exodeoxyribonuclease III [Escherichia coli H736] gi|169754832|gb|ACA77531.1| exodeoxyribonuclease III [Escherichia coli ATCC 8739] gi|253324340|gb|ACT28942.1| exodeoxyribonuclease III [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|260449129|gb|ACX39551.1| exodeoxyribonuclease III [Escherichia coli DH1] gi|300314694|gb|EFJ64478.1| exodeoxyribonuclease III [Escherichia coli MS 175-1] gi|300403439|gb|EFJ86977.1| exodeoxyribonuclease III [Escherichia coli MS 84-1] gi|300419004|gb|EFK02315.1| exodeoxyribonuclease III [Escherichia coli MS 182-1] gi|300449344|gb|EFK12964.1| exodeoxyribonuclease III [Escherichia coli MS 116-1] gi|300529031|gb|EFK50093.1| exodeoxyribonuclease III [Escherichia coli MS 107-1] gi|300840755|gb|EFK68515.1| exodeoxyribonuclease III [Escherichia coli MS 124-1] gi|300845916|gb|EFK73676.1| exodeoxyribonuclease III [Escherichia coli MS 78-1] gi|301073916|gb|EFK88722.1| exodeoxyribonuclease III [Escherichia coli MS 146-1] gi|308123110|gb|EFO60372.1| exodeoxyribonuclease III [Escherichia coli MS 145-7] gi|315061052|gb|ADT75379.1| exonuclease III [Escherichia coli W] gi|315136390|dbj|BAJ43549.1| exonuclease III [Escherichia coli DH1] gi|315257443|gb|EFU37411.1| exodeoxyribonuclease III [Escherichia coli MS 85-1] gi|324016423|gb|EGB85642.1| exodeoxyribonuclease III [Escherichia coli MS 117-3] gi|331039149|gb|EGI11369.1| exodeoxyribonuclease III [Escherichia coli H736] Length = 272 Score = 205 bits (521), Expect = 7e-51, Method: Composition-based stats. Identities = 78/268 (29%), Positives = 124/268 (46%), Gaps = 8/268 (2%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + ++N+N +RAR H L A ++++ PD+I LQETK D FP E + L Y++ G Sbjct: 3 ATMKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHG 62 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 QK + GVA+L+K PI + PGDD + Q R I A + + N Y P G Sbjct: 63 QKGHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSLLGNVTVINGYFPQGESRDH 122 Query: 122 TK-YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDAC 174 + K + + + L+ + P++ GD NI P + + Sbjct: 123 PIKFPAKAQFYQNLQNYLETELKRDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCS 182 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 F E R+ +L + G D R + +S++DY + + N+G+RID ++ S Sbjct: 183 FLPEEREWMDRLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLA 242 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSL 261 ID + R KPSDH PV + Sbjct: 243 ECCVETGIDYEIRSMEKPSDHAPVWATF 270 >gi|229591315|ref|YP_002873434.1| exonuclease III [Pseudomonas fluorescens SBW25] gi|229363181|emb|CAY50233.1| exodeoxyribonuclease III [Pseudomonas fluorescens SBW25] Length = 270 Score = 205 bits (521), Expect = 7e-51, Method: Composition-based stats. Identities = 85/269 (31%), Positives = 132/269 (49%), Gaps = 11/269 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +RAR H LAA I+++ PD+I LQETK D FP +Q+L YH+ GQK Sbjct: 1 MKIVSFNINGLRARPHQLAALIEKHQPDVIGLQETKVHDDQFPLAEVQALGYHVYYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122 + GVA+LS+ + + D+ D Q RFI TF + Q + I N Y P G Sbjct: 61 GHYGVALLSRQPALSLHKGFASDEEDAQRRFIWGTFADEHGQPVTIMNGYFPQGESRDHP 120 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175 K+ K + + + + ++ L+ GD NI P+ D + F Sbjct: 121 TKFPAKQRFYEDLQQLLESQFSNDQALVVMGDVNISPEDCDIGIGADNAKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232 E R+ +L+N G D+ R + +S++DY + + +G+RID IM S Sbjct: 181 LPEEREWMARLKNWGLVDSFRHLNPDVVDRFSWFDYRSRGFEDEPKRGLRIDVIMASNGL 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + A +D RG KPSDH P+ + L Sbjct: 241 LPRVKDAGVDYDLRGLEKPSDHAPIWLEL 269 >gi|256393746|ref|YP_003115310.1| exodeoxyribonuclease III Xth [Catenulispora acidiphila DSM 44928] gi|256359972|gb|ACU73469.1| exodeoxyribonuclease III Xth [Catenulispora acidiphila DSM 44928] Length = 261 Score = 205 bits (521), Expect = 7e-51, Method: Composition-based stats. Identities = 78/261 (29%), Positives = 120/261 (45%), Gaps = 1/261 (0%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 VV VATWNVNS+ AR+ L W+ PD++CLQE KT D+ FP L + Y T G Sbjct: 2 VVRVATWNVNSVTARVERLVGWLDSAKPDVVCLQELKTTDEAFPAGQLADVGYQAATWGT 61 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 +NGVAILS+ ++ P A +R+ +Y+P+G + Sbjct: 62 GRWNGVAILSRLPIADVWRGWPDLPDFDGVAEPRALTATCGG-VRVTCVYVPNGRELGHP 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 +D K+ W+ ++ E P GD+NI P D ++ ++ T R Sbjct: 121 HFDYKLRWLDSLTASVAEPARGELPYAVLGDFNIAPTDADVWDMSLFAESTHVTPAERAK 180 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 L+ G + + Y++WDY ++ KN G+RID + + + A +D Sbjct: 181 LADLEAQGLVEVLPRALKYDKPYTYWDYRQLAFPKNNGMRIDLVFGNAAFAGAVRDAYVD 240 Query: 243 TKPRGWTKPSDHTPVIVSLDI 263 + R SDH PV+V LD+ Sbjct: 241 REERKGKGASDHAPVVVDLDV 261 >gi|71735024|ref|YP_274825.1| exonuclease III [Pseudomonas syringae pv. phaseolicola 1448A] gi|257487832|ref|ZP_05641873.1| exonuclease III [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289625127|ref|ZP_06458081.1| exonuclease III [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289648704|ref|ZP_06480047.1| exonuclease III [Pseudomonas syringae pv. aesculi str. 2250] gi|71555577|gb|AAZ34788.1| exodeoxyribonuclease III [Pseudomonas syringae pv. phaseolicola 1448A] gi|320324615|gb|EFW80692.1| exonuclease III [Pseudomonas syringae pv. glycinea str. B076] gi|320328987|gb|EFW84986.1| exonuclease III [Pseudomonas syringae pv. glycinea str. race 4] gi|330867998|gb|EGH02707.1| exonuclease III [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330880714|gb|EGH14863.1| exonuclease III [Pseudomonas syringae pv. glycinea str. race 4] gi|330985313|gb|EGH83416.1| exonuclease III [Pseudomonas syringae pv. lachrymans str. M301315] gi|331008544|gb|EGH88600.1| exonuclease III [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 270 Score = 205 bits (521), Expect = 7e-51, Method: Composition-based stats. Identities = 90/270 (33%), Positives = 136/270 (50%), Gaps = 11/270 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +RAR H LAA I ++ PD+I LQETK D+ FP +++L YH+ GQK Sbjct: 1 MKIVSFNINGLRARPHQLAALIDKHQPDVIGLQETKVSDEQFPHAEVEALGYHVHFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122 + GVA+LS+ P+ + GDD + Q RFI T+ N Q + I N Y P G Sbjct: 61 GHYGVALLSRNPPLALHKGFEGDDEESQKRFIWGTYADSNGQPVTIMNGYFPQGESRDHP 120 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175 K+ K + + E+PLI GD NI PQ D + F Sbjct: 121 TKFPAKQRFYENLQTLLESHFSNEQPLIVMGDVNISPQDCDIGIGADNAKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232 E R+ ++L+N G D+ R + +S++DY + + +G+RID IM S Sbjct: 181 LPEEREWMERLKNWGLVDSFRHLYPEVVDRFSWFDYRSRGFEDEPKRGLRIDLIMTSTGL 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + +A +D RG KPSDH P+ + L+ Sbjct: 241 QPRIKAAGVDYDLRGMEKPSDHAPIWLELN 270 >gi|320086216|emb|CBY95990.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] Length = 292 Score = 205 bits (520), Expect = 7e-51, Method: Composition-based stats. Identities = 77/269 (28%), Positives = 122/269 (45%), Gaps = 8/269 (2%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + ++N+N +RAR H L A ++++ PD+I LQETK D+ FP E + L Y++ GQ Sbjct: 24 TMKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDEMFPLEEVAKLGYNVFYHGQ 83 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K + GVA+L+K PI + P D + Q R I A + + N Y P G Sbjct: 84 KGHYGVALLTKATPISVRRGFPDDGEEAQRRIIMAEIPSPLGNITVINGYFPQGESRDHP 143 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175 K+ K + + + L+ + P++ GD NI P + + F Sbjct: 144 LKFPAKAQFYQNLQNYLETELKCDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSF 203 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R+ +L G D R + +S++DY + + N+G+RID ++ S Sbjct: 204 LPEEREWMSRLLKWGLVDTFREANPQTMDKFSWFDYRSKGFVDNRGLRIDLLLASAPLAE 263 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 ID R KPSDH PV + + Sbjct: 264 RCAETGIDYDIRSMEKPSDHAPVWATFRV 292 >gi|307153787|ref|YP_003889171.1| exodeoxyribonuclease III [Cyanothece sp. PCC 7822] gi|306984015|gb|ADN15896.1| exodeoxyribonuclease III [Cyanothece sp. PCC 7822] Length = 264 Score = 205 bits (520), Expect = 7e-51, Method: Composition-based stats. Identities = 90/264 (34%), Positives = 130/264 (49%), Gaps = 6/264 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSIR R ++ W++ N D++CLQETK D +FP + L YH+ GQ Sbjct: 1 MKIATWNVNSIRIRQQQVSHWLQMNPVDVLCLQETKVIDADFPKMPFEELGYHLYISGQP 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT-----INTQTLRIGNLYLPHGNP 118 SYNGVA+LS+ ++ +RI NLY+P+G Sbjct: 61 SYNGVALLSRQPLEDVRIGFTQVLGVDDVLAATFDQQKRVISGIFHDVRIVNLYVPNGAD 120 Query: 119 ITSTKYDDK-ISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 ++S KY K + + L GD+N+ P+ D +NP E T Sbjct: 121 LSSDKYAYKLQWLKMLRNYLTLFKENYPQELCVCGDFNVAPEDKDIHNPKGKETHIMATP 180 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 + R++ Q++ +G DA R YS+WDY + + +N+G RIDH L+P+ Sbjct: 181 QERKALQEVLEIGLKDAFRKFTAEGGHYSWWDYRSGGFQRNRGWRIDHHFLTPKLYEQAT 240 Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261 S ID +PR KPSDHTPVIV Sbjct: 241 SCTIDIEPRKQEKPSDHTPVIVEF 264 >gi|170694716|ref|ZP_02885867.1| exodeoxyribonuclease III Xth [Burkholderia graminis C4D1M] gi|170140347|gb|EDT08524.1| exodeoxyribonuclease III Xth [Burkholderia graminis C4D1M] Length = 258 Score = 205 bits (520), Expect = 7e-51, Method: Composition-based stats. Identities = 83/258 (32%), Positives = 128/258 (49%), Gaps = 1/258 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS++ R ++ W++ + D++CLQE K D+ FP L+ Y GQK Sbjct: 1 MKIATWNVNSLKVRQQHVIDWLETSGTDVLCLQELKLPDEKFPRAELEEKGYRSWFAGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGV IL + + + ++ + + +RI + Y P+G + K Sbjct: 61 TYNGVGILVR-AGLNVDEASVVRNIPGFDDLQQRVVAATVEGVRIISAYFPNGQAPGTDK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W+ + + L L GDYNI P D ++P WE + E R F Sbjct: 120 FAYKLRWLAALHDWVKSEMALYPKLALLGDYNIAPDDRDVHDPKAWEGQNLVSPEERAEF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +L +G DA R +YS+WDY ++ +N G+RIDHI+LS S +D Sbjct: 180 VRLIELGLVDAFRQFEQPEKIYSWWDYRMMAFRRNAGLRIDHILLSKALAETCASCEVDK 239 Query: 244 KPRGWTKPSDHTPVIVSL 261 PR W +PSDH PV+ L Sbjct: 240 VPRKWDQPSDHAPVVAQL 257 >gi|309812281|ref|ZP_07706036.1| exodeoxyribonuclease III [Dermacoccus sp. Ellin185] gi|308433586|gb|EFP57463.1| exodeoxyribonuclease III [Dermacoccus sp. Ellin185] Length = 262 Score = 205 bits (520), Expect = 7e-51, Method: Composition-based stats. Identities = 80/262 (30%), Positives = 127/262 (48%), Gaps = 3/262 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSIR R+ + A+++ + D++ +QETK +D+ FP + Y + G Sbjct: 1 MRIATWNVNSIRTRVDRVIAFLERGDVDVLAMQETKCKDEQFPMARFEEAGYEVAHHGLN 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT-LRIGNLYLPHGNPITST 122 +NGVAI S+ ++ EA T +R+ +LY+P+G I Sbjct: 61 QWNGVAIASRVGLEDVQIGFEDMPGFGDPIAAEARAIAATCDGVRMWSLYVPNGREIGHP 120 Query: 123 KYDDKISWIKRFLRFASQRL--ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 Y+ K+ W+ + L E + GD+NI P+ D ++P +E T R Sbjct: 121 HYEYKLDWLAALRADGEKWLTENPEAQIALTGDWNIAPRDEDVWDPAFFEGKTHVTQPER 180 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 +FQ + + G+ D +R + Y++WDY + K +G+RID + SP + A Sbjct: 181 DAFQAMIDTGYADVVRPHTNEPRTYTYWDYTQLRFPKKQGMRIDFALCSPALAGRVQGAV 240 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 ID R SDH PVIV LD Sbjct: 241 IDRDERKGKGASDHAPVIVQLD 262 >gi|283785027|ref|YP_003364892.1| exodeoxyribonuclease III [Citrobacter rodentium ICC168] gi|282948481|emb|CBG88070.1| exodeoxyribonuclease III [Citrobacter rodentium ICC168] Length = 268 Score = 205 bits (520), Expect = 7e-51, Method: Composition-based stats. Identities = 82/268 (30%), Positives = 124/268 (46%), Gaps = 8/268 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A ++++ PD+I LQETK D FP E + L Y++ GQK Sbjct: 1 MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEDVARLGYNVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122 + GVA+L+K PI + P D + Q R I A + + N Y P G Sbjct: 61 GHYGVALLTKETPIAVRRGFPDDGEEAQRRIIMAELPSPLGNVTVINGYFPQGESRDHPL 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACFT 176 K+ K + + + L+ + P++ GD NI P D + F Sbjct: 121 KFPAKAQFYQNLQNYLDSELKRDNPVLIMGDMNISPSDRDIGIGEENRRRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +L N G D R H + +S++DY + + N+G+RID ++ S Sbjct: 181 PEEREWMDRLLNWGLVDTFRHAHPETNDKFSWFDYRSKGFDDNRGLRIDLLLASQPLAER 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 ID RG KPSDH PV D+ Sbjct: 241 CVETGIDYAIRGMEKPSDHAPVWAKFDV 268 >gi|227885825|ref|ZP_04003630.1| exodeoxyribonuclease III [Escherichia coli 83972] gi|301050910|ref|ZP_07197761.1| exodeoxyribonuclease III [Escherichia coli MS 185-1] gi|26108407|gb|AAN80609.1|AE016761_184 Exodeoxyribonuclease III [Escherichia coli CFT073] gi|227837398|gb|EEJ47864.1| exodeoxyribonuclease III [Escherichia coli 83972] gi|300297429|gb|EFJ53814.1| exodeoxyribonuclease III [Escherichia coli MS 185-1] gi|307553768|gb|ADN46543.1| exodeoxyribonuclease III [Escherichia coli ABU 83972] Length = 272 Score = 205 bits (520), Expect = 7e-51, Method: Composition-based stats. Identities = 79/268 (29%), Positives = 125/268 (46%), Gaps = 8/268 (2%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + ++N+N +RAR H L A ++++ PD+I LQETK D FP E + L Y++ G Sbjct: 3 ATMKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHG 62 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 QK + GVA+L+K PI + PGDD + Q R I A + + N Y P G Sbjct: 63 QKGHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSPLGNVTVINGYFPQGESRDH 122 Query: 122 TK-YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDAC 174 + K + + + L+ E P++ GD NI P + + Sbjct: 123 PIKFSAKAQFYQNLQNYLETELKRENPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCS 182 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 F E R+ ++L + G D R + +S++DY + + N+G+RID ++ S Sbjct: 183 FLPEEREWMERLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLA 242 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSL 261 ID + R KPSDH PV + Sbjct: 243 ECCVETGIDYEIRSMEKPSDHAPVWATF 270 >gi|301168642|emb|CBW28232.1| exonuclease III [Haemophilus influenzae 10810] Length = 267 Score = 205 bits (520), Expect = 7e-51, Method: Composition-based stats. Identities = 81/267 (30%), Positives = 127/267 (47%), Gaps = 8/267 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A I++ PD+I LQE K D+ FP+E ++L YH+ GQK Sbjct: 1 MKFISFNINGLRARPHQLEAIIEKYQPDVIGLQEIKVADEAFPYEITENLGYHVFHHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122 + GVA+L+K +P + P D+ D Q R I A L N Y P G T Sbjct: 61 GHYGVALLTKQEPKVVRRGFPTDNEDAQKRIIMADLETEFGLLTAINGYFPQGESRAHET 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + ++ + + P++ GD NI P + + F Sbjct: 121 KFPAKEKFYADLQQYLEKEHDKSNPILIMGDMNISPSDLDIGIGDENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R +Q+L + G D+ R + T + +S++DY + + N+G+RIDHI++S + Sbjct: 181 PEERAWYQRLYDYGLEDSFRKLNPTANDKFSWFDYRSKGFDDNRGLRIDHILVSQKLAER 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262 I R KPSDH P+ Sbjct: 241 CVDVGIALDIRAMEKPSDHAPIWAEFK 267 >gi|242239395|ref|YP_002987576.1| exodeoxyribonuclease III [Dickeya dadantii Ech703] gi|242131452|gb|ACS85754.1| exodeoxyribonuclease III [Dickeya dadantii Ech703] Length = 268 Score = 205 bits (520), Expect = 7e-51, Method: Composition-based stats. Identities = 84/266 (31%), Positives = 125/266 (46%), Gaps = 8/266 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H LAA I+++ PD+I LQETK D FP E + YH+ GQK Sbjct: 1 MKFVSFNINGLRARPHQLAAVIEQHQPDVIGLQETKVHDDVFPLEDVAKFGYHVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122 + GVA+L++ P+ + P D+ D Q R I A TL + N Y P G Sbjct: 61 GHYGVAMLTRNTPLAVRRGFPTDEEDAQRRIIMADLETPLGTLTVINGYFPQGESRDHPV 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + + + E+P++ GD NI P D + F Sbjct: 121 KFPAKTRFYQDLQHYLEHHHNAEQPVLIMGDMNISPTDLDIGIGEDSRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +LQ+ G D RA + +S++DY + + N+G+RID I+ S S Sbjct: 181 PEEREWMLRLQDWGLVDTFRAQNPECRDRFSWFDYRSSGFDDNRGLRIDLILASQPLASR 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 + ID R KPSDH P+ Sbjct: 241 CSATGIDYAIRSMEKPSDHAPIWAEF 266 >gi|300930770|ref|ZP_07146143.1| exodeoxyribonuclease III [Escherichia coli MS 187-1] gi|300461403|gb|EFK24896.1| exodeoxyribonuclease III [Escherichia coli MS 187-1] Length = 272 Score = 205 bits (520), Expect = 7e-51, Method: Composition-based stats. Identities = 78/268 (29%), Positives = 124/268 (46%), Gaps = 8/268 (2%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + ++N+N +RAR H L A ++++ PD+I LQETK D FP E + L Y++ G Sbjct: 3 ATMKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHG 62 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 QK + GVA+L+K PI + PGDD + Q R I A + + N Y P G Sbjct: 63 QKGHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSLLGNVTVINGYFPQGESRDH 122 Query: 122 TK-YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDAC 174 + K + + + L+ + P++ GD NI P + + Sbjct: 123 PIKFPAKAQFYQHLQNYLETELKRDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCS 182 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 F E R+ +L + G D R + +S++DY + + N+G+RID ++ S Sbjct: 183 FLPEEREWMDRLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLA 242 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSL 261 ID + R KPSDH PV + Sbjct: 243 ECCVETGIDYEIRSMEKPSDHAPVWATF 270 >gi|307729190|ref|YP_003906414.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1003] gi|307583725|gb|ADN57123.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1003] Length = 258 Score = 205 bits (520), Expect = 7e-51, Method: Composition-based stats. Identities = 84/258 (32%), Positives = 128/258 (49%), Gaps = 1/258 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS++ R ++ W++ + D++CLQE K D+ FP L+ Y GQK Sbjct: 1 MKIATWNVNSLKVRQQHVIDWLETSRTDVLCLQELKLPDEKFPRAELEEKGYRSWFAGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGV IL + + I + ++ + +RI + Y P+G + K Sbjct: 61 TYNGVGILVR-EGISVDETTIVRNIPGFDDLQQRVVAATVDGVRIISAYFPNGQAPGTDK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W+ + + L L GDYNI P D ++P WE + E R F Sbjct: 120 FAYKLRWLAALHDWVQSEMALYPKLALLGDYNIAPDDRDVHDPKAWEGQNLVSPEERAEF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +L +G DA R +YS+WDY ++ +N G+RIDHI+LS S +D Sbjct: 180 VRLTELGLVDAFRQFEQPEKIYSWWDYRMMAFRRNAGLRIDHILLSKPLAETCTSCEVDK 239 Query: 244 KPRGWTKPSDHTPVIVSL 261 PR W +PSDH PV+ L Sbjct: 240 VPRKWDQPSDHAPVVAQL 257 >gi|254228998|ref|ZP_04922419.1| exodeoxyribonuclease III [Vibrio sp. Ex25] gi|262394738|ref|YP_003286592.1| exodeoxyribonuclease III [Vibrio sp. Ex25] gi|151938466|gb|EDN57303.1| exodeoxyribonuclease III [Vibrio sp. Ex25] gi|262338332|gb|ACY52127.1| exodeoxyribonuclease III [Vibrio sp. Ex25] Length = 268 Score = 205 bits (520), Expect = 8e-51, Method: Composition-based stats. Identities = 78/268 (29%), Positives = 133/268 (49%), Gaps = 9/268 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V ++N+N +RAR+H L A I ++ PD+I LQE K D+ FP E ++++ Y + GQK Sbjct: 1 MKVISFNINGLRARLHQLQALIDKHQPDVIGLQEIKVHDEAFPIEAVEAMGYKVYFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121 ++ GVA+L K +P+ + P ++ + + N + + + N Y P G+ I+ Sbjct: 61 AHYGVAMLCKQEPLHVQKGFPTDNEEHQKRMIMATFLNENGEKVTVLNGYFPQGDNISHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175 TK+ K + K + + + +E LI GD NI P + F Sbjct: 121 TKFPYKRQFYKDLMTYLNDHHNSDEQLIVMGDINISPIDADIGIGEPNRKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R+ + L + GF D R + + +S++DY + + N+G+RID I+ +P Sbjct: 181 QPEEREWLKTLLDWGFEDTFRKLYPEVNDQFSWFDYRSRGFDDNRGLRIDVILATPSLAQ 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + ID + RG KPSDH P+ + Sbjct: 241 KCIDSGIDYELRGIEKPSDHAPIWSTFK 268 >gi|261493298|ref|ZP_05989824.1| exodeoxyribonuclease III [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261496564|ref|ZP_05992944.1| exodeoxyribonuclease III [Mannheimia haemolytica serotype A2 str. OVINE] gi|261307767|gb|EEY09090.1| exodeoxyribonuclease III [Mannheimia haemolytica serotype A2 str. OVINE] gi|261310942|gb|EEY12119.1| exodeoxyribonuclease III [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 291 Score = 205 bits (520), Expect = 8e-51, Method: Composition-based stats. Identities = 84/267 (31%), Positives = 130/267 (48%), Gaps = 8/267 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A I+++ PD++ LQE K D++FP++ + L YH+ GQK Sbjct: 25 MKFISFNINGLRARPHQLEAIIEKHQPDVLGLQEIKVADEDFPYDLVNHLGYHVFHHGQK 84 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122 + GVA+L+K +PI + P D LD Q R I A + L + N Y P G + T Sbjct: 85 GHYGVALLTKKEPIAVRKGFPTDVLDAQKRMIMADIETDFGVLTVLNGYFPQGENRSHET 144 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + + L+ E P+I GD NI P + + F Sbjct: 145 KFPAKQKFYADLQNYLESELKPENPIIIMGDMNISPTDLDIGIGEPNRKRWLRDGKCSFL 204 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +L + G D RA + + +S++DY + + N+G+RID I+ S Sbjct: 205 PEEREWLDRLYSYGLVDTFRAGNPDVNDKFSWFDYRSKGFDDNRGLRIDLILASKSLAER 264 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262 ID R KPSDH+PV + Sbjct: 265 CVETGIDLDIRAMEKPSDHSPVWATFK 291 >gi|307329665|ref|ZP_07608823.1| exodeoxyribonuclease III Xth [Streptomyces violaceusniger Tu 4113] gi|306884723|gb|EFN15751.1| exodeoxyribonuclease III Xth [Streptomyces violaceusniger Tu 4113] Length = 259 Score = 205 bits (520), Expect = 8e-51, Method: Composition-based stats. Identities = 74/260 (28%), Positives = 128/260 (49%), Gaps = 1/260 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSI AR+ L AW++ + D++C+QETK + FP+E L+ L Y Sbjct: 1 MRIATWNVNSITARLPRLLAWLESSGTDVLCVQETKCAESAFPYEPLRELGYEAAVNATG 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVA++SK ++ LPG + A +R+ ++Y+P+G I Sbjct: 61 RWNGVALVSKAGLTDVTVGLPGGPDYDGDQEPRAIGATCGP-VRLWSVYVPNGREIGHPH 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 YD K+ W++ + + P GD+N+ P D ++ ++ T R++ Sbjct: 120 YDYKLRWLEALRTAVAGDAAGDRPFAVLGDFNVAPTDEDVWDRSAFDGLTHVTDLEREAL 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 L+ G +D + +++WDY + KN+G+RID + + + A +D Sbjct: 180 AALREAGLSDVVPRPLKYDRPFTYWDYRELGFPKNRGMRIDLVYGNEVFAKAVGDAYVDR 239 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 + R SDH PV+V L++ Sbjct: 240 EERKGKGASDHAPVVVDLEV 259 >gi|327480794|gb|AEA84104.1| exonuclease III [Pseudomonas stutzeri DSM 4166] Length = 270 Score = 205 bits (520), Expect = 8e-51, Method: Composition-based stats. Identities = 83/269 (30%), Positives = 131/269 (48%), Gaps = 11/269 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +RAR H L+A I ++ PD+I LQETK D+ FP +++L YH+ GQK Sbjct: 1 MKIVSFNINGLRARPHQLSAIIDKHQPDVIGLQETKVADEQFPQAEIEALGYHVHYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122 + GVA+LS+ P+E+ P D + Q RFI F N Q + + N Y P G Sbjct: 61 GHYGVALLSRQAPLEVHKGFPSDGEESQKRFIWGRFADANGQPVTVMNGYFPQGESRAHP 120 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175 K+ K + QR +E L GD+NI PQ D + F Sbjct: 121 VKFPAKTKFYADLQALLEQRFSPDESLALMGDFNISPQDCDIGIGEVNAKRWLRTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKN--KGIRIDHIMLSPEA 232 E R+ ++++ G D+ R + +S++DY + + +G+RID+I+ + Sbjct: 181 LPEEREWLERIKGWGLQDSFRTLNPKVVDRFSWFDYRSRGFEDEPRRGLRIDYILTTHAL 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + +D R KPSDH PV + L Sbjct: 241 HERVTDCGVDYDIRAMEKPSDHCPVWIEL 269 >gi|91225244|ref|ZP_01260412.1| exodeoxyribonuclease III [Vibrio alginolyticus 12G01] gi|91189883|gb|EAS76155.1| exodeoxyribonuclease III [Vibrio alginolyticus 12G01] Length = 268 Score = 205 bits (520), Expect = 8e-51, Method: Composition-based stats. Identities = 78/268 (29%), Positives = 133/268 (49%), Gaps = 9/268 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V ++N+N +RAR+H L A I ++ PD+I LQE K D+ FP E ++++ Y + GQK Sbjct: 1 MKVISFNINGLRARLHQLQALIDKHQPDVIGLQEIKVHDEAFPIEAVEAMGYKVYFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121 ++ GVA+L K +P+ + P ++ + + N + + + N Y P G+ I+ Sbjct: 61 AHYGVAMLCKQEPLHVQKGFPTDNEEHQKRMIMATFLNENGEKVTVLNGYFPQGDNISHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175 TK+ K + K + + + +E LI GD NI P + F Sbjct: 121 TKFPYKRQFYKDLMTYLNDHHNNDEQLIVMGDINISPIDADIGIGEPNRKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R+ + L + GF D R + + +S++DY + + N+G+RID I+ +P Sbjct: 181 QPEEREWLKTLLDWGFVDTFRKLYPEVNDQFSWFDYRSRGFDDNRGLRIDVILATPSLAE 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + ID + RG KPSDH P+ + Sbjct: 241 KCIESGIDYELRGIEKPSDHAPIWSTFK 268 >gi|323526639|ref|YP_004228792.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1001] gi|323383641|gb|ADX55732.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1001] Length = 259 Score = 205 bits (520), Expect = 8e-51, Method: Composition-based stats. Identities = 81/258 (31%), Positives = 127/258 (49%), Gaps = 1/258 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS++ R ++ W++ + D++CLQE K D+ FP L+ Y GQK Sbjct: 1 MKIATWNVNSLKVRQQHVIDWLETSRTDVLCLQELKLPDEKFPRAELEEKGYRSWFAGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGV IL + + + ++ + +R+ + Y P+G + K Sbjct: 61 TYNGVGILVREG-LSVDEASVVRNIPGFEDLQQRVVAATVDGVRVISAYFPNGQAPGTDK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W+ + + L L GDYNI P D ++P WE + E R F Sbjct: 120 FAYKLRWLAALHDWVRSEMALYPKLALLGDYNIAPDDRDVHDPKAWEGQNLVSPEERAEF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +L +G DA R +YS+WDY ++ +N G+RIDHI+LS S +D Sbjct: 180 VRLTELGLVDAFRQFDQPEKIYSWWDYRMMAFRRNAGLRIDHILLSKPLAETCTSCEVDK 239 Query: 244 KPRGWTKPSDHTPVIVSL 261 PR W +PSDH PV+ + Sbjct: 240 VPRKWDQPSDHAPVVAQI 257 >gi|152984142|ref|YP_001348052.1| exonuclease III [Pseudomonas aeruginosa PA7] gi|150959300|gb|ABR81325.1| exodeoxyribonuclease III [Pseudomonas aeruginosa PA7] Length = 270 Score = 205 bits (520), Expect = 8e-51, Method: Composition-based stats. Identities = 88/269 (32%), Positives = 129/269 (47%), Gaps = 11/269 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +RAR H LAA I+ + PD+I LQETK D FP +++L YH+ GQK Sbjct: 1 MKIVSFNINGLRARPHQLAALIERHQPDVIGLQETKVADDQFPQAEIEALGYHVHYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122 + GVA+LS+ P+E+ P D + Q RFI TF L + N Y P G Sbjct: 61 GHYGVALLSRQAPLELHRGFPSDGEESQRRFIWGTFADAQGNPLTVMNGYFPQGENRDHP 120 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175 K+ K + + E+ L+ GD NI P+ D + F Sbjct: 121 TKFPAKQRFYADLQLLLENSFKPEQALVVMGDINISPEDCDIGIGEENRKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232 E R+ L+N G D+ RA + +S++DY + + +G+RID I+ S Sbjct: 181 LPEEREWLATLKNWGLVDSFRALNPEVTDRFSWFDYRSRGFEDTPKRGLRIDVILASRAL 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 S A ID RG KPSDH P+ + L Sbjct: 241 QSRFRDAGIDYDLRGMEKPSDHAPIWLEL 269 >gi|114321929|ref|YP_743612.1| exodeoxyribonuclease III [Alkalilimnicola ehrlichii MLHE-1] gi|114228323|gb|ABI58122.1| Exodeoxyribonuclease III [Alkalilimnicola ehrlichii MLHE-1] Length = 258 Score = 205 bits (520), Expect = 8e-51, Method: Composition-based stats. Identities = 84/262 (32%), Positives = 138/262 (52%), Gaps = 5/262 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A+WNVNS++ R+ + W++ PD++ LQETK D+ FP E L Y + GQ Sbjct: 1 MKLASWNVNSLKVRLPQVLDWLESRQPDLVGLQETKLTDERFPAEALNEAGYQVAYAGQP 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVA+L++ + E V D Q R + T LR NLY+P+G+ + S K Sbjct: 61 TYNGVAVLARGRAPEAVIRDIPGLDDPQRRVLGVTVG----DLRFINLYVPNGSEVGSEK 116 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF-TLEVRQS 182 Y K+ W+ R + ++ + L+ GD+NI P D ++P +W T E Sbjct: 117 YAYKLDWLARLADWLAEERRRHDKLVVVGDFNIAPDDRDVHDPELWREKVLCSTPEREAL 176 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 + +G TD R ++S+WDY +++ +N+G+RID ++ SP S+ +D Sbjct: 177 RRLTGELGLTDTFRLFDQPEKVWSWWDYRMNNFKRNRGLRIDLVLASPALYQACTSSYVD 236 Query: 243 TKPRGWTKPSDHTPVIVSLDIP 264 +PR W +PSDH P + ++ Sbjct: 237 REPRTWERPSDHAPAVAEFNLD 258 >gi|33593125|ref|NP_880769.1| putative exodeoxyribonuclease III [Bordetella pertussis Tohama I] gi|33563500|emb|CAE42388.1| putative exodeoxyribonuclease III [Bordetella pertussis Tohama I] Length = 260 Score = 205 bits (520), Expect = 8e-51, Method: Composition-based stats. Identities = 87/261 (33%), Positives = 130/261 (49%), Gaps = 1/261 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ R+ + W+ N D +C+QE K D FP + YH GQK Sbjct: 1 MKLATWNVNSLNVRLPQVLDWLAANPVDALCIQELKLTDDKFPLDAFTEAGYHAAWAGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAI+S+ +V + P D Q R + T +R+ Y P+G + S K Sbjct: 61 TYNGVAIISREPGFALVRNNP-RYEDPQQRILAVTLPSPAGDVRVICAYCPNGQSVDSDK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K++W + + + L GDYN+ P D +NP WE + R +F Sbjct: 120 YVYKLAWFDGLRDWLEEEMRTYPRLAILGDYNVAPADADVHNPEKWEGQVLVSEPERAAF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + L ++G TD+ R +S+WDY ++ +N G+RIDH++LS + ID Sbjct: 180 RALLDLGLTDSFRLFEQPEKSFSWWDYRQFAFRRNAGLRIDHVLLSDALKPHCVACVIDK 239 Query: 244 KPRGWTKPSDHTPVIVSLDIP 264 PR +PSDH PVI +L Sbjct: 240 APRANEQPSDHAPVIATLAFD 260 >gi|332187206|ref|ZP_08388946.1| exodeoxyribonuclease III [Sphingomonas sp. S17] gi|332012906|gb|EGI54971.1| exodeoxyribonuclease III [Sphingomonas sp. S17] Length = 257 Score = 205 bits (520), Expect = 8e-51, Method: Composition-based stats. Identities = 101/259 (38%), Positives = 152/259 (58%), Gaps = 5/259 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + T+NVN I+AR+ L ++ E + DI+CLQE K D+ FP +++ Y GQK Sbjct: 1 MKITTYNVNGIKARLPRLLEYLAEADADIVCLQELKASDETFPVADIEAAGYGAVWHGQK 60 Query: 64 SYNGVAILSKY-QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 S+NGVA+L++ QP+E L G+D D +R++E L + +LYLP+GNP Sbjct: 61 SWNGVAVLARGAQPVERQRGLAGEDEDEHSRYLECEVNG----LVVASLYLPNGNPQPGP 116 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K+D K+ W++R A + L E P + AGDYN+IP D ++ +DA E RQ+ Sbjct: 117 KFDYKLRWMERLAARARELLAEEVPAVLAGDYNVIPNDDDTFSVPAMASDALMQPESRQA 176 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 +++L G+TD++R +++FWDY A SW ++ G RIDH++LSP+A L A +D Sbjct: 177 YRRLLTQGWTDSVRTRAPKGGVWTFWDYQAGSWQRDAGFRIDHLLLSPQAADRLVDAGVD 236 Query: 243 TKPRGWTKPSDHTPVIVSL 261 RG K SDH P V L Sbjct: 237 KSYRGREKASDHAPTWVRL 255 >gi|300994386|ref|ZP_07180891.1| exodeoxyribonuclease III [Escherichia coli MS 45-1] gi|300406232|gb|EFJ89770.1| exodeoxyribonuclease III [Escherichia coli MS 45-1] gi|315290452|gb|EFU49827.1| exodeoxyribonuclease III [Escherichia coli MS 153-1] Length = 272 Score = 205 bits (520), Expect = 8e-51, Method: Composition-based stats. Identities = 79/268 (29%), Positives = 125/268 (46%), Gaps = 8/268 (2%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + ++N+N +RAR H L A ++++ PD+I LQETK D FP E + L Y++ G Sbjct: 3 ATMKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHG 62 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 QK + GVA+L+K PI + PGDD + Q R I A + + N Y P G Sbjct: 63 QKGHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSPLGNVTVINGYFPQGESRDH 122 Query: 122 TK-YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDAC 174 + K + + + L+ E P++ GD NI P + + Sbjct: 123 PIKFSAKAQFYQNLHNYLETELKRENPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCS 182 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 F E R+ ++L + G D R + +S++DY + + N+G+RID ++ S Sbjct: 183 FLPEEREWMERLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLA 242 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSL 261 ID + R KPSDH PV + Sbjct: 243 ECCVETGIDYEIRSMEKPSDHAPVWATF 270 >gi|118472074|ref|YP_885233.1| exodeoxyribonuclease III [Mycobacterium smegmatis str. MC2 155] gi|118173361|gb|ABK74257.1| exodeoxyribonuclease III [Mycobacterium smegmatis str. MC2 155] Length = 260 Score = 205 bits (520), Expect = 8e-51, Method: Composition-based stats. Identities = 79/261 (30%), Positives = 121/261 (46%), Gaps = 3/261 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + VATWNVNSIRAR+ + W+ + D++ +QETK D FP L Y + G Sbjct: 1 MRVATWNVNSIRARVDRVTDWLARADVDVLAMQETKCSDDKFPAMPFVELGYEVAYHGLN 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVAI S+ + A A +R+ +LY+P+G + S Sbjct: 61 QWNGVAIASRVGLENVQLGFDNQPAWEAAAEARALAATCG-GVRVWSLYVPNGRTVDSPH 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIF--AGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 Y K+ W+ A + L + GD+NI P D ++ + T + R Sbjct: 120 YAYKLEWLAALRDNAQKWLADDPQAQIALTGDWNIAPTDEDVWDIDFFAGSTHVTEKERA 179 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +FQ + + F D +R +Y++WDY + K +G+RID I+ SP + A I Sbjct: 180 AFQAIVDAQFADVVRPFAPGPGVYTYWDYTQLRFPKRQGMRIDFILGSPAFAQRVGHAEI 239 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 + R PSDH PV+V L+ Sbjct: 240 VREERKGKSPSDHAPVLVELN 260 >gi|261401182|ref|ZP_05987307.1| exodeoxyribonuclease III [Neisseria lactamica ATCC 23970] gi|269208860|gb|EEZ75315.1| exodeoxyribonuclease III [Neisseria lactamica ATCC 23970] Length = 256 Score = 205 bits (520), Expect = 9e-51, Method: Composition-based stats. Identities = 91/260 (35%), Positives = 132/260 (50%), Gaps = 4/260 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + TWNVNS+ R+ + + +N PDI+ LQE K + FP LQ + +H GQK Sbjct: 1 MKITTWNVNSLNVRLPQVQNLLADNPPDILVLQELKLDQDKFPAAALQMMGWHCVWSGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAI+S+ P ++ LP D Q R I AT +R+ N+Y +G + S K Sbjct: 61 TYNGVAIVSRNAPEDVHFGLPSLPDDPQRRVIAATVGG----VRVINVYCVNGEALDSPK 116 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K W F + L+ GD+NI P DCY+P W + RQ F Sbjct: 117 FKYKEQWFAALTEFVRDEMTRYGKLVLLGDFNIAPADADCYDPKKWYEKIHCSSVERQWF 176 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q L ++G TD++R H Y+++DY + + G+RIDHI++SP L R+D Sbjct: 177 QNLLDLGLTDSLRQVHPEGAFYTWFDYRGAMFQRKLGLRIDHILVSPAMAEALKDVRVDL 236 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 R +PSDH PV D Sbjct: 237 DTRALERPSDHAPVTAEFDW 256 >gi|226304979|ref|YP_002764937.1| exodeoxyribonuclease III [Rhodococcus erythropolis PR4] gi|226184094|dbj|BAH32198.1| putative exodeoxyribonuclease III [Rhodococcus erythropolis PR4] Length = 266 Score = 205 bits (520), Expect = 9e-51, Method: Composition-based stats. Identities = 75/265 (28%), Positives = 125/265 (47%), Gaps = 7/265 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+RAR + W+ ++ D++ +QETK +D+ FP+E + + Y + G Sbjct: 1 MRIATWNVNSVRARTDRIIDWLGRSDVDVLAMQETKCKDEQFPYERFKEIGYEVAHVGLS 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARF-----IEATFTINTQTLRIGNLYLPHGNP 118 +NGVAI S+ ++ + +R+ +LY+P+G Sbjct: 61 QWNGVAIASRVGLDDVQIGFEDQPGFDKDPEADPVREARAIGATCGGVRVWSLYVPNGRE 120 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIF--AGDYNIIPQPHDCYNPIIWENDACFT 176 + Y K+ W+ + A L+ + GD+N+ P D ++P +E + Sbjct: 121 LEDPHYAYKLDWLAKLRDDAEGWLKQDPDAQIALVGDWNVAPTDDDVWDPAFFEGKTHTS 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 R +F GF D +R +Y++WDY + K +G+RID I+ SP + + Sbjct: 181 EPERAAFTAFTESGFADVVRPYTPGPGVYTYWDYTQLRFPKKQGMRIDFILGSPAFAARV 240 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSL 261 +A ID R SDH PVIV L Sbjct: 241 EAAEIDRNERKGKGASDHAPVIVKL 265 >gi|238894275|ref|YP_002919009.1| exonuclease III [Klebsiella pneumoniae NTUH-K2044] gi|238546591|dbj|BAH62942.1| exonuclease III [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 272 Score = 205 bits (520), Expect = 9e-51, Method: Composition-based stats. Identities = 82/268 (30%), Positives = 127/268 (47%), Gaps = 8/268 (2%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + ++N+N +RAR H LAA ++++ PD+I LQETK D FP E + L Y++ G Sbjct: 3 ATMKFVSFNINGLRARPHQLAAIVEKHQPDVIGLQETKVHDDMFPLEEVARLGYNVFYHG 62 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 QK + GVA+L+K PI + P D + Q R I A + + N Y P G Sbjct: 63 QKGHYGVALLTKETPIAVRRGFPDDGEEAQRRIIMAEIPSPFGNVTVINGYFPQGESRDH 122 Query: 122 -TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDAC 174 TK+ K ++ + + L E P++ GD NI P + + Sbjct: 123 ETKFPAKAAFYQNLQNYLETELNKENPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCS 182 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHH-LYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 F E R+ +L G D R + +H +S++DY + + N+G+RID ++ S Sbjct: 183 FLPEEREWMDRLLGWGLVDTWRQANPDNHEHFSWFDYRSKGFDDNRGLRIDLLLASQPLA 242 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSL 261 ID + RG KPSDH PV + Sbjct: 243 QRCVETGIDYEIRGMEKPSDHAPVWATF 270 >gi|33866339|ref|NP_897898.1| exodeoxyribonuclease III [Synechococcus sp. WH 8102] gi|33639314|emb|CAE08322.1| exodeoxyribonuclease III [Synechococcus sp. WH 8102] Length = 278 Score = 204 bits (519), Expect = 9e-51, Method: Composition-based stats. Identities = 87/265 (32%), Positives = 138/265 (52%), Gaps = 4/265 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+R R+ + W+++ PD++CLQETK +D FP + ++ + + GQK Sbjct: 1 MRIATWNVNSVRTRLEQVLCWLEQTKPDLLCLQETKVDDPLFPMQAFENAGWQVSIHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARF----IEATFTINTQTLRIGNLYLPHGNPI 119 SYNGVA++S+ ++ G+ D + +R+ NLY+P+G+ + Sbjct: 61 SYNGVALVSREPLEDVRCGFVGELPDDAEAATLGEQRRVISGLLDGVRVLNLYVPNGSSL 120 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 +S KY K++W+ R+ + E EPL GD+NI + D ++P + Sbjct: 121 SSEKYPYKLTWLGCLKRYLDAQAERGEPLCMVGDFNIALEARDIHDPDRLSGSVMASDAE 180 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R + ++ DA R +S+WDY +W +++G RIDHI L E L S Sbjct: 181 RDALREALGNRLQDAFRMFEPDAGHWSWWDYRTGAWDRDRGWRIDHIYLCEELMGLARSC 240 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIP 264 I + RG +PSDH PV V LD P Sbjct: 241 SIHKQLRGNVQPSDHAPVSVDLDWP 265 >gi|269967644|ref|ZP_06181694.1| exodeoxyribonuclease III [Vibrio alginolyticus 40B] gi|269827731|gb|EEZ82015.1| exodeoxyribonuclease III [Vibrio alginolyticus 40B] Length = 268 Score = 204 bits (519), Expect = 9e-51, Method: Composition-based stats. Identities = 78/268 (29%), Positives = 133/268 (49%), Gaps = 9/268 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V ++N+N +RAR+H L A I ++ PD+I LQE K D+ FP E ++++ Y + GQK Sbjct: 1 MKVISFNINGLRARLHQLQALIDKHQPDVIGLQEIKVHDEAFPIEAVEAMGYKVYFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121 ++ GVA+L K +P+ + P ++ + + N + + + N Y P G+ I+ Sbjct: 61 AHYGVAMLCKQEPLHVQKGFPTDNEEHQKRMIMATFLNENGEKVTVLNGYFPQGDNISHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175 TK+ K + K + + + +E LI GD NI P + F Sbjct: 121 TKFPYKRQFYKDLMTYLNDHHNNDEQLIVMGDINISPIDADIGIGEPNRKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R+ + L + GF D R + + +S++DY + + N+G+RID I+ +P Sbjct: 181 QPEEREWLKALLDWGFVDTFRKLYPEVNDQFSWFDYRSRGFDDNRGLRIDVILATPSLAE 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + ID + RG KPSDH P+ + Sbjct: 241 KCIESGIDYELRGIEKPSDHAPIWSTFK 268 >gi|229493724|ref|ZP_04387508.1| exodeoxyribonuclease III [Rhodococcus erythropolis SK121] gi|229319393|gb|EEN85230.1| exodeoxyribonuclease III [Rhodococcus erythropolis SK121] Length = 266 Score = 204 bits (519), Expect = 9e-51, Method: Composition-based stats. Identities = 75/265 (28%), Positives = 126/265 (47%), Gaps = 7/265 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+RAR + W+ ++ D++ +QETK +D+ FP+E + + Y + G Sbjct: 1 MRIATWNVNSVRARTDRIIDWLGRSDVDVLAMQETKCKDEQFPYERFKEIGYEVAHVGLS 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARF-----IEATFTINTQTLRIGNLYLPHGNP 118 +NGVAI S+ ++ + +R+ +LY+P+G Sbjct: 61 QWNGVAIASRVGLDDVQIGFEDQPGFDKDPEADPVREARAIGATCGGVRVWSLYVPNGRE 120 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIF--AGDYNIIPQPHDCYNPIIWENDACFT 176 + Y K+ W+ + A L+ + GD+N+ P D ++P +E + Sbjct: 121 LEDPHYAYKLDWLAKLRDDAEGWLKQDPDAQIALVGDWNVAPTDDDVWDPAFFEGKTHTS 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 R +F GF D +R +Y++WDY + K +G+RID I+ SP + + Sbjct: 181 EPERAAFTAFTESGFADVVRPYTPGPGVYTYWDYTQLRFPKKQGMRIDFILGSPAFAARV 240 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSL 261 +A ID R SDH PVIV+L Sbjct: 241 EAAEIDRNERKGKGASDHAPVIVNL 265 >gi|307130940|ref|YP_003882956.1| exonuclease III [Dickeya dadantii 3937] gi|306528469|gb|ADM98399.1| exonuclease III [Dickeya dadantii 3937] Length = 268 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 86/266 (32%), Positives = 131/266 (49%), Gaps = 8/266 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H LAA I+++ PD+I LQETK D FP + ++ YH+ GQK Sbjct: 1 MKFVSFNINGLRARPHQLAAIIEQHQPDVIGLQETKVHDDMFPLDEVKQFGYHVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122 + GVA+L+K +P+ + P D+ D Q R I A TL + N Y P G Sbjct: 61 GHYGVALLTKAEPLAVRRGFPTDEEDAQRRIIMADLATPLGTLTVVNGYFPQGESRDHAV 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + + + Q + ++P++ GD NI P D + F Sbjct: 121 KFPAKTRFYQDLQHYLEQHHQADQPVLIMGDMNISPTDLDIGIGEDNRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ ++L+N G D RA + +S++DY + + N+G+RID IM + S Sbjct: 181 PEEREWMERLKNWGLVDTFRAANPECQDRFSWFDYRSAGFDDNRGLRIDLIMATAPLASR 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 + ID RG KPSDH PV Sbjct: 241 CAATGIDYAIRGMEKPSDHAPVWAEF 266 >gi|170733499|ref|YP_001765446.1| exodeoxyribonuclease III Xth [Burkholderia cenocepacia MC0-3] gi|169816741|gb|ACA91324.1| exodeoxyribonuclease III Xth [Burkholderia cenocepacia MC0-3] Length = 258 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 84/256 (32%), Positives = 131/256 (51%), Gaps = 1/256 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ R ++ W+ ++ D++CLQE K D+ FP L++ Y GQK Sbjct: 1 MKIATWNVNSLNVRKQHVLDWLAQSGTDVLCLQELKLPDEKFPRADLEAAGYRSWFTGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAIL + + + + + +RI + Y P+G + S K Sbjct: 61 TYNGVAILVRDTLVVDESDVVRNIPGFDDPQQRVIAATVDG-VRIVSAYFPNGQALDSDK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W+ + L+ L GDYNI P+ D ++P WE + + R F Sbjct: 120 FVYKMQWLDALQAWLRTELQRYPKLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +L +GF DA R +++WDY ++ +N G+RIDHI+LSP + S +D Sbjct: 180 AQLIELGFVDAFRRFEQPEKTFTWWDYRMMAFRRNAGLRIDHILLSPALAATCASCEVDR 239 Query: 244 KPRGWTKPSDHTPVIV 259 PR W +PSDHTPV+ Sbjct: 240 TPRTWEQPSDHTPVVA 255 >gi|186474317|ref|YP_001861659.1| exodeoxyribonuclease III Xth [Burkholderia phymatum STM815] gi|184196649|gb|ACC74613.1| exodeoxyribonuclease III Xth [Burkholderia phymatum STM815] Length = 308 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 104/261 (39%), Positives = 152/261 (58%), Gaps = 5/261 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+N+N IR+R+ L W++ PD++CLQE K D FP L Y GQ Sbjct: 1 MKLATFNINGIRSRLPALLQWLEREAPDVVCLQELKAPDSGFPEAELNRAGYGAIWHGQV 60 Query: 64 SYNGVAILSKY-QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 S+NGVAIL+K QP+E LPGD D +R+IEA + IG LYLP+GNP Sbjct: 61 SWNGVAILAKDAQPVETRRGLPGDPDDTHSRYIEAAVEG----ILIGCLYLPNGNPQPGP 116 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K+D K++W +R + +A + L+ P++ AGDYN++P D YNP W DA E R Sbjct: 117 KFDYKLAWFERLIVYAKRLLDSGHPVVLAGDYNVVPTDFDIYNPRSWLKDALLQPESRAC 176 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 + +L + G+TDA+R +++FWDY+ W +N G+RIDH++L+ +++ A +D Sbjct: 177 YARLLDQGWTDALRTRFPDEQIFTFWDYFRQHWERNSGLRIDHLLLNRPVAAMMRDAGVD 236 Query: 243 TKPRGWTKPSDHTPVIVSLDI 263 RG SDH P V LD+ Sbjct: 237 RWVRGEPHASDHAPAWVELDL 257 >gi|107101992|ref|ZP_01365910.1| hypothetical protein PaerPA_01003039 [Pseudomonas aeruginosa PACS2] Length = 270 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 87/269 (32%), Positives = 130/269 (48%), Gaps = 11/269 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +RAR H LAA I+ + PD+I LQETK D FP +++L YH+ GQK Sbjct: 1 MKIVSFNINGLRARPHQLAALIERHQPDVIGLQETKVADDQFPQAEIEALGYHVHYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122 + GVA+LS+ P+E+ P D + Q RFI TF + + N Y P G Sbjct: 61 GHYGVALLSRQAPLELHRGFPSDGEESQRRFIWGTFSDAQGNPITVMNGYFPQGENREHP 120 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175 K+ K + + E+ L+ GD NI P+ D + F Sbjct: 121 TKFPAKQRFYADLQSLLENSFKPEQALVVMGDINISPEDCDIGIGEENRKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKN--KGIRIDHIMLSPEA 232 E R+ L+N G D+ RA + + +S++DY + + N +G+RID I+ S Sbjct: 181 LPEEREWLATLKNWGLVDSFRALNPEVNDRFSWFDYRSRGFEDNPKRGLRIDVILASRVL 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 S A ID R KPSDH P+ + L Sbjct: 241 QSRFKDAGIDYDLRSMEKPSDHAPIWLEL 269 >gi|68248592|ref|YP_247704.1| exonuclease III [Haemophilus influenzae 86-028NP] gi|68056791|gb|AAX87044.1| exodeoxyribonuclease III [Haemophilus influenzae 86-028NP] Length = 267 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 82/267 (30%), Positives = 128/267 (47%), Gaps = 8/267 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A I++ PD+I LQE K D+ FP+E ++L YH+ GQK Sbjct: 1 MKFISFNINGLRARPHQLEAIIEKYQPDVIGLQEIKVADEAFPYEITENLGYHVFHHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122 + GVA+L+K +P I P D+ D Q R I A L + N Y P G T Sbjct: 61 GHYGVALLTKQEPKVIRRGFPTDNEDAQKRIIMADLETEFGLLTVINGYFPQGESRAHET 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + ++ + + P++ GD NI P + + F Sbjct: 121 KFPAKEKFYADLQQYLEKEHDRSNPILIMGDMNISPSDLDIGIGDENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R +Q+L + G D+ R + T + +S++DY + + N+G+RIDHI++S + Sbjct: 181 PEERAWYQRLYDYGLEDSFRKLNPTANDKFSWFDYRSKGFDDNRGLRIDHILISQKLAER 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262 I R KPSDH P+ Sbjct: 241 CVDVGIALDIRAMEKPSDHAPIWAEFK 267 >gi|226358180|ref|YP_002787919.1| Exodeoxyribonuclease III [Deinococcus deserti VCD115] gi|226319823|gb|ACO47817.1| putative Exodeoxyribonuclease III [Deinococcus deserti VCD115] Length = 270 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 82/258 (31%), Positives = 133/258 (51%), Gaps = 5/258 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ R+ + AW++ PD++ LQETK D FP L++L Y GQK Sbjct: 1 MKLATWNVNSLNVRLGQVMAWLEAQQPDVLALQETKLPDDRFPVAELEALGYRAVFSGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 SYNGVA+LS+ ++ +PG D + + + L + P+G + S K Sbjct: 61 SYNGVALLSRLPLEDVQIGIPGLDDEQRRVVAATVGGMRVVCLYV-----PNGQAVDSPK 115 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W+ + L L GD+N+ P+ D ++P W + RQ+F Sbjct: 116 YTYKLEWLSAVRAWLQLELMAHPRLAVVGDFNVAPEDRDVHSPKRWAGQVLVSEPERQAF 175 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + L ++G DA R ++S+W+Y + +N G+RIDH+++S + S +D Sbjct: 176 RALLDLGLHDAFRLHPQPERVFSWWNYGRLGFPRNWGLRIDHVLVSGILAAECQSCTVDL 235 Query: 244 KPRGWTKPSDHTPVIVSL 261 +PR +PSDH PV+ + Sbjct: 236 EPRRHERPSDHAPVVATF 253 >gi|296102796|ref|YP_003612942.1| exonuclease III [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057255|gb|ADF61993.1| exonuclease III [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 268 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 79/268 (29%), Positives = 124/268 (46%), Gaps = 8/268 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A ++++ PD+I LQETK D FP E + L Y++ GQK Sbjct: 1 MKFVSFNINGLRARPHQLEAIVEQHQPDVIGLQETKVHDDMFPLEEVVKLGYNVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122 + GVA+L+K P+ + PGD + Q R I A + + N Y P G T Sbjct: 61 GHYGVALLTKETPVSVRRGFPGDGEEAQRRIIMAEIPSALGNITVINGYFPQGESRDHET 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + + + + L+ E P++ GD NI P + + F Sbjct: 121 KFPAKAKFYQDLQDYLTTELKKENPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +L + G D R + +S++DY + + N+G+RID ++ S Sbjct: 181 PEEREWMDRLLSWGLVDTFRTANPDTQDRFSWFDYRSKGFDDNRGLRIDLLLASSPLAER 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 ID R KPSDH PV + Sbjct: 241 CIETGIDYDIRSMEKPSDHAPVWAKFKL 268 >gi|206580746|ref|YP_002239049.1| exodeoxyribonuclease III [Klebsiella pneumoniae 342] gi|206569804|gb|ACI11580.1| exodeoxyribonuclease III [Klebsiella pneumoniae 342] Length = 268 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 81/266 (30%), Positives = 124/266 (46%), Gaps = 8/266 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H LAA ++++ PD+I LQETK D FP E + L Y++ GQK Sbjct: 1 MKFVSFNINGLRARPHQLAAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122 + GVA+L+K PI + P D + Q R I A + + N Y P G T Sbjct: 61 GHYGVALLTKETPIAVRRGFPDDGEEAQRRIIMAEIPSPFGNVTVINGYFPQGESRDHET 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K ++ + + L E P++ GD NI P + + F Sbjct: 121 KFPAKAAFYQNLQNYLETELNKENPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +L G D R + +S++DY + + N+G+RID ++ S Sbjct: 181 PEEREWMDRLLGWGLVDTWRQANPDNQEHFSWFDYRSKGFDDNRGLRIDLLLASQPLAQR 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 ID + RG KPSDH PV + Sbjct: 241 CVETGIDYEIRGMEKPSDHAPVWATF 266 >gi|238754917|ref|ZP_04616267.1| Exodeoxyribonuclease III [Yersinia ruckeri ATCC 29473] gi|238706928|gb|EEP99295.1| Exodeoxyribonuclease III [Yersinia ruckeri ATCC 29473] Length = 268 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 88/268 (32%), Positives = 129/268 (48%), Gaps = 8/268 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H LAA I+++ PD+I LQETK D FP E + YH+ GQK Sbjct: 1 MKFVSFNINGLRARPHQLAAIIEQHQPDVIGLQETKVHDDMFPLEEVSQHGYHVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122 + GVA+L+K +P+ + P D+ D Q R I A TL + N Y P G Sbjct: 61 GHYGVALLTKQKPLAVRRGFPTDEEDAQRRIIMADLATPQGTLTVINGYFPQGESRDHPT 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACFT 176 K+ K + + + +Q L E ++ GD NI P D + F Sbjct: 121 KFPAKARFYQDLQNYLAQELTPEAQVLIMGDINISPTDRDIGIGEDNRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ ++LQN G D RA + YS++DY + + +N+G+RID +M S Sbjct: 181 PEEREWLERLQNWGLVDTFRAANPDCEDRYSWFDYRSRGFDENRGLRIDVLMASKPLAER 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + ID R KPSDH PV + Sbjct: 241 CIATGIDYDIRSMEKPSDHAPVWSEFSL 268 >gi|239814966|ref|YP_002943876.1| exodeoxyribonuclease III Xth [Variovorax paradoxus S110] gi|239801543|gb|ACS18610.1| exodeoxyribonuclease III Xth [Variovorax paradoxus S110] Length = 260 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 102/263 (38%), Positives = 154/263 (58%), Gaps = 5/263 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+NVN I +R+ + +W+ E PD+ CLQE K+ D+NFP ++ Y + GQ+ Sbjct: 1 MKIATFNVNGINSRLALVLSWLAEARPDVACLQELKSPDENFPAAAIREAGYGVLFHGQR 60 Query: 64 SYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 ++NGVAIL++ +PIE L G+ D Q+R++EA + +G LYLP+GNP Sbjct: 61 AWNGVAILARGREPIETGRGLDGNSEDSQSRYLEAVVNG----VIVGCLYLPNGNPQPGP 116 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K+D K+ W +R A P + AGD+N++P D YNP W++DA E R + Sbjct: 117 KFDYKLEWFERLNAHARLLYGCGMPAVLAGDFNVVPTDADIYNPASWQDDALLQPESRAA 176 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F +L G+TDAIR H +Y++WDY+ + W +N G+RIDH++L+ E L A +D Sbjct: 177 FARLLKQGWTDAIRTRHPREAIYTYWDYWRNRWPRNAGLRIDHLLLNRELAPFLADANVD 236 Query: 243 TKPRGWTKPSDHTPVIVSLDIPE 265 + RG SDH P LD+P Sbjct: 237 REVRGRPGASDHAPAWALLDLPA 259 >gi|206560581|ref|YP_002231346.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia cenocepacia J2315] gi|198036623|emb|CAR52521.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia cenocepacia J2315] Length = 258 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 85/256 (33%), Positives = 133/256 (51%), Gaps = 1/256 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ R ++ W+ ++ D++CLQE K D+ FP L++ Y GQK Sbjct: 1 MKIATWNVNSLNVRKQHVLDWLAQSGTDVLCLQELKLPDEKFPRADLEAAGYRSWFTGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAIL++ + + + + +RI + Y P+G + S K Sbjct: 61 TYNGVAILARDTLVVDESDVVRNIPGFDDPQQRVIAATVDG-VRIVSAYFPNGQALDSDK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W+ + L+ L GDYNI P+ D ++P WE + + R F Sbjct: 120 FVYKMQWLDALQAWLRTELQRYPKLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +L +GF DA R +++WDY ++ +N G+RIDHI+LSPE + S +D Sbjct: 180 AQLIELGFVDAFRRFEQPEKTFTWWDYRMMAFRRNAGLRIDHILLSPELAATCASCEVDR 239 Query: 244 KPRGWTKPSDHTPVIV 259 PR W +PSDHTPV+ Sbjct: 240 TPRTWEQPSDHTPVVA 255 >gi|146307459|ref|YP_001187924.1| exonuclease III [Pseudomonas mendocina ymp] gi|145575660|gb|ABP85192.1| Exodeoxyribonuclease III [Pseudomonas mendocina ymp] Length = 270 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 85/269 (31%), Positives = 133/269 (49%), Gaps = 11/269 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +RAR H L A I ++ PD+I LQETK D+ FP ++ L YH+ GQK Sbjct: 1 MKIVSFNINGLRARPHQLEALIAKHQPDVIGLQETKVADEQFPESEIRQLGYHVHYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122 + GVA+LS+ +P+ + P D + Q RFI TF + + + N Y P G Sbjct: 61 GHYGVALLSRQEPLNLQKGFPNDGEESQRRFIYGTFADAHGNPVTVMNGYFPQGESRDHP 120 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175 K+ K + + +R + ++ L+ GD NI P+ D + F Sbjct: 121 VKFPAKQRFYADLQQLLVERFDPQQALVVMGDINISPEDCDIGIGEANRLRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232 E R+ L+N G D+ R + T + +S++DY + + +G+RID I+ S Sbjct: 181 LPEEREWLATLKNWGLVDSFRHLNPTVNDRFSWFDYRSRGFEDEPKRGLRIDVILASQAL 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 L A ID RG KPSDH P+ + L Sbjct: 241 QGRLKDAGIDYDLRGMDKPSDHAPIWLEL 269 >gi|213967028|ref|ZP_03395178.1| exodeoxyribonuclease III [Pseudomonas syringae pv. tomato T1] gi|301385213|ref|ZP_07233631.1| exonuclease III [Pseudomonas syringae pv. tomato Max13] gi|302059606|ref|ZP_07251147.1| exonuclease III [Pseudomonas syringae pv. tomato K40] gi|302130154|ref|ZP_07256144.1| exonuclease III [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213928350|gb|EEB61895.1| exodeoxyribonuclease III [Pseudomonas syringae pv. tomato T1] Length = 270 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 89/269 (33%), Positives = 135/269 (50%), Gaps = 11/269 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +RAR H LAA I ++ PD+I LQETK D+ FP +++L YH+ GQK Sbjct: 1 MKIVSFNINGLRARPHQLAALIDKHQPDVIGLQETKVSDEQFPLADVEALGYHVHFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122 + GVA+LS+ P+ + DD + Q RFI T+ N Q + I N Y P G Sbjct: 61 GHYGVALLSRNPPLALHKGFESDDEESQKRFIWGTYADSNGQPVTIMNGYFPQGESRDHP 120 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175 K+ K + + + E+PLI GD NI PQ D + F Sbjct: 121 TKFPAKQRFYENLQALLEGQFSNEQPLIVMGDVNISPQDCDIGIGADNAKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232 E R+ ++L+N G D+ R + +S++DY + + +G+RID IM S Sbjct: 181 LPEEREWMERLKNWGLVDSFRYLYPEVSDRFSWFDYRSRGFEDEPKRGLRIDLIMTSTGL 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + +A +D RG KPSDH P+ + L Sbjct: 241 QPRIKAAGVDYDLRGMEKPSDHAPIWLEL 269 >gi|283457216|ref|YP_003361786.1| exonuclease III [Rothia mucilaginosa DY-18] gi|283133201|dbj|BAI63966.1| exonuclease III [Rothia mucilaginosa DY-18] Length = 309 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 71/264 (26%), Positives = 124/264 (46%), Gaps = 6/264 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+NSIRAR + + W+ E++ D++ LQETKT+D+ FPF+ + + Y + G Sbjct: 44 MKIATWNINSIRARENRVEDWLDEHDVDVLALQETKTKDETFPFDLFEFMGYEVAHFGLN 103 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIE----ATFTINTQTLRIGNLYLPHGNPI 119 +NGVAI S+ ++ + E +R+ +LY+P+G + Sbjct: 104 QWNGVAIASRVGLEDVQRGFDNQPHFGKPGEPEVLEARAIGATCGGVRVWSLYVPNGRGL 163 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL 177 T D K+ W++ + L GD+N+ P+ D ++ + + + Sbjct: 164 TDPHMDYKLHWMEALRQNVHNELAANPQSQLALVGDWNVAPEDADVWDIDYFLRNEMTHV 223 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 + + T Y++WDY A ++K++G+RID + SP + + Sbjct: 224 SEPERCAFAALLEEGMVDVVRPHTPGEYTYWDYQAGRFTKDEGMRIDFQLFSPALAARVE 283 Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261 A ID R SDHTPV+V + Sbjct: 284 RAWIDKVERAGEGASDHTPVVVEI 307 >gi|156973843|ref|YP_001444750.1| exonuclease III [Vibrio harveyi ATCC BAA-1116] gi|156525437|gb|ABU70523.1| hypothetical protein VIBHAR_01553 [Vibrio harveyi ATCC BAA-1116] Length = 268 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 81/267 (30%), Positives = 133/267 (49%), Gaps = 9/267 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V ++N+N +RAR+H L A I ++ PD+I LQE K D+ FP E ++++ Y + GQK Sbjct: 1 MKVISFNINGLRARLHQLQALIDKHQPDVIGLQEIKVHDEAFPIEDVEAMGYKVYFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121 ++ GVA+L K +PI + P ++ + + N + + + N Y P G+ I Sbjct: 61 AHYGVAMLCKQEPISVQKGFPTDNEEHQKRMIMATFEDENGEKVTVLNGYFPQGDNIAHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175 TKY K + K + + + +E LI GD NI P + F Sbjct: 121 TKYPYKRQFYKDLMTYLNDHHTNDEQLIVMGDINISPIDSDIGIGEPNRKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R+ + L + GF D R H + +S++DY + + N+G+RID I+++P Sbjct: 181 QPEEREWLKTLLDWGFEDTFRNLHPEVNDRFSWFDYRSRGFDDNRGLRIDVILVTPSLAK 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261 + ID + RG KPSDH P+ + Sbjct: 241 KCVESDIDYELRGIEKPSDHAPIWSTF 267 >gi|327188747|gb|EGE55945.1| exodeoxyribonuclease III protein [Rhizobium etli CNPAF512] Length = 263 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 117/262 (44%), Positives = 167/262 (63%), Gaps = 5/262 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+NVN I R+ L W+KE+ PD++CLQE KT+D FP + + Y GQ+ Sbjct: 1 MKIATYNVNGINGRLDILLRWLKEDAPDVVCLQELKTDDAKFPRKETERAGYGAVWHGQR 60 Query: 64 SYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 S+NGVAIL+K PI LPGD D +R+IEA + IG+LYLP+GNP S Sbjct: 61 SWNGVAILAKGKTPILTRRGLPGDPDDTHSRYIEAAVDG----VLIGSLYLPNGNPFPSA 116 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K++ K+ W +R +A++ LE+E P I AGD+N++P D Y P W +DA F EVR++ Sbjct: 117 KFEYKLRWFRRLSAYAAELLEIEVPSILAGDFNVMPTEIDVYKPERWLDDALFRPEVRKA 176 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 + +L G+TDA+R H +Y+FW Y+ +S+ ++ G+RIDH++LSP L SAR+ Sbjct: 177 YAQLVAQGWTDAVRHLHPGERIYTFWKYWRNSFERDAGLRIDHLLLSPTVAPWLRSARVR 236 Query: 243 TKPRGWTKPSDHTPVIVSLDIP 264 KPRGW SDH PV++ LDIP Sbjct: 237 RKPRGWEHTSDHAPVMIELDIP 258 >gi|218768830|ref|YP_002343342.1| exodeoxyribonuclease III [Neisseria meningitidis Z2491] gi|121052838|emb|CAM09187.1| exodeoxyribonuclease III [Neisseria meningitidis Z2491] Length = 256 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 90/260 (34%), Positives = 132/260 (50%), Gaps = 4/260 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + TWNVNS+ R+ + + +N PDI+ LQE K + FP LQ + +H GQK Sbjct: 1 MKITTWNVNSLNVRLPQVQNLLADNPPDILVLQELKLDQDKFPAAALQMMGWHCVWSGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAI+S+ P ++ LP D Q R I AT +R+ N+Y +G + S K Sbjct: 61 TYNGVAIVSRNAPEDVHIGLPALPDDPQRRVIAATVGG----VRVINVYCVNGEALDSPK 116 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K W F + L+ GD+NI P DCY+P W + RQ F Sbjct: 117 FKYKEQWFAALTEFVRDEMARHGKLVLLGDFNIAPADADCYDPEKWHEKIHCSSVERQWF 176 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q L ++G D++R H Y+++DY + + G+RIDHI++SP L R+D Sbjct: 177 QNLLDLGLADSLRQVHPEGAFYTWFDYRGAMFQRKLGLRIDHILVSPAMAEALKDVRVDL 236 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 + R +PSDH PV D Sbjct: 237 ETRALERPSDHAPVTAEFDW 256 >gi|330428202|gb|AEC19536.1| putative exodeoxyribonuclease III [Pusillimonas sp. T7-7] Length = 262 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 91/259 (35%), Positives = 137/259 (52%), Gaps = 1/259 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS++ R+ + W++ + + +CLQE K D FP + Y GQK Sbjct: 1 MKLATWNVNSLKVRLPQVLDWLENSPVEALCLQELKLTDDKFPIDAFTEAGYQACWAGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAI++K +I +LPG + D Q R I T +R+ Y P+G + S K Sbjct: 61 TYNGVAIITKVPGTDIQRNLPGFE-DHQQRIIATTLPSPVGDVRVICAYCPNGQAVGSDK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y+ K+ W + Q L+ L GDYN+ P D ++P WE D + R +F Sbjct: 120 YEYKLKWFLALQEWLEQELQRYPRLAILGDYNVAPHNDDVHDPKKWEGDVLVSEPERAAF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 L ++G TD+ R +++WDY ++ +N G+RIDH++LS + ID Sbjct: 180 NALLSLGLTDSFREFEQEEKSFTWWDYRRFAFRRNAGLRIDHVLLSDALKPYCSACVIDK 239 Query: 244 KPRGWTKPSDHTPVIVSLD 262 PR +PSDHTPVI +LD Sbjct: 240 APRNNEQPSDHTPVIATLD 258 >gi|224823708|ref|ZP_03696817.1| exodeoxyribonuclease III Xth [Lutiella nitroferrum 2002] gi|224604163|gb|EEG10337.1| exodeoxyribonuclease III Xth [Lutiella nitroferrum 2002] Length = 257 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 87/260 (33%), Positives = 139/260 (53%), Gaps = 7/260 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS++ R+ + W+ E D++CLQE K + FP +++ Y GQK Sbjct: 1 MRLATWNVNSLKVRLPQVLQWLAETPVDVLCLQELKMDQDAFPLAEIEAAGYRAAWLGQK 60 Query: 64 SYNGVAILSKYQP--IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +YNGVAIL + ++V +PG D + + +R+ Y +G + S Sbjct: 61 TYNGVAILVRDGHSLDDVVPGIPGYDDEQRRVIAATVGG-----VRVICAYFVNGEAVDS 115 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 KY K++W+ R+ + L L GDYNI P D Y+P W++ ++ R Sbjct: 116 PKYPYKLAWLAELERYVADELTRHPSLALLGDYNIAPDDRDVYDPDAWKDKVLCSVPERD 175 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +F++L +G +D+ R + YS+WDY A + +N G+RIDHI++S + I Sbjct: 176 AFRRLIGLGLSDSFRLFNQDEKQYSWWDYRAMMFRRNLGLRIDHILISDALKARATECVI 235 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 D PR W +PSDHTPV+++L Sbjct: 236 DKAPRKWERPSDHTPVVLTL 255 >gi|220911407|ref|YP_002486716.1| exodeoxyribonuclease III Xth [Arthrobacter chlorophenolicus A6] gi|219858285|gb|ACL38627.1| exodeoxyribonuclease III Xth [Arthrobacter chlorophenolicus A6] Length = 268 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 73/266 (27%), Positives = 120/266 (45%), Gaps = 8/266 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+RAR + AW++ ++ D++ +QETK +D NFP+E + + Y + G Sbjct: 1 MKIATWNVNSLRARADRVEAWLQRSDCDVLAIQETKCKDDNFPWELFERMGYEVAHFGVN 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLD----VQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +NGVAI S+ ++ +RI +LY+P+G + Sbjct: 61 QWNGVAIASRVGLEDVERTFLDQPAFGKAGKDPVQEARAMAATCGGVRIWSLYIPNGRSL 120 Query: 120 TSTKYDD--KISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP--IIWENDACF 175 K + + E + GD+NI P D ++ + Sbjct: 121 DDEHMPYKLKWLESLKSHAQSLVTENPEAQVALMGDWNIAPFDDDVWDIDLFVNNGYTHV 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 + R +F + GFTD +R +Y++WDY + K +G+RID ++ S S Sbjct: 181 SPPERAAFHAFETAGFTDVVRPYTPGPGVYTYWDYTQLRFPKKEGMRIDFVLASKALASR 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 + A ID + R SDH PV+V L Sbjct: 241 VTGASIDREERKGKGASDHAPVLVEL 266 >gi|304386652|ref|ZP_07368935.1| exodeoxyribonuclease III [Neisseria meningitidis ATCC 13091] gi|304339271|gb|EFM05348.1| exodeoxyribonuclease III [Neisseria meningitidis ATCC 13091] Length = 256 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 90/260 (34%), Positives = 133/260 (51%), Gaps = 4/260 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + TWNVNS+ R+ + + +N PDI+ LQE K + FP LQ + +H GQK Sbjct: 1 MKITTWNVNSLNVRLPQVQNLLADNPPDILVLQELKLDQDKFPAAALQMMGWHCVWSGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAI+S+ P ++ LP D Q R I AT +R+ N+Y +G + S K Sbjct: 61 TYNGVAIVSRNAPEDVHIGLPALPDDPQRRVIAATVGG----VRVINVYCVNGEALDSPK 116 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K W F + L+ GD+NI P DCY+P W + RQ F Sbjct: 117 FKYKEQWFAALTEFVRDEMTRYGKLVLLGDFNIAPADADCYDPEKWHEKIHCSSVERQWF 176 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + L ++G TD++R H Y+++DY + + G+RIDHI++SP L R+D Sbjct: 177 KNLLDLGLTDSLRQVHPEGAFYTWFDYRGAMFQRKLGLRIDHILVSPAMAEALKDVRVDL 236 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 + R +PSDH PV D Sbjct: 237 ETRALERPSDHAPVTAEFDW 256 >gi|15802160|ref|NP_288182.1| exonuclease III [Escherichia coli O157:H7 EDL933] gi|15831709|ref|NP_310482.1| exonuclease III [Escherichia coli O157:H7 str. Sakai] gi|168749430|ref|ZP_02774452.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4113] gi|168756758|ref|ZP_02781765.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4401] gi|168762180|ref|ZP_02787187.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4501] gi|168770517|ref|ZP_02795524.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4486] gi|168774945|ref|ZP_02799952.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4196] gi|168782171|ref|ZP_02807178.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4076] gi|168788152|ref|ZP_02813159.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC869] gi|168800064|ref|ZP_02825071.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC508] gi|195937435|ref|ZP_03082817.1| exonuclease III [Escherichia coli O157:H7 str. EC4024] gi|208810770|ref|ZP_03252646.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4206] gi|208816750|ref|ZP_03257870.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4045] gi|208821646|ref|ZP_03261966.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4042] gi|209395934|ref|YP_002270819.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4115] gi|217328604|ref|ZP_03444685.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. TW14588] gi|254793367|ref|YP_003078204.1| exonuclease III [Escherichia coli O157:H7 str. TW14359] gi|261227757|ref|ZP_05942038.1| exonuclease III [Escherichia coli O157:H7 str. FRIK2000] gi|261258078|ref|ZP_05950611.1| exonuclease III [Escherichia coli O157:H7 str. FRIK966] gi|291282928|ref|YP_003499746.1| Exodeoxyribonuclease III [Escherichia coli O55:H7 str. CB9615] gi|12515771|gb|AAG56735.1|AE005398_1 exonuclease III [Escherichia coli O157:H7 str. EDL933] gi|13361922|dbj|BAB35878.1| exonuclease III [Escherichia coli O157:H7 str. Sakai] gi|187769420|gb|EDU33264.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4196] gi|188016211|gb|EDU54333.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4113] gi|189000291|gb|EDU69277.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4076] gi|189356216|gb|EDU74635.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4401] gi|189360591|gb|EDU79010.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4486] gi|189367497|gb|EDU85913.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4501] gi|189372068|gb|EDU90484.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC869] gi|189377552|gb|EDU95968.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC508] gi|208725286|gb|EDZ74993.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4206] gi|208731093|gb|EDZ79782.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4045] gi|208741769|gb|EDZ89451.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4042] gi|209157334|gb|ACI34767.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4115] gi|209768548|gb|ACI82586.1| exonuclease III [Escherichia coli] gi|209768550|gb|ACI82587.1| exonuclease III [Escherichia coli] gi|209768552|gb|ACI82588.1| exonuclease III [Escherichia coli] gi|209768554|gb|ACI82589.1| exonuclease III [Escherichia coli] gi|209768556|gb|ACI82590.1| exonuclease III [Escherichia coli] gi|217317951|gb|EEC26378.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. TW14588] gi|254592767|gb|ACT72128.1| exonuclease III [Escherichia coli O157:H7 str. TW14359] gi|290762801|gb|ADD56762.1| Exodeoxyribonuclease III [Escherichia coli O55:H7 str. CB9615] gi|320188437|gb|EFW63099.1| Exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC1212] gi|320641598|gb|EFX10986.1| exonuclease III [Escherichia coli O157:H7 str. G5101] gi|320646958|gb|EFX15791.1| exonuclease III [Escherichia coli O157:H- str. 493-89] gi|320652240|gb|EFX20538.1| exonuclease III [Escherichia coli O157:H- str. H 2687] gi|320657841|gb|EFX25603.1| exonuclease III [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320658415|gb|EFX26109.1| exonuclease III [Escherichia coli O55:H7 str. USDA 5905] gi|320668313|gb|EFX35140.1| exonuclease III [Escherichia coli O157:H7 str. LSU-61] gi|326342117|gb|EGD65898.1| Exodeoxyribonuclease III [Escherichia coli O157:H7 str. 1044] gi|326343669|gb|EGD67431.1| Exodeoxyribonuclease III [Escherichia coli O157:H7 str. 1125] Length = 268 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 78/266 (29%), Positives = 124/266 (46%), Gaps = 8/266 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A ++++ PD+I LQETK D FP E + L Y++ GQK Sbjct: 1 MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 + GVA+L+K PI + PGD+ + Q R I A + + N Y P G Sbjct: 61 GHYGVALLTKETPIAVRRGFPGDEEEAQRRIIMAEIPSPLGNVTVINGYFPQGESRDHPI 120 Query: 124 -YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 + K + + + L+ E P++ GD NI P + + F Sbjct: 121 KFPAKAQFYQNLQNYLETELKRENPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ ++L + G D R + +S++DY + + N+G+RID ++ S Sbjct: 181 PEEREWMERLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAEC 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 ID + R KPSDH PV + Sbjct: 241 CVETGIDYEIRSMEKPSDHAPVWATF 266 >gi|288935952|ref|YP_003440011.1| exodeoxyribonuclease III [Klebsiella variicola At-22] gi|288890661|gb|ADC58979.1| exodeoxyribonuclease III [Klebsiella variicola At-22] Length = 268 Score = 204 bits (519), Expect = 1e-50, Method: Composition-based stats. Identities = 81/266 (30%), Positives = 124/266 (46%), Gaps = 8/266 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H LAA ++++ PD+I LQETK D FP E + L Y++ GQK Sbjct: 1 MKFVSFNINGLRARPHQLAAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122 + GVA+L+K PI + P D + Q R I A + + N Y P G T Sbjct: 61 GHYGVALLTKDTPIAVRRGFPDDGEEAQRRIIMAEIPSPFGNVTVINGYFPQGESRDHET 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K ++ + + L E P++ GD NI P + + F Sbjct: 121 KFPAKAAFYQNLQNYLETELNKENPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +L G D R + +S++DY + + N+G+RID ++ S Sbjct: 181 PEEREWMDRLLGWGLVDTWRQANPDNQEHFSWFDYRSKGFDDNRGLRIDLLLASQPLAQR 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 ID + RG KPSDH PV + Sbjct: 241 CVETGIDYEIRGMEKPSDHAPVWATF 266 >gi|134296326|ref|YP_001120061.1| exodeoxyribonuclease III [Burkholderia vietnamiensis G4] gi|134139483|gb|ABO55226.1| Exodeoxyribonuclease III [Burkholderia vietnamiensis G4] Length = 271 Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 84/256 (32%), Positives = 134/256 (52%), Gaps = 1/256 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ R ++ W+ ++ D++CLQE K D+ +P L+++ Y GQK Sbjct: 14 MKIATWNVNSLNVRKQHVLDWLAQSGADVLCLQELKLPDEKYPRADLEAVGYRSWFTGQK 73 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAIL + + + ++ + + + +RI + Y P+G S K Sbjct: 74 TYNGVAILVRDT-LAVDESDVVRNIPGFDDPQQRVVAVTVEGVRIVSAYFPNGQAPDSDK 132 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W+ + L+ L GDYNI P+ D ++P WE + + R F Sbjct: 133 FLYKMQWLDALHAWLGAELQRYPKLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHF 192 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 KL +GF DA R +++WDY ++ +N G+RIDHI+LSP + S +D Sbjct: 193 AKLLELGFVDAFRRFEQPEKTFTWWDYRMFAFRRNAGLRIDHILLSPALAATCTSCEVDR 252 Query: 244 KPRGWTKPSDHTPVIV 259 PR W +PSDHTPV+ Sbjct: 253 VPRTWEQPSDHTPVVA 268 >gi|260768888|ref|ZP_05877822.1| exodeoxyribonuclease III [Vibrio furnissii CIP 102972] gi|260616918|gb|EEX42103.1| exodeoxyribonuclease III [Vibrio furnissii CIP 102972] gi|315180582|gb|ADT87496.1| exodeoxyribonuclease III [Vibrio furnissii NCTC 11218] Length = 269 Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 81/267 (30%), Positives = 131/267 (49%), Gaps = 9/267 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V ++N+N +RAR+H L A I ++ PD+I LQE K D+ FP E ++++ Y + GQK Sbjct: 1 MKVISFNINGLRARLHQLQAVIDKHQPDVIGLQEIKVHDEAFPLEDVEAMGYKVYFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121 ++ GVA+L K P+E+ P +D + + Q + + N Y P G+ I+ Sbjct: 61 AHYGVAMLCKQTPLEVRKGFPTDNDDHQKRMIMATFLNEQGQKVTVMNGYFPQGDNISHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175 TK+ K + + + + ++ LI GD NI P + F Sbjct: 121 TKFPYKRQFYADLMTYLNDYHTKDDQLIVMGDINISPIDLDIGIGEPNRQRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E RQ + L + GF D R H + +S++DY + + N+G+RID I+ +P + Sbjct: 181 QPEERQWLKTLLDWGFEDTFRKLHPAVNDQFSWFDYRSKGFDDNRGLRIDVILATPSLAA 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261 A ID + RG KPSDH P+ Sbjct: 241 TCVEAGIDYELRGIEKPSDHAPIWSVF 267 >gi|284921668|emb|CBG34740.1| exodeoxyribonuclease III [Escherichia coli 042] Length = 268 Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 79/266 (29%), Positives = 124/266 (46%), Gaps = 8/266 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A ++++ PD+I LQETK D FP E + L Y++ GQK Sbjct: 1 MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 + GVA+L+K PI + PGDD + Q R I A + + N Y P G Sbjct: 61 GHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSPLGNVTVINGYFPQGESRDHPI 120 Query: 124 -YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 + K + + + L+ E P++ GD NI P + + F Sbjct: 121 KFPAKAQFYQNLQNYLETELKRENPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ ++L + G D R + +S++DY + + N+G+RID ++ S Sbjct: 181 PEEREWMERLMSWGLVDTFRQANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAEC 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 ID + R KPSDH PV + Sbjct: 241 CVETGIDYEIRSMEKPSDHAPVWATF 266 >gi|300938914|ref|ZP_07153616.1| exodeoxyribonuclease III [Escherichia coli MS 21-1] gi|300456174|gb|EFK19667.1| exodeoxyribonuclease III [Escherichia coli MS 21-1] Length = 272 Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 79/268 (29%), Positives = 125/268 (46%), Gaps = 8/268 (2%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + ++N+N +RAR H L A ++++ PD+I LQETK D FP E + L Y++ G Sbjct: 3 ATMKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHG 62 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 QK + GVA+L+K PI + PGDD + Q R I A + + N Y P G Sbjct: 63 QKGHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSPLGNVTVINGYFPQGESRDH 122 Query: 122 TK-YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDAC 174 + K + + + L+ E P++ GD NI P + + Sbjct: 123 PIKFPAKAQFYQNLQNYLETELKRENPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCS 182 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 F E R+ ++L + G D R + +S++DY + + N+G+RID ++ S Sbjct: 183 FLPEEREWMERLMSWGLVDTFRHANPQTADRFSWFDYRSKVFDDNRGLRIDLLLASQPLA 242 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSL 261 ID + R KPSDH PV + Sbjct: 243 ECCVETGIDYEIRSMEKPSDHAPVWATF 270 >gi|15607568|ref|NP_214941.1| exodeoxyribonuclease III protein [Mycobacterium tuberculosis H37Rv] gi|15839814|ref|NP_334851.1| exodeoxyribonuclease III [Mycobacterium tuberculosis CDC1551] gi|31791605|ref|NP_854098.1| exodeoxyribonuclease III protein [Mycobacterium bovis AF2122/97] gi|121636341|ref|YP_976564.1| putative exodeoxyribonuclease III protein xthA [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148660192|ref|YP_001281715.1| exodeoxyribonuclease III [Mycobacterium tuberculosis H37Ra] gi|148821623|ref|YP_001286377.1| exodeoxyribonuclease III protein xthA (exonuclease III) [Mycobacterium tuberculosis F11] gi|167970756|ref|ZP_02553033.1| exodeoxyribonuclease III protein xthA (exonuclease III) [Mycobacterium tuberculosis H37Ra] gi|215402179|ref|ZP_03414360.1| exodeoxyribonuclease III protein xthA (exonuclease III) [Mycobacterium tuberculosis 02_1987] gi|215409943|ref|ZP_03418751.1| exodeoxyribonuclease III protein xthA (exonuclease III) [Mycobacterium tuberculosis 94_M4241A] gi|215425649|ref|ZP_03423568.1| exodeoxyribonuclease III protein xthA (exonuclease III) [Mycobacterium tuberculosis T92] gi|215429249|ref|ZP_03427168.1| exodeoxyribonuclease III protein xthA (exonuclease III) [Mycobacterium tuberculosis EAS054] gi|215444523|ref|ZP_03431275.1| exodeoxyribonuclease III protein xthA (exonuclease III) [Mycobacterium tuberculosis T85] gi|218752060|ref|ZP_03530856.1| exodeoxyribonuclease III protein xthA (exonuclease III) [Mycobacterium tuberculosis GM 1503] gi|219556248|ref|ZP_03535324.1| exodeoxyribonuclease III protein xthA (exonuclease III) [Mycobacterium tuberculosis T17] gi|224988813|ref|YP_002643500.1| putative exodeoxyribonuclease III protein [Mycobacterium bovis BCG str. Tokyo 172] gi|253797351|ref|YP_003030352.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis KZN 1435] gi|254230777|ref|ZP_04924104.1| exodeoxyribonuclease III protein xthA (exonuclease III) [Mycobacterium tuberculosis C] gi|254363391|ref|ZP_04979437.1| exodeoxyribonuclease III protein xthA (exonuclease III) [Mycobacterium tuberculosis str. Haarlem] gi|254549374|ref|ZP_05139821.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|260185294|ref|ZP_05762768.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis CPHL_A] gi|260199425|ref|ZP_05766916.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis T46] gi|260203577|ref|ZP_05771068.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis K85] gi|289441807|ref|ZP_06431551.1| exodeoxyribonuclease III [Mycobacterium tuberculosis T46] gi|289445967|ref|ZP_06435711.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis CPHL_A] gi|289552676|ref|ZP_06441886.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis KZN 605] gi|289568343|ref|ZP_06448570.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis T17] gi|289573012|ref|ZP_06453239.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis K85] gi|289744123|ref|ZP_06503501.1| exodeoxyribonuclease III protein [Mycobacterium tuberculosis 02_1987] gi|289748911|ref|ZP_06508289.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis T92] gi|289752456|ref|ZP_06511834.1| exodeoxyribonuclease III protein [Mycobacterium tuberculosis EAS054] gi|289756500|ref|ZP_06515878.1| exodeoxyribonuclease III protein [Mycobacterium tuberculosis T85] gi|289760543|ref|ZP_06519921.1| exodeoxyribonuclease III protein xthA (exonuclease III) [Mycobacterium tuberculosis GM 1503] gi|294995932|ref|ZP_06801623.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis 210] gi|297632911|ref|ZP_06950691.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis KZN 4207] gi|297729886|ref|ZP_06959004.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis KZN R506] gi|298523904|ref|ZP_07011313.1| exodeoxyribonuclease III protein XthA [Mycobacterium tuberculosis 94_M4241A] gi|306774523|ref|ZP_07412860.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis SUMu001] gi|306779272|ref|ZP_07417609.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis SUMu002] gi|306783061|ref|ZP_07421383.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis SUMu003] gi|306787428|ref|ZP_07425750.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis SUMu004] gi|306791980|ref|ZP_07430282.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis SUMu005] gi|306796167|ref|ZP_07434469.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis SUMu006] gi|306966432|ref|ZP_07479093.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis SUMu009] gi|306970627|ref|ZP_07483288.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis SUMu010] gi|307078353|ref|ZP_07487523.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis SUMu011] gi|307082911|ref|ZP_07492024.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis SUMu012] gi|313657215|ref|ZP_07814095.1| exodeoxyribonuclease III [Mycobacterium tuberculosis KZN V2475] gi|1817693|emb|CAB06567.1| PROBABLE EXODEOXYRIBONUCLEASE III PROTEIN XTHA (EXONUCLEASE III) (EXO III) (AP ENDONUCLEASE VI) [Mycobacterium tuberculosis H37Rv] gi|13879945|gb|AAK44665.1| exodeoxyribonuclease III [Mycobacterium tuberculosis CDC1551] gi|31617191|emb|CAD93298.1| PROBABLE EXODEOXYRIBONUCLEASE III PROTEIN XTHA (EXONUCLEASE III) (EXO III) (AP ENDONUCLEASE VI) [Mycobacterium bovis AF2122/97] gi|121491988|emb|CAL70451.1| Probable exodeoxyribonuclease III protein xthA [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|124599836|gb|EAY58846.1| exodeoxyribonuclease III protein xthA (exonuclease III) [Mycobacterium tuberculosis C] gi|134148905|gb|EBA40950.1| exodeoxyribonuclease III protein xthA (exonuclease III) [Mycobacterium tuberculosis str. Haarlem] gi|148504344|gb|ABQ72153.1| exodeoxyribonuclease III [Mycobacterium tuberculosis H37Ra] gi|148720150|gb|ABR04775.1| exodeoxyribonuclease III protein xthA (exonuclease III) [Mycobacterium tuberculosis F11] gi|224771926|dbj|BAH24732.1| putative exodeoxyribonuclease III protein [Mycobacterium bovis BCG str. Tokyo 172] gi|253318854|gb|ACT23457.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis KZN 1435] gi|289414726|gb|EFD11966.1| exodeoxyribonuclease III [Mycobacterium tuberculosis T46] gi|289418925|gb|EFD16126.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis CPHL_A] gi|289437308|gb|EFD19801.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis KZN 605] gi|289537443|gb|EFD42021.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis K85] gi|289542096|gb|EFD45745.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis T17] gi|289684651|gb|EFD52139.1| exodeoxyribonuclease III protein [Mycobacterium tuberculosis 02_1987] gi|289689498|gb|EFD56927.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis T92] gi|289693043|gb|EFD60472.1| exodeoxyribonuclease III protein [Mycobacterium tuberculosis EAS054] gi|289708049|gb|EFD72065.1| exodeoxyribonuclease III protein xthA (exonuclease III) [Mycobacterium tuberculosis GM 1503] gi|289712064|gb|EFD76076.1| exodeoxyribonuclease III protein [Mycobacterium tuberculosis T85] gi|298493698|gb|EFI28992.1| exodeoxyribonuclease III protein XthA [Mycobacterium tuberculosis 94_M4241A] gi|308216872|gb|EFO76271.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis SUMu001] gi|308327716|gb|EFP16567.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis SUMu002] gi|308332078|gb|EFP20929.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis SUMu003] gi|308335893|gb|EFP24744.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis SUMu004] gi|308339470|gb|EFP28321.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis SUMu005] gi|308343335|gb|EFP32186.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis SUMu006] gi|308355828|gb|EFP44679.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis SUMu009] gi|308359748|gb|EFP48599.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis SUMu010] gi|308363690|gb|EFP52541.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis SUMu011] gi|308367342|gb|EFP56193.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis SUMu012] gi|323721099|gb|EGB30161.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis CDC1551A] gi|326902253|gb|EGE49186.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis W-148] gi|328457137|gb|AEB02560.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis KZN 4207] Length = 291 Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 78/266 (29%), Positives = 126/266 (47%), Gaps = 7/266 (2%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 ++ +ATWNVNSIR R+ + W+ + D++ +QETK D FP L L Y + G Sbjct: 23 LLRLATWNVNSIRTRLDRVLDWLGRADVDVLAMQETKCPDGQFPALPLFELGYDVAHVGF 82 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-----TQTLRIGNLYLPHGN 117 +NGVAI S+ ++ G + AT +R+ +LY+P+G Sbjct: 83 DQWNGVAIASRVGLDDVRVGFDGQPSWSGKPEVAATTEARALGATCGGIRVWSLYVPNGR 142 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEE--PLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + Y K+ W+ A L + P+ GD+NI P D ++ + Sbjct: 143 ALDDPHYTYKLDWLAALRDTAEGWLRDDPAAPIALMGDWNIAPTDDDVWSTEFFAGCTHV 202 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 + R++F + + FTD +R +Y++WDY + K +G+RID I+ SP + Sbjct: 203 SEPERKAFNAIVDAQFTDVVRPFTPGPGVYTYWDYTQLRFPKKQGMRIDFILGSPALAAR 262 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 + A+I + R PSDH PV+V L Sbjct: 263 VMDAQIVREERKGKAPSDHAPVLVDL 288 >gi|161870674|ref|YP_001599847.1| exodeoxyribonuclease III [Neisseria meningitidis 053442] gi|161596227|gb|ABX73887.1| exodeoxyribonuclease III [Neisseria meningitidis 053442] gi|319411070|emb|CBY91471.1| exodeoxyribonuclease III (exonuclease III; EXO III) [Neisseria meningitidis WUE 2594] Length = 256 Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 91/260 (35%), Positives = 134/260 (51%), Gaps = 4/260 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + TWNVNS+ R+ + + +N PDI+ LQE K + FP LQ + +H GQK Sbjct: 1 MKITTWNVNSLNVRLPQVQNLLADNPPDILVLQELKLDQDKFPAAALQMMGWHCVWSGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAI+S+ P ++ LP D Q R I AT +R+ N+Y +G + S K Sbjct: 61 TYNGVAIVSRNAPEDVHIGLPALPDDPQRRVIAATVGG----VRVINVYCVNGEALDSPK 116 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K W F + L+ GD+NI P DCY+P W + RQ F Sbjct: 117 FKYKEQWFAALTEFVRDEMTRYGKLVLLGDFNIAPADADCYDPEKWHEKIHCSSVERQWF 176 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q L ++G TD++R H Y+++DY + + G+RIDHI++SP + L R+D Sbjct: 177 QNLLDLGLTDSLRQVHPEGAFYTWFDYRGAMFQRKLGLRIDHILVSPAMAAALKDVRVDL 236 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 + R +PSDH PV D Sbjct: 237 ETRALERPSDHAPVTAEFDW 256 >gi|301632179|ref|XP_002945168.1| PREDICTED: exodeoxyribonuclease III-like [Xenopus (Silurana) tropicalis] Length = 263 Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 92/258 (35%), Positives = 135/258 (52%), Gaps = 1/258 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + TWN+NS+ R+ + W+ N D + LQE K D FP + + Y GQK Sbjct: 1 MRITTWNINSLAVRLPQVLDWLAANPVDALALQELKLTDDKFPADAFAAAGYRAVVFGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAILS+Y ++V ++PG D QAR I AT T LR+ N Y +G S K Sbjct: 61 TYNGVAILSRYPMTDVVRNIPGF-ADEQARVIAATLDTPTGPLRLVNGYFVNGQAPGSDK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W++ + L L L GD+N+ P+ D ++P T + R F Sbjct: 120 FAYKMRWLQALQDWLRSELALHPRLALVGDFNVAPEDRDSHDPEGLRETIHHTTQERLHF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q L +G DA R +S+WDY + KN+G+RIDHI++S L+ + +D Sbjct: 180 QALLGLGLVDAFRLFVQPEKSFSWWDYRMLGFQKNRGLRIDHILVSQMLAPLVSACAVDR 239 Query: 244 KPRGWTKPSDHTPVIVSL 261 PR +PSDH PV+V+L Sbjct: 240 LPRKNKQPSDHAPVVVTL 257 >gi|161503598|ref|YP_001570710.1| exonuclease III [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160864945|gb|ABX21568.1| hypothetical protein SARI_01677 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 268 Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 77/268 (28%), Positives = 122/268 (45%), Gaps = 8/268 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A ++++ PD+I LQETK D+ FP E + L Y++ GQK Sbjct: 1 MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDEMFPLEEVAKLGYNVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122 + GVA+L+K PI + P D + Q R I A + + N Y P G Sbjct: 61 GHYGVALLTKATPISVRRGFPDDGEEAQRRIIMAEIPSPLGNITVINGYFPQGESRDHPL 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + + + L+ + P++ GD NI P + + F Sbjct: 121 KFPAKAQFYQNLQNYLETELKCDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +L G D R + +S++DY + + N+G+RID ++ S Sbjct: 181 PEEREWMSRLLKWGLVDTFRQANPETVDKFSWFDYRSKGFVDNRGLRIDLLLASRPLAER 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 ID R KPSDH PV + + Sbjct: 241 CAETGIDYDIRSMEKPSDHAPVWATFRV 268 >gi|218705247|ref|YP_002412766.1| exonuclease III [Escherichia coli UMN026] gi|293405248|ref|ZP_06649240.1| exodeoxyribonuclease III [Escherichia coli FVEC1412] gi|298380891|ref|ZP_06990490.1| exodeoxyribonuclease III [Escherichia coli FVEC1302] gi|218432344|emb|CAR13234.1| exonuclease III [Escherichia coli UMN026] gi|291427456|gb|EFF00483.1| exodeoxyribonuclease III [Escherichia coli FVEC1412] gi|298278333|gb|EFI19847.1| exodeoxyribonuclease III [Escherichia coli FVEC1302] gi|323186929|gb|EFZ72247.1| exodeoxyribonuclease III [Escherichia coli RN587/1] Length = 268 Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 79/266 (29%), Positives = 124/266 (46%), Gaps = 8/266 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A ++++ PD+I LQETK D FP E + L Y++ GQK Sbjct: 1 MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 + GVA+L+K PI + PGDD + Q R I A + + N Y P G Sbjct: 61 GHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSTLGNVTVINGYFPQGESRDHPI 120 Query: 124 -YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 + K + + + L+ E P++ GD NI P + + F Sbjct: 121 KFPAKAQFYQNLQNYLETELKRENPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ ++L + G D R + +S++DY + + N+G+RID ++ S Sbjct: 181 PEEREWMERLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAEC 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 ID + R KPSDH PV + Sbjct: 241 CVETGIDYEIRSMEKPSDHAPVWATF 266 >gi|163841804|ref|YP_001626209.1| exodeoxyribonuclease III [Renibacterium salmoninarum ATCC 33209] gi|162955280|gb|ABY24795.1| exodeoxyribonuclease III [Renibacterium salmoninarum ATCC 33209] Length = 267 Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 81/266 (30%), Positives = 129/266 (48%), Gaps = 8/266 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+RAR + W++ + D++ +QETK +D+NFP+E ++ Y + G Sbjct: 1 MKIATWNVNSLRARADRVEDWLRRTDIDVLAIQETKCKDENFPWELFENNGYEVAHFGFS 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT----FTINTQTLRIGNLYLPHGNPI 119 +NGVAI SK ++ PG + +R+ +LY+P+G + Sbjct: 61 QWNGVAIASKVGLDDVERTFPGQPAFGKPGVEPEQEGRAIAATCGGVRVWSLYVPNGRAL 120 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIF--AGDYNIIPQPHDCYNPIIWE--NDACF 175 K+ W++ A L + GD+NI PQ D ++ + F Sbjct: 121 DDPHMPYKLEWLRVLNEEAKGWLAKDPNAQIALVGDWNIAPQDDDVWDVKYFIDEGLTHF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 + R +FQ + GFTD +R +H +Y++WDY + K +G+RID IM SP + Sbjct: 181 SAPERAAFQAFEAAGFTDVVRPSHPGPGVYTYWDYKQLRFPKKEGMRIDFIMASPALAAR 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 + ID + R SDH PVI L Sbjct: 241 VVHTEIDREERKGKGASDHAPVIAEL 266 >gi|126662905|ref|ZP_01733904.1| exodeoxyribonuclease III [Flavobacteria bacterium BAL38] gi|126626284|gb|EAZ96973.1| exodeoxyribonuclease III [Flavobacteria bacterium BAL38] Length = 253 Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 79/263 (30%), Positives = 126/263 (47%), Gaps = 14/263 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY---HIET 59 + + ++NVN IRA I W+++ NPD+ICLQE K ++ P +++ Y + + Sbjct: 1 MKIISYNVNGIRAAISKGFLEWLQQANPDVICLQEIKATEEQIPKLEIEAAGYPYQYYFS 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GVA+LSK +P IV +D + R + F L + +LYLP G I Sbjct: 61 AEKKGYSGVAVLSKIEPKTIVFGTGIKHMDFEGRNLRVDFD----KLSVMSLYLPSGTNI 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 D K ++ F + + + L+ GDYNI + D ++PI + F E Sbjct: 117 DR--LDYKFQYMAEFQLYVDELKKEIPNLVICGDYNICHEAIDIHDPIRNAKVSGFLPEE 174 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R GF D R + + YS+W Y A++ + NKG RID+ + + + A Sbjct: 175 RAWLDGFLKNGFVDTFRHLNKEPNNYSWWSYRANARNNNKGWRIDYCLATESLKEKIQRA 234 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 I + K SDH PV+V + Sbjct: 235 LILPEA----KHSDHCPVLVEIK 253 >gi|293415066|ref|ZP_06657709.1| exodeoxyribonuclease III [Escherichia coli B185] gi|291432714|gb|EFF05693.1| exodeoxyribonuclease III [Escherichia coli B185] Length = 268 Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 79/266 (29%), Positives = 124/266 (46%), Gaps = 8/266 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A ++++ PD+I LQETK D FP E + L Y++ GQK Sbjct: 1 MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 + GVA+L+K PI + PGDD + Q R I A + + N Y P G Sbjct: 61 GHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSPLGNVTVINGYFPQGESRDHPI 120 Query: 124 -YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 + K + + + L+ E P++ GD NI P + + F Sbjct: 121 KFPAKAQFYQNLQNYLETELKRENPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ ++L + G D R + +S++DY + + N+G+RID ++ S Sbjct: 181 PEEREWMERLMSWGLVDTFRHANPQTAERFSWFDYRSKGFDDNRGLRIDLLLASQPLAEC 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 ID + R KPSDH PV + Sbjct: 241 CVETGIDYEIRSMEKPSDHAPVWATF 266 >gi|162138430|ref|YP_540952.2| exonuclease III [Escherichia coli UTI89] gi|170683141|ref|YP_001743499.1| exonuclease III [Escherichia coli SMS-3-5] gi|215486966|ref|YP_002329397.1| exonuclease III [Escherichia coli O127:H6 str. E2348/69] gi|218558617|ref|YP_002391530.1| exonuclease III [Escherichia coli S88] gi|218689690|ref|YP_002397902.1| exonuclease III [Escherichia coli ED1a] gi|293410066|ref|ZP_06653642.1| exodeoxyribonuclease III [Escherichia coli B354] gi|306814999|ref|ZP_07449155.1| exonuclease III [Escherichia coli NC101] gi|312966949|ref|ZP_07781167.1| exodeoxyribonuclease III [Escherichia coli 2362-75] gi|331663230|ref|ZP_08364140.1| exodeoxyribonuclease III [Escherichia coli TA143] gi|170520859|gb|ACB19037.1| exodeoxyribonuclease III [Escherichia coli SMS-3-5] gi|215265038|emb|CAS09425.1| exonuclease III [Escherichia coli O127:H6 str. E2348/69] gi|218365386|emb|CAR03109.1| exonuclease III [Escherichia coli S88] gi|218427254|emb|CAR08144.2| exonuclease III [Escherichia coli ED1a] gi|222033502|emb|CAP76243.1| exodeoxyribonuclease III [Escherichia coli LF82] gi|291470534|gb|EFF13018.1| exodeoxyribonuclease III [Escherichia coli B354] gi|294494019|gb|ADE92775.1| exodeoxyribonuclease III [Escherichia coli IHE3034] gi|305851647|gb|EFM52100.1| exonuclease III [Escherichia coli NC101] gi|307626765|gb|ADN71069.1| exonuclease III [Escherichia coli UM146] gi|312288413|gb|EFR16315.1| exodeoxyribonuclease III [Escherichia coli 2362-75] gi|312946349|gb|ADR27176.1| exonuclease III [Escherichia coli O83:H1 str. NRG 857C] gi|320194541|gb|EFW69172.1| Exodeoxyribonuclease III [Escherichia coli WV_060327] gi|323952256|gb|EGB48129.1| exodeoxyribonuclease III [Escherichia coli H252] gi|323956518|gb|EGB52259.1| exodeoxyribonuclease III [Escherichia coli H263] gi|331059029|gb|EGI31006.1| exodeoxyribonuclease III [Escherichia coli TA143] Length = 268 Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 79/266 (29%), Positives = 124/266 (46%), Gaps = 8/266 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A ++++ PD+I LQETK D FP E + L Y++ GQK Sbjct: 1 MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 + GVA+L+K PI + PGDD + Q R I A + + N Y P G Sbjct: 61 GHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSPLGNVTVINGYFPQGESRDHPI 120 Query: 124 -YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 + K + + + L+ E P++ GD NI P + + F Sbjct: 121 KFPAKAQFYQNLQNYLETELKRENPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ ++L + G D R + +S++DY + + N+G+RID ++ S Sbjct: 181 PEEREWMERLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAEC 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 ID + R KPSDH PV + Sbjct: 241 CVETGIDYEIRSMEKPSDHAPVWATF 266 >gi|284993327|ref|YP_003411882.1| exodeoxyribonuclease III Xth [Geodermatophilus obscurus DSM 43160] gi|284066573|gb|ADB77511.1| exodeoxyribonuclease III Xth [Geodermatophilus obscurus DSM 43160] Length = 264 Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 75/262 (28%), Positives = 132/262 (50%), Gaps = 4/262 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSIR R + AW++ ++ D++ LQETK D FP L Y + G Sbjct: 1 MRIATWNVNSIRTRADRVVAWLQRSDVDVLALQETKCRDDQFPESCFTDLGYQVAHVGHS 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGD--DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +NGVA+LS+ ++ PG + + +R+ +LY+P+G +T Sbjct: 61 QWNGVALLSRVGLEDVEVAFPGQPGFGNPEPAVEARALAATCGGVRVWSLYVPNGRTLTD 120 Query: 122 TKYDDKISWIKRFLRFASQRL--ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 Y+ K+ W+ A+ L + + GD+NI PQ D ++ ++ + + Sbjct: 121 PHYEYKLRWLGALRTAAAGWLAEDGGAQVALVGDWNIAPQDDDVWDVRVFAHSTHVSEPE 180 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R +F+ + + G+ D +R ++++WDY +++ +G+RID ++ SP + +A Sbjct: 181 RAAFRAIVDAGYADVVRPHTPGPGVFTYWDYTQLRFARREGMRIDFVLGSPALAVRVTNA 240 Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261 ID + R SDH PV+V L Sbjct: 241 LIDRQERKGKGASDHAPVVVDL 262 >gi|218548682|ref|YP_002382473.1| exonuclease III [Escherichia fergusonii ATCC 35469] gi|218356223|emb|CAQ88840.1| exonuclease III [Escherichia fergusonii ATCC 35469] gi|324113497|gb|EGC07472.1| exodeoxyribonuclease III [Escherichia fergusonii B253] Length = 268 Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 77/266 (28%), Positives = 123/266 (46%), Gaps = 8/266 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A ++++ PD+I LQETK D FP E + L Y++ GQK Sbjct: 1 MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 + GVA+L+K PI + PGD + Q R I A + + N Y P G Sbjct: 61 GHYGVALLTKETPIAVRRGFPGDGEEAQRRIIMAEIPSPLGNVTVINGYFPQGESRDHPI 120 Query: 124 -YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 + K + + + L+ + P++ GD NI P + + F Sbjct: 121 KFPAKAQFYQNLQNYLETELKRDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ ++L + G D R + +S++DY + + N+G+RID ++ S Sbjct: 181 PEEREWMERLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAEC 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 ID + R KPSDH PV + Sbjct: 241 CVETGIDYEIRSMEKPSDHAPVWATF 266 >gi|311899750|dbj|BAJ32158.1| putative exodeoxyribonuclease III [Kitasatospora setae KM-6054] Length = 270 Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 75/269 (27%), Positives = 118/269 (43%), Gaps = 8/269 (2%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 V +ATWN+NS+ AR+ L W++ PD++CLQE K FP E + L Y G Sbjct: 2 TVRIATWNINSVTARLPKLLEWLESAAPDVLCLQELKCATDAFPAEAVAELGYESAAHGD 61 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI--------NTQTLRIGNLYLP 114 +NGVA+LS+ ++V LP A + +R+ ++Y+P Sbjct: 62 GRWNGVALLSRIGLADVVRDLPAQPGYRADDADPAEAPVVEPRAIAATCGPVRVWSVYVP 121 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 +G + Y K+ W+ P GD+N+ P D Y+ + Sbjct: 122 NGREVDHAHYRYKLEWMAALRDAVRDDAAGGRPFAVLGDFNVAPTDEDVYDLAAFAGLTH 181 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 T R + L+ +G D + Y+FWDY A ++ KN+G+RID + Sbjct: 182 VTAPERATLAALRELGLRDVVPRPLKYDRPYTFWDYRALAFPKNRGMRIDLTYANEPFAD 241 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + +D + R SDH PV+V LD+ Sbjct: 242 AVTDTYVDREARKGKGTSDHAPVVVDLDL 270 >gi|281178820|dbj|BAI55150.1| exonuclease III [Escherichia coli SE15] gi|330911554|gb|EGH40064.1| exodeoxyribonuclease 3 [Escherichia coli AA86] Length = 268 Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 79/266 (29%), Positives = 124/266 (46%), Gaps = 8/266 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A ++++ PD+I LQETK D FP E + L Y++ GQK Sbjct: 1 MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 + GVA+L+K PI + PGDD + Q R I A + + N Y P G Sbjct: 61 GHYGVALLTKETPISVRRGFPGDDEEAQRRIIMAEIPSPLGNITVINGYFPQGESRDHPI 120 Query: 124 -YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 + K + + + L+ E P++ GD NI P + + F Sbjct: 121 KFPAKAQFYQNLQNYLETELKRENPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ ++L + G D R + +S++DY + + N+G+RID ++ S Sbjct: 181 PEEREWMERLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAEC 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 ID + R KPSDH PV + Sbjct: 241 CVETGIDYEIRSMEKPSDHAPVWATF 266 >gi|254672519|emb|CBA06061.1| exodeoxyribonuclease III [Neisseria meningitidis alpha275] gi|254673406|emb|CBA08729.1| exodeoxyribonuclease III [Neisseria meningitidis alpha275] gi|308388602|gb|ADO30922.1| exodeoxyribonuclease III [Neisseria meningitidis alpha710] gi|325130865|gb|EGC53597.1| exodeoxyribonuclease III [Neisseria meningitidis OX99.30304] gi|325136967|gb|EGC59564.1| exodeoxyribonuclease III [Neisseria meningitidis M0579] gi|325202788|gb|ADY98242.1| exodeoxyribonuclease III [Neisseria meningitidis M01-240149] gi|325208783|gb|ADZ04235.1| exodeoxyribonuclease III [Neisseria meningitidis NZ-05/33] Length = 256 Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 90/260 (34%), Positives = 134/260 (51%), Gaps = 4/260 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + TWNVNS+ R+ + + +N PDI+ LQE K + FP LQ + +H GQK Sbjct: 1 MKITTWNVNSLNVRLPQVQNLLADNPPDILVLQELKLDQDKFPAAALQMMGWHCVWSGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAI+S+ P ++ LP D Q R I AT +R+ N+Y +G + S K Sbjct: 61 TYNGVAIVSRNAPEDVHIGLPALPDDPQRRVIAATVGG----VRVINVYCVNGEALDSPK 116 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K W F + L+ GD+NI P DCY+P W + RQ F Sbjct: 117 FKYKEQWFAALTEFVRDEMTRYGKLVLLGDFNIAPADADCYDPEKWHEKIHCSSVERQWF 176 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + L ++G TD++R H Y+++DY + + G+RIDHI++SP + L R+D Sbjct: 177 KNLLDLGLTDSLRQVHPEGAFYTWFDYRGAMFQRKLGLRIDHILVSPAMAAALKDVRVDL 236 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 + R +PSDH PV D Sbjct: 237 ETRALERPSDHAPVTAEFDW 256 >gi|330953392|gb|EGH53652.1| exonuclease III [Pseudomonas syringae Cit 7] Length = 270 Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 89/269 (33%), Positives = 134/269 (49%), Gaps = 11/269 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +RAR H LAA I ++ PD+I LQETK D+ FP +++L YH+ GQK Sbjct: 1 MKIVSFNINGLRARPHQLAALIDKHQPDVIGLQETKVSDEQFPQAEVEALGYHVHFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122 + GVA+LS+ P+ + GDD + Q RFI T+ N Q + I N Y P G Sbjct: 61 GHYGVALLSRNAPLALHKGFEGDDEESQKRFIWGTYADSNGQPVTIMNGYFPQGESRDHP 120 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175 K+ K + + ++PLI GD NI PQ D + F Sbjct: 121 TKFPAKQRFYENLQTLLEGHFSNDQPLIVMGDVNISPQDCDIGIGADNAKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232 E R+ ++L+N G D+ R + +S++DY + + +G+RID IM S Sbjct: 181 LPEEREWMERLKNWGLVDSFRHLYPEVVDRFSWFDYRSRGFEDEPKRGLRIDLIMTSTGL 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + A +D RG KPSDH P+ + L Sbjct: 241 QPRIKEAGVDYDLRGMEKPSDHAPIWLEL 269 >gi|145299881|ref|YP_001142722.1| exodeoxyribonuclease III [Aeromonas salmonicida subsp. salmonicida A449] gi|142852653|gb|ABO90974.1| exodeoxyribonuclease III [Aeromonas salmonicida subsp. salmonicida A449] Length = 268 Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats. Identities = 80/267 (29%), Positives = 132/267 (49%), Gaps = 9/267 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +RAR+H L A I ++ PD+I LQE K D+ FP ++++ YH+E GQK Sbjct: 1 MKIISFNINGLRARLHQLQAIIDKHQPDVIGLQEIKVHDEAFPLADVEAMGYHVEFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLD-VQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121 ++ GVAI+SK +P+E+ P D D + + + +++ N Y P G Sbjct: 61 AHYGVAIMSKQKPVEVQKGFPTDPEDAQRRMIMATFKREDGSLIKVMNGYFPQGENQDHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175 TK+ K + + + + L+ GD NI P + E F Sbjct: 121 TKFPAKQKFYENLQHYLETHHTPNDQLVLIGDVNISPTDLDIGIGEANRKRWLREGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 R+ ++L+ G TD RA + T +S++DY + + +N+G+RID IM S Sbjct: 181 LPIEREWMERLKGFGLTDTFRAANPTECERFSWFDYRSKGFDENRGLRIDLIMASDALKD 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261 + ID + RG KPSDH P+ + Sbjct: 241 TVTETGIDYELRGIEKPSDHAPIWATF 267 >gi|215409940|ref|ZP_03418748.1| exodeoxyribonuclease III protein xthA (exonuclease III) [Mycobacterium tuberculosis 94_M4241A] gi|298523903|ref|ZP_07011312.1| exodeoxyribonuclease III protein XthA [Mycobacterium tuberculosis 94_M4241A] gi|298493697|gb|EFI28991.1| exodeoxyribonuclease III protein XthA [Mycobacterium tuberculosis 94_M4241A] Length = 273 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 78/267 (29%), Positives = 127/267 (47%), Gaps = 7/267 (2%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 +++ +ATWNVNSIR R+ + W+ + D++ +QETK D FP L L Y + G Sbjct: 4 ALLRLATWNVNSIRTRLDRVLDWLGRADVDVLAMQETKCPDGQFPALPLFELGYDVAHVG 63 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-----TQTLRIGNLYLPHG 116 +NGVAI S+ ++ G + AT +R+ +LY+P+G Sbjct: 64 FDQWNGVAIASRVGLDDVRVGFDGQPSWSGKPEVAATTEARALGATCGGIRVWSLYVPNG 123 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEE--PLIFAGDYNIIPQPHDCYNPIIWENDAC 174 + Y K+ W+ A L + P+ GD+NI P D ++ + Sbjct: 124 RALDDPHYTYKLDWLAALRDTAEGWLRDDPAAPIALMGDWNIAPTDDDVWSTEFFAGCTH 183 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 + R++F + + FTD +R +Y++WDY + K +G+RID I+ SP + Sbjct: 184 VSEPERKAFNAIVDAQFTDVVRPFTPGPGVYTYWDYTQLRFPKKQGMRIDFILGSPALAA 243 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261 + A+I + R PSDH PV+V L Sbjct: 244 RVMDAQIVREERKGKAPSDHAPVLVDL 270 >gi|16119275|ref|NP_395981.1| exodeoxyribonuclease III [Agrobacterium tumefaciens str. C58] gi|15161781|gb|AAK90422.1| exodeoxyribonuclease III [Agrobacterium tumefaciens str. C58] Length = 258 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 104/260 (40%), Positives = 153/260 (58%), Gaps = 5/260 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+NVN I R+ L W+ E PD++CLQE K + FP ++ Y GQK Sbjct: 1 MKLATYNVNGINGRLEVLLRWLAEAKPDVVCLQELKAPNDKFPRREIERAGYGAIWRGQK 60 Query: 64 SYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 S+NGVAIL++ +P E LPGD D +R+IEA + IG LYLP+GNP Sbjct: 61 SWNGVAILARDQEPRETRRGLPGDPDDSHSRYIEAAIDG----IVIGCLYLPNGNPAPGP 116 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K+D K+ W +R +A++ EL+ P+ GD+N++P D Y P W +DA F EVR + Sbjct: 117 KFDYKLRWFERLYSYAAELFELDVPVALVGDFNVMPTDLDVYKPERWRDDALFRPEVRAA 176 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 + +L MG+TDA+R H +Y+FW Y+ ++++++ G+RIDH +LSP L + +D Sbjct: 177 YAELIAMGWTDAVRLLHPEERIYTFWKYFRNAFARDAGLRIDHFLLSPSLRERLQTCGVD 236 Query: 243 TKPRGWTKPSDHTPVIVSLD 262 R W SDH PV + LD Sbjct: 237 KFARAWEHTSDHAPVWIELD 256 >gi|296114978|ref|ZP_06833622.1| putative exodeoxyribonuclease III [Gluconacetobacter hansenii ATCC 23769] gi|295978440|gb|EFG85174.1| putative exodeoxyribonuclease III [Gluconacetobacter hansenii ATCC 23769] Length = 260 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 99/258 (38%), Positives = 137/258 (53%), Gaps = 3/258 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ATWNVNSIR R ++ W++ PD+I LQE K + FP + + Y GQK Sbjct: 1 MKFATWNVNSIRQRHDHVLQWLEREQPDLIGLQEIKCIEDQFPADAFRKAGYESVVVGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 SYNGVAILS+ LPG + + I T+ L GNLYLP+GN Sbjct: 61 SYNGVAILSRVPFTVTHRALPGWECEPPQ---ARYVEIRTEALTFGNLYLPNGNSGGKAG 117 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 YD+K++++ + A L + GDYN+ P D + +DA R +F Sbjct: 118 YDNKLAFMAALAQHARDLLHAGTDFVLTGDYNVCPTDEDLAPGALPPDDALVRPASRAAF 177 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + L +G TDA+RA H Y+FWDY A +W ++ G+RIDH +LSP L SA D Sbjct: 178 RTLLWLGLTDALRALHPVGRFYTFWDYQAGAWQRDSGLRIDHALLSPRVAERLLSAIPDR 237 Query: 244 KPRGWTKPSDHTPVIVSL 261 + R T+PSDH P+IV+L Sbjct: 238 EERNMTQPSDHVPLIVTL 255 >gi|332141071|ref|YP_004426809.1| exodeoxyribonuclease III [Alteromonas macleodii str. 'Deep ecotype'] gi|327551093|gb|AEA97811.1| exodeoxyribonuclease III [Alteromonas macleodii str. 'Deep ecotype'] Length = 269 Score = 204 bits (518), Expect = 2e-50, Method: Composition-based stats. Identities = 86/268 (32%), Positives = 132/268 (49%), Gaps = 9/268 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V ++N+N IRAR+H L A I + PDII LQE K ++ FP E ++++ YH+ GQK Sbjct: 1 MKVISFNINGIRARLHQLQAVIDAHQPDIIGLQEIKVHNEQFPVEAVEAMGYHVYFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLD-VQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121 S+ GVA L+K +P+ + P D+ D + I T Q + I N Y P G Sbjct: 61 SHYGVAFLAKKEPLSVTMGFPTDEEDAQRRMIILKTTDDAGQPVTILNGYFPQGENEKHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175 TKY K + K + + + E+ +I GD NI + + F Sbjct: 121 TKYPAKRKFYKDLMTYLDENHTPEDNVIVMGDVNISHTDLDIGIGEENRKRWLRTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R+ L + GF D+ R + + +S++DY + ++ N+G+RID I+ + S Sbjct: 181 LPEEREWLNTLFSWGFEDSFRTLNPETNERFSWFDYRSKGFNDNRGLRIDLILATKSLHS 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 L A ID + RG KPSDH P+ Sbjct: 241 TLVDAGIDYELRGIEKPSDHAPIWAEYK 268 >gi|254805570|ref|YP_003083791.1| exodeoxyribonuclease III [Neisseria meningitidis alpha14] gi|254669112|emb|CBA07713.1| exodeoxyribonuclease III [Neisseria meningitidis alpha14] Length = 256 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 91/260 (35%), Positives = 134/260 (51%), Gaps = 4/260 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + TWNVNS+ R+ + + +N PDI+ LQE K + FP LQ + +H GQK Sbjct: 1 MKITTWNVNSLNVRLPQVQNLLADNPPDILVLQELKLDQDKFPAAALQMMGWHCVWSGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAI+S+ P ++ LP D Q R I AT +R+ N+Y +G + S K Sbjct: 61 TYNGVAIVSRNAPEDVHIGLPALPDDPQRRVIAATVGG----VRVINVYCVNGEALDSPK 116 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K W F + L+ GD+NI P DCY+P W + RQ F Sbjct: 117 FKYKEQWFAALTEFVRDEMARHGKLVLLGDFNIAPADADCYDPEKWYEKIHCSTVERQWF 176 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q L ++G TD++R H Y+++DY + + G+RIDHI++SP + L R+D Sbjct: 177 QNLLDLGLTDSLRHIHPEGAFYTWFDYRGAMFQRKLGLRIDHILVSPAMAAALKDVRVDL 236 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 + R +PSDH PV D Sbjct: 237 ETRALERPSDHAPVTAEFDW 256 >gi|268589456|ref|ZP_06123677.1| exodeoxyribonuclease III [Providencia rettgeri DSM 1131] gi|291315121|gb|EFE55574.1| exodeoxyribonuclease III [Providencia rettgeri DSM 1131] Length = 270 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 86/269 (31%), Positives = 129/269 (47%), Gaps = 8/269 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H LAA I+++ P++I LQETK D FP+E + L YH+ GQK Sbjct: 1 MKFISFNINGLRARPHQLAAIIEKHQPEVIGLQETKVHDDMFPYEEVSQLGYHVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122 ++ GVA+L+K +P+ + P DD D Q R I A + L + N Y P G Sbjct: 61 AHYGVALLTKNEPLAVRKGFPTDDDDAQRRIIMADIQTDRGPLTVVNGYFPQGESRDHPT 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + + + + E L+ GD NI P + F Sbjct: 121 KFPAKEKFYQDLQNYITSTQTAESQLLIMGDMNISPTDLDIGIGDANRKRWLKTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ KL G D RA + YS++DY + + N+G+RID ++ S + Sbjct: 181 PEEREWLAKLLGWGLVDTYRAKNPDISDCYSWFDYRSKGFDDNRGLRIDLLLASNKLAER 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 + ID + RG KPSDH PV D+ Sbjct: 241 CIATGIDYEIRGMEKPSDHAPVWSEFDLS 269 >gi|194433512|ref|ZP_03065790.1| exodeoxyribonuclease III [Shigella dysenteriae 1012] gi|194418275|gb|EDX34366.1| exodeoxyribonuclease III [Shigella dysenteriae 1012] gi|320181218|gb|EFW56137.1| Exodeoxyribonuclease III [Shigella boydii ATCC 9905] gi|332085670|gb|EGI90834.1| exodeoxyribonuclease III [Shigella dysenteriae 155-74] gi|332090564|gb|EGI95661.1| exodeoxyribonuclease III [Shigella boydii 5216-82] Length = 268 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 79/266 (29%), Positives = 124/266 (46%), Gaps = 8/266 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A ++++ PD+I LQETK D FP E + L Y++ GQK Sbjct: 1 MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 + GVA+L+K PI + PGDD + Q R I A + + N Y P G Sbjct: 61 GHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSPLGNVTVINGYFPQGESRDHPI 120 Query: 124 -YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 + K + + + L+ E P++ GD NI P + + F Sbjct: 121 KFPAKAQFYQNLQNYLEAELKRENPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ ++L + G D R + +S++DY + + N+G+RID ++ S Sbjct: 181 PEEREWMERLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAEC 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 ID + R KPSDH PV + Sbjct: 241 CVETGIDYEIRSMEKPSDHAPVWATF 266 >gi|170768737|ref|ZP_02903190.1| exodeoxyribonuclease III [Escherichia albertii TW07627] gi|170122285|gb|EDS91216.1| exodeoxyribonuclease III [Escherichia albertii TW07627] Length = 268 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 80/266 (30%), Positives = 123/266 (46%), Gaps = 8/266 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A ++++ PD+I LQETK D FP E + L Y++ GQK Sbjct: 1 MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122 + GVA+L+K PI + PGD D Q R I A + + N Y P G Sbjct: 61 GHYGVALLTKETPITVRRGFPGDGEDAQRRIIMAEIPSPLGNVTVINGYFPQGESRDHPT 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + + L+ E P++ GD NI P + + F Sbjct: 121 KFPAKAQFYLNLQNYLETELKRENPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ ++L + G D R + +S++DY + + N+G+RID ++ S Sbjct: 181 PEEREWMERLLSWGLVDTFRHANPETADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAEC 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 ID + R KPSDH PV + Sbjct: 241 CVETGIDYEIRSMEKPSDHAPVWATF 266 >gi|331683257|ref|ZP_08383858.1| exodeoxyribonuclease III [Escherichia coli H299] gi|331079472|gb|EGI50669.1| exodeoxyribonuclease III [Escherichia coli H299] Length = 268 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 78/266 (29%), Positives = 124/266 (46%), Gaps = 8/266 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A ++++ PD+I LQETK D FP E + L Y++ GQK Sbjct: 1 MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 + GVA+++K PI + PGDD + Q R I A + + N Y P G Sbjct: 61 GHYGVALMTKETPIAVRRGFPGDDEEAQRRIIMAEIPSPLGNVTVINGYFPQGESRDHPI 120 Query: 124 -YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 + K + + + L+ E P++ GD NI P + + F Sbjct: 121 KFPAKAQFYQNLQNYLETELKRENPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ ++L + G D R + +S++DY + + N+G+RID ++ S Sbjct: 181 PEEREWMERLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAEC 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 ID + R KPSDH PV + Sbjct: 241 CVETGIDYEIRSMEKPSDHAPVWATF 266 >gi|269102062|ref|ZP_06154759.1| exodeoxyribonuclease III [Photobacterium damselae subsp. damselae CIP 102761] gi|268161960|gb|EEZ40456.1| exodeoxyribonuclease III [Photobacterium damselae subsp. damselae CIP 102761] Length = 268 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 85/268 (31%), Positives = 134/268 (50%), Gaps = 9/268 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V ++N+N +RAR+H L A I+++ PD+I LQE K D+ FP ++++ Y + GQK Sbjct: 1 MKVISFNINGLRARLHQLQALIEKHQPDVIGLQEIKVHDEAFPLADVEAMGYKVYHHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLD-VQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121 ++ GVA+L K +PIE+ P DD D + + N + + I N Y P G+ I Sbjct: 61 AHYGVALLCKQEPIEVKKGFPTDDDDAQRRMIMATFEQENGKKITIMNGYFPQGDNINHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175 TK+ K + + + + +E LI GD NI P + + F Sbjct: 121 TKFPAKEKFYADLMTYLNTYHNNDEELIVMGDINISPIDLDIGIGDNNAKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 RQ + L + GF D R H T YS++DY + + N+G+RID I+ +P Sbjct: 181 QPIERQWLKTLLDWGFIDTFRQLHPTVDDQYSWFDYRSKGFDDNRGLRIDVILATPSLAE 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + ID + RG KPSDH P+ + + Sbjct: 241 RCIESGIDYELRGIEKPSDHAPIWSTFN 268 >gi|241758932|ref|ZP_04757044.1| exodeoxyribonuclease III [Neisseria flavescens SK114] gi|241320753|gb|EER56986.1| exodeoxyribonuclease III [Neisseria flavescens SK114] Length = 256 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 91/259 (35%), Positives = 137/259 (52%), Gaps = 4/259 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ R+ + W+ ++ DI+ LQE K + FP LQ + +H GQK Sbjct: 1 MKIATWNVNSLNVRLPQVQNWLADHQADILALQELKLDQDKFPAAALQMMGWHCVWSGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAI+S+++P ++ LP D Q R I AT +R+ N+Y +G + S K Sbjct: 61 TYNGVAIISRHEPQDVHCGLPALPDDPQRRVIAATING----VRVINVYCINGEALDSPK 116 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K W F + L+ GD+NI P DCY+P W + RQ F Sbjct: 117 FQYKEQWFAALTEFVRNEMAAHPKLVLLGDFNIAPADADCYDPEKWHEKIHCSSIERQWF 176 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + L ++G TD +R H Y+++DY + + G+RIDHI+ SPE + L + +D Sbjct: 177 KNLLDLGLTDGLRKIHPEGAFYTWFDYRGAMFQRKLGLRIDHILTSPELAATLTNVTVDL 236 Query: 244 KPRGWTKPSDHTPVIVSLD 262 + R +PSDH PVI D Sbjct: 237 ETRAQERPSDHAPVIAEFD 255 >gi|15676313|ref|NP_273448.1| exodeoxyribonuclease III [Neisseria meningitidis MC58] gi|134104765|pdb|2JC4|A Chain A, 3'-5' Exonuclease (Nexo) From Neisseria Meningitidis gi|7225621|gb|AAF40839.1| exodeoxyribonuclease III [Neisseria meningitidis MC58] gi|316984902|gb|EFV63858.1| exodeoxyribonuclease III [Neisseria meningitidis H44/76] gi|325134978|gb|EGC57610.1| exodeoxyribonuclease III [Neisseria meningitidis M13399] gi|325140915|gb|EGC63422.1| exodeoxyribonuclease III [Neisseria meningitidis CU385] gi|325199589|gb|ADY95044.1| exodeoxyribonuclease III [Neisseria meningitidis H44/76] Length = 256 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 91/260 (35%), Positives = 135/260 (51%), Gaps = 4/260 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + TWNVNS+ R+ + + +N PDI+ LQE K + FP LQ + +H GQK Sbjct: 1 MKITTWNVNSLNVRLPQVQNLLADNPPDILVLQELKLDQDKFPAAALQMMGWHCVWSGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAI+S+ P ++ LP D Q R I AT + +R+ N+Y +G + S K Sbjct: 61 TYNGVAIVSRSVPQDVHFGLPALPDDPQRRVIAATVSG----VRVINVYCVNGEALDSPK 116 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K W F + L+ GD+NI P DCY+P W + RQ F Sbjct: 117 FKYKEQWFAALTEFVRDEMTRHGKLVLLGDFNIAPADADCYDPEKWHEKIHCSSVERQWF 176 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q L ++G TD++R H Y+++DY + + G+RIDHI++SP + L R+D Sbjct: 177 QNLLDLGLTDSLRQVHPEGAFYTWFDYRGAMFQRKLGLRIDHILVSPAMAAALKDVRVDL 236 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 + R +PSDH PV D Sbjct: 237 ETRALERPSDHAPVTAEFDW 256 >gi|123442505|ref|YP_001006482.1| exonuclease III [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122089466|emb|CAL12314.1| exodeoxyribonuclease III [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 268 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 84/268 (31%), Positives = 128/268 (47%), Gaps = 8/268 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H LAA I+++ PD+I LQETK D FP E + YH+ GQK Sbjct: 1 MKFVSFNINGLRARPHQLAAIIEQHQPDVIGLQETKVHDDMFPLEEVSQHGYHVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 + GVA+L+K +P+ I P D+ D Q R I A L + N Y P G Sbjct: 61 GHYGVALLTKNEPLAIRRGFPTDEEDAQRRIIMADIATPQGPLTVINGYFPQGESRDHPI 120 Query: 124 -YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 + K + ++ Q+L + ++ GD NI P D + F Sbjct: 121 KFPAKERFYADLQQYLEQQLSADAQVLIMGDLNISPTDLDIGIGEDSRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R ++LQN G D RA + + +S++DY + + +N+G+RID ++ S + Sbjct: 181 PEERAWLERLQNWGLVDTFRAANPDCNDQFSWFDYRSRGFDENRGLRIDLLLASRPLAAR 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + ID R KPSDH PV + Sbjct: 241 CIATGIDYDIRSMEKPSDHAPVWSEFAL 268 >gi|330941805|gb|EGH44552.1| exonuclease III [Pseudomonas syringae pv. pisi str. 1704B] Length = 270 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 90/269 (33%), Positives = 135/269 (50%), Gaps = 11/269 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +RAR H LAA I ++ PD+I LQETK D+ FP +++L YH+ GQK Sbjct: 1 MKIVSFNINGLRARPHQLAALIDKHQPDVIGLQETKVSDEQFPQAEVEALGYHVHFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122 + GVA+LS+ P+ + GDD D Q RFI T+ N Q + I N Y P G Sbjct: 61 GHYGVALLSRNAPLALHKGFEGDDEDSQKRFIWGTYADSNGQPVTIMNGYFPQGESRDHP 120 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175 K+ K + + + ++PLI GD NI PQ D + F Sbjct: 121 TKFPAKRRFYENLQTLLEGQFRNDQPLIVMGDVNISPQDCDIGIGADNAKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232 E R+ ++L+N G D+ R + +S++DY + + +G+RID IM S Sbjct: 181 LPEEREWMERLKNWGLVDSFRHLYPEVVDRFSWFDYRSRGFEDEPKRGLRIDLIMTSSGL 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + A +D RG KPSDH P+ + L Sbjct: 241 QPRIKEAGVDYDLRGMEKPSDHAPIWLEL 269 >gi|205352972|ref|YP_002226773.1| exonuclease III [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207857189|ref|YP_002243840.1| exonuclease III [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|205272753|emb|CAR37670.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|206708992|emb|CAR33322.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|326628046|gb|EGE34389.1| exonuclease III [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 268 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 77/268 (28%), Positives = 122/268 (45%), Gaps = 8/268 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A ++++ PD+I LQETK D+ FP E + L Y++ GQK Sbjct: 1 MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDEMFPLEEVAKLGYNVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122 + GVA+L+K PI + P D + Q R I A + + N Y P G Sbjct: 61 GHYGVALLTKATPISVRRGFPDDGEEAQRRIIMAEIPSPLGNITVINGYFPQGENRDHPL 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + + + L+ + P++ GD NI P + + F Sbjct: 121 KFPAKAQFYQNLQNYLETELKCDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +L G D R + +S++DY + + N+G+RID ++ S Sbjct: 181 PEEREWMSRLLKWGLVDTFRQANPQTMDKFSWFDYRSKGFVDNRGLRIDLLLASAPLAER 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 ID R KPSDH PV + + Sbjct: 241 CAETGIDYDIRSMEKPSDHAPVWATFRV 268 >gi|116050489|ref|YP_790692.1| exonuclease III [Pseudomonas aeruginosa UCBPP-PA14] gi|296389031|ref|ZP_06878506.1| exonuclease III [Pseudomonas aeruginosa PAb1] gi|313107448|ref|ZP_07793636.1| exodeoxyribonuclease III [Pseudomonas aeruginosa 39016] gi|115585710|gb|ABJ11725.1| exodeoxyribonuclease III [Pseudomonas aeruginosa UCBPP-PA14] gi|310880138|gb|EFQ38732.1| exodeoxyribonuclease III [Pseudomonas aeruginosa 39016] Length = 270 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 87/269 (32%), Positives = 130/269 (48%), Gaps = 11/269 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +RAR H LAA I+ + PD+I LQETK D FP +++L YH+ GQK Sbjct: 1 MKIVSFNINGLRARPHQLAALIERHQPDVIGLQETKVADDQFPQAEIEALGYHVHYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122 + GVA+LS+ P+E+ P D + Q RFI TF + + N Y P G Sbjct: 61 GHYGVALLSRQAPLELHRGFPSDGEESQRRFIWGTFSDAQGNPITVMNGYFPQGENREHP 120 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175 K+ K + + E+ L+ GD NI P+ D + F Sbjct: 121 TKFPAKQRFYADLQSLLENSFKPEQALVVMGDINISPEDCDIGIGEENRKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232 E R+ L+N G D+ RA + + +S++DY + + +G+RID I+ S Sbjct: 181 LPEEREWLATLKNWGLVDSFRALNPEVNDRFSWFDYRSRGFEDTPKRGLRIDVILASRVL 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 S A ID RG KPSDH P+ + L Sbjct: 241 QSRFKDAGIDYDLRGMEKPSDHAPIWLEL 269 >gi|224584182|ref|YP_002637980.1| exonuclease III [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224468709|gb|ACN46539.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 268 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 77/268 (28%), Positives = 121/268 (45%), Gaps = 8/268 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A ++++ PD+I LQETK D+ FP E + L Y++ GQK Sbjct: 1 MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDEMFPLEEVAKLGYNVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122 + GVA+L+K PI + P D + Q R I A + + N Y P G Sbjct: 61 GHYGVALLTKATPISVRRGFPDDGEEAQRRIIMAEIPSPLGNITVINGYFPQGESRDHPL 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + + + L+ P++ GD NI P + + F Sbjct: 121 KFPAKAQFYQNLQNYLETELKCNNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +L G D R + +S++DY + + N+G+RID ++ S Sbjct: 181 PEEREWMSRLLKWGLVDTFRQANPQTMDKFSWFDYRSKGFVDNRGLRIDLLLASAPLAER 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 ID R KPSDH PV + + Sbjct: 241 CAETGIDYDIRSMEKPSDHAPVWATFRV 268 >gi|269138847|ref|YP_003295548.1| exonuclease III [Edwardsiella tarda EIB202] gi|267984508|gb|ACY84337.1| exonuclease III [Edwardsiella tarda EIB202] gi|304558837|gb|ADM41501.1| Exodeoxyribonuclease III [Edwardsiella tarda FL6-60] Length = 269 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 81/269 (30%), Positives = 124/269 (46%), Gaps = 8/269 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H LAA +++++PD+I LQETK D FP + L L YH+ GQK Sbjct: 1 MKFISFNINGLRARPHQLAAIVEKHSPDVIGLQETKVHDDMFPLQDLAQLGYHLHYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 + GVA+L++ P+ + PGDD + Q R I A TL + N Y P G Sbjct: 61 GHYGVALLTRMAPLAVRKGFPGDDAEAQRRIIMADIPTELGTLTVINGYFPQGESRDHPI 120 Query: 124 -YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC------YNPIIWENDACFT 176 + K + R+ L + P++ GD NI P+ D + F Sbjct: 121 KFPAKSKFYADLQRYLQDALSPQNPVLIMGDMNITPRDIDIGIGEDSRRRWLRSGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHL-YSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +L G D R + +S++DY + + N+G+RID ++ S Sbjct: 181 PEEREWLDRLLAWGLVDTYRQANPQGDERFSWFDYRSKGFDDNRGLRIDLLLASQPLAQR 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 ID R KPSDH P+ + Sbjct: 241 CTDTGIDYAIRAMEKPSDHAPIWAEFALS 269 >gi|16760593|ref|NP_456210.1| exonuclease III [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|16764653|ref|NP_460268.1| exonuclease III [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|29141647|ref|NP_804989.1| exonuclease III [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56413712|ref|YP_150787.1| exonuclease III [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161614297|ref|YP_001588262.1| exonuclease III [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167552346|ref|ZP_02346099.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167991882|ref|ZP_02572981.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168233217|ref|ZP_02658275.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168238968|ref|ZP_02664026.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168244409|ref|ZP_02669341.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168263883|ref|ZP_02685856.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|194446222|ref|YP_002040559.1| exonuclease III [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194449710|ref|YP_002045308.1| exonuclease III [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194471225|ref|ZP_03077209.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194733972|ref|YP_002114319.1| exonuclease III [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197250009|ref|YP_002146737.1| exonuclease III [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197264133|ref|ZP_03164207.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197362635|ref|YP_002142272.1| exonuclease III [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198244728|ref|YP_002215824.1| exonuclease III [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200389740|ref|ZP_03216351.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204927863|ref|ZP_03219064.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|213023056|ref|ZP_03337503.1| exonuclease III [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] gi|213162974|ref|ZP_03348684.1| exonuclease III [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213427783|ref|ZP_03360533.1| exonuclease III [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] gi|213581312|ref|ZP_03363138.1| exonuclease III [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213612544|ref|ZP_03370370.1| exonuclease III [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213648612|ref|ZP_03378665.1| exonuclease III [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213850398|ref|ZP_03381296.1| exonuclease III [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|60392242|sp|P0A1A9|EX3_SALTY RecName: Full=Exodeoxyribonuclease III; Short=EXO III; Short=Exonuclease III; AltName: Full=AP endonuclease VI gi|60392243|sp|P0A1B0|EX3_SALTI RecName: Full=Exodeoxyribonuclease III; Short=EXO III; Short=Exonuclease III; AltName: Full=AP endonuclease VI gi|25289127|pir||AC0710 exodeoxyribonuclease III (EC 3.1.11.2) [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|4324669|gb|AAD16979.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Typhimurium] gi|16419819|gb|AAL20227.1| exonuclease III [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|16502889|emb|CAD02052.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Typhi] gi|29137275|gb|AAO68838.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|56127969|gb|AAV77475.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161363661|gb|ABX67429.1| hypothetical protein SPAB_02042 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194404885|gb|ACF65107.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194408014|gb|ACF68233.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194457589|gb|EDX46428.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194709474|gb|ACF88695.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197094112|emb|CAR59612.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197213712|gb|ACH51109.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197242388|gb|EDY25008.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197288283|gb|EDY27668.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197939244|gb|ACH76577.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199602185|gb|EDZ00731.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204323205|gb|EDZ08401.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205323022|gb|EDZ10861.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205329685|gb|EDZ16449.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205332615|gb|EDZ19379.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205336751|gb|EDZ23515.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205347536|gb|EDZ34167.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|261246511|emb|CBG24321.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267993174|gb|ACY88059.1| exonuclease III [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157839|emb|CBW17333.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312912288|dbj|BAJ36262.1| exonuclease III [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321223927|gb|EFX48990.1| Exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322616690|gb|EFY13599.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322619793|gb|EFY16667.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622362|gb|EFY19207.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322627886|gb|EFY24676.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322633016|gb|EFY29759.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322636738|gb|EFY33441.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641236|gb|EFY37877.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322645225|gb|EFY41754.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650167|gb|EFY46581.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322655740|gb|EFY52042.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322660066|gb|EFY56305.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322665367|gb|EFY61555.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322669646|gb|EFY65793.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322673551|gb|EFY69653.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322677477|gb|EFY73541.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322679858|gb|EFY75897.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322687330|gb|EFY83302.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323129573|gb|ADX17003.1| exonuclease III [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323192448|gb|EFZ77678.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198697|gb|EFZ83798.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204125|gb|EFZ89139.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208743|gb|EFZ93681.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323210257|gb|EFZ95156.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217719|gb|EGA02434.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323220274|gb|EGA04729.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323227561|gb|EGA11719.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229522|gb|EGA13645.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323232745|gb|EGA16841.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240216|gb|EGA24260.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323242796|gb|EGA26817.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323249113|gb|EGA33032.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323254387|gb|EGA38204.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323257176|gb|EGA40879.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323263503|gb|EGA47031.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323267084|gb|EGA50569.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323271592|gb|EGA55013.1| exonuclease III [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326623571|gb|EGE29916.1| exonuclease III [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 268 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 77/268 (28%), Positives = 122/268 (45%), Gaps = 8/268 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A ++++ PD+I LQETK D+ FP E + L Y++ GQK Sbjct: 1 MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDEMFPLEEVAKLGYNVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122 + GVA+L+K PI + P D + Q R I A + + N Y P G Sbjct: 61 GHYGVALLTKATPISVRRGFPDDGEEAQRRIIMAEIPSPLGNITVINGYFPQGESRDHPL 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + + + L+ + P++ GD NI P + + F Sbjct: 121 KFPAKAQFYQNLQNYLETELKCDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +L G D R + +S++DY + + N+G+RID ++ S Sbjct: 181 PEEREWMSRLLKWGLVDTFRQANPQTMDKFSWFDYRSKGFVDNRGLRIDLLLASAPLAER 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 ID R KPSDH PV + + Sbjct: 241 CAETGIDYDIRSMEKPSDHAPVWATFRV 268 >gi|325205470|gb|ADZ00923.1| exodeoxyribonuclease III [Neisseria meningitidis M04-240196] Length = 256 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 91/260 (35%), Positives = 134/260 (51%), Gaps = 4/260 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + TWNVNS+ R+ + + +N PDI+ LQE K + FP LQ + +H GQK Sbjct: 1 MKITTWNVNSLNVRLPQVQNLLADNPPDILVLQELKLDQDKFPAAALQMMGWHCVWSGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAI+S+ P ++ LP D Q R I AT +R+ N+Y +G I S K Sbjct: 61 TYNGVAIVSRSVPEDVHFGLPSLPDDPQRRVIAATVGG----VRVINVYCVNGEAIDSPK 116 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K W F + L+ GD+NI P DCY+P W + RQ F Sbjct: 117 FKYKEQWFAALTEFVRDEMARHGKLVLLGDFNIAPADADCYDPEKWHEKIHCSSVERQWF 176 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + L ++G TD++R H Y+++DY + + G+RIDHI++SP + L R+D Sbjct: 177 KNLLDLGLTDSLRQVHPEGAFYTWFDYRGAMFQRKLGLRIDHILVSPAMAAALKDVRVDL 236 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 + R +PSDH PV D Sbjct: 237 ETRALERPSDHAPVTAEFDW 256 >gi|194292799|ref|YP_002008706.1| exodeoxyribonuclease iii, ap endonuclease, family 1 [Cupriavidus taiwanensis LMG 19424] gi|193226703|emb|CAQ72654.1| Exodeoxyribonuclease III, AP endonuclease, family 1 [Cupriavidus taiwanensis LMG 19424] Length = 270 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 109/261 (41%), Positives = 153/261 (58%), Gaps = 5/261 (1%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 S + +AT+N+N IR+R+ L W+ PDI+CLQE KT D++FP ++ Y G Sbjct: 4 STLKIATFNINGIRSRVGALCHWLAREAPDIVCLQELKTADESFPAREIRDAGYGAIWHG 63 Query: 62 QKSYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 QKS+NGVAIL++ +P+E+ LPGD D +R++EA + L I LYLP+GNP Sbjct: 64 QKSWNGVAILARGEEPVEVRRGLPGDPDDSHSRYLEAAVSG----LLIACLYLPNGNPQP 119 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 K+D K++W +R + A + P++ AGDYN++P D YNP W DA E R Sbjct: 120 GPKFDYKLAWFERLIAHAQELFGSGHPVVLAGDYNVVPTDQDIYNPRSWRKDALLQPESR 179 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 ++ +L G+TDA+R H +Y+FWDY+ W N G+RIDHI+LS E L A Sbjct: 180 DAYARLLAQGWTDALRQRHPDAPVYTFWDYFRQHWQTNSGLRIDHILLSAELAPRLRDAG 239 Query: 241 IDTKPRGWTKPSDHTPVIVSL 261 +D RG PSDH P V L Sbjct: 240 VDRWVRGEDHPSDHAPAWVVL 260 >gi|330503248|ref|YP_004380117.1| exonuclease III [Pseudomonas mendocina NK-01] gi|328917534|gb|AEB58365.1| exonuclease III [Pseudomonas mendocina NK-01] Length = 270 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 83/270 (30%), Positives = 135/270 (50%), Gaps = 11/270 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +RAR H L A I+++ PD+I LQETK D+ FP ++ L YH+ GQK Sbjct: 1 MKIVSFNINGLRARPHQLQALIEKHQPDVIGLQETKVADEQFPEAEIRQLGYHVHYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122 + GVA+LS+ +P+ + PGD D Q RFI TF + + + N Y P G Sbjct: 61 GHYGVALLSRQEPLSLHKGFPGDGEDSQRRFIYGTFADASGNPITVMNGYFPQGESRDHP 120 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175 K+ K + + +R + ++ L+ GD NI P+ + F Sbjct: 121 VKFPAKQRFYADLQQLLVERFDPQQALVVMGDINISPEDCDIGIGEPNRLRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232 E R+ L++ G D+ R + + +S++DY + + +G+RID I+ S + Sbjct: 181 LPEEREWLATLKSWGLVDSFRHLNPEVNDRFSWFDYRSRGFEDEPKRGLRIDVILASQQL 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + A ID RG KPSDH P+ + L+ Sbjct: 241 QARFKDAGIDYDLRGMDKPSDHAPIWLELN 270 >gi|114570470|ref|YP_757150.1| exodeoxyribonuclease III [Maricaulis maris MCS10] gi|114340932|gb|ABI66212.1| Exodeoxyribonuclease III [Maricaulis maris MCS10] Length = 262 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 123/261 (47%), Positives = 167/261 (63%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 +TVA+WNVNS++AR+ N+ W+ E PD+ CLQE KT D+ FP ++ L Y+IET GQ Sbjct: 2 TLTVASWNVNSVKARLPNVLDWLSEAKPDVACLQEIKTVDEGFPRMEIEDLGYNIETHGQ 61 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 KSYNGVAILSK+ E+ LPGD+ D QAR+IEA +R+ ++YLP+GNP Sbjct: 62 KSYNGVAILSKHPIEELRCGLPGDESDEQARYIEAVIAAEGGPVRVASIYLPNGNPAPGP 121 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 KYD K++W++R R A L EEPLI AGDYN IP+ DC++ WE+DA + R + Sbjct: 122 KYDYKLAWMERLRRHAQNLLTFEEPLILAGDYNCIPRDSDCWDIAEWESDALALPQTRAA 181 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F+ L+ +G T+A H Y+F+DY A W+K GIRIDH++ SP+A L I Sbjct: 182 FRALKWLGLTEAFEQLDGRGHQYTFYDYQAGRWNKGHGIRIDHLLCSPQAADHLEGIEIH 241 Query: 243 TKPRGWTKPSDHTPVIVSLDI 263 TK RG K SDH P++ S + Sbjct: 242 TKTRGKEKASDHIPIVGSFSL 262 >gi|34496332|ref|NP_900547.1| exodeoxyribonuclease III [Chromobacterium violaceum ATCC 12472] gi|34102184|gb|AAQ58551.1| exodeoxyribonuclease III [Chromobacterium violaceum ATCC 12472] Length = 257 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 83/260 (31%), Positives = 135/260 (51%), Gaps = 7/260 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ATWNVNS++ R+ + W+ E +++CLQE K + FP +++ Y GQK Sbjct: 1 MRFATWNVNSLKVRLPQVLQWLAETGVEVLCLQELKMDQGAFPLAEIEAAGYRAVWFGQK 60 Query: 64 SYNGVAI--LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +YNGVAI + + ++V +PG + + +R+ Y +G + S Sbjct: 61 TYNGVAILARTPLEMTDVVAGIPGYGDEQRRVIAATVNG-----VRVICGYFVNGEAVDS 115 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 KY K+ W+ + + + L L+ GDYNI P+ D Y+P W + R Sbjct: 116 PKYPYKLEWLSKLEGYVAAELARHPQLLLLGDYNIAPEDRDVYDPEGWREQVLCSTPERD 175 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +F++L +G +D+ R + YS+WDY + +NKG+RIDHI++S + I Sbjct: 176 AFRRLIALGLSDSFRLFNQEEKQYSWWDYRQMMFRRNKGVRIDHILVSDALKPRAQACEI 235 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 D PR W +PSDHTPV+++L Sbjct: 236 DKAPRKWERPSDHTPVVLTL 255 >gi|85711701|ref|ZP_01042758.1| Exonuclease III [Idiomarina baltica OS145] gi|85694561|gb|EAQ32502.1| Exonuclease III [Idiomarina baltica OS145] Length = 269 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 81/269 (30%), Positives = 128/269 (47%), Gaps = 9/269 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N IRAR+H L A I ++ PD+I LQETK D FP + ++ + YH+ GQK Sbjct: 1 MKFISFNINGIRARLHQLQAMIDKHQPDVIGLQETKVHDDQFPQQAVEDMGYHVNFFGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI-NTQTLRIGNLYLPHGNPITST 122 + GVA+LSK + P + D Q R I + + + T+R+ N Y P G Sbjct: 61 GHYGVALLSKKPLTNVQKGFPNEPEDAQRRMIMGDYPLDDGATVRVLNGYFPQGESRDHP 120 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175 K+ K + + + + + L E+P+I GD NI Q D + F Sbjct: 121 TKFPMKAQFYRDLINYLNDDLSPEQPVIVMGDMNISHQDRDIGIGETNAKRWLRTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHH-LYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R ++ + G D R + +S++DY + + N+G+RID I+ + Sbjct: 181 LPEERDWLNEVLDWGLIDTYRTLNPEQDNEFSWFDYRSRGFDDNRGLRIDLILATQTLAD 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + ID + RG KPSDH P+ I Sbjct: 241 RCEESGIDYELRGIEKPSDHAPIWSQFSI 269 >gi|110641869|ref|YP_669599.1| exonuclease III [Escherichia coli 536] gi|300987545|ref|ZP_07178252.1| exodeoxyribonuclease III [Escherichia coli MS 200-1] gi|110343461|gb|ABG69698.1| exodeoxyribonuclease III [Escherichia coli 536] gi|300306115|gb|EFJ60635.1| exodeoxyribonuclease III [Escherichia coli MS 200-1] gi|324011528|gb|EGB80747.1| exodeoxyribonuclease III [Escherichia coli MS 60-1] Length = 272 Score = 203 bits (517), Expect = 2e-50, Method: Composition-based stats. Identities = 79/268 (29%), Positives = 125/268 (46%), Gaps = 8/268 (2%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + ++N+N +RAR H L A ++++ PD+I LQETK D FP E + L Y++ G Sbjct: 3 ATMKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDVMFPLEEVAKLGYNVFYHG 62 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 QK + GVA+L+K PI + PGDD + Q R I A + + N Y P G Sbjct: 63 QKGHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSPLGNVTVINGYFPQGESRDH 122 Query: 122 TK-YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDAC 174 + K + + + L+ E P++ GD NI P + + Sbjct: 123 PIKFPAKAQFYQNLQNYLETELKRENPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCS 182 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 F E R+ ++L + G D R + +S++DY + + N+G+RID ++ S Sbjct: 183 FLPEEREWMERLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLA 242 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSL 261 ID + R KPSDH PV + Sbjct: 243 ECCVETGIDYEIRSMEKPSDHAPVWATF 270 >gi|262043063|ref|ZP_06016204.1| exodeoxyribonuclease III [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259039595|gb|EEW40725.1| exodeoxyribonuclease III [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 268 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 82/266 (30%), Positives = 126/266 (47%), Gaps = 8/266 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H LAA ++++ PD+I LQETK D FP E + L Y++ GQK Sbjct: 1 MKFVSFNINGLRARPHQLAAIVEKHQPDVIGLQETKVHDDMFPLEEVARLGYNVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122 + GVA+L+K PI + P D + Q R I A + + N Y P G T Sbjct: 61 GHYGVALLTKETPITVRRGFPDDGEEAQRRIIMAEIPSPFGNVTVINGYFPQGESRDHET 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K ++ + + L E P++ GD NI P + + F Sbjct: 121 KFPAKAAFYQNLQNYLETELNKENPVLIMGDMNISPTDLDIGIGEENRKRWLLTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHH-LYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +L G D R + +H +S++DY + + N+G+RID ++ S Sbjct: 181 PEEREWMDRLLGWGLVDTWRQANPDNHEHFSWFDYRSKGFDDNRGLRIDLLLASQPLAQR 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 ID + RG KPSDH PV + Sbjct: 241 CVETGIDYEIRGMEKPSDHAPVWATF 266 >gi|166363474|ref|YP_001655747.1| exodeoxyribonuclease III [Microcystis aeruginosa NIES-843] gi|166085847|dbj|BAG00555.1| exodeoxyribonuclease III [Microcystis aeruginosa NIES-843] Length = 266 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 94/262 (35%), Positives = 149/262 (56%), Gaps = 4/262 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSIR+R + W++ N +++CLQETK D++FP E +SL YH+ GQK Sbjct: 1 MKIATWNVNSIRSRQEQVINWLQLNPVEVLCLQETKVIDRDFPREAFESLGYHLYISGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHL---PGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 SYNGVAI S+ +I G++L + + T +RI NLY+P+G+ + Sbjct: 61 SYNGVAIFSRKPLDDITVGFSPIIGENLTGELDEQKRVITGVIGDIRIINLYVPNGSSLD 120 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPL-IFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 S KY K+ W++ ++ + + + GD+NI + D Y+P EN + + Sbjct: 121 SDKYIYKLKWLETLRKYLDKIINSQPEELCICGDFNIALEDKDIYDPKGKENHIMSSAKE 180 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R++ +K+ +G DA R YS+WDY + +++N+G RIDH+ L+P+ + Sbjct: 181 REALEKVLEIGLQDAFRKFTSAAGHYSWWDYRSGGFARNRGWRIDHLYLTPQLYEKAVNC 240 Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261 ID +PR KPSDHTPVI+ + Sbjct: 241 LIDREPRKQEKPSDHTPVILEI 262 >gi|67924378|ref|ZP_00517808.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Crocosphaera watsonii WH 8501] gi|67853771|gb|EAM49100.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Crocosphaera watsonii WH 8501] Length = 262 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 90/262 (34%), Positives = 140/262 (53%), Gaps = 4/262 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSIR R ++ W+ N+ D++CLQETK DK+FP + + L YH GQK Sbjct: 1 MKIATWNVNSIRTRQPHVIDWLTNNSIDVLCLQETKVIDKDFPRQPFEELGYHTYIYGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT---QTLRIGNLYLPHGNPIT 120 +YNGVAI S+ +I+T + +A+ + I + +RI N+Y+P+G + Sbjct: 61 AYNGVAIFSRQPMTDIITGFTDIVGEEKAQSFDEQKRIISGVIDDIRIINVYVPNGASLG 120 Query: 121 STKYDDKISWIKRFLRFASQ-RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 S KY+ K+ W + + L+ + GD+NI D YN E + Sbjct: 121 SEKYEYKLQWFQVLKAYLDDLILKEAREVCICGDFNIALDDKDIYNSKGKEKHIMSSPVE 180 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R++ Q + +G DA R +S+WDY + + +N+G RIDH+ L+ + + Sbjct: 181 RETLQNILTIGLKDAFRKFTTEGGHFSWWDYRSGGFQRNRGWRIDHLYLTHKLYEKAINC 240 Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261 ID +PR KPSDHTPVI+ + Sbjct: 241 TIDIEPRKQEKPSDHTPVILEI 262 >gi|258621396|ref|ZP_05716430.1| exodeoxyribonuclease III [Vibrio mimicus VM573] gi|262171177|ref|ZP_06038855.1| exodeoxyribonuclease III [Vibrio mimicus MB-451] gi|258586784|gb|EEW11499.1| exodeoxyribonuclease III [Vibrio mimicus VM573] gi|261892253|gb|EEY38239.1| exodeoxyribonuclease III [Vibrio mimicus MB-451] Length = 268 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 79/268 (29%), Positives = 128/268 (47%), Gaps = 9/268 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V ++N+N +RAR+H L A I ++ PD+I LQE K D+ FP + ++++ Y + GQK Sbjct: 1 MKVISFNINGLRARLHQLQALIDKHQPDVIGLQEIKVHDEAFPRQEVEAMGYQVYFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGD-DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121 ++ GVAIL K P+E++ P D + + + + I N Y P G+ + Sbjct: 61 AHYGVAILCKQTPVEVIKGFPTDSEEHQKRMIMATFADEDGNKTTILNGYFPQGDNVEHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175 TK+ K + + + + + E L+ GD NI P + F Sbjct: 121 TKFPYKRQFYRDLMTYLREHRSNTERLVVMGDINISPLDLDIGIGEANRKRWLQTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R+ Q L + G D R H +S++DY + + N+G+RID I+ +P Sbjct: 181 QPEEREWLQTLMDWGLVDTFRQLHPEVSDQFSWFDYRSRGFDDNRGLRIDVILATPTLAE 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 A ID + RG KPSDH P+ + Sbjct: 241 TCQEAGIDYELRGIDKPSDHAPIWATFK 268 >gi|218709053|ref|YP_002416674.1| exonuclease III [Vibrio splendidus LGP32] gi|218322072|emb|CAV18146.1| Exodeoxyribonuclease III [Vibrio splendidus LGP32] Length = 268 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 78/268 (29%), Positives = 132/268 (49%), Gaps = 9/268 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V ++N+N +RAR+H L A I ++ PD+I LQE K D+ FP ++++ Y + GQK Sbjct: 1 MKVISFNINGLRARLHQLQAIIDKHQPDVIGLQEIKVHDEAFPLADVEAMGYKVYFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121 ++ GVA+L K +PI + P ++ + + + + + + N Y P G+ I Sbjct: 61 AHYGVAMLCKQEPISVQKGFPTDNEDHQKRMIMATFEDEHGEKVTVLNGYFPQGDNIKHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175 TKY K + K + + + +E +I GD NI P + F Sbjct: 121 TKYPYKRQFYKDLMTYLNDYHNKDEQVIVMGDINISPTDIDIGIGEPNAKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R+ + L + GF D+ R H + YS++DY + + N+G+RID ++ + + Sbjct: 181 QPEEREWLKTLMDWGFVDSFRLLHPEVNDQYSWFDYRSKGFVDNRGLRIDVVLATQKLAD 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 A ID + RG KPSDH P+ + Sbjct: 241 KCTEAGIDYELRGIEKPSDHAPIWSTFK 268 >gi|168463303|ref|ZP_02697234.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168821944|ref|ZP_02833944.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|195634571|gb|EDX52923.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|205341658|gb|EDZ28422.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] Length = 268 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 77/268 (28%), Positives = 122/268 (45%), Gaps = 8/268 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A ++++ PD+I LQETK D+ FP E + L Y++ GQK Sbjct: 1 MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDEMFPLEEVAKLGYNVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122 + GVA+L+K PI + P D + Q R I A + + N Y P G Sbjct: 61 GHYGVALLTKATPISVRRGFPDDGEEAQRRIIMAEIPSPLGNITVINGYFPQGESRDHPL 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + + + L+ + P++ GD NI P + + F Sbjct: 121 KFPAKAQFYQNLQNYLETELKCDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +L G D R + +S++DY + + N+G+RID ++ S Sbjct: 181 PEEREWMSRLLKWGLVDTFREANPQTMDKFSWFDYRSKGFVDNRGLRIDLLLASAPLAER 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 ID R KPSDH PV + + Sbjct: 241 CAETGIDYDIRSMEKPSDHAPVWATFRV 268 >gi|295676960|ref|YP_003605484.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1002] gi|295436803|gb|ADG15973.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1002] Length = 283 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 84/258 (32%), Positives = 132/258 (51%), Gaps = 1/258 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 V +ATWNVNS++ R ++ W+ + D++CLQE K D+ FP L+++ Y GQK Sbjct: 26 VKIATWNVNSLKVRQQHVIDWLASSGTDVLCLQELKLPDEKFPRAELEAVGYRSWYAGQK 85 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGV IL + + + ++ + +RI + Y P+G + K Sbjct: 86 TYNGVGILVREG-VNVDESSIVRNIPGFEDPQQRVIAATVDGVRIISAYFPNGQAPGTDK 144 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W+ + + + L L GDYNI P+ D ++P WE + E R +F Sbjct: 145 FAYKLRWLDALHDWLATEMTLHPKLALLGDYNIAPEDRDVHDPKAWEGQNLVSPEERAAF 204 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +L +G DA R +YS+WDY ++ +N G+RIDHI+LS + + + ID Sbjct: 205 VRLIGLGLLDAFRQFEQQEKIYSWWDYRMMAFRRNAGLRIDHILLSKALSDICKACDIDK 264 Query: 244 KPRGWTKPSDHTPVIVSL 261 PR W +PSDH PV L Sbjct: 265 VPRKWDQPSDHAPVFAQL 282 >gi|240949558|ref|ZP_04753897.1| exonuclease III [Actinobacillus minor NM305] gi|257465617|ref|ZP_05629988.1| exonuclease III [Actinobacillus minor 202] gi|240295999|gb|EER46665.1| exonuclease III [Actinobacillus minor NM305] gi|257451277|gb|EEV25320.1| exonuclease III [Actinobacillus minor 202] Length = 267 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 83/267 (31%), Positives = 127/267 (47%), Gaps = 8/267 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A I+++ PD+I LQE K D++FP++ + L YH+ GQK Sbjct: 1 MKFISFNINGLRARPHQLEAIIEKHQPDVIGLQEIKVADEDFPYDLVNHLGYHVFHHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122 + GVA+L+K P+ + P D D Q R I A TL + N Y P G + T Sbjct: 61 GHYGVALLTKKAPLAVRKGFPTDAEDAQKRMIMADIETEFGTLTVLNGYFPQGENRSHET 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + + +L+ E P+I GD NI P + + F Sbjct: 121 KFPAKAKFYADLQHYLENQLKPENPIIIMGDMNISPTDLDIGIGEANRKRWLRDGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +L G D RA + +S++DY + + N+G+RID ++ S Sbjct: 181 PEEREWLDRLYGYGLVDTFRAMNPLAADKFSWFDYRSKGFDDNRGLRIDLVLASKSLAER 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262 ID + R KPSDH+PV Sbjct: 241 CVETGIDLEIRAMEKPSDHSPVWAVFK 267 >gi|194099379|ref|YP_002002479.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae NCCP11945] gi|240014802|ref|ZP_04721715.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae DGI18] gi|240116328|ref|ZP_04730390.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae PID18] gi|240121325|ref|ZP_04734287.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae PID24-1] gi|268601995|ref|ZP_06136162.1| exodeoxyribonuclease III [Neisseria gonorrhoeae PID18] gi|193934669|gb|ACF30493.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae NCCP11945] gi|268586126|gb|EEZ50802.1| exodeoxyribonuclease III [Neisseria gonorrhoeae PID18] Length = 256 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 91/260 (35%), Positives = 136/260 (52%), Gaps = 4/260 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + TWNVNS+ R+ + + +N PDI+ LQE K + FP LQ + +H GQK Sbjct: 1 MKITTWNVNSLNVRLPQVQNLLADNPPDILVLQELKLDQDKFPAAALQMMGWHCVWSGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAI+S+ P ++ LP D Q R I AT +R+ N+Y +G + S K Sbjct: 61 TYNGVAIVSRSVPQDVHFGLPSLPDDPQRRVIAATVGG----VRVINVYCVNGEALDSPK 116 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K W F + L+ GD+NI P DCY+P W + RQ F Sbjct: 117 FKYKEQWFAALTEFVRDEMTRHGKLVLLGDFNIAPADADCYDPEKWYEKIHCSSVERQWF 176 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q L ++G TD++R H Y+++DY + + G+RIDHI+++ E ++L RID Sbjct: 177 QNLLDLGLTDSLRQVHPEGAFYTWFDYRGAMFQRKLGLRIDHILVTSEMAAVLKDVRIDL 236 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 + R +PSDH PV D+ Sbjct: 237 ETRALERPSDHAPVAAEFDL 256 >gi|84393754|ref|ZP_00992502.1| exodeoxyribonuclease III [Vibrio splendidus 12B01] gi|84375616|gb|EAP92515.1| exodeoxyribonuclease III [Vibrio splendidus 12B01] Length = 268 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 78/268 (29%), Positives = 132/268 (49%), Gaps = 9/268 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V ++N+N +RAR+H L A I ++ PD+I LQE K D+ FP ++++ Y + GQK Sbjct: 1 MKVISFNINGLRARLHQLQAIIDKHQPDVIGLQEIKVHDEAFPLADVEAMGYKVYFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121 ++ GVA+L K +P+ + P ++ + + N + + + N Y P G+ I Sbjct: 61 AHYGVAMLCKQEPVSVQKGFPTDNEDHQKRMIMATFEDENGEKVTVLNGYFPQGDNIKHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175 TKY K + K + + + +E +I GD NI P + F Sbjct: 121 TKYPYKREFYKDLMTYLNDYHNKDEQVIVMGDINISPTDIDIGIGEPNAKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R+ + L + GF D+ R H + YS++DY + + N+G+RID ++ + + Sbjct: 181 QPEEREWLKTLMDWGFVDSFRLLHPEVNDQYSWFDYRSKGFVDNRGLRIDVVLATQKLAD 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 A ID + RG KPSDH P+ + Sbjct: 241 KCTEAGIDYELRGIEKPSDHAPIWSTFK 268 >gi|218695307|ref|YP_002402974.1| exonuclease III [Escherichia coli 55989] gi|331668438|ref|ZP_08369286.1| exodeoxyribonuclease III [Escherichia coli TA271] gi|218352039|emb|CAU97776.1| exonuclease III [Escherichia coli 55989] gi|323948123|gb|EGB44113.1| exodeoxyribonuclease III [Escherichia coli H120] gi|324119235|gb|EGC13123.1| exodeoxyribonuclease III [Escherichia coli E1167] gi|331063632|gb|EGI35543.1| exodeoxyribonuclease III [Escherichia coli TA271] Length = 268 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 78/266 (29%), Positives = 123/266 (46%), Gaps = 8/266 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A ++++ PD+I LQETK D FP E + L Y++ GQK Sbjct: 1 MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 + GVA+L+K PI + PGDD + Q R I A + + N Y P G Sbjct: 61 GHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSPLGNVTVINGYFPQGESRDHPI 120 Query: 124 -YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 + K + + + L+ + P++ GD NI P + + F Sbjct: 121 KFPAKAQFYQNLQNYLETELKRDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +L + G D R + +S++DY + + N+G+RID ++ S Sbjct: 181 PEEREWMDRLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAEC 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 ID + R KPSDH PV + Sbjct: 241 CVETGIDYEIRSMEKPSDHAPVWATF 266 >gi|332161914|ref|YP_004298491.1| exonuclease III [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|318605567|emb|CBY27065.1| exodeoxyribonuclease III [Yersinia enterocolitica subsp. palearctica Y11] gi|325666144|gb|ADZ42788.1| exonuclease III [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|330859743|emb|CBX70078.1| exodeoxyribonuclease III [Yersinia enterocolitica W22703] Length = 268 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 83/268 (30%), Positives = 128/268 (47%), Gaps = 8/268 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H LAA I+++ PD+I LQETK D FP E + YH+ GQK Sbjct: 1 MKFVSFNINGLRARPHQLAAIIEQHQPDVIGLQETKVHDDMFPLEEVSQHGYHVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 + GVA+L+K +P+ + P D+ D Q R I A L + N Y P G Sbjct: 61 GHYGVALLTKNEPLAVRRGFPTDEEDAQRRIIMADIATPQGPLTVINGYFPQGESRDHPI 120 Query: 124 -YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 + K + ++ Q+L + ++ GD NI P D + F Sbjct: 121 KFPAKERFYADLQQYLEQQLSADAQVLIMGDLNISPTDLDIGIGEDSRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R ++LQN G D RA + + +S++DY + + +N+G+RID ++ S + Sbjct: 181 PEERAWLERLQNWGLVDTFRAANPDCNDQFSWFDYRSRGFDENRGLRIDLLLASRPLAAR 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + ID R KPSDH PV + Sbjct: 241 CIATGIDYDIRSMEKPSDHAPVWSEFAV 268 >gi|323978068|gb|EGB73154.1| exodeoxyribonuclease III [Escherichia coli TW10509] Length = 268 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 77/266 (28%), Positives = 122/266 (45%), Gaps = 8/266 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A ++++ PD+I LQETK D FP E + L Y++ GQK Sbjct: 1 MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 + GVA+L+K PI + P D + Q R I A + + N Y P G Sbjct: 61 GHYGVALLTKETPIAVRRGFPDDGEEAQRRIIMAEIPSPLGNVTVINGYFPQGESRDHPI 120 Query: 124 -YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 + K + + + L+ E P++ GD NI P + + F Sbjct: 121 KFPAKAQFYQNLQNYLETELKRENPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ ++L + G D R + +S++DY + + N+G+RID ++ S Sbjct: 181 PEEREWMERLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLADC 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 ID + R KPSDH PV + Sbjct: 241 CVETGIDYEIRSMEKPSDHAPVWATF 266 >gi|56479910|ref|NP_707364.2| exonuclease III [Shigella flexneri 2a str. 301] gi|56383461|gb|AAN43071.2| exonuclease III [Shigella flexneri 2a str. 301] Length = 268 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 78/266 (29%), Positives = 123/266 (46%), Gaps = 8/266 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A ++++ PD+I LQETK D FP E + L Y++ GQK Sbjct: 1 MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 + GVA+L+K PI + PGDD + Q R I A + + N Y P G Sbjct: 61 GHYGVALLTKETPIAVRRGFPGDDEETQRRIIMAEIPSLLGNVTVINGYFPQGESRDHPI 120 Query: 124 -YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 + K + + + L+ + P++ GD NI P + + F Sbjct: 121 KFPAKAQFYQNLQNYLETELKRDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +L + G D R + +S++DY + + N+G+RID ++ S Sbjct: 181 PEEREWMDRLMSWGVVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAEC 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 ID + R KPSDH PV + Sbjct: 241 CVETGIDYEIRSMEKPSDHAPVWATF 266 >gi|56552297|ref|YP_163136.1| exodeoxyribonuclease III Xth [Zymomonas mobilis subsp. mobilis ZM4] gi|56543871|gb|AAV90025.1| exodeoxyribonuclease III Xth [Zymomonas mobilis subsp. mobilis ZM4] Length = 261 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 113/260 (43%), Positives = 160/260 (61%), Gaps = 6/260 (2%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64 +A++NVN I AR+ L W+++ PDI+CLQE K++D FP E ++ Y+ GQK+ Sbjct: 3 KIASFNVNGINARLPRLIEWLEKFQPDILCLQELKSDDARFPQEEIEKTGYYCLYHGQKA 62 Query: 65 YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124 YNGVAILSK QP I T LP D Q+R+IEA L + +LYLP+GNP+ S KY Sbjct: 63 YNGVAILSKEQPKLIRTSLPDDPDPTQSRYIEAEID----NLTVASLYLPNGNPLNSPKY 118 Query: 125 DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH--DCYNPIIWENDACFTLEVRQS 182 D K++W K FL A + E+P+I AGDYN++P D N ++A E Sbjct: 119 DYKLAWFKAFLAHARSLWQQEKPVILAGDYNVVPSFDIKDIRNAAALADNALLAPESLFY 178 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 +++L MG+TD++R H + LYSFWDY A SW ++ G+RIDHI+L+P+ L + +D Sbjct: 179 WRQLLAMGWTDSLRVRHPSEPLYSFWDYQAQSWPRDDGMRIDHILLTPDLADGLTDSGVD 238 Query: 243 TKPRGWTKPSDHTPVIVSLD 262 + RG K SDH PV + +D Sbjct: 239 RQMRGQEKASDHAPVWIEID 258 >gi|240113324|ref|ZP_04727814.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae MS11] gi|260439854|ref|ZP_05793670.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae DGI2] gi|268599400|ref|ZP_06133567.1| exodeoxyribonuclease III [Neisseria gonorrhoeae MS11] gi|291043128|ref|ZP_06568851.1| exodeoxyribonuclease III [Neisseria gonorrhoeae DGI2] gi|268583531|gb|EEZ48207.1| exodeoxyribonuclease III [Neisseria gonorrhoeae MS11] gi|291012734|gb|EFE04717.1| exodeoxyribonuclease III [Neisseria gonorrhoeae DGI2] Length = 256 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 91/260 (35%), Positives = 136/260 (52%), Gaps = 4/260 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + TWNVNS+ R+ + + +N PDI+ LQE K + FP LQ + +H GQK Sbjct: 1 MKITTWNVNSLNVRLPQVQNLLADNPPDILVLQELKLDQDKFPAAALQMMGWHCVWSGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAI+S+ P ++ LP D Q R I AT +R+ N+Y +G + S K Sbjct: 61 TYNGVAIVSRSVPQDVHFGLPSLPDDPQRRVIAATVGG----VRVINVYCVNGEALDSPK 116 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K W F + L+ GD+NI P DCY+P W + RQ F Sbjct: 117 FKYKEQWFAALTEFVRDEMSRHGKLVLLGDFNIAPADADCYDPEKWYEKIHCSSVERQWF 176 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q L ++G TD++R H Y+++DY + + G+RIDHI+++ E ++L RID Sbjct: 177 QNLLDLGLTDSLRQVHPEGAFYTWFDYRGAMFQRKLGLRIDHILVTSEMAAVLKDVRIDL 236 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 + R +PSDH PV D+ Sbjct: 237 ETRALERPSDHAPVAAEFDL 256 >gi|124267258|ref|YP_001021262.1| exodeoxyribonuclease III [Methylibium petroleiphilum PM1] gi|124260033|gb|ABM95027.1| Exodeoxyribonuclease III [Methylibium petroleiphilum PM1] Length = 256 Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats. Identities = 82/258 (31%), Positives = 135/258 (52%), Gaps = 5/258 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ R+ + W+ N D + LQETK D FP +++ Y ++ GQK Sbjct: 1 MRLATWNVNSLAVRLPQVLDWLTANPVDALVLQETKLTDDKFPRAEIEAAGYAVQWFGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVA+LS+ ++ ++ G + +R+ Y P+G S K Sbjct: 61 TYNGVALLSREPAHDVTKNIFGFADEQARVIAGTVDG-----VRVIGAYFPNGQAPDSEK 115 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K++W++ + L L+ GD+NI P+ D ++P++W T + R+ F Sbjct: 116 FTYKMAWLQALRDWVRSELAAHPRLVLMGDFNIAPEDRDVHDPVLWAGQIHCTPQEREHF 175 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 ++L +G DA R +S+WDY ++ KN+G+RIDHI++S + + ID Sbjct: 176 RELIALGLVDAFRLFEQPPKSWSWWDYRNLAFRKNQGLRIDHILVSEALRPAVSACMIDK 235 Query: 244 KPRGWTKPSDHTPVIVSL 261 PR +PSDH PV+V L Sbjct: 236 LPRKNERPSDHAPVVVEL 253 >gi|296393768|ref|YP_003658652.1| exodeoxyribonuclease III Xth [Segniliparus rotundus DSM 44985] gi|296180915|gb|ADG97821.1| exodeoxyribonuclease III Xth [Segniliparus rotundus DSM 44985] Length = 267 Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 79/266 (29%), Positives = 126/266 (47%), Gaps = 7/266 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+NSIRAR AW++ + D++ LQETK + FP + Y + G Sbjct: 1 MRIATWNINSIRARADRAVAWLERSQVDVLALQETKCANAQFPEAPFREAGYAVAHTGNG 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-----TQTLRIGNLYLPHGNP 118 +NGVAI+S+ ++ G + A +RI +LY+P+G Sbjct: 61 QWNGVAIVSRLGLGDVRIGFDGQPGFHKDPEAPAEPEPRAIAATCGGVRIWSLYVPNGRD 120 Query: 119 ITSTKYDDKISWIKRFLRFASQRL--ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + Y K+ W+ A L + E + AGD+NI P D ++P ++E + Sbjct: 121 LADRHYRYKLDWLAALKDQAEGWLAADPEAKIALAGDWNIAPFDEDVWDPSLFEGKTHTS 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 R +F + GFTD R LY++WDY + + +G+RID ++ SP + Sbjct: 181 APERAAFFAFEQAGFTDVARPHTPGPGLYTYWDYTQLRFPRREGMRIDFVLGSPALARAV 240 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLD 262 A +D + R SDH PV+V L+ Sbjct: 241 QGASVDREERKGKGASDHAPVVVDLE 266 >gi|330431149|gb|AEC16208.1| exonuclease III [Gallibacterium anatis UMN179] Length = 267 Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 82/267 (30%), Positives = 121/267 (45%), Gaps = 8/267 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L I + PD++ LQE K D+ FP E + L YH+ GQK Sbjct: 1 MKFISFNINGLRARPHQLHQLIAQYQPDVLGLQEIKVADEAFPHEIVADLGYHVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122 S+ GVA+L+K QP+ + P D D Q R I A L + N Y P G + T Sbjct: 61 SHYGVALLTKQQPLAVRKGFPTDAEDAQRRIIMADLATPFGQLTVINGYFPQGENRSHET 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + + + + P++ GD NI P + + F Sbjct: 121 KFPAKEKFYRDLQHYLVKEHNAANPVLVMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ Q L G D RA H + +S++DY + + N+G+RID I+ + Sbjct: 181 PEEREWLQNLYQYGLVDTFRALHPQVNDQFSWFDYRSKGFDDNRGLRIDLILANQALAQR 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262 SA I R KPSDH P+ Sbjct: 241 CISAGIAKDIRAMEKPSDHAPIWAEFK 267 >gi|308375155|ref|ZP_07442904.2| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis SUMu007] gi|308376392|ref|ZP_07438692.2| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis SUMu008] gi|308347245|gb|EFP36096.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis SUMu007] gi|308351175|gb|EFP40026.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis SUMu008] Length = 273 Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 78/266 (29%), Positives = 126/266 (47%), Gaps = 7/266 (2%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 ++ +ATWNVNSIR R+ + W+ + D++ +QETK D FP L L Y + G Sbjct: 5 LLRLATWNVNSIRTRLDRVLDWLGRADVDVLAMQETKCPDGQFPALPLFELGYDVAHVGF 64 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-----TQTLRIGNLYLPHGN 117 +NGVAI S+ ++ G + AT +R+ +LY+P+G Sbjct: 65 DQWNGVAIASRVGLDDVRVGFDGQPSWSGKPEVAATTEARALGATCGGIRVWSLYVPNGR 124 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEE--PLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + Y K+ W+ A L + P+ GD+NI P D ++ + Sbjct: 125 ALDDPHYTYKLDWLAALRDTAEGWLRDDPAAPIALMGDWNIAPTDDDVWSTEFFAGCTHV 184 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 + R++F + + FTD +R +Y++WDY + K +G+RID I+ SP + Sbjct: 185 SEPERKAFNAIVDAQFTDVVRPFTPGPGVYTYWDYTQLRFPKKQGMRIDFILGSPALAAR 244 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 + A+I + R PSDH PV+V L Sbjct: 245 VMDAQIVREERKGKAPSDHAPVLVDL 270 >gi|302186191|ref|ZP_07262864.1| exonuclease III [Pseudomonas syringae pv. syringae 642] Length = 270 Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 89/269 (33%), Positives = 134/269 (49%), Gaps = 11/269 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +RAR H LAA I ++ PD+I LQETK D+ FP +++L YH+ GQK Sbjct: 1 MKIVSFNINGLRARPHQLAALIDKHQPDVIGLQETKVSDEQFPQAEVEALGYHVHFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122 + GVA+LS+ P+ + GDD D Q RFI T+ N Q + I N Y P G Sbjct: 61 GHYGVALLSRNAPLALHKGFEGDDEDSQKRFIWGTYADSNGQPVTIMNGYFPQGESRDHP 120 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175 K+ K + + + ++PLI GD NI PQ D + F Sbjct: 121 TKFPAKQRFYENLQTLLESQFRNDQPLIVMGDVNISPQDCDIGIGADNAKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232 E R+ ++L++ G D R + +S++DY + + +G+RID IM S Sbjct: 181 LPEEREWMERLKSWGLVDTFRHLYPEVVDRFSWFDYRSRGFEDEPKRGLRIDLIMTSTGL 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + A +D RG KPSDH P+ + L Sbjct: 241 QPRIKEAGVDYDLRGMEKPSDHAPIWLEL 269 >gi|269796800|ref|YP_003316255.1| exodeoxyribonuclease III [Sanguibacter keddieii DSM 10542] gi|269098985|gb|ACZ23421.1| Exodeoxyribonuclease III [Sanguibacter keddieii DSM 10542] Length = 263 Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 80/261 (30%), Positives = 130/261 (49%), Gaps = 3/261 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+NSIRAR+ A+++ + D++ LQETK +D FPFE ++ Y + G Sbjct: 1 MRLATWNINSIRARVDRAVAFLERSGTDVLALQETKAKDSQFPFEAFEAAGYEVAHFGLS 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT-LRIGNLYLPHGNPITST 122 +NGVAI+S+ ++ P + +EA T +R+ +LY+PHG + + Sbjct: 61 QWNGVAIISRVGLEDVSLGFPDQPQFGEEPVVEARAIGATCGGVRVWSLYVPHGRALDNP 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIF--AGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 Y K+ W+ A +E + GD+N+ P+ D ++ ++E + R Sbjct: 121 HYAYKLDWLSTLRGHAQSWVEADPQAKVALVGDWNVAPRDTDVWDMAVFEGQTHVSQPER 180 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 +F + G+T+ R Y++WDY + KN+G+RID SP TS + Sbjct: 181 DAFAAFEGAGYTEVSREFVPEDRKYTYWDYQQLRFPKNQGLRIDFAYTSPALTSAVTGVE 240 Query: 241 IDTKPRGWTKPSDHTPVIVSL 261 ID R SDH PVIV + Sbjct: 241 IDRDERKGKGASDHVPVIVDI 261 >gi|198282497|ref|YP_002218818.1| exodeoxyribonuclease III Xth [Acidithiobacillus ferrooxidans ATCC 53993] gi|218667378|ref|YP_002424687.1| exodeoxyribonuclease III [Acidithiobacillus ferrooxidans ATCC 23270] gi|198247018|gb|ACH82611.1| exodeoxyribonuclease III Xth [Acidithiobacillus ferrooxidans ATCC 53993] gi|218519591|gb|ACK80177.1| exodeoxyribonuclease III [Acidithiobacillus ferrooxidans ATCC 23270] Length = 257 Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 85/259 (32%), Positives = 128/259 (49%), Gaps = 5/259 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS++ R+ + W+ PD++CLQETK D FP L Y GQ Sbjct: 1 MKIATWNVNSLKVRLPQVLEWLGSEQPDVLCLQETKLADARFPVAELADAGYRALYHGQP 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAILS+ P ++ P + LR+ N+Y+P+G + S K Sbjct: 61 TYNGVAILSRTSPSDVRCDWPDGGDGQARLCAASFGD-----LRVVNVYVPNGQALDSDK 115 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W++R + L+ L+ GD+NI P D Y+ W + R + Sbjct: 116 YPYKLQWLERLRGLIAGELQGWPQLLLVGDFNIAPDTRDVYDAAEWGEGILCSAPERAAL 175 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 L +G D+ R H +S+WDY A ++ +N+G+RID I+ S S ID Sbjct: 176 GALLELGLHDSYRKMHPDARAWSWWDYRAAAFRRNQGLRIDLILASSPVLSRTREVVIDR 235 Query: 244 KPRGWTKPSDHTPVIVSLD 262 R +PSDH PV ++L+ Sbjct: 236 AARAAERPSDHAPVCITLE 254 >gi|209520714|ref|ZP_03269463.1| exodeoxyribonuclease III Xth [Burkholderia sp. H160] gi|209498839|gb|EDZ98945.1| exodeoxyribonuclease III Xth [Burkholderia sp. H160] Length = 258 Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 83/258 (32%), Positives = 133/258 (51%), Gaps = 1/258 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS++ R ++ W+ + D++CLQE K D+ FP L+++ Y GQK Sbjct: 1 MKIATWNVNSLKVRQQHVIDWLASSGTDVLCLQELKLPDEKFPRAELEAIGYRSWYAGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGV IL + + + + ++ + + +RI + Y P+G + K Sbjct: 61 TYNGVGILVR-EGLNVDESSIVRNIPGFEDQQQRVIAATVEGVRIISAYFPNGQAPGTDK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W+ + S L L GDYNI P+ D ++P WE + E R +F Sbjct: 120 FAYKLRWLDALHDWLSTETTLHPKLALLGDYNIAPEDRDVHDPKAWEGQNLVSPEERAAF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +L +G DA R +YS+WDY ++ +N G+RIDHI+LS + + + +D Sbjct: 180 VRLIALGLLDAFRQFEQPEKIYSWWDYRMMAFRRNAGLRIDHILLSKALSDICTACDVDK 239 Query: 244 KPRGWTKPSDHTPVIVSL 261 PR W +PSDH PV L Sbjct: 240 VPRKWDQPSDHAPVFAQL 257 >gi|85059341|ref|YP_455043.1| exonuclease III [Sodalis glossinidius str. 'morsitans'] gi|84779861|dbj|BAE74638.1| exodeoxyribonuclease III [Sodalis glossinidius str. 'morsitans'] Length = 268 Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 83/268 (30%), Positives = 123/268 (45%), Gaps = 8/268 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A I PD+I LQETK D FP E + YH+ GQK Sbjct: 1 MKFVSFNINGLRARPHQLEAIITTLQPDVIGLQETKVHDDMFPLEEVSRHGYHVYYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122 + GVA+LS+ +P+ I D + Q R I A F L + N Y P G Sbjct: 61 GHYGVALLSREKPLAIRRGFSTDGAEAQRRIIMADFLTPKGALTVVNGYFPQGENRDHPL 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + + + Q E L+ GD NI P + + F Sbjct: 121 KFPAKERFYRDLQGYVEQSHHGESLLLIMGDMNISPTDLDIGIGEESRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHH-LYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R ++L + G D R + T YS++DY + + +N+G+RID ++ S ++ Sbjct: 181 PEERAWMERLLSWGLVDTYRQANPTDDSRYSWFDYRSRGFDENRGLRIDLLLASKPLAAV 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + +A ID R KPSDH PV + Sbjct: 241 VRAAGIDYTIRAMDKPSDHAPVWADFAL 268 >gi|239994244|ref|ZP_04714768.1| exodeoxyribonuclease III [Alteromonas macleodii ATCC 27126] Length = 269 Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 84/268 (31%), Positives = 132/268 (49%), Gaps = 9/268 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V ++N+N IRAR+H L A I + PDII LQE K ++ FP E ++++ YH+ GQK Sbjct: 1 MKVISFNINGIRARLHQLQAVIDAHQPDIIGLQEIKVHNEQFPVEAVEAMGYHVYFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLD-VQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121 S+ GVA L+K +P+ + P DD D + I T + + + N Y P G Sbjct: 61 SHYGVAFLAKKEPLSVSMGFPTDDEDAQRRMIILKTTDDAGEPVTVLNGYFPQGENEKHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175 TKY K + K + + ++ +I GD NI D + F Sbjct: 121 TKYPAKRKFYKDLMTYLDDNHTPDDNVIVMGDVNISHTDLDIGIGEDNRKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R+ + + GF D+ R + + +S++DY + ++ N+G+RID I+ + + Sbjct: 181 LPEEREWLNTVIDWGFEDSFRTLNPETNDKFSWFDYRSKGFNDNRGLRIDLILATKPLHA 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 LH A ID + RG KPSDH P+ Sbjct: 241 KLHDAGIDYELRGIEKPSDHAPIWAEYK 268 >gi|24374562|ref|NP_718605.1| exonuclease III [Shewanella oneidensis MR-1] gi|24349161|gb|AAN56049.1|AE015740_3 exodeoxyribonuclease III [Shewanella oneidensis MR-1] Length = 270 Score = 203 bits (516), Expect = 3e-50, Method: Composition-based stats. Identities = 85/268 (31%), Positives = 132/268 (49%), Gaps = 9/268 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +R+R+H L A I + PDII LQETK D+ FP ++++ YH+ G K Sbjct: 1 MKIVSFNINGLRSRLHQLQALIDSHQPDIIGLQETKVHDEAFPLAEVEAMGYHVHYHGGK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122 ++ GVA+LSK P+++ D+ D Q R I TF N + L + N Y P G I Sbjct: 61 AHYGVAMLSKVAPLKVQKGFATDEEDAQRRMIIGTFAQANGRPLTVLNGYFPQGESIDHP 120 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175 KY K + + + +E + GD NI P D + F Sbjct: 121 TKYPAKRKFYQDLMAHLHANHSNDEDIAIIGDINISPIDLDIGIGEVNRKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R+ + LQ+ G D R H YS++DY + + N+G+RID I+ +P + Sbjct: 181 QPEEREWLKTLQDWGLVDTFRQLHPDRSERYSWFDYRSKGFDDNRGLRIDVILATPSLAA 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 L + +D + RG KPSDH P+ + Sbjct: 241 RLVESDVDYELRGIDKPSDHAPIWSTFK 268 >gi|218699684|ref|YP_002407313.1| exonuclease III [Escherichia coli IAI39] gi|218369670|emb|CAR17439.1| exonuclease III [Escherichia coli IAI39] Length = 268 Score = 203 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 77/266 (28%), Positives = 122/266 (45%), Gaps = 8/266 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A ++++ PD+I LQETK D FP E + L Y++ GQK Sbjct: 1 MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 + GVA+L+K PI + P D + Q R I A + + N Y P G Sbjct: 61 GHYGVALLTKETPIAVRRGFPDDGEEAQRRIIIAEIPSPLGNVTVINGYFPQGESRDHPI 120 Query: 124 -YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 + K + + + L+ E P++ GD NI P + + F Sbjct: 121 KFPAKAQFYQNLQNYLETELKRENPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ ++L + G D R + +S++DY + + N+G+RID ++ S Sbjct: 181 PEEREWMERLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAEC 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 ID + R KPSDH PV + Sbjct: 241 CVETGIDYEIRSMEKPSDHAPVWATF 266 >gi|16129703|ref|NP_416263.1| exonuclease III [Escherichia coli str. K-12 substr. MG1655] gi|74311932|ref|YP_310351.1| exonuclease III [Shigella sonnei Ss046] gi|82543848|ref|YP_407795.1| exonuclease III [Shigella boydii Sb227] gi|89108588|ref|AP_002368.1| exonuclease III [Escherichia coli str. K-12 substr. W3110] gi|157157800|ref|YP_001463047.1| exonuclease III [Escherichia coli E24377A] gi|157161211|ref|YP_001458529.1| exonuclease III [Escherichia coli HS] gi|170081406|ref|YP_001730726.1| exonuclease III [Escherichia coli str. K-12 substr. DH10B] gi|187730490|ref|YP_001880544.1| exonuclease III [Shigella boydii CDC 3083-94] gi|188495310|ref|ZP_03002580.1| exodeoxyribonuclease III [Escherichia coli 53638] gi|191169042|ref|ZP_03030806.1| exodeoxyribonuclease III [Escherichia coli B7A] gi|193065803|ref|ZP_03046866.1| exodeoxyribonuclease III [Escherichia coli E22] gi|193068936|ref|ZP_03049895.1| exodeoxyribonuclease III [Escherichia coli E110019] gi|194428570|ref|ZP_03061109.1| exodeoxyribonuclease III [Escherichia coli B171] gi|194438505|ref|ZP_03070594.1| exodeoxyribonuclease III [Escherichia coli 101-1] gi|209919111|ref|YP_002293195.1| exonuclease III [Escherichia coli SE11] gi|218554315|ref|YP_002387228.1| exonuclease III [Escherichia coli IAI1] gi|238900963|ref|YP_002926759.1| exonuclease III [Escherichia coli BW2952] gi|254161808|ref|YP_003044916.1| exonuclease III [Escherichia coli B str. REL606] gi|256018057|ref|ZP_05431922.1| exonuclease III [Shigella sp. D9] gi|256022587|ref|ZP_05436452.1| exonuclease III [Escherichia sp. 4_1_40B] gi|260844099|ref|YP_003221877.1| exonuclease III [Escherichia coli O103:H2 str. 12009] gi|260855614|ref|YP_003229505.1| exonuclease III [Escherichia coli O26:H11 str. 11368] gi|260868274|ref|YP_003234676.1| exonuclease III [Escherichia coli O111:H- str. 11128] gi|293446121|ref|ZP_06662543.1| exodeoxyribonuclease III [Escherichia coli B088] gi|297518661|ref|ZP_06937047.1| exonuclease III [Escherichia coli OP50] gi|301020970|ref|ZP_07185022.1| exodeoxyribonuclease III [Escherichia coli MS 196-1] gi|307138408|ref|ZP_07497764.1| exonuclease III [Escherichia coli H736] gi|307310679|ref|ZP_07590325.1| exodeoxyribonuclease III [Escherichia coli W] gi|312969777|ref|ZP_07783960.1| exodeoxyribonuclease III [Escherichia coli 1827-70] gi|2506193|sp|P09030|EX3_ECOLI RecName: Full=Exodeoxyribonuclease III; Short=EXO III; Short=Exonuclease III; AltName: Full=AP endonuclease VI gi|157829928|pdb|1AKO|A Chain A, Exonuclease Iii From Escherichia Coli gi|43312|emb|CAA31424.1| exonuclease III [Escherichia coli K-12] gi|1742858|dbj|BAA15540.1| exonuclease III [Escherichia coli str. K12 substr. W3110] gi|1788046|gb|AAC74819.1| exonuclease III [Escherichia coli str. K-12 substr. MG1655] gi|73855409|gb|AAZ88116.1| exonuclease III [Shigella sonnei Ss046] gi|81245259|gb|ABB65967.1| exonuclease III [Shigella boydii Sb227] gi|157066891|gb|ABV06146.1| exodeoxyribonuclease III [Escherichia coli HS] gi|157079830|gb|ABV19538.1| exodeoxyribonuclease III [Escherichia coli E24377A] gi|169889241|gb|ACB02948.1| exonuclease III [Escherichia coli str. K-12 substr. DH10B] gi|187427482|gb|ACD06756.1| exodeoxyribonuclease III [Shigella boydii CDC 3083-94] gi|188490509|gb|EDU65612.1| exodeoxyribonuclease III [Escherichia coli 53638] gi|190900924|gb|EDV60709.1| exodeoxyribonuclease III [Escherichia coli B7A] gi|192926575|gb|EDV81206.1| exodeoxyribonuclease III [Escherichia coli E22] gi|192957731|gb|EDV88175.1| exodeoxyribonuclease III [Escherichia coli E110019] gi|194413448|gb|EDX29731.1| exodeoxyribonuclease III [Escherichia coli B171] gi|194422515|gb|EDX38513.1| exodeoxyribonuclease III [Escherichia coli 101-1] gi|209912370|dbj|BAG77444.1| exonuclease III [Escherichia coli SE11] gi|218361083|emb|CAQ98666.1| exonuclease III [Escherichia coli IAI1] gi|238861051|gb|ACR63049.1| exonuclease III [Escherichia coli BW2952] gi|242377470|emb|CAQ32223.1| exonuclease III [Escherichia coli BL21(DE3)] gi|253973709|gb|ACT39380.1| exonuclease III [Escherichia coli B str. REL606] gi|253977903|gb|ACT43573.1| exonuclease III [Escherichia coli BL21(DE3)] gi|257754263|dbj|BAI25765.1| exonuclease III [Escherichia coli O26:H11 str. 11368] gi|257759246|dbj|BAI30743.1| exonuclease III [Escherichia coli O103:H2 str. 12009] gi|257764630|dbj|BAI36125.1| exonuclease III [Escherichia coli O111:H- str. 11128] gi|291322951|gb|EFE62379.1| exodeoxyribonuclease III [Escherichia coli B088] gi|299881725|gb|EFI89936.1| exodeoxyribonuclease III [Escherichia coli MS 196-1] gi|306908857|gb|EFN39353.1| exodeoxyribonuclease III [Escherichia coli W] gi|309701971|emb|CBJ01285.1| exodeoxyribonuclease III [Escherichia coli ETEC H10407] gi|310338062|gb|EFQ03151.1| exodeoxyribonuclease III [Escherichia coli 1827-70] gi|320173600|gb|EFW48793.1| Exodeoxyribonuclease III [Shigella dysenteriae CDC 74-1112] gi|320184212|gb|EFW59027.1| Exodeoxyribonuclease III [Shigella flexneri CDC 796-83] gi|320197933|gb|EFW72541.1| Exodeoxyribonuclease III [Escherichia coli EC4100B] gi|323153006|gb|EFZ39275.1| exodeoxyribonuclease III [Escherichia coli EPECa14] gi|323158544|gb|EFZ44559.1| exodeoxyribonuclease III [Escherichia coli E128010] gi|323166246|gb|EFZ52021.1| exodeoxyribonuclease III [Shigella sonnei 53G] gi|323175176|gb|EFZ60790.1| exodeoxyribonuclease III [Escherichia coli LT-68] gi|323180528|gb|EFZ66073.1| exodeoxyribonuclease III [Escherichia coli 1180] gi|323186233|gb|EFZ71585.1| exodeoxyribonuclease III [Escherichia coli 1357] gi|323378375|gb|ADX50643.1| exodeoxyribonuclease III [Escherichia coli KO11] gi|323937007|gb|EGB33287.1| exodeoxyribonuclease III [Escherichia coli E1520] gi|323940585|gb|EGB36776.1| exodeoxyribonuclease III [Escherichia coli E482] gi|323962060|gb|EGB57657.1| exodeoxyribonuclease III [Escherichia coli H489] gi|323974008|gb|EGB69179.1| exodeoxyribonuclease III [Escherichia coli TA007] gi|332096300|gb|EGJ01301.1| exodeoxyribonuclease III [Shigella boydii 3594-74] gi|332101449|gb|EGJ04795.1| exonuclease III [Shigella sp. D9] Length = 268 Score = 203 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 78/266 (29%), Positives = 123/266 (46%), Gaps = 8/266 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A ++++ PD+I LQETK D FP E + L Y++ GQK Sbjct: 1 MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 + GVA+L+K PI + PGDD + Q R I A + + N Y P G Sbjct: 61 GHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSLLGNVTVINGYFPQGESRDHPI 120 Query: 124 -YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 + K + + + L+ + P++ GD NI P + + F Sbjct: 121 KFPAKAQFYQNLQNYLETELKRDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +L + G D R + +S++DY + + N+G+RID ++ S Sbjct: 181 PEEREWMDRLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAEC 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 ID + R KPSDH PV + Sbjct: 241 CVETGIDYEIRSMEKPSDHAPVWATF 266 >gi|319942253|ref|ZP_08016568.1| exodeoxyribonuclease III Xth [Sutterella wadsworthensis 3_1_45B] gi|319804126|gb|EFW01026.1| exodeoxyribonuclease III Xth [Sutterella wadsworthensis 3_1_45B] Length = 269 Score = 203 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 80/269 (29%), Positives = 128/269 (47%), Gaps = 6/269 (2%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 MS + +A+WNVNS++ R+ + W++ D + +QETKT D FP + + Sbjct: 1 MSRLRLASWNVNSLKVRLPQVLDWLESAKIDALVMQETKTTDDVFPQAAFAEAGFDVFFL 60 Query: 61 GQKSYNGVAILSKYQPIEIV------THLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 GQK+YNGVA+ S+ ++ P + + +R Y P Sbjct: 61 GQKTYNGVALCSRQTTVKTSDVVLGLPGWPDPQKRFISALLSPLAAPEQPPIRFCGGYFP 120 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 +G + S+KY K+ WI R L L+ GD+NI P D +NP W Sbjct: 121 NGQAVGSSKYLYKLDWIAVLERTLKTYLADTPRLVLGGDFNIAPADADVWNPEAWRGKIL 180 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 + R++ ++L +G D+ R +S+WDY + +N G+RID +++S Sbjct: 181 CSEPERKALERLFALGLYDSFRLFTQPAERFSWWDYRQSGFERNHGLRIDLLLVSEALKG 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + SA ID PRG +PSDH PV++ L + Sbjct: 241 AVESASIDDGPRGNPQPSDHAPVMLDLSL 269 >gi|116668987|ref|YP_829920.1| exodeoxyribonuclease III [Arthrobacter sp. FB24] gi|116609096|gb|ABK01820.1| Exodeoxyribonuclease III [Arthrobacter sp. FB24] Length = 294 Score = 203 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 78/267 (29%), Positives = 131/267 (49%), Gaps = 8/267 (2%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 V +ATWNVNS+RAR + AW++ ++ D++ +QETK +D NFP+E + + Y + G Sbjct: 26 TVKIATWNVNSLRARADRVEAWLERSDCDVLAIQETKCKDDNFPWELFERMGYEVAHFGV 85 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQA----RFIEATFTINTQTLRIGNLYLPHGNP 118 +NGVAI+S+ ++ + + +R+ +LY+P+G Sbjct: 86 SQWNGVAIVSRVGLEDVERSFVDQPVFGKNGKDAIQEARAIGATCGGVRVWSLYVPNGRA 145 Query: 119 ITSTKYDDKISWIKRFLRFASQRL--ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + K+SW+ A + E + GD+NI PQ D ++ + +A Sbjct: 146 LDDEHMPYKLSWLDMLKTHAQAWVTENPEAQIALMGDWNIAPQDDDVWDIDFFRANAMTH 205 Query: 177 --LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 R +F+ ++ GF D +R +Y++WDY + K +G+RID ++ SP + Sbjct: 206 VSEPERAAFRAFEDAGFQDVVRPHTPGPGVYTYWDYTQLRFPKKEGMRIDFVLASPALAA 265 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261 + A ID + R SDH PVIV L Sbjct: 266 RVTGASIDREERKGKGASDHAPVIVEL 292 >gi|238910880|ref|ZP_04654717.1| exonuclease III [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] Length = 268 Score = 203 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 77/268 (28%), Positives = 122/268 (45%), Gaps = 8/268 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A ++++ PD+I LQETK D+ FP E + L Y++ GQK Sbjct: 1 MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDEMFPLEEVAKLGYNVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122 + GVA+L+K PI + P D + Q R I A + + N Y P G Sbjct: 61 GHYGVALLTKATPISVRRGFPDDGEEAQRRIIMAEIPSPLGNITVINGYFPQGESRDHPL 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + + + L+ + P++ GD NI P + + F Sbjct: 121 KFPAKAQFYQNLQNYLETELKRDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +L G D R + +S++DY + + N+G+RID ++ S Sbjct: 181 PEEREWMSRLLKWGLVDTFRQANPQTMDKFSWFDYRSKGFVDNRGLRIDLLLASAPLAER 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 ID R KPSDH PV + + Sbjct: 241 CAETGIDYDIRSMEKPSDHAPVWATFRV 268 >gi|239999627|ref|ZP_04719551.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae 35/02] gi|240017251|ref|ZP_04723791.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae FA6140] gi|240081112|ref|ZP_04725655.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae FA19] gi|240118615|ref|ZP_04732677.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae PID1] gi|240124158|ref|ZP_04737114.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae PID332] gi|240126225|ref|ZP_04739111.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae SK-92-679] gi|240128828|ref|ZP_04741489.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae SK-93-1035] gi|254494342|ref|ZP_05107513.1| exodeoxyribonuclease III [Neisseria gonorrhoeae 1291] gi|268595439|ref|ZP_06129606.1| exodeoxyribonuclease III [Neisseria gonorrhoeae 35/02] gi|268597223|ref|ZP_06131390.1| exodeoxyribonuclease III [Neisseria gonorrhoeae FA19] gi|268604327|ref|ZP_06138494.1| exodeoxyribonuclease III [Neisseria gonorrhoeae PID1] gi|268682783|ref|ZP_06149645.1| exodeoxyribonuclease III [Neisseria gonorrhoeae PID332] gi|268684808|ref|ZP_06151670.1| exodeoxyribonuclease III [Neisseria gonorrhoeae SK-92-679] gi|268687210|ref|ZP_06154072.1| exodeoxyribonuclease III [Neisseria gonorrhoeae SK-93-1035] gi|293398467|ref|ZP_06642645.1| exodeoxyribonuclease III [Neisseria gonorrhoeae F62] gi|226513382|gb|EEH62727.1| exodeoxyribonuclease III [Neisseria gonorrhoeae 1291] gi|268548828|gb|EEZ44246.1| exodeoxyribonuclease III [Neisseria gonorrhoeae 35/02] gi|268551011|gb|EEZ46030.1| exodeoxyribonuclease III [Neisseria gonorrhoeae FA19] gi|268588458|gb|EEZ53134.1| exodeoxyribonuclease III [Neisseria gonorrhoeae PID1] gi|268623067|gb|EEZ55467.1| exodeoxyribonuclease III [Neisseria gonorrhoeae PID332] gi|268625092|gb|EEZ57492.1| exodeoxyribonuclease III [Neisseria gonorrhoeae SK-92-679] gi|268627494|gb|EEZ59894.1| exodeoxyribonuclease III [Neisseria gonorrhoeae SK-93-1035] gi|291610938|gb|EFF40035.1| exodeoxyribonuclease III [Neisseria gonorrhoeae F62] gi|317164881|gb|ADV08422.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae TCDC-NG08107] Length = 256 Score = 203 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 91/260 (35%), Positives = 136/260 (52%), Gaps = 4/260 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + TWNVNS+ R+ + + +N PDI+ LQE K + FP LQ + +H GQK Sbjct: 1 MKITTWNVNSLNVRLPQVQNLLADNPPDILVLQELKLDQDKFPAAALQMMGWHCVWSGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAI+S+ P ++ LP D Q R I AT +R+ N+Y +G + S K Sbjct: 61 TYNGVAIISRSVPQDVHFGLPSLPDDPQRRVIAATVGG----VRVINVYCVNGEALDSPK 116 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K W F + L+ GD+NI P DCY+P W + RQ F Sbjct: 117 FKYKEQWFAALTEFVRDEMTRHGKLVLLGDFNIAPADADCYDPEKWYEKIHCSSVERQWF 176 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q L ++G TD++R H Y+++DY + + G+RIDHI+++ E ++L RID Sbjct: 177 QNLLDLGLTDSLRQVHPEGAFYTWFDYRGAMFQRKLGLRIDHILVTSEMAAVLKDVRIDL 236 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 + R +PSDH PV D+ Sbjct: 237 ETRALERPSDHAPVAAEFDL 256 >gi|33239934|ref|NP_874876.1| exonuclease III [Prochlorococcus marinus subsp. marinus str. CCMP1375] gi|33237460|gb|AAP99528.1| Exonuclease III [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length = 276 Score = 203 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 95/274 (34%), Positives = 151/274 (55%), Gaps = 5/274 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ATWNVNSIR R+ + ++ E PD++CLQETK EDK FP E+++ Y + GQK Sbjct: 1 MLFATWNVNSIRTRLSQVEEFLDETQPDLLCLQETKVEDKLFPRESIEKRGYQVSFYGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT----QTLRIGNLYLPHGNPI 119 +YNGVA++S + +I + G+ ++ Q +R+ N+Y+P+G+ + Sbjct: 61 AYNGVALISNQKLDDIRLGISGELVNNQVSTFLDEQKRIISALINGIRVVNVYVPNGSSL 120 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 S KY K+ W+ ++ + E EPL GD+NI+ + D +NP + N +L Sbjct: 121 DSEKYIYKLKWLDHLKKYFESQEERSEPLCLMGDFNIVLEEKDIHNPKRFNNGIMASLSE 180 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R++ Q + D R +S+WDY + +W K++G RIDHI LS E + S Sbjct: 181 REALQNVLGTRLEDVFRLFEADTGHWSWWDYRSGAWQKDQGWRIDHIYLSEELINNARSC 240 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDS 273 I K RG +PSDH PV+V ++ P P++ ++S Sbjct: 241 VIHKKARGNIQPSDHAPVLVDINWP-PQEDNENS 273 >gi|255530789|ref|YP_003091161.1| exodeoxyribonuclease III Xth [Pedobacter heparinus DSM 2366] gi|255343773|gb|ACU03099.1| exodeoxyribonuclease III Xth [Pedobacter heparinus DSM 2366] Length = 264 Score = 203 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 99/267 (37%), Positives = 144/267 (53%), Gaps = 5/267 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A++N+N I AR+ NL W+KE PD++CLQE K D FP + L YH GQK Sbjct: 1 MKIASYNINGINARLDNLLRWLKEARPDVVCLQELKAPDNRFPAQLLLDAGYHAIWHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 S+NGVAILS+Y I+ + IG LYLP+GNP K Sbjct: 61 SWNGVAILSRYAEIKETRRGL---EGDPEDLHSRYIEAFINGVVIGCLYLPNGNPFPGPK 117 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 ++ K++WIKR + A++ P+ GDYNIIP D Y P + +A F E R+ + Sbjct: 118 FEYKLNWIKRLTKHAAKLNAFGLPVALVGDYNIIPTDLDTYKPEKYLENALFRPEARKLW 177 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 L G+TDA R + +Y+FWDY +++ ++ G+R+DH +L+ + L +A +D Sbjct: 178 TALLKQGWTDAFRKLYPKDRIYTFWDYLRNAYHRDAGLRLDHFLLNDKLVDRLDAAGVDK 237 Query: 244 KPRGWTKPSDHTPVIVSLD--IPEPRK 268 RGW SDH PV V L +P+ K Sbjct: 238 HVRGWDHSSDHAPVWVVLKDHLPDQAK 264 >gi|30062986|ref|NP_837157.1| exonuclease III [Shigella flexneri 2a str. 2457T] gi|30041235|gb|AAP16964.1| exonuclease III [Shigella flexneri 2a str. 2457T] gi|281600889|gb|ADA73873.1| Exonuclease III [Shigella flexneri 2002017] gi|313649224|gb|EFS13658.1| exodeoxyribonuclease III [Shigella flexneri 2a str. 2457T] Length = 268 Score = 203 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 78/266 (29%), Positives = 123/266 (46%), Gaps = 8/266 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A ++++ PD+I LQETK D FP E + L Y++ GQK Sbjct: 1 MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 + GVA+L+K PI + PGDD + Q R I A + + N Y P G Sbjct: 61 GHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSLLGNVTVINGYFPQGESRDHPI 120 Query: 124 -YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 + K + + + L+ + P++ GD NI P + + F Sbjct: 121 KFPAKAQFYQNLQNYLETELKRDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +L + G D R + +S++DY + + N+G+RID ++ S Sbjct: 181 PEEREWMDRLMSWGVVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAEC 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 ID + R KPSDH PV + Sbjct: 241 CVETGIDYEIRSMEKPSDHAPVWATF 266 >gi|325267794|ref|ZP_08134444.1| exodeoxyribonuclease III [Kingella denitrificans ATCC 33394] gi|324980675|gb|EGC16337.1| exodeoxyribonuclease III [Kingella denitrificans ATCC 33394] Length = 258 Score = 203 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 91/259 (35%), Positives = 136/259 (52%), Gaps = 4/259 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + TWNVNS+ R+ ++ W+ ++ PDI+ LQE K E FP L + + GQK Sbjct: 1 MKICTWNVNSLNVRLPHVTDWLAQHQPDILVLQELKLEHDKFPVAALNMMGWQCAWSGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAI+S++ ++ T LP D Q R I AT +R+ N+Y +G + S K Sbjct: 61 TYNGVAIISRHAIKDVHTGLPALPDDPQQRVIAATVNG----VRVVNVYCVNGESLDSEK 116 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K W F Q+++ L+ GD+NI P D Y+P W + E R F Sbjct: 117 FAYKRQWFAALTDFIRQQMQQYPKLVLLGDFNIAPTDDDVYDPEKWREHIHCSSEERAWF 176 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q L ++G TD +R H T Y++WDY + + G+RIDHI+ + +L +IDT Sbjct: 177 QALLDLGLTDCLRHVHPTGAHYTWWDYRGAMFQRKLGLRIDHILATAALRDVLRDVQIDT 236 Query: 244 KPRGWTKPSDHTPVIVSLD 262 + R +PSDH PV D Sbjct: 237 EARAKERPSDHAPVFALFD 255 >gi|259908294|ref|YP_002648650.1| Exodeoxyribonuclease III [Erwinia pyrifoliae Ep1/96] gi|224963916|emb|CAX55420.1| Exodeoxyribonuclease III [Erwinia pyrifoliae Ep1/96] Length = 268 Score = 203 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 81/266 (30%), Positives = 122/266 (45%), Gaps = 8/266 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A ++++ PD+I LQETK D FP E + SL YH+ GQK Sbjct: 1 MKFVSFNINGLRARPHQLQAIVEQHQPDVIGLQETKVHDDMFPLEEVASLGYHVFCHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122 + GVA+L K QP+ + GD+ D Q R I A L + N Y P G Sbjct: 61 GHYGVALLCKQQPVAVRRGFAGDNEDAQRRIIMADILTPAGPLTVINGYFPQGESRDHPT 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + + + Q+ + + L+ GD NI + + F Sbjct: 121 KFPAKEKFYRDLQSYLEQQQKADNQLLIMGDMNISSSDLDIGIGEESRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ L N G D R + + +S++DY + + N+G+RID I+ S Sbjct: 181 PEEREWMSTLMNWGLYDTWRTQNATVNDRFSWFDYRSKGFDDNRGLRIDLILASRPLADR 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 + ID R KPSDH P+ Sbjct: 241 CVATGIDYDIRAMEKPSDHAPIWAEF 266 >gi|161486214|ref|NP_754044.2| exonuclease III [Escherichia coli CFT073] Length = 268 Score = 203 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 79/266 (29%), Positives = 124/266 (46%), Gaps = 8/266 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A ++++ PD+I LQETK D FP E + L Y++ GQK Sbjct: 1 MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 + GVA+L+K PI + PGDD + Q R I A + + N Y P G Sbjct: 61 GHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSPLGNVTVINGYFPQGESRDHPI 120 Query: 124 -YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 + K + + + L+ E P++ GD NI P + + F Sbjct: 121 KFSAKAQFYQNLQNYLETELKRENPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ ++L + G D R + +S++DY + + N+G+RID ++ S Sbjct: 181 PEEREWMERLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAEC 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 ID + R KPSDH PV + Sbjct: 241 CVETGIDYEIRSMEKPSDHAPVWATF 266 >gi|190891414|ref|YP_001977956.1| exodeoxyribonuclease III protein [Rhizobium etli CIAT 652] gi|218516597|ref|ZP_03513437.1| exodeoxyribonuclease III protein [Rhizobium etli 8C-3] gi|190696693|gb|ACE90778.1| exodeoxyribonuclease III protein [Rhizobium etli CIAT 652] Length = 263 Score = 203 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 116/262 (44%), Positives = 162/262 (61%), Gaps = 5/262 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+NVN I R+ L W+KE+ PD++CLQE KT+D FP + Y GQ+ Sbjct: 1 MKIATYNVNGINGRLDILLRWLKEDAPDVVCLQELKTDDAKFPRTETERAGYGAVWHGQR 60 Query: 64 SYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 S+NGVAIL+K PI LPGD D +R+IEA IG LYLP+GNP S Sbjct: 61 SWNGVAILAKGKTPILTRRGLPGDPDDTHSRYIEAAVDGM----LIGCLYLPNGNPFPSA 116 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K++ K+ W +R +A++ LE+E P I AGD+N++P D Y P W +DA F EVR + Sbjct: 117 KFEYKLRWFRRLSAYAAELLEIEVPSILAGDFNVMPTEIDVYKPERWLDDALFRPEVRNA 176 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 + +L G+TDA+R H +Y+FW Y+ +S+ ++ G+RIDH++LSP L SA + Sbjct: 177 YAQLVAQGWTDAVRHLHPGERIYTFWKYWRNSFERDAGLRIDHLLLSPTVAPWLRSASVR 236 Query: 243 TKPRGWTKPSDHTPVIVSLDIP 264 KPRGW SDH PV++ LDIP Sbjct: 237 RKPRGWEHTSDHAPVVIELDIP 258 >gi|160872135|ref|ZP_02062267.1| exodeoxyribonuclease III [Rickettsiella grylli] gi|159120934|gb|EDP46272.1| exodeoxyribonuclease III [Rickettsiella grylli] Length = 261 Score = 203 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 90/260 (34%), Positives = 144/260 (55%), Gaps = 5/260 (1%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + +ATWN+NS+R R+ ++ W+ + P ++ LQETK ++ +FP E + YH+ G Sbjct: 3 RLFKIATWNINSLRIRLAHVLTWLNTHQPHLLALQETKVQNHHFPEEPFKRAGYHVLYNG 62 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 QK+YNGVA +S+ VT L + +LRI N+Y+P+G+ + S Sbjct: 63 QKTYNGVAFISRIPMQNEVT-----CLPHFDDTQRRILVVTIGSLRIVNIYVPNGSHLGS 117 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 K+ K+ W+K+ + L L LI GD+NI P+ +D ++P IW+ + + R+ Sbjct: 118 EKFLYKLKWLKQLKIYLQHELSLHPSLIVLGDFNIAPKDNDVHDPQIWQGKVLVSPQERK 177 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 + Q + +G D+ R H+ H Y++WDY A ++ +N G+RIDHI+ S S I Sbjct: 178 ALQDIVALGLKDSFRLFHNEPHQYTWWDYRAGAFRRNHGLRIDHILSSTHLISQCIDCEI 237 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 D + R W KPSDH PVI + Sbjct: 238 DKEIRRWEKPSDHVPVIATY 257 >gi|254247764|ref|ZP_04941085.1| Exonuclease III [Burkholderia cenocepacia PC184] gi|124872540|gb|EAY64256.1| Exonuclease III [Burkholderia cenocepacia PC184] Length = 258 Score = 203 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 84/256 (32%), Positives = 133/256 (51%), Gaps = 1/256 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ R ++ W+ ++ D++CLQE K D+ FP L+++ Y GQK Sbjct: 1 MKIATWNVNSLNVRKQHVLDWLAQSGTDVLCLQELKLPDEKFPRADLEAVGYRSWFTGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAIL + + + ++ + +RI + Y P+G + S K Sbjct: 61 TYNGVAILVRDT-LAVDESDVVRNIPGFDDPQQRVIAATVDGVRIVSAYFPNGQALDSDK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W+ + L+ L GDYNI P+ D ++P WE + + R F Sbjct: 120 FVYKMQWLDALQAWLRTELQRYPKLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +L +GF DA R +++WDY ++ +N G+RIDHI+LSP + S +D Sbjct: 180 AQLIELGFVDAFRRFEQPEKTFTWWDYRMMAFRRNAGLRIDHILLSPALAATCASCEVDR 239 Query: 244 KPRGWTKPSDHTPVIV 259 PR W +PSDHTPV+ Sbjct: 240 TPRTWEQPSDHTPVVA 255 >gi|153837336|ref|ZP_01990003.1| exodeoxyribonuclease III [Vibrio parahaemolyticus AQ3810] gi|260903451|ref|ZP_05911846.1| exodeoxyribonuclease III [Vibrio parahaemolyticus AQ4037] gi|149749367|gb|EDM60140.1| exodeoxyribonuclease III [Vibrio parahaemolyticus AQ3810] gi|308110362|gb|EFO47902.1| exodeoxyribonuclease III [Vibrio parahaemolyticus AQ4037] Length = 268 Score = 203 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 81/268 (30%), Positives = 133/268 (49%), Gaps = 9/268 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V ++N+N +RAR+H L A I ++ PD+I LQE K D+ FP E ++++ Y + GQK Sbjct: 1 MKVISFNINGLRARLHQLQALIDKHQPDVIGLQEIKVHDEAFPIEDVEAMGYKVYFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121 ++ GVA+L K +PI + P ++ + + N + + + N Y P G+ I+ Sbjct: 61 AHYGVAMLCKQEPIRVQKGFPTDNEEHQKRMIMATFENENGEKVTVLNGYFPQGDNISHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175 TK+ K + K + + + +E LI GD NI P + F Sbjct: 121 TKFPYKRQFYKDLMTYLNDHHSNDEQLIVMGDINISPIDSDIGIGEPNRKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R+ Q L N GF D R + + +S++DY + + N+G+RID I+ +P Sbjct: 181 QPEEREWLQTLLNWGFEDTFRKLYPEVNDRFSWFDYRSRGFDDNRGLRIDVILATPSLAQ 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + ID + RG KPSDH P+ + Sbjct: 241 KCIESGIDYELRGIEKPSDHAPIWSTFK 268 >gi|113969789|ref|YP_733582.1| exonuclease III [Shewanella sp. MR-4] gi|113884473|gb|ABI38525.1| Exodeoxyribonuclease III [Shewanella sp. MR-4] Length = 270 Score = 203 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 86/268 (32%), Positives = 130/268 (48%), Gaps = 9/268 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +R+R+H L A I + PDII LQETK D+ FP ++++ YH+ G K Sbjct: 1 MKIVSFNINGLRSRLHQLQALIDSHQPDIIGLQETKVHDEAFPLAEVEAMGYHVHYHGGK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122 ++ GVA+LSK PI++ D D Q R I TF N + L + N Y P G I Sbjct: 61 AHYGVAMLSKVAPIKVQKGFATDGEDAQRRMIIGTFAQANGRPLTVLNGYFPQGESIDHP 120 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175 KY K + + + +E + GD NI P D + F Sbjct: 121 TKYPAKRKFYQDLMAHLHANHSNDEDIAIIGDINISPIDLDIGIGEVNRKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R+ + LQ+ G D R H YS++DY + + N+G+RID I+ +P + Sbjct: 181 QPEEREWLKTLQDWGLVDTFRQLHPDRSERYSWFDYRSKGFDDNRGLRIDVILATPSLAA 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 L + +D RG KPSDH P+ + Sbjct: 241 RLVESDVDYDLRGIDKPSDHAPIWSTFK 268 >gi|148977573|ref|ZP_01814152.1| exonuclease III [Vibrionales bacterium SWAT-3] gi|145963224|gb|EDK28491.1| exonuclease III [Vibrionales bacterium SWAT-3] Length = 268 Score = 203 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 79/268 (29%), Positives = 130/268 (48%), Gaps = 9/268 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V ++N+N +RAR+H L A I ++ PD+I LQE K D+ FP ++++ Y + GQK Sbjct: 1 MKVISFNINGLRARLHQLQAVIDKHQPDVIGLQEIKVHDEAFPIADVEAMGYKVYFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121 ++ GVA+L K +PI + P ++ + + N + + + N Y P G+ I Sbjct: 61 AHYGVAMLCKQEPISVQKGFPTDNEDHQKRMIMATFEDENGEKVTVLNGYFPQGDNIKHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175 TKY K + K + + + +E +I GD NI P + F Sbjct: 121 TKYPYKREFYKDLMTYLNDYHNNDEQIIVMGDINISPIDADIGIGEPNAKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R+ + L + GF D R H YS++DY + + N+G+RID ++ + + Sbjct: 181 QPEEREWLKALMDWGFVDTFRQLHPEVTDQYSWFDYRSKGFLDNRGLRIDVVLATQKLAD 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 A ID + RG KPSDH P+ + Sbjct: 241 KCTEAGIDYELRGIEKPSDHAPIWSTFK 268 >gi|159029855|emb|CAO90909.1| xthA [Microcystis aeruginosa PCC 7806] Length = 262 Score = 203 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 93/262 (35%), Positives = 149/262 (56%), Gaps = 4/262 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSIR+R + W++ N +++CLQETK D++FP E +SL YH+ GQK Sbjct: 1 MKIATWNVNSIRSRQDQVINWLQLNPVEVLCLQETKVIDRDFPREAFESLGYHLYISGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHL---PGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +YNGVAI S+ +I G++L + + T +RI NLY+P+G+ + Sbjct: 61 AYNGVAIFSQKPLDDITVGFSPIIGENLTGELDEQKRLITGVIGDIRIINLYVPNGSSLD 120 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPL-IFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 S KY K+ W++ ++ + + + GD+NI + D Y+P EN + + Sbjct: 121 SDKYIYKLKWLETLRKYLDKIINSQPQELCICGDFNIALEDKDIYDPKGKENHIMSSAKE 180 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R++ +K+ +G DA R YS+WDY + +++N+G RIDH+ L+P+ + Sbjct: 181 REALEKVLEIGLQDAFRKFTSAAGHYSWWDYRSGGFARNRGWRIDHLYLTPQLYEKAVNC 240 Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261 ID +PR KPSDHTPVI+ + Sbjct: 241 LIDREPRKQEKPSDHTPVILEI 262 >gi|152969774|ref|YP_001334883.1| exonuclease III [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|330012539|ref|ZP_08307413.1| exodeoxyribonuclease III [Klebsiella sp. MS 92-3] gi|150954623|gb|ABR76653.1| exonuclease III [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|328533786|gb|EGF60471.1| exodeoxyribonuclease III [Klebsiella sp. MS 92-3] Length = 268 Score = 203 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 82/266 (30%), Positives = 126/266 (47%), Gaps = 8/266 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H LAA ++++ PD+I LQETK D FP E + L Y++ GQK Sbjct: 1 MKFVSFNINGLRARPHQLAAIVEKHQPDVIGLQETKVHDDMFPLEEVARLGYNVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122 + GVA+L+K PI + P D + Q R I A + + N Y P G T Sbjct: 61 GHYGVALLTKETPIAVRRGFPDDGEEAQRRIIMAEIPSPFGNVTVINGYFPQGESRDHET 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K ++ + + L E P++ GD NI P + + F Sbjct: 121 KFPAKAAFYQNLQNYLETELNKENPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHH-LYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +L G D R + +H +S++DY + + N+G+RID ++ S Sbjct: 181 PEEREWMDRLLGWGLVDTWRQANPDNHEHFSWFDYRSKGFDDNRGLRIDLLLASQPLAQR 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 ID + RG KPSDH PV + Sbjct: 241 CVETGIDYEIRGMEKPSDHAPVWATF 266 >gi|262404202|ref|ZP_06080757.1| exodeoxyribonuclease III [Vibrio sp. RC586] gi|262349234|gb|EEY98372.1| exodeoxyribonuclease III [Vibrio sp. RC586] Length = 268 Score = 203 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 79/268 (29%), Positives = 127/268 (47%), Gaps = 9/268 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V ++N+N +RAR+H L A I ++ PD+I LQE K D FP + ++++ Y + GQK Sbjct: 1 MKVISFNINGLRARLHQLQALIDKHQPDVIGLQEIKVHDDAFPRQEVEAMGYQVYFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGD-DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121 ++ GVAIL K P+E++ P D + + + + I N Y P G+ + Sbjct: 61 AHYGVAILCKQTPVEVIKGFPTDSEEHQKRMIMATFVDQDGNKTTILNGYFPQGDNVEHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175 TK+ K + + + + + E L+ GD NI P + F Sbjct: 121 TKFPYKRQFYRDLMTYLGEHRSNAERLVVMGDINISPLDLDIGIGEANRKRWLQTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R+ Q L + G D R H +S++DY + + N+G+RID I+ +P Sbjct: 181 QPEEREWLQSLMDWGLVDTFRQLHPEVSDQFSWFDYRSRGFDDNRGLRIDVILATPTLAE 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 A ID + RG KPSDH P+ + Sbjct: 241 TCQEAGIDYELRGIDKPSDHAPIWATFK 268 >gi|86146435|ref|ZP_01064758.1| exodeoxyribonuclease III [Vibrio sp. MED222] gi|85835698|gb|EAQ53833.1| exodeoxyribonuclease III [Vibrio sp. MED222] Length = 268 Score = 203 bits (515), Expect = 3e-50, Method: Composition-based stats. Identities = 79/268 (29%), Positives = 132/268 (49%), Gaps = 9/268 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V ++N+N +RAR+H L A I ++ PD+I LQE K D+ FP ++++ Y + GQK Sbjct: 1 MKVISFNINGLRARLHQLQAIIDKHQPDVIGLQEIKVHDEAFPLADVEAMGYKVYFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121 ++ GVA+L K +PI + P ++ + + N + + + N Y P G+ I Sbjct: 61 AHYGVAMLCKQEPISVQKGFPTDNEDHQKRMIMATFEDDNGEKITVLNGYFPQGDNIKHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175 TKY K + K + + + +E +I GD NI P + F Sbjct: 121 TKYPYKREFYKDLMTYLNDYHNKDEQVIVMGDINISPTDIDIGIGEPNAKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R+ + L + GF D+ R H + YS++DY + + N+G+RID ++ + + Sbjct: 181 QPEEREWLKTLMDWGFVDSFRLLHPEVNDQYSWFDYRSKGFVDNRGLRIDVVLATQKLAD 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 A ID + RG KPSDH P+ + Sbjct: 241 KCTEAGIDYELRGIEKPSDHAPIWSTFK 268 >gi|294012654|ref|YP_003546114.1| exodeoxyribonuclease III [Sphingobium japonicum UT26S] gi|292675984|dbj|BAI97502.1| exodeoxyribonuclease III [Sphingobium japonicum UT26S] Length = 256 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 104/259 (40%), Positives = 152/259 (58%), Gaps = 5/259 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+N+N I+AR+ L W+ E PDI CLQE KT D FP ++ + Y GQK Sbjct: 1 MRIATFNINGIKARLPRLLEWLDETRPDIACLQEIKTSDDTFPVRDIEDVGYGAIWHGQK 60 Query: 64 SYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 +NGVAIL++ P+E+ L G+ D +R++EA LR+ ++YLP+GNP Sbjct: 61 GFNGVAILARGETPVEVRRGLEGEPEDEHSRYLEADVKG----LRVASIYLPNGNPQPGP 116 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K+D K+ W+KR A+Q E P I AGDYN+IP+ D Y+ DA E R + Sbjct: 117 KFDYKLRWMKRLRDRAAQIWAEEVPAILAGDYNVIPRDRDVYSVKAMAEDALMQPESRAA 176 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 +++L G+TDAI + H ++++WDY ++W ++ G RIDH++LSP A L A++D Sbjct: 177 YRRLLGDGWTDAIASRHPAGRVWTYWDYQMNAWPRDAGFRIDHLLLSPAAADRLIDAQVD 236 Query: 243 TKPRGWTKPSDHTPVIVSL 261 RG K SDH P V L Sbjct: 237 KDFRGREKASDHAPTWVEL 255 >gi|255326144|ref|ZP_05367231.1| exodeoxyribonuclease III [Rothia mucilaginosa ATCC 25296] gi|255296855|gb|EET76185.1| exodeoxyribonuclease III [Rothia mucilaginosa ATCC 25296] Length = 288 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 71/264 (26%), Positives = 124/264 (46%), Gaps = 6/264 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+NSIRAR + + W+ E++ D++ LQETKT+D+ FPF+ + + Y + G Sbjct: 23 MKIATWNINSIRARENRVEDWLDEHDVDVLALQETKTKDETFPFDLFEFMGYEVAHFGLN 82 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIE----ATFTINTQTLRIGNLYLPHGNPI 119 +NGVAI S+ ++ + E +R+ +LY+P+G + Sbjct: 83 QWNGVAIASRVGLEDVQRGFDNQPHFGKTGEPEVLEARAIGATCGGVRVWSLYVPNGRGL 142 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL 177 T D K+ W++ + L GD+N+ P+ D ++ + + + Sbjct: 143 TDPHMDYKLRWMEALRQNVHNELADNPQSQLALVGDWNVAPEDADVWDIDYFLRNEMTHV 202 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 + + T Y++WDY A ++K++G+RID + SP + + Sbjct: 203 SAPERRAFAALLEEGMVDVVRPHTPGEYTYWDYQAGRFTKDEGMRIDFQLFSPALAARVE 262 Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261 A ID R SDHTPV+V + Sbjct: 263 RAWIDKVERAGEGASDHTPVVVEI 286 >gi|82776806|ref|YP_403155.1| exonuclease III [Shigella dysenteriae Sd197] gi|309788829|ref|ZP_07683424.1| exodeoxyribonuclease III [Shigella dysenteriae 1617] gi|81240954|gb|ABB61664.1| exonuclease III [Shigella dysenteriae Sd197] gi|308923100|gb|EFP68612.1| exodeoxyribonuclease III [Shigella dysenteriae 1617] Length = 268 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 77/266 (28%), Positives = 122/266 (45%), Gaps = 8/266 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A + ++ PD+I LQETK D FP E + L Y++ GQK Sbjct: 1 MKFVSFNINGLRARPHQLEAIVDKHQPDVIGLQETKVHDDMFPLEDVAKLGYNVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 + GVA+L+K PI + PGD + Q R I A + + N Y P G Sbjct: 61 GHYGVALLTKETPIAVRRGFPGDGEEAQRRIIMAEIPSPLGNVTVINGYFPQGERRDHPI 120 Query: 124 -YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 + K + + + L+ + P++ GD NI P + + F Sbjct: 121 KFPAKAQFYQNLQNYLETELKRDNPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ ++L + G D R + +S++DY + + N+G+RID ++ S Sbjct: 181 PEEREWMERLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAEC 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 ID + R KPSDH PV + Sbjct: 241 CVETGIDYEIRSMEKPSDHAPVWATF 266 >gi|260642288|ref|ZP_05415267.2| exodeoxyribonuclease III [Bacteroides finegoldii DSM 17565] gi|260622802|gb|EEX45673.1| exodeoxyribonuclease III [Bacteroides finegoldii DSM 17565] Length = 255 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 83/263 (31%), Positives = 140/263 (53%), Gaps = 12/263 (4%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59 ++ + T+NVN +RA + W+ + NPDI+CLQETK + +P E ++L Y ++ + Sbjct: 1 MMKIITYNVNGLRAAVSKGFPEWLAQENPDILCLQETKLQPDQYPAEVFEALGYKSYLYS 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GVAIL+K +P + + + D + RFI A F L + ++Y P G Sbjct: 61 AQKKGYSGVAILTKQEPDHVEYGMGIEAYDNEGRFIRADFG----DLSVVSVYHPSG-TS 115 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K+ W++ F ++ ++ + LI GDYNI +P D ++P+ ++ F E Sbjct: 116 GDERQAFKMVWLEDFQKYVTELRKTRPNLILCGDYNICHEPIDIHDPVRNAKNSGFLPEE 175 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R+ + + GF D+ R + Y++W Y +S +KNKG RID+ M S L SA Sbjct: 176 REWMTRFLSAGFIDSFRLLYPEKQEYTWWSYRFNSRAKNKGWRIDYCMTSEPVRRWLKSA 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 RI + SDH P+++ +D Sbjct: 236 RILNEA----VHSDHCPMVLEID 254 >gi|312881205|ref|ZP_07741003.1| exonuclease III [Vibrio caribbenthicus ATCC BAA-2122] gi|309371097|gb|EFP98551.1| exonuclease III [Vibrio caribbenthicus ATCC BAA-2122] Length = 268 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 85/268 (31%), Positives = 134/268 (50%), Gaps = 9/268 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V ++N+N +RAR+H L A I ++ PD+I LQE K D+ FP E ++++ Y + GQK Sbjct: 1 MKVISFNINGLRARLHQLQAVIDKHQPDVIGLQEIKVHDEAFPLEDVEAMGYKVYFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITS- 121 ++ GVA+L K +PI + P D+ D Q R I T N + + + N Y P G+ I Sbjct: 61 AHYGVAMLCKKEPISVQKGFPTDNDDHQKRMIMVTMEDDNGEKVTVLNGYFPQGDNIEHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175 TKY K + K + + + +E LI GD NI P + F Sbjct: 121 TKYPYKRQFYKDLMTYLNDHHTNDEQLIVMGDINISPIDADIGIGEPNRKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R+ + L + G D R H +S++DY + + N+G+RID ++ +P+ Sbjct: 181 QPEEREWLKTLLDWGLVDTFRQIHPEVEDRFSWFDYRSRGFDDNRGLRIDVVLATPKLAE 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + ID + RG KPSDH P+ + Sbjct: 241 KCTESDIDYELRGIEKPSDHAPIWSTFK 268 >gi|170749328|ref|YP_001755588.1| exodeoxyribonuclease III Xth [Methylobacterium radiotolerans JCM 2831] gi|170655850|gb|ACB24905.1| exodeoxyribonuclease III Xth [Methylobacterium radiotolerans JCM 2831] Length = 264 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 112/261 (42%), Positives = 165/261 (63%), Gaps = 3/261 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + TWNVNSI+ R+ +L +++E PD++CLQE K +D++FP +++ Y +ET GQK Sbjct: 1 MRITTWNVNSIKQRLPHLLGFLEEARPDVVCLQELKCQDESFPRADIEAAGYAVETLGQK 60 Query: 64 SYNGV--AILSKYQPIEIVTHLPGDDLDVQARFIEATFTI-NTQTLRIGNLYLPHGNPIT 120 +YNGV + + +I LPGD D QAR+IEA + +T+ +R+ ++YLP+GNP+ Sbjct: 61 AYNGVALLVRAPLAMSKIRRGLPGDADDAQARYIEALISGADTRPVRVASIYLPNGNPVD 120 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 S KY K+++++R A LE E ++ AGDYN+IP+ D +P W +DA F R Sbjct: 121 SPKYPYKLAFLERLRLHARALLEDEIAVVLAGDYNVIPEAADAADPEAWRSDALFLGTTR 180 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 +F+ + G+TDA+RA LY+FWDY A W +N GIRIDH++LSP+A L SA Sbjct: 181 AAFRAILAEGYTDALRACDPRDGLYTFWDYQAGCWQRNAGIRIDHLLLSPQAGDRLVSAS 240 Query: 241 IDTKPRGWTKPSDHTPVIVSL 261 + RG KPSDH PV L Sbjct: 241 VQKHLRGLDKPSDHVPVTAEL 261 >gi|254506149|ref|ZP_05118293.1| exodeoxyribonuclease III [Vibrio parahaemolyticus 16] gi|219550967|gb|EED27948.1| exodeoxyribonuclease III [Vibrio parahaemolyticus 16] Length = 268 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 88/268 (32%), Positives = 137/268 (51%), Gaps = 9/268 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V ++N+N +RAR+H L A I ++ PD+I LQE K D+ FP E ++++ Y + GQK Sbjct: 1 MKVISFNINGLRARLHQLQAVIDKHQPDVIGLQEIKVHDEAFPLEDVEAMGYKVYFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT-FTINTQTLRIGNLYLPHGNPITS- 121 ++ GVA+L K +PI I P D+ + Q R I T N + + + N Y P G+ I Sbjct: 61 AHYGVAMLCKKEPISIQKGFPTDNDEHQKRMIMVTLEDDNGEKVTVLNGYFPQGDNIGHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175 TK+ K + K + + + +E LI GD NI P + F Sbjct: 121 TKFPYKRQFYKDLMTYLNDHHNNDEQLIVMGDINISPIDADIGIGEPNRKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E RQ Q L + GF D R H + +S++DY + + N+G+RID ++ +P+ + Sbjct: 181 QPEERQWLQTLLDWGFVDTFRQIHPDVNDRFSWFDYRSKGFPDNRGLRIDVVLATPKLAA 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 A ID + RG KPSDH P+ + Sbjct: 241 KCIEADIDYELRGIEKPSDHAPIWSTFK 268 >gi|62179894|ref|YP_216311.1| exonuclease III [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62127527|gb|AAX65230.1| exonuclease III, may repair singlet oxygen induced lesions [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322714361|gb|EFZ05932.1| exonuclease III [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 268 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 77/268 (28%), Positives = 120/268 (44%), Gaps = 8/268 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A +++ PD+I LQETK D+ FP E + L Y++ GQK Sbjct: 1 MKFVSFNINGLRARPHQLEAIVEKRQPDVIGLQETKVHDEMFPLEEVAKLGYNVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122 + GVA+L+K PI + P D + Q R I A + + N Y P G Sbjct: 61 GHYGVALLTKATPISVRRGFPDDGEEAQRRIIMAEIPSPLGNITVINGYFPQGESRDHPL 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + + + L+ P++ GD NI P + + F Sbjct: 121 KFPAKAQFYQNLQNYLETELKCNNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +L G D R + +S++DY + + N+G+RID ++ S Sbjct: 181 PEEREWMSRLLKWGLVDTFRQANPQTMDKFSWFDYRSKGFVDNRGLRIDLLLASAPLAER 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 ID R KPSDH PV + + Sbjct: 241 CAETGIDYDIRSMEKPSDHAPVWATFRV 268 >gi|28897777|ref|NP_797382.1| exonuclease III [Vibrio parahaemolyticus RIMD 2210633] gi|260363798|ref|ZP_05776553.1| exodeoxyribonuclease III [Vibrio parahaemolyticus K5030] gi|260876941|ref|ZP_05889296.1| exodeoxyribonuclease III [Vibrio parahaemolyticus AN-5034] gi|260897916|ref|ZP_05906412.1| exodeoxyribonuclease III [Vibrio parahaemolyticus Peru-466] gi|28805990|dbj|BAC59266.1| exodeoxyribonuclease III [Vibrio parahaemolyticus RIMD 2210633] gi|308085493|gb|EFO35188.1| exodeoxyribonuclease III [Vibrio parahaemolyticus Peru-466] gi|308093887|gb|EFO43582.1| exodeoxyribonuclease III [Vibrio parahaemolyticus AN-5034] gi|308113909|gb|EFO51449.1| exodeoxyribonuclease III [Vibrio parahaemolyticus K5030] Length = 268 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 79/268 (29%), Positives = 132/268 (49%), Gaps = 9/268 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V ++N+N +RAR+H L A I ++ PD+I LQE K D+ FP E ++++ Y + GQK Sbjct: 1 MKVISFNINGLRARLHQLQALIDKHQPDVIGLQEIKVHDEAFPIEDVEAMGYKVYFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121 ++ GVA+L K +PI + P ++ + + N + + + N Y P G+ I Sbjct: 61 AHYGVAMLCKQEPIRVQKGFPTDNEEHQKRMIMATFENENGEKVTVLNGYFPQGDNINHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175 TK+ K + K + + + +E LI GD NI P + F Sbjct: 121 TKFPYKRQFYKDLMTYLNDHHSNDEQLIVMGDINISPIDSDIGIGEPNRKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R+ + L + GF D R + + +S++DY + + N+G+RID I+ +P Sbjct: 181 QPEEREWLKTLLDWGFEDTFRKLYPEVNDRFSWFDYRSRGFDDNRGLRIDVILATPSLAQ 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + ID + RG KPSDH P+ + Sbjct: 241 KCIESGIDYELRGIEKPSDHAPIWSTFK 268 >gi|160875927|ref|YP_001555243.1| exonuclease III [Shewanella baltica OS195] gi|160861449|gb|ABX49983.1| exodeoxyribonuclease III [Shewanella baltica OS195] gi|315268120|gb|ADT94973.1| exodeoxyribonuclease III [Shewanella baltica OS678] Length = 270 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 87/268 (32%), Positives = 131/268 (48%), Gaps = 9/268 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +RAR+H L A I + PDII LQETK D+ FP ++++ Y + G K Sbjct: 1 MKIVSFNINGLRARLHQLQALIDSHQPDIIGLQETKVHDEAFPLAEVEAMGYQVHYHGGK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122 ++ GVA+LSK P ++ P DD D Q R I TF N + L + N Y P G I Sbjct: 61 AHYGVAMLSKVAPEKLQKGFPTDDEDAQRRMIIGTFAQANGRPLTVFNGYFPQGESIDHP 120 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175 KY K + + + + +E + GD NI P D + F Sbjct: 121 TKYPAKRKFYQDLMHYLQTNHSNDEDIAIIGDINISPTDLDIGIGEVNRKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R+ + LQ+ G D R H YS++DY + + N+G+RID I+ +P + Sbjct: 181 QPEEREWLKTLQDWGLVDTFRQLHPERIERYSWFDYRSKGFDDNRGLRIDVILATPSLAA 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 L + +D RG KPSDH P+ + Sbjct: 241 RLVESDVDYDLRGIDKPSDHAPIWSTFK 268 >gi|240168902|ref|ZP_04747561.1| putative exodeoxyribonuclease III protein [Mycobacterium kansasii ATCC 12478] Length = 276 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 77/265 (29%), Positives = 122/265 (46%), Gaps = 7/265 (2%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +ATWNVNSIR R+ + WI + D++ +QETK D FP L L Y + G Sbjct: 5 TLRLATWNVNSIRTRLDRVLDWIARADVDVLAMQETKCADGQFPALPLFELGYEVAHVGF 64 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-----TQTLRIGNLYLPHGN 117 +NGVAI S+ ++ G + + AT +R+ +LY+P+G Sbjct: 65 DQWNGVAIASRVGIDDVQVGFDGQPTWSRKPEVAATAEARALGATCGGVRVWSLYVPNGR 124 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEE--PLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + Y K+ W+ A L + + AGD+NI P D ++ + Sbjct: 125 ALGDPHYTYKLDWLAALKDTAEGWLRDDPAAAIALAGDWNIAPTDDDVWSTEFYAGATHV 184 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 + R++F + + F D +R +Y++WDY + K +G+RID I+ SP Sbjct: 185 SEPERKAFNAIVDAQFADLVRPFAPGPGVYTYWDYTQLRFPKRQGMRIDFILGSPALARR 244 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVS 260 + A+I + R PSDH PV V Sbjct: 245 VVDAQIVREERKGKAPSDHAPVFVD 269 >gi|323968517|gb|EGB63923.1| exodeoxyribonuclease III [Escherichia coli M863] gi|327252867|gb|EGE64521.1| exodeoxyribonuclease III [Escherichia coli STEC_7v] Length = 268 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 77/266 (28%), Positives = 121/266 (45%), Gaps = 8/266 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A ++++ PD+I LQETK D FP E + L Y++ GQK Sbjct: 1 MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 + GVA+L+K PI + P D + Q R I A + + N Y P G Sbjct: 61 GHYGVALLTKETPIAVRRGFPDDGEEAQRRIIMAEIPSPLGNVTVINGYFPQGESRDHPI 120 Query: 124 -YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 + K + + + L+ E P++ GD NI P + + F Sbjct: 121 KFPAKAQFYQNLQNYLETELKRENPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +L + G D R + +S++DY + + N+G+RID ++ S Sbjct: 181 PEEREWMDRLISWGLVDTFRHANPETADRFSWFDYRSKGFDDNRGLRIDLLLASQPLADC 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 ID + R KPSDH PV + Sbjct: 241 CVETGIDYEIRSMEKPSDHAPVWATF 266 >gi|92113745|ref|YP_573673.1| exodeoxyribonuclease III [Chromohalobacter salexigens DSM 3043] gi|91796835|gb|ABE58974.1| Exodeoxyribonuclease III [Chromohalobacter salexigens DSM 3043] Length = 276 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 78/269 (28%), Positives = 129/269 (47%), Gaps = 11/269 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N IRAR+H L A + + PD+I LQETK +D FP E +++L YH+ GQK Sbjct: 1 MRLVSFNINGIRARLHQLEALVDAHAPDVIGLQETKVQDSEFPREAVEALGYHVAFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTH-LPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 + GVA+L++ P + + + + + L + N Y P G + Sbjct: 61 GHYGVALLTRQAPEAVYYGLPDDGEEAQRRLIGVRLACDDGEPLTVYNGYFPQGENVDHP 120 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175 K+ +K + R +R E L GD+NI P D + E F Sbjct: 121 TKFPNKRDFYARLTTLLQERHTPSERLAVMGDFNISPADIDIGIGEANRKRWLREGKTSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKN--KGIRIDHIMLSPEA 232 R+ +L + G +D R + +S++DY + + ++ +G+RID+IM++P Sbjct: 181 QPVEREWLARLVDWGLSDCYRLRYPEVDDRFSWFDYRSRGFERDPKRGLRIDYIMVTPAL 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + A ID + RG +PSDH PV L Sbjct: 241 CERVTDAGIDYELRGIQRPSDHAPVWAQL 269 >gi|107028675|ref|YP_625770.1| exodeoxyribonuclease III (xth) [Burkholderia cenocepacia AU 1054] gi|116690166|ref|YP_835789.1| exodeoxyribonuclease III Xth [Burkholderia cenocepacia HI2424] gi|105897839|gb|ABF80797.1| Exodeoxyribonuclease III [Burkholderia cenocepacia AU 1054] gi|116648255|gb|ABK08896.1| Exodeoxyribonuclease III [Burkholderia cenocepacia HI2424] Length = 258 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 84/256 (32%), Positives = 133/256 (51%), Gaps = 1/256 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ R ++ W+ ++ D++CLQE K D+ FP L+++ Y GQK Sbjct: 1 MKIATWNVNSLNVRKQHVLDWLAQSGTDVLCLQELKLPDEKFPRADLEAVGYRSWFTGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAIL + + + ++ + +RI + Y P+G + S K Sbjct: 61 TYNGVAILVRDT-LAVDESDVVRNIPGFDDPQQRVIAATVDGVRIVSAYFPNGQALDSDK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W+ + L+ L GDYNI P+ D ++P WE + + R F Sbjct: 120 FVYKMQWLDALQAWLRTELQRYPKLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +L +GF DA R +++WDY ++ +N G+RIDHI+LSP + S +D Sbjct: 180 AQLIELGFVDAFRRFEQPEKTFTWWDYRMMAFRRNAGLRIDHILLSPALAATCASCEVDR 239 Query: 244 KPRGWTKPSDHTPVIV 259 PR W +PSDHTPV+ Sbjct: 240 VPRTWEQPSDHTPVVA 255 >gi|254670248|emb|CBA05478.1| exodeoxyribonuclease III [Neisseria meningitidis alpha153] Length = 256 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 90/260 (34%), Positives = 134/260 (51%), Gaps = 4/260 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + TWNVNS+ R+ + + +N PDI+ LQE K + FP LQ + +H GQK Sbjct: 1 MKITTWNVNSLNVRLPQVQNLLADNPPDILVLQELKLDQDKFPAAALQMMGWHCVWSGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAI+S+ P ++ LP D Q R I AT +R+ N+Y +G + S K Sbjct: 61 TYNGVAIVSRNAPEDVHIGLPALPDDPQRRVIAATVGG----VRVINVYCVNGEALDSPK 116 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K W F + L+ GD+NI P DCY+P W + RQ F Sbjct: 117 FKYKEQWFAALTEFVRDEMTRYGKLVLLGDFNIAPADADCYDPEKWHEKIHCSSVERQWF 176 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + L ++G TD++R H Y+++DY + + G+RIDHI++SP + L R+D Sbjct: 177 KNLLDLGLTDSLRQVHPEGAFYTWFDYRGAMFQRKLGLRIDHILVSPAMAAALKDVRVDL 236 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 + R +PSDH PV D Sbjct: 237 ETRALERPSDHAPVAAEFDW 256 >gi|117919951|ref|YP_869143.1| exonuclease III [Shewanella sp. ANA-3] gi|117612283|gb|ABK47737.1| Exodeoxyribonuclease III [Shewanella sp. ANA-3] Length = 270 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 85/268 (31%), Positives = 130/268 (48%), Gaps = 9/268 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +R+R+H L A I + PDII LQETK D+ FP ++++ YH+ G K Sbjct: 1 MKIVSFNINGLRSRLHQLQALIDSHQPDIIGLQETKVHDEAFPLAEVEAMGYHVHYHGGK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122 ++ GVA+LSK P+++ D+ D Q R I TF N L + N Y P G I Sbjct: 61 AHYGVAMLSKVAPLKVQKGFATDEEDAQRRMIIGTFAQANGHPLTVLNGYFPQGESIDHP 120 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175 KY K + + + +E + GD NI P D + F Sbjct: 121 TKYPAKRKFYQDLMAHLHANHSNDEDIAIIGDINISPIDLDIGIGEVNRKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R+ + LQ G D R H YS++DY + + N+G+RID I+ +P + Sbjct: 181 QPEEREWLKTLQGWGLVDTFRQLHPDRCERYSWFDYRSKGFDDNRGLRIDVILATPSLAA 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 L + +D + RG KPSDH P+ + Sbjct: 241 RLVESDVDYELRGIDKPSDHAPIWSTFK 268 >gi|123965783|ref|YP_001010864.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9515] gi|123200149|gb|ABM71757.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9515] Length = 281 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 93/269 (34%), Positives = 148/269 (55%), Gaps = 4/269 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+R R+ + WIK NPDI+CLQETK D +FP + L Y + GQK Sbjct: 1 MLIATWNVNSVRTRLSQIINWIKNVNPDILCLQETKVIDNSFPLTPFEELGYEVTVHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT----INTQTLRIGNLYLPHGNPI 119 SYNGVAI+SK++ I+ ++ + + L+I N+Y+P+G+ + Sbjct: 61 SYNGVAIISKFKIENIIKGFTNENEEKSNFLNFNEQKRLISADINGLKIINVYVPNGSSL 120 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 S K+D KI W+ F +++ ++ + F GD+NI P D + P +E + Sbjct: 121 DSDKFDYKIKWLNHLSSFLDKQVREDDLVCFVGDFNIAPFDIDIHCPQKYEGGIMASKIE 180 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R++ +K+ F D+ R +S+WDY +++ NKG RIDHI +S +S L S Sbjct: 181 REALKKVIKGRFIDSFRIFEKNTGHWSWWDYRNNAYELNKGWRIDHIYISNNLSSQLKSC 240 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268 I+ R ++PSDH PV+++L+I + Sbjct: 241 VIERSQRENSQPSDHAPVLINLEIDNQSE 269 >gi|296128411|ref|YP_003635661.1| exodeoxyribonuclease III Xth [Cellulomonas flavigena DSM 20109] gi|296020226|gb|ADG73462.1| exodeoxyribonuclease III Xth [Cellulomonas flavigena DSM 20109] Length = 264 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 81/261 (31%), Positives = 131/261 (50%), Gaps = 3/261 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+NSIRAR+ A+++ D++ LQETK +D+ FP E ++L Y + T G Sbjct: 1 MLLATWNINSIRARVDRAVAFLERTGVDVLALQETKVKDEAFPREPFEALGYEVATHGYS 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT-LRIGNLYLPHGNPITST 122 +NGVAI+S+ ++ PG EA T +R+ +LY+P+G I Sbjct: 61 QWNGVAIVSRVGLTDVERGFPGQPTWGDPGVAEARALGATCGGVRVWSLYVPNGREIEDP 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIF--AGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 Y K+ W+ A L + GD+NI P D ++ + T R Sbjct: 121 HYTYKLDWLGALRDAAEGWLTADPRAQVALVGDWNIAPLDTDVWDIARFAGRTHVTPAER 180 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 Q+F+ L + G+++ R H Y++WDY + +N+G+RID SP + + R Sbjct: 181 QAFEALAHAGYSEVSRVHVPAEHTYTYWDYQQLRFPRNEGMRIDLTYASPTLAARVTGVR 240 Query: 241 IDTKPRGWTKPSDHTPVIVSL 261 I+ R +PSDH PV++ + Sbjct: 241 IERDERKGKQPSDHVPVVLEI 261 >gi|170721841|ref|YP_001749529.1| exodeoxyribonuclease III Xth [Pseudomonas putida W619] gi|169759844|gb|ACA73160.1| exodeoxyribonuclease III Xth [Pseudomonas putida W619] Length = 260 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 104/262 (39%), Positives = 154/262 (58%), Gaps = 5/262 (1%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 M + +AT+N+N I +R+ L AW++ PD+ CLQE K D FP E +++ Y Sbjct: 1 MKPLRIATFNINGIGSRLPALLAWLEREKPDVACLQELKAADTKFPREAIEAAGYGCLYM 60 Query: 61 GQKSYNGVAILSKY-QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 GQ S+NGVAIL++ QP+E+ LPG + D Q+R++EA + +G LYLP+GNP Sbjct: 61 GQPSWNGVAILARDSQPLEVRRGLPGMEDDSQSRYLEAAVQG----VLVGCLYLPNGNPQ 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K++ K+ W + ++ A L P + AGD+N++P D YNP W DA E Sbjct: 117 PGPKFEYKLRWFECLVKHAHDLLGSGHPTVLAGDFNVVPTDFDIYNPKSWLKDALLQPES 176 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R +Q L G+TDAIR + +Y+FWDY+ + W++N G+RIDH++LSP+ S L + Sbjct: 177 RNCYQALLEQGWTDAIRQLYPDERIYTFWDYFRNHWARNAGLRIDHLLLSPDIASHLKAG 236 Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261 +D R KPSDH P + L Sbjct: 237 GVDAWVRNEPKPSDHAPAWIEL 258 >gi|16331188|ref|NP_441916.1| exodeoxyribonuclease III [Synechocystis sp. PCC 6803] gi|1653682|dbj|BAA18594.1| exodeoxyribonuclease III [Synechocystis sp. PCC 6803] Length = 275 Score = 202 bits (514), Expect = 4e-50, Method: Composition-based stats. Identities = 91/264 (34%), Positives = 138/264 (52%), Gaps = 5/264 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A+WNVNS+R+R ++ W+ N D++CLQETK D++FP + + YH GQK Sbjct: 11 MDIASWNVNSVRSRQQHILDWLGTNPVDVLCLQETKVVDEDFPRQPFEEAGYHCHISGQK 70 Query: 64 SYNGVAILSKYQPIEIVTHL---PGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 SYNGVAI S+ ++ L + + +RI NLY+P+G+ + Sbjct: 71 SYNGVAIFSREPLQDVKIGFAALVEPALTGDLDEQKRVISGVYDGVRIVNLYVPNGSALD 130 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLI-FAGDYNIIPQPHDCYNPIIWENDACFT-LE 178 S KY K+ W+ + Q + P GD+NI P+ D ++P+ EN T +E Sbjct: 131 SEKYLYKLRWLNLLQTYLEQLRRSDTPEFLVCGDFNIAPEDRDIHDPVGRENHIMATAME 190 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 + L DA R + YS+WDY +S+N+G RIDH L+P+ Sbjct: 191 REALTEVLAIANLQDAFRKFTEETGHYSWWDYRTRGFSRNRGWRIDHHYLTPQLYDQAQK 250 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 ID +PRGW KPSDH PV+V+++ Sbjct: 251 CWIDREPRGWEKPSDHAPVVVTIN 274 >gi|325527267|gb|EGD04639.1| exodeoxyribonuclease III [Burkholderia sp. TJI49] Length = 258 Score = 202 bits (514), Expect = 5e-50, Method: Composition-based stats. Identities = 82/256 (32%), Positives = 129/256 (50%), Gaps = 1/256 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ R ++ W+ ++ D++CLQE K D+ FP L+++ Y GQK Sbjct: 1 MKIATWNVNSLNVRKQHVLDWLAQSGTDVLCLQELKLPDEKFPRADLEAIGYRSWFTGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAIL++ + + + +R + Y P+G S K Sbjct: 61 TYNGVAILARDTLPFDESDIVRNIPGFDDPQQRVVAVTIDG-VRFVSAYFPNGQAPDSDK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W+ + ++ L GDYNI P+ D ++P WE + + R F Sbjct: 120 FVYKMQWLDALQAWLRAEMQRYPKLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +L +GF DA R +++WDY ++ +N G+RIDHI+LSP S +D Sbjct: 180 AQLIELGFVDAFRRFEQPEKTFTWWDYRMFAFRRNAGLRIDHILLSPALADTCTSCVVDR 239 Query: 244 KPRGWTKPSDHTPVIV 259 PR W +PSDHTPV+ Sbjct: 240 TPRTWEQPSDHTPVVA 255 >gi|304391804|ref|ZP_07373746.1| exodeoxyribonuclease III [Ahrensia sp. R2A130] gi|303296033|gb|EFL90391.1| exodeoxyribonuclease III [Ahrensia sp. R2A130] Length = 265 Score = 202 bits (513), Expect = 5e-50, Method: Composition-based stats. Identities = 122/262 (46%), Positives = 179/262 (68%), Gaps = 5/262 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A+WN+N I+AR L W+K+ PDI+ LQE K+ D+NFP +++L Y+++T GQK Sbjct: 1 MKIASWNINGIKARHDVLIEWLKQAEPDIVGLQEIKSVDENFPASEIEALGYNVQTHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTH----LPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +NGVA+LS+ E+ +D D QARFIE F+I ++LR+ +LYLP+GNP+ Sbjct: 61 GFNGVALLSRLPFDEVNRGLPLLRESEDEDEQARFIEGVFSIEGKSLRVVSLYLPNGNPV 120 Query: 120 TSTK-YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + +D K+ W+ R +A+ RL LEEPLI AGDYN+IPQP+DC+NP +WE DA F E Sbjct: 121 DDPRKFDYKLRWMDRLHAWAADRLALEEPLILAGDYNVIPQPNDCWNPKVWEGDALFRDE 180 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R F+ L+N+GFT+A+R++ + +Y+FWDY A +W KN GIRIDH+++S EA + + Sbjct: 181 TRSRFEALKNLGFTEALRSSANADGIYTFWDYQAGAWPKNHGIRIDHLLMSAEAADMFNG 240 Query: 239 ARIDTKPRGWTKPSDHTPVIVS 260 ID+ R W KPSDH P+ + Sbjct: 241 CGIDSFVRDWEKPSDHVPIWLE 262 >gi|325272311|ref|ZP_08138717.1| exonuclease III [Pseudomonas sp. TJI-51] gi|324102557|gb|EGB99997.1| exonuclease III [Pseudomonas sp. TJI-51] Length = 270 Score = 202 bits (513), Expect = 5e-50, Method: Composition-based stats. Identities = 86/269 (31%), Positives = 134/269 (49%), Gaps = 11/269 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + +N+N +RAR H LAA I+++ PD+I LQETK D+ FP +Q+L YH+ GQK Sbjct: 1 MKIVCFNINGLRARPHQLAALIEKHQPDVIGLQETKVSDEQFPLADVQALGYHVHYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122 + GVA+LS+ P+ + GD+ D Q RFI TF + I N Y P G Sbjct: 61 GHYGVALLSRQAPLSLHKGFAGDEEDAQRRFIWGTFADAQGNPITIMNGYFPQGESRDHP 120 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175 K+ K + + ++P++ GD NI PQ D + F Sbjct: 121 TKFPAKQRFYSDLQVLLESQFRNDQPVLVMGDMNISPQDCDIGIGPDNAKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232 E R+ ++L+ G D+ R + + +S++DY + + +G+RID IM S Sbjct: 181 LPEEREWMERLKGWGLVDSFRHLYPDVNDRFSWFDYRSRGFEDEPKRGLRIDLIMASHAL 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + +A +D + RG KPSDH P+ + L Sbjct: 241 VPRIKAAGVDYELRGMEKPSDHAPIWLEL 269 >gi|148242745|ref|YP_001227902.1| exodeoxyribonuclease III [Synechococcus sp. RCC307] gi|147851055|emb|CAK28549.1| Exodeoxyribonuclease III [Synechococcus sp. RCC307] Length = 275 Score = 202 bits (513), Expect = 5e-50, Method: Composition-based stats. Identities = 90/262 (34%), Positives = 136/262 (51%), Gaps = 4/262 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSIR+R +L W+++ PD++ LQETK ED FP ++ Y GQK Sbjct: 1 MRIATWNVNSIRSRQSHLLRWLEQAKPDVLGLQETKVEDAQFPAAAMEEAGYRTVISGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHL----PGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 SYNGVA+LS+ E+ PGD+ ++ + + +R+ NLY+P+G+ + Sbjct: 61 SYNGVALLSREPLEEVRIGFDALLPGDEAAIELSQQKRVISAWVDGVRVLNLYVPNGSEV 120 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 S KY K++W+ R+ + E EP GD+NI P+ D +NP + Sbjct: 121 GSEKYAYKLAWLDCLRRYLDVQREQGEPFCMLGDFNIGPEARDLHNPERSTGGIMASDAE 180 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R++ + DA R +S+WDY + +W+ ++G RIDH+ L E + Sbjct: 181 REALKACLGDDLRDAFRMFEQGSGHWSWWDYRSGAWNGDRGWRIDHLYLDEELQQRALAC 240 Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261 I RG KPSDH PV V L Sbjct: 241 EIHKSERGLEKPSDHAPVSVDL 262 >gi|269960966|ref|ZP_06175335.1| exodeoxyribonuclease III [Vibrio harveyi 1DA3] gi|269834185|gb|EEZ88275.1| exodeoxyribonuclease III [Vibrio harveyi 1DA3] Length = 268 Score = 202 bits (513), Expect = 5e-50, Method: Composition-based stats. Identities = 82/268 (30%), Positives = 131/268 (48%), Gaps = 9/268 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V ++N+N +RAR+H L A I ++ PD+I LQE K D+ FP E ++++ Y + GQK Sbjct: 1 MKVISFNINGLRARLHQLQALIDKHQPDVIGLQEIKVHDEAFPIEDVEAMGYKVYFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121 ++ GVA+L K +PI + P ++ + + N + + + N Y P G+ I Sbjct: 61 AHYGVAMLCKQEPISVQKGFPTDNEEHQKRMIMATFEDENEEKVTVLNGYFPQGDNIAHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175 TKY K + K + + + +E LI GD NI P + F Sbjct: 121 TKYPYKRQFYKDLMTYLNNHHSNDEQLIVMGDINISPIDADIGIGEPNRKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R+ Q L + GF D R H +S++DY + + N+G+RID I+ +P Sbjct: 181 QPEEREWLQTLLDWGFEDTFRNLHPEVDDRFSWFDYRSRGFDDNRGLRIDVILATPSLAK 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + ID + RG KPSDH P+ + Sbjct: 241 KCIESDIDYELRGIEKPSDHAPIWSTFK 268 >gi|66045712|ref|YP_235553.1| exonuclease III [Pseudomonas syringae pv. syringae B728a] gi|63256419|gb|AAY37515.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Pseudomonas syringae pv. syringae B728a] gi|330971266|gb|EGH71332.1| exonuclease III [Pseudomonas syringae pv. aceris str. M302273PT] Length = 270 Score = 202 bits (513), Expect = 5e-50, Method: Composition-based stats. Identities = 88/269 (32%), Positives = 133/269 (49%), Gaps = 11/269 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +RAR H LAA I ++ PD+I LQETK D+ FP +++L YH+ GQK Sbjct: 1 MKIISFNINGLRARPHQLAALIDKHQPDVIGLQETKVSDEQFPQAEVEALGYHVHFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122 + GVA+LS+ P+ + GDD + Q RFI T+ N Q + I N Y P G Sbjct: 61 GHYGVALLSRNAPLALHKGFEGDDEESQKRFIWGTYADSNGQPVTIMNGYFPQGESRDHP 120 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175 K+ K + + ++PLI GD NI PQ D + F Sbjct: 121 TKFPAKQRFYENLQTLLEGHFRNDQPLIVMGDVNISPQDCDIGIGADNAKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232 E R+ ++L+N G D+ R + +S++DY + + +G+RID IM S Sbjct: 181 LPEEREWMERLKNWGLVDSFRHLYPEVVDRFSWFDYRSRGFEDEPKRGLRIDLIMTSTGL 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + A +D R KPSDH P+ + L Sbjct: 241 QPRIKEAGVDYDLRAMEKPSDHAPIWLEL 269 >gi|289673873|ref|ZP_06494763.1| exonuclease III [Pseudomonas syringae pv. syringae FF5] Length = 270 Score = 202 bits (513), Expect = 5e-50, Method: Composition-based stats. Identities = 88/269 (32%), Positives = 134/269 (49%), Gaps = 11/269 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +RAR H LAA I ++ PD+I LQETK D+ FP +++L YH+ GQK Sbjct: 1 MKIVSFNINGLRARPHQLAALIDKHQPDVIGLQETKVSDEQFPQAEVEALGYHVHFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122 + GVA+LS+ P+ + GDD + Q RFI T+ N Q + I N Y P G Sbjct: 61 GHYGVALLSRNAPLALHKGFEGDDEESQKRFIWGTYADSNGQPVTIMNGYFPQGESRDHP 120 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175 K+ K + + + ++PLI GD NI PQ D + F Sbjct: 121 TKFPAKQRFYENLQTLLEGQFRNDQPLIVMGDVNISPQDCDIGIGADNAKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232 E R+ ++L+N G D+ R + +S++DY + + +G+RID IM S Sbjct: 181 LPEEREWMERLKNWGLVDSFRHLYPEVVDRFSWFDYRSRGFEDEPKRGLRIDLIMTSTGL 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + A +D R KPSDH P+ + L Sbjct: 241 QPRIKEAGVDYDLRAMEKPSDHAPIWLEL 269 >gi|209548989|ref|YP_002280906.1| exodeoxyribonuclease III Xth [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209534745|gb|ACI54680.1| exodeoxyribonuclease III Xth [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 263 Score = 202 bits (513), Expect = 5e-50, Method: Composition-based stats. Identities = 115/264 (43%), Positives = 163/264 (61%), Gaps = 5/264 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+NVN I R+ L W+KE+ PD++CLQE KT+D FP + ++ Y GQ+ Sbjct: 1 MKIATYNVNGINGRLAILLRWLKEDAPDVVCLQELKTDDAGFPRKEIERSGYGAVWHGQR 60 Query: 64 SYNGVAILSKYQ-PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 S+NGVAIL+K + PI LPGD D +R+IEA + IG LYLP+GNP Sbjct: 61 SWNGVAILAKDKTPILTRRGLPGDPDDSHSRYIEAVIDG----IVIGCLYLPNGNPFPGA 116 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K+D K+ W +R +A++ L LE P I AGD+N++P D Y P W +DA F EVR++ Sbjct: 117 KFDYKLRWFRRLHDYAAELLALEVPSILAGDFNVMPTEIDVYKPERWLDDALFRPEVRKA 176 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 + L G+TDA+R H +Y+FW Y+ +S+ ++ G+RIDH +LSP L SA + Sbjct: 177 YAHLVGQGWTDAVRHLHPHERIYTFWKYWRNSFERDAGLRIDHFLLSPAVAPWLRSATVR 236 Query: 243 TKPRGWTKPSDHTPVIVSLDIPEP 266 KPRGW SDH PV++ LD+P Sbjct: 237 RKPRGWEHTSDHAPVMIELDVPSV 260 >gi|49475800|ref|YP_033841.1| exodeoxyribonuclease III [Bartonella henselae str. Houston-1] gi|49238607|emb|CAF27848.1| Exodeoxyribonuclease III [Bartonella henselae str. Houston-1] Length = 260 Score = 202 bits (513), Expect = 5e-50, Method: Composition-based stats. Identities = 132/259 (50%), Positives = 178/259 (68%), Gaps = 1/259 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + TWN+ I+AR L W+++N PDI+CLQE K+ D+NFP + ++SL YHIET GQK Sbjct: 1 MKIVTWNIAGIKARHETLYQWLQQNRPDIVCLQEIKSTDENFPRDAIESLGYHIETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 S+NGVAILSK P E++ LPG+D D Q R+IEA ++ N +R+ +LYLP+GNPI S K Sbjct: 61 SFNGVAILSKKTPDEVIRQLPGNDKDEQTRYIEAVYSTNKGVIRVASLYLPNGNPINSEK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W++R A L+ EEPL+ AGDYN+IP P D P W +DA F + RQ+F Sbjct: 121 YPYKMEWMERLYTHAKSLLKYEEPLVLAGDYNVIPTPLDAKTPKEWSDDALFLPQTRQAF 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q++ ++GF DAIR DT +SFWD+ A +W KN GIRIDH++LSPEA L A Sbjct: 181 QRIIHLGFYDAIRNVTDTP-SFSFWDFQAAAWRKNNGIRIDHLLLSPEAVDQLICAYSQK 239 Query: 244 KPRGWTKPSDHTPVIVSLD 262 + RG+ KPSDHTPV + L+ Sbjct: 240 EVRGYQKPSDHTPVWIDLN 258 >gi|167586711|ref|ZP_02379099.1| Exodeoxyribonuclease III xth [Burkholderia ubonensis Bu] Length = 258 Score = 202 bits (513), Expect = 5e-50, Method: Composition-based stats. Identities = 84/256 (32%), Positives = 126/256 (49%), Gaps = 1/256 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ R ++ W+ ++ D++CLQE K D FP L++ Y GQK Sbjct: 1 MKIATWNVNSLNVRKQHVLDWLAQSGTDVLCLQELKLPDDKFPRADLEAAGYRSWFTGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAIL++ + + + T RI + Y P+G S K Sbjct: 61 TYNGVAILARDTLPFDESDVTRNVPGFDDPQQRVIAVTIDGT-RIISAYFPNGQAPDSDK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W+ + L+ L GDYNI P+ D ++P WE + + R F Sbjct: 120 FVYKMQWLDALNAWLRSELQRYPKLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 L +G DA R +++WDY ++ +N G+RIDHI+LSP S +D Sbjct: 180 AGLLELGLVDAFRRFEQPEKTFTWWDYRMMAFRRNAGLRIDHILLSPALAETCTSCVVDR 239 Query: 244 KPRGWTKPSDHTPVIV 259 PR W +PSDHTPV+ Sbjct: 240 TPRTWEQPSDHTPVVA 255 >gi|153213065|ref|ZP_01948603.1| exodeoxyribonuclease III [Vibrio cholerae 1587] gi|124116112|gb|EAY34932.1| exodeoxyribonuclease III [Vibrio cholerae 1587] Length = 268 Score = 202 bits (513), Expect = 5e-50, Method: Composition-based stats. Identities = 80/268 (29%), Positives = 128/268 (47%), Gaps = 9/268 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V ++N+N +RAR+H L A I ++ PD+I LQE K D+ FP + ++++ Y + GQK Sbjct: 1 MKVISFNINGLRARLHQLQALIDKHQPDVIGLQEIKVHDEAFPRQEVEAMGYQVYFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDL-DVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121 ++ GVAIL K P+E++ P D+ + + N Q I N Y P G+ + Sbjct: 61 AHYGVAILCKQTPVEVIKGFPTDNAEHQKRMIMATFADQNGQKTTILNGYFPQGDNVEHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175 TK+ K + + + + + E L+ GD NI P + F Sbjct: 121 TKFPYKRQFYRDLMTYLREHRSNSERLVVMGDINISPLDLDIGIGEANRKRWLQTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R+ Q L + G D R H +S++DY + + N+G+RID I+ +P Sbjct: 181 QPEEREWLQTLLDWGLVDTFRQLHPDVSDQFSWFDYRSRGFEDNRGLRIDVILATPTLAE 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 A ID + R KPSDH P+ + Sbjct: 241 TCQEAGIDYELRAIDKPSDHAPIWATFK 268 >gi|261378301|ref|ZP_05982874.1| exodeoxyribonuclease III [Neisseria cinerea ATCC 14685] gi|269145396|gb|EEZ71814.1| exodeoxyribonuclease III [Neisseria cinerea ATCC 14685] Length = 256 Score = 202 bits (513), Expect = 5e-50, Method: Composition-based stats. Identities = 89/260 (34%), Positives = 136/260 (52%), Gaps = 4/260 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + TWNVNS+ R+ + + +N+PD++ LQE K + FP LQ + +H GQK Sbjct: 1 MKITTWNVNSLNVRLPQVQNLLADNSPDVLVLQELKLDQDKFPAAALQMMGWHCVWSGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAI+S+ P ++ LP D Q R I AT +R+ N+Y +G + S K Sbjct: 61 TYNGVAIISRSVPQDVHFGLPSLPDDPQRRVIAATVGG----VRVINVYCVNGEALDSPK 116 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K W F + L+ GD+NI P DCY+P W + RQ F Sbjct: 117 FKYKEQWFAALTEFVRDEMTRHGKLVLLGDFNIAPADADCYDPEKWHEKIHCSSIERQWF 176 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q L ++G TD++R H Y+++DY + + G+RIDHI+++ E ++L R+D Sbjct: 177 QNLLDLGLTDSLRHIHPEGAFYTWFDYRGAMFQRKLGLRIDHILVTSEMAAVLKDVRVDL 236 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 R +PSDH PV D+ Sbjct: 237 DTRALERPSDHAPVAAEFDL 256 >gi|301156424|emb|CBW15895.1| exonuclease III [Haemophilus parainfluenzae T3T1] Length = 267 Score = 202 bits (513), Expect = 5e-50, Method: Composition-based stats. Identities = 81/267 (30%), Positives = 128/267 (47%), Gaps = 8/267 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A I++ PD+I LQE K D++FP+ ++L YH+ GQK Sbjct: 1 MKFISFNINGLRARPHQLEAIIEKYQPDVIGLQEIKVADEDFPYTITENLGYHVFHHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122 + GVA+L+K +P + P D+ D Q R I A L + N Y P G T Sbjct: 61 GHYGVALLTKQEPKAVRRGFPTDNEDAQKRIIMADLETPFGLLTVINGYFPQGESRAHET 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + R+ Q + P++ GD NI P + + F Sbjct: 121 KFPAKEKFYADLQRYLEQDHDKANPVLIMGDMNISPSDLDIGIGDENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +Q+L + G D R + T + +S++DY + + N+G+RIDHI+++ + Sbjct: 181 PEEREWYQRLYDYGLEDTFRKLNPTVNDKFSWFDYRSKGFDDNRGLRIDHILVNRQLAER 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262 I R KPSDH P+ Sbjct: 241 CVDVGIALDIRAMEKPSDHAPIWAEFK 267 >gi|28198769|ref|NP_779083.1| exodeoxyribonuclease III [Xylella fastidiosa Temecula1] gi|28056860|gb|AAO28732.1| exodeoxyribonuclease III [Xylella fastidiosa Temecula1] Length = 262 Score = 202 bits (513), Expect = 5e-50, Method: Composition-based stats. Identities = 86/261 (32%), Positives = 136/261 (52%), Gaps = 6/261 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A+WNVNS+ R+ L W+ E PD++ LQETK ED FP L +L Y GQK Sbjct: 1 MRIASWNVNSLNVRLSQLQQWLVEAAPDVLGLQETKLEDHQFPEAALAALGYVSVYAGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVA+L++ ++ +P +R+ NLY+ +G + + K Sbjct: 61 TYNGVALLARVALEDVQVGIP-----EFEDVQRRVIAATVDGIRVVNLYVVNGQEVGTDK 115 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+SW+ + ++ L+ L+ GD+NI P D Y+P +W D T ++ Sbjct: 116 YAYKLSWLDAVYHWLAEELQRYPRLVVLGDFNIAPDARDVYDPQVWNEDHILTSTTERAA 175 Query: 184 -QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 KL +G D R H ++S+WDY S+ +N+G+RID ++S + ++ ID Sbjct: 176 LDKLLGLGLHDGFRLHHQDAGIFSWWDYRQASFRRNRGLRIDLTLVSEALRAQAVASGID 235 Query: 243 TKPRGWTKPSDHTPVIVSLDI 263 PRGW +PSDH P + L + Sbjct: 236 RVPRGWERPSDHAPAWIELAL 256 >gi|126174923|ref|YP_001051072.1| exonuclease III [Shewanella baltica OS155] gi|153001253|ref|YP_001366934.1| exonuclease III [Shewanella baltica OS185] gi|217972826|ref|YP_002357577.1| exonuclease III [Shewanella baltica OS223] gi|125998128|gb|ABN62203.1| Exodeoxyribonuclease III [Shewanella baltica OS155] gi|151365871|gb|ABS08871.1| exodeoxyribonuclease III [Shewanella baltica OS185] gi|217497961|gb|ACK46154.1| exodeoxyribonuclease III [Shewanella baltica OS223] Length = 270 Score = 202 bits (513), Expect = 5e-50, Method: Composition-based stats. Identities = 87/268 (32%), Positives = 131/268 (48%), Gaps = 9/268 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +RAR+H L A I + PDII LQETK D+ FP ++++ Y + G K Sbjct: 1 MKIVSFNINGLRARLHQLQALIDSHQPDIIGLQETKVHDEAFPLADVEAMGYQVHYHGGK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122 ++ GVA+LSK P ++ P DD D Q R I TF N + L + N Y P G I Sbjct: 61 AHYGVAMLSKVAPEKLQKGFPTDDEDAQRRMIIGTFAQANGRPLTVFNGYFPQGESIDHP 120 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175 KY K + + + + +E + GD NI P D + F Sbjct: 121 TKYPAKRKFYQDLMHYLQTNHSNDEDIAIIGDINISPTDLDIGIGEVNRKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R+ + LQ+ G D R H YS++DY + + N+G+RID I+ +P + Sbjct: 181 QPEEREWLKTLQDWGLVDTFRQLHPERIERYSWFDYRSKGFDDNRGLRIDVILATPSLAA 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 L + +D RG KPSDH P+ + Sbjct: 241 RLVESDVDYDLRGIDKPSDHAPIWSTFK 268 >gi|328473247|gb|EGF44095.1| exonuclease III [Vibrio parahaemolyticus 10329] Length = 268 Score = 202 bits (513), Expect = 6e-50, Method: Composition-based stats. Identities = 79/268 (29%), Positives = 133/268 (49%), Gaps = 9/268 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V ++N+N +RAR+H L A I ++ PD+I LQE K D+ FP E ++++ Y + GQK Sbjct: 1 MKVISFNINGLRARLHQLQALIDKHQPDVIGLQEIKVHDEAFPIEDVEAMGYKVYFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121 ++ GVA+L K +PI + P ++ + + N + + + N Y P G+ I+ Sbjct: 61 AHYGVAMLCKQEPIRVQKGFPTDNEEHQKRMIMVTFEDENGEKVTVLNGYFPQGDNISHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175 TK+ K + K + + + +E LI GD NI P + F Sbjct: 121 TKFPYKRQFYKDLMTYLNDHHSNDEQLIVMGDINISPIDSDIGIGEPNRKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R+ + L + GF D R + + +S++DY + + N+G+RID I+ +P Sbjct: 181 QPEEREWLKTLLDWGFEDTFRKLYPEVNDRFSWFDYRSRGFDDNRGLRIDVILATPSLAQ 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + ID + RG KPSDH P+ + Sbjct: 241 KCIESGIDYELRGIEKPSDHAPIWSTFK 268 >gi|319404431|emb|CBI78034.1| exodeoxyribonuclease III [Bartonella rochalimae ATCC BAA-1498] Length = 260 Score = 202 bits (513), Expect = 6e-50, Method: Composition-based stats. Identities = 136/259 (52%), Positives = 182/259 (70%), Gaps = 1/259 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+ I+AR L W+K+N PD++CLQE K+ D+NFP +T+++L YHIET GQK Sbjct: 1 MKIATWNIAGIKARHETLCKWLKQNQPDVVCLQEIKSVDENFPRDTIENLGYHIETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 S+NGVAILSK P E++ LPG++ D+QAR+IE ++ NT ++R+ +LYLP+GNPI S K Sbjct: 61 SFNGVAILSKTVPDEVILQLPGNNNDMQARYIETVYSTNTGSIRVASLYLPNGNPINSEK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y KI W+KR A L EEPLI AGDYN+IP P D NP W NDA F ++RQ F Sbjct: 121 YLYKIEWMKRLYTHAKSLLAYEEPLILAGDYNVIPTPLDAKNPQEWSNDALFLPQIRQIF 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q + ++GF DAIR D +SFWD+ A++W KN GIRIDH++LSPEA L A T Sbjct: 181 QCITHLGFYDAIRNVTDAP-SFSFWDFQANAWKKNNGIRIDHLLLSPEAADQLICAYSQT 239 Query: 244 KPRGWTKPSDHTPVIVSLD 262 + RG+ KPSDH P+ + L+ Sbjct: 240 EARGYQKPSDHVPIWIELN 258 >gi|91763300|ref|ZP_01265264.1| exodeoxyribonuclease III [Candidatus Pelagibacter ubique HTCC1002] gi|91717713|gb|EAS84364.1| exodeoxyribonuclease III [Candidatus Pelagibacter ubique HTCC1002] Length = 258 Score = 202 bits (513), Expect = 6e-50, Method: Composition-based stats. Identities = 95/258 (36%), Positives = 157/258 (60%), Gaps = 1/258 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + +WNVNS+RARI N+ ++++ +P+++ +QE KT+D+ FP++ +L+Y GQK Sbjct: 1 MIITSWNVNSVRARIENIKEYLQKFSPNVVMMQEIKTQDETFPYDDFSALDYESHVFGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 SYNGVAI+SK++ + L D L + +++ N+Y P+GNP+ + K Sbjct: 61 SYNGVAIISKHKLENVRIDLIKDKLKQSRIISA-ELKHKKKNVQLINIYTPNGNPVDTDK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K W+ + ++ + E +I AGD+NI+P D YN +E+DA + LE+R+ F Sbjct: 120 YTYKKDWLDKLIKQLKTLSKKNENIILAGDFNILPSAEDAYNIKGFEDDALYRLEIRKKF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +++ N+GF DA R H Y++WDY +W KN G+RIDH ++S +++ + I+ Sbjct: 180 REMINLGFHDAYRHIHGEKEGYTYWDYMRGAWQKNNGLRIDHFLVSNSLLNIVKNVNINK 239 Query: 244 KPRGWTKPSDHTPVIVSL 261 PRG KPSDHTP+ + L Sbjct: 240 DPRGKEKPSDHTPIEIEL 257 >gi|304411895|ref|ZP_07393506.1| exodeoxyribonuclease III [Shewanella baltica OS183] gi|307303337|ref|ZP_07583092.1| exodeoxyribonuclease III [Shewanella baltica BA175] gi|304349755|gb|EFM14162.1| exodeoxyribonuclease III [Shewanella baltica OS183] gi|306913697|gb|EFN44119.1| exodeoxyribonuclease III [Shewanella baltica BA175] Length = 270 Score = 202 bits (513), Expect = 6e-50, Method: Composition-based stats. Identities = 87/268 (32%), Positives = 131/268 (48%), Gaps = 9/268 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +RAR+H L A I + PDII LQETK D+ FP ++++ Y + G K Sbjct: 1 MKIVSFNINGLRARLHQLQALIDSHQPDIIGLQETKVHDEAFPLADVEAMGYQVHYHGGK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122 ++ GVA+LSK P ++ P DD D Q R I TF N + L + N Y P G I Sbjct: 61 AHYGVAMLSKVAPEKLQKGFPTDDEDAQRRMIIGTFSQANGRPLTVFNGYFPQGESIDHP 120 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175 KY K + + + + +E + GD NI P D + F Sbjct: 121 TKYPAKRKFYQDLMHYLQTNHSNDEDIAIIGDINISPTDLDIGIGEVNRKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R+ + LQ+ G D R H YS++DY + + N+G+RID I+ +P + Sbjct: 181 QPEEREWLKTLQDWGLVDTFRQLHPERIERYSWFDYRSKGFDDNRGLRIDVILATPSLAA 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 L + +D RG KPSDH P+ + Sbjct: 241 RLVESDVDYDLRGIDKPSDHAPIWSTFK 268 >gi|94310134|ref|YP_583344.1| exodeoxyribonuclease III [Cupriavidus metallidurans CH34] gi|93353986|gb|ABF08075.1| exodeoxyribonuclease III (xth) [Cupriavidus metallidurans CH34] Length = 265 Score = 202 bits (513), Expect = 6e-50, Method: Composition-based stats. Identities = 82/265 (30%), Positives = 137/265 (51%), Gaps = 6/265 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNP-----DIICLQETKTEDKNFPFETLQSLNYHIE 58 + +A+WNVNS++ R+ + W+ + D +CLQE K D +P LQ+ +H Sbjct: 1 MRIASWNVNSLKVRLPQVLQWLGAQDAAGTPIDALCLQELKLPDDKYPLAELQAAGFHSI 60 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 GQK+YNGVAIL++ + + T + + + +R+ + Y P+G Sbjct: 61 FTGQKTYNGVAILARNAAMPVPTDVVRNIPGYEDAQQRVIAGTYGD-VRLISAYFPNGQA 119 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + S K+ K+ W+K + + + L GD+NI P+ D ++P WE + + Sbjct: 120 LDSDKFVYKLDWLKAMIEWLRAEMTRYPKLALLGDFNIAPEDRDVHDPAKWEGQNLVSPQ 179 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R +FQ L +G D+ R ++S+WDY + +N G+RIDHI+LS + + Sbjct: 180 ERDAFQTLIGLGLVDSFRMFEQPEKMFSWWDYRMMGFRRNAGLRIDHILLSADLARQCAT 239 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263 ID +PR W +PSDHTPV+ +L + Sbjct: 240 CVIDKEPRRWEQPSDHTPVVATLTL 264 >gi|260913979|ref|ZP_05920453.1| exodeoxyribonuclease III [Pasteurella dagmatis ATCC 43325] gi|260632066|gb|EEX50243.1| exodeoxyribonuclease III [Pasteurella dagmatis ATCC 43325] Length = 267 Score = 202 bits (513), Expect = 6e-50, Method: Composition-based stats. Identities = 80/266 (30%), Positives = 125/266 (46%), Gaps = 8/266 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +RAR H L A I+ PD++ LQE K D+ FP+E ++ L YH+ GQK Sbjct: 1 MKIISFNINGLRARPHQLEAIIERYQPDVLGLQEIKVADEVFPYELVEHLGYHVFHHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122 + GVA+L+K +P + P D D Q R I A F + L + N Y P G T Sbjct: 61 GHYGVALLTKQEPKAVRKGFPTDAEDAQKRIIMADFETDFGLLTVVNGYFPQGESRQHET 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + ++ + ++ P+I GD NI P + + F Sbjct: 121 KFPAKEKFYADLQQYLEKDHNVDNPIIIMGDMNISPTDLDIGIGDENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +L G D R + + +S++DY + + N+G+RIDHI+ + + Sbjct: 181 PEEREWMNRLYGYGLVDTFRHLNPDVNDKFSWFDYRSKGFDDNRGLRIDHIIANHSLAAR 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 I R KPSDH PV Sbjct: 241 CVDTGIALDIRAMEKPSDHAPVWAEF 266 >gi|325203504|gb|ADY98957.1| exodeoxyribonuclease III [Neisseria meningitidis M01-240355] Length = 256 Score = 202 bits (513), Expect = 6e-50, Method: Composition-based stats. Identities = 90/260 (34%), Positives = 134/260 (51%), Gaps = 4/260 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + TWNVNS+ R+ + + +N PDI+ LQE K + FP LQ + +H GQK Sbjct: 1 MKITTWNVNSLNVRLPQVQNLLADNPPDILVLQELKLDQDKFPAAALQMMGWHCVWSGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAI+S+ P ++ LP D Q R I AT +R+ N+Y +G + S K Sbjct: 61 TYNGVAIVSRNAPEDVHIVLPALPDDPQRRVIAATVGG----VRVINVYCVNGEALDSPK 116 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K W F + L+ GD+NI P DCY+P W + RQ F Sbjct: 117 FKYKEQWFAALTEFVRDEMTRYGKLVLLGDFNIAPADADCYDPEKWHEKIHCSSVERQWF 176 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + L ++G TD++R H Y+++DY + + G+RIDHI++SP + L R+D Sbjct: 177 KNLLDLGLTDSLRQVHPEGAFYTWFDYRGAMFQRKLGLRIDHILVSPAMAAALKDVRVDL 236 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 + R +PSDH PV D Sbjct: 237 ETRALERPSDHAPVTAEFDW 256 >gi|261252552|ref|ZP_05945125.1| exodeoxyribonuclease III [Vibrio orientalis CIP 102891] gi|260935943|gb|EEX91932.1| exodeoxyribonuclease III [Vibrio orientalis CIP 102891] Length = 268 Score = 201 bits (512), Expect = 6e-50, Method: Composition-based stats. Identities = 82/268 (30%), Positives = 135/268 (50%), Gaps = 9/268 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V ++N+N +RAR+H L A I ++ PD+I LQE K D+ FP E ++++ Y + GQK Sbjct: 1 MKVISFNINGLRARLHQLQAVIDKHQPDVIGLQEIKVHDEAFPLEDVEAMGYKVYFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT-FTINTQTLRIGNLYLPHGNPITS- 121 ++ GVA+L K +P+ + P D+ D Q R I T N + + + N Y P G+ I Sbjct: 61 AHYGVAMLCKKEPLSVQKGFPTDNEDHQKRMIMVTLEDDNGEKVTVLNGYFPQGDNIGHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175 TK+ K + + + + +E LI GD NI P + F Sbjct: 121 TKFPYKRQFYSDLMTYLNDHHSNDEQLIVMGDINISPIDADIGIGEPNRKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R+ + L + GF D R H + +S++DY + + N+G+RID ++ +P+ Sbjct: 181 QPEEREWLKTLLDWGFVDTFRQIHPDVNDRFSWFDYRSKGFPDNRGLRIDVVLATPKLAE 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + +D + RG KPSDH P+ + Sbjct: 241 KCIESDVDYELRGIEKPSDHAPIWSTFK 268 >gi|124514320|gb|EAY55834.1| Exodeoxyribonuclease III [Leptospirillum rubarum] Length = 265 Score = 201 bits (512), Expect = 6e-50, Method: Composition-based stats. Identities = 78/257 (30%), Positives = 127/257 (49%), Gaps = 5/257 (1%) Query: 7 ATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYN 66 TWNVNS++ R+ + W+ D++CLQETK D FPF+ + + Y GQ +YN Sbjct: 14 TTWNVNSLKVRLPQVLDWLLREKADVVCLQETKLPDAQFPFQAFREIGYDAVWSGQPTYN 73 Query: 67 GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDD 126 GVAILS T + D + +RI N+Y+P+G + S K+ Sbjct: 74 GVAILSNTPIEMTETSMDDHPDDHRRFLSARVRG-----VRIVNVYVPNGQDLDSPKFAY 128 Query: 127 KISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL 186 K+ W+ R R+ + +P++ GD+NI+P D ++P +++ + R + + Sbjct: 129 KLEWLNRLTRYIEKVRAAPDPVLLMGDFNIVPGDLDTWDPAGFKDQIFHSPPERNALGNI 188 Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR 246 GF D R + +S+WDY S+ +N+G+RID I+ +P + ID + R Sbjct: 189 FRTGFADLYRTLYPDRQEFSWWDYRMGSFHRNRGLRIDLILSTPPLSEQCQEVFIDREAR 248 Query: 247 GWTKPSDHTPVIVSLDI 263 +PSDH PV + Sbjct: 249 KAERPSDHVPVTALFAL 265 >gi|254286781|ref|ZP_04961735.1| exodeoxyribonuclease III [Vibrio cholerae AM-19226] gi|150423208|gb|EDN15155.1| exodeoxyribonuclease III [Vibrio cholerae AM-19226] Length = 268 Score = 201 bits (512), Expect = 6e-50, Method: Composition-based stats. Identities = 78/268 (29%), Positives = 127/268 (47%), Gaps = 9/268 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V ++N+N +RAR+H L A I ++ PD+I LQE K D+ FP + ++++ Y + GQK Sbjct: 1 MKVISFNINGLRARLHQLQALIDKHQPDVIGLQEIKVHDEAFPRQEVEAMGYQVYFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 ++ GVAIL K P+E++ P ++ + + N Q I N Y P G+ + Sbjct: 61 AHYGVAILCKQTPVEVIKGFPTDNEEHQKRMIMATFADQNGQKTTILNGYFPQGDNVEHK 120 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175 K+ K + + + + + E L+ GD NI P + F Sbjct: 121 TKFPYKRQFYRDLMTYLREHRSNSERLVVMGDINISPLDLDIGIGEANRKRWLQTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R+ Q L + G D R H +S++DY + + N+G+RID I+ +P Sbjct: 181 QPEEREWLQTLLDWGLVDTFRQLHPDVSDQFSWFDYRSRGFEDNRGLRIDVILATPTLAE 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 A ID + R KPSDH P+ + Sbjct: 241 TCQEAGIDYELRAIDKPSDHAPIWATFK 268 >gi|153825215|ref|ZP_01977882.1| exodeoxyribonuclease III [Vibrio cholerae MZO-2] gi|153830542|ref|ZP_01983209.1| exodeoxyribonuclease III [Vibrio cholerae 623-39] gi|229523879|ref|ZP_04413284.1| exodeoxyribonuclease III [Vibrio cholerae bv. albensis VL426] gi|229529117|ref|ZP_04418507.1| exodeoxyribonuclease III [Vibrio cholerae 12129(1)] gi|297579378|ref|ZP_06941306.1| exodeoxyribonuclease III [Vibrio cholerae RC385] gi|148873972|gb|EDL72107.1| exodeoxyribonuclease III [Vibrio cholerae 623-39] gi|149741194|gb|EDM55245.1| exodeoxyribonuclease III [Vibrio cholerae MZO-2] gi|229332891|gb|EEN98377.1| exodeoxyribonuclease III [Vibrio cholerae 12129(1)] gi|229337460|gb|EEO02477.1| exodeoxyribonuclease III [Vibrio cholerae bv. albensis VL426] gi|297536972|gb|EFH75805.1| exodeoxyribonuclease III [Vibrio cholerae RC385] gi|327484412|gb|AEA78819.1| Exodeoxyribonuclease III [Vibrio cholerae LMA3894-4] Length = 268 Score = 201 bits (512), Expect = 6e-50, Method: Composition-based stats. Identities = 79/268 (29%), Positives = 128/268 (47%), Gaps = 9/268 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V ++N+N +RAR+H L A I ++ PD+I LQE K D+ FP + ++++ Y + GQK Sbjct: 1 MKVISFNINGLRARLHQLQALIDKHQPDVIGLQEIKVHDEAFPRQEVEAMGYQVYFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121 ++ GVAIL K P+E++ P ++ + + N Q I N Y P G+ + Sbjct: 61 AHYGVAILCKQTPVEVIKGFPTDNEEHQKRMIMATFADQNGQKTTILNGYFPQGDNVEHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175 TK+ K + + + + + E L+ GD NI P + F Sbjct: 121 TKFPYKRQFYRDLMTYLREHRSNSERLVVMGDINISPLDLDIGIGEANRKRWLQTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R+ Q L + G D R H +S++DY + + N+G+RID I+ +P Sbjct: 181 QPEEREWLQTLLDWGLVDTFRQLHPDVSDQFSWFDYRSRGFEDNRGLRIDVILATPTLAE 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 A ID + R KPSDH P+ + Sbjct: 241 TCQEAGIDYELRAIDKPSDHAPIWATFK 268 >gi|296313346|ref|ZP_06863287.1| exodeoxyribonuclease III [Neisseria polysaccharea ATCC 43768] gi|296840163|gb|EFH24101.1| exodeoxyribonuclease III [Neisseria polysaccharea ATCC 43768] Length = 256 Score = 201 bits (512), Expect = 6e-50, Method: Composition-based stats. Identities = 90/260 (34%), Positives = 135/260 (51%), Gaps = 4/260 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + TWNVNS+ R+ + + +N PDI+ LQE K + FP LQ + +H GQK Sbjct: 1 MKITTWNVNSLNVRLPQVQNLLADNPPDILVLQELKLDQDKFPAAALQMMGWHCVWSGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAI+S+ P ++ LP D Q R I AT +R+ N+Y +G + S K Sbjct: 61 TYNGVAIISRSVPQDVHFGLPSLPDDPQRRVIAATVGG----VRVINVYCVNGEALDSPK 116 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K W F + L+ GD+NI P DCY+P W + RQ F Sbjct: 117 FKYKEQWFAALTEFVRDEMTRYGKLVLLGDFNIAPADADCYDPEKWYEKIHCSSVERQWF 176 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q L ++G TD++R H Y+++DY + + G+RIDHI+++ E ++L R+D Sbjct: 177 QNLLDLGLTDSLRQVHPEGAFYTWFDYRGAMFQRKLGLRIDHILVTSEMAAVLKDVRVDL 236 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 R +PSDH PV D+ Sbjct: 237 DTRALERPSDHAPVAAEFDL 256 >gi|71898520|ref|ZP_00680691.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Xylella fastidiosa Ann-1] gi|182681462|ref|YP_001829622.1| exodeoxyribonuclease III Xth [Xylella fastidiosa M23] gi|71731644|gb|EAO33704.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Xylella fastidiosa Ann-1] gi|182631572|gb|ACB92348.1| exodeoxyribonuclease III Xth [Xylella fastidiosa M23] gi|307579913|gb|ADN63882.1| exodeoxyribonuclease III Xth [Xylella fastidiosa subsp. fastidiosa GB514] Length = 264 Score = 201 bits (512), Expect = 6e-50, Method: Composition-based stats. Identities = 86/261 (32%), Positives = 136/261 (52%), Gaps = 6/261 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A+WNVNS+ R+ L W+ E PD++ LQETK ED FP L +L Y GQK Sbjct: 3 MRIASWNVNSLNVRLSQLQQWLVEAAPDVLGLQETKLEDHQFPEAALAALGYVSVYAGQK 62 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVA+L++ ++ +P +R+ NLY+ +G + + K Sbjct: 63 TYNGVALLARVALEDVQVGIP-----EFEDVQRRVIAATVDGIRVVNLYVVNGQEVGTDK 117 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+SW+ + ++ L+ L+ GD+NI P D Y+P +W D T ++ Sbjct: 118 YAYKLSWLDAVYHWLAEELQRYPRLVVLGDFNIAPDARDVYDPQVWNEDHILTSTTERAA 177 Query: 184 -QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 KL +G D R H ++S+WDY S+ +N+G+RID ++S + ++ ID Sbjct: 178 LDKLLGLGLHDGFRLHHQDAGIFSWWDYRQASFRRNRGLRIDLTLVSEALRAQAVASGID 237 Query: 243 TKPRGWTKPSDHTPVIVSLDI 263 PRGW +PSDH P + L + Sbjct: 238 RVPRGWERPSDHAPAWIELAL 258 >gi|332036974|gb|EGI73433.1| exodeoxyribonuclease III [Pseudoalteromonas haloplanktis ANT/505] Length = 268 Score = 201 bits (512), Expect = 6e-50, Method: Composition-based stats. Identities = 79/268 (29%), Positives = 124/268 (46%), Gaps = 9/268 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V ++N+N +RAR+H L A I ++ PD+I LQE K D+ FP E +Q + YH+ GQK Sbjct: 1 MKVISFNINGLRARLHQLQAIIDKHQPDVIGLQEIKVHDEAFPLEDVQKMGYHVYFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHL-PGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121 ++ GVA+L K +P ++ + + N + L + N Y P G+ I Sbjct: 61 AHYGVAMLCKKEPKSVLKGFATDTEESQKRMISVTVEQDNGRDLTVMNGYFPQGDNINHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175 TK+ K + K + + +I GD NI P D + F Sbjct: 121 TKFPYKRQFYKDLMTHLETNHTPVQDVIVMGDINISPTDLDIGIGEVNAKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 R+ L N GF D R + YS++DY + + N+G+RID ++ + E + Sbjct: 181 QPVEREWLATLLNWGFKDTFREQNPETDDQYSWFDYRSKGFVDNRGLRIDVVLATNELAA 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 ID + RG KPSDH P+ + Sbjct: 241 RCIDTGIDYELRGIEKPSDHAPIWSTFK 268 >gi|118580060|ref|YP_901310.1| exonuclease III [Pelobacter propionicus DSM 2379] gi|118502770|gb|ABK99252.1| Exodeoxyribonuclease III [Pelobacter propionicus DSM 2379] Length = 270 Score = 201 bits (512), Expect = 7e-50, Method: Composition-based stats. Identities = 89/270 (32%), Positives = 135/270 (50%), Gaps = 11/270 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++NVN +R+R+H L A I P+II LQETK D+ FP + +QSL YH+ GQK Sbjct: 1 MKIVSFNVNGLRSRLHQLEALINAQRPEIIALQETKVRDEEFPVDAVQSLGYHVVFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI-NTQTLRIGNLYLPHGNPITS- 121 ++ GVA+LS+ ++ LPGD + Q RFI AT + + +R+ N Y P G Sbjct: 61 THYGVALLSRLPLQDVQLGLPGDGDEAQKRFIAATIPLSDGTPVRVINGYFPQGENRDHA 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE------NDACF 175 K+ K + L + PL+ GD+N+ P+ D CF Sbjct: 121 VKFPAKQRFYAELLGHLQGECDPATPLVVLGDFNVAPRDMDLGIGTDNVKRWLKSGKCCF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSW--SKNKGIRIDHIMLSPEA 232 E R F+ L G D+ R + +S++DY + + +G+RIDHI+L+ Sbjct: 181 LPEERLWFECLIEWGLHDSFRELNPAVADRFSWFDYRSRGFEGEPKRGLRIDHILLTRSL 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + +A ID R KPSDH PV V ++ Sbjct: 241 LARCRAAGIDYDIRSMAKPSDHCPVWVEIE 270 >gi|238919557|ref|YP_002933072.1| exodeoxyribonuclease III, putative [Edwardsiella ictaluri 93-146] gi|238869126|gb|ACR68837.1| exodeoxyribonuclease III, putative [Edwardsiella ictaluri 93-146] Length = 269 Score = 201 bits (512), Expect = 7e-50, Method: Composition-based stats. Identities = 80/269 (29%), Positives = 124/269 (46%), Gaps = 8/269 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H LAA +++++PD+I LQETK D FP + L L Y + GQK Sbjct: 1 MKFISFNINGLRARPHQLAAIVEKHSPDVIGLQETKVHDDMFPLQDLAHLGYQLHYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 + GVA+L++ P+ + PGDD + Q R I A TL + N Y P G Sbjct: 61 GHYGVALLTRMAPLAVRKGFPGDDAEAQRRVIMADIPTELGTLTVINGYFPQGESRDHPI 120 Query: 124 -YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC------YNPIIWENDACFT 176 + K + R+ L + P++ GD NI P+ D + F Sbjct: 121 KFPAKSKFYADLQRYLQDSLTPQNPVLIMGDMNISPRDIDIGIGDESRRRWLRSGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +L G D R + +S++DY + + N+G+RID ++ S Sbjct: 181 PEEREWLDRLLAWGLVDTYRQANPQGDDHFSWFDYRSKGFDDNRGLRIDLLLASQPLAQR 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 ID + R KPSDH P+ + Sbjct: 241 CTDTGIDYEIRAMEKPSDHAPIWAEFALS 269 >gi|114047018|ref|YP_737568.1| exonuclease III [Shewanella sp. MR-7] gi|113888460|gb|ABI42511.1| Exodeoxyribonuclease III [Shewanella sp. MR-7] Length = 270 Score = 201 bits (512), Expect = 7e-50, Method: Composition-based stats. Identities = 86/268 (32%), Positives = 131/268 (48%), Gaps = 9/268 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +R+R+H L A I + PDII LQETK D+ FP ++++ YH+ G K Sbjct: 1 MKIVSFNINGLRSRLHQLQALIDSHQPDIIGLQETKVHDEAFPLAEVEAMGYHVHYHGGK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122 ++ GVA+LSK PI++ D+ D Q R I TF N + L + N Y P G I Sbjct: 61 AHYGVAMLSKAAPIKVQKGFATDEEDAQRRMIIGTFAQANGRPLTVLNGYFPQGESIDHP 120 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175 KY K + + + +E + GD NI P D + F Sbjct: 121 TKYPAKRKFYQDLMAHLHANHSNDEDIAIIGDINISPIDLDIGIGEVNRKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R+ + LQ+ G D R H YS++DY + + N+G+RID I+ +P + Sbjct: 181 QPEEREWLKTLQDWGLVDTFRQLHPDRSERYSWFDYRSKGFDDNRGLRIDVILATPSLAA 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 L + +D RG KPSDH P+ + Sbjct: 241 RLIESDVDYDLRGIDKPSDHAPIWSTFK 268 >gi|317048409|ref|YP_004116057.1| exodeoxyribonuclease III [Pantoea sp. At-9b] gi|316950026|gb|ADU69501.1| exodeoxyribonuclease III [Pantoea sp. At-9b] Length = 268 Score = 201 bits (512), Expect = 7e-50, Method: Composition-based stats. Identities = 79/268 (29%), Positives = 127/268 (47%), Gaps = 8/268 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A ++++ PD+I LQETK D FP E + L YH+ GQK Sbjct: 1 MKFVSFNINGLRARPHQLEALVEQHQPDVIGLQETKVHDDMFPLEEVSKLGYHVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 + GVA+L+K +P+ + P D D Q R I A + + N Y P G Sbjct: 61 GHYGVALLTKAEPVAVHRGFPSDGEDAQRRLIMAEIPSPIGDITVINGYFPQGESRDHPI 120 Query: 124 -YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 + K + + + +L +++P++ GD NI + + F Sbjct: 121 KFPAKEKFYQDLQSYLQTQLAVDKPVLIMGDMNISSTDLDIGIGEENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +L N G D RA + +S++DY + + N+G+RID ++ S S Sbjct: 181 PEEREWMDRLLNWGLVDTWRAQYPETADRFSWFDYRSKGFDDNRGLRIDLLLASQPLASR 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 ++ ID R KPSDH PV + + Sbjct: 241 CIASGIDYDIRSMEKPSDHAPVWSTFKL 268 >gi|260779121|ref|ZP_05888013.1| exodeoxyribonuclease III [Vibrio coralliilyticus ATCC BAA-450] gi|260605285|gb|EEX31580.1| exodeoxyribonuclease III [Vibrio coralliilyticus ATCC BAA-450] Length = 268 Score = 201 bits (512), Expect = 7e-50, Method: Composition-based stats. Identities = 79/268 (29%), Positives = 133/268 (49%), Gaps = 9/268 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V ++N+N +RAR+H L A I ++ PD+I LQE K D+ FP E ++++ Y + GQK Sbjct: 1 MKVISFNINGLRARLHQLQAVIDKHQPDVIGLQEIKVHDEAFPIEDVEAMGYKVYFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121 ++ GVA+L K +P+ + P ++ + + N + + + N Y P G+ I+ Sbjct: 61 AHYGVAMLCKKEPLSVQKGFPTDNEDHQKRMIMATFEDDNGEKVTVLNGYFPQGDNISHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175 TKY K + K + + + +E LI GD NI P + F Sbjct: 121 TKYPYKRQFYKDLMTYLNDHHNNDEQLIVMGDINISPIDADIGIGEPNRKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R+ + L + GF D R H +S++DY + + N+G+RID ++ +P+ Sbjct: 181 QPEEREWLKTLMDWGFVDTFRQLHPEVEDRFSWFDYRSRGFDDNRGLRIDVVLATPKLAE 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + ID + RG KPSDH P+ + Sbjct: 241 KCIESDIDYELRGIEKPSDHAPIWSTFK 268 >gi|148548014|ref|YP_001268116.1| exonuclease III [Pseudomonas putida F1] gi|148512072|gb|ABQ78932.1| Exodeoxyribonuclease III [Pseudomonas putida F1] Length = 270 Score = 201 bits (512), Expect = 7e-50, Method: Composition-based stats. Identities = 86/269 (31%), Positives = 132/269 (49%), Gaps = 11/269 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + +N+N +RAR H LAA I+++ PD+I LQETK D FP +Q+L YH+ GQK Sbjct: 1 MKIVCFNINGLRARPHQLAALIEKHQPDVIGLQETKVSDDQFPLADVQALGYHVHYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122 + GVA+LS+ P+ + D+ D Q RFI TF N + I N Y P G Sbjct: 61 GHYGVALLSRQAPLSLHKGFATDEEDAQRRFIWGTFADANGSPITIMNGYFPQGESRDHP 120 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175 K+ K + + ++P++ GD NI PQ D + F Sbjct: 121 TKFPAKQRFYSDLQALLESQFRNDQPVLVMGDMNISPQDCDIGIGPDNAKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232 E R+ ++L+ G D+ R + +S++DY + + +G+RID IM S Sbjct: 181 LPEEREWMERLKGWGLVDSFRHLYPEVTDRFSWFDYRSRGFEDEPKRGLRIDLIMASQPL 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + +A +D + RG KPSDH P+ + L Sbjct: 241 VPRIKAAGVDYELRGMEKPSDHAPIWLEL 269 >gi|71275821|ref|ZP_00652105.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Xylella fastidiosa Dixon] gi|71902300|ref|ZP_00684290.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Xylella fastidiosa Ann-1] gi|170730198|ref|YP_001775631.1| exodeoxyribonuclease III [Xylella fastidiosa M12] gi|71163399|gb|EAO13117.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Xylella fastidiosa Dixon] gi|71727953|gb|EAO30176.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Xylella fastidiosa Ann-1] gi|167964991|gb|ACA12001.1| exodeoxyribonuclease III [Xylella fastidiosa M12] Length = 264 Score = 201 bits (512), Expect = 7e-50, Method: Composition-based stats. Identities = 86/261 (32%), Positives = 138/261 (52%), Gaps = 6/261 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A+WNVNS+ R+ L W+ E PD++ LQETK ED FP L +L Y GQK Sbjct: 3 MRIASWNVNSLNVRLSQLQQWLVEAAPDVLGLQETKLEDHQFPGAALAALGYVSVYAGQK 62 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVA+L++ ++ +P + + +R+ NLY+ +G + + K Sbjct: 63 TYNGVALLARVALEDVQVGIPEFEDVQRRVIAATVDG-----IRVVNLYVVNGQEVGTEK 117 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+SW+ + ++ L+ L+ GD+NI P D Y+P +W D T ++ Sbjct: 118 YAYKLSWLDAVYHWLAEELQRYPRLVVLGDFNIAPDARDVYDPQVWNEDHILTSTTERAA 177 Query: 184 -QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 KL +G D R H ++S+WDY S+ +N+G+RID ++S + ++ ID Sbjct: 178 LDKLLGLGLHDGFRLHHQDAGIFSWWDYRQASFRRNRGLRIDLTLVSEALRAQAVASGID 237 Query: 243 TKPRGWTKPSDHTPVIVSLDI 263 PRGW +PSDH P + L + Sbjct: 238 RVPRGWERPSDHAPAWIELAL 258 >gi|300742521|ref|ZP_07072542.1| exodeoxyribonuclease III [Rothia dentocariosa M567] gi|300381706|gb|EFJ78268.1| exodeoxyribonuclease III [Rothia dentocariosa M567] Length = 278 Score = 201 bits (512), Expect = 7e-50, Method: Composition-based stats. Identities = 76/265 (28%), Positives = 123/265 (46%), Gaps = 7/265 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSIRAR + W+ + D++ LQETKT+D+ FPFE + L Y + G Sbjct: 12 MKIATWNVNSIRARADRIEDWLDKTEVDVLALQETKTKDETFPFELFEFLGYEVAHYGLN 71 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLD----VQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +NGVAI S+ + P A +RI +LY+P+G + Sbjct: 72 QWNGVAIASRVGLDSVERTFPNQPAFGKPGDPAEVEARAIGATCNGVRIWSLYVPNGRGL 131 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEE--PLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 T K+ W+++ + L + GD+N+ P+ D ++ + + + Sbjct: 132 TDPHMAYKMEWMRQLRTNVNGWLHADPAAQFALVGDWNVAPEDTDVWDIDFFRENDLTHV 191 Query: 178 EVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 + + I Y++WDY A +SKN+G+RID + SP + + Sbjct: 192 SAPEREAFYALLNDEGLIDPVRPYTQGEYTYWDYQAGRFSKNEGMRIDFQLCSPALAARV 251 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSL 261 +A ID + R SDHTPV++ L Sbjct: 252 ENAWIDREEREGDGASDHTPVVIEL 276 >gi|261391913|emb|CAX49373.1| exodeoxyribonuclease III (exonuclease III; EXO III) [Neisseria meningitidis 8013] Length = 256 Score = 201 bits (512), Expect = 7e-50, Method: Composition-based stats. Identities = 90/260 (34%), Positives = 133/260 (51%), Gaps = 4/260 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + TWNVNS+ R+ + + +N PDI+ LQE K + FP LQ + +H GQK Sbjct: 1 MKITTWNVNSLNVRLPQVQNLLADNPPDILVLQELKLDQDKFPAAALQMMGWHCVWSGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAI+S+ P ++ LP D Q R I AT +R+ N+Y +G + S K Sbjct: 61 TYNGVAIVSRNAPEDVHIGLPALPDDPQRRVIAATVGG----VRVINVYCVNGEALDSPK 116 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K W F + L+ GD+NI P DCY+P W + RQ F Sbjct: 117 FKYKEQWFAALTEFVRDEMTRYGKLVLLGDFNIAPADADCYDPEKWHEKIHCSSVERQWF 176 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + L ++G TD++R H Y+++DY + + G+RIDHI++SP L R+D Sbjct: 177 KNLLDLGLTDSLRQVHPEGAFYTWFDYRGAMFQRKLGLRIDHILVSPAMVEALKDVRVDL 236 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 + R +PSDH PV D Sbjct: 237 ETRALERPSDHAPVAAEFDW 256 >gi|188533711|ref|YP_001907508.1| Exodeoxyribonuclease III [Erwinia tasmaniensis Et1/99] gi|188028753|emb|CAO96615.1| Exodeoxyribonuclease III [Erwinia tasmaniensis Et1/99] Length = 268 Score = 201 bits (512), Expect = 8e-50, Method: Composition-based stats. Identities = 83/268 (30%), Positives = 127/268 (47%), Gaps = 8/268 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A ++++ PD+I LQETK D FP E + SL YH+ GQK Sbjct: 1 MKFVSFNINGLRARPHQLQAIVEQHQPDVIGLQETKVHDDMFPLEEVASLGYHVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122 + GVA+L K QPI + GDD D Q R I A + + + N Y P G Sbjct: 61 GHYGVAMLCKQQPIAVRRGFEGDDEDAQRRIIMADIPTSDGVITVLNGYFPQGESRDHPT 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACFT 176 K+ K + + + Q+ + + ++ GD NI D + F Sbjct: 121 KFPAKEKFYRDLQSYLEQQQKADNQVVIMGDMNISSSDLDIGIGEVNRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +L N G D RA + + + +S++DY + + N+G+RID I+ S Sbjct: 181 PEEREWMDRLMNWGLVDTWRAQNAEVNDRFSWFDYRSKGFDDNRGLRIDLILASRPLAGR 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + ID R KPSDH P+ + Sbjct: 241 CVATGIDYDIRAMEKPSDHAPIWAQFSL 268 >gi|120554411|ref|YP_958762.1| exodeoxyribonuclease III [Marinobacter aquaeolei VT8] gi|120324260|gb|ABM18575.1| Exodeoxyribonuclease III [Marinobacter aquaeolei VT8] Length = 270 Score = 201 bits (512), Expect = 8e-50, Method: Composition-based stats. Identities = 87/271 (32%), Positives = 137/271 (50%), Gaps = 11/271 (4%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 ++ ++NVNSIR R+H L A I++ NPD+I LQETK D+ FP E ++ L YH+ GQ Sbjct: 1 MM-FVSFNVNSIRTRLHQLEAVIQQLNPDVIGLQETKVTDEEFPVEAIRELGYHVHFHGQ 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K++ GVA+LS+ +P +++ P D D Q R I FT+N + L + N Y P G Sbjct: 60 KTHYGVALLSRAKPEQVIKGYPSDGEDSQRRLITGHFTVNGEPLTVINGYFPQGESRDHP 119 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175 K+ K + + + + + ++ GD NI P D + F Sbjct: 120 VKFPAKEKFYADLMAYLDELTKKPGHILVMGDMNISPTDRDIGIGADNAKRWLRSGKCSF 179 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKN--KGIRIDHIMLSPEA 232 E R+ +++ GFTD R H + +S++DY + + ++ +G+RID IM S Sbjct: 180 LPEEREWLGQVEQRGFTDVFRHLHPDEANTFSWFDYRSKGFERDPRRGLRIDLIMASDSL 239 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +A + R +PSDH PV S D+ Sbjct: 240 LPKAKAAGVSYDIRAMERPSDHCPVWASFDL 270 >gi|256833636|ref|YP_003162363.1| exodeoxyribonuclease III Xth [Jonesia denitrificans DSM 20603] gi|256687167|gb|ACV10060.1| exodeoxyribonuclease III Xth [Jonesia denitrificans DSM 20603] Length = 264 Score = 201 bits (511), Expect = 8e-50, Method: Composition-based stats. Identities = 75/261 (28%), Positives = 127/261 (48%), Gaps = 4/261 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A+WN+NSIRAR A ++ ++ D++ LQETK +D+ FP + Y + G Sbjct: 1 MRLASWNINSIRARTDRALAVLERHDIDVLALQETKCKDEQFPVAAFEEAGYEVAHVGVN 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ-TLRIGNLYLPHGNPITST 122 +NGVA++S+ ++ PG + +EA +R+ +LY+P+G I Sbjct: 61 QWNGVALISRVGLDDVHRAFPGQPGFGEDPVVEARAVGAICGGVRVWSLYVPNGREIDHP 120 Query: 123 KYDDKISWIKRFLRFASQRLELEE--PLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 Y K+ W+ + A Q + + GD+N+ P+ D ++ +E T R Sbjct: 121 HYHYKLQWLHQLKNSAQQWTADDPAAQVALVGDWNVAPRDTDVWDREFFEGKTHVTDPER 180 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 +F ++G+T+ R +Y++WDY + KN+G+RID SP T + Sbjct: 181 AAFAAFGDIGYTEVSRVHVP-EDVYTYWDYQQLRFPKNQGMRIDFAWCSPALTKRVTGVE 239 Query: 241 IDTKPRGWTKPSDHTPVIVSL 261 ID R SDH PVI+ + Sbjct: 240 IDRNERKGKGASDHVPVILDI 260 >gi|119961356|ref|YP_946272.1| exodeoxyribonuclease III [Arthrobacter aurescens TC1] gi|119948215|gb|ABM07126.1| exodeoxyribonuclease III [Arthrobacter aurescens TC1] Length = 268 Score = 201 bits (511), Expect = 8e-50, Method: Composition-based stats. Identities = 79/266 (29%), Positives = 127/266 (47%), Gaps = 8/266 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+RAR + AW++ ++ D++ +QETK +D+NFP+E + + Y + G Sbjct: 1 MKIATWNVNSLRARADRVEAWLERSDCDVLAIQETKCKDENFPWELFERMGYEVAHFGVN 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLD----VQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +NGVAI S+ ++ +RI +LY+P+G + Sbjct: 61 QWNGVAIASRVGLDDVQRTFLDQPAFGKAGKDPAQEARAIAATCGGIRIWSLYVPNGRSL 120 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEE--PLIFAGDYNIIPQPHDCYNP--IIWENDACF 175 KI W+ A++ ++ E + GD+NI P D ++ N Sbjct: 121 DDEHMPYKIKWLDVLQGHAAEWVKSEPTAQIALMGDWNIAPFDDDVWDIELFRNNNYTHV 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 + R +F + GFTD +R +Y++WDY + K +G+RID + SP S Sbjct: 181 SEPERAAFHAFETAGFTDVVRPYTPGPGVYTYWDYTQLRFPKKEGMRIDFCLASPALASR 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 + A ID + R SDH PVIV L Sbjct: 241 VTGASIDREERKGKGASDHAPVIVEL 266 >gi|323494946|ref|ZP_08100037.1| exonuclease III [Vibrio brasiliensis LMG 20546] gi|323310741|gb|EGA63914.1| exonuclease III [Vibrio brasiliensis LMG 20546] Length = 268 Score = 201 bits (511), Expect = 8e-50, Method: Composition-based stats. Identities = 79/268 (29%), Positives = 132/268 (49%), Gaps = 9/268 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V ++N+N +RAR+H L A I ++ PD+I LQE K D+ FP E ++++ Y + GQK Sbjct: 1 MKVISFNINGLRARLHQLQAVIDKHQPDVIGLQEIKVHDEAFPLEDVEAMGYKVYFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121 ++ GVA+L K +PI + P ++ + + N + + I N Y P G+ I Sbjct: 61 AHYGVAMLCKKEPISVQKGFPTDNEDHQKRMIMVTVEDDNGEKVTILNGYFPQGDNINHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175 TK+ K + + + + +E LI GD NI P + F Sbjct: 121 TKFPYKRQFYSDLMTYLNDHHTNDEQLIVMGDINISPIDADIGIGEPNRKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E RQ + L + GF D R H + +S++DY + + N+G+RID ++ +P+ Sbjct: 181 QPEERQWLKTLLDWGFVDTFRQIHPDVNDRFSWFDYRSKGFPDNRGLRIDVVLATPKLAE 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + +D + RG KPSDH P+ + Sbjct: 241 KCIESDVDYELRGIEKPSDHAPIWSTFK 268 >gi|191171643|ref|ZP_03033190.1| exodeoxyribonuclease III [Escherichia coli F11] gi|190907973|gb|EDV67565.1| exodeoxyribonuclease III [Escherichia coli F11] Length = 268 Score = 201 bits (511), Expect = 8e-50, Method: Composition-based stats. Identities = 79/266 (29%), Positives = 124/266 (46%), Gaps = 8/266 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A ++++ PD+I LQETK D FP E + L Y++ GQK Sbjct: 1 MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDVMFPLEEVAKLGYNVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 + GVA+L+K PI + PGDD + Q R I A + + N Y P G Sbjct: 61 GHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSPLGNVTVINGYFPQGESRDHPI 120 Query: 124 -YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 + K + + + L+ E P++ GD NI P + + F Sbjct: 121 KFPAKAQFYQNLQNYLETELKRENPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ ++L + G D R + +S++DY + + N+G+RID ++ S Sbjct: 181 PEEREWMERLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAEC 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 ID + R KPSDH PV + Sbjct: 241 CVETGIDYEIRSMEKPSDHAPVWATF 266 >gi|157374807|ref|YP_001473407.1| exonuclease III [Shewanella sediminis HAW-EB3] gi|157317181|gb|ABV36279.1| exodeoxyribonuclease III [Shewanella sediminis HAW-EB3] Length = 268 Score = 201 bits (511), Expect = 8e-50, Method: Composition-based stats. Identities = 86/268 (32%), Positives = 135/268 (50%), Gaps = 9/268 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N IRAR+H L A I + PD+I LQETK D FP ++++ Y + G K Sbjct: 1 MKIVSFNINGIRARLHQLQALIDSHQPDVIGLQETKAHDDVFPVADVEAMGYKVHYHGGK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI-NTQTLRIGNLYLPHGNPITS- 121 ++ GVA+LSK +P+++ P DD + Q R I TFT N + L I N Y P G+ I+ Sbjct: 61 AHYGVAMLSKLEPVKVQKGFPTDDDEAQRRMIMGTFTQENGRPLTILNGYFPQGDNISHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175 TKY K + K + + ++ +E + GD NI P + F Sbjct: 121 TKYPAKRKFYKDLMVYLNEHHTPDEDIAIIGDINISPVDLDIGIGAPNAKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R+ + L + G D R H YS++DY + + N+G+RID ++ + Sbjct: 181 QPEEREWLKTLMDWGLVDTFRELHPERSERYSWFDYRSKGFVDNRGLRIDVVLATKSLAE 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 L + +D + RG KPSDH P+ + Sbjct: 241 RLVESDVDYELRGIEKPSDHAPIWSTFK 268 >gi|229515240|ref|ZP_04404700.1| exodeoxyribonuclease III [Vibrio cholerae TMA 21] gi|229520320|ref|ZP_04409746.1| exodeoxyribonuclease III [Vibrio cholerae TM 11079-80] gi|229342686|gb|EEO07678.1| exodeoxyribonuclease III [Vibrio cholerae TM 11079-80] gi|229347945|gb|EEO12904.1| exodeoxyribonuclease III [Vibrio cholerae TMA 21] Length = 268 Score = 201 bits (511), Expect = 8e-50, Method: Composition-based stats. Identities = 79/268 (29%), Positives = 128/268 (47%), Gaps = 9/268 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V ++N+N +RAR+H L A I ++ PD+I LQE K D+ FP + ++++ Y + GQK Sbjct: 1 MKVISFNINGLRARLHQLQALIDKHQPDVIGLQEIKVHDEAFPRQEVEAMGYQVYFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121 ++ GVAIL K P+E++ P ++ + + N Q I N Y P G+ + Sbjct: 61 AHYGVAILCKQTPVEVIKGFPTDNEEHQKRMIMATFADQNGQKTTILNGYFPQGDNVEHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175 TK+ K + + + + + E L+ GD NI P + F Sbjct: 121 TKFPYKRQFYRDLMTYLCEHRSNSERLVVMGDINISPLDLDIGIGEANRKRWLQTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R+ Q L + G D R H +S++DY + + N+G+RID I+ +P Sbjct: 181 QPEEREWLQTLLDWGLVDTFRQLHPDVSDQFSWFDYRSRGFEDNRGLRIDVILATPTLAE 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 A ID + R KPSDH P+ + Sbjct: 241 TCQEAGIDYELRAIDKPSDHAPIWATFK 268 >gi|312172585|emb|CBX80841.1| Exonuclease III [Erwinia amylovora ATCC BAA-2158] Length = 301 Score = 201 bits (511), Expect = 8e-50, Method: Composition-based stats. Identities = 82/266 (30%), Positives = 124/266 (46%), Gaps = 8/266 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A ++++ PD+I LQETK D FP + SL YH+ GQK Sbjct: 34 MKFVSFNINGLRARPHQLQAIVEQHQPDVIGLQETKVHDDMFPLAEVASLGYHVFYHGQK 93 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122 + GVA+L K QP+ + DD D Q R I A ++ L + N Y P G Sbjct: 94 GHYGVALLCKQQPVAVRRGFASDDEDAQRRIIMADIMTHSGLLTVINGYFPQGESRDHPT 153 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + + + Q+ + + L+ GD NI + + F Sbjct: 154 KFPAKEKFYRDLHSYLEQQQKPDNQLLIMGDMNISSGDLDIGIGEENRKRWLRTGKCSFL 213 Query: 177 LEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ KL N G D RA H + +S++DY + + N+G+RID ++ S Sbjct: 214 PEEREWMDKLMNWGLVDTWRAQHATINDRFSWFDYRSKGFDDNRGLRIDLVLASRPLADR 273 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 + ID R KPSDH P+ Sbjct: 274 CVATGIDYDIRAMEKPSDHAPIWAEF 299 >gi|110805445|ref|YP_688965.1| exonuclease III [Shigella flexneri 5 str. 8401] gi|110614993|gb|ABF03660.1| exonuclease III [Shigella flexneri 5 str. 8401] Length = 268 Score = 201 bits (511), Expect = 8e-50, Method: Composition-based stats. Identities = 78/266 (29%), Positives = 123/266 (46%), Gaps = 8/266 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A ++++ PD+I LQETK D FP E + L Y++ GQK Sbjct: 1 MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNMFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 + GVA+L+K PI + PGDD + Q R I A + + N Y P G Sbjct: 61 GHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSLLGNVTVINGYFPQGESRDHPI 120 Query: 124 -YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 + K + + + L+ + P++ GD NI P + + F Sbjct: 121 KFPAKAQFYQNLQNYLETELKRDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +L + G D R + +S++DY + + N+G+RID ++ S Sbjct: 181 PEEREWMDRLMSWGVVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAEC 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 ID + R KPSDH PV + Sbjct: 241 CVETGIDYEIRSMEKPSDHAPVWATF 266 >gi|15838527|ref|NP_299215.1| exodeoxyribonuclease III [Xylella fastidiosa 9a5c] gi|9107031|gb|AAF84735.1|AE004013_1 exodeoxyribonuclease III [Xylella fastidiosa 9a5c] Length = 264 Score = 201 bits (511), Expect = 9e-50, Method: Composition-based stats. Identities = 86/261 (32%), Positives = 139/261 (53%), Gaps = 6/261 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A+WNVNS+ R+ L W+ E PD++ LQETK ED FP L +L Y GQK Sbjct: 3 MRIASWNVNSLNVRLSQLQQWLVEAAPDVLGLQETKLEDHQFPEAALAALGYVSVYAGQK 62 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVA+L++ ++ +PG + + +R+ NLY+ +G + + K Sbjct: 63 TYNGVALLARVALEDVQVGIPGFEDVQRRVIAATVDG-----IRVVNLYVVNGQEVGTEK 117 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI-IWENDACFTLEVRQS 182 Y K+SW+ + ++ L+ L+ GD+NI P D Y+P E+ + R + Sbjct: 118 YAYKLSWLDAVYHWLAEELQRYPRLVVLGDFNIAPDARDVYDPQVWNEDHILTSTTERVA 177 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 KL +G D R H ++S+WDY S+ +N+G+RID ++S + + ++ ID Sbjct: 178 LGKLLGLGLHDGFRLHHQDTGIFSWWDYRQASFRRNRGLRIDLTLVSEALRAQVVASGID 237 Query: 243 TKPRGWTKPSDHTPVIVSLDI 263 PRGW +PSDH P + L + Sbjct: 238 CVPRGWERPSDHAPAWIELAL 258 >gi|206602794|gb|EDZ39275.1| Exodeoxyribonuclease III [Leptospirillum sp. Group II '5-way CG'] Length = 265 Score = 201 bits (511), Expect = 9e-50, Method: Composition-based stats. Identities = 79/257 (30%), Positives = 129/257 (50%), Gaps = 5/257 (1%) Query: 7 ATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYN 66 TWNVNS++ R+ + W+ D++CLQETK D FPF+ + + Y GQ +YN Sbjct: 14 TTWNVNSLKVRLPQVLDWLVREKADVVCLQETKLPDAQFPFQAFREIGYDAVWSGQPTYN 73 Query: 67 GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDD 126 GVAILS + D + +RI N+Y+P+G + S K+ Sbjct: 74 GVAILSNTPIELTEASMDDHPDDHRRFLSARIRG-----VRIVNVYVPNGQDLDSPKFTY 128 Query: 127 KISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL 186 K+ W+ R R+ + E EP++ GD+NI+P D ++P +++ + R++ + Sbjct: 129 KLEWLNRLTRYIEKVREAREPVLLMGDFNIVPGDLDTWDPEGFKDQIFHSPPERKALGNI 188 Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR 246 GF+D R + +S+WDY S+ +N+G+RID I+ +P + ID + R Sbjct: 189 FQAGFSDLYRTLYPDRQEFSWWDYRMGSFHRNRGLRIDLILSTPPLSEQCREVFIDREAR 248 Query: 247 GWTKPSDHTPVIVSLDI 263 +PSDH PV + Sbjct: 249 KAERPSDHVPVTALFSL 265 >gi|149191818|ref|ZP_01870055.1| exonuclease III [Vibrio shilonii AK1] gi|148834336|gb|EDL51336.1| exonuclease III [Vibrio shilonii AK1] Length = 268 Score = 201 bits (511), Expect = 9e-50, Method: Composition-based stats. Identities = 78/267 (29%), Positives = 130/267 (48%), Gaps = 9/267 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V ++N+N +RAR+H L A I ++ PD+I LQE K D+ FP E ++++ Y + GQK Sbjct: 1 MKVISFNINGLRARLHQLQALIDKHQPDVIGLQEIKVHDEAFPVEAVEAMGYKVYFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121 ++ GVA+L K +PI + P ++ + + + + + N Y P G+ I+ Sbjct: 61 AHYGVAMLCKQEPISVQKGFPTDNEDHQKRMIMATFEDVKGDKVTVLNGYFPQGDNISHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175 TK+ K ++ K + + ++ +E LI GD NI P + F Sbjct: 121 TKFPYKEAFYKDLMTYLNEHHSNDEKLIVMGDINISPIDLDIGIGEPNRKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 R+ Q L + GF D R H +S++DY + + N+G+RID ++ + Sbjct: 181 QPIEREWLQTLLDWGFVDTFRQLHPNVDDQFSWFDYRSRGFDDNRGLRIDVVLATKSLAE 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261 A ID + RG KPSDH P+ Sbjct: 241 TCSEAGIDYELRGIEKPSDHAPIWSVF 267 >gi|186476236|ref|YP_001857706.1| exodeoxyribonuclease III Xth [Burkholderia phymatum STM815] gi|184192695|gb|ACC70660.1| exodeoxyribonuclease III Xth [Burkholderia phymatum STM815] Length = 258 Score = 201 bits (511), Expect = 9e-50, Method: Composition-based stats. Identities = 78/256 (30%), Positives = 125/256 (48%), Gaps = 1/256 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS++ R ++ W++ + D++CLQE K D+ FP L Y GQK Sbjct: 1 MKLATWNVNSLKVRQQHVIDWLELSRTDVLCLQELKLPDEKFPRAELAEKGYRSWFAGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGV IL + + + ++ + + +R+ Y P+G + K Sbjct: 61 TYNGVGILVRDG-VSVDEGSIVRNIPGFEDPQQRVIAATVEGVRVVCAYFPNGQAPGTDK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W+ + S L L GDYNI P+ D ++P WE + E R F Sbjct: 120 FAYKLRWLDAMYEWISSELTQHPKLALLGDYNIAPEDRDVHDPKAWEGQNLVSPEERAQF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +L +G D+ R +++WDY ++ +N G+RIDHI+LS + +D Sbjct: 180 NRLIELGLVDSFRLFDQPEKTFTWWDYRMLAFRRNAGLRIDHILLSKPLAASCTHCDVDK 239 Query: 244 KPRGWTKPSDHTPVIV 259 PR W +PSDH PV+ Sbjct: 240 TPRKWDQPSDHAPVVA 255 >gi|194289407|ref|YP_002005314.1| exodeoxyribonuclease iii [Cupriavidus taiwanensis LMG 19424] gi|193223242|emb|CAQ69247.1| EXODEOXYRIBONUCLEASE III [Cupriavidus taiwanensis LMG 19424] Length = 276 Score = 201 bits (511), Expect = 9e-50, Method: Composition-based stats. Identities = 82/263 (31%), Positives = 130/263 (49%), Gaps = 6/263 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENN-----PDIICLQETKTEDKNFPFETLQSLNYHIE 58 + +A+WNVNS++ R+ + W+ E D +CLQE K D +P L++ +H Sbjct: 12 LRIASWNVNSLKVRLPQVLQWLAEQEQAGAPIDALCLQELKLPDDKYPLAELENAGFHSI 71 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 GQK+YNGVAIL++ + + + + LR+ Y P+G Sbjct: 72 YTGQKTYNGVAILARDASMPGPVDVVRNIPGFEDAQQRVIAATYGD-LRLVCAYFPNGQS 130 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + S K+ K+ W++ + + + L GD+NI P+ D ++P WE + Sbjct: 131 LDSDKFAYKLQWLEAMTAWLREEMARHPRLALLGDFNIAPEDRDVHDPAKWEGQNLVSPP 190 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R +F L +G DA R +S+WDY ++ +N G+RIDHI+LSP + Sbjct: 191 ERAAFAALLELGLADAFRKFEQPEKAFSWWDYRMLAFRRNAGLRIDHILLSPALAEQCTA 250 Query: 239 ARIDTKPRGWTKPSDHTPVIVSL 261 ID PR W +PSDHTPV+ +L Sbjct: 251 CVIDRVPRTWEQPSDHTPVVATL 273 >gi|262381739|ref|ZP_06074877.1| exodeoxyribonuclease III [Bacteroides sp. 2_1_33B] gi|262296916|gb|EEY84846.1| exodeoxyribonuclease III [Bacteroides sp. 2_1_33B] Length = 253 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 82/262 (31%), Positives = 137/262 (52%), Gaps = 12/262 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60 + + T+N N +RA + L W+ + PD++C+QETK + FP ET ++L Y ++ + Sbjct: 1 MKIITYNTNGLRAAVGKGLPEWLAQEQPDVLCIQETKLQPDQFPSETFEALGYKSYLFSA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GVAIL+K +P I + + D + RF+ A F + I ++Y P G Sbjct: 61 QKKGYSGVAILTKQEPDHIEYGMGIEKYDNEGRFLRADFG----DVSIVSVYHPSG-TSG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + D K+ W++ F ++ + + LI GDYNI +P D ++PI ++ F E R Sbjct: 116 DERQDFKMIWLEDFQKYVVELQKSRPNLILCGDYNICHEPIDIHDPIRNAKNSGFLPEER 175 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + + + GFTD R + Y++W Y +S SKNKG RID+ M+S + +A Sbjct: 176 EWMTRFLSAGFTDTFRFLNPDKQEYTWWSYRFNSRSKNKGWRIDYCMVSDNMKPKVKAAY 235 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I SDH P ++ ++ Sbjct: 236 ILNDA----VHSDHCPAVLEIE 253 >gi|153806611|ref|ZP_01959279.1| hypothetical protein BACCAC_00881 [Bacteroides caccae ATCC 43185] gi|149131288|gb|EDM22494.1| hypothetical protein BACCAC_00881 [Bacteroides caccae ATCC 43185] Length = 263 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 83/263 (31%), Positives = 139/263 (52%), Gaps = 12/263 (4%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59 ++ + T+NVN +RA + L W+++ NPDI+CLQETK + +P E ++L Y ++ + Sbjct: 1 MMKIITYNVNGLRAAVSKGLPEWLEQENPDILCLQETKLQPDQYPVEVFEALGYKSYLYS 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GVA+L+K +P + + + D + RFI A F L + ++Y P G Sbjct: 61 AQKKGYSGVALLTKQEPDHVEYGMGMEAYDNEGRFIRADFG----DLSVVSVYHPSG-TS 115 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K+ W++ F ++ + + LI GDYNI +P D ++P+ ++ F E Sbjct: 116 GDERQAFKMVWLEDFQKYVLELQKSRPNLILCGDYNICHEPIDIHDPVRNAKNSGFLPEE 175 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R+ + GF D+ R + Y++W Y +S +KNKG RID+ M S LL SA Sbjct: 176 REWMTRFLAAGFIDSFRMLYPEKQEYTWWSYRFNSRAKNKGWRIDYCMASEPVRPLLMSA 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 RI SDH P+++ + Sbjct: 236 RILNDAM----HSDHCPMMLEIK 254 >gi|119469281|ref|ZP_01612220.1| exonuclease III [Alteromonadales bacterium TW-7] gi|119447145|gb|EAW28414.1| exonuclease III [Alteromonadales bacterium TW-7] Length = 268 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 76/267 (28%), Positives = 126/267 (47%), Gaps = 9/267 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V ++N+N +RAR+H L A I ++ PD+I LQE K D+ FP + +Q + YH+ GQK Sbjct: 1 MKVISFNINGLRARLHQLQAVIDKHQPDVIGLQEIKVHDEAFPLDDVQKMGYHVYFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHL-PGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121 ++ GVA+L K +P ++ + + N + + + N Y P G+ I Sbjct: 61 AHYGVAMLCKKEPKSVLKGFATDTEESQKRMISVTIEQDNGRDITVMNGYFPQGDNINHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175 TK+ K + K + L ++ ++ GD NI P D + F Sbjct: 121 TKFPYKRQFYKDLMTHLDTNLTPDQDVVVMGDINISPTDLDIGIGEVNAKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E RQ L + GF D R + + YS++DY + + N+G+RID ++ + Sbjct: 181 QPEERQWLSTLLDWGFKDTFRELYPDVNDQYSWFDYRSKGFLDNRGLRIDVVLATQSLAE 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261 + ID + R KPSDH P+ + Sbjct: 241 RCIDSGIDYELRAIDKPSDHAPIWSTF 267 >gi|134099932|ref|YP_001105593.1| AP endonuclease [Saccharopolyspora erythraea NRRL 2338] gi|291008673|ref|ZP_06566646.1| AP endonuclease [Saccharopolyspora erythraea NRRL 2338] gi|133912555|emb|CAM02668.1| AP endonuclease, family 1:exodeoxyribonuclease III xth [Saccharopolyspora erythraea NRRL 2338] Length = 265 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 68/265 (25%), Positives = 123/265 (46%), Gaps = 5/265 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+NS+ AR+ L W+ +PD++C+QE K FP + +L Y + G Sbjct: 1 MRIATWNLNSVTARLPRLLEWLSAASPDVLCVQELKCSSDMFPVAEVSALGYEVAAYGTG 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT-----INTQTLRIGNLYLPHGNP 118 +NGV +LS+ E+ LPG+ + + ++ +R+ ++Y+P+G Sbjct: 61 RWNGVGVLSRVGLDEVRRGLPGEPGYLPEGAMFEVNEPRAIGVSCAGVRLWSVYVPNGRY 120 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + YD K+ +++ + + GD+NI P D ++ + T Sbjct: 121 VGHPHYDYKLRFLEALRDTVAAERDHGRAFAVLGDFNIAPADDDVWDISAFAESTHVTEP 180 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R + L+ G D +++WDY A ++ KN G+RID P T + Sbjct: 181 ERSALADLRAAGLADVYPRALKYDVPFTYWDYRAGAFPKNMGMRIDLAYGDPRFTGAVSD 240 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263 + +D + R SDH P+++ LD+ Sbjct: 241 SYVDREARKGKGASDHAPLVIDLDL 265 >gi|110633439|ref|YP_673647.1| exodeoxyribonuclease III [Mesorhizobium sp. BNC1] gi|110284423|gb|ABG62482.1| Exodeoxyribonuclease III [Chelativorans sp. BNC1] Length = 259 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 85/260 (32%), Positives = 136/260 (52%), Gaps = 3/260 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+N+N+I R+ NL W+ + PD++CLQE K D FP ++S Y GQK Sbjct: 1 MKIATFNINNINKRLPNLLEWLHLSKPDVVCLQELKATDDAFPKSAIESFGYRAVWKGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 S+NGVAILS+ + A + + I ++Y P+GNP K Sbjct: 61 SWNGVAILSRVGEPVLTR---TRLPGDAADTQARYIEAAVRGVLIASIYAPNGNPQPGPK 117 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 +D K++W++R + A+ + P++ AGD+N+ P D Y W ++A E R +F Sbjct: 118 FDYKLAWLERLRKHATALRKTGAPIVLAGDFNVAPTDIDIYPTKSWGDNALIQPESRAAF 177 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 ++L +TD IR H +Y+FWDY W ++ G+R+DH++LS + A +D Sbjct: 178 RRLLGRSWTDGIRLLHPEQRIYTFWDYKRLRWQRDAGLRLDHLLLSENLRGAIVKAGVDR 237 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 RG SDH P + L++ Sbjct: 238 DVRGREGASDHAPAWIELNL 257 >gi|126208451|ref|YP_001053676.1| exonuclease III [Actinobacillus pleuropneumoniae L20] gi|303251086|ref|ZP_07337272.1| exonuclease III [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|303253573|ref|ZP_07339711.1| exonuclease III [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|126097243|gb|ABN74071.1| exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|302647493|gb|EFL77711.1| exonuclease III [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|302650096|gb|EFL80266.1| exonuclease III [Actinobacillus pleuropneumoniae serovar 6 str. Femo] Length = 267 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 80/267 (29%), Positives = 128/267 (47%), Gaps = 8/267 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A I+++ PD++ LQE K D++FP++ + L YH+ GQK Sbjct: 1 MKFISFNINGLRARPHQLEAIIEKHQPDVLGLQEIKVADEDFPWDLVNHLGYHVFHHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122 + GVA+L+K +P+ + P D+ D Q R I A L + N Y P G + T Sbjct: 61 GHYGVALLTKKEPLAVRKGFPTDNADAQKRMIMADIETEFGVLTVLNGYFPQGENRSHET 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + + L E P++ GD NI P + + F Sbjct: 121 KFPAKEKFYADLQHYLESELSPENPIVIMGDMNISPTDLDIGIGEPNRKRWLRDGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +L + G D RA + + +S++DY + + N+G+RID ++ S Sbjct: 181 PEEREWLDRLYSYGLIDTFRAMNPQANDKFSWFDYRSKGFDDNRGLRIDLVLASKGLAER 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262 ID + R KPSDH+PV Sbjct: 241 CVETGIDLEIRAMEKPSDHSPVWAVFK 267 >gi|292488442|ref|YP_003531324.1| exonuclease III [Erwinia amylovora CFBP1430] gi|291553871|emb|CBA20916.1| Exonuclease III [Erwinia amylovora CFBP1430] Length = 301 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 82/266 (30%), Positives = 123/266 (46%), Gaps = 8/266 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A ++++ PD+I LQETK D FP + SL YH+ GQK Sbjct: 34 MKFVSFNINGLRARPHQLQAIVEQHQPDVIGLQETKVHDDMFPLAEVASLGYHVFYHGQK 93 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122 + GVA+L K QP+ + DD D Q R I A + L + N Y P G Sbjct: 94 GHYGVALLCKQQPVAVRRGFASDDEDAQRRIIMADIMTPSGLLTVINGYFPQGESRDHPT 153 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + + + Q+ + + L+ GD NI + + F Sbjct: 154 KFPAKEKFYRDLHSYLEQQQKPDNQLLIMGDMNISSGDLDIGIGEENRKRWLRTGKCSFL 213 Query: 177 LEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ KL N G D RA H + +S++DY + + N+G+RID ++ S Sbjct: 214 PEEREWMDKLMNWGLVDTWRAQHATINDRFSWFDYRSKGFDDNRGLRIDLVLASRPLADR 273 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 + ID R KPSDH P+ Sbjct: 274 CVATGIDYDIRAMEKPSDHAPIWAEF 299 >gi|127513190|ref|YP_001094387.1| exonuclease III [Shewanella loihica PV-4] gi|126638485|gb|ABO24128.1| Exodeoxyribonuclease III [Shewanella loihica PV-4] Length = 269 Score = 201 bits (511), Expect = 1e-49, Method: Composition-based stats. Identities = 89/264 (33%), Positives = 134/264 (50%), Gaps = 9/264 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +RAR+H L A I ++PDII LQETK D+ FP ++++ Y + G K Sbjct: 1 MKIVSFNINGLRARLHQLQALIDSHSPDIIGLQETKVHDEAFPLAEVEAMGYQVHYHGGK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT-INTQTLRIGNLYLPHGNPITS- 121 ++ GVA+LSK P+++ P DD + Q R I TFT N + L + N Y P G I+ Sbjct: 61 AHYGVAMLSKLPPVKVQKGFPTDDDEAQRRMIMGTFTQANGRQLTVLNGYFPQGENISHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175 TKY K + + + + Q +E + GD NI P D + F Sbjct: 121 TKYPAKRKFYQDLMHYLQQHHSPDEDIAIIGDINISPIDLDIGIGEVNAKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R+ Q L + G D R H YS++DY + + N+G+RID I+ +P Sbjct: 181 QPEEREWLQTLLDWGLVDTFRQLHPTRSERYSWFDYRSKGFDDNRGLRIDVILATPSLAE 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVI 258 L + +D RG KPSDH P+ Sbjct: 241 RLTESDVDYDLRGIDKPSDHAPIW 264 >gi|59801894|ref|YP_208606.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae FA 1090] gi|59718789|gb|AAW90194.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae FA 1090] Length = 256 Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 91/260 (35%), Positives = 136/260 (52%), Gaps = 4/260 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + TWNVNS+ R+ + + +N PDI+ LQE K + FP LQ + +H GQK Sbjct: 1 MKITTWNVNSLNVRLPQVQNLLVDNPPDILVLQELKLDQDKFPAAALQMMGWHCVWSGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAI+S+ P ++ LP D Q R I AT +R+ N+Y +G + S K Sbjct: 61 TYNGVAIVSRSVPQDVHFGLPSLPDDPQRRVIAATVGG----VRVINVYCVNGEALDSPK 116 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K W F + L+ GD+NI P DCY+P W + RQ F Sbjct: 117 FKYKEQWFAALTEFVRDEMSRHGKLVLLGDFNIAPADADCYDPEKWYEKIHCSSVERQWF 176 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q L ++G TD++R H Y+++DY + + G+RIDHI+++ E ++L RID Sbjct: 177 QNLLDLGLTDSLRQVHPEGAFYTWFDYRGAMFQRKLGLRIDHILVTSEMAAVLKDVRIDL 236 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 + R +PSDH PV D+ Sbjct: 237 ETRALERPSDHAPVAAEFDL 256 >gi|313499091|gb|ADR60457.1| Exonuclease III [Pseudomonas putida BIRD-1] Length = 270 Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 85/269 (31%), Positives = 133/269 (49%), Gaps = 11/269 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + +N+N +RAR H LAA I+++ PD+I LQETK D FP +Q+L YH+ GQK Sbjct: 1 MKIVCFNINGLRARPHQLAALIEKHQPDVIGLQETKVSDDQFPLADVQALGYHVHYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122 + GVA+LS+ P+ + D+ D Q RFI TF + + I N Y P G Sbjct: 61 GHYGVALLSRQAPLSLHKGFATDEEDAQRRFIWGTFADADGSPITIMNGYFPQGESRDHP 120 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175 K+ K + + ++P++ GD NI PQ D + F Sbjct: 121 TKFPAKQRFYSDLQALLESQFRNDQPVLVMGDMNISPQDCDIGIGPDNAKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232 E R+ ++L+ G D+ R + +S++DY + + +G+RID IM S + Sbjct: 181 LPEEREWMERLKGWGLVDSFRHLYPEVTDRFSWFDYRSRGFEDEPKRGLRIDLIMASQQL 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + +A +D + RG KPSDH P+ + L Sbjct: 241 VPRIKAAGVDYELRGMEKPSDHAPIWLEL 269 >gi|212634722|ref|YP_002311247.1| exonuclease III [Shewanella piezotolerans WP3] gi|212556206|gb|ACJ28660.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Shewanella piezotolerans WP3] Length = 268 Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 78/264 (29%), Positives = 131/264 (49%), Gaps = 9/264 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +RAR+H L A I + PD+I LQETK D+ FP ++++ Y + G K Sbjct: 1 MKIVSFNINGLRARLHQLQALIDSHQPDVIGLQETKVHDEAFPLADVEAMGYKVHYHGGK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLD-VQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121 ++ GVA+LSK +P+++ P D+ D + + N + L + N Y P G+ I+ Sbjct: 61 AHYGVAMLSKAEPLKVQKGFPTDEEDAQRRMIMGTFMQENGRQLTVLNGYFPQGDNISHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175 TKY K + K + + ++ +E + GD NI P + F Sbjct: 121 TKYPAKRKFYKDLMVYLNEHHSADEDIAIIGDINISPVDLDIGIGEPNAKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R+ + L + G D R H YS++DY + + N+G+RID ++ + + Sbjct: 181 QPEEREWLKTLMDWGLVDTFRQLHPTRTERYSWFDYRSKGFVDNRGLRIDVVLATKSLAA 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVI 258 L + +D RG KPSDH P+ Sbjct: 241 RLVESDVDYDLRGIEKPSDHAPIW 264 >gi|254498807|ref|ZP_05111518.1| conserved hypothetical protein [Legionella drancourtii LLAP12] gi|254351971|gb|EET10795.1| conserved hypothetical protein [Legionella drancourtii LLAP12] Length = 265 Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 90/261 (34%), Positives = 151/261 (57%), Gaps = 5/261 (1%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 V +A+WNVNS++ R+ + AW++ + D++ LQETK D+NFP YHI GQ Sbjct: 8 VFKLASWNVNSLKIRLDQVLAWMETSQMDVLALQETKLLDENFPAAAFIEKGYHIVYSGQ 67 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K+YNGVAI+S+Y +++T +P + + +R+ +LY+P+G+ +TS Sbjct: 68 KTYNGVAIISRYPITDVMTDVPDLADPQRRIL-----AVTVAGIRLIDLYVPNGSELTSD 122 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 KY K+ W+++ F Q++ + + GD+NI P+ D ++P+ W++ + R++ Sbjct: 123 KYQYKLHWLQKVTAFIQQQMSIYPKVAVVGDFNIAPEDRDVHDPLEWQDSVLVSPPEREA 182 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F L +G D+ R +S+WDY A + +N+G+RIDH++LS E L + ID Sbjct: 183 FAALLQLGLYDSFRNFVQAEQSFSWWDYRAAGFRRNRGLRIDHVLLSQELNVLCRQSCID 242 Query: 243 TKPRGWTKPSDHTPVIVSLDI 263 +PR +PSDH PV V L++ Sbjct: 243 VEPRKTERPSDHAPVWVELEL 263 >gi|26989609|ref|NP_745034.1| exonuclease III [Pseudomonas putida KT2440] gi|24984490|gb|AAN68498.1|AE016481_14 exodeoxyribonuclease III [Pseudomonas putida KT2440] Length = 270 Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 86/269 (31%), Positives = 133/269 (49%), Gaps = 11/269 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + +N+N +RAR H LAA I+++ PD+I LQETK D FP +Q+L YH+ GQK Sbjct: 1 MKIVCFNINGLRARPHQLAALIEKHQPDVIGLQETKVSDDQFPLADVQALGYHVHYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122 + GVA+LS+ P+ + D+ D Q RFI TF N + I N Y P G Sbjct: 61 GHYGVALLSRQPPLSLHKGFATDEEDAQRRFIWGTFADANGSPITIMNGYFPQGESRDHP 120 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175 K+ K + + ++P++ GD NI PQ D + F Sbjct: 121 TKFPAKQRFYSDLQALLESQFRNDQPVLVMGDMNISPQDCDIGIGPDNAKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232 E R+ ++L+ G D+ R + +S++DY + + +G+RID IM S + Sbjct: 181 LPEEREWMERLKGWGLVDSFRHLYPDVTDRFSWFDYRSRGFEDEPKRGLRIDLIMASQQL 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + +A +D + RG KPSDH P+ + L Sbjct: 241 VPRIKAAGVDYELRGMEKPSDHAPIWLEL 269 >gi|120598407|ref|YP_962981.1| exonuclease III [Shewanella sp. W3-18-1] gi|146293514|ref|YP_001183938.1| exonuclease III [Shewanella putrefaciens CN-32] gi|120558500|gb|ABM24427.1| Exodeoxyribonuclease III [Shewanella sp. W3-18-1] gi|145565204|gb|ABP76139.1| Exodeoxyribonuclease III [Shewanella putrefaciens CN-32] Length = 270 Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 87/268 (32%), Positives = 131/268 (48%), Gaps = 9/268 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +R+R+H L A I + PDII LQETK D+ FP ++++ Y + G K Sbjct: 1 MKIVSFNINGLRSRLHQLQALIDSHKPDIIGLQETKVHDEAFPLAEVEAMGYQVHYHGGK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122 ++ GVA+LSK P +I P DD D Q R I TF N + L + N Y P G I Sbjct: 61 AHYGVAMLSKVAPQKIQKGFPSDDEDAQRRMIIGTFSQANGRPLTVFNGYFPQGESIDHP 120 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175 KY K + + + + +E + GD NI P D + F Sbjct: 121 TKYPAKRKFYQDLMHYLQTNHSNDEDIAIIGDINISPTDLDIGIGEVNRKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R+ + LQ+ G D R H YS++DY + + N+G+RID I+ +P + Sbjct: 181 QPEEREWLKTLQDWGLIDTFRQLHPERTERYSWFDYRSKGFDDNRGLRIDVILATPSLAA 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 L + +D RG KPSDH P+ + Sbjct: 241 RLVESDVDYDLRGIDKPSDHAPIWSTFK 268 >gi|251792404|ref|YP_003007130.1| exonuclease III [Aggregatibacter aphrophilus NJ8700] gi|247533797|gb|ACS97043.1| exodeoxyribonuclease III [Aggregatibacter aphrophilus NJ8700] Length = 267 Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 81/267 (30%), Positives = 121/267 (45%), Gaps = 8/267 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V ++N+N +RAR H L I + PD++ LQE K D+ FP+E + L YH+ GQK Sbjct: 1 MKVMSFNINGLRARPHQLEEIIDKYQPDVLGLQEIKVADEVFPYELVDHLGYHVNHYGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122 + GVA+LSK P+ + P D + Q R I L + N Y P G Sbjct: 61 GHYGVALLSKQAPLSVKKGFPTDGEEAQKRIIMIDLETPFGQLTVINGYFPQGESRKHPT 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + R+ Q E P+I GD NI P + + F Sbjct: 121 KFPAKQKFYADLQRYLEQEHNAENPVIIMGDMNISPSDLDIGIGDENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +Q+L G D R + T + +S++DY + + N+G+RIDHI+ + + Sbjct: 181 PEEREWYQRLYAYGLEDTFRYMNPTVNDKFSWFDYRSKGFDDNRGLRIDHILANKALVAH 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262 I R KPSDH P+ Sbjct: 241 CVDTGIALDIRAMEKPSDHAPIWAEFK 267 >gi|213961670|ref|ZP_03389936.1| exodeoxyribonuclease III [Capnocytophaga sputigena Capno] gi|213955459|gb|EEB66775.1| exodeoxyribonuclease III [Capnocytophaga sputigena Capno] Length = 254 Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 82/262 (31%), Positives = 131/262 (50%), Gaps = 14/262 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY---HIET 59 + + ++NVN IRA + A W+K NPD++CLQE K + P E L Y + + Sbjct: 1 MKIISYNVNGIRAALTKGFADWLKSANPDVLCLQEIKALEDQIPTEIFTELGYTYQYYHS 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GVAILSK P + D +D + R + A F L + +LYLP G I Sbjct: 61 AEKKGYSGVAILSKIAPKHVEVGTGIDYMDKEGRVLRADFET----LSVMSLYLPSGTNI 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 D K++++ F ++ + + L+ GDYNI + D ++P+ + F Sbjct: 117 DR--LDFKLTFMADFQKYIDKLKQTVPNLVICGDYNICHEAIDIHDPVRNATVSGFLPVE 174 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R+ K GF D+ R H H YS+W Y A++ + NKG RID+ ++S + + A Sbjct: 175 REWLDKFMKSGFIDSFRYFHKEPHQYSWWSYRANARNNNKGWRIDYHLVSTPLENRMERA 234 Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261 I + K SDH P+++ + Sbjct: 235 LILPEA----KHSDHCPIVLEI 252 >gi|294670922|ref|ZP_06735778.1| hypothetical protein NEIELOOT_02626 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291307409|gb|EFE48652.1| hypothetical protein NEIELOOT_02626 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 261 Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 95/258 (36%), Positives = 135/258 (52%), Gaps = 4/258 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ R+ + W+ ++ PDI+ LQE K + FP LQ + +H GQK Sbjct: 1 MKIATWNVNSLNVRLPQVQNWLADHRPDILALQELKLDQDKFPAAALQMMGWHSVWSGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAI+S+ +P ++ T LP D Q R I AT +RI N+Y +G + S K Sbjct: 61 TYNGVAIISRGEPQDVHTGLPTLPDDPQRRVIAATVNG----VRIVNVYCVNGEALDSPK 116 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K W F L E LI GD+NI P DCY P W + RQ F Sbjct: 117 FQYKEQWFAALTEFLRNELSRHEKLILLGDFNIAPADADCYAPEKWHEKILCSSIERQWF 176 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q L ++G TD++R H Y+++DY + + +G+RIDHI+ S S L ++D Sbjct: 177 QNLLDLGLTDSLRQIHPEGAFYTWFDYRGAMFQRKQGLRIDHILTSRTMASALQDMQVDY 236 Query: 244 KPRGWTKPSDHTPVIVSL 261 R +PSDH PV Sbjct: 237 DTRALERPSDHAPVWAQF 254 >gi|319408771|emb|CBI82428.1| exodeoxyribonuclease III [Bartonella schoenbuchensis R1] Length = 263 Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 131/259 (50%), Positives = 177/259 (68%), Gaps = 1/259 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+ I+AR L W+++N PDI+CLQE K D NFP + +++L YHIET GQK Sbjct: 1 MKIATWNIAGIKARHDTLCKWLQKNQPDIVCLQEIKCIDANFPRDEIETLGYHIETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 S+NGVA+LSK +P E++ LPGDD D QAR+IEA ++ N +R+ +LYLP+GNPI S K Sbjct: 61 SFNGVALLSKKRPDELIRQLPGDDNDEQARYIEAVYSTNKGVVRVASLYLPNGNPINSEK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W++R A L E+PLI AGDYN+IP P D P W+NDA F + RQ+F Sbjct: 121 HLYKMRWMERLYTHAKSLLAYEDPLILAGDYNVIPTPLDAKKPEEWKNDALFLPQTRQAF 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q++ +GF D+IR D +SFWD+ A +W KN GIRIDH++LSPEA L A T Sbjct: 181 QRIIYLGFYDSIRNVTD-DSSFSFWDFQAGAWRKNNGIRIDHLLLSPEAADQLVCAYSQT 239 Query: 244 KPRGWTKPSDHTPVIVSLD 262 + RG+ KPSDH PV + L+ Sbjct: 240 EVRGYEKPSDHVPVWIELN 258 >gi|322514720|ref|ZP_08067746.1| exodeoxyribonuclease III [Actinobacillus ureae ATCC 25976] gi|322119315|gb|EFX91431.1| exodeoxyribonuclease III [Actinobacillus ureae ATCC 25976] Length = 305 Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 82/267 (30%), Positives = 125/267 (46%), Gaps = 8/267 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A I+++ PD+I LQE K D++FP++ + L YH+ GQK Sbjct: 39 MKFISFNINGLRARPHQLEALIEKHQPDVIGLQEIKVADEDFPWDLVNHLGYHVFHHGQK 98 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122 + GVA+L+K +P+ + P DD D Q R I A L + N Y P G T Sbjct: 99 GHYGVALLTKKEPLAVRKGFPTDDADAQKRMIMADIETEFGVLTVLNGYFPQGENRAHET 158 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + + L E P++ GD NI P + + F Sbjct: 159 KFPAKEKFYADLQHYLETELTPENPIVIMGDMNISPTDLDIGIGEPNRKRWLRDGKCSFL 218 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +L N G D R + + +S++DY + + N+G+RID ++ S Sbjct: 219 PEEREWLDRLYNYGLVDTFRVMNPQANDKFSWFDYRSKGFDDNRGLRIDLVLASKGLAGH 278 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262 ID + R KPSDH PV Sbjct: 279 CVETGIDLEIRAMEKPSDHAPVWAVFK 305 >gi|49474410|ref|YP_032452.1| exodeoxyribonuclease III [Bartonella quintana str. Toulouse] gi|49239914|emb|CAF26312.1| Exodeoxyribonuclease III [Bartonella quintana str. Toulouse] Length = 260 Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 131/259 (50%), Positives = 177/259 (68%), Gaps = 1/259 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+ I+AR L W+++N PDI+CLQE K+ D+NFP + ++SL YHIET GQK Sbjct: 1 MKIATWNIAGIKARHETLYQWLQQNQPDIVCLQEIKSTDENFPCDAIESLGYHIETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 S+NGVAILSK P E++ LPG++ D Q R+IEA ++ N +R+ +LYLP+GNP+ S K Sbjct: 61 SFNGVAILSKKTPDEVIRRLPGNNNDEQTRYIEAVYSTNKGVIRVASLYLPNGNPVKSEK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W++R A L EEPL+ AGDYN+IP P D NP W NDA F + R +F Sbjct: 121 YSYKMEWMERLYAHAKSLLAYEEPLVLAGDYNVIPTPLDAKNPQKWSNDALFLPQTRNAF 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q++ ++GF DAIR DT +SFWD+ A +W KN GIRIDH++LSPEA L A T Sbjct: 181 QRIVHLGFYDAIRNVTDTP-SFSFWDFQAGAWHKNNGIRIDHLLLSPEAVDQLICAYSQT 239 Query: 244 KPRGWTKPSDHTPVIVSLD 262 + RG+ K SDH PV + L+ Sbjct: 240 EVRGYPKSSDHAPVWIDLN 258 >gi|255013539|ref|ZP_05285665.1| exodeoxyribonuclease [Bacteroides sp. 2_1_7] Length = 253 Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 81/260 (31%), Positives = 135/260 (51%), Gaps = 12/260 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60 + + T+N N +RA + L W+ + PD++C+QETK + FP ET ++L Y ++ + Sbjct: 1 MKIITYNTNGLRAAVGKGLPEWLAQEQPDVLCIQETKLQPDQFPAETFEALGYKSYLFSA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GVAIL+K +P + + + D + RFI A F L + ++Y P G Sbjct: 61 QKKGYSGVAILTKQEPDHVEYGMGIERYDNEGRFIRADFG----DLSVVSVYHPSG-TSG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + D K+ W++ F ++ + + LI GDYNI +P D ++PI ++ F E R Sbjct: 116 DERQDFKMVWLEDFQKYVVELQKSRPNLILCGDYNICHEPIDIHDPIRNAKNSGFLPEER 175 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + + + GF D R + Y++W Y +S +KNKG RID+ M+S S + +A Sbjct: 176 EWMTRFLSAGFIDTFRLLNPEKQEYTWWSYRFNSRAKNKGWRIDYCMVSEAMKSRVKAAY 235 Query: 241 IDTKPRGWTKPSDHTPVIVS 260 I SDH P ++ Sbjct: 236 ILNDA----VHSDHCPAVLE 251 >gi|240850841|ref|YP_002972241.1| exodeoxyribonuclease III [Bartonella grahamii as4aup] gi|240267964|gb|ACS51552.1| exodeoxyribonuclease III [Bartonella grahamii as4aup] Length = 260 Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 134/260 (51%), Positives = 176/260 (67%), Gaps = 1/260 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+ I+AR L W++++ PDI+CLQE K+ D+NFP + +++L YHIET GQK Sbjct: 1 MKIATWNIAGIKARHETLCQWLQQSQPDIVCLQEIKSIDENFPRDAIENLGYHIETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 S+NGVAILSK P E++ LPG+D D Q R+IEA ++ N +R+ +LYLP+GNPI S K Sbjct: 61 SFNGVAILSKKTPDEVIRRLPGNDNDEQTRYIEAVYSTNKGVVRVASLYLPNGNPIESEK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y KI W++R A L EEPLI AGDYN+IP P D P W DA F E R+ F Sbjct: 121 YSYKIEWMERLYTHAKSLLAYEEPLILAGDYNVIPAPLDAKKPQEWYQDALFLQETRKVF 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q++ N+G DAIR DT +SFWD+ A +W KN GIRIDH++LSPEA L A T Sbjct: 181 QRILNLGLYDAIRNVTDTP-SFSFWDFQAGAWPKNNGIRIDHLLLSPEAVDQLICAHSQT 239 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 + RG+ KPSDH PV + L+I Sbjct: 240 EVRGYQKPSDHVPVWIHLNI 259 >gi|116873216|ref|YP_849997.1| exodeoxyribonuclease III [Listeria welshimeri serovar 6b str. SLCC5334] gi|116742094|emb|CAK21218.1| exodeoxyribonuclease III [Listeria welshimeri serovar 6b str. SLCC5334] Length = 251 Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 67/262 (25%), Positives = 121/262 (46%), Gaps = 13/262 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + +E + DI CLQETK ++ + L++ + + Sbjct: 1 MKLISWNVNGLRAAVKKGFLEYFEEVDADIFCLQETKLQEGQIELD-LKAYKDYWNYAVK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +P+ + L + D + R I F + Sbjct: 60 KGYSGTAIFTKVEPLSVQYGLGIPEHDTEGRVITLEFEAF-----FMVTVYTPNSQAELK 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + D ++++ L + L+ +P++ GD N+ + D NP +A F+ E R Sbjct: 115 RLDYRMTFEDAILEYIKN-LDKTKPVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F + GF D+ R + YS+W Y ++ ++N G RID+ ++S L A+I Sbjct: 174 FSAFLDAGFIDSFRYFYPDLTDAYSWWSYRMNARARNTGWRIDYFVVSKRLKDKLVDAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 ++ G SDH PV + L++ Sbjct: 234 HSEVLG----SDHCPVELELNL 251 >gi|167624545|ref|YP_001674839.1| exonuclease III [Shewanella halifaxensis HAW-EB4] gi|167354567|gb|ABZ77180.1| exodeoxyribonuclease III [Shewanella halifaxensis HAW-EB4] Length = 268 Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 82/264 (31%), Positives = 133/264 (50%), Gaps = 9/264 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +RAR+H L A I + PDII LQETK D+ FP ++++ YH+ G K Sbjct: 1 MKIVSFNINGLRARLHQLQALIDTHQPDIIGLQETKVHDEAFPLADVEAMGYHVHYHGGK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLD-VQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121 ++ GVA+LSK +PI++ P D+ D + + N + L + N Y P G+ I+ Sbjct: 61 AHYGVAMLSKAEPIKVQKGFPTDEEDAQRRMIMGTFMQENGRPLTVINGYFPQGDNISHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175 TKY K + K +++ ++ +E + GD NI P + F Sbjct: 121 TKYPAKRKFYKDLMQYLNEYHSADEDIAIIGDINISPVDLDIGIGEPNAKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R+ + L + G D R H YS++DY + + N+G+RID I+ + Sbjct: 181 QPEEREWLKTLMDWGLVDTFRELHPTRSERYSWFDYRSKGFVDNRGLRIDVILATKSLAQ 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVI 258 L + +D + RG KPSDH P+ Sbjct: 241 HLTESDVDYELRGIEKPSDHAPIW 264 >gi|71279793|ref|YP_269869.1| exonuclease III [Colwellia psychrerythraea 34H] gi|71145533|gb|AAZ26006.1| exodeoxyribonuclease III [Colwellia psychrerythraea 34H] Length = 268 Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 81/267 (30%), Positives = 131/267 (49%), Gaps = 9/267 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +RAR+H L A I ++ PDII LQE K D+ FP E ++++ YH+ GQK Sbjct: 1 MKIISFNINGLRARLHQLQAIIDKHQPDIIGLQEIKVHDEAFPLEAVEAMGYHVYFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLD-VQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121 ++ GVA+L K + + P DD + + + T + + + N Y P G I+ Sbjct: 61 AHYGVAMLCKKEAESVQRGFPTDDDEAQRRMIMVTTTNDKGEKVTVLNGYFPQGENISHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW------ENDACF 175 TKY K + K + + + +E ++ GD NI PQ D + F Sbjct: 121 TKYPYKRKFYKDLMTYLNDNHVNDENVVVMGDINISPQDLDIGIGDVNSKRWLKSGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R+ +L + GF D R H YS++DY + + N+G+RID ++ + Sbjct: 181 QPEEREWLTRLMDWGFVDTFRQLHPDTTERYSWFDYRSRGFDDNRGLRIDVVLATKNMAE 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261 A ID + R KPSDH P+ + Sbjct: 241 QCIEADIDYELRAIEKPSDHAPIWSTF 267 >gi|73540991|ref|YP_295511.1| exodeoxyribonuclease III [Ralstonia eutropha JMP134] gi|72118404|gb|AAZ60667.1| Exodeoxyribonuclease III [Ralstonia eutropha JMP134] Length = 275 Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 84/264 (31%), Positives = 132/264 (50%), Gaps = 6/264 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENN-----PDIICLQETKTEDKNFPFETLQSLNYHIE 58 + +A+WNVNS++ R+ + W+ E D +CLQE K D +P L++ +H Sbjct: 11 LRIASWNVNSLKVRLPQVLQWLTEQEQAGAPIDALCLQELKLPDDKYPLAELENAGFHSV 70 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 GQK+YNGVAIL++ + + + + +R+ Y P+G Sbjct: 71 YTGQKTYNGVAILARDASMPGPVDVVRNIPGFEDAQQRVVAATYGD-IRLVCAYFPNGQA 129 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 S K+ K+ W+ + + L L GD+NI P+ D ++P WE + + Sbjct: 130 PDSDKFVYKLKWLDAMTAWLREELAKYPRLALLGDFNIAPEDRDVHDPAKWEGQNLVSPQ 189 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R +F L +G DA R +S+WDY ++ +N G+RIDHI+LSPE S + Sbjct: 190 ERAAFTALVELGLADAFRKFEQPEKAFSWWDYRMFAFRRNAGLRIDHILLSPELASSCSA 249 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 ID PR W +PSDHTPV+ +L+ Sbjct: 250 CVIDRAPRTWEQPSDHTPVVATLN 273 >gi|283833419|ref|ZP_06353160.1| exodeoxyribonuclease III [Citrobacter youngae ATCC 29220] gi|291071073|gb|EFE09182.1| exodeoxyribonuclease III [Citrobacter youngae ATCC 29220] Length = 268 Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 79/268 (29%), Positives = 125/268 (46%), Gaps = 8/268 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H LAA ++++ PD+I LQETK D FP E + L Y++ GQK Sbjct: 1 MKFVSFNINGLRARPHQLAAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122 + GVA+L+K PI + P D + Q R I A ++ + N Y P G T Sbjct: 61 GHYGVALLTKETPIAVRRGFPNDGEEAQRRIIMAEIPSPLGSITVINGYFPQGESRDHET 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K ++ + + L+ + P++ GD NI P + + F Sbjct: 121 KFPAKAAFYQNLQNYLETELKRDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ ++L G D R +S++DY + + N+G+RID ++ S Sbjct: 181 PEEREWMERLLGWGLVDTYRHAWPEKNDQFSWFDYRSKGFDDNRGLRIDLLLASNPLAER 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 ID + R KPSDH PV + Sbjct: 241 CEETGIDYEIRSMEKPSDHAPVWAKFRV 268 >gi|291165919|gb|EFE27966.1| exodeoxyribonuclease III [Filifactor alocis ATCC 35896] Length = 251 Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 73/262 (27%), Positives = 113/262 (43%), Gaps = 13/262 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN IRA + + KE + DI CLQETK ++ E L+ + + + Sbjct: 1 MKLISWNVNGIRACVKKGFLDFFKETDADIFCLQETKLQEGQIELE-LEGYHQYWNYAER 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +P+ + L ++ D + R I F + Sbjct: 60 KGYSGTAIFTKQEPLSVSYGLGIEEHDQEGRVITLEFDNFYMVTVYTPNSKNELLRLDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + R RL +P+I GD N+ Q D NP + +A FT+E R Sbjct: 120 M------VWEDEFRSYLLRLNETKPVIVCGDLNVAHQEIDLKNPKTNQKNAGFTIEERTK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 L + GF D R + YS+W Y ++ N G RID+ + S E L A+I Sbjct: 174 MSTLLDSGFIDTFRFFYPELEGAYSWWSYRFNARKNNAGWRIDYFLTSQELKENLKDAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 + G SDH PV + ++ Sbjct: 234 HSDILG----SDHCPVELDIEW 251 >gi|221134651|ref|ZP_03560954.1| exonuclease III [Glaciecola sp. HTCC2999] Length = 269 Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 84/267 (31%), Positives = 129/267 (48%), Gaps = 9/267 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N IRAR+H L A I ++PD+I LQE K ++ FP ++++ YH+ GQK Sbjct: 1 MKIISFNINGIRARLHQLQALIDSHSPDVIGLQEIKVDNAQFPISDVEAMGYHVVYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT-FTINTQTLRIGNLYLPHGNPITST 122 ++ GVA+L+K PI + LP D + Q R I T T N + + I N Y P G I Sbjct: 61 AHYGVAMLTKNPPISVQYGLPSDTDEHQKRLIAVTLPTNNGKDITIYNGYFPQGENIKHD 120 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175 K+ K+ + + + ++ +I GD NI P D + F Sbjct: 121 TKFPYKVDFYRDLTAHLAATHGPDDQVIVMGDINISPTDLDIGIGPDNAKRWLRSGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 R LQ +G+ D R YS++DY + + N+G+RID I+ S Sbjct: 181 QPIERDMLATLQALGYHDTFRCLTPEKTDRYSWFDYRSKGFVDNRGLRIDVILASTTLLP 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261 L + ID + RG KPSDH P+ Sbjct: 241 LCTESEIDYELRGIEKPSDHAPIFAVF 267 >gi|330446636|ref|ZP_08310288.1| exodeoxyribonuclease III [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328490827|dbj|GAA04785.1| exodeoxyribonuclease III [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 268 Score = 201 bits (510), Expect = 1e-49, Method: Composition-based stats. Identities = 82/268 (30%), Positives = 132/268 (49%), Gaps = 9/268 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V ++N+N +RAR+H L A I+++ PD+I LQE K D+ FP ++++ Y + GQK Sbjct: 1 MKVISFNINGLRARLHQLQALIEKHQPDVIGLQEIKVHDEAFPLADVEAMGYKVYFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLD-VQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121 ++ GVA+L K +PI + P DD D + + N + L + N Y P G+ ++ Sbjct: 61 AHYGVAMLCKQEPISVQKGFPTDDEDAQRRMIMATFKQENGKDLTVMNGYFPQGDNVSHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175 TK+ K + + + + +E LI GD NI P + F Sbjct: 121 TKFPAKEKFYADLMNYLNTAHTNDEELIVMGDINISPIDLDIGIGPANAKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 R+ Q L + GF D R H T +S++DY + + N+G+RID I+ +P Sbjct: 181 QPIEREWLQTLLDWGFIDTFRQLHPTVDDKFSWFDYRSKGFVDNRGLRIDVILATPSLAE 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + ID + RG KPSDH P+ + Sbjct: 241 RCVESDIDYELRGIEKPSDHAPIWSTFK 268 >gi|302541699|ref|ZP_07294041.1| exodeoxyribonuclease III [Streptomyces hygroscopicus ATCC 53653] gi|302459317|gb|EFL22410.1| exodeoxyribonuclease III [Streptomyces himastatinicus ATCC 53653] Length = 259 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 77/257 (29%), Positives = 128/257 (49%), Gaps = 1/257 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSI AR+ L AW++ + D++C+QETK + FPFE L+ L Y Sbjct: 1 MRIATWNVNSITARLPRLLAWLESSGTDVLCVQETKCAEAAFPFEPLRELGYEAAVNATG 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVA+LS+ E+V+ LPG + A +R+ ++Y+P+G I Sbjct: 61 RWNGVAVLSRVGLDEVVSGLPGGPDYEGDQEPRAIAATCGP-VRVWSVYVPNGREIGHPH 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 YD K+ W+ + + P GD+N+ P D ++ ++ T + R++ Sbjct: 120 YDYKLRWLDTLREAVGEDAKGPRPFAVLGDFNVAPTDDDVWDRTRFDGLTHVTDKEREAL 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 L+ G +D + H +++WDY + KN+G+RID + + + A +D Sbjct: 180 AALRGAGLSDVVPRPLKYDHPFTYWDYRELCFPKNRGMRIDLVYGNGAFADAVGDAYVDR 239 Query: 244 KPRGWTKPSDHTPVIVS 260 + R SDH PV+V Sbjct: 240 EERKGKGASDHAPVVVD 256 >gi|170727269|ref|YP_001761295.1| exonuclease III [Shewanella woodyi ATCC 51908] gi|169812616|gb|ACA87200.1| exodeoxyribonuclease III [Shewanella woodyi ATCC 51908] Length = 268 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 86/264 (32%), Positives = 131/264 (49%), Gaps = 9/264 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N IRAR+H L A I + PDII LQETK D FP ++++ Y + G K Sbjct: 1 MKIVSFNINGIRARLHQLQALIDSHQPDIIGLQETKAHDDVFPVADVEAMGYKVHYHGGK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI-NTQTLRIGNLYLPHGNPITS- 121 ++ GVA+LSK +P+++ P D D Q R I TFT N + L + N Y P G I+ Sbjct: 61 AHYGVAMLSKLEPVKVQKGFPTDGEDAQRRMIMGTFTQENGRPLTVLNGYFPQGENISHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175 TKY K + K + + ++ +E + GD NI P + F Sbjct: 121 TKYPAKRQFYKDLMIYLNEHHSADEDIAVIGDINISPIDLDIGIGEPNAKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R+ + L + G D R H YS++DY + + N+G+RID ++ + Sbjct: 181 QPEEREWLKTLMDWGLLDTFRELHPERVDRYSWFDYRSKGFDDNRGLRIDVVLATKSLAD 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVI 258 L + +D RG KPSDH P+ Sbjct: 241 RLVESDVDYDLRGIEKPSDHAPIW 264 >gi|90406919|ref|ZP_01215110.1| exodeoxyribonuclease III [Psychromonas sp. CNPT3] gi|90311961|gb|EAS40055.1| exodeoxyribonuclease III [Psychromonas sp. CNPT3] Length = 269 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 85/267 (31%), Positives = 128/267 (47%), Gaps = 9/267 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V ++N+N +RAR+H L A I ++ PD+I LQE K + FP E ++ + YH+ GQK Sbjct: 1 MKVISFNINGLRARLHQLQAIIDKHQPDVIGLQEIKVHNDMFPLEAVEKMGYHVYYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121 ++ GVA+L K +P+ + P DD + + N + I N Y P G T Sbjct: 61 AHYGVAMLCKKEPVSVQYGFPTDDDEHQKRMIMVTFEDANGEKTTILNGYFPQGESQTHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175 KY K + K + E+ +I GD NI P D + F Sbjct: 121 IKYPYKRQFYKDLNTYLESHHCAEDNVIIMGDINISPLDLDIGIGEINAKRWLKTKKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E RQ +KL + GFTD R H YS++DY + + N+G+RID I+ + + Sbjct: 181 QPEERQWLKKLMDFGFTDTFRLLHPEVSDQYSWFDYRSRGFDDNRGLRIDVILATQKIAD 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261 ++ ID + RG KPSDH P+ Sbjct: 241 NTLNSGIDYELRGIEKPSDHAPIWTEF 267 >gi|296158362|ref|ZP_06841193.1| exodeoxyribonuclease III Xth [Burkholderia sp. Ch1-1] gi|295891306|gb|EFG71093.1| exodeoxyribonuclease III Xth [Burkholderia sp. Ch1-1] Length = 258 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 84/258 (32%), Positives = 127/258 (49%), Gaps = 1/258 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS++ R ++ W++ D++CLQE K D+ FP L Y GQK Sbjct: 1 MKIATWNVNSLKVRQQHVIDWLETTGTDVLCLQELKLPDEKFPRAELAEKGYRSWFAGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGV IL + + + + + T R+ + Y P+G + K Sbjct: 61 TYNGVGILVRDGLTVDESSIVRNIPGFEDPQQRVIAATIEDT-RVISAYFPNGQAPGTDK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W+ + + + L L GDYNI P+ D ++P WE + E R F Sbjct: 120 FAYKLRWLAALHDWIASEMALHPKLALLGDYNIAPEDRDVHDPKAWEGQNLVSPEERAEF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +L +G DA R +YS+WDY ++ +N G+RIDHI+LS + S ID Sbjct: 180 VRLIGLGLVDAFRRFEQPEKIYSWWDYRMMAFRRNAGLRIDHILLSKALAEVCSSCDIDK 239 Query: 244 KPRGWTKPSDHTPVIVSL 261 PR W +PSDH PV+ L Sbjct: 240 VPRKWDQPSDHAPVVAQL 257 >gi|145220782|ref|YP_001131460.1| exodeoxyribonuclease III Xth [Mycobacterium gilvum PYR-GCK] gi|315442264|ref|YP_004075143.1| exodeoxyribonuclease III [Mycobacterium sp. Spyr1] gi|145213268|gb|ABP42672.1| Exodeoxyribonuclease III [Mycobacterium gilvum PYR-GCK] gi|315260567|gb|ADT97308.1| Exodeoxyribonuclease III [Mycobacterium sp. Spyr1] Length = 272 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 84/270 (31%), Positives = 126/270 (46%), Gaps = 12/270 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSIRAR+ + W++ + D++ +QETK D+ FP +L Y + CG Sbjct: 1 MRLATWNVNSIRARVDRVTDWLERADVDVLAMQETKCSDEQFPTMPFAALGYDVVHCGFS 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-----TQTLRIGNLYLPHGNP 118 +NGVAI S+ + G EA +R+ +LY+P+G Sbjct: 61 QWNGVAIASRVGIDAVEVGFEGQPTWSDKPEAEAAAEARALGATCGGVRVWSLYVPNGRS 120 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIF--AGDYNIIPQPHDCYNPIIWENDACFT 176 I S Y K+ W+ A L + GD+NI P D ++ ++ T Sbjct: 121 IDSPHYTYKLKWLAALHNTAQGWLADDPSTPVALVGDWNIAPVDDDVWDISLFSESTHVT 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 R +F + + GFTD +R +++WDY + KN+G+RID I+ SP L+ Sbjct: 181 APERAAFNAIVDAGFTDVVRPFTPGPGTFTYWDYTQLRFPKNRGMRIDFILGSPTLAELV 240 Query: 237 HSARIDTKPRGWTK-----PSDHTPVIVSL 261 A I R K PSDH PV+V L Sbjct: 241 THAEIARDERKTGKNRVGSPSDHAPVVVDL 270 >gi|260436042|ref|ZP_05790012.1| exodeoxyribonuclease III [Synechococcus sp. WH 8109] gi|260413916|gb|EEX07212.1| exodeoxyribonuclease III [Synechococcus sp. WH 8109] Length = 288 Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats. Identities = 86/272 (31%), Positives = 139/272 (51%), Gaps = 4/272 (1%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSY 65 +ATWNVNS+R R+ + +W++ PD++CLQETK +D FP E +S +H+ GQK+Y Sbjct: 14 IATWNVNSVRTRLDQVLSWLESEQPDLLCLQETKVDDPLFPLEAFKSAGWHVHIHGQKAY 73 Query: 66 NGVAILSKYQPIEIVTHLPGDDLDVQAR----FIEATFTINTQTLRIGNLYLPHGNPITS 121 NGVA++S+ ++ G+ + + + +R+ NLY+P+G+ + S Sbjct: 74 NGVALISREPLEDVRCGFAGELPNDAEANDLGAQKRVISAMLNGVRVLNLYVPNGSSLKS 133 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 KY K++W+ R+ + + EPL GD+NI + D +P + RQ Sbjct: 134 EKYPYKLAWLGCLKRYLDAQEQRGEPLCMVGDFNIGLEARDLPDPDRQTGGIMASDAERQ 193 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 + + D R +S+WDY + +W +++G RIDH+ L E L S I Sbjct: 194 ALRDALGERLQDVFRVFEPDSGHWSWWDYRSGAWDRDRGWRIDHVYLCDELLGLARSCVI 253 Query: 242 DTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDS 273 + RG +PSDH PV V +D P + D Sbjct: 254 HKRMRGNQQPSDHAPVSVVVDWPPTDDDEGDE 285 >gi|306836965|ref|ZP_07469915.1| exodeoxyribonuclease III [Corynebacterium accolens ATCC 49726] gi|304567148|gb|EFM42763.1| exodeoxyribonuclease III [Corynebacterium accolens ATCC 49726] Length = 269 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 81/267 (30%), Positives = 133/267 (49%), Gaps = 8/267 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + TWN+NS+R R + ++ D++CLQETK +D FP E + YH+ G Sbjct: 1 MRITTWNINSVRTRAQRALDLLHTHDIDVLCLQETKVKDDKFPREAFEDAGYHVTCHGLN 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT-----QTLRIGNLYLPHGNP 118 +NGVAI+SK QP E+ T P + + + I +LY+P+G Sbjct: 61 QWNGVAIISKEQPEEVFTGFPHQPGFAKDPEKPQDREARALGARIRGVEIWSLYIPNGRE 120 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 IT YD K+ ++ + R+A+ + + L+ GD+NI P+ D ++ + T Sbjct: 121 ITDRHYDYKLDFLYQLSRYAAGHAQSK--LLLTGDFNIAPRDEDVWDIEAFRGKTHVTEP 178 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R +FQ L+ G + R + Y+++DY + KN+G+RID + SP + Sbjct: 179 ERAAFQMLEEAGLEEVTRRFTE-DQRYTYFDYKGMRFHKNEGMRIDFQLASPPLAKHVTG 237 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIPE 265 AR+D + R K SDH P+ D+P+ Sbjct: 238 ARVDMEERAGEKTSDHCPLHADFDLPD 264 >gi|258626823|ref|ZP_05721630.1| exodeoxyribonuclease III [Vibrio mimicus VM603] gi|258580870|gb|EEW05812.1| exodeoxyribonuclease III [Vibrio mimicus VM603] Length = 268 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 79/268 (29%), Positives = 127/268 (47%), Gaps = 9/268 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V ++N+N +RAR+H L A I ++ PD+I LQE K D+ FP + ++++ Y + GQK Sbjct: 1 MKVISFNINGLRARLHQLQALIDKHQPDVIGLQEIKVHDEAFPRQEVEAMGYQVYFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGD-DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121 ++ GVAIL K P+E++ P D + + + + I N Y P G+ + Sbjct: 61 AHYGVAILCKQTPVEVIKGFPTDSEEHQKRMIMATFADEDGNKTTILNGYFPQGDNVEHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175 TK+ K + + + + + E L+ GD NI P + F Sbjct: 121 TKFPYKRQFYRDLMTYLREHRSNTERLVVMGDINISPLDLDIGIGEANRKRWLQTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R+ Q L + G D R H +S++DY + + N+G+RID I+ +P Sbjct: 181 QPEEREWLQTLMDWGLVDTFRQLHPEVSDQFSWFDYRSRGFDDNRGLRIDVILATPTLAE 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 A ID + RG KPSDH P+ Sbjct: 241 TCQEAGIDYELRGIDKPSDHAPIWAIFK 268 >gi|148277|gb|AAA24767.1| exonuclease III [Escherichia coli] Length = 268 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 77/266 (28%), Positives = 124/266 (46%), Gaps = 8/266 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A ++++ PD+I LQETK D FP E + ++ Y++ GQK Sbjct: 1 MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVANVGYNVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 + GVA+L+K PI + PGDD + Q R I A + + N Y P G Sbjct: 61 GHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSLLGNVTVINGYFPQGESRDHPI 120 Query: 124 -YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 + K + + + L+ + P++ GD NI P + + F Sbjct: 121 KFPAKAQFYQNLQNYLETELKRDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +L + G D R + +S++DY + + N+G+RID ++ S Sbjct: 181 PEEREWMDRLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAEC 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 ID + R KPSDH PV + Sbjct: 241 CVETGIDYEIRSMEKPSDHAPVWATF 266 >gi|325276378|ref|ZP_08142153.1| exodeoxyribonuclease III [Pseudomonas sp. TJI-51] gi|324098490|gb|EGB96561.1| exodeoxyribonuclease III [Pseudomonas sp. TJI-51] Length = 264 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 99/262 (37%), Positives = 150/262 (57%), Gaps = 5/262 (1%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 M + +AT+N+N I +R+ L W+K PDI CLQE K D FP + +++ Y Sbjct: 1 MKNLRIATFNINGISSRLPALLEWLKRERPDIACLQELKAADNKFPRQEIEAAGYGCVYQ 60 Query: 61 GQKSYNGVAILSKY-QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 GQ ++NGVAIL++ +P+E+ LPG + D Q+R++EA + +G LYLP+GNP Sbjct: 61 GQPAWNGVAILARDSEPLEVRRGLPGMEDDTQSRYLEAA----AHGVLVGCLYLPNGNPQ 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K+D K+ W + ++ A P + AGD+N++P D Y+ W DA E Sbjct: 117 PGPKFDYKLRWFECLIQHARTLYANGHPALLAGDFNVVPTDLDIYDTRSWLKDALLQPES 176 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R F+ L G+TDA+R + +Y+FWDY+ + W++N G+RIDH++L+ E + L A Sbjct: 177 RACFEHLLTQGWTDAVRHLYPDERVYTFWDYFRNHWARNAGLRIDHLLLNRELSPYLKGA 236 Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261 +D R K SDH PV V L Sbjct: 237 GVDAWVRNEAKASDHAPVWVEL 258 >gi|330829038|ref|YP_004391990.1| exodeoxyribonuclease III [Aeromonas veronii B565] gi|328804174|gb|AEB49373.1| Exodeoxyribonuclease III [Aeromonas veronii B565] Length = 268 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 78/265 (29%), Positives = 133/265 (50%), Gaps = 9/265 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +RAR+H L A I ++ PD+I LQE K D+ FP ++++ YH+E GQK Sbjct: 1 MKIISFNINGLRARLHQLQAIIDKHQPDVIGLQEIKVHDEAFPLADVEAMGYHVEFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLD-VQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121 ++ GVAI+SK +P+++ P DD + + + + +++ N Y P G Sbjct: 61 AHYGVAIMSKQKPVKVEKGFPTDDEEAQRRMIMATFEREDGSLIKVMNGYFPQGESQDHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175 TK+ K + + + ++ L+ GD NI P + + F Sbjct: 121 TKFPAKQKFYEDLQHYLETNHTPDDQLVLIGDMNISPTDLDIGIGEANRKRWLRDGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 R+ ++L+ G TD RA + T +S++DY + + +N+G+RID IM S Sbjct: 181 LPIEREWMERLKGFGLTDTFRAANPTECERFSWFDYRSKGFDENRGLRIDLIMASDALKD 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIV 259 + ID + RG KPSDH P+ Sbjct: 241 SVTETGIDYELRGIEKPSDHAPIWA 265 >gi|147920374|ref|YP_685852.1| exodeoxyribonuclease III [uncultured methanogenic archaeon RC-I] gi|110621248|emb|CAJ36526.1| exodeoxyribonuclease III [uncultured methanogenic archaeon RC-I] Length = 257 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 73/265 (27%), Positives = 119/265 (44%), Gaps = 12/265 (4%) Query: 1 MSVVTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 M+ + + +WNVN +RA + +++E NPDI+CLQET+ ++ P E + S YH+ Sbjct: 1 MTELEILSWNVNGLRAILKKGFVDFMQEKNPDILCLQETRASEEQLPPEIMTSWGYHVYF 60 Query: 60 --CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 +K Y+GVAILSK +P+ + + D + R + A + + Sbjct: 61 ASGEKKGYSGVAILSKVKPLSVARGFGIPEFDREGRVLIADYGAF-----VLLNIYFPNG 115 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + + K+ + FL +A + ++ GD N + D P + F Sbjct: 116 KASPERLAYKMRFYNAFLEYADRLKAQGRKIVVCGDVNTAHKEIDIARPRENSKISGFLP 175 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 R KL G+ D R +D Y+FWD + +N G RID+ +S L Sbjct: 176 VERAWMDKLIAHGYVDTFRLFNDQPGQYTFWDTVTRARERNVGWRIDYFFVSENLKEQLK 235 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLD 262 +A I T+ G SDH P+ + LD Sbjct: 236 AAFIMTEIMG----SDHCPIGIRLD 256 >gi|325145191|gb|EGC67473.1| exodeoxyribonuclease III [Neisseria meningitidis M01-240013] Length = 256 Score = 200 bits (509), Expect = 2e-49, Method: Composition-based stats. Identities = 90/260 (34%), Positives = 134/260 (51%), Gaps = 4/260 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + TWNVNS+ R+ + + +N PDI+ LQE K + FP LQ + +H GQK Sbjct: 1 MKITTWNVNSLNVRLPQVQNLLADNPPDILVLQELKLDQDKFPAAALQMMGWHCVWSGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAI+S+ P ++ LP D Q R I AT +R+ N+Y +G + S K Sbjct: 61 TYNGVAIVSRNAPEDVNIGLPALPDDPQRRVIAATVGG----VRVINVYCVNGEALDSPK 116 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K W F + L+ GD+NI P DCY+P W + RQ F Sbjct: 117 FKYKEQWFAALTEFVRDEMARHGKLVLLGDFNIAPADADCYDPEKWYEKIHCSTVERQWF 176 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q L ++G TD++R H Y+++DY + + G+RIDHI+++ E ++L R+D Sbjct: 177 QNLLDLGLTDSLRHIHPEGAFYTWFDYRGAMFQRKLGLRIDHILVTSEMAAVLKDVRVDL 236 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 R +PSDH PV D Sbjct: 237 DTRALERPSDHAPVTAEFDW 256 >gi|77360282|ref|YP_339857.1| exonuclease III [Pseudoalteromonas haloplanktis TAC125] gi|76875193|emb|CAI86414.1| exonuclease III [Pseudoalteromonas haloplanktis TAC125] Length = 268 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 81/268 (30%), Positives = 122/268 (45%), Gaps = 9/268 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V ++N+N +RAR+H L A I ++ PDII LQE K D+ FP E +Q + YH+ GQK Sbjct: 1 MKVISFNINGLRARLHQLQAIIDKHQPDIIGLQEIKVHDEAFPLEDVQKMGYHVYYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHL-PGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121 ++ GVA+L K +P + + + N + L + N Y P G I Sbjct: 61 AHYGVAMLCKKEPKSVFKGFATDTEESQKRMISVTVEQDNGRDLTVMNGYFPQGENINHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175 TK+ K + K + +E +I GD NI P D + F Sbjct: 121 TKFPYKRQFYKDLMTHLQTNHTPDEDVIVMGDINISPTNLDIGIGEVNAKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 R+ L N GF D R + YS++DY + + N+G+RID ++ + E + Sbjct: 181 QPIEREWLATLLNWGFKDTFREQNPETSDQYSWFDYRSKGFLDNRGLRIDVVLATHELAA 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 ID + RG KPSDH P+ Sbjct: 241 RCIDTGIDYELRGIEKPSDHAPIWSEFK 268 >gi|121635466|ref|YP_975711.1| exodeoxyribonuclease III [Neisseria meningitidis FAM18] gi|120867172|emb|CAM10939.1| exodeoxyribonuclease III [Neisseria meningitidis FAM18] gi|325132946|gb|EGC55623.1| exodeoxyribonuclease III [Neisseria meningitidis M6190] gi|325138934|gb|EGC61484.1| exodeoxyribonuclease III [Neisseria meningitidis ES14902] gi|325142997|gb|EGC65353.1| exodeoxyribonuclease III [Neisseria meningitidis 961-5945] gi|325198917|gb|ADY94373.1| exodeoxyribonuclease III [Neisseria meningitidis G2136] Length = 256 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 90/260 (34%), Positives = 134/260 (51%), Gaps = 4/260 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + TWNVNS+ R+ + + +N PDI+ LQE K + FP LQ + +H GQK Sbjct: 1 MKITTWNVNSLNVRLPQVQNLLADNPPDILVLQELKLDQDKFPAAALQMMGWHCVWSGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAI+S+ P ++ LP D Q R I AT +R+ N+Y +G + S K Sbjct: 61 TYNGVAIVSRNAPEDVHIGLPALPDDPQRRVIAATVGG----VRVINVYCVNGEALDSPK 116 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K W F + L+ GD+NI P DCY+P W + RQ F Sbjct: 117 FKYKEQWFAALTEFVRDEMARHGKLVLLGDFNIAPADADCYDPEKWYEKIHCSTVERQWF 176 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q L ++G TD++R H Y+++DY + + G+RIDHI+++ E ++L R+D Sbjct: 177 QNLLDLGLTDSLRHIHPEGAFYTWFDYRGAMFQRKLGLRIDHILVTSEMAAVLKDVRVDL 236 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 R +PSDH PV D Sbjct: 237 DTRALERPSDHAPVTAEFDW 256 >gi|326383425|ref|ZP_08205112.1| exodeoxyribonuclease III Xth [Gordonia neofelifaecis NRRL B-59395] gi|326197831|gb|EGD55018.1| exodeoxyribonuclease III Xth [Gordonia neofelifaecis NRRL B-59395] Length = 260 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 78/260 (30%), Positives = 124/260 (47%), Gaps = 3/260 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSIRAR + AW+ + D++ +QETK D FP + + Y + G Sbjct: 1 MRLATWNVNSIRARSEQVVAWMNRHAIDVLAMQETKCPDDQFPVMSFLAHGYDVAFHGTG 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 YNGVAI S+ ++ G R A +R+ +LY+P+G Sbjct: 61 GYNGVAIASRIGVHDVHIGFDGQPTYDGEREARAISATCGD-VRVWSLYVPNGREPGHPH 119 Query: 124 YDDKISWIKRFLRFASQRLELEE--PLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + K+ W+ S L + ++ AGD+N+ P D ++P +E+ + E R Sbjct: 120 FQYKLDWLSALGDVTSLELSHDPAAQVVLAGDWNVAPTDDDVWDPEYFESRTHTSEEERA 179 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +F+ GF D+ Y+FWDY A +++N+G+RID + SP ++ A I Sbjct: 180 AFRHFIEGGFVDSAAPYTTDPKTYTFWDYQAGRFARNEGMRIDFALCSPALDDRVYDAFI 239 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 D R SDH P++ L Sbjct: 240 DRAARAAEGASDHAPIVFDL 259 >gi|241761646|ref|ZP_04759733.1| exodeoxyribonuclease III Xth [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|241373954|gb|EER63487.1| exodeoxyribonuclease III Xth [Zymomonas mobilis subsp. mobilis ATCC 10988] Length = 261 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 111/260 (42%), Positives = 160/260 (61%), Gaps = 6/260 (2%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64 +A++NVN I AR+ L W+++ PDI+CLQE K++D FP E ++ Y+ GQK+ Sbjct: 3 KIASFNVNGINARLPRLIEWLEKFQPDILCLQELKSDDARFPQEEIEKTGYYCLYHGQKA 62 Query: 65 YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124 YNGVAILSK QP I T LP D Q+R+IEA L + +LYLP+GNP+ S+KY Sbjct: 63 YNGVAILSKEQPKLIRTSLPDDPDPTQSRYIEAAID----NLTVSSLYLPNGNPLNSSKY 118 Query: 125 DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH--DCYNPIIWENDACFTLEVRQS 182 D K++W K FL A + E+ +I AGDYN++P D N ++A + Sbjct: 119 DYKLAWFKAFLAHARSLWQQEKSVILAGDYNVVPSFDIKDIRNAAALADNALLAPDSLFY 178 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 +++L MG+TD++R H + LYSFWDY A SW ++ G+RIDHI+L+P+ L + +D Sbjct: 179 WRQLLAMGWTDSLRVRHPSEPLYSFWDYQAQSWPRDDGMRIDHILLTPDLADGLTDSGVD 238 Query: 243 TKPRGWTKPSDHTPVIVSLD 262 + RG K SDH PV + +D Sbjct: 239 RQMRGQEKASDHAPVWIEID 258 >gi|88860007|ref|ZP_01134646.1| exodeoxyribonuclease III [Pseudoalteromonas tunicata D2] gi|88818001|gb|EAR27817.1| exodeoxyribonuclease III [Pseudoalteromonas tunicata D2] Length = 267 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 78/267 (29%), Positives = 122/267 (45%), Gaps = 8/267 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +RAR+H L A I+++ PD+I LQE K D+ FP ++++ YH+ GQK Sbjct: 1 MKIISFNINGLRARLHQLQALIEKHQPDVIGLQEIKVHDEAFPLADVEAMGYHVYFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLD-VQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 ++ GVA+L K +P+ I P D + + Q ++I N Y P G+ I Sbjct: 61 AHYGVAMLCKKEPLSIEKGFPTDTDEAQRRMITVTIEDEQGQPVKIMNGYFPQGDSIHHE 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACFT 176 + L + L+ GD NI P D + F Sbjct: 121 TKFPYKEQFYKDLMTYLASQDPASQLVVMGDINISPLDKDIGIGEVNAKRWLKTGKCSFQ 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHH-LYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 RQ L GFTD R H + +S++DY + + N+G+RID I+ + + Sbjct: 181 PIERQWLADLMAWGFTDTFRQIHPDTNAHFSWFDYRSKGFDDNRGLRIDVILATASLAAR 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262 A ID + R KPSDH P+ S Sbjct: 241 CVDAGIDYELRAIDKPSDHAPIWASFK 267 >gi|157146023|ref|YP_001453342.1| exonuclease III [Citrobacter koseri ATCC BAA-895] gi|157083228|gb|ABV12906.1| hypothetical protein CKO_01777 [Citrobacter koseri ATCC BAA-895] Length = 268 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 78/268 (29%), Positives = 123/268 (45%), Gaps = 8/268 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L+A + ++ PD+I LQETK D FP E + L Y++ GQK Sbjct: 1 MKFVSFNINGLRARPHQLSAIVDKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122 + GVA+L+K P+ + P D + Q R I A ++ + N Y P G Sbjct: 61 GHYGVALLTKETPVSVRRGFPDDGEEAQRRIIMAEIPSPLGSITVINGYFPQGESRDHPL 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + + + L+ + P++ GD NI P + + F Sbjct: 121 KFPAKAQFYQNLQNYLDNELKRDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +L N G D R H +S++DY + + N+G+RID ++ S Sbjct: 181 PEEREWMDRLINWGLVDTFRHAHPETVDKFSWFDYRSKGFDDNRGLRIDLLLASNPLAEH 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 ID + R KPSDH PV + Sbjct: 241 CVETGIDYEIRSMEKPSDHAPVWAKFRV 268 >gi|90579330|ref|ZP_01235140.1| putative exodeoxyribonuclease III [Vibrio angustum S14] gi|90440163|gb|EAS65344.1| putative exodeoxyribonuclease III [Vibrio angustum S14] Length = 268 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 88/264 (33%), Positives = 133/264 (50%), Gaps = 9/264 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V ++N+N +RAR+H L A I+++ PD+I LQE K D+ FP ++++ Y + GQK Sbjct: 1 MKVISFNINGLRARLHQLQALIEKHQPDVIGLQEIKVHDEAFPLADVEAMGYKVYFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI-NTQTLRIGNLYLPHGNPITS- 121 ++ GVA+L K +PI + P DD D Q R I TF N + + + N Y P G+ I Sbjct: 61 AHYGVAMLCKQEPISVQKGFPTDDEDAQRRMIMTTFKQDNGKNITVMNGYFPQGDNIKHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175 TK+ K + + + + +E LI GD NI P + F Sbjct: 121 TKFPAKEKFYADLMNYLNTAHTNDEELIVMGDINISPTDLDIGIGPANAKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 R+ Q L + GF D R H T YS++DY + + N+G+RID I+ +P Sbjct: 181 QPVEREWLQTLLDWGFVDTFRQLHPTVDDKYSWFDYRSKGFVDNRGLRIDVILATPSLAE 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVI 258 + ID + RG KPSDH P+ Sbjct: 241 RCIESDIDYELRGIEKPSDHAPIW 264 >gi|39996639|ref|NP_952590.1| exonuclease III [Geobacter sulfurreducens PCA] gi|39983520|gb|AAR34913.1| exodeoxyribonuclease III [Geobacter sulfurreducens PCA] gi|298505653|gb|ADI84376.1| exodeoxyribonuclease III [Geobacter sulfurreducens KN400] Length = 271 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 91/271 (33%), Positives = 138/271 (50%), Gaps = 11/271 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++NVN +R+R+H L ++ + PDII LQETK +D +FP +Q+L YH+ GQK Sbjct: 1 MKLVSFNVNGLRSRLHQLEELVRTHRPDIIGLQETKVQDADFPLAAVQALGYHVIYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-TQTLRIGNLYLPHGNPITST 122 +++GVA+LS P ++ LPGD + Q RFI ATF + LR+ N Y P G Sbjct: 61 THHGVALLSLQPPRDVRLGLPGDGDEAQKRFIGATFDLPAGPPLRVINGYFPQGESRDHP 120 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175 K+ K + L + + + PL GD+NI P D + F Sbjct: 121 VKFPAKERFYADVLAYLKSSCDPDAPLAVMGDFNIAPVDPDIGIGADNAKRWLRTGKTSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232 E R F L++ G D+ R + +S++DY + + +G+RIDHI+L+ Sbjct: 181 LPEERAWFAALRDWGLHDSYRELYPDIDDRFSWFDYRSRGFESEPKRGLRIDHILLTRPL 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +A ID R KPSDH PV V +D+ Sbjct: 241 QQACRAAGIDYDIRAMEKPSDHCPVWVEVDV 271 >gi|329119607|ref|ZP_08248288.1| exodeoxyribonuclease III [Neisseria bacilliformis ATCC BAA-1200] gi|327464204|gb|EGF10508.1| exodeoxyribonuclease III [Neisseria bacilliformis ATCC BAA-1200] Length = 276 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 89/261 (34%), Positives = 132/261 (50%), Gaps = 4/261 (1%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +ATWNVNS+ R+ + W+ E+ PDI+ LQE K + FP L + + GQ Sbjct: 13 TMKIATWNVNSLNVRLPQVQNWLAEHQPDILALQELKLDQDKFPAAALAMMGWQCAWSGQ 72 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K+YNGVAI+S + ++ T LP D Q R I AT +R+ N+Y +G S Sbjct: 73 KTYNGVAIVSLHPLHDVRTGLPALPDDPQRRVIAATIGG----VRVINVYCVNGEAPDSP 128 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K+ K W F L + L+ GD+NI P DCY+P W T + R Sbjct: 129 KFQYKKQWFAALTEFVRGELARHDKLVLLGDFNIAPADADCYDPEKWRGKILCTDQERGW 188 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 FQ L +G TD++R H Y+++DY + + G+RIDH++ +P + L +A +D Sbjct: 189 FQTLLGLGLTDSLRRIHPEGAFYTWFDYRGAMFQRGLGLRIDHLLTTPALAAALQNAAVD 248 Query: 243 TKPRGWTKPSDHTPVIVSLDI 263 R +PSDH PV + Sbjct: 249 LDARAQERPSDHAPVWAEFAL 269 >gi|15641862|ref|NP_231494.1| exonuclease III [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121587322|ref|ZP_01677094.1| exodeoxyribonuclease III [Vibrio cholerae 2740-80] gi|147674047|ref|YP_001217394.1| exonuclease III [Vibrio cholerae O395] gi|153820118|ref|ZP_01972785.1| exodeoxyribonuclease III [Vibrio cholerae NCTC 8457] gi|227081989|ref|YP_002810540.1| exodeoxyribonuclease III [Vibrio cholerae M66-2] gi|229508043|ref|ZP_04397548.1| exodeoxyribonuclease III [Vibrio cholerae BX 330286] gi|229511718|ref|ZP_04401197.1| exodeoxyribonuclease III [Vibrio cholerae B33] gi|229518856|ref|ZP_04408299.1| exodeoxyribonuclease III [Vibrio cholerae RC9] gi|229607590|ref|YP_002878238.1| exonuclease III [Vibrio cholerae MJ-1236] gi|254848946|ref|ZP_05238296.1| exonuclease III [Vibrio cholerae MO10] gi|255745380|ref|ZP_05419329.1| exodeoxyribonuclease III [Vibrio cholera CIRS 101] gi|262153517|ref|ZP_06028646.1| exodeoxyribonuclease III [Vibrio cholerae INDRE 91/1] gi|262167417|ref|ZP_06035124.1| exodeoxyribonuclease III [Vibrio cholerae RC27] gi|298498101|ref|ZP_07007908.1| exodeoxyribonuclease III [Vibrio cholerae MAK 757] gi|9656389|gb|AAF95008.1| exodeoxyribonuclease III [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121548482|gb|EAX58540.1| exodeoxyribonuclease III [Vibrio cholerae 2740-80] gi|126509336|gb|EAZ71930.1| exodeoxyribonuclease III [Vibrio cholerae NCTC 8457] gi|146315930|gb|ABQ20469.1| exodeoxyribonuclease III [Vibrio cholerae O395] gi|227009877|gb|ACP06089.1| exodeoxyribonuclease III [Vibrio cholerae M66-2] gi|227013758|gb|ACP09968.1| exodeoxyribonuclease III [Vibrio cholerae O395] gi|229343545|gb|EEO08520.1| exodeoxyribonuclease III [Vibrio cholerae RC9] gi|229351683|gb|EEO16624.1| exodeoxyribonuclease III [Vibrio cholerae B33] gi|229355548|gb|EEO20469.1| exodeoxyribonuclease III [Vibrio cholerae BX 330286] gi|229370245|gb|ACQ60668.1| exodeoxyribonuclease III [Vibrio cholerae MJ-1236] gi|254844651|gb|EET23065.1| exonuclease III [Vibrio cholerae MO10] gi|255737210|gb|EET92606.1| exodeoxyribonuclease III [Vibrio cholera CIRS 101] gi|262024114|gb|EEY42808.1| exodeoxyribonuclease III [Vibrio cholerae RC27] gi|262030644|gb|EEY49279.1| exodeoxyribonuclease III [Vibrio cholerae INDRE 91/1] gi|297542434|gb|EFH78484.1| exodeoxyribonuclease III [Vibrio cholerae MAK 757] Length = 268 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 79/268 (29%), Positives = 128/268 (47%), Gaps = 9/268 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V ++N+N +RAR+H L A I ++ PD+I LQE K D+ FP + ++++ Y + GQK Sbjct: 1 MKVISFNINGLRARLHQLQALIDKHQPDVIGLQEIKVHDEAFPRQEVEAMGYQVYFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121 ++ GVAIL K P+E++ P ++ + + N Q I N Y P G+ + Sbjct: 61 AHYGVAILCKQTPVEVIKGFPTDNEEHQKRMIMATFADQNGQKTTILNGYFPQGDNVEHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175 TK+ K + + + + + E L+ GD NI P + F Sbjct: 121 TKFPYKRQFYRDLMTYLREHRSNSERLVVMGDINISPLDLDIGIGEANRKRWLQTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R+ Q L + G D R H +S++DY + + N+G+RID I+ +P Sbjct: 181 QPEEREWLQTLLDWGLVDTFRQLHPDVSDQFSWFDYRSRGFEDNRGLRIDVILATPTLAE 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 A ID + R KPSDH P+ + Sbjct: 241 TCQEAGIDYELRAIDKPSDHAPIWTTFK 268 >gi|260754011|ref|YP_003226904.1| exodeoxyribonuclease III Xth [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|258553374|gb|ACV76320.1| exodeoxyribonuclease III Xth [Zymomonas mobilis subsp. mobilis NCIMB 11163] Length = 261 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 113/260 (43%), Positives = 160/260 (61%), Gaps = 6/260 (2%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64 +A++NVN I AR+ L W+++ PDI+CLQE K++D FP E ++ Y+ GQK+ Sbjct: 3 KIASFNVNGINARLPRLIEWLEKFQPDILCLQELKSDDARFPQEEIEKTGYYCLYHGQKA 62 Query: 65 YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124 YNGVAILSK QP I T LP D Q+R+IEA L + +LYLP+GNP+ S KY Sbjct: 63 YNGVAILSKEQPKLIRTSLPDDPDPTQSRYIEAEID----NLTVASLYLPNGNPLNSPKY 118 Query: 125 DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH--DCYNPIIWENDACFTLEVRQS 182 D K++W K FL A + E+P+I AGDYN++P D N ++A E Sbjct: 119 DYKLAWFKAFLAHARSLWQQEKPVILAGDYNVVPSFDIKDIRNAAALADNALLAPESLFY 178 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 +++L MG+TD++R H + LYSFWDY A SW ++ G+RIDHI+L+P+ L + +D Sbjct: 179 WRQLLAMGWTDSLRVRHLSEPLYSFWDYQAQSWPRDDGMRIDHILLTPDLADGLTDSGVD 238 Query: 243 TKPRGWTKPSDHTPVIVSLD 262 + RG K SDH PV + +D Sbjct: 239 RQMRGQEKASDHAPVWIEID 258 >gi|319426820|gb|ADV54894.1| exodeoxyribonuclease III [Shewanella putrefaciens 200] Length = 270 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 87/268 (32%), Positives = 131/268 (48%), Gaps = 9/268 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +R+R+H L A I + PDII LQETK D+ FP ++++ Y + G K Sbjct: 1 MKIVSFNINGLRSRLHQLQALIDSHKPDIIGLQETKVHDEAFPLAEVEAMGYQVHYHGGK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122 ++ GVA+LSK P +I P DD D Q R I TF N + L + N Y P G I Sbjct: 61 AHYGVAMLSKVAPQKIQKGFPSDDEDAQRRMIIGTFSQANGRPLTVFNGYFPQGESIDHP 120 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175 KY K + + + + +E + GD NI P D + F Sbjct: 121 TKYPAKRKFYQDLMHYLQTNHSNDEDIAIIGDINISPTDLDIGIGEVNRKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R+ + LQ+ G D R H YS++DY + + N+G+RID I+ +P + Sbjct: 181 QPEEREWLKTLQDWGLIDTFRQLHPERTERYSWFDYRSKGFDDNRGLRIDVILATPSLAA 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 L + +D RG KPSDH P+ + Sbjct: 241 RLIESDVDYDLRGIDKPSDHAPIWSTFK 268 >gi|163868656|ref|YP_001609865.1| exodeoxyribonuclease III [Bartonella tribocorum CIP 105476] gi|161018312|emb|CAK01870.1| exodeoxyribonuclease III [Bartonella tribocorum CIP 105476] Length = 260 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 129/260 (49%), Positives = 176/260 (67%), Gaps = 1/260 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+ I+AR L W++++ PDI+CLQE K+ D++FP + +++L YHIET GQK Sbjct: 1 MKIATWNIAGIKARHETLYQWLQKSQPDIVCLQEIKSIDESFPRDAIENLGYHIETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 S+NGVAILSK P E++ LPG+D D Q R+IEA ++ N +RI +LYLP+GNPI S K Sbjct: 61 SFNGVAILSKKTPDEVIRRLPGNDNDEQTRYIEAVYSTNKGVVRIASLYLPNGNPIESEK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W++R L EEPL+ AGDYN+IP P D P W DA F + R++F Sbjct: 121 YSYKMEWMERLYAHTKSLLAYEEPLVLAGDYNVIPTPLDAKKPQEWNQDALFLQKTRKAF 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q++ ++G DAIR DT +SFWD+ A +W KN GIRIDH++LSPEA L A T Sbjct: 181 QRILHLGLYDAIRNVTDTP-SFSFWDFQAGAWPKNNGIRIDHLLLSPEAVDRLICAHSQT 239 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 + RG+ KPSDH PV + L+I Sbjct: 240 EVRGYPKPSDHVPVWIHLNI 259 >gi|163796419|ref|ZP_02190379.1| Exonuclease III [alpha proteobacterium BAL199] gi|159178269|gb|EDP62813.1| Exonuclease III [alpha proteobacterium BAL199] Length = 264 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 72/265 (27%), Positives = 111/265 (41%), Gaps = 5/265 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62 + V TWN+NS+R R+ I PD++CLQETK FP Y H G Sbjct: 1 MRVVTWNINSVRLRLPRALELIAAVQPDVLCLQETKAMADQFPAAAFAEAGYPHQAVSGM 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K YNGVA++S+ E D + + + +P + Sbjct: 61 KGYNGVAVVSRLPIEETDRCDFCAKADARHVAVRVAGGPELHNFYVPAG-GDVPDPAVNP 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K+ K+ ++ + + E+P+I GD NI P D ++ T ++ Sbjct: 120 KFAHKLDFLAESRAWFTAERTREQPMILVGDLNIAPLQTDVWSHKQLLGVVSHTPVEVEA 179 Query: 183 FQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLLHSA 239 LQ + LY++W Y A W N+G R+DH+ ++P + +A Sbjct: 180 LGALQADLGWVDAVRQRIPPEQSLYTWWSYRARDWDESNRGRRLDHVWVTPPLAGTVRAA 239 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIP 264 + + RGW K SDH PVIV LD+ Sbjct: 240 SVLREARGWEKASDHVPVIVDLDLS 264 >gi|114798068|ref|YP_760636.1| exodeoxyribonuclease III [Hyphomonas neptunium ATCC 15444] gi|114738242|gb|ABI76367.1| exodeoxyribonuclease III [Hyphomonas neptunium ATCC 15444] Length = 258 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 98/259 (37%), Positives = 145/259 (55%), Gaps = 2/259 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS++AR+ + + + N D++CLQE K E FP+ ++ L ++ GQK Sbjct: 1 MRIATWNVNSMKARLQTVLQVLTDINADVVCLQELKCETDAFPYLEIEELGWNCAVHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 SYNGVA+LSK+ ++ + D + + +R+G LYLP+GNP K Sbjct: 61 SYNGVALLSKFPLQDVTREMSTLKDDQARYIEAT--VLTDKPVRVGGLYLPNGNPAPGPK 118 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 YD K+ W+ A L+ EEP + GDYN IP P DC++ +W DA E R ++ Sbjct: 119 YDYKLEWVAALEDHARSLLKAEEPFVLCGDYNAIPAPEDCWDDTVWNTDALGLPETRAAW 178 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 ++L+++G TDA H Y+FWDY ++ K+ GIRIDHI+ P T L + I Sbjct: 179 RQLKHLGLTDAFEVCDGRAHQYTFWDYQGGAFQKDHGIRIDHILACPRMTDRLTAIEIYR 238 Query: 244 KPRGWTKPSDHTPVIVSLD 262 K R KPSDH P+I + Sbjct: 239 KARAMDKPSDHVPMIAIFE 257 >gi|21233468|ref|NP_639385.1| exodeoxyribonuclease III [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66770432|ref|YP_245194.1| exodeoxyribonuclease III [Xanthomonas campestris pv. campestris str. 8004] gi|188993642|ref|YP_001905652.1| Exodeoxyribonuclease III [Xanthomonas campestris pv. campestris str. B100] gi|21115315|gb|AAM43267.1| exodeoxyribonuclease III [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575764|gb|AAY51174.1| exodeoxyribonuclease III [Xanthomonas campestris pv. campestris str. 8004] gi|167735402|emb|CAP53617.1| Exodeoxyribonuclease III [Xanthomonas campestris pv. campestris] Length = 259 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 94/259 (36%), Positives = 140/259 (54%), Gaps = 6/259 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A+WNVNS+ R+ +L W+ + PD++ +QETK ED FP L +L Y CGQK Sbjct: 1 MKIASWNVNSLNVRLPHLQQWLADFAPDVVGIQETKLEDHKFPDAALAALGYRSVFCGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAILS+ +E+ +PG D Q +RI NLY+ +G + + K Sbjct: 61 TYNGVAILSRSPALEVQMGIPGFDDVQQRVIAATVDG-----VRIINLYVVNGQDVGTDK 115 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW-ENDACFTLEVRQS 182 Y K+ W++ + +Q L+ L+ GD+NI P D Y P +W +N + R + Sbjct: 116 YAYKLRWLEAVHDWIAQELQRHPQLVVLGDFNIAPDARDVYEPEVWSDNHILTSTAERGA 175 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 KL +G DA R HD +S+WDY ++ +N G+RID ++S + A ID Sbjct: 176 LHKLLALGLHDAFRLHHDDAGHFSWWDYRQAAYRRNLGLRIDLTLVSDALRARAVEAGID 235 Query: 243 TKPRGWTKPSDHTPVIVSL 261 +PR W +PSDH P V L Sbjct: 236 REPRTWERPSDHAPAWVRL 254 >gi|157961464|ref|YP_001501498.1| exonuclease III [Shewanella pealeana ATCC 700345] gi|157846464|gb|ABV86963.1| exodeoxyribonuclease III [Shewanella pealeana ATCC 700345] Length = 268 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 87/267 (32%), Positives = 136/267 (50%), Gaps = 9/267 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +RAR+H L A I + PDII LQETK D+ FPF ++++ Y + G K Sbjct: 1 MKIVSFNINGLRARLHQLQALIDSHQPDIIGLQETKVHDEAFPFADVEAMGYKVHYHGGK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI-NTQTLRIGNLYLPHGNPITS- 121 ++ GVA+LSK +PI++ P D+ D Q R I TFT N + L + N Y P G+ I+ Sbjct: 61 AHYGVAMLSKLEPIKVQKGFPTDEEDAQRRMIMGTFTQENGRPLTVLNGYFPQGDNISHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175 TKY K + K + + ++ +E + GD NI P + F Sbjct: 121 TKYPAKRKFYKDLMLYLNEYHSSDEDIAIIGDINISPVDLDIGIGEPNAKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R+ + L + G D R H YS++DY + + N+G+RID ++ + Sbjct: 181 QPEEREWLKTLMDWGLVDTFRELHPERSERYSWFDYRSKGFVDNRGLRIDVVLATKTLAE 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261 L + +D RG KPSDH P+ + Sbjct: 241 RLTESDVDYDLRGIDKPSDHAPIWSTF 267 >gi|301310211|ref|ZP_07216150.1| exodeoxyribonuclease III [Bacteroides sp. 20_3] gi|300831785|gb|EFK62416.1| exodeoxyribonuclease III [Bacteroides sp. 20_3] Length = 284 Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats. Identities = 82/265 (30%), Positives = 138/265 (52%), Gaps = 12/265 (4%) Query: 1 MSVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HI 57 + + + T+N N +RA + L W+ + PD++C+QETK + FP ET ++L Y ++ Sbjct: 29 LEKLKIITYNTNGLRAAVGKGLPEWLAQEQPDVLCIQETKLQPDQFPSETFEALGYKSYL 88 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 + +K Y+GVAIL+K +P I + + D + RF+ A F + I ++Y P G Sbjct: 89 FSAQKKGYSGVAILTKQEPDHIEYGMGIEKYDNEGRFLRADFG----DVSIVSVYHPSG- 143 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + D K+ W++ F ++ + + LI GDYNI +P D ++PI ++ F Sbjct: 144 TSGDERQDFKMLWLEDFQKYVVELQKSRPNLILCGDYNICHEPIDIHDPIRNAKNSGFLP 203 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 E R+ + + GFTD R + Y++W Y +S SKNKG RID+ M+S + Sbjct: 204 EEREWMTRFLSAGFTDTFRFLNPDKQEYTWWSYRFNSRSKNKGWRIDYCMVSDNMKPKVK 263 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLD 262 +A I SDH P ++ ++ Sbjct: 264 AAYILNDA----VHSDHCPAVLEIE 284 >gi|170721574|ref|YP_001749262.1| exonuclease III [Pseudomonas putida W619] gi|169759577|gb|ACA72893.1| exodeoxyribonuclease III [Pseudomonas putida W619] Length = 270 Score = 200 bits (507), Expect = 2e-49, Method: Composition-based stats. Identities = 86/269 (31%), Positives = 132/269 (49%), Gaps = 11/269 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + +N+N +RAR H LAA I+++ PD+I LQETK D FP +Q+L YH+ GQK Sbjct: 1 MKIVCFNINGLRARPHQLAALIEKHQPDVIGLQETKVSDDQFPLADVQALGYHVHYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122 + GVA+LS+ P+ + D+ D Q RFI TF N + I N Y P G Sbjct: 61 GHYGVALLSRQAPLSLFKGFATDEEDAQRRFIWGTFADANGTPITIMNGYFPQGESRDHP 120 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175 K+ K + + + ++P++ GD NI PQ D + F Sbjct: 121 TKFPAKQRFYSDLQALLEGQFKQDQPVLVMGDMNISPQDCDIGIGPDNAKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232 E R+ ++L+ G D+ R H +S++DY + + +G+RID IM S Sbjct: 181 LPEEREWMERLKGWGLVDSFRHLHPEVTDRFSWFDYRSRGFEDEPKRGLRIDLIMASQHL 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + +A +D + R KPSDH P+ + L Sbjct: 241 VPRIKAAGVDYELRAMEKPSDHAPIWLEL 269 >gi|89072737|ref|ZP_01159302.1| putative exodeoxyribonuclease III [Photobacterium sp. SKA34] gi|89051557|gb|EAR57011.1| putative exodeoxyribonuclease III [Photobacterium sp. SKA34] Length = 268 Score = 200 bits (507), Expect = 2e-49, Method: Composition-based stats. Identities = 81/268 (30%), Positives = 131/268 (48%), Gaps = 9/268 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V ++N+N +RAR+H L A I+++ PD+I LQE K D+ FP ++++ Y + GQK Sbjct: 1 MKVISFNINGLRARLHQLQALIEKHQPDVIGLQEIKVHDEAFPLADVEAMGYKVYFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLD-VQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121 ++ GVA+L K +PI + P DD + + + + + + + N Y P G+ I Sbjct: 61 AHYGVAMLCKQEPISVQKGFPTDDENAQRRMIMATFKQDSGKNITVMNGYFPQGDNIKHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175 TK+ K + + + + +E LI GD NI P + F Sbjct: 121 TKFPAKEKFYADLMNYLNTAHTNDEELIVMGDINISPMDLDIGIGPANAKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 R+ Q L + GFTD R H T YS++DY + + N+G+RID I+ +P Sbjct: 181 QPIEREWLQTLLDWGFTDTFRQLHPTVDDKYSWFDYRSKGFVDNRGLRIDVILATPSLAE 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + +D + RG KPSDH P+ Sbjct: 241 RCIESDVDYELRGIEKPSDHAPIWSVFK 268 >gi|46143793|ref|ZP_00134262.2| COG0708: Exonuclease III [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|165976406|ref|YP_001651999.1| exonuclease III [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|307245885|ref|ZP_07527970.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307247975|ref|ZP_07530006.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307250227|ref|ZP_07532183.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|307252613|ref|ZP_07534507.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307254858|ref|ZP_07536684.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307257023|ref|ZP_07538799.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|307259300|ref|ZP_07541029.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|307261462|ref|ZP_07543133.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|307263645|ref|ZP_07545256.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|165876507|gb|ABY69555.1| exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|306853245|gb|EFM85465.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306855529|gb|EFM87701.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306857756|gb|EFM89856.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306859935|gb|EFM91954.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306862229|gb|EFM94197.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306864507|gb|EFM96414.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306866667|gb|EFM98526.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306868857|gb|EFN00663.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306871022|gb|EFN02755.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 280 Score = 200 bits (507), Expect = 2e-49, Method: Composition-based stats. Identities = 80/267 (29%), Positives = 128/267 (47%), Gaps = 8/267 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A I+++ PD++ LQE K D++FP++ + L YH+ GQK Sbjct: 14 MKFISFNINGLRARPHQLEAIIEKHQPDVLGLQEIKVADEDFPWDLVNHLGYHVFHHGQK 73 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122 + GVA+L+K +P+ + P D+ D Q R I A L + N Y P G + T Sbjct: 74 GHYGVALLTKKEPLAVRKGFPTDNADAQKRMIMADIETEFGVLTVLNGYFPQGENRSHET 133 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + + L E P++ GD NI P + + F Sbjct: 134 KFPAKEKFYADLQHYLESELSPENPIVIMGDMNISPTDLDIGIGEPNRKRWLRDGKCSFL 193 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +L + G D RA + + +S++DY + + N+G+RID ++ S Sbjct: 194 PEEREWLDRLYSYGLIDTFRAMNPQANDKFSWFDYRSKGFDDNRGLRIDLVLASKGLAER 253 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262 ID + R KPSDH+PV Sbjct: 254 CVETGIDLEIRAMEKPSDHSPVWAVFK 280 >gi|117925756|ref|YP_866373.1| exodeoxyribonuclease III [Magnetococcus sp. MC-1] gi|117609512|gb|ABK44967.1| Exodeoxyribonuclease III [Magnetococcus sp. MC-1] Length = 257 Score = 200 bits (507), Expect = 2e-49, Method: Composition-based stats. Identities = 93/258 (36%), Positives = 140/258 (54%), Gaps = 3/258 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ R ++A W+ E+ D++CLQE K + FP E +SL +H+ GQK Sbjct: 1 MRIATWNVNSMNVRQEHVAQWLAEDPCDLLCLQELKMVSEKFPAERFKSLGWHLLANGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVA+LS++ E DL + + +R+ N Y+P+G+ + S K Sbjct: 61 TYNGVAVLSRFPLEE---RDVVLDLPGVDPAQKRLMAVTVNGVRVVNCYVPNGSEVGSDK 117 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W+ + F +L L+ GDYNI P D ++ W + R ++ Sbjct: 118 YHYKLDWLAKLQSFVQAQLASYPQLVVLGDYNIAPDDRDVHDVSFWAGKILVSPPERSAY 177 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q L +G TDA R +S+WDY S+ +N G+RIDH++ SP T+ L ID Sbjct: 178 QALCGLGLTDAFRHLQPEGGYFSWWDYRLGSFQRNMGVRIDHLLSSPALTAKLTHCHIDR 237 Query: 244 KPRGWTKPSDHTPVIVSL 261 +PRGW +PSDH PVI + Sbjct: 238 EPRGWERPSDHAPVIATY 255 >gi|222475141|ref|YP_002563557.1| exodeoxyribonuclease III (xthA2) [Anaplasma marginale str. Florida] gi|222419278|gb|ACM49301.1| exodeoxyribonuclease III (xthA2) [Anaplasma marginale str. Florida] Length = 315 Score = 200 bits (507), Expect = 2e-49, Method: Composition-based stats. Identities = 91/273 (33%), Positives = 145/273 (53%), Gaps = 13/273 (4%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ + TWNVNS+R R+ +L + + E++ DI LQETK D FP L+ L Y G Sbjct: 39 RMIRILTWNVNSVRKRVAHLCSVLTEHHVDIALLQETKCTDDQFPLAELEDLGYKCYIHG 98 Query: 62 QKSYNGVAILSKYQPIEIVTH-------------LPGDDLDVQARFIEATFTINTQTLRI 108 QKS NGVAILSKY + + + G +AR++E +R+ Sbjct: 99 QKSRNGVAILSKYPIVGELCNTVFDAEEEIGTVQDTGSYSVTEARYLECLVDYQDVKVRV 158 Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168 ++Y+P+G + + + K+++++ + L E+ L+ GDYN+ P D Y+ Sbjct: 159 ASVYVPNGQEVDTETFVYKLNFLRCLKARLLKLLAREDWLVIGGDYNVAPDDIDVYDAQA 218 Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 + CF + R +++ ++GFTDA R H+ +S+W+Y SW +N+G+RIDH++L Sbjct: 219 LDGKLCFHPKERAGLREILHLGFTDAFRILHEGKQEFSWWNYREGSWQRNRGMRIDHLLL 278 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 SP A L I + RG PSDH PV+ L Sbjct: 279 SPNAVDKLVECSILSSVRGLESPSDHAPVMCVL 311 >gi|241204226|ref|YP_002975322.1| exodeoxyribonuclease III Xth [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240858116|gb|ACS55783.1| exodeoxyribonuclease III Xth [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 264 Score = 200 bits (507), Expect = 3e-49, Method: Composition-based stats. Identities = 113/267 (42%), Positives = 162/267 (60%), Gaps = 5/267 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+NVN I R+ L W+KE+ PD++CLQE KT+D FP + ++ Y GQ+ Sbjct: 1 MKIATYNVNGINGRLDILLRWLKEDVPDVVCLQELKTDDAGFPRKEIERAGYGAIWHGQR 60 Query: 64 SYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 S+NGVAIL+K PI LPGD D +R+IEA + +G LYLP+GNP Sbjct: 61 SWNGVAILAKGKTPILTRRGLPGDPDDTHSRYIEAAVDG----ILVGCLYLPNGNPFPGA 116 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K++ K+ W +R +A++ LEL P I AGD+N++P D Y P W +DA F EVR++ Sbjct: 117 KFEYKLRWFRRLQDYAAELLELGVPSILAGDFNVMPTEIDVYKPERWLDDALFRPEVRKA 176 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 + L G+TDA+R H +Y+FW Y+ +S+ ++ G+RIDH +LSP LL A + Sbjct: 177 YAHLVAQGWTDAVRHLHPEERIYTFWRYWRNSFERDAGLRIDHFLLSPAVAPLLRWATVR 236 Query: 243 TKPRGWTKPSDHTPVIVSLDIPEPRKK 269 KPRGW SDH PV++ LD+ E Sbjct: 237 KKPRGWEHTSDHAPVMIELDVSEAGAD 263 >gi|295699065|ref|YP_003606958.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1002] gi|295438278|gb|ADG17447.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1002] Length = 269 Score = 200 bits (507), Expect = 3e-49, Method: Composition-based stats. Identities = 104/272 (38%), Positives = 153/272 (56%), Gaps = 5/272 (1%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 M+ + +AT+N+N IR+R L W++ PD++CLQE K D FP + L+ Y Sbjct: 1 MAKLRIATFNINGIRSRQAALLQWLEREAPDVVCLQELKAVDSAFPVDALREAGYGSVWQ 60 Query: 61 GQKSYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 GQ ++NGVAIL+K P+E LPG + D +R+IEA + I LYLP+GNP Sbjct: 61 GQSAWNGVAILAKGDAPLERRRGLPGFEDDTHSRYIEAAVGG----VLIVCLYLPNGNPQ 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K+D K++W + A+Q E P++ AGD+N++P D YNP W DA E Sbjct: 117 PGPKFDYKLAWFDHLIAHAAQLYESGHPVVIAGDFNVVPTDEDIYNPRSWLKDALLQPES 176 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R+ ++KL G+TDA+R +Y+FWDY+ W N G+RIDH++LS + L +A Sbjct: 177 RERYRKLLAQGWTDALRTHFGDERVYTFWDYFRRHWDTNSGLRIDHLLLSADLAPRLRNA 236 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271 +D G SDH P + L++ RKK+ Sbjct: 237 GVDRWVCGEPHASDHAPTWIELEMGAGRKKKS 268 >gi|94971952|ref|YP_593992.1| exodeoxyribonuclease III (xth) [Deinococcus geothermalis DSM 11300] gi|94554003|gb|ABF43918.1| exodeoxyribonuclease III (xth) [Deinococcus geothermalis DSM 11300] Length = 254 Score = 200 bits (507), Expect = 3e-49, Method: Composition-based stats. Identities = 80/258 (31%), Positives = 138/258 (53%), Gaps = 8/258 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+NS+ R+ + ++ + PD++ LQETK D+ FP E L++L Y GQK Sbjct: 1 MKLATWNINSLNVRLPQV---LETHRPDVLALQETKVVDERFPLEPLEALGYAAAFAGQK 57 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YN V +L++ + +PG + + + + +R+ LY+P+G S K Sbjct: 58 TYNSVDLLARAPLEAVQMGIPGLEDEQRRVLVATVGG-----VRVVCLYVPNGQAPHSEK 112 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K++W+ + L E L GD+N+ P+ D +NP W + R++F Sbjct: 113 YHYKLAWLDAAHAWLRDELAAHERLAVLGDFNVAPEDRDVHNPKRWAGQVLVSGPEREAF 172 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + L ++GF DA R + S+W+Y A ++ +N G+RIDH+++SP + + +D Sbjct: 173 RGLLDVGFQDAFRLFEEPPGALSWWNYGALAFPRNWGLRIDHVLVSPALAQVCQACWVDR 232 Query: 244 KPRGWTKPSDHTPVIVSL 261 +PR +PSDH PV+ Sbjct: 233 EPRAHERPSDHAPVVAEF 250 >gi|94313832|ref|YP_587041.1| exodeoxyribonuclease III [Cupriavidus metallidurans CH34] gi|93357684|gb|ABF11772.1| Exodeoxyribonuclease III [Cupriavidus metallidurans CH34] Length = 283 Score = 200 bits (507), Expect = 3e-49, Method: Composition-based stats. Identities = 104/275 (37%), Positives = 158/275 (57%), Gaps = 5/275 (1%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 M + +AT+N+N I AR+ +L AW++ PD+ CLQE K D++FP L + Y Sbjct: 1 MGHLKIATFNINGIHARLPSLLAWLEREQPDVACLQELKAVDESFPVAELHAAGYGAVWQ 60 Query: 61 GQKSYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 GQKS+NGVAIL+K P+E+ LPGD D Q+R+IEA + + LYLP+GNP Sbjct: 61 GQKSWNGVAILAKGSDPVEVRRGLPGDAADTQSRYIEAAVAG----VLVACLYLPNGNPQ 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K++ K++W +R +R AS P++ AGD+N++P D YNP W DA Sbjct: 117 PGPKFEYKLAWFERLIRHASTLYASGHPVVLAGDFNVVPTDDDIYNPRSWLKDALLQPAS 176 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R+ +++L G+TDA+R + +Y+FWDY+ W K+ G+RIDH++LS + A Sbjct: 177 RECYRQLLEQGWTDALRTRYPDTRIYTFWDYFRQHWQKDSGLRIDHLLLSRSLAQHMRDA 236 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDST 274 +D RG SDH P V +++ + + +T Sbjct: 237 GVDKWVRGEPHASDHAPAWVEIEMGAEAEARTKTT 271 >gi|15599367|ref|NP_252861.1| nuclease [Pseudomonas aeruginosa PAO1] gi|107103689|ref|ZP_01367607.1| hypothetical protein PaerPA_01004760 [Pseudomonas aeruginosa PACS2] gi|218889499|ref|YP_002438363.1| putative nuclease [Pseudomonas aeruginosa LESB58] gi|254237052|ref|ZP_04930375.1| hypothetical protein PACG_03084 [Pseudomonas aeruginosa C3719] gi|254242856|ref|ZP_04936178.1| hypothetical protein PA2G_03623 [Pseudomonas aeruginosa 2192] gi|9950380|gb|AAG07559.1|AE004833_10 probable nuclease [Pseudomonas aeruginosa PAO1] gi|126168983|gb|EAZ54494.1| hypothetical protein PACG_03084 [Pseudomonas aeruginosa C3719] gi|126196234|gb|EAZ60297.1| hypothetical protein PA2G_03623 [Pseudomonas aeruginosa 2192] gi|218769722|emb|CAW25482.1| probable nuclease [Pseudomonas aeruginosa LESB58] Length = 266 Score = 200 bits (507), Expect = 3e-49, Method: Composition-based stats. Identities = 104/270 (38%), Positives = 156/270 (57%), Gaps = 5/270 (1%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 M + +AT+NVN I+ R+ L AW++ PDI+CLQE KT D FP L+ Y Sbjct: 1 MDTLKIATFNVNGIQTRLAALLAWLEREAPDIVCLQELKTPDARFPAAALEKAGYGAIWQ 60 Query: 61 GQKSYNGVAILSKY-QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 GQ ++NGVAIL++ QP+E+ LPG+ D +R++EA L + +LYLP+GNP Sbjct: 61 GQSAWNGVAILARDSQPLEVRRGLPGNASDPHSRYLEAAVDG----LLVASLYLPNGNPQ 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K+D K++W + +R A++ +E P++ AGD+N++P D Y+ W+ DA E Sbjct: 117 PGPKFDYKLAWFEHLIRHAAELMESGHPVVLAGDFNVVPSDFDIYDTRSWKKDALLQPES 176 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R+ F++L G+ DA+R LY+FWDY+ W ++ G+RIDH++LS L A Sbjct: 177 RECFERLLRQGWVDALRQRFPDRRLYTFWDYFRQHWQRDAGLRIDHLLLSASLADHLEDA 236 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKK 269 +D RG SDH P VSL P ++ Sbjct: 237 GVDRWVRGEEHASDHAPAWVSLRRPSEPRR 266 >gi|255034710|ref|YP_003085331.1| exodeoxyribonuclease III Xth [Dyadobacter fermentans DSM 18053] gi|254947466|gb|ACT92166.1| exodeoxyribonuclease III Xth [Dyadobacter fermentans DSM 18053] Length = 261 Score = 200 bits (507), Expect = 3e-49, Method: Composition-based stats. Identities = 96/258 (37%), Positives = 144/258 (55%), Gaps = 3/258 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+N+N + R+ L W++E PD++CLQE K FP L Y+ GQK Sbjct: 1 MKIATYNINGVNGRLPVLLKWLEEAKPDVVCLQELKAPQDKFPERALLDAGYNSIWHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVAILSK PI+ V + + + LYLP+GNP K Sbjct: 61 MWNGVAILSKDLPIQEVR---NSLPGDDSDLHSRYIEAIVGRMLVCCLYLPNGNPAPGPK 117 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 +D K++W KR + A L E P++ AGDYN+IP+ D Y P W ++A F E R+++ Sbjct: 118 FDYKMAWFKRLKKHAKYLLSEEVPVVLAGDYNVIPKEKDVYKPERWVDNALFFPEPRKAY 177 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 ++L G+ D+IR H +Y+FWDY +++ +N G+R+DH++LSP+ L +A +D Sbjct: 178 KELVGQGWIDSIRHLHPDETIYTFWDYLRNAYGRNAGLRLDHLLLSPQIAPRLVAAGVDK 237 Query: 244 KPRGWTKPSDHTPVIVSL 261 RGW K SDH P + L Sbjct: 238 HVRGWEKSSDHAPTWIIL 255 >gi|226941364|ref|YP_002796438.1| XthA [Laribacter hongkongensis HLHK9] gi|226716291|gb|ACO75429.1| XthA [Laribacter hongkongensis HLHK9] Length = 255 Score = 200 bits (507), Expect = 3e-49, Method: Composition-based stats. Identities = 87/258 (33%), Positives = 128/258 (49%), Gaps = 3/258 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS++ R+ + W+ N D++CLQE K E FP +++ Y GQK Sbjct: 1 MQLATWNVNSLKVRLPQVLDWLGSNPVDVLCLQELKLEQDKFPLADIEAAGYRAVWLGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAIL + + P + +R+ Y +G + S K Sbjct: 61 TYNGVAILVRAPLAPLE---PVAGMPGYDDPQARVIAATIDDVRVVCAYCVNGEAVDSDK 117 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W R + + E L+ GD+NI P D Y+P W ++ RQ+F Sbjct: 118 YRYKLEWFARLHAYLAAERERHPKLVLTGDFNIAPDDRDVYSPESWAGKVLCSVPERQAF 177 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 L +G DA R HD YS+WDY + ++KG+RIDH++LS + L + ID Sbjct: 178 GDLLGLGLVDAFRQLHDGDGHYSWWDYRQGMFRRDKGLRIDHVLLSAPLAASLEACHIDK 237 Query: 244 KPRGWTKPSDHTPVIVSL 261 PRGW +PSDH PV+ Sbjct: 238 VPRGWERPSDHAPVVARF 255 >gi|284007473|emb|CBA72938.1| exodeoxyribonuclease III [Arsenophonus nasoniae] Length = 269 Score = 200 bits (507), Expect = 3e-49, Method: Composition-based stats. Identities = 91/268 (33%), Positives = 129/268 (48%), Gaps = 8/268 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+NS+RARIH L A I+++ PD+I LQETK +D FP E L L YHI GQK Sbjct: 1 MKFVSFNINSLRARIHQLEAIIEKHQPDVIGLQETKVDDNAFPLEQLNQLGYHICYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122 ++ GVA+ K +PI I PGDD+D Q R I A + I N Y P G Sbjct: 61 AHYGVALFCKQKPITIQKGFPGDDIDAQRRIIMADIETEQGIITIINGYFPQGECRDHPT 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE------NDACFT 176 K+ K + + + L + +I GD NI P HD I F Sbjct: 121 KFAAKAKFYQDLQLYLQSNLSPQSHIIIMGDMNISPTDHDIGIGEINRKRWLSAGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ KL++ G D R + +S++DY + + N+G+RID I+ S + Sbjct: 181 PEEREWMDKLKSWGLIDTYRQQNPEITDQFSWFDYRSKGFVDNRGLRIDLILASSSLFAC 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 ID R KPSDH P+ ++ Sbjct: 241 CGETGIDYDIRSMEKPSDHAPIWAKFEL 268 >gi|303258098|ref|ZP_07344106.1| exodeoxyribonuclease III [Burkholderiales bacterium 1_1_47] gi|330998688|ref|ZP_08322417.1| exodeoxyribonuclease III [Parasutterella excrementihominis YIT 11859] gi|302859117|gb|EFL82200.1| exodeoxyribonuclease III [Burkholderiales bacterium 1_1_47] gi|329576427|gb|EGG57939.1| exodeoxyribonuclease III [Parasutterella excrementihominis YIT 11859] Length = 265 Score = 200 bits (507), Expect = 3e-49, Method: Composition-based stats. Identities = 87/266 (32%), Positives = 143/266 (53%), Gaps = 4/266 (1%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 MS+ T+ TWNVNS++ R + ++KE I+CLQE K ++ + + + Y ++ Sbjct: 1 MSI-TITTWNVNSLKVRQPQVLDFLKETENSILCLQELKMQEADIDASAFKEIGYTLDAF 59 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIE---ATFTINTQTLRIGNLYLPHGN 117 GQK+YNGVA + + + + + AT + + LR+ N Y P+G Sbjct: 60 GQKTYNGVATILRDPLTFLPDEEVRNIPGFEDPQSRLLAATVRVGCERLRVINGYFPNGE 119 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + S K+ K+SW++ + +LE L+ GD+NI P+ D ++P W T Sbjct: 120 TVESEKFPYKLSWLEALAEWLPSQLEQYPNLVLLGDFNIAPEDRDVWDPESWAESVLCTP 179 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 + R++FQ+L ++G TD+ RA YS+WDY ++ +N+G+RIDHI++S S Sbjct: 180 KAREAFQRLIDLGLTDSFRAFEQPEKSYSWWDYRMMAFRRNRGLRIDHILISKALVSKNL 239 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263 I K RG +PSDH PV ++LD+ Sbjct: 240 GVEIHKKVRGNERPSDHAPVTLTLDL 265 >gi|116251598|ref|YP_767436.1| exodeoxyribonuclease [Rhizobium leguminosarum bv. viciae 3841] gi|115256246|emb|CAK07327.1| putative exodeoxyribonuclease [Rhizobium leguminosarum bv. viciae 3841] Length = 264 Score = 200 bits (507), Expect = 3e-49, Method: Composition-based stats. Identities = 113/267 (42%), Positives = 163/267 (61%), Gaps = 5/267 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+NVN I R+ L+ W+KE+ PD++CLQE KT+D FP + ++ Y GQ+ Sbjct: 1 MKIATYNVNGINGRLDILSRWLKEDTPDVVCLQELKTDDARFPRKEIERAGYGAIWHGQR 60 Query: 64 SYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 S+NGVAIL+K PI LPGD D +R+IE + +G LYLP+GNP Sbjct: 61 SWNGVAILAKGKIPILTRRGLPGDPDDTHSRYIEGAVDG----ILVGCLYLPNGNPFPGA 116 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K+D K+ W +R +A++ LELE P I AGD+N++P D Y P W +DA F EVR++ Sbjct: 117 KFDYKLRWFRRLHEYAAELLELEVPSILAGDFNVMPTEIDVYKPERWLDDALFRPEVRRA 176 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 + L G+TDA+R H +Y+FW Y+ +S+ ++ G+RIDH +LSP L SA + Sbjct: 177 YADLVAQGWTDAVRHLHPEERIYTFWKYWRNSFERDAGLRIDHFLLSPAVAPWLRSATVR 236 Query: 243 TKPRGWTKPSDHTPVIVSLDIPEPRKK 269 KPRGW SDH PV++ LD+ + Sbjct: 237 KKPRGWEHTSDHAPVMIELDVSKAGAD 263 >gi|308187049|ref|YP_003931180.1| Exonuclease III [Pantoea vagans C9-1] gi|308057559|gb|ADO09731.1| Exonuclease III [Pantoea vagans C9-1] Length = 272 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 79/267 (29%), Positives = 127/267 (47%), Gaps = 8/267 (2%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 ++ ++N+N +RAR H L A ++++ PD+I LQETK D FP E + L YH+ GQ Sbjct: 4 LMKFVSFNINGLRARPHQLQALVEQHQPDVIGLQETKVHDDMFPLEEVAKLGYHVFYHGQ 63 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K + GVA+L+K QP+ + P DD + Q R I A + + N Y P G Sbjct: 64 KGHYGVALLTKAQPVSVSRGFPDDDEESQRRLIMAEIPSPIGDITVINGYFPQGESRDHP 123 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175 K+ K + + R + L ++P++ GD NI + + F Sbjct: 124 TKFPAKEKFYRDLQRLLTDDLPADKPVLVMGDMNISSTDLDIGIGEESRKRWLRTGKCSF 183 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R+ +L G D R + +S++DY + + N+G+RID ++ S + Sbjct: 184 LPEEREWMDRLLGWGLVDTWREHNPEVADRFSWFDYRSKGFDDNRGLRIDLVLASKNLAA 243 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261 + ID + RG KPSDH P+ + Sbjct: 244 HCVESGIDYEIRGMEKPSDHAPIWSTF 270 >gi|86357361|ref|YP_469253.1| exodeoxyribonuclease III protein [Rhizobium etli CFN 42] gi|86281463|gb|ABC90526.1| exodeoxyribonuclease III protein [Rhizobium etli CFN 42] Length = 260 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 113/260 (43%), Positives = 163/260 (62%), Gaps = 5/260 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+NVN I R+ N+ W+KE+ PD+ CLQE KT+D FP + L+ Y GQ+ Sbjct: 1 MKIATYNVNGINGRLTNVLRWLKEDGPDVACLQELKTDDARFPRKELERAGYGAVWHGQR 60 Query: 64 SYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 S+NGVAIL+K PI LPGD D +R+IEA IG LYLP+GNP Sbjct: 61 SWNGVAILAKGKTPILTRRGLPGDPDDTHSRYIEAAVDGM----LIGCLYLPNGNPFPGA 116 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K++ K+ W +R +A++ LE+E P I AGD+N++P D Y P W++DA F EVR + Sbjct: 117 KFEYKLRWFRRLSAYAAELLEIEVPSILAGDFNVMPTEIDVYKPERWQDDALFRPEVRTA 176 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 + +L G+TDA+R H +Y+FW Y+ +S+ ++ G+RIDH++LSP L SA + Sbjct: 177 YAQLVAQGWTDAVRHLHPGERIYTFWKYWRNSFERDAGLRIDHLLLSPTVAPWLRSASVR 236 Query: 243 TKPRGWTKPSDHTPVIVSLD 262 KPRGW + SDH PV++ L+ Sbjct: 237 RKPRGWEQTSDHAPVMIELE 256 >gi|90415898|ref|ZP_01223831.1| exodeoxyribonuclease III [marine gamma proteobacterium HTCC2207] gi|90332272|gb|EAS47469.1| exodeoxyribonuclease III [marine gamma proteobacterium HTCC2207] Length = 271 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 89/268 (33%), Positives = 129/268 (48%), Gaps = 9/268 (3%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64 + ++NVN +R+R+H L A I +++PDII LQETK D+ FP + + L Y + GQK Sbjct: 4 RIVSFNVNGLRSRLHQLEAMINQHSPDIIGLQETKVSDEEFPHQAIADLGYEVNFHGQKG 63 Query: 65 YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST-K 123 + GVA+LSK I I P D D Q R I ++IN QT+ + N Y P G K Sbjct: 64 HYGVALLSKAPAINITRGYPSDGEDAQRRMIHGQYSINGQTVHVINGYFPQGESRAHPTK 123 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACFTL 177 + K + L + ++ + GD N+ D I F Sbjct: 124 FPAKEKFYADLLAYLDSNFNADDLVSVMGDMNVAANDIDVGIKPENAKRWIKTGKCAFLP 183 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW--SKNKGIRIDHIMLSPEATSL 235 E RQ Q L + G D+ R + YS++DY + + +G+RID I+ SP L Sbjct: 184 EERQWLQNLLDWGLQDSFREQNAADDSYSWFDYRSKGFELEPKRGLRIDLILASPSLMKL 243 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + IDT RG+ KPSDH P+ L + Sbjct: 244 VTETGIDTAARGFEKPSDHCPIWADLRL 271 >gi|269958811|ref|YP_003328599.1| exodeoxyribonuclease 3 [Anaplasma centrale str. Israel] gi|269848641|gb|ACZ49285.1| exodeoxyribonuclease 3 [Anaplasma centrale str. Israel] Length = 295 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 98/273 (35%), Positives = 143/273 (52%), Gaps = 13/273 (4%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ + TWNVNSIR R+ +L + + E+ DI LQETK D FP L+SL Y G Sbjct: 8 RMIRILTWNVNSIRKRVDHLRSVLSEHRIDIALLQETKCTDDQFPLAELESLGYKCYIHG 67 Query: 62 QKSYNGVAILSKYQPIEIVTH-------------LPGDDLDVQARFIEATFTINTQTLRI 108 QKS NGVAILSKY I V + G +AR++E +R+ Sbjct: 68 QKSRNGVAILSKYPIIGEVCNTIFDSAEGISAAQDTGSYSVTEARYLECLVDCREVKIRV 127 Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168 ++Y+P+G + + + K+++++ + LE EE ++ GDYN+ P+ D Y+ Sbjct: 128 ASVYVPNGQEVDTETFVYKLNFLRSLKARMLKLLEGEEWIVVGGDYNVAPECMDVYDAQA 187 Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 + CF E R + + GFTDA R H +S+W+Y SW +N+G+RIDHI+L Sbjct: 188 LDGKLCFHPEERARLRAILYSGFTDAFRVLHGGKQEFSWWNYREGSWQRNRGMRIDHILL 247 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 SP A L I + RG PSDH PV+ L Sbjct: 248 SPNAVDRLVKCDILSSIRGLESPSDHAPVVCIL 280 >gi|188994231|ref|YP_001928483.1| exodeoxyribonuclease III [Porphyromonas gingivalis ATCC 33277] gi|188593911|dbj|BAG32886.1| exodeoxyribonuclease III [Porphyromonas gingivalis ATCC 33277] Length = 254 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 83/261 (31%), Positives = 139/261 (53%), Gaps = 12/261 (4%) Query: 4 VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60 + + ++NVN +RA + L W++E NPD++CLQETK ++ F E ++L Y ++ + Sbjct: 1 MKIISYNVNGLRAAMKKDLIGWLREENPDVLCLQETKMQNDQFEKEEFEALGYRSYLFSA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GVAI++K+QP I + ++ D + RFI A F L I ++Y P G Sbjct: 61 QKKGYSGVAIITKHQPDHIEYGMGMEEYDAEGRFIRADFG----DLSIVSVYHPSG-TSG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K+ W++ F + ++ + LI GDYNI +P D ++PI ++ F E R Sbjct: 116 DERQAFKMVWLEHFQSYVNELRKSRPNLILCGDYNICHEPIDIHDPIRNAKNSGFLPEER 175 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + + G+ D R TH LYS+W Y + S+NKG RID+ M++ + A Sbjct: 176 EWMSRFLADGYVDTFRHTHPELVLYSWWSYRFQARSRNKGWRIDYCMVTNNLADRIKGAY 235 Query: 241 IDTKPRGWTKPSDHTPVIVSL 261 I + SDH P+++ + Sbjct: 236 ILNEA----VHSDHCPIVLEI 252 >gi|34540111|ref|NP_904590.1| exodeoxyribonuclease III [Porphyromonas gingivalis W83] gi|34396422|gb|AAQ65489.1| exodeoxyribonuclease III [Porphyromonas gingivalis W83] Length = 254 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 83/261 (31%), Positives = 139/261 (53%), Gaps = 12/261 (4%) Query: 4 VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60 + + ++NVN +RA + L W++E NPD++CLQETK ++ F E ++L Y ++ + Sbjct: 1 MKIISYNVNGLRAAMKKDLIGWLREENPDVLCLQETKMQNDQFEKEEFEALGYRSYLFSA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GVAI++K+QP I + ++ D + RFI A F L I ++Y P G Sbjct: 61 QKKGYSGVAIITKHQPDHIEYGMGMEEYDAEGRFIRADFG----DLSIVSVYHPSG-TSG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K+ W++ F + ++ + LI GDYNI +P D ++PI ++ F E R Sbjct: 116 DERQAFKMVWLEHFQSYVNELRKSRPNLILCGDYNICHEPIDIHDPIRNAKNSGFLPEER 175 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + + G+ D R TH LYS+W Y + S+NKG RID+ M++ + A Sbjct: 176 EWMSRFLADGYVDTFRHTHPELVLYSWWSYRFQARSRNKGWRIDYCMVTNNLADRIKGAD 235 Query: 241 IDTKPRGWTKPSDHTPVIVSL 261 I + SDH P+++ + Sbjct: 236 ILNEA----VHSDHCPIVLEI 252 >gi|87303215|ref|ZP_01086008.1| exodeoxyribonuclease III [Synechococcus sp. WH 5701] gi|87282110|gb|EAQ74071.1| exodeoxyribonuclease III [Synechococcus sp. WH 5701] Length = 283 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 85/264 (32%), Positives = 131/264 (49%), Gaps = 3/264 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+R+R+ + AW++ P+++CLQETK ED FP L Y GQK Sbjct: 1 MQIATWNVNSVRSRLEQVVAWLELERPEVLCLQETKVEDAAFPVGAFSDLGYSAVISGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL---RIGNLYLPHGNPIT 120 +YNGVAILS+ ++ D A + + + + R+ NLY+P+G+ + Sbjct: 61 AYNGVAILSRLPLEDVRIGFDALLPDEPAVALAEQKRVISARIEGVRVLNLYVPNGSALR 120 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 S KY K++W+ R+ + +P+ GD+NI D ++P + R Sbjct: 121 SEKYAYKLAWLACLERYLKVQDADGDPVCMVGDFNIALDDRDIHDPKRLSGGIMASDPER 180 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + + + D R +S+WDY + +W ++ G RIDHI LS E Sbjct: 181 DALRLALDERLADVFRLFEPERGHWSWWDYRSGAWDRDSGWRIDHIYLSQELQERATGCL 240 Query: 241 IDTKPRGWTKPSDHTPVIVSLDIP 264 I RG KPSDH PV+V + P Sbjct: 241 IHKAVRGNDKPSDHAPVVVQVQWP 264 >gi|194367742|ref|YP_002030352.1| exodeoxyribonuclease III [Stenotrophomonas maltophilia R551-3] gi|194350546|gb|ACF53669.1| exodeoxyribonuclease III [Stenotrophomonas maltophilia R551-3] Length = 258 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 88/262 (33%), Positives = 141/262 (53%), Gaps = 6/262 (2%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 M+ + +A+WNVNS+ R+ +L W+KE PDI+ +QETK ED FP L + Y Sbjct: 1 MAPMKIASWNVNSLNVRLPHLEQWLKEFGPDIVGIQETKLEDHKFPDSALIAAGYRSVFA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 GQK+YNGVA+LS+ ++ +PG + + + LR+ NLY+ +G I Sbjct: 61 GQKTYNGVALLSREPAQDVQIGIPGFEDEQKRVI-----AGTFGDLRVINLYVVNGQDIG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI-IWENDACFTLEV 179 + KY+ K+ W++ + ++ L+ LI GD+NI P D ++P EN + Sbjct: 116 TDKYEYKLRWLEAVHAWIAEELQRHPKLIVMGDFNIAPDARDVHDPEVWNENHILTSTAE 175 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R + KL +G D R +D ++S+WDY A + ++ G+RID ++S ++ Sbjct: 176 RGALNKLLQLGLHDGFRLHNDEAGVFSWWDYRAAGFRRDLGLRIDLTLVSDALKGSAVAS 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261 ID +PR W +PSDH P V + Sbjct: 236 GIDREPRTWERPSDHAPAWVQI 257 >gi|302525892|ref|ZP_07278234.1| exodeoxyribonuclease III [Streptomyces sp. AA4] gi|302434787|gb|EFL06603.1| exodeoxyribonuclease III [Streptomyces sp. AA4] Length = 265 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 77/265 (29%), Positives = 129/265 (48%), Gaps = 1/265 (0%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 V VATWNVNSI R+ + W+ PD++CLQE K + FP + + + Y + G Sbjct: 2 TVRVATWNVNSIVPRLPRVLDWLDNTAPDVLCLQELKNTTEAFPADEIVARGYEVAAYGL 61 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 +NGVAILSK ++V LPG+ A +R+ ++Y+P+G + Sbjct: 62 GRWNGVAILSKIGLDDVVRGLPGEPGFDGKAEARAIGATCGG-IRVWSVYVPNGREPQNP 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 Y K+ W ++ + L P GD+N+ P D ++ ++ T R + Sbjct: 121 HYAYKLEWFEKLSDLVGEELRHARPFAVLGDFNVAPTDEDVWDISVFAESTHVTEPERAA 180 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 +KL++ G +D H +++WDY A ++ NKG+RID + + + + +D Sbjct: 181 LKKLRDAGLSDVFPRPLKYDHPFTYWDYRAGNFPNNKGMRIDLVYGNEVFAKAVTDSYVD 240 Query: 243 TKPRGWTKPSDHTPVIVSLDIPEPR 267 + R PSDH P++V L++ R Sbjct: 241 REARKGKGPSDHAPIVVDLELDPER 265 >gi|237743089|ref|ZP_04573570.1| exodeoxyribonuclease III [Fusobacterium sp. 7_1] gi|229433385|gb|EEO43597.1| exodeoxyribonuclease III [Fusobacterium sp. 7_1] Length = 253 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 76/263 (28%), Positives = 115/263 (43%), Gaps = 13/263 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN IRA I + E N DI CLQETK E L+ + + + Sbjct: 1 MKLISWNVNGIRAAIKKGFLDYFNEQNADIFCLQETKLSAGQLDLE-LKGYHQYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +P+ + L ++ D + R I F + Sbjct: 60 KGYSGTAIFTKQEPLSVSYGLGIEEHDKEGRVITLEFEKFYMVTVYTPNSKDELLRLDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + R + LE ++P++ GD N+ + D NP +A FT E R Sbjct: 120 M------IWEDEFRKYLKNLEKKKPVVVCGDLNVAHKEIDLKNPKTNRRNAGFTDEERGK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L + GF D R + +YS+W Y + N G RID+ ++S E L A I Sbjct: 174 FTELLDSGFIDTFRYFYPNLEQVYSWWSYRGRARENNAGWRIDYFVVSKELEKNLVDAEI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLDIP 264 T+ G SDH PV++ LD+ Sbjct: 234 HTQIEG----SDHCPVVLFLDLD 252 >gi|15602556|ref|NP_245628.1| exonuclease III [Pasteurella multocida subsp. multocida str. Pm70] gi|12720975|gb|AAK02775.1| unknown [Pasteurella multocida subsp. multocida str. Pm70] Length = 267 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 80/267 (29%), Positives = 122/267 (45%), Gaps = 8/267 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V ++N+N +RAR H L A I++ PD++ LQE K D+ FP+E ++ L YH+ GQK Sbjct: 1 MKVISFNINGLRARPHQLEAVIEKYQPDVLGLQEIKVADEMFPYELVEHLGYHVFHHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122 + GVA+L+K P + P D + Q R I A + L + N Y P G T Sbjct: 61 GHYGVALLTKQAPKAVRKGFPTDSEEAQKRIIMADLETDFGLLTVINGYFPQGESRDHET 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + ++ Q P+I GD NI P + + F Sbjct: 121 KFPAKEKFYADLQQYLEQDHNANNPIIIMGDMNISPTDLDIGIGDENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +L G D R + + +S++DY + + N+G+RIDHI+ + + Sbjct: 181 PEEREWMNRLYGYGLVDTFRHLNPDVNDQFSWFDYRSKGFDDNRGLRIDHIIANHALAAR 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262 I R KPSDH PV Sbjct: 241 CVETGIALDIRAMEKPSDHAPVWAVFK 267 >gi|163802095|ref|ZP_02195991.1| exodeoxyribonuclease III [Vibrio sp. AND4] gi|159174236|gb|EDP59044.1| exodeoxyribonuclease III [Vibrio sp. AND4] Length = 268 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 79/268 (29%), Positives = 130/268 (48%), Gaps = 9/268 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V ++N+N +RAR+H L A I ++ PD+I LQE K D+ FP + ++++ Y + GQK Sbjct: 1 MKVISFNINGLRARLHQLQALIDKHQPDVIGLQEIKVHDEAFPIKDVEAMGYKVYFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121 ++ GVA+L K +P+ + P ++ + + N + + + N Y P G+ I Sbjct: 61 AHYGVAMLCKQEPVSVQKGFPTDNEEHQKRMIMATFEDENGEKVTVLNGYFPQGDNIAHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175 TKY K + K + + + +E LI GD NI + F Sbjct: 121 TKYPYKRQFYKDLMTYLTDYHSNDEQLIVMGDINISSIDADIGIGEPNRKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R+ Q L + GF D R H +S++DY + + N+G+RID I+ +P Sbjct: 181 QPEEREWLQTLLSWGFEDTFRNLHPEVDDRFSWFDYRSRGFDDNRGLRIDVILATPSLAK 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + ID + RG KPSDH P+ + Sbjct: 241 KCIESDIDYELRGIEKPSDHAPIWSTFK 268 >gi|313109621|ref|ZP_07795568.1| putative nuclease [Pseudomonas aeruginosa 39016] gi|310882070|gb|EFQ40664.1| putative nuclease [Pseudomonas aeruginosa 39016] Length = 266 Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats. Identities = 103/270 (38%), Positives = 156/270 (57%), Gaps = 5/270 (1%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 M + +AT+NVN I+ R+ L AW++ PDI+CLQE KT D FP L+ Y Sbjct: 1 MDTLKIATFNVNGIQTRLAALLAWLEREAPDIVCLQELKTPDARFPAAALEKAGYGAIWQ 60 Query: 61 GQKSYNGVAILSKY-QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 GQ ++NGVAIL++ QP+E+ LPG+ D +R++EA L + +LYLP+GNP Sbjct: 61 GQSAWNGVAILARDSQPLEVRRGLPGNASDPHSRYLEAAVDG----LLVASLYLPNGNPQ 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K+D K++W + +R A++ +E P++ AGD+N++P D Y+ W+ DA E Sbjct: 117 PGPKFDYKLAWFEHLIRHAAELMESGHPVVLAGDFNVVPSDFDIYDTRSWKKDALLQPES 176 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R+ F++L G+ DA+R +Y+FWDY+ W ++ G+RIDH++LS L A Sbjct: 177 RECFERLLRQGWVDALRQRFPDRRIYTFWDYFRQHWQRDAGLRIDHLLLSASLADHLEDA 236 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKK 269 +D RG SDH P VSL P ++ Sbjct: 237 GVDRWVRGEEHASDHAPAWVSLRRPSEPRR 266 >gi|120401745|ref|YP_951574.1| exodeoxyribonuclease III Xth [Mycobacterium vanbaalenii PYR-1] gi|119954563|gb|ABM11568.1| Exodeoxyribonuclease III [Mycobacterium vanbaalenii PYR-1] Length = 272 Score = 199 bits (506), Expect = 4e-49, Method: Composition-based stats. Identities = 86/270 (31%), Positives = 131/270 (48%), Gaps = 12/270 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSIRAR+ + W++ + D++ +QETK D FP +L Y I CG Sbjct: 1 MRLATWNVNSIRARVDRVTDWLERADVDVLAMQETKCSDDQFPTMPFAALGYEIVHCGFN 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT-----LRIGNLYLPHGNP 118 +NGVAI S+ ++ G +EA +R+ +LY+P+G Sbjct: 61 QWNGVAIASRVGIDDVEVGFDGQPTWNDKPEVEAAAEARALGATCGGVRVWSLYVPNGRT 120 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEE--PLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + S Y K+ W+ AS LE P+ GD+NI P D ++ ++++ T Sbjct: 121 VDSPHYVYKLEWLAALRDTASSWLESNPSAPIALVGDWNIAPIDDDVWDISLFQDSTHVT 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 R +F + + GFTD +R +++WDY + KN+G+RID I+ SP + Sbjct: 181 EPERAAFNAVVDAGFTDVVRPFTPGPGTFTYWDYTQLRFPKNRGMRIDFILGSPALAERV 240 Query: 237 HSARIDTKPRGWTK-----PSDHTPVIVSL 261 A I R K PSDH PV+V L Sbjct: 241 VHAEIARDERKTGKNRVGSPSDHAPVVVDL 270 >gi|294788414|ref|ZP_06753657.1| exodeoxyribonuclease III [Simonsiella muelleri ATCC 29453] gi|294483845|gb|EFG31529.1| exodeoxyribonuclease III [Simonsiella muelleri ATCC 29453] Length = 256 Score = 199 bits (506), Expect = 4e-49, Method: Composition-based stats. Identities = 89/260 (34%), Positives = 130/260 (50%), Gaps = 4/260 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ R + W+ PD++ LQE K E FP LQ + ++ GQK Sbjct: 1 MKIATWNVNSLNVRQPQVMEWLMNEQPDVLALQELKLEQDKFPLAALQMMGWNAVWSGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVA++S+++ ++ T LP D Q R I AT +R+ N+Y +G + S K Sbjct: 61 TYNGVALISRHELTDVQTGLPQMPNDPQRRVIVATVNG----VRVINVYCVNGEALDSPK 116 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K W F L L+ GD+NI P D Y+P W + E R F Sbjct: 117 FAYKREWFAALTHFVRDELARYADLVLLGDFNIAPTDEDVYDPKKWHEQIHCSSEERSWF 176 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + L ++G TD +R + Y++WDY + K G+RIDHI++S L +DT Sbjct: 177 KNLLDLGLTDGLRHANPIGKFYTWWDYRGAMFEKGLGLRIDHILVSDNLIDKLQQVVVDT 236 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 R +PSDH PV I Sbjct: 237 HTRANERPSDHAPVHADFQI 256 >gi|300784682|ref|YP_003764973.1| exodeoxyribonuclease III [Amycolatopsis mediterranei U32] gi|299794196|gb|ADJ44571.1| exodeoxyribonuclease III [Amycolatopsis mediterranei U32] Length = 258 Score = 199 bits (505), Expect = 4e-49, Method: Composition-based stats. Identities = 73/260 (28%), Positives = 131/260 (50%), Gaps = 2/260 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSI R+ + +++E PD++CLQE K + FP +++L Y + G Sbjct: 1 MRIATWNVNSIVPRLPRVLGFLEETAPDVLCLQELKNTTEAFPAAEIEALGYEVAAYGLG 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGV I+S+ ++V LPG+ A A +R+ ++Y+P+G + Sbjct: 61 RWNGVGIVSRVGVSDVVRGLPGEPQFDGASEARAIGATCGG-VRVWSVYVPNGREPDNPH 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W+ + + GD+N+ P D ++ ++ T R++ Sbjct: 120 YAYKLEWLSSLHSLVASEVSDGPF-AVLGDFNVAPTDADVWDIAVFAESTHVTKPEREAL 178 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +L+++G +D H +++WDY A ++ NKG+RID + + TS + + +D Sbjct: 179 ARLRDLGLSDVFPRPLKYDHPFTYWDYRAGNFPNNKGMRIDLVYGNEAFTSAVTDSYVDR 238 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 R PSDH P++V LD+ Sbjct: 239 NARKGKGPSDHAPIVVDLDL 258 >gi|300777930|ref|ZP_07087788.1| possible exodeoxyribonuclease III [Chryseobacterium gleum ATCC 35910] gi|300503440|gb|EFK34580.1| possible exodeoxyribonuclease III [Chryseobacterium gleum ATCC 35910] Length = 259 Score = 199 bits (505), Expect = 4e-49, Method: Composition-based stats. Identities = 106/258 (41%), Positives = 154/258 (59%), Gaps = 3/258 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+NVN + R+ L W+KE +PDI+CLQE K + FP + + + Y GQK Sbjct: 1 MKIATYNVNGVNGRLPVLLKWLKEASPDIVCLQELKAPQERFPLQEINNAGYQAIWNGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 S+NGVAIL+K + I T + + I LYLP+GNP K Sbjct: 61 SWNGVAILAKNKEI---TEVQRSLPGDPDDIQSRYIEAIIDQMVICCLYLPNGNPYPGPK 117 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 +D K+SW+KRF + Q +++E P I GD+NIIP+P D + P WENDA + +EVR+++ Sbjct: 118 FDYKLSWLKRFKKRTDQLIKMELPAILIGDFNIIPEPIDVHKPERWENDALYRVEVRKAY 177 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + LQ G+ D+IR+ + +Y+FWDY ++ +N GIR+DHI+LSP S L S +D Sbjct: 178 KDLQKKGWLDSIRSLYPGEKIYTFWDYLYKAYDRNAGIRLDHILLSPYLQSRLQSGGVDR 237 Query: 244 KPRGWTKPSDHTPVIVSL 261 + RGW K SDH PV + L Sbjct: 238 QVRGWEKSSDHAPVWIEL 255 >gi|197335145|ref|YP_002156399.1| exodeoxyribonuclease III [Vibrio fischeri MJ11] gi|197316635|gb|ACH66082.1| exodeoxyribonuclease III [Vibrio fischeri MJ11] Length = 268 Score = 199 bits (505), Expect = 4e-49, Method: Composition-based stats. Identities = 79/268 (29%), Positives = 128/268 (47%), Gaps = 9/268 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V ++N+N +RAR+H L A I ++NPD+I LQE K ++ FP E ++++ Y + GQK Sbjct: 1 MKVISFNINGLRARLHQLQAIIDKHNPDVIGLQEIKVHNEMFPVEAVEAMGYKVYFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121 ++ GVA+L K +PI + + + + + + I N Y P G+ + Sbjct: 61 AHYGVAMLCKQEPISVQYGFDTDTEEHQKRMIMTTHQREDGSKVTIMNGYFPQGDNVKHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175 TK+ K + K + +E +I GD NI P + F Sbjct: 121 TKFPYKRQFYKDLMTHLHTHHTNDEEIIVMGDINISPIDADIGIGEPNAKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R+ Q L++ GF D R H +S++DY + + N+G+RID IM +P Sbjct: 181 QPEEREWLQTLKDWGFEDTFRNLHPEVTDQFSWFDYRSKGFVDNRGLRIDVIMATPTLAV 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + ID + RG KPSDH P+ + Sbjct: 241 KCTESGIDYELRGIEKPSDHAPIWSTFK 268 >gi|15965402|ref|NP_385755.1| exodeoxyribonuclease III protein [Sinorhizobium meliloti 1021] gi|307308792|ref|ZP_07588488.1| exodeoxyribonuclease III Xth [Sinorhizobium meliloti BL225C] gi|307317265|ref|ZP_07596706.1| exodeoxyribonuclease III Xth [Sinorhizobium meliloti AK83] gi|15074583|emb|CAC46228.1| Probable exodeoxyribonuclease III [Sinorhizobium meliloti 1021] gi|306897353|gb|EFN28098.1| exodeoxyribonuclease III Xth [Sinorhizobium meliloti AK83] gi|306900798|gb|EFN31409.1| exodeoxyribonuclease III Xth [Sinorhizobium meliloti BL225C] Length = 264 Score = 199 bits (505), Expect = 4e-49, Method: Composition-based stats. Identities = 110/269 (40%), Positives = 165/269 (61%), Gaps = 6/269 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+NVN + R+ L W++E +PD++CLQE K D FP + +++ Y GQK Sbjct: 1 MKIATYNVNGVNGRLGVLLRWLEEASPDVVCLQELKAPDPKFPVKAIEAAGYGAIWHGQK 60 Query: 64 SYNGVAILSKYQ-PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 S+NGVAIL++ + P LPGD D +R+IEA IG LYLP+GNP Sbjct: 61 SWNGVAILARDREPTLTRKGLPGDPDDTHSRYIEAAVEGM----VIGCLYLPNGNPYPGP 116 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K++ K++W R +A++ LEL+ P+I AGDYN++P D Y P W NDA F +EVR + Sbjct: 117 KFEYKLAWFHRLTAYAAELLELDVPVILAGDYNVMPTELDVYKPERWVNDALFRIEVRDA 176 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 + +L G+TDA+R H +Y+FWDY+ ++++++ G+RIDH++LSP T L +A +D Sbjct: 177 YHRLLEQGWTDALRQLHPGERVYTFWDYFRNAFARDAGLRIDHLLLSPHVTLRLSAAGVD 236 Query: 243 TKPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271 RGW SDH P + L P ++ Q Sbjct: 237 RHVRGWEHTSDHAPAWIELS-DGPAEEDQ 264 >gi|259419109|ref|ZP_05743026.1| exodeoxyribonuclease III [Silicibacter sp. TrichCH4B] gi|259345331|gb|EEW57185.1| exodeoxyribonuclease III [Silicibacter sp. TrichCH4B] Length = 333 Score = 199 bits (505), Expect = 4e-49, Method: Composition-based stats. Identities = 117/260 (45%), Positives = 161/260 (61%), Gaps = 10/260 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A++N+N I+AR++ LA W+ E PD+ LQE K+ D+ FP E + Y++ET GQK Sbjct: 1 MKIASFNINGIKARVNALADWLDEAQPDVAVLQEIKSVDEAFPREMFEERGYNVETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 S+NGVAILSK ++ LPGDD D QAR+IEAT + Q +RI LYLP+GNP+ Sbjct: 61 SFNGVAILSKLPLEDVRRGLPGDDSDEQARWIEAT-VVGKQAIRICGLYLPNGNPVALND 119 Query: 124 ---------YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 Y K+ W++R A++ + E P + AGDYNIIPQ D P W DA Sbjct: 120 DGTPVAGGKYAYKLGWMERLKARAAELMAEEMPALMAGDYNIIPQAEDAKRPEAWREDAL 179 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R +FQ++ N+GFT+A RA Y+FWDY A +W+++ GIRIDH +L+P+A Sbjct: 180 HRPESRAAFQRIVNLGFTEAFRARTRGPGHYTFWDYQAGAWNRDDGIRIDHFLLTPQAAD 239 Query: 235 LLHSARIDTKPRGWTKPSDH 254 LL +ID RG KPSDH Sbjct: 240 LLRDCQIDKDIRGREKPSDH 259 >gi|109898960|ref|YP_662215.1| exodeoxyribonuclease III [Pseudoalteromonas atlantica T6c] gi|109701241|gb|ABG41161.1| Exodeoxyribonuclease III [Pseudoalteromonas atlantica T6c] Length = 269 Score = 199 bits (505), Expect = 4e-49, Method: Composition-based stats. Identities = 79/268 (29%), Positives = 131/268 (48%), Gaps = 9/268 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N IRAR+H L A I ++ PDII LQE K + FP ++++ Y++ GQK Sbjct: 1 MKIISFNINGIRARLHQLQALIDKHQPDIIGLQEIKVHNDMFPVADVEAMGYNVYFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLD-VQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121 ++ GVA+L K +P ++ P DD D + + + N +T+R+ N Y P G + Sbjct: 61 AHYGVAMLCKKEPTDVQYGFPTDDEDAQRRMIMVSYPMPNGETVRVLNGYFPQGENRSHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175 TK+ K + + + + ++ +I GD NI + F Sbjct: 121 TKFPAKRKYYEDLSTYLNTHHTPDDNVIVMGDVNISHTDLDIGIGEPNRKRWLQTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R L + GFTD R + + +S++DY + + N+G+RID I+ + + Sbjct: 181 LPEERVWLNDLIDWGFTDGFRTLNPETNEHFSWFDYRSKGFLDNRGLRIDLILATKKLHE 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 L A ID + RG KPSDH P+ Sbjct: 241 SLTDAGIDYELRGIEKPSDHAPIWAEFK 268 >gi|323497693|ref|ZP_08102709.1| exonuclease III [Vibrio sinaloensis DSM 21326] gi|323317276|gb|EGA70271.1| exonuclease III [Vibrio sinaloensis DSM 21326] Length = 268 Score = 199 bits (505), Expect = 4e-49, Method: Composition-based stats. Identities = 79/268 (29%), Positives = 133/268 (49%), Gaps = 9/268 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V ++N+N +RAR+H L A I ++ PD+I LQE K D+ FP E ++++ Y + GQK Sbjct: 1 MKVISFNINGLRARLHQLQAVIDKHQPDVIGLQEIKVHDEAFPIEDVEAMGYKVYFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121 ++ GVA+L K +PI + P ++ + + N + + I N Y P G+ I+ Sbjct: 61 AHYGVAMLCKKEPISVQKGFPTDNEDHQKRMIMVTVEDDNGEKVTILNGYFPQGDNISHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175 TKY K + K + + + +E L+ GD NI P + F Sbjct: 121 TKYPYKRQFYKDLMTYLNDHHSNDEQLVVMGDINISPLDADIGIGEPNRKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R+ + L + GF D R H + +S++DY + + N+G+RID ++ + + Sbjct: 181 QPEEREWLKTLLDWGFVDTFRQIHPDANDRFSWFDYRSKGFPDNRGLRIDVVLATAKLAE 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + ID + RG KPSDH P+ + Sbjct: 241 KCIESDIDYELRGIEKPSDHAPIWSTFK 268 >gi|190150302|ref|YP_001968827.1| exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|189915433|gb|ACE61685.1| exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 7 str. AP76] Length = 275 Score = 199 bits (505), Expect = 5e-49, Method: Composition-based stats. Identities = 80/267 (29%), Positives = 128/267 (47%), Gaps = 8/267 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A I+++ PD++ LQE K D++FP++ + L YH+ GQK Sbjct: 9 MKFISFNINGLRARPHQLEAIIEKHQPDVLGLQEIKVADEDFPWDLVNHLGYHVFHHGQK 68 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122 + GVA+L+K +P+ + P D+ D Q R I A L + N Y P G + T Sbjct: 69 GHYGVALLTKKEPLAVRKGFPTDNADAQKRMIMADIETEFGVLTVLNGYFPQGENRSHET 128 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + + L E P++ GD NI P + + F Sbjct: 129 KFPAKEKFYADLQHYLESELSPENPIVIMGDMNISPTDLDIGIGEPNRKRWLRDGKCSFL 188 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +L + G D RA + + +S++DY + + N+G+RID ++ S Sbjct: 189 PEEREWLDRLYSYGLIDTFRAMNPQANDKFSWFDYRSKGFDDNRGLRIDLVLASKGLAER 248 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262 ID + R KPSDH+PV Sbjct: 249 CVETGIDLEIRAMEKPSDHSPVWAVFK 275 >gi|1944175|dbj|BAA19649.1| exonuclease III [Aggregatibacter actinomycetemcomitans] Length = 267 Score = 199 bits (505), Expect = 5e-49, Method: Composition-based stats. Identities = 79/267 (29%), Positives = 122/267 (45%), Gaps = 8/267 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +RAR H L I + PD++ LQE K D+ FP++ + L YH+ GQK Sbjct: 1 MKIMSFNINGLRARPHQLEEIINKYQPDVLGLQEIKVSDEVFPYDLVDHLGYHVNHFGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122 + GVA+LSK P+ + P DD + Q R I L + N Y P G Sbjct: 61 GHYGVALLSKQVPLSVRKGFPTDDEEAQKRIIMIDLETKFGQLTVINGYFPQGESREHPT 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + R+ Q + P+I GD NI P + + F Sbjct: 121 KFPAKQKFYADLQRYLEQDHNAQNPVIIMGDMNISPSDLDIGIGEENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +Q+L G D R + T + +S++DY + + N+G+RIDHI+ + + Sbjct: 181 PEEREWYQRLYAYGLEDTFRHMNPTVNDKFSWFDYRSKGFDDNRGLRIDHILANKALVAH 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262 I R KPSDH P+ Sbjct: 241 CVDTGIALDIRAMNKPSDHAPIWAEFK 267 >gi|260495692|ref|ZP_05815815.1| exodeoxyribonuclease III [Fusobacterium sp. 3_1_33] gi|260196757|gb|EEW94281.1| exodeoxyribonuclease III [Fusobacterium sp. 3_1_33] Length = 253 Score = 199 bits (505), Expect = 5e-49, Method: Composition-based stats. Identities = 74/263 (28%), Positives = 114/263 (43%), Gaps = 13/263 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN IRA I + E N DI CLQETK E L+ + + + Sbjct: 1 MKLISWNVNGIRAAIKKGFLDYFNEQNADIFCLQETKLSAGQLDLE-LKGYHQYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +P+ + L ++ D + R I F + Sbjct: 60 KGYSGTAIFTKQEPLSVSYGLGIEEHDKEGRVITLEFEKFYMVTVYTPNSKDELLRLDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + R + LE ++P++ GD N+ + D NP +A FT E R Sbjct: 120 M------VWEDEFRKYLKNLEKKKPVVACGDLNVAHKEIDLKNPKTNRRNAGFTDEERGK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L + GF D R + +YS+W Y + N G RID+ ++S L A I Sbjct: 174 FTELLDSGFIDTFRYFYPNLEQVYSWWSYRGRARENNAGWRIDYFVVSKGLEKNLVDAEI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLDIP 264 T+ G SDH PV++ L++ Sbjct: 234 HTQIEG----SDHCPVVLFLNLD 252 >gi|254523139|ref|ZP_05135194.1| exodeoxyribonuclease III [Stenotrophomonas sp. SKA14] gi|219720730|gb|EED39255.1| exodeoxyribonuclease III [Stenotrophomonas sp. SKA14] Length = 260 Score = 199 bits (505), Expect = 5e-49, Method: Composition-based stats. Identities = 88/260 (33%), Positives = 138/260 (53%), Gaps = 6/260 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A+WNVNS+ R+ +L W+K PDI+ +QETK ED FP L + Y GQK Sbjct: 1 MKIASWNVNSLNVRLPHLEQWLKAFGPDIVGIQETKLEDHKFPDSALIAAGYRSVFAGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVA+LS+ ++ +PG + + + LR+ NLY+ +G I + K Sbjct: 61 TYNGVALLSREPAQDVQIGIPGFEDEQKRVI-----AGTFGDLRVINLYVVNGQDIGTDK 115 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI-IWENDACFTLEVRQS 182 YD K+ W++ + ++ L+ LI GD+NI P D ++P EN + R + Sbjct: 116 YDYKLRWLEAVHAWIAEELQRHPKLIVMGDFNIAPDARDVHDPEVWNENHILTSTAERGA 175 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 KL +G D R +D +S+WDY A + +N G+RID ++S ++ ID Sbjct: 176 LNKLLQLGLHDGFRLHNDEAGTFSWWDYRAAGFRRNLGLRIDLTLVSDALKGSAVASGID 235 Query: 243 TKPRGWTKPSDHTPVIVSLD 262 +PR W +PSDH P V ++ Sbjct: 236 REPRTWERPSDHAPAWVEVE 255 >gi|152979045|ref|YP_001344674.1| exodeoxyribonuclease III [Actinobacillus succinogenes 130Z] gi|150840768|gb|ABR74739.1| exodeoxyribonuclease III [Actinobacillus succinogenes 130Z] Length = 266 Score = 199 bits (505), Expect = 5e-49, Method: Composition-based stats. Identities = 79/265 (29%), Positives = 123/265 (46%), Gaps = 7/265 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V ++N+N +RAR H L I + PDI+ LQE K D+ FP+E + L YH+ GQK Sbjct: 1 MKVISFNINGLRARPHQLEQIIDIHRPDILGLQEIKVADEQFPYEIVADLGYHVFHYGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 + GVA+L+K +P + P D + Q R I A F + +L + N Y P G Sbjct: 61 GHYGVALLTKQEPKAVRRGFPTDSEEAQRRIIMADFDTDFGSLTVINGYFPQGESRAHET 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFTL 177 + LR + ++ GD NI P + + F Sbjct: 121 KFPAKAKFYADLRRYVAEDLPCDNVVIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLP 180 Query: 178 EVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 E R+ +Q L ++G D R + T +S++DY + +++N+G+RIDHI+ + + Sbjct: 181 EEREWYQHLYDLGLEDTFRKLNPTASDKFSWFDYRSKGFNENRGLRIDHILANTKLAEHC 240 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSL 261 ID R KPSDH P+ Sbjct: 241 TETGIDLTIRAMEKPSDHAPIWAVF 265 >gi|59712190|ref|YP_204966.1| exonuclease III [Vibrio fischeri ES114] gi|59480291|gb|AAW86078.1| exonuclease III [Vibrio fischeri ES114] Length = 268 Score = 199 bits (505), Expect = 5e-49, Method: Composition-based stats. Identities = 80/268 (29%), Positives = 128/268 (47%), Gaps = 9/268 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V ++N+N +RAR+H L A I ++NPD+I LQE K ++ FP E ++++ Y + GQK Sbjct: 1 MKVISFNINGLRARLHQLQAIIDKHNPDVIGLQEIKVHNEMFPVEAVEAMGYKVYFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121 ++ GVA+L K +PI + + + + + + I N Y P G+ I Sbjct: 61 AHYGVAMLCKQEPISVQYGFDTDTEEHQKRMIMTTHQREDGSKVTIMNGYFPQGDNIKHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175 TK+ K + K + +E +I GD NI P + F Sbjct: 121 TKFPYKRQFYKDLMTHLHTHHTNDEEIIVMGDINISPIDADIGIGEPNAKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R+ Q L++ GF D R H +S++DY + + N+G+RID IM +P Sbjct: 181 QPEEREWLQTLKDWGFEDTFRNLHPEVTDQFSWFDYRSKGFVDNRGLRIDVIMATPTLAV 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + ID + RG KPSDH P+ + Sbjct: 241 KCTESGIDYELRGIEKPSDHAPIWSTFK 268 >gi|113867383|ref|YP_725872.1| exonuclease III [Ralstonia eutropha H16] gi|113526159|emb|CAJ92504.1| Exonuclease III [Ralstonia eutropha H16] Length = 276 Score = 199 bits (505), Expect = 5e-49, Method: Composition-based stats. Identities = 84/263 (31%), Positives = 133/263 (50%), Gaps = 6/263 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENN-----PDIICLQETKTEDKNFPFETLQSLNYHIE 58 + +A+WNVNS++ R+ + W+ E + D +CLQE K D +P L++ +H Sbjct: 12 LRIASWNVNSLKVRLPQVLQWLAEQDQTGAPIDALCLQELKLPDDKYPLAELENAGFHSI 71 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 GQK+YNGVAIL++ + + + + LR+ Y P+G Sbjct: 72 YTGQKTYNGVAILARDASMPGPADVVRNIPGFEDAQQRVIAATYGD-LRLVCAYFPNGQA 130 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 S K+ K+ W+ + + ++ L GD+NI P+ D ++P WE + + Sbjct: 131 PDSDKFVYKLKWLDAMTAWLREEMKRYPKLALLGDFNIAPEDRDVHDPKKWEGQNLVSPQ 190 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R +F L +G DA R +S+WDY ++ +N G+RIDHI+LSP TS + Sbjct: 191 ERAAFAALVELGLADAFRQFEQPEKAFSWWDYRMMAFRRNAGLRIDHILLSPALTSGCSA 250 Query: 239 ARIDTKPRGWTKPSDHTPVIVSL 261 ID PR W +PSDHTPV+ +L Sbjct: 251 CVIDRVPRTWEQPSDHTPVVATL 273 >gi|256028521|ref|ZP_05442355.1| exodeoxyribonuclease III [Fusobacterium sp. D11] gi|289766441|ref|ZP_06525819.1| exodeoxyribonuclease III [Fusobacterium sp. D11] gi|289717996|gb|EFD82008.1| exodeoxyribonuclease III [Fusobacterium sp. D11] Length = 253 Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats. Identities = 74/263 (28%), Positives = 114/263 (43%), Gaps = 13/263 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN IRA I + E N DI CLQETK E L+ + + + Sbjct: 1 MKLISWNVNGIRAAIKKGFLDYFNEQNADIFCLQETKLSAGQLDLE-LKGYHQYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +P+ + L ++ D + R I F + Sbjct: 60 KGYSGTAIFTKQEPLSVSYGLGIEEHDKEGRVITLEFEKFYMVTVYTPNSKDELLRLDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + R + LE ++P++ GD N+ + D NP +A FT E R Sbjct: 120 M------IWEDEFRKYLKNLEKKKPVVVCGDLNVAHKEIDLKNPKTNRRNAGFTDEERGK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L + GF D R + +YS+W Y + N G RID+ ++S L A I Sbjct: 174 FTELLDSGFIDTFRYFYPNLEQVYSWWSYRGRARENNAGWRIDYFVVSKGLEKNLVDAEI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLDIP 264 T+ G SDH PV++ L++ Sbjct: 234 HTQIEG----SDHCPVVLFLNLD 252 >gi|304413776|ref|ZP_07395220.1| exonuclease III [Candidatus Regiella insecticola LSR1] gi|304283867|gb|EFL92261.1| exonuclease III [Candidatus Regiella insecticola LSR1] Length = 271 Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats. Identities = 86/266 (32%), Positives = 122/266 (45%), Gaps = 8/266 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RA H LAA I ++ PDII LQETK D FP + YHI GQK Sbjct: 1 MKFVSFNINGLRAHFHQLAAIITQHQPDIIGLQETKVHDDMFPLAEISQYGYHIYYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122 + GVA+L K QP+ + P DD D Q R I L + N Y P G Sbjct: 61 GHYGVALLIKQQPLAVRRGFPTDDADAQRRIIMVDVATPQGNLTVINGYFPQGENRNHPT 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE------NDACFT 176 K+ K + + Q ++ L+ GD NI P D + F Sbjct: 121 KFPAKAKFYSDLQHYLEQHFTPDDQLLIMGDLNICPTELDIGIGSDNQKRWLRSGKCAFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R +LQN G D R+ + + +S++DY + + +N+G+RID ++ S S Sbjct: 181 PEERDWLARLQNWGLIDTFRSKNPECNDQFSWFDYRSRGFDENRGLRIDLLLASAPLASR 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 + ID + RG KPSDH PV Sbjct: 241 CIATGIDYQIRGMEKPSDHAPVWSEF 266 >gi|315634109|ref|ZP_07889398.1| exodeoxyribonuclease III [Aggregatibacter segnis ATCC 33393] gi|315477359|gb|EFU68102.1| exodeoxyribonuclease III [Aggregatibacter segnis ATCC 33393] Length = 267 Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats. Identities = 82/267 (30%), Positives = 124/267 (46%), Gaps = 8/267 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V ++N+N +RAR H L I + PDI+ LQE K D+ FP+E + L YH+ GQK Sbjct: 1 MKVMSFNINGLRARPHQLEEIIDKYQPDILGLQEIKVADEVFPYELVDHLGYHVNHFGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122 + GVA+LSK P+ + P DD + Q R I L + N Y P G Sbjct: 61 GHYGVALLSKQAPLLVRKGFPTDDEEAQKRIIMIDLDTPFGQLTVINGYFPQGESREHPT 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + R+ Q + P+I GD NI P + + F Sbjct: 121 KFPAKQKFYADLQRYLEQDHNAQNPVIIMGDMNISPSDLDIGIGEENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +Q+L G D R + T + +S++DY + ++ N+G+RIDHI+ + + Sbjct: 181 PEEREWYQRLYAYGLEDTFRYLNPTVNDKFSWFDYRSKGFNDNRGLRIDHILANKALAAH 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262 + I R KPSDH P+ Sbjct: 241 CVDSGIALDIRAMDKPSDHAPIWAEFK 267 >gi|167033891|ref|YP_001669122.1| exonuclease III [Pseudomonas putida GB-1] gi|166860379|gb|ABY98786.1| exodeoxyribonuclease III [Pseudomonas putida GB-1] Length = 270 Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats. Identities = 85/269 (31%), Positives = 132/269 (49%), Gaps = 11/269 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + +N+N +RAR H LAA I+++ PD+I LQETK D FP +Q+L YH+ GQK Sbjct: 1 MKIVCFNINGLRARPHQLAALIEKHQPDVIGLQETKVSDDQFPLADVQALGYHVHYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122 + GVA+LS+ P+ + D+ D Q RFI TF + + I N Y P G Sbjct: 61 GHYGVALLSRQAPLSLHKGFATDEDDAQRRFIWGTFPDADGNPITIMNGYFPQGESRDHP 120 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175 K+ K + + ++PL+ GD NI PQ D + F Sbjct: 121 TKFPAKQRFYSDLQALLEGQFRNDQPLLVMGDMNISPQDCDIGIGADNAKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKN--KGIRIDHIMLSPEA 232 E R+ ++L+ G D+ R + +S++DY + + + +G+RID IM S Sbjct: 181 LPEEREWMERLKGWGLVDSFRHLYPEVTDRFSWFDYRSRGFEDDPKRGLRIDLIMASQHL 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + +A +D + R KPSDH P+ + L Sbjct: 241 VPRIKAAGVDYELRAMEKPSDHAPIWLEL 269 >gi|260772508|ref|ZP_05881424.1| exodeoxyribonuclease III [Vibrio metschnikovii CIP 69.14] gi|260611647|gb|EEX36850.1| exodeoxyribonuclease III [Vibrio metschnikovii CIP 69.14] Length = 270 Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats. Identities = 86/268 (32%), Positives = 134/268 (50%), Gaps = 9/268 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +RAR+H L A I ++ PDII LQE K D+ FP + ++++ YH+ GQK Sbjct: 1 MKIVSFNINGLRARLHQLQALIDKHQPDIIGLQEIKVHDEAFPVQAVEAMGYHVYFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITS- 121 ++ GVA+L K P+E+ P D+ D Q R I TF N + + N Y P G+ I Sbjct: 61 AHYGVALLCKKAPLEVQKGFPTDNDDHQKRMIIGTFLDENGDKVTVLNGYFPQGDNIHHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175 TK+ K + + + + + +E +I GD NI P D + F Sbjct: 121 TKFPYKRQFYQDLMNYLTDYHTPDEAIIVMGDINISPIDLDIGIGEVNRQRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E RQ Q+L + G D R H + +S++DY + + N+G+RID I+ +P Sbjct: 181 QPEERQWLQRLLDWGLEDTFRKLHPSVEDKFSWFDYRSRGFDDNRGLRIDTILATPSLAI 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + ID R KPSDH P+ Sbjct: 241 DCVESDIDYPLRAIEKPSDHAPIWAVFK 268 >gi|90412875|ref|ZP_01220875.1| putative exodeoxyribonuclease III [Photobacterium profundum 3TCK] gi|90326234|gb|EAS42661.1| putative exodeoxyribonuclease III [Photobacterium profundum 3TCK] Length = 268 Score = 198 bits (504), Expect = 6e-49, Method: Composition-based stats. Identities = 80/268 (29%), Positives = 133/268 (49%), Gaps = 9/268 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V ++N+N +RAR+H L A I+++ PD+I LQE K D+ FP ++++ Y + GQK Sbjct: 1 MKVISFNINGLRARLHQLQALIEKHQPDVIGLQEIKVHDEVFPLADVEAMGYKVYHHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLD-VQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121 ++ GVA+L K +PI + P DD D + + + + + + N Y P G ++ Sbjct: 61 AHYGVAMLCKQEPINVQKGFPTDDEDAQRRMIMATFEQEDGKKVTVLNGYFPQGENLSHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175 TK+ K + + + + EE +I GD NI P + F Sbjct: 121 TKFPAKEKFYADLMNYLNTHHTNEEEVIVMGDINISPIDLDIGIGPANAKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 L R+ + L + GFTD R H +S++DY + + N+G+RID ++ +P + Sbjct: 181 QLIEREWLKTLMDWGFTDTFRQLHPDVDDQFSWFDYRSKGFVDNRGLRIDVVLATPSLAA 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 A ID + RG KPSDH P+ + Sbjct: 241 RCIDAGIDYELRGIEKPSDHAPIWSTFK 268 >gi|292899632|ref|YP_003539001.1| exodeoxyribonuclease III [Erwinia amylovora ATCC 49946] gi|291199480|emb|CBJ46597.1| exodeoxyribonuclease III [Erwinia amylovora ATCC 49946] Length = 268 Score = 198 bits (504), Expect = 6e-49, Method: Composition-based stats. Identities = 82/266 (30%), Positives = 123/266 (46%), Gaps = 8/266 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A ++++ PD+I LQETK D FP + SL YH+ GQK Sbjct: 1 MKFVSFNINGLRARPHQLQAIVEQHQPDVIGLQETKVHDDMFPLAEVASLGYHVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122 + GVA+L K QP+ + DD D Q R I A + L + N Y P G Sbjct: 61 GHYGVALLCKQQPVAVRRGFASDDEDAQRRIIMADIMTPSGLLTVINGYFPQGESRDHPT 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + + + Q+ + + L+ GD NI + + F Sbjct: 121 KFPAKEKFYRDLHSYLEQQQKPDNQLLIMGDMNISSGDLDIGIGEENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ KL N G D RA H + +S++DY + + N+G+RID ++ S Sbjct: 181 PEEREWMDKLMNWGLVDTWRAQHATINDRFSWFDYRSKGFDDNRGLRIDLVLASRPLADR 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 + ID R KPSDH P+ Sbjct: 241 CVATGIDYDIRAMEKPSDHAPIWAEF 266 >gi|150007753|ref|YP_001302496.1| exodeoxyribonuclease [Parabacteroides distasonis ATCC 8503] gi|256840019|ref|ZP_05545528.1| exodeoxyribonuclease III [Parabacteroides sp. D13] gi|149936177|gb|ABR42874.1| exodeoxyribonuclease [Parabacteroides distasonis ATCC 8503] gi|256738949|gb|EEU52274.1| exodeoxyribonuclease III [Parabacteroides sp. D13] Length = 284 Score = 198 bits (504), Expect = 6e-49, Method: Composition-based stats. Identities = 82/265 (30%), Positives = 138/265 (52%), Gaps = 12/265 (4%) Query: 1 MSVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HI 57 + + + T+N N +RA + L W+ + PD++C+QETK + FP ET ++L Y ++ Sbjct: 29 LEKLKIITYNTNGLRAAVGKGLPEWLAQEQPDVLCIQETKLQPDQFPSETFETLGYKSYL 88 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 + +K Y+GVAIL+K +P I + + D + RF+ A F + I ++Y P G Sbjct: 89 FSAQKKGYSGVAILTKQEPDHIEYGMGIEKYDNEGRFLRADFG----DVSIVSVYHPSG- 143 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + D K+ W++ F ++ + + LI GDYNI +P D ++PI ++ F Sbjct: 144 TSGDERQDFKMIWLEDFQKYVVELQKSRPNLILCGDYNICHEPIDIHDPIRNAKNSGFLP 203 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 E R+ + + GFTD R + Y++W Y +S SKNKG RID+ M+S + Sbjct: 204 EEREWMTRFLSAGFTDTFRFLNPDKQEYTWWSYRFNSRSKNKGWRIDYCMVSDNMKPKVK 263 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLD 262 +A I SDH P ++ ++ Sbjct: 264 AAYILNDA----VHSDHCPAVLEIE 284 >gi|296387271|ref|ZP_06876770.1| putative exonuclease III [Pseudomonas aeruginosa PAb1] Length = 266 Score = 198 bits (504), Expect = 6e-49, Method: Composition-based stats. Identities = 104/270 (38%), Positives = 156/270 (57%), Gaps = 5/270 (1%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 M + +AT+NVN I+ R+ L AW++ PDI+CLQE KT D FP L+ Y Sbjct: 1 MDTLKIATFNVNGIQTRLAALLAWLEREAPDIVCLQELKTPDARFPAAALERAGYGAIWQ 60 Query: 61 GQKSYNGVAILSKY-QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 GQ ++NGVAIL++ QP+E+ LPG+ D +R++EA L + +LYLP+GNP Sbjct: 61 GQSAWNGVAILARDSQPLEVRRGLPGNASDPHSRYLEAAVDG----LLVASLYLPNGNPQ 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K+D K++W + +R A++ +E P++ AGD+N++P D Y+ W+ DA E Sbjct: 117 PGPKFDYKLAWFEHLIRHAAELMESGHPVVLAGDFNVVPSDFDIYDTRSWKKDALLQPES 176 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R+ F++L G+ DA+R LY+FWDY+ W ++ G+RIDH++LS L A Sbjct: 177 RECFERLLRQGWVDALRQRFPDRRLYTFWDYFRQHWQRDAGLRIDHLLLSASLADHLEDA 236 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKK 269 +D RG SDH P VSL P ++ Sbjct: 237 GVDRWVRGEEHASDHAPAWVSLRRPSEPRR 266 >gi|308209127|gb|ADO20908.1| exodeoxyribonuclease-2 [Saccharopolyspora spinosa] Length = 266 Score = 198 bits (504), Expect = 6e-49, Method: Composition-based stats. Identities = 69/266 (25%), Positives = 121/266 (45%), Gaps = 5/266 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A+WNVNS+ AR+ L W+ PD++C+QE K FPF+ + L Y + G Sbjct: 1 MRIASWNVNSVGARLPKLLDWLGTAEPDVLCVQELKCAADAFPFDEVGELGYKVAAHGTG 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-----TQTLRIGNLYLPHGNP 118 +NGVA+LS+ E+ L + + T +R+ ++Y+P+G Sbjct: 61 RWNGVAVLSRVGIDEVRHGLLDEPGFQVDGAMFETQEPRAIGATCGGVRVWSVYVPNGRE 120 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + Y K+ W+ + + + P GD+NI P D ++ + + Sbjct: 121 VGHPHYAYKLRWLDALRATVIEEMAADRPFAVLGDFNICPTDADVWDIAGFADSTHVRKN 180 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 ++ L G R +++WDY A + N+G+RID + + + T + Sbjct: 181 EGKALAALAKPGLARVYRRAMKYDIPFTYWDYRALRFPNNQGMRIDLVYGNEKFTGAVTD 240 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIP 264 + +D + R SDH PV+V LD+P Sbjct: 241 SYVDREARKGKGTSDHAPVVVDLDVP 266 >gi|53713851|ref|YP_099843.1| exodeoxyribonuclease [Bacteroides fragilis YCH46] gi|60682064|ref|YP_212208.1| exodeoxyribonuclease [Bacteroides fragilis NCTC 9343] gi|253565813|ref|ZP_04843268.1| exodeoxyribonuclease [Bacteroides sp. 3_2_5] gi|265764197|ref|ZP_06092765.1| exodeoxyribonuclease III [Bacteroides sp. 2_1_16] gi|52216716|dbj|BAD49309.1| exodeoxyribonuclease [Bacteroides fragilis YCH46] gi|60493498|emb|CAH08285.1| exodeoxyribonuclease [Bacteroides fragilis NCTC 9343] gi|251946092|gb|EES86499.1| exodeoxyribonuclease [Bacteroides sp. 3_2_5] gi|263256805|gb|EEZ28151.1| exodeoxyribonuclease III [Bacteroides sp. 2_1_16] Length = 253 Score = 198 bits (504), Expect = 6e-49, Method: Composition-based stats. Identities = 84/261 (32%), Positives = 140/261 (53%), Gaps = 12/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60 + + T+NVN +RA + L W+ E NPD++CLQETK + + +P E ++L Y ++ + Sbjct: 1 MKIITYNVNGLRAAVNKGLPEWLAEENPDVLCLQETKLQPEQYPAEAFEALGYKAYLYSA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GVAIL+K +P I + ++ D + RFI A F L + ++Y P G Sbjct: 61 QKKGYSGVAILTKVEPDHIEYGMGIEEYDNEGRFIRADFG----DLSVVSVYHPSG-TSG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K+ W++ F ++ ++ + LI GDYNI +P D ++P+ ++ F E R Sbjct: 116 DERQAFKMVWLEAFQKYVTELRKSRPNLILCGDYNICHEPIDIHDPVRNATNSGFLPEER 175 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + + + GF D+ R + Y++W Y +S +KNKG RID+ M+S SLL A Sbjct: 176 EWMTRFLSAGFIDSFRTLYPQKQEYTWWSYRFNSRAKNKGWRIDYCMVSEPVRSLLKEAV 235 Query: 241 IDTKPRGWTKPSDHTPVIVSL 261 I SDH P+ + + Sbjct: 236 ILNNA----VHSDHCPMALEI 252 >gi|117620950|ref|YP_857462.1| exodeoxyribonuclease III [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117562357|gb|ABK39305.1| exodeoxyribonuclease III [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 268 Score = 198 bits (504), Expect = 6e-49, Method: Composition-based stats. Identities = 79/265 (29%), Positives = 133/265 (50%), Gaps = 9/265 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +RAR+H L A I ++ PD+I LQE K D+ FP ++++ YH+E GQK Sbjct: 1 MKIISFNINGLRARLHQLKAIIDKHQPDVIGLQEIKVHDEAFPLADVEAMGYHVEFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLD-VQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121 ++ GVAI+SK +P+++ P DD + + + + +++ N Y P G Sbjct: 61 AHYGVAIMSKQKPVKVEKGFPTDDEEAQRRMIMATFEREDGSLIKVMNGYFPQGESQDHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175 TK+ K + + R+ + L+ GD NI P + + F Sbjct: 121 TKFPAKQKFYEDLQRYLETHHTPSDQLVLIGDMNISPTDLDIGIGEANRKRWLRDGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 R+ ++L+ G TD RA + T +S++DY + + +N+G+RID IM S Sbjct: 181 LPIEREWMERLKGFGLTDTFRAANPTECERFSWFDYRSRGFDENRGLRIDLIMASDALKD 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIV 259 + ID + RG KPSDH P+ Sbjct: 241 TVTETGIDYELRGIDKPSDHAPIWA 265 >gi|225620509|ref|YP_002721766.1| exodeoxyribonuclease [Brachyspira hyodysenteriae WA1] gi|225215328|gb|ACN84062.1| exodeoxyribonuclease [Brachyspira hyodysenteriae WA1] Length = 261 Score = 198 bits (504), Expect = 6e-49, Method: Composition-based stats. Identities = 71/265 (26%), Positives = 107/265 (40%), Gaps = 9/265 (3%) Query: 1 MSVVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 MS++ + +WNVN IRA L +IK+ NPDIICLQETK ++ P + Y + Sbjct: 1 MSILKIISWNVNGIRAAYKKGLVDFIKKENPDIICLQETKAFEEQLPEDLRNIEGYELFI 60 Query: 60 CGQKS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 G + ++ Y ++ + + ++ I N+Y P+G Sbjct: 61 NPADPEVKKGYSGVAIYTKLKPNKEIKNKLGSKFSDREGRILSLEFDDFTIFNVYFPNGG 120 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + +L+ +I GD NI + D P E F Sbjct: 121 KSEEHFQ--YKLSFYDEITKHLSKLKKNTNVILCGDMNIAHEAIDLARPKENEKSIGFLP 178 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 E R+ + N GFTD R YS+WD S KN G RID+ ++ E + Sbjct: 179 EEREKITEFLNKGFTDTFRMFVKEGGHYSWWDMKTRSREKNVGWRIDYFFVNNEMAPNIK 238 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLD 262 A I T G SDH P+++ D Sbjct: 239 RADILTDVMG----SDHCPILIEWD 259 >gi|294625005|ref|ZP_06703655.1| exodeoxyribonuclease III [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292600680|gb|EFF44767.1| exodeoxyribonuclease III [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 330 Score = 198 bits (504), Expect = 6e-49, Method: Composition-based stats. Identities = 87/275 (31%), Positives = 146/275 (53%), Gaps = 3/275 (1%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64 +AT+NVN I +R+ +L W++ PDI+ LQE K+ FP + ++ Y + G+KS Sbjct: 7 KIATFNVNGIASRLPHLLEWLQREQPDIVGLQELKSTQSAFPEQAIRDAGYGVIWHGEKS 66 Query: 65 YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124 +NGVA+L++ + D + + LYLP+GNP K+ Sbjct: 67 WNGVALLARGTEPVEIRRGLPWDPRDTQS---RYLEAAIHGVVVACLYLPNGNPQPGPKF 123 Query: 125 DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ 184 D K++W +R +R A ++L P+ GD+N++P D Y+P W DA E R+++Q Sbjct: 124 DYKLAWFERLIRHAKTLVDLPHPVALIGDFNVVPTDADIYDPKGWRKDALLQPESREAYQ 183 Query: 185 KLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK 244 L G+TD++ A H +Y+FWDY+ +++++G+RIDH++L+ L A +D Sbjct: 184 TLLAQGWTDSLPAIHGQTPIYTFWDYFRQHFARDRGLRIDHLLLNRTLGPGLQDAGVDKW 243 Query: 245 PRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMK 279 R K SDH P +S+ +P+ + T+ K Sbjct: 244 VRALEKASDHAPTWISVRVPDAPAEAAPDTTPVAK 278 >gi|91789279|ref|YP_550231.1| exodeoxyribonuclease III [Polaromonas sp. JS666] gi|91698504|gb|ABE45333.1| Exodeoxyribonuclease III [Polaromonas sp. JS666] Length = 272 Score = 198 bits (504), Expect = 6e-49, Method: Composition-based stats. Identities = 106/259 (40%), Positives = 154/259 (59%), Gaps = 5/259 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+NVN I+ R+ NL +W+ + +PD++CLQE K D FP L+ Y GQ+ Sbjct: 1 MKLATFNVNGIKTRLPNLLSWLAKESPDLVCLQELKALDGVFPQAELREAGYGAVWKGQR 60 Query: 64 SYNGVAILSKY-QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 S+NGVAIL+K P+EI LPGD D Q+R++EAT + + LYLP+GNP Sbjct: 61 SWNGVAILAKDSDPVEIRRELPGDPGDDQSRYLEATVNG----IIVACLYLPNGNPQPGP 116 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K+D K++W +R R A + +P+ AGD+N++P D YNP W DA E R++ Sbjct: 117 KFDYKLAWFERLNRHAQALYQSGQPVALAGDFNVVPTDFDIYNPKSWLKDALLQPESREA 176 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 + +L + G+ D++R H +Y+FWDY+ W KN G+RIDHI+L+ E L +A +D Sbjct: 177 YARLLSQGWVDSLRHLHPDERIYTFWDYFRQHWQKNSGLRIDHILLNAELAPGLKAAGVD 236 Query: 243 TKPRGWTKPSDHTPVIVSL 261 T R SDH P V L Sbjct: 237 TWVRDEEHASDHAPTWVEL 255 >gi|319405904|emb|CBI79536.1| exodeoxyribonuclease III [Bartonella sp. AR 15-3] Length = 260 Score = 198 bits (504), Expect = 6e-49, Method: Composition-based stats. Identities = 136/259 (52%), Positives = 176/259 (67%), Gaps = 1/259 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + TWN+ I+AR L W+K+N PD++CLQE K D+NFP T++ L YH+ET GQK Sbjct: 1 MKIVTWNIAGIKARHETLCKWLKQNQPDVVCLQEIKCIDENFPRNTIEDLGYHVETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 S+NGVAILSK P EI+ LPGD D QAR+IEA ++ N ++R+ +LYLP+GNPI S K Sbjct: 61 SFNGVAILSKKIPDEIICRLPGDHNDKQARYIEAVYSTNKGSIRVASLYLPNGNPINSEK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K W+KR A LE EEPLI AGDYN+IP D NP W NDA F ++R+ F Sbjct: 121 YFYKTEWMKRLYTHAKSLLEYEEPLILAGDYNVIPTSLDAKNPQEWNNDALFLPQIREIF 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q + ++GF DAIR DT +SFWD+ A++W KN GIRIDH++LSPEA L A T Sbjct: 181 QCITHLGFYDAIRNVTDTP-SFSFWDFQANAWKKNNGIRIDHLLLSPEAADQLICAYSQT 239 Query: 244 KPRGWTKPSDHTPVIVSLD 262 + RG+ KPSDH P+ V L+ Sbjct: 240 EVRGYQKPSDHIPIWVELN 258 >gi|262203673|ref|YP_003274881.1| exodeoxyribonuclease III Xth [Gordonia bronchialis DSM 43247] gi|262087020|gb|ACY22988.1| exodeoxyribonuclease III Xth [Gordonia bronchialis DSM 43247] Length = 293 Score = 198 bits (504), Expect = 6e-49, Method: Composition-based stats. Identities = 94/291 (32%), Positives = 136/291 (46%), Gaps = 18/291 (6%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPF---ETLQSLNYHIETC 60 + VATWNVNS++ RI L W+ E PD++CLQETK D+ F L Y I Sbjct: 1 MRVATWNVNSVKQRIPRLLPWLDERRPDVVCLQETKLSDEAFHDVLGADLAERGYAIAHH 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT-LRIGNLYLPHGNPI 119 GQ +NGVA+LSK ++ T +EA LRI +LY+P+G Sbjct: 61 GQGQWNGVALLSKVGLDDVTTGFDDMPGYPDPATLEARAVSAVCGGLRIYSLYVPNGRVP 120 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 S Y K++W+ ++ + + GD NI P D ++P + T Sbjct: 121 DSDHYRYKLTWLAA----LAKSISEPSSTLLCGDMNIAPADADVFDPDAYVGHTHVTEPE 176 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R + +G D +R ++S+WDY A + K+ G+RID I+ AT + +A Sbjct: 177 RAALSAFAELGLHDVVRDRWPDSRVFSYWDYRAGMFHKDLGMRIDLILAGESATDRVAAA 236 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD----------IPEPRKKQQDSTSQNMKP 280 +D K R TKPSDH PVIV LD +P P + +S+ P Sbjct: 237 WVDRKARKGTKPSDHAPVIVDLDEAPDGDIGPVVPPPSNPAKRGSSKVKLP 287 >gi|291286441|ref|YP_003503257.1| exodeoxyribonuclease III [Denitrovibrio acetiphilus DSM 12809] gi|290883601|gb|ADD67301.1| exodeoxyribonuclease III [Denitrovibrio acetiphilus DSM 12809] Length = 266 Score = 198 bits (504), Expect = 6e-49, Method: Composition-based stats. Identities = 83/267 (31%), Positives = 129/267 (48%), Gaps = 12/267 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V T+NVNSIR RIH L I++++PDII LQETK D+ FP E + L YH+E GQK Sbjct: 1 MKVVTFNVNSIRTRIHQLEKLIEKHSPDIIGLQETKVRDEEFPVEEISRLGYHVEFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 ++ GVA++SK +P+ + P DD + Q R I F I + + K Sbjct: 61 THYGVAVMSKEKPVLVQKGFPSDDSEAQRRLIMCDFGSVKF---INGYFPQGESRTHPVK 117 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY------NPIIWENDACFTL 177 + K + L + + +++ ++ GD N+ P +D + + F Sbjct: 118 FPAKAKFYSDLLAYLNTSFSVDDNVLLVGDMNVAPTDYDIGISPDSVKRWLKQGKTSFLP 177 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLY-SFWDYYADSWSKN--KGIRIDHIMLSPEATS 234 E R+ + + + G TD R + S++DY + + ++ G+RIDHIM + Sbjct: 178 EEREWIKNVADWGLTDVYRKIKPESDEFMSWFDYRSKGFERDPKSGLRIDHIMATEALAD 237 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261 ID + RG KPSDH PV Sbjct: 238 CCVDCGIDYEIRGMEKPSDHAPVWADF 264 >gi|254854529|ref|ZP_05243877.1| exodeoxyribonuclease [Listeria monocytogenes FSL R2-503] gi|258607929|gb|EEW20537.1| exodeoxyribonuclease [Listeria monocytogenes FSL R2-503] Length = 251 Score = 198 bits (503), Expect = 7e-49, Method: Composition-based stats. Identities = 64/262 (24%), Positives = 112/262 (42%), Gaps = 13/262 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + +E + DI CLQETK ++ + L + + + Sbjct: 1 MKLISWNVNGLRAAVKKGFLEYFEEVDADIFCLQETKLQEGQIELD-LPAYKDYWNYAVK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +P+ + + D + R I F + Sbjct: 60 KGYSGTAIFTKVEPLSVQYGFGVPEHDTEGRVITLEFEEFFMVTVYTPNSQAELKRLDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + + L+ +P++ GD N+ + D NP +A F+ E R Sbjct: 120 M------TFEDAILEYVKNLDKTKPVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F + GF D+ R + YS+W Y ++ ++N G RID+ ++S L A+I Sbjct: 174 FSAFLDAGFIDSFRYFYPDLTDAYSWWSYRMNARARNTGWRIDYFVVSERLKDKLVDAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 G SDH PV + L++ Sbjct: 234 HADVLG----SDHCPVELELNL 251 >gi|16803822|ref|NP_465307.1| hypothetical protein lmo1782 [Listeria monocytogenes EGD-e] gi|16411236|emb|CAC99860.1| lmo1782 [Listeria monocytogenes EGD-e] Length = 251 Score = 198 bits (503), Expect = 7e-49, Method: Composition-based stats. Identities = 65/262 (24%), Positives = 113/262 (43%), Gaps = 13/262 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + +E + DI CLQETK ++ + L + + + Sbjct: 1 MKLISWNVNGLRAAVKKGFLEYFEEVDADIFCLQETKLQEGQIELD-LPAYKDYWNYAVK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +P+ + L + D + R I F + Sbjct: 60 KGYSGTAIFTKVEPLSVQYGLGIPEHDTEGRVITLEFEEFFMVTVYTPNSQAELKRLDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + + L+ +P++ GD N+ + D NP +A F+ E R Sbjct: 120 M------TFEDAILEYVKNLDNTKPVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F + GF D+ R + YS+W Y ++ ++N G RID+ ++S L A+I Sbjct: 174 FSAFLDAGFIDSFRYFYPDLTDAYSWWSYRMNARARNTGWRIDYFVVSERLKDKLVDAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 G SDH PV + L++ Sbjct: 234 HADVLG----SDHCPVELELNL 251 >gi|88807632|ref|ZP_01123144.1| exodeoxyribonuclease III [Synechococcus sp. WH 7805] gi|88788846|gb|EAR20001.1| exodeoxyribonuclease III [Synechococcus sp. WH 7805] Length = 276 Score = 198 bits (503), Expect = 7e-49, Method: Composition-based stats. Identities = 84/265 (31%), Positives = 139/265 (52%), Gaps = 4/265 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A+WNVNS+R R+ ++ +W+ + D++ LQETK ++ FP E + Y + GQK Sbjct: 1 MQIASWNVNSVRTRLGHVLSWLDRHTIDVLALQETKVDNPLFPLEPFRERGYDVSIHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQAR----FIEATFTINTQTLRIGNLYLPHGNPI 119 SYNGVA++S+ ++ L G+ + + +R+ NLY+P+G+ + Sbjct: 61 SYNGVALISRQPLEDVRLGLTGELPGDADAEALGAQKRVISALVDGVRVVNLYVPNGSSL 120 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 S KY K++W+ R+ +EPL GD+NI P+ D ++P + Sbjct: 121 RSEKYSYKLNWLGCLERYLRSAEARDEPLCVVGDFNIGPEARDLHDPDRLTGGIMASEAE 180 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R++ ++ DA R +S+WDY + +W+++ G RIDHI LS + L S Sbjct: 181 REALHQVLGSNLGDAFRLFEPGSGHWSWWDYRSGAWNRDSGWRIDHIYLSRDLQELARSC 240 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIP 264 ID + RG +PSDH PV+V L Sbjct: 241 SIDKQERGREQPSDHAPVMVDLAWD 265 >gi|329114100|ref|ZP_08242864.1| Exodeoxyribonuclease III [Acetobacter pomorum DM001] gi|326696639|gb|EGE48316.1| Exodeoxyribonuclease III [Acetobacter pomorum DM001] Length = 261 Score = 198 bits (503), Expect = 7e-49, Method: Composition-based stats. Identities = 98/264 (37%), Positives = 136/264 (51%), Gaps = 5/264 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+R R+ + W+K PD++ +QE K E FP + Y GQK Sbjct: 1 MKLATWNVNSVRQRMDLVLDWLKREQPDVLMMQEIKCETDLFPKAAFEDAGYGCAVIGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 SYNGV+ L + HLPG + TQ + +GNLYLP+GN Sbjct: 61 SYNGVSTLVRGDFSITTDHLPGFSDPAARYV-----EVRTQHIVLGNLYLPNGNSGGEQG 115 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ ++ A L E + AGDYNI P P DC + DA + R ++ Sbjct: 116 YATKLEFLNALTARARLLLAEETDFVLAGDYNICPAPIDCAPGALGPEDALVRPQSRAAY 175 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 ++L +G TDA+RA H T Y+FWDY A +W ++ G+RIDH++LSP L +A D Sbjct: 176 RRLLWLGLTDALRAVHPTGAAYTFWDYQARAWERDCGLRIDHMLLSPRLAERLQTAEPDK 235 Query: 244 KPRGWTKPSDHTPVIVSLDIPEPR 267 R +PSDH P IV+L P Sbjct: 236 NERAMPRPSDHVPFIVTLKDPVKP 259 >gi|298481071|ref|ZP_06999265.1| exodeoxyribonuclease III [Bacteroides sp. D22] gi|298272645|gb|EFI14212.1| exodeoxyribonuclease III [Bacteroides sp. D22] Length = 254 Score = 198 bits (503), Expect = 7e-49, Method: Composition-based stats. Identities = 81/262 (30%), Positives = 137/262 (52%), Gaps = 12/262 (4%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59 ++ + T+NVN +RA + L W+ + NPDI+CLQETK + +P E ++L Y ++ + Sbjct: 1 MMKIITYNVNGLRAAVSKGLPEWLAQENPDILCLQETKLQPDQYPGEVFEALGYKSYLYS 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GVAIL+K +P + + + D + RFI A F L + ++Y P G Sbjct: 61 AQKKGYSGVAILTKREPDHVEYGMGMEAYDNEGRFIRADFG----DLSVVSVYHPSG-TS 115 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K+ W++ F ++ + + LI GDYNI +P D ++P+ ++ F E Sbjct: 116 GDERQAFKMGWLEDFQKYVMELQKSRPNLILCGDYNICHEPIDIHDPVRNATNSGFLPEE 175 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R+ + + G+ D+ R Y++W Y +S +KNKG RID+ M+S LL A Sbjct: 176 REWMTRFLSAGYVDSFRTLCPEKQEYTWWSYRFNSRAKNKGWRIDYCMVSEPVRPLLKRA 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261 I + SDH P+ + + Sbjct: 236 YILNEA----VHSDHCPMALEI 253 >gi|254468067|ref|ZP_05081473.1| exodeoxyribonuclease III [beta proteobacterium KB13] gi|207086877|gb|EDZ64160.1| exodeoxyribonuclease III [beta proteobacterium KB13] Length = 256 Score = 198 bits (503), Expect = 7e-49, Method: Composition-based stats. Identities = 79/259 (30%), Positives = 136/259 (52%), Gaps = 4/259 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + +WNVNS++ R + L I ++NPD+I LQETK++D+NFP E+ +L Y GQK Sbjct: 1 MKIISWNVNSLKIRHNQLVDIINKHNPDVISLQETKSQDENFPIESFNNLGYQSIFTGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 ++NGVAI++K I+ ++P + + + + + I N Y P+G + S K Sbjct: 61 TFNGVAIITKLPFENILLNIPNFQDEQKRFVSA-EVKFDDRKIIIMNGYFPNGQSLDSDK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K SW+ + GD+NI P DC++P W + R F Sbjct: 120 FIYKQSWVNAL---LKFIKTKNSDSLLMGDFNIAPDDIDCHDPEKWVGTVLTSDIERNLF 176 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +++ FTD R + +++WDY ++ +N G+RIDHI+ S + + L + + Sbjct: 177 KEIIECNFTDTHRYLNKNEPGFTWWDYRMAAFRRNLGLRIDHILASHDLINFLKDFSVLS 236 Query: 244 KPRGWTKPSDHTPVIVSLD 262 R +PSDH P++++L+ Sbjct: 237 DYRKLERPSDHAPIMLTLN 255 >gi|54309891|ref|YP_130911.1| exonuclease III [Photobacterium profundum SS9] gi|46914330|emb|CAG21109.1| putative exodeoxyribonuclease III [Photobacterium profundum SS9] Length = 268 Score = 198 bits (503), Expect = 7e-49, Method: Composition-based stats. Identities = 80/268 (29%), Positives = 132/268 (49%), Gaps = 9/268 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V ++N+N +RAR+H L A I+++ PD+I LQE K D FP ++++ Y + GQK Sbjct: 1 MKVISFNINGLRARLHQLQALIEKHQPDVIGLQEIKVHDDAFPLADVEAMGYKVYHHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLD-VQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121 ++ GVA+L K +P+ I P DD D + + + + + + N Y P G ++ Sbjct: 61 AHYGVAMLCKQEPVNIQKGFPTDDEDAQRRMIMATFEQEDGKKVTVLNGYFPQGENLSHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175 TK+ K + + + + EE +I GD NI P + F Sbjct: 121 TKFPAKEKFYADLMNYLNTHHTNEEEVIVMGDINISPIDLDIGIGPANAKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 L R+ + L + GFTD R H +S++DY + + N+G+RID ++ +P + Sbjct: 181 QLIEREWLKTLMDWGFTDTFRQLHPDVDDQFSWFDYRSKGFVDNRGLRIDVVLATPSLAA 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 A ID + RG KPSDH P+ + Sbjct: 241 RCIDAGIDYELRGIEKPSDHAPIWSTFK 268 >gi|254994979|ref|ZP_05277169.1| exodeoxyribonuclease III (xthA2) [Anaplasma marginale str. Mississippi] gi|255003123|ref|ZP_05278087.1| exodeoxyribonuclease III (xthA2) [Anaplasma marginale str. Puerto Rico] gi|255004249|ref|ZP_05279050.1| exodeoxyribonuclease III (xthA2) [Anaplasma marginale str. Virginia] Length = 284 Score = 198 bits (503), Expect = 7e-49, Method: Composition-based stats. Identities = 91/273 (33%), Positives = 145/273 (53%), Gaps = 13/273 (4%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ + TWNVNS+R R+ +L + + E++ DI LQETK D FP L+ L Y G Sbjct: 8 RMIRILTWNVNSVRKRVAHLCSVLTEHHVDIALLQETKCTDDQFPLAELEDLGYKCYIHG 67 Query: 62 QKSYNGVAILSKYQPIEIVTH-------------LPGDDLDVQARFIEATFTINTQTLRI 108 QKS NGVAILSKY + + + G +AR++E +R+ Sbjct: 68 QKSRNGVAILSKYPIVGELCNTVFDAEEEIGTVQDTGSYSVTEARYLECLVDYQDVKVRV 127 Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168 ++Y+P+G + + + K+++++ + L E+ L+ GDYN+ P D Y+ Sbjct: 128 ASVYVPNGQEVDTETFVYKLNFLRCLKARLLKLLAREDWLVIGGDYNVAPDDIDVYDAQA 187 Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 + CF + R +++ ++GFTDA R H+ +S+W+Y SW +N+G+RIDH++L Sbjct: 188 LDGKLCFHPKERAGLREILHLGFTDAFRILHEGKQEFSWWNYREGSWQRNRGMRIDHLLL 247 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 SP A L I + RG PSDH PV+ L Sbjct: 248 SPNAVDKLVECSILSSVRGLESPSDHAPVMCVL 280 >gi|46908012|ref|YP_014401.1| exodeoxyribonuclease [Listeria monocytogenes str. 4b F2365] gi|47094151|ref|ZP_00231871.1| exodeoxyribonuclease [Listeria monocytogenes str. 4b H7858] gi|217964070|ref|YP_002349748.1| exodeoxyribonuclease III [Listeria monocytogenes HCC23] gi|226224385|ref|YP_002758492.1| 3'-exo-deoxyribonuclease exoA [Listeria monocytogenes Clip81459] gi|254826392|ref|ZP_05231393.1| exodeoxyribonuclease [Listeria monocytogenes FSL J1-194] gi|254933631|ref|ZP_05266990.1| exodeoxyribonuclease [Listeria monocytogenes HPB2262] gi|255521086|ref|ZP_05388323.1| 3'-exo-deoxyribonuclease exoA [Listeria monocytogenes FSL J1-175] gi|300766428|ref|ZP_07076383.1| exodeoxyribonuclease [Listeria monocytogenes FSL N1-017] gi|46881282|gb|AAT04578.1| exodeoxyribonuclease [Listeria monocytogenes serotype 4b str. F2365] gi|47017476|gb|EAL08289.1| exodeoxyribonuclease [Listeria monocytogenes str. 4b H7858] gi|217333340|gb|ACK39134.1| exodeoxyribonuclease III [Listeria monocytogenes HCC23] gi|225876847|emb|CAS05556.1| Putative 3'-exo-deoxyribonuclease exoA [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|293585194|gb|EFF97226.1| exodeoxyribonuclease [Listeria monocytogenes HPB2262] gi|293595632|gb|EFG03393.1| exodeoxyribonuclease [Listeria monocytogenes FSL J1-194] gi|300512852|gb|EFK39944.1| exodeoxyribonuclease [Listeria monocytogenes FSL N1-017] gi|307571362|emb|CAR84541.1| exodeoxyribonuclease [Listeria monocytogenes L99] gi|328466425|gb|EGF37573.1| exodeoxyribonuclease III [Listeria monocytogenes 1816] Length = 251 Score = 198 bits (503), Expect = 7e-49, Method: Composition-based stats. Identities = 65/262 (24%), Positives = 112/262 (42%), Gaps = 13/262 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + +E + DI CLQETK ++ + +Y + Sbjct: 1 MKLISWNVNGLRAAVKKGFLEYFEEVDADIFCLQETKLQEGQIELDLPAYKDY-WNYAVK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +P+ + L + D + R I F + Sbjct: 60 KGYSGTAIFTKVEPLSVQYGLGVPEHDTEGRVITLEFEEFFMVTVYTPNSQAELKRLDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + + L+ +P++ GD N+ + D NP +A F+ E R Sbjct: 120 M------TFEDAILEYVKNLDKTKPVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F + GF D+ R + YS+W Y ++ ++N G RID+ ++S L A+I Sbjct: 174 FSAFLDAGFIDSFRYFYPDLTDAYSWWSYRMNARARNTGWRIDYFVVSERLKDKLVDAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 G SDH PV + L++ Sbjct: 234 HADVLG----SDHCPVELELNL 251 >gi|116052214|ref|YP_788942.1| putative exonuclease III [Pseudomonas aeruginosa UCBPP-PA14] gi|115587435|gb|ABJ13450.1| putative exonuclease III [Pseudomonas aeruginosa UCBPP-PA14] Length = 266 Score = 198 bits (503), Expect = 7e-49, Method: Composition-based stats. Identities = 103/270 (38%), Positives = 156/270 (57%), Gaps = 5/270 (1%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 M + +AT+NVN I+ R+ L AW++ PDI+CLQE KT D FP L+ Y Sbjct: 1 MDTLKIATFNVNGIQTRLAALLAWLEREAPDIVCLQELKTPDARFPAAALERAGYGAIWQ 60 Query: 61 GQKSYNGVAILSKY-QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 GQ ++NGVAIL++ QP+E+ LPG+ D +R++EA L + +LYLP+GNP Sbjct: 61 GQSAWNGVAILARDSQPLEVRRGLPGNASDPHSRYLEAAVDG----LLVASLYLPNGNPQ 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K+D K++W + +R A++ +E P++ AGD+N++P D Y+ W+ DA E Sbjct: 117 PGPKFDYKLAWFEHLIRHAAELMESGHPVVLAGDFNVVPSDFDIYDTRSWKKDALLQPES 176 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R+ F++L G+ DA+R +Y+FWDY+ W ++ G+RIDH++LS L A Sbjct: 177 RECFERLLRQGWVDALRQRFPDRRIYTFWDYFRQHWQRDAGLRIDHLLLSASLADHLEDA 236 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKK 269 +D RG SDH P VSL P ++ Sbjct: 237 GVDRWVRGEEHASDHAPAWVSLRRPSEPRR 266 >gi|49082810|gb|AAT50805.1| PA4172 [synthetic construct] Length = 267 Score = 198 bits (503), Expect = 7e-49, Method: Composition-based stats. Identities = 103/270 (38%), Positives = 155/270 (57%), Gaps = 5/270 (1%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 M + +AT+NVN I+ R+ L AW++ PDI+CLQE KT D FP L+ Y Sbjct: 1 MDTLKIATFNVNGIQTRLAALLAWLEREAPDIVCLQELKTPDARFPAAALEKAGYGAIWQ 60 Query: 61 GQKSYNGVAILSKY-QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 GQ ++NGVAIL++ QP+E+ LPG+ D +R++EA L + +LYLP+GNP Sbjct: 61 GQSAWNGVAILARDSQPLEVRRGLPGNASDPHSRYLEAAVDG----LLVASLYLPNGNPQ 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K+D K++W + +R A++ +E P++ AGD+N++ D Y+ W+ DA E Sbjct: 117 PGPKFDYKLAWFEHLIRHAAELMESGHPVVLAGDFNVVLSDFDIYDTRSWKKDALLQPES 176 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R+ F++L G+ DA+R LY+FWDY+ W ++ G+RIDH++LS L A Sbjct: 177 RECFERLLRQGWVDALRQRFPDRRLYTFWDYFRQHWQRDAGLRIDHLLLSASLADHLEDA 236 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKK 269 +D RG SDH P VSL P ++ Sbjct: 237 GVDRWVRGEEHASDHAPAWVSLRRPSEPRR 266 >gi|237714559|ref|ZP_04545040.1| exodeoxyribonuclease [Bacteroides sp. D1] gi|262406425|ref|ZP_06082974.1| exodeoxyribonuclease III [Bacteroides sp. 2_1_22] gi|294643303|ref|ZP_06721129.1| exodeoxyribonuclease III [Bacteroides ovatus SD CC 2a] gi|229445328|gb|EEO51119.1| exodeoxyribonuclease [Bacteroides sp. D1] gi|262355128|gb|EEZ04219.1| exodeoxyribonuclease III [Bacteroides sp. 2_1_22] gi|292641426|gb|EFF59618.1| exodeoxyribonuclease III [Bacteroides ovatus SD CC 2a] gi|295083963|emb|CBK65486.1| exodeoxyribonuclease III [Bacteroides xylanisolvens XB1A] Length = 254 Score = 198 bits (503), Expect = 8e-49, Method: Composition-based stats. Identities = 81/262 (30%), Positives = 137/262 (52%), Gaps = 12/262 (4%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59 ++ + T+NVN +RA + L W+ + NPDI+CLQETK + +P E ++L Y ++ + Sbjct: 1 MMKIITYNVNGLRAAVSKGLPEWLAQENPDILCLQETKLQPDQYPGEVFEALGYKSYLYS 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GVAIL+K +P + + + D + RFI A F L + ++Y P G Sbjct: 61 AQKKGYSGVAILTKREPDHVEYGMGMEAYDNEGRFIRADFG----DLSVVSVYHPSG-TS 115 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K+ W++ F ++ + + LI GDYNI +P D ++P+ ++ F E Sbjct: 116 GDERQAFKMVWLEDFQKYVMELQKSRPNLILCGDYNICHEPIDIHDPVRNATNSGFLPEE 175 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R+ + + G+ D+ R Y++W Y +S +KNKG RID+ M+S LL A Sbjct: 176 REWMTRFLSAGYVDSFRTLCPEKQEYTWWSYRFNSRAKNKGWRIDYCMVSEPVRPLLKRA 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261 I + SDH P+ + + Sbjct: 236 YILNEA----VHSDHCPMALEI 253 >gi|254302413|ref|ZP_04969771.1| exodeoxyribonuclease III [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148322605|gb|EDK87855.1| exodeoxyribonuclease III [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 253 Score = 198 bits (503), Expect = 8e-49, Method: Composition-based stats. Identities = 74/262 (28%), Positives = 114/262 (43%), Gaps = 13/262 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN IRA I + E N DI CLQETK E L+ + + + Sbjct: 1 MKLISWNVNGIRAAIKKGFLDYFNEQNADIFCLQETKLSAGQLDLE-LKGYHQYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +P+ + L ++ D + R I F + Sbjct: 60 KGYSGTAIFTKQEPLSVSYGLGIEEHDKEGRVITLEFEKFYMVTVYTPNSKDELLRLDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + R + LE ++P++ GD N+ + D NP +A FT E R Sbjct: 120 M------VWEDEFRKYLKNLEKKKPVVVCGDLNVAHKEIDLKNPKTNRRNAGFTDEERGK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L + GF D R + +YS+W Y + N G RID+ ++S L A I Sbjct: 174 FTELLDSGFIDTFRYFYPNLEQVYSWWSYRGRARENNAGWRIDYFVVSKGLEKNLVDAEI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 ++ G SDH PV++ LD+ Sbjct: 234 HSQIEG----SDHCPVVLFLDL 251 >gi|111073593|emb|CAL29439.1| exodeoxyribonuclease III [Wolbachia endosymbiont of Onchocerca volvulus] Length = 259 Score = 198 bits (503), Expect = 8e-49, Method: Composition-based stats. Identities = 95/259 (36%), Positives = 145/259 (55%), Gaps = 1/259 (0%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 ++ +ATWNVNSIR RI + I +N DII LQETK +K FP+E ++ L Y GQ Sbjct: 1 MLKIATWNVNSIRKRIDQICNLIIDNQIDIILLQETKCTEKQFPYEEIKKLGYKCAVYGQ 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 + NGV +LSKY +E + + +AR+IE + Q +R+ ++Y+P+G S Sbjct: 61 VARNGVCVLSKYLILEKFK-IDIVEGYQEARYIECVVKYDNQKIRVVSIYVPNGQSPDSN 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + K+ + L+ EE I AGDYN+ D ++PI+ CF + R+ Sbjct: 120 AFAYKLKFFDNLYEKIINLLKNEELTIVAGDYNVALDGIDVFDPILLNGKVCFHIREREK 179 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 + + N+GF DA R ++ +++W Y +S+ N+G+RID+I+LSP+A L + ID Sbjct: 180 LRAILNLGFKDAFRISNPDLQQFTWWHYQDNSFRNNQGMRIDYILLSPQAADRLETCYID 239 Query: 243 TKPRGWTKPSDHTPVIVSL 261 K R PSDHTPVI + Sbjct: 240 DKLRKLKNPSDHTPVICVI 258 >gi|300703904|ref|YP_003745506.1| exodeoxyribonuclease III [Ralstonia solanacearum CFBP2957] gi|299071567|emb|CBJ42891.1| EXODEOXYRIBONUCLEASE III [Ralstonia solanacearum CFBP2957] Length = 269 Score = 198 bits (503), Expect = 8e-49, Method: Composition-based stats. Identities = 92/266 (34%), Positives = 140/266 (52%), Gaps = 8/266 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPD-----IICLQETKTEDKNFPFETLQSLNYHIE 58 + VATWNVNS++ R+ ++ W+ E D ++CLQE K D +P L + Y Sbjct: 1 MRVATWNVNSLKVRLPHVLQWLAEREADATPIDLLCLQELKLPDDRYPLAELDAAGYASL 60 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDV---QARFIEATFTINTQTLRIGNLYLPH 115 GQK+YNGVAIL++ + + + Q R + AT+ + +R+ + Y P+ Sbjct: 61 FTGQKTYNGVAILARKAAMPEGRDVVKNIPGFADEQQRIVAATYDVAGGPVRVISAYFPN 120 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 G + S K K+ W+ + + L+ GD+NI P D ++P WE Sbjct: 121 GQALDSDKMVYKMRWLAALQDWLKAEMVAHPRLMLLGDFNIAPDDRDVHDPKKWEGMNLV 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 + E R +F+ L++ G DA R L+S+WDY ++ +N G+RIDHI+LSPE Sbjct: 181 SPEERAAFRALESAGLVDAFRMFDQADKLFSWWDYRLFAFRRNAGLRIDHILLSPELAQR 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 S ID PRGW +PSDHTPV+ +L Sbjct: 241 CESCHIDRVPRGWEQPSDHTPVVAAL 266 >gi|301163534|emb|CBW23085.1| exodeoxyribonuclease [Bacteroides fragilis 638R] Length = 253 Score = 198 bits (503), Expect = 8e-49, Method: Composition-based stats. Identities = 84/261 (32%), Positives = 140/261 (53%), Gaps = 12/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60 + + T+NVN +RA + L W+ E NPD++CLQETK + + +P E ++L Y ++ + Sbjct: 1 MKIITYNVNGLRAAVNKGLPEWLAEENPDVLCLQETKLQPEQYPAEAFEALGYKAYLYSA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GVAIL+K +P I + ++ D + RFI A F L + ++Y P G Sbjct: 61 QKKGYSGVAILTKVEPDHIEYGMGIEEYDNEGRFIRADFG----DLSVVSVYHPSG-TSG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K+ W++ F ++ ++ + LI GDYNI +P D ++P+ ++ F E R Sbjct: 116 DERQAFKMVWLEAFQKYVTELRKSRPNLILCGDYNICHEPIDIHDPVRNATNSGFLPEER 175 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + + + GF D+ R + Y++W Y +S +KNKG RID+ M+S SLL A Sbjct: 176 EWMTRFLSAGFIDSFRTLYPQKQEYTWWSYRFNSRAKNKGWRIDYCMVSEPVRSLLKEAV 235 Query: 241 IDTKPRGWTKPSDHTPVIVSL 261 I SDH P+ + + Sbjct: 236 ILNNA----VHSDHCPMALEI 252 >gi|298385343|ref|ZP_06994901.1| exodeoxyribonuclease III [Bacteroides sp. 1_1_14] gi|298261484|gb|EFI04350.1| exodeoxyribonuclease III [Bacteroides sp. 1_1_14] Length = 254 Score = 198 bits (503), Expect = 8e-49, Method: Composition-based stats. Identities = 82/263 (31%), Positives = 139/263 (52%), Gaps = 12/263 (4%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59 ++ + T+NVN +RA + L W+ + NPDI+CLQETK + +P E ++L Y ++ + Sbjct: 1 MMKIITYNVNGLRAAVSKGLPEWLVQENPDILCLQETKLQPDQYPAEVFEALGYKAYLYS 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GVAIL+K +P + + + D + RFI A F L + ++Y P G Sbjct: 61 AQKKGYSGVAILTKQEPDHVEYGMGIEAYDNEGRFIRADFG----DLSVVSVYHPSG-TS 115 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K+ W++ F ++ ++ + LI GDYNI +P D ++P+ ++ F E Sbjct: 116 GDERQAFKMVWLEDFQKYVTELRKTRPNLILCGDYNICHEPIDIHDPVRNATNSGFLPEE 175 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R+ + + GF D+ R + Y++W Y +S +KNKG RID+ M S +L SA Sbjct: 176 REWMTRFLSAGFIDSFRLLYPEKQEYTWWSYRFNSRAKNKGWRIDYCMTSEPVRPMLKSA 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 I SDH P+ + ++ Sbjct: 236 SILNDA----VHSDHCPMALEIE 254 >gi|148556812|ref|YP_001264394.1| exodeoxyribonuclease III [Sphingomonas wittichii RW1] gi|148502002|gb|ABQ70256.1| Exodeoxyribonuclease III [Sphingomonas wittichii RW1] Length = 271 Score = 198 bits (503), Expect = 8e-49, Method: Composition-based stats. Identities = 97/260 (37%), Positives = 143/260 (55%), Gaps = 5/260 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+N+N I+AR+ L W+++ PD+ CLQE KT D+ FP +++ Y GQK Sbjct: 14 MKIATFNINGIKARLPRLVEWLEQKAPDVACLQEIKTSDETFPIAEIEAAGYGAIWHGQK 73 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVAIL+K DD D + + ++YLP+GNP K Sbjct: 74 GFNGVAILAKGAQPVERRKGLPDDPDPSHS---RYIEAEVNGVVVASIYLPNGNPAPGPK 130 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP--HDCYNPIIWENDACFTLEVRQ 181 +D K++W R + A+ E P++ AGDYN+IP P D ++ +DA E R Sbjct: 131 FDYKLAWFDRLIDHAADLWAGEMPVVLAGDYNVIPTPSTDDVFSERAMASDALTQPESRA 190 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +F++L N G+TDA+R H +Y+FWDY A +W ++ G RIDH+MLSP A L A + Sbjct: 191 AFRRLCNAGWTDAVRTIHPHGPVYTFWDYQAGAWQRDAGFRIDHLMLSPAAADRLTGAGV 250 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 D R K SDH P ++L Sbjct: 251 DKDTRALEKASDHAPTWITL 270 >gi|163753486|ref|ZP_02160610.1| exodeoxyribonuclease III [Kordia algicida OT-1] gi|161327218|gb|EDP98543.1| exodeoxyribonuclease III [Kordia algicida OT-1] Length = 253 Score = 198 bits (503), Expect = 8e-49, Method: Composition-based stats. Identities = 73/264 (27%), Positives = 124/264 (46%), Gaps = 15/264 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY---HIET 59 + + ++NVN IRA I W+++ NPD++C+QETK + + E + Y + + Sbjct: 1 MKIISYNVNGIRAAIRKGFLEWLQQANPDVLCIQETKAQKEQLDLEAFEQAGYKYNYWYS 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GVAIL K +P +V + +D + R + + + I ++YLP G Sbjct: 61 AQKKGYSGVAILCKEEPNNVVYGTGIETMDFEGRNLRVDYD----NISIMSMYLPSGTND 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + + + ++ + GDYNI + D +NP + + F E Sbjct: 117 ARLNFKFQYMDEIKEYLANLRKEIPNL--VVCGDYNICHEEIDIHNPK-MKGVSGFLPEE 173 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R + GF D+ R + H YS+W Y A++ + NKG RID+ M+ + A Sbjct: 174 RAWIGSFIDSGFIDSFRHLNKEPHHYSWWSYRANARANNKGWRIDYNMVGKALKDNITRA 233 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 I + K SDH P++V +DI Sbjct: 234 TILPEA----KHSDHCPILVEIDI 253 >gi|170703657|ref|ZP_02894392.1| exodeoxyribonuclease III Xth [Burkholderia ambifaria IOP40-10] gi|170131435|gb|EDT00028.1| exodeoxyribonuclease III Xth [Burkholderia ambifaria IOP40-10] Length = 271 Score = 198 bits (503), Expect = 8e-49, Method: Composition-based stats. Identities = 84/256 (32%), Positives = 134/256 (52%), Gaps = 1/256 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ R ++ WI + D++CLQE K D+ +P L+++ Y GQ+ Sbjct: 14 MKIATWNVNSLNVRKQHVLDWIAHSGTDVLCLQELKLPDEKYPRADLEAIGYRSWFTGQR 73 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAIL + + + ++ + + + +RI + Y P+G S K Sbjct: 74 TYNGVAILVRDT-LAVDESDVVRNIPGFDDPQQRVIAVTVEGVRIVSAYFPNGQSPDSDK 132 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W+ + S ++ L GDYNI P+ D ++P WE + + R F Sbjct: 133 FVYKMQWLDALHAWLSAEMQRYPKLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHF 192 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 KL +GF DA R +++WDY ++ +N G+RIDHI+LSP + S +D Sbjct: 193 AKLLELGFVDAFRCFEQPEKTFTWWDYRMLAFRRNAGLRIDHILLSPALAANCTSCEVDR 252 Query: 244 KPRGWTKPSDHTPVIV 259 PR W +PSDHTPV+ Sbjct: 253 LPRTWEQPSDHTPVVA 268 >gi|188991692|ref|YP_001903702.1| Exodeoxyribonuclease III [Xanthomonas campestris pv. campestris str. B100] gi|167733452|emb|CAP51653.1| Exodeoxyribonuclease III [Xanthomonas campestris pv. campestris] Length = 367 Score = 198 bits (502), Expect = 9e-49, Method: Composition-based stats. Identities = 96/262 (36%), Positives = 159/262 (60%), Gaps = 5/262 (1%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64 T+AT+NVN I +R+ +L W++ PDI+ LQE K+ + FP + ++ Y + GQ+S Sbjct: 18 TIATYNVNGIASRLPHLLQWLQREQPDIVGLQELKSTQEAFPEQAIRDAGYGVIWQGQRS 77 Query: 65 YNGVAILSKY-QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVA+L++ +P+EI LP D D Q+R++EA + +G LYLP+GNP K Sbjct: 78 WNGVALLARGAEPVEIRRGLPWDPADTQSRYLEAAI----HGVIVGCLYLPNGNPQPGPK 133 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 +D K+ W +R LR A+ + L P+ GD+N++P Y+P W DA E R ++ Sbjct: 134 FDYKLKWFQRLLRHAATLVALPHPVALIGDFNVVPTDAHIYDPKGWRKDALLQPESRAAY 193 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +L G+TD+++A H +Y+FWDY+ +++++G+RIDH++L+ + L A +D Sbjct: 194 AQLLAQGWTDSLQAIHGDAPVYTFWDYFRQHFARDRGLRIDHLLLNRTLAAGLRDAGVDK 253 Query: 244 KPRGWTKPSDHTPVIVSLDIPE 265 R K SDH P +++D+P+ Sbjct: 254 WVRALEKASDHAPTWITVDVPD 275 >gi|111221323|ref|YP_712117.1| putative exodeoxyribonuclease III [Frankia alni ACN14a] gi|111148855|emb|CAJ60533.1| Putative exodeoxyribonuclease III [Frankia alni ACN14a] Length = 298 Score = 198 bits (502), Expect = 9e-49, Method: Composition-based stats. Identities = 82/285 (28%), Positives = 127/285 (44%), Gaps = 13/285 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFP---FETLQSLNYHIETC 60 + +ATWN+NS +AR L W+ PD++CLQETK D F E L Y + Sbjct: 1 MRIATWNINSAKARQARLIEWLDRAGPDVVCLQETKLSDDAFLELFDEDLFRRGYRVAHH 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 G +NGVAILS+ ++V LPG T + +R+ +LY+P+G + Sbjct: 61 GDGRWNGVAILSRGSLDDVVRGLPGGPGFPDPEPRAIAATCDG--VRVWSLYVPNGRTVD 118 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 Y K+SW+ + + + GD+NI P D ++ +E T R Sbjct: 119 DPHYAYKLSWLAALRDVVAAEVTRGPLM-TLGDFNIAPTDADVWDVAQFEGATHVTPAER 177 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + +L + G D +R +Y++WDY + KN G+RID + S + + + Sbjct: 178 AALGELVDAGLVDVLRTRWPDDVVYTYWDYRQLCFPKNFGMRIDLTLASADVADRVRAVW 237 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI-------PEPRKKQQDSTSQNM 278 +D R T SDH PVIV LD+ P ++ Sbjct: 238 VDRAARKGTGTSDHAPVIVDLDVAPDGDVGPMVPPPSSRGSTGRA 282 >gi|261868358|ref|YP_003256280.1| exonuclease III [Aggregatibacter actinomycetemcomitans D11S-1] gi|3132266|dbj|BAA28143.1| deoxynuclease [Actinobacillus actinomycetemcomitans] gi|261413690|gb|ACX83061.1| exodeoxyribonuclease III [Aggregatibacter actinomycetemcomitans D11S-1] Length = 267 Score = 198 bits (502), Expect = 9e-49, Method: Composition-based stats. Identities = 79/267 (29%), Positives = 122/267 (45%), Gaps = 8/267 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +RAR H L I + PD++ LQE K D+ FP++ + L YH+ GQK Sbjct: 1 MKIMSFNINGLRARPHQLEEIINKYQPDVLGLQEIKVADEVFPYDLVDHLGYHVNHFGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122 + GVA+LSK P+ + P DD + Q R I L + N Y P G Sbjct: 61 GHYGVALLSKQAPLSVRKGFPTDDEEAQKRIIMIDLETKFGQLTVINGYFPQGESREHPT 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + R+ Q + P+I GD NI P + + F Sbjct: 121 KFPAKQKFYADLQRYLEQDHNAQNPVIIMGDMNISPSDLDIGIGEENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +Q+L G D R + T + +S++DY + + N+G+RIDHI+ + + Sbjct: 181 PEEREWYQRLYAYGLEDTFRHMNPTVNDKFSWFDYRSKGFDDNRGLRIDHILANKALVAH 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262 I R KPSDH P+ Sbjct: 241 CVDTGIALDIRAMNKPSDHAPIWAEFK 267 >gi|171318534|ref|ZP_02907685.1| exodeoxyribonuclease III Xth [Burkholderia ambifaria MEX-5] gi|171096276|gb|EDT41183.1| exodeoxyribonuclease III Xth [Burkholderia ambifaria MEX-5] Length = 271 Score = 198 bits (502), Expect = 9e-49, Method: Composition-based stats. Identities = 84/256 (32%), Positives = 134/256 (52%), Gaps = 1/256 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ R ++ WI + D++CLQE K D+ +P L+++ Y GQ+ Sbjct: 14 MKIATWNVNSLNVRKQHVLDWIAHSGTDVLCLQELKLPDEKYPRADLEAIGYRSWFTGQR 73 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAIL + + + ++ + + + +RI + Y P+G S K Sbjct: 74 TYNGVAILVRDT-LAVDESDVVRNIPGFDDPQQRVVAVTVEGVRIVSAYFPNGQSPDSDK 132 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W+ + S ++ L GDYNI P+ D ++P WE + + R F Sbjct: 133 FVYKMQWLDALHAWLSAEMQRYPKLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHF 192 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 KL +GF DA R +++WDY ++ +N G+RIDHI+LSP + S +D Sbjct: 193 AKLLELGFVDAFRRFEQPEKTFTWWDYRMLAFRRNAGLRIDHILLSPALAANCTSCEVDR 252 Query: 244 KPRGWTKPSDHTPVIV 259 PR W +PSDHTPV+ Sbjct: 253 LPRTWEQPSDHTPVVA 268 >gi|47097522|ref|ZP_00235061.1| exodeoxyribonuclease [Listeria monocytogenes str. 1/2a F6854] gi|224503787|ref|ZP_03672094.1| exodeoxyribonuclease III [Listeria monocytogenes FSL R2-561] gi|254832537|ref|ZP_05237192.1| 3'-exo-deoxyribonuclease exoA [Listeria monocytogenes 10403S] gi|254901191|ref|ZP_05261115.1| 3'-exo-deoxyribonuclease exoA [Listeria monocytogenes J0161] gi|254914076|ref|ZP_05264088.1| exodeoxyribonuclease [Listeria monocytogenes J2818] gi|254938390|ref|ZP_05270087.1| exodeoxyribonuclease [Listeria monocytogenes F6900] gi|47014105|gb|EAL05099.1| exodeoxyribonuclease [Listeria monocytogenes str. 1/2a F6854] gi|258611002|gb|EEW23610.1| exodeoxyribonuclease [Listeria monocytogenes F6900] gi|293592096|gb|EFG00431.1| exodeoxyribonuclease [Listeria monocytogenes J2818] Length = 251 Score = 198 bits (502), Expect = 9e-49, Method: Composition-based stats. Identities = 65/262 (24%), Positives = 113/262 (43%), Gaps = 13/262 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + +E + DI CLQETK ++ + L + + + Sbjct: 1 MRLISWNVNGLRAAVKKGFLEYFEEVDADIFCLQETKLQEGQIELD-LPAYKDYWNYAVK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +P+ + L + D + R I F + Sbjct: 60 KGYSGTAIFTKVEPLSVQYGLGIPEHDTEGRVITLEFEEFFMVTVYTPNSQAELKRLDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + + L+ +P++ GD N+ + D NP +A F+ E R Sbjct: 120 M------TFEDAILEYVKNLDKTKPVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F + GF D+ R + YS+W Y ++ ++N G RID+ ++S L A+I Sbjct: 174 FSAFLDAGFIDSFRYFYPDLTDAYSWWSYRMNARARNTGWRIDYFVVSERLKDKLVDAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 G SDH PV + L++ Sbjct: 234 HADVLG----SDHCPVELELNL 251 >gi|154490204|ref|ZP_02030465.1| hypothetical protein PARMER_00436 [Parabacteroides merdae ATCC 43184] gi|154089096|gb|EDN88140.1| hypothetical protein PARMER_00436 [Parabacteroides merdae ATCC 43184] Length = 253 Score = 198 bits (502), Expect = 9e-49, Method: Composition-based stats. Identities = 76/260 (29%), Positives = 132/260 (50%), Gaps = 12/260 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60 + + T+NVN +RA + L W+ + PD++CLQETK + + +P E ++L Y + + Sbjct: 1 MKIITYNVNGLRAAVGKGLPEWLAQEQPDVLCLQETKLQPEQYPAEAFEALGYKAWLFSA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GVAILS+ +P + + + D + RFI A F L + ++Y P G Sbjct: 61 QKKGYSGVAILSRREPDHVEYGMGIEKYDNEGRFIRADFG----DLSVISVYHPSG-TSG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K+ W++ F + + + LI GDYNI +P D ++P+ ++ F E R Sbjct: 116 DERQAFKMEWLEDFQNYVVELQKSRPKLILCGDYNICHEPIDIHDPVRNATNSGFLPEER 175 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + + + G+ D R + Y++W Y + +KNKG RID+ M+S + + A Sbjct: 176 EWMTRFLDAGYIDTFRLLNPDKQEYTWWSYRFSARAKNKGWRIDYCMVSEPMKAQVEKAY 235 Query: 241 IDTKPRGWTKPSDHTPVIVS 260 I + SDH P ++ Sbjct: 236 ILNEA----VHSDHCPAVIE 251 >gi|325917489|ref|ZP_08179695.1| Exodeoxyribonuclease III [Xanthomonas vesicatoria ATCC 35937] gi|325536283|gb|EGD08073.1| Exodeoxyribonuclease III [Xanthomonas vesicatoria ATCC 35937] Length = 259 Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 91/259 (35%), Positives = 141/259 (54%), Gaps = 6/259 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A+WNVNS+ R+ +L W+ + PD++ +QETK ED FP L +L Y CGQK Sbjct: 1 MKIASWNVNSLNVRLPHLQQWLTDFAPDVVGIQETKLEDHKFPDAALAALGYRSVFCGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAILS+ +++ +PG D Q +RI NLY+ +G + + K Sbjct: 61 TYNGVAILSRAPALDVQMGIPGFDDVQQRVIAATVDG-----VRIINLYVVNGQDVGTDK 115 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN-DACFTLEVRQS 182 Y K+ W++ + +Q L+ L+ GD+NI P D ++P++W + R + Sbjct: 116 YAYKLRWLEAVHDWIAQELQRHPQLVVLGDFNIAPDARDVHDPVVWNEAHILTSAAERAA 175 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 +KL +G DA R HD +S+WDY ++ +N G+RID ++S + A ID Sbjct: 176 LEKLLALGLHDAFRLHHDDAEQFSWWDYRQAAYRRNLGLRIDLTLVSDALRARAVGAGID 235 Query: 243 TKPRGWTKPSDHTPVIVSL 261 +PR W +PSDH P V L Sbjct: 236 REPRTWERPSDHAPAWVQL 254 >gi|313204342|ref|YP_004042999.1| exodeoxyribonuclease iii xth [Paludibacter propionicigenes WB4] gi|312443658|gb|ADQ80014.1| exodeoxyribonuclease III Xth [Paludibacter propionicigenes WB4] Length = 253 Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 78/262 (29%), Positives = 122/262 (46%), Gaps = 12/262 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60 + + ++NVN IRA + N W++ NPD++CLQETK + + Y ++ + Sbjct: 1 MKIISYNVNGIRAALSKNFQEWLQAENPDVLCLQETKAQPDQVDTMLFAEMGYTSYLHSA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GVAILSK P +V + D + R I A F L I +Y+P G+ Sbjct: 61 EKKGYSGVAILSKQAPDRVVVGMNNPVFDAEGRVIRADFG----DLSIVCVYIPSGS-SG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K+ ++ F F + + L+ GDYNI +P D +P + F E R Sbjct: 116 DERQAFKMQFLAAFGPFILELRKTRPNLVVCGDYNICHKPIDINHPERQNGVSGFLPEER 175 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + + G D+ R + YS+W Y + +N G RID+ ++ + L SA Sbjct: 176 AWLDQFELDGMVDSFRVFDKSAEKYSWWSYRGGARFRNVGWRIDYHWVTESLHTRLKSAA 235 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I T SDH PV V L+ Sbjct: 236 ILTDA----VHSDHCPVAVELN 253 >gi|311694667|gb|ADP97540.1| exonuclease III [marine bacterium HP15] Length = 270 Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 87/271 (32%), Positives = 134/271 (49%), Gaps = 11/271 (4%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 ++ ++NVNSIR R+H L A I PD I LQETK +D +FP E ++ L YH+ GQ Sbjct: 1 MM-FVSFNVNSIRTRLHQLEAVIDTLAPDFIGLQETKVQDDDFPVEAIRDLGYHVHFHGQ 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K++ GVA+LSK +P E++ P D D Q R I FT+N + L + N Y P G Sbjct: 60 KTHYGVALLSKAEPEEVIKGYPWDGEDSQRRLITGHFTVNGEKLTVINGYFPQGESRDHP 119 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175 K+ K + +R+ + + ++ GD NI P D + F Sbjct: 120 VKFPAKEKFYGDLMRYLDELKKAGGHVVVMGDMNISPTDKDIGIGADNAKRWLRTGKCSF 179 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKN--KGIRIDHIMLSPEA 232 E R+ ++++ G+TD R H +S++DY + + ++ +G+RID IM S Sbjct: 180 LPEEREWLGQVESRGYTDVFRHLHPDEADTFSWFDYRSKGFERDPKRGLRIDLIMASDSL 239 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 A + R +PSDH PV S ++ Sbjct: 240 LPKARKAGVSYDIRAMERPSDHCPVWASFEL 270 >gi|89069305|ref|ZP_01156668.1| probable exonuclease [Oceanicola granulosus HTCC2516] gi|89045181|gb|EAR51249.1| probable exonuclease [Oceanicola granulosus HTCC2516] Length = 255 Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 93/258 (36%), Positives = 138/258 (53%), Gaps = 3/258 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + VAT+N+N++R R+ NL W+ PD++CLQE KT D + P L Y GQ+ Sbjct: 1 MKVATYNINNVRKRLGNLLDWLAGAAPDVLCLQELKTADADLPRAALAEAGYQGVWRGQR 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 ++NGVAILS+ +V D + + IG LY P+GNP K Sbjct: 61 AWNGVAILSRGGAPVLVRDSL---PDDPDPRQARYLEAAVEGVLIGCLYAPNGNPCPGPK 117 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 YD K +W R + A+ L P + AGDYNI+P+P D Y+ ++ + E+R + Sbjct: 118 YDYKRAWTDRLVAHAADLLAAGVPAVLAGDYNIVPEPRDIYDTTSYDGSSLVQPEMRARY 177 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + L + G+TDA+RA Y+FWDY + ++ G+R+DH++LSP A L + ID Sbjct: 178 RSLLDAGWTDAVRALRPEGTAYTFWDYRRRRFERDGGLRLDHLLLSPPAAERLVAIGIDR 237 Query: 244 KPRGWTKPSDHTPVIVSL 261 + R + SDH PV V L Sbjct: 238 EARAREEASDHAPVWVEL 255 >gi|294664292|ref|ZP_06729661.1| exodeoxyribonuclease III [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292605941|gb|EFF49223.1| exodeoxyribonuclease III [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 330 Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 87/275 (31%), Positives = 146/275 (53%), Gaps = 3/275 (1%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64 +AT+NVN I +R+ +L W++ PDI+ LQE K+ FP + ++ Y + G+KS Sbjct: 7 KIATFNVNGIASRLPHLLEWLQREQPDIVGLQELKSTQSAFPKQAIRDAGYGVIWHGEKS 66 Query: 65 YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124 +NGVA+L++ + D + + LYLP+GNP K+ Sbjct: 67 WNGVALLARGTEPVEIRRGLPWDPRDTQS---RYLEAAIHGVVVACLYLPNGNPQPGPKF 123 Query: 125 DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ 184 D K++W +R +R A ++L P+ GD+N++P D Y+P W DA E R+++Q Sbjct: 124 DYKLAWFERLIRHAKTLVDLPHPVALIGDFNVVPTDADIYDPKGWRKDALLQPESREAYQ 183 Query: 185 KLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK 244 L G+TD++ A H +Y+FWDY+ +++++G+RIDH++L+ L A +D Sbjct: 184 TLLAQGWTDSLPAIHGQTPIYTFWDYFRQHFARDRGLRIDHLLLNRTLGPGLQDAGVDKW 243 Query: 245 PRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMK 279 R K SDH P +S+ +P+ + T+ K Sbjct: 244 VRALEKASDHAPTWISVRVPDAPAEAAPDTTPVAK 278 >gi|325578563|ref|ZP_08148663.1| exodeoxyribonuclease III [Haemophilus parainfluenzae ATCC 33392] gi|325159799|gb|EGC71929.1| exodeoxyribonuclease III [Haemophilus parainfluenzae ATCC 33392] Length = 267 Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 80/267 (29%), Positives = 126/267 (47%), Gaps = 8/267 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A I++ PD+I LQE K D++FP+ + YH+ GQK Sbjct: 1 MKFISFNINGLRARPHQLEAIIEKYQPDVIGLQEIKVADEDFPYTITDNWGYHVFHHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122 + GVA+L+K +P + P D+ D Q R I A L + N Y P G T Sbjct: 61 GHYGVALLTKKEPKAVRRGFPTDNEDAQKRIIMADLETPFGLLTVINGYFPQGESRAHET 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + R+ Q + P++ GD NI P + + F Sbjct: 121 KFPAKEKFYADLQRYLEQDHDKANPVLIMGDMNISPTDLDIGIGDENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +Q+L + G D R + T + +S++DY + + N+G+RIDHI+++ + Sbjct: 181 PEEREWYQRLYDYGLEDTFRKLNPTVNDKFSWFDYRSKGFDDNRGLRIDHILVNHQLAER 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262 I R KPSDH P+ Sbjct: 241 CVDVGIALDIRAMEKPSDHAPIWAEFK 267 >gi|225010201|ref|ZP_03700673.1| exodeoxyribonuclease III Xth [Flavobacteria bacterium MS024-3C] gi|225005680|gb|EEG43630.1| exodeoxyribonuclease III Xth [Flavobacteria bacterium MS024-3C] Length = 254 Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 78/264 (29%), Positives = 131/264 (49%), Gaps = 14/264 (5%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY---HIET 59 + + ++NVN IRA + W++ NPD++CLQETK ++ Y + + Sbjct: 1 MKIISYNVNGIRAALKKGFLDWLQGANPDVLCLQETKAHKDQLDLSLFEAAGYPYHYWFS 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GVA+L K +P ++V D +D + R + + + I ++YLP G Sbjct: 61 AQKKGYSGVAVLCKTKPEDVVYGTGIDYMDFEGRNLLVRYPG----ISIMSMYLPSGTNQ 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 D K +++ FL + E + L+ GDYNI Q D ++P+ +N + F E Sbjct: 117 DR--LDFKFNYMDDFLDYTKSLKETDPNLVICGDYNICHQAIDIHDPVRNKNISGFLPEE 174 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R L GFTD+ R + YS+W Y A+S + NKG R+D+ ++S + + +A Sbjct: 175 RAWLSALLESGFTDSFRQINTAPDQYSWWSYRANSRANNKGWRLDYALVSKPLDTQILNA 234 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 +I + SDH PV V + + Sbjct: 235 QILSAA----VHSDHCPVTVEISL 254 >gi|150024176|ref|YP_001295002.1| exodeoxyribonuclease III [Flavobacterium psychrophilum JIP02/86] gi|149770717|emb|CAL42181.1| Exodeoxyribonuclease III [Flavobacterium psychrophilum JIP02/86] Length = 253 Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 85/263 (32%), Positives = 121/263 (46%), Gaps = 14/263 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY---HIET 59 + + ++NVN IRA I W++ NPD+ICLQE K P + + + Y + + Sbjct: 1 MKIISYNVNGIRAAITKGFIDWLQAANPDVICLQEIKATQDQIPTDAITAAGYPYQYYFS 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GVAIL K +P IV D +D + R I F L I +LYLP G I Sbjct: 61 AQKKGYSGVAILCKTEPKNIVFGTEIDHMDFEGRNIRVDFD----DLSIMSLYLPSGTNI 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 D K ++ F + + LI GDYNI + D +NP + F E Sbjct: 117 ER--LDHKFMFMDDFQNYINNLKTKIPNLIICGDYNICHEAIDIHNPTQNAKTSGFLPEE 174 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R GF D+ R + H YS+W Y A + NKG RID+ ++S + A Sbjct: 175 RAWLDAFIKSGFVDSFRHFNKEPHHYSWWSYRAGARGNNKGWRIDYNLVSETLKERIKRA 234 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 I K SDH PV+V ++ Sbjct: 235 IILPDA----KHSDHCPVLVEVE 253 >gi|319760561|ref|YP_004124499.1| exodeoxyribonuclease III [Candidatus Blochmannia vafer str. BVAF] gi|318039275|gb|ADV33825.1| exodeoxyribonuclease III [Candidatus Blochmannia vafer str. BVAF] Length = 274 Score = 198 bits (502), Expect = 1e-48, Method: Composition-based stats. Identities = 81/267 (30%), Positives = 125/267 (46%), Gaps = 7/267 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L I + PD++ LQETK + FP + ++ YH+ GQK Sbjct: 1 MRFVSFNINGLRARTHQLDQLINKLQPDVLGLQETKVHNDLFPIKKIKKYGYHVYYDGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 Y+GVA+ K P+ + P + Q R I A T + +L + N Y P G S K Sbjct: 61 QYHGVALFLKKLPLIVTRGFPLNPCPYQKRIITAQITTSIGSLTVINGYFPQGENNQSEK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACFTL 177 + K + + + E L+ GD NI P D + I F Sbjct: 121 FIYKKQFYQNLKNYIQNNYSNESLLLIMGDMNISPTDLDVGIGKKNTDRWIKMGKCAFLP 180 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 E RQ L N G D R+ + + YS++ Y ++ + N+G+RID ++++ L Sbjct: 181 EERQWITDLMNWGLIDIYRSKYPYQNNRYSWFSYQSNGFKNNRGLRIDLVLVTQPLAHLC 240 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263 + I+ R T PSDH P+ V LDI Sbjct: 241 TCSGINYDIRNMTHPSDHAPIWVDLDI 267 >gi|295110263|emb|CBL24216.1| exodeoxyribonuclease III [Ruminococcus obeum A2-162] Length = 253 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 74/261 (28%), Positives = 113/261 (43%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN IRA I KE N D+ CLQETK + E L + + + Sbjct: 1 MKLISWNVNGIRACITKGFEDRFKELNADVFCLQETKCQQGQVELE-LPGYHQYWNYANR 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 + Y+G A+ +K +P+ +V + + D + R I F + Sbjct: 60 RGYSGTAVFTKKEPLSVVNGIGIEAHDKEGRVITLEFEEFYFVTVYTPNSQSELRRLEYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 +R +L+ ++P+I GD N+ Q D NP +A FT E R Sbjct: 120 M------EWERDFLAYLLKLQEKKPVICCGDMNVAHQEIDLKNPKTNRKNAGFTDEERAC 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F ++ GF D R + +YS+W Y + KN G RID+ ++SP L A I Sbjct: 174 FSRMLESGFVDTFRYFYPDKEGIYSWWSYRFKAREKNAGWRIDYFIVSPSLKDRLQDASI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 T+ G SDH PV + +D Sbjct: 234 HTEIMG----SDHCPVELDID 250 >gi|172061100|ref|YP_001808752.1| exodeoxyribonuclease III Xth [Burkholderia ambifaria MC40-6] gi|171993617|gb|ACB64536.1| exodeoxyribonuclease III Xth [Burkholderia ambifaria MC40-6] Length = 271 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 84/256 (32%), Positives = 135/256 (52%), Gaps = 1/256 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ R ++ WI + D++CLQE K D+ +P L+++ Y GQ+ Sbjct: 14 MKIATWNVNSLNVRKQHVLDWIAHSGTDVLCLQELKLPDEKYPRADLEAIGYRSWFTGQR 73 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAIL++ + + ++ + + + +RI + Y P+G S K Sbjct: 74 TYNGVAILARDT-LAVDESDIVRNIPGFDDPQQRVIAVTVEGVRIVSAYFPNGQSPDSDK 132 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W+ + S ++ L GDYNI P+ D ++P WE + + R F Sbjct: 133 FVYKMQWLDALHAWLSAEMQRYPKLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHF 192 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 KL +GF DA R +++WDY ++ +N G+RIDHI+LSP + S +D Sbjct: 193 AKLLELGFVDAFRRFEQPEKTFTWWDYRMLAFRRNAGLRIDHILLSPALAANCTSCEVDR 252 Query: 244 KPRGWTKPSDHTPVIV 259 PR W +PSDHTPV+ Sbjct: 253 LPRTWEQPSDHTPVVA 268 >gi|16800960|ref|NP_471228.1| hypothetical protein lin1894 [Listeria innocua Clip11262] gi|16414395|emb|CAC97124.1| lin1894 [Listeria innocua Clip11262] gi|313623313|gb|EFR93545.1| exodeoxyribonuclease III [Listeria innocua FSL J1-023] Length = 251 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 65/262 (24%), Positives = 113/262 (43%), Gaps = 13/262 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + +E + DI CLQETK ++ + L + + + Sbjct: 1 MKLISWNVNGLRAAVKKGFLEYFEEVDADIFCLQETKLQEGQIELD-LPAYKDYWNYAVK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +P+ + L + D + R I F + Sbjct: 60 KGYSGTAIFTKVEPLSVQYGLGVPEHDTEGRVITLEFEDFYMVTVYTPNSQAELKRLDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + + L+ +P++ GD N+ + D NP +A F+ E R Sbjct: 120 M------TFEDAILEYVKNLDKTKPVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F + GF D+ R + YS+W Y ++ ++N G RID+ ++S L A+I Sbjct: 174 FSAFLDAGFIDSFRYFYPDLTDAYSWWSYRMNARARNTGWRIDYFVVSERLKDKLVDAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 G SDH PV + L++ Sbjct: 234 HADVLG----SDHCPVELELNL 251 >gi|326790354|ref|YP_004308175.1| exodeoxyribonuclease III [Clostridium lentocellum DSM 5427] gi|326541118|gb|ADZ82977.1| exodeoxyribonuclease III [Clostridium lentocellum DSM 5427] Length = 251 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 73/262 (27%), Positives = 111/262 (42%), Gaps = 13/262 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + + K + D+ C+QETK ++ E L + + Sbjct: 1 MKCVSWNVNGVRAVLTKGFLDYFKAVDADVFCIQETKCQEGQVEIE-LPGYYQYWNYAQK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G A+ SK +P+ + L + D + R I A F I Sbjct: 60 KGYSGTALFSKKEPLSVSYGLGIAEHDTEGRVITAEFEEAYVVTVYTPNAQNELARIDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + ++LE +P+I GD N+ Q D NP +A F+ E R Sbjct: 120 M------AWEDAFKAYLKKLEENKPVIICGDLNVAHQEIDLKNPKTNRGNAGFSDEERGK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L GF D R + YS+W Y + KN G RID+ + S L A I Sbjct: 174 FGELLEAGFIDTFRYFYPDLEGAYSWWSYRFKAREKNTGWRIDYFLASEVLKDKLVGAAI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 D + G SDH PVI+ ++I Sbjct: 234 DAEILG----SDHCPVILEINI 251 >gi|161510986|ref|YP_088240.2| exonuclease III [Mannheimia succiniciproducens MBEL55E] Length = 267 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 82/267 (30%), Positives = 122/267 (45%), Gaps = 8/267 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +RAR H L +++ PDII LQE K D+ FP E + L YH+ GQK Sbjct: 1 MKIISFNINGLRARPHQLDKIVEQYQPDIIGLQEIKVADEMFPHELVDHLGYHVYHHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122 + GVA+L K P + D D Q R I A F L + N Y P G T Sbjct: 61 GHYGVALLCKQAPKAVHKGFSTDTEDAQKRLIMADFETAFGALTVVNGYFPQGESRDHET 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + L + E +I GD NI P D + F Sbjct: 121 KFPAKEKFYADLLNYVKNEHNPESNIIIMGDMNISPTDLDIGIGEDSRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +Q+L G D R + T+ +S++DY + +++N+G+RIDHI+ + + Sbjct: 181 PEEREWYQRLYECGLEDTFRKLNPWTNDKFSWFDYRSKGFAENRGLRIDHILANSKLAER 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262 I R KPSDH P+ + Sbjct: 241 CVDTGIALDIRAMEKPSDHAPIWATFK 267 >gi|298375698|ref|ZP_06985655.1| exodeoxyribonuclease III [Bacteroides sp. 3_1_19] gi|298268198|gb|EFI09854.1| exodeoxyribonuclease III [Bacteroides sp. 3_1_19] Length = 284 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 81/265 (30%), Positives = 137/265 (51%), Gaps = 12/265 (4%) Query: 1 MSVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HI 57 + + + T+N N +RA + L W+ + PD++C+QETK + FP ET ++L Y ++ Sbjct: 29 LEKLKIITYNTNGLRAAVGKGLPEWLAQEQPDVLCIQETKLQPDQFPSETFETLGYKSYL 88 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 + +K Y+GVAIL+K +P I + + D + RF+ A F + I ++Y P G Sbjct: 89 FSAQKKGYSGVAILTKQEPDHIEYGMGIEKYDNEGRFLRADFG----DVSIVSVYHPSG- 143 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + D K+ W++ F ++ + + LI GDYNI +P D ++PI ++ F Sbjct: 144 TSGDERQDFKMIWLEDFQKYVVELQKSRPNLILCGDYNICHEPIDIHDPIRNAKNSGFLP 203 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 E R+ + + GFTD R + Y++W Y +S KNKG RID+ M+S + Sbjct: 204 EEREWMTRFLSAGFTDTFRFLNPDKQEYTWWSYRFNSRFKNKGWRIDYCMVSDNMKPKVK 263 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLD 262 +A I SDH P ++ ++ Sbjct: 264 AAYILNDA----VHSDHCPAVLEIE 284 >gi|319407432|emb|CBI81083.1| exodeoxyribonuclease III [Bartonella sp. 1-1C] Length = 260 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 136/259 (52%), Positives = 179/259 (69%), Gaps = 1/259 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+ I+AR L W+++N PDI CLQE K+ D+NFP +T+++L YHIET GQK Sbjct: 1 MKIATWNIAGIKARHETLCKWLEQNQPDIACLQEIKSVDENFPRDTIENLGYHIETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 S+NGVAILSK P E++ LPGD+ D QAR+IE ++ N ++R+ +LYLP+GNPI S K Sbjct: 61 SFNGVAILSKKVPDEVILRLPGDNNDKQARYIETVYSTNIGSIRVASLYLPNGNPINSEK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y KI W+KR A L EEPLI AGDYN+IP P D NP W NDA F ++RQ F Sbjct: 121 YLYKIEWMKRLYTHAKSLLAYEEPLILAGDYNVIPTPLDAKNPQEWSNDALFLPQIRQIF 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q + ++GF DAIR D +SFWD+ A++W KN GIRIDH++LSPEA L A T Sbjct: 181 QCITHLGFYDAIRNVTDAP-SFSFWDFQANAWKKNNGIRIDHLLLSPEAADQLICAYSQT 239 Query: 244 KPRGWTKPSDHTPVIVSLD 262 + RG+ KPSDH P+ + L+ Sbjct: 240 EVRGYQKPSDHVPIWIELN 258 >gi|209695422|ref|YP_002263351.1| exonuclease III [Aliivibrio salmonicida LFI1238] gi|208009374|emb|CAQ79647.1| exodeoxyribonuclease III [Aliivibrio salmonicida LFI1238] Length = 268 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 79/268 (29%), Positives = 128/268 (47%), Gaps = 9/268 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V ++N+N +RAR+H L A I ++NPD+I LQE K + FP E ++++ Y++ GQK Sbjct: 1 MKVISFNINGLRARLHQLQAIIDKHNPDVIGLQEIKVHNDMFPVEAVEAMGYNVYFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121 ++ GVA+L K +PI + + + + + + + N Y P G+ I Sbjct: 61 AHYGVAMLCKKEPISVQYGFDTDTEEHQKRMIMTTHERDDGSKVTVMNGYFPQGDSIKHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175 TK+ K + K + + +E LI GD NI P + F Sbjct: 121 TKFPYKRQFYKDLMIHLNTHHTNDEELIIMGDINISPIDADIGIGEPNAKRWLRTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R+ Q L++ GF D R H +S++DY + + N+G+RID +M +P Sbjct: 181 QPEEREWLQALKDWGFEDTFRNLHPEVTDQFSWFDYRSKGFVDNRGLRIDVVMATPSLAG 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 A ID + R KPSDH P+ + Sbjct: 241 KCTEAGIDYELRAIEKPSDHAPIWSTFK 268 >gi|315126445|ref|YP_004068448.1| exonuclease III [Pseudoalteromonas sp. SM9913] gi|315014959|gb|ADT68297.1| exonuclease III [Pseudoalteromonas sp. SM9913] Length = 268 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 77/268 (28%), Positives = 126/268 (47%), Gaps = 9/268 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V ++N+N +RAR+H L A I ++ PDII LQE K D+ FP + +Q + YH+ GQK Sbjct: 1 MKVISFNINGLRARLHQLQAIIDKHQPDIIGLQEIKVHDEAFPLDDVQKMGYHVYFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHL-PGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121 ++ GVA+L K +P ++ D + N + L + N Y P G+ I Sbjct: 61 AHYGVAMLCKKEPKSVLKGFSTDTDESQKRMISVTVEQENGRDLHVMNGYFPQGDNINHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175 TK+ K + + + + ++ +I GD NI P D + F Sbjct: 121 TKFPYKRQFYQDLMTHLNSHYTPDQDVIVMGDINISPTDLDIGIGEVNAKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 R+ L N GF D R + + YS++DY + + N+G+RID ++ + + + Sbjct: 181 QPVEREWLATLLNWGFKDTFREQNPETNDQYSWFDYRSKGFVDNRGLRIDVVLATHDLAA 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 ID + R KPSDH P+ + Sbjct: 241 RCIDTGIDYELRAIDKPSDHAPIWSEFN 268 >gi|115352233|ref|YP_774072.1| exodeoxyribonuclease III Xth [Burkholderia ambifaria AMMD] gi|115282221|gb|ABI87738.1| Exodeoxyribonuclease III [Burkholderia ambifaria AMMD] Length = 271 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 84/256 (32%), Positives = 135/256 (52%), Gaps = 1/256 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ R ++ WI + D++CLQE K D+ +P L+++ Y GQ+ Sbjct: 14 MKIATWNVNSLNVRKQHVLDWIAHSGTDVLCLQELKLPDEKYPRADLEAIGYRSWFTGQR 73 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAIL++ + + ++ + + + +RI + Y P+G S K Sbjct: 74 TYNGVAILARDT-LAVDESDIVRNIPGFDDPQQRVIAVTVEGVRIVSAYFPNGQSPESDK 132 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W+ + S ++ L GDYNI P+ D ++P WE + + R F Sbjct: 133 FVYKMQWLDALHAWLSAEMQRYPKLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHF 192 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 KL +GF DA R +++WDY ++ +N G+RIDHI+LSP + S +D Sbjct: 193 AKLLELGFVDAFRRFEQPEKTFTWWDYRMLAFRRNAGLRIDHILLSPALAANCTSCEVDR 252 Query: 244 KPRGWTKPSDHTPVIV 259 PR W +PSDHTPV+ Sbjct: 253 LPRTWEQPSDHTPVVA 268 >gi|253568552|ref|ZP_04845963.1| exodeoxyribonuclease [Bacteroides sp. 1_1_6] gi|251842625|gb|EES70705.1| exodeoxyribonuclease [Bacteroides sp. 1_1_6] Length = 254 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 82/263 (31%), Positives = 138/263 (52%), Gaps = 12/263 (4%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59 ++ + T+NVN +RA L W+ + NPDI+CLQETK + +P E ++L Y ++ + Sbjct: 1 MMKIITYNVNGLRAAASKGLPEWLVQENPDILCLQETKLQPDQYPAEVFEALGYKAYLYS 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GVAIL+K +P + + + D + RFI A F L + ++Y P G Sbjct: 61 AQKKGYSGVAILTKQEPDHVEYGMGIEAYDNEGRFIRADFG----DLSVVSVYHPSG-TS 115 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K+ W++ F ++ ++ + LI GDYNI +P D ++P+ ++ F E Sbjct: 116 GDERQAFKMVWLEDFQKYVTELRKTRPNLILCGDYNICHEPIDIHDPVRNATNSGFLPEE 175 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R+ + + GF D+ R + Y++W Y +S +KNKG RID+ M S +L SA Sbjct: 176 REWMTRFLSAGFIDSFRLLYPEKQEYTWWSYRFNSRAKNKGWRIDYCMTSEPVRPMLKSA 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 I SDH P+ + ++ Sbjct: 236 SILNDA----VHSDHCPMALEIE 254 >gi|117928676|ref|YP_873227.1| exodeoxyribonuclease III [Acidothermus cellulolyticus 11B] gi|117649139|gb|ABK53241.1| Exodeoxyribonuclease III [Acidothermus cellulolyticus 11B] Length = 282 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 81/282 (28%), Positives = 127/282 (45%), Gaps = 22/282 (7%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ AR+ L W+ PD++CLQETK FP E + Y + G Sbjct: 1 MRIATWNVNSVVARLPRLHEWLDTVRPDVVCLQETKCAGDAFPSEGIIERGYQVAAHGDG 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT------------------ 105 +NGVAILS+ E+ PG + + + Sbjct: 61 RWNGVAILSRIGLEEVTRGFPGQPGYAAPPAAPSPDSDDALLPAAAAEPVVEARAIGATC 120 Query: 106 --LRIGNLYLPHGNPITSTKYDDK--ISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161 +RI +LY+P+G + S Y K R A P I AGD+NI P Sbjct: 121 GGVRIWSLYVPNGRALDSPHYAYKLEWLAALRTALAAELARHSGRPFIVAGDFNIAPTDR 180 Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI 221 D ++P ++ T RQ+ Q + ++G D + +++WDY A + KN+G+ Sbjct: 181 DVWDPAVFVGSTHVTDAERQALQAICDLGLRDIFPRALKYDYPFTYWDYRAGMFPKNQGM 240 Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 RID ++ + A + + A +D + R PSDH P++V + Sbjct: 241 RIDLVLANDAAAAKVTDAYVDREARKGKGPSDHAPIVVDFAL 282 >gi|289666147|ref|ZP_06487728.1| exodeoxyribonuclease III [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289670759|ref|ZP_06491834.1| exodeoxyribonuclease III [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 259 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 88/259 (33%), Positives = 137/259 (52%), Gaps = 6/259 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A+WNVNS+ R+ +L W+ PD++ +QETK ED FP L L Y CGQK Sbjct: 1 MKIASWNVNSLNVRLPHLQQWLTAFAPDVVGIQETKLEDHKFPDAALAELGYRSVFCGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAILS+ +++ T +PG D Q +RI NLY+ +G + + K Sbjct: 61 TYNGVAILSRSPALDVQTGIPGFDDVQQRVIAATVDG-----VRIINLYVVNGQDVGTDK 115 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN-PIIWENDACFTLEVRQS 182 Y K+ W+ + +Q+L+ L+ GD+NI P D ++ + E+ + + R + Sbjct: 116 YAYKLRWLAAAHDWIAQQLQTYPQLVVLGDFNIAPDARDVHDATVWNEHHILTSTDERAA 175 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 +KL +G DA R +S+WDY + +N G+RID ++S + + ID Sbjct: 176 LEKLLALGLHDAFRLHPQAAEQFSWWDYRQAGFRRNLGLRIDLTLVSDALRTRAVESGID 235 Query: 243 TKPRGWTKPSDHTPVIVSL 261 +PR W +PSDH P V L Sbjct: 236 REPRTWERPSDHAPAWVRL 254 >gi|294141585|ref|YP_003557563.1| exodeoxyribonuclease III [Shewanella violacea DSS12] gi|293328054|dbj|BAJ02785.1| exodeoxyribonuclease III [Shewanella violacea DSS12] Length = 268 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 80/264 (30%), Positives = 128/264 (48%), Gaps = 9/264 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N IRAR+H L A I + PDII LQETK D+ FP ++++ Y + G K Sbjct: 1 MKIVSFNINGIRARLHQLQALIDAHQPDIIGLQETKAHDEVFPAADVEAMGYKVHYHGGK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLD-VQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121 ++ GVA+LSK +PI++ P D D + + N + L + N Y P G+ I+ Sbjct: 61 AHYGVAMLSKLEPIKVQKGFPTDSEDAQRRMIMATFTQENGRPLTVLNGYFPQGDNISHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175 TKY K + K + + ++ +E + GD NI P + F Sbjct: 121 TKYPAKRQFYKDLMTYLNENHTPDEDIAIIGDINISPMDLDIGIGEPNAKRWLRTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R+ + L + G D R H YS++DY + + N+G+RID ++ + Sbjct: 181 QPEEREWLKTLMDWGLVDTFRELHPERTERYSWFDYRSKGFVDNRGLRIDVVLATKSLNE 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVI 258 L + +D R KPSDH P+ Sbjct: 241 RLVESDVDYDLRAIEKPSDHAPIW 264 >gi|190576404|ref|YP_001974249.1| putative endonuclease/exonuclease/phosphatase family protein [Stenotrophomonas maltophilia K279a] gi|190014326|emb|CAQ47973.1| putative endonuclease/exonuclease/phosphatase family protein [Stenotrophomonas maltophilia K279a] Length = 255 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 86/259 (33%), Positives = 140/259 (54%), Gaps = 6/259 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A+WNVNS+ R+ +L W+++ PDI+ +QETK ED FP L + Y QK Sbjct: 1 MKIASWNVNSLNVRLPHLEQWLRDFGPDIVGIQETKLEDHKFPDSALIAAGYRSVFASQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVA+LS+ ++ +PG + + + LR+ NLY+ +G + + K Sbjct: 61 TYNGVALLSREPAQDVQIGIPGFEDEQKRVI-----AGTFGDLRVINLYVVNGQDVGTDK 115 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI-IWENDACFTLEVRQS 182 Y+ K+ W++ + +Q L+ LI GD+NI P D ++P EN + R + Sbjct: 116 YEYKLRWLQAVHAWIAQELQRHPKLIVMGDFNIAPDARDVHDPEVWNENHILTSTAERGA 175 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 QKL +G D R +D ++S+WDY A + +N G+RID ++S + ++ ID Sbjct: 176 LQKLLQLGLHDGFRLHNDEAGVFSWWDYRAAGFRRNLGLRIDLTLVSDALKAGAVASGID 235 Query: 243 TKPRGWTKPSDHTPVIVSL 261 +PR W +PSDH P V + Sbjct: 236 REPRTWERPSDHAPAWVEI 254 >gi|218259778|ref|ZP_03475367.1| hypothetical protein PRABACTJOHN_01026 [Parabacteroides johnsonii DSM 18315] gi|218224906|gb|EEC97556.1| hypothetical protein PRABACTJOHN_01026 [Parabacteroides johnsonii DSM 18315] Length = 253 Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats. Identities = 76/260 (29%), Positives = 131/260 (50%), Gaps = 12/260 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60 + + T+NVN +RA + L W+ + PD++CLQETK + +P E ++L Y + + Sbjct: 1 MKIITYNVNGLRAAVGKGLPEWLAQEQPDVLCLQETKLQPDQYPAEAFEALGYKAWLFSA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GVAILS+ +P + + + D + RFI A F L + ++Y P G Sbjct: 61 QKKGYSGVAILSRREPDHVEYGMGIEKYDNEGRFIRADFG----DLSVISVYHPSG-TSG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K+ W++ F + + + LI GDYNI +P D ++P+ ++ F E R Sbjct: 116 DERQAFKMEWLEDFQNYVVELQKSRPKLILCGDYNICHEPIDIHDPVRNATNSGFLPEER 175 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + + + G+ D R + Y++W Y + +KNKG RID+ M+S + + A Sbjct: 176 EWMTRFLDAGYIDTFRLLNPDKQEYTWWSYRFSARAKNKGWRIDYCMVSEPMKAQVEKAY 235 Query: 241 IDTKPRGWTKPSDHTPVIVS 260 I + SDH P ++ Sbjct: 236 ILNEA----VHSDHCPAVIE 251 >gi|170717538|ref|YP_001784627.1| exonuclease III [Haemophilus somnus 2336] gi|168825667|gb|ACA31038.1| exodeoxyribonuclease III [Haemophilus somnus 2336] Length = 267 Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats. Identities = 80/267 (29%), Positives = 123/267 (46%), Gaps = 8/267 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L +++ PD+I LQE K D++FP+ ++ L YHI GQK Sbjct: 1 MKFISFNINGLRARPHQLDRIVEKYQPDVIGLQEIKVSDEDFPYNLVEHLGYHIYHHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122 + GVA+L K +P I DD + Q R I A + L + N Y P G T Sbjct: 61 GHYGVALLLKQEPKVIRRGFSTDDENAQKRIIMADLETDFGLLTVINGYFPQGENRQHET 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + + Q + P++ GD NI P + + F Sbjct: 121 KFPAKEKFYADLQHYVEQEHDRNNPILIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +L N G D R + T + +S++DY + + N+G+RIDHI+++ Sbjct: 181 PEEREWINRLYNYGLIDTFRHKNPTINDQFSWFDYRSKGFDDNRGLRIDHILVNQLLLER 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262 A I R KPSDH P+ Sbjct: 241 CVDAGIAFDIRAMEKPSDHAPIWAEFK 267 >gi|83593119|ref|YP_426871.1| exodeoxyribonuclease III [Rhodospirillum rubrum ATCC 11170] gi|83576033|gb|ABC22584.1| Exodeoxyribonuclease III [Rhodospirillum rubrum ATCC 11170] Length = 266 Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats. Identities = 101/266 (37%), Positives = 149/266 (56%), Gaps = 5/266 (1%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 +V++AT+NVNS++AR+ NL W+ +PD+ LQE K D+ FP +++L Y + GQ Sbjct: 1 MVSIATFNVNSVKARLPNLLDWLGTRSPDVALLQEIKCLDEAFPRAEIEALGYRLAVHGQ 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF--TINTQTLRIGNLYLPHGNPIT 120 K+YNGVAILS+ E+ LPG D +A + + R+ LYLP+GNP+ Sbjct: 61 KAYNGVAILSRLPLSEVTARLPGLDGAPAEDDDQARYLEAVVDGRFRVCCLYLPNGNPVE 120 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLI---FAGDYNIIPQPHDCYNPIIWENDACFTL 177 + L + L + P GD+N+ P D Y+P W NDA Sbjct: 121 EDRKFGYKLAWMDRLIVRATHLMRDFPDTPVILGGDFNVCPDDLDVYDPAGWANDALCRP 180 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 E RQ F+ L +G+TDA+RA + L++FWDY A +W K+ G+RIDH++L+P A L Sbjct: 181 ETRQRFRALVFLGYTDALRALNPGAPLFTFWDYQAGAWQKDHGLRIDHLLLNPAAADRLS 240 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263 +A +D RG K SDH P V+L++ Sbjct: 241 AAGVDRATRGHAKSSDHAPSWVTLEL 266 >gi|58697046|ref|ZP_00372507.1| exodeoxyribonuclease III [Wolbachia endosymbiont of Drosophila simulans] gi|225630665|ref|YP_002727456.1| exodeoxyribonuclease III [Wolbachia sp. wRi] gi|58536687|gb|EAL59975.1| exodeoxyribonuclease III [Wolbachia endosymbiont of Drosophila simulans] gi|225592646|gb|ACN95665.1| exodeoxyribonuclease III [Wolbachia sp. wRi] Length = 259 Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 90/260 (34%), Positives = 149/260 (57%), Gaps = 1/260 (0%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 ++ +ATWNVNSIR R++ L ++I ++ DI+ LQE K ++ FP+ ++ L Y GQ Sbjct: 1 MLKIATWNVNSIRKRVNQLCSFIVDSQIDIVLLQEIKCTEEQFPYAEIEKLGYEYAIYGQ 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 + NGV +LSKY +E + + +AR+IE N Q +R+G++Y+P+G S Sbjct: 61 VARNGVCVLSKYPILEKFK-IDIVEGYQEARYIECIIKHNNQKVRVGSVYVPNGQSPDSQ 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 ++ K+ + S L+ EE I AGDYN+ P D ++ + CF + R+ Sbjct: 120 AFEYKLKFFDNLYERMSTLLKNEELTIIAGDYNVAPDEIDVFDSNLLNGQVCFHIREREK 179 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 + + N+GF DA R +H +++W Y +S N+G+RID+++LSP+A L + ID Sbjct: 180 LRAILNLGFKDAFRISHPNLQQFTWWHYQGNSLRNNQGMRIDYMLLSPQAVDKLETCYID 239 Query: 243 TKPRGWTKPSDHTPVIVSLD 262 + R PSDHTPV+ +++ Sbjct: 240 DRLRKLENPSDHTPVVCAIE 259 >gi|237740967|ref|ZP_04571448.1| exodeoxyribonuclease III [Fusobacterium sp. 4_1_13] gi|294784430|ref|ZP_06749721.1| exodeoxyribonuclease III [Fusobacterium sp. 3_1_27] gi|229431011|gb|EEO41223.1| exodeoxyribonuclease III [Fusobacterium sp. 4_1_13] gi|294488002|gb|EFG35357.1| exodeoxyribonuclease III [Fusobacterium sp. 3_1_27] Length = 253 Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 75/261 (28%), Positives = 113/261 (43%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN IRA I + E N DI CLQETK E L+ + + + Sbjct: 1 MKLISWNVNGIRAAIKKGFLDYFNEQNADIFCLQETKLSAGQLDLE-LKGYHQYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +P+ + L ++ D + R I F + Sbjct: 60 KGYSGTAIFTKQEPLTVSYGLGIEEHDKEGRVITLEFEKFYMVTVYTPNSKDELLRLDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + R + LE ++P++ GD N+ + D NP +A FT E R Sbjct: 120 M------TWEDEFRKYLKNLEKKKPVVVCGDLNVAHEEIDLKNPKTNRRNAGFTDEERGK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L + GF D R + +YS+W Y + N G RID+ ++S L A I Sbjct: 174 FTELLDSGFIDTFRYFYPNLEQVYSWWSYRGRARENNAGWRIDYFVVSKGLEKNLVDAEI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 T+ G SDH PV++ LD Sbjct: 234 HTQIEG----SDHCPVVLILD 250 >gi|34763743|ref|ZP_00144662.1| Exodeoxyribonuclease III [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27886479|gb|EAA23735.1| Exodeoxyribonuclease III [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 253 Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 75/261 (28%), Positives = 113/261 (43%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN IRA I + E N DI CLQETK E L+ + + + Sbjct: 1 MKLISWNVNGIRAAIKKGFLDYFNEQNADIFCLQETKLSAGQLDLE-LKGYHQYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +P+ + L ++ D + R I F + Sbjct: 60 KGYSGTAIFTKQEPLSVSYGLGIEEHDKEGRVITLEFEKFYMVTVYTPNSKDELLRLDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + R + LE ++P++ GD N+ + D NP +A FT E R Sbjct: 120 M------TWEDEFRKYLKNLEKKKPVVVCGDLNVAHEEIDLKNPKTNRRNAGFTDEERGK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L + GF D R + +YS+W Y + N G RID+ ++S L A I Sbjct: 174 FTELLDSGFVDTFRYFYPNLEQVYSWWSYRGRARENNAGWRIDYFVVSKGLEKNLVDAEI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 T+ G SDH PV++ LD Sbjct: 234 HTQIEG----SDHCPVVLILD 250 >gi|15678240|ref|NP_275355.1| exodeoxyribonuclease [Methanothermobacter thermautotrophicus str. Delta H] gi|2621258|gb|AAB84718.1| exodeoxyribonuclease [Methanothermobacter thermautotrophicus str. Delta H] Length = 257 Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 65/266 (24%), Positives = 110/266 (41%), Gaps = 12/266 (4%) Query: 1 MSVVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 M+V+ + +WNVN +RA W E PDI+CLQE K + P + Y Sbjct: 1 MTVLKIISWNVNGLRAVHRKGFLKWFMEEKPDILCLQEIKAAPEQLPRKLRHVEGYRSFF 60 Query: 60 CG--QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 +K Y+GVA+ +K P + + D + R A F + N+Y P+G Sbjct: 61 TPAERKGYSGVAMYTKVPPSSLREGFGVERFDTEGRIQIADFD----DFLLYNIYFPNGK 116 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 K+ + FL ++ + +I GD+N + D P N + F Sbjct: 117 MSEER-LKYKLEFYDAFLEDVNRERDSGRNVIICGDFNTAHREIDLARPKENSNVSGFLP 175 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 R K G+ D R + Y++W Y + +N G R+D+ ++ E + Sbjct: 176 VERAWIDKFIENGYVDTFRMFNSDPGQYTWWSYRTRARERNVGWRLDYFFVNEEFKGKVK 235 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263 + I + G SDH P+ + +++ Sbjct: 236 RSWILSDVMG----SDHCPIGLEIEL 257 >gi|312961228|ref|ZP_07775733.1| exodeoxyribonuclease III [Pseudomonas fluorescens WH6] gi|311284886|gb|EFQ63462.1| exodeoxyribonuclease III [Pseudomonas fluorescens WH6] Length = 264 Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 106/262 (40%), Positives = 152/262 (58%), Gaps = 5/262 (1%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 M + +AT+N+N +RAR+ N+ W+ PDI+CLQE K FP+ ++ Y Sbjct: 1 MKALKIATFNLNGLRARLPNVLQWLAREQPDIVCLQELKLPQSLFPYADFEAAGYGAICL 60 Query: 61 GQKSYNGVAILSKY-QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 GQ S+NGVAIL++ QP+E LPGDD D Q+R+IEA + +G LYLP+GNP Sbjct: 61 GQASWNGVAILARDAQPLESRRGLPGDDSDNQSRYIEAAV----HGVLVGCLYLPNGNPQ 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K+D K++W +R + +A E P++ AGD+N++P D YNP W DA E Sbjct: 117 PGPKFDYKLAWFERLIDYAGALQASEHPVLLAGDFNVVPTDLDIYNPRSWLKDALLQPES 176 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R +Q+L G+TDA+R + +Y+FWDY+ W KN G+RIDH++L+P T L A Sbjct: 177 RACYQRLLAQGWTDALRHLYPDERVYTFWDYFRQHWQKNSGLRIDHLLLNPALTPYLKDA 236 Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261 +D R SDH P + L Sbjct: 237 GVDAWVRNEPHASDHAPTWIQL 258 >gi|42520813|ref|NP_966728.1| exodeoxyribonuclease III [Wolbachia endosymbiont of Drosophila melanogaster] gi|42410553|gb|AAS14662.1| exodeoxyribonuclease III [Wolbachia endosymbiont of Drosophila melanogaster] Length = 259 Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 89/260 (34%), Positives = 147/260 (56%), Gaps = 1/260 (0%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 ++ +ATWNVNSIR R++ L ++I ++ DI+ LQE K ++ FP+ ++ L Y GQ Sbjct: 1 MLKIATWNVNSIRKRVNQLCSFIVDSQIDIVLLQEIKCTEEQFPYAEIEKLGYEYAIYGQ 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 + NGV +LSKY +E + + +AR+IE +R+G++Y+P+G S Sbjct: 61 VARNGVCVLSKYPILEKFK-IDIVESHQEARYIECVIKYTNSKIRVGSVYVPNGQSPDSH 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 ++ K+ + S L+ EE I AGDYNI P D ++ + CF + R+ Sbjct: 120 AFEYKLKFFDNLYERMSTLLKNEELTIIAGDYNIAPDEIDVFDSNLLNGQVCFHIREREK 179 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 + + N+GF DA R +H +++W Y +S N+G+RID+++LSP+A L + ID Sbjct: 180 LRAILNLGFKDAFRISHPNLQQFTWWHYQGNSLRNNQGMRIDYMLLSPQAVDKLETCYID 239 Query: 243 TKPRGWTKPSDHTPVIVSLD 262 + R PSDHTPV+ +++ Sbjct: 240 DRLRKLENPSDHTPVVCAIE 259 >gi|256820279|ref|YP_003141558.1| exodeoxyribonuclease III Xth [Capnocytophaga ochracea DSM 7271] gi|256581862|gb|ACU92997.1| exodeoxyribonuclease III Xth [Capnocytophaga ochracea DSM 7271] Length = 254 Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 83/260 (31%), Positives = 131/260 (50%), Gaps = 14/260 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY---HIET 59 + + ++NVN IRA + A W+K NPD++CLQE K + P E L Y + + Sbjct: 1 MKIISYNVNGIRAALTKGFAEWLKSANPDVLCLQEIKATEDQIPTEVFSELGYKYQYYHS 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GVAILSK +P + D +D + R + A F L + +LYLP G Sbjct: 61 AEKKGYSGVAILSKIEPKHVEIGTGIDYMDKEGRVLRADFET----LSVMSLYLPSGTNP 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 D K++++ F ++ + + L+ GDYNI + D ++PI N + F Sbjct: 117 DR--LDFKLTFMADFKKYIDKLKQKVPNLVICGDYNICHEAIDIHDPIRNANVSGFLPIE 174 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R+ K GF D+ R H H YS+W Y A++ + NKG RID+ ++S + + A Sbjct: 175 REWLDKFMKSGFIDSFRYFHKEAHQYSWWSYRANARNNNKGWRIDYHLVSAPLENRMERA 234 Query: 240 RIDTKPRGWTKPSDHTPVIV 259 I + K SDH P+++ Sbjct: 235 LILPEA----KHSDHCPILL 250 >gi|207724128|ref|YP_002254526.1| exodeoxyribonuclease III protein [Ralstonia solanacearum MolK2] gi|206589337|emb|CAQ36299.1| exodeoxyribonuclease III protein [Ralstonia solanacearum MolK2] Length = 269 Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 92/266 (34%), Positives = 141/266 (53%), Gaps = 8/266 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPD-----IICLQETKTEDKNFPFETLQSLNYHIE 58 + VATWNVNS++ R+ ++ W+ E D ++CLQE K D +P L + Y Sbjct: 1 MRVATWNVNSLKVRLPHVLQWLGEREADATPIDLLCLQELKLPDDRYPLAELDAAGYASL 60 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDV---QARFIEATFTINTQTLRIGNLYLPH 115 GQK+YNGVAIL++ + + + Q R + AT+ + +R+ + Y P+ Sbjct: 61 FTGQKTYNGVAILARKAAMPEGRDVIKNIPGFADEQQRIVAATYDVAGGPVRVISAYFPN 120 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 G + S K K+ W+ + ++ L+ GD+NI P D ++P WE Sbjct: 121 GQALDSDKMVYKMRWLAALQDWLKAEMDAHPRLMLLGDFNIAPDDRDVHDPKKWEGMNLV 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 + E R +F+ L++ G DA R L+S+WDY ++ +N G+RIDHI+LSPE Sbjct: 181 SPEERAAFRALESAGLVDAFRMFEQADKLFSWWDYRLFAFKRNAGLRIDHILLSPELAQR 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 S ID PRGW +PSDHTPV+ +L Sbjct: 241 CESCHIDRAPRGWEQPSDHTPVVAAL 266 >gi|99035972|ref|ZP_01315016.1| hypothetical protein Wendoof_01000152 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] Length = 259 Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 89/260 (34%), Positives = 146/260 (56%), Gaps = 1/260 (0%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 ++ +ATWNVNSIR R++ L ++I + DI+ LQE K ++ FP+ ++ L Y GQ Sbjct: 1 MLKIATWNVNSIRKRVNQLCSFIVNSQIDIVLLQEIKCTEEQFPYAEIEKLGYEYAIYGQ 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 + NGV +LSKY +E + + +AR+IE +R+G++Y+P+G S Sbjct: 61 VARNGVCVLSKYPILEKFK-IDIVESHQEARYIECVIKYTNSKIRVGSVYVPNGQSPDSH 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 ++ K+ + S L+ EE I AGDYNI P D ++ + CF + R+ Sbjct: 120 AFEYKLKFFDNLYERMSTLLKNEELTIIAGDYNIAPDEIDVFDSNLLNGQVCFHIREREK 179 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 + + N+GF DA R +H +++W Y +S N+G+RID+++LSP+A L + ID Sbjct: 180 LRAILNLGFKDAFRISHPNLQQFTWWHYQGNSLRNNQGMRIDYMLLSPQAVDKLETCYID 239 Query: 243 TKPRGWTKPSDHTPVIVSLD 262 + R PSDHTPV+ +++ Sbjct: 240 DRLRKLENPSDHTPVVCAIE 259 >gi|325919422|ref|ZP_08181448.1| Exodeoxyribonuclease III [Xanthomonas gardneri ATCC 19865] gi|325550088|gb|EGD20916.1| Exodeoxyribonuclease III [Xanthomonas gardneri ATCC 19865] Length = 326 Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 99/277 (35%), Positives = 158/277 (57%), Gaps = 5/277 (1%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64 +AT+NVN I +R+ +L W++ PDI+ LQE K + FP + ++ Y + G+KS Sbjct: 7 KIATFNVNGIHSRLPHLLEWLQREQPDIVGLQELKATQEAFPEQAIRDAGYGVIWQGEKS 66 Query: 65 YNGVAILSKY-QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVA+L++ P+EI LP D D Q+R++EA + + LYLP+GNP K Sbjct: 67 WNGVALLARGADPVEIRRGLPWDPGDRQSRYLEAAI----HGVVVACLYLPNGNPQPGPK 122 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 +D K++W +R +R A +EL P+ GD+N++P D Y+P W DA E RQ++ Sbjct: 123 FDYKLAWFQRLIRHAKTLVELPHPVALIGDFNVVPTDADIYDPKGWRKDALLQPESRQAY 182 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 L G+TD++ A H +Y+FWDY+ +++++G+RIDH++L+ L A +D Sbjct: 183 AALLQQGWTDSLLAVHGDTPIYTFWDYFRQHFARDRGLRIDHLLLNCTLAPGLQDAGVDK 242 Query: 244 KPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 R K SDH P +S+ +P+ + T KP Sbjct: 243 WVRALEKASDHAPTWISVRVPDAVAEAVVDTEAASKP 279 >gi|256846719|ref|ZP_05552175.1| exodeoxyribonuclease III [Fusobacterium sp. 3_1_36A2] gi|256717939|gb|EEU31496.1| exodeoxyribonuclease III [Fusobacterium sp. 3_1_36A2] Length = 253 Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 75/261 (28%), Positives = 113/261 (43%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN IRA I + E N DI CLQETK E L+ + + + Sbjct: 1 MKLISWNVNGIRAAIKKGFLDYFNEQNADIFCLQETKLSAGQLDLE-LKGYHQYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +P+ + L ++ D + R I F + Sbjct: 60 KGYSGTAIFTKQEPLSVSYGLGIEEHDKEGRVITLEFEKFYMVTVYTPNSKDELLRLDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + R + LE ++P++ GD N+ + D NP +A FT E R Sbjct: 120 M------TWEDEFRKYLKNLEKKKPVVVCGDLNVAHEEIDLKNPKTNRRNAGFTDEERGK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L + GF D R + +YS+W Y + N G RID+ ++S L A I Sbjct: 174 FTELLDSGFIDTFRYFYPNLEQVYSWWSYRGRARENNAGWRIDYFVVSKGLEKNLVDAEI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 T+ G SDH PV++ LD Sbjct: 234 HTQIEG----SDHCPVVLILD 250 >gi|332173328|gb|AEE22582.1| exodeoxyribonuclease III [Glaciecola agarilytica 4H-3-7+YE-5] Length = 269 Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 78/268 (29%), Positives = 130/268 (48%), Gaps = 9/268 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N IRAR+H L A I ++ PDII LQE K + FP ++++ Y + GQK Sbjct: 1 MKIISFNINGIRARLHQLKALIDKHQPDIIGLQEIKVHNDMFPVADVEAMGYKVYFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLD-VQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121 ++ GVA+L K +P ++ P DD D + + + N +T+R+ N Y P G + Sbjct: 61 AHYGVAMLCKEEPSDVQYGFPTDDEDAQRRMIMVSYPMPNGETVRVLNGYFPQGENRSHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175 TK+ K + + + + +E ++ GD NI + F Sbjct: 121 TKFPAKRKYYEDLSTYLNTHHTPDENVVVMGDVNISHTDLDIGIGEPNRKRWLQTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R L + GF+D R + + +S++DY + + N+G+RID I+ + + Sbjct: 181 LPEERLWLNDLIDWGFSDGFRTLNPETNEHFSWFDYRSKGFLDNRGLRIDLILATKKLHE 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 L A ID + RG KPSDH P+ Sbjct: 241 SLSDAGIDYELRGIEKPSDHAPIWAEYK 268 >gi|326331009|ref|ZP_08197308.1| exodeoxyribonuclease III [Nocardioidaceae bacterium Broad-1] gi|325951220|gb|EGD43261.1| exodeoxyribonuclease III [Nocardioidaceae bacterium Broad-1] Length = 260 Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 74/262 (28%), Positives = 124/262 (47%), Gaps = 8/262 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+NSIR+RI + A+++ ++ D++ LQETK + P L++ Y + + G Sbjct: 1 MRIATWNINSIRSRIDRVEAFVERHSIDVLALQETKAKPDQIPTMGLEARGYEVASVGYD 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVA++S+ +I G A +R+ ++Y+P+G Sbjct: 61 QWNGVALISRVGLSDIQVGFEGMPSFKDVAEARALTATCG-GVRVTSVYVPNGRKPDDPH 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W+ + + P GD+N+ P DC++P + T R + Sbjct: 120 YAYKLEWLAA--LQKAATAWYDGPSAMVGDWNVCPFDEDCFDPKQFVGKTHLTPAERDA- 176 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 F D +R Y+++DYY + +N+G+RID ++ SP S + A +D Sbjct: 177 FFAIEKDFKDVVRPFVPGPEAYTYFDYYRQRFERNRGLRIDFVLGSPSFASRVTDAFVDL 236 Query: 244 KPR----GWTKPSDHTPVIVSL 261 R G PSDH PVIV L Sbjct: 237 DERNPAIGTGAPSDHAPVIVDL 258 >gi|56416778|ref|YP_153852.1| exodeoxyribonuclease III [Anaplasma marginale str. St. Maries] gi|56388010|gb|AAV86597.1| exodeoxyribonuclease III [Anaplasma marginale str. St. Maries] Length = 276 Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 91/272 (33%), Positives = 145/272 (53%), Gaps = 13/272 (4%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 ++ + TWNVNS+R R+ +L + + E++ DI LQETK D FP L+ L Y GQ Sbjct: 1 MIRILTWNVNSVRKRVAHLCSVLTEHHVDIALLQETKCTDDQFPLAELEDLGYKCYIHGQ 60 Query: 63 KSYNGVAILSKYQPIEIVTH-------------LPGDDLDVQARFIEATFTINTQTLRIG 109 KS NGVAILSKY + + + G +AR++E +R+ Sbjct: 61 KSRNGVAILSKYPIVGELCNTVFDAEEEIGTVQDTGSYSVTEARYLECLVDYQDVKVRVA 120 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 ++Y+P+G + + + K+++++ + L E+ L+ GDYN+ P D Y+ Sbjct: 121 SVYVPNGQEVDTETFVYKLNFLRCLKARLLKLLAREDWLVIGGDYNVAPDDIDVYDAQAL 180 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 + CF + R +++ ++GFTDA R H+ +S+W+Y SW +N+G+RIDH++LS Sbjct: 181 DGKLCFHPKERAGLREILHLGFTDAFRILHEGKQEFSWWNYREGSWQRNRGMRIDHLLLS 240 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 P A L I + RG PSDH PV+ L Sbjct: 241 PNAVDKLVECSILSSVRGLESPSDHAPVMCVL 272 >gi|304320984|ref|YP_003854627.1| Exodeoxyribonuclease III [Parvularcula bermudensis HTCC2503] gi|303299886|gb|ADM09485.1| Exodeoxyribonuclease III [Parvularcula bermudensis HTCC2503] Length = 273 Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 104/264 (39%), Positives = 147/264 (55%), Gaps = 7/264 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++++NVNSI+AR+ + W + PD+ LQE K FP + YH+E GQK Sbjct: 1 MIISSFNVNSIKARLPRILEWFDDRQPDVTVLQEIKCVTDAFPAAPFEDRGYHVEVFGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVA+LSK P +++ +PG D D +R+G LYLP+GNP K Sbjct: 61 TYNGVALLSKTPPEDVLRGVPGFDDDNARYIEALIPHDQGAPVRVGGLYLPNGNPAPGPK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 YD K++W+ F A L EE + GDYN+IP P Y P W DA F LE R++F Sbjct: 121 YDYKLAWMAAFEDHARDLLAQEEAVCLLGDYNVIPDPSGVYAPDRWTEDALFRLETRKAF 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 ++L N+G+ DA+ D Y+FWDY +W K+ G+RIDH +LSP+A L +D Sbjct: 181 RRLLNLGYVDALAQVKDAP-FYTFWDYQRGAWDKDHGLRIDHCLLSPQAADRLTGGDVDR 239 Query: 244 KPRG------WTKPSDHTPVIVSL 261 + R KPSDH PV +S+ Sbjct: 240 QVRDPALGNQDAKPSDHVPVWISI 263 >gi|114562597|ref|YP_750110.1| exonuclease III [Shewanella frigidimarina NCIMB 400] gi|114333890|gb|ABI71272.1| Exodeoxyribonuclease III [Shewanella frigidimarina NCIMB 400] Length = 268 Score = 197 bits (500), Expect = 2e-48, Method: Composition-based stats. Identities = 84/267 (31%), Positives = 132/267 (49%), Gaps = 9/267 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N IRAR+H L A I ++PDII LQETK D+ FP ++++ Y + G K Sbjct: 1 MKIVSFNINGIRARLHQLQALIDSHSPDIIGLQETKVHDEAFPVADVEAMGYKVHYHGGK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLD-VQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121 ++ GVA+LSK +P+ ++ DD D + I N + L + N Y P G I Sbjct: 61 AHYGVAMLSKAEPVNVIKGFETDDEDAQRRLIIGQFKQDNGRILTVFNGYFPQGESIHHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175 TKY K + + + + +E + GD NI P D + F Sbjct: 121 TKYPAKRKFYQDLMVHLEKHHSADEDIAIIGDINISPTDLDIGIGEVNAKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R+ +LQ GF D+ R H YS++DY + + N+G+RID I+++ Sbjct: 181 QPEEREWLARLQQWGFIDSFRQLHPTRTERYSWFDYRSKGFDDNRGLRIDVILVTESMLP 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261 L + +D + RG KPSDH P+ + Sbjct: 241 RLVESDVDYELRGIDKPSDHAPIWSTF 267 >gi|255020178|ref|ZP_05292247.1| Exodeoxyribonuclease III [Acidithiobacillus caldus ATCC 51756] gi|254970320|gb|EET27813.1| Exodeoxyribonuclease III [Acidithiobacillus caldus ATCC 51756] Length = 258 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 82/259 (31%), Positives = 138/259 (53%), Gaps = 4/259 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + +WNVNS++ R+ + ++++ PD++CLQETK D FP + L+ Y GQ Sbjct: 1 MQITSWNVNSLKVRLPQVQTFLEKFQPDLLCLQETKLPDDRFPTDHLREQGYAALYHGQS 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVA+LS+ + + + QAR AT ++R+ N+Y+P+G + S K Sbjct: 61 AYNGVAMLSRAPLADPECGFADGEAEPQARLCAATCA----SVRVVNVYVPNGQALDSDK 116 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W+ + L L+ GD+NI P D ++ W D + R + Sbjct: 117 YAFKLRWLAALREYLRDALARWPRLVVLGDFNIAPGDGDVFDAAAWGEDILCSPAERAAL 176 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 L+++GF DA RA + +++WDY A S+ +N+G+RID I++S + + Sbjct: 177 TALEDLGFVDAYRALNPDGREFTWWDYRAASFRRNRGLRIDLILVSTALWPQVRQVLVHR 236 Query: 244 KPRGWTKPSDHTPVIVSLD 262 + RG +PSDH PV + L+ Sbjct: 237 EERGAERPSDHAPVSLFLE 255 >gi|319788428|ref|YP_004147903.1| exodeoxyribonuclease III [Pseudoxanthomonas suwonensis 11-1] gi|317466940|gb|ADV28672.1| exodeoxyribonuclease III [Pseudoxanthomonas suwonensis 11-1] Length = 256 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 89/259 (34%), Positives = 140/259 (54%), Gaps = 6/259 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + VA+WNVNS+ R+ +L W++ PDI+ LQETK ED FP TL +L Y GQK Sbjct: 1 MKVASWNVNSLNVRMPHLEQWLRAFAPDIVGLQETKLEDHKFPDSTLAALGYRSVFSGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAILS+ P +++ +PG + + + LR+ NLY+ +G + + K Sbjct: 61 TYNGVAILSREAPRDVLVGVPGFEHEHRRAISATIGD-----LRVVNLYVVNGQDVGTDK 115 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP-IIWENDACFTLEVRQS 182 Y+ K++W+ + Q L+ GD+NI P D ++P + E + R + Sbjct: 116 YELKLAWLAAVRTWLEQEAREHPRLVVLGDFNIAPDERDVHDPAVWNETHILTSAAERAA 175 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 + L +G D R HD ++S+WDY ++ +N G+RID ++S + +A ID Sbjct: 176 LRDLLALGLHDGYRLLHDEGGVFSWWDYRMAAFRRNLGLRIDLTLVSEALRGQVVAAGID 235 Query: 243 TKPRGWTKPSDHTPVIVSL 261 +PR W +PSDH P + L Sbjct: 236 REPRTWERPSDHAPAWIEL 254 >gi|227502024|ref|ZP_03932073.1| exodeoxyribonuclease III [Corynebacterium accolens ATCC 49725] gi|227077308|gb|EEI15271.1| exodeoxyribonuclease III [Corynebacterium accolens ATCC 49725] Length = 269 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 81/267 (30%), Positives = 133/267 (49%), Gaps = 8/267 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + TWN+NS+R R + ++ D++CLQETK +D FP + YH+ G Sbjct: 1 MRITTWNINSVRTRAQRALDLLHTHDIDVLCLQETKVKDDKFPRVAFEDAGYHVTCHGLN 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT-----QTLRIGNLYLPHGNP 118 +NGVAI+SK QP E+ T P + + + I +LY+P+G Sbjct: 61 QWNGVAIISKEQPEEVFTGFPHQPGFAKDPEKPQDREARALGARIRGVEIWSLYIPNGRE 120 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 IT YD K+ ++ + R+A+ R + + L+ GD+NI P+ D ++ + T Sbjct: 121 ITDRHYDYKLDFLYQLARYAAGRAQSK--LLLTGDFNIAPRDEDVWDIEAFRGKTHVTEP 178 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R +FQ L+ G + R + Y+++DY + KN+G+RID + SP + Sbjct: 179 ERAAFQMLEEAGLEEVTRRFTE-DQRYTYFDYKGMRFHKNEGMRIDFQLASPPLAKHVTG 237 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIPE 265 AR+D + R K SDH P+ D+P+ Sbjct: 238 ARVDMEERAGEKTSDHCPLHADFDLPD 264 >gi|160889848|ref|ZP_02070851.1| hypothetical protein BACUNI_02279 [Bacteroides uniformis ATCC 8492] gi|270294104|ref|ZP_06200306.1| exodeoxyribonuclease III [Bacteroides sp. D20] gi|317478856|ref|ZP_07938007.1| exodeoxyribonuclease III [Bacteroides sp. 4_1_36] gi|156860840|gb|EDO54271.1| hypothetical protein BACUNI_02279 [Bacteroides uniformis ATCC 8492] gi|270275571|gb|EFA21431.1| exodeoxyribonuclease III [Bacteroides sp. D20] gi|316905032|gb|EFV26835.1| exodeoxyribonuclease III [Bacteroides sp. 4_1_36] Length = 254 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 83/261 (31%), Positives = 137/261 (52%), Gaps = 12/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60 + + T+NVN +RA + W+ + PD++CLQETK + + +P E L +L Y ++ + Sbjct: 1 MKIITYNVNGLRAAVTKGFPEWLAQEQPDVLCLQETKLQPEQYPAEALDALGYKHYLYSA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GVAILSK +P + + ++ D + RFI A F + + ++Y P G Sbjct: 61 QKKGYSGVAILSKQEPDHVEYGMGIEEYDNEGRFIRADFG----DVSVVSVYHPSG-TSG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K+ W+++F + + LI GDYNI + D ++PI ++ F E R Sbjct: 116 DERQAFKMVWLEKFQEYVLELERTRPKLILCGDYNICHEAIDIHDPIRNATNSGFLPEER 175 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + + N GF D+ R H Y++W Y +S +KNKG RID+ M+S +L AR Sbjct: 176 EWMTRFLNAGFIDSFRWLHPDKQEYTWWSYRFNSRAKNKGWRIDYCMVSEPVRPMLKEAR 235 Query: 241 IDTKPRGWTKPSDHTPVIVSL 261 I G SDH P+++ + Sbjct: 236 IL----GDVVHSDHCPMLLEI 252 >gi|293392089|ref|ZP_06636423.1| exonuclease III [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952623|gb|EFE02742.1| exonuclease III [Aggregatibacter actinomycetemcomitans D7S-1] Length = 267 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 79/267 (29%), Positives = 122/267 (45%), Gaps = 8/267 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +RAR H L I + PD++ LQE K D+ FP++ + L YH+ GQK Sbjct: 1 MKIMSFNINGLRARPHQLEEIIHKYQPDVLGLQEIKVADEVFPYDLVDHLGYHVNHFGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122 + GVA+LSK P+ + P DD + Q R I L + N Y P G Sbjct: 61 GHYGVALLSKQVPLSVRKGFPTDDEEAQKRIIMIDLETKFGQLTVINGYFPQGESREHPT 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + R+ Q + P+I GD NI P + + F Sbjct: 121 KFPAKQKFYADLQRYLEQDHNAQNPVIIMGDMNISPSDLDIGIGEENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +Q+L G D R + T + +S++DY + + N+G+RIDHI+ + + Sbjct: 181 PEEREWYQRLYAYGLEDTFRHMNPTVNDKFSWFDYRSKGFDDNRGLRIDHILANKALVAH 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262 I R KPSDH P+ Sbjct: 241 CVDTGIALDIRAMNKPSDHAPIWAEFK 267 >gi|187929032|ref|YP_001899519.1| exodeoxyribonuclease III Xth [Ralstonia pickettii 12J] gi|187725922|gb|ACD27087.1| exodeoxyribonuclease III Xth [Ralstonia pickettii 12J] Length = 269 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 95/266 (35%), Positives = 144/266 (54%), Gaps = 8/266 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPD-----IICLQETKTEDKNFPFETLQSLNYHIE 58 + VATWNVNS++ R+ ++ W+ E D ++CLQE K D +P L + Y Sbjct: 1 MRVATWNVNSLKVRLPHVLQWLAEREADATPIDLLCLQELKLPDDRYPLAELDAAGYTSL 60 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDV---QARFIEATFTINTQTLRIGNLYLPH 115 GQK+YNGVAILS+ + + + Q R + AT+ ++ +R+ + Y+P+ Sbjct: 61 FTGQKTYNGVAILSRKASVPEGRDVVKNIPGFADEQQRIVAATYDVDGGPVRVISAYIPN 120 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 G + S K+ K+ W++ + + L L+ GD+NI P+ D ++P WE Sbjct: 121 GQALDSDKFVYKLRWLEALQAWLTSELAANPRLMLLGDFNIAPEDRDVHDPKKWEGQNLV 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 + E R +F+ +Q G DA R L+S+WDY + +N G+RIDHIMLSPE L Sbjct: 181 SPEERAAFRAMQGAGLVDAFRMFEQEDKLFSWWDYRMFGFKRNAGLRIDHIMLSPELAKL 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 S ID PR W +PSDHTPV+ +L Sbjct: 241 CESCHIDRVPRTWEQPSDHTPVVAAL 266 >gi|120437855|ref|YP_863541.1| exodeoxyribonuclease [Gramella forsetii KT0803] gi|117580005|emb|CAL68474.1| exodeoxyribonuclease [Gramella forsetii KT0803] Length = 253 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 82/263 (31%), Positives = 128/263 (48%), Gaps = 14/263 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY---HIET 59 +T+ ++NVN IRA I W++++NPD++CLQE K + + + Y + Sbjct: 1 MTIISYNVNGIRAAIRKGFLDWLQQSNPDVVCLQEIKAQPEQLDLSEFEKAGYPYHYWYP 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GVAILSK +P + D +D + R I A F + +LYLP G I Sbjct: 61 ANKKGYSGVAILSKTEPKNVTYGTGIDYMDFEGRSIRADFD----NFSVMSLYLPSGTNI 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K F R+ Q LI +GDYNI + D ++P+ +N + F E Sbjct: 117 NRLELKFKFMD--DFQRYIDQLKLEIPNLIISGDYNICHEAIDIHDPVRLKNVSGFLPEE 174 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R+ GF D+ R ++ YS+W Y A++ + NKG RID+ ++S L A Sbjct: 175 RKWIDGFMENGFIDSFRHFNEDPDNYSWWSYRANARNNNKGWRIDYNLVSEPLKDRLRRA 234 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 I + SDH PV+V ++ Sbjct: 235 VILPEAY----HSDHCPVLVEIE 253 >gi|299146132|ref|ZP_07039200.1| exodeoxyribonuclease III [Bacteroides sp. 3_1_23] gi|298516623|gb|EFI40504.1| exodeoxyribonuclease III [Bacteroides sp. 3_1_23] Length = 253 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 82/261 (31%), Positives = 136/261 (52%), Gaps = 12/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60 + + T+NVN +RA + L W+ + NPDI+CLQETK + +P E ++L Y ++ + Sbjct: 1 MKIITYNVNGLRAAVSKGLPEWLAQENPDILCLQETKLQPDQYPGEVFEALGYKSYLYSA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GVAIL+K +P + + + D + RFI A F L + ++Y P G Sbjct: 61 QKKGYSGVAILTKQEPDHVEYGMGMEAYDNEGRFIRADFG----DLSVVSVYHPSG-TSG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K+ W++ F ++ + + LI GDYNI +P D ++P+ ++ F E R Sbjct: 116 DERQAFKMVWLEDFQKYVMELQKSRPNLILCGDYNICHEPIDIHDPVRNATNSGFLPEER 175 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + + + G+ DA R Y++W Y +S +KNKG RID+ M+S LL A Sbjct: 176 EWMTRFLSAGYVDAFRTLCPEKQEYTWWSYRFNSRAKNKGWRIDYCMVSEPVRPLLKRAY 235 Query: 241 IDTKPRGWTKPSDHTPVIVSL 261 I + SDH P+ + + Sbjct: 236 ILNEA----VHSDHCPMALEI 252 >gi|237719516|ref|ZP_04549997.1| exodeoxyribonuclease [Bacteroides sp. 2_2_4] gi|260174497|ref|ZP_05760909.1| exodeoxyribonuclease [Bacteroides sp. D2] gi|293370159|ref|ZP_06616719.1| exodeoxyribonuclease III [Bacteroides ovatus SD CMC 3f] gi|315922764|ref|ZP_07919004.1| exodeoxyribonuclease [Bacteroides sp. D2] gi|229451376|gb|EEO57167.1| exodeoxyribonuclease [Bacteroides sp. 2_2_4] gi|292634656|gb|EFF53185.1| exodeoxyribonuclease III [Bacteroides ovatus SD CMC 3f] gi|313696639|gb|EFS33474.1| exodeoxyribonuclease [Bacteroides sp. D2] Length = 253 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 81/261 (31%), Positives = 136/261 (52%), Gaps = 12/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60 + + T+NVN +RA + L W+ + NPDI+CLQETK + +P E ++L Y ++ + Sbjct: 1 MKIITYNVNGLRAAVSKGLPEWLAQENPDILCLQETKLQPDQYPGEVFEALGYKSYLYSA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GVAIL+K +P + + + D + RFI A F L + ++Y P G Sbjct: 61 QKKGYSGVAILTKQEPDHVEYGMGMEAYDNEGRFIRADFG----DLSVVSVYHPSG-TSG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K+ W++ F ++ + + LI GDYNI +P D ++P+ ++ F E R Sbjct: 116 DERQAFKMVWLEDFQKYVMELQKSRPNLILCGDYNICHEPIDIHDPVRNATNSGFLPEER 175 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + + + G+ D+ R Y++W Y +S +KNKG RID+ M+S LL A Sbjct: 176 EWMTRFLSAGYVDSFRTLCPEKQEYTWWSYRFNSRAKNKGWRIDYCMVSEPVRPLLKRAY 235 Query: 241 IDTKPRGWTKPSDHTPVIVSL 261 I + SDH P+ + + Sbjct: 236 ILNEA----VHSDHCPMALEI 252 >gi|160884274|ref|ZP_02065277.1| hypothetical protein BACOVA_02252 [Bacteroides ovatus ATCC 8483] gi|156110013|gb|EDO11758.1| hypothetical protein BACOVA_02252 [Bacteroides ovatus ATCC 8483] Length = 253 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 81/261 (31%), Positives = 137/261 (52%), Gaps = 12/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60 + + T+NVN +RA + L W+ + NPDI+CLQETK + +P E ++L Y ++ + Sbjct: 1 MKIITYNVNGLRAAVSKGLPEWLAQENPDILCLQETKLQPDQYPGEVFEALGYKSYLYSA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GVAIL+K +P + + + D + RFI A F L + ++Y P G Sbjct: 61 QKKGYSGVAILTKQEPDHVEYGMGMEAYDNEGRFIRADFG----DLSVVSVYHPSG-TSG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K++W++ F ++ + + LI GDYNI +P D ++P+ ++ F E R Sbjct: 116 DERQAFKMAWLEDFQKYVMELQKSRPNLILCGDYNICHEPIDIHDPVRNATNSGFLPEER 175 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + + + G+ D+ R Y++W Y +S +KNKG RID+ M+S LL A Sbjct: 176 EWMTRFLSAGYVDSFRTLCPEKQEYTWWSYRFNSRAKNKGWRIDYCMVSEPVRPLLKRAY 235 Query: 241 IDTKPRGWTKPSDHTPVIVSL 261 I + SDH P+ + + Sbjct: 236 ILNEA----VHSDHCPMALEI 252 >gi|294102589|ref|YP_003554447.1| exodeoxyribonuclease III [Aminobacterium colombiense DSM 12261] gi|293617569|gb|ADE57723.1| exodeoxyribonuclease III [Aminobacterium colombiense DSM 12261] Length = 261 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 86/264 (32%), Positives = 138/264 (52%), Gaps = 4/264 (1%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 ++ +AT+NVNS+R+R+H L+ W+ +N D++CLQETKTED+ FP ++L Y G+ Sbjct: 1 MLKIATFNVNSVRSRMHILSQWLHDNRVDVLCLQETKTEDQFFPASEFEALGYEAVFKGE 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K+YNGVA+LS + I+ G + + + I N Y+P G I + Sbjct: 61 KAYNGVALLSLHP---IMNPHFGLEDGEEPDPATRIVRGTVLGVHIINTYVPQGKSIDHS 117 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 Y K+ + R + + L++ GD N+ P D NP + CF ++++ Sbjct: 118 DYQYKMRFFDRLKTLFDREYSKADDLLWVGDMNVAPTDIDVTNPGNKRDHVCFHEDIKKK 177 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYY-ADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F++++ GF D R +SF+DY ++ +N G RIDHI+ + + Sbjct: 178 FEEIKAWGFIDVFRKYRPGEGEFSFFDYRVKNALERNIGWRIDHILATSSLAHRSEDCYV 237 Query: 242 DTKPRGWTKPSDHTPVIVSLDIPE 265 D PRGW KPSDH PV+ + +I E Sbjct: 238 DRGPRGWEKPSDHAPVVGAFNIDE 261 >gi|325922607|ref|ZP_08184358.1| Exodeoxyribonuclease III [Xanthomonas gardneri ATCC 19865] gi|325546902|gb|EGD18005.1| Exodeoxyribonuclease III [Xanthomonas gardneri ATCC 19865] Length = 259 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 90/264 (34%), Positives = 139/264 (52%), Gaps = 7/264 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A+WNVNS+ R+ +L W+ PD++ +QETK ED FP L + Y CGQK Sbjct: 1 MKIASWNVNSLNVRLPHLQQWLGTFAPDVVGIQETKLEDHKFPDAALAAAGYRSVFCGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAILS+ +++ +PG D Q +RI NLY+ +G + + K Sbjct: 61 TYNGVAILSRSPALDVQMGIPGFDDVQQRVIAATVDG-----VRIVNLYVVNGQDVDTDK 115 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP-IIWENDACFTLEVRQS 182 Y K+ W+ + +Q L+ L+ GD+NI P D ++P + E+ + R + Sbjct: 116 YAYKLRWLAAVHEWLAQELQKYPQLMVLGDFNIAPDARDVHDPSVWNEHHILTSTAERAA 175 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 +KL +G DA R HD +S+WDY + +N G+RID ++S + + ID Sbjct: 176 LEKLLALGLHDAFRLHHDDAEQFSWWDYRQAGFRRNLGLRIDLTLVSDALRARAVESGID 235 Query: 243 TKPRGWTKPSDHTPVIVSL-DIPE 265 +PR W +PSDH P V L D+ Sbjct: 236 REPRTWERPSDHAPAWVRLADLDA 259 >gi|294666217|ref|ZP_06731470.1| exodeoxyribonuclease III [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292603990|gb|EFF47388.1| exodeoxyribonuclease III [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 259 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 87/259 (33%), Positives = 136/259 (52%), Gaps = 6/259 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A+WNVNS+ R+ +L W+ PD++ +QETK ED FP L +L Y CGQK Sbjct: 1 MKIASWNVNSLNVRLPHLQQWLAAFAPDVVGIQETKLEDHKFPDAALAALGYRSVFCGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAILS+ +++ +PG D Q +RI NLY+ +G + + K Sbjct: 61 TYNGVAILSRSPAVDVQMGIPGLDDVQQRVIAATVDG-----VRIINLYVVNGQDVGTDK 115 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN-PIIWENDACFTLEVRQS 182 Y K+ W+ + +Q L+ L+ GD+NI P D ++ + E+ + + R + Sbjct: 116 YAYKLRWLAAAHDWIAQELQRYPQLVVLGDFNIAPDARDVHDATVWNEHHILTSTDERAA 175 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 KL +G DA R + +S+WDY + +N G+RID ++S + + ID Sbjct: 176 LDKLLALGLHDAFRLHNQDAEHFSWWDYRQAGFRRNLGLRIDLTLVSDTLRARAVESGID 235 Query: 243 TKPRGWTKPSDHTPVIVSL 261 +PR W +PSDH P V L Sbjct: 236 REPRTWERPSDHAPAWVRL 254 >gi|325927981|ref|ZP_08189202.1| Exodeoxyribonuclease III [Xanthomonas perforans 91-118] gi|325541666|gb|EGD13187.1| Exodeoxyribonuclease III [Xanthomonas perforans 91-118] Length = 259 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 87/259 (33%), Positives = 136/259 (52%), Gaps = 6/259 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A+WNVNS+ R+ +L W+ PD++ +QETK ED FP L +L Y CGQK Sbjct: 1 MKIASWNVNSLNVRLPHLQQWLAAFAPDVVGIQETKLEDHKFPDAALAALGYRSVFCGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAILS+ +++ +PG D Q +RI NLY+ +G + + K Sbjct: 61 TYNGVAILSRSPAVDVQMGIPGLDDVQQRVIAATVDG-----VRIINLYVVNGQDVGTDK 115 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN-PIIWENDACFTLEVRQS 182 Y K+ W+ + +Q L+ L+ GD+NI P D ++ + E+ + + R + Sbjct: 116 YAYKLRWLAAAHDWIAQELQRYPQLVVLGDFNIAPDARDVHDATVWNEHHILTSTDERAA 175 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 KL +G DA R + +S+WDY + +N G+RID ++S + + ID Sbjct: 176 LDKLLALGLHDAFRLHNQDAEHFSWWDYRQAGFRRNLGLRIDLTLVSDALRTRAVESGID 235 Query: 243 TKPRGWTKPSDHTPVIVSL 261 +PR W +PSDH P V L Sbjct: 236 REPRTWERPSDHAPAWVRL 254 >gi|21244888|ref|NP_644470.1| exodeoxyribonuclease III [Xanthomonas axonopodis pv. citri str. 306] gi|21110598|gb|AAM39006.1| exodeoxyribonuclease III [Xanthomonas axonopodis pv. citri str. 306] Length = 259 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 88/259 (33%), Positives = 136/259 (52%), Gaps = 6/259 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A+WNVNS+ R+ +L W+ PD++ +QETK ED FP L +L Y CGQK Sbjct: 1 MKIASWNVNSLNVRLPHLQQWLAAFAPDVVGIQETKLEDHKFPDAALAALGYRSVFCGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAILS+ I++ +PG D Q +RI NLY+ +G + + K Sbjct: 61 TYNGVAILSRSPAIDVQMGIPGLDDVQQRVIAATVDG-----VRIINLYVVNGQDVGTDK 115 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN-PIIWENDACFTLEVRQS 182 Y K+ W+ + +Q L+ L+ GD+NI P D ++ + E+ + + R + Sbjct: 116 YAYKLRWLAAAHDWIAQELQRYPQLVVLGDFNIAPDARDVHDATVWNEHHILTSTDERAA 175 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 KL +G DA R + +S+WDY + +N G+RID ++S + + ID Sbjct: 176 LDKLLALGLHDAFRLHNQDADHFSWWDYRQAGFRRNLGLRIDLTLVSDALRTRAVESGID 235 Query: 243 TKPRGWTKPSDHTPVIVSL 261 +PR W +PSDH P V L Sbjct: 236 REPRTWERPSDHAPAWVRL 254 >gi|78049826|ref|YP_366001.1| exodeoxyribonuclease III [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78038256|emb|CAJ26001.1| exodeoxyribonuclease III [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 263 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 87/259 (33%), Positives = 136/259 (52%), Gaps = 6/259 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A+WNVNS+ R+ +L W+ PD++ +QETK ED FP L +L Y CGQK Sbjct: 5 MKIASWNVNSLNVRLPHLQQWLAAFAPDVVGIQETKLEDHKFPDAALAALGYRSVFCGQK 64 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAILS+ +++ +PG D Q +RI NLY+ +G + + K Sbjct: 65 TYNGVAILSRSPAVDVQMGIPGLDDVQQRVIAATVDG-----VRIINLYVVNGQDVGTDK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN-PIIWENDACFTLEVRQS 182 Y K+ W+ + +Q L+ L+ GD+NI P D ++ + E+ + + R + Sbjct: 120 YAYKLRWLAAAHDWIAQELQRYPQLVVLGDFNIAPDARDVHDATVWNEHHILTSTDERAA 179 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 KL +G DA R + +S+WDY + +N G+RID ++S + + ID Sbjct: 180 LDKLLALGLHDAFRLHNQDAEHFSWWDYRQAGFRRNLGLRIDLTLVSDALRTRAVESGID 239 Query: 243 TKPRGWTKPSDHTPVIVSL 261 +PR W +PSDH P V L Sbjct: 240 REPRTWERPSDHAPAWVRL 258 >gi|255009509|ref|ZP_05281635.1| exodeoxyribonuclease [Bacteroides fragilis 3_1_12] gi|313147282|ref|ZP_07809475.1| exodeoxyribonuclease [Bacteroides fragilis 3_1_12] gi|313136049|gb|EFR53409.1| exodeoxyribonuclease [Bacteroides fragilis 3_1_12] Length = 253 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 84/260 (32%), Positives = 138/260 (53%), Gaps = 12/260 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60 + + T+NVN +RA + L W+ E NPD++CLQETK + +P E ++L Y ++ + Sbjct: 1 MKIITYNVNGLRAAVNKGLPEWLAEENPDVLCLQETKLQPDQYPAEAFEALGYKAYLYSA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GVAIL+K +P I + ++ D + RFI A F L + ++Y P G Sbjct: 61 QKKGYSGVAILTKIEPDHIEYGMGIEEYDNEGRFIRADFG----DLSVVSVYHPSG-TSG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K+ W++ F ++ ++ + LI GDYNI +P D ++P+ ++ F E R Sbjct: 116 DERQAFKMVWLEAFQKYVTELRKSRPNLILCGDYNICHEPIDIHDPVRNATNSGFLPEER 175 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + + + GF D+ R + Y++W Y +S +KNKG RID+ M+S SLL A Sbjct: 176 EWMTRFLSAGFIDSFRTLYPEKQEYTWWSYRFNSRAKNKGWRIDYCMVSEPVRSLLKEAV 235 Query: 241 IDTKPRGWTKPSDHTPVIVS 260 I SDH P+ + Sbjct: 236 ILNNA----VHSDHCPMALE 251 >gi|89093141|ref|ZP_01166091.1| Exonuclease III [Oceanospirillum sp. MED92] gi|89082437|gb|EAR61659.1| Exonuclease III [Oceanospirillum sp. MED92] Length = 271 Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats. Identities = 80/271 (29%), Positives = 129/271 (47%), Gaps = 11/271 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + +NVN +R+R+H L A I + PD+I LQETK D+ FP ++++ YH+E GQK Sbjct: 1 MKLICFNVNGLRSRLHQLQAVIDKYQPDVIGLQETKVHDEAFPLTDVEAMGYHVEIHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-TQTLRIGNLYLPHGNPITST 122 + GV ++SK + D+ D Q R I + + T+R+ N Y P G + Sbjct: 61 GHYGVCLISKKPLTNVQKGYLTDEEDAQRRMIMGDYETDSGNTVRVMNGYFPQGESVDHE 120 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175 K+ K + + ++ ++ GD NI P+ + A F Sbjct: 121 VKFPAKRKFYADLQAHLEEHCSADQNIVVMGDLNISPEDKDIGIGEPNRKRWLKTGKASF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHL-YSFWDYYADSWSKN--KGIRIDHIMLSPEA 232 E R+ + KL G TD+ R + +S++DY + + +G+RID I+L+ Sbjct: 181 QPEEREWYAKLTGWGLTDSFRHLNPDEDQVFSWFDYRSRGFEAEPRRGLRIDGILLTAPL 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 A +D + RG KPSDH P+ LDI Sbjct: 241 LEKCADAGVDYELRGMEKPSDHAPIWTELDI 271 >gi|113460979|ref|YP_719046.1| exonuclease III [Haemophilus somnus 129PT] gi|112823022|gb|ABI25111.1| Exodeoxyribonuclease III [Haemophilus somnus 129PT] Length = 267 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 80/267 (29%), Positives = 123/267 (46%), Gaps = 8/267 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L +++ PD+I LQE K D++FP+ ++ L YHI GQK Sbjct: 1 MKFISFNINGLRARPHQLDRIVEKYQPDVIGLQEIKVSDEDFPYHLVEHLGYHIYHHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122 + GVA+L K +P I DD + Q R I A + L + N Y P G T Sbjct: 61 GHYGVALLLKQEPKVIRRGFSTDDENAQKRIIMADLETDFGLLTVINGYFPQGENRQHET 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + + Q + P++ GD NI P + + F Sbjct: 121 KFPAKEKFYADLQHYVEQEHDRNNPILIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +L N G D R + T + +S++DY + + N+G+RIDHI+++ Sbjct: 181 PEEREWINRLYNYGLIDTFRHKNPTINDQFSWFDYRSKGFDDNRGLRIDHILVNQLLLER 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262 A I R KPSDH P+ Sbjct: 241 CVDAGIAFDIRAMEKPSDHAPIWAEFK 267 >gi|52307155|gb|AAU37655.1| XthA protein [Mannheimia succiniciproducens MBEL55E] Length = 275 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 82/269 (30%), Positives = 123/269 (45%), Gaps = 8/269 (2%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + + ++N+N +RAR H L +++ PDII LQE K D+ FP E + L YH+ G Sbjct: 7 NNMKIISFNINGLRARPHQLDKIVEQYQPDIIGLQEIKVADEMFPHELVDHLGYHVYHHG 66 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 QK + GVA+L K P + D D Q R I A F L + N Y P G Sbjct: 67 QKGHYGVALLCKQAPKAVHKGFSTDTEDAQKRLIMADFETAFGALTVVNGYFPQGESRDH 126 Query: 122 -TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDAC 174 TK+ K + L + E +I GD NI P D + Sbjct: 127 ETKFPAKEKFYADLLNYVKNEHNPESNIIIMGDMNISPTDLDIGIGEDSRKRWLRTGKCS 186 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 F E R+ +Q+L G D R + T+ +S++DY + +++N+G+RIDHI+ + + Sbjct: 187 FLPEEREWYQRLYECGLEDTFRKLNPWTNDKFSWFDYRSKGFAENRGLRIDHILANSKLA 246 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 I R KPSDH P+ + Sbjct: 247 ERCVDTGIALDIRAMEKPSDHAPIWATFK 275 >gi|5545327|dbj|BAA82542.1| DNase [Actinobacillus actinomycetemcomitans] Length = 278 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 79/267 (29%), Positives = 122/267 (45%), Gaps = 8/267 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +RAR H L I + PD++ LQE K D+ FP++ + L YH+ GQK Sbjct: 12 MKIMSFNINGLRARPHQLEEIINKYQPDVLGLQEIKVADEVFPYDLVDHLGYHVNHFGQK 71 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122 + GVA+LSK P+ + P DD + Q R I L + N Y P G Sbjct: 72 GHYGVALLSKQAPLSVRKGFPTDDEEAQKRIIMIDLETKFGQLTVINGYFPQGESREHPT 131 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP------QPHDCYNPIIWENDACFT 176 K+ K + R+ Q + P+I GD NI P + + F Sbjct: 132 KFPAKQKFYADLQRYLEQDHNAQNPVIIMGDMNISPSNLDIGIGEENRKRWLRTGKCSFL 191 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +Q+L G D R + T + +S++DY + + N+G+RIDHI+ + + Sbjct: 192 PEEREWYQRLYAYGLEDTFRHMNPTVNDKFSWFDYRSKGFDDNRGLRIDHILANKALVAH 251 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262 I R KPSDH P+ Sbjct: 252 CVDTGIALDIRAMNKPSDHAPIWAEFK 278 >gi|237737412|ref|ZP_04567893.1| exodeoxyribonuclease III [Fusobacterium mortiferum ATCC 9817] gi|229421274|gb|EEO36321.1| exodeoxyribonuclease III [Fusobacterium mortiferum ATCC 9817] Length = 251 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 70/262 (26%), Positives = 117/262 (44%), Gaps = 13/262 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + KE DI CLQETK ++ E L + + + Sbjct: 1 MKLISWNVNGLRACVGKGFLDYFKEQQADIFCLQETKLQEGQIELE-LDGYHQYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +PI + + ++ D + R I F + Sbjct: 60 KGYSGTAIFTKEKPISVHYGIGIEEHDKEGRVITLEFEKFYMITVYTPNSQEKLARLDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + L+ ++P+I GD N+ + D NP +A F+ E R+ Sbjct: 120 M------KWEEDFKNYLLELDKKKPVIVCGDLNVAHKEIDLKNPKTNRKNAGFSDEEREK 173 Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 KL GF D+ R + +YS+W Y + +KN G RID+ ++S + A I Sbjct: 174 MTKLLESGFVDSFRYFYPNKTDIYSWWSYRFSARAKNAGWRIDYFLVSDRIKENMKGAEI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 T+ G SDH PV++++D+ Sbjct: 234 HTEILG----SDHCPVLLNIDL 251 >gi|305666072|ref|YP_003862359.1| exodeoxyribonuclease [Maribacter sp. HTCC2170] gi|88707506|gb|EAQ99749.1| exodeoxyribonuclease [Maribacter sp. HTCC2170] Length = 253 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 79/262 (30%), Positives = 127/262 (48%), Gaps = 14/262 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY---HIET 59 + + ++NVN IRA I W+K +PD+ICLQE K + + Y + + Sbjct: 1 MKIVSYNVNGIRAAINKGFLDWLKATDPDVICLQEIKAMKEQLDLSLFEEAGYANNYWYS 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GVAILSK QP + D +D + R + A F + I +LYLP G Sbjct: 61 AQKKGYSGVAILSKKQPDHVEYGTGIDYMDFEGRNLRADFDG----VSIMSLYLPSG--T 114 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + + K+ ++ F R+ + LI GDYNI + D ++P+ + + F Sbjct: 115 NMDRLEFKLKYMAEFQRYVDDLRKAHPNLIILGDYNICHEAIDIHDPVRNKKVSGFLPVE 174 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R+ GF D+ R + H Y++W Y A++ + NKG R+D+ M+S + L + Sbjct: 175 REWIGSFIESGFIDSFRHLNKEPHNYTWWSYRANARNNNKGWRLDYGMVSEPLENRLKRS 234 Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261 I + R SDH P++V L Sbjct: 235 VILSDAR----HSDHCPILVEL 252 >gi|91792822|ref|YP_562473.1| exonuclease III [Shewanella denitrificans OS217] gi|91714824|gb|ABE54750.1| Exodeoxyribonuclease III [Shewanella denitrificans OS217] Length = 269 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 85/269 (31%), Positives = 133/269 (49%), Gaps = 9/269 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +RAR+H L A I + PDII LQETK D+ FP ++++ Y + G K Sbjct: 1 MKIISFNINGLRARLHQLQALIDSHQPDIIGLQETKVHDEAFPVADVEAMGYKVHYHGGK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLD-VQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121 ++ GVA+LSK +PIE+ D+ D + I N + L + N Y P G+ I Sbjct: 61 AHYGVAMLSKLEPIEVQKGFSTDEEDAQRRLIIGKFNQANGRVLTVINGYFPQGDSIHHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175 TKY K + + + +E + GD NI PQ D + F Sbjct: 121 TKYPAKRKFYQDLMAHLDANHSPDEDIAIIGDINISPQDLDIGIGEVNAKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R+ L + GF D+ R H YS++DY + + N+G+RID I+++ T+ Sbjct: 181 QPEEREWLACLLDWGFIDSFRLLHPTREQRYSWFDYRSKGFDDNRGLRIDVILITASMTA 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 L + +D RG KPSDH P+ + + Sbjct: 241 NLVESDVDYDLRGIEKPSDHAPIWSTFSV 269 >gi|86135128|ref|ZP_01053710.1| exodeoxyribonuclease III (Xth) [Polaribacter sp. MED152] gi|85821991|gb|EAQ43138.1| exodeoxyribonuclease III (Xth) [Polaribacter sp. MED152] Length = 253 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 78/264 (29%), Positives = 124/264 (46%), Gaps = 15/264 (5%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY---HIET 59 + + ++NVN IRA + + W+K NPD+IC+QETK + + Y + + Sbjct: 1 MKIISYNVNGIRAALKKGFSDWLKAANPDVICIQETKAHKEQLDLSLFEDAGYPYHYWFS 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+ VAIL K +P I + +D + R + F + I +LYLP G Sbjct: 61 AQKKGYSSVAILCKEKPNHIEYGTGIESMDFEGRNLRVDFD----DVSIMSLYLPSGTNA 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 D K +++ F + + + L+ GDYNI + D +NP + + F E Sbjct: 117 LR--LDYKFNYMDEFQEYITNLRKEIPNLVICGDYNICHEEIDIHNPK-MKGVSGFLPEE 173 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R N GF D+ R + YS+W Y A++ + NKG R+D+ M+S + A Sbjct: 174 RTWIGNFINSGFIDSFRYLNKELQQYSWWSYRANARANNKGWRLDYAMVSEPLKDKISRA 233 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 I + K SDH P+ + LDI Sbjct: 234 YILPEA----KHSDHCPIALELDI 253 >gi|225012120|ref|ZP_03702557.1| exodeoxyribonuclease III Xth [Flavobacteria bacterium MS024-2A] gi|225003675|gb|EEG41648.1| exodeoxyribonuclease III Xth [Flavobacteria bacterium MS024-2A] Length = 257 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 81/262 (30%), Positives = 127/262 (48%), Gaps = 13/262 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC-- 60 + + ++NVN IRA + A+W+ D+IC+QE K ++ L++L YH Sbjct: 5 LKILSYNVNGIRAALNKGFASWLDSTAADVICIQEIKALEEQVDTAALEALGYHHFWFSA 64 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GVAI SK +P + + +D + R I A F + I +LYLP G I Sbjct: 65 QKKGYSGVAIFSKIKPTNVTFGCGIEHMDFEGRIIRADFD----KVSIMSLYLPSGTNID 120 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K ++ F + + LI GDYNI D ++P+ +N + F E R Sbjct: 121 R--LEYKFKFMAEFQEYIDLLKKEFPNLIICGDYNICHHAIDIHDPVRNKNVSGFLPEER 178 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + GF D+ R + H YS+W Y A++ + NKG RID+ ++S ++ A Sbjct: 179 KWLDGFITSGFIDSFRYLNPEPHHYSWWSYRANARNNNKGWRIDYALVSESLKDNINRAY 238 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I + K SDH PV V L+ Sbjct: 239 ILPEA----KHSDHCPVGVELN 256 >gi|152987919|ref|YP_001346307.1| exodeoxyribonuclease III [Pseudomonas aeruginosa PA7] gi|150963077|gb|ABR85102.1| exodeoxyribonuclease III [Pseudomonas aeruginosa PA7] Length = 261 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 102/262 (38%), Positives = 153/262 (58%), Gaps = 5/262 (1%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 M + +AT+NVN I+ R+ L AW++ PDI+CLQE KT D FP L+ Y Sbjct: 1 MGTLKIATFNVNGIQTRLAALLAWLEREAPDIVCLQELKTPDARFPAAALEKAGYGAIWQ 60 Query: 61 GQKSYNGVAILSKY-QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 GQ ++NGVAIL++ QP+E+ LPG+ D +R++EA L + +LYLP+GNP Sbjct: 61 GQSAWNGVAILARDSQPLEVRRGLPGNASDPHSRYLEAAVDG----LLVASLYLPNGNPQ 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K+D K++W + +R A++ ++ P++ AGD+N++P D Y+ W+ DA E Sbjct: 117 PGPKFDYKLAWFEHLIRHAAELMKSGHPVVLAGDFNVVPSNFDIYDTRSWKKDALLQPES 176 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R+ F++L G+ DA+R LY+FWDY+ W ++ G+RIDH++LS L A Sbjct: 177 RECFERLLRQGWVDALRQRFPDRRLYTFWDYFRQHWQRDAGLRIDHLLLSASLADHLEDA 236 Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261 +D RG SDH P VSL Sbjct: 237 GVDRWVRGEEHASDHAPAWVSL 258 >gi|73670688|ref|YP_306703.1| DNA-(apurinic or apyrimidinic site) lyase [Methanosarcina barkeri str. Fusaro] gi|72397850|gb|AAZ72123.1| DNA-(apurinic or apyrimidinic site) lyase [Methanosarcina barkeri str. Fusaro] Length = 258 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 70/260 (26%), Positives = 119/260 (45%), Gaps = 12/260 (4%) Query: 6 VATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETCGQ 62 + +WNVN +RA + + E DI+C+QETK P E Y+ + + Sbjct: 7 LISWNVNGLRAVMKKGFLELLLEQKFDIVCIQETKVSPDKLPREAKNIPGYYNYFVSAEK 66 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 Y+GV + SK +P+++ T + + D + RF+ A F + N+Y P+G + Sbjct: 67 NGYSGVGLFSKKKPLKLETGMGIEKFDKEGRFLRADFE----DFTLMNIYFPNGK-ASLE 121 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + K+S+ + FL +A+ + L+ GD N + D P E + F E R Sbjct: 122 RLEYKMSFYEAFLDYANSLKAEGKRLVICGDVNTAHKELDLARPKQNETISGFLPEERAW 181 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 K G+ D R + YS+W + +N G R+D+ +S + + SA I Sbjct: 182 MDKFLAAGYLDTFRMFNPEGGNYSWWSMRTGARKRNVGWRLDYFFVSEKLRDNVKSAPIY 241 Query: 243 TKPRGWTKPSDHTPVIVSLD 262 ++ G SDH PV + L+ Sbjct: 242 SEIMG----SDHCPVGLELE 257 >gi|309782573|ref|ZP_07677296.1| exodeoxyribonuclease III [Ralstonia sp. 5_7_47FAA] gi|308918664|gb|EFP64338.1| exodeoxyribonuclease III [Ralstonia sp. 5_7_47FAA] Length = 269 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 95/266 (35%), Positives = 145/266 (54%), Gaps = 8/266 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPD-----IICLQETKTEDKNFPFETLQSLNYHIE 58 + VATWNVNS++ R+ ++ W+ E D ++CLQE K D +P L + Y Sbjct: 1 MRVATWNVNSLKVRLPHVLQWLAEREADATPIDLLCLQELKLPDDRYPLAELDAAGYASL 60 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDL---DVQARFIEATFTINTQTLRIGNLYLPH 115 GQK+YNGVAILS+ + + + D Q R + AT+ ++ +R+ + Y+P+ Sbjct: 61 FTGQKTYNGVAILSRKASVPEGRDVVKNIPGFTDDQQRIVAATYDVDGGPVRVISAYIPN 120 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 G + S K+ K+ W++ + + + L+ GD+NI P+ D ++P WE Sbjct: 121 GQALDSDKFVYKLRWLEALQAWLASEMAANPRLMLLGDFNIAPEDRDVHDPKKWEGQNLV 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 + E R +F+ +Q G DA R L+S+WDY + +N G+RIDHIMLSPE L Sbjct: 181 SPEERAAFRAMQAAGLVDAFRMFEQEDKLFSWWDYRMFGFKRNAGLRIDHIMLSPELAKL 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 S ID PR W +PSDHTPV+ +L Sbjct: 241 CESCHIDRVPRTWEQPSDHTPVVAAL 266 >gi|182626631|ref|ZP_02954375.1| exodeoxyribonuclease III [Clostridium perfringens D str. JGS1721] gi|177908025|gb|EDT70604.1| exodeoxyribonuclease III [Clostridium perfringens D str. JGS1721] Length = 250 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 66/256 (25%), Positives = 108/256 (42%), Gaps = 13/256 (5%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + K + DI CLQETK ++ + L+ + + + Sbjct: 1 MKLISWNVNGLRACVKKGFLDYFKSEDADIFCLQETKLQEGQIDLD-LEGYHQYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +P+ + + + D + R I F + Sbjct: 60 KGYSGTAIFTKKEPLNVYYGINMEHHDKEGRVITLEFEDFFMVTVYTPNSQSELARLEYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + R L ++ ++ GD N+ + D NP +A FT E R Sbjct: 120 M------EWEDDFRNYLLELSSKKGVVVCGDLNVAHKEIDLKNPKTNRKNAGFTDEERDK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F L + GF D R + +YS+W Y ++ N G RID+ ++S + A I Sbjct: 174 FSTLLSSGFIDTFRYFNPDLEGVYSWWSYRFNARKNNAGWRIDYFLVSNNLEDRIKEASI 233 Query: 242 DTKPRGWTKPSDHTPV 257 DT+ G SDH PV Sbjct: 234 DTEILG----SDHCPV 245 >gi|207742979|ref|YP_002259371.1| exodeoxyribonuclease III protein [Ralstonia solanacearum IPO1609] gi|206594376|emb|CAQ61303.1| exodeoxyribonuclease III protein [Ralstonia solanacearum IPO1609] Length = 269 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 92/266 (34%), Positives = 141/266 (53%), Gaps = 8/266 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPD-----IICLQETKTEDKNFPFETLQSLNYHIE 58 + VATWNVNS++ R+ ++ W+ E D ++CLQE K D +P L + Y Sbjct: 1 MRVATWNVNSLKVRLPHVLQWLGEREADATPIDLLCLQELKLPDDRYPLAELDAAGYASL 60 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDV---QARFIEATFTINTQTLRIGNLYLPH 115 GQK+YNGVAIL++ + + + Q R + AT+ + +R+ + Y P+ Sbjct: 61 FTGQKTYNGVAILARKAAMPEGRDVIKNIPGFADEQQRIVAATYDVAGGPVRVISAYFPN 120 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 G + S K K+ W+ + ++ L+ GD+NI P D ++P WE Sbjct: 121 GQALDSDKMVYKMRWLAALQDWLKTEMDAHPRLMLLGDFNIAPDDRDVHDPKKWEGMNLV 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 + E R +F+ L++ G DA R L+S+WDY ++ +N G+RIDHI+LSPE Sbjct: 181 SPEERAAFRALESAGLVDAFRMFEQADKLFSWWDYRLFAFKRNAGLRIDHILLSPELAQR 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 S ID PRGW +PSDHTPV+ +L Sbjct: 241 CESCHIDRVPRGWEQPSDHTPVVAAL 266 >gi|294806497|ref|ZP_06765338.1| exodeoxyribonuclease III [Bacteroides xylanisolvens SD CC 1b] gi|294446360|gb|EFG14986.1| exodeoxyribonuclease III [Bacteroides xylanisolvens SD CC 1b] Length = 253 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 81/261 (31%), Positives = 136/261 (52%), Gaps = 12/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60 + + T+NVN +RA + L W+ + NPDI+CLQETK + +P E ++L Y ++ + Sbjct: 1 MKIITYNVNGLRAAVSKGLPEWLAQENPDILCLQETKLQPDQYPGEVFEALGYKSYLYSA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GVAIL+K +P + + + D + RFI A F L + ++Y P G Sbjct: 61 QKKGYSGVAILTKREPDHVEYGMGMEAYDNEGRFIRADFG----DLSVVSVYHPSG-TSG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K+ W++ F ++ + + LI GDYNI +P D ++P+ ++ F E R Sbjct: 116 DERQAFKMVWLEDFQKYVMELQKSRPNLILCGDYNICHEPIDIHDPVRNATNSGFLPEER 175 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + + + G+ D+ R Y++W Y +S +KNKG RID+ M+S LL A Sbjct: 176 EWMTRFLSAGYVDSFRTLCPEKQEYTWWSYRFNSRAKNKGWRIDYCMVSEPVRPLLKRAY 235 Query: 241 IDTKPRGWTKPSDHTPVIVSL 261 I + SDH P+ + + Sbjct: 236 ILNEA----VHSDHCPMALEI 252 >gi|289435119|ref|YP_003464991.1| exodeoxyribonuclease III [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289171363|emb|CBH27905.1| exodeoxyribonuclease III [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 251 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 65/262 (24%), Positives = 111/262 (42%), Gaps = 13/262 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + + DI CLQETK + + L + + + Sbjct: 1 MKLISWNVNGLRAAVKKGFLEYFDSVDADIFCLQETKLQAGQIDLD-LPAYKDYWNYAVK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +P+ + L ++ D + R I F + Sbjct: 60 KGYSGTAIFTKKEPLSVQYGLGIEEHDTEGRVITLEFEKFFMVTVYTPNSQAELKRLDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + ++L+ +P++ GD N+ + D NP +A F+ E R Sbjct: 120 M------TFEDAILAYVKKLDETKPVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F GF D+ R + YS+W Y ++ ++N G RID+ ++S L A+I Sbjct: 174 FTAFLEAGFVDSFRYFYPDLEDAYSWWSYRMNARARNIGWRIDYFVVSERLKDNLVDAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 G SDH PV + L+I Sbjct: 234 HPDVLG----SDHCPVELELNI 251 >gi|227834100|ref|YP_002835807.1| exodeoxyribonuclease III [Corynebacterium aurimucosum ATCC 700975] gi|262183414|ref|ZP_06042835.1| exodeoxyribonuclease III [Corynebacterium aurimucosum ATCC 700975] gi|227455116|gb|ACP33869.1| exodeoxyribonuclease III [Corynebacterium aurimucosum ATCC 700975] Length = 269 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 83/267 (31%), Positives = 136/267 (50%), Gaps = 8/267 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+NS+R R + +++ D++CLQETK D FP E + + YH+ G Sbjct: 1 MRIATWNINSVRTRAQRAVDLLAKHDIDVLCLQETKVADAKFPREPFEEVGYHVTCHGLN 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT-----INTQTLRIGNLYLPHGNP 118 +NGVAILSK +P E+ T PG + E + + I +LY+P+G Sbjct: 61 QWNGVAILSKEEPEEVQTFFPGQPGFHKDPAKEQAREARAVSARVRGIEIWSLYVPNGRE 120 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 IT +D K+ ++ R+A R + + L+ GD+NI P D ++ + T Sbjct: 121 ITDRHFDYKLDFLYSLARYAENRTQSK--LLLTGDFNIAPWDEDVWDMSPFRGKTHVTEP 178 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R +FQ L+ G + R + ++++DY + + KN+G+RID + S L+ Sbjct: 179 ERAAFQMLEEAGLVEVTRRFTE-EDRWTYFDYKSLRFQKNEGMRIDFQLASEPLARLVEG 237 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIPE 265 A++D R K SDH P+I D+P+ Sbjct: 238 AQVDMVERAGDKTSDHVPLIADFDVPD 264 >gi|77458095|ref|YP_347600.1| exodeoxyribonuclease III [Pseudomonas fluorescens Pf0-1] gi|77382098|gb|ABA73611.1| putative exodeoxyribonuclease [Pseudomonas fluorescens Pf0-1] Length = 264 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 105/262 (40%), Positives = 155/262 (59%), Gaps = 5/262 (1%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 M + +AT+NVN +RAR+ NL W++ PDI+CLQE K D FP L++ Y Sbjct: 1 MKKMRIATFNVNGLRARLPNLLEWLRREQPDIVCLQELKMLDSAFPAADLEAAGYGAIWH 60 Query: 61 GQKSYNGVAILSKY-QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 GQ S+NGVAIL++ QP+E LPGD D +R++EA + +G LYLP+GNP Sbjct: 61 GQASWNGVAILARDAQPLESRRGLPGDPDDKHSRYLEAAV----HGVLVGCLYLPNGNPQ 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K+D K++W +R +++A + P++ AGDYN++P D YN W DA E Sbjct: 117 PGPKFDYKLAWFERLIKYARDLQSSDHPVVLAGDYNVVPTDLDIYNTRSWLKDALLQPES 176 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R+ +Q+L + G+TD++R + LY+FWDY+ W KN G+RIDH++L+P + LH A Sbjct: 177 RECYQRLLDQGWTDSLRHLYPEDRLYTFWDYFRQHWQKNSGLRIDHLLLNPTLSPYLHEA 236 Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261 +D R SDH P + + Sbjct: 237 GVDAWVRNEPHASDHAPTWIRI 258 >gi|319899105|ref|YP_004159198.1| exodeoxyribonuclease III [Bartonella clarridgeiae 73] gi|319403069|emb|CBI76624.1| exodeoxyribonuclease III [Bartonella clarridgeiae 73] Length = 260 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 141/259 (54%), Positives = 180/259 (69%), Gaps = 1/259 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+ I+AR L W+K+N PDI+CLQE K+ D+NFP +T++SL YHIET GQK Sbjct: 1 MKIATWNIAGIKARHETLCKWLKQNQPDIVCLQEIKSVDENFPRDTIESLGYHIETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 S+NGVAILSK P EI+ LPGD+ D QAR+IE ++ N ++R+ +LYLP+GNPI S K Sbjct: 61 SFNGVAILSKKVPDEIIRRLPGDNNDKQARYIETVYSTNKGSIRVASLYLPNGNPINSEK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W+KRF A L EEPLI AGDYN+IP P D NP W NDA F ++RQ F Sbjct: 121 YLYKMEWMKRFYTHAKSLLAYEEPLILAGDYNVIPTPLDAKNPQEWSNDALFLPQIRQIF 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q + ++GF DAIR DT +SFWD+ A +W KN GIRIDH++LSPEA L A T Sbjct: 181 QCIVHLGFYDAIRCVTDTP-SFSFWDFQAGAWKKNNGIRIDHLLLSPEAADQLICAYSQT 239 Query: 244 KPRGWTKPSDHTPVIVSLD 262 + RG KPSDH P+ V L+ Sbjct: 240 EMRGHQKPSDHIPIWVQLN 258 >gi|302534940|ref|ZP_07287282.1| exodeoxyribonuclease III [Streptomyces sp. C] gi|302443835|gb|EFL15651.1| exodeoxyribonuclease III [Streptomyces sp. C] Length = 267 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 62/266 (23%), Positives = 103/266 (38%), Gaps = 6/266 (2%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IET 59 ++TV + NVN IRA W+ ++ D++CLQE + E+ P E + +H Sbjct: 1 MLTVTSVNVNGIRAAAKKGFVEWLAGSDADVVCLQEVRAEEAQIPAEAREPEGWHTVFAP 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 K GVA+ ++ +P + D+ D R+IE T + G Sbjct: 61 AAVKGRAGVALYTRREPERVRVGFGSDEFDASGRYIEVDLPGVTVA-SLYLPSGEAGTAK 119 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 KY ++ ++ ++ GD+NI Q D N +A F E Sbjct: 120 QDEKYRFMEEFLGYLGELKARAAADGREVVVCGDWNICHQEADLKNWKTNRKNAGFLPEE 179 Query: 180 RQS--FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 R+ + DT YS+W Y ++ + G RID + SP + Sbjct: 180 REWLGKVYAEAGYVDVVRGLHPDTEGPYSWWSYRGRAFDNDAGWRIDLQVASPGLAAKAV 239 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263 A ++ + SDH PV V ++ Sbjct: 240 KAFVERAETHPERWSDHAPVTVVYEL 265 >gi|225420139|ref|ZP_03762442.1| hypothetical protein CLOSTASPAR_06482 [Clostridium asparagiforme DSM 15981] gi|225041196|gb|EEG51442.1| hypothetical protein CLOSTASPAR_06482 [Clostridium asparagiforme DSM 15981] Length = 251 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 77/260 (29%), Positives = 121/260 (46%), Gaps = 13/260 (5%) Query: 5 TVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +WNVN +RA + + KE + D+ CLQETK ++ + L + + +K Sbjct: 3 KLISWNVNGLRACVGKGFLDYFKEADADVFCLQETKLQEGQIDLD-LPGYHQYWNYAQKK 61 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 Y+G A+ +K +P+ + L ++ D++ R I A F + + Sbjct: 62 GYSGTAMFTKEEPVSVRYGLGIEEHDMEGRVIAAEFQE-----YFVVTCYTPNSQDGLAR 116 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 D ++ W FL + + LE E+P+IF GD N+ + D NP +A FT E R F Sbjct: 117 LDYRMEWENAFLAYLKK-LEEEKPVIFCGDLNVAHKEIDLKNPKSNRKNAGFTDEERGKF 175 Query: 184 QKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 L GF D R + +YS+W Y + +KN G RID+ S L SA I Sbjct: 176 TDLLGAGFIDTFRYFYPDREGIYSWWSYRFSARAKNAGWRIDYFCASESLKDRLVSADIH 235 Query: 243 TKPRGWTKPSDHTPVIVSLD 262 T+ G SDH PV + ++ Sbjct: 236 TEVMG----SDHCPVELVIE 251 >gi|168205412|ref|ZP_02631417.1| exodeoxyribonuclease III [Clostridium perfringens E str. JGS1987] gi|170663003|gb|EDT15686.1| exodeoxyribonuclease III [Clostridium perfringens E str. JGS1987] Length = 250 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 66/256 (25%), Positives = 108/256 (42%), Gaps = 13/256 (5%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + K + DI CLQETK ++ + L+ + + + Sbjct: 1 MKLISWNVNGLRACVKKGFLDYFKSEDADIFCLQETKLQEGQIDLD-LEGYHQYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +P+ + + + D + R I F + Sbjct: 60 KGYSGTAIFTKKEPLNVYYGINMEHHDKEGRVITLEFEDFFMVTVYTPNSQSELARLEYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + R L ++ ++ GD N+ + D NP +A FT E R Sbjct: 120 M------EWEDDFRNYLLELSSKKGVVVCGDLNVAHKEIDLKNPKTNRKNAGFTDEERDK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F L + GF D R + +YS+W Y ++ N G RID+ ++S + A I Sbjct: 174 FSTLLSSGFIDTFRYFNPDLEGIYSWWSYRFNARKNNAGWRIDYFLVSNNLEDRIKEAFI 233 Query: 242 DTKPRGWTKPSDHTPV 257 DT+ G SDH PV Sbjct: 234 DTEILG----SDHCPV 245 >gi|18310156|ref|NP_562090.1| exodeoxyribonuclease III [Clostridium perfringens str. 13] gi|110802988|ref|YP_698514.1| exodeoxyribonuclease III [Clostridium perfringens SM101] gi|18144835|dbj|BAB80880.1| 3'-exo-deoxyribonuclease [Clostridium perfringens str. 13] gi|110683489|gb|ABG86859.1| exodeoxyribonuclease III [Clostridium perfringens SM101] Length = 250 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 66/256 (25%), Positives = 108/256 (42%), Gaps = 13/256 (5%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + K + DI CLQETK ++ + L+ + + + Sbjct: 1 MKLISWNVNGLRACVKKGFLDYFKSEDADIFCLQETKLQEGQIDLD-LEGYHQYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +P+ + + + D + R I F + Sbjct: 60 KGYSGTAIFTKKEPLNVYYGINMEHHDKEGRVITLEFEDFFMVTVYTPNSQSELARLEYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + R L ++ ++ GD N+ + D NP +A FT E R Sbjct: 120 M------EWEDDFRNYLLELSSKKGVVVCGDLNVAHKEIDLKNPKTNRKNAGFTDEERDK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F L + GF D R + +YS+W Y ++ N G RID+ ++S + A I Sbjct: 174 FSTLLSSGFIDTFRYFNPDLEGIYSWWSYRFNARKNNAGWRIDYFLVSNNLEDRIKEASI 233 Query: 242 DTKPRGWTKPSDHTPV 257 DT+ G SDH PV Sbjct: 234 DTEILG----SDHCPV 245 >gi|258543182|ref|YP_003188615.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-01] gi|256634260|dbj|BAI00236.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-01] gi|256637320|dbj|BAI03289.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-03] gi|256640372|dbj|BAI06334.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-07] gi|256643429|dbj|BAI09384.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-22] gi|256646484|dbj|BAI12432.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-26] gi|256649537|dbj|BAI15478.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-32] gi|256652523|dbj|BAI18457.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655581|dbj|BAI21508.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-12] Length = 261 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 97/259 (37%), Positives = 134/259 (51%), Gaps = 5/259 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++TWNVNS+R R+ + W+K PD++ +QE K E FP + Y GQK Sbjct: 1 MKLSTWNVNSVRQRLDLVLDWLKREQPDVLMMQEIKCETDQFPKAAFEDAGYGCAGVGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 SYNGVA L + LPG +NTQ + +GNLYLP+GN Sbjct: 61 SYNGVATLVRGDFSVTTDRLPGFSDPAARYV-----EVNTQGVVLGNLYLPNGNSGGEQG 115 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ ++ A L E AGDYNI P P DC + DA + R ++ Sbjct: 116 YATKLEFLSALTGRARLLLAEETDFALAGDYNICPAPIDCAPGALGPEDALVRPQSRAAY 175 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 ++L +G TDA+RA H T Y+FWDY A +W ++ G+RIDH++LSP L +A D Sbjct: 176 RRLLWLGLTDALRALHPTGAAYTFWDYQARAWERDCGLRIDHMLLSPRLAERLQTAEPDR 235 Query: 244 KPRGWTKPSDHTPVIVSLD 262 R +PSDH P IV+L Sbjct: 236 NERAMPRPSDHVPFIVTLK 254 >gi|225631175|ref|ZP_03787879.1| exodeoxyribonuclease III [Wolbachia endosymbiont of Muscidifurax uniraptor] gi|225591132|gb|EEH12310.1| exodeoxyribonuclease III [Wolbachia endosymbiont of Muscidifurax uniraptor] Length = 259 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 91/260 (35%), Positives = 149/260 (57%), Gaps = 1/260 (0%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 ++ +ATWNVNSIR R++ L ++I ++ DII LQE K ++ FP+ ++ L Y GQ Sbjct: 1 MLKIATWNVNSIRKRVNQLCSFIVDSQIDIILLQEIKCMEEQFPYAEIEKLGYECAVYGQ 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 + NGV +LSKY +E + + +AR+IE N Q +R+G++Y+P+G S Sbjct: 61 VARNGVCVLSKYPILEKFK-IDIVEGYQEARYIECIIKHNNQKVRVGSVYVPNGQSPDSQ 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 ++ K+ + S L+ EE I AGDYN+ P D ++ + CF + R+ Sbjct: 120 AFEYKLKFFDNLYERMSTLLKNEELTIIAGDYNVAPDEIDVFDSNLLNGQVCFHIREREK 179 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 + + N+GF DA R +H +++W Y +S N+G+RID+++LSP+A L + ID Sbjct: 180 LRAILNLGFKDAFRISHPNLQQFTWWHYQGNSLRNNQGMRIDYMLLSPQAVDKLETCYID 239 Query: 243 TKPRGWTKPSDHTPVIVSLD 262 + R PSDHTPV+ +++ Sbjct: 240 DRLRKLENPSDHTPVVCAIE 259 >gi|22299328|ref|NP_682575.1| exodeoxyribonuclease III [Thermosynechococcus elongatus BP-1] gi|22295511|dbj|BAC09337.1| exodeoxyribonuclease III [Thermosynechococcus elongatus BP-1] Length = 280 Score = 196 bits (498), Expect = 3e-48, Method: Composition-based stats. Identities = 83/260 (31%), Positives = 128/260 (49%), Gaps = 3/260 (1%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64 +ATWNVNSIR R+ ++ W+ D +CLQETK D FP + YH+ GQK+ Sbjct: 22 KIATWNVNSIRTRLDHVCQWLDSTGVDYLCLQETKVTDAEFPRQPFLDRGYHVYCSGQKA 81 Query: 65 YNGVAILSKYQPIEIVTHLPGDDLDVQ--ARFIEATFTINTQTLRIGNLYLPHGNPITST 122 YNGVAILS+ + + + N+Y+P+G S Sbjct: 82 YNGVAILSRQPLAGVEAGFAPQLPSHSELDTQKRLIRAQFAPDVILVNVYIPNGGEYDSE 141 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 KY K+ W+ + L ++L + +I GD+NI P+ D ++ T R Sbjct: 142 KYHYKLHWL-KTLYVYLEQLTTQGEVILCGDFNIAPEDKDLFDASDRATKVGATDAERNL 200 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 ++++GF DA R + YS+WDY + ++ +N G RIDH+ ++P + + ID Sbjct: 201 LAAIRDLGFHDAFRQFTEAPGHYSWWDYRSGAFRRNHGWRIDHLYVTPGVKARACNCHID 260 Query: 243 TKPRGWTKPSDHTPVIVSLD 262 PR KPSDH PVI+ ++ Sbjct: 261 IAPRRLPKPSDHAPVILEIE 280 >gi|72383653|ref|YP_293008.1| exodeoxyribonuclease III [Prochlorococcus marinus str. NATL2A] gi|72003503|gb|AAZ59305.1| Exodeoxyribonuclease III [Prochlorococcus marinus str. NATL2A] Length = 275 Score = 196 bits (497), Expect = 3e-48, Method: Composition-based stats. Identities = 97/272 (35%), Positives = 143/272 (52%), Gaps = 4/272 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + VATWNVNSIR+RI ++ W+ N DI+CLQETKTEDK FP E L Y + GQK Sbjct: 1 MLVATWNVNSIRSRIDHVKEWLITNKIDILCLQETKTEDKFFPIEIFSDLGYEVSISGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT----INTQTLRIGNLYLPHGNPI 119 SYNGVAI+S++ +I D Q I + + +RI N+Y+P+G+ I Sbjct: 61 SYNGVAIISRFPINDIKIGFNEVTNDYQDLSILSEQKRIISADINDIRIINVYVPNGSSI 120 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 S K+ K W+K + + + P+ GD+NI P+ D + P +E + + Sbjct: 121 NSDKFIYKKKWLKCLQVYLREINKNNTPICLLGDFNIAPEDRDIHTPSRYEESIMASSKE 180 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R+ + D R +S+WDY +W ++KG RIDHI L+ + S +S Sbjct: 181 RELLKDALGGELEDVFRIFEPGEKNWSWWDYRHSAWERDKGWRIDHIYLTEDILSCANSC 240 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271 ID + R KPSDH PV+V ++ P + + Sbjct: 241 WIDKEQRSREKPSDHAPVVVDINWPPSDIENE 272 >gi|291561139|emb|CBL39938.1| exodeoxyribonuclease III [butyrate-producing bacterium SS3/4] Length = 284 Score = 196 bits (497), Expect = 3e-48, Method: Composition-based stats. Identities = 76/263 (28%), Positives = 125/263 (47%), Gaps = 13/263 (4%) Query: 1 MSVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 +S+ + +WNVN +RA + ++KE++ DI C+QE+K ++ E L + + Sbjct: 32 LSMKKMISWNVNGLRACLGKGFLEYLKESDADIFCIQESKLQEGQVDLE-LPGYHQYWNY 90 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G A+ +K +PI + L ++ D + R I A F + Sbjct: 91 AEKKGYSGTAMFTKEEPIAVTYGLGIEEHDHEGRVITAEFPE-----YYVVTCYTPNSQD 145 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + D ++ W F + + LE ++P+IF GD N+ Q D NP +A F+ E Sbjct: 146 GLKRLDYRMQWEDAFRAYLKE-LETKKPVIFCGDLNVAHQEIDLKNPKTNRKNAGFSDEE 204 Query: 180 RQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R F +L GF D R + +YS+W Y + +KN G RID+ +S L Sbjct: 205 RAKFTELLEAGFVDTFRYFYPDQEGIYSWWSYRFSARAKNAGWRIDYFCVSESLKDRLVD 264 Query: 239 ARIDTKPRGWTKPSDHTPVIVSL 261 A+I T+ G SDH PV + + Sbjct: 265 AKIHTEVMG----SDHCPVELDI 283 >gi|319952714|ref|YP_004163981.1| exodeoxyribonuclease iii xth [Cellulophaga algicola DSM 14237] gi|319421374|gb|ADV48483.1| exodeoxyribonuclease III Xth [Cellulophaga algicola DSM 14237] Length = 253 Score = 196 bits (497), Expect = 4e-48, Method: Composition-based stats. Identities = 77/262 (29%), Positives = 128/262 (48%), Gaps = 14/262 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY---HIET 59 + + ++NVN IRA I W+K NPD++CLQE K ++ + Y + + Sbjct: 1 MKIVSYNVNGIRAAINKGFIDWLKIVNPDVVCLQEIKAMEEQLDLSLFEEAGYSYNYWYS 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GVAILSK +P + D +D + R I A + + + ++YLP G I Sbjct: 61 AQKKGYSGVAILSKTKPNHVEFGTGIDYMDFEGRNIRADYDG----VSVMSMYLPSGTNI 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K+ ++ F + + LI GDYNI + D +NP+ +N + F Sbjct: 117 DRLSF--KLKYMAEFQEYVTDLKVEHPNLIILGDYNICHKAIDIHNPVGLKNTSGFLPVE 174 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R+ + GF D+ R ++ Y++W Y A++ + NKG R+D+ ++S L A Sbjct: 175 REWIGAFMDNGFIDSFRYFNEEPDKYTWWSYRANARNNNKGWRLDYALVSTPLKDRLKRA 234 Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261 I + K SDH P++V L Sbjct: 235 VILAEA----KHSDHCPILVEL 252 >gi|168209710|ref|ZP_02635335.1| exodeoxyribonuclease III [Clostridium perfringens B str. ATCC 3626] gi|168217871|ref|ZP_02643496.1| exodeoxyribonuclease III [Clostridium perfringens NCTC 8239] gi|170712212|gb|EDT24394.1| exodeoxyribonuclease III [Clostridium perfringens B str. ATCC 3626] gi|182380111|gb|EDT77590.1| exodeoxyribonuclease III [Clostridium perfringens NCTC 8239] Length = 250 Score = 196 bits (497), Expect = 4e-48, Method: Composition-based stats. Identities = 66/256 (25%), Positives = 108/256 (42%), Gaps = 13/256 (5%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + K + DI CLQETK ++ + L+ + + + Sbjct: 1 MKLISWNVNGLRACVKKGFLDYFKSEDADIFCLQETKLQEGQIDLD-LEGYHQYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +P+ + + + D + R I F + Sbjct: 60 KGYSGTAIFTKKEPLNVYYGINMEHHDKEGRVITLEFEDFFMVTVYTPNSQSELARLEYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + R L ++ ++ GD N+ + D NP +A FT E R Sbjct: 120 M------EWEDDFRNYLLELSSKKGVVVCGDLNVAHKEIDLKNPKTNRKNAGFTDEERDK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F L + GF D R + +YS+W Y ++ N G RID+ ++S + A I Sbjct: 174 FSTLLSSGFIDTFRYFNPDIEGVYSWWSYRFNARKNNAGWRIDYFLVSNNLEDRIKEASI 233 Query: 242 DTKPRGWTKPSDHTPV 257 DT+ G SDH PV Sbjct: 234 DTEILG----SDHCPV 245 >gi|20090923|ref|NP_616998.1| DNA-(apurinic or apyrimidinic site) lyase [Methanosarcina acetivorans C2A] gi|19916002|gb|AAM05478.1| DNA-(apurinic or apyrimidinic site) lyase [Methanosarcina acetivorans C2A] Length = 260 Score = 196 bits (497), Expect = 4e-48, Method: Composition-based stats. Identities = 68/260 (26%), Positives = 116/260 (44%), Gaps = 12/260 (4%) Query: 6 VATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETCGQ 62 + +WNVN +RA + + E D+IC+QETK + P E YH + + Sbjct: 7 LISWNVNGLRAAMKKGFLDLLLEQKFDVICVQETKASPEKLPREVKNIPGYHNYFVSAER 66 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 Y+GV SK +P ++ T + ++ D + RF+ + + N+Y P+G + Sbjct: 67 SGYSGVGTFSKQKPFKVETGMGIEEFDREGRFLRVDYE----NFTLMNIYFPNGK-ASQE 121 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + K+S+ FL +A+ + L+ GD N + D P E + F E R Sbjct: 122 RLEYKMSFYDAFLDYANALKAEGKKLVICGDVNTAHREIDLARPKENETTSGFLPEERAW 181 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 K + G+ D R + YS+W + +N G R+D+ +S + +A I Sbjct: 182 MDKFFDAGYLDTFRLFNSEGGNYSWWSLRTRARERNVGWRLDYFFVSENLRDNVKAAPIY 241 Query: 243 TKPRGWTKPSDHTPVIVSLD 262 + G SDH PV + L+ Sbjct: 242 PEITG----SDHCPVGLELE 257 >gi|313637385|gb|EFS02862.1| exodeoxyribonuclease III [Listeria seeligeri FSL S4-171] Length = 251 Score = 196 bits (497), Expect = 4e-48, Method: Composition-based stats. Identities = 65/262 (24%), Positives = 110/262 (41%), Gaps = 13/262 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + + DI CLQETK + + L + + + Sbjct: 1 MKLISWNVNGLRAAVKKGFLEYFDSVDADIFCLQETKLQAGQIDLD-LPAYKDYWNYAVK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +P+ + L + D + R I F + Sbjct: 60 KGYSGTAIFTKTEPLSVQYGLGIPEHDDEGRVITLEFDKFFMVTVYTPNSQAELKRLDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + ++L+ +P++ GD N+ + D NP +A F+ E R Sbjct: 120 M------TFEDAILAYVKKLDETKPVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F GF D+ R + YS+W Y ++ ++N G RID+ ++S L A+I Sbjct: 174 FTAFLEAGFVDSFRYFYPDLEDAYSWWSYRMNARARNTGWRIDYFVVSERLKDNLVDAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 G SDH PV + L+I Sbjct: 234 HPDVLG----SDHCPVELELNI 251 >gi|332111582|gb|EGJ11564.1| exodeoxyribonuclease iii, ap endonuclease, family 1 [Rubrivivax benzoatilyticus JA2] Length = 258 Score = 196 bits (497), Expect = 4e-48, Method: Composition-based stats. Identities = 110/261 (42%), Positives = 163/261 (62%), Gaps = 7/261 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+NVN I AR+ L W+ E+ PD+ CLQE KT D+ FP + +++ Y GQK Sbjct: 1 MKIATFNVNGITARLPRLLEWLAESAPDVACLQELKTSDETFPLQAIEAAGYGAIWHGQK 60 Query: 64 SYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 +NGVA+L++ QP+E + LPGD D +R++EA L +G LYLP+GNP Sbjct: 61 GFNGVAVLARGQQPVERLRGLPGDPDDTHSRYLEAQVG----ELIVGALYLPNGNPQPGP 116 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP--HDCYNPIIWENDACFTLEVR 180 K+D K+ W++R A+ + L+ P++ AGDYN++P D Y+P W+NDA E R Sbjct: 117 KFDYKLKWMQRLHEHAATLVGLDAPVVLAGDYNVVPTDAVRDIYSPKGWQNDALLQPESR 176 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 Q++Q+L +GFTDA+ H +Y++WDY+ W +N G+RIDH++L+ A + L +A Sbjct: 177 QAYQRLLELGFTDALATLHGDAAMYTYWDYFRQRWERNAGLRIDHLLLNAPAAARLKAAE 236 Query: 241 IDTKPRGWTKPSDHTPVIVSL 261 +D RG KPSDH PV V L Sbjct: 237 VDRFIRGREKPSDHAPVWVDL 257 >gi|241663220|ref|YP_002981580.1| exodeoxyribonuclease III Xth [Ralstonia pickettii 12D] gi|240865247|gb|ACS62908.1| exodeoxyribonuclease III Xth [Ralstonia pickettii 12D] Length = 269 Score = 196 bits (497), Expect = 4e-48, Method: Composition-based stats. Identities = 95/266 (35%), Positives = 145/266 (54%), Gaps = 8/266 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPD-----IICLQETKTEDKNFPFETLQSLNYHIE 58 + VATWNVNS++ R+ ++ W+ E D ++CLQE K D +P L + Y Sbjct: 1 MRVATWNVNSLKVRLPHVLQWLAEREADATPIDLLCLQELKLPDDRYPLAELDAAGYTSL 60 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDL---DVQARFIEATFTINTQTLRIGNLYLPH 115 GQK+YNGVAILS+ + + + D Q R + AT+ ++ +R+ + Y+P+ Sbjct: 61 FTGQKTYNGVAILSRKASVPEGRDVVKNIPGFTDDQQRIVAATYDVDGGPVRVISAYIPN 120 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 G + S K+ K+ W++ + + + L+ GD+NI P+ D ++P WE Sbjct: 121 GQALDSDKFVYKLRWLEALQAWLTSEMAANPRLMLLGDFNIAPEDRDVHDPKKWEGQNLV 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 + E R +F+ +Q G DA R L+S+WDY + +N G+RIDHIMLSPE L Sbjct: 181 SPEERAAFRAMQAAGLVDAFRMFEQEDKLFSWWDYRMFGFKRNAGLRIDHIMLSPELAKL 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 S ID PR W +PSDHTPV+ +L Sbjct: 241 CESCHIDRVPRTWEQPSDHTPVVAAL 266 >gi|148259957|ref|YP_001234084.1| exodeoxyribonuclease III Xth [Acidiphilium cryptum JF-5] gi|326403089|ref|YP_004283170.1| exodeoxyribonuclease III [Acidiphilium multivorum AIU301] gi|146401638|gb|ABQ30165.1| exodeoxyribonuclease III Xth [Acidiphilium cryptum JF-5] gi|325049950|dbj|BAJ80288.1| exodeoxyribonuclease III [Acidiphilium multivorum AIU301] Length = 256 Score = 196 bits (497), Expect = 4e-48, Method: Composition-based stats. Identities = 106/258 (41%), Positives = 148/258 (57%), Gaps = 4/258 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS R R +A ++K PD++ LQE K E + FP ++ Y E GQK Sbjct: 1 MRIATWNVNSARTRAGLIADFLKREQPDLLLLQEIKCETQQFPAAAFEAEGYRAEVVGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVA+LS+ LPG++ D ARFIE L +GNLYLP+GN Sbjct: 61 AYNGVAVLSRGAVTVTHRRLPGEEEDAAARFIEIEAGG----LLVGNLYLPNGNSGGGDG 116 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W+++ R A+ LE + I AGDYN+ P D + +DA E R +F Sbjct: 117 FAAKLDWMEKLRRHAASLLEHDRDFILAGDYNVCPTDADLAKGALPADDALVRPESRAAF 176 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + L +G TDA+RA H LY+FWDY A +W +++G+RIDH +LSP L + R+ Sbjct: 177 RALIWLGLTDALRALHPDETLYTFWDYQAGAWQRDRGLRIDHALLSPRVAERLDTVRVAR 236 Query: 244 KPRGWTKPSDHTPVIVSL 261 + R +PSDH PVIVSL Sbjct: 237 EERDKPQPSDHVPVIVSL 254 >gi|330993300|ref|ZP_08317236.1| Exodeoxyribonuclease III [Gluconacetobacter sp. SXCC-1] gi|329759702|gb|EGG76210.1| Exodeoxyribonuclease III [Gluconacetobacter sp. SXCC-1] Length = 261 Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats. Identities = 94/259 (36%), Positives = 137/259 (52%), Gaps = 3/259 (1%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 ++ + TWNVNSIR R ++ ++ PD++ LQE K FP + + Y GQ Sbjct: 1 MMKLVTWNVNSIRQRCDHVLDYLAREQPDVLALQEIKCATDLFPADAFRKAGYECTAVGQ 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 KSYNGVA+L++ T LPG + I T L +GNLYLP+GN S Sbjct: 61 KSYNGVAMLARQPFTVTHTALPGWE---TTPPQARYVEIRTGGLVVGNLYLPNGNSGGSA 117 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 YD K+++++ A L+ + + GDYN+ P DC + DA E R + Sbjct: 118 GYDSKLAFMEALALHARGLLQAGQDFVLMGDYNVCPTDEDCAPGALPPTDALVRPESRAA 177 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F++L +G TDA+RA H Y+FWDY A +W ++ G+RIDH +LSP L +A Sbjct: 178 FRRLLWLGLTDALRALHPAGRFYTFWDYQAAAWQRDSGLRIDHALLSPRVAERLLTALPA 237 Query: 243 TKPRGWTKPSDHTPVIVSL 261 RG +PSDH P+ ++L Sbjct: 238 RDERGKPQPSDHVPLAITL 256 >gi|88854941|ref|ZP_01129607.1| exodeoxyribonuclease III [marine actinobacterium PHSC20C1] gi|88816102|gb|EAR25958.1| exodeoxyribonuclease III [marine actinobacterium PHSC20C1] Length = 278 Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats. Identities = 72/277 (25%), Positives = 122/277 (44%), Gaps = 10/277 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+R R+ + W+ + D++ +QE K + + FP + Y +E G Sbjct: 1 MRIATWNVNSVRTRVSRVVDWMLREDIDVLAMQEIKCKPEQFPHDAFTDAGYEVELHGLS 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQA------RFIEATFTINTQTLRIGNLYLPHGN 117 +NGVA S+ ++ + + R+ +LY+P+G Sbjct: 61 QWNGVAFASRLPMEDVTVGFDTQPGFGKPLDDGTIPIEARAIGVTVSGARLWSLYVPNGR 120 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACF 175 + + Y K+ W+ S + GD+NI P D ++ +E Sbjct: 121 ELDNPHYPYKLEWLANLAAQTSNWMRENPEQPLALMGDFNIAPLDIDVWDVAAFEGKTHI 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 + R +F + G DA+R+ Y++WDY + +N+G+RID I+ SP+ L Sbjct: 181 SEPERAAFAAFEKAGLIDALRSRG--IKGYTYWDYQRLRFPRNEGMRIDFILGSPQFDEL 238 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQD 272 + A ID + R PSDH PV+V L I + Sbjct: 239 VTGASIDREERKGDGPSDHVPVVVDLAIDTEDDDDRP 275 >gi|86141021|ref|ZP_01059580.1| exodeoxyribonuclease [Leeuwenhoekiella blandensis MED217] gi|85832963|gb|EAQ51412.1| exodeoxyribonuclease [Leeuwenhoekiella blandensis MED217] Length = 255 Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats. Identities = 88/263 (33%), Positives = 135/263 (51%), Gaps = 13/263 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETC 60 + + T+NVN IRA I L W+K NPD++ LQETK + + + YH + Sbjct: 1 MKIITYNVNGIRAAIRKGLLDWLKAANPDVLLLQETKAHKEQLDIDLFEETGYHDYWFSA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GVAILSK +P IV D +D + R I A F L + ++YLP G + Sbjct: 61 QKKGYSGVAILSKKEPDNIVHGTGIDYMDHEGRNIRADFG----DLSVMSMYLPSGTNVD 116 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K+ ++ F ++ + + LI +GDYNI +P D ++P+ +N + F R Sbjct: 117 R--LEHKLKYMADFQAYSEELRKTRPNLIVSGDYNICHEPIDIHDPVRLKNVSGFLPVER 174 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + N GFTD+ R + YS+W Y AD+ + NKG R+D+ M+S + A Sbjct: 175 EWLSGFINSGFTDSFRHLNPNVEQYSWWSYRADARANNKGWRLDYNMVSEPLKDKIKRAV 234 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263 I + K SDH P +V LD+ Sbjct: 235 ILPEA----KHSDHCPALVELDL 253 >gi|313632791|gb|EFR99747.1| exodeoxyribonuclease III [Listeria seeligeri FSL N1-067] Length = 251 Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats. Identities = 63/262 (24%), Positives = 108/262 (41%), Gaps = 13/262 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + + DI CLQETK + + +Y + Sbjct: 1 MKLISWNVNGLRAAVKKGFLEYFDSVDADIFCLQETKLQAGQIDLDLPAYKDY-WNYAVK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G +K +P+ + L ++ D + R I F + Sbjct: 60 KGYSGTXXFTKKEPLSVQYGLGIEEHDTEGRVITLEFEKFFMVTVYTPNSQAELKRLDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + ++L+ +P++ GD N+ + D NP +A F+ E R Sbjct: 120 M------TFEDAILAYVKKLDETKPVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F GF D+ R + YS+W Y ++ ++N G RID+ ++S L A+I Sbjct: 174 FTAFLEAGFVDSFRYFYPDLEDAYSWWSYRMNARARNIGWRIDYFVVSERLKDNLVDAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 G SDH PV + L+I Sbjct: 234 HPDVLG----SDHCPVELELNI 251 >gi|29346040|ref|NP_809543.1| exodeoxyribonuclease [Bacteroides thetaiotaomicron VPI-5482] gi|29337934|gb|AAO75737.1| exodeoxyribonuclease [Bacteroides thetaiotaomicron VPI-5482] Length = 253 Score = 195 bits (496), Expect = 5e-48, Method: Composition-based stats. Identities = 82/262 (31%), Positives = 137/262 (52%), Gaps = 12/262 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60 + + T+NVN +RA L W+ + NPDI+CLQETK + +P E ++L Y ++ + Sbjct: 1 MKIITYNVNGLRAAASKGLPEWLVQENPDILCLQETKLQPDQYPAEVFEALGYKAYLYSA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GVAIL+K +P + + + D + RFI A F L + ++Y P G Sbjct: 61 QKKGYSGVAILTKQEPDHVEYGMGIEAYDNEGRFIRADFG----DLSVVSVYHPSG-TSG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K+ W++ F ++ ++ + LI GDYNI +P D ++P+ ++ F E R Sbjct: 116 DERQAFKMVWLEDFQKYVTELRKTRPNLILCGDYNICHEPIDIHDPVRNATNSGFLPEER 175 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + + + GF D+ R + Y++W Y +S +KNKG RID+ M S +L SA Sbjct: 176 EWMTRFLSAGFIDSFRLLYPEKQEYTWWSYRFNSRAKNKGWRIDYCMTSEPVRPMLKSAS 235 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I SDH P+ + ++ Sbjct: 236 ILNDA----VHSDHCPMALEIE 253 >gi|224500776|ref|ZP_03669125.1| hypothetical protein LmonF1_14336 [Listeria monocytogenes Finland 1988] gi|254829588|ref|ZP_05234275.1| exodeoxyribonuclease [Listeria monocytogenes FSL N3-165] gi|284802226|ref|YP_003414091.1| hypothetical protein LM5578_1982 [Listeria monocytogenes 08-5578] gi|284995368|ref|YP_003417136.1| hypothetical protein LM5923_1933 [Listeria monocytogenes 08-5923] gi|258602005|gb|EEW15330.1| exodeoxyribonuclease [Listeria monocytogenes FSL N3-165] gi|284057788|gb|ADB68729.1| hypothetical protein LM5578_1982 [Listeria monocytogenes 08-5578] gi|284060835|gb|ADB71774.1| hypothetical protein LM5923_1933 [Listeria monocytogenes 08-5923] Length = 251 Score = 195 bits (496), Expect = 5e-48, Method: Composition-based stats. Identities = 65/261 (24%), Positives = 111/261 (42%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + +E + DI CLQETK ++ + +Y + Sbjct: 1 MRLISWNVNGLRAAVKKGFLEYFEEVDADIFCLQETKLQEGQIELDLPAYKDY-WNYAVK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +P+ + L + D + R I F + Sbjct: 60 KGYSGTAIFTKVEPLSVQYGLGIPEHDTEGRVITLEFEEFFMVTVYTPNSQAELKRLDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + + L+ +P++ GD N+ + D NP +A F+ E R Sbjct: 120 M------TFEDAILEYVKNLDNTKPVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F + GF D+ R + YS+W Y ++ ++N G RID+ ++S L A+I Sbjct: 174 FSAFLDAGFIDSFRYFYPDLTDAYSWWSYRMNARARNTGWRIDYFVVSERLKDKLVDAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 G SDH PV + L+ Sbjct: 234 HADVLG----SDHCPVELELN 250 >gi|299066602|emb|CBJ37792.1| EXODEOXYRIBONUCLEASE III [Ralstonia solanacearum CMR15] Length = 269 Score = 195 bits (496), Expect = 5e-48, Method: Composition-based stats. Identities = 93/266 (34%), Positives = 141/266 (53%), Gaps = 8/266 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPD-----IICLQETKTEDKNFPFETLQSLNYHIE 58 + VATWNVNS++ R+ ++ W+ E D ++CLQE K D +P L++ Y Sbjct: 1 MRVATWNVNSLKVRLPHVLQWLGEREADATPIDLLCLQELKLPDDRYPLAELEAAGYASL 60 Query: 59 TCGQKSYNGVAILSKYQPIEIVTH---LPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 GQK+YNGVAIL++ + D Q R + AT+ + +R+ + Y P+ Sbjct: 61 FTGQKTYNGVAILARKAAMPEGRDVVRNIPGFADEQQRVVAATYEVAGGPVRVISAYFPN 120 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 G + S K K+ W+ + + L+ GD+NI P D ++P WE Sbjct: 121 GQALDSDKMVYKMRWLAALQAWLQAEMAAHPRLMLLGDFNIAPDDRDVHDPKKWEGMNLV 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 + E R +F+ L++ G DA R L+S+WDY ++ +N G+RIDHI+LSP+ L Sbjct: 181 SPEERAAFRALESAGLVDAFRMFEQEDKLFSWWDYRLFAFRRNAGLRIDHILLSPDLARL 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 S ID PRGW +PSDHTPV+ +L Sbjct: 241 CESCHIDRVPRGWEQPSDHTPVVAAL 266 >gi|304314422|ref|YP_003849569.1| DNA lyase [Methanothermobacter marburgensis str. Marburg] gi|302587881|gb|ADL58256.1| predicted DNA lyase [Methanothermobacter marburgensis str. Marburg] Length = 257 Score = 195 bits (496), Expect = 5e-48, Method: Composition-based stats. Identities = 64/266 (24%), Positives = 111/266 (41%), Gaps = 12/266 (4%) Query: 1 MSVVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 M+ + + +WNVN +RA W + PDI+CLQETK + P Y Sbjct: 1 MAEIKIISWNVNGLRAVYRKGFLDWFMDEKPDILCLQETKASPEQLPRRLRHVEGYRSFF 60 Query: 60 CG--QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 +K Y+GVA+ ++ P I + D++ R A F + N+Y P+G Sbjct: 61 TPAERKGYSGVAMYTRIPPKSIREGFGVERFDIEGRIQVADFD----DFLLYNIYFPNGK 116 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 K+ + FL ++ + + GD+N + D P N + F Sbjct: 117 MSDER-LKYKLEFYDAFLEDVNRERDAGRNTVICGDFNTAHREIDLARPKENSNVSGFLP 175 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 R K G+ D R ++ Y++W Y + +N G R+D+ ++ E + Sbjct: 176 VERAWIDKFIENGYVDTFRMFNNESGQYTWWSYRTRARERNVGWRLDYFFVNEEFAKNVK 235 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263 + I ++ G SDH PV + +++ Sbjct: 236 RSWILSEVMG----SDHCPVGLEIEV 257 >gi|329298723|ref|ZP_08256059.1| exonuclease III [Plautia stali symbiont] Length = 268 Score = 195 bits (496), Expect = 5e-48, Method: Composition-based stats. Identities = 80/268 (29%), Positives = 126/268 (47%), Gaps = 8/268 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +R+R H LAA ++++ PD+I LQETK D FP E + L Y++ GQK Sbjct: 1 MKFISFNINGLRSRPHQLAALVEQHQPDVIGLQETKVHDDMFPLEEVSKLGYNMFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 + GVA+L+K QP+ + P D D Q R I A + + N Y P G Sbjct: 61 GHYGVALLTKTQPVAVRRGFPDDGEDSQRRLIMAEIPSPIGDITVINGYFPQGESRDHPI 120 Query: 124 -YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 + K + + + Q+L ++P++ GD NI + + F Sbjct: 121 KFPAKEKFYRDLQSYLEQQLAADKPVLIMGDMNISSTDLDIGIGEENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +L G D R + +S++DY + + N+G+RID ++ SP S Sbjct: 181 PEEREWMDRLLQWGLVDTWREKNPETADRFSWFDYRSKGFDDNRGLRIDLLLASPPLASR 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + ID R KPSDH PV S + Sbjct: 241 CIDSGIDYAIRSMDKPSDHAPVWSSFKL 268 >gi|304396123|ref|ZP_07378005.1| exodeoxyribonuclease III [Pantoea sp. aB] gi|304356492|gb|EFM20857.1| exodeoxyribonuclease III [Pantoea sp. aB] Length = 272 Score = 195 bits (496), Expect = 5e-48, Method: Composition-based stats. Identities = 80/267 (29%), Positives = 126/267 (47%), Gaps = 8/267 (2%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 ++ ++N+N +RAR H L A ++++ PD+I LQETK D FP E + L YH+ GQ Sbjct: 4 LMKFVSFNINGLRARPHQLQALVEQHQPDVIGLQETKVHDDMFPLEEVSKLGYHVFYHGQ 63 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K + GVA+L+K QP+ + P DD + Q R I A + + N Y P G Sbjct: 64 KGHYGVALLTKAQPVSVSRGFPDDDDESQRRLIVAEIPSPIGDITVINGYFPQGESRDHP 123 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175 K+ K + + R + L ++P++ GD NI D + F Sbjct: 124 TKFPAKEKFYRDLQRLLTDDLPADKPVLIMGDMNISSTDLDIGIGEDNRKRWLRTGKCSF 183 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R+ +L + G D R + +S++DY + + N+G+RID +++S S Sbjct: 184 LPEEREWMDRLLSWGLVDTWRVHNPEVADRFSWFDYRSKGFDDNRGLRIDLVLVSKNLAS 243 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261 ID R KPSDH P+ + Sbjct: 244 HCVETGIDYAIRSMEKPSDHAPIWSTF 270 >gi|294626440|ref|ZP_06705040.1| exodeoxyribonuclease III [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292599239|gb|EFF43376.1| exodeoxyribonuclease III [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 259 Score = 195 bits (496), Expect = 5e-48, Method: Composition-based stats. Identities = 87/259 (33%), Positives = 136/259 (52%), Gaps = 6/259 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A+WNVNS+ R+ +L W+ PD++ +QETK ED FP L +L Y CGQK Sbjct: 1 MKIASWNVNSLNVRLPHLQQWLAAFAPDVVGIQETKLEDHKFPDAALAALGYRSVFCGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAILS+ +++ +PG D Q +RI NLY+ +G + + K Sbjct: 61 TYNGVAILSRSPAVDVQMGIPGLDDVQQRVIAATVDG-----VRIINLYVVNGQDVGTDK 115 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN-PIIWENDACFTLEVRQS 182 Y K+ W+ + +Q L+ L+ GD+NI P D ++ + E+ + + R + Sbjct: 116 YAYKLRWLAAAHDWIAQELQRYPQLVVLGDFNIAPDARDVHDATVWNEHHILTSTDERAA 175 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 KL +G DA R + +S+WDY + +N G+RID ++S + + ID Sbjct: 176 LDKLLALGLHDAFRLHNQDAEHFSWWDYRQAGFRRNLGLRIDLTLVSDTLCARAVESGID 235 Query: 243 TKPRGWTKPSDHTPVIVSL 261 +PR W +PSDH P V L Sbjct: 236 REPRTWERPSDHAPAWVRL 254 >gi|319779595|ref|YP_004130508.1| Exodeoxyribonuclease III [Taylorella equigenitalis MCE9] gi|317109619|gb|ADU92365.1| Exodeoxyribonuclease III [Taylorella equigenitalis MCE9] Length = 260 Score = 195 bits (496), Expect = 5e-48, Method: Composition-based stats. Identities = 88/263 (33%), Positives = 143/263 (54%), Gaps = 3/263 (1%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 M +TVA+WNVNS+ R+ + W++E + D++CLQE K E + +S+ Y I Sbjct: 1 MVTLTVASWNVNSLNVRLDQVLDWLREFDVDLLCLQELKMESQKIDSSLFESIGYGIYAL 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 GQK+YNGVA++SK+ ++V +LP + D Q R + T +I+ + +RI N+Y P+G+ + Sbjct: 61 GQKTYNGVALISKHPITDLVENLPNYE-DPQKRLLAGTLSIDKKQVRIVNVYCPNGSDLE 119 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 S K+ K+ W + +L E LI GD+NI P+ D + + + + R Sbjct: 120 SPKFSYKMEWFSALRTYIEDQLNTNENLILTGDFNIAPKDEDIHPK--YLGPILISPQER 177 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 F+ L ++G D R + +S+WDY + +N G+RIDHI+ S + + Sbjct: 178 AHFEALLDLGLVDTFRLFEQEQNSFSWWDYRQFGFKRNAGLRIDHILASSSLGKKCYKSW 237 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263 ID K R +PSDH PV+ + Sbjct: 238 IDKKQRAHERPSDHAPVLAEFKL 260 >gi|311745078|ref|ZP_07718863.1| exodeoxyribonuclease III [Algoriphagus sp. PR1] gi|311302328|gb|EAZ81811.2| exodeoxyribonuclease III [Algoriphagus sp. PR1] Length = 253 Score = 195 bits (496), Expect = 5e-48, Method: Composition-based stats. Identities = 72/262 (27%), Positives = 117/262 (44%), Gaps = 12/262 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60 + + ++NVN IRA + W+K+ +P++I LQE K + + L Y + Sbjct: 1 MKIVSYNVNGIRAAMNKGFLDWLKQTDPEVIGLQEVKAMEDQIDTSIFKDLGYKVYWYPA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GVAILSK P I + D + R +E F + Sbjct: 61 QKKGYSGVAILSKITPKSIHHGMGLQKYDDEGRLLEIEFEDFSF-----LSAYFPSGTTG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K ++ + + LI +GDYNI + D +NP+ +N + F E R Sbjct: 116 DIRQTFKYEFLDDIYGYIKDLRRTKPNLILSGDYNICHKAIDIHNPVSNKNSSGFLPEER 175 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 K GF D R + H Y++W Y A++ +KN G RID+ M + + + L + Sbjct: 176 VWMDKFTESGFIDTFRHFNPEPHQYTWWSYRANARAKNLGWRIDYHMATKDMENRLKRSV 235 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I + K SDH P++V L+ Sbjct: 236 ILPEA----KHSDHCPILVELN 253 >gi|91205020|ref|YP_537375.1| exodeoxyribonuclease III [Rickettsia bellii RML369-C] gi|157827649|ref|YP_001496713.1| exodeoxyribonuclease III [Rickettsia bellii OSU 85-389] gi|91068564|gb|ABE04286.1| Exodeoxyribonuclease III [Rickettsia bellii RML369-C] gi|157802953|gb|ABV79676.1| Exodeoxyribonuclease III [Rickettsia bellii OSU 85-389] Length = 261 Score = 195 bits (496), Expect = 5e-48, Method: Composition-based stats. Identities = 104/261 (39%), Positives = 145/261 (55%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+NSI+ RI+ L ++ NPD++ LQE K E FPFE L L Y+ GQK Sbjct: 1 MKIATWNINSIKMRINILRDFLANENPDVLLLQELKCESDKFPFEELSDLPYNFYVHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 SYNGVAILSK+ EIV P + QARFIEA ++ I +LY P+G+ + S K Sbjct: 61 SYNGVAILSKFPADEIVKDFPNNHCSDQARFIEARISLPIGFCNIISLYAPNGSMVGSDK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+++ F + S + +E I GD+NI P D Y+P N CFT ++ Sbjct: 121 FTAKLAFYDSFFNYLSSKKSFDEKTIIGGDFNIAPFDIDVYSPTALANTTCFTEIEQKKM 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + + N GF D R H +S+WDY A + +NKG+RID I+ S + L + +D Sbjct: 181 RTILNSGFEDCYRFLHPKKQEFSWWDYRAGCFEQNKGMRIDMILGSNNSIDYLENCYMDY 240 Query: 244 KPRGWTKPSDHTPVIVSLDIP 264 R KPSDH PVI + P Sbjct: 241 NLRTKEKPSDHIPVIANFKNP 261 >gi|19703399|ref|NP_602961.1| exodeoxyribonuclease III [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296328758|ref|ZP_06871272.1| exodeoxyribonuclease III [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|19713467|gb|AAL94260.1| Exodeoxyribonuclease III [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296154093|gb|EFG94897.1| exodeoxyribonuclease III [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 253 Score = 195 bits (496), Expect = 5e-48, Method: Composition-based stats. Identities = 73/261 (27%), Positives = 113/261 (43%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN IRA I + E N DI CLQETK E L+ + + + Sbjct: 1 MKLISWNVNGIRAAIKKGFLDYFNEQNADIFCLQETKLSAGQLDLE-LKGYHQYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +P+ + L ++ D + R I F + Sbjct: 60 KGYSGTAIFTKQEPLSVSYGLGIEEHDKEGRVITLEFEKFYMVTVYTPNSKDELLRLDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + R + LE ++P++ GD N+ + D NP +A FT E R Sbjct: 120 M------VWEDEFRKYLKNLEKKKPVVVCGDLNVAHKEIDLKNPKTNRRNAGFTDEERGK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L + GF D R + +YS+W Y + N G RID+ ++S L A I Sbjct: 174 FTELLDSGFIDTFRYFYPNLEQVYSWWSYRGRARENNAGWRIDYFVVSKGLEKSLVDAEI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 ++ G SDH PV++ L+ Sbjct: 234 HSQIEG----SDHCPVVLFLE 250 >gi|121602003|ref|YP_988961.1| exodeoxyribonuclease III [Bartonella bacilliformis KC583] gi|121602536|ref|YP_988991.1| exodeoxyribonuclease III [Bartonella bacilliformis KC583] gi|120614180|gb|ABM44781.1| exodeoxyribonuclease III [Bartonella bacilliformis KC583] gi|120614713|gb|ABM45314.1| exodeoxyribonuclease III [Bartonella bacilliformis KC583] Length = 263 Score = 195 bits (495), Expect = 6e-48, Method: Composition-based stats. Identities = 136/259 (52%), Positives = 183/259 (70%), Gaps = 1/259 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+ I+AR L W+++N PDI+CLQETKT D+NFP +T++SL YHIET GQK Sbjct: 1 MRIATWNIAGIKARHETLCKWLQQNQPDIVCLQETKTIDENFPRDTIESLGYHIETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVAILSK +P EI+THLPG++ D QAR+IEA ++ N +RI ++YLP+GNPI S K Sbjct: 61 KFNGVAILSKKRPDEIITHLPGNNNDEQARYIEAVYSTNKGAIRIASVYLPNGNPINSEK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W++R A L EEPLI AGDYN+IP D NP W++DA F L+ RQ+F Sbjct: 121 YLYKMEWMERLYTHAKSLLTYEEPLILAGDYNVIPTLSDAKNPQEWKHDALFLLQTRQAF 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q++ ++GF DA+R+ + +SFW++ A +W KN GIRIDH +LS EA L A T Sbjct: 181 QRIIHLGFYDALRSVTEDP-SFSFWNFQAGAWFKNNGIRIDHFLLSSEAIDQLICAYSQT 239 Query: 244 KPRGWTKPSDHTPVIVSLD 262 + RG+ PSDHTPV + LD Sbjct: 240 EVRGYKNPSDHTPVWIELD 258 >gi|288574097|ref|ZP_06392454.1| exodeoxyribonuclease III Xth [Dethiosulfovibrio peptidovorans DSM 11002] gi|288569838|gb|EFC91395.1| exodeoxyribonuclease III Xth [Dethiosulfovibrio peptidovorans DSM 11002] Length = 259 Score = 195 bits (495), Expect = 6e-48, Method: Composition-based stats. Identities = 91/260 (35%), Positives = 137/260 (52%), Gaps = 5/260 (1%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64 T+AT+NVNS+R+R+ L W+ ++ D++CLQETK D++FP + + Y + GQKS Sbjct: 4 TIATFNVNSVRSRLPILERWLNDSKVDVLCLQETKARDEDFPLQAFVDMGYFVAFRGQKS 63 Query: 65 YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124 YNGVAI S +P EIV + F ++ + + N Y+P G I Y Sbjct: 64 YNGVAIASLEEPDEIVYGFDDGK---EPVFDTRALSVRFGDIWVMNTYVPQGKSIDHDDY 120 Query: 125 DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ 184 K +++R R S R+ + +++ GD N+ P+ D NP CF ++R F Sbjct: 121 LMKQEFLRRTQRTISDRISDGKRVLWVGDMNVAPEEKDVANPKNKAKHVCFHRDIRDLFG 180 Query: 185 KLQNMGFTDAIRATHDTHHLYSFWDYY-ADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + D R+ +SFWDY ++ +N G RIDHI+ SP+ L + + Sbjct: 181 TVCQG-LVDVFRSHRPEEGEFSFWDYRVKNALDRNIGWRIDHILASPDLAKLSSDSWVYR 239 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 PRGW KPSDHTPV+ S D+ Sbjct: 240 DPRGWEKPSDHTPVLASFDL 259 >gi|168214660|ref|ZP_02640285.1| exodeoxyribonuclease III [Clostridium perfringens CPE str. F4969] gi|170713849|gb|EDT26031.1| exodeoxyribonuclease III [Clostridium perfringens CPE str. F4969] Length = 250 Score = 195 bits (495), Expect = 6e-48, Method: Composition-based stats. Identities = 66/256 (25%), Positives = 107/256 (41%), Gaps = 13/256 (5%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + K + DI CLQETK ++ + L+ + + Sbjct: 1 MKLISWNVNGLRACVKKGFLDYFKSEDADIFCLQETKLQEGQIDLD-LEGYFQYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +P+ + + + D + R I F + Sbjct: 60 KGYSGTAIFTKKEPLNVYYGINMEHHDKEGRVITLEFEDFFMVTVYTPNSQSELARLEYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + R L ++ ++ GD N+ + D NP +A FT E R Sbjct: 120 M------EWEDDFRNYLLELSSKKGVVVCGDLNVAHKEIDLKNPKTNRKNAGFTDEERDK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F L + GF D R + +YS+W Y ++ N G RID+ ++S + A I Sbjct: 174 FSTLLSSGFIDTFRYFNPDLEGVYSWWSYRFNARKNNAGWRIDYFLVSNNLEDRIKEASI 233 Query: 242 DTKPRGWTKPSDHTPV 257 DT+ G SDH PV Sbjct: 234 DTEILG----SDHCPV 245 >gi|187779869|ref|ZP_02996342.1| hypothetical protein CLOSPO_03465 [Clostridium sporogenes ATCC 15579] gi|187773494|gb|EDU37296.1| hypothetical protein CLOSPO_03465 [Clostridium sporogenes ATCC 15579] Length = 253 Score = 195 bits (495), Expect = 6e-48, Method: Composition-based stats. Identities = 67/262 (25%), Positives = 109/262 (41%), Gaps = 12/262 (4%) Query: 4 VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC-- 60 + + +WNVN +RA N WI E NPDI+C+QETK ++ Y+ Sbjct: 1 MRIYSWNVNGLRAVAKKNFLEWIGEENPDILCIQETKLQENQLEDNIKNIDGYYSYFSFA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GVA +K +PI + + + D + R + F I Sbjct: 61 HKKGYSGVATYTKEEPISVKHGIGIERFDSEGRILITEFKDF-----ILLNIYFPNGQRD 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K+ + + + + +E + L+ GDYN D NP E + F R Sbjct: 116 EERLQYKLDFYEALFNYCDELVEEGKKLVICGDYNTAHNEIDLKNPKANEKASGFLRIER 175 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 K+ G+ D R + YS+W Y + +N G RID+ +S + + Sbjct: 176 DWLDKIIERGYIDTFRNMNPDKIKYSWWSYRFKARERNAGWRIDYHFVSNNLLDRVENTE 235 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I + G SDH PV++ L+ Sbjct: 236 ILNEVYG----SDHCPVMLELE 253 >gi|169345728|ref|ZP_02865687.1| exodeoxyribonuclease III [Clostridium perfringens C str. JGS1495] gi|169297128|gb|EDS79244.1| exodeoxyribonuclease III [Clostridium perfringens C str. JGS1495] Length = 250 Score = 195 bits (495), Expect = 6e-48, Method: Composition-based stats. Identities = 66/256 (25%), Positives = 107/256 (41%), Gaps = 13/256 (5%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + K + DI CLQETK ++ + L+ + + Sbjct: 1 MKLISWNVNGLRACVKKGFLDYFKSEDADIFCLQETKLQEGQIDLD-LEGYFQYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +P+ + + + D + R I F + Sbjct: 60 KGYSGTAIFTKKEPLNVYYGINMEHHDKEGRVITLEFEDFFMVTVYTPNSQSELARLEYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + R L ++ ++ GD N+ + D NP +A FT E R Sbjct: 120 M------EWEDDFRNYLLELSSKKGVVVCGDLNVAHKEIDLKNPKTNRKNAGFTDEERDK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F L + GF D R + +YS+W Y ++ N G RID+ ++S + A I Sbjct: 174 FSTLLSSGFIDTFRYFNPDLEGVYSWWSYRFNARKNNAGWRIDYFLVSNNLEDRIKEAFI 233 Query: 242 DTKPRGWTKPSDHTPV 257 DT+ G SDH PV Sbjct: 234 DTEILG----SDHCPV 245 >gi|149926852|ref|ZP_01915111.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Limnobacter sp. MED105] gi|149824404|gb|EDM83622.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Limnobacter sp. MED105] Length = 266 Score = 195 bits (495), Expect = 6e-48, Method: Composition-based stats. Identities = 86/256 (33%), Positives = 128/256 (50%), Gaps = 1/256 (0%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSY 65 +ATWNVNS++ R+ +L W++ N D++ LQE K D+NFP L++ Y GQK+Y Sbjct: 10 LATWNVNSLKVRLPHLLQWLEGNPVDLLGLQELKLTDENFPLTELEAAGYGAVYAGQKTY 69 Query: 66 NGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYD 125 NGVAIL K + + + LR + Y+ +G+ + S K++ Sbjct: 70 NGVAILYKKATMPEPVDVQVNLPSFPDEQKRVIAATFGD-LRFISAYVVNGSEVGSDKFE 128 Query: 126 DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQK 185 K +W+ L+ L L GDYNI P D ++P W + + R F Sbjct: 129 YKKAWLDALLKDCDAWLAQYPKLALVGDYNIAPDDRDVHDPKAWAGQVLCSDDERGRFNT 188 Query: 186 LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKP 245 L +MG D+ R +S+WDY + KNKG+RIDH++LS ++ ID P Sbjct: 189 LLDMGLVDSFRLFEQPEKTFSWWDYRMLGFQKNKGLRIDHVLLSKPLAERCTASVIDRAP 248 Query: 246 RGWTKPSDHTPVIVSL 261 R W KPSDH P + +L Sbjct: 249 RKWEKPSDHAPAVATL 264 >gi|291617653|ref|YP_003520395.1| XthA [Pantoea ananatis LMG 20103] gi|291152683|gb|ADD77267.1| XthA [Pantoea ananatis LMG 20103] gi|327394080|dbj|BAK11502.1| exodeoxyribonuclease III XthA [Pantoea ananatis AJ13355] Length = 268 Score = 195 bits (495), Expect = 6e-48, Method: Composition-based stats. Identities = 84/266 (31%), Positives = 129/266 (48%), Gaps = 8/266 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A ++++ PD+I LQETK D FP E + L Y++ GQK Sbjct: 1 MKFISFNINGLRARPHQLEALVEKHQPDVIGLQETKVHDDMFPLEDVAKLGYNVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122 + GVA+L+K QP+ + PGDD D Q R I A + + N Y P G Sbjct: 61 GHYGVALLTKVQPVSVRRGFPGDDDDAQRRLIMAEIPSPIGDITVINGYFPQGESRDHPT 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + + + S L ++P++ GD NI D + F Sbjct: 121 KFPAKEKFYRDLQSYLSDSLAADKPVLIMGDMNISSTDLDIGIGEDSRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +L + G D RA + + +S++DY + + N+G+RID ++ S S Sbjct: 181 PEEREWMDRLLSWGLVDTWRAQNPEINDRFSWFDYRSKGFDDNRGLRIDLLLASTGLASH 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 ID + RG KPSDH PV + Sbjct: 241 CIETGIDYEIRGMEKPSDHAPVWSTF 266 >gi|167762826|ref|ZP_02434953.1| hypothetical protein BACSTE_01184 [Bacteroides stercoris ATCC 43183] gi|167699166|gb|EDS15745.1| hypothetical protein BACSTE_01184 [Bacteroides stercoris ATCC 43183] Length = 266 Score = 195 bits (495), Expect = 6e-48, Method: Composition-based stats. Identities = 83/261 (31%), Positives = 137/261 (52%), Gaps = 12/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60 + + T+NVN +RA + L W+ + PD++CLQETK + + +P E L +L Y ++ + Sbjct: 13 MKIITYNVNGLRAAVSKGLPEWLAKEQPDVLCLQETKLQPEQYPAEALDALGYRHYLHSA 72 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GVAIL+K +P + + ++ D + RF+ A + L + ++Y P G Sbjct: 73 RKKGYSGVAILTKREPDYVEYGMGMEEYDSEGRFVRADYG----DLSVVSVYHPSG-TSG 127 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K+ W++ F R+A + L L+ GDYNI + D ++P+ ++ F E R Sbjct: 128 DERQAFKMEWLEHFRRYAVELLRTRPKLVLCGDYNICHEAIDIHDPVRNATNSGFLPEER 187 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + + N GF D R H Y++W Y +S +KNKG RID+ M S +L AR Sbjct: 188 EWMTRFLNEGFIDTFRLLHPDSREYTWWSYRFNSRAKNKGWRIDYCMASEAVRPMLKEAR 247 Query: 241 IDTKPRGWTKPSDHTPVIVSL 261 I SDH P+++ L Sbjct: 248 ILNDA----VHSDHCPMMLEL 264 >gi|290893090|ref|ZP_06556079.1| exodeoxyribonuclease [Listeria monocytogenes FSL J2-071] gi|290557450|gb|EFD90975.1| exodeoxyribonuclease [Listeria monocytogenes FSL J2-071] Length = 251 Score = 195 bits (495), Expect = 6e-48, Method: Composition-based stats. Identities = 65/262 (24%), Positives = 112/262 (42%), Gaps = 13/262 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + +E + DI CLQETK ++ + +Y + Sbjct: 1 MKLISWNVNGLRAAVKKGFLEYFEEVDSDIFCLQETKLQEGQIELDLPAYKDY-WNYAVK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +P+ + L + D + R I F + Sbjct: 60 KGYSGTAIFTKVEPLSVQYGLGVPEHDTEGRVITLEFEEFFMVTVYTPNSQAELKRLDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + + L+ +P++ GD N+ + D NP +A F+ E R Sbjct: 120 M------TFEDAILEYVKNLDKTKPVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F + GF D+ R + YS+W Y ++ ++N G RID+ ++S L A+I Sbjct: 174 FSAFLDAGFIDSFRYFYPDLTDAYSWWSYRMNARARNTGWRIDYFVVSERLKDKLVDAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 G SDH PV + L++ Sbjct: 234 HADVLG----SDHCPVELELNL 251 >gi|115525646|ref|YP_782557.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris BisA53] gi|115519593|gb|ABJ07577.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris BisA53] Length = 256 Score = 195 bits (495), Expect = 6e-48, Method: Composition-based stats. Identities = 95/259 (36%), Positives = 139/259 (53%), Gaps = 3/259 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+N+N+I R+ +L AW+K PD +CLQE KTE FP + L+ Y GQK Sbjct: 1 MKIATFNINNINNRLPSLLAWLKSAKPDAVCLQELKTEQHKFPEKALRDAGYSAVWVGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 S+NGVAILSK P+ ++ + I LY P+GNP K Sbjct: 61 SWNGVAILSKKNPVVVIR---TRLPGDPTDSEARYVEGAVGGVVIACLYAPNGNPQPGPK 117 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 +D K++W+KR + A L+ P++ AGD+N+ P D Y W DA E R ++ Sbjct: 118 FDRKLAWMKRLHKHAGSLLKSGAPVVIAGDFNVAPTELDIYPTKSWNKDALIQPESRNAY 177 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 KL G+TDAIR+ H +YSFW Y+ + + ++ G+R+DH++LSP+ L A +D Sbjct: 178 AKLVGQGWTDAIRSLHPEQRIYSFWTYWRNRFERDDGLRLDHLLLSPDVAPRLVKAGVDR 237 Query: 244 KPRGWTKPSDHTPVIVSLD 262 R SDH PV + L Sbjct: 238 AVRARDGASDHAPVWIVLK 256 >gi|110801105|ref|YP_695823.1| exodeoxyribonuclease III [Clostridium perfringens ATCC 13124] gi|110675752|gb|ABG84739.1| exodeoxyribonuclease III [Clostridium perfringens ATCC 13124] Length = 250 Score = 195 bits (495), Expect = 7e-48, Method: Composition-based stats. Identities = 67/256 (26%), Positives = 113/256 (44%), Gaps = 13/256 (5%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + K + DI CLQETK ++ + L+ + + Sbjct: 1 MKLISWNVNGLRACVKKGFLDYFKSEDADIFCLQETKLQEGQIDLD-LEGYFQYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +P+ + + + D + R I F + Sbjct: 60 KGYSGTAIFTKKEPLNVYYGINMEHHDKEGRVITLEFED-----LFMVTVYTPNSQSELA 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + ++ W F + + L ++ ++ GD N+ + D NP +A FT E R Sbjct: 115 RLEYRMEWEDDFRNYLLE-LSSKKGVVVCGDLNVAHKEIDLKNPKTNRKNAGFTDEERDK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F L + GF D R + +YS+W Y ++ N G RID+ ++S + A I Sbjct: 174 FSTLLSSGFIDTFRYFNPDLEGVYSWWSYRFNARKNNAGWRIDYFLVSNNLEDRIKEASI 233 Query: 242 DTKPRGWTKPSDHTPV 257 DT+ G SDH PV Sbjct: 234 DTEILG----SDHCPV 245 >gi|225175437|ref|ZP_03729432.1| exodeoxyribonuclease III Xth [Dethiobacter alkaliphilus AHT 1] gi|225169189|gb|EEG77988.1| exodeoxyribonuclease III Xth [Dethiobacter alkaliphilus AHT 1] Length = 260 Score = 195 bits (495), Expect = 7e-48, Method: Composition-based stats. Identities = 86/264 (32%), Positives = 139/264 (52%), Gaps = 8/264 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKE--NNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + T+NVNS+RAR L W+++ + D++CLQE K D FP + +SL Y G Sbjct: 1 MKICTFNVNSVRAREELLLKWLEKRGTDIDVLCLQEIKVTDDKFPRQAFESLGYQCTVFG 60 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 Q+ YNGVA+ SK ++VT ++ D Q R + + + N+Y PHG+ S Sbjct: 61 QQRYNGVAVCSKEGAQQVVTGFGDENWDQQKRIMHCRIG----EVTVVNVYAPHGDLRGS 116 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 KY K W + FL + + +PL+ GD N+ + D ++P + E+ C E R+ Sbjct: 117 EKYIYKQKWYRYFLEYLQRNFSPSDPLVVVGDLNVALEDLDVHDPKLLEDTVCTMPEERR 176 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 Q + + G D+ R + +++WDY + ++KG+RID+I+ S + + Sbjct: 177 WLQDVLDWGLVDSFRHLNPDAQSFTWWDYVGGAIWQDKGMRIDYILCSKPLAEKMAEVEV 236 Query: 242 DTKPRGW--TKPSDHTPVIVSLDI 263 D PR KPSDH PVI+SL++ Sbjct: 237 DLWPRRRRTPKPSDHAPVILSLNL 260 >gi|163750216|ref|ZP_02157458.1| exodeoxyribonuclease III [Shewanella benthica KT99] gi|161330072|gb|EDQ01056.1| exodeoxyribonuclease III [Shewanella benthica KT99] Length = 268 Score = 195 bits (495), Expect = 7e-48, Method: Composition-based stats. Identities = 79/264 (29%), Positives = 128/264 (48%), Gaps = 9/264 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N IRAR+H L A I + PDII LQETK D FP ++++ Y + G K Sbjct: 1 MKIVSFNINGIRARLHQLQALIDAHQPDIIGLQETKAHDDVFPAADVEAMGYKVHYHGGK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLD-VQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121 ++ GVA+LSK +P+++ P D D + I N + L + N Y P G+ ++ Sbjct: 61 AHYGVAMLSKLEPVKVQKGFPTDSEDAQRRMIIATFTQENGRPLTVLNGYFPQGDNVSHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175 TKY K + K + + ++ +E + GD NI P + F Sbjct: 121 TKYPAKRQFYKDLMTYLNENHTPDEDIAIIGDINISPVDLDIGIGEPNAKRWLRTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 +E R+ + L + G D R H YS++DY + + N+G+RID ++ + Sbjct: 181 QVEEREWLKTLMDWGLLDTFRELHPQRTERYSWFDYRSKGFVDNRGLRIDVVLATKSLNE 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVI 258 L + +D R KPSDH P+ Sbjct: 241 RLVESDVDYDLRAIEKPSDHAPIW 264 >gi|124025252|ref|YP_001014368.1| exodeoxyribonuclease III [Prochlorococcus marinus str. NATL1A] gi|123960320|gb|ABM75103.1| exodeoxyribonuclease III [Prochlorococcus marinus str. NATL1A] Length = 275 Score = 195 bits (495), Expect = 7e-48, Method: Composition-based stats. Identities = 96/272 (35%), Positives = 142/272 (52%), Gaps = 4/272 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + VATWNVNSIR+RI ++ W+ N DI+CLQETKTEDK FP E L Y + GQK Sbjct: 1 MLVATWNVNSIRSRIDHVKEWLITNKIDILCLQETKTEDKFFPIENFSDLGYEVSISGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT----INTQTLRIGNLYLPHGNPI 119 SYNGVAI+S++ I D Q I + + +RI N+Y+P+G+ I Sbjct: 61 SYNGVAIISRFPINNIKIGFNEVINDYQDLSILSEQKRIISADINDIRIINVYVPNGSSI 120 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 S K+ K W++ + + + P+ GD+NI P+ D + P +E + + Sbjct: 121 NSDKFIYKKKWLECLQVYLREINKNNTPICLLGDFNIAPEDRDIHTPSRYEESIMASSKE 180 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R+ + D R +S+WDY +W ++KG RIDHI L+ + S +S Sbjct: 181 RELLKDALGGELEDVFRIFEPGEKNWSWWDYRHSAWERDKGWRIDHIYLTEDILSCANSC 240 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271 ID + R KPSDH PV+V ++ P + + Sbjct: 241 WIDKEQRSREKPSDHAPVVVDINWPPSDIENE 272 >gi|326384218|ref|ZP_08205900.1| exodeoxyribonuclease III Xth [Gordonia neofelifaecis NRRL B-59395] gi|326197083|gb|EGD54275.1| exodeoxyribonuclease III Xth [Gordonia neofelifaecis NRRL B-59395] Length = 294 Score = 195 bits (495), Expect = 7e-48, Method: Composition-based stats. Identities = 81/292 (27%), Positives = 140/292 (47%), Gaps = 18/292 (6%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFE---TLQSLNYHIETC 60 + +ATWNVNS++ R+ L W+ + PD++CLQETK D+ F E L + Y Sbjct: 1 MRLATWNVNSVKQRVPRLLPWLDDRQPDVVCLQETKVSDEAFAAELGDELAARGYEFAHA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT--LRIGNLYLPHGNP 118 GQ +NGVA+LS+ ++ P ++ +R+ ++Y+P+G Sbjct: 61 GQGQWNGVALLSRVGLDDVRVAFPDAPGFPDTTGEPEGRAVSAVCDGVRVYSVYVPNGRE 120 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + S Y+ K++W+++ + + GDYNIIP DC++P + T Sbjct: 121 VDSDHYNYKLNWLEKLRLAVEPDADT---TVICGDYNIIPTDADCFDPEAFVGHTHVTPA 177 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R++F+ L+ +G D +R +Y++WDY A + K+ G+RID ++ + Sbjct: 178 EREAFEALKALGLHDVMRDHWPDKQIYTYWDYRAGMFHKDLGMRIDFLLAGGSVAERAKA 237 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIP----------EPRKKQQDSTSQNMKP 280 + +D + R TKPSDH PV + LD+ P + + + P Sbjct: 238 SWVDRQARKGTKPSDHAPVFLDLDVAPDGDVGPVVPPPSRPSKPAAGSVKLP 289 >gi|109639337|gb|ABG36534.1| exodeoxyribonuclease III [Haemophilus ducreyi] Length = 267 Score = 195 bits (495), Expect = 7e-48, Method: Composition-based stats. Identities = 85/267 (31%), Positives = 126/267 (47%), Gaps = 8/267 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A I ++ PD+I LQE K D++FP + ++ L YH+ GQK Sbjct: 1 MKFISFNINGLRARPHQLEAIINKHQPDVIGLQEIKVADEDFPHQLVEHLGYHVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122 + GVA+L+K QP+ I P D D Q R I A + L + N Y P G T Sbjct: 61 GHYGVALLTKKQPLTIRKGFPNDTADAQKRMIMAEINTDFGILTVLNGYFPQGENRQHET 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + + L + P+I GD NI + E F Sbjct: 121 KFSAKAKFYADLQHYLETTLTADNPIIIMGDMNICSTDLDIGIGEANRKRWLREGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +L + G D RA H T +S++DY + ++ N+G+RID I+ S + Sbjct: 181 PEEREWLNRLYHYGLVDTFRAMHPTTTDQFSWFDYRSKGFNDNRGLRIDLILASTTLANH 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262 ID + R KPSDH P+ Sbjct: 241 CVETGIDLEIRAMEKPSDHAPIWAVFK 267 >gi|224539496|ref|ZP_03680035.1| hypothetical protein BACCELL_04401 [Bacteroides cellulosilyticus DSM 14838] gi|224518891|gb|EEF87996.1| hypothetical protein BACCELL_04401 [Bacteroides cellulosilyticus DSM 14838] Length = 254 Score = 195 bits (495), Expect = 7e-48, Method: Composition-based stats. Identities = 81/262 (30%), Positives = 139/262 (53%), Gaps = 12/262 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60 + + T+NVN +RA + L W+++ D++C+QETK + +P E L +L Y ++ + Sbjct: 1 MKIITYNVNGLRAAVSKGLPEWLEQEQADVVCIQETKLQPDQYPEEALSTLGYKHYLYSA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GVAIL+K +P + + ++ D + RFI A F + + ++Y P G Sbjct: 61 QKKGYSGVAILTKKEPDHVEYGMGIEEYDNEGRFIRADFG----DISVVSVYHPSG-TSG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K+ W+++F + ++ + LI GDYNI +P D ++PI ++ F E R Sbjct: 116 DERQAFKMVWLEKFQEYVTELRKSRPKLILCGDYNICHEPIDIHDPIRNATNSGFLPEER 175 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + + N GF D R H Y++W Y +S +KNKG RID+ M++ LL AR Sbjct: 176 EWMTRFLNAGFIDTFRLLHPEQQEYTWWSYRFNSRAKNKGWRIDYCMVTEPVRPLLKEAR 235 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I SDH P+++ ++ Sbjct: 236 ILNDA----VHSDHCPMLLDIE 253 >gi|28211273|ref|NP_782217.1| exodeoxyribonuclease III [Clostridium tetani E88] gi|28203713|gb|AAO36154.1| exodeoxyribonuclease III [Clostridium tetani E88] Length = 260 Score = 195 bits (494), Expect = 7e-48, Method: Composition-based stats. Identities = 75/266 (28%), Positives = 120/266 (45%), Gaps = 12/266 (4%) Query: 1 MSVVTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HI 57 M + + +WNVN +RA N W++E PD+ CLQETK +D Y + Sbjct: 1 MIKMRIFSWNVNGLRAIAKKNFFKWVEEEKPDVFCLQETKIQDHQLEDNLKNIEGYKSYF 60 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 +K Y+GVA +K +P ++ + ++ D + R + + F + N+Y P+G Sbjct: 61 SFAEKKGYSGVATYTKTEPKSVLNGIGIEEFDNEGRVLISEFE----EFTLLNIYFPNGQ 116 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 D K+ + L + + + + LI GDYN + D NP E + F Sbjct: 117 MNDER-LDYKLRFYDAILDYCNDLVSKGKKLIICGDYNTAHREIDLKNPKNNEKYSGFLP 175 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 R+ K N G+ D R + YS+W Y + +N G RID+ +S L+ Sbjct: 176 IEREWIDKFINNGYVDVYRNFYPEKVEYSWWSYRFKARERNAGWRIDYFFVSDNVLPLIK 235 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263 +I T+ G SDH P+ + LDI Sbjct: 236 DTKIHTEVLG----SDHCPIELILDI 257 >gi|33152736|ref|NP_874089.1| exonuclease III [Haemophilus ducreyi 35000HP] gi|1388153|gb|AAB49625.1| exonuclease III [Haemophilus ducreyi] gi|33148960|gb|AAP96478.1| exodeoxyribonuclease III [Haemophilus ducreyi 35000HP] Length = 267 Score = 195 bits (494), Expect = 7e-48, Method: Composition-based stats. Identities = 85/267 (31%), Positives = 125/267 (46%), Gaps = 8/267 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A I ++ PD+I LQE K D++FP + ++ L YH+ GQK Sbjct: 1 MKFISFNINGLRARPHQLEAIINKHQPDVIGLQEIKVADEDFPHQLVEHLGYHVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122 + GVA+L+K QP+ I P D D Q R I A + L + N Y P G T Sbjct: 61 GHYGVALLTKKQPLTIRKGFPNDTADAQKRMIMAEINTDFGILTVLNGYFPQGENRQHET 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 K+ K + + L P+I GD NI + E F Sbjct: 121 KFPAKAKFYADLQHYLETALTAYNPIIIMGDMNICSTDLDIGIGEANRKRWLREGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ +L + G D RA H T +S++DY + ++ N+G+RID I+ S + Sbjct: 181 PEEREWLDRLYHYGLVDTFRAMHPTTTDQFSWFDYRSKGFNDNRGLRIDLILASTTLANH 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262 ID + R KPSDH P+ Sbjct: 241 CVETGIDLEIRAMEKPSDHAPIWAVFK 267 >gi|325915362|ref|ZP_08177679.1| Exodeoxyribonuclease III [Xanthomonas vesicatoria ATCC 35937] gi|325538409|gb|EGD10088.1| Exodeoxyribonuclease III [Xanthomonas vesicatoria ATCC 35937] Length = 346 Score = 195 bits (494), Expect = 8e-48, Method: Composition-based stats. Identities = 95/262 (36%), Positives = 153/262 (58%), Gaps = 5/262 (1%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64 +AT+NVN I +R+ +L W+ PDI+ LQE K + FP + ++ Y + GQ++ Sbjct: 7 KIATYNVNGIGSRLSHLLEWLTREQPDIVGLQELKATQEAFPEQAIRDAGYGVIWQGQRA 66 Query: 65 YNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVA+L++ PIEI LP D D Q+R++EA + + LYLP+GNP K Sbjct: 67 WNGVALLARGTDPIEIRRGLPWDPSDTQSRYLEAAI----HGVVVACLYLPNGNPQPGPK 122 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 +D K++W +R +R A + L P+ GD+N++P D Y+P W DA E RQ++ Sbjct: 123 FDYKLAWFQRLIRHAKTLVGLPHPVALIGDFNVVPTDADIYDPKGWRKDALLQPESRQAY 182 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q L G+TD++ A + +Y+FWDY+ +++++G+RIDH++L+ L A +D Sbjct: 183 QTLVEQGWTDSLLAVYGDAPIYTFWDYFRQHFARDRGLRIDHLLLNRALAPGLLDAGVDK 242 Query: 244 KPRGWTKPSDHTPVIVSLDIPE 265 R K SDH P +S+ +P+ Sbjct: 243 WVRALEKASDHAPTWISVRVPD 264 >gi|119945063|ref|YP_942743.1| exodeoxyribonuclease III [Psychromonas ingrahamii 37] gi|119863667|gb|ABM03144.1| Exodeoxyribonuclease III [Psychromonas ingrahamii 37] Length = 269 Score = 195 bits (494), Expect = 8e-48, Method: Composition-based stats. Identities = 77/267 (28%), Positives = 123/267 (46%), Gaps = 9/267 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V ++N+N +RAR+H L A I ++ PD+I LQE K + FP ++++ YH+ GQK Sbjct: 1 MKVISFNINGLRARLHQLQAIIDKHQPDVIGLQEIKVHNDVFPVADVEAMGYHVYFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLD-VQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121 + GVA+L K + +++ P DD + + + +RI N Y P G Sbjct: 61 GHYGVAMLCKNKALDVQYGFPTDDEEAQRRMIMVTVQDKAGLPVRILNGYFPQGESQNHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175 TKY K + + + ++ E+ LI GD NI D + F Sbjct: 121 TKYPAKRKFYQDLNIYLNEYHTAEDQLIVMGDINISRLDLDIGIGEVNAKRWLQTKKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R+ KL + G D R + YS++DY + + N+G+RID I+ + + Sbjct: 181 LPEEREWLAKLMDFGLIDTFRLLNPEVSDQYSWFDYRSRGFDDNRGLRIDVILATETLAN 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261 ID + R KPSDH P+ Sbjct: 241 KTIDTGIDYELRAIEKPSDHAPIWTEF 267 >gi|17546312|ref|NP_519714.1| exodeoxyribonuclease III protein [Ralstonia solanacearum GMI1000] gi|17428609|emb|CAD15295.1| probable exodeoxyribonuclease III protein [Ralstonia solanacearum GMI1000] Length = 269 Score = 195 bits (494), Expect = 8e-48, Method: Composition-based stats. Identities = 94/266 (35%), Positives = 141/266 (53%), Gaps = 8/266 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPD-----IICLQETKTEDKNFPFETLQSLNYHIE 58 + VATWNVNS++ R+ ++ W+ E D ++CLQE K D +P L++ Y Sbjct: 1 MRVATWNVNSLKVRLPHVLQWLGEREADATPIDLLCLQELKLPDDRYPLAELEAAGYASL 60 Query: 59 TCGQKSYNGVAILSKYQPIEIVTH---LPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 GQK+YNGVAIL++ + D D Q R + AT+ + +R+ + Y P+ Sbjct: 61 FTGQKTYNGVAILARKAAMPEGRDVVRNIPDFADEQQRVVAATYDVAGGPVRVISAYFPN 120 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 G + S K K+ W+ + + L+ GD+NI P D ++P WE Sbjct: 121 GQALDSDKMVYKMRWLAALQDWLQAEMAAHPRLMLLGDFNIAPDDRDVHDPKKWEGMNLV 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 + E R +F+ L++ G DA R L+S+WDY ++ +N G+RIDHI+LSP L Sbjct: 181 SPEERAAFRALESAGLVDAFRMFEQEDKLFSWWDYRLFAFRRNAGLRIDHILLSPNLARL 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 S ID PRGW +PSDHTPV+ +L Sbjct: 241 CESCHIDRVPRGWEQPSDHTPVVAAL 266 >gi|21231446|ref|NP_637363.1| exodeoxyribonuclease III [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66768500|ref|YP_243262.1| exodeoxyribonuclease III [Xanthomonas campestris pv. campestris str. 8004] gi|21113117|gb|AAM41287.1| exodeoxyribonuclease III [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66573832|gb|AAY49242.1| exodeoxyribonuclease III [Xanthomonas campestris pv. campestris str. 8004] Length = 356 Score = 195 bits (494), Expect = 9e-48, Method: Composition-based stats. Identities = 95/262 (36%), Positives = 158/262 (60%), Gaps = 5/262 (1%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64 T+AT+NVN I +R+ +L W++ PDI+ LQE K+ + FP + ++ Y + GQ+S Sbjct: 7 TIATYNVNGIASRLPHLLQWLQREQPDIVGLQELKSTQEAFPEQAIRDAGYGVIWQGQRS 66 Query: 65 YNGVAILSKY-QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVA+L++ +P+EI LP D D Q+R++EA + +G LYLP+GNP K Sbjct: 67 WNGVALLARGAEPVEIRRGLPWDPADTQSRYLEAAI----HGVIVGCLYLPNGNPQPGPK 122 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 +D K+ W +R LR A+ + L P+ GD+N++P Y+P W DA E R ++ Sbjct: 123 FDYKLKWFQRLLRHAATLVALPHPVALIGDFNVVPTDAHIYDPKGWRKDALLQPESRAAY 182 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +L G+TD+++A H +Y+FWDY+ +++++G+RIDH++L+ + L A + Sbjct: 183 AQLLAQGWTDSLQAIHGDAPVYTFWDYFRQHFARDRGLRIDHLLLNRTLAAGLRDAGVGK 242 Query: 244 KPRGWTKPSDHTPVIVSLDIPE 265 R K SDH P +++D+P+ Sbjct: 243 WVRALEKASDHAPTWITVDVPD 264 >gi|325286008|ref|YP_004261798.1| exodeoxyribonuclease III Xth [Cellulophaga lytica DSM 7489] gi|324321462|gb|ADY28927.1| exodeoxyribonuclease III Xth [Cellulophaga lytica DSM 7489] Length = 254 Score = 195 bits (494), Expect = 9e-48, Method: Composition-based stats. Identities = 79/263 (30%), Positives = 130/263 (49%), Gaps = 14/263 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY---HIET 59 + + ++NVN IRA I W+ +PD+ICLQE K + + Y + + Sbjct: 1 MKIVSYNVNGIRAAINKGFIDWLTATDPDVICLQEIKALKEQLDLSLFEEAGYSYNYWYS 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GVAILSK +P + D +D + R I A F + I ++YLP G + Sbjct: 61 AQKKGYSGVAILSKTEPDNVTYGTGIDYMDFEGRNIRADFG----DISIMSMYLPSGTNL 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 D K+ ++ F ++ ++ + + +I GDYNI + D ++P+ +N + F Sbjct: 117 AR--LDFKLKYMDDFQKYINELKKDKPNIIVVGDYNICHEAIDIHDPVRNKNVSGFLPVE 174 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R+ GF D+ R + H YS+W Y A++ + NKG R+D+ M+S + L A Sbjct: 175 REWIGNFMESGFIDSFRHFNKEPHNYSWWSYRANARNNNKGWRLDYGMVSKTLENRLKRA 234 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 I + K SDH P++V L Sbjct: 235 VILKEA----KHSDHCPILVELK 253 >gi|330808554|ref|YP_004353016.1| Putative exodeoxyribonuclease III [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327376662|gb|AEA68012.1| Putative exodeoxyribonuclease III [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 264 Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats. Identities = 108/262 (41%), Positives = 157/262 (59%), Gaps = 5/262 (1%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 M + +AT+N+N IRAR+ NL W++ PDI CLQE K DK+FP L+S+ Y Sbjct: 1 MKNLRIATFNINGIRARLPNLLEWLEREKPDIACLQELKAVDKDFPAAELESVGYGAIWH 60 Query: 61 GQKSYNGVAILSKY-QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 GQ S+NGVAIL++ QP+E LPG D D +R++EA + +G LYLP+GNP Sbjct: 61 GQASWNGVAILARDAQPLESRRGLPGGDDDNHSRYLEAAV----HGVLVGCLYLPNGNPQ 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K+D K++W +R + +A + P++ AGDYN++P D YNP W DA E Sbjct: 117 PGPKFDYKLAWFERLIDYAQGLQASDHPVVLAGDYNVVPTDMDIYNPRSWLKDALLQPES 176 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R + +L + G+TD++R + +Y+FWDY+ W KN G+RIDH++L+P A++ L A Sbjct: 177 RACYLRLLDQGWTDSLRHLYPDERIYTFWDYFRQHWQKNSGLRIDHLLLNPAASAYLSEA 236 Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261 +D R PSDH P + L Sbjct: 237 GVDAWVRNQPHPSDHAPTWIRL 258 >gi|288941776|ref|YP_003444016.1| exodeoxyribonuclease III [Allochromatium vinosum DSM 180] gi|288897148|gb|ADC62984.1| exodeoxyribonuclease III [Allochromatium vinosum DSM 180] Length = 278 Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats. Identities = 80/274 (29%), Positives = 128/274 (46%), Gaps = 11/274 (4%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 ++ + ++N+N +RAR H + A +PDI+ LQE+K D+ FP + + L Y + GQ Sbjct: 1 MLKIVSFNINGVRARPHQVEALKAGLDPDILALQESKVADEQFPLDWARGLGYDVRIHGQ 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLD-VQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 K + GVA+LSK P +V LP DD + + + + + + N Y P G Sbjct: 61 KGHYGVALLSKQSPHSVVKGLPNDDAEAQRRLILGQYRLADGDEVTVINGYFPQGEGRDH 120 Query: 122 T-KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDAC 174 K+ K + L + ++ ++ GD N+ P D + Sbjct: 121 PLKFPAKQQFYAGLLDYLRTAFRPDQNIVLLGDMNVAPLDLDIGIGADNAKRWLRTGKCA 180 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSK--NKGIRIDHIMLSPE 231 F E R+ FQ L + G DA R H +S++DY + + + G+RIDHI++S Sbjct: 181 FLPEEREWFQALLDWGLIDAYRTRHPETADRFSWFDYRSRGFEREPKHGLRIDHILISAP 240 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 L ID R KPSDH PV ++LD+ + Sbjct: 241 LRERLIDVGIDYAIRAMDKPSDHCPVWITLDLAD 274 >gi|330719976|gb|EGG98428.1| Exodeoxyribonuclease III [gamma proteobacterium IMCC2047] Length = 271 Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats. Identities = 75/271 (27%), Positives = 127/271 (46%), Gaps = 11/271 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N IRARI L A I + PD+I LQE+K D +FP E + ++ Y + GQK Sbjct: 1 MKIISFNINGIRARIPQLQAIIDHHQPDVIGLQESKVNDPDFPVEAINNMGYAVNYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLP--GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 S+ GVA+LS+ +P I P G+D + + + + + + Sbjct: 61 SHYGVAMLSRMEPKAIQKGWPDDGEDAQRRMIIGQFECSDGGLITVLNGYFPQGESNKHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175 TK+ K + + + + ++ GD+NI P +D + F Sbjct: 121 TKFPAKRKFYADLMNYLETHHTPSDRVVVMGDFNISPTDNDIGIGEKNAKRWLQTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232 E R+ + +L G D+ R + + YS++DY + + +G+RIDHI+++ Sbjct: 181 LPEEREWYDRLLAWGLLDSFRIQNPEVNDRYSWFDYRSKGFDDTPKRGLRIDHILITQPL 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 L ID + R KPSDH PV SL++ Sbjct: 241 VEHLADTGIDYEARAMEKPSDHCPVWASLNL 271 >gi|119953317|ref|YP_945526.1| exodeoxyribonuclease III [Borrelia turicatae 91E135] gi|119862088|gb|AAX17856.1| exodeoxyribonuclease III [Borrelia turicatae 91E135] Length = 252 Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats. Identities = 61/260 (23%), Positives = 106/260 (40%), Gaps = 9/260 (3%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN IRA +I++ NPD++CLQETK + P E + Y+ Sbjct: 1 MNLISWNVNGIRAIFGKGFLEFIEKYNPDVLCLQETKAFKEQLPKELINIEGYYSYF--- 57 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 S + + S V + ++++++ E I I + Sbjct: 58 -SKSIIKGYSGVGLYSKVKPIKLENMNMEIFDREGRCLIAHYRDFILINAYFPNSQSLRK 116 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + K+ ++ A+ + + ++ GD+NI D NP A F +E Sbjct: 117 RLPYKLEFLMSLESIANMFVTSGKNIVICGDFNIAHTEIDLANPKTSRESAGFYIEETTW 176 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 N G+ D R + Y++WDY + +N G RID+ +++ S + A I Sbjct: 177 MDNFLNGGYVDTFRMFNMDPGNYTWWDYKTRARERNIGWRIDYFIVNEFFKSKVKDALIL 236 Query: 243 TKPRGWTKPSDHTPVIVSLD 262 + G SDH PV + L Sbjct: 237 REVMG----SDHCPVFLELK 252 >gi|300691333|ref|YP_003752328.1| exodeoxyribonuclease III [Ralstonia solanacearum PSI07] gi|299078393|emb|CBJ51043.1| EXODEOXYRIBONUCLEASE III [Ralstonia solanacearum PSI07] Length = 269 Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats. Identities = 92/266 (34%), Positives = 140/266 (52%), Gaps = 8/266 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPD-----IICLQETKTEDKNFPFETLQSLNYHIE 58 + VATWNVNS++ R+ ++ W+ E D ++CLQE K D +P L + Y Sbjct: 1 MRVATWNVNSLKVRLPHVLQWLGEREADATPIDLLCLQELKLPDDRYPLAELDAAGYASL 60 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDV---QARFIEATFTINTQTLRIGNLYLPH 115 GQK+YNGVAIL++ + + + Q R + AT+ + +R+ + Y P+ Sbjct: 61 FTGQKTYNGVAILARKAAMPEGRDVVKNIPGFADEQQRIVAATYDVAGGPVRVISAYFPN 120 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 G + S K K+ W+ + + L+ GD+NI P D ++P WE Sbjct: 121 GQALDSDKMVYKMRWLAALQDWLKAEMAAHPRLMLLGDFNIAPDDRDVHDPKKWEGMNLV 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 + E R +F+ L+ G DA R L+S+WDY ++ +N G+RIDHI+LSP+ L Sbjct: 181 SPEERAAFRALEGAGLVDAFRMFDQADKLFSWWDYRLFAFKRNAGLRIDHILLSPDLARL 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 S ID PRGW +PSDHTPV+ +L Sbjct: 241 CESCHIDRVPRGWEQPSDHTPVVAAL 266 >gi|51246268|ref|YP_066152.1| exodeoxyribonuclease (ExoA) [Desulfotalea psychrophila LSv54] gi|50877305|emb|CAG37145.1| probable exodeoxyribonuclease (ExoA) [Desulfotalea psychrophila LSv54] Length = 480 Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats. Identities = 72/261 (27%), Positives = 113/261 (43%), Gaps = 13/261 (4%) Query: 5 TVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETCG 61 +WNVN IRA ++E NPD+I LQETK + + Y + + Sbjct: 229 RYISWNVNGIRAVEKKGFIDIVQELNPDVIGLQETKAQPEQLSESLKNIPGYTSYWYSAQ 288 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+GVA SK++P++++ + ++ D + R I F + + Sbjct: 289 RKGYSGVAFYSKHEPLQVIYGIGAEEFDCEGRVITLEFADHYLATIYFPNSADQLKRLDY 348 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 R L Q+LE E+ +I GD+N+ + D NP +A FT E R Sbjct: 349 KL------RFNRALLAFFQKLEKEKAVILCGDFNVAHKEIDLKNPKSNVKNAGFTPEERA 402 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 + G+TD R + YS+W Y + SKN G RID+ +S + +A I Sbjct: 403 WMDEFLEAGYTDTFRLFNQDPENYSWWSYRFSARSKNIGWRIDYFCVSENGQKRIVNAEI 462 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 + G SDH PV++ Sbjct: 463 LPEVMG----SDHCPVLLDFK 479 >gi|21242774|ref|NP_642356.1| exodeoxyribonuclease III [Xanthomonas axonopodis pv. citri str. 306] gi|21108255|gb|AAM36892.1| exodeoxyribonuclease III [Xanthomonas axonopodis pv. citri str. 306] Length = 330 Score = 194 bits (493), Expect = 1e-47, Method: Composition-based stats. Identities = 97/276 (35%), Positives = 160/276 (57%), Gaps = 5/276 (1%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64 +AT+NVN I +R+ +L W++ + PDI+ LQE K+ FP + ++ Y + G+KS Sbjct: 7 KIATFNVNGIASRLPHLLEWLQRDQPDIVGLQELKSTQVAFPEQAIRDAGYGVIWQGEKS 66 Query: 65 YNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVA+L++ +P+EI LP D D Q+R++EA + + LYLP+GNP K Sbjct: 67 WNGVALLARGIEPVEIRRGLPWDPRDTQSRYLEAAI----HGVVVACLYLPNGNPQPGPK 122 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 +D K++W +R +R A ++L P+ GD+N++P D Y+P W DA E R ++ Sbjct: 123 FDYKLAWFERLIRHAKTLVDLPHPVALIGDFNVVPTDADIYDPKGWRKDALLQPESRAAY 182 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q L G+TD++ A H +Y+FWDY+ +++++G+RIDH++L+ L A +D Sbjct: 183 QTLLAQGWTDSLLAIHGQTPIYTFWDYFRQHFARDRGLRIDHLLLNRTLAPGLQDAGVDK 242 Query: 244 KPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMK 279 R K SDH P +S+ +P+ + T+ K Sbjct: 243 WVRALEKASDHAPTWISVRVPDAPAEAAPDTTPMAK 278 >gi|291546831|emb|CBL19939.1| exodeoxyribonuclease III [Ruminococcus sp. SR1/5] Length = 251 Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats. Identities = 71/262 (27%), Positives = 109/262 (41%), Gaps = 13/262 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN IRA I E + DI CLQETK + E L + + + Sbjct: 1 MKFISWNVNGIRACITKGFEERFHELDADIFCLQETKCQQGQVKLE-LPGYHQYWNYANR 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 + Y+G AI +K +P+ + ++ D + R I F + Sbjct: 60 RGYSGTAIFTKREPLSAAYGIGIEEHDKEGRVITLEFDEYYFVTVYTPNSQSELRRLEYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + +L+ ++P+I GD N+ Q D NP +A FT E R Sbjct: 120 M------KWEEDFLAYLLKLQEKKPVICCGDLNVAHQEIDLKNPKTNRKNAGFTDEERAC 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F + GF D R + +YS+W Y + KN G RID+ ++SP L A+I Sbjct: 174 FTRALESGFIDTFRYFYPDKEGVYSWWSYRFRAREKNAGWRIDYFLVSPSLKEKLQDAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 + G SDH PV + +D+ Sbjct: 234 HGEIMG----SDHCPVELDIDL 251 >gi|315303668|ref|ZP_07874193.1| exodeoxyribonuclease III [Listeria ivanovii FSL F6-596] gi|313627958|gb|EFR96566.1| exodeoxyribonuclease III [Listeria ivanovii FSL F6-596] Length = 251 Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats. Identities = 65/262 (24%), Positives = 110/262 (41%), Gaps = 13/262 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + + DI CLQETK + + L + + Sbjct: 1 MKLISWNVNGLRAVVKKGFLEYFDSVDADIFCLQETKLQAGQIDLD-LPGYKDYWNYAVK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +P+ + L ++ D + R I F + Sbjct: 60 KGYSGTAIFTKKEPLSVQYGLGIEEHDTEGRVITLEFENFFMVTVYTPNSQAELKRLDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + ++L+ +P+I GD N+ + D NP +A F+ E R Sbjct: 120 M------TFEDAILAYVKKLDETKPVILCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F GF D+ R + YS+W Y ++ ++N G RID+ ++S L A+I Sbjct: 174 FTAFLEAGFVDSFRYFYPDLEDAYSWWSYRMNARARNTGWRIDYFVVSERLKDNLVDAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 G SDH PV + L++ Sbjct: 234 HPDVLG----SDHCPVELELNV 251 >gi|146298594|ref|YP_001193185.1| exodeoxyribonuclease III Xth [Flavobacterium johnsoniae UW101] gi|146153012|gb|ABQ03866.1| exodeoxyribonuclease III Xth [Flavobacterium johnsoniae UW101] Length = 253 Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats. Identities = 81/263 (30%), Positives = 124/263 (47%), Gaps = 14/263 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY---HIET 59 + + ++NVN IRA I W++ +PD+ICLQE K P E + + Y + Sbjct: 1 MKIISYNVNGIRAAITKGFIEWLQAASPDVICLQEIKATQDQIPVEAITAAGYPYQYYYP 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GVAILSK +P ++V +D + R + A F + + +LYLP G I Sbjct: 61 ATKKGYSGVAILSKIEPQKVVYGTGIHHMDFEGRNLRADFD----DVSVMSLYLPSGTNI 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 D K ++ F + ++ LI GDYNI + D ++P+ + + F E Sbjct: 117 DR--LDHKFMFMDDFQTYINELKISIPNLIICGDYNICHEAIDIHDPVRNKTVSGFLPEE 174 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R GF D+ R + H YS+W Y A + NKG RID+ ++S L A Sbjct: 175 RAWLDAFMKSGFIDSFRHFNKDPHHYSWWSYRAGARGNNKGWRIDYNLVSNAIEHRLKRA 234 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 I SDH PV+V ++ Sbjct: 235 VILPDA----VHSDHCPVLVEIE 253 >gi|190571508|ref|YP_001975866.1| exodeoxyribonuclease III [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213018910|ref|ZP_03334718.1| exodeoxyribonuclease III [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|190357780|emb|CAQ55235.1| exodeoxyribonuclease III [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212995861|gb|EEB56501.1| exodeoxyribonuclease III [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 260 Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats. Identities = 88/260 (33%), Positives = 146/260 (56%), Gaps = 1/260 (0%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 ++ +ATWNVNSIR RI+ L ++I ++ DI+ LQE K ++ FP+ ++ L Y GQ Sbjct: 1 MLKIATWNVNSIRKRINQLCSFIVDSQIDIVLLQEIKCTEEQFPYAEIEKLGYEYAVYGQ 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 + NGV +LSKY +E + + + +AR+IE + +R+G++Y+P+G S Sbjct: 61 VARNGVCVLSKYPILEKLK-IDIVESHQEARYIECVIKHSNNKVRVGSVYVPNGQSPDSH 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 ++ K+ + L+ EE I AGDYN+ D ++ + CF ++ R+ Sbjct: 120 TFEYKLKFFDNLYERMGTLLKNEELTIIAGDYNVALDEIDVFDSNLLNGQVCFHIKEREK 179 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 + + N+GF DA R +H +++W Y +S N+G+RIDH++LSP+A L + ID Sbjct: 180 LRAILNLGFKDAFRISHLNLQQFTWWHYQGNSLRNNQGMRIDHMLLSPQAADKLETCYID 239 Query: 243 TKPRGWTKPSDHTPVIVSLD 262 + R PSDHTPV+ + Sbjct: 240 DRLRKLENPSDHTPVVCVIK 259 >gi|301062581|ref|ZP_07203216.1| exodeoxyribonuclease III [delta proteobacterium NaphS2] gi|300443317|gb|EFK07447.1| exodeoxyribonuclease III [delta proteobacterium NaphS2] Length = 256 Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats. Identities = 82/261 (31%), Positives = 130/261 (49%), Gaps = 6/261 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + AT+N NS+RAR+ L W++ PD++C+QETK +DK+FP + + YH GQK Sbjct: 1 MKFATFNANSLRARLPILLDWLEREEPDVLCIQETKVQDKDFPVKPFEGAGYHAAFKGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 SYNGVAI+SK +L + + I + + P G + + K Sbjct: 61 SYNGVAIVSKSPLEAPRLNLFDEGDEQARFISGIIGGIPIVNVYV-----PQGFQVGTEK 115 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ W+K + R + + PL+ AGD+N+ D Y+P + + F E + Sbjct: 116 FQYKLGWLKSLYDHIAGRYDPDAPLLVAGDFNVALDDRDVYDPDGFRDGVGFHPEEQALM 175 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYY-ADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 + G D R Y+FWDY + + +N G RID+I+ + T + ID Sbjct: 176 KMFFQWGLVDIFRQHVSEPQQYTFWDYRIPNGFKRNMGWRIDYILGTKPLTEKSTAIWID 235 Query: 243 TKPRGWTKPSDHTPVIVSLDI 263 + RG KPSDHT +++SL + Sbjct: 236 NQSRGLKKPSDHTFLVMSLAV 256 >gi|289665987|ref|ZP_06487568.1| exodeoxyribonuclease III [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289670449|ref|ZP_06491524.1| exodeoxyribonuclease III [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 329 Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats. Identities = 95/267 (35%), Positives = 157/267 (58%), Gaps = 5/267 (1%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64 +AT+NVN I +R+ +L W++ PDI+ LQE K+ FP + ++ Y + G+KS Sbjct: 7 KIATFNVNGITSRLSHLLEWLQREQPDIVGLQELKSTQAAFPEQAIRDAGYGVIWQGEKS 66 Query: 65 YNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVA+L++ +P+EI LP D D Q+R++EA + + LYLP+GNP K Sbjct: 67 WNGVALLARGTEPVEIRRGLPWDPGDTQSRYLEAAI----HGVVVACLYLPNGNPQPGPK 122 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 +D K++W +R +R A ++L P+ GD+N++P D Y+P W DA E R ++ Sbjct: 123 FDYKLAWFERLIRHAKTLVDLPHPVALIGDFNVVPTDADIYDPKGWRKDALLQPESRAAY 182 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 Q L G+TD++ A H +Y+FWDY+ +++++G+RIDH++L+ + L A ++ Sbjct: 183 QTLLAQGWTDSLLAMHGATPIYTFWDYFRQHFARDRGLRIDHLLLNRKLAPGLQDAGVNK 242 Query: 244 KPRGWTKPSDHTPVIVSLDIPEPRKKQ 270 R K SDH P +S+ +P+ K Sbjct: 243 WVRALEKASDHAPTWISVHVPDAPGKA 269 >gi|154502978|ref|ZP_02040038.1| hypothetical protein RUMGNA_00800 [Ruminococcus gnavus ATCC 29149] gi|153796517|gb|EDN78937.1| hypothetical protein RUMGNA_00800 [Ruminococcus gnavus ATCC 29149] Length = 250 Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats. Identities = 77/261 (29%), Positives = 123/261 (47%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN IRA + + +E + DI CLQETK + + L+ + + Sbjct: 1 MKLISWNVNGIRACVQKGFLEFFREADADIFCLQETKLQAGQIELD-LEGYEQYWNYAVK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G A+ +K +P+ + + ++ D + R I F +Y P+ + Sbjct: 60 KGYSGTAVFTKKKPLNVTYGIGIEEHDQEGRVITLEFE----EFYFVTVYTPNSQNELAR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 D ++ W FL + + LE E+P+IF GD N+ + D NP +A FT E R Sbjct: 116 -LDYRMKWESDFLAYLKK-LEEEKPVIFCGDLNVAHKEIDLKNPKTNRKNAGFTDEERGK 173 Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F ++ N GF D R + +YS+W Y + +KN G RID+ +S L A+I Sbjct: 174 FTEMLNAGFIDTFRYFYPDQEGIYSWWSYRFSARAKNAGWRIDYFCVSECLKDRLADAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 T G SDH P+ + L Sbjct: 234 LTDVMG----SDHCPIELDLK 250 >gi|189466093|ref|ZP_03014878.1| hypothetical protein BACINT_02463 [Bacteroides intestinalis DSM 17393] gi|189434357|gb|EDV03342.1| hypothetical protein BACINT_02463 [Bacteroides intestinalis DSM 17393] Length = 254 Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats. Identities = 81/262 (30%), Positives = 138/262 (52%), Gaps = 12/262 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60 + + T+NVN +RA + L W+++ D++C+QETK + +P E L +L Y ++ + Sbjct: 1 MKIITYNVNGLRAAVGKGLPEWLEQEQADVVCIQETKLQPDQYPEEALSALGYKHYLYSA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GVAIL+K +P + + ++ D + RFI A F + + ++Y P G Sbjct: 61 QKKGYSGVAILTKREPDHVEYGMGMEEYDNEGRFIRADFG----DISVVSVYHPSG-TSG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K+ W+++F + + + LI GDYNI +P D ++PI ++ F E R Sbjct: 116 DERQAFKMVWLEKFQEYVTGLRKSRPKLILCGDYNICHEPIDIHDPIRNATNSGFLPEER 175 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + + N GF D R H Y++W Y +S +KNKG RID+ M++ LL AR Sbjct: 176 EWMTRFLNAGFIDTFRLLHPEQQEYTWWSYRFNSRAKNKGWRIDYCMVTELVRPLLREAR 235 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I SDH P+++ ++ Sbjct: 236 ILNDA----VHSDHCPMLLDIE 253 >gi|282163799|ref|YP_003356184.1| exodeoxyribonuclease [Methanocella paludicola SANAE] gi|282156113|dbj|BAI61201.1| exodeoxyribonuclease [Methanocella paludicola SANAE] Length = 255 Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats. Identities = 57/261 (21%), Positives = 100/261 (38%), Gaps = 7/261 (2%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + WNVN +RA + W++ + DI+C+QETK + P E YH + Sbjct: 1 MRMLCWNVNGLRAVLKKGFVDWLRREDADIVCIQETKAAAEQMPPEVTGIPGYHFYSTSP 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 G + ++ + E + G ++ + + + + ++ Sbjct: 61 LEKKGYSGVALFTKEEPKSVSYGFGIEKYDIEGRTIIADYGKFVLLSIYFPN--GKMSQE 118 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + D K+ + FL + + ++ GD N D P + F R+ Sbjct: 119 RLDYKMGFYDAFLDYVDKLKAEGRKVVVCGDVNTAHTELDIARPKENSKKSGFLPMEREW 178 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 K + GF D R Y++WD + + +N G RID+ +S L A I+ Sbjct: 179 MDKFEAHGFIDTFRVFEKAGGHYTYWDTFTKARERNVGWRIDYFYVSDNLKKNLKGAFIE 238 Query: 243 TKPRGWTKPSDHTPVIVSLDI 263 G SDH PV + L I Sbjct: 239 PDVMG----SDHCPVGIDLKI 255 >gi|83745850|ref|ZP_00942907.1| Exodeoxyribonuclease III [Ralstonia solanacearum UW551] gi|83727540|gb|EAP74661.1| Exodeoxyribonuclease III [Ralstonia solanacearum UW551] Length = 318 Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats. Identities = 92/266 (34%), Positives = 141/266 (53%), Gaps = 8/266 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPD-----IICLQETKTEDKNFPFETLQSLNYHIE 58 + VATWNVNS++ R+ ++ W+ E D ++CLQE K D +P L + Y Sbjct: 50 MRVATWNVNSLKVRLPHVLQWLGEREADATPIDLLCLQELKLPDDRYPLAELDAAGYASL 109 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDV---QARFIEATFTINTQTLRIGNLYLPH 115 GQK+YNGVAIL++ + + + Q R + AT+ + +R+ + Y P+ Sbjct: 110 FTGQKTYNGVAILARKAAMPEGRDVIKNIPGFADEQQRIVAATYDVAGGPVRVISAYFPN 169 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 G + S K K+ W+ + ++ L+ GD+NI P D ++P WE Sbjct: 170 GQALDSDKMVYKMRWLAALQDWLKTEMDAHPRLMLLGDFNIAPDDRDVHDPKKWEGMNLV 229 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 + E R +F+ L++ G DA R L+S+WDY ++ +N G+RIDHI+LSPE Sbjct: 230 SPEERAAFRALESAGLVDAFRMFEQADKLFSWWDYRLFAFKRNAGLRIDHILLSPELAQR 289 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 S ID PRGW +PSDHTPV+ +L Sbjct: 290 CESCHIDRVPRGWEQPSDHTPVVAAL 315 >gi|116493341|ref|YP_805076.1| exonuclease III [Pediococcus pentosaceus ATCC 25745] gi|116103491|gb|ABJ68634.1| Exonuclease III [Pediococcus pentosaceus ATCC 25745] Length = 251 Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats. Identities = 79/262 (30%), Positives = 117/262 (44%), Gaps = 13/262 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + KE + DI C+QETK ++ E Y + Sbjct: 1 MKLISWNVNGLRAAVKHGFLDVFKELDADIFCIQETKLQEGQIELELPHYYQY-WNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +P+ + L ++ D + R I F + Y P+ P Sbjct: 60 KGYSGTAIFTKKKPLAVRYGLGIEEHDQEGRIITLEFE----KFYVITCYTPNSQPKLKR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + R +L +P+IF GD N+ Q D N +A FT E R Sbjct: 116 L--EYRMAWDDAFRAYIDQLNQHKPVIFCGDLNVAHQEIDLKNDKTNHKNAGFTDEERNK 173 Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L N GFTD R + +YS+W Y ++ + N G RID+ + S L A+I Sbjct: 174 FTQLLNSGFTDTYRYFYPSKEGVYSWWSYRFNARANNAGWRIDYFVSSKALDQKLTDAQI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 T+ G SDH PV + LDI Sbjct: 234 HTEIFG----SDHCPVELDLDI 251 >gi|256822174|ref|YP_003146137.1| exodeoxyribonuclease III [Kangiella koreensis DSM 16069] gi|256795713|gb|ACV26369.1| exodeoxyribonuclease III [Kangiella koreensis DSM 16069] Length = 271 Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 81/269 (30%), Positives = 123/269 (45%), Gaps = 9/269 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + T+N+NS+R R H + A +++++PDIICLQETK D FPFE L YHIE G K Sbjct: 1 MKIVTFNINSVRTRPHQIEALVEKHDPDIICLQETKVHDDAFPFELYADLGYHIEIHGGK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 ++ GVA SK +P+ + D D Q R I T+ +T+++ N Y P G Sbjct: 61 AHYGVATFSKQKPLTVEKGFATDPEDAQRRMIITTYQFGNETIKVLNGYFPQGENREHPV 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACFTL 177 L Q + + I GD NI P+ + E F Sbjct: 121 KFPYKQKFYADLLSYLQNDQGDHRTIVLGDINISPEDIDIGIGEPNRKRWLREGKCSFLP 180 Query: 178 EVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKN--KGIRIDHIMLSPEATS 234 E R+ QK+ G D R + +S++DY + + + +G+RID + Sbjct: 181 EEREWLQKILATGLYDTYRTINPDVDDKFSWFDYRSRGFEREPRRGLRIDSVFACDWLNE 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 ++ ID + R +PSDH PV D+ Sbjct: 241 RAVASDIDYEIRSMERPSDHAPVWTEFDL 269 >gi|309389686|gb|ADO77566.1| exodeoxyribonuclease III Xth [Halanaerobium praevalens DSM 2228] Length = 258 Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 73/267 (27%), Positives = 125/267 (46%), Gaps = 12/267 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN IRA WI PDI+ LQE + +D + NY+ Sbjct: 1 MRIYSWNVNGIRAVKKKGFLDWINNEQPDILGLQEIRIQDHQLKDDLRDLDNYYSYFNFG 60 Query: 63 KS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + Y+GVA+ +K +P+ + + + D + R I A F + N+Y P+G + Sbjct: 61 QKKGYSGVALYTKIEPLNVWSGIGIKRFDYEGRVIGAEFE----DFYLLNIYFPNGR-SS 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + + K+ + L ++ + + ++ GDYN P D ++P + + F R Sbjct: 116 KKRLNYKLDFYDAILDYSENLRKKGKEVVICGDYNTAHHPIDLHDPASNKKTSGFMPIER 175 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + KL+ G+ D+ R + YS+W Y + S+N G RID+ +S S L +A Sbjct: 176 EWLDKLEEKGYLDSYRYFNPEKECYSWWSYRTKARSRNAGWRIDYHFVSAGLESKLINAD 235 Query: 241 IDTKPRGWTKPSDHTPVIVSLDIPEPR 267 I T+ G SDH PV ++L + E + Sbjct: 236 ILTEVMG----SDHCPVTITLALDEKK 258 >gi|289641553|ref|ZP_06473715.1| exodeoxyribonuclease III Xth [Frankia symbiont of Datisca glomerata] gi|289508648|gb|EFD29585.1| exodeoxyribonuclease III Xth [Frankia symbiont of Datisca glomerata] Length = 425 Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 82/262 (31%), Positives = 125/262 (47%), Gaps = 6/262 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFP---FETLQSLNYHIETC 60 V VATWN+NS +AR L W+ PD++CLQETK D F E L Y + Sbjct: 82 VRVATWNINSAKARQARLIEWLDRAQPDVVCLQETKLSDAAFLELFDEDLFRRGYRVAHH 141 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 G +NGVAI S+ ++ L T +RI +LY+P+G + Sbjct: 142 GDGRWNGVAIFSRAGLDDVEAGLADGPGFPAPEPRALAATCGG--IRIWSLYVPNGRAVD 199 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 Y K++W+ + L P+I GD+NI P D ++P + T R Sbjct: 200 DPHYAYKLTWLAALRASVEKALTT-APVIACGDFNIAPTDADVWDPAAFAGATHVTDAER 258 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 ++ ++L ++G D +R ++++WDY A + KN G+RID ++ S + + Sbjct: 259 RALRELTDLGLVDVMRRRWPDEQVFTYWDYRALMFPKNMGMRIDLLLASDSLVDRVRAVW 318 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 +D + R T SDH PVIV LD Sbjct: 319 VDRQARKGTGTSDHAPVIVDLD 340 >gi|302343712|ref|YP_003808241.1| exodeoxyribonuclease III [Desulfarculus baarsii DSM 2075] gi|301640325|gb|ADK85647.1| exodeoxyribonuclease III [Desulfarculus baarsii DSM 2075] Length = 259 Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 88/258 (34%), Positives = 131/258 (50%), Gaps = 5/258 (1%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64 T+A++NVN +RAR+ L W+ N PD +CLQETK +D++FP + ++ L YH+ GQKS Sbjct: 4 TIASFNVNGLRARLGILGDWLAHNQPDAVCLQETKVQDQDFPRQAVEELGYHVAFHGQKS 63 Query: 65 YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124 YNGVAILSK E D QAR + A L + N+Y P G + + Sbjct: 64 YNGVAILSKRPADEHGHGFGELWDDDQARLLWAKLDG----LWVINVYAPQGRDPSDPAF 119 Query: 125 DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ 184 K+ + +R + R E L+ GD+N+ PQ D ++P+ + R ++ Sbjct: 120 AYKLEFFRRLRAWLEARFSPGEALVCCGDFNVAPQDIDLHDPVKLAGQVGCHPDERAAYA 179 Query: 185 KLQNMGFTDAIRATHDTHHLYSFWDYY-ADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + + G D R H ++FWDY + S++ G RIDHI+ S +D Sbjct: 180 NVLDWGLEDVFRRLHPAQKQFTFWDYRLRGALSRDLGWRIDHILASAGLAPACGQCLVDM 239 Query: 244 KPRGWTKPSDHTPVIVSL 261 PR KPSDHTP++ Sbjct: 240 APRRLEKPSDHTPILARF 257 >gi|187918395|ref|YP_001883958.1| exodeoxyribonuclease III [Borrelia hermsii DAH] gi|119861243|gb|AAX17038.1| exodeoxyribonuclease III [Borrelia hermsii DAH] Length = 253 Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 68/262 (25%), Positives = 109/262 (41%), Gaps = 13/262 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC-- 60 + + +WNVN IRA +I++ NPDI+CLQETK + P E + Y+ Sbjct: 1 MNLISWNVNGIRAVFGKGFFEFIEKYNPDILCLQETKACKEQLPKELISIEGYYSYFSKS 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 K Y+GVA+ SK +PI++ E I I + Sbjct: 61 IIKGYSGVALYSKIEPIKLENMRMEIFD------REGRCLIAHYRDFILINAYFPNSQAL 114 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + + K+ ++ A+ + + ++ GD+NI D NP A F +E Sbjct: 115 RKRLNYKLEFLMSLESIANSFVTAGKNVVICGDFNIAHTEIDLSNPKSSRESAGFYIEET 174 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 N G+ D R + Y++WDY + +N G RID+ +++ S + A Sbjct: 175 TWMDNFLNGGYVDTFRMFNGEPGNYTWWDYRTRARERNIGWRIDYFLVNKVFKSEVRDAL 234 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I + G SDH PV + L Sbjct: 235 ILNEVMG----SDHCPVFLELK 252 >gi|84625943|ref|YP_453315.1| exodeoxyribonuclease III [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|84369883|dbj|BAE71041.1| exodeoxyribonuclease III [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 259 Score = 194 bits (492), Expect = 2e-47, Method: Composition-based stats. Identities = 87/259 (33%), Positives = 135/259 (52%), Gaps = 6/259 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A+WNVNS+ R+ +L W+ PD++ +QETK ED FP L L Y CGQK Sbjct: 1 MKIASWNVNSLNVRLPHLQQWLTAFAPDVVGIQETKLEDHRFPDAALAELGYRSVFCGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAILS+ +++ +PG D Q +RI NLY+ +G + + K Sbjct: 61 TYNGVAILSRSPALDVQMGIPGFDDVQQRVIAATVDG-----VRIINLYVVNGQDVGTDK 115 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN-PIIWENDACFTLEVRQS 182 Y K+ W+ + +Q L+ L+ GD+NI P D ++ + E+ + + R + Sbjct: 116 YAYKLRWLAAAHDWIAQELQTYPQLVVLGDFNIAPDARDVHDATVWNEHHILTSTDERAA 175 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 +KL +G DA R +S+WDY + +N G+RID ++S + + ID Sbjct: 176 LEKLLALGLHDAFRLHTQDAEHFSWWDYRQAGFRRNLGLRIDLTLVSDALRTRAVESGID 235 Query: 243 TKPRGWTKPSDHTPVIVSL 261 +PR W +PSDH P V L Sbjct: 236 REPRTWERPSDHAPAWVRL 254 >gi|325281386|ref|YP_004253928.1| exodeoxyribonuclease III Xth [Odoribacter splanchnicus DSM 20712] gi|324313195|gb|ADY33748.1| exodeoxyribonuclease III Xth [Odoribacter splanchnicus DSM 20712] Length = 257 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 84/265 (31%), Positives = 134/265 (50%), Gaps = 13/265 (4%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59 ++ + T+NVN +R+ + W+ E PDI+CLQETK + P ++L Y + Sbjct: 1 MIKIITYNVNGLRSALSKGFTDWLAEELPDIVCLQETKAQPDQIPTLEFEALGYRSFFFS 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GVAIL++ P + + + D + RF+ A + L I ++Y P G Sbjct: 61 AEKKGYSGVAILTRITPDHLEYGMGMQEYDREGRFLRADYG----DLSIVSVYHPSG-TT 115 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K+ W++ F + + + + LI GDYNI +P D ++P+ N + F E Sbjct: 116 GEERQAFKMKWLEDFRHYVMKLSKTRKKLILCGDYNICHRPIDIHDPVRNANSSGFLPEE 175 Query: 180 RQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R+ GFTD R H H Y++W + A++ + NKG RID+ M+SPE LL Sbjct: 176 REWMSLFLESGFTDTFRYFHPEEPHQYTWWSFRANARNNNKGWRIDYCMVSPEVIPLLKD 235 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263 A I + K SDH P +V L + Sbjct: 236 AYILPQV----KHSDHCPAVVELKV 256 >gi|319943026|ref|ZP_08017309.1| exodeoxyribonuclease III [Lautropia mirabilis ATCC 51599] gi|319743568|gb|EFV95972.1| exodeoxyribonuclease III [Lautropia mirabilis ATCC 51599] Length = 268 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 87/262 (33%), Positives = 136/262 (51%), Gaps = 5/262 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS++ R+ ++ W+ N D +CLQETK D FP + +++ Y + GQ Sbjct: 1 MQLATWNVNSLKMRLQHVLDWLAANPVDFLCLQETKLTDDKFPKDEIEAAGYGVIFTGQP 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIE---ATFTINTQTLRIGNLYLPHGNPIT 120 +YNGVA+L + + + + ++ + A F +R+ Y P+G + Sbjct: 61 TYNGVALLYRKEAGYVPDGVQLNNPLYEDVQRRLVSARFQTAAGPVRVIGAYFPNGQAVG 120 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPL--IFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 S KY K+ WI + +Q E I AGD+NI P D ++P +W + + Sbjct: 121 SEKYVYKLGWIASLQEWIAQLRREEPDTGVILAGDFNIAPADADVHDPAVWADGILVSGP 180 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R++ Q L +G DA R L+S+WDY A + +N G+RID I++S E ++ Sbjct: 181 EREALQGLLALGLHDAFRLFEQPPKLFSWWDYRALGFRRNAGLRIDLILVSDELKPMVGR 240 Query: 239 ARIDTKPRGWTKPSDHTPVIVS 260 ID PR KPSDHTPV+V Sbjct: 241 CWIDKGPRKLEKPSDHTPVVVE 262 >gi|88657831|ref|YP_507482.1| exodeoxyribonuclease III [Ehrlichia chaffeensis str. Arkansas] gi|88599288|gb|ABD44757.1| exodeoxyribonuclease III [Ehrlichia chaffeensis str. Arkansas] Length = 281 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 99/280 (35%), Positives = 153/280 (54%), Gaps = 17/280 (6%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +ATWNVNSIR R+ +L W+ + DI LQE K D+ FPF ++SL Y GQ Sbjct: 2 TLKIATWNVNSIRKRLDHLCNWLINSAIDIALLQEIKCTDEQFPFFDVESLGYKCYVHGQ 61 Query: 63 KSYNGVAILSKYQPI-----------------EIVTHLPGDDLDVQARFIEATFTINTQT 105 K+ NGVAI+++Y + ++ ++R++E + Sbjct: 62 KARNGVAIITRYPIVGELVTSIFSSDYKSKLCYELSSENFIYNCDESRYLECVVLHHNIK 121 Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165 +RI ++Y+P+G I S + K+ + + A L+ EE LI GDYN+ P P D Y+ Sbjct: 122 IRIASIYVPNGQSIDSDAFQYKLGFFDQLREHALSLLKKEEILILGGDYNVAPYPIDVYD 181 Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225 P + + CF R+ F+ + N+GFTD+ R +D +S+W+Y A +W +N+G+RID+ Sbjct: 182 PEVMDGKLCFHKSEREKFRSILNLGFTDSFRVLNDYEKKFSWWNYKAGAWQQNRGLRIDN 241 Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 ++LSP+AT L S I K RG PSDH PV+ LD+ Sbjct: 242 LLLSPQATDKLLSCVIHDKLRGLDTPSDHAPVVCELDLSS 281 >gi|255325807|ref|ZP_05366899.1| exodeoxyribonuclease III [Corynebacterium tuberculostearicum SK141] gi|311740107|ref|ZP_07713940.1| exodeoxyribonuclease III [Corynebacterium pseudogenitalium ATCC 33035] gi|255297019|gb|EET76344.1| exodeoxyribonuclease III [Corynebacterium tuberculostearicum SK141] gi|311304803|gb|EFQ80873.1| exodeoxyribonuclease III [Corynebacterium pseudogenitalium ATCC 33035] Length = 269 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 77/267 (28%), Positives = 132/267 (49%), Gaps = 8/267 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+NS+R R I +++ D++CLQETK +D FP E + H+ G Sbjct: 1 MRIATWNINSVRTRTQRALNLISKHDIDVLCLQETKVKDDKFPREVFEDAGLHVTCHGLN 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT-----QTLRIGNLYLPHGNP 118 +NGVAI+SK +P ++ PG + + + I +LY+P+G Sbjct: 61 QWNGVAIVSKEEPEDVFIGFPGQPGFAKDPEKPQDREARALGARIRGVEIWSLYVPNGRE 120 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 IT YD K+ ++ R+A + + L+ +GD+NI P+ D ++ + T Sbjct: 121 ITDRHYDYKLDFLYHLARYAENHAQSK--LLMSGDFNIAPRDEDVWDIEAFRGKTHVTEP 178 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R +FQ L+ G + R + Y+++DY + KN+G+RID + S + Sbjct: 179 ERAAFQMLEEAGLEEVTRRFTE-DQRYTYFDYKGMRFQKNEGMRIDFQLASAPLAQHVTG 237 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIPE 265 A++D R K SDH P++ ++P+ Sbjct: 238 AQVDMVERAGDKTSDHCPLLADYNLPD 264 >gi|68171888|ref|ZP_00545213.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Ehrlichia chaffeensis str. Sapulpa] gi|67998687|gb|EAM85414.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Ehrlichia chaffeensis str. Sapulpa] Length = 281 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 98/280 (35%), Positives = 152/280 (54%), Gaps = 17/280 (6%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +ATWNVNSIR R+ +L W+ + DI LQE K D+ FPF ++SL Y GQ Sbjct: 2 TLKIATWNVNSIRKRLDHLCNWLINSAIDIALLQEIKCTDEQFPFFDVESLGYKCYVHGQ 61 Query: 63 KSYNGVAILSKYQPI-----------------EIVTHLPGDDLDVQARFIEATFTINTQT 105 K+ NGVAI+++Y + ++ ++R++E + Sbjct: 62 KARNGVAIITRYPIVGELVTSIFSSDYKSKLCYELSSENFIYNCDESRYLECVVLHHNIK 121 Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165 +RI ++Y+P+G I S + K+ + + L+ EE LI GDYN+ P P D Y+ Sbjct: 122 IRIASIYVPNGQSIDSDAFQYKLGFFDQLREHVLSLLKKEEILILGGDYNVAPYPIDVYD 181 Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225 P + + CF R+ F+ + N+GFTD+ R +D +S+W+Y A +W +N+G+RID+ Sbjct: 182 PEVMDGKLCFHKSEREKFRSILNLGFTDSFRVLNDYEKKFSWWNYKAGAWQQNRGLRIDN 241 Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 ++LSP+AT L S I K RG PSDH PV+ LD+ Sbjct: 242 LLLSPQATDKLLSCVIHDKLRGLDTPSDHAPVVCELDLSS 281 >gi|116749760|ref|YP_846447.1| exodeoxyribonuclease III Xth [Syntrophobacter fumaroxidans MPOB] gi|116698824|gb|ABK18012.1| Exodeoxyribonuclease III [Syntrophobacter fumaroxidans MPOB] Length = 265 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 80/260 (30%), Positives = 127/260 (48%), Gaps = 5/260 (1%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64 VAT+NVN IR+R+ + W+ + PD +CLQE K ++ +FP + + Y GQK+ Sbjct: 4 KVATFNVNGIRSRMAPVLEWLDRHRPDALCLQELKCQNADFPLDAFRKAGYFAAFRGQKA 63 Query: 65 YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124 +NGVA+LS+ +P E++ D +AR I + + I N Y+P G + Sbjct: 64 FNGVAVLSRSEPSEVLLEFGDGKPDEEARLIA----VKLNGIWIVNTYVPQGRSPEEPAF 119 Query: 125 DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ 184 + K+ + R + R E +PL++ GD N+ P+ D ++P F ++ Sbjct: 120 EYKLDFFGRLKSWLDGRFEPSQPLVWTGDINVAPEAIDLFDPKRLAGKVSFHPREHEALA 179 Query: 185 KLQNMGFTDAIRATHDTHHLYSFWDYY-ADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + G D R H ++FWDY S+ +N G R+DHI + + D Sbjct: 180 AVAAWGLVDVFRKLHPDTKQFTFWDYRLPQSFKRNLGWRLDHIYATRTLADACLECQADG 239 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 +PRG PSDHTPV D+ Sbjct: 240 EPRGRETPSDHTPVWAEFDL 259 >gi|146340267|ref|YP_001205315.1| exodeoxyribonuclease III [Bradyrhizobium sp. ORS278] gi|146193073|emb|CAL77084.1| exodeoxyribonuclease III (Exonuclease III) (EXO III) (AP endonuclease VI) [Bradyrhizobium sp. ORS278] Length = 262 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 89/256 (34%), Positives = 141/256 (55%), Gaps = 3/256 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+N+N++R R+ NL AW++ PDI+CLQE K FP E + Y GQK Sbjct: 1 MKIATFNINNVRRRLPNLLAWLRAAKPDIVCLQELKCTLAEFPVEEIAKAGYGAVWQGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 ++NGVAIL++ ++ + + + I LYLP+GNP K Sbjct: 61 TWNGVAILARKAEPVLIR---TALPGDPSDKEARYIEAAVRGIVIACLYLPNGNPQPGPK 117 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 +D K++W KR + A++ ++ + P++ AGDYN+ P P D Y W+ DA + R ++ Sbjct: 118 FDYKLAWFKRLHKHAAKFIKDDLPVVLAGDYNVAPTPLDIYPTKSWDKDALIQPKSRAAY 177 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 L N G+ DAIR H +++FWDY + W ++ G+R+DH++LSP+ L +A +D Sbjct: 178 AALVNQGWCDAIRTLHPDAPMFTFWDYKRNRWPRDAGLRLDHLLLSPQLAPRLKTAGVDR 237 Query: 244 KPRGWTKPSDHTPVIV 259 RG SDH P + Sbjct: 238 AIRGEDGASDHAPAWI 253 >gi|149374747|ref|ZP_01892520.1| exonuclease III [Marinobacter algicola DG893] gi|149360636|gb|EDM49087.1| exonuclease III [Marinobacter algicola DG893] Length = 270 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 84/271 (30%), Positives = 127/271 (46%), Gaps = 11/271 (4%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 ++ ++NVNSIR R+H L A I NPD I LQETK D+ FP + ++ L YH+ GQ Sbjct: 1 MM-FVSFNVNSIRTRLHQLEAVIDSLNPDFIGLQETKVTDEEFPEDAIRELGYHVHFHGQ 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K++ GVA+LS+ P + P D Q R I FT+N + L + N Y P G Sbjct: 60 KTHYGVALLSRQAPDSVQKGYPWDGEGSQRRLITGHFTVNGRKLTVINGYFPQGESRDHP 119 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175 K+ K + +R+ + ++ GD NI P D + F Sbjct: 120 VKFPAKEKFYADLMRYLDELKAANGEIVVMGDMNISPTDQDIGIGADNAKRWLRTGKCSF 179 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKN--KGIRIDHIMLSPEA 232 E R+ ++++ GFTD R H +S++DY + + ++ +G+RID IM S Sbjct: 180 LPEEREWLGQVESRGFTDVFRHLHPEESDTFSWFDYRSKGFDRDPRRGLRIDLIMASDPL 239 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 A + R +PSDH PV + Sbjct: 240 LPKAEEAGVSYDIRAMERPSDHCPVWARFAL 270 >gi|295136350|ref|YP_003587026.1| exodeoxyribonuclease [Zunongwangia profunda SM-A87] gi|294984365|gb|ADF54830.1| exodeoxyribonuclease [Zunongwangia profunda SM-A87] Length = 253 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 80/263 (30%), Positives = 126/263 (47%), Gaps = 14/263 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY---HIET 59 + + ++NVN IRA I WI++ NPD++CLQE K + E Y + Sbjct: 1 MRIISYNVNGIRAAIRKGFLDWIQQANPDVVCLQEIKAQPDQLNLEEFTDAGYPYQYWYP 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GVAILSK +P + D +D + R I A F + +LYLP G I Sbjct: 61 AKKKGYSGVAILSKTEPNHVEYGTGIDYMDDEGRNIRADFG----DFSVMSLYLPSGTNI 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K+ ++ F ++ + LI GDYNI + D ++P+ +N + F Sbjct: 117 NR--LEHKLQYMDDFQQYIDSLKQQIPNLIICGDYNICHEAIDIHDPVRLKNVSGFLPVE 174 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R+ GF D+ R +D YS+W Y A++ + NKG RID+ +++ L A Sbjct: 175 REWIDNFMKSGFIDSFRYFNDEPDQYSWWSYRANARANNKGWRIDYNLVAAPLQEKLKRA 234 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 I + SDH P++V L+ Sbjct: 235 VILPEAY----HSDHCPILVELE 253 >gi|160894365|ref|ZP_02075142.1| hypothetical protein CLOL250_01918 [Clostridium sp. L2-50] gi|156864066|gb|EDO57497.1| hypothetical protein CLOL250_01918 [Clostridium sp. L2-50] Length = 262 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 72/264 (27%), Positives = 117/264 (44%), Gaps = 13/264 (4%) Query: 2 SVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 + + + +WNVN IRA + N + KE + DI C+QE+K ++ E L + Sbjct: 10 TTMKMISWNVNGIRACVGKNFMDFFKEADADIFCIQESKMQEGQLQLE-LPGYYQYWNYA 68 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+G AI +K +P+ + + ++ D + R I + + Sbjct: 69 EKKGYSGTAIFAKKEPLSVAYGIGIEEHDHEGRVITLEYDNFYMVTVYTPNSQNELARLD 128 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + R ++LE +P++ GD N+ D NP +A FT E R Sbjct: 129 YRM------KWEDDFREYLKQLEQTKPVVVCGDMNVAHTEIDLKNPKTNRKNAGFTDEER 182 Query: 181 QSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + F L + GF D R + +YS+W Y + KN G RID+ + S S L A Sbjct: 183 EKFSTLLDSGFVDTFRFFNPDAEGIYSWWSYRFKAREKNAGWRIDYFLTSKVLESRLVDA 242 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 +I T+ G SDH PV + +D+ Sbjct: 243 KIHTEVLG----SDHCPVELDIDL 262 >gi|226309896|ref|YP_002769790.1| exodeoxyribonuclease [Brevibacillus brevis NBRC 100599] gi|226092844|dbj|BAH41286.1| exodeoxyribonuclease [Brevibacillus brevis NBRC 100599] Length = 253 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 69/260 (26%), Positives = 114/260 (43%), Gaps = 13/260 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + KE N DI CLQETK ++ E ++ + + + Sbjct: 1 MKLISWNVNGLRACVNKGFYEYFKEANADIFCLQETKLQEGQIEMEIGEAYHQYWNYAEK 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G A+ +K +P+ + L D T+ N + Sbjct: 61 KGYSGTAVFTKMEPLSVRYGLEEDHEPEGRVITLEFQDFYLVTVYTPNA------KRDLS 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + D ++ W RF + Q L+ ++P++ GD N+ Q D N ++ FT E R+ Sbjct: 115 RLDYRLEWEDRFRNYLLQ-LDGKKPVVVCGDLNVAHQEIDLKNAKSNRGNSGFTPEEREK 173 Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 L GF D R + Y++W + +N G RID+ + S L A I Sbjct: 174 MTSLLAAGFVDTYRYFYPDQTDAYTWWSFMPKVRERNIGWRIDYFLASERLAPALLRAGI 233 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 D++ G SDH PV++ L Sbjct: 234 DSQVMG----SDHCPVVLEL 249 >gi|313618350|gb|EFR90386.1| exodeoxyribonuclease III [Listeria innocua FSL S4-378] Length = 253 Score = 193 bits (491), Expect = 2e-47, Method: Composition-based stats. Identities = 65/261 (24%), Positives = 112/261 (42%), Gaps = 13/261 (4%) Query: 5 TVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +WNVN +RA + + +E + DI CLQETK ++ + L + + +K Sbjct: 4 KLISWNVNGLRAAVKKGFLEYFEEVDADIFCLQETKLQEGQIELD-LPAYKDYWNYAVKK 62 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 Y+G AI +K +P+ + L + D + R I F + Sbjct: 63 GYSGTAIFTKVEPLSVQYGLGVPEHDTEGRVITLEFEDFYMVTVYTPNSQAELKRLDYRM 122 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + + + L+ +P++ GD N+ + D NP +A F+ E R F Sbjct: 123 ------TFEDAILEYVKNLDKTKPVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKF 176 Query: 184 QKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 + GF D+ R + YS+W Y ++ ++N G RID+ ++S L A+I Sbjct: 177 SAFLDAGFIDSFRYFYPDLTDAYSWWSYRMNARARNTGWRIDYFVVSERLKDKLVDAKIH 236 Query: 243 TKPRGWTKPSDHTPVIVSLDI 263 G SDH PV + L++ Sbjct: 237 ADVLG----SDHCPVELELNL 253 >gi|189184108|ref|YP_001937893.1| exodeoxyribonuclease III [Orientia tsutsugamushi str. Ikeda] gi|189180879|dbj|BAG40659.1| exodeoxyribonuclease III [Orientia tsutsugamushi str. Ikeda] Length = 264 Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 101/264 (38%), Positives = 147/264 (55%), Gaps = 2/264 (0%) Query: 1 MS-VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETL-QSLNYHIE 58 MS + + TWN+NSIRAR + L I + PDII LQE K E NFPF+ + +S Y+ Sbjct: 1 MSCKLKILTWNINSIRARAYQLNQLISDTQPDIILLQEIKCESHNFPFQEINESHKYNFS 60 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 GQKSYNGVAILSK+ +I G+ QARFIEA +++ ++Y+P+G Sbjct: 61 INGQKSYNGVAILSKFPLEDIKFSFLGNPCPDQARFIEANCLTEVGYVKVISIYVPNGGE 120 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + S K+ K+ +I F+++ L E +I GD+N+ P +D Y+ I +N CFTL Sbjct: 121 VNSDKFQIKLLFIDEFIKYLHSSKNLGESIILGGDFNVAPYDNDVYSAIELQNTTCFTLP 180 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 +Q +KL N F D R H +++WDY A ++ +N G+RID+I+ + Sbjct: 181 EKQYIRKLINHNFIDIYRLFHQRQKKFTWWDYRAGAFERNLGMRIDYILCTISIALKATD 240 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 ID R + SDH PVI S + Sbjct: 241 CYIDYHTRNNHRASDHAPVIASFE 264 >gi|329964785|ref|ZP_08301808.1| exodeoxyribonuclease III [Bacteroides fluxus YIT 12057] gi|328524636|gb|EGF51699.1| exodeoxyribonuclease III [Bacteroides fluxus YIT 12057] Length = 254 Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 81/261 (31%), Positives = 137/261 (52%), Gaps = 12/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60 + + T+NVN +RA + L W+ + PD++CLQETK + + +P + L SL Y ++ + Sbjct: 1 MKIITYNVNGLRAAVTKGLPEWLAQEQPDVLCLQETKLQPEQYPADALDSLGYRHYLYSA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GVAIL++ +P + + ++ D + RFI A + L + ++Y P G Sbjct: 61 QKKGYSGVAILTRREPDHVEYGMGIEEYDNEGRFIRADYG----DLSVVSVYHPSG-TSG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K+ W+++F + + LI GDYNI +P D ++PI ++ F E R Sbjct: 116 DERQAFKMVWLEKFQEYVLELQRTRPKLILCGDYNICHEPIDIHDPIRNATNSGFLPEER 175 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + + N GF D+ R H Y++W Y +S +KNKG RID+ M+S +L A+ Sbjct: 176 EWMTRFLNAGFIDSFRLLHPDKQEYTWWSYRFNSRAKNKGWRIDYCMVSEPVRPMLKEAQ 235 Query: 241 IDTKPRGWTKPSDHTPVIVSL 261 I SDH P+ + + Sbjct: 236 ILNGA----VHSDHCPMSLEI 252 >gi|58617116|ref|YP_196315.1| exodeoxyribonuclease III [Ehrlichia ruminantium str. Gardel] gi|58416728|emb|CAI27841.1| Exodeoxyribonuclease III [Ehrlichia ruminantium str. Gardel] Length = 278 Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 93/278 (33%), Positives = 146/278 (52%), Gaps = 17/278 (6%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 ++ +ATWNVNSIR RI +L W+ + N DI LQE K + FP ++SL Y+ GQ Sbjct: 1 MLRIATWNVNSIRKRIDHLCTWLTDYNIDIALLQEIKCTNDQFPALEIKSLGYNYYVHGQ 60 Query: 63 KSYNGVAILSKYQPI-----------------EIVTHLPGDDLDVQARFIEATFTINTQT 105 K+ NGVAI++KY + + ++R++E N Sbjct: 61 KARNGVAIITKYPIVEEVVTNIFSLYGTSNVCCELGSEDFTYNCEESRYLECVILYNGIK 120 Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165 +R+G++Y+P+G + S + K+ + + + S L+ EE I GDYN+ P P D Y+ Sbjct: 121 IRVGSIYVPNGQSVESDAFQYKLGFFDQLKEYMSFLLKKEEICILGGDYNVAPYPIDMYS 180 Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225 I C R+ F+ + N GF DA R +D +++W+Y SW +NKG+RID Sbjct: 181 YEIMNGKLCCHQFEREKFRSIINTGFFDAFRLLNDDKKQFTWWNYKFGSWQENKGLRIDM 240 Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 ++LSP+A + S + + RG PSDH PV+ L++ Sbjct: 241 LLLSPQAMDKVSSCVVHDELRGLNVPSDHVPVVCDLNL 278 >gi|87122253|ref|ZP_01078135.1| exodeoxyribonuclease III [Marinomonas sp. MED121] gi|86162396|gb|EAQ63679.1| exodeoxyribonuclease III [Marinomonas sp. MED121] Length = 274 Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 85/269 (31%), Positives = 126/269 (46%), Gaps = 9/269 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +RAR H + +K +PDII LQE K D+ FP + QS+ YH GQK Sbjct: 1 MKIVSFNINGLRARPHQIEELVKRQSPDIIGLQEIKVHDEMFPHDIPQSIGYHAYYYGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 S+ GVAI SK + +++ P D+ D Q R I ATF + L++ N Y P G I Sbjct: 61 SHYGVAIFSKEEAVKVEYGFPNDEEDAQRRMIIATFNTDKGPLKVINGYFPQGENIEHET 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACFTL 177 L +E +I GD NI P D + F Sbjct: 121 KFPAKQKFYADLMNYLANHVADEQVIVMGDINISPTDLDIGIGPQNAKRWLKTGKCSFQP 180 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSK--NKGIRIDHIMLSPEATS 234 R+ + KL++ G TD R + YS++DY + + +G+RID IM S Sbjct: 181 IEREWYAKLEDWGLTDTYRQLNPGKTDRYSWFDYRSKGFDDEPKRGLRIDVIMASNNLLP 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 LL + ++ RG KPSDH P+ ++ Sbjct: 241 LLQDSDVNYDIRGMEKPSDHAPIWSDFEL 269 >gi|58584173|ref|YP_203189.1| exodeoxyribonuclease III [Xanthomonas oryzae pv. oryzae KACC10331] gi|188579169|ref|YP_001916098.1| exodeoxyribonuclease III [Xanthomonas oryzae pv. oryzae PXO99A] gi|58428767|gb|AAW77804.1| exodeoxyribonuclease III [Xanthomonas oryzae pv. oryzae KACC10331] gi|188523621|gb|ACD61566.1| exodeoxyribonuclease III [Xanthomonas oryzae pv. oryzae PXO99A] Length = 259 Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 88/259 (33%), Positives = 135/259 (52%), Gaps = 6/259 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A+WNVNS+ R+ +L W+ PD++ +QETK ED FP L L Y CGQK Sbjct: 1 MKIASWNVNSLNVRLPHLQQWLTAFAPDVVGIQETKLEDHRFPDAALAELGYRSVFCGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAILS+ +++ +PG D Q +RI NLY+ +G + + K Sbjct: 61 TYNGVAILSRSPALDVQMGIPGFDDVQQRVIAATVDG-----VRIINLYVVNGQDVGTDK 115 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN-PIIWENDACFTLEVRQS 182 Y K+ W+ + +Q L+ L+ GD+NI P D ++ + E+ + + R + Sbjct: 116 YAYKLRWLAAAHDWIAQELQTYPQLVVLGDFNIAPDARDVHDATVWNEHHILTSTDERAA 175 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 +KL MG DA R +S+WDY + +N G+RID ++S + + ID Sbjct: 176 LEKLLAMGLHDAFRLHTQDAEHFSWWDYRQAGFRRNLGLRIDLTLVSDALRTRAVESGID 235 Query: 243 TKPRGWTKPSDHTPVIVSL 261 +PR W +PSDH P V L Sbjct: 236 REPRTWERPSDHAPAWVRL 254 >gi|77919973|ref|YP_357788.1| exonuclease III [Pelobacter carbinolicus DSM 2380] gi|77546056|gb|ABA89618.1| Exodeoxyribonuclease III [Pelobacter carbinolicus DSM 2380] Length = 276 Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 88/272 (32%), Positives = 136/272 (50%), Gaps = 11/272 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++NVN IRAR+H L A I ++P+II +QETK D +FP + ++ L YH+E GQK Sbjct: 1 MKIVSFNVNGIRARLHQLRAVIDNHSPEIIGVQETKVTDADFPVDAIRELGYHVEYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGD-DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 S+ GVA+LS+ P+++V LPGD + A T + + L + N Y P G Sbjct: 61 SHYGVALLSRQAPVQVVKGLPGDAQDAQRRLIGAAYETEHGEPLWVFNAYFPQGESRQHP 120 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175 KY K + + F R E LI GD N+ + D + F Sbjct: 121 TKYPGKERFYRELGDFLESRFSPEADLIVMGDANVAFRDEDIGIGQDNAKRWLRTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKN--KGIRIDHIMLSPEA 232 E R ++L + G D R + D L+S++DY + + K+ +G+RID I+ + Sbjct: 181 LPEERDWLRRLFDWGLVDTFRQSRSDAAELFSWFDYRSRGFEKDPRRGLRIDLILATQVL 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 + + ID RG KPSDH P+ +D+ Sbjct: 241 SRRCSGSGIDYGIRGMEKPSDHCPIWAEVDLS 272 >gi|315223362|ref|ZP_07865221.1| exodeoxyribonuclease III [Capnocytophaga ochracea F0287] gi|314946693|gb|EFS98682.1| exodeoxyribonuclease III [Capnocytophaga ochracea F0287] Length = 254 Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 83/263 (31%), Positives = 132/263 (50%), Gaps = 14/263 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY---HIET 59 + ++NVN IRA + A W+K NPD++CLQE K + P E L Y + + Sbjct: 1 MKTISYNVNGIRAALTKGFAEWLKSANPDVLCLQEIKATEDQIPTEVFSELGYKYQYYHS 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GVAILSK +P + D +D + R + A F L + +LYLP G Sbjct: 61 AEKKGYSGVAILSKIEPKHVEVGTGIDYMDKEGRVLRADFET----LSVMSLYLPSGTNP 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 D K++++ F ++ + + L+ GDYNI + D ++PI N + F Sbjct: 117 DR--LDFKLTFMADFKKYIDKLKQKVPNLVICGDYNICHEAIDIHDPIRNANVSGFLPIE 174 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R+ K GF D+ R H H YS+W Y A++ + NKG RID+ ++S + + A Sbjct: 175 REWLDKFMKSGFIDSFRYFHKEAHQYSWWSYRANARNNNKGWRIDYHLVSTPLENRMERA 234 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 I + K SDH P+++ ++ Sbjct: 235 LILPEA----KHSDHCPILLIIN 253 >gi|254796778|ref|YP_003081615.1| exodeoxyribonuclease III [Neorickettsia risticii str. Illinois] gi|254590017|gb|ACT69379.1| exodeoxyribonuclease III [Neorickettsia risticii str. Illinois] Length = 260 Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 80/261 (30%), Positives = 135/261 (51%), Gaps = 4/261 (1%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 ++ VATWNVNSIR R ++A + + D++ LQE K ++ +FP L+Y++ Q Sbjct: 1 MLKVATWNVNSIRQRAEAVSALLVSEDLDVLLLQELKCQESDFPLHVFHDLSYNVILKCQ 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K YNGVAI S+ + I +D +AR++E + + +R+ ++Y+P+ S Sbjct: 61 KGYNGVAIASR---LPITKISDEIYMDGEARYVEGVISFFDKCIRLISVYVPNAQAAGSP 117 Query: 123 KYDDKISWIKRFLRFASQRL-ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 +++ K+ + R L + ++ GD N P+ D Y+ + + F +E R Sbjct: 118 RFEYKMQFHDALARRIHCYLLNNNDIILLGGDMNAAPEDIDVYDHVKLDGCTGFHIEERS 177 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 ++L N+G D R + T +S+WDY +N+G+RIDHI+ S E L I Sbjct: 178 KLRELLNLGLFDTFRMKYPTKQEFSWWDYRGGGLQRNEGMRIDHILASAEGMDHLLDCYI 237 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 + R +PSDH PV+ L+ Sbjct: 238 LKELRHIARPSDHVPVVCVLN 258 >gi|330506670|ref|YP_004383098.1| exodeoxyribonuclease III [Methanosaeta concilii GP-6] gi|328927478|gb|AEB67280.1| exodeoxyribonuclease III [Methanosaeta concilii GP-6] Length = 257 Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 69/266 (25%), Positives = 112/266 (42%), Gaps = 12/266 (4%) Query: 1 MSVVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 M + + +WNVN +RA W+ ++ PD++CLQE K + P E Y Sbjct: 1 MPSMRILSWNVNGLRAIYKKGFVDWLLKDRPDVLCLQEIKATEDQIPKELKGLPGYISFF 60 Query: 60 CG--QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 +K +GVA+ +K + + + L D + R I A + + ++Y P+G Sbjct: 61 SPGARKGRDGVALFTKIKTLSLEYSLGLPGFDDEQRAIVADYG----DFLLFDVYFPNGK 116 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + + K+ + FL + + ++ GD N + D P E + F Sbjct: 117 -ASKERLSYKMRFYDLFLDLMDRLVAEGRDIVICGDVNTAHKEIDLARPKPNEKISGFLP 175 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 E R +L GF D R H YSFWD + +N G RID+ +S + Sbjct: 176 EERAWIDRLIEHGFLDTFRLFHPEGEKYSFWDMKTRARERNVGWRIDYFFVSLGMRDRVK 235 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263 SA I G SDH PV + +++ Sbjct: 236 SAFILDDVYG----SDHCPVGIEIEL 257 >gi|220909952|ref|YP_002485263.1| exodeoxyribonuclease III Xth [Cyanothece sp. PCC 7425] gi|219866563|gb|ACL46902.1| exodeoxyribonuclease III Xth [Cyanothece sp. PCC 7425] Length = 268 Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats. Identities = 91/266 (34%), Positives = 141/266 (53%), Gaps = 8/266 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSIR R+ + W++ N D++CLQETK D +FP L Y + GQK Sbjct: 1 MKIATWNVNSIRTRLVQVVEWLQANPIDVLCLQETKVIDSDFPRSPFLDLGYQVHCYGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL-------RIGNLYLPHG 116 SYNGVAILS+ +P ++ + D F + + R+ NLY+P+G Sbjct: 61 SYNGVAILSRSEPDQVRSGFATVLADSPQVEAALEFDQQKRVISAVWGNLRVVNLYVPNG 120 Query: 117 NPITSTKYDDKISWIKRFLRFASQ-RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + I S KY K++W+ + + + + ++ GD+NI + D ++P E Sbjct: 121 SAIGSEKYVYKLAWLDLLRDYLKTLQAQAPQDMVICGDFNIALEDRDIHDPQGRETQVMA 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 T RQ+ Q + ++GF D R +S+WDY A S+ +++G RIDH+ L+ + Sbjct: 181 TDTERQALQAILDLGFADGFRKFTAEGGHFSWWDYRAGSFRRDRGWRIDHLYLNQSLYAK 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 + ID PR +PSDHTPVI+ L Sbjct: 241 AVACTIDKTPRHNPQPSDHTPVILEL 266 >gi|269218059|ref|ZP_06161913.1| exodeoxyribonuclease III [Actinomyces sp. oral taxon 848 str. F0332] gi|269212994|gb|EEZ79334.1| exodeoxyribonuclease III [Actinomyces sp. oral taxon 848 str. F0332] Length = 263 Score = 193 bits (489), Expect = 3e-47, Method: Composition-based stats. Identities = 76/264 (28%), Positives = 123/264 (46%), Gaps = 8/264 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+NSIRAR A ++ + D++ LQETK FP ++ Y + G Sbjct: 1 MRIATWNINSIRARHERALAVLERWDLDVLLLQETKCRPDQFPAAEFEAAGYEVAAHGLD 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLD----VQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +NGVAILS+ E+ G + + + + +LY+P+G + Sbjct: 61 QWNGVAILSRVGIEEVTVGFEGQPAFGKEGAEPKVEARAIGARCGGVGVWSLYVPNGRAL 120 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL 177 Y K+ ++ R A +L + AGD+N++P D ++P ++ + + Sbjct: 121 DDPHYPYKLEFLAALRRAAGAQLAEDSSAQLLLAGDWNVVPSDADVWDPELFRGELYASD 180 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 R++F + GF + R T Y+FWDY + KN+G+RID SP + Sbjct: 181 PEREAFHAFADAGFAEVTRGA--TEAPYTFWDYQRLRFPKNEGMRIDFAWASPALAGRVA 238 Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261 +A ID R SDH PV+V L Sbjct: 239 AAHIDRNERKGKGASDHVPVVVEL 262 >gi|114327927|ref|YP_745084.1| exodeoxyribonuclease III [Granulibacter bethesdensis CGDNIH1] gi|114316101|gb|ABI62161.1| exodeoxyribonuclease III [Granulibacter bethesdensis CGDNIH1] Length = 259 Score = 193 bits (489), Expect = 3e-47, Method: Composition-based stats. Identities = 104/259 (40%), Positives = 139/259 (53%), Gaps = 3/259 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 V +ATWNVNSIR R ++ +W++ N PDI+ LQE K E FP + L Y E GQK Sbjct: 3 VKIATWNVNSIRQREGHVLSWLERNQPDILLLQEIKCETAAFPAQAFAKLGYQAEAVGQK 62 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVA+LS+ LPG D +NT IGNLYLP+GN Sbjct: 63 AYNGVAVLSRVPFEVTQRTLPGLPPDDAQARYIEIRALNTI---IGNLYLPNGNSGGEAG 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W++ + A+ L E LI AGDYN+ P D + DA E R F Sbjct: 120 YAYKLGWMEHLAQHAASLLAAGEDLILAGDYNVCPTEEDYAPGALPPEDALLRPETRARF 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + L +G TDA+RA + +Y+FWDY A +W +++G+RIDH +LS L A D Sbjct: 180 RSLLWLGLTDAVRAMRPSGQIYTFWDYQAGAWPRDRGLRIDHALLSSRMAERLIEALPDR 239 Query: 244 KPRGWTKPSDHTPVIVSLD 262 R +PSDH PVI+S + Sbjct: 240 MERDQPQPSDHVPVIISFE 258 >gi|91975059|ref|YP_567718.1| exodeoxyribonuclease III (xth) [Rhodopseudomonas palustris BisB5] gi|91681515|gb|ABE37817.1| exodeoxyribonuclease III (xth) [Rhodopseudomonas palustris BisB5] Length = 274 Score = 193 bits (489), Expect = 3e-47, Method: Composition-based stats. Identities = 94/263 (35%), Positives = 144/263 (54%), Gaps = 3/263 (1%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64 +AT+N+N++ R+ NL W++ PDI+CLQE K E + FP + L Y+ GQK+ Sbjct: 15 KIATFNINNVNKRLPNLLQWLRAAKPDIVCLQELKAEQRKFPEQALHDAGYNAAWVGQKT 74 Query: 65 YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124 +NGVAIL++ + + + + +G +Y P+GNP K+ Sbjct: 75 WNGVAILARKRSLIVT---QTKLPGDADDQQARYIEAAIGGILVGCVYAPNGNPQPGPKF 131 Query: 125 DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ 184 DDKISW+KR R A + L P++ AGD+N+ P D Y W DA E R+++ Sbjct: 132 DDKISWMKRLNRHAGKLLASGAPVVIAGDFNVAPTALDIYPTKSWNEDALIQPESRRAYA 191 Query: 185 KLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK 244 KL G+TDA+RA H +Y+FW Y+ + + ++ G+R+DH+++SPE S L +A +D Sbjct: 192 KLLGQGWTDAVRALHPDQRVYTFWTYWRNRFERDDGLRLDHLLVSPELASRLFAAGVDRA 251 Query: 245 PRGWTKPSDHTPVIVSLDIPEPR 267 R SDH P + L P PR Sbjct: 252 VRAREGASDHAPAWIVLKAPSPR 274 >gi|148255197|ref|YP_001239782.1| exodeoxyribonuclease III [Bradyrhizobium sp. BTAi1] gi|146407370|gb|ABQ35876.1| Exodeoxyribonuclease III [Bradyrhizobium sp. BTAi1] Length = 256 Score = 193 bits (489), Expect = 3e-47, Method: Composition-based stats. Identities = 93/258 (36%), Positives = 141/258 (54%), Gaps = 3/258 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+N+N++R R+ NL +W++ PDI+CLQE K FP + + + Y GQK Sbjct: 1 MKIATFNINNVRRRLPNLLSWLRSARPDIVCLQELKCAQAEFPADAIATAGYGAVWQGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 ++NGVAIL++ ++ A + + IG LYLP+GNP K Sbjct: 61 TWNGVAILARKAEPVLIR---TALPGAPADKEARYIEAAVRGIVIGCLYLPNGNPQPGPK 117 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 +D K++W KR R A+ +E + P++ AGDYN+ P P D Y W DA R +F Sbjct: 118 FDYKLAWFKRLHRHAADFIEHDLPVVLAGDYNVAPTPLDIYPTRSWNKDALIQPSSRAAF 177 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + L + G+ DAIR H +++FWDY + W ++ G+R+DH++LSP+ L A ID Sbjct: 178 KALLDQGWCDAIRTLHPDQPMFTFWDYKRNRWPRDAGLRLDHLLLSPQLAPRLTKAGIDR 237 Query: 244 KPRGWTKPSDHTPVIVSL 261 RG SDH P + L Sbjct: 238 AIRGEAGASDHAPAWIVL 255 >gi|192292098|ref|YP_001992703.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris TIE-1] gi|192285847|gb|ACF02228.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris TIE-1] Length = 256 Score = 193 bits (489), Expect = 3e-47, Method: Composition-based stats. Identities = 93/259 (35%), Positives = 143/259 (55%), Gaps = 3/259 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+NVN++ R+ L AW+K PD++CLQE K D +FP L+ Y GQK Sbjct: 1 MKIATFNVNNVNKRLPVLLAWLKTARPDVVCLQELKAADTDFPEAALRKAGYAAAWAGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 S+NGVAIL++ + I + + + +G LY P+GNP K Sbjct: 61 SWNGVAILARRREIVVTRRRLPGAPHDKQS---RYIEAAVAGIIVGCLYAPNGNPQPGPK 117 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 +DDK++W+KR R A+ L+ P++ AGD+N++P P D Y W+ DA E R+ F Sbjct: 118 FDDKLAWLKRLNRHAATLLKSGAPVVLAGDFNVVPTPADIYPGKSWDKDALVQPEPRKLF 177 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 L G+TDA+R +H Y+FW Y+ + + ++ G+RIDH++L P + L A +D Sbjct: 178 AALLRQGWTDALRHSHPEDAPYTFWSYWRNRFERDAGLRIDHLLLDPSLAARLKRAGVDR 237 Query: 244 KPRGWTKPSDHTPVIVSLD 262 K R + SDH P V ++ Sbjct: 238 KVRAAPEASDHAPAWVVIE 256 >gi|89897437|ref|YP_520924.1| hypothetical protein DSY4691 [Desulfitobacterium hafniense Y51] gi|219670588|ref|YP_002461023.1| exodeoxyribonuclease III Xth [Desulfitobacterium hafniense DCB-2] gi|89336885|dbj|BAE86480.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219540848|gb|ACL22587.1| exodeoxyribonuclease III Xth [Desulfitobacterium hafniense DCB-2] Length = 250 Score = 193 bits (489), Expect = 3e-47, Method: Composition-based stats. Identities = 66/260 (25%), Positives = 112/260 (43%), Gaps = 13/260 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + ++ DI CLQETK +++ PF+ L+ + + + Sbjct: 1 MKLISWNVNGLRACLNKGFMDFFQQEQADIFCLQETKLQEEQIPFQ-LEGYHAYWNFAQK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G A+ +K +P+ + + ++ D + R I F + Sbjct: 60 KGYSGTAVFAKKEPLSVSYGIGQEEHDQEGRVITLEFDTFYLVTVYTPNSQRDLARLDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + LE +P+I GD N+ D NP +A FT E R Sbjct: 120 M------IWEAEFLGYLKNLEKSKPVILCGDLNVAHTEIDLKNPKTNRKNAGFTDEERAK 173 Query: 183 FQKLQNMGFTDAIRATHDTHHL-YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L GF D R + Y++W Y ++ + N G RID+ +S + L A I Sbjct: 174 FSELLKNGFIDTFRHFNPDKKEAYTWWSYMFNARANNAGWRIDYFCVSESLKNELKDAMI 233 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 + G SDH PV + + Sbjct: 234 YDQIMG----SDHCPVGLEI 249 >gi|220933300|ref|YP_002512199.1| exodeoxyribonuclease III Xth [Thioalkalivibrio sp. HL-EbGR7] gi|219994610|gb|ACL71212.1| exodeoxyribonuclease III Xth [Thioalkalivibrio sp. HL-EbGR7] Length = 261 Score = 193 bits (489), Expect = 3e-47, Method: Composition-based stats. Identities = 78/269 (28%), Positives = 124/269 (46%), Gaps = 13/269 (4%) Query: 4 VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + T N N IR A W+K+ + D++C+QETK ++ ET Y Sbjct: 1 MRIITLNANGIRSAARKGFFDWLKQQDADVVCIQETKAQEHQLGDETFWPQGYFTYYHDA 60 Query: 62 -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GVA+ + +P I+T L ++ D + R+IEA F L + +LYLP G+ Sbjct: 61 EKKGYSGVALFCRSEPDRIITGLGSEEFDQEGRYIEAQFG----KLSVISLYLPSGSSSE 116 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 K ++ FL I GD+NI +P D N + ++ F E R Sbjct: 117 ER-QAAKFRFMDLFLDHMRALRRKRREYIVCGDWNIAHKPIDLKNWKSNQKNSGFLPEER 175 Query: 181 QSFQK-LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 +G+ DA R + Y++W +W+KN G R+D+ ++SP + SA Sbjct: 176 AWLDTLFDELGWVDAFRVVNTEPDQYTWWSNRGQAWAKNVGWRLDYQVVSPGLRDKIRSA 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268 I T+ R SDH P+ + D+P P Sbjct: 236 SIYTEQR----FSDHAPLSMDYDLPFPPD 260 >gi|126668281|ref|ZP_01739241.1| exonuclease III [Marinobacter sp. ELB17] gi|126627307|gb|EAZ97944.1| exonuclease III [Marinobacter sp. ELB17] Length = 270 Score = 193 bits (489), Expect = 3e-47, Method: Composition-based stats. Identities = 87/271 (32%), Positives = 134/271 (49%), Gaps = 11/271 (4%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 ++ ++NVNSIR R+H LAA I++ PD I LQETK D++FP +++L YH+ GQ Sbjct: 1 MM-FVSFNVNSIRTRLHQLAAVIEQLEPDFIGLQETKVSDEDFPLADIEALGYHVHFHGQ 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K++ GVA++SK P ++ P D + Q R I A FT+N +TL + N Y P G Sbjct: 60 KTHYGVALMSKMAPDKVYKGFPDDLDNAQRRLITADFTVNGETLTVINGYFPQGESRDHP 119 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175 K+ K + + + + ++ GD NI P D + F Sbjct: 120 VKFPAKQKFYADLMSYLDELKLRNTKVVVMGDVNISPTDKDIGIGADNAKRWLRSGKCSF 179 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232 E RQ ++++ G+TD R H +S++DY + + + +G+RID IM S Sbjct: 180 LPEERQWLGEVESRGYTDVFRHLHPHEADTFSWFDYRSKGFDREPKRGLRIDLIMASDNL 239 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 S SA + R +PSDH PV + Sbjct: 240 LSQAKSAGVSYDVRAMDRPSDHAPVWARFTL 270 >gi|325960168|ref|YP_004291634.1| exodeoxyribonuclease iii Xth [Methanobacterium sp. AL-21] gi|325331600|gb|ADZ10662.1| exodeoxyribonuclease III Xth [Methanobacterium sp. AL-21] Length = 257 Score = 193 bits (489), Expect = 3e-47, Method: Composition-based stats. Identities = 65/263 (24%), Positives = 112/263 (42%), Gaps = 12/263 (4%) Query: 1 MSVVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HI 57 M + + +WNVN IRA W PDI+C+QETK K FP + Y ++ Sbjct: 1 MDKIRILSWNVNGIRAVHKKGFLDWFNNEKPDILCIQETKAVRKQFPPDIRAVDGYQLYV 60 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 +K Y+G A + +P + + D + R + + + N+Y P+G Sbjct: 61 SEASRKGYSGTATYTSLKPEGVKYGFGVEKFDTEGRTLITDYG----DFVLFNIYFPNGK 116 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 D K+ + FL +A + + + ++ GD N + D +P + F Sbjct: 117 MSKER-LDYKMEFYDTFLEYADELKDQGKNIVVCGDVNTAHREIDLAHPKENSKISGFLP 175 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 E R KL + G+ D R + Y++W Y + +N G R+D+ ++ + + Sbjct: 176 EERAWIDKLLDHGYVDTFREFNQEPEEYTWWSYRTRARERNVGWRLDYFFVNRDFMKNVS 235 Query: 238 SARIDTKPRGWTKPSDHTPVIVS 260 +A I + G SDH PV + Sbjct: 236 AAYILPEVMG----SDHCPVGID 254 >gi|255974862|ref|ZP_05425448.1| exonuclease III [Enterococcus faecalis T2] gi|255967734|gb|EET98356.1| exonuclease III [Enterococcus faecalis T2] Length = 257 Score = 193 bits (489), Expect = 3e-47, Method: Composition-based stats. Identities = 77/263 (29%), Positives = 116/263 (44%), Gaps = 13/263 (4%) Query: 2 SVVTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 S + +WNVN +RA + N E + D CLQETK + E L + + Sbjct: 5 STMKCISWNVNGLRAVVKKNFMDVFNELDADFFCLQETKLQAGQIDLE-LPGYHQYWNYA 63 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+G AI +K + + + L + D + R I + + Sbjct: 64 EKKGYSGTAIFAKEEALSVRYGLGIEAHDQEGRVITLEYPEF-----FMVTCYTPNSQAE 118 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + +++W F + L E+P+I GD N+ Q D N + +A FT E R Sbjct: 119 LKRLAYRMTWEDAFRAY-LNELNQEKPVILCGDLNVAHQKIDLKNWKTNQKNAGFTPEER 177 Query: 181 QSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 Q F +L + GFTD R + +YS+W Y ++ N G RID+ ++S L SA Sbjct: 178 QKFTELLDSGFTDTFRYFYPEAEGIYSWWSYRFNARKNNAGWRIDYFVVSESLNERLVSA 237 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 +I T G SDH PV V LD Sbjct: 238 KIHTDILG----SDHCPVEVVLD 256 >gi|256763359|ref|ZP_05503939.1| exonuclease III [Enterococcus faecalis T3] gi|256684610|gb|EEU24305.1| exonuclease III [Enterococcus faecalis T3] Length = 257 Score = 193 bits (489), Expect = 3e-47, Method: Composition-based stats. Identities = 77/263 (29%), Positives = 116/263 (44%), Gaps = 13/263 (4%) Query: 2 SVVTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 S + +WNVN +RA + N E + D CLQETK + E L + + Sbjct: 5 STMKCISWNVNGLRAVVKKNFMDVFNELDADFFCLQETKLQAGQIDLE-LPGYHQYWNYA 63 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+G AI +K + + + L + D + R I + + Sbjct: 64 EKKGYSGTAIFAKEEALSVRYGLGIESHDQEGRVITLEYPEF-----FMVTCYTPNSQAE 118 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + +++W F + L E+P+I GD N+ Q D N + +A FT E R Sbjct: 119 LKRLAYRMTWEDAFRAY-LNELNQEKPVILCGDLNVAHQKIDLKNWKTNQKNAGFTPEER 177 Query: 181 QSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 Q F +L + GFTD R + +YS+W Y ++ N G RID+ ++S L SA Sbjct: 178 QKFTELLDSGFTDTFRYFYPEAEGIYSWWSYRFNARKNNAGWRIDYFVVSESLNERLVSA 237 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 +I T G SDH PV V LD Sbjct: 238 KIHTDILG----SDHCPVEVVLD 256 >gi|255971866|ref|ZP_05422452.1| exonuclease III [Enterococcus faecalis T1] gi|255962884|gb|EET95360.1| exonuclease III [Enterococcus faecalis T1] Length = 257 Score = 193 bits (489), Expect = 3e-47, Method: Composition-based stats. Identities = 77/263 (29%), Positives = 116/263 (44%), Gaps = 13/263 (4%) Query: 2 SVVTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 S + +WNVN +RA + N E + D CLQETK + E L + + Sbjct: 5 STMKCISWNVNGLRAVVKKNFMDVFNELDADFFCLQETKLQAGQIDLE-LPGYHQYWNYA 63 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+G AI +K + + + L + D + R I + + Sbjct: 64 EKKGYSGTAIFAKEEALSVRYGLGIEAHDQEGRVITLEYPEF-----FMVTCYTPNSQAE 118 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + +++W F + L E+P+I GD N+ Q D N + +A FT E R Sbjct: 119 LKRLAYRMTWEDAFRAY-LNELNQEKPVILCGDLNVAHQNIDLKNWKTNQKNAGFTPEER 177 Query: 181 QSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 Q F +L + GFTD R + +YS+W Y ++ N G RID+ ++S L SA Sbjct: 178 QKFTELLDSGFTDTFRYFYPEAEGIYSWWSYRFNARKNNAGWRIDYFVVSESLNERLVSA 237 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 +I T G SDH PV V LD Sbjct: 238 KIHTDILG----SDHCPVEVVLD 256 >gi|319902391|ref|YP_004162119.1| exodeoxyribonuclease III Xth [Bacteroides helcogenes P 36-108] gi|319417422|gb|ADV44533.1| exodeoxyribonuclease III Xth [Bacteroides helcogenes P 36-108] Length = 267 Score = 193 bits (489), Expect = 4e-47, Method: Composition-based stats. Identities = 80/261 (30%), Positives = 138/261 (52%), Gaps = 12/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60 + + T+NVN +RA + W+ + PD++CLQETK + + +P + L SL Y ++ + Sbjct: 14 MKIITYNVNGLRAAVTKGFPEWLAQEQPDVLCLQETKLQPEQYPADALDSLGYKHYLYSA 73 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GVAIL+K +P + + ++ D + RF+ A + L I ++Y P G Sbjct: 74 RKKGYSGVAILAKREPDRVEYGMGMEEYDSEGRFLRADYD----DLSIVSVYHPSG-TSG 128 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K+ W+++F + + LI GDYNI +P D ++PI ++ F E R Sbjct: 129 DERQAFKMVWLEKFQEYVLELQRTRPKLILCGDYNICHEPIDIHDPIRNATNSGFLPEER 188 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + + + GFTD+ R H Y++W Y +S ++NKG RID+ M++ +L AR Sbjct: 189 EWMTRFLDAGFTDSFRFLHPDKQEYTWWSYRFNSRARNKGWRIDYCMVNEPVRPMLKDAR 248 Query: 241 IDTKPRGWTKPSDHTPVIVSL 261 I SDH P+++ + Sbjct: 249 ILNDA----VHSDHCPMLLEI 265 >gi|170759835|ref|YP_001786903.1| exodeoxyribonuclease III [Clostridium botulinum A3 str. Loch Maree] gi|169406824|gb|ACA55235.1| exodeoxyribonuclease III [Clostridium botulinum A3 str. Loch Maree] Length = 253 Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats. Identities = 69/262 (26%), Positives = 115/262 (43%), Gaps = 12/262 (4%) Query: 4 VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + +WNVN +RA N WI E +PDI+C+QETK ++ Y+ Sbjct: 1 MRIYSWNVNGLRAVAKKNFIEWIGEESPDILCIQETKLQENQLEDNIKNIDGYYSYFSFA 60 Query: 62 -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GVA +K +PI + + + D + R + F + N+Y P+G Sbjct: 61 AKKGYSGVATYTKVKPISVKHSMGIEKFDSEGRILITEFK----NFTLLNIYFPNGQ-RD 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K+ + + + + ++ + L+ GDYN D NP E + F R Sbjct: 116 EERLQYKLDFYEALFNYCDELVKEGKKLVICGDYNTAHNEIDLKNPKANEKTSGFLRIER 175 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 K+ G+TD R + YS+W Y + +N G RID+ +S + + Sbjct: 176 DWLDKIIERGYTDTFRNMNPDKIKYSWWSYRFKARERNAGWRIDYHFVSNNLLDRVENTE 235 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I + G SDH PV++ L Sbjct: 236 ILNEVYG----SDHCPVMLELK 253 >gi|256827574|ref|YP_003151533.1| exodeoxyribonuclease III [Cryptobacterium curtum DSM 15641] gi|256583717|gb|ACU94851.1| exodeoxyribonuclease III [Cryptobacterium curtum DSM 15641] Length = 262 Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats. Identities = 67/267 (25%), Positives = 112/267 (41%), Gaps = 12/267 (4%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + D+ LQETK ++ E H + Sbjct: 1 MRLVSWNVNGLRAAEKKGFSDIFTSLKADVFALQETKLQEGQIDLE-FPDYESHWSYAER 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITS 121 K Y+G A+ ++ +P++++ L LD + R F + N Sbjct: 60 KGYSGTAVYARQKPLQVLHGLGVPHLDTEGRICALEFPEFWFVDVYTPNAQNELARIDHR 119 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLI----FAGDYNIIPQPHDCYNPIIWENDACFTL 177 ++DD + L + L + GD+N+ + D NP +A F+ Sbjct: 120 MEWDDAFRDFCKGLEKGTTPLGPDTAQPKPVIMCGDFNVAHEEIDLKNPKSNRGNAGFSD 179 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 E R+ F KL + GF D R + T YS+W Y ++ + N G RID+ ++S + Sbjct: 180 EEREKFTKLLDAGFVDTFRLLNPTEVGAYSWWSYRFNARANNAGWRIDYFLVSKSLADRV 239 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263 +ARI G SDH PV + +D+ Sbjct: 240 RAARIHADLFG----SDHCPVSLDIDL 262 >gi|317476209|ref|ZP_07935460.1| exodeoxyribonuclease III [Bacteroides eggerthii 1_2_48FAA] gi|316907620|gb|EFV29323.1| exodeoxyribonuclease III [Bacteroides eggerthii 1_2_48FAA] Length = 254 Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats. Identities = 80/261 (30%), Positives = 136/261 (52%), Gaps = 12/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60 + + T+NVN +RA + L W+ PD++CLQETK + + +P E L +L Y ++ + Sbjct: 1 MKIITYNVNGLRAAVTKGLPEWLANEQPDVLCLQETKLQPEQYPAEALDALGYKHYLYSA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GVAIL+K +P + + ++ D + RF+ A + L I ++Y P G Sbjct: 61 RKKGYSGVAILTKREPDHVEYGMGMEEYDSEGRFMRADYG----DLSIVSVYHPSG-TSG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K+ W+++F ++ + LI GDYNI + D ++P+ ++ F E R Sbjct: 116 DERQAFKMVWLEKFRQYVVELQRTRPKLILCGDYNICHEAIDIHDPVRNATNSGFLPEER 175 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + + N GF D R H Y++W Y +S +KNKG RID+ M++ +L AR Sbjct: 176 EWMTRFLNEGFIDTFRLLHPDKQEYTWWSYRFNSRAKNKGWRIDYCMVNESVRPMLKDAR 235 Query: 241 IDTKPRGWTKPSDHTPVIVSL 261 I SDH P+++ + Sbjct: 236 ILNDA----VHSDHCPMMLEI 252 >gi|307942540|ref|ZP_07657888.1| exodeoxyribonuclease III [Roseibium sp. TrichSKD4] gi|307774179|gb|EFO33392.1| exodeoxyribonuclease III [Roseibium sp. TrichSKD4] Length = 269 Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats. Identities = 79/267 (29%), Positives = 124/267 (46%), Gaps = 9/267 (3%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETC 60 + + + TWN+NS+R R+ + + E PD++CLQETK D NFP + ++ Y HI Sbjct: 3 NRLKLVTWNINSVRLRMPIVERLLAEVQPDVLCLQETKCPDANFPEKAFKAAGYNHIAIN 62 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 GQK Y+GVA +S+ + +R I + Q +R+ N Y+P G Sbjct: 63 GQKGYHGVATVSRLPLSNVEKREFCQMG--DSRHIAVDVELAGQAVRVHNFYVPAGGDEP 120 Query: 121 STKYDDKISWIKRFLRFASQRLELE---EPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + +DK +F+ L +P + GD N+ P HD ++ T Sbjct: 121 DPEKNDKFDHKLKFMNEMKNWLTGPETAKPAVLVGDLNVAPYEHDVWSHKQLLKVVSHTP 180 Query: 178 EVRQSFQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATS 234 + F+ ++ + T LY++W Y A WSK +KG R+DH+ +S S Sbjct: 181 IETELFEAVRESGNWLDAMRQFTPMEEKLYTWWSYRAKDWSKADKGRRLDHVWVSDPLKS 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261 + S + RGW KPSDH PV+ Sbjct: 241 AIKSTEVLRDARGWEKPSDHAPVVADF 267 >gi|153812982|ref|ZP_01965650.1| hypothetical protein RUMOBE_03389 [Ruminococcus obeum ATCC 29174] gi|149830929|gb|EDM86019.1| hypothetical protein RUMOBE_03389 [Ruminococcus obeum ATCC 29174] Length = 252 Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats. Identities = 72/262 (27%), Positives = 111/262 (42%), Gaps = 13/262 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN IRA I +E + DI CLQETK + E L + + + Sbjct: 1 MKCISWNVNGIRACITKGFEDRFRELDADIFCLQETKCQQGQVELE-LPGYHQYWNYANR 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 + Y+G A+ +K +PI + + ++ D + R I F + Sbjct: 60 RGYSGTAVFTKKEPISVKNGIGIEEHDKEGRVITLEFKEFYFVTVYTPNSQSELRRLEYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 +R +L+ +P+I GD N+ + D NP +A FT E R Sbjct: 120 M------EWERDFLAYLLKLQESKPVICCGDLNVAHEEIDLKNPKTNRKNAGFTDEERAC 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F K+ GF D R + +YS+W Y + KN G RID+ + SP L A I Sbjct: 174 FTKVLESGFIDTFRYFYPDKEGIYSWWSYRFKAREKNAGWRIDYFITSPSLKEKLQGAAI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 T+ G SDH P+ + +D+ Sbjct: 234 HTEIMG----SDHCPIELDIDL 251 >gi|300870922|ref|YP_003785793.1| exodeoxyribonuclease [Brachyspira pilosicoli 95/1000] gi|300688621|gb|ADK31292.1| exodeoxyribonuclease [Brachyspira pilosicoli 95/1000] Length = 261 Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats. Identities = 69/265 (26%), Positives = 106/265 (40%), Gaps = 9/265 (3%) Query: 1 MSVVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 MS + + +WNVN IRA L +IK+ + DIICLQETK ++ P + Y + Sbjct: 1 MSTLKIISWNVNGIRAAYKKGLLDFIKKEDADIICLQETKAFEEQLPEDLRNIEGYQLFI 60 Query: 60 CGQKS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 G + ++ Y ++ + + I N+Y P+G Sbjct: 61 NPADPEIRKGYSGVAIYTKLKPNKEIKNKFGSKFTDREGRILALEFDDFTIFNVYFPNGG 120 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + + +L+ + +I GD NI + D P E F Sbjct: 121 KSEEHF--NYKLSFYDEMTKHMIKLKDKTNVILCGDMNIAHEAIDLARPKENEKSIGFLP 178 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 R+ K N GFTD R YS+WD S KN G RID+ ++ E ++ + Sbjct: 179 IERERITKFLNSGFTDTFRMFVKEGGHYSWWDMKTRSREKNVGWRIDYFFVNNEISNNIK 238 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLD 262 A I T G SDH P+++ D Sbjct: 239 RADILTDVLG----SDHCPILIEWD 259 >gi|254518588|ref|ZP_05130644.1| exodeoxyribonuclease III Xth [Clostridium sp. 7_2_43FAA] gi|226912337|gb|EEH97538.1| exodeoxyribonuclease III Xth [Clostridium sp. 7_2_43FAA] Length = 251 Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats. Identities = 70/262 (26%), Positives = 119/262 (45%), Gaps = 13/262 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN IR+ + + KE + DI C+QE+K ++ E L+ + + + Sbjct: 1 MKLISWNVNGIRSCVTKGFLEYFKEMDADIFCIQESKLQEGQIDLE-LEGYHQYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +P+ + L ++ D + R I F + Sbjct: 60 KGYSGTAIFTKEKPLSVSYGLGIEEHDKEGRVITLEFENFYMVTVYTPNSKNELARLDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + R + L+ ++P+I GD N+ + D NP +A FT E R Sbjct: 120 M------VWEDAFRDYLKVLDEKKPVIVCGDLNVAHKEIDLKNPKTNLRNAGFTEEERSK 173 Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L N GF D R + YS+W Y ++ +KN G RID+ ++S L A+I Sbjct: 174 FTELLNAGFVDTFRYFYPDEVGAYSWWSYRFNARAKNAGWRIDYFLVSNSVKDKLEDAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 ++ G SDH PV + +++ Sbjct: 234 HSEVLG----SDHCPVELKINL 251 >gi|71892211|ref|YP_277944.1| exonuclease III [Candidatus Blochmannia pennsylvanicus str. BPEN] gi|71796317|gb|AAZ41068.1| exonuclease III [Candidatus Blochmannia pennsylvanicus str. BPEN] Length = 268 Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats. Identities = 84/268 (31%), Positives = 120/268 (44%), Gaps = 8/268 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR+H L A I + PD+I LQET+ D FP + + YH+ GQK Sbjct: 1 MKFVSFNINGLRARMHQLNAIIFQLKPDVIGLQETRVHDDFFPVKEILQHGYHVYYYGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122 Y+GVA+ + P+ + L DD Q R I A TL I N Y P G Sbjct: 61 KYHGVALFLRQTPLTVTRGLTDDDNLSQKRIIMADIMTPIGTLTIINGYFPQGENKNHPE 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACFT 176 K+ K ++ K F + L+ GD NI P D I F Sbjct: 121 KFMYKKNFYKSFQNYVEHTYHSHSLLLIMGDMNISPTDFDIGIGEKNKKRWIASGRCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHL-YSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R +L + G D R H + YS++ Y + + KN G+RID I+ + + Sbjct: 181 PEERTWINRLMSWGLVDIYRNMHPQNDERYSWFSYRSHGFYKNNGLRIDLILATRPLANR 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 ++ I R +PSDH PV V DI Sbjct: 241 CKNSDISYDIRRMQRPSDHAPVWVDFDI 268 >gi|262067405|ref|ZP_06027017.1| exodeoxyribonuclease III [Fusobacterium periodonticum ATCC 33693] gi|291378968|gb|EFE86486.1| exodeoxyribonuclease III [Fusobacterium periodonticum ATCC 33693] Length = 253 Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats. Identities = 77/261 (29%), Positives = 114/261 (43%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN IRA I + E N DI CLQETK E L+ + + + Sbjct: 1 MKLISWNVNGIRAAIKKGFLDYFNEQNADIFCLQETKLSAGQLDLE-LKGYHQYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +P+ + L ++ D + R I F + Sbjct: 60 KGYSGTAIFTKEEPLSVSYGLGIEEHDKEGRVITLEFEKFYMITVYTPNSKDELQRLDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + R + LE ++P++ GD N+ + D NP +A FT E R Sbjct: 120 M------VWEDEFRKYLKNLEKKKPVVVCGDLNVAHKEIDLKNPKTNRRNAGFTDEERGK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L GFTD R + H YS+W Y A++ N G RID+ ++S L A I Sbjct: 174 FTELLESGFTDTFRYFYPDLEHAYSWWSYRANARKNNTGWRIDYFIVSKALDKYLVDAEI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 + G SDH PV++ LD Sbjct: 234 HAQTEG----SDHCPVVLFLD 250 >gi|326795198|ref|YP_004313018.1| exodeoxyribonuclease III [Marinomonas mediterranea MMB-1] gi|326545962|gb|ADZ91182.1| exodeoxyribonuclease III [Marinomonas mediterranea MMB-1] Length = 268 Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats. Identities = 84/267 (31%), Positives = 122/267 (45%), Gaps = 9/267 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V ++N+N +RAR H +AA ++++ PD+I LQE K D FP E + +YH GQK Sbjct: 1 MKVISFNINGLRARPHQIAALVEKHQPDVIGLQEIKVHDDAFPKEIPEEHSYHAYYYGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 S+ GVAI SK + P D+ D Q R I ATF +++ N Y P G Sbjct: 61 SHYGVAIFSKQPATSVEYGFPTDEEDAQRRMIIATFDTENGPVKVINGYFPQGESRDHET 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACFTL 177 L +E +I GD NI P D + F Sbjct: 121 KFPAKRKFYADLMAYLASHSKDEKIIVMGDVNISPTDLDIGIGEKNAKRWLKTGKCSFLP 180 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHL-YSFWDYYADSWSK--NKGIRIDHIMLSPEATS 234 E R+ F L + GF D R+ + + +S++DY + + +G+RID I+ S + Sbjct: 181 EEREWFDALLDWGFVDTYRSQNPESNELFSWFDYRSKGFEDTPKRGLRIDVILASNGLIN 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261 L + ID RG KPSDH P+ S Sbjct: 241 QLEATGIDYDIRGIEKPSDHAPIWASF 267 >gi|218130897|ref|ZP_03459701.1| hypothetical protein BACEGG_02492 [Bacteroides eggerthii DSM 20697] gi|217987241|gb|EEC53572.1| hypothetical protein BACEGG_02492 [Bacteroides eggerthii DSM 20697] Length = 254 Score = 192 bits (488), Expect = 4e-47, Method: Composition-based stats. Identities = 80/261 (30%), Positives = 136/261 (52%), Gaps = 12/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60 + + T+NVN +RA + L W+ PD++CLQETK + + +P E L +L Y ++ + Sbjct: 1 MKIITYNVNGLRAAVTKGLPEWLANEQPDVLCLQETKLQPEQYPAEALDALGYKHYLYSA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GVAIL+K +P + + ++ D + RF+ A + L I ++Y P G Sbjct: 61 RKKGYSGVAILTKREPDHVEYGMGMEEYDSEGRFMRADYG----DLSIVSVYHPSG-TSG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K+ W+++F ++ + LI GDYNI + D ++P+ ++ F E R Sbjct: 116 DERQAFKMVWLEKFRQYVVELQRTRPKLILCGDYNICHEAIDIHDPVRNATNSGFLPEER 175 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + + N GF D R H Y++W Y +S +KNKG RID+ M++ +L AR Sbjct: 176 EWMTRFLNEGFIDTFRLLHPDKQEYTWWSYRFNSRAKNKGWRIDYCMVNEPVRPMLKDAR 235 Query: 241 IDTKPRGWTKPSDHTPVIVSL 261 I SDH P+++ + Sbjct: 236 ILNDA----VHSDHCPMMLEI 252 >gi|110639863|ref|YP_680073.1| exodeoxyribonuclease III [Cytophaga hutchinsonii ATCC 33406] gi|110282544|gb|ABG60730.1| exodeoxyribonuclease III [Cytophaga hutchinsonii ATCC 33406] Length = 254 Score = 192 bits (488), Expect = 5e-47, Method: Composition-based stats. Identities = 81/261 (31%), Positives = 124/261 (47%), Gaps = 12/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60 + + T+NVN IRA I L W+K N D++C QE K F E+ ++L Y + Sbjct: 1 MKIITYNVNGIRAAITKGLLTWVKATNADVLCFQEIKASVDQFDVESFKALGYTTYAFPA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GVAI +K P+ + + D + R I A + + N+Y+P G+ Sbjct: 61 QKKGYSGVAICTKEIPVHVEYGCGIEKYDFEGRVIRADYPT----FSVMNVYMPSGS-SG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K W+ FL + S+ + LI GDYNI + D +NP + F E R Sbjct: 116 DDRQAFKFGWMDDFLLYISEVRKKIPNLIVCGDYNICHKAIDIHNPKSNAKTSGFLPEER 175 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + K + GF DA R ++ H Y++W Y A S KN G RID+ ++ E L + Sbjct: 176 EWMSKFFDSGFVDAFRHFNEEPHHYTWWSYRAGSRGKNLGWRIDYHSVTQEMVGKLKRSV 235 Query: 241 IDTKPRGWTKPSDHTPVIVSL 261 I SDH PV++ + Sbjct: 236 ILPDA----IHSDHCPVLLEI 252 >gi|238897851|ref|YP_002923530.1| exonuclease III [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229465608|gb|ACQ67382.1| exonuclease III [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 268 Score = 192 bits (487), Expect = 5e-47, Method: Composition-based stats. Identities = 86/268 (32%), Positives = 131/268 (48%), Gaps = 8/268 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RA H LAA I++++P +I LQETK D FP E ++ YH+ GQK Sbjct: 1 MKFVSFNINGLRAHPHQLAAIIEKHDPHLIGLQETKVHDDMFPLEEVRRHGYHVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122 + GVA+L+K P+ I P D D Q R I A T+ + N Y P G Sbjct: 61 GHYGVALLTKDSPLAIRRGFPTDQEDAQRRIIMADLKTPQGTITVINGYFPQGESRLHPT 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE------NDACFT 176 K+ K + + R+ +Q ++ ++ GD+NI P D F Sbjct: 121 KFPAKARFYEDLHRYLTQHFSVQSHVLIMGDFNICPTDGDIGIGEQNRKRWLSSGKCAFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R F+ LQ+ G D R + H YS++DY + + +N+G+RID ++ S L Sbjct: 181 PEERAWFEHLQSWGLIDLFRVAYPDYEHQYSWFDYRSKGFDENRGLRIDLLLASVPLARL 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 ++ ID + RG KPSDH PV + Sbjct: 241 AINSGIDYEIRGMEKPSDHAPVWSEFKL 268 >gi|331085596|ref|ZP_08334680.1| exodeoxyribonuclease [Lachnospiraceae bacterium 9_1_43BFAA] gi|330407483|gb|EGG86985.1| exodeoxyribonuclease [Lachnospiraceae bacterium 9_1_43BFAA] Length = 250 Score = 192 bits (487), Expect = 5e-47, Method: Composition-based stats. Identities = 71/261 (27%), Positives = 115/261 (44%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN IRA + + KE + DI C+QE+K ++ E L+ + + Sbjct: 1 MKFISWNVNGIRACVQKGFLDFFKEADADIFCIQESKMQEGQLKLE-LEGYHQFWNYAER 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +P+ + + ++ D + R I F + Sbjct: 60 KGYSGTAIFTKQEPLSVAYGIGMEEHDKEGRVITLEFEEFYFVTVYTPNSQNELARLDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + ++LE ++P+IF GD N+ + D NP + +A FT E R Sbjct: 120 MQWETEFLKY------LKKLEAKKPVIFCGDLNVAHREIDLKNPKTNQKNAGFTDEERGK 173 Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L + GF D R + +YS+W Y + +KN G RID+ +S L A+I Sbjct: 174 FTELLSAGFIDTFRYFYPEQEGIYSWWSYRFSARAKNAGWRIDYFCVSECLKDRLRDAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 T G SDH PV + + Sbjct: 234 LTDVMG----SDHCPVELDFE 250 >gi|237738747|ref|ZP_04569228.1| exodeoxyribonuclease III [Fusobacterium sp. 2_1_31] gi|294781992|ref|ZP_06747324.1| exodeoxyribonuclease III [Fusobacterium sp. 1_1_41FAA] gi|229423850|gb|EEO38897.1| exodeoxyribonuclease III [Fusobacterium sp. 2_1_31] gi|294481803|gb|EFG29572.1| exodeoxyribonuclease III [Fusobacterium sp. 1_1_41FAA] Length = 253 Score = 192 bits (487), Expect = 5e-47, Method: Composition-based stats. Identities = 76/261 (29%), Positives = 113/261 (43%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN IRA I + E N DI CLQETK E L+ + + + Sbjct: 1 MKLISWNVNGIRAAIKKGFLDYFNEQNADIFCLQETKLSAGQLDLE-LKGYHQYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +P+ + L ++ D + R I F + Sbjct: 60 KGYSGTAIFTKEEPLSVSYGLGIEEHDKEGRVITLEFEKFYMITVYTPNSKDELLRLDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + R + LE ++P++ GD N+ + D NP +A FT E R Sbjct: 120 M------VWEDEFRKYLKNLEKKKPVVVCGDLNVAHKEIDLKNPKTNRRNAGFTDEERGK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L GF D R + H YS+W Y A++ N G RID+ ++S L A I Sbjct: 174 FTELLESGFIDTFRYFYPDLEHAYSWWSYRANARKNNTGWRIDYFVVSKALEKYLVDAEI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 + G SDH PV++ LD Sbjct: 234 HAQTEG----SDHCPVVLFLD 250 >gi|150017217|ref|YP_001309471.1| exodeoxyribonuclease III Xth [Clostridium beijerinckii NCIMB 8052] gi|149903682|gb|ABR34515.1| exodeoxyribonuclease III Xth [Clostridium beijerinckii NCIMB 8052] Length = 254 Score = 192 bits (487), Expect = 5e-47, Method: Composition-based stats. Identities = 70/265 (26%), Positives = 124/265 (46%), Gaps = 13/265 (4%) Query: 1 MSVVTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 M + + +WNVN +RA + + KE + DI C+QE+K ++ E L + Sbjct: 1 MKLKKLISWNVNGLRACVKKGFLEYFKEIDADIFCIQESKLQEGQIDLE-LDGYTSYWNY 59 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G A+ +K +P+ + + ++ D + R + + + N+Y P+ Sbjct: 60 AEKKGYSGTAVFTKEEPLTVKRGIGIEEHDNEGRVLTLEYG----NFYLVNVYTPNSKQ- 114 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + D ++ W R + LE +P+I GD N+ + D NP +A FT E Sbjct: 115 GLERLDYRMVWE-DVFRKYLKELEKNKPVIICGDLNVAHKEIDLKNPTSNRKNAGFTDEE 173 Query: 180 RQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R +L GF D R + +YS+W Y ++ + N G RID+ ++S L Sbjct: 174 RSKISELLEAGFIDTYRYFYPDKEGMYSWWSYRFNARANNAGWRIDYFLVSESLKDKLED 233 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263 A+I + G SDH PV +++++ Sbjct: 234 AKIHMEVTG----SDHCPVELTINL 254 >gi|227505913|ref|ZP_03935962.1| exonuclease III [Corynebacterium striatum ATCC 6940] gi|227197435|gb|EEI77483.1| exonuclease III [Corynebacterium striatum ATCC 6940] Length = 269 Score = 192 bits (487), Expect = 5e-47, Method: Composition-based stats. Identities = 78/267 (29%), Positives = 135/267 (50%), Gaps = 8/267 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+NS+R R+ + +++ D++CLQETK D FP ++ YH+ G Sbjct: 1 MRIATWNINSVRTRVQRAVDLLAKHDIDVLCLQETKVADDKFPVMDFEAAGYHVTHHGLN 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDD-----LDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 +NGVAI+SK +P E+ T PG + + + I +LY+P+G Sbjct: 61 QWNGVAIVSKSEPEEVFTSFPGQPGFAKDPEKPQNLEARAVGARIRGVEIWSLYVPNGRE 120 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 IT Y K+ ++ R+A R + + L+ GD+NI P+ D ++ + T Sbjct: 121 ITDRHYAYKLQFLYALARYAESRAQSK--LLLTGDFNIAPRDEDVWDIEAFRGKTHVTEP 178 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R +FQ L+ G + R + ++++DY + + KN+G+RID + S + + S Sbjct: 179 ERAAFQMLEEAGLEEVTRRFTE-EQRWTYFDYKSLRFQKNEGMRIDFQLASRSLAATVQS 237 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIPE 265 A++D R K SDH ++ D+P+ Sbjct: 238 AQVDMVERAGDKTSDHCLLLADYDLPD 264 >gi|313676472|ref|YP_004054468.1| exodeoxyribonuclease iii [Marivirga tractuosa DSM 4126] gi|312943170|gb|ADR22360.1| exodeoxyribonuclease III [Marivirga tractuosa DSM 4126] Length = 255 Score = 192 bits (487), Expect = 6e-47, Method: Composition-based stats. Identities = 82/264 (31%), Positives = 126/264 (47%), Gaps = 12/264 (4%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC-- 60 + + ++NVN IRA L+ W++E PD+ CLQE K + ++L YHI Sbjct: 1 MNIISYNVNGIRAAERKGLSQWLEEEKPDVFCLQELKANRSDVDLSVFENLGYHIYWHSA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GV I +K +P + D D + R I A F + N Y+P G+ Sbjct: 61 EKKGYSGVGIFTKVKPNNVEIGCNMDIYDREGRVIRADFE----NFSVLNTYMPSGS-SG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + D K+ W+ F + + L+ GDYNI Q D ++P+ +N + F E R Sbjct: 116 DPRQDFKMQWLSDFRAYIQDLKQEIPNLLICGDYNICHQAIDIHDPVRNKNSSGFLPEER 175 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + N GF D+ R + YS+W Y + + +NKG RID+ M+S + L +A Sbjct: 176 EWMTDFLNDGFIDSFRHLNKEPDQYSWWSYRSAARERNKGWRIDYHMISENLKNQLKAAD 235 Query: 241 IDTKPRGWTKPSDHTPVIVSLDIP 264 I K SDH P+ V LD+ Sbjct: 236 ILQDV----KHSDHCPIKVELDVS 255 >gi|291543155|emb|CBL16265.1| exodeoxyribonuclease III [Ruminococcus bromii L2-63] Length = 252 Score = 192 bits (487), Expect = 6e-47, Method: Composition-based stats. Identities = 75/261 (28%), Positives = 122/261 (46%), Gaps = 13/261 (4%) Query: 5 TVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +WNVN +RA + + K+ + DI CLQETK ++ L+ + + +K Sbjct: 3 KLISWNVNGLRACVTKGFENFFKDVDADIFCLQETKLQEGQIDL-LLEGYHQYWCYADKK 61 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 Y+G A+ +K +P+ + + D+ D + R I A F + + Sbjct: 62 GYSGTAMFTKEEPLNVCYGIGIDEHDHEGRVITAEFDNC-----FVVTCYTPNSQSELKR 116 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 D ++ W F + + LE ++P+I GD N+ + D NP +A FT E R Sbjct: 117 LDYRMKWEDDFKAYLKK-LEEKKPVIMCGDLNVAHKEIDLKNPKTNRKNAGFTDEERSKM 175 Query: 184 QKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 L + GF D R + +YS+W Y + KN G RID+ ++S S L A+I Sbjct: 176 TALLDDGFIDTYRYFYPDTEGVYSWWSYRFKAREKNAGWRIDYFIVSKALESKLDGAKIH 235 Query: 243 TKPRGWTKPSDHTPVIVSLDI 263 T+ G SDH PV +++DI Sbjct: 236 TEILG----SDHCPVELTIDI 252 >gi|149909989|ref|ZP_01898638.1| exodeoxyribonuclease III [Moritella sp. PE36] gi|149807003|gb|EDM66962.1| exodeoxyribonuclease III [Moritella sp. PE36] Length = 274 Score = 192 bits (487), Expect = 6e-47, Method: Composition-based stats. Identities = 75/273 (27%), Positives = 128/273 (46%), Gaps = 15/273 (5%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +RAR+H L A I +++PD+I LQE K ++ FP ++ + YH+ GQK Sbjct: 1 MKIISFNINGLRARLHQLQAIIDKHSPDVIGLQEIKVHNEMFPIAAVEDMGYHVFFHGQK 60 Query: 64 SYNGVAILSKYQP------IEIVTHLPGDDLD-VQARFIEATFTINTQTLRIGNLYLPHG 116 ++ GVA++ K I++ P DD + + + + + + + N Y P G Sbjct: 61 AHYGVAMMVKKSTIADVEAIKVQYGFPTDDEEAQKRMIMVTFEQTSGKPITVLNGYFPQG 120 Query: 117 NPITS-TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIW 169 I+ TKY K + + + + E+ LI GD NI P + Sbjct: 121 ENISHETKYPYKRKFYQDLNIYLNDNHTAEDDLIVMGDINISPADKDIGIGEPNAKRWLK 180 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIML 228 F E R+ KLQ G D R YS++DY + + N+G+RID I+ Sbjct: 181 TGKCSFQPEEREWLAKLQGFGLHDTFRTIKPEVSDRYSWFDYRSKGFPDNRGLRIDVILA 240 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + + + + +D + R KPSDH P+ + Sbjct: 241 TATLNAKVVESDVDYELRAIEKPSDHAPIWTTF 273 >gi|237807677|ref|YP_002892117.1| exodeoxyribonuclease III [Tolumonas auensis DSM 9187] gi|237499938|gb|ACQ92531.1| exodeoxyribonuclease III [Tolumonas auensis DSM 9187] Length = 268 Score = 192 bits (487), Expect = 6e-47, Method: Composition-based stats. Identities = 75/267 (28%), Positives = 124/267 (46%), Gaps = 9/267 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +RAR H L A +++++PDII LQETK D FP ++ L Y + GQK Sbjct: 1 MKIISFNINGLRARPHQLQAIVEQHHPDIIGLQETKVHDDAFPVSIIEELGYQVHFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 ++ GVA+LS+ P ++ P D+ + I N + L + N Y P G Sbjct: 61 AHYGVALLSRKTPDAVIKGFPEDDEESQRRLIIGRFMQENGRLLTVFNGYFPQGESRDHP 120 Query: 123 K-YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175 + K + + L + Q +E ++ GD NI + F Sbjct: 121 IKFPAKQKFYRDLLNYLQQNHTPDEDIVIMGDMNISSTDLDIGIGEANRKRWLQTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R+ +L GF D R+ + + +S++DY + + N+G+RID ++ + Sbjct: 181 LPEEREWLNELLAWGFVDTWRSQNPDSNEHFSWFDYRSRGFDDNRGLRIDLLLATSVLQQ 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261 L ID + RG KPSDH P+ Sbjct: 241 RLQQTGIDYEIRGMEKPSDHAPIWAEF 267 >gi|261880757|ref|ZP_06007184.1| exodeoxyribonuclease III [Prevotella bergensis DSM 17361] gi|270332533|gb|EFA43319.1| exodeoxyribonuclease III [Prevotella bergensis DSM 17361] Length = 267 Score = 192 bits (487), Expect = 6e-47, Method: Composition-based stats. Identities = 69/273 (25%), Positives = 118/273 (43%), Gaps = 19/273 (6%) Query: 4 VTVATWNVNSIRARIH------------NLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51 + +WNVN +RA + A+ E + D CLQETK + + Sbjct: 1 MKFVSWNVNGLRACVKPKVDAEGNVISKGFEAYFNELDADFFCLQETKMQAGQLDLQ-FN 59 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGN 110 + +K Y+G AI +K++P+ + + ++ D + R I + + N Sbjct: 60 GYRSYWNYAERKGYSGTAIYTKHEPMNVACGMGIEEHDNEGRVITLEYPEFYLVNVYTPN 119 Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170 + + ++ W + F + + L +P+I GD N+ Q D N Sbjct: 120 SQESLPGEVKPKRLGYRMKWEEDFRAYIKR-LNETKPVIVCGDLNVAHQEIDIKNAKTNR 178 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230 N+A FT E R+ L + GF D R + +YS+W Y + +N G RID+ ++S Sbjct: 179 NNAGFTDEEREKMTILLDNGFIDTFRTMYPEQVIYSWWSYRFRARERNTGWRIDYFLVSE 238 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + + ARI T+ G SDH PV + L++ Sbjct: 239 RLRNQIVDARIHTEIYG----SDHCPVELELNL 267 >gi|126698940|ref|YP_001087837.1| putative exodeoxyribonuclease [Clostridium difficile 630] gi|254974886|ref|ZP_05271358.1| putative exodeoxyribonuclease [Clostridium difficile QCD-66c26] gi|255092273|ref|ZP_05321751.1| putative exodeoxyribonuclease [Clostridium difficile CIP 107932] gi|255100359|ref|ZP_05329336.1| putative exodeoxyribonuclease [Clostridium difficile QCD-63q42] gi|255306301|ref|ZP_05350472.1| putative exodeoxyribonuclease [Clostridium difficile ATCC 43255] gi|255314013|ref|ZP_05355596.1| putative exodeoxyribonuclease [Clostridium difficile QCD-76w55] gi|255516693|ref|ZP_05384369.1| putative exodeoxyribonuclease [Clostridium difficile QCD-97b34] gi|255649791|ref|ZP_05396693.1| putative exodeoxyribonuclease [Clostridium difficile QCD-37x79] gi|306519893|ref|ZP_07406240.1| putative exodeoxyribonuclease [Clostridium difficile QCD-32g58] gi|115250377|emb|CAJ68199.1| Exodeoxyribonuclease [Clostridium difficile] Length = 250 Score = 191 bits (486), Expect = 6e-47, Method: Composition-based stats. Identities = 73/261 (27%), Positives = 118/261 (45%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN IRA + + KE + DI CLQETK ++ + L + + Sbjct: 1 MKFISWNVNGIRACVGKGFLDFFKEVDADIFCLQETKLQEGQIELD-LPGYFQYWNYAER 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +P++++ + ++ D + R I F +Y P+ Sbjct: 60 KGYSGTAIFTKKEPLKVMYGINIEEHDKEGRVITLEFE----DFYFVTVYTPNSQSELKR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + + +L+ +P+I GD N+ + D NP +A FT E R+ Sbjct: 116 L--EYRTRWEDDFIDYLTKLDNHKPVIVCGDMNVAHKEIDLKNPKNNMKNAGFTKEEREK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F KL + GF D R + +YS+W Y ++ N G RID+ S + L SA I Sbjct: 174 FSKLLDSGFIDTYRYFNPDKEGVYSWWSYRFNARKNNAGWRIDYFCASKKLEDRLVSADI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 T+ G SDH PV + + Sbjct: 234 HTEILG----SDHCPVELEIK 250 >gi|166030570|ref|ZP_02233399.1| hypothetical protein DORFOR_00233 [Dorea formicigenerans ATCC 27755] gi|166029572|gb|EDR48329.1| hypothetical protein DORFOR_00233 [Dorea formicigenerans ATCC 27755] Length = 250 Score = 191 bits (486), Expect = 7e-47, Method: Composition-based stats. Identities = 74/261 (28%), Positives = 112/261 (42%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN IRA + +E + DI C+QETK ++ +T + + + Sbjct: 1 MKFISWNVNGIRACAGKGFMDFFQETDADIFCIQETKMQEGQLELDT-PGYHQYWNYAKK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +PI + L ++ D + R I F + Sbjct: 60 KGYSGTAIFTKQEPISVSYGLGIEEHDQEGRVITLEFEDFYFITVYTPNSQSELARLDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + ++LE +P+IF GD N+ D NP +A FT E RQ Sbjct: 120 M------KWEEDFLTYLKKLEETKPVIFCGDLNVAHTEIDLKNPKTNRKNAGFTDEERQK 173 Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L N GF D R + +YS+W Y + +KN G RID+ +S L A+I Sbjct: 174 FTELLNAGFVDTFRYFYPEQTGIYSWWSYRFSARAKNAGWRIDYFCVSESLKDRLEDAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 T G SDH PV + + Sbjct: 234 LTDIMG----SDHCPVELDIK 250 >gi|253580808|ref|ZP_04858071.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251847878|gb|EES75845.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 251 Score = 191 bits (486), Expect = 7e-47, Method: Composition-based stats. Identities = 71/262 (27%), Positives = 113/262 (43%), Gaps = 13/262 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN IRA I + DI CLQETK + E L + + Sbjct: 1 MKLISWNVNGIRACIGKGFEESFAALDADIFCLQETKCQQGQVKLE-LPGYYQYWNYANR 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 + Y+G A+ +K +P+ +V + + D + R I + + +Y P+ Sbjct: 60 RGYSGTAVFTKKEPLSVVYGIGIEKHDKEGRVITLEYE----KFYLVTVYTPNSQSELRR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + +L+ +P+I GD+N+ Q D NP +A FT E R Sbjct: 116 L--EYRMHWEEDFLAYLLKLQESKPVICCGDFNVAHQEIDLKNPKTNRKNAGFTDEERAC 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F K+ GF D R + YS+W Y + KN G RID+ + SP+ L A I Sbjct: 174 FGKVLESGFIDTFRYFYPDVEGRYSWWSYRFKAREKNAGWRIDYFITSPQLKDKLKGAEI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 ++ G SDH PV + + + Sbjct: 234 HSEIMG----SDHCPVELQITL 251 >gi|325660677|ref|ZP_08149307.1| exodeoxyribonuclease [Lachnospiraceae bacterium 4_1_37FAA] gi|325473038|gb|EGC76246.1| exodeoxyribonuclease [Lachnospiraceae bacterium 4_1_37FAA] Length = 250 Score = 191 bits (486), Expect = 7e-47, Method: Composition-based stats. Identities = 71/261 (27%), Positives = 114/261 (43%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN IRA + + KE + DI C+QE+K ++ E L+ + + Sbjct: 1 MKFISWNVNGIRACVQKGFLDFFKEADADIFCIQESKMQEGQLKLE-LEGYHQFWNYAER 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +P+ + + ++ D + R I F + Sbjct: 60 KGYSGTAIFTKQEPLSVAYGIGMEEHDKEGRVITLEFEEFYFVTVYTPNSQNELARLDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + ++LE ++P+IF GD N+ + D NP +A FT E R Sbjct: 120 MQWETEFLKY------LKKLEAKKPVIFCGDLNVAHREIDLKNPKTNRKNAGFTDEERGK 173 Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L + GF D R + +YS+W Y + +KN G RID+ +S L A+I Sbjct: 174 FTELLSAGFIDTFRYFYPEQEGIYSWWSYRFSARAKNAGWRIDYFCVSECLKDRLRDAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 T G SDH PV + + Sbjct: 234 LTDVMG----SDHCPVELDFE 250 >gi|182416804|ref|ZP_02948195.1| exodeoxyribonuclease III [Clostridium butyricum 5521] gi|237669009|ref|ZP_04528993.1| exodeoxyribonuclease III [Clostridium butyricum E4 str. BoNT E BL5262] gi|182379266|gb|EDT76765.1| exodeoxyribonuclease III [Clostridium butyricum 5521] gi|237657357|gb|EEP54913.1| exodeoxyribonuclease III [Clostridium butyricum E4 str. BoNT E BL5262] Length = 254 Score = 191 bits (486), Expect = 7e-47, Method: Composition-based stats. Identities = 71/265 (26%), Positives = 121/265 (45%), Gaps = 13/265 (4%) Query: 1 MSVVTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 M++ + +WNVN +RA + + E + DI C+QETK ++ E L+ + Sbjct: 1 MTLKKLISWNVNGLRACVKKGFLDYFNEMDADIFCVQETKLQEGQIDLE-LEGYYDYWNY 59 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G A+ +K +PI + L ++ D + R I + + + + N Sbjct: 60 AEKKGYSGTAVFTKEKPISVKMGLGIEEHDNEGRVITLEYD------KFFLVNVYTPNSQ 113 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + + R + LE +P+I GD N+ + D NP +A F+ E Sbjct: 114 QKLARLEYRMSWEDVFRNYLKDLEKNKPVILCGDLNVAHKEIDLKNPSSNRKNAGFSDEE 173 Query: 180 RQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R +L N GFTD R + +YS+W Y ++ + N G RID+ ++S L Sbjct: 174 RSKMSELLNSGFTDTFRYFYPDIEGVYSWWSYRFNARANNAGWRIDYFIVSQSLNDKLED 233 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263 A+I T G SDH PV + +++ Sbjct: 234 AKIHTSIEG----SDHCPVELEINL 254 >gi|260682949|ref|YP_003214234.1| putative exodeoxyribonuclease [Clostridium difficile CD196] gi|260686547|ref|YP_003217680.1| putative exodeoxyribonuclease [Clostridium difficile R20291] gi|260209112|emb|CBA62286.1| putative exodeoxyribonuclease [Clostridium difficile CD196] gi|260212563|emb|CBE03542.1| putative exodeoxyribonuclease [Clostridium difficile R20291] Length = 255 Score = 191 bits (486), Expect = 7e-47, Method: Composition-based stats. Identities = 73/261 (27%), Positives = 118/261 (45%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN IRA + + KE + DI CLQETK ++ + L + + Sbjct: 6 MKFISWNVNGIRACVGKGFLDFFKEVDADIFCLQETKLQEGQIELD-LPGYFQYWNYAER 64 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +P++++ + ++ D + R I F +Y P+ Sbjct: 65 KGYSGTAIFTKKEPLKVMYGINIEEHDKEGRVITLEFE----DFYFVTVYTPNSQSELKR 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + + +L+ +P+I GD N+ + D NP +A FT E R+ Sbjct: 121 L--EYRTRWEDDFIDYLTKLDNHKPVIVCGDMNVAHKEIDLKNPKNNMKNAGFTKEEREK 178 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F KL + GF D R + +YS+W Y ++ N G RID+ S + L SA I Sbjct: 179 FSKLLDSGFIDTYRYFNPDKEGVYSWWSYRFNARKNNAGWRIDYFCASKKLEDRLVSADI 238 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 T+ G SDH PV + + Sbjct: 239 HTEILG----SDHCPVELEIK 255 >gi|21229250|ref|NP_635172.1| exodeoxyribonuclease III [Methanosarcina mazei Go1] gi|20907825|gb|AAM32844.1| Exodeoxyribonuclease III [Methanosarcina mazei Go1] Length = 258 Score = 191 bits (486), Expect = 7e-47, Method: Composition-based stats. Identities = 69/260 (26%), Positives = 116/260 (44%), Gaps = 12/260 (4%) Query: 6 VATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETCGQ 62 + +WNVN +RA + + E+ DI+C+QETK P E Y+ + Q Sbjct: 7 LISWNVNGLRAAVKKGFLDLLLEHRFDIVCVQETKVSQDKLPREVKNIQGYYNYFVSAEQ 66 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 Y+GV SK +PI++ + + D + RF+ + + N+Y P+G + Sbjct: 67 NGYSGVGTFSKNKPIKLEKGMGIEVFDREGRFLRTDYE----DFVLLNIYFPNGK-ASQE 121 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + K+++ FL +A+ + L+ GD N + D P E + F E R Sbjct: 122 RLGYKMAFYDAFLDYANALKSEGKKLVICGDVNTAHKEIDLARPKQNEMISGFLPEERAW 181 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 K G+ D+ R + YS+W + S+N G R+D++ +S + SA I Sbjct: 182 MDKFLAAGYLDSFRMFNPEGGNYSWWSMRTGARSRNVGWRLDYVFVSENLRENVKSASIY 241 Query: 243 TKPRGWTKPSDHTPVIVSLD 262 + G SDH PV + L+ Sbjct: 242 PEIMG----SDHCPVGLELE 257 >gi|114778638|ref|ZP_01453454.1| exodeoxyribonuclease III xth [Mariprofundus ferrooxydans PV-1] gi|114551103|gb|EAU53664.1| exodeoxyribonuclease III xth [Mariprofundus ferrooxydans PV-1] Length = 252 Score = 191 bits (486), Expect = 8e-47, Method: Composition-based stats. Identities = 81/259 (31%), Positives = 138/259 (53%), Gaps = 7/259 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + TWNVNS+ R+ ++ A++++ PD++ LQETKT D FP L++ Y + GQK Sbjct: 1 MKITTWNVNSLNVRLPHVLAYLRDEQPDVLALQETKTPDAGFPVAELEAAGYKVIFSGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVA+L++ ++V LPG D + + + I P+G I S K Sbjct: 61 TYNGVAMLARSSMQQVVNDLPGLDDPQRRLLAATIDGMRVVNVYI-----PNGQEIGSDK 115 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W++ F + L+ + L+ GD+NI P D ++P W+ + R+ F Sbjct: 116 YAYKMRWLQALCDFLQEELKQHDRLVLLGDFNIAPADIDVHDPTRWQGKILCSEPEREFF 175 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 L +G D +R+ H ++S+WDY ++ + G+RIDH++++ L +A + Sbjct: 176 STLLQLGLIDGVRSLHPEKEMFSWWDYRMSAYRRGWGVRIDHLLVTHALA--LSAAGVAV 233 Query: 244 KPRGWTKPSDHTPVIVSLD 262 K R +PSDH PV + + Sbjct: 234 KYRELDRPSDHAPVWIEFE 252 >gi|317056539|ref|YP_004105006.1| exodeoxyribonuclease III Xth [Ruminococcus albus 7] gi|315448808|gb|ADU22372.1| exodeoxyribonuclease III Xth [Ruminococcus albus 7] Length = 250 Score = 191 bits (486), Expect = 8e-47, Method: Composition-based stats. Identities = 61/264 (23%), Positives = 108/264 (40%), Gaps = 18/264 (6%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60 + +WNVN RA + + + DI C+QETK + Y + + Sbjct: 1 MKFISWNVNGFRACLQKGFGDFFTAADADIFCIQETKMQPDQ---ADFSPEGYLKYFHSA 57 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+G A+ +K +P+E+ L G D + N Sbjct: 58 VKKGYSGTAVYTKKEPLEVKFGLNGTHTDEGRVITCEFEDYYFVCCYVPNAQNELKRIDY 117 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 +++ +R +L+ +P+++ GD N+ + D NP +A F+ E R Sbjct: 118 RMEFE-------DDMRAYLSQLDKTKPVVYCGDLNVAHEEIDLKNPKSNAGNAGFSDEER 170 Query: 181 QSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 F +L GF D R + YS+W Y ++ N G RID+ ++S + + Sbjct: 171 GKFTELLGAGFADTFRRLYPDKAGAYSWWSYRFNARKNNAGWRIDYFVVSERLMDKVKDS 230 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 +I + G SDH PV + +++ Sbjct: 231 KILSDITG----SDHCPVELDIEL 250 >gi|57239110|ref|YP_180246.1| exodeoxyribonuclease III [Ehrlichia ruminantium str. Welgevonden] gi|58579057|ref|YP_197269.1| exodeoxyribonuclease III [Ehrlichia ruminantium str. Welgevonden] gi|57161189|emb|CAH58103.1| putative exodeoxyribonuclease [Ehrlichia ruminantium str. Welgevonden] gi|58417683|emb|CAI26887.1| Exodeoxyribonuclease III [Ehrlichia ruminantium str. Welgevonden] Length = 278 Score = 191 bits (486), Expect = 8e-47, Method: Composition-based stats. Identities = 92/278 (33%), Positives = 145/278 (52%), Gaps = 17/278 (6%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 ++ +ATWNVNSIR RI +L W+ + N DI LQE K + FP ++SL Y+ GQ Sbjct: 1 MLRIATWNVNSIRKRIDHLCTWLTDYNIDIALLQEIKCTNDQFPALEIKSLGYNYYVHGQ 60 Query: 63 KSYNGVAILSKYQPI-----------------EIVTHLPGDDLDVQARFIEATFTINTQT 105 K+ NGVAI++KY + + ++R++E N Sbjct: 61 KARNGVAIITKYPIVEEVVTNIFSLYGTSNVCCELGSEDFTYNCEESRYLECVILYNGIK 120 Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165 +R+G++Y+P+G + S + K+ + + + S L+ EE I GDYN+ P P D Y+ Sbjct: 121 IRVGSIYVPNGQSVESDAFQYKLGFFDQLKEYMSFLLKKEEICILGGDYNVAPYPIDMYS 180 Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225 I C R+ F+ + N GF DA R ++ +++W+Y SW +NKG+RID Sbjct: 181 YEIMNGKLCCHQFEREKFRSIINTGFFDAFRLLNNDKKQFTWWNYKFGSWQENKGLRIDM 240 Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 ++LSP+A + S + RG PSDH PV+ L++ Sbjct: 241 LLLSPQAMDKVSSCVVHDGLRGLNVPSDHVPVVCDLNL 278 >gi|256372492|ref|YP_003110316.1| exodeoxyribonuclease III Xth [Acidimicrobium ferrooxidans DSM 10331] gi|256009076|gb|ACU54643.1| exodeoxyribonuclease III Xth [Acidimicrobium ferrooxidans DSM 10331] Length = 258 Score = 191 bits (486), Expect = 8e-47, Method: Composition-based stats. Identities = 77/259 (29%), Positives = 130/259 (50%), Gaps = 3/259 (1%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +ATWNVNSIRARI + AW + PD++ LQETK FP ++L SL YH+ G Sbjct: 2 TMRLATWNVNSIRARIELVVAWAERVAPDVLLLQETKVATDQFPADSLVSLGYHVTHWGT 61 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 ++NGVA+L++ P E+ + A ++Y+P+G + Sbjct: 62 GAWNGVAVLTREAPREVRYGTGFARAPLATEEPRALAVRLEAGW-FMSVYVPNGRALDDP 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 Y K++W+ + + ++ GD+N+ P HD ++P E +L R++ Sbjct: 121 HYVYKLTWLAELRAHLADLVADG--VVVGGDFNVAPSDHDVWDPSALEGATHVSLPERRA 178 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 L +G TD RA H +++WDY ++ + G+RID ++ S + + + +D Sbjct: 179 LDALLGLGLTDVYRALHPDDPGFTWWDYRQGAFRRGMGMRIDLVLASEDIARNVVAVDVD 238 Query: 243 TKPRGWTKPSDHTPVIVSL 261 + R +PSDH P++V L Sbjct: 239 IEARRAPRPSDHAPLVVDL 257 >gi|325261710|ref|ZP_08128448.1| exodeoxyribonuclease III [Clostridium sp. D5] gi|324033164|gb|EGB94441.1| exodeoxyribonuclease III [Clostridium sp. D5] Length = 250 Score = 191 bits (485), Expect = 9e-47, Method: Composition-based stats. Identities = 69/261 (26%), Positives = 114/261 (43%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN IRA + + + + DI C+QETK ++ E L+ + + + Sbjct: 1 MKFISWNVNGIRACVQKGFLEFFSQADADIFCIQETKMQEGQLSLE-LEGYHQYWNYAVK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G A+ SK +P+ +V + ++ D + R I + + Sbjct: 60 KGYSGTAVFSKIEPLSVVYGIGIEEHDQEGRVITLEYEDFYFVTVYTPNAQNELARLDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + R ++LE +P++ GD N+ + D NP A F+ E RQ Sbjct: 120 M------KWEDDFRAWLKKLEENKPVVVTGDMNVAHKEIDLKNPKTNRKSAGFSDEERQK 173 Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L + GF D R + +YS+W Y + KN G RID+ +S L A I Sbjct: 174 FTELLDAGFIDTFRYFYPDQEGIYSWWSYRFRAREKNAGWRIDYFCVSECLKDRLVDAGI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 T G SDH PV++ ++ Sbjct: 234 LTDIMG----SDHCPVVLEMN 250 >gi|296126298|ref|YP_003633550.1| exodeoxyribonuclease III Xth [Brachyspira murdochii DSM 12563] gi|296018114|gb|ADG71351.1| exodeoxyribonuclease III Xth [Brachyspira murdochii DSM 12563] Length = 257 Score = 191 bits (485), Expect = 9e-47, Method: Composition-based stats. Identities = 75/265 (28%), Positives = 112/265 (42%), Gaps = 15/265 (5%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN IRA L +IK+ NPDIICLQETK ++ P + Y + Sbjct: 1 MKIISWNVNGIRAAYKKGLVDFIKKENPDIICLQETKAFEEQLPEDLRNIEGYELFINPA 60 Query: 63 KS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 Y+GVAI +K +P +++ + G ++ I N+Y P+G Sbjct: 61 DPEVKKGYSGVAIYTKLKPNKVIKNKLGSKFSDNEG---RILSLEFDDFTIFNVYFPNGG 117 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + + +L+ + +I GD NI + D P E F Sbjct: 118 KSEEHF--NYKLSFYDAITKHLTKLKSKTNVILCGDMNIAHEAIDLARPKENEKSIGFLP 175 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 E R+ + N GFTD R YS+WD S KN G RID+ ++ E + Sbjct: 176 EEREKITEFLNKGFTDTFRMFVKEGGHYSWWDMKTRSREKNVGWRIDYFFVNNEIAQNIK 235 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLD 262 A I T G SDH P+++ D Sbjct: 236 RADIMTDVMG----SDHCPILIEWD 256 >gi|260061515|ref|YP_003194595.1| exodeoxyribonuclease [Robiginitalea biformata HTCC2501] gi|88785647|gb|EAR16816.1| exodeoxyribonuclease [Robiginitalea biformata HTCC2501] Length = 269 Score = 191 bits (485), Expect = 9e-47, Method: Composition-based stats. Identities = 81/262 (30%), Positives = 127/262 (48%), Gaps = 14/262 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY---HIET 59 + +A++NVN IRA I W+ PD+ICLQETK + E + Y + + Sbjct: 14 LKIASYNVNGIRAAIRKGFLDWLVLAGPDVICLQETKAMKEQLDLEAFEKAGYPYHYWFS 73 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GVAILS+ +P + +D + R I A F + I +LYLP G I Sbjct: 74 AEKKGYSGVAILSRQRPDHVAYGTGIGYMDAEGRNIRADFGG----VSIMSLYLPSGTNI 129 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 D K+ ++ F + L+ GDYNI +P D ++P+ +N + F Sbjct: 130 AR--LDHKLQYMADFQAYVDSLKREIPELVICGDYNICHRPIDIHDPVRNKNVSGFLPVE 187 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R+ + GF D+ R + H Y++W Y A + +KNKG R+D+ M+S L + Sbjct: 188 REWIGNFIDSGFIDSFRHFNPDPHHYTWWTYRAGARAKNKGWRLDYGMVSRPLEDRLARS 247 Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261 I + R SDH P+++ L Sbjct: 248 VILPEAR----HSDHCPIMLEL 265 >gi|148271654|ref|YP_001221215.1| putative exonuclease III [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147829584|emb|CAN00499.1| putative exonuclease III [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 278 Score = 191 bits (485), Expect = 9e-47, Method: Composition-based stats. Identities = 76/277 (27%), Positives = 124/277 (44%), Gaps = 10/277 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + VATWNVNSIR R+ + W+ + D++ +QE K + + FP + + Y + G Sbjct: 1 MRVATWNVNSIRTRVGRVVDWLVREDVDVLAMQEIKCKPEQFPMQAFEEAGYEVAVHGLS 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLD------VQARFIEATFTINTQTLRIGNLYLPHGN 117 +NGVAI S+ ++VT G Q +R+ +LY+P+G Sbjct: 61 QWNGVAIASRLPLEDVVTTFEGMPRFGKPDASGQPPLEARAMGATVAGVRLWSLYVPNGR 120 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACF 175 + Y K+ W+ L + GD+N+ P D ++P ++E Sbjct: 121 ALDDPHYSYKLEWLGALAADTRAWLASDPETPLALMGDWNVAPLDTDVWDPALFEGKTHT 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 + R +F + G TD +R + Y++WDY + +N+G+RID I+ + L Sbjct: 181 SEPERAAFAAFLDAGLTDVVRPSIP--EGYTYWDYQQLRFPRNEGMRIDFILGNDRFQEL 238 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQD 272 + S RI R PSDH PV V LD+ + Sbjct: 239 VGSPRIHRDERKGDGPSDHVPVAVDLDVETELDDDRP 275 >gi|307545625|ref|YP_003898104.1| exonuclease III [Halomonas elongata DSM 2581] gi|307217649|emb|CBV42919.1| exonuclease III [Halomonas elongata DSM 2581] Length = 277 Score = 191 bits (485), Expect = 9e-47, Method: Composition-based stats. Identities = 73/275 (26%), Positives = 126/275 (45%), Gaps = 15/275 (5%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N IRAR+H L A ++ + P +I LQETK +D FP E +++L Y + GQK Sbjct: 1 MRLVSFNINGIRARLHQLEALVERHRPAVIGLQETKVQDSEFPAEAVEALGYRVYYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVT-----HLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + GVA++ + +D + + + L + N Y P G Sbjct: 61 GHYGVALMCCREQCPEPELVQRGFPDDEDDAQRRLIGVRLRGADGEPLTVWNGYFPQGEN 120 Query: 119 ITST-KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWEN 171 I K+ K + + ++ +E L GD+NI P D + E Sbjct: 121 IEHPVKFPHKRRFYAQLSSLLKEQHRPDERLAIMGDFNISPADIDIGIGESNRKRWLREG 180 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKN--KGIRIDHIML 228 F E R+ ++ G +D+ R + +S++DY + + ++ +G+RID+I+ Sbjct: 181 KTSFQPEEREWLDAIKAWGLSDSYRDRYPEVDDRFSWFDYRSKGFDRDPKRGLRIDYILT 240 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + + + A ID RG KPSDH PV D+ Sbjct: 241 TAPLATHIADAGIDYDLRGMEKPSDHAPVWTEFDL 275 >gi|299821801|ref|ZP_07053689.1| exodeoxyribonuclease III [Listeria grayi DSM 20601] gi|299817466|gb|EFI84702.1| exodeoxyribonuclease III [Listeria grayi DSM 20601] Length = 254 Score = 191 bits (485), Expect = 9e-47, Method: Composition-based stats. Identities = 69/264 (26%), Positives = 117/264 (44%), Gaps = 12/264 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + + + KE + DI C+QETK + E L+ + + + Sbjct: 1 MRFISWNVNGLRAAVKKGFSDYFKEADADIFCVQETKLQAGQIELEGLEGYHDYWNYAVK 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G A+ +K +P+ + LP D + + R I F + Sbjct: 61 KGYSGTAVFTKEEPLSVQYGLPEDVHNQEGRVITLEFPAFYFVTVYTPNSQAELKRLDYR 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 ++ L+ ++P++F GD N+ Q D NP + F+ + R Sbjct: 121 T------EWEQAFADHIIALDKQKPVVFCGDLNVAHQEIDLKNPKTNRKNPGFSDQERAM 174 Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L + GF D R + YS+W Y ++ S+N G RID+ ++S + + ARI Sbjct: 175 FGQLLDNGFVDTFRYLYPEQEDAYSWWSYRMNARSRNVGWRIDYFVVSSRLSDSIQEARI 234 Query: 242 DTKPRGWTKPSDHTPVIVSLDIPE 265 + G SDH PV + + I E Sbjct: 235 HAEVLG----SDHCPVELEIAIEE 254 >gi|150388422|ref|YP_001318471.1| exodeoxyribonuclease III Xth [Alkaliphilus metalliredigens QYMF] gi|149948284|gb|ABR46812.1| exodeoxyribonuclease III Xth [Alkaliphilus metalliredigens QYMF] Length = 251 Score = 191 bits (485), Expect = 9e-47, Method: Composition-based stats. Identities = 70/262 (26%), Positives = 120/262 (45%), Gaps = 13/262 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN IRA + + E + DI C+QE+K ++ + L+ + + Sbjct: 1 MKLVSWNVNGIRACVKKGFLDYFNEVDADIFCIQESKLQEGQIELD-LEGYEQYWNYAVK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G A+ +K +PI + + ++ + + R + F + N+Y P+ Sbjct: 60 KGYSGTAVFTKEKPISVKYGVGEEEDEEEGRVLTLEFD----QFYLVNVYTPNSKRGLER 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 D + R + L+ +P+I GD N+ + D NP + A FT E R+ Sbjct: 116 L--DGRMIWEDEFRAHLKELDAIKPVILCGDLNVAHEEIDLKNPKSNKKSAGFTNEEREK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +L GF D+ R + YS+W Y + +N G RID+ ++S + L A I Sbjct: 174 MTELLTSGFIDSFRYFYPDLEGAYSWWSYMGKARERNAGWRIDYFVVSERLKNQLKEAAI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 + G SDH PV++ LDI Sbjct: 234 HPQIMG----SDHCPVVLELDI 251 >gi|113953146|ref|YP_731259.1| exodeoxyribonuclease III [Synechococcus sp. CC9311] gi|113880497|gb|ABI45455.1| exodeoxyribonuclease III [Synechococcus sp. CC9311] Length = 274 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 82/264 (31%), Positives = 132/264 (50%), Gaps = 4/264 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A+WNVNS+R R+ ++ W++ + D++ LQETK +D FP E Y I GQK Sbjct: 1 MQIASWNVNSVRTRLDHVLNWLEHSEADLLALQETKVDDPQFPLEPFLQRGYQIHIHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLP----GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +YNGVA++S+ ++ D + + + +R+ NLY+P+G+ + Sbjct: 61 AYNGVALISRTPLEDVRMGFSAELLDDAEAKELGAQKRVISALIDGVRVVNLYVPNGSSL 120 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 +S KY K+SW+ R+ +EPL GD+NI + D +P + Sbjct: 121 SSDKYSYKLSWLSCLERYLRAIQTRDEPLCVMGDFNIGLEARDLPDPDRLTGGIMASDRE 180 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R + + DA R +S+WDY + +W + +G RIDHI L ++ S Sbjct: 181 RNALKAALGPDLQDAFRLFEPNSGHWSWWDYRSGAWDRGRGWRIDHIYLDETLRAVARSC 240 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 ID + RG +PSDH PV+V L Sbjct: 241 SIDKQERGRIQPSDHAPVVVDLAW 264 >gi|285016920|ref|YP_003374631.1| exodeoxyribonuclease III protein [Xanthomonas albilineans GPE PC73] gi|283472138|emb|CBA14645.1| probable exodeoxyribonuclease III protein [Xanthomonas albilineans] Length = 259 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 83/260 (31%), Positives = 135/260 (51%), Gaps = 6/260 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A+WNVNS+ R+ +L W+ PD++ +QETK ED FP L Y GQK Sbjct: 1 MKIASWNVNSLNVRLPHLQQWLDTFAPDVVGIQETKLEDHKFPDAALAEAGYRSVFAGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAILS+ ++ +PG + + + LRI NLY+ +G + S K Sbjct: 61 TYNGVAILSRTPLSDVQIGVPGLEDEQKRAIAATVGD-----LRIVNLYVVNGQDVGSDK 115 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP-IIWENDACFTLEVRQS 182 Y K+ W++ + + L+ L+ GD+NI P D ++P + ++ + R + Sbjct: 116 YAYKLRWLEAVHAWLAVELQRYPRLVVLGDFNIAPDSRDVHDPLVWNDDHILTSTAERNA 175 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 +KL ++G D R H ++S+WDY + ++ G+RID ++S A ID Sbjct: 176 LRKLFDLGLHDGFRLHHADGGIFSWWDYRQAGFRRDLGLRIDLTLVSETLKEHTRGAGID 235 Query: 243 TKPRGWTKPSDHTPVIVSLD 262 PR W +PSDH P ++L+ Sbjct: 236 RTPRTWERPSDHAPAWIALE 255 >gi|11498188|ref|NP_069414.1| exodeoxyribonuclease III (xthA) [Archaeoglobus fulgidus DSM 4304] gi|2650040|gb|AAB90657.1| exodeoxyribonuclease III (xthA) [Archaeoglobus fulgidus DSM 4304] Length = 257 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 86/262 (32%), Positives = 140/262 (53%), Gaps = 6/262 (2%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 ++ +AT+NVNSIR+R+H + W+KEN PDI+C+QETK E++ FP + YH+ G Sbjct: 1 MLKIATFNVNSIRSRLHIVIPWLKENKPDILCMQETKVENRKFPEADFHRIGYHVVFSGS 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K NGVAI S +P ++ L + D + + N Y+P G I S Sbjct: 61 KGRNGVAIASLEEPEDVSFGLDSEPKDEDRLIRA-----KIAGIDVINTYVPQGFKIDSE 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 KY K+ W++R + + ++ ++ GD N+ P+P D ++P +N CF + R++ Sbjct: 116 KYQYKLQWLERLYHYLQKTVDFRSFAVWCGDMNVAPEPIDVHSPDKLKNHVCFHEDARRA 175 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYY-ADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 ++K+ +GF D +R H +Y+F+DY + + G R+D I+ +P Sbjct: 176 YKKILELGFVDVLRKIHPNERIYTFYDYRVKGAIERGLGWRVDAILATPPLAERCVDCYA 235 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 D KPR KPSDH P++ D+ Sbjct: 236 DIKPRLAEKPSDHLPLVAVFDV 257 >gi|148379451|ref|YP_001253992.1| exodeoxyribonuclease III [Clostridium botulinum A str. ATCC 3502] gi|153934303|ref|YP_001383830.1| exodeoxyribonuclease III [Clostridium botulinum A str. ATCC 19397] gi|153935156|ref|YP_001387380.1| exodeoxyribonuclease III [Clostridium botulinum A str. Hall] gi|148288935|emb|CAL83022.1| putative exodeoxyribonuclease [Clostridium botulinum A str. ATCC 3502] gi|152930347|gb|ABS35847.1| exodeoxyribonuclease III [Clostridium botulinum A str. ATCC 19397] gi|152931070|gb|ABS36569.1| exodeoxyribonuclease III [Clostridium botulinum A str. Hall] Length = 253 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 68/262 (25%), Positives = 115/262 (43%), Gaps = 12/262 (4%) Query: 4 VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + +WNVN +RA N WI E +PDI+C+QETK ++ Y+ Sbjct: 1 MRIYSWNVNGLRAVAKKNFIEWIGEESPDILCIQETKLQENQLEDNIKNIDGYYSYFSFA 60 Query: 62 -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GVA +K +PI + + + D + R + + + N+Y P+G Sbjct: 61 VKKGYSGVATYTKVKPISVKHSIGIEKFDSEGRILI----TGFKDFTLLNIYFPNGQ-RD 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K+ + + + + ++ + L+ GDYN D NP E + F R Sbjct: 116 EERLQYKLDFYEALFNYCDELVKEGKKLVICGDYNTAHNEIDLKNPKANEKTSGFLRIER 175 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 K+ G+TD R + YS+W Y + +N G RID+ +S + + Sbjct: 176 DWLDKIIERGYTDTFRNMNPDKIKYSWWSYRFKARERNAGWRIDYHFVSNNLLDRVENTE 235 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I + G SDH PV++ L Sbjct: 236 ILNEVYG----SDHCPVMLELK 253 >gi|163782364|ref|ZP_02177362.1| exodeoxyribonuclease III [Hydrogenivirga sp. 128-5-R1-1] gi|159882397|gb|EDP75903.1| exodeoxyribonuclease III [Hydrogenivirga sp. 128-5-R1-1] Length = 258 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 88/262 (33%), Positives = 140/262 (53%), Gaps = 6/262 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+NVNSI+AR L +W++ D++CLQE K E+KNFP+ + Y E QK Sbjct: 1 MKIATYNVNSIKARKELLFSWLEREPVDVLCLQELKQEEKNFPYGEFEERGYRCEVFAQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGV I SK ++ + D Q R I A +R+ N+Y PHG+ + K Sbjct: 61 TYNGVCICSKLPMEDVRKGFGDEYFDQQKRVISAKVG----EIRVINVYAPHGDLRGTEK 116 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ + R LR+ S EEP+ GD+N+ + D ++P + ++ E R++F Sbjct: 117 FYYKLEFYDRLLRYLSDNFSPEEPICMVGDFNVAREDIDVFDPELLKDTIGTMKEEREAF 176 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +++ GF DA R + +++WDY K+KG+RID+I+++ L +D Sbjct: 177 ERVLKWGFIDAFRYLYPDRVQFTWWDYIGGMIWKDKGMRIDYILITEPLLGKLKEVYVDL 236 Query: 244 KPRGW--TKPSDHTPVIVSLDI 263 PR KPSDH PVI ++ Sbjct: 237 WPRKRRTPKPSDHAPVIGVFEL 258 >gi|302039598|ref|YP_003799920.1| exodeoxyribonuclease III [Candidatus Nitrospira defluvii] gi|300607662|emb|CBK43995.1| Exodeoxyribonuclease III [Candidatus Nitrospira defluvii] Length = 257 Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats. Identities = 89/259 (34%), Positives = 133/259 (51%), Gaps = 5/259 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+NVNS+R R+ + W++ + PD++CLQETK +D FP L + Y I G K Sbjct: 1 MKIATFNVNSLRKRLPIVLQWLERHQPDVLCLQETKVQDSEFPLTALATSGYEITFRGMK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAILS+ +P I +AR + + Q + I N Y+P G I S K Sbjct: 61 AYNGVAILSRTKPEAISYGFDDGGEREEARLLR----VVIQGIPIINTYVPQGFEIDSPK 116 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W R + L +EP I+ GD N+ P+P D ++P C+ + R ++ Sbjct: 117 YQYKLGWYDRLRKHFETHLSPKEPAIWCGDMNVAPRPIDVHSPEKHLKHVCYHEDARNAY 176 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYAD-SWSKNKGIRIDHIMLSPEATSLLHSARID 242 K GF D + ++F+DY A + + NKG RIDHI+ +P +D Sbjct: 177 GKTVAWGFEDVFCRLYPDRQQFTFFDYRAPSALAANKGWRIDHILATPPLAQRCRRVDVD 236 Query: 243 TKPRGWTKPSDHTPVIVSL 261 +PR T PSDHT + Sbjct: 237 LEPRRATDPSDHTVLWAEF 255 >gi|88801994|ref|ZP_01117522.1| exodeoxyribonuclease III [Polaribacter irgensii 23-P] gi|88782652|gb|EAR13829.1| exodeoxyribonuclease III [Polaribacter irgensii 23-P] Length = 253 Score = 191 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 68/264 (25%), Positives = 125/264 (47%), Gaps = 15/264 (5%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY---HIET 59 + + ++NVN IRA + W++ NPD++C+QETK ++ Y + + Sbjct: 1 MKIISYNVNGIRAALKKGFLDWLQVANPDVLCIQETKAHKDQLDLSEFENAGYPYHYWFS 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y VA+L K +P + + +D + R + F + + ++YLP G + Sbjct: 61 AQKKGYASVAVLCKEKPNHVEYGTGIETMDFEGRNLRVDFDA----VSVMSMYLPSGTNL 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K++++ + + + L+ GDYNI + D +NP + + F E Sbjct: 117 DR--LNFKLNYMDEIQEYINNLKKEIPNLVVCGDYNICHEEMDIHNPK-MKGVSGFLPEE 173 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R GF D+ R + YS+W Y A++ + NKG R+D+ M+S + + A Sbjct: 174 RTWMSDFIKSGFVDSFRYLNQDVQAYSWWSYRANARANNKGWRLDYAMVSSALKAHISRA 233 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 I ++ K SDH P++V L++ Sbjct: 234 YILSEA----KHSDHCPIVVELNL 253 >gi|307266821|ref|ZP_07548344.1| exodeoxyribonuclease III Xth [Thermoanaerobacter wiegelii Rt8.B1] gi|306918162|gb|EFN48413.1| exodeoxyribonuclease III Xth [Thermoanaerobacter wiegelii Rt8.B1] Length = 257 Score = 191 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 70/263 (26%), Positives = 114/263 (43%), Gaps = 14/263 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + +WNVN +RA + + K+ N DI C+QETK + E L Y+ Sbjct: 1 MKLVSWNVNGLRACLQKGFMDYFKKVNADIFCIQETKLQPHQTDLEELNLEGYYAFWNFA 60 Query: 62 -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K+Y+G A+ +KY+P+ + + D + R I + + + N Sbjct: 61 EKKAYSGTAVFTKYKPLSVNYGIGIPQHDNEGRVITLEYE------KFYLVNTYTPNSQR 114 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + R +L+ +P+I GD N+ + D NP +A FT E R Sbjct: 115 GLTRLSYRMEWEEDFRNYLLKLDSVKPIILCGDLNVAHKEIDIKNPSANRRNAGFTDEER 174 Query: 181 QSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + L N GF D R + Y++W Y ++ KN G RID+ ++S L A Sbjct: 175 EKMTMLLNSGFIDTFRYFYPHKKDAYTWWSYMRNAREKNIGWRIDYFIVSQRLKDYLIDA 234 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 I + G SDH PV++ +D Sbjct: 235 EIHSDVMG----SDHCPVVLEID 253 >gi|168182409|ref|ZP_02617073.1| exodeoxyribonuclease III [Clostridium botulinum Bf] gi|182674470|gb|EDT86431.1| exodeoxyribonuclease III [Clostridium botulinum Bf] Length = 253 Score = 191 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 68/262 (25%), Positives = 115/262 (43%), Gaps = 12/262 (4%) Query: 4 VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + +WNVN +RA N WI E +PDI+C+QETK ++ Y+ Sbjct: 1 MRIYSWNVNGLRAVAKKNFIEWIGEESPDILCIQETKLQENQLEDNIKNIDGYYSYFSFA 60 Query: 62 -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GVA +K +PI + + + D + R + F + N+Y P+G Sbjct: 61 AKKGYSGVATYTKVKPISVKHSIGIEKFDSEGRILITEFK----DFTLLNIYFPNGQ-RD 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K+ + + + + ++ + L+ GDYN D NP E + F R Sbjct: 116 EERLQYKLDFYEALFNYCDELVKEGKKLVICGDYNTAHNEIDLKNPKANEKTSGFLRIER 175 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 K+ G+TD R + YS+W Y + +N G RID+ +S + + Sbjct: 176 DWLDKIIERGYTDTFRNMNPDKIKYSWWSYRFKARERNAGWRIDYHFVSNNLLDRVENTE 235 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I + G SDH P+++ L Sbjct: 236 ILNEVYG----SDHCPIMLELK 253 >gi|319787682|ref|YP_004147157.1| exodeoxyribonuclease III Xth [Pseudoxanthomonas suwonensis 11-1] gi|317466194|gb|ADV27926.1| exodeoxyribonuclease III Xth [Pseudoxanthomonas suwonensis 11-1] Length = 267 Score = 191 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 99/264 (37%), Positives = 152/264 (57%), Gaps = 5/264 (1%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 V+ +AT+NVN I R+ +L W++ PD++ LQE K D+ FP +++ Y G Sbjct: 7 RVLKLATFNVNGIGPRLPHLLLWLEREQPDVVALQELKARDEAFPAAEIEAAGYGAIWHG 66 Query: 62 QKSYNGVAIL-SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + +NGVA+L PIE LPGD D Q+R+IEA + +G LYLP+GNP Sbjct: 67 EHRWNGVALLGRGVTPIESRRGLPGDRSDSQSRYIEAAV----HGVVVGALYLPNGNPQP 122 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 K+D K+ W+ R R + ++L P + GD+N+IP D Y+P W+ DA EVR Sbjct: 123 GPKFDYKLKWMARLARHVATLVDLPHPAVLMGDFNVIPTDEDVYDPKSWKRDALIQPEVR 182 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 +++ KL G+TDA+R + +Y+FWDY+ + +++G+RIDH++L+P L A Sbjct: 183 EAYAKLLAQGWTDALREVYGEERVYTFWDYFRQHFERDRGLRIDHLLLNPALAPGLEEAG 242 Query: 241 IDTKPRGWTKPSDHTPVIVSLDIP 264 +D R KPSDH P + + +P Sbjct: 243 VDRWVRALEKPSDHAPTWIRVKLP 266 >gi|282865502|ref|ZP_06274553.1| exodeoxyribonuclease III Xth [Streptomyces sp. ACTE] gi|282559546|gb|EFB65097.1| exodeoxyribonuclease III Xth [Streptomyces sp. ACTE] Length = 271 Score = 191 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 58/271 (21%), Positives = 113/271 (41%), Gaps = 12/271 (4%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++TV + NVN +RA W+ ++ D++CLQE + E + P E + +H Sbjct: 1 MLTVTSVNVNGLRAAAKKGFVEWLAQSEADVVCLQEVRAEPQQLPEEVREPEGWHTVHAP 60 Query: 62 Q--KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIE--ATFTINTQTLRIGNLYLPHGN 117 K GV++ ++ P + G D+ F ++ + + +LYLP G+ Sbjct: 61 AAAKGRAGVSLYTRQAPERVQIGFGGFDVPGSEEFDTGGRYVEVDLPGVTVASLYLPSGD 120 Query: 118 PITSTKYDDKISWIKRFLRFASQRLEL----EEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + + + D+K ++ FL + ++ GD+NI + D N + ++ Sbjct: 121 -VGTERQDEKERFMAAFLPYLEGLKVRAAAAGREVLVCGDWNIAHREADLKNWKANKKNS 179 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRA--THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 F E R ++ + D YS+W Y ++ + G RID+ + + Sbjct: 180 GFLPEERAWLTRVFEEAAYVDVVRALHPDQEGPYSWWSYRGRAFDNDAGWRIDYQVATEG 239 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + A ++ + SDH PV V+ + Sbjct: 240 LAARAVKAWVERAATHGERWSDHAPVTVTYE 270 >gi|313897464|ref|ZP_07831007.1| exodeoxyribonuclease III [Clostridium sp. HGF2] gi|312957834|gb|EFR39459.1| exodeoxyribonuclease III [Clostridium sp. HGF2] Length = 254 Score = 191 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 69/261 (26%), Positives = 110/261 (42%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN IRA + + KE + D+ C+QETK + ET Y + + + Sbjct: 1 MRLVSWNVNGIRACMQKGFMDFFKEIDADVFCIQETKMQPGQLEIETPGYYQY-MNSAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G + SK +P+ + L ++ D + R I + + Sbjct: 60 KGYSGTMVFSKQKPLSVTYGLGIEEHDHEGRVITCEYEDFYLVCVYTPNSKDGLLRLDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + R +L + ++ GD N+ + D NP +A FT E R Sbjct: 120 M------VWEDAFRAYLHKLNETKSVLVCGDLNVAHKEIDLKNPKTNRRNAGFTDEERGK 173 Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 L GF D+ R + +YS+W Y + KN G RID+ ++S +A + ARI Sbjct: 174 MSVLLESGFIDSFRYLYPKQEGIYSWWSYRFKAREKNAGWRIDYFLVSEDAKEAIREARI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 T G SDH PV + D Sbjct: 234 HTDIYG----SDHCPVSLEFD 250 >gi|148284985|ref|YP_001249075.1| exodeoxyribonuclease III [Orientia tsutsugamushi str. Boryong] gi|146740424|emb|CAM80902.1| exodeoxyribonuclease III [Orientia tsutsugamushi str. Boryong] Length = 273 Score = 191 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 101/264 (38%), Positives = 148/264 (56%), Gaps = 2/264 (0%) Query: 1 MS-VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETL-QSLNYHIE 58 MS + + TWN+NSIRAR + L I + PDII LQE K E NFPF+ + +S Y+ Sbjct: 10 MSRKLKILTWNINSIRARAYQLNQLIYDIQPDIILLQEIKCESHNFPFQEINESHKYNFS 69 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 GQKSYNGVAILSK+ +I G+ QARFIEA +++ ++Y+P+G Sbjct: 70 INGQKSYNGVAILSKFPLEDIKFTFLGNPCPDQARFIEANCLTEVGYVKVISIYVPNGGE 129 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + S K+ K+ +I +F+++ L E +I GD+N+ P +D Y+ I +N CFTL Sbjct: 130 VNSDKFQIKLLFIDKFIKYLHSSKNLGESIILGGDFNVAPYDNDVYSAIELQNTTCFTLP 189 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 +Q +KL N F D R H +++WDY A ++ +N G+RID+I+ + Sbjct: 190 EKQYIRKLINHNFIDIYRLFHQRQKKFTWWDYRAGAFERNLGMRIDYILCTISIALKATD 249 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 ID R + SDH PVI S + Sbjct: 250 CYIDYHTRNNHRASDHAPVIASFE 273 >gi|157826086|ref|YP_001493806.1| exodeoxyribonuclease III [Rickettsia akari str. Hartford] gi|157800044|gb|ABV75298.1| Exodeoxyribonuclease III [Rickettsia akari str. Hartford] Length = 260 Score = 191 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 97/260 (37%), Positives = 146/260 (56%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+NSI+ R++ L ++ + NPDI+ LQE K + +NFPF+ L L Y+ GQ+ Sbjct: 1 MKIATWNINSIKTRLNLLRNFLSQENPDILLLQEIKCKTENFPFDELSDLPYNFYVHGQQ 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 SYNGVAI+SK+ EI+ P + QARF+E ++ I +LY P+G+ + S K Sbjct: 61 SYNGVAIISKFPADEIIKDFPNNYCSDQARFLEIKLSLPIGFCNIISLYAPNGSFVGSDK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+++ F+ + S + +E I GD NI P D Y+P I CFT ++ Sbjct: 121 FVAKLAFYDNFINYLSTKKSFDEKTIIGGDLNIAPFDIDVYSPKILSETTCFTEVEQKKL 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + + N GF D R H + +S+WDY A + +NKG+RID I+ L + +D Sbjct: 181 RTILNAGFEDLYRLMHPSKQAFSWWDYRAGCFEQNKGMRIDMILGCNNTIDYLENCYMDY 240 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 R KPSDH PVI S + Sbjct: 241 NLRTQEKPSDHIPVIASFKV 260 >gi|227496831|ref|ZP_03927099.1| exonuclease III [Actinomyces urogenitalis DSM 15434] gi|226833664|gb|EEH66047.1| exonuclease III [Actinomyces urogenitalis DSM 15434] Length = 283 Score = 191 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 74/286 (25%), Positives = 126/286 (44%), Gaps = 30/286 (10%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSIR R+ + A++ N D++ +QE K + + FP E ++ Y + G Sbjct: 1 MRLATWNVNSIRTRVDRVMAFLDRENIDVLAMQEIKCKPEQFPREPFEAAGYELAVHGLN 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDV-------------------------QARFIEAT 98 +NGVAI S+ ++ T PG Sbjct: 61 QWNGVAIASRVGLTDVETSFPGQPTWESASLGGAVVEARALGVTVGGQPAGSTPPPAPDA 120 Query: 99 FTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRL--ELEEPLIFAGDYNI 156 +R+ +LY+P+G +T Y K+ W++ + L + PL GD+N+ Sbjct: 121 AAPACAPVRLWSLYVPNGRELTHPHYTYKLDWLRTLREDVAAWLSEDPGLPLALVGDWNV 180 Query: 157 IPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS 216 P+ D ++ + +E + R +F + +G + R+ Y++WDY + Sbjct: 181 APRDEDVWDMVAFEGATHVSSPERAAFVAFEQVGMEEVTRS---RVTNYTYWDYQKLRFP 237 Query: 217 KNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 +N+G+RID + S + + A ID R SDH PVIV +D Sbjct: 238 RNEGMRIDFVYASAALAARVRDAAIDRDERKGKGASDHVPVIVEID 283 >gi|260904213|ref|ZP_05912535.1| exodeoxyribonuclease III [Brevibacterium linens BL2] Length = 256 Score = 191 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 73/255 (28%), Positives = 119/255 (46%), Gaps = 3/255 (1%) Query: 12 NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAIL 71 NSIRAR + AW+ ++ D++ +QE K +D+ FP + S Y + G +NGVAI Sbjct: 2 NSIRARHDRIGAWLDRSDVDVLAIQELKCKDEQFPEDLFTSRGYEVSFHGLNQWNGVAIA 61 Query: 72 SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT-LRIGNLYLPHGNPITSTKYDDKISW 130 S+ + + +EA T +R+ +LY+P+G + Y K+ W Sbjct: 62 SRVGLEDPEIGFTDIPSFGEEPVVEARALSATCGGVRVYSLYVPNGRELDHPHYTYKLEW 121 Query: 131 IKRFLRFASQRL--ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN 188 + S +L ++ L+ GD+N+ P D ++ ++ + R +F L Sbjct: 122 YRALTADISAQLSETPDKKLVLCGDFNVAPLDEDVWDMAEFDGLTHVSEPERDAFNSLLG 181 Query: 189 MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGW 248 G T+ R +Y+FWDY ++ K KG+RID + SP A ID + R Sbjct: 182 AGLTEVTRQFTPGPGVYTFWDYQRLAFPKKKGMRIDFELASPSLAEKATGAEIDREERKG 241 Query: 249 TKPSDHTPVIVSLDI 263 SDH PVIV ++ Sbjct: 242 KGASDHAPVIVDYEV 256 >gi|329946194|ref|ZP_08293807.1| putative exodeoxyribonuclease III [Actinomyces sp. oral taxon 170 str. F0386] gi|328527792|gb|EGF54783.1| putative exodeoxyribonuclease III [Actinomyces sp. oral taxon 170 str. F0386] Length = 269 Score = 191 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 74/272 (27%), Positives = 123/272 (45%), Gaps = 16/272 (5%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSIR R+ + A+++ + D + +QE K FP E ++ Y + G Sbjct: 1 MRLATWNVNSIRTRVDRVLAFLEREDVDALAMQEIKCRPDQFPVEPFEAAGYRLAIHGLN 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-----------TQTLRIGNLY 112 +NGVAI S+ ++ T PG E + +R+ +LY Sbjct: 61 QWNGVAIASRVGLDDVATSFPGQPGWAAKSEAEPVVEARALGATVGAASEARPVRLWSLY 120 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWE 170 +P+G +T Y K+ W++ + L E L GD+N+ P+ D ++ ++E Sbjct: 121 VPNGRELTHPHYTYKLDWLRALRDDVATWLRAEPDLPLALVGDWNVAPKDEDVWDMSVFE 180 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230 + R++F G + R + Y++WDY + +N+G+RID + S Sbjct: 181 GATHVSAPEREAFAAFAETGMHEVTR---ERVTNYTYWDYQKLRFPRNEGMRIDFVYASQ 237 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + A ID R SDH PVIV +D Sbjct: 238 ALADRVTGAAIDRNERKGKGASDHVPVIVEVD 269 >gi|152996388|ref|YP_001341223.1| exodeoxyribonuclease III [Marinomonas sp. MWYL1] gi|150837312|gb|ABR71288.1| exodeoxyribonuclease III [Marinomonas sp. MWYL1] Length = 289 Score = 191 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 86/271 (31%), Positives = 123/271 (45%), Gaps = 9/271 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H + A +++ PD+I LQE K D FP E +S+ YH GQK Sbjct: 19 MKFVSFNINGLRARPHQIEALVEKLAPDVIGLQEIKVHDDAFPHEIPESIGYHAYYYGQK 78 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 S+ GVAI SK + +I PGD+ D Q R I ATF +++ N Y P G Sbjct: 79 SHYGVAIFSKQEATKIEYGFPGDEEDAQRRMIIATFDTPQGPVKVLNGYFPQGESRDHEI 138 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFTL 177 L +E +I GD NI P + F Sbjct: 139 KFPAKRKFYADLMEYLAAHSPDEKIIVMGDINISPTDLDIGIGEPNAKRWLKTGKCSFLP 198 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSK--NKGIRIDHIMLSPEATS 234 E R+ F L N G TD R + T +S++DY + + +G+RID IM S Sbjct: 199 EEREWFATLANWGLTDTYRQLNPTKNDRFSWFDYRSKGFEDTPKRGLRIDVIMASNGLMP 258 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 L ++ +D R KPSDH P+ S ++ E Sbjct: 259 YLENSDVDYDLRALEKPSDHAPIWTSFNLSE 289 >gi|192361651|ref|YP_001982212.1| exonuclease III [Cellvibrio japonicus Ueda107] gi|190687816|gb|ACE85494.1| exodeoxyribonuclease III [Cellvibrio japonicus Ueda107] Length = 269 Score = 191 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 88/268 (32%), Positives = 129/268 (48%), Gaps = 10/268 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++NVNSIR R+H L A + +NPD I LQETK D +FP E +QSL YHIE GQK Sbjct: 1 MKAISFNVNSIRTRMHQLEAVVNNHNPDFIGLQETKVNDPDFPLEAIQSLGYHIEFFGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 ++ GVAILS++ +++ D D Q RFI F + + N Y P G Sbjct: 61 THYGVAILSRHPFKKVIKGFRTDSDDAQRRFIGGVFDTPIGEVTLLNGYFPQGESRDHPI 120 Query: 124 -YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACFT 176 + K + L++ ++ + ++ LI GD NI Q D + F Sbjct: 121 KFPGKAKFYADLLQYLTEEYQPQQQLIVMGDMNISHQDIDIGIGEENRKRWLRTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKN--KGIRIDHIMLSPEAT 233 E R+ KL G D R + + +S++DY + + N +G+RID I+ + Sbjct: 181 PEEREWLDKLLAWGLQDTYRELNPDSNEKFSWFDYRSGGFEDNPKRGLRIDLILATNPLI 240 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + ID RG KPSDH P+ S Sbjct: 241 NKCIDTGIDYDIRGMEKPSDHCPIWASF 268 >gi|88608769|ref|YP_506301.1| exodeoxyribonuclease III [Neorickettsia sennetsu str. Miyayama] gi|88600938|gb|ABD46406.1| exodeoxyribonuclease III [Neorickettsia sennetsu str. Miyayama] Length = 265 Score = 191 bits (484), Expect = 1e-46, Method: Composition-based stats. Identities = 83/262 (31%), Positives = 138/262 (52%), Gaps = 4/262 (1%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ VATWNVNSIR R ++A + N D++ LQE K ++ +FP L+Y++ Sbjct: 5 RILKVATWNVNSIRQRAEAVSALLVSENLDVLLLQELKCQESDFPLHVFNDLSYNVILKC 64 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 QK YNGVAI S++ +I +D +AR+IE + + +R+ ++Y+P+ S Sbjct: 65 QKGYNGVAIASRWPITKIS---DEIYMDGEARYIEGVISFFDKCIRLISIYIPNAQAAGS 121 Query: 122 TKYDDKISWIKR-FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 +++ K+ + R L + ++ GD N P+ D Y+P+ + F +E R Sbjct: 122 PRFEYKMQFHDALARRIHGYLLNNNDIMLLGGDMNAAPEDIDVYDPVKLDGCTGFHIEER 181 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 ++L N+G D R + T +S+WDY +N+G+RIDHI+ S E L Sbjct: 182 SKLRELLNLGLFDTFRMKYPTKQEFSWWDYRGGGLQRNEGMRIDHILASAEGMDHLLDCY 241 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I + R ++PSDH PV+ L+ Sbjct: 242 ILKELRHISRPSDHVPVVCVLN 263 >gi|308175988|ref|YP_003915394.1| exodeoxyribonuclease III [Arthrobacter arilaitensis Re117] gi|307743451|emb|CBT74423.1| exodeoxyribonuclease III [Arthrobacter arilaitensis Re117] Length = 266 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 72/264 (27%), Positives = 119/264 (45%), Gaps = 6/264 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+RAR + W++ + D++ +QETK +D NFP+E ++ +Y + G Sbjct: 1 MKIATWNVNSLRARADRVEDWLRRTDVDVLAIQETKCKDDNFPWELFENNDYEVAHFGVN 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLD----VQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +NGVAI S+ + PG +RI +LY+P+G + Sbjct: 61 QWNGVAIASRVGLENVERTFPGQPEFGKGGKNPIQEPRAIAATCGGVRIWSLYVPNGRAL 120 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIF--AGDYNIIPQPHDCYNPIIWENDACFTL 177 K++W+ + ++ LE GD+NI P+ D ++ + + + Sbjct: 121 DDEHMGYKLNWLDVLKKESAGWLEENPQAQIALMGDWNIAPKNEDVWDIDFFVENNLTHV 180 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 + T Y++WDY + K +G+RID + SP T+ + Sbjct: 181 SAPERAAFAAFEDLGFTDVVRPHTEGEYTYWDYTQLRFPKGEGMRIDFSLTSPALTARVI 240 Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261 A ID + R SDH PVIV L Sbjct: 241 GASIDREERKGKGASDHAPVIVEL 264 >gi|227547870|ref|ZP_03977919.1| possible exodeoxyribonuclease III [Corynebacterium lipophiloflavum DSM 44291] gi|227080055|gb|EEI18018.1| possible exodeoxyribonuclease III [Corynebacterium lipophiloflavum DSM 44291] Length = 259 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 71/259 (27%), Positives = 121/259 (46%), Gaps = 10/259 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+NVNS+R+R + A+++ N+ D++ +QETKT + FP+ ++ Y + G Sbjct: 1 MRIATFNVNSVRSRAERIVAFLERNDVDVLAMQETKTSEAKFPYAVFEAAGYEVAHVGTN 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVA+ S+ ++ T + + + +LY+P+G I Sbjct: 61 QWNGVALASRVGLEDVRT-QFDHQPAYEGSVEARAVGATCGGVEVWSLYVPNGREIGHPH 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 YD K+ ++ + + P +F GD+NI P+ ++ +E T R +F Sbjct: 120 YDYKLQFLYSLQHEVAAQ----TPQLFTGDFNIAPRDSSVWDIAWFEGKTHVTEPERAAF 175 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + L G + YSFWDY A + KN+G+ ID ++ +P L A +D Sbjct: 176 EMLLEAGLVEIR-----HDDAYSFWDYKAMRFQKNQGMLIDFLLATPPLAGKLVKAWVDV 230 Query: 244 KPRGWTKPSDHTPVIVSLD 262 R SDH PVI D Sbjct: 231 DERRGKGASDHAPVIADFD 249 >gi|119775274|ref|YP_928014.1| exodeoxyribonuclease III [Shewanella amazonensis SB2B] gi|119767774|gb|ABM00345.1| Exodeoxyribonuclease III [Shewanella amazonensis SB2B] Length = 268 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 80/268 (29%), Positives = 125/268 (46%), Gaps = 9/268 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V ++N+N +R+R+H L A I PDII LQETK D+ FP ++++ Y + G K Sbjct: 1 MKVVSFNINGLRSRLHQLQALIDTQAPDIIGLQETKVHDEAFPLADVEAMGYKVYFHGGK 60 Query: 64 SYNGVAILSKYQPIEIVTHL-PGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121 ++ GVA+LSK +P + + + I N + L + N Y P G Sbjct: 61 AHYGVALLSKVEPESVEKGYPWDAEDAQRRMIIGKFRQPNGRLLTVMNGYFPQGESRDHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175 K+ K + R ++ ++ +I GD NI P D + F Sbjct: 121 IKFPAKRKFYADLQRLLTESYSCDDDIIIMGDINISPLDLDIGIGPDNAKRWLRTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHL-YSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R+ Q L++ GF D+ R H YS++DY + + N+G+RID IM + T Sbjct: 181 LPEEREWLQTLKDWGFDDSFRVLHPEKDATYSWFDYRSKGFDDNRGLRIDVIMTTRSLTG 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 L ++ +D R KPSDH PV + Sbjct: 241 RLVASGVDYNIRAMEKPSDHAPVWSEFE 268 >gi|7592805|dbj|BAA94392.1| orf0 [Actinobacillus actinomycetemcomitans] Length = 264 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 79/264 (29%), Positives = 120/264 (45%), Gaps = 8/264 (3%) Query: 7 ATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYN 66 ++N+N +RAR H L I + PD++ LQE K D+ FP++ + L YH+ GQK + Sbjct: 1 MSFNINGLRARPHQLEEIINKYQPDVLGLQEIKVSDEVFPYDLVDHLGYHVNHFGQKGHY 60 Query: 67 GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST-KYD 125 GVA+LSK P+ + P DD + Q R I L + N Y P G K+ Sbjct: 61 GVALLSKQAPLSVRKGFPTDDEEAQKRIIMIDLETKFGQLTVINGYFPQGESREHPTKFP 120 Query: 126 DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFTLEV 179 K + R+ Q + P+I GD NI P + + F E Sbjct: 121 AKQKFYADLQRYLEQDHNAQNPVIIMGDMNISPSDLDIGIGEENRKRWLRTGKCSFLPEE 180 Query: 180 RQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R+ +Q+L G D R + T + +S++DY + + N+G+RIDHI+ + + Sbjct: 181 REWYQRLYAYGLEDTFRHMNPTVNDKFSWFDYRSKGFDDNRGLRIDHILANKALVAHCVD 240 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 I R KPSDH P+ Sbjct: 241 TGIALDIRAMNKPSDHAPIWAEFK 264 >gi|300860584|ref|ZP_07106671.1| exodeoxyribonuclease III [Enterococcus faecalis TUSoD Ef11] gi|300849623|gb|EFK77373.1| exodeoxyribonuclease III [Enterococcus faecalis TUSoD Ef11] Length = 251 Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats. Identities = 76/261 (29%), Positives = 115/261 (44%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + N E + D CLQETK + E L + + + Sbjct: 1 MKCISWNVNGLRAVVKKNFLDVFNELDADFFCLQETKLQAGQIDLE-LPGYHQYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K + + + L + D + R I + + Sbjct: 60 KGYSGTAIFAKEEALSVRYGLGIEAHDQEGRVITLEYPEF-----FMVTCYTPNSQAELK 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + +++W F + L E+P+I GD N+ Q D N + +A FT E RQ Sbjct: 115 RLAYRMTWEDAFRAY-LNELNQEKPVILCGDLNVAHQNIDLKNWKTNQKNAGFTPEERQK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L + GFTD R + +YS+W Y ++ N G RID+ ++S L SA+I Sbjct: 174 FTELLDSGFTDTFRYFYPEAEGIYSWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 T G SDH PV V LD Sbjct: 234 HTDILG----SDHCPVEVVLD 250 >gi|323703101|ref|ZP_08114756.1| exodeoxyribonuclease III [Desulfotomaculum nigrificans DSM 574] gi|323531995|gb|EGB21879.1| exodeoxyribonuclease III [Desulfotomaculum nigrificans DSM 574] Length = 262 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 93/262 (35%), Positives = 134/262 (51%), Gaps = 5/262 (1%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64 VA++N+NSIRAR LA W+ EN PD+ICLQETK DK+FP E Q + Y+ GQKS Sbjct: 4 KVASFNINSIRARQEMLANWLTENKPDVICLQETKVMDKDFPVEYFQEIGYNSLFKGQKS 63 Query: 65 YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124 YNGVAILS + I GD DV + + + N Y+P G S K+ Sbjct: 64 YNGVAILSPHPMTPI----AGDLGDVAEPGEARLIAAMVKDIPVVNTYVPQGQAPDSEKF 119 Query: 125 DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ 184 K++W+K + ++ +PL++ GD+N+ P+P D ++P F E + Sbjct: 120 AYKLAWLKALRDYFARNFSAHQPLLWMGDFNVAPEPIDVHDPKRLLGHVGFHPEEHKVLN 179 Query: 185 KLQNMGFTDAIRATHDTHHLYSFWDYY-ADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 ++ GF D R ++FWDY ++N G RIDHI + +A ID Sbjct: 180 YVKEWGFQDVFRKHQPEGGHFTFWDYRIRQGLARNLGWRIDHIWATAPLAEKSTNAWIDI 239 Query: 244 KPRGWTKPSDHTPVIVSLDIPE 265 +PR KPSDHT ++ + Sbjct: 240 EPRRLAKPSDHTFILAEFALSA 261 >gi|34581351|ref|ZP_00142831.1| exodeoxyribonuclease III [Rickettsia sibirica 246] gi|28262736|gb|EAA26240.1| exodeoxyribonuclease III [Rickettsia sibirica 246] Length = 260 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 97/259 (37%), Positives = 144/259 (55%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+NSI+ R++ L ++ + NPDI+ LQE K E FPF+ L L Y+ GQK Sbjct: 1 MKIATWNINSIKTRLNLLRNFLSKENPDILLLQEIKCETAKFPFDALSDLPYNSYVHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 SYNGVAI+SK+ EI+ P + QARF+E ++ I +LY P+G+ + S K Sbjct: 61 SYNGVAIISKFPADEIIKDFPNNYCSDQARFLEIKLSLPIGFCNIISLYAPNGSFVGSDK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+++ F+ + S + +E I GD+NI P D Y+P + CFT ++ Sbjct: 121 FVAKLAFYDNFINYLSTKKSFDEKTIIGGDFNIAPFDIDVYSPKLLAETTCFTEVEQKKL 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + + N GF D R H + +S+WDY A + +NKG+RID I+ L + +D Sbjct: 181 RTILNSGFEDLYRLMHPSKQEFSWWDYRAGCFEQNKGMRIDMILGCNNTIDYLENCYMDY 240 Query: 244 KPRGWTKPSDHTPVIVSLD 262 R KPSDH PVI S Sbjct: 241 NLRAQEKPSDHIPVIASFK 259 >gi|289549078|ref|YP_003474066.1| exodeoxyribonuclease III Xth [Thermocrinis albus DSM 14484] gi|289182695|gb|ADC89939.1| exodeoxyribonuclease III Xth [Thermocrinis albus DSM 14484] Length = 261 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 84/265 (31%), Positives = 144/265 (54%), Gaps = 6/265 (2%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 M++ V T+NVNSIR+R L W++ + D+ICLQETK E++ FPF + + YH Sbjct: 1 MAMFRVCTYNVNSIRSRRELLFMWLERSQVDVICLQETKVEERAFPFPDFEKIGYHCYVK 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 GQ++YNGVAI SK ++ D LD ++R I + + N+Y PHG+ Sbjct: 61 GQRTYNGVAICSKLPLQDVFKDTSMDILDKESRIIGGRLG----DIWLINVYFPHGDLRG 116 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K+ K+++ ++F +F ++ E+ +I GD N+ + D Y+P++ + E R Sbjct: 117 TPKFTYKLAFYQQFYQFLAENFSPEDKIILLGDMNVALEDIDVYDPVLLRDTIGTMEEER 176 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + +K+ GF D R + +++WDY + K++G+RID+I+++ + Sbjct: 177 SALRKILEWGFVDTFRYLYPNKVQFTWWDYIGGAVWKDQGMRIDYILVTKPLLPSVRDVY 236 Query: 241 IDTKPRGW--TKPSDHTPVIVSLDI 263 +D R KPSDH PV+ L++ Sbjct: 237 VDMWARKRRSPKPSDHAPVVCLLEL 261 >gi|253582729|ref|ZP_04859949.1| exodeoxyribonuclease III [Fusobacterium varium ATCC 27725] gi|251835305|gb|EES63846.1| exodeoxyribonuclease III [Fusobacterium varium ATCC 27725] Length = 253 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 68/261 (26%), Positives = 114/261 (43%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + K N DI C+QETK ++ + L+ + + + Sbjct: 1 MKLISWNVNGLRAAVQKGFLDYFKNENADIFCIQETKLQEGQIELD-LEGYHQYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +PIE+ L ++ D + R I + + Sbjct: 60 KGYSGTAIFTKKKPIEVSYGLGIEEHDKEGRVITLEYEDFYMITVYTPNSQEELARLDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + R +L+ +P+I GD N+ + D NP +A F+ E R Sbjct: 120 M------SWEDEFRNYVMKLDKLKPVIICGDLNVAHKEIDLKNPKSNRKNAGFSDEERAK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L GF D+ R + YS+W Y ++ N G RID+ ++S ++ A I Sbjct: 174 FTELLENGFIDSFRHFYPEVTGAYSWWSYRFNARKNNAGWRIDYFVVSERLKDIMEGAEI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 + G SDH PV++ L Sbjct: 234 HNEILG----SDHCPVVLKLK 250 >gi|77465425|ref|YP_354928.1| exodeoxyribonuclease III [Rhodobacter sphaeroides 2.4.1] gi|77389843|gb|ABA81027.1| Exodeoxyribonuclease III [Rhodobacter sphaeroides 2.4.1] Length = 255 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 96/259 (37%), Positives = 147/259 (56%), Gaps = 4/259 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+NVN + R+ L W++E PD++CLQE K FP L++ Y GQK Sbjct: 1 MRIATFNVNGVNGRLPVLLRWLEEARPDVVCLQELKAASARFPAAALEAAGYGAVWHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 S+NGVAIL++ D ++R+IEA + +G LYLP+GNP K Sbjct: 61 SWNGVAILARGAEPVQTRQDLPGVQDGESRYIEAAVEG----VLVGCLYLPNGNPAPGPK 116 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K++W L A + L + P++ AGD+N++P D + P W DA EVR +F Sbjct: 117 FAAKLAWFDHLLNHAEEVLRHDVPVVLAGDFNVMPTDLDVHRPERWREDALCRPEVRAAF 176 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +L G+TD+IR + +Y+FWDY ++W ++ G+R+DH++LSP + L A +D Sbjct: 177 ARLLAQGWTDSIRHLYPEDRIYTFWDYLRNAWERDAGLRLDHLLLSPSLLTRLKGAGVDR 236 Query: 244 KPRGWTKPSDHTPVIVSLD 262 RGW K SDH PV +++D Sbjct: 237 HVRGWEKASDHAPVWIAID 255 >gi|296138207|ref|YP_003645450.1| exodeoxyribonuclease III Xth [Tsukamurella paurometabola DSM 20162] gi|296026341|gb|ADG77111.1| exodeoxyribonuclease III Xth [Tsukamurella paurometabola DSM 20162] Length = 289 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 84/262 (32%), Positives = 125/262 (47%), Gaps = 7/262 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETC 60 + VATWNVNS++ R L W+ PD++CLQE K D F L Y T Sbjct: 1 MRVATWNVNSVKQRHGRLLEWLDSRQPDVVCLQELKLTDDAFATLIGPDLTERGYEFATA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 GQ +NG A+LS+ ++V +PG A + +R+ +LY P+G + Sbjct: 61 GQPQWNGSAVLSRVGLDDVVVGIPGAPAFDGTVEGRAISAVCAG-IRVHSLYTPNGREVG 119 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 S Y K+ W+ S P + GD NI P D ++P + T R Sbjct: 120 SDHYAYKLEWLAALRDQVSAD---SVPQLVCGDMNIAPTDEDVFDPAAFAGHTHVTEPER 176 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + + L+++G D +R T ++S+WDY A ++KN G+RID I+ S +A Sbjct: 177 DALRALEDLGLRDVVREHWPTDQVFSYWDYRAGMFNKNLGMRIDLILASGPVADRTAAAW 236 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 ID + R PSDH PV++ LD Sbjct: 237 IDRQARKGKGPSDHAPVMLDLD 258 >gi|171463432|ref|YP_001797545.1| exodeoxyribonuclease III Xth [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171192970|gb|ACB43931.1| exodeoxyribonuclease III Xth [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 288 Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats. Identities = 84/278 (30%), Positives = 134/278 (48%), Gaps = 17/278 (6%) Query: 4 VTVATWNVNSIRARIHNLAAWI-----KENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 V +A WNVNS++ R+ + W+ K D +CLQE K D +P + L+ Y Sbjct: 5 VRIAAWNVNSLKVRLPQVLRWLQDQENKRQPIDALCLQELKLTDDKYPHKELEDAGYLSL 64 Query: 59 TCGQKSYNGVAIL------------SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 GQK+YNGVAI+ + ++ + ++P + Q T + Sbjct: 65 AAGQKTYNGVAIIVRKAALAPIASDTATSFLKPIRNIPNFKDEQQRILAATIPFAGTPAM 124 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 R+ + Y P+G S K+ K+ W+K + + LE L GD+NI P D ++ Sbjct: 125 RLVSAYFPNGQSPDSDKFVYKLGWLKALHTWLGEELENNSRLALLGDFNIAPADEDVHDS 184 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226 +WE + + R++FQ L +G D+ R ++S+WDY + +N G+RIDHI Sbjct: 185 KVWEGQSLVSPPEREAFQGLIKLGLNDSFRMFEQAPKVFSWWDYRMMGFRRNAGMRIDHI 244 Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 +LS ++ +D +PR W +PSDH PVI P Sbjct: 245 LLSEALKDQCIASTVDKEPRTWEQPSDHAPVIAEFKKP 282 >gi|154484298|ref|ZP_02026746.1| hypothetical protein EUBVEN_02011 [Eubacterium ventriosum ATCC 27560] gi|149734775|gb|EDM50692.1| hypothetical protein EUBVEN_02011 [Eubacterium ventriosum ATCC 27560] Length = 251 Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 69/262 (26%), Positives = 113/262 (43%), Gaps = 13/262 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN IRA + + E + DI C+QE+K ++ E Y + Sbjct: 1 MKLISWNVNGIRACVTKGFMDFFNEIDADIFCIQESKMQEGQLELEMPGYYQY-WNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +P+++ + ++ D + R I F + Sbjct: 60 KGYSGTAIFTKKEPMDVKYGIGIEEHDHEGRVITLEFEDFYMVTCYTPNSQNELKRLDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + ++LE +P++ GD N+ + D NP +A FT E R+ Sbjct: 120 MQ------WEDDFKAYLKKLEESKPVVLCGDLNVAHKEIDLKNPKTNRKNAGFTDEEREK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 KL + GF D R + YS+W Y + KN G RID+ ++S L A I Sbjct: 174 MTKLLDDGFIDTFRYFYPDLEGKYSWWSYRFKAREKNAGWRIDYFIVSEALKDKLEGADI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 T+ G SDH P+ + L+I Sbjct: 234 HTEILG----SDHCPIELDLNI 251 >gi|315186595|gb|EFU20354.1| exodeoxyribonuclease III Xth [Spirochaeta thermophila DSM 6578] Length = 256 Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 60/262 (22%), Positives = 100/262 (38%), Gaps = 9/262 (3%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 +V+V +WNVN IRA L WI++ P+I+CLQETK P E + YH Sbjct: 1 MVSVYSWNVNGIRAAAKKGLLDWIEKERPEILCLQETKARRDQLPSELARPDGYHTYWAE 60 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 + + G + + E I + + Sbjct: 61 ADKPGYSGVALFTLYEPVSVEPLGVEAFDR----EGRTLIADFGSFVFFGCYFPNSQEAG 116 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + D K+++ A + ++ +GD+NI P D P E + + E R+ Sbjct: 117 ARLDYKLAYCNAVKERADAYVAAGRHVLISGDFNIAHTPLDLARPEANEKNPGYLPEERE 176 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 + G+ D R Y++W Y + K+ G RID+ ++ + + I Sbjct: 177 WMTYFLSSGYVDTFRMFTKEGGHYTWWTYRFKAREKDIGWRIDYHCVNEGFKDKVKESVI 236 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 G SDH PV ++LD+ Sbjct: 237 LKNVMG----SDHCPVKITLDV 254 >gi|329955159|ref|ZP_08296116.1| exodeoxyribonuclease III [Bacteroides clarus YIT 12056] gi|328526158|gb|EGF53177.1| exodeoxyribonuclease III [Bacteroides clarus YIT 12056] Length = 254 Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 79/261 (30%), Positives = 134/261 (51%), Gaps = 12/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60 + + T+NVN +RA + W+ PD++CLQETK + + +P E L + Y ++ + Sbjct: 1 MKIITYNVNGLRAAVTKGFPEWLANEQPDVLCLQETKLQPEQYPAEALDASGYKHYLYSA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GVAIL+K +P + + ++ D + RFI A + L I ++Y P G Sbjct: 61 RKKGYSGVAILTKREPDHVEYGMGIEEYDNEGRFIRADYG----DLSIVSVYHPSG-TSG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K+ W+++F ++ + LI GDYNI + D ++P+ ++ F E R Sbjct: 116 DERQAFKMVWLEKFQQYVVELQRTRPKLILCGDYNICHEAIDIHDPVRNATNSGFLPEER 175 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + + N GF D R H Y++W Y +S +KNKG RID+ M++ +L AR Sbjct: 176 EWMTRFLNAGFIDTFRLLHPDKQEYTWWSYRFNSRAKNKGWRIDYCMVNEPVRPMLKEAR 235 Query: 241 IDTKPRGWTKPSDHTPVIVSL 261 I SDH P+++ + Sbjct: 236 ILNDA----VHSDHCPMMLEI 252 >gi|255655350|ref|ZP_05400759.1| putative exodeoxyribonuclease [Clostridium difficile QCD-23m63] gi|296451338|ref|ZP_06893076.1| exodeoxyribonuclease III [Clostridium difficile NAP08] gi|296259754|gb|EFH06611.1| exodeoxyribonuclease III [Clostridium difficile NAP08] Length = 250 Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 72/261 (27%), Positives = 117/261 (44%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN IRA + KE + D+ CLQETK ++ + L + + Sbjct: 1 MRFISWNVNGIRACAGKGFLDFFKEVDADVFCLQETKLQEGQIELD-LPGYFQYWNYAER 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +P++++ + ++ D + R I F +Y P+ Sbjct: 60 KGYSGTAIFTKKEPLKVMYGINIEEHDKEGRVITLEFE----DFYFVTVYTPNSQSELKR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + + +L+ +P+I GD N+ + D NP +A FT E R+ Sbjct: 116 L--EYRTRWEDDFIDYLTKLDNHKPVIVCGDMNVAHKEIDLKNPKNNMKNAGFTKEEREK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F KL + GF D R + +YS+W Y ++ N G RID+ S + L SA I Sbjct: 174 FSKLLDSGFIDTYRYFNPDKEGVYSWWSYRFNARKNNAGWRIDYFCASKKLEDRLISADI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 T+ G SDH PV + + Sbjct: 234 HTEVLG----SDHCPVELEIK 250 >gi|304385589|ref|ZP_07367933.1| exodeoxyribonuclease III [Pediococcus acidilactici DSM 20284] gi|304328093|gb|EFL95315.1| exodeoxyribonuclease III [Pediococcus acidilactici DSM 20284] Length = 251 Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 71/262 (27%), Positives = 120/262 (45%), Gaps = 13/262 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + E + DI C+QETK ++ + L + + + Sbjct: 1 MKLISWNVNGLRAAVKHGFLDVFNELDADIFCVQETKLQEGQIDLD-LPGYHQYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G A+ +K +P+ + L + D + R I + + Sbjct: 60 KGYSGTAVFTKREPVAVSYGLGIPEFDQEGRVITLEYEKF-----FLVTCYTPNSQPELR 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + D +++W F + Q L +P+IF GD N+ + D N ++A FT E RQ Sbjct: 115 RLDYRMNWDDAFRAYVKQ-LADTKPVIFCGDLNVAHEEIDLKNDRTNHHNAGFTDEERQK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L GFTD R + +YS+W Y ++ + N G RID+ + S L A+I Sbjct: 174 FTELLQSGFTDTYRYFYPDKEGVYSWWSYRFNARANNAGWRIDYFVTSQALDKQLADAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 T+ G SDH P+ + L++ Sbjct: 234 HTEIFG----SDHCPIELDLNL 251 >gi|262198814|ref|YP_003270023.1| exodeoxyribonuclease III Xth [Haliangium ochraceum DSM 14365] gi|262082161|gb|ACY18130.1| exodeoxyribonuclease III Xth [Haliangium ochraceum DSM 14365] Length = 260 Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 77/264 (29%), Positives = 122/264 (46%), Gaps = 11/264 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+N +RAR+ + W++ PDI+ LQE K + FP++ L L YH GQK Sbjct: 1 MKIATWNINGMRARLDFVLHWLRARQPDIVGLQELKLTEDQFPYDALSELGYHAVVVGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 ++NGVA+LS+ + LPG D + + Y P+G + Sbjct: 61 AWNGVAVLSREPAELVHAGLPGQDELGARLVC-----VRVADMAFTTAYCPNGKSTSHPD 115 Query: 124 YDDKISWIKRFLRF---ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K+ W + S+ + GD+N+ P P D YN + T R Sbjct: 116 FLRKLGWFDALIGQLGTLSEVAGASAGAVLCGDFNLCPTPLDSYNEDLLRGSIFHTDAER 175 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + +Q++ + GF D RA H +S+WDY ++ K +G+RID ++ + + + Sbjct: 176 ERYQRILDHGFVDLFRAAHPEERAFSWWDYRGGAFHKRQGLRIDFVLGTADIAARTERVE 235 Query: 241 IDTKPRG---WTKPSDHTPVIVSL 261 ID R SDH PVI L Sbjct: 236 IDRTYRKKHDGLTASDHAPVIAEL 259 >gi|312144054|ref|YP_003995500.1| exodeoxyribonuclease III Xth [Halanaerobium sp. 'sapolanicus'] gi|311904705|gb|ADQ15146.1| exodeoxyribonuclease III Xth [Halanaerobium sp. 'sapolanicus'] Length = 254 Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 77/262 (29%), Positives = 122/262 (46%), Gaps = 12/262 (4%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN IRA WI+E PD++ LQE + + + + YH Sbjct: 1 MRIYSWNVNGIRAVNRKGFLDWIEEEKPDVLALQEIRIQPEQLKDKLKNIDGYHSYFNYG 60 Query: 63 KS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + Y+GVAI SK +P+++ + D + R I A + + N+Y P+G + Sbjct: 61 EKAGYSGVAIYSKEEPLDVWKGFGIERFDYEGRVIAAEYP----EFYLLNIYFPNGK-SS 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + + K+ + L +A + E + ++ +GDYN P D NP +N + F R Sbjct: 116 KERLNYKLDFYDATLEYAEELREEGKGVVVSGDYNTAHHPLDLKNPDANKNTSGFLEIER 175 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + KL+N GF D R + YS+W Y + +N G RID+ +S E L+ + Sbjct: 176 EWLDKLENHGFIDTYRYFYPDKETYSWWSYRTRARERNAGWRIDYHFISEELEDNLNHSD 235 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I T G SDH PV V L Sbjct: 236 ILTDVMG----SDHCPVTVDLK 253 >gi|160933576|ref|ZP_02080964.1| hypothetical protein CLOLEP_02430 [Clostridium leptum DSM 753] gi|156867453|gb|EDO60825.1| hypothetical protein CLOLEP_02430 [Clostridium leptum DSM 753] Length = 261 Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 71/261 (27%), Positives = 117/261 (44%), Gaps = 12/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + + ++ + DI CLQETK + L + + + Sbjct: 12 MRFISWNVNGLRACLTKGFPEFFQQIDADIFCLQETKLQQGQVEM-VLPGYRQYWNSAVK 70 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G A+ SK +P+ + L ++ D + R I F T ++ Sbjct: 71 KGYSGTAVFSKKEPLSVSYGLGIEEHDQEGRVITLEFPAFYLTTVYTPNSQEGLKRLSYR 130 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + R + L+ ++P++ GD N+ Q D NP +A FT E R+ Sbjct: 131 M------EWEDAFRDYLKGLDSKKPVVVCGDMNVAHQEIDLKNPKTNRKNAGFTDEERER 184 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F +L GF D+ R+ + YS+W Y ++ N G RID+ ++S + A+I Sbjct: 185 FSQLLAAGFIDSYRSLYPEKIEYSWWSYRFNARKNNAGWRIDYFLVSDRIGGRIQDAKIH 244 Query: 243 TKPRGWTKPSDHTPVIVSLDI 263 T+ G SDH PV + LDI Sbjct: 245 TQVMG----SDHCPVELDLDI 261 >gi|67458642|ref|YP_246266.1| exodeoxyribonuclease III [Rickettsia felis URRWXCal2] gi|67004175|gb|AAY61101.1| Exodeoxyribonuclease III [Rickettsia felis URRWXCal2] Length = 260 Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 97/259 (37%), Positives = 144/259 (55%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+NSI+ R++ L ++ + NPDI+ LQE K E + FPF+ L L Y+ GQK Sbjct: 1 MKIATWNINSIKTRLNLLRNFLSKENPDILLLQEIKCETEKFPFDELSDLPYNFYVHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 SYNGVAI+SK+ EI+ P + QARF+E ++ I +LY P+G+ + S K Sbjct: 61 SYNGVAIISKFPADEIIKDFPNNYCSDQARFLEIKLSLPIGFCNIISLYAPNGSFVGSDK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+++ F+ + S + +E I GD+NI P D Y+P CFT ++ Sbjct: 121 FVAKLAFYDNFINYLSTKKSFDEKTIIGGDFNIAPFDIDVYSPKALAETTCFTEIEQKKL 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + + N GF D R H + +S+WDY A + +NKG+RID I+ L + +D Sbjct: 181 RTILNSGFEDLYRLRHPSKQEFSWWDYRAGCFEQNKGMRIDMILGCNNTIDYLENCYMDY 240 Query: 244 KPRGWTKPSDHTPVIVSLD 262 R KPSDH PVI S Sbjct: 241 NLRTQEKPSDHIPVIASFK 259 >gi|261854637|ref|YP_003261920.1| exodeoxyribonuclease III Xth [Halothiobacillus neapolitanus c2] gi|261835106|gb|ACX94873.1| exodeoxyribonuclease III Xth [Halothiobacillus neapolitanus c2] Length = 257 Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 78/258 (30%), Positives = 134/258 (51%), Gaps = 2/258 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+ R + +W+ + P I+ LQE K ++ ++ Y GQK Sbjct: 1 MKIATWNVNSLNVRKPQVLSWLAQQQPAILGLQELKQVNEAIDNSDFAAMGYQTLLNGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVA++ + + E + + LR+ N Y+ +G I S K Sbjct: 61 TYNGVALIYQEELGEPSDVVCDIPALDDPQ--RRVIAATFGELRVINAYVVNGEAIDSEK 118 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K++W++ F + + + L+ GD+NI P D ++P +++ + R F Sbjct: 119 YQYKLNWLEAFSNWLALEIAQHPNLVVMGDFNIAPSDADVFDPERFKDAVLCSPPERDYF 178 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +L MGFTDA+ + + +++WDY + +N G+RIDHI+ SP + + +D Sbjct: 179 NRLLAMGFTDALNCFSNEENNFTWWDYRGGGYRRNHGLRIDHILTSPAVQAKATACHVDK 238 Query: 244 KPRGWTKPSDHTPVIVSL 261 +PRGW +PSDH PV+++L Sbjct: 239 EPRGWERPSDHAPVVLTL 256 >gi|270290148|ref|ZP_06196374.1| exodeoxyribonuclease III [Pediococcus acidilactici 7_4] gi|270281685|gb|EFA27517.1| exodeoxyribonuclease III [Pediococcus acidilactici 7_4] Length = 251 Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats. Identities = 71/262 (27%), Positives = 120/262 (45%), Gaps = 13/262 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + E + DI C+QETK ++ + L + + + Sbjct: 1 MKLISWNVNGLRAAVKHGFLDVFNELDADIFCVQETKLQEGQIDLD-LPGYHQYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G A+ +K +P+ + L + D + R I + + Sbjct: 60 KGYSGTAVFTKREPVAVSYGLGIPEFDQEGRVITLEYEEF-----FLVTCYTPNSQPELR 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + D +++W F + Q L +P+IF GD N+ + D N ++A FT E RQ Sbjct: 115 RLDYRMNWDDAFRAYVKQ-LADTKPVIFCGDLNVAHEEIDLKNDRTNHHNAGFTDEERQK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L GFTD R + +YS+W Y ++ + N G RID+ + S L A+I Sbjct: 174 FTELLQSGFTDTYRYFYPDKEGVYSWWSYRFNARANNAGWRIDYFVTSQALDKQLADAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 T+ G SDH P+ + L++ Sbjct: 234 HTEIFG----SDHCPIELDLNL 251 >gi|169347307|ref|ZP_02866245.1| hypothetical protein CLOSPI_00022 [Clostridium spiroforme DSM 1552] gi|169293924|gb|EDS76057.1| hypothetical protein CLOSPI_00022 [Clostridium spiroforme DSM 1552] Length = 252 Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 67/263 (25%), Positives = 113/263 (42%), Gaps = 13/263 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN IRA I +K+ + DI C+QETK ++ E Y + + + Sbjct: 1 MKLISWNVNGIRACINKGFYDILKDFDADIFCIQETKMQEGQIEIEDHGYYLY-MNSAVK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G + +K +P+ + ++ D + R I + + + N Sbjct: 60 KGYSGTLVFTKVKPLSYSYGINIEEHDQEGRVITLEYN------KFYLVNCYTPNSQDGL 113 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K + + + LE ++P+I GD N+ Q D NP +A F+ E R Sbjct: 114 KRLEYRQVWEDDFLAYLKSLEEKKPVILCGDLNVAHQEIDLKNPKTNRKNAGFSDEERAK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +L N GF D R + YS+W Y ++ N G RID+ ++S + A I Sbjct: 174 MTQLLNHGFIDTFRYLYPDLQGAYSWWSYRFNARKNNAGWRIDYFIVSDCLKEKIKDAYI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLDIP 264 G SDH PV + +++ Sbjct: 234 FKDIMG----SDHCPVGLDIELD 252 >gi|82913491|ref|XP_728665.1| exodeoxyribonuclease III [Plasmodium yoelii yoelii str. 17XNL] gi|23485131|gb|EAA20230.1| exodeoxyribonuclease III [Plasmodium yoelii yoelii] Length = 271 Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 82/264 (31%), Positives = 129/264 (48%), Gaps = 13/264 (4%) Query: 4 VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET--C 60 + + T NVN IR A W+ + N DI+CLQE K + E +Y Sbjct: 15 MRIITLNVNGIRSAARKGFFDWLPKQNADIVCLQEIKAQTTQLNDELFWPESYACYYLEA 74 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GVA+ ++ +P +++ L DD+D +AR++EA F L + +LY+P G+ Sbjct: 75 EKKGYSGVALYARKEPDDVIQGLGWDDMDTEARYLEARFG----ELSVVSLYIPSGSSSE 130 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 K ++ RFL F IF GD+NI +P D N + ++ F E R Sbjct: 131 QR-QAVKFXFLDRFLPFLDDCARSGRQYIFCGDWNIAHKPIDLKNWRSNQKNSGFLPEER 189 Query: 181 QS-FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + + G+ DA RA + Y++W +W+KN G RID+ ++SP L+ SA Sbjct: 190 AWLDRVFEEAGWVDAFRAVNPEPEQYTWWSNRGQAWAKNVGWRIDYQVVSPGLRELIRSA 249 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 I + R SDH P+I+ D+ Sbjct: 250 AIYKEER----FSDHAPLIIDYDL 269 >gi|326772453|ref|ZP_08231737.1| exodeoxyribonuclease III [Actinomyces viscosus C505] gi|326637085|gb|EGE37987.1| exodeoxyribonuclease III [Actinomyces viscosus C505] Length = 269 Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats. Identities = 73/270 (27%), Positives = 121/270 (44%), Gaps = 16/270 (5%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSIR R+ + A+++ + D + +QE K FP E ++ Y + G Sbjct: 1 MRLATWNVNSIRTRVDRVLAFLEREDIDALAMQEIKCRPDQFPVEPFEAAGYELAIHGLN 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-----------TQTLRIGNLY 112 +NGVAI S+ ++ PG E +R+ +LY Sbjct: 61 QWNGVAIASRVGLDDVAVSFPGQPAWAAKPEAEPVVEARALGATVGAASDAAPVRLWSLY 120 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWE 170 +P+G +T Y K+ W++ + LE + L GD+N+ P+ D ++ +E Sbjct: 121 VPNGRELTHPHYTYKLDWLRVLRDDVAAWLEADPDLPLALVGDWNVAPRDEDVWDMSAFE 180 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230 + R++F +G + R + Y++WDY + +N+G+RID + SP Sbjct: 181 GATHVSEPEREAFAAFAEVGMREVTR---ERVTNYTYWDYQKLRFPRNEGMRIDFVYASP 237 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 + A ID R SDH PVIV Sbjct: 238 ALAGRVTDAAIDRDERKGKGASDHVPVIVE 267 >gi|238650992|ref|YP_002916848.1| exodeoxyribonuclease III [Rickettsia peacockii str. Rustic] gi|238625090|gb|ACR47796.1| exodeoxyribonuclease III [Rickettsia peacockii str. Rustic] Length = 260 Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats. Identities = 97/259 (37%), Positives = 144/259 (55%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+NSI+ R++ L ++ + NPDI+ LQE K E FPF+ L L Y+ GQK Sbjct: 1 MKIATWNINSIKTRLNLLRNFLSKENPDILLLQEIKCETAKFPFDALSDLPYNSYVHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 SYNGVAI+SK+ EI+ P + QARF+E ++ I +LY P+G+ + S K Sbjct: 61 SYNGVAIISKFPADEIIKDFPNNYCSDQARFLEIKLSLPIGFCNIISLYAPNGSFVGSDK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+++ F+ + S + +E I GD+NI P D Y+P + CFT ++ Sbjct: 121 FVAKLAFYDNFINYLSTKKSFDEKTIIGGDFNIAPFDIDVYSPKLLAETTCFTEVEQKKL 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + + N GF D R H + +S+WDY A + +NKG+RID I+ L + +D Sbjct: 181 RTILNSGFEDLYRLMHPSKQEFSWWDYRAGCFEQNKGMRIDMILGCNNTIDYLENCYMDY 240 Query: 244 KPRGWTKPSDHTPVIVSLD 262 R KPSDH PVI S Sbjct: 241 NLRTQEKPSDHIPVIASFK 259 >gi|269791683|ref|YP_003316587.1| exodeoxyribonuclease III Xth [Thermanaerovibrio acidaminovorans DSM 6589] gi|269099318|gb|ACZ18305.1| exodeoxyribonuclease III Xth [Thermanaerovibrio acidaminovorans DSM 6589] Length = 259 Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats. Identities = 80/264 (30%), Positives = 123/264 (46%), Gaps = 6/264 (2%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 MS+ V T+NVNSI+AR+ + A + PD++CLQETKT D+ FP E ++ Y + Sbjct: 1 MSIFKVVTFNVNSIKARVPIVEALLDREGPDVLCLQETKTVDREFPREIFEARGYRVLVR 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 G K+YNGVA + + + P + R + + N Y+P G I Sbjct: 61 GMKAYNGVAAAIRGEEQDSFAGFPSGEEMDPYRLLGVRLDGM----WLVNCYVPQGKEID 116 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 Y K+ ++ R LE + ++ GD N+ P D NP + CF +VR Sbjct: 117 HPDYAYKLRFLSRLAELVR-ELEGDGEVLLVGDLNVAPTEADVTNPKNKADHVCFHRDVR 175 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYY-ADSWSKNKGIRIDHIMLSPEATSLLHSA 239 ++F+ L G D R +SFWDY + +N G RIDHI+ + + Sbjct: 176 EAFEGLLGAGLVDVFRRHRPGEGEFSFWDYRVKGALERNIGWRIDHILATRGLADRSVDS 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 + R +PSDH PV+ ++ Sbjct: 236 AVLRDYRAMERPSDHGPVMGVFEL 259 >gi|241068614|ref|XP_002408486.1| Apurinic/apyrimidinic endonuclease, putative [Ixodes scapularis] gi|215492474|gb|EEC02115.1| Apurinic/apyrimidinic endonuclease, putative [Ixodes scapularis] Length = 266 Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats. Identities = 97/259 (37%), Positives = 145/259 (55%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + TWN+NSI+ R++ L ++ + NPDI+ LQE K E + FPF+ L +L Y+ GQK Sbjct: 5 MKIVTWNINSIKTRLNLLRNFLSKENPDILLLQEIKCETEKFPFDELSNLPYNFYVHGQK 64 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 SYNGVAI+SK+ EI+ P + QARF+E ++ I +LY P+G+ I S K Sbjct: 65 SYNGVAIISKFPADEIIKDFPNNYYSDQARFLEIKLSLPIGFCNIISLYAPNGSFIGSDK 124 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+++ F+ + S + +E I GD+NI P D Y+P + CFT ++ Sbjct: 125 FVAKLAFYDNFINYLSTKKSFDEKTIIGGDFNIAPFDIDVYSPKLLAETTCFTEIEQKKL 184 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + + N GF D R H + +S+WDY A + +NKG+RID I+ L + +D Sbjct: 185 RTILNSGFEDLYRLMHPSKQEFSWWDYRAGCFEQNKGMRIDMILGCNNTIDYLENCYMDY 244 Query: 244 KPRGWTKPSDHTPVIVSLD 262 R KPSDH PVI S Sbjct: 245 NLRTQEKPSDHIPVIASFK 263 >gi|237786239|ref|YP_002906944.1| exodeoxyribonuclease III [Corynebacterium kroppenstedtii DSM 44385] gi|237759151|gb|ACR18401.1| exodeoxyribonuclease III [Corynebacterium kroppenstedtii DSM 44385] Length = 262 Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats. Identities = 67/265 (25%), Positives = 119/265 (44%), Gaps = 11/265 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS+R R+ + + ++ D++ +QETK + FP + Y + G Sbjct: 1 MRLATWNVNSVRTRLPRIIDVLNRHDIDVLAMQETKCSEDQFPRDAFTDAGYEVAVSGTN 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDV----QARFIEATFTINTQTLRIGNLYLPHGNPI 119 +NGVAI S+ ++ T + + + + +LY+P+G I Sbjct: 61 QWNGVAIASRVGLTDVHTLPHQPGFSKELTAEQAIEPRSIAATCGGIIVMSLYIPNGREI 120 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL 177 ++ + K+ ++ +A+ ++ + L GD+NI P D ++P + T Sbjct: 121 SNIHFTYKLRFLDAVRNYAATAVDNDPELRLALVGDWNIAPHDTDVWDPQFFVGHTQVTP 180 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 R + L++ GFTD + Y++WDY A + +N+G+RID SP Sbjct: 181 RERNALTALEDEGFTDVTHNSG-----YTYWDYTAGRFGRNQGMRIDVQWASPALAENAG 235 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLD 262 + R SDH P+IV D Sbjct: 236 EVSVYKDERAAKGSSDHAPLIVDYD 260 >gi|166710239|ref|ZP_02241446.1| exodeoxyribonuclease III [Xanthomonas oryzae pv. oryzicola BLS256] Length = 259 Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats. Identities = 86/259 (33%), Positives = 135/259 (52%), Gaps = 6/259 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A+WNVNS+ R+ +L W+ P+++ +QETK ED FP L L Y CGQK Sbjct: 1 MKIASWNVNSLNVRLPHLQQWLTAFAPEVVGIQETKLEDHRFPDAALAELGYRSVFCGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAILS+ +++ +PG D Q +RI NLY+ +G + + K Sbjct: 61 TYNGVAILSRSPALDVQMGIPGFDDVQQRVIAATVDG-----VRIINLYVVNGQDVGTDK 115 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN-PIIWENDACFTLEVRQS 182 Y K+ W+ + +Q L+ L+ GD+NI P D ++ + E+ + + R + Sbjct: 116 YAYKLRWLAAAHDWIAQELQTYPQLVVLGDFNIAPDARDVHDATVWNEHHILTSTDERAA 175 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 +KL +G DA R +S+WDY + +N G+RID ++S + + ID Sbjct: 176 LEKLLALGLHDAFRLHTQDAEHFSWWDYRQAGFRRNLGLRIDLTLVSDALRTRAVESGID 235 Query: 243 TKPRGWTKPSDHTPVIVSL 261 +PR W +PSDH P V L Sbjct: 236 REPRTWERPSDHAPAWVRL 254 >gi|330996654|ref|ZP_08320532.1| exodeoxyribonuclease III [Paraprevotella xylaniphila YIT 11841] gi|329572726|gb|EGG54359.1| exodeoxyribonuclease III [Paraprevotella xylaniphila YIT 11841] Length = 250 Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats. Identities = 74/260 (28%), Positives = 114/260 (43%), Gaps = 13/260 (5%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + D CLQETK ++ E + + + Sbjct: 1 MKFISWNVNGLRACCEKGFKESFAALDADFFCLQETKMQEGQLDLE-FEGYRSYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI S++ P+ + L ++ D + R I + Sbjct: 60 KGYSGTAIFSRHAPLNVTYGLGLEEHDREGRVITLEMPDF-----FLVTVYTPNSQDGLK 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + D ++ W + F + Q L+ +P+I GD N+ + D NP +A FT E R+ Sbjct: 115 RLDYRMQWEEAFRAYLLQ-LDTRKPVIVCGDLNVAHREIDLKNPKSNRKNAGFTDEEREK 173 Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F L + GFTD R + +YS+W Y + KN G RID+ ++S + L SA I Sbjct: 174 FGILLDSGFTDTFRFFYPDREGIYSWWSYRFKAREKNAGWRIDYFLVSKRLEAQLKSATI 233 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 T+ G SDH PV V L Sbjct: 234 HTEIFG----SDHCPVEVDL 249 >gi|303237381|ref|ZP_07323951.1| exodeoxyribonuclease III [Prevotella disiens FB035-09AN] gi|302482768|gb|EFL45793.1| exodeoxyribonuclease III [Prevotella disiens FB035-09AN] Length = 250 Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats. Identities = 68/260 (26%), Positives = 111/260 (42%), Gaps = 12/260 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + + + D CLQETK + + + Sbjct: 1 MKFISWNVNGLRACVTKGFKESFEAIDADFFCLQETKMQAGQLDI-AFDGYESYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K+QP+ + L ++ D + R I + Sbjct: 60 KGYSGTAIFTKHQPLNVTYGLGIEEHDHEGRVITLEMENFYL-----VTCYTPNSQDGLK 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + ++ W F + + L+ ++P+I GD N+ + D NP +A F+ E R Sbjct: 115 RLEYRMRWEDDFQTYIKR-LDEKKPVIVCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAK 173 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 + GF D+ R + YS+W Y + KN G RID+ +LS + L A+I Sbjct: 174 MTQFLGKGFIDSFRTLYPEQVTYSWWSYRFKAREKNAGWRIDYFLLSDRLRAQLVDAKIH 233 Query: 243 TKPRGWTKPSDHTPVIVSLD 262 T+ G SDH PV V L+ Sbjct: 234 TEVYG----SDHCPVEVELN 249 >gi|288560813|ref|YP_003424299.1| exodeoxyribonuclease III Xth2 [Methanobrevibacter ruminantium M1] gi|288543523|gb|ADC47407.1| exodeoxyribonuclease III Xth2 [Methanobrevibacter ruminantium M1] Length = 258 Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats. Identities = 66/267 (24%), Positives = 122/267 (45%), Gaps = 13/267 (4%) Query: 1 MSVVTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HI 57 M+ + + +WNVN IRA W E DI+ LQETK + + P + + Y + Sbjct: 1 MTKIRLISWNVNGIRAIHKKGFLDWFNEEKADIVNLQETKAKIEQLPKKLINVPGYTSYF 60 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 + + Y+GVA + +P E++ + + D++ R I F + N+Y P+G Sbjct: 61 HSAERGGYSGVATYTSIEPNEVINGMGIEKFDIEGRLIRLDFD----DFTLLNIYYPNGG 116 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + K+ + FL +A+ + + L+ GD N + D P E+ + F Sbjct: 117 -RDEERLQYKLDFYDAFLDYANDLRDQGKNLVICGDLNTAHKEIDLARPKQNEDVSGFLP 175 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHL-YSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 R+ K + G+ D R H+ Y++W Y + +N G R+D+ ++ E + Sbjct: 176 IEREWVSKFLDNGYVDTFRMLHENEKEKYTWWSYRTRARERNVGWRLDYFFVNEEFKDNV 235 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263 ++ I ++ G SDH P+ + ++I Sbjct: 236 RASYIISEVMG----SDHCPIALEIEI 258 >gi|260655439|ref|ZP_05860927.1| exodeoxyribonuclease III [Jonquetella anthropi E3_33 E1] gi|260629887|gb|EEX48081.1| exodeoxyribonuclease III [Jonquetella anthropi E3_33 E1] Length = 259 Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats. Identities = 83/262 (31%), Positives = 123/262 (46%), Gaps = 7/262 (2%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 V T+NVNS+R+R+ L W+ D++C+QETK D FP ++++ YH GQ Sbjct: 2 TFRVGTFNVNSLRSRLPVLERWLPTAGVDVLCVQETKVTDDQFPVAEVEAMGYHAVFAGQ 61 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 KSYNGVA+LS+ P E V+ + + L I N Y+P G I Sbjct: 62 KSYNGVAVLSRRAPDESVSGFNDSQ---EPNADSRLLAVRFGDLWIFNSYVPQGKAIDHP 118 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 Y K ++ R + RL + + P + D ++ + Sbjct: 119 DYQYKKEFLSRLSGLVAARLPGNVLWVGDLNVAPTPLDVTN---PTNKKDHVCFIQELRD 175 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYY-ADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 L+ D +R HD LYSF+DY ++ +N G RIDH++ SP L + I Sbjct: 176 LYALKTSALVDLLRRFHDGEELYSFFDYRVKNALERNIGWRIDHMLASPALAGLCRNCWI 235 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 D +PRGW KPSDHTP++ D+ Sbjct: 236 DKEPRGWEKPSDHTPMLADFDL 257 >gi|170750144|ref|YP_001756404.1| exodeoxyribonuclease III Xth [Methylobacterium radiotolerans JCM 2831] gi|170656666|gb|ACB25721.1| exodeoxyribonuclease III Xth [Methylobacterium radiotolerans JCM 2831] Length = 269 Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats. Identities = 78/267 (29%), Positives = 122/267 (45%), Gaps = 7/267 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62 +TV TWN+NS+R RI + ++ E+ PD++CLQETK D FP + L+ Y H+ GQ Sbjct: 3 LTVTTWNINSVRLRIDLVLRFLAEHKPDVLCLQETKCPDDAFPLKALRGSGYEHVMFAGQ 62 Query: 63 KSYNGVAILSKYQ-PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 K YNGVAILS++ V + + + + Y+P G + Sbjct: 63 KGYNGVAILSRFPLHTRSVMGFCERQDARHISAVLGPEAGAASGIVLHDFYVPAGGDVPD 122 Query: 122 TKYDDKISWIKRFLRFASQR--LELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-E 178 + K + FL + P I GD N+ P HD ++ + T E Sbjct: 123 RDLNPKFAHKLDFLSELRAWGGKRVSGPAILVGDLNVAPLEHDVWSHKQLLDVVSHTPLE 182 Query: 179 VRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLL 236 G+ DA R +Y++W Y + W + NKG R+DH +SP+ + Sbjct: 183 TEALEVLRGEAGWIDAARHLTPEPEKIYTWWSYRSPDWSAANKGRRLDHAWVSPDLAGTV 242 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263 + + R W +PSDH PV ++L++ Sbjct: 243 RKVEVLREARAWERPSDHAPVTLTLEL 269 >gi|27379180|ref|NP_770709.1| exodeoxyribonuclease III [Bradyrhizobium japonicum USDA 110] gi|27352331|dbj|BAC49334.1| exodeoxyribonuclease III [Bradyrhizobium japonicum USDA 110] Length = 256 Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats. Identities = 88/258 (34%), Positives = 134/258 (51%), Gaps = 3/258 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+N+N+I R+ NL AW++ PD++ LQE K D FP ++ Y GQK Sbjct: 1 MKIATFNINNINRRLPNLLAWMRAAKPDVVALQELKASDGEFPAAAIEKAGYGAVWRGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 ++NGVAIL++ + + + + ++YLP+GNP K Sbjct: 61 TWNGVAILARDAEPILTRDRL---PGGSDDHEARYIEAAVRGIIVTSIYLPNGNPQPGPK 117 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 +D K+ W R R A ++ + P++ AGDYN+ P D Y W+ DA + R +F Sbjct: 118 FDYKLDWFARLKRHAKTFIKQDLPVVLAGDYNVAPTAIDIYPTRSWDKDALIQPKSRAAF 177 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 L G+ DAIR H +Y+FWDY + W ++ G+R+DH++LSP S L A +D Sbjct: 178 ASLVAQGWGDAIRELHPDKRIYTFWDYKRNRWPRDAGLRLDHLLLSPALISRLAKAGVDK 237 Query: 244 KPRGWTKPSDHTPVIVSL 261 K RG SDH P + L Sbjct: 238 KVRGEDGASDHAPAWIVL 255 >gi|150005146|ref|YP_001299890.1| exodeoxyribonuclease [Bacteroides vulgatus ATCC 8482] gi|254883281|ref|ZP_05255991.1| exodeoxyribonuclease [Bacteroides sp. 4_3_47FAA] gi|294778957|ref|ZP_06744373.1| exodeoxyribonuclease III [Bacteroides vulgatus PC510] gi|319642656|ref|ZP_07997302.1| exodeoxyribonuclease [Bacteroides sp. 3_1_40A] gi|149933570|gb|ABR40268.1| exodeoxyribonuclease [Bacteroides vulgatus ATCC 8482] gi|254836074|gb|EET16383.1| exodeoxyribonuclease [Bacteroides sp. 4_3_47FAA] gi|294447266|gb|EFG15850.1| exodeoxyribonuclease III [Bacteroides vulgatus PC510] gi|317385744|gb|EFV66677.1| exodeoxyribonuclease [Bacteroides sp. 3_1_40A] Length = 252 Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats. Identities = 69/263 (26%), Positives = 108/263 (41%), Gaps = 13/263 (4%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ +WNVN +RA D CLQETK ++ + + + + Sbjct: 1 MLKFISWNVNGLRACYDKGFVDVFHRLEADFFCLQETKMQEGQLDAK-FEGYHSYWNYAE 59 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G AI SK +P+ + L ++ D + R I + Sbjct: 60 KKGYSGTAIFSKVKPLSVTYGLGIEEHDHEGRVITLELESFYLITVYTPNSQEELRRLDY 119 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + R ++LE ++P+I GD N+ + D NP +A FT E R Sbjct: 120 RM------KWEDDFRAYLKKLEEKKPVIVCGDLNVAHKEIDLKNPKTNRKNAGFTDEERA 173 Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 F L GFTD R + +YS+W Y + KN G RID+ + S L A Sbjct: 174 KFTTLLESGFTDTFRYFYPEQEGIYSWWSYRFKAREKNSGWRIDYFLTSDSLKDRLKGAH 233 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263 I T G SDH PV +++++ Sbjct: 234 IYTDIFG----SDHCPVELTIEL 252 >gi|290789946|pdb|3G00|A Chain A, Mth0212 In Complex With A 9bp Blunt End Dsdna At 1.7 Angstrom gi|290789947|pdb|3G00|B Chain B, Mth0212 In Complex With A 9bp Blunt End Dsdna At 1.7 Angstrom gi|290789951|pdb|3G0R|A Chain A, Complex Of Mth0212 And An 8bp Dsdna With Distorted Ends gi|290789952|pdb|3G0R|B Chain B, Complex Of Mth0212 And An 8bp Dsdna With Distorted Ends gi|290789960|pdb|3G2D|A Chain A, Complex Of Mth0212 And A 4 Bp Dsdna With 3'-Overhang gi|290789961|pdb|3G2D|B Chain B, Complex Of Mth0212 And A 4 Bp Dsdna With 3'-Overhang gi|290789966|pdb|3G38|A Chain A, The Catalytically Inactive Mutant Mth0212 (D151n) In Complex With An 8 Bp Dsdna gi|290789983|pdb|3G8V|A Chain A, The Rationally Designed Catalytically Inactive Mutant Mth0212(D151n) gi|290789985|pdb|3GA6|A Chain A, Mth0212 In Complex With Two Dna Helices gi|290789986|pdb|3GA6|B Chain B, Mth0212 In Complex With Two Dna Helices Length = 265 Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats. Identities = 64/260 (24%), Positives = 106/260 (40%), Gaps = 12/260 (4%) Query: 1 MSVVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 M+V+ + +WNVN +RA W E PDI+CLQE K + P + Y Sbjct: 1 MAVLKIISWNVNGLRAVHRKGFLKWFMEEKPDILCLQEIKAAPEQLPRKLRHVEGYRSFF 60 Query: 60 CG--QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 +K Y+GVA+ +K P + + D + R A F + N+Y P+G Sbjct: 61 TPAERKGYSGVAMYTKVPPSSLREGFGVERFDTEGRIQIADFD----DFLLYNIYFPNGK 116 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 K+ + FL ++ + +I G++N + D P N + F Sbjct: 117 MSEER-LKYKLEFYDAFLEDVNRERDSGRNVIICGNFNTAHREIDLARPKENSNVSGFLP 175 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 R K G+ D R + Y++W Y + +N G R+D+ ++ E + Sbjct: 176 VERAWIDKFIENGYVDTFRMFNSDPGQYTWWSYRTRARERNVGWRLDYFFVNEEFKGKVK 235 Query: 238 SARIDTKPRGWTKPSDHTPV 257 + I + G SDH P+ Sbjct: 236 RSWILSDVMG----SDHCPI 251 >gi|302876908|ref|YP_003845541.1| exodeoxyribonuclease III Xth [Clostridium cellulovorans 743B] gi|307687596|ref|ZP_07630042.1| exodeoxyribonuclease III Xth [Clostridium cellulovorans 743B] gi|302579765|gb|ADL53777.1| exodeoxyribonuclease III Xth [Clostridium cellulovorans 743B] Length = 253 Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats. Identities = 71/261 (27%), Positives = 117/261 (44%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN IRA + + K + DI CLQETK + + L+ + + Sbjct: 1 MKLISWNVNGIRACVEKGFLDFFKSVDADIFCLQETKLQQGQIDLD-LEGYEQYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G A+ +K +P+ L ++ D + R I + + +Y P+ + Sbjct: 60 KGYSGTAVFTKEKPLSASYGLNIEEHDKEGRVITLEYD----DFYLVTVYTPNSKEELAR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + R ++LE +P+I GD N+ + D NP + F+ E R Sbjct: 116 L--EYRMEWEDAFRAYLKKLEKNKPVIVCGDLNVAHKEIDLKNPKTNRKNPGFSDEERAK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L GF D R + YS+W Y ++ +KN G RID+ ++S E L SA I Sbjct: 174 FSELLASGFIDTYRYFYPDKEGAYSWWSYRFNARTKNAGWRIDYFVISEELKDKLVSAEI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 + G SDH PV + + Sbjct: 234 HNEILG----SDHCPVELVIK 250 >gi|239947023|ref|ZP_04698776.1| exodeoxyribonuclease III [Rickettsia endosymbiont of Ixodes scapularis] gi|239921299|gb|EER21323.1| exodeoxyribonuclease III [Rickettsia endosymbiont of Ixodes scapularis] Length = 262 Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats. Identities = 97/259 (37%), Positives = 145/259 (55%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + TWN+NSI+ R++ L ++ + NPDI+ LQE K E + FPF+ L +L Y+ GQK Sbjct: 1 MKIVTWNINSIKTRLNLLRNFLSKENPDILLLQEIKCETEKFPFDELSNLPYNFYVHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 SYNGVAI+SK+ EI+ P + QARF+E ++ I +LY P+G+ I S K Sbjct: 61 SYNGVAIISKFPADEIIKDFPNNYYSDQARFLEIKLSLPIGFCNIISLYAPNGSFIGSDK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+++ F+ + S + +E I GD+NI P D Y+P + CFT ++ Sbjct: 121 FVAKLAFYDNFINYLSTKKSFDEKTIIGGDFNIAPFDIDVYSPKLLAETTCFTEIEQKKL 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + + N GF D R H + +S+WDY A + +NKG+RID I+ L + +D Sbjct: 181 RTILNSGFEDLYRLMHPSKQEFSWWDYRAGCFEQNKGMRIDMILGCNNTIDYLENCYMDY 240 Query: 244 KPRGWTKPSDHTPVIVSLD 262 R KPSDH PVI S Sbjct: 241 NLRTQEKPSDHIPVIASFK 259 >gi|53802367|ref|YP_112853.1| exodeoxyribonuclease III [Methylococcus capsulatus str. Bath] gi|53756128|gb|AAU90419.1| exodeoxyribonuclease III [Methylococcus capsulatus str. Bath] Length = 257 Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats. Identities = 82/264 (31%), Positives = 129/264 (48%), Gaps = 13/264 (4%) Query: 4 VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET--C 60 + + T NVN IR A W+ + N DI+CLQE K + E +Y Sbjct: 1 MRIITLNVNGIRSAARKGFFDWLPKQNADIVCLQEIKAQTTQLNDELFWPESYACYYLEA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GVA+ ++ +P +++ L DD+D +AR++EA F L + +LY+P G+ Sbjct: 61 EKKGYSGVALYARKEPDDVIQGLGWDDMDTEARYLEARFG----ELSVVSLYIPSGSSSE 116 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 K ++ RFL F IF GD+NI +P D N + ++ F E R Sbjct: 117 QR-QAVKFGFLDRFLPFLDDCARSGRQYIFCGDWNIAHKPIDLKNWRSNQKNSGFLPEER 175 Query: 181 QS-FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + + G+ DA RA + Y++W +W+KN G RID+ ++SP L+ SA Sbjct: 176 AWLDRVFEEAGWVDAFRAVNPEPEQYTWWSNRGQAWAKNVGWRIDYQVVSPGLRELIRSA 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 I + R SDH P+I+ D+ Sbjct: 236 AIYKEER----FSDHAPLIIDYDL 255 >gi|217035255|pdb|2VOA|A Chain A, Structure Of An Ap Endonuclease From Archaeoglobus Fulgidus gi|217035256|pdb|2VOA|B Chain B, Structure Of An Ap Endonuclease From Archaeoglobus Fulgidus Length = 257 Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats. Identities = 85/262 (32%), Positives = 138/262 (52%), Gaps = 6/262 (2%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 ++ +AT+NVNSIR+R+H + W+KEN PDI+C+QETK E++ FP + YH+ G Sbjct: 1 MLKIATFNVNSIRSRLHIVIPWLKENKPDILCMQETKVENRKFPEADFHRIGYHVVFSGS 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K NGVAI S +P ++ L + D + + N Y+P G I S Sbjct: 61 KGRNGVAIASLEEPEDVSFGLDSEPKDEDRLIRA-----KIAGIDVINTYVPQGFKIDSE 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 KY K+ W++R + + ++ ++ GD N+ P+P D ++P +N F + R++ Sbjct: 116 KYQYKLQWLERLYHYLQKTVDFRSFAVWCGDMNVAPEPIDVHSPDKLKNHVXFHEDARRA 175 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYY-ADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 ++K+ +GF D +R H +Y+F+DY + + G R D I+ +P Sbjct: 176 YKKILELGFVDVLRKIHPNERIYTFYDYRVKGAIERGLGWRGDAILATPPLAERCVDCYA 235 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 D KPR KPSDH P++ D+ Sbjct: 236 DIKPRLAEKPSDHLPLVAVFDV 257 >gi|71065757|ref|YP_264484.1| exonuclease III [Psychrobacter arcticus 273-4] gi|71038742|gb|AAZ19050.1| Exodeoxyribonuclease III [Psychrobacter arcticus 273-4] Length = 274 Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats. Identities = 85/271 (31%), Positives = 132/271 (48%), Gaps = 10/271 (3%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +N+N IRAR H L A +PD++ LQETK D+ FP E ++ L YH+E GQ Sbjct: 1 MTRFVCFNINGIRARQHQLEAVRDIIDPDVMGLQETKVHDEQFPLENVEGLGYHVEYFGQ 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K++ GVAILSK PI + PG+D + Q RFI A + + + + + N Y P G Sbjct: 61 KAHYGVAILSKVAPIFVQKGFPGEDAEAQKRFIHARYEFDGREIDVLNGYFPQGESQEHP 120 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175 K+ K ++ + + L+ GD NI P+ D + F Sbjct: 121 TKFPMKRAYYADLMAYIDILKAEGRSLVVMGDMNIAPEDIDIGIGEVNAKRWLKNRKTSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHL-YSFWDYYADSWSKN--KGIRIDHIMLSPEA 232 E R+ + L + TD R + YS++DY + + + +G+RIDHI+ +P+ Sbjct: 181 LPEEREWYSALMSRELTDTYRLHYPESTELYSWFDYRSRGFDDDPKRGLRIDHILCTPDL 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + A I + R KPSDH P+ + D+ Sbjct: 241 VAHCVDAGISYELRAMEKPSDHAPIWTAFDL 271 >gi|310779700|ref|YP_003968032.1| exodeoxyribonuclease III Xth [Ilyobacter polytropus DSM 2926] gi|309749023|gb|ADO83684.1| exodeoxyribonuclease III Xth [Ilyobacter polytropus DSM 2926] Length = 253 Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats. Identities = 70/263 (26%), Positives = 113/263 (42%), Gaps = 14/263 (5%) Query: 4 VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IET 59 + + +WNVN IRA ++ +PDI+CLQETK ++ + Y+ E+ Sbjct: 1 MKILSWNVNGIRAVEKKGAFQDVFEKLDPDILCLQETKASEEQLTDNIKKIPGYYSFFES 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GVA+ SK +P+ I D + + N Y P+ Sbjct: 61 AVKKGYSGVALYSKTKPLSIKNMGIDIFDDEGRYIEA-----KFENFTLINCYFPNSQEK 115 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K+++ L + + +E E ++ GDYNI Q D NP + F E Sbjct: 116 GKR-LEYKLNFCSDLLDYCNSLVENGENIVLCGDYNIAHQEIDLKNPKSNTKNPGFLPEE 174 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R+ K N G+ D R + Y++W Y + KN G RID+ ++ + S + Sbjct: 175 REWMSKFLNSGYIDIFRYLYPNEIKYTWWSYRFKAREKNIGWRIDYHCVNKDFISTIKKV 234 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 I G SDH PV++ L Sbjct: 235 EILDNITG----SDHCPVLIELK 253 >gi|256854033|ref|ZP_05559398.1| exodeoxyribonuclease [Enterococcus faecalis T8] gi|307290261|ref|ZP_07570177.1| exodeoxyribonuclease III [Enterococcus faecalis TX0411] gi|256710976|gb|EEU26019.1| exodeoxyribonuclease [Enterococcus faecalis T8] gi|306498682|gb|EFM68183.1| exodeoxyribonuclease III [Enterococcus faecalis TX0411] gi|315030444|gb|EFT42376.1| exodeoxyribonuclease III [Enterococcus faecalis TX4000] Length = 251 Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats. Identities = 76/261 (29%), Positives = 115/261 (44%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + N E + D CLQETK + E L + + + Sbjct: 1 MKCISWNVNGLRAVVKKNFMDVFNELDADFFCLQETKLQAGQIDLE-LPGYHQYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K + + + L + D + R I + + Sbjct: 60 KGYSGTAIFAKEEALSVRYGLGIETHDQEGRVITLEYPEF-----FMVTCYTPNSQAELK 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + +++W F + L E+P+I GD N+ Q D N + +A FT E RQ Sbjct: 115 RLAYRMTWEDAFRAY-LNELNQEKPVILCGDLNVAHQNIDLKNWKTNQKNAGFTPEERQK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L + GFTD R + +YS+W Y ++ N G RID+ ++S L SA+I Sbjct: 174 FTELLDSGFTDTFRYFYPEAEGIYSWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 T G SDH PV V LD Sbjct: 234 HTDILG----SDHCPVEVVLD 250 >gi|298206939|ref|YP_003715118.1| exodeoxyribonuclease [Croceibacter atlanticus HTCC2559] gi|83849573|gb|EAP87441.1| exodeoxyribonuclease [Croceibacter atlanticus HTCC2559] Length = 254 Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats. Identities = 76/264 (28%), Positives = 132/264 (50%), Gaps = 14/264 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY---HIET 59 + + ++NVN IRA + +L +W+ + + D++CLQE K F + Y + Sbjct: 1 MKIVSYNVNGIRAAMRKDLISWLSQTDADVVCLQEIKANPDQFDETEFHDIGYKYCYWYP 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GVA+L K +P + +D + R I A F + + ++YLP G Sbjct: 61 AQKKGYSGVALLCKTKPNHVEYGTGIATMDFEGRNIRADF----NDVSVMSMYLPSG--T 114 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 S + D K++++ FL ++ L+ GDYNI +P D ++P+ +N + F Sbjct: 115 NSARLDFKLNYMDEFLEYSKNLRHSIPNLVVCGDYNICHKPEDIHDPVRLKNVSGFLPVE 174 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R K + GF D+ R +D Y++W Y A++ + NKG R+D++M++P L + Sbjct: 175 RDWLTKFIDSGFIDSFRVFNDQPENYTWWSYRANARANNKGWRLDYLMVTPPLQEKLKRS 234 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 I SDH PV++ LD+ Sbjct: 235 VILKDA----VHSDHCPVLLELDL 254 >gi|331006597|ref|ZP_08329884.1| Exodeoxyribonuclease III [gamma proteobacterium IMCC1989] gi|330419581|gb|EGG93960.1| Exodeoxyribonuclease III [gamma proteobacterium IMCC1989] Length = 272 Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats. Identities = 85/271 (31%), Positives = 133/271 (49%), Gaps = 11/271 (4%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 ++ ++NVNSIR RI L A I++++PD I LQETK D +FP + ++ + YH++ GQ Sbjct: 1 MIKAISFNVNSIRQRIPQLEALIEKHDPDFIGLQETKVTDVDFPVDVIEKMGYHVQFHGQ 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-TQTLRIGNLYLPHGNPITS 121 K++ GVA++SK+ + + DD + Q RFI F + + N Y P G Sbjct: 61 KTHYGVALMSKHPFLSVQKGYDTDDDEAQKRFISGRFVSPLGGEITVVNGYFPQGESQDH 120 Query: 122 T-KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDAC 174 K+ +K + + + + E+ LI GD NI P+ D + Sbjct: 121 PTKFANKKKYYEDLDSYLCRNHTPEDQLIVMGDMNISPEDQDIGIGEDNRKRWLKTGKCS 180 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLY-SFWDYYADSWSK--NKGIRIDHIMLSPE 231 F R+ KL N G TD R H T Y S++DY + + + +G+RID I+ + Sbjct: 181 FLPIEREWLAKLYNWGLTDTYRLLHPTGSDYFSWFDYRSRGFEREPKRGLRIDLILATES 240 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + + ID + RG KPSDH P+ D Sbjct: 241 LAKTVTESGIDYEIRGMEKPSDHCPIWTYFD 271 >gi|315162099|gb|EFU06116.1| exodeoxyribonuclease III [Enterococcus faecalis TX0645] Length = 251 Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats. Identities = 76/261 (29%), Positives = 114/261 (43%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + N E + D CLQETK + E L + + + Sbjct: 1 MKCISWNVNGLRAVVKKNFMDVFNELDADFFCLQETKLQAGQIDLE-LPGYHQYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K + + + L + D + R I + + Sbjct: 60 KGYSGTAIFAKEEALSVRYGLGIEAHDQEGRVITLEYPEF-----FMVTCYTPNSQAELK 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + +++W F + L E+P+I GD N+ Q D N + +A FT E RQ Sbjct: 115 RLAYRMTWEDAFRAY-LNELNQEKPVILCGDLNVAHQKIDLKNWKTNQKNAGFTPEERQK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F L + GFTD R + +YS+W Y ++ N G RID+ ++S L SA+I Sbjct: 174 FTGLLDSGFTDTFRYFYPEAEGIYSWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 T G SDH PV V LD Sbjct: 234 HTDILG----SDHCPVEVVLD 250 >gi|290789945|pdb|3FZI|A Chain A, 1.9 Angstrom Structure Of The Thermophilic Exonuclease Iii Homologue Mth0212 gi|290789950|pdb|3G0A|A Chain A, Mth0212 With Two Bound Manganese Ions gi|290789955|pdb|3G1K|A Chain A, Mth0212 (Wt) Crystallized In A Monoclinic Space Group gi|290789956|pdb|3G1K|B Chain B, Mth0212 (Wt) Crystallized In A Monoclinic Space Group gi|290789957|pdb|3G2C|A Chain A, Mth0212 In Complex With A Short Ssdna (Cgta) gi|290789958|pdb|3G2C|B Chain B, Mth0212 In Complex With A Short Ssdna (Cgta) gi|290789969|pdb|3G3C|A Chain A, Mth0212 (Wt) In Complex With A 6bp Dsdna Containing A Single One Nucleotide Long 3'-Overhang gi|290789970|pdb|3G3C|B Chain B, Mth0212 (Wt) In Complex With A 6bp Dsdna Containing A Single One Nucleotide Long 3'-Overhang gi|290789976|pdb|3G3Y|A Chain A, Mth0212 In Complex With Ssdna In Space Group P32 gi|290789977|pdb|3G3Y|B Chain B, Mth0212 In Complex With Ssdna In Space Group P32 gi|290789979|pdb|3G4T|A Chain A, Mth0212 (Wt) In Complex With A 7bp Dsdna gi|290789980|pdb|3G4T|B Chain B, Mth0212 (Wt) In Complex With A 7bp Dsdna Length = 265 Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats. Identities = 65/260 (25%), Positives = 106/260 (40%), Gaps = 12/260 (4%) Query: 1 MSVVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 M+V+ + +WNVN +RA W E PDI+CLQE K + P + Y Sbjct: 1 MAVLKIISWNVNGLRAVHRKGFLKWFMEEKPDILCLQEIKAAPEQLPRKLRHVEGYRSFF 60 Query: 60 CG--QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 +K Y+GVA+ +K P + + D + R A F + N+Y P+G Sbjct: 61 TPAERKGYSGVAMYTKVPPSSLREGFGVERFDTEGRIQIADFD----DFLLYNIYFPNGK 116 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 K+ + FL ++ + +I GD+N + D P N + F Sbjct: 117 MSEER-LKYKLEFYDAFLEDVNRERDSGRNVIICGDFNTAHREIDLARPKENSNVSGFLP 175 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 R K G+ D R + Y++W Y + +N G R+D+ ++ E + Sbjct: 176 VERAWIDKFIENGYVDTFRMFNSDPGQYTWWSYRTRARERNVGWRLDYFFVNEEFKGKVK 235 Query: 238 SARIDTKPRGWTKPSDHTPV 257 + I + G SDH P+ Sbjct: 236 RSWILSDVMG----SDHCPI 251 >gi|227494321|ref|ZP_03924637.1| exodeoxyribonuclease III; exonuclease III [Actinomyces coleocanis DSM 15436] gi|226832055|gb|EEH64438.1| exodeoxyribonuclease III; exonuclease III [Actinomyces coleocanis DSM 15436] Length = 255 Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats. Identities = 73/258 (28%), Positives = 122/258 (47%), Gaps = 5/258 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + TWNVNS+R RI + +K + D++ +QE K + + FPFE + Y +E G Sbjct: 1 MRLVTWNVNSVRTRIDRVIEVLKRWDVDVLAMQELKCKPEQFPFERFEEAGYQVEMVGLN 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVAI S+ + PG + + I +LY+P+G + Sbjct: 61 QWNGVAIASRVGIENVQVSFPG-QPEYDGVVEARALGAVCSGVEIWSLYVPNGRELDHPH 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W+ + + + + GD+N+ P HD ++ +E ++ R++F Sbjct: 120 YAYKLEWLTALRDYMVET-MHDRKVALVGDWNVAPFDHDVWDIKAFEGATHVSVPEREAF 178 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + +G T+ R + Y++WDY + KN+G+RID + SP T + +A ID Sbjct: 179 RAFAEIGMTEVTR---ERVDNYTYWDYQKLRFPKNEGMRIDFVYASPALTETVTAAHIDR 235 Query: 244 KPRGWTKPSDHTPVIVSL 261 R SDH PVIV Sbjct: 236 DERKGKGASDHVPVIVDF 253 >gi|225548156|ref|ZP_03769441.1| hypothetical protein RUMHYD_00135 [Blautia hydrogenotrophica DSM 10507] gi|225040687|gb|EEG50933.1| hypothetical protein RUMHYD_00135 [Blautia hydrogenotrophica DSM 10507] Length = 251 Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats. Identities = 70/262 (26%), Positives = 116/262 (44%), Gaps = 13/262 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN IRA + + +E N DI C+QETK ++ TL + + + + Sbjct: 1 MKFISWNVNGIRACLKKGFEEYFQEANADIFCIQETKCQEGQVEL-TLPGYHQYWNSAVR 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +P+ + + ++ D + R I + ++ Sbjct: 60 KGYSGTAIFAKREPLSVSYGIGIEEHDQEGRVITLEYEDFYFVTVYTPNSQNELARLSYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 +R +LE +P+++ GD N+ Q D NP +A FT E R Sbjct: 120 M------DWERDFLEYLTKLEERKPVVWCGDLNVAHQEIDLKNPKTNRKNAGFTDEERAC 173 Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F K+ GF D R + +YS+W Y + KN G RID+ ++S + A+I Sbjct: 174 FTKVLESGFIDTFRYFYPDQEGIYSWWSYRFRAREKNAGWRIDYFLVSSSLREKMVDAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 T+ G SDH PV + + + Sbjct: 234 HTQVLG----SDHCPVELDITL 251 >gi|134299043|ref|YP_001112539.1| exodeoxyribonuclease III [Desulfotomaculum reducens MI-1] gi|134051743|gb|ABO49714.1| Exodeoxyribonuclease III [Desulfotomaculum reducens MI-1] Length = 264 Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats. Identities = 91/264 (34%), Positives = 133/264 (50%), Gaps = 7/264 (2%) Query: 4 VT--VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + VA++NVNSIR+R L W+ N PD+ICLQETK D +FP + + +H G Sbjct: 1 MKFTVASFNVNSIRSRKELLLEWLLTNCPDVICLQETKVRDIDFPEDFFKEKGFHAIYKG 60 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 QKSYNGVAILS + + + L +AR + A+ + I N Y+P G + S Sbjct: 61 QKSYNGVAILSPHPITPLNSDLGDVAEPGEARLLAASVKG----IPIINTYIPQGQAVNS 116 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 K+ K+SWIK + + PL++ GD+N+ P+P D ++P F E Sbjct: 117 PKFSYKLSWIKSMRDYFNTNYLSTLPLLWMGDFNVAPEPKDVHDPKRLYGKVGFHPEEHL 176 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYY-ADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + Q ++ GF D R ++FWDY +N G RIDHI + A Sbjct: 177 ALQYVKEWGFQDVFRMHEPEAGHFTFWDYRIPKGVERNLGWRIDHIWATESLAKRSTRAW 236 Query: 241 IDTKPRGWTKPSDHTPVIVSLDIP 264 ID +PR KPSDHT ++ ++ Sbjct: 237 IDMEPRRREKPSDHTLILAEFELS 260 >gi|328541797|ref|YP_004301906.1| Exodeoxyribonuclease III [Polymorphum gilvum SL003B-26A1] gi|326411549|gb|ADZ68612.1| Exodeoxyribonuclease III [Polymorphum gilvum SL003B-26A1] Length = 269 Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats. Identities = 85/266 (31%), Positives = 119/266 (44%), Gaps = 9/266 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62 +T+ATWN+NS+R R+ + +I E PD++CLQETK D NFP + L Y HI GQ Sbjct: 5 LTIATWNINSVRLRLPIVEKFILEQAPDVLCLQETKCPDANFPEAAFRKLGYPHIAINGQ 64 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+GVA +S+ I G AR I + LR+ N Y+P G Sbjct: 65 KGYHGVATISRRPLANIEKR--GFCDKGDARHIAVDVAFSDSPLRVHNFYVPAGGDEPDA 122 Query: 123 KYDDKISWIKRFLRFASQRLE---LEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K F+ L E P + GD N+ P HD ++ T Sbjct: 123 AINPKFGHKLDFMAEMKAWLNGAETERPAVLVGDLNVAPYEHDVWSHKALLKIVSHTPVE 182 Query: 180 RQS--FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLL 236 + + R LY++W Y A W + +KG R+DH+ +SP L Sbjct: 183 TELLEAIRSHGGWIDAMRRFVPMEEKLYTWWSYRARDWAAADKGRRLDHVWVSPPLADRL 242 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLD 262 + R+ RGW KPSDH PVI + Sbjct: 243 KAMRVLRAARGWDKPSDHAPVIAVFE 268 >gi|153937900|ref|YP_001390827.1| exodeoxyribonuclease III [Clostridium botulinum F str. Langeland] gi|168180137|ref|ZP_02614801.1| exodeoxyribonuclease III [Clostridium botulinum NCTC 2916] gi|170757676|ref|YP_001781117.1| exodeoxyribonuclease III [Clostridium botulinum B1 str. Okra] gi|226948816|ref|YP_002803907.1| exodeoxyribonuclease III [Clostridium botulinum A2 str. Kyoto] gi|152933796|gb|ABS39294.1| exodeoxyribonuclease III [Clostridium botulinum F str. Langeland] gi|169122888|gb|ACA46724.1| exodeoxyribonuclease III [Clostridium botulinum B1 str. Okra] gi|182668909|gb|EDT80885.1| exodeoxyribonuclease III [Clostridium botulinum NCTC 2916] gi|226843845|gb|ACO86511.1| exodeoxyribonuclease III [Clostridium botulinum A2 str. Kyoto] gi|295318896|gb|ADF99273.1| exodeoxyribonuclease III [Clostridium botulinum F str. 230613] gi|322805797|emb|CBZ03362.1| exodeoxyribonuclease III [Clostridium botulinum H04402 065] Length = 253 Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats. Identities = 69/262 (26%), Positives = 114/262 (43%), Gaps = 12/262 (4%) Query: 4 VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + +WNVN +RA N WI E +PDI+C+QETK + Y+ Sbjct: 1 MRIYSWNVNGLRAVAKKNFIEWIGEESPDILCIQETKLQGNQLEDNIKNIDGYYSYFSFA 60 Query: 62 -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GVA +K +PI + + + D + R + F + N+Y P+G Sbjct: 61 VKKGYSGVATYTKVKPISVKHSIGIEKFDSEGRILITEFK----DFTLLNIYFPNGQ-RD 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K+ + + + + ++ + L+ GDYN D NP E + F R Sbjct: 116 EERLQYKLDFYEALFNYCDELVKEGKKLVICGDYNTAHNEIDLKNPKANEKTSGFLRIER 175 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 K+ G+TD R + YS+W Y + +N G RID+ +S + + Sbjct: 176 DWLDKIIERGYTDTFRNMNPDKIKYSWWSYRFKARERNAGWRIDYHFVSNNLLDRVENTE 235 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I + G SDH PV++ L Sbjct: 236 ILNEVYG----SDHCPVMLELK 253 >gi|85858539|ref|YP_460741.1| exodeoxyribonuclease III [Syntrophus aciditrophicus SB] gi|85721630|gb|ABC76573.1| exodeoxyribonuclease III [Syntrophus aciditrophicus SB] Length = 267 Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats. Identities = 89/265 (33%), Positives = 135/265 (50%), Gaps = 5/265 (1%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 M+ +AT+NVNSIR+R+H + +W++EN PD+ C+QETK D FP + YH+ Sbjct: 6 MARFKIATYNVNSIRSRLHIILSWLEENRPDVFCMQETKVADARFPADAFTVAGYHVVFR 65 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 G K YNGVAI S +P + L G+ D + + + N Y+P G Sbjct: 66 GMKQYNGVAIASLEKPENVTYGLGGEADDADEDRLI---AAVYSGVPVINTYVPQGRNRE 122 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + ++ K+ W RF + Q+ + PL++ GD N+ P+ D ++P CF EV Sbjct: 123 NPQFAYKLQWYARFREYLVQKWSSDAPLVWCGDLNVAPEQIDVHDPKRLLGHVCFNPEVW 182 Query: 181 QSFQKLQNMGFTDAIRATHDTH-HLYSFWDYY-ADSWSKNKGIRIDHIMLSPEATSLLHS 238 +F ++++ G D R H Y+F+DY S + G RIDHI+ +P + S Sbjct: 183 DAFDRVKSWGLEDLFRKHHPGEVECYTFFDYRVPRSVERKLGWRIDHILSTPALAAHCDS 242 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263 ID PR KPSDHT ++ I Sbjct: 243 CNIDMNPRMAEKPSDHTILVAEFTI 267 >gi|229549148|ref|ZP_04437873.1| exodeoxyribonuclease [Enterococcus faecalis ATCC 29200] gi|256957962|ref|ZP_05562133.1| exonuclease III [Enterococcus faecalis DS5] gi|257084299|ref|ZP_05578660.1| exonuclease III [Enterococcus faecalis Fly1] gi|257090921|ref|ZP_05585282.1| exonuclease III [Enterococcus faecalis CH188] gi|307276972|ref|ZP_07558082.1| exodeoxyribonuclease III [Enterococcus faecalis TX2134] gi|312902560|ref|ZP_07761766.1| exodeoxyribonuclease III [Enterococcus faecalis TX0635] gi|312951910|ref|ZP_07770798.1| exodeoxyribonuclease III [Enterococcus faecalis TX0102] gi|229305702|gb|EEN71698.1| exodeoxyribonuclease [Enterococcus faecalis ATCC 29200] gi|256948458|gb|EEU65090.1| exonuclease III [Enterococcus faecalis DS5] gi|256992329|gb|EEU79631.1| exonuclease III [Enterococcus faecalis Fly1] gi|256999733|gb|EEU86253.1| exonuclease III [Enterococcus faecalis CH188] gi|306506395|gb|EFM75555.1| exodeoxyribonuclease III [Enterococcus faecalis TX2134] gi|310630099|gb|EFQ13382.1| exodeoxyribonuclease III [Enterococcus faecalis TX0102] gi|310634230|gb|EFQ17513.1| exodeoxyribonuclease III [Enterococcus faecalis TX0635] gi|315035107|gb|EFT47039.1| exodeoxyribonuclease III [Enterococcus faecalis TX0027] gi|315154300|gb|EFT98316.1| exodeoxyribonuclease III [Enterococcus faecalis TX0031] gi|315159607|gb|EFU03624.1| exodeoxyribonuclease III [Enterococcus faecalis TX0312] gi|315579630|gb|EFU91821.1| exodeoxyribonuclease III [Enterococcus faecalis TX0630] gi|323481658|gb|ADX81097.1| exodeoxyribonuclease III [Enterococcus faecalis 62] Length = 251 Score = 189 bits (480), Expect = 4e-46, Method: Composition-based stats. Identities = 76/261 (29%), Positives = 115/261 (44%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + N E + D CLQETK + E L + + + Sbjct: 1 MKCISWNVNGLRAVVKKNFMDVFNELDADFFCLQETKLQAGQIDLE-LPGYHQYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K + + + L + D + R I + + Sbjct: 60 KGYSGTAIFAKEEALSVRYGLGIEAHDQEGRVITLEYPEF-----FMVTCYTPNSQAELK 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + +++W F + L E+P+I GD N+ Q D N + +A FT E RQ Sbjct: 115 RLAYRMTWEDAFRAY-LNELNQEKPVILCGDLNVAHQNIDLKNWKTNQKNAGFTPEERQK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L + GFTD R + +YS+W Y ++ N G RID+ ++S L SA+I Sbjct: 174 FTELLDSGFTDTFRYFYPEAEGIYSWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 T G SDH PV V LD Sbjct: 234 HTDILG----SDHCPVEVVLD 250 >gi|315148697|gb|EFT92713.1| exodeoxyribonuclease III [Enterococcus faecalis TX4244] Length = 251 Score = 189 bits (479), Expect = 4e-46, Method: Composition-based stats. Identities = 76/261 (29%), Positives = 115/261 (44%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + N E + D CLQETK + E L + + + Sbjct: 1 MKCISWNVNGLRAVVKKNFMDVFNELDADFFCLQETKLQAGQIDLE-LPGYHQYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K + + + L + D + R I + + Sbjct: 60 KGYSGTAIFAKEEALSVRYGLGIESHDQEGRVITLEYPEF-----FMVTCYTPNSQAELK 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + +++W F + L E+P+I GD N+ Q D N + +A FT E RQ Sbjct: 115 RLAYRMTWEDAFRAY-LNELNQEKPVILCGDLNVAHQKIDLKNWKTNQKNAGFTPEERQK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L + GFTD R + +YS+W Y ++ N G RID+ ++S L SA+I Sbjct: 174 FTELLDSGFTDTFRYFYPEAEGIYSWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 T G SDH PV V LD Sbjct: 234 HTDILG----SDHCPVEVVLD 250 >gi|326390442|ref|ZP_08212000.1| exodeoxyribonuclease III Xth [Thermoanaerobacter ethanolicus JW 200] gi|325993560|gb|EGD51994.1| exodeoxyribonuclease III Xth [Thermoanaerobacter ethanolicus JW 200] Length = 257 Score = 189 bits (479), Expect = 4e-46, Method: Composition-based stats. Identities = 70/263 (26%), Positives = 113/263 (42%), Gaps = 14/263 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + +WNVN +RA + + K+ N DI C+QETK + E L Y+ Sbjct: 1 MKFVSWNVNGLRACLQKGFMDYFKKVNADIFCIQETKLQPHQTGLEELNLEGYYAFWNFA 60 Query: 62 -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K+Y+G A+ +KY+P+ + + D + R I + + + N Sbjct: 61 EKKAYSGTAVFTKYKPLSVNYGIGIPQHDNEGRVITLEYE------KFYLVNTYTPNSQR 114 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + R +L+ +P+I GD N+ + D NP +A FT E R Sbjct: 115 GLTRLSYRMEWEEDFRNYLLKLDSVKPIILCGDLNVAHKEIDIKNPSANRRNAGFTDEER 174 Query: 181 QSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + L N GF D R + Y++W Y ++ KN G RID+ ++S L A Sbjct: 175 EKMTMLLNSGFIDTFRYFYPHKKDAYTWWSYMRNAREKNIGWRIDYFIVSQRLKDYLIDA 234 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 I + G SDH PV++ +D Sbjct: 235 EIHSDVMG----SDHCPVVLEID 253 >gi|229544881|ref|ZP_04433606.1| exodeoxyribonuclease [Enterococcus faecalis TX1322] gi|256963841|ref|ZP_05568012.1| exonuclease III [Enterococcus faecalis HIP11704] gi|257081702|ref|ZP_05576063.1| exonuclease III [Enterococcus faecalis E1Sol] gi|257087702|ref|ZP_05582063.1| exonuclease III [Enterococcus faecalis D6] gi|257416904|ref|ZP_05593898.1| exonuclease III [Enterococcus faecalis AR01/DG] gi|257421653|ref|ZP_05598643.1| exodeoxyribonuclease [Enterococcus faecalis X98] gi|307271787|ref|ZP_07553058.1| exodeoxyribonuclease III [Enterococcus faecalis TX0855] gi|307278718|ref|ZP_07559785.1| exodeoxyribonuclease III [Enterococcus faecalis TX0860] gi|307288645|ref|ZP_07568626.1| exodeoxyribonuclease III [Enterococcus faecalis TX0109] gi|229309982|gb|EEN75969.1| exodeoxyribonuclease [Enterococcus faecalis TX1322] gi|256954337|gb|EEU70969.1| exonuclease III [Enterococcus faecalis HIP11704] gi|256989732|gb|EEU77034.1| exonuclease III [Enterococcus faecalis E1Sol] gi|256995732|gb|EEU83034.1| exonuclease III [Enterococcus faecalis D6] gi|257158732|gb|EEU88692.1| exonuclease III [Enterococcus faecalis ARO1/DG] gi|257163477|gb|EEU93437.1| exodeoxyribonuclease [Enterococcus faecalis X98] gi|295113675|emb|CBL32312.1| exodeoxyribonuclease III [Enterococcus sp. 7L76] gi|306500399|gb|EFM69735.1| exodeoxyribonuclease III [Enterococcus faecalis TX0109] gi|306504579|gb|EFM73782.1| exodeoxyribonuclease III [Enterococcus faecalis TX0860] gi|306511665|gb|EFM80664.1| exodeoxyribonuclease III [Enterococcus faecalis TX0855] gi|315025498|gb|EFT37430.1| exodeoxyribonuclease III [Enterococcus faecalis TX2137] gi|315032586|gb|EFT44518.1| exodeoxyribonuclease III [Enterococcus faecalis TX0017] gi|315143871|gb|EFT87887.1| exodeoxyribonuclease III [Enterococcus faecalis TX2141] gi|315155597|gb|EFT99613.1| exodeoxyribonuclease III [Enterococcus faecalis TX0043] gi|315165304|gb|EFU09321.1| exodeoxyribonuclease III [Enterococcus faecalis TX1302] gi|315168718|gb|EFU12735.1| exodeoxyribonuclease III [Enterococcus faecalis TX1341] gi|327535952|gb|AEA94786.1| exodeoxyribonuclease III [Enterococcus faecalis OG1RF] Length = 251 Score = 189 bits (479), Expect = 4e-46, Method: Composition-based stats. Identities = 76/261 (29%), Positives = 115/261 (44%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + N E + D CLQETK + E L + + + Sbjct: 1 MKCISWNVNGLRAVVKKNFMDVFNELDADFFCLQETKLQAGQIDLE-LPGYHQYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K + + + L + D + R I + + Sbjct: 60 KGYSGTAIFAKEEALSVRYGLGIEAHDQEGRVITLEYPEF-----FMVTCYTPNSQAELK 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + +++W F + L E+P+I GD N+ Q D N + +A FT E RQ Sbjct: 115 RLAYRMTWEDAFRAY-LNELNQEKPVILCGDLNVAHQKIDLKNWKTNQKNAGFTPEERQK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L + GFTD R + +YS+W Y ++ N G RID+ ++S L SA+I Sbjct: 174 FTELLDSGFTDTFRYFYPEAEGIYSWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 T G SDH PV V LD Sbjct: 234 HTDILG----SDHCPVEVVLD 250 >gi|58040181|ref|YP_192145.1| exodeoxyribonuclease III [Gluconobacter oxydans 621H] gi|58002595|gb|AAW61489.1| Exodeoxyribonuclease III [Gluconobacter oxydans 621H] Length = 275 Score = 189 bits (479), Expect = 4e-46, Method: Composition-based stats. Identities = 96/257 (37%), Positives = 134/257 (52%), Gaps = 7/257 (2%) Query: 5 TVATWNVNSIRARIHNLAAWIKEN-NPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 T A+WN+NSIRAR H++ W++ + D++CLQE K ED FP + GQK Sbjct: 24 TFASWNINSIRARAHHVQDWLERHPECDLLCLQEIKCEDSQFP-AVFAEAGLDVAISGQK 82 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVA++ + LP D + IGNLYLP+GN Sbjct: 83 AYNGVALIGRRPFTVTHHTLPAFDHPSARYIEAELDG-----ITIGNLYLPNGNSGGEDG 137 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+++ A L+ E+P F GD+N+ P D + +DA E R +F Sbjct: 138 YATKLAFFDALAARARVLLDAEKPFAFIGDFNVCPTDEDLAPGALSTDDALVRPETRAAF 197 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 ++L+ MG TDA+RA T Y+FWDY A ++ +N G+RIDH +LSP T L S ID Sbjct: 198 RRLEWMGLTDALRALQPTGRHYTFWDYQAAAFQRNSGLRIDHALLSPRLTERLKSFVIDR 257 Query: 244 KPRGWTKPSDHTPVIVS 260 R K SDH PV+V+ Sbjct: 258 DERAKEKASDHVPVLVT 274 >gi|15892951|ref|NP_360665.1| exodeoxyribonuclease III [Rickettsia conorii str. Malish 7] gi|15620145|gb|AAL03566.1| exodeoxyribonuclease III [Rickettsia conorii str. Malish 7] Length = 260 Score = 189 bits (479), Expect = 4e-46, Method: Composition-based stats. Identities = 97/259 (37%), Positives = 143/259 (55%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+NSI+ R++ L ++ + NPDI+ LQE K E FPF+ L L Y+ GQK Sbjct: 1 MKIATWNINSIKTRLNLLRNFLSKENPDILLLQEIKCETAKFPFDALSDLPYNSYVHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 SYNGVAI+SK+ EI+ P + QARF+E ++ I +LY P+G + S K Sbjct: 61 SYNGVAIISKFPADEIIKDFPNNYCSDQARFLEIKLSLPIGFCNIISLYAPNGAFVGSDK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+++ F+ + S + +E I GD+NI P D Y+P + CFT ++ Sbjct: 121 FVAKLAFYDNFINYLSTKKSFDEKTIIGGDFNIAPFDIDVYSPKLLAETTCFTEVEQKKL 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + + N GF D R H + +S+WDY A + +NKG+RID I+ L + +D Sbjct: 181 RTILNSGFEDLYRLMHPSKQEFSWWDYRAGCFEQNKGMRIDMILGCNNTIDYLENCYMDY 240 Query: 244 KPRGWTKPSDHTPVIVSLD 262 R KPSDH PVI S Sbjct: 241 NLRTQEKPSDHIPVIASFK 259 >gi|91974922|ref|YP_567581.1| exodeoxyribonuclease III [Rhodopseudomonas palustris BisB5] gi|91681378|gb|ABE37680.1| exodeoxyribonuclease III [Rhodopseudomonas palustris BisB5] Length = 352 Score = 189 bits (479), Expect = 4e-46, Method: Composition-based stats. Identities = 82/270 (30%), Positives = 133/270 (49%), Gaps = 10/270 (3%) Query: 4 VT--VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETC 60 + + TWN+NS+R RI +AA++KE PD++CLQETK D FP + + L Y HI Sbjct: 83 MRFTLTTWNINSVRLRIDLVAAFLKEQQPDVLCLQETKCPDDAFPLKRFKQLGYEHIALN 142 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG---- 116 GQK Y+GVA++SK + + D+LD + + N L + N Y+P G Sbjct: 143 GQKGYHGVAVISKIPFVARDIRIFCDNLDSRHISVSLGTGDNDPPLVLHNFYVPAGGDVA 202 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 +P + K+ K+S++ + I GD N+ P HD ++ T Sbjct: 203 DPELNPKFKHKLSFLDEMKACEPLHPSGDARHILVGDLNVAPHEHDVWSHKQLLKVVSHT 262 Query: 177 L-EVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWS-KNKGIRIDHIMLSPEAT 233 E + L+ + D R + +Y++W Y A W+ ++G R+DHI +S Sbjct: 263 PVECEKLLAVLRAGNWVDVARDRIPLSEKIYTWWSYRAADWTVGDRGRRLDHIWVSEALR 322 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + + +I R W +PSDH PV V++++ Sbjct: 323 TRVTDFKILRDARSWERPSDHVPVTVTMEL 352 >gi|210617713|ref|ZP_03291707.1| hypothetical protein CLONEX_03931 [Clostridium nexile DSM 1787] gi|210149155|gb|EEA80164.1| hypothetical protein CLONEX_03931 [Clostridium nexile DSM 1787] Length = 250 Score = 189 bits (479), Expect = 4e-46, Method: Composition-based stats. Identities = 69/261 (26%), Positives = 114/261 (43%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN IRA + + +E + DI C+QE+K + E L+ + + + Sbjct: 1 MKLISWNVNGIRACVQKGFLEFFQEADADIFCIQESKMQAGQLDLE-LEGYHQYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G A+ +K +P+ + + ++ D + R I F ++ Sbjct: 60 KGYSGTAVFTKKEPLSVQYGIGIEEHDKEGRVITLEFEEFYFVTVYTPNSQSELARLSYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + LE ++P+IFAGD N+ D NP +A FT E R Sbjct: 120 IQWETDFLAY------LKGLEQKKPVIFAGDLNVAYAEIDLKNPKTNRKNAGFTDEERAK 173 Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F ++ GF D R + +YS+W Y + +KN G RID+ +S L A+I Sbjct: 174 FGEVLKAGFIDTFRYFYPEMEGIYSWWSYRFSARAKNAGWRIDYFCVSESLKDRLADAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 T G SDH P+ + L Sbjct: 234 LTDVMG----SDHCPIELDLK 250 >gi|229587031|ref|YP_002845532.1| Exodeoxyribonuclease III [Rickettsia africae ESF-5] gi|228022081|gb|ACP53789.1| Exodeoxyribonuclease III [Rickettsia africae ESF-5] Length = 260 Score = 189 bits (479), Expect = 4e-46, Method: Composition-based stats. Identities = 96/259 (37%), Positives = 144/259 (55%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+NSI+ R++ L ++ + NPDI+ LQE K E FPF+ L L Y+ GQK Sbjct: 1 MKIATWNINSIKTRLNLLRNFLSKENPDILLLQEIKCETAKFPFDALSDLPYNSYVHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 SYNGVAI+SK+ EI+ P + QARF+E ++ I +LY P+G+ + S K Sbjct: 61 SYNGVAIISKFPADEIIKDFPNNYCSDQARFLEIKLSLPIGFCNIISLYAPNGSFVGSDK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+++ F+ + S + +E I GD+NI P D Y+P + CFT ++ Sbjct: 121 FVAKLAFYDNFINYLSTKKSFDEKTIIGGDFNIAPFDIDVYSPKLLTETTCFTEVEQKKL 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + + N GF D R H + +S+WDY A + +NKG+RID ++ L + +D Sbjct: 181 RTILNSGFEDLYRLMHPSKQEFSWWDYRAGCFEQNKGMRIDMVLGCNNTIDYLENCYMDY 240 Query: 244 KPRGWTKPSDHTPVIVSLD 262 R KPSDH PVI S Sbjct: 241 NLRTQEKPSDHIPVIASFK 259 >gi|290789984|pdb|3G91|A Chain A, 1.2 Angstrom Structure Of The Exonuclease Iii Homologue Mth0212 Length = 265 Score = 189 bits (479), Expect = 4e-46, Method: Composition-based stats. Identities = 65/260 (25%), Positives = 106/260 (40%), Gaps = 12/260 (4%) Query: 1 MSVVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 M+V+ + +WNVN +RA W E PDI+CLQE K + P + Y Sbjct: 1 MAVLKIISWNVNGLRAVHRKGFLKWFMEEKPDILCLQEIKAAPEQLPRKLRHVEGYRSFF 60 Query: 60 CG--QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 +K Y+GVA+ +K P + + D + R A F + N+Y P+G Sbjct: 61 TPAERKGYSGVAMYTKVPPSSLREGFGVERFDTEGRIQIADFD----DFLLYNIYFPNGA 116 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 K+ + FL ++ + +I GD+N + D P N + F Sbjct: 117 MSEER-LKYKLEFYDAFLEDVNRERDSGRNVIICGDFNTAHREIDLARPKENSNVSGFLP 175 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 R K G+ D R + Y++W Y + +N G R+D+ ++ E + Sbjct: 176 VERAWIDKFIENGYVDTFRMFNSDPGQYTWWSYRTRARERNVGWRLDYFFVNEEFKGKVK 235 Query: 238 SARIDTKPRGWTKPSDHTPV 257 + I + G SDH P+ Sbjct: 236 RSWILSDVMG----SDHCPI 251 >gi|73666996|ref|YP_303012.1| exodeoxyribonuclease III [Ehrlichia canis str. Jake] gi|72394137|gb|AAZ68414.1| Exodeoxyribonuclease III [Ehrlichia canis str. Jake] Length = 279 Score = 189 bits (479), Expect = 4e-46, Method: Composition-based stats. Identities = 97/277 (35%), Positives = 151/277 (54%), Gaps = 17/277 (6%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +ATWNVNSIR R+ +L W+ + + DI LQE K + FPF L+SL Y GQ Sbjct: 2 TLKIATWNVNSIRKRLDHLRHWLVKYDIDIALLQEIKCTNDQFPFLDLESLGYKCYVNGQ 61 Query: 63 KSYNGVAILSKYQPI-----------------EIVTHLPGDDLDVQARFIEATFTINTQT 105 K+ NGVAI++KY + ++ ++R++E N Sbjct: 62 KARNGVAIITKYPIVEELVTDIFSSDYKSSLCYKLSSEGFIYNYQESRYLECVVLYNEVK 121 Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165 +R+ ++Y+P+G + S + K+ + + + A L EE LI GDYN+ P P D Y+ Sbjct: 122 VRVASIYIPNGQSVDSDAFQYKLGFFDQLIDRALFLLNKEEILILGGDYNVAPYPIDVYS 181 Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225 I + CF R+ F+ + N+GFTDA R ++ +S+W+Y A +W +N+G+RID+ Sbjct: 182 TEIMDGRLCFHQYEREKFRVILNLGFTDAFRVLNEHDQKFSWWNYKAGAWQENRGLRIDN 241 Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 ++LSP+A L S I + RG PSDH PVI +L+ Sbjct: 242 LLLSPQAVDKLLSCVIHDELRGLDTPSDHAPVICTLE 278 >gi|288799645|ref|ZP_06405104.1| exodeoxyribonuclease III [Prevotella sp. oral taxon 299 str. F0039] gi|288332893|gb|EFC71372.1| exodeoxyribonuclease III [Prevotella sp. oral taxon 299 str. F0039] Length = 250 Score = 189 bits (479), Expect = 4e-46, Method: Composition-based stats. Identities = 68/259 (26%), Positives = 106/259 (40%), Gaps = 12/259 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + K + D CLQETK + + + + + Sbjct: 1 MKFISWNVNGLRASVTKGFEDIFKTLDADFFCLQETKMQAGQLDLQ-FEGYESYWNYADK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K+ P+ + + D D + R + F + Sbjct: 60 KGYSGTAIYTKHSPLSVQYGIGIDQHDHEGRVVTLEFEQFYLVTVYTPNSQDELKRLDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 +R + +L+ +P++ GD N+ Q D NP +A FT E R+ Sbjct: 120 M------EWERDFQAYLVKLDASKPVVVCGDMNVAHQEIDLKNPKTNRRNAGFTDEEREK 173 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 L + GF D R + YS+W Y + KN G RID+ ++S S L A+I Sbjct: 174 MTNLLDNGFIDTFRYLYPEEVTYSWWSYRFKAREKNTGWRIDYFLISERLKSNLTDAKIH 233 Query: 243 TKPRGWTKPSDHTPVIVSL 261 T G SDH PV + L Sbjct: 234 TDIFG----SDHCPVELDL 248 >gi|29377212|ref|NP_816366.1| exodeoxyribonuclease [Enterococcus faecalis V583] gi|227554220|ref|ZP_03984267.1| exodeoxyribonuclease [Enterococcus faecalis HH22] gi|29344678|gb|AAO82436.1| exodeoxyribonuclease [Enterococcus faecalis V583] gi|227176667|gb|EEI57639.1| exodeoxyribonuclease [Enterococcus faecalis HH22] gi|315573773|gb|EFU85964.1| exodeoxyribonuclease III [Enterococcus faecalis TX0309B] gi|315580287|gb|EFU92478.1| exodeoxyribonuclease III [Enterococcus faecalis TX0309A] Length = 251 Score = 189 bits (479), Expect = 4e-46, Method: Composition-based stats. Identities = 76/261 (29%), Positives = 115/261 (44%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + N E + D CLQETK + E L + + + Sbjct: 1 MKCISWNVNGLRAVVKKNFMDVFNELDADFFCLQETKLQAGQIDLE-LPGYHQYWSYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K + + + L + D + R I + + Sbjct: 60 KGYSGTAIFAKEEALSVRYGLGIEAHDQEGRVITLEYPEF-----FMVTCYTPNSQAELK 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + +++W F + L E+P+I GD N+ Q D N + +A FT E RQ Sbjct: 115 RLAYRMTWEDAFRAY-LNELNQEKPVILCGDLNVAHQNIDLKNWKTNQKNAGFTPEERQK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L + GFTD R + +YS+W Y ++ N G RID+ ++S L SA+I Sbjct: 174 FTELLDSGFTDTFRYFYPEAEGIYSWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 T G SDH PV V LD Sbjct: 234 HTDILG----SDHCPVEVVLD 250 >gi|315174931|gb|EFU18948.1| exodeoxyribonuclease III [Enterococcus faecalis TX1346] Length = 251 Score = 189 bits (479), Expect = 4e-46, Method: Composition-based stats. Identities = 76/261 (29%), Positives = 116/261 (44%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + N E + D CLQETK + E L + + + Sbjct: 1 MKCISWNVNGLRAVVKKNFMDVFNELDADFFCLQETKLQAGQIDLE-LPGYHQYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI++K + + + L + D + R I + + Sbjct: 60 KGYSGTAIVAKEEALSVRYGLGIEAHDQEGRVITLEYPEF-----FMVTCYTPNSQAELK 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + +++W F + L E+P+I GD N+ Q D N + +A FT E RQ Sbjct: 115 RLAYRMTWEDAFRAY-LNELNQEKPVILCGDLNVAHQKIDLKNWKTNQKNAGFTPEERQK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L + GFTD R + +YS+W Y ++ N G RID+ ++S L SA+I Sbjct: 174 FTELLDSGFTDTFRYFYPEAEGIYSWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 T G SDH PV V LD Sbjct: 234 HTDILG----SDHCPVEVVLD 250 >gi|39936370|ref|NP_948646.1| putative exonuclease III [Rhodopseudomonas palustris CGA009] gi|39650225|emb|CAE28748.1| putative exonuclease III [Rhodopseudomonas palustris CGA009] Length = 260 Score = 189 bits (479), Expect = 4e-46, Method: Composition-based stats. Identities = 91/259 (35%), Positives = 141/259 (54%), Gaps = 3/259 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 V +AT+NVN++ R+ L AW+K PDI+CLQE K + +FP L+ Y GQK Sbjct: 5 VKIATFNVNNVNKRLPILLAWLKTARPDIVCLQELKAAEADFPEAALRKAGYAAAWVGQK 64 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 S+NGVA+L++ + I + + + +G LY P+GNP K Sbjct: 65 SWNGVAVLARRREIVVTRRRLPGAPHDKQS---RYIEAAVAGIIVGCLYAPNGNPQPGPK 121 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 +DDK++W+KR R A+ L+ P++ AGD+N++P P D Y W+ DA R+ F Sbjct: 122 FDDKLAWLKRLNRHAATLLKSGAPVVLAGDFNVVPTPADIYPGKSWDKDALVQPAPRKLF 181 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 L G+TDA+R H Y+FW Y+ + + ++ G+RIDH++L P + L A +D Sbjct: 182 AALLRQGWTDALRHCHPEDAPYTFWSYWRNRFERDAGLRIDHLLLDPSLAARLKRAGVDR 241 Query: 244 KPRGWTKPSDHTPVIVSLD 262 K R + SDH P + ++ Sbjct: 242 KVREAPEASDHAPAWIVIE 260 >gi|228471546|ref|ZP_04056321.1| exodeoxyribonuclease III [Capnocytophaga gingivalis ATCC 33624] gi|228277122|gb|EEK15802.1| exodeoxyribonuclease III [Capnocytophaga gingivalis ATCC 33624] Length = 253 Score = 189 bits (479), Expect = 4e-46, Method: Composition-based stats. Identities = 81/262 (30%), Positives = 130/262 (49%), Gaps = 14/262 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY---HIET 59 + + ++NVN IRA + W+K +PD+ICLQE K + L+ + Y + + Sbjct: 1 MKIFSYNVNGIRAAMSKGFTQWLKAADPDVICLQEIKALESQIDLPALEEIGYTYHYFHS 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GVAILSK P ++ D +D + R + A + L I +LYLP G I Sbjct: 61 AEKKGYSGVAILSKTAPTQVEVGAGIDYMDREGRILRADYG----DLSIMSLYLPSGTNI 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 D K+ ++ F + ++ + LI GDYNI + D ++P+ N + F Sbjct: 117 DR--LDHKLQFMADFQNYINELKKTHPNLIICGDYNICHEAIDIHDPVRNANVSGFLPVE 174 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R+ GF D+ R H H YS+W Y A++ + NKG RID+ +++ + L A Sbjct: 175 RKWLDDFLKSGFIDSFRFFHKEPHNYSWWSYRANARANNKGWRIDYCLVAQPLENRLLRA 234 Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261 I + K SDH P++V + Sbjct: 235 AILPEA----KHSDHCPILVEI 252 >gi|257470580|ref|ZP_05634670.1| exodeoxyribonuclease III Xth [Fusobacterium ulcerans ATCC 49185] gi|317064786|ref|ZP_07929271.1| exodeoxyribonuclease III Xth [Fusobacterium ulcerans ATCC 49185] gi|313690462|gb|EFS27297.1| exodeoxyribonuclease III Xth [Fusobacterium ulcerans ATCC 49185] Length = 253 Score = 189 bits (479), Expect = 5e-46, Method: Composition-based stats. Identities = 70/261 (26%), Positives = 115/261 (44%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + K N DI C+QETK ++ E L+ + + + Sbjct: 1 MKLISWNVNGLRAAVQKGFLDYFKNENADIFCVQETKLQEGQIELE-LEGYHQYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +PIE+ L ++ D + R I + ++ Sbjct: 60 KGYSGTAIFTKKKPIEVSYGLGIEEHDKEGRVITLEYDDFYMITVYTPNSQEELARLSYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + R +L+ +P+I GD N+ Q D NP +A F+ E R Sbjct: 120 M------SWEDEFRNYVMKLDKLKPVIICGDLNVAHQEIDLKNPKSNRKNAGFSDEERAK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L GF D+ R + YS+W Y ++ N G RID+ ++S ++ A I Sbjct: 174 FTELLKNGFVDSFRHFYPELTGAYSWWSYRFNARKNNAGWRIDYFVVSERLKDIMEGAEI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 + G SDH PV++ L Sbjct: 234 HNETLG----SDHCPVVLKLK 250 >gi|197303592|ref|ZP_03168630.1| hypothetical protein RUMLAC_02320 [Ruminococcus lactaris ATCC 29176] gi|197297326|gb|EDY31888.1| hypothetical protein RUMLAC_02320 [Ruminococcus lactaris ATCC 29176] Length = 250 Score = 189 bits (479), Expect = 5e-46, Method: Composition-based stats. Identities = 71/261 (27%), Positives = 116/261 (44%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN IRA + + E + DI C+QETK ++ E L+ + + + Sbjct: 1 MKLISWNVNGIRACVQKGFLDFFHEADADIFCIQETKMQEGQLNLE-LERYHQYWNYAVK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G A+ +K +P+ + L ++ D + R I F + Sbjct: 60 KGYSGTAVFTKKEPLSVSYGLGIEEHDQEGRVITCEFEDFYFVTVYTPNSQSELARLDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + R ++LE ++P+I GD N+ + D NP +A FT E R Sbjct: 120 M------KWEDDFRAYLKKLEKKKPVIVTGDLNVAHKEIDLKNPKTNRKNAGFTDEERGK 173 Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L + GF D R + +YS+W Y + +KN G RID+ +S L A+I Sbjct: 174 FTELLDAGFIDTFRYFYPDQEGIYSWWSYRFSARAKNAGWRIDYFCVSECLKDRLADAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 T+ G SDH P+ + L Sbjct: 234 LTEVMG----SDHCPIELDLK 250 >gi|90021640|ref|YP_527467.1| exonuclease III [Saccharophagus degradans 2-40] gi|89951240|gb|ABD81255.1| Exodeoxyribonuclease III [Saccharophagus degradans 2-40] Length = 272 Score = 189 bits (479), Expect = 5e-46, Method: Composition-based stats. Identities = 79/272 (29%), Positives = 125/272 (45%), Gaps = 12/272 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N NSIR R+H L A I ++ PD I +QETK D +FP E +Q++ YH+E GQK Sbjct: 1 MKCISFNTNSIRIRLHQLEAVIAKHQPDFIGIQETKVSDPDFPVEAIQAMGYHVEFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-TQTLRIGNLYLPHGNPITST 122 ++ GVA++SK+ ++ D + Q RFI FT+ + + + N Y P G Sbjct: 61 THYGVALMSKHPFNKVQKGYVTDTEESQKRFILGEFTLPSGKQITVINGYFPQGENRDHP 120 Query: 123 K-YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175 + +K+ + + + L+ GD NI + + F Sbjct: 121 IKFPNKLKYYADLQAHIEASYKPSDLLVVMGDMNISHTDLDIGIGESNRKRWLKDGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT--HHLYSFWDYYADSWSK--NKGIRIDHIMLSPE 231 E R+ KL G D R T+ YS++DY + + + +G+RID I+ S Sbjct: 181 LPEEREWLDKLLGWGLVDTYRQTNPNLEEEQYSWFDYRSKGFEREPKRGLRIDLILASTA 240 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 ++ ID RG K SDH P+ I Sbjct: 241 LAQHSVASGIDYDIRGMEKASDHCPIWTEFSI 272 >gi|329769257|ref|ZP_08260674.1| exodeoxyribonuclease [Gemella sanguinis M325] gi|328839251|gb|EGF88834.1| exodeoxyribonuclease [Gemella sanguinis M325] Length = 254 Score = 189 bits (479), Expect = 5e-46, Method: Composition-based stats. Identities = 70/261 (26%), Positives = 113/261 (43%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + ++NVN +RA + N K+ + D CLQETK + + + + Sbjct: 1 MKCISFNVNGLRAIVGKNFEEDFKKLDADFFCLQETKMQAGQLDLQ-FDGYYSYFNYAER 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +KY+P+ + + ++ D + R I + I G+ + Sbjct: 60 KGYSGTAIYTKYKPLNVTYGIGIEEHDTEGRVITLEY---DNFFFITVYTPNSGSELKRL 116 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 +Y + + L ++ +I GD N+ D NP +A FT E R+ Sbjct: 117 EYR---MSWEDDFKDYLLTLNKDKGVIVCGDLNVAHTEIDLKNPKTNVKNAGFTPEEREK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F KL + GF D R + YS+W Y ++ N G RID+ ++S + L SA+I Sbjct: 174 FTKLLDAGFIDTFRYFNPDLTGAYSWWSYRFNARKNNSGWRIDYFLVSKDLKKYLVSAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 G SDH PV + LD Sbjct: 234 HNDIFG----SDHCPVELVLD 250 >gi|312900096|ref|ZP_07759412.1| exodeoxyribonuclease III [Enterococcus faecalis TX0470] gi|311292731|gb|EFQ71287.1| exodeoxyribonuclease III [Enterococcus faecalis TX0470] Length = 251 Score = 189 bits (479), Expect = 5e-46, Method: Composition-based stats. Identities = 76/261 (29%), Positives = 114/261 (43%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA N E + D CLQETK + E L + + + Sbjct: 1 MKCISWNVNGLRAVFKKNFMDVFNELDADFFCLQETKLQAGQIDLE-LPGYHQYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K + + + L + D + R I + + Sbjct: 60 KGYSGTAIFAKEEALSVRYGLGIEAHDQEGRVITLEYPEF-----FMVTCYTPNSQAELK 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + +++W F + L E+P+I GD N+ Q D N + +A FT E RQ Sbjct: 115 RLAYRMTWEDAFRAY-LNELNQEKPVILCGDLNVAHQKIDLKNWKTNQKNAGFTPEERQK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L + GFTD R + +YS+W Y ++ N G RID+ ++S L SA+I Sbjct: 174 FTELLDSGFTDTFRYFYPEAEGIYSWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 T G SDH PV V LD Sbjct: 234 HTDILG----SDHCPVEVVLD 250 >gi|256961018|ref|ZP_05565189.1| exonuclease III [Enterococcus faecalis Merz96] gi|293384592|ref|ZP_06630458.1| exodeoxyribonuclease III [Enterococcus faecalis R712] gi|293386821|ref|ZP_06631392.1| exodeoxyribonuclease III [Enterococcus faecalis S613] gi|312906418|ref|ZP_07765426.1| exodeoxyribonuclease III [Enterococcus faecalis DAPTO 512] gi|312979423|ref|ZP_07791111.1| exodeoxyribonuclease III [Enterococcus faecalis DAPTO 516] gi|256951514|gb|EEU68146.1| exonuclease III [Enterococcus faecalis Merz96] gi|291078138|gb|EFE15502.1| exodeoxyribonuclease III [Enterococcus faecalis R712] gi|291083824|gb|EFE20787.1| exodeoxyribonuclease III [Enterococcus faecalis S613] gi|310627572|gb|EFQ10855.1| exodeoxyribonuclease III [Enterococcus faecalis DAPTO 512] gi|311287794|gb|EFQ66350.1| exodeoxyribonuclease III [Enterococcus faecalis DAPTO 516] gi|315170467|gb|EFU14484.1| exodeoxyribonuclease III [Enterococcus faecalis TX1342] Length = 251 Score = 189 bits (479), Expect = 5e-46, Method: Composition-based stats. Identities = 76/261 (29%), Positives = 115/261 (44%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + N E + D CLQETK + E L + + + Sbjct: 1 MKCISWNVNGLRAVVKKNFMDVFNELDADFFCLQETKLQAGQIDLE-LPGYHQYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K + + + L + D + R I + + Sbjct: 60 KGYSGTAIFAKEEALSVRYGLGVEAHDQEGRVITLEYPEF-----FMVTCYTPNSQAELK 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + +++W F + L E+P+I GD N+ Q D N + +A FT E RQ Sbjct: 115 RLAYRMTWEDAFRAY-LNELNQEKPVILCGDLNVAHQKIDLKNWKTNQKNAGFTPEERQK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L + GFTD R + +YS+W Y ++ N G RID+ ++S L SA+I Sbjct: 174 FTELLDSGFTDTFRYFYPEAEGIYSWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 T G SDH PV V LD Sbjct: 234 HTDILG----SDHCPVEVVLD 250 >gi|227519480|ref|ZP_03949529.1| exodeoxyribonuclease [Enterococcus faecalis TX0104] gi|227073092|gb|EEI11055.1| exodeoxyribonuclease [Enterococcus faecalis TX0104] gi|315151770|gb|EFT95786.1| exodeoxyribonuclease III [Enterococcus faecalis TX0012] Length = 251 Score = 189 bits (479), Expect = 5e-46, Method: Composition-based stats. Identities = 76/261 (29%), Positives = 115/261 (44%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + N E + D CLQETK + E L + + + Sbjct: 1 MKCISWNVNGLRAVVKKNFMDVFNELDADFFCLQETKLQAGQIDLE-LPGYHQYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K + + + L + D + R I + + Sbjct: 60 KGYSGTAIFAKEEALSVRYGLGIEAHDQEGRVITLEYPEF-----FIVTCYTPNSQAELK 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + +++W F + L E+P+I GD N+ Q D N + +A FT E RQ Sbjct: 115 RLAYRMTWEDAFSAY-LNELNQEKPVILCGDLNVAHQNIDLKNWKTNQKNAGFTPEERQK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L + GFTD R + +YS+W Y ++ N G RID+ ++S L SA+I Sbjct: 174 FTELLDSGFTDTFRYFYPEAEGIYSWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 T G SDH PV V LD Sbjct: 234 HTDILG----SDHCPVEVVLD 250 >gi|288927024|ref|ZP_06420917.1| exodeoxyribonuclease III [Prevotella buccae D17] gi|288336198|gb|EFC74586.1| exodeoxyribonuclease III [Prevotella buccae D17] Length = 249 Score = 189 bits (479), Expect = 5e-46, Method: Composition-based stats. Identities = 68/260 (26%), Positives = 109/260 (41%), Gaps = 12/260 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + K + D CLQETK ++ + + + + + Sbjct: 1 MRFISWNVNGLRACVSKGFEESFKALDADFFCLQETKMQEGQLNLQ-FEGYDSYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K++P+ + L ++ D + R I + Sbjct: 60 KGYSGTAIYTKHKPLNVTYGLGIEEHDHEGRVITLEMEDFYLITVYTPNSQDELRRLDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + Q L+ ++P+I GD N+ + D NP +A FT E R+ Sbjct: 120 M------TWEDDFLKYIQGLDAKKPVIVCGDLNVAHEEIDLKNPKTNRRNAGFTDEEREK 173 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 N GFTD+ R + YS+W Y + KN G RID+ ++S L A+I Sbjct: 174 MTITLNSGFTDSFRYKYPEQVTYSWWSYRFHAREKNAGWRIDYFLISNRLRDRLVDAKIH 233 Query: 243 TKPRGWTKPSDHTPVIVSLD 262 T+ G SDH PV + L Sbjct: 234 TEVYG----SDHCPVELDLK 249 >gi|197106478|ref|YP_002131855.1| exodeoxyribonuclease III [Phenylobacterium zucineum HLK1] gi|196479898|gb|ACG79426.1| exodeoxyribonuclease III [Phenylobacterium zucineum HLK1] Length = 256 Score = 189 bits (479), Expect = 5e-46, Method: Composition-based stats. Identities = 93/261 (35%), Positives = 150/261 (57%), Gaps = 7/261 (2%) Query: 4 VTVATWNV-NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +AT+N+ N ++ R+ NL W+ E PD++CLQE K D FP L++ Y G+ Sbjct: 1 MRIATYNISNVVK-RLPNLLEWLDERRPDVVCLQELKAADALFPQAELEAAGYGAVWQGE 59 Query: 63 KSYNGVAILSKY-QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +++NGVAIL++ +P+ LPGD D QAR++EA + + ++YLP+GNP Sbjct: 60 RTWNGVAILARGAEPVATRYGLPGDPTDRQARYVEAAVNG----VLVASIYLPNGNPQPG 115 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 K+ K++W R + A + P+ AGD+N++P D Y DA + R Sbjct: 116 PKFAYKLAWFDRLIAHAEGLVASGAPVALAGDFNVVPTALDIYRVKPHTTDALQQPQTRA 175 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 ++++L + G+TDA+RA H ++SFWDY ++W ++ G+R+D ++LSP L +A + Sbjct: 176 AWRRLLDQGWTDAVRALHPDAPMFSFWDYLRNAWDRDAGMRLDAVLLSPSLAPRLRAAGV 235 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 D RG SDH PV + LD Sbjct: 236 DRDVRGRPGASDHAPVWIELD 256 >gi|209883511|ref|YP_002287368.1| exodeoxyribonuclease III xth [Oligotropha carboxidovorans OM5] gi|209871707|gb|ACI91503.1| exodeoxyribonuclease III xth [Oligotropha carboxidovorans OM5] Length = 271 Score = 188 bits (478), Expect = 5e-46, Method: Composition-based stats. Identities = 88/268 (32%), Positives = 124/268 (46%), Gaps = 9/268 (3%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQK 63 T+ATWN+NS+R RI +A ++K PD++CLQETK D FP + Q L Y HI GQK Sbjct: 4 TIATWNINSVRLRIDLVAKFLKNRRPDVLCLQETKCIDDVFPLKRFQRLGYEHIALNGQK 63 Query: 64 SYNGVAILSKYQPI-EIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT-- 120 Y+GVAI+SK + + + G L + N Y+P G I Sbjct: 64 GYHGVAIVSKRPFLSKDIRMFCGKVDSRHISVAFGESAGLAAPLVLHNFYVPAGGDIPDP 123 Query: 121 --STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL- 177 + K++ K+S++ E I GD N+ P HD ++ N T Sbjct: 124 ALNPKFEHKLSFLDEMRDCTPLHAEDGANHILVGDLNVAPHEHDVWSHRQLLNVVSHTPV 183 Query: 178 EVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSL 235 E + G+ D R +Y++W Y A W+ N+G R+DHI +SP Sbjct: 184 ECEKLLAVQAQGGWIDVARQRIPMDEKVYTWWSYRAADWTVGNRGRRLDHIWVSPALGDK 243 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + RI R W +PSDH PV LDI Sbjct: 244 VRDFRILRDARSWERPSDHVPVTAVLDI 271 >gi|126463827|ref|YP_001044940.1| exodeoxyribonuclease III Xth [Rhodobacter sphaeroides ATCC 17029] gi|126105638|gb|ABN78168.1| Exodeoxyribonuclease III [Rhodobacter sphaeroides ATCC 17029] Length = 255 Score = 188 bits (478), Expect = 6e-46, Method: Composition-based stats. Identities = 96/258 (37%), Positives = 146/258 (56%), Gaps = 4/258 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+NVN + R+ L W++E PD++CLQE K FP L++ Y GQK Sbjct: 1 MRIATFNVNGVNGRLPVLLRWLEEARPDVVCLQELKAASARFPAAALEAAGYGAVWHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 S+NGVAIL++ D ++R+IEA + +G LYLP+GNP K Sbjct: 61 SWNGVAILARGAEPVQTRQDLPGVQDGESRYIEAAVEG----VLVGCLYLPNGNPAPGPK 116 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K++W L A + L + P++ AGD+N++P D Y P W DA F EVR +F Sbjct: 117 FAAKLAWFDHLLNHAEELLRHDVPVVLAGDFNVMPTDLDVYRPERWREDALFRPEVRAAF 176 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +L G+TD+IR + +Y+FWDY+ ++W ++ G+R+DH++LSP + L A +D Sbjct: 177 ARLLAQGWTDSIRHLYPEDRIYTFWDYFRNAWERDAGLRLDHLLLSPSLLTRLKGAGVDR 236 Query: 244 KPRGWTKPSDHTPVIVSL 261 RGW K SDH P + + Sbjct: 237 HVRGWEKASDHAPAWIEI 254 >gi|157828881|ref|YP_001495123.1| exodeoxyribonuclease III [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933608|ref|YP_001650397.1| exodeoxyribonuclease III [Rickettsia rickettsii str. Iowa] gi|157801362|gb|ABV76615.1| exodeoxyribonuclease III [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908695|gb|ABY72991.1| exodeoxyribonuclease III [Rickettsia rickettsii str. Iowa] Length = 260 Score = 188 bits (478), Expect = 6e-46, Method: Composition-based stats. Identities = 97/259 (37%), Positives = 144/259 (55%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+NSI+ R++ L ++ + NPDI+ LQE K E FPF+ L L Y+ GQK Sbjct: 1 MKIATWNINSIKTRLNLLRNFLSKENPDILLLQEIKCETAKFPFDALSDLPYNSYVHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 SYNGVAI+SK+ EI+ P + QARF+E ++ I +LY P+G+ + S K Sbjct: 61 SYNGVAIISKFPVDEIIKDFPNNYCSDQARFLEIKLSLPIGFCNIISLYAPNGSFVGSDK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+++ F+ + S + +E I GD+NI P D Y+P + CFT ++ Sbjct: 121 FVAKLAFYDNFINYLSTKKSFDEKTIIGGDFNIAPFDIDVYSPKLLAETTCFTEVEQKKL 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + + N GF D R H + +S+WDY A + +NKG+RID I+ L + +D Sbjct: 181 RTILNSGFEDLYRLMHPSKQEFSWWDYRARCFEQNKGMRIDMILGCNNTIDYLENCYMDY 240 Query: 244 KPRGWTKPSDHTPVIVSLD 262 R KPSDH PVI S Sbjct: 241 NLRTQEKPSDHIPVIASFK 259 >gi|93006020|ref|YP_580457.1| exonuclease III [Psychrobacter cryohalolentis K5] gi|92393698|gb|ABE74973.1| Exodeoxyribonuclease III [Psychrobacter cryohalolentis K5] Length = 274 Score = 188 bits (478), Expect = 6e-46, Method: Composition-based stats. Identities = 84/271 (30%), Positives = 131/271 (48%), Gaps = 10/271 (3%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +N+N IRAR H L A +PD++ LQETK D+ FP E ++ L YH+E GQ Sbjct: 1 MTRFVCFNINGIRARQHQLEAVRDIIDPDVMGLQETKVHDEQFPLENVEGLGYHVEYFGQ 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K++ GVA+LSK PI + P +D + Q RFI A + + + + + N Y P G Sbjct: 61 KAHYGVALLSKVAPIFVQKGFPNEDEEAQKRFIHARYEFDGREIDVLNGYFPQGESQDHP 120 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175 K+ K ++ + + L+ GD NI P+ D + F Sbjct: 121 TKFPMKRAYYADLMAYIDTLKAEGRSLVIMGDMNIAPEDIDIGIGEVNAKRWLKNRKTSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKN--KGIRIDHIMLSPEA 232 E R+ + L + TD R + LYS++DY + + + +G+RIDHI+ +P+ Sbjct: 181 LPEEREWYSNLMSRELTDTYRLHYPESTELYSWFDYRSRGFDDDPKRGLRIDHILCTPDL 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 A I + R KPSDH P+ + D+ Sbjct: 241 VECCVDAGISYELRAMEKPSDHAPIWTAFDL 271 >gi|315606307|ref|ZP_07881323.1| exodeoxyribonuclease III [Prevotella buccae ATCC 33574] gi|315251998|gb|EFU31971.1| exodeoxyribonuclease III [Prevotella buccae ATCC 33574] Length = 249 Score = 188 bits (478), Expect = 6e-46, Method: Composition-based stats. Identities = 68/260 (26%), Positives = 109/260 (41%), Gaps = 12/260 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + K + D CLQETK ++ + + + + + Sbjct: 1 MRFISWNVNGLRACVSKGFEESFKALDADFFCLQETKMQEGQLNLQ-FEGYDSYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K++P+ + L ++ D + R I + Sbjct: 60 KGYSGTAIYTKHKPLNVTYGLGIEEHDHEGRVITLEMEDFYLITVYTPNSQDELRRLNYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + Q L+ ++P+I GD N+ + D NP +A FT E R+ Sbjct: 120 M------TWEDDFLKYIQGLDAKKPVIVCGDLNVAHEEIDLKNPKTNRRNAGFTDEEREK 173 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 N GFTD+ R + YS+W Y + KN G RID+ ++S L A+I Sbjct: 174 MTITLNSGFTDSFRYKYPEQVTYSWWSYRFHAREKNAGWRIDYFLISNRLRDRLVDAKIH 233 Query: 243 TKPRGWTKPSDHTPVIVSLD 262 T+ G SDH PV + L Sbjct: 234 TEVYG----SDHCPVELDLK 249 >gi|268608445|ref|ZP_06142172.1| exodeoxyribonuclease [Ruminococcus flavefaciens FD-1] Length = 248 Score = 188 bits (478), Expect = 6e-46, Method: Composition-based stats. Identities = 64/262 (24%), Positives = 111/262 (42%), Gaps = 17/262 (6%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETC 60 + + +WNVN RA + + E + DI C+QETK + YH + Sbjct: 1 MKLISWNVNGFRACLTKGFGDFFAEADADIFCIQETKMQPDQ---ADFSPEGYHKYFHSA 57 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+G A+ +K +P+ + + G+ D + N Sbjct: 58 IKKGYSGTAVYTKKEPLSVTFGINGEHTDEGRVITCEYEDFYFVGCYVPNAQNELKRIDY 117 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 +++ +R L+ ++P+I+ GD N+ D NP +A F+ E R Sbjct: 118 RMEFE-------DAMRGYLSELDKKKPVIYCGDLNVAHNEIDLKNPKSNVGNAGFSDEER 170 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 F +L GF+D+ R+ + YS+W Y + KN G RID+ ++S + ++ Sbjct: 171 GKFTELLAAGFSDSYRSLYPEKIEYSWWSYRFKAREKNIGWRIDYFVVSDRFMPRVKDSQ 230 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I T G SDH PV + ++ Sbjct: 231 ILTDVTG----SDHCPVQLIIE 248 >gi|213965056|ref|ZP_03393254.1| exodeoxyribonuclease III [Corynebacterium amycolatum SK46] gi|213952170|gb|EEB63554.1| exodeoxyribonuclease III [Corynebacterium amycolatum SK46] Length = 265 Score = 188 bits (478), Expect = 6e-46, Method: Composition-based stats. Identities = 72/267 (26%), Positives = 126/267 (47%), Gaps = 9/267 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + WNVNS R R+ + ++ N+ D++ +QETK +D FP T + L Y + G Sbjct: 1 MRICVWNVNSARTRLDRMVEMLRRNDIDVLAVQETKCKDDQFPTATFEELGYQVAHHGLN 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQAR-----FIEATFTINTQTLRIGNLYLPHGNP 118 +NGVAI+S+ +I PG + +R+ +LY+P+G Sbjct: 61 QWNGVAIISRVGLEDIQAGFPGQPGFNKDPDATPSLEARHIAATCGGVRVHSLYIPNGRD 120 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEE--PLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 IT ++ K+ +++R + L+ + + GD+NI P D ++ + T Sbjct: 121 ITDPHFEYKLEFLERLRQHIIATLDDDPEATFMMGGDFNIAPTDGDVWSMAAFTGKTHVT 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 R +F L+ G + R + +++WDY A + K++G+RID + SP + Sbjct: 181 PPERAAFYALEQAGMKEVTRQFTP--NQWTYWDYKAGRFFKDEGMRIDFQLASPALATKA 238 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263 + ID + R SDH PVIV ++ Sbjct: 239 SAGFIDIEERQGKGASDHAPVIVDYEV 265 >gi|281422472|ref|ZP_06253471.1| exodeoxyribonuclease III [Prevotella copri DSM 18205] gi|281403455|gb|EFB34135.1| exodeoxyribonuclease III [Prevotella copri DSM 18205] Length = 250 Score = 188 bits (478), Expect = 6e-46, Method: Composition-based stats. Identities = 73/259 (28%), Positives = 117/259 (45%), Gaps = 12/259 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + + KE + D CLQETK ++ + + + + Sbjct: 1 MKFISWNVNGLRACVGKDFENQFKELDADFFCLQETKMQEGQLDLQ-FEGYESYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K++P+ + + ++ D + R I + + Y P+ Sbjct: 60 KGYSGTAIYTKHKPLNVSYGMGVEEHDHEGRIITLEYD----QFYLVTCYTPNSQTELKR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 D + R + L+ ++P+I GD N+ + D NP +A FT E R+ Sbjct: 116 L--DYRMTWEDDFRKFLKSLDAKKPVIICGDLNVAHEEIDIKNPKTNRRNAGFTDEEREK 173 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 L N GFTD+ R H YS+W Y + KN G RID+ ++S + A+I Sbjct: 174 MTVLLNDGFTDSFRYLHPDEVTYSWWSYRFKAREKNAGWRIDYFLVSDRIKEQITEAKIH 233 Query: 243 TKPRGWTKPSDHTPVIVSL 261 T+ G SDH PV V L Sbjct: 234 TEIMG----SDHCPVEVDL 248 >gi|86130871|ref|ZP_01049470.1| exodeoxyribonuclease III (Xth) [Dokdonia donghaensis MED134] gi|85818282|gb|EAQ39442.1| exodeoxyribonuclease III (Xth) [Dokdonia donghaensis MED134] Length = 254 Score = 188 bits (478), Expect = 6e-46, Method: Composition-based stats. Identities = 73/264 (27%), Positives = 128/264 (48%), Gaps = 13/264 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60 + + ++NVN IRA + + A W+K+ +PD++ LQETK + L Y + + Sbjct: 1 MKIVSYNVNGIRAALRKDFALWLKQTDPDVVLLQETKATPDQVDVAVFEELGYEHYWFSA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GVA+L+K P I +D + R I F + + ++YLP G Sbjct: 61 QKKGYSGVAVLTKKTPKHIEYGTGIASMDFEGRNIRVDFD----DVSVMSMYLPSG--TN 114 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 S + + K+ ++ + ++ + + L+ GDYNI + D ++P+ + + F R Sbjct: 115 SARLEHKLEYMDLLQDYVNELKQDKPNLVIGGDYNICHEAIDIHDPVRNKKVSGFLPVER 174 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + GF D+ R + Y++W Y A++ + NKG RID+ M+S + A Sbjct: 175 EWIGNFMESGFIDSFRHLNKEPDNYTWWSYRANARANNKGWRIDYNMVSEPLKDKISRAI 234 Query: 241 IDTKPRGWTKPSDHTPVIVSLDIP 264 I + K SDH P +V LD+ Sbjct: 235 ILSDA----KHSDHCPHMVELDLS 254 >gi|262200666|ref|YP_003271874.1| exodeoxyribonuclease III Xth [Gordonia bronchialis DSM 43247] gi|262084013|gb|ACY19981.1| exodeoxyribonuclease III Xth [Gordonia bronchialis DSM 43247] Length = 262 Score = 188 bits (478), Expect = 7e-46, Method: Composition-based stats. Identities = 78/263 (29%), Positives = 129/263 (49%), Gaps = 8/263 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSIRAR + AW++ ++ D++ +QETK D FP + Y + GQ Sbjct: 1 MRIATWNVNSIRARSETVVAWMEHHDVDVLAMQETKCHDDAFPLMSFLVAGYDVTHVGQG 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDL---DVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +YNGVAI S+ EI G D + + +R+ +LY+P+G I Sbjct: 61 AYNGVAIASRVGLDEIEVGFEGMPPLSVDGREIVEARAISARCAGVRVWSLYVPNGRAID 120 Query: 121 STKYDDKISWIKRFLRFASQRLELEE--PLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 Y K++W++ ++ L + ++ AGD+N+ + D ++P + + Sbjct: 121 DPHYRYKLAWLEALADRSALWLAHDPAAQIMLAGDWNVAQRDTDVWDPGFFAGKPHVSDA 180 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R + + G TD+ Y+FWDY + + +N+G+RID+ + SP + + Sbjct: 181 ERAAIAAFLDAGLTDSAL---PYADGYTFWDYTSLRFPRNEGMRIDYALCSPALDTRVLG 237 Query: 239 ARIDTKPRGWTKPSDHTPVIVSL 261 A +D R SDH PVIV L Sbjct: 238 ATVDRDARKPKGASDHAPVIVDL 260 >gi|302877288|ref|YP_003845852.1| exodeoxyribonuclease III Xth [Gallionella capsiferriformans ES-2] gi|302580077|gb|ADL54088.1| exodeoxyribonuclease III Xth [Gallionella capsiferriformans ES-2] Length = 254 Score = 188 bits (478), Expect = 7e-46, Method: Composition-based stats. Identities = 66/262 (25%), Positives = 110/262 (41%), Gaps = 13/262 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETC 60 + + + N+N IR+ W+ + + D+ICLQE K + + L L YH Sbjct: 1 MRIISVNLNGIRSASSKGFYEWLAQQDADVICLQELKAQAADMTEHMLTPLGYHGYFHYA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GV I + P ++ L + D + R++ A F + Sbjct: 61 EKKGYSGVGIYCRELPKNVIVGLGIEQFDAEGRYLCADFADYSV-----VSLYLPSGSSG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K S+++ FL + +I GD+NI + D N + ++ F E R Sbjct: 116 EERQGVKFSFMEAFLPHLRELRASGREVIVCGDWNIAHKEIDLKNWRGNKKNSGFLPEER 175 Query: 181 QSFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 +L + GF D R H Y++W +W+KN G RID+ + +P SA Sbjct: 176 AWLTQLFDEVGFVDVFRRVHPELEAYTWWSNRGQAWAKNVGWRIDYQIATPAIAGRATSA 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261 I + R SDH P+I+ Sbjct: 236 SIYKEQR----FSDHAPLIIDY 253 >gi|284030471|ref|YP_003380402.1| exodeoxyribonuclease III Xth [Kribbella flavida DSM 17836] gi|283809764|gb|ADB31603.1| exodeoxyribonuclease III Xth [Kribbella flavida DSM 17836] Length = 286 Score = 188 bits (477), Expect = 7e-46, Method: Composition-based stats. Identities = 88/277 (31%), Positives = 126/277 (45%), Gaps = 15/277 (5%) Query: 7 ATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPF---ETLQSLNYHIETCGQK 63 ATWNVNS++ R+ L W+ E PD++CLQETK D F L + Y G+ Sbjct: 2 ATWNVNSVKQRMPRLLDWLDERAPDVVCLQETKLADDAFSSLLGAELTARGYETALYGEV 61 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVAILSK ++VT + T +RI +LY+P+G S Sbjct: 62 QWNGVAILSKVGLDDVVTGVANAPGFPNPEARAVAATCGG--IRIHSLYVPNGRVPDSEH 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K++W+ + I GD NI P D ++P ++ T RQ+ Sbjct: 120 YHYKLAWLAALRDVVAGG---PAEQIVCGDMNIAPTDADVFDPAAFQGSTHVTAPERQAL 176 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +L G D +R T ++S+WDY A + ++ G+RID + S + +A ID Sbjct: 177 AELMATGLHDVVRDRWPTERVFSYWDYRAGMFHQDLGMRIDLTLASDPVAERVKAAWIDR 236 Query: 244 KPRGWTKPSDHTPVIVSLDI-------PEPRKKQQDS 273 K R T PSDH PVIV LD+ P Sbjct: 237 KARKGTGPSDHAPVIVDLDVAPDGDIGPVVPPPSNPR 273 >gi|313894410|ref|ZP_07827975.1| exodeoxyribonuclease III [Veillonella sp. oral taxon 158 str. F0412] gi|313441234|gb|EFR59661.1| exodeoxyribonuclease III [Veillonella sp. oral taxon 158 str. F0412] Length = 251 Score = 188 bits (477), Expect = 7e-46, Method: Composition-based stats. Identities = 68/262 (25%), Positives = 116/262 (44%), Gaps = 13/262 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + E + DI CLQETK + + E L + + + Sbjct: 1 MKLISWNVNGLRAAVTKGFMESFNELDADIFCLQETKLQPEQISLE-LPGYEQYWNSAVK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G A+ ++ +P+ + + ++ D + R I A + + Y P+ + Sbjct: 60 KGYSGTAVFTRIKPLSVTNGIGIEEHDQEGRVITAEYD----NFYLVCCYTPNSQRELAR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + R L+ ++P+I GD N+ Q D NP +A F+ E R Sbjct: 116 L--EYRMAWEDAFRNYLLELDKKKPVILCGDLNVAHQEIDLKNPKTNRKNAGFSDEERAK 173 Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +L GFTD R + YS+W Y + +N G RID+ + S + A+I Sbjct: 174 MTELLGAGFTDTFRHLYPDAIEQYSWWSYMGKARERNTGWRIDYFITSKRLDDKIQEAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 + G SDH PV + +D+ Sbjct: 234 HQQIFG----SDHCPVELDIDL 251 >gi|310826147|ref|YP_003958504.1| exodeoxyribonuclease III [Eubacterium limosum KIST612] gi|308737881|gb|ADO35541.1| exodeoxyribonuclease III [Eubacterium limosum KIST612] Length = 254 Score = 188 bits (477), Expect = 7e-46, Method: Composition-based stats. Identities = 72/263 (27%), Positives = 112/263 (42%), Gaps = 12/263 (4%) Query: 4 VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC-- 60 + + +WNVN IRA W++ PDI+CLQE K + + YH Sbjct: 1 MKLYSWNVNGIRAVAQKGFTEWVEAAQPDILCLQEVKAAEDQISEDIRCIPGYHSFFHAA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+G A+ K +PI I T L D + + R I + + N+Y P+G Sbjct: 61 ERKGYSGTAVYYKEEPISITTGLSEDRFNHEGRTIIMEYP----EFTLFNIYFPNGQ-KD 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K+ + FL+ + + + +I GD N D NP + F R Sbjct: 116 DERLQFKMDFYDCFLKDVNALVAQGKKVIICGDVNTAHTEMDLKNPKSNAKRSGFLPMER 175 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + G+ D R H YS+W Y ++ + N G RID+ +S A ++ A Sbjct: 176 EWLDHFFENGYVDTYRHLHPDTVEYSWWSYRFNARANNAGWRIDYFFVSDNAIDMVKDAA 235 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263 I T+ G SDH PV + + I Sbjct: 236 IHTEVTG----SDHCPVSIEIKI 254 >gi|256394880|ref|YP_003116444.1| exodeoxyribonuclease III Xth [Catenulispora acidiphila DSM 44928] gi|256361106|gb|ACU74603.1| exodeoxyribonuclease III Xth [Catenulispora acidiphila DSM 44928] Length = 294 Score = 188 bits (477), Expect = 7e-46, Method: Composition-based stats. Identities = 68/278 (24%), Positives = 106/278 (38%), Gaps = 6/278 (2%) Query: 1 MSVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--I 57 M V+TV+T NVN IRA W+K D++CLQE + E FP + +H + Sbjct: 1 MRVLTVSTVNVNGIRAAAAKGFTEWLKATPADVVCLQEVRAEPDQFPADLRAPEGWHTLV 60 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 K GVA+ S+ P + D R+ E T G Sbjct: 61 APAAAKGRAGVALFSRVAPTTTRIGFGTPEFDTAGRYAEMHLPTLTIASLYLPT-GEVGT 119 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + K + +++ + ++ GD+NI D N + + F Sbjct: 120 ERQAEKERFMAGFHAHLSALSTEAAQTGRAILICGDWNIAHDKADIKNWRANQKSSGFLP 179 Query: 178 EVRQS-FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E RQ L G+ D +R H YS+W + ++ + G RID+ M S +L Sbjct: 180 EERQWLTSVLTEAGYADVVRNLHPGVDGPYSWWSFRGKAFDNDTGWRIDYQMASANLAAL 239 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDS 273 SA+++ + SDH PV + D S Sbjct: 240 ATSAKVERAATYAERWSDHAPVTCAYDWDLAAVPAPRS 277 >gi|94499690|ref|ZP_01306227.1| exodeoxyribonuclease III [Oceanobacter sp. RED65] gi|94428444|gb|EAT13417.1| exodeoxyribonuclease III [Oceanobacter sp. RED65] Length = 271 Score = 188 bits (477), Expect = 7e-46, Method: Composition-based stats. Identities = 77/271 (28%), Positives = 128/271 (47%), Gaps = 11/271 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +RAR+H + A + DII LQE K + P ++++ Y + QK Sbjct: 1 MRIVSFNINGVRARLHQIDAIKHQLKADIIGLQEVKAAPEVVPVADIEAIGYKADIHSQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL--RIGNLYLPHGNPITS 121 ++ GVA LS IE PGD D Q RFI + + +N + + + N Sbjct: 61 AHYGVANLSLNPSIECQQGFPGDTDDDQKRFIHSQYKLNNGEILHVLNGYFPQGENRQHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN------DACF 175 TK+ K + + ++ L + ++ GD N+ D F Sbjct: 121 TKFPAKRKYYADLKDYLNKHLSPDNHIVVMGDMNVALHDEDIGIGEQNRKRWLRTEKCAF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKN--KGIRIDHIMLSPEA 232 E R+ Q + + G D+ R H + YS++DY + ++ + +G+RID+I+LS Sbjct: 181 LPEEREWLQGILDWGLADSFRTQHPDTNDRYSWFDYRSKGFADDPKRGLRIDYILLSKSL 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 S L +A ID RG KPSDH P+ V L++ Sbjct: 241 MSKLKTADIDYDIRGMEKPSDHAPIYVELNL 271 >gi|257420126|ref|ZP_05597120.1| exonuclease III [Enterococcus faecalis T11] gi|257161954|gb|EEU91914.1| exonuclease III [Enterococcus faecalis T11] Length = 251 Score = 188 bits (477), Expect = 7e-46, Method: Composition-based stats. Identities = 76/261 (29%), Positives = 115/261 (44%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + N E + D CLQETK + E L + + + Sbjct: 1 MKCISWNVNGLRAVVKKNFMDVFSELDADFFCLQETKLQAGQIDLE-LPGYHQYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K + + + L + D + R I + + Sbjct: 60 KGYSGTAIFAKEEALSVRYGLGVEAHDQEGRVITLEYPEF-----FMVTCYTPNSQAELK 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + +++W F + L E+P+I GD N+ Q D N + +A FT E RQ Sbjct: 115 RLAYRMTWEDAFRAY-LNELNQEKPVILCGDLNVAHQKIDLKNWKTNQKNAGFTPEERQK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L + GFTD R + +YS+W Y ++ N G RID+ ++S L SA+I Sbjct: 174 FTELLDSGFTDTFRYFYPEAEGIYSWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 T G SDH PV V LD Sbjct: 234 HTDILG----SDHCPVEVVLD 250 >gi|148653062|ref|YP_001280155.1| exonuclease III [Psychrobacter sp. PRwf-1] gi|148572146|gb|ABQ94205.1| Exodeoxyribonuclease III [Psychrobacter sp. PRwf-1] Length = 271 Score = 188 bits (477), Expect = 7e-46, Method: Composition-based stats. Identities = 84/270 (31%), Positives = 133/270 (49%), Gaps = 10/270 (3%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + ++N+N IRAR H L A +PD++ LQETK D+ FP E ++SL YH+E GQ Sbjct: 1 MTRFVSFNINGIRARQHQLEAVRDIIDPDVMGLQETKVHDEQFPLELVESLGYHVEFFGQ 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121 K++ GVA++SK +PI + P + D Q RFI A + N Q + + N Y P G Sbjct: 61 KAHYGVALVSKVKPIFVQKGFPDEPEDAQKRFIHARYVFNGQEVDVLNGYFPQGESRNHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175 TK+ K ++ ++ LI GD NI P+ +D + + F Sbjct: 121 TKFPMKRAYYADLNQYIDALKAEGRTLIIMGDMNIAPEDNDIGIGEKNAKRWLSQGKTSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKN--KGIRIDHIMLSPEA 232 E R+ + L + +D R + + +S++DY + + + +G+RIDHI+ + + Sbjct: 181 LPEEREWYSALMSRELSDTYRIHYPDANDTFSWFDYRSRGFDDDPKRGLRIDHILCTQDI 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 A I + R KPSDH P+ S Sbjct: 241 EDKCIDAGISYELRAMEKPSDHAPIWASFK 270 >gi|326335986|ref|ZP_08202163.1| exodeoxyribonuclease III [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325691950|gb|EGD33912.1| exodeoxyribonuclease III [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 253 Score = 188 bits (477), Expect = 7e-46, Method: Composition-based stats. Identities = 79/263 (30%), Positives = 129/263 (49%), Gaps = 14/263 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY---HIET 59 + + ++NVN IRA + W+ +PD+ICLQE K + L+ Y + + Sbjct: 1 MKIFSYNVNGIRAAMSKGFVQWLSAASPDVICLQEIKALESQIDLLALEEAGYRYHYFHS 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GVAILSK +P + D +D + R + A + L I +LYLP G I Sbjct: 61 AEKKGYSGVAILSKKEPEHVEIGTGIDYMDKEGRILRAEYG----DLSIMSLYLPSGTNI 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 D K+ ++ F ++ + ++ L+ GDYNI + D ++PI N + F Sbjct: 117 DR--LDHKLQFMADFQKYINTLKKVHPNLVICGDYNICHEAIDIHDPIRNANVSGFLPVE 174 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R+ GF D+ R + H YS+W Y A++ + NKG RID+ +++ S + A Sbjct: 175 RKWLDDFLKSGFIDSFRFFNKEPHNYSWWSYRANARANNKGWRIDYCLVAQPLESRIVRA 234 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 I + K SDH P++V + Sbjct: 235 AILPEA----KHSDHCPILVEIK 253 >gi|257079900|ref|ZP_05574261.1| exonuclease III [Enterococcus faecalis JH1] gi|294779916|ref|ZP_06745298.1| exodeoxyribonuclease III [Enterococcus faecalis PC1.1] gi|307269235|ref|ZP_07550589.1| exodeoxyribonuclease III [Enterococcus faecalis TX4248] gi|256987930|gb|EEU75232.1| exonuclease III [Enterococcus faecalis JH1] gi|294453028|gb|EFG21448.1| exodeoxyribonuclease III [Enterococcus faecalis PC1.1] gi|306514454|gb|EFM83015.1| exodeoxyribonuclease III [Enterococcus faecalis TX4248] gi|329578016|gb|EGG59431.1| exodeoxyribonuclease III [Enterococcus faecalis TX1467] Length = 251 Score = 188 bits (477), Expect = 7e-46, Method: Composition-based stats. Identities = 76/261 (29%), Positives = 115/261 (44%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + N E + D CLQETK + E L + + + Sbjct: 1 MKCISWNVNGLRAVVKKNFMDVFNELDADFFCLQETKLQAGQIDLE-LPGYHQYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K + + + L + D + R I + + Sbjct: 60 KGYSGTAIFAKEEALSVRYGLGIEAHDQEGRMITLEYPEF-----FMVTCYTPNSQAELK 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + +++W F + L E+P+I GD N+ Q D N + +A FT E RQ Sbjct: 115 RLAYRMTWEDAFRAY-LNELNQEKPVILCGDLNVAHQNIDLKNWKTNQKNAGFTPEERQK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L + GFTD R + +YS+W Y ++ N G RID+ ++S L SA+I Sbjct: 174 FTELLDSGFTDTFRYFYPEAEGIYSWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 T G SDH PV V LD Sbjct: 234 HTDILG----SDHCPVEVVLD 250 >gi|256616763|ref|ZP_05473609.1| exonuclease III [Enterococcus faecalis ATCC 4200] gi|256596290|gb|EEU15466.1| exonuclease III [Enterococcus faecalis ATCC 4200] Length = 251 Score = 188 bits (477), Expect = 7e-46, Method: Composition-based stats. Identities = 75/261 (28%), Positives = 115/261 (44%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WN+N +RA + N E + D CLQETK + E L + + + Sbjct: 1 MKCISWNINGLRAVVKKNFMDVFNELDADFFCLQETKLQAGQIDLE-LPGYHQYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K + + + L + D + R I + + Sbjct: 60 KGYSGTAIFAKEEALSVRYGLGIEAHDQEGRVITLEYPEF-----FMVTCYTPNSQAELK 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + +++W F + L E+P+I GD N+ Q D N + +A FT E RQ Sbjct: 115 RLAYRMTWEDAFRAY-LNELNQEKPVILCGDLNVAHQKIDLKNWKTNQKNAGFTPEERQK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L + GFTD R + +YS+W Y ++ N G RID+ ++S L SA+I Sbjct: 174 FTELLDSGFTDTFRYFYPEAEGIYSWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 T G SDH PV V LD Sbjct: 234 HTDILG----SDHCPVEVVLD 250 >gi|312131268|ref|YP_003998608.1| exodeoxyribonuclease iii xth [Leadbetterella byssophila DSM 17132] gi|311907814|gb|ADQ18255.1| exodeoxyribonuclease III Xth [Leadbetterella byssophila DSM 17132] Length = 254 Score = 188 bits (477), Expect = 8e-46, Method: Composition-based stats. Identities = 75/263 (28%), Positives = 110/263 (41%), Gaps = 12/263 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + T+NVN IR+ I L W+ + NPDI+CLQE K + L YH Sbjct: 1 MKITTFNVNGIRSAINKGLLEWLSKENPDILCLQEIKLSETELVESLFTDLGYHCYWYPA 60 Query: 62 -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GVAILSK +IV + + D + R I A F Sbjct: 61 IKKGYSGVAILSKIPANQIVKGIEHELYDSEGRIILAQFADFQL-----VSAYFPSGTTG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + + K ++ FL +A + PL+ GD NI + D +NP + F E R Sbjct: 116 DVRQEIKYKFLDDFLIYAEKLKATGTPLLICGDVNICHKEIDIHNPKSNAKTSGFLPEER 175 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + GF D R H Y++W Y A + KN G RID+I + + + Sbjct: 176 AWVDRFCECGFVDTFRHKVKDPHHYTWWSYRAGARGKNLGWRIDYIFAANMLPESIQNVH 235 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263 I + SDH PV + + Sbjct: 236 IHSDVM----MSDHCPVSLEFKL 254 >gi|308209125|gb|ADO20907.1| deoxyribonuclease-1 [Saccharopolyspora spinosa] Length = 272 Score = 188 bits (477), Expect = 8e-46, Method: Composition-based stats. Identities = 67/268 (25%), Positives = 111/268 (41%), Gaps = 13/268 (4%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IET 59 V+TV+T NVN +RA W+ D+IC+QET+ E E + +H + Sbjct: 9 VLTVSTVNVNGLRAAAKKGFVEWLAATRADVICMQETRAEPDQLTSEVREPAGWHTVLAP 68 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 K GVAI S+ +P + + D R+ E + + Sbjct: 69 SSAKGRAGVAIYSRAEPAAVRIGFGSAEFDESGRYAEIDLPG-----VVVASLYLPSGDV 123 Query: 120 TSTKYDDKISWIKRFLRF----ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + + D+K ++K F + + ++ GD+NI Q D N + +A F Sbjct: 124 GTPRQDEKERFMKEFRAYLGDLRERAAAEGREVLVCGDWNIAHQQIDLKNWKSNQKEAGF 183 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R ++ + G+ D +R H YS+W Y ++ + G RID+I+ SP S Sbjct: 184 LPEERAWLTEVFDSGYADVLRRLHPEGPGPYSWWSYRGKAFDNDSGWRIDYIVSSPGLAS 243 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 A ++ + SDH PV + D Sbjct: 244 RCTDAYVEKAASYDQRWSDHAPVTAAFD 271 >gi|212694611|ref|ZP_03302739.1| hypothetical protein BACDOR_04139 [Bacteroides dorei DSM 17855] gi|237711123|ref|ZP_04541604.1| exodeoxyribonuclease [Bacteroides sp. 9_1_42FAA] gi|237727489|ref|ZP_04557970.1| exodeoxyribonuclease [Bacteroides sp. D4] gi|265750710|ref|ZP_06086773.1| exodeoxyribonuclease III [Bacteroides sp. 3_1_33FAA] gi|212663112|gb|EEB23686.1| hypothetical protein BACDOR_04139 [Bacteroides dorei DSM 17855] gi|229434345|gb|EEO44422.1| exodeoxyribonuclease [Bacteroides dorei 5_1_36/D4] gi|229454967|gb|EEO60688.1| exodeoxyribonuclease [Bacteroides sp. 9_1_42FAA] gi|263237606|gb|EEZ23056.1| exodeoxyribonuclease III [Bacteroides sp. 3_1_33FAA] Length = 252 Score = 188 bits (477), Expect = 8e-46, Method: Composition-based stats. Identities = 70/263 (26%), Positives = 108/263 (41%), Gaps = 13/263 (4%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ +WNVN +RA A D CLQETK ++ + + + Sbjct: 1 MLKFISWNVNGLRACYDKGFADAFNRLEADFFCLQETKMQEGQLDVQ-FEGYQSYWNYAE 59 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G AI SK +P+ + L ++ D + R I + Sbjct: 60 KKGYSGTAIFSKVKPLSVTYGLGIEEHDHEGRVITLELESYYLITVYTPNSQEELRRLDY 119 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 R ++LE ++P+I GD N+ + D NP +A FT E R Sbjct: 120 RM------KWDDDFRAYLKKLEEKKPVIVCGDLNVAHKEIDLKNPKTNRKNAGFTDEERA 173 Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 F L GFTD R + +YS+W Y + KN G RID+ + S L A+ Sbjct: 174 KFTTLLESGFTDTFRYFYPEQEGIYSWWSYRFKAREKNAGWRIDYFLTSDSLKDKLRGAQ 233 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263 I T G SDH PV +++++ Sbjct: 234 IHTDILG----SDHCPVELTIEL 252 >gi|86739888|ref|YP_480288.1| exodeoxyribonuclease III [Frankia sp. CcI3] gi|86566750|gb|ABD10559.1| Exodeoxyribonuclease III [Frankia sp. CcI3] Length = 304 Score = 188 bits (477), Expect = 8e-46, Method: Composition-based stats. Identities = 82/262 (31%), Positives = 122/262 (46%), Gaps = 6/262 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFP---FETLQSLNYHIETC 60 V +ATWN+NS +AR L W+ PD++CLQETK D F E L Y + Sbjct: 8 VRIATWNINSAKARQARLIEWLDRAEPDVVCLQETKLADDAFLELFDEDLFRRGYRVAHH 67 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 G +NGVAILS+ ++ LPGD T +RI +LY+P+G I Sbjct: 68 GDGRWNGVAILSRDTLDDVARGLPGDPGFPGPEPRAIAATCGG--IRIWSLYVPNGRTID 125 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 Y K++W+ ++ + GD+NI P D ++ +E T R Sbjct: 126 DPHYAYKLAWLAALREVVAEATTQGAVM-TLGDFNIAPTDVDVWDITQFEGATHVTPAER 184 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + +L + G D +RA +Y++WDY + KN G+RID + + + + + Sbjct: 185 AALAELVDAGLIDVLRARWPDDVVYTYWDYRQLCFPKNLGMRIDLALATADVAGRVRAVW 244 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 +D R SDH PVIV LD Sbjct: 245 VDRAARKGVGTSDHAPVIVDLD 266 >gi|262277234|ref|ZP_06055027.1| exodeoxyribonuclease III [alpha proteobacterium HIMB114] gi|262224337|gb|EEY74796.1| exodeoxyribonuclease III [alpha proteobacterium HIMB114] Length = 263 Score = 188 bits (477), Expect = 8e-46, Method: Composition-based stats. Identities = 100/259 (38%), Positives = 155/259 (59%), Gaps = 2/259 (0%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +++WN+NS+R R N+ ++ + +PDII QE K ED FP + + NY+ GQ Sbjct: 7 TMIISSWNINSVRIRTENIEKYLDKIDPDIIMFQEIKCEDDKFPNDFFEKKNYNCYVFGQ 66 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 KSYNGVAI+SK + + I + Q+R I A I + +++ +YLP+GNP+ + Sbjct: 67 KSYNGVAIISKKKLLNIDKSFKD--PNKQSRLIAADIKIAGKLVKLICIYLPNGNPVNTD 124 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 KY K+ W+ F+ F + + + +I GD+NIIP +D NP W NDA + LE+R+ Sbjct: 125 KYPYKLKWLNNFINFIKKEIHNYDGIIIGGDFNIIPNSNDVGNPEDWGNDALYRLEIRKE 184 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F+K+ N+GF D+ R + Y+FWDY SW +NKG+RIDH +++ S + + ID Sbjct: 185 FRKILNLGFKDSFRLFNTEDKQYTFWDYTQGSWQRNKGLRIDHFLITDSICSKIKNVEID 244 Query: 243 TKPRGWTKPSDHTPVIVSL 261 RG KPSDH+P+ V+ Sbjct: 245 KFTRGLNKPSDHSPIRVNF 263 >gi|325679379|ref|ZP_08158964.1| exodeoxyribonuclease III [Ruminococcus albus 8] gi|324108976|gb|EGC03207.1| exodeoxyribonuclease III [Ruminococcus albus 8] Length = 250 Score = 188 bits (477), Expect = 8e-46, Method: Composition-based stats. Identities = 64/264 (24%), Positives = 107/264 (40%), Gaps = 18/264 (6%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETC 60 + + +WNVN RA + + K + DI C+QETK + YH + Sbjct: 1 MKLISWNVNGFRACLQKGFEDFFKSADADIFCIQETKMQPDQ---ADFSPEGYHKYFHSA 57 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+G A+ +K +P + L G D + N Sbjct: 58 VKKGYSGTAVYTKNEPKAVTYGLNGAHTDEGRVITCEYDDFYFVCCYVPNAQNELKRIDY 117 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 +++ +R L+ +P+I+ GD N+ + D NP +A F+ + R Sbjct: 118 RMEFE-------DDMRAYLCGLDKLKPVIYCGDLNVAHEEIDLKNPKSNVGNAGFSDQER 170 Query: 181 QSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 F +L GF D R + +YS+W Y ++ N G RID+ ++S + + Sbjct: 171 GKFTELLAAGFADTFRRLYPETTGVYSWWSYRFNARKNNAGWRIDYFVVSERLMDKVGDS 230 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 +I T G SDH PV + + I Sbjct: 231 KILTDVMG----SDHCPVQLDITI 250 >gi|170780681|ref|YP_001709013.1| putative exonuclease [Clavibacter michiganensis subsp. sepedonicus] gi|169155249|emb|CAQ00350.1| putative exonuclease [Clavibacter michiganensis subsp. sepedonicus] Length = 278 Score = 188 bits (477), Expect = 9e-46, Method: Composition-based stats. Identities = 74/277 (26%), Positives = 125/277 (45%), Gaps = 10/277 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + VATWNVNSIR R+ + W+ + D++ +QE K + + FP + +Y + G Sbjct: 1 MRVATWNVNSIRTRVGRVVDWLVREDVDVLAMQEIKCKPEQFPMAAFEEADYEVAVHGLS 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLD------VQARFIEATFTINTQTLRIGNLYLPHGN 117 +NGVAI S+ ++VT G Q +R+ +LY+P+G Sbjct: 61 QWNGVAIASRLPLEDVVTTFEGMPRFGKPDATGQPPLEARAMGATVAGVRLWSLYVPNGR 120 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACF 175 + Y K+ W++ L + GD+N+ P D ++P ++E Sbjct: 121 ALDDPHYSYKLEWLQALAADTRAWLAADPATPLALMGDWNVAPLDTDVWDPALFEGKTHT 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 + R +F + G D +R + Y++WDY + +N+G+RID I+ + + L Sbjct: 181 SEPERAAFAAFLDAGLADVVRPSIP--EGYTYWDYQQLRFPRNEGMRIDFILGNDRFSEL 238 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQD 272 + + RI R PSDH PV V LD+ + Sbjct: 239 VGAPRIHRDERKGDGPSDHVPVAVDLDVETELDDDRP 275 >gi|257413807|ref|ZP_04744296.2| exodeoxyribonuclease III [Roseburia intestinalis L1-82] gi|257202214|gb|EEV00499.1| exodeoxyribonuclease III [Roseburia intestinalis L1-82] gi|291538795|emb|CBL11906.1| exodeoxyribonuclease III [Roseburia intestinalis XB6B4] Length = 256 Score = 188 bits (477), Expect = 9e-46, Method: Composition-based stats. Identities = 69/265 (26%), Positives = 117/265 (44%), Gaps = 13/265 (4%) Query: 2 SVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 + + + +WNVN +RA I + E + DI C+QE+K ++ L + Sbjct: 3 NTMKLISWNVNGLRACIQKGFLDFFHETDADIFCIQESKLQEGQIDL-PLPGYFSYWNYA 61 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+G AI +K +P+ + + ++ D + R I + + Sbjct: 62 KKKGYSGTAIFTKKEPLNVTYGIGIEEHDKEGRVITLEYPDFYM-----VTCYTPNSQNE 116 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + ++ W F + + L+ +P+I GD N+ + D NP +A F+ E R Sbjct: 117 LARLPYRMQWEDDFRAYLKR-LDGSKPVILCGDLNVAHEEIDLKNPKTNRKNAGFSDEER 175 Query: 181 QSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + KL + GFTD R + +YS+W Y + KN G RID+ + S L A Sbjct: 176 EKMTKLLDAGFTDTFRYFYPDTEQIYSWWSYRFRAREKNAGWRIDYFITSKRMNDKLTGA 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIP 264 +I T G SDH PV + +D+ Sbjct: 236 KIHTDVFG----SDHCPVELDIDLS 256 >gi|203284438|ref|YP_002222178.1| exodeoxyribonuclease III [Borrelia duttonii Ly] gi|201083881|gb|ACH93472.1| exodeoxyribonuclease III [Borrelia duttonii Ly] Length = 254 Score = 188 bits (476), Expect = 9e-46, Method: Composition-based stats. Identities = 63/261 (24%), Positives = 101/261 (38%), Gaps = 9/261 (3%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ + +WNVN IRA +I E +PDI+CLQETK + P E + Y+ Sbjct: 1 MMNLISWNVNGIRAVSNKGFLNFIAEYSPDILCLQETKALKEQLPRELIDIEGYYSYFSK 60 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 + + I ++ + E I I + Sbjct: 61 SIIKGYSGVAIYSKIEPIKLENMNIEIFDR----EGRCIIAHYHDFILINAYFPNSQSLR 116 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + + K+ ++ A+ + + LI GD+NI D NP A F +E Sbjct: 117 KRLNYKLEFLMSLESIANSFVTSGKNLIVCGDFNIAHTEIDLSNPKTSRESAGFYVEETN 176 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 N G+ D R + Y++WDY + +N G RID+ +++ S + A I Sbjct: 177 WMDNFLNRGYVDTFRMFNKEPGNYTWWDYKTRARERNVGWRIDYFVINKAFQSKVKDALI 236 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 K G SDH PV + L Sbjct: 237 LNKVMG----SDHCPVFLKLK 253 >gi|300726843|ref|ZP_07060273.1| exodeoxyribonuclease III [Prevotella bryantii B14] gi|299775956|gb|EFI72536.1| exodeoxyribonuclease III [Prevotella bryantii B14] Length = 250 Score = 188 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 65/261 (24%), Positives = 110/261 (42%), Gaps = 12/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + K + D C+QETK ++ + + Sbjct: 1 MKLISWNVNGLRACVTKGFKETFKSFDADFFCIQETKMQEGQLDLQ-FDGYESFWNYADK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +P+ + + DD + + R I + + Sbjct: 60 KGYSGTAIYAKTKPLNVTYGIDIDDHNHEGRVITLEYDNFFLVTVYTPNSQNELKRLNYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 ++ + +L+ +P+I GD N+ Q D NP A FT E R+ Sbjct: 120 M------IWEKDFQTYLHKLDKRKPIIVCGDMNVAHQEIDIKNPKTNHKSAGFTDEEREK 173 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 +L + GFTD R + YS+W Y + KN G RID+ ++S + A+I Sbjct: 174 MTQLLSNGFTDTFRFKYPEQITYSWWSYRFRAREKNAGWRIDYFLVSDRIKEKVLDAKIH 233 Query: 243 TKPRGWTKPSDHTPVIVSLDI 263 T G SDH PV +++++ Sbjct: 234 TDIMG----SDHCPVELTIEL 250 >gi|253574957|ref|ZP_04852296.1| exodeoxyribonuclease III [Paenibacillus sp. oral taxon 786 str. D14] gi|251845413|gb|EES73422.1| exodeoxyribonuclease III [Paenibacillus sp. oral taxon 786 str. D14] Length = 251 Score = 188 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 67/262 (25%), Positives = 111/262 (42%), Gaps = 13/262 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + KE + DI CLQETK ++ + + + Sbjct: 1 MKLVSWNVNGLRACVGKGFLDYFKEADADIFCLQETKLQEGQIELDLGSEYEQYWNYAEK 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G A+ ++ +P+ + + D T+ N + Sbjct: 61 KGYSGTAVFTRIKPLSVRYGMEEDYEPEGRIITLEFEQFYLVTVYTPNA------KRDLS 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + D ++ W RF + L+ +P+I GD N+ P D N E ++ +TLE R Sbjct: 115 RLDYRMEWEDRFRTY-LTGLDAVKPVIVCGDLNVAHNPIDIKNAKSNEGNSGYTLEERGK 173 Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +L GF D R + +YS+W Y +N G RID+ + S L A I Sbjct: 174 MTELLASGFIDTFRHFYPDREGVYSWWSYMPKIRERNIGWRIDYFLASSRLAPKLQDAGI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 D G SDH PV ++++ Sbjct: 234 DCHILG----SDHCPVSLTVEW 251 >gi|300771561|ref|ZP_07081436.1| exodeoxyribonuclease III [Sphingobacterium spiritivorum ATCC 33861] gi|300761550|gb|EFK58371.1| exodeoxyribonuclease III [Sphingobacterium spiritivorum ATCC 33861] Length = 255 Score = 188 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 74/262 (28%), Positives = 117/262 (44%), Gaps = 13/262 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPF-ETLQSLNY--HIET 59 + + T+NVN +RA + W+K N D+ICLQE K P L+ L Y + Sbjct: 1 MKIITYNVNGLRAALKKGWLDWLKSTNADVICLQEIKATPDLIPEIALLEQLGYEHYWYP 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G AI +K P + + D + R I A F + Sbjct: 61 AQKKGYSGTAIFTKVSPKRVEYGCGHELYDFEGRIIRADFEKFSVMST-----YFPSGTT 115 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 T+ K ++ F +++ + L+ LI GDYNI + D +NP N + F E Sbjct: 116 GETRQTFKYQFLDDFQQYSDRLLKDIPNLIVCGDYNICHRAIDIHNPKSNANTSGFLPEE 175 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R+ + N G+ D+ R + H YS+W Y A + ++N G RID+ M+S S + + Sbjct: 176 REWMENFINSGYVDSFRHLNPEPHQYSWWSYRAGARARNLGWRIDYNMVSAPLASQIEKS 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261 + SDH PV+V + Sbjct: 236 YLLNDA----VHSDHCPVVVEI 253 >gi|254384957|ref|ZP_05000292.1| exodeoxyribonuclease [Streptomyces sp. Mg1] gi|194343837|gb|EDX24803.1| exodeoxyribonuclease [Streptomyces sp. Mg1] Length = 268 Score = 188 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 58/265 (21%), Positives = 101/265 (38%), Gaps = 6/265 (2%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IET 59 ++TV + NVN IRA W+ ++ D++CLQE + E+ P E +H Sbjct: 2 MLTVTSVNVNGIRAAAKKGFVPWLAGSDADVVCLQEVRAEEAQIPDEARVPEGWHTVFAP 61 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 K GVA+ ++ +P + ++ D R++E T + G Sbjct: 62 AAAKGRAGVAVYTRREPERVRVGFGSEEFDTSGRYLEVDLPGVTVA-SLYLPSGEAGTEK 120 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 KY ++ + ++ GD+NI + D N +A F E Sbjct: 121 QDEKYRFMGEFLTYLEGLRERAAAEGREVVVCGDWNICHREADLKNWKTNRKNAGFLPEE 180 Query: 180 RQSFQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 R ++ + DT YS+W Y ++ + G RID + +P + Sbjct: 181 RAWLGEVYDRAGYVDVVRALHPDTEGPYSWWSYRGRAFDNDAGWRIDLQVATPGLAARAV 240 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLD 262 A ++ + SDH PV V + Sbjct: 241 KAFVERAETHPERWSDHAPVTVVYE 265 >gi|331092367|ref|ZP_08341193.1| exodeoxyribonuclease [Lachnospiraceae bacterium 2_1_46FAA] gi|330401391|gb|EGG80977.1| exodeoxyribonuclease [Lachnospiraceae bacterium 2_1_46FAA] Length = 250 Score = 188 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 74/261 (28%), Positives = 123/261 (47%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN IRA + + + + DI C+QE+K ++ E L+ + + + Sbjct: 1 MKLISWNVNGIRACVQKGFLDFFHQADADIFCIQESKMQEGQLQLE-LEGYHQYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G A+ +K +P+ + + ++ D + R T+ +Y P+ + Sbjct: 60 KGYSGTAVFTKEEPLSVTYGMGIEEHDKEGRL----ITLEFPEFYFATVYTPNSQNELAR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 D ++ W FL + + LE ++P+IF GD N+ + D NP +A FT E R Sbjct: 116 -LDYRMQWETDFLAYMKK-LEEKKPVIFCGDLNVAHREIDLKNPKTNRKNAGFTDEERGK 173 Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L + GF D R + +YS+W Y + KN G RID+ +S L A+I Sbjct: 174 FGELLDAGFIDTFRYFYPDMEGIYSWWSYRFRAREKNAGWRIDYFCVSESLRERLADAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 T G SDH PV + L Sbjct: 234 LTYIFG----SDHCPVELDLK 250 >gi|312198907|ref|YP_004018968.1| exodeoxyribonuclease III Xth [Frankia sp. EuI1c] gi|311230243|gb|ADP83098.1| exodeoxyribonuclease III Xth [Frankia sp. EuI1c] Length = 305 Score = 188 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 77/262 (29%), Positives = 123/262 (46%), Gaps = 6/262 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL---NYHIETC 60 + +ATWN+NS +AR L W+ PD++CLQETK +D+ F + L Y Sbjct: 1 MRIATWNINSAKARQARLIEWLDRAQPDVVCLQETKLDDEAFAENFDEDLFRRGYRYAHH 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 G +NGVA+LS+ ++ GD + T +R+ +LY+P+G Sbjct: 61 GDGRWNGVALLSRAGLDDVARGFAGDPGFPEPEPRAIAATCGG--IRVWSLYVPNGRTPD 118 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 Y K+ W+ ++ + + GD+NI P D ++P + T R Sbjct: 119 DPHYAYKLRWLAALRDTVAEVAAHQPVM-ALGDFNIAPTDADVWDPADFVGATHVTEPER 177 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + ++L +G D +RA +Y++WDY A + KN G+RID + + + + Sbjct: 178 AALRELTGVGLIDVLRARWPDETVYTYWDYRALCFPKNMGMRIDLTLAGADVAKRVAAVY 237 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 +D R T SDH PVIV LD Sbjct: 238 VDRAARKGTGTSDHAPVIVDLD 259 >gi|15893514|ref|NP_346863.1| exodeoxyribonuclease (exoA) [Clostridium acetobutylicum ATCC 824] gi|15023055|gb|AAK78203.1|AE007535_5 Exodeoxyribonuclease (exoA) [Clostridium acetobutylicum ATCC 824] gi|325507632|gb|ADZ19268.1| Exodeoxyribonuclease (exoA) [Clostridium acetobutylicum EA 2018] Length = 250 Score = 188 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 72/261 (27%), Positives = 107/261 (40%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA I + KE + D+ CLQETK ++ E L + Sbjct: 1 MKLISWNVNGLRACITKGFLDYFKEVDADVFCLQETKIQEGQVELE-LPGYYDFWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +PI + + D + R I F + Sbjct: 60 KGYSGTAIFTKKKPISYSYGINEEKHDKEGRVITLEFEDFYMVTVYTPNSKEKLARLEYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + R + L+ ++P+I GD N+ D NP +A F+ E R Sbjct: 120 M------EWEDSFRNYLKALDEKKPVIVCGDMNVAHTEIDLKNPKTNTKNAGFSPEERSK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L GF D R + +YS+W Y + KN G RID+ S L SA I Sbjct: 174 FTELLEAGFIDTYRYFYPDKEGIYSWWSYRFKAREKNAGWRIDYFCTSERLKDKLVSADI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 T+ G SDH PV + + Sbjct: 234 HTEVMG----SDHCPVELVIK 250 >gi|284042535|ref|YP_003392875.1| exodeoxyribonuclease III Xth [Conexibacter woesei DSM 14684] gi|283946756|gb|ADB49500.1| exodeoxyribonuclease III Xth [Conexibacter woesei DSM 14684] Length = 262 Score = 188 bits (476), Expect = 1e-45, Method: Composition-based stats. Identities = 70/261 (26%), Positives = 121/261 (46%), Gaps = 5/261 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + TWNVNS+R R+ + ++ E+ PD++CLQETKT+ FP L + Y Sbjct: 1 MRLVTWNVNSLRVRLPRVLEFLAEHRPDVLCLQETKTDAAAFPHAELAAAGYVAADHSGG 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 + GVAI+++ + + + G + LR+ ++Y+P+G + S Sbjct: 61 RWAGVAIVARTE-LGVADPAVGLPGEPAQDESRWIEATVGGELRVASVYVPNGRELESEW 119 Query: 124 Y----DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 Y + + +R PL+ AGD N+ P D Y+P ++ + Sbjct: 120 YAAKLEFLDAMARRVGELRGDDAGAPLPLVVAGDMNVAPSDLDVYDPAVFATSTHTSAAE 179 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R + + ++ G DA R H Y++WDY + + G+RID I+ SP+ L Sbjct: 180 RTALRAVEQAGLLDAYRQLHPDDVGYTWWDYRQGHFHRGLGLRIDLILASPDLAERLTRV 239 Query: 240 RIDTKPRGWTKPSDHTPVIVS 260 I+ R ++PSDH P++ Sbjct: 240 GIERDYRKGSRPSDHVPLVAD 260 >gi|238018561|ref|ZP_04598987.1| hypothetical protein VEIDISOL_00388 [Veillonella dispar ATCC 17748] gi|237865032|gb|EEP66322.1| hypothetical protein VEIDISOL_00388 [Veillonella dispar ATCC 17748] Length = 251 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 68/262 (25%), Positives = 115/262 (43%), Gaps = 13/262 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + E + DI CLQETK + E L + + + Sbjct: 1 MKLISWNVNGLRAAVTKGFMESFNELDADIFCLQETKLQPDQISLE-LPGYEQYWNSAVK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G A+ ++ +P+ + + ++ D + R I A + + Y P+ + Sbjct: 60 KGYSGTAVFTRIKPLSVTNGIGIEEHDQEGRVITAEYD----NFYLVCCYTPNSQRELAR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + R L+ ++P+I GD N+ Q D NP +A F+ E R Sbjct: 116 L--EYRMAWEDAFRNYLLELDKKKPVILCGDLNVAHQEIDLKNPKTNRKNAGFSDEERAK 173 Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +L GFTD R + YS+W Y + +N G RID+ + S + A+I Sbjct: 174 MTELLGAGFTDTFRHLYPDAIEEYSWWSYMGKARERNTGWRIDYFITSKRLDDKIQEAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 + G SDH PV + +D+ Sbjct: 234 HQQIFG----SDHCPVELDIDL 251 >gi|312878938|ref|ZP_07738738.1| exodeoxyribonuclease III Xth [Aminomonas paucivorans DSM 12260] gi|310782229|gb|EFQ22627.1| exodeoxyribonuclease III Xth [Aminomonas paucivorans DSM 12260] Length = 261 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 81/259 (31%), Positives = 132/259 (50%), Gaps = 4/259 (1%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 MS+ VA++NVNS++ R+ L W+ E+ D++CLQETK +D +FP + L YH+ Sbjct: 1 MSIFKVASFNVNSVKTRLPILERWLGEDPVDVLCLQETKVQDPDFPVSAFRDLGYHVAFR 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 G KSYNGVA+ S+ +P E+ + + + L + N Y+P G + Sbjct: 61 GMKSYNGVAVASREEPDEVAFGFGDGEEPDDGPRVA---RVRFGDLTVLNTYVPQGKALE 117 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K+ + +R L + +P+++ GD N+ P D +P + CF +V+ Sbjct: 118 HPDFLYKLRFFERVLALLERHCREADPVLWTGDLNVAPTDRDVTHPENKRDHVCFHRDVQ 177 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYY-ADSWSKNKGIRIDHIMLSPEATSLLHSA 239 ++F+ + + G D R +SFWDY DS ++N G RIDH++ SP A Sbjct: 178 RAFRDVLSWGLEDVYRKHRPGDGEFSFWDYRVRDSLARNIGWRIDHLLASPPLAERSVDA 237 Query: 240 RIDTKPRGWTKPSDHTPVI 258 + R +PSDHT V+ Sbjct: 238 YAVRELRAQERPSDHTAVV 256 >gi|254786174|ref|YP_003073603.1| exonuclease III [Teredinibacter turnerae T7901] gi|237686598|gb|ACR13862.1| exodeoxyribonuclease III [Teredinibacter turnerae T7901] Length = 273 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 92/271 (33%), Positives = 136/271 (50%), Gaps = 11/271 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 +T ++NVNSIR R+H L A +++ NPD I LQETK D+NFP E ++ L YH+E GQK Sbjct: 3 ITCVSFNVNSIRTRLHQLEAVVEKYNPDFIGLQETKVADENFPREDIERLGYHVEFLGQK 62 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI-NTQTLRIGNLYLPHGNPITST 122 ++ GVA++SK+ + + D D Q RFI F I + L + N Y P G T Sbjct: 63 THYGVALMSKHPFLSVQKGFATDGEDAQKRFIVGQFEIGADKPLTVMNGYFPQGESNTHP 122 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175 K+ +K ++ + + E+ LI GD NI PQ D + F Sbjct: 123 VKFPNKRNFYSDLQSLLTGQYSPEDNLIVMGDMNISPQDIDIGIGEDNRKRWLRSGKCSF 182 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKN--KGIRIDHIMLSPEA 232 E R+ +L G D +R LYS++DY + + + +G+RID I+ + + Sbjct: 183 LPEEREWLDRLLCWGLHDTLRKLQPEADDLYSWFDYRSRGYEREPRRGLRIDLILATQQL 242 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +A ID + RG KPSDH P+ I Sbjct: 243 VEKCSNAGIDLEIRGMEKPSDHCPIWAEFSI 273 >gi|326778748|ref|ZP_08238013.1| exodeoxyribonuclease III Xth [Streptomyces cf. griseus XylebKG-1] gi|326659081|gb|EGE43927.1| exodeoxyribonuclease III Xth [Streptomyces cf. griseus XylebKG-1] Length = 271 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 58/270 (21%), Positives = 101/270 (37%), Gaps = 10/270 (3%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++TV + NVN +RA W+ + D++CLQE + E P E +H Sbjct: 1 MLTVTSVNVNGLRAAAKKGFVEWLAGTDADVVCLQEVRAELAQLPEEVGAPEGWHTVHAP 60 Query: 62 Q--KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIE--ATFTINTQTLRIGNLYLPHGN 117 K GV++ S+ P G + F I+ + + +LYLP G Sbjct: 61 AAAKGRAGVSLYSRQAPERTQIGFGGFGVPGAEEFDASGRYAEIDLPGVTVASLYLPSGE 120 Query: 118 PITSTKYD---DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 T + + +++ ++ ++ GD+NI + D N + Sbjct: 121 VGTERQDEKERFMAAFLPYLQGLKARAAADGREVVVCGDWNIAHREADLKNWKANRKSSG 180 Query: 175 FTLEVRQSFQKLQNMGFTDAIRA--THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 F E R ++ + D YS+W Y ++ + G RID+ M +P Sbjct: 181 FLPEERAWLTRVLEEAAYVDVVRALHPDVEGPYSWWSYRGRAFDNDSGWRIDYQMATPGL 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 A ++ + SDH PV V + Sbjct: 241 AGRAVKAWVERAATHGERWSDHAPVTVVYE 270 >gi|124010283|ref|ZP_01694936.1| exodeoxyribonuclease III [Microscilla marina ATCC 23134] gi|123983668|gb|EAY24108.1| exodeoxyribonuclease III [Microscilla marina ATCC 23134] Length = 259 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 71/263 (26%), Positives = 121/263 (46%), Gaps = 8/263 (3%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + ++NVN IRA I L W+K + D++C+QE K ++ L++L YH+ Sbjct: 1 MKIISYNVNGIRAAIRKGLVEWLKAADCDVLCIQELKALEEQVDTAELEALGYHLYWQPA 60 Query: 62 --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GVAI S+ +P +V D + I + + + Sbjct: 61 QTRKGYSGVAIFSRIKPNNVVYGYGDYDWHDTRWIDDEGRIIRADYDNFSVMSVYMPSGT 120 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K+ W F ++ ++ ++ LI GDYNI Q D +NP + F E Sbjct: 121 KPERVVFKMEWNLAFQQYITELKKVVPHLIICGDYNIAHQAIDIHNPKSNAKRSGFLPEE 180 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R +GFTD+ R + H Y++W+ ++ +KN G RID+ M+S L A Sbjct: 181 RNWLTDFMELGFTDSFRYLNPEPHNYTWWNVRTNARAKNLGWRIDYQMISKSLNENLKRA 240 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 I ++ SDH P+++ +D Sbjct: 241 VILSEAM----HSDHCPILIEVD 259 >gi|223985143|ref|ZP_03635238.1| hypothetical protein HOLDEFILI_02544 [Holdemania filiformis DSM 12042] gi|223962889|gb|EEF67306.1| hypothetical protein HOLDEFILI_02544 [Holdemania filiformis DSM 12042] Length = 252 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 60/260 (23%), Positives = 107/260 (41%), Gaps = 10/260 (3%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA I + E + DI LQETK + E L + + + + Sbjct: 1 MKLISWNVNGLRACIQKGFMDFFNEQDADIFALQETKLQPHQIELE-LPGYHQYWHSAER 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G A+ +K +P+ + + + T + Sbjct: 60 KGYSGTAVFTKQKPLSVRYDFDEAEGEHPKEGRVITLEFEQFYFVTAYVPNSKEELARLD 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + +L +P+++ GD N+ + D NP + F+ + RQ Sbjct: 120 Y----RMQWEDAMARHLAKLNETKPVVYTGDLNVAVEEIDLKNPKTNHFNPGFSDQERQK 175 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 + L ++GF D R + YS+W Y +S +KN G RID+ ++S + + + I Sbjct: 176 MRDLLSLGFADTFRTLYPEKVEYSWWSYRFNSRAKNVGWRIDYFIVSQRLMNQVKDSVIY 235 Query: 243 TKPRGWTKPSDHTPVIVSLD 262 G SDH PV V ++ Sbjct: 236 GDILG----SDHCPVGVEIE 251 >gi|307719602|ref|YP_003875134.1| hypothetical protein STHERM_c19260 [Spirochaeta thermophila DSM 6192] gi|306533327|gb|ADN02861.1| hypothetical protein STHERM_c19260 [Spirochaeta thermophila DSM 6192] Length = 256 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 65/264 (24%), Positives = 108/264 (40%), Gaps = 13/264 (4%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC- 60 +++V +WNVN IRA L WI++ P+I+CLQETK P E + YH Sbjct: 1 MISVYSWNVNGIRAAAKKGLLEWIEKERPEILCLQETKARKDQLPSELARPDGYHTYWAE 60 Query: 61 -GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 + Y+GVA+ + ++P + L V E I + + Sbjct: 61 ADKPGYSGVALFTLHEPASVE------PLGVDEFDREGRTLIADFRSFVLFDCYFPNSQE 114 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + D K+++ A + ++ +GD+NI P D P E + + E Sbjct: 115 AGARLDYKLAYCNAVKERADAYVAAGRHVLISGDFNIAHTPLDLARPEANEKNPGYLPEE 174 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R+ + G+ D R Y++W Y + K+ G RID+ + + + Sbjct: 175 REWMTYFLSSGYVDTFRMFTKEGGHYTWWTYRFKAREKDIGWRIDYHCVDERFKDKVKES 234 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 I G SDH PV ++LD+ Sbjct: 235 VILKDVMG----SDHCPVKITLDV 254 >gi|51473856|ref|YP_067613.1| exonuclease III [Rickettsia typhi str. Wilmington] gi|51460168|gb|AAU04131.1| E.coli exonuclease III [Rickettsia typhi str. Wilmington] Length = 270 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 93/258 (36%), Positives = 140/258 (54%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+NSI+ R++ L ++ + N DI+ LQE K E + FPF+ L L YH GQK Sbjct: 1 MKIATWNINSIKTRLNLLRNFLSKENLDILLLQEIKCETEKFPFDELSDLPYHFYVHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 SYNGVAI+SK+ +I+ + QARFIE +++ I +LY P+G+ ++S K Sbjct: 61 SYNGVAIISKFPADKIIKDFQNNYCSDQARFIEIKLSLSIGYSNIISLYAPNGSFVSSNK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + +K+ + F+ + S + E I GD+NI P D Y+ + C T ++ Sbjct: 121 FVEKLKFYDNFINYLSTKKSCYEKTIIGGDFNIAPFDIDVYSSKVLTETTCCTKVEQKKL 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + + N GF D R H +S+WDY A + KNKG+RID I+ L +D Sbjct: 181 RTILNSGFEDLYRLMHPNKQEFSWWDYRAGCFEKNKGMRIDMILGCNNTIDYLEKCYMDY 240 Query: 244 KPRGWTKPSDHTPVIVSL 261 R KPSDH P+I + Sbjct: 241 NFRTQKKPSDHIPIIANF 258 >gi|321313648|ref|YP_004205935.1| apurinic/apyrimidinic endonuclease [Bacillus subtilis BSn5] gi|320019922|gb|ADV94908.1| apurinic/apyrimidinic endonuclease [Bacillus subtilis BSn5] Length = 252 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 74/265 (27%), Positives = 121/265 (45%), Gaps = 18/265 (6%) Query: 4 VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + +WNVN +RA + +++KE + DIICLQETK +D LQ YH+ Sbjct: 1 MKLISWNVNGLRAVMRKMDFLSYLKEEDADIICLQETKIQDGQVD---LQPEGYHVYWNY 57 Query: 62 --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G A+ SK +P++++ + ++ D + R I F I Sbjct: 58 AVKKGYSGTAVFSKQEPLQVIYGIGVEEHDQEGRVITLEFENVFVMTVYTPNSRRGLERI 117 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + L L+ ++P+I GD N+ Q D NP N+A F+ + Sbjct: 118 DYRMQ------WEEALLSYILELDQKKPVILCGDLNVAHQEIDLKNPKANRNNAGFSDQE 171 Query: 180 RQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R++F + GF D+ R + YS+W Y A + +N G RID+ ++S + Sbjct: 172 REAFTRFLEAGFVDSFRHVYPDLEGAYSWWSYRAGARDRNIGWRIDYFVVSESLKEQIED 231 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263 A I G SDH PV + ++I Sbjct: 232 ASISADVMG----SDHCPVELIINI 252 >gi|153871651|ref|ZP_02000768.1| Endonuclease/exonuclease/phosphatase [Beggiatoa sp. PS] gi|152071885|gb|EDN69234.1| Endonuclease/exonuclease/phosphatase [Beggiatoa sp. PS] Length = 257 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 68/263 (25%), Positives = 120/263 (45%), Gaps = 13/263 (4%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + T N+N IRA W+ E D++C+QETK ++ YH Sbjct: 1 MRIITVNLNGIRAAAKKGFFDWLVEQGADVVCIQETKAQEHQLTDSQFHPAGYHCYYHDA 60 Query: 62 -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GVA+ ++ +P E++ + D+D + R++EA F Sbjct: 61 EKKGYSGVALYARQEPQEVIKGIGWTDIDSEGRYLEARFPHVNI-----VSLYLPSGTSG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + + + K+S+++RF+ + + + I GD+NI + D N +N + F E R Sbjct: 116 THRQEIKVSFMERFMPYLRELQASPKEYILCGDWNIAHKQIDLKNWRSNQNHSGFLPEER 175 Query: 181 QSFQKLQN-MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 +L + F DA R + Y++W + +W N G RID+ +++P T + SA Sbjct: 176 AWMDELFGPVRFADAFRVINQESEQYTWWSHRGRAWDNNTGWRIDYQVITPGLTEKVKSA 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 I + R SDH P+ V + Sbjct: 236 SIYKEKR----FSDHAPLTVDYE 254 >gi|72161943|ref|YP_289600.1| AP endonuclease [Thermobifida fusca YX] gi|71915675|gb|AAZ55577.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Thermobifida fusca YX] Length = 267 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 63/266 (23%), Positives = 104/266 (39%), Gaps = 6/266 (2%) Query: 1 MSVVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE- 58 MS + +AT NVN +RA W+ D++CLQET+ E P E + +H+ Sbjct: 1 MSSLVIATVNVNGLRAAARKGFVEWLAGTKADVVCLQETRAELDQLPPEVAEPDGWHVVL 60 Query: 59 -TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 K GVA+ S+ +P + + R++EA F + + G Sbjct: 61 VPAATKGRAGVAVYSRMKPDAVRIGFGSAEFADSGRYVEADFGPVSVA-SLYLPSGQVGT 119 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 P+ K ++ +R ++ L GD+NI Q D N ++ F Sbjct: 120 PLQEEKERFMAEFLPYLVRRRTEVEAQGRELAVCGDWNIAHQEADLKNWRGNRKNSGFLP 179 Query: 178 EVRQSFQKLQNM--GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E RQ ++ D Y++W Y ++ + G RID + +P + Sbjct: 180 EERQWLSRVYEEAGYVDVVRALHPDQDGPYTWWSYRGRAFDNDAGWRIDLQVATPGLAAR 239 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 A ++ P + SDH PV V Sbjct: 240 AQEAWVERAPSHDQRWSDHAPVTVVY 265 >gi|78047637|ref|YP_363812.1| exodeoxyribonuclease III [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325927635|ref|ZP_08188864.1| Exodeoxyribonuclease III [Xanthomonas perforans 91-118] gi|78036067|emb|CAJ23758.1| exodeoxyribonuclease III [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325542002|gb|EGD13515.1| Exodeoxyribonuclease III [Xanthomonas perforans 91-118] Length = 331 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 83/255 (32%), Positives = 137/255 (53%), Gaps = 3/255 (1%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64 +AT+NVN I +R+ +L W++ PDI+ LQE K+ FP + ++ Y + G+KS Sbjct: 7 KIATFNVNGIASRLPHLLEWLQREQPDIVGLQELKSTQAAFPEQAIRDAGYGVIWQGEKS 66 Query: 65 YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124 +NGVA+L++ + D + + LYLP+GNP K+ Sbjct: 67 WNGVALLARGTEPVEIRRGLPWDPRDTQS---RYLEAAIHGVVVACLYLPNGNPQPGPKF 123 Query: 125 DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ 184 D K++W +R +R A ++L P+ GD+N++P D Y+P W DA E R+++Q Sbjct: 124 DYKLAWFERLIRHAKTLVDLPHPVALIGDFNVVPTDADIYDPKGWRKDALLQPESREAYQ 183 Query: 185 KLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK 244 L G+TD++ A H +Y+FWDY+ +++++G+RIDH++L+ L A +D Sbjct: 184 TLLAQGWTDSLLAIHGHTPIYTFWDYFRQHFARDRGLRIDHLLLNRTLAPDLQDAGVDKW 243 Query: 245 PRGWTKPSDHTPVIV 259 R K SDH P + Sbjct: 244 VRALEKASDHAPTWI 258 >gi|291486726|dbj|BAI87801.1| multifunctional DNA-repair enzyme [Bacillus subtilis subsp. natto BEST195] Length = 252 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 75/265 (28%), Positives = 123/265 (46%), Gaps = 18/265 (6%) Query: 4 VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + +WNVN +RA + +++KE + DIICLQETK +D LQ YH+ Sbjct: 1 MKLISWNVNGLRAVMRKMDFLSYLKEEDADIICLQETKIQDGQVD---LQPEGYHVYWNY 57 Query: 62 --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G A+ SK +P++++ + ++ D + R I F I + Sbjct: 58 AVKKGYSGTAVFSKQEPLQVIYGIGLEEHDQEGRVITLEFE---NVFVITVYTPNSRRGL 114 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 Y + L L+ ++P+I GD N+ Q D NP N+A F+ + Sbjct: 115 ERIDYR---MQWEEALLSYILELDQKKPVILCGDLNVAHQEIDLKNPKANRNNAGFSDQE 171 Query: 180 RQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R++F + GF D+ R + YS+W Y A + +N G RID+ ++S + Sbjct: 172 REAFTRFLEAGFVDSFRHVYPDLEGAYSWWSYRAGARDRNIGWRIDYFVVSERLKEQIED 231 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263 A I G SDH PV + ++I Sbjct: 232 ASISADVMG----SDHCPVELIINI 252 >gi|89889637|ref|ZP_01201148.1| exodeoxyribonuclease III [Flavobacteria bacterium BBFL7] gi|89517910|gb|EAS20566.1| exodeoxyribonuclease III [Flavobacteria bacterium BBFL7] Length = 253 Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats. Identities = 76/263 (28%), Positives = 121/263 (46%), Gaps = 14/263 (5%) Query: 4 VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + ++NVN IRA + W+K NPD++CLQE K + E + Y + Sbjct: 1 MKIISYNVNGIRAAMKKDFITWLKAANPDVLCLQEIKATEDQVDTEAFKEAGYAYQYYYS 60 Query: 63 KS---YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 Y+GVAI+SK +P + + +D + R + F + I ++YLP G Sbjct: 61 AQKKGYSGVAIISKTKPDHVEYGTGIESMDFEGRNLRVDFG----DVSIMSMYLPSGTND 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K FL ++ + + LI GDYNI + D +NP ++ + F E Sbjct: 117 DRLSFKFKYME--EFLEYSKELRKERPNLIVCGDYNICHKAIDIHNPKGLKSTSGFLPEE 174 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R+ + GF D R +D YS+W Y S ++NKG R+D+ M + + T + A Sbjct: 175 REWMDRFVASGFIDTFRMFNDQPDQYSWWSYRGGSRARNKGWRLDYHMATEQMTDRIKRA 234 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 I SDH PV+V +D Sbjct: 235 VILQSA----VHSDHCPVVVEID 253 >gi|332044711|gb|EGI80905.1| exodeoxyribonuclease III Xth [Lacinutrix algicola 5H-3-7-4] Length = 253 Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 70/264 (26%), Positives = 124/264 (46%), Gaps = 15/264 (5%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + ++NVN IRA + W++ NPD++CLQE K E ++L Y Sbjct: 1 MKIISYNVNGIRAALKKGFIEWLEGANPDVLCLQEIKAMQDQVDVEAFEALGYKYHYWFS 60 Query: 62 --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GVAILSK +P + + +D + R I A F + + + + Sbjct: 61 ANKKGYSGVAILSKIKPNHVEFGTGIETMDFEGRNIRADFDG------VSVMSMYLPSGT 114 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + + K++++ + ++ E L+ GDYNI + D +NP +N + F Sbjct: 115 NMDRLEFKLNYMDEIQDYVNKLRETIPNLVICGDYNICHEAIDIHNPK-MKNVSGFLPVE 173 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R+ + G D+ R + YS+W Y A++ + NKG R+D+ M++ + A Sbjct: 174 REWIGNFIDSGLVDSYRYLNPEKVEYSWWSYRANARANNKGWRLDYAMVTQPLKQKIKRA 233 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 I T+ SDH P+++ LD+ Sbjct: 234 VILTQA----VHSDHCPILLELDM 253 >gi|319935137|ref|ZP_08009577.1| exodeoxyribonuclease III [Coprobacillus sp. 29_1] gi|319809962|gb|EFW06345.1| exodeoxyribonuclease III [Coprobacillus sp. 29_1] Length = 252 Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 68/260 (26%), Positives = 113/260 (43%), Gaps = 12/260 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + + K+ + DI +QETK + E + + + Sbjct: 1 MLFVSWNVNGLRACLKKGFEDFFKDVDADIFAIQETKLQRNQIDLE-FEGYTSYYNDAIK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+GVAI +K +P+ ++ + ++ D + R I F + Sbjct: 60 KGYSGVAIYTKKEPMNVIYGMGIEEHDQEGRLITLEFEKFYFVAVYTPNSKRELERLDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + R Q+L+ +P++ GD N+ D N +A FT + R Sbjct: 120 Q------VWEDAFRQHVQKLKESKPVVLCGDLNVAHNEIDLKNDKTNHKNAGFTDQERAK 173 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F +L N GF D R + +YS+W Y + KN G RID+ ++S + + A I Sbjct: 174 FSELLNSGFIDTFRYKYPETEMYSWWSYMFKAREKNAGWRIDYFVVSEDLKENIKDAYIY 233 Query: 243 TKPRGWTKPSDHTPVIVSLD 262 T+ G SDH PV V L+ Sbjct: 234 TEIMG----SDHCPVGVELE 249 >gi|295099755|emb|CBK88844.1| exodeoxyribonuclease III [Eubacterium cylindroides T2-87] Length = 249 Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 66/261 (25%), Positives = 113/261 (43%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN IRA + + + DI C+QETK + + L +I + + Sbjct: 1 MKLISWNVNGIRAVLNKGFIDILNTLDADIFCIQETKAQPDQIEVDCDLYLYQYINSAQR 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G I SK +P+ + + + D + R I F + G+ + Sbjct: 61 KGYSGTMIFSKIEPLSVHYGIDIPEHDTEGRVITLEF---DSYYVVTVYTPNSGDGLKRL 117 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 +Y + + ++P++ GD N+ + D NP +A FT E R S Sbjct: 118 EYRMEWDKAFSNYIQSL-----DKPVLLTGDLNVANEEIDIKNPKTNRRNAGFTDEERDS 172 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F+K D+ R + YS+W Y + KN G RID+ ++S E + ++I Sbjct: 173 FKKNLLTILKDSYRTLYPDKVEYSWWSYRFKAREKNAGWRIDYWLVSEELMPKVKDSKIL 232 Query: 243 TKPRGWTKPSDHTPVIVSLDI 263 T G SDH PV + +++ Sbjct: 233 TDIYG----SDHCPVQLEIEL 249 >gi|322434444|ref|YP_004216656.1| exodeoxyribonuclease III Xth [Acidobacterium sp. MP5ACTX9] gi|321162171|gb|ADW67876.1| exodeoxyribonuclease III Xth [Acidobacterium sp. MP5ACTX9] Length = 247 Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 99/251 (39%), Positives = 142/251 (56%), Gaps = 7/251 (2%) Query: 12 NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAIL 71 NSIRAR ++ W+ PD++ LQE K + FP E YH QK+YNGVAI+ Sbjct: 2 NSIRARAEHVKRWLAARQPDVLLLQELKGTE--FPAEWFMEQGYHSAAVTQKAYNGVAIV 59 Query: 72 SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWI 131 S+ + T L GD D ARF+EA R+ N+YLP+GNP+ + K++ K++W+ Sbjct: 60 SRTPLEVVSTTLAGDPEDSHARFLEAMIDGM----RVVNIYLPNGNPVGTPKFEYKLAWM 115 Query: 132 KRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191 R + L P + GD+N+IP+ DC+ P W +DA F E R ++ + +G+ Sbjct: 116 DRLMEQMKVWLGDGVPTVIGGDFNVIPEEIDCHKPASWVHDALFQPESRARYRGMLELGY 175 Query: 192 TDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 TDA R H ++FWDY+ ++ N+GIRIDH +L+ E L S ID PRG K Sbjct: 176 TDAFRTLHPGLGGQFTFWDYFRQAFESNRGIRIDHFLLTAEMAGRLESCEIDRGPRGEAK 235 Query: 251 PSDHTPVIVSL 261 PSDHTP++V Sbjct: 236 PSDHTPIVVRF 246 >gi|167756678|ref|ZP_02428805.1| hypothetical protein CLORAM_02216 [Clostridium ramosum DSM 1402] gi|167702853|gb|EDS17432.1| hypothetical protein CLORAM_02216 [Clostridium ramosum DSM 1402] Length = 251 Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 70/262 (26%), Positives = 112/262 (42%), Gaps = 13/262 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN IRA I +KE+ DI C+QETK ++ E Y + + + Sbjct: 1 MKLVSWNVNGIRACITKGFYDVLKESKADIFCVQETKMQEGQIELEKHGYYTY-MNSAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G + SK +P+ + ++ D + R + + + + N Sbjct: 60 KGYSGTLVFSKEKPLNYSYGIGIEEHDHEGRVVTLEYE------KFYLVNCYTPNSQNEL 113 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K D + + LE +P+I GD N+ Q D NP +A F+ E R Sbjct: 114 KRLDYRMHWEDDFLAYLKSLEKSKPVILCGDLNVAHQEIDLKNPKTNRKNAGFSDEERAK 173 Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 L GF D R + +YS+W Y ++ N G RID+ ++S + A I Sbjct: 174 MTNLLENGFIDTYRYLYPDQEGVYSWWSYRFNARKNNAGWRIDYFIVSDCLKEGIKEAFI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 T G SDH PV + +D+ Sbjct: 234 CTDILG----SDHCPVGLEIDL 251 >gi|110635562|ref|YP_675770.1| exodeoxyribonuclease III Xth [Mesorhizobium sp. BNC1] gi|110286546|gb|ABG64605.1| exodeoxyribonuclease III Xth [Chelativorans sp. BNC1] Length = 284 Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 73/264 (27%), Positives = 119/264 (45%), Gaps = 9/264 (3%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQK 63 VATWN+NS+R R+ + ++++ PD++CLQETK D FP + + Y H+E GQK Sbjct: 22 KVATWNINSVRLRLPLVLRFLEQYQPDVLCLQETKCPDDQFPTAAFRKVGYGHVEIHGQK 81 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 Y+GVA +S+ + R + ++ + + + N Y+P G + Sbjct: 82 GYHGVATISRLPLEVVERR--SFCGLTDCRHLSTLTNVDGRRVLLHNFYVPAGGDEPDPE 139 Query: 124 YDDKISWIKRF---LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K F +R L+ I GD N+ P D ++ N T Sbjct: 140 INPKFRHKLDFLQEMRDIIPTLDANTGSILVGDLNVAPLETDVWSHKQMLNVVSHTPVET 199 Query: 181 QSFQKLQNMGFTDAIRATH--DTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLH 237 + + ++ G + H L+++W Y A WS N+G R+DH+ S + L Sbjct: 200 EGLESVRKGGGWVDLMRRHIPPEEKLFTWWSYRAKDWSLSNRGRRLDHVWSSDDLAPALS 259 Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261 + RGW +PSDH PVI + Sbjct: 260 RVDVLRDARGWDRPSDHVPVIAAF 283 >gi|237733965|ref|ZP_04564446.1| conserved hypothetical protein [Mollicutes bacterium D7] gi|229383046|gb|EEO33137.1| conserved hypothetical protein [Coprobacillus sp. D7] Length = 251 Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 74/262 (28%), Positives = 118/262 (45%), Gaps = 13/262 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN IRA I +KE+ DI C+QETK ++ E Y + + + Sbjct: 1 MKLVSWNVNGIRACITKGFYDVLKESKADIFCVQETKMQEGQIELEKHGYYTY-MNSAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G + SK +P+ + ++ D + R + + + N Y P+ Sbjct: 60 KGYSGTLVFSKEKPLNYSYGIGIEEHDHEGRVVTLEYE----KFYLVNCYTPNSQNELKR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 D ++ W + FL + LE +P+I GD N+ Q D NP +A F+ E R Sbjct: 116 -LDYRMHWEEDFLAYLKS-LEKSKPVILCGDLNVAHQEIDLKNPKTNRKNAGFSDEERAK 173 Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 L GF D R + +YS+W Y ++ N G RID+ ++S + A I Sbjct: 174 MTNLLENGFIDTYRYLYPDQEGVYSWWSYRFNARKNNAGWRIDYFIVSDCLKEGIKEAFI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 T G SDH PV + +D+ Sbjct: 234 CTDILG----SDHCPVGLEIDL 251 >gi|237794818|ref|YP_002862370.1| exodeoxyribonuclease III [Clostridium botulinum Ba4 str. 657] gi|229261060|gb|ACQ52093.1| exodeoxyribonuclease III [Clostridium botulinum Ba4 str. 657] Length = 253 Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 68/262 (25%), Positives = 116/262 (44%), Gaps = 12/262 (4%) Query: 4 VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + +WNVN +RA N WI E +PDI+C+QETK ++ +Y+ Sbjct: 1 MRIYSWNVNGLRAVAKKNFIEWIGEESPDILCIQETKLQENQLEHNIKNIDSYYSYFSFA 60 Query: 62 -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GVA +K +PI + + + D + R + F + N+Y P+G Sbjct: 61 AKKGYSGVATYTKVKPISVKHSIGIEKFDSEGRILITEFK----DFTLLNIYFPNGQ-RD 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K+ + + + + ++ + L+ GDYN D NP E + F R Sbjct: 116 EERLQYKLDFYEALFNYCDELVKEGKKLVICGDYNTAHNEIDLKNPKANEKTSGFLRIER 175 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 K+ G+TD R + YS+W Y + +N G RID+ +S + + Sbjct: 176 DWLDKIIERGYTDTFRNMNPDKIKYSWWSYRFKARERNAGWRIDYHFVSNNLLDRVENTE 235 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I + G SDH P+++ L Sbjct: 236 ILNEVYG----SDHCPIMLELK 253 >gi|160879133|ref|YP_001558101.1| exodeoxyribonuclease III [Clostridium phytofermentans ISDg] gi|160427799|gb|ABX41362.1| exodeoxyribonuclease III [Clostridium phytofermentans ISDg] Length = 250 Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 68/261 (26%), Positives = 117/261 (44%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN IRA + + KE + DI C+QE+K + + + + + Sbjct: 1 MKLISWNVNGIRACVQKGFCDFFKEVDADIFCIQESKLQAGQIELD-FEGYYQYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +P+++ + ++ D + R I F ++ Sbjct: 60 KGYSGTAIFTKKEPLQVTYGMGIEEHDKEGRVITLEFEDFYMVTVYTPNSQNELARLSYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + R ++LE +P++ GD N+ + D NP + +A FT+E R Sbjct: 120 M------EWEDEFRRFLKKLEETKPVVVCGDLNVAHKEIDLKNPNTNQMNAGFTIEERTK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L GF D R + +YS+W Y + KN G RID+ + S S L SA+I Sbjct: 174 FSELLEAGFIDTFRYFYPDAMDMYSWWSYRFKAREKNTGWRIDYFLASQGLESKLVSAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 ++ G SDH P+ + + Sbjct: 234 HSQILG----SDHCPIELEIK 250 >gi|283769444|ref|ZP_06342342.1| exodeoxyribonuclease III [Bulleidia extructa W1219] gi|283103969|gb|EFC05354.1| exodeoxyribonuclease III [Bulleidia extructa W1219] Length = 251 Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 63/261 (24%), Positives = 108/261 (41%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFET-LQSLNYHIETCG 61 + +WNVN +RA + + + + D+ LQETK + E + ++ + Sbjct: 1 MKFVSWNVNGLRAVMKKGFKEFFERVDADVFALQETKMQADQITSEMEFEGYYRYMNSAE 60 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G + K +PI + + GD T + N Sbjct: 61 RKGYSGTMVYCKEEPISVQYDIEGDTSMEGRVITLEYPNYYFVTAYVPNSKEGLARLG-- 118 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + LR RL+ +P+I+ GD N+ + D NP + F+ E RQ Sbjct: 119 -----FRMEWEDRLRDHLNRLKEVKPVIYTGDLNVAHEEIDLKNPQSNHKNPGFSDEERQ 173 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +L G+ D+ R + YS+W Y A + +N G RID+ ++S + +A I Sbjct: 174 KMTELLADGYIDSFRYLYPKEVKYSWWSYRAAARERNVGWRIDYFIVSENLKEKVKNALI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 D + K SDH P+ + +D Sbjct: 234 DDEV----KGSDHCPIELEMD 250 >gi|160871859|ref|ZP_02061991.1| exodeoxyribonuclease III [Rickettsiella grylli] gi|159120658|gb|EDP45996.1| exodeoxyribonuclease III [Rickettsiella grylli] Length = 254 Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 73/262 (27%), Positives = 123/262 (46%), Gaps = 12/262 (4%) Query: 4 VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETL-QSLNYHIETCG 61 + + + NVN IR A W+K + D++CLQETK + Q + Sbjct: 1 MRIISLNVNGIRSAARKGFFEWLKHQDADVVCLQETKAQKHQLNDSVFIQGYEAYFFDAE 60 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+GVAI S+ +P + T L D + R+I+ ++ L I +LY+P G+ Sbjct: 61 KKGYSGVAIYSRLKPNNVTTGLGWACADKEGRYIQ----LHFSQLSIASLYMPSGS-SGE 115 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180 ++ K ++ +L ++ + I GD+NI +P D N + ++ F E Sbjct: 116 SRQRLKFQFLDSYLPILKKQRQQAGDFIICGDWNIAHKPIDLKNWRCNQKNSGFLPQERA 175 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 Q L +G+ DA RA + Y++W + +W N G RID+ ++S E + + SA Sbjct: 176 WLTQVLGPIGYVDAFRALNPQPDHYTWWSHRGRAWENNVGWRIDYQIVSKEIKNKIKSAM 235 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I R SDH P+I+ + Sbjct: 236 IYKDQR----FSDHAPLIIDYN 253 >gi|327313318|ref|YP_004328755.1| exodeoxyribonuclease III [Prevotella denticola F0289] gi|326944960|gb|AEA20845.1| exodeoxyribonuclease III [Prevotella denticola F0289] Length = 249 Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 67/260 (25%), Positives = 110/260 (42%), Gaps = 12/260 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + K+ + D CLQETK + + + Sbjct: 1 MKFISWNVNGLRACVGKEFEQQFKDLDADFFCLQETKMQAGQLDLS-FPGYESYWNYADK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K++P+ + + D+ D + R I + + + G Sbjct: 60 KGYSGTAIFTKHKPLNVTYGIGIDEHDHEGRVITLEMD-DFYLVTVYTPNSQDGLRRLDY 118 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + + +L+ ++P++ GD N+ Q D NP +A FT E R+ Sbjct: 119 R-----MKWEDDFQAYLHKLDEKKPVVVCGDMNVAHQEIDLKNPKTNRKNAGFTDEEREK 173 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 +L GF D R + YS+W Y + +N G RID+ ++S L A+I Sbjct: 174 MTQLLGNGFIDTFRTLYPEQVTYSWWSYRFRARERNTGWRIDYFLISERLRDRLEDAKIH 233 Query: 243 TKPRGWTKPSDHTPVIVSLD 262 T+ G SDH PV V L Sbjct: 234 TEIMG----SDHCPVEVDLK 249 >gi|282858966|ref|ZP_06268104.1| exodeoxyribonuclease III [Prevotella bivia JCVIHMP010] gi|282588246|gb|EFB93413.1| exodeoxyribonuclease III [Prevotella bivia JCVIHMP010] Length = 249 Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 68/260 (26%), Positives = 108/260 (41%), Gaps = 12/260 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + N + D CLQETK ++ + + Sbjct: 1 MKFISWNVNGLRACVGKNFKEDFAALDADFFCLQETKMQEGQLDLS-FPGYESYWNYADK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K++P+ + T + D+ D + R I + Sbjct: 60 KGYSGTAIFTKHKPLTVTTGIGIDEHDHEGRVITLEMDDFYLVTVYTPNSQDELKRLAYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + +L+ +P+I GD N+ + D NP ++A F+ E R+ Sbjct: 120 MQWETDFQAY------LHKLDEHKPVIVCGDMNVAHEEIDLKNPKTNHHNAGFSDEEREK 173 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 L N GFTD R + YS+W Y + KN G RID+ ++S L A+I Sbjct: 174 MTILLNNGFTDTFRYLYPEQVTYSWWSYRFKAREKNTGWRIDYFLISNRLRDRLKDAKIH 233 Query: 243 TKPRGWTKPSDHTPVIVSLD 262 T+ G SDH PV ++L Sbjct: 234 TEIFG----SDHCPVELTLK 249 >gi|282880102|ref|ZP_06288822.1| exodeoxyribonuclease III [Prevotella timonensis CRIS 5C-B1] gi|281305975|gb|EFA98015.1| exodeoxyribonuclease III [Prevotella timonensis CRIS 5C-B1] Length = 249 Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 69/260 (26%), Positives = 110/260 (42%), Gaps = 12/260 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + N ++ + D CLQETK ++ + + + Sbjct: 1 MKFISWNVNGLRACVKKNFQESFQQLDADFFCLQETKMQEGQLDLQ-FPGYTSYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K++PI + L ++ D + R I + Sbjct: 60 KGYSGTAIYTKHKPIHVSYGLGIEEHDQEGRVITLEMEDFFLITVYVPNSQDELKRLDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + R +L+ +P+I GD N+ + D NP + +A FT E R Sbjct: 120 M------KWEDDFRAYITQLDQIKPVIICGDLNVAHEEIDLKNPKTNKRNAGFTDEERNK 173 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 +L + GF D R + YS+W Y + KN G RID+ ++S LH A+I Sbjct: 174 MTRLLDNGFIDTFRYLYPEQITYSWWSYRFRAREKNAGWRIDYFLISERLKERLHDAKIH 233 Query: 243 TKPRGWTKPSDHTPVIVSLD 262 T+ G SDH PV + L Sbjct: 234 TEIMG----SDHCPVELELK 249 >gi|260459328|ref|ZP_05807583.1| exodeoxyribonuclease III [Mesorhizobium opportunistum WSM2075] gi|259034882|gb|EEW36138.1| exodeoxyribonuclease III [Mesorhizobium opportunistum WSM2075] Length = 281 Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 102/266 (38%), Positives = 149/266 (56%), Gaps = 8/266 (3%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ VAT+NVN + R+ L W+ E DI+CLQE KT D+ FP E +++ Y G Sbjct: 20 KMIRVATFNVNGVNGRLPVLLKWLGETQYDIVCLQELKTSDEKFPAEAIRNAGYGAIWHG 79 Query: 62 QKSYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 QKSYNGVAIL++ QP E LPGD D +R+IEA L +G LYLP+GNP Sbjct: 80 QKSYNGVAILARGKQPQERRRGLPGDVDDTHSRYIEADIDG----LVVGCLYLPNGNPAP 135 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 K+D K+ W +R + + + + GDYN++P P D P W +DA + E R Sbjct: 136 GPKFDYKLRWFERLIDYGRLLIRDSPASVLCGDYNVVPAPIDAAVPARWLSDAVYFPESR 195 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFW--DYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 Q++ ++ G+ DA+R +Y++W Y + ++ G+R+DH+++SP L Sbjct: 196 QAYAEMLAEGWIDAVRLIQPERGVYTYWNFSYRGG-YDRSSGLRMDHLLVSPSLRERLGG 254 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIP 264 A +D RGW KPSDH P + LD P Sbjct: 255 AGVDVAVRGWEKPSDHAPAWIELDWP 280 >gi|154507938|ref|ZP_02043580.1| hypothetical protein ACTODO_00424 [Actinomyces odontolyticus ATCC 17982] gi|153797572|gb|EDN79992.1| hypothetical protein ACTODO_00424 [Actinomyces odontolyticus ATCC 17982] Length = 271 Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 75/274 (27%), Positives = 123/274 (44%), Gaps = 18/274 (6%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ATWNVNSIR R+ + A+++ + D++ +QE K FP E + YH+ G Sbjct: 1 MRFATWNVNSIRTRVDRVIAFLERSGTDVLAMQEIKCRPDQFPTEAFEEAGYHVAIHGLN 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT--------------LRIG 109 +NGVA+ S+ +++ H P + +EA T + I Sbjct: 61 QWNGVAVASRLPILDVQDHFPTQPAFGEPPVVEARALGVTIDTTDTLPSEDRQASSMTIW 120 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEP-LIFAGDYNIIPQPHDCYNPII 168 +LY+P+G +T Y K+ W+ L + GD+N+ P D ++ Sbjct: 121 SLYVPNGRELTHAHYAYKLEWLANLAEQGRGWLTDPSALIALVGDWNVAPMDEDVWDMSA 180 Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 +E + R++F G+ + R + Y++WDY + KN+G+RID Sbjct: 181 FEGATHVSAPEREAFAAFAADGWVEVTR---ERVTNYTYWDYQKLRFPKNEGMRIDFAYC 237 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 SP + + A+ID R SDH PVIV +D Sbjct: 238 SPALAARVSGAQIDRDERKGKGASDHVPVIVDVD 271 >gi|319652957|ref|ZP_08007062.1| exodeoxyribonuclease III [Bacillus sp. 2_A_57_CT2] gi|317395306|gb|EFV76039.1| exodeoxyribonuclease III [Bacillus sp. 2_A_57_CT2] Length = 251 Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats. Identities = 66/262 (25%), Positives = 121/262 (46%), Gaps = 13/262 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN IRA + + KE + DI C+QE+K ++ L+ + + + Sbjct: 1 MKLVSWNVNGIRACVKKGFMDYFKEVDADIFCIQESKLQEGQIEL-ILEGYHQYWNYAIK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G A+ +K +P+ + L ++ + + R + + + N+Y P+ + Sbjct: 60 KGYSGTAVFTKKEPLSVRYGLGDNETEPEGRILTLEYEG----FYLVNVYTPN-SQRDLA 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + ++ W +R + L+ +P+I GD N+ D N ++ FT E R Sbjct: 115 RLPYRLEWEERIREYLLG-LDQIKPVIMCGDLNVAHFEIDLKNAKSNRGNSGFTDEERGK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +L GF DA R + Y++W Y A +N G RID+ ++S + + ++I Sbjct: 174 MTRLLGSGFVDAFRYKYPEAEGAYTWWSYMAKVRERNIGWRIDYFIVSEKLKERILDSQI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 G SDH PV + L+I Sbjct: 234 HCDIMG----SDHCPVALELEI 251 >gi|163787138|ref|ZP_02181585.1| exodeoxyribonuclease [Flavobacteriales bacterium ALC-1] gi|159877026|gb|EDP71083.1| exodeoxyribonuclease [Flavobacteriales bacterium ALC-1] Length = 253 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 64/263 (24%), Positives = 110/263 (41%), Gaps = 15/263 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY---HIET 59 + + ++NVN IRA I W+K +PD+ICLQE K ++ Y + + Sbjct: 1 MKIVSYNVNGIRAAINRGFIDWLKATDPDVICLQEIKAMEEQLDLSLFSDAGYGYNYWFS 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GVAIL K +P I + +D + R I + ++ L + Sbjct: 61 AQKKGYSGVAILCKSKPNHIEYGTGIESMDFEGRNIRVDYD--NVSVMSMYLPSGTNDAR 118 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K++ + L+ E+ + I + + + F E Sbjct: 119 LAHKFEY-----MDLIHEYLNNLQKEKSNLVVVGDYNICHEAIDIHNPKMKGVSGFLPEE 173 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R+ + GF D+ R H YS+W Y A+S + NKG R+D+ M S + + Sbjct: 174 REWLGNFIDSGFIDSFRYLHPKRQEYSWWSYRANSRANNKGWRLDYAMASKPLQENIKRS 233 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 I T+ SDH P+++ L+ Sbjct: 234 VILTEA----VHSDHCPILLELE 252 >gi|326798804|ref|YP_004316623.1| exodeoxyribonuclease III Xth [Sphingobacterium sp. 21] gi|326549568|gb|ADZ77953.1| exodeoxyribonuclease III Xth [Sphingobacterium sp. 21] Length = 255 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 83/263 (31%), Positives = 123/263 (46%), Gaps = 13/263 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKN-FPFETLQSLNYHIETCG 61 + + T+NVN IRA + + W+KE++ DI+CLQE K ++ L Y Sbjct: 1 MKIITYNVNGIRAAMRKDWINWLKESDADIVCLQEIKASPDQLIDLLLIEGLGYEHYWFP 60 Query: 62 --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G AIL+K P + + D + R I A F L I + Y P G+ Sbjct: 61 AEKKGYSGTAILTKRSPKHVEYGCGIEAYDKEGRIIRADFE----ELSIISAYFPSGS-S 115 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + D K ++ F R++ + L L+ +GDYNI + D +NP N + F E Sbjct: 116 GDARQDFKYQFLDDFRRYSDKLLTEFPSLVISGDYNICHRAIDIHNPKSNANSSGFLPEE 175 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R + N G+ D R H H Y++W Y A++ +KN G RID+ M S + A Sbjct: 176 RAWMESFINSGYIDTFRHLHPEPHQYTWWSYRANARAKNLGWRIDYNMASRALEGRIKQA 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 I T SDH PV + LD Sbjct: 236 AILTDAL----HSDHCPVFLELD 254 >gi|307353485|ref|YP_003894536.1| exodeoxyribonuclease III [Methanoplanus petrolearius DSM 11571] gi|307156718|gb|ADN36098.1| exodeoxyribonuclease III [Methanoplanus petrolearius DSM 11571] Length = 254 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 69/262 (26%), Positives = 117/262 (44%), Gaps = 12/262 (4%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60 + + +WNVN +RA ++ E PDI+C+QETK + Y + + Sbjct: 1 MKLVSWNVNGLRAVEKKGFLDFVNEYQPDILCVQETKAHEDQLSSSIRHPKGYFSYFSSA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+G A+ S+++P I +LD + R I A ++ + ++Y P+G Sbjct: 61 ERKGYSGTALYSRFEPESISYGFGVPELDSEGRIIIAEYS----DFNLYDIYFPNGKMSK 116 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 K+ + + LR A L+ + +I GD N + D P + F R Sbjct: 117 ER-LQFKMDFYEECLRHAVSDLDSGKNVIICGDVNTAHKEIDLARPKENSKVSGFLEIER 175 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + +L + GF D+ R YS+WD + + +N G RID+ +S + + SA Sbjct: 176 KWIDRLLDAGFKDSFRMFTSEGGYYSWWDLKSGARERNVGWRIDYFFVSDGISGRVKSAS 235 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I ++ G SDH PV + L Sbjct: 236 ILSQVEG----SDHCPVELELK 253 >gi|304320394|ref|YP_003854037.1| exodeoxyribonuclease III [Parvularcula bermudensis HTCC2503] gi|303299296|gb|ADM08895.1| exodeoxyribonuclease III [Parvularcula bermudensis HTCC2503] Length = 264 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 76/269 (28%), Positives = 118/269 (43%), Gaps = 16/269 (5%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62 + + TWN+NS+R R+ + +++ PDI+CLQETK ++ FP + + Y H GQ Sbjct: 1 MRITTWNINSVRLRLGLVERFLETVKPDILCLQETKCQNDQFPAKAFANAGYPHQAIHGQ 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 + Y+GVA LS+ EI D + + + I N Y+P G I Sbjct: 61 RGYHGVATLSRLPLHEITRRQYCGKDDARHIAVTLEEG-----IVIHNFYVPAGGDIPDP 115 Query: 123 KYDDKISWIKRFLRFASQRLE--LEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + ++K RF+ + ++P I GD NI P +D ++ T Sbjct: 116 EQNEKFDHKLRFVDEMREVFTGLGDQPHILVGDLNIAPHENDVWSHKQLLKVVSHTPPET 175 Query: 181 QSFQKLQNM--GFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLL- 236 + L T D LY++W Y + W K N+G R+DHI +SP Sbjct: 176 ERLAALMEAAPFIDVMRELTADEQKLYTWWSYRSKDWRKSNRGRRLDHIWVSPALKDRAL 235 Query: 237 ----HSARIDTKPRGWTKPSDHTPVIVSL 261 + + RGW +PSDH PV + L Sbjct: 236 AKGRRAFTVHDDVRGWDRPSDHAPVTLDL 264 >gi|291522762|emb|CBK81055.1| exodeoxyribonuclease III [Coprococcus catus GD/7] Length = 258 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 66/261 (25%), Positives = 107/261 (40%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 V + +WNVN +RA + E + DI CLQETK + + L + + Sbjct: 8 VKLISWNVNGLRAVVGKGFVDIFNELDADIFCLQETKLQAGQIELD-LPGYEQYWNYAER 66 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G A+ ++ +P+ + + + D + R I + + + N Sbjct: 67 KGYSGTAVFTRIKPLSVRYGMDIAEHDTEGRVITLEYD------SFYLVNVYTPNSKDGL 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + R + LE +P++ GD N+ + D NP +A F+ E R Sbjct: 121 ARLPYRMKWEDDFRNYLKTLEQTKPVVMCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAK 180 Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +L GF D R + YS+W Y ++ N G RID+ ++S L SA I Sbjct: 181 MTELLAAGFIDTFRYFYPDKTGEYSWWSYRFNARKNNAGWRIDYFIVSDALKERLISASI 240 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 + G SDH PV + L Sbjct: 241 HQEIFG----SDHCPVELELK 257 >gi|90422719|ref|YP_531089.1| exodeoxyribonuclease III (xth) [Rhodopseudomonas palustris BisB18] gi|90104733|gb|ABD86770.1| Exodeoxyribonuclease III [Rhodopseudomonas palustris BisB18] Length = 256 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 86/259 (33%), Positives = 134/259 (51%), Gaps = 3/259 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + VAT+N+N++ R+ NL W+K+ PD++CLQE K D FP + Y G+ Sbjct: 1 MKVATFNINNVNRRLENLLHWLKQARPDVVCLQELKCRDAEFPARAIARAGYQAVWQGEN 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 ++NGVAILS+ + ++ + +G LYLP+GNP K Sbjct: 61 TWNGVAILSRGGAPIVT---QTRLPGDRSDLQSRYIEAAIDGIVVGCLYLPNGNPQPGPK 117 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 +D K++W KR A + L + P++ AGD+N+ P D Y W++DA R +F Sbjct: 118 FDYKLAWFKRLAGHARKLLRQDVPVVLAGDFNVAPTALDIYPTRSWDHDALVQPASRAAF 177 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +L G+TDA+R H +Y+FW Y + ++ G+R+DH++LSP+ L A +D Sbjct: 178 ARLVKQGWTDALRELHPDRRIYTFWHYMRQRYERDAGLRLDHLLLSPQLAPRLRQAGVDR 237 Query: 244 KPRGWTKPSDHTPVIVSLD 262 RG SDH P + L Sbjct: 238 AVRGRPGASDHAPTWIVLK 256 >gi|317496610|ref|ZP_07954957.1| exodeoxyribonuclease III [Gemella moribillum M424] gi|316913275|gb|EFV34774.1| exodeoxyribonuclease III [Gemella moribillum M424] Length = 254 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 69/261 (26%), Positives = 112/261 (42%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + ++NVN +RA + N K+ + D CLQETK ++ + + + Sbjct: 1 MKCISFNVNGLRAIVNKNFEEDFKKLDADFFCLQETKMQEGQLDLQ-FDGYYSYFNYAER 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K++P+ + + D+ D + R I + + I G+ + Sbjct: 60 KGYSGTAIYTKHKPLNVNYGIGIDEHDTEGRVITLEY---DKFFFITVYTPNSGSELKRL 116 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 Y + + L + ++ GD N+ D NP +A FT E R+ Sbjct: 117 DYR---MTWEEDFKNYLLELNKTKGVVVCGDLNVAHTEIDLKNPKSNTKNAGFTPEEREK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F KL + GF D R + YS+W Y ++ N G RID+ + S + L SA+I Sbjct: 174 FTKLLDAGFIDTFRYFNPELTGAYSWWSYRFNARKNNAGWRIDYFLTSRDLEKYLVSAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 G SDH PV V L+ Sbjct: 234 HNDILG----SDHCPVEVVLN 250 >gi|315925763|ref|ZP_07921970.1| exodeoxyribonuclease III [Pseudoramibacter alactolyticus ATCC 23263] gi|315620872|gb|EFV00846.1| exodeoxyribonuclease III [Pseudoramibacter alactolyticus ATCC 23263] Length = 254 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 69/263 (26%), Positives = 110/263 (41%), Gaps = 12/263 (4%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + +WNVN IRA W++ PD++ +QE K E YH+ Sbjct: 1 MKLYSWNVNGIRAAEKKGFVDWLQREQPDVLGIQELKAEPDQLSDALKDVEGYHVFFNPA 60 Query: 62 -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+G A+ K +P I+T L + + + R T + + N+Y P+G+ Sbjct: 61 ERKGYSGTAVYYKREPKRILTGLSDERFNHEGR----TIILEYPDFTLYNIYFPNGSQSD 116 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 K+ + F +R+ E +I GD N + D NP + F R Sbjct: 117 ER-LQFKMDFYDGFWHDVDERVARGEKVIICGDVNTAHREIDLKNPKSNAKRSGFLPIER 175 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + G+ D R + YS+W Y ++ N G RID+ S A LL A Sbjct: 176 EWMDHFFAGGYIDTYRYFYPEQVTYSWWSYRFNARKNNAGWRIDYFFASDNAKDLLADAA 235 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263 I T G SDH P+ ++L++ Sbjct: 236 IHTDVTG----SDHCPISLTLNL 254 >gi|293376523|ref|ZP_06622751.1| exodeoxyribonuclease III [Turicibacter sanguinis PC909] gi|292644749|gb|EFF62831.1| exodeoxyribonuclease III [Turicibacter sanguinis PC909] Length = 251 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 77/261 (29%), Positives = 124/261 (47%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + +++ PD +C+QETK ++ + L + + Sbjct: 1 MKFISWNVNGLRACVKKGFLDFVEAEQPDFLCVQETKLQEGQIDLQ-LDGYYQYWNYAVK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K++P+++ L + D + R I + + +Y P+ + Sbjct: 60 KGYSGTAIFTKHEPLQVTYGLNIAEHDQEGRVITLEY----NDFYLVTVYTPNSQNELAR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 D +++W + F R L++ +P+I GD N+ Q D NP +A FT+E R Sbjct: 116 -LDYRLTWEEAF-RNYLIGLDVLKPVIVCGDLNVAHQQIDLKNPKTNTKNAGFTIEERNE 173 Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 KL N GF D R + + YS+W Y A + +KN G RID+ + S S L ARI Sbjct: 174 MTKLLNSGFIDTFRYFYPTKENCYSWWSYRAGARAKNVGWRIDYFITSKALESRLEDARI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 G SDH PV + L Sbjct: 234 YPDVLG----SDHCPVGLQLK 250 >gi|153815015|ref|ZP_01967683.1| hypothetical protein RUMTOR_01232 [Ruminococcus torques ATCC 27756] gi|145847583|gb|EDK24501.1| hypothetical protein RUMTOR_01232 [Ruminococcus torques ATCC 27756] Length = 252 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 68/262 (25%), Positives = 115/262 (43%), Gaps = 13/262 (4%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ +WNVN IRA + + E + DI C+QE+K ++ + L + + Sbjct: 2 IMKFVSWNVNGIRACVQKGFLDFFTEADADIFCIQESKMQEGQLELD-LPGYHQYWNYAV 60 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G A+ +K +P+ + + ++ D + R I F + Sbjct: 61 KKGYSGTAVFTKKEPLSVTYGIGIEEHDQEGRVITCEFEDFYFVTVYTPNSQNELARLDY 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + R ++LE ++P+I GD N+ + D NP +A FT E R Sbjct: 121 RM------RWEDDFRMYLKKLEEKKPVIVTGDMNVAHKEIDLKNPKTNRKNAGFTDEERG 174 Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 F +L + GF D R + +YS+W Y + +KN G RID+ +S L A+ Sbjct: 175 KFTELLDAGFIDTFRYFYPDREGIYSWWSYRFSARAKNAGWRIDYFCVSESLKERLKDAK 234 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I T G SDH P+ + +D Sbjct: 235 ILTDVMG----SDHCPIELDMD 252 >gi|320533420|ref|ZP_08034105.1| putative exodeoxyribonuclease III [Actinomyces sp. oral taxon 171 str. F0337] gi|320134357|gb|EFW26620.1| putative exodeoxyribonuclease III [Actinomyces sp. oral taxon 171 str. F0337] Length = 269 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 74/272 (27%), Positives = 125/272 (45%), Gaps = 16/272 (5%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSIR R+ + A+++ + D + +QE K FP E ++ Y + G Sbjct: 1 MRLATWNVNSIRTRVDRVLAFLEREDIDALAMQEIKCRPDQFPVEPFEAAGYELAIHGLN 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-----------TQTLRIGNLY 112 +NGVAI S+ ++ T P + + +R+ +LY Sbjct: 61 QWNGVAIASRVGLGDVATSFPEQPAWASKPEAKPVVEARALGATVGTASDAKPVRLWSLY 120 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWE 170 +P+G +T + Y K+ W++ + LE E L GD+N+ P+ D ++ ++E Sbjct: 121 VPNGRELTHSHYTYKLDWLRVLRDDVAAWLEEEPDLPLALVGDWNVAPRDEDVWDMSVFE 180 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230 + R++F G + R + Y++WDY + +N+G+RID + SP Sbjct: 181 GATHVSSPEREAFAAFAEAGMREVTR---ERVTNYTYWDYQKLRFPRNEGMRIDFVYASP 237 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + A ID R SDH PVIV +D Sbjct: 238 ALAGRVTGAAIDRDERKGKGASDHVPVIVEVD 269 >gi|288920812|ref|ZP_06415110.1| exodeoxyribonuclease III Xth [Frankia sp. EUN1f] gi|288347771|gb|EFC82050.1| exodeoxyribonuclease III Xth [Frankia sp. EUN1f] Length = 296 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 79/262 (30%), Positives = 122/262 (46%), Gaps = 6/262 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFP---FETLQSLNYHIETC 60 + +ATWN+NS +AR L W+ +PD++CLQETK D F E L Y + Sbjct: 1 MRIATWNINSAKARQSRLIEWLDRASPDVVCLQETKLADDAFLELFDEDLFRRGYRVAHH 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 G +NGVAILS+ ++ LPGD + T +R+ +LY+P+G + Sbjct: 61 GDGRWNGVAILSRAGLDDVQRGLPGDPGFPKPEPRAIAATCGG--IRVWSLYVPNGRTVD 118 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 Y K++W+ + + GD+NI P D ++ +E T R Sbjct: 119 DPHYAYKLAWLAALRDVVGELAPAGPVM-TLGDFNIAPTDADVWDIAAFEGATHVTEAER 177 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + +L G D +RA +Y++WDY + KN G+RID + + + + Sbjct: 178 AALGELHGAGLVDLMRARWPEETVYTYWDYRQLCFPKNYGMRIDLALATADVAGRTRAVW 237 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 +D R T SDH PV+V LD Sbjct: 238 VDRAARKGTGTSDHAPVVVDLD 259 >gi|293188973|ref|ZP_06607706.1| exodeoxyribonuclease III [Actinomyces odontolyticus F0309] gi|292822075|gb|EFF81001.1| exodeoxyribonuclease III [Actinomyces odontolyticus F0309] Length = 271 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 75/274 (27%), Positives = 123/274 (44%), Gaps = 18/274 (6%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ATWNVNSIR R+ + A+++ + D++ +QE K FP E + YH+ G Sbjct: 1 MRFATWNVNSIRTRVDRVIAFLERSGTDVLAMQEIKCRPDQFPTEAFEEAGYHVAIHGLN 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT--------------LRIG 109 +NGVA+ S+ +++ H P + +EA T + I Sbjct: 61 QWNGVAVASRLPILDVQDHFPTQPAFGEPPVVEARALGVTIDTTNTLPSEDRQASSMTIW 120 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEP-LIFAGDYNIIPQPHDCYNPII 168 +LY+P+G +T Y K+ W+ L + GD+N+ P D ++ Sbjct: 121 SLYVPNGRELTHAHYAYKLEWLANLAEQGRGWLTDPSALIALVGDWNVAPLDEDVWDMSA 180 Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 +E + R++F G+ + R + Y++WDY + KN+G+RID Sbjct: 181 FEGATHVSAPEREAFAAFAADGWVEVTR---ERVTNYTYWDYQKLRFPKNEGMRIDFAYC 237 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 SP + + A+ID R SDH PVIV +D Sbjct: 238 SPALAARVSGAQIDRDERKGKGASDHVPVIVDVD 271 >gi|325673954|ref|ZP_08153644.1| exodeoxyribonuclease III [Rhodococcus equi ATCC 33707] gi|325555219|gb|EGD24891.1| exodeoxyribonuclease III [Rhodococcus equi ATCC 33707] Length = 259 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 72/257 (28%), Positives = 119/257 (46%), Gaps = 7/257 (2%) Query: 12 NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAIL 71 NS+RAR + W+ + D++ +QETK +D+ FP+E Y + G +NGVAI Sbjct: 2 NSVRARTDRIVDWLARTDTDVLAMQETKCKDEQFPYERFTEAGYEVAHVGLSQWNGVAIA 61 Query: 72 SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT-----LRIGNLYLPHGNPITSTKYDD 126 S+ ++ + EAT +R+ +LY+P+G +T Y Sbjct: 62 SRIGLEDVQVGFADQPGFNKDPEAEATREARAIGATVGGVRVWSLYVPNGRELTDPHYVY 121 Query: 127 KISWIKRFLRFASQRL--ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ 184 K+ W+ + A L + + GD+N+ P D ++P +E + R +F Sbjct: 122 KLEWLAKLRADAEGWLAGNPDAQIALVGDWNVAPTDEDVWDPAFFEGKTHTSQPERDAFD 181 Query: 185 KLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK 244 GF D +R +Y++WDY + K +G+RID+++ SP + + A ID Sbjct: 182 AFAEAGFADVVRPHAPGPGVYTYWDYTQLRFPKRQGMRIDYVLGSPAFAARVTGAHIDRD 241 Query: 245 PRGWTKPSDHTPVIVSL 261 R SDH PV+V L Sbjct: 242 ERKGKGASDHAPVVVDL 258 >gi|223935760|ref|ZP_03627676.1| exodeoxyribonuclease III Xth [bacterium Ellin514] gi|223895768|gb|EEF62213.1| exodeoxyribonuclease III Xth [bacterium Ellin514] Length = 250 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 71/259 (27%), Positives = 114/259 (44%), Gaps = 11/259 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + N ++ + +PDI+CLQETK + + + T + Sbjct: 1 MKLISWNVNGLRAVLKKNFLDFLAKEDPDILCLQETKCTPDDVEQLWPATFTTYWNTAQK 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +PI + + + D++ R + + + + T Sbjct: 61 KGYSGTAIFTKAKPISVSLGINCPEHDMEGRVLTSEYPEF-----FLVNVYVPNSKRELT 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + W FL + + LE ++P+IF GD N+ D NP + FT E R Sbjct: 116 RLAYRQQWDCDFLSYLKK-LEKKKPVIFCGDLNVAHTEIDLANPKANVKNHGFTPEERAG 174 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F + GF D R YS+W + S+N G RID+ ++S L A I Sbjct: 175 FSTVIKAGFIDTFREFEKGGGHYSWWSPMGGARSRNVGWRIDYFLISSALRPRLKRAFIQ 234 Query: 243 TKPRGWTKPSDHTPVIVSL 261 G SDH PV + L Sbjct: 235 PNIPG----SDHCPVGIEL 249 >gi|239941948|ref|ZP_04693885.1| putative exodeoxyribonuclease [Streptomyces roseosporus NRRL 15998] gi|239988412|ref|ZP_04709076.1| putative exodeoxyribonuclease [Streptomyces roseosporus NRRL 11379] gi|291445398|ref|ZP_06584788.1| exodeoxyribonuclease [Streptomyces roseosporus NRRL 15998] gi|291348345|gb|EFE75249.1| exodeoxyribonuclease [Streptomyces roseosporus NRRL 15998] Length = 271 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 59/270 (21%), Positives = 103/270 (38%), Gaps = 10/270 (3%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++TV + NVN +RA W+ D++CLQE + E P E +H Sbjct: 1 MLTVTSVNVNGLRAAAKKGFVEWLAATEADVVCLQEVRAELAQLPEEVGAPEGWHTVHAP 60 Query: 62 Q--KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIE--ATFTINTQTLRIGNLYLPHGN 117 K GV++ S++ P + G + F I+ + + +LYLP G Sbjct: 61 AAAKGRAGVSVYSRHAPERVQIGFGGHGVPGAEEFDTSGRYAEIDLPGVTVASLYLPSGE 120 Query: 118 PITSTKYD---DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 T + + +++ ++ ++ GD+NI Q D N + Sbjct: 121 VGTERQDEKERFMAAFLPYLQGLKARAAADGREVVVCGDWNIAHQEADLKNWKANRKSSG 180 Query: 175 FTLEVRQSFQKLQNMGFTDAIRA--THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 F E R ++ + + D YS+W Y ++ + G RID+ M +P Sbjct: 181 FLPEERAWLTRVLDEAAYVDVVRALHPDVEGPYSWWSYRGRAFDNDTGWRIDYQMATPGL 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 A ++ + SDH PV V + Sbjct: 241 AGRAVKAWVERAATHAERWSDHAPVTVVYE 270 >gi|317501545|ref|ZP_07959741.1| exodeoxyribonuclease III Xth [Lachnospiraceae bacterium 8_1_57FAA] gi|331088593|ref|ZP_08337504.1| exodeoxyribonuclease [Lachnospiraceae bacterium 3_1_46FAA] gi|316897056|gb|EFV19131.1| exodeoxyribonuclease III Xth [Lachnospiraceae bacterium 8_1_57FAA] gi|330407550|gb|EGG87050.1| exodeoxyribonuclease [Lachnospiraceae bacterium 3_1_46FAA] Length = 250 Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats. Identities = 68/261 (26%), Positives = 114/261 (43%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN IRA + + E + DI C+QE+K ++ + L + + + Sbjct: 1 MKFVSWNVNGIRACVQKGFLDFFTEADADIFCIQESKMQEGQLELD-LPGYHQYWNYAVK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G A+ +K +P+ + + ++ D + R I F + Sbjct: 60 KGYSGTAVFTKKEPLSVTYGIGIEEHDQEGRVITCEFEDFYFVTVYTPNSQNELARLDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + R ++LE ++P+I GD N+ + D NP +A FT E R Sbjct: 120 M------RWEDDFRMYLKKLEEKKPVIVTGDMNVAHKEIDLKNPKTNRKNAGFTDEERGK 173 Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L + GF D R + +YS+W Y + +KN G RID+ +S L A+I Sbjct: 174 FTELLDAGFIDTFRYFYPDREGIYSWWSYRFSARAKNAGWRIDYFCVSESLKERLKDAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 T G SDH P+ + +D Sbjct: 234 LTDVMG----SDHCPIELDMD 250 >gi|157964825|ref|YP_001499649.1| exodeoxyribonuclease III [Rickettsia massiliae MTU5] gi|157844601|gb|ABV85102.1| Exodeoxyribonuclease III [Rickettsia massiliae MTU5] Length = 268 Score = 186 bits (473), Expect = 3e-45, Method: Composition-based stats. Identities = 96/259 (37%), Positives = 142/259 (54%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+NSI+ R++ L ++ + PDI+ LQE K E FPF+ L L Y+ GQK Sbjct: 9 MKIATWNINSIKTRLNLLRNFLSKETPDILLLQEIKCETAKFPFDALSDLPYNSYVHGQK 68 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 SYNGVAI+SK+ EI+ P + QARF+E ++ I +LY P+G+ + S K Sbjct: 69 SYNGVAIISKFPADEIIKDFPNNYCSDQARFLEIKLSLPIGFCNIISLYAPNGSFVGSDK 128 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+++ F+ + S + +E I GD+NI P D Y+P + CFT ++ Sbjct: 129 FVAKLAFYDNFINYLSTKKSFDEKTIIGGDFNIAPFDIDVYSPKLLAETTCFTEVEQKKL 188 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + + N GF D R H +S+WDY A + +NKG+RID I+ L + +D Sbjct: 189 RTILNSGFEDLYRLMHPNKQEFSWWDYRAGCFEQNKGMRIDMILGCNNTIDYLENCYMDY 248 Query: 244 KPRGWTKPSDHTPVIVSLD 262 R KPSDH PVI S Sbjct: 249 NLRTQEKPSDHIPVIASFK 267 >gi|88607141|ref|YP_505100.1| exodeoxyribonuclease III [Anaplasma phagocytophilum HZ] gi|88598204|gb|ABD43674.1| exodeoxyribonuclease III [Anaplasma phagocytophilum HZ] Length = 273 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 83/273 (30%), Positives = 140/273 (51%), Gaps = 12/273 (4%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 ++ V TWNVNSIR RI +L + + E++ D+ LQE K ++ FPF L++L Y GQ Sbjct: 1 MIRVITWNVNSIRKRIEHLCSVLSEHSIDVAMLQEIKCTNEQFPFVELEALGYKCYVHGQ 60 Query: 63 KSYNGVAILSKYQPIEIVTHLP-----------GDDLDVQARFIEATFTINTQTLRIGNL 111 KS NGVAI+SK +E+V++ + + +R+ ++ Sbjct: 61 KSRNGVAIISKLPVVEVVSYSVLDEGKELESAGSYSSEESRYIECTLECTGNKKIRVVSV 120 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 Y+P+G + S + K+ +++ ++ E+ LI GD+N+ P+ D ++P + Sbjct: 121 YVPNGQEVESETFFYKLKFLEHLKDRLLNIMKTEDFLIAGGDFNVAPEEIDVHDPKALDG 180 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSP 230 CF + R F+++ N G D R +S+W+Y W N+G+RID ++ SP Sbjct: 181 RLCFHILERAKFREILNNGIVDIFRTFVGIDRKEFSWWNYREGGWQNNRGLRIDALLSSP 240 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + + I +K RGW PSDH PV+ +D+ Sbjct: 241 QIADKVLDCSILSKVRGWDTPSDHAPVMGDIDV 273 >gi|294499447|ref|YP_003563147.1| exodeoxyribonuclease III [Bacillus megaterium QM B1551] gi|294349384|gb|ADE69713.1| exodeoxyribonuclease III [Bacillus megaterium QM B1551] Length = 253 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 60/263 (22%), Positives = 109/263 (41%), Gaps = 14/263 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN IRA + + +E N D+ C+QETK ++ + L+ + + Sbjct: 1 MKLISWNVNGIRACVRKGFLDYFQEVNADVFCIQETKLQEGQIDLQ-LEGYYQYWNYAVK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G A+ +K +P+ + + + D + N Sbjct: 60 KGYSGTAVFTKQKPLSVSYGVGKESEDEGRIITLEFEQCYVVNVYTPNSKRDLARLEERL 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 +++ L ++L + +I GD N+ D NP ++ FT+E R Sbjct: 120 QWE-------DDLLVYLKKLNSRKAVILCGDLNVAHAEIDLRNPKPNRGNSGFTIEERGK 172 Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 L GF D R + Y++W Y +N G RID+ ++S +++ + I Sbjct: 173 MTTLLASGFLDTFRYLYPNQEGAYTWWSYMNKVRERNIGWRIDYFIVSERMKNVIQESAI 232 Query: 242 DTKPRGWTKPSDHTPVIVSLDIP 264 G SDH PV++ L++P Sbjct: 233 HPHVMG----SDHCPVMLELNVP 251 >gi|16081140|ref|NP_391968.1| apurinic/apyrimidinic endonuclease [Bacillus subtilis subsp. subtilis str. 168] gi|221312070|ref|ZP_03593917.1| multifunctional DNA-repair enzyme [Bacillus subtilis subsp. subtilis str. 168] gi|221316395|ref|ZP_03598200.1| multifunctional DNA-repair enzyme [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221321308|ref|ZP_03602602.1| multifunctional DNA-repair enzyme [Bacillus subtilis subsp. subtilis str. JH642] gi|221325591|ref|ZP_03606885.1| multifunctional DNA-repair enzyme [Bacillus subtilis subsp. subtilis str. SMY] gi|585113|sp|P37454|EXOA_BACSU RecName: Full=Exodeoxyribonuclease gi|467372|dbj|BAA05218.1| 3'-exo-deoxyribonuclease [Bacillus subtilis] gi|2636635|emb|CAB16125.1| apurinic/apyrimidinic endonuclease [Bacillus subtilis subsp. subtilis str. 168] Length = 252 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 70/263 (26%), Positives = 120/263 (45%), Gaps = 14/263 (5%) Query: 4 VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + +WNVN +RA + +++KE + DIICLQETK +D + + + + Sbjct: 1 MKLISWNVNGLRAVMRKMDFLSYLKEEDADIICLQETKIQDGQVDLQP-EDYHVYWNYAV 59 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G A+ SK +P++++ + ++ D + R I F I Sbjct: 60 KKGYSGTAVFSKQEPLQVIYGIGVEEHDQEGRVITLEFENVFVMTVYTPNSRRGLERIDY 119 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + L L+ ++P+I GD N+ Q D NP N+A F+ + R+ Sbjct: 120 RMQ------WEEALLSYILELDQKKPVILCGDLNVAHQEIDLKNPKANRNNAGFSDQERE 173 Query: 182 SFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 +F + GF D+ R + YS+W Y A + +N G RID+ ++S + A Sbjct: 174 AFTRFLEAGFVDSFRHVYPDLEGAYSWWSYRAGARDRNIGWRIDYFVVSESLKEQIEDAS 233 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263 I G SDH PV + ++I Sbjct: 234 ISADVMG----SDHCPVELIINI 252 >gi|311743284|ref|ZP_07717091.1| exodeoxyribonuclease III [Aeromicrobium marinum DSM 15272] gi|311313352|gb|EFQ83262.1| exodeoxyribonuclease III [Aeromicrobium marinum DSM 15272] Length = 254 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 67/252 (26%), Positives = 121/252 (48%), Gaps = 2/252 (0%) Query: 12 NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAIL 71 NSIR+RI + +++ ++ D++ +QETK + FP L +L Y G +NGVAI+ Sbjct: 2 NSIRSRIDRVVGFLERHDVDVLAIQETKCREDQFPGLELSALGYEYAHAGLNQWNGVAIV 61 Query: 72 SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWI 131 S+ ++ T D + +R+ +LY+P+G + Y K++W+ Sbjct: 62 SRVGLDDVATTFADDQPTFADVLEPRSIGATCGGVRVWSLYVPNGRELDHDHYVYKLAWL 121 Query: 132 KRFLRFASQRL--ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNM 189 R + L + + + GD+N+ PQ D ++ + + R +F+ + + Sbjct: 122 DRLREAGQEWLAADPDAQIALTGDWNVAPQDEDVWDMAAFAGSTHVSEPERAAFRAVVDA 181 Query: 190 GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT 249 G+ D +R +Y+FWDY + K +G+RID + SP + + ID + R Sbjct: 182 GYADVVRPHTPGPGVYTFWDYQQLRFPKREGMRIDFQLCSPALAARVEKGWIDREERKGK 241 Query: 250 KPSDHTPVIVSL 261 SDH PV++ L Sbjct: 242 GASDHAPVVIDL 253 >gi|167759302|ref|ZP_02431429.1| hypothetical protein CLOSCI_01649 [Clostridium scindens ATCC 35704] gi|167663176|gb|EDS07306.1| hypothetical protein CLOSCI_01649 [Clostridium scindens ATCC 35704] Length = 250 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 70/259 (27%), Positives = 112/259 (43%), Gaps = 13/259 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN IRA + + +E + DI C+QE+K ++ ET + + + Sbjct: 1 MKFVSWNVNGIRACVQKGFMEFFQEADADIFCIQESKMQEGQLELET-PGYHQYWNYAKK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +PI + + ++ D + R I F + Sbjct: 60 KGYSGTAIFTKQEPISVSYGIGIEEHDQEGRVITLEFEDYYFITVYTPNSQNELARLPYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + ++LE +P+IF GD N+ + D NP +A FT E R Sbjct: 120 MQ------WEDDFLAYLKKLEEAKPVIFCGDLNVAHKEIDLKNPKTNRKNAGFTDEERAK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F L + GF D R + +YS+W Y + +KN G RID+ +S L A+I Sbjct: 174 FTSLVDAGFIDTFRYFYPDAQGIYSWWSYRFSARAKNAGWRIDYFCVSESLEERLVDAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVS 260 T G SDH P+++ Sbjct: 234 LTDVMG----SDHCPIVLE 248 >gi|153853826|ref|ZP_01995182.1| hypothetical protein DORLON_01173 [Dorea longicatena DSM 13814] gi|149753576|gb|EDM63507.1| hypothetical protein DORLON_01173 [Dorea longicatena DSM 13814] Length = 250 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 70/261 (26%), Positives = 109/261 (41%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN IRA E + DI C+QE+K + +T + + + Sbjct: 1 MKFISWNVNGIRACAQKGFMDIFNEADADIFCIQESKMQAGQLELDT-PGYHQYWNYAER 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +P+ + L ++ D + R I F + Sbjct: 60 KGYSGTAIFTKEEPLSVSYGLGIEEHDKEGRVITLEFEDFYFITVYTPNSQSELARLDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + ++LE ++P+IF GD N+ + D NP +A FT E R Sbjct: 120 M------RWEDAFLAYLKKLEEKKPVIFCGDLNVAHKEIDLKNPKTNRKNAGFTDEERGK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F L N GF D R + +YS+W Y + KN G RID+ +S + A+I Sbjct: 174 FTNLLNAGFIDTFRYFYPDAEGIYSWWSYRFSARKKNAGWRIDYFCVSESLKDRIKDAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 T+ G SDH PV + + Sbjct: 234 LTEIMG----SDHCPVELDFE 250 >gi|149200232|ref|ZP_01877254.1| exodeoxyribonuclease (ExoA) [Lentisphaera araneosa HTCC2155] gi|149136674|gb|EDM25105.1| exodeoxyribonuclease (ExoA) [Lentisphaera araneosa HTCC2155] Length = 258 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 71/265 (26%), Positives = 117/265 (44%), Gaps = 14/265 (5%) Query: 1 MSVVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HI 57 MSV + +WNVN IRA ++ + D+ICLQETK + E + NY + Sbjct: 1 MSV-KLISWNVNGIRAVEKKGFVDLMQSWDADVICLQETKAHKEQLSDELINIGNYTSYW 59 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 + +K Y+ VAI S+ +PI ++ L ++ D + R I A ++ + +Y P+ Sbjct: 60 HSGEKKGYSSVAIYSRIEPIRVIEGLGIEEFDREGRVIIAEYS----DFYLFGVYFPNAQ 115 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 D L + ++ + GD+N+ + D NP E + +++ Sbjct: 116 AELKRI--DYRLEFGDALIEQLKEKYSDKACVLCGDFNVAHKAIDLKNPKANEKNPGYSI 173 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 + R K G D R + YS+W Y + S+N G RID+ +S A + Sbjct: 174 QERNWMDKFLAAGHVDTFRMFNQNPDEYSWWSYRGGARSRNVGWRIDYFCVSESARDRVL 233 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLD 262 A I + G SDH PV + L+ Sbjct: 234 DAGIMQEVLG----SDHCPVSIELE 254 >gi|297570792|ref|YP_003696566.1| exodeoxyribonuclease III Xth [Arcanobacterium haemolyticum DSM 20595] gi|296931139|gb|ADH91947.1| exodeoxyribonuclease III Xth [Arcanobacterium haemolyticum DSM 20595] Length = 269 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 72/272 (26%), Positives = 123/272 (45%), Gaps = 16/272 (5%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+NS RAR + + ++ D + LQE K + + FP +++ Y + G Sbjct: 1 MKIATWNINSARARADRILDVLTRHDLDALALQEIKCKPEQFPAADIEAAGYEVAAHGLN 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ-----------TLRIGNLY 112 +NGVAI+S+ ++ PG V+ I + + +LY Sbjct: 61 QWNGVAIISRVGLEDVRREFPGQPGFVKGEPEGGRSFIPGPAEARAIGARVGGIDLWSLY 120 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEE--PLIFAGDYNIIPQPHDCYNPIIWE 170 +P+G Y K+ +++R FA ++ ++ L GD+N+IP D ++P E Sbjct: 121 VPNGRATGDPHYHYKLEFLRRLRDFAEGQMRDDDAAQLALVGDWNVIPTDADVWDPAAME 180 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230 + T R +F + G + + Y+FWDY + KN+G+RID++ SP Sbjct: 181 DGIYLTEPERAAFHAFADAGMVEL---SRQYATNYTFWDYQKLRFPKNEGMRIDYVYASP 237 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + ID R SDH PVI+ + Sbjct: 238 ALAARSIDGTIDRDERKGKGASDHVPVIIEFE 269 >gi|203287972|ref|YP_002222987.1| exodeoxyribonuclease III [Borrelia recurrentis A1] gi|201085192|gb|ACH94766.1| exodeoxyribonuclease III [Borrelia recurrentis A1] Length = 254 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 63/261 (24%), Positives = 101/261 (38%), Gaps = 9/261 (3%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ + +WNVN IRA +I E +PDI+CLQETK + P E + Y+ Sbjct: 1 MMNLISWNVNGIRAVSNKGFLNFIAEYSPDILCLQETKALKEQLPRELIDIEGYYSYFSK 60 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 + + I ++ + E I I + Sbjct: 61 SIIKGYSGVAIYSKIEPIKLENMNIEIFDR----EGRCIIAHYHDFILINAYFPNSQSLR 116 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + + K+ ++ F A+ + + LI GD+NI D NP A F +E Sbjct: 117 KRLNYKLEFLMSFESIANSFVTSGKNLIVCGDFNIAHTEIDLSNPKTSRESAGFYVEETN 176 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 N G+ D R + Y++WDY + +N G RID+ +++ + A I Sbjct: 177 WMDNFLNRGYVDTFRMFNKEPGNYTWWDYKTRARERNVGWRIDYFVINKAFQFKVKDALI 236 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 K G SDH PV + L Sbjct: 237 LNKVMG----SDHCPVFLKLK 253 >gi|323358249|ref|YP_004224645.1| exonuclease III [Microbacterium testaceum StLB037] gi|323274620|dbj|BAJ74765.1| exonuclease III [Microbacterium testaceum StLB037] Length = 281 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 73/267 (27%), Positives = 120/267 (44%), Gaps = 11/267 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSIRAR+ + + D++ +QE K + + FP+ + YH+ G Sbjct: 1 MRLATWNVNSIRARVTRTVEFCVREHIDVLAMQEIKCKTEQFPYAAFEEAGYHVAAHGLN 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLD------VQARFIEATFTINTQTLRIGNLYLPHGN 117 +NGVAI S+ ++ P +R+ +LY+P+G Sbjct: 61 QWNGVAIASREPLEDVEIGFPDMPGFEKGKEGPDLPQEARAIGATVNGVRVWSLYVPNGR 120 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIF--AGDYNIIPQPHDCYNPIIWEN-DAC 174 + Y K+ W+++ ++ + L + L GD+NI P D +P + E Sbjct: 121 GLDDPHYAYKLDWLEKLRQYTADTLAKDPDLPLALTGDFNIAPTDADNGDPTVVEGATTH 180 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 + R +F + G TD +R T Y++WDY + +N+G+RID I+ S Sbjct: 181 VSPAERAAFAAFETAGLTDVVRPLIPTG--YTYWDYKQLRFPRNEGLRIDFILGSRAFAD 238 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261 + A I R PSDH PV+ L Sbjct: 239 AVQGAEIHRDERKGEVPSDHVPVVADL 265 >gi|320010283|gb|ADW05133.1| exodeoxyribonuclease III Xth [Streptomyces flavogriseus ATCC 33331] Length = 271 Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats. Identities = 58/270 (21%), Positives = 109/270 (40%), Gaps = 10/270 (3%) Query: 3 VVTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++TV T NVN IRA + W+ ++ICLQE + E + P E + +H Sbjct: 1 MLTVTTVNVNGIRAAVKKGFVEWLGRTEAEVICLQEVRAEAQQLPDEVREPEGWHAVYAP 60 Query: 62 Q--KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIE--ATFTINTQTLRIGNLYLPHGN 117 K GV IL++ P + G ++ F ++ + + +LYLP G Sbjct: 61 AAAKGRAGVGILTRRAPERVQIGFGGFEVPGSEEFDTSGRYIEVDLPGVTVASLYLPSGE 120 Query: 118 PITSTKYD---DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 T + + +++ ++ ++ GD+NI + D N ++ Sbjct: 121 VGTERQEEKERFMAAFLPYLQGLKARAAAGGREVVVCGDWNIAHREADLKNWKSNRKNSG 180 Query: 175 FTLEVRQSFQKLQNMGFTDAIRA--THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 F E R+ ++ + + + YS+W Y ++ + G RID+ + +P Sbjct: 181 FLPEEREWLTRVFDEAAYVDVVRALHPEQEGPYSWWSYRGRAFDNDAGWRIDYQVATPGL 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 A ++ + SDH PV V+ + Sbjct: 241 AGRAAKAWVERAATHGERWSDHAPVTVTYE 270 >gi|309775417|ref|ZP_07670420.1| exodeoxyribonuclease III [Erysipelotrichaceae bacterium 3_1_53] gi|308916806|gb|EFP62543.1| exodeoxyribonuclease III [Erysipelotrichaceae bacterium 3_1_53] Length = 254 Score = 186 bits (471), Expect = 3e-45, Method: Composition-based stats. Identities = 67/261 (25%), Positives = 111/261 (42%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN IRA + + E + DI C+QETK + ET + ++ + + Sbjct: 1 MRLVSWNVNGIRACMQKGFMDFFNEIDADIFCIQETKMQPGQLEIET-PLYHQYMNSAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G + SK +PI + L ++ D + R I + + Sbjct: 60 KGYSGTMVFSKQEPIHVSYGLGIEEHDHEGRVITCEYEDFYLVCVYTPNSKDGLLRLDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + R +L + ++ GD N+ + D NP +A FT E R Sbjct: 120 M------EWEDAFRTYLHKLNETKSVLVCGDLNVAHKEIDLKNPKTNRRNAGFTDEERNK 173 Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 L + GF D+ R + +YS+W Y + KN G RID+ ++S +A + A+I Sbjct: 174 MSVLLDSGFIDSYRYLYPEQEGVYSWWSYRFKAREKNAGWRIDYFLVSEDAKDGIREAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 T G SDH PV + + Sbjct: 234 HTDIYG----SDHCPVSLEFE 250 >gi|164688495|ref|ZP_02212523.1| hypothetical protein CLOBAR_02140 [Clostridium bartlettii DSM 16795] gi|164602908|gb|EDQ96373.1| hypothetical protein CLOBAR_02140 [Clostridium bartlettii DSM 16795] Length = 252 Score = 186 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 69/258 (26%), Positives = 110/258 (42%), Gaps = 13/258 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN IRA + + E + DI CLQETK ++ + L + + + Sbjct: 1 MKFISWNVNGIRACVTKGFLDFFNEVDADIFCLQETKLQEGQIELD-LPGYHQYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +PI + + ++ D + R I F + Sbjct: 60 KGYSGTAIFTKQEPISVNYGIQIEEHDKEGRVITLEFDNFYFVTVYTPNSQSELKRLDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + R +L ++ +I GD N+ + D NP +A FT + R+ Sbjct: 120 M------KWEDDFRKYLLKLNSKKGVIVCGDLNVAHKEIDLKNPKTNRKNAGFTDQEREK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L GF D R + +YS+W Y + KN G RID+ S + + L SA I Sbjct: 174 FTELLESGFIDTYRHFNPDKEGIYSWWSYRFKAREKNAGWRIDYFCASKDLENNLVSADI 233 Query: 242 DTKPRGWTKPSDHTPVIV 259 T+ G SDH P+ + Sbjct: 234 HTQILG----SDHCPIEL 247 >gi|160936797|ref|ZP_02084163.1| hypothetical protein CLOBOL_01687 [Clostridium bolteae ATCC BAA-613] gi|158440289|gb|EDP18035.1| hypothetical protein CLOBOL_01687 [Clostridium bolteae ATCC BAA-613] Length = 251 Score = 186 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 70/262 (26%), Positives = 117/262 (44%), Gaps = 13/262 (4%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + +WNVN +RA + + +E D+ C+QE+K ++ + L + + Sbjct: 1 MTKLISWNVNGLRACVGKGFLDFFREAEADVFCIQESKLQEGQIELD-LPGYHQYWNYAR 59 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G A+ +K +P+ + + ++ D + R I A F + Sbjct: 60 KKGYSGTAMFTKEEPVSVSYGIGMEEHDTEGRVITAEFPE-----YYVVTCYTPNSQDGL 114 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + D ++ W FL + + LE +P++F GD N+ + D NP +A FT E R Sbjct: 115 ARLDYRMKWEDDFLAYLKK-LEENKPVVFCGDLNVAHKEIDLKNPKTNRKNAGFTDEERG 173 Query: 182 SFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 F L GF D R + YS+W Y + +KN G RID+ +S L SA Sbjct: 174 KFTDLLAAGFVDTFRYFYPDLEGTYSWWSYRFSARAKNAGWRIDYFCVSESLKDRLVSAS 233 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I G SDH PV + ++ Sbjct: 234 IHNTVMG----SDHCPVELVIE 251 >gi|254500351|ref|ZP_05112502.1| exodeoxyribonuclease III [Labrenzia alexandrii DFL-11] gi|222436422|gb|EEE43101.1| exodeoxyribonuclease III [Labrenzia alexandrii DFL-11] Length = 269 Score = 186 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 80/266 (30%), Positives = 126/266 (47%), Gaps = 9/266 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62 + + TWN+NS+R R+ + I+E PD+ICLQETK D NFP + ++ Y H+ GQ Sbjct: 5 LKLVTWNINSVRLRMPIVEQLIEEVAPDVICLQETKCPDANFPEKAFRTAGYEHMAINGQ 64 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+GVA +SK + + +R + N LR+ N Y+P G Sbjct: 65 KGYHGVATVSKLPLTNVEKRDFCNVG--DSRHVAVDVPFNGSALRVHNFYVPAGGDEPDR 122 Query: 123 KYDDKISWIKRFLRFASQRLE---LEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 +DK FL + L+ +P + GD N+ P HD ++ T Sbjct: 123 DKNDKFGHKLDFLGEMQEWLQGAETAKPAVLVGDLNVAPYEHDVWSHKKLLKVVSHTPIE 182 Query: 180 RQSFQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLL 236 + F+ ++ + T LY++W Y A W + +KG R+DH+ +S A++ + Sbjct: 183 TELFETVRETGGWLDAMRQFTPMEEKLYTWWSYRAKDWSAADKGRRLDHVWVSEPASNHI 242 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLD 262 S + RGW KPSDH PV+ + Sbjct: 243 KSTEVLRDARGWEKPSDHAPVVAVFE 268 >gi|19553934|ref|NP_601936.1| exonuclease III [Corynebacterium glutamicum ATCC 13032] gi|62391577|ref|YP_226979.1| exodeoxyribonuclease III [Corynebacterium glutamicum ATCC 13032] gi|145296740|ref|YP_001139561.1| hypothetical protein cgR_2644 [Corynebacterium glutamicum R] gi|21325513|dbj|BAC00135.1| Exonuclease III [Corynebacterium glutamicum ATCC 13032] gi|41326919|emb|CAF20763.1| EXODEOXYRIBONUCLEASE III [Corynebacterium glutamicum ATCC 13032] gi|140846660|dbj|BAF55659.1| hypothetical protein [Corynebacterium glutamicum R] Length = 263 Score = 186 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 71/267 (26%), Positives = 120/267 (44%), Gaps = 11/267 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + WNVNS R R+ + ++ ++ D++ +QETK +D+ FP E + Y + G Sbjct: 1 MRIVNWNVNSARTRVDRMVDFLLRHDVDVLAVQETKCKDEQFPTERFTEIGYEVAHFGLN 60 Query: 64 SYNGVAILSKYQPIEIVTHL-----PGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 +NGVAI+S+ + TH D+ + +++ +LY+P+G Sbjct: 61 QWNGVAIISRVGIENVETHFPAQPGFNKDITKEQSIEARAIGARCGGVQVWSLYVPNGRE 120 Query: 119 ITSTKYDDKISWIK--RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 I YD K+ W+ R + EE L+ GD+NI P D ++ +E T Sbjct: 121 IADPHYDYKLRWLFSLRNYVIDTLEYRPEEKLVLLGDFNIAPTDIDVWDIAAFEGKTHVT 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 R + + ++ T Y++WDY + K +G+RID + SP + Sbjct: 181 EPERAA----FDGLIEAGLKETTPGPGTYTYWDYKGARFLKGEGMRIDFQLASPALAATA 236 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263 +D + R T SDH PVIV + Sbjct: 237 GETFVDVEERSGTGASDHAPVIVDYKV 263 >gi|261408787|ref|YP_003245028.1| exodeoxyribonuclease III Xth [Paenibacillus sp. Y412MC10] gi|261285250|gb|ACX67221.1| exodeoxyribonuclease III Xth [Paenibacillus sp. Y412MC10] Length = 250 Score = 186 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 68/261 (26%), Positives = 109/261 (41%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + E + DI C+QETK + + + + Sbjct: 1 MKLVSWNVNGLRACVTKGFMDYFNEADADIFCVQETKLQAGQIELDLGPEYQQYWNYAEK 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G A+ ++ P+ + L D + N + Sbjct: 61 KGYSGTAVFTRIAPLSVRYGLEEDSEPEGRVITLEFEGFYLVNVYTPNA------KRDLS 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + D ++ W +RF + Q L+ +P+I GD N+ Q D N ++ FTLE R Sbjct: 115 RLDYRLEWEERFRTYLLQ-LDERKPVIVCGDLNVAHQEIDLKNAKSNHGNSGFTLEERGK 173 Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 L GF D+ R + +YS+W Y A +N G RID+ + S L A I Sbjct: 174 MTDLLAAGFIDSFRHFYPDRTDVYSWWSYMAKVRERNIGWRIDYFLTSARLAEKLKDAEI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 D G SDH PV ++L+ Sbjct: 234 DCHVLG----SDHCPVSLTLE 250 >gi|114707701|ref|ZP_01440596.1| putative exodeoxyribonuclease iii protein [Fulvimarina pelagi HTCC2506] gi|114536945|gb|EAU40074.1| putative exodeoxyribonuclease iii protein [Fulvimarina pelagi HTCC2506] Length = 267 Score = 186 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 77/265 (29%), Positives = 123/265 (46%), Gaps = 9/265 (3%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64 + TWN+NS+R R ++ ++K PD++CLQETK ++ FP + L Y H+ GQK Sbjct: 5 LTTWNINSVRLRAESVVKFLKMEQPDVLCLQETKCTNEQFPHAAFEGLGYDHVALHGQKG 64 Query: 65 YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124 Y+GVA+LSK ++V AR + + + +R+ NLY+P G + Sbjct: 65 YHGVAVLSKLPFEDVVR--QDFCEVGDARHLSVKLKVADRAIRVHNLYVPAGGDEPDAEV 122 Query: 125 DDKISWIKRFLRFASQRLELEEPLI---FAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180 + K +F+ + E + GD NI P D ++ T E Sbjct: 123 NPKFGHKLQFIEEMRKMRAEGEAGVSALLCGDLNIAPYESDVWSHKQMLKIVSHTPVETS 182 Query: 181 QSFQKLQNMGFTDAIRATHDTHHL-YSFWDYYADSW-SKNKGIRIDHIMLSPEATSLLHS 238 + G+TD +R +++W Y A W + N+G R+DH+ S + + L Sbjct: 183 GLLTAMSEGGWTDLMRRHVPMEEKLFTWWSYRAKDWAASNRGRRLDHVWGSADLAARLSD 242 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263 + T RGW +PSDH PV S + Sbjct: 243 VNVLTDARGWERPSDHVPVTASFAL 267 >gi|255280445|ref|ZP_05345000.1| exodeoxyribonuclease III [Bryantella formatexigens DSM 14469] gi|255268910|gb|EET62115.1| exodeoxyribonuclease III [Bryantella formatexigens DSM 14469] Length = 253 Score = 186 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 69/264 (26%), Positives = 116/264 (43%), Gaps = 14/264 (5%) Query: 3 VVT-VATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 ++ + +WNVN +RA + + KE + DI C+QE+K ++ L+ + + Sbjct: 1 MMKKMISWNVNGLRACVQKGFLEYFKEADADIFCIQESKLQEGQIEL-PLEGYHQYWNYA 59 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+G A+ SK +P+ + + ++ D + R I F + Sbjct: 60 KKKGYSGTAVFSKEEPLSVSYGIGIEEHDQEGRVITLEFDTYYLVTVYTPNSQNELARLP 119 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + + LE +P+IF GD N+ + D NP +A FT E R Sbjct: 120 YRM------TWEEAFLAYLKGLEKNKPVIFCGDLNVAHKEIDLKNPKTNRKNAGFTDEER 173 Query: 181 QSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + F ++ GF D R + +YS+W Y + KN G RID+ +S L A Sbjct: 174 EKFSQILENGFIDTYRYFYPEQEGVYSWWSYRFRAREKNAGWRIDYFCVSECLKDRLVDA 233 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 RI T+ G SDH PV + +++ Sbjct: 234 RIHTEITG----SDHCPVELQIEV 253 >gi|269798609|ref|YP_003312509.1| exodeoxyribonuclease III Xth [Veillonella parvula DSM 2008] gi|282849823|ref|ZP_06259207.1| exodeoxyribonuclease III [Veillonella parvula ATCC 17745] gi|294792738|ref|ZP_06757885.1| exodeoxyribonuclease III [Veillonella sp. 6_1_27] gi|269095238|gb|ACZ25229.1| exodeoxyribonuclease III Xth [Veillonella parvula DSM 2008] gi|282580760|gb|EFB86159.1| exodeoxyribonuclease III [Veillonella parvula ATCC 17745] gi|294456637|gb|EFG25000.1| exodeoxyribonuclease III [Veillonella sp. 6_1_27] Length = 251 Score = 186 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 68/262 (25%), Positives = 117/262 (44%), Gaps = 13/262 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + E + DI CLQETK + E L + + + Sbjct: 1 MKLISWNVNGLRAAVTKGFMESFNELDADIFCLQETKLQPDQISLE-LPGYEQYWNSAVK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G A+ ++ +P+ + + ++ D + R I A + + Sbjct: 60 KGYSGTAVFTRIKPLSVTNGIGIEEHDQEGRVITAEYDNFYL-----VCCYTPNSQRELA 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + D +++W F + + L+ ++P+I GD N+ Q D NP +A F+ E R Sbjct: 115 RLDYRMTWEDAFRNYLLE-LDKKKPVILCGDLNVAHQEIDLKNPKTNRKNAGFSDEERAK 173 Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +L GFTD R + YS+W Y + +N G RID+ + S + A+I Sbjct: 174 MTELLGAGFTDTFRHLYPDAIEQYSWWSYMGKARERNTGWRIDYFITSKRLDDKIQEAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 + G SDH PV + +D+ Sbjct: 234 HQQIFG----SDHCPVELVIDL 251 >gi|224024813|ref|ZP_03643179.1| hypothetical protein BACCOPRO_01544 [Bacteroides coprophilus DSM 18228] gi|224018043|gb|EEF76047.1| hypothetical protein BACCOPRO_01544 [Bacteroides coprophilus DSM 18228] Length = 251 Score = 186 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 70/262 (26%), Positives = 113/262 (43%), Gaps = 13/262 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + D CLQETK ++ + + + Sbjct: 1 MKLISWNVNGLRACCDKGFREAFQTLDADFFCLQETKMQEGQLDLS-FEGYTSYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI + +P+ + L D D + R I N + + G Sbjct: 60 KGYSGTAIFTHLKPLNVTYGLGIDVHDHEGRVITLEMD-NFYLVTVYTPNSQDGLKRLDY 118 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + R L+ ++P++ GD N+ + D NP +A FT + R+ Sbjct: 119 R-----MTWEDDFRNYLLELDKKKPVLVCGDLNVAHKEIDLKNPKTNRMNAGFTDQEREK 173 Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 FQ L + GF D R + +YS+W Y + KN G RID+ + S L SA+I Sbjct: 174 FQILLDAGFIDTFRYFYPEQTGIYSWWSYRFKAREKNAGWRIDYFLASRRLADKLESAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 T+ G SDH PV V+L++ Sbjct: 234 HTEIFG----SDHCPVEVTLNV 251 >gi|118592059|ref|ZP_01549453.1| exodeoxyribonuclease III [Stappia aggregata IAM 12614] gi|118435355|gb|EAV42002.1| exodeoxyribonuclease III [Stappia aggregata IAM 12614] Length = 269 Score = 186 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 83/267 (31%), Positives = 120/267 (44%), Gaps = 9/267 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62 + + TWN+NS+R R+ + I E PD+ICLQETK D NFP + Y H+ GQ Sbjct: 5 IKLVTWNINSVRLRMPIVEQLIDEVAPDVICLQETKCPDANFPENAFRKAGYEHMAIHGQ 64 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+GVA LS+ I +R + N ++R+ N Y+P G Sbjct: 65 KGYHGVATLSRLPLSNIEKRDFCQVG--DSRHVAVDVPFNGSSIRLHNFYVPAGGDEPDR 122 Query: 123 KYDDKISWIKRFLRFASQRLELE---EPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-E 178 + K F+ L+ E +P I GD N+ P HD ++ T E Sbjct: 123 TINPKFGHKLDFMNEMLGWLKGEETAKPAILVGDLNVAPYEHDVWSHKKLLKVVSHTPVE 182 Query: 179 VRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLL 236 Q + G+ DA+R LY++W Y A W + +KG R+DH+ +S + Sbjct: 183 TELFEQVREAGGWLDAMRQFTPLDEKLYTWWSYRAKDWSAADKGRRLDHVWVSQPLAPHV 242 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263 + RGW KPSDH PVI + Sbjct: 243 KGTTVLRDARGWEKPSDHAPVIAEFAV 269 >gi|325105846|ref|YP_004275500.1| exodeoxyribonuclease III Xth [Pedobacter saltans DSM 12145] gi|324974694|gb|ADY53678.1| exodeoxyribonuclease III Xth [Pedobacter saltans DSM 12145] Length = 255 Score = 186 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 77/264 (29%), Positives = 122/264 (46%), Gaps = 13/264 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNF-PFETLQSLNYHIETCG 61 + + ++NVN IRA I W++ N D++CLQE K L L YH Sbjct: 1 MKIISYNVNGIRAAINKGWLDWLQATNADVVCLQEIKATPDQIQDIHKLSELGYHHFWYP 60 Query: 62 --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G AIL+K++P+ + + D + R I A F + + Y P G+ Sbjct: 61 AKKKGYSGTAILTKHEPLHVEYGCGIEAYDDEGRVIRADFE----KFSVISAYFPSGS-S 115 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K ++ F +A+ + L+ GDYNI + D +NP N + F E Sbjct: 116 GDERQHFKYQFLADFEIYAADLMNTYPNLLICGDYNICHRAIDIHNPKSNANSSGFLPEE 175 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R+ ++ N GF D R + H Y++W Y A + +KN G RID+ +LS + A Sbjct: 176 REWMERFINSGFIDTFRHLNPDPHHYTWWSYRAGARAKNLGWRIDYHLLSSTMVENIKRA 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 I + K SDH P+++ L Sbjct: 236 AILPEA----KHSDHCPILLELQW 255 >gi|192288715|ref|YP_001989320.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris TIE-1] gi|192282464|gb|ACE98844.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris TIE-1] Length = 270 Score = 186 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 78/268 (29%), Positives = 128/268 (47%), Gaps = 8/268 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62 +T+ TWN+NS+R RI +A ++K PDI+CLQETK D FP + + L Y H+ GQ Sbjct: 3 LTLTTWNINSVRLRIDLVAKFLKAQRPDILCLQETKCPDDAFPLKRFKRLGYEHVALNGQ 62 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT-- 120 K Y+GVA++SK + D +D + + N L + N Y+P G I Sbjct: 63 KGYHGVAVISKLPFVTTDIRTFCDIIDSRHISVSVKTDENAPPLVLHNFYVPAGGDIPDP 122 Query: 121 --STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL- 177 + K+ K+S++ ++ I GD N+ P HD ++ T Sbjct: 123 AVNPKFKHKLSFLDEMKACEPLHPSGDQRHILVGDLNVAPHEHDVWSHKQLLKVVSHTPV 182 Query: 178 EVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSL 235 E + L+ + D R +Y++W Y A W+ ++G R+DHI +S Sbjct: 183 ECEKLLAVLRAGNWVDVARERIPLDQKVYTWWSYRAADWTVGDRGRRLDHIWVSEALKDR 242 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + ++ R W +PSDH PV +++++ Sbjct: 243 VVDFKVLRDARSWERPSDHVPVTMTMEL 270 >gi|294794491|ref|ZP_06759627.1| exodeoxyribonuclease III [Veillonella sp. 3_1_44] gi|294454821|gb|EFG23194.1| exodeoxyribonuclease III [Veillonella sp. 3_1_44] Length = 251 Score = 186 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 68/262 (25%), Positives = 118/262 (45%), Gaps = 13/262 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + E + DI CLQETK + E L + + + Sbjct: 1 MKLISWNVNGLRAAVTKGFMESFNELDADIFCLQETKLQPDQISLE-LPGYEQYWNSAVK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G A+ ++ +P+ + + ++ D + R I A + + Sbjct: 60 KGYSGTAVFTRIKPLSVTNGIGIEEHDQEGRVITAEYDNFYL-----VCCYTPNSQRELA 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + D +++W F + + L+ ++P+I GD N+ Q D NP + +A F+ E R Sbjct: 115 RLDYRMTWEDAFRNYLLE-LDKKKPVILCGDLNVAHQEIDLKNPKMNRKNAGFSDEERAK 173 Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +L GFTD R + YS+W Y + +N G RID+ + S + A+I Sbjct: 174 MTELLGAGFTDTFRHLYPDAIEQYSWWSYMGKARERNTGWRIDYFITSKRLDDKIQEAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 + G SDH PV + +D+ Sbjct: 234 HQQIFG----SDHCPVELVIDL 251 >gi|303229843|ref|ZP_07316620.1| exodeoxyribonuclease III [Veillonella atypica ACS-134-V-Col7a] gi|303231217|ref|ZP_07317955.1| exodeoxyribonuclease III [Veillonella atypica ACS-049-V-Sch6] gi|302514124|gb|EFL56128.1| exodeoxyribonuclease III [Veillonella atypica ACS-049-V-Sch6] gi|302515473|gb|EFL57438.1| exodeoxyribonuclease III [Veillonella atypica ACS-134-V-Col7a] Length = 251 Score = 186 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 67/262 (25%), Positives = 115/262 (43%), Gaps = 13/262 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + E + DI CLQETK + E L + + Sbjct: 1 MKLISWNVNGLRAAVTKGFIDSFNELDADIFCLQETKLQPHQIELE-LPGYEQFWNSAVK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G A+ ++ +PI + + ++ D + R I A + + Sbjct: 60 KGYSGTAVFTRIKPIAVTNGIGIEEHDQEGRVITAEYDNFYL-----VCCYTPNSQRELA 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + D +++W F + + L+ ++P+I GD N+ D NP +A F+ E R Sbjct: 115 RLDYRMTWEDAFRAYLLE-LDKKKPVILCGDLNVAHNEIDLKNPKTNRKNAGFSDEERAK 173 Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +L GFTD R + YS+W Y + +N G RID+ + S + A+I Sbjct: 174 MTELLESGFTDTFRYLYPDAVDEYSWWSYMGKARDRNVGWRIDYFITSKRLDDKIKEAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 + G SDH PV + +++ Sbjct: 234 HQQIFG----SDHCPVELDIEL 251 >gi|227823661|ref|YP_002827634.1| exodeoxyribonuclease III [Sinorhizobium fredii NGR234] gi|227342663|gb|ACP26881.1| exodeoxyribonuclease III [Sinorhizobium fredii NGR234] Length = 268 Score = 186 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 73/266 (27%), Positives = 109/266 (40%), Gaps = 6/266 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 +++ATWN+NS+R R+ + + PDI+CLQETK D FP L+ L Y + Sbjct: 3 LSIATWNINSVRLRMPLVEHLLVNWQPDILCLQETKCPDDQFPSAPLKKLGYKYIEMHGQ 62 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 P+ +T AR + F I +T+R+ N Y+P G Sbjct: 63 KGYHGVATISRLPLTELTDRRNYCGVGDARHLSVVFAIGGKTVRLHNFYVPAGGDEPDRT 122 Query: 124 YDDKISWIKRFLRFASQRL---ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K F+ E I GD NI P HD ++ T Sbjct: 123 INPKFGHKLDFVDEMKLLHAEAEAGISSILVGDLNIAPLEHDVWSHKQLLKIVSHTPVET 182 Query: 181 QSFQKLQNMGFTDAIRATH--DTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLLH 237 + G + H LY++W Y A W+ ++G R+DHI S + + L Sbjct: 183 DGLTTVMTGGAWVDLMRQHTPPPEKLYTWWSYRAKDWAAVDRGRRLDHIWSSADLAAKLL 242 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263 I + RGW +PSDH PVI ++ Sbjct: 243 RVDILREARGWERPSDHVPVIAHFEL 268 >gi|115522424|ref|YP_779335.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris BisA53] gi|115516371|gb|ABJ04355.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris BisA53] Length = 270 Score = 186 bits (471), Expect = 4e-45, Method: Composition-based stats. Identities = 80/270 (29%), Positives = 123/270 (45%), Gaps = 10/270 (3%) Query: 4 VT--VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETC 60 + + TWN+NS+R RI +A ++ PD++CLQETK D FP + + L Y H+ Sbjct: 1 MRFTLTTWNINSVRLRIDLVAKLLEAEQPDVLCLQETKCPDDAFPLKRFKQLGYEHVALN 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 GQK Y+GVA++SK E D+LD + + L + N Y+P G I Sbjct: 61 GQKGYHGVAVVSKIPFAETHIRSFCDNLDSRHISVSFAAEHTQAPLVLHNFYVPAGGDIP 120 Query: 121 ----STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + K+ K+S++ + E I GD N+ P HD ++ T Sbjct: 121 DPELNPKFSHKLSFLDEMKACEPLHPQGEARHILVGDLNVAPHEHDVWSHKQLLKVVSHT 180 Query: 177 L-EVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWS-KNKGIRIDHIMLSPEAT 233 E + Q + D R +Y++W Y A W+ ++G R+DHI +S Sbjct: 181 PIECDKLLAAQQYGNWIDVARDRIPLDQKVYTWWSYRAADWTVGDRGRRLDHIWVSKALQ 240 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 S + I RGW +PSDH PV ++ Sbjct: 241 SHVQDFNILRDARGWERPSDHVPVTAVFEL 270 >gi|302336916|ref|YP_003802122.1| exodeoxyribonuclease III Xth [Spirochaeta smaragdinae DSM 11293] gi|301634101|gb|ADK79528.1| exodeoxyribonuclease III Xth [Spirochaeta smaragdinae DSM 11293] Length = 259 Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats. Identities = 60/266 (22%), Positives = 118/266 (44%), Gaps = 15/266 (5%) Query: 1 MSVV--TVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-- 55 + + +A+WNVN IRA L ++ + + D++CLQETK + + + L +Y Sbjct: 2 LKTMETRIASWNVNGIRAAQKKGLLEYMMQEHADVVCLQETKAKPEQLDEQLLNPSDYRS 61 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + + + Y+GVA+ S+ +P+ + L + E + + + Sbjct: 62 YFSSAERGGYSGVAVYSRKKPLSVS------PLGIAEFDAEGRALLVEFSDFVLINGYFP 115 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + + D K+++ L+ + + ++ GDYNI +P D P E + F Sbjct: 116 NSQSEGARLDYKLAYCDAILKRCNSLVGEGRHVVVCGDYNIAHKPIDLARPKENEGNPGF 175 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R + G+TD R ++ Y++W Y +N G R+D+ E + Sbjct: 176 LPEERAWMSSFLDAGYTDTFRIFNNEGGNYTWWSYRTKGRERNVGWRLDYFCTDKEFENR 235 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 + ++ I ++ G SDH PV++++ Sbjct: 236 VKNSEIRSEVMG----SDHCPVVLTI 257 >gi|288556715|ref|YP_003428650.1| exodeoxyribonuclease [Bacillus pseudofirmus OF4] gi|288547875|gb|ADC51758.1| exodeoxyribonuclease [Bacillus pseudofirmus OF4] Length = 251 Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats. Identities = 68/262 (25%), Positives = 117/262 (44%), Gaps = 13/262 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + E N DI CLQETK ++ E L + + Sbjct: 1 MKLISWNVNGLRACVKKGFLDFFHEQNADIFCLQETKLQEGQIELE-LDGYHQFWNYALK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G A+ +K +PI + + + + + R I F + + N+Y + S Sbjct: 60 KGYSGTAVFTKQKPISVRYGVGELESEDEGRIITLEFD----SFYLVNVYTINAKRDLSR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + L+ L+ +P+++ GD N+ D N ++ FTLE R Sbjct: 116 LPERLEWE--DALKEYLLDLDRHKPVVYCGDLNVAHAEVDLKNARSNHGNSGFTLEERGK 173 Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 L GF D+ R + +++W Y D ++N G RID+ ++S + ++ A I Sbjct: 174 MTTLLESGFIDSFRYLYPERTDAFTWWSYMRDVRARNIGWRIDYFIVSTQLKEKINEASI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 + G SDH P+ + LDI Sbjct: 234 YAEVLG----SDHCPIGLELDI 251 >gi|320528523|ref|ZP_08029680.1| exodeoxyribonuclease III [Solobacterium moorei F0204] gi|320131109|gb|EFW23682.1| exodeoxyribonuclease III [Solobacterium moorei F0204] Length = 251 Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats. Identities = 61/262 (23%), Positives = 114/262 (43%), Gaps = 13/262 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFET-LQSLNYHIETCG 61 + +WNVN +RA + A + E + D LQETK + + + ++ + Sbjct: 1 MKFISWNVNGLRAAMKKGFADFFHEQDADFFALQETKMQPDQLEDAMKFEGYHMYMNSAE 60 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G I +K++P+ + + GD + N + Sbjct: 61 RKGYSGTLIYTKHEPLSVTYEIEGDVTKEGRVITLEYPDFYFVCAYVPN------SKDGL 114 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + +I + LR L+ ++P+I+ GD N+ + D NP + F+ E R Sbjct: 115 LRLPYRI-EWEEMLRKHLMELDKKKPVIYTGDLNVAHEEIDLKNPATNHKNPGFSDEERA 173 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 + KL + GF+D R + +S+W Y + +N G RID+ ++S + + A I Sbjct: 174 AMTKLLDSGFSDTFRELYPDTQKFSWWSYRMKARERNVGWRIDYFLVSERLLANVQDALI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 + G SDH PV +++++ Sbjct: 234 FDETEG----SDHCPVGLNINL 251 >gi|16265144|ref|NP_437936.1| exodeoxyribonuclease III protein [Sinorhizobium meliloti 1021] gi|15141283|emb|CAC49796.1| probable exodeoxyribonuclease III protein [Sinorhizobium meliloti 1021] Length = 257 Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats. Identities = 98/257 (38%), Positives = 150/257 (58%), Gaps = 5/257 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+N+N + R+ L W+ PD++CLQE K D FP +++ Y GQ Sbjct: 1 MKIATFNINGVNKRLDILLTWLGTAEPDVVCLQELKATDGQFPRAAIEAAGYGAVWRGQA 60 Query: 64 SYNGVAILSKYQ-PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 ++NGVAIL++ + P+ T LPGD D Q+R+IEA + I +LY P+GNP Sbjct: 61 AWNGVAILARDREPVLTRTGLPGDSSDTQSRYIEAAVNG----ILIASLYAPNGNPQPGP 116 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K+D K++W RF + A+ LE P++ AGDYN++P+P D Y ++++A E R + Sbjct: 117 KFDYKLAWHLRFNQHAAALLETGVPVVLAGDYNVVPEPRDIYPTRSYDDNALVQPESRAA 176 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F+ L + G+ DA+R H L++FWDY + W ++ G+R+DHI+LS + L A ID Sbjct: 177 FRSLVDQGWLDALRKIHPKEELFTFWDYRRNRWQRDAGLRLDHILLSRKLRRRLTGAGID 236 Query: 243 TKPRGWTKPSDHTPVIV 259 + R SDH PV V Sbjct: 237 REIRALEGSSDHAPVWV 253 >gi|217976524|ref|YP_002360671.1| exodeoxyribonuclease III Xth [Methylocella silvestris BL2] gi|217501900|gb|ACK49309.1| exodeoxyribonuclease III Xth [Methylocella silvestris BL2] Length = 270 Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats. Identities = 82/265 (30%), Positives = 121/265 (45%), Gaps = 8/265 (3%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64 +ATWN+NS+R RI +A ++ E+ PD++CLQETK D FP L Y H+E GQK Sbjct: 5 IATWNINSVRLRIDLVARFLNEHAPDLLCLQETKCRDAEFPLSAFHKLGYPHVEINGQKG 64 Query: 65 YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124 Y+GVAI S+ +I + D + + T + +R+ N Y+P G Sbjct: 65 YHGVAIASRLPLGDIDRRGFCEKGDARHLAVSFTPQGAARPVRLHNFYVPAGGDEPDPLI 124 Query: 125 DDKISWIKRFLRFASQRLELE----EPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K + FL + + I GD NI P D ++ T Sbjct: 125 NPKFAHKLAFLDEMAAWMHHGAIAASDAILVGDLNIAPLEADVWSHKALLRVVSHTPIEV 184 Query: 181 QSFQKLQNM--GFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLH 237 + F Q R LY++W Y A W+ +G R+DH+++S L Sbjct: 185 EKFGVFQQAGPWVDAMRRYVPPEEKLYTWWSYRARDWALSGRGRRLDHVLVSESLAPRLG 244 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLD 262 ++ T+ RGW +PSDH PVIV D Sbjct: 245 GMKVLTESRGWERPSDHVPVIVRFD 269 >gi|315652833|ref|ZP_07905807.1| exodeoxyribonuclease III [Eubacterium saburreum DSM 3986] gi|315485035|gb|EFU75443.1| exodeoxyribonuclease III [Eubacterium saburreum DSM 3986] Length = 259 Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats. Identities = 71/265 (26%), Positives = 125/265 (47%), Gaps = 15/265 (5%) Query: 1 MSVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 M + +WNVN +RA + + ++ + DI C+QE+K + + +Y Sbjct: 8 MKKM--ISWNVNGLRAAVTKGFLDFFRDIDADIFCIQESKLSEGQIELDLPGYYDY-WNY 64 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GVA+ +K +PI + + D+ D + R I A + + Sbjct: 65 ATKKGYSGVAVFTKDKPINVTYGIGIDEHDNEGRVITAEYDEFYLI-----TCYTPNSQR 119 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 T+ D +++W F + +LE ++P+IF GD N+ + D NP +A FT E Sbjct: 120 GLTRLDYRMTWEDAF-LDYALKLEEKKPVIFCGDLNVAHKEIDLKNPKTNRKNAGFTDEE 178 Query: 180 RQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R + + GF D+ R + YS+W Y + +KN G RID+ ++S + + Sbjct: 179 RAKMDIILSSGFVDSFRLLYPDKTDAYSWWSYMGGARAKNVGWRIDYFIVSAKLKDRIKE 238 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263 A+I ++ G SDH PV + ++I Sbjct: 239 AKIHSEVLG----SDHCPVELDIEI 259 >gi|239624599|ref|ZP_04667630.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239520985|gb|EEQ60851.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 251 Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats. Identities = 71/260 (27%), Positives = 120/260 (46%), Gaps = 13/260 (5%) Query: 5 TVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 +WNVN +RA + + KE + D+ C+QE+K ++ + L + + +K Sbjct: 3 KFISWNVNGLRACVGKGFLDFFKEIDADVFCIQESKLQEGQIDLD-LPGYHQYWNYALKK 61 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 Y+G A+ ++ +P+ + + ++ D + R I A F + + Sbjct: 62 GYSGTAMFTREEPLSVSYGIGMEEHDTEGRVITAEFPD-----YYVVTCYTPNSQDGLAR 116 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 D ++ W FL + LE ++P++F GD N+ + D NP +A FT E R F Sbjct: 117 LDYRMKWEDDFLAYLKG-LEKKKPVVFCGDLNVAHKEIDLKNPKTNRKNAGFTDEERGKF 175 Query: 184 QKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 L + GF D R + +YS+W Y + +KN G RID+ +S L SA I Sbjct: 176 TDLLSAGFIDTFRYFYPDAEGIYSWWSYRFSARAKNAGWRIDYFCVSESLKDRLVSAAIH 235 Query: 243 TKPRGWTKPSDHTPVIVSLD 262 T+ G SDH PV + ++ Sbjct: 236 TEVMG----SDHCPVELVME 251 >gi|58584986|ref|YP_198559.1| exonuclease III [Wolbachia endosymbiont strain TRS of Brugia malayi] gi|58419302|gb|AAW71317.1| Exonuclease III [Wolbachia endosymbiont strain TRS of Brugia malayi] Length = 260 Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats. Identities = 88/256 (34%), Positives = 147/256 (57%), Gaps = 1/256 (0%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 ++ +ATWNVNSIR R+ L ++I ++ DII LQE K ++ FP+ ++ L Y G+ Sbjct: 1 MLKIATWNVNSIRKRVDQLCSFIVDDQIDIILLQEIKCTEEQFPYVEIEKLGYECIVYGE 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 + NGV +LSK+ +E + + +AR+IE N Q +R+ ++Y+P+G + S Sbjct: 61 VARNGVCVLSKHPILEKFK-IDIVEGYQEARYIECLIKHNNQKMRVVSIYVPNGQSLGSH 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 ++ K+ ++ L+ EE ++ AGDYN+ P D ++P + CF ++ R+ Sbjct: 120 VFEYKLKFLDNLYERMDNLLKNEELIVIAGDYNVAPDEIDVFDPTLLNGQVCFHIKEREK 179 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 + + N+GF DA R +H +S+W Y +S N+G+RIDH++LSP+A L ID Sbjct: 180 LKAILNLGFKDAFRMSHPNLQQFSWWRYQGNSLRNNQGMRIDHMLLSPQAVDKLGICYID 239 Query: 243 TKPRGWTKPSDHTPVI 258 + R PSDHTP++ Sbjct: 240 DRLRKLENPSDHTPIV 255 >gi|307320300|ref|ZP_07599718.1| exodeoxyribonuclease III Xth [Sinorhizobium meliloti AK83] gi|306894022|gb|EFN24790.1| exodeoxyribonuclease III Xth [Sinorhizobium meliloti AK83] Length = 257 Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats. Identities = 98/257 (38%), Positives = 150/257 (58%), Gaps = 5/257 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+N+N + R+ L W+ PD++CLQE K D FP +++ Y GQ Sbjct: 1 MKIATFNINGVNKRLDILLTWLGTAEPDVVCLQELKATDGQFPRAAIEAAGYGAVWRGQA 60 Query: 64 SYNGVAILSKYQ-PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 ++NGVAIL++ + P+ T LPGD D Q+R+IEA + I +LY P+GNP Sbjct: 61 AWNGVAILARDREPVLTRTGLPGDSSDTQSRYIEAAVNG----ILIASLYAPNGNPQPGP 116 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K+D K++W RF + A+ LE P++ AGDYN++P+P D Y ++++A E R + Sbjct: 117 KFDYKLAWHLRFNQHAAALLETGVPVVLAGDYNVVPEPRDIYPTRSYDDNALVQPESRAA 176 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F+ L + G+ DA+R H L++FWDY + W ++ G+R+DHI+LS + L A ID Sbjct: 177 FRSLVDQGWLDALRKIHPKEQLFTFWDYRRNRWQRDAGLRLDHILLSRKLRRRLTGAGID 236 Query: 243 TKPRGWTKPSDHTPVIV 259 + R SDH PV V Sbjct: 237 REIRALEGSSDHAPVWV 253 >gi|198276716|ref|ZP_03209247.1| hypothetical protein BACPLE_02915 [Bacteroides plebeius DSM 17135] gi|198270241|gb|EDY94511.1| hypothetical protein BACPLE_02915 [Bacteroides plebeius DSM 17135] Length = 252 Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats. Identities = 72/263 (27%), Positives = 121/263 (46%), Gaps = 13/263 (4%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ + +WNVN +RA + + D CLQETK ++ + + Sbjct: 1 MIKLISWNVNGLRACCDKGFRDIFTQLDADFFCLQETKMQEGQLDLS-FEGYTSYWNYAE 59 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G AI +K+QP+++ L D+ D + R I + Sbjct: 60 KKGYSGTAIFTKHQPLQVTYGLGIDEHDHEGRVITLEMEKF-----FLVTVYTPNSQDGL 114 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + D +++W F + Q+L+ +P++ GD N+ + D NP +A FT + R+ Sbjct: 115 KRLDYRMTWDDDFRAY-LQKLDQSKPVLVCGDLNVAHKEIDLKNPKTNRMNAGFTDQERE 173 Query: 182 SFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 FQ L + GF D R + ++YS+W Y + KN G RID+ + S L A+ Sbjct: 174 KFQLLLDAGFIDTFRYFYPEQTNIYSWWSYRFKAREKNAGWRIDYFLASASLADKLKEAK 233 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263 I T+ G SDH PV V+++I Sbjct: 234 IHTEIFG----SDHCPVEVTVEI 252 >gi|325954395|ref|YP_004238055.1| exodeoxyribonuclease III Xth [Weeksella virosa DSM 16922] gi|323437013|gb|ADX67477.1| exodeoxyribonuclease III Xth [Weeksella virosa DSM 16922] Length = 255 Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats. Identities = 80/263 (30%), Positives = 129/263 (49%), Gaps = 13/263 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60 + + ++NVN IRA + L W++ NPDI C+QETK + + +Q+L Y + + Sbjct: 1 MKIISYNVNGIRAALRKGLTEWLRVANPDIFCVQETKAQPEQVDISEIQALGYTAYWHSA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GVAI SK QP + D +D + R I F + +LYLP G + Sbjct: 61 QRKGYSGVAIFSKIQPKNVEIGTGIDYIDHEGRVIRLDFD----QFSVISLYLPSGTNME 116 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 D K+ + + FL + + L+ AGDYNI + D ++PI + F R Sbjct: 117 ER-LDFKLQFCEDFLNYIRNLKQNIPNLVIAGDYNICHEAIDIHDPICNAKVSGFLPVER 175 Query: 181 QSFQKLQNMGFT-DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + + D+ R H Y++W Y A++ + NKG RID+ M+S + + + Sbjct: 176 DWMTRFIDQCEMIDSYRFFVKEPHHYTWWSYRANARANNKGWRIDYHMVSHQLKNNIKRV 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 I T+ K SDH P++V L+ Sbjct: 236 GILTEA----KHSDHCPILVELE 254 >gi|304439168|ref|ZP_07399086.1| exodeoxyribonuclease III [Peptoniphilus duerdenii ATCC BAA-1640] gi|304372300|gb|EFM25888.1| exodeoxyribonuclease III [Peptoniphilus duerdenii ATCC BAA-1640] Length = 254 Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats. Identities = 70/265 (26%), Positives = 114/265 (43%), Gaps = 13/265 (4%) Query: 1 MSVVTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 M +WNVN IRA + +E NPDII LQE K + E + + + Sbjct: 1 MMTKKFVSWNVNGIRAALKKGFMESFEELNPDIIGLQEIKLSEGQLDLE-IPGYHMYWNY 59 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G A+ ++ +P+ + + ++ D + R I + + Sbjct: 60 AEKKGYSGTAVFTREEPLSVSYGIGIEEHDKEGRVITLEYPE-----YYFITCYTPNSQR 114 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + D ++ W + F RL+ +P++ GD N+ D NP +A F+ E Sbjct: 115 GLARLDYRMEWEEAF-LEYLNRLDEVKPVVLCGDLNVAHNEIDLKNPESNRKNAGFSDEE 173 Query: 180 RQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R F KL G+TD R + YS+W Y+ + +N G RID+ ++S + Sbjct: 174 RDKFTKLLEAGYTDTFRYLYPDKEDEYSWWSYFRQARDRNIGWRIDYFVVSKVLEDKIVE 233 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263 A I G SDH PV V L++ Sbjct: 234 ASIHQNIMG----SDHCPVSVELNL 254 >gi|254491099|ref|ZP_05104280.1| exodeoxyribonuclease III [Methylophaga thiooxidans DMS010] gi|224463612|gb|EEF79880.1| exodeoxyribonuclease III [Methylophaga thiooxydans DMS010] Length = 259 Score = 185 bits (470), Expect = 5e-45, Method: Composition-based stats. Identities = 72/268 (26%), Positives = 114/268 (42%), Gaps = 13/268 (4%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + T NVN IRA W+ + N D++C+QETK + YH Sbjct: 1 MRIITVNVNGIRAAARKGFFDWLLKQNADVVCIQETKAQIHQLEDAVFTPQGYHCFYHDA 60 Query: 62 -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GVA+ + +P E++ + + DV+ R+IEA F L + +LY+P G+ Sbjct: 61 EKKGYSGVALYCRSEPDEVIVGMDNPEFDVEGRYIEARFG----KLSVISLYMPSGSSKE 116 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + ++ + + GD+NI + D N ++ F E R Sbjct: 117 ERQQVKYRCMDFFEIKMQEMKAS-GRDYVITGDWNIAHKNEDIRNWKGNLKNSGFLPEER 175 Query: 181 QSFQK-LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 K MGF DA R H Y++W +W+ N G RID+ +LSP + + Sbjct: 176 AWLDKLFDEMGFVDAFRELPQQEHEYTWWSNRGQAWANNVGWRIDYHILSPSMKGTVKAT 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPR 267 I R SDH P+ + D P Sbjct: 236 DIYRDER----FSDHAPLTIDYDYAMPE 259 >gi|296119006|ref|ZP_06837579.1| exodeoxyribonuclease III [Corynebacterium ammoniagenes DSM 20306] gi|295968104|gb|EFG81356.1| exodeoxyribonuclease III [Corynebacterium ammoniagenes DSM 20306] Length = 269 Score = 185 bits (470), Expect = 6e-45, Method: Composition-based stats. Identities = 71/267 (26%), Positives = 128/267 (47%), Gaps = 8/267 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+NS+R R + +++ D++CLQETK D FP E + YH+ G Sbjct: 1 MRIATWNINSVRTRGERALNLMDKHDIDVLCLQETKVADDKFPRELFEDAGYHVVFHGLN 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT-----QTLRIGNLYLPHGNP 118 +NGVAI+S+ +P E++T P E + + I +LY+P+G Sbjct: 61 QWNGVAIVSREEPSEVITGFPEQPGYHNDEDKEQAPEARALGAVIRNVEIWSLYVPNGRE 120 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 IT YD K+ ++ R+A + + L+ GD+NI P+ D ++ ++ T E Sbjct: 121 ITQRHYDYKLDFLYALARYAEGKKREK--LLLTGDFNIAPRNEDVWDLELFRGKTHVT-E 177 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 ++ + + + + ++++DY + + K++G+RID M + + Sbjct: 178 PERAAFQRLEEAGLEEVTRQYTEKDRWTYFDYKSMRFQKDEGMRIDFQMATKSLAEKVTG 237 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIPE 265 A +D K R SDH + D+P+ Sbjct: 238 AGLDRKERAEKGTSDHLLLWADFDLPD 264 >gi|310643609|ref|YP_003948367.1| exodeoxyribonuclease iii xth [Paenibacillus polymyxa SC2] gi|309248559|gb|ADO58126.1| Exodeoxyribonuclease III Xth [Paenibacillus polymyxa SC2] Length = 254 Score = 185 bits (470), Expect = 6e-45, Method: Composition-based stats. Identities = 72/260 (27%), Positives = 116/260 (44%), Gaps = 13/260 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + ++KE + DI C+QETK ++ E ++ + + Sbjct: 1 MKLISWNVNGLRACVTKGFYTYLKETDADIFCVQETKLQEGQILMENMEEYAQYWNYAEK 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +P+ + L ++ + N + Sbjct: 61 KGYSGTAIFTKIKPLSVHYGLEENEEPEGRTITLEFEKFYLVNVYTPNT------KRDLS 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + ++ W RF + Q+L+ ++P+I GD N+ Q D N +A FT E R Sbjct: 115 RLPYRLEWEDRFRSY-LQQLDAQKPVIICGDLNVAHQEIDLKNAKANYGNAGFTPEERDR 173 Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +L N GF D R + +YS+W Y +N G RID+ ++S LL A I Sbjct: 174 MSQLLNAGFIDTFRYFYPDRTDVYSWWSYMPKVRERNIGWRIDYFLVSERLRPLLMDASI 233 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 D G SDH PVI+ L Sbjct: 234 DCHITG----SDHCPVILDL 249 >gi|307308870|ref|ZP_07588558.1| exodeoxyribonuclease III Xth [Sinorhizobium meliloti BL225C] gi|306900675|gb|EFN31287.1| exodeoxyribonuclease III Xth [Sinorhizobium meliloti BL225C] Length = 257 Score = 185 bits (470), Expect = 6e-45, Method: Composition-based stats. Identities = 99/257 (38%), Positives = 150/257 (58%), Gaps = 5/257 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+N+N + R+ L W+ PD++CLQE K D FP +++ Y GQ Sbjct: 1 MKIATFNINGVNKRLDILLTWLGTAEPDVVCLQELKATDGQFPRAAIEAAGYGAVWRGQA 60 Query: 64 SYNGVAILSKYQ-PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 ++NGVAIL++ + P+ T LPGD D Q+R+IEA + I +LY P+GNP Sbjct: 61 AWNGVAILARDREPVLTRTGLPGDSSDTQSRYIEAAVNG----ILIASLYAPNGNPQPGP 116 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K+D K++W RF + A+ LE P++ AGDYNI+P+P D Y ++++A E R + Sbjct: 117 KFDYKLAWHLRFNQHAAALLETGVPVVLAGDYNIVPEPRDIYPTRSYDDNALVQPESRAA 176 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F+ L + G+ DA+R H L++FWDY + W ++ G+R+DHI+LS + L A ID Sbjct: 177 FRSLVDQGWLDALRKIHPKEQLFTFWDYRRNRWQRDAGLRLDHILLSRKLRRRLTGAGID 236 Query: 243 TKPRGWTKPSDHTPVIV 259 + R SDH PV V Sbjct: 237 REIRALEGSSDHAPVWV 253 >gi|227535760|ref|ZP_03965809.1| exodeoxyribonuclease III [Sphingobacterium spiritivorum ATCC 33300] gi|227244248|gb|EEI94263.1| exodeoxyribonuclease III [Sphingobacterium spiritivorum ATCC 33300] Length = 255 Score = 185 bits (470), Expect = 6e-45, Method: Composition-based stats. Identities = 72/262 (27%), Positives = 116/262 (44%), Gaps = 13/262 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPF-ETLQSLNY--HIET 59 + + T+NVN +RA + W+K N D+ICLQE K P L+ L + + Sbjct: 1 MKIITYNVNGLRAALKKGWLDWLKSTNADVICLQEIKATPDLIPEIALLEQLGFEHYWYP 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G AI +K P + + D + R I A F + Sbjct: 61 AQKKGYSGTAIFTKVSPKRVEYGCGHELYDFEGRIIRADFEKFSVMST-----YFPSGTT 115 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K ++ F +++ + L+ LI GDYNI + D +NP N + F E Sbjct: 116 GEARQTFKYQFLDDFQQYSDRLLKDIPNLIVCGDYNICHRAIDIHNPKSNANTSGFLPEE 175 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R+ + N G+ D+ R + H YS+W Y A + ++N G RID+ M+S S + + Sbjct: 176 REWMENFINSGYVDSFRHLNPEPHQYSWWSYRAGARARNLGWRIDYNMVSAPLASQIEKS 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261 + SDH PV+V + Sbjct: 236 YLLNDA----VHSDHCPVVVEI 253 >gi|312147931|gb|ADQ30590.1| exodeoxyribonuclease III [Borrelia burgdorferi JD1] Length = 255 Score = 185 bits (469), Expect = 6e-45, Method: Composition-based stats. Identities = 58/260 (22%), Positives = 105/260 (40%), Gaps = 12/260 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFE-TLQSLNYHIETCG 61 + + +WNVN IRA + ++KE PDI+C+QETK + P + ++ + Sbjct: 1 MKLISWNVNGIRAVLKKGFLEFVKEYTPDILCIQETKALREQLPKDLIFENYYSYFSNSK 60 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 K Y+GV I SK +PI + + + I + + Sbjct: 61 IKGYSGVCIYSKVEPISVRLLGEEIFDNEGRGLVACYDDF------ILVNGYFPNSQVLR 114 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + K++++ A + + ++ GD+NI D +P + + +E Sbjct: 115 RRLGYKLNFLSYVENLADSLVCDGKNVVICGDFNIAHTEIDLISPDSNRDSPGYYIEETT 174 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 N G+ D R + Y++W Y + +N G RID+ +++ + + I Sbjct: 175 WLDDFLNKGYVDTFRIFNKDPGYYTWWSYRTRARERNMGWRIDYFIVNEFFKRNVEKSLI 234 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 K G SDH PV + L Sbjct: 235 LDKVMG----SDHCPVFLEL 250 >gi|86747505|ref|YP_484001.1| exodeoxyribonuclease III [Rhodopseudomonas palustris HaA2] gi|86570533|gb|ABD05090.1| exodeoxyribonuclease III [Rhodopseudomonas palustris HaA2] Length = 270 Score = 185 bits (469), Expect = 6e-45, Method: Composition-based stats. Identities = 81/271 (29%), Positives = 129/271 (47%), Gaps = 9/271 (3%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIET 59 MS T+ TWN+NS+R RI +A ++K PD++CLQETK D FP + + L Y HI Sbjct: 1 MS-FTLTTWNINSVRLRIELVAKFLKAQRPDVLCLQETKCPDDAFPAKRFKRLGYEHIAL 59 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 GQK Y+GVA++SK + D++D + + L + N Y+P G I Sbjct: 60 NGQKGYHGVAVISKIPFLATDIRTFCDNIDSRHISVSLQTGAADPPLLLHNFYVPAGGDI 119 Query: 120 T----STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + K+ K+S++ A + I GD N+ P HD ++ Sbjct: 120 PDPEANPKFKHKLSFLDEMRACAPLHPSGDARHILVGDLNVAPHEHDVWSHKQLLKVVSH 179 Query: 176 TL-EVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWS-KNKGIRIDHIMLSPEA 232 T E + + D R + +Y++W Y A W+ ++G R+DHI +S Sbjct: 180 TPVECDKLLAVQAAGNWVDVARERIPLSEKIYTWWSYRAADWTIGDRGRRLDHIWVSEAL 239 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + + +I R W +PSDH PV V++++ Sbjct: 240 RARVTDFKILRDARSWERPSDHVPVTVTMEL 270 >gi|254282366|ref|ZP_04957334.1| exodeoxyribonuclease III [gamma proteobacterium NOR51-B] gi|219678569|gb|EED34918.1| exodeoxyribonuclease III [gamma proteobacterium NOR51-B] Length = 259 Score = 185 bits (469), Expect = 6e-45, Method: Composition-based stats. Identities = 64/265 (24%), Positives = 115/265 (43%), Gaps = 13/265 (4%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + V T N N IRA +W+ + D++C+QETK +++ + YH Sbjct: 1 MRVITCNTNGIRAAERKGFFSWLGQQGADVVCIQETKAQEQQLTDDAFYPEGYHCFYNDA 60 Query: 62 -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+G A+ + +P ++T L D D + R+++A F + + +LYLP G+ Sbjct: 61 EKKGYSGTALYCRSKPQRVITSLGWDPADSEGRYLQADFPG----ISVVSLYLPSGS-SG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EV 179 + K ++ F I D+NI + D N ++ F E Sbjct: 116 DERQVRKEVFMDAFFDHLKALRRKRREFIICADWNICHREIDLKNWRANRKNSGFLPHER 175 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + +G+ D+ R + Y++W +W+KN G R+D+++++P SA Sbjct: 176 AWLDRVFDELGYVDSFRRVNPEPDQYTWWSNRGQAWAKNVGWRLDYMLVTPGLADAATSA 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIP 264 I + R SDH P+ + I Sbjct: 236 SIYREER----FSDHAPLTLDFAID 256 >gi|148245026|ref|YP_001219720.1| exodeoxyribonuclease III [Candidatus Vesicomyosocius okutanii HA] gi|146326853|dbj|BAF61996.1| exodeoxyribonuclease III [Candidatus Vesicomyosocius okutanii HA] Length = 256 Score = 185 bits (469), Expect = 6e-45, Method: Composition-based stats. Identities = 66/265 (24%), Positives = 112/265 (42%), Gaps = 13/265 (4%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC- 60 ++ + T NVN IRA WIK N D++CLQE K ++ E YH Sbjct: 1 MIRIITTNVNGIRAAERKGFLNWIKNQNADVVCLQEIKATEEQLD-ERFYPEEYHCYYQP 59 Query: 61 -GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G I +K PI+++ + F +N + + ++Y+ G+ Sbjct: 60 AQKKGYSGTTIFTKQTPIQVIK----ESPWKDINFEGRFIQVNFKNFSVISIYIHSGSAK 115 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + + +RF+ + + +I GD NI+ Q D N + ++ E Sbjct: 116 QARQNLKMEFLTERFMPYLQELKISGRKVIICGDMNIVHQERDIKNWKANQKNSGCLPEE 175 Query: 180 RQSFQK-LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R K +GF D R + Y++W +W+ N G RID+ +L+P + + Sbjct: 176 RAWLDKLFFKVGFIDGFREVNQEDQQYTWWSNRGQAWANNIGWRIDYQILTPNLKGKVKN 235 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263 A I R SDH P+I+ + Sbjct: 236 ANIYKNKR----FSDHAPIIMDYQL 256 >gi|323340218|ref|ZP_08080482.1| exodeoxyribonuclease III [Lactobacillus ruminis ATCC 25644] gi|323092409|gb|EFZ35017.1| exodeoxyribonuclease III [Lactobacillus ruminis ATCC 25644] Length = 254 Score = 185 bits (469), Expect = 6e-45, Method: Composition-based stats. Identities = 65/259 (25%), Positives = 111/259 (42%), Gaps = 13/259 (5%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + N + ++ + D C+QETK ++ + L + + + Sbjct: 1 MNFVSWNVNGLRAVLKKNFSEVFEKLDADFFCIQETKLQEGQVELD-LPGYHQYWNYAER 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K++P + + + D + R I + + N Sbjct: 60 KGYSGTAIFTKHEPQSVSYGIHNSEFDHEGRVITLEYA------SFYLVCCYSPNSQPKL 113 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K D + L+ ++P+I GD N+ + D NP +A F+ E R Sbjct: 114 KRLDFRMGFEDAFLNYLNDLKEKKPVIMCGDLNVAHEEIDLKNPKTNHRNAGFSNEERSC 173 Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +L G+ D R H +YS+W Y ++ N G RID+ ++S L +A I Sbjct: 174 MTRLLENGYLDTFRFFHPDETGIYSWWSYRFNARKNNAGWRIDYFIVSESLKDSLENAEI 233 Query: 242 DTKPRGWTKPSDHTPVIVS 260 T G SDH PV++ Sbjct: 234 LTDIMG----SDHCPVLLE 248 >gi|188993425|ref|YP_001905435.1| exodeoxyribonuclease III [Xanthomonas campestris pv. campestris str. B100] gi|167735185|emb|CAP53397.1| exodeoxyribonuclease III [Xanthomonas campestris pv. campestris] Length = 296 Score = 185 bits (469), Expect = 6e-45, Method: Composition-based stats. Identities = 64/275 (23%), Positives = 112/275 (40%), Gaps = 24/275 (8%) Query: 2 SVVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 +++ + ++N N +R A W + D++C+QETK ++ Y Sbjct: 29 ALMRIISFNANGLRSAASKGFFEWFATQDADVLCIQETKAQEHQLAGPEFLPAGYKAWFR 88 Query: 61 G---QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 +K Y+GVAI +K +P E+ T L + D + R+IEA F L + + Y+P G+ Sbjct: 89 DASTKKGYSGVAIYAKREPDEVRTALGWPEFDEEGRYIEARFG----NLSVVSFYIPSGS 144 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + K ++ S+ L + GD+NI+ D N + ++ Sbjct: 145 -SGELRQGYKFQVMEWLRPILSEWLASGRQYVLCGDWNIVRSALDIKNWKSNQKNSGCLP 203 Query: 178 EVRQSFQKLQN-----------MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226 R L G+ D+ R H Y++W + + N G RID+ Sbjct: 204 PERDWLNGLCADLLDEADASNGRGWVDSYRVLHPQGEDYTWWSNRGAARANNVGWRIDYQ 263 Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +++P + + I + R SDH P IV Sbjct: 264 LVTPGLRDKVQACSIYREQR----FSDHAPYIVDY 294 >gi|33519889|ref|NP_878721.1| exonuclease III [Candidatus Blochmannia floridanus] gi|33504234|emb|CAD83497.1| exodeoxyribonuclease III [Candidatus Blochmannia floridanus] Length = 267 Score = 185 bits (469), Expect = 6e-45, Method: Composition-based stats. Identities = 85/267 (31%), Positives = 117/267 (43%), Gaps = 7/267 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RA +H L A I + PD+I LQETK D FP + ++ Y++ GQK Sbjct: 1 MRFVSFNINGLRAHMHQLDALITQLKPDVIGLQETKVHDDIFPVKIIEQYGYYVHFYGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 Y GVA L KY PI + D L Q R I A L I N Y P G S K Sbjct: 61 KYYGVAFLFKYPPITVTQGNVYDSLSSQKRTIIAQIVTKIGILTIINCYCPQGENYHSNK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACFTL 177 + K + + + + L+ GD NI P D I F Sbjct: 121 FLFKRQFFQNLQHYIENTYNNQSILLIMGDLNISPTDLDVGISEQNKKRWIKSGKCSFLP 180 Query: 178 EVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 E R L G D R + + YS++ Y D + KNKG+RID I+++ +L Sbjct: 181 EERSWIHSLMKWGLIDIYRKNNPYNNKRYSWFSYKYDGFHKNKGLRIDLILVTQPLENLY 240 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263 + I RG SDH P+ V DI Sbjct: 241 INGDISYDIRGMPNSSDHAPIWVDFDI 267 >gi|303241137|ref|ZP_07327646.1| exodeoxyribonuclease III Xth [Acetivibrio cellulolyticus CD2] gi|302591397|gb|EFL61136.1| exodeoxyribonuclease III Xth [Acetivibrio cellulolyticus CD2] Length = 251 Score = 185 bits (469), Expect = 6e-45, Method: Composition-based stats. Identities = 68/262 (25%), Positives = 114/262 (43%), Gaps = 13/262 (4%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ + +WNVN IRA + + ++ + DI C+QETK ++ + + Sbjct: 1 MLKMISWNVNGIRAVMGKGFTDFFQKEDADIFCIQETKVQEGQIEI-PFEGYYKYWNYAE 59 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+GVA+ +K +PI + + ++ D + R I F + + G Sbjct: 60 KKGYSGVAVFTKIKPITVSYGIGIEEHDKEGRVITLEFDEY-YVVTVYTPNSQRGLTRL- 117 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + + LE +P+I GD N+ + D NP + +A FT E R Sbjct: 118 ----HYRMKWEDDFLSYLKSLERYKPVIVCGDLNVAHKEIDLKNPQSNKKNAGFTEEERS 173 Query: 182 SFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 F N GF D R + +Y++W Y +S N G RID+ ++S L A Sbjct: 174 KFDSYVNNGFIDTFRYFYPDRIGVYTWWSYMFNSRQNNAGWRIDYFIVSERIKDRLKDAL 233 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 + ++ G SDH PV + LD Sbjct: 234 VYSEITG----SDHCPVGILLD 251 >gi|329930518|ref|ZP_08284058.1| exodeoxyribonuclease III [Paenibacillus sp. HGF5] gi|328934896|gb|EGG31386.1| exodeoxyribonuclease III [Paenibacillus sp. HGF5] Length = 250 Score = 185 bits (469), Expect = 6e-45, Method: Composition-based stats. Identities = 68/261 (26%), Positives = 109/261 (41%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + E + DI C+QETK + + + + Sbjct: 1 MKLVSWNVNGLRACVTKGFMDYFNEADADIFCVQETKLQAGQIELDLGPEYQQYWNYAEK 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G A+ ++ P+ + L D + N + Sbjct: 61 KGYSGTAVFTRIAPLSVRYGLEEDSEPEGRVITLEFEDFYLVNVYTPNA------KRDLS 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + D ++ W +RF + Q L+ +P+I GD N+ Q D N ++ FTLE R Sbjct: 115 RLDYRLEWEERFRTYLLQ-LDERKPVIVCGDLNVAHQEIDLKNAKSNHGNSGFTLEERGK 173 Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 L GF D+ R + +YS+W Y A +N G RID+ + S L A I Sbjct: 174 MTDLLAAGFIDSFRHFYPDRTDVYSWWSYMAKVRERNIGWRIDYFLTSARLAEKLKDAEI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 D G SDH PV ++L+ Sbjct: 234 DCHVLG----SDHCPVSLTLE 250 >gi|229816298|ref|ZP_04446607.1| hypothetical protein COLINT_03350 [Collinsella intestinalis DSM 13280] gi|229808149|gb|EEP43942.1| hypothetical protein COLINT_03350 [Collinsella intestinalis DSM 13280] Length = 280 Score = 185 bits (469), Expect = 6e-45, Method: Composition-based stats. Identities = 61/277 (22%), Positives = 110/277 (39%), Gaps = 22/277 (7%) Query: 4 VTVATWNVNSIRARIHN---LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 + +A+WNVN +RA + + E + DI+ LQETK ++ + L + Sbjct: 9 LKLASWNVNGLRAVLKKDPSFTDIVAELDADILGLQETKLQEGQVELD-LPGYHQVWSYA 67 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT-------------FTINTQTLR 107 +K Y+G A+ + +P+ + A + + + Sbjct: 68 ERKGYSGTAVFCREEPLSVRHADAVLAAGRAAGLSDDELELVAVAATEGRVCALEFERFW 127 Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167 ++Y P+ + S E +P++ GD+N+ D NP Sbjct: 128 FVDVYTPNAQGELARLSTRMAWDDAYRAFLRSLEDETGKPVVTCGDFNVAHNEIDLKNPK 187 Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHI 226 +A F+ E R F +L + G+TD RA + YS+W Y ++ N G RID+ Sbjct: 188 SNRGNAGFSDEERAKFGELLDAGYTDTFRAANPNLEGAYSWWSYRFNARKNNAGWRIDYF 247 Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 ++S + + I G SDH PV + +++ Sbjct: 248 LVSDAIADRVRACGIRNDIFG----SDHCPVTLEIEL 280 >gi|182438103|ref|YP_001825822.1| putative exodeoxyribonuclease [Streptomyces griseus subsp. griseus NBRC 13350] gi|178466619|dbj|BAG21139.1| putative exodeoxyribonuclease [Streptomyces griseus subsp. griseus NBRC 13350] Length = 271 Score = 185 bits (469), Expect = 7e-45, Method: Composition-based stats. Identities = 57/270 (21%), Positives = 100/270 (37%), Gaps = 10/270 (3%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++TV + NVN +RA W+ + D++CLQE + E P +H Sbjct: 1 MLTVTSVNVNGLRAAAKKGFVEWLAGTDADVVCLQEVRAELAQLPEGVGAPEGWHTVHAP 60 Query: 62 Q--KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIE--ATFTINTQTLRIGNLYLPHGN 117 K GV++ S+ P G + F I+ + + +LYLP G Sbjct: 61 AAAKGRAGVSLYSRQAPERTQIGFGGFGVPGAEEFDASGRYAEIDLPGVTVASLYLPSGE 120 Query: 118 PITSTKYD---DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 T + + +++ ++ ++ GD+NI + D N + Sbjct: 121 VGTERQDEKERFMAAFLPYLQGLKARAAADGREVVVCGDWNIAHREADLKNWKANRKSSG 180 Query: 175 FTLEVRQSFQKLQNMGFTDAIRA--THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 F E R ++ + D YS+W Y ++ + G RID+ M +P Sbjct: 181 FLPEERAWLTRVLEEAAYVDVVRALHPDVEGPYSWWSYRGRAFDNDSGWRIDYQMATPGL 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 A ++ + SDH PV V + Sbjct: 241 AGRAVKAWVERAATHGERWSDHAPVTVVYE 270 >gi|157804057|ref|YP_001492606.1| exodeoxyribonuclease VII large subunit [Rickettsia canadensis str. McKiel] gi|157785320|gb|ABV73821.1| exodeoxyribonuclease VII large subunit [Rickettsia canadensis str. McKiel] Length = 260 Score = 185 bits (469), Expect = 7e-45, Method: Composition-based stats. Identities = 92/259 (35%), Positives = 142/259 (54%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+NSI+ R++ L ++ + NPDI+ LQE K E + F F+ L L Y++ GQK Sbjct: 1 MKIATWNINSIKTRLNLLRNFLSKENPDILLLQEIKCETEKFLFDELSDLPYNLYVHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVAI+SK+ EI+ P + QARF+E ++ I +LY PHG+ + S K Sbjct: 61 TYNGVAIISKFPANEIIKDFPNNYCSDQARFLEIKLSLPIGLCNIISLYAPHGSFVGSDK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+++ + + + S + +E I GD+NI P D Y+P CFT ++ Sbjct: 121 FVTKLAFYESLINYLSTKKSFDEKTIIGGDFNIAPFDIDVYSPKALAETTCFTKVEQKKL 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + + N F D R + +S+WDY A + +NKG+RID I+ L + +D Sbjct: 181 RTILNSRFEDLYRLMYPNKQEFSWWDYRAGCFEQNKGMRIDMILGCNNTIDYLENCYMDY 240 Query: 244 KPRGWTKPSDHTPVIVSLD 262 R KPSDH PVI + Sbjct: 241 NLRTQEKPSDHIPVIANFK 259 >gi|229031365|ref|ZP_04187367.1| Exodeoxyribonuclease [Bacillus cereus AH1271] gi|228729930|gb|EEL80908.1| Exodeoxyribonuclease [Bacillus cereus AH1271] Length = 252 Score = 185 bits (469), Expect = 7e-45, Method: Composition-based stats. Identities = 68/262 (25%), Positives = 120/262 (45%), Gaps = 14/262 (5%) Query: 4 VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + +WNVN +RA +++E+N DI CLQE K +D + + Sbjct: 1 MKLISWNVNGLRAVIAKGGFLEYLEESNADIFCLQEIKLQDGQIDLNP-EGYYTYWNYAV 59 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G AI SK +P+ + L ++ D + R I F + Sbjct: 60 KKGYSGTAIFSKQEPLSVTYGLGIEEHDQEGRVITVEFEGFYMI-----TLYTPNSKRGL 114 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + D ++ W F + + L+ ++P+IF GD N+ + D NP + F+ E R+ Sbjct: 115 ERLDYRMKWEDDFRAYIKR-LDEKKPVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEERE 173 Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 F ++ GF D R + YS+W Y + +KN G R+D+ ++S + A+ Sbjct: 174 KFTRILEEGFIDTYRYLYPDQEGAYSWWSYRMGARAKNIGWRLDYFVVSERMKDKITEAK 233 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I+++ G SDH PV + ++ Sbjct: 234 INSEVMG----SDHCPVELHIN 251 >gi|297193885|ref|ZP_06911283.1| exodeoxyribonuclease [Streptomyces pristinaespiralis ATCC 25486] gi|197720247|gb|EDY64155.1| exodeoxyribonuclease [Streptomyces pristinaespiralis ATCC 25486] Length = 277 Score = 185 bits (469), Expect = 7e-45, Method: Composition-based stats. Identities = 52/265 (19%), Positives = 95/265 (35%), Gaps = 6/265 (2%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++TV + NVN +RA W+ D++CLQE + E P E Sbjct: 13 MLTVTSVNVNGLRAAAKKGFVEWLATTAADVVCLQEVRAEADQLPPEVRNPDGRFTVYAP 72 Query: 62 Q--KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 K GVA+ ++ +P + + D R++EA T + G Sbjct: 73 AAAKGRAGVALFTRREPDAVRIGFGSSEFDGSGRYVEADLPGVTVA-SLYLPSGEVGTER 131 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K ++ ++ ++ GD+NI D N ++ F E Sbjct: 132 QDEKMRFMSEFLPYLKELRARSAADGREVVVCGDWNIAHHEADLKNWKSNRKNSGFLPEE 191 Query: 180 RQSFQKLQNMGFTDAIRA--THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 R+ ++ + + D Y++W Y ++ + G RID+ + +P Sbjct: 192 REWLGRVFSEAEYVDVVRDLHPDQEGPYTWWSYRGRAFDNDSGWRIDYQVATPGLARRAV 251 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLD 262 A ++ + SDH PV + Sbjct: 252 KAWVERAATHGERWSDHAPVTAVYE 276 >gi|257877428|ref|ZP_05657081.1| exodeoxyribonuclease [Enterococcus casseliflavus EC20] gi|325568814|ref|ZP_08145107.1| exodeoxyribonuclease III [Enterococcus casseliflavus ATCC 12755] gi|257811594|gb|EEV40414.1| exodeoxyribonuclease [Enterococcus casseliflavus EC20] gi|325157852|gb|EGC70008.1| exodeoxyribonuclease III [Enterococcus casseliflavus ATCC 12755] Length = 250 Score = 185 bits (469), Expect = 7e-45, Method: Composition-based stats. Identities = 70/261 (26%), Positives = 116/261 (44%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA N + + + D CLQETK ++ + L + + + Sbjct: 1 MKFISWNVNGLRAIVKKNFSEVFEALDADFFCLQETKLQEGQIELD-LPGYHQYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K + + L ++ D + R I + + Sbjct: 60 KGYSGTAIFAKEPALSVRYGLGIEEHDTEGRVITLEYPEF-----FLITCYTPNSQNELR 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + D +++W FL + L+ ++P+I GD N+ + D N + A FT E R+ Sbjct: 115 RLDYRMTWEDAFLAY-LTELKQQKPVILCGDLNVAHKNIDIKNWKTNQKSAGFTPEEREK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F L GFTD R + +YS+W Y ++ N G RID+ ++S + L A+I Sbjct: 174 FSTLLAAGFTDTFRYFYPDAEGIYSWWSYRFNARKNNAGWRIDYFVVSDDLNERLLDAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 T G SDH PV + L+ Sbjct: 234 HTDIIG----SDHCPVELDLN 250 >gi|331002672|ref|ZP_08326187.1| exodeoxyribonuclease [Lachnospiraceae oral taxon 107 str. F0167] gi|330407085|gb|EGG86589.1| exodeoxyribonuclease [Lachnospiraceae oral taxon 107 str. F0167] Length = 262 Score = 185 bits (469), Expect = 7e-45, Method: Composition-based stats. Identities = 70/261 (26%), Positives = 124/261 (47%), Gaps = 13/261 (4%) Query: 5 TVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +WNVN +RA + + ++ + DI C+QE+K + + +Y +K Sbjct: 13 KMISWNVNGLRAAVTKGFLDFFRDIDADIFCIQESKLSEGQIELDLPGYYDY-WNYAAKK 71 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 Y+GVA+ +K +PI + + ++ D + R I A + + T+ Sbjct: 72 GYSGVAVFTKDKPIGVTYGIGIEEHDNEGRVITAEYDDFYLI-----TCYTPNSQRGLTR 126 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 D +++W FL + + LE ++P+IF GD N+ + D NP +A FT E R Sbjct: 127 LDYRMAWEDAFLDYVLK-LEEKKPVIFCGDLNVAHKEIDLKNPKTNRKNAGFTDEERGKM 185 Query: 184 QKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 + + GF D+ R + YS+W Y + +KN G RID+ ++S + + A+I Sbjct: 186 DIVLSSGFADSFRVLYPDKEGAYSWWSYMGGARAKNVGWRIDYFIVSDKLKDRIKEAKIH 245 Query: 243 TKPRGWTKPSDHTPVIVSLDI 263 + G SDH PV + ++I Sbjct: 246 SDILG----SDHCPVELDIEI 262 >gi|266623165|ref|ZP_06116100.1| exodeoxyribonuclease III [Clostridium hathewayi DSM 13479] gi|288865076|gb|EFC97374.1| exodeoxyribonuclease III [Clostridium hathewayi DSM 13479] Length = 251 Score = 185 bits (469), Expect = 7e-45, Method: Composition-based stats. Identities = 76/260 (29%), Positives = 121/260 (46%), Gaps = 13/260 (5%) Query: 5 TVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +WNVN +RA + + KE + DI C+QE+K + E L + + +K Sbjct: 3 KLISWNVNGLRACVGKGFLDYFKEVDADIFCIQESKLSEGQIELE-LSGYHQYWNYAEKK 61 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 Y+G A+ +K +P+ + + ++ D + R I A F+ + + Sbjct: 62 GYSGTAMFTKEEPLSVAYGIGIEEHDHEGRVITAEFSD-----YYVVTCYTPNSKDGLAR 116 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 ++ W FLR+ LE ++P+IF GD N+ + D NP +A FT E R F Sbjct: 117 LPYRMVWEDAFLRYLKG-LEEKKPVIFCGDLNVAHKEIDLKNPKTNRKNAGFTDEERGKF 175 Query: 184 QKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 L + GF D R + +YS+W Y + SKN G RID+ +S L SA I Sbjct: 176 TDLLDAGFIDTFRWFYPDREEIYSWWSYRFSARSKNAGWRIDYFCVSEALKDRLVSADIH 235 Query: 243 TKPRGWTKPSDHTPVIVSLD 262 T+ G SDH PV + ++ Sbjct: 236 TEVLG----SDHCPVELVIE 251 >gi|251794788|ref|YP_003009519.1| exodeoxyribonuclease III Xth [Paenibacillus sp. JDR-2] gi|247542414|gb|ACS99432.1| exodeoxyribonuclease III Xth [Paenibacillus sp. JDR-2] Length = 258 Score = 185 bits (469), Expect = 7e-45, Method: Composition-based stats. Identities = 70/261 (26%), Positives = 118/261 (45%), Gaps = 12/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + + E + D CLQETK ++ E ++ + + Sbjct: 1 MKFVSWNVNGLRASVNKGFLDYFNEMDADFFCLQETKLQEGQIKLELGEAYHLFWHYAEK 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K++P+ I L +D D + R I + + +Y P+ S Sbjct: 61 KGYSGTAIFTKHKPLSISYGLGEEDEDTEGRVITLEYE----NFYLVTVYTPNARRDLSR 116 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 D + R +L+ +P+I GD N+ Q D N ++ FT E R+ Sbjct: 117 L--DFRLAWEEMFRGYLIKLDEHKPVIVCGDLNVAHQDIDLKNAKSNRGNSGFTDEEREK 174 Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +L + GF D+ R + Y++W + +N G RID+ + S + A I Sbjct: 175 MTRLLDAGFIDSFRYLYPDRTDAYTWWSFMPKIRERNVGWRIDYFLASARLAPAIVEAGI 234 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 D++ G SDH PV+++LD Sbjct: 235 DSQILG----SDHCPVVLTLD 251 >gi|221218058|ref|ZP_03589524.1| exodeoxyribonuclease III [Borrelia burgdorferi 72a] gi|224533538|ref|ZP_03674127.1| exodeoxyribonuclease III [Borrelia burgdorferi CA-11.2a] gi|225549668|ref|ZP_03770634.1| exodeoxyribonuclease III [Borrelia burgdorferi 118a] gi|221192006|gb|EEE18227.1| exodeoxyribonuclease III [Borrelia burgdorferi 72a] gi|224513211|gb|EEF83573.1| exodeoxyribonuclease III [Borrelia burgdorferi CA-11.2a] gi|225369945|gb|EEG99392.1| exodeoxyribonuclease III [Borrelia burgdorferi 118a] gi|312149695|gb|ADQ29766.1| exodeoxyribonuclease III [Borrelia burgdorferi N40] Length = 255 Score = 185 bits (469), Expect = 7e-45, Method: Composition-based stats. Identities = 58/260 (22%), Positives = 104/260 (40%), Gaps = 12/260 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFE-TLQSLNYHIETCG 61 + + +WNVN IRA + ++KE PDI+C+QETK + P + ++ + Sbjct: 1 MKLISWNVNGIRAVLKKGFLEFVKEYTPDILCIQETKALREQLPKDLIFENYYSYFSNSK 60 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 K Y+GV I SK +PI + + + I + + Sbjct: 61 IKGYSGVCIYSKVEPISVRLLGEEIFDNEGRGLVACYDDF------ILVNGYFPNSQVLR 114 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + K+ ++ A + + ++ GD+NI D +P + + +E Sbjct: 115 RRLGYKLDFLSYVENLADSLVCDGKNVVICGDFNIAHTEIDLISPDSNRDSPGYYIEETT 174 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 N G+ D R + Y++W Y + +N G RID+ +++ + + I Sbjct: 175 WLDDFLNKGYVDTFRIFNKDPGYYTWWSYRTRARERNMGWRIDYFIVNEFFKRNVEKSLI 234 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 K G SDH PV + L Sbjct: 235 LDKVMG----SDHCPVFLEL 250 >gi|255523264|ref|ZP_05390235.1| exodeoxyribonuclease III Xth [Clostridium carboxidivorans P7] gi|296186225|ref|ZP_06854630.1| exodeoxyribonuclease III [Clostridium carboxidivorans P7] gi|255513132|gb|EET89401.1| exodeoxyribonuclease III Xth [Clostridium carboxidivorans P7] gi|296049493|gb|EFG88922.1| exodeoxyribonuclease III [Clostridium carboxidivorans P7] Length = 252 Score = 185 bits (469), Expect = 7e-45, Method: Composition-based stats. Identities = 70/260 (26%), Positives = 112/260 (43%), Gaps = 13/260 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + KE N DI C+QE+K ++ E L+ + + + Sbjct: 1 MKLISWNVNGLRACVTKGFLEFFKEVNADIFCIQESKLQEGQIELE-LEGYHQYWNYAER 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +P+ + ++ D + R I F + Sbjct: 60 KGYSGTAIFTKKKPLSFTYGIGIEEHDKEGRVITLEFDDFYMVTVYTPNSKDQLARLEYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + R + LE +P+I GD N+ + D NP +A FT E R+ Sbjct: 120 M------KWENDFRDYLKSLEKNKPVIMCGDLNVAHKEIDLKNPKTNRKNAGFTDEEREK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F + + GF D R + YS+W Y ++ N G RID+ +S L SA I Sbjct: 174 FTEFLSAGFIDTYRYFNPDKEGAYSWWSYRFNARKNNAGWRIDYFCVSDCLKERLVSADI 233 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 T+ G SDH PV + + Sbjct: 234 HTEVMG----SDHCPVELVI 249 >gi|39933358|ref|NP_945634.1| exodeoxyribonuclease III [Rhodopseudomonas palustris CGA009] gi|39652983|emb|CAE25725.1| possible exodeoxyribonuclease III [Rhodopseudomonas palustris CGA009] Length = 270 Score = 185 bits (469), Expect = 7e-45, Method: Composition-based stats. Identities = 79/268 (29%), Positives = 128/268 (47%), Gaps = 8/268 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62 +T+ TWN+NS+R RI +A ++K PDI+CLQETK D FP + + L Y HI GQ Sbjct: 3 LTLTTWNINSVRLRIDLVAKFLKAQRPDILCLQETKCPDDAFPLKRFKRLGYEHIALNGQ 62 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT-- 120 K Y+GVA++SK + D +D + + N L + N Y+P G I Sbjct: 63 KGYHGVAVISKLPFVTTDIRTFCDIIDSRHISVSVKTDENAPPLVLHNFYVPAGGDIPDP 122 Query: 121 --STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL- 177 + K+ K+S++ ++ I GD N+ P HD ++ T Sbjct: 123 AVNPKFKHKLSFLDEMKACEPLHPSGDQRHILVGDLNVAPHEHDVWSHKQLLKVVSHTPV 182 Query: 178 EVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSL 235 E + L+ + D R +Y++W Y A W+ ++G R+DHI +S Sbjct: 183 ECEKLLAVLRAGNWVDVARERIPLDQKVYTWWSYRAADWTVGDRGRRLDHIWVSEALKDR 242 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + ++ R W +PSDH PV +++++ Sbjct: 243 VVDFKVLRDARSWERPSDHVPVTMTMEL 270 >gi|206558889|ref|YP_002229649.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia cenocepacia J2315] gi|198034926|emb|CAR50798.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia cenocepacia J2315] Length = 257 Score = 185 bits (469), Expect = 7e-45, Method: Composition-based stats. Identities = 63/264 (23%), Positives = 114/264 (43%), Gaps = 14/264 (5%) Query: 3 VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59 ++ V T N+N IR A W+ E N D +C+QE K + P E ++ + + Sbjct: 1 MMRVITANLNGIRSAAKKGFFDWLGEQNADCVCVQEIKVSADDLPAEFVEPHGFKSYFHH 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G + S+ +P +++ + D + R++EA + L + ++Y+P G+ Sbjct: 61 AEKKGYSGAGVYSRREPDDVIIGFGSSEFDPEGRYVEARYG----KLSVVSVYVPSGSSG 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + L+ + +I GD NI+ + D N + ++ E Sbjct: 117 EERQQA--KYRFMAEFMPHLAALKKKREVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEE 174 Query: 180 RQSFQK-LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R+ K ++G+ D R Y++W +++KN G RID+ + +P S Sbjct: 175 REWLTKLFDDVGYVDVFRTLDPRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGVAGTAKS 234 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 A I K SDH P+ V D Sbjct: 235 ASIFKDI----KFSDHAPLTVDYD 254 >gi|323136205|ref|ZP_08071287.1| exodeoxyribonuclease III Xth [Methylocystis sp. ATCC 49242] gi|322398279|gb|EFY00799.1| exodeoxyribonuclease III Xth [Methylocystis sp. ATCC 49242] Length = 266 Score = 184 bits (468), Expect = 7e-45, Method: Composition-based stats. Identities = 74/264 (28%), Positives = 120/264 (45%), Gaps = 6/264 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62 + + TWN+NS+R R+ +A ++K PD++CLQETK D FP + +L Y H+ GQ Sbjct: 1 MKITTWNINSVRLRMPLVAHFLKTRAPDVLCLQETKCRDAEFPMKDFHALGYRHVAINGQ 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR--IGNLYLPHGNPIT 120 K Y+GVA++SK + + D + +E L + Sbjct: 61 KGYHGVAVVSKKPLRFVEKRDFCEKGDARHIAVEIEAKSGPIMLHNFYVPAGGDEPDVEI 120 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EV 179 + K+ K+ ++ + + + GD NI P HD ++ T EV Sbjct: 121 NPKFAHKLDFLDEMKSWIETEGVTKGRVALVGDLNIAPLEHDVWSHKALLKVVSHTPVEV 180 Query: 180 RQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLLH 237 + + + DA+R LY++W Y A W + N+G R+DHI++S L Sbjct: 181 EKLTDVFRAGRWIDAMRHFVPADEKLYTWWSYRAADWAASNRGRRLDHILVSEALGGALS 240 Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261 + + RGW +PSDH PV + L Sbjct: 241 RLDVLQEARGWERPSDHVPVTIEL 264 >gi|241888975|ref|ZP_04776279.1| exodeoxyribonuclease III [Gemella haemolysans ATCC 10379] gi|241864224|gb|EER68602.1| exodeoxyribonuclease III [Gemella haemolysans ATCC 10379] Length = 254 Score = 184 bits (468), Expect = 8e-45, Method: Composition-based stats. Identities = 67/261 (25%), Positives = 112/261 (42%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + ++NVN +RA + N K+ + D CLQETK + + + + Sbjct: 1 MKCISFNVNGLRAIVGKNFEEDFKQLDADFFCLQETKMQAGQLDLQ-FDGYYSYFNYAER 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K++P+ + + ++ D + R I + + I G+ + Sbjct: 60 KGYSGTAIYTKHEPLNVTYGIGIEEHDTEGRVITLEY---DKFFFITVYTPNSGSELKRL 116 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 +Y + + L + ++ GD N+ D NP +A FT E R+ Sbjct: 117 EYR---MSWEEDFKNYLLALNKTKGVVVCGDLNVAHTEIDLKNPKSNMKNAGFTPEEREK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F KL + GF D R + YS+W Y ++ N G RID+ ++S + L SA I Sbjct: 174 FTKLLDAGFIDTFRYYNPDLTGAYSWWSYRFNARKNNAGWRIDYFLVSRDLEEYLESAAI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 + G SDH PV + L Sbjct: 234 HNEIFG----SDHCPVELVLK 250 >gi|210622632|ref|ZP_03293292.1| hypothetical protein CLOHIR_01240 [Clostridium hiranonis DSM 13275] gi|210154133|gb|EEA85139.1| hypothetical protein CLOHIR_01240 [Clostridium hiranonis DSM 13275] Length = 250 Score = 184 bits (468), Expect = 8e-45, Method: Composition-based stats. Identities = 68/261 (26%), Positives = 112/261 (42%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + + E + DI CLQETK ++ + + + Sbjct: 1 MKFISWNVNGLRACVTKGFMDFFNEVDADIFCLQETKLQEGQIDLNP-EGYESYWNYADK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +P+ + + D+ D + R I F +Y P+ Sbjct: 60 KGYSGTAIFTKKKPLSVAYGIGIDEHDHEGRVITLEFE----DFYFVTVYTPNSQTELKR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + R + L+ ++P++ GD N+ + D NP +A FT E R Sbjct: 116 L--EYRMRWEDDFRAYLKNLDSKKPVVMCGDLNVAHKEIDLKNPKTNRKNAGFTDEERNK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F + GF D R + +YS+W Y ++ N G RID+ S L SA+I Sbjct: 174 FTEFLESGFIDTFRYFYPDAEGMYSWWSYRFNARKNNAGWRIDYFCTSESMKDRLVSAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 + G SDH PV + ++ Sbjct: 234 HNEVLG----SDHCPVELVIE 250 >gi|260589662|ref|ZP_05855575.1| exodeoxyribonuclease III [Blautia hansenii DSM 20583] gi|331083093|ref|ZP_08332210.1| exodeoxyribonuclease [Lachnospiraceae bacterium 6_1_63FAA] gi|260539902|gb|EEX20471.1| exodeoxyribonuclease III [Blautia hansenii DSM 20583] gi|330405095|gb|EGG84632.1| exodeoxyribonuclease [Lachnospiraceae bacterium 6_1_63FAA] Length = 251 Score = 184 bits (468), Expect = 8e-45, Method: Composition-based stats. Identities = 70/262 (26%), Positives = 115/262 (43%), Gaps = 13/262 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + + ++ + D C+QETK ++ FE + + + Sbjct: 1 MKFISWNVNGLRACVKKGFTEFFEQTDADFFCIQETKLQEGQIDFEP-EGYFCYWNYAVK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +P+ + + ++ D + R I + ++ Sbjct: 60 KGYSGTAIFAKKEPLSVQYGIGIEEHDQEGRVITLEYENFYMVTVYTPNSQSELARLSYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + R Q+L+ ++P+I GD N+ Q D NP ++A FT E R+ Sbjct: 120 MQ------WEDDFRAYLQQLDEKKPVIMCGDLNVAHQEIDLKNPKTNRHNAGFTDEEREK 173 Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F + GFTD R + +YS+W Y + KN G RID+ S L SA I Sbjct: 174 FTTFLDAGFTDTFRYFYPDKTEIYSWWSYRFKAREKNAGWRIDYFCTSKRLDEKLLSASI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 T G SDH PV V +++ Sbjct: 234 HTDIFG----SDHCPVEVQIEL 251 >gi|317497391|ref|ZP_07955713.1| exodeoxyribonuclease III [Lachnospiraceae bacterium 5_1_63FAA] gi|316895311|gb|EFV17471.1| exodeoxyribonuclease III [Lachnospiraceae bacterium 5_1_63FAA] Length = 250 Score = 184 bits (468), Expect = 8e-45, Method: Composition-based stats. Identities = 66/261 (25%), Positives = 111/261 (42%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN IRA + + E + DI C+QE+K ++ L + + + Sbjct: 1 MKFISWNVNGIRACVKKGFLDFFNETDADIFCIQESKMQEGQLDLN-LPEYHQYWNYAVK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G I +K +PI + L ++ D + R I F ++ Sbjct: 60 KGYSGTGIFTKEEPISVFYGLGIEEHDQEGRVITLEFKDYYFITVYTPNSQSELARLSYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + ++LE ++P+IF GD N+ + D NP +A FT E R+ Sbjct: 120 M------KWEEDFLAYLKKLEEKKPVIFCGDLNVAVEEIDLKNPKTNRKNAGFTDEEREK 173 Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 + + N GF D R + +YS+W Y ++ N G RID+ ++S + A+I Sbjct: 174 MRTILNNGFIDTFRYLYPDQTGIYSWWSYRFNARKNNAGWRIDYFIVSECLKDRISDAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 T G SDH P+ + Sbjct: 234 LTDVMG----SDHCPIELDFK 250 >gi|47568231|ref|ZP_00238934.1| exodeoxyribonuclease III [Bacillus cereus G9241] gi|228986876|ref|ZP_04147003.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|47555059|gb|EAL13407.1| exodeoxyribonuclease III [Bacillus cereus G9241] gi|228772825|gb|EEM21264.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 252 Score = 184 bits (468), Expect = 9e-45, Method: Composition-based stats. Identities = 73/262 (27%), Positives = 125/262 (47%), Gaps = 14/262 (5%) Query: 4 VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + +WNVN +RA +++E+N DI CLQE K +D L+ + Sbjct: 1 MKLISWNVNGLRAVIAKGGFLEYLEESNADIFCLQEIKLQDGQIDLN-LEEYYTYWNYAV 59 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G AI SK +P+ + L ++ D + R I F I LY P+ + Sbjct: 60 KKGYSGTAIFSKKEPLSVTYGLGIEEHDQEGRVITLEFE----DFYIITLYTPN-SKRGL 114 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + D ++ W F + + L+ ++P+IF GD N+ + D NP + F+ E R+ Sbjct: 115 ERLDYRMKWEDDFRVYIKR-LDEKKPVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEERE 173 Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 F + GF D R + YS+W Y + +KN G R+D+ ++S + A+ Sbjct: 174 KFTCILEEGFIDTYRYLYPNQEGAYSWWSYRMGARAKNIGWRLDYFVVSERMKDQITEAK 233 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I+++ G SDH PV + ++ Sbjct: 234 INSEVMG----SDHCPVELHIN 251 >gi|296330017|ref|ZP_06872501.1| apurinic/apyrimidinic endonuclease [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305676741|ref|YP_003868413.1| apurinic/apyrimidinic endonuclease [Bacillus subtilis subsp. spizizenii str. W23] gi|296153056|gb|EFG93921.1| apurinic/apyrimidinic endonuclease [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305414985|gb|ADM40104.1| apurinic/apyrimidinic endonuclease [Bacillus subtilis subsp. spizizenii str. W23] Length = 252 Score = 184 bits (468), Expect = 9e-45, Method: Composition-based stats. Identities = 74/265 (27%), Positives = 120/265 (45%), Gaps = 18/265 (6%) Query: 4 VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + +WNVN +RA + +++KE + DIICLQETK +D LQ YH+ Sbjct: 1 MKLISWNVNGLRAVMRKMDFLSYLKEEDADIICLQETKIQDGQVD---LQPDGYHVYWNY 57 Query: 62 --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G A+ SK +P+ ++ + ++ D + R I F I Sbjct: 58 AVKKGYSGTAVFSKQEPLRVMYGIGIEEHDQEGRVITLEFENLFVMTVYTPNSKRGLERI 117 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + L L+ ++P+I GD N+ Q D NP N+A F+ + Sbjct: 118 DYRMQ------WEEALLSYILELDKKKPVILCGDLNVAHQEIDLKNPKANRNNAGFSDQE 171 Query: 180 RQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R +F +L GF D+ R + YS+W Y A + +N G R+D+ ++S + Sbjct: 172 RGAFTRLLEAGFVDSFRHVYPDLEGAYSWWSYRAGARDRNIGWRLDYFVVSERLEEQIED 231 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263 A I G SDH PV + ++I Sbjct: 232 ASISADVMG----SDHCPVELMINI 252 >gi|317503938|ref|ZP_07961946.1| exodeoxyribonuclease III [Prevotella salivae DSM 15606] gi|315664964|gb|EFV04623.1| exodeoxyribonuclease III [Prevotella salivae DSM 15606] Length = 250 Score = 184 bits (468), Expect = 9e-45, Method: Composition-based stats. Identities = 69/261 (26%), Positives = 109/261 (41%), Gaps = 12/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + + + + N D CLQETK + + + + Sbjct: 1 MKFISWNVNGLRACVGKDFSQSFESLNADFFCLQETKMQAGQLELQ-FPGYTSYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI ++ +P+ + + D+ D + R I + + Sbjct: 60 KGYSGTAIYTRKEPLAVSYGIGIDEHDHEGRVITLEYDKFFLVTVYTPNAQEELRRLDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + +L+ ++P+I GD N+ Q D NP A FT E R Sbjct: 120 M------TWEDAFQAYLHQLDAKKPVIVCGDMNVAHQEIDLKNPKTNRRSAGFTDEERSK 173 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 +L + GFTD R H YS+W Y + KN G RID+ ++S L A I Sbjct: 174 MTQLLSNGFTDTFRTLHPEQITYSYWSYRFRAREKNAGWRIDYFLISDRLRPQLKGASIH 233 Query: 243 TKPRGWTKPSDHTPVIVSLDI 263 T+ G SDH PV + +DI Sbjct: 234 TEIYG----SDHCPVELDIDI 250 >gi|15604519|ref|NP_221037.1| exodeoxyribonuclease III (xthA2) [Rickettsia prowazekii str. Madrid E] gi|3861213|emb|CAA15113.1| EXODEOXYRIBONUCLEASE III (xthA2) [Rickettsia prowazekii] gi|292572307|gb|ADE30222.1| Exodeoxyribonuclease III [Rickettsia prowazekii Rp22] Length = 269 Score = 184 bits (468), Expect = 9e-45, Method: Composition-based stats. Identities = 95/258 (36%), Positives = 140/258 (54%), Gaps = 1/258 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+NSI+ R++ L ++ + NPDI+ LQE K E + FPF L L YH GQK Sbjct: 1 MKIATWNINSIKTRLNLLRNFLSKENPDILLLQEIKCETEKFPFNELSDLPYHFYVHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 SYNGVAI+SK+ +I+ + + QARF+E + I +LY P+G+ + S K Sbjct: 61 SYNGVAIISKFPADQIIKDFQNNYCNDQARFLEIKLSSPIGYSNIISLYAPNGSFVGSNK 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + +K+ + F+ + S + E I GD+NI P D Y+ ++ E C +E ++ Sbjct: 121 FVEKLKFYDNFINYLSTKKSCYEKTIIGGDFNIAPFDIDVYSKVLTETTCCTEVEQKKLR 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 L N GF D R H +S+WDY A + +NKG+RID I+ L +D Sbjct: 181 TIL-NSGFEDLYRLMHPDKQEFSWWDYRAGCFEQNKGMRIDMILGCNNTIDYLERCYMDY 239 Query: 244 KPRGWTKPSDHTPVIVSL 261 R KPSDH P+I S Sbjct: 240 NLRTQKKPSDHIPIIASF 257 >gi|218249629|ref|YP_002375040.1| exodeoxyribonuclease III [Borrelia burgdorferi ZS7] gi|218164817|gb|ACK74878.1| exodeoxyribonuclease III [Borrelia burgdorferi ZS7] Length = 255 Score = 184 bits (468), Expect = 9e-45, Method: Composition-based stats. Identities = 59/260 (22%), Positives = 104/260 (40%), Gaps = 12/260 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCG 61 + + +WNVN IRA + ++KE PDI+C+QETK + P + + Y + Sbjct: 1 MKLISWNVNGIRAVLKKGFLEFVKEYTPDILCIQETKALREQLPKDLILENYYSYFSNSK 60 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 K Y+GV I SK +PI + + + I + + Sbjct: 61 IKGYSGVCIYSKVEPISVRLLGEEIFDNEGRGLVACYDDF------ILVNGYFPNSQVLR 114 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + K+ ++ A + + ++ GD+NI D +P + + +E Sbjct: 115 RRLGYKLDFLFYVENLADSLVCDGKNVVICGDFNIAHTEIDLISPDSNRDSPGYYIEETT 174 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 N G+ D R + Y++W Y + +N G RID+ +++ + + I Sbjct: 175 WLDDFLNKGYVDTFRIFNKDPGYYTWWSYRTRARERNMGWRIDYFIVNEFFKRNVEKSLI 234 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 K G SDH PV + L Sbjct: 235 LDKVMG----SDHCPVFLEL 250 >gi|295704797|ref|YP_003597872.1| exodeoxyribonuclease III [Bacillus megaterium DSM 319] gi|294802456|gb|ADF39522.1| exodeoxyribonuclease III [Bacillus megaterium DSM 319] Length = 253 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 60/263 (22%), Positives = 107/263 (40%), Gaps = 14/263 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN IRA + + +E D+ C+QETK ++ + L+ + + Sbjct: 1 MKLISWNVNGIRACVRKGFLDYFQEVTADVFCIQETKLQEGQIDLQ-LEGYYQYWNYAVK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G A+ +K +P+ + + + D + N Sbjct: 60 KGYSGTAVFTKQKPLSVSFGVDKELEDEGRIITLEFEQCYVVNVYTPNSKRDLARLEERL 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 +++ L ++L + +I GD N+ D NP ++ FT+E R Sbjct: 120 QWE-------DDLLVYLKKLNSRKAVILCGDLNVAHAEIDLRNPKPNRGNSGFTIEERGK 172 Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 L GF D R + Y++W Y +N G RID+ ++S ++ A I Sbjct: 173 MTTLLASGFLDTFRYLYPNQEGAYTWWSYMNKVRERNIGWRIDYFIVSERIKDVIQEAAI 232 Query: 242 DTKPRGWTKPSDHTPVIVSLDIP 264 G SDH PV++ L++P Sbjct: 233 HPHVMG----SDHCPVMLELNVP 251 >gi|282855380|ref|ZP_06264703.1| exodeoxyribonuclease III [Pyramidobacter piscolens W5455] gi|282586760|gb|EFB92005.1| exodeoxyribonuclease III [Pyramidobacter piscolens W5455] Length = 307 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 92/261 (35%), Positives = 136/261 (52%), Gaps = 6/261 (2%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 V+ VAT+NVNS+R+R+ L W+ DI+ LQETK +D+ FP ++ L Y G Sbjct: 50 RVMRVATFNVNSLRSRLPILERWLPGAGVDILALQETKVQDQEFPLADMEQLGYRAAFRG 109 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +KSYNGVAILSK +P E++ V + + I + Y+P G IT Sbjct: 110 EKSYNGVAILSKREPDEVIHGFSD---GVSPLWDTRLIAARFGDIWILDTYVPQGKEITH 166 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 Y+ K +++R + +E L++ GD N+ P D NP ++ CF E+R Sbjct: 167 PDYEAKKEFLRRTAALIA--ARKDEKLLWTGDLNVAPTELDVTNPANKKDHVCFVKELRD 224 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYY-ADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 F +L D +R H LYSF+DY ++ + G RIDH++ +P + Sbjct: 225 LFAELCAPLVVDLLRVHHPGEELYSFFDYRIKNALERRIGWRIDHMLATPALAGQSRACW 284 Query: 241 IDTKPRGWTKPSDHTPVIVSL 261 IDT+PRGW KPSDHTP++ Sbjct: 285 IDTEPRGWEKPSDHTPMLADF 305 >gi|224532103|ref|ZP_03672735.1| exodeoxyribonuclease III [Borrelia valaisiana VS116] gi|224511568|gb|EEF81974.1| exodeoxyribonuclease III [Borrelia valaisiana VS116] Length = 255 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 59/260 (22%), Positives = 103/260 (39%), Gaps = 12/260 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCG 61 + + +WNVN IRA + ++KE PDI+C+QETK + P + + Y + Sbjct: 1 MKLISWNVNGIRAVLKKGFLEFVKEYAPDILCVQETKALREQLPKDLILENYYSYFSKSK 60 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 K Y+GV I SK +PI + + I + + Sbjct: 61 IKGYSGVCIYSKVEPIAVNFLGKEIFDNEGRGIIAYYDDF------VLINGYFPNSQALR 114 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + K+ ++ + + ++ GD+NI D +P + + +E Sbjct: 115 RRLVYKLDFLSYIENLIDSLVNGGKNVVICGDFNIAHTEIDLISPDSNRDSPGYYIEETT 174 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 N G+ D R + Y++W+Y + KN G RID+ +++ + + I Sbjct: 175 WIDNFLNKGYVDTFRIFNKEPGYYTWWNYRTGAREKNMGWRIDYFVVNEFFKRNVKKSLI 234 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 K G SDH PV + L Sbjct: 235 LDKVMG----SDHCPVFLEL 250 >gi|225552135|ref|ZP_03773075.1| exodeoxyribonuclease III [Borrelia sp. SV1] gi|225371133|gb|EEH00563.1| exodeoxyribonuclease III [Borrelia sp. SV1] Length = 255 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 59/260 (22%), Positives = 103/260 (39%), Gaps = 12/260 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCG 61 + + +WNVN IRA + ++KE PDI+C+QETK + P + + Y + Sbjct: 1 MKLISWNVNGIRAVLKKGFLEFVKEYTPDILCIQETKALREQLPKDLILENYYSYFSKSK 60 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 K Y+GV I SK +PI + + + I + + Sbjct: 61 IKGYSGVCIYSKVEPISVRLLGEEIFDNEGRGLVACYDDF------ILVNGYFPNSQVLR 114 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + K+ ++ A + + ++ GD+NI D +P + +E Sbjct: 115 RRLGYKLDFLSYVENLADSLVCDGKNVVICGDFNIAHTEIDLISPDSNRESPGYYIEETT 174 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 N G+ D R + Y++W Y + +N G RID+ +++ + + I Sbjct: 175 WLDDFLNKGYVDTFRIFNKDPGYYTWWSYRTRARERNMGWRIDYFIVNEFFKRNVEKSLI 234 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 K G SDH PV + L Sbjct: 235 LDKVMG----SDHCPVFLEL 250 >gi|189460159|ref|ZP_03008944.1| hypothetical protein BACCOP_00795 [Bacteroides coprocola DSM 17136] gi|189433149|gb|EDV02134.1| hypothetical protein BACCOP_00795 [Bacteroides coprocola DSM 17136] Length = 253 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 70/263 (26%), Positives = 117/263 (44%), Gaps = 13/263 (4%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ + +WNVN +RA E + D CLQETK ++ + + Sbjct: 2 IMKLISWNVNGLRACCDKGFREIFNELDADFFCLQETKMQEGQLDL-AFEGYTSYWNYAE 60 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G AI +++QP+ + L D+ D + R I N + + G Sbjct: 61 KKGYSGTAIFTRHQPLSVTYGLGIDEHDHEGRVITLEME-NFYLVTVYTPNSQDGLKRLD 119 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + + R +L+ ++P++ GD N+ + D NP +A FT + R+ Sbjct: 120 YR-----MTWEEDFRKYLLQLDRQKPVLVCGDLNVAHKEIDLKNPKTNRMNAGFTDQERE 174 Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 FQ L + GF D R + ++YS+W Y + KN G RID+ + S L A+ Sbjct: 175 KFQLLLDAGFIDTFRHFYPTQENIYSWWSYRFKAREKNAGWRIDYFLASSRIADKLQDAK 234 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263 I T+ G SDH PV V+++ Sbjct: 235 IHTEIFG----SDHCPVEVTINW 253 >gi|167767320|ref|ZP_02439373.1| hypothetical protein CLOSS21_01839 [Clostridium sp. SS2/1] gi|167711295|gb|EDS21874.1| hypothetical protein CLOSS21_01839 [Clostridium sp. SS2/1] gi|291559374|emb|CBL38174.1| exodeoxyribonuclease III [butyrate-producing bacterium SSC/2] Length = 250 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 65/261 (24%), Positives = 111/261 (42%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN IRA + + E + DI C+QE+K ++ L + + + Sbjct: 1 MKFISWNVNGIRACVKKGFLDFFNETDADIFCIQESKMQEGQLDLN-LPGYHQYWNYAVK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G I +K +PI + L ++ D + R I F ++ Sbjct: 60 KGYSGTGIFTKEEPISVFYGLGIEEHDQEGRVITLEFKDYYFITVYTPNSQSELARLSYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + ++LE ++P+IF GD N+ + D NP +A FT E R+ Sbjct: 120 M------KWEEDFLAYLKKLEEKKPVIFCGDLNVAVEEIDLKNPKTNRKNAGFTDEEREK 173 Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 + + + GF D R + +YS+W Y ++ N G RID+ ++S + A+I Sbjct: 174 MRTILSNGFIDTFRYLYPDQTGIYSWWSYRFNARKNNAGWRIDYFIVSECLKDRISDAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 T G SDH P+ + Sbjct: 234 LTDVMG----SDHCPIELDFK 250 >gi|304384068|ref|ZP_07366522.1| exodeoxyribonuclease III [Prevotella marshii DSM 16973] gi|304334784|gb|EFM01060.1| exodeoxyribonuclease III [Prevotella marshii DSM 16973] Length = 250 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 66/261 (25%), Positives = 111/261 (42%), Gaps = 12/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + + + + D CLQETK ++ + + + + Sbjct: 1 MKFVSWNVNGLRACVGKSFEESFRMLDADFFCLQETKMQEGQLNLQ-FEGYEAYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +++QP + + + D + R I + Sbjct: 60 KGYSGTAIYTRHQPQSVSYGMGVEAHDHEGRIITLEMPGFYLVTVYTPNSQDGLKRLAYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + ++L+ ++P+I GD N+ + D NP ++A FT E R Sbjct: 120 MQ------WEEDFLQYIKKLDAKKPVIICGDMNVAHEEIDIKNPKTNRHNAGFTDEERNK 173 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F L + GFTD R + YS+W Y + +KN G RID+ ++S + A+I Sbjct: 174 FTTLLSEGFTDTFRYKYPEQVRYSWWSYRFQARAKNAGWRIDYFVVSNRLKPQIIDAKIH 233 Query: 243 TKPRGWTKPSDHTPVIVSLDI 263 T G SDH PV V L++ Sbjct: 234 TAILG----SDHCPVEVELNL 250 >gi|15594879|ref|NP_212668.1| exodeoxyribonuclease III (exoA) [Borrelia burgdorferi B31] gi|195941668|ref|ZP_03087050.1| exodeoxyribonuclease III (exoA) [Borrelia burgdorferi 80a] gi|216264267|ref|ZP_03436259.1| exodeoxyribonuclease III [Borrelia burgdorferi 156a] gi|223888847|ref|ZP_03623438.1| exodeoxyribonuclease III [Borrelia burgdorferi 64b] gi|224532684|ref|ZP_03673301.1| exodeoxyribonuclease III [Borrelia burgdorferi WI91-23] gi|225548581|ref|ZP_03769628.1| exodeoxyribonuclease III [Borrelia burgdorferi 94a] gi|226321012|ref|ZP_03796557.1| exodeoxyribonuclease III [Borrelia burgdorferi 29805] gi|226321840|ref|ZP_03797366.1| exodeoxyribonuclease III [Borrelia burgdorferi Bol26] gi|2688454|gb|AAC66902.1| exodeoxyribonuclease III (exoA) [Borrelia burgdorferi B31] gi|215980740|gb|EEC21547.1| exodeoxyribonuclease III [Borrelia burgdorferi 156a] gi|223885663|gb|EEF56762.1| exodeoxyribonuclease III [Borrelia burgdorferi 64b] gi|224512302|gb|EEF82686.1| exodeoxyribonuclease III [Borrelia burgdorferi WI91-23] gi|225370611|gb|EEH00047.1| exodeoxyribonuclease III [Borrelia burgdorferi 94a] gi|226233029|gb|EEH31782.1| exodeoxyribonuclease III [Borrelia burgdorferi Bol26] gi|226233613|gb|EEH32349.1| exodeoxyribonuclease III [Borrelia burgdorferi 29805] Length = 255 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 59/260 (22%), Positives = 104/260 (40%), Gaps = 12/260 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCG 61 + + +WNVN IRA + ++KE PDI+C+QETK + P + + Y + Sbjct: 1 MKLISWNVNGIRAVLKKGFLEFVKEYTPDILCIQETKALREQLPKDLILENYYSYFSNSK 60 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 K Y+GV I SK +PI + + + I + + Sbjct: 61 IKGYSGVCIYSKVEPISVRLLGEEIFDNEGRGLVACYDDF------ILVNGYFPNSQVLR 114 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + K+ ++ A + + ++ GD+NI D +P + + +E Sbjct: 115 RRLGYKLDFLSYVENLADSLVCDGKNVVICGDFNIAHTEIDLISPDSNRDSPGYYIEETT 174 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 N G+ D R + Y++W Y + +N G RID+ +++ + + I Sbjct: 175 WLDDFLNKGYVDTFRIFNKDPGYYTWWSYRTRARERNMGWRIDYFIVNEFFKRNVEKSLI 234 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 K G SDH PV + L Sbjct: 235 LDKVMG----SDHCPVFLEL 250 >gi|145589433|ref|YP_001156030.1| exodeoxyribonuclease III Xth [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145047839|gb|ABP34466.1| Exodeoxyribonuclease III [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 282 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 83/275 (30%), Positives = 135/275 (49%), Gaps = 17/275 (6%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENN-----PDIICLQETKTEDKNFPFETLQSLNYHIE 58 + +A WNVNS++ R+ ++ W+K+ D +CLQE K D +P + L+ Y Sbjct: 5 IRIAAWNVNSLKVRLPHVIRWLKDQEQANQPIDALCLQELKLTDDKYPHQELEDEGYVSL 64 Query: 59 TCGQKSYNGVAILSKY------------QPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 GQK+YNGVAI+ + ++ ++PG + + Q Q + Sbjct: 65 AAGQKTYNGVAIIVRKAALAPIASDESTTFLKQARNIPGFEDEQQRILAATIPFAGMQPI 124 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 R+ + Y P+G S K+ K++W++ + Q L+ L GD+NI P D ++P Sbjct: 125 RLISAYFPNGQSPDSDKFAYKLNWMQSLEDWLVQELQSNTRLALLGDFNIAPADADVHDP 184 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226 WE + R +F+ L +G D+ R T YS+WDY + +N G+RIDHI Sbjct: 185 KAWEGQNLVSPPERAAFESLIKLGLCDSFRIFEQTPKTYSWWDYRMMGFRRNAGMRIDHI 244 Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +LS ++ +D PR W +PSDH PV+ + Sbjct: 245 LLSDPLKEKCSASFVDKLPRSWEQPSDHAPVVAEI 279 >gi|257867352|ref|ZP_05647005.1| exodeoxyribonuclease [Enterococcus casseliflavus EC30] gi|257873685|ref|ZP_05653338.1| exodeoxyribonuclease [Enterococcus casseliflavus EC10] gi|257801408|gb|EEV30338.1| exodeoxyribonuclease [Enterococcus casseliflavus EC30] gi|257807849|gb|EEV36671.1| exodeoxyribonuclease [Enterococcus casseliflavus EC10] Length = 252 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 71/263 (26%), Positives = 117/263 (44%), Gaps = 13/263 (4%) Query: 4 VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA N + + + D CLQETK ++ + L + + + Sbjct: 1 MKFISWNVNGLRAIVKKNFSEVFEALDADFFCLQETKLQEGQIELD-LPGYHQYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K + + L ++ D + R I + + Sbjct: 60 KGYSGTAIFAKEPALSVRYGLGIEEHDTEGRVITLEYPEF-----FLITCYTPNSQNELR 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + D +++W FL + L+ ++P+I GD N+ + D N + A FT E R+ Sbjct: 115 RLDYRMTWEDAFLAY-LTELKQQKPVILCGDLNVAHKNIDIKNWKTNQKSAGFTPEEREK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F L GFTD R + +YS+W Y ++ N G RID+ ++S + L A+I Sbjct: 174 FSTLLAAGFTDTFRYFYPDAEGIYSWWSYRFNARKNNAGWRIDYFVVSDDLNESLLDAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLDIP 264 T G SDH PV + L+ P Sbjct: 234 HTDIIG----SDHCPVELDLNYP 252 >gi|146337348|ref|YP_001202396.1| putative exodeoxyribonuclease III (xthA) [Bradyrhizobium sp. ORS278] gi|146190154|emb|CAL74146.1| putative exodeoxyribonuclease III (xthA) [Bradyrhizobium sp. ORS278] Length = 271 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 76/271 (28%), Positives = 121/271 (44%), Gaps = 11/271 (4%) Query: 4 VTVA--TWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETC 60 + + TWN+NS+R RI +A +IK+ PD++CLQETK D FP + + L Y H+ Sbjct: 1 MRLVLTTWNINSVRLRIDLVAKFIKQVRPDVLCLQETKCIDDAFPLKRFKRLGYEHVALN 60 Query: 61 GQKSYNGVAILSKYQPIEIV-THLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 GQK Y+GVA++SK+ Q L + N Y+P G I Sbjct: 61 GQKGYHGVAVISKWPFESTHVRTFCDKVDSRHITVAFGEKAQLAQPLVLHNFYVPAGGDI 120 Query: 120 T----STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + K++ K+ ++ ++ I GD N+ P HD ++ Sbjct: 121 PDPALNPKFEHKLQFLDEMKACEPLHPRGDDRHILVGDLNVAPHEHDVWSHKQLLKVVSH 180 Query: 176 TLEVRQSFQKLQNMGFTDAI--RATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEA 232 T + Q+ G + + +Y++W Y A W+ ++G R+DHI +S Sbjct: 181 TPIETEKLLAAQSHGEWVDVARERIPMSEKVYTWWSYRAADWTVGDRGRRLDHIWVSRAL 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + I R W +PSDH PV V+LD+ Sbjct: 241 KDRVSDFDILRDARSWERPSDHVPVTVTLDV 271 >gi|227874120|ref|ZP_03992326.1| exodeoxyribonuclease III [Oribacterium sinus F0268] gi|227840032|gb|EEJ50456.1| exodeoxyribonuclease III [Oribacterium sinus F0268] Length = 254 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 67/265 (25%), Positives = 116/265 (43%), Gaps = 13/265 (4%) Query: 1 MSVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 M + + +WNVN +RA + N K + D+ CLQETK ++ + L + Sbjct: 1 MFMKKLISWNVNGLRAVMGKNFMEDFKRLDADMFCLQETKLQEGQIDLD-LPGYFQYWNY 59 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G AI +K +P+ + + ++ D + R I + + Sbjct: 60 AVKKGYSGTAIFTKEEPLSVQYGIGVEEHDQEGRVITLEYPEFYLITVYVPNSQGELKRL 119 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + LE ++P+I+ GD N+ + D NP +A F+ E Sbjct: 120 PYRM------KFEDAFLNYILTLEKKKPVIYCGDLNVAHEEIDLKNPDSNHMNAGFSDEE 173 Query: 180 RQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R F ++ + G+ D+ R + YS+W Y + +N G RID+ ++S + L S Sbjct: 174 RAKFSRVLDSGYLDSFRHFYPNKEEEYSWWSYRTKARDRNVGWRIDYFVVSKQLEKKLLS 233 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263 A I + G SDH PV ++LD+ Sbjct: 234 ASIHQEVMG----SDHCPVEITLDL 254 >gi|256380462|ref|YP_003104122.1| exodeoxyribonuclease III Xth [Actinosynnema mirum DSM 43827] gi|255924765|gb|ACU40276.1| exodeoxyribonuclease III Xth [Actinosynnema mirum DSM 43827] Length = 264 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 61/267 (22%), Positives = 110/267 (41%), Gaps = 13/267 (4%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++TV+T NVN +RA W+ D++CLQE + E E +H Sbjct: 1 MLTVSTVNVNGLRAAAKKGYLEWLAATGADVVCLQEVRAEPGQLADEVRDPEGWHSAHAH 60 Query: 62 --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 K +GVA+L++ QP + ++ + R++E T + + Sbjct: 61 SAVKGRSGVAVLTREQPTAVRVGFGVEEFEHSGRYVEVELTG-----LVVGSLYLPSGEV 115 Query: 120 TSTKYDDKISWIKRFLRF----ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + + D+K ++ FL + + ++ GD+NI + D + + A F Sbjct: 116 GTERQDEKDRFMAAFLPYLVELREKAAADGREVLVCGDWNIAHRQADLKSWKTNQKSAGF 175 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 R+ + G+TD +RA H YS+W Y ++ + G RID+ + S + Sbjct: 176 LPYEREWLGSVFESGYTDVVRALHPDVEGPYSWWSYRGKAFDNDSGWRIDYQVASEGLAA 235 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261 +A ++ + SDH PV V Sbjct: 236 RAETAVVERAATYAERWSDHAPVTVEY 262 >gi|29830170|ref|NP_824804.1| exodeoxyribonuclease [Streptomyces avermitilis MA-4680] gi|29607280|dbj|BAC71339.1| putative exodeoxyribonuclease [Streptomyces avermitilis MA-4680] Length = 287 Score = 184 bits (467), Expect = 1e-44, Method: Composition-based stats. Identities = 58/268 (21%), Positives = 100/268 (37%), Gaps = 8/268 (2%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 V+TV + NVN +RA W+ E + D++CLQE + E P +H+ Sbjct: 21 VLTVTSVNVNGLRAAAKKGFVEWLAETSADVLCLQEVRAEPDQLPAGVRAPDGWHVVHAP 80 Query: 62 Q--KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 K GV++ ++ +P + + D R++EA T + G Sbjct: 81 AAAKGRAGVSLYTRREPDRVRVGFGSAEFDGGGRYVEADLPGVTVA-SLYLPSGEVGTER 139 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 KY ++ + ++ GD+NI Q D N +A F E Sbjct: 140 QDEKYRFMGEFLTHLKDLRERAAADGREVLVCGDWNIAHQEADLKNWRGNRKNAGFLPEE 199 Query: 180 RQSFQKL----QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 R+ ++ D YS+W Y ++ + G RID+ + +P + Sbjct: 200 REWLGRVLSPEDGGYVDVMRALHPDVEGPYSWWSYRGRAFDNDSGWRIDYEVATPGLAAK 259 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 ++ + SDH PV V D+ Sbjct: 260 AVKGFVERAATHEERWSDHAPVTVVYDL 287 >gi|212550466|ref|YP_002308783.1| exodeoxyribonuclease III [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|212548704|dbj|BAG83372.1| exodeoxyribonuclease III [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 253 Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 76/262 (29%), Positives = 121/262 (46%), Gaps = 13/262 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH---IET 59 + + ++NVN IR+ I L W+ + +PDI C+QE K + + + QSL Y+ + + Sbjct: 1 MKIISFNVNGIRSAINKGLIEWLDKESPDIFCVQEIKAQREQIDILSFQSLGYNYQLVHS 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GVAI SK P + D + R I A F L I +Y+P G Sbjct: 61 ARRKGYSGVAIFSKTCPNTYSFGMNKYSFDNEGRVIRADF----NNLTIICVYVPSG-TT 115 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K+ ++ F + L+ GDYNI Q D P + F E Sbjct: 116 GKVRQAIKMEFLDTFTTYLLNLQRERPYLLVCGDYNICRQDRDINYPERHMGVSGFLPEE 175 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R F GF D+ R + + YS+W Y +++ +KN G RID+ +++ S L SA Sbjct: 176 RAWFDYFIRCGFVDSFREFNQDKNQYSWWSYRSNARAKNLGWRIDYHIITRNLQSQLKSA 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261 + + + SDH P++V Sbjct: 236 SLLQEI----EISDHCPIVVEF 253 >gi|315605812|ref|ZP_07880844.1| exodeoxyribonuclease III [Actinomyces sp. oral taxon 180 str. F0310] gi|315312510|gb|EFU60595.1| exodeoxyribonuclease III [Actinomyces sp. oral taxon 180 str. F0310] Length = 271 Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 73/272 (26%), Positives = 119/272 (43%), Gaps = 18/272 (6%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ATWNVNSIR RI + A+++ ++ DI+ +QE K FP + Y + G Sbjct: 1 MRFATWNVNSIRTRIDRVIAFLERSDTDILAMQEIKCRPDQFPTAPFEEAGYQVAVHGLN 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL--------------RIG 109 +NGVA+ S+ ++ H P + +EA T + I Sbjct: 61 QWNGVAVASRLAITDVRDHFPHQPSFGEPATVEARALGVTVDVTGVLEAREGSPSSLTIW 120 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEP-LIFAGDYNIIPQPHDCYNPII 168 +LY+P+G + + Y K+ W+ L + + GD+N+ P D ++ + Sbjct: 121 SLYVPNGRELDNPHYAYKLDWLATLAEQGRTWLSDSQALIALVGDWNVAPHDEDVWDMSV 180 Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 +E + R +F + G+ + R D Y++WDY + KN+G+RID Sbjct: 181 FEGSTHVSRAERDAFAAFERDGWVEVTR---DRVTNYTYWDYQKLRFPKNQGMRIDFAYC 237 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 S + + A ID R SDH PVIV Sbjct: 238 SAPLAARVTGAHIDRDERKGKGASDHVPVIVD 269 >gi|308070428|ref|YP_003872033.1| Exodeoxyribonuclease [Paenibacillus polymyxa E681] gi|305859707|gb|ADM71495.1| Exodeoxyribonuclease [Paenibacillus polymyxa E681] Length = 254 Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 72/260 (27%), Positives = 115/260 (44%), Gaps = 13/260 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + ++KE N DI C+QETK ++ E ++ + + Sbjct: 1 MKLISWNVNGLRACVTKGFYTYLKETNADIFCVQETKLQEGQILMENMEEYTQYWNYAEK 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +P+ + L ++ + N + Sbjct: 61 KGYSGTAIFTKIKPLSVHYGLEENEEPEGRTITLEFENFYLVNVYTPNT------KRDLS 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + ++ W RF + Q+L+ +P+I GD N+ Q D N +A FT E R+ Sbjct: 115 RLPYRLEWEDRFRSY-LQQLDALKPVIVCGDLNVAHQEIDLKNAKANYGNAGFTPEERER 173 Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 L + GF D R + +YS+W Y +N G RID+ ++S LL A I Sbjct: 174 MSLLLDAGFIDTFRTFYPDRTDVYSWWSYMPKVRERNIGWRIDYFLVSERLRPLLMDASI 233 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 D G SDH PVI+ L Sbjct: 234 DCHITG----SDHCPVILDL 249 >gi|229544130|ref|ZP_04433189.1| exodeoxyribonuclease III [Bacillus coagulans 36D1] gi|229325269|gb|EEN90945.1| exodeoxyribonuclease III [Bacillus coagulans 36D1] Length = 251 Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 64/259 (24%), Positives = 109/259 (42%), Gaps = 13/259 (5%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + A+ E + DI C+QETK + + L + + Sbjct: 1 MKFVSWNVNGLRACVKKGFLAFFAETDADIFCVQETKLQAGQIALD-LDGYYQYWNYAER 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G A+ +K +P+ + + D + + R + + + N+Y P+ + Sbjct: 60 KGYSGTAVFTKKEPLSVRYGVGEDRTEPEGRILTLEYE----DFYLVNVYTPNSQRDLAR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 +R L+ ++P+I GD N+ Q D N ++ FT E R Sbjct: 116 LGYRLEWE--DRMRAYLTELDKKKPVIVCGDMNVAHQEIDLKNAKNNVGNSGFTAEERGK 173 Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 L N GF D+ R + Y++W Y +N G RID+ ++S L A + Sbjct: 174 MTGLLNSGFIDSFRYFYPEREGAYTWWSYMNKVRERNIGWRIDYFLVSKRLAGRLKDAGM 233 Query: 242 DTKPRGWTKPSDHTPVIVS 260 + G SDH PV + Sbjct: 234 YPEIMG----SDHCPVFLE 248 >gi|225569150|ref|ZP_03778175.1| hypothetical protein CLOHYLEM_05230 [Clostridium hylemonae DSM 15053] gi|225161949|gb|EEG74568.1| hypothetical protein CLOHYLEM_05230 [Clostridium hylemonae DSM 15053] Length = 250 Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 72/260 (27%), Positives = 114/260 (43%), Gaps = 13/260 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN IRA + + +E + DI C+QETK ++ ET + + Sbjct: 1 MKCISWNVNGIRACVQKGFMDFFQEADADIFCIQETKMQEGQLELET-PGYFQYWNYAER 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G A+ +K +P+ + ++ D + R I F ++ Sbjct: 60 KGYSGTAVFTKKEPLSFTCGIGIEEHDKEGRVITLEFEEFYFVTVYTPNSQSELARLSYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + ++LE ++P+IF GD N+ + D NP +A FT E R+ Sbjct: 120 M------EWEDAFLAYLKKLEEKKPVIFCGDLNVAAEEIDLKNPKTNRKNAGFTDEEREK 173 Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F+K++ GF D R + +YS+W Y + KN G RID+ +S L ARI Sbjct: 174 FRKIKASGFVDTFRYFYPDEEGIYSWWSYRFRAREKNAGWRIDYFCVSQSLKERLEDARI 233 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 T G SDH PV + L Sbjct: 234 HTDVMG----SDHCPVELDL 249 >gi|90421064|ref|ZP_01228967.1| exodeoxyribonuclease III [Aurantimonas manganoxydans SI85-9A1] gi|90334699|gb|EAS48476.1| exodeoxyribonuclease III [Aurantimonas manganoxydans SI85-9A1] Length = 268 Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 81/266 (30%), Positives = 124/266 (46%), Gaps = 9/266 (3%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQK 63 T+ATWN+NS+R R+ + ++E PDI+CLQETK + FP + ++L Y HI GQK Sbjct: 4 TIATWNINSVRLRMPLVQRLLEERKPDILCLQETKCPNDQFPEKAFKALGYEHIAIHGQK 63 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 Y+GVA +SK +IV AR + +I + LR+ N Y+P G + + Sbjct: 64 GYHGVATVSKQPFDDIVRQDFCQIG--DARHLSTRLSIGGRRLRVHNFYVPAGGDEPNPE 121 Query: 124 YDDKISWIKRFLRFAS---QRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K F+ E + GD NI P D ++ T Sbjct: 122 VNVKFKHKLDFIEEMRLISAEAEPGVSSLLVGDLNIAPFETDVWSHKQLLKVVSHTPIEC 181 Query: 181 QSFQKLQNMGFTDAIRATH--DTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLLH 237 + + Q G + H L+++W Y + W + N+G R+DHI S + L Sbjct: 182 EGLLRAQADGRWTDLMRHHVPMDEQLFTWWSYRSKDWAASNRGRRLDHIWGSQDLAPALT 241 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263 + + + R W +PSDH PV+ S DI Sbjct: 242 AIDVMSAARSWERPSDHVPVLASFDI 267 >gi|149918584|ref|ZP_01907073.1| exodeoxyribonuclease III [Plesiocystis pacifica SIR-1] gi|149820660|gb|EDM80072.1| exodeoxyribonuclease III [Plesiocystis pacifica SIR-1] Length = 262 Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 83/257 (32%), Positives = 124/257 (48%), Gaps = 5/257 (1%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSY 65 + TWNVNS+RAR+ N+ ++ E+ PD+ CLQETK E+ FP L Y + G K Y Sbjct: 7 LMTWNVNSVRARLDNVLTYLDEHEPDVACLQETKVENALFPRVPFMELGYQVALNGTKGY 66 Query: 66 NGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124 GVA L K +P+++ D R + T+ +RI NLY P+G + S + Sbjct: 67 AGVATLVKGQKPVDVQLGFAEGPEDKHKRILALTYEG----VRIYNLYAPNGTALGSEAF 122 Query: 125 DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ 184 K+ W R R + ++ GD+NI D ++ + FT E + Sbjct: 123 AYKLDWFARLRGELDARFGPSDEVVLCGDFNIARDARDTWSVESMKGGTHFTPEEHAALD 182 Query: 185 KLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK 244 L+N G D R D ++++DY SW K G+RID++ + AT D + Sbjct: 183 ALENFGLHDCFRKFDDAPGRFTWFDYRGGSWEKKHGLRIDYVYATAPATERCTEVVHDWE 242 Query: 245 PRGWTKPSDHTPVIVSL 261 PR W +PSDH PV+ Sbjct: 243 PRAWDEPSDHVPVVARF 259 >gi|293400493|ref|ZP_06644638.1| exodeoxyribonuclease III [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291305519|gb|EFE46763.1| exodeoxyribonuclease III [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 253 Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 71/261 (27%), Positives = 111/261 (42%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN IRA + + +E + DI C+QETK + T Y I + + Sbjct: 3 MKMVSWNVNGIRACMTKGFMDFFQEIDADIFCIQETKMQPGQLDIATPGYYQY-INSADK 61 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G + +K +PI + L D+ D + R I + + Sbjct: 62 KGYSGTMVFTKEKPIAVTYDLGIDEHDHEGRVITCEYENFYLVCVYTPNSKDGLLRLDYR 121 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + R L+ ++ +I GD N+ + D NP +A FT E R Sbjct: 122 MQ------WEDDFRAYLNALKEKKSVIVCGDLNVAHKEIDLKNPKTNRRNAGFTDEERAK 175 Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 LQ GF D+ R + +YS+W Y + KN G RID+ ++S +A + A I Sbjct: 176 MTTLQQSGFIDSFRYLYPEQEGIYSWWSYRFKAREKNAGWRIDYFLVSEDAKDKIQEASI 235 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 T G SDH PV + +D Sbjct: 236 HTDVFG----SDHCPVSLDID 252 >gi|302345223|ref|YP_003813576.1| exodeoxyribonuclease III [Prevotella melaninogenica ATCC 25845] gi|302150206|gb|ADK96468.1| exodeoxyribonuclease III [Prevotella melaninogenica ATCC 25845] Length = 249 Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 68/260 (26%), Positives = 111/260 (42%), Gaps = 12/260 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + K+ + D CLQETK + + + Sbjct: 1 MKFISWNVNGLRACVGKEFEQQFKDLDADFFCLQETKMQAGQLDLS-FPGYESYWNYADK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K++P+ + + D+ D + R I + + + G Sbjct: 60 KGYSGTAIYTKHKPLSVTYGIDIDEHDHEGRVITLEME-DFYLVTVYTPNSQDGLRRL-- 116 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + + +L+ ++P+I GD N+ Q D NP +A FT E R+ Sbjct: 117 ---EYRMKWEDDFQAYLHKLDEKKPVIVCGDMNVAHQEIDLKNPKTNHKNAGFTDEEREK 173 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 +L + GF D R + YS+W Y + KN G RID+ ++S L A+I Sbjct: 174 MTQLLSNGFIDTFRTLYPEQVTYSWWSYRFRAREKNTGWRIDYFLISERLKDRLEDAKIH 233 Query: 243 TKPRGWTKPSDHTPVIVSLD 262 T+ G SDH PV + L Sbjct: 234 TEIMG----SDHCPVEIILK 249 >gi|311032922|ref|ZP_07711012.1| exodeoxyribonuclease III [Bacillus sp. m3-13] Length = 254 Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 60/261 (22%), Positives = 105/261 (40%), Gaps = 10/261 (3%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN IRA + + + + DI C+QETK ++ +T Y + Sbjct: 1 MKLVSWNVNGIRACVKKGFMDYFNDMDADIFCIQETKLQEGQIDLDTPGYYQY-WNYAIK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G A+ +K +P+++ L + + + Sbjct: 60 KGYSGTAVFTKMKPLQVRYGLDEKKAEECEPEGRILTLEYEDFFLVNVYTPNSQRDLARL 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + + L+ ++ +I GD N+ D NP N++ FT E R Sbjct: 120 PFR---LDWEDRFLAYIKMLDQQKSVIVCGDLNVAHAEIDLKNPKSNRNNSGFTEEERGK 176 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +L GF+D R + Y++W Y +N G RID+ ++S L A I Sbjct: 177 MTRLLGEGFSDTFRHFYPELTDKYTWWSYMNKVRERNIGWRIDYFIVSDNLKGSLKDAEI 236 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 + G SDH PV++ L+ Sbjct: 237 HSDIMG----SDHCPVVLILN 253 >gi|257897862|ref|ZP_05677515.1| AP endonuclease [Enterococcus faecium Com15] gi|257835774|gb|EEV60848.1| AP endonuclease [Enterococcus faecium Com15] Length = 250 Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 70/261 (26%), Positives = 113/261 (43%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + N + E + D CLQETK + + L + + Sbjct: 1 MKFISWNVNGLRAIVNKNFLEFFHELDADFFCLQETKLQAGQIDLD-LPGYYQYWNYAER 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K + + D D + R I ++ + Sbjct: 60 KGYSGTAIFAKEPALNATYGMGIDIHDTEGRLITLEYSDF-----FLVTCYTPNSQSELK 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + D ++ W + F + L+ ++P+I GD N+ Q D N + +A FT E R + Sbjct: 115 RLDYRLEWEEAFYNYLEN-LKKQKPVIVCGDLNVAHQTIDLKNWKTNQKNAGFTPEERAA 173 Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +L + GF D R + +YS+W+Y +S N G RID+ + S + L A+I Sbjct: 174 LSRLLDNGFIDTFRYFYPTQEGVYSWWNYRFNSRKNNAGWRIDYFLTSKDLAPRLADAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 T G SDH PV + L Sbjct: 234 HTDIMG----SDHCPVELDLK 250 >gi|118602958|ref|YP_904173.1| exodeoxyribonuclease III [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567897|gb|ABL02702.1| exodeoxyribonuclease III [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 256 Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats. Identities = 60/261 (22%), Positives = 102/261 (39%), Gaps = 9/261 (3%) Query: 5 TVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + T NVN IRA WIK N D+ICLQETK ++ E YH K Sbjct: 3 RIITANVNGIRAAEQKGFFDWIKIQNADVICLQETKAQENQLD-ERFYPKEYHCYYQSAK 61 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 + ++ + F + + L + ++Y+ G+ + Sbjct: 62 KKG--YSGTAIFTKQVPIQVIKKSPWENINFEGRFIRADFEDLSVISIYIHSGSVKQKRQ 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVRQS 182 +RF+ + + +I GD NI+ Q D N + ++ E Sbjct: 120 DLKMAFLTERFMPYLQEIKISGRKVIICGDMNIVHQERDIKNWKANQKNSGCLPKERAWL 179 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 + +GF D+ R + Y++W +W+ N G RID+ +L+P + S I Sbjct: 180 DELFFEVGFIDSFREVNQEERQYTWWSNRGQAWANNVGWRIDYQILTPNLKDTIKSVSIY 239 Query: 243 TKPRGWTKPSDHTPVIVSLDI 263 R SDH P+I++ ++ Sbjct: 240 KDER----FSDHAPLIINYNL 256 >gi|134045625|ref|YP_001097111.1| exodeoxyribonuclease III Xth [Methanococcus maripaludis C5] gi|132663250|gb|ABO34896.1| exodeoxyribonuclease III Xth [Methanococcus maripaludis C5] Length = 249 Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 69/260 (26%), Positives = 117/260 (45%), Gaps = 12/260 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN IRA + ++K +PD++C+QETK + L + + Sbjct: 1 MKMLSWNVNGIRACLKNGFMDFLKRESPDVMCIQETKVQSGQVQL-GLDGYFQYWNYAER 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G A+ +K +P E++ + + + + R I F + + G Sbjct: 60 KGYSGTAVFTKIKPNEVIYGIKNSEHNGEGRVITLKFDEY-YLVNVYTPNSQRGLTRLKY 118 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + + LE ++P+IF GD N+ + D NP +A FT E R+ Sbjct: 119 RQ-----KWDQDFLNYVKTLENKKPVIFCGDLNVAHKEIDLKNPKTNVKNAGFTPEERKG 173 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F + N GF D R + YS+W Y ++ ++N G RID+ +S + L A I Sbjct: 174 FDNIVNSGFLDTFREFNKEPDNYSWWSYRFNARARNIGWRIDYFCISESLRNNLKDAFIM 233 Query: 243 TKPRGWTKPSDHTPVIVSLD 262 ++ G SDH PV + D Sbjct: 234 SEIMG----SDHCPVGIIFD 249 >gi|15966954|ref|NP_387307.1| putative exodeoxyribonuclease III protein [Sinorhizobium meliloti 1021] gi|307301727|ref|ZP_07581486.1| exodeoxyribonuclease III [Sinorhizobium meliloti BL225C] gi|307316249|ref|ZP_07595693.1| exodeoxyribonuclease III [Sinorhizobium meliloti AK83] gi|15076227|emb|CAC47780.1| Putative exodeoxyribonuclease III [Sinorhizobium meliloti 1021] gi|306898089|gb|EFN28831.1| exodeoxyribonuclease III [Sinorhizobium meliloti AK83] gi|306903425|gb|EFN34014.1| exodeoxyribonuclease III [Sinorhizobium meliloti BL225C] Length = 268 Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 71/266 (26%), Positives = 110/266 (41%), Gaps = 6/266 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 +++ATWN+NS+R R+ + ++K PDI+CLQE K + FP L+ L Y + Sbjct: 3 LSIATWNINSVRLRMPLVEHFLKTWQPDILCLQEIKCRNDQFPSAPLRKLGYEYIEMHGQ 62 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 P+ ++ AR + F +T+R+ N Y+P G Sbjct: 63 KGYHGVATISRLPLHELSDRRDYCGVGDARHLSVVFAAGGKTIRLHNFYVPAGGDEPDRT 122 Query: 124 YDDKISWIKRFLRFASQRL---ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K F+ E I GD NI P HD ++ T Sbjct: 123 VNPKFGHKLDFVDEMKLLHAEAEAGVSSILVGDLNIAPLEHDVWSHKQLLKIVSHTPVET 182 Query: 181 QSFQKLQNMGFTDAIRATH--DTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLLH 237 + + G + H LY++W Y A W + ++G R+DHI S + S L Sbjct: 183 EGLVSVMTGGAWVDLMRRHAPPPEKLYTWWSYRAKDWTAADRGRRLDHIWSSADLASQLV 242 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263 I + RGW +PSDH PVI ++ Sbjct: 243 RVEILKEARGWERPSDHVPVIAHFEL 268 >gi|282877708|ref|ZP_06286523.1| exodeoxyribonuclease III [Prevotella buccalis ATCC 35310] gi|281300280|gb|EFA92634.1| exodeoxyribonuclease III [Prevotella buccalis ATCC 35310] Length = 249 Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 69/259 (26%), Positives = 105/259 (40%), Gaps = 12/259 (4%) Query: 4 VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + A + D CLQETK + + + + + Sbjct: 1 MKFISWNVNGLRACVKKDFEASFHHLDADFFCLQETKMQAGQLDLQ-FEGYQSYWNYADK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K+ P+ + L D+ D + R I + Sbjct: 60 KGYSGTAIYTKHTPLNVTYGLGIDEHDHEGRVITMEMDDFFLITVYVPNSQDELRRLDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + R +L+ +P+I GD N+ + D NP +A FT E R+ Sbjct: 120 MQ------WEDDFRAYVMQLDAIKPVIICGDLNVAHEEIDLKNPKTNRRNAGFTDEEREK 173 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 L N GF D R + YS+W Y + KN G RID+ ++S L A+I Sbjct: 174 MTILLNNGFVDTFRHLYPEQVTYSWWSYRFRAREKNAGWRIDYFLISERLKERLVDAKIH 233 Query: 243 TKPRGWTKPSDHTPVIVSL 261 T+ G SDH PV + L Sbjct: 234 TEILG----SDHCPVELEL 248 >gi|223039251|ref|ZP_03609541.1| exodeoxyribonuclease III [Campylobacter rectus RM3267] gi|222879612|gb|EEF14703.1| exodeoxyribonuclease III [Campylobacter rectus RM3267] Length = 256 Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 69/263 (26%), Positives = 117/263 (44%), Gaps = 12/263 (4%) Query: 4 VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + AW++E PD + LQE K + + P E + L ++ + Sbjct: 1 MKLISWNVNGLRAVAAKDGFAWLEEQKPDFLGLQEIKVRESDVPSEIYK-LGFNEISVNS 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 + G + + VT D + R +E F + + N+Y P+G Sbjct: 60 ATRAGYSGVMSLAKFASVTQKAAFFDDDEGRVLEHRFG----NVALFNIYFPNGQ-KDEA 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + K+ + +FL +A + ++ + +IF GD N + D NP + F R Sbjct: 115 RLAYKMDFYAKFLAYAQELVKQGKDVIFCGDVNTAHREIDLKNPKANAKTSGFLPIERAW 174 Query: 183 FQKLQNMGFTDAIRA-THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 ++ + GF D R D YS+W Y ++ +KN G RID+ +S L A I Sbjct: 175 LDEVVSHGFIDTFRHVRGDAVDAYSWWSYRFNARAKNVGWRIDYFFISASLKDRLKDAFI 234 Query: 242 DTKPRGWTKPSDHTPVIVSLDIP 264 + G SDH PV + +D+ Sbjct: 235 LSDITG----SDHCPVGIEIDLD 253 >gi|158321340|ref|YP_001513847.1| exodeoxyribonuclease III Xth [Alkaliphilus oremlandii OhILAs] gi|158141539|gb|ABW19851.1| exodeoxyribonuclease III Xth [Alkaliphilus oremlandii OhILAs] Length = 252 Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 67/261 (25%), Positives = 109/261 (41%), Gaps = 13/261 (4%) Query: 5 TVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +WNVN IRA + + KE + DI C+QE+K + E L+ + + +K Sbjct: 3 KLISWNVNGIRACVTKGFLDYFKEVDADIFCIQESKLQAGQIDLE-LEGYHQYWNYAEKK 61 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 Y+G AI +K +PI + + ++ D + R I F + Sbjct: 62 GYSGTAIFTKEEPISVFYGIGIEEHDKEGRVITLEFGDYYMVTVYTPNSQQKLARLDYRM 121 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + R L+ ++P+I GD N+ D NP +A F+ E R F Sbjct: 122 ------TWEDCFRSYLNNLDKQKPIIVCGDLNVAHNEIDLKNPKSNRKNAGFSDEERAKF 175 Query: 184 QKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 + G+ D R + Y++W Y ++ + N G RID+ +S L SA I Sbjct: 176 TEFLGNGYIDTYRYFYPDREGAYTWWSYMFNARANNAGWRIDYFCVSERLQDKLVSADIH 235 Query: 243 TKPRGWTKPSDHTPVIVSLDI 263 G SDH PV + ++I Sbjct: 236 DHILG----SDHCPVELVINI 252 >gi|254447686|ref|ZP_05061152.1| exodeoxyribonuclease III [gamma proteobacterium HTCC5015] gi|198263029|gb|EDY87308.1| exodeoxyribonuclease III [gamma proteobacterium HTCC5015] Length = 256 Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 70/264 (26%), Positives = 115/264 (43%), Gaps = 13/264 (4%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + V + NVN IRA W++ N D++C+QETK + E YH Sbjct: 1 MYRVISVNVNGIRAAARKGFFEWMQAQNADVVCIQETKAQAHQLDDEVFHPAGYHRYLFD 60 Query: 62 --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GVA+ +K +P +++ + D + R+IEA F L + ++Y+ G+ Sbjct: 61 AEKKGYSGVALYAKQKPDDVIYGFGEEGFDREGRYIEARFG----DLSVASIYVHSGSSG 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + + +L + E I GD+NI D N + ++ F E Sbjct: 117 DERQQEKYRFMDF-YLPKLKAQGEDGRRYILCGDWNIAHTKADIKNWRGNQKNSGFLPEE 175 Query: 180 RQSFQK-LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R +M + DA R H Y++W +W+ N G RID+ ++SP + S Sbjct: 176 RAWLDTLFDDMQWVDAFREIEQEEHSYTWWSNRGQAWANNTGWRIDYHIVSPNLKGTVKS 235 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 I T+ R SDH P+ + D Sbjct: 236 TDIYTQER----FSDHAPLTIDYD 255 >gi|325854960|ref|ZP_08171676.1| exodeoxyribonuclease III [Prevotella denticola CRIS 18C-A] gi|325483938|gb|EGC86878.1| exodeoxyribonuclease III [Prevotella denticola CRIS 18C-A] Length = 249 Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 68/260 (26%), Positives = 114/260 (43%), Gaps = 12/260 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + K N D CLQETK + + + Sbjct: 1 MKLISWNVNGLRACVGKDFEQQFKALNADFFCLQETKMQAGQLDIS-FPGYASYWNYADK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K++P+++ + D+ D + R I + + + G Sbjct: 60 KGYSGTAIFTKHKPLDVTYGIGMDEHDHEGRVITLEMD-DFYLVTVYTPNSQDGLRRLDY 118 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + ++ + RL+ ++P++ GD N+ + D NP +A FT E R+ Sbjct: 119 R-----MKWEKDFQDYLHRLDRKKPVVVCGDMNVAHEEIDIKNPKTNRRNAGFTDEEREK 173 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 +L + GF D R + YS+W Y + +N G RID+ ++S L A+I Sbjct: 174 MTQLLDSGFIDTFRTLYPEQVTYSWWSYRFRARERNTGWRIDYFLISERLRDRLEDAKIH 233 Query: 243 TKPRGWTKPSDHTPVIVSLD 262 T+ G SDH PV V L Sbjct: 234 TEIMG----SDHCPVEVDLK 249 >gi|52141752|ref|YP_085078.1| exodeoxyribonuclease III [Bacillus cereus E33L] gi|51975221|gb|AAU16771.1| exodeoxyribonuclease III [Bacillus cereus E33L] Length = 252 Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 71/262 (27%), Positives = 123/262 (46%), Gaps = 14/262 (5%) Query: 4 VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + +WNVN +RA +++E+N DI CLQE K ++ + + Sbjct: 1 MKFISWNVNGLRAVIAKGGFLEYLEESNADIFCLQEIKLQEGQIDLNV-EDYYTYWNYAV 59 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G AI SK +P+ + L ++ D + R I F I LY P+ Sbjct: 60 KKGYSGTAIFSKKEPLSVTYGLGIEEHDQEGRVITLEFEG----FYIITLYTPNAK-RGL 114 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + D ++ W F + + L+ ++P+IF GD N+ + D NP + F+ E R+ Sbjct: 115 ERLDYRMKWEDDFRAYIKR-LDEKKPVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEERE 173 Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 F + GF D R + YS+W Y + +KN G R+D+ ++S + + A+ Sbjct: 174 KFTCILEEGFIDTYRYLYPDQEGAYSWWSYRMGARAKNIGWRLDYFVVSERIKNQIKDAK 233 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I+++ G SDH PV + ++ Sbjct: 234 INSEVMG----SDHCPVELHIN 251 >gi|325961961|ref|YP_004239867.1| exodeoxyribonuclease III [Arthrobacter phenanthrenivorans Sphe3] gi|323468048|gb|ADX71733.1| Exodeoxyribonuclease III [Arthrobacter phenanthrenivorans Sphe3] Length = 261 Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats. Identities = 70/258 (27%), Positives = 119/258 (46%), Gaps = 8/258 (3%) Query: 12 NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAIL 71 NS+RAR + AW++ ++ D++ +QETK +D NFP+E + + Y + G +NGVAI Sbjct: 2 NSLRARADRVEAWLQRSDCDVLAIQETKCKDDNFPWELFERMGYEVAHFGVNQWNGVAIA 61 Query: 72 SKYQPIEIVTHLPGDDLD----VQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDK 127 S+ ++ +RI +LY+P+G + K Sbjct: 62 SRVGLEDVERTFLDQPSFGKAGKDPVQEARAMAATCAGIRIWSLYVPNGRSLDDEHMPYK 121 Query: 128 ISWIKRFLRFASQRLELEEPLIF--AGDYNIIPQPHDCYNP--IIWENDACFTLEVRQSF 183 + W++ A + + + GD+NI P D ++ I + R +F Sbjct: 122 LKWLESLKTHAQELVTQDPQAQVALMGDWNIAPFDEDVWDIDLFINNRSTHVSPPERAAF 181 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 ++ GFTD +R +Y++WDY + K +G+RID ++ SP + + A ID Sbjct: 182 HAFESAGFTDVVRPYTPGPGVYTYWDYTQLRFPKKEGMRIDFVLASPALAARVTGASIDR 241 Query: 244 KPRGWTKPSDHTPVIVSL 261 + R SDH PV+V L Sbjct: 242 EERKGKGASDHAPVVVEL 259 >gi|226228755|ref|YP_002762861.1| exodeoxyribonuclease III [Gemmatimonas aurantiaca T-27] gi|226091946|dbj|BAH40391.1| exodeoxyribonuclease III [Gemmatimonas aurantiaca T-27] Length = 265 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 70/270 (25%), Positives = 121/270 (44%), Gaps = 15/270 (5%) Query: 4 VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + +WNVN +RA + +I+ + PD++CLQETK+E + + L + + + Sbjct: 1 MKIYSWNVNGLRAVLKKGLFMPFIETHQPDVLCLQETKSEREQVEID-LAGYHEYWNSAT 59 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY--------L 113 K Y+G AI S+ +P+ + +A T+ I + Sbjct: 60 TKGYSGTAIFSRTEPLSVTNGFAKAVAKKYTLVDDAGRDSETEGRVITAEFEKFFVVTVY 119 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 ++ + + LE+++P++F GD N+ D NP Sbjct: 120 TPNAKDDLSRLPLRSQHWDAAFLAHCKALEMKKPVVFCGDLNVAHTELDLANPKPNRGRK 179 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 FT E RQ FQ + GF D +R H + YS+W ++A+S ++N G RID++++S Sbjct: 180 GFTDEERQGFQSFLDAGFVDTLRMFHQGNGHYSWWSHFANSRARNVGWRIDYVLVSAALQ 239 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + +A I G SDH PV V+L + Sbjct: 240 KSVATAEIHADVMG----SDHCPVSVTLSL 265 >gi|50955808|ref|YP_063096.1| exodeoxyribonuclease III [Leifsonia xyli subsp. xyli str. CTCB07] gi|50952290|gb|AAT89991.1| exodeoxyribonuclease III [Leifsonia xyli subsp. xyli str. CTCB07] Length = 280 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 67/276 (24%), Positives = 110/276 (39%), Gaps = 9/276 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + VATWNVNSIR R+ + W+ + D + +QE K + + FP+E + Y + G Sbjct: 1 MRVATWNVNSIRTRVARVVDWMVREDVDALAMQEIKCKPEQFPYEAFEKAGYEVVLHGLN 60 Query: 64 SYNGVAILSKYQP------IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 +NGVAI S+ + + +R+ +LY+P+G Sbjct: 61 QWNGVAIASRLPIDEAEIGFPDMPGFLKGHDGPGLPTEARAIGATVEGVRLWSLYVPNGR 120 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACF 175 + Y K+ W+ L A L + L GD+N+ P D +P + + Sbjct: 121 ALDDPHYTYKLDWLAALLTNARSWLAEDPELPLALMGDWNVAPLDSDVGDPSLIPGVSTH 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 ++ + Y++WDY + +N+G+RID ++ S Sbjct: 181 ISPPERAAFAAFEQAGLIDVVRPI-VPEGYTYWDYKQLRFPRNEGMRIDFVLGSRAFADR 239 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271 + A I R PSDH PV+V L P Sbjct: 240 VVDASIHRAERKGDAPSDHVPVLVELADGRPEDADD 275 >gi|316931738|ref|YP_004106720.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris DX-1] gi|315599452|gb|ADU41987.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris DX-1] Length = 270 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 79/268 (29%), Positives = 127/268 (47%), Gaps = 8/268 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62 +T+ TWN+NS+R RI +A ++K PDI+CLQETK D FP + + L Y HI GQ Sbjct: 3 LTLTTWNINSVRLRIDLVAKFLKAQRPDILCLQETKCPDDAFPLKRFKRLGYDHIALNGQ 62 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT-- 120 K Y+GVA++SK D +D + + + L + N Y+P G I Sbjct: 63 KGYHGVAVISKLPFAATDIRTFCDIIDSRHISVSVKTADDAPPLVLHNFYVPAGGDIPDP 122 Query: 121 --STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL- 177 + K+ K+S++ ++ I GD N+ P HD ++ T Sbjct: 123 AVNPKFKHKLSFLDEMKACEPLHPAGDQRHILVGDLNVAPHEHDVWSHKQLLKVVSHTPV 182 Query: 178 EVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSL 235 E + L+ + D R +Y++W Y A W+ ++G R+DHI +S Sbjct: 183 ECEKLLAVLRAGNWVDVARERIPLDQKVYTWWSYRAADWTVGDRGRRLDHIWVSEALKDR 242 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + +I R W +PSDH PV +++++ Sbjct: 243 VTDFKILRDARSWDRPSDHVPVTMTMEL 270 >gi|323490286|ref|ZP_08095501.1| exodeoxyribonuclease III [Planococcus donghaensis MPA1U2] gi|323395956|gb|EGA88787.1| exodeoxyribonuclease III [Planococcus donghaensis MPA1U2] Length = 251 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 66/261 (25%), Positives = 113/261 (43%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + E N D+ CLQE K ++ + L + + Sbjct: 1 MKLISWNVNGLRAVMKKGFMDFFTEVNADVFCLQEIKLQEGQIEMD-LPGYYTYWNYAHK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +P+ + L ++LD + R I F + + HG Sbjct: 60 KGYSGTAIFTKQKPVAVQYGLGLEELDTEGRIITLEFDSY-YVITVYTPNSQHGLLRLDY 118 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + + + L+ +P++ GD N+ + D NP + ++ FT E R Sbjct: 119 RL-----LWEEAILSFVKTLDNHKPVLLCGDLNVAHEEIDLKNPKANKKNSGFTPEERSK 173 Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 + GF D R + YS+W Y ++ KN G RID+ + S L +A+I Sbjct: 174 MTQFLESGFVDTFRYFYPEEEGHYSWWSYRSNCREKNVGWRIDYFLASQRLVPELQNAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 G SDH PV + ++ Sbjct: 234 HKDIWG----SDHCPVELQIE 250 >gi|319790081|ref|YP_004151714.1| exodeoxyribonuclease III Xth [Thermovibrio ammonificans HB-1] gi|317114583|gb|ADU97073.1| exodeoxyribonuclease III Xth [Thermovibrio ammonificans HB-1] Length = 259 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 79/264 (29%), Positives = 136/264 (51%), Gaps = 9/264 (3%) Query: 4 VT-VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + TWNVNS+RAR+ ++ W++ D + LQETK D+ FP + L Y + GQ Sbjct: 1 MRSLVTWNVNSVRARLSYISYWLERERWDFLALQETKVPDELFPEGVFKELGYGVVYHGQ 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K+YNGVA+ K +P+ ++ P + D + T+ + I N+Y+P G S Sbjct: 61 KAYNGVALCFKGEPLRVLKGWPDGEDDEKRLI-----TVWLEPFPIVNVYVPRGGEKGSE 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 ++ K+ ++ + F + +EPL GD+N+ D Y+P +W F + RQ+ Sbjct: 116 RHAFKLYFLTKLKLFLQESFSPDEPLAVVGDFNVARSELDVYDPAVWRGRPGFMEDERQA 175 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F++L + G D R H Y++WD +++N+G+RID+I+++ R+ Sbjct: 176 FEELLSFGLFDLFRELHPDEPGYTWWDIETGGFARNRGLRIDYILVTEPLLKRAQECRVL 235 Query: 243 TKPR---GWTKPSDHTPVIVSLDI 263 + R G PSDH P++ + I Sbjct: 236 REARRKLGGLLPSDHAPLVAAFRI 259 >gi|294674336|ref|YP_003574952.1| exodeoxyribonuclease III [Prevotella ruminicola 23] gi|294473057|gb|ADE82446.1| exodeoxyribonuclease III [Prevotella ruminicola 23] Length = 249 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 71/260 (27%), Positives = 115/260 (44%), Gaps = 12/260 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + +E + D CLQETK + + + + Sbjct: 1 MKLISWNVNGLRACEGKGFSDTFRELDADFFCLQETKMQAGQLDL-AFEGYESYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K+ P+ + + D+ D + R I + Sbjct: 60 KGYSGTAIFTKHHPLSVTYGIGIDEHDHEGRVITLEMEDFYL-----VTCYTPNSQDGLK 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + D +++W F + L+ ++P+I GD N+ Q D NP +A FT + R+ Sbjct: 115 RLDYRMTWENDFRAYLKG-LDAKKPVILCGDLNVAHQEIDLKNPKTNRMNAGFTDQEREQ 173 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F L GFTD+ R + YS+W Y + KN G RID+ ++S + ARI Sbjct: 174 FSTLLASGFTDSFRYKYPEQVTYSWWSYRFQARQKNAGWRIDYFVISDRLRERMDDARIH 233 Query: 243 TKPRGWTKPSDHTPVIVSLD 262 T+ G SDH PV ++L Sbjct: 234 TQILG----SDHCPVELTLK 249 >gi|229157316|ref|ZP_04285394.1| Exodeoxyribonuclease [Bacillus cereus ATCC 4342] gi|228626043|gb|EEK82792.1| Exodeoxyribonuclease [Bacillus cereus ATCC 4342] Length = 252 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 72/262 (27%), Positives = 124/262 (47%), Gaps = 14/262 (5%) Query: 4 VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + +WNVN +RA +++E+N DI CLQE K +D L+ + Sbjct: 1 MKLISWNVNGLRAVIAKGGFLEYLEESNADIFCLQEIKLQDGQIDLN-LEEYYTYWNYAV 59 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G AI SK +P+ + L ++ D + R I F I LY P+ + Sbjct: 60 KKGYSGTAIFSKKEPLSVTYGLGIEEHDQEGRVITLEFE----DFYIITLYTPN-SKRGL 114 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + D ++ W F + + L+ ++P++F GD N+ + D NP + F+ E R+ Sbjct: 115 ERLDYRMKWEDDFRVYIKR-LDEKKPVVFCGDLNVAHKEIDLKNPKSNRKNPGFSDEERE 173 Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 F + GF D R + YS+W Y + KN G R+D+ ++S + A+ Sbjct: 174 KFTCILEEGFIDTYRYLYPNQEGAYSWWSYRMGARVKNIGWRLDYFVVSERMKDQITEAK 233 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I+++ G SDH PV + ++ Sbjct: 234 INSEVMG----SDHCPVELHIN 251 >gi|299133181|ref|ZP_07026376.1| exodeoxyribonuclease III Xth [Afipia sp. 1NLS2] gi|298593318|gb|EFI53518.1| exodeoxyribonuclease III Xth [Afipia sp. 1NLS2] Length = 271 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 87/268 (32%), Positives = 125/268 (46%), Gaps = 9/268 (3%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQK 63 T+ TWN+NS+R RI +A ++K PD++CLQETK D FP + Q L Y HI GQK Sbjct: 4 TLTTWNINSVRLRIDLVAKFLKSRRPDVLCLQETKCIDDAFPLKRFQRLGYEHIALNGQK 63 Query: 64 SYNGVAILSKYQPI-EIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT-- 120 Y+GVAI+SK + + V G + L + N Y+P G I Sbjct: 64 GYHGVAIVSKRPFVSKDVRTFCGKIDSRHISVAFGESAGLSAPLVLHNFYVPAGGDIPDP 123 Query: 121 --STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL- 177 + K++ K+S++ A + + I GD N+ P HD ++ N T Sbjct: 124 AANPKFEHKLSFLDEMRDCAPLHPQGDARHILVGDLNVAPHEHDVWSHKQLLNVVSHTPV 183 Query: 178 EVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSL 235 E + + D R +Y++W Y A W+ N+G R+DHI +SP Sbjct: 184 ECEKLLAVQSQGNWVDIARQRIPMDEKVYTWWSYRAADWTVGNRGRRLDHIWVSPALGDK 243 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + RI R W +PSDH PV LDI Sbjct: 244 VSDFRITRDARSWERPSDHVPVTAVLDI 271 >gi|91216089|ref|ZP_01253057.1| exodeoxyribonuclease [Psychroflexus torquis ATCC 700755] gi|91185606|gb|EAS71981.1| exodeoxyribonuclease [Psychroflexus torquis ATCC 700755] Length = 260 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 71/264 (26%), Positives = 129/264 (48%), Gaps = 15/264 (5%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY---HIET 59 + + ++NVN IRA + L W+K + D++C QETK + + +++ Y + + Sbjct: 7 MKIVSYNVNGIRAALKKGLIDWLKTTDADVVCFQETKAQPEQIDNSIFENIGYNNCYWYS 66 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+ V IL K +P + D +D + R + F + I +LYLP G Sbjct: 67 AEKKGYSSVGILCKSEPKHVEYGTGIDYMDREGRNLRVDFE----DVSIMSLYLPSG--T 120 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-E 178 + + K +++ F + + PL+ GDYNI + D ++P+ + + F E Sbjct: 121 NDARLNYKFTYMDDFKVYIENLKKEIPPLVICGDYNICHEAIDIHDPVRLKTVSGFLPAE 180 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 + L++ GF D+ R ++ YS+W Y A++ NKG R+D+++++ E L+ Sbjct: 181 REWLSKFLKDSGFVDSFRKLNEDVVHYSWWSYRANARQNNKGWRLDYLLVAQEIEDLVFR 240 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 + I K SDH PV++ L Sbjct: 241 SVILPDA----KHSDHCPVLLELK 260 >gi|134297280|ref|YP_001121015.1| exodeoxyribonuclease III Xth [Burkholderia vietnamiensis G4] gi|134140437|gb|ABO56180.1| exodeoxyribonuclease III Xth [Burkholderia vietnamiensis G4] Length = 257 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 62/264 (23%), Positives = 112/264 (42%), Gaps = 14/264 (5%) Query: 3 VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59 ++ V T N+N IR A W+ E N D +C+QE K + P E ++ + + Sbjct: 1 MMRVITANLNGIRSAAKKGFFDWLGEQNADCVCVQEIKVSADDLPAEFVEPHGFKSYFHH 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G + S+ +P +++ + D + R++EA + L + ++Y+P G+ Sbjct: 61 AAKKGYSGAGVYSRREPDDVIIGFGSSEFDPEGRYVEARYG----KLSVVSVYVPSGSSG 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + L+ + +I GD NI+ + D N + ++ E Sbjct: 117 EERQQA--KYRFMDEFMPHLAELKQQREVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEE 174 Query: 180 RQSFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R +L + G+ D R Y++W +++KN G RID+ + +P S Sbjct: 175 RAWLTQLFDEVGYVDVFRTLDPRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGVAGTAKS 234 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 I K SDH P+ V D Sbjct: 235 TSIFKDI----KFSDHAPLTVDYD 254 >gi|260909404|ref|ZP_05916112.1| exodeoxyribonuclease III [Prevotella sp. oral taxon 472 str. F0295] gi|260636496|gb|EEX54478.1| exodeoxyribonuclease III [Prevotella sp. oral taxon 472 str. F0295] Length = 249 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 67/260 (25%), Positives = 104/260 (40%), Gaps = 12/260 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + + K + D CLQETK + + + Sbjct: 1 MKFISWNVNGLRAVVGKDFENIFKSLDADFFCLQETKMQAGQLDLQ-FDGYESFWNYADK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI ++++P+ + + D D + R I + Sbjct: 60 KGYSGTAIYTRHKPLNVTYGIGIDQHDHEGRVITLEMPTFFLVTVYTPNSQDELRRLDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + L+ +P+I GD N+ Q D NP +A FT E RQ Sbjct: 120 MQ------WEDDFQAYLHDLDKRKPVIVCGDMNVAHQEIDLKNPKTNRRNAGFTDEERQK 173 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 +L GFTD R + YS+W Y + +N G RID+ ++S S + A+I Sbjct: 174 MTQLLGAGFTDTFRWKYPEEITYSWWSYRFKARERNTGWRIDYFLVSDRLQSEVLDAKIH 233 Query: 243 TKPRGWTKPSDHTPVIVSLD 262 T G SDH PV + L Sbjct: 234 TDILG----SDHCPVELELK 249 >gi|194364073|ref|YP_002026683.1| exodeoxyribonuclease III Xth [Stenotrophomonas maltophilia R551-3] gi|194346877|gb|ACF50000.1| exodeoxyribonuclease III Xth [Stenotrophomonas maltophilia R551-3] Length = 266 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 66/275 (24%), Positives = 112/275 (40%), Gaps = 24/275 (8%) Query: 4 VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + ++N N IR A W + + D++C+QETK ++ + +H Sbjct: 1 MRIISFNANGIRSAATKGFLDWFRAQDADVLCIQETKAQEDQLTDPMFRPDGHHCFYRDA 60 Query: 62 --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GVAI SK +P +++T L D + R+IEA + L + + Y+P G+ Sbjct: 61 ITKKGYSGVAIYSKREPDQVITSLGWAPFDDEGRYIEARYG----NLSVVSFYIPSGS-S 115 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K ++ + + GD+NI+ D N + ++ E Sbjct: 116 GDLRQGFKFEVMEWLRPILEEWARSGRDYVLCGDWNIVRSALDIKNWKSNQKNSGCLPEE 175 Query: 180 RQSFQKLQNMG-----------FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 R L + DA R + T Y++W + + N G RID+ + Sbjct: 176 RDWLNALCADHGQATDVATGRGWADAYRLLNPTGEDYTWWSNRGAARANNVGWRIDYQFI 235 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +P L S I R SDH P IV D+ Sbjct: 236 TPGLRDRLRSCSIYRDER----FSDHAPFIVDYDL 266 >gi|134103032|ref|YP_001108693.1| AP endonuclease [Saccharopolyspora erythraea NRRL 2338] gi|291005211|ref|ZP_06563184.1| AP endonuclease [Saccharopolyspora erythraea NRRL 2338] gi|133915655|emb|CAM05768.1| AP endonuclease, family 1:exodeoxyribonuclease III xth [Saccharopolyspora erythraea NRRL 2338] Length = 265 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 62/265 (23%), Positives = 104/265 (39%), Gaps = 6/265 (2%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IET 59 ++TV+T NVN +RA W+ D++C+QET+ E P +H + Sbjct: 1 MLTVSTVNVNGLRAAAKKGFVEWLAATGSDVVCMQETRAEPDQLPAAVRSPEGWHTQLAP 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 K +GVAI S+ +P E+ + D R++EATF + G P Sbjct: 61 SADKGRSGVAIYSRREPDEVRVGFGSAEFDESGRYVEATFGDVVVA-SLYLPSGDVGTPR 119 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K ++ ++ + + GD+NI + D N + A F E Sbjct: 120 QDEKERFMKEFLVHLTDLRARAEAAGKQALVCGDWNIAHREIDLKNWKGNQKSAGFLPEE 179 Query: 180 RQSFQKLQNM--GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 R ++ + R + YS+W Y ++ + G RID++ +P Sbjct: 180 RAWLTQVFDEVGYVDVVRRLHPEGPGPYSWWSYRGKAFDNDSGWRIDYLAATPALAERCT 239 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLD 262 A ++ P + SDH PV D Sbjct: 240 DAFVERAPSYDKRWSDHAPVTAVFD 264 >gi|289524110|ref|ZP_06440964.1| exodeoxyribonuclease III [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289502766|gb|EFD23930.1| exodeoxyribonuclease III [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 261 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 87/264 (32%), Positives = 131/264 (49%), Gaps = 4/264 (1%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 M T++T+N NS+R+R+ L W+ +N D++CLQETK D FP S YH+ Sbjct: 1 MPFFTISTFNANSVRSRLQILERWLIKNPVDVLCLQETKVSDDQFPASAFDSWGYHVFFR 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 G+K+Y GVAI + +P EI+ + + L + N Y+P G I Sbjct: 61 GRKAYAGVAIACQGEPNEIIYG---FPDGKDGKDDDRLMMARFDDLWVINTYVPQGKSID 117 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 Y K + +RFL + ++ +I+ GD N+ P+ D P N CF E+R Sbjct: 118 HPDYRYKKDFFRRFLDLLESEFKADDKIIWVGDMNVAPEEKDVTKPETKRNHVCFHEEIR 177 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYY-ADSWSKNKGIRIDHIMLSPEATSLLHSA 239 F +++ GF D R H Y+FWDY ++ +N G R+DHI+ +P Sbjct: 178 DIFDTVKSWGFVDVFRKHHPEEGQYTFWDYRVKNALERNIGWRVDHILATPSVADRSVDC 237 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 ID +PR W KPSDHT ++ D+ Sbjct: 238 YIDREPRSWEKPSDHTFLVGIFDL 261 >gi|269216697|ref|ZP_06160551.1| exodeoxyribonuclease III [Slackia exigua ATCC 700122] gi|269129931|gb|EEZ61014.1| exodeoxyribonuclease III [Slackia exigua ATCC 700122] Length = 264 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 68/269 (25%), Positives = 109/269 (40%), Gaps = 14/269 (5%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + D+ LQETK ++ + L + + Sbjct: 1 MRLISWNVNGLRAVVKKGFNEAFAALDADVFALQETKLQEGQIELD-LPGYVQNWSYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITS 121 K Y+G A+ S+ +P+++V H+ LD + R F + N Sbjct: 60 KGYSGTAVFSREEPLQVVHHVGTPALDTEGRICACEFEKFWFVDVYTPNAQPELARLEHR 119 Query: 122 TKYDDKISWIKRFLRFASQRLELEE------PLIFAGDYNIIPQPHDCYNPIIWENDACF 175 +D + L L P+I GD+N+ Q D NP + F Sbjct: 120 MAWDAAFREFCKNLEAGVVPEGLGYASAEPKPVIMCGDFNVAHQEIDLKNPRSNRGNPGF 179 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 + E R SF L + GF D R H YS+W Y ++ N G RID+ ++S Sbjct: 180 SDEERSSFTSLLDAGFADTFRMLHPDLEGAYSWWSYRFNARKNNAGWRIDYFLVSDALRG 239 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + SA I + G SDH PV + + + Sbjct: 240 AIESASIYDEVMG----SDHCPVGLDIAL 264 >gi|262341194|ref|YP_003284049.1| exodeoxyribonuclease [Blattabacterium sp. (Blattella germanica) str. Bge] gi|262272531|gb|ACY40439.1| exodeoxyribonuclease [Blattabacterium sp. (Blattella germanica) str. Bge] Length = 253 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 79/261 (30%), Positives = 127/261 (48%), Gaps = 12/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60 + + ++N+N IR+ I L+ WI+ +NPDI+CLQE K + L Y + + Sbjct: 1 MKIISYNINGIRSGINKGLSDWIESSNPDILCLQEIKAFPEQIDTNIFDQLGYNHYWFSS 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GV IL K +PI + + +D + R + L I +LYLP GN + Sbjct: 61 EKKGYSGVGILCKEKPIHVEYGIGLSSIDQEGRVLRIDMK----NLSIISLYLPSGNNMK 116 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K ++K F + LI GDYNI D Y+P+ + + F E R Sbjct: 117 KR-LNFKFFFMKNFFSHVKKIRNQFNHLIICGDYNICHHEIDIYDPMKHQEISGFLPEER 175 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + N+GF D+ R H YS+W Y +++ NKG RID++M+S + +A Sbjct: 176 EWMTHFLNLGFVDSFRNCVQEAHHYSWWSYRSNARKNNKGWRIDYVMVSSSLKEKIRNAY 235 Query: 241 IDTKPRGWTKPSDHTPVIVSL 261 + + K SDH PV++ + Sbjct: 236 LLSDV----KLSDHCPVVLEI 252 >gi|299141239|ref|ZP_07034376.1| exodeoxyribonuclease III [Prevotella oris C735] gi|298577199|gb|EFI49068.1| exodeoxyribonuclease III [Prevotella oris C735] Length = 250 Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats. Identities = 69/261 (26%), Positives = 111/261 (42%), Gaps = 12/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + + + + N D CLQETK + + + + Sbjct: 1 MKFISWNVNGLRACVGKDFSQSFETLNADFFCLQETKMQAGQLDLQ-FPGYTSYWNYADK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI ++ +PI + + D+ D + R I + + Sbjct: 60 KGYSGTAIYARKEPIAVTYGIGIDEHDHEGRVITLEYDNFFLVTVYTPNAQDGLRRLDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + RL+ ++P+I GD N+ Q D NP +A FT E R+ Sbjct: 120 M------TWEDDFQAYLHRLDEQKPVIVCGDLNVAHQEIDLKNPKSNRRNAGFTDEEREK 173 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 +L + GFTD R + YS+W Y + KN G RID+ ++S L A I Sbjct: 174 MTQLLSHGFTDTFRTLYPEQVTYSWWSYRFRAREKNAGWRIDYFLISDRLRPQLKDASIH 233 Query: 243 TKPRGWTKPSDHTPVIVSLDI 263 T+ G SDH P+ V L++ Sbjct: 234 TEIFG----SDHCPIEVDLEL 250 >gi|188997510|ref|YP_001931761.1| exodeoxyribonuclease III Xth [Sulfurihydrogenibium sp. YO3AOP1] gi|188932577|gb|ACD67207.1| exodeoxyribonuclease III Xth [Sulfurihydrogenibium sp. YO3AOP1] Length = 264 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 80/265 (30%), Positives = 126/265 (47%), Gaps = 6/265 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWI--KENNPDIICLQETKTEDKNFPFETLQSLNY-HIETC 60 + + T+NVNSI+AR + W+ + N+ D++C QE K EDKNFP E + L Y + + Sbjct: 1 MKICTFNVNSIKARKDLVIEWLNHRNNDIDVLCFQEIKVEDKNFPSEDFKKLGYVYQDIS 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 GQK YNGVA LSK + L + DVQ R + I + I Sbjct: 61 GQKGYNGVATLSKLEISHYQKGLNHEYFDVQKRVLI-DKIIEKEIFVINTYAPHGDLRGG 119 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 Y + + ++ GD NI + D Y+P++ + E R Sbjct: 120 EKYYYKLDWYKHFINFLKENFDFENQKIMLLGDLNIALEDIDVYDPVLLTDSIGTMPEER 179 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + ++L N+G D R + +++WDY + +N+G+RID+I++S + + Sbjct: 180 ELLRQLLNLGLIDTFRYLYPNKQQFTWWDYIGGAIWRNEGMRIDYILVSKPFLQYVKNVE 239 Query: 241 IDTKPRGW--TKPSDHTPVIVSLDI 263 +D PR KPSDH PVI+ L+I Sbjct: 240 VDLWPRRRRSPKPSDHAPVILDLEI 264 >gi|260464219|ref|ZP_05812412.1| exodeoxyribonuclease III Xth [Mesorhizobium opportunistum WSM2075] gi|259030022|gb|EEW31305.1| exodeoxyribonuclease III Xth [Mesorhizobium opportunistum WSM2075] Length = 289 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 77/266 (28%), Positives = 117/266 (43%), Gaps = 9/266 (3%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64 +ATWN+NS+R R+ + + E PD++CLQETK D+ FP + + L Y HI GQK Sbjct: 26 IATWNINSVRLRMPIVERLLVEQAPDVLCLQETKVPDELFPEKAFRKLGYEHIAFHGQKG 85 Query: 65 YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124 Y+GVA +++ + + +R + T +T+ + N Y+P G Sbjct: 86 YHGVATVARRPIAVVEKRRFCE--IEDSRHLSVTVRAGGKTILVHNFYVPAGGDEPDPVI 143 Query: 125 DDKISWIKRFLRFASQRLELEEPLI---FAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180 + K F+ + + + GD NI P HD ++ N T E Sbjct: 144 NKKFKHKLDFVAEMNAIRAEHDEVSASVLVGDLNIAPLEHDVWSHKQLLNVVSHTPVETE 203 Query: 181 QSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHS 238 + D +R + LY++W Y A W N+G R+DH+ SP Sbjct: 204 NFEAMRLAGNWIDLMRLNVPSEQKLYTWWSYRAQDWEASNRGRRLDHVWSSPNLVPSFTG 263 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIP 264 I RGW +PSDH PVI D+ Sbjct: 264 YEILRLARGWERPSDHVPVIARFDLD 289 >gi|238922913|ref|YP_002936426.1| exodeoxyribonuclease [Eubacterium rectale ATCC 33656] gi|238874585|gb|ACR74292.1| exodeoxyribonuclease [Eubacterium rectale ATCC 33656] Length = 251 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 66/261 (25%), Positives = 111/261 (42%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + + + D C+QE+K + + L + + + Sbjct: 1 MKFISWNVNGLRACVQKGFLDFFNSIDADFFCIQESKLQAGQIDLD-LPGYHQYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +P+ + + ++ D + R I + + Y P+ Sbjct: 60 KGYSGTAIFAKNEPLSVSYGIGIEEHDKEGRVITLEYD----NFYLVTCYTPNSQNELKR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 ++ W F + L+ ++P++ GD N+ D NP +A F+ E R Sbjct: 116 -LPYRMQWEDDFREYLKT-LDAKKPVVLCGDLNVAHNEIDLKNPKTNRKNAGFSDEERAK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +L GFTD R + +YS+W Y + KN G RID+ + S L A I Sbjct: 174 MTELLGSGFTDTFRYFYPDAEGIYSWWSYRFKAREKNAGWRIDYFITSKRINDKLKKAAI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 T G SDH PV V ++ Sbjct: 234 HTDVLG----SDHCPVEVDIE 250 >gi|111115360|ref|YP_709978.1| exodeoxyribonuclease III [Borrelia afzelii PKo] gi|216263647|ref|ZP_03435642.1| exodeoxyribonuclease III [Borrelia afzelii ACA-1] gi|110890634|gb|ABH01802.1| exodeoxyribonuclease III [Borrelia afzelii PKo] gi|215980491|gb|EEC21312.1| exodeoxyribonuclease III [Borrelia afzelii ACA-1] Length = 255 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 61/260 (23%), Positives = 104/260 (40%), Gaps = 12/260 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCG 61 + + +WNVN IRA + +++E PDI+C+QETK + P + + Y + Sbjct: 1 MKLISWNVNGIRAVLKKGFLEFVREYTPDILCVQETKALKEQLPRDLILENYYSYFSKSK 60 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 K Y+GV I SK +PI + L + E I + + Sbjct: 61 IKGYSGVCIYSKVKPIAVN------LLGKEIFDNEGRGLIAHYEDFVLINGYFPNSQALR 114 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + K+ ++ + + +I GD+NI D +P + + +E Sbjct: 115 RRLVYKLDFLSYVENLIDSFVNDGKNIIICGDFNIAHTEIDLISPDSNRDSPGYYIEETT 174 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 N G+ D R + Y++W Y + KN G RID+ +++ + + I Sbjct: 175 WLDSFLNKGYVDTFRIFNKEPGYYTWWSYRTRAREKNIGWRIDYFIVNEFFKRNVKKSLI 234 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 K G SDH PV + L Sbjct: 235 LDKVMG----SDHCPVFLEL 250 >gi|307693148|ref|ZP_07635385.1| exodeoxyribonuclease [Ruminococcaceae bacterium D16] Length = 252 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 72/262 (27%), Positives = 123/262 (46%), Gaps = 12/262 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + +E PD CLQETK E + +++ + + + Sbjct: 1 MKLISWNVNGLRACLKKGFLDFYQEQKPDFCCLQETKMEQGQADVDLGENMLEYWNSAEK 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G A+ + +QP+ + + ++ D + R I + + + N + Sbjct: 61 KGYSGTAVFTPHQPLAVRYGMGKEEHDHEGRLITLEYE------KFYLVCCYTPNSQSEL 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K D + LR L+ +P+I+ GD N+ + D NP +A FT + R+ Sbjct: 115 KRLDYRMEWEDDLRAYLMELDKVKPVIYCGDLNVAHREIDLKNPKTNRMNAGFTDQEREK 174 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 L + GFTD R + +YS+W Y + KN G RID+ ++S + + A I Sbjct: 175 MTTLLSSGFTDTFRFLYPDLEGVYSWWSYRFQARKKNAGWRIDYFIVSDRLQNAIKRAEI 234 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 T+ G SDH PV++ LDI Sbjct: 235 LTQVEG----SDHCPVLLELDI 252 >gi|316933480|ref|YP_004108462.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris DX-1] gi|315601194|gb|ADU43729.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris DX-1] Length = 256 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 91/259 (35%), Positives = 139/259 (53%), Gaps = 3/259 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+NVN++ R+ L AW+K P+I+CLQE K D +FP L+ Y GQK Sbjct: 1 MKIATFNVNNVNKRLPVLLAWLKAARPEIVCLQELKAADADFPEAALRRAGYTAAWAGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 S+NGVAIL++ + I + + + +G LY P+GNP K Sbjct: 61 SWNGVAILARRREIVVTRRRLPGAPHDKQS---RYIEAAVAGIIVGCLYAPNGNPQPGPK 117 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 +D+K++W+KR R A+ L+ P++ AGD+N++P P D Y W+ DA R+ F Sbjct: 118 FDEKLAWLKRLNRHAATLLKSGAPVVLAGDFNVVPTPADIYPTKSWDKDALVQPAPRKLF 177 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 L G+TDA+R H Y+FW Y+ + ++ G+RIDH++L P L A +D Sbjct: 178 AALLRQGWTDALRHCHPDDAPYTFWSYWRKRFERDAGLRIDHLLLDPSLALRLKRAGVDR 237 Query: 244 KPRGWTKPSDHTPVIVSLD 262 K R + SDH P + +D Sbjct: 238 KVRAAPEASDHAPAWIMID 256 >gi|331694970|ref|YP_004331209.1| exodeoxyribonuclease III Xth [Pseudonocardia dioxanivorans CB1190] gi|326949659|gb|AEA23356.1| exodeoxyribonuclease III Xth [Pseudonocardia dioxanivorans CB1190] Length = 289 Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats. Identities = 78/267 (29%), Positives = 134/267 (50%), Gaps = 7/267 (2%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFP---FETLQSLNYHI 57 M +V +ATWNVNS + R+ L W+ + PD++CLQETK D ++ + ++ Y + Sbjct: 1 MRLVRLATWNVNSAKTRLPRLLPWLDQRAPDVVCLQETKLADADWAETFDDAMRERGYEV 60 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT--LRIGNLYLPH 115 GQ +NGVA+LS+ ++ LP + + LR+ ++Y+P+ Sbjct: 61 AHYGQGRWNGVALLSRVGLDDVERGLPAEPRFPDDDSAPEARALTATCGGLRVTSVYVPN 120 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 G Y K+ W+ + + AGD NI P D ++P ++ + Sbjct: 121 GRTPDDPHYAYKLRWLDALQAMVADG--PTATSVVAGDMNIAPTDADVWDPSLFVDSTHV 178 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 T R++ + L +G D +R ++S+WDY A + ++KG+RID +++ +A Sbjct: 179 TPAERKALEALTGLGLHDVVRDRWPGQRVFSYWDYRAGRFHQDKGMRIDLVLVGDDAVGR 238 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262 + +A ID + R + PSDH PV+V LD Sbjct: 239 VQAAWIDRQARKGSGPSDHAPVMVDLD 265 >gi|329768092|ref|ZP_08259601.1| exodeoxyribonuclease III [Gemella haemolysans M341] gi|328838247|gb|EGF87859.1| exodeoxyribonuclease III [Gemella haemolysans M341] Length = 254 Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats. Identities = 68/261 (26%), Positives = 112/261 (42%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + ++NVN +RA + N K+ + D CLQETK + + + + Sbjct: 1 MKCISFNVNGLRAIVGKNFEEDFKKLDADFFCLQETKMQAGQLDLQ-FNGYYSYFNYAER 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K++PI + + ++ D + R I + + I G+ + Sbjct: 60 KGYSGTAIYTKHEPINVTYGIGIEEHDTEGRVITLEY---DKFFFITVYTPNSGSELKRL 116 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 +Y + + L + ++ GD N+ D NP +A FT E R+ Sbjct: 117 EYR---MSWEEDFKNYLLELNKTKGIVVCGDLNVAHTEIDLKNPKSNTKNAGFTQEEREK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F KL + GF D R + YS+W Y ++ N G RID+ ++S + L SA I Sbjct: 174 FTKLLDAGFIDTFRYYNPDLTGAYSWWSYRFNARKNNAGWRIDYFLVSRDLEKYLESAAI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 + G SDH PV + L Sbjct: 234 HNEIFG----SDHCPVELVLK 250 >gi|307823885|ref|ZP_07654113.1| exodeoxyribonuclease III Xth [Methylobacter tundripaludum SV96] gi|307735179|gb|EFO06028.1| exodeoxyribonuclease III Xth [Methylobacter tundripaludum SV96] Length = 254 Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats. Identities = 66/263 (25%), Positives = 111/263 (42%), Gaps = 14/263 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + +WNVN +RA A + + D I LQETK + Y + + Sbjct: 1 MKIISWNVNGVRAVQSKGFAETLALLDADCILLQETKAQADQIDKALEGIDGYRVYSNCA 60 Query: 62 -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GV ILS+ +P+++++ + + D + R I A F + G + Sbjct: 61 ERKGYSGVTILSRKEPLQVISDIGIVEHDREGRVIVAEFE---NFFLLNVYVPNSGEALA 117 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND-ACFTLEV 179 Y ++L+ ++PLI GD+N+ Q D P N A +T Sbjct: 118 RLDYRQTWDIEF---LAYCRQLQKKKPLIACGDFNVAHQEIDIARPKPNYNKSAGYTQVE 174 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 F + + G D R H YS+W + + ++N G RID+++ S + A Sbjct: 175 IDGFSRFLDAGLVDTFRHFHPDTVAYSWWSFRGGARARNVGWRIDYVLTSKTLAGNVKQA 234 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 I + G SDH PV + +D Sbjct: 235 FILPEISG----SDHCPVGIEID 253 >gi|240140848|ref|YP_002965328.1| Exodeoxyribonuclease III (Exonuclease III) (EXO III) (AP endonuclease VI) [Methylobacterium extorquens AM1] gi|240010825|gb|ACS42051.1| Exodeoxyribonuclease III (Exonuclease III) (EXO III) (AP endonuclease VI) [Methylobacterium extorquens AM1] Length = 269 Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats. Identities = 75/267 (28%), Positives = 126/267 (47%), Gaps = 7/267 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62 +TV TWN+NS+R RI ++ +++E PD++CLQETK D FP + + Y +I GQ Sbjct: 3 LTVTTWNINSVRLRIESVLRFLREAQPDVLCLQETKCPDDLFPLKAFKGSGYENIVFAGQ 62 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLD-VQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 K YNGVAI+S++ + + D + + + + Y+P G + Sbjct: 63 KGYNGVAIISRFPLLTRDVMSFCERPDARHISAVLGPEAGPAAGIVLHDFYVPAGGDMPH 122 Query: 122 TKYDDKISWIKRFLRFASQR--LELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K + FL + P I GD N+ P HD ++ + T Sbjct: 123 RDLNPKFAHKLDFLSELRVWGGRRVSGPAILVGDLNVAPLEHDVWSHKQLLDVVSHTPVE 182 Query: 180 RQS--FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLL 236 ++ + + A T + +Y++W Y + +W NKG R+DH +SP+ + Sbjct: 183 TEALETLRGEAGWIDAARLLTPEPEKIYTWWSYRSPNWELANKGRRLDHTWVSPDLAGTV 242 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263 + + RGW KPSDH PV ++L++ Sbjct: 243 RRVAVFREARGWEKPSDHVPVTLTLEL 269 >gi|281423696|ref|ZP_06254609.1| exodeoxyribonuclease III [Prevotella oris F0302] gi|281402248|gb|EFB33079.1| exodeoxyribonuclease III [Prevotella oris F0302] Length = 250 Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats. Identities = 69/261 (26%), Positives = 110/261 (42%), Gaps = 12/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + + + + N D CLQETK + + + + Sbjct: 1 MKFISWNVNGLRACVGKDFSQSFETLNADFFCLQETKMQAGQLDLQ-FPGYTSYWNYADK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI ++ +PI + + D+ D + R I + + Sbjct: 60 KGYSGTAIYARKEPIAVTYGIGIDEHDHEGRVITLEYDNFFLVTVYTPNAQDGLRRLDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + RL+ ++P+I GD N+ Q D NP +A FT E R Sbjct: 120 M------TWEDDFQAYLHRLDEQKPVIVCGDLNVAHQEIDLKNPKSNRRNAGFTDEERDK 173 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 +L + GFTD R + YS+W Y + KN G RID+ ++S L A I Sbjct: 174 MTQLLSHGFTDTFRTLYPEQVTYSWWSYRFRAREKNAGWRIDYFLISDRLRPQLKDASIH 233 Query: 243 TKPRGWTKPSDHTPVIVSLDI 263 T+ G SDH P+ V L++ Sbjct: 234 TEIFG----SDHCPIEVDLEL 250 >gi|323344424|ref|ZP_08084649.1| exodeoxyribonuclease III [Prevotella oralis ATCC 33269] gi|323094551|gb|EFZ37127.1| exodeoxyribonuclease III [Prevotella oralis ATCC 33269] Length = 249 Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats. Identities = 63/259 (24%), Positives = 102/259 (39%), Gaps = 12/259 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + K + D CLQETK + + + Sbjct: 1 MKLISWNVNGLRACVGKDFETSFKSLDADFFCLQETKMQAGQLDL-AFNGYQSYWNYADK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K P+ + + D+ D + R I + Sbjct: 60 KGYSGTAIFTKQTPLNVTYGMGIDEHDHEGRVITLETENFFLVTVYTPNSQDELRRLEYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + L+ +P+I GD N+ + D NP +A FT E R+ Sbjct: 120 M------RWEDDFKAYLLALDARKPVIVCGDMNVAHEEIDIKNPKTNRRNAGFTDEEREK 173 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 +L GF D R + YS+W Y + +N G RID+ ++S + A+I Sbjct: 174 MTELLAGGFIDTFRTLYPEQVTYSWWSYRFRARERNTGWRIDYFLISERLKERIADAKIH 233 Query: 243 TKPRGWTKPSDHTPVIVSL 261 T G SDH P+ + L Sbjct: 234 TDIYG----SDHCPIELDL 248 >gi|148251797|ref|YP_001236382.1| putative exodeoxyribonuclease III (xthA) [Bradyrhizobium sp. BTAi1] gi|146403970|gb|ABQ32476.1| putative exodeoxyribonuclease III (xthA) [Bradyrhizobium sp. BTAi1] Length = 271 Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats. Identities = 78/271 (28%), Positives = 121/271 (44%), Gaps = 11/271 (4%) Query: 4 VTVA--TWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETC 60 + + TWN+NS+R RI +A IK+ PD++CLQETK D FP + + L Y HI Sbjct: 1 MRLVLTTWNINSVRLRIDLVAKLIKQVRPDVLCLQETKCIDDAFPLKRFKRLGYEHIALN 60 Query: 61 GQKSYNGVAILSKYQPIEI-VTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 GQK Y+GVA++SK+ V + L + N Y+P G I Sbjct: 61 GQKGYHGVAVISKWPFDSTGVRTFCDKVDSRHISVAFGEKAQLARPLVLHNFYVPAGGDI 120 Query: 120 T----STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + K++ K+ ++ ++ I GD N+ P HD ++ Sbjct: 121 PDPALNPKFEHKLQFLDEMKACEPLHPRGDDRHILVGDLNVAPHEHDVWSHKQLLKVVSH 180 Query: 176 TLEVRQSFQKLQNMGFTDAI--RATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEA 232 T + Q+ G + + +Y++W Y A W+ N+G R+DHI +S Sbjct: 181 TPIECEKLLAAQSHGAWVDVARERIPMSEKVYTWWSYRAADWTVGNRGRRLDHIWVSRAL 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + I R W +PSDH PV V+LD+ Sbjct: 241 KDNVTDFSILRDARSWERPSDHVPVTVTLDV 271 >gi|323483337|ref|ZP_08088727.1| hypothetical protein HMPREF9474_00476 [Clostridium symbiosum WAL-14163] gi|323691163|ref|ZP_08105441.1| exodeoxyribonuclease III [Clostridium symbiosum WAL-14673] gi|323403435|gb|EGA95743.1| hypothetical protein HMPREF9474_00476 [Clostridium symbiosum WAL-14163] gi|323504773|gb|EGB20557.1| exodeoxyribonuclease III [Clostridium symbiosum WAL-14673] Length = 251 Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats. Identities = 75/259 (28%), Positives = 114/259 (44%), Gaps = 13/259 (5%) Query: 5 TVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +WNVN +RA + KE + DI C+QE+K + E L + +K Sbjct: 3 KLISWNVNGLRACVGKGFLDIFKELDADIFCIQESKLQGGQIDLE-LDGYYQYWSYAEKK 61 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 Y+G A+ +K +P+ + L + D + R I A F + + Sbjct: 62 GYSGTALFTKEEPLSVTYGLGIEAHDHEGRVITAEFPD-----YYVITCYTPNSQDGLAR 116 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 ++ W FL + + LE +P+IF GD N+ + D NP +A FT E R F Sbjct: 117 LPYRMQWEDDFLSYLKK-LEEHKPVIFCGDLNVAHREIDLKNPKSNRKNAGFTDEERGKF 175 Query: 184 QKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 +L GF D R + +YS+W Y + KN G RID+ +S L SA I Sbjct: 176 TQLLESGFIDTYRHFYPDQEGIYSWWSYRFKAREKNAGWRIDYFCVSKALEDRLESAMIH 235 Query: 243 TKPRGWTKPSDHTPVIVSL 261 T+ G SDH PV + + Sbjct: 236 TEIMG----SDHCPVELVI 250 >gi|118617059|ref|YP_905391.1| exodeoxyribonuclease III protein XthA [Mycobacterium ulcerans Agy99] gi|118569169|gb|ABL03920.1| exodeoxyribonuclease III protein XthA [Mycobacterium ulcerans Agy99] Length = 264 Score = 183 bits (464), Expect = 3e-44, Method: Composition-based stats. Identities = 73/257 (28%), Positives = 116/257 (45%), Gaps = 7/257 (2%) Query: 12 NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAIL 71 NSIR R+ + W++ + D++ +QETK D FP L L Y + G +NGVAI Sbjct: 2 NSIRTRLPRVLDWLERADVDVLAIQETKCSDTQFPALPLFELGYEVAHVGFNQWNGVAIA 61 Query: 72 SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT-----LRIGNLYLPHGNPITSTKYDD 126 S+ ++ G + A +R+ +LY+P+G + Y Sbjct: 62 SRVGIDDVQISFDGQPAWSGKPEVAAAAEARAVGATCGGVRVWSLYVPNGRALEDPHYTY 121 Query: 127 KISWIKRFLRFASQRLELEE--PLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ 184 K+ W+ A L+ + P+ AGD+NI P D +N + + R++F Sbjct: 122 KLDWLAALRDTAQCWLKNDPGAPIALAGDFNIAPTDEDVWNTEFFTGATRVSEPERKAFN 181 Query: 185 KLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK 244 + + FTD +R +Y++W Y + K +G+RID I+ SP + A+I Sbjct: 182 AIVDAQFTDLVRPFTPGPGVYTYWYYTQLRFPKKQGMRIDFILGSPALAGRVVDAQIVRD 241 Query: 245 PRGWTKPSDHTPVIVSL 261 R PSDH PV V L Sbjct: 242 ERKGKAPSDHAPVFVDL 258 >gi|30263740|ref|NP_846117.1| exodeoxyribonuclease III [Bacillus anthracis str. Ames] gi|47529159|ref|YP_020508.1| exodeoxyribonuclease III [Bacillus anthracis str. 'Ames Ancestor'] gi|49186585|ref|YP_029837.1| exodeoxyribonuclease III [Bacillus anthracis str. Sterne] gi|65321063|ref|ZP_00394022.1| COG0708: Exonuclease III [Bacillus anthracis str. A2012] gi|118478961|ref|YP_896112.1| exodeoxyribonuclease III [Bacillus thuringiensis str. Al Hakam] gi|165872421|ref|ZP_02217056.1| exodeoxyribonuclease III [Bacillus anthracis str. A0488] gi|167639873|ref|ZP_02398142.1| exodeoxyribonuclease III [Bacillus anthracis str. A0193] gi|170706859|ref|ZP_02897317.1| exodeoxyribonuclease III [Bacillus anthracis str. A0389] gi|177652038|ref|ZP_02934584.1| exodeoxyribonuclease III [Bacillus anthracis str. A0174] gi|190568466|ref|ZP_03021373.1| exodeoxyribonuclease III [Bacillus anthracis Tsiankovskii-I] gi|196034121|ref|ZP_03101531.1| exodeoxyribonuclease III [Bacillus cereus W] gi|196038388|ref|ZP_03105697.1| exodeoxyribonuclease III [Bacillus cereus NVH0597-99] gi|196044665|ref|ZP_03111900.1| exodeoxyribonuclease III [Bacillus cereus 03BB108] gi|218904866|ref|YP_002452700.1| exodeoxyribonuclease III [Bacillus cereus AH820] gi|225865717|ref|YP_002751095.1| exodeoxyribonuclease III [Bacillus cereus 03BB102] gi|227813360|ref|YP_002813369.1| exodeoxyribonuclease III [Bacillus anthracis str. CDC 684] gi|228916370|ref|ZP_04079939.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228928786|ref|ZP_04091820.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228935036|ref|ZP_04097866.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228947401|ref|ZP_04109692.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229092775|ref|ZP_04223913.1| Exodeoxyribonuclease [Bacillus cereus Rock3-42] gi|229123254|ref|ZP_04252458.1| Exodeoxyribonuclease [Bacillus cereus 95/8201] gi|229185967|ref|ZP_04313138.1| Exodeoxyribonuclease [Bacillus cereus BGSC 6E1] gi|229603277|ref|YP_002867975.1| exodeoxyribonuclease III [Bacillus anthracis str. A0248] gi|254721165|ref|ZP_05182956.1| exodeoxyribonuclease III [Bacillus anthracis str. A1055] gi|254735775|ref|ZP_05193481.1| exodeoxyribonuclease III [Bacillus anthracis str. Western North America USA6153] gi|254751095|ref|ZP_05203134.1| exodeoxyribonuclease III [Bacillus anthracis str. Vollum] gi|254759412|ref|ZP_05211437.1| exodeoxyribonuclease III [Bacillus anthracis str. Australia 94] gi|30258384|gb|AAP27603.1| exodeoxyribonuclease III [Bacillus anthracis str. Ames] gi|47504307|gb|AAT32983.1| exodeoxyribonuclease III [Bacillus anthracis str. 'Ames Ancestor'] gi|49180512|gb|AAT55888.1| exodeoxyribonuclease III [Bacillus anthracis str. Sterne] gi|118418186|gb|ABK86605.1| exodeoxyribonuclease III [Bacillus thuringiensis str. Al Hakam] gi|164711859|gb|EDR17401.1| exodeoxyribonuclease III [Bacillus anthracis str. A0488] gi|167512274|gb|EDR87651.1| exodeoxyribonuclease III [Bacillus anthracis str. A0193] gi|170128277|gb|EDS97146.1| exodeoxyribonuclease III [Bacillus anthracis str. A0389] gi|172082407|gb|EDT67472.1| exodeoxyribonuclease III [Bacillus anthracis str. A0174] gi|190560470|gb|EDV14448.1| exodeoxyribonuclease III [Bacillus anthracis Tsiankovskii-I] gi|195993195|gb|EDX57153.1| exodeoxyribonuclease III [Bacillus cereus W] gi|196024700|gb|EDX63372.1| exodeoxyribonuclease III [Bacillus cereus 03BB108] gi|196030796|gb|EDX69394.1| exodeoxyribonuclease III [Bacillus cereus NVH0597-99] gi|218539943|gb|ACK92341.1| exodeoxyribonuclease III [Bacillus cereus AH820] gi|225789176|gb|ACO29393.1| exodeoxyribonuclease III [Bacillus cereus 03BB102] gi|227006454|gb|ACP16197.1| exodeoxyribonuclease III [Bacillus anthracis str. CDC 684] gi|228597519|gb|EEK55168.1| Exodeoxyribonuclease [Bacillus cereus BGSC 6E1] gi|228660030|gb|EEL15666.1| Exodeoxyribonuclease [Bacillus cereus 95/8201] gi|228690573|gb|EEL44354.1| Exodeoxyribonuclease [Bacillus cereus Rock3-42] gi|228812254|gb|EEM58584.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228824606|gb|EEM70408.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228830871|gb|EEM76474.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228843280|gb|EEM88359.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229267685|gb|ACQ49322.1| exodeoxyribonuclease III [Bacillus anthracis str. A0248] Length = 252 Score = 183 bits (463), Expect = 3e-44, Method: Composition-based stats. Identities = 68/262 (25%), Positives = 123/262 (46%), Gaps = 14/262 (5%) Query: 4 VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + +WNVN +RA +++E+N DI CLQE K ++ + + Sbjct: 1 MKFISWNVNGLRAVIAKGGFLEYLEESNADIFCLQEIKLQEGQIDLNV-EGYYTYWNYAV 59 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G AI SK +P+ + L ++ D + R I F I LY P+ + Sbjct: 60 KKGYSGTAIFSKKEPLSVTYGLGIEEHDQEGRVITLEFE----DFYIITLYTPN-SKRGL 114 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + + ++ W F + + L+ ++ ++F GD N+ + D NP + F+ E R+ Sbjct: 115 ERLEYRMKWEDDFRAYIKR-LDEKKSVVFCGDLNVAHKEIDLKNPKSNRKNPGFSDEERE 173 Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 F + GF D R + YS+W Y + +KN G R+D+ ++S + +A+ Sbjct: 174 KFTCILEEGFIDTYRYLYPDQEGAYSWWSYRMGARAKNIGWRLDYFVVSERMKDQITAAK 233 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I+++ G SDH PV + ++ Sbjct: 234 INSEVMG----SDHCPVELHIN 251 >gi|317051838|ref|YP_004112954.1| exodeoxyribonuclease III [Desulfurispirillum indicum S5] gi|316946922|gb|ADU66398.1| exodeoxyribonuclease III [Desulfurispirillum indicum S5] Length = 272 Score = 183 bits (463), Expect = 3e-44, Method: Composition-based stats. Identities = 85/270 (31%), Positives = 128/270 (47%), Gaps = 10/270 (3%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64 T +N+N IRA H L A I++ PD+I LQETK D+ FP + ++ L Y E GQ Sbjct: 3 TFICFNINGIRAHFHQLEAIIQKYQPDVIGLQETKVSDELFPVDAIRELGYCSEFHGQPG 62 Query: 65 YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI-NTQTLRIGNLYLPHGNPITSTK 123 + GVA+LS+ QP + PGD DVQ RFI A + + + + + N Y P G + Sbjct: 63 HYGVALLSRAQPNSVRKSFPGDGPDVQRRFIGADYALSDGSRITVLNGYFPQGESRDHPQ 122 Query: 124 -YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176 + K + + Q + + L+ GD NI P D + CF Sbjct: 123 KFPAKEKFYADLTAYLQQCHQPAQQLLLMGDMNIAPTDSDVGIGEDNARRWLRSGKCCFL 182 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK--NKGIRIDHIMLSPEATS 234 E R +Q L + G DA R S++DY + + + +G+RIDH++++ Sbjct: 183 PEERLWYQSLTDWGLRDAHRLLFPDMQELSWFDYRSRGFEREPKRGLRIDHMLVTTPLEE 242 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 L ID + R KPSDH P+ V + + Sbjct: 243 KLLDGGIDYEIRALEKPSDHCPIWVKIRLS 272 >gi|27375729|ref|NP_767258.1| exodeoxyribonuclease III [Bradyrhizobium japonicum USDA 110] gi|27348867|dbj|BAC45883.1| exodeoxyribonuclease III [Bradyrhizobium japonicum USDA 110] Length = 271 Score = 183 bits (463), Expect = 3e-44, Method: Composition-based stats. Identities = 75/271 (27%), Positives = 122/271 (45%), Gaps = 11/271 (4%) Query: 4 VTV--ATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETC 60 + + TWN+NS+R RI +A ++K PD++CLQETK D FP + + L Y H+ Sbjct: 1 MRLSLTTWNINSVRLRIDLVAKFLKSARPDVLCLQETKCIDDAFPLKRFKRLGYEHVALN 60 Query: 61 GQKSYNGVAILSKYQPI-EIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 GQK Y+GVAI+S+ + + T + L + N Y+P G I Sbjct: 61 GQKGYHGVAIVSRIPFESKDIRTFCDKVDSRHISVSFGTQANIAKPLVLHNFYVPAGGDI 120 Query: 120 TST----KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 K+D K+ ++ ++ I GD N+ P +D ++ Sbjct: 121 PDPALNEKFDHKLRFLDEMTACEPLHPRGDDRHILVGDLNVAPHENDVWSHKQLLKVVSH 180 Query: 176 TL-EVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWS-KNKGIRIDHIMLSPEA 232 T E + L + D R +Y++W Y + W+ ++G R+DHI +S Sbjct: 181 TPVETEKLKAALAAGEWVDVARERIPMSEKVYTWWSYRSADWTVGDRGRRLDHIWVSRAL 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + +I R W +PSDH PV V+L++ Sbjct: 241 KDAVQDFKILRDARSWERPSDHVPVTVTLEV 271 >gi|295838281|ref|ZP_06825214.1| exodeoxyribonuclease III [Streptomyces sp. SPB74] gi|197698261|gb|EDY45194.1| exodeoxyribonuclease III [Streptomyces sp. SPB74] Length = 274 Score = 183 bits (463), Expect = 3e-44, Method: Composition-based stats. Identities = 57/270 (21%), Positives = 100/270 (37%), Gaps = 8/270 (2%) Query: 1 MSVVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 +SV+ V + NVN +RA W+ + D++CLQE + E P + + Sbjct: 6 LSVLIVTSVNVNGLRAAAKKGFTEWLAGTSADVLCLQEVRAEAHQLPEGVARPEGWFSLH 65 Query: 60 CG--QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 K GV++ ++ +P + T + D R++EA T + G Sbjct: 66 APAADKGRAGVSLYTRREPDRVRTGFGSAEFDGSGRYVEADLPGVTVA-SLYLPSGEVGT 124 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 KY ++ + ++ GD+NI D N +A F Sbjct: 125 ERQEQKYRFMDEFLAYLKELRGRAAAEGREVLVCGDWNIAHTEADLKNWRGNRKNAGFLP 184 Query: 178 EVRQSFQKLQN----MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 E R+ ++ + T YS+W Y ++ + G RID+ M S Sbjct: 185 EEREWLSRVLDPGDGGYVDVVRGQYPGTEGPYSWWSYRGRAFDNDTGWRIDYHMASAGLA 244 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 A ++ + SDH PV V+ ++ Sbjct: 245 ERAVKAEVERAATHAERWSDHAPVTVTYEM 274 >gi|239930740|ref|ZP_04687693.1| exodeoxyribonuclease [Streptomyces ghanaensis ATCC 14672] Length = 266 Score = 183 bits (463), Expect = 3e-44, Method: Composition-based stats. Identities = 54/267 (20%), Positives = 98/267 (36%), Gaps = 8/267 (2%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++TV + NVN +RA W+ + D +CLQE + E + P + + +H+ Sbjct: 1 MLTVTSVNVNGLRAAAKKGFVEWLAQTPADALCLQEVRAEPQQLPEQVREPEGWHVVHAP 60 Query: 62 Q--KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 K GV++ ++ +P + + D R++EA T + G Sbjct: 61 AAAKGRAGVSLYTRREPDRVQVGFGSTEFDGSGRYVEADLPGVTVA-SLYLPSGEVGTER 119 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K ++ + ++ GD+NI + D N ++ F E Sbjct: 120 QEEKVRFMGEFLAYLKELRERAAGEGREVVVCGDWNIAHEKADLKNWRGNTKNSGFLPEE 179 Query: 180 RQSF----QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 R+ + D YS+W Y ++ + G RID+ M +P Sbjct: 180 REWLSRVLTPTDGGYVDVVRKLHPDVDGPYSWWSYRGRAFDNDTGWRIDYQMATPGLAER 239 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262 A ++ + SDH PV V + Sbjct: 240 AVEAYVERAATHAERWSDHAPVTVVFE 266 >gi|325269387|ref|ZP_08136004.1| exodeoxyribonuclease III [Prevotella multiformis DSM 16608] gi|324988308|gb|EGC20274.1| exodeoxyribonuclease III [Prevotella multiformis DSM 16608] Length = 249 Score = 183 bits (463), Expect = 3e-44, Method: Composition-based stats. Identities = 65/260 (25%), Positives = 114/260 (43%), Gaps = 12/260 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + K + D CLQETK + + + Sbjct: 1 MKLISWNVNGLRACVGKDFEQQFKALDADFFCLQETKMQAGQLDIS-FPGYTSYWNYADK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K++P+++ + D+ D + R I + + + G Sbjct: 60 KGYSGTAIFTKHKPLDVTYGIGMDEHDHEGRVITLEMD-DFYLVTVYTPNSQDGLRRLDY 118 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + ++ + L+ ++P++ GD N+ + D NP +A FT E R+ Sbjct: 119 R-----MKWEKDFQNYLHWLDEKKPVVVCGDMNVAHEEIDIKNPKTNRRNAGFTDEEREK 173 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 +L + GF D R+ + YS+W Y + +N G RID+ ++S L A+I Sbjct: 174 MTQLLDSGFIDTFRSLYPEQVTYSWWSYRFRARERNTGWRIDYFLISERLRDRLEDAKIH 233 Query: 243 TKPRGWTKPSDHTPVIVSLD 262 T+ G SDH P+ V L Sbjct: 234 TEIMG----SDHCPIEVDLK 249 >gi|218532288|ref|YP_002423104.1| exodeoxyribonuclease III Xth [Methylobacterium chloromethanicum CM4] gi|218524591|gb|ACK85176.1| exodeoxyribonuclease III Xth [Methylobacterium chloromethanicum CM4] Length = 269 Score = 183 bits (463), Expect = 3e-44, Method: Composition-based stats. Identities = 74/267 (27%), Positives = 126/267 (47%), Gaps = 7/267 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62 +TV TWN+NS+R RI ++ +++E PD++CLQETK D FP + + Y +I GQ Sbjct: 3 LTVTTWNINSVRLRIESVLRFLREAQPDVLCLQETKCPDDLFPLKAFKGSGYENIVFAGQ 62 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLD-VQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 K YNGVAI+S++ + + D + + + + Y+P G + Sbjct: 63 KGYNGVAIISRFPLLTRDVMSFCERPDARHISAVLGPEAGPAAGIVLHDFYVPAGGDMPH 122 Query: 122 TKYDDKISWIKRFLRFASQR--LELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K + FL + P I GD N+ P HD ++ + T Sbjct: 123 RDLNPKFAHKLDFLSELRGWGGRRVSGPAILVGDLNVAPLEHDVWSHKQLLDVVSHTPVE 182 Query: 180 RQS--FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLL 236 ++ + + A T + +Y++W Y + +W NKG R+DH +SP+ + Sbjct: 183 TEALETLRGEAGWIDAARLLTPEPEKIYTWWSYRSPNWELANKGRRLDHTWVSPDLAGTV 242 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263 + + RGW +PSDH PV ++L++ Sbjct: 243 RRVAVFREARGWERPSDHVPVTLTLEL 269 >gi|242309877|ref|ZP_04809032.1| exodeoxyribonuclease LexA [Helicobacter pullorum MIT 98-5489] gi|239523878|gb|EEQ63744.1| exodeoxyribonuclease LexA [Helicobacter pullorum MIT 98-5489] Length = 256 Score = 183 bits (463), Expect = 3e-44, Method: Composition-based stats. Identities = 71/263 (26%), Positives = 118/263 (44%), Gaps = 13/263 (4%) Query: 2 SVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 +++ + +WNVN +RA + + + D+ C+QE+K + + F+ + + + Sbjct: 3 TIMKLISWNVNGLRACMNKGFMDFFNTIDADVFCIQESKMQKEQATFD-FPNYEEYWNSA 61 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GVAI SK +P+ + + D + R I A + + + Sbjct: 62 EKKGYSGVAIFSKKKPLSVAYDMGISHHDKEGRIITAEY---NDFFLVNVYTPNSKRELE 118 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 +Y + R + LE+ +P+I GD N+ + D NP +A FT E R Sbjct: 119 RLEYR---MEWEDDFRNFLKNLEVTKPVIVCGDLNVAHKEIDLKNPKTNRRNAGFTDEER 175 Query: 181 QSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + L + GFTD R H T YS+W Y + N G RID+ + S S L SA Sbjct: 176 EKMSVLLDSGFTDTFRYFHPTLEGAYSWWSYMGKARENNTGWRIDYFLCSKALDSKLKSA 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 I + G SDH PV + ++ Sbjct: 236 SIYPEIFG----SDHCPVGLEIN 254 >gi|257886665|ref|ZP_05666318.1| AP endonuclease [Enterococcus faecium 1,141,733] gi|257895240|ref|ZP_05674893.1| AP endonuclease [Enterococcus faecium Com12] gi|293377228|ref|ZP_06623433.1| exodeoxyribonuclease III [Enterococcus faecium PC4.1] gi|257822719|gb|EEV49651.1| AP endonuclease [Enterococcus faecium 1,141,733] gi|257831805|gb|EEV58226.1| AP endonuclease [Enterococcus faecium Com12] gi|292644089|gb|EFF62194.1| exodeoxyribonuclease III [Enterococcus faecium PC4.1] Length = 250 Score = 183 bits (463), Expect = 4e-44, Method: Composition-based stats. Identities = 70/261 (26%), Positives = 112/261 (42%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + N E + D CLQETK + + L + + Sbjct: 1 MKFISWNVNGLRAIVNKNFLEVFHELDADFFCLQETKLQAGQIDLD-LPGYYQYWNYAER 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K + + D D + R I ++ + Sbjct: 60 KGYSGTAIFAKEPALNATYGMGIDIHDTEGRLITLEYSDF-----FLVTCYTPNSQSELK 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + D ++ W + F + L+ ++P+I GD N+ Q D N + +A FT E R + Sbjct: 115 RLDYRLEWEEAFYNYLEN-LKKQKPVIVCGDLNVAHQTIDLKNWKTNQKNAGFTPEERAA 173 Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +L + GF D R + +YS+W+Y +S N G RID+ + S + L A+I Sbjct: 174 LSRLLDNGFIDTFRYFYPTQEGVYSWWNYRFNSRKNNAGWRIDYFLTSKDLAPRLADAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 T G SDH PV + L Sbjct: 234 HTDIMG----SDHCPVELDLK 250 >gi|229174398|ref|ZP_04301930.1| Exodeoxyribonuclease [Bacillus cereus MM3] gi|228608958|gb|EEK66248.1| Exodeoxyribonuclease [Bacillus cereus MM3] Length = 252 Score = 183 bits (463), Expect = 4e-44, Method: Composition-based stats. Identities = 67/262 (25%), Positives = 119/262 (45%), Gaps = 14/262 (5%) Query: 4 VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + +WNVN +RA +++E+N DI CLQE K +D + + Sbjct: 1 MKLISWNVNGLRAVIAKGGFLEYLEESNVDIFCLQEIKLQDGQIDLNP-EGYYTYWNYAV 59 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G AI +K +P+ + L ++ D + R I F + Sbjct: 60 KKGYSGTAIFTKKEPLSVTYGLGIEEHDQEGRVITLEFEDFYMI-----TLYTPNSKRGL 114 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + D ++ W F + Q L+ ++P++F GD N+ + D NP + F+ E R+ Sbjct: 115 ERLDYRMKWEDDFRAYIKQ-LDEKKPVVFCGDLNVAHKEIDLKNPKSNRKNPGFSDEERE 173 Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 F + GF D R + YS+W Y + +KN G R+D+ ++S + A+ Sbjct: 174 KFTCILEEGFIDTYRYLYPDQEGAYSWWSYRMGARAKNIGWRLDYFVVSERMKDKITEAK 233 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I+++ G SDH PV + ++ Sbjct: 234 INSEVMG----SDHCPVELHIN 251 >gi|163853428|ref|YP_001641471.1| exodeoxyribonuclease III Xth [Methylobacterium extorquens PA1] gi|254563357|ref|YP_003070452.1| exodeoxyribonuclease III [Methylobacterium extorquens DM4] gi|163665033|gb|ABY32400.1| exodeoxyribonuclease III Xth [Methylobacterium extorquens PA1] gi|254270635|emb|CAX26639.1| Exodeoxyribonuclease III (Exonuclease III) (EXO III) (AP endonuclease VI) [Methylobacterium extorquens DM4] Length = 269 Score = 183 bits (463), Expect = 4e-44, Method: Composition-based stats. Identities = 74/267 (27%), Positives = 126/267 (47%), Gaps = 7/267 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62 +TV TWN+NS+R RI ++ +++E PD++CLQETK D FP + + Y +I GQ Sbjct: 3 LTVTTWNINSVRLRIESVLRFLREAQPDVLCLQETKCPDDLFPLKAFKGSGYENIVFAGQ 62 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLD-VQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 K YNGVAI+S++ + + D + + + + Y+P G + Sbjct: 63 KGYNGVAIISRFPLLTRDVMSFCERPDARHISAVLGPEAGPAAGIVLHDFYVPAGGDMPH 122 Query: 122 TKYDDKISWIKRFLRFASQR--LELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K + FL + P I GD N+ P HD ++ + T Sbjct: 123 RDLNPKFAHKLDFLSELRVWGGRRVSGPAILVGDLNVAPLEHDVWSHKQLLDVVSHTPVE 182 Query: 180 RQS--FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLL 236 ++ + + A T + +Y++W Y + +W NKG R+DH +SP+ + Sbjct: 183 TEALETLRGEAGWIDAARLLTPEPEKIYTWWSYRSPNWELANKGRRLDHTWVSPDLAGTV 242 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263 + + RGW +PSDH PV ++L++ Sbjct: 243 RRVAVFREARGWERPSDHVPVTLTLEL 269 >gi|228940815|ref|ZP_04103375.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228973735|ref|ZP_04134313.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228980291|ref|ZP_04140602.1| Exodeoxyribonuclease [Bacillus thuringiensis Bt407] gi|228779396|gb|EEM27652.1| Exodeoxyribonuclease [Bacillus thuringiensis Bt407] gi|228785981|gb|EEM33982.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228818829|gb|EEM64894.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326941450|gb|AEA17346.1| exodeoxyribonuclease III [Bacillus thuringiensis serovar chinensis CT-43] Length = 252 Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats. Identities = 67/262 (25%), Positives = 120/262 (45%), Gaps = 14/262 (5%) Query: 4 VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + +WNVN +RA +++E++ DI CLQE K ++ L+ + Sbjct: 1 MKLISWNVNGLRAVIAKGGFLEYLEESSADIFCLQEIKLQEGQIDLN-LEGYYTYWNYAV 59 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G AI SK +P+ + L ++ D + R I F + Sbjct: 60 KKGYSGTAIFSKKEPLSVTYGLGIEEHDQEGRLITLEFEDFYMI-----TLYTPNSKRGL 114 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + D ++ W F + + L+ ++P+IF GD N+ + D NP + F+ E R+ Sbjct: 115 ERLDYRMKWEDDFRSYIKR-LDEKKPVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEERE 173 Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 F + GF D R + YS+W Y + +KN G R+D+ ++S + A+ Sbjct: 174 KFTCILEEGFVDTYRYLYPNQEGAYSWWSYRMGARAKNIGWRLDYFVVSERMKDQITEAK 233 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I+++ G SDH PV + ++ Sbjct: 234 INSEVMG----SDHCPVELHIN 251 >gi|190572480|ref|YP_001970325.1| putative endonuclease/exonuclease/phosphatase family protein [Stenotrophomonas maltophilia K279a] gi|190010402|emb|CAQ44010.1| putative endonuclease/exonuclease/phosphatase family protein [Stenotrophomonas maltophilia K279a] Length = 266 Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats. Identities = 65/275 (23%), Positives = 111/275 (40%), Gaps = 24/275 (8%) Query: 4 VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + ++N N IR A W + + D++C+QETK ++ + +H Sbjct: 1 MRIISFNANGIRSAATKGFLDWFRAQDADVLCIQETKAQEDQLSDPMFRPDGHHCFYRDA 60 Query: 62 --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GVAI SK +P +++T L D + R+IEA + L + + Y+P G+ Sbjct: 61 ITKKGYSGVAIYSKREPDQVITSLGWAPFDDEGRYIEARYG----NLSVVSFYIPSGS-S 115 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K ++ + + GD+NI+ D N + ++ E Sbjct: 116 GDLRQGFKFEVMEWLRPILEEWARSGRDYVLCGDWNIVRSALDIKNWKSNQKNSGCLPEE 175 Query: 180 RQSFQKLQNMG-----------FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 R L + DA R + T Y++W + + N G RID+ + Sbjct: 176 RDWLNALCADHGQATDVTAGRGWADAYRLLNPTGEDYTWWSNRGAARANNVGWRIDYQFI 235 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +P L S I R SDH P V D+ Sbjct: 236 TPGLRDRLRSCSIYRDER----FSDHAPFTVDYDL 266 >gi|329895423|ref|ZP_08271004.1| Exodeoxyribonuclease III [gamma proteobacterium IMCC3088] gi|328922306|gb|EGG29652.1| Exodeoxyribonuclease III [gamma proteobacterium IMCC3088] Length = 256 Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats. Identities = 71/263 (26%), Positives = 113/263 (42%), Gaps = 15/263 (5%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPF---ETLQSLNYHIET 59 + + +WNVN IRA + + PD++CLQETK +D E + + Sbjct: 1 MRLVSWNVNGIRAVTKKDFFESFERMAPDVLCLQETKAQDDQVLEALTELDPAYKVFSNS 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G AI+++ +PI + + + D + R + A F + G+ + Sbjct: 61 AEKKGYSGTAIITRVEPISVTADMGMPEHDTEGRVLCAEFETFY---LVTVYTPNSGSEL 117 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND-ACFTLE 178 Y + LE +P++ GD N+ Q D P N A + Sbjct: 118 KRLDYRQSWDKDFADY---LKTLEQTKPVVVCGDLNVAHQDIDLARPKQNYNKSAGYMQA 174 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 F +L ++GF D R + YS+W Y A + KN G RID+ +++PE TS L Sbjct: 175 EIDGFDRLVDLGFVDTYRHFNPNTAKYSWWSYRAGAREKNIGWRIDYFLVTPELTSSLTG 234 Query: 239 ARIDTKPRGWTKPSDHTPVIVSL 261 A I G SDH PV + + Sbjct: 235 AEIYNDVYG----SDHCPVGIDI 253 >gi|311070625|ref|YP_003975548.1| exodeoxyribonuclease III [Bacillus atrophaeus 1942] gi|310871142|gb|ADP34617.1| exodeoxyribonuclease III [Bacillus atrophaeus 1942] Length = 252 Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats. Identities = 69/263 (26%), Positives = 123/263 (46%), Gaps = 14/263 (5%) Query: 4 VTVATWNVNSIRARIH--NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + +WNVN +RA + N ++++E N DI CLQE K +D E + + + Sbjct: 1 MKLMSWNVNGLRALLTKMNFNSYLEEENVDIFCLQEIKLQDGQIKLEP-EGYHVYWNYAE 59 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G AI +K +P+ + L + D + R I F + + G Sbjct: 60 KKGYSGTAIFTKKEPLAVTYGLGIKEHDQEGRLITLEFENM-YVITVYTPNAKRGLERID 118 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + D + + L++++P++ GD N+ Q D NP +A F+ + R+ Sbjct: 119 YRMD-----WEDAFLSYIKALDVKKPVVLCGDLNVAHQEIDLKNPKANRKNAGFSDQERE 173 Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 F ++ GF D R H YS+W Y ++ +KN G R+D+ ++S + A+ Sbjct: 174 RFSQMLEEGFIDTFRYLHPDQEGAYSWWSYRMNARAKNVGWRLDYFIVSERLKKQIRGAK 233 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263 I + G SDH PV +++D+ Sbjct: 234 ICNEVMG----SDHCPVELTIDL 252 >gi|291528729|emb|CBK94315.1| exodeoxyribonuclease III [Eubacterium rectale M104/1] Length = 251 Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats. Identities = 66/261 (25%), Positives = 111/261 (42%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + + + D C+QE+K + + L + + + Sbjct: 1 MKFISWNVNGLRACVQKGFLDFFNSIDADFFCIQESKLQAGQIDLD-LPGYHQYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +P+ + + ++ D + R I + + Y P+ Sbjct: 60 KGYSGTAIFAKNEPLSVSYGIGIEEHDKEGRVITLEYD----NFYLVTCYTPNSQNELKR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 ++ W F + L+ ++P++ GD N+ D NP +A F+ E R Sbjct: 116 -LPYRMQWEDDFREYLKT-LDAKKPVVLCGDLNVAHNEIDLKNPKTNRKNAGFSDEERAK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +L GFTD R + +YS+W Y + KN G RID+ + S L A I Sbjct: 174 MTELLGSGFTDTFRYFYPDAEGIYSWWSYRFKAREKNAGWRIDYFITSKRINDKLQKAAI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 T G SDH PV V ++ Sbjct: 234 HTDVLG----SDHCPVEVDIE 250 >gi|229197850|ref|ZP_04324566.1| Exodeoxyribonuclease [Bacillus cereus m1293] gi|228585568|gb|EEK43670.1| Exodeoxyribonuclease [Bacillus cereus m1293] Length = 252 Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats. Identities = 71/262 (27%), Positives = 124/262 (47%), Gaps = 14/262 (5%) Query: 4 VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + +WNVN +RA +++E+N DI CLQE K ++ + + Sbjct: 1 MKFISWNVNGLRAVIAKGGFLEYLEESNADIFCLQEIKLQEGQIDLNV-EGYYTYWNYAV 59 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G AI SK +P+ + L ++ D + R I F I LY P+ + Sbjct: 60 KKGYSGTAIFSKEEPLSVTYGLGIEEHDQEGRVITLEFE----DFYIITLYTPN-SKRGL 114 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + D ++ W F + + L+ ++P+IF GD N+ + D NP + F+ E R+ Sbjct: 115 ERLDYRMKWEDDFRVYIKR-LDEKKPVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEERE 173 Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 F + GF D R + YS+W Y + +KN G R+D+ ++S + +A+ Sbjct: 174 KFTCILEEGFIDTYRYLYPDQEGAYSWWSYRMGARAKNIGWRLDYFVVSERMKDQITAAK 233 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I+++ G SDH PV + ++ Sbjct: 234 INSEVMG----SDHCPVELHIN 251 >gi|310659330|ref|YP_003937051.1| exodeoxyribonuclease III [Clostridium sticklandii DSM 519] gi|308826108|emb|CBH22146.1| exodeoxyribonuclease III [Clostridium sticklandii] Length = 250 Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats. Identities = 67/260 (25%), Positives = 115/260 (44%), Gaps = 13/260 (5%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN IRA + + E DI C+QETK ++ L + + Sbjct: 1 MKLISWNVNGIRACVKKGFLEYFDEVEADIFCIQETKLQEGQIDL-MLNDYEQYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G A+ +K +PI + + + D + R I + + N+Y P+ P + Sbjct: 60 KGYSGTAVFTKIKPISVAYGIDIEHHDTEGRVITLEYD----NFYLVNVYTPNAQPKLAR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + R L+ ++P+I GD N+ D NP + F+ E R Sbjct: 116 L--EYRMQWEDDFRRYLNDLDEKKPVIVCGDLNVAHNEIDLKNPKSNRKNPGFSDEERGK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F L + GF D+ R + +Y++W Y ++ N G RID+ +S + + L +A I Sbjct: 174 FTNLLDSGFIDSFRFFYPDATEMYTWWSYRFNARENNAGWRIDYFCVSNKLKNELKNAEI 233 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 G SDH PV++ + Sbjct: 234 HMDILG----SDHCPVVLEI 249 >gi|150402181|ref|YP_001329475.1| exodeoxyribonuclease III Xth [Methanococcus maripaludis C7] gi|150033211|gb|ABR65324.1| exodeoxyribonuclease III Xth [Methanococcus maripaludis C7] Length = 249 Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats. Identities = 73/260 (28%), Positives = 118/260 (45%), Gaps = 12/260 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN IRA + +++ +PDI+C+QETK + L + + Sbjct: 1 MKMISWNVNGIRACLKNGFMDFLERESPDIMCIQETKVQSGQVQL-GLDGYFQYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +P ++ + + D + R + F + T Sbjct: 60 KGYSGTAIFTKIKPNNVILGIKNTEHDGEGRVLTLEFDK-----YYLINVYTPNSQRGLT 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + + W + FL + LE E+P+IF GD N+ + D NP +A FT E R Sbjct: 115 RLEYRQKWDQDFLNYIKT-LENEKPVIFCGDLNVAHKEIDLKNPKNNVKNAGFTPEERIG 173 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F + + GF D R + YS+W Y ++ SKN G RID+ +S L A I Sbjct: 174 FDNIVDSGFIDTFREFNKEPDNYSWWSYRFNARSKNIGWRIDYFCISKILRDNLKDAFIM 233 Query: 243 TKPRGWTKPSDHTPVIVSLD 262 ++ G SDH PV + + Sbjct: 234 SEVMG----SDHCPVGIIFE 249 >gi|257883889|ref|ZP_05663542.1| AP endonuclease [Enterococcus faecium 1,231,501] gi|257819727|gb|EEV46875.1| AP endonuclease [Enterococcus faecium 1,231,501] Length = 250 Score = 182 bits (462), Expect = 4e-44, Method: Composition-based stats. Identities = 70/261 (26%), Positives = 112/261 (42%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + N E + D CLQETK + + L + + Sbjct: 1 MKFISWNVNGLRAIVNKNFLEVFHELDADFFCLQETKLQAGQIDLD-LPGYYQYWNYAER 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K + + D D + R I ++ + Sbjct: 60 KGYSGTAIFAKKPALNATYGMGIDIHDTEGRLITLEYSDF-----FLVTCYTPNSQSELK 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + D ++ W + F + L+ ++P+I GD N+ Q D N + +A FT E R + Sbjct: 115 RLDYRLEWEEAFYNYLEN-LKKQKPVIICGDLNVAHQTIDLKNWKTNQKNAGFTPEERAA 173 Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +L + GF D R + +YS+W+Y +S N G RID+ + S + L A+I Sbjct: 174 LSRLLDNGFVDTFRYFYPTQEGVYSWWNYRFNSRKNNAGWRIDYFLASKDLEPRLADAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 T G SDH PV + L Sbjct: 234 HTDIMG----SDHCPVELDLK 250 >gi|228959948|ref|ZP_04121613.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar pakistani str. T13001] gi|228799691|gb|EEM46643.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar pakistani str. T13001] Length = 252 Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats. Identities = 67/262 (25%), Positives = 120/262 (45%), Gaps = 14/262 (5%) Query: 4 VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + +WNVN +RA +++E++ DI CLQE K ++ L+ + Sbjct: 1 MKLISWNVNGLRAVIAKGGFLEYLEESSADIFCLQEIKLQEGQIDLN-LEGYYTYWNYAV 59 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G AI SK +P+ + L ++ D + R I F + Sbjct: 60 KKGYSGTAIFSKKEPLSVTYGLGIEEHDQEGRLITLEFEDFYMI-----TLYTPNSKRGL 114 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + D ++ W F + + L+ ++P+IF GD N+ + D NP + F+ E R+ Sbjct: 115 ERLDYRMKWEDDFRSYIKR-LDEKKPVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEERE 173 Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 F + GF D R + YS+W Y + +KN G R+D+ ++S + A+ Sbjct: 174 KFSCILEEGFIDTYRYLYPNQEGAYSWWSYRMGARAKNIGWRLDYFVVSERMKDQITEAK 233 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I+++ G SDH PV + ++ Sbjct: 234 INSEVMG----SDHCPVELHIN 251 >gi|159906029|ref|YP_001549691.1| exodeoxyribonuclease III Xth [Methanococcus maripaludis C6] gi|159887522|gb|ABX02459.1| exodeoxyribonuclease III Xth [Methanococcus maripaludis C6] Length = 249 Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats. Identities = 72/259 (27%), Positives = 119/259 (45%), Gaps = 12/259 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN IRA + +++ +PDI+C+QETK + L + + Sbjct: 1 MKMISWNVNGIRACLKNGFMNFLERESPDIMCIQETKVQSGQVQL-GLDGYFQYWNYAER 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G A+ +K +P E++ + ++ D + R I F + T Sbjct: 60 KGYSGTAVFTKIKPNEVIYGIGNNEHDGEGRVITLKFDE-----YYLVNVYTPNSQRGLT 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + + W + FL + LE ++P+IF GD N+ + D NP +A FT E R+ Sbjct: 115 RLEYRQKWDQDFLNYVKT-LENKKPVIFCGDLNVAHKEVDLKNPKTNVKNAGFTPEERKG 173 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F + N GF D R + YS+W Y ++ ++N G RID+ +S L A I Sbjct: 174 FDNIVNSGFLDTFREFNKEPDNYSWWSYRFNARARNIGWRIDYFCISESLRGNLKDAFIM 233 Query: 243 TKPRGWTKPSDHTPVIVSL 261 + G SDH PV + Sbjct: 234 PEIMG----SDHCPVGIIF 248 >gi|116625780|ref|YP_827936.1| exodeoxyribonuclease III [Candidatus Solibacter usitatus Ellin6076] gi|116228942|gb|ABJ87651.1| Exodeoxyribonuclease III [Candidatus Solibacter usitatus Ellin6076] Length = 258 Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats. Identities = 85/259 (32%), Positives = 133/259 (51%), Gaps = 3/259 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+N+N+I R++NL AW+ PD++CLQE K E + FP L+ L Y G++ Sbjct: 1 MKIATFNINNINKRLNNLTAWLSRAQPDVVCLQELKAEQRAFPASALRDLGYDGFWLGER 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 S+NGVAI ++ + I +LYLP+GNP K Sbjct: 61 SWNGVAIFAR---ECTPVLTRSSLPGNPKDSQARYIEAAVNGVLIASLYLPNGNPQPGPK 117 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 +D K++W +R + + ++ P++ AGDYN++P D Y + +A + RQ++ Sbjct: 118 FDYKLAWFQRLIEHGQELMKAGVPVVLAGDYNVVPTAQDIYPTRSLDKNALIQPQSRQAY 177 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +L G+TDA+R L++FWDY W KG+R+DH +LSP + L +D Sbjct: 178 ARLLAQGWTDALRTLQPEGPLWTFWDYERGRWPLGKGMRLDHFLLSPTVSDRLVDGGVDR 237 Query: 244 KPRGWTKPSDHTPVIVSLD 262 RG SDH P + LD Sbjct: 238 WVRGEENASDHAPAWIVLD 256 >gi|92115724|ref|YP_575453.1| exodeoxyribonuclease III (xth) [Nitrobacter hamburgensis X14] gi|91798618|gb|ABE60993.1| exodeoxyribonuclease III (xth) [Nitrobacter hamburgensis X14] Length = 293 Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats. Identities = 74/269 (27%), Positives = 115/269 (42%), Gaps = 9/269 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62 +T+ TWNVNS+R RI +A ++K PD++CLQETK D FP + + L Y H+ GQ Sbjct: 25 ITLTTWNVNSVRLRIDLVAKFLKAQRPDVLCLQETKCPDDAFPLKRFRRLGYEHVALNGQ 84 Query: 63 KSYNGVAILSKYQPIEIV-THLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT- 120 K Y+GVA++SK L + N Y+P G I Sbjct: 85 KGYHGVAVVSKLPFDASNIRTFCDKIDSRHVGVTLGGEAGLAAPLVLHNFYVPAGGDIPD 144 Query: 121 ---STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + K+ K+ ++ + + GD N+ P HD ++ T Sbjct: 145 PALNPKFAHKLQFLDEMKACTPLHPRDGDRHVLVGDLNVAPHEHDVWSHKQLLKIVSHTP 204 Query: 178 EVRQS--FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATS 234 + + A + +Y++W Y A W + N+G R+DHI +S Sbjct: 205 VECEKLLGLQSHGNWVDIARARIPMSEKVYTWWSYRAADWVAANRGRRLDHIWVSEALRG 264 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + RI RGW +PSDH PV +++ Sbjct: 265 GIRDFRITRAARGWERPSDHVPVTAVIEV 293 >gi|329120913|ref|ZP_08249545.1| exodeoxyribonuclease III [Dialister micraerophilus DSM 19965] gi|327471372|gb|EGF16823.1| exodeoxyribonuclease III [Dialister micraerophilus DSM 19965] Length = 254 Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats. Identities = 72/264 (27%), Positives = 122/264 (46%), Gaps = 13/264 (4%) Query: 1 MSVVTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 M+ + +WNVN +RA I K N D CLQETK + + + + + Sbjct: 1 MNNLKYISWNVNGLRACIKKGFLDSFKNLNADCFCLQETKLQPHQIELD-IPGYYQYWNS 59 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G A+ +K +PI + + ++ D + R I A F + + + Sbjct: 60 AIKKGYSGTALFTKIKPISVSYGMNIEEHDQEGRLITAEFKNHFLVV-----CYTPNSQR 114 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + + ++ W F + + L +P+I GD N+ + D NP +A FT + Sbjct: 115 QLARLEYRMKWENDFKNYLLK-LTESKPVILCGDLNVAHKEIDLANPSSNHKNAGFTDDE 173 Query: 180 RQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R+ F L GFTD R + YS+W Y+A S +N G RID+ ++S + + + Sbjct: 174 RKKFSTLLENGFTDTFRYLYPDKKDAYSWWSYFAKSRERNIGWRIDYFLVSDKLKNKIKD 233 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 A+I + +G SDH PV ++ D Sbjct: 234 AKIHPEIQG----SDHCPVELTFD 253 >gi|292670448|ref|ZP_06603874.1| exodeoxyribonuclease III [Selenomonas noxia ATCC 43541] gi|292647858|gb|EFF65830.1| exodeoxyribonuclease III [Selenomonas noxia ATCC 43541] Length = 250 Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats. Identities = 66/261 (25%), Positives = 108/261 (41%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + KE N D+ CLQETK ++ + L + + + Sbjct: 1 MRFVSWNVNGLRAALKKGFMESFKELNADVFCLQETKMQEGQAILD-LPGYEQYFYSAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI ++ +P+ + + ++ D + R I + Sbjct: 60 KGYSGTAIFTRVKPLSVSYGIGIEEHDNEGRVITMELPDVYLVTVYTPNAKRALERLDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + R L ++P++ GD N+ D NP +A FT E R Sbjct: 120 M------AWEDSFRAFLLDLRAKKPVVVCGDLNVAHTEIDLKNPKSNRRNAGFTDEERGK 173 Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L GF D RA + Y++W Y + N G RID+ ++S E + +A I Sbjct: 174 FGELLAAGFVDTFRALYPDRTGAYTWWSYLRHARETNAGWRIDYFLVSAELRDRIAAAEI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 + G SDH PV ++L Sbjct: 234 HSDIFG----SDHCPVSLTLK 250 >gi|256419936|ref|YP_003120589.1| exodeoxyribonuclease III Xth [Chitinophaga pinensis DSM 2588] gi|256034844|gb|ACU58388.1| exodeoxyribonuclease III Xth [Chitinophaga pinensis DSM 2588] Length = 254 Score = 182 bits (461), Expect = 5e-44, Method: Composition-based stats. Identities = 76/262 (29%), Positives = 120/262 (45%), Gaps = 12/262 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60 + + ++NVN +R+ + W+K + DIICLQE K N ++ + L + + Sbjct: 1 MRIVSYNVNGLRSAMNKGFTEWLKTDPADIICLQEIKAHKDNVDYKQFEELGFEHYWYPA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GVA+L+K P + D + R I F + + N Y+P G Sbjct: 61 QKKGYSGVAVLTKITPDHVQYGNGFMQSDAEGRVIRLDFG----DITLINTYMPSG-TSG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K W++ F + Q LI GDYNI +P D ++P+ + + F E R Sbjct: 116 DERQTYKYQWLEEFYGYVDQLKATRPNLIICGDYNICHKPIDIHDPVGNKKSSGFLPEER 175 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 KL + GF D R H H YS+W ++ + NKG RID+I ++ L A Sbjct: 176 AWLDKLFSNGFVDTFRHYHPEPHQYSWWSVRTNARANNKGWRIDYISVTAPLQPKLKDAL 235 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I K SDH P+ + L+ Sbjct: 236 IWPDV----KHSDHCPIYLQLE 253 >gi|255323252|ref|ZP_05364387.1| exodeoxyribonuclease III [Campylobacter showae RM3277] gi|255299775|gb|EET79057.1| exodeoxyribonuclease III [Campylobacter showae RM3277] Length = 256 Score = 182 bits (461), Expect = 5e-44, Method: Composition-based stats. Identities = 65/262 (24%), Positives = 113/262 (43%), Gaps = 12/262 (4%) Query: 4 VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + AW+++ PD + QE K + + P E + L ++ + Sbjct: 1 MKLISWNVNGLRAVAAKDGFAWLEQQKPDFLGFQEIKVRESDVPAEIYK-LGFNEISVNS 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 + G + + T D + R +E F + + N+Y P+G Sbjct: 60 AARAGYSGVMSLAKFSSATQKAAFFDDDEGRVLEHRFG----NVVLFNIYFPNGQ-KDDA 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + K+ + +FL + + ++ + +IF GD N + D NP + F R Sbjct: 115 RLAYKMDFYAKFLAYIQELVKQGKDVIFCGDVNTAHREIDLKNPKANAKTSGFLPIERAW 174 Query: 183 FQKLQNMGFTDAIRA-THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 ++ GF D R D YS+W Y ++ +KN G RID+ +S L A I Sbjct: 175 LDEVVACGFIDTFRHVRGDAADAYSWWSYRFNARAKNVGWRIDYFFISSSLKDRLKDAFI 234 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 + G SDH PV + +D+ Sbjct: 235 LSDITG----SDHCPVGIEIDL 252 >gi|260592674|ref|ZP_05858132.1| exodeoxyribonuclease III [Prevotella veroralis F0319] gi|260535444|gb|EEX18061.1| exodeoxyribonuclease III [Prevotella veroralis F0319] Length = 249 Score = 182 bits (461), Expect = 5e-44, Method: Composition-based stats. Identities = 69/260 (26%), Positives = 113/260 (43%), Gaps = 12/260 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + K+ N D CLQETK + + + Sbjct: 1 MKLISWNVNGLRACVGKDFEQQFKDFNADFFCLQETKMQAGQLDLS-FPGYESYWNYADK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI ++++P+ + + D+ D + R I + +Y P+ Sbjct: 60 KGYSGTAIFTRHKPLSVTYGIDIDEHDHEGRVITLEMD----DFYLVTVYTPNSQDELRR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + + +L+ +P+I GD N+ Q D NP +A FT E RQ Sbjct: 116 L--EYRMKWEDDFQSYLHKLDEIKPVIVCGDMNVAHQEIDLKNPKTNRRNAGFTDEERQK 173 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 +L + GF D R + YS+W Y + KN G RID+ ++S L A+I Sbjct: 174 MTQLLSNGFIDTFRTLYPEQVTYSWWSYRFRAREKNTGWRIDYFLISERLRDRLVDAKIH 233 Query: 243 TKPRGWTKPSDHTPVIVSLD 262 T+ G SDH P+ + L Sbjct: 234 TEIMG----SDHCPIEIDLK 249 >gi|227552171|ref|ZP_03982220.1| exodeoxyribonuclease III [Enterococcus faecium TX1330] gi|257892875|ref|ZP_05672528.1| exodeoxyribonuclease [Enterococcus faecium 1,231,408] gi|227178703|gb|EEI59675.1| exodeoxyribonuclease III [Enterococcus faecium TX1330] gi|257829254|gb|EEV55861.1| exodeoxyribonuclease [Enterococcus faecium 1,231,408] Length = 269 Score = 182 bits (461), Expect = 5e-44, Method: Composition-based stats. Identities = 70/262 (26%), Positives = 113/262 (43%), Gaps = 13/262 (4%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ +WNVN +RA + N E + D CLQETK + + L + Sbjct: 19 LLKFISWNVNGLRAIVNKNFLEVFHELDADFFCLQETKLQAGQIDLD-LPGYYQYWNYAE 77 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G AI +K + + D D + R I ++ + Sbjct: 78 RKGYSGTAIFAKEPALNATYGMGIDIHDTEGRLITLEYSDF-----FLVTCYTPNSQSEL 132 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + D ++ W + F + L+ ++P+I GD N+ Q D N + +A FT E R Sbjct: 133 KRLDYRLEWEEAFYNYLEN-LKKQKPVIVCGDLNVAHQTIDLKNWKTNQKNAGFTPEERA 191 Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + +L + GF D R + +YS+W+Y +S N G RID+ + S + L A+ Sbjct: 192 ALSRLLDNGFIDTFRYFYPTQEGVYSWWNYRFNSRKNNAGWRIDYFLTSKDLAPRLADAK 251 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I T G SDH PV + L Sbjct: 252 IHTDIMG----SDHCPVELDLK 269 >gi|160915303|ref|ZP_02077516.1| hypothetical protein EUBDOL_01312 [Eubacterium dolichum DSM 3991] gi|158433102|gb|EDP11391.1| hypothetical protein EUBDOL_01312 [Eubacterium dolichum DSM 3991] Length = 252 Score = 182 bits (461), Expect = 5e-44, Method: Composition-based stats. Identities = 71/261 (27%), Positives = 115/261 (44%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN IRA + + + + DI C+QETK + ET ++ + + Sbjct: 1 MKLVSWNVNGIRACMKKGFMDFFQAIDADIFCIQETKMQPGQLEIET-DGYVQYMNSADK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+GV + SK +P+ + L D+ D + R I + + Sbjct: 60 KGYSGVMVFSKKEPLSVSYGLGIDEHDHEGRVITCEYDTFYLVCVYTPNSKDGLLRLDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + R QRL+ + ++ GD N+ Q D NP +A FT E R+ Sbjct: 120 MQ------WEDAFRAYLQRLKESKSVVVCGDLNVAHQEIDLKNPKTNRRNAGFTDEEREK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 L + GF D+ R + ++YS+W Y + KN G RID+ ++S +A + A+I Sbjct: 174 MTTLLSSGFVDSYRYLYPDKENVYSWWSYRFSAREKNAGWRIDYFLVSEDAKERIEEAQI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 T G SDH PV +S Sbjct: 234 HTDIYG----SDHCPVSLSFK 250 >gi|257460806|ref|ZP_05625907.1| exodeoxyribonuclease III [Campylobacter gracilis RM3268] gi|257442137|gb|EEV17279.1| exodeoxyribonuclease III [Campylobacter gracilis RM3268] Length = 252 Score = 182 bits (461), Expect = 5e-44, Method: Composition-based stats. Identities = 65/262 (24%), Positives = 104/262 (39%), Gaps = 12/262 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + AW+ E NPD + LQE K +K+ P + L + + Sbjct: 1 MKLISWNVNGLRAVLGKDGFAWLAEQNPDFLGLQEIKVSEKDAPKGLYE-LGF---SQID 56 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 + A S + L + + Sbjct: 57 LNSAARAGYSGVASLAKFKSETSKALFFPDDEGRVLQHRFGDVVLFNIYFPN--GQKDEA 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + K+ + +FL +A E +IF GD N + D NP + F R Sbjct: 115 RLAYKMEFYAKFLAYARSLAEQGLGVIFCGDVNTAHREIDLANPKANSKTSGFLPIERAW 174 Query: 183 FQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +++ GF D RA H + YS+W Y ++ +KN G RID+ +S S L A I Sbjct: 175 LDEVEAAGFVDTFRAVHGELRDAYSWWSYRFNARAKNVGWRIDYFFISANLRSQLKDAFI 234 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 + G SDH PV + ++I Sbjct: 235 LSDVMG----SDHCPVGIEIEI 252 >gi|86750015|ref|YP_486511.1| exodeoxyribonuclease III [Rhodopseudomonas palustris HaA2] gi|86573043|gb|ABD07600.1| exodeoxyribonuclease III [Rhodopseudomonas palustris HaA2] Length = 284 Score = 182 bits (461), Expect = 5e-44, Method: Composition-based stats. Identities = 90/259 (34%), Positives = 136/259 (52%), Gaps = 2/259 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+NVN++ R+ L W+K PDI+CLQE K +FP L Y GQK Sbjct: 28 LKIATFNVNNVNKRLPVLLGWLKAAKPDIVCLQELKAAQDDFPEAALLKAGYSAAWVGQK 87 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 ++NGVAIL++ + +VT + + +G LY P+GNP K Sbjct: 88 TWNGVAILARKRAEIVVTRRALPGDAKDLQSRYLEAAVAGMI--VGCLYAPNGNPQPGPK 145 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K++W+KR R A++ L+ P++ AGD+N++P P D Y W+ DA E R F Sbjct: 146 FQYKLAWMKRLNRHAAKLLKSGVPVVLAGDFNVVPTPADIYPTRSWDKDALLQPEPRALF 205 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 L G+TDA+RA H Y+FW Y+ + + ++ G+RIDH++L P + L +D Sbjct: 206 AALLKQGWTDALRALHPEQAPYTFWTYWRNRFERDHGLRIDHLLLDPASAQRLARGGVDR 265 Query: 244 KPRGWTKPSDHTPVIVSLD 262 RG SDH P + L Sbjct: 266 AIRGAPDASDHAPAWIVLK 284 >gi|294629849|ref|ZP_06708409.1| exodeoxyribonuclease III [Streptomyces sp. e14] gi|292833182|gb|EFF91531.1| exodeoxyribonuclease III [Streptomyces sp. e14] Length = 267 Score = 182 bits (461), Expect = 5e-44, Method: Composition-based stats. Identities = 54/268 (20%), Positives = 99/268 (36%), Gaps = 8/268 (2%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++TV + NVN +RA W+ D++CLQE + E + P + +H+ Sbjct: 1 MLTVTSVNVNGLRAAAKKGFVEWLARTGADVLCLQEVRAEPQQLPEQVRAPEGWHVTHAP 60 Query: 62 Q--KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 K GV++ ++ +P + + D R++EA T + G Sbjct: 61 AAAKGRAGVSLYTRREPDRVRVGFGSTEFDGSGRYVEADLPGVTVA-SLYLPSGEVGTER 119 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K ++ + ++ GD+NI Q D N ++ F E Sbjct: 120 QDEKVRFMGEFLAYLKELRERAAADGREVLVCGDWNIAHQRADLKNWRGNLKNSGFLPEE 179 Query: 180 RQSFQKL----QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 R+ ++ D YS+W Y ++ + G RID+ + +P + Sbjct: 180 REWLTQVLTPEAGGYVDVVRALHPDVEGPYSWWSYRGRAFDNDTGWRIDYHVSTPGLAAK 239 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 ++ + SDH PV V D+ Sbjct: 240 AVKGFVERAATHAERWSDHAPVTVVYDL 267 >gi|258512235|ref|YP_003185669.1| exodeoxyribonuclease III Xth [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478961|gb|ACV59280.1| exodeoxyribonuclease III Xth [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 252 Score = 182 bits (461), Expect = 5e-44, Method: Composition-based stats. Identities = 60/263 (22%), Positives = 108/263 (41%), Gaps = 14/263 (5%) Query: 4 VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + +WNVN +RA ++ + + + D+ C+QETK + ++ Sbjct: 1 MRFVSWNVNGLRACVNKGAFLPYFESADADVFCIQETKLQAGQIELPIGEAYQQFWNYAE 60 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G A+ ++ P+++ + + T+ N Sbjct: 61 RKGYSGTAVFTRITPLDVRYGFGDGNDPEGRIITLEFPSFYVVTVYTPNA------KRDL 114 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 ++ ++ W F + L+ E+P+I GD N+ + D N ++ FT E R Sbjct: 115 SRLPYRLEWEDAFCAY-LCALDREKPVIACGDLNVAHEEIDIKNAKSNRGNSGFTDEERA 173 Query: 182 SFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 +L GF D RA H Y++W +N G RID+ ++S + AR Sbjct: 174 KMTELLAAGFVDTFRALHPNVTDKYTWWSNMPGVRERNIGWRIDYFLVSERLRDRILDAR 233 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263 ID G SDH PV++ +D+ Sbjct: 234 IDDHVLG----SDHCPVVLEVDL 252 >gi|225016166|ref|ZP_03705370.1| hypothetical protein CLOSTMETH_00081 [Clostridium methylpentosum DSM 5476] gi|224951039|gb|EEG32248.1| hypothetical protein CLOSTMETH_00081 [Clostridium methylpentosum DSM 5476] Length = 253 Score = 182 bits (461), Expect = 6e-44, Method: Composition-based stats. Identities = 60/258 (23%), Positives = 111/258 (43%), Gaps = 13/258 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + +E + D+ C+QETK + L+ + + Sbjct: 1 MKLISWNVNGLRACLNKGFLDFFQEADADVFCVQETKMQQGQAEL-ALEGYEQFWCSAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G A+ ++ P+ + + + D + R I F + N+Y P+ + Sbjct: 60 KGYSGTAVFTRIPPVSVAYGIGIPEFDTEGRVITVEFE----KFTLINVYTPNAQRGLTR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 D + R RL+ +P++ GD N+ D N +A F+ E R Sbjct: 116 I--DFRMQWEDAFRVYLLRLQESKPVVVCGDLNVAHNEIDLKNYKTNRGNAGFSDEERGK 173 Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +L G TD+ R + Y++W Y ++ + N G RID+ + S + + I Sbjct: 174 MTELLQSGLTDSFRYLYPEKTGCYTWWSYMFNARANNAGWRIDYFLTSDVLKDQIEDSVI 233 Query: 242 DTKPRGWTKPSDHTPVIV 259 ++ G SDH P+ + Sbjct: 234 YSEVLG----SDHCPIGL 247 >gi|188583700|ref|YP_001927145.1| exodeoxyribonuclease III Xth [Methylobacterium populi BJ001] gi|179347198|gb|ACB82610.1| exodeoxyribonuclease III Xth [Methylobacterium populi BJ001] Length = 269 Score = 182 bits (461), Expect = 6e-44, Method: Composition-based stats. Identities = 76/268 (28%), Positives = 128/268 (47%), Gaps = 9/268 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62 +TV TWN+NS+R RI ++ +++E PD++CLQETK D+ FP + + Y +I GQ Sbjct: 3 LTVTTWNINSVRLRIESVLRFLREEQPDVLCLQETKCPDELFPLKAFKGSGYENIVFAGQ 62 Query: 63 KSYNGVAILSKYQ--PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 K YNGVAI+S++ +++ D + + + + + Y+P G + Sbjct: 63 KGYNGVAIVSRFPLLTRDVMRFCERADARHISAVLGPE-AGPAAGIVLHDFYVPAGGDVP 121 Query: 121 STKYDDKISWIKRFLRFASQR--LELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + K + FL + P I GD N+ P HD ++ + T Sbjct: 122 HRDLNPKFAHKLDFLSELRAWGGRRVSGPAILVGDLNVAPLEHDVWSHKQLLDVVSHTPV 181 Query: 179 VRQS--FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSL 235 ++ + + A T + +Y++W Y + +W NKG R+DH +SP+ Sbjct: 182 ETEALETLRGEAGWIDAARLLTPEPEKIYTWWSYRSPNWELANKGRRLDHAWVSPDLAGT 241 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + + RGW KPSDH PV +SL++ Sbjct: 242 VRKVAVFHAARGWEKPSDHVPVTLSLEL 269 >gi|51598785|ref|YP_072973.1| exodeoxyribonuclease III [Borrelia garinii PBi] gi|51573356|gb|AAU07381.1| exodeoxyribonuclease III [Borrelia garinii PBi] Length = 255 Score = 182 bits (461), Expect = 6e-44, Method: Composition-based stats. Identities = 58/260 (22%), Positives = 103/260 (39%), Gaps = 12/260 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCG 61 + + +WNVN IRA + ++KE PDI+C+QETK + P + + Y + Sbjct: 1 MKLISWNVNGIRAVLKKGFLEFVKEYTPDILCVQETKALKEQLPRDLILENYYSYFSKSK 60 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 K Y+GV I SK +PI + + I + + Sbjct: 61 IKGYSGVCIYSKVKPISVNLLGKEIFDNEGRGLIAYYDNF------VLINGYFPNSQALR 114 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + K++++ + + ++ GD+NI D +P + + +E Sbjct: 115 RRLVYKLNFLSYVENLIDSLVNGGKNVVICGDFNIAHTKIDLISPDSNRDSPGYYIEETT 174 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 N G+ D R + Y++W Y + +N G RID+ +++ + + I Sbjct: 175 WLDSFLNKGYVDTFRIFNKEPGYYTWWSYRTRARERNMGWRIDYFVVNEFFKRNVKKSLI 234 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 K G SDH PV + L Sbjct: 235 LDKVMG----SDHCPVFLEL 250 >gi|294669077|ref|ZP_06734163.1| exodeoxyribonuclease III [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291309069|gb|EFE50312.1| exodeoxyribonuclease III [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 300 Score = 182 bits (461), Expect = 6e-44, Method: Composition-based stats. Identities = 61/265 (23%), Positives = 114/265 (43%), Gaps = 13/265 (4%) Query: 2 SVVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 +++ + + NVN IR+ +I + DIIC+QE K ++ + E H Sbjct: 42 NMLKIISANVNGIRSAYKKGFYEYIAASGADIICVQELKAQEADLSDEMKNPHGMHGHWH 101 Query: 61 G--QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 ++ Y+GVA+ SK P + + ++ D + RF+ F + Sbjct: 102 CAEKRGYSGVAVYSKRAPDNVQIGMGIEEFDREGRFVRCDFGKLSVI-----SLYLPSGT 156 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + + K ++ F ++ GD+NI Q D N + ++ F E Sbjct: 157 SAPERQELKYRFLDAFYPMLEAMKAEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPE 216 Query: 179 VRQSF-QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 R+ + + +G+TD R + + Y++W +++K+ G RID+ M++PE + Sbjct: 217 EREWIGKVIHTLGWTDMWRTLYPDNPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAV 276 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLD 262 SA + K SDH P++V D Sbjct: 277 SAHVYKD----EKFSDHAPLVVEYD 297 >gi|288803025|ref|ZP_06408461.1| exodeoxyribonuclease III [Prevotella melaninogenica D18] gi|288334542|gb|EFC72981.1| exodeoxyribonuclease III [Prevotella melaninogenica D18] Length = 249 Score = 182 bits (461), Expect = 6e-44, Method: Composition-based stats. Identities = 68/260 (26%), Positives = 111/260 (42%), Gaps = 12/260 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + K+ + D CLQETK + + + Sbjct: 1 MKFISWNVNGLRACVGKEFEQQFKDLDADFFCLQETKMQAGQLDIS-FLGYESYWNYADK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K++P+ + + D+ D + R I + + + G Sbjct: 60 KGYSGTAIFTKHKPLSVTYGINIDEHDHEGRVITLEMD-DFYLVTVYTPNSQDGLRRLDY 118 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + + +L+ ++P+I GD N+ Q D NP +A FT E R+ Sbjct: 119 R-----MKWEDDFQAYLHKLDEKKPVIVCGDMNVAHQEIDLKNPKTNRKNAGFTDEEREK 173 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 +L + GF D R + YS+W Y + KN G RID+ ++S L A+I Sbjct: 174 MTQLLSNGFIDTFRTLYPEQVTYSWWSYRFRAREKNTGWRIDYFLISERLKDRLEDAKIH 233 Query: 243 TKPRGWTKPSDHTPVIVSLD 262 T+ G SDH PV + L Sbjct: 234 TEIMG----SDHCPVEIILK 249 >gi|229162671|ref|ZP_04290628.1| Exodeoxyribonuclease [Bacillus cereus R309803] gi|228620553|gb|EEK77422.1| Exodeoxyribonuclease [Bacillus cereus R309803] Length = 252 Score = 182 bits (461), Expect = 6e-44, Method: Composition-based stats. Identities = 69/259 (26%), Positives = 119/259 (45%), Gaps = 14/259 (5%) Query: 4 VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + +WNVN +RA +++E+N DI CLQE K +D L+ + Sbjct: 1 MKLISWNVNGLRAVIAKGGFLEYLEESNADIFCLQEIKLQDGQIDLN-LEGYYTYWNYAV 59 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G AI SK +P+ + L ++ D + R I F + Sbjct: 60 KKGYSGTAIFSKKEPLSVTYGLGIEEHDQEGRVITLEFEDFHMI-----TLYTPNSKRGL 114 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + D ++ W F + + L+ ++P+IF GD N+ + D NP + F+ E R+ Sbjct: 115 ERLDYRMKWEDDFRAYIKR-LDEKKPVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEERE 173 Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 F + GF D R + YS+W Y + +KN G R+D+ ++S + + A+ Sbjct: 174 KFTCVLEEGFIDTYRYLYPDQKGAYSWWSYRMGARAKNIGWRLDYFVVSERMKNQITEAK 233 Query: 241 IDTKPRGWTKPSDHTPVIV 259 I+++ G SDH PV + Sbjct: 234 INSEVMG----SDHCPVEL 248 >gi|167748893|ref|ZP_02421020.1| hypothetical protein ANACAC_03667 [Anaerostipes caccae DSM 14662] gi|317470265|ref|ZP_07929659.1| exodeoxyribonuclease III [Anaerostipes sp. 3_2_56FAA] gi|167651863|gb|EDR95992.1| hypothetical protein ANACAC_03667 [Anaerostipes caccae DSM 14662] gi|316902238|gb|EFV24158.1| exodeoxyribonuclease III [Anaerostipes sp. 3_2_56FAA] Length = 251 Score = 182 bits (461), Expect = 6e-44, Method: Composition-based stats. Identities = 72/262 (27%), Positives = 113/262 (43%), Gaps = 13/262 (4%) Query: 3 VVTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ + +WNVN +RA + +++ + DI C+QETK ++ E L + Sbjct: 1 MIQLVSWNVNGLRACVKKGFLDVMEQLDADIFCIQETKLQEGQIDLE-LPDYYQYWNYAE 59 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G A+ +K +P+ + + D+ D + R I F + + + Sbjct: 60 KKGYSGTAVFTKIKPLSVKNGIGVDEFDHEGRVITLEF---DDYFLVTCYTPNSQSELAR 116 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 Y R +LE ++P+I GD N+ D NP +A FT E R+ Sbjct: 117 LSYRMDWEENFREY---LLKLEEDKPVILCGDLNVAHTEIDLKNPKTNRKNAGFTDEERE 173 Query: 182 SFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 F KL GF D R + YS+W Y + KN G RID+ +S L A Sbjct: 174 KFTKLLEAGFIDTFRHFYPDVTEAYSWWSYRFRAREKNAGWRIDYFCVSEGLEERLAEAV 233 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I T G SDH PV + L+ Sbjct: 234 IHTDIYG----SDHCPVGLYLE 251 >gi|332169669|gb|AEE18924.1| exodeoxyribonuclease III Xth [Krokinobacter diaphorus 4H-3-7-5] Length = 254 Score = 182 bits (461), Expect = 6e-44, Method: Composition-based stats. Identities = 73/264 (27%), Positives = 129/264 (48%), Gaps = 13/264 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60 + + ++NVN IRA + + A W++ +PD++ LQETK +SL Y + + Sbjct: 1 MKIISYNVNGIRAALRKDFATWLQHTDPDVVLLQETKATPDQVDTAVFESLGYEHYWFSA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GVAIL+K P +V + +D + R I F + + ++YLP G I Sbjct: 61 QKKGYSGVAILTKKTPKNVVYGTGIESMDFEGRNIRVDFD----DVSVMSMYLPSGTNIA 116 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K+ ++ + ++ + L+ GDYNI + D ++P+ +N + F R Sbjct: 117 R--LEHKLEYMSLLQDYVNKIKQDVPNLVIGGDYNICHEAIDIHDPVRNKNVSGFLPVER 174 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + + GF D+ R + Y++W Y A++ + NKG RID+ M+S + + A Sbjct: 175 EWISNFMDSGFIDSFRHLNKEPDNYTWWSYRANARANNKGWRIDYNMVSEPLKNNIERAV 234 Query: 241 IDTKPRGWTKPSDHTPVIVSLDIP 264 I + SDH P +V L + Sbjct: 235 ILSDA----VHSDHCPHMVELKLS 254 >gi|160947302|ref|ZP_02094469.1| hypothetical protein PEPMIC_01235 [Parvimonas micra ATCC 33270] gi|158446436|gb|EDP23431.1| hypothetical protein PEPMIC_01235 [Parvimonas micra ATCC 33270] Length = 250 Score = 182 bits (461), Expect = 6e-44, Method: Composition-based stats. Identities = 69/261 (26%), Positives = 110/261 (42%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA I + E N D CLQE K + E L+ + Sbjct: 1 MRFISWNVNGLRACIKKGFLDYFNEINADFFCLQEIKMSEGQLDLE-LEGYETFYNYAQR 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K++P+ + + ++ D + R I + + Sbjct: 60 KGYSGTAIFTKFKPLSVKYGMGMEEHDNEGRLITLEYDDF-----FLVTCYTPNSKQELL 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + D ++ W F + L + +I GD N+ + D NP +A FT E R+ Sbjct: 115 RLDYRMVWEDAFRNYLLD-LNKTKSVIVCGDLNVAHKEIDLKNPKTNRKNAGFTDEEREK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 L + GFTD R + + YS+W Y+ S +N G RID+ + S + L A+I Sbjct: 174 MSILLDSGFTDTFRYFYPDKENEYSWWSYFGKSRERNTGWRIDYFLTSKDMDDRLVDAQI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 G SDH PV + + Sbjct: 234 HQSILG----SDHCPVYLEIK 250 >gi|30021833|ref|NP_833464.1| exodeoxyribonuclease III [Bacillus cereus ATCC 14579] gi|229129016|ref|ZP_04257989.1| Exodeoxyribonuclease [Bacillus cereus BDRD-Cer4] gi|29897389|gb|AAP10665.1| Exodeoxyribonuclease III [Bacillus cereus ATCC 14579] gi|228654253|gb|EEL10118.1| Exodeoxyribonuclease [Bacillus cereus BDRD-Cer4] Length = 252 Score = 182 bits (461), Expect = 6e-44, Method: Composition-based stats. Identities = 67/262 (25%), Positives = 120/262 (45%), Gaps = 14/262 (5%) Query: 4 VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + +WNVN +RA +++E++ DI CLQE K ++ L+ + Sbjct: 1 MKLISWNVNGLRAVIAKGGFLEYLEESSADIFCLQEIKLQEGQIDLN-LEGYYTYWNYAV 59 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G AI SK +P+ + L ++ D + R I F + Sbjct: 60 KKGYSGTAIFSKKEPLSVTYGLGIEEHDQEGRLITLEFEDFYMI-----TLYTPNSKRGL 114 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + D ++ W F + + L+ ++P+IF GD N+ + D NP + F+ E R+ Sbjct: 115 ERLDYRMKWEDDFRSYIKR-LDEKKPVIFCGDLNVAHKEIDLKNPKSNRENPGFSDEERE 173 Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 F + GF D R + YS+W Y + +KN G R+D+ ++S + A+ Sbjct: 174 KFSCILEEGFIDTYRYLYPNQEGAYSWWSYRMGARAKNIGWRLDYFVVSEGMKDQITEAK 233 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I+++ G SDH PV + ++ Sbjct: 234 INSEVMG----SDHCPVELHIN 251 >gi|20808602|ref|NP_623773.1| exonuclease III [Thermoanaerobacter tengcongensis MB4] gi|20517232|gb|AAM25377.1| Exonuclease III [Thermoanaerobacter tengcongensis MB4] Length = 258 Score = 182 bits (461), Expect = 6e-44, Method: Composition-based stats. Identities = 68/260 (26%), Positives = 118/260 (45%), Gaps = 14/260 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + +WNVN +RA + + K + DI C+QETK ++ E L Y+ Sbjct: 1 MKLVSWNVNGLRACLQKGFMDYFKAIDADIFCIQETKLQENQKDIEGLDLNGYYAFWNFA 60 Query: 62 -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+G A+ +KY+P+ + + D + R I + + Sbjct: 61 EKKGYSGTAVFTKYKPLSVSYGIGTPHHDKEGRVITLEYKKF-----FLVNAYTPNSQRG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 T+ + ++ W + F + + L+ +P+I GD N+ Q D NP +A FT E R Sbjct: 116 LTRLNYRMEWEEDFRSYLLK-LDSVKPVILCGDLNVAHQEIDIKNPAANRRNAGFTDEER 174 Query: 181 QSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + L N GF D R + Y++W Y ++ KN G R+D+ ++S L + Sbjct: 175 EKMTILLNSGFIDTFRYFYPDKKDAYTWWSYMHNAREKNIGWRVDYFIVSERLKDYLIDS 234 Query: 240 RIDTKPRGWTKPSDHTPVIV 259 +I ++ G SDH PV++ Sbjct: 235 QIHSEVMG----SDHCPVVL 250 >gi|78067925|ref|YP_370694.1| exodeoxyribonuclease III xth [Burkholderia sp. 383] gi|77968670|gb|ABB10050.1| Exodeoxyribonuclease III xth [Burkholderia sp. 383] Length = 257 Score = 182 bits (461), Expect = 6e-44, Method: Composition-based stats. Identities = 61/264 (23%), Positives = 113/264 (42%), Gaps = 14/264 (5%) Query: 3 VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59 ++ V T N+N IR A W+ E N D +C+QE K + P E ++ + + Sbjct: 1 MMRVITANLNGIRSAAKKGFFEWLGEQNADCVCVQEIKVSADDLPAEFVEPHGFKSYFHH 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G + S+ +P +++ + D + R++EA + L + ++Y+P G+ Sbjct: 61 AEKKGYSGAGVYSRREPDDVIIGFGSSEFDAEGRYVEARYG----KLSVVSVYVPSGSSG 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + L+ + +I GD NI+ + D N + ++ E Sbjct: 117 EERQQA--KYRFMDEFMPHLAALKKKREVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEE 174 Query: 180 RQSFQK-LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R+ K ++G+ D R Y++W +++KN G RID+ + +P S Sbjct: 175 REWLTKLFDDVGYVDVFRTLDPRAEQYTWWSNRGQAYAKNVGWRIDYQIATPGVAGTAKS 234 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 I K SDH P+ + D Sbjct: 235 TSIFKDI----KFSDHAPLTIDYD 254 >gi|242277753|ref|YP_002989882.1| exodeoxyribonuclease III [Desulfovibrio salexigens DSM 2638] gi|242120647|gb|ACS78343.1| exodeoxyribonuclease III [Desulfovibrio salexigens DSM 2638] Length = 255 Score = 182 bits (461), Expect = 6e-44, Method: Composition-based stats. Identities = 60/262 (22%), Positives = 105/262 (40%), Gaps = 8/262 (3%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN RA I N W +++N D++ +QETK P + Y Sbjct: 1 MKIYSWNVNGYRAVIKKNFNEWFEQSNADVVMIQETKAHPDQIPDKNRNIEGYESLWNWS 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K G + + + +++H G + + + + N+Y P+G Sbjct: 61 KVKKGYSGTACFTRQPVLSHSFGLTDEKYQGEGRV-VLMEYEQFYLFNIYYPNGQMSDER 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + ++ L ++P++ GD+N + D NP + F R Sbjct: 120 L--EYKMGFYDSFLEYAEELRKKKPIVVGGDFNTAHKEIDLKNPKANSERSGFLPIERAW 177 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 K G+ D R D+ YS+W Y ++ N G RID+ +S E + +A I+ Sbjct: 178 LDKFIEHGYVDTFRMFDDSPGKYSWWSYRFNARKNNAGWRIDYFFVSEELKHNVKNAWIE 237 Query: 243 TKPRGWTKPSDHTPVIVSLDIP 264 + G SDH P+ + L P Sbjct: 238 SDIMG----SDHCPIGIELSFP 255 >gi|163941424|ref|YP_001646308.1| exodeoxyribonuclease III Xth [Bacillus weihenstephanensis KBAB4] gi|229012920|ref|ZP_04170085.1| Exodeoxyribonuclease [Bacillus mycoides DSM 2048] gi|163863621|gb|ABY44680.1| exodeoxyribonuclease III Xth [Bacillus weihenstephanensis KBAB4] gi|228748174|gb|EEL98034.1| Exodeoxyribonuclease [Bacillus mycoides DSM 2048] Length = 252 Score = 181 bits (460), Expect = 6e-44, Method: Composition-based stats. Identities = 65/262 (24%), Positives = 116/262 (44%), Gaps = 14/262 (5%) Query: 4 VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + +WNVN +RA +++E+N DI CLQE K + + + Sbjct: 1 MKLISWNVNGLRAVIAKGGFLEYLEESNADIFCLQEIKLQSGQIDLNP-EGYYTYWNYAV 59 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G AI +K +PI + L ++ D + R I F + Sbjct: 60 KKGYSGTAIFTKKEPISVTYGLGIEEHDQEGRVITLEFEDFYMI-----TLYTPNSKRGL 114 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + D ++ W F + + L ++ ++F GD N+ + D NP + F+ E R+ Sbjct: 115 ERLDYRMKWEDDFRAYIKR-LNEKKSVVFCGDLNVAHKEIDLKNPKSNRKNPGFSDEERE 173 Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 F + GF D R + YS+W Y + +KN G R+D+ ++S + A+ Sbjct: 174 KFTRTLEEGFVDTYRYLYPDQEGAYSWWSYRMGARAKNIGWRLDYFVVSERMKDKITEAK 233 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I+++ G SDH PV + ++ Sbjct: 234 INSEIMG----SDHCPVELHIN 251 >gi|291439108|ref|ZP_06578498.1| exodeoxyribonuclease [Streptomyces ghanaensis ATCC 14672] gi|291342003|gb|EFE68959.1| exodeoxyribonuclease [Streptomyces ghanaensis ATCC 14672] Length = 273 Score = 181 bits (460), Expect = 7e-44, Method: Composition-based stats. Identities = 54/267 (20%), Positives = 98/267 (36%), Gaps = 8/267 (2%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++TV + NVN +RA W+ + D +CLQE + E + P + + +H+ Sbjct: 8 MLTVTSVNVNGLRAAAKKGFVEWLAQTPADALCLQEVRAEPQQLPEQVREPEGWHVVHAP 67 Query: 62 Q--KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 K GV++ ++ +P + + D R++EA T + G Sbjct: 68 AAAKGRAGVSLYTRREPDRVQVGFGSTEFDGSGRYVEADLPGVTVA-SLYLPSGEVGTER 126 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K ++ + ++ GD+NI + D N ++ F E Sbjct: 127 QEEKVRFMGEFLAYLKELRERAAGEGREVVVCGDWNIAHEKADLKNWRGNTKNSGFLPEE 186 Query: 180 RQSF----QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 R+ + D YS+W Y ++ + G RID+ M +P Sbjct: 187 REWLSRVLTPTDGGYVDVVRKLHPDVDGPYSWWSYRGRAFDNDTGWRIDYQMATPGLAER 246 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262 A ++ + SDH PV V + Sbjct: 247 AVEAYVERAATHAERWSDHAPVTVVFE 273 >gi|25029135|ref|NP_739189.1| putative exodeoxyribonuclease III [Corynebacterium efficiens YS-314] gi|259505870|ref|ZP_05748772.1| exodeoxyribonuclease III [Corynebacterium efficiens YS-314] gi|23494422|dbj|BAC19389.1| putative exodeoxyribonuclease III [Corynebacterium efficiens YS-314] gi|259166544|gb|EEW51098.1| exodeoxyribonuclease III [Corynebacterium efficiens YS-314] Length = 261 Score = 181 bits (460), Expect = 7e-44, Method: Composition-based stats. Identities = 75/267 (28%), Positives = 123/267 (46%), Gaps = 13/267 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + WNVNS R R+ + ++ ++ D++ +QETK D FP+E + + Y + G Sbjct: 1 MRIVNWNVNSARTRVDRMVDFLIRHDVDVLAVQETKCRDDQFPYERFREIGYEVAHFGLS 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQAR-----FIEATFTINTQTLRIGNLYLPHGNP 118 +NGVAI+S+ ++ T PG + +R+ +LY+P+G Sbjct: 61 QWNGVAIISRVGIEDVQTSFPGQPGFDKDPGAEQAIEARAIGAGCGGVRVWSLYVPNGRE 120 Query: 119 ITSTKYDDKISWIKRFLRFASQRL--ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 I YD K+ W+ + L EE +I GD+NI P D ++ +E T Sbjct: 121 IADPHYDYKLRWLFALRNHVADVLRANPEEKMILLGDFNIAPTDQDVWDISAFEGHTHVT 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 R +FQ+L G T+ +++WDY + K +G+RID + +P T Sbjct: 181 EPERAAFQQLIEAGLTETS----PGPGTFTYWDYKGARFLKGEGMRIDFQLATPALT--A 234 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263 +D + RG SDH PVIV + Sbjct: 235 DHTFVDVEERGGKGASDHAPVIVDYSV 261 >gi|118475279|ref|YP_892840.1| exodeoxyribonuclease III [Campylobacter fetus subsp. fetus 82-40] gi|118414505|gb|ABK82925.1| exodeoxyribonuclease III [Campylobacter fetus subsp. fetus 82-40] Length = 252 Score = 181 bits (460), Expect = 7e-44, Method: Composition-based stats. Identities = 66/262 (25%), Positives = 113/262 (43%), Gaps = 12/262 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + +W+ E+ PD + LQE K + P E +L + + Sbjct: 1 MKLISWNVNGLRAALGKESFSWLDEHKPDFLALQEIKVSEDKIPAEIY-NLGFENISANS 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 G + + ++ D + R +E F + + N+Y P+G Sbjct: 60 AKRPGYSGVMSLSNLKSQNLKSQFFDDDEGRVLEHKFD----NIHLFNIYFPNGQ-SGDE 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + K+ + +FL + + + + +IF GD N + D NP + F R Sbjct: 115 RLAYKMDFYDKFLSYINALVSEGKGVIFCGDVNTAHREIDLKNPKANSKTSGFLPIERAW 174 Query: 183 FQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 K+ + GF D R + D + YS+W Y ++ +KN G RID+ +S L A I Sbjct: 175 IDKVIDSGFIDTFRFINGDKENAYSWWSYRFNARAKNVGWRIDYFFISSNLKDKLKDAFI 234 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 G SDH PV + +D+ Sbjct: 235 LDSIEG----SDHCPVGIEIDL 252 >gi|325519880|gb|EGC99152.1| exodeoxyribonuclease III [Burkholderia sp. TJI49] Length = 257 Score = 181 bits (460), Expect = 8e-44, Method: Composition-based stats. Identities = 63/264 (23%), Positives = 112/264 (42%), Gaps = 14/264 (5%) Query: 3 VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59 ++ V T N+N IR A W+ E N D +C+QE K + P E ++ + Sbjct: 1 MMRVITANLNGIRSAAKKGFFEWLGEQNADCVCVQEIKVSADDLPAEFVEPHGLRSYFHH 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G + S+++P +++ + D + R++EA + L I ++Y+P G+ Sbjct: 61 AAKKGYSGAGLYSRHEPDDVIIGFGSSEFDPEGRYVEARYG----KLSIVSVYVPSGSSG 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + L+ + +I GD NI+ + D N + ++ E Sbjct: 117 EERQQA--KYRFMDAFMPHLAELKKKREVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEE 174 Query: 180 RQSFQK-LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R K ++G+ D R Y++W +++KN G RID+ + +P S Sbjct: 175 RAWLTKLFDDVGYVDVFRTLDPRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGVAGTAKS 234 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 I K SDH P+ V D Sbjct: 235 TSIFKDI----KFSDHAPLTVDYD 254 >gi|293571415|ref|ZP_06682444.1| exodeoxyribonuclease III [Enterococcus faecium E980] gi|291608506|gb|EFF37799.1| exodeoxyribonuclease III [Enterococcus faecium E980] Length = 250 Score = 181 bits (460), Expect = 8e-44, Method: Composition-based stats. Identities = 70/261 (26%), Positives = 112/261 (42%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + N E + D CLQETK + + L + + Sbjct: 1 MKFISWNVNGLRAIVNKNFLEVFHELDADFFCLQETKLQAGQIDLD-LPGYYQYWNYAER 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K + + D D + R I ++ + Sbjct: 60 KGYSGTAIFAKKPALNATYGMGIDIHDTEGRLITLEYSDF-----FLVTCYTPNSQSELK 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + D ++ W + F + L+ ++P+I GD N+ Q D N + +A FT E R + Sbjct: 115 RLDYRLEWEEAFYNYLEN-LKKQKPVIVCGDLNVAHQTIDLKNWKTNQKNAGFTPEERAA 173 Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +L + GF D R + +YS+W+Y +S N G RID+ + S + L A+I Sbjct: 174 LSRLLDNGFIDTFRYFYPTQEGVYSWWNYRFNSRKNNAGWRIDYFLTSKDLEPRLADAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 T G SDH PV + L Sbjct: 234 HTDIMG----SDHCPVELDLK 250 >gi|225376286|ref|ZP_03753507.1| hypothetical protein ROSEINA2194_01924 [Roseburia inulinivorans DSM 16841] gi|225211932|gb|EEG94286.1| hypothetical protein ROSEINA2194_01924 [Roseburia inulinivorans DSM 16841] Length = 255 Score = 181 bits (460), Expect = 8e-44, Method: Composition-based stats. Identities = 70/260 (26%), Positives = 113/260 (43%), Gaps = 13/260 (5%) Query: 2 SVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 + +WNVN +RA + + E + D C+QETK ++ + L + Sbjct: 3 KTMKFISWNVNGLRACMQKGFLDFFNEVDADFFCVQETKLQEGQIALD-LPGYHQFWNYA 61 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+G AI +K++P+ + + + D + R I + + Sbjct: 62 EKKGYSGTAIFTKHEPLSVSYGIGIPEHDHEGRVITLEYDAFYL-----VTCYTPNSQNE 116 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + ++ W + FL F + L+ +P+I GD N+ + D NP +A F+ E R Sbjct: 117 LARLPYRMQWEEDFLAFLKR-LDEVKPVIVCGDLNVAHEEIDLKNPKTNRKNAGFSDEER 175 Query: 181 QSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 L N GFTD R + +YS+W Y + KN G RID+ + S L SA Sbjct: 176 AKMTTLLNSGFTDTFRYFYPDKEGIYSWWSYRFKAREKNAGWRIDYFITSRCLDEKLQSA 235 Query: 240 RIDTKPRGWTKPSDHTPVIV 259 I T+ G SDH PV + Sbjct: 236 GIHTEVYG----SDHCPVEL 251 >gi|33591597|ref|NP_879241.1| putative endonuclease [Bordetella pertussis Tohama I] gi|33571240|emb|CAE44701.1| putative endonuclease [Bordetella pertussis Tohama I] Length = 262 Score = 181 bits (460), Expect = 8e-44, Method: Composition-based stats. Identities = 59/265 (22%), Positives = 106/265 (40%), Gaps = 9/265 (3%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59 ++ + + N+N IR+ L W+ +N D++CLQE K + E Y H Sbjct: 1 MLRITSLNLNGIRSAFRKGLQPWMTAHNADVLCLQEIKVSHDDLTDELRHPPGYTGHFHH 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GV + + +V ++ D + R + A + + + G+ Sbjct: 61 AEKKGYSGVGMYLRAGAERVVAGFDCEEFDAEGRILRADWK-DLSVISAYLPSGSSGDER 119 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 TKY + ++ + + GD+NI + D N + ++ F E Sbjct: 120 QQTKYRFLDQFGPWLDGLMAEHRKTGREFVICGDWNIAHKEIDLKNWKGNQKNSGFLPEE 179 Query: 180 RQSFQKLQNMG-FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R ++ + F D R + Y++W +W+KN G RID+ + +P + Sbjct: 180 RAWLTEVFDRRGFVDVFRKLDERADQYTWWSNRGQAWAKNVGWRIDYQIATPGIAERARA 239 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263 I R SDH P+ V DI Sbjct: 240 TSIYKDER----FSDHAPLTVDYDI 260 >gi|293557096|ref|ZP_06675652.1| exodeoxyribonuclease III [Enterococcus faecium E1039] gi|293567361|ref|ZP_06678711.1| exodeoxyribonuclease III [Enterococcus faecium E1071] gi|291589963|gb|EFF21761.1| exodeoxyribonuclease III [Enterococcus faecium E1071] gi|291600740|gb|EFF31036.1| exodeoxyribonuclease III [Enterococcus faecium E1039] Length = 250 Score = 181 bits (460), Expect = 8e-44, Method: Composition-based stats. Identities = 70/261 (26%), Positives = 112/261 (42%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + N E + D CLQETK + + L + + Sbjct: 1 MKFISWNVNGLRAIVNKNFLEVFHELDADFFCLQETKLQAGQIDLD-LPGYYQYWNYAER 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K + + D D + R I ++ + Sbjct: 60 KGYSGTAIFAKKPALNATYGMGIDIHDTEGRLITLEYSDF-----FLVTCYTPNSQSELK 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + D ++ W + F + L+ ++P+I GD N+ Q D N + +A FT E R + Sbjct: 115 RLDYRLEWEEAFYNYLEN-LKKQKPVIVCGDLNVAHQKIDLKNWKTNQKNAGFTPEERAA 173 Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +L + GF D R + +YS+W+Y +S N G RID+ + S + L A+I Sbjct: 174 LSRLLDNGFIDTFRYFYPTQEGVYSWWNYRFNSRKNNAGWRIDYFLTSKDLEPRLADAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 T G SDH PV + L Sbjct: 234 HTDIMG----SDHCPVELDLK 250 >gi|293602414|ref|ZP_06684860.1| exodeoxyribonuclease III [Achromobacter piechaudii ATCC 43553] gi|292819176|gb|EFF78211.1| exodeoxyribonuclease III [Achromobacter piechaudii ATCC 43553] Length = 292 Score = 181 bits (459), Expect = 8e-44, Method: Composition-based stats. Identities = 61/266 (22%), Positives = 105/266 (39%), Gaps = 9/266 (3%) Query: 1 MSVVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HI 57 +++ + + N+N IR+ L W++++ DI+CLQE K D + + Y H Sbjct: 29 FALLRITSINLNGIRSAFRKGLQPWMEKHAADILCLQEIKIADADLTEDLRHPPGYTGHF 88 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 +K Y+GV I + + L ++ D + R I A + N + G+ Sbjct: 89 HHAVKKGYSGVGIYLRDAAERVNIGLGCEEFDPEGRIIRADWK-NLSVISAYLPSGSSGD 147 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 KY + + + GD+NI + D N ++ F Sbjct: 148 ERQQAKYRFLDRFGPWIDALMHEHKTTGREFVICGDWNIAHKEIDLKNWKGNMKNSGFLP 207 Query: 178 EVRQSFQKLQN-MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 E R + + GF D R D Y++W +W+KN G RID+ + +P + Sbjct: 208 EERAWLTDVFDKRGFVDVFRTIDDRPDQYTWWSNRGQAWAKNVGWRIDYQIATPGIAARA 267 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLD 262 + I R SDH P+ + D Sbjct: 268 RNVAIYKDER----FSDHAPLTIDYD 289 >gi|229111211|ref|ZP_04240765.1| Exodeoxyribonuclease [Bacillus cereus Rock1-15] gi|229146311|ref|ZP_04274682.1| Exodeoxyribonuclease [Bacillus cereus BDRD-ST24] gi|296504242|ref|YP_003665942.1| exodeoxyribonuclease III [Bacillus thuringiensis BMB171] gi|228636944|gb|EEK93403.1| Exodeoxyribonuclease [Bacillus cereus BDRD-ST24] gi|228672205|gb|EEL27495.1| Exodeoxyribonuclease [Bacillus cereus Rock1-15] gi|296325294|gb|ADH08222.1| exodeoxyribonuclease III [Bacillus thuringiensis BMB171] Length = 252 Score = 181 bits (459), Expect = 8e-44, Method: Composition-based stats. Identities = 67/262 (25%), Positives = 120/262 (45%), Gaps = 14/262 (5%) Query: 4 VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + +WNVN +RA +++E++ DI CLQE K ++ L+ + Sbjct: 1 MKLISWNVNGLRAVIAKGGFLEYLEESSADIFCLQEIKLQEGQIDLN-LEGYYTYWNYAV 59 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G AI SK +P+ + L ++ D + R I F + Sbjct: 60 KKGYSGTAIFSKKEPLSVTYGLGIEEHDQEGRLITLEFEDFYMI-----TLYTPNSKRGL 114 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + D ++ W F + + L+ ++P+IF GD N+ + D NP + F+ E R+ Sbjct: 115 ERLDYRMKWEDDFRSYIKR-LDEKKPVIFCGDLNVAHKEIDLKNPKSNRENPGFSDEERE 173 Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 F + GF D R + YS+W Y + +KN G R+D+ ++S + A+ Sbjct: 174 KFSCILEEGFIDTYRYLYPNQEGAYSWWSYRMGARAKNIGWRLDYFVVSERMKDQITEAK 233 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I+++ G SDH PV + ++ Sbjct: 234 INSEVMG----SDHCPVELHIN 251 >gi|219684183|ref|ZP_03539127.1| exodeoxyribonuclease III [Borrelia garinii PBr] gi|219672172|gb|EED29225.1| exodeoxyribonuclease III [Borrelia garinii PBr] Length = 255 Score = 181 bits (459), Expect = 9e-44, Method: Composition-based stats. Identities = 57/260 (21%), Positives = 104/260 (40%), Gaps = 12/260 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCG 61 + + +WNVN IRA + +++E PDI+C+QETK + P + + Y + Sbjct: 1 MKLISWNVNGIRAVLKKGFLEFVQEYTPDILCIQETKALKEQLPRDLILENYYSYFSKSK 60 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 K Y+GV I SK +PI + + I + + Sbjct: 61 IKGYSGVCIYSKVKPIAVNLLGKEIFDNEGRGLIAYYDNF------VLINGYFPNSQALR 114 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + K++++ + + ++ GD+NI D +P + + +E Sbjct: 115 RRLVYKLNFLSYVENLIDSLVNGGKNVVICGDFNIAHTKIDLISPDSNRDSPGYYIEETT 174 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 + N G+ D R + Y++W Y + +N G RID+ +++ + + I Sbjct: 175 WLDRFLNKGYVDTFRIFNKEPGYYTWWSYRTRARERNMGWRIDYFVVNEFFKRNVKKSLI 234 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 K G SDH PV + L Sbjct: 235 LDKVMG----SDHCPVFLEL 250 >gi|254479049|ref|ZP_05092404.1| exodeoxyribonuclease III [Carboxydibrachium pacificum DSM 12653] gi|214035005|gb|EEB75724.1| exodeoxyribonuclease III [Carboxydibrachium pacificum DSM 12653] Length = 258 Score = 181 bits (459), Expect = 9e-44, Method: Composition-based stats. Identities = 69/260 (26%), Positives = 118/260 (45%), Gaps = 14/260 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + +WNVN +RA + + K + DI C+QETK ++ E L Y+ Sbjct: 1 MKLVSWNVNGLRACLQKGFMDYFKAIDADIFCIQETKLQENQKDIEGLDLNGYYAFWNFA 60 Query: 62 -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+G A+ +KY+P+ + + D + R I + + Sbjct: 61 EKKGYSGTAVFTKYKPLSVSYGIGTPHHDKEGRVITLEYEKF-----FLVNTYTPNSQRG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 T+ D ++ W + F + + L+ +P+I GD N+ Q D NP +A FT E R Sbjct: 116 LTRLDYRMQWEEDFRSYLLK-LDSLKPVILCGDLNVAHQEIDIKNPAANRRNAGFTDEER 174 Query: 181 QSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + L N GF D R + Y++W Y ++ KN G R+D+ ++S L + Sbjct: 175 EKMTILLNSGFIDTFRYFYPDKKDAYTWWSYMHNAREKNIGWRVDYFIVSERLKDYLIDS 234 Query: 240 RIDTKPRGWTKPSDHTPVIV 259 +I ++ G SDH PV++ Sbjct: 235 QIHSEVMG----SDHCPVVL 250 >gi|150399093|ref|YP_001322860.1| exodeoxyribonuclease III Xth [Methanococcus vannielii SB] gi|150011796|gb|ABR54248.1| exodeoxyribonuclease III Xth [Methanococcus vannielii SB] Length = 257 Score = 181 bits (459), Expect = 9e-44, Method: Composition-based stats. Identities = 71/261 (27%), Positives = 114/261 (43%), Gaps = 12/261 (4%) Query: 3 VVTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ + +WNVN IRA + ++ NP+IIC+QETK + L + Sbjct: 8 IMKMISWNVNGIRACLKNGFMDFLNSKNPEIICIQETKVQKGQVQL-GLNGYFEYWNYAE 66 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G AI +K +P + + D + R I F + + G Sbjct: 67 KKGYSGTAIFTKIEPKSVKYGITNYKSDKEGRVITLEFEEY-FLVNVYTPNSQRGLKRLE 125 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + + + LE ++P+IF GD N+ + D NP +A FT E R Sbjct: 126 CRQ-----KWDKDFLNHLKTLEQKKPVIFCGDLNVAHKEIDLKNPKQNIKNAGFTKEERN 180 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F L N GF D R ++ Y++W Y ++ KN G RID+ +S + L A I Sbjct: 181 GFDNLINSGFLDTFRELNNEPENYTWWSYRFNAREKNIGWRIDYFCISKKLRERLKDAFI 240 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 ++ G SDH PV + ++ Sbjct: 241 MSEVLG----SDHCPVGIIIE 257 >gi|261208808|ref|ZP_05923245.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Enterococcus faecium TC 6] gi|289566402|ref|ZP_06446829.1| exodeoxyribonuclease III [Enterococcus faecium D344SRF] gi|294614472|ref|ZP_06694388.1| exodeoxyribonuclease III [Enterococcus faecium E1636] gi|260077310|gb|EEW65030.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Enterococcus faecium TC 6] gi|289161777|gb|EFD09650.1| exodeoxyribonuclease III [Enterococcus faecium D344SRF] gi|291592780|gb|EFF24373.1| exodeoxyribonuclease III [Enterococcus faecium E1636] Length = 250 Score = 181 bits (459), Expect = 9e-44, Method: Composition-based stats. Identities = 70/260 (26%), Positives = 112/260 (43%), Gaps = 13/260 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + N E + D CLQETK + + L + + Sbjct: 1 MKFISWNVNGLRAIVNKNFLEVFHELDADFFCLQETKLQAGQIDLD-LPGYYQYWNYAER 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K + + D D + R I ++ + Sbjct: 60 KGYSGTAIFAKKPALNATYGMGIDIHDTEGRLITLEYSDF-----FLVTCYTPNSQSELK 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + D ++ W + F + L+ ++P+I GD N+ Q D N + +A FT E R + Sbjct: 115 RLDYRLEWEEAFYNYLEN-LKKQKPVIVCGDLNVAHQKIDLKNWKTNQKNAGFTPEERAA 173 Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +L + GF D R + +YS+W+Y +S N G RID+ + S + L A+I Sbjct: 174 LSRLLDNGFIDTFRYFYPTQEGVYSWWNYRFNSRKNNAGWRIDYFLTSKDLEPRLADAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 T G SDH PV + L Sbjct: 234 HTDIMG----SDHCPVELDL 249 >gi|229104299|ref|ZP_04234968.1| Exodeoxyribonuclease [Bacillus cereus Rock3-28] gi|229117223|ref|ZP_04246601.1| Exodeoxyribonuclease [Bacillus cereus Rock1-3] gi|228666123|gb|EEL21587.1| Exodeoxyribonuclease [Bacillus cereus Rock1-3] gi|228678997|gb|EEL33205.1| Exodeoxyribonuclease [Bacillus cereus Rock3-28] Length = 252 Score = 181 bits (459), Expect = 9e-44, Method: Composition-based stats. Identities = 64/262 (24%), Positives = 120/262 (45%), Gaps = 14/262 (5%) Query: 4 VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + +WNVN +RA +++E+N DI CLQE K + + + Sbjct: 1 MKLISWNVNGLRAVIAKGGFLEYLEESNADIFCLQEIKLQSGQIDLNP-EGYYTYWNYAV 59 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G AI +K +P+ + L ++ D + R I F + + + G Sbjct: 60 KKGYSGTAIFTKKEPLSVTYGLGIEEHDQEGRVITLEFE-DFYMITLYTPNSKRGLERLD 118 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + + + R ++L+ ++P++F GD N+ + D NP + F+ E R+ Sbjct: 119 YRME-----WEDDFRTYIKQLDEKKPVVFCGDLNVAHKEIDLKNPKSNRKNPGFSDEERE 173 Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 F ++ GF D R + YS+W Y + +KN G R+D+ ++S + A+ Sbjct: 174 KFTRILEEGFVDTYRHLYPNQEGAYSWWSYRMGARAKNIGWRLDYFVVSERIKGQITDAK 233 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I+++ G SDH PV + ++ Sbjct: 234 INSEIMG----SDHCPVELHIN 251 >gi|254251096|ref|ZP_04944414.1| Exonuclease III [Burkholderia dolosa AUO158] gi|124893705|gb|EAY67585.1| Exonuclease III [Burkholderia dolosa AUO158] Length = 257 Score = 181 bits (459), Expect = 9e-44, Method: Composition-based stats. Identities = 62/264 (23%), Positives = 112/264 (42%), Gaps = 14/264 (5%) Query: 3 VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59 ++ V T N+N IR A W+ + N D +C+QE K + P E ++ + Sbjct: 1 MMRVITANLNGIRSAAKKGFFDWLGQQNADCVCVQEIKVSADDLPAEFVEPHGLRSYFHH 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G + S+ +P +++ + D + R++EA + L I ++Y+P G+ Sbjct: 61 AAKKGYSGAGLYSRREPDDVIIGFGSSEFDPEGRYVEARYG----KLSIVSVYVPSGSSG 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + L+ + +I GD NI+ + D N + ++ E Sbjct: 117 DERQQA--KYRFMDEFMPHLAELKKKREVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEE 174 Query: 180 RQSFQK-LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R K ++G+ D R Y++W +++KN G RID+ + +P + S Sbjct: 175 RAWLTKLFDDVGYVDVFRTLDPRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGVAATAKS 234 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 I K SDH P+ V D Sbjct: 235 TSIFKDI----KFSDHAPLTVDYD 254 >gi|33598562|ref|NP_886205.1| putative endonuclease [Bordetella parapertussis 12822] gi|33603508|ref|NP_891068.1| putative endonuclease [Bordetella bronchiseptica RB50] gi|33574691|emb|CAE39344.1| putative endonuclease [Bordetella parapertussis] gi|33577632|emb|CAE34897.1| putative endonuclease [Bordetella bronchiseptica RB50] Length = 262 Score = 181 bits (459), Expect = 9e-44, Method: Composition-based stats. Identities = 58/265 (21%), Positives = 105/265 (39%), Gaps = 9/265 (3%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59 ++ + + N+N IR+ L W+ +N D++CLQE K + E Y H Sbjct: 1 MLRITSLNLNGIRSAFRKGLQPWMTAHNADVLCLQEIKVSHDDLTDELRHPPGYTGHFHH 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GV + + +V ++ D + R + A + + + G+ Sbjct: 61 AEKKGYSGVGMYLRAGAERVVAGFDCEEFDAEGRILRADWK-DLSVISAYLPSGSSGDER 119 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 KY + ++ + + GD+NI + D N + ++ F E Sbjct: 120 QQAKYRFLDQFGPWLDGLMAEHRKTGREFVICGDWNIAHKEIDLKNWKGNQKNSGFLPEE 179 Query: 180 RQSFQKLQNMG-FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R ++ + F D R + Y++W +W+KN G RID+ + +P + Sbjct: 180 RAWLTEVFDRRGFVDVFRKLDERADQYTWWSNRGQAWAKNVGWRIDYQIATPGIAERARA 239 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263 I R SDH P+ V DI Sbjct: 240 TSIYKDER----FSDHAPLTVDYDI 260 >gi|90421802|ref|YP_530172.1| exodeoxyribonuclease III (xth) [Rhodopseudomonas palustris BisB18] gi|90103816|gb|ABD85853.1| exodeoxyribonuclease III (xth) [Rhodopseudomonas palustris BisB18] Length = 270 Score = 181 bits (459), Expect = 9e-44, Method: Composition-based stats. Identities = 75/270 (27%), Positives = 129/270 (47%), Gaps = 10/270 (3%) Query: 4 VT--VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETC 60 + ++TWN+NS+R RI +A +++ PD++CLQETK D FP + + L Y H+ Sbjct: 1 MRFSLSTWNINSVRLRIDLVAKFLESERPDVLCLQETKCPDDAFPLKRFKRLGYEHVALN 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 GQK Y+GVAI+S+ + ++LD + + + L + N Y+P G I Sbjct: 61 GQKGYHGVAIISRLPFASTDVRIFCENLDSRHISVAFAAEHTSAPLVLHNFYVPAGGDIP 120 Query: 121 ----STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + K+ K++++ + + I GD N+ P HD ++ T Sbjct: 121 DPELNPKFKHKLAFLDEMKSCEPLHPQGDARHILVGDLNVAPHEHDVWSHKQLLKVVSHT 180 Query: 177 LEVRQS--FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEAT 233 + + Q A + +Y++W Y A W+ N+G R+DHI +SP Sbjct: 181 PIECEKLLAAQHQGGWLDVARERIALSDKIYTWWSYRAADWTIANRGRRLDHIWVSPALG 240 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + ++ RGW +PSDH PV V++++ Sbjct: 241 PCVQDYQVTRDARGWERPSDHVPVTVTMEL 270 >gi|228922454|ref|ZP_04085756.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228837168|gb|EEM82507.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 252 Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats. Identities = 68/262 (25%), Positives = 120/262 (45%), Gaps = 14/262 (5%) Query: 4 VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + +WNVN +RA +++E++ DI CLQE K ++ L+ + Sbjct: 1 MKLISWNVNGLRAVIAKGGFLEYLEESSADIFCLQEIKLQEGQIDLN-LEGYYTYWNYAV 59 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G AI SK +P+ + L ++ D + R I F + Sbjct: 60 KKGYSGTAIFSKKEPLSVTYGLDIEEHDQEGRLITLEFEDFYMI-----TLYTPNSKRGL 114 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + D ++ W F + + L+ ++P+IF GD N+ + D NP + F+ E R+ Sbjct: 115 ERLDYRMKWEDDFRSYIKR-LDEKKPVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEERE 173 Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 F + GF D R + YS+W Y + +KN G R+D+ ++S + A+ Sbjct: 174 KFSCILEEGFIDTYRYLYPDQEDAYSWWSYRMGARAKNIGWRLDYFVVSERMKDQITEAK 233 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I+T+ G SDH PV + ++ Sbjct: 234 INTEVMG----SDHCPVELHIN 251 >gi|294055155|ref|YP_003548813.1| exodeoxyribonuclease III Xth [Coraliomargarita akajimensis DSM 45221] gi|293614488|gb|ADE54643.1| exodeoxyribonuclease III Xth [Coraliomargarita akajimensis DSM 45221] Length = 262 Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats. Identities = 73/265 (27%), Positives = 109/265 (41%), Gaps = 7/265 (2%) Query: 1 MSVVTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIE 58 MS + +WNVN +RA + ++ PD++CLQETK Y + Sbjct: 1 MSPTHLLSWNVNGLRAVLKKGFDDFLASQQPDVLCLQETKISADLTADFAFAGYPYVYWN 60 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 +K Y+G AI+S+ +PI + L + D + R I A F H Sbjct: 61 CAEKKGYSGTAIISQIEPISVRYGLGIEKHDQEGRVITAEFEDYYLVTVYTPNSQNHDEN 120 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + D + + LE+ +P++F GD N+ D NP +A FT E Sbjct: 121 KRPRRLDYRTLEWDVDFLAYVKGLEVTKPVVFCGDLNVAHTEIDLANPKTNRKNAGFTDE 180 Query: 179 VRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 R F + GF D R + YS+W Y A + +N G RID+ +S + + Sbjct: 181 ERGRFDAIIEAGFIDTFRHLYPDRTEQYSWWSYRAAARQRNIGWRIDYFCVSDAVKNQIR 240 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLD 262 A I G SDH PV + L Sbjct: 241 DATILADTLG----SDHCPVGLRLK 261 >gi|107024036|ref|YP_622363.1| exodeoxyribonuclease III (xth) [Burkholderia cenocepacia AU 1054] gi|116691123|ref|YP_836746.1| exodeoxyribonuclease III Xth [Burkholderia cenocepacia HI2424] gi|170734454|ref|YP_001766401.1| exodeoxyribonuclease III Xth [Burkholderia cenocepacia MC0-3] gi|254246884|ref|ZP_04940205.1| AP endonuclease, family 1 [Burkholderia cenocepacia PC184] gi|105894225|gb|ABF77390.1| exodeoxyribonuclease III (xth) [Burkholderia cenocepacia AU 1054] gi|116649212|gb|ABK09853.1| exodeoxyribonuclease III Xth [Burkholderia cenocepacia HI2424] gi|124871660|gb|EAY63376.1| AP endonuclease, family 1 [Burkholderia cenocepacia PC184] gi|169817696|gb|ACA92279.1| exodeoxyribonuclease III Xth [Burkholderia cenocepacia MC0-3] Length = 257 Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats. Identities = 61/264 (23%), Positives = 113/264 (42%), Gaps = 14/264 (5%) Query: 3 VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59 ++ V T N+N IR A W+ E N D +C+QE K + P E ++ + + Sbjct: 1 MMRVITANLNGIRSAAKKGFFDWLGEQNADCVCVQEIKVSADDLPAEFVEPHGFKSYFHH 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G + S+ +P +++ + D + R++EA + L + ++Y+P G+ Sbjct: 61 AEKKGYSGAGVYSRREPDDVIIGFGSSEFDPEGRYVEARYG----KLSVVSVYVPSGSSG 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + L+ + +I GD NI+ + D N + ++ E Sbjct: 117 EERQQA--KYRFMAEFMPHLAALKKKREVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEE 174 Query: 180 RQSFQK-LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R+ K ++G+ D R Y++W +++KN G RID+ + +P S Sbjct: 175 REWLTKLFDDVGYVDVFRTLDQRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGVAGTAKS 234 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 I K SDH P+ + D Sbjct: 235 TSIFKDI----KFSDHAPLTIDYD 254 >gi|157164085|ref|YP_001465973.1| exodeoxyribonuclease III [Campylobacter concisus 13826] gi|112801830|gb|EAT99174.1| exodeoxyribonuclease III [Campylobacter concisus 13826] Length = 252 Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats. Identities = 68/263 (25%), Positives = 116/263 (44%), Gaps = 14/263 (5%) Query: 4 VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + +WNVN +RA W+ E PD + LQE K ++ + P E +L + + Sbjct: 1 MKLISWNVNGLRAVVAKDGFG-WLDEVKPDFLGLQEIKVKEDDVPKEIY-NLGFKDISVN 58 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 + G + + E+ T D + R +E F + + N+Y P+G Sbjct: 59 SGARAGYSGVMSLAKFEVQTQKAAFFDDTEGRVLEHRFD----DIVLFNIYFPNGQ-KDD 113 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + K+ + ++FL + + ++ + +IF GD N + D NP + F R Sbjct: 114 ERLAYKMDFYEKFLAYCKELVKSGKEVIFCGDVNTAHREIDLKNPKANAKTSGFLPIERA 173 Query: 182 SFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 ++ GF D RA + D YS+W Y ++ +KN G RID+ +S L A Sbjct: 174 WIDEVLKSGFIDTFRAVNGDVADAYSWWSYRFNARAKNVGWRIDYFFISQGLKDRLKDAF 233 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263 I + G SDH PV + ++I Sbjct: 234 ILPEIVG----SDHCPVGIEIEI 252 >gi|317401341|gb|EFV81978.1| endonuclease [Achromobacter xylosoxidans C54] Length = 262 Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats. Identities = 60/264 (22%), Positives = 106/264 (40%), Gaps = 9/264 (3%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59 ++ + + N+N IR+ L W++++ D++CLQE K D++ + Y H Sbjct: 1 MLRITSINLNGIRSAFRKGLQPWMEKHAADVLCLQEIKVSDEDLTEDLRHPPGYTGHFHH 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GV I + + L ++ D + R I A + N + G+ Sbjct: 61 AVKKGYSGVGIYLRDAAERVSIGLGCEEFDPEGRIIRADWK-NLSVISAYLPSGSSGDER 119 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 KY + + + + GD+NI + D N ++ F E Sbjct: 120 QQAKYRFLDRFGPWIDELMHEHKKTGREFVICGDWNIAHKEIDLKNWKGNLKNSGFLPEE 179 Query: 180 RQSFQKLQN-MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R + + GF D R + Y++W +W+KN G RID+ + +P + S Sbjct: 180 RAWLTDVFDKRGFVDVFRTIDERPDQYTWWSNRGQAWAKNVGWRIDYQIATPGIAARARS 239 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 I R SDH P+ + D Sbjct: 240 VAIYKDER----FSDHAPLTIDYD 259 >gi|229168476|ref|ZP_04296199.1| Exodeoxyribonuclease [Bacillus cereus AH621] gi|228614882|gb|EEK71984.1| Exodeoxyribonuclease [Bacillus cereus AH621] Length = 252 Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats. Identities = 67/262 (25%), Positives = 118/262 (45%), Gaps = 14/262 (5%) Query: 4 VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + +WNVN +RA +++E+N DI CLQE K + + + Sbjct: 1 MKLISWNVNGLRAVIAKGGFLEYLEESNADIFCLQEIKLQSGQIDLNP-EGYYTYWNYAV 59 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G AI +K +PI + L ++ D + R I F + Sbjct: 60 KKGYSGTAIFTKKEPISVTYGLGIEEHDQEGRVITLEFDDFYMI-----TLYTPNSKRGL 114 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + D ++ W F + + L+ ++P+IF GD N+ + D NP + F+ E R+ Sbjct: 115 ERLDYRMEWEDDFRAYIKR-LDEKKPVIFCGDLNVAHKEVDLKNPKSNRKNPGFSDEERE 173 Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 F + GF D R + YS+W Y + +KN G R+D+ ++S + A+ Sbjct: 174 KFTCVLEAGFIDTYRYLYPDQEGAYSWWSYRMGARAKNIGWRLDYFVISERLKHKITDAK 233 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I+++ G SDH PV + ++ Sbjct: 234 INSEVMG----SDHCPVELHIN 251 >gi|56963720|ref|YP_175451.1| exodeoxyribonuclease III [Bacillus clausii KSM-K16] gi|56909963|dbj|BAD64490.1| exodeoxyribonuclease III [Bacillus clausii KSM-K16] Length = 260 Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats. Identities = 67/270 (24%), Positives = 114/270 (42%), Gaps = 13/270 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + + ++ + D+ CLQETK + E L + + Sbjct: 1 MKFVSWNVNGLRACVKKGFLDFFQQVDADVFCLQETKLQKGQISLE-LPGYEQYWNDAER 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K+ P+ + + + + R I F + Sbjct: 60 KGYSGTAIFTKHSPLSVTYGIGDHFPENEGRVITLEFET-----YYVVTMYTPNAKRDLS 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + ++ W K + L ++P++F GD N+ QP D N ++ FT E R Sbjct: 115 RLPYRLQWEKAAREY-LTLLATQKPVVFCGDLNVAHQPIDVRNDRANVGNSGFTDEERAE 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F KL GF D R + +++W Y A+ ++N G RID+ ++S L A I Sbjct: 174 FGKLLEAGFVDTFRHFYPDDEDAFTWWSYMANVRARNIGWRIDYFLISRALMPYLVDASI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271 + G SDH P+ + LD+ + Sbjct: 234 HSSVLG----SDHCPIELCLDLQPNESSRP 259 >gi|315657850|ref|ZP_07910730.1| exodeoxyribonuclease III [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315491647|gb|EFU81258.1| exodeoxyribonuclease III [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 286 Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats. Identities = 69/286 (24%), Positives = 122/286 (42%), Gaps = 27/286 (9%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSIR R++ + A+++ N D++ +QE K + FP ++ Y + G Sbjct: 1 MRIATWNVNSIRTRVNRVTAFLERENIDVLAMQEIKCRNDQFPTLAFETAGYQVFVNGLN 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT---------INTQTLRIGNLYLP 114 +NGVA+ ++ + Q F + + +LY+P Sbjct: 61 QWNGVAVAARQGISAHLLGTEFYGSIDQPYFSVPPKPPQLEPRVLGVRVAGVECWSLYVP 120 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPL--IFAGDYNIIPQPHDCYNPIIWEND 172 +G + Y K+ W+ + L+ + ++ GD+N+ P+ D ++ + Sbjct: 121 NGREVGHLHYQYKLKWLDSLRSHVIRTLDTDPESLGLYLGDFNVAPRDEDVWDMADFAGA 180 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHD----------------THHLYSFWDYYADSWS 216 + RQ F KL + HD +++WDY W Sbjct: 181 THVSEPERQVFAKLLDPDTVADAVTLHDDLIEGLPGNLTEITRKFAPGWTYWDYQRARWR 240 Query: 217 KNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 +N+G++ID + +P S + A IDT R +PSDH PVIV + Sbjct: 241 RNQGMKIDFALATPRLASRVTGAYIDTAERDGEQPSDHAPVIVDFE 286 >gi|150398248|ref|YP_001328715.1| exodeoxyribonuclease III [Sinorhizobium medicae WSM419] gi|150029763|gb|ABR61880.1| exodeoxyribonuclease III [Sinorhizobium medicae WSM419] Length = 268 Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats. Identities = 70/266 (26%), Positives = 110/266 (41%), Gaps = 6/266 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 +++ATWN+NS+R R+ + ++K PDI+CLQE K + FP L+ L Y + Sbjct: 3 LSIATWNINSVRLRMPLVEHFLKTWQPDILCLQEIKCINDQFPSAPLRKLGYEYIEMHGQ 62 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 P+ ++ AR + F +T+R+ N Y+P G Sbjct: 63 KGYHGVATISRLPLHQLSDRRDYCGIGDARHLSVVFAAGGKTIRLHNFYVPAGGDEPDRT 122 Query: 124 YDDKISWIKRFLRFASQRL---ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K F+ E I GD NI P HD ++ T Sbjct: 123 VNPKFGHKLDFVDEMKLLHAEAEEGISSILVGDLNIAPLEHDVWSHKQLLKIVSHTPIET 182 Query: 181 QSFQKLQNMGFTDAIRATH--DTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLLH 237 + + G + H LY++W Y A W + ++G R+DHI S + + L Sbjct: 183 EGLISVMTGGAWVDLMRRHTPPPEKLYTWWSYRAKDWAAADRGRRLDHIWSSADLANQLV 242 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263 I + RGW +PSDH PVI ++ Sbjct: 243 RVEIIKEARGWERPSDHVPVIAHFEL 268 >gi|291523803|emb|CBK89390.1| exodeoxyribonuclease III [Eubacterium rectale DSM 17629] Length = 251 Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats. Identities = 66/261 (25%), Positives = 111/261 (42%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + + + D C+QE+K + + L + + + Sbjct: 1 MKFISWNVNGLRACVQKGFLDFFNSIDVDFFCIQESKLQAGQIDLD-LPGYHQYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +P+ + + ++ D + R I + + Y P+ Sbjct: 60 KGYSGTAIFAKNEPLSVSYGIGIEEHDKEGRVITLEYD----NFYLVTCYTPNSQNELKR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 ++ W F + L+ ++P++ GD N+ D NP +A F+ E R Sbjct: 116 -LPYRMQWEDDFREYLKA-LDAQKPVVLCGDLNVAHNEIDLKNPKTNRKNAGFSDEERAK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +L GFTD R + +YS+W Y + KN G RID+ + S L A I Sbjct: 174 MTELLGSGFTDTFRYFYPDAEGIYSWWSYRFKAREKNAGWRIDYFITSKRINDKLKKAAI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 T G SDH PV V ++ Sbjct: 234 HTDVLG----SDHCPVEVDIE 250 >gi|298528123|ref|ZP_07015527.1| exodeoxyribonuclease III [Desulfonatronospira thiodismutans ASO3-1] gi|298511775|gb|EFI35677.1| exodeoxyribonuclease III [Desulfonatronospira thiodismutans ASO3-1] Length = 254 Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats. Identities = 64/261 (24%), Positives = 110/261 (42%), Gaps = 8/261 (3%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN RA W ++ N D++CLQETK P + + Y+I Sbjct: 1 MIIYSWNVNGFRAVTGKGFWDWFQDRNIDVLCLQETKAHPDQLPAKDKEVSGYNIYWNPA 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 + G + + + +E G + + ++ + N+Y P+G Sbjct: 61 RIKKGYSGTACFYRLEPQYISTGLPQEHLNGEGRM-ILMEYESFYLFNVYFPNGQMSHER 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 +Q L ++P++ GD+N + D NP E+ + F RQ Sbjct: 120 LK--FKLNYYDRFLEYAQDLRRKKPIVVCGDFNTAHKDIDLKNPRANEDRSGFLPVERQW 177 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 K + G+ D R + Y++W Y + S+N G RID+ +S E S + +A I+ Sbjct: 178 LDKFIDHGYVDTFRMFNQEGGNYTWWTYRFGARSRNAGWRIDYFFVSEELRSNVQNAWIE 237 Query: 243 TKPRGWTKPSDHTPVIVSLDI 263 + G SDH PV + L+I Sbjct: 238 PQVMG----SDHCPVGLKLNI 254 >gi|167950326|ref|ZP_02537400.1| exonuclease III [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 272 Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats. Identities = 80/272 (29%), Positives = 128/272 (47%), Gaps = 12/272 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N N IR R H L + ++PD+I +QE+K +D++FP E +L ++ GQK Sbjct: 1 MKIVSFNTNGIRTREHQLQQLKQRHDPDVIGIQESKVQDQDFPLEMTSALGFNAGYFGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-TQTLRIGNLYLPHG--NPIT 120 ++ GVA+LSK P+ + PGD +D Q R I F + + + LP G +T Sbjct: 61 THYGVALLSKQAPLSLQKGFPGDPVDAQRRMIIGRFATDKGNQVTVIKWLLPAGVRTSLT 120 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDAC 174 + S + Q ++ L+ GD NI P D + C Sbjct: 121 RSNIRLSASSTPICSLYLQQHHSPDDNLLVIGDMNIAPLDLDIGIGPDNAKRWLKSGKCC 180 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPE 231 F E R+ Q+L + G D R + +S++DY + + + +G+RID I+ S Sbjct: 181 FLPEEREWLQRLTDWGLHDTFRGHYPEVDDRFSWFDYRSRGFDREPKRGLRIDLILASAS 240 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + A ID + RG KPSDH P+ DI Sbjct: 241 LNAACSDAGIDYEIRGMQKPSDHCPIWAEFDI 272 >gi|329941236|ref|ZP_08290515.1| exodeoxyribonuclease [Streptomyces griseoaurantiacus M045] gi|329299767|gb|EGG43666.1| exodeoxyribonuclease [Streptomyces griseoaurantiacus M045] Length = 267 Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats. Identities = 54/267 (20%), Positives = 98/267 (36%), Gaps = 8/267 (2%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++TV + NVN +RA W+ + D++CLQE + E P E + +H+ Sbjct: 1 MLTVTSVNVNGLRAAARKGFVEWLAATSADVLCLQEVRAEPHQMPQEVREPQGWHVVHAP 60 Query: 62 Q--KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 K GV++ ++ +P + + DV R++EA T + G Sbjct: 61 AAAKGRAGVSLYTRREPDAVRVGFGSTEFDVSGRYVEADLPGVTVA-SLYLPSGQVGTER 119 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 KY ++ + ++ GD+NI D N +A F E Sbjct: 120 QDEKYRFMDEFLAYLKELRVRAAAEGREVVVCGDWNIAHHEADLKNWRANTKNAGFLPEE 179 Query: 180 RQSFQKLQN----MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 R ++ + + Y++W Y ++ + G RID + +P Sbjct: 180 RAWLSRVLDAEDGGYVDVMRALHPEVEGPYTWWSYRGRAFDNDSGWRIDLAVATPGLARR 239 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262 ++ + SDH PV V + Sbjct: 240 AVKGFVERAASHEERWSDHAPVTVVYE 266 >gi|254168985|ref|ZP_04875824.1| exodeoxyribonuclease III [Aciduliprofundum boonei T469] gi|197622091|gb|EDY34667.1| exodeoxyribonuclease III [Aciduliprofundum boonei T469] Length = 255 Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats. Identities = 71/266 (26%), Positives = 120/266 (45%), Gaps = 14/266 (5%) Query: 1 MSVVTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 M ++ + +WNVN IRA + ++++ PDI+ LQE K + N P E +YH Sbjct: 1 MELL-LISWNVNGIRACVRNGFLDFLEKYKPDILALQEIKATEDNVPMEVRYYPDYHKYW 59 Query: 60 CG--QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 +K Y G A+ +K +P+ + + D D + R I A + + N Y P+ Sbjct: 60 NPAKKKGYAGTALFTKIEPLNVKFGIGEDKFDSEGRVITAEYE----KFYLVNAYFPNSQ 115 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + D + + L ++P+I GD+N+ + D NP +A FT Sbjct: 116 HGLTRL--DFKIEFDKLIHSYLNELRKKKPVILCGDFNVAHKEIDLANPKQNVKNAGFTP 173 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 + R K G+ D R Y++W Y + +N G R+D+ ++S E + Sbjct: 174 QERAWMDKFLQDGYIDTFRMFTKEGGHYTWWTYRFKARERNIGWRVDYFVVSEELKDKVK 233 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263 S+ I ++ G SDH P+ + LDI Sbjct: 234 SSWILSEVYG----SDHAPIAMVLDI 255 >gi|219685209|ref|ZP_03540029.1| exodeoxyribonuclease III [Borrelia garinii Far04] gi|219673305|gb|EED30324.1| exodeoxyribonuclease III [Borrelia garinii Far04] Length = 254 Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats. Identities = 57/260 (21%), Positives = 104/260 (40%), Gaps = 12/260 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCG 61 + + +WNVN IRA + +++E PDI+C+QETK + P + + Y + Sbjct: 1 MKLISWNVNGIRAVLKKGFLEFVQEYTPDILCVQETKALKEQLPRDLILENYYSYFSKSK 60 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 K Y+GV I SK +PI + + I + + Sbjct: 61 IKGYSGVCIYSKVKPIAVNLLGKEIFDNEGRGLIAYYDNF------VLINGYFPNSQALR 114 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + K++++ + + ++ GD+NI D +P + + +E Sbjct: 115 RRLVYKLNFLSYVENLIDSLVNGGKNVVICGDFNIAHTKIDLISPDSNRDSPGYYIEETT 174 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 + N G+ D R + Y++W Y + +N G RID+ +++ + + I Sbjct: 175 WLDRFLNKGYVDTFRIFNKEPGYYTWWSYRTRARERNMGWRIDYFIVNEFFKRNVKKSLI 234 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 K G SDH PV + L Sbjct: 235 LDKVMG----SDHCPVFLEL 250 >gi|229134542|ref|ZP_04263353.1| Exodeoxyribonuclease [Bacillus cereus BDRD-ST196] gi|228648935|gb|EEL04959.1| Exodeoxyribonuclease [Bacillus cereus BDRD-ST196] Length = 252 Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats. Identities = 67/262 (25%), Positives = 118/262 (45%), Gaps = 14/262 (5%) Query: 4 VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + +WNVN +RA +++E+N DI CLQE K + + + Sbjct: 1 MKLISWNVNGLRAVIAKGGFLEYLEESNADIFCLQEIKLQSGQIDLNP-EGYYTYWNYAV 59 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G AI +K +PI + L ++ D + R I F + Sbjct: 60 KKGYSGTAIFTKKEPISVTYGLGIEEHDQEGRVITLEFDDFYMI-----TLYTPNSKRGL 114 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + D ++ W F + + L+ ++P+IF GD N+ + D NP + F+ E R+ Sbjct: 115 ERLDYRMEWEDDFRAYIKR-LDEKKPVIFCGDLNVAHKEVDLKNPKSNRKNPGFSDEERE 173 Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 F + GF D R + YS+W Y + +KN G R+D+ ++S + A+ Sbjct: 174 KFTCVLEAGFIDTYRYLYPDQEGAYSWWSYRMGARAKNIGWRLDYFVISERLKHKITDAK 233 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I+++ G SDH PV + ++ Sbjct: 234 INSEIMG----SDHCPVELHIN 251 >gi|254522062|ref|ZP_05134117.1| exodeoxyribonuclease III [Stenotrophomonas sp. SKA14] gi|219719653|gb|EED38178.1| exodeoxyribonuclease III [Stenotrophomonas sp. SKA14] Length = 268 Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats. Identities = 66/276 (23%), Positives = 111/276 (40%), Gaps = 24/276 (8%) Query: 3 VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + ++N N IR A W + + D++C+QETK ++ + +H Sbjct: 2 TFRIISFNANGIRSAATKGFLDWFRAQDADVLCIQETKAQEDQLTDPMFRPDGHHCFYRD 61 Query: 62 ---QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 +K Y+GVAI SK +P +++T L D + R+IEA + L + + Y+P G+ Sbjct: 62 AITKKGYSGVAIYSKREPDQVITSLGWAPFDDEGRYIEARYG----NLSVVSFYIPSGS- 116 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + K ++ + + GD+NI+ D N + ++ E Sbjct: 117 SGDLRQGFKFEVMEWLRPILEEWARSGRDYVLCGDWNIVRSALDIKNWKSNQKNSGCLPE 176 Query: 179 VRQSFQKLQNMG-----------FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227 R L + DA R + T Y++W + + N G RID+ Sbjct: 177 ERDWLNALCADHGQATDVAAGRGWADAYRLLNPTGEDYTWWSNRGAARANNVGWRIDYQF 236 Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 ++P L S I R SDH P IV D+ Sbjct: 237 ITPGLRDRLRSCSIYRDER----FSDHAPFIVDYDL 268 >gi|254486587|ref|ZP_05099792.1| exodeoxyribonuclease III [Roseobacter sp. GAI101] gi|214043456|gb|EEB84094.1| exodeoxyribonuclease III [Roseobacter sp. GAI101] Length = 290 Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats. Identities = 83/264 (31%), Positives = 122/264 (46%), Gaps = 10/264 (3%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQK 63 T+ATWN+NS+R R + ++E PDI+CLQE K+ P E + Y H+ GQK Sbjct: 32 TLATWNINSVRLREPIVLKLLQEQGPDILCLQECKSPVDKIPTEAFAAAGYTHMVARGQK 91 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 YNGVAILS+ ++ GD + I N Y+P G + + Sbjct: 92 GYNGVAILSRLPLEDV-----GDQDFADLGHARHVAARLENGVTIQNFYVPAGGDVADRE 146 Query: 124 YDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180 ++K +L ++P GD NI P+ D + T EV Sbjct: 147 VNEKFGQKLDYLAGMRDWFRGDKPRKSILVGDLNIAPREDDVWGHKQLLKVVSHTPIEVE 206 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHSA 239 + + GF D R +LYS+W Y A W +KG R+DH+ +P+ ++ HS+ Sbjct: 207 KLAETQDAGGFIDITRQDIPEGNLYSWWSYRAKDWDAADKGRRLDHVWATPDISNAAHSS 266 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 R+ RGW KPSDH PV + D+ Sbjct: 267 RVLRDARGWEKPSDHAPVFATFDL 290 >gi|119476762|ref|ZP_01617072.1| exodeoxyribonuclease III [marine gamma proteobacterium HTCC2143] gi|119450018|gb|EAW31254.1| exodeoxyribonuclease III [marine gamma proteobacterium HTCC2143] Length = 257 Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats. Identities = 67/265 (25%), Positives = 111/265 (41%), Gaps = 13/265 (4%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + V + N N IRA W+ + D++C+QETK + YH Sbjct: 1 MRVISVNTNGIRAAARKGFFDWLALQSADVVCIQETKAQIDQLADPVFHPEGYHCYYFDA 60 Query: 62 -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+G A+ K +P +I + L D D Q R+I+A F + + ++Y+P G+ Sbjct: 61 EKKGYSGTALYCKKKPKKITSGLGWDPADSQGRYIQADFDG----VSVASIYVPSGS-SG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EV 179 K ++ + IF D+NI + D N ++ F E Sbjct: 116 DEAQARKEVFMTNIMDHFKAMRRKRREFIFCADWNICHREVDIKNWRGNRKNSGFLPHER 175 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 ++G+ DA R + Y++W +W+KN G R+D+ +++P + SA Sbjct: 176 AWLDSLFDDVGYADAFRVINQEEDQYTWWSNRGQAWAKNVGWRLDYQVVTPGLVDKIQSA 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIP 264 I R SDH P I+ DI Sbjct: 236 SIYKDER----FSDHAPFIMDYDID 256 >gi|77163744|ref|YP_342269.1| exodeoxyribonuclease III xth [Nitrosococcus oceani ATCC 19707] gi|76882058|gb|ABA56739.1| Exodeoxyribonuclease III [Nitrosococcus oceani ATCC 19707] Length = 237 Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats. Identities = 80/241 (33%), Positives = 129/241 (53%), Gaps = 5/241 (2%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80 + W++ + PD++ LQETK D +FP E + + YH GQK+YNGVAIL + P +I+ Sbjct: 1 MVDWLEIHQPDVLALQETKLVDDSFPQEAFKEIGYHAAYSGQKTYNGVAILCRQAPKDIL 60 Query: 81 THLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQ 140 T LP + + +R+ NLY+P+G+ + S KY K+ W+ R + + Sbjct: 61 TDLPNLVDSQRRIL-----GVTVDDIRLLNLYVPNGSEVGSKKYAYKLDWLGRIKDYLQE 115 Query: 141 RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHD 200 L LI GD+N+ P D ++P IW + R++ +++ +GF D+ R Sbjct: 116 ALVEYPKLIVLGDFNVAPADQDVHDPDIWHETILCSTPEREALKEILALGFQDSFRLFEQ 175 Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 +S+WDY ++ +N+G+RID I++S ID +PR T+PSDH PVI + Sbjct: 176 EAQSFSWWDYRGGAFRRNRGLRIDLILISKALVPKCTGCVIDKEPRRLTRPSDHAPVIAT 235 Query: 261 L 261 Sbjct: 236 F 236 >gi|317124329|ref|YP_004098441.1| exodeoxyribonuclease III Xth [Intrasporangium calvum DSM 43043] gi|315588417|gb|ADU47714.1| exodeoxyribonuclease III Xth [Intrasporangium calvum DSM 43043] Length = 294 Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats. Identities = 59/270 (21%), Positives = 109/270 (40%), Gaps = 9/270 (3%) Query: 1 MSVVTVATWNVNSIRARIHNLAA-WIKENNPDIICLQETKTEDKNFPFETLQSL--NYHI 57 M+V+ V T NVN IRA I AA WI + PD++CLQE + + ++ ++H+ Sbjct: 27 MAVMRVITANVNGIRAAIRRGAAPWISQAAPDVLCLQEVRAGETELAKALAEAGLGHWHV 86 Query: 58 ETC--GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 K GVA+ ++ + + G R++E + + + + Y+ Sbjct: 87 AHTEGTVKGRAGVAVATREPHTAVRVGVEGA-FAEAGRWVEVDVSTPAGVVTVASTYVHT 145 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 G + + +K ++ + + ++ GD N+ + D N + F Sbjct: 146 GE-AGTGRQVEKQLFLDAMTGRLERAAQAGALMVVTGDLNVAHREDDLKNWKGNLRKSGF 204 Query: 176 TLEVRQSFQKLQNMGFTDAIRA--THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 E R F + + + Y++W + ++ + G RID+ + S Sbjct: 205 LPEERDYFDRWFDELAWVDVHRVLHGPGPGPYTWWSWRGKAFDNDAGWRIDYQLASASLA 264 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 L SA + + SDH PVIV D+ Sbjct: 265 PLARSASVGRAESYAARWSDHAPVIVDYDL 294 >gi|161526271|ref|YP_001581283.1| exodeoxyribonuclease III Xth [Burkholderia multivorans ATCC 17616] gi|189349015|ref|YP_001944643.1| exodeoxyribonuclease III [Burkholderia multivorans ATCC 17616] gi|221214692|ref|ZP_03587662.1| exodeoxyribonuclease III [Burkholderia multivorans CGD1] gi|160343700|gb|ABX16786.1| exodeoxyribonuclease III Xth [Burkholderia multivorans ATCC 17616] gi|189333037|dbj|BAG42107.1| exodeoxyribonuclease III [Burkholderia multivorans ATCC 17616] gi|221165582|gb|EED98058.1| exodeoxyribonuclease III [Burkholderia multivorans CGD1] Length = 256 Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats. Identities = 63/264 (23%), Positives = 110/264 (41%), Gaps = 14/264 (5%) Query: 3 VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59 ++ V T N+N IR A W+ E N D +C+QE K + P E + + Sbjct: 1 MMRVITANLNGIRSAAKKGFFDWLGEQNADCVCVQEIKVSADDLPAEFVAPHGLKSYFHH 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G + S+ +P +++ + D + R++EA + L + ++Y+P G+ Sbjct: 61 AAKKGYSGAGLYSRREPDDVIIGFGSSEFDPEGRYVEARYG----KLSVVSVYVPSGSSG 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + L+ +I GD NI+ + D N + ++ E Sbjct: 117 DERQQA--KYRFMDEFMPHLAELKKTREVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEE 174 Query: 180 RQSFQK-LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R K ++G+ D R Y++W +++KN G RID+ + +P S S Sbjct: 175 RAWLSKLFDDVGYVDVFRTLDPRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGVASTAKS 234 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 I K SDH P+ V D Sbjct: 235 TSIFKDI----KFSDHAPLTVDYD 254 >gi|125972979|ref|YP_001036889.1| exodeoxyribonuclease III Xth [Clostridium thermocellum ATCC 27405] gi|256004776|ref|ZP_05429751.1| exodeoxyribonuclease III Xth [Clostridium thermocellum DSM 2360] gi|125713204|gb|ABN51696.1| exodeoxyribonuclease III Xth [Clostridium thermocellum ATCC 27405] gi|255991226|gb|EEU01333.1| exodeoxyribonuclease III Xth [Clostridium thermocellum DSM 2360] gi|316940785|gb|ADU74819.1| exodeoxyribonuclease III Xth [Clostridium thermocellum DSM 1313] Length = 251 Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats. Identities = 70/262 (26%), Positives = 115/262 (43%), Gaps = 13/262 (4%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + +WNVN +RA I + K+ + DI C+QE+K + E L + + Sbjct: 1 MTKLISWNVNGLRACINKGFLDYFKKADADIFCIQESKVQPGQIELE-LDGYHQYWNYAE 59 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G A+ ++ +P+ + + D+ D + R I F + + N Sbjct: 60 RKGYSGTAVFTRIKPLCVQNGIGIDEHDREGRVITLEFDNY------YLVNVYTPNAKKE 113 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + D + R L+ ++P+I GD N+ + D NP A FT E R Sbjct: 114 LERLDYRMKWEDDFRNYLVGLKAKKPVIVCGDMNVAHKEIDLKNPESNRRSAGFTDEERA 173 Query: 182 SFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 F +L N GF D R + Y++W Y ++ ++N G RID+ +S E L SA Sbjct: 174 KFTELLNAGFIDTFRFFYPDKTGAYTWWSYMFNARARNAGWRIDYFCVSEELKDRLVSAS 233 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I G SDH PV + + Sbjct: 234 IHDDVMG----SDHCPVELQIK 251 >gi|327438448|dbj|BAK14813.1| exonuclease III [Solibacillus silvestris StLB046] Length = 252 Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats. Identities = 63/261 (24%), Positives = 115/261 (44%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN IRA + + +E + D CLQETK + + L+ + + + Sbjct: 1 MKFISWNVNGIRACVNKGFLDYFREMDADFFCLQETKCQVGQIDLQ-LEGYYQYWHSAVK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G A+ +K++P+ + + + + R + + + N Y P+ + Sbjct: 60 KGYSGTAVFTKHEPLAVYYGIENEIAADEGRILTLEYE----NFYLVNTYTPNAKRDLTR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + +R + L+ ++P+I+ GD N+ D N ++ FT E R Sbjct: 116 LEERL--LWEDRMRIYLKELDAKKPVIYCGDLNVAHSELDIKNVKSNIGNSGFTYEERGK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 L GFTD R H +++W Y A +N G RID+ ++S + A I Sbjct: 174 MTDLLTSGFTDTFRHFHPDVTDHFTWWSYMAKVRERNIGWRIDYFIISDRLVEKVEEASI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 ++ G SDH P+++ L Sbjct: 234 HSEILG----SDHCPIVLKLK 250 >gi|288929660|ref|ZP_06423504.1| exodeoxyribonuclease III [Prevotella sp. oral taxon 317 str. F0108] gi|288329165|gb|EFC67752.1| exodeoxyribonuclease III [Prevotella sp. oral taxon 317 str. F0108] Length = 249 Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats. Identities = 65/257 (25%), Positives = 105/257 (40%), Gaps = 12/257 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + + K + D CLQETK + + + + Sbjct: 1 MKFISWNVNGLRAVVGKDFENTFKALDADFFCLQETKMQAGQLDLQ-FDGYDSFWNYADK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI ++++P+ + + D D + R I + Sbjct: 60 KGYSGTAIYTRHKPLNVSYGIGIDQHDHEGRVITLEMPTFFLVTVYTPNSQEELRRLDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + L+ +P+I GD N+ Q D NP +A FT E RQ Sbjct: 120 MQ------WEDDFQAYLHNLDKCKPVIVCGDMNVAHQEIDLKNPKTNRRNAGFTDEERQK 173 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 +L + GFTD R + YS+W Y + +N G RID+ ++S + + A+I Sbjct: 174 MTQLLDAGFTDTFRWKYPEEVTYSWWSYRFKARERNTGWRIDYFLVSNRLQAEVLDAKIH 233 Query: 243 TKPRGWTKPSDHTPVIV 259 T G SDH PV + Sbjct: 234 TDILG----SDHCPVEL 246 >gi|229191862|ref|ZP_04318833.1| Exodeoxyribonuclease [Bacillus cereus ATCC 10876] gi|228591624|gb|EEK49472.1| Exodeoxyribonuclease [Bacillus cereus ATCC 10876] Length = 252 Score = 181 bits (458), Expect = 1e-43, Method: Composition-based stats. Identities = 68/262 (25%), Positives = 121/262 (46%), Gaps = 14/262 (5%) Query: 4 VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + +WNVN +RA +++E++ DI CLQE K ++ L+ + Sbjct: 1 MKLISWNVNGLRAVIAKGGFLEYLEESSADIFCLQEIKLQEGQIDLN-LEGYYTYWNYAV 59 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G AI SK +P+ + L ++ D + R I F + Sbjct: 60 KKGYSGTAIFSKKEPLSVTYGLDIEEHDQEGRLITLEFEDFYMI-----TLYTPNSKRGL 114 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + D ++ W F + + L+ ++P+IF GD N+ + D NP + F+ E R+ Sbjct: 115 ERLDYRMKWEDDFRSYIKR-LDEKKPVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEERE 173 Query: 182 SFQKLQNMGFTDAIRATHDTHH-LYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 F + GFTD R + YS+W Y + +KN G R+D+ ++S + A+ Sbjct: 174 KFSCILEEGFTDTYRYLYPDQESAYSWWSYRMGARAKNIGWRLDYFVVSERMKDQITEAK 233 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I+++ G SDH PV + ++ Sbjct: 234 INSEVMG----SDHCPVELHIN 251 >gi|254166764|ref|ZP_04873618.1| exodeoxyribonuclease III [Aciduliprofundum boonei T469] gi|289596498|ref|YP_003483194.1| exodeoxyribonuclease III [Aciduliprofundum boonei T469] gi|197624374|gb|EDY36935.1| exodeoxyribonuclease III [Aciduliprofundum boonei T469] gi|289534285|gb|ADD08632.1| exodeoxyribonuclease III [Aciduliprofundum boonei T469] Length = 255 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 71/266 (26%), Positives = 120/266 (45%), Gaps = 14/266 (5%) Query: 1 MSVVTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 M ++ + +WNVN IRA + ++++ PDI+ LQE K + N P E +YH Sbjct: 1 MELL-LISWNVNGIRACVRNGFLDFLEKYKPDILALQEIKATEDNIPIEVRYYPDYHKYW 59 Query: 60 CG--QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 +K Y G A+ +K +P+ I + D D + R I A + + N Y P+ Sbjct: 60 NPAKKKGYAGTALFTKIEPLNIKFGIGEDKFDSEGRVITAEYE----KFYLVNAYFPNSQ 115 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + D + + L ++P+I GD+N+ + D NP +A FT Sbjct: 116 HGLTRL--DFKIEFDKLIHSYLNELRKKKPVILCGDFNVAHKEIDLANPKQNVKNAGFTP 173 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 + R + G+ D R Y++W Y + +N G R+D+ ++S E + Sbjct: 174 QERAWMDEFLQDGYIDTFRMFTKEGGHYTWWTYRFKARERNIGWRVDYFVVSEELKDKVK 233 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263 S+ I ++ G SDH P+ + LDI Sbjct: 234 SSWILSEVYG----SDHAPIAMVLDI 255 >gi|149180849|ref|ZP_01859351.1| exodeoxyribonuclease [Bacillus sp. SG-1] gi|148851368|gb|EDL65516.1| exodeoxyribonuclease [Bacillus sp. SG-1] Length = 253 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 70/261 (26%), Positives = 121/261 (46%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN IRA + + K+ + DI C+QE+K ++ + L++ + + + Sbjct: 1 MKIVSWNVNGIRACVKKGFMDFFKDVDADIFCIQESKLQEGQIQLD-LENYHQYWNYAER 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G A+ +K +P+ + + DD + + R I F + N+Y P+ S Sbjct: 60 KGYSGTAVFTKQEPLSVSYGIGEDDDEPEGRCITLEFE----DFYLLNVYTPNSKRDLSR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 D +R + L+ +P+I+ GD N+ D NP ++ FT E R+ Sbjct: 116 LEDRLHWE--ERVRAYIKELDEIKPVIYCGDLNVAHNEIDLRNPKSNHGNSGFTTEEREK 173 Query: 183 FQKLQNMGFTDAIRATHDTHHL-YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 L N GF D+ R + Y++W Y + +N G RID+ ++S L A + Sbjct: 174 MSTLLNEGFVDSFRHLYPEKDQSYTWWSYMSKVRERNIGWRIDYFIVSDRLKDSLKDAGM 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 T G SDH PV + +D Sbjct: 234 HTDVLG----SDHCPVYIEID 250 >gi|313892072|ref|ZP_07825670.1| exodeoxyribonuclease III [Dialister microaerophilus UPII 345-E] gi|313119524|gb|EFR42718.1| exodeoxyribonuclease III [Dialister microaerophilus UPII 345-E] Length = 254 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 72/264 (27%), Positives = 121/264 (45%), Gaps = 13/264 (4%) Query: 1 MSVVTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 M+ + +WNVN +RA I K N D CLQETK + + + + Sbjct: 1 MNNLKYISWNVNGLRACIKKGFLDSFKNLNADCFCLQETKLQPHQIELN-IPGYYQYWNS 59 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G A+ +K +PI + + ++ D + R I A F + + + Sbjct: 60 AIKKGYSGTALFTKIKPISVSYGMNIEEHDQEGRLITAEFENHFLVV-----CYTPNSQR 114 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + + ++ W F + + L +P+I GD N+ + D NP +A FT + Sbjct: 115 QLARLEYRMKWENDFKNYLLK-LTESKPVILCGDLNVAHKEIDLANPSSNHKNAGFTDDE 173 Query: 180 RQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R+ F L GFTD R + YS+W Y+A S +N G RID+ ++S + + + Sbjct: 174 RKKFSTLLENGFTDTFRYLYPDKKDAYSWWSYFAKSRERNIGWRIDYFLVSDKLKNKIKD 233 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 A+I + +G SDH PV ++ D Sbjct: 234 AKIHPEIQG----SDHCPVELTFD 253 >gi|49478354|ref|YP_037804.1| exodeoxyribonuclease III [Bacillus thuringiensis serovar konkukian str. 97-27] gi|301055229|ref|YP_003793440.1| exodeoxyribonuclease III [Bacillus anthracis CI] gi|49329910|gb|AAT60556.1| exodeoxyribonuclease III [Bacillus thuringiensis serovar konkukian str. 97-27] gi|300377398|gb|ADK06302.1| exodeoxyribonuclease III [Bacillus cereus biovar anthracis str. CI] Length = 252 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 67/262 (25%), Positives = 123/262 (46%), Gaps = 14/262 (5%) Query: 4 VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + +WNVN +RA +++E+N DI C+QE K ++ + + Sbjct: 1 MKFISWNVNGLRAVIAKGGFLEYLEESNADIFCVQEIKLQEGQIDLNV-EGYYTYWNYAV 59 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G AI SK +P+ + L ++ D + R I F I LY P+ + Sbjct: 60 KKGYSGTAIFSKKEPLSVTYGLGIEEHDQEGRVITLEFE----DFYIITLYTPN-SKRGL 114 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + + ++ W F + + L+ ++ ++F GD N+ + D NP + F+ E R+ Sbjct: 115 ERLEYRMKWEDDFRAYIKR-LDEKKSVVFCGDLNVAHKEIDLKNPKSNRKNPGFSDEERE 173 Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 F + GF D R + YS+W Y + +KN G R+D+ ++S + +A+ Sbjct: 174 KFTCILEEGFIDTYRYLYPDQEGAYSWWSYRMGARAKNIGWRLDYFVVSERMKDQITAAK 233 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I+++ G SDH PV + ++ Sbjct: 234 INSEVMG----SDHCPVELHIN 251 >gi|158298437|ref|XP_318609.4| AGAP009587-PA [Anopheles gambiae str. PEST] gi|157013880|gb|EAA14571.4| AGAP009587-PA [Anopheles gambiae str. PEST] Length = 606 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 70/262 (26%), Positives = 113/262 (43%), Gaps = 13/262 (4%) Query: 5 TVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET-CGQ 62 +++WNV +R+ + +I+ PDI+C+QETK + P E YH C Sbjct: 355 KISSWNVAGLRSWVGKGGLEFIEHEKPDILCVQETKCTEDQMPDEARHIKGYHPYWLCKP 414 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 + GVAI SK P + L ++ D R + A + + +Y+P+ T Sbjct: 415 GGHAGVAIYSKKMPFHVAYGLGDEEQDQDGRLLTAEYE----KFYLVCVYVPNAGRKLVT 470 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + L+ ++P+I GD N+ + D NP + +A FT E R+ Sbjct: 471 LPKRLRWN--EKFHQYLRDLDAKKPVILCGDMNVAHEEIDLANPKTNKKNAGFTPEEREG 528 Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +L + GF D R + Y+FW Y + +KN G R+D+ + S + I Sbjct: 529 MTELLSYGFVDTFRKLYPDRTGAYTFWTYMGGARAKNVGWRLDYFITSERLAGKVTDNVI 588 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 R SDH PV + L+I Sbjct: 589 ----RSQVFGSDHCPVTLFLNI 606 >gi|45358575|ref|NP_988132.1| exodeoxyribonuclease III Xth [Methanococcus maripaludis S2] gi|44921333|emb|CAF30568.1| exonuclease III [Methanococcus maripaludis S2] Length = 249 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 70/260 (26%), Positives = 119/260 (45%), Gaps = 12/260 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN IRA + +++ +PDI+C+QETK + L + + Sbjct: 1 MKMLSWNVNGIRACLKNGFMNFLERESPDIMCIQETKVQSGQVQL-GLDGYFQYWNYAER 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +P ++ + + + + R I F + T Sbjct: 60 KGYSGTAIFTKIKPNNVILGMENSEHNNEGRVITLEFDE-----YYLVNVYTPNSQRGLT 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + + W + FL + LE ++P++F GD N+ + D NP +A FT E R Sbjct: 115 RLEYRQKWDEDFLSYIKT-LETKKPVVFCGDLNVAHKEIDLKNPKTNVKNAGFTPEERNG 173 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F + N GF D R ++ YS+W Y ++ ++N G RID+ +S + L A I Sbjct: 174 FDNIVNSGFLDTFREFNNEPDNYSWWSYRFNARARNIGWRIDYFCISKSLRNNLKDAYIM 233 Query: 243 TKPRGWTKPSDHTPVIVSLD 262 + G SDH PV + + Sbjct: 234 PEVMG----SDHCPVGIIFE 249 >gi|224418520|ref|ZP_03656526.1| exodeoxyribonuclease LexA [Helicobacter canadensis MIT 98-5491] gi|253826925|ref|ZP_04869810.1| exodeoxyribonuclease LexA [Helicobacter canadensis MIT 98-5491] gi|313142047|ref|ZP_07804240.1| exodeoxyribonuclease LexA [Helicobacter canadensis MIT 98-5491] gi|253510331|gb|EES88990.1| exodeoxyribonuclease LexA [Helicobacter canadensis MIT 98-5491] gi|313131078|gb|EFR48695.1| exodeoxyribonuclease LexA [Helicobacter canadensis MIT 98-5491] Length = 252 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 73/261 (27%), Positives = 119/261 (45%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + + N D+ C+QE+K + + F+ + + + + Sbjct: 1 MKLISWNVNGLRACMNKGFMDFFETVNADVFCIQESKMQREQATFD-FPNYEEYWNSAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+GVAI SK +P+ + + D + R I A + + N+Y P+ Sbjct: 60 KGYSGVAIFSKTKPLSVAYDMGIAHHDKEGRIICAEYK----DFYLVNVYTPNSKRELER 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + R + LE +P+I GD N+ Q D NP +A FT E R+ Sbjct: 116 L--SYRMEWEDDFRAYLKNLEKTKPVIVCGDLNVAHQEIDLKNPKTNRRNAGFTDEEREK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +L + GFTD R + T YS+W Y + N G RID+ + S S L A+I Sbjct: 174 MTQLLDSGFTDTFRHFYPTLEGAYSWWSYMGKARENNTGWRIDYFLCSKALDSKLLDAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 + G SDH PV + ++ Sbjct: 234 YPEVFG----SDHCPVGLEIN 250 >gi|221201880|ref|ZP_03574917.1| exodeoxyribonuclease III [Burkholderia multivorans CGD2M] gi|221207614|ref|ZP_03580622.1| exodeoxyribonuclease III [Burkholderia multivorans CGD2] gi|221172460|gb|EEE04899.1| exodeoxyribonuclease III [Burkholderia multivorans CGD2] gi|221178300|gb|EEE10710.1| exodeoxyribonuclease III [Burkholderia multivorans CGD2M] Length = 256 Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats. Identities = 62/264 (23%), Positives = 110/264 (41%), Gaps = 14/264 (5%) Query: 3 VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59 ++ V T N+N IR A W+ E N D +C+QE K + P E + + Sbjct: 1 MMRVITANLNGIRSAAKKGFFDWLGEQNADCVCVQEIKVSADDLPAEFVAPHGLKSYFHH 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G + S+ +P +++ + D + R++EA + L + ++Y+P G+ Sbjct: 61 AAKKGYSGAGLYSRREPDDVIIGFGSSEFDPEGRYVEARYG----KLSVVSVYVPSGSSG 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + L+ +I GD NI+ + D N + ++ E Sbjct: 117 DERQQA--KYRFMDEFMPHLAALKKTREVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEE 174 Query: 180 RQSFQK-LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R K ++G+ D R Y++W +++KN G RID+ + +P + S Sbjct: 175 RAWLSKLFDDVGYVDVFRTLDPRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGVAATAKS 234 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 I K SDH P+ V D Sbjct: 235 TSIFKDI----KFSDHAPLTVDYD 254 >gi|302560173|ref|ZP_07312515.1| exodeoxyribonuclease III [Streptomyces griseoflavus Tu4000] gi|302477791|gb|EFL40884.1| exodeoxyribonuclease III [Streptomyces griseoflavus Tu4000] Length = 276 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 55/273 (20%), Positives = 100/273 (36%), Gaps = 12/273 (4%) Query: 1 MS----VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55 MS ++TV + NVN +RA W+ + D++CLQE + E K P + + Sbjct: 1 MSYRSLMLTVTSVNVNGLRAAAKKGFVEWLAGTSADVLCLQEVRAEAKQLPETVREPEGW 60 Query: 56 HIETCGQ--KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 H+ K GV++ ++ +P + ++ D R++E T + Sbjct: 61 HVVHAPAAAKGRAGVSLYTRREPDRVRVGFGSEEFDTAGRYVEVDLPGVTVA-SLYLPSG 119 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 G K ++ + ++ GD+NI + D N + Sbjct: 120 EVGTERQDEKMRFMGEFLAHLKGLRERAAADGREVVVCGDWNIAHEKADLKNWRGNTKSS 179 Query: 174 CFTLEVRQSFQKLQN----MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 F E R+ ++ + D YS+W Y ++ + G RID + + Sbjct: 180 GFLPEEREWLSRVLDPADGGYVDVVRALHPDVDGPYSWWSYRGRAFDNDTGWRIDLAVAT 239 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 P A ++ + SDH PV V + Sbjct: 240 PGLAGRAVKAYVERAATHAERWSDHAPVTVVFE 272 >gi|170703197|ref|ZP_02894004.1| exodeoxyribonuclease III Xth [Burkholderia ambifaria IOP40-10] gi|170131894|gb|EDT00415.1| exodeoxyribonuclease III Xth [Burkholderia ambifaria IOP40-10] Length = 257 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 59/264 (22%), Positives = 112/264 (42%), Gaps = 14/264 (5%) Query: 3 VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59 ++ V T N+N IR A W+ E N D +C+QE K + P + ++ + + Sbjct: 1 MMRVITANLNGIRSAAKKGFFEWLGEQNADCVCVQEIKVSADDLPADFVEPHGFRSYFHH 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G + S+++P +++ + D + R++EA + L + ++Y+P G+ Sbjct: 61 AEKKGYSGAGVYSRHEPDDVIIGFGSSEFDPEGRYVEARYG----KLSVVSVYVPSGSSG 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + L+ + +I GD NI+ + D N + ++ E Sbjct: 117 EERQQA--KYRFMDEFMPHLAELKSKREVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEE 174 Query: 180 RQSFQK-LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R + ++G+ D R Y++W +++KN G RID+ + +P Sbjct: 175 RAWLTQLFDDVGYVDVFRTLDPRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGVAGTAKR 234 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 I K SDH P+ V D Sbjct: 235 TSIFKDI----KFSDHAPLTVDYD 254 >gi|187251652|ref|YP_001876134.1| exodeoxyribonuclease III Xth [Elusimicrobium minutum Pei191] gi|186971812|gb|ACC98797.1| Exodeoxyribonuclease III Xth [Elusimicrobium minutum Pei191] Length = 255 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 63/262 (24%), Positives = 111/262 (42%), Gaps = 13/262 (4%) Query: 5 TVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG-- 61 +WNVN +RA W + +PDI+ LQETK + + YH Sbjct: 4 RFISWNVNGLRAVAKKGFMEWFTKESPDILALQETKASPEQLEGGLKNPIGYHSYFSTAE 63 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+GVA+ SK +P+ + + +D + R T + + N+Y P+G Sbjct: 64 RKGYSGVAVYSKEEPLSVSESIGNSTMDGEGR----TLVLEFKNFYFINIYFPNGGQGEH 119 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + +Q+L ++ +I GD N + D P E + F + R Sbjct: 120 RI--EYKLRFYNEFLKLTQKLMKQKTVIVCGDVNTAHKETDLARPKENEGNTGFLPKERA 177 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 K G TD R Y++WDY + +N G RID+ M+ + + + ++ + Sbjct: 178 WLDKFFENGLTDTFRLFTKDGGHYTWWDYKTKARERNVGWRIDYFMIDTLSKNKVKNSYM 237 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 + +G SDH P+ + +++ Sbjct: 238 LPEVQG----SDHCPIALEINL 255 >gi|218898840|ref|YP_002447251.1| exodeoxyribonuclease III [Bacillus cereus G9842] gi|218542018|gb|ACK94412.1| exodeoxyribonuclease III [Bacillus cereus G9842] Length = 252 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 68/262 (25%), Positives = 120/262 (45%), Gaps = 14/262 (5%) Query: 4 VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + +WNVN +RA +++E+N DI CLQE K + L+ + Sbjct: 1 MKLISWNVNGLRAVIAKGGFLEYLEESNADIFCLQEIKVQSGQIDLN-LEGYYTYWNYAV 59 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G AI +K +P+ + L ++ D + R I F + Sbjct: 60 KKGYSGTAIFTKKEPLSVTYGLEIEEHDQEGRLITLEFEDFYMI-----TLYTPNSKRGL 114 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + D ++ W F + + L+ ++P+IF GD N+ + D NP + F+ E R+ Sbjct: 115 ERLDYRMKWEDDFRSYIKR-LDEKKPVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEERE 173 Query: 182 SFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 F + GF D R + D YS+W Y + +KN G R+D+ ++S + A+ Sbjct: 174 KFTCILEEGFIDTYRYLYSDQEGAYSWWSYRMGARAKNIGWRLDYFVVSERMKDQITEAK 233 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I+++ G SDH PV + ++ Sbjct: 234 INSEVMG----SDHCPVELHIN 251 >gi|281417190|ref|ZP_06248210.1| exodeoxyribonuclease III Xth [Clostridium thermocellum JW20] gi|281408592|gb|EFB38850.1| exodeoxyribonuclease III Xth [Clostridium thermocellum JW20] Length = 251 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 70/262 (26%), Positives = 115/262 (43%), Gaps = 13/262 (4%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + +WNVN +RA I + K+ + DI C+QE+K + E L + + Sbjct: 1 MTKLISWNVNGLRACINKGFLDYFKKADADIFCIQESKVQPGQIELE-LDGYHQYWNYAE 59 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G A+ ++ +P+ + + D+ D + R I F + + N Sbjct: 60 RKGYSGTAVFTRIKPLYVQNGIGIDEHDREGRVITLEFDNY------YLVNVYTPNAKKE 113 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + D + R L+ ++P+I GD N+ + D NP A FT E R Sbjct: 114 LERLDYRMKWEDDFRNYLVGLKAKKPVIVCGDMNVAHKEIDLKNPESNRRSAGFTDEERA 173 Query: 182 SFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 F +L N GF D R + Y++W Y ++ ++N G RID+ +S E L SA Sbjct: 174 KFTELLNAGFIDTFRFFYPDKTGAYTWWSYMFNARARNAGWRIDYFCVSEELKDRLVSAS 233 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I G SDH PV + + Sbjct: 234 IHDDVMG----SDHCPVELQIK 251 >gi|320094719|ref|ZP_08026473.1| exodeoxyribonuclease III [Actinomyces sp. oral taxon 178 str. F0338] gi|319978361|gb|EFW09950.1| exodeoxyribonuclease III [Actinomyces sp. oral taxon 178 str. F0338] Length = 274 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 79/275 (28%), Positives = 126/275 (45%), Gaps = 21/275 (7%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSIRAR A+++ + D++ +QETK FP E + YH+ G Sbjct: 1 MRIATWNVNSIRARAARATAFLERSGTDVLAMQETKCTPAQFPAEAFEEAGYHVAVHGLN 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL----------------R 107 +NGVA+ S++ + + H PG +EA + Sbjct: 61 QWNGVAVASRHPILRVHDHFPGQPAFGDPAVVEARALGVVIDVSGALEGAPGSPAPAELT 120 Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEP--LIFAGDYNIIPQPHDCYN 165 + +LY+P+G + Y K+ W+ A L+ + + GD+N+ PQ D ++ Sbjct: 121 VWSLYVPNGRELDHPHYAYKLEWLAALRAQARGWLDADPAALVALVGDWNVAPQDQDVWD 180 Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225 +E + R++F G+ +A RA Y++WDY + KN+G+RID Sbjct: 181 MAAFEGATHVSAPEREAFAAFAEDGWIEATRA---RTTNYTYWDYQRLRFPKNEGMRIDF 237 Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 SP + + SARID R SDH PVI+ Sbjct: 238 AYASPALEARITSARIDRDERKGKGASDHVPVILD 272 >gi|325970995|ref|YP_004247186.1| exodeoxyribonuclease III Xth [Spirochaeta sp. Buddy] gi|324026233|gb|ADY12992.1| exodeoxyribonuclease III Xth [Spirochaeta sp. Buddy] Length = 250 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 68/261 (26%), Positives = 113/261 (43%), Gaps = 14/261 (5%) Query: 4 VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + ++K++N DI CLQETK ++ + + + + Sbjct: 1 MKLVSWNVNGLRAIQKKGFDEYLKQSNADIFCLQETKLQEDQISL-VTEGYHTYWSFAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G A+ SK +P+ + + + N T Sbjct: 60 KGYSGTALFSKQEPVSVQRGIGHPLDNEGRTVTAEFEQFYVVCCYTPNSQEALARLDTRM 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 +D R L +P+I GD N+ Q D +P E +A +++E R Sbjct: 120 DWD-------EAFRSYVCSLASMKPVIICGDLNVAHQSIDLRHPKANERNAGYSIEERNQ 172 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F L + GF D R + +YS+W Y + N G RID+ ++S E + + I Sbjct: 173 FTSLLDAGFIDTFRYLYPNREGIYSWWSYRFKARENNAGWRIDYWLVSEELRQSILDSTI 232 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 DT+ +G SDH PVI+ L+ Sbjct: 233 DTETQG----SDHAPVILYLN 249 >gi|297539760|ref|YP_003675529.1| exodeoxyribonuclease III Xth [Methylotenera sp. 301] gi|297259107|gb|ADI30952.1| exodeoxyribonuclease III Xth [Methylotenera sp. 301] Length = 262 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 62/264 (23%), Positives = 107/264 (40%), Gaps = 10/264 (3%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETC 60 + + + N+N IR+ + W++ N D++C+QE K + + E L Y+ Sbjct: 1 MKIISLNLNGIRSATNKGVQTWLQTQNADVVCMQEIKAQQADMTPEMLNPAGYYGYFHYA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GV I K +P ++ L G + VQ E + Sbjct: 61 EKKGYSGVGIYCKAKPDAVIEGLGGSNDGVQDIDSEGRYLECQFGNLSVISLYLPSGSSG 120 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K S + RF+ ++ +I GD+NI + D N + ++ F E R Sbjct: 121 EERQAFKFSVMTRFMLHMQALIKSGREIIICGDWNIAHKEADLKNYKGNKKNSGFLPEER 180 Query: 181 QSFQKLQNM-GFTDAIRATHDT--HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 L + G+ D R H Y++W +++KN G RID+ + +P + Sbjct: 181 AWLTTLFDEVGWVDVYRTLHPNTTDECYTWWSNRGQAYAKNVGWRIDYQIATPAIAAKAV 240 Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261 S + R SDH P+IV Sbjct: 241 STSVYKAER----FSDHAPLIVEY 260 >gi|290959716|ref|YP_003490898.1| exodeoxyribonuclease III [Streptomyces scabiei 87.22] gi|260649242|emb|CBG72356.1| putative exodeoxyribonuclease III [Streptomyces scabiei 87.22] Length = 267 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 57/266 (21%), Positives = 102/266 (38%), Gaps = 8/266 (3%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++TV + NVN +RA W+ + D++CLQE + E + P Q +H+ Sbjct: 1 MLTVTSVNVNGLRAAAKKGFVEWLAGTSADVVCLQEVRAEPEQLPEGVRQPEGWHVVHAP 60 Query: 62 Q--KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 K GV++ S+ +P + + D R++EA T + G Sbjct: 61 AAAKGRAGVSLYSRREPDRVRIGFGSAEFDGSGRYVEADLPGVTVA-SLYLPSGEVGTER 119 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K ++ + ++ GD+NI Q D N + ++ F E Sbjct: 120 QDEKVRFMGEFLPYLKDLRERAAADGREVVVCGDWNIAHQQADLKNWRANQKNSGFLPEE 179 Query: 180 RQSFQKLQNM----GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 R+ ++ + + YS+W Y ++ ++ G RID + +P S Sbjct: 180 REWLGRVLDEGDGGYVDVVRALHPEVEGPYSWWSYRGRAFERDTGWRIDLAVATPGLASK 239 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 A ++ + SDH PV V L Sbjct: 240 AVKAFVERAASHDERWSDHAPVTVVL 265 >gi|258546221|ref|ZP_05706455.1| exodeoxyribonuclease III [Cardiobacterium hominis ATCC 15826] gi|258518646|gb|EEV87505.1| exodeoxyribonuclease III [Cardiobacterium hominis ATCC 15826] Length = 253 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 87/259 (33%), Positives = 130/259 (50%), Gaps = 7/259 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + +WNVNS+ R+ ++ ++KE PDI+ LQE K D L + YH+E+ GQK Sbjct: 1 MNITSWNVNSLNVRLPHVLQYLKETAPDILGLQELKQTDAAIDRTALAAAGYHLESHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGVA+L++ ++V +PG + +R+ NLY+P+G + K Sbjct: 61 TYNGVALLAREALTDVVRGIPGYADEQARAIAANVGD-----VRVLNLYVPNGKAVGDEK 115 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ W+ R+ L+ GDYNI P D ++P W + + RQ+ Sbjct: 116 YTYKLHWLDAVTRYIDDLKREHPKLVIIGDYNIAPADLDVHDPDKWRDQILCSAPERQAL 175 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 L +GF DA R H +S+WDY +N G+RID + S T L A IDT Sbjct: 176 ANLLALGFKDAYRTLHPDTQQFSWWDYRMGGLRRNIGLRIDLTLTSDALT--LADAGIDT 233 Query: 244 KPRGWTKPSDHTPVIVSLD 262 PR W +PSDH P V + Sbjct: 234 APRHWERPSDHAPAWVKIK 252 >gi|283796572|ref|ZP_06345725.1| exodeoxyribonuclease III [Clostridium sp. M62/1] gi|291075985|gb|EFE13349.1| exodeoxyribonuclease III [Clostridium sp. M62/1] gi|295092540|emb|CBK78647.1| exodeoxyribonuclease III [Clostridium cf. saccharolyticum K10] gi|295115277|emb|CBL36124.1| exodeoxyribonuclease III [butyrate-producing bacterium SM4/1] Length = 251 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 75/264 (28%), Positives = 117/264 (44%), Gaps = 15/264 (5%) Query: 1 MSVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 M + +WNVN +RA + ++ + DI C+QE+K + + + + Sbjct: 1 MKKM--ISWNVNGLRACVGKGFLDVFRKLDADIFCIQESKLQAGQIDLD-IPGYYQYWSY 57 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G A+ SK +PI +V L D D + R I A + + Sbjct: 58 ADKKGYSGTALFSKEEPISVVYGLGIDAHDHEGRVITAEYED-----YYVLTCYTPNSQN 112 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + ++ W FL + + LE ++P+IF GD N+ + D NP +A FT E Sbjct: 113 ELARLPYRMEWEDAFLAYLKK-LEEKKPVIFCGDLNVAHREIDLKNPRTNRKNAGFTDEE 171 Query: 180 RQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R F L + GF D R + +YS+W Y + KN G RID+ +S L S Sbjct: 172 RGKFSALLDAGFIDTYRHFYPDTEGVYSWWSYRFKAREKNAGWRIDYFCVSESLEDRLVS 231 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 A I T+ G SDH PV + + Sbjct: 232 ASIHTEIMG----SDHCPVELVIK 251 >gi|163854727|ref|YP_001629025.1| putative endonuclease [Bordetella petrii DSM 12804] gi|163258455|emb|CAP40754.1| putative endonuclease [Bordetella petrii] Length = 262 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 60/264 (22%), Positives = 108/264 (40%), Gaps = 9/264 (3%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59 ++ + + N+N IR+ L W++ ++ D++CLQE K D + + Y H Sbjct: 1 MLRITSINLNGIRSAFRKGLQPWMQTHSADVLCLQEIKISDADLTDDLRHPPGYTGHFCH 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GV + + + L ++ D + R I A + N + G+ Sbjct: 61 AIKKGYSGVGMYLRNTAERVQAGLNCEEFDAEGRIIRADWK-NLSVISAYLPSGSSGDER 119 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 KY + + + + GD+NI + D N + ++ F E Sbjct: 120 QQAKYRFLDVFGPWLDELMREHKKTGREFVICGDWNIAHKEIDLKNWKSNQKNSGFLPEE 179 Query: 180 RQSFQKLQN-MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R ++ + GF D R + Y++W +W+KN G RID+ + +P + S Sbjct: 180 RAWLTEVFDKRGFVDVFRRLDERPEQYTWWSNRGQAWAKNVGWRIDYQIATPGLAARARS 239 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 A I R SDH P+ + D Sbjct: 240 ASIYKDER----FSDHAPLTIDYD 259 >gi|229824704|ref|ZP_04450773.1| hypothetical protein GCWU000182_00052 [Abiotrophia defectiva ATCC 49176] gi|229791033|gb|EEP27147.1| hypothetical protein GCWU000182_00052 [Abiotrophia defectiva ATCC 49176] Length = 250 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 64/261 (24%), Positives = 111/261 (42%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + + + + D LQE K + + L + + + Sbjct: 1 MKYISWNVNGLRACLTKGFMDFFNKVDADAFGLQEIKLSEGQLELD-LPGYHKYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G A+ +K +PI + + D+ D + R I A + + + + Sbjct: 60 KGYSGTALFTKKEPINVTYDMGIDEHDHEGRVITAEYEDHFFVVCYTPNAKQELERLDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + R +L+ +P+I GD N+ + D NP +A FT E R Sbjct: 120 M------VWEDDFRAYLNKLKESKPVILCGDLNVAHKEIDLKNPKTNRRNAGFTDEERGK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +L + G+ D R + ++YS+W Y + KN G RID+ + S + L A+I Sbjct: 174 MTELLDAGYIDTFRFFYPELENVYSWWSYRFKAREKNTGWRIDYFITSDDFKDRLKDAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 ++ G SDH PV + D Sbjct: 234 HSEILG----SDHCPVELDFD 250 >gi|75759849|ref|ZP_00739924.1| Exodeoxyribonuclease III [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228902244|ref|ZP_04066404.1| Exodeoxyribonuclease [Bacillus thuringiensis IBL 4222] gi|228966664|ref|ZP_04127710.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar sotto str. T04001] gi|74492665|gb|EAO55806.1| Exodeoxyribonuclease III [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228793040|gb|EEM40596.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar sotto str. T04001] gi|228857359|gb|EEN01859.1| Exodeoxyribonuclease [Bacillus thuringiensis IBL 4222] Length = 252 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 68/262 (25%), Positives = 120/262 (45%), Gaps = 14/262 (5%) Query: 4 VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + +WNVN +RA +++E+N DI CLQE K + L+ + Sbjct: 1 MKLISWNVNGLRAVIAKGGFLEYLEESNADIFCLQEIKLQSGQIDLN-LEGYYTYWNYAV 59 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G AI +K +P+ + L ++ D + R I F + Sbjct: 60 KKGYSGTAIFTKKEPLSVTYGLEIEEHDQEGRLITLEFEDFYMI-----TLYTPNSKRGL 114 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + D ++ W F + + L+ ++P+IF GD N+ + D NP + F+ E R+ Sbjct: 115 ERLDYRMKWEDDFRSYIKR-LDEKKPVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEERE 173 Query: 182 SFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 F + GF D R + D YS+W Y + +KN G R+D+ ++S + A+ Sbjct: 174 KFTCILEEGFIDTYRYLYSDQEGAYSWWSYRMGARAKNIGWRLDYFVVSERMKDQITEAK 233 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I+++ G SDH PV + ++ Sbjct: 234 INSEVMG----SDHCPVELHIN 251 >gi|331702430|ref|YP_004399389.1| exodeoxyribonuclease III Xth [Lactobacillus buchneri NRRL B-30929] gi|329129773|gb|AEB74326.1| exodeoxyribonuclease III Xth [Lactobacillus buchneri NRRL B-30929] Length = 256 Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats. Identities = 68/265 (25%), Positives = 116/265 (43%), Gaps = 13/265 (4%) Query: 4 VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + + A ++ + D C+QETK ++ + L + + Sbjct: 1 MKFISWNVNGLRAAVKHDFAETFQQLDADFFCIQETKMQEGQLELD-LPGYQQYFNYAER 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K+ P+ + + D+ D + R I + + + G + Sbjct: 60 KGYSGTAIFTKHAPMHVTYGINSDEFDHEGRAITLEYP---DFYLVTSYVPNSGAGLKRL 116 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + L+ ++P+I GD N+ + + NP ++A FT E RQ Sbjct: 117 DFR---MGWNKAFYQYLTELDAKKPVILCGDLNVAHKEIELKNPQSNHHNAGFTDEERQD 173 Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F KL GF D R + +YS+W Y S +N G RID+ + S + ++I Sbjct: 174 FTKLLKAGFMDTFRHFYPDQTDIYSWWSYRFHSRDRNAGWRIDYFVASNRLADQIEDSKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLDIPEP 266 T G SDH PV + +P P Sbjct: 234 LTDVFG----SDHCPVELDTKLPRP 254 >gi|113866254|ref|YP_724743.1| exodeoxyribonuclease III [Ralstonia eutropha H16] gi|113525030|emb|CAJ91375.1| Exodeoxyribonuclease III [Ralstonia eutropha H16] Length = 258 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 61/266 (22%), Positives = 117/266 (43%), Gaps = 13/266 (4%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IET 59 ++ + + N+N IR+ W+ + + D++C+QE K ++ + L YH Sbjct: 1 MLRIISANLNGIRSASKKGFFDWMGKQDADMVCVQELKAQEADMTEAFLAPHGYHGFFHY 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GV + ++++P +VT + D + R++E + L + ++Y+P G+ Sbjct: 61 AEKKGYSGVGLYTRHKPERVVTGFGNSEFDSEGRYVE----VQYPHLAVISVYVPSGSSG 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K +++ FL Q ++ GD NI + D N ++ F E Sbjct: 117 EERQLA-KFRFMEAFLPHLLQLKASGREIVLCGDVNIAHKEIDIKNWKGNLKNSGFLPEE 175 Query: 180 RQSFQKLQN-MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R +L + G+ D R Y++W +++KN G RID+ + +P+ Sbjct: 176 RAWIGELFDVHGYVDVFRKLDPRPEQYTWWSNRGQAYAKNVGWRIDYHLATPKIADTARL 235 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIP 264 I K SDH P+ + D P Sbjct: 236 CSIYKD----EKFSDHAPLSIDYDYP 257 >gi|66817330|ref|XP_642518.1| hypothetical protein DDB_G0277701 [Dictyostelium discoideum AX4] gi|161784257|sp|P51173|APEA_DICDI RecName: Full=DNA-(apurinic or apyrimidinic site) lyase; AltName: Full=Class II apurinic/apyrimidinic(AP)-endonuclease gi|60470608|gb|EAL68586.1| hypothetical protein DDB_G0277701 [Dictyostelium discoideum AX4] Length = 361 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 69/263 (26%), Positives = 116/263 (44%), Gaps = 10/263 (3%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFE-TLQSLNYHIETCG 61 + + +WNV ++ + ++++ NPD++CLQETK N + + YH Sbjct: 105 MKIISWNVAGFKSVLSKGFTEYVEKENPDVLCLQETKINPSNIKKDQMPKGYEYHFIEAD 164 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 QK ++G +L+K +P I + D + R I + I N Y+P+ Sbjct: 165 QKGHHGTGVLTKKKPNAITFGIGIAKHDNEGRVITLEYD----QFYIVNTYIPNAGTRGL 220 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + D +I + ++L +P+I+ GD N+ D NP + A FT+E R Sbjct: 221 QRLDYRIKEWDVDFQAYLEKLNATKPIIWCGDLNVAHTEIDLKNPKTNKKSAGFTIEERT 280 Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 SF G+ D+ R + Y+FW Y SKN G R+D+ ++S + Sbjct: 281 SFSNFLEKGYVDSYRHFNPGKEGSYTFWSYLGGGRSKNVGWRLDYFVVSKRLMDSIK--- 337 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263 I R SDH P+ V +D+ Sbjct: 338 ISPFHRTSVMGSDHCPIGVVVDL 360 >gi|317010103|gb|ADU80683.1| exodeoxyribonuclease III [Helicobacter pylori India7] Length = 250 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 73/260 (28%), Positives = 119/260 (45%), Gaps = 13/260 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + + D+ C+QE+K + + FE + + Sbjct: 1 MKLVSWNVNGLRACMTKGFMDFFNSVDADVFCIQESKMQQEQNTFE-FKGYFDFWNCAIK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+GV SK +P+ + + ++ D + R + F + + N+Y P+ S Sbjct: 60 KGYSGVVTFSKKEPLSVSYGINIEEHDKEGRVVTCEFE----SFYLVNVYTPNSQQALSR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + ++SW F +F LEL++P+I GD N+ D NP +A F+ E R Sbjct: 116 -LNYRMSWEVEFKKFLKA-LELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L N GF D R + Y++W Y + KN G RID+ + S + L A I Sbjct: 174 FSELLNAGFIDTFRYFYPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALI 233 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 G SDH PV + L Sbjct: 234 YKDILG----SDHCPVGLEL 249 >gi|297380626|gb|ADI35513.1| exodeoxyribonuclease III [Helicobacter pylori v225d] Length = 250 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 70/260 (26%), Positives = 116/260 (44%), Gaps = 13/260 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + + DI C+QE+K + + FE + + Sbjct: 1 MKLISWNVNGLRACMTKGFMDFFNSVDADIFCIQESKMQQEQNTFE-FKGYFDFWNCAIK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+GV +K +P+ + + ++ D + R + F + + N+Y+P+ S Sbjct: 60 KGYSGVVTFTKKEPLSVSYGINIEEHDKEGRVVTCEFEL----FYLVNVYVPNSQQALSR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 ++ R + LEL++P+I GD N+ D NP +A F+ E R Sbjct: 116 LSYRMSWEVE--FRKFLKALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L N GF D R + Y++W Y + KN G RID+ + S + L A I Sbjct: 174 FNELLNAGFIDTFRYFYPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALI 233 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 G SDH PV + L Sbjct: 234 YKDILG----SDHCPVGLEL 249 >gi|327402657|ref|YP_004343495.1| exodeoxyribonuclease III Xth [Fluviicola taffensis DSM 16823] gi|327318165|gb|AEA42657.1| exodeoxyribonuclease III Xth [Fluviicola taffensis DSM 16823] Length = 254 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 61/262 (23%), Positives = 101/262 (38%), Gaps = 10/262 (3%) Query: 4 VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + ++NVN IRA + +KE D+ICLQETK + ET+ L+Y + Sbjct: 1 MKLLSFNVNGIRAIAGKSFLTDMKEMQADVICLQETKATVEQV-LETVNPLDYPFVYANE 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 G + + +E ++ + + + I G+ + Sbjct: 60 AGRKGYSGTAIISKVEPLSVVYDMGVSHHDEEGRVICAEYDKFYLITVYVPNSGSELLRL 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND-ACFTLEVRQ 181 Y + LE ++P++ GD+N+ + D P N A F E Sbjct: 120 PYR---KTWDADFLSYLKNLEAKKPVVVCGDFNVAHKAIDLARPKANYNKSAGFMQEEID 176 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 G D+ RA + Y++W Y + KN G RID+ ++S + A I Sbjct: 177 GMDAFTANGLVDSWRAKNGDEVKYTWWSYRGGAREKNVGWRIDYFLVSEGFVPKIKEATI 236 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 + G SDH PV V L + Sbjct: 237 HNEIFG----SDHCPVGVELSL 254 >gi|317011660|gb|ADU85407.1| exodeoxyribonuclease III [Helicobacter pylori SouthAfrica7] Length = 250 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 73/260 (28%), Positives = 120/260 (46%), Gaps = 13/260 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + + DI C+QE+K + + FE + + Sbjct: 1 MKLISWNVNGLRACMTKGFMDFFNSVDADIFCIQESKMQQEQNTFE-FKGYFDFWNCAIK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+GV +K +P+ + + ++ D + R + F + + N+Y P+ S Sbjct: 60 KGYSGVVTFTKKEPLSVSYGINIEEHDKEGRVVTCEFE----SFYLVNVYTPNSQQALSR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + ++SW F +F LEL++P+I GD N+ D NP +A F+ E R+ Sbjct: 116 -LNYRMSWEVEFKKFLKA-LELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L N GF D R + Y++W Y + KN G RID+ + S + L A I Sbjct: 174 FNELLNAGFIDTFRYFYPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALI 233 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 G SDH PV + L Sbjct: 234 YKDILG----SDHCPVGLEL 249 >gi|225026087|ref|ZP_03715279.1| hypothetical protein EUBHAL_00328 [Eubacterium hallii DSM 3353] gi|224956574|gb|EEG37783.1| hypothetical protein EUBHAL_00328 [Eubacterium hallii DSM 3353] Length = 250 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 65/258 (25%), Positives = 110/258 (42%), Gaps = 13/258 (5%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + KE + DI C+QETK ++ F + + + Sbjct: 1 MKLISWNVNGLRACVKKGFEDFFKEADADIFCVQETKLQEGQIDFAP-EGYECYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G A+ +K P+++ + ++ D + R I F + Sbjct: 60 KGYSGTAVFTKKHPLKVWNGIGMEEHDQEGRVITLEFEDFFFVTVYTPNSQSELKRLDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + R Q L+ E+P+I GD N+ + D NP + +A FT E R Sbjct: 120 M------KWEDDFREYLQELDKEKPVIMTGDLNVAHEEIDLKNPKTNKKNAGFTQEERNK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L GF D+ R + Y++W Y + K+ G RID+ ++S + A I Sbjct: 174 FTELLGAGFVDSFRYLNPELAGAYTWWSYRFKAREKDAGWRIDYFVVSERWKEKIEDAII 233 Query: 242 DTKPRGWTKPSDHTPVIV 259 G SDH P+ + Sbjct: 234 YKTVMG----SDHCPIGL 247 >gi|260425499|ref|ZP_05779479.1| exodeoxyribonuclease III [Citreicella sp. SE45] gi|260423439|gb|EEX16689.1| exodeoxyribonuclease III [Citreicella sp. SE45] Length = 262 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 86/268 (32%), Positives = 123/268 (45%), Gaps = 11/268 (4%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIET 59 MS T+ATWN+NS+R R + + E PD++CLQE K+ + P E ++L Y HI Sbjct: 1 MS-FTLATWNINSVRLREALVCQLLTEEAPDVLCLQECKSPVEKIPLEAFRALGYGHIVA 59 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 GQK YNGVAILSK ++ + E + + N Y+P G I Sbjct: 60 RGQKGYNGVAILSKLPIRDVGDRDFAQLGHARHVAAELENG-----VTVHNFYVPAGGDI 114 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEP--LIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + ++K +L E I GD NI P+ D ++ T Sbjct: 115 PDRELNEKFGQKLDYLAEMRDWFRAERFGKSILVGDLNIAPREDDVWSHKALLKVVSHTP 174 Query: 178 -EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSL 235 EV + + + D R LYS+W Y A W +KG R+DH+ +P+ Sbjct: 175 VEVAALAETQEAGNWVDITRKDIPEGQLYSWWSYRARDWDTADKGRRLDHVWATPDIAGA 234 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 HS+RI RGW KPSDH PV+ + D+ Sbjct: 235 GHSSRILRAARGWEKPSDHAPVLATFDL 262 >gi|229061336|ref|ZP_04198683.1| Exodeoxyribonuclease [Bacillus cereus AH603] gi|228717951|gb|EEL69596.1| Exodeoxyribonuclease [Bacillus cereus AH603] Length = 252 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 68/262 (25%), Positives = 118/262 (45%), Gaps = 14/262 (5%) Query: 4 VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + +WNVN +RA +++E+N DI CLQE K + + + Sbjct: 1 MKLISWNVNGLRAVIAKGGFLEYLEESNADIFCLQEIKLQSGQIDLNP-EGYYTYWNYAV 59 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G AI +K +PI + L ++ D + R I F + Sbjct: 60 KKGYSGTAIFTKKEPISVTYGLGIEEHDQEGRVITLEFDDFYMI-----TLYTPNSKRGL 114 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + D ++ W F + + L+ ++P+IF GD N+ + D NP + F+ E R+ Sbjct: 115 ERLDYRMEWEDDFRAYIKR-LDEKKPVIFCGDLNVAHKEVDLKNPKSNRKNPGFSDEERE 173 Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 F + GF D R + YS+W Y + +KN G R+D+ ++S + A+ Sbjct: 174 KFTCVLEAGFIDTYRYLYPDQEGAYSWWSYRMGARAKNIGWRLDYFVISERLEHKIIDAK 233 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I+++ G SDH PV + +D Sbjct: 234 INSEVMG----SDHCPVELHID 251 >gi|257870107|ref|ZP_05649760.1| exodeoxyribonuclease [Enterococcus gallinarum EG2] gi|257804271|gb|EEV33093.1| exodeoxyribonuclease [Enterococcus gallinarum EG2] Length = 261 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 69/261 (26%), Positives = 113/261 (43%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA N + + D CLQETK + + L + + Sbjct: 12 MKFISWNVNGLRAIVKKNFLEAFETFDADFFCLQETKLQAGQIELD-LPGYTQYWNYAEK 70 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K + + ++ D + R I + Sbjct: 71 KGYSGTAIFAKEPALAAHYGIGIEEHDAEGRVITLEYPEF-----FLVTCYTPNAQNELR 125 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + D +++W F + L+ ++P+I GD N+ Q D N + +A FT E R+ Sbjct: 126 RLDYRMTWEDAFRAY-LTDLKQQKPVILCGDLNVAHQNIDLKNWKTNQKNAGFTPEEREK 184 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F L + GFTD R + +YS+W Y ++ N G RID+ ++S + L A+I Sbjct: 185 FSTLLSAGFTDTFRYFYPDAEGIYSWWSYRFNARKNNAGWRIDYFVVSDDLNDRLVDAKI 244 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 T+ G SDH PV + L+ Sbjct: 245 HTEILG----SDHCPVELQLN 261 >gi|229098205|ref|ZP_04229152.1| Exodeoxyribonuclease [Bacillus cereus Rock3-29] gi|228685103|gb|EEL39034.1| Exodeoxyribonuclease [Bacillus cereus Rock3-29] Length = 252 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 64/262 (24%), Positives = 119/262 (45%), Gaps = 14/262 (5%) Query: 4 VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + +WNVN +RA +++E+N DI CLQE K + + + Sbjct: 1 MKLISWNVNGLRAVIAKGGFLEYLEESNADIFCLQEIKLQSGQIDLNP-EGYYTYWNYAV 59 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G AI K +P+ + L ++ D + R I F + + + G Sbjct: 60 KKGYSGTAIFMKKEPLSVTYGLGIEEHDQEGRVITLEFE-DFYMITLYTPNSKRGLERLD 118 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + + + R ++L+ ++P++F GD N+ + D NP + F+ E R+ Sbjct: 119 YRME-----WEDDFRTYIKQLDEKKPVVFCGDLNVAHKEIDLKNPKSNRKNPGFSDEERE 173 Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 F ++ GF D R + YS+W Y + +KN G R+D+ ++S + A+ Sbjct: 174 KFTRILEEGFVDTYRHLYPNQEGAYSWWSYRMGARAKNIGWRLDYFVVSERIKGQITDAK 233 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I+++ G SDH PV + ++ Sbjct: 234 INSEIMG----SDHCPVELHIN 251 >gi|40063316|gb|AAR38134.1| exodeoxyribonuclease III [uncultured marine bacterium 578] Length = 254 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 58/263 (22%), Positives = 105/263 (39%), Gaps = 12/263 (4%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCG 61 + + T NVN IRA +W+K+ N D++CLQE K ++ Y + + Sbjct: 1 MRIITINVNGIRAAERKGFFSWLKKQNADVVCLQEIKAQEDQLDERFYPPSMYTYYHSAE 60 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G + K +P + D ++ ++ + + Sbjct: 61 RKGYSGTGLYCKSKPDRVAYSPWEDINSEGRIIQADFGELSVISIYLPSGSSKEERQAFK 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 ++ RFL + + I GD+NI + D N + ++ F E R Sbjct: 121 MEF-----ITDRFLPHLRKLQKDGRKYIICGDWNIAHKKIDLKNWRSNQKNSGFLPEERA 175 Query: 182 SFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 L + G+ D+ R + Y++W +W N G R+D+ ++S L S Sbjct: 176 WLDTLYDEVGYIDSFREINYDEFQYTWWSNRGQAWLNNTGWRLDYQVVSSNLAGLASSCE 235 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263 I K R SDH+P+I+ ++ Sbjct: 236 IYKKER----FSDHSPLIIDYNL 254 >gi|306820340|ref|ZP_07453979.1| exodeoxyribonuclease III [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551669|gb|EFM39621.1| exodeoxyribonuclease III [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 251 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 73/262 (27%), Positives = 115/262 (43%), Gaps = 13/262 (4%) Query: 4 VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA R K + D CLQE K ++ + +Y + Sbjct: 1 MKFVSWNVNGLRAAREKGFDEIFKNFDADFFCLQEIKLQEGQIDMDMDGYYSY-WNYAKR 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI ++ +PI++ L ++ D + R I + + +Y P+ Sbjct: 60 KGYSGTAIFTRIEPIDVFYGLGKEEHDDEGRLITLEYP----EFYVSTVYTPNSKQELLR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 D + W F F L+ ++P+I GD N+ + D NP + FT E R+ Sbjct: 116 -LDYRQEWEDEFREFFKN-LDAKKPVIICGDMNVAHKEIDLKNPKTNRKNPGFTDEEREK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F L + GFTD R + + YS+W Y ++ N G RID+ ++S L +A I Sbjct: 174 FTLLLDAGFTDTFRYFYPDKENEYSWWSYRFNARKNNTGWRIDYFLVSDRLQEKLTAASI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 G SDH PV V L + Sbjct: 234 HQDVFG----SDHCPVSVELSL 251 >gi|304390659|ref|ZP_07372612.1| exodeoxyribonuclease III [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315654251|ref|ZP_07907159.1| exodeoxyribonuclease III [Mobiluncus curtisii ATCC 51333] gi|304326415|gb|EFL93660.1| exodeoxyribonuclease III [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315491286|gb|EFU80903.1| exodeoxyribonuclease III [Mobiluncus curtisii ATCC 51333] Length = 286 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 69/286 (24%), Positives = 122/286 (42%), Gaps = 27/286 (9%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSIR R++ + A+++ N D++ +QE K + FP ++ Y + G Sbjct: 1 MRIATWNVNSIRTRVNRVTAFLERENIDVLAMQEIKCRNDQFPTLAFETAGYQVFVNGLN 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT---------INTQTLRIGNLYLP 114 +NGVA+ ++ + Q F + + +LY+P Sbjct: 61 QWNGVAVAARQGISAHLLGTEFYGAIDQPYFSVPPKPPQLEPRVLGVRVAGVECWSLYVP 120 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPL--IFAGDYNIIPQPHDCYNPIIWEND 172 +G + Y K+ W+ + L+ + ++ GD+N+ P+ D ++ + Sbjct: 121 NGREVGHLHYQYKLKWLDSLRSHVIRTLDTDPESLGLYLGDFNVAPRDEDVWDMADFAGA 180 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHD----------------THHLYSFWDYYADSWS 216 + RQ F KL + HD +++WDY W Sbjct: 181 THVSEPERQVFAKLLDPDTVADAVTLHDDLIEGLPGNLTEITRKFAPGWTYWDYQRARWR 240 Query: 217 KNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 +N+G++ID + +P S + A IDT R +PSDH PVIV + Sbjct: 241 RNQGMKIDFALATPRLVSRVTGAYIDTAERDGEQPSDHAPVIVDFE 286 >gi|218281326|ref|ZP_03487814.1| hypothetical protein EUBIFOR_00379 [Eubacterium biforme DSM 3989] gi|218217511|gb|EEC91049.1| hypothetical protein EUBIFOR_00379 [Eubacterium biforme DSM 3989] Length = 249 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 68/261 (26%), Positives = 117/261 (44%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN IRA + + + DI C+QETK + + +I + + Sbjct: 1 MKCISWNVNGIRAVLKKDFVEILYALDADIFCIQETKAQPDQIEVDCELYPYQYINSAQK 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G I K +P+ I + ++ D + R I + + + G+ + Sbjct: 61 KGYSGTMIFCKEEPLSIRYGMNMEEHDTEGRVITLEYP---EYYVVTVYTPNSGDGLKRL 117 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 Y + F++ L++P++ GD+N+ + D NP +A FT E R S Sbjct: 118 DYRMEWDK-----AFSAYLKSLDKPVMACGDFNVANEEIDIKNPKTNHKNAGFTDEERNS 172 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F++ F D R+ + YS+W Y + KN G RID+ ++SPE + A+I Sbjct: 173 FKENLLAYFVDTYRSLYPEKVEYSWWSYRFKAREKNAGWRIDYWLVSPELKDKIVDAKIL 232 Query: 243 TKPRGWTKPSDHTPVIVSLDI 263 T G SDH PV + +++ Sbjct: 233 TDIYG----SDHCPVQLDIEV 249 >gi|291300710|ref|YP_003511988.1| exodeoxyribonuclease III Xth [Stackebrandtia nassauensis DSM 44728] gi|290569930|gb|ADD42895.1| exodeoxyribonuclease III Xth [Stackebrandtia nassauensis DSM 44728] Length = 265 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 63/266 (23%), Positives = 107/266 (40%), Gaps = 6/266 (2%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IET 59 ++TV T NVN IRA W+ + D++CLQE + D+ P E +H + Sbjct: 1 MLTVTTANVNGIRAAARKGFVEWLSDTTADVVCLQEVRATDEQVPVEVRDVDGWHMIVAP 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 K GVA+LS+ P + ++ DV R++E T + G P Sbjct: 61 AADKGRAGVAVLSRETPARVQVGFGSEEFDVSGRYLEVDLPGVTVA-SLYLPSGETGTPR 119 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K + + + + ++ GD+NI Q D N + A F E Sbjct: 120 QDQKERFMAEFAEYLVALRKRAEADNRHVVICGDWNIAHQEIDLKNWKANKKTAGFLPEE 179 Query: 180 RQSFQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 R+ ++ + A R + YS+W Y ++ + G RID+ + +P Sbjct: 180 REWMTRVFDDIGYVDVARRLHPEGPGPYSWWSYRGRAFDNDAGWRIDYHIATPGLAEAAK 239 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263 +A ++ + SDH PV V+ + Sbjct: 240 TAVVERAATHDARWSDHAPVTVTYAV 265 >gi|317014940|gb|ADU82376.1| exodeoxyribonuclease III [Helicobacter pylori Gambia94/24] Length = 250 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 69/260 (26%), Positives = 115/260 (44%), Gaps = 13/260 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + + D+ C+QE+K + + FE + + Sbjct: 1 MKLISWNVNGLRACMTKGFMDFFNSVDADVFCIQESKMQQEQNTFE-FKGYFDFWNCAIK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+GV +K +P+ + + + D + R I F + + N+Y P+ S Sbjct: 60 KGYSGVVTFTKKEPLSVSYGIDIKEHDKEGRVITCEFE----SFYLVNVYTPNSQQALSR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 ++ + + LEL++P+I GD N+ D NP +A F+ E R+ Sbjct: 116 LSYRMNWEVE--FKKFLKALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L N GF D R + Y++W Y + KN G RID+ + S + L A I Sbjct: 174 FSELLNAGFIDTFRYFYPNKEKAYTWWSYMQQARDKNVGWRIDYFLCSNPLKTRLKDALI 233 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 G SDH PV + L Sbjct: 234 YKDILG----SDHCPVGLEL 249 >gi|119503212|ref|ZP_01625296.1| exodeoxyribonuclease III [marine gamma proteobacterium HTCC2080] gi|119460858|gb|EAW41949.1| exodeoxyribonuclease III [marine gamma proteobacterium HTCC2080] Length = 259 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 69/263 (26%), Positives = 115/263 (43%), Gaps = 13/263 (4%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC-- 60 + V T N N IRA +W+ + + D +C+QETK + YH Sbjct: 1 MRVITCNTNGIRAAQRKGFFSWLSQQDADFVCIQETKAQIHQLDPALFAPEGYHCTYNDA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + Y+G A+ S+ +P +VT L + +D Q R+++A F + +LY+P G+ Sbjct: 61 QKPGYSGTAVFSRIKPKTVVTKLGWEPMDSQGRYLQADFKG----FSVISLYVPSGS-SG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EV 179 D K ++++FL I GD+NI + D N ++ F E Sbjct: 116 EAAQDRKEIFMEKFLPHLQALKRKRREFIICGDWNICHREIDLKNWRGNRKNSGFLPHER 175 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + +G+ D R + Y++W +W+KN G R+D+++ +P S SA Sbjct: 176 AWLDRVYDELGWVDVFRRINPNPDQYTWWSNRGQAWAKNVGWRLDYMLCTPGIASAGSSA 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 I R SDH P+I+ D Sbjct: 236 SIYRDER----FSDHAPLIIDFD 254 >gi|30250127|ref|NP_842197.1| exodeoxyribonuclease III:exodeoxyribonuclease III xth [Nitrosomonas europaea ATCC 19718] gi|30139234|emb|CAD86104.1| Exodeoxyribonuclease III:Exodeoxyribonuclease III xth [Nitrosomonas europaea ATCC 19718] Length = 257 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 62/263 (23%), Positives = 112/263 (42%), Gaps = 13/263 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60 + + T NVN +R+ L W+ D+IC+QE K + + Y + Sbjct: 1 MRIITLNVNGLRSAAGKGLFDWLPRQEADVICVQELKAQQGDINGVMRAPDGYSGYFHCA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GV + ++Y P +I+ ++D++ RF+ F L + ++YLP G+ Sbjct: 61 EKKGYSGVGLYTRYSPDQIIEGTGIPEIDMEGRFLRVDFG----NLTVISIYLPSGS-SG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K +++ FL E ++ GD+NI + D N + ++ F E R Sbjct: 116 EHRQAAKFFFMEHFLPLLQSLAECGREVLLCGDWNIAHKAIDLKNWRSNQKNSGFLPEER 175 Query: 181 QS-FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + D R + Y++W +W+KN G RID+ + +P ++ Sbjct: 176 AWLSTVFDELKLVDVFRKINPEPDQYTWWSNRGQAWAKNVGWRIDYQIATPGLAAMATGV 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 I R SDH P+ + D Sbjct: 236 SIYKAER----FSDHAPLTIDYD 254 >gi|17544859|ref|NP_518261.1| putative exodeoxyribonuclease III protein [Ralstonia solanacearum GMI1000] gi|17427148|emb|CAD13668.1| putative exodeoxyribonuclease III protein [Ralstonia solanacearum GMI1000] Length = 261 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 61/264 (23%), Positives = 113/264 (42%), Gaps = 12/264 (4%) Query: 3 VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IET 59 ++ + + N+N +R A W+ + + D +C+QE K + E L YH + Sbjct: 1 MLRIISANLNGVRSAASKGFFEWMGKQDADFVCVQELKCAQDDMTPEFLAPHGYHGVFQH 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G + +++QP +++ G + D + R++EA + L I ++Y+P G+ Sbjct: 61 AVKKGYSGAGLYARHQPDDVIVGFDGGEFDAEGRYVEARYG----KLSIISVYVPSGSSG 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + R E ++ GD NI+ + D N + ++ E Sbjct: 117 EERQQAKYRFMDLFMQHLTDLRHEKGREVVLCGDVNIVHKEIDIKNWKGNQKNSGCLPEE 176 Query: 180 RQSFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R +L + G+ D R Y++W +++KN G RID+ + +P + S Sbjct: 177 RAWLTRLFDEVGYVDVFRTLDPRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGIAATARS 236 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 I K SDH P+ V D Sbjct: 237 TSIFRDI----KFSDHAPLTVDYD 256 >gi|294625183|ref|ZP_06703825.1| exodeoxyribonuclease III [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294666113|ref|ZP_06731371.1| exodeoxyribonuclease III [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292600502|gb|EFF44597.1| exodeoxyribonuclease III [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292604127|gb|EFF47520.1| exodeoxyribonuclease III [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 266 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 66/273 (24%), Positives = 112/273 (41%), Gaps = 24/273 (8%) Query: 4 VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + ++N N +R A AW + D++C+QETK ++ Y Sbjct: 1 MRIISFNANGLRSAASKGFFAWFAAQDADVLCVQETKAQEHQLAGPDFLPAGYKAWFRDA 60 Query: 62 --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GVAI S+++P E+ T L + D + R+IEA F L + + Y+P G+ Sbjct: 61 STKKGYSGVAIYSRHEPDEVRTALGWPEFDEEGRYIEARFG----NLSVVSFYIPSGS-S 115 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + D K ++ + L + GD+NI+ D N + ++ Sbjct: 116 GELRQDYKFQVMQWLRPILDEWLASGRQYVLCGDWNIVRTALDIKNWKSNQKNSGCLPPE 175 Query: 180 RQSFQKLQN-----------MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 R L G+ D+ R H Y++W + + N G RID+ ++ Sbjct: 176 RDWLNGLCADAPEDASAADGRGWVDSYRVLHPQGQDYTWWSNRGAARANNVGWRIDYQLV 235 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +P L + I + R SDH P IV Sbjct: 236 TPGLRDTLKACSIYREER----FSDHAPYIVDY 264 >gi|21233269|ref|NP_639186.1| exodeoxyribonuclease III [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66770227|ref|YP_244989.1| exodeoxyribonuclease III [Xanthomonas campestris pv. campestris str. 8004] gi|21115105|gb|AAM43077.1| exodeoxyribonuclease III [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575559|gb|AAY50969.1| exodeoxyribonuclease III [Xanthomonas campestris pv. campestris str. 8004] Length = 266 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 64/273 (23%), Positives = 110/273 (40%), Gaps = 24/273 (8%) Query: 4 VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + ++N N +R A W + D++C+QETK ++ Y Sbjct: 1 MRIISFNANGLRSAASKGFFEWFATQDADVLCIQETKAQEHQLAGPEFLPAGYKAWFRDA 60 Query: 62 --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GVAI +K +P E+ T L + D + R+IEA F L + + Y+P G+ Sbjct: 61 STKKGYSGVAIYAKREPDEVRTALGWPEFDEEGRYIEARFG----NLSVVSFYIPSGS-S 115 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K ++ S+ L + GD+NI+ D N + ++ Sbjct: 116 GELRQGYKFQVMEWLRPILSEWLASGRQYVLCGDWNIVRSALDIKNWKSNQKNSGCLPPE 175 Query: 180 RQSFQKLQN-----------MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 R L G+ D+ R H Y++W + + N G RID+ ++ Sbjct: 176 RDWLNGLCADLLDEADASNGRGWVDSYRVLHPQGEDYTWWSNRGAARANNVGWRIDYQLV 235 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +P + + I + R SDH P IV Sbjct: 236 TPGLRDKVQACSIYREQR----FSDHAPYIVDY 264 >gi|218961468|ref|YP_001741243.1| Exonuclease III [Candidatus Cloacamonas acidaminovorans] gi|167730125|emb|CAO81037.1| Exonuclease III [Candidatus Cloacamonas acidaminovorans] Length = 256 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 65/265 (24%), Positives = 109/265 (41%), Gaps = 14/265 (5%) Query: 4 VTVA--TWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFET--LQSLNYHIE 58 + + +WNVN +RA + I++ PDI+ +QETK ++ P E L + Sbjct: 1 MKLLLWSWNVNGLRAALNKGFIEIIQKEQPDILGIQETKLQEHQIPEELNTLNEYLIYWS 60 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 +K Y+G + +K P+ T + D + R A +T I Sbjct: 61 HSLRKGYSGTGLFTKLLPLSFSTGFGNPEFDNEGRINIAEYTEF-----IFFNIYFPNGQ 115 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + + K+ + R L ++ + ++ GD+N P D NP E + F Sbjct: 116 KDDERLNYKLRFYDRCLEVMEEKRTSGKIILVGGDFNTAHHPIDLANPKENEKTSGFLPI 175 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R K+ MG+ D R + Y++W Y + +N G R+D+ ++ E + Sbjct: 176 ERAWLDKIAEMGWIDTFRYFDKSPEQYTWWSYRTKARPRNVGWRLDYFWVNKEGIEHIKK 235 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263 A I G SDH PV V L+I Sbjct: 236 AGIRQDIEG----SDHCPVFVELEI 256 >gi|163814023|ref|ZP_02205416.1| hypothetical protein COPEUT_00176 [Coprococcus eutactus ATCC 27759] gi|158450717|gb|EDP27712.1| hypothetical protein COPEUT_00176 [Coprococcus eutactus ATCC 27759] Length = 257 Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats. Identities = 67/261 (25%), Positives = 106/261 (40%), Gaps = 13/261 (4%) Query: 5 TVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +WNVN IRA + + DI C+QE+K ++ + Y +K Sbjct: 8 KLISWNVNGIRACAGKGFMDFFNSIDADIFCIQESKMQEGQLTLDMPGYYQY-WNYADKK 66 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 Y+G AI +K + + + D+ D + R I + + Sbjct: 67 GYSGTAIFTKEKSLSETKGIGIDEHDHEGRVITLEYENFYMVTVYTPNSQNELARLDYRM 126 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + R ++LE +P+I GD N+ D NP +A FT E R+ Sbjct: 127 ------KWEDDFRAYLKKLEENKPVIVCGDMNVAHNEIDLKNPKTNRKNAGFTDEEREKM 180 Query: 184 QKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 L + GF D R + ++YS+W Y + KN G RID+ + S L A+I Sbjct: 181 TVLLDDGFIDTFRYFYPDQENIYSWWSYRFKAREKNAGWRIDYFLTSESLKDKLIDAKIH 240 Query: 243 TKPRGWTKPSDHTPVIVSLDI 263 T G SDH PV + +D+ Sbjct: 241 TDIMG----SDHCPVELDIDM 257 >gi|91776834|ref|YP_546590.1| exodeoxyribonuclease III (xth) [Methylobacillus flagellatus KT] gi|91710821|gb|ABE50749.1| exodeoxyribonuclease III (xth) [Methylobacillus flagellatus KT] Length = 257 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 75/265 (28%), Positives = 121/265 (45%), Gaps = 15/265 (5%) Query: 3 VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IET 59 ++ + + N+N IR A W++E + DI+CLQE K ++ + E LQ Y+ Sbjct: 1 MLRIISLNLNGIRSAASKGFYPWMQEQHADIVCLQELKAQEADMTAEMLQPEGYYGYFHY 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GV I S+ + ++ L D+D + R++EA + L + +LYLP G+ Sbjct: 61 ADKKGYSGVGIYSRKKADAVIVGLGMADIDSEGRYLEARYD----NLSVVSLYLPSGS-S 115 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K S + RF+ + ++ GD+NI Q D N ++ F E Sbjct: 116 GEERQAFKFSVMARFMPHLESLIRDGRDVVICGDWNIAHQEADLKNWRGNRKNSGFLPEE 175 Query: 180 RQSFQKLQNM-GFTDAIRATHDT--HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 R L G+ D R H Y++W +W+KN G RID+ + +P + Sbjct: 176 RAWLTDLFGRVGWVDVYRLLHPDTTDACYTWWSNRGQAWAKNVGWRIDYQVATPALAARA 235 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSL 261 SA I R SDH P+IV Sbjct: 236 VSASIYKDAR----FSDHAPLIVDY 256 >gi|261838799|gb|ACX98565.1| exodeoxyribonuclease [Helicobacter pylori 51] Length = 250 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 69/260 (26%), Positives = 115/260 (44%), Gaps = 13/260 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + + D+ C+QE+K + + FE + + Sbjct: 1 MKLISWNVNGLRACMTKGFMDFFNSVDADVFCIQESKMQQEQNTFE-FKGYFDFWNCAIK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+GV +K +P+ + + D+ D + R + F + + N+Y P+ S Sbjct: 60 KGYSGVVTFTKKEPLSVSYGINIDEHDKEGRVVTCEFE----SFYLVNVYTPNSQQALSR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 ++ + + LEL++P+I GD N+ D NP +A F+ E R Sbjct: 116 LSYRMSWEVE--FKKFLKALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L N GF D R + Y++W Y + KN G RID+ + S + L A I Sbjct: 174 FNELLNAGFIDTFRYFYPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALI 233 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 G SDH PV + L Sbjct: 234 YKDILG----SDHCPVGLEL 249 >gi|167585100|ref|ZP_02377488.1| exodeoxyribonuclease III Xth [Burkholderia ubonensis Bu] Length = 257 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 61/264 (23%), Positives = 111/264 (42%), Gaps = 14/264 (5%) Query: 3 VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59 ++ V T N+N IR A W+ E N D +C+QE K + P E ++ + Sbjct: 1 MMRVITANLNGIRSAAKKGFFEWLGEQNADCVCVQEIKVSADDLPAEFVEPHGLRSYFHH 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G + S+ +P +++ + D + R++EA + L + ++Y+P G+ Sbjct: 61 AEKKGYSGAGLYSRREPDDVIIGFGSSEFDSEGRYVEARYG----KLSVVSVYVPSGSSG 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + L+ + +I GD NI+ + D N + ++ E Sbjct: 117 DERQQA--KYRFMDEFMPHLAELKKKREVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEE 174 Query: 180 RQSFQK-LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R + ++G+ D RA Y++W +++KN G RID+ + +P Sbjct: 175 RAWLTQLFDDVGYVDVFRALDPRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGVAGTAKR 234 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 I K SDH P+ V D Sbjct: 235 TSIFKDI----KFSDHAPLTVDYD 254 >gi|296535508|ref|ZP_06897694.1| exodeoxyribonuclease III [Roseomonas cervicalis ATCC 49957] gi|296264163|gb|EFH10602.1| exodeoxyribonuclease III [Roseomonas cervicalis ATCC 49957] Length = 255 Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats. Identities = 95/260 (36%), Positives = 138/260 (53%), Gaps = 6/260 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE-TCGQ 62 + +A++NVNS+R R+ +L +++ PD++ LQE K + + FP L Y Q Sbjct: 1 MRLASFNVNSVRKRVPHLRRFLENAQPDLLFLQELKCKTEEFPAGEFTDLGYTSHAVGQQ 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 NGVA+L + + LPG D D AR++E T +YLP+GN + Sbjct: 61 GGRNGVAVLGRVPYEVVAEELPGGDGDTHARYVEVTAEGA----SFAGIYLPNGNSGGAE 116 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 Y K+ W++R A RL+ P GD+N+ P D + DA E R Sbjct: 117 GYAYKLGWMRRLRALAQARLDAFTPYAILGDFNVCPTELDLAPGALPPTDALVRPETRAE 176 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F+ L N+G TDA+RA H LY++WDY ++ N+G+RIDH MLSPE L A +D Sbjct: 177 FRALANLGLTDALRALHPGERLYTYWDY-GPAFEGNRGLRIDHAMLSPELAERLARAWVD 235 Query: 243 TKPRGWTKPSDHTPVIVSLD 262 T PR +PSDHTP++V L+ Sbjct: 236 TAPRSQEQPSDHTPLLVELE 255 >gi|302388430|ref|YP_003824252.1| exodeoxyribonuclease III [Clostridium saccharolyticum WM1] gi|302199058|gb|ADL06629.1| exodeoxyribonuclease III [Clostridium saccharolyticum WM1] Length = 251 Score = 179 bits (455), Expect = 3e-43, Method: Composition-based stats. Identities = 72/263 (27%), Positives = 120/263 (45%), Gaps = 15/263 (5%) Query: 1 MSVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 M + +WNVN +RA + + KE + D+ C+QE+K ++ TL + + Sbjct: 1 MKKM--ISWNVNGLRACVEKGFLDYFKEMDADVFCIQESKLQEGQIDL-TLPGYHQYWNY 57 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G A+ +K +P+ + + ++ D + R I A + + Sbjct: 58 AEKKGYSGTALFTKEKPLSVAYGINAEEHDREGRVIAAEYPE-----YYVVTCYTPNSQN 112 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + +++W L + + LE ++P+IF GD N+ + D NP +A FT E Sbjct: 113 ELARLPYRLTWEDAVLAYLKK-LEEKKPVIFCGDLNVAHKEIDLKNPKTNRKNAGFTDEE 171 Query: 180 RQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R+ F L GF D R + +YS+W Y + KN G RID+ +S L S Sbjct: 172 REKFTVLLESGFIDTYRYFYPEQEGIYSWWSYRFSARKKNAGWRIDYFCVSESLKDRLAS 231 Query: 239 ARIDTKPRGWTKPSDHTPVIVSL 261 A I T+ G SDH PV + + Sbjct: 232 AAIHTEVLG----SDHCPVELVI 250 >gi|82701358|ref|YP_410924.1| exodeoxyribonuclease III [Nitrosospira multiformis ATCC 25196] gi|82409423|gb|ABB73532.1| exodeoxyribonuclease III [Nitrosospira multiformis ATCC 25196] Length = 259 Score = 179 bits (455), Expect = 3e-43, Method: Composition-based stats. Identities = 64/263 (24%), Positives = 115/263 (43%), Gaps = 13/263 (4%) Query: 4 VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + T N+N IR A W+ + DI+C+QE K + + E + YH Sbjct: 1 MRIITLNLNGIRSAANKGFFRWLPLQDADIVCVQELKAQVGDITGEVVSPDGYHGYFHCA 60 Query: 62 -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 ++ Y+GV I ++ +P + L ++D + R++ F L I ++Y P G+ Sbjct: 61 EKRGYSGVGIYTRQKPGGVTEGLGVPEIDAEGRYLRVDFG----QLSIISIYFPSGS-AG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EV 179 + K ++++F + +I GD+NI + D N + ++ F E Sbjct: 116 EHRQAVKYFFMEQFFPMLEKLAACGSEIILCGDWNIAHKEIDLRNWRSNQKNSGFLPQER 175 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 Q +GF D R + Y++W +W+KN G RID+ + +P ++ Sbjct: 176 AWLTDVFQELGFVDVFRRINPEPDQYTWWSNRGQAWAKNVGWRIDYQIATPGIAGKANAV 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 I R SDH+P+I+ D Sbjct: 236 SIYKTER----FSDHSPLIIDYD 254 >gi|304438523|ref|ZP_07398463.1| exodeoxyribonuclease III [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304368606|gb|EFM22291.1| exodeoxyribonuclease III [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 250 Score = 179 bits (455), Expect = 3e-43, Method: Composition-based stats. Identities = 67/261 (25%), Positives = 107/261 (40%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + KE + D CLQETK ++ + L + + + Sbjct: 1 MRFVSWNVNGLRAALKKGFMEAFKELDADAFCLQETKMQEGQAILD-LPGYEQYFYSAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI ++ +P+ + + + D + R I F + Sbjct: 60 KGYSGTAIFTRVKPLSVAYGIGIPEHDHEGRVITMEFNDVYLVTVYTPNAKRALERLDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + R L ++P++ GD N+ D NP +A FT E R Sbjct: 120 M------TWEDAFRAFLLDLRAKKPVVVCGDLNVAHTEIDLKNPKSNRRNAGFTDEERGK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L N GF D RA + Y++W Y + N G RID+ ++S E + +A I Sbjct: 174 FTELLNAGFVDTFRALYPDLTGAYTWWSYLRHARETNAGWRIDYFLVSEELRDRIAAAEI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 G SDH PV ++L Sbjct: 234 HADVFG----SDHCPVSLTLK 250 >gi|297569473|ref|YP_003690817.1| exodeoxyribonuclease III Xth [Desulfurivibrio alkaliphilus AHT2] gi|296925388|gb|ADH86198.1| exodeoxyribonuclease III Xth [Desulfurivibrio alkaliphilus AHT2] Length = 490 Score = 179 bits (455), Expect = 3e-43, Method: Composition-based stats. Identities = 58/261 (22%), Positives = 101/261 (38%), Gaps = 12/261 (4%) Query: 4 VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + +A+WNVN +RA A E + D++ +QE K P E Y Sbjct: 238 LRLASWNVNGLRAIAKKGFAELAGELDADLLAIQEIKAHPDQLPAEARALPGYQAFWLPA 297 Query: 62 -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GVAI S+ +P++++ + ++ Q + + + Sbjct: 298 KRKGYSGVAIYSRLEPLKVLYGMGQEEKYEQEGRVLTMEFADFFLVNAYLPNAQPELARL 357 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 K D R + + L ++ ++ GD N+ + D P + F+ R Sbjct: 358 PFKLDF-----CRHFQQFCENLATQKNVVVCGDLNVAHREIDLARPQENQQSPGFSPAER 412 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 GFTD R + Y++W Y + +N G RID+ + + A Sbjct: 413 AWLDGFLANGFTDTFRLFNQEGGNYTWWSYRGGARQRNVGWRIDYFCIDSAGRRRVREAG 472 Query: 241 IDTKPRGWTKPSDHTPVIVSL 261 I + G SDH PV ++L Sbjct: 473 IRPEIMG----SDHCPVTLTL 489 >gi|167736590|ref|ZP_02409364.1| exodeoxyribonuclease III [Burkholderia pseudomallei 14] Length = 256 Score = 179 bits (455), Expect = 3e-43, Method: Composition-based stats. Identities = 63/264 (23%), Positives = 111/264 (42%), Gaps = 14/264 (5%) Query: 3 VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59 ++ V T N+N IR A W+ E N D +C+QE K + P E ++ H Sbjct: 1 MLRVITANLNGIRSAAKKGFFEWLGEQNADCVCVQEIKVSADDLPAEFVEPHGLRSHFHH 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G + S+ +P +++ + D + R++EA F L + ++Y+P G+ Sbjct: 61 AQKKGYSGAGLYSRREPDDVIIGYGSSEFDAEGRYVEARFG----KLSVVSVYVPSGSSG 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + L+ + +I GD NI+ + D N + ++ E Sbjct: 117 DERQQA--KYRFMDEFMPHLAELKAKREVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEE 174 Query: 180 RQSFQK-LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R K ++G+ D R Y++W +++KN G RID+ + +P + Sbjct: 175 RAWLTKLFDDVGYVDVFRTLDPRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGVAGTAKN 234 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 I K SDH P+ V D Sbjct: 235 TSIFRDI----KFSDHAPLTVDYD 254 >gi|288817830|ref|YP_003432177.1| exodeoxyribonuclease III [Hydrogenobacter thermophilus TK-6] gi|288787229|dbj|BAI68976.1| exodeoxyribonuclease III [Hydrogenobacter thermophilus TK-6] gi|308751428|gb|ADO44911.1| exodeoxyribonuclease III Xth [Hydrogenobacter thermophilus TK-6] Length = 268 Score = 179 bits (455), Expect = 3e-43, Method: Composition-based stats. Identities = 84/261 (32%), Positives = 139/261 (53%), Gaps = 6/261 (2%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64 +A++NVNSI R + +W++ + DI+CLQE KT D+NFP E + Y T GQK+ Sbjct: 12 KIASYNVNSINTRKELVLSWLERDPVDILCLQELKTTDENFPKEDFMKMGYECYTHGQKT 71 Query: 65 YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124 YNGVAI S++ E+ + D + R I F + I N Y PHG K+ Sbjct: 72 YNGVAICSRFLLEEVFKGMGDATYDQEKRVIGGRFK----DVWIINAYFPHGESRGGRKF 127 Query: 125 DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ 184 K+ + ++FLRF ++ + ++ GD N+ + D Y+P++ ++ E R + + Sbjct: 128 FWKLGFYEKFLRFITESFSPNDKIVLVGDMNVAMEDIDVYDPVLLKDTIGTMKEERDALK 187 Query: 185 KLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK 244 KL + GF DA R + +++WDY K++G+RID+I+++ + L +D Sbjct: 188 KLISWGFVDAFRYLYPEKRQFTWWDYIGGMVWKDQGMRIDYILITKPLLAYLRDVYVDMW 247 Query: 245 PRGW--TKPSDHTPVIVSLDI 263 PR KPSDH P++ ++ Sbjct: 248 PRKRRNPKPSDHAPIVGVFEL 268 >gi|297200306|ref|ZP_06917703.1| exodeoxyribonuclease III [Streptomyces sviceus ATCC 29083] gi|197709420|gb|EDY53454.1| exodeoxyribonuclease III [Streptomyces sviceus ATCC 29083] Length = 274 Score = 179 bits (455), Expect = 3e-43, Method: Composition-based stats. Identities = 57/268 (21%), Positives = 100/268 (37%), Gaps = 8/268 (2%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 V+TV + NVN +RA W+ E + D++CLQE + E + P +H+ Sbjct: 8 VLTVTSANVNGLRAAAKKGFVEWLAETSADVLCLQEVRAEPQQLPESVRAPEGWHVVHAP 67 Query: 62 Q--KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 K GV++ ++ +P + + D R++EA T + G Sbjct: 68 AAAKGRAGVSLYTRREPDRVRIGFGSAEFDTSGRYVEADLPGVTVA-SLYLPSGEVGTER 126 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K ++ ++ ++ GD+NI Q D N + + F E Sbjct: 127 QDEKVRFMDEFLVHLKDLRTRAAADGREVVVCGDWNIAHQQADLKNWRANQKSSGFLPEE 186 Query: 180 RQSFQKLQN----MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 R ++ D YS+W Y ++ + G RID+ + +P S Sbjct: 187 RAWLSRVLEPTDGGYVDVVRSLHPDVEGPYSWWSYRGRAFDNDSGWRIDYHVSTPGLASK 246 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 ++ + SDH PV V D+ Sbjct: 247 AVKGFVERAATHAERWSDHAPVTVVYDL 274 >gi|317178229|dbj|BAJ56018.1| exodeoxyribonuclease [Helicobacter pylori F16] Length = 250 Score = 179 bits (455), Expect = 3e-43, Method: Composition-based stats. Identities = 67/260 (25%), Positives = 116/260 (44%), Gaps = 13/260 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + + D+ C+QE+K + + FE + + Sbjct: 1 MKLISWNVNGLRACMTKGFMDFFNSVDADVFCIQESKMQQEQNTFE-FKGYFDFWNCAIK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+GV +K +P+ + + ++ + + R + F + + N+Y P+ S Sbjct: 60 KGYSGVVTFTKKEPLSVSYGINMEEHNKEGRVVTCEFE----SFYLVNVYTPNSQQALSR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 ++ + + LEL++P+I GD N+ D NP +A F+ E R+ Sbjct: 116 LSYRMSWEVE--FKKFLKALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L N GF D R + Y++W Y + KN G RID+ + S + L A I Sbjct: 174 FNELLNAGFIDTFRYFYPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALI 233 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 G SDH PV + L Sbjct: 234 YKDILG----SDHCPVGLEL 249 >gi|317013296|gb|ADU83904.1| exodeoxyribonuclease III [Helicobacter pylori Lithuania75] Length = 250 Score = 179 bits (455), Expect = 3e-43, Method: Composition-based stats. Identities = 68/260 (26%), Positives = 116/260 (44%), Gaps = 13/260 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + + D+ C+QE+K + + FE + + Sbjct: 1 MKLISWNVNGLRACMTKGFMDFFNSVDADVFCIQESKMQQEQNTFE-FKGYFDFWNCAIK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+GV +K +P+ + + ++ D + R + F + + N+Y P+ S Sbjct: 60 KGYSGVVTFTKKEPLSVSYGINIEEHDKEGRVVTCEFE----SFYLVNVYTPNSQQALSR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 ++ + + LEL++P+I GD N+ D NP +A F+ E R+ Sbjct: 116 LSYRISWEVE--FKKFLKALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L N GF D R + Y++W Y + KN G RID+ + S + L A I Sbjct: 174 FSELLNAGFIDTFRYFYPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALI 233 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 G SDH PV + L Sbjct: 234 YKDILG----SDHCPVGLEL 249 >gi|319780773|ref|YP_004140249.1| exodeoxyribonuclease III Xth [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166661|gb|ADV10199.1| exodeoxyribonuclease III Xth [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 268 Score = 179 bits (455), Expect = 3e-43, Method: Composition-based stats. Identities = 76/266 (28%), Positives = 121/266 (45%), Gaps = 9/266 (3%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64 +ATWN+NS+R R+ + + E+ PD++CLQETK D+ FP + + L Y HI GQK Sbjct: 5 IATWNINSVRLRMPIVERLLVEHAPDVLCLQETKVPDELFPEKAFRKLGYEHIAFHGQKG 64 Query: 65 YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124 Y+GVA +++ + + +R + T + + + N Y+P G Sbjct: 65 YHGVATVARRPIELVEKRRFCE--IEDSRHLSVTVRAGGKAILLHNFYVPAGGDEPDPVI 122 Query: 125 DDKISWIKRFLRFASQRLELEEPLI---FAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + K F+ + + + GD NI P HD ++ N T + Sbjct: 123 NRKFKHKLDFVAEMNAIRAEHDEVSGSVLVGDLNIAPLEHDVWSHKQLLNVVSHTPVETE 182 Query: 182 SFQKLQNMGFTDAIRATH--DTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHS 238 +F+ ++ G + + D LY++W Y A W N+G R+DH+ SP Sbjct: 183 NFEAMRRAGNWVDLMRLNVPDEQKLYTWWSYRAQDWELSNRGRRLDHVWSSPNLVPSFSG 242 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIP 264 I RGW +PSDH PVI D+ Sbjct: 243 YEILRLARGWERPSDHVPVIARFDLD 268 >gi|257455364|ref|ZP_05620599.1| exodeoxyribonuclease III [Enhydrobacter aerosaccus SK60] gi|257447326|gb|EEV22334.1| exodeoxyribonuclease III [Enhydrobacter aerosaccus SK60] Length = 270 Score = 179 bits (455), Expect = 3e-43, Method: Composition-based stats. Identities = 86/266 (32%), Positives = 125/266 (46%), Gaps = 9/266 (3%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64 ++N+N +RAR H L A PD+I LQETK D FP +++Q L YH+E GQKS Sbjct: 3 RFVSFNINGLRARPHQLEAIRDIIAPDVIGLQETKVHDDAFPLQSVQQLGYHVEFFGQKS 62 Query: 65 YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-TK 123 + GVA+LS+ +PI + P D D Q RFI A + N + + + N Y P G TK Sbjct: 63 HYGVALLSRQKPIFVQKGFPTDSDDAQRRFIHARYDFNGKYIDVLNGYFPQGENRKHETK 122 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY------NPIIWENDACFTL 177 + K + + Q +I GD NI P D + F Sbjct: 123 FPMKRKFYADLTDYILQLKAENRSMILMGDMNIAPLDFDIGISEDSVKRWLKNGTCSFLP 182 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK--NKGIRIDHIMLSPEATSL 235 E R+ +Q L D RA + S++DY + + +G+RIDHI+++P+ Sbjct: 183 EEREWYQALLATDLHDTYRALYADGQALSWFDYRSKGFDDEPKRGLRIDHILMTPDLADK 242 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 L+ A + R KPSDH P+ Sbjct: 243 LNGAGVSYDLRAMEKPSDHAPIWADF 268 >gi|255536052|ref|YP_003096423.1| Exodeoxyribonuclease III [Flavobacteriaceae bacterium 3519-10] gi|255342248|gb|ACU08361.1| Exodeoxyribonuclease III [Flavobacteriaceae bacterium 3519-10] Length = 254 Score = 179 bits (455), Expect = 3e-43, Method: Composition-based stats. Identities = 73/263 (27%), Positives = 122/263 (46%), Gaps = 14/263 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC-- 60 + + ++NVN IRA N W++ +PDIIC+QE+K + E+ + + YH Sbjct: 1 MKIISYNVNGIRAAFTKNFVGWLEVADPDIICIQESKAGNDQIDIESFEKIGYHSYWHSA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GV I SK +P + + D + R I A F + ++Y+P + I Sbjct: 61 QKKGYSGVGIASKIKPNYVEYGCGIEHYDSEGRIIRADFD----DFSVISVYVPSASNIE 116 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EV 179 K+ + FL++ + LI +GD+NI +P D +NP +N + F E Sbjct: 117 R--LGYKMEFCYDFLQYIKNLKKTIPNLIISGDFNICHKPIDIHNPEGLKNASGFLPIER 174 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + + D+ R +D Y++W Y +S +NKG R+D+ +S L A Sbjct: 175 EWLSKFIDECELIDSFRYFNDQPDYYTWWSYRQNSRERNKGWRLDYNFVSNSLKEKLSRA 234 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 I + SDH PV+V + Sbjct: 235 VILKEV----FHSDHCPVLVEIK 253 >gi|160945969|ref|ZP_02093195.1| hypothetical protein FAEPRAM212_03502 [Faecalibacterium prausnitzii M21/2] gi|158443700|gb|EDP20705.1| hypothetical protein FAEPRAM212_03502 [Faecalibacterium prausnitzii M21/2] gi|295103228|emb|CBL00772.1| exodeoxyribonuclease III [Faecalibacterium prausnitzii SL3/3] Length = 250 Score = 179 bits (455), Expect = 3e-43, Method: Composition-based stats. Identities = 65/263 (24%), Positives = 108/263 (41%), Gaps = 16/263 (6%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60 + + +WNVN +RA + H A + DI +QETK + Y + + Sbjct: 1 MKLISWNVNGLRACLTHGFAESFAALDADIFSVQETKMQPGQ---ADFAPEGYTEYTYSA 57 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+G A K P+ + T + + D + R + + + Sbjct: 58 EKKGYSGTACWCKTAPLAVTTGIGLEQHDHEGRVLTLEYPGFYL-----VNCYTPNSQDG 112 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + D ++ W F + L+ ++P+I GD N+ D N A FT + R Sbjct: 113 LKRLDYRMEWEDAFRAYLLA-LDAKKPVILCGDLNVAHTEMDIKNAKTNRMSAGFTDQER 171 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 +L GF D+ R H YS+W Y + KN G RID+ ++S + +A Sbjct: 172 AKMTELLAAGFADSFRVVHPDEVKYSWWSYRFHAREKNAGWRIDYFIVSRRIADRIRAAE 231 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263 I + G SDH PV + +D+ Sbjct: 232 IHNEIFG----SDHCPVELQIDL 250 >gi|302524148|ref|ZP_07276490.1| exodeoxyribonuclease III [Streptomyces sp. AA4] gi|302433043|gb|EFL04859.1| exodeoxyribonuclease III [Streptomyces sp. AA4] Length = 282 Score = 179 bits (455), Expect = 3e-43, Method: Composition-based stats. Identities = 58/272 (21%), Positives = 110/272 (40%), Gaps = 13/272 (4%) Query: 3 VVTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 V+ V+T NVN +RA + W+ D++ QE + E P + + Sbjct: 15 VLIVSTVNVNGLRAAVKKGFVEWLAATEADVVACQEVRAEAAQLPASVVAPEGWFAAHAP 74 Query: 62 --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 K NGV++ S+ +P E+ T + + R++E + + Sbjct: 75 SVVKGRNGVSLYSRVEPDEVRTGFGEPEFEDSGRYLEMHLPG-----VVVASLYLPSGDV 129 Query: 120 TSTKYDDKISWIKRFLRF----ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + + D+K ++ FL + ++ ++ GD+NI D N + ++ F Sbjct: 130 GTERQDEKERFMDAFLPYLVELRAKSAAEGREVVVVGDWNIAYDTVDLKNWRGNQKNSGF 189 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R+ ++ G+TD R Y++W Y ++ + G RID + +P Sbjct: 190 LPEEREWMGRVYEAGYTDVQRRLDPEGPGPYTWWSYRGKAFDNDSGWRIDCQLATPGLAE 249 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDIPEP 266 + S ++ + SDH PV + D+P P Sbjct: 250 KVKSVVVERAESYDQRWSDHAPVTATYDVPFP 281 >gi|258515007|ref|YP_003191229.1| exodeoxyribonuclease III [Desulfotomaculum acetoxidans DSM 771] gi|257778712|gb|ACV62606.1| exodeoxyribonuclease III [Desulfotomaculum acetoxidans DSM 771] Length = 259 Score = 179 bits (455), Expect = 3e-43, Method: Composition-based stats. Identities = 84/262 (32%), Positives = 134/262 (51%), Gaps = 5/262 (1%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 A++N+NSIRAR L W+ ++ PD++CLQETK DK+FP + + + Y+ GQ Sbjct: 2 TFKAASFNINSIRARKELLINWLLQSKPDLLCLQETKVMDKDFPVQDFRDIGYNTLFKGQ 61 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 KSYNGVAILS + + + L +AR + A + + N Y+P G S Sbjct: 62 KSYNGVAILSPHDLTRVDSDLGEAAEPGEARLLAAQVKG----IYVVNTYIPQGQDPKSP 117 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K+ K++WI+ + ++ E+P+++ GD+N+ P+P D ++P F E + Sbjct: 118 KFIHKLNWIRAMRDYFTRNFTPEQPVLWLGDFNVAPEPIDIHDPKRLLGHVGFHPEEHKV 177 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYY-ADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 ++ GF D R Y+FWDY +N G R+DHI + + + Sbjct: 178 LAHVKEWGFQDIFRKHKPEGGHYTFWDYRVPRGVERNLGWRVDHIWGTRAIADRSMDSWV 237 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 D +PR KPSDHT ++ +I Sbjct: 238 DIEPRKLEKPSDHTFIMAEFNI 259 >gi|239833024|ref|ZP_04681353.1| exodeoxyribonuclease III (xth) [Ochrobactrum intermedium LMG 3301] gi|239825291|gb|EEQ96859.1| exodeoxyribonuclease III (xth) [Ochrobactrum intermedium LMG 3301] Length = 268 Score = 179 bits (455), Expect = 3e-43, Method: Composition-based stats. Identities = 77/266 (28%), Positives = 123/266 (46%), Gaps = 9/266 (3%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64 VATWN+NS+R R+ + ++++ PD++CLQETK D FP + ++L Y HI GQK Sbjct: 5 VATWNINSVRLRMPLVEQFLRDYQPDVLCLQETKCPDNLFPSKGFRALGYEHIAISGQKG 64 Query: 65 YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124 Y+GVA +SK + G R + A + LRI N Y+P G + Sbjct: 65 YHGVATVSKRPLTGVEK--IGFCDMGDCRHLSAVVEAGGKKLRIHNFYVPAGGDEPDPQI 122 Query: 125 DDKISWIKRF---LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180 + K + F +R + + GD NI P +D ++ T E Sbjct: 123 NPKFAHKLAFLEEMRAIVADRQDGHSSVLVGDLNIAPLENDVWSHKQLLKIVSHTPIETE 182 Query: 181 QSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLLHS 238 G++D +R ++++W Y A W ++G R+DH+ S + + Sbjct: 183 TLEDLRVKGGWSDLMRQLIPADQKIFTWWSYRAKDWAESDRGRRLDHVWGSGDLEQHIQG 242 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIP 264 +I RGW +PSDH PVI + ++ Sbjct: 243 LQILRDARGWDRPSDHVPVIATFNLD 268 >gi|183221215|ref|YP_001839211.1| exodeoxyribonuclease [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911306|ref|YP_001962861.1| exodeoxyribonuclease III [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167775982|gb|ABZ94283.1| Exodeoxyribonuclease III [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779637|gb|ABZ97935.1| Exodeoxyribonuclease [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 256 Score = 179 bits (455), Expect = 3e-43, Method: Composition-based stats. Identities = 74/262 (28%), Positives = 118/262 (45%), Gaps = 13/262 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC-- 60 + + T N N IR+ + L +I+ NPDI+C QETK K E + L Y + Sbjct: 1 MKIITLNCNGIRSSLSKGLLDFIRHENPDILCFQETKAPGKEIDREEFRHLGYEVYFSLA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + Y+G A+L+K +P ++ + R + F Q + NLY P G Sbjct: 61 EKPGYSGTAVLTKQKPKQVTIGFGDGIFRSEGRSVFLEF----QDFYLWNLYFPSG-TSG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K ++ F L+ ++PL+ GD NI D +NP +N++ F R Sbjct: 116 EERQKVKYQFLDEFTELTKPFLKKKKPLLICGDVNIAHTEMDIHNPKGNQNNSGFLPAER 175 Query: 181 QSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + F +GF D R H YS+W Y + NKG RID+ ++ + L +A Sbjct: 176 KWFTDFLELGFFDCFRTIHPDVLDEYSWWTYRFQARKNNKGWRIDYFFVTKSKSVRLQTA 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261 +I +P SDH PV++ + Sbjct: 236 KIAKEP----VMSDHAPVVLEI 253 >gi|306843439|ref|ZP_07476040.1| exodeoxyribonuclease III [Brucella sp. BO1] gi|306276130|gb|EFM57830.1| exodeoxyribonuclease III [Brucella sp. BO1] Length = 268 Score = 179 bits (455), Expect = 3e-43, Method: Composition-based stats. Identities = 75/266 (28%), Positives = 122/266 (45%), Gaps = 9/266 (3%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64 +ATWN+NS+R R+ + ++++ PD++CLQETK D FP + ++L Y HI GQK Sbjct: 5 IATWNINSVRLRMPLVEQFLRDYQPDVLCLQETKCPDDQFPAKGFRALGYEHIAISGQKG 64 Query: 65 YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124 Y+GVA +S+ + R + A + LRI N Y+P G Sbjct: 65 YHGVATVSRRPLDGVEK--VDFCNMGDCRHLSAVVEAGDRKLRIHNFYVPAGGDEPDPAI 122 Query: 125 DDKISWIKRF---LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180 + K + F +R + + GD NI P +D ++ T E Sbjct: 123 NPKFAHKLAFLEEMRAIIADRKDGCSSLLVGDLNIAPLENDVWSHKQLLKIVSHTPIETE 182 Query: 181 QSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHS 238 G++D +R ++++W Y A W ++G R+DH+ S + S + Sbjct: 183 TLEDLRIKGGWSDLMRHLIAADQKIFTWWSYRAKDWDAADRGRRLDHVWGSADLESHIKG 242 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIP 264 ++ RGW +PSDH PVI + D+ Sbjct: 243 LQVLRDARGWDRPSDHVPVIATFDLD 268 >gi|256787199|ref|ZP_05525630.1| exodeoxyribonuclease (secreted protein) [Streptomyces lividans TK24] Length = 267 Score = 179 bits (455), Expect = 3e-43, Method: Composition-based stats. Identities = 53/267 (19%), Positives = 100/267 (37%), Gaps = 8/267 (2%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++TV + NVN +RA W+ + D++CLQE + E P +H+ Sbjct: 1 MLTVTSVNVNGLRAAAKKGFVEWLAGTSADVLCLQEVRAEPHQLPDHAGAPEGWHVTHAP 60 Query: 62 Q--KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 K GV++ ++ +P + + D R++EA T + G Sbjct: 61 AAAKGRAGVSLYTRREPDAVRVGFGSTEFDTSGRYVEADLPGVTVA-SLYLPSGEVGTER 119 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K ++ + ++ GD+NI + D N + ++ F E Sbjct: 120 QDEKVRFMGEFLAYLKELRERAAAEGREVVVCGDWNIAHREADLKNWRANKKNSGFLPEE 179 Query: 180 RQSFQKLQNMGFTDAIRA----THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 R+ ++ + + D YS+W Y ++ + G RID+ + +P + Sbjct: 180 REWLGRVLDPAEGGYVDVVRALHPDVEGPYSWWSYRGRAFDNDAGWRIDYHVSTPGLAAK 239 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262 ++ + SDH PV V D Sbjct: 240 AVKGYVERAATHAERWSDHAPVTVVYD 266 >gi|171321052|ref|ZP_02910036.1| exodeoxyribonuclease III Xth [Burkholderia ambifaria MEX-5] gi|171093687|gb|EDT38835.1| exodeoxyribonuclease III Xth [Burkholderia ambifaria MEX-5] Length = 257 Score = 179 bits (455), Expect = 3e-43, Method: Composition-based stats. Identities = 60/264 (22%), Positives = 110/264 (41%), Gaps = 14/264 (5%) Query: 3 VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59 ++ V T N+N IR A W+ E N D +C+QE K + P E ++ + Sbjct: 1 MMRVITANLNGIRSAAKKGFFEWLGEQNADCVCVQEIKVSADDLPAEFVEPHGLRSYFHH 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G + S+ +P +++ + D + R++EA + L + ++Y+P G+ Sbjct: 61 AEKKGYSGAGMYSRREPDDVIIGFGSSEFDAEGRYVEARYG----KLSVVSVYVPSGSSG 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + L+ + +I GD NI+ + D N + ++ E Sbjct: 117 EERQQA--KYRFMDEFMPHLAELKSKREVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEE 174 Query: 180 RQSFQK-LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R + ++G+ D R Y++W +++KN G RID+ + +P Sbjct: 175 RAWLTQLFDDVGYVDVFRTLDPRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGVAGTAKR 234 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 I K SDH P+ V D Sbjct: 235 TSIFKDI----KFSDHAPLTVDYD 254 >gi|58580132|ref|YP_199148.1| exodeoxyribonuclease III [Xanthomonas oryzae pv. oryzae KACC10331] gi|58424726|gb|AAW73763.1| exodeoxyribonuclease III [Xanthomonas oryzae pv. oryzae KACC10331] Length = 285 Score = 179 bits (455), Expect = 3e-43, Method: Composition-based stats. Identities = 63/275 (22%), Positives = 106/275 (38%), Gaps = 24/275 (8%) Query: 2 SVVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 S + + ++N N +R A AW + D++C+QETK ++ Y Sbjct: 18 SSMRIISFNANGLRSAASKGFFAWFAAQDADVLCVQETKAQEHQLAGPDFLPTGYKAWFR 77 Query: 61 G---QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 +K Y+GVAI S+++P E+ T L + D + R+IEA F R + Sbjct: 78 DASTKKGYSGVAIYSRHEPDEVRTALGWPEFDEEGRYIEARFGN-----RSVVSFYIPSG 132 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + K ++ + L + GD+NI+ D N + ++ Sbjct: 133 SSGELRQGYKFQVMQWLRPILDEWLASGRQYVLCGDWNIVRTALDIKNWKSNQKNSGCLP 192 Query: 178 EVRQSFQKLQN-----------MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226 R L G+ D+ R H Y++W + + N G RID+ Sbjct: 193 PERDWLNGLCADVPDDANAAEGRGWVDSYRVLHPQGQDYTWWSNRGAARTNNVGWRIDYQ 252 Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +++P L + I + R SDH P IV Sbjct: 253 LVTPGLRDTLRACSIYREER----FSDHAPYIVDY 283 >gi|317179707|dbj|BAJ57495.1| exodeoxyribonuclease [Helicobacter pylori F30] Length = 250 Score = 179 bits (455), Expect = 3e-43, Method: Composition-based stats. Identities = 69/260 (26%), Positives = 115/260 (44%), Gaps = 13/260 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + + D+ C+QE+K + + FE + + Sbjct: 1 MKLISWNVNGLRACMTKGFMDFFNSVDADVFCIQESKMQQEQNTFE-FKGYFDFWNCAIK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+GV +K +P+ + + ++ D + R + F + + N+Y P+ S Sbjct: 60 KGYSGVVTFTKKEPLSVSYGINMEEHDKEGRVVTCEFE----SFYLVNVYTPNSQQALSR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 ++ R + LEL++P+I GD N+ D NP +A F+ E R Sbjct: 116 LSYRMSWEVE--FRKFLKVLELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L N GF D R + Y++W Y + KN G RID+ + S + L A I Sbjct: 174 FNELLNAGFIDTFRYFYPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALI 233 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 G SDH PV + L Sbjct: 234 YKDILG----SDHCPVGLEL 249 >gi|224534803|ref|ZP_03675375.1| exodeoxyribonuclease III [Borrelia spielmanii A14S] gi|224514051|gb|EEF84373.1| exodeoxyribonuclease III [Borrelia spielmanii A14S] Length = 255 Score = 179 bits (455), Expect = 3e-43, Method: Composition-based stats. Identities = 60/260 (23%), Positives = 106/260 (40%), Gaps = 12/260 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCG 61 + + +WNVN IRA + +++E PDI+C+QETK + P + + Y + Sbjct: 1 MKLISWNVNGIRAVLKKGFLEFVREYTPDILCVQETKALREQLPSDLILENYYSYFSKSK 60 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 K Y+GV I SK +PI + L + E I + + + Sbjct: 61 IKGYSGVCIYSKVKPIAVN------LLGKEIFDNEGRGLIAYYSDFVLINGYFPNSQALR 114 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + K+ ++ + + ++ GD+NI D +P + + +E Sbjct: 115 RRLVYKLDFLSYVENLVDSFVNGGKNVVICGDFNIAHTKIDLISPDSNRDSPGYYIEETT 174 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 + N G+ D R + Y++W Y + KN G RID+ +++ + + I Sbjct: 175 WLDRFLNKGYVDTFRIFNKEPGYYTWWSYRTRAREKNMGWRIDYFIVNEFFKRNVKKSLI 234 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 K G SDH PV + L Sbjct: 235 LDKVMG----SDHCPVCLEL 250 >gi|308175792|ref|YP_003922497.1| apurinic/apyrimidinic endonuclease [Bacillus amyloliquefaciens DSM 7] gi|307608656|emb|CBI45027.1| apurinic/apyrimidinic endonuclease [Bacillus amyloliquefaciens DSM 7] gi|328555768|gb|AEB26260.1| apurinic/apyrimidinic endonuclease [Bacillus amyloliquefaciens TA208] gi|328914157|gb|AEB65753.1| apurinic/apyrimidinic endonuclease [Bacillus amyloliquefaciens LL3] Length = 252 Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats. Identities = 73/263 (27%), Positives = 125/263 (47%), Gaps = 14/263 (5%) Query: 4 VTVATWNVNSIRARIHNLA--AWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + +WNVN +RA + + ++E DI+CLQETK +D + + + + Sbjct: 1 MKLISWNVNGLRAVMKKIDINTCLQETKADILCLQETKVQDGQVSLQP-EGYHDYWNYAV 59 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G A+ SK +P+++ L DD D + R I F Sbjct: 60 KKGYSGTAVFSKVKPLQVSYGLGIDDHDQEGRVITLEFEN-----VFVVNCYTPNAKRGL 114 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + D ++ W + Q+L+ ++P+I GD N+ + D NP +A F+ + R+ Sbjct: 115 ERIDYRLQWE-ADFKDYLQKLDQKKPVILCGDLNVAHREIDLKNPKANRKNAGFSDQERE 173 Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 +F L N GFTD+ R + YS+W Y ++ KN G R+D++++S + A Sbjct: 174 AFSVLLNAGFTDSFRYLYPDQEGAYSWWSYRTNAREKNIGWRLDYVIVSDRLKQRITQAA 233 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263 I G SDH PV ++LD+ Sbjct: 234 ICADIMG----SDHCPVEMTLDL 252 >gi|328883057|emb|CCA56296.1| Exodeoxyribonuclease III [Streptomyces venezuelae ATCC 10712] Length = 276 Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats. Identities = 53/266 (19%), Positives = 99/266 (37%), Gaps = 8/266 (3%) Query: 5 TVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ- 62 TV + NVN +RA W+ + D +CLQE + E+ P E + Sbjct: 12 TVTSVNVNGLRAAAKKGFVEWLAGTSADAVCLQEVRAEEAQLPAEVRAPEGWFTVHAPAA 71 Query: 63 -KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 K GV++ ++ +P + + D R++EA T + G Sbjct: 72 AKGRAGVSLYTRREPDRVRVGFGSSEFDGSGRYVEADLPGVTVA-SLYLPSGEAGTERQD 130 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 KY ++ ++ ++ GD+NI + D N + +A F E R+ Sbjct: 131 EKYRFMGEFLPYLKELRTRAAADGREVVVCGDWNIAHREADLKNWRANKKNAGFLPEERE 190 Query: 182 SFQKLQNM----GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 ++ + + YS+W Y ++ + G RID+ + +P + Sbjct: 191 WLGRVLDEADGAYVDVVRALHPEQEGPYSWWSYRGRAFDNDTGWRIDYQIATPGLAAKAV 250 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263 ++ + SDH PV V ++ Sbjct: 251 KGYVERAATHAERWSDHAPVTVVYEL 276 >gi|182677440|ref|YP_001831586.1| exodeoxyribonuclease III Xth [Beijerinckia indica subsp. indica ATCC 9039] gi|182633323|gb|ACB94097.1| exodeoxyribonuclease III Xth [Beijerinckia indica subsp. indica ATCC 9039] Length = 272 Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats. Identities = 82/272 (30%), Positives = 118/272 (43%), Gaps = 11/272 (4%) Query: 4 VTV--ATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETC 60 + + ATWN+NS+R RI + ++ E PD++CLQETK D FP L Y HI Sbjct: 1 MRLSLATWNINSVRLRIDLVTRFLTEQAPDVLCLQETKCRDSEFPLAAFHKLGYSHIAIN 60 Query: 61 GQKSYNGVAILSKYQPIEI-VTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 GQK Y+GVAI+SK E T + + + N Y+P G Sbjct: 61 GQKGYHGVAIVSKIPFAESGKRDFCAKGDARHITVTLLPETTPARPINLHNFYVPAGGDE 120 Query: 120 T----STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + K+ K++++ + L I GD NI P D ++ Sbjct: 121 PDPEINPKFAHKLAFLDEMAEWMRTDLIAHRDAIIVGDLNIAPLETDVWSHKALLKVVSH 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATH--DTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEA 232 T + ++ N G H LY++W Y + WSK +KG R+DHI +S Sbjct: 181 TPIEVEKLGRVINAGPWIDALRHHVPPEEKLYTWWSYRSPDWSKADKGRRLDHIWVSASL 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 L I RGW +PSDH PV V L++ Sbjct: 241 KQHLDGLTILRDSRGWDRPSDHVPVTVQLNLD 272 >gi|208435390|ref|YP_002267056.1| exodeoxyribonuclease [Helicobacter pylori G27] gi|208433319|gb|ACI28190.1| exodeoxyribonuclease [Helicobacter pylori G27] Length = 250 Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats. Identities = 69/260 (26%), Positives = 115/260 (44%), Gaps = 13/260 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + + D+ C+QE+K + + FE + + Sbjct: 1 MKLISWNVNGLRACMTKGFMDFFNSVDADVFCIQESKMQQEQNTFE-FKGYFDFWNCAIK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+GV +K +P+ + + ++ D + R + F + + N+Y P+ S Sbjct: 60 KGYSGVVTFTKKEPLSVSYGINMEEHDKEGRVVTCEFE----SFYLVNVYTPNSQQALSR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 ++ R + LEL++P+I GD N+ D NP +A F+ E R Sbjct: 116 LSYRMSWEVE--FRKFLKALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L N GF D R + Y++W Y + KN G RID+ + S + L A I Sbjct: 174 FSELLNAGFIDTFRYFYPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALI 233 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 G SDH PV + L Sbjct: 234 YKDILG----SDHCPVGLEL 249 >gi|218781643|ref|YP_002432961.1| exodeoxyribonuclease III Xth [Desulfatibacillum alkenivorans AK-01] gi|218763027|gb|ACL05493.1| exodeoxyribonuclease III Xth [Desulfatibacillum alkenivorans AK-01] Length = 253 Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats. Identities = 63/263 (23%), Positives = 121/263 (46%), Gaps = 13/263 (4%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59 ++ +WNVN IRA +K+ N DI+ +QET+ + + + +Y + + Sbjct: 1 MLKFVSWNVNGIRAVEKKGFTDMVKDFNADILAIQETRALKEQLSEDLINIADYTSYWFS 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GV++ +K P++++ + + D + R I + + N+Y P+ P Sbjct: 61 AEKKGYSGVSVYTKQTPLDVMYGMDSPEHDAEGRVITLEYD----DFYLMNVYFPNAQPK 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 D + L + L ++ ++ GDYN+ +P D NP E + ++ E Sbjct: 117 LVRL--DWKLGFNQTLHKFANALGEKKSVVLCGDYNVAHKPIDLANPKQNEQNPGYSPEE 174 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R + G+ DA R + Y++W Y ++ +KN G RID+ + ++ + +A Sbjct: 175 RAWMDEFIGSGYVDAFRMFNQEPDNYTWWSYRFNARAKNIGWRIDYFCVDEKSKGRVKNA 234 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 I + G SDH PV + + Sbjct: 235 EILNEVMG----SDHCPVSLDFE 253 >gi|108563814|ref|YP_628130.1| exodeoxyribonuclease III [Helicobacter pylori HPAG1] gi|107837587|gb|ABF85456.1| exodeoxyribonuclease [Helicobacter pylori HPAG1] Length = 250 Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats. Identities = 68/260 (26%), Positives = 115/260 (44%), Gaps = 13/260 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + + D+ C+QE+K + + FE + + Sbjct: 1 MKLISWNVNGLRACMTKGFMDFFNSVDADVFCIQESKMQQEQNTFE-FRGYFDFWNCAIK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+GV +K +P+ + + ++ D + R + F + + N+Y P+ S Sbjct: 60 KGYSGVVTFTKKEPLSVSYGINIEEHDKEGRVVTCEFE----SFYLVNVYTPNSQQALSR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 ++ + + LEL++P+I GD N+ D NP +A F+ E R Sbjct: 116 LSYRMSWEVE--FKKFLKALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L N GF D R + Y++W Y + KN G RID+ + S + L A I Sbjct: 174 FSELLNAGFIDTFRYFYPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALI 233 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 G SDH PV + L Sbjct: 234 YKDILG----SDHCPVGLEL 249 >gi|257881925|ref|ZP_05661578.1| AP endonuclease [Enterococcus faecium 1,231,502] gi|257890085|ref|ZP_05669738.1| AP endonuclease [Enterococcus faecium 1,231,410] gi|258615657|ref|ZP_05713427.1| exodeoxyribonuclease [Enterococcus faecium DO] gi|260558703|ref|ZP_05830892.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Enterococcus faecium C68] gi|293563951|ref|ZP_06678361.1| exodeoxyribonuclease III [Enterococcus faecium E1162] gi|294617705|ref|ZP_06697329.1| exodeoxyribonuclease III [Enterococcus faecium E1679] gi|294623736|ref|ZP_06702567.1| exodeoxyribonuclease III [Enterococcus faecium U0317] gi|257817583|gb|EEV44911.1| AP endonuclease [Enterococcus faecium 1,231,502] gi|257826445|gb|EEV53071.1| AP endonuclease [Enterococcus faecium 1,231,410] gi|260075162|gb|EEW63475.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Enterococcus faecium C68] gi|291596042|gb|EFF27311.1| exodeoxyribonuclease III [Enterococcus faecium E1679] gi|291596861|gb|EFF28081.1| exodeoxyribonuclease III [Enterococcus faecium U0317] gi|291604080|gb|EFF33604.1| exodeoxyribonuclease III [Enterococcus faecium E1162] Length = 250 Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats. Identities = 70/261 (26%), Positives = 112/261 (42%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + N E + D CLQETK + + L + + Sbjct: 1 MKFISWNVNGLRAIVNKNFLEVFHELDADFFCLQETKLQAGQIDLD-LPGYYQYWNYAER 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K + + D D + R I ++ + Sbjct: 60 KGYSGTAIFAKKPALNATYGMGIDIHDTEGRLITLEYSDF-----FLVTCYTPNSQSELK 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + D ++ W + F + L+ ++P+I GD N+ Q D N + +A FT E R + Sbjct: 115 RLDYRLEWEEAFYNYLEN-LKKQKPVIVCGDLNVAHQKIDLKNWKTNQKNAGFTPEERAA 173 Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +L + GF D R + +YS+W+Y +S N G RID+ + S + L A+I Sbjct: 174 LSRLLDNGFIDTFRYFYPTQEGVYSWWNYRFNSRKNNAGWRIDYFLTSKDLEPGLADAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 T G SDH PV + L Sbjct: 234 HTDIMG----SDHCPVELDLK 250 >gi|304394302|ref|ZP_07376225.1| exodeoxyribonuclease III protein [Ahrensia sp. R2A130] gi|303293742|gb|EFL88119.1| exodeoxyribonuclease III protein [Ahrensia sp. R2A130] Length = 269 Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats. Identities = 80/263 (30%), Positives = 122/263 (46%), Gaps = 8/263 (3%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64 +ATWN+NS+R RI + ++ E+ PD++CLQE K ++ FP + + Y H GQK Sbjct: 7 IATWNINSVRLRIGLVEKFLAEHQPDVLCLQEIKCVNELFPADAFTAAGYPHHAVHGQKG 66 Query: 65 YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124 Y+GVA +SK+ E + R +E +R+ N Y+P G + Sbjct: 67 YHGVATVSKHPLTETAS--ADYVAMGDTRHVECIVQSPGGPVRMHNFYVPAGGDVADPAV 124 Query: 125 DDKISWIKRFLRFAS--QRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVRQ 181 + K +F+ + + P I GD NI P D ++ T E Sbjct: 125 NPKFDHKMKFIEEMKALGCDDGDVPAILVGDLNIAPLETDVWSHKQLLKVVSHTPVETDG 184 Query: 182 SFQKLQNMGFTDAIRATHDTHHL-YSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHSA 239 + + G+TD IR + +++W Y + W +KG R+DHI SP+ S L Sbjct: 185 LNEVMAKGGWTDLIRQHIPAEDILFTWWSYRSKDWDAADKGRRLDHIWSSPKLASSLSKI 244 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 + + RGW KPSDH PVI D Sbjct: 245 EVLREARGWEKPSDHVPVIARFD 267 >gi|217034282|ref|ZP_03439699.1| hypothetical protein HP9810_885g13 [Helicobacter pylori 98-10] gi|216943254|gb|EEC22719.1| hypothetical protein HP9810_885g13 [Helicobacter pylori 98-10] Length = 250 Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats. Identities = 69/260 (26%), Positives = 116/260 (44%), Gaps = 13/260 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + + D+ C+QE+K + + FE + + Sbjct: 1 MKLISWNVNGLRACMTKGFMDFFNSVDADVFCIQESKMQQEQNTFE-FKGYFDFWNCAIK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+GV +K +P+ + + ++ D + R + F + + N+Y P+ S Sbjct: 60 KGYSGVVTFTKKEPLSVSYGINMEEHDKEGRVVTCEFE----SFYLVNVYTPNSQQALSR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 ++ R + LEL++P+I GD N+ D NP +A F+ E R+ Sbjct: 116 LSYRMSWEVE--FRKFLKALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L N GF D R + Y++W Y + KN G RID+ + S + L A I Sbjct: 174 FNELLNAGFIDTFRYFYPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALI 233 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 G SDH PV + L Sbjct: 234 YKDILG----SDHCPVGLEL 249 >gi|109946643|ref|YP_663871.1| exodeoxyribonuclease III [Helicobacter acinonychis str. Sheeba] gi|109713864|emb|CAJ98872.1| exodeoxyribonuclease [Helicobacter acinonychis str. Sheeba] Length = 250 Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats. Identities = 75/260 (28%), Positives = 119/260 (45%), Gaps = 13/260 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + + DI C+QE+K + + FE + + Sbjct: 1 MKLISWNVNGLRACMTKGFMDFFNSVDADIFCIQESKMQQEQNTFE-FKGYFDFWNCAIK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+GV +K +P+ + + ++ D + R I F + + N+Y P+ S Sbjct: 60 KGYSGVVTFTKKEPLSVSYGINIEEHDKEGRIITCEFE----SFYLVNIYTPNSQQALSR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + ++SW F RF LEL++P+I GD N+ D NP +A F+ E R Sbjct: 116 -LNYRMSWEVEFRRFLKA-LELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L N GF D R + Y++W Y + KN G RID+ + S + L A I Sbjct: 174 FNELLNTGFIDTFRYFYPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNSLKTRLKDALI 233 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 G SDH PV + L Sbjct: 234 YKDILG----SDHCPVGLEL 249 >gi|325924898|ref|ZP_08186330.1| exodeoxyribonuclease III [Xanthomonas perforans 91-118] gi|325544685|gb|EGD16036.1| exodeoxyribonuclease III [Xanthomonas perforans 91-118] Length = 266 Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats. Identities = 67/273 (24%), Positives = 112/273 (41%), Gaps = 24/273 (8%) Query: 4 VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + ++N N +R A AW + D++C+QETK ++ Y Sbjct: 1 MRIISFNANGLRSAASKGFFAWFAAQDADVLCVQETKAQEHQLAGPDFLPTGYKAWFRDA 60 Query: 62 --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GVAI S+++P E+ T L + D + R+IEA F L + + Y+P G+ Sbjct: 61 STKKGYSGVAIYSRHEPDEVRTALGWPEFDEEGRYIEARFG----NLSVVSFYIPSGS-S 115 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + D K ++ Q L + GD+NI+ D N + ++ Sbjct: 116 GELRQDYKFQVMQWLRPILEQWLASGRQYVLCGDWNIVRTALDIKNWKSNQKNSGCLPPE 175 Query: 180 RQSFQKLQN-----------MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 R L G+ D+ R H Y++W + + N G RID+ ++ Sbjct: 176 RDWLNGLCADAPEDTNPAEGRGWVDSYRVLHPQGQDYTWWSNRGAARANNVGWRIDYQLV 235 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +P L + I + R SDH P IV Sbjct: 236 TPGLRDTLKACSIYREER----FSDHAPYIVDY 264 >gi|69245045|ref|ZP_00603203.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Enterococcus faecium DO] gi|314939354|ref|ZP_07846596.1| exodeoxyribonuclease III [Enterococcus faecium TX0133a04] gi|314944126|ref|ZP_07850782.1| exodeoxyribonuclease III [Enterococcus faecium TX0133C] gi|314949042|ref|ZP_07852404.1| exodeoxyribonuclease III [Enterococcus faecium TX0082] gi|314953542|ref|ZP_07856453.1| exodeoxyribonuclease III [Enterococcus faecium TX0133A] gi|314994499|ref|ZP_07859775.1| exodeoxyribonuclease III [Enterococcus faecium TX0133B] gi|314998115|ref|ZP_07863002.1| exodeoxyribonuclease III [Enterococcus faecium TX0133a01] gi|68196046|gb|EAN10478.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Enterococcus faecium DO] gi|313587883|gb|EFR66728.1| exodeoxyribonuclease III [Enterococcus faecium TX0133a01] gi|313591110|gb|EFR69955.1| exodeoxyribonuclease III [Enterococcus faecium TX0133B] gi|313594421|gb|EFR73266.1| exodeoxyribonuclease III [Enterococcus faecium TX0133A] gi|313597294|gb|EFR76139.1| exodeoxyribonuclease III [Enterococcus faecium TX0133C] gi|313641358|gb|EFS05938.1| exodeoxyribonuclease III [Enterococcus faecium TX0133a04] gi|313644519|gb|EFS09099.1| exodeoxyribonuclease III [Enterococcus faecium TX0082] Length = 269 Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats. Identities = 70/262 (26%), Positives = 113/262 (43%), Gaps = 13/262 (4%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ +WNVN +RA + N E + D CLQETK + + L + Sbjct: 19 LLKFISWNVNGLRAIVNKNFLEVFHELDADFFCLQETKLQAGQIDLD-LPGYYQYWNYAE 77 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G AI +K + + D D + R I ++ + Sbjct: 78 RKGYSGTAIFAKKPALNATYGMGIDIHDTEGRLITLEYSDF-----FLVTCYTPNSQSEL 132 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + D ++ W + F + L+ ++P+I GD N+ Q D N + +A FT E R Sbjct: 133 KRLDYRLEWEEAFYNYLEN-LKKQKPVIVCGDLNVAHQKIDLKNWKTNQKNAGFTPEERA 191 Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + +L + GF D R + +YS+W+Y +S N G RID+ + S + L A+ Sbjct: 192 ALSRLLDNGFIDTFRYFYPTQEGVYSWWNYRFNSRKNNAGWRIDYFLTSKDLEPGLADAK 251 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I T G SDH PV + L Sbjct: 252 IHTDIMG----SDHCPVELDLK 269 >gi|317181208|dbj|BAJ58994.1| exodeoxyribonuclease [Helicobacter pylori F32] Length = 250 Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats. Identities = 69/260 (26%), Positives = 116/260 (44%), Gaps = 13/260 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + + D+ C+QE+K + + FE + + Sbjct: 1 MKLISWNVNGLRACMTKGFMDFFNSVDADVFCIQESKMQQEQNTFE-FKGYFDFWNCAIK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+GV +K +P+ + + ++ D + R + F + + N+Y P+ S Sbjct: 60 KGYSGVVTFTKKEPLSVSYGINMEEHDKEGRVVTCEFE----SFYLVNVYTPNSQQALSR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 ++ R + LEL++P+I GD N+ D NP +A F+ E R+ Sbjct: 116 LSYRMSWEVE--FRKFLKALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L N GF D R + Y++W Y + KN G RID+ + S + L A I Sbjct: 174 FSELLNAGFIDTFRYFYPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALI 233 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 G SDH PV + L Sbjct: 234 YKDILG----SDHCPVGLEL 249 >gi|218231608|ref|YP_002368543.1| exodeoxyribonuclease III [Bacillus cereus B4264] gi|218159565|gb|ACK59557.1| exodeoxyribonuclease III [Bacillus cereus B4264] Length = 252 Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats. Identities = 68/262 (25%), Positives = 121/262 (46%), Gaps = 14/262 (5%) Query: 4 VTVATWNVNSIRARI-HN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + +WNVN +RA I +++E++ DI CLQE K ++ L+ + Sbjct: 1 MKLISWNVNGLRAVIAKGEFLEYLEESSADIFCLQEIKLQEGQIDLN-LEGYYTYWNYAV 59 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G AI SK +P+ + L ++ D + R I F + Sbjct: 60 KKGYSGTAIFSKKEPLSVTYGLDIEEHDQEGRLITLEFEDFYMI-----TLYTPNSKRGL 114 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + D ++ W F + + L+ ++P+IF GD N+ + D NP + F+ E R+ Sbjct: 115 ERLDYRMKWEDDFRSYIKR-LDEKKPVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEERE 173 Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 F + GF D R + YS+W Y + +KN G R+D+ ++S + A+ Sbjct: 174 KFSSILEEGFIDTYRYLYPDQEGAYSWWSYRMGARAKNIGWRLDYFVVSERMKDQITEAK 233 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I+++ G SDH PV + ++ Sbjct: 234 INSEVMG----SDHCPVELHIN 251 >gi|49474726|ref|YP_032768.1| exodeoxyribonuclease III [Bartonella quintana str. Toulouse] gi|49240230|emb|CAF26700.1| Exodeoxyribonuclease III [Bartonella quintana str. Toulouse] Length = 269 Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats. Identities = 78/265 (29%), Positives = 113/265 (42%), Gaps = 9/265 (3%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQK 63 +ATWNVNSIR R+ + ++ D++CLQETK D FP E ++ Y HI GQK Sbjct: 4 RIATWNVNSIRLRLAQVFQYLDLFAADVLCLQETKCPDALFPREAFEAAGYKHIILSGQK 63 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 SYNGVAI+S+ + R+I + +RI N Y+P G + Sbjct: 64 SYNGVAIVSRLPFKNVEKRFFCQ--KQDCRYISVIVEAYGRNIRIHNFYVPAGGDVPDAD 121 Query: 124 YDDKISWIKRF---LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 ++K F + E + + GD NI P D ++ T Sbjct: 122 VNEKFRHKLDFLEEMASIRANQEDDLASLLVGDLNIAPLEDDVWSHQQLLKVVSHTPIET 181 Query: 181 QSFQ--KLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLH 237 + Q Q +Y++W Y A W+ ++G R+DHI SP + Sbjct: 182 ERLQALCCQGGWVDLMRLHFPPPTKIYTWWSYRARDWALADRGRRLDHIWSSPNLAPFVA 241 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLD 262 + I RGW +PSDH PV D Sbjct: 242 NLSIFRDARGWNQPSDHVPVQTVFD 266 >gi|89070627|ref|ZP_01157907.1| exodeoxyribonuclease III, putative [Oceanicola granulosus HTCC2516] gi|89043774|gb|EAR49976.1| exodeoxyribonuclease III, putative [Oceanicola granulosus HTCC2516] Length = 262 Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats. Identities = 75/262 (28%), Positives = 111/262 (42%), Gaps = 6/262 (2%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQK 63 T+ATWN+NS+R R + ++E PD++CLQE K+ + P E +L Y H+ GQ+ Sbjct: 4 TLATWNINSVRLRAPLVLRLLEEEAPDVLCLQECKSPVEKMPLEGFAALGYRHVVARGQR 63 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 YNGVAILSK E+ H + + + + Sbjct: 64 GYNGVAILSKTPIEEVAAHDYASLGHARHIAGRLENGVVVHNFYVPAGGDKPDREVNEK- 122 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVRQS 182 + E E I GD N+ P+ D ++ T EV Sbjct: 123 --FGQKLDYLAAMRDAFHAERPERSILVGDLNVAPREDDVWSHKQLLRVVSHTPVEVNHF 180 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHSARI 241 + G+ D R + LYS+W Y + W +KG R+DH+ S + S H +R+ Sbjct: 181 TDAQEAGGWVDVTRQDIPSGRLYSWWSYRSPDWQAADKGRRLDHVWASADIASAAHGSRV 240 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 RGW +PSDH PV S D+ Sbjct: 241 LRDVRGWEQPSDHVPVFASFDL 262 >gi|188590962|ref|YP_001795562.1| exodeoxyribonuclease iii/endonuclease/phosphatase [Cupriavidus taiwanensis LMG 19424] gi|170937856|emb|CAP62840.1| putative EXODEOXYRIBONUCLEASE III/endonuclease/phosphatase [Cupriavidus taiwanensis LMG 19424] Length = 258 Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats. Identities = 59/266 (22%), Positives = 116/266 (43%), Gaps = 13/266 (4%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IET 59 ++ + + N+N IR+ W+ + + D++C+QE K + + L YH Sbjct: 1 MLRIISANLNGIRSASKKGFFDWMGKQDADMVCVQELKAQAADMTEAFLAPHGYHGFFHY 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GV + ++++P ++T + D + R++E + L + ++Y+P G+ Sbjct: 61 AEKKGYSGVGLYTRHKPERVITGFGNAEFDNEGRYVE----VQYPHLAVISVYVPSGSSG 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K +++ FL Q ++ GD NI + D N ++ F E Sbjct: 117 EERQLA-KFRFLEAFLPHLLQLKASGREIVLCGDVNIAHKEIDIKNWKGNLKNSGFLPEE 175 Query: 180 RQSFQKLQN-MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R +L + G+ D R Y++W +++KN G RID+ + +P+ Sbjct: 176 RAWIGELFDVHGYVDVFRKLDPRPDQYTWWSNRGQAYAKNVGWRIDYHLATPKIADTAQL 235 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIP 264 I K SDH P+ + + P Sbjct: 236 CSIYKD----EKFSDHAPLSIDYNFP 257 >gi|15646134|ref|NP_208316.1| exodeoxyribonuclease III [Helicobacter pylori 26695] gi|2314703|gb|AAD08563.1| exodeoxyribonuclease (lexA) [Helicobacter pylori 26695] Length = 250 Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats. Identities = 69/260 (26%), Positives = 116/260 (44%), Gaps = 13/260 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + + D+ C+QE+K + + FE + + Sbjct: 1 MKLISWNVNGLRACMTKGFMDFFNSVDADVFCIQESKMQQEQNTFE-FKGYFDFWNCAIK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+GV +K +P+ + + ++ D + R I F + + N+Y P+ S Sbjct: 60 KGYSGVVTFTKKEPLSVSYGINMEEHDKEGRVITCEFE----SFYLVNVYTPNSQQALSR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 ++ + + LEL++P+I GD N+ D NP +A F+ E R+ Sbjct: 116 LSYRMSWEVE--FKKFLKALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L N GF D R + Y++W Y + KN G RID+ + S + L A I Sbjct: 174 FSELLNAGFIDTFRYFYPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALI 233 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 G SDH PV + L Sbjct: 234 YKDILG----SDHCPVGLEL 249 >gi|329910713|ref|ZP_08275356.1| Exodeoxyribonuclease III [Oxalobacteraceae bacterium IMCC9480] gi|327546113|gb|EGF31174.1| Exodeoxyribonuclease III [Oxalobacteraceae bacterium IMCC9480] Length = 256 Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats. Identities = 60/264 (22%), Positives = 108/264 (40%), Gaps = 13/264 (4%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IET 59 ++ + N+N IR+ W+ + + D IC+QE K + + E L YH Sbjct: 1 MLKIIAANLNGIRSASKKGFFEWMAKQDADFICVQELKAQAADMSPEMLAPEGYHGYFHY 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G + SK P +++T + D + R+++ + L I ++Y P G+ Sbjct: 61 AEKKGYSGTGVYSKRVPDQVITGFGTPEFDAEGRYVQCDYG----NLSIVSVYCPSGSSG 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + FL + ++ GD+NI Q D N + ++ F E Sbjct: 117 EERQLAKFRFMDV-FLPHLAALKASGREVVICGDWNIAHQEIDLKNWKGNKKNSGFLPEE 175 Query: 180 RQSFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R +L + D R + Y++W +W+ N G RID+ + +P + + Sbjct: 176 RAWLSRLFDEVALVDVFRRVDERAEQYTWWSNRGQAWANNVGWRIDYQIATPGIAATAKA 235 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 I R SDH P+ + D Sbjct: 236 VAIYKDER----FSDHAPLTIEYD 255 >gi|325917542|ref|ZP_08179745.1| exodeoxyribonuclease III [Xanthomonas vesicatoria ATCC 35937] gi|325536258|gb|EGD08051.1| exodeoxyribonuclease III [Xanthomonas vesicatoria ATCC 35937] Length = 266 Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats. Identities = 64/273 (23%), Positives = 108/273 (39%), Gaps = 24/273 (8%) Query: 4 VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + ++N N +R A W + D++C+QETK ++ Y Sbjct: 1 MRIISFNANGLRSAASKGFFDWFATQDADVLCIQETKAQEHQLAGPEFLPAGYKAWFRDA 60 Query: 62 --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GVAI +K P E+ T L + D + R+IEA F L + + Y+P G+ Sbjct: 61 STKKGYSGVAIYAKQAPDEVRTALGWPEFDEEGRYIEARFG----NLSVVSFYIPSGS-S 115 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + D K ++ + L + GD+NI+ D N + ++ Sbjct: 116 GELRQDYKFQVMEWLRPILDEWLASGRQYVLCGDWNIVRTALDIKNWKSNQKNSGCLPPE 175 Query: 180 RQSFQKLQNMG-----------FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 R L + D+ R H Y++W + + N G RID+ ++ Sbjct: 176 RDWLNGLCADTASDASPADGRGWVDSYRVLHPQGEDYTWWSNRGAARANNVGWRIDYQLV 235 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +P L + I + R SDH P IV Sbjct: 236 TPGLRDALQACTIYREQR----FSDHAPYIVDY 264 >gi|261854669|ref|YP_003261952.1| exodeoxyribonuclease III Xth [Halothiobacillus neapolitanus c2] gi|261835138|gb|ACX94905.1| exodeoxyribonuclease III Xth [Halothiobacillus neapolitanus c2] Length = 256 Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats. Identities = 69/262 (26%), Positives = 114/262 (43%), Gaps = 12/262 (4%) Query: 4 VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60 + V ++N N IR A W+ E N D +C+QETK + Y + Sbjct: 1 MRVISFNANGIRSAARKGFFDWLSEQNADFVCIQETKAQADQLTDPEFCPAGYTCQYVSA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GVAI ++ P I+T L + D + R+ + L + +LYLP G+ Sbjct: 61 EKKGYSGVAIYARRSPDAIITQLGLPEFDAEGRYCAFEYP----DLMVASLYLPSGSAGD 116 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + S + +PLI GD+NI + D N + ++ F R Sbjct: 117 HRQESKDRFLAAYLPILESYLQKQHKPLILCGDWNIAHKEIDLKNWKSNQKNSGFLPHER 176 Query: 181 QSFQKLQN-MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 +L + +GF DA R +Y++W A++W N G RID+ +++P+ + A Sbjct: 177 AWLDELFDRLGFVDAHRLVAPGEAVYTWWSNRANAWENNVGWRIDYQIITPDLADRVERA 236 Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261 + K SDH P+I+ Sbjct: 237 TVYRDM----KFSDHAPLIIDY 254 >gi|291457988|ref|ZP_06597378.1| exodeoxyribonuclease III [Oribacterium sp. oral taxon 078 str. F0262] gi|291419320|gb|EFE93039.1| exodeoxyribonuclease III [Oribacterium sp. oral taxon 078 str. F0262] Length = 272 Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats. Identities = 69/269 (25%), Positives = 117/269 (43%), Gaps = 14/269 (5%) Query: 5 TVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +WNVN +RA + + + D+ CLQETK ++ L + + +K Sbjct: 4 KLISWNVNGLRAVLGKTFLSDFHALDADVFCLQETKLQEGQAELS-LPDYHQYWNYAEKK 62 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 Y+G A+ SK +P+ + + + D + R I A F ++ Sbjct: 63 GYSGTALFSKEEPLSVSYGIGIPEHDREGRVISAEFPDCYILTVYVPNSQNELQRLSYRM 122 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + R LE ++P+I+ GD N+ Q D NP ++A FT + R F Sbjct: 123 ------EWEDAFREYILSLEEKKPVIYCGDLNVAHQEIDLKNPASNHHNAGFTDDERAKF 176 Query: 184 QKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 +L + G+ D+ R H YS+W Y + +N G RID+ ++S + + A I Sbjct: 177 SRLLDCGYLDSFRFLHPEERDAYSWWSYRTKARERNVGWRIDYFVVSEKLRERIRGASIH 236 Query: 243 TKPRGWTKPSDHTPVIVSLDI-PEPRKKQ 270 + G SDH PV + L + PE ++ Sbjct: 237 PEIMG----SDHCPVELDLAVCPEGAERA 261 >gi|53717833|ref|YP_106819.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei K96243] gi|53724973|ref|YP_102006.1| exodeoxyribonuclease III [Burkholderia mallei ATCC 23344] gi|67642475|ref|ZP_00441231.1| exodeoxyribonuclease III [Burkholderia mallei GB8 horse 4] gi|76809547|ref|YP_331785.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1710b] gi|121600000|ref|YP_994076.1| exodeoxyribonuclease III [Burkholderia mallei SAVP1] gi|124386596|ref|YP_001028261.1| exodeoxyribonuclease III [Burkholderia mallei NCTC 10229] gi|126438610|ref|YP_001057228.1| exodeoxyribonuclease III [Burkholderia pseudomallei 668] gi|126449280|ref|YP_001081905.1| exodeoxyribonuclease III [Burkholderia mallei NCTC 10247] gi|126452249|ref|YP_001064469.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1106a] gi|134284078|ref|ZP_01770772.1| exodeoxyribonuclease III [Burkholderia pseudomallei 305] gi|167001940|ref|ZP_02267730.1| exodeoxyribonuclease III [Burkholderia mallei PRL-20] gi|167717548|ref|ZP_02400784.1| exodeoxyribonuclease III [Burkholderia pseudomallei DM98] gi|167813690|ref|ZP_02445370.1| exodeoxyribonuclease III [Burkholderia pseudomallei 91] gi|167822205|ref|ZP_02453676.1| exodeoxyribonuclease III [Burkholderia pseudomallei 9] gi|167843799|ref|ZP_02469307.1| exodeoxyribonuclease III [Burkholderia pseudomallei B7210] gi|167892298|ref|ZP_02479700.1| exodeoxyribonuclease III [Burkholderia pseudomallei 7894] gi|167900793|ref|ZP_02487998.1| exodeoxyribonuclease III [Burkholderia pseudomallei NCTC 13177] gi|167909017|ref|ZP_02496108.1| exodeoxyribonuclease III [Burkholderia pseudomallei 112] gi|167917055|ref|ZP_02504146.1| exodeoxyribonuclease III [Burkholderia pseudomallei BCC215] gi|217424907|ref|ZP_03456403.1| exodeoxyribonuclease III [Burkholderia pseudomallei 576] gi|226194644|ref|ZP_03790239.1| exodeoxyribonuclease III [Burkholderia pseudomallei Pakistan 9] gi|237810366|ref|YP_002894817.1| exodeoxyribonuclease III [Burkholderia pseudomallei MSHR346] gi|242317805|ref|ZP_04816821.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1106b] gi|254177087|ref|ZP_04883744.1| exodeoxyribonuclease III [Burkholderia mallei ATCC 10399] gi|254182229|ref|ZP_04888826.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1655] gi|254188156|ref|ZP_04894668.1| exodeoxyribonuclease III [Burkholderia pseudomallei Pasteur 52237] gi|254196563|ref|ZP_04902987.1| exodeoxyribonuclease III [Burkholderia pseudomallei S13] gi|254203686|ref|ZP_04910046.1| exodeoxyribonuclease III [Burkholderia mallei FMH] gi|254208662|ref|ZP_04915010.1| exodeoxyribonuclease III [Burkholderia mallei JHU] gi|254260883|ref|ZP_04951937.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1710a] gi|254295731|ref|ZP_04963188.1| exodeoxyribonuclease III [Burkholderia pseudomallei 406e] gi|254360283|ref|ZP_04976553.1| exodeoxyribonuclease III [Burkholderia mallei 2002721280] gi|52208247|emb|CAH34178.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei K96243] gi|52428396|gb|AAU48989.1| exodeoxyribonuclease III [Burkholderia mallei ATCC 23344] gi|76579000|gb|ABA48475.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1710b] gi|121228810|gb|ABM51328.1| exodeoxyribonuclease III [Burkholderia mallei SAVP1] gi|124294616|gb|ABN03885.1| exodeoxyribonuclease III [Burkholderia mallei NCTC 10229] gi|126218103|gb|ABN81609.1| exodeoxyribonuclease III [Burkholderia pseudomallei 668] gi|126225891|gb|ABN89431.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1106a] gi|126242150|gb|ABO05243.1| exodeoxyribonuclease III [Burkholderia mallei NCTC 10247] gi|134244530|gb|EBA44634.1| exodeoxyribonuclease III [Burkholderia pseudomallei 305] gi|147745198|gb|EDK52278.1| exodeoxyribonuclease III [Burkholderia mallei FMH] gi|147750538|gb|EDK57607.1| exodeoxyribonuclease III [Burkholderia mallei JHU] gi|148029523|gb|EDK87428.1| exodeoxyribonuclease III [Burkholderia mallei 2002721280] gi|157806098|gb|EDO83268.1| exodeoxyribonuclease III [Burkholderia pseudomallei 406e] gi|157935836|gb|EDO91506.1| exodeoxyribonuclease III [Burkholderia pseudomallei Pasteur 52237] gi|160698128|gb|EDP88098.1| exodeoxyribonuclease III [Burkholderia mallei ATCC 10399] gi|169653306|gb|EDS85999.1| exodeoxyribonuclease III [Burkholderia pseudomallei S13] gi|184212767|gb|EDU09810.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1655] gi|217391927|gb|EEC31953.1| exodeoxyribonuclease III [Burkholderia pseudomallei 576] gi|225933345|gb|EEH29337.1| exodeoxyribonuclease III [Burkholderia pseudomallei Pakistan 9] gi|237506823|gb|ACQ99141.1| exodeoxyribonuclease III [Burkholderia pseudomallei MSHR346] gi|238523636|gb|EEP87073.1| exodeoxyribonuclease III [Burkholderia mallei GB8 horse 4] gi|242141044|gb|EES27446.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1106b] gi|243062348|gb|EES44534.1| exodeoxyribonuclease III [Burkholderia mallei PRL-20] gi|254219572|gb|EET08956.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1710a] Length = 256 Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats. Identities = 62/264 (23%), Positives = 111/264 (42%), Gaps = 14/264 (5%) Query: 3 VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59 ++ V T N+N IR A W+ E N D +C+QE K + P E ++ + Sbjct: 1 MLRVITANLNGIRSAAKKGFFEWLGEQNADCVCVQEIKVSADDLPAEFVEPHGLRSYFHH 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G + S+ +P +++ + D + R++EA F L + ++Y+P G+ Sbjct: 61 AQKKGYSGAGLYSRREPDDVIIGYGSSEFDAEGRYVEARFG----KLSVVSVYVPSGSSG 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + L+ + +I GD NI+ + D N + ++ E Sbjct: 117 DERQQA--KYRFMDEFMPHLAELKAKREVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEE 174 Query: 180 RQSFQK-LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R K ++G+ D R Y++W +++KN G RID+ + +P + Sbjct: 175 RAWLTKLFDDVGYVDVFRTLDPRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGVAGTAKN 234 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 I K SDH P+ V D Sbjct: 235 TSIFRDI----KFSDHAPLTVDYD 254 >gi|257463916|ref|ZP_05628302.1| exodeoxyribonuclease III [Fusobacterium sp. D12] gi|317061443|ref|ZP_07925928.1| exodeoxyribonuclease III [Fusobacterium sp. D12] gi|313687119|gb|EFS23954.1| exodeoxyribonuclease III [Fusobacterium sp. D12] Length = 250 Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats. Identities = 70/261 (26%), Positives = 113/261 (43%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN IRA + + + + DI CLQETK + L+ + + + Sbjct: 1 MKLISWNVNGIRACLKKGFMEYFQAQDADIFCLQETKCSAGQVELD-LKGYHQYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +P+ + L ++ D + R I F + Sbjct: 60 KGYSGTAIFTKKEPLSVSYGLGIEEHDQEGRVICLEFEDFYMVTVYTPNSKNELERLDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + R +L ++P++ GD N+ + D NP +A FT E R Sbjct: 120 M------IWEDEFRNYLSKLNEKKPVVVCGDMNVAHEEIDLKNPKTNRRNAGFTDEERNK 173 Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L GFTD+ R + H YS+W Y A++ N G RID+ ++S + + A I Sbjct: 174 FTELLQAGFTDSFRYLYPDTLHAYSWWSYRANARKNNTGWRIDYFVVSNDWKEQIQEAEI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 + G SDH PV + L Sbjct: 234 HAEQEG----SDHCPVALYLK 250 >gi|229018928|ref|ZP_04175771.1| Exodeoxyribonuclease [Bacillus cereus AH1273] gi|229025172|ref|ZP_04181596.1| Exodeoxyribonuclease [Bacillus cereus AH1272] gi|228736105|gb|EEL86676.1| Exodeoxyribonuclease [Bacillus cereus AH1272] gi|228742371|gb|EEL92528.1| Exodeoxyribonuclease [Bacillus cereus AH1273] Length = 252 Score = 179 bits (454), Expect = 4e-43, Method: Composition-based stats. Identities = 69/262 (26%), Positives = 118/262 (45%), Gaps = 14/262 (5%) Query: 4 VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + +WNVN +RA +++E+N DI CLQE K + + + Sbjct: 1 MKLISWNVNGLRAVIAKGGFLEYLEESNADIFCLQEIKLQSGQIDLNP-EGYYTYWNYAV 59 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G AI +K +P+ + L D+ D + R I F + Sbjct: 60 KKGYSGTAIFTKKEPLSVTYGLGIDEHDQEGRVITLEFEDFHMI-----TLYTPNSKRGL 114 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + D ++ W F + + L+ ++P+IF GD N+ + D NP + F+ E R+ Sbjct: 115 ERLDYRMKWEDDFRAYIKR-LDKKKPVIFCGDLNVSHKEIDLKNPKSNRKNPGFSDEERE 173 Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 F K+ GF D R + YS+W Y + +KN G R+D+ + S + A+ Sbjct: 174 KFTKILEEGFVDTYRFLYPEQEGAYSWWSYRMGARAKNIGWRLDYFVTSERLKHKITDAK 233 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I+++ G SDH PV + +D Sbjct: 234 INSEIMG----SDHCPVELHMD 251 >gi|308183626|ref|YP_003927753.1| exodeoxyribonuclease III [Helicobacter pylori PeCan4] gi|308062786|gb|ADO04674.1| exodeoxyribonuclease III [Helicobacter pylori Cuz20] gi|308065811|gb|ADO07703.1| exodeoxyribonuclease III [Helicobacter pylori PeCan4] Length = 250 Score = 179 bits (453), Expect = 4e-43, Method: Composition-based stats. Identities = 70/260 (26%), Positives = 115/260 (44%), Gaps = 13/260 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + + DI C+QE+K + FE + + Sbjct: 1 MKLISWNVNGLRACMTKGFMDFFNSVDADIFCIQESKMQQDQNTFE-FKGYFDFWNCAIK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+GV +K +P+ + + ++ D + R + F + + N+Y+P+ S Sbjct: 60 KGYSGVVTFTKKEPLSVSYGINIEEHDKEGRVVTCEFE----SFYLVNVYVPNSQQALSR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 ++ R + LEL++P+I GD N+ D NP +A F+ E R Sbjct: 116 LSYRMSWEVE--FRKFLKALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L N GF D R + Y++W Y + KN G RID+ + S + L A I Sbjct: 174 FNELLNAGFIDTFRYFYPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALI 233 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 G SDH PV + L Sbjct: 234 YKDILG----SDHCPVGLEL 249 >gi|207091978|ref|ZP_03239765.1| exodeoxyribonuclease [Helicobacter pylori HPKX_438_AG0C1] Length = 250 Score = 179 bits (453), Expect = 4e-43, Method: Composition-based stats. Identities = 68/260 (26%), Positives = 115/260 (44%), Gaps = 13/260 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + + D+ C+QE+K + + FE + + Sbjct: 1 MKLISWNVNGLRACMTKGFMDFFNSVDADVFCIQESKMQQEQNTFE-FKGYFDFWNCAIK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+GV +K +P+ + + ++ D + R + F + + N+Y P+ S Sbjct: 60 KGYSGVVTFTKKEPLSVSYGINMEEHDKEGRVVTCEFE----SFYLVNVYTPNSQQALSR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 ++ + + LEL++P+I GD N+ D NP +A F+ E R Sbjct: 116 ISYRMSWEVE--FKKFLKALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L N GF D R + Y++W Y + KN G RID+ + S + L A I Sbjct: 174 FSELLNAGFIDTFRYFYPNKERAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALI 233 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 G SDH PV + L Sbjct: 234 YKDILG----SDHCPVGLEL 249 >gi|291545257|emb|CBL18366.1| exodeoxyribonuclease III [Ruminococcus sp. 18P13] Length = 256 Score = 179 bits (453), Expect = 4e-43, Method: Composition-based stats. Identities = 68/258 (26%), Positives = 111/258 (43%), Gaps = 13/258 (5%) Query: 4 VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA R A+ + + D C+QETK + E L N + + Sbjct: 1 MKLISWNVNGLRACREKGFEAFFAQEDADFFCIQETKLQAGQIQLE-LPGYNQYWHYADK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G A+ +K+ P+ + + + R + + + N Y+P+ Sbjct: 60 KGYSGTAVFTKHIPLSVQRDFGLPAHNGEGRVLTLEYP----DFYLVNAYVPNSKRELLR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 D + LR L+ +P+I+ GD N+ + D NP +A FT E R Sbjct: 116 L--DYRMEWEDALRQYLLGLDARKPVIYCGDLNVAHREIDLKNPKSNRRNAGFTDEERGR 173 Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 L + GFTD R + Y++W Y + KN G RID+ ++S L+ + I Sbjct: 174 LSTLLDSGFTDTFRLLYPDTAGAYTWWSYMFHAREKNAGWRIDYFIVSNRIAPLVQDSLI 233 Query: 242 DTKPRGWTKPSDHTPVIV 259 G SDH PV + Sbjct: 234 YKDVLG----SDHCPVGL 247 >gi|259417747|ref|ZP_05741666.1| exodeoxyribonuclease III [Silicibacter sp. TrichCH4B] gi|259346653|gb|EEW58467.1| exodeoxyribonuclease III [Silicibacter sp. TrichCH4B] Length = 262 Score = 179 bits (453), Expect = 4e-43, Method: Composition-based stats. Identities = 87/268 (32%), Positives = 124/268 (46%), Gaps = 11/268 (4%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIET 59 MS T+ATWN+NS+R R + ++E PD++CLQE K+ + P E + L Y H+ Sbjct: 1 MS-FTLATWNINSVRLREPIVIKLLQEEGPDVLCLQECKSPVEKIPMEAFRELGYQHMIA 59 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 GQK YNGVAILS+ ++ GD + I N Y+P G Sbjct: 60 RGQKGYNGVAILSRLPIEDV-----GDKDFASLGHARHVAGRLENGVTIHNFYVPAGGDE 114 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL 177 + + K +L + P GD NI P+ D ++ T Sbjct: 115 PDREKNVKFGQKLDYLTEMRDWFHADRPEKSVLVGDLNIAPREDDVWDHKKLLKVVSHTP 174 Query: 178 -EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSL 235 EV Q ++ G+ D R LYS+W Y A W +KG R+DH+ +P+ T+ Sbjct: 175 IEVEHLAQVMEAGGWADVTRKDIPEGQLYSWWSYRAKDWDAADKGRRLDHVWTTPDITNA 234 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 HS+RI RGW KPSDH PV + D+ Sbjct: 235 AHSSRILRGARGWEKPSDHAPVFATFDL 262 >gi|307566413|ref|ZP_07628850.1| exodeoxyribonuclease III [Prevotella amnii CRIS 21A-A] gi|307344885|gb|EFN90285.1| exodeoxyribonuclease III [Prevotella amnii CRIS 21A-A] Length = 249 Score = 179 bits (453), Expect = 4e-43, Method: Composition-based stats. Identities = 65/260 (25%), Positives = 103/260 (39%), Gaps = 12/260 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + N + D CLQETK ++ + + Sbjct: 1 MKFISWNVNGLRACVGKNFKEEFLALDADFFCLQETKMQEGQLDLS-FPGYESYWNYADK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K+ P+ + + ++ D + R I + Sbjct: 60 KGYSGTAIFTKHTPLSVSRGIGIEEHDHEGRVITLEMADFYLVTVYTPNSQDQLKRLPYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + L+ +P+I GD N+ + D NP +A F+ E R+ Sbjct: 120 MQWETDFQSY------LHSLDKHKPVIVCGDMNVAHEEIDLKNPKSNHFNAGFSDEEREK 173 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 L + GFTD R + YS+W Y + KN G RID+ ++S L A+I Sbjct: 174 MTTLLSNGFTDTFRFLYPEQVTYSWWSYRFKAREKNIGWRIDYFLISDRLRESLEEAKIH 233 Query: 243 TKPRGWTKPSDHTPVIVSLD 262 T+ G SDH PV + L Sbjct: 234 TEILG----SDHCPVEIILK 249 >gi|315585908|gb|ADU40289.1| exodeoxyribonuclease III [Helicobacter pylori 35A] Length = 250 Score = 179 bits (453), Expect = 4e-43, Method: Composition-based stats. Identities = 69/260 (26%), Positives = 114/260 (43%), Gaps = 13/260 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + + D+ C+QE+K + FE + + Sbjct: 1 MKLISWNVNGLRACMTKGFMDFFNSVDADVFCIQESKMQQDQNTFE-FKGYFDFWNCAIK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+GV +K +P+ + + ++ D + R + F + + N+Y P+ S Sbjct: 60 KGYSGVVTFTKKEPLSVSYGINMEEHDKEGRVVTCEFE----SFYLVNVYTPNSQQALSR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 ++ R + LEL++P+I GD N+ D NP +A F+ E R Sbjct: 116 LSYRMSWEVE--FRKFLKALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L N GF D R + Y++W Y + KN G RID+ + S + L A I Sbjct: 174 FNELLNAGFIDTFRYFYPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALI 233 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 G SDH PV + L Sbjct: 234 YKDILG----SDHCPVGLEL 249 >gi|21244621|ref|NP_644203.1| exodeoxyribonuclease III [Xanthomonas axonopodis pv. citri str. 306] gi|21110303|gb|AAM38739.1| exodeoxyribonuclease III [Xanthomonas axonopodis pv. citri str. 306] Length = 266 Score = 179 bits (453), Expect = 4e-43, Method: Composition-based stats. Identities = 66/273 (24%), Positives = 112/273 (41%), Gaps = 24/273 (8%) Query: 4 VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + ++N N +R A AW + D++C+QETK ++ Y Sbjct: 1 MRIISFNANGLRSAASKGFFAWFAAQDADVLCVQETKAQEHQLAGPDFLPTGYKAWFRDA 60 Query: 62 --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GVAI S+++P E+ T L + D + R+IEA F L + + Y+P G+ Sbjct: 61 STKKGYSGVAIYSRHEPDEVRTALGWPEFDEEGRYIEARFG----NLSVVSFYIPSGS-S 115 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + D K ++ + L + GD+NI+ D N + ++ Sbjct: 116 GELRQDYKFQVMQWLRPILDEWLASGRQYVLCGDWNIVRTALDIKNWKSNQKNSGCLPPE 175 Query: 180 RQSFQKLQN-----------MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 R L G+ D+ R H Y++W + + N G RID+ ++ Sbjct: 176 RDWLNGLCADAPEDASAADGRGWVDSYRVLHPQGQDYTWWSNRGAARANNVGWRIDYQLV 235 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +P L + I + R SDH P IV Sbjct: 236 TPGLRDALKACSIYREER----FSDHAPYIVDY 264 >gi|237753149|ref|ZP_04583629.1| exodeoxyribonuclease LexA [Helicobacter winghamensis ATCC BAA-430] gi|229375416|gb|EEO25507.1| exodeoxyribonuclease LexA [Helicobacter winghamensis ATCC BAA-430] Length = 250 Score = 179 bits (453), Expect = 4e-43, Method: Composition-based stats. Identities = 73/261 (27%), Positives = 120/261 (45%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + N D+ C+QE+K + + F+ + + + + Sbjct: 1 MRLISWNVNGLRACMNKGFMEFFNSVNADVFCIQESKMQREQAEFD-FPNYEEYWNSAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+GVAI SK +P+ + + D + R I A F+ + N+Y P+ Sbjct: 60 KGYSGVAIFSKIKPLSVEYDMGIAHHDKEGRIITAEFS----DFYLVNVYTPNSKRELER 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + R + LE ++P+I GD N+ + D NP +A FT E R+ Sbjct: 116 L--EYRMEWEDDFRTFLKNLESKKPVIVCGDLNVAHKEIDLKNPKTNRRNAGFTDEEREK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 L + GFTD R + Y++W Y + + N G RID+ + S S L SA I Sbjct: 174 MSALLDSGFTDTYRHFYPEKQGAYTWWSYMGKARANNTGWRIDYFLCSKILDSRLKSASI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 + G SDH PV + +D Sbjct: 234 YPEILG----SDHCPVGIEID 250 >gi|260887970|ref|ZP_05899233.1| exodeoxyribonuclease III [Selenomonas sputigena ATCC 35185] gi|330838548|ref|YP_004413128.1| exodeoxyribonuclease III [Selenomonas sputigena ATCC 35185] gi|260862221|gb|EEX76721.1| exodeoxyribonuclease III [Selenomonas sputigena ATCC 35185] gi|329746312|gb|AEB99668.1| exodeoxyribonuclease III [Selenomonas sputigena ATCC 35185] Length = 250 Score = 179 bits (453), Expect = 5e-43, Method: Composition-based stats. Identities = 65/260 (25%), Positives = 112/260 (43%), Gaps = 13/260 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + K + D+ +QETK + + E L + + + Sbjct: 1 MRFVSWNVNGLRACLGKGFMQSFKALDADVFGVQETKMQPEQAILE-LTGYKQYWNSAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G A+ S+ +P+ + L ++ D + R I F + + + G + Sbjct: 60 KGYSGTAVFSRIEPLSVSYGLGIEEHDHEGRVIALEFD-DLYFVTVYTPNSQRGLERLAY 118 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + R L+ ++P++ GD N+ D NP +A FT E R+ Sbjct: 119 R-----MTWEEAFRDYLLALDAKKPVVVCGDLNVAHTEIDLKNPKTNRKNAGFTDEEREK 173 Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +L GFTD RA + +Y++W Y + N G RID+ ++S + A I Sbjct: 174 MTELLAAGFTDTFRALYPDKTGIYTWWSYLRKARETNAGWRIDYFLVSDRLAPKIKEATI 233 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 + G SDH PV + L Sbjct: 234 HNEVFG----SDHCPVGLVL 249 >gi|115353211|ref|YP_775050.1| exodeoxyribonuclease III Xth [Burkholderia ambifaria AMMD] gi|172062083|ref|YP_001809735.1| exodeoxyribonuclease III Xth [Burkholderia ambifaria MC40-6] gi|115283199|gb|ABI88716.1| exodeoxyribonuclease III Xth [Burkholderia ambifaria AMMD] gi|171994600|gb|ACB65519.1| exodeoxyribonuclease III Xth [Burkholderia ambifaria MC40-6] Length = 257 Score = 179 bits (453), Expect = 5e-43, Method: Composition-based stats. Identities = 59/264 (22%), Positives = 111/264 (42%), Gaps = 14/264 (5%) Query: 3 VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59 ++ V T N+N IR A W+ E N D +C+QE K + P + ++ + Sbjct: 1 MMRVITANLNGIRSAAKKGFFEWLGEQNADCVCVQEIKVSADDLPADFVEPHGLRSYFHH 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G + S+++P +++ + D + R++EA + L + ++Y+P G+ Sbjct: 61 AEKKGYSGAGMYSRHEPDDVIIGFGSSEFDPEGRYVEARYG----KLSVVSVYVPSGSSG 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + L+ + +I GD NI+ + D N + ++ E Sbjct: 117 EERQQA--KYRFMDEFMPHLAELKSKREVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEE 174 Query: 180 RQSFQK-LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R + ++G+ D R Y++W +++KN G RID+ + +P Sbjct: 175 RAWLTQLFDDVGYVDVFRTLDPRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGVAGTAKR 234 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 I K SDH P+ V D Sbjct: 235 TSIFKDI----KFSDHAPLTVDYD 254 >gi|308064283|gb|ADO06170.1| exodeoxyribonuclease III [Helicobacter pylori Sat464] Length = 250 Score = 179 bits (453), Expect = 5e-43, Method: Composition-based stats. Identities = 70/260 (26%), Positives = 116/260 (44%), Gaps = 13/260 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + + DI C+QE+K + + FE + + Sbjct: 1 MKLVSWNVNGLRACMTKGFMDFFNSVDADIFCIQESKMQQEQNTFE-FKGYFDFWNCAIK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+GV +K +P+ + + ++ D + R + F + + N+Y+P+ S Sbjct: 60 KGYSGVVTFTKKEPLSVSYGINIEEHDKEGRVVTCEFEL----FYLVNVYVPNSQQALSR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 ++ R + LEL++P+I GD N+ D NP +A F+ E R Sbjct: 116 LSYRMSWEVE--FRKFLKALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L N GF D R + Y++W Y + KN G RID+ + S + L A I Sbjct: 174 FNELLNAGFIDTFRYFYPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSHPLKTRLKDALI 233 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 G SDH PV + L Sbjct: 234 YKDILG----SDHCPVGLEL 249 >gi|320354727|ref|YP_004196066.1| exodeoxyribonuclease III Xth [Desulfobulbus propionicus DSM 2032] gi|320123229|gb|ADW18775.1| exodeoxyribonuclease III Xth [Desulfobulbus propionicus DSM 2032] Length = 481 Score = 179 bits (453), Expect = 5e-43, Method: Composition-based stats. Identities = 61/258 (23%), Positives = 103/258 (39%), Gaps = 13/258 (5%) Query: 5 TVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC--G 61 + +WNVN +RA + + E + DI+ LQE K + Y Sbjct: 231 KLISWNVNGLRAVAKNGFLDVLHELDADILALQEIKAHPDQLDDQLRNVSGYQSFWHSAK 290 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y G A+ SK P+ ++ + D + R + + + N Y P+ P Sbjct: 291 KKGYAGTAVFSKIPPLRVLYGMEQPQFDDEGRVLTLEYP----DFYLINTYSPNAQPELK 346 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 R L RL E+ ++ GD N+ + D NP + F+ + R Sbjct: 347 RL--AFKQEFNRTLLAYMDRLRSEKTVVLCGDLNVAHKEIDLANPKANVKNPGFSEQERA 404 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +L G+ D R + Y++W Y ++ +KN G RID+ ++ + + A I Sbjct: 405 WMDELIAAGYVDTFRQFNQEAGQYTWWSYRFNARAKNIGWRIDYFIVDGSSRDRVLEAAI 464 Query: 242 DTKPRGWTKPSDHTPVIV 259 + G SDH PV + Sbjct: 465 HGEITG----SDHCPVSL 478 >gi|289771097|ref|ZP_06530475.1| exodeoxyribonuclease III [Streptomyces lividans TK24] gi|289701296|gb|EFD68725.1| exodeoxyribonuclease III [Streptomyces lividans TK24] Length = 274 Score = 179 bits (453), Expect = 5e-43, Method: Composition-based stats. Identities = 53/267 (19%), Positives = 100/267 (37%), Gaps = 8/267 (2%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++TV + NVN +RA W+ + D++CLQE + E P +H+ Sbjct: 8 MLTVTSVNVNGLRAAAKKGFVEWLAGTSADVLCLQEVRAEPHQLPDHAGAPEGWHVTHAP 67 Query: 62 Q--KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 K GV++ ++ +P + + D R++EA T + G Sbjct: 68 AAAKGRAGVSLYTRREPDAVRVGFGSTEFDTSGRYVEADLPGVTVA-SLYLPSGEVGTER 126 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K ++ + ++ GD+NI + D N + ++ F E Sbjct: 127 QDEKVRFMGEFLAYLKELRERAAAEGREVVVCGDWNIAHREADLKNWRANKKNSGFLPEE 186 Query: 180 RQSFQKLQNMGFTDAIRA----THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 R+ ++ + + D YS+W Y ++ + G RID+ + +P + Sbjct: 187 REWLGRVLDPAEGGYVDVVRALHPDVEGPYSWWSYRGRAFDNDAGWRIDYHVSTPGLAAK 246 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262 ++ + SDH PV V D Sbjct: 247 AVKGYVERAATHAERWSDHAPVTVVYD 273 >gi|152992239|ref|YP_001357960.1| exodeoxyribonuclease III [Sulfurovum sp. NBC37-1] gi|151424100|dbj|BAF71603.1| exodeoxyribonuclease III [Sulfurovum sp. NBC37-1] Length = 256 Score = 179 bits (453), Expect = 5e-43, Method: Composition-based stats. Identities = 67/265 (25%), Positives = 104/265 (39%), Gaps = 11/265 (4%) Query: 1 MSVVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 M+ T +WNVN IRA N WI E++ D + LQE K E P + +Y ++ Sbjct: 1 MAKTTFISWNVNGIRAVEKKNALKWIDESDIDFLGLQEIKAEADQIPDSIFEK-HYKFQS 59 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 S G + ++ + D E + Sbjct: 60 INSSSRKGQSGVA----LFTNIKGTASGGDHIDILNEGRINEYHFGSYVLFNVYFPNGQR 115 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + + K+++ +RFL + ++ + +I GD N + D P EN + F Sbjct: 116 SEERLAYKLAFYERFLAYINEVRTEGKSIIICGDVNTAHKEIDLARPKSNENTSGFLPVE 175 Query: 180 RQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R KL + G+ D R H D YS+W Y + +N G RID+ +S + + Sbjct: 176 RAWMDKLLDNGYIDTFRYIHGDEPDRYSWWSYRTKARERNVGWRIDYFFVSDDLKEKIVD 235 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263 A I G SDH PV + LDI Sbjct: 236 ADILDHIMG----SDHCPVKLVLDI 256 >gi|260432325|ref|ZP_05786296.1| exodeoxyribonuclease III [Silicibacter lacuscaerulensis ITI-1157] gi|260416153|gb|EEX09412.1| exodeoxyribonuclease III [Silicibacter lacuscaerulensis ITI-1157] Length = 262 Score = 179 bits (453), Expect = 5e-43, Method: Composition-based stats. Identities = 80/264 (30%), Positives = 119/264 (45%), Gaps = 10/264 (3%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQK 63 T+ATWN+NS+R R + ++E +PD++CLQE K+ P E L Y H+ GQK Sbjct: 4 TLATWNINSVRLREPIVLKLLQEESPDVLCLQECKSPVDKIPTEGFAELGYTHMIARGQK 63 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 YNGVAILS+ ++ + + + + P G + + Sbjct: 64 GYNGVAILSRLPITDLGDRDFAGLGHARHVAGQLENGVIIHNFYV-----PAGGDVPDRE 118 Query: 124 YDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180 ++K +L E+P GD NI P+ D ++ T EV Sbjct: 119 VNEKFGQKLDYLTDMRDWFHAEKPQKSILVGDLNIAPREDDVWSHKQLLKVVSHTPIEVA 178 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHSA 239 + G+ D R LYS+W Y A W NKG R+DH+ +P+ ++ HS+ Sbjct: 179 HLAETQDAGGWVDITRQDIPEGQLYSWWSYRARDWDAANKGRRLDHVWATPDISNAGHSS 238 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 RI RGW KPSDH PV + D+ Sbjct: 239 RILRDARGWEKPSDHAPVFATFDL 262 >gi|295107237|emb|CBL04780.1| exodeoxyribonuclease III [Gordonibacter pamelaeae 7-10-1-b] Length = 285 Score = 179 bits (453), Expect = 5e-43, Method: Composition-based stats. Identities = 71/290 (24%), Positives = 108/290 (37%), Gaps = 35/290 (12%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + E + DI+ LQETK ++ + Q Y Sbjct: 1 MRFISWNVNGLRAVQKKGFEDIVCELDADIVALQETKLQEGQATLDLPQYREYWSYAEK- 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT-INTQTLRIGNLYLPHGNPITS 121 K Y+G A+ +K QP++++ L D LD + R + F + N Sbjct: 60 KGYSGTAVFTKEQPLQVLHGLGSDYLDAEGRIVALEFPQFWFVDVYTPNAQNELARIAHR 119 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLI---------------------------FAGDY 154 ++DD + L ++ GD+ Sbjct: 120 MEWDDAFRDFCKGLEEGVLPADVPVQRPAPGEGHVCISELPLTQPGETAAPKPVVMCGDF 179 Query: 155 NIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYAD 213 N+ Q D NP A F+ E R F L GF D R H YS+W Y Sbjct: 180 NVAHQEIDLKNPGPNRGKAGFSDEERGKFTDLLEAGFVDTFRRLHPDVTGAYSWWSYRFK 239 Query: 214 SWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + N G RID+ ++S + SA I + G SDH PV + L++ Sbjct: 240 ARQNNAGWRIDYFLVSESLAPKVASACIYDEVYG----SDHCPVGLELEL 285 >gi|239981665|ref|ZP_04704189.1| exodeoxyribonuclease [Streptomyces albus J1074] gi|291453527|ref|ZP_06592917.1| exodeoxyribonuclease [Streptomyces albus J1074] gi|291356476|gb|EFE83378.1| exodeoxyribonuclease [Streptomyces albus J1074] Length = 264 Score = 179 bits (453), Expect = 5e-43, Method: Composition-based stats. Identities = 56/264 (21%), Positives = 99/264 (37%), Gaps = 6/264 (2%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++TV T NVN +RA W+ + D++CLQE + E+ P +H+ Sbjct: 1 MLTVTTANVNGLRAAAKKGYVEWLAATDADVVCLQEVRAEESQLPEAVRAPEGWHVVFAP 60 Query: 62 Q--KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 K GVA+L++ P + T + D R++EA T + G Sbjct: 61 AAAKGRAGVALLTRRAPERVRTGFGSAEFDTSGRYVEADLPGVTVA-SLYLPSGEVGTER 119 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K +++ ++ ++ GD+NI Q D N + F E Sbjct: 120 QDEKERFMAEFLEYLKELRARAAADGREVVVCGDWNIAHQEADLKNWKANRKSSGFLPEE 179 Query: 180 RQSFQKLQNMGFTDAIRA--THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 R ++ + + YS+W Y ++ + G RID + +P + Sbjct: 180 RAWLDRVYAEAGYADVMRALHPEQAGPYSWWSYRGRAFDNDSGWRIDLHVATPGLAARAV 239 Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261 +++ + SDH PV V Sbjct: 240 KGQVERAATHEERWSDHAPVTVVY 263 >gi|58040696|ref|YP_192660.1| exodeoxyribonuclease III [Gluconobacter oxydans 621H] gi|58003110|gb|AAW62004.1| Exodeoxyribonuclease III [Gluconobacter oxydans 621H] Length = 282 Score = 179 bits (453), Expect = 5e-43, Method: Composition-based stats. Identities = 80/264 (30%), Positives = 125/264 (47%), Gaps = 6/264 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62 + + TWN+NS+R R+ L +++ NPDI+CLQETK D FP + L + H G Sbjct: 18 MRLITWNINSLRLRLPLLKQIVEQENPDIVCLQETKVPDPLFPAQALAEMGLPHQIYKGM 77 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K YNGVAILS+++ + P R + A+ + + + Y+P G I Sbjct: 78 KGYNGVAILSRHELQSVD-GTPDWCTRSDCRHVAASIATPAGPILLHDFYVPAGGDIPDP 136 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + ++K + F+ A+ P GD NI P HD ++ T Sbjct: 137 EENEKFAHKLAFVDEATSWFTSTPPARSILVGDLNIAPLEHDVWSHKQLLKIVSHTPPEI 196 Query: 181 QSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLLHS 238 + + GF DA+R LY++W Y W K N+G R+DH+ ++P+ L + Sbjct: 197 ERLKAWMATGFQDAMRTITPEPEKLYTWWSYRNRDWKKSNRGRRLDHVWMTPDLMPGLRN 256 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 R+ + R W PSDH PV++ D Sbjct: 257 VRVLQEVRDWGSPSDHVPVVLDFD 280 >gi|313114917|ref|ZP_07800415.1| exodeoxyribonuclease III [Faecalibacterium cf. prausnitzii KLE1255] gi|310622794|gb|EFQ06251.1| exodeoxyribonuclease III [Faecalibacterium cf. prausnitzii KLE1255] Length = 250 Score = 179 bits (453), Expect = 5e-43, Method: Composition-based stats. Identities = 66/263 (25%), Positives = 109/263 (41%), Gaps = 16/263 (6%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60 + + +WNVN +RA + H A + DI +QETK + Y + + Sbjct: 1 MKLISWNVNGLRACLTHGFAESFAALDADIFSVQETKMQPGQ---ADFAPDGYTEYTYSA 57 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+G A + QP+ + T + + D + R + + + N Sbjct: 58 EKKGYSGTACWCREQPLSVTTGIGIEQHDHEGRVLTLEYPG------FWLVNCYTPNSQD 111 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 K D + R L+ ++P+I GD N+ + D N A FT + R Sbjct: 112 GLKRLDYRMEWEDAFRAYLLALDAKKPVILCGDLNVAHREIDIKNDKTNHMSAGFTDQER 171 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 +L + GF D+ R H YS+W Y + KN G RID+ ++S + +A Sbjct: 172 GKMTELLDAGFADSFRVLHPDEVKYSWWSYRFHAREKNAGWRIDYFIVSRRIADKIRAAE 231 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263 I + G SDH PV + +D+ Sbjct: 232 IHNEIFG----SDHCPVELDIDL 250 >gi|258648040|ref|ZP_05735509.1| exodeoxyribonuclease III [Prevotella tannerae ATCC 51259] gi|260851895|gb|EEX71764.1| exodeoxyribonuclease III [Prevotella tannerae ATCC 51259] Length = 250 Score = 179 bits (453), Expect = 5e-43, Method: Composition-based stats. Identities = 67/261 (25%), Positives = 102/261 (39%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + + D CLQETK ++ + + Sbjct: 1 MKFISWNVNGLRAVDGKGFRDIFRAIDADFFCLQETKMQEGQLDI-AFDGYESYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K++P+ + L D+ D + R I + Sbjct: 60 KGYSGTAIFTKHKPLSVQIGLGIDEHDHEGRVITLELDDFYLVCVYTPNSQDELRRLDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + +L+ +P+I GD N+ Q D NP +A FT E R+ Sbjct: 120 M------IWEEAFQAHLHKLDAHKPVIVCGDMNVAHQEIDLKNPKTNRRNAGFTDEEREK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +L + GF D R H YS+W Y + KN G RID+ ++S L A I Sbjct: 174 MTQLLSNGFIDTFRYFHPDLTGAYSWWSYRFRAREKNTGWRIDYFLVSERLKPRLVEANI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 G SDH PV + L Sbjct: 234 HNDIMG----SDHCPVELILK 250 >gi|32475225|ref|NP_868219.1| exodeoxyribonuclease [Rhodopirellula baltica SH 1] gi|32445766|emb|CAD78497.1| exodeoxyribonuclease [Rhodopirellula baltica SH 1] Length = 256 Score = 179 bits (453), Expect = 5e-43, Method: Composition-based stats. Identities = 71/262 (27%), Positives = 123/262 (46%), Gaps = 13/262 (4%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IET 59 + + +WNVN IRA + +++ PD++CLQETK E + L YH T Sbjct: 4 TLKLISWNVNGIRASMDKGFREFVESEQPDVLCLQETKAEPEQVDLSWADELGYHQVWNT 63 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 ++ Y+GV+ S+ +P+++ L ++ D + R + TF + Sbjct: 64 ATKRGYSGVSTWSRVEPLKVTKGLSIEEHDNEGRVLTTTFDDFHL-----VNVYTPNSQR 118 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + D ++ W + FL + + L +P++F GD N + D NP +A F+ + Sbjct: 119 GLARLDYRMQWDEAFLDYVKK-LNRRKPVLFCGDVNCAHKEIDLANPKANRKNAGFSDQE 177 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R + GF D+ R HD YS+W Y +D+ ++N G R+D+ ++ + A Sbjct: 178 RAGLDAVTEAGFIDSFRQFHDGPGHYSWWTYRSDARARNIGWRLDYFWVAKNFWDRVADA 237 Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261 RI + G SDH PV ++L Sbjct: 238 RIRCEIHG----SDHCPVELTL 255 >gi|260584873|ref|ZP_05852618.1| exodeoxyribonuclease III [Granulicatella elegans ATCC 700633] gi|260157530|gb|EEW92601.1| exodeoxyribonuclease III [Granulicatella elegans ATCC 700633] Length = 253 Score = 178 bits (452), Expect = 5e-43, Method: Composition-based stats. Identities = 70/262 (26%), Positives = 119/262 (45%), Gaps = 14/262 (5%) Query: 4 VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPF-ETLQSLNYHIETC 60 + + TWNVN IR+ ++ L ++ E PDI+CLQETK + + + + + Sbjct: 1 MKLTTWNVNGIRSVLNKGALQEYVLEAQPDILCLQETKAQPEQVDLGMEFAGYHAYWNSA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+G AI +K +PI + L ++ D + R I A + ++ Sbjct: 61 VKKGYSGTAIFTKEEPISVQYGLGIEEHDQEGRVITAEYADYYLVTVYTPNAKRDLTRLS 120 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + + ++LE +P+IF GD N+ + D NP +A FT E R Sbjct: 121 YRQ------VWEDDFLAFIKKLEETKPVIFCGDLNVAHKEIDLANPKTNTKNAGFTKEER 174 Query: 181 QSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + F ++ G DA R + Y++W Y + ++N G RID+ ++S TS + Sbjct: 175 EKFDQIVENGLVDAFRFRYPEAVGAYTWWSYMGGARARNIGWRIDYFVVSEVLTSRIQEV 234 Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261 +I G SDH PV + + Sbjct: 235 KIRADVTG----SDHCPVEMEI 252 >gi|312898827|ref|ZP_07758215.1| exodeoxyribonuclease III [Megasphaera micronuciformis F0359] gi|310619989|gb|EFQ03561.1| exodeoxyribonuclease III [Megasphaera micronuciformis F0359] Length = 250 Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats. Identities = 72/261 (27%), Positives = 113/261 (43%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + KE + DI CLQETK + + L + + Sbjct: 1 MKFISWNVNGLRAVMKKGFPEIFKELDADIFCLQETKLQAGQIEMD-LPGYEQYWNYADK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI ++ +P+ + + D+ D + R I F + Sbjct: 60 KGYSGTAIFTRIKPLSVSYGMNIDEHDHEGRLITLEFEDFYFI-----TCYTPNSQSELA 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + D ++ W F + ++ L +P+IF GD N+ + D NP +A F+ E R Sbjct: 115 RLDYRMRWEDDFRNYVTE-LNRTKPVIFCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +L GFTD R + +YS+W Y + N G RID+ + S S L A I Sbjct: 174 MTELLAAGFTDTWRYFYPDKEGVYSWWSYRFKARQNNSGWRIDYFITSSALDSRLKEALI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 T G SDH PV + ++ Sbjct: 234 YTNIEG----SDHCPVGLVIE 250 >gi|75674284|ref|YP_316705.1| exodeoxyribonuclease III xth [Nitrobacter winogradskyi Nb-255] gi|74419154|gb|ABA03353.1| exodeoxyribonuclease III xth [Nitrobacter winogradskyi Nb-255] Length = 295 Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats. Identities = 73/269 (27%), Positives = 119/269 (44%), Gaps = 9/269 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62 +T+ TWN+NS+R RI +A ++K PD++CLQETK D FP + L Y HI GQ Sbjct: 27 LTLTTWNINSVRLRIDLVARFLKAQRPDVLCLQETKCPDDAFPLKRFHRLGYEHIALNGQ 86 Query: 63 KSYNGVAILSKYQPI--EIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 K Y+GVA++SK I T D + + + + G+ Sbjct: 87 KGYHGVAVVSKLPFDASNIRTFCDKIDSRHVSVILGGEAGLAAPLVLHNFYVPAGGDIPD 146 Query: 121 ---STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + K+ K+ ++ A + + + GD N+ P +D ++ T Sbjct: 147 PALNPKFAHKLQFLDEMKGCAPLHPDNGDRHVLVGDLNVAPHENDVWSHKQLLKIVSHTP 206 Query: 178 EVRQSFQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATS 234 + +Q+ A + +Y++W Y A W + N+G R+DHI +S Sbjct: 207 IECEKLLGVQDRGNWVDIARARIPMSEKVYTWWSYRAADWVAANRGRRLDHIWVSEALRD 266 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + RI RGW +PSDH PV +++ Sbjct: 267 GIRDFRITRDARGWERPSDHVPVTAVIEV 295 >gi|21221611|ref|NP_627390.1| exodeoxyribonuclease [Streptomyces coelicolor A3(2)] gi|6138859|emb|CAB59670.1| putative exodeoxyribonuclease (EC 3.1.11.2) (putative secreted protein) [Streptomyces coelicolor A3(2)] Length = 274 Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats. Identities = 53/267 (19%), Positives = 100/267 (37%), Gaps = 8/267 (2%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++TV + NVN +RA W+ + D++CLQE + E P +H+ Sbjct: 8 MLTVTSVNVNGLRAAAKKGFVEWLAGTSADVLCLQEVRAEPHQLPDHAGAPEGWHVTHAP 67 Query: 62 Q--KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 K GV++ ++ +P + + D R++EA T + G Sbjct: 68 AAAKGRAGVSLYTRREPDAVRVGFGSTEFDTSGRYVEADLPGVTVA-SLYLPSGEVGTER 126 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K ++ + ++ GD+NI + D N + ++ F E Sbjct: 127 QDEKVRFMGEFLAYLKELRERAAAQGREVVVCGDWNIAHREADLKNWRANKKNSGFLPEE 186 Query: 180 RQSFQKLQNMGFTDAIRA----THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 R+ ++ + + D YS+W Y ++ + G RID+ + +P + Sbjct: 187 REWLGRVLDPAEGGYVDVVRALHPDVEGPYSWWSYRGRAFGNDAGWRIDYHVSTPGLAAK 246 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262 ++ + SDH PV V D Sbjct: 247 AVKGYVERAATHAERWSDHAPVTVVYD 273 >gi|170743018|ref|YP_001771673.1| exodeoxyribonuclease III Xth [Methylobacterium sp. 4-46] gi|168197292|gb|ACA19239.1| exodeoxyribonuclease III Xth [Methylobacterium sp. 4-46] Length = 269 Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats. Identities = 78/267 (29%), Positives = 123/267 (46%), Gaps = 7/267 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62 +TV+TWN+NS+R RI + ++ E PD++CLQETK + FP + LQ Y H+ GQ Sbjct: 3 LTVSTWNINSVRLRIDLVRRFLDEARPDVLCLQETKCPNDRFPLKELQGFGYPHVVFAGQ 62 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLD-VQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 K YNGVAILS+ + D D + + + + Y+P G + Sbjct: 63 KGYNGVAILSRLPLLSQEVMSFCDRPDARHISAVLGPEAGEAAGIVLHDFYVPAGGDVPD 122 Query: 122 TKYDDKISWIKRFLRFASQR--LELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-E 178 +DK + F+ P I GD N+ P HD ++ + T E Sbjct: 123 AALNDKFAHKLAFMDELRAWGGKRPTGPAILVGDLNVAPLEHDVWSHRQLLDVVSHTPVE 182 Query: 179 VRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLL 236 + G+ D +R +Y++W Y + W + +KG R+DHI ++ + + Sbjct: 183 TERLETLRGEAGWVDTMRHLRPEPEKIYTWWSYRSPDWAAADKGRRLDHIWVTADLAGSV 242 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263 + + R W +PSDH PV V LD+ Sbjct: 243 KAVTVARHARAWERPSDHVPVTVELDL 269 >gi|85714109|ref|ZP_01045098.1| exodeoxyribonuclease III xth [Nitrobacter sp. Nb-311A] gi|85699235|gb|EAQ37103.1| exodeoxyribonuclease III xth [Nitrobacter sp. Nb-311A] Length = 271 Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats. Identities = 75/269 (27%), Positives = 117/269 (43%), Gaps = 9/269 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62 +T TWN+NS+R RI +A ++K PD++CLQETK D FP + + L Y H+ GQ Sbjct: 3 LTFTTWNINSVRLRIDLVAKFLKAQRPDVLCLQETKCPDDAFPLKRFRQLGYDHVALNGQ 62 Query: 63 KSYNGVAILSKYQPIEIV-THLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT- 120 K Y+GVA++SK I L + N Y+P G I Sbjct: 63 KGYHGVAVVSKLPFDASNIRTFCDKIDSRHVSVIFGGQAGLAAPLVLHNFYVPAGGDIPD 122 Query: 121 ---STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + K+ K+ ++ A + + GD N+ P +D ++ T Sbjct: 123 PAMNPKFAHKLQFLDEMKACAPLHPGNGDRHVLVGDLNVAPHENDVWSHRQLLKIVSHTP 182 Query: 178 EVRQS--FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATS 234 + + A + +Y++W Y A W + ++G R+DHI +S S Sbjct: 183 IECEKLLGVQKHGNWVDIARARIPMSEKIYTWWSYRAADWIASDRGRRLDHIWVSEALRS 242 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + RI RGW +PSDH PV +D+ Sbjct: 243 GIRDFRITRDARGWQRPSDHVPVTAVIDV 271 >gi|170051904|ref|XP_001861978.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167872934|gb|EDS36317.1| conserved hypothetical protein [Culex quinquefasciatus] Length = 340 Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats. Identities = 69/263 (26%), Positives = 112/263 (42%), Gaps = 13/263 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 V +++WNV +R+ + +++ PDI+CLQETK + P E YH + Sbjct: 88 VKISSWNVAGLRSWVEKGCLEFLEHEAPDILCLQETKCTEDQLPEEARHIKGYHPYWLCK 147 Query: 63 KSYN-GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 GVAI SK P + L + D R + A + + +Y+P+ Sbjct: 148 PGGYAGVAIYSKKMPFNVSYGLGDAEQDEDGRLLTAEYE----KFYLVCVYVPNAGRKLV 203 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 T K + L+ ++P+I GD N+ D NP + +A FT E R Sbjct: 204 TL--PKRMRWDEKFLQYLRDLDAKKPVILCGDMNVAHAEIDLANPKTNKKNAGFTQEERD 261 Query: 182 SFQKLQNMGFTDAIRATHDTHHL-YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 L + GF D R + Y+FW Y ++ +KN G R+D+ + S + + Sbjct: 262 GMTNLLSHGFVDTFRQRYPEQKAAYTFWTYMGNARAKNVGWRLDYFIASERLAGRVVDSV 321 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263 I G SDH P+ + L++ Sbjct: 322 IRPGVYG----SDHCPITLLLNL 340 >gi|144897972|emb|CAM74836.1| Endonuclease/exonuclease/phosphatase [Magnetospirillum gryphiswaldense MSR-1] Length = 262 Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats. Identities = 78/264 (29%), Positives = 121/264 (45%), Gaps = 6/264 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62 + V TWN+NSIR R L ++ PD+ICLQE K D+ FP + +SL + HI G Sbjct: 1 MRVVTWNINSIRLRFDLLRQVVERLTPDVICLQEIKVVDELFPADECRSLGFPHIAFHGM 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K YNGVAILSK E +T D + + +P + Sbjct: 61 KGYNGVAILSKRPIRETMTPSWCGRDDRRHLVAKLDEAEIHCLYV--PAGGDIPDPQQND 118 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K+ K+ ++++ + + + + +I GD N+ P D ++ T Sbjct: 119 KFAHKLDFLRQVTDWYAGTYKPGDRVILTGDLNVAPLETDVWSHKQLLKVVSHTPIEVDL 178 Query: 183 FQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSWSKN-KGIRIDHIMLSPEATSLLHSA 239 ++Q R + LY++W Y + W KN +G R+DH+ ++P L S Sbjct: 179 LDRMQASLGWVDAMRRFIPPSERLYTWWSYRSPDWEKNDRGRRLDHVWVTPALGDTLRSV 238 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 + + R WT+PSDH PV+V LDI Sbjct: 239 EVLRECRSWTQPSDHVPVLVELDI 262 >gi|295101467|emb|CBK99012.1| exodeoxyribonuclease III [Faecalibacterium prausnitzii L2-6] Length = 250 Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats. Identities = 68/263 (25%), Positives = 117/263 (44%), Gaps = 16/263 (6%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60 + + +WNVN +RA + H+ AA + D+ +QETK + Y + + Sbjct: 1 MKLISWNVNGLRACLTHDFAASFAALDADVFSVQETKMQPGQ---ADFAPEGYTEYTYSA 57 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+G A K P+ + T + ++ D + R + + + Sbjct: 58 EKKGYSGTACWCKTVPLSVTTGIGIEEHDHEGRVLTLEYPE-----SYLVNCYTPNSQDG 112 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + D +++W F + + L+ ++P+I GD N+ Q D N A FT + R Sbjct: 113 LKRLDYRMTWEDAFRAYLLE-LDAKKPVILCGDLNVAHQEIDIKNAKTNRMSAGFTDQER 171 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 +L +GFTD+ RA H YS+W Y + KN G RID+ ++S + +A Sbjct: 172 AKMTELLAVGFTDSFRAIHPDEVKYSWWSYRFHAREKNAGWRIDYFIVSNRIADKIKAAE 231 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263 I + G SDH PV + +D+ Sbjct: 232 IHNEVFG----SDHCPVELDIDL 250 >gi|188528295|ref|YP_001910982.1| exodeoxyribonuclease III [Helicobacter pylori Shi470] gi|188144535|gb|ACD48952.1| exodeoxyribonuclease [Helicobacter pylori Shi470] Length = 250 Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats. Identities = 69/260 (26%), Positives = 115/260 (44%), Gaps = 13/260 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + + D+ C+QE+K + FE + + Sbjct: 1 MKLVSWNVNGLRACMTKGFMDFFNSVDADVFCIQESKMQQDQNTFE-FKGYFDFWNCAIK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+GV +K +P+ + + ++ D + R + F + + N+Y+P+ S Sbjct: 60 KGYSGVVTFTKKEPLSVSYGINIEEHDKEGRVVTCEFEL----FYLVNVYVPNSQQALSR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 ++ R + LEL++P+I GD N+ D NP +A F+ E R Sbjct: 116 LSYRMSWEVE--FRKFLKALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L N GF D R + Y++W Y + KN G RID+ + S + L A I Sbjct: 174 FNELLNAGFIDTFRYFYPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSHPLKTRLKDALI 233 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 G SDH PV + L Sbjct: 234 YKDILG----SDHCPVGLEL 249 >gi|326202355|ref|ZP_08192224.1| exodeoxyribonuclease III [Clostridium papyrosolvens DSM 2782] gi|325987473|gb|EGD48300.1| exodeoxyribonuclease III [Clostridium papyrosolvens DSM 2782] Length = 253 Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats. Identities = 70/262 (26%), Positives = 118/262 (45%), Gaps = 13/262 (4%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + +WNVN +R+ I + KE + DI C+QETK ++ E ++ ++ Sbjct: 1 MTKLVSWNVNGLRSCIGKGFWDFFKEVDADIFCVQETKLQEGQLELE-IEGYEHYWNYAV 59 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G AI +K +P+ + ++ D + R I F + + N Sbjct: 60 KKGYSGTAIFTKIKPVSSSCGIGIEEHDNEGRVITLEFE------EFFLVNVYTPNSKRE 113 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + + + R ++LE +P+I GD N+ Q D NP + A FT+E R+ Sbjct: 114 LERLEYRMKWEDDFREYLKQLEQTKPVIICGDMNVAHQEIDLKNPRSNKRSAGFTMEERE 173 Query: 182 SFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 F +L GF D R + Y++W Y S KN G RID+ +S + +A Sbjct: 174 KFSQLLEHGFVDTFRMLYPDKTGAYTWWSYMFKSREKNAGWRIDYFCVSGALKDRIEAAE 233 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I + G SDH PV +++ Sbjct: 234 IYSDTMG----SDHCPVGLTIK 251 >gi|188588613|ref|YP_001921245.1| exodeoxyribonuclease III [Clostridium botulinum E3 str. Alaska E43] gi|188498894|gb|ACD52030.1| exodeoxyribonuclease III [Clostridium botulinum E3 str. Alaska E43] Length = 251 Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats. Identities = 71/257 (27%), Positives = 118/257 (45%), Gaps = 13/257 (5%) Query: 5 TVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +WNVN +RA + +KE+N DI C+QE+K ++ + +Y +K Sbjct: 3 KLISWNVNGLRACVKKGFLDILKESNADIFCIQESKLQEGQIDLNLEEYYDY-WNYAEKK 61 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 Y+G A+ SK +P+ I + ++ D + R + F + N+Y P+ + Sbjct: 62 GYSGTAVFSKEKPLNISLGIGIEEHDKEGRVLTLEFE----EFYLVNVYTPNSQQKLARI 117 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 D + R L ++ +I GD N+ + D NP N+A F+ E R+ F Sbjct: 118 --DYRMAWENDFRDYLNELNKDKSVIVCGDLNVAHKEIDLKNPKNNRNNAGFSDEEREKF 175 Query: 184 QKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 +L GF D R + YS+W Y ++ + N G RID+ ++S + L A I Sbjct: 176 DELLKSGFIDTYRYFYPDKEGAYSWWSYRFNARANNAGWRIDYFLVSKDFEDRLVDANIH 235 Query: 243 TKPRGWTKPSDHTPVIV 259 T+ G SDH PV + Sbjct: 236 TQIEG----SDHCPVEL 248 >gi|163844025|ref|YP_001628429.1| exodeoxyribonuclease III (xth) [Brucella suis ATCC 23445] gi|163674748|gb|ABY38859.1| exodeoxyribonuclease III (xth) [Brucella suis ATCC 23445] Length = 268 Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats. Identities = 76/266 (28%), Positives = 123/266 (46%), Gaps = 9/266 (3%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64 +ATWN+NS+R R+ + ++++ PD++CLQETK D FP + ++L Y HI GQK Sbjct: 5 IATWNINSVRLRMPLVEQFLRDYQPDVLCLQETKCPDDLFPAKGFRALGYEHIAISGQKG 64 Query: 65 YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124 Y+GVA +S+ + R + A + LRI N Y+P G + Sbjct: 65 YHGVATVSRRPLDGVEK--VDFCNMGDCRHLSAVVEAGDRKLRIHNFYVPAGGDEPDPEI 122 Query: 125 DDKISWIKRF---LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180 + K + F +R + + GD NI P +D ++ T E Sbjct: 123 NPKFAHKLAFLEEMRAIIADRKDGCSSLLVGDLNIAPLENDVWSHKQLLKIVSHTPIETE 182 Query: 181 QSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHS 238 G++D +R +Y++W Y A W ++G R+DH+ S + S + Sbjct: 183 TLENLRIKGGWSDLMRHLIAADQKIYTWWSYRAKDWDAADRGRRLDHVWGSADLESHIKG 242 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIP 264 ++ RGW +PSDH PVI + D+ Sbjct: 243 LQVLRDARGWDRPSDHVPVIATFDLD 268 >gi|299143331|ref|ZP_07036411.1| exodeoxyribonuclease III [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298517816|gb|EFI41555.1| exodeoxyribonuclease III [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 250 Score = 178 bits (452), Expect = 6e-43, Method: Composition-based stats. Identities = 71/261 (27%), Positives = 113/261 (43%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA I E N D+ LQE K + FE L+ + + Sbjct: 1 MKLVSWNVNGLRAVIKKGFVDSFNEINADVFALQEIKLSEGQLDFE-LEGYKMYYNYAQR 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI ++ +PI + + ++ D + R I A F + Sbjct: 60 KGYSGTAIFTRIEPISVSYGIGMEEHDTEGRVITAEFEKFYF-----VTCYTPNSKRGLE 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + ++ W R +L +P++ GD N+ + D NP +A FT E R Sbjct: 115 RLEYRMVWE-DVFRNYLNKLRETKPVVLCGDLNVAHEEIDLANPATNHKNAGFTNEERSK 173 Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L G+ D R + YS+W +A S +N G RID+ ++S E L A+I Sbjct: 174 FTELLKSGYIDTFRYFYPDRKDEYSWWSNFAKSRERNIGWRIDYFVVSEELKGNLSDAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 G SDH PV + L+ Sbjct: 234 HQSVMG----SDHCPVELVLE 250 >gi|257465990|ref|ZP_05630301.1| exodeoxyribonuclease III [Fusobacterium gonidiaformans ATCC 25563] gi|315917146|ref|ZP_07913386.1| exodeoxyribonuclease III [Fusobacterium gonidiaformans ATCC 25563] gi|313691021|gb|EFS27856.1| exodeoxyribonuclease III [Fusobacterium gonidiaformans ATCC 25563] Length = 250 Score = 178 bits (452), Expect = 7e-43, Method: Composition-based stats. Identities = 71/261 (27%), Positives = 112/261 (42%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN IRA + + + + DI CLQETK + L+ + + + Sbjct: 1 MKLISWNVNGIRACLKKGFMEYFEAQDADIFCLQETKCSAGQVELD-LKGYHQYWNYAVK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +PI + L ++ D + R I F + Sbjct: 60 KGYSGTAIFTKKEPISVSYGLGIEEHDQEGRVITLEFEDFYMVTVYTPNSKNELERLDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + R +L +P++ GD N+ + D NP +A FT E R Sbjct: 120 M------VWEDEFRSYLAKLNEAKPVVVCGDMNVAHEEIDLKNPKTNRRNAGFTDEERSK 173 Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L GFTD+ R + H YS+W Y A++ N G RID+ ++S + + A I Sbjct: 174 FTELLKAGFTDSFRYLYPDRLHAYSWWSYRANARKNNTGWRIDYFVVSNDWKEQIQEAEI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 + G SDH PV + L Sbjct: 234 HAEQEG----SDHCPVALYLK 250 >gi|327540346|gb|EGF26932.1| exodeoxyribonuclease III [Rhodopirellula baltica WH47] Length = 256 Score = 178 bits (452), Expect = 7e-43, Method: Composition-based stats. Identities = 71/262 (27%), Positives = 124/262 (47%), Gaps = 13/262 (4%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IET 59 + + +WNVN IRA + +++ PD++CLQETK E + L YH T Sbjct: 4 TLKLISWNVNGIRASMDKGFREFVESEQPDVLCLQETKAEPEQVDLSWADELGYHQVWNT 63 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 ++ Y+GV+ S+ +P+++ L ++ D + R + TF + Sbjct: 64 ATKRGYSGVSTWSRVEPLKVTKGLSIEEHDNEGRVLTTTFDDFHL-----VNVYTPNSQR 118 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + D ++ W + FL + + L +P++F GD N + D NP +A F+ + Sbjct: 119 GLARLDYRMQWDEAFLDYVKK-LNRRKPVLFCGDVNCAHKEIDLANPKANRKNAGFSDQE 177 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R + GF D+ R HD YS+W Y +D+ ++N G R+D+ ++ + + A Sbjct: 178 RAGLDAVTEAGFIDSFRQFHDGPGHYSWWTYRSDARARNIGWRLDYFWVAKKFWDRVADA 237 Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261 RI + G SDH PV ++L Sbjct: 238 RIRCEIHG----SDHCPVELTL 255 >gi|299068294|emb|CBJ39515.1| putative exodeoxyribonuclease III/endonuclease/phosphatase [Ralstonia solanacearum CMR15] Length = 261 Score = 178 bits (452), Expect = 7e-43, Method: Composition-based stats. Identities = 60/264 (22%), Positives = 112/264 (42%), Gaps = 12/264 (4%) Query: 3 VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ + + N+N +R A W+ + + D +C+QE K + E L YH Sbjct: 1 MLRIISANLNGVRSAASKGFFEWMGKQDADFVCVQELKCAQDDMTPEFLAPHGYHSVFQH 60 Query: 62 --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G + ++++P +++ G + D + R++EA + L I ++Y+P G+ Sbjct: 61 AVKKGYSGAGLYARHKPDDVIVGFDGGEFDAEGRYVEARYG----KLSIISVYVPSGSSG 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + R E ++ GD NI+ + D N + ++ E Sbjct: 117 EERQQAKFRFMDLFMQHLTDLRHEKGREVVLCGDVNIVHKEIDIKNWKGNQKNSGCLPEE 176 Query: 180 RQSFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R +L + G+ D R Y++W +++KN G RID+ + +P + S Sbjct: 177 RAWLTRLFDEVGYVDVFRTLDPRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGIAATARS 236 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 I K SDH P+ V D Sbjct: 237 TSIFRDI----KFSDHAPLTVDYD 256 >gi|257452215|ref|ZP_05617514.1| exodeoxyribonuclease III [Fusobacterium sp. 3_1_5R] gi|317058758|ref|ZP_07923243.1| exodeoxyribonuclease III [Fusobacterium sp. 3_1_5R] gi|313684434|gb|EFS21269.1| exodeoxyribonuclease III [Fusobacterium sp. 3_1_5R] Length = 250 Score = 178 bits (452), Expect = 7e-43, Method: Composition-based stats. Identities = 71/261 (27%), Positives = 112/261 (42%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN IRA + + + + DI CLQETK + L+ + + + Sbjct: 1 MKLISWNVNGIRACLKKGFMEYFEAQDADIFCLQETKCSAGQVELD-LKGYHQYWNYAVK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +PI + L ++ D + R I F + Sbjct: 60 KGYSGTAIFTKKEPISVSYGLGIEEHDQEGRVITLEFEDFYMVTVYTPNSKNELERLDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + R +L +P++ GD N+ + D NP +A FT E R Sbjct: 120 M------IWEDEFRSYLAKLNEAKPVVVCGDMNVAHEEIDLKNPKTNRRNAGFTDEERTK 173 Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L GFTD+ R + H YS+W Y A++ N G RID+ ++S + + A I Sbjct: 174 FTELLKAGFTDSFRYLYPDRLHAYSWWSYRANARKNNTGWRIDYFVVSNDWKEQIQEAEI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 + G SDH PV + L Sbjct: 234 HAEQEG----SDHCPVALYLK 250 >gi|261366200|ref|ZP_05979083.1| exodeoxyribonuclease III [Subdoligranulum variabile DSM 15176] gi|282572018|gb|EFB77553.1| exodeoxyribonuclease III [Subdoligranulum variabile DSM 15176] Length = 251 Score = 178 bits (452), Expect = 7e-43, Method: Composition-based stats. Identities = 69/264 (26%), Positives = 111/264 (42%), Gaps = 17/264 (6%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60 + +WNVN +RA + + + D C+QETK + Y +I + Sbjct: 1 MKFVSWNVNGLRACLKKGFEETFRTLDADFFCIQETKMQPGQ---ADFAPEGYTEYIYSA 57 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+G AI ++ + + L D + + R I + + NLY+P+ Sbjct: 58 DKKGYSGTAIWARTPALSVRYGLEEDLHNHEGRAITLEYP----DFYLVNLYVPNSQNEL 113 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + D + LR Q L+ ++P+I GD N+ D NP A F+ + R Sbjct: 114 ARI--DYRMQWEDDLRRYLQALDAQKPVILCGDLNVAHTEIDLKNPGPNRGAAGFSDQER 171 Query: 181 QSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 +L GFTD R H +YS+W + +N G RID+ ++S + A Sbjct: 172 GKLDELLAAGFTDTFRHLHPDATGIYSWWSMRFRARERNAGWRIDYFLVSNRLAPQIRKA 231 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 I G SDH PV + LD+ Sbjct: 232 DILMDILG----SDHCPVTLELDL 251 >gi|167835000|ref|ZP_02461883.1| exodeoxyribonuclease III [Burkholderia thailandensis MSMB43] Length = 256 Score = 178 bits (452), Expect = 7e-43, Method: Composition-based stats. Identities = 63/264 (23%), Positives = 112/264 (42%), Gaps = 14/264 (5%) Query: 3 VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59 ++ V T N+N IR A W+ E + D +C+QE K + P E ++ + + Sbjct: 1 MLRVITANLNGIRSAAKKGFFDWLGEQSADCVCVQEIKVSADDLPAEFVEPHGFRSYFHH 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G + S+ +P +++ + D + R++EA F L + ++Y+P G+ Sbjct: 61 AEKKGYSGAGLYSRREPDDVIIGYGSSEFDSEGRYVEARFG----KLSVVSVYVPSGSSG 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + L+ + +I GD NI+ + D N + ++ E Sbjct: 117 DERQQA--KYRFMDEFMPHLAELKAKREVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEE 174 Query: 180 RQSFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R KL + G+ D R Y++W +++KN G RID+ + +P S Sbjct: 175 RAWLTKLFDEVGYVDVFRTLDQRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGVAGTAKS 234 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 I K SDH P+ V D Sbjct: 235 TAIFRDV----KFSDHAPLTVDYD 254 >gi|320529778|ref|ZP_08030856.1| exodeoxyribonuclease III [Selenomonas artemidis F0399] gi|320138017|gb|EFW29921.1| exodeoxyribonuclease III [Selenomonas artemidis F0399] Length = 250 Score = 178 bits (451), Expect = 7e-43, Method: Composition-based stats. Identities = 72/260 (27%), Positives = 117/260 (45%), Gaps = 13/260 (5%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + KE + D CLQETK ++ + L + + + Sbjct: 1 MRFVSWNVNGLRAALKKGFMESFKELDADAFCLQETKMQEGQAILD-LPGYEQYFYSAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI ++ +P+ + + D + R I F L + +Y P+ + Sbjct: 60 KGYSGTAIFTRVKPLSVARGIGIPQHDNEGRVITMEFD----DLYLVTVYTPNSQNALAR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 D +++W F F + L ++P++ GD N+ D NP +A FT E R Sbjct: 116 -LDYRMAWEDAFRSFLLE-LRSKKPVVVCGDLNVAHTEIDLKNPKSNRRNAGFTDEERGK 173 Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L GF D RA + Y++W Y + N G RID+ ++S E + +A I Sbjct: 174 FGELLAAGFVDTFRALYPDKVGAYTWWSYLRHARETNAGWRIDYFLVSEELRGRIAAAEI 233 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 G SDH PV ++L Sbjct: 234 HADVFG----SDHCPVSLTL 249 >gi|313895351|ref|ZP_07828908.1| exodeoxyribonuclease III [Selenomonas sp. oral taxon 137 str. F0430] gi|312976246|gb|EFR41704.1| exodeoxyribonuclease III [Selenomonas sp. oral taxon 137 str. F0430] Length = 250 Score = 178 bits (451), Expect = 7e-43, Method: Composition-based stats. Identities = 72/260 (27%), Positives = 117/260 (45%), Gaps = 13/260 (5%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + KE + D CLQETK ++ + L + + + Sbjct: 1 MRFVSWNVNGLRAALKKGFMESFKELDADAFCLQETKMQEGQAILD-LPGYEQYFYSAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI ++ +P+ + + D + R I F L + +Y P+ + Sbjct: 60 KGYSGTAIFTRVKPLSVARGIGIPQHDNEGRVITMEFD----DLYLVTVYTPNSQNALAR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 D +++W F F + L ++P++ GD N+ D NP +A FT E R Sbjct: 116 -LDYRMAWEDAFRAFLLE-LRSKKPVVVCGDLNVAHTEIDLKNPKSNRRNAGFTDEERGK 173 Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L GF D RA + Y++W Y + N G RID+ ++S E + +A I Sbjct: 174 FGELLAAGFVDTFRALYPDKVGAYTWWSYLRHARETNAGWRIDYFLVSEELRGRIAAAEI 233 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 G SDH PV ++L Sbjct: 234 HADVFG----SDHCPVSLTL 249 >gi|210634817|ref|ZP_03298323.1| hypothetical protein COLSTE_02250 [Collinsella stercoris DSM 13279] gi|210158621|gb|EEA89592.1| hypothetical protein COLSTE_02250 [Collinsella stercoris DSM 13279] Length = 280 Score = 178 bits (451), Expect = 7e-43, Method: Composition-based stats. Identities = 61/277 (22%), Positives = 110/277 (39%), Gaps = 22/277 (7%) Query: 2 SVVTVATWNVNSIRARIHN---LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 + +A+WNVN +RA + + E + DI+ LQETK ++ + L + Sbjct: 7 RTLKLASWNVNGLRAVLKKDPSFTDIVSELDADILGLQETKLQEGQVEID-LPGYHQVWS 65 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT-------------FTINTQT 105 +K Y+G A+ ++ +P+ + A + + + Sbjct: 66 YAERKGYSGTAVFTRDEPLSVRHADAVLAAGRAAGLTDDQLELVAVAATEGRVCALEFER 125 Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165 ++Y P+ + S E +P++ GD+N+ D N Sbjct: 126 FWFVDVYTPNAQGELARLDTRMAWDDAYRAFLLSLEDETGKPVVTCGDFNVAHNEIDLKN 185 Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRID 224 P +A F+ E R F +L + G+TD RA + YS+W Y ++ N G RID Sbjct: 186 PKSNRGNAGFSDEERSKFVELLDAGYTDTFRAANPDLEGAYSWWSYRFNARKNNAGWRID 245 Query: 225 HIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + ++S + + I + G SDH PV + + Sbjct: 246 YFLVSDSIADRVRATGIRSDIFG----SDHCPVTLEI 278 >gi|255993955|ref|ZP_05427090.1| exodeoxyribonuclease III [Eubacterium saphenum ATCC 49989] gi|255993623|gb|EEU03712.1| exodeoxyribonuclease III [Eubacterium saphenum ATCC 49989] Length = 252 Score = 178 bits (451), Expect = 7e-43, Method: Composition-based stats. Identities = 66/261 (25%), Positives = 103/261 (39%), Gaps = 13/261 (4%) Query: 5 TVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 +WNVN IRA I ++ +PD +QETK ++ E + + YH K Sbjct: 3 KFISWNVNGIRACIKKGFLDVLEGESPDYFAVQETKMQEGQ---EEILTNGYHQYWDSAK 59 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 L + + T + T L + + Sbjct: 60 RKGYSGTLVLSKEEAVSTSKGIGIEEHDEEGRVVTADFKDFYLV---NVYVPNSKPELAR 116 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 D + W F + + L E+P+I GD N+ D NP + FT E R+ F Sbjct: 117 LDYRQHWEDDFRDYVVK-LNKEKPVIICGDLNVAHTEIDLKNPKTNRRNPGFTDEEREKF 175 Query: 184 QKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 +L GFTD R + Y++W Y ++ N G RID+ ++S + + A+I Sbjct: 176 TELLEAGFTDTFRYKYPDKEGAYTWWSYRFNARKNNAGWRIDYFLVSNDVKDKIEDAKIL 235 Query: 243 TKPRGWTKPSDHTPVIVSLDI 263 + G SDH PV++ LDI Sbjct: 236 SDVYG----SDHCPVVLELDI 252 >gi|294851237|ref|ZP_06791910.1| exodeoxyribonuclease III [Brucella sp. NVSL 07-0026] gi|294819826|gb|EFG36825.1| exodeoxyribonuclease III [Brucella sp. NVSL 07-0026] Length = 268 Score = 178 bits (451), Expect = 8e-43, Method: Composition-based stats. Identities = 76/266 (28%), Positives = 123/266 (46%), Gaps = 9/266 (3%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64 +ATWN+NS+R R+ + ++++ PD++CLQETK D FP + ++L Y HI GQK Sbjct: 5 IATWNINSVRLRMPLVEQFLRDYQPDVLCLQETKCPDDLFPAKGFRALGYEHIAISGQKG 64 Query: 65 YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124 Y+GVA +S+ + R + A + LRI N Y+P G + Sbjct: 65 YHGVATVSRRPLDGVEK--VDFCNMGDCRHLSAVVEAGDRKLRIHNFYVPAGGDEPDPEI 122 Query: 125 DDKISWIKRF---LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180 + K + F +R + + GD NI P +D ++ T E Sbjct: 123 NPKFAHKLAFLEKMRAIIADRKDGCSSLLVGDLNIAPLENDVWSHKQLLKIVSHTPIETE 182 Query: 181 QSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHS 238 G++D +R +Y++W Y A W ++G R+DH+ S + S + Sbjct: 183 TLEDLRIKGGWSDLMRHLIAADQKIYTWWSYRAKDWDAADRGRRLDHVWGSADLESHIKG 242 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIP 264 ++ RGW +PSDH PVI + D+ Sbjct: 243 LQVLRDARGWDRPSDHVPVIATFDLD 268 >gi|154251747|ref|YP_001412571.1| exodeoxyribonuclease III Xth [Parvibaculum lavamentivorans DS-1] gi|154155697|gb|ABS62914.1| exodeoxyribonuclease III Xth [Parvibaculum lavamentivorans DS-1] Length = 268 Score = 178 bits (451), Expect = 8e-43, Method: Composition-based stats. Identities = 70/266 (26%), Positives = 115/266 (43%), Gaps = 6/266 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62 + +ATWN+NS+R RI+ + I E +PD++CLQE K + FP + L++ Y HI GQ Sbjct: 3 IKIATWNINSVRLRINLVERLIAEESPDVLCLQEIKCINDAFPLKALKAAGYEHIAVHGQ 62 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT--INTQTLRIGNLYLPHGNPIT 120 K Y+GVA LS+ ++ + + D + + + + I Sbjct: 63 KGYHGVATLSRIPFKKVDSMNFCEKGDCRHLATDLDMPGGMRVHNFYVPAGGDEPDPEIN 122 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + + R + + ++ GD NI P HD ++ T Sbjct: 123 PKFAHKLAFVREMTRLYDGHRTKSQNRMVLVGDLNIAPLEHDVWSHKQLLKVVSHTPVEV 182 Query: 181 QSFQKLQ--NMGFTDAIRATHDTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLLH 237 +L + R D LYS+W Y A W + ++G R+DHI ++P Sbjct: 183 ALMNELIASHDWVDVMRRFVPDNEKLYSWWSYRAKDWLAADRGRRLDHIWVTPALADTPV 242 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263 S + RGW + SDH PV+ +L + Sbjct: 243 SMTVRKDARGWERASDHAPVVATLRL 268 >gi|167771017|ref|ZP_02443070.1| hypothetical protein ANACOL_02371 [Anaerotruncus colihominis DSM 17241] gi|167666687|gb|EDS10817.1| hypothetical protein ANACOL_02371 [Anaerotruncus colihominis DSM 17241] Length = 250 Score = 178 bits (451), Expect = 8e-43, Method: Composition-based stats. Identities = 65/260 (25%), Positives = 110/260 (42%), Gaps = 13/260 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + + D +CLQETK + E L + + Sbjct: 1 MKLVSWNVNGLRACLGKGFLDFFSAADADAVCLQETKMHQEQADLE-LPGYQQFWNSAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G A+ ++ P+ + + + D + R I + + N Y P+ + Sbjct: 60 KGYSGTAVFTRVPPLNVTYGIGMAEHDSEGRVITVEYE----PFYLVNCYTPNAQRELAR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + R L+ ++P++ GD N+ Q D NP +A F+ E R Sbjct: 116 L--EYRMKWEDDFRAYLMSLDAKKPVVLCGDLNVAHQEIDLKNPKTNRRNAGFSDEERAK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +L GF D RA + Y++W Y + N G RID+ ++S +H +RI Sbjct: 174 MTELLAGGFVDTFRALYPDVTGAYTWWSYLRRARDTNAGWRIDYFIVSERLRGAVHDSRI 233 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 G SDH PV + L Sbjct: 234 RADVMG----SDHCPVELDL 249 >gi|23502852|ref|NP_698979.1| exodeoxyribonuclease III [Brucella suis 1330] gi|254700641|ref|ZP_05162469.1| exodeoxyribonuclease III [Brucella suis bv. 5 str. 513] gi|254708986|ref|ZP_05170797.1| exodeoxyribonuclease III [Brucella pinnipedialis B2/94] gi|254713585|ref|ZP_05175396.1| exodeoxyribonuclease III [Brucella ceti M644/93/1] gi|254716061|ref|ZP_05177872.1| exodeoxyribonuclease III [Brucella ceti M13/05/1] gi|256030513|ref|ZP_05444127.1| exodeoxyribonuclease III [Brucella pinnipedialis M292/94/1] gi|256059974|ref|ZP_05450158.1| exodeoxyribonuclease III [Brucella neotomae 5K33] gi|260169418|ref|ZP_05756229.1| exodeoxyribonuclease III [Brucella sp. F5/99] gi|261217826|ref|ZP_05932107.1| exodeoxyribonuclease III Xth [Brucella ceti M13/05/1] gi|261316482|ref|ZP_05955679.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis B2/94] gi|261321326|ref|ZP_05960523.1| exodeoxyribonuclease III Xth [Brucella ceti M644/93/1] gi|261323946|ref|ZP_05963143.1| exodeoxyribonuclease III Xth [Brucella neotomae 5K33] gi|261751147|ref|ZP_05994856.1| exodeoxyribonuclease III Xth [Brucella suis bv. 5 str. 513] gi|261758940|ref|ZP_06002649.1| exodeoxyribonuclease III [Brucella sp. F5/99] gi|265987555|ref|ZP_06100112.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis M292/94/1] gi|23348878|gb|AAN30894.1| exodeoxyribonuclease III [Brucella suis 1330] gi|260922915|gb|EEX89483.1| exodeoxyribonuclease III Xth [Brucella ceti M13/05/1] gi|261294016|gb|EEX97512.1| exodeoxyribonuclease III Xth [Brucella ceti M644/93/1] gi|261295705|gb|EEX99201.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis B2/94] gi|261299926|gb|EEY03423.1| exodeoxyribonuclease III Xth [Brucella neotomae 5K33] gi|261738924|gb|EEY26920.1| exodeoxyribonuclease III [Brucella sp. F5/99] gi|261740900|gb|EEY28826.1| exodeoxyribonuclease III Xth [Brucella suis bv. 5 str. 513] gi|264659752|gb|EEZ30013.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis M292/94/1] Length = 268 Score = 178 bits (451), Expect = 8e-43, Method: Composition-based stats. Identities = 76/266 (28%), Positives = 123/266 (46%), Gaps = 9/266 (3%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64 +ATWN+NS+R R+ + ++++ PD++CLQETK D FP + ++L Y HI GQK Sbjct: 5 IATWNINSVRLRMPLVEQFLRDYQPDVLCLQETKCPDDLFPAKGFRALGYEHIAISGQKG 64 Query: 65 YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124 Y+GVA +S+ + R + A + LRI N Y+P G + Sbjct: 65 YHGVATVSRRPLDGVEK--VDFCNMGDCRHLSAVVEAGDRKLRIHNFYVPAGGDEPDPEI 122 Query: 125 DDKISWIKRF---LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180 + K + F +R + + GD NI P +D ++ T E Sbjct: 123 NPKFAHKLAFLEEMRAIIADRKDGCSSLLVGDLNIAPLENDVWSHKQLLKIVSHTPIETE 182 Query: 181 QSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHS 238 G++D +R +Y++W Y A W ++G R+DH+ S + S + Sbjct: 183 TLEDLRIKGGWSDLMRHLIAADQKIYTWWSYRAKDWDAADRGRRLDHVWGSADLESHIKG 242 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIP 264 ++ RGW +PSDH PVI + D+ Sbjct: 243 LQVLRDARGWDRPSDHVPVIATFDLD 268 >gi|330994641|ref|ZP_08318564.1| Exodeoxyribonuclease III [Gluconacetobacter sp. SXCC-1] gi|329758282|gb|EGG74803.1| Exodeoxyribonuclease III [Gluconacetobacter sp. SXCC-1] Length = 302 Score = 178 bits (451), Expect = 8e-43, Method: Composition-based stats. Identities = 76/264 (28%), Positives = 117/264 (44%), Gaps = 6/264 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62 + + TWN+NS+R R+ LA E PD++CLQETK D FP E +++L + H+ G Sbjct: 39 MRIVTWNINSLRLRMPLLARLCAETAPDMVCLQETKVPDALFPLEAVRALGFGHVAYRGM 98 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K YNGVAILS+ ++++ P R + + + + Y+P G I Sbjct: 99 KGYNGVAILSRQP-VQVLEDTPDWCARGDCRHLAVRHGSGETAIDVHDFYVPAGGDIPDP 157 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIF--AGDYNIIPQPHDCYNPIIWENDACFTL-EV 179 + K + F+ A GD NI P HD ++ T E Sbjct: 158 DENPKFAHKLAFVEEARHWFSARAMRRTVLVGDLNIAPLEHDVWSHKQLLKIVSHTPAET 217 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLLHS 238 + Q LY++W Y W + ++G R+DH+ ++P+ L Sbjct: 218 ERLLAWQQTGFIDAMRHFVPPAEKLYTWWSYRNRDWSASDRGRRLDHVWVTPDLRDALRG 277 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 ++ R W KPSDH PVIV +D Sbjct: 278 MQVLRPARDWDKPSDHVPVIVDMD 301 >gi|146304199|ref|YP_001191515.1| exodeoxyribonuclease III Xth [Metallosphaera sedula DSM 5348] gi|145702449|gb|ABP95591.1| exodeoxyribonuclease III Xth [Metallosphaera sedula DSM 5348] Length = 248 Score = 178 bits (451), Expect = 8e-43, Method: Composition-based stats. Identities = 72/263 (27%), Positives = 113/263 (42%), Gaps = 18/263 (6%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60 + + +WNVN ++A + L +K+ DI+ QE K+ P + Q L Y ++ Sbjct: 1 MKILSWNVNGLKAILGKGLLDLVKKQEYDILMFQEVKSS--QLPID-FQLLPYRSYLYPA 57 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+G L++ +PI + ++ D + R I F I + G + Sbjct: 58 KKKGYSGTLTLTRIEPISAKYGIGDEEFDSEGRVIALEFQKVY---VINVYFPNAGEELK 114 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + ++ RF L +P + GD+N+ + D P N A FT E R Sbjct: 115 RLDF-----KLRFNQRFHEFVKNLGKPCVICGDFNVAHEEIDIARPKDNVNHAGFTPEER 169 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + F + GF D R YS+W Y + KN G RID+ ++S E + A Sbjct: 170 KWFHEFLASGFVDTFRIFVKEGGHYSWWSYRFHAREKNIGWRIDYCVVSKELEKHVKKAE 229 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263 I K G SDH PV + LDI Sbjct: 230 ILEKVMG----SDHAPVTLELDI 248 >gi|119385102|ref|YP_916158.1| exodeoxyribonuclease III Xth [Paracoccus denitrificans PD1222] gi|119374869|gb|ABL70462.1| exodeoxyribonuclease III Xth [Paracoccus denitrificans PD1222] Length = 261 Score = 178 bits (451), Expect = 8e-43, Method: Composition-based stats. Identities = 89/266 (33%), Positives = 121/266 (45%), Gaps = 10/266 (3%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCG 61 + T+ATWN+NS+R R +A ++ E PDI+CLQETK+ +N P E ++L Y H G Sbjct: 1 MFTIATWNINSVRLREALVARFLTEEAPDILCLQETKSPVENIPLEAFRALGYDHFVARG 60 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 QK YNGVAILSK GD + I N Y+P G I Sbjct: 61 QKGYNGVAILSKLPIE-----DAGDRDYAGLGHARHVAARLENGVTIHNFYVPAGGDIPD 115 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL-E 178 + + K FL + P GD NI P+ D ++ T E Sbjct: 116 REQNVKFGQKLDFLTEMRDVFHADRPARSIMVGDLNIAPREDDVWSHKQLLKIVSHTPIE 175 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLH 237 V + D R LYS+W Y A W +KG R+DHI +P+ + H Sbjct: 176 VEHLGAAQDAGKWVDITRKDIPQGLLYSWWSYRARDWDAADKGRRLDHIWATPDIANAGH 235 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263 ++RI RGW +PSDH PV+ S D+ Sbjct: 236 NSRILRPLRGWQQPSDHVPVLASFDL 261 >gi|254718052|ref|ZP_05179863.1| exodeoxyribonuclease III [Brucella sp. 83/13] gi|265982999|ref|ZP_06095734.1| exodeoxyribonuclease III Xth [Brucella sp. 83/13] gi|306837613|ref|ZP_07470484.1| exodeoxyribonuclease III (xth) [Brucella sp. NF 2653] gi|264661591|gb|EEZ31852.1| exodeoxyribonuclease III Xth [Brucella sp. 83/13] gi|306407320|gb|EFM63528.1| exodeoxyribonuclease III (xth) [Brucella sp. NF 2653] Length = 268 Score = 178 bits (451), Expect = 8e-43, Method: Composition-based stats. Identities = 75/266 (28%), Positives = 122/266 (45%), Gaps = 9/266 (3%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64 +ATWN+NS+R R+ + ++++ PD++CLQETK D FP + ++L Y HI GQK Sbjct: 5 IATWNINSVRLRMSLVEQFLRDYQPDVLCLQETKCPDDQFPAKGFRALGYEHIAISGQKG 64 Query: 65 YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124 Y+GVA +S+ + R + A + LRI N Y+P G Sbjct: 65 YHGVATVSRRPLDGVEK--VDFCNMGDCRHLSAVVETGDRKLRIHNFYVPAGGDEPDPAI 122 Query: 125 DDKISWIKRF---LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180 + K + F +R + + GD NI P +D ++ T E Sbjct: 123 NPKFAHKLAFLEEMRAIIADRKDGCSSLLVGDLNIAPLENDVWSHKQLLKIVSHTPIETE 182 Query: 181 QSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHS 238 G++D +R ++++W Y A W ++G R+DH+ S + S + Sbjct: 183 TLEDLRIKGGWSDLMRHLIAADQKIFTWWSYRAKDWDAADRGRRLDHVWGSADLESHIKG 242 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIP 264 ++ RGW +PSDH PVI + D+ Sbjct: 243 LQVLRDARGWDRPSDHVPVIATFDLD 268 >gi|254465319|ref|ZP_05078730.1| exodeoxyribonuclease III [Rhodobacterales bacterium Y4I] gi|206686227|gb|EDZ46709.1| exodeoxyribonuclease III [Rhodobacterales bacterium Y4I] Length = 297 Score = 178 bits (451), Expect = 8e-43, Method: Composition-based stats. Identities = 81/272 (29%), Positives = 120/272 (44%), Gaps = 16/272 (5%) Query: 3 VVT------VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY- 55 ++ +ATWN+NS+R R + ++E PD++CLQE K+ + P + +L Y Sbjct: 31 MMRRAMPFTLATWNINSVRLREPIVQKLLQEEGPDVLCLQECKSPVEKIPVKGFAALGYR 90 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 H+ GQK YNGVAILS+ + G+ + I N Y+P Sbjct: 91 HMIARGQKGYNGVAILSRLPIED-----AGEQDFAALGHARHVAGRLENGVVIHNFYVPA 145 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDA 173 G + ++K +L ++P GD NI P+ D ++ Sbjct: 146 GGDVPDRDVNEKFGQKLDYLTAMRDWFHADKPEKSVLVGDLNIAPREDDVWDHKKLLKVV 205 Query: 174 CFTL-EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPE 231 T EV + G+ D R LYS+W Y A W +KG R+DHI +P+ Sbjct: 206 SHTPVEVEHLADTQEAGGWIDITRRDIPGGKLYSWWSYRARDWDAADKGRRLDHIWATPD 265 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 HS+RI RGW KPSDH PV + D+ Sbjct: 266 IAGAGHSSRILRDARGWEKPSDHAPVFATFDL 297 >gi|322378535|ref|ZP_08052983.1| exodeoxyribonuclease [Helicobacter suis HS1] gi|321149049|gb|EFX43501.1| exodeoxyribonuclease [Helicobacter suis HS1] Length = 306 Score = 178 bits (451), Expect = 8e-43, Method: Composition-based stats. Identities = 69/262 (26%), Positives = 118/262 (45%), Gaps = 13/262 (4%) Query: 2 SVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 ++ + +WNVN +RA + +++++ DI C+QETK + + F + + Sbjct: 50 KLMRLVSWNVNGLRACMQKGFCDFLEQSQADIFCVQETKMQQEQASF-CFEGYEVFWNSA 108 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GV LSK P+++ + + D + R I + N + + G Sbjct: 109 QKKGYSGVLTLSKIAPLQVSYGIGIAEHDTEGRVITCEYP-NFYLVNVYTPNAQRGLLRL 167 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + + +R R Q L ++ ++ GD N+ D NP +A F+ R Sbjct: 168 PYRLE-----WERSFRGFLQNLMQKKAVVVCGDLNVAHNEIDLTNPQSNRYNAGFSDPER 222 Query: 181 QSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 +F++L N+G D R + T Y++W Y + +KN G RID+ + S S L SA Sbjct: 223 DAFRQLLNLGLIDTFRHFYPTKAESYTWWSYINQARAKNIGWRIDYFLTSQTLNSCLQSA 282 Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261 I G SDH PV + L Sbjct: 283 YIYNHILG----SDHCPVGLDL 300 >gi|291519655|emb|CBK74876.1| exodeoxyribonuclease III [Butyrivibrio fibrisolvens 16/4] Length = 250 Score = 178 bits (451), Expect = 8e-43, Method: Composition-based stats. Identities = 65/261 (24%), Positives = 113/261 (43%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + + + DII LQE K + ++ + + + Sbjct: 1 MKFVSWNVNGLRAVMGKGFMDFFDGIDADIIGLQEIKLSEGQLEWDK-PGYHAYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G A+ +K +PI + + ++ D + R I F Y P+ Sbjct: 60 KGYSGTAVFTKKEPISVSYGIGIEEHDHEGRVITLEFE----DFYFITCYTPNSQNELKR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 D + R Q+L ++ +I GD N+ + D NP ++A FT E R Sbjct: 116 L--DYRMTWEDDFRAYLQKLNEKKGVILCGDLNVAHEEIDIKNPKTNRHNAGFTDEERAK 173 Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +L + GF D+ R + +YS+W Y + KN G RID+ ++S + + ++I Sbjct: 174 MTELLSAGFVDSFRYFYPDQTDIYSWWSYRFKAREKNAGWRIDYFIVSEDIKDRMKDSKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 T G SDH P+ + + Sbjct: 234 HTDVMG----SDHCPIELDFE 250 >gi|148560443|ref|YP_001259818.1| exodeoxyribonuclease III [Brucella ovis ATCC 25840] gi|225628198|ref|ZP_03786233.1| exodeoxyribonuclease III [Brucella ceti str. Cudo] gi|148371700|gb|ABQ61679.1| exodeoxyribonuclease III [Brucella ovis ATCC 25840] gi|225617023|gb|EEH14070.1| exodeoxyribonuclease III [Brucella ceti str. Cudo] Length = 289 Score = 178 bits (451), Expect = 8e-43, Method: Composition-based stats. Identities = 76/266 (28%), Positives = 123/266 (46%), Gaps = 9/266 (3%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64 +ATWN+NS+R R+ + ++++ PD++CLQETK D FP + ++L Y HI GQK Sbjct: 26 IATWNINSVRLRMPLVEQFLRDYQPDVLCLQETKCPDDLFPAKGFRALGYEHIAISGQKG 85 Query: 65 YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124 Y+GVA +S+ + R + A + LRI N Y+P G + Sbjct: 86 YHGVATVSRRPLDGVEK--VDFCNMGDCRHLSAVVEAGDRKLRIHNFYVPAGGDEPDPEI 143 Query: 125 DDKISWIKRF---LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180 + K + F +R + + GD NI P +D ++ T E Sbjct: 144 NPKFAHKLAFLEEMRAIIADRKDGCSSLLVGDLNIAPLENDVWSHKQLLKIVSHTPIETE 203 Query: 181 QSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHS 238 G++D +R +Y++W Y A W ++G R+DH+ S + S + Sbjct: 204 TLEDLRIKGGWSDLMRHLIAADQKIYTWWSYRAKDWDAADRGRRLDHVWGSADLESHIKG 263 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIP 264 ++ RGW +PSDH PVI + D+ Sbjct: 264 LQVLRDARGWDRPSDHVPVIATFDLD 289 >gi|158522569|ref|YP_001530439.1| exodeoxyribonuclease III [Desulfococcus oleovorans Hxd3] gi|158511395|gb|ABW68362.1| exodeoxyribonuclease III [Desulfococcus oleovorans Hxd3] Length = 262 Score = 178 bits (451), Expect = 8e-43, Method: Composition-based stats. Identities = 56/265 (21%), Positives = 98/265 (36%), Gaps = 9/265 (3%) Query: 2 SVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 + + +WNVN +RA + K + D++ +QETK + + Y Sbjct: 4 RKIKLVSWNVNGLRAVMGKGFLETFKNLDADVVGIQETKLQAPQVTGDMANIEGYTSYWA 63 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + G + ++ + + + G + + + + Sbjct: 64 HATTKKGYSGVAAFSRMPVKNAKTGMGREEYDNEGRIVELDLGDFIFFNIYFPN--GQMG 121 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K+ + + F +A + L+ GDYN D NP EN + F R Sbjct: 122 EDRLTYKLDFYRDFFAYADAYRKQGRSLVICGDYNTAHNEIDLKNPKANENTSGFMRIER 181 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL--LHS 238 K+ G+ D R + YS+W Y + +N G RID+ ++ + S L Sbjct: 182 DWLDKISADGYVDTFRHLYPDTVKYSWWTYRFKARERNVGWRIDYFFVTEDIISKGWLKD 241 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263 A ID G SDH PV + L+I Sbjct: 242 AFIDNTVYG----SDHCPVGLVLEI 262 >gi|300859239|ref|YP_003784222.1| exodeoxyribonuclease III [Corynebacterium pseudotuberculosis FRC41] gi|300686693|gb|ADK29615.1| exodeoxyribonuclease III [Corynebacterium pseudotuberculosis FRC41] gi|302206930|gb|ADL11272.1| Putative exodeoxyribonuclease III [Corynebacterium pseudotuberculosis C231] gi|302331494|gb|ADL21688.1| Putative exodeoxyribonuclease III [Corynebacterium pseudotuberculosis 1002] gi|308277184|gb|ADO27083.1| Putative exodeoxyribonuclease III [Corynebacterium pseudotuberculosis I19] Length = 255 Score = 178 bits (451), Expect = 8e-43, Method: Composition-based stats. Identities = 77/263 (29%), Positives = 126/263 (47%), Gaps = 15/263 (5%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + WNVNS R R+ + +++ +N D++ +QETK +D FP+E Q++ Y + G Sbjct: 1 MRIVNWNVNSARTRVDRMVDFLQRHNVDVLAVQETKCKDDQFPYERFQAIGYQVAHFGLN 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-----TQTLRIGNLYLPHGNP 118 +NGVAI+S+ ++ H PG + E +R+ +LY+P+G Sbjct: 61 QWNGVAIISRVGLEDVQKHFPGQPGFNKDPQKEQAVEARAIGALCGGVRVWSLYVPNGRE 120 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 I YD K+ W+ A ++ EP +F GD+NI P+ D ++ +E T Sbjct: 121 IADPHYDYKLRWLFALQLHAQ---DVTEPTVFLGDFNIAPRDQDVWDMSFFEGKTHVTEP 177 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 RQ+ T + YS+WDY A + KN+G+ ID + + + T + + Sbjct: 178 ERQA----FEALTTSGLHIASPLEG-YSYWDYQAGRFLKNQGMLIDFQLATTDLT--VEN 230 Query: 239 ARIDTKPRGWTKPSDHTPVIVSL 261 + ID R SDH PVIV Sbjct: 231 SFIDVDERSGKAASDHAPVIVDY 253 >gi|296282147|ref|ZP_06860145.1| exonuclease III [Citromicrobium bathyomarinum JL354] Length = 265 Score = 178 bits (451), Expect = 9e-43, Method: Composition-based stats. Identities = 69/265 (26%), Positives = 116/265 (43%), Gaps = 4/265 (1%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCG 61 +V+V TWN+NS+R R+ + ++ PD++CLQE K ++ FP + + L Y HI G Sbjct: 1 MVSVTTWNINSVRLRMPLVEQFLTAQAPDVLCLQEIKCVEEQFPAKAFRDLGYDHIAIHG 60 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 QK Y+GVA +S+ E H D+ + + ++ T ++ + G+ Sbjct: 61 QKGYHGVATVSRLPFREFSRHDWQDNGEARHIGVQLTDPVHQGMVIENVYVPAGGDVPDR 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + R +E+P + GD+NI P D ++ T + Sbjct: 121 EVNAKFGQKLDFLERMTRWAETVEQPTLIVGDFNIAPLESDVWSHKQLLKVVSHTPIEVE 180 Query: 182 SFQKLQNMGFTDAIRATH--DTHHLYSFWDYYADSWSKN-KGIRIDHIMLSPEATSLLHS 238 + Q+ + I H YS+W Y +W N KG R+DH+ SP+ Sbjct: 181 ALQRFMDAHGWTDIGREHVPAPERYYSWWSYRNPNWQTNDKGRRLDHMWASPDLAKQATR 240 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263 I + R W +PSDH P+ ++ Sbjct: 241 HTILEEARNWERPSDHVPLTTEFEL 265 >gi|220922845|ref|YP_002498147.1| exodeoxyribonuclease III Xth [Methylobacterium nodulans ORS 2060] gi|219947452|gb|ACL57844.1| exodeoxyribonuclease III Xth [Methylobacterium nodulans ORS 2060] Length = 269 Score = 178 bits (451), Expect = 9e-43, Method: Composition-based stats. Identities = 80/267 (29%), Positives = 123/267 (46%), Gaps = 7/267 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62 +TV+TWN+NS+R RI + ++ E PD++CLQETK + FP + LQ Y HI GQ Sbjct: 3 LTVSTWNINSVRLRIDLVRRFLDEVRPDVLCLQETKCPNDRFPLKELQGFGYPHIVFAGQ 62 Query: 63 KSYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 K YNGVAILS+ + V + + + + Y+P G + Sbjct: 63 KGYNGVAILSRLPLRSQEVMSFCERQDARHISAVLGPEAGAAAGIVLHDFYVPAGGDVPD 122 Query: 122 TKYDDKISWIKRFLRFASQR--LELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-E 178 +DK + F+ P I GD N+ P HD ++ + T E Sbjct: 123 AALNDKFAHKLAFMDELRAWGGRRSTSPAILVGDLNVAPLEHDVWSHKQLLDVVSHTPVE 182 Query: 179 VRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLL 236 + G+ D +R +Y++W Y + W + +KG R+DHI ++P+ + Sbjct: 183 TERLETLRGEAGWIDTMRHLRPEPEKIYTWWSYRSPDWAAADKGRRLDHIWVTPDLAGTV 242 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263 S + R W KPSDH PV V L++ Sbjct: 243 RSVTVARHARAWEKPSDHVPVTVELEL 269 >gi|254780031|ref|YP_003058138.1| exodeoxyribonuclease III [Helicobacter pylori B38] gi|254001944|emb|CAX30201.1| Putative exodeoxyribonuclease [Helicobacter pylori B38] Length = 250 Score = 178 bits (450), Expect = 9e-43, Method: Composition-based stats. Identities = 68/260 (26%), Positives = 116/260 (44%), Gaps = 13/260 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + + D+ C+QE+K + + FE + + Sbjct: 1 MKLISWNVNGLRACMTKGFMDFFNSVDADVFCIQESKMQQEQNTFE-FKGYFDFWNCAIK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+GV +K +P+ + + ++ D + R I F + + N+Y P+ S Sbjct: 60 KGYSGVVTFTKKEPLSVSYGINIEEHDKEGRVITCEFE----SFYLVNVYTPNSQQALSR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 ++ + + LEL++P+I GD N+ D NP +A F+ E R+ Sbjct: 116 LSYRMSWEVE--FKKFLKALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L N GF D R + Y++W Y + K+ G RID+ + S + L A I Sbjct: 174 FNELLNAGFIDTFRYFYPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALI 233 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 G SDH PV + L Sbjct: 234 YKDILG----SDHCPVGLEL 249 >gi|225159347|ref|ZP_03725644.1| DNA-(apurinic or apyrimidinic site) lyase [Opitutaceae bacterium TAV2] gi|224802053|gb|EEG20328.1| DNA-(apurinic or apyrimidinic site) lyase [Opitutaceae bacterium TAV2] Length = 259 Score = 178 bits (450), Expect = 9e-43, Method: Composition-based stats. Identities = 65/264 (24%), Positives = 102/264 (38%), Gaps = 12/264 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPF-ETLQSLNYHIETCG 61 + + +WNVN +RA + L +I + D ICLQETK + + E H Sbjct: 1 MKLVSWNVNGVRAVLQKGLLDYIAASGADAICLQETKCQPGDVQHVEWPAGYTAHWNAAQ 60 Query: 62 QKSYNGVAILSKY----QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 ++ Y+G AI ++ P + + T + N Y+P+ Sbjct: 61 KRGYSGTAIFTRMGAGSSPALTPLAVTAGIGRDEHDTEGRVLTAEFPDFYLVNAYVPNAQ 120 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 P + + LE +P++ GD N+ + D P + F+ Sbjct: 121 PELARL--PYRQRWDADFLAYLRGLETRKPVVMCGDLNVAHEEIDLARPKENVGNPGFSN 178 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 E R F++ GF D R YS+W Y A + KN G RID+ + S L Sbjct: 179 EERAGFREFLRAGFLDTFREFEKGPGHYSWWSYRAGARGKNVGWRIDYFLASASLRPRLK 238 Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261 A I+ G SDH P+ + L Sbjct: 239 RAWIEPAVMG----SDHCPIGLEL 258 >gi|152990892|ref|YP_001356614.1| exodeoxyribonuclease III [Nitratiruptor sp. SB155-2] gi|151422753|dbj|BAF70257.1| exodeoxyribonuclease III [Nitratiruptor sp. SB155-2] Length = 262 Score = 178 bits (450), Expect = 9e-43, Method: Composition-based stats. Identities = 84/258 (32%), Positives = 130/258 (50%), Gaps = 8/258 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNP-DIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +AT+NVNSI AR+ + W+ E NP DI+CLQE K E+ FPF+ + L + GQ Sbjct: 1 MKIATFNVNSINARLELVKRWLSEKNPIDILCLQEIKCEENRFPFKDFEELGFQCAVFGQ 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K+YNGVAI SKY E+ D Q RFI+A N+Y PHG+ Sbjct: 61 KAYNGVAICSKYGFEEVQKGFGDPFWDGQKRFIQAKINGTH----FCNVYAPHGDFDGEK 116 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K+ + K + +Q +E ++ GD N+ + D ++ + N F + R++ Sbjct: 117 HI-YKLQFFKHLKEYMTQFDLKKENIVVVGDMNVAREDIDVWDAELLRNTIGFMDDEREA 175 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F+ ++G D R H +++WDY + +++G+RID+I+ SP S +D Sbjct: 176 FEDFLSIGLVDLFRECHPDTKQFTWWDYKNGAVWRDEGMRIDYILTSPAMKERCESIEVD 235 Query: 243 TKPRGW--TKPSDHTPVI 258 R PSDH PV+ Sbjct: 236 MWTRKRRSPTPSDHAPVV 253 >gi|15612480|ref|NP_224133.1| exodeoxyribonuclease III [Helicobacter pylori J99] gi|4156036|gb|AAD06994.1| EXODEOXYRIBONUCLEASE [Helicobacter pylori J99] Length = 250 Score = 178 bits (450), Expect = 1e-42, Method: Composition-based stats. Identities = 67/260 (25%), Positives = 115/260 (44%), Gaps = 13/260 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + + D+ C+QE+K + + FE + + Sbjct: 1 MKLISWNVNGLRACMTKGFMDFFNSVDADVFCIQESKMQQEQNTFE-FKGYFDFWNCAIK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+GV +K +P+ + + + D + R + F + + N+Y P+ S Sbjct: 60 KGYSGVVTFTKKEPLSVSYGIDIKEHDKEGRVVTCEFE----SFYLVNVYTPNSQQALSR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 ++ + + LEL++P+I GD N+ D NP +A F+ E R+ Sbjct: 116 LSYRMSWEVE--FKKFLKALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L N GF D R + Y++W Y + K+ G RID+ + S + L A I Sbjct: 174 FSELLNAGFIDTFRYFYPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALI 233 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 G SDH PV + L Sbjct: 234 YKDILG----SDHCPVGLEL 249 >gi|257789897|ref|YP_003180503.1| exodeoxyribonuclease III Xth [Eggerthella lenta DSM 2243] gi|317489355|ref|ZP_07947868.1| exodeoxyribonuclease III [Eggerthella sp. 1_3_56FAA] gi|325832619|ref|ZP_08165417.1| exodeoxyribonuclease III [Eggerthella sp. HGA1] gi|257473794|gb|ACV54114.1| exodeoxyribonuclease III Xth [Eggerthella lenta DSM 2243] gi|316911526|gb|EFV33122.1| exodeoxyribonuclease III [Eggerthella sp. 1_3_56FAA] gi|325485940|gb|EGC88400.1| exodeoxyribonuclease III [Eggerthella sp. HGA1] Length = 285 Score = 178 bits (450), Expect = 1e-42, Method: Composition-based stats. Identities = 59/289 (20%), Positives = 93/289 (32%), Gaps = 33/289 (11%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + + E + DI+ LQETK ++ + Q Y + Sbjct: 1 MRFVSWNVNGLRAVLKKGFEDIVCELDADIVALQETKLQEGQATLDLPQYREYWSYAEKK 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 + + + N Sbjct: 61 GYSGTAIFCKEQPLQALHGLGFPHLDTEGRIVALEFPKFWFVDVYTPNAQNELARIDHRM 120 Query: 123 KYDDKISWIK---------------------------RFLRFASQRLELEEPLIFAGDYN 155 ++DD +P++ GD+N Sbjct: 121 EWDDAFRDFCKGLEEGVLPAGVPVERPALGEGHVAISELPLTQPGETADPKPVVMCGDFN 180 Query: 156 IIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADS 214 + Q D NP A F+ E R F L +GF D+ R H YS+W Y + Sbjct: 181 VAHQEIDLKNPGPNRGKAGFSDEERGKFTDLLEVGFVDSFRHLHPDVTGAYSWWSYRFKA 240 Query: 215 WSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 N G RID+ ++S E + SA I + G SDH PV + L++ Sbjct: 241 RQTNAGWRIDYFLVSDELAPKIQSACIYDEVYG----SDHCPVGIELEL 285 >gi|308185296|ref|YP_003929429.1| exodeoxyribonuclease III [Helicobacter pylori SJM180] gi|308061216|gb|ADO03112.1| exodeoxyribonuclease III [Helicobacter pylori SJM180] Length = 250 Score = 178 bits (450), Expect = 1e-42, Method: Composition-based stats. Identities = 67/260 (25%), Positives = 116/260 (44%), Gaps = 13/260 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + + D+ C+QE+K + + FE + + Sbjct: 1 MKLISWNVNGLRACMTKGFMDFFNSVDADVFCIQESKMQQEQNTFE-FKGYFDFWNCAIK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+GV +K +P+ + + ++ D + R + F + + N+Y P+ S Sbjct: 60 KGYSGVVTFTKKEPLSVSYGIDIEEHDKEGRVVTCEFE----SFYLVNVYTPNSQQALSR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 ++ + + LEL++P+I GD N+ D NP +A F+ E R+ Sbjct: 116 LSYRMSWEVE--FKKFLKALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L N GF D R + Y++W Y + K+ G RID+ + S + L A I Sbjct: 174 FSELLNAGFIDTFRYFYPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALI 233 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 G SDH PV + L Sbjct: 234 YKDILG----SDHCPVGLEL 249 >gi|161619921|ref|YP_001593808.1| exodeoxyribonuclease III (xth) [Brucella canis ATCC 23365] gi|254705010|ref|ZP_05166838.1| exodeoxyribonuclease III [Brucella suis bv. 3 str. 686] gi|260567518|ref|ZP_05837988.1| exodeoxyribonuclease III [Brucella suis bv. 4 str. 40] gi|261755709|ref|ZP_05999418.1| exodeoxyribonuclease III Xth [Brucella suis bv. 3 str. 686] gi|161336732|gb|ABX63037.1| exodeoxyribonuclease III (xth) [Brucella canis ATCC 23365] gi|260157036|gb|EEW92116.1| exodeoxyribonuclease III [Brucella suis bv. 4 str. 40] gi|261745462|gb|EEY33388.1| exodeoxyribonuclease III Xth [Brucella suis bv. 3 str. 686] Length = 268 Score = 178 bits (450), Expect = 1e-42, Method: Composition-based stats. Identities = 76/266 (28%), Positives = 123/266 (46%), Gaps = 9/266 (3%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64 +ATWN+NS+R R+ + ++++ PD++CLQETK D FP + ++L Y HI GQK Sbjct: 5 IATWNINSVRLRMPLVEQFLRDYQPDVLCLQETKCPDDLFPAKGFRALGYEHIAISGQKG 64 Query: 65 YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124 Y+GVA +S+ + R + A + LRI N Y+P G + Sbjct: 65 YHGVATVSRRPLDGVEK--VDFCNMGDCRHLSAVVEAGDRKLRIHNFYVPAGGDEPDPEI 122 Query: 125 DDKISWIKRF---LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180 + K + F +R + + GD NI P +D ++ T E Sbjct: 123 NPKFAHKLAFLEEMRAIIADRKDGCSSLLIGDLNIAPLENDVWSHKQLLKIVSHTPIETE 182 Query: 181 QSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHS 238 G++D +R +Y++W Y A W ++G R+DH+ S + S + Sbjct: 183 TLEDLRIKGGWSDLMRHLIAADQKIYTWWSYRAKDWDAADRGRRLDHVWGSADLESHIKG 242 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIP 264 ++ RGW +PSDH PVI + D+ Sbjct: 243 LQVLRDARGWDRPSDHVPVIATFDLD 268 >gi|331006177|ref|ZP_08329501.1| Exodeoxyribonuclease III [gamma proteobacterium IMCC1989] gi|330420008|gb|EGG94350.1| Exodeoxyribonuclease III [gamma proteobacterium IMCC1989] Length = 271 Score = 178 bits (450), Expect = 1e-42, Method: Composition-based stats. Identities = 64/275 (23%), Positives = 103/275 (37%), Gaps = 19/275 (6%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC-- 60 + V + NVN IRA + W+K+ + D+ICLQE K + Y+ Sbjct: 1 MKVISINVNGIRAAARKGMFGWLKKVDADVICLQELKAQPDQIEDSLYHPEGYYSYFHSA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTH-LPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GV I K +P I DD D + E + Sbjct: 61 EKKGYSGVGIYCKEKPKAIHMGLGAIDDADWEDVDREGRYIQVDFKDVSVVSLYMPSGSA 120 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + + K +++F + I GD+NI + D N + ++ F E Sbjct: 121 KEERQEFKYVMMEKFEAVLRSMQRKKREFIICGDWNIAHKKVDIKNWRGNQKNSGFLPEE 180 Query: 180 RQSFQK---------LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230 R N+ F DA R + H Y++W +W+ N G RID+ ++S Sbjct: 181 RSWMDWLLNEEDSLRNDNLQFVDAFRIINQEEHQYTWWSNRGQAWANNTGWRIDYHIVSK 240 Query: 231 EATSLLHSAR--IDTKPRGWTKPSDHTPVIVSLDI 263 + + I + R SDH P+ + DI Sbjct: 241 GLRDKVVAGSDLIYKEER----FSDHAPLAIEYDI 271 >gi|288931161|ref|YP_003435221.1| exodeoxyribonuclease III [Ferroglobus placidus DSM 10642] gi|288893409|gb|ADC64946.1| exodeoxyribonuclease III [Ferroglobus placidus DSM 10642] Length = 253 Score = 178 bits (450), Expect = 1e-42, Method: Composition-based stats. Identities = 80/261 (30%), Positives = 133/261 (50%), Gaps = 11/261 (4%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 ++ V T+NVNSIR R+H + + DI+C+QETK ED+ FP YH+ G Sbjct: 1 MLKVCTYNVNSIRKRLHIVFPLM--EKVDILCMQETKVEDRKFPEADFHLKGYHVVFSGG 58 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K+ NGVAI SK++P E + + G+ L + N+Y P G I S Sbjct: 59 KARNGVAIASKFEPDEYFSGINGEKD--------RVIAARFGKLWVINVYAPQGQSIESE 110 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 Y K+ + K+ F S+ ++ + + GD N+ P+ D ++P N CF +V+++ Sbjct: 111 YYRYKLEFFKKLKEFLSEFVDFKGYYLLCGDMNVAPEDIDVHSPDKLRNHVCFHEDVKKA 170 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYY-ADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F+++ +GF D +R H +Y+F+DY D+ + G R+DHI+ + + + Sbjct: 171 FKEIVQLGFVDVLRKHHPKERIYTFYDYRVRDAVKRGLGWRVDHILATEKLAEKSKDCYV 230 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 + R KPSDH P++ + Sbjct: 231 LLEYRTTEKPSDHVPLVAEFE 251 >gi|114765837|ref|ZP_01444930.1| exodeoxyribonuclease III, putative [Pelagibaca bermudensis HTCC2601] gi|114541836|gb|EAU44873.1| exodeoxyribonuclease III, putative [Roseovarius sp. HTCC2601] Length = 262 Score = 178 bits (450), Expect = 1e-42, Method: Composition-based stats. Identities = 84/264 (31%), Positives = 120/264 (45%), Gaps = 10/264 (3%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQK 63 T+ATWN+NS+R R + + E PD++CLQE K+ + P E ++L Y H+ GQK Sbjct: 4 TLATWNINSVRLREALVCKLLTEEAPDVLCLQECKSPVEKIPMEAFRALGYGHVVARGQK 63 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 YNGVAILSK GD + + N Y+P G + + Sbjct: 64 GYNGVAILSKLPM-----RDMGDHDFAGLGHARHVAAELENGVTVQNFYVPAGGDVPDRE 118 Query: 124 YDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180 ++K +L E P GD NI P+ D ++ T EV Sbjct: 119 VNEKFGQKLDYLAEMRDWFRAEAPKKSILVGDLNIAPREDDVWSHKQLLKVVSHTPVEVE 178 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHSA 239 + + G+ D R LYS+W Y A W +KG R+DH+ +P+ S HS+ Sbjct: 179 ALAETQEAGGWVDITRKDIPEGQLYSWWSYRARDWDAADKGRRLDHVWATPDIASAGHSS 238 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 R+ RGW KPSDH PV + D+ Sbjct: 239 RVLRDARGWEKPSDHAPVFATFDL 262 >gi|302552034|ref|ZP_07304376.1| exodeoxyribonuclease III [Streptomyces viridochromogenes DSM 40736] gi|302469652|gb|EFL32745.1| exodeoxyribonuclease III [Streptomyces viridochromogenes DSM 40736] Length = 274 Score = 178 bits (450), Expect = 1e-42, Method: Composition-based stats. Identities = 56/268 (20%), Positives = 102/268 (38%), Gaps = 8/268 (2%) Query: 2 SVVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 V+TV + NVN +RA W+ + D++CLQE + E + P +H+ Sbjct: 7 RVLTVTSVNVNGLRAAAKKGFVEWLGQTEADVLCLQEVRAEPEQLPEHVRTPEGWHVTHA 66 Query: 61 GQ--KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 K GV++ ++ +P + ++ D R++EA T + G Sbjct: 67 PAAAKGRAGVSLYTRREPDRVQVGFGSEEFDGSGRYVEADLPGVTVA-SLYLPSGEVGTE 125 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 K ++ + ++ GD+NI Q D N + ++ F E Sbjct: 126 RQDEKERFMGEFLAHLKGLRERAAAEGREVLVCGDWNIAHQKADLKNWRGNQKNSGFLPE 185 Query: 179 VRQSFQKLQN----MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 R+ ++ + DT YS+W Y ++ + G RID + +P + Sbjct: 186 EREWLGRVLDPADGGYVDVVRALHPDTEGPYSWWSYRGRAFDNDSGWRIDLAVATPRLAA 245 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 A ++ + SDH PV V + Sbjct: 246 RAVKAVVERAASHEERWSDHAPVTVVFE 273 >gi|258645453|ref|ZP_05732922.1| exodeoxyribonuclease III [Dialister invisus DSM 15470] gi|260402804|gb|EEW96351.1| exodeoxyribonuclease III [Dialister invisus DSM 15470] Length = 254 Score = 178 bits (450), Expect = 1e-42, Method: Composition-based stats. Identities = 72/265 (27%), Positives = 121/265 (45%), Gaps = 13/265 (4%) Query: 1 MSVVTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 M + +WNVN +RA + KE + D CLQETK + + L + + Sbjct: 1 MKSLKYISWNVNGLRACMKKGFMQSFKELDADCFCLQETKLQPDQIELD-LPGYYQYWNS 59 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G A+ +K +P+ + + ++ D + R I A F + + Sbjct: 60 AVKKGYSGTALFTKIKPLSVTYGIGMEEHDQEGRVITADFNDH-----CLVTCYTPNSQR 114 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + ++ W F ++ L ++P+I GD N+ + D NP +A FT + Sbjct: 115 GLARLTYRMKWEDDFKKYLLD-LSKKKPVILCGDLNVAHEEIDLANPASNHMNAGFTDDE 173 Query: 180 RQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R +L + GFTD+ R H D YS+W Y+A S +N G RID+ ++S + + Sbjct: 174 RNKMTELLSDGFTDSFRYLHQDKKDAYSWWSYFAKSRERNIGWRIDYFLVSDILQPRIKA 233 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263 A I + G SDH PV + ++I Sbjct: 234 AEIHSSILG----SDHCPVELDIEI 254 >gi|294085378|ref|YP_003552138.1| exodeoxyribonuclease III Xth [Candidatus Puniceispirillum marinum IMCC1322] gi|292664953|gb|ADE40054.1| exodeoxyribonuclease III Xth [Candidatus Puniceispirillum marinum IMCC1322] Length = 259 Score = 178 bits (450), Expect = 1e-42, Method: Composition-based stats. Identities = 71/262 (27%), Positives = 114/262 (43%), Gaps = 7/262 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62 + +ATWN+NS+R R + ++ E++ D++CLQETKTEDK+FP + + H G+ Sbjct: 1 MKIATWNINSVRLRRDLVKQFLDESDVDVLCLQETKTEDKSFPVDFFAEAGWGHQAIRGE 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 KSYNGVAILS+ +I D + + + +P + Sbjct: 61 KSYNGVAILSRTPLADIAHINWAGKQDCRHISARTESGVTIHNFYVPAG-GDVADPDENP 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ- 181 K+ K++++ + + GD NI P D ++ T Sbjct: 120 KFAHKLTFLAEMTAHFVKNRPEN--AVLVGDLNIAPLAEDVWSTKQLLKVVSHTPVETDG 177 Query: 182 -SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHSA 239 + D +YS+W Y + W N+G R+DHI +S + + + A Sbjct: 178 LKALMAKGSWHDPVRAHFGDDEQIYSWWSYRSRDWQVNNRGRRLDHIWVSTDLANAVSKA 237 Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261 I T R KPSDH P I++L Sbjct: 238 EILTDYRNAEKPSDHVPTIITL 259 >gi|256158498|ref|ZP_05456396.1| exodeoxyribonuclease III [Brucella ceti M490/95/1] gi|256253917|ref|ZP_05459453.1| exodeoxyribonuclease III [Brucella ceti B1/94] gi|261221054|ref|ZP_05935335.1| exodeoxyribonuclease III Xth [Brucella ceti B1/94] gi|265997015|ref|ZP_06109572.1| exodeoxyribonuclease III Xth [Brucella ceti M490/95/1] gi|260919638|gb|EEX86291.1| exodeoxyribonuclease III Xth [Brucella ceti B1/94] gi|262551483|gb|EEZ07473.1| exodeoxyribonuclease III Xth [Brucella ceti M490/95/1] Length = 268 Score = 178 bits (450), Expect = 1e-42, Method: Composition-based stats. Identities = 76/266 (28%), Positives = 123/266 (46%), Gaps = 9/266 (3%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64 +ATWN+NS+R R+ + ++++ PD++CLQETK D FP + ++L Y HI GQK Sbjct: 5 IATWNINSVRLRMPLVEQFLRDYQPDVLCLQETKCPDDLFPAKGFRALGYEHIAISGQKG 64 Query: 65 YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124 Y+GVA +S+ + R + A + LRI N Y+P G + Sbjct: 65 YHGVATVSRRPLDGVEK--VDFCNMDDCRHLSAVVEAGDRKLRIHNFYVPAGGDEPDPEI 122 Query: 125 DDKISWIKRF---LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180 + K + F +R + + GD NI P +D ++ T E Sbjct: 123 NPKFAHKLAFLEEMRAIIADRKDGCSSLLVGDLNIAPLENDVWSHKQLLKIVSHTPIETE 182 Query: 181 QSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHS 238 G++D +R +Y++W Y A W ++G R+DH+ S + S + Sbjct: 183 TLEDLRIKGGWSDLMRHLIAADQKIYTWWSYRAKDWDAADRGRRLDHVWGSADLESHIKG 242 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIP 264 ++ RGW +PSDH PVI + D+ Sbjct: 243 LQVLRDARGWDRPSDHVPVIATFDLD 268 >gi|296113240|ref|YP_003627178.1| exodeoxyribonuclease III [Moraxella catarrhalis RH4] gi|295920934|gb|ADG61285.1| exodeoxyribonuclease III [Moraxella catarrhalis RH4] gi|326560231|gb|EGE10619.1| exonuclease III [Moraxella catarrhalis 7169] gi|326562876|gb|EGE13163.1| exonuclease III [Moraxella catarrhalis 46P47B1] gi|326563683|gb|EGE13935.1| exonuclease III [Moraxella catarrhalis 103P14B1] gi|326565237|gb|EGE15422.1| exonuclease III [Moraxella catarrhalis 12P80B1] gi|326566451|gb|EGE16601.1| exonuclease III [Moraxella catarrhalis BC1] gi|326570258|gb|EGE20303.1| exonuclease III [Moraxella catarrhalis BC8] gi|326570995|gb|EGE21019.1| exonuclease III [Moraxella catarrhalis BC7] gi|326573291|gb|EGE23259.1| exonuclease III [Moraxella catarrhalis 101P30B1] gi|326575810|gb|EGE25733.1| exonuclease III [Moraxella catarrhalis CO72] gi|326576891|gb|EGE26797.1| exonuclease III [Moraxella catarrhalis O35E] Length = 271 Score = 178 bits (450), Expect = 1e-42, Method: Composition-based stats. Identities = 84/271 (30%), Positives = 125/271 (46%), Gaps = 10/271 (3%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + T ++N+N +RAR H L A DII LQETK D FP +Q L YH+E GQ Sbjct: 1 MTTFVSFNINGLRARPHQLEAIRDILGADIIGLQETKVHDALFPVNMVQDLGYHVEFFGQ 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121 KS+ GVA+ SK P + P D Q R I A + + +++ + N Y P G + Sbjct: 61 KSHYGVALASKIAPTFVQKGFPFGHDDAQRRLIHARYDFDGRSIDVLNGYFPQGENRSHE 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175 K+ K + R+ + LI GD NI P+ D + + F Sbjct: 121 IKFPMKREFYADLNRYIDELQADGRELIIMGDMNISPEDIDVGIGAANAKRWLAKGTCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232 E R +Q L + G TD R + H +S++DY + + +G+RIDHI+ + Sbjct: 181 LPEERAWYQMLMSTGLTDTYRLFYPKSHDEFSWFDYRSRGFEDTPKRGLRIDHILCTDTL 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + +A I R KPSDH P+ ++ Sbjct: 241 KNDCVAAGISYDIRAMDKPSDHAPIWAKFNL 271 >gi|78049571|ref|YP_365746.1| exodeoxyribonuclease III [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78038001|emb|CAJ25746.1| exodeoxyribonuclease III [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 266 Score = 178 bits (450), Expect = 1e-42, Method: Composition-based stats. Identities = 66/273 (24%), Positives = 112/273 (41%), Gaps = 24/273 (8%) Query: 4 VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + ++N N +R A AW + D++C+QETK ++ Y Sbjct: 1 MRIISFNANGLRSAASKGFFAWFAAQDADVLCVQETKAQEHQLAGPDFLPTGYKAWFRDA 60 Query: 62 --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G+AI S+++P E+ T L + D + R+IEA F L + + Y+P G+ Sbjct: 61 STKKGYSGMAIYSRHEPDEVRTALGWPEFDEEGRYIEARFG----NLSVVSFYIPSGS-S 115 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + D K ++ Q L + GD+NI+ D N + ++ Sbjct: 116 GELRQDYKFQVMQWLRPILEQWLASGRQYVLCGDWNIVRTALDIKNWKSNQKNSGCLPPE 175 Query: 180 RQSFQKLQN-----------MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 R L G+ D+ R H Y++W + + N G RID+ ++ Sbjct: 176 RDWLNGLCADAPEDANPAEGRGWVDSYRVLHPQGQDYTWWSNRGAARANNVGWRIDYQLV 235 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +P L + I + R SDH P IV Sbjct: 236 TPGLRDTLKACSIYREER----FSDHAPYIVDY 264 >gi|311109328|ref|YP_003982181.1| exodeoxyribonuclease III 2 [Achromobacter xylosoxidans A8] gi|310764017|gb|ADP19466.1| exodeoxyribonuclease III 2 [Achromobacter xylosoxidans A8] Length = 262 Score = 178 bits (450), Expect = 1e-42, Method: Composition-based stats. Identities = 61/264 (23%), Positives = 105/264 (39%), Gaps = 9/264 (3%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59 ++ + + N+N IR+ L W++++ D++CLQE K ++ + Y H Sbjct: 1 MLRITSINLNGIRSAFRKGLQPWMEKHAADVLCLQEIKVSHEDLTDDLRHPPGYTGHFHH 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GV I + + T L ++ D + R I A + N + G+ Sbjct: 61 AVKKGYSGVGIYLRDAAERVNTGLDCEEFDPEGRIIRADWK-NLSVISAYLPSGSSGDER 119 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 KY + + I GD+NI + D N ++ F E Sbjct: 120 QQAKYRFLDRFGPWIDALMHEHKTTGREFIICGDWNIAHKEIDLKNWKGNLKNSGFLPEE 179 Query: 180 RQSFQKLQN-MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R + + GF D R D Y++W +W+KN G RID+ + +P + + Sbjct: 180 RAWLTDVFDKRGFVDVFRTIDDRPDQYTWWSNRGQAWAKNVGWRIDYQIATPGIAARARN 239 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 I R SDH P+ + D Sbjct: 240 VAIYKDER----FSDHAPLTIDYD 259 >gi|114330706|ref|YP_746928.1| exodeoxyribonuclease III Xth [Nitrosomonas eutropha C91] gi|114307720|gb|ABI58963.1| exodeoxyribonuclease III Xth [Nitrosomonas eutropha C91] Length = 257 Score = 178 bits (450), Expect = 1e-42, Method: Composition-based stats. Identities = 64/263 (24%), Positives = 112/263 (42%), Gaps = 13/263 (4%) Query: 4 VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60 + + T N+N +R A L W+ + D+IC+QE K + + Y + Sbjct: 1 MRIITLNLNGLRSAASKGLFDWLPQQEADVICVQELKAQQNDINGVMRTPDGYSGYFHCA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GV I +++ P +IV ++D + RF+ F L + ++YLP G+ Sbjct: 61 VKKGYSGVGIYTRHAPDQIVEGTGIAEIDAEGRFLRVDFG----NLTVISIYLPSGS-SG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K +++ F E ++ GD+NI + D N + ++ F E R Sbjct: 116 EHRQAAKFFFMEHFFPLLQSLAEGGREVLLCGDWNIAHKEIDLKNWRSNQKNSGFLPEER 175 Query: 181 QS-FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + D R + Y++W +W+KN G RID+ + +P S A Sbjct: 176 AWLSTVFDELKLVDVFRTINPEPDQYTWWSNRGQAWAKNVGWRIDYQIATPGLASTATGA 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 I R SDH P+++ D Sbjct: 236 SIYKTER----FSDHAPLLIDYD 254 >gi|16127936|ref|NP_422500.1| exodeoxyribonuclease III [Caulobacter crescentus CB15] gi|221236757|ref|YP_002519194.1| exodeoxyribonuclease III [Caulobacter crescentus NA1000] gi|13425472|gb|AAK25668.1| exodeoxyribonuclease III [Caulobacter crescentus CB15] gi|220965930|gb|ACL97286.1| exodeoxyribonuclease III [Caulobacter crescentus NA1000] Length = 268 Score = 178 bits (450), Expect = 1e-42, Method: Composition-based stats. Identities = 75/272 (27%), Positives = 122/272 (44%), Gaps = 18/272 (6%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62 + +ATWNVNS+R R A ++ E PD++C+QE K ++ FP E +++ H++ GQ Sbjct: 3 LRIATWNVNSVRLRAEQAARFVDEQAPDVLCMQEIKCQEGEFPREAFEAMGLPHLKIAGQ 62 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K ++GVAI S+ ++ T + + + + + I N Y+P G Sbjct: 63 KGWHGVAIASRLPIEDVPTLMTCREGHARCVA------VKVAGVEIQNFYIPAGGDTPDR 116 Query: 123 KYDDKISWIKRFLRFASQRLELEEPL---IFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K F + L+ +P I GD NI P +D ++ T Sbjct: 117 IGNPKFDHKLDFYETLTAALKKRDPKAPLIVTGDLNIAPGENDVWSHRQMLKVVSHTPPE 176 Query: 180 RQSFQ--KLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLL 236 ++F AT + L+S+W Y A + K N+G+R+DHI+ SP Sbjct: 177 LEAFDALIKSMDLLDLPRLATPEPQKLFSWWSYRAADFRKSNRGLRLDHILASPGLRDAA 236 Query: 237 -----HSARIDTKPRGWTKPSDHTPVIVSLDI 263 S+R+ R W +PSDH PV L + Sbjct: 237 SLDGKVSSRVHDDVREWERPSDHAPVTADLKV 268 >gi|257437815|ref|ZP_05613570.1| exodeoxyribonuclease III [Faecalibacterium prausnitzii A2-165] gi|257199738|gb|EEU98022.1| exodeoxyribonuclease III [Faecalibacterium prausnitzii A2-165] Length = 263 Score = 178 bits (450), Expect = 1e-42, Method: Composition-based stats. Identities = 68/263 (25%), Positives = 114/263 (43%), Gaps = 16/263 (6%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60 + + +WNVN +RA + H+ AA + DI +QETK + Y + + Sbjct: 14 MKLISWNVNGLRACLTHDFAASFAALDADIFSVQETKMQPGQ---ADFAPEGYTEYTYSA 70 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+G A K P+ + T + ++ D + R + + + Sbjct: 71 EKKGYSGTACWCKTAPLAVTTGIGREEHDHEGRVLTLEYPGFYL-----VNCYTPNSQDG 125 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + D +++W F + + L+ ++P+I GD N+ D N A FT + R Sbjct: 126 LKRLDYRMTWEDAFRAYLLE-LDAKKPVILCGDLNVAHTEIDIKNAKTNRMSAGFTDQER 184 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 +L GFTD RA H YS+W Y + KN G RID+ ++S + +A Sbjct: 185 AKMTELLAAGFTDTFRAVHPDEVKYSWWSYRFHAREKNAGWRIDYFIVSNRIADKVTAAE 244 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263 I + G SDH PV + +D+ Sbjct: 245 IHNEVFG----SDHCPVELVIDL 263 >gi|254511339|ref|ZP_05123406.1| exodeoxyribonuclease III [Rhodobacteraceae bacterium KLH11] gi|221535050|gb|EEE38038.1| exodeoxyribonuclease III [Rhodobacteraceae bacterium KLH11] Length = 262 Score = 178 bits (450), Expect = 1e-42, Method: Composition-based stats. Identities = 83/264 (31%), Positives = 121/264 (45%), Gaps = 10/264 (3%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQK 63 T+ATWN+NS+R R + ++E PD++CLQE K+ + P E L Y H+ GQK Sbjct: 4 TLATWNINSVRLREPIVLKLLQEEAPDVLCLQECKSPVEKIPTEGFAELGYTHMIARGQK 63 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 YNGVAILS+ E+ + + I N Y+P G + + Sbjct: 64 GYNGVAILSRLPMEEVGDKDFAGLGHARHIAGRLENG-----VTIHNFYVPAGGDVPDRE 118 Query: 124 YDDKISWIKRFLRFASQRLELEEP--LIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180 ++K +L E+P I GD NI P+ D ++ T EV Sbjct: 119 VNEKFGQKLDYLTDMRDWFHAEKPGKSILVGDLNIAPREDDVWSHKQLLKVVSHTPIEVE 178 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHSA 239 + G+ D R LYS+W Y A W +KG R+DH+ + + ++ HS+ Sbjct: 179 HLAETQDAGGWVDITRQDIPEGQLYSWWSYRARDWDAADKGRRLDHVWATSDISNAGHSS 238 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 RI RGW KPSDH PV + D+ Sbjct: 239 RILRDARGWEKPSDHAPVFATFDV 262 >gi|153008297|ref|YP_001369512.1| exodeoxyribonuclease III Xth [Ochrobactrum anthropi ATCC 49188] gi|151560185|gb|ABS13683.1| exodeoxyribonuclease III Xth [Ochrobactrum anthropi ATCC 49188] Length = 268 Score = 178 bits (450), Expect = 1e-42, Method: Composition-based stats. Identities = 77/266 (28%), Positives = 122/266 (45%), Gaps = 9/266 (3%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64 VATWN+NS+R R+ + ++++ PD++CLQETK D FP + ++L Y HI GQK Sbjct: 5 VATWNINSVRLRMPLVEQFLRDYQPDVLCLQETKCPDNLFPSKGFRALGYEHIAISGQKG 64 Query: 65 YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124 Y+GVA +S+ + G R + A + LRI N Y+P G Sbjct: 65 YHGVATISRRHLTGVEK--IGFCDMGDCRHLSAVVEAGGKKLRIHNFYVPAGGDEPDPVI 122 Query: 125 DDKISWIKRF---LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180 + K + F +R + + GD NI P +D ++ T E Sbjct: 123 NPKFAHKLAFLEEMRAIVADRKDGHSSVLVGDLNIAPLENDVWSHKQLLKIVSHTPIETE 182 Query: 181 QSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLLHS 238 G++D +R ++++W Y A W ++G R+DH+ S + + Sbjct: 183 TLEDLRVKGGWSDLMRQLIPADQKIFTWWSYRAKDWAESDRGRRLDHVWGSADLEGYMQG 242 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIP 264 +I RGW +PSDH PVI + D+ Sbjct: 243 LQILRDARGWDRPSDHVPVIATFDLD 268 >gi|225848729|ref|YP_002728893.1| exodeoxyribonuclease III [Sulfurihydrogenibium azorense Az-Fu1] gi|225643820|gb|ACN98870.1| exodeoxyribonuclease III [Sulfurihydrogenibium azorense Az-Fu1] Length = 264 Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats. Identities = 89/265 (33%), Positives = 141/265 (53%), Gaps = 10/265 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIK--ENNPDIICLQETKTEDKNFPFETLQSLNY-HIETC 60 + + T+N+NSI+AR + W+K + D++C QE K E+KNFPF+ +S+ + + E Sbjct: 1 MKICTFNLNSIKARKDLVLQWLKHRNYDIDVLCFQEIKVEEKNFPFDEFRSVGFIYQEVL 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 GQK+YNGVA LSK+ ++ L D D Q R + + I N Y PHG+ Sbjct: 61 GQKAYNGVATLSKFPMDRVLDGLNHDYFDNQKRVLITKI----NDVYIINTYAPHGDLRG 116 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFA-GDYNIIPQPHDCYNPIIWENDACFTLEV 179 KY K+ W K F+ F + ++ + GD NI + D Y+PI+ ++ E Sbjct: 117 GEKYYYKLDWYKHFISFLKENFDVNNQKVILLGDLNIALEDKDVYDPILLKDSIGTMPEE 176 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R+ + L ++GF D+ R + +++WDY + KN+G+RID+I++S L Sbjct: 177 RELLRNLLDLGFIDSFRFLYPDKIQFTWWDYIGGAIWKNEGMRIDYILISKPLVKYLKDV 236 Query: 240 RIDTKPRGW--TKPSDHTPVIVSLD 262 +D PR KPSDH PVI + + Sbjct: 237 EVDLWPRRRRDPKPSDHAPVIATFE 261 >gi|317182729|dbj|BAJ60513.1| exodeoxyribonuclease [Helicobacter pylori F57] Length = 250 Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats. Identities = 69/260 (26%), Positives = 115/260 (44%), Gaps = 13/260 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + + D+ C+QE+K + + FE + + Sbjct: 1 MKLISWNVNGLRACMTKGFMDFFNSVDADVFCIQESKMQQEQNTFE-FKGYFDFWNCAIK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+GV +K +P+ + + ++ D + R + F + + N+Y P+ S Sbjct: 60 KGYSGVVTFTKKEPLSVSYGINMEEHDKEGRVVTCEFE----SFYLVNVYTPNSQQALSR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 ++ R + LEL++P+I GD N+ D NP +A F+ E R Sbjct: 116 LSYRMSWEVE--FRKFLKALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L N GF D R + Y++W Y + KN G RID+ + S + L A I Sbjct: 174 FNELLNAGFIDTFRYFYPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTHLKDALI 233 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 G SDH PV + L Sbjct: 234 YKDILG----SDHCPVGLEL 249 >gi|251779069|ref|ZP_04821989.1| exodeoxyribonuclease III [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243083384|gb|EES49274.1| exodeoxyribonuclease III [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 251 Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats. Identities = 71/257 (27%), Positives = 117/257 (45%), Gaps = 13/257 (5%) Query: 5 TVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +WNVN +RA + +KE+N DI C+QE+K ++ +Y +K Sbjct: 3 KLISWNVNGLRACVKKGFLDILKESNADIFCVQESKLQEGQIDLNLDGYYDY-WNYAEKK 61 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 Y+G A+ SK +P+ I + ++ D + R + F + N+Y P+ + Sbjct: 62 GYSGTAVFSKEKPLNISLGIGIEEHDKEGRVLTLEFE----EFYLVNVYTPNSQQKLARI 117 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 D + R L ++ +I GD N+ + D NP N+A F+ E R+ F Sbjct: 118 --DYRMAWENDFRHYLNELNKDKSVIVCGDLNVAHKEIDLKNPKNNRNNAGFSDEEREKF 175 Query: 184 QKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 +L GF D R + YS+W Y ++ + N G RID+ ++S + L A I Sbjct: 176 GELLKSGFIDTYRYFYPGKEGAYSWWSYRFNARANNAGWRIDYFLVSKDFEDRLVDANIH 235 Query: 243 TKPRGWTKPSDHTPVIV 259 T+ G SDH PV + Sbjct: 236 TQIEG----SDHCPVEL 248 >gi|325205029|gb|ADZ00483.1| exodeoxyribonuclease III [Neisseria meningitidis M01-240355] Length = 259 Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats. Identities = 64/264 (24%), Positives = 120/264 (45%), Gaps = 13/264 (4%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ + + NVN IR+ +I + DI+C+QE K ++ + + H Sbjct: 1 MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADLSADMKNPHGMHGHWHC 60 Query: 62 --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 ++ Y+GVA+ SK +P + + ++ D + RF+ F L + +LYLP G+ Sbjct: 61 AEKRGYSGVAVYSKRKPDNVQIGMGIEEFDREGRFVRCDFG----RLSVISLYLPSGSSA 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K ++ F ++ GD+N+ Q D N + ++ F E Sbjct: 117 EERQQV-KYCFLDAFYPMLEAMKNEGRDIVVCGDWNVAHQNIDLKNWKGNQKNSGFLPEE 175 Query: 180 RQSF-QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R+ + + +G+TD R + Y++W +++K+ G RID+ M++PE + S Sbjct: 176 REWIGKVIHKLGWTDMWRTLYPDVPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVS 235 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 A + K SDH P++V D Sbjct: 236 AHVYKD----EKFSDHAPLVVEYD 255 >gi|325299788|ref|YP_004259705.1| exodeoxyribonuclease III Xth [Bacteroides salanitronis DSM 18170] gi|324319341|gb|ADY37232.1| exodeoxyribonuclease III Xth [Bacteroides salanitronis DSM 18170] Length = 251 Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats. Identities = 70/258 (27%), Positives = 108/258 (41%), Gaps = 13/258 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA N D CLQETK + + + Sbjct: 1 MKLISWNVNGLRACCDKGFRDAFTRLNADFFCLQETKMQAGQLDL-AFDGYTSYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +++QP+ + + D+ D + R I N + + G Sbjct: 60 KGYSGTAIFTRHQPLNVSYGMGIDEHDREGRVITLEME-NFYLVTVYTPNSQDGLKRLDY 118 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + R L+ ++P++ GD N+ + D NP +A FT + R+ Sbjct: 119 R-----MTWEDAFRRYLLELDAKKPVLVCGDLNVAHKEIDLKNPKTNRMNAGFTDQEREK 173 Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 FQ L + GF D R + +YS+W Y + KN G RID+ + S L SA I Sbjct: 174 FQTLLDAGFIDTFRYFYPEQEGIYSWWSYRFRAREKNAGWRIDYFLASARLAGKLESAAI 233 Query: 242 DTKPRGWTKPSDHTPVIV 259 T+ G SDH PV V Sbjct: 234 HTEIFG----SDHCPVEV 247 >gi|239999924|ref|ZP_04719848.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae 35/02] gi|240116863|ref|ZP_04730925.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae PID1] gi|268595731|ref|ZP_06129898.1| exodeoxyribonuclease [Neisseria gonorrhoeae 35/02] gi|268602539|ref|ZP_06136706.1| nuclease [Neisseria gonorrhoeae PID1] gi|293397969|ref|ZP_06642175.1| exodeoxyribonuclease III [Neisseria gonorrhoeae F62] gi|268549120|gb|EEZ44538.1| exodeoxyribonuclease [Neisseria gonorrhoeae 35/02] gi|268586670|gb|EEZ51346.1| nuclease [Neisseria gonorrhoeae PID1] gi|291611915|gb|EFF40984.1| exodeoxyribonuclease III [Neisseria gonorrhoeae F62] gi|317165222|gb|ADV08763.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae TCDC-NG08107] Length = 259 Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats. Identities = 60/264 (22%), Positives = 112/264 (42%), Gaps = 13/264 (4%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ + + NVN IR+ +I + DI+C+QE K ++ + + H Sbjct: 1 MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADLSADMKNPHGMHGYWHC 60 Query: 62 --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 ++ Y+GVA+ SK +P + + ++ D + RF+ F Sbjct: 61 AEKRGYSGVAVYSKRKPDNVQIGMGIEEFDREGRFVRCDFGRLGVI-----SLYLPSGSS 115 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K ++ F ++ GD+NI Q D N + ++ F E Sbjct: 116 AEERQQVKYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEE 175 Query: 180 RQSFQKLQN-MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R+ K+ + +G+TD R + Y++W +++K+ G RID+ M++PE + S Sbjct: 176 REWIGKVMHTLGWTDMWRTLYPDVPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVS 235 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 A + K SDH P++V D Sbjct: 236 AHVYKD----EKFSDHAPLVVEYD 255 >gi|255066692|ref|ZP_05318547.1| exodeoxyribonuclease III [Neisseria sicca ATCC 29256] gi|255049020|gb|EET44484.1| exodeoxyribonuclease III [Neisseria sicca ATCC 29256] Length = 259 Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats. Identities = 60/264 (22%), Positives = 113/264 (42%), Gaps = 13/264 (4%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ + + NVN IR+ +I + DI+C+QE K ++ + E H Sbjct: 1 MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADLSDEMKNPHGMHGHWHC 60 Query: 62 --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 ++ Y+GVA+ SK P + + ++ D + RF+ F + Sbjct: 61 AEKRGYSGVAVYSKRAPDNVQIGMGIEEFDREGRFVRCDFGKLSVI-----SLYLPSGTS 115 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + + K ++ F ++ GD+NI Q D N + ++ F E Sbjct: 116 APERQELKYRFLDAFYPMLEAMKAEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEE 175 Query: 180 RQSF-QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R+ + + +G+TD R + + Y++W +++K+ G RID+ M++PE + S Sbjct: 176 REWIGKVIHTLGWTDMWRTLYPDNPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVS 235 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 A + K SDH P++V D Sbjct: 236 AHVYKD----EKFSDHAPLVVEYD 255 >gi|240851283|ref|YP_002972686.1| exodeoxyribonuclease III [Bartonella grahamii as4aup] gi|240268406|gb|ACS51994.1| exodeoxyribonuclease III [Bartonella grahamii as4aup] Length = 269 Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats. Identities = 80/267 (29%), Positives = 119/267 (44%), Gaps = 9/267 (3%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCG 61 + +ATWN+NSIR R+ + +++ + D++CLQETK D FP ++ Y HI G Sbjct: 2 LFRIATWNINSIRLRLAQVFQYLELFSADVLCLQETKCPDALFPVGAFEAAGYKHIALSG 61 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 QKSYNGVAI+S+ ++ + R+I + + LRI N Y+P G I Sbjct: 62 QKSYNGVAIVSRLPFKKVEKRFFCQ--NQDCRYISVIVEAHGRNLRIHNFYVPAGGDIPD 119 Query: 122 TKYDDKISWIKRF---LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL- 177 ++K F + + GD NI P D ++ T Sbjct: 120 ADVNEKFQHKLDFLEEMSSIRADQGDGLSSLLVGDLNIAPLAEDVWSHQQLLKVVSHTPI 179 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSL 235 E + G+ D +R LY++W Y A W+ + G R+DHI SP+ Sbjct: 180 ETERLQDLCCQGGWVDLMRLHIPVPTKLYTWWSYRARDWAFTDYGRRLDHIWSSPDLAPF 239 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262 + I RGW +PSDH PV D Sbjct: 240 VVDLSIFRDARGWERPSDHIPVQTVFD 266 >gi|256370404|ref|YP_003107915.1| exodeoxyribonuclease III [Brucella microti CCM 4915] gi|256000567|gb|ACU48966.1| exodeoxyribonuclease III [Brucella microti CCM 4915] Length = 268 Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats. Identities = 75/266 (28%), Positives = 123/266 (46%), Gaps = 9/266 (3%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64 +ATWN+NS+R R+ + ++++ PD++CLQETK D FP + ++L Y HI GQK Sbjct: 5 IATWNINSVRLRMPLVEQFLRDYQPDVLCLQETKCPDDLFPAKGFRALGYEHIAISGQKG 64 Query: 65 YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124 Y+GVA +S+ + R + A + LRI N Y+P G + Sbjct: 65 YHGVATVSRRPLDGVEK--VDFCNMGDCRHLSAVVEAGDRKLRIHNFYVPAGGDEPDPEI 122 Query: 125 DDKISWIKRF---LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180 + K + F +R + + GD NI P +D ++ T E Sbjct: 123 NPKFAHKLAFLEEMRAIIADRKDGCSSLLVGDLNIAPLENDVWSHKQLLKIVSHTPIETE 182 Query: 181 QSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHS 238 G++D +R +Y++W Y A W ++G R+DH+ S + S + Sbjct: 183 TLEDLRIKGGWSDLMRHLIAADQKIYTWWSYRAKDWDAADRGRRLDHVWGSADLESHIKG 242 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIP 264 ++ RGW +PSDH PVI + ++ Sbjct: 243 LQVLRDARGWDRPSDHVPVIATFNLD 268 >gi|289666316|ref|ZP_06487897.1| exodeoxyribonuclease III [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 266 Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats. Identities = 66/273 (24%), Positives = 111/273 (40%), Gaps = 24/273 (8%) Query: 4 VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + ++N N +R A AW + D++C+QETK ++ Y Sbjct: 1 MRIISFNANGLRSAASKGFFAWFAAQDADVLCVQETKAQEHQLAGPDFLPTGYKAWFRDA 60 Query: 62 --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GVAI S+Y+P E+ T L + D + R+IEA F L + + Y+P G+ Sbjct: 61 STKKGYSGVAIYSRYEPDEVRTALGWPEFDEEGRYIEARFG----NLSVVSFYIPSGS-S 115 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K ++ + L + GD+NI+ D N + ++ Sbjct: 116 GELRQGYKFQVMEWLRPILDEWLASGRQYVLCGDWNIVRTALDIKNWKSNQKNSGCLPPE 175 Query: 180 RQSFQKLQN-----------MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 R L G+ D+ R H Y++W + + N G RID+ ++ Sbjct: 176 RDWLNGLCADVPEDANAAEGRGWVDSYRVLHPQGQDYTWWSNRGAARTNNVGWRIDYQLV 235 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +P L + I + R SDH P IV Sbjct: 236 TPGLRDTLKACSIYREER----FSDHAPYIVDY 264 >gi|217031877|ref|ZP_03437380.1| hypothetical protein HPB128_199g85 [Helicobacter pylori B128] gi|298735503|ref|YP_003728024.1| exodeoxyribonuclease III [Helicobacter pylori B8] gi|216946529|gb|EEC25131.1| hypothetical protein HPB128_199g85 [Helicobacter pylori B128] gi|298354688|emb|CBI65560.1| exodeoxyribonuclease III [Helicobacter pylori B8] Length = 250 Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats. Identities = 68/260 (26%), Positives = 114/260 (43%), Gaps = 13/260 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + + D+ C+QE+K + + FE + Sbjct: 1 MKLISWNVNGLRACMTKGFMDFFNSVDADVFCIQESKMQQEQNTFE-FNGYFDFWNCAIK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+GV +K +P+ + + ++ D + R I F + + N+Y P+ S Sbjct: 60 KGYSGVVTFTKKEPLSVSYGINIEEHDKEGRVITCEFE----SFYLVNVYTPNSQQALSR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 ++ + + LEL++P+I GD N+ D NP +A F+ E R Sbjct: 116 LSYRMSWEVE--FKKFLKALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L N GF D R + Y++W Y + K+ G RID+ + S + L A I Sbjct: 174 FSELLNAGFIDTFRYFYPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALI 233 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 G SDH PV + L Sbjct: 234 YKDILG----SDHCPVGLEL 249 >gi|289671111|ref|ZP_06492186.1| exodeoxyribonuclease III [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 266 Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats. Identities = 65/273 (23%), Positives = 111/273 (40%), Gaps = 24/273 (8%) Query: 4 VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + ++N N +R A AW + D++C+QETK ++ Y Sbjct: 1 MRIISFNANGLRSAASKGFFAWFAAQDADVLCVQETKAQEHQLAGPDFLPTGYKAWFRDA 60 Query: 62 --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GVAI S+++P E+ T L + D + R+IEA F L + + Y+P G+ Sbjct: 61 STKKGYSGVAIYSRHEPDEVRTALGWPEFDEEGRYIEARFG----NLSVVSFYIPSGS-S 115 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K ++ + L + GD+NI+ D N + ++ Sbjct: 116 GELRQGYKFQVMEWLRPILDEWLASGRQYVLCGDWNIVRTALDIKNWKSNQKNSGCLPPE 175 Query: 180 RQSFQKLQN-----------MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 R L G+ D+ R H Y++W + + N G RID+ ++ Sbjct: 176 RDWLNGLCADVPEDANAAEGRGWVDSYRVLHPQGQDYTWWSNRGAARTNNVGWRIDYQLV 235 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +P L + I + R SDH P IV Sbjct: 236 TPGLRDTLKACSIYREER----FSDHAPYIVDY 264 >gi|259047804|ref|ZP_05738205.1| exodeoxyribonuclease III [Granulicatella adiacens ATCC 49175] gi|259035481|gb|EEW36736.1| exodeoxyribonuclease III [Granulicatella adiacens ATCC 49175] Length = 254 Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats. Identities = 74/264 (28%), Positives = 125/264 (47%), Gaps = 14/264 (5%) Query: 4 VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPF-ETLQSLNYHIETC 60 + +ATWNVN IR+ ++ L ++ E+NPDI+CLQETK + + Sbjct: 1 MKLATWNVNGIRSVLNKGALQEYVLESNPDILCLQETKAQQDQVELGMEFSEYEVFFNSA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+G AI +K +P+ + + ++ D + R I A + + +Y P+ Sbjct: 61 VKKGYSGTAIFTKEKPLSVEYGIGIEEHDQEGRVITAEYE----KFYLVTVYTPNAKRDL 116 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 S + + ++LE +P+IF GD N+ + D NP +A FT E R Sbjct: 117 SRL--EYRQVWEDDFLAFIKKLEETKPVIFCGDLNVAHKEIDLANPKTNTMNAGFTKEER 174 Query: 181 QSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 F ++ N DA R + YS+W Y + ++N G RID+ ++S T+ L Sbjct: 175 AKFDQVVNNDLVDAFRYLYPDTLGAYSWWSYMGGARARNVGWRIDYFVISQPLTAFLQEV 234 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 +I + G SDH PV + +++ Sbjct: 235 KIRSDVTG----SDHCPVEMKIEL 254 >gi|59802302|ref|YP_209014.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae FA 1090] gi|194099736|ref|YP_002002871.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae NCCP11945] gi|240013129|ref|ZP_04720042.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae DGI18] gi|240015572|ref|ZP_04722112.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae FA6140] gi|240120200|ref|ZP_04733162.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae PID24-1] gi|254492721|ref|ZP_05105892.1| nuclease [Neisseria gonorrhoeae 1291] gi|59719197|gb|AAW90602.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae FA 1090] gi|193935026|gb|ACF30850.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae NCCP11945] gi|226511761|gb|EEH61106.1| nuclease [Neisseria gonorrhoeae 1291] Length = 259 Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats. Identities = 59/264 (22%), Positives = 111/264 (42%), Gaps = 13/264 (4%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ + + NVN IR+ +I + DI+C+QE K ++ + + H Sbjct: 1 MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADLSADMKNPHGMHGYWHC 60 Query: 62 --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 ++ Y+GVA+ SK +P + + ++ D + RF+ F Sbjct: 61 AEKRGYSGVAVYSKRKPDNVQIGMGIEEFDREGRFVRCDFGRLGVI-----SLYLPSGSS 115 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K ++ F ++ GD+NI Q D N + ++ F E Sbjct: 116 AEERQQVKYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEE 175 Query: 180 RQSF-QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R+ + + +G+TD R + Y++W +++K+ G RID+ M++PE + S Sbjct: 176 REWIGKVIHTLGWTDMWRTLYPDVPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVS 235 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 A + K SDH P++V D Sbjct: 236 AHVYKD----EKFSDHAPLVVEYD 255 >gi|188585577|ref|YP_001917122.1| exodeoxyribonuclease III [Natranaerobius thermophilus JW/NM-WN-LF] gi|179350264|gb|ACB84534.1| exodeoxyribonuclease III [Natranaerobius thermophilus JW/NM-WN-LF] Length = 251 Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats. Identities = 71/260 (27%), Positives = 112/260 (43%), Gaps = 13/260 (5%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + E + DI C+QETK ++ E L + + Sbjct: 1 MKLISWNVNGLRACLKKGFLEYFNEVSGDIFCVQETKLQEGQIDLE-LPGYFQYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K QP+ + + D + R I F + Sbjct: 60 KGYSGTAIFTKIQPLTVQYGIGEAKHDKEGRVITLEFCD-----YYLVNVYTPNSQRELA 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + D ++ W F + L+ E+P+I GD N+ + D NP + +A FT E R Sbjct: 115 RLDYRLQWEDAF-KNYLVNLDSEKPVIVCGDLNVAHKEIDLKNPKNNKRNAGFTEEERNK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +L N GF D R + Y++W Y + +N G RID+ + S + + L A I Sbjct: 174 LTELLNAGFIDTFRYFYPDTEGAYTWWSYITKARERNAGWRIDYFLASQKLDNWLTDAEI 233 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 G SDH PV + L Sbjct: 234 HADIMG----SDHCPVALKL 249 >gi|152979786|ref|YP_001351880.1| exodeoxyribonuclease III [Janthinobacterium sp. Marseille] gi|151279863|gb|ABR88273.1| exodeoxyribonuclease III [Janthinobacterium sp. Marseille] Length = 259 Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats. Identities = 61/267 (22%), Positives = 106/267 (39%), Gaps = 15/267 (5%) Query: 3 VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59 ++ + + N+N IR A W+ +++ D IC+QE K + + E L Y + Sbjct: 1 MLKIVSANLNGIRSAAKKGFFTWMAKHDADFICVQELKAQAPDMTPEFLTPPGYTGYFHY 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G + K P + + D + R+++ F L + ++Y P G+ Sbjct: 61 AEKKGYSGAGVYCKTVPDHVQIGFGCSEFDAEGRYVQCDFG----KLSVISVYCPSGSSS 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + FL + + GD+NI D N ++ F E Sbjct: 117 EERQLAKFRFMDV-FLPHLLELKAQGRDFVICGDWNIAHNEIDLKNFKGNRKNSGFLPEE 175 Query: 180 RQSFQKLQNM-GFTDAIRATHDT--HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 R ++ + G D R H T Y++W +++KN G RID+ + +P Sbjct: 176 RAWLSRVFDEVGLVDVYRRLHPTTTEECYTWWSNRGQAYAKNVGWRIDYQVATPALAETA 235 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263 SA I R SDH P+ + D Sbjct: 236 RSAAIYKDER----FSDHAPLTIDYDW 258 >gi|269123555|ref|YP_003306132.1| exodeoxyribonuclease III Xth [Streptobacillus moniliformis DSM 12112] gi|268314881|gb|ACZ01255.1| exodeoxyribonuclease III Xth [Streptobacillus moniliformis DSM 12112] Length = 251 Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats. Identities = 72/260 (27%), Positives = 109/260 (41%), Gaps = 13/260 (5%) Query: 5 TVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 +WNVN +RA I + E P+II LQE K + E L+ + +K Sbjct: 3 KYISWNVNGLRACIKKGFLDYFNEQKPNIIGLQEIKMSEGQLDLE-LEGYYTYYNYAEKK 61 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 Y+G AI + +PI + + ++ D + R I A F + Sbjct: 62 GYSGTAIFTDVEPISVSYGIGIEEHDKEGRVITAEFEDYYFVTVYTPNSKNELERLDYRM 121 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + R ++LE ++P+I GD N+ + D NP A FT+E R F Sbjct: 122 ------IWEDEFRSYLKKLEEKKPVIVCGDLNVAHKEIDLKNPKSNTRSAGFTIEERNKF 175 Query: 184 QKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 +L GF D R + H YS+W Y ++ N G RID+ +S L A I Sbjct: 176 TELIENGFIDTFRYFYPDKIHAYSWWSYRGNARKNNTGWRIDYFCVSSSLKDRLVDAEIH 235 Query: 243 TKPRGWTKPSDHTPVIVSLD 262 K G SDH PV++ ++ Sbjct: 236 DKVEG----SDHCPVVLYIN 251 >gi|315641336|ref|ZP_07896412.1| exodeoxyribonuclease III [Enterococcus italicus DSM 15952] gi|315482909|gb|EFU73429.1| exodeoxyribonuclease III [Enterococcus italicus DSM 15952] Length = 252 Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats. Identities = 69/258 (26%), Positives = 108/258 (41%), Gaps = 13/258 (5%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + N + + D CLQETK + + L + + Sbjct: 1 MKLISWNVNGLRAVMKKNFMDVFTQLDADFFCLQETKLQAGQIEMD-LPGYTQYWNYAVK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K + + ++ D + R I + + Y P+ Sbjct: 60 KGYSGTAIFAKEPADNVFYGIGKEEHDQEGRVITLEYP----QFYLVTCYTPNSQNELKR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 D + L+ + P+I GD N+ Q D N + +A FT E R Sbjct: 116 L--DYRMEWEDDFVAYLDELKKDRPVIVCGDLNVAHQEIDLKNWKTNQKNAGFTNEERAK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F L + G+TD R + YS+W Y ++ N G RID+ ++S + TS L SA I Sbjct: 174 FTALLDHGYTDTFRHFYPELTGAYSWWSYRFNARKNNAGWRIDYFIVSNDLTSHLTSASI 233 Query: 242 DTKPRGWTKPSDHTPVIV 259 G SDH PV + Sbjct: 234 HADILG----SDHCPVEL 247 >gi|307638182|gb|ADN80632.1| Exo deoxyribonuclease III [Helicobacter pylori 908] gi|325996778|gb|ADZ52183.1| Exodeoxyribonuclease III [Helicobacter pylori 2018] gi|325998370|gb|ADZ50578.1| Exodeoxyribonuclease III [Helicobacter pylori 2017] Length = 250 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 68/260 (26%), Positives = 115/260 (44%), Gaps = 13/260 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + + D+ C+QE+K + + FE + + Sbjct: 1 MKLISWNVNGLRACMTKGFMDFFNSVDADVFCIQESKMQQEQNTFE-FKGYFDFWNCAIK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+GV +K +P+ + + ++ D + R I F + + N+Y P+ S Sbjct: 60 KGYSGVVTFTKKEPLSVSYGIDMEEHDKEGRVITCEFE----SFYLVNVYTPNSQQALSR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + + LEL++P+I GD N+ D NP +A F+ E R+ Sbjct: 116 L--SYRMSWEMEFKKFLKVLELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERKK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L N GF D R + Y++W Y + K+ G RID+ + S + L A I Sbjct: 174 FNELLNAGFIDTFRYFYPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALI 233 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 G SDH PV + L Sbjct: 234 YKDILG----SDHCPVGLEL 249 >gi|221330655|ref|NP_001137776.1| recombination repair protein 1, isoform B [Drosophila melanogaster] gi|220901923|gb|ACL82983.1| recombination repair protein 1, isoform B [Drosophila melanogaster] Length = 706 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 69/263 (26%), Positives = 115/263 (43%), Gaps = 13/263 (4%) Query: 4 VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNV +RA + I PDI CLQETK + P E + YH Sbjct: 454 LKICSWNVAGLRAWLKKDGLQLIDLEEPDIFCLQETKCANDQLPEEVTRLPGYHPYWLCM 513 Query: 63 KSYN-GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 GVAI SK PI + + ++ D R I A + + N+Y+P+ Sbjct: 514 PGGYAGVAIYSKIMPIHVEYGIGNEEFDDVGRMITAEYE----KFYLINVYVPNSGRKLV 569 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 ++ + ++L+ +P++ GD N+ P D NP +A FT E R Sbjct: 570 NLEPR--MRWEKLFQAYVKKLDALKPVVICGDMNVSHMPIDLENPKNNTKNAGFTQEERD 627 Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 +L +GF D R + Y+FW Y A++ ++N G R+D+ ++S + Sbjct: 628 KMTELLGLGFVDTFRHLYPDRKGAYTFWTYMANARARNVGWRLDYCLVSERFVPKV---- 683 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263 ++ + R SDH P+ + +I Sbjct: 684 VEHEIRSQCLGSDHCPITIFFNI 706 >gi|17136678|ref|NP_476841.1| recombination repair protein 1, isoform A [Drosophila melanogaster] gi|150421656|sp|P27864|RRP1_DROME RecName: Full=Recombination repair protein 1; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase gi|7295875|gb|AAF51175.1| recombination repair protein 1, isoform A [Drosophila melanogaster] gi|21428628|gb|AAM49974.1| LP05366p [Drosophila melanogaster] Length = 679 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 69/263 (26%), Positives = 115/263 (43%), Gaps = 13/263 (4%) Query: 4 VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNV +RA + I PDI CLQETK + P E + YH Sbjct: 427 LKICSWNVAGLRAWLKKDGLQLIDLEEPDIFCLQETKCANDQLPEEVTRLPGYHPYWLCM 486 Query: 63 KSYN-GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 GVAI SK PI + + ++ D R I A + + N+Y+P+ Sbjct: 487 PGGYAGVAIYSKIMPIHVEYGIGNEEFDDVGRMITAEYE----KFYLINVYVPNSGRKLV 542 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 ++ + ++L+ +P++ GD N+ P D NP +A FT E R Sbjct: 543 NLEPR--MRWEKLFQAYVKKLDALKPVVICGDMNVSHMPIDLENPKNNTKNAGFTQEERD 600 Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 +L +GF D R + Y+FW Y A++ ++N G R+D+ ++S + Sbjct: 601 KMTELLGLGFVDTFRHLYPDRKGAYTFWTYMANARARNVGWRLDYCLVSERFVPKV---- 656 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263 ++ + R SDH P+ + +I Sbjct: 657 VEHEIRSQCLGSDHCPITIFFNI 679 >gi|158340|gb|AAA62769.1| recombination repair protein [Drosophila melanogaster] gi|3342457|gb|AAC27621.1| recombination repair protein 1 [Drosophila melanogaster] Length = 679 Score = 177 bits (449), Expect = 2e-42, Method: Composition-based stats. Identities = 69/263 (26%), Positives = 115/263 (43%), Gaps = 13/263 (4%) Query: 4 VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNV +RA + I PDI CLQETK + P E + YH Sbjct: 427 LKICSWNVAGLRAWLKKDGLQLIDLEEPDIFCLQETKCANDQLPEEVTRLPGYHPYWLCM 486 Query: 63 KSYN-GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 GVAI SK PI + + ++ D R I A + + N+Y+P+ Sbjct: 487 PGGYAGVAIYSKIMPIHVEYGIGNEEFDDVGRMITAEYE----KFYLINVYVPNSGRKLV 542 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 ++ + ++L+ +P++ GD N+ P D NP +A FT E R Sbjct: 543 NLEPR--MRWEKLFQAYVKKLDALKPVVICGDMNVSHMPIDLENPKNNTKNAGFTQEERD 600 Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 +L +GF D R + Y+FW Y A++ ++N G R+D+ ++S + Sbjct: 601 KMTELLGLGFVDTFRHLYPDRKGAYTFWTYMANARARNVGWRLDYCLVSERFVPKV---- 656 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263 ++ + R SDH P+ + +I Sbjct: 657 VEHEIRSQCLGSDHCPITIFFNI 679 >gi|114328666|ref|YP_745823.1| exodeoxyribonuclease III [Granulibacter bethesdensis CGDNIH1] gi|114316840|gb|ABI62900.1| exodeoxyribonuclease III [Granulibacter bethesdensis CGDNIH1] Length = 275 Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 81/276 (29%), Positives = 126/276 (45%), Gaps = 14/276 (5%) Query: 1 MSVVTV--ATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETL-----QSL 53 M+++ V ATWN+NS+R R+ L + E +PD++CLQETK D FP + + Sbjct: 1 MALMRVRVATWNINSLRLRLPLLEKVLAELDPDVLCLQETKVPDPLFPADLFPGRAAEHH 60 Query: 54 NY-HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 Y H+ G K YNGVAILS+ + P R + + + + + + N Y Sbjct: 61 GYAHVAYRGMKGYNGVAILSRIPFT-VDEAAPDWCAKGDCRHMAVSLAVPSGPVALHNFY 119 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLI---FAGDYNIIPQPHDCYNPIIW 169 +P G + K + F+ A+ + P GD NI P HD ++ Sbjct: 120 VPAGGDEPDPAINPKFAHKLAFVEEATAYFAAQSPFTRTVLVGDLNIAPLEHDVWSHKQL 179 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSW-SKNKGIRIDHIM 227 N T ++ GF DAIR + Y++W Y W + ++G R+DH+ Sbjct: 180 LNVVSHTPPETTRMRQWLETGFVDAIRHFVPSDRKHYTWWSYRNRDWRASDRGRRLDHVW 239 Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +SP+ S L + R W + SDH PV V+L + Sbjct: 240 VSPDLVSSLQGHTTLKEARDWERTSDHVPVSVTLSL 275 >gi|118594300|ref|ZP_01551647.1| Exodeoxyribonuclease III:Exodeoxyribonuclease III xth [Methylophilales bacterium HTCC2181] gi|118440078|gb|EAV46705.1| Exodeoxyribonuclease III:Exodeoxyribonuclease III xth [Methylophilales bacterium HTCC2181] Length = 259 Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 66/264 (25%), Positives = 116/264 (43%), Gaps = 15/264 (5%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60 + + T N+N IRA + W+K NPD IC+QE K ++ + + L Y Sbjct: 1 MKIITLNLNGIRAASRKGMLEWLKLENPDFICVQELKAQEADLTSDMLNPYGYMGFFSYA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GV I SK P++ V + +D + R+ E + I +LYLP G+ Sbjct: 61 VKKGYSGVGIYSKISPLQQVNNTGVPLIDDEGRYAE----FIFENFSIISLYLPSGS-SG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + + K ++ +R +++ + + GD+NI D N + ++ F E R Sbjct: 116 EERQNVKYQVLEDIMRILKKKISQTKYVAVCGDFNIAHHEIDLKNFKGNKKNSGFLPEER 175 Query: 181 QSFQKLQNMGFTDAI---RATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 L + + + H T Y++W +W N G RID+ + + + Sbjct: 176 DWLSTLFSKLQWVDVYRKISPHTTEDAYTWWSNRGQAWVNNVGWRIDYQIANQNLANKAL 235 Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261 SA + + R SDH P+I++ Sbjct: 236 SASVYKEKR----FSDHAPLIINY 255 >gi|84622132|ref|YP_449504.1| exodeoxyribonuclease III [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|84366072|dbj|BAE67230.1| exodeoxyribonuclease III [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 266 Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 62/273 (22%), Positives = 105/273 (38%), Gaps = 24/273 (8%) Query: 4 VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + ++N N +R A AW + D++C+QETK ++ Y Sbjct: 1 MRIISFNANGLRSAASKGFFAWFAAQDADVLCVQETKAQEHQLAGPDFLPTGYKAWFRDA 60 Query: 62 --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GVAI S+++P E+ T L + D + R+IEA F R + Sbjct: 61 STKKGYSGVAIYSRHEPDEVRTALGWPEFDEEGRYIEARFGN-----RSVVSFYIPSGSS 115 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K ++ + L + GD+NI+ D N + ++ Sbjct: 116 GELRQGYKFQVMQWLRPILDEWLASGRQYVLCGDWNIVRTALDIKNWKSNQKNSGCLPPE 175 Query: 180 RQSFQKLQN-----------MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 R L G+ D+ R H Y++W + + N G RID+ ++ Sbjct: 176 RDWLNGLCADVPEDANAAEGRGWVDSYRVLHPQGQDYTWWSNRGAARTNNVGWRIDYQLV 235 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +P L + I + R SDH P IV Sbjct: 236 TPGLRDTLRACSIYREER----FSDHAPYIVDY 264 >gi|312114912|ref|YP_004012508.1| exodeoxyribonuclease III Xth [Rhodomicrobium vannielii ATCC 17100] gi|311220041|gb|ADP71409.1| exodeoxyribonuclease III Xth [Rhodomicrobium vannielii ATCC 17100] Length = 268 Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 70/267 (26%), Positives = 114/267 (42%), Gaps = 8/267 (2%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCG 61 + + TWN+NS+R R +A +++E PDI+CLQE K D+ FP E + L + HI CG Sbjct: 2 TLRITTWNINSVRLRFELVARFVRETRPDILCLQEIKCRDEFFPLEGFRELGFPHIAICG 61 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 Q Y+GVA LSK + + + TL + N+Y+P G I Sbjct: 62 QPGYHGVATLSKLPLEPLPRQSFCGT-EEARHLGAKVALPSGGTLALHNIYVPAGGDIPD 120 Query: 122 TKYDDKISWIKRF---LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + + K + L + + + GD+N+ P D ++ T Sbjct: 121 PELNPKFKQKLAYLAALAKWERGWTDDANAVLVGDFNVAPLETDVWSHKQLLKVVSHTPV 180 Query: 179 VRQS--FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSL 235 ++ ++ + +YS+W Y A W + ++G R+DHI S Sbjct: 181 EVEALTKVRVDGRWVDLVRKVIPPEEKVYSWWSYRARDWAASDRGRRLDHIWGSAAMAER 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262 + + RGW PSDH PV + + Sbjct: 241 TRAVSVLKDARGWPGPSDHVPVTLDFE 267 >gi|240127208|ref|ZP_04739869.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae SK-93-1035] gi|268685568|ref|ZP_06152430.1| exodeoxyribonuclease [Neisseria gonorrhoeae SK-93-1035] gi|268625852|gb|EEZ58252.1| exodeoxyribonuclease [Neisseria gonorrhoeae SK-93-1035] Length = 259 Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 60/264 (22%), Positives = 112/264 (42%), Gaps = 13/264 (4%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ + + NVN IR+ +I + DI+C+QE K ++ + + H Sbjct: 1 MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADLSADMKNPHGMHGHWHC 60 Query: 62 --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 ++ Y+GVA+ SK +P + + ++ D + RF+ F Sbjct: 61 AEKRGYSGVAVYSKRKPDNVQIGMGIEEFDREGRFVRCDFGRLGVI-----SLYLPSGSS 115 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K ++ F ++ GD+NI Q D N + ++ F E Sbjct: 116 AEERQQVKYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEE 175 Query: 180 RQSFQKLQN-MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R+ K+ + +G+TD R + Y++W +++K+ G RID+ M++PE + S Sbjct: 176 REWIGKVMHTLGWTDMWRTLYPDVPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVS 235 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 A + K SDH P++V D Sbjct: 236 AHVYKD----EKFSDHAPLVVEYD 255 >gi|88813076|ref|ZP_01128318.1| exodeoxyribonuclease III [Nitrococcus mobilis Nb-231] gi|88789709|gb|EAR20834.1| exodeoxyribonuclease III [Nitrococcus mobilis Nb-231] Length = 267 Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 71/268 (26%), Positives = 117/268 (43%), Gaps = 15/268 (5%) Query: 1 MSVVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPF-ETLQSLNYHIE 58 MS + + T N+N IRA W PD++C+QETK + YH Sbjct: 5 MS-LKITTLNLNGIRAAARKGFFDWFARERPDVLCVQETKAQRAQLDGNALFFPEGYHAF 63 Query: 59 TCG--QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 Q+ Y+GVA+ ++ +P E+ T L ++D + R++EA F + + Sbjct: 64 FHDAEQRGYSGVALYARQEPDEVRTGLGWPEIDREGRWLEARFGKLSV-----VSFYMPS 118 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + + D K ++++ L E I GD+NI +P D N + ++ F Sbjct: 119 GTSGAQRQDFKYTFMEPLLDHLKSLCEAGREYIICGDWNIAHKPIDLKNWRSNQKNSGFL 178 Query: 177 LEVRQSFQKLQNMG-FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R +L + F DA R + Y++W + +W N G RID+ M++P Sbjct: 179 PEERAWLDRLFDEAGFVDAFRLVNLEAEQYTWWSFRGQAWDNNTGWRIDYHMITPGLRER 238 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + A I T R SDH P+ ++ D Sbjct: 239 VRGAEIYTAER----FSDHAPLTLAYDW 262 >gi|83720785|ref|YP_440709.1| exodeoxyribonuclease III [Burkholderia thailandensis E264] gi|167579381|ref|ZP_02372255.1| exodeoxyribonuclease III [Burkholderia thailandensis TXDOH] gi|167617482|ref|ZP_02386113.1| exodeoxyribonuclease III [Burkholderia thailandensis Bt4] gi|257140643|ref|ZP_05588905.1| exodeoxyribonuclease III [Burkholderia thailandensis E264] gi|83654610|gb|ABC38673.1| exodeoxyribonuclease III [Burkholderia thailandensis E264] Length = 256 Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 64/264 (24%), Positives = 110/264 (41%), Gaps = 14/264 (5%) Query: 3 VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59 ++ V T N+N IR A W+ E N D +C+QE K + P E + + + Sbjct: 1 MLRVITANLNGIRSAAKKGFFEWLGEQNADCVCVQEIKVSADDLPAEFVGPHGFRSYFHH 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G + S+ +P +++ + D + R++EA F L I ++Y+P G+ Sbjct: 61 AQKKGYSGAGLYSRREPDDVIIGYGSSEFDAEGRYVEARFG----KLSIVSVYVPSGSSG 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + L+ + +I GD NI+ + D N + ++ E Sbjct: 117 DERQQA--KYRFMDEFMPHLAELKSKREVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEE 174 Query: 180 RQSFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R KL + G+ D R Y++W +++KN G RID+ + +P Sbjct: 175 RAWLTKLFDEVGYVDVFRTLDSRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGVAGTAKG 234 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 I K SDH P+ V D Sbjct: 235 TSIFRDI----KFSDHAPLTVDYD 254 >gi|325129291|gb|EGC52129.1| exodeoxyribonuclease III [Neisseria meningitidis OX99.30304] gi|325135311|gb|EGC57932.1| exodeoxyribonuclease III [Neisseria meningitidis M0579] gi|325201282|gb|ADY96736.1| exodeoxyribonuclease III [Neisseria meningitidis M01-240149] Length = 259 Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 65/264 (24%), Positives = 121/264 (45%), Gaps = 13/264 (4%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ + + NVN IR+ +I + DI+C+QE K ++ + + H Sbjct: 1 MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADLSADMKNPHGMHGYWHC 60 Query: 62 --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 ++ Y+GVA+ SK +P + + ++ D + RF+ F L + +LYLP G+ Sbjct: 61 AEKRGYSGVAVYSKRKPDNVQIGMGIEEFDREGRFVRCDFG----RLSVISLYLPSGSSA 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K ++ F ++ GD+NI Q D N + ++ F E Sbjct: 117 EERQQV-KYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEE 175 Query: 180 RQSF-QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R+ + + +G+TD R + + Y++W +++K+ G RID+ M++PE + S Sbjct: 176 REWIGKVIHTLGWTDMWRTLYPDNPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVS 235 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 A + K SDH P++V D Sbjct: 236 AHVYKD----EKFSDHAPLVVEYD 255 >gi|298370237|ref|ZP_06981553.1| exodeoxyribonuclease III [Neisseria sp. oral taxon 014 str. F0314] gi|298281697|gb|EFI23186.1| exodeoxyribonuclease III [Neisseria sp. oral taxon 014 str. F0314] Length = 258 Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 59/264 (22%), Positives = 115/264 (43%), Gaps = 13/264 (4%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ + + NVN IR+ +I + DI+C+QE K ++ + + H Sbjct: 1 MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADLSADMKNPHGMHGHWHC 60 Query: 62 --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 ++ Y+GVA+ SK P + + ++ D + RF+ F + Sbjct: 61 AEKRGYSGVAVYSKRAPDNVQIGMGIEEFDREGRFVRCDFGKLSVI-----SLYLPSGTS 115 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + + K ++ F ++ GD+NI Q D N + ++ F E Sbjct: 116 APERQELKYRFLDAFYPMLEAMKAEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEE 175 Query: 180 RQSF-QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R+ + ++++G+TD R + + Y++W +++K+ G RID+ M++PE + S Sbjct: 176 REWIGRVIRDLGWTDMWRTLYPDNPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVS 235 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 A + K SDH P++V D Sbjct: 236 AHVYKD----EKFSDHAPLVVEYD 255 >gi|187933475|ref|YP_001885926.1| exodeoxyribonuclease III [Clostridium botulinum B str. Eklund 17B] gi|187721628|gb|ACD22849.1| exodeoxyribonuclease III [Clostridium botulinum B str. Eklund 17B] Length = 251 Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 72/257 (28%), Positives = 119/257 (46%), Gaps = 13/257 (5%) Query: 5 TVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +WNVN +RA + +KE+N DI C+QE+K ++ L+ + +K Sbjct: 3 KLISWNVNGLRACVKKGFIDILKESNADIFCVQESKLQEGQIDLN-LEGYYDYWNYAEKK 61 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 Y+G A+ SK +P+ I + ++ D + R + F + N+Y P+ + Sbjct: 62 GYSGTAVFSKEKPLNISLGIGIEEHDKEGRVLTLEFE----EFYLVNVYTPNSQQKLARI 117 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 D + R L +P+I GD N+ + D NP N+A F+ E R+ F Sbjct: 118 --DYRMAWENDFRSYLNELNKAKPVIVCGDLNVAHKEIDLKNPKNNRNNAGFSDEEREKF 175 Query: 184 QKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 +L GF D R + YS+W Y ++ + N G RID+ ++S + L A+I Sbjct: 176 GELLKSGFIDTYRYFYPDKEGAYSWWSYRFNARANNAGWRIDYFLVSKDFEDRLVDAKIH 235 Query: 243 TKPRGWTKPSDHTPVIV 259 T+ G SDH PV + Sbjct: 236 TQIEG----SDHCPVEL 248 >gi|222150120|ref|YP_002551077.1| exodeoxyribonuclease III [Agrobacterium vitis S4] gi|221737102|gb|ACM38065.1| exodeoxyribonuclease III [Agrobacterium vitis S4] Length = 267 Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 78/265 (29%), Positives = 115/265 (43%), Gaps = 9/265 (3%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64 + TWN+NS+R R+ + ++K PDI+CLQE K ++ FP E Q+L Y + GQK Sbjct: 5 LTTWNINSVRLRMPIVEHFLKLRQPDILCLQEIKCQNHEFPLEAFQALGYPYAILHGQKG 64 Query: 65 YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124 Y+GVA +SK+ E D + + N + +R+ N Y+P G + Sbjct: 65 YHGVATVSKFPLTEDHRQDFCGVGDSRHISAIFEW--NGRRIRLHNFYVPAGGDEPNRDI 122 Query: 125 DDKISWIKRFLRFAS---QRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + K F+ E I GD NI P HD ++ T Sbjct: 123 NPKFGHKLDFVEEMKALSASAEPNTSAILVGDLNIAPLEHDVWSHKQLLKIVSHTPVETA 182 Query: 182 --SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLLHS 238 + + + LY++W Y A W +KG R+DHI SP+ L + Sbjct: 183 GLLDVINRGGWVDLMRQLVDPSQKLYTWWSYRAKDWDSADKGRRLDHIWSSPDLLPSLKT 242 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263 I + RGW KPSDH PV V + Sbjct: 243 IEILREARGWEKPSDHVPVTVQFAL 267 >gi|154497021|ref|ZP_02035717.1| hypothetical protein BACCAP_01314 [Bacteroides capillosus ATCC 29799] gi|150273420|gb|EDN00548.1| hypothetical protein BACCAP_01314 [Bacteroides capillosus ATCC 29799] Length = 250 Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 65/260 (25%), Positives = 112/260 (43%), Gaps = 13/260 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + DI +QETK + + L + + + Sbjct: 1 MKLISWNVNGLRACLGKGFLESFAALDADIFSIQETKMQPGQAELD-LPGYKQYWNSAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G A+ ++ +P+ + + ++ D + R I F + N Y+P+ + Sbjct: 60 KGYSGTAVFTRLEPLNVTYGIGSEEHDREGRAITLEFE----DFYLVNCYVPNAQRELTR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 D + LR L+ +P+I+ GD N+ Q D N +A FT E R Sbjct: 116 L--DWRMEWEDALRAYLLELDSRKPVIYCGDLNVAHQEIDLKNAKSNRGNAGFTDEERAK 173 Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +L GF D+ R + YS+W Y + KN G RID+ ++S + + I Sbjct: 174 MTQLLEAGFVDSFRHLYPDKTGAYSWWSYMFHAREKNAGWRIDYFLVSKSIADKIGDSII 233 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 + G SDH PV + + Sbjct: 234 HPEIMG----SDHCPVELDI 249 >gi|13473590|ref|NP_105158.1| exodeoxyribonuclease III [Mesorhizobium loti MAFF303099] gi|14024340|dbj|BAB50944.1| exodeoxyribonuclease III [Mesorhizobium loti MAFF303099] Length = 268 Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 77/266 (28%), Positives = 116/266 (43%), Gaps = 9/266 (3%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64 +ATWN+NS+R R+ + + E PD++CLQETK D+ FP + + L Y +I GQK Sbjct: 5 IATWNINSVRLRMPIVERLLDEYAPDVLCLQETKVPDELFPEKAFRRLGYQYIAFHGQKG 64 Query: 65 YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124 Y+GVA +++ + D +R + T +T+ + N Y+P G + Sbjct: 65 YHGVATVARRPIEVVEKRRFCD--IEDSRHLSVTVRAGGKTILLHNFYVPAGGDEPDPEI 122 Query: 125 DDKISWIKRFLRFASQRLELEEPLI---FAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180 + K F+ + + GD NI P HD ++ N T E Sbjct: 123 NKKFKHKLDFVAEMNAIRAEHTEVSASVLVGDLNIAPLEHDVWSHKQLLNVVSHTPVETE 182 Query: 181 QSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHS 238 + D +R LY++W Y A W N+G R+DH+ SP Sbjct: 183 NFEAMRLAGNWVDLMRHNVPLDQKLYTWWSYRAQDWELSNRGRRLDHVWSSPNLVQDFAG 242 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIP 264 I RGW +PSDH PVI D+ Sbjct: 243 YEILRAARGWERPSDHVPVIARFDLD 268 >gi|210135690|ref|YP_002302129.1| exodeoxyribonuclease III [Helicobacter pylori P12] gi|210133658|gb|ACJ08649.1| exodeoxyribonuclease [Helicobacter pylori P12] Length = 250 Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 69/260 (26%), Positives = 115/260 (44%), Gaps = 13/260 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + + D+ C+QE+K + + FE + + Sbjct: 1 MKLISWNVNGLRACMTKGFMDFFNSVDADVFCIQESKMQQEQNTFE-FKGYFDFWNCAIK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+GV +K +P+ + + ++ D + R I F + + N+Y P+ S Sbjct: 60 KGYSGVVTFTKKEPLSVNYGINMEEHDKEGRVITCEFE----SFYLVNVYTPNSQQALSR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 ++ + + LEL++P+I GD N+ D NP +A F+ E R Sbjct: 116 LSYRMSWEVE--FKKFLKALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L N GF D R + Y++W Y + KN G RID+ + S + L A I Sbjct: 174 FSELLNAGFIDTFRYFYPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTCLKDALI 233 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 G SDH PV + L Sbjct: 234 YKDILG----SDHCPVGLEL 249 >gi|218283512|ref|ZP_03489502.1| hypothetical protein EUBIFOR_02092 [Eubacterium biforme DSM 3989] gi|218215780|gb|EEC89318.1| hypothetical protein EUBIFOR_02092 [Eubacterium biforme DSM 3989] Length = 249 Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 61/261 (23%), Positives = 115/261 (44%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN IRA + + E + D +C+QETK + T +I + + Sbjct: 1 MKLISWNVNGIRAVMKKGFTDVLDELDADFVCIQETKAHPEQIESYTDNYPYQYINSAKR 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G +L K +P+ I + + D + R I + + +Y P Sbjct: 61 KGYSGTMVLCKKKPLSIKYGINVPEFDDEGRIITLEYP----EFYLVTVYTPTSG-DGLM 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + D ++ W + F + ++P++ GD+N+ D P + A F+ E R S Sbjct: 116 RLDYRLEWDEAFGNYLKSL---DKPVMACGDFNVANNEIDVPYPDMIRGTAGFSDEERDS 172 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F++ D R + YS+W Y + N G+R+D+ ++S + + ++I Sbjct: 173 FKENLLSNLVDTYRVLNPETIQYSWWSYRGQARENNIGMRLDYWLVSNDLKDKIVDSKIL 232 Query: 243 TKPRGWTKPSDHTPVIVSLDI 263 G SDH P+++ ++I Sbjct: 233 DDIYG----SDHCPIMLDINI 249 >gi|169334284|ref|ZP_02861477.1| hypothetical protein ANASTE_00682 [Anaerofustis stercorihominis DSM 17244] gi|169259001|gb|EDS72967.1| hypothetical protein ANASTE_00682 [Anaerofustis stercorihominis DSM 17244] Length = 251 Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 66/262 (25%), Positives = 116/262 (44%), Gaps = 13/262 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + TWNVN +RA + + E + DI +QETK + + + + + + Sbjct: 1 MKLVTWNVNGLRACVNKGFMDFFNEVDSDIFSVQETKLQKGQIEMD-IPGYEEYWDYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G A SK +PI + T L + + R I A + + N+Y P+ Sbjct: 60 KGYSGTATFSKIKPISVKTGLEEEKFSKEGRVITAEYE----NFYLVNVYTPNSQNELKR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 D + + L+ +P+I GD N+ + D NP + +A FT+E R Sbjct: 116 L--DYRMEWEDYFADYLCELDKVKPVIMCGDLNVAHREIDLKNPKTNKKNAGFTIEERDK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 L GF D+ R + +Y++W Y ++ N G RID+ ++S + +I Sbjct: 174 MTSLLKRGFVDSYRYLYPDIEGVYTWWSYRFNARKNNAGWRIDYFIVSDRIKDKIKDVKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 + G SDH PV++ +++ Sbjct: 234 FSDVMG----SDHCPVLLDIEL 251 >gi|240081821|ref|ZP_04726364.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae FA19] gi|240114099|ref|ZP_04728589.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae MS11] gi|240114662|ref|ZP_04728724.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae PID18] gi|240122497|ref|ZP_04735453.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae PID332] gi|240126654|ref|ZP_04739540.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae SK-92-679] gi|260441531|ref|ZP_05795347.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae DGI2] gi|268597918|ref|ZP_06132085.1| exodeoxyribonuclease [Neisseria gonorrhoeae FA19] gi|268600168|ref|ZP_06134335.1| nuclease [Neisseria gonorrhoeae MS11] gi|268600307|ref|ZP_06134474.1| nuclease [Neisseria gonorrhoeae PID18] gi|268681088|ref|ZP_06147950.1| nuclease [Neisseria gonorrhoeae PID332] gi|268685234|ref|ZP_06152096.1| nuclease [Neisseria gonorrhoeae SK-92-679] gi|291044894|ref|ZP_06570603.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] gi|268551706|gb|EEZ46725.1| exodeoxyribonuclease [Neisseria gonorrhoeae FA19] gi|268584299|gb|EEZ48975.1| nuclease [Neisseria gonorrhoeae MS11] gi|268584438|gb|EEZ49114.1| nuclease [Neisseria gonorrhoeae PID18] gi|268621372|gb|EEZ53772.1| nuclease [Neisseria gonorrhoeae PID332] gi|268625518|gb|EEZ57918.1| nuclease [Neisseria gonorrhoeae SK-92-679] gi|291011788|gb|EFE03784.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2] Length = 259 Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 59/264 (22%), Positives = 111/264 (42%), Gaps = 13/264 (4%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ + + NVN IR+ +I + DI+C+QE K ++ + + H Sbjct: 1 MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADLSADMKNPHGMHGHWHC 60 Query: 62 --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 ++ Y+GVA+ SK +P + + ++ D + RF+ F Sbjct: 61 AEKRGYSGVAVYSKRKPDNVQIGMGIEEFDREGRFVRCDFGRLGVI-----SLYLPSGSS 115 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K ++ F ++ GD+NI Q D N + ++ F E Sbjct: 116 AEERQQVKYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEE 175 Query: 180 RQSF-QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R+ + + +G+TD R + Y++W +++K+ G RID+ M++PE + S Sbjct: 176 REWIGKVIHTLGWTDMWRTLYPDVPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVS 235 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 A + K SDH P++V D Sbjct: 236 AHVYKD----EKFSDHAPLVVEYD 255 >gi|84500676|ref|ZP_00998925.1| exodeoxyribonuclease III, putative [Oceanicola batsensis HTCC2597] gi|84391629|gb|EAQ03961.1| exodeoxyribonuclease III, putative [Oceanicola batsensis HTCC2597] Length = 262 Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 81/264 (30%), Positives = 118/264 (44%), Gaps = 10/264 (3%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQK 63 T+ATWN+NS+R R + +++E PD++CLQE K+ P E L Y H+ GQK Sbjct: 4 TLATWNINSVRLREPLVLRFLQEEAPDVLCLQECKSPVDKIPREAFSDLGYTHMIARGQK 63 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 YNGVAILSK ++ + + I N Y+P G + Sbjct: 64 GYNGVAILSKMPIEDVGDRDFAALGHARHIAGRLENG-----VTIHNFYVPAGGDKPDRE 118 Query: 124 YDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180 + K +L E P GD NI P+ D +N T EV Sbjct: 119 VNVKFGQKLDYLTGMRDWFHAERPEKAVLVGDLNIAPREDDVWNHKQLLRIVSHTPIEVE 178 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHSA 239 Q + D R +LYS+W Y + W +KG R+DH+ +P+ + HS+ Sbjct: 179 HLGQTQDAGKWVDITRKDIPQGNLYSWWSYRSPDWDAADKGRRLDHVWATPDIANAGHSS 238 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 RI RG+ +PSDH PV+ + D+ Sbjct: 239 RILRHIRGYEQPSDHAPVLATFDL 262 >gi|188578884|ref|YP_001915813.1| exodeoxyribonuclease III [Xanthomonas oryzae pv. oryzae PXO99A] gi|188523336|gb|ACD61281.1| exodeoxyribonuclease III [Xanthomonas oryzae pv. oryzae PXO99A] Length = 266 Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 62/273 (22%), Positives = 105/273 (38%), Gaps = 24/273 (8%) Query: 4 VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + ++N N +R A AW + D++C+QETK ++ Y Sbjct: 1 MRIISFNANGLRSAASKGFFAWFAAQDADVLCVQETKAQEHQLAGPDFLPTGYKAWFRDA 60 Query: 62 --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GVAI S+++P E+ T L + D + R+IEA F R + Sbjct: 61 STKKGYSGVAIYSRHEPDEVRTALGWPEFDEEGRYIEARFGN-----RSVVSFYIPSGSS 115 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K ++ + L + GD+NI+ D N + ++ Sbjct: 116 GELRQGYKFQVMQWLRPILDEWLASGRQYVLCGDWNIVRTALDIKNWKSNQKNSGCLPPE 175 Query: 180 RQSFQKLQN-----------MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 R L G+ D+ R H Y++W + + N G RID+ ++ Sbjct: 176 RDWLNGLCADVPDDANAAEGRGWVDSYRVLHPQGQDYTWWSNRGAARTNNVGWRIDYQLV 235 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +P L + I + R SDH P IV Sbjct: 236 TPGLRDTLRACSIYREER----FSDHAPYIVDY 264 >gi|154688190|ref|YP_001423351.1| ExoA [Bacillus amyloliquefaciens FZB42] gi|154354041|gb|ABS76120.1| ExoA [Bacillus amyloliquefaciens FZB42] Length = 252 Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 71/263 (26%), Positives = 125/263 (47%), Gaps = 14/263 (5%) Query: 4 VTVATWNVNSIRARIHNLA--AWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + +WNVN +RA + + +++E DI+CLQETK +D + + + + Sbjct: 1 MKLISWNVNGLRAVMKKIDINTYVQETAADILCLQETKVQDGQVSLQP-EGYHAYWNYAV 59 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G A+ SK +P+ ++ L DD D + R I F + + Sbjct: 60 KKGYSGTAVFSKEKPLHVLYGLGIDDHDQEGRVITLEFE---HVFVVNCYTPNAKRGLER 116 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 Y + + Q+L+ ++P+I GD N+ + D NP +A F+ + R+ Sbjct: 117 IDYR---LQWEADFKDYLQKLDRKKPVILCGDLNVAHREIDLKNPKANRKNAGFSEQERE 173 Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 +F L N GFTD+ R + YS+W Y ++ KN G R+D++++S + A Sbjct: 174 AFSALLNAGFTDSFRYLYPDQEGAYSWWSYRTNAREKNIGWRLDYVIVSDRLKQRISQAA 233 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263 I G SDH PV +++D+ Sbjct: 234 ICADIMG----SDHCPVEMTVDL 252 >gi|89097572|ref|ZP_01170461.1| Exodeoxyribonuclease III [Bacillus sp. NRRL B-14911] gi|89087868|gb|EAR66980.1| Exodeoxyribonuclease III [Bacillus sp. NRRL B-14911] Length = 251 Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 63/262 (24%), Positives = 119/262 (45%), Gaps = 13/262 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN IRA + + E N DI C+QE+K ++ L + + + Sbjct: 1 MKLVSWNVNGIRACVKKGFLDFFMEENADIFCIQESKLQEGQIELN-LDGYHQYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G A+ +K +P+ + + G + + + R + F + N+Y P+ + Sbjct: 60 KGYSGTAVFTKEKPLYVSYGIAGRETEPEGRSLTLEFE----NFYLLNVYTPN-SKRDLA 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + ++ W + + LE ++P+I GD N+ D N ++ FT E R Sbjct: 115 RLPYRLEWEDEIREYILE-LEQKKPVILCGDLNVAHLDIDLKNARSNRGNSGFTDEERGK 173 Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 L + GF D+ R + Y++W Y A +N G RID+ ++S + + ++I Sbjct: 174 MTSLLSEGFVDSFRYLYPEQEGAYTWWSYMAKVRERNIGWRIDYFIVSDKLKEHILDSKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 G SDH P+++ + + Sbjct: 234 YCDIMG----SDHCPIMLEMAL 251 >gi|225024988|ref|ZP_03714180.1| hypothetical protein EIKCOROL_01877 [Eikenella corrodens ATCC 23834] gi|224942218|gb|EEG23427.1| hypothetical protein EIKCOROL_01877 [Eikenella corrodens ATCC 23834] Length = 257 Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 64/265 (24%), Positives = 117/265 (44%), Gaps = 13/265 (4%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETC 60 + + + NVN IR+ ++ + DI+C+QE K ++ + H Sbjct: 1 MRIISANVNGIRSAYKKGFYEYLAASGADIVCIQELKAQEADLDDSMRAPHGMHGVWHCA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 ++ Y+GVA+ SK +P + T + + D + RF++ F L + +LYLP G+ Sbjct: 61 EKRGYSGVALYSKREPDRVQTGMGIAEFDAEGRFVQVDFG----NLSVISLYLPSGSSSE 116 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K ++ F + ++ GD+NI Q D N ++ F E R Sbjct: 117 ERQQL-KFRFLAAFYPMLRELKTQGRDIVICGDWNIAHQNIDLKNWKGNLKNSGFLPEER 175 Query: 181 QSF-QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + + + +G+ D R + Y++W +++K+ G RID+ M +P SA Sbjct: 176 EWIGKVIVELGWVDIWRTLYPEMPGYTWWSQRGQAYAKDVGWRIDYQMATPALAERARSA 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIP 264 + + K SDH P++V D P Sbjct: 236 HVYKQ----EKFSDHAPLVVDYDYP 256 >gi|268679182|ref|YP_003303613.1| exodeoxyribonuclease III [Sulfurospirillum deleyianum DSM 6946] gi|268617213|gb|ACZ11578.1| exodeoxyribonuclease III [Sulfurospirillum deleyianum DSM 6946] Length = 254 Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 62/262 (23%), Positives = 94/262 (35%), Gaps = 10/262 (3%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN IRA N +W+ E PD++CLQE K E P H TC Sbjct: 1 MKLISWNVNGIRAVANKNAFSWVDEEKPDVLCLQEIKAEAHQIPEPLFT----HPFTCKH 56 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 + S + E + + + Sbjct: 57 INSATKKGYSGTMSFSTRLFDTTNTAWHIDHTKEGRILEHHFGDVVLFNVYFPNGQQSEE 116 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + K+ + FL + + +I GD N + D NP E+ + F R Sbjct: 117 RLRHKMQFYSDFLAHTEALRTMGKGIIICGDVNTAHREIDLANPKANEDISGFLPIERAW 176 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 L G+ D R H YS+W Y + + +N G RID+ +S E L A I Sbjct: 177 IDTLLAKGYLDTFREVHGNVKDAYSWWSYRSGARERNVGWRIDYFFISKELQKNLKDAFI 236 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 +G SDH PV + + + Sbjct: 237 LPHIQG----SDHCPVGIEITL 254 >gi|57505734|ref|ZP_00371660.1| exodeoxyribonuclease III [Campylobacter upsaliensis RM3195] gi|57016007|gb|EAL52795.1| exodeoxyribonuclease III [Campylobacter upsaliensis RM3195] Length = 252 Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 63/262 (24%), Positives = 99/262 (37%), Gaps = 12/262 (4%) Query: 4 VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WN+N +RA W++E D I QE K + FP + + H+ Sbjct: 1 MKLLSWNINGLRAICDKGGLEWLREEKIDFIGFQEIKASEDKFPKKIYEFPFKHMYFNSA 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K ++S D D I + N Sbjct: 61 KRAGYSGVMSLCNFESETKKCEFFDDDEGRVLEHNFNNIVLFNIYFPN------GQKDEE 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + K+ + FL + ++ L+ + +I GD N + D +P N + F R Sbjct: 115 RLNHKMKFYADFLAYLNKLLKEGKEVIICGDVNTAHKEIDLTHPKANANTSGFLPIERAW 174 Query: 183 FQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 L +GF D R + D YS+W Y + +N G RID+ +S S L +A I Sbjct: 175 IDDLLALGFIDTFREINGDIKEKYSWWSYRMKARERNVGWRIDYFFISKGLKSKLKNAFI 234 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 G SDH PV + LDI Sbjct: 235 KNDIFG----SDHAPVGIELDI 252 >gi|212213194|ref|YP_002304130.1| exodeoxyribonuclease III [Coxiella burnetii CbuG_Q212] gi|212011604|gb|ACJ18985.1| exodeoxyribonuclease III [Coxiella burnetii CbuG_Q212] Length = 259 Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats. Identities = 63/263 (23%), Positives = 109/263 (41%), Gaps = 13/263 (4%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + T N+N IRA W+K DI+CLQETK + + YH Sbjct: 1 MRIITLNLNGIRAAARRGFFDWLKRQKADIVCLQETKACLEITNGDQFHPKGYHCYYHDA 60 Query: 63 KS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + Y+GV I + +P + T L + D + R+I+A F + Sbjct: 61 EKSGYSGVGIYCREKPDRVTTRLGWEHADKEGRYIQADFGSLSV-----ASLYMPSGTTG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K ++ R+++ + + I GD+NI+ + D N + + E R Sbjct: 116 EHRQKIKFDFMDRYMKRLKNIVHSKRSFIICGDWNIVHKDIDIKNFKSNQKHSGCLPEER 175 Query: 181 QS-FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + +G DA R + Y++W +W KN G RID+ +++ + + + S Sbjct: 176 AWLDEVFTKVGLVDAFRVVNQKPDQYTWWSSRGRAWEKNVGWRIDYQVITSDLKNSVKSE 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 RI R SDH P+I+ + Sbjct: 236 RIYKDKR----FSDHAPLIIDYE 254 >gi|967268|gb|AAC47024.1| class II apurinic/apyrimidinic(AP)-endonuclease [Dictyostelium discoideum] Length = 361 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 69/263 (26%), Positives = 115/263 (43%), Gaps = 10/263 (3%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFE-TLQSLNYHIETCG 61 + + +WNV ++ + +++ NPD++CLQETK N + + YH Sbjct: 105 MKIISWNVAGFKSVLSKGFTECVEKENPDVLCLQETKINPSNIKKDQMPKGYEYHFIEAD 164 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 QK ++G +L+K +P I + D + R I + I N Y+P+ Sbjct: 165 QKGHHGTGVLTKKKPNAITFGIGIAKHDNEGRVITLEYV----QFYIVNTYIPNAGTRGL 220 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + D +I + ++L +P+I+ GD N+ D NP + A FT+E R Sbjct: 221 QRLDYRIKEWDVDFQAYLEKLNATKPIIWCGDLNVAHTEIDLKNPKTNKKSAGFTIEERT 280 Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 SF G+ D+ R + Y+FW Y SKN G R+D+ ++S + Sbjct: 281 SFSNFLEKGYVDSYRHFNPGKEGSYTFWSYLGGGRSKNVGWRLDYFVVSKRLMDSIK--- 337 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263 I R SDH P+ V +D+ Sbjct: 338 ISPFHRTSVMGSDHCPIGVVVDL 360 >gi|313667587|ref|YP_004047871.1| nuclease [Neisseria lactamica ST-640] gi|313005049|emb|CBN86481.1| putative nuclease [Neisseria lactamica 020-06] Length = 259 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 65/264 (24%), Positives = 120/264 (45%), Gaps = 13/264 (4%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ + + NVN IR+ +I + DI+C+QE K ++ + E H Sbjct: 1 MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADLSEEMKNPHGMHGYWHC 60 Query: 62 --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 ++ Y+GVA+ K +P + + ++ D + RF+ F L + +LYLP G+ Sbjct: 61 AEKRGYSGVAVYGKRKPDNVQIGMGIEEFDREGRFVRCDFG----RLSVISLYLPSGSSA 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K ++ F ++ GD+NI Q D N + ++ F E Sbjct: 117 EERQQV-KYRFLDAFYPMLETMKNEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEE 175 Query: 180 RQSF-QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R+ + + +G+TD R + + Y++W +++K+ G RID+ M++PE + S Sbjct: 176 REWIGKVIHTLGWTDMWRTLYPDNPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVS 235 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 A + K SDH P++V D Sbjct: 236 AHVYKD----EKFSDHAPLVVEYD 255 >gi|241759074|ref|ZP_04757185.1| exodeoxyribonuclease III [Neisseria flavescens SK114] gi|319639647|ref|ZP_07994394.1| exodeoxyribonuclease [Neisseria mucosa C102] gi|241320676|gb|EER56929.1| exodeoxyribonuclease III [Neisseria flavescens SK114] gi|317399218|gb|EFV79892.1| exodeoxyribonuclease [Neisseria mucosa C102] Length = 259 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 65/264 (24%), Positives = 120/264 (45%), Gaps = 13/264 (4%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ + + NVN IR+ +I + DI+C+QE K ++ + + H Sbjct: 1 MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADLSDDMKNPHGMHGYWHC 60 Query: 62 --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 ++ Y+GVA+ SK +P + + ++ D + RF+ F L + +LYLP G+ Sbjct: 61 AEKRGYSGVAVYSKRKPDNVQIGMGIEEFDREGRFVRCDFG----KLSVISLYLPSGSSA 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K ++ F ++ GD+NI Q D N + ++ F E Sbjct: 117 EERQQV-KYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEE 175 Query: 180 RQSF-QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R+ + + +G+TD R + Y++W +++K+ G RID+ M++PE + S Sbjct: 176 REWIGKVIHKLGWTDMWRTLYPDVPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVS 235 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 A + K SDH P++V D Sbjct: 236 AHVYKD----EKFSDHAPLVVEYD 255 >gi|161831527|ref|YP_001596246.1| exodeoxyribonuclease III [Coxiella burnetii RSA 331] gi|161763394|gb|ABX79036.1| exodeoxyribonuclease III [Coxiella burnetii RSA 331] Length = 259 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 63/263 (23%), Positives = 109/263 (41%), Gaps = 13/263 (4%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + T N+N IRA W+K DI+CLQETK + + YH Sbjct: 1 MRIITLNLNGIRAAARRGFFDWLKRQKADIVCLQETKACLEITNGDQFHPKGYHCYYHDA 60 Query: 63 KS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + Y+GV I + +P + T L + D + R+I+A F + Sbjct: 61 EKSGYSGVGIYCREKPDRVTTRLGWEHADKEGRYIQADFGSLSV-----ASLYMPSGTTG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K ++ R+++ + + I GD+NI+ + D N + + E R Sbjct: 116 EHRQKIKFDFMDRYMKRLKNIVHSKRSFIICGDWNIVHKEIDIKNFKSNQKHSGCLPEER 175 Query: 181 QS-FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + +G DA R + Y++W +W KN G RID+ +++ + + + S Sbjct: 176 AWLDEVFTKVGLVDAFRVVNQKPDQYTWWSSRGRAWEKNVGWRIDYQVITSDLKNSVKSE 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 RI R SDH P+I+ + Sbjct: 236 RIYKDKR----FSDHAPLIIDYE 254 >gi|224371156|ref|YP_002605320.1| ExoA [Desulfobacterium autotrophicum HRM2] gi|223693873|gb|ACN17156.1| ExoA [Desulfobacterium autotrophicum HRM2] Length = 262 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 63/266 (23%), Positives = 111/266 (41%), Gaps = 15/266 (5%) Query: 4 VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + +WNVN +RA + +++ + D++ LQETK + E L Y Sbjct: 6 LRLVSWNVNGLRAAVKKDFLKSMEQLDADVLMLQETKLSEDQRTDEMLLVDGYDSHWAYS 65 Query: 62 --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GVA ++ P+ + + + D + R +E F + N+Y P+G Sbjct: 66 SVKKGYSGVAAYTRPVPLAVAPGIGIERFDNEGRILELDFE----DFILFNVYFPNGQMS 121 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K+ + + F A + + L+ GD+N D NP + F Sbjct: 122 DER-LQYKMDFYEAFFAHADRLRKKGRSLVITGDFNTAHNEIDLKNPKPNSKRSGFLPVE 180 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL--LH 237 R+ +L G+ D R + YS+W Y ++ + N G RID+ ++ + + Sbjct: 181 REVLDRLVERGYVDTFRHFNPDTVKYSWWSYRFNARANNAGWRIDYFFVTQDIIDKGWVT 240 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263 ID G SDH PV + L + Sbjct: 241 RTFIDNDILG----SDHCPVGIELTL 262 >gi|254476066|ref|ZP_05089452.1| exodeoxyribonuclease III [Ruegeria sp. R11] gi|214030309|gb|EEB71144.1| exodeoxyribonuclease III [Ruegeria sp. R11] Length = 262 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 82/264 (31%), Positives = 121/264 (45%), Gaps = 10/264 (3%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQK 63 T+ATWN+NS+R R + ++E PD++CLQE K+ P E +L Y H+ GQK Sbjct: 4 TLATWNINSVRLREPIVVKLLEEEGPDVLCLQECKSPVDKIPMEQFAALGYRHMIARGQK 63 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 YNGVAILS+ ++ GD + I N Y+P G + + Sbjct: 64 GYNGVAILSRLPIEDV-----GDKDFAGLGHARHVAGRLENGVTIHNFYVPAGGDVPDRE 118 Query: 124 YDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180 ++K +L + P GD NI P+ D ++ T EV Sbjct: 119 VNEKFGQKLDYLTDMRDWFHADRPEKSVLVGDLNIAPREDDVWDHKKLLKVVSHTPVEVE 178 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHSA 239 ++ G++D R LYS+W Y A W +KG R+DH+ + + S HS+ Sbjct: 179 HFTDVMEAGGWSDVTRNDIPDGRLYSWWSYRAKDWDAADKGRRLDHVWATSDIKSSAHSS 238 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 R+ RGW KPSDH PV + D+ Sbjct: 239 RVLRDARGWEKPSDHAPVFATFDL 262 >gi|254388845|ref|ZP_05004077.1| exodeoxyribonuclease [Streptomyces clavuligerus ATCC 27064] gi|294813139|ref|ZP_06771782.1| Putative exodeoxyribonuclease [Streptomyces clavuligerus ATCC 27064] gi|326441562|ref|ZP_08216296.1| exodeoxyribonuclease III [Streptomyces clavuligerus ATCC 27064] gi|197702564|gb|EDY48376.1| exodeoxyribonuclease [Streptomyces clavuligerus ATCC 27064] gi|294325738|gb|EFG07381.1| Putative exodeoxyribonuclease [Streptomyces clavuligerus ATCC 27064] Length = 283 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 54/284 (19%), Positives = 97/284 (34%), Gaps = 24/284 (8%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++TV + NVN +RA W+ D+ICLQE + E + P + + Sbjct: 1 MLTVTSVNVNGLRAAAKKGFVEWLAGAAADVICLQEVRAEPEQLPEGVRRPEGWFTAHAP 60 Query: 62 Q--KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 K GV++ ++ +P E+ + R+IEA T + G Sbjct: 61 AGAKGRAGVSLYTRREPDEVRVGFGVPEFAHSGRYIEADLPGVTVA-SLYLPSGEVGTER 119 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 KY +++ ++ ++ GD+NI D N + +A F E Sbjct: 120 QDEKYRFMDAFLPYLSELRARSAAAGREVVVCGDWNIAHHEADLKNWRGNKKNAGFLPEE 179 Query: 180 RQSFQKL--------------------QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK 219 R ++ D Y++W Y ++ + Sbjct: 180 RAWLSRVLDGGDGGEGDQGGEGGDSAGYAGYVDVVRALHPDQEGPYTWWSYRGRAFDNDS 239 Query: 220 GIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 G RID +P + ++ + SDH PV V ++ Sbjct: 240 GWRIDLQAATPSLAARAVKGYVERAATHEERWSDHAPVTVVYEL 283 >gi|83855258|ref|ZP_00948788.1| exodeoxyribonuclease III, putative [Sulfitobacter sp. NAS-14.1] gi|83843101|gb|EAP82268.1| exodeoxyribonuclease III, putative [Sulfitobacter sp. NAS-14.1] Length = 262 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 80/264 (30%), Positives = 119/264 (45%), Gaps = 10/264 (3%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQK 63 T+ATWN+NS+R R + + E+ PD++CLQE K+ P Y H+ GQK Sbjct: 4 TLATWNINSVRLREPIVLKLLAEHGPDVLCLQECKSPVDKIPTAAFIEAGYTHMVARGQK 63 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 YNGVAILS+ + GD + + N Y+P G + + Sbjct: 64 GYNGVAILSRLPLV-----DAGDQDFATLGHARHVAAKLENGVTVHNFYVPAGGDVPDRE 118 Query: 124 YDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180 ++K +L ++P GD NI P+ D ++ T EV Sbjct: 119 VNEKFGQKLDYLADMRDWFHGDKPEKSILVGDLNIAPREDDVWDHKKLLKVVSHTPIEVE 178 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHSA 239 + + GF D R +LYS+W Y A W +KG R+DH+ +P+ + HS+ Sbjct: 179 KLAETQDAGGFVDVTRQDIPQGNLYSWWSYRAKDWDAADKGRRLDHVWATPDISGAAHSS 238 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 R+ RGW KPSDH PV + D+ Sbjct: 239 RVLRDARGWEKPSDHAPVFATFDL 262 >gi|296445860|ref|ZP_06887812.1| exodeoxyribonuclease III Xth [Methylosinus trichosporium OB3b] gi|296256688|gb|EFH03763.1| exodeoxyribonuclease III Xth [Methylosinus trichosporium OB3b] Length = 266 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 72/268 (26%), Positives = 126/268 (47%), Gaps = 10/268 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62 + + TWN+NS+R RI + ++K++ PD++CLQETK + FP+ +++ Y H GQ Sbjct: 1 MKITTWNINSVRLRIPLVVDFLKQHAPDVLCLQETKCRNAEFPYADFRAIGYEHFAINGQ 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT-- 120 K Y+GVAI+SK+ + + AR + + I N Y+P G Sbjct: 61 KGYHGVAIVSKHPLELL--DIRDFCETGDARHVSVGLPNGGTPITIHNFYVPAGGDEPDV 118 Query: 121 --STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + K+ K+ ++ + ++ + ++ GD NI P D ++ T Sbjct: 119 TINPKFAHKLGFLDEMKEWVTRERITDGRVVLVGDLNIAPLEQDVWSHKALLQTVSHTPV 178 Query: 179 VRQSFQKLQNMGFTDAIR--ATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSL 235 Q + + G + LY++W Y A W+K ++G R+DH+ S ++ Sbjct: 179 EVQKLGAVFDAGRWIDAMRRFVPEQEKLYTWWSYRASDWTKSDRGRRLDHVWTSQALSTE 238 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 L + + R W +PSDH PV V+L + Sbjct: 239 LLEMNVLREARSWQRPSDHVPVTVALAV 266 >gi|254460243|ref|ZP_05073659.1| exodeoxyribonuclease III [Rhodobacterales bacterium HTCC2083] gi|206676832|gb|EDZ41319.1| exodeoxyribonuclease III [Rhodobacteraceae bacterium HTCC2083] Length = 262 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 82/268 (30%), Positives = 120/268 (44%), Gaps = 11/268 (4%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIET 59 MS T+ATWN+NS+R R + ++E PD++CLQE K+ + P E +L Y H+ Sbjct: 1 MS-FTLATWNINSVRLREPIVCKLLQEEAPDVLCLQECKSPVELIPTEAFAALGYTHMVA 59 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 GQK YNGVAILSK E+ + + + + P G + Sbjct: 60 RGQKGYNGVAILSKLPIKEVGAEDFAQLGHARHIAGQLENGVIVHNFYV-----PAGGDV 114 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL 177 + ++K +L + P GD NI P+ D ++ T Sbjct: 115 PDREKNEKFGQKLDYLTEMRDWFKTNSPRKSILVGDLNIAPREDDVWDHKKLLKIVSHTP 174 Query: 178 -EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSL 235 EV ++ + D RA LYS+W Y A W NKG R+DH+ + + S Sbjct: 175 IEVEHLDDVMKAGDWHDVTRADISEGKLYSWWSYRAKDWDAANKGRRLDHVWATGDIASA 234 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 HS+R+ RGW KPSDH PV + D+ Sbjct: 235 AHSSRVLRDARGWEKPSDHAPVFATFDL 262 >gi|157127237|ref|XP_001654881.1| ap endonuclease [Aedes aegypti] gi|108872984|gb|EAT37209.1| ap endonuclease [Aedes aegypti] Length = 612 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 67/262 (25%), Positives = 112/262 (42%), Gaps = 13/262 (4%) Query: 5 TVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 +++WNV +R+ + + + PDI+C+QETK D P E YH + Sbjct: 361 KISSWNVAGLRSWVGKGGLDFFEHEKPDILCIQETKCVDDQLPEEVRHIKGYHPYWLCKP 420 Query: 64 SYN-GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 GVAI SK P + L ++ D R + A + + + G + + Sbjct: 421 GGYAGVAIYSKKMPFNVTYGLGDEEQDADGRLLTAEYE---KFFLVCVYVPNAGRGLVTL 477 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K + L+ ++P+I GD N+ + D NP + +A FT E R+ Sbjct: 478 P---KRMRWDEKFHKYLKDLDAKKPVILCGDMNVAHEEIDLANPKTNKKNAGFTPEEREG 534 Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 KL ++GF D R + Y+FW Y ++ +KN G R+D+ + S + + Sbjct: 535 MTKLLSLGFVDTFRQLYPEQSGAYTFWTYMGNARAKNVGWRLDYFITSERFVGKV----V 590 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 D R SDH P+ + L + Sbjct: 591 DNVIRSGVYGSDHCPLTLFLKV 612 >gi|15677903|ref|NP_275071.1| exodeoxyribonuclease [Neisseria meningitidis MC58] gi|218767349|ref|YP_002341861.1| putative nuclease [Neisseria meningitidis Z2491] gi|157883966|pdb|2JC5|A Chain A, Apurinic Apyrimidinic (Ap) Endonuclease (Nape) From Neisseria Meningitidis gi|7227344|gb|AAF42400.1| exodeoxyribonuclease [Neisseria meningitidis MC58] gi|121051357|emb|CAM07648.1| putative nuclease [Neisseria meningitidis Z2491] gi|316983973|gb|EFV62952.1| exodeoxyribonuclease III [Neisseria meningitidis H44/76] gi|319409609|emb|CBY89908.1| putative exodeoxyribonuclease [Neisseria meningitidis WUE 2594] gi|325139403|gb|EGC61943.1| exodeoxyribonuclease III [Neisseria meningitidis CU385] gi|325201128|gb|ADY96583.1| exodeoxyribonuclease III [Neisseria meningitidis H44/76] gi|325208932|gb|ADZ04384.1| exodeoxyribonuclease III [Neisseria meningitidis NZ-05/33] Length = 259 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 65/264 (24%), Positives = 120/264 (45%), Gaps = 13/264 (4%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ + + NVN IR+ +I + DI+C+QE K ++ + + H Sbjct: 1 MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADLSADMKNPHGMHGHWHC 60 Query: 62 --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 ++ Y+GVA+ SK +P + + ++ D + RF+ F L + +LYLP G+ Sbjct: 61 AEKRGYSGVAVYSKRKPDNVQIGMGIEEFDREGRFVRCDFG----RLSVISLYLPSGSSA 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K ++ F ++ GD+NI Q D N + ++ F E Sbjct: 117 EERQQV-KYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEE 175 Query: 180 RQSF-QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R+ + + +G+TD R + Y++W +++K+ G RID+ M++PE + S Sbjct: 176 REWIGKVIHKLGWTDMWRTLYPDVPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVS 235 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 A + K SDH P++V D Sbjct: 236 AHVYKD----EKFSDHAPLVVEYD 255 >gi|332180233|gb|AEE15921.1| exodeoxyribonuclease III Xth [Treponema brennaborense DSM 12168] Length = 259 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 61/264 (23%), Positives = 100/264 (37%), Gaps = 18/264 (6%) Query: 5 TVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS-------LNYH 56 + +WNVN IRA W + DIIC+QETK + E + + Sbjct: 3 RIISWNVNGIRAAEKKGFLQWAAYSGADIICIQETKARPEQLSSELIAPAAADGRTYKSY 62 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 + + Y+G AI S +P + D T+ + N Sbjct: 63 WSSAKRPGYSGTAIYSLQEPDSVELMNNPAFDDEGRVLAAKYGTLAVISAYFPNSQEAGA 122 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 K+ + + L F + ++ ++ GDYNI +P D NP E +A + Sbjct: 123 R------LAYKLDFCRAMLAFCADLVKNGYDIVLCGDYNIAHKPIDLANPKANEGNAGYL 176 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 E R + GF D R Y++W Y + KN G RID+ ++ + Sbjct: 177 PEERAWMDEFTAAGFCDTFRKFCTDGQQYTWWSYRFHAREKNIGWRIDYQCVNEAFAGKV 236 Query: 237 HSARIDTKPRGWTKPSDHTPVIVS 260 ++ I +G SDH P+++ Sbjct: 237 VASAILNDVQG----SDHCPIVLE 256 >gi|258545109|ref|ZP_05705343.1| exodeoxyribonuclease III [Cardiobacterium hominis ATCC 15826] gi|258519628|gb|EEV88487.1| exodeoxyribonuclease III [Cardiobacterium hominis ATCC 15826] Length = 258 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 61/262 (23%), Positives = 107/262 (40%), Gaps = 12/262 (4%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFET--LQSLNYHIET 59 + + T+N N IRA W+ + D +C+QETK + + + H Sbjct: 1 MFKIITFNANGIRAAARKGFFQWLNAQDADAVCIQETKAQLPQLEGDATYFPFAHNHYHD 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GVA+ K+ P + + ++D + R++EA + + H Sbjct: 61 AEKKGYSGVALYLKHPPQAVQHGIGWAEIDSEGRYLEARYPGFSLI-----SLYMHSGTS 115 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K +++ + + + R E LI GD NI D N ++ F + Sbjct: 116 GEERQAKKEAFMAKLAPWLNARAAAGERLILCGDINIAHTEKDLKNWKGNLKNSGFLPQE 175 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R L F DA R H Y++W ++ + N G RID+ ++S + SA Sbjct: 176 RAWLTDLFAGEFRDAFRLVHPDAEQYTWWSQRGNARANNVGWRIDYHIISQNLAGQVESA 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261 + T SDH P+I++ Sbjct: 236 SVYTD----ENFSDHAPLILTY 253 >gi|172041403|ref|YP_001801117.1| exodeoxyribonuclease III [Corynebacterium urealyticum DSM 7109] gi|171852707|emb|CAQ05683.1| exodeoxyribonuclease III [Corynebacterium urealyticum DSM 7109] Length = 271 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 78/267 (29%), Positives = 120/267 (44%), Gaps = 14/267 (5%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 +S + +ATWN+NS+R R + A+++ ++ D++CLQETK DK FP Y Sbjct: 11 LSSMRIATWNINSVRTREDRVRAFLERSDVDVLCLQETKCTDKQFP--DFSDTGYEQAHH 68 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQ----ARFIEATFTINTQTLRIGNLYLPHG 116 G S+NGVAILS+ ++ T D +R+ +LY+P+G Sbjct: 69 GLHSFNGVAILSRVGLEDVQTEFGQPGFDKDLNAVQHQEARAIGALCNGVRVWSLYVPNG 128 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDAC 174 I Y K++W+ +A E GD+NI P+ D ++ +E Sbjct: 129 REIRDPHYSYKLAWLDALASYAKTTGEDGTAEKLVLTGDFNIAPRDEDVWDRSWFEGKTH 188 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 T R+ L++ G T A Y++WDY A + KN+GIRID + Sbjct: 189 VTPNERKRLTALEDAGLTQATELI---ADQYTYWDYQAMRFQKNEGIRIDLQYA-RGLSP 244 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261 + R+D R SDH PVI+ Sbjct: 245 --EAGRVDRDERKGKGASDHAPVIIDY 269 >gi|224372849|ref|YP_002607221.1| exodeoxyribonuclease III [Nautilia profundicola AmH] gi|223588651|gb|ACM92387.1| exodeoxyribonuclease III [Nautilia profundicola AmH] Length = 250 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 79/260 (30%), Positives = 128/260 (49%), Gaps = 12/260 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + T+NVNSIR+R+ + IKE + D++C+QE K E+ FP Y GQK Sbjct: 1 MRICTFNVNSIRSRLEIVQNLIKEYDIDVLCMQEIKVEEDKFPK---IDEEYECVIHGQK 57 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 NGVA+ S+ + G+ + + + + I N+Y+P G+ Sbjct: 58 KLNGVAVCSRIPIEKYQKGFEGELEEARFIYSLIDE------IHIINVYVPLGDNYGER- 110 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 ++ KI + + F S+ ++ ++ GD N+ D ++P IWE + F E + Sbjct: 111 FEYKIYFYNKLFEFLSRFDLSKDKVVLCGDMNVAYSDLDVWDPEIWEGEVTFLPEEKAMI 170 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + NMGF D IR + +Y+F+DY KN+G+R+D++ LSP + + I T Sbjct: 171 NNILNMGFVDVIREFNKNERVYTFYDYRGAKVYKNEGMRLDYVFLSPTLAKEVKNVEILT 230 Query: 244 KPRGWTK--PSDHTPVIVSL 261 R K PSDH P+IV L Sbjct: 231 SVRRKRKPTPSDHVPIIVEL 250 >gi|312890448|ref|ZP_07749985.1| exodeoxyribonuclease III Xth [Mucilaginibacter paludis DSM 18603] gi|311297218|gb|EFQ74350.1| exodeoxyribonuclease III Xth [Mucilaginibacter paludis DSM 18603] Length = 255 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 77/264 (29%), Positives = 127/264 (48%), Gaps = 13/264 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETL-QSLNY--HIET 59 + + T+NVN IR+ + N +W++ ++ D++CLQE K L + L Y + Sbjct: 1 MKIITYNVNGIRSAMSKNWLSWLQASDADVVCLQEIKATPDVLTDLLLVEQLGYEHYWYP 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G AI +K P I D D + R I F + + ++Y P G+ Sbjct: 61 AEKKGYSGTAIFTKQTPKHIEYGCGISDFDREGRNIRVDFD----DVSVMSVYFPSGS-S 115 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + D K ++ F + ++ L+ +GDYNI +P D +NP N + F Sbjct: 116 GDERQDFKFRFLDEFGEYINKLKWAYPNLVISGDYNICHRPIDIHNPKSNANSSGFLPAE 175 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R+ + L GF D R + H Y++W + A+S +KN G RID+ M + L+ A Sbjct: 176 REWMENLIESGFVDTFRYLNKEPHNYTWWSFRANSRAKNLGWRIDYNMATQPLQPLIKRA 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 I ++ R SDH PV++ LD+ Sbjct: 236 AILSEAR----HSDHCPVLLELDL 255 >gi|304407353|ref|ZP_07389006.1| exodeoxyribonuclease III Xth [Paenibacillus curdlanolyticus YK9] gi|304343794|gb|EFM09635.1| exodeoxyribonuclease III Xth [Paenibacillus curdlanolyticus YK9] Length = 255 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 63/261 (24%), Positives = 101/261 (38%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + E++ DI CLQETK + + + + Sbjct: 1 MKLISWNVNGLRACVTKGFMDYFNESDADIFCLQETKLQAGQIELPLEGRYSQYWNYAVK 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G A+ +K +P+ + + D D + N Sbjct: 61 KGYSGTAVFTKVEPLTVRYGIEEDSEDEGRILTLEFDRFYLVNVYTPNAKRDLSRLG--- 117 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + R L+ ++P+I GD N+ Q D N ++ FT E R Sbjct: 118 ----YRLEWEDRFRAYLLELDAQKPVIVCGDLNVAHQEIDLKNAKSNHGNSGFTTEERGK 173 Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 L GF D R H +S+W + +N G RID+ + S + A I Sbjct: 174 MTDLLESGFIDTFRHLHPERDDAFSWWSFMPKVRERNIGWRIDYFLASARLAPHVTDAGI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 D+ G SDH PV+V L+ Sbjct: 234 DSAILG----SDHCPVMVQLE 250 >gi|302543032|ref|ZP_07295374.1| exodeoxyribonuclease III [Streptomyces hygroscopicus ATCC 53653] gi|302460650|gb|EFL23743.1| exodeoxyribonuclease III [Streptomyces himastatinicus ATCC 53653] Length = 273 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 54/264 (20%), Positives = 95/264 (35%), Gaps = 6/264 (2%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 V++V T NVN +RA W+ D++CLQE + E + P + +H+ Sbjct: 7 VLSVTTVNVNGLRAAAKKGFVPWLDGTAADVVCLQEVRAEPRELPEAVREPDGWHVVHAP 66 Query: 62 Q--KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 K GV++ ++ + + + D R++E T + G Sbjct: 67 AAAKGRAGVSVYARRELEAVRVGFGSSEFDDSGRYVEVDLPGVTVG-SLYLPSGEVGTER 125 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K ++ + + GD+NI Q D N + F E Sbjct: 126 QDEKERFTAEFLPYLKELRERAAADGREALVCGDWNIAHQEADLKNWKANRKKSGFLPEE 185 Query: 180 RQSFQKLQNMGFTDAIRA--THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 R ++ + D YS+W Y ++ + G RID+ + +P Sbjct: 186 RAWLSRVFEEAAYVDVVRALHPDVDGPYSWWSYRGRAFDNDAGWRIDYQVATPGLAGRAL 245 Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261 A ++ P + SDH PV V+ Sbjct: 246 KAVVERAPAYDQRWSDHAPVTVTY 269 >gi|229086305|ref|ZP_04218483.1| Exodeoxyribonuclease [Bacillus cereus Rock3-44] gi|228697000|gb|EEL49807.1| Exodeoxyribonuclease [Bacillus cereus Rock3-44] Length = 252 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 64/263 (24%), Positives = 121/263 (46%), Gaps = 14/263 (5%) Query: 4 VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + +WNVN +RA +++E + DI CLQE K + + + Sbjct: 1 MKFISWNVNGLRAVIAKGGFIEYLEETDTDIFCLQEIKLQSGQVDLNP-EGYYVYWNYAV 59 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G AIL+K +P+ + L ++ D + R I F + L + G Sbjct: 60 KKGYSGTAILTKKEPLSVTYGLGIEEHDQEGRLITLEFE-DFYMLTLYTPNAKRGLERLD 118 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + + + +L+ ++P+IF GD N+ + D NP + F+ + R+ Sbjct: 119 YR-----MKWEEDILSYITKLDKKKPVIFCGDLNVAHKEIDLKNPKTNRKNPGFSDQERK 173 Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 F ++ + GF D R + YS+W Y ++ +KN G R+D+ ++S + A+ Sbjct: 174 RFTQILDEGFIDTYRYLYPDREGAYSWWSYRMNARAKNIGWRLDYFIVSERLKDKIVDAK 233 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263 I+++ G SDH PV +++++ Sbjct: 234 INSEVMG----SDHCPVELNMEL 252 >gi|261380655|ref|ZP_05985228.1| exodeoxyribonuclease III [Neisseria subflava NJ9703] gi|284796637|gb|EFC51984.1| exodeoxyribonuclease III [Neisseria subflava NJ9703] Length = 259 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 65/264 (24%), Positives = 120/264 (45%), Gaps = 13/264 (4%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ + + NVN IR+ +I + DI+C+QE K ++ + + H Sbjct: 1 MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADLSDDMKNPHGMHGYWHC 60 Query: 62 --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 ++ Y+GVA+ SK +P + + ++ D + RF+ F L + +LYLP G+ Sbjct: 61 AEKRGYSGVAVYSKRKPDNVQIGMGVEEFDREGRFVRCDFG----KLSVISLYLPSGSSA 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K ++ F ++ GD+NI Q D N + ++ F E Sbjct: 117 EERQQV-KYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEE 175 Query: 180 RQSF-QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R+ + + +G+TD R + Y++W +++K+ G RID+ M++PE + S Sbjct: 176 REWIGKVIHKLGWTDMWRTLYPDVPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVS 235 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 A + K SDH P++V D Sbjct: 236 AHVYKD----EKFSDHAPLVVEYD 255 >gi|154148197|ref|YP_001407152.1| exodeoxyribonuclease III [Campylobacter hominis ATCC BAA-381] gi|153804206|gb|ABS51213.1| exodeoxyribonuclease III [Campylobacter hominis ATCC BAA-381] Length = 251 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 62/264 (23%), Positives = 108/264 (40%), Gaps = 17/264 (6%) Query: 4 VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH---IET 59 + + +WNVN +RA + N WI + PD + LQE K + P E +L + + + Sbjct: 1 MKLISWNVNGLRACVKNDALGWITQEKPDFLALQEIKVSEDKIPSEIY-NLGFENLDVNS 59 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 + Y+GVA L + ++ + ++ Sbjct: 60 GEKAGYSGVASLHNLKCATFKNLFFQENEGRVLQHDFNEISLFNIYF--------PNGQK 111 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + + K+ + +FL + + + +I GD N + D NP + + F Sbjct: 112 DENRLNFKMEFYDKFLIYLDKLKKQGRKIIICGDVNTAHREIDLKNPKSNSDRSGFLPIE 171 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R KL + GF D RA + YS+W Y ++ +KN G RID+ +S + L +A Sbjct: 172 RAWIDKLLSHGFVDTFRAINGDKIAYSWWSYRFNARAKNAGWRIDYFFISEDLRENLTNA 231 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 I K SDH PV + +++ Sbjct: 232 FILDDI----KGSDHCPVGIEINL 251 >gi|238928084|ref|ZP_04659844.1| exodeoxyribonuclease III Xth [Selenomonas flueggei ATCC 43531] gi|238884044|gb|EEQ47682.1| exodeoxyribonuclease III Xth [Selenomonas flueggei ATCC 43531] Length = 250 Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats. Identities = 65/261 (24%), Positives = 105/261 (40%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + +E + D CLQETK ++ + L + + + Sbjct: 1 MRFVSWNVNGLRAALKKGFMESFRELDADAFCLQETKMQEGQAILD-LPGYEQYFYSAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI ++ +P+ + + D + R I F + Sbjct: 60 KGYSGTAIFTRVKPLSVAYGIGISAHDNEGRVITMEFDDVYLVTVYTPNAKRALERLDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + R L ++P++ GD N+ D NP +A FT E R Sbjct: 120 M------MWEDAFRAFLLGLRAKKPVVVCGDLNVAHTEIDLKNPKSNRRNAGFTDEERGK 173 Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L GF D RA + Y++W Y + N G RID+ ++S E + +A I Sbjct: 174 FTELLQAGFIDTFRALYPDRTGAYTWWSYLRHARETNAGWRIDYFLVSAELRDRIAAAEI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 G SDH PV ++L Sbjct: 234 HADIFG----SDHCPVSLTLK 250 >gi|312843088|gb|ADR02759.1| XthA [Treponema pallidum subsp. pertenue] gi|313505178|gb|ADR64329.1| exodeoxyribonuclease III [Treponema pallidum subsp. pertenue] gi|313505198|gb|ADR64348.1| exodeoxyribonuclease III [Treponema pallidum subsp. pertenue str. Gauthier] gi|313505297|gb|ADR64434.1| exodeoxyribonuclease III [Treponema pallidum] Length = 264 Score = 176 bits (447), Expect = 3e-42, Method: Composition-based stats. Identities = 57/267 (21%), Positives = 100/267 (37%), Gaps = 20/267 (7%) Query: 5 TVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS---------LN 54 + +WNVN IRA + +W+ PD++CLQE K + Sbjct: 6 RIISWNVNGIRAIERKDFLSWLAREAPDVLCLQEIKAHESQLSAALRAPVWSAGAGGTYY 65 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 + + + Y+G A+ SK P + + + N Sbjct: 66 TYFHSAQRPGYSGTALFSKRAPDAVRFFGVPAFDCEGRMLAARFGELTVVSAYFPNAQ-- 123 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 + K+ + F F + + +I GDYNI + D +P E + Sbjct: 124 ----EGGKRLAYKLDFCAAFRAFCDEERTAGQHVILCGDYNIAHKEIDLAHPQENEGNPG 179 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 F + R G+ D+ RA Y++W Y A + ++N G RID+ + + Sbjct: 180 FLPQERAWMDTFTEAGYADSFRAFCTEGQQYTWWSYRARARARNIGWRIDYQCVDQAFLA 239 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261 + S++I ++ G SDH PV ++ Sbjct: 240 RVTSSQILSEVTG----SDHCPVCLTY 262 >gi|149184981|ref|ZP_01863298.1| exonuclease III [Erythrobacter sp. SD-21] gi|148831092|gb|EDL49526.1| exonuclease III [Erythrobacter sp. SD-21] Length = 263 Score = 176 bits (447), Expect = 3e-42, Method: Composition-based stats. Identities = 76/265 (28%), Positives = 118/265 (44%), Gaps = 6/265 (2%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCG 61 +V+VATWN+NS+R R+ + ++KE PD++CLQE K ++ FP+E ++L Y HI G Sbjct: 1 MVSVATWNINSVRLRMPIVERFLKETAPDVLCLQEIKCQEHQFPYEAFKALGYEHIAVHG 60 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 QK Y+GVA +S+ E H + +AR + + + G+ Sbjct: 61 QKGYHGVATVSRVPIREFSRH--DWQDNGEARHVGVELPEHDGMIVENVYVPAGGDEPDR 118 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + R ++ P + GD+NI P D +N T + Sbjct: 119 EINVKFGQKLDFLERMTRWADAVDRPTLIVGDFNIAPLESDVWNHKQLLKVVSHTPIEVE 178 Query: 182 SFQKLQNMGFTDAIRATH--DTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLLHS 238 S Q+ + I H YS+W Y A W + ++G R+DH+ SPE Sbjct: 179 SLQRFMDAHGWADIGREHIKAPERYYSWWSYRAKDWKANDRGRRLDHMWASPELAKQASG 238 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263 + R W KPSDH P++ DI Sbjct: 239 HSVHEYARDWEKPSDHVPLVTEFDI 263 >gi|126738695|ref|ZP_01754400.1| exodeoxyribonuclease III, putative [Roseobacter sp. SK209-2-6] gi|126720494|gb|EBA17200.1| exodeoxyribonuclease III, putative [Roseobacter sp. SK209-2-6] Length = 276 Score = 176 bits (447), Expect = 3e-42, Method: Composition-based stats. Identities = 85/264 (32%), Positives = 121/264 (45%), Gaps = 10/264 (3%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQK 63 T+ATWN+NS+R R + ++E PD++CLQE K+ + P E SL Y H+ GQK Sbjct: 18 TLATWNINSVRLREDLVLKLLQEEAPDVLCLQECKSPVEKIPTEGFASLGYHHMVARGQK 77 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 YNGVAILSK ++ + + E + I N Y+P G + Sbjct: 78 GYNGVAILSKLPLKDVGDKDFANLGHARHVAAELENG-----VTIQNFYVPAGGDKPDRE 132 Query: 124 YDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180 ++K +L E P GD NI P+ D ++ T EV Sbjct: 133 VNEKFGQKLDYLTEMRDWFRSEAPKKSILVGDLNIAPREEDVWDHKKMLKVVSHTPIEVE 192 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHSA 239 + + G+ D RA LYS+W Y A W +KG R+DH+ + + + S+ Sbjct: 193 HLAEVQEAGGWQDVTRADIPDGLLYSWWSYRAKDWDAADKGRRLDHVWATGDISQSASSS 252 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 RI RGW KPSDH PV S D+ Sbjct: 253 RILRAARGWEKPSDHAPVFASFDL 276 >gi|91774073|ref|YP_566765.1| exodeoxyribonuclease III [Methanococcoides burtonii DSM 6242] gi|91713088|gb|ABE53015.1| Exodeoxyribonuclease III [Methanococcoides burtonii DSM 6242] Length = 251 Score = 176 bits (447), Expect = 3e-42, Method: Composition-based stats. Identities = 63/259 (24%), Positives = 109/259 (42%), Gaps = 12/259 (4%) Query: 12 NSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETCGQKSYNGV 68 N +R+ + W++ PDI+CLQETK + P E Y + + +K Y+GV Sbjct: 2 NGLRSMLKKGFVEWMEATQPDILCLQETKATETQLPKELRHIHGYVPYFFSAERKGYSGV 61 Query: 69 AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKI 128 I +K P+E+ L D + R T + + + N+Y P+G + K+ Sbjct: 62 GIYTKVPPVEVKYGLGVPRFDKEGR----TLIVEFEDFALFNIYFPNGKASDER-LEYKM 116 Query: 129 SWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN 188 + F+ A + + +I GD N + D P E + F + R+ Sbjct: 117 DFYNAFMEVADSMKDAGKNVIICGDVNTAHKEIDLARPKQNERSSGFLPQEREWIDTFLG 176 Query: 189 MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGW 248 G+ D +R Y++WD + +N G RID+ S + SA I + G Sbjct: 177 HGYLDTLRMFEPESGNYTWWDMKTRARDRNVGWRIDYFFASVSLKDRIRSAYILSDVMG- 235 Query: 249 TKPSDHTPVIVSLDIPEPR 267 SDH P+ + +++ + Sbjct: 236 ---SDHCPIGIEVELGDSS 251 >gi|73539900|ref|YP_294420.1| AP endonuclease [Ralstonia eutropha JMP134] gi|72117313|gb|AAZ59576.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Ralstonia eutropha JMP134] Length = 258 Score = 176 bits (447), Expect = 3e-42, Method: Composition-based stats. Identities = 60/266 (22%), Positives = 117/266 (43%), Gaps = 13/266 (4%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IET 59 ++ + + N+N IR+ W+ + + D++C+QE K + + L YH Sbjct: 1 MLRIISANLNGIRSASKKGFFEWMGKQDADMVCVQELKAQAADMTEAFLAPHGYHGYFHY 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GV + ++++P ++T + D + R++E + L + ++Y+P G+ Sbjct: 61 AEKKGYSGVGLYTRHKPERVITGFGNPEFDSEGRYVE----VQYPHLAVISVYVPSGSSS 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K +++ FL Q ++ GD NI + D N ++ F E Sbjct: 117 EERQQA-KFRFMEAFLPHLLQLKASGREIVLCGDVNIAHKEIDIKNWKGNLKNSGFLPEE 175 Query: 180 RQSFQKLQNMG-FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R +L +M + D R Y++W +++KN G RID+ + +P+ H Sbjct: 176 RAWIGQLFDMHGYVDVFRQLDPRPEQYTWWSNRGQAYAKNVGWRIDYHLATPKIAGTAHV 235 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIP 264 I K SDH P+ + + P Sbjct: 236 CSIYKD----EKFSDHAPLSIDYNYP 257 >gi|261840198|gb|ACX99963.1| exodeoxyribonuclease [Helicobacter pylori 52] Length = 250 Score = 176 bits (447), Expect = 3e-42, Method: Composition-based stats. Identities = 69/260 (26%), Positives = 115/260 (44%), Gaps = 13/260 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + + D+ C+QE+K + + FE + + Sbjct: 1 MKLISWNVNGLRACMTKGFMDFFNSVDADVFCIQESKMQQEQNIFE-FKGYFDFWNCAIK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+GV +K +P+ + + D+ D + R + F + + N+Y P+ S Sbjct: 60 KGYSGVVTFTKKEPLSVSYGINIDEHDKEGRVVTCEFE----SFYLVNVYTPNSQQALSR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 ++ R + LEL++P+I GD N+ D NP +A F+ E R Sbjct: 116 LSYRMSWEVE--FRKFLKALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L N GF D R + Y++W Y + K+ G RID+ + S + L A I Sbjct: 174 FNELLNAGFIDTFRYFYPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALI 233 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 G SDH PV + L Sbjct: 234 YKDILG----SDHCPVGLEL 249 >gi|315637812|ref|ZP_07893002.1| exodeoxyribonuclease III [Campylobacter upsaliensis JV21] gi|315482053|gb|EFU72667.1| exodeoxyribonuclease III [Campylobacter upsaliensis JV21] Length = 252 Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats. Identities = 63/262 (24%), Positives = 99/262 (37%), Gaps = 12/262 (4%) Query: 4 VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WN+N +RA W++E D I QE K + FP + + H+ Sbjct: 1 MKLLSWNINGLRAICDKGGLEWLREEKIDFIGFQEIKASEDKFPKKIYEFPFKHMYFNSA 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K ++S D D I + N Sbjct: 61 KRAGYSGVMSLCNFESETKKCEFFDDDEGRVLEHRFNNIVLFNIYFPN------GQKDEI 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + K+ + FL + ++ L+ + +I GD N + D +P N + F R Sbjct: 115 RLNHKMKFYADFLVYLNKLLKEGKEVIICGDVNTAHKEIDLTHPKANANTSGFLPIERAW 174 Query: 183 FQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 L +GF D R + D YS+W Y + +N G RID+ +S S L +A I Sbjct: 175 IDDLLALGFIDTFREINGDIKEKYSWWSYRMKARERNVGWRIDYFFISKGLKSKLKNAFI 234 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 G SDH PV + LDI Sbjct: 235 KDDIFG----SDHAPVGIELDI 252 >gi|300782769|ref|YP_003763060.1| exodeoxyribonuclease III [Amycolatopsis mediterranei U32] gi|299792283|gb|ADJ42658.1| exodeoxyribonuclease III [Amycolatopsis mediterranei U32] Length = 278 Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats. Identities = 57/280 (20%), Positives = 104/280 (37%), Gaps = 14/280 (5%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 V+TV+T NVN +RA W+ D++ QE + E P + + Sbjct: 4 VLTVSTVNVNGLRAAAKKGFVEWLAATKADVVACQEVRAEASQLPAAVVGPDGWFSVHAP 63 Query: 62 --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 K NGVA+ S+ +P E+ + + R++E + + Sbjct: 64 SAVKGRNGVAVYSRVEPEEVRIGFGEPEFEDSGRYLEVHLPN-----VVVASLYLPSGDV 118 Query: 120 TSTKYDDKISWIKRFLRF----ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + + D+K ++ FL + ++ + GD+NI D N ++ F Sbjct: 119 GTERQDEKERFMAAFLPYLAELRAKAAAAGREAVVVGDWNIAYDTVDLKNWRGNRKNSGF 178 Query: 176 TLEVRQS--FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 E R + R + Y++W Y ++ + G RID + +P Sbjct: 179 LPEERAWLGRVYTEAGYTDVQRRLDPEGPGPYTWWSYRGQAFDNDSGWRIDCQLATPGLA 238 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDS 273 + ++ + SDH PV + DI PR+ Q+ Sbjct: 239 EKVVDVVVERAAAYDQRWSDHAPVTATYDIDFPREPAQEV 278 >gi|163739851|ref|ZP_02147258.1| exodeoxyribonuclease III [Phaeobacter gallaeciensis BS107] gi|163743404|ref|ZP_02150784.1| exodeoxyribonuclease III, putative [Phaeobacter gallaeciensis 2.10] gi|161383398|gb|EDQ07787.1| exodeoxyribonuclease III, putative [Phaeobacter gallaeciensis 2.10] gi|161386885|gb|EDQ11247.1| exodeoxyribonuclease III [Phaeobacter gallaeciensis BS107] Length = 262 Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats. Identities = 85/268 (31%), Positives = 120/268 (44%), Gaps = 11/268 (4%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIET 59 MS T+ATWN+NS+R R + + E PD++CLQE K+ P E L Y H+ Sbjct: 1 MS-FTLATWNINSVRLREPIVCKLLAEEGPDVLCLQECKSPVDKIPMEQFAELGYGHMVA 59 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 GQK YNGVAILS+ ++ D + + I N Y+P G + Sbjct: 60 RGQKGYNGVAILSRLPIEDVGDKDFADLGHARHIAGRLENG-----VTIHNFYVPAGGDV 114 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL 177 ++K +L E P GD NI P+ D ++ T Sbjct: 115 PDRAVNEKFGQKLDYLTDMRDWFNAERPEKSILVGDLNIAPREDDVWDHKKLLKVVSHTP 174 Query: 178 -EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSL 235 EV + G++D R LYS+W Y A W +KG R+DHI +P+ + Sbjct: 175 IEVEHFADVMDAGGWSDVTRNDIPDGQLYSWWSYRAKDWDAADKGRRLDHIWATPDIKNA 234 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 HS+R+ RGW KPSDH PV + D+ Sbjct: 235 AHSSRVMRDARGWEKPSDHAPVFATFDL 262 >gi|56698248|ref|YP_168621.1| exodeoxyribonuclease III, putative [Ruegeria pomeroyi DSS-3] gi|56679985|gb|AAV96651.1| exodeoxyribonuclease III, putative [Ruegeria pomeroyi DSS-3] Length = 262 Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats. Identities = 84/264 (31%), Positives = 119/264 (45%), Gaps = 10/264 (3%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQK 63 T+ATWN+NS+R R + + E PDI+CLQE K+ P E L Y H+ GQK Sbjct: 4 TLATWNINSVRLREPIVCKLLAEEGPDILCLQEIKSPVDKMPVEGFADLGYRHVVAHGQK 63 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 YNGVAILS+ E+ + + I N Y+P G + + Sbjct: 64 GYNGVAILSRLPIEEVGREDFATLGHARHVAARLENG-----VTIHNFYVPAGGDVPDRE 118 Query: 124 YDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180 ++K +L P GD NI P+ D +N T EV Sbjct: 119 VNEKFGQKLDYLTEMRDWFHANAPEKSILVGDLNIAPREDDVWNHKQLLKIVSHTPIEVD 178 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLLHSA 239 Q + + + D R LYS+W Y A W + +KG R+DH+ +P+ ++ HS+ Sbjct: 179 HLGQVMDSGKWVDITRQDIPQGLLYSWWSYRAKDWSAADKGRRLDHVWATPDISNAGHSS 238 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 RI RGW +PSDH PV S D+ Sbjct: 239 RILRDARGWEQPSDHAPVFASFDL 262 >gi|118375590|ref|XP_001020979.1| exodeoxyribonuclease III family protein [Tetrahymena thermophila] gi|89302746|gb|EAS00734.1| exodeoxyribonuclease III family protein [Tetrahymena thermophila SB210] Length = 396 Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats. Identities = 75/280 (26%), Positives = 124/280 (44%), Gaps = 18/280 (6%) Query: 4 VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSL---NYHIE 58 + +A WNVN +RA + L +IK+ NPDI+CL ETK ++ NF E + Y+ Sbjct: 117 IKIACWNVNGLRAVLKREDLQKYIKQENPDILCLNETKIDESNFIKEKVYKDIPSGYYQY 176 Query: 59 TCGQKS----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 Y+GV+I SK + I I + + + + R + A F + Sbjct: 177 WNFCIPPIKGYSGVSIFSKEKVISIKKGIDIAEHENEGRVLTAEFDKFYLVVVYVPNAGS 236 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 + D +++ + + +L+L++ +I GD N+ Q D NP N Sbjct: 237 E-----LVRLDYRVNSFDKDFQNYLNQLKLKKNVILCGDLNVAHQEIDIANPKSNRNSPG 291 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 FT+E R SF K G+ D R + YS+W + N G RID+ +++ E S Sbjct: 292 FTIEERNSFSKFLESGWIDTFRFLYPETIKYSWWSVRTKARESNIGWRIDYFVVNKEFKS 351 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDST 274 + + I+ G SDH PV L++ ++ + S Sbjct: 352 SIKDSMINNNIYG----SDHCPVEFILNLDAIQQNETSSN 387 >gi|256828507|ref|YP_003157235.1| exodeoxyribonuclease III Xth [Desulfomicrobium baculatum DSM 4028] gi|256577683|gb|ACU88819.1| exodeoxyribonuclease III Xth [Desulfomicrobium baculatum DSM 4028] Length = 257 Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats. Identities = 72/267 (26%), Positives = 114/267 (42%), Gaps = 16/267 (5%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC- 60 ++ + +WNVN RA + W++ PD++ LQE K E+ + L YH Sbjct: 2 ILRMHSWNVNGFRAVLGKGFRDWLERAAPDVLGLQEVKAEEGQVGGDRLFD-GYHCYWNA 60 Query: 61 --GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 +K Y+G A S+ +P+ + LP + R I F N+Y P+G Sbjct: 61 ARSKKGYSGTACYSRLEPLAVQRGLPDTRFQGEGRVIRLEFE----KFHYFNVYFPNGQM 116 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 D +Q L ++P++ GD+N + D N E + F Sbjct: 117 SPDRL--DYKLGFYDAFLAYAQELRRDKPIVVCGDFNTAHREIDLKNAKANEKTSGFLPI 174 Query: 179 VRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 R + G+ D R H D YS+W Y + S+N G RID+ +S E +S + Sbjct: 175 ERAWMDRFVAHGYVDTFRRCHGDVEDAYSWWTYRFGARSRNVGWRIDYFFVSEELSSAVR 234 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDIP 264 A I+ G SDH PV ++L++P Sbjct: 235 DAWIEADVPG----SDHCPVGLALELP 257 >gi|99079894|ref|YP_612048.1| exodeoxyribonuclease III [Ruegeria sp. TM1040] gi|99036174|gb|ABF62786.1| exodeoxyribonuclease III [Ruegeria sp. TM1040] Length = 262 Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats. Identities = 87/268 (32%), Positives = 122/268 (45%), Gaps = 11/268 (4%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIET 59 MS T+ATWN+NS+R R + ++E PD++CLQE K+ P E ++L Y H+ Sbjct: 1 MS-FTLATWNINSVRLREPIVVKLLEEEGPDVLCLQECKSPVDKIPMEAFRALGYEHMIA 59 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 GQK YNGVAILS+ ++ GD + I N Y+P G Sbjct: 60 RGQKGYNGVAILSRLPIEDV-----GDKDFASLGHARHVAGRLENGVTIHNFYVPAGGDE 114 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL 177 + + K +L E P GD NI P+ D ++ T Sbjct: 115 PDREKNVKFGQKLDYLTEMRDWFHAERPEKSVLVGDLNIAPREDDVWDHKKLLKVVSHTP 174 Query: 178 -EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSL 235 EV Q + G+ D R LYS+W Y A W +KG R+DH+ + + T+ Sbjct: 175 IEVEHLDQVMDAGGWADVTRKDIPEGQLYSWWSYRAKDWDAADKGRRLDHVWTTADITNA 234 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 HS+RI RGW KPSDH PV + D+ Sbjct: 235 AHSSRILRHARGWEKPSDHAPVFATFDL 262 >gi|83941780|ref|ZP_00954242.1| exodeoxyribonuclease III, putative [Sulfitobacter sp. EE-36] gi|83847600|gb|EAP85475.1| exodeoxyribonuclease III, putative [Sulfitobacter sp. EE-36] Length = 262 Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats. Identities = 80/264 (30%), Positives = 119/264 (45%), Gaps = 10/264 (3%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQK 63 T+ATWN+NS+R R + + E+ PD++CLQE K+ P Y H+ GQK Sbjct: 4 TLATWNINSVRLREPIVLKLLAEHGPDVLCLQECKSPVDKIPTAAFIEAGYTHMVARGQK 63 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 YNGVAILS+ + GD + + N Y+P G + + Sbjct: 64 GYNGVAILSRLPLV-----DAGDQDFATLGHARHIAAKLENGVTVHNFYVPAGGDVPDRE 118 Query: 124 YDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180 ++K +L ++P GD NI P+ D ++ T EV Sbjct: 119 VNEKFGQKLDYLADMRDWFHGDKPEKSILVGDLNIAPREDDVWDHKKLLKVVSHTPIEVE 178 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHSA 239 + + GF D R +LYS+W Y A W +KG R+DH+ +P+ + HS+ Sbjct: 179 KLAETQDAGGFVDVTRQDIPQGNLYSWWSYRAKDWDAADKGRRLDHVWATPDISGAAHSS 238 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 R+ RGW KPSDH PV + D+ Sbjct: 239 RVLRDARGWEKPSDHAPVFATFDL 262 >gi|323342310|ref|ZP_08082542.1| exodeoxyribonuclease III [Erysipelothrix rhusiopathiae ATCC 19414] gi|322463422|gb|EFY08616.1| exodeoxyribonuclease III [Erysipelothrix rhusiopathiae ATCC 19414] Length = 252 Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats. Identities = 62/262 (23%), Positives = 118/262 (45%), Gaps = 13/262 (4%) Query: 3 VVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ + +WNVN +RA + + + D++CLQETK + ++ + + Sbjct: 1 MMKLISWNVNGLRAVMKKDFEGIFEAMDTDVLCLQETKMQAGQLDYDP-EGYYAYYNYAE 59 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G A+ ++ +P+ + + D+ + + R I + P I Sbjct: 60 KKGYSGTAVYTRIKPLNVTYGIQEDEHNTEGRVITCEYDDFFLVCVYTPNSQPELKRIDY 119 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + R + L+ +P++ GD N+ + D NP + F+ + R+ Sbjct: 120 RMQ------WEDDFREYLKMLDETKPVVLCGDLNVAHKEIDLKNPSANRKNPGFSDQERE 173 Query: 182 SFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 F L + GF D+ R H YS+W Y A++ S+N G RID+ ++S + + +A Sbjct: 174 QFTNLLDAGFIDSFRELHPNAIDRYSWWSYRANARSRNTGWRIDYFVVSERLRNAIEAAD 233 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I + G SDH PV++ L+ Sbjct: 234 ILDQVLG----SDHCPVMIKLN 251 >gi|29653648|ref|NP_819340.1| exodeoxyribonuclease III [Coxiella burnetii RSA 493] gi|29540910|gb|AAO89854.1| exodeoxyribonuclease III [Coxiella burnetii RSA 493] Length = 259 Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats. Identities = 63/263 (23%), Positives = 109/263 (41%), Gaps = 13/263 (4%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + T N+N IRA W+K DI+CLQETK + + YH Sbjct: 1 MRIITLNLNGIRAAARRGFFDWLKRQKADIVCLQETKACLEITNGDQFHPKGYHCYYHDA 60 Query: 63 KS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + Y+GV I + +P + T L + D + R+I+A F + Sbjct: 61 EKSGYSGVGIYCREKPDRVTTRLGWEHADKEGRYIQADFGSLSV-----ASLYMPSGTTG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K ++ R+++ + + I GD+NI+ + D N + + E R Sbjct: 116 EHRQKIKFDFMDRYMKRLKNIVHSKRSFIICGDWNIVHKEIDIKNFKSNQKYSGCLPEER 175 Query: 181 QS-FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + +G DA R + Y++W +W KN G RID+ +++ + + + S Sbjct: 176 AWLDEVFTKVGLVDAFRVVNQKPDQYTWWSSRGRAWEKNVGWRIDYQVITSDLKNSVKSE 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 RI R SDH P+I+ + Sbjct: 236 RIYKDKR----FSDHAPLIIDYE 254 >gi|295698348|ref|YP_003603003.1| exodeoxyribonuclease III [Candidatus Riesia pediculicola USDA] gi|291157399|gb|ADD79844.1| exodeoxyribonuclease III [Candidatus Riesia pediculicola USDA] Length = 267 Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats. Identities = 77/268 (28%), Positives = 130/268 (48%), Gaps = 9/268 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N IRA H L +K+ +PDII LQETK E+ FP + YHI G+K Sbjct: 1 MKIVSFNINGIRAHFHQLYEIVKKYDPDIIGLQETKVENSLFPKDGF-DHKYHIYLNGRK 59 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 S++GVA+ SK + +I ++ + + R I A ++I N+Y P G + Sbjct: 60 SHHGVALFSKKKLFDINIRFFKENSNEEHRVISANIFFQETEIQIINIYCPQGENRNNKI 119 Query: 124 YDDKISWIKRF-LRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACFT 176 +K + +++ +++ + +I GD NI P+ D N I F Sbjct: 120 KFNKKKNFYKNLIKYVQKKIFENKNIILMGDMNISPEDQDIGIDPYHQNRWINLGKCGFL 179 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHH-LYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R +KL++ G D R + +S++DY ++ + G+RID I++S + Sbjct: 180 PEERIWMKKLKSFGLIDTYRKRNFFKKNKFSWFDYRSNGFLNKVGLRIDFILVSKKLFDS 239 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 S+ ID R +PSDH P+ +I Sbjct: 240 CRSSGIDYSIRSMKRPSDHAPIWAFFEI 267 >gi|298293365|ref|YP_003695304.1| exodeoxyribonuclease III [Starkeya novella DSM 506] gi|296929876|gb|ADH90685.1| exodeoxyribonuclease III [Starkeya novella DSM 506] Length = 272 Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats. Identities = 84/270 (31%), Positives = 119/270 (44%), Gaps = 10/270 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62 +T+ATWN+NS+R RI + E PD+ICLQETKT D FP + Y H GQ Sbjct: 3 LTIATWNINSVRLRIGLVEKLAAEYQPDVICLQETKTPDDRFPLKDAAKFGYPHAAIHGQ 62 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIE-ATFTINTQTLRIGNLYLPHGNPITS 121 K Y+GVAILSK ++ D D + + L I N Y+P G I Sbjct: 63 KGYHGVAILSKRPFDQVSRQGFCDIGDARHICVTLGREAGLEAPLTIHNFYIPAGGDIPD 122 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIF-----AGDYNIIPQPHDCYNPIIWENDACFT 176 ++K FL A+ +L GD NI P D ++ + T Sbjct: 123 PALNEKFRHKLAFLDEATMWEQLHPEDPTARSVLVGDLNIAPLETDVWSHKQLLDVVSHT 182 Query: 177 LEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEAT 233 + +KLQ G + LY++W Y A W N+G R+DH+ +P Sbjct: 183 PIEVEKLEKLQAAGRWVDVMRNFVPPDERLYTWWSYRAADWEASNRGRRLDHVWATPAFA 242 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + + R W +PSDH PV+V+ D+ Sbjct: 243 PTARAMNVVRAARSWERPSDHVPVVVTFDV 272 >gi|284047996|ref|YP_003398335.1| exodeoxyribonuclease III [Acidaminococcus fermentans DSM 20731] gi|283952217|gb|ADB47020.1| exodeoxyribonuclease III [Acidaminococcus fermentans DSM 20731] Length = 250 Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats. Identities = 69/259 (26%), Positives = 120/259 (46%), Gaps = 13/259 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + TWNVN +RA + A ++ DI+C+QETK + + F+ + + + + Sbjct: 1 MKLITWNVNGLRACMNKGFADFMTAAGADIVCVQETKMQREQASFD-FPGYHEYWNSAVK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G A+ SK +P+ + L ++ D + R I A + + N+Y P+ + Sbjct: 60 KGYSGTAVFSKTEPLSVTYGLGQEEHDQEGRVITAEYP----DFYLVNVYTPNSQRGLTR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + + L ++P+I GD N+ QP D NP +A FT E R Sbjct: 116 L--EYRMQWEDVFQDYCAGLARKKPVIVCGDLNVAAQPIDLKNPDSNHKNAGFTDEERAK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 FQ+ + GF D+ R+ + Y++W Y + +N G RID+ ++S + I Sbjct: 174 FQQFLDHGFVDSFRSLYPDKEGAYTWWSYMFKARERNAGWRIDYFLVSQNGKDRIQDVII 233 Query: 242 DTKPRGWTKPSDHTPVIVS 260 + G SDH PV + Sbjct: 234 HNEVMG----SDHCPVELE 248 >gi|261393405|emb|CAX51041.1| putative exodeoxyribonuclease [Neisseria meningitidis 8013] Length = 259 Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats. Identities = 65/264 (24%), Positives = 120/264 (45%), Gaps = 13/264 (4%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ + + NVN IR+ +I + DI+C+QE K ++ + + H Sbjct: 1 MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADLSADMKNPHGMHGHWHC 60 Query: 62 --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 ++ Y+GVA+ SK +P + + ++ D + RF+ F L + +LYLP G+ Sbjct: 61 AEKRGYSGVAVYSKRKPDNVQIGMGIEEFDREGRFVRCDFD----RLSVISLYLPSGSSA 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K ++ F ++ GD+NI Q D N + ++ F E Sbjct: 117 EERQQV-KYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEE 175 Query: 180 RQSF-QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R+ + + +G+TD R + Y++W +++K+ G RID+ M++PE + S Sbjct: 176 REWIGKVIHKLGWTDMWRTLYPDVPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVS 235 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 A + K SDH P++V D Sbjct: 236 AHVYKD----EKFSDHAPLVVEYD 255 >gi|149370979|ref|ZP_01890574.1| exodeoxyribonuclease III [unidentified eubacterium SCB49] gi|149355765|gb|EDM44323.1| exodeoxyribonuclease III [unidentified eubacterium SCB49] Length = 276 Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats. Identities = 72/269 (26%), Positives = 129/269 (47%), Gaps = 14/269 (5%) Query: 1 MSVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY---H 56 ++ + + ++NVN IRA + + W+ + + D++C+QETK + + + Y + Sbjct: 18 LAPMKILSYNVNGIRAAMRKEMLTWLTQTDADVVCIQETKANQDQVDTDAIVAAGYPYHY 77 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 + +K Y+GVAI K +P I + +D + R I + + I +LYLP G Sbjct: 78 WFSAQKKGYSGVAIFCKNEPNHIEYGTGIESMDFEGRNIRVDYDG----VSIMSLYLPSG 133 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 S + D K+ ++ F + ++ + L+ GDYNI + D +NP+ +N + F Sbjct: 134 --TNSARLDHKLEYMALFQDYVNELKKEIPNLVICGDYNICHEAIDIHNPVSNKNSSGFL 191 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 R+ + GF D+ R + Y++W Y A++ + NKG RID+ M++ + Sbjct: 192 PVEREWLGNFIDSGFIDSFRFLNKEPDNYTWWSYRANARANNKGWRIDYNMVATPLKEKI 251 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 A I SDH P +V LD+ Sbjct: 252 KRAVILPAA----VHSDHCPHMVELDMSA 276 >gi|258542179|ref|YP_003187612.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-01] gi|256633257|dbj|BAH99232.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-01] gi|256636316|dbj|BAI02285.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-03] gi|256639369|dbj|BAI05331.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-07] gi|256642425|dbj|BAI08380.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-22] gi|256645480|dbj|BAI11428.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-26] gi|256648533|dbj|BAI14474.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-32] gi|256651586|dbj|BAI17520.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654577|dbj|BAI20504.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-12] Length = 270 Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats. Identities = 77/267 (28%), Positives = 128/267 (47%), Gaps = 6/267 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62 + + TWN+NS+R R+ L ++ PD++CLQETK D FP + +++L + H+ G Sbjct: 5 MRLVTWNINSLRLRLPLLEKLVRHLAPDVVCLQETKVPDPLFPEDGVKALGFEHLHYRGM 64 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K YNGVAILS++ + T P R + AT + + + Y+P G + Sbjct: 65 KGYNGVAILSRHPLKPV-TQTPVWYGKEDCRHVAATVCAPEGDVELHDFYIPAGGDEPAP 123 Query: 123 KYDDKISWIKRFLRFASQRLELE--EPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + + K + F+ ++ + + GD+NI P HD ++ T Sbjct: 124 ETNPKFAHKLAFVEEVTEWFQSRPLNRTVLVGDFNIAPLEHDVWSHKQLLKIVSHTPPET 183 Query: 181 QSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLLHS 238 + + GF DA+R LY++W Y W K N+G R+DH+ ++P+ LH Sbjct: 184 ERLNRWLQTGFVDAMRHFVPADEKLYTWWSYRNRDWKKSNRGRRLDHVWMTPDLLPNLHG 243 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIPE 265 + + R W PSDH PV+V + + Sbjct: 244 MTVVREARDWESPSDHVPVVVDFSLSD 270 >gi|186474828|ref|YP_001856298.1| exodeoxyribonuclease III Xth [Burkholderia phymatum STM815] gi|184191287|gb|ACC69252.1| exodeoxyribonuclease III Xth [Burkholderia phymatum STM815] Length = 259 Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats. Identities = 63/263 (23%), Positives = 110/263 (41%), Gaps = 14/263 (5%) Query: 3 VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59 ++ V T N+N IR A W E D++C+QE K + E L + + + Sbjct: 1 MLRVITANLNGIRSAAKKGFFDWFGEQKADVVCVQEIKCSQDDMTPEFLAPHGFTGYFQH 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G + ++++P E+V ++ D + R++EA F L + ++Y+P G+ Sbjct: 61 AVKKGYSGAGLYTRHEPDEVVIGFGSEEFDPEGRYVEARFG----NLSVISVYVPSGSSG 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + L E +I GD NI+ + D N + ++ E Sbjct: 117 DERQQA--KYRFMDEFMPHLAELSREREVIVCGDVNIVHKEIDIKNWKGNQKNSGCLPEE 174 Query: 180 RQSFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R KL + G+ D R Y++W +++KN G RID+ + +P + Sbjct: 175 RAWLTKLFDEVGYVDVFRTLDQRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGVAATAKR 234 Query: 239 ARIDTKPRGWTKPSDHTPVIVSL 261 + K SDH PV V Sbjct: 235 VDVFRDI----KFSDHAPVTVDY 253 >gi|295691547|ref|YP_003595240.1| exodeoxyribonuclease III Xth [Caulobacter segnis ATCC 21756] gi|295433450|gb|ADG12622.1| exodeoxyribonuclease III Xth [Caulobacter segnis ATCC 21756] Length = 268 Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats. Identities = 77/272 (28%), Positives = 124/272 (45%), Gaps = 18/272 (6%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62 + +ATWNVNS+R R A ++ E+ PD++C+QE K +D FP E +++ H++ GQ Sbjct: 3 LRIATWNVNSVRLRAEQAARFVDEHAPDVLCMQEIKCQDGEFPREAFEAMGLPHLKIAGQ 62 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K ++GVAI S+ ++ T L + + I N Y+P G + Sbjct: 63 KGWHGVAIASRLPIEDVPT------LMNCREGHARCVAVKVAGVEIQNFYIPAGGDLPDR 116 Query: 123 KYDDKISWIKRFLRFASQRL---ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K F + L + ++PLI GD NI P +D ++ T Sbjct: 117 AANPKFDHKLDFYETLTAALKKRDPKDPLIVTGDLNIAPGENDVWSHRQMLKVVSHTPPE 176 Query: 180 RQSFQ--KLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLL 236 ++F AT + L+S+W Y A + K N+G+R+DHI+ SP Sbjct: 177 LEAFDALIKSMDLLDLPRLATPEPDKLFSWWSYRAADFRKSNRGLRLDHILASPGLRDAA 236 Query: 237 -----HSARIDTKPRGWTKPSDHTPVIVSLDI 263 ++R+ R W +PSDH PV L + Sbjct: 237 IVDGQVASRVHDDVREWERPSDHAPVTADLKV 268 >gi|78355598|ref|YP_387047.1| exodeoxyribonuclease III [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78218003|gb|ABB37352.1| exodeoxyribonuclease III [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 336 Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats. Identities = 70/268 (26%), Positives = 108/268 (40%), Gaps = 15/268 (5%) Query: 1 MSVVTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 +V + +WNVN RA R W + D+I LQETK + YH Sbjct: 79 FEIVKLYSWNVNGFRAIRQKPDWDWFSGCDADVIGLQETKAMPEQIDPADRNPAGYHSYW 138 Query: 60 ---CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 +K Y+GVA S+ +P+ + LP + + R I + N+Y P+G Sbjct: 139 LGATVKKGYSGVAAFSRREPLSVAYDLPVEQYQGEGRVIMLEYDA----FYYFNIYFPNG 194 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 +Q L ++P++ GD+N +P D P E + F Sbjct: 195 QSGDERLQ--YKLGFYDAFLEHAQTLRRKKPIVVCGDFNTAHRPVDLARPRENEGTSGFL 252 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHH-LYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 R K + G+ D R H +YS+W Y + +N G RID+ +S E Sbjct: 253 PVERAWMDKFIDHGYVDTFRLVHPDAQAMYSWWSYRFKARDRNVGWRIDYFFVSDELRHA 312 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + A I+ + G SDH PV + L + Sbjct: 313 VKDATIEMEVFG----SDHCPVGLELAL 336 >gi|319940717|ref|ZP_08015059.1| exodeoxyribonuclease III [Sutterella wadsworthensis 3_1_45B] gi|319805868|gb|EFW02635.1| exodeoxyribonuclease III [Sutterella wadsworthensis 3_1_45B] Length = 263 Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats. Identities = 59/265 (22%), Positives = 108/265 (40%), Gaps = 13/265 (4%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59 + + T+N N IR+ W++ +PD++C+QE K ++ + + L + + Sbjct: 1 MFRIITFNANGIRSASRKGFFTWLRTMSPDVLCMQELKAQESDLTEDLRTPLGFRGYFHC 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G + S+ +P + T + D + R++EA F I Sbjct: 61 AQKKGYSGCGLWSRVKPFAVRTGFGNSEFDAEGRYVEADFGS-----VIVISVYFPSGSS 115 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + + K ++ F + + +I GD NI + D N + + F E Sbjct: 116 SDDRQSAKFRFLDAFKVHMDELRQSGREVIICGDINIAHKEIDLKNWKGNLDHSGFLPEE 175 Query: 180 RQS-FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R Q+ G+ D R Y++W + +KN G RID+ + +P +L + Sbjct: 176 RAWLDQRFGKEGWVDVFRMLDPRPERYTWWSQRGQARAKNVGWRIDYQITTPGIAALARN 235 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263 I K SDH P+ V D+ Sbjct: 236 TGIFPD----EKFSDHAPLWVDYDL 256 >gi|170693993|ref|ZP_02885149.1| exodeoxyribonuclease III Xth [Burkholderia graminis C4D1M] gi|170141065|gb|EDT09237.1| exodeoxyribonuclease III Xth [Burkholderia graminis C4D1M] Length = 260 Score = 176 bits (446), Expect = 3e-42, Method: Composition-based stats. Identities = 64/264 (24%), Positives = 113/264 (42%), Gaps = 14/264 (5%) Query: 3 VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59 ++ V T N+N IR A W E N D++C+QE K + E L ++ + + Sbjct: 1 MLRVITANLNGIRSAAKKGFFDWFGEQNADVLCVQEIKCSQDDMTPEFLAPHDFTGYFQH 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G + ++++P E+V ++ D + R++E F L + ++Y+P G+ Sbjct: 61 AVKKGYSGAGVYTRHEPDEVVIGFGSEEFDPEGRYVELRFG----KLSVVSVYVPSGSSG 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + +L E +I GD NI+ + D N + ++ E Sbjct: 117 EERQQA--KYRFMDEFMPHLAQLAREREVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEE 174 Query: 180 RQSFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R KL + G+ D R Y++W +++KN G RID+ + +P S Sbjct: 175 RAWLTKLFDEVGYVDVFRTLDQRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGIASKAKR 234 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 + K SDH P+ V D Sbjct: 235 TEVFRDI----KFSDHAPLTVDYD 254 >gi|261400777|ref|ZP_05986902.1| exodeoxyribonuclease III [Neisseria lactamica ATCC 23970] gi|269209377|gb|EEZ75832.1| exodeoxyribonuclease III [Neisseria lactamica ATCC 23970] Length = 259 Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats. Identities = 64/264 (24%), Positives = 120/264 (45%), Gaps = 13/264 (4%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ + + NVN IR+ +I + DI+C+QE K ++ + + H Sbjct: 1 MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADLSADMKNPHGMHGYWHC 60 Query: 62 --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 ++ Y+GVA+ K +P + + ++ D + RF+ F L + +LYLP G+ Sbjct: 61 AEKRGYSGVAVYGKRKPDNVQIGMGIEEFDREGRFVRCDFG----RLSVISLYLPSGSSA 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K ++ F ++ GD+NI Q D N + ++ F E Sbjct: 117 EERQQV-KYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEE 175 Query: 180 RQSF-QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R+ + + +G+TD R + + Y++W +++K+ G RID+ M++PE + S Sbjct: 176 REWIGKVIHKLGWTDMWRTLYPDNPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVS 235 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 A + K SDH P++V D Sbjct: 236 AHVYKD----EKFSDHAPLVVEYD 255 >gi|167561089|ref|ZP_02354005.1| exodeoxyribonuclease III [Burkholderia oklahomensis EO147] gi|167568307|ref|ZP_02361181.1| exodeoxyribonuclease III [Burkholderia oklahomensis C6786] Length = 256 Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats. Identities = 61/264 (23%), Positives = 110/264 (41%), Gaps = 14/264 (5%) Query: 3 VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59 ++ V T N+N IR A W+ E N D +C+QE K + P E ++ + + Sbjct: 1 MLRVITANLNGIRSAAKKGFFDWLGEQNADCVCVQEIKVSADDLPAEFVEPHGFRSYFHH 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G + + +P +++ + D + R++EA F L + ++Y+P G+ Sbjct: 61 AEKKGYSGAGLYLRREPDDVIIGYGSSEFDSEGRYVEARFG----KLSVVSVYVPSGSSG 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + L+ + +I GD NI+ + D N + ++ E Sbjct: 117 DERQQA--KYRFMDEFMPHLAELKAKREVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEE 174 Query: 180 RQSFQK-LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R K ++G+ D R Y++W +++KN G RID+ + +P Sbjct: 175 RAWLTKLFDDVGYVDVFRTLDARPEQYTWWSNRGQAYAKNVGWRIDYQIATPGIAGTAKR 234 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 I K SDH P+ V D Sbjct: 235 TSIFRDI----KFSDHAPLTVDYD 254 >gi|15639119|ref|NP_218565.1| exodeoxyribonuclease (exoA) [Treponema pallidum subsp. pallidum str. Nichols] gi|189025359|ref|YP_001933131.1| exodeoxyribonuclease [Treponema pallidum subsp. pallidum SS14] gi|3322391|gb|AAC65116.1| exodeoxyribonuclease (exoA) [Treponema pallidum subsp. pallidum str. Nichols] gi|189017934|gb|ACD70552.1| exodeoxyribonuclease [Treponema pallidum subsp. pallidum SS14] gi|291059544|gb|ADD72279.1| exodeoxyribonuclease III [Treponema pallidum subsp. pallidum str. Chicago] gi|313505256|gb|ADR64396.1| exodeoxyribonuclease III [Treponema pallidum subsp. pallidum] gi|313505276|gb|ADR64415.1| exodeoxyribonuclease III [Treponema pallidum subsp. pallidum str. Mexico A] Length = 264 Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats. Identities = 57/267 (21%), Positives = 100/267 (37%), Gaps = 20/267 (7%) Query: 5 TVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS---------LN 54 + +WNVN IRA + +W+ PD++CLQE K + Sbjct: 6 RIISWNVNGIRAIERKDFLSWLAREAPDVLCLQEIKAHESQLSAALRAPVWSAGAGGTYY 65 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 + + + Y+G A+ SK P + + + N Sbjct: 66 TYFHSAQRPGYSGTALFSKRAPDAVRFFGVPAFDCEGRMLAARFGELTVVSAYFPNAQ-- 123 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 + K+ + F F + + +I GDYNI + D +P E + Sbjct: 124 ----EGGKRLAYKLDFCAAFRAFCDEERTAGQHVILCGDYNIAHKEIDLAHPQENEGNPG 179 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 F + R G+ D+ RA Y++W Y A + ++N G RID+ + + Sbjct: 180 FLPQERAWMDTFTEAGYADSFRAFCTEGQQYTWWSYRARARARNIGWRIDYQCVDQAFLA 239 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261 + S++I ++ G SDH PV ++ Sbjct: 240 RVTSSQILSEVTG----SDHCPVCLTY 262 >gi|57237312|ref|YP_178325.1| exodeoxyribonuclease III [Campylobacter jejuni RM1221] gi|148926400|ref|ZP_01810084.1| exodeoxyribonuclease [Campylobacter jejuni subsp. jejuni CG8486] gi|57166116|gb|AAW34895.1| exodeoxyribonuclease III [Campylobacter jejuni RM1221] gi|145844792|gb|EDK21897.1| exodeoxyribonuclease [Campylobacter jejuni subsp. jejuni CG8486] Length = 259 Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats. Identities = 62/264 (23%), Positives = 98/264 (37%), Gaps = 12/264 (4%) Query: 2 SVVTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 ++ + +WNVN +RA N WI + D I QE K + FP + + H+ Sbjct: 6 KIMKLLSWNVNGLRAICDKNALDWIAQEQIDFIGFQEIKAHEDKFPKKIYEYPFKHMYFN 65 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 K ++S V D + I + N Sbjct: 66 SAKRAGYSGVMSLCNFNSEVKKCEFFDDEEGRVLEHRFKNIALFNIYFPN------GQKD 119 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + + K+ + FL + + L+ +I GD N + D +P N + F R Sbjct: 120 EERLNFKMQFYADFLVYLDKLLKDGFEIIICGDVNTAHKEIDLTHPKANANTSGFLPIER 179 Query: 181 QSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 L +GF D R + + YS+W Y + +N G RID+ +S L +A Sbjct: 180 AWIDDLLKLGFIDTFREINGEIKEKYSWWSYRMKARERNVGWRIDYFFISKGLKDKLKNA 239 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 I G SDH PV + +DI Sbjct: 240 FIRDDIFG----SDHAPVGIEIDI 259 >gi|291612503|ref|YP_003522660.1| exodeoxyribonuclease III Xth [Sideroxydans lithotrophicus ES-1] gi|291582615|gb|ADE10273.1| exodeoxyribonuclease III Xth [Sideroxydans lithotrophicus ES-1] Length = 288 Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats. Identities = 69/291 (23%), Positives = 114/291 (39%), Gaps = 36/291 (12%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETC 60 + + T N+N IR+ L W + DI+C+QE K + + + L L YH Sbjct: 1 MRIITLNLNGIRSAYNKGLLEWFSRQDADILCVQELKAQAADMTADMLSPLGYHGYFHYA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT-INTQTLRIGNLYLPHGNPI 119 +K Y+GV I SK +P ++ L + D + R+IEA F ++ +L + + Sbjct: 61 EKKGYSGVGIYSKRKPDSVIVGLDIPEFDAEGRYIEAQFGNLSVVSLYLPSGSSGEERQA 120 Query: 120 TSTKYDDKISWIKRFLR---------------------------FASQRLELEEPLIFAG 152 K+ + R + Q +I G Sbjct: 121 VKFKFMEAFMPHLRQMMENSKVPVVGESRLLPQTAGSTSNVSQPHMVQLQRSGRDVIVCG 180 Query: 153 DYNIIPQPHDCYNPIIWENDACFTLEVRQS-FQKLQNMGFTDAIRATHDTHHLYSFWDYY 211 D+NI D N + ++ F E R + L +GF D R H Y++W Sbjct: 181 DWNIAHTEKDLRNWRGNKKNSGFLPEERAWLTELLGEVGFVDVFRKLHPELEAYTWWSNR 240 Query: 212 ADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 +W+K+ G RID+ + +P + S I + R SDH P++V Sbjct: 241 GQAWAKDVGWRIDYQIATPGMAAKAVSTGIYKEQR----FSDHAPLMVDYK 287 >gi|253997612|ref|YP_003049676.1| exodeoxyribonuclease III Xth [Methylotenera mobilis JLW8] gi|253984291|gb|ACT49149.1| exodeoxyribonuclease III Xth [Methylotenera mobilis JLW8] Length = 256 Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats. Identities = 69/264 (26%), Positives = 122/264 (46%), Gaps = 15/264 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETC 60 + + + N+N IR+ L AW+K + D+IC+QE K + + + L Y+ Sbjct: 1 MKIISLNLNGIRSATNKGLYAWLKNQDADVICMQELKAQAGDMTEQMLNPEGYYGYFHYA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GV I SK + ++ L +D+D + R++EA F L + +LYLP G+ Sbjct: 61 EKKGYSGVGIYSKTKADSVIEGLGIEDIDSEGRYLEARFG----NLSVVSLYLPSGS-SG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K S ++RF+ ++ ++ GD+NI + D N ++ F E R Sbjct: 116 EERQAFKFSVMERFMPQLHALVQSGRDVVICGDWNIAHKEADLKNWKGNRKNSGFLPEER 175 Query: 181 QSFQK-LQNMGFTDAIRATHDT--HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 + +MG+ D R + Y++W +W+ N G RID+ + +P + Sbjct: 176 AWLTQLFDDMGWVDVYRTLYPDTTDACYTWWSNRGQAWANNVGWRIDYQIATPAFAAKAV 235 Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261 S + R SDH P+I+ Sbjct: 236 STSVYKDER----FSDHAPLIIDY 255 >gi|158317046|ref|YP_001509554.1| exodeoxyribonuclease III Xth [Frankia sp. EAN1pec] gi|158112451|gb|ABW14648.1| exodeoxyribonuclease III Xth [Frankia sp. EAN1pec] Length = 297 Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats. Identities = 78/262 (29%), Positives = 125/262 (47%), Gaps = 6/262 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFP---FETLQSLNYHIETC 60 + +ATWN+NS +AR L W+ +PD++CLQETK D+ F E L Y + Sbjct: 1 MRIATWNINSAKARQPRLIEWLDRASPDVVCLQETKLSDEAFLELFDEDLFRRGYRVAHH 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 G +NGVAILS+ ++ LPGD + + +RI +LY+P+G + Sbjct: 61 GDGRWNGVAILSRAGLEDVRRGLPGDPGFPGPEPRAISASCGG--IRIWSLYVPNGRTVE 118 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 Y K++W+ ++ + GD+NI P D ++ +E T R Sbjct: 119 DPHYAYKLAWLAALRDVVAELAPQGPVM-TLGDFNIAPTDADVWDIAEFEGATHVTEAER 177 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + +L + G D +R +Y++WDY + KN G+RID + + + + + Sbjct: 178 AALGRLHDAGLLDLMRERWPDETVYTYWDYRQLCFPKNYGMRIDLTLATADVAARARAVW 237 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 +D R T SDH PV+V LD Sbjct: 238 VDRAARKGTGTSDHAPVVVDLD 259 >gi|304310166|ref|YP_003809764.1| Exodeoxyribonuclease III [gamma proteobacterium HdN1] gi|301795899|emb|CBL44100.1| Exodeoxyribonuclease III [gamma proteobacterium HdN1] Length = 277 Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats. Identities = 74/262 (28%), Positives = 118/262 (45%), Gaps = 13/262 (4%) Query: 6 VATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC--GQ 62 + + N N IR A WI++ PD++C+QETK + YH + Sbjct: 22 IVSANTNGIRSAASKGFLEWIQKRQPDVVCIQETKAQLHQLDVFITDIPGYHSYFFDAQK 81 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+GVA+ K +P +V L D + R+++ F L + +LYLP G+ Sbjct: 82 KGYSGVAVYCKREPDRVVRGLGFPIADDEGRYLQVDFG----DLSVASLYLPSGSASDEA 137 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + K ++ FL E I GD+NI + D N + ++ F E R Sbjct: 138 -QEKKYRFLDTFLPMMKAWREDGRRYILCGDWNIAHKNIDIKNWRSNQKNSGFLPEERAW 196 Query: 183 FQKLQNMG-FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 ++ + + DA RA + Y++W +W+KN G RID+ ++SPE + S I Sbjct: 197 LDRVFDEQGWVDAFRAVNSEADQYTWWSNRGQAWAKNVGWRIDYQIVSPELRDTISSTEI 256 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 R SDH P+++S DI Sbjct: 257 YKDER----FSDHAPLLMSYDI 274 >gi|309379305|emb|CBX22078.1| unnamed protein product [Neisseria lactamica Y92-1009] Length = 259 Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats. Identities = 64/264 (24%), Positives = 120/264 (45%), Gaps = 13/264 (4%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ + + NVN IR+ +I + DI+C+QE K ++ + + H Sbjct: 1 MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADLSADMKNPHGMHGYWHC 60 Query: 62 --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 ++ Y+GVA+ K +P + + ++ D + RF+ F L + +LYLP G+ Sbjct: 61 AEKRGYSGVAVYGKRKPDNVQIGMGIEEFDREGRFVRCDFG----RLSVISLYLPSGSSA 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K ++ F ++ GD+NI Q D N + ++ F E Sbjct: 117 EERQQV-KYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEE 175 Query: 180 RQSF-QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R+ + + +G+TD R + + Y++W +++K+ G RID+ M++PE + S Sbjct: 176 REWIGKVIHTLGWTDMWRTLYPDNPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVS 235 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 A + K SDH P++V D Sbjct: 236 AHVYKD----EKFSDHAPLVVEYD 255 >gi|325981921|ref|YP_004294323.1| exodeoxyribonuclease III Xth [Nitrosomonas sp. AL212] gi|325531440|gb|ADZ26161.1| exodeoxyribonuclease III Xth [Nitrosomonas sp. AL212] Length = 257 Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats. Identities = 69/263 (26%), Positives = 119/263 (45%), Gaps = 13/263 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + T N+N IRA + W+ + D++C+QE K + + YH Sbjct: 1 MQIITLNLNGIRAAVKKGFLQWLAAQSADVVCVQELKAQLPDLSPAIQSPDGYHGYFHCA 60 Query: 62 -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 Q+ Y+GV I ++ +P +++ + D+D + RF++A F L I ++YLP G+ Sbjct: 61 GQRGYSGVGIYTRKKPDQVIEGIGIADIDAEGRFLQADFG----NLSIISIYLPSGS-SG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K ++++F +I GD+NI + D N + ++ F E R Sbjct: 116 EHRQAAKFYFMEKFFPVLQNLKISNREIILCGDWNIAHKEIDLKNWRSNQKNSGFLPEER 175 Query: 181 QS-FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + L+N GF D R + Y++W +W+KN G RID+ + +P L Sbjct: 176 EWLSNVLENSGFIDVFRRLNAEPDQYTWWSNRGQAWAKNVGWRIDYQIATPAIAQLAQRV 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 I R SDH P+I+ D Sbjct: 236 SIYKDER----FSDHAPLIIDYD 254 >gi|153208660|ref|ZP_01946912.1| exodeoxyribonuclease III [Coxiella burnetii 'MSU Goat Q177'] gi|165919791|ref|ZP_02219534.1| exodeoxyribonuclease III [Coxiella burnetii RSA 334] gi|212218132|ref|YP_002304919.1| exodeoxyribonuclease III [Coxiella burnetii CbuK_Q154] gi|120575846|gb|EAX32470.1| exodeoxyribonuclease III [Coxiella burnetii 'MSU Goat Q177'] gi|165916874|gb|EDR35478.1| exodeoxyribonuclease III [Coxiella burnetii RSA 334] gi|212012394|gb|ACJ19774.1| exodeoxyribonuclease III [Coxiella burnetii CbuK_Q154] Length = 259 Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats. Identities = 62/263 (23%), Positives = 108/263 (41%), Gaps = 13/263 (4%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + T N+N IRA W+K DI+CLQETK + + YH Sbjct: 1 MRIITLNLNGIRAAARRGFFDWLKRQKADIVCLQETKACLEITNGDQFHPKGYHCYYHDA 60 Query: 63 KS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + Y+GV I + +P + T L + D + R+I+A F + Sbjct: 61 EKSGYSGVGIYCREKPDRVTTRLGWEHADKEGRYIQADFGSLSV-----ASLYMPSGTTG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K ++ +++ + + I GD+NI+ + D N + + E R Sbjct: 116 EHRQKIKFDFMDHYMKRLKNIVHSKRSFIICGDWNIVHKEIDIKNFKSNQKHSGCLPEER 175 Query: 181 QS-FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + +G DA R + Y++W +W KN G RID+ +++ + + + S Sbjct: 176 AWLDEVFTKVGLVDAFRVVNQKPDQYTWWSSRGRAWEKNVGWRIDYQVITSDLKNSVKSE 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 RI R SDH P+I+ + Sbjct: 236 RIYKDKR----FSDHAPLIIDYE 254 >gi|116328536|ref|YP_798256.1| exodeoxyribonuclease III [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116331264|ref|YP_800982.1| exodeoxyribonuclease III [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116121280|gb|ABJ79323.1| Exodeoxyribonuclease III [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116124953|gb|ABJ76224.1| Exodeoxyribonuclease III [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 254 Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats. Identities = 64/263 (24%), Positives = 112/263 (42%), Gaps = 12/263 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETC 60 + + + N N IR+ + L+ +I++ PD IC QETK + P + Y + Sbjct: 1 MKLISLNCNGIRSSLGKGLSDYIRDRKPDFICFQETKATQEQIPPSLWEEGGYTPVFHSA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GVA+L K P +I L D + R I + Sbjct: 61 EKKGYSGVAVLYKKPPQKITIGLGDPFFDKEGRSIYLEYPDFALW-----NSYFPSGTTG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K+ ++ F + A++R + + ++ GD NI P D ++P + F E R Sbjct: 116 EVRQAVKMKFLDLFQKEAAKRRKKQPNILLCGDINIAHTPQDIHDPKGNAKSSGFLPEER 175 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + + G+ D R + YS+W + A + +KNKG RID+ ++ E + S Sbjct: 176 EWLTQFLEKGWVDTFRYLYPEKQEYSWWTFRAGARAKNKGWRIDYFFVTAELKKNVKSQS 235 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263 I SDH P+ + + + Sbjct: 236 IYRD----KPLSDHAPLELEIKL 254 >gi|317133644|ref|YP_004092958.1| exodeoxyribonuclease III Xth [Ethanoligenens harbinense YUAN-3] gi|315471623|gb|ADU28227.1| exodeoxyribonuclease III Xth [Ethanoligenens harbinense YUAN-3] Length = 256 Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats. Identities = 61/258 (23%), Positives = 104/258 (40%), Gaps = 13/258 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + A + DI C+QETK + F + + Sbjct: 1 MKLISWNVNGLRACMQKGFADFFNREEADIFCVQETKMHPEQADF-AFDGYQSFWNSAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G A+ ++ P+ + + + + R I + Sbjct: 60 KGYSGTAVFTRVPPLSVRYDMGEPEHTGEGRVITVESEAF-----FLVNVYTPNSQRDLV 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + D ++ W F + L ++P++ GD N+ + D NP ++A FT E RQ Sbjct: 115 RLDYRMRWEDAFRAYLLT-LNRDKPVVVCGDMNVAHREIDIKNPKSNIHNAGFTPEERQK 173 Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 L GF D RA + Y++W Y + +N G RID+ ++S + + I Sbjct: 174 MTDLLEAGFIDTFRALYPEQKDAYTWWSYMRKARERNAGWRIDYFLVSDRLRGQVEDSTI 233 Query: 242 DTKPRGWTKPSDHTPVIV 259 G SDH PV + Sbjct: 234 YADVPG----SDHCPVGL 247 >gi|299538266|ref|ZP_07051551.1| exodeoxyribonuclease [Lysinibacillus fusiformis ZC1] gi|298726468|gb|EFI67058.1| exodeoxyribonuclease [Lysinibacillus fusiformis ZC1] Length = 251 Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats. Identities = 64/260 (24%), Positives = 109/260 (41%), Gaps = 13/260 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN IRA + + + + D C+QETK + ++ + + Sbjct: 1 MKFISWNVNGIRACLGKGFLEFFHQIDADFFCIQETKCQAGQVVLS-IEGYEQYWNYAQK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K+ P+ + + +D + R I + + N+Y P+ + Sbjct: 60 KGYSGTAIFTKHTPLSVKYGVGAEDSQDEGRIITLEYK----NFYLVNVYTPNAQRDLAR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + L Q L ++P+++ GD N+ D N ++ FT E R Sbjct: 116 L--PLRLQWEDRLANYLQELNCQKPVVYCGDLNVAHTEIDLKNAKSNIGNSGFTYEERAK 173 Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F L GF D+ R H Y++W Y +N G RID+ ++S + + SA I Sbjct: 174 FSALLESGFVDSFRYKHPEETDHYTWWSYMNKVRERNIGWRIDYFVVSNQLKEQIESATI 233 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 G SDH P+ + L Sbjct: 234 HPHIMG----SDHCPIELQL 249 >gi|166710372|ref|ZP_02241579.1| exodeoxyribonuclease III [Xanthomonas oryzae pv. oryzicola BLS256] Length = 266 Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats. Identities = 62/273 (22%), Positives = 105/273 (38%), Gaps = 24/273 (8%) Query: 4 VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + ++N N +R A AW + D++C+QETK ++ Y Sbjct: 1 MRIISFNANGLRSAASKGFFAWFAAQDADVLCVQETKAQEHQLAGPDFLPTGYKAWFRDA 60 Query: 62 --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GVAI S+++P E+ T L + D + R+IEA F R + Sbjct: 61 STKKGYSGVAIYSRHEPDEVRTALGWPEFDEEGRYIEARFGN-----RSVVSFYIPSGSS 115 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K ++ + L + GD+NI+ D N + ++ Sbjct: 116 GELRQGYKFQVMQWLRPILDEWLASGRQYVLCGDWNIVRTALDIKNWKSNQKNSGCLPPE 175 Query: 180 RQSFQKLQN-----------MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 R L G+ D+ R H Y++W + + N G RID+ ++ Sbjct: 176 RDWLNGLCADVPEDANAAEGRGWVDSYRVLHPQGQDYTWWSNRGAARTNNVGWRIDYQLV 235 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +P L + I + R SDH P IV Sbjct: 236 TPCLRDTLKACSIYREER----FSDHAPYIVDY 264 >gi|148643539|ref|YP_001274052.1| exodeoxyribonuclease, XthA [Methanobrevibacter smithii ATCC 35061] gi|222444963|ref|ZP_03607478.1| hypothetical protein METSMIALI_00579 [Methanobrevibacter smithii DSM 2375] gi|261350463|ref|ZP_05975880.1| exodeoxyribonuclease III [Methanobrevibacter smithii DSM 2374] gi|148552556|gb|ABQ87684.1| exodeoxyribonuclease, XthA [Methanobrevibacter smithii ATCC 35061] gi|222434528|gb|EEE41693.1| hypothetical protein METSMIALI_00579 [Methanobrevibacter smithii DSM 2375] gi|288861246|gb|EFC93544.1| exodeoxyribonuclease III [Methanobrevibacter smithii DSM 2374] Length = 257 Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats. Identities = 75/267 (28%), Positives = 117/267 (43%), Gaps = 14/267 (5%) Query: 1 MSVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 MSV + +WNVN IRA W N DII QE + + + P + ++ Sbjct: 1 MSV-KLVSWNVNGIRAASKKPEFWDWFNSTNADIINFQEVRATEDSIPEKLTDVAGFNSY 59 Query: 59 TCG--QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 +K Y+GV SK +P +V L + LD + R + ++ + N+Y P+ Sbjct: 60 FNEAEKKGYSGVGTFSKIKPENVVRGLGVEALDREGRVLRLEYS----DFTLFNIYFPNS 115 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + + D KI + L + LI GD NI P D YNP E + + Sbjct: 116 GM-NAKRLDYKIDFCNALLDLLEDLKNQGQNLIITGDVNIAHNPIDVYNPANCEGKSGYL 174 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 +E R+ L GF D R D+ +++W Y + +N G R+D+ ++ E + + Sbjct: 175 IEEREWLDDLLASGFVDTFRMFDDSGDNFTWWSYRTRARDRNAGWRLDYFFVNEEFKNKV 234 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263 SA I G SDH PV + LD+ Sbjct: 235 KSATIKNDVFG----SDHCPVTLELDL 257 >gi|269213939|ref|ZP_05983198.2| exodeoxyribonuclease III [Neisseria cinerea ATCC 14685] gi|269144958|gb|EEZ71376.1| exodeoxyribonuclease III [Neisseria cinerea ATCC 14685] Length = 274 Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats. Identities = 64/264 (24%), Positives = 117/264 (44%), Gaps = 13/264 (4%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ + + NVN IR+ +I + DI+C+QE K ++ + + H Sbjct: 16 MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADLSADMKNPHGMHGHWHC 75 Query: 62 --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 ++ Y+GVA+ SK P + + ++ D + RF+ F L + +LYLP G+ Sbjct: 76 AEKRGYSGVAVYSKRAPDNVQIGMGIEEFDREGRFVRCDFG----KLSVISLYLPSGSSA 131 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + F ++ GD+NI Q D N + ++ F E Sbjct: 132 EERQQVKYRFLDV-FYPMLEAMKNEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEE 190 Query: 180 RQSF-QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R+ + + +G+TD R + + Y++W +++K+ G RID+ M++PE + S Sbjct: 191 REWIGKVIHKLGWTDMWRTLYPDNPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVS 250 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 A + K SDH P++V D Sbjct: 251 AHVYKD----EKFSDHAPLVVEYD 270 >gi|330834656|ref|YP_004409384.1| exodeoxyribonuclease III Xth [Metallosphaera cuprina Ar-4] gi|329566795|gb|AEB94900.1| exodeoxyribonuclease III Xth [Metallosphaera cuprina Ar-4] Length = 256 Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats. Identities = 69/259 (26%), Positives = 101/259 (38%), Gaps = 13/259 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVNS+++ I L IK D++ QE KT P + QSL Y Sbjct: 8 LKILSWNVNSLKSAIAKGLMEIIKSEEYDVLMFQEIKTN--QLPLD-FQSLPYRAYINPS 64 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K G + IE ++ G + T I + G + Sbjct: 65 KQKRGYSGTLTLTRIEPISVTYGIGKEEFDVEGRVISTEFKSMFVINVYFPNAGEGLKRL 124 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + ++ F L +P + GD+N+ + D P N A FT E R+ Sbjct: 125 DF-----KLRFNRAFQEYVASLGKPSVICGDFNVAHEEIDIARPKDNVNHAGFTPEERKW 179 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F + GF D R YS+W Y + KN G RID+ ++S E S + A I Sbjct: 180 FHEFLLSGFVDTFRLFVKEPGHYSWWSYRFHAREKNIGWRIDYCVVSKELESKVKKAEIL 239 Query: 243 TKPRGWTKPSDHTPVIVSL 261 K G SDH PV V + Sbjct: 240 EKVMG----SDHAPVTVEI 254 >gi|205356520|ref|ZP_03223283.1| exodeoxyribonuclease [Campylobacter jejuni subsp. jejuni CG8421] gi|205345525|gb|EDZ32165.1| exodeoxyribonuclease [Campylobacter jejuni subsp. jejuni CG8421] Length = 259 Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats. Identities = 62/264 (23%), Positives = 98/264 (37%), Gaps = 12/264 (4%) Query: 2 SVVTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 ++ + +WNVN +RA N WI + D I QE K + FP + + H+ Sbjct: 6 KIMKLLSWNVNGLRAICDKNALDWIAQEQIDFIGFQEIKAHEDKFPKKIYEYPFKHMYFN 65 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 K ++S V D + I + N Sbjct: 66 SAKRAGYSGVMSLCNFNSEVKKCEFFDDEEGRVLEHRFKNIALFNIYFPN------GQKD 119 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + + K+ + FL + + L+ +I GD N + D +P N + F R Sbjct: 120 EERLNFKMKFYADFLVYLDKLLKDGFEIIICGDVNTAHKEIDLTHPKANANTSGFLPIER 179 Query: 181 QSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 L +GF D R + + YS+W Y + +N G RID+ +S L +A Sbjct: 180 AWIDDLLKLGFIDTFREINGEIKEKYSWWSYRMKARERNVGWRIDYFFISKGLKDKLKNA 239 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 I G SDH PV + +DI Sbjct: 240 FIRDDIFG----SDHAPVGIEIDI 259 >gi|300776438|ref|ZP_07086296.1| exodeoxyribonuclease III [Chryseobacterium gleum ATCC 35910] gi|300501948|gb|EFK33088.1| exodeoxyribonuclease III [Chryseobacterium gleum ATCC 35910] Length = 254 Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats. Identities = 75/264 (28%), Positives = 120/264 (45%), Gaps = 14/264 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC-- 60 + + T+NVN IRA + W+K +PDIIC+QE+K + E+L+ L YH Sbjct: 1 MRLITYNVNGIRAAFTKDFLGWLKTADPDIICIQESKAGNDQIDIESLEKLGYHSYWHSA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GV I SK +P + + D + R I A F + + + + Sbjct: 61 VRKGYSGVGIASKIKPNHVEFGCGIESYDNEGRIIRADFDGYS------AISVYVPSASN 114 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + D K+ + FL + + LI +GD+NI + D +NP+ +N + F R Sbjct: 115 IERLDFKMQFCYDFLEYIKNLKKEIPNLIISGDFNICHEAIDIHNPVGLKNVSGFLPMER 174 Query: 181 QSFQKLQNMGF-TDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + N D+ R ++ Y++W Y +S +NKG R+D+ S L A Sbjct: 175 EWMTNFINECELIDSFRFFNNEPDNYTWWSYRQNSRERNKGWRLDYNFTSYSLKDKLSRA 234 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 I + SDH P +V LDI Sbjct: 235 VILKEA----VHSDHCPALVELDI 254 >gi|154175230|ref|YP_001407411.1| exodeoxyribonuclease III [Campylobacter curvus 525.92] gi|112802161|gb|EAT99505.1| exodeoxyribonuclease III [Campylobacter curvus 525.92] Length = 252 Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats. Identities = 61/262 (23%), Positives = 100/262 (38%), Gaps = 12/262 (4%) Query: 4 VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + AW+ PD + LQE K ++ + P E Y + Sbjct: 1 MKLISWNVNGLRAVAAKDGFAWVSGLKPDFLGLQEIKVKEADVPSEI-----YKLGFNEI 55 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 + V + + + N+Y P+G Sbjct: 56 SVNSAVRAGYSGVMSLSKFNTATQKSLFFNDDEGRVLEHRFGNVALFNIYFPNGQ-KDDA 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + K+ + +FL + + +IF GD N + D NP + F R Sbjct: 115 RLAYKMDFYAKFLAYIDALVAQGLDVIFCGDVNTAHREIDLKNPKANAKTSGFLPIERAW 174 Query: 183 FQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 ++ GF D R H D YS+W Y ++ +KN G RID+ +S + L A I Sbjct: 175 LDEVVAHGFIDTFRQAHGDVADAYSWWSYRFNARAKNVGWRIDYFFISQSLKNRLKDAFI 234 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 G SDH PV + +++ Sbjct: 235 LDNIGG----SDHCPVGIEIEL 252 >gi|329120764|ref|ZP_08249426.1| exodeoxyribonuclease III [Neisseria bacilliformis ATCC BAA-1200] gi|327460561|gb|EGF06897.1| exodeoxyribonuclease III [Neisseria bacilliformis ATCC BAA-1200] Length = 258 Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats. Identities = 65/264 (24%), Positives = 119/264 (45%), Gaps = 13/264 (4%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59 ++ + + NVN IR+ +I + DI+C+QE K ++ + E H Sbjct: 1 MLKIVSANVNGIRSAYKKGFLDYIAASGADIVCVQELKAQEADLAPEMKNPHGMYGHWHC 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 ++ Y+GVA+ SK P + + ++ D + RF+ F L + +LYLP G+ Sbjct: 61 AEKRGYSGVAVYSKRAPDRVQVGMGVEEFDREGRFVRCDFG----NLSVISLYLPSGSSA 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + F + ++ GD+NI Q D N + ++ F E Sbjct: 117 EERQQAKFRFLDV-FYPMLADLKAEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEE 175 Query: 180 RQSF-QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R+ + + ++G+TD R + H Y++W +++K+ G RID+ M++PE + + Sbjct: 176 REWIGKVINDLGWTDIWRTLYPDHPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKALN 235 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 A + K SDH P++V D Sbjct: 236 AHVYKD----EKFSDHAPLVVEYD 255 >gi|42524876|ref|NP_970256.1| exodeoxyribonuclease III [Bdellovibrio bacteriovorus HD100] gi|39577087|emb|CAE78316.1| Exodeoxyribonuclease III [Bdellovibrio bacteriovorus HD100] Length = 285 Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats. Identities = 73/265 (27%), Positives = 114/265 (43%), Gaps = 13/265 (4%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC- 60 V + +WNVN IRA L ++ PDI C+QETK E + H Sbjct: 30 TVKIISWNVNGIRACHKKGLLDFVNREKPDIFCIQETKAHIDQVENELKKLTWNHSYWSS 89 Query: 61 -GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GVA +P + + + + R I + + N+Y P+G Sbjct: 90 AVKKGYSGVATFVNEEPKSVEYGWGISEYESEGRIIISDHG----PFDLYNIYFPNGGSG 145 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K ++K ++L ++ GDYN+ + D ++P+ + F E Sbjct: 146 DVRH-NFKQQFLKDLNHHLKEKLATGRQVVVVGDYNVAHEAIDVHDPVRLSKVSGFFPEE 204 Query: 180 RQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R F ++GF D R + YS+WDY + N+G RID+I +S L S Sbjct: 205 RAWFDSFVDLGFIDTFRYFKPSEAKRYSWWDYRQMARISNRGWRIDYICVSKGLEKYLAS 264 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263 A I + G SDH PV+ +LDI Sbjct: 265 ADILDQVEG----SDHCPVVATLDI 285 >gi|318062091|ref|ZP_07980812.1| exodeoxyribonuclease III [Streptomyces sp. SA3_actG] gi|318079946|ref|ZP_07987278.1| exodeoxyribonuclease III [Streptomyces sp. SA3_actF] Length = 261 Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats. Identities = 54/261 (20%), Positives = 94/261 (36%), Gaps = 8/261 (3%) Query: 10 NVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG--QKSYN 66 NVN +RA W+ + D++CLQE + E P E + + K Sbjct: 2 NVNGLRAAAKKGFTEWLAGTSADVLCLQEVRAEAHQLPEEVARPEGWFSLHAPAADKGRA 61 Query: 67 GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDD 126 GV++ ++ +P + T + D R++EA T + G KY Sbjct: 62 GVSLYTRREPDRVRTGFGSAEFDGSGRYVEADLPGVTVA-SLYLPSGEVGTERQEQKYRF 120 Query: 127 KISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL 186 ++ + ++ GD+NI D N +A F E R+ ++ Sbjct: 121 MDEFLTYLKELRERAAAEGREVLVCGDWNIAHTEADLKNWRGNRKNAGFLPEEREWLSRV 180 Query: 187 QN----MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 + YS+W Y ++ + G RID+ M S A ++ Sbjct: 181 LDPADGGYVDVVRAQHAGVEGPYSWWSYRGRAFDNDTGWRIDYHMASAGLAGRALKAEVE 240 Query: 243 TKPRGWTKPSDHTPVIVSLDI 263 + SDH PV V+ ++ Sbjct: 241 RAATHEERWSDHAPVTVTYEM 261 >gi|78486391|ref|YP_392316.1| exonuclease III [Thiomicrospira crunogena XCL-2] gi|78364677|gb|ABB42642.1| Exodeoxyribonuclease III [Thiomicrospira crunogena XCL-2] Length = 273 Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats. Identities = 69/272 (25%), Positives = 115/272 (42%), Gaps = 13/272 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++NVNS+R R+H L A PDII LQETK +D FP ++++ YH GQK Sbjct: 1 MKIVSFNVNSVRMRLHQLQALTDSYAPDIIGLQETKVQDHEFPLADIEAMGYHAIYMGQK 60 Query: 64 SYNGVAI---LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 ++ GVAI S + + + +R+ N Y P G + Sbjct: 61 THYGVAILYKKSLVLKASQYGWSHDGEDAQKRIIMADFEDQKGNDVRVINGYFPQGENRS 120 Query: 121 STK-YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDA 173 + K ++ + + + + E+ L+ GD+NI P+ + + Sbjct: 121 HPIKFPAKEAFYQDLMTYLKEECSPEQNLVVIGDFNISPEDKDIGIGEPNRKRWLRDGKT 180 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHL-YSFWDYYADSW--SKNKGIRIDHIMLSP 230 F E R+ + L G D R H +S++DY + + +G+RID ++ + Sbjct: 181 SFLPEEREWWATLIGWGLKDTYRKVHPEEDRIFSWFDYRSKGFDAEPKRGLRIDTVLATK 240 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 T + + RG KPSDH PV Sbjct: 241 CLTEKAVDSGVAYDIRGMVKPSDHAPVWTEFK 272 >gi|221194898|ref|ZP_03567954.1| exodeoxyribonuclease III [Atopobium rimae ATCC 49626] gi|221184801|gb|EEE17192.1| exodeoxyribonuclease III [Atopobium rimae ATCC 49626] Length = 281 Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats. Identities = 70/263 (26%), Positives = 114/263 (43%), Gaps = 15/263 (5%) Query: 5 TVATWNVNSIRARIHN---LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 A+WNVN +RA + + + DI LQETK ++ + + S Sbjct: 30 KFASWNVNGLRAVLKKDPSFTEIFETIDADIFALQETKLQEGQVDLD-IPSYFQTWNYAE 88 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G A+ S+ +P++++ + D + R F R + + N Sbjct: 89 RKGYSGTAVFSREEPLQVIRQIGSPVADNEGRVCALEFD------RFWFVDVYTPNSKEQ 142 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 D+ R L ++PLI GD+N+ D NP +A F+ E R+ Sbjct: 143 LARLDERLVWDERYRDFIAELSAQKPLITCGDFNVAHTEIDLKNPSSNHKNAGFSDEERE 202 Query: 182 SFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 SF KL + GFTD R H YS+W Y ++ N G RID+ ++S + A Sbjct: 203 SFTKLLDAGFTDTFRYRHPDVTGAYSWWSYRFNARKNNAGWRIDYFLVSNRIAQQITGAA 262 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263 I + G SDH PV +++++ Sbjct: 263 ILNEVYG----SDHCPVELTIEL 281 >gi|189485031|ref|YP_001955972.1| exodeoxyribonuclease III [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|170286990|dbj|BAG13511.1| exodeoxyribonuclease III [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 251 Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats. Identities = 78/260 (30%), Positives = 121/260 (46%), Gaps = 14/260 (5%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC-- 60 + + +WNVN IRA + AW K+ N DI+C+QETK + FP + + Y+ Sbjct: 1 MKIVSWNVNGIRAIYKKDFTAWFKDENADIVCVQETKAGETQFPKDIKEINGYNFYCSSA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GVA+ SK +P ++ + D + R I F I N+Y P+G + Sbjct: 61 EKKGYSGVAVWSKIKPDFVIASIENKVFDNEGRIIRLDFK----DFIIFNVYFPNGG-AS 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K+ + +++ Q ++ +I GDYN D P E + F E R Sbjct: 116 QERLKYKMEFYDYLIKYLKQFK--DKTVIICGDYNTAHFSIDLARPKENEKVSGFMPEER 173 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + L + GF D R + Y++WDY + S+N G RIDH +S + L SA Sbjct: 174 EKLDNLVSSGFIDTFRYFNKEPGNYTWWDYKTAARSRNIGWRIDHFFMSQHSVKRLKSAD 233 Query: 241 IDTKPRGWTKPSDHTPVIVS 260 I G SDH PV ++ Sbjct: 234 IKKSVSG----SDHCPVSIT 249 >gi|139439406|ref|ZP_01772847.1| Hypothetical protein COLAER_01867 [Collinsella aerofaciens ATCC 25986] gi|133775185|gb|EBA39005.1| Hypothetical protein COLAER_01867 [Collinsella aerofaciens ATCC 25986] Length = 272 Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats. Identities = 68/272 (25%), Positives = 115/272 (42%), Gaps = 18/272 (6%) Query: 5 TVATWNVNSIRARIHN---LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 T A+WNVN +RA + +E + DI+ LQETK ++ + L + Sbjct: 6 TFASWNVNGLRAVLKKDPSFIQIAQELDVDILALQETKLQEGQVDID-LPGYHQTWSYAE 64 Query: 62 QKSYNGVAILSKYQPIEIVT---------HLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 +K Y+G A+ S+ +P+ ++ L QA + ++Y Sbjct: 65 RKGYSGTAVFSRQEPLRVLRADALLPYAGGGEAAVLVAQAATEGRVCALEFDKFWFVDVY 124 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 P+ + + E +P++ GD+N+ + D NP + Sbjct: 125 TPNAQNELARIDVRMAWDDAYRGFLNALERETGKPVVTCGDFNVAHEEIDLKNPKSNRGN 184 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 A F+ E R F +L N GFTD RA + +YS+W Y ++ N G RID+ ++S Sbjct: 185 AGFSDEERGKFTELLNAGFTDTWRAANPDVEGVYSWWSYRFNARKNNAGWRIDYFLVSDS 244 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + + I RG SDH PV ++L++ Sbjct: 245 IAANVRDTGI----RGDIFGSDHCPVTLTLEL 272 >gi|121613613|ref|YP_999970.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni 81-176] gi|121504268|gb|EAQ73304.2| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni 81-176] Length = 259 Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats. Identities = 62/264 (23%), Positives = 98/264 (37%), Gaps = 12/264 (4%) Query: 2 SVVTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 ++ + +WNVN +RA N WI + D I QE K + FP + + H+ Sbjct: 6 KIMKLLSWNVNGLRAICDKNALDWIAQEKIDFIGFQEIKAHEDKFPKKIYEYPFKHMYFN 65 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 K ++S V D + I + N Sbjct: 66 SAKRAGYSGVMSLCNFDSEVKKCEFFDDEEGRVLEHRFKNIALFNIYFPN------GQKD 119 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + + K+ + FL + + L+ +I GD N + D +P N + F R Sbjct: 120 EERLNFKMKFYADFLVYLDKLLKDGFEIIICGDVNTAHKEIDLTHPKANANTSGFLPIER 179 Query: 181 QSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 L +GF D R + + YS+W Y + +N G RID+ +S L +A Sbjct: 180 AWIDDLLKLGFIDTFREINGEIKEKYSWWSYRMKARERNVGWRIDYFFISKGLKDKLKNA 239 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 I G SDH PV + +DI Sbjct: 240 FIRDDIFG----SDHAPVGIEIDI 259 >gi|324998398|ref|ZP_08119510.1| exodeoxyribonuclease III Xth [Pseudonocardia sp. P1] Length = 287 Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats. Identities = 76/265 (28%), Positives = 128/265 (48%), Gaps = 8/265 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFE---TLQSLNYHIETC 60 + +ATWNVNS ++R+ L W+ E +PD++CLQETK D +F L + Y + Sbjct: 1 MRLATWNVNSAKSRLPRLLPWLDERDPDVVCLQETKLSDDDFAATFDDELAARGYAVAHH 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT---FTINTQTLRIGNLYLPHGN 117 GQ +NGVA+LS+ ++V LPG+ + + T LR+ ++Y+P+G Sbjct: 61 GQGRWNGVAVLSRVGLDDVVRGLPGEPVFSEGGLDVPDARAVTATCGGLRVTSVYVPNGR 120 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + Y K+ W+ + AGD NI P D ++ ++ T Sbjct: 121 EPSDPHYAYKLRWLAA--LRDQVVAGDPATTVVAGDVNIAPTDDDVWDRSQFDGATHVTP 178 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 R++ L G D +R ++++WDY A + +++G+RID ++ + Sbjct: 179 AEREALAGLVGAGLHDVLRDRWPDERVFTYWDYRAGRFHQDQGMRIDLVLAGEDPAGRRA 238 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLD 262 + +D K R PSDH PV++ LD Sbjct: 239 AVWVDRKARKGRSPSDHAPVVLDLD 263 >gi|238028924|ref|YP_002913155.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia glumae BGR1] gi|237878118|gb|ACR30451.1| Endonuclease/exonuclease/phosphatase family protein [Burkholderia glumae BGR1] Length = 256 Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats. Identities = 60/264 (22%), Positives = 107/264 (40%), Gaps = 14/264 (5%) Query: 3 VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59 ++ V T N+N IR A W+ + D +C+QE K + P E + + Sbjct: 1 MLRVITANLNGIRSAAKKGFFDWLGDQQADCVCVQEIKVSADDLPAEFAAPHGFTGYFHH 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G + ++ +P +++ + D + R++EA F L + ++Y+P G+ Sbjct: 61 AQKKGYSGAGLYTRREPDDVIIGYGSSEFDAEGRYVEARFG----KLSVVSVYVPSGSSG 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + L+ +I GD NI+ + D N + ++ E Sbjct: 117 DERQQA--KYRFMNEFMPHLAELKATREVIVCGDVNIVHKEIDIRNWKSNQKNSGCLPEE 174 Query: 180 RQSFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R KL + G+ D R Y++W +++KN G RID+ + +P Sbjct: 175 RAWLTKLFDEVGYVDVFRTLDPRPDQYTWWSNRGQAYAKNVGWRIDYQIATPGVAGTAKQ 234 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 I K SDH P+ V D Sbjct: 235 TSIFRDI----KFSDHAPLTVDYD 254 >gi|224438361|ref|ZP_03659288.1| exodeoxyribonuclease LexA [Helicobacter cinaedi CCUG 18818] gi|313144803|ref|ZP_07806996.1| exodeoxyribonuclease LexA [Helicobacter cinaedi CCUG 18818] gi|313129834|gb|EFR47451.1| exodeoxyribonuclease LexA [Helicobacter cinaedi CCUG 18818] Length = 251 Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats. Identities = 72/262 (27%), Positives = 118/262 (45%), Gaps = 13/262 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + E N DI C+QE+K + F Q + + + + Sbjct: 1 MKLISWNVNGLRACMNKGFMDFFNEVNADIFCIQESKMQKDQGDFS-FQGYSEYWNSAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+GV +LSK +P+++ + D + R I A + R + + N Sbjct: 60 KGYSGVVVLSKIKPLQVTYDMGISHHDKEGRIITAEYE------RFYLVNVYTPNAKREL 113 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + + R ++L+ +P++ GD N+ + D NP +A FT E R Sbjct: 114 ERLEYRMEWEDDFRAFVKKLKKHKPVVICGDLNVAHKEIDLKNPKTNRRNAGFTDEERGK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +L GF D R + T YS+W Y + N G RID+ + S S L A+I Sbjct: 174 MSELLESGFIDTFRHFYPTLEGAYSWWSYMGKARENNTGWRIDYFLCSTSLESHLKDAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 G SDH PV +S+D+ Sbjct: 234 YPHIFG----SDHCPVGLSMDM 251 >gi|88703392|ref|ZP_01101108.1| Exodeoxyribonuclease III [Congregibacter litoralis KT71] gi|88702106|gb|EAQ99209.1| Exodeoxyribonuclease III [Congregibacter litoralis KT71] Length = 266 Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats. Identities = 66/267 (24%), Positives = 119/267 (44%), Gaps = 13/267 (4%) Query: 1 MSVVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 +S + ++N N IRA W+ NPD++C+QETK + E YH Sbjct: 5 LSTARIVSFNANGIRAASRKGFFDWMARFNPDVVCVQETKAQAHQLTDEVFHPRGYHCIY 64 Query: 60 CG--QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 +K Y+G A+ S+ +P + T L + +D + R+++ F L + +LY+P G+ Sbjct: 65 NDAVKKGYSGTAVYSRVKPRAVTTQLGWEPVDSEGRYLQCDFDG----LSVISLYVPSGS 120 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + + K ++++ F I D+N Q D N + ++ F Sbjct: 121 SSDAA-LEKKFTFMELFYEHLRALKRKRRDFIICADWNTCHQNIDLRNWKPNQKNSGFLP 179 Query: 178 EVRQSFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 E R ++ + GF D+ R Y++W +W+ N G R+D+ M++P+ + Sbjct: 180 EERAWLDRIYDEIGFVDSFRVIDKEPDRYTWWSNRGQAWANNVGWRLDYQMITPKLVPAV 239 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263 +A I T R SDH P ++ + Sbjct: 240 RAASIYTDER----FSDHAPQVMEYAL 262 >gi|312140778|ref|YP_004008114.1| exodeoxyribonuclease iii [Rhodococcus equi 103S] gi|325675582|ref|ZP_08155266.1| exodeoxyribonuclease III [Rhodococcus equi ATCC 33707] gi|311890117|emb|CBH49435.1| exodeoxyribonuclease III [Rhodococcus equi 103S] gi|325553553|gb|EGD23231.1| exodeoxyribonuclease III [Rhodococcus equi ATCC 33707] Length = 275 Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats. Identities = 69/266 (25%), Positives = 106/266 (39%), Gaps = 14/266 (5%) Query: 6 VATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL--NYHIETCGQ 62 + T NVN +RA L W+ + D++CLQET+ DK +L +H+ + Sbjct: 13 ITTVNVNGVRAAARKGLIDWLAGSQADVVCLQETRASDKQLHETLAPALDQGWHVASAEP 72 Query: 63 --KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 K NGVA+LS+ + D+ R+IEA F L +G+LYLP G T Sbjct: 73 SAKGRNGVAVLSRRPADAVRIGFGDDEFADAGRYIEADFDA----LTVGSLYLPTGEAET 128 Query: 121 STKYD---DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + S+ A + ++ GD+NI D N + F Sbjct: 129 PKQEQKERFMASFAAHLSASAEAAVAAGRDVLVCGDWNIAHTERDIKNWKGNVKKSGFLP 188 Query: 178 EVRQSFQKLQNMGFTDAIRA--THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 R L G + D YS+W Y ++ + G RID+ + +P + Sbjct: 189 GERDWVGALLAGGAWVDVVRELHPDVDGPYSWWSYRGKAFDTDAGWRIDYHLTTPGLAAR 248 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 AR++ + SDH PV V Sbjct: 249 AKEARVERAATYAERWSDHAPVTVQF 274 >gi|261365939|ref|ZP_05978822.1| exodeoxyribonuclease III [Neisseria mucosa ATCC 25996] gi|288565482|gb|EFC87042.1| exodeoxyribonuclease III [Neisseria mucosa ATCC 25996] Length = 259 Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats. Identities = 60/264 (22%), Positives = 112/264 (42%), Gaps = 13/264 (4%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ + + NVN IR+ +I + DI+C+QE K ++ + E H Sbjct: 1 MLKIISANVNGIRSAYKKGFYEYIATSGADIVCVQELKAQEADLSDEMKNPHGMHGHWHC 60 Query: 62 --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 ++ Y+GVA+ SK P + + ++ D + RF+ F + Sbjct: 61 AEKRGYSGVAVYSKRAPDNVQIGMGIEEFDREGRFVRCDFGKLSVI-----SLYLPSGTS 115 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + + K ++ F ++ GD+NI Q D N + ++ F E Sbjct: 116 APERQELKYRFLDAFYPMLEAMKAEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEE 175 Query: 180 RQSF-QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R+ + + +G+TD R + + Y++W +++K+ G RID+ M++PE S Sbjct: 176 REWIGKVIHTLGWTDMWRTLYPDNPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAVKAVS 235 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 A + K SDH P++V D Sbjct: 236 AHVYKD----EKFSDHAPLVVEYD 255 >gi|330429606|gb|AEC20940.1| catabolite repression control protein [Pusillimonas sp. T7-7] Length = 260 Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats. Identities = 68/267 (25%), Positives = 125/267 (46%), Gaps = 15/267 (5%) Query: 3 VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IET 59 ++ V + N+N IR A W+ + N D IC+QE K + N + L Y+ Sbjct: 1 MLRVISANLNGIRSAVRKGFLDWVPQQNADFICMQELKAQADNMTADMLNPEGYYGYFHY 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GV + ++ QP++++ L ++D + R++E + L + ++YLP G+ Sbjct: 61 AEKKGYSGVGLYARQQPLQVIQGLGVPEIDAEGRYLELVYD----KLSVISVYLPSGS-S 115 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K +++ F + S+ + ++ GD+NI Q D N ++ F E Sbjct: 116 GDHRQAAKFVFMEHFFKHLSELAQCGRQVVLCGDWNIAHQEIDLKNWKGNLKNSGFLPEE 175 Query: 180 RQSFQKLQNM-GFTDAIRATHDT--HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 R ++ + G+ D R+ + Y++W +W+KN G RID+ + SPE + Sbjct: 176 RAWLTRVFDEIGWVDVYRSLYPDATGEAYTWWSNRGQAWAKNVGWRIDYQIASPEIAATA 235 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263 +A I R SDH P+ + D Sbjct: 236 KTASIYKDER----FSDHAPLTIDYDW 258 >gi|319785778|ref|YP_004145253.1| exodeoxyribonuclease III Xth [Pseudoxanthomonas suwonensis 11-1] gi|317464290|gb|ADV26022.1| exodeoxyribonuclease III Xth [Pseudoxanthomonas suwonensis 11-1] Length = 270 Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats. Identities = 66/275 (24%), Positives = 114/275 (41%), Gaps = 25/275 (9%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + ++N N IR+ W+ + + D++CLQETK+++ + +H Sbjct: 1 MRIISFNANGIRSASSKGFFDWLGQQDADVVCLQETKSQEHQLADACFRPDGHHCFYRDA 60 Query: 62 --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GVAI ++ +P E+ T L D D + R+IEA F L + + Y+P G+ Sbjct: 61 TTKKGYSGVAIYARREPDEVRTVLGRPDFDDEGRYIEARFG----NLSVVSFYIPSGS-S 115 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K ++ + L + GD+NI+ D N + ++ Sbjct: 116 GELRQGYKFQIMEWLKPVLDEWLASGREYVLCGDWNIVRCRKDIRNWTSNQKNSGCLPPE 175 Query: 180 RQSFQKLQN------------MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227 R + G+ DA RA H Y++W + + N G RID+ Sbjct: 176 RAWLNGMIGPDEGSDGTPPRPGGWVDAYRALHPQGEDYTWWSNRGAARANNVGWRIDYQF 235 Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 ++P S L I + R SDH P V + Sbjct: 236 VTPGLGSRLRGCSIYREQR----FSDHAPFTVDYE 266 >gi|261416712|ref|YP_003250395.1| exodeoxyribonuclease III Xth [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373168|gb|ACX75913.1| exodeoxyribonuclease III Xth [Fibrobacter succinogenes subsp. succinogenes S85] gi|302325662|gb|ADL24863.1| exodeoxyribonuclease III [Fibrobacter succinogenes subsp. succinogenes S85] Length = 265 Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats. Identities = 67/269 (24%), Positives = 107/269 (39%), Gaps = 15/269 (5%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN IR+ + W +PDI+CLQE + E E Y+ Sbjct: 1 MKIYSWNVNGIRSVLKKGFEDWFSATDPDILCLQEVRAEKNQV-SEIATREGYYTYWNAC 59 Query: 63 KS---YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 K Y+GVA+ SK +P + ++ D + R ++ F + N Sbjct: 60 KRKKGYSGVAVYSKIEPDAVNYGFDIEEFDEEGRVLQLVFPDW-----VLNCIYFPNGGQ 114 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + D K+ + FL + Q L + ++ GDYN + D P EN + F Sbjct: 115 GDDRLDYKLRFYDAFLENSKQWLADGKHVVTVGDYNTCHKEIDIARPKENENVSGFLPIE 174 Query: 180 RQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R K GF D R H YS+W + +N G R+D+ + + S Sbjct: 175 RAWMDKYVENGFVDTFRTLHPDTRDAYSWWSNRFGARERNVGWRLDYGFVDAALMPNVVS 234 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIPEPR 267 + I + G SDH P+ + L+ P Sbjct: 235 SEILSNVMG----SDHCPISLELEPPFAP 259 >gi|300313958|ref|YP_003778050.1| exodeoxyribonuclease III protein [Herbaspirillum seropedicae SmR1] gi|300076743|gb|ADJ66142.1| exodeoxyribonuclease III protein [Herbaspirillum seropedicae SmR1] Length = 258 Score = 175 bits (444), Expect = 5e-42, Method: Composition-based stats. Identities = 64/263 (24%), Positives = 114/263 (43%), Gaps = 15/263 (5%) Query: 5 TVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETCG 61 + + N+N IR A W+++ PD +C+QE K + + + L Y H Sbjct: 3 KIVSANLNGIRSAAKKGFFEWLQKEAPDFVCVQELKAQAADMTEQFLAPAGYVGHFHYAQ 62 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+GV + S+ QP + + D + R++E + L + +LY P G+ Sbjct: 63 KKGYSGVGVYSRRQPDSVRIGFGNTEFDDEGRYVECDYG----DLTVISLYAPSGSSSEE 118 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + K +++ FL + + ++ GD+NI + D N + ++ F E R Sbjct: 119 R-QEAKFRFMEAFLPHLMELEKSGREVVICGDWNIAHKEIDLKNWKSNQKNSGFLPEERA 177 Query: 182 SFQKLQNM-GFTDAIRATHDTH--HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 ++ + G D R H Y++W +W+ N G RID+ + +P + S Sbjct: 178 WMTRIFDQLGLVDVYRRLHPETTGEAYTWWSNRGQAWANNVGWRIDYHVSTPGIAAKAVS 237 Query: 239 ARIDTKPRGWTKPSDHTPVIVSL 261 A I + R SDH P+ V Sbjct: 238 AAIYKEQR----FSDHAPLTVVY 256 >gi|255036745|ref|YP_003087366.1| exodeoxyribonuclease III Xth [Dyadobacter fermentans DSM 18053] gi|254949501|gb|ACT94201.1| exodeoxyribonuclease III Xth [Dyadobacter fermentans DSM 18053] Length = 254 Score = 175 bits (444), Expect = 6e-42, Method: Composition-based stats. Identities = 72/262 (27%), Positives = 113/262 (43%), Gaps = 13/262 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH---IET 59 + + T+N+N IRA + L W++ DI+C QE K ++L Y Sbjct: 1 MQILTYNLNGIRAALKNGLLDWLQTTPADILCFQEVKATPDVVDLSGFRALGYELAGWHA 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GVAI SK QP +V D + R + A F T Sbjct: 61 AEKKGYSGVAIFSKIQPDRVVMGCDIPAYDAEGRVLRADFGDLTV-----LNCYFPSGTS 115 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K+ ++ FL + ++ + LI GDYNI D ++P+ + + F E Sbjct: 116 GDVRQSVKMRFLTDFLVWVNELRKERPNLIICGDYNIAHTEIDIHDPVRNQKSSGFLPEE 175 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R + + G+TDA R + T YS+W Y A + NKG RID+I +S + ++ Sbjct: 176 RAWMTEWFSNGYTDAFRFMNPTLRQYSWWTYRAGARGNNKGWRIDYISVSEPLKFRIIAS 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261 R SDH PV + + Sbjct: 236 RQYNDA----VHSDHCPVWLEI 253 >gi|62290851|ref|YP_222644.1| exodeoxyribonuclease III [Brucella abortus bv. 1 str. 9-941] gi|82700763|ref|YP_415337.1| AP endonuclease [Brucella melitensis biovar Abortus 2308] gi|225853439|ref|YP_002733672.1| exodeoxyribonuclease III [Brucella melitensis ATCC 23457] gi|254690141|ref|ZP_05153395.1| Exodeoxyribonuclease III [Brucella abortus bv. 6 str. 870] gi|254694631|ref|ZP_05156459.1| Exodeoxyribonuclease III [Brucella abortus bv. 3 str. Tulya] gi|254696256|ref|ZP_05158084.1| Exodeoxyribonuclease III [Brucella abortus bv. 2 str. 86/8/59] gi|254707472|ref|ZP_05169300.1| Exodeoxyribonuclease III [Brucella pinnipedialis M163/99/10] gi|254731174|ref|ZP_05189752.1| Exodeoxyribonuclease III [Brucella abortus bv. 4 str. 292] gi|256045604|ref|ZP_05448484.1| Exodeoxyribonuclease III [Brucella melitensis bv. 1 str. Rev.1] gi|256112331|ref|ZP_05453252.1| Exodeoxyribonuclease III [Brucella melitensis bv. 3 str. Ether] gi|256258395|ref|ZP_05463931.1| Exodeoxyribonuclease III [Brucella abortus bv. 9 str. C68] gi|256263081|ref|ZP_05465613.1| exodeoxyribonuclease III [Brucella melitensis bv. 2 str. 63/9] gi|260546115|ref|ZP_05821855.1| exodeoxyribonuclease III [Brucella abortus NCTC 8038] gi|260562912|ref|ZP_05833398.1| exodeoxyribonuclease III [Brucella melitensis bv. 1 str. 16M] gi|260755677|ref|ZP_05868025.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 6 str. 870] gi|260758902|ref|ZP_05871250.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 4 str. 292] gi|260760626|ref|ZP_05872969.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 2 str. 86/8/59] gi|260884704|ref|ZP_05896318.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 9 str. C68] gi|261214952|ref|ZP_05929233.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 3 str. Tulya] gi|261314960|ref|ZP_05954157.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis M163/99/10] gi|265992027|ref|ZP_06104584.1| exodeoxyribonuclease III Xth [Brucella melitensis bv. 1 str. Rev.1] gi|265993764|ref|ZP_06106321.1| exodeoxyribonuclease III Xth [Brucella melitensis bv. 3 str. Ether] gi|62196983|gb|AAX75283.1| Xth-2, exodeoxyribonuclease III [Brucella abortus bv. 1 str. 9-941] gi|82616864|emb|CAJ11960.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth:Endonuclease/exonuclease/phosphatase family [Brucella melitensis biovar Abortus 2308] gi|225641804|gb|ACO01718.1| exodeoxyribonuclease III [Brucella melitensis ATCC 23457] gi|260096222|gb|EEW80098.1| exodeoxyribonuclease III [Brucella abortus NCTC 8038] gi|260152928|gb|EEW88020.1| exodeoxyribonuclease III [Brucella melitensis bv. 1 str. 16M] gi|260669220|gb|EEX56160.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 4 str. 292] gi|260671058|gb|EEX57879.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 2 str. 86/8/59] gi|260675785|gb|EEX62606.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 6 str. 870] gi|260874232|gb|EEX81301.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 9 str. C68] gi|260916559|gb|EEX83420.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 3 str. Tulya] gi|261303986|gb|EEY07483.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis M163/99/10] gi|262764745|gb|EEZ10666.1| exodeoxyribonuclease III Xth [Brucella melitensis bv. 3 str. Ether] gi|263003093|gb|EEZ15386.1| exodeoxyribonuclease III Xth [Brucella melitensis bv. 1 str. Rev.1] gi|263092973|gb|EEZ17134.1| exodeoxyribonuclease III [Brucella melitensis bv. 2 str. 63/9] gi|326410001|gb|ADZ67066.1| Exodeoxyribonuclease III [Brucella melitensis M28] gi|326539718|gb|ADZ87933.1| exodeoxyribonuclease III [Brucella melitensis M5-90] Length = 268 Score = 175 bits (444), Expect = 6e-42, Method: Composition-based stats. Identities = 76/266 (28%), Positives = 122/266 (45%), Gaps = 9/266 (3%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64 +ATWN+NS+R R+ + ++++ PD++CLQETK D FP + ++L Y HI GQK Sbjct: 5 IATWNINSVRLRMPLVEQFLRDYQPDVLCLQETKCPDDLFPAKGFRALGYEHIAISGQKG 64 Query: 65 YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124 Y+GVA +S+ + R + A + LRI N Y+P G + Sbjct: 65 YHGVATVSRRPLDGVEK--VDFCNMGDCRHLSAVVEAGDRKLRIHNFYVPAGGDEPDPEI 122 Query: 125 DDKISWIKRF---LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180 + K + F +R + + GD NI P +D ++ T E Sbjct: 123 NPKFAHKLAFLEEMRAIIADRKDGCSSLLVGDLNIAPLENDVWSHKQLLKIVSHTPIETE 182 Query: 181 QSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHS 238 G++D +R +Y++W Y A W ++G R+DH+ S + S Sbjct: 183 TLEDLRIKGGWSDLMRHLIAADQKIYTWWSYRAKDWDAADRGRRLDHVWGSADLESHNKG 242 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIP 264 ++ RGW +PSDH PVI + D+ Sbjct: 243 LQVLRDARGWDRPSDHVPVIATFDLD 268 >gi|17986352|ref|NP_538986.1| exodeoxyribonuclease III [Brucella melitensis bv. 1 str. 16M] gi|189025067|ref|YP_001935835.1| Exodeoxyribonuclease III [Brucella abortus S19] gi|237816360|ref|ZP_04595353.1| exodeoxyribonuclease III (xth) [Brucella abortus str. 2308 A] gi|297247235|ref|ZP_06930953.1| exodeoxyribonuclease III [Brucella abortus bv. 5 str. B3196] gi|17981940|gb|AAL51250.1| exodeoxyribonuclease iii [Brucella melitensis bv. 1 str. 16M] gi|189020639|gb|ACD73361.1| Exodeoxyribonuclease III [Brucella abortus S19] gi|237788427|gb|EEP62642.1| exodeoxyribonuclease III (xth) [Brucella abortus str. 2308 A] gi|297174404|gb|EFH33751.1| exodeoxyribonuclease III [Brucella abortus bv. 5 str. B3196] Length = 289 Score = 175 bits (444), Expect = 6e-42, Method: Composition-based stats. Identities = 76/266 (28%), Positives = 122/266 (45%), Gaps = 9/266 (3%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64 +ATWN+NS+R R+ + ++++ PD++CLQETK D FP + ++L Y HI GQK Sbjct: 26 IATWNINSVRLRMPLVEQFLRDYQPDVLCLQETKCPDDLFPAKGFRALGYEHIAISGQKG 85 Query: 65 YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124 Y+GVA +S+ + R + A + LRI N Y+P G + Sbjct: 86 YHGVATVSRRPLDGVEK--VDFCNMGDCRHLSAVVEAGDRKLRIHNFYVPAGGDEPDPEI 143 Query: 125 DDKISWIKRF---LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180 + K + F +R + + GD NI P +D ++ T E Sbjct: 144 NPKFAHKLAFLEEMRAIIADRKDGCSSLLVGDLNIAPLENDVWSHKQLLKIVSHTPIETE 203 Query: 181 QSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHS 238 G++D +R +Y++W Y A W ++G R+DH+ S + S Sbjct: 204 TLEDLRIKGGWSDLMRHLIAADQKIYTWWSYRAKDWDAADRGRRLDHVWGSADLESHNKG 263 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIP 264 ++ RGW +PSDH PVI + D+ Sbjct: 264 LQVLRDARGWDRPSDHVPVIATFDLD 289 >gi|313680366|ref|YP_004058105.1| exodeoxyribonuclease III xth [Oceanithermus profundus DSM 14977] gi|313153081|gb|ADR36932.1| exodeoxyribonuclease III Xth [Oceanithermus profundus DSM 14977] Length = 252 Score = 175 bits (443), Expect = 6e-42, Method: Composition-based stats. Identities = 63/262 (24%), Positives = 112/262 (42%), Gaps = 12/262 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +A+WNVN +RA + ++ + D++ LQE + E+ E L ++ + Sbjct: 1 MKLASWNVNGLRAALKKGFWDVVRGLDADVLGLQEVRAEEPPELPEGLGGYRWYWNPGDR 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y GVA+L + P+++ + D+ D + R I + + + + G + Sbjct: 61 KGYAGVAVLVRVPPLDVTYGIGHDEFDEEGRVITLEYE---RYYVVNAYFPNAGRGLPRL 117 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 Y + + + L + ++ GD N+ + D P + A FT E R Sbjct: 118 GY---KLAFDQAIENYLEGLRARKGVVLMGDLNVAHREIDIARPKQNQKSAGFTPEERAW 174 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 G+ D R H Y++W Y ++ +KN G RID+I++S + L A I Sbjct: 175 IDAFLKKGWIDTFRHLHPDATGAYTWWTYRFNARAKNIGWRIDYILISEDLLPHLMDAYI 234 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 SDH PV+ LD+ Sbjct: 235 YYDAY----ASDHVPVVAVLDV 252 >gi|254514282|ref|ZP_05126343.1| exodeoxyribonuclease III [gamma proteobacterium NOR5-3] gi|219676525|gb|EED32890.1| exodeoxyribonuclease III [gamma proteobacterium NOR5-3] Length = 267 Score = 175 bits (443), Expect = 6e-42, Method: Composition-based stats. Identities = 68/263 (25%), Positives = 119/263 (45%), Gaps = 13/263 (4%) Query: 5 TVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG-- 61 V ++N N IRA W+ +PDI+C+QETK + E YH Sbjct: 10 RVVSFNANGIRAAQRKGFFEWMARESPDIVCIQETKAQVHQLTDEAFHPQGYHCVYNDAE 69 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G A+ S+ +P + T L + +D + R+++ F L + +LY+P G+ + Sbjct: 70 RKGYSGTAVYSRVKPRSVTTRLGWEPVDGEGRYLQCDFAG----LSVISLYVPSGSSSDA 125 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + K ++++ FL I D+N Q D N + ++ F E R Sbjct: 126 A-LEKKFTFMELFLEHLRVLKRKRREFIICADWNTCHQNIDLRNWRANQKNSGFLPEERA 184 Query: 182 SFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 ++ + GF D+ R Y++W +W+ N G R+D+ M++P+ + A Sbjct: 185 WLDQIYDEIGFVDSFRVADTEPDRYTWWSNRGQAWANNVGWRLDYQMITPKLVPAVSGAS 244 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263 I T+ R SDH P I+ ++ Sbjct: 245 IYTEER----FSDHAPQIMEFEL 263 >gi|291276452|ref|YP_003516224.1| putative exodeoxyribonuclease [Helicobacter mustelae 12198] gi|290963646|emb|CBG39478.1| putative exodeoxyribonuclease [Helicobacter mustelae 12198] Length = 250 Score = 175 bits (443), Expect = 6e-42, Method: Composition-based stats. Identities = 68/260 (26%), Positives = 114/260 (43%), Gaps = 13/260 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + ++ + DI C+QE+K F + + + + Sbjct: 1 MRLISWNVNGLRACMNKGFMDFFRQIDADIFCIQESKMHPDQADF-VFDGYHGYWNSAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+GV +LSK +P+ + + + D + R I A + + N+Y P+ Sbjct: 60 KGYSGVVVLSKQEPLCVEYDMGIEHHDKEGRVICAEYP----DFYLINVYTPNSKRELER 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + + LE ++PLI GD N+ + D NP +A FT E R+ Sbjct: 116 L--EYRMQWEDDFLNFLKNLERKKPLIICGDLNVAHKEIDLKNPKTNRRNAGFTDEEREK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 L GF D R + YS+W Y + N G RID+ + S L A+I Sbjct: 174 MTTLLENGFIDTFRYFYPDLEGAYSWWSYMGRARQNNTGWRIDYFLCSEILQKRLIEAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 ++ G SDH PV + + Sbjct: 234 YSEILG----SDHCPVGLVI 249 >gi|257783920|ref|YP_003179137.1| exodeoxyribonuclease III Xth [Atopobium parvulum DSM 20469] gi|257472427|gb|ACV50546.1| exodeoxyribonuclease III Xth [Atopobium parvulum DSM 20469] Length = 259 Score = 175 bits (443), Expect = 6e-42, Method: Composition-based stats. Identities = 68/263 (25%), Positives = 115/263 (43%), Gaps = 15/263 (5%) Query: 5 TVATWNVNSIRARIHN---LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + +WNVN +RA + + N D+ LQETK ++ + L Sbjct: 8 KLISWNVNGLRAVLKKEPSFTEIFETINADVFALQETKLQEGQVELD-LPGYVQTWNYAD 66 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G A+ S+ P++++ + D + R F + + + N Sbjct: 67 RKGYSGTAVFSRETPLQVIRQIGCPVADDEGRVCALEFE------KFWFVCVYTPNSKDQ 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 D+ + R L ++P+I GD+N+ D NP +A F+ E R+ Sbjct: 121 LARLDERLEWDQHYRDFLAELSKQKPVITCGDFNVAHNEIDLKNPSSNRQNAGFSDEERE 180 Query: 182 SFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 SF KL + GFTD R H YS+W Y ++ N G RID+ ++S + SA Sbjct: 181 SFTKLLDAGFTDTFRYRHPDITGAYSWWSYRFNARKNNAGWRIDYFLVSDRIAEQVKSAS 240 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263 I ++ G SDH P+ +S+++ Sbjct: 241 ILSEIYG----SDHCPIELSIEL 259 >gi|119899953|ref|YP_935166.1| exodeoxyribonuclease III [Azoarcus sp. BH72] gi|119672366|emb|CAL96280.1| Exodeoxyribonuclease III [Azoarcus sp. BH72] Length = 260 Score = 175 bits (443), Expect = 6e-42, Method: Composition-based stats. Identities = 67/266 (25%), Positives = 121/266 (45%), Gaps = 15/266 (5%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59 ++ + + N+N IR+ W+ N D++C+QE K + + Y Sbjct: 1 MLRIISANLNGIRSATTKGFLDWLPAQNADVVCVQELKAQAGDLTDAMRAPAGYQGWFHY 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GV I S+ P +V L D+D + R+++A F L + +LYLP G+ Sbjct: 61 AEKKGYSGVGIYSRKAPDRVVEGLGIADIDAEGRYLQADFGA----LSVISLYLPSGSSS 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K S+++RF+ ++ + ++ GD+NI + D N + ++ F E Sbjct: 117 EERQQA-KFSFMERFMPRLAELRRCGQEVVICGDWNIAHREIDLKNWKSNQKNSGFLPEE 175 Query: 180 RQSFQKLQN-MGFTDAIRATHDT--HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 R L + G+ D RA + Y++W +W+KN G RID+ + +P + Sbjct: 176 RAWIGTLFDTHGWVDVYRALYPEATGDSYTWWSNRGQAWAKNVGWRIDYQIATPGIAARA 235 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLD 262 + + R SDH P++V D Sbjct: 236 RAGSVYKAQR----FSDHAPLVVDYD 257 >gi|83309117|ref|YP_419381.1| exonuclease III [Magnetospirillum magneticum AMB-1] gi|82943958|dbj|BAE48822.1| Exonuclease III [Magnetospirillum magneticum AMB-1] Length = 263 Score = 175 bits (443), Expect = 7e-42, Method: Composition-based stats. Identities = 75/264 (28%), Positives = 115/264 (43%), Gaps = 5/264 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62 + + TWN+NSIR RI L NPDIICLQE K +D FP + + + + H+ G Sbjct: 1 MRLVTWNINSIRLRIDLLRQVASVMNPDIICLQEIKVDDPLFPLDACREMGFGHVAFHGM 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K YNGVAILS+ E D + + L I +P T+ Sbjct: 61 KGYNGVAILSRLPIAEARPLSRCGRDDRRHLMARLENGVEVHCLYIPAG-GDIPDPETND 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K+ K+ +++ +A+ + I AGD+NI P D ++ T + Sbjct: 120 KFAHKLDFVREITAWAAAEFTPDSRAILAGDFNIAPLEADVWSHKQLLKVVSHTPVEVEL 179 Query: 183 FQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSWSKN-KGIRIDHIMLSPEATSLLHSA 239 Q L+++W Y + W KN +G R+DH+ ++P L Sbjct: 180 LNAFQASVPFVDAMRHFVPPEEKLFTWWSYRSPDWQKNDRGRRLDHVWVTPALVPSLRGM 239 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 + + R W +PSDH PV+V D+ Sbjct: 240 LVAREARSWEQPSDHVPVMVDFDL 263 >gi|308179822|ref|YP_003923950.1| exodeoxyribonuclease III [Lactobacillus plantarum subsp. plantarum ST-III] gi|308045313|gb|ADN97856.1| exodeoxyribonuclease III [Lactobacillus plantarum subsp. plantarum ST-III] Length = 254 Score = 175 bits (443), Expect = 7e-42, Method: Composition-based stats. Identities = 68/263 (25%), Positives = 111/263 (42%), Gaps = 13/263 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + E + D C+QETK + + + + Sbjct: 1 MKLISWNVNGLRAAVKHGFVTTFNELDADFFCVQETKLQAGQIELD-FPGYYQYWNYAER 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K++P+ + + + D + R I + + G + Sbjct: 60 KGYSGTAIFTKHEPLNVTYGIGVPEFDDEGRVITLEYA---DYYVLTCYTPNSGGELKRL 116 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 Y + + L +PLIF GD N+ + D N + A FT E R Sbjct: 117 DYRQQW---EDAFLTYINSLSANKPLIFCGDLNVAHENIDLKNWHSNHHSAGFTDEERTK 173 Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L G+TD R + +YS+W Y + N G RID+ + S + S L +ARI Sbjct: 174 FDRLLAAGYTDTFRHFYPDQTDIYSWWSYRGHARDNNSGWRIDYFITSQQLDSQLLNARI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLDIP 264 + G SDH PV + + +P Sbjct: 234 HNEIFG----SDHCPVELDIILP 252 >gi|126724355|ref|ZP_01740198.1| exodeoxyribonuclease III, putative [Rhodobacterales bacterium HTCC2150] gi|126705519|gb|EBA04609.1| exodeoxyribonuclease III, putative [Rhodobacterales bacterium HTCC2150] Length = 262 Score = 175 bits (443), Expect = 7e-42, Method: Composition-based stats. Identities = 79/262 (30%), Positives = 118/262 (45%), Gaps = 6/262 (2%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQK 63 T+ATWN+NS+R R + ++ E+ PD++CLQE K+ P E+ L Y H+ GQK Sbjct: 4 TLATWNINSVRLREPLVCKFLAEHGPDVLCLQECKSPVDKIPTESFAELGYTHMIANGQK 63 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 YNGVAILSK +E D + + + + N + K Sbjct: 64 GYNGVAILSKLPIVETHRFDFADLGHARHIAGKMENGVTIHNFYVPAG-GDEPNVEKNEK 122 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVRQS 182 + K+ ++K + + I GD NI P D ++ T EV + Sbjct: 123 FAQKLQYLKDMRDWGQSEKPTK--SILVGDLNIAPLEDDVWDHKKLLKVVSHTPLEVEKL 180 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLLHSARI 241 + + D RA LYS+W Y A W +KG R+DH+ + + HS+R+ Sbjct: 181 AEVQAAADWVDVTRADIPEGKLYSWWSYRARDWDTADKGRRLDHVWATSDIAKSGHSSRV 240 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 RGW KPSDH P+I D+ Sbjct: 241 IRDARGWEKPSDHAPIITEFDL 262 >gi|254804108|ref|YP_003082329.1| putative DNA repair endonuclease [Neisseria meningitidis alpha14] gi|254667650|emb|CBA03464.1| putative DNA repair endonuclease [Neisseria meningitidis alpha14] Length = 259 Score = 175 bits (443), Expect = 7e-42, Method: Composition-based stats. Identities = 64/264 (24%), Positives = 120/264 (45%), Gaps = 13/264 (4%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ + + NVN IR+ +I + DI+C+QE K ++ + + H Sbjct: 1 MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADLSADMKNPHGMHGYWHC 60 Query: 62 --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 ++ Y+GVA+ SK +P + + ++ D + RF+ F L + +LYLP G+ Sbjct: 61 AEKRGYSGVAVYSKRKPDNVQIGMGIEEFDREGRFVRCDFD----RLSVISLYLPSGSSA 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K ++ F ++ GD+NI Q D N + ++ F E Sbjct: 117 EERQQV-KYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEE 175 Query: 180 RQSF-QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R+ + + +G+TD R + Y++W +++K+ G RID+ M++PE + S Sbjct: 176 REWIGKVIHKLGWTDMWRTLYPDVPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVS 235 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 A + K SDH P+++ D Sbjct: 236 AHVYKD----EKFSDHAPLVMEYD 255 >gi|225077483|ref|ZP_03720682.1| hypothetical protein NEIFLAOT_02546 [Neisseria flavescens NRL30031/H210] gi|224951194|gb|EEG32403.1| hypothetical protein NEIFLAOT_02546 [Neisseria flavescens NRL30031/H210] Length = 259 Score = 175 bits (443), Expect = 7e-42, Method: Composition-based stats. Identities = 65/264 (24%), Positives = 120/264 (45%), Gaps = 13/264 (4%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ + + NVN IR+ +I + DI+C+QE K ++ + + H Sbjct: 1 MLKIISANVNGIRSAYKKGFYEYIAASGVDIVCVQELKAQEADLSDDMKNPHGMHGYWHC 60 Query: 62 --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 ++ Y+GVA+ SK +P + + ++ D + RF+ F L + +LYLP G+ Sbjct: 61 AEKRGYSGVAVYSKRKPDNVQIGMGIEEFDREGRFVRCDFG----KLSVISLYLPSGSSA 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K ++ F ++ GD+NI Q D N + ++ F E Sbjct: 117 EERQQV-KYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEE 175 Query: 180 RQSF-QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R+ + + +G+TD R + Y++W +++K+ G RID+ M++PE + S Sbjct: 176 REWIGKVIHKLGWTDMWRTLYPDVPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVS 235 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 A + K SDH P++V D Sbjct: 236 AHVYKD----EKFSDHAPLVVEYD 255 >gi|153951075|ref|YP_001397480.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. doylei 269.97] gi|152938521|gb|ABS43262.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. doylei 269.97] Length = 259 Score = 175 bits (443), Expect = 7e-42, Method: Composition-based stats. Identities = 62/264 (23%), Positives = 100/264 (37%), Gaps = 12/264 (4%) Query: 2 SVVTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 ++ + +WNVN +R+ N WIK+ D I QE K + FP + + H+ Sbjct: 6 KIMKLLSWNVNGLRSICDKNALDWIKKEKIDFIGFQEIKAHEDKFPKKIYEYPFKHMYFN 65 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 K ++S V D + I + N Sbjct: 66 SAKRAGYSGVMSLCNFDSEVKKCEFFDDEEGRVLEHRFKNIALFNIYFPN------GQKD 119 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + + K+ + FL + ++ L+ +I GD N + D +P N + F R Sbjct: 120 EERLNFKMKFYTDFLVYLNKLLKDGFEIIICGDVNTAHKEIDLTHPKANANTSGFLPIER 179 Query: 181 QSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 L +GF D R + + YS+W Y + +N G RID+ +S L +A Sbjct: 180 AWIDDLLKLGFVDTFREINGEIKEKYSWWSYRMKARERNVGWRIDYFFISKGLKDKLKNA 239 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 I G SDH PV + +DI Sbjct: 240 FIRDDIFG----SDHAPVGIEIDI 259 >gi|86149633|ref|ZP_01067863.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni CF93-6] gi|88597280|ref|ZP_01100515.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni 84-25] gi|218561918|ref|YP_002343697.1| exodeoxyribonuclease [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|85839901|gb|EAQ57160.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni CF93-6] gi|88190341|gb|EAQ94315.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni 84-25] gi|112359624|emb|CAL34409.1| exodeoxyribonuclease [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|284925531|gb|ADC27883.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni IA3902] gi|315927175|gb|EFV06525.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315928582|gb|EFV07877.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni 305] Length = 252 Score = 175 bits (443), Expect = 7e-42, Method: Composition-based stats. Identities = 62/262 (23%), Positives = 97/262 (37%), Gaps = 12/262 (4%) Query: 4 VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA N WI + D I QE K + FP + + H+ Sbjct: 1 MKLLSWNVNGLRAICDKNALDWIAQEQIDFIGFQEIKAHEDKFPKKIYEYPFKHMYFNSA 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K ++S V D + I + N Sbjct: 61 KRAGYSGVMSLCNFNSEVKKCEFFDDEEGRVLEHRFKNIALFNIYFPN------GQKDEE 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + K+ + FL + + L+ +I GD N + D +P N + F R Sbjct: 115 RLNFKMQFYADFLVYLDKLLKDGFEIIICGDVNTAHKEIDLTHPKANANTSGFLPIERAW 174 Query: 183 FQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 L +GF D R + + YS+W Y + +N G RID+ +S L +A I Sbjct: 175 IDDLLKLGFIDTFREINGEIKEKYSWWSYRMKARERNVGWRIDYFFISKGLKDKLKNAFI 234 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 G SDH PV + +DI Sbjct: 235 RDDIFG----SDHAPVGIEIDI 252 >gi|330818664|ref|YP_004362369.1| Endonuclease/exonuclease/phosphatase family protein [Burkholderia gladioli BSR3] gi|327371057|gb|AEA62413.1| Endonuclease/exonuclease/phosphatase family protein [Burkholderia gladioli BSR3] Length = 257 Score = 175 bits (443), Expect = 7e-42, Method: Composition-based stats. Identities = 60/264 (22%), Positives = 113/264 (42%), Gaps = 13/264 (4%) Query: 3 VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59 ++ V T N+N IR A W+ + D +C+QE K + P E + H Sbjct: 1 MLRVITANLNGIRSAAKKGFFDWLGDQKADCVCVQEIKVSADDLPPEFAAPHGFTGHFHH 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G + ++ +P +++ + D + R++EA + L + ++Y+P G+ Sbjct: 61 AEKKGYSGAGLYTRREPDDLIIGYGSSEFDSEGRYVEARYG----KLSVISVYVPSGS-S 115 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K ++ F+ ++ + +I GD NI+ + D N + ++ E Sbjct: 116 GEERQQAKFRFMAEFMPHLAELKAKKREVILCGDVNIVHKEIDIRNWKSNQKNSGCLPEE 175 Query: 180 RQSFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R +L + G+ D R Y++W +++KN G RID+ + +P Sbjct: 176 RAWLTQLFDEVGYVDVFRTLDPRPDQYTWWSNRGQAYAKNVGWRIDYQIATPGVAGTAKQ 235 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 I K SDH P+ V D Sbjct: 236 TSIFRDI----KFSDHAPLTVDYD 255 >gi|328702292|ref|XP_001952290.2| PREDICTED: recombination repair protein 1-like [Acyrthosiphon pisum] Length = 317 Score = 175 bits (443), Expect = 7e-42, Method: Composition-based stats. Identities = 70/263 (26%), Positives = 114/263 (43%), Gaps = 12/263 (4%) Query: 4 VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFET-LQSLNYHIETCG 61 + + +WNV +RA + + ++K+ +PDIICLQE K +K P E L +I + Sbjct: 64 LKIISWNVAGLRAWLKKDVVEYLKKEDPDIICLQEIKCTEKQMPDEAKLPGYKIYINSGD 123 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 + Y+GVA+ SK +PI + DLD + + G Sbjct: 124 KAGYSGVALYSKTKPISVRMGKEIKDLDDNEGRVIEAEYEQFFLVSTYIPNAGAGLKTLP 183 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 K R + L+ ++P++ GD N+ + D NP A FT E R Sbjct: 184 -----KRMKWDEAFRKYLKELDTKKPVVLTGDLNVAHEEIDIANPKTNTKSAGFTKEERD 238 Query: 182 SFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + L GF D R + Y+FW Y+ +S +KN G R+D+ + S + + Sbjct: 239 NMSLLLEQGFVDTFRTLNPEKTGAYTFWTYFHNSRAKNVGWRLDYFITSKRFMDNVCDST 298 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263 I + G SDH P++ ++I Sbjct: 299 IRNEVLG----SDHCPIVFYINI 317 >gi|254480722|ref|ZP_05093969.1| exodeoxyribonuclease III [marine gamma proteobacterium HTCC2148] gi|214039305|gb|EEB79965.1| exodeoxyribonuclease III [marine gamma proteobacterium HTCC2148] Length = 260 Score = 174 bits (442), Expect = 8e-42, Method: Composition-based stats. Identities = 71/263 (26%), Positives = 118/263 (44%), Gaps = 13/263 (4%) Query: 5 TVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG-- 61 V T N N IRA W+ + N D+IC+QETK + Q YH Sbjct: 3 RVITLNTNGIRAAARKGFFDWLPKQNADVICIQETKAQLDQLGDPVFQPEGYHRYFNDAV 62 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G AI SK +P +++T L D D + R+++A + + + +LY+P G+ Sbjct: 63 KKGYSGTAIYSKVKPRKVITSLGWDPADSEGRYVQADYDG----ISVISLYMPSGSSSEE 118 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 K ++ F+ I D+NI + D N ++ F E R Sbjct: 119 VLQK-KYRFMDLFMEHLKGLRRKRREFIICADWNICHKEIDLRNWRSNRKNSGFLPEERA 177 Query: 182 SFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 +L + G+ D+ R ++ Y++W +W+KN G R+D+ +++P + +A Sbjct: 178 WLDQLYDEVGYIDSFRLVNEEPDQYTWWSNRGQAWAKNVGWRLDYQVITPRLADKVLAAD 237 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263 I T R SDH P I+ D+ Sbjct: 238 IYTDER----FSDHAPQIMDYDL 256 >gi|169823955|ref|YP_001691566.1| exodeoxyribonuclease III [Finegoldia magna ATCC 29328] gi|167830760|dbj|BAG07676.1| exodeoxyribonuclease III [Finegoldia magna ATCC 29328] Length = 253 Score = 174 bits (442), Expect = 8e-42, Method: Composition-based stats. Identities = 64/262 (24%), Positives = 105/262 (40%), Gaps = 13/262 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFET-LQSLNYHIETCG 61 + + +WNVN RA + N DI CLQE K ++ E ++ + + + Sbjct: 1 MKLISWNVNGYRAVMKKGFMDAFNSLNADIFCLQEIKMKENQMTDEMNIEGYHRYSYSAN 60 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 + Y+G + +K +PI + + D+ D + R I + + + Sbjct: 61 KAGYSGTLVYTKVEPIGVSYGIGIDEHDTEGRVITCEYE---DFFLVNVYTPNSKQKLER 117 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 Y + L +P+I GD N+ D NP A FT E R Sbjct: 118 LDYR---MVWEDEFHNYLNILRDRKPVIVCGDLNVAHNEIDLKNPQSNRRSAGFTDEERN 174 Query: 182 SFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 L N G+ D R + YS+W Y+A + +N G RID+ ++S + L A+ Sbjct: 175 KMSLLLNDGYIDTFRYFYPDKTDEYSYWSYFAKARERNAGWRIDYFLVSDDLKDNLVDAK 234 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I G SDH PV + ++ Sbjct: 235 IHQSIMG----SDHCPVELEIN 252 >gi|187927152|ref|YP_001897639.1| exodeoxyribonuclease III Xth [Ralstonia pickettii 12J] gi|241661660|ref|YP_002980020.1| exodeoxyribonuclease III Xth [Ralstonia pickettii 12D] gi|309780146|ref|ZP_07674897.1| exodeoxyribonuclease III [Ralstonia sp. 5_7_47FAA] gi|187724042|gb|ACD25207.1| exodeoxyribonuclease III Xth [Ralstonia pickettii 12J] gi|240863687|gb|ACS61348.1| exodeoxyribonuclease III Xth [Ralstonia pickettii 12D] gi|308920849|gb|EFP66495.1| exodeoxyribonuclease III [Ralstonia sp. 5_7_47FAA] Length = 261 Score = 174 bits (442), Expect = 8e-42, Method: Composition-based stats. Identities = 59/264 (22%), Positives = 112/264 (42%), Gaps = 12/264 (4%) Query: 3 VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IET 59 ++ + + N+N +R A W+ + + D +C+QE K + E L YH + Sbjct: 1 MLRIISANLNGVRSAASKGFFDWMGKQDADFVCVQELKCAQDDMTPEFLAPHGYHGVFQH 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G + ++++P E++ + D + R++EA + L + ++Y+P G+ Sbjct: 61 AVKKGYSGAGLYTRHKPDEVIVGFDNGEFDAEGRYVEARYG----KLSVISVYVPSGSSG 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + R E ++ GD NI+ + D N + ++ E Sbjct: 117 EERQQAKFRFMDLFMEHLKDLRHEKGREVVLCGDVNIVHKEIDIKNWKGNQKNSGCLPEE 176 Query: 180 RQSFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R KL + G+ D R Y++W +++KN G RID+ + +P + Sbjct: 177 RAWLTKLFDEVGYVDVFRTLDQRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGIAATARR 236 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 A I K SDH P+ + D Sbjct: 237 ASIFKDI----KFSDHAPLTIDYD 256 >gi|260072724|gb|ACX30620.1| exonuclease III [uncultured bacterium ARCTIC96BD-19] Length = 254 Score = 174 bits (442), Expect = 8e-42, Method: Composition-based stats. Identities = 55/263 (20%), Positives = 103/263 (39%), Gaps = 12/263 (4%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ-SLNYHIETCG 61 + + T NVN IRA W+K+ N D++CLQE K ++ + + + Sbjct: 1 MRIITINVNGIRAAERKGFFNWLKKQNADVVCLQEIKAQEDQLDERFYPLEMFTYYHSAE 60 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G + K +P +I D ++ ++ + + Sbjct: 61 RKGYSGTGLYCKSKPDKISYSPWEDMNSEGRIIQADFGDLSVLSIYLPSGSSKEERQALK 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 ++ RFL + + + GD+NI + D N + ++ F E R Sbjct: 121 MEFIYD-----RFLPHLRELQKDNRRYVICGDWNIAHKKIDLKNWRSNQKNSGFLPEERA 175 Query: 182 SFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 L + G+ D+ R ++ Y++W +W N G R+D+ ++S S Sbjct: 176 WLDILYDEVGYIDSFREINNEEFQYTWWSNRGQAWLNNTGWRLDYHVVSSNMAGTATSCE 235 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263 I R SDH+P+I+ + Sbjct: 236 IYKAER----FSDHSPLIIDYQL 254 >gi|162329924|pdb|2O3H|A Chain A, Crystal Structure Of The Human C65a Ape Length = 285 Score = 174 bits (442), Expect = 8e-42, Method: Composition-based stats. Identities = 74/269 (27%), Positives = 126/269 (46%), Gaps = 17/269 (6%) Query: 2 SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN----YH 56 + + +A+WNV+ +RA I W+KE PDI+CLQETK + P E + Y Sbjct: 27 ATLKIASWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQYW 86 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 ++ Y+GV +LS+ P+++ + ++ D + R I A F + + G Sbjct: 87 SAPSDKEGYSGVGLLSRQCPLKVSYGIGDEEHDQEGRVIVAEF---DSFVLVTAYVPNAG 143 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + +Y + R + L +PL+ GD N+ + D NP + +A FT Sbjct: 144 RGLVRLEYRQRWDEAFRKF---LKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 200 Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E + + LQ + D+ R + + Y+FW Y ++ SKN G R+D+ +LS Sbjct: 201 PQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLP 260 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 L ++I +K G SDH P+ + L + Sbjct: 261 ALCDSKIRSKALG----SDHCPITLYLAL 285 >gi|28377662|ref|NP_784554.1| exodeoxyribonuclease III [Lactobacillus plantarum WCFS1] gi|254555843|ref|YP_003062260.1| exodeoxyribonuclease III [Lactobacillus plantarum JDM1] gi|28270495|emb|CAD63397.1| exodeoxyribonuclease III [Lactobacillus plantarum WCFS1] gi|254044770|gb|ACT61563.1| exodeoxyribonuclease III [Lactobacillus plantarum JDM1] Length = 254 Score = 174 bits (442), Expect = 8e-42, Method: Composition-based stats. Identities = 68/263 (25%), Positives = 111/263 (42%), Gaps = 13/263 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + E + D C+QETK + + + + Sbjct: 1 MKLISWNVNGLRAAVKHGFVTTFNELDADFFCVQETKLQAGQIELD-FPGYYQYWNYAER 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K++P+ + + + D + R I + + G + Sbjct: 60 KGYSGTAIFTKHEPLNVTYGIGVPEFDDEGRVITLEYA---DYYVLTCYTPNSGGELKRL 116 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 Y + + L +PLIF GD N+ + D N + A FT E R Sbjct: 117 DYRQQW---EDAFLTYINSLSANKPLIFCGDLNVAHENIDLKNWRSNHHSAGFTDEERTK 173 Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L G+TD R + +YS+W Y + N G RID+ + S + S L +ARI Sbjct: 174 FDRLLAAGYTDTFRHFYPDQTDIYSWWSYRGHARDNNSGWRIDYFITSQQLDSQLLNARI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLDIP 264 + G SDH PV + + +P Sbjct: 234 HNEIFG----SDHCPVELDIILP 252 >gi|300705466|ref|YP_003747069.1| exodeoxyribonuclease III/endonuclease/phosphatase [Ralstonia solanacearum CFBP2957] gi|299073130|emb|CBJ44488.1| putative exodeoxyribonuclease III/endonuclease/phosphatase [Ralstonia solanacearum CFBP2957] Length = 261 Score = 174 bits (442), Expect = 8e-42, Method: Composition-based stats. Identities = 59/264 (22%), Positives = 112/264 (42%), Gaps = 12/264 (4%) Query: 3 VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IET 59 ++ + + N+N +R A W+ + + D +C+QE K + E L YH + Sbjct: 1 MLRIISANLNGVRSAASKGFFDWMGKQDADFVCVQELKCAQDDMTPELLAPHGYHGVFQH 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G + +++QP +++ G + D + R++EA + L + ++Y+P G+ Sbjct: 61 AVKKGYSGAGLYTRHQPDDVIVGFDGGEFDAEGRYVEARYG----KLSVISVYVPSGSSG 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + R E ++ GD NI+ + D N + ++ E Sbjct: 117 EERQQAKYRFMDLFMQHLVDLRHEKGREVVLCGDVNIVHKEIDIKNWKGNQKNSGCLPEE 176 Query: 180 RQSFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R +L + G+ D R Y++W +++KN G RID+ + +P + Sbjct: 177 RAWLTRLFDEVGYVDVFRTLDTRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGIAATARR 236 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 I K SDH P+ V D Sbjct: 237 TSIFRDI----KFSDHAPLTVDYD 256 >gi|301066021|ref|YP_003788044.1| exonuclease III [Lactobacillus casei str. Zhang] gi|300438428|gb|ADK18194.1| Exonuclease III [Lactobacillus casei str. Zhang] Length = 252 Score = 174 bits (442), Expect = 8e-42, Method: Composition-based stats. Identities = 64/257 (24%), Positives = 108/257 (42%), Gaps = 12/257 (4%) Query: 4 VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + E + D CLQETK + + L + + + Sbjct: 1 MKLISWNVNGLRAVLKKEFMTIFNELDADWFCLQETKMQAGQVELD-LPGYHQYFNYAER 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K++P+ + + + D + R I + + Sbjct: 60 KGYSGTAIFTKHEPLNVTYGMGVPEHDTEGRIITLEYPNFYLMTVYTPNSGGELKRLDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + + +L ++PL++ GD N+ Q D N ++A FT E R Sbjct: 120 QQ------WDKDFLAYTNQLAAKKPLVYCGDLNVAHQEIDLKNDKTNHHNAGFTDEERAD 173 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F K + GF D R + YS+W Y + + N G RID+ + S + + A+I Sbjct: 174 FTKQLDSGFIDTFRNLYPDTVTYSWWSYRFHARANNAGWRIDYFVSSRDFKPYIQDAKIL 233 Query: 243 TKPRGWTKPSDHTPVIV 259 T G SDH PV + Sbjct: 234 TDIMG----SDHCPVEL 246 >gi|227876386|ref|ZP_03994498.1| possible exodeoxyribonuclease III [Mobiluncus mulieris ATCC 35243] gi|269975950|ref|ZP_06182954.1| exodeoxyribonuclease III Xth [Mobiluncus mulieris 28-1] gi|306817278|ref|ZP_07451024.1| exodeoxyribonuclease III [Mobiluncus mulieris ATCC 35239] gi|227842927|gb|EEJ53124.1| possible exodeoxyribonuclease III [Mobiluncus mulieris ATCC 35243] gi|269935778|gb|EEZ92308.1| exodeoxyribonuclease III Xth [Mobiluncus mulieris 28-1] gi|304649958|gb|EFM47237.1| exodeoxyribonuclease III [Mobiluncus mulieris ATCC 35239] Length = 288 Score = 174 bits (442), Expect = 9e-42, Method: Composition-based stats. Identities = 64/288 (22%), Positives = 114/288 (39%), Gaps = 30/288 (10%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++TWN+NSIR+R+ + ++ +N D++ +QE K FP E + Y + G Sbjct: 1 MRISTWNINSIRSRLPRVLDFLCRSNVDVLAMQEIKCRVSQFPVEAFLASGYQVFVNGLN 60 Query: 64 SYNGVAILSKYQPIEIVTH------LPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 +NGVAI + V +P + + +LY+P+G Sbjct: 61 QWNGVAIAVRADLDAQVLGTEFSGKIPQPPFGKPPVVEPRALGVRVAGIECWSLYVPNGR 120 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEP--LIFAGDYNIIPQPHDCYNPIIWENDACF 175 I + + K++W++ A L +F GD+NI P D ++ + Sbjct: 121 EIDNPHFAYKLAWLEALRSHAHTLLAANPTALGLFMGDFNIAPCDEDVWDIQEFVGATHV 180 Query: 176 T----------------------LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD 213 + E S + + T +++WDY Sbjct: 181 SVPEREAFARLLQSDTLAQAVSLDETAISRIGTDSTNCGGLVEVTRQFAPGWTYWDYQKA 240 Query: 214 SWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 W +N+G++ID + +P + A I + R KPSDH PV++ L Sbjct: 241 RWRRNQGMKIDFALATPNLADKITGAFIGREERDGEKPSDHVPVVLEL 288 >gi|325127357|gb|EGC50292.1| exodeoxyribonuclease III [Neisseria meningitidis N1568] Length = 259 Score = 174 bits (442), Expect = 9e-42, Method: Composition-based stats. Identities = 65/264 (24%), Positives = 120/264 (45%), Gaps = 13/264 (4%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ + + NVN IR+ +I + DI+C+QE K ++ + + H Sbjct: 1 MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADLSADMKNPHGMHGHWHC 60 Query: 62 --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 ++ Y+GVA+ SK +P + + ++ D + RF+ F L + +LYLP G+ Sbjct: 61 AEKRGYSGVAVYSKRKPDNVQIGMGIEEFDREGRFVRCDFG----RLSVISLYLPSGSSA 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K ++ F ++ GD+NI Q D N + ++ F E Sbjct: 117 EERQQV-KYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEE 175 Query: 180 RQSF-QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R+ + + +G+TD R + + Y++W +++K+ G RID+ M++PE S Sbjct: 176 REWIGKVIHTLGWTDMWRTLYPDNPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAVKALS 235 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 A + K SDH P++V D Sbjct: 236 AHVYKD----EKFSDHAPLVVEYD 255 >gi|315057682|gb|ADT72011.1| Exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni S3] Length = 252 Score = 174 bits (442), Expect = 9e-42, Method: Composition-based stats. Identities = 62/262 (23%), Positives = 97/262 (37%), Gaps = 12/262 (4%) Query: 4 VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA N WI + D I QE K + FP + + H+ Sbjct: 1 MKLLSWNVNGLRAICDKNALDWIAQEQIDFIGFQEIKAHEDKFPKKIYEYPFKHMYFNSA 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K ++S V D + I + N Sbjct: 61 KRAGYSGVMSLCNFNSEVKKCEFFDDEEGRVLEHRFKNIALFNIYFPN------GQKDEE 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + K+ + FL + + L+ +I GD N + D +P N + F R Sbjct: 115 RLNFKMKFYADFLVYLDKLLKDGFEIIICGDVNTAHKEIDLTHPKANANTSGFLPIERAW 174 Query: 183 FQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 L +GF D R + + YS+W Y + +N G RID+ +S L +A I Sbjct: 175 IDDLLKLGFIDTFREINGEIKEKYSWWSYRMKARERNVGWRIDYFFISKGLKDKLKNAFI 234 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 G SDH PV + +DI Sbjct: 235 RDDIFG----SDHAPVGIEIDI 252 >gi|157414552|ref|YP_001481808.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni 81116] gi|157385516|gb|ABV51831.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni 81116] gi|315932053|gb|EFV11006.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni 327] Length = 252 Score = 174 bits (442), Expect = 9e-42, Method: Composition-based stats. Identities = 62/262 (23%), Positives = 97/262 (37%), Gaps = 12/262 (4%) Query: 4 VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA N WI + D I QE K + FP + + H+ Sbjct: 1 MKLLSWNVNGLRAICDKNALDWIAQEQIDFIGFQEIKAHEDKFPKKIYEYPFKHMYFNSA 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K ++S V D + I + N Sbjct: 61 KRAGYSGVMSLCNFDSEVKKCEFFDDEEGRVLEHRFKNIALFNIYFPN------GQKDEE 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + K+ + FL + + L+ +I GD N + D +P N + F R Sbjct: 115 RLNFKMKFYADFLVYLDKLLKDGFEIIICGDVNTAHKEIDLTHPKANANTSGFLPIERAW 174 Query: 183 FQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 L +GF D R + + YS+W Y + +N G RID+ +S L +A I Sbjct: 175 IDDLLKLGFIDTFREINGEIKEKYSWWSYRMKARERNVGWRIDYFFISKGLKDKLKNAFI 234 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 G SDH PV + +DI Sbjct: 235 RDDIFG----SDHAPVGIEIDI 252 >gi|283955677|ref|ZP_06373170.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni 1336] gi|283792902|gb|EFC31678.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni 1336] Length = 252 Score = 174 bits (442), Expect = 9e-42, Method: Composition-based stats. Identities = 62/262 (23%), Positives = 97/262 (37%), Gaps = 12/262 (4%) Query: 4 VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA N WI + D I QE K + FP + + H+ Sbjct: 1 MKLLSWNVNGLRAICDKNALDWIAQEKIDFIGFQEIKAHEDKFPKKIYEYPFKHMYFNSA 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K ++S V D + I + N Sbjct: 61 KRAGYSGVMSLCNFDSEVKKCEFFDDEEGRVLEHRFKNIALFNIYFPN------GQKDEE 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + K+ + FL + + L+ +I GD N + D +P N + F R Sbjct: 115 RLNFKMKFYADFLAYLDKLLKDGFEIIICGDVNTAHKEIDLTHPKANVNTSGFLPIERAW 174 Query: 183 FQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 L +GF D R + + YS+W Y + +N G RID+ +S L +A I Sbjct: 175 IDDLLKLGFIDTFREINGEIKEKYSWWSYRMKARERNVGWRIDYFFISKGLKDKLKNAFI 234 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 G SDH PV + +DI Sbjct: 235 RDDIFG----SDHAPVGIEIDI 252 >gi|182413315|ref|YP_001818381.1| exodeoxyribonuclease III Xth [Opitutus terrae PB90-1] gi|177840529|gb|ACB74781.1| exodeoxyribonuclease III Xth [Opitutus terrae PB90-1] Length = 253 Score = 174 bits (442), Expect = 9e-42, Method: Composition-based stats. Identities = 70/261 (26%), Positives = 115/261 (44%), Gaps = 10/261 (3%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPF-ETLQSLNYHIETCG 61 + + +WNVN +RA + ++ + + D+ICLQETK + H + Sbjct: 1 MKLVSWNVNGVRAVLKKGFLDYMGKVDADVICLQETKAHPGDVQHVAWTAGYTPHWYSAV 60 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G A+ ++ P+++ + D + R I A F + N+Y P+ + Sbjct: 61 KKGYSGTALFTRVAPLKVNFGIGLPGHDDEGRVITAEFA----DFFLVNVYQPNSQRGLT 116 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 W FL F + + +P++F GD N+ Q D NP +A FT E R Sbjct: 117 RLKYRTEEWDPAFLAFLKKLEKKGKPVVFCGDLNVAHQEIDLTNPKTNRRNAGFTDEERA 176 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +F KL GF D R Y++W + ++N G R+D+ + S + L A I Sbjct: 177 NFSKLLASGFVDTFREFEKGPGHYTWWSQMMNCRARNIGWRVDYFVASEKLKPALKRAWI 236 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 + G SDH PV + L Sbjct: 237 SPEVMG----SDHCPVGLELK 253 >gi|328958150|ref|YP_004375536.1| apurinic/apyrimidinic endonuclease [Carnobacterium sp. 17-4] gi|328674474|gb|AEB30520.1| apurinic/apyrimidinic endonuclease [Carnobacterium sp. 17-4] Length = 253 Score = 174 bits (442), Expect = 9e-42, Method: Composition-based stats. Identities = 66/261 (25%), Positives = 111/261 (42%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA +E + D CLQETK ++ + + + Sbjct: 1 MKFISWNVNGLRAIVKKGFVEIFEELDADFFCLQETKLQEGQIELD-FPGYYDYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K++P+++ + + D + R I ++ + Sbjct: 60 KGYSGTAIFTKHKPLDVSYGIGKPEHDQEGRVITLSYPN-----YYVVTCYTPNSKSELK 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + D ++ W F + + L+ E+P+I GD N+ + D N + A F+ E R Sbjct: 115 RLDYRMQWEDDFQLYLKK-LDSEKPVILCGDLNVAHENIDLKNWKTNQLSAGFSKEERMK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F L + GF D R + Y++W+Y ++ N G RID+ +S L ARI Sbjct: 174 FSALLDAGFIDTFRYFYPDLEGAYTWWNYRFNARKTNAGWRIDYFCVSTRLQDHLQEARI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 G SDH PV + L Sbjct: 234 LDDIVG----SDHCPVELILK 250 >gi|190574562|ref|YP_001972407.1| putative exodeoxyribonuclease III protein [Stenotrophomonas maltophilia K279a] gi|190012484|emb|CAQ46112.1| putative EXODEOXYRIBONUCLEASE III PROTEIN [Stenotrophomonas maltophilia K279a] Length = 263 Score = 174 bits (442), Expect = 9e-42, Method: Composition-based stats. Identities = 89/259 (34%), Positives = 134/259 (51%), Gaps = 3/259 (1%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + +AT+NVN I R+ L W+ +PD++ LQE K D FP L+ Y G Sbjct: 5 KTLRIATFNVNGIGTRLPQLLDWLHRESPDVVALQELKATDAAFPAAALEQAGYGALWQG 64 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 + +NGVA+L++ + + +G LYLP+GNP Sbjct: 65 EARWNGVALLARGTMPVESRRRLPGEPKDTQS---RYLEAAVHGVIVGALYLPNGNPQPG 121 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 K+D K+ W++R +R A +EL P + GD+N+IP D Y+P W DA F EVR Sbjct: 122 PKFDYKLRWMERLIRHARSLVELPHPALLLGDFNVIPTDADVYDPKAWRRDALFQPEVRD 181 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +F++L G+TDA+R H +Y+FWDY+ +++G+RIDH++L+P L A + Sbjct: 182 AFERLLAQGWTDALRKVHGDATIYTFWDYFRQHAERDRGLRIDHLLLNPVLAERLKDAGV 241 Query: 242 DTKPRGWTKPSDHTPVIVS 260 D R K SDH P V+ Sbjct: 242 DRWVRLQEKASDHAPAWVT 260 >gi|121635738|ref|YP_975983.1| putative nuclease [Neisseria meningitidis FAM18] gi|120867444|emb|CAM11216.1| putative nuclease [Neisseria meningitidis FAM18] gi|254671914|emb|CBA04230.1| putative endonuclease [Neisseria meningitidis alpha275] gi|308390182|gb|ADO32502.1| exodeoxyribonuclease [Neisseria meningitidis alpha710] gi|325131323|gb|EGC54034.1| exodeoxyribonuclease III [Neisseria meningitidis M6190] gi|325133258|gb|EGC55924.1| exodeoxyribonuclease III [Neisseria meningitidis M13399] gi|325137352|gb|EGC59940.1| exodeoxyribonuclease III [Neisseria meningitidis ES14902] gi|325141356|gb|EGC63839.1| exodeoxyribonuclease III [Neisseria meningitidis 961-5945] gi|325143494|gb|EGC65815.1| exodeoxyribonuclease III [Neisseria meningitidis M01-240013] gi|325199171|gb|ADY94627.1| exodeoxyribonuclease III [Neisseria meningitidis G2136] gi|325206984|gb|ADZ02437.1| exodeoxyribonuclease III [Neisseria meningitidis M04-240196] Length = 259 Score = 174 bits (442), Expect = 9e-42, Method: Composition-based stats. Identities = 64/264 (24%), Positives = 120/264 (45%), Gaps = 13/264 (4%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ + + NVN IR+ +I + DI+C+QE K ++ + + H Sbjct: 1 MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADLSADMKNPHGMHGHWHC 60 Query: 62 --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 ++ Y+GVA+ SK +P + + ++ D + RF+ F L + +LYLP G+ Sbjct: 61 AEKRGYSGVAVYSKRKPDNVQIGMGIEEFDREGRFVRCDFD----RLSVISLYLPSGSSA 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K ++ F ++ GD+NI Q D N + ++ F E Sbjct: 117 EERQQV-KYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEE 175 Query: 180 RQSF-QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R+ + + +G+TD R + Y++W +++K+ G RID+ M++PE + S Sbjct: 176 REWIGKVIHKLGWTDMWRTLYPDVPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVS 235 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 A + K SDH P+++ D Sbjct: 236 AHVYKD----EKFSDHAPLVMEYD 255 >gi|239631265|ref|ZP_04674296.1| exonuclease III [Lactobacillus paracasei subsp. paracasei 8700:2] gi|239525730|gb|EEQ64731.1| exonuclease III [Lactobacillus paracasei subsp. paracasei 8700:2] Length = 252 Score = 174 bits (442), Expect = 9e-42, Method: Composition-based stats. Identities = 64/257 (24%), Positives = 108/257 (42%), Gaps = 12/257 (4%) Query: 4 VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + E + D CLQETK + + L + + + Sbjct: 1 MKLISWNVNGLRAVLKKEFMTIFNELDADWFCLQETKMQAGQVELD-LPGYHQYFNYAER 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K++P+ + + + D + R I + + Sbjct: 60 KGYSGTAIFTKHEPLNVTYGMGVPEHDTEGRIITLEYPNFYLMTVYTPNSGGELKRLDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + + +L ++PL++ GD N+ Q D N ++A FT E R Sbjct: 120 QQ------WDKDFLAYTNQLAAKKPLVYCGDLNVAHQEIDLKNDKTNHHNASFTDEERAD 173 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F K + GF D R + YS+W Y + + N G RID+ + S + + A+I Sbjct: 174 FTKQLDSGFIDTFRNLYPDTVTYSWWSYRFHARANNAGWRIDYFVSSRDFKPYIQDAKIL 233 Query: 243 TKPRGWTKPSDHTPVIV 259 T G SDH PV + Sbjct: 234 TDIMG----SDHCPVEL 246 >gi|296313703|ref|ZP_06863644.1| exodeoxyribonuclease III [Neisseria polysaccharea ATCC 43768] gi|296839722|gb|EFH23660.1| exodeoxyribonuclease III [Neisseria polysaccharea ATCC 43768] Length = 259 Score = 174 bits (442), Expect = 9e-42, Method: Composition-based stats. Identities = 64/264 (24%), Positives = 119/264 (45%), Gaps = 13/264 (4%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ + + NVN IR+ +I + DI+C+QE K ++ + + H Sbjct: 1 MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADLSADMKNPHGMHGYWHC 60 Query: 62 --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 ++ Y+GVA+ K +P + + ++ D + RF+ F L + +LYLP G+ Sbjct: 61 AEKRGYSGVAVYGKRKPDNVQIGMGIEEFDREGRFVRCDFG----RLSVISLYLPSGSSA 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K ++ F ++ GD+NI Q D N + ++ F E Sbjct: 117 EERQQV-KYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEE 175 Query: 180 RQSF-QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R+ + + +G+TD R + + Y++W +++K+ G RID+ M++PE S Sbjct: 176 REWIGKVIHKLGWTDMWRTLYPDNPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAVKAVS 235 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 A + K SDH P++V D Sbjct: 236 AHVYKD----EKFSDHAPLVVEYD 255 >gi|167004926|ref|ZP_02270684.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni 81-176] Length = 252 Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats. Identities = 62/262 (23%), Positives = 97/262 (37%), Gaps = 12/262 (4%) Query: 4 VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA N WI + D I QE K + FP + + H+ Sbjct: 1 MKLLSWNVNGLRAICDKNALDWIAQEKIDFIGFQEIKAHEDKFPKKIYEYPFKHMYFNSA 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K ++S V D + I + N Sbjct: 61 KRAGYSGVMSLCNFDSEVKKCEFFDDEEGRVLEHRFKNIALFNIYFPN------GQKDEE 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + K+ + FL + + L+ +I GD N + D +P N + F R Sbjct: 115 RLNFKMKFYADFLVYLDKLLKDGFEIIICGDVNTAHKEIDLTHPKANANTSGFLPIERAW 174 Query: 183 FQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 L +GF D R + + YS+W Y + +N G RID+ +S L +A I Sbjct: 175 IDDLLKLGFIDTFREINGEIKEKYSWWSYRMKARERNVGWRIDYFFISKGLKDKLKNAFI 234 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 G SDH PV + +DI Sbjct: 235 RDDIFG----SDHAPVGIEIDI 252 >gi|304388714|ref|ZP_07370772.1| exodeoxyribonuclease III [Neisseria meningitidis ATCC 13091] gi|304337278|gb|EFM03454.1| exodeoxyribonuclease III [Neisseria meningitidis ATCC 13091] Length = 259 Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats. Identities = 64/264 (24%), Positives = 120/264 (45%), Gaps = 13/264 (4%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ + + NVN IR+ +I + DI+C+QE K ++ + + H Sbjct: 1 MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADLSADMKNPHGMHGHWHC 60 Query: 62 --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 ++ Y+GVA+ SK +P + + ++ D + RF+ F L + +LYLP G+ Sbjct: 61 AEKRGYSGVAVYSKRKPDNVQIGMGIEEFDREGRFVRCDFG----RLSVISLYLPSGSSA 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K ++ F ++ GD+NI Q D N + ++ F E Sbjct: 117 EERQQV-KYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEE 175 Query: 180 RQSF-QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R+ + + +G+TD R + Y++W +++K+ G RID+ M++PE + S Sbjct: 176 REWIGKVIHKLGWTDMWRTLYPDVPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKALS 235 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 A + K SDH P+++ D Sbjct: 236 AHVYKD----EKFSDHAPLVMEYD 255 >gi|332024107|gb|EGI64323.1| Recombination repair protein 1 [Acromyrmex echinatior] Length = 356 Score = 174 bits (442), Expect = 1e-41, Method: Composition-based stats. Identities = 74/263 (28%), Positives = 119/263 (45%), Gaps = 13/263 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFET-LQSLNYHIETCG 61 + + TWNV+ IRA I + +I + + DII LQETK + P E L +++ Sbjct: 104 LKICTWNVSGIRAVIKKHGLDYITKEDADIIALQETKCDKGKMPDEVKLPGYHHYFLDSK 163 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 + Y GVA+ SK +PI + L D + R I F + I G + + Sbjct: 164 KPGYCGVALFSKEKPISVKYGLNDSTFDTEGRIITVEFP---EFFVINVYVPNAGQKLVT 220 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + + + + L+ ++P+I GD N+ Q D NP +A FT E R Sbjct: 221 LPKRLEWNKLFKKHIEE---LDQKKPVIICGDMNVAHQEIDLKNPKTNTKNAGFTKEERN 277 Query: 182 SFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 GF D R+ + Y+FW Y+A++ SKN G R+D+ ++S + + Sbjct: 278 DMTDFLAAGFIDTFRSLYPEIEGAYTFWSYFANARSKNIGWRLDYFLISERIKNKVCDNI 337 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263 I G SDH PVI+ +++ Sbjct: 338 IRKDVYG----SDHCPVILYINL 356 >gi|149278217|ref|ZP_01884355.1| exodeoxyribonuclease III [Pedobacter sp. BAL39] gi|149230983|gb|EDM36364.1| exodeoxyribonuclease III [Pedobacter sp. BAL39] Length = 256 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 75/264 (28%), Positives = 123/264 (46%), Gaps = 14/264 (5%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFET--LQSLNYHIETC 60 + + ++NVN IR+ N W++ + D++CLQE K P ++ L YH Sbjct: 1 MKIISYNVNGIRSASTKNFLGWLQAMDADMVCLQEVKALPSQIPELLVLIEQLGYHHYWF 60 Query: 61 G--QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 +K Y+GVAIL++ +P + + +D + R + A F + +LY+P G+ Sbjct: 61 PAEKKGYSGVAILTRIKPNHVEYGCGEEWIDKEGRILRADFDT----FSLMSLYMPSGS- 115 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + K +++ F + Q + LI +GDYNI D +NP N + F E Sbjct: 116 SGDERQTKKYEFMRFFDTYTEQLRKEIPNLIISGDYNICHTAIDIHNPKSNANSSGFLPE 175 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R+ + N GF D R + H Y++W + A S SKN G RID+ + + L + Sbjct: 176 EREWMELFLNNGFIDTFRHFNKDPHHYTWWSFRAGSRSKNLGWRIDYHLATVPMLDRLKN 235 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 I SDH PV++ L+ Sbjct: 236 VTILADA----VHSDHCPVLLELN 255 >gi|116494506|ref|YP_806240.1| exonuclease III [Lactobacillus casei ATCC 334] gi|191637944|ref|YP_001987110.1| Exodeoxyribonuclease III [Lactobacillus casei BL23] gi|227535523|ref|ZP_03965572.1| exodeoxyribonuclease III [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|116104656|gb|ABJ69798.1| Exonuclease III [Lactobacillus casei ATCC 334] gi|190712246|emb|CAQ66252.1| Exodeoxyribonuclease III [Lactobacillus casei BL23] gi|227186845|gb|EEI66912.1| exodeoxyribonuclease III [Lactobacillus paracasei subsp. paracasei ATCC 25302] gi|327382014|gb|AEA53490.1| Exodeoxyribonuclease III [Lactobacillus casei LC2W] gi|327385172|gb|AEA56646.1| Exodeoxyribonuclease III [Lactobacillus casei BD-II] Length = 252 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 64/257 (24%), Positives = 108/257 (42%), Gaps = 12/257 (4%) Query: 4 VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + E + D CLQETK + + L + + + Sbjct: 1 MKLISWNVNGLRAVLKKDFMTIFNELDADWFCLQETKMQAGQVELD-LPGYHQYFNYAER 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K++P+ + + + D + R I + + Sbjct: 60 KGYSGTAIFTKHEPLNVTYGMGVPEHDTEGRIITLEYPNFYLMTVYTPNSGGELKRLDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + + +L ++PL++ GD N+ Q D N ++A FT E R Sbjct: 120 QQ------WDKDFLAYTNQLAAKKPLVYCGDLNVAHQEIDLKNDKTNHHNAGFTDEERAD 173 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F K + GF D R + YS+W Y + + N G RID+ + S + + A+I Sbjct: 174 FTKQLDSGFIDTFRNLYPDTVTYSWWSYRFHARANNAGWRIDYFVSSRDFKPYIQDAKIL 233 Query: 243 TKPRGWTKPSDHTPVIV 259 T G SDH PV + Sbjct: 234 TDIMG----SDHCPVEL 246 >gi|300692854|ref|YP_003753849.1| exodeoxyribonuclease III/endonuclease/phosphatase [Ralstonia solanacearum PSI07] gi|299079914|emb|CBJ52591.1| putative exodeoxyribonuclease III/endonuclease/phosphatase [Ralstonia solanacearum PSI07] Length = 261 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 58/264 (21%), Positives = 112/264 (42%), Gaps = 12/264 (4%) Query: 3 VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IET 59 ++ + + N+N +R A W+ + + D +C+QE K + E L YH + Sbjct: 1 MLRIISANLNGVRSAASKGFFDWMGKQDADFVCVQELKCAQDDMTPEFLAPHGYHGVFQH 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G + ++++P +++ G + D + R++EA + L I ++Y+P G+ Sbjct: 61 AVKKGYSGAGLYARHKPDDVIVGFDGGEFDAEGRYVEARYG----KLSIISVYVPSGSSG 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + R E ++ GD NI+ + D N + ++ E Sbjct: 117 EERQQAKYRFMDLFMQHLVDLRHEKGREVVLCGDVNIVHKEIDIKNWKGNQKNSGCLPEE 176 Query: 180 RQSFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R +L + G+ D R Y++W +++KN G RID+ + +P + Sbjct: 177 RAWLTRLFDEVGYVDVFRTLDPRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGIATTARR 236 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 + K SDH P+ V D Sbjct: 237 TSVFKDI----KFSDHAPLTVDYD 256 >gi|220930682|ref|YP_002507591.1| exodeoxyribonuclease III Xth [Clostridium cellulolyticum H10] gi|220001010|gb|ACL77611.1| exodeoxyribonuclease III Xth [Clostridium cellulolyticum H10] Length = 253 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 70/263 (26%), Positives = 120/263 (45%), Gaps = 13/263 (4%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFE-TLQSLNYHIETC 60 + + +WNVN +RA I + KE + DI C+QETK ++ E L+ + Sbjct: 1 MTKLVSWNVNGLRACIGKGFWDFFKEVDSDIFCIQETKLQEGQVELEQELEGYEQYWNYA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+G AI +K +P+ + ++ D + R I F + Sbjct: 61 VKKGYSGTAIFTKIKPVSSSCGIGIEEHDNEGRVITLEFDQ-----YFLVNVYTPNSKRE 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + + ++ W F + Q LE +P+I GD N+ + D NP + A FT+E R Sbjct: 116 LERLEYRMKWEDDFRIYLKQ-LEETKPVIICGDMNVAHKEIDIKNPRSNKRSAGFTMEER 174 Query: 181 QSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + F +L GF D+ R + Y++W Y + +N G RID+ +S +++ A Sbjct: 175 EKFSELLEQGFVDSYRTLYPDKTGAYTWWSYMFKARERNVGWRIDYFCVSEVLKNIIEEA 234 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 I ++ G SDH PV +++ Sbjct: 235 DIYSEIMG----SDHCPVGLTIK 253 >gi|116333326|ref|YP_794853.1| exonuclease III [Lactobacillus brevis ATCC 367] gi|116098673|gb|ABJ63822.1| Exonuclease III [Lactobacillus brevis ATCC 367] Length = 254 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 65/259 (25%), Positives = 108/259 (41%), Gaps = 13/259 (5%) Query: 4 VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA +E N D +QETK + + L + + Sbjct: 1 MKFISWNVNGLRAIVKKGFVETFQELNADFFGIQETKLQAGQIELD-LPGYYQYWNYAER 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G A+ +K+QP+ ++ + + D + R I + + G+ + Sbjct: 60 KGYSGTALFTKHQPLNVIYGIDAPEFDHEGRAITLEYP---DFYVLTCYTPNSGSGLKRL 116 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + Q+L+ ++P+IF GD N+ D NP ++A FT E R Sbjct: 117 DFR---LGWEHAFLTFIQKLDAQKPVIFCGDLNVAHTEIDLKNPKTNHHNAGFTDEERAK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 L G+TD R + YS+W Y + N G RID+ + S + L A+I Sbjct: 174 MTALLAAGYTDTFRYFNPDVTERYSWWSYRFHARDNNAGWRIDYFITSQRLQNHLQDAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVS 260 + G SDH PV + Sbjct: 234 LDQIMG----SDHCPVELD 248 >gi|307324263|ref|ZP_07603471.1| exodeoxyribonuclease III Xth [Streptomyces violaceusniger Tu 4113] gi|306889994|gb|EFN20972.1| exodeoxyribonuclease III Xth [Streptomyces violaceusniger Tu 4113] Length = 282 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 57/262 (21%), Positives = 94/262 (35%), Gaps = 6/262 (2%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 V+TV T NVN +RA W+ D++CLQE + E K P + +H+ Sbjct: 16 VLTVTTVNVNGLRAAAKKGFGPWLDATAADVVCLQEVRAEPKELPEAVREPDGWHVVHAP 75 Query: 62 Q--KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 K GV++ ++ + + + D R++E T + G Sbjct: 76 AAAKGRAGVSVYARRELEGVRVGFGSSEFDGSGRYVEVDLPGVTVG-SLYLPSGEVGTDR 134 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K ++ + + AGD+NI Q D N + + F E Sbjct: 135 QDEKERFMAEFLPYLKELRERAAAGGREALVAGDWNIAHQEADLKNWKANQKKSGFLPEE 194 Query: 180 RQSFQKLQNM--GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 R + D YS+W Y ++ + G RID+ + +P Sbjct: 195 RAWLTSVFEEAGYVDVVRALHPDVAGPYSWWSYRGRAFDNDAGWRIDYQIATPGLAGRAV 254 Query: 238 SARIDTKPRGWTKPSDHTPVIV 259 A ++ P + SDH PV V Sbjct: 255 KAVVERAPAYDQRWSDHAPVTV 276 >gi|296532202|ref|ZP_06894954.1| exodeoxyribonuclease III [Roseomonas cervicalis ATCC 49957] gi|296267473|gb|EFH13346.1| exodeoxyribonuclease III [Roseomonas cervicalis ATCC 49957] Length = 268 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 67/269 (24%), Positives = 100/269 (37%), Gaps = 7/269 (2%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIET 59 M + + TWN+NS+R R+ L ++E PD++CLQETK D+ FP E L +L Y H Sbjct: 1 MPNLRLLTWNINSVRLRMPLLTRLVQELEPDVVCLQETKCPDELFPHEPLAALGYAHRAV 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 G K YNG AILS+ L + G+ Sbjct: 61 RGMKGYNGTAILSRLPFAPRQDDPDWCAKGDCRHVGVDLDVPGGLELHDFYVP-AGGDIA 119 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL 177 + + GD NI P D ++ + T Sbjct: 120 DREANPKFAHKLDFVAEATAWNAARGPAKRAVMVGDLNIAPLECDVWSHRQLLDVVSHTP 179 Query: 178 EVRQS--FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATS 234 + + +Y++W Y A W ++G R+DH+ +S + Sbjct: 180 VEVAALTAWQQAGAWHDAIRHFVPPPEKVYTWWSYRARDWEASDRGRRLDHVWVSQDLAG 239 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 L I RGWT+ SDH PV+V L + Sbjct: 240 SLRRHHIHKAARGWTQASDHVPVLVELAL 268 >gi|227512799|ref|ZP_03942848.1| exodeoxyribonuclease III [Lactobacillus buchneri ATCC 11577] gi|227083999|gb|EEI19311.1| exodeoxyribonuclease III [Lactobacillus buchneri ATCC 11577] Length = 252 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 67/258 (25%), Positives = 112/258 (43%), Gaps = 13/258 (5%) Query: 4 VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + A ++ + D C+QETK ++ + L + + Sbjct: 1 MKFISWNVNGLRAVVKKDFAEIFQKLDADFFCIQETKMQEGQLKLD-LPGYRQYFNYAER 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +P+ + + + D + R I + + + G + Sbjct: 60 KGYSGTAIFAKDEPLTVSYGIQAPEFDHEGRAITLEYP---NFYLVTSYVPNSGAKLKRL 116 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + +L+ +P+I GD N+ D NP ++A FT E RQS Sbjct: 117 DFR---MGWDKAFHAYLNQLDSHKPVILCGDLNVAHYEIDLKNPQSNHHNAGFTDEERQS 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F KL + GF D R + +YS+W Y S +N G RID+ + S + ++I Sbjct: 174 FTKLLDQGFMDTFRHFYPDKEDIYSWWSYRFHSRDRNAGWRIDYFVTSKRLADHISDSKI 233 Query: 242 DTKPRGWTKPSDHTPVIV 259 T G SDH PV + Sbjct: 234 LTDIFG----SDHCPVEL 247 >gi|163757409|ref|ZP_02164498.1| putative exodeoxyribonuclease iii protein [Hoeflea phototrophica DFL-43] gi|162284911|gb|EDQ35193.1| putative exodeoxyribonuclease iii protein [Hoeflea phototrophica DFL-43] Length = 270 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 66/265 (24%), Positives = 103/265 (38%), Gaps = 8/265 (3%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64 V TWN+NS+R R+ + ++ PD++CLQETK + FP + + Y H+ GQK Sbjct: 5 VTTWNINSVRLRLPLVQHLLETVQPDVLCLQETKCPNDAFPSAAFRKIGYEHMAIHGQKG 64 Query: 65 YNGVAILSK----YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 Y+GVAILS+ + I + I Sbjct: 65 YHGVAILSRLPLSDDQRLSYCGIADARHVSAVVEAPGERRIRLHNFYVPAGGDEPNRDIN 124 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + A L+ I GD NI P D ++ T Sbjct: 125 PKFGHKLDFIEEMRGLHAESELKDGISSILVGDLNIAPLETDVWSHKQLLKVVSHTPVET 184 Query: 181 QSFQKLQNMGFTDAIRATH--DTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLLH 237 ++ +Q G + TH ++++W Y A W + ++G R+DH+ S + L Sbjct: 185 ENLTGMQQGGAWVDLIRTHIPPEEKVFTWWSYRAKDWAAADRGRRLDHVWSSADLADGLS 244 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLD 262 + + RGW +PSDH PV D Sbjct: 245 KIEVLREARGWERPSDHVPVTAHFD 269 >gi|134093450|ref|YP_001098525.1| putative nuclease [Herminiimonas arsenicoxydans] gi|133737353|emb|CAL60396.1| Putative Nuclease [Herminiimonas arsenicoxydans] Length = 259 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 60/265 (22%), Positives = 113/265 (42%), Gaps = 15/265 (5%) Query: 3 VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59 ++ + + N+N IR A W+ ++ D IC+QE K ++ + + L Y + Sbjct: 1 MLKIVSANLNGIRSAAKKGFFQWMARHSADYICVQELKAQEADMTPDFLTPEGYFGYFHY 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G + K +P + + D + R+++ F L + ++Y P G+ Sbjct: 61 AEKKGYSGAGVYCKTKPDNVQIGFNCPEFDAEGRYVQCDFG----NLSVISVYCPSGS-S 115 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K ++ FL + + GD+NI D N ++ F E Sbjct: 116 GEERQQAKFRFMDVFLPHLLELKSQGREFVICGDWNIAHNEIDLKNYKGNRKNSGFLPEE 175 Query: 180 RQSFQKLQNM-GFTDAIRATHD--THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 R+ ++ + G D R H T Y++W +++KN G RID+ + +P + Sbjct: 176 REWLTRVFDEVGLVDVYRRLHPGTTEECYTWWSNRGQAYAKNVGWRIDYQVATPSLAARA 235 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSL 261 H+A I R SDH P+ ++ Sbjct: 236 HAAEIYKVER----FSDHAPLTITY 256 >gi|134095562|ref|YP_001100637.1| putative exodeoxyribonuclease III [Herminiimonas arsenicoxydans] Length = 237 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 91/242 (37%), Positives = 133/242 (54%), Gaps = 5/242 (2%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80 + W+ +N D++CLQETKT D+ FP +++ Y + GQK+YNGVAILS++ ++ Sbjct: 1 MQQWLVDNPVDVLCLQETKTVDEKFPVAEIEAAGYQVAFTGQKTYNGVAILSRHPITDVT 60 Query: 81 THLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQ 140 + P D + Q Q +RI Y+P+G S KY K++W+K + +Q Sbjct: 61 KNNPLLDDEQQRII-----AGTIQGIRIVCAYVPNGQSPDSDKYIYKLNWLKALHEWLAQ 115 Query: 141 RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHD 200 + L GDYNI P+ D ++P W + R +F +LQ MGFTDA R Sbjct: 116 EQQQHPELALLGDYNIAPEDRDVHDPAAWAGQVLVSEPERAAFVRLQEMGFTDAFRMFEQ 175 Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 LYS+WDY + N+G+RIDHI+LS + + ID PR W +PSDHTPVI + Sbjct: 176 PEKLYSWWDYRQMGFRLNRGLRIDHILLSAPLAARCSACVIDKVPRKWEQPSDHTPVIAT 235 Query: 261 LD 262 +D Sbjct: 236 ID 237 >gi|254671628|emb|CBA09333.1| putative endonuclease [Neisseria meningitidis alpha153] Length = 259 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 64/264 (24%), Positives = 120/264 (45%), Gaps = 13/264 (4%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ + + NVN IR+ +I + DI+C+QE K ++ + + H Sbjct: 1 MLKIISANVNGIRSAYKKGFYEYIATSGADIVCVQELKAQEADLSADMKNPHGMHGHWHC 60 Query: 62 --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 ++ Y+GVA+ SK +P + + ++ D + RF+ F L + +LYLP G+ Sbjct: 61 AEKRGYSGVAVYSKRKPDNVQIGMGIEEFDREGRFVRCDFD----RLSVISLYLPSGSSA 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K ++ F ++ GD+NI Q D N + ++ F E Sbjct: 117 EERQQV-KYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEE 175 Query: 180 RQSF-QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R+ + + +G+TD R + Y++W +++K+ G RID+ M++PE + S Sbjct: 176 REWIGKVIHKLGWTDMWRTLYPDVPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVS 235 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 A + K SDH P+++ D Sbjct: 236 AHVYKD----EKFSDHAPLVMEYD 255 >gi|206895175|ref|YP_002247534.1| exodeoxyribonuclease III [Coprothermobacter proteolyticus DSM 5265] gi|206737792|gb|ACI16870.1| exodeoxyribonuclease III [Coprothermobacter proteolyticus DSM 5265] Length = 250 Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats. Identities = 78/258 (30%), Positives = 132/258 (51%), Gaps = 13/258 (5%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + VAT+NVN IRAR+ +++ ++ PD++CLQE K E+ FP++ + Y GQK Sbjct: 1 MKVATFNVNGIRARLDSISELMQMEAPDVLCLQEIKCENDLFPYDFFKD--YQCYVNGQK 58 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +YNGV+I S+ + + + V T + I N+Y PHG+ S + Sbjct: 59 AYNGVSICSRKEGV---------PVVVLEEVESRTLGLVLGDTLIVNVYAPHGDLRGSPR 109 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + KI W K F + + L ++ GD+NI + +D ++PI+ ++ E R++ Sbjct: 110 FFQKIQWYKAFSKRMEELLRRYPKVLIVGDFNIALKDNDVWDPILLKDTVGTFPEEREAL 169 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + L ++GF D RA + +++WDY KN+G+RID++ S + + Sbjct: 170 KALLSVGFVDVFRAIYPEKVQFTWWDYRQGRMWKNQGMRIDYVFSSETLMPSIEDVYVVE 229 Query: 244 KPRGW--TKPSDHTPVIV 259 + R KPSDH PV+ Sbjct: 230 EIRKRRNPKPSDHAPVVC 247 >gi|114329634|gb|ABI58270.1| exodeoxyribonuclease [Streptomyces coelicolor A3(2)] Length = 267 Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 51/267 (19%), Positives = 99/267 (37%), Gaps = 8/267 (2%) Query: 3 VVTVATWNVNSI-RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++TV + NVN + A W+ + D++CLQE + E P +H+ Sbjct: 1 MLTVTSVNVNGLLAAAKKGFVEWLAGTSADVLCLQEVRAEPHQLPDHAGAPEGWHVTHAP 60 Query: 62 Q--KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 K GV++ ++ +P + + D R++EA T + G Sbjct: 61 AAAKGRAGVSLYTRREPDAVRVGFGSTEFDTSGRYVEADLPGVTVA-SLYLPSGEVGTER 119 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K ++ + ++ GD+NI + D N + ++ F E Sbjct: 120 QDEKVRFMGEFLAYLKELRERAAAQGREVVVCGDWNIAHREADLKNWRANKKNSGFLPEE 179 Query: 180 RQSFQKLQNMGFTDAIRA----THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 R+ ++ + + D YS+W Y ++ + G RID+ + +P + Sbjct: 180 REWLGRVLDPAEGGYVDVVRALHPDVEGPYSWWSYRGRAFGNDAGWRIDYHVSTPGLAAK 239 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262 ++ + SDH PV V + Sbjct: 240 AVKGYVERAATHAERWSDHAPVTVVYN 266 >gi|227522924|ref|ZP_03952973.1| exodeoxyribonuclease III [Lactobacillus hilgardii ATCC 8290] gi|227089953|gb|EEI25265.1| exodeoxyribonuclease III [Lactobacillus hilgardii ATCC 8290] Length = 252 Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 67/258 (25%), Positives = 112/258 (43%), Gaps = 13/258 (5%) Query: 4 VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + A ++ + D C+QETK ++ + L + + Sbjct: 1 MKFISWNVNGLRAVVKKDFAEIFQKLDADFFCIQETKMQEGQLKLD-LPGYRQYFNYAER 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +P+ + + + D + R I + + + G + Sbjct: 60 KGYSGTAIFAKDEPLTVSYGIQAPEFDHEGRAITLEYP---NFYLVTSYVPNSGAKLKRL 116 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + +L+ +P+I GD N+ D NP ++A FT E RQS Sbjct: 117 DFR---MGWDKAFHAYLNQLDSHKPVILCGDLNVAHHEIDLKNPQSNHHNAGFTDEERQS 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F KL + GF D R + +YS+W Y S +N G RID+ + S + ++I Sbjct: 174 FTKLLDQGFMDTFRHFYPDKEDIYSWWSYRFHSRDRNAGWRIDYFVTSKRLADHISDSKI 233 Query: 242 DTKPRGWTKPSDHTPVIV 259 T G SDH PV + Sbjct: 234 LTDIFG----SDHCPVEL 247 >gi|84687987|ref|ZP_01015851.1| exodeoxyribonuclease III, putative [Maritimibacter alkaliphilus HTCC2654] gi|84664019|gb|EAQ10519.1| exodeoxyribonuclease III, putative [Rhodobacterales bacterium HTCC2654] Length = 262 Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 83/268 (30%), Positives = 120/268 (44%), Gaps = 11/268 (4%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIET 59 MS T+ATWN+NS+R R ++ + + PD++CLQE K+ P + ++ Y H+ Sbjct: 1 MS-FTLATWNINSVRLRADLVSRLLADEAPDVLCLQECKSPVDKIPHDIFKARGYTHMVA 59 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 GQK YNGVAILSK + GD + + I N Y+P G Sbjct: 60 RGQKGYNGVAILSKLPLED-----AGDQDFARLGHARHIAAKLENGVTIHNFYVPAGGDK 114 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL 177 + ++K +L E+P GD NI P+ D +N T Sbjct: 115 PDREINEKFGQKLDYLTEMRDWFHAEKPEKAILVGDLNIAPREDDVWNHKQLLKIVSHTP 174 Query: 178 -EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSL 235 EV + D R LYS+W Y + W +KG R+DHI +P+ ++ Sbjct: 175 VEVEHLGAAQDAGKWVDITRQDIPEGLLYSWWSYRSPDWDTADKGRRLDHIWATPDISNA 234 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 H +RI RGW KPSDH PV + D+ Sbjct: 235 AHGSRILRDVRGWEKPSDHAPVFATFDL 262 >gi|222823091|ref|YP_002574664.1| exodeoxyribonuclease III [Campylobacter lari RM2100] gi|222538312|gb|ACM63413.1| exodeoxyribonuclease III [Campylobacter lari RM2100] Length = 252 Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 64/262 (24%), Positives = 98/262 (37%), Gaps = 12/262 (4%) Query: 4 VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA N WI++ N D I QE K ++ FP + H+ Sbjct: 1 MKLLSWNVNGLRAICDKNALDWIEKENIDFIGFQEIKAHEEKFPKRIYEYDFKHMYFNSA 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K ++S D D I + N Sbjct: 61 KRAGYSGVMSLLNFDCETKKCEFFDDDEGRVLEHRFKNIALFNIYFPN------GQKDEE 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + K+ + FL + + L+ + +I GD N + D +P E + F R Sbjct: 115 RLSFKMKFYNDFLVYLDKLLKEGKEIIICGDVNTAHREIDLTHPKANEKTSGFLPIERAW 174 Query: 183 FQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 L +GF D R + D YS+W Y + +N G RID+ +S L +A I Sbjct: 175 IDDLLELGFVDTFRYVNGDIKEKYSWWSYRMKARERNVGWRIDYFFISNGLKDKLKNAFI 234 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 G SDH PV + +DI Sbjct: 235 RDDIFG----SDHAPVGIEIDI 252 >gi|86151219|ref|ZP_01069434.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni 260.94] gi|315123837|ref|YP_004065841.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|85841566|gb|EAQ58813.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni 260.94] gi|315017559|gb|ADT65652.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 252 Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats. Identities = 60/262 (22%), Positives = 97/262 (37%), Gaps = 12/262 (4%) Query: 4 VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA N WI + D I QE K + FP + + H+ Sbjct: 1 MKLLSWNVNGLRAICDKNALDWIAQEKIDFIGFQEIKAHEDKFPKKIYEYPFKHMYFNSA 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K ++S V + + I + N Sbjct: 61 KRAGYSGVMSLCNFDSEVKKCEFFNDEEGRVLEHRFKNIALFNIYFPN------GQKDEE 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + K+ + FL + + L+ +I GD N + D +P N + F R Sbjct: 115 RLNFKMKFYADFLVYLDKLLKDGFEIIICGDVNTAHKEIDLTHPKANANTSGFLPIERAW 174 Query: 183 FQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 L +GF D R + + YS+W Y + +N G RID+ +S L +A I Sbjct: 175 IDDLLKLGFIDTFREINGEIKEKYSWWSYRMKARERNVGWRIDYFFISKGLKDKLKNAFI 234 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 G SDH P+ + +DI Sbjct: 235 RDDIFG----SDHAPIGIEIDI 252 >gi|108762443|ref|YP_632150.1| exodeoxyribonuclease III [Myxococcus xanthus DK 1622] gi|108466323|gb|ABF91508.1| exodeoxyribonuclease III [Myxococcus xanthus DK 1622] Length = 260 Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 70/262 (26%), Positives = 111/262 (42%), Gaps = 9/262 (3%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60 + V +WNVN +R+ W+ ++ LQE + P + + H Sbjct: 1 MRVVSWNVNGLRSVHRKGFLPWLAGCRAQVVGLQEVRARADQLPDDVRSPSRWKTHFVAA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + Y+GV + S+ +P E+VT L +LDV+ R A F T + G +G Sbjct: 61 ERPGYSGVGLYSRLEPDEVVTVLGVGELDVEGRLQIARFGKLT--VVNGYFPNGNGKDRD 118 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 ++ K+++ +R + L ++ GD+N Q D P + F E R Sbjct: 119 LSRIPYKLTFYRRLFERLEKPLRDGGRVLVMGDFNTAHQEIDLARPKENRETSGFRPEER 178 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + F + G+ D R + YS+W A KN G RID+++ SP A + + A Sbjct: 179 EEFDRWIRAGWVDTFRHFNKGGGNYSWWSQRAGVREKNIGWRIDYVLASPAAMAYVRKAG 238 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I G SDH PV V LD Sbjct: 239 IHPDVLG----SDHCPVSVDLD 256 >gi|207727621|ref|YP_002256015.1| exodeoxyribonuclease III protein [Ralstonia solanacearum MolK2] gi|206590860|emb|CAQ56472.1| exodeoxyribonuclease III protein [Ralstonia solanacearum MolK2] Length = 261 Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 60/264 (22%), Positives = 112/264 (42%), Gaps = 12/264 (4%) Query: 3 VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IET 59 ++ + + N+N +R A W+ + + D +C+QE K + E L YH + Sbjct: 1 MLRIISANLNGVRSAASKGFFDWMGKQDADFVCVQELKCAQDDMTPEFLAPHGYHGVFQH 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G + +++QP +++ G + D + R++EA + L I ++Y+P G+ Sbjct: 61 AVKKGYSGAGLYARHQPDDVIVGFDGGEFDAEGRYVEARYG----KLSIISVYVPSGSSG 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + R E ++ GD NI+ + D N + ++ E Sbjct: 117 EERQQAKYRFMDLFMQHLVDLRHEKGREIVLCGDVNIVHKEIDIKNWKGNQKNSGCLPEE 176 Query: 180 RQSFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R +L + G+ D R Y++W +++KN G RID+ + +P + Sbjct: 177 RAWLTRLFDEVGYVDVFRTLDTRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGIAATARR 236 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 I K SDH P+ V D Sbjct: 237 TSIFRDI----KFSDHAPLTVDYD 256 >gi|133712474|gb|ABO37085.1| ExoA [Treponema paraluiscuniculi] Length = 264 Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 57/267 (21%), Positives = 100/267 (37%), Gaps = 20/267 (7%) Query: 5 TVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQS---------LN 54 + +WNVN IRA + +W+ PD++CLQE K + Sbjct: 6 RIISWNVNGIRAIERXDFLSWLAREAPDVLCLQEIKAHESQLSAALRAPVWSAGAGGTYY 65 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 + + + Y+G A+ SK P + + + N Sbjct: 66 TYFHSAQRPGYSGTALFSKRAPDAVRFFGVPAFDCEGRMLAARFGELTVVSAYFPNAQ-- 123 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 + K+ + F F + + +I GDYNI + D +P E + Sbjct: 124 ----EGGKRLAYKLDFCAAFRAFCDEERTAGQHVILCGDYNIAHKEIDLAHPQENEGNPG 179 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 F + R G+ D+ RA Y++W Y A + ++N G RID+ + + Sbjct: 180 FLPQERAWMDTFTEAGYADSFRAFCTEGQQYTWWSYRARARARNIGWRIDYQCVDQAFLA 239 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261 + S++I ++ G SDH PV ++ Sbjct: 240 RVTSSQILSEVTG----SDHCPVCLTY 262 >gi|83950914|ref|ZP_00959647.1| exodeoxyribonuclease III, putative [Roseovarius nubinhibens ISM] gi|83838813|gb|EAP78109.1| exodeoxyribonuclease III, putative [Roseovarius nubinhibens ISM] Length = 262 Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 84/263 (31%), Positives = 118/263 (44%), Gaps = 10/263 (3%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64 +ATWN+NS+R R + + E PD++CLQE K+ + P Q L Y H+ GQK Sbjct: 5 LATWNINSVRLREPIVCKLLAEEGPDVLCLQECKSPVEKIPTAAFQELGYHHMIARGQKG 64 Query: 65 YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124 YNGVAILSK ++ GD + I N Y+P G + Sbjct: 65 YNGVAILSKLPIEDV-----GDRDFAALGHARHVAGRLENGVTIHNFYVPAGGDVPDRAV 119 Query: 125 DDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL-EVRQ 181 ++K +L E P GD NI P+ D +N T EV Sbjct: 120 NEKFGQKLDYLTEMRDWFHAERPEKSILVGDLNIAPREDDVWNHKQLLKVVSHTPVEVEH 179 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHSAR 240 + + ++D RA LYS+W Y A W +KG R+DH+ +P+ + HS+R Sbjct: 180 FNEVMDAGQWSDVTRADIPEGLLYSWWSYRARDWDVADKGRRLDHVWATPDIRNAAHSSR 239 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263 + RGW KPSDH PV D+ Sbjct: 240 VLRDARGWEKPSDHAPVFAHFDL 262 >gi|88798725|ref|ZP_01114308.1| exodeoxyribonuclease III [Reinekea sp. MED297] gi|88778488|gb|EAR09680.1| exodeoxyribonuclease III [Reinekea sp. MED297] Length = 274 Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 79/272 (29%), Positives = 130/272 (47%), Gaps = 11/272 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL-NYHIETCGQ 62 + + ++N+N IRAR+H L ++PDI+ LQE K +P E + + + GQ Sbjct: 1 MKIISFNINGIRARLHQLEELKATHDPDILSLQEIKVHSDLYPHEAVAAASGLVSQVHGQ 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121 K+++GVA LS+ + D + + T + + L + N Y P G Sbjct: 61 KAHHGVATLSRQPVPAEYGFPTDVEDDQRRLIVTRHPTADGRELVVINGYFPQGESNKHA 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175 TK+ K + L + + ++ LI GD+NI P D + E + F Sbjct: 121 TKWPAKRKFYADLLTWLETHAKPDDLLIVLGDFNIAPVDEDIGIGEKNAKRWLREGKSAF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHL-YSFWDYYADSWSKN--KGIRIDHIMLSPEA 232 E R+ F+KL+ G D+ R + +S++DY + + + +G+RIDH+M++ Sbjct: 181 LPEEREWFEKLRAWGLVDSYRHLYPDSTELFSWFDYRSKGFDDDPKRGLRIDHLMITEPL 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 L+ SA ID RG KPSDH P + LD+P Sbjct: 241 VPLIQSAGIDYHIRGMDKPSDHAPAWLELDLP 272 >gi|291333503|gb|ADD93201.1| exodeoxyribonuclease III [uncultured archaeon MedDCM-OCT-S08-C282] Length = 259 Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 63/264 (23%), Positives = 109/264 (41%), Gaps = 9/264 (3%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI--ETC 60 + +WNVN +RA I + + + D++ LQET+T ++ P + + + Sbjct: 1 MRFVSWNVNGLRAAIRKGIDGYFDDLKADVVMLQETRTLEEQLPKDWAWPTGWDVTLHPA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GVA S + G + ++ + Sbjct: 61 EKKGYSGVATASTQAHAVVAKGKGGVFDSNDSEGRVLVCEVDG---VVCVNTYLPSGSNK 117 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K W++ + +F L+ P++ GD NI D +NP ++ F R Sbjct: 118 DERQTFKEGWMEEWRQFIRPYLDDTRPVVVCGDLNIAHTEDDIWNPKGNARNSGFLPHER 177 Query: 181 QSFQKLQNMGFTDAIRAT-HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 F L G+ DA R D +YS+W + +K++G RID+ +L+P A + Sbjct: 178 AWFSDLLADGWLDAFRHKVGDGAKVYSWWSNRGQARAKDRGWRIDYFLLNPAAAEAMVDC 237 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 I + G SDH PV++ LDI Sbjct: 238 TIVRQ--GGIDVSDHAPVVLDLDI 259 >gi|255534152|ref|YP_003094524.1| exodeoxyribonuclease III Xth [Pedobacter heparinus DSM 2366] gi|255347136|gb|ACU06462.1| exodeoxyribonuclease III Xth [Pedobacter heparinus DSM 2366] Length = 256 Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 73/264 (27%), Positives = 123/264 (46%), Gaps = 14/264 (5%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPF--ETLQSLNYHIETC 60 + + ++NVN IR+ N W++ + D+IC+QE K P ++ L YH Sbjct: 1 MKIISYNVNGIRSASTKNFFGWLQATDADMICMQEVKALPSQIPEIIALIEQLGYHHYWF 60 Query: 61 G--QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 +K Y+GVAIL++ +P + + +D + R + A F + ++YLP G+ Sbjct: 61 PAEKKGYSGVAILTRIKPNHVEYGCGEEWIDKEGRILRADFD----DFSLMSVYLPSGS- 115 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + K +++ F + + + LI +GDYNI D +NP N + F E Sbjct: 116 SGDERQVKKYEFMRFFEAYITALRKTLPNLIISGDYNICHTAIDIHNPKSNANSSGFLPE 175 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R+ + N GF D R + H Y++W + A+S +KN G RID+ + + L Sbjct: 176 EREWMELFLNGGFIDTFRHFNKDPHHYTWWSFRANSRAKNLGWRIDYHLATQAMLPKLKK 235 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 I SDH PV++ L+ Sbjct: 236 VSILADA----IHSDHCPVLLELN 255 >gi|81428949|ref|YP_395949.1| exodeoxyribonuclease III [Lactobacillus sakei subsp. sakei 23K] gi|78610591|emb|CAI55642.1| Exodeoxyribonuclease III [Lactobacillus sakei subsp. sakei 23K] Length = 254 Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats. Identities = 69/259 (26%), Positives = 107/259 (41%), Gaps = 13/259 (5%) Query: 4 VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + ++ + D CLQETK + + L + + + Sbjct: 1 MKFISWNVNGLRAVLKKDFMTTFEQFDADFFCLQETKMQAGQVELD-LPGYHQYFNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K++P+ + + + D + R I + Q I N + Sbjct: 60 KGYSGAAIFTKHEPLNVTYGIQQPEHDHEGRVITLEYP---QFFLITCYTPNSQNQLKRL 116 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 Y R L ++P+IF GD N+ + D N A F+ E R Sbjct: 117 DYRMTWENAFRAYVQQ---LGTQKPVIFCGDLNVAHEAIDLKNDRTNHKSAGFSDEERVQ 173 Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 L GFTD R + +YS+W Y + N G RID+ + S E L A+I Sbjct: 174 MTTLLQSGFTDTFRYFYPDQTDIYSWWSYRFHARDNNAGWRIDYFITSDELQPKLMDAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVS 260 T+ G SDH PV + Sbjct: 234 HTEIYG----SDHCPVELD 248 >gi|148556689|ref|YP_001264271.1| exodeoxyribonuclease III Xth [Sphingomonas wittichii RW1] gi|148501879|gb|ABQ70133.1| exodeoxyribonuclease III Xth [Sphingomonas wittichii RW1] Length = 285 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 75/267 (28%), Positives = 120/267 (44%), Gaps = 8/267 (2%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIET 59 M+ + +A+WN+NS+RARI + +++E DI+CLQETK D FPF + L Y H E Sbjct: 23 MAKLKIASWNINSVRARIDIVRQFLEEQQIDILCLQETKVRDDTFPFGMFRDLGYDHFEI 82 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 GQ ++GVAI+SK + H D+ + + + I + + + G+ Sbjct: 83 NGQPMHHGVAIISKLPLHDHGRHDWQDNGEARHVGVRLDCGIRLENVYV----PAGGDIA 138 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + R EL EP + GD+NI P D ++ + T Sbjct: 139 DREVNPKFGQKLDFLGRMIRWSEELREPTLLVGDFNIAPLECDVWSHKQLLDVVSHTPIE 198 Query: 180 RQ--SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLL 236 + + + LY++W Y A W + ++G R+DH+ SPE L Sbjct: 199 VETLGRLQASHDWVDLGRSFVPPPARLYTWWSYRAQDWAASDRGRRLDHMWASPEVAKLA 258 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263 + + R W +PSDH P+I LD+ Sbjct: 259 TNHYVCEPCRSWIRPSDHIPLITELDV 285 >gi|146286032|sp|A1YES6|APEX1_GORGO RecName: Full=DNA-(apurinic or apyrimidinic site) lyase; AltName: Full=APEX nuclease; Short=APEN; AltName: Full=Apurinic-apyrimidinic endonuclease 1; Short=AP endonuclease 1; AltName: Full=REF-1; AltName: Full=Redox factor-1; Contains: RecName: Full=DNA-(apurinic or apyrimidinic site) lyase, mitochondrial gi|120974134|gb|ABM46644.1| APEX1 [Gorilla gorilla] Length = 318 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 74/269 (27%), Positives = 126/269 (46%), Gaps = 17/269 (6%) Query: 2 SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQ----SLNYH 56 + + + +WNV+ +RA I W+KE PDI+CLQETK + P E + S Y Sbjct: 60 ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSYQYW 119 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 ++ Y+GV +LS+ P+++ + ++ D + R I A F + + G Sbjct: 120 SAPXXKEGYSGVGLLSRQCPLKVSYGIGEEEHDQEGRVIVAEF---DSFVLVTAYVPNAG 176 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + +Y + R + L +PL+ GD N+ + D NP + +A FT Sbjct: 177 RGLVRLEYRQRWDEAFRRF---LKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 233 Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E + + LQ + D+ R + + Y+FW Y ++ SKN G R+D+ +LS Sbjct: 234 PQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLP 293 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 L ++I +K G SDH P+ + L + Sbjct: 294 ALCDSKIRSKALG----SDHCPITLYLAL 318 >gi|468371|gb|AAA21019.1| apurinic/apyrimidinic endonuclease [Rattus norvegicus] Length = 316 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 73/269 (27%), Positives = 125/269 (46%), Gaps = 17/269 (6%) Query: 2 SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN----YH 56 + + + +WNV+ +RA I W+KE PDI+CLQETK + P E + Y Sbjct: 58 ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLTHQYW 117 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 ++ Y+GV +LS+ P+++ + ++ D + R I A F + + G Sbjct: 118 SAPSDKEGYSGVGLLSRQCPLKVSYGIGEEEHDQEGRVIVAEFE---SFILVTAYVPNAG 174 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + +Y + R + L +PL+ GD N+ + D NP + +A FT Sbjct: 175 RGLVRLEYRQRWDEAFRKF---LKDLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 231 Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E + + LQ + D+ R + + Y+FW Y ++ SKN G R+D+ +LS Sbjct: 232 PQEAQGFGEMLQAVPLADSFRHLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSQSLLP 291 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 L ++I +K G SDH P+ + L + Sbjct: 292 ALCDSKIRSKALG----SDHCPITLYLAL 316 >gi|163869207|ref|YP_001610459.1| exodeoxyribonuclease III [Bartonella tribocorum CIP 105476] gi|161018906|emb|CAK02464.1| exodeoxyribonuclease III [Bartonella tribocorum CIP 105476] Length = 271 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 83/265 (31%), Positives = 123/265 (46%), Gaps = 9/265 (3%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQK 63 +ATWN+NSIR R+ + +++ D++CLQETK D FP E ++ Y HI GQK Sbjct: 4 RIATWNINSIRLRLAQVFRYLELFPADVLCLQETKCPDALFPVEAFEAAGYKHIALSGQK 63 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 SYNGVAI+S+ ++ + R+I I+ ++LRI N Y+P G I + Sbjct: 64 SYNGVAIVSRLPFKKVNKRFFCQ--NQDCRYISVIVEIHGRSLRIHNFYVPAGGDIPDAE 121 Query: 124 YDDKISWIKRF---LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EV 179 ++K F + F E + GD NI P D ++ T E Sbjct: 122 VNEKFRHKLDFLEEMSFIRADQEKGISSLLLGDLNIAPLAEDVWSHQQLLKVVSHTPIET 181 Query: 180 RQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLH 237 + G+ D +R LY++W Y A W+ + G R+DH+ SP+ S L Sbjct: 182 ERLQGLCCQGGWIDLMRLHIPVPTKLYTWWSYRARDWALTDYGRRLDHVWSSPDLASFLV 241 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLD 262 RGW +PSDH PV + Sbjct: 242 DLSTFRDARGWERPSDHIPVQTVFN 266 >gi|207742014|ref|YP_002258406.1| exodeoxyribonuclease III protein [Ralstonia solanacearum IPO1609] gi|206593400|emb|CAQ60327.1| exodeoxyribonuclease III protein [Ralstonia solanacearum IPO1609] Length = 261 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 61/264 (23%), Positives = 112/264 (42%), Gaps = 12/264 (4%) Query: 3 VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IET 59 ++ + + N+N +R A W+ + N D +C+QE K + E L YH + Sbjct: 1 MLRIISANLNGVRSAASKGFFDWMGKQNADFVCVQELKCAQDDMTPEFLAPHGYHGVFQH 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G + +++QP +++ G + D + R++EA + L I ++Y+P G+ Sbjct: 61 AVKKGYSGAGLYARHQPDDVIVGFDGGEFDAEGRYVEARYG----KLSIISVYVPSGSSG 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + R E ++ GD NI+ + D N + ++ E Sbjct: 117 EERQQAKYRFMDLFMQHLVDLRHEKGREVVLCGDVNIVHKEIDIKNWKGNQKNSGCLPEE 176 Query: 180 RQSFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R +L + G+ D R Y++W +++KN G RID+ + +P + Sbjct: 177 RAWLTRLFDEVGYVDVFRTLDTRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGIAATARR 236 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 I K SDH P+ V D Sbjct: 237 TSIFRDI----KFSDHAPLTVDYD 256 >gi|307700400|ref|ZP_07637439.1| putative exodeoxyribonuclease III [Mobiluncus mulieris FB024-16] gi|307614385|gb|EFN93615.1| putative exodeoxyribonuclease III [Mobiluncus mulieris FB024-16] Length = 288 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 64/288 (22%), Positives = 115/288 (39%), Gaps = 30/288 (10%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++TWN+NSIR+R+ + ++ +N D++ +QE K FP E + Y + G Sbjct: 1 MRISTWNINSIRSRLPRVLKFLCRSNVDVLAMQEIKCRVSQFPVEAFLASGYQVFVNGLN 60 Query: 64 SYNGVAILSKYQPIEIVTH------LPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 +NGVAI + V +P + + +LY+P+G Sbjct: 61 QWNGVAIAVRADLDAQVLGTEFSGKIPQPPFGKPPVVEPRALGVRVAGIECWSLYVPNGR 120 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEP--LIFAGDYNIIPQPHDCYNPIIWENDACF 175 I + + K++W++ A L +F GD+NI P D ++ + Sbjct: 121 EIDNPHFAYKLAWLEALRSHAHTLLAANPTALGLFMGDFNIAPCDEDVWDIQEFVGATHV 180 Query: 176 T----------------------LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD 213 + E S + + + T +++WDY Sbjct: 181 SVPEREAFARLLQSDTLAQAVSLDETAISRIRTDSTNCGGLVEVTRQFAPGWTYWDYQKA 240 Query: 214 SWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 W +N+G++ID + +P + A I + R KPSDH PV++ L Sbjct: 241 RWRRNQGMKIDFALATPNLADKITGAFIGREERDGEKPSDHVPVVLEL 288 >gi|187922338|ref|YP_001893980.1| exodeoxyribonuclease III Xth [Burkholderia phytofirmans PsJN] gi|187713532|gb|ACD14756.1| exodeoxyribonuclease III Xth [Burkholderia phytofirmans PsJN] Length = 259 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 63/264 (23%), Positives = 111/264 (42%), Gaps = 14/264 (5%) Query: 3 VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59 ++ V T N+N IR A W E D++C+QE K + E + N+ + + Sbjct: 1 MLRVITANLNGIRSAAKKGFFDWFGEQKADVLCVQEIKCSQDDMTPEFMAPHNFTGYFQH 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G + ++++P E+V ++ D + R++E F L + ++Y+P G+ Sbjct: 61 AVKKGYSGAGVYTRHEPDEVVIGFGSEEFDPEGRYVELRFG----KLSVISVYVPSGSSG 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + L E +I GD NI+ + D N + ++ E Sbjct: 117 DERQQA--KYRFMDEFMPHLAELSQEREVIVCGDVNIVHKEIDIKNWKSNQKNSGCLPEE 174 Query: 180 RQSFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R KL + G+ D R Y++W +++KN G RID+ + +P S Sbjct: 175 RAWLTKLFDEVGYVDVFRTLDQRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGIASKAKR 234 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 + K SDH P+ V D Sbjct: 235 TDVFRDI----KFSDHAPLTVDYD 254 >gi|32266427|ref|NP_860459.1| exodeoxyribonuclease LexA [Helicobacter hepaticus ATCC 51449] gi|32262477|gb|AAP77525.1| exodeoxyribonuclease LexA [Helicobacter hepaticus ATCC 51449] Length = 252 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 77/261 (29%), Positives = 112/261 (42%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + E N DI C+QE+K + F ++ + + + Sbjct: 1 MKLISWNVNGLRACMNKGFMDFFNEVNADIFCIQESKMCKEQAQF-HFENYKEYWNSAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+GV ILSK QPI + + D + R I A + + N+Y P+ Sbjct: 60 KGYSGVVILSKTQPINVAYDMGITYHDKEGRIITAEYP----HFYLVNVYTPNSKRELER 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 D + R + LE + +I GD N+ Q D NP +A FT E R Sbjct: 116 L--DYRMKWEDDFRAFVKNLENHKSVIICGDLNVAHQEIDLKNPKTNRRNAGFTDEERNK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 L + GF D R + T YS+W Y + N G RID+ + S T L A I Sbjct: 174 MSALLDAGFIDTFRYFYPTLTGAYSWWSYMGKARENNTGWRIDYFLCSQSLTPSLKDANI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 G SDH PV + L Sbjct: 234 YPHIFG----SDHCPVGLELK 250 >gi|126730406|ref|ZP_01746217.1| exodeoxyribonuclease III, putative [Sagittula stellata E-37] gi|126709139|gb|EBA08194.1| exodeoxyribonuclease III, putative [Sagittula stellata E-37] Length = 262 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 84/268 (31%), Positives = 119/268 (44%), Gaps = 11/268 (4%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIET 59 MS T+ATWN+NS+R R ++ ++E PD++CLQE K+ + P E L Y ++ Sbjct: 1 MS-FTLATWNINSVRLRKALVSKLMQEEAPDVLCLQECKSPVEKIPHEVFAELGYRYMVG 59 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 GQK YNGVAILS+ ++ GD + I N Y+P G Sbjct: 60 RGQKGYNGVAILSRLPLEDV-----GDKDFAALGHARHVAARLENGVTIHNFYVPAGGDE 114 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL 177 + + K +L E P GD NI P+ D ++ T Sbjct: 115 PDREKNIKFGQKLDYLTEMRDWFHTERPERAILVGDLNIAPREDDVWDHKKLLKIVSHTP 174 Query: 178 -EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSL 235 EV G+ D R L+S+W Y A W +KG R+DHI +P+ Sbjct: 175 IEVEHLGAAQDAGGWVDITRKDIPDGRLFSWWSYRAKDWDAADKGRRLDHIWATPDIADA 234 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 HS+RI RGW +PSDH PV + D+ Sbjct: 235 GHSSRILRAARGWEQPSDHAPVFATFDL 262 >gi|28493711|ref|NP_787872.1| exodeoxyribonuclease III [Tropheryma whipplei str. Twist] gi|28572897|ref|NP_789677.1| exodeoxyribonuclease III [Tropheryma whipplei TW08/27] gi|28411030|emb|CAD67415.1| exodeoxyribonuclease III [Tropheryma whipplei TW08/27] gi|28476753|gb|AAO44841.1| exodeoxyribonuclease III [Tropheryma whipplei str. Twist] Length = 269 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 84/270 (31%), Positives = 130/270 (48%), Gaps = 14/270 (5%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSI+ R+ + W+ EN DI+ LQE K FP E Y G Sbjct: 1 MRIATWNVNSIKTRLSQVLHWLTENEIDILALQEIKCRTNAFPAEVFMEHGYFCAAHGLG 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQAR--------FIEATFTINTQTLRIGNLYLPH 115 GVAI+SK +P +I T + G +R+ ++Y+P+ Sbjct: 61 GREGVAIVSKSEPQDITTDVEGIPGYDDRNTGKQDKSDVQARIIAATVGGVRLYSVYVPN 120 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN-DAC 174 G + S Y K+ W++ F + E L+ AGD+NI+ D +P + + D Sbjct: 121 GRDVHSPHYLYKLDWLEGFATHIRGVINTEPNLVIAGDFNIVLFDSDSNDPRVQTDTDVF 180 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 T RQ+F L ++G D +R T ++FWDY A + KN+G+RIDHI+ + + Sbjct: 181 RTPHERQAFYNLLDLGLRDLVRPTEP--EGFTFWDYRAGRFQKNEGLRIDHILGTDPIAN 238 Query: 235 LLHSARIDTKPRGWTK---PSDHTPVIVSL 261 + A+I + R + PSDH PV++ L Sbjct: 239 SVRFAKIHHEQRKGDEGKTPSDHVPVMIEL 268 >gi|307728165|ref|YP_003905389.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1003] gi|307582700|gb|ADN56098.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1003] Length = 259 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 63/264 (23%), Positives = 111/264 (42%), Gaps = 14/264 (5%) Query: 3 VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59 ++ V T N+N IR A W E N D++C+QE K + E + ++ + + Sbjct: 1 MLRVITANLNGIRSAAKKGFFDWFGEQNADVLCVQEIKCSQDDMTPEFMAPHDFTGYFQH 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G + ++++P E+V ++ D + R++E F L I ++Y+P G+ Sbjct: 61 AVKKGYSGAGVYTRHEPDEVVIGFGSEEFDPEGRYVELRFG----KLSIVSVYVPSGSSG 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + L E +I GD NI+ + D N + ++ E Sbjct: 117 EERQQA--KYRFMDEFMPHLAGLAREREVIVCGDVNIVHKEIDIKNWKSNQKNSGCLPEE 174 Query: 180 RQSFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R KL + G+ D R Y++W +++KN G RID+ + +P Sbjct: 175 RAWLTKLFDEVGYVDVFRTLDQRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGIAGKAKR 234 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 + K SDH P+ V D Sbjct: 235 TEVFRDI----KFSDHAPLTVDYD 254 >gi|84498021|ref|ZP_00996818.1| exodeoxyribonuclease III [Janibacter sp. HTCC2649] gi|84381521|gb|EAP97404.1| exodeoxyribonuclease III [Janibacter sp. HTCC2649] Length = 269 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 53/268 (19%), Positives = 99/268 (36%), Gaps = 10/268 (3%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN---YHIET 59 + + + NVN IRA W+ + D+I LQE + D + L +H+ + Sbjct: 1 MRLISANVNGIRAAARRGGLEWLAMQHADVIALQEVRASDDQL-RDVLAQGGLAQWHVSS 59 Query: 60 CG--QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 K + GVA+L++ P+ + + L + R++E + + + Y+ G Sbjct: 60 AQGRTKGHAGVAVLTRQPPLRVSSDLGPQEFADAGRWLEVDVRGPEGPVTVISTYVHTGE 119 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 +T D+K ++ + + + GD NI D N A F Sbjct: 120 ALTPK-QDEKFRFLDAVGSRLADLAVNDGYAVLTGDLNICHSADDLKNWKGNVGKAGFLP 178 Query: 178 EVRQSFQKLQNMGFTDAIRA--THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E + + + Y++W + ++ + G RID+ S L Sbjct: 179 EEQAHLDRWVGALAYADVHRALHGPGPGPYTWWSWRGKAFDNDAGWRIDYHFASAPLAKL 238 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 A + + SDH P+ V D+ Sbjct: 239 ATRADVGRASTYAERWSDHAPLTVDYDL 266 >gi|13162337|ref|NP_077062.1| DNA-(apurinic or apyrimidinic site) lyase [Rattus norvegicus] gi|1168468|sp|P43138|APEX1_RAT RecName: Full=DNA-(apurinic or apyrimidinic site) lyase; AltName: Full=APEX nuclease; Short=APEN; AltName: Full=Apurinic-apyrimidinic endonuclease 1; Short=AP endonuclease 1; AltName: Full=REF-1; AltName: Full=Redox factor-1; Contains: RecName: Full=DNA-(apurinic or apyrimidinic site) lyase, mitochondrial gi|11878235|gb|AAG40859.1|AF309114_1 nuclease APEX [Rattus norvegicus] gi|624915|dbj|BAA07938.1| APEX nuclease [Rattus norvegicus] gi|5360709|dbj|BAA82124.1| Apex nuclease [Rattus norvegicus] gi|50926078|gb|AAH78816.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Rattus norvegicus] gi|149033628|gb|EDL88426.1| apurinic/apyrimidinic endonuclease 1, isoform CRA_a [Rattus norvegicus] Length = 317 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 73/269 (27%), Positives = 125/269 (46%), Gaps = 17/269 (6%) Query: 2 SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN----YH 56 + + + +WNV+ +RA I W+KE PDI+CLQETK + P E + Y Sbjct: 59 ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLTHQYW 118 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 ++ Y+GV +LS+ P+++ + ++ D + R I A F + + G Sbjct: 119 SAPSDKEGYSGVGLLSRQCPLKVSYGIGEEEHDQEGRVIVAEFE---SFILVTAYVPNAG 175 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + +Y + R + L +PL+ GD N+ + D NP + +A FT Sbjct: 176 RGLVRLEYRQRWDEAFRKF---LKDLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 232 Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E + + LQ + D+ R + + Y+FW Y ++ SKN G R+D+ +LS Sbjct: 233 PQERQGFGEMLQAVPLADSFRHLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLP 292 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 L ++I +K G SDH P+ + L + Sbjct: 293 ALCDSKIRSKALG----SDHCPITLYLAL 317 >gi|154244152|ref|YP_001415110.1| exodeoxyribonuclease III Xth [Xanthobacter autotrophicus Py2] gi|154158237|gb|ABS65453.1| exodeoxyribonuclease III Xth [Xanthobacter autotrophicus Py2] Length = 290 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 66/270 (24%), Positives = 114/270 (42%), Gaps = 12/270 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62 +T+ TWN+NS+R R+ + A ++ PDI+CLQETK +D FP ++ + + HI GQ Sbjct: 20 LTICTWNINSVRIRLDIVRAAVETLRPDILCLQETKCQDDKFPLAAIRDMGFPHIALNGQ 79 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-TQTLRIGNLYLPHGNPITS 121 K ++GVA S+ + + D + + + L + N Y+P G I Sbjct: 80 KGWHGVATFSRRPFVSVEKGDFCGKGDARHVAVTLAPEHALGKPLTVHNFYVPAGGDIPD 139 Query: 122 TKYDDKISWI-------KRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 + + K + + A+ + + GD NI P D + N Sbjct: 140 PELNPKFAHKLAFLDEVTAWPPLAAAAADDGRHAVVVGDLNIAPLETDVWGHKQLLNVVS 199 Query: 175 FTLEVRQSFQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPE 231 T + + Q L+++W Y + + + ++G R+DH+ S Sbjct: 200 HTPVEVERLNRFQASGPWVDVMRTFVPPKDKLFTWWSYRSPDYTANDRGRRLDHVWASQS 259 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + + RGW KPSDH PV ++ Sbjct: 260 LAPSAQAMTVLKDARGWEKPSDHVPVSLTF 289 >gi|291403439|ref|XP_002718079.1| PREDICTED: APEX nuclease 1 [Oryctolagus cuniculus] Length = 318 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 75/269 (27%), Positives = 126/269 (46%), Gaps = 17/269 (6%) Query: 2 SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN----YH 56 + + + +WNV+ +RA I WIKE PDI+CLQETK + P E + Y Sbjct: 60 ATLKICSWNVDGLRAWIKKKGLDWIKEEAPDILCLQETKCSENKLPAELQELPGLPHQYW 119 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 ++ Y+GV +LS+ P+++ + ++ D + R I A F + + G Sbjct: 120 SAPSDKEGYSGVGLLSRQCPLKVSYGIGEEEHDQEGRVIVAEF---DAFVLVTAYVPNAG 176 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + +Y + R + L +PL+ GD N+ + D NP + +A FT Sbjct: 177 RGLVRLEYRQRWDEAFRKF---LKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 233 Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E + + LQ + TD+ R + + Y+FW Y ++ SKN G R+D+ +LS Sbjct: 234 PQERQGFGELLQAVPLTDSFRHLYPDTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLP 293 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 L ++I +K G SDH P+ + L + Sbjct: 294 ALCDSKIRSKALG----SDHCPITLYLAL 318 >gi|109082640|ref|XP_001090240.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase isoform 8 [Macaca mulatta] gi|90078218|dbj|BAE88789.1| unnamed protein product [Macaca fascicularis] Length = 318 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 73/269 (27%), Positives = 126/269 (46%), Gaps = 17/269 (6%) Query: 2 SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN----YH 56 + + + +WNV+ +RA I W+KE PDI+CLQETK + P E + Y Sbjct: 60 ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQYW 119 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 ++ Y+GV +LS++ P+++ + ++ D + R I A F + + G Sbjct: 120 SAPSDKEGYSGVGLLSRHCPLKVSYGIGEEEHDQEGRVIVAEF---DSFVLVTTYVPNAG 176 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + +Y + R + L +PL+ GD N+ + D NP + +A FT Sbjct: 177 RGLVRLEYRQRWDEAFRKF---LKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 233 Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E + + LQ + D+ R + + Y+FW Y ++ SKN G R+D+ +LS Sbjct: 234 PQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLP 293 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 L ++I +K G SDH P+ + L + Sbjct: 294 ALCDSKIRSKALG----SDHCPITLYLAL 318 >gi|315497172|ref|YP_004085976.1| exodeoxyribonuclease iii xth [Asticcacaulis excentricus CB 48] gi|315415184|gb|ADU11825.1| exodeoxyribonuclease III Xth [Asticcacaulis excentricus CB 48] Length = 266 Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats. Identities = 74/272 (27%), Positives = 124/272 (45%), Gaps = 18/272 (6%) Query: 4 VT--VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETC 60 + +A+WN+NS+R RI + ++ PDI+CLQE K ++ FP + + Y HI Sbjct: 1 MRLSIASWNINSVRLRIDQVIRFLDMARPDILCLQEIKCQNGEFPRKAFEDAGYPHILVT 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 GQK ++GVA++SK + L R I + + N Y+P G + Sbjct: 61 GQKGWHGVALVSKLPFE------INEILPFCRRGEARVQGIQVAGIDLWNFYIPAGGDVP 114 Query: 121 STKYDDKISWIKRFLRFASQRL---ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + +DK F + L + PL+ AGD NI P +D ++ T Sbjct: 115 DRQANDKFDHKLEFYERLTAHLKTRNPDAPLLIAGDLNIAPGENDVWSHRQMLKVVSHTP 174 Query: 178 EVRQSFQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATS 234 ++F L + L+++W Y A + K N+G+R+DH++++P + Sbjct: 175 PELEAFADLMAAGGFHDAFRELWPEPQKLFTWWSYRAADFRKSNRGLRLDHLLINPALKA 234 Query: 235 LLHS---ARIDTKPRGWTKPSDHTPVIVSLDI 263 + S A I R W +PSDH P+ + D+ Sbjct: 235 RITSPIAAVIHDSVREWDRPSDHAPIQIEFDL 266 >gi|178743|gb|AAA58371.1| apurinic endonuclease [Homo sapiens] Length = 318 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 72/269 (26%), Positives = 123/269 (45%), Gaps = 17/269 (6%) Query: 2 SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN----YH 56 + + + +WNV+ +RA I W+KE PDI+CLQETK + P E + Y Sbjct: 60 ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQYW 119 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 ++ Y+GV +LS+ P+++ + ++ D + R I A F + + G Sbjct: 120 SAPSDKEGYSGVGLLSRQCPLKVSYGIGDEEHDQEGRVIVAEF---DSFVLVTAYVPNAG 176 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + +Y + R + L +PL+ GD N+ + D NP + +A FT Sbjct: 177 RGLVRLEYRQRWDEAFRKF---LKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 233 Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E + + LQ + D+ R + + Y+FW Y ++ SKN G R+D+ +LS Sbjct: 234 PQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLP 293 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 L ++I R SDH P+ + L + Sbjct: 294 ALCDSKI----RSKALASDHCPITLYLAL 318 >gi|269468349|gb|EEZ80020.1| exonuclease III [uncultured SUP05 cluster bacterium] Length = 255 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 58/262 (22%), Positives = 105/262 (40%), Gaps = 12/262 (4%) Query: 5 TVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETL-QSLNYHIETCGQ 62 + T NVN IRA W+K N D++C+QE K ++ + + ++ + + + Sbjct: 3 RIITANVNGIRAAERKGFFDWMKTQNADVVCVQEIKAQEDQLDDKFYPKGIHTYYKPAER 62 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G + K +P ++ D ++ ++ I + Sbjct: 63 KGYSGTGLYCKDKPDRVIFSPWEDIDFEGRFIQADFRNLSVISIYIPSGSSKQERQDYKM 122 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + I+RF+ + + E I GD NI+ + D N +N + E R Sbjct: 123 NF-----MIERFMPYLKKLQEDGRQYIVCGDINIVHKEIDIKNFASNKNHSGCLPEERAW 177 Query: 183 FQK-LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 ++ F DA R + H Y++W +W+ N G RID+ +LS I Sbjct: 178 MEQLFTEAKFIDAFREVNQEKHQYTWWSNRGQAWANNTGWRIDYQILSANLKDTPQRVEI 237 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 R SDH+P+I+ ++ Sbjct: 238 YKNER----FSDHSPLIIDYNL 255 >gi|328947089|ref|YP_004364426.1| exodeoxyribonuclease III Xth [Treponema succinifaciens DSM 2489] gi|328447413|gb|AEB13129.1| exodeoxyribonuclease III Xth [Treponema succinifaciens DSM 2489] Length = 251 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 68/261 (26%), Positives = 114/261 (43%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + N + D CLQETK + E L + + Sbjct: 1 MKFISWNVNGLRAVMGKNFMEAFGSLDADFFCLQETKLQAGQIQME-LPDYHQFWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G A+ +K++PI + + D + R I + + + + N Sbjct: 60 KGYSGTAVFTKHEPISASYGIGIAEHDTEGRVITLEYE------KFFLVTVYTPNSQDEL 113 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + + R + L L++ +I GD N+ + D NP +A FT E R Sbjct: 114 RRLEYRMKWEDDFRAYLKTLALKKGVIVCGDMNVAHEEIDIKNPKTNRRNAGFTDEERGK 173 Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +L + GFTD+ R + +YS+W Y + KN G RID+ ++S + A+I Sbjct: 174 MTELLSSGFTDSFRHFYPDTAGVYSWWSYRFHAREKNTGWRIDYFLVSDSIKDKMTGAKI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 T+ G SDH PV + ++ Sbjct: 234 HTEILG----SDHCPVELDME 250 >gi|260881707|ref|ZP_05405068.2| exodeoxyribonuclease III [Mitsuokella multacida DSM 20544] gi|260848221|gb|EEX68228.1| exodeoxyribonuclease III [Mitsuokella multacida DSM 20544] Length = 253 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 65/262 (24%), Positives = 113/262 (43%), Gaps = 13/262 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + + + D+ LQETK + + + L + + + Sbjct: 3 MKCISWNVNGLRACLKKGFMESFVKLDADVFALQETKMQPEQAILD-LPGYRQYWNSAER 61 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G A+ S+ +P+ + L ++ D + R I F + + G + Sbjct: 62 KGYSGTAVFSRIEPLAVTYGLGIEEHDHEGRVITLEFPDC-YFVTVYTPNSKRGLERLAY 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + + R L+ ++P+I GD N+ D NP ++A FT E R Sbjct: 121 RME-----WEDAFRAYLVALDAKKPVIVCGDLNVAHTEIDLKNPKTNHHNAGFTDEERGK 175 Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L + GF D RA + +Y++W Y + N G RID+ + S + A I Sbjct: 176 FTELLDAGFIDTFRALYPDRTGIYTWWSYLRKARDTNAGWRIDYFVTSARLREKIADATI 235 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 + G SDH PV + L + Sbjct: 236 HNEVFG----SDHCPVGLELRL 253 >gi|325265848|ref|ZP_08132534.1| exodeoxyribonuclease III [Kingella denitrificans ATCC 33394] gi|324982486|gb|EGC18112.1| exodeoxyribonuclease III [Kingella denitrificans ATCC 33394] Length = 257 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 60/262 (22%), Positives = 111/262 (42%), Gaps = 13/262 (4%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETC 60 + + + NVN IR+ ++ ++ DI+C+QE K ++ + + H Sbjct: 1 MRIISANVNGIRSAYKKGFLDYMAQSGADIVCVQELKAQEADLADDMKNPHGMHGVWHCA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 ++ Y+GVAI SK P + L + D + RF+ A F + Sbjct: 61 QKRGYSGVAIYSKRTPDAVHIGLGLEQFDQEGRFVRADFGNLSVI-----SLYLPSGTSA 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K ++ F ++ ++ GD+NI Q D N + ++ F E R Sbjct: 116 EERQAYKYKFLDAFYPILAELKASGRDVVVCGDWNIAHQNIDIKNWKGNQKNSGFLPEER 175 Query: 181 QSFQKLQ-NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 K+ +G+ DA R + Y++W +++K+ G RID+ M++P+ + SA Sbjct: 176 AWIGKVIGELGWVDAWRTLYPEVAGYTWWSNRGQAYAKDVGWRIDYQMVTPQLAQAMQSA 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261 + K SDH P++V Sbjct: 236 HVYKDV----KFSDHAPLVVDY 253 >gi|149203971|ref|ZP_01880939.1| exodeoxyribonuclease III [Roseovarius sp. TM1035] gi|149142413|gb|EDM30458.1| exodeoxyribonuclease III [Roseovarius sp. TM1035] Length = 262 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 89/268 (33%), Positives = 120/268 (44%), Gaps = 11/268 (4%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIET 59 MS T+ATWN+NS+R R +A ++E PDI+CLQE K+ P E +L Y H+ Sbjct: 1 MS-FTLATWNINSVRLREGLVARLMQEEGPDILCLQECKSPVDKMPLEGFAALGYAHVVA 59 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 GQK YNGVAILSK E+ G + I N Y+P G + Sbjct: 60 RGQKGYNGVAILSKLPIEEV-----GAMDFADLGHARHIAGRLENGVVIHNFYVPAGGDV 114 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL 177 +DK +L P GD NI P+ D +N T Sbjct: 115 PDRAVNDKFGQKLDYLTGMRDWFHDSRPEKAILVGDLNIAPREDDVWNHKQLLKIVSHTP 174 Query: 178 -EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSL 235 EV + G+ D RA LYS+W Y A W +KG R+DH+ + + + Sbjct: 175 VEVDHLSAVMAAGGWQDVTRADIPEGQLYSWWSYRAADWDAADKGRRLDHVWATGDIATS 234 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 HS+RI RGW +PSDH PV + D+ Sbjct: 235 AHSSRILRGARGWEQPSDHAPVFATFDL 262 >gi|297182400|gb|ADI18565.1| exonuclease IIi [uncultured gamma proteobacterium HF4000_23L14] Length = 254 Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats. Identities = 57/263 (21%), Positives = 106/263 (40%), Gaps = 12/263 (4%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ-SLNYHIETCG 61 + + T NVN IRA W+++ N D++CLQE K ++ ++ + + Sbjct: 1 MRIITINVNGIRAAERKGFFIWLEKQNADVVCLQEIKAQEHQLDERFYPSGMHTYYHSAE 60 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G A+ K +P +++ D ++ ++ + + Sbjct: 61 RKGYSGTALYCKSKPDQVIYSPWQDINSEGRLIQADFGNLSVASIYLPSGSSKEERQAFK 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 ++ R L I+ GD+NI + D N + ++ F E R Sbjct: 121 MEF-----ISDRLLPHLHALQNDGRQYIYCGDWNIAHKKIDLKNWQSNQKNSGFLPEERA 175 Query: 182 SFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 KL G+ DA R + Y++W +W N G R+D+ ++S L + Sbjct: 176 WLDKLYEEVGYIDAFREINQDEFQYTWWSNRGQAWLHNTGWRLDYQVVSSNLAGLATACE 235 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263 I K R SDH+P+I+ ++ Sbjct: 236 IYKKER----FSDHSPLIMDYNL 254 >gi|296161384|ref|ZP_06844191.1| exodeoxyribonuclease III Xth [Burkholderia sp. Ch1-1] gi|295888370|gb|EFG68181.1| exodeoxyribonuclease III Xth [Burkholderia sp. Ch1-1] Length = 259 Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats. Identities = 63/264 (23%), Positives = 112/264 (42%), Gaps = 14/264 (5%) Query: 3 VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59 ++ V T N+N IR A W E D++C+QE K + E + N+ + + Sbjct: 1 MLRVITANLNGIRSAAKKGFFDWFGEQKADVLCVQEIKCSQDDMTPEFMAPHNFTGYFQH 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G + ++++P E+V ++ D + R++E F L + ++Y+P G+ Sbjct: 61 AVKKGYSGAGVYTRHEPDEVVIGFGSEEFDPEGRYVELRFG----KLSVISVYVPSGSSG 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + L E +I GD NI+ + D N + ++ E Sbjct: 117 DERQQA--KYRFMDEFMPHLAELAQEREVIVCGDVNIVHKEIDIKNWKSNQKNSGCLPEE 174 Query: 180 RQSFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R KL + G+ D R Y++W +++KN G RID+ + +P+ S Sbjct: 175 RAWLTKLFDEVGYVDVFRTLDQRPEQYTWWSNRGQAYAKNVGWRIDYQIATPDIASKAKR 234 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 + K SDH P+ V D Sbjct: 235 TDVFRDI----KFSDHAPLTVDYD 254 >gi|158421717|ref|YP_001523009.1| exodeoxyribonuclease III protein [Azorhizobium caulinodans ORS 571] gi|158328606|dbj|BAF86091.1| exodeoxyribonuclease III protein [Azorhizobium caulinodans ORS 571] Length = 290 Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats. Identities = 68/272 (25%), Positives = 110/272 (40%), Gaps = 12/272 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62 +TV TWN+NS+R R+ + ++ PD++CLQETK +D FP ++ L + HI GQ Sbjct: 19 LTVCTWNINSVRIRLDIVKETVERLKPDVLCLQETKCQDDKFPLAAIRELGFPHIALNGQ 78 Query: 63 KSYNGVAILSKYQPIEIVTH-LPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 K ++GVA SK I G + + I N Y+P G + Sbjct: 79 KGWHGVATFSKRPFDAIEKQEFCGKGDARHIAVTLGGAGGLSAPVTIHNFYIPAGGDEPN 138 Query: 122 TKYDDKISWI-------KRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 + + K + + + I GD NI P D +N + Sbjct: 139 PEVNPKFAHKLAFLDEAIAWEKLTEAGRPAGAHAILVGDLNIAPLETDVWNHKQLLSVVS 198 Query: 175 FTLEVRQSFQKLQNM--GFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPE 231 T + Q T L+++W Y + + ++G R+DH+ S Sbjct: 199 HTPVEVDLLTRFQAAGPWIDVMREFVPPTEKLFTWWSYRSPDHTVNDRGRRLDHVWTSRS 258 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + + + R W KPSDH PV V+ ++ Sbjct: 259 LAGKAKAMTVLKEARSWEKPSDHVPVAVTFEV 290 >gi|330999011|ref|ZP_08322736.1| exodeoxyribonuclease III [Parasutterella excrementihominis YIT 11859] gi|329575753|gb|EGG57279.1| exodeoxyribonuclease III [Parasutterella excrementihominis YIT 11859] Length = 295 Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats. Identities = 62/263 (23%), Positives = 105/263 (39%), Gaps = 12/263 (4%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFET-LQSLNY-HIET 59 V+ + T N N IR+ + W+ + + DI+C+QE K + P E L Y ++ Sbjct: 38 VLKIITINTNGIRSAVNKGFHLWLAKQDADIVCIQELKAQPDEVPDEINLDGTFYRYVHC 97 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G AIL++ +P E++ ++ D + R++EA F I Sbjct: 98 AEKKGYSGCAILTRKKPDEVIIGFGNEEFDREGRYVEARFNN-----LIVVSIYFPSGSS 152 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + + K ++ + L ++ GD+NI + D N ++ F E Sbjct: 153 SEERQQAKFRFLDVIKGRLDELLRDGRDVVLCGDFNIAHKEIDIKNWKGNLKNSGFLPEE 212 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 RQ G+ D R +++W + N G RID+ +P S Sbjct: 213 RQWITDRLREGWQDVFRRLDPRPDRFTWWSNRGRARINNVGWRIDYQFSTPAIASTAKET 272 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 I R SDH P+ V D Sbjct: 273 DIYRDER----FSDHAPLTVVYD 291 >gi|154707400|ref|YP_001425116.1| exodeoxyribonuclease III [Coxiella burnetii Dugway 5J108-111] gi|154356686|gb|ABS78148.1| exodeoxyribonuclease III [Coxiella burnetii Dugway 5J108-111] Length = 259 Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats. Identities = 63/263 (23%), Positives = 109/263 (41%), Gaps = 13/263 (4%) Query: 4 VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + T N+N IRA W+K DI+CLQETK + + YH Sbjct: 1 MRIITLNLNGIRAAARRWFFDWLKRQKADIVCLQETKACLEITNGDQFHPKGYHCYYHDA 60 Query: 63 KS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + Y+GV I + +P + T L + D + R+I+A F + Sbjct: 61 EKSGYSGVGIYCREKPDRVTTRLGWEHADKEGRYIQADFGSLSV-----ASLYMPSGTTG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K ++ R+++ + + I GD+NI+ + D N + + E R Sbjct: 116 EHRQKIKFDFMDRYMKRLKNIVHSKRSFIICGDWNIVHKEIDIKNFKSNQKHSGCLPEER 175 Query: 181 QS-FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + +G DA R + Y++W +W KN G RID+ +++ + + + S Sbjct: 176 AWLDEVFTKVGLVDAFRVVNQKPDQYTWWSSRGRAWEKNVGWRIDYQVITSDLKNSVKSE 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 RI R SDH P+I+ + Sbjct: 236 RIYKDKR----FSDHAPLIIDYE 254 >gi|86153870|ref|ZP_01072073.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni HB93-13] gi|85842831|gb|EAQ60043.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni HB93-13] Length = 252 Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats. Identities = 61/262 (23%), Positives = 96/262 (36%), Gaps = 12/262 (4%) Query: 4 VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA N WI + D I QE K + FP + + + Sbjct: 1 MKLLSWNVNGLRAICDKNALDWIAQEKIDFIGFQEIKAHEDKFPKKIYEYPFKQMYFNSA 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K ++S V D + I + N Sbjct: 61 KRAGYSGVMSLCNFDSEVKKCEFFDDEEGRVLEHRFKNIALFNIYFPN------GQKDEE 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + K+ + FL + + L+ +I GD N + D +P N + F R Sbjct: 115 RLNFKMKFYADFLVYLDKLLKDGFEIIICGDVNTAHKEIDLTHPKANANTSGFLPIERAW 174 Query: 183 FQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 L +GF D R + + YS+W Y + +N G RID+ +S L +A I Sbjct: 175 IDDLLKLGFIDTFREINGEIKEKYSWWSYRMKARERNVGWRIDYFFISKGLKDKLKNAFI 234 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 G SDH PV + +DI Sbjct: 235 RDDIFG----SDHAPVGIEIDI 252 >gi|294788545|ref|ZP_06753787.1| exodeoxyribonuclease III [Simonsiella muelleri ATCC 29453] gi|294483422|gb|EFG31107.1| exodeoxyribonuclease III [Simonsiella muelleri ATCC 29453] Length = 259 Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats. Identities = 66/263 (25%), Positives = 119/263 (45%), Gaps = 13/263 (4%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETC 60 + + + NVN IR+ A+I ++ DI+C+QE K ++ + + + H Sbjct: 1 MRIISANVNGIRSAYKKGFLAYIAQSGADIVCVQELKAQESDLSDDMQRPHGMHGVWHCA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 ++ Y+GVAI SK +P + L + D + RF+ A F L + +LYLP G Sbjct: 61 QKRGYSGVAIYSKQKPDHVQIGLGIEKFDNEGRFVRADFG----HLSVISLYLPSGTSAE 116 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 K ++ F ++ ++ GD+NI Q D N ++ F E R Sbjct: 117 ER-QAYKYEFLDAFYPLLAELKASGRDVVVCGDWNIAHQNIDIKNWKGNLKNSGFLPEER 175 Query: 181 QSF-QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + + +G+ D R + Y++W +++ + G RID+ M++P + H+A Sbjct: 176 EWIGHVITKLGWVDIWRTLYPDVAGYTWWSNRGQAYANDVGWRIDYQMVTPNLATKAHTA 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 + + K SDH P++V D Sbjct: 236 HVYKEV----KFSDHAPLVVDYD 254 >gi|118138505|pdb|2ISI|A Chain A, Crystal Structure Of Ape1 From Homo Sapiens In A New Crystal Form Complexed With A Ligand gi|118138506|pdb|2ISI|B Chain B, Crystal Structure Of Ape1 From Homo Sapiens In A New Crystal Form Complexed With A Ligand gi|118138507|pdb|2ISI|C Chain C, Crystal Structure Of Ape1 From Homo Sapiens In A New Crystal Form Complexed With A Ligand Length = 317 Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats. Identities = 73/269 (27%), Positives = 125/269 (46%), Gaps = 17/269 (6%) Query: 2 SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN----YH 56 + + + +WNV+ +RA I W+KE PDI+CLQETK + P E + Y Sbjct: 59 ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQYW 118 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 ++ Y+GV +LS+ P+++ + ++ D + R I A F + + G Sbjct: 119 SAPSDKEGYSGVGLLSRQCPLKVSYGIGDEEHDQEGRVIVAEF---DSFVLVTAYVPNAG 175 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + +Y + R + L +PL+ GD N+ + D NP + +A FT Sbjct: 176 RGLVRLEYRQRWDEAFRKF---LKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 232 Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E + + LQ + D+ R + + Y+FW Y ++ SKN G R+D+ +LS Sbjct: 233 PQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLP 292 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 L ++I +K G SDH P+ + L + Sbjct: 293 ALCDSKIRSKALG----SDHCPITLYLAL 317 >gi|60652565|gb|AAX28977.1| APEX nuclease 1 [synthetic construct] Length = 319 Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats. Identities = 73/269 (27%), Positives = 125/269 (46%), Gaps = 17/269 (6%) Query: 2 SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN----YH 56 + + + +WNV+ +RA I W+KE PDI+CLQETK + P E + Y Sbjct: 60 ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQYW 119 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 ++ Y+GV +LS+ P+++ + ++ D + R I A F + + G Sbjct: 120 SAPSDKEGYSGVGLLSRQCPLKVSYGIGDEEHDQEGRVIVAEF---DSFVLVTAYVPNAG 176 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + +Y + R + L +PL+ GD N+ + D NP + +A FT Sbjct: 177 RGLVRLEYRQRWDEAFRKF---LKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 233 Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E + + LQ + D+ R + + Y+FW Y ++ SKN G R+D+ +LS Sbjct: 234 PQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLP 293 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 L ++I +K G SDH P+ + L + Sbjct: 294 ALCDSKIRSKALG----SDHCPITLYLAL 318 >gi|299037|gb|AAB26054.1| APEX nuclease=major apurinic/apyrimidinic endonuclease [human, Peptide, 317 aa] Length = 317 Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats. Identities = 73/269 (27%), Positives = 125/269 (46%), Gaps = 17/269 (6%) Query: 2 SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN----YH 56 + + + +WNV+ +RA I W+KE PDI+CLQETK + P E + Y Sbjct: 59 ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQYW 118 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 ++ Y+GV +LS+ P+++ + ++ D + R I A F + + G Sbjct: 119 SAPSDKEGYSGVGLLSRQCPLKVSYGIGDEEHDQEGRVIVAEF---DSFVLVTAYVPNAG 175 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + +Y + R + L +PL+ GD N+ + D NP + +A FT Sbjct: 176 RGLVRLEYRQRWDEAFRKF---LKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 232 Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E + + LQ + D+ R + + Y+FW Y ++ SKN G R+D+ +LS Sbjct: 233 PQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLP 292 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 L ++I +K G SDH P+ + L + Sbjct: 293 ALCDSKIRSKALG----SDHCPITLYLAL 317 >gi|157830335|pdb|1BIX|A Chain A, The Crystal Structure Of The Human Dna Repair Endonuclease Hap1 Suggests The Recognition Of Extra-Helical Deoxyribose At Dna Abasic Sites Length = 287 Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats. Identities = 73/269 (27%), Positives = 125/269 (46%), Gaps = 17/269 (6%) Query: 2 SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN----YH 56 + + + +WNV+ +RA I W+KE PDI+CLQETK + P E + Y Sbjct: 29 ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQYW 88 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 ++ Y+GV +LS+ P+++ + ++ D + R I A F + + G Sbjct: 89 SAPSDKEGYSGVGLLSRQCPLKVSYGIGDEEHDQEGRVIVAEF---DSFVLVTAYVPNAG 145 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + +Y + R + L +PL+ GD N+ + D NP + +A FT Sbjct: 146 RGLVRLEYRQRWDEAFRKF---LKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 202 Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E + + LQ + D+ R + + Y+FW Y ++ SKN G R+D+ +LS Sbjct: 203 PQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLP 262 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 L ++I +K G SDH P+ + L + Sbjct: 263 ALCDSKIRSKALG----SDHCPITLYLAL 287 >gi|219478|dbj|BAA14381.1| apurinic/apyrimidinic endonuclease [Homo sapiens] Length = 318 Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats. Identities = 73/269 (27%), Positives = 125/269 (46%), Gaps = 17/269 (6%) Query: 2 SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN----YH 56 + + + +WNV+ +RA I W+KE PDI+CLQETK + P E + Y Sbjct: 60 ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQYW 119 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 ++ Y+GV +LS+ P+++ + ++ D + R I A F + + G Sbjct: 120 SAPSDKEGYSGVGLLSRQCPLKVSYGIGDEEHDQEGRVIVAEF---DSFVLVTAYVPNAG 176 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + +Y + R + L +PL+ GD N+ + D NP + +A FT Sbjct: 177 RGLVRLEYRQRWDEAFRKF---LKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 233 Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E + + LQ + D+ R + + Y+FW Y ++ SKN G R+D+ +LS Sbjct: 234 PQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLP 293 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 L ++I +K G SDH P+ + L + Sbjct: 294 ALCDSKIRSKALG----SDHCPITLYLAL 318 >gi|18375501|ref|NP_001632.2| DNA-(apurinic or apyrimidinic site) lyase [Homo sapiens] gi|18375503|ref|NP_542379.1| DNA-(apurinic or apyrimidinic site) lyase [Homo sapiens] gi|18375505|ref|NP_542380.1| DNA-(apurinic or apyrimidinic site) lyase [Homo sapiens] gi|113984|sp|P27695|APEX1_HUMAN RecName: Full=DNA-(apurinic or apyrimidinic site) lyase; AltName: Full=APEX nuclease; Short=APEN; AltName: Full=Apurinic-apyrimidinic endonuclease 1; Short=AP endonuclease 1; Short=APE-1; AltName: Full=REF-1; AltName: Full=Redox factor-1; Contains: RecName: Full=DNA-(apurinic or apyrimidinic site) lyase, mitochondrial gi|13399540|pdb|1E9N|A Chain A, A Second Divalent Metal Ion In The Active Site Of A New Crystal Form Of Human ApurinicAPYRIMIDINIC ENDONUCLEASE, Ape1, And Its Implications For The Catalytic Mechanism gi|13399541|pdb|1E9N|B Chain B, A Second Divalent Metal Ion In The Active Site Of A New Crystal Form Of Human ApurinicAPYRIMIDINIC ENDONUCLEASE, Ape1, And Its Implications For The Catalytic Mechanism gi|13399606|pdb|1HD7|A Chain A, A Second Divalent Metal Ion In The Active Site Of A New Crystal Form Of Human ApurinicAPYRIDINIMIC ENDONUCLEASE, Ape1, And Its Implications For The Catalytic Mechanism gi|19339022|gb|AAL86909.1|AF488551_1 APEX nuclease (multifunctional DNA repair enzyme) [Homo sapiens] gi|32022|emb|CAA46925.1| AP endonuclease 1 [Homo sapiens] gi|178747|gb|AAA58372.1| apurinic/apyrimidinic endonuclease [Homo sapiens] gi|183780|gb|AAA58629.1| apurinic/apyrimidinic endonuclease [Homo sapiens] gi|254069|gb|AAB22977.1| Ref-1 [Homo sapiens] gi|13436404|gb|AAH04979.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Homo sapiens] gi|28071072|emb|CAD61917.1| unnamed protein product [Homo sapiens] gi|54697126|gb|AAV38935.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Homo sapiens] gi|60655677|gb|AAX32402.1| APEX nuclease 1 [synthetic construct] gi|61358645|gb|AAX41600.1| APEX nuclease 1 [synthetic construct] gi|63100763|gb|AAH95428.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Homo sapiens] gi|119586867|gb|EAW66463.1| APEX nuclease (multifunctional DNA repair enzyme) 1, isoform CRA_a [Homo sapiens] gi|119586868|gb|EAW66464.1| APEX nuclease (multifunctional DNA repair enzyme) 1, isoform CRA_a [Homo sapiens] gi|119586869|gb|EAW66465.1| APEX nuclease (multifunctional DNA repair enzyme) 1, isoform CRA_a [Homo sapiens] gi|119586870|gb|EAW66466.1| APEX nuclease (multifunctional DNA repair enzyme) 1, isoform CRA_a [Homo sapiens] gi|119586871|gb|EAW66467.1| APEX nuclease (multifunctional DNA repair enzyme) 1, isoform CRA_a [Homo sapiens] gi|119586872|gb|EAW66468.1| APEX nuclease (multifunctional DNA repair enzyme) 1, isoform CRA_a [Homo sapiens] gi|158255636|dbj|BAF83789.1| unnamed protein product [Homo sapiens] Length = 318 Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats. Identities = 73/269 (27%), Positives = 125/269 (46%), Gaps = 17/269 (6%) Query: 2 SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN----YH 56 + + + +WNV+ +RA I W+KE PDI+CLQETK + P E + Y Sbjct: 60 ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQYW 119 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 ++ Y+GV +LS+ P+++ + ++ D + R I A F + + G Sbjct: 120 SAPSDKEGYSGVGLLSRQCPLKVSYGIGDEEHDQEGRVIVAEF---DSFVLVTAYVPNAG 176 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + +Y + R + L +PL+ GD N+ + D NP + +A FT Sbjct: 177 RGLVRLEYRQRWDEAFRKF---LKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 233 Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E + + LQ + D+ R + + Y+FW Y ++ SKN G R+D+ +LS Sbjct: 234 PQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLP 293 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 L ++I +K G SDH P+ + L + Sbjct: 294 ALCDSKIRSKALG----SDHCPITLYLAL 318 >gi|91781453|ref|YP_556659.1| exodeoxyribonucleaseiii xth [Burkholderia xenovorans LB400] gi|91685407|gb|ABE28607.1| ExodeoxyribonucleaseIII xth [Burkholderia xenovorans LB400] Length = 259 Score = 173 bits (438), Expect = 3e-41, Method: Composition-based stats. Identities = 62/264 (23%), Positives = 111/264 (42%), Gaps = 14/264 (5%) Query: 3 VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59 ++ V T N+N IR A W E D++C+QE K + E + ++ + + Sbjct: 1 MLRVITANLNGIRSAAKKGFFDWFGEQKADVLCVQEIKCSQDDMTPEFMAPHDFTGYFQH 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G + ++++P E+V ++ D + R++E F L + ++Y+P G+ Sbjct: 61 AVKKGYSGAGVYTRHEPDEVVIGFGSEEFDPEGRYVELRFG----KLSVISVYVPSGSSG 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + L E +I GD NI+ + D N + ++ E Sbjct: 117 DERQQA--KYRFMDEFMPHLAELAQEREVIVCGDVNIVHKEIDIKNWKSNQKNSGCLPEE 174 Query: 180 RQSFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R KL + G+ D R Y++W +++KN G RID+ + +P S Sbjct: 175 RAWLTKLFDEVGYVDVFRTLDQRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGIASKAKR 234 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 + K SDH P+ V D Sbjct: 235 TDVFRDI----KFSDHAPLTVDYD 254 >gi|259649286|dbj|BAI41448.1| exodeoxyribonuclease III [Lactobacillus rhamnosus GG] Length = 253 Score = 173 bits (437), Expect = 3e-41, Method: Composition-based stats. Identities = 67/258 (25%), Positives = 109/258 (42%), Gaps = 12/258 (4%) Query: 3 VVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ + +WNVN +RA + E + D CLQETK + + L + Sbjct: 1 MLKMISWNVNGLRAVLKKDFMTIFNELDADWFCLQETKMQAGQVELD-LPGYYQYFNYAE 59 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G AI +K++P+ + + + D + R I +T + Sbjct: 60 RKGYSGTAIFTKHKPLNVTYGMGIPEHDTEGRIITLEYTKFYLMTVYTPNSGGELKRLDY 119 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + R + L ++PL++ GD N+ +P D N ++A FT E R Sbjct: 120 RQQ------WDRDFLAYTNELAAKKPLVYCGDLNVAHEPIDLKNDKTNHHNAGFTDEERA 173 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F K N GF D R + YS+W Y + + N G RID+ + S + A+I Sbjct: 174 DFTKQLNSGFIDTFRHFYPDTVTYSWWSYRFHARANNAGWRIDYFVASSAFQPYIQDAKI 233 Query: 242 DTKPRGWTKPSDHTPVIV 259 T+ G SDH PV + Sbjct: 234 LTQIMG----SDHCPVEL 247 >gi|209522354|ref|ZP_03270972.1| exodeoxyribonuclease III Xth [Burkholderia sp. H160] gi|209497213|gb|EDZ97450.1| exodeoxyribonuclease III Xth [Burkholderia sp. H160] Length = 260 Score = 173 bits (437), Expect = 3e-41, Method: Composition-based stats. Identities = 62/264 (23%), Positives = 111/264 (42%), Gaps = 14/264 (5%) Query: 3 VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59 ++ V T N+N IR A W E D++C+QE K + E + ++ + + Sbjct: 1 MLRVITANLNGIRSAAKKGFFDWFGEQGADVLCVQEIKCSQDDMTPEFMAPHDFTGYFQH 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G + ++++P E+V ++ D + R++E F L + ++Y+P G+ Sbjct: 61 AVKKGYSGAGVYTRHEPDEVVIGFGSEEFDPEGRYVELRFG----KLSVISVYVPSGSSG 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + L E +I GD NI+ + D N + ++ E Sbjct: 117 DDRQQA--KFRFMDEFMPHLAELATEREVIVCGDVNIVHKEIDIKNWKGNQKNSGCLPEE 174 Query: 180 RQSFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R KL + G+ D R Y++W +++KN G RID+ + +P S Sbjct: 175 RAWLDKLFDEVGYVDVFRTLDPRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGIASKAKR 234 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 + K SDH P+ V D Sbjct: 235 TDVFRDI----KFSDHAPLTVDYD 254 >gi|241762159|ref|ZP_04760242.1| exodeoxyribonuclease III Xth [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|260753749|ref|YP_003226642.1| exodeoxyribonuclease III Xth [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|283856531|ref|YP_163434.2| exodeoxyribonuclease III Xth [Zymomonas mobilis subsp. mobilis ZM4] gi|241373409|gb|EER63009.1| exodeoxyribonuclease III Xth [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|258553112|gb|ACV76058.1| exodeoxyribonuclease III Xth [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|283775536|gb|AAV90323.2| exodeoxyribonuclease III Xth [Zymomonas mobilis subsp. mobilis ZM4] Length = 264 Score = 173 bits (437), Expect = 3e-41, Method: Composition-based stats. Identities = 82/263 (31%), Positives = 123/263 (46%), Gaps = 8/263 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62 + + +WN+NS+RAR+ ++ ++KE PDI+CLQETK + FP L Y H GQ Sbjct: 1 MRIVSWNINSVRARLAHVERFLKEEQPDILCLQETKATNGVFPSRFFYDLGYIHQAVHGQ 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 YNGVAILS+ + +AR I T +R+ N+Y+P G I Sbjct: 61 PGYNGVAILSRIAFSPAEITSHDWQNNQEARHIGITLE---NGVRLENVYIPAGGDIPDR 117 Query: 123 KYDDKISWIKRFL-RFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180 + K F+ R LE+P I GD+NI P D ++ T EV Sbjct: 118 DLNPKFGQKLDFISRMIEWSSHLEQPTILVGDFNIAPLESDVWSHKQLLKVVSHTPIEVD 177 Query: 181 QSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLLHS 238 + + + D R + LY++W Y + W+K ++G R+DH+ SP L Sbjct: 178 HLSRLQASHNWIDLGRHFYPAPERLYTWWSYRSKDWTKSDRGRRLDHMWASPSLVDHLVG 237 Query: 239 ARIDTKPRGWTKPSDHTPVIVSL 261 ++ R W KPSDH P++ Sbjct: 238 HKVYESCRSWIKPSDHVPLLTEF 260 >gi|32024|emb|CAA42437.1| HAP1 [Homo sapiens] Length = 318 Score = 173 bits (437), Expect = 3e-41, Method: Composition-based stats. Identities = 73/269 (27%), Positives = 125/269 (46%), Gaps = 17/269 (6%) Query: 2 SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN----YH 56 + + + +WNV+ +RA I W+KE PDI+CLQETK + P E + Y Sbjct: 60 ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQYW 119 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 ++ Y+GV +LS+ P+++ + ++ D + R I A F + + G Sbjct: 120 SAPSDKEGYSGVGLLSRQCPLKVSYGIGDEEHDQEGRVIVAEF---DSFVLVTAYVPNAG 176 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + +Y + R + L +PL+ GD N+ + D NP + +A FT Sbjct: 177 RGLVRLEYRQRWDEAFRKF---LKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 233 Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E + + LQ + D+ R + + Y+FW Y ++ SKN G R+D+ +LS Sbjct: 234 PQEAQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLP 293 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 L ++I +K G SDH P+ + L + Sbjct: 294 ALCDSKIRSKALG----SDHCPITLYLAL 318 >gi|110834346|ref|YP_693205.1| exodeoxyribonuclease III [Alcanivorax borkumensis SK2] gi|110647457|emb|CAL16933.1| exodeoxyribonuclease III [Alcanivorax borkumensis SK2] Length = 271 Score = 173 bits (437), Expect = 3e-41, Method: Composition-based stats. Identities = 75/270 (27%), Positives = 126/270 (46%), Gaps = 11/270 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 +T+ ++N+N IRAR+H L A I + P +I LQETK D +FP + ++ + YH GQK Sbjct: 1 MTLISFNINGIRARLHQLQAVIDKYQPALIGLQETKVHDPDFPEQAVRDMGYHPYYFGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-TQTLRIGNLYLPHGNPITST 122 + GVA++++ + P DD D Q R I T N + + N Y P G Sbjct: 61 GHYGVALITREPLESVQYGFPTDDEDAQRRMIIGTLKHNDGSLITVLNGYFPQGENRDHP 120 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175 K+ K + + + + + + GD+NI + E F Sbjct: 121 LKFPAKKKFYEDLQHYLITHHQPSDQVAVMGDFNISSTDLDIGIGEPNRKRWLREGKTSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKN--KGIRIDHIMLSPEA 232 E R+ + +L G TD R + T ++S++DY + + + +G+RID ++ + Sbjct: 181 LPEEREWWDRLVGWGLTDTFRHQNPTTDDVFSWFDYRSKGFDREPRRGLRIDTVLATEPL 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + L + +D + R KPSDH PV + Sbjct: 241 MAKLDTTGVDYQMRAMEKPSDHCPVWARFN 270 >gi|313904223|ref|ZP_07837602.1| exodeoxyribonuclease III Xth [Eubacterium cellulosolvens 6] gi|313471025|gb|EFR66348.1| exodeoxyribonuclease III Xth [Eubacterium cellulosolvens 6] Length = 250 Score = 173 bits (437), Expect = 3e-41, Method: Composition-based stats. Identities = 67/261 (25%), Positives = 115/261 (44%), Gaps = 12/261 (4%) Query: 4 VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + +E + D C+QE+K ++ + + N + + Sbjct: 1 MKFISWNVNGLRACMKKDFDKTFRELDADFFCIQESKLQEGQIEY-CPEGWNEYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +++ + ++ D + R I + + Sbjct: 60 KGYSGTAIWAKKPALQVTYGIGEEEHDHEGRVITLEYDTF-----FLVTVYTPNSQDGLK 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + D +++W R +L+ ++P+I GD N+ + D NP +A FT E R Sbjct: 115 RLDYRMTWE-DSFRAYLGKLDEKKPVIVCGDLNVAHEEIDLKNPKTNRKNAGFTDEERGK 173 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F +L + GFTD+ R H YS+W Y + KN G RID+ + S + A I Sbjct: 174 FTELLDAGFTDSFRYLHPEDVEYSWWSYRFHAREKNAGWRIDYFLTSERVKEKIEQAVIH 233 Query: 243 TKPRGWTKPSDHTPVIVSLDI 263 + G SDH PV + + I Sbjct: 234 QEIFG----SDHCPVELDISI 250 >gi|85375221|ref|YP_459283.1| exonuclease III [Erythrobacter litoralis HTCC2594] gi|84788304|gb|ABC64486.1| exonuclease III [Erythrobacter litoralis HTCC2594] Length = 265 Score = 173 bits (437), Expect = 3e-41, Method: Composition-based stats. Identities = 75/263 (28%), Positives = 116/263 (44%), Gaps = 4/263 (1%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCG 61 +V+V TWN+NS+R R+ + +I + PD++CLQE K ++ FP+E + L Y H G Sbjct: 1 MVSVTTWNINSVRLRMPIVERFIDQEAPDVLCLQEIKCQEHQFPYEAFRKLGYEHFAVHG 60 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 QK Y+GVA + K E H D+ + + IE T T+ G+ Sbjct: 61 QKGYHGVATVGKVPFTEFSRHDWQDNGEARHVGIELTEGPAKGTVIENVYVPAGGDIPDR 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + + R +++ P + GD+NI P D +N T + Sbjct: 121 EQNLKFGQKLDFLERMTRWADKVDRPTLIVGDFNIAPLESDVWNHKQLLKVVSHTPVEVE 180 Query: 182 SFQKLQNMGFTDAIRATH--DTHHLYSFWDYYADSWSKN-KGIRIDHIMLSPEATSLLHS 238 + Q+ + I H YS+W Y + W KN +G R+DH+ SPE + Sbjct: 181 TLQRFMDAHGWSDIGREHIRAPERYYSWWSYRSPDWRKNDRGRRLDHMWASPELAAQATG 240 Query: 239 ARIDTKPRGWTKPSDHTPVIVSL 261 R+ R W KPSDH P+ Sbjct: 241 HRLLEDARSWEKPSDHIPLTTEF 263 >gi|227509865|ref|ZP_03939914.1| exodeoxyribonuclease III [Lactobacillus brevis subsp. gravesensis ATCC 27305] gi|227190789|gb|EEI70856.1| exodeoxyribonuclease III [Lactobacillus brevis subsp. gravesensis ATCC 27305] Length = 252 Score = 173 bits (437), Expect = 3e-41, Method: Composition-based stats. Identities = 67/258 (25%), Positives = 112/258 (43%), Gaps = 13/258 (5%) Query: 4 VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + A ++ + D C+QETK ++ + L + + Sbjct: 1 MKFISWNVNGLRAVVKKDFAETFQKLDADFFCIQETKMQEGQLKLD-LPGYRQYFNYAER 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +P+ + + + D + R I + + + G + Sbjct: 60 KGYSGTAIFAKDEPLTVSYGIQAPEFDHEGRAITLEYP---NFYLVTSYVPNSGAKLKRL 116 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + +L+ +P+I GD N+ D NP ++A FT E RQS Sbjct: 117 DFR---MGWDKAFHAYLNQLDSHKPVILCGDLNVAHHEIDLKNPKSNHHNAGFTDEERQS 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F KL + GF D R + +YS+W Y S +N G RID+ + S + ++I Sbjct: 174 FTKLLDQGFMDTFRHFYPDKEDIYSWWSYRFHSRDRNAGWRIDYFVTSKRLADHISDSKI 233 Query: 242 DTKPRGWTKPSDHTPVIV 259 T G SDH PV + Sbjct: 234 LTDIFG----SDHCPVEL 247 >gi|197106969|ref|YP_002132346.1| exodeoxyribonuclease III [Phenylobacterium zucineum HLK1] gi|196480389|gb|ACG79917.1| exodeoxyribonuclease III [Phenylobacterium zucineum HLK1] Length = 268 Score = 173 bits (437), Expect = 3e-41, Method: Composition-based stats. Identities = 73/270 (27%), Positives = 117/270 (43%), Gaps = 18/270 (6%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62 + + TWNVNS+R R+ +A +++E PD++CLQE K + FP + H+ GQ Sbjct: 3 LRICTWNVNSVRLRVEQVARFVREQAPDVLCLQEIKCREGEFPVNAFAEMGLPHVRIAGQ 62 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K ++GVAI S+ + LDV + + N Y+P G Sbjct: 63 KGWHGVAIASRLPIEDAPR------LDVCREGHARCVGGTVAGVEVHNFYIPAGGDTPDR 116 Query: 123 KYDDKISWIKRFLRFASQRL---ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + + K F + L + PL GD N+ P HD +N T Sbjct: 117 EPNPKFDHKLDFYEKLTAELAKRNPKAPLAVVGDLNVAPGEHDVWNHRYMSKVVSHTPAE 176 Query: 180 RQSFQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLL 236 ++F KL T + ++S+W Y A + + N+G+R+DHI+++P Sbjct: 177 VEAFGKLVASLGFIDLPRAQTPEPEKVFSWWSYRAADFRASNRGLRLDHILVTPGLKEAA 236 Query: 237 -----HSARIDTKPRGWTKPSDHTPVIVSL 261 ++R+ R W +PSDH PV L Sbjct: 237 FRLGSAASRVHDDVRAWERPSDHAPVTADL 266 >gi|297561147|ref|YP_003680121.1| exodeoxyribonuclease III Xth [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296845595|gb|ADH67615.1| exodeoxyribonuclease III Xth [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 267 Score = 173 bits (437), Expect = 3e-41, Method: Composition-based stats. Identities = 57/267 (21%), Positives = 105/267 (39%), Gaps = 8/267 (2%) Query: 4 VTVATWNVNSIRARIH---NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE-- 58 +TV++ NVN +RA W+ + D++CLQET+ E + P + +H+ Sbjct: 1 MTVSSVNVNGLRAAAKKDPGFVGWLAGTDADVVCLQETRAEAEQLPAGVVAPEGWHVVLA 60 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + GVA+ S+ +P E+ + + R++E T + G Sbjct: 61 PAAARGRAGVAVYSRREPDEVRVGFGHAEFEDAGRYVEVDLGGVTVA-SLYLPSGEVGTE 119 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 K +++ ++ ++ E L+ GD+NI D N +A F E Sbjct: 120 RQEEKERFMEAFLPYLVKRRAEVEERGRELVVCGDWNIAHAEVDLKNWRANRKNAGFLPE 179 Query: 179 VRQSFQKLQNM--GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 R+ ++ + D Y++W Y ++ + G RID + +P Sbjct: 180 EREWLSRVLDEAGFVDVVRSLHPDQEGPYTWWSYRGRAFDNDAGWRIDLQVATPGLAGCA 239 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263 AR++ + SDH PV V + Sbjct: 240 VDARVERASEHAGRWSDHAPVTVRYRV 266 >gi|254450397|ref|ZP_05063834.1| exodeoxyribonuclease III [Octadecabacter antarcticus 238] gi|198264803|gb|EDY89073.1| exodeoxyribonuclease III [Octadecabacter antarcticus 238] Length = 262 Score = 173 bits (437), Expect = 3e-41, Method: Composition-based stats. Identities = 82/268 (30%), Positives = 120/268 (44%), Gaps = 11/268 (4%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIET 59 MS T+ATWN+NS+R R +A + + PD++CLQE K+ P E Q+L Y H+ Sbjct: 1 MS-FTLATWNINSVRLREGLVARLMTQEAPDVLCLQECKSPVDKIPLEQFQALGYHHMVA 59 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 GQK YNGVAI SK E+ + + + N Y+P G Sbjct: 60 RGQKGYNGVAIFSKMPIEEVAAEDFVSLGHARHIAGRLDNG-----VTVHNFYVPAGGDK 114 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL 177 + + ++K +L P GD NI P+ D ++ T Sbjct: 115 PNREVNEKFGQKLDYLTEMRDYFGANAPEKSILVGDLNIAPREDDVWDHKKLLKVVSHTP 174 Query: 178 -EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSL 235 EV + D RA +LYS+W Y A W +KG R+DH+ +P+ + Sbjct: 175 VEVEHLADVQGAGDWVDVTRADIPHGNLYSWWSYRAPDWESADKGRRLDHVWATPDIANS 234 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 HS+R+ RGW +PSDH PV + D+ Sbjct: 235 AHSSRVIRAVRGWEQPSDHAPVFATFDL 262 >gi|49476204|ref|YP_034245.1| exodeoxyribonuclease III [Bartonella henselae str. Houston-1] gi|49239012|emb|CAF28312.1| Exodeoxyribonuclease III [Bartonella henselae str. Houston-1] Length = 269 Score = 173 bits (437), Expect = 4e-41, Method: Composition-based stats. Identities = 82/265 (30%), Positives = 123/265 (46%), Gaps = 9/265 (3%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQK 63 +ATWN+NSIR R+ + +++ + DI+CLQETK D FP + ++ Y +I GQK Sbjct: 4 RLATWNINSIRLRLAQIFQYLELFSADILCLQETKCPDALFPVKAFEAAGYKYIALSGQK 63 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 SYNGVAI+S+ + + R+I T + +++RI N Y+P G + Sbjct: 64 SYNGVAIVSRLPFKSVEKRFFCQ--KQECRYISVTVEVYGKSMRIHNFYVPAGGDVPDAD 121 Query: 124 YDDKISWIKRF---LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EV 179 ++K F + GD NI P P D ++ T E Sbjct: 122 VNEKFRHKLDFLEEMSSIQADQGDGVSSFLVGDLNIAPLPEDVWSHKQLLKVVSHTPIET 181 Query: 180 RQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLH 237 + G+ D +R LY++W Y A W+ ++G R+DHI SP+ TS + Sbjct: 182 ERLQALCCQGGWVDLMRMQFPVPTKLYTWWSYRARDWALADRGRRLDHIWSSPDLTSFVA 241 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLD 262 I RGW +PSDH PV D Sbjct: 242 ELSIFRHTRGWNQPSDHVPVQTVFD 266 >gi|126733854|ref|ZP_01749601.1| exodeoxyribonuclease III, putative [Roseobacter sp. CCS2] gi|126716720|gb|EBA13584.1| exodeoxyribonuclease III, putative [Roseobacter sp. CCS2] Length = 262 Score = 173 bits (437), Expect = 4e-41, Method: Composition-based stats. Identities = 82/264 (31%), Positives = 120/264 (45%), Gaps = 10/264 (3%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQK 63 T+ATWN+NS+R R +A +++ PD++CLQE K+ P QSL Y H+ GQK Sbjct: 4 TLATWNINSVRLREDIVAKLMRDEAPDVLCLQECKSPVDKIPLAQFQSLGYTHMAARGQK 63 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 YNGVAI SK +E G + + I N Y+P G + + Sbjct: 64 GYNGVAIFSKIPMVE-----AGAEDYAGLGHARHIAGKLENGVTIHNHYVPAGGDVADRE 118 Query: 124 YDDKISWIKRF--LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180 ++K + + + I GD NI P+ D ++ T EV Sbjct: 119 VNEKFGQKLDYLTDMRDAYHAQKPTKSILVGDLNIAPREDDVWDHKKLLKVVSHTPVEVA 178 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLLHSA 239 + ++D R LYS+W Y A W +KG R+DHI +P+ + HS+ Sbjct: 179 HFADVMDAGAWSDVTRNDITDGKLYSWWSYRAKDWDAADKGRRLDHIWATPDIKNAAHSS 238 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 R+ RGW KPSDH PV + D+ Sbjct: 239 RVLRDARGWEKPSDHAPVFATFDL 262 >gi|167648964|ref|YP_001686627.1| exodeoxyribonuclease III Xth [Caulobacter sp. K31] gi|167351394|gb|ABZ74129.1| exodeoxyribonuclease III Xth [Caulobacter sp. K31] Length = 268 Score = 173 bits (437), Expect = 4e-41, Method: Composition-based stats. Identities = 75/270 (27%), Positives = 118/270 (43%), Gaps = 18/270 (6%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62 + +ATWNVNS+R R A ++ E PD++CLQE K ++ FP E ++ H++ GQ Sbjct: 3 LRIATWNVNSVRLRAEQAARFVDEQAPDVLCLQEIKCQEGEFPREAFVAMGLPHLKIMGQ 62 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K ++GVAI S+ L+ + + I N Y+P G Sbjct: 63 KGWHGVAIASRLPIE------DAPALNACREGHARCVSGKIAGVEIHNFYIPAGGDTPDR 116 Query: 123 KYDDKISWIKRFLRF---ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K F ++ + + PLI GD N+ P +D ++ T Sbjct: 117 ALNPKFDHKLDFYETLTAEMKKRDPKAPLILTGDLNVAPGENDVWSHRQMSKIVSHTPVE 176 Query: 180 RQSFQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLL 236 ++F L AT + L+S+W Y A + K N+G+R+DHI+ SP Sbjct: 177 LEAFAGLVGSIDFLDLPRLATPEPEKLFSWWSYRAADFRKSNRGLRLDHILASPGLRDAA 236 Query: 237 -----HSARIDTKPRGWTKPSDHTPVIVSL 261 S+++ R W +PSDH PV L Sbjct: 237 IIDGKVSSKVHDTVREWERPSDHAPVTADL 266 >gi|121602111|ref|YP_988433.1| exodeoxyribonuclease III [Bartonella bacilliformis KC583] gi|120614288|gb|ABM44889.1| exodeoxyribonuclease III [Bartonella bacilliformis KC583] Length = 271 Score = 173 bits (437), Expect = 4e-41, Method: Composition-based stats. Identities = 82/265 (30%), Positives = 120/265 (45%), Gaps = 9/265 (3%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQK 63 +ATWN+NSIR R + +++ PDI+CLQETK D FP E S Y HI GQK Sbjct: 4 RIATWNINSIRFRFEQVLRYLELCAPDILCLQETKCLDNLFPREVFLSAGYKHIALNGQK 63 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +Y+GVAILS+ + + + R++ Q +RI N Y+P G + Sbjct: 64 AYHGVAILSRLPFVSVEKRFFCQ--KEECRYLSVVVKPYQQAIRIHNFYVPAGGDEPDVQ 121 Query: 124 YDDKISWIKRF---LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EV 179 ++K F + + GD NI P D ++ N T E Sbjct: 122 VNEKFRHKLDFLEEMSSIRADQGDGLSSLLMGDLNIAPLEDDVWSHKQLLNVVSHTPIET 181 Query: 180 RQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLH 237 + G+ D +R LY++W Y A W+ ++G R+DHI SP+ + Sbjct: 182 ERLKALCHEGGWVDLMRMKFPVPIKLYTWWSYRARDWALADRGRRLDHIWSSPDLAPFVE 241 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLD 262 I + RGW+KPSDH PV + Sbjct: 242 DLSIFREARGWSKPSDHVPVQSVFN 266 >gi|258507959|ref|YP_003170710.1| exodeoxyribonuclease III [Lactobacillus rhamnosus GG] gi|257147886|emb|CAR86859.1| Exodeoxyribonuclease III [Lactobacillus rhamnosus GG] Length = 252 Score = 173 bits (437), Expect = 4e-41, Method: Composition-based stats. Identities = 67/257 (26%), Positives = 108/257 (42%), Gaps = 12/257 (4%) Query: 4 VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + E + D CLQETK + + L + + Sbjct: 1 MKMISWNVNGLRAVLKKDFMTIFNELDADWFCLQETKMQAGQVELD-LPGYYQYFNYAER 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K++P+ + + + D + R I +T + Sbjct: 60 KGYSGTAIFTKHKPLNVTYGMGIPEHDTEGRIITLEYTKFYLMTVYTPNSGGELKRLDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + R + L ++PL++ GD N+ +P D N ++A FT E R Sbjct: 120 QQ------WDRDFLAYTNELAAKKPLVYCGDLNVAHEPIDLKNDKTNHHNAGFTDEERAD 173 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F K N GF D R + YS+W Y + + N G RID+ + S + A+I Sbjct: 174 FTKQLNSGFIDTFRHFYPDTVTYSWWSYRFHARANNAGWRIDYFVASSAFQPYIQDAKIL 233 Query: 243 TKPRGWTKPSDHTPVIV 259 T+ G SDH PV + Sbjct: 234 TQIMG----SDHCPVEL 246 >gi|224543695|ref|ZP_03684234.1| hypothetical protein CATMIT_02905 [Catenibacterium mitsuokai DSM 15897] gi|224523348|gb|EEF92453.1| hypothetical protein CATMIT_02905 [Catenibacterium mitsuokai DSM 15897] Length = 248 Score = 173 bits (437), Expect = 4e-41, Method: Composition-based stats. Identities = 61/261 (23%), Positives = 111/261 (42%), Gaps = 15/261 (5%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN IRA + K + DI LQETK + + + + + Sbjct: 1 MKYVSWNVNGIRACLKKGFLESFKSLDADIFALQETKAQKDQIDLD-IPGYTLYTNDAIK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AIL++ +P+ + + ++ D + R I F ++P P + Sbjct: 60 KGYSGTAILTRMKPLSVSYGIGIEEYDQEGRVITLEFE--------DYYFVPCYTPNSKK 111 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + ++ F + L +P+I GD N+ D NP ++A F+ + R Sbjct: 112 ELARIDYRMEWEDAFLAYLDALNKPVILCGDLNVAHHEIDLKNPSSNHHNAGFSDQERSK 171 Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +L + G+ D R + Y++W Y S +N G RID+ ++S + + I Sbjct: 172 MTELLSHGYIDTFRYLYPDKKDAYTWWSYMFKSRERNAGWRIDYFIVSESLKERIKESLI 231 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 + G SDH P+ + ++ Sbjct: 232 YSDILG----SDHCPIGLEME 248 >gi|30585287|gb|AAP36916.1| Homo sapiens APEX nuclease (multifunctional DNA repair enzyme) 1 [synthetic construct] gi|60653967|gb|AAX29676.1| APEX nuclease 1 [synthetic construct] Length = 319 Score = 173 bits (437), Expect = 4e-41, Method: Composition-based stats. Identities = 73/269 (27%), Positives = 125/269 (46%), Gaps = 17/269 (6%) Query: 2 SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN----YH 56 + + + +WNV+ +RA I W+KE PDI+CLQETK + P E + Y Sbjct: 60 ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQYW 119 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 ++ Y+GV +LS+ P+++ + ++ D + R I A F + + G Sbjct: 120 SAPSDKEGYSGVGLLSRQCPLKVSYGIGEEEHDQEGRVIVAEF---DSFVLVTAYVPNAG 176 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + +Y + R + L +PL+ GD N+ + D NP + +A FT Sbjct: 177 RGLVRLEYRQRWDEAFRKF---LKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 233 Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E + + LQ + D+ R + + Y+FW Y ++ SKN G R+D+ +LS Sbjct: 234 PQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLP 293 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 L ++I +K G SDH P+ + L + Sbjct: 294 ALCDSKIRSKALG----SDHCPITLYLAL 318 >gi|125490347|ref|NP_001074954.1| DNA-(apurinic or apyrimidinic site) lyase [Pan troglodytes] gi|146286033|sp|A1YFZ3|APEX1_PANPA RecName: Full=DNA-(apurinic or apyrimidinic site) lyase; AltName: Full=APEX nuclease; Short=APEN; AltName: Full=Apurinic-apyrimidinic endonuclease 1; Short=AP endonuclease 1; AltName: Full=REF-1; AltName: Full=Redox factor-1; Contains: RecName: Full=DNA-(apurinic or apyrimidinic site) lyase, mitochondrial gi|146286034|sp|A2T6Y4|APEX1_PANTR RecName: Full=DNA-(apurinic or apyrimidinic site) lyase; AltName: Full=APEX nuclease; Short=APEN; AltName: Full=Apurinic-apyrimidinic endonuclease 1; Short=AP endonuclease 1; AltName: Full=REF-1; AltName: Full=Redox factor-1; Contains: RecName: Full=DNA-(apurinic or apyrimidinic site) lyase, mitochondrial gi|219474|dbj|BAA02633.1| APEX nuclease [Homo sapiens] gi|1710232|gb|AAB50212.1| apurinic/apyrimidinic endonuclease [Homo sapiens] gi|12803075|gb|AAH02338.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Homo sapiens] gi|14198174|gb|AAH08145.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Homo sapiens] gi|17939646|gb|AAH19291.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Homo sapiens] gi|30583311|gb|AAP35900.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Homo sapiens] gi|61358640|gb|AAX41599.1| APEX nuclease 1 [synthetic construct] gi|61362429|gb|AAX42220.1| APEX nuclease 1 [synthetic construct] gi|61362434|gb|AAX42221.1| APEX nuclease 1 [synthetic construct] gi|121483845|gb|ABM54218.1| APEX1 [Pan paniscus] gi|123981822|gb|ABM82740.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [synthetic construct] gi|123996645|gb|ABM85924.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [synthetic construct] gi|124111123|gb|ABM91939.1| APEX1 [Pan troglodytes] gi|208965824|dbj|BAG72926.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [synthetic construct] gi|1090503|prf||2019234A APEX nuclease Length = 318 Score = 173 bits (437), Expect = 4e-41, Method: Composition-based stats. Identities = 73/269 (27%), Positives = 125/269 (46%), Gaps = 17/269 (6%) Query: 2 SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN----YH 56 + + + +WNV+ +RA I W+KE PDI+CLQETK + P E + Y Sbjct: 60 ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQYW 119 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 ++ Y+GV +LS+ P+++ + ++ D + R I A F + + G Sbjct: 120 SAPSDKEGYSGVGLLSRQCPLKVSYGIGEEEHDQEGRVIVAEF---DSFVLVTAYVPNAG 176 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + +Y + R + L +PL+ GD N+ + D NP + +A FT Sbjct: 177 RGLVRLEYRQRWDEAFRKF---LKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 233 Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E + + LQ + D+ R + + Y+FW Y ++ SKN G R+D+ +LS Sbjct: 234 PQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLP 293 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 L ++I +K G SDH P+ + L + Sbjct: 294 ALCDSKIRSKALG----SDHCPITLYLAL 318 >gi|229551812|ref|ZP_04440537.1| exodeoxyribonuclease III [Lactobacillus rhamnosus LMS2-1] gi|229314756|gb|EEN80729.1| exodeoxyribonuclease III [Lactobacillus rhamnosus LMS2-1] Length = 253 Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats. Identities = 66/258 (25%), Positives = 108/258 (41%), Gaps = 12/258 (4%) Query: 3 VVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ + +WNVN +RA + E + D CLQETK + + L + Sbjct: 1 MLKMISWNVNGLRAVLKKDFMTIFNELDADWFCLQETKMQAGQVELD-LPGYYQYFNYAE 59 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G AI +K++P+ + + + D + R I + + Sbjct: 60 RKGYSGTAIFTKHKPLNVTYGMGIPEHDTEGRIITLEYPKFYLMTVYTPNSGGELKRLDY 119 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + R + L ++PL++ GD N+ +P D N ++A FT E R Sbjct: 120 RQQ------WDRDFLAYTNELAAKKPLVYCGDLNVAHEPIDLKNDKTNHHNAGFTDEERA 173 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F K N GF D R + YS+W Y + + N G RID+ + S + A+I Sbjct: 174 DFTKQLNSGFIDTFRHFYPDTVTYSWWSYRFHARANNAGWRIDYFVASSAFQPYIQDAKI 233 Query: 242 DTKPRGWTKPSDHTPVIV 259 T+ G SDH PV + Sbjct: 234 LTQIMG----SDHCPVEL 247 >gi|297618884|ref|YP_003706989.1| exodeoxyribonuclease III Xth [Methanococcus voltae A3] gi|297377861|gb|ADI36016.1| exodeoxyribonuclease III Xth [Methanococcus voltae A3] Length = 249 Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats. Identities = 72/261 (27%), Positives = 111/261 (42%), Gaps = 15/261 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKT-EDKNFPFETLQSLNYHIETCG 61 + + +WNVN I+A + ++K+ NPDI+CLQE KT L + T Sbjct: 1 MKLISWNVNGIKAILQKGFVDFVKQENPDILCLQEIKTNSPSQI--LDLSEYKQYWNTAS 58 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G AI +K +P I + + + + Sbjct: 59 KKGYSGTAIFTKQKPKNITYGMDNFPDEEGRVITAEYDNYYLVNVY------TPNSQRGL 112 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 T+ D ++ W +FL + L +PLIF GD N+ + D NP + A FT E R Sbjct: 113 TRLDYRMKWDTKFLEYLLS-LNESKPLIFCGDLNVAHKEIDLKNPKTNKKHAGFTEEERM 171 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F K F D R + Y++W Y ++ +KN G RID+ S + + + I Sbjct: 172 GFDKYVENNFVDTFRLFNKESDNYTWWSYMHNARAKNIGWRIDYFCTSNSIVNYVKKSVI 231 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 K G SDH P+ + LD Sbjct: 232 LDKIYG----SDHCPIKLELD 248 >gi|303256316|ref|ZP_07342332.1| exodeoxyribonuclease III [Burkholderiales bacterium 1_1_47] gi|302861045|gb|EFL84120.1| exodeoxyribonuclease III [Burkholderiales bacterium 1_1_47] Length = 262 Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats. Identities = 62/263 (23%), Positives = 105/263 (39%), Gaps = 12/263 (4%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFET-LQSLNY-HIET 59 V+ + T N N IR+ + W+ + + DI+C+QE K + P E L Y ++ Sbjct: 5 VLKIITINTNGIRSAVNKGFHLWLAKQDADIVCIQELKAQPDEVPDEINLDGAFYRYVHC 64 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G AIL++ +P E++ ++ D + R++EA F I Sbjct: 65 AEKKGYSGCAILTRKKPDEVIIGFGNEEFDREGRYVEARFNN-----LIVVSIYFPSGSS 119 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + + K ++ + L ++ GD+NI + D N ++ F E Sbjct: 120 SEERQQAKFRFLDVIKGRLDELLRDGRDVVLCGDFNIAHKEIDIKNWKGNLKNSGFLPEE 179 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 RQ G+ D R +++W + N G RID+ +P S Sbjct: 180 RQWITDRLREGWQDVFRRLDPRPDRFTWWSNRGRARINNVGWRIDYQFSTPAIASTAKET 239 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 I R SDH P+ V D Sbjct: 240 DIYRDER----FSDHAPLTVVYD 258 >gi|303234331|ref|ZP_07320970.1| exodeoxyribonuclease III [Finegoldia magna BVS033A4] gi|302494447|gb|EFL54214.1| exodeoxyribonuclease III [Finegoldia magna BVS033A4] Length = 253 Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats. Identities = 64/262 (24%), Positives = 105/262 (40%), Gaps = 13/262 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFET-LQSLNYHIETCG 61 + + +WNVN RA + N DI CLQE K ++ E ++ + + + Sbjct: 1 MKLISWNVNGYRAVMKKGFMDAFNSLNADIFCLQEIKMKENQMTDEMNIEGYHRYSYSAN 60 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 + Y+G + +K +PI + + D+ D + R I + + + Sbjct: 61 KAGYSGTLVYTKVEPIGVSFGIGIDEHDTEGRVITCEYE---DFFLVNVYTPNSKQKLER 117 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 Y + L +P+I GD N+ D NP A FT E R Sbjct: 118 LDYR---MVWEDEFHNYLNILRDRKPVIVCGDLNVAHNEIDLKNPQSNRRSAGFTDEERN 174 Query: 182 SFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 L N G+ D R + YS+W Y+A + +N G RID+ ++S + L A+ Sbjct: 175 KMSLLLNDGYIDTFRYFYPDKTDEYSYWSYFAKARERNAGWRIDYFIVSDDLKDNLVDAK 234 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I G SDH PV + ++ Sbjct: 235 IHQSIMG----SDHCPVELEIN 252 >gi|254428681|ref|ZP_05042388.1| exodeoxyribonuclease III [Alcanivorax sp. DG881] gi|196194850|gb|EDX89809.1| exodeoxyribonuclease III [Alcanivorax sp. DG881] Length = 271 Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats. Identities = 72/270 (26%), Positives = 125/270 (46%), Gaps = 11/270 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 +T+ ++N+N IRAR+H L I + P +I LQETK D FP + ++ + YH GQK Sbjct: 1 MTLISFNINGIRARLHQLQTVIDKYQPALIGLQETKVHDPEFPEQAVRDMGYHPYFFGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL--RIGNLYLPHGNPITS 121 + GVA++++ + P D+ D Q R I T + +L + + N Sbjct: 61 GHYGVALITREPLESVQYGFPTDEEDAQRRMIIGTLKHSDGSLITVLNGYFPQGENREHP 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175 TK+ K + + + + + + GD+NI + E F Sbjct: 121 TKFPAKKKFYEDLQHYLINHHQPSDQVAVMGDFNISSTDLDIGIGEANRKRWLREGKTSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKN--KGIRIDHIMLSPEA 232 E R+ +++L G TD R + T ++S++DY + + + +G+RID ++ + Sbjct: 181 LPEEREWWERLVGWGLTDTYRHQNPSTDDVFSWFDYRSKGFDREPRRGLRIDTVLATQPL 240 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + L + +D RG KPSDH PV + Sbjct: 241 MAKLDTTGVDYDMRGMEKPSDHCPVWARFN 270 >gi|315452849|ref|YP_004073119.1| exodeoxyribonuclease [Helicobacter felis ATCC 49179] gi|315131901|emb|CBY82529.1| exodeoxyribonuclease [Helicobacter felis ATCC 49179] Length = 255 Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats. Identities = 65/262 (24%), Positives = 111/262 (42%), Gaps = 13/262 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + ++ ++ DI C+QETK + F ++ + + + Sbjct: 1 MRLVSWNVNGLRACMQKGFKDFLLKSGADIFCVQETKMQPDQADF-VFENYHAFWNSAQK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+GV LSK P+++ L ++ D + R I + + + G Sbjct: 60 KGYSGVLTLSKSAPLDVRYGLGLEEHDTEGRVITCEYE-YFYLVNVYTPNSQRGLLRLPY 118 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + R Q L + ++ GD N+ D NP +A F+ R + Sbjct: 119 RLQ-----WESVFREFLQNLASHKEVLICGDLNVAHTEIDLTNPQSNRYNAGFSDPERNA 173 Query: 183 FQKLQNMGFTDAIRATHDTHHL-YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L +G D R + Y++W Y S ++N G RID+ + S S L A I Sbjct: 174 FGQLLQLGLIDTYRHFYPDKTEVYTWWSYMNQSRARNIGWRIDYFLASQGLRSQLKDACI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 G SDH PV + + I Sbjct: 234 YAHILG----SDHCPVGLEMSI 251 >gi|313682316|ref|YP_004060054.1| exodeoxyribonuclease iii [Sulfuricurvum kujiense DSM 16994] gi|313155176|gb|ADR33854.1| exodeoxyribonuclease III [Sulfuricurvum kujiense DSM 16994] Length = 258 Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats. Identities = 74/262 (28%), Positives = 107/262 (40%), Gaps = 14/262 (5%) Query: 6 VATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL--NYHIETCGQ 62 + +WNVN IRA W++E P I+CLQE K + P N + + + Sbjct: 7 IISWNVNGIRAVAEKGGFDWLEERQPHIVCLQEIKALSEQIPQNLFSHHFSNITVNSAEK 66 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G SK +PI T D ++ I + N Sbjct: 67 KGYSGTLTASKLEPIYSDTRADIDIMNEGRIVEHHYGDIALFNVYFPN------GQKDEE 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + K+ + +RFL + + +I GD N +P D NP E + F R Sbjct: 121 RLAYKLEFYERFLDYCEALRREGKKIIICGDVNTAHRPIDLKNPKSNEKTSGFLPIERDW 180 Query: 183 FQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 KL + G+ D R H D + YS+W Y + SKN G RID+ +S + L A I Sbjct: 181 IDKLLSHGYIDTFRHVHGDKENEYSWWSYRFSARSKNVGWRIDYFFISDDLAESLEDAFI 240 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 + G SDH PV + L I Sbjct: 241 LQEIMG----SDHCPVGIRLKI 258 >gi|257054579|ref|YP_003132411.1| exodeoxyribonuclease III [Saccharomonospora viridis DSM 43017] gi|256584451|gb|ACU95584.1| exodeoxyribonuclease III [Saccharomonospora viridis DSM 43017] Length = 265 Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats. Identities = 51/266 (19%), Positives = 101/266 (37%), Gaps = 6/266 (2%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET-- 59 ++TV+T NVN +RA + W + + D++ QE + + P + +H Sbjct: 1 MLTVSTVNVNGLRAAAKKGFSEWFEATSADVVACQEVRADPGVLPDALREPPGWHTVHAA 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 C K NGV + S+ +P + + + R++E + G P Sbjct: 61 CATKGRNGVCLYSRIEPESVRVGFGEAEFEDSGRYVEMWLPRVVVG-SLYLPSGEVGTPR 119 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K +++ + + ++ GD+NI D N ++ F E Sbjct: 120 QEEKERFMDTFLPYLATLRDKASSEGKEVLVVGDWNIAHAEVDLKNWKANRKNSGFLPEE 179 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHL--YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 R ++ + ++ D Y++W Y ++ + G RID+ + +P Sbjct: 180 RAWLSRVFDELGYVDVQRHLDPEGPGPYTWWSYRGRAFDNDAGWRIDYQIATPGLAQRCT 239 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263 S ++ + SDH PV + +I Sbjct: 240 SMVVERAESYDKRWSDHAPVTATYEI 265 >gi|313202195|ref|YP_004040853.1| exodeoxyribonuclease III xth [Methylovorus sp. MP688] gi|312441511|gb|ADQ85617.1| exodeoxyribonuclease III Xth [Methylovorus sp. MP688] Length = 260 Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats. Identities = 72/267 (26%), Positives = 122/267 (45%), Gaps = 15/267 (5%) Query: 1 MSVVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HI 57 MS+ + + N+N IR A W+++ N DI+C+QE K + + E L Y + Sbjct: 1 MSLYRIISANLNGIRSAANKGFYPWLQQQNADIVCMQELKAQLADMTPEMLNPEGYFGYF 60 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 +K Y+GV I ++ QP ++ L D+D + R++E + L + +LYLP G+ Sbjct: 61 HYAEKKGYSGVGIYTRVQPDAVIVGLGIADIDAEGRYLE----LQFGNLSVVSLYLPSGS 116 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + K S + RFL ++ GD+NI + D N + ++ F Sbjct: 117 -SGEERQAFKFSVMTRFLVHLEALRAAGRDVVICGDWNIAHKEADLKNWKGNKKNSGFLP 175 Query: 178 EVRQSFQKLQNM-GFTDAIRATHDT--HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R L + G+ D R H Y++W +W+KN G RID+ + +P+ + Sbjct: 176 EERAWLTDLFDRVGWVDVYRVLHPDTTDECYTWWSNRGQAWAKNVGWRIDYQIATPDFAA 235 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261 +A I + SDH P+I+ Sbjct: 236 KAIAASIYK----LERFSDHAPLIIDY 258 >gi|260578461|ref|ZP_05846375.1| exodeoxyribonuclease III [Corynebacterium jeikeium ATCC 43734] gi|258603483|gb|EEW16746.1| exodeoxyribonuclease III [Corynebacterium jeikeium ATCC 43734] Length = 266 Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats. Identities = 75/271 (27%), Positives = 121/271 (44%), Gaps = 18/271 (6%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+NS+R R + +++ ++ D++CLQETK DK FP Y G Sbjct: 1 MRIATWNINSVRTREDRVREFLQRSDVDVLCLQETKCTDKQFP--DFTDTGYEQAHFGLH 58 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQ----ARFIEATFTINTQTLRIGNLYLPHGNPI 119 S+NGVAILS+ ++ T + + + +LY+P+G I Sbjct: 59 SFNGVAILSRVGLTDVQTDFGQPGFNKDLDAEQALEARAIGAICGGVEVWSLYVPNGREI 118 Query: 120 TSTKYDDKISWIKRFLRFA------SQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 Y K+ W+ +A + + + E L GDYNI P+ D ++ ++ Sbjct: 119 ADPHYSYKLRWLDALAAYAAGSGVGASQRKSSEKLCLVGDYNIAPRDEDVWDRSYFDGRT 178 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 T R + L++ G + A Y++WDY A + K +G+RID T Sbjct: 179 HVTPNERARLRALEDAGLSAATDLI---ADEYTYWDYQAMRFQKGEGMRIDLQYA-RGIT 234 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 +AR+D R SDH PVIV ++ Sbjct: 235 P--TAARVDRDERKGKGASDHAPVIVDYNVD 263 >gi|148259431|ref|YP_001233558.1| exodeoxyribonuclease III Xth [Acidiphilium cryptum JF-5] gi|146401112|gb|ABQ29639.1| exodeoxyribonuclease III Xth [Acidiphilium cryptum JF-5] Length = 267 Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats. Identities = 82/268 (30%), Positives = 117/268 (43%), Gaps = 6/268 (2%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIET 59 M+ +TVATWN+NS+R R L + + + PDI+CLQETK D FP + +L H+ Sbjct: 1 MTALTVATWNINSVRLRRDLLHSLMDQAAPDIVCLQETKVPDDLFPEDLGTALGLPHVLK 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 G K YNGVAILS+ + P + R I A T L + N Y+P G I Sbjct: 61 RGMKGYNGVAILSRLPLTAVE-DTPDWCMKSDCRHIAARIDTGTDPLVLHNFYVPAGGDI 119 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFA--GDYNIIPQPHDCYNPIIWENDACF-T 176 + K F+ A + P GD NI P +D ++ N Sbjct: 120 PDRAENPKYGHKLDFIAEARDHFAMNRPHRTMLVGDLNIAPLENDVWSHKQLLNVVSHTP 179 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSL 235 E D L+++W Y W + N+G R+DHI +S + Sbjct: 180 PETEGLNAWRTEGFIDAIRHFVPDDQKLFTWWSYRNRDWRASNRGRRLDHIWVSTDLIGN 239 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 L I R W + SDH PV+++LD+ Sbjct: 240 LARHAILQDARDWERGSDHVPVVLTLDL 267 >gi|289450732|ref|YP_003475042.1| exodeoxyribonuclease III [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289185279|gb|ADC91704.1| exodeoxyribonuclease III [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 251 Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats. Identities = 75/262 (28%), Positives = 114/262 (43%), Gaps = 13/262 (4%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + +WNVN +RA + ++ + DIIC+QE+K + + L + Sbjct: 1 MTKLISWNVNGLRACVEKGFVESMQHLSADIICIQESKLQAGQIDLD-LPGYCQYWNYAR 59 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G AI SK +P+ + + D D + R I A F + G Sbjct: 60 KKGYSGTAIFSKIEPLRVTYGMNMPDHDQEGRLITAEFPDYYLC-TVYTPNSQDGLKRLV 118 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + +R Q L +P+I GD N+ + D NP + FT E R Sbjct: 119 YRQ-----SWERDFLTYLQELRRVKPVIICGDLNVAHREIDLKNPAANRKNPGFTDEERA 173 Query: 182 SFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 FQ L + GF D R + YS+W Y ++ S+N G RID+ ++S E T L SA Sbjct: 174 EFQTLLDAGFVDTFRYFYPEKPEEYSWWSYRFNARSRNAGWRIDYFLVSNELTDRLQSAS 233 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I + G SDH PV + L Sbjct: 234 IHQEIFG----SDHCPVELILK 251 >gi|294678851|ref|YP_003579466.1| exodeoxyribonuclease III [Rhodobacter capsulatus SB 1003] gi|294477671|gb|ADE87059.1| exodeoxyribonuclease III-2 [Rhodobacter capsulatus SB 1003] Length = 262 Score = 172 bits (436), Expect = 4e-41, Method: Composition-based stats. Identities = 86/268 (32%), Positives = 116/268 (43%), Gaps = 11/268 (4%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIET 59 MS T+ATWN+NS+R R + + E PD++CLQE K+ PF L Y + Sbjct: 1 MS-FTLATWNINSVRLREALVCKLMTEEAPDVLCLQECKSPVDKIPFAAFAELGYRYHVA 59 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 GQK YNGVAILSK +E + + + I N Y+P G I Sbjct: 60 RGQKGYNGVAILSKLPMVEAGAGDYANLGHARHIAGRLENG-----VTIHNFYVPAGGDI 114 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL 177 ++K FL + P GD NI P+ D +N T Sbjct: 115 PDRAENEKFGQKLDFLSHMRDDFHAQRPDRAILVGDLNIAPREDDVWNHKALLKIVSHTP 174 Query: 178 -EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSL 235 EV G+ D RA LYS+W Y + W +KG R+DHI +P+ Sbjct: 175 IEVEHLAAAQDAGGWVDVTRADIPEGQLYSWWSYRSPDWDGADKGRRLDHIWATPDIAGA 234 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 H +RI RGW +PSDH PV + D+ Sbjct: 235 AHGSRILRAARGWEQPSDHAPVFATFDL 262 >gi|46201082|ref|ZP_00055781.2| COG0708: Exonuclease III [Magnetospirillum magnetotacticum MS-1] Length = 263 Score = 172 bits (436), Expect = 5e-41, Method: Composition-based stats. Identities = 78/264 (29%), Positives = 119/264 (45%), Gaps = 5/264 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62 + + TWN+NSIR RI L+ NPDIICLQE K +D FP + + + + HI G Sbjct: 1 MRLVTWNINSIRLRIDLLSQVASVMNPDIICLQEIKVDDPLFPLDQCREMGFGHIAFHGM 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K YNGVAILS+ E D + + L I +P T+ Sbjct: 61 KGYNGVAILSRLPIAEWRPMSRCGRDDRRHLMARLENGVQIHCLYIPAG-GDIPDPETND 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K+ K+ +++ +A+ + E+ +I AGD+NI P +D ++ T Sbjct: 120 KFAHKLDFVREITAWAAAEIRPEDKVILAGDFNIAPLENDVWSHKQMLKVISHTPAEVDL 179 Query: 183 FQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSWSKN-KGIRIDHIMLSPEATSLLHSA 239 LY++W Y + W KN +G R+DH+ ++P L Sbjct: 180 LNAFLASVPFVDAMRHFVPPEDKLYTWWSYRSPDWQKNDRGRRLDHVWVTPALAPSLRGM 239 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 + + R WT+PSDH PV+V D+ Sbjct: 240 LVAREARAWTQPSDHVPVMVDFDL 263 >gi|48477699|ref|YP_023405.1| exodeoxyribonuclease III [Picrophilus torridus DSM 9790] gi|48430347|gb|AAT43212.1| exodeoxyribonuclease III [Picrophilus torridus DSM 9790] Length = 250 Score = 172 bits (436), Expect = 5e-41, Method: Composition-based stats. Identities = 80/259 (30%), Positives = 126/259 (48%), Gaps = 14/259 (5%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + +WNVN IRA + + +I E NPDI+ LQE K+ + P E L + Y I Sbjct: 1 MKILSWNVNGIRAAVKNGILNFINEENPDIVLLQEIKSGKNDLP-EELHHMGYKIFINPA 59 Query: 62 -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+G LSK +P++ + + D D + R + I N Y P+ Sbjct: 60 EKKGYSGTMALSKVEPLDYSSGIGIKDYDSEGRVQILKYD----NFYIINTYFPNSQH-G 114 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 T+ D KI + +FL F + L E+PLI GD+N+ + D P EN+A FT++ R Sbjct: 115 LTRLDYKIDFDNKFLEFCEK-LRKEKPLIITGDFNVAHEEIDIARPKDNENNAGFTIQER 173 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + N G+ D R H YS+W Y ++ +KN G RID+ +++ + + + Sbjct: 174 NWMTEFLNHGYIDTYRYFHKEPGHYSWWSYRFNARAKNIGWRIDYFIVTDDFIKNVKDSI 233 Query: 241 IDTKPRGWTKPSDHTPVIV 259 I K SDH P+ + Sbjct: 234 ILENV----KGSDHAPLEL 248 >gi|311742697|ref|ZP_07716506.1| exodeoxyribonuclease III [Aeromicrobium marinum DSM 15272] gi|311314325|gb|EFQ84233.1| exodeoxyribonuclease III [Aeromicrobium marinum DSM 15272] Length = 274 Score = 172 bits (436), Expect = 5e-41, Method: Composition-based stats. Identities = 64/273 (23%), Positives = 111/273 (40%), Gaps = 12/273 (4%) Query: 2 SVVTVATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 +V+ +AT NVN +RA + LA W+ + D++ LQE + D E L Sbjct: 3 AVLRIATVNVNGVRAAWNKSRGQTSGLAEWLAGRDADVVTLQEVRAPDA-LVRELLAGTG 61 Query: 55 YHIETCGQ--KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 YH+ K GVA+LS+ +P+ + D R+IEA + ++ Sbjct: 62 YHVAHTEAAAKGRAGVAVLSRVEPVAVRVGNGDAFFDDSGRWIEADVPLADGSVLTVVSA 121 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 H + + D+K +++R ++ + GD N+ P D N Sbjct: 122 YVHSGEAGTPRQDEKYRFLERTGARMAEISASGTHGLLTGDLNVAHTPRDIRNAKGNLKK 181 Query: 173 ACFTLEVRQSFQKLQNM--GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230 A F E R F + + R D Y++W ++ + G RIDH + +P Sbjct: 182 AGFLPEERAHFDRWFDELGWVDVPRRLAGDVDGPYTWWSMRGQAFDNDTGWRIDHQIATP 241 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + + +A +D + SDH P++V + Sbjct: 242 DLATAATTAAVDRAESWAERWSDHAPLVVDYAL 274 >gi|42527240|ref|NP_972338.1| exodeoxyribonuclease III [Treponema denticola ATCC 35405] gi|41817664|gb|AAS12249.1| exodeoxyribonuclease III [Treponema denticola ATCC 35405] Length = 256 Score = 172 bits (436), Expect = 5e-41, Method: Composition-based stats. Identities = 61/259 (23%), Positives = 103/259 (39%), Gaps = 17/259 (6%) Query: 6 VATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS------LNYHIE 58 + +WNVN IRA W+ NPD++C+QETK E + + Sbjct: 4 IISWNVNGIRAVEKKGFLDWLNTENPDVLCVQETKAAKAQLSKELTEPDLPNGKYFAYWA 63 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + + Y+G AI +K +P+++ T + D + ++ + Sbjct: 64 SAKKAGYSGTAIFTKKEPLQVRTMGLKEFDDEGRVLVADFDKVS------IISAYFPNSQ 117 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + D K+ + L F E +I GD+NI +P D NP E + + E Sbjct: 118 DGGARLDYKLDFCAAILEFCDSVQEEGNNVILCGDFNIAHKPIDLANPKSNEKNPGYLPE 177 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R + + G+TD R Y++W Y + KN G R+D+ ++ + + Sbjct: 178 ERAWMDEFTSSGYTDTFRHFCKEPAKYTWWSYRFRAREKNIGWRLDYHCVNDSFLAKIKE 237 Query: 239 ARIDTKPRGWTKPSDHTPV 257 + I G SDH PV Sbjct: 238 SIILDGVMG----SDHCPV 252 >gi|258539213|ref|YP_003173712.1| exodeoxyribonuclease III [Lactobacillus rhamnosus Lc 705] gi|257150889|emb|CAR89861.1| Exodeoxyribonuclease III [Lactobacillus rhamnosus Lc 705] Length = 252 Score = 172 bits (436), Expect = 5e-41, Method: Composition-based stats. Identities = 66/257 (25%), Positives = 107/257 (41%), Gaps = 12/257 (4%) Query: 4 VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + E + D CLQETK + + L + + Sbjct: 1 MKMISWNVNGLRAVLKKDFMTIFNELDADWFCLQETKMQAGQVELD-LPGYYQYFNYAER 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K++P+ + + + D + R I + + Sbjct: 60 KGYSGTAIFTKHKPLNVTYGMGIPEHDTEGRIITLEYPKFYLMTVYTPNSGGELKRLDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + R + L ++PL++ GD N+ +P D N ++A FT E R Sbjct: 120 QQ------WDRDFLAYTNELAAKKPLVYCGDLNVAHEPIDLKNDKTNHHNAGFTDEERAD 173 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F K N GF D R + YS+W Y + + N G RID+ + S + A+I Sbjct: 174 FTKQLNSGFIDTFRHFYPDTVTYSWWSYRFHARANNAGWRIDYFVASSAFQPYIQDAKIL 233 Query: 243 TKPRGWTKPSDHTPVIV 259 T+ G SDH PV + Sbjct: 234 TQIMG----SDHCPVEL 246 >gi|223278420|ref|NP_001138591.1| DNA-(apurinic or apyrimidinic site) lyase [Canis lupus familiaris] Length = 318 Score = 172 bits (436), Expect = 5e-41, Method: Composition-based stats. Identities = 73/269 (27%), Positives = 125/269 (46%), Gaps = 17/269 (6%) Query: 2 SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN----YH 56 + + + +WNV+ +RA I W+KE PDI+CLQETK + P E + Y Sbjct: 60 ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLPHQYW 119 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 ++ Y+GV +LS+ P+++ + ++ D + R I A F + + G Sbjct: 120 SAPSDKEGYSGVGLLSRQCPLKVSYGIGEEEHDQEGRVIVAEFDTF---VLVTAYVPNAG 176 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + +Y + R + L +PL+ GD N+ + D NP + +A FT Sbjct: 177 RGLVRLEYRQRWDEAFRKF---LKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 233 Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E + + LQ + D+ R + + Y+FW Y ++ SKN G R+D+ +LS Sbjct: 234 PQERQGFGELLQAVPLADSFRHLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLP 293 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 L ++I +K G SDH P+ + L + Sbjct: 294 ALCDSKIRSKALG----SDHCPITLYLAL 318 >gi|255327369|ref|ZP_05368443.1| exodeoxyribonuclease III [Rothia mucilaginosa ATCC 25296] gi|255295649|gb|EET74992.1| exodeoxyribonuclease III [Rothia mucilaginosa ATCC 25296] Length = 291 Score = 172 bits (436), Expect = 5e-41, Method: Composition-based stats. Identities = 66/279 (23%), Positives = 113/279 (40%), Gaps = 17/279 (6%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC- 60 ++ VA+ NVN IRA ++AAW+ + DI+CLQE + D E L +HI Sbjct: 14 LLRVASVNVNGIRAAYKKDMAAWLASRDIDILCLQEVRAPDA-IVRELLDESQWHILHAE 72 Query: 61 ------------GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108 +++ N L + QP+ +++ + D R++EA + + Sbjct: 73 AAAKGRAGVLVATRRTPNSAGELLENQPVATRSNIGEEYFDDSGRWVEADYVLPNGKTLT 132 Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168 H + + K DDK +++R L + + + ++ GD N+ D N Sbjct: 133 VVSAYVHSGEVGTQKQDDKYRFLERMLVRMPELAKHSDHVLIVGDLNVGHTELDIKNWKA 192 Query: 169 WENDACFTLEVRQSFQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226 + A F E R F + A Y++W Y ++ + G RID+ Sbjct: 193 NQKRAGFLPEERAYFDRFFGDIGYRDVARELAGQVPGPYTWWSYRGKAFDNDAGWRIDYH 252 Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 M +P A +D + SDH P++V I E Sbjct: 253 MATPALAESAVEAVVDRAASYDERFSDHAPLVVDYRIGE 291 >gi|227498619|ref|ZP_03928763.1| conserved hypothetical protein [Acidaminococcus sp. D21] gi|226904075|gb|EEH89993.1| conserved hypothetical protein [Acidaminococcus sp. D21] Length = 251 Score = 172 bits (436), Expect = 5e-41, Method: Composition-based stats. Identities = 64/260 (24%), Positives = 115/260 (44%), Gaps = 13/260 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + TWNVN +RA + +++ + DII +QETK + + F+ + + + Sbjct: 1 MKLVTWNVNGLRACMNKGFKESMEKLDADIISIQETKMQREQASFD-FPGYYEYWNSAVK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI S+ +P+ + L ++ D + R I A + + N+Y P+ + Sbjct: 60 KGYSGTAIFSRIKPLSVTYGLGIEEHDQEGRVITAEYD----DFYLVNVYTPNSQRELAR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + + L ++ I GD N+ +P D NP ++A F+ E RQ Sbjct: 116 L--SYRMAWEDAFQAYCEDLSKKKTTIVCGDMNVAHEPIDLKNPDSNHHNAGFSDEERQK 173 Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 GF D+ R + Y++W Y + +N G RID+ ++S + I Sbjct: 174 LDAFLARGFVDSFRMLYPDREGAYTWWSYMFKARERNAGWRIDYFLVSEAGRDKIRDVTI 233 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 + G SDH PV++ Sbjct: 234 MNEIMG----SDHCPVVLEY 249 >gi|327278208|ref|XP_003223854.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like isoform 1 [Anolis carolinensis] Length = 314 Score = 172 bits (436), Expect = 5e-41, Method: Composition-based stats. Identities = 78/263 (29%), Positives = 123/263 (46%), Gaps = 16/263 (6%) Query: 3 VVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQ----SLNYHI 57 + V +WNV+ IRA + W+ E NPDI+CLQETK +K P + Y Sbjct: 58 TLKVTSWNVDGIRAWVKKKGVEWVSEENPDILCLQETKCAEKQLPADIRDLAEYPHKYWA 117 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 + ++ Y+GVA+LSK +P+E+ + ++ D + R I A F + + G Sbjct: 118 CSEDKEGYSGVALLSKVKPLEVKYGIGEEEHDKEGRVITAEFP---SYFLVTSYVPNAGR 174 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + +Y R + L +PLI GD N+ + D NP + +A FT Sbjct: 175 GLVRLEYRQSWDVAFRSY---LKGLAARKPLILCGDLNVAHEEIDLKNPKGNKKNAGFTP 231 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 E R F KL GF D R + + Y+FW Y ++ SKN G R+D+ ++S + + Sbjct: 232 EERAGFTKLLEEGFVDTFRHLYPDTAYAYTFWTYMMNARSKNVGWRLDYFVVSKDLQESI 291 Query: 237 HSARIDTKPRGWTKPSDHTPVIV 259 ++I R SDH P+ + Sbjct: 292 CDSKI----RSTALGSDHCPITL 310 >gi|284035454|ref|YP_003385384.1| exodeoxyribonuclease III Xth [Spirosoma linguale DSM 74] gi|283814747|gb|ADB36585.1| exodeoxyribonuclease III Xth [Spirosoma linguale DSM 74] Length = 254 Score = 172 bits (435), Expect = 5e-41, Method: Composition-based stats. Identities = 70/263 (26%), Positives = 107/263 (40%), Gaps = 12/263 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60 + + ++N+N IRA I L W+ +N DI+C QE K + L Y H Sbjct: 1 MQLISYNINGIRAAIRNGLLDWLAQNQFDILCFQEVKATTDVVDLSVFEQLGYQYHWHAA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GVA SK P +V D + R + F T Sbjct: 61 EKKGYSGVATFSKIAPTNVVLGCGLPVYDCEGRILRTDFGDLTL-----LNCYFPSGTTG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K+ +++ F +F + + +I GDYNI D ++P+ +N F E R Sbjct: 116 EVRQGVKMEFLRDFYQFVQELRKERPKVIVVGDYNIAHNAIDIHDPVRNKNTTGFLPEER 175 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 G TD R H T YS+W Y A + + NKG RID+ L+ + Sbjct: 176 AWMDSWFGSGMTDGFRYKHPTDVAYSWWSYRAGARTNNKGWRIDYASLTDNLRDRIIDCA 235 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263 + DH PV ++LD+ Sbjct: 236 MLPDAVHA----DHCPVCLNLDL 254 >gi|187735459|ref|YP_001877571.1| exodeoxyribonuclease III Xth [Akkermansia muciniphila ATCC BAA-835] gi|187425511|gb|ACD04790.1| exodeoxyribonuclease III Xth [Akkermansia muciniphila ATCC BAA-835] Length = 253 Score = 172 bits (435), Expect = 5e-41, Method: Composition-based stats. Identities = 68/262 (25%), Positives = 109/262 (41%), Gaps = 13/262 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL-NYHIETCG 61 + + +WNVN +RA + +A + PD++CLQE K + + S + Sbjct: 1 MKLVSWNVNGLRAVLGKGMADAVDALEPDVLCLQEIKARPEQVKDLWISSWPHQLWNPAE 60 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 + Y+GV ILS+ +P+ + + D + R F + Sbjct: 61 KAGYSGVLILSRVRPLSTSVGIGWPEHDREGRVCTMEFEGFYL-----VNCYTPNSQNEL 115 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + + W F + + L +P++F GD N+ + D P A F+ + R Sbjct: 116 VRLPYREQWDAAFREYVAG-LAETKPVVFCGDLNVAHEEIDIARPKENRFSAGFSDQERA 174 Query: 182 SFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 F L GFTD RA H YS+W Y A + ++N G RID+ +S S + A Sbjct: 175 GFTLLLEAGFTDTFRALHPEEPGWYSWWSYRAGARARNIGWRIDYFCVSNPLASRVKDAA 234 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I G SDH PV + +D Sbjct: 235 IHPDVTG----SDHCPVSLEID 252 >gi|283458671|ref|YP_003363306.1| exonuclease III [Rothia mucilaginosa DY-18] gi|283134721|dbj|BAI65486.1| exonuclease III [Rothia mucilaginosa DY-18] Length = 291 Score = 172 bits (435), Expect = 5e-41, Method: Composition-based stats. Identities = 65/279 (23%), Positives = 113/279 (40%), Gaps = 17/279 (6%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC- 60 ++ VA+ NVN IRA ++AAW+ + DI+CLQE + D E L +HI Sbjct: 14 LLRVASVNVNGIRAAYKKDMAAWLASRDIDILCLQEVRAPDA-IVRELLDESQWHILHAE 72 Query: 61 ------------GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108 +++ N + + QP+ +++ + D R++EA + + Sbjct: 73 AAAKGRAGVLVATRRTPNSAGEVLENQPVATRSNIGEEYFDDSGRWVEADYVLPNGKTLT 132 Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168 H + + K DDK +++R L + + + ++ GD N+ D N Sbjct: 133 VVSAYVHSGEVGTQKQDDKYRFLERMLVRMPELAKHSDHVLIVGDLNVGHTELDIKNWKA 192 Query: 169 WENDACFTLEVRQSFQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226 + A F E R F + A Y++W Y ++ + G RID+ Sbjct: 193 NQKRAGFLPEERAYFDRFFGDIGYRDVARELAGQVPGPYTWWSYRGKAFDNDAGWRIDYH 252 Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 M +P A +D + SDH P++V I E Sbjct: 253 MATPALAESAVEAVVDRAASYDERFSDHAPLVVDYRIGE 291 >gi|213021237|ref|NP_001132943.1| DNA-(apurinic or apyrimidinic site) lyase [Sus scrofa] gi|210062866|gb|ACJ06403.1| APEX nuclease 1 [Sus scrofa] Length = 318 Score = 172 bits (435), Expect = 5e-41, Method: Composition-based stats. Identities = 73/269 (27%), Positives = 125/269 (46%), Gaps = 17/269 (6%) Query: 2 SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQ----SLNYH 56 + + + +WNV+ +RA I W+KE PDI+CLQETK + P E + Y Sbjct: 60 ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELSGLPHQYW 119 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 ++ Y+GV +LS+ P+++ + ++ D + R I A F + + G Sbjct: 120 SAPSDKEGYSGVGLLSRQCPLKVSYGIGEEEHDQEGRVIVAEF---DAFVLVTAYVPNAG 176 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + +Y + R + L +PL+ GD N+ + D NP + +A FT Sbjct: 177 RGLVRLEYRQRWDEAFRKF---LKGLASHKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 233 Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E + + LQ + D+ R + + Y+FW Y ++ SKN G R+D+ +LS Sbjct: 234 PQERQGFGELLQAVPLADSFRHLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLP 293 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 L ++I +K G SDH P+ + L + Sbjct: 294 ALCDSKIRSKALG----SDHCPITLYLAL 318 >gi|6753086|ref|NP_033817.1| DNA-(apurinic or apyrimidinic site) lyase [Mus musculus] gi|113985|sp|P28352|APEX1_MOUSE RecName: Full=DNA-(apurinic or apyrimidinic site) lyase; AltName: Full=APEX nuclease; Short=APEN; AltName: Full=Apurinic-apyrimidinic endonuclease 1; Short=AP endonuclease 1; AltName: Full=REF-1; AltName: Full=Redox factor-1; Contains: RecName: Full=DNA-(apurinic or apyrimidinic site) lyase, mitochondrial gi|220337|dbj|BAA14382.1| APEX nuclease precursor [Mus musculus] gi|533108|gb|AAC13769.1| apurinic/apyrimidinic endonuclease [Mus musculus] gi|533329|dbj|BAA07270.1| APEX nuclease [Mus musculus] gi|12850573|dbj|BAB28774.1| unnamed protein product [Mus musculus] gi|30851442|gb|AAH52401.1| Apurinic/apyrimidinic endonuclease 1 [Mus musculus] gi|148688888|gb|EDL20835.1| apurinic/apyrimidinic endonuclease 1 [Mus musculus] Length = 317 Score = 172 bits (435), Expect = 6e-41, Method: Composition-based stats. Identities = 73/269 (27%), Positives = 125/269 (46%), Gaps = 17/269 (6%) Query: 2 SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN----YH 56 + + + +WNV+ +RA I W+KE PDI+CLQETK + P E + Y Sbjct: 59 ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLTHQYW 118 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 ++ Y+GV +LS+ P+++ + ++ D + R I A F + + G Sbjct: 119 SAPSDKEGYSGVGLLSRQCPLKVSYGIGEEEHDQEGRVIVAEFE---SFVLVTAYVPNAG 175 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + +Y + R + L +PL+ GD N+ + D NP + +A FT Sbjct: 176 RGLVRLEYRQRWDEAFRKF---LKDLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 232 Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E + + LQ + D+ R + + Y+FW Y ++ SKN G R+D+ +LS Sbjct: 233 PQERQGFGELLQAVPLADSFRHLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLP 292 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 L ++I +K G SDH P+ + L + Sbjct: 293 ALCDSKIRSKALG----SDHCPITLYLAL 317 >gi|126277963|ref|XP_001379263.1| PREDICTED: similar to APEX nuclease (multifunctional DNA repair enzyme) 1 [Monodelphis domestica] Length = 385 Score = 172 bits (435), Expect = 6e-41, Method: Composition-based stats. Identities = 76/269 (28%), Positives = 126/269 (46%), Gaps = 17/269 (6%) Query: 2 SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFE--TLQSLNYHIE 58 S + + +WNV+ +RA I W+KE PDI+CLQETK + P E L L Y Sbjct: 127 STLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSESKLPPELQDLPGLTYQYW 186 Query: 59 TCGQKS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 + Y+GV +LS+ P+ + + ++ D + R I A F + + G Sbjct: 187 SSPSDKEGYSGVGLLSRQCPLSVTYGIGEEEHDQEGRVIVAEFEAF---VLVTAYVPNAG 243 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + +Y + R + L ++PL+ GD N+ + D NP + +A FT Sbjct: 244 RGLVRLEYRQRWDEAFRKF---LKGLSAKKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 300 Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E + + LQ + TD+ R + + Y+FW Y ++ +KN G R+D+ +LS Sbjct: 301 PQERQGFGELLQAVPLTDSFRHLYPEAAYAYTFWTYMMNARAKNVGWRLDYFLLSQALLP 360 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 L ++I +K G SDH P+ + L + Sbjct: 361 ALCDSKIRSKALG----SDHCPITLLLAL 385 >gi|260574458|ref|ZP_05842462.1| exodeoxyribonuclease III Xth [Rhodobacter sp. SW2] gi|259023354|gb|EEW26646.1| exodeoxyribonuclease III Xth [Rhodobacter sp. SW2] Length = 262 Score = 172 bits (435), Expect = 6e-41, Method: Composition-based stats. Identities = 88/264 (33%), Positives = 122/264 (46%), Gaps = 10/264 (3%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQK 63 T+ATWN+NS+R R +A + E PDI+CLQE K+ P E Q+L Y ++ GQK Sbjct: 4 TLATWNINSVRLREGLVARLMAEEAPDILCLQECKSPVDKIPLEQFQALGYRYMVARGQK 63 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 YNGVAILSK ++ + + I N Y+P G I Sbjct: 64 GYNGVAILSKLPIMDAGDRDFASMGHARHVAARLENG-----VTIHNCYVPAGGDIPDRD 118 Query: 124 YDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180 ++K FL E+P GD NI P+ D ++ T EV Sbjct: 119 QNEKFGQKLDFLTEMRDWCRWEKPDRAILVGDLNIAPREDDVWSHKALLKIVSHTPIEVD 178 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLLHSA 239 ++ + D RA LYS+W Y A W + +KG R+DHI +P+ S HS+ Sbjct: 179 HLTAVMEAGSWVDVTRADIPEGPLYSWWSYRAAEWGAADKGRRLDHIWATPDIASAAHSS 238 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 RI RGW +PSDH PV + D+ Sbjct: 239 RILRAARGWQQPSDHAPVFATFDL 262 >gi|50843350|ref|YP_056577.1| exodeoxyribonuclease III [Propionibacterium acnes KPA171202] gi|50840952|gb|AAT83619.1| exodeoxyribonuclease III [Propionibacterium acnes KPA171202] gi|315106020|gb|EFT77996.1| exodeoxyribonuclease III [Propionibacterium acnes HL030PA1] Length = 297 Score = 172 bits (435), Expect = 6e-41, Method: Composition-based stats. Identities = 62/297 (20%), Positives = 106/297 (35%), Gaps = 37/297 (12%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +A++N+N IRA + + W++ + D+I LQE + + P + Sbjct: 1 MRIASFNINGIRAALKRGFSEWMEARDCDVIGLQEVRCRPADLPEGAFGDRHVSWAPGSL 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDL------------------------DVQARFIEAT 98 NGVA+L++ P E+ + + Sbjct: 61 AGRNGVALLTRTAPAEVRSWGTHLVMAPGQAPTPAQALTGNTDGLPTELLPFADEGRYIE 120 Query: 99 FTINTQTLRIGNLYLPHGNPITS----------TKYDDKISWIKRFLRFASQRLELEEPL 148 + L + LYLP G K + +R + Sbjct: 121 VDLADTPLTVACLYLPKGATPDPANEKTIAKQDRKMAFLTGFRDHLVRRRQECTTQGRHF 180 Query: 149 IFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL--QNMGFTDAIRATHDTHHLYS 206 + GD+NI + D N + + F E RQ F + + DT+ YS Sbjct: 181 LVMGDFNIAHENADLKNWKANQRNEGFLPEERQWFDTILSPDTLIDVVRAQHPDTNGPYS 240 Query: 207 FWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +W + ++ + G RID+ + SPE S +A ID P + SDH V+V D+ Sbjct: 241 WWSWRGKAFVNDAGWRIDYHLASPELASKAITAEIDRDPSYSERTSDHAAVVVDYDL 297 >gi|85717081|ref|ZP_01048042.1| exodeoxyribonuclease III [Nitrobacter sp. Nb-311A] gi|85696119|gb|EAQ34016.1| exodeoxyribonuclease III [Nitrobacter sp. Nb-311A] Length = 257 Score = 172 bits (435), Expect = 6e-41, Method: Composition-based stats. Identities = 83/258 (32%), Positives = 128/258 (49%), Gaps = 3/258 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+N++++ R+ NL W+K + PD++CLQ+ K E+++FP L+ Y QK Sbjct: 1 MKIATFNIDNVNTRLPNLLEWLKHSKPDVVCLQDLKCEERDFPRAALREAGYSAVWESQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 S NGVAILS+ + + L I LYLP GNP + Sbjct: 61 SLNGVAILSRRSHPIVTRRRL---PGDPSDREARYIEAAVGGLLIACLYLPKGNPQPGPE 117 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 +D K+SW+ R + A++ + P + G+YN+ P D + W NDA R++F Sbjct: 118 FDYKMSWLSRLTKHAARLQGQDHPALLVGNYNVAPTDLDMCSTESWTNDARVQQTQRKAF 177 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 L G+TDA+R + +Y+FW Y D + K+ R+DH +LS S L A +D Sbjct: 178 ASLLANGWTDALRDVYRHERVYTFWTYGRDRYEKDHAFRLDHFLLSKAVASRLIKAGVDG 237 Query: 244 KPRGWTKPSDHTPVIVSL 261 R SDH P + L Sbjct: 238 DGRSEKNASDHAPAWIKL 255 >gi|6980832|pdb|1DEW|A Chain A, Crystal Structure Of Human Ape1 Bound To Abasic Dna gi|6980833|pdb|1DEW|B Chain B, Crystal Structure Of Human Ape1 Bound To Abasic Dna Length = 279 Score = 172 bits (435), Expect = 6e-41, Method: Composition-based stats. Identities = 73/269 (27%), Positives = 125/269 (46%), Gaps = 17/269 (6%) Query: 2 SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN----YH 56 + + + +WNV+ +RA I W+KE PDI+CLQETK + P E + Y Sbjct: 21 ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQYW 80 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 ++ Y+GV +LS+ P+++ + ++ D + R I A F + + G Sbjct: 81 SAPSDKEGYSGVGLLSRQCPLKVSYGIGDEEHDQEGRVIVAEF---DSFVLVTAYVPNAG 137 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + +Y + R + L +PL+ GD N+ + D NP + +A FT Sbjct: 138 RGLVRLEYRQRWDEAFRKF---LKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 194 Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E + + LQ + D+ R + + Y+FW Y ++ SKN G R+D+ +LS Sbjct: 195 PQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLP 254 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 L ++I +K G SDH P+ + L + Sbjct: 255 ALCDSKIRSKALG----SDHCPITLYLAL 279 >gi|296214367|ref|XP_002753758.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like isoform 1 [Callithrix jacchus] gi|296214369|ref|XP_002753759.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like isoform 2 [Callithrix jacchus] Length = 318 Score = 172 bits (435), Expect = 6e-41, Method: Composition-based stats. Identities = 73/269 (27%), Positives = 125/269 (46%), Gaps = 17/269 (6%) Query: 2 SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN----YH 56 + + + +WNV+ +RA I W+KE PDI+CLQETK + P E + Y Sbjct: 60 ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLPHQYW 119 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 ++ Y+GV +LS+ P+++ + ++ D + R I A F + + G Sbjct: 120 SAPSDKEGYSGVGLLSRQCPLKVSYGIGEEEHDQEGRVIVAEF---DSFVLVTAYVPNAG 176 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + +Y + R + L +PL+ GD N+ + D NP + +A FT Sbjct: 177 RGLVRLEYRQRWDEAFRKF---LKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 233 Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E + + LQ + D+ R + + Y+FW Y ++ SKN G R+D+ +LS Sbjct: 234 PQERQGFGELLQAVPLADSFRHLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLP 293 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 L ++I +K G SDH P+ + L + Sbjct: 294 ALCDSKIRSKALG----SDHCPITLYLAL 318 >gi|325474290|gb|EGC77478.1| exodeoxyribonuclease III [Treponema denticola F0402] Length = 256 Score = 172 bits (435), Expect = 6e-41, Method: Composition-based stats. Identities = 61/259 (23%), Positives = 104/259 (40%), Gaps = 17/259 (6%) Query: 6 VATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS------LNYHIE 58 + +WNVN IRA W+ NPD++C+QETK E ++ + Sbjct: 4 IISWNVNGIRAVEKKGFLDWLNTENPDVLCVQETKAAKAQLSKELTEADLPNGKYFAYWA 63 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + + Y+G AI +K +P+++ T + D + ++ + Sbjct: 64 SAKKAGYSGTAIFTKKEPLQVRTMGLKEFDDEGRVLVADFDKVS------IISAYFPNSQ 117 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + D K+ + L F E +I GD+NI +P D NP E + + E Sbjct: 118 DGGARLDYKLDFCAAILEFCDSVQEEGNNVILCGDFNIAHKPIDLANPKSNEKNPGYLPE 177 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R + + G+TD R Y++W Y + KN G R+D+ ++ + + Sbjct: 178 ERAWMDEFTSSGYTDTFRHFCQEPAKYTWWSYRFRAREKNIGWRLDYHCVNDSFLAKIKE 237 Query: 239 ARIDTKPRGWTKPSDHTPV 257 + I G SDH PV Sbjct: 238 SIILDGVMG----SDHCPV 252 >gi|257076437|ref|ZP_05570798.1| exodeoxyribonuclease III [Ferroplasma acidarmanus fer1] Length = 252 Score = 172 bits (435), Expect = 6e-41, Method: Composition-based stats. Identities = 72/261 (27%), Positives = 121/261 (46%), Gaps = 12/261 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQ-SLNYHIETCG 61 + + +WNVN IRA + + ++ NPDII LQE K + + P E ++ Sbjct: 1 MKILSWNVNGIRAAVKNGIIKTLENENPDIILLQEAKADKMDIPEELHHTGYKIYVNPAD 60 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G ++K +P+ T ++ DV+ R + + N Y P+ Sbjct: 61 KKGYSGTMAMAKQEPLSYTTGTGENNKDVEGRIQTLEYD----NFYLINSYFPNSQH-GL 115 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 T+ D KI R + +L+ ++P+I GD+N+ + D P E +A FT+E R Sbjct: 116 TRLDYKI-QFNREILEYMDKLKAKKPVIITGDFNVAHEEIDIARPKGNEKNAGFTIEERD 174 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 S ++ + G+ D R H YS+W Y ++ KN G RID+ ++S + + I Sbjct: 175 SMTEILSHGYVDTYRYFHKEPGHYSWWSYRFNAREKNIGWRIDYFLVSDNFIGKVEDSLI 234 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 G SDH P+ + L Sbjct: 235 LENVTG----SDHAPLELILK 251 >gi|149692696|ref|XP_001505181.1| PREDICTED: similar to APEX nuclease [Equus caballus] Length = 318 Score = 172 bits (435), Expect = 6e-41, Method: Composition-based stats. Identities = 73/269 (27%), Positives = 125/269 (46%), Gaps = 17/269 (6%) Query: 2 SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN----YH 56 + + + +WNV+ +RA I W+KE PDI+CLQETK + P E + Y Sbjct: 60 ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQYW 119 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 ++ Y+GV +LS+ P+++ + ++ D + R I A F + + G Sbjct: 120 SAPSDKEGYSGVGLLSRQCPLKVSYGIGEEEHDQEGRVIVAEF---DAFVLVTAYVPNAG 176 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + +Y + R + L +PL+ GD N+ + D NP + +A FT Sbjct: 177 RGLVRLEYRQRWDEAFRKF---LKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 233 Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E + + LQ + D+ R + + Y+FW Y ++ SKN G R+D+ +LS Sbjct: 234 PQERQGFGELLQAVPLADSFRHLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLP 293 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 L ++I +K G SDH P+ + L + Sbjct: 294 ALCDSKIRSKALG----SDHCPITLYLAL 318 >gi|255513574|gb|EET89840.1| exodeoxyribonuclease III Xth [Candidatus Micrarchaeum acidiphilum ARMAN-2] Length = 249 Score = 172 bits (435), Expect = 6e-41, Method: Composition-based stats. Identities = 61/259 (23%), Positives = 114/259 (44%), Gaps = 13/259 (5%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 +++ +WNVN IRA ++ ++ PDII QE K +++ P + L+SL Y + Sbjct: 3 ISLISWNVNGIRAAEKSVVGLLESEKPDIIAFQEIKAGEESIP-KGLKSLGYAMYVNSAA 61 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 + + I +D + + + +E + + ++ + Sbjct: 62 RKGYSGTMVMTKIKPISYSTEFEDDEGRVQRLEFDDYYF-----VNAYFPNSRRDLSRLE 116 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K R RLE ++P++ GD+N+ + D P +A FT E R+ Sbjct: 117 FKIKF---DRDFEKYIGRLEAKKPVLVCGDFNVAHKDIDIARPAENRGNAGFTDEEREWM 173 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + G D R + Y++W Y++ + +N G RID+ + S + S + +A I + Sbjct: 174 TEFLGGGRLDTFRIFNKGAEHYTWWAYFSHARDRNIGWRIDYFVASKQMRSRIVNAGILS 233 Query: 244 KPRGWTKPSDHTPVIVSLD 262 + RG SDH P+ V+L Sbjct: 234 EIRG----SDHAPIYVTLK 248 >gi|284031341|ref|YP_003381272.1| exodeoxyribonuclease III Xth [Kribbella flavida DSM 17836] gi|283810634|gb|ADB32473.1| exodeoxyribonuclease III Xth [Kribbella flavida DSM 17836] Length = 267 Score = 172 bits (435), Expect = 6e-41, Method: Composition-based stats. Identities = 63/267 (23%), Positives = 113/267 (42%), Gaps = 6/267 (2%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL---NYHIE 58 ++ VAT NVN +RA +A W++ +P+++ LQE + D+ + Sbjct: 1 MLKVATVNVNGVRAAYRRGMAPWLERTDPELLLLQEVRATDEVLRDHLGGDWQLVHAEPV 60 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-TQTLRIGNLYLPHGN 117 T G K GVA+ S+ T + + R++EA ++ TL + Y+ G Sbjct: 61 TEGSKGRAGVAVASRRPIKAERTDIGPERFTGCGRWVEADVVLDDGSTLTAVSTYVFTGE 120 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 T + ++K +++ ++ ++ GD NI + D + F Sbjct: 121 FETPPRQEEKYAFLDAITVRLTELRADGRHVLMCGDLNIAHREVDLKAWKANRKKSGFLP 180 Query: 178 EVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 E R +L G+ D R D YS+W + ++ + G RID+ + SPE + Sbjct: 181 EERAWLDRLFEAGWVDLGRRFGGDGPGPYSWWSWRGKAFDNDAGWRIDYQIASPELAAAA 240 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263 +D P + SDH PV+ + +I Sbjct: 241 TGCTVDRAPTYAERWSDHAPVVATYEI 267 >gi|327333158|gb|EGE74885.1| exodeoxyribonuclease III [Propionibacterium acnes HL097PA1] Length = 297 Score = 171 bits (434), Expect = 7e-41, Method: Composition-based stats. Identities = 62/297 (20%), Positives = 106/297 (35%), Gaps = 37/297 (12%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +A++N+N IRA + + W++ + D+I LQE + + P + Sbjct: 1 MRIASFNINGIRAALKRGFSEWMEARDCDVIGLQEVRCRPADLPEGAFGDRHVSWAPGSL 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDL------------------------DVQARFIEAT 98 NGVA+L++ P E+ + + Sbjct: 61 AGRNGVALLTRTAPAEVRSWGTHLVMAPGQAPTPAQALTGNTDGLPTELLPFADEGRYIE 120 Query: 99 FTINTQTLRIGNLYLPHGNPITS----------TKYDDKISWIKRFLRFASQRLELEEPL 148 + L + LYLP G K + +R + Sbjct: 121 VDLADTPLTVACLYLPKGATPDPANEKTIAKQDRKMAFLTGFRDHLVRRRQECTAQGRHF 180 Query: 149 IFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL--QNMGFTDAIRATHDTHHLYS 206 + GD+NI + D N + + F E RQ F + + DT+ YS Sbjct: 181 LVMGDFNIAHENADLKNWKANQRNEGFLPEERQWFDTILSPDTLIDVVRAQHPDTNGPYS 240 Query: 207 FWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +W + ++ + G RID+ + SPE S +A ID P + SDH V+V D+ Sbjct: 241 WWSWRGKAFVNDAGWRIDYHLASPELASKAITAEIDRDPSYSERTSDHAAVVVDYDL 297 >gi|310817228|ref|YP_003965192.1| exodeoxyribonuclease III, putative [Ketogulonicigenium vulgare Y25] gi|308755963|gb|ADO43892.1| exodeoxyribonuclease III, putative [Ketogulonicigenium vulgare Y25] Length = 262 Score = 171 bits (434), Expect = 7e-41, Method: Composition-based stats. Identities = 83/266 (31%), Positives = 121/266 (45%), Gaps = 10/266 (3%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCG 61 T+ATWN+NS+R R +A ++E PD++CLQE K+ + P E ++L Y ++ G Sbjct: 2 TFTLATWNINSVRLRAELVARLLREELPDVLCLQECKSPVELIPTEIFRALGYPYMIARG 61 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 QK YNGVAILS+ E+ G + I N Y+P G I Sbjct: 62 QKGYNGVAILSRLPMREV-----GAHDFADLGHARHIAGQLDNGVTIHNFYVPAGGDIPD 116 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL-E 178 + + K +L E+P GD NI P+ D +N T E Sbjct: 117 REQNIKFGQKLDYLTQMRDHFHGEKPQKAILVGDLNIAPREDDVWNHKALLKIVSHTPIE 176 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLH 237 V + + + D RA LYS+W Y + W +KG R+DHI + + + H Sbjct: 177 VDHLGAAMDSGDWVDITRANIPEGRLYSWWSYRSPDWDAADKGRRLDHIWATRDIAAAGH 236 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263 S+R+ RGW PSDH PV + D+ Sbjct: 237 SSRVLRPARGWEGPSDHAPVFATFDL 262 >gi|323524445|ref|YP_004226598.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1001] gi|323381447|gb|ADX53538.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1001] Length = 259 Score = 171 bits (434), Expect = 7e-41, Method: Composition-based stats. Identities = 63/264 (23%), Positives = 112/264 (42%), Gaps = 14/264 (5%) Query: 3 VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59 ++ V T N+N IR A W E N D++C+QE K + E + ++ + + Sbjct: 1 MLRVITANLNGIRSAAKKGFFDWFGEQNADVLCVQEIKCSQDDMTPEFMAPHDFTGYFQH 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G + ++++P E+V ++ D + R++E F L + ++Y+P G+ Sbjct: 61 AVKKGYSGAGVYTRHEPDEVVIGFGSEEFDPEGRYVELRFG----KLSVVSVYVPSGSSG 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + L E +I GD NI+ + D N + ++ E Sbjct: 117 EERQQA--KYRFMDEFMPHLAELAREREVIVCGDVNIVHKEIDIKNWKSNQKNSGCLPEE 174 Query: 180 RQSFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R KL + G+ D R Y++W +++KN G RID+ + +P S Sbjct: 175 RAWLTKLFDEVGYVDVFRTLDQRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGIASTAKR 234 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 + K SDH P+ V D Sbjct: 235 TEVFRDI----KFSDHAPLTVDYD 254 >gi|223278400|ref|NP_788782.2| DNA-(apurinic or apyrimidinic site) lyase [Bos taurus] gi|113912167|gb|AAI22611.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Bos taurus] gi|296483354|gb|DAA25469.1| DNA-(apurinic or apyrimidinic site) lyase [Bos taurus] Length = 318 Score = 171 bits (434), Expect = 7e-41, Method: Composition-based stats. Identities = 73/269 (27%), Positives = 126/269 (46%), Gaps = 17/269 (6%) Query: 2 SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN----YH 56 + + + +WNV+ +RA I W+KE PDI+CLQETK + P E + Y Sbjct: 60 ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPVELQELSGLSHQYW 119 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 ++ Y+GV +LS+ P+++ + ++ D + R I A + + + G Sbjct: 120 SAPSDKEGYSGVGLLSRQCPLKVSYGIGEEEHDQEGRVIVAEY---DAFVLVTAYVPNAG 176 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + +Y + R + L +PL+ GD N+ + D NP + +A FT Sbjct: 177 RGLVRLEYRQRWDEAFRKF---LKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 233 Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E + + LQ + TD+ R + + Y+FW Y ++ SKN G R+D+ +LS Sbjct: 234 PQERQGFGELLQAVPLTDSFRHLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSQSLLP 293 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 L ++I +K G SDH P+ + L + Sbjct: 294 ALCDSKIRSKALG----SDHCPITLYLAL 318 >gi|328782712|ref|XP_623551.2| PREDICTED: recombination repair protein 1 [Apis mellifera] Length = 346 Score = 171 bits (434), Expect = 7e-41, Method: Composition-based stats. Identities = 75/263 (28%), Positives = 125/263 (47%), Gaps = 13/263 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFET-LQSLNYHIETCG 61 + +++WNV+ IRA I N +I + + DI+ LQETK + P E L +Y+ Sbjct: 94 LKISSWNVSGIRAVIKKNGIKYIAKEDADIVALQETKCDSNKLPEEIKLNGYHYYFLESK 153 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 + Y GVA+ +K +PI++ L + D + R I A + + N+Y+P+ Sbjct: 154 KSGYCGVALFTKEKPIDVKYGLNNSEFDNEGRLITAEYL----NFYLINVYVPNAGQKLV 209 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 T + + L+ ++P+I GD N+ + D NP +A FT+E R Sbjct: 210 TLPKRLKWN--EIFKTYVRNLDEKKPVIICGDMNVAHKEIDLRNPKTNIKNAGFTIEERD 267 Query: 182 SFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 GF D RA + Y+FW Y+A++ SKN G R+D+ ++S + Sbjct: 268 GMTDFLATGFVDTFRALYPDKTDAYTFWSYFANARSKNIGWRLDYFLVSERIKDNVCDNV 327 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263 I K G SDH P+++ ++I Sbjct: 328 IRDKVYG----SDHCPIVLYINI 346 >gi|327278210|ref|XP_003223855.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like isoform 2 [Anolis carolinensis] Length = 306 Score = 171 bits (434), Expect = 7e-41, Method: Composition-based stats. Identities = 78/263 (29%), Positives = 123/263 (46%), Gaps = 16/263 (6%) Query: 3 VVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQ----SLNYHI 57 + V +WNV+ IRA + W+ E NPDI+CLQETK +K P + Y Sbjct: 50 TLKVTSWNVDGIRAWVKKKGVEWVSEENPDILCLQETKCAEKQLPADIRDLAEYPHKYWA 109 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 + ++ Y+GVA+LSK +P+E+ + ++ D + R I A F + + G Sbjct: 110 CSEDKEGYSGVALLSKVKPLEVKYGIGEEEHDKEGRVITAEFP---SYFLVTSYVPNAGR 166 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + +Y R + L +PLI GD N+ + D NP + +A FT Sbjct: 167 GLVRLEYRQSWDVAFRSY---LKGLAARKPLILCGDLNVAHEEIDLKNPKGNKKNAGFTP 223 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 E R F KL GF D R + + Y+FW Y ++ SKN G R+D+ ++S + + Sbjct: 224 EERAGFTKLLEEGFVDTFRHLYPDTAYAYTFWTYMMNARSKNVGWRLDYFVVSKDLQESI 283 Query: 237 HSARIDTKPRGWTKPSDHTPVIV 259 ++I R SDH P+ + Sbjct: 284 CDSKI----RSTALGSDHCPITL 302 >gi|261749295|ref|YP_003256980.1| exodeoxyribonuclease III [Blattabacterium sp. (Periplaneta americana) str. BPLAN] gi|261497387|gb|ACX83837.1| exodeoxyribonuclease III [Blattabacterium sp. (Periplaneta americana) str. BPLAN] Length = 256 Score = 171 bits (434), Expect = 7e-41, Method: Composition-based stats. Identities = 71/264 (26%), Positives = 125/264 (47%), Gaps = 13/264 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + ++N+N IR+ I L WIK PD++CLQE K + L Y+ Sbjct: 1 MKIISYNINGIRSGINKGLLHWIKSYQPDVLCLQEIKASKEQIKTSLFDHLGYYHYWFPS 60 Query: 62 --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GV IL K +P I + + +D + R + + + +LY+P G + Sbjct: 61 TKRKGYSGVGILCKEKPHHIEYGIGIESIDTEGRVLRIDLK----KISVISLYIPSGKHL 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + + K +++ F + + + + L+ GDYNI D ++PI + F E Sbjct: 117 KNR-LNFKFYFMENFFSYIKKIQKKLKDLVICGDYNICHHEIDIHDPIRNRKISGFLPEE 175 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R+ N+GF D+ R + YS+W YY+++ NKG RID+ M+S ++ A Sbjct: 176 RKWMSNFLNLGFIDSFRNYVKEANHYSWWSYYSNAKKNNKGWRIDYAMVSRSLKKKMNKA 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 + + SDH P ++ ++I Sbjct: 236 YLLPEIPY----SDHCPTVLEIEI 255 >gi|254292391|ref|YP_003058414.1| exodeoxyribonuclease III Xth [Hirschia baltica ATCC 49814] gi|254040922|gb|ACT57717.1| exodeoxyribonuclease III Xth [Hirschia baltica ATCC 49814] Length = 269 Score = 171 bits (434), Expect = 8e-41, Method: Composition-based stats. Identities = 78/268 (29%), Positives = 121/268 (45%), Gaps = 8/268 (2%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIET 59 M+ + + +WN+NS+R R+ +A +I PDI+CLQE K + +P + + ++E Sbjct: 1 MTDLRLTSWNINSVRLRMPRVADFIAREKPDILCLQEIKCREAEYPLKAFEEAGLPYVEI 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 GQK +GVAI S+Y + T + + L + +P Sbjct: 61 AGQKGMHGVAIGSRYPLERLET-PDFCIREEARAISVRVAGVEVHNLYVPAG-GDEPDPT 118 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K+ K+ ++ R + S R +PLI GD N+ P+ HD ++ T Sbjct: 119 INDKFAHKLEFLARMEKTYSARSNDSQPLIVVGDINVAPREHDVWSHKQLLKVVSHTPIE 178 Query: 180 RQSFQK--LQNMGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLL 236 Q+ + + A D LYS+W Y A W K N+G R+DHI + AT L Sbjct: 179 TQAVDRILKEGGFADIARVKHEDKEKLYSWWSYRAKDWEKSNRGRRLDHIWANRAATPLT 238 Query: 237 --HSARIDTKPRGWTKPSDHTPVIVSLD 262 S I RG KPSDH PV ++L Sbjct: 239 DPASYEIHKDDRGGEKPSDHAPVTINLK 266 >gi|319954545|ref|YP_004165812.1| exodeoxyribonuclease iii xth [Cellulophaga algicola DSM 14237] gi|319423205|gb|ADV50314.1| exodeoxyribonuclease III Xth [Cellulophaga algicola DSM 14237] Length = 254 Score = 171 bits (434), Expect = 8e-41, Method: Composition-based stats. Identities = 71/264 (26%), Positives = 113/264 (42%), Gaps = 14/264 (5%) Query: 4 VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFP--FETLQSLNYHIETC 60 + + +WNVN IRA + +K PDI+CLQETK +D E+L + + + + Sbjct: 1 MHIVSWNVNGIRAAVKKDFFEAVKTMAPDILCLQETKAQDSEVAKALESLSNFSLNSNSA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+G AILSK PI ++ + D + R + + + G + Sbjct: 61 DKKGYSGTAILSKQAPISATPNMGIEVHDTEGRILCTEY---DSFYLVNVYVPNSGQKLD 117 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND-ACFTLEV 179 +Y + + + LE ++P+I GD+N+ Q D N N A +T Sbjct: 118 RLEYRQQW---DKDFLAYLKNLEKKKPVIACGDFNVAHQAIDLKNDKANYNKTAGYTQIE 174 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 F D+ RA H Y+FW Y S +N G RID+ ++S + Sbjct: 175 IDGMDNFIANDFVDSFRALHPDEVAYTFWSYRFKSRERNTGWRIDYFLVSKAIADKIKKV 234 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 I G SDH P+ ++L I Sbjct: 235 TIYADIMG----SDHCPIGITLSI 254 >gi|45657327|ref|YP_001413.1| exodeoxyribonuclease [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|294828126|ref|NP_712697.2| exodeoxyribonuclease [Leptospira interrogans serovar Lai str. 56601] gi|45600565|gb|AAS70050.1| exodeoxyribonuclease [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|293385973|gb|AAN49715.2| exodeoxyribonuclease [Leptospira interrogans serovar Lai str. 56601] Length = 254 Score = 171 bits (434), Expect = 8e-41, Method: Composition-based stats. Identities = 66/263 (25%), Positives = 109/263 (41%), Gaps = 12/263 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETC 60 + + N N IR+ + LA +I+ PD IC QETK P + Y + Sbjct: 1 MKFISLNCNGIRSSLEKGLADYIRNTKPDFICFQETKANQDQVPPSLWEEGGYTPVFHSA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GVA+L K P +I + D + R I + Sbjct: 61 EKKGYSGVAVLYKKPPEKITIGIGDPFFDKEGRSIYLEYPNFALW-----NLYFPSGTTG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K+ ++ F + +S+R + + +I GD NI P D ++P + F E R Sbjct: 116 DIRQAAKMKFLDLFQKESSKRRKKQPNIIVCGDVNIAHTPQDIHDPKGNAKSSGFLPEER 175 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + + N G+ D R + YS+W + A + +KNKG RID+ ++ E + S Sbjct: 176 EWLSEFLNKGWVDTFRYLYPDKQEYSWWTFRAGARAKNKGWRIDYFFVTEELKKNVKSHS 235 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263 I SDH P+ + + Sbjct: 236 IFRD----KPFSDHAPLEFEIKL 254 >gi|260062521|ref|YP_003195601.1| exonuclease III [Robiginitalea biformata HTCC2501] gi|88784086|gb|EAR15256.1| exonuclease III [Robiginitalea biformata HTCC2501] Length = 254 Score = 171 bits (434), Expect = 8e-41, Method: Composition-based stats. Identities = 65/263 (24%), Positives = 104/263 (39%), Gaps = 14/263 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60 + + +WNVN IRA A I++ +PD++CLQE K + + Q Y H+ Sbjct: 1 MKIISWNVNGIRAISGKGFAGHIEDLDPDVLCLQEIKADTEIVEEIAGQLPGYAVHVHPA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+G A+L K + D L + R + A + G + Sbjct: 61 EKKGYSGTALLLKNAEAGVDRGPETDLLQGEGRILRADLGDFN---LVNTYVPNSGANLK 117 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND-ACFTLEV 179 + ++ L +PL+ GD N+ +P D N N A +T Sbjct: 118 RLDFREEW---DAAFLEYLNGLRDHKPLVLCGDLNVAHRPIDLKNDKANYNKTAGYTQRE 174 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 +L G D R H Y++W Y + +N G R+D+ ++SPE + Sbjct: 175 IDGMDRLHQSGLIDIFRKRHPDEVAYTYWSYRFGARKRNVGWRLDYFLISPELEGRVAGT 234 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 I G SDH P+ + LD Sbjct: 235 PIYHNIEG----SDHCPIGLELD 253 >gi|297587792|ref|ZP_06946436.1| exodeoxyribonuclease III [Finegoldia magna ATCC 53516] gi|302380031|ref|ZP_07268510.1| exodeoxyribonuclease III [Finegoldia magna ACS-171-V-Col3] gi|297574481|gb|EFH93201.1| exodeoxyribonuclease III [Finegoldia magna ATCC 53516] gi|302312257|gb|EFK94259.1| exodeoxyribonuclease III [Finegoldia magna ACS-171-V-Col3] Length = 253 Score = 171 bits (434), Expect = 8e-41, Method: Composition-based stats. Identities = 64/262 (24%), Positives = 104/262 (39%), Gaps = 13/262 (4%) Query: 4 VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFET-LQSLNYHIETCG 61 + + +WNVN RA N DI CLQE K ++ E ++ + + + Sbjct: 1 MKLISWNVNGYRAVWKKGFKEAFDSLNADIFCLQEIKMKENQMTDEMEIEGYHRYSYSAN 60 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 + Y+G + +K +PI + + D+ D + R I + + + Sbjct: 61 KAGYSGTLVYTKTEPIGVSFGIGIDEHDTEGRVITCEYE---DFFLVNVYTPNSKQKLER 117 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 Y + L +P+I GD N+ D NP A FT E R Sbjct: 118 LDYR---MVWEDEFHNYLNILRDRKPVIVCGDLNVAHNEIDLKNPQSNRRSAGFTDEERN 174 Query: 182 SFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 L N G+ D R + YS+W Y+A + +N G RID+ ++S + L A+ Sbjct: 175 KMSLLLNDGYIDTFRYFYPDKTDEYSYWSYFAKARERNAGWRIDYFIVSDDLKDNLVDAK 234 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I G SDH PV + ++ Sbjct: 235 IHQSIMG----SDHCPVELEIN 252 >gi|311900422|dbj|BAJ32830.1| putative exodeoxyribonuclease [Kitasatospora setae KM-6054] Length = 272 Score = 171 bits (434), Expect = 8e-41, Method: Composition-based stats. Identities = 60/264 (22%), Positives = 96/264 (36%), Gaps = 7/264 (2%) Query: 6 VATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ-- 62 V T NVN IRA WI +++CLQE + E F + +H Sbjct: 5 VTTANVNGIRAAAKKGFLEWIDATESEVVCLQEVRAETDQFADVLARLDGWHAVWAPAAA 64 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K GVA+LS+ P + DV R+ E T + G Sbjct: 65 KGRAGVAVLSRRAPEATRIGFGSAEFDVSGRYAELDLPGLTVA-SLYLPSGEVGTDRQDE 123 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K ++ ++ ++ GD+NI + D N + A F E R Sbjct: 124 KERFMAEFLVHLGELRARAAADGREVLVCGDWNIAHREADLRNWKANQKKAGFLPEERAW 183 Query: 183 FQKLQNMGFTDAIRATHDT---HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 ++ + + H YS+W Y ++ + G RID+ M +P + +A Sbjct: 184 LSRVLDEHGYVDVLRQHHADVAEGPYSWWSYRGRAFDNDAGWRIDYQMATPGLAARCTAA 243 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 R++ + SDH PV D+ Sbjct: 244 RVERAATHAERWSDHAPVTAVFDL 267 >gi|149914506|ref|ZP_01903036.1| exodeoxyribonuclease III [Roseobacter sp. AzwK-3b] gi|149811299|gb|EDM71134.1| exodeoxyribonuclease III [Roseobacter sp. AzwK-3b] Length = 262 Score = 171 bits (434), Expect = 8e-41, Method: Composition-based stats. Identities = 84/263 (31%), Positives = 117/263 (44%), Gaps = 10/263 (3%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQK 63 T+ATWN+NS+R R +A ++E PDI+CLQE K+ P E+ +L Y ++ GQK Sbjct: 4 TLATWNINSVRLREGLVARLLREEAPDILCLQECKSPVDKIPAESFAALGYPYMVARGQK 63 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 YNGVAILSK GD + I N Y+P G I + Sbjct: 64 GYNGVAILSKLPIE-----DAGDMDFAALGHARHVAGRLENGVVIHNFYVPAGGDIPDRE 118 Query: 124 YDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180 ++K +L P GD NI P+ D ++ T EV Sbjct: 119 KNEKFGQKLDYLTEMRDWFRDGRPQKAILVGDLNIAPREDDVWSHKQLLKVVSHTPIEVA 178 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHSA 239 + G+ D R+ LYS+W Y A W +KG R+DH+ S + HS+ Sbjct: 179 HLGDVQEAGGWVDVTRSDIPEGQLYSWWSYRAKDWDAADKGRRLDHVWASADLRHAFHSS 238 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 R+ RGW +PSDH PV + D Sbjct: 239 RVLRAARGWEQPSDHAPVFATFD 261 >gi|163745437|ref|ZP_02152797.1| exodeoxyribonuclease III [Oceanibulbus indolifex HEL-45] gi|161382255|gb|EDQ06664.1| exodeoxyribonuclease III [Oceanibulbus indolifex HEL-45] Length = 262 Score = 171 bits (433), Expect = 9e-41, Method: Composition-based stats. Identities = 78/263 (29%), Positives = 112/263 (42%), Gaps = 10/263 (3%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64 +ATWN+NS+R R + + E+ PD++CLQE K+ P E Q+ Y H+ GQK Sbjct: 5 LATWNINSVRLREPLVLKLLAEHGPDVLCLQECKSPVDKIPVEAFQAAGYTHMVARGQKG 64 Query: 65 YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124 YNGVAILSK ++ + + + P G + Sbjct: 65 YNGVAILSKLPLLDAGDQDFAMLGHARHVAAKLENGTTIHNFYV-----PAGGDKPDREI 119 Query: 125 DDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL-EVRQ 181 ++K +L ++P GD NI P+ D ++ T EV Sbjct: 120 NEKFGQKLDYLSEMRDWFHSDKPEKSILVGDLNIAPREDDVWDHKKLLKIVSHTPVEVEA 179 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHSAR 240 + D R T +LYS+W Y A W +KG R+DHI + + HS+ Sbjct: 180 LGAVQDAGNWVDITRQDVPTGNLYSWWSYRAADWDAADKGRRLDHIWATADIAQAGHSSH 239 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263 I RGW KPSDH PV S D+ Sbjct: 240 IVRDARGWEKPSDHAPVFASFDL 262 >gi|6980804|pdb|1DE8|B Chain B, Human ApurinicAPYRIMIDINIC ENDONUCLEASE-1 (Ape1) Bound To Abasic Dna gi|6980805|pdb|1DE8|A Chain A, Human ApurinicAPYRIMIDINIC ENDONUCLEASE-1 (Ape1) Bound To Abasic Dna gi|6980812|pdb|1DE9|A Chain A, Human Ape1 Endonuclease With Bound Abasic Dna And Mn2+ Ion gi|6980813|pdb|1DE9|B Chain B, Human Ape1 Endonuclease With Bound Abasic Dna And Mn2+ Ion Length = 276 Score = 171 bits (433), Expect = 9e-41, Method: Composition-based stats. Identities = 73/269 (27%), Positives = 125/269 (46%), Gaps = 17/269 (6%) Query: 2 SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN----YH 56 + + + +WNV+ +RA I W+KE PDI+CLQETK + P E + Y Sbjct: 18 ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQYW 77 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 ++ Y+GV +LS+ P+++ + ++ D + R I A F + + G Sbjct: 78 SAPSDKEGYSGVGLLSRQCPLKVSYGIGDEEHDQEGRVIVAEF---DSFVLVTAYVPNAG 134 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + +Y + R + L +PL+ GD N+ + D NP + +A FT Sbjct: 135 RGLVRLEYRQRWDEAFRKF---LKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 191 Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E + + LQ + D+ R + + Y+FW Y ++ SKN G R+D+ +LS Sbjct: 192 PQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLP 251 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 L ++I +K G SDH P+ + L + Sbjct: 252 ALCDSKIRSKALG----SDHCPITLYLAL 276 >gi|254000228|ref|YP_003052291.1| exodeoxyribonuclease III Xth [Methylovorus sp. SIP3-4] gi|253986907|gb|ACT51764.1| exodeoxyribonuclease III Xth [Methylovorus sp. SIP3-4] Length = 260 Score = 171 bits (433), Expect = 9e-41, Method: Composition-based stats. Identities = 72/267 (26%), Positives = 121/267 (45%), Gaps = 15/267 (5%) Query: 1 MSVVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HI 57 MS+ + + N+N IR A W+++ N DI+C+QE K + + E L Y + Sbjct: 1 MSLYRIISANLNGIRSAANKGFYPWLQQQNADIVCMQELKAQLADMTPEMLNPEGYFGYF 60 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 +K Y+GV I ++ QP ++ L D+D + R++E + L + +LYLP G+ Sbjct: 61 HYAEKKGYSGVGIYTRVQPDAVIVGLGIADIDAEGRYLE----LQFGNLSVVSLYLPSGS 116 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + K S + RFL ++ GD+NI + D N + ++ F Sbjct: 117 -SGEERQAFKFSVMTRFLVHLEALRAAGRDVVICGDWNIAHKEADLKNWKGNKKNSGFLP 175 Query: 178 EVRQSFQKLQNM-GFTDAIRATHDT--HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R L + G+ D R H Y++W +W+KN G RID+ + +P + Sbjct: 176 EERAWLTDLFDRVGWVDVYRVLHPDTTDECYTWWSNRGQAWAKNVGWRIDYQIATPYFAA 235 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261 +A I + SDH P+I+ Sbjct: 236 KAVAASIYK----LERFSDHAPLIIDY 258 >gi|85703387|ref|ZP_01034491.1| exodeoxyribonuclease III, putative [Roseovarius sp. 217] gi|85672315|gb|EAQ27172.1| exodeoxyribonuclease III, putative [Roseovarius sp. 217] Length = 262 Score = 171 bits (433), Expect = 9e-41, Method: Composition-based stats. Identities = 86/264 (32%), Positives = 116/264 (43%), Gaps = 10/264 (3%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQK 63 T+ATWN+NS+R R +A ++E PDI+CLQE K+ P E +L Y H+ GQK Sbjct: 4 TLATWNINSVRLREGLVARLMQEEMPDILCLQECKSPVDKMPLEAFAALGYRHVVARGQK 63 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 YNGVAILSK E+ + + + P G I Sbjct: 64 GYNGVAILSKLPMAEVGAMDFAGLGHARHIAGQLENGTVIHNFYV-----PAGGDIPDRA 118 Query: 124 YDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180 +DK +L P GD NI P+ D +N T EV Sbjct: 119 VNDKFGQKLDYLTEMRDWFRDSRPEKSILVGDLNIAPREDDVWNHKQLLKIVSHTPVEVE 178 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHSA 239 ++ G+ D RA LYS+W Y A W NKG R+DH+ S + + HS+ Sbjct: 179 HLGDVMEAGGWQDVTRADIPEGQLYSWWSYRASDWDAANKGRRLDHVWASGDIRAAAHSS 238 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 RI RGW +PSDH PV + D+ Sbjct: 239 RILRGARGWDQPSDHAPVFATFDL 262 >gi|294495018|ref|YP_003541511.1| exodeoxyribonuclease III [Methanohalophilus mahii DSM 5219] gi|292666017|gb|ADE35866.1| exodeoxyribonuclease III [Methanohalophilus mahii DSM 5219] Length = 244 Score = 171 bits (433), Expect = 9e-41, Method: Composition-based stats. Identities = 67/251 (26%), Positives = 107/251 (42%), Gaps = 12/251 (4%) Query: 15 RA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC--GQKSYNGVAIL 71 RA W+ +PDI+CLQETK P + Y+ +K Y+GVA+ Sbjct: 2 RAVAKKGFLEWLTSESPDILCLQETKARPSQLPPNIRRIDGYYSYFSAAERKGYSGVALY 61 Query: 72 SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWI 131 SK QP E+ + D + R + A F + N+Y P+GN K+ + Sbjct: 62 SKVQPQEVRYGFGINRFDHEGRILIAFFD----HFVLFNIYFPNGNSSDER-LQYKMDFY 116 Query: 132 KRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191 FL + + + ++ GD N + D P E + F R+ K + GF Sbjct: 117 GAFLEYTQELRQEGYSVVVCGDLNTAHKAIDIARPKQNEKRSGFLPVEREWIDKFLSHGF 176 Query: 192 TDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP 251 D R ++ Y++WD + +N G R+D+ +S + + A I ++ G Sbjct: 177 LDTFRLFNEEEGNYTWWDLKTRARDRNVGWRLDYFFVSADLKQGVKEAFILSEVTG---- 232 Query: 252 SDHTPVIVSLD 262 SDH PV + LD Sbjct: 233 SDHCPVGLELD 243 >gi|317154705|ref|YP_004122753.1| exodeoxyribonuclease III [Desulfovibrio aespoeensis Aspo-2] gi|316944956|gb|ADU64007.1| exodeoxyribonuclease III [Desulfovibrio aespoeensis Aspo-2] Length = 283 Score = 171 bits (433), Expect = 9e-41, Method: Composition-based stats. Identities = 66/262 (25%), Positives = 104/262 (39%), Gaps = 15/262 (5%) Query: 6 VATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSL----NYHIETC 60 + +WNVN RA I N W+ D++ LQETK E + +Y + Sbjct: 30 IYSWNVNGYRAVIKKNFRDWLDGCGGDVVMLQETKAHPDQLAPEEREPDSYANHYWNWSR 89 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GVA + +P+ + LP + R + + + N+Y P+G Sbjct: 90 KKKGYSGVACFANPEPLAVTIGLPDARFQGEGRVLHLEYP----DFHLFNIYFPNGQMGD 145 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 +Q L +P++ GD+N D NP + F E R Sbjct: 146 DRL--AFKMGFYDAFLDHAQALRKTKPIVVGGDFNTAHCEIDLKNPKANAERSGFLPEER 203 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + G+ D R D YS+W Y ++ N G RID+ +S E + A Sbjct: 204 AWIDRFIAHGYVDTFRLFEDGPGHYSWWSYRFNARQNNAGWRIDYFFVSEELRPKVVRAW 263 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I+ + G SDH P+ V +D Sbjct: 264 IEPEVPG----SDHCPIGVEID 281 >gi|297694584|ref|XP_002824554.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like isoform 1 [Pongo abelii] gi|297694586|ref|XP_002824555.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like isoform 2 [Pongo abelii] gi|146286035|sp|A2T7I6|APEX1_PONPY RecName: Full=DNA-(apurinic or apyrimidinic site) lyase; AltName: Full=APEX nuclease; Short=APEN; AltName: Full=Apurinic-apyrimidinic endonuclease 1; Short=AP endonuclease 1; AltName: Full=REF-1; AltName: Full=Redox factor-1; Contains: RecName: Full=DNA-(apurinic or apyrimidinic site) lyase, mitochondrial gi|124054149|gb|ABM89264.1| APEX1 [Pongo pygmaeus] Length = 318 Score = 171 bits (433), Expect = 9e-41, Method: Composition-based stats. Identities = 73/269 (27%), Positives = 126/269 (46%), Gaps = 17/269 (6%) Query: 2 SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN----YH 56 + + + +WNV+ +RA I W+KE PDI+CLQETK + P E + Y Sbjct: 60 ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQYW 119 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 ++ Y+GV +LS+ P+++ + ++ D + R I A F + + G Sbjct: 120 SAPSDKEGYSGVGLLSRQCPLKVSYGIGEEEHDQEGRVIVAEF---DSFVLVTAYVPNAG 176 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + +Y + R + L +PL+ GD N+ + D NP + +A FT Sbjct: 177 RGLVRLEYRQRWDEAFRRF---LKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 233 Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E + + LQ + D+ R + + Y+FW Y ++ SKN G R+D+ +LS + Sbjct: 234 PQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLT 293 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 L ++I +K G SDH P+ + L + Sbjct: 294 ALCDSKIRSKALG----SDHCPITLYLAL 318 >gi|15890010|ref|NP_355691.1| exodeoxyribonuclease III [Agrobacterium tumefaciens str. C58] gi|15157983|gb|AAK88476.1| exodeoxyribonuclease III [Agrobacterium tumefaciens str. C58] Length = 267 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 78/263 (29%), Positives = 113/263 (42%), Gaps = 9/263 (3%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64 + TWN+NS+R R+ + ++ PDI+CLQETK + FP + L++L Y H+ GQK Sbjct: 5 ITTWNINSVRLRMPIVEQFLVRYKPDILCLQETKCPNGEFPMKPLKALGYEHVIIHGQKG 64 Query: 65 YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124 Y+GVAI SK E AR I A F + ++ +R+ N Y+P G Sbjct: 65 YHGVAIASKIPLTEDHR--QDYCGIGDARHISAIFQVGSRRVRLHNFYVPAGGDEPDRSI 122 Query: 125 DDKISWIKRFLRFASQRL---ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR- 180 + K F+ I GD NI P +D ++ T Sbjct: 123 NPKFGHKLDFIEEMKALRADGVPGTSSILVGDLNIAPLENDVWSHKQLLKIVSHTPVETE 182 Query: 181 -QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHS 238 + +T +Y++W Y A W N+G R+DHI S + S L Sbjct: 183 GMLDIMKKGNWLDLMRLNVPETEKIYTWWSYRAKDWEAANRGRRLDHIWSSQDLGSSLEK 242 Query: 239 ARIDTKPRGWTKPSDHTPVIVSL 261 I + RGW +PSDH PV Sbjct: 243 IEILREARGWNRPSDHVPVTAHF 265 >gi|301788284|ref|XP_002929556.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like isoform 1 [Ailuropoda melanoleuca] gi|301788286|ref|XP_002929557.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like isoform 2 [Ailuropoda melanoleuca] gi|301788288|ref|XP_002929558.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like isoform 3 [Ailuropoda melanoleuca] gi|281345899|gb|EFB21483.1| hypothetical protein PANDA_019762 [Ailuropoda melanoleuca] Length = 318 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 73/269 (27%), Positives = 125/269 (46%), Gaps = 17/269 (6%) Query: 2 SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN----YH 56 + + + +WNV+ +RA I W+KE PDI+CLQETK + P E + Y Sbjct: 60 ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELSGLSHQYW 119 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 ++ Y+GV +LS+ P+++ + ++ D + R I A F + + G Sbjct: 120 SAPSDKEGYSGVGLLSRQCPLKVSYGIGEEEHDQEGRVIVAEF---DAFVLVTAYVPNAG 176 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + +Y + R + L +PL+ GD N+ + D NP + +A FT Sbjct: 177 RGLVRLEYRQRWDEAFRKF---LKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 233 Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E + + LQ + D+ R + + Y+FW Y ++ SKN G R+D+ +LS Sbjct: 234 PQERQGFGELLQAVPLADSFRHLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLP 293 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 L ++I +K G SDH P+ + L + Sbjct: 294 ALCDSKIRSKALG----SDHCPITLYLAL 318 >gi|148927710|ref|ZP_01811154.1| exodeoxyribonuclease III Xth [candidate division TM7 genomosp. GTL1] gi|147886940|gb|EDK72466.1| exodeoxyribonuclease III Xth [candidate division TM7 genomosp. GTL1] Length = 266 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 78/270 (28%), Positives = 125/270 (46%), Gaps = 18/270 (6%) Query: 4 VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + +WNVN IRA ++ ++KE++PDI+CLQETK E + + + + Sbjct: 1 MKIYSWNVNGIRAVVNKGAFQKFVKEHDPDILCLQETKAERGQAEIDLPHYIE-NWNSAV 59 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDL---------DVQARFIEATFTINTQTLRIGNLY 112 +K Y+G AI SK QP+ I+ P D + + I +Y Sbjct: 60 KKGYSGTAIFSKTQPLSIINGFPEDIIKKYKVEGDVYGDPNKEGRVMAAEFEDFYIVTVY 119 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 P+ + + W FL + Q LE +P+IF GD N+ D P + Sbjct: 120 TPNSKRELTRLTLREKHWDPAFLAYVKQ-LEKTKPVIFCGDLNVAHTEDDLARPDTNHGE 178 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 FT E R+ FQK + GF D R + Y++W ++A++ ++N G RID+ ++S Sbjct: 179 HGFTDEEREGFQKFLDAGFVDTFRMFTPKGNGHYTWWTHWANARARNVGWRIDYFLVSHA 238 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 S + SA+I G SDH P+ + L Sbjct: 239 LKSKVKSAKIHADVMG----SDHCPISIEL 264 >gi|56477309|ref|YP_158898.1| exodeoxyribonuclease III [Aromatoleum aromaticum EbN1] gi|56313352|emb|CAI07997.1| exodeoxyribonuclease III [Aromatoleum aromaticum EbN1] Length = 260 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 68/266 (25%), Positives = 116/266 (43%), Gaps = 15/266 (5%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59 ++ V T N+N +R+ + W+ N D +C+QE K + + Y H Sbjct: 1 MLRVITLNLNGVRSAVGKGFLDWLATQNADAVCVQELKAQAGDLTGAVRTPNGYIGHFHH 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GV + ++ P IV L D+D + RF++ F L + +LYLP G+ Sbjct: 61 AEKKGYSGVGLYARRPPDRIVEGLGIADIDAEGRFLQLDFG----PLSVVSLYLPSGSSS 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K +++RFL + +I GD+NI + D N + ++ F E Sbjct: 117 EERQQV-KFGFMERFLPHLATLRNCGREIIVCGDWNIAHREIDLKNWKSNQKNSGFLPEE 175 Query: 180 RQSFQKLQNMGFT-DAIRATHDTHHL--YSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 R F ++ D R + Y++W +W+KN G R+D+ + +P + Sbjct: 176 RAWFSRVLEEQAWVDVYRRLYPDAGGEGYTWWSNRGQAWAKNVGWRLDYQIATPGIAATA 235 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLD 262 SA + R SDH P+ V D Sbjct: 236 KSAAVYKAER----FSDHAPLAVDYD 257 >gi|283955329|ref|ZP_06372828.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni 414] gi|283793089|gb|EFC31859.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni 414] Length = 252 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 62/262 (23%), Positives = 98/262 (37%), Gaps = 12/262 (4%) Query: 4 VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA N WI + D I QE K + FP + + H+ Sbjct: 1 MKLLSWNVNGLRAICDKNALDWITKEKIDFIGFQEIKAHEDKFPKKIYEYPFKHMYFNSA 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K ++S V D + I + N Sbjct: 61 KRAGYSGVMSLCNFDSEVKKCEFFDDEEGRVLEHRFKNIALFNIYFPN------GQKDEE 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + K+ + FL + + L+ +I GD N + D +P N + F R Sbjct: 115 RLNFKMKFYADFLVYLDKLLKDGFEIIICGDVNTAHKEIDLTHPKANANTSGFLPIERAW 174 Query: 183 FQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 L +GF D R + + YS+W Y + +N G RID+ +S + L +A I Sbjct: 175 IDDLLKLGFIDTFREINGEIKEKYSWWSYRMKARERNVGWRIDYFFISQGLQNRLKNAFI 234 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 G SDH PV + +DI Sbjct: 235 REDIFG----SDHAPVGIEIDI 252 >gi|295675147|ref|YP_003603671.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1002] gi|295434990|gb|ADG14160.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1002] Length = 259 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 62/264 (23%), Positives = 111/264 (42%), Gaps = 14/264 (5%) Query: 3 VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59 ++ V T N+N IR A W E D++C+QE K + E + ++ + + Sbjct: 1 MLRVITANLNGIRSAAKKGFFEWFGEQGADVLCVQEIKCSQDDMTPEFMAPHDFTGYFQH 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G + ++++P E+V ++ D + R++E F L + ++Y+P G+ Sbjct: 61 AVKKGYSGAGVYTRHEPDEVVIGFGSEEFDPEGRYVELRFG----KLSVVSVYVPSGSSG 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + L E +I GD NI+ + D N + ++ E Sbjct: 117 DERQQA--KFRFMDEFMPHLAELAKEREVIVCGDVNIVHKEIDIKNWKSNQKNSGCLPEE 174 Query: 180 RQSFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R KL + G+ D R Y++W +++KN G RID+ + +P S Sbjct: 175 RAWLDKLFDEVGYVDVFRTLDQRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGIASKAKR 234 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 + K SDH P+ V D Sbjct: 235 TDVFRDI----KFSDHAPLTVDYD 254 >gi|222087552|ref|YP_002546089.1| exodeoxyribonuclease III [Agrobacterium radiobacter K84] gi|221725000|gb|ACM28156.1| exodeoxyribonuclease III [Agrobacterium radiobacter K84] Length = 267 Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats. Identities = 78/265 (29%), Positives = 118/265 (44%), Gaps = 9/265 (3%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64 +ATWN+NS+R R+ + ++ ++ PDI+CLQETK ++ FP+ L++L Y HI GQK Sbjct: 5 IATWNINSVRLRMPIVEQFLMQSRPDILCLQETKVPNELFPYAPLRALGYEHIIIHGQKG 64 Query: 65 YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124 Y+GVAI S++ E + D + + +R+ N Y+P G Sbjct: 65 YHGVAIASRFPLTEDHRQDYCNVGDSRHISAIFERG--GRRIRVHNFYVPAGGDEPDRTI 122 Query: 125 DDKISWIKRFLRFASQRL---ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + K F+ E I GD NI P HD ++ T Sbjct: 123 NPKFGHKLDFIEEMKHLHANAEQNTSAILVGDLNIAPLEHDVWSHKQLLKIVSHTPVETD 182 Query: 182 SFQKLQNMGFTDAIRATH--DTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHS 238 ++ G + H LY++W Y A W ++G R+DHI S + LL Sbjct: 183 GLLEVMKRGAWLDLMRQHVPANEKLYTWWSYRAKDWEVADRGRRLDHIWSSSDLGPLLQR 242 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263 I RGW +PSDH PV ++ Sbjct: 243 IDILKAARGWDRPSDHVPVTAHFNL 267 >gi|57168378|ref|ZP_00367512.1| exodeoxyribonuclease III [Campylobacter coli RM2228] gi|305432793|ref|ZP_07401952.1| exodeoxyribonuclease III [Campylobacter coli JV20] gi|57020186|gb|EAL56860.1| exodeoxyribonuclease III [Campylobacter coli RM2228] gi|304444190|gb|EFM36844.1| exodeoxyribonuclease III [Campylobacter coli JV20] Length = 252 Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats. Identities = 64/262 (24%), Positives = 99/262 (37%), Gaps = 12/262 (4%) Query: 4 VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA N WI + N D I QE K + FP + + H+ + Sbjct: 1 MKLLSWNVNGLRAICDKNALDWIIKENIDFIGFQEIKAHEDKFPKKIYEYPFKHMYSNSA 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K ++S V D + I + N Sbjct: 61 KRAGYSGVMSLCNFDSEVKKCEFFDDEEGRVLEHRFKNIALFNIYFPN------GQKDEE 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + K+ + +FL + + L+ +I GD N + D +P N + F R Sbjct: 115 RLSFKMKFYAKFLVYLEKLLKDGFEIIICGDVNTAHKEIDLTHPKANANTSGFLPIERAW 174 Query: 183 FQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 L +GF D R + D YS+W Y + +N G RID+ +S L +A I Sbjct: 175 IDDLLKLGFIDTFREINGDIKEKYSWWSYRMKARERNVGWRIDYFFISTGLKDKLKNAFI 234 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 G SDH PV + +DI Sbjct: 235 RDDIFG----SDHAPVGIEIDI 252 >gi|300767631|ref|ZP_07077541.1| exodeoxyribonuclease III [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|300494616|gb|EFK29774.1| exodeoxyribonuclease III [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 265 Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats. Identities = 69/263 (26%), Positives = 111/263 (42%), Gaps = 13/263 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 V + +WNVN +RA + E + D C+QETK + + + + Sbjct: 12 VKLISWNVNGLRAAVKHGFVMTFNELDADFFCVQETKLQAGQIELD-FPGYYQYWNYAER 70 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K++P+ + + + D + R I + + G + Sbjct: 71 KGYSGTAIFTKHEPLNVTYGIGVPEFDDEGRVITLEYA---DYYVLTCYTPNSGGELKRL 127 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 Y + + L +PLIF GD N+ + D N + A FT E R Sbjct: 128 DYRQQW---EDAFLTYINSLSANKPLIFCGDLNVAHENIDLKNWRSNHHSAGFTDEERTK 184 Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L G+TD R + +YS+W Y + N G RID+ + S + S L +ARI Sbjct: 185 FDRLLAAGYTDTFRHFYPDQTDIYSWWSYRGHARDNNSGWRIDYFITSQQLDSQLLNARI 244 Query: 242 DTKPRGWTKPSDHTPVIVSLDIP 264 + G SDH PV + + +P Sbjct: 245 HNEIFG----SDHCPVELDIILP 263 >gi|330814067|ref|YP_004358306.1| exodeoxyribonuclease III [Candidatus Pelagibacter sp. IMCC9063] gi|327487162|gb|AEA81567.1| exodeoxyribonuclease III [Candidatus Pelagibacter sp. IMCC9063] Length = 247 Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats. Identities = 97/247 (39%), Positives = 141/247 (57%), Gaps = 2/247 (0%) Query: 15 RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKY 74 R R++ + ++K+ D++ LQE KTEDKNFP E + + YH + GQKSYNGVAI+SK Sbjct: 2 RIRVNQVKDYLKKKEIDVLVLQEIKTEDKNFPHEDFKKIGYHSYSFGQKSYNGVAIISKE 61 Query: 75 QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRF 134 + + Q+R I A + N + + ++YLP+GNPI + KYD K W+ F Sbjct: 62 ELKVTTSEFKD--PLGQSRCIAAEVSHNDKKFLLVSIYLPNGNPINTEKYDYKKKWMDVF 119 Query: 135 LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDA 194 ++ + + + +I GD+N+IP D NP W NDA F LE+R+ F+ L N+GF D Sbjct: 120 EKYIVGKFKKNKNIIITGDFNVIPSEEDVGNPEDWTNDALFKLEIRKKFRSLLNLGFKDG 179 Query: 195 IRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDH 254 R + Y+FWDY SW +NKG+RIDH ++S L + ID R +PSDH Sbjct: 180 FRLFNKEPKEYTFWDYQQGSWQRNKGLRIDHYLVSDSMIQDLKTIEIDKFTRDNERPSDH 239 Query: 255 TPVIVSL 261 P+ L Sbjct: 240 VPIRCVL 246 >gi|282855240|ref|ZP_06264572.1| exodeoxyribonuclease III [Propionibacterium acnes J139] gi|282581828|gb|EFB87213.1| exodeoxyribonuclease III [Propionibacterium acnes J139] gi|314924052|gb|EFS87883.1| exodeoxyribonuclease III [Propionibacterium acnes HL001PA1] gi|314965024|gb|EFT09123.1| exodeoxyribonuclease III [Propionibacterium acnes HL082PA2] gi|314983099|gb|EFT27191.1| exodeoxyribonuclease III [Propionibacterium acnes HL110PA3] gi|315090643|gb|EFT62619.1| exodeoxyribonuclease III [Propionibacterium acnes HL110PA4] gi|315093843|gb|EFT65819.1| exodeoxyribonuclease III [Propionibacterium acnes HL060PA1] gi|327326466|gb|EGE68255.1| exodeoxyribonuclease III [Propionibacterium acnes HL103PA1] Length = 297 Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats. Identities = 60/297 (20%), Positives = 107/297 (36%), Gaps = 37/297 (12%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +A++N+N IRA + + W++ + D+I LQE + + P + Sbjct: 1 MRIASFNINGIRAALKRGFSEWMEARDCDVIGLQEVRCRPADLPEGAFGDRHVSWAPGSL 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDL------------------------DVQARFIEAT 98 NGVA+L++ P E+ + + Sbjct: 61 AGRNGVALLTRTAPAEVRSWGTHLVMTPGQAPTPAQVLTGNTNGLPTELLPFADEGRYIE 120 Query: 99 FTINTQTLRIGNLYLPHGNPITS----------TKYDDKISWIKRFLRFASQRLELEEPL 148 + L + LYLP G K + +R + Sbjct: 121 VDLADTPLTVACLYLPKGATPDPANEKAIAKQDRKMAFLAGFRDHLVRRRQECTAQGRHF 180 Query: 149 IFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL--QNMGFTDAIRATHDTHHLYS 206 + GD+NI + D N +++ F E RQ F + + DT+ YS Sbjct: 181 LVMGDFNIAHENADLKNWKANQHNEGFLPEERQWFDTILSPDTLIDVVRAQHPDTNGPYS 240 Query: 207 FWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +W + ++ + G RID+ + SPE S ++ ID P + SDH V++ D+ Sbjct: 241 WWSWRGKAFVNDAGWRIDYHLASPELASKAITSEIDRDPSYSERTSDHAAVVIDYDL 297 >gi|146329467|ref|YP_001209345.1| exodeoxyribonuclease III [Dichelobacter nodosus VCS1703A] gi|146232937|gb|ABQ13915.1| exodeoxyribonuclease III [Dichelobacter nodosus VCS1703A] Length = 260 Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats. Identities = 79/265 (29%), Positives = 135/265 (50%), Gaps = 7/265 (2%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVNS+ R + + + K N+ DI+ LQE K ED + +++ET GQ Sbjct: 1 MTKIGSWNVNSLNVRKNQVIDYFKNNDLDILGLQELKQEDAAIDKKAFLDAGWYLETFGQ 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K+YNGVA+LSK P +V +P + +R+ NLY+P+G + Sbjct: 61 KTYNGVALLSKTPPENVVRGIPDYHDPAARAIAASYGA-----MRVLNLYVPNGKAVFDE 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K+ K+ W++ R+ + L+ GD+NI P D ++P ++ + R++ Sbjct: 116 KFHYKLEWLQHVQRYIAHLCAHYPHLVVIGDFNIAPTDRDVFDPRQFQEKLLCSDAERRA 175 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 L +G D+ R H +S+WDY ++W +N G+RID +++S + L +A ID Sbjct: 176 LHALFALGLRDSFREMHPEKTQFSWWDYRYNAWQRNLGLRIDLVLISSKL--RLIAADID 233 Query: 243 TKPRGWTKPSDHTPVIVSLDIPEPR 267 T+ R +PSDH+ V ++ P Sbjct: 234 TQTRQNERPSDHSVVWAQVENPSGE 258 >gi|114775670|ref|ZP_01451238.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Mariprofundus ferrooxydans PV-1] gi|114553781|gb|EAU56162.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Mariprofundus ferrooxydans PV-1] Length = 263 Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats. Identities = 62/263 (23%), Positives = 101/263 (38%), Gaps = 8/263 (3%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFE-TLQSLNYHIETCG 61 + + T N+N IR+ W + DI+CLQE K P E L+ + H Sbjct: 1 MKIITANLNGIRSATRKGFWEWFAAQDADILCLQELKAHIHQLPPESLLKDYHRHYHFAQ 60 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL--RIGNLYLPHGNPI 119 + Y+GVA+ S+ QP + L D +A Sbjct: 61 KPGYSGVALYSRKQPDTVHVGLGSIDPATDWSRFDAEGRFVMTDFGTLSVISAYFPSGSG 120 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 T + K+ ++++FL ++ + LI GD NI + D N ++ F E Sbjct: 121 TPERQAGKMVFLEQFLPLITRLKDQGRELIICGDINIAHRNIDLKNWRGNRKNSGFLPEE 180 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R F + N GF D R + YS+W + + N G RID+ + + + + Sbjct: 181 RAWFDQCLNAGFVDLFRQLYPEREQYSWWSNRGQARANNVGWRIDYHLCTQKTAATACEV 240 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 + T SDH PV + + Sbjct: 241 SVFTDA----WFSDHAPVTANFN 259 >gi|313206096|ref|YP_004045273.1| exodeoxyribonuclease iii xth [Riemerella anatipestifer DSM 15868] gi|312445412|gb|ADQ81767.1| exodeoxyribonuclease III Xth [Riemerella anatipestifer DSM 15868] gi|315023722|gb|EFT36725.1| Exodeoxyribonuclease III [Riemerella anatipestifer RA-YM] gi|325336460|gb|ADZ12734.1| Exonuclease III [Riemerella anatipestifer RA-GD] Length = 253 Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats. Identities = 72/263 (27%), Positives = 119/263 (45%), Gaps = 14/263 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC-- 60 + + ++NVN IRA +L W+ PD+IC QE+K + + + YH Sbjct: 1 MKIISYNVNGIRAAFNKDLIGWLGHAAPDVICFQESKAQKDQIDIASFEKEGYHTYWFSA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GV I +K QP + + D + R I F + ++Y+P I Sbjct: 61 EKKGYSGVGIATKIQPKHVEYGCDMELYDKEGRVIRVDFE----DFSVISVYVPSATNID 116 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EV 179 D K+ + FL + + + LI +GD+NI Q D ++P+ +N + F E Sbjct: 117 R--LDFKMQFCYDFLAYIKELRKTIPNLIISGDFNICHQAIDIHDPVRLKNVSGFLPIER 174 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + L+ G D+ R + + YS+W Y ++ + NKG R+D+ +S S L Sbjct: 175 EWMTEFLKECGLIDSFRYFNTEPNQYSWWSYRQNARANNKGWRLDYHFVSDSLESRLSRG 234 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 I + SDH PV+V L Sbjct: 235 LILSDAY----HSDHCPVLVELK 253 >gi|254468203|ref|ZP_05081609.1| exodeoxyribonuclease III [beta proteobacterium KB13] gi|207087013|gb|EDZ64296.1| exodeoxyribonuclease III [beta proteobacterium KB13] Length = 259 Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats. Identities = 72/265 (27%), Positives = 124/265 (46%), Gaps = 15/265 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60 + V T N+N IR+ + W++ + D IC+QE K ++K+ E L Y + Sbjct: 1 MRVITVNLNGIRSALRKGFFEWMRIQDADFICIQELKAQEKDMTEEMLNINGYAGYFSYA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + Y+GV I +K +P +I++ L D +D + R+IE + + I + Y P G+ Sbjct: 61 EKPGYSGVGIYTKIKPKKIISKLNFDTIDDEGRYIE----LIYDDVSIISSYFPSGS-SG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + + K +++K + + + +E +I GD NI + D N + ++ F E R Sbjct: 116 DIRQEIKFNFLKFMTELLNLKTQKKEKIILCGDLNIAHKEIDLKNHKGNKKNSGFLPEER 175 Query: 181 QSFQKLQNM-GFTDAIRATHDTHHL--YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 L G+ D R + Y++W +W+ N G RID+ M SP T + Sbjct: 176 AWITNLIEEIGWKDTYRNIYPNEEELAYTWWSNRGQAWANNVGWRIDYQMTSPSLTFQIK 235 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLD 262 A + + R SDH+P+IV D Sbjct: 236 DAVVYKEER----FSDHSPLIVDYD 256 >gi|217969119|ref|YP_002354353.1| exodeoxyribonuclease III Xth [Thauera sp. MZ1T] gi|217506446|gb|ACK53457.1| exodeoxyribonuclease III Xth [Thauera sp. MZ1T] Length = 260 Score = 171 bits (432), Expect = 1e-40, Method: Composition-based stats. Identities = 69/267 (25%), Positives = 117/267 (43%), Gaps = 15/267 (5%) Query: 3 VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59 ++ + T N+N IR A L W+ D +C+QE K +D + E Sbjct: 1 MLRIITLNLNGIRSACTKGLLDWLPAQQADFLCVQELKAQDADLRPEMRAPAGMQGWFHA 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GV I S++ P +V L +D + RF++ F L + +LYLP G+ Sbjct: 61 AEKKGYSGVGIYSRHAPDRVVEGLGIPAIDAEGRFLQLDFG----KLSVVSLYLPSGSSS 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K ++ RFL Q + + ++ GD+NI + D N + ++ F E Sbjct: 117 AERQQV-KFDFMDRFLPHMDQLFQSGQEVVVCGDWNIAHREADLKNWKSNQKNSGFLPEE 175 Query: 180 RQSFQKLQNMG-FTDAIRATHDT--HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 R +L + + D R H Y++W +W+KN G R+D+ + +P + Sbjct: 176 RAWLGRLFDEQGWIDVYRRLHPEATEACYTWWSNRGQAWAKNVGWRLDYQVATPGLAASA 235 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263 +A + R SDH P+ V D Sbjct: 236 QAAEVYKAQR----FSDHAPLTVDYDW 258 >gi|270159291|ref|ZP_06187947.1| exodeoxyribonuclease III [Legionella longbeachae D-4968] gi|289165885|ref|YP_003456023.1| exodeoxyribonuclease [Legionella longbeachae NSW150] gi|269987630|gb|EEZ93885.1| exodeoxyribonuclease III [Legionella longbeachae D-4968] gi|288859058|emb|CBJ12987.1| putative exodeoxyribonuclease [Legionella longbeachae NSW150] Length = 260 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 71/264 (26%), Positives = 121/264 (45%), Gaps = 14/264 (5%) Query: 4 VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKN-FPFETLQSLNYHI--ET 59 + V ++N N IR A + W+ + D +C+QETK + P E +Y+ + Sbjct: 1 MKVISFNANGIRSAARNGFYEWLVTQDADFVCIQETKVQPDQLIPEEIYYPRDYYCDYYS 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GVAI ++ +P+ ++ + D D + R+I+ + I +LYLP G Sbjct: 61 AQKKGYSGVAIYARNKPLRVIKGIGFDYCDNEGRYIQFDYP----KFSIVSLYLPSG-TS 115 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + + K ++++F Q LI GDYNI + D N ++ F E Sbjct: 116 GEQRQEVKYQFLEQFANHLMQLKNEGRELIICGDYNIAHKEIDLKNWKSNRKNSGFLPEE 175 Query: 180 RQSFQKLQN-MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R +L MGF DA R + Y++W + +W KN G RID+ +++P + Sbjct: 176 RAWMDELFGGMGFVDAFRVHNQEEEQYTWWSFRGRAWEKNVGWRIDYQVVTPGFIEDVVY 235 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 + I R SDH P+++ Sbjct: 236 SHIFRDVR----LSDHAPLLIEYK 255 >gi|319409386|emb|CBI83030.1| exodeoxyribonuclease III [Bartonella schoenbuchensis R1] Length = 271 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 79/265 (29%), Positives = 119/265 (44%), Gaps = 9/265 (3%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQK 63 +ATWNVNSIR R+ + ++ PDI+CLQETK D FP E Q+ Y HI GQK Sbjct: 4 RIATWNVNSIRLRLAQVLQYLDLFAPDILCLQETKCPDHLFPREPFQAAGYEHIALSGQK 63 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 SY+GVA++S+ +++ + R++ + +RI N Y+P G Sbjct: 64 SYHGVAVVSRLPLLDVEKRFFCQ--KEECRYLSVVVQPCGRAIRIHNFYVPAGGDEPDVS 121 Query: 124 YDDKISWIKRF---LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EV 179 ++K F + + GD NI P D ++ N T E Sbjct: 122 VNEKFRHKLDFLEEMSSIRADQGDGLSSLLLGDLNIAPLEDDVWSHKKLLNVVSHTPVET 181 Query: 180 RQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLH 237 + + G+ D +R LY++W Y A ++ ++G R+DHI SP+ + Sbjct: 182 ERLQALCREGGWIDLMRIKFPVPAKLYTWWSYRARDFALSDRGRRLDHIWSSPDLAPFMD 241 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLD 262 I RG +PSDH PV D Sbjct: 242 DLSIFRAARGEPQPSDHVPVQTVFD 266 >gi|308176500|ref|YP_003915906.1| exodeoxyribonuclease III [Arthrobacter arilaitensis Re117] gi|307743963|emb|CBT74935.1| exodeoxyribonuclease III [Arthrobacter arilaitensis Re117] Length = 279 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 61/263 (23%), Positives = 112/263 (42%), Gaps = 6/263 (2%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + VA+ NVN IRA N+A WI + DI+CLQE + DK + + Sbjct: 16 LRVASVNVNGIRAAYKRNMADWIAARDVDILCLQEVRAPDKILRDLIGEGWHILHAEAKD 75 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K GVA+LS+ P+ + H+ D R++EA F +N + + + Y+ G + + Sbjct: 76 KGRAGVAVLSRTAPVAVREHIGEDYFAESGRWVEADFEVNGEVFTVVSAYVHSGE-LGTQ 134 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K +DK +++R + ++ ++ GD N++ D N N ++ + Sbjct: 135 KQEDKYRFLQRMNVRLVELKNEKDHVLVVGDLNVVHTQKDIKNWKPNHNKRAGVMDEEIA 194 Query: 183 FQKLQNMGFTDA----IRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 + D Y++W + ++ + G RID+ M +P + Sbjct: 195 YFDGFFGPQIGYKDVARELAGDVQGPYTWWSFRGQAFDNDAGWRIDYHMATPALAAKAIK 254 Query: 239 ARIDTKPRGWTKPSDHTPVIVSL 261 + +D + SDH P++V Sbjct: 255 SHVDRASAYDLRFSDHAPLVVDY 277 >gi|68535324|ref|YP_250029.1| exodeoxyribonuclease III [Corynebacterium jeikeium K411] gi|68262923|emb|CAI36411.1| exodeoxyribonuclease III [Corynebacterium jeikeium K411] Length = 266 Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats. Identities = 75/271 (27%), Positives = 121/271 (44%), Gaps = 18/271 (6%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+NS+R R + +++ + D++CLQETK DK FP Y G Sbjct: 1 MRIATWNINSVRTREDRVREFLQRSEVDVLCLQETKCTDKQFP--DFTDTGYEQAHFGLH 58 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQ----ARFIEATFTINTQTLRIGNLYLPHGNPI 119 S+NGVAILS+ ++ T + + + +LY+P+G I Sbjct: 59 SFNGVAILSRVGLADVQTDFGQPGFNKDLDAEQALEARAIGATCGGVEVWSLYVPNGREI 118 Query: 120 TSTKYDDKISWIKRFLRFA------SQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 Y K+ W+ +A + + + E L GDYNI P+ D ++ ++ Sbjct: 119 ADPHYSYKLRWLDALAAYAAGSGVGASQRKSSEKLCLVGDYNIAPRDEDVWDRSYFDGRT 178 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 T R + L++ G + A + Y++WDY A + K +G+RID T Sbjct: 179 HVTPNERARLRALEDAGLSAATDLI---ANEYTYWDYQAMRFQKGEGMRIDLQYA-RGIT 234 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 +AR+D R SDH PVIV ++ Sbjct: 235 P--TAARVDRDERKGKGASDHAPVIVDYNVD 263 >gi|89052912|ref|YP_508363.1| exodeoxyribonuclease III [Jannaschia sp. CCS1] gi|88862461|gb|ABD53338.1| exodeoxyribonuclease III [Jannaschia sp. CCS1] Length = 262 Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats. Identities = 81/264 (30%), Positives = 119/264 (45%), Gaps = 10/264 (3%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQK 63 T+ATWN+NS+R R ++ + E PDI+CLQE K+ P + +L Y H+ GQK Sbjct: 4 TLATWNINSVRLRQPIVSQLMTEEAPDILCLQECKSPVDKMPSDVFAALGYTHVVARGQK 63 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 YNGVAI SK E +H + + I N Y+P G + Sbjct: 64 GYNGVAIYSKLPMEEAGSHEFAGLDHARHIAGRLENG-----VTIHNFYVPAGGDVPDRD 118 Query: 124 YDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180 + K +L + + P GD NI P+ D ++ T EV Sbjct: 119 VNIKFGQKLDYLTDMRDWAKTDTPQKSILLGDLNIAPREDDVWSHKQLLKVVSHTPIEVE 178 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLLHSA 239 + G+ D R L+S+W Y + W +KG R+DH+ +P+ ++ HS+ Sbjct: 179 HLAEAQDAGGWVDVTRKDIPDGPLFSWWSYRSPDWDNADKGRRLDHVWATPDISNAAHSS 238 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 RI RGW KPSDH PV + D+ Sbjct: 239 RIARHVRGWEKPSDHAPVFATFDL 262 >gi|126651518|ref|ZP_01723722.1| exodeoxyribonuclease [Bacillus sp. B14905] gi|126591771|gb|EAZ85867.1| exodeoxyribonuclease [Bacillus sp. B14905] Length = 251 Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats. Identities = 64/260 (24%), Positives = 110/260 (42%), Gaps = 13/260 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN IRA + + + D C+QETK + L + + Sbjct: 1 MKFISWNVNGIRACLGKGFLDFFHQIEADFFCIQETKCQAGQVEL-ALDDYEQYWNYAQK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K+ P+ ++ + +D + R I + Q + N+Y P+ + Sbjct: 60 KGYSGTAIFTKHTPLSVMYGVGDEDSQDEGRIITLEY----QNFYLVNVYTPNAQRDLAR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + L Q L ++P+++ GD N+ D N ++ FT E R Sbjct: 116 L--PLRLTWEDRLAGYLQDLNSKKPVVYCGDLNVAHTEIDLKNAKSNVGNSGFTYEERAK 173 Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L GF D+ R H +++W Y +N G RID+ ++S + + + A I Sbjct: 174 FSELLASGFVDSFRYKHPNETDHFTWWSYMNKVRERNIGWRIDYFIVSEQLKNQIDQATI 233 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 G SDH P+ + L Sbjct: 234 HPHIMG----SDHCPIELQL 249 >gi|114571487|ref|YP_758167.1| exodeoxyribonuclease III [Maricaulis maris MCS10] gi|114341949|gb|ABI67229.1| exodeoxyribonuclease III [Maricaulis maris MCS10] Length = 270 Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats. Identities = 74/269 (27%), Positives = 127/269 (47%), Gaps = 12/269 (4%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETC 60 +T+A+WN+NS+R R + +A W++E +PD++CLQE K ++ FP E + + + H Sbjct: 2 TLTLASWNINSVRLRAVPLIADWVQEADPDVLCLQEIKCLEEQFPEEAFREMGFRHFHVR 61 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 GQK +GVAI SKY ++ + + + + I I +P Sbjct: 62 GQKGMHGVAIASKYPLEDLGDVELCPRGEARHQRVGVE-GIELHNFYIPAG-GDEPDPAI 119 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + ++ K+ ++ R R+ + R L+ GD+NI P HD ++ T Sbjct: 120 NPRFAHKLEFLDRIERYFAGRASENAALVLVGDFNIAPYEHDVWSHKQLLKVVSHTPVEV 179 Query: 181 QSFQKLQNMGFTDAIRA--THDTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLLH 237 ++ ++++ G + +Y++W Y A W + N+G R+DHI SP A Sbjct: 180 EALERIRQAGQFSDVARELIPMDEKIYTWWSYRAKDWRAANRGRRLDHIWASPAARDRAL 239 Query: 238 -----SARIDTKPRGWTKPSDHTPVIVSL 261 + RI R KPSDH PV ++L Sbjct: 240 AGGRDAFRIWEDERSREKPSDHAPVALTL 268 >gi|199597303|ref|ZP_03210734.1| Exonuclease III [Lactobacillus rhamnosus HN001] gi|199591819|gb|EDY99894.1| Exonuclease III [Lactobacillus rhamnosus HN001] Length = 253 Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats. Identities = 67/258 (25%), Positives = 110/258 (42%), Gaps = 12/258 (4%) Query: 3 VVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ + +WNVN +RA + E + D CLQETK + + L + Sbjct: 1 MLKMISWNVNGLRAVLKKDFMTIFNELDADWFCLQETKMQAGQVELD-LPGYYQYFNYAE 59 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G AI +K++P+ + + + D + R I +T + Sbjct: 60 RKGYSGTAIFTKHKPLNVTYGMGIPEHDTEGRIITLEYTKFYLMTVYTPNSGGELKRLDY 119 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + R + L ++PL++ GD N+ +P D N ++A FT E R Sbjct: 120 RQQ------WDRDFLAYTNELAAKKPLVYCGDLNVAHEPIDLKNDKTNHHNAGFTDEERA 173 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F K N GF D R + YS+W Y+ + + N G RID+ + S + A+I Sbjct: 174 DFTKQLNSGFIDTFRHFYPDTVTYSWWSYHFHARANNAGWRIDYFVASSAFQPYIQDAKI 233 Query: 242 DTKPRGWTKPSDHTPVIV 259 T+ G SDH PV + Sbjct: 234 LTQIMG----SDHCPVEL 247 >gi|320536290|ref|ZP_08036333.1| exodeoxyribonuclease III [Treponema phagedenis F0421] gi|320146850|gb|EFW38423.1| exodeoxyribonuclease III [Treponema phagedenis F0421] Length = 258 Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats. Identities = 55/256 (21%), Positives = 90/256 (35%), Gaps = 5/256 (1%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ + +WNVN IRA A W+ +PDI+CLQE K + E L + Sbjct: 1 MLNIISWNVNGIRAVEKKGFADWLYNESPDILCLQEIKARKEQVSGELLAPVWEGGTYKT 60 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 S +D++ E + Sbjct: 61 FWQPAKRPGYSGTALFTKKEPDNIRIMDLEEFDSEGRVIAADFGKLTVISAYFPNSQDAG 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + K+ + F + + +I GDYNI +P D NP E + + E R+ Sbjct: 121 ARLAYKLEFCAAMREFCDNLQKEGQDVILCGDYNIAHKPIDLANPKTNEKNPGYLPEERE 180 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 G+ D R Y++W Y + +N G RID+ ++ + + S+ I Sbjct: 181 WMDVFTGAGYVDTFRHFCAEPEHYTWWTYRFKARERNVGWRIDYHCVNEDFLPKVKSSII 240 Query: 242 DTKPRGWTKPSDHTPV 257 G SDH P+ Sbjct: 241 LKDVFG----SDHCPI 252 >gi|54022898|ref|YP_117140.1| putative exonuclease [Nocardia farcinica IFM 10152] gi|54014406|dbj|BAD55776.1| putative exonuclease [Nocardia farcinica IFM 10152] Length = 259 Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats. Identities = 68/262 (25%), Positives = 105/262 (40%), Gaps = 14/262 (5%) Query: 6 VATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL--NYHIETCGQ 62 VAT NVN +RA + AW+ DI+CLQET+ D+ +L + + Sbjct: 5 VATINVNGVRAAAGKGMLAWLAATEADIVCLQETRATDEQTAVALAPALADGWQLAHAEP 64 Query: 63 --KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 K GV ILS+ P + + D R++EA F + + ++Y+ G+ T Sbjct: 65 GAKGRAGVGILSRRAPDAVRIGFGSSEFDGSGRYLEADFG----EVTVASVYVHSGDAGT 120 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + + F + + GD+NI D N A F E R Sbjct: 121 ----PRQDEKYRFMTEFGAYLKARTGDFVVCGDWNIAHTERDLKNWKGNRKSAGFLPEER 176 Query: 181 QSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 +L G+ D +RA H YS+W Y ++ + G RID+ + E A Sbjct: 177 AWIDELLAAGYVDVVRALHPDVDGPYSWWSYRGRAFDNDSGWRIDYHLARGELAGRAKQA 236 Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261 ++ P + SDH PV V Sbjct: 237 VVERAPSYDQRWSDHAPVTVQY 258 >gi|319899428|ref|YP_004159525.1| exodeoxyribonuclease III [Bartonella clarridgeiae 73] gi|319403396|emb|CBI76964.1| exodeoxyribonuclease III [Bartonella clarridgeiae 73] Length = 272 Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats. Identities = 78/264 (29%), Positives = 121/264 (45%), Gaps = 9/264 (3%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64 +ATWN+NSIR R+ + ++ + DI+CLQETK D FP E ++ Y +I GQKS Sbjct: 5 IATWNINSIRFRLSQVLQYLDICSVDILCLQETKCSDDLFPREFFEAAGYQYIALNGQKS 64 Query: 65 YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124 Y+GVAI+S+ + + R + ++ + +RI N Y+P G Sbjct: 65 YHGVAIISRLPFVSVEKRFFC--HKEDCRHLSVVIELHGRRIRIHNFYIPAGGDEPDVNK 122 Query: 125 DDKISWIKRF---LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180 ++K F + E + GD NI P P D ++ T E Sbjct: 123 NEKFRHKLDFLEEMSSIRADQEDGLESLLLGDLNIAPLPEDVWSHKQLLKVVSHTPIETE 182 Query: 181 QSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHS 238 + + G+ D +R LY++W Y A W+ ++G R+DH+ SP + + Sbjct: 183 RLQALCREGGWVDLMRMKFPVPIKLYTWWSYRARDWALADRGRRLDHVWSSPNLAAFVKD 242 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 I RGW++PSDH PV D Sbjct: 243 LVIFRDARGWSQPSDHVPVQTLFD 266 >gi|169829765|ref|YP_001699923.1| exodeoxyribonuclease [Lysinibacillus sphaericus C3-41] gi|168994253|gb|ACA41793.1| Exodeoxyribonuclease [Lysinibacillus sphaericus C3-41] Length = 251 Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats. Identities = 63/262 (24%), Positives = 110/262 (41%), Gaps = 13/262 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN IRA + + + D C+QETK + L + + Sbjct: 1 MKFISWNVNGIRACLGKGFLDFFHQIEADFFCIQETKCQAGQVEL-ALDGYEQYWNYAQK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K+ P+ + + +D + R I + + N+Y P+ + Sbjct: 60 KGYSGTAIFTKHTPLSVKYGVGDEDSQDEGRIITLEYE----DFYLVNVYTPNAQRDLAR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + L Q L ++P+++ GD N+ D N ++ FT E R Sbjct: 116 L--PLRLTWEEHLASYLQDLNSKKPVVYCGDLNVAHTEIDLKNAKSNIGNSGFTYEERAK 173 Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L GF D+ R H +++W Y +N G RID+ ++S + + ++ A I Sbjct: 174 FSELLASGFVDSFRYKHPNETDHFTWWSYMNKVRERNIGWRIDYFIVSEQLKNQINQATI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 G SDH P+ + L + Sbjct: 234 HPHIMG----SDHCPIELQLHV 251 >gi|89902688|ref|YP_525159.1| exodeoxyribonuclease III [Rhodoferax ferrireducens T118] gi|89347425|gb|ABD71628.1| exodeoxyribonuclease III [Rhodoferax ferrireducens T118] Length = 263 Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats. Identities = 69/267 (25%), Positives = 109/267 (40%), Gaps = 12/267 (4%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTE--DKNFPFETLQSLNYHIET 59 + + + N+N IR+ L AW+ + PD IC+QE K + D FE L L H Sbjct: 1 MFKLTSLNLNGIRSATAKGLEAWLTKTQPDCICVQEVKAQALDVQDRFEHLAGLRGHFHF 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GV + S+++P ++ D + R++E F + I + Y P G+ Sbjct: 61 AEKKGYSGVGLYSRHEPSDVRVGYGSSQFDAEGRYVELRFDTPSAKRSIISCYFPSGSSG 120 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + +L+ I GD NI Q D N ++ F E Sbjct: 121 EERQQA--KFRFLEEFYLHLAQLKNGREFILCGDVNIAHQEIDLKNWKGNRKNSGFLPEE 178 Query: 180 RQSFQKL-QNMGFTDAIRATHDT--HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 R KL G D R T Y++W +++KN G R+D+ + +P +L Sbjct: 179 RAWMTKLLTEAGLVDVYRQLQPTATDEAYTWWSNRGQAYAKNVGWRLDYHLATPAMAALA 238 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263 S I K SDH P+ + D Sbjct: 239 RSETIYKA----EKFSDHAPLTIEYDW 261 >gi|47087383|ref|NP_998586.1| DNA-(apurinic or apyrimidinic site) lyase [Danio rerio] gi|33416367|gb|AAH55545.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Danio rerio] Length = 310 Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats. Identities = 75/262 (28%), Positives = 124/262 (47%), Gaps = 16/262 (6%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQ----SLNYHIE 58 + + +WNV+ +RA + N W+++ +PDI+CLQETK +K P + Y Sbjct: 55 MKITSWNVDGLRAWVKKNGLDWVRKEDPDILCLQETKCAEKALPADITAMPEYPHKYWAG 114 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + ++ Y+GVA+L K +P+ + + ++ D + R I A F Sbjct: 115 SEDKEGYSGVAMLCKTEPLNVTYGIGKEEHDKEGRVITAEFPDF-----FLVTAYVPNAS 169 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + D + +W F + L+ +PL+ GD N+ Q D NP +A FT E Sbjct: 170 RGLVRLDYRKTWDVDFRAY-LCGLDARKPLVLCGDLNVAHQEIDLKNPKGNRKNAGFTPE 228 Query: 179 VRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 R+ F +L GFTD+ R + + Y+FW Y ++ SKN G R+D+ +LS L Sbjct: 229 EREGFTQLLEAGFTDSFRELYPDQAYAYTFWTYMMNARSKNVGWRLDYFVLSSALLPGLC 288 Query: 238 SARIDTKPRGWTKPSDHTPVIV 259 ++I G SDH P+ + Sbjct: 289 DSKIRNTAMG----SDHCPITL 306 >gi|326402657|ref|YP_004282738.1| exodeoxyribonuclease III [Acidiphilium multivorum AIU301] gi|325049518|dbj|BAJ79856.1| exodeoxyribonuclease III [Acidiphilium multivorum AIU301] Length = 267 Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats. Identities = 82/268 (30%), Positives = 117/268 (43%), Gaps = 6/268 (2%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIET 59 M+ +TVATWN+NS+R R L + + + PDI+CLQETK D FP + +L H+ Sbjct: 1 MTALTVATWNINSVRLRRDLLHSLMDQAAPDIVCLQETKVPDDLFPEDLGTALGLPHVLK 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 G K YNGVAILS+ + P + R I A T L + N Y+P G I Sbjct: 61 RGMKGYNGVAILSRLPLTAVE-DTPDWCMKSDCRHIAARIDTGTDPLVLHNFYVPAGGDI 119 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFA--GDYNIIPQPHDCYNPIIWENDACF-T 176 + K F+ A + P GD NI P +D ++ N Sbjct: 120 PDRAENPKYGHKLDFIAEARDHFAMNRPHRTMLVGDLNIAPLENDVWSHKQLLNVVSHTP 179 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSL 235 E D L+++W Y W + N+G R+DHI +S + Sbjct: 180 PETEGLNAWRTEGFIDAIRHFVPDDQKLFTWWSYRNRDWRASNRGRRLDHIWVSTDLIGN 239 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 L I R W + SDH PV+++LD+ Sbjct: 240 LARHAILQDARDWERGSDHVPVVLALDL 267 >gi|269218782|ref|ZP_06162636.1| exodeoxyribonuclease III [Actinomyces sp. oral taxon 848 str. F0332] gi|269211893|gb|EEZ78233.1| exodeoxyribonuclease III [Actinomyces sp. oral taxon 848 str. F0332] Length = 265 Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats. Identities = 60/268 (22%), Positives = 99/268 (36%), Gaps = 11/268 (4%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +AT NVN IRA + WI D++ LQE + ++ L Y Sbjct: 1 MRIATCNVNGIRAAARKGMGEWIASAKADVLLLQEVRAPEELV--APLVGEGYKTIPWPC 58 Query: 63 KSYNG----VAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + VA+ + +V + GDD + LR+ + YL G+ Sbjct: 59 EIKGRAGVAVAVREGIETGAVVRGV-GDDQPPVDTGRWLEVELPELGLRVVSAYLHSGDS 117 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ--PHDCYNPIIWENDACFT 176 + K D K + + + ++ E + AGD+NI+ + Sbjct: 118 SSKEKMDAKYAHLDLVEKRLAELSEGGGRFLVAGDFNIVHTPLDITNWKSNHNRTSGVLD 177 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E+ + MG D R Y++W ++ N G RID+ + SP Sbjct: 178 EEIAYLDRWFGQMGLADVQRRLDPDSQGPYTWWSQRGKAFDNNTGWRIDYHLASPSLAEK 237 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + RID P + SDH P+IV + Sbjct: 238 ADAYRIDRAPSYDARFSDHAPLIVDYTL 265 >gi|255263312|ref|ZP_05342654.1| exodeoxyribonuclease III [Thalassiobium sp. R2A62] gi|255105647|gb|EET48321.1| exodeoxyribonuclease III [Thalassiobium sp. R2A62] Length = 262 Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats. Identities = 79/264 (29%), Positives = 117/264 (44%), Gaps = 10/264 (3%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQK 63 T+ATWN+NS+R R + +++ PD++CLQE K+ + P E +L Y HI GQK Sbjct: 4 TLATWNINSVRLREGIVCDLLEQEAPDVLCLQECKSPVEKIPTERFAALGYSHIVARGQK 63 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 YNGVAILSK G + + I N Y+P G + + Sbjct: 64 GYNGVAILSKLPLE-----DMGSEDFAGLGHARHVAAKLPNGVVIHNHYVPAGGDVPDRE 118 Query: 124 YDDKISWIKRFLRFASQRLE--LEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180 ++K +L + + I GD NI P+ D ++ T EV Sbjct: 119 VNEKFGQKLDYLADMERDFRAAPPKRAILVGDLNIAPREDDVWDHKKLLKIISHTPVEVE 178 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHSA 239 + + D RA LYS+W Y A W +KG R+DH+ + + + + Sbjct: 179 AFNAVMAAGDWVDVTRADIPEGLLYSWWSYRAKDWDAADKGRRLDHVWATSDIAASASGS 238 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 R+ RGW KPSDH PV + D+ Sbjct: 239 RVIRYVRGWEKPSDHAPVFATFDL 262 >gi|146279157|ref|YP_001169316.1| exodeoxyribonuclease III Xth [Rhodobacter sphaeroides ATCC 17025] gi|145557398|gb|ABP72011.1| exodeoxyribonuclease III Xth [Rhodobacter sphaeroides ATCC 17025] Length = 262 Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats. Identities = 72/265 (27%), Positives = 109/265 (41%), Gaps = 8/265 (3%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 T+ATWN+NS+R R ++ + E PDI+CLQE K+ + P E ++L Y+ Sbjct: 2 TFTLATWNINSVRLREALVSRLLTEEMPDILCLQECKSPVEKMPLEAFRALGYNWCVARG 61 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 + + P+ GD + I N Y+P G I Sbjct: 62 QKSYNGVAILSKLPLVD----AGDHDFADLGHARHVSATLGNGVTIHNCYVPAGGDIPDR 117 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL-EV 179 + + K +L + P GD NI P+ D +N T EV Sbjct: 118 EQNVKFGQKLDYLTRMRDWCRSDTPRKAILVGDLNIAPREDDVWNHKALLKIVSHTPIEV 177 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHS 238 ++ + D R LYS+W Y + W +KG R+DHI +P+ + H Sbjct: 178 DHLNALMEAGAWIDVTRKDLPEGRLYSWWSYRSPDWEAADKGRRLDHIWATPDIANAAHG 237 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263 +RI RGW +PSDH PV + D+ Sbjct: 238 SRILRAARGWLQPSDHAPVFATFDL 262 >gi|113983|sp|P23196|APEX1_BOVIN RecName: Full=DNA-(apurinic or apyrimidinic site) lyase; AltName: Full=APEX nuclease; Short=APEN; AltName: Full=Apurinic-apyrimidinic endonuclease 1; Short=AP endonuclease 1; AltName: Full=REF-1; AltName: Full=Redox factor-1; Contains: RecName: Full=DNA-(apurinic or apyrimidinic site) lyase, mitochondrial gi|118|emb|CAA40014.1| BAP 1 [Bos taurus] Length = 318 Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats. Identities = 73/269 (27%), Positives = 126/269 (46%), Gaps = 17/269 (6%) Query: 2 SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN----YH 56 + + + +WNV+ +RA I W+KE PDI+CLQETK + P E + Y Sbjct: 60 ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPVELQELSGLSHQYW 119 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 ++ Y+GV +LS+ P+++ + ++ D + R I A + + + G Sbjct: 120 SAPSDKEGYSGVGLLSRQCPLKVSYGIGEEEHDQEGRVIVAEY---DAFVLVTAYVPNAG 176 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + +Y + R + L +PL+ GD N+ + D NP + +A FT Sbjct: 177 RGLVRLEYRQRWDEAFRKF---LKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 233 Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E + + LQ + TD+ R + + Y+FW Y ++ SKN G R+D+ +LS Sbjct: 234 PQERQGFGELLQAVPLTDSFRHLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSQSVLP 293 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 L ++I +K G SDH P+ + L + Sbjct: 294 ALCDSKIRSKALG----SDHCPITLYLAL 318 >gi|325919691|ref|ZP_08181693.1| exodeoxyribonuclease III [Xanthomonas gardneri ATCC 19865] gi|325549799|gb|EGD20651.1| exodeoxyribonuclease III [Xanthomonas gardneri ATCC 19865] Length = 266 Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats. Identities = 63/273 (23%), Positives = 108/273 (39%), Gaps = 24/273 (8%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + ++N N +R+ W + D++C+QETK ++ Y Sbjct: 1 MRIISFNANGLRSATTKGFFEWFATQDADVLCVQETKAQEHQLAGPKFLPTGYKAWFRDA 60 Query: 62 --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GVAI S+++P E+ T L + D + R+IEA F L + + Y+P G+ Sbjct: 61 STKKGYSGVAIYSRHEPDEVRTALGWPEFDEEGRYIEARFG----NLSVVSFYIPSGS-S 115 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K ++ + L + GD+NI+ D N + ++ Sbjct: 116 GELRQGYKFQVMEWLRPILDEWLASGRQYVLCGDWNIVRTALDIKNWKSNQKNSGCLPPE 175 Query: 180 RQSFQKLQN-----------MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 R L G+ D R H Y++W + + N G RID+ ++ Sbjct: 176 RDWLNGLCADAPEEANAANGRGWVDTYRVLHPQGEDYTWWSNRGAARANNVGWRIDYQLV 235 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +P L I + R SDH P IV Sbjct: 236 TPWMRDKLQRCAIYREQR----FSDHAPYIVDY 264 >gi|114769839|ref|ZP_01447449.1| exodeoxyribonuclease III, putative [alpha proteobacterium HTCC2255] gi|114549544|gb|EAU52426.1| exodeoxyribonuclease III, putative [alpha proteobacterium HTCC2255] Length = 262 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 76/265 (28%), Positives = 119/265 (44%), Gaps = 10/265 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62 + V +WN+NS+R R ++ + E PD++CLQE K+ + P E L Y ++ GQ Sbjct: 3 IKVCSWNINSVRLREDSVCRLLSEETPDVLCLQECKSPEDKIPTEKFSKLGYKYLIASGQ 62 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K YNGVAILS+ EI + + +N + P G I Sbjct: 63 KGYNGVAILSRLPLKEIARRDFASLEHARHIAVNVDNKLNIHNFYV-----PAGGDIPDR 117 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL-EV 179 ++K +L ++ + ++P GD NI P D ++ T E+ Sbjct: 118 NINEKFGQKLDYLSEMAEYFQSQKPQKSILVGDLNIAPGEEDVWDHKKLLKIVSHTPQEI 177 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLLHS 238 + + + + + D IR + LYS+W Y A W NKG R+DHI + + + Sbjct: 178 QALNEVMLSANWVDIIRKDIPSGLLYSWWSYRARDWDTANKGRRLDHIWATKDIADKGYG 237 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263 + I RGW KPSDH P+ S D+ Sbjct: 238 SYISRDVRGWEKPSDHAPIFSSFDL 262 >gi|300780401|ref|ZP_07090257.1| possible exodeoxyribonuclease III [Corynebacterium genitalium ATCC 33030] gi|300534511|gb|EFK55570.1| possible exodeoxyribonuclease III [Corynebacterium genitalium ATCC 33030] Length = 260 Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats. Identities = 73/265 (27%), Positives = 120/265 (45%), Gaps = 19/265 (7%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + VATWN+NS+R RI A+++ N+ D++ +QETK D FP+ ++ Y + G Sbjct: 1 MRVATWNINSVRTRIDRAVAFLERNDVDVLAMQETKCSDDKFPYSAFEAAGYDVAHVGYH 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-----TQTLRIGNLYLPHGNP 118 +NGVAI+S+ + G + + + +LY+P+G Sbjct: 61 QWNGVAIISRVGLENVRDGFDGQPGFNKEPDAPQDREARAVAATCGGVEVWSLYVPNGRE 120 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 I YD K+ ++ R +++++ P +F GDYNI P D ++ +E T Sbjct: 121 IGDRHYDYKLEFLWR----LAEQIDPSTPQVFCGDYNIAPTDKDVWDRAFFEGKTHVTEP 176 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R +F+ L G A YS+WDY + K +G+ ID + + Sbjct: 177 ERAAFEALLEAGLNQAT-----HPEPYSYWDYKGMRFQKGEGMLIDFQL--SGLEG---A 226 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263 +DT R SDH PV+V D+ Sbjct: 227 GFVDTHEREGKGTSDHAPVVVDYDL 251 >gi|241206774|ref|YP_002977870.1| exodeoxyribonuclease III Xth [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860664|gb|ACS58331.1| exodeoxyribonuclease III Xth [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 267 Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats. Identities = 76/264 (28%), Positives = 112/264 (42%), Gaps = 9/264 (3%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64 + TWN+NS+R R+ + + ++ PDI+CLQETK + FP L++L Y HI GQK Sbjct: 5 ITTWNINSVRLRMPIVEQLVLKHRPDILCLQETKVTNDLFPAAPLRALGYTHIIIHGQKG 64 Query: 65 YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124 Y+GVAI S+ E D + + +R+ N Y+P G Sbjct: 65 YHGVAIASRIPLTEDHRQDYCGVGDARHISAIFERG--NRRVRLHNFYVPAGGDEPDRTI 122 Query: 125 DDKISWIKRFLRFASQRLELEEPLI---FAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + K F+ E GD NI P HD ++ T + Sbjct: 123 NPKFGHKLDFIEEMKLLKANGEANTSAILVGDLNIAPLEHDVWSHKQLLKIVSHTPVETE 182 Query: 182 SFQKLQNMGFTDAIRATH--DTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHS 238 ++ G + H + LY++W Y A W ++G R+DHI S + L Sbjct: 183 GLLEVMKRGAWLDLMRQHVPASEKLYTWWSYRAKDWEAADRGRRLDHIWSSSDLGPHLKR 242 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 I + RGW +PSDH PV D Sbjct: 243 IEILKEARGWDRPSDHVPVTAHFD 266 >gi|15836769|ref|NP_297457.1| exodeoxyribonuclease [Xylella fastidiosa 9a5c] gi|9104958|gb|AAF82977.1|AE003870_3 exodeoxyribonuclease [Xylella fastidiosa 9a5c] Length = 266 Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats. Identities = 43/270 (15%), Positives = 83/270 (30%), Gaps = 18/270 (6%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + ++++N N +R+ + W + D++C+QETK + + YH+ Sbjct: 1 MRISSFNANGLRSALSKGFFDWFSTQDIDVLCVQETKAQRQQLVGPDFFPAGYHVCFRDA 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 + G + ++ Y E + + Sbjct: 61 TTKKGYSGVAIYSRCEPDELRTTLGWAEFDEEGRYVEARFGNLSVV--SFYIPSGSSGEQ 118 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + K ++ + L + GD+NI+ D N + ++ R Sbjct: 119 RQHYKFEVMRWLRPILCEWLLSGRDYVLCGDWNIVRSALDIRNWKSNQKNSGCLPLERDW 178 Query: 183 FQKLQNMG-----------FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 L + D R + Y++W + N G RID+ +SP Sbjct: 179 LNGLCADSLHEVNAAQGRGWVDTYRVLYPQGEDYTWWSNRGAARVNNVGWRIDYQFVSPG 238 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + I + R SDH P V Sbjct: 239 LRERVSRCAIYREQR----FSDHAPYTVEY 264 >gi|315104061|gb|EFT76037.1| exodeoxyribonuclease III [Propionibacterium acnes HL050PA2] Length = 297 Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats. Identities = 59/297 (19%), Positives = 107/297 (36%), Gaps = 37/297 (12%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +A++N+N IRA + + W++ + D+I LQE + + P + Sbjct: 1 MRIASFNINGIRAALKRGFSEWMEARDCDVIGLQEVRCRPADLPEGAFGDRHVSWAPGSL 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDL------------------------DVQARFIEAT 98 NG+A+L++ P E+ + + Sbjct: 61 AGRNGLALLTRTAPAEVRSWGTHLVMTPGQAPTPAQVLTGNTNGLPTELLPFADEGRYIE 120 Query: 99 FTINTQTLRIGNLYLPHGNPITS----------TKYDDKISWIKRFLRFASQRLELEEPL 148 + L + LYLP G K + +R + Sbjct: 121 VDLADTPLTVACLYLPKGATPDPANEKAIAKQDRKMAFLAGFRDHLVRRRQECTAQGRHF 180 Query: 149 IFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL--QNMGFTDAIRATHDTHHLYS 206 + GD+NI + D N +++ F E RQ F + + DT+ YS Sbjct: 181 LVMGDFNIAHENADLKNWKANQHNEGFLPEERQWFDTILSPDTLIDVVRAQHPDTNGPYS 240 Query: 207 FWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +W + ++ + G RID+ + SPE S ++ ID P + SDH V++ D+ Sbjct: 241 WWSWRGKAFVNDAGWRIDYHLASPELASKAITSEIDRDPSYSERTSDHAAVVIDYDL 297 >gi|297157838|gb|ADI07550.1| putative exodeoxyribonuclease III [Streptomyces bingchenggensis BCW-1] Length = 265 Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats. Identities = 51/264 (19%), Positives = 92/264 (34%), Gaps = 6/264 (2%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++TV T NVN +RA W+ D++CLQE + E + +H Sbjct: 1 MLTVTTVNVNGLRAAAKKGFLPWLGGTAADVVCLQEVRAEPGELTAPVREPDGWHTVHAP 60 Query: 62 --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 K GVA+ ++ +P + + D R++E T + G Sbjct: 61 ADTKGRAGVAVYTRREPEGVRVGFGSAEFDGSGRYLEVDLPGVTVA-SLYLPSGEVGTER 119 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K ++ + ++ GD+NI + D N + F E Sbjct: 120 QEEKERFMGEFLPYLKELRERAAAGGREVLVCGDWNIAHREADIKNWKANRKKSGFLPEE 179 Query: 180 RQSFQKLQNMGFTDAIRA--THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 R ++ + + D YS+W Y ++ + G RID ++ + Sbjct: 180 RAWLSRVYDEAAYVDVVRKLHPDAEGPYSWWSYRGRAFDNDAGWRIDLLVGTQGLAERAV 239 Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261 A+++ + SDH PV Sbjct: 240 KAQVERAASYDQRWSDHAPVTAVF 263 >gi|317374848|sp|A0MTA1|APEX1_DANRE RecName: Full=DNA-(apurinic or apyrimidinic site) lyase; AltName: Full=APEX nuclease; Short=APEN; AltName: Full=Apurinic-apyrimidinic endonuclease 1; Short=AP endonuclease 1; Short=zAP1 gi|117549778|gb|ABK35081.1| apurinic/apyrimidinic endonuclease 1 [Danio rerio] gi|117549788|gb|ABK35082.1| apurinic/apyrimidinic endonuclease 1 [Danio rerio] gi|117549790|gb|ABK35083.1| apurinic/apyrimidinic endonuclease 1 [Danio rerio] gi|117549792|gb|ABK35084.1| apurinic/apyrimidinic endonuclease 1 [Danio rerio] Length = 310 Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats. Identities = 75/262 (28%), Positives = 124/262 (47%), Gaps = 16/262 (6%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQ----SLNYHIE 58 + + +WNV+ +RA + N W+++ +PDI+CLQETK +K P + Y Sbjct: 55 MKITSWNVDGLRAWVKKNGLDWVRKEDPDILCLQETKCAEKALPADITGMPEYPHKYWAG 114 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + ++ Y+GVA+L K +P+ + + ++ D + R I A F Sbjct: 115 SEDKEGYSGVAMLCKTEPLNVTYGIGKEEHDKEGRVITAEFPDF-----FLVTAYVPNAS 169 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + D + +W F + L+ +PL+ GD N+ Q D NP +A FT E Sbjct: 170 RGLVRLDYRKTWDVDFRAY-LCGLDARKPLVLCGDLNVAHQEIDLKNPKGNRKNAGFTPE 228 Query: 179 VRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 R+ F +L GFTD+ R + + Y+FW Y ++ SKN G R+D+ +LS L Sbjct: 229 EREGFTQLLEAGFTDSFRELYPDQAYAYTFWTYMMNARSKNVGWRLDYFVLSSALLPGLC 288 Query: 238 SARIDTKPRGWTKPSDHTPVIV 259 ++I G SDH P+ + Sbjct: 289 DSKIRNTAMG----SDHCPITL 306 >gi|55962497|emb|CAI11781.1| novel protein (zgc:66204) [Danio rerio] Length = 310 Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats. Identities = 75/262 (28%), Positives = 124/262 (47%), Gaps = 16/262 (6%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQ----SLNYHIE 58 + + +WNV+ +RA + N W+++ +PDI+CLQETK +K P + Y Sbjct: 55 MKITSWNVDGLRAWVKKNGLDWVRKEDPDILCLQETKCAEKALPADITGMPEYPHKYWAG 114 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + ++ Y+GVA+L K +P+ + + ++ D + R I A F Sbjct: 115 SEDKEGYSGVAMLCKTEPLNVTYGIGKEEHDKEGRVITAEFPDF-----FLVTAYVPNAS 169 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + D + +W F + L+ +PL+ GD N+ Q D NP +A FT E Sbjct: 170 RGLVRLDYRKTWDVDFRAY-LCGLDARKPLVLCGDLNVAHQEIDLKNPKGNRKNAGFTPE 228 Query: 179 VRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 R+ F +L GFTD+ R + + Y+FW Y ++ SKN G R+D+ +LS L Sbjct: 229 EREGFTQLLEAGFTDSFRELYPDQAYAYTFWTYMMNARSKNVGWRLDYFVLSSALLPGLC 288 Query: 238 SARIDTKPRGWTKPSDHTPVIV 259 ++I G SDH P+ + Sbjct: 289 DSKIRNTAMG----SDHCPITL 306 >gi|149922823|ref|ZP_01911246.1| exodeoxyribonuclease III [Plesiocystis pacifica SIR-1] gi|149816290|gb|EDM75794.1| exodeoxyribonuclease III [Plesiocystis pacifica SIR-1] Length = 280 Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats. Identities = 60/263 (22%), Positives = 105/263 (39%), Gaps = 11/263 (4%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC-- 60 +TV +WN+N +RA AW+ E DI+ +QE + + T + +H Sbjct: 18 LTVLSWNINGLRAAAKKGFGAWLAECGGDIVGVQEIRAFKEQLDDATAEPEGWHSHFRSA 77 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPI 119 + Y+GV + S+ ++ L D + R A F + + +G Sbjct: 78 VRPGYSGVGLYSRAPADKVEVELGEARFDDEGRVQLARFGRLFVANVYF---PNGNGRDR 134 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 +++ K+ + + ++ ++ GD+N + D P + F E Sbjct: 135 DNSRVPYKLDFYRAVFELVERKRRGGYRVLVMGDFNTAHEAIDLARPKQNVKTSGFLPEE 194 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R+ + G+ D R+ YS+W + +N G RID+++ SP L A Sbjct: 195 REELDRWIRAGWIDTFRSLEPGPGHYSWWSQRGTARERNVGWRIDYVLASPNVEPFLREA 254 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 I + G SDH PV V LD Sbjct: 255 FIWPEVPG----SDHCPVGVRLD 273 >gi|116254288|ref|YP_770126.1| exodeoxyribonuclease III [Rhizobium leguminosarum bv. viciae 3841] gi|115258936|emb|CAK10045.1| putative exodeoxyribonuclease III [Rhizobium leguminosarum bv. viciae 3841] Length = 267 Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats. Identities = 75/264 (28%), Positives = 112/264 (42%), Gaps = 9/264 (3%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64 + TWN+NS+R R+ + + ++ PDI+CLQETK + FP L+++ Y HI GQK Sbjct: 5 ITTWNINSVRLRMPIVEQLVLKHRPDILCLQETKVTNDLFPAAPLRAMGYNHIIIHGQKG 64 Query: 65 YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124 Y+GVAI S+ E D + + +R+ N Y+P G Sbjct: 65 YHGVAIASRIPLAEDHRQDYCGVGDARHISAIFEHG--NRRVRLHNFYVPAGGDEPDRTI 122 Query: 125 DDKISWIKRFLRFASQRLELEEPLI---FAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + K F+ E GD NI P HD ++ T + Sbjct: 123 NPKFGHKLDFIEEMKLLKANGEANTSAILVGDLNIAPLEHDVWSHKQLLKIVSHTPVETE 182 Query: 182 SFQKLQNMGFTDAIRATH--DTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHS 238 ++ G + H + LY++W Y A W ++G R+DHI S + L Sbjct: 183 GLLEVMKRGAWLDLMRQHVPENEKLYTWWSYRAKDWEAADRGRRLDHIWSSSDLGPHLKR 242 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 I + RGW +PSDH PV D Sbjct: 243 IEILKEARGWDRPSDHVPVTAHFD 266 >gi|118470089|ref|YP_886033.1| exodeoxyribonuclease III [Mycobacterium smegmatis str. MC2 155] gi|118171376|gb|ABK72272.1| exodeoxyribonuclease III [Mycobacterium smegmatis str. MC2 155] Length = 273 Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats. Identities = 71/271 (26%), Positives = 117/271 (43%), Gaps = 17/271 (6%) Query: 3 VVTVATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKNF--PFETLQSL 53 +TV T NVN RA + AW+K+ D+IC+QET+ ED FET + Sbjct: 6 TLTVTTINVNGARAACKERSTENLGMLAWLKQTRADVICMQETRCEDDQLAATFETAFAD 65 Query: 54 NYHIETCGQKS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 +H+ + + NGVA+LS+ +I ++ D R+IE + + ++ Sbjct: 66 GWHLASAPSERKGRNGVAVLSRTPFDDIRIGCGAEEFDTHGRWIEVDTAG----ITVVSV 121 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 Y+P G T + + + R A + + + GD+NI +D N Sbjct: 122 YVPTGEAETERQLEKERFMAGVSKRMAQLQAG-DREALVCGDWNIGHTENDIKNWKGNVK 180 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230 + F E R L G+ DA+R H D YS+W + ++ + G RID+ +++P Sbjct: 181 KSGFLPEERAWVSGLLASGWVDAVRQLHGDVPGPYSWWSWRGKAFDNDAGWRIDYHLVTP 240 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 L + + + SDH PV V Sbjct: 241 GLAGRLVAGGTERPEAYALRWSDHAPVTVEF 271 >gi|257457966|ref|ZP_05623125.1| exodeoxyribonuclease III [Treponema vincentii ATCC 35580] gi|257444679|gb|EEV19763.1| exodeoxyribonuclease III [Treponema vincentii ATCC 35580] Length = 258 Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats. Identities = 57/260 (21%), Positives = 91/260 (35%), Gaps = 5/260 (1%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + +V +WNVN IRA W+ +PD++CLQETK + P E + Sbjct: 1 MTSVISWNVNGIRAAQKKGFLEWLYTESPDVLCLQETKARKEQLPSELITPAWKEGTYKT 60 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 S L +++ A E + + Sbjct: 61 YWQAAKKPGYSGTAVFCKKEPLNIRTMNLPAFDDEGRVLVADFDTVSVISAYFPNSQEGG 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + K+ + L F + + ++ GDYNI +P D NP E + + E R Sbjct: 121 ARLGYKLDFCAAMLEFCNALQKDGRHIVLCGDYNIAHKPIDLANPKSNEQNPGYLPEERA 180 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 G+ D R H Y++W Y + KN G RID+ + + + I Sbjct: 181 WMDTFTQAGYIDTFRHFCAEPHRYTWWSYRFHAREKNIGWRIDYHCVDNAFLPNIRESSI 240 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 G SDH P+ + Sbjct: 241 MADVLG----SDHCPIKLVY 256 >gi|308233639|ref|ZP_07664376.1| exodeoxyribonuclease III Xth [Atopobium vaginae DSM 15829] gi|328944401|ref|ZP_08241863.1| exodeoxyribonuclease III [Atopobium vaginae DSM 15829] gi|327490985|gb|EGF22762.1| exodeoxyribonuclease III [Atopobium vaginae DSM 15829] Length = 259 Score = 169 bits (427), Expect = 4e-40, Method: Composition-based stats. Identities = 69/263 (26%), Positives = 111/263 (42%), Gaps = 15/263 (5%) Query: 5 TVATWNVNSIRARIHN---LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 +WNVN +RA + N DI +QETK + + L Sbjct: 8 RFVSWNVNGLRATLKKEPSFLEIFSTLNADIFAIQETKLQAGQVDLD-LDGYTQTWSYAE 66 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G A+ S+ +P+ + + D + R F ++Y P+ + Sbjct: 67 RKGYSGTAVFSREKPLSTIHTIGCKAADNEGRVCALEFE----KFWFVDVYTPNSKNELA 122 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + + R L+ ++P+I GD+N+ Q D NP +A F+ E R Sbjct: 123 RLDER--MEWDKAYREFLVGLDAQKPVITCGDFNVAHQEIDLKNPASNHENAGFSDEERA 180 Query: 182 SFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 F L GFTD R+ H T YS+W Y S +N G RID+ ++S + + S+ Sbjct: 181 GFSSLLGAGFTDTFRSAHPTLEGAYSWWSYRMRSRERNAGWRIDYFLVSNRIANTVTSSA 240 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263 I + G SDH PV + L++ Sbjct: 241 IYNEIYG----SDHCPVGLELEL 259 >gi|331699058|ref|YP_004335297.1| exodeoxyribonuclease III Xth [Pseudonocardia dioxanivorans CB1190] gi|326953747|gb|AEA27444.1| exodeoxyribonuclease III Xth [Pseudonocardia dioxanivorans CB1190] Length = 268 Score = 169 bits (427), Expect = 4e-40, Method: Composition-based stats. Identities = 60/267 (22%), Positives = 107/267 (40%), Gaps = 9/267 (3%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETL---QSLNYH-- 56 ++TV++ NVN IRA L AW+ + D++CLQET+ ++ P E L + + Sbjct: 1 MLTVSSVNVNGIRAAAPKGLTAWLAATDADVVCLQETRARHEDLPDELLGVLERAGWLLT 60 Query: 57 -IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + + GV +L++ P + + + R++E T + Sbjct: 61 LAPSDAAQGRAGVGVLTRVAPEAVRVGIDAAEGAAAGRYVEVDLPGLTVA-SLYLPNGTV 119 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 G P K ++ + + ++ GD+NI D N ++ F Sbjct: 120 GTPRQDEKDRFLAAFAPYLAERREKAAAEDREVVVCGDWNIAHTEADIRNWRGNVRNSGF 179 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 R +L G+ D +R+ H YS+W Y ++ + G RID + + + Sbjct: 180 LPHERAWLGELYGSGWVDVVRSLHPGVDGPYSWWSYRGRAFDNDTGWRIDLHVATAGLAA 239 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261 SA ++ P + SDH PV V Sbjct: 240 RASSAVVERAPSHAERWSDHAPVTVRY 266 >gi|300743782|ref|ZP_07072802.1| exodeoxyribonuclease III [Rothia dentocariosa M567] gi|300380143|gb|EFJ76706.1| exodeoxyribonuclease III [Rothia dentocariosa M567] Length = 275 Score = 169 bits (427), Expect = 4e-40, Method: Composition-based stats. Identities = 67/274 (24%), Positives = 112/274 (40%), Gaps = 17/274 (6%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC-- 60 + VA+ NVN IRA ++A W+ + DI+CLQE + DK E L +++I Sbjct: 1 MRVASVNVNGIRAAYRKDMATWLAGRDVDILCLQEVRAPDK-IVRELLNEDDWNILHAEA 59 Query: 61 -----------GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 +K N L K QP+ + + D R++EA +T+ T Sbjct: 60 AAKGRAGVLVATRKHPNANGELLKNQPVATRSTIGEDYFADAGRWVEADYTLPTGETLTV 119 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 H + + + DDK ++ R L + + + ++ GD N+ D N Sbjct: 120 VSAYVHSGEVGTPRQDDKYRFLDRMLVRLPELAQHSDHVLIVGDLNVGHTELDIKNWKAN 179 Query: 170 ENDACFTLEVRQSFQKLQNM--GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227 + A F E R F K A + + Y++W Y ++ + G RID+ M Sbjct: 180 QKRAGFLPEERAYFDKFFGEIGYEDVARKLAGEVPGPYTWWSYRGKAFDNDAGWRIDYHM 239 Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +P + A +D + SDH P++V Sbjct: 240 ATPALAAKAVEATVDRAASYDERFSDHAPLVVDY 273 >gi|311113023|ref|YP_003984245.1| exodeoxyribonuclease III [Rothia dentocariosa ATCC 17931] gi|310944517|gb|ADP40811.1| exodeoxyribonuclease III [Rothia dentocariosa ATCC 17931] Length = 282 Score = 169 bits (427), Expect = 4e-40, Method: Composition-based stats. Identities = 67/276 (24%), Positives = 112/276 (40%), Gaps = 17/276 (6%) Query: 2 SVVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 + VA+ NVN IRA ++A W+ + DI+CLQE + DK E L +++I Sbjct: 6 KTLRVASVNVNGIRAAYRKDMATWLAGRDVDILCLQEVRAPDK-IVRELLNEDDWNILHA 64 Query: 61 -------------GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107 +K N L K QP+ + + D R++EA +T+ T Sbjct: 65 EAAAKGRAGVLVATRKHPNANGELLKNQPVATRSTIGEDYFADAGRWVEADYTLPTGETL 124 Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167 H + + + DDK ++ R L + + + ++ GD N+ D N Sbjct: 125 TVVSAYVHSGEVGTPRQDDKYRFLDRMLVRLPELAQHSDHVLIVGDLNVGHTELDIKNWK 184 Query: 168 IWENDACFTLEVRQSFQKLQNM--GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225 + A F E R F K A + + Y++W Y ++ + G RID+ Sbjct: 185 ANQKRAGFLPEERAYFDKFFGEIGYEDVARKLAGEVPGPYTWWSYRGKAFDNDAGWRIDY 244 Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 M +P + A +D + SDH P++V Sbjct: 245 HMATPALAAKAVEATVDRAASYDERFSDHAPLVVDY 280 >gi|108798182|ref|YP_638379.1| exodeoxyribonuclease III (xth) [Mycobacterium sp. MCS] gi|119867278|ref|YP_937230.1| exodeoxyribonuclease III Xth [Mycobacterium sp. KMS] gi|108768601|gb|ABG07323.1| exodeoxyribonuclease III (xth) [Mycobacterium sp. MCS] gi|119693367|gb|ABL90440.1| exodeoxyribonuclease III Xth [Mycobacterium sp. KMS] Length = 263 Score = 169 bits (427), Expect = 4e-40, Method: Composition-based stats. Identities = 65/270 (24%), Positives = 108/270 (40%), Gaps = 20/270 (7%) Query: 4 VTVATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKNFPFETLQSL--N 54 + V+T NVN IRA + L AW+KE + D++CLQET+ +D +L Sbjct: 1 MIVSTINVNGIRAAVKQRSTENLGLLAWLKETSADVVCLQETRADDDQLADALAPALADG 60 Query: 55 YH--IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 +H + K NGVA+LS++ E + + T + ++ + Sbjct: 61 WHLASASPHLKGRNGVAVLSRHAVTEHRRMESEEFGEHGRYLEVDTGGLTVASVYVQTGE 120 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 + ++ ++ +R + GD+NI +D N Sbjct: 121 AETDRQLEKERFMAALAMRMAEIR--------GTDAVVCGDWNIAHTENDIKNWKGNVKK 172 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 + F RQ L G+ D +RA H YS+W + ++ + G RID+ + SP Sbjct: 173 SGFLPSERQWLTDLLGTGWVDVVRALHPDVAGPYSWWSWRGRAFDNDAGWRIDYQLASPS 232 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 H AR++ + SDH PV V Sbjct: 233 LAPRAHIARVERADAYALRWSDHAPVTVEY 262 >gi|126433840|ref|YP_001069531.1| exodeoxyribonuclease III Xth [Mycobacterium sp. JLS] gi|126233640|gb|ABN97040.1| exodeoxyribonuclease III Xth [Mycobacterium sp. JLS] Length = 263 Score = 169 bits (427), Expect = 5e-40, Method: Composition-based stats. Identities = 66/270 (24%), Positives = 108/270 (40%), Gaps = 20/270 (7%) Query: 4 VTVATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKNFPFETLQSL--N 54 + V+T NVN IRA + L AW+KE + D++CLQET+ +D +L Sbjct: 1 MIVSTINVNGIRAAVKQRSTENLGLLAWLKETSADVVCLQETRADDDQLADALAPALADG 60 Query: 55 YH--IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 +H + K NGVA+LS++ E + D T + ++ + Sbjct: 61 WHLASASPHLKGRNGVAVLSRHAVTEHRRMESEEFGDHGRYLEVDTGGLTVASVYVQTGE 120 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 + ++ ++ +R + GD+NI +D N Sbjct: 121 AETDRQLEKERFMAALATRMAEIR--------GTDAVVCGDWNIAHTENDIKNWKGNVKK 172 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 + F RQ L G+ D +RA H YS+W + ++ + G RID+ + SP Sbjct: 173 SGFLPSERQWLTDLLGTGWVDVVRALHPDVAGPYSWWSWRGRAFDNDAGWRIDYQLASPS 232 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 H AR++ + SDH PV V Sbjct: 233 LAPRAHIARVERADAYALRWSDHAPVTVEY 262 >gi|74316272|ref|YP_314012.1| DNA-(apurinic or apyrimidinic site) lyase [Thiobacillus denitrificans ATCC 25259] gi|74055767|gb|AAZ96207.1| DNA-(apurinic or apyrimidinic site) lyase [Thiobacillus denitrificans ATCC 25259] Length = 259 Score = 169 bits (427), Expect = 5e-40, Method: Composition-based stats. Identities = 67/265 (25%), Positives = 117/265 (44%), Gaps = 15/265 (5%) Query: 4 VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETC 60 + + + N+N IR A W+ D++C+QE K + + E Q Sbjct: 1 MRIISANLNGIRSAATKGFFDWLPTQGADVVCVQELKAQATDLKPEVRQCDGLSGAFHCA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GV + ++ P IV L + D + R+IEA + L + +LY P G+ Sbjct: 61 EKKGYSGVGVYTRQAPQRIVEGLGLPEFDAEGRYIEADYG----DLAVISLYQPSGSSSE 116 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K ++ F + ++ +I GD+NI Q D N + ++ F E R Sbjct: 117 ERQQA-KFRFLDAFFPHLEKLVKCGREIIICGDWNIAHQEIDLKNWKSNQKNSGFLPEER 175 Query: 181 QSFQK-LQNMGFTDAIRATHDTH--HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 + +G+ D R+ + H Y++W +W+KN G RID+ + +P + Sbjct: 176 AWMTRLFDELGWVDVYRSLYPAHTGEAYTWWSNRGQAWAKNVGWRIDYQIATPGIAAKAR 235 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLD 262 SA + + R SDH P++V D Sbjct: 236 SAFVYKEQR----FSDHAPLVVDYD 256 >gi|332179140|gb|AEE14829.1| exodeoxyribonuclease III Xth [Thermodesulfobium narugense DSM 14796] Length = 254 Score = 169 bits (427), Expect = 5e-40, Method: Composition-based stats. Identities = 75/261 (28%), Positives = 130/261 (49%), Gaps = 10/261 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + T+NVNSIR+R + I+++NP+II LQE K FP Y G+K Sbjct: 1 MIITTFNVNSIRSRTDIVNLLIEKHNPEIIALQEIKCTPDLFPNLAFPD--YKCLVSGEK 58 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 SYNGVA+ +K ++ F++ + N+Y PHG+ + K Sbjct: 59 SYNGVAVCTKLDSSHFENEFQDTVNQKRSLFVKFEN------FILMNIYFPHGDLRGTDK 112 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+ + K+ L F + +P+I GD+N+ D Y+P I ++ E R++ Sbjct: 113 FYYKLDFYKKLLAFLKENFTPNDPIIMLGDFNVALTDFDVYDPQILKDTIGTMPEERKAL 172 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 ++L N GF D R H +++++Y KNKG+RID+I+++ + + + +D Sbjct: 173 RELLNYGFIDTYRHLHPNDPGFTWFNYIGGDIWKNKGMRIDYILVTKPLINKVKNVEVDL 232 Query: 244 KPRGW--TKPSDHTPVIVSLD 262 R KPSDH P+++ ++ Sbjct: 233 SLRKRRTPKPSDHAPLVMEIN 253 >gi|254420582|ref|ZP_05034306.1| exodeoxyribonuclease III (xth) subfamily [Brevundimonas sp. BAL3] gi|196186759|gb|EDX81735.1| exodeoxyribonuclease III (xth) subfamily [Brevundimonas sp. BAL3] Length = 265 Score = 169 bits (427), Expect = 5e-40, Method: Composition-based stats. Identities = 79/270 (29%), Positives = 117/270 (43%), Gaps = 15/270 (5%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCG 61 + +ATWN+NS+R RI +A ++ E PD++ LQE K FP + + H+ G Sbjct: 2 TLRLATWNINSVRLRIDQVARFVAERAPDVLLLQEIKCTTDQFPRAAFEDMGMPHLRVAG 61 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 QK ++GVAI S+ + T V + + + N Y+P G + Sbjct: 62 QKGWHGVAIASRLPLEDSDT------FQVCKLGHARCVSAQVAGIDVQNFYIPAGGDVPD 115 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLI---FAGDYNIIPQPHDCYNPIIWENDACFTL- 177 + K F + + ++ AGD+NI P D +N T Sbjct: 116 RTLNPKFDHKMDFYEQLTAIVARQDKSRPLVMAGDFNIAPGEGDVFNHRYMSKIVSHTPI 175 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLY-SFWDYYADSWSK-NKGIRIDHIMLSPEATSL 235 EV + GF D +R S+W Y A + K N+G+R+DHI SP T Sbjct: 176 EVETLNRLQATGGFADVLRDRFPEPQKLASWWSYRAADFRKSNRGLRLDHIWTSPGLTPA 235 Query: 236 LHS--ARIDTKPRGWTKPSDHTPVIVSLDI 263 + ARI R W +PSDH PV V LD+ Sbjct: 236 VAKDTARIHDDVREWDRPSDHAPVTVDLDV 265 >gi|325294131|ref|YP_004279995.1| exodeoxyribonuclease III [Agrobacterium sp. H13-3] gi|325061984|gb|ADY65675.1| exodeoxyribonuclease III [Agrobacterium sp. H13-3] Length = 267 Score = 169 bits (427), Expect = 5e-40, Method: Composition-based stats. Identities = 76/263 (28%), Positives = 112/263 (42%), Gaps = 9/263 (3%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64 + TWN+NS+R R+ + ++ PDI+CLQETK + FP + L++L Y H+ GQK Sbjct: 5 ITTWNINSVRLRMPIVEQFLVRYKPDILCLQETKCPNGEFPMKPLKALGYEHVIIHGQKG 64 Query: 65 YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124 Y+GVAI SK E AR I A F + ++ +R+ N Y+P G Sbjct: 65 YHGVAIASKIPLTEDHR--QDYCGIGDARHISAIFQVGSRRIRLHNFYVPAGGDEPDRSI 122 Query: 125 DDKISWIKRFLRFASQRL---ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR- 180 + K F+ I GD NI P +D ++ T Sbjct: 123 NPKFGHKLDFIEEMKALRADGVPGTSSILVGDLNIAPLENDVWSHKQLLKIVSHTPVETD 182 Query: 181 -QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHS 238 + D+ +Y++W Y A W ++G R+DHI S + L Sbjct: 183 GMLDIMKKGNWLDLMRLNVPDSEKIYTWWSYRAKDWEAADRGRRLDHIWSSQDLGPSLEK 242 Query: 239 ARIDTKPRGWTKPSDHTPVIVSL 261 I + RGW +PSDH PV Sbjct: 243 IDILREARGWNRPSDHVPVTAHF 265 >gi|77464426|ref|YP_353930.1| exodeoxyribonuclease III [Rhodobacter sphaeroides 2.4.1] gi|221640316|ref|YP_002526578.1| Exodeoxyribonuclease III Xth [Rhodobacter sphaeroides KD131] gi|77388844|gb|ABA80029.1| Exodeoxyribonuclease III [Rhodobacter sphaeroides 2.4.1] gi|221161097|gb|ACM02077.1| Exodeoxyribonuclease III Xth [Rhodobacter sphaeroides KD131] Length = 262 Score = 169 bits (427), Expect = 5e-40, Method: Composition-based stats. Identities = 73/265 (27%), Positives = 109/265 (41%), Gaps = 8/265 (3%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 T+ATWN+NS+R R ++ + E PDI+CLQE K+ + P E ++L YH Sbjct: 2 TFTLATWNINSVRLREALVSRLLTEEMPDILCLQECKSPVEKMPLEAFRALGYHWCVARG 61 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 + + P+ GD + I N Y+P G I Sbjct: 62 QKSYNGVAILSKLPLVD----AGDHDFADLGHARHVSAALENGVTIHNCYVPAGGDIPDR 117 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL-EV 179 + + K +L + P GD NI P+ D +N T EV Sbjct: 118 EQNVKFGQKLDYLTRMRDWCRADTPKKAILVGDLNIAPREDDVWNHKSLLKIVSHTPIEV 177 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHS 238 ++ + D R LYS+W Y + W +KG R+DHI +P+ + H Sbjct: 178 DHLNALMEAGAWIDVTRKDLPEGRLYSWWSYRSPDWEAADKGRRLDHIWATPDIVNAAHG 237 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263 +RI RGW +PSDH PV + D+ Sbjct: 238 SRILKAARGWLQPSDHAPVFATFDL 262 >gi|254498808|ref|ZP_05111519.1| exodeoxyribonuclease III [Legionella drancourtii LLAP12] gi|254351972|gb|EET10796.1| exodeoxyribonuclease III [Legionella drancourtii LLAP12] Length = 260 Score = 169 bits (427), Expect = 5e-40, Method: Composition-based stats. Identities = 67/264 (25%), Positives = 118/264 (44%), Gaps = 14/264 (5%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNF-PFETLQSLNYHI--ET 59 + V ++N N IRA W+ + D +C+QETK + + P E +Y + Sbjct: 1 MKVISFNANGIRAAARNGFYEWLVAQDADFVCIQETKAQPEQLLPEEMYYPRDYFCDYYS 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GVAI ++++P IV + D D + R+I+ + + Sbjct: 61 AQKKGYSGVAIYARHKPTRIVKGIGYDYCDNEGRYIQFDYPKLSVI-----SLYLPSGTS 115 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-E 178 + + K ++++F + Q LI GDYNI + D N + ++ F E Sbjct: 116 GDGRQEVKYDFLEQFAKHLIQLKNEGRELIICGDYNIAHKQIDLKNWRSNQKNSGFLPDE 175 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 + +MGF DA R + Y++W Y + +W KN G RID+ +++P + + Sbjct: 176 RAWMDKLFGSMGFVDAFRVHNQEEEQYTWWSYRSRAWEKNVGWRIDYQVITPGLSEHVID 235 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 +RI + R SDH P ++ Sbjct: 236 SRIFREAR----LSDHAPFMIEYK 255 >gi|209551337|ref|YP_002283254.1| exodeoxyribonuclease III Xth [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537093|gb|ACI57028.1| exodeoxyribonuclease III Xth [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 267 Score = 169 bits (427), Expect = 5e-40, Method: Composition-based stats. Identities = 73/264 (27%), Positives = 110/264 (41%), Gaps = 9/264 (3%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64 + TWN+NS+R R+ + + ++ PDI+CLQETK ++ FP L+++ Y HI GQK Sbjct: 5 ITTWNINSVRLRMPIVEQLVLKHRPDILCLQETKVTNELFPAAPLRAMGYDHIIIHGQKG 64 Query: 65 YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124 Y+GVAI S+ E D + + +R+ N Y+P G Sbjct: 65 YHGVAIASRIPLTEDHRQDYCGVGDARHISAIFEHG--NRRIRLHNFYVPAGGDEPDRTI 122 Query: 125 DDKISWIKRFLRFASQRLELEEPLI---FAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + K F+ E GD NI P HD ++ T Sbjct: 123 NPKFGHKLDFIEEMKLLKANGEANTSAILVGDLNIAPLEHDVWSHKQLLKIVSHTPVETD 182 Query: 182 --SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHS 238 + + ++ LY++W Y A W ++G R+DHI S + L Sbjct: 183 GLLEVMKRGNWLDLMRQHVPESEKLYTWWSYRAKDWEAADRGRRLDHIWSSSDLGPHLKR 242 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 I + RGW +PSDH PV D Sbjct: 243 IEILKEARGWDRPSDHVPVTAHFD 266 >gi|114800092|ref|YP_762220.1| putative exodeoxyribonuclease III [Hyphomonas neptunium ATCC 15444] gi|114740266|gb|ABI78391.1| putative exodeoxyribonuclease III [Hyphomonas neptunium ATCC 15444] Length = 269 Score = 169 bits (427), Expect = 5e-40, Method: Composition-based stats. Identities = 64/266 (24%), Positives = 114/266 (42%), Gaps = 9/266 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN--YHIETCG 61 + + TWN+NS+R R N+ A++ PD++CLQETK +D FP + + + Y + Sbjct: 5 IKITTWNINSVRLRAPNVEAFVAAEKPDVVCLQETKCQDAEFPLKAFKDMGLPYLVIRGQ 64 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 + + GVAI S+ ++ + + + + + +P + Sbjct: 65 RGGHAGVAIASRLPLEQVDVPDLCRENHARVIAARLPSGLEVHNIYLPAG-GDTPDPDAN 123 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 K+ K+ ++ R +L+ + GD N+ P +D ++ T + + Sbjct: 124 DKFAHKLDFLDRLGPGYK-KLKKGVKRVLVGDLNVAPHENDVWSHKQLLGIVSHTPQETE 182 Query: 182 S--FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATS--LL 236 + A A + LY++W Y A W + N+G R+DHI + A + Sbjct: 183 RLEDSRKSAGFEDIARLAVPEEQKLYTWWSYRAADWAASNRGRRLDHIWANKAAMEDVKV 242 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLD 262 S RI R KPSDH PV ++L Sbjct: 243 SSYRIHPAWRSGWKPSDHAPVSLTLK 268 >gi|169630763|ref|YP_001704412.1| putative exodeoxyribonuclease [Mycobacterium abscessus ATCC 19977] gi|169242730|emb|CAM63758.1| Putative exodeoxyribonuclease [Mycobacterium abscessus] Length = 273 Score = 169 bits (427), Expect = 5e-40, Method: Composition-based stats. Identities = 60/273 (21%), Positives = 104/273 (38%), Gaps = 13/273 (4%) Query: 1 MS--VVTVATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51 MS +TV T NVN IRA + L W+++ + DI+CLQE + E+ Sbjct: 1 MSAQKITVTTINVNGIRAAVKERSAENRGLLPWLEQTSSDIVCLQEVRAEEDQLREALAP 60 Query: 52 SL--NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 +L + + + + + T + D + L + Sbjct: 61 ALAAGWQVVSAASSVKGRSGVGILSRVPAASTRVALDADGGEFDESGRYLEAEIGDLTVA 120 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 ++YLP G + + ++K ++ + + GD+NI D Sbjct: 121 SIYLPTGE-AGTARQEEKERFMAAVGARMAVLAASGRDTVICGDWNIGHTERDIKAWKAN 179 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIML 228 + A F E R L G+ D+ R H YS+W + ++ + G RID+ + Sbjct: 180 QKKAGFLPEERAWVGSLLEAGWVDSFRLLHPDVDGPYSWWSWRGKAFDNDAGWRIDYHLA 239 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + + HSAR++ + SDH PV V Sbjct: 240 TADLGRRAHSARVERADAYALRWSDHAPVTVEY 272 >gi|190893818|ref|YP_001980360.1| exodeoxyribonuclease III protein [Rhizobium etli CIAT 652] gi|190699097|gb|ACE93182.1| exodeoxyribonuclease III protein [Rhizobium etli CIAT 652] Length = 267 Score = 168 bits (426), Expect = 6e-40, Method: Composition-based stats. Identities = 76/265 (28%), Positives = 113/265 (42%), Gaps = 9/265 (3%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64 V TWN+NS+R R+ + + ++ PDI+CLQETK ++ FP L+++ Y HI GQK Sbjct: 5 VTTWNINSVRLRMPIVEQLVLKHRPDILCLQETKVPNELFPAAPLRAMGYDHIIIHGQKG 64 Query: 65 YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124 Y+GVAI S+ E D + + +R+ N Y+P G Sbjct: 65 YHGVAIASRIPLTEDHRQDYCGVGDARHISAIFERG--NRRIRLHNFYVPAGGDEPDRTI 122 Query: 125 DDKISWIKRFLRFASQRLELEEPLI---FAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + K F+ E GD NI P HD ++ T Sbjct: 123 NPKFGHKLDFIEEMKLLKANGEANTSAILVGDLNIAPLEHDVWSHKQLLKIVSHTPVETD 182 Query: 182 SFQKLQNMGFTDAIRATH--DTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHS 238 ++ G + H + LY++W Y A W ++G R+DHI S + L Sbjct: 183 GLLEVMRRGAWLDLMRQHVPASEKLYTWWSYRAKDWEAADRGRRLDHIWSSSDLGPHLKR 242 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263 I + RGW +PSDH PV D+ Sbjct: 243 IEILKEARGWDRPSDHVPVTAHFDL 267 >gi|319441976|ref|ZP_07991132.1| exodeoxyribonuclease III [Corynebacterium variabile DSM 44702] Length = 293 Score = 168 bits (426), Expect = 6e-40, Method: Composition-based stats. Identities = 64/289 (22%), Positives = 112/289 (38%), Gaps = 30/289 (10%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ +AT NVN IRA W+ + D+I +QE + + P + + + +ET Sbjct: 1 MLRIATANVNGIRAAQRRGFGDWLDARDCDVIAVQEVRAQPDKIPEDAFGNYHVALETGN 60 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDL--------DVQARFIEATFTINTQTLRIGNLYL 113 NGVA+L+K P+ + T G D + + + + LYL Sbjct: 61 IPGRNGVAVLTKTPPVAVRTWSDGSDRVPLPRKLRPFIPQGRYIEVDLADAPVTVACLYL 120 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLEL------------------EEPLIFAGDYN 155 P G + +++ +++ + GD N Sbjct: 121 PKGGLPAEMQRPERMREAPDGGARYERKMGFLAGFGRYLTATRRAALAEGREFLLMGDMN 180 Query: 156 IIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA--THDTHHLYSFWDYYAD 213 I HD + ++ F E R+ F + + + D YS+W + Sbjct: 181 IAHTRHDLTHWRRNQSHDGFLPEEREWFDRQLSPRTLVDVVRSLHPDEDGPYSWWSWAGQ 240 Query: 214 SWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 S++K+ G RID+ + +P SA +D RG + SDH+PV+V D Sbjct: 241 SFAKDAGWRIDYHLATPRLARTATSAGVDRDFRGM-RLSDHSPVVVDYD 288 >gi|269119015|ref|YP_003307192.1| exodeoxyribonuclease III Xth [Sebaldella termitidis ATCC 33386] gi|268612893|gb|ACZ07261.1| exodeoxyribonuclease III Xth [Sebaldella termitidis ATCC 33386] Length = 255 Score = 168 bits (426), Expect = 6e-40, Method: Composition-based stats. Identities = 66/264 (25%), Positives = 111/264 (42%), Gaps = 15/264 (5%) Query: 4 VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59 + + +WNVN IRA + +E P+I+C+QETK + + E L Y E+ Sbjct: 1 MRIYSWNVNGIRALYNKGEFFKLFEEE-PEIVCIQETKAQAEQLSEELLNINGYSSFFES 59 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GVA+ SK +P+ + I + Sbjct: 60 ADKKGYSGVAVYSKKKPLMVKKFDIERFDSEGRYIELEYEDF------ILINCYFPNSQE 113 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + D KI + L + +R + + +I GDYNI +P D P E + + E Sbjct: 114 KGKRLDYKIDFCDEILNYLEERKKSGKAVIITGDYNIAHKPIDLARPKDNEENPGYLPEE 173 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R+ K G+ D+ R + Y++W Y + KN G RID+ ++ E+ +L + Sbjct: 174 REWMTKFIEAGYVDSFRKFYPEEVKYTWWSYRTRAREKNIGWRIDYFCINKESEGILIDS 233 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 I G SDH P+ + + + Sbjct: 234 GIRNDVFG----SDHCPIYIDISV 253 >gi|288917707|ref|ZP_06412070.1| exodeoxyribonuclease III Xth [Frankia sp. EUN1f] gi|288350922|gb|EFC85136.1| exodeoxyribonuclease III Xth [Frankia sp. EUN1f] Length = 263 Score = 168 bits (426), Expect = 6e-40, Method: Composition-based stats. Identities = 57/264 (21%), Positives = 108/264 (40%), Gaps = 4/264 (1%) Query: 3 VVTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ VAT NVN IRA R + W+++ PDI+C+QE + +D + E Sbjct: 1 MLRVATVNVNGIRAARRRGMGTWLEDRRPDILCVQEVRADDAILADAVGPGWHIVHEASA 60 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 K GVA+LS+ P+++ L + + + + L + ++Y+ G + Sbjct: 61 AKGRAGVAVLSRAAPVDVRLGLGDFTGSGRWVEADFSLDGDPGLLTVVSVYVHTGE-ADT 119 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 ++K ++ ++ ++ GD NI + D N A F + R Sbjct: 120 PLQEEKYRFLAAIRERMAKLAADGRHVLVCGDLNICHREIDLKNWKGNLKKAGFLPQERA 179 Query: 182 S--FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + + Y++W + ++ + G RID+++ + + L SA Sbjct: 180 WLDQLFTDDGFVDLVRNFAGEQPGPYTWWSWRGRAYDTDAGWRIDYLISTGQLAERLLSA 239 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 +D P + SDH PV D+ Sbjct: 240 AVDRAPAYDQRWSDHAPVYTDFDV 263 >gi|126463266|ref|YP_001044380.1| exodeoxyribonuclease III Xth [Rhodobacter sphaeroides ATCC 17029] gi|126104930|gb|ABN77608.1| exodeoxyribonuclease III Xth [Rhodobacter sphaeroides ATCC 17029] Length = 262 Score = 168 bits (426), Expect = 6e-40, Method: Composition-based stats. Identities = 73/265 (27%), Positives = 110/265 (41%), Gaps = 8/265 (3%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 T+ATWN+NS+R R ++ + E PDI+CLQE K+ + P E ++L YH Sbjct: 2 TFTLATWNINSVRLREALVSRLLTEEMPDILCLQECKSPVEKMPLEAFRALGYHWCVARG 61 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 + + P+ GD + I N Y+P G I Sbjct: 62 QKSYNGVAILSKLPLVD----AGDHDFADLGHARHVSAALENGVTIHNCYVPAGGDIPDR 117 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL-EV 179 + + K +L + P GD NI P+ D +N T EV Sbjct: 118 EQNVKFGQKLDYLTRMRDWCRADTPKKAILVGDLNIAPREDDVWNHKSLLKIVSHTPIEV 177 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHS 238 +++ + D R LYS+W Y + W +KG R+DHI +P+ + H Sbjct: 178 DHLNALMESGAWIDVTRKDLPEGRLYSWWSYRSPDWEAADKGRRLDHIWATPDIVNAAHG 237 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263 +RI RGW +PSDH PV + D+ Sbjct: 238 SRILKAARGWLQPSDHAPVFATFDL 262 >gi|327190170|gb|EGE57275.1| exodeoxyribonuclease III protein [Rhizobium etli CNPAF512] Length = 267 Score = 168 bits (426), Expect = 6e-40, Method: Composition-based stats. Identities = 77/265 (29%), Positives = 114/265 (43%), Gaps = 9/265 (3%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64 V TWN+NS+R R+ + + ++ PDI+CLQETK ++ FP L+++ Y HI GQK Sbjct: 5 VTTWNINSVRLRMPIVEQLVLKHRPDILCLQETKVPNELFPAAPLRAMGYDHIIIHGQKG 64 Query: 65 YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124 Y+GVAI S+ IE D + + +R+ N Y+P G Sbjct: 65 YHGVAIASRIPLIEDHRQDYCGVGDARHISAIFERG--NRRIRLHNFYVPAGGDEPDRTI 122 Query: 125 DDKISWIKRFLRFASQRLELEEPLI---FAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + K F+ E GD NI P HD ++ T Sbjct: 123 NPKFGHKLDFIEEMKLLKANGEANTSAILVGDLNIAPLEHDVWSHKQLLKIVSHTPVETD 182 Query: 182 SFQKLQNMGFTDAIRATH--DTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHS 238 ++ G + H + LY++W Y A W ++G R+DHI S + L Sbjct: 183 GLLEVMRRGAWLDLMRQHVPASEKLYTWWSYRAKDWEAADRGRRLDHIWSSSDLGPHLKR 242 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263 I + RGW +PSDH PV D+ Sbjct: 243 IEILKEARGWDRPSDHVPVTAHFDL 267 >gi|156362086|ref|XP_001625612.1| predicted protein [Nematostella vectensis] gi|156212454|gb|EDO33512.1| predicted protein [Nematostella vectensis] Length = 257 Score = 168 bits (426), Expect = 6e-40, Method: Composition-based stats. Identities = 71/265 (26%), Positives = 121/265 (45%), Gaps = 13/265 (4%) Query: 2 SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFET-LQSLNYHIET 59 S + +WNVN +RA + N +++ + +PD+ C+QETK + P E L + + + Sbjct: 3 SNFKITSWNVNGLRAWLKNNSKSFVSKEDPDVFCIQETKCALADIPKEAKLAGYHCYWNS 62 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 QK Y+GV + SK +PI++ + + D + R I A + + + G + Sbjct: 63 AEQKGYSGVGLCSKKEPIKVSYGMGNKEHDKEGRVITAEYEDFH---LVTSYVPNSGRGL 119 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 Y + + ++L+ +P+I GD N+ + D NP A FT E Sbjct: 120 PRLGYRQQW---NKDFLSYLKKLDEIKPVILCGDLNVAHKDIDLANPKTNTRTAGFTKEE 176 Query: 180 RQSFQKLQNMGFTDAIRATHDTHH-LYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R F L GF D R + Y+FW Y + +KN G R+D+ ++S + Sbjct: 177 RADFTTLLGEGFKDTFRELYPDKKSAYTFWSYMGGARAKNVGWRLDYFVVSDRLVPKVCD 236 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263 + I ++ G SDH P+ + L I Sbjct: 237 SIIRSRVMG----SDHCPLSLLLSI 257 >gi|312797575|ref|YP_004030497.1| Exodeoxyribonuclease III [Burkholderia rhizoxinica HKI 454] gi|312169350|emb|CBW76353.1| Exodeoxyribonuclease III (EC 3.1.11.2) [Burkholderia rhizoxinica HKI 454] Length = 262 Score = 168 bits (426), Expect = 6e-40, Method: Composition-based stats. Identities = 62/264 (23%), Positives = 107/264 (40%), Gaps = 14/264 (5%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59 ++ V T N+N IR+ W E N DI+C+QE K + E L + + + Sbjct: 1 MLRVITANLNGIRSATKKGFFDWFGEQNADIVCVQEIKCSQDDMTPEFLAPHGFTGYFQH 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G I ++++P E + D + R++E + + + + G Sbjct: 61 AQKKGYSGAGIYTRHEPDEFIAGFGSKAFDHEGRYVELRYG-DLSLVSVYVPSGSSGEER 119 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + KY L E +IF GD NI+ + D N + ++ E Sbjct: 120 QAVKYRF-----MDDFYAHLDALRREREVIFCGDINIVHKEIDIKNWKSNQKNSGCLPEE 174 Query: 180 RQSFQKLQN-MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R K+ + +G+ D RA Y++W +++KN G RID+ + + S Sbjct: 175 RAWLSKVFDKLGYVDVFRALDPRPEQYTWWSNRGQAYAKNVGWRIDYQIATAGIASTARR 234 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 I K SDH P+ + D Sbjct: 235 TSIFRDI----KFSDHAPLTIDYD 254 >gi|149193831|ref|ZP_01870929.1| exodeoxyribonuclease III (xthA) [Caminibacter mediatlanticus TB-2] gi|149135784|gb|EDM24262.1| exodeoxyribonuclease III (xthA) [Caminibacter mediatlanticus TB-2] Length = 252 Score = 168 bits (426), Expect = 6e-40, Method: Composition-based stats. Identities = 72/262 (27%), Positives = 127/262 (48%), Gaps = 12/262 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + T+NVNSIR+R+ + +K+ N D++C+QE K E++ FP + ++ GQK Sbjct: 1 MKICTFNVNSIRSRLEIIQNLVKDYNIDVLCMQEIKVENEKFP---IIDGDFECIIHGQK 57 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +GVA SKY G+ + + + + I N+Y P G+ Sbjct: 58 RLHGVATCSKYPIEGYQKGFDGELNEPRFIY------TLINVIHIINIYAPLGDSYGDR- 110 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 ++ K+ + + + + ++ ++ GD+NI D ++ IWE + E R Sbjct: 111 FEYKMYFYDKLFEWLKRFDLNKDKVLICGDFNISHTSLDVWDEEIWEGEVTHLPEERAIL 170 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 K ++GF D IR + +++F+DY + KN+G+R+D+I++S S I T Sbjct: 171 SKFLDIGFIDIIREVYKDEKVFTFYDYRGAAVYKNEGLRLDYILVSKPLFSKFKKVDILT 230 Query: 244 KPRGWTK--PSDHTPVIVSLDI 263 R K PSDH P+I D+ Sbjct: 231 SIRRKRKPTPSDHVPIIAEFDV 252 >gi|85710025|ref|ZP_01041090.1| exonuclease III [Erythrobacter sp. NAP1] gi|85688735|gb|EAQ28739.1| exonuclease III [Erythrobacter sp. NAP1] Length = 262 Score = 168 bits (426), Expect = 6e-40, Method: Composition-based stats. Identities = 82/266 (30%), Positives = 128/266 (48%), Gaps = 9/266 (3%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCG 61 +++VATWN+NS R R+ + ++K PD++CLQE K E FP E L + Y H G Sbjct: 1 MLSVATWNINSARLRLPIIEKYLKAEAPDVLCLQEIKCESHLFPAEALAEMGYEHQAISG 60 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 QK Y+GVA +S+ EI H D + + + I N+Y+P G I Sbjct: 61 QKGYHGVATVSRVPIREISRH----DWQDNGEARHVGVEVVGKDMLIENVYVPAGGDIPD 116 Query: 122 TKYDDKISWIKRFLRFASQRLEL-EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + + K FL ++ + ++P + GD+NI P D ++ T Sbjct: 117 REKNVKFGQKLDFLGRMTKWADKVDKPTLIVGDFNIAPLESDVWSHKQLLKVVSHTPIEV 176 Query: 181 QSFQKLQNMGFTDAIRATH--DTHHLYSFWDYYADSWSKN-KGIRIDHIMLSPEATSLLH 237 ++ Q+ ++ I H D YS+W Y + W KN +G R+DH+ SPE + Sbjct: 177 ETLQRFKDAHGWVDIGREHIRDPERYYSWWSYRSPDWRKNDRGRRLDHMWASPELAAQAK 236 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263 + R+ + R W KPSDH P++ DI Sbjct: 237 AHRLLEEARSWEKPSDHIPLVTEFDI 262 >gi|171915906|ref|ZP_02931376.1| exodeoxyribonuclease III [Verrucomicrobium spinosum DSM 4136] Length = 250 Score = 168 bits (426), Expect = 7e-40, Method: Composition-based stats. Identities = 68/257 (26%), Positives = 103/257 (40%), Gaps = 11/257 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN IRA + L ++ + D+ICLQE K ++ E + + Sbjct: 1 MKLVSWNVNGIRACMDKGLREYLTACDADVICLQEVKAMEEQAGLEWFKDYQVVWNAAQK 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AIL++ + D+ D + R I F Sbjct: 61 KGYSGTAILTRQPIKSHAIGMGIDEHDKEGRVITVEFPD-----YYVVNVYTPNAQAELA 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + ++ W F + LE +P++ GD N+ D P F+ + R S Sbjct: 116 RLPYRLLWDDAFRLYLKN-LEQTKPVLACGDLNVAHNEIDIARPKENRFSPGFSDQERAS 174 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F KL GF D R H YS+W Y A++ N G RID+ + S L S+ I Sbjct: 175 FGKLLESGFVDTFRHFDSRPHQYSWWSYRANARGNNVGWRIDYWLASQGLKDGLKSSIIR 234 Query: 243 TKPRGWTKPSDHTPVIV 259 G SDH PV + Sbjct: 235 PDIHG----SDHCPVEL 247 >gi|258405188|ref|YP_003197930.1| exodeoxyribonuclease III [Desulfohalobium retbaense DSM 5692] gi|257797415|gb|ACV68352.1| exodeoxyribonuclease III [Desulfohalobium retbaense DSM 5692] Length = 255 Score = 168 bits (426), Expect = 7e-40, Method: Composition-based stats. Identities = 64/260 (24%), Positives = 101/260 (38%), Gaps = 8/260 (3%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN RA + W + + D+ICLQETK P E Q +N H Sbjct: 1 MRLYSWNVNGFRAVVQKGFWDWFAQCDGDVICLQETKATLDQVP-EKHQHVNTHQIIWNG 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 + H D+Q + T + + + N+Y P+G Sbjct: 60 ATVKKGYSGVACFARTPPVHWSRGLPDMQYQGEGRTLLLEYRDFYLLNIYFPNGQMSQER 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 D ++ L +P+I GD N D NP + + F E R Sbjct: 120 L--DYKMGFYDAFFDYAEHLRQTKPVIVCGDLNTAHTEIDLKNPKANADRSGFLPEERAW 177 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 + G+ D R YS+W Y ++ ++N G RID+ +S E T + +A I+ Sbjct: 178 IDTFISHGYHDTFRMFTSEGGHYSWWTYRFNARARNAGWRIDYFFVSDELTGRVRNAWIE 237 Query: 243 TKPRGWTKPSDHTPVIVSLD 262 G SDH P+ + +D Sbjct: 238 DTVYG----SDHCPIGLEID 253 >gi|289424786|ref|ZP_06426568.1| exodeoxyribonuclease III [Propionibacterium acnes SK187] gi|289427574|ref|ZP_06429286.1| exodeoxyribonuclease III [Propionibacterium acnes J165] gi|295131421|ref|YP_003582084.1| exodeoxyribonuclease III [Propionibacterium acnes SK137] gi|289154749|gb|EFD03432.1| exodeoxyribonuclease III [Propionibacterium acnes SK187] gi|289159065|gb|EFD07257.1| exodeoxyribonuclease III [Propionibacterium acnes J165] gi|291377273|gb|ADE01128.1| exodeoxyribonuclease III [Propionibacterium acnes SK137] gi|313763084|gb|EFS34448.1| exodeoxyribonuclease III [Propionibacterium acnes HL013PA1] gi|313773022|gb|EFS38988.1| exodeoxyribonuclease III [Propionibacterium acnes HL074PA1] gi|313802417|gb|EFS43642.1| exodeoxyribonuclease III [Propionibacterium acnes HL110PA2] gi|313807850|gb|EFS46334.1| exodeoxyribonuclease III [Propionibacterium acnes HL087PA2] gi|313812037|gb|EFS49751.1| exodeoxyribonuclease III [Propionibacterium acnes HL083PA1] gi|313812136|gb|EFS49850.1| exodeoxyribonuclease III [Propionibacterium acnes HL025PA1] gi|313819198|gb|EFS56912.1| exodeoxyribonuclease III [Propionibacterium acnes HL046PA2] gi|313819763|gb|EFS57477.1| exodeoxyribonuclease III [Propionibacterium acnes HL036PA1] gi|313823880|gb|EFS61594.1| exodeoxyribonuclease III [Propionibacterium acnes HL036PA2] gi|313827241|gb|EFS64955.1| exodeoxyribonuclease III [Propionibacterium acnes HL063PA1] gi|313828429|gb|EFS66143.1| exodeoxyribonuclease III [Propionibacterium acnes HL063PA2] gi|313831114|gb|EFS68828.1| exodeoxyribonuclease III [Propionibacterium acnes HL007PA1] gi|313833483|gb|EFS71197.1| exodeoxyribonuclease III [Propionibacterium acnes HL056PA1] gi|313838117|gb|EFS75831.1| exodeoxyribonuclease III [Propionibacterium acnes HL086PA1] gi|314914557|gb|EFS78388.1| exodeoxyribonuclease III [Propionibacterium acnes HL005PA4] gi|314919199|gb|EFS83030.1| exodeoxyribonuclease III [Propionibacterium acnes HL050PA1] gi|314920633|gb|EFS84464.1| exodeoxyribonuclease III [Propionibacterium acnes HL050PA3] gi|314925728|gb|EFS89559.1| exodeoxyribonuclease III [Propionibacterium acnes HL036PA3] gi|314931457|gb|EFS95288.1| exodeoxyribonuclease III [Propionibacterium acnes HL067PA1] gi|314957017|gb|EFT01123.1| exodeoxyribonuclease III [Propionibacterium acnes HL027PA1] gi|314957831|gb|EFT01934.1| exodeoxyribonuclease III [Propionibacterium acnes HL002PA1] gi|314960672|gb|EFT04773.1| exodeoxyribonuclease III [Propionibacterium acnes HL002PA2] gi|314963372|gb|EFT07472.1| exodeoxyribonuclease III [Propionibacterium acnes HL082PA1] gi|314969733|gb|EFT13831.1| exodeoxyribonuclease III [Propionibacterium acnes HL037PA1] gi|314974296|gb|EFT18392.1| exodeoxyribonuclease III [Propionibacterium acnes HL053PA1] gi|314976933|gb|EFT21028.1| exodeoxyribonuclease III [Propionibacterium acnes HL045PA1] gi|314979892|gb|EFT23986.1| exodeoxyribonuclease III [Propionibacterium acnes HL072PA2] gi|314985810|gb|EFT29902.1| exodeoxyribonuclease III [Propionibacterium acnes HL005PA1] gi|314988407|gb|EFT32498.1| exodeoxyribonuclease III [Propionibacterium acnes HL005PA2] gi|314988831|gb|EFT32922.1| exodeoxyribonuclease III [Propionibacterium acnes HL005PA3] gi|315079798|gb|EFT51774.1| exodeoxyribonuclease III [Propionibacterium acnes HL078PA1] gi|315084894|gb|EFT56870.1| exodeoxyribonuclease III [Propionibacterium acnes HL027PA2] gi|315087238|gb|EFT59214.1| exodeoxyribonuclease III [Propionibacterium acnes HL002PA3] gi|315088971|gb|EFT60947.1| exodeoxyribonuclease III [Propionibacterium acnes HL072PA1] gi|315096818|gb|EFT68794.1| exodeoxyribonuclease III [Propionibacterium acnes HL038PA1] gi|315100579|gb|EFT72555.1| exodeoxyribonuclease III [Propionibacterium acnes HL046PA1] gi|315109351|gb|EFT81327.1| exodeoxyribonuclease III [Propionibacterium acnes HL030PA2] gi|327325640|gb|EGE67438.1| exodeoxyribonuclease III [Propionibacterium acnes HL096PA2] gi|327328234|gb|EGE70001.1| exodeoxyribonuclease III [Propionibacterium acnes HL096PA3] gi|327445310|gb|EGE91964.1| exodeoxyribonuclease III [Propionibacterium acnes HL043PA1] gi|327446951|gb|EGE93605.1| exodeoxyribonuclease III [Propionibacterium acnes HL043PA2] gi|327449053|gb|EGE95707.1| exodeoxyribonuclease III [Propionibacterium acnes HL013PA2] gi|327452601|gb|EGE99255.1| exodeoxyribonuclease III [Propionibacterium acnes HL087PA3] gi|327457644|gb|EGF04299.1| exodeoxyribonuclease III [Propionibacterium acnes HL083PA2] gi|328751915|gb|EGF65531.1| exodeoxyribonuclease III [Propionibacterium acnes HL087PA1] gi|328756939|gb|EGF70555.1| exodeoxyribonuclease III [Propionibacterium acnes HL020PA1] gi|328759048|gb|EGF72664.1| exodeoxyribonuclease III [Propionibacterium acnes HL025PA2] gi|328762251|gb|EGF75743.1| exodeoxyribonuclease III [Propionibacterium acnes HL099PA1] Length = 297 Score = 168 bits (426), Expect = 7e-40, Method: Composition-based stats. Identities = 61/297 (20%), Positives = 105/297 (35%), Gaps = 37/297 (12%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +A++N+N IRA + + ++ + D+I LQE + + P + Sbjct: 1 MRIASFNINGIRAALKRGFSERMEARDCDVIGLQEVRCRPADLPEGAFGDRHVSWAPGSL 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDL------------------------DVQARFIEAT 98 NGVA+L++ P E+ + + Sbjct: 61 AGRNGVALLTRTAPAEVRSWGTHLVMAPGQAPTPAQALTGNTDGLPTELLPFADEGRYIE 120 Query: 99 FTINTQTLRIGNLYLPHGNPITS----------TKYDDKISWIKRFLRFASQRLELEEPL 148 + L + LYLP G K + +R + Sbjct: 121 VDLADTPLTVACLYLPKGATPDPANEKTIAKQDRKMAFLTGFRDHLVRRRQECTTQGRHF 180 Query: 149 IFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL--QNMGFTDAIRATHDTHHLYS 206 + GD+NI + D N + + F E RQ F + + DT+ YS Sbjct: 181 LVMGDFNIAHENADLKNWKANQRNEGFLPEERQWFDTILSPDTLIDVVRAQHPDTNGPYS 240 Query: 207 FWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +W + ++ + G RID+ + SPE S +A ID P + SDH V+V D+ Sbjct: 241 WWSWRGKAFVNDAGWRIDYHLASPELASKAITAEIDRDPSYSERTSDHAAVVVDYDL 297 >gi|103488148|ref|YP_617709.1| exodeoxyribonuclease III (xth) [Sphingopyxis alaskensis RB2256] gi|98978225|gb|ABF54376.1| exodeoxyribonuclease III (xth) [Sphingopyxis alaskensis RB2256] Length = 264 Score = 168 bits (426), Expect = 7e-40, Method: Composition-based stats. Identities = 75/267 (28%), Positives = 122/267 (45%), Gaps = 11/267 (4%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIET 59 M+ ++A+WN+NS+RARI + +++E PDI+CLQETK E FP ++L Y HI T Sbjct: 1 MTRTSIASWNINSVRARIGIVEKFLREEAPDILCLQETKVECGLFPKAMFEALGYGHIVT 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 GQ+ ++GVAI+S+ E+ + +R+ N+Y+P G I Sbjct: 61 HGQRMHHGVAIVSRLPLAEVRKYD-----WQANGEARHIGVTLPSGVRLDNVYIPAGGDI 115 Query: 120 TSTKYDDKISWIKRFLRFASQRLE--LEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + + K FL + P + GD+N+ P D +N + T Sbjct: 116 PDREINPKFGQKLDFLARMTDWSGGLNGTPTVLTGDFNVAPLASDVWNHKALLDVVSHTP 175 Query: 178 EVRQ--SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATS 234 + + + + LY++W Y A W N+G R+DH+ ++P+ Sbjct: 176 IEVETLARLQAASDWVDLGRHFIAAPAPLYTWWSYRAKDWEASNRGRRLDHMWVTPDLKD 235 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261 + RI R W +PSDH P+I Sbjct: 236 KAVAHRIVQPARSWERPSDHVPLITEF 262 >gi|54293631|ref|YP_126046.1| hypothetical protein lpl0684 [Legionella pneumophila str. Lens] gi|54296671|ref|YP_123040.1| hypothetical protein lpp0702 [Legionella pneumophila str. Paris] gi|148360699|ref|YP_001251906.1| exodeoxyribonuclease III [Legionella pneumophila str. Corby] gi|296106236|ref|YP_003617936.1| exodeoxyribonuclease III [Legionella pneumophila 2300/99 Alcoy] gi|53750456|emb|CAH11850.1| hypothetical protein lpp0702 [Legionella pneumophila str. Paris] gi|53753463|emb|CAH14918.1| hypothetical protein lpl0684 [Legionella pneumophila str. Lens] gi|148282472|gb|ABQ56560.1| exodeoxyribonuclease III [Legionella pneumophila str. Corby] gi|158512141|gb|ABW69102.1| exodeoxyribonuclease III [Legionella pneumophila] gi|295648137|gb|ADG23984.1| exodeoxyribonuclease III [Legionella pneumophila 2300/99 Alcoy] gi|307609445|emb|CBW98939.1| hypothetical protein LPW_07241 [Legionella pneumophila 130b] Length = 260 Score = 168 bits (426), Expect = 7e-40, Method: Composition-based stats. Identities = 74/264 (28%), Positives = 124/264 (46%), Gaps = 14/264 (5%) Query: 4 VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKN-FPFETLQSLNYHIETCG 61 + V ++N N IR+ + W+ + D +C+QETK++ + P E +Y + Sbjct: 1 MKVISFNANGIRSSARNGFYDWLVGQDVDFVCIQETKSQVEQLIPEELYFPRDYFCDYFD 60 Query: 62 --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GVAI SKY+P+ IV L D D + R+I+ + + Sbjct: 61 AEKKGYSGVAIYSKYKPVRIVKGLGFDYCDKEGRYIQFDYPKLSVI-----SLYLPSGTS 115 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + + K +++++F R LI GDYNI + D N + ++ F E Sbjct: 116 GEDRQEVKYAFLEQFARHLMNLKNEGRELIICGDYNIAHKKIDLKNWRGNQKNSGFLPEE 175 Query: 180 RQSFQKLQ-NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R +L +MGF DA R + Y++W Y A +W KN G RID+ +++P T + Sbjct: 176 RAWMDELFGSMGFVDAFRVHNQEEEQYTWWSYRARAWEKNVGWRIDYQVITPGLTEYVAD 235 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 +RI + R SDH P+++ Sbjct: 236 SRIFREAR----FSDHAPLMIEYK 255 >gi|319778623|ref|YP_004129536.1| Exodeoxyribonuclease III [Taylorella equigenitalis MCE9] gi|317108647|gb|ADU91393.1| Exodeoxyribonuclease III [Taylorella equigenitalis MCE9] Length = 266 Score = 168 bits (425), Expect = 7e-40, Method: Composition-based stats. Identities = 54/265 (20%), Positives = 99/265 (37%), Gaps = 9/265 (3%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ + + NVN +R+ + W+ PDI+CLQE K ++ L Y E Sbjct: 1 MLRITSLNVNGLRSAFNKGIVQWLSICKPDIVCLQEIKISAEDLTDSLRSPLIYKSEFNH 60 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 + + + + + + ++ + L + + YLP G+ Sbjct: 61 AERKGYSGVGIYLREELDSAYFKHGIENKEFDPEGRVLSVYFKNLTVVSAYLPSGSSGDE 120 Query: 122 TK---YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + + S+ +E + GD+N+ + D N ++ FT E Sbjct: 121 RQRAKFRFLDSFGPWIDAMMRDHVETGHEYVICGDWNMAHKEIDLKNWKSNLKNSGFTPE 180 Query: 179 VRQSFQKLQNMG-FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 R+ L F D R Y++W +W+KN G RID+ + +P +L Sbjct: 181 EREWMNDLLERRGFVDVFRRLCMEADQYTWWSNRGQAWAKNVGWRIDYQIATPGIATLAK 240 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLD 262 A I R SDH P+ + + Sbjct: 241 HAEIYKGQR----FSDHAPLTIDYE 261 >gi|289207257|ref|YP_003459323.1| exodeoxyribonuclease III Xth [Thioalkalivibrio sp. K90mix] gi|288942888|gb|ADC70587.1| exodeoxyribonuclease III Xth [Thioalkalivibrio sp. K90mix] Length = 257 Score = 168 bits (425), Expect = 8e-40, Method: Composition-based stats. Identities = 70/263 (26%), Positives = 117/263 (44%), Gaps = 13/263 (4%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + + N N IRA W+ + D++C+QETK + E YH Sbjct: 1 MRILSMNANGIRAAARKGFFDWLPKTEADVVCIQETKAQIHQIQGEPFHPPGYHSAYVDA 60 Query: 62 -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + Y+GVA+ S+ QP E++T + ++ D + R++E F L + +LYLP G+ Sbjct: 61 VKPGYSGVALYSRRQPDEVITRIGFEEADNEGRYVEMRFG----DLSVVSLYLPSGS-SG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + D K ++ F + ++R++ + GD+NI + D N + ++ F E R Sbjct: 116 DHRQDSKWRFLDFFRPWLAERMQDGREWVICGDWNIAHKEIDLRNWKSNQKNSGFLPEER 175 Query: 181 QSFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 L + G D R D Y++W +W+KN G RID+ + +P Sbjct: 176 AWLDHLFDEIGMVDVFRRLDDRPEQYTWWSNRGQAWAKNVGWRIDYQIATPGIAETARDP 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 I T R SDH P + D Sbjct: 236 YIHTDDRY----SDHAPFWIDYD 254 >gi|313835987|gb|EFS73701.1| putative exodeoxyribonuclease III [Propionibacterium acnes HL037PA2] gi|314929662|gb|EFS93493.1| putative exodeoxyribonuclease III [Propionibacterium acnes HL044PA1] gi|314970515|gb|EFT14613.1| putative exodeoxyribonuclease III [Propionibacterium acnes HL037PA3] gi|328906267|gb|EGG26042.1| exodeoxyribonuclease III [Propionibacterium sp. P08] Length = 297 Score = 168 bits (425), Expect = 8e-40, Method: Composition-based stats. Identities = 57/297 (19%), Positives = 101/297 (34%), Gaps = 37/297 (12%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +A++N+N IRA + + W+ + D++ LQE + + P + Sbjct: 1 MRIASFNINGIRAALKRGFSEWMAARDCDVVGLQEVRCRPADLPEGAFGDRHVSWAPGSL 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDL------------------------DVQARFIEAT 98 NGVA+L++ P E+ + + Sbjct: 61 AGRNGVALLTRTAPAEVRSWGTHLVMAPGQTPNLDEVVTGNTDGLPTELLPFAEEGRYIE 120 Query: 99 FTINTQTLRIGNLYLPHGNPITSTK----------YDDKISWIKRFLRFASQRLELEEPL 148 + L + LYLP G T + R + Sbjct: 121 VDLADSLLTVACLYLPKGATPDPTNEKAIAKQDRKMAFLAGFRDHLTRRCQECAAQGRHF 180 Query: 149 IFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL--QNMGFTDAIRATHDTHHLYS 206 + GD+NI + D N +++ F E RQ F + + D + YS Sbjct: 181 LVIGDFNIAHENADLKNWKANQHNEGFLPEERQWFDTIVSPDTLVDVLRAQHPDINGPYS 240 Query: 207 FWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +W + ++ + G RID+ + SPE + ID + SDH V+V D+ Sbjct: 241 WWSWRGKAFINDAGWRIDYHLASPELAKRAVTTEIDRDSSYAERTSDHAAVVVDYDV 297 >gi|42525008|ref|NP_970388.1| exodeoxyribonuclease [Bdellovibrio bacteriovorus HD100] gi|39577219|emb|CAE81042.1| exodeoxyribonuclease [Bdellovibrio bacteriovorus HD100] Length = 257 Score = 168 bits (425), Expect = 8e-40, Method: Composition-based stats. Identities = 68/265 (25%), Positives = 117/265 (44%), Gaps = 15/265 (5%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNF--PFETLQSLNYH--IE 58 + + +WNVN +R+ N W ++ DI+CLQE K D+ E YH Sbjct: 1 MKMISWNVNGLRSVHRKNFREWFEKEKADIVCLQEIKITDEAIKKDEEFYHPAKYHSSWA 60 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + Y+G+A+ SK +P ++ L D++ R++EA F + + N Y P+ + Sbjct: 61 FAEKAGYSGLALYSKKEPDDVRIGLGIPKFDIEGRWLEADFG----PITVVNSYWPN-SQ 115 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 T+ K+ + + + +I GD+NI + D NP +A F E Sbjct: 116 REHTRLPFKLEFCAAAEKRLQALRKKGREVIICGDFNIAHKEIDLRNPKTNMKNAGFLPE 175 Query: 179 VRQSFQKLQN-MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 R + + + + D+ R Y++W Y KN G R+D+ +++ EA+ L Sbjct: 176 ERAWMTRFLDKLEWVDSFRKFEQGPEHYTWWSYRPGVREKNIGWRLDYFLVNKEASDRLK 235 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLD 262 +A G SDH PV ++L Sbjct: 236 AASHCPDVMG----SDHCPVRLTLK 256 >gi|86359550|ref|YP_471442.1| exodeoxyribonuclease III protein [Rhizobium etli CFN 42] gi|86283652|gb|ABC92715.1| exodeoxyribonuclease III protein [Rhizobium etli CFN 42] Length = 267 Score = 168 bits (425), Expect = 9e-40, Method: Composition-based stats. Identities = 79/264 (29%), Positives = 117/264 (44%), Gaps = 9/264 (3%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64 + TWN+NS+R R+ + ++ ++ PDI+CLQETK ++ FP L+++ Y HI GQK Sbjct: 5 ITTWNINSVRLRMPIVEQFVLKHRPDILCLQETKVPNELFPAAPLRAMGYDHIIIHGQKG 64 Query: 65 YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124 Y+GVAI S+ +E AR I A F + +R+ N Y+P G Sbjct: 65 YHGVAIASRIPLMEDHR--QDYCGVGDARHISAVFERGNRRVRLHNFYVPAGGDEPDRTI 122 Query: 125 DDKISWIKRFLRFASQRLELEEPLI---FAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + K F+ E GD NI P HD ++ T Sbjct: 123 NPKFGHKLDFIEEMKLLKANGEANTSAILVGDLNIAPLEHDVWSHKQLLKIVSHTPVETD 182 Query: 182 SFQKLQNMGFTDAIRATH--DTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHS 238 ++ G + H + LY++W Y A W ++G R+DHI S + L Sbjct: 183 GLLEVMKRGAWLDLMRQHVPASEKLYTWWSYRAKDWQAADRGRRLDHIWSSSDLGPHLQR 242 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 I + RGW +PSDH PV D Sbjct: 243 IEILKEARGWDRPSDHVPVTAHFD 266 >gi|302382164|ref|YP_003817987.1| exodeoxyribonuclease III Xth [Brevundimonas subvibrioides ATCC 15264] gi|302192792|gb|ADL00364.1| exodeoxyribonuclease III Xth [Brevundimonas subvibrioides ATCC 15264] Length = 264 Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 78/270 (28%), Positives = 121/270 (44%), Gaps = 15/270 (5%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCG 61 ++ VATWN+NS+R RI +A ++ E+ D++CLQE K + FP + H++ G Sbjct: 1 MLRVATWNINSVRLRIDQVARFVAESGTDVLCLQEIKCLEDQFPRNAFADMGLPHLKIAG 60 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 QK ++GVAI S+ T ++ + I N Y+P G + Sbjct: 61 QKGWHGVAIASRRPIEPSET------FQSCKLGHARCVSVQVAGVDIQNFYIPAGGDVPD 114 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLI---FAGDYNIIPQPHDCYNPIIWENDACFTL- 177 + + K F + + ++ GD+NI P D +N T Sbjct: 115 RELNPKFDHKMDFYEQLTATVAAQDRSRPLLMCGDFNIAPSEFDVWNHRYMSKIVSHTPI 174 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLY-SFWDYYADSWSKN-KGIRIDHIMLSPEATSL 235 EV + FTD +R S+W Y A+ + K+ +G+R+DHI SP T Sbjct: 175 EVETLNRLQVAGAFTDVVREAFPEPQKLASWWSYRAEDFRKSARGLRLDHIWTSPGLTPA 234 Query: 236 LH--SARIDTKPRGWTKPSDHTPVIVSLDI 263 + SA I R WT+PSDH P+ V LD+ Sbjct: 235 VVAGSATIHEPVRAWTQPSDHCPITVDLDV 264 >gi|84515771|ref|ZP_01003132.1| exodeoxyribonuclease III, putative [Loktanella vestfoldensis SKA53] gi|84510213|gb|EAQ06669.1| exodeoxyribonuclease III, putative [Loktanella vestfoldensis SKA53] Length = 262 Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 82/264 (31%), Positives = 116/264 (43%), Gaps = 10/264 (3%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQK 63 T+ATWN+NS+R R + ++E PDI+CLQE K+ P +L Y H+ GQK Sbjct: 4 TLATWNINSVRLREELVLQMLREEQPDILCLQECKSPVDLIPVAQFHALGYTHMVARGQK 63 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 YNGVAI+SK G + + I N Y+P G I Sbjct: 64 GYNGVAIISKLPLQ-----EAGAEDYAALGHARHVAARLENGVTIHNHYVPAGGDIPDRA 118 Query: 124 YDDKISWIKRF--LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180 + K + + + I GD NI P+ D +N T EV Sbjct: 119 VNAKFGNKLDYLTDMRDAYHASRPQKSILVGDLNIAPREDDVWNHKALLKVVSHTPIEVD 178 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHSA 239 Q + G+ D R +LYS+W Y + W +KG R+DH+ +P+ + H + Sbjct: 179 HFGQVMDAGGWVDVTRQDIPQGNLYSWWSYRSPDWDAADKGRRLDHVWATPDISGAAHGS 238 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 R+ RGW KPSDH PV S D+ Sbjct: 239 RVLRHVRGWDKPSDHAPVFASFDL 262 >gi|303328283|ref|ZP_07358721.1| exodeoxyribonuclease III [Desulfovibrio sp. 3_1_syn3] gi|302861613|gb|EFL84549.1| exodeoxyribonuclease III [Desulfovibrio sp. 3_1_syn3] Length = 268 Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 69/275 (25%), Positives = 104/275 (37%), Gaps = 24/275 (8%) Query: 4 VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET-- 59 + + +WNVN +RA W + I+ LQETK + E + Sbjct: 3 IKLVSWNVNGLRALSAKPE-WEWFARTDAQIVALQETKAHPEQLKEELASPEGWEAHWSS 61 Query: 60 -CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN- 117 +K Y+GVA+ S+ P+ + LP + R + F N Y P+G Sbjct: 62 SHVKKGYSGVAVFSRMTPLAVRAELPDPQWQGEGRLLHLEFP----DFHFFNGYFPNGGA 117 Query: 118 --------PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 P K ++ +P++ GD+NI Q D P Sbjct: 118 EELDENGKPTGRFKRVPYKMGFFEAFLNYAEECRKSKPIVVCGDFNIAHQAIDLARPKQN 177 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIML 228 + F E R + MG+ D R H D YS+W Y + KN G RID+ + Sbjct: 178 VKNTGFLPEERAFLDRFTAMGYVDTFRKVHGDQPDQYSWWSYKTRAREKNIGWRIDYFFV 237 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 S E + A I+ G SDH PV + L++ Sbjct: 238 SEELAPAVSDAWIENNVYG----SDHCPVGLELEL 268 >gi|162329921|pdb|2O3C|A Chain A, Crystal Structure Of Zebrafish Ape gi|162329922|pdb|2O3C|B Chain B, Crystal Structure Of Zebrafish Ape gi|162329923|pdb|2O3C|C Chain C, Crystal Structure Of Zebrafish Ape Length = 282 Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 75/262 (28%), Positives = 124/262 (47%), Gaps = 16/262 (6%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQ----SLNYHIE 58 + + +WNV+ +RA + N W+++ +PDI+CLQETK +K P + Y Sbjct: 27 MKITSWNVDGLRAWVKKNGLDWVRKEDPDILCLQETKCAEKALPADITAMPEYPHKYWAG 86 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + ++ Y+GVA+L K +P+ + + ++ D + R I A F Sbjct: 87 SEDKEGYSGVAMLCKTEPLNVTYGIGKEEHDKEGRVITAEFPDF-----FLVTAYVPNAS 141 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + D + +W F + L+ +PL+ GD N+ Q D NP +A FT E Sbjct: 142 RGLVRLDYRKTWDVDFRAY-LCGLDARKPLVLCGDLNVAHQEIDLKNPKGNRKNAGFTPE 200 Query: 179 VRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 R+ F +L GFTD+ R + + Y+FW Y ++ SKN G R+D+ +LS L Sbjct: 201 EREGFTQLLEAGFTDSFRELYPDQAYAYTFWTYMMNARSKNVGWRLDYFVLSSALLPGLC 260 Query: 238 SARIDTKPRGWTKPSDHTPVIV 259 ++I G SDH P+ + Sbjct: 261 DSKIRNTAMG----SDHCPITL 278 >gi|52840885|ref|YP_094684.1| exodeoxyribonuclease III [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52627996|gb|AAU26737.1| exodeoxyribonuclease III [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 260 Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 74/264 (28%), Positives = 124/264 (46%), Gaps = 14/264 (5%) Query: 4 VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKN-FPFETLQSLNYHIETCG 61 + V ++N N IR+ + W+ + D +C+QETK++ + P E +Y + Sbjct: 1 MKVISFNANGIRSSARNGFYDWLVGQDVDFVCIQETKSQVEQLIPEELYFPRDYFCDYFD 60 Query: 62 --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GVAI SKY+P+ IV L D D + R+I+ + + Sbjct: 61 AEKKGYSGVAIYSKYKPMRIVKGLGFDYCDKEGRYIQFDYPKLSV-----VSLYLPSGTS 115 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + + K +++++F R LI GDYNI + D N + ++ F E Sbjct: 116 GDDRQEVKYAFLEQFARHLMNLKNEGRELIICGDYNIAHKKIDLKNWRGNQKNSGFLPEE 175 Query: 180 RQSFQKLQ-NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R +L +MGF DA R + Y++W Y A +W KN G RID+ +++P T + Sbjct: 176 RAWMDELFGSMGFVDAFRVHNQEEEQYTWWSYRARAWEKNVGWRIDYQVITPGLTEYVAD 235 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 +RI + R SDH P+++ Sbjct: 236 SRIFREAR----FSDHAPLMIEYK 255 >gi|226942126|ref|YP_002797200.1| ExoA [Laribacter hongkongensis HLHK9] gi|226717053|gb|ACO76191.1| ExoA [Laribacter hongkongensis HLHK9] Length = 257 Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 58/263 (22%), Positives = 105/263 (39%), Gaps = 13/263 (4%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + + N+N IR+ W+ D++C+QE K + + E + Sbjct: 1 MTRIVSANLNGIRSATQKGFFDWLATTGADVVCVQELKAQLADLKPEHRTPAGFPFAAFH 60 Query: 62 QKS---YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 Y+GV + ++ +P +V L D +D + R++ A F L + +LYLP G+ Sbjct: 61 CAEKKGYSGVGLYARREPDRVVEGLGIDWIDSEGRYLRADFGT----LSVISLYLPSGSS 116 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 K ++ FL ++ GD+NI D N ++ F E Sbjct: 117 SEER-QAVKFRFMDAFLPHLDALRTEGRDIVLCGDWNIAHNEIDLKNWKGNLKNSGFLPE 175 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R G+ D R + Y++W +++K+ G RID+ + + + S Sbjct: 176 ERAWIGARFAEGWADVWRQLYPEAPGYTWWSQRGQAYAKDVGWRIDYQIATAGLAARAQS 235 Query: 239 ARIDTKPRGWTKPSDHTPVIVSL 261 A + R SDH P++V Sbjct: 236 AFVYKDTR----FSDHAPLVVDY 254 >gi|110677459|ref|YP_680466.1| exodeoxyribonuclease III, putative [Roseobacter denitrificans OCh 114] gi|109453575|gb|ABG29780.1| exodeoxyribonuclease III, putative [Roseobacter denitrificans OCh 114] Length = 262 Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 76/261 (29%), Positives = 110/261 (42%), Gaps = 6/261 (2%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64 +ATWN+NS+R R + + E PD++CLQE K+ P E + Y H+ GQK Sbjct: 5 LATWNINSVRLREALVLKLMTEELPDVLCLQECKSPVDKMPLEAFAAAGYGHVVARGQKG 64 Query: 65 YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124 YNGVAILSK E + + + + + K+ Sbjct: 65 YNGVAILSKIPMQEAAAEDFAGLGHARHIAGRLENGVTVHNFYVPAG-GDVADREVNEKF 123 Query: 125 DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVRQSF 183 K+ ++ + + E I GD NI P+ D ++ T EV Sbjct: 124 GQKLDYLTEMRDW--FHAQKPEKSILVGDLNIAPREDDVWDHKKLLKVVSHTPIEVEHLA 181 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHSARID 242 Q G+ D R LYS+W Y A W +KG R+DH+ + + + H +RI Sbjct: 182 QTQDAGGWVDITRQDIPEGRLYSWWSYRAADWDAADKGRRLDHVWATSDIAAAGHDSRIL 241 Query: 243 TKPRGWTKPSDHTPVIVSLDI 263 RGW KPSDH PV D+ Sbjct: 242 RGARGWEKPSDHAPVFAQFDL 262 >gi|163734305|ref|ZP_02141745.1| exodeoxyribonuclease III, putative [Roseobacter litoralis Och 149] gi|161392313|gb|EDQ16642.1| exodeoxyribonuclease III, putative [Roseobacter litoralis Och 149] Length = 262 Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 77/263 (29%), Positives = 113/263 (42%), Gaps = 10/263 (3%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64 +ATWN+NS+R R + + E PD++CLQE K+ P + + Y H+ GQK Sbjct: 5 LATWNINSVRLREGLVLKLMTEEAPDVLCLQECKSPVDKMPLDAFAAAGYAHVVARGQKG 64 Query: 65 YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124 YNGVAILSK E + + + N Y+P G + + Sbjct: 65 YNGVAILSKIPMEEAAAEDFAALGHARHIAGRLENG-----VTVHNFYVPAGGDVADREV 119 Query: 125 DDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL-EVRQ 181 ++K +L ++P GD NI P+ D ++ T EV Sbjct: 120 NEKFGQKLDYLTEMRDWFHTQKPEKSILVGDLNIAPREDDVWDHKKLLKVVSHTPIEVEH 179 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHSAR 240 Q G+ D R L+S+W Y A W +KG R+DH+ + + + H +R Sbjct: 180 LAQTQDAGGWVDITRQDIPEGKLFSWWSYRAADWDAADKGRRLDHVWATSDIAAAGHDSR 239 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263 I RGW KPSDH PV D+ Sbjct: 240 IVRGARGWEKPSDHAPVFAQFDL 262 >gi|157964331|ref|YP_001499155.1| exodeoxyribonuclease III [Rickettsia massiliae MTU5] gi|157844107|gb|ABV84608.1| Exodeoxyribonuclease III [Rickettsia massiliae MTU5] Length = 292 Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 80/271 (29%), Positives = 124/271 (45%), Gaps = 7/271 (2%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETC 60 S++ + TWN+NS+R RI L E+ PDII LQETK D FP E ++++ Y H+ Sbjct: 20 SLMKIVTWNINSLRLRIDLLRKLAYEHQPDIILLQETKVADSLFPLEVIKNIGYEHVIYS 79 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 GQKSYNGVAI+SK+ + + + I I+ + + Sbjct: 80 GQKSYNGVAIISKFPLNNVFSLELYNSDKRHIAAIVNDIEIHNFYV---PAGGDIPDIEV 136 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 +TK+ K+ +++ + + + +I GD NI P HD ++ N T R Sbjct: 137 NTKFKHKLEYVRLMQEWLTTNRTKNDKMIIVGDLNIAPHEHDVWSSKQLRNVISHTDIER 196 Query: 181 QSFQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLLH 237 +LQN + Y++W Y W K NKG R+DHI +S L Sbjct: 197 SLLVELQNVLGFIDSSRHFVSLDTKFYTWWSYRNIDWKKSNKGRRLDHIWVSDNLKDALF 256 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268 S + + R W+ PSDH P V+ ++ + Sbjct: 257 SMHLLPEARDWSPPSDHVPYFVTFNLQMSPR 287 >gi|146329616|ref|YP_001209809.1| exodeoxyribonuclease III [Dichelobacter nodosus VCS1703A] gi|146233086|gb|ABQ14064.1| exodeoxyribonuclease III [Dichelobacter nodosus VCS1703A] Length = 258 Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 64/264 (24%), Positives = 111/264 (42%), Gaps = 13/264 (4%) Query: 1 MSVVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFE--TLQSLNYHI 57 MS + T+N N IRA W+ NPD +C+QETK + + + Sbjct: 1 MS-FKMITFNANGIRAAQRKGFFDWLATQNPDAVCIQETKAQRHQLEDNPVFFPLAHNYY 59 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 +K Y+GVA+ K +P ++ + D+D + R++EA + + H Sbjct: 60 HDAQRKGYSGVALYLKKEPDQVRYGIGWADIDEEGRYLEARYGDLSLI-----SLYMHSG 114 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + + + K S++ R L + + + +I GD NI D N +++ F Sbjct: 115 TSGAHRQEKKESFMVRLLPYLEELAQSGRRVIVCGDINIAHCERDIKNWRGNIHNSGFLP 174 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 RQ L + D R + H Y++W + + N G RID+ ++S + + Sbjct: 175 HERQWLTDLFAGAYKDGFRLKNQNDHEYTWWSQRGKARANNAGWRIDYQIVSNNLAADVL 234 Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261 SA I SDH P+I++ Sbjct: 235 SAEIYRA----QNFSDHAPLILTY 254 >gi|329847403|ref|ZP_08262431.1| exodeoxyribonuclease III [Asticcacaulis biprosthecum C19] gi|328842466|gb|EGF92035.1| exodeoxyribonuclease III [Asticcacaulis biprosthecum C19] Length = 265 Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 81/271 (29%), Positives = 129/271 (47%), Gaps = 17/271 (6%) Query: 4 VTV--ATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETC 60 + + ATWNVNS+R R+ + A++ + DI+CLQE K ++ FP++ ++L + HI Sbjct: 1 MRLSFATWNVNSVRLRMPQIQAFLAQTEIDILCLQEIKCQEHEFPYDAFRALGFEHIHVA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 GQK ++GVAI+SK GD L R I + I N Y+P G + Sbjct: 61 GQKGWHGVAIVSKVPFE------SGDLLPFCRRGEARAQAIRVDNVDIWNFYIPAGGDVP 114 Query: 121 STKYDDKISWIKRFLRFASQRL---ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 +DK F L + PL+ GD NI P D ++ T Sbjct: 115 DRTTNDKFDHKLEFYERLCTHLAQRNRDHPLLICGDLNIAPGEFDVWSHRQMLRVVSHTP 174 Query: 178 -EVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADS-WSKNKGIRIDHIMLSPEATS 234 E+ + F D R + ++++W Y A + N+G+R+DH++L+P + Sbjct: 175 LEIEAFGNFMACGDFHDPFRVAYPEPQKIFTWWSYRASDYRASNRGLRLDHVLLNPALMA 234 Query: 235 LLHS--ARIDTKPRGWTKPSDHTPVIVSLDI 263 + + A+I RGWT+PSDH P V+ +I Sbjct: 235 RVANLTAKIHDDVRGWTQPSDHVPAQVTFEI 265 >gi|320163204|gb|EFW40103.1| APEX nuclease [Capsaspora owczarzaki ATCC 30864] Length = 429 Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 64/261 (24%), Positives = 112/261 (42%), Gaps = 12/261 (4%) Query: 5 TVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFE-TLQSLNYHIETCGQ 62 +A WNVN ++ I +++ PD++C+QETK + P + + + + + Sbjct: 179 KIACWNVNGLKNAIKEGCLQYLEYEKPDVLCIQETKCGEGEIPADSAVPGYYGYWYSAQK 238 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 + Y G + SK QPI + L + D + R I A F + G + + Sbjct: 239 RGYAGTGMYSKTQPIRVSFGLNVPEHDTEGRVITAEFA---DFYLVTAYVPNSGQKLETL 295 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 Y R L+ ++P++ GD N+ D NP + A FT + R+ Sbjct: 296 PYRQTWDVAFRTY---LLSLDAKKPVVLCGDLNVAHNEIDLKNPKTNKRSAGFTPQEREG 352 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F + F D+ R + YSFW Y +S + N G R+D+ ++S + ++I Sbjct: 353 FTTILGTEFVDSFRVLYPEESAYSFWSYRHNSRALNVGWRLDYFVVSQRFMQSVADSQI- 411 Query: 243 TKPRGWTKPSDHTPVIVSLDI 263 R SDH P+++ L + Sbjct: 412 ---RSQVYGSDHCPIVLHLSL 429 >gi|237750354|ref|ZP_04580834.1| exodeoxyribonuclease LexA [Helicobacter bilis ATCC 43879] gi|229373884|gb|EEO24275.1| exodeoxyribonuclease LexA [Helicobacter bilis ATCC 43879] Length = 255 Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 67/261 (25%), Positives = 107/261 (40%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + + D+ C+QE+K F + Sbjct: 1 MKMISWNVNGLRACMTKGFMDFFNTIDADVFCIQESKMHRSQSDF-VFDGYYQFWNEAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G ILSK +P+ + + D + R I A + + + N Sbjct: 60 KGYSGTIILSKTEPLSVCNDMGIAHHDKEGRIIVAEYA------TFFLVNVYTPNSKREL 113 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + R + LE +P+I GD N+ + D NP +A FT E R+ Sbjct: 114 ERLTYRQEWEDDFRSFLKGLEQYKPVIVCGDLNVAHKEIDLKNPKTNRRNAGFTDEEREK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 L + GF D+ R + H Y++W Y + N G RID+ +LS L A I Sbjct: 174 MSVLLDSGFIDSYRYFYPDKEHAYTWWSYMGKARQNNTGWRIDYFLLSRCLAKNLKEAHI 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 + G SDH PV + +D Sbjct: 234 YPEIMG----SDHCPVGIVID 250 >gi|15892269|ref|NP_359983.1| exodeoxyribonuclease III [Rickettsia conorii str. Malish 7] gi|15619409|gb|AAL02884.1| exodeoxyribonuclease III [Rickettsia conorii str. Malish 7] Length = 286 Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 79/271 (29%), Positives = 125/271 (46%), Gaps = 7/271 (2%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETC 60 S++ + TWN+NS+R RI L E+ PDII LQETK D FP E ++++ Y H+ Sbjct: 14 SLMKIVTWNINSLRLRIDLLRKLAYEHQPDIILLQETKVADSLFPLEVIKNIGYEHVIYS 73 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 GQKSYNGVAI+SK+ + + + I I+ + + Sbjct: 74 GQKSYNGVAIISKFPLNNVFSLELYNSDKRHIAAIVNDIEIHNFYV---PAGGDIPDIEV 130 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 +TK+ K+ +++ + + + +I GD NI P HD ++ N T R Sbjct: 131 NTKFKHKLEYVRLMQEWLTTNRTKNDKMIIVGDLNIAPHEHDVWSSKQLRNVISHTDIER 190 Query: 181 QSFQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLLH 237 +LQN + Y++W Y W K N+G R+DHI +S L Sbjct: 191 SLLVELQNALGFIDSSRHFVSLDEKFYTWWSYRNIDWKKSNRGRRLDHIWVSDNLKGALF 250 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268 S + ++ R W+ PSDH P V+ ++ + Sbjct: 251 SMHLLSEARDWSSPSDHVPYFVTFNLQMSSR 281 >gi|297583616|ref|YP_003699396.1| exodeoxyribonuclease III [Bacillus selenitireducens MLS10] gi|297142073|gb|ADH98830.1| exodeoxyribonuclease III [Bacillus selenitireducens MLS10] Length = 254 Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 57/259 (22%), Positives = 108/259 (41%), Gaps = 12/259 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA I ++ +E D+ +QE K ++ + LQ + + Sbjct: 1 MKLISWNVNGLRACIRKGFLSFFEEAGADLFAVQEIKLQEGQVDLD-LQGYRQYWNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G A+ +K +P+ + + G++ I + + + Sbjct: 60 KGYSGTAVFTKVEPLRVFRNGVGNERQQSEGRILTLEFASFFLVNVYTPNSQRDLARLHE 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + Q LE E+P+I GD N+ + D N ++ FT E R Sbjct: 120 RLQ-----WEDAFYAYLQELENEKPVIVCGDMNVAHEEIDLRNAKSNRGNSGFTTEERAK 174 Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +LQ+ D+ R + Y++W Y +N G RID+ ++S + S ++ I Sbjct: 175 MTRLQSEWLIDSYRYYYPDQEGAYTWWSYMKTVRERNIGWRIDYFLVSDKLKSAMNDVSI 234 Query: 242 DTKPRGWTKPSDHTPVIVS 260 + G SDH P+ ++ Sbjct: 235 YSDVLG----SDHCPIGLT 249 >gi|303232423|ref|ZP_07319115.1| exodeoxyribonuclease III [Atopobium vaginae PB189-T1-4] gi|302481507|gb|EFL44575.1| exodeoxyribonuclease III [Atopobium vaginae PB189-T1-4] Length = 259 Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 77/263 (29%), Positives = 118/263 (44%), Gaps = 15/263 (5%) Query: 5 TVATWNVNSIRARIH---NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 +A+WNVN +RA + N ++ N DII +QETK ++ + L Sbjct: 8 RLASWNVNGLRAVMKKDPNFIDVVQSLNVDIIGIQETKLQEGQIALD-LPGYTQTWSYAE 66 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G A+ SK P++ + + D + R F N+Y P+ + Sbjct: 67 RKGYSGTAVFSKEAPLQTIHTIGCSAADNEGRVCALEF----NDFWFVNVYTPNSKNELA 122 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + R L+ ++P+I GD+N + D NP +A F+ E R Sbjct: 123 RLDER--MEWDEAYRSFLHTLDAKKPVITCGDFNCAHEEIDLKNPATNHQNAGFSDEERA 180 Query: 182 SFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 SF KL N GFTD RA H T YS+W Y S +N G RID+ ++S + + AR Sbjct: 181 SFTKLLNTGFTDTFRAAHPTLTDAYSWWSYRMRSRERNAGWRIDYFLVSDRIKNQVSDAR 240 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263 I G SDH PV +++ + Sbjct: 241 IHADVYG----SDHCPVGLTITL 259 >gi|254445623|ref|ZP_05059099.1| exodeoxyribonuclease III [Verrucomicrobiae bacterium DG1235] gi|198259931|gb|EDY84239.1| exodeoxyribonuclease III [Verrucomicrobiae bacterium DG1235] Length = 251 Score = 168 bits (424), Expect = 1e-39, Method: Composition-based stats. Identities = 70/260 (26%), Positives = 103/260 (39%), Gaps = 12/260 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNF-PFETLQSLNYHIETCG 61 + +WNVN IRA + + + D ICLQETK F+ S Sbjct: 1 MKFVSWNVNGIRAIMKKGAMDFFDGCDADFICLQETKATADIVKDFDWGVSKTVLANEAE 60 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G AI+++ +P + + + D + R + A + + Sbjct: 61 KKGYSGTAIIARTEPESVSYGIGIEKHDGEGRVVTAEYPEFFIVTVYTPNAQNELRRLPY 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + R + LE +P+IF GD N+ D NP +A FT E R Sbjct: 121 RQ------EWDRDFLAYVKALEATKPVIFCGDLNVAHTEDDLANPKTNRKNAGFTDEERA 174 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F + GF D R YS+W Y + S+N G RID+ M+S L SA I Sbjct: 175 GFDDIVAAGFVDTFREFTQGKGHYSWWSYRGGARSRNVGWRIDYFMISESLRPQLKSASI 234 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 + G SDH PV + Sbjct: 235 LPEVLG----SDHCPVEMVF 250 >gi|83944983|ref|ZP_00957349.1| exodeoxyribonuclease III [Oceanicaulis alexandrii HTCC2633] gi|83851765|gb|EAP89620.1| exodeoxyribonuclease III [Oceanicaulis alexandrii HTCC2633] Length = 269 Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats. Identities = 75/274 (27%), Positives = 125/274 (45%), Gaps = 19/274 (6%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIET 59 M+ T+ATWN+NS+R R ++A+++KE PD+I LQE K FP + + + + H+ Sbjct: 1 MTPFTLATWNINSVRLRAPHVASFVKEAQPDVIALQEIKCLPDQFPRKEFEEMGFPHLHI 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 GQK +GVAI S+ + + + + N Y+P G Sbjct: 61 VGQKGLHGVAIASRTPIEPLDQDKLCPRG------EARFQRVRVNGVELQNYYIPAGGDE 114 Query: 120 T----STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + ++ K+ +++R +A+ R + PL+ GD+NI P+ HD ++ Sbjct: 115 PDPEINPRFAHKLEFLERLKGYAADRAKENAPLVLVGDFNIAPREHDVWSHKQLLKVVSH 174 Query: 176 TLEVRQSFQKLQNMGFTDAIRA--THDTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEA 232 T ++ G + + L+++W Y + W + N+G R+DHI +SP Sbjct: 175 TPVEVEALNAWLEAGEYIDVARELIDEPEKLFTWWSYRSKDWRASNRGRRLDHIWVSPAL 234 Query: 233 TSLLH-----SARIDTKPRGWTKPSDHTPVIVSL 261 S RI R W KPSDH PV + L Sbjct: 235 KDAALKDGRDSFRIWDNARDWEKPSDHAPVTLRL 268 >gi|330836714|ref|YP_004411355.1| exodeoxyribonuclease III Xth [Spirochaeta coccoides DSM 17374] gi|329748617|gb|AEC01973.1| exodeoxyribonuclease III Xth [Spirochaeta coccoides DSM 17374] Length = 252 Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats. Identities = 73/261 (27%), Positives = 114/261 (43%), Gaps = 13/261 (4%) Query: 5 TVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 +WNVN IR+ + + + DI CLQETK ++ E L + + +K Sbjct: 3 KFVSWNVNGIRSCLGKGFLDYFFSTDADIFCLQETKLQEGQHDIE-LPDYHQYWNYAQKK 61 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 Y+G A+ SK +P+ + + D + R I A + + + Sbjct: 62 GYSGTALFSKEKPVRVTFGIAPFIEDAEGRVITAEYPA-----YFLVCVYTPNSQRELLR 116 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 D ++ W F + LE +P+ GD N+ + D NP +A FT E R F Sbjct: 117 LDYRMKWDDAFRAYILS-LEAMKPVFVCGDLNVAHKEIDLKNPKSNVRNAGFTQEERDKF 175 Query: 184 QKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 + GFTD+ R + YS+W Y A++ +KN G RID+ + S +H + ID Sbjct: 176 SLFLDAGFTDSFRHLYPHVIDRYSWWSYMANARAKNIGWRIDYWLTSNRYADKIHDSLID 235 Query: 243 TKPRGWTKPSDHTPVIVSLDI 263 G SDH PV + LD+ Sbjct: 236 DHIPG----SDHAPVALLLDL 252 >gi|326315164|ref|YP_004232836.1| exodeoxyribonuclease III Xth [Acidovorax avenae subsp. avenae ATCC 19860] gi|323372000|gb|ADX44269.1| exodeoxyribonuclease III Xth [Acidovorax avenae subsp. avenae ATCC 19860] Length = 271 Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats. Identities = 71/272 (26%), Positives = 117/272 (43%), Gaps = 16/272 (5%) Query: 2 SVVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFP--FETLQSLNYHIE 58 S+ + + N+N IR A + AWI E PD IC+QE K + + FETL L H Sbjct: 4 SLFKLTSLNLNGIRSAASKGVEAWIAETRPDCICVQEIKAQSADMEGRFETLAGLKGHFH 63 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 +K Y+GV I ++++P ++ + D + R++EA F + L I + Y P G+ Sbjct: 64 YATKKGYSGVGIYTRHEPTDVRVGYGSSEFDAEGRYVEARFDTPARKLSIISAYFPSGSS 123 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + R++ E I GD NI Q D N + ++ F E Sbjct: 124 GPERQLA--KFRFLAEFHVHLMRVKEEREFILCGDVNIAHQQIDLKNWRSNQKNSGFLPE 181 Query: 179 VRQSFQKLQNMGFTD-------AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 R+ KL + + T Y++W +++ N G R+D+ + +P Sbjct: 182 EREWMTKLLHQTDPGGGLVDVYRLLQPDTTETAYTWWSNRGQAYANNVGWRLDYHLATPA 241 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +L + I + K SDH P+ V D+ Sbjct: 242 IAALARTESIYKQ----QKFSDHAPITVGYDL 269 >gi|323357077|ref|YP_004223473.1| exonuclease III [Microbacterium testaceum StLB037] gi|323273448|dbj|BAJ73593.1| exonuclease III [Microbacterium testaceum StLB037] Length = 282 Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 70/280 (25%), Positives = 115/280 (41%), Gaps = 20/280 (7%) Query: 2 SVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 V + + NVN IRA + + W++ + DI+ LQE + + E L + Sbjct: 3 RSVRIVSINVNGIRAAVRKGMVEWLEASGADIVTLQEVRATAEQL-AEALPGWRIVNDEA 61 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 QK GVAI+S+ +E THL + LD R+IE F I+ +T+ I + Y+ G + Sbjct: 62 LQKGRAGVAIISRLPGVETRTHLGPEPLDASGRWIETDFDIDGETVTIVSAYVHSGE-VD 120 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K D K ++ + + E + GD N+ + D N +A F R Sbjct: 121 TPKQDAKWLFLDAMEQRLATLKAERELALVTGDLNVGHRELDIKNWRGNRKNAGFLPRER 180 Query: 181 QSFQKLQN-----------------MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223 F + R + Y+FW ++ + G RI Sbjct: 181 AYFDRFFGPAGEQVEGVDGSVGTGLGWVDVGRRRMGEVEGPYTFWSMRGKAFDTDSGWRI 240 Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 D+ + +P + R+D P T+ SDH+PVIV + Sbjct: 241 DYHVATPALAERVTDYRVDRAPSYDTRWSDHSPVIVDYTL 280 >gi|313816882|gb|EFS54596.1| exodeoxyribonuclease III [Propionibacterium acnes HL059PA1] gi|315100096|gb|EFT72072.1| exodeoxyribonuclease III [Propionibacterium acnes HL059PA2] Length = 317 Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 61/297 (20%), Positives = 105/297 (35%), Gaps = 37/297 (12%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +A++N+N IRA + + ++ + D+I LQE + + P + Sbjct: 21 MRIASFNINGIRAALKRGFSERMEARDCDVIGLQEVRCRPADLPEGAFGDRHVSWAPGSL 80 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDL------------------------DVQARFIEAT 98 NGVA+L++ P E+ + + Sbjct: 81 AGRNGVALLTRTAPAEVRSWGTHLVMAPGQAPTPAQALTGNTDGLPTELLPFADEGRYIE 140 Query: 99 FTINTQTLRIGNLYLPHGNPITS----------TKYDDKISWIKRFLRFASQRLELEEPL 148 + L + LYLP G K + +R + Sbjct: 141 VDLADTPLTVACLYLPKGATPDPANEKTIAKQDRKMAFLTGFRDHLVRRRQECTTQGRHF 200 Query: 149 IFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL--QNMGFTDAIRATHDTHHLYS 206 + GD+NI + D N + + F E RQ F + + DT+ YS Sbjct: 201 LVMGDFNIAHENADLKNWKANQRNEGFLPEERQWFDTILSPDTLIDVVRAQHPDTNGPYS 260 Query: 207 FWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +W + ++ + G RID+ + SPE S +A ID P + SDH V+V D+ Sbjct: 261 WWSWRGKAFVNDAGWRIDYHLASPELASKAITAEIDRDPSYSERTSDHAAVVVDYDL 317 >gi|239813296|ref|YP_002942206.1| exodeoxyribonuclease III Xth [Variovorax paradoxus S110] gi|239799873|gb|ACS16940.1| exodeoxyribonuclease III Xth [Variovorax paradoxus S110] Length = 267 Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 65/270 (24%), Positives = 111/270 (41%), Gaps = 16/270 (5%) Query: 3 VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFP--FETLQSLNYHIET 59 + + + N+N +R A +A W+ E PD IC+QE + + + FE + L H Sbjct: 1 MFKLTSLNLNGLRSAATKGVADWVAELAPDCICMQEIRVQASDIEGRFEEMAGLKGHFHF 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y G AI +++ P +V + D + R++E F + L I + Y P G+ Sbjct: 61 AEKKGYAGTAIYTRHAPSAVVVGWGDAEFDAEGRYLELRFDTPRRKLSIISCYFPSGSSG 120 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + + L+ E I GD NI + D N + ++ F E Sbjct: 121 EER--QEAKFRFLKGFFPHLTALKKEREFILCGDINIAHKEIDLKNWRGNQKNSGFLPEE 178 Query: 180 RQSFQKLQNMGFTD-------AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 R +L + G + T Y++W +++ N G R+D+ + +P Sbjct: 179 RAWMTRLLDAGADGAGLVDVYRLLKPDTTGEAYTWWSNRGQAYANNVGWRLDYHLATPAL 238 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 +L S +I K SDH P+ V D Sbjct: 239 GALARSEQIYKTI----KFSDHAPITVDYD 264 >gi|23097966|ref|NP_691432.1| exodeoxyribonuclease [Oceanobacillus iheyensis HTE831] gi|22776190|dbj|BAC12467.1| exodeoxyribonuclease [Oceanobacillus iheyensis HTE831] Length = 269 Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 62/261 (23%), Positives = 117/261 (44%), Gaps = 13/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN IRA + + +E D C+QE+K ++ + L + + Sbjct: 1 MHFISWNVNGIRACVRKGFLDFFQEMGADFFCIQESKLQEGQIQLD-LDGYYQYWNYAER 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K++P+ + + ++ + + R I + + + N+Y P+ + Sbjct: 60 KGYSGTAIFTKWEPLHVFYGIDSNNYEPEGRIITLEYE----SFYLVNVYTPNSKRDLTR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 D L Q+L ++PL++ GD N+ D N ++ FT E R Sbjct: 116 LEDRLEWE--DRLFDYLQKLNKKKPLVYCGDLNVAHHEIDLRNDKTNHGNSGFTKEERSK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +L + GF D +R H ++++W Y +N G RID+ ++S + L + + Sbjct: 174 MSRLLDAGFVDTLRHFHPEADDIFTWWSYMKTIRERNIGWRIDYFIVSEQLIPALKKSEV 233 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 + G SDH P+ + +D Sbjct: 234 HSSVLG----SDHCPIGLVID 250 >gi|319956878|ref|YP_004168141.1| exodeoxyribonuclease iii [Nitratifractor salsuginis DSM 16511] gi|319419282|gb|ADV46392.1| exodeoxyribonuclease III [Nitratifractor salsuginis DSM 16511] Length = 258 Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 64/260 (24%), Positives = 99/260 (38%), Gaps = 14/260 (5%) Query: 6 VATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ--SLNYHIETCGQ 62 +WNVN IR+ W+ + P I+ LQE K E+ FP + + + ++ + + Sbjct: 7 FVSWNVNGIRSVAKKGALKWVDKEPPHILGLQEVKAEEDQFPEDLFEHRYAHRYVSSSHK 66 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K +GVA+ + +P D L I + N Sbjct: 67 KGQSGVALFTDLEPEYYSPCYEVDILKEGRINEIHFDKIAFFNVYFPN------GKRNEE 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + K+ + RF + +IF GD N +P D P E + F R Sbjct: 121 RLAYKLEFYDRFFEHIEGLRKKGMSIIFCGDVNTAHRPIDLARPKENEGISGFLPVERAW 180 Query: 183 FQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 KL G+ D R H D YS+W + +N G RID+ +S + + A I Sbjct: 181 IDKLIEHGYIDTFRYIHGDEPERYSWWSMRTKARERNVGWRIDYFFVSKDLKERILDADI 240 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 + G SDH PV + L Sbjct: 241 LAEIEG----SDHAPVSLRL 256 >gi|313794091|gb|EFS42113.1| exodeoxyribonuclease III [Propionibacterium acnes HL110PA1] gi|315077107|gb|EFT49182.1| exodeoxyribonuclease III [Propionibacterium acnes HL053PA2] gi|327451399|gb|EGE98053.1| exodeoxyribonuclease III [Propionibacterium acnes HL092PA1] Length = 297 Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 61/297 (20%), Positives = 105/297 (35%), Gaps = 37/297 (12%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +A++N+N IRA + + ++ + D+I LQE + + P + Sbjct: 1 MRIASFNINGIRAVLKRGFSERMEARDCDVIGLQEVRCRPADLPEGAFGDRHVSWAPGSL 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDL------------------------DVQARFIEAT 98 NGVA+L++ P E+ + + Sbjct: 61 AGRNGVALLTRTAPAEVRSWGTHLVMAPGQAPTPAQALTGNTDGLPTELLPFADEGRYIE 120 Query: 99 FTINTQTLRIGNLYLPHGNPITS----------TKYDDKISWIKRFLRFASQRLELEEPL 148 + L + LYLP G K + +R + Sbjct: 121 VDLADTPLTVACLYLPKGATPDPANEKTIAKQDRKMAFLTGFRDHLVRRRQECTTQGRHF 180 Query: 149 IFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL--QNMGFTDAIRATHDTHHLYS 206 + GD+NI + D N + + F E RQ F + + DT+ YS Sbjct: 181 LVMGDFNIAHENADLKNWKANQRNEGFLPEERQWFDTILSPDTLIDVVRAQHPDTNGPYS 240 Query: 207 FWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +W + ++ + G RID+ + SPE S +A ID P + SDH V+V D+ Sbjct: 241 WWSWRGKAFVNDAGWRIDYHLASPELASKAITAEIDRDPSYSERTSDHAAVVVDYDL 297 >gi|32491120|ref|NP_871374.1| exonuclease III [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] gi|25166327|dbj|BAC24517.1| xthA [Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis] Length = 267 Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 71/266 (26%), Positives = 123/266 (46%), Gaps = 7/266 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++NVN IR+ + I++ NP+II LQETK +++FP + Y GQK Sbjct: 1 MKFVSFNVNGIRSHYDQVLLIIEKINPEIISLQETKVINESFPEKIFLQHGYKSYVHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122 ++GVA L++ I T + + + R I + + I N+Y P+G + Sbjct: 61 QHHGVAFLTRLNMKNIFTGFKNNFFNERYRVISSYIKTKIGNVYIINIYSPNGESKKNLK 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC------YNPIIWENDACFT 176 K++ K + K F ++ E ++ GD NI P+ D Y + F Sbjct: 121 KFEIKKIFYKSLFLFLNKFYEKNMHILIMGDMNISPEDLDVGLSLTSYKRWLSIGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 E R+ +K+ GF D R + +S++DY ++ + KN G+RID + + S + Sbjct: 181 PEEREWIKKIFKWGFVDVFRFLNPDKKKFSWFDYRSEGYIKNVGLRIDLFLSTFSLLSYI 240 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLD 262 + + R K SDH P+ + L+ Sbjct: 241 EESGMIYSIRSMDKTSDHVPIWIKLN 266 >gi|119358281|ref|YP_912925.1| exodeoxyribonuclease III Xth [Chlorobium phaeobacteroides DSM 266] gi|119355630|gb|ABL66501.1| exodeoxyribonuclease III Xth [Chlorobium phaeobacteroides DSM 266] Length = 256 Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 62/259 (23%), Positives = 103/259 (39%), Gaps = 8/259 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A+WNVN IRAR L +WI N+PD++ LQE K + + P + Y G Sbjct: 1 MKIASWNVNGIRARQEALVSWIGRNSPDVLVLQEVKADLADIPASISELEGYDSFWNGSS 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 G + + ++ F T ++T + Y+P G Sbjct: 61 FRKGYSGTGMLVRKGAFSGTVEWEIPAF-DFENRTCVLHTGQFTLTGCYVPRGE--GDEH 117 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ + ++ F L ++F GD N+ + D + E R S Sbjct: 118 YRLKLRYFEQTRLFIENLLLEGRQIVFTGDMNVAHRDIDVHRSQNKPGAVGLRAEERSSI 177 Query: 184 QKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 +G D +R + L+++W Y+ ++ +N G RID LS + +D Sbjct: 178 DACLALGLRDVMRERAPERNDLFTWWPYWKNARERNLGWRIDCFFLSAAIAERVTMVAVD 237 Query: 243 TKPRGWTKPSDHTPVIVSL 261 R SDH P+I+ L Sbjct: 238 RDERS----SDHAPIILEL 252 >gi|307212268|gb|EFN88076.1| Recombination repair protein 1 [Harpegnathos saltator] Length = 327 Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 73/259 (28%), Positives = 115/259 (44%), Gaps = 13/259 (5%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFET-LQSLNYHIETCG 61 + + TWNV+ IRA I N +I + + DII LQETK P E L +++ Sbjct: 75 LKICTWNVSGIRAVIKKNGLDYIAKEDADIIALQETKCGKDKMPDEIKLSGYHHYFLDSK 134 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 Q Y GVA+ K +P+ + L + D + R I A F + + G + + Sbjct: 135 QSGYCGVALFCKEKPVSVKYGLNNSNFDSEGRIIAAEFP---EFFMVNVYVPNAGQKLVT 191 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 K + + + L+ ++P+I GD N+ Q D NP +A FT E R Sbjct: 192 LP---KRLEWNKIFKKYIEELDQKKPVIICGDMNVAHQEIDLKNPKTNTKNAGFTKEERD 248 Query: 182 SFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 GF D R + Y+FW Y+A++ +K+ G R+D+ + S + + Sbjct: 249 GMTDFLAAGFIDTFRLLYPDKEGAYTFWSYFANARNKDIGWRLDYFLASERIKNKICDNI 308 Query: 241 IDTKPRGWTKPSDHTPVIV 259 I + G SDH PVI+ Sbjct: 309 IRKQVYG----SDHCPVIL 323 >gi|157825475|ref|YP_001493195.1| exodeoxyribonuclease III [Rickettsia akari str. Hartford] gi|157799433|gb|ABV74687.1| exodeoxyribonuclease III [Rickettsia akari str. Hartford] Length = 277 Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 78/264 (29%), Positives = 125/264 (47%), Gaps = 7/264 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62 + + TWN+NS+R RI L + E+ PDII LQETK D FP E ++++ Y H+ GQ Sbjct: 1 MKIVTWNINSLRLRIDLLRKLVYEHQPDIILLQETKVSDSLFPLEVIKNIGYEHVIYSGQ 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 KSYNGVAI+SK+ + + + I I+ + + + Sbjct: 61 KSYNGVAIISKFPLNNVFSLELYNSDKRHIAAIVNDIEIHNFYV---PAGGDIPDIDANL 117 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF-TLEVRQ 181 K+ K+ +++ + + + +I GD NI P HD ++ N +E Sbjct: 118 KFKHKLEYVRLMQEWLTTNRTRNDKIIIVGDLNIAPHEHDVWSSKQLRNVISHTDIERSL 177 Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLLHSA 239 + ++ F D+ R Y++W Y W K N+G R+DHI +S L S Sbjct: 178 LVELQNSLSFIDSSRYFVPLDEKFYTWWSYRNIDWKKSNRGRRLDHIWVSNNLKDALFSM 237 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 + ++ R W +PSDH P V+LD+ Sbjct: 238 HLLSEARDWLQPSDHVPYFVTLDV 261 >gi|285017195|ref|YP_003374906.1| exodeoxyribonuclease III protein [Xanthomonas albilineans GPE PC73] gi|283472413|emb|CBA14918.1| probable exodeoxyribonuclease III protein [Xanthomonas albilineans] Length = 266 Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 65/273 (23%), Positives = 105/273 (38%), Gaps = 24/273 (8%) Query: 4 VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + ++N N +R A W D++C+QETK + Y + Sbjct: 1 MRIVSFNANGLRSAATKGFFEWFAGQQTDVLCVQETKAQAPQLAGPAFLPEGYRVWFRDA 60 Query: 62 --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GVAI SK +P E+ T L + D + R++E F L + + Y+P G+ Sbjct: 61 STKKGYSGVAIYSKREPDEVRTALGWPEFDEEGRYLEVRFG----QLSVVSFYIPSGS-S 115 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K + Q L + GD+NI+ D N + ++ Sbjct: 116 GEVRQGYKFQVMDWLRPILVQWLHNGRDYVLCGDWNIVRSALDIKNWKSNQKNSGCLPAE 175 Query: 180 RQSFQKLQNMG-----------FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 R L + DA RA H Y++W + + + G RID+ + Sbjct: 176 RDWLNGLCADRAEDADAASGRGWVDAYRALHPDGQDYTWWSNRGAARANDVGWRIDYQFV 235 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +P LH I T+ R SDH P V Sbjct: 236 TPSLRERLHGCAIYTEQR----FSDHAPFTVDY 264 >gi|254439233|ref|ZP_05052727.1| exodeoxyribonuclease III (xth) subfamily [Octadecabacter antarcticus 307] gi|198254679|gb|EDY78993.1| exodeoxyribonuclease III (xth) subfamily [Octadecabacter antarcticus 307] Length = 262 Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 84/268 (31%), Positives = 121/268 (45%), Gaps = 11/268 (4%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIET 59 MS T+ATWN+NS+R R +A + E PD++CLQE K+ P E Q+L Y H+ Sbjct: 1 MS-FTLATWNINSVRLREGLVARLMTEEAPDVLCLQECKSPVDLIPLEQFQALGYHHMVA 59 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 GQK YNGVAI SK E+ + + + + N Y+P G Sbjct: 60 RGQKGYNGVAIFSKMAIEEVAAEDFVSLGHARHIAGKLENG-----VTVHNFYVPAGGDK 114 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACF-T 176 + + ++K +L P GD NI P+ D ++ T Sbjct: 115 PNREINEKFGQKLDYLTEMRDYFRANAPEKSILVGDLNIAPREDDVWDHKKLLKVVSHTT 174 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSL 235 +EV + D RA +LYS+W Y A W +KG R+DHI +P+ + Sbjct: 175 VEVEHLADVQGAGDWVDVTRADIPDGNLYSWWSYRAPDWDTADKGRRLDHIWATPDIANS 234 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 HS+R+ RGW +PSDH PV D+ Sbjct: 235 AHSSRVIRAVRGWEQPSDHAPVFAMFDL 262 >gi|86136925|ref|ZP_01055503.1| exodeoxyribonuclease III, putative [Roseobacter sp. MED193] gi|85826249|gb|EAQ46446.1| exodeoxyribonuclease III, putative [Roseobacter sp. MED193] Length = 262 Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats. Identities = 80/264 (30%), Positives = 116/264 (43%), Gaps = 10/264 (3%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQK 63 T+ATWN+NS+R R + ++E PD++CLQE K+ P E L Y ++ GQK Sbjct: 4 TLATWNINSVRLREGLVQKLMREEGPDVLCLQECKSPVDLIPTEGFAKLGYPYMVARGQK 63 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 YNGVAILS+ G + + + N Y+P G + Sbjct: 64 GYNGVAILSRLPIA-----EAGAEDFAGLGHARHIAGRLENGVTVHNFYVPAGGDKPDRE 118 Query: 124 YDDKISWIKRFLRFASQRLE--LEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180 ++K +L + E I GD NI P+ D ++ T EV Sbjct: 119 VNEKFGQKLDYLTEMRDWFKAAAPEKSILVGDLNIAPREDDVWDHKKMLKIVSHTPVEVD 178 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHSA 239 + G+ D RA LYS+W Y A W +KG R+DH+ + + HS+ Sbjct: 179 LLAEVQDAGGWADVTRADIPEGLLYSWWSYRAKDWDAADKGRRLDHVWATEDICQAAHSS 238 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 R+ RGW KPSDH PV + D+ Sbjct: 239 RVLRAARGWEKPSDHAPVFATFDL 262 >gi|226365708|ref|YP_002783491.1| exodeoxyribonuclease [Rhodococcus opacus B4] gi|226244198|dbj|BAH54546.1| exodeoxyribonuclease [Rhodococcus opacus B4] Length = 268 Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats. Identities = 66/267 (24%), Positives = 108/267 (40%), Gaps = 15/267 (5%) Query: 6 VATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL--NYHIETCGQ 62 + T NVN +RA L W++ D++CLQET+ D+ +L +++ + Sbjct: 5 ITTVNVNGVRAAARKGLTEWMERTEADVVCLQETRASDEQLAETLAPALEGGWNLASAEP 64 Query: 63 KS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 S NGVAILS+ + ++ R+IEA F L + +LYLP G T Sbjct: 65 SSKGRNGVAILSRKPADAVRVGHGDEEFAAAGRYIEADFD----DLTVASLYLPSGEAQT 120 Query: 121 STKYD---DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + + S+ + A + ++ GD+NI D N + ++ F Sbjct: 121 PRQEEKERFMDSFARYLTVTAEAAVAAGRHVVVCGDWNIAHTELDLKNWKTNKKNSGFLP 180 Query: 178 EVRQSFQKLQNMGFTDA---IRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 R+ L G A D YS+W Y ++ + G RID+ + + E Sbjct: 181 HEREWMSALFAEGAHWADVVRLLEPDVAGPYSWWSYRGKAFDNDSGWRIDYQIATRELAE 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261 A ++ + SDH PV V Sbjct: 241 RAKQAVVERAETYDQRWSDHAPVTVQY 267 >gi|319406308|emb|CBI79945.1| exodeoxyribonuclease III [Bartonella sp. AR 15-3] Length = 272 Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats. Identities = 76/267 (28%), Positives = 119/267 (44%), Gaps = 9/267 (3%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCG 61 + +ATWN+NSIR R+ + ++ + D++CLQE K D FP + ++ Y HI G Sbjct: 2 LFRIATWNINSIRLRLSQVLQYLDIFSVDMLCLQEIKCPDDLFPRQFFEAAGYQHIALSG 61 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 QKSY+GVAI+S+ + I D + + ++ + +RI N Y+P G Sbjct: 62 QKSYHGVAIISRLPFVSIERRFFCQKEDCRHLSVIIE--LHGRRIRIHNFYVPAGGDEPD 119 Query: 122 TKYDDKISWIKRF---LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL- 177 ++K + F + + GD NI P P D ++ T Sbjct: 120 VNKNEKFRYKLDFLEEMSSIRSDQGDGLASLLLGDLNIAPLPEDVWSHKQLLKVVSHTPI 179 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSL 235 E + G+ D +R LY++W Y A W+ ++G R+DHI SP Sbjct: 180 ETERLQALCCEGGWVDLMRMKFPIPTKLYTWWSYRARDWALADRGRRLDHIWSSPNLVPF 239 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262 + I + RGW + SDH PV D Sbjct: 240 VKELAIFREARGWPQASDHVPVQTLFD 266 >gi|71901538|ref|ZP_00683622.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Xylella fastidiosa Ann-1] gi|71728693|gb|EAO30840.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Xylella fastidiosa Ann-1] Length = 266 Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats. Identities = 44/270 (16%), Positives = 83/270 (30%), Gaps = 18/270 (6%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + ++++N N +R+ + W + D++C+QETK + + YH+ Sbjct: 1 MRISSFNANGLRSALSKGFFDWFSTQDIDVLCVQETKAQRHQLVGPDFFPVGYHVCFRDA 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 G + ++ Y E + + Sbjct: 61 TIKKGYSGVAIYSRCEPDELRTTLGWTEFDEEGRYVEARFGNLSVV--SFYIPSGSSGEK 118 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + K ++ + L + GD+NI+ D N + ++ R Sbjct: 119 RQNYKFEVMRWLRPILCEWLLSGRDYVLCGDWNIVRSALDIRNWKSNQKNSGCLPLERDW 178 Query: 183 FQKLQNMG-----------FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 L + D R H Y++W + N G RID+ +SP Sbjct: 179 LNGLCADSLHDVNSAQGRGWVDTYRVLHPQGEDYTWWSNRGAARINNVGWRIDYQFVSPG 238 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + I + R SDH P V Sbjct: 239 LRERVSRCAIYCEQR----FSDHAPYTVEY 264 >gi|300934594|ref|ZP_07149850.1| exodeoxyribonuclease III [Corynebacterium resistens DSM 45100] Length = 270 Score = 166 bits (421), Expect = 3e-39, Method: Composition-based stats. Identities = 73/278 (26%), Positives = 114/278 (41%), Gaps = 26/278 (9%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+NS+R R + ++ ++ D++CLQETK D+ FP Y G Sbjct: 1 MRIATWNINSVRIREERVREFLTRSDVDVLCLQETKCTDQQFP--DFTDTGYEQAHFGLH 58 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLD----VQARFIEATFTINTQTLRIGNLYLPHGNPI 119 S+NGVAILS+ + T+ D + N + + +LY+P+G I Sbjct: 59 SFNGVAILSRVGLSSVKTNFGQPGFDKDLTQKQNLEARAIGANCGGVEVWSLYVPNGREI 118 Query: 120 TSTKYDDKISWIKRFLRF--------------ASQRLELEEPLIFAGDYNIIPQPHDCYN 165 Y K+ W+ + + L GD+NI P+ D ++ Sbjct: 119 HDPHYTYKLRWLHALADYAGGRTTKAISADTADEAIEPASDRLCLVGDFNIAPRDEDVWD 178 Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225 + T R L+ G A Y++WDY A + K +G+RID Sbjct: 179 RSHFNGKTHVTPNERDCLAALEEAGLMQATALI---QDEYTYWDYQAMRFPKGEGMRIDL 235 Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 T +AR+D R SDH PVIV ++ Sbjct: 236 QYA-RGIT--ATAARVDRDERKGKGASDHAPVIVDYEV 270 >gi|326774141|ref|ZP_08233423.1| exodeoxyribonuclease III [Actinomyces viscosus C505] gi|326636280|gb|EGE37184.1| exodeoxyribonuclease III [Actinomyces viscosus C505] Length = 277 Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats. Identities = 54/277 (19%), Positives = 88/277 (31%), Gaps = 20/277 (7%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +AT NVN IRA + W+ + PDI+ LQE + D+ + L I C Sbjct: 1 MRIATVNVNGIRAAARKGMGEWLAASAPDILLLQEVRA-DEQIAVDLLPGYEAAIWPCRI 59 Query: 63 KSYNGV---------------AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107 K GV E G L+ + Sbjct: 60 KGRAGVGVAVREGGPATFGELRYGVAAPGTEEPDVDSGRWLEADLSLTGFDGIERLTVIS 119 Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167 G KY R + + ++ AGD N++ D N Sbjct: 120 AYLHSGQLGTEKMDQKYAHLELVDARMAELLAAARDGGPQVVMAGDLNVVRSERDIKNWK 179 Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRAT---HDTHHLYSFWDYYADSWSKNKGIRID 224 N ++ + + + Y++W ++ N G RID Sbjct: 180 PNHNKIAGVMDEEIAHLEGWFASGWVDASRHLVGDEEQGPYTWWSQRGKAFDNNAGWRID 239 Query: 225 HIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + +L+P HS +D P ++ SDH P++V Sbjct: 240 YQVLTPALAERAHSVTVDRAPDYASRWSDHAPLVVEY 276 >gi|320532068|ref|ZP_08032952.1| putative exodeoxyribonuclease III [Actinomyces sp. oral taxon 171 str. F0337] gi|320135713|gb|EFW27777.1| putative exodeoxyribonuclease III [Actinomyces sp. oral taxon 171 str. F0337] Length = 277 Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats. Identities = 53/277 (19%), Positives = 87/277 (31%), Gaps = 20/277 (7%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +AT NVN IRA + W+ + PDI+ LQE + D+ + L I C Sbjct: 1 MRIATVNVNGIRAAARKGMGEWLTASAPDILLLQEVRA-DEQIAVDLLPGYEAAIWPCRI 59 Query: 63 KSYNGV---------------AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107 K GV E G L+ + Sbjct: 60 KGRAGVGVAVRDGGPATLGELRYGVAAPGTEEPDVDSGRWLEADLSLTGFDGVEQLTVIS 119 Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167 G KY R + + ++ AGD N++ D N Sbjct: 120 AYLHSGQLGTEKMDQKYAHLELVDARMADLLAAARDGGPQVLMAGDLNVVRSERDIKNWK 179 Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRAT---HDTHHLYSFWDYYADSWSKNKGIRID 224 N ++ + + + Y++W ++ N G RID Sbjct: 180 PNHNKIAGVMDEEIAHLEGWFASGWVDASRHLVGDEEQGPYTWWSQRGKAFDNNAGWRID 239 Query: 225 HIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + +L+P S +D P ++ SDH P++V Sbjct: 240 YQVLTPALAERARSVTVDRAPDYASRWSDHAPLVVEY 276 >gi|189499147|ref|YP_001958617.1| exodeoxyribonuclease III Xth [Chlorobium phaeobacteroides BS1] gi|189494588|gb|ACE03136.1| exodeoxyribonuclease III Xth [Chlorobium phaeobacteroides BS1] Length = 256 Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats. Identities = 60/259 (23%), Positives = 105/259 (40%), Gaps = 9/259 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A+WN+N IRAR +L WI PDI+ L+E K ++K+ P E + Y G Sbjct: 1 MRIASWNINGIRARRDSLLGWIDRKKPDILVLEELKAQEKDIPEEIVAMQGYKKYWNGSA 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 G + + + + + T ++ L + Y+P G+ Sbjct: 61 FRKGYSGVGLLLKEGLCGECRLEIPEF--DCENRTVVLHGSNLSVIGTYVPRGD--GDAH 116 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ ++ + + L +I GD N+ D ++ E R + Sbjct: 117 YAVKLGYLSDLGTYILELLREGRQVIHTGDINVAHTDLDVHHSQNKPGIVGLRPEERAAI 176 Query: 184 QKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 + +G D +R ++++W Y+ + +N G RID LS + RID Sbjct: 177 DRHLEIGLHDIMRERFPDKKDMFTWWPYWKGARERNLGWRIDCFYLSKGLIGDVVDVRID 236 Query: 243 TKPRGWTKPSDHTPVIVSL 261 + K SDH PVI+ + Sbjct: 237 SA----EKSSDHAPVILDI 251 >gi|163839057|ref|YP_001623462.1| exodeoxyribonuclease III [Renibacterium salmoninarum ATCC 33209] gi|162952533|gb|ABY22048.1| exodeoxyribonuclease III [Renibacterium salmoninarum ATCC 33209] Length = 288 Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats. Identities = 64/272 (23%), Positives = 102/272 (37%), Gaps = 12/272 (4%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 V +A+ NVN IRA +A W+ + DI+CLQE + D Q + Sbjct: 16 VRIASVNVNGIRASYRKGMADWLAARDVDILCLQEVRAPDDVVEGFLAQDWHLLHAEAAD 75 Query: 63 KSYNGVAILSKYQ---PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 K GV I S+ PI T + D R++EA + ++ H + Sbjct: 76 KGRAGVLIASRKDSLEPIATRTGIGDDYFATTGRWVEADYKLSGGKQLTVVSAYVHSGEV 135 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K DDK ++ L + + + GD N+ D N +A F E Sbjct: 136 NTPKQDDKYRFLDVMLTRMPELAAHSDYALIVGDLNVGHTTLDIKNWKGNVKNAGFLPEE 195 Query: 180 RQSFQKLQN--------MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 R F + + Y++W ++ N G RID+ M +PE Sbjct: 196 RAYFDRFFSANDLKDGLGWKDVQREVAGQVEGPYTWWSQRGQAFDNNTGWRIDYQMATPE 255 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + +D T+ SDH P++V +I Sbjct: 256 LFAAAGDVVVDRAASYDTRRSDHAPLVVDYNI 287 >gi|309811929|ref|ZP_07705701.1| putative exodeoxyribonuclease III [Dermacoccus sp. Ellin185] gi|308434141|gb|EFP58001.1| putative exodeoxyribonuclease III [Dermacoccus sp. Ellin185] Length = 269 Score = 166 bits (419), Expect = 4e-39, Method: Composition-based stats. Identities = 54/264 (20%), Positives = 96/264 (36%), Gaps = 7/264 (2%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFP--FETLQSLNYHIETC 60 + V T NVN IRA W+ + PD++ +QE + K F + Y + Sbjct: 1 MRVITANVNGIRAAQRRGGLEWLAQQEPDVVAMQEVRASAKQFATALDGSALAEYELAHA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + + + + D D R++EA ++ +++ I ++Y+ G T Sbjct: 61 ESAAAGREGVAILTKHALASSSSVIDGFDEIGRWVEADVVVDGRSVTIASVYVHTGEAGT 120 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF-TLEV 179 + A ++ P + GD+N+ +D N A F E Sbjct: 121 DK---QTAKYAFLDALEARMAQLVDRPALVMGDFNVAHTANDLKNWKGNRGKAGFLEDEQ 177 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + QN D YS+W + ++ + G RID+ SP ++ Sbjct: 178 AYLTRLTQNGWVDVVRANHGDVPGPYSWWSWRGKAFDNDSGWRIDYQFASPALAAVAREP 237 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 I + SDH V+V D+ Sbjct: 238 WIGRAAAYDQRWSDHAAVVVDYDL 261 >gi|34499702|ref|NP_903917.1| exodeoxyribonuclease III [Chromobacterium violaceum ATCC 12472] gi|34105553|gb|AAQ61907.1| exodeoxyribonuclease III [Chromobacterium violaceum ATCC 12472] Length = 258 Score = 166 bits (419), Expect = 4e-39, Method: Composition-based stats. Identities = 61/263 (23%), Positives = 110/263 (41%), Gaps = 13/263 (4%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59 ++ + + N+N IR+ W+ + D +C+QE K + + + Sbjct: 1 MLRIVSANLNGIRSADKKGFFDWLAGIDADFVCVQELKAQAGDLSERMRNPDGLAGYFHY 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GV + +++QP +V L D +D + RF++ F L + +LYLP G+ Sbjct: 61 AEKKGYSGVGLYTRHQPDAVVEGLGVDWIDAEGRFLQLDFG----KLSVVSLYLPSGSSS 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + F+ + ++ GD+NI D N ++ F E Sbjct: 117 DERQQVKFDFLDV-FMPHLEKLRAEGRDIVICGDWNIAHNEIDLKNWKGNLKNSGFLPEE 175 Query: 180 RQSFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R L G+ D R + Y++W +++K+ G RID+ +++P L S Sbjct: 176 RAWMTDLLGRVGWRDVWRNLYPEAPGYTWWSNRGQAYAKDVGWRIDYQIVTPSLMELAES 235 Query: 239 ARIDTKPRGWTKPSDHTPVIVSL 261 A + K SDH P+IV Sbjct: 236 ASVYKD----EKFSDHAPLIVDY 254 >gi|111023203|ref|YP_706175.1| DNA-(apurinic or apyrimidinic site) lyase [Rhodococcus jostii RHA1] gi|110822733|gb|ABG98017.1| probable DNA-(apurinic or apyrimidinic site) lyase [Rhodococcus jostii RHA1] Length = 268 Score = 166 bits (419), Expect = 5e-39, Method: Composition-based stats. Identities = 65/267 (24%), Positives = 107/267 (40%), Gaps = 15/267 (5%) Query: 6 VATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL--NYHIETCGQ 62 + T NVN +RA L WI+ D++CLQET+ D+ +L +++ + Sbjct: 5 ITTVNVNGVRAAARKGLTEWIERTEADVVCLQETRASDEQLAETLAPALEGGWNLVSAEP 64 Query: 63 KS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 S NGVAILS+ D+ R++EA F L + +LYLP G T Sbjct: 65 SSKGRNGVAILSRKPADAFRVGHGDDEFATAGRYLEADFD----DLTVASLYLPSGEAQT 120 Query: 121 STKYD---DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + + S+ + A+ + ++ GD+NI D N + ++ F Sbjct: 121 PRQEEKERFMDSFARYLTATAAAAVAAGRHVVVCGDWNIAHTELDLKNWKTNKKNSGFLP 180 Query: 178 EVRQSFQKLQNMGFTDA---IRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 R+ L + D YS+W Y ++ + G RID+ + + E Sbjct: 181 NEREWLGALFAEDAHWTDVVRQLNPDVAGPYSWWSYRGKAFDNDSGWRIDYQIATRELAE 240 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261 A ++ + SDH PV V Sbjct: 241 RAKQAVVERAETYDQRWSDHAPVTVQY 267 >gi|120402563|ref|YP_952392.1| exodeoxyribonuclease III Xth [Mycobacterium vanbaalenii PYR-1] gi|119955381|gb|ABM12386.1| exodeoxyribonuclease III Xth [Mycobacterium vanbaalenii PYR-1] Length = 270 Score = 166 bits (419), Expect = 5e-39, Method: Composition-based stats. Identities = 66/273 (24%), Positives = 118/273 (43%), Gaps = 19/273 (6%) Query: 4 VTVATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKNF--PFETLQSLN 54 + + T NVN IRA + L AW KE D++CLQET+ +D+ + + Sbjct: 1 MILTTINVNGIRAAVKQRSVENLGLLAWFKETASDVVCLQETRADDEQLGEALAPVLADG 60 Query: 55 YHIET--CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 +H+ + K NGVA+LS+ ++ ++ R+IE + +G++Y Sbjct: 61 WHLASAAPHVKGRNGVAVLSRSPFDDVRIGCGAEEFAAHGRYIEVDTAG----VTVGSVY 116 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFA---SQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 +P G T + + + R A ++ +E + +GD+NI +D N Sbjct: 117 VPTGEAETDRQLEKERFMAAVAARMAVLLARSVEDGRHAVLSGDWNIAHTENDIKNWKGN 176 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIML 228 A F + RQ +L G+ D +R H Y++W + ++ + G RID+ + Sbjct: 177 VKKAGFLPQERQWLTELLGTGWVDVVRQAHPDVAGPYAWWSWRGKAFDNDAGWRIDYQLA 236 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +P + + + + SDH PV V Sbjct: 237 TPGLAGRVAAVTTERPAAYALRWSDHCPVTVHY 269 >gi|307721179|ref|YP_003892319.1| exodeoxyribonuclease III [Sulfurimonas autotrophica DSM 16294] gi|306979272|gb|ADN09307.1| exodeoxyribonuclease III [Sulfurimonas autotrophica DSM 16294] Length = 258 Score = 165 bits (418), Expect = 5e-39, Method: Composition-based stats. Identities = 61/260 (23%), Positives = 93/260 (35%), Gaps = 10/260 (3%) Query: 6 VATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64 + +WNVN IRA WI E + I+CLQE K + + P + + + Sbjct: 7 IISWNVNGIRAVANKEALKWIDERDTGILCLQEIKAQKEQIPDNLFEKEFSEVIINSGER 66 Query: 65 YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124 + T D I T + + + Sbjct: 67 KGYSGTATYSMLKSDYTSTCNDIDTKHEGRIIETHYGDIVLFNVY----FPNGQKDEERL 122 Query: 125 DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ 184 K+ + FL + Q + + +I GD N + D NP + F R+ Sbjct: 123 AYKMKFYDDFLAYCEQLKDEGKSIIVCGDVNTAHREIDLKNPKANSKTSGFLPIEREWID 182 Query: 185 KLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 K N G+ D R H D YS+W Y ++ KN G RID+ +S + L A I Sbjct: 183 KFLNHGYIDTFRYVHGDKEDAYSWWSYRFNARVKNVGWRIDYFFISEDLAENLEDAFILD 242 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 G SDH P+ + + I Sbjct: 243 YIEG----SDHCPIGIRITI 258 >gi|221369426|ref|YP_002520522.1| Exodeoxyribonuclease III [Rhodobacter sphaeroides KD131] gi|221162478|gb|ACM03449.1| Exodeoxyribonuclease III [Rhodobacter sphaeroides KD131] Length = 255 Score = 165 bits (418), Expect = 5e-39, Method: Composition-based stats. Identities = 94/258 (36%), Positives = 142/258 (55%), Gaps = 4/258 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+NVN + R+ L W++E PD+ CLQE K FP L++ Y GQK Sbjct: 1 MRIATFNVNGVNGRLPVLLRWLEEVRPDVACLQELKAASARFPAAALEAAGYGAVWHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 S+NGVAIL++ D ++R+IEA + +G LY+P+GNP K Sbjct: 61 SWNGVAILARGAEPVRTRQDLPGVQDGESRYIEAAVQG----VLVGCLYMPNGNPAPGPK 116 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K++W L A + L + P++ AGD+N++P D + P W DA F E R +F Sbjct: 117 FAAKLAWFDHLLNHAEELLRHDVPVVLAGDFNVMPTDLDVHRPERWREDALFRPEARAAF 176 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +L G+TDA+R H +Y+FWDY ++W ++ G+R+DH++LSP L A +D Sbjct: 177 ARLLTQGWTDAVRHLHPEDRIYTFWDYLRNAWERDAGLRLDHLLLSPSLLPRLKKAGVDR 236 Query: 244 KPRGWTKPSDHTPVIVSL 261 RGW K SDH P + + Sbjct: 237 HVRGWEKASDHAPAWIEI 254 >gi|257069277|ref|YP_003155532.1| exodeoxyribonuclease III Xth [Brachybacterium faecium DSM 4810] gi|256560095|gb|ACU85942.1| exodeoxyribonuclease III Xth [Brachybacterium faecium DSM 4810] Length = 273 Score = 165 bits (418), Expect = 5e-39, Method: Composition-based stats. Identities = 57/271 (21%), Positives = 99/271 (36%), Gaps = 12/271 (4%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 T+AT NVN +RA + W+ + D+I LQE + ++ + + E Sbjct: 2 TFTIATVNVNGLRAAARKGMGDWLAATSADVITLQEVRAPEELLAGLVGEGWSIAGEASQ 61 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA---------TFTINTQTLRIGNLY 112 K GVAI + ++ L + +TL + + Y Sbjct: 62 LKGRAGVAIAVRSSREDVDLDAMRCGLPGVEGDSHTGRWIESDLADPFGDGRTLTVISCY 121 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 + GN DK +++ + Q + GD NI D N Sbjct: 122 MHSGNTEKPQTMTDKYAFLDAMMLRLEQLRAAGGHVALTGDINIAHTEWDIKNWKGNLKS 181 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRA--THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230 A F E R +L + D Y++W ++ + G RID+ + + Sbjct: 182 AGFLPEERAYLDRLTTDAGFVDVHRALHGDGPGPYTWWSQRGKAFDNDAGWRIDYQLATE 241 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + + SA++D P T+ SDH P+++S Sbjct: 242 DLAARATSAQVDRAPSYDTRWSDHAPLVISY 272 >gi|149521136|ref|XP_001516262.1| PREDICTED: similar to APEX nuclease (multifunctional DNA repair enzyme) 1 [Ornithorhynchus anatinus] Length = 324 Score = 165 bits (418), Expect = 5e-39, Method: Composition-based stats. Identities = 68/269 (25%), Positives = 119/269 (44%), Gaps = 17/269 (6%) Query: 2 SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQ----SLNYH 56 + + + +WNV+ +RA + W++E PDI+CLQETK + P E Y Sbjct: 66 ATLKICSWNVDGLRAWVKKKGLDWVREEAPDILCLQETKCAESKLPPELKDLSDFPHRYW 125 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 ++ Y+GV +LS+ +P+ + + ++ D + R I A F + + G Sbjct: 126 AAPADKEGYSGVGLLSRRRPLSVSYGIGEEEHDQEGRVIVAEFEAF---VLVTVYVPNSG 182 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + Y + R A + L+ GD N+ + D NP + +A FT Sbjct: 183 RGLVRLDYRQRWDQAFRRFLQAQAARKP---LVLCGDLNVAHEEIDLRNPKGNKKNAGFT 239 Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E + + L + D+ R + + Y+FW Y ++ SKN G R+D+ +LS Sbjct: 240 PQERQGFGELLGTVDLADSFRHLYPAAAYAYTFWTYMMNARSKNVGWRLDYFLLSRALLP 299 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 L ++I + G SDH P+ + L + Sbjct: 300 SLCDSKIRSAALG----SDHCPITLYLAL 324 >gi|47213945|emb|CAF94476.1| unnamed protein product [Tetraodon nigroviridis] Length = 320 Score = 165 bits (418), Expect = 5e-39, Method: Composition-based stats. Identities = 75/261 (28%), Positives = 124/261 (47%), Gaps = 16/261 (6%) Query: 5 TVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQ----SLNYHIET 59 + +WNV+ +RA + W++E NPD++CLQETK +K+ P + Y + Sbjct: 66 KITSWNVDGLRAWVKKKGLDWVREENPDVLCLQETKCAEKSLPADITSMPEYPYKYWAGS 125 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 ++ Y+GVA+L K +P+++ + ++ D + R I A F + G + Sbjct: 126 DDKEGYSGVAMLCKTEPVKVTYGIGKEEHDKEGRVITAEFPGF---FLVTAYVPNSGRGL 182 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 Y R L++++P++ GD N+ Q D NP + +A FT E Sbjct: 183 VRLDYR---KTWDADFRTYLSELDVQKPVVLCGDLNVAHQEIDLKNPKGNKKNAGFTAEE 239 Query: 180 RQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R+ F +L GF D+ R + H YSFW Y ++ KN G R+D+ +LS L Sbjct: 240 REGFGQLLEAGFVDSFRELYPEQSHAYSFWTYMMNARDKNVGWRLDYFVLSSSLLPGLCD 299 Query: 239 ARIDTKPRGWTKPSDHTPVIV 259 ++I R K SDH P+ + Sbjct: 300 SKI----RNQVKGSDHCPITL 316 >gi|28198064|ref|NP_778378.1| exodeoxyribonuclease [Xylella fastidiosa Temecula1] gi|182680692|ref|YP_001828852.1| exodeoxyribonuclease III Xth [Xylella fastidiosa M23] gi|28056124|gb|AAO28027.1| exodeoxyribonuclease [Xylella fastidiosa Temecula1] gi|182630802|gb|ACB91578.1| exodeoxyribonuclease III Xth [Xylella fastidiosa M23] Length = 266 Score = 165 bits (418), Expect = 5e-39, Method: Composition-based stats. Identities = 43/270 (15%), Positives = 80/270 (29%), Gaps = 18/270 (6%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + ++++N N +R+ + W + D++C+QE K + YH+ Sbjct: 1 MRISSFNANGLRSALSKGFFDWFSTQDIDVLCVQEIKAQRHQLVGPDFFPAGYHVCFRDA 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 G + ++ Y E + + Sbjct: 61 TIKKGYSGVAIYSRCEPDELRTTLGWAEFDEEGRYVEARFGNLSVV--SFYIPSGSSGEK 118 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + K ++ + L + GD+NI+ D N + ++ R Sbjct: 119 RQHYKFEVMRWLRPILCEWLLSGRDYVLCGDWNIVRSALDIRNWKSNQKNSGCLPLERDW 178 Query: 183 FQKLQNMG-----------FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 L + D R H Y++W + N G RID+ +SP Sbjct: 179 LNGLCADSLHDVNSAQGRGWVDTYRVLHPQGEDYTWWSNRGAARVNNVGWRIDYQFVSPG 238 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + I + R SDH P V Sbjct: 239 LRERVSRCAIYCEQR----FSDHAPYTVEY 264 >gi|233305|gb|AAB19427.1| Rrp1=recombination repair protein 1 [Drosophila, Peptide, 253 aa] Length = 253 Score = 165 bits (418), Expect = 5e-39, Method: Composition-based stats. Identities = 69/263 (26%), Positives = 115/263 (43%), Gaps = 13/263 (4%) Query: 4 VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNV +RA + I PDI CLQETK + P E + YH Sbjct: 1 LKICSWNVAGLRAWLKKDGLQLIDLEEPDIFCLQETKCANDQLPEEVTRIPGYHPYWLCM 60 Query: 63 KSYN-GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 GVAI SK PI + + ++ D R I A + + N+Y+P+ Sbjct: 61 PGGYAGVAIYSKIMPIHVEYGIGNEEFDDVGRMITAEYE----KFYLINVYVPNSGRKLV 116 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 ++ + ++L+ +P++ GD N+ P D NP +A FT E R Sbjct: 117 NLEPR--MRWEKLFQAYVKKLDALKPVVICGDMNVSHMPIDLENPKNNTKNAGFTQEERD 174 Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 +L +GF D R + Y+FW Y A++ ++N G R+D+ ++S + Sbjct: 175 KMTELLGLGFVDTFRHLYPDRKGAYTFWTYMANARARNVGWRLDYCLVSERFVPKV---- 230 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263 ++ + R SDH P+ + +I Sbjct: 231 VEHEIRSQCLGSDHCPITIFFNI 253 >gi|323699266|ref|ZP_08111178.1| exodeoxyribonuclease III [Desulfovibrio sp. ND132] gi|323459198|gb|EGB15063.1| exodeoxyribonuclease III [Desulfovibrio desulfuricans ND132] Length = 255 Score = 165 bits (418), Expect = 5e-39, Method: Composition-based stats. Identities = 69/265 (26%), Positives = 108/265 (40%), Gaps = 15/265 (5%) Query: 4 VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSL----NYHIE 58 + + +WNVN RA + W+ D++ LQETK E + + +Y Sbjct: 1 MIIYSWNVNGYRAVLKKDFRDWLDGCGGDVVMLQETKVEPDQLALDEREPDSFSNHYWNW 60 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + +K Y+GVA + +PI T LP D + R + + + N+Y P+G Sbjct: 61 SKKKKGYSGVACFANPEPIRWDTGLPDDRFRDEGRVLHLEYP----DFHLFNIYFPNGQM 116 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 D +Q L +P++ GD+N + D NP + F Sbjct: 117 SDERL--DFKMGFYDTFLEHAQALRRTKPIVVGGDFNTAHREIDLKNPKANSERSGFLPV 174 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R K G+ D R D H YS+W Y ++ N G RID+ +S E + Sbjct: 175 ERAWIDKFIEHGYVDTFRLFEDGPHHYSWWSYRFNARKNNAGWRIDYFFVSEELKDKVVR 234 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263 A I+ G SDH P+ V +D+ Sbjct: 235 AWIEPDVLG----SDHCPIGVEIDV 255 >gi|319407783|emb|CBI81434.1| exodeoxyribonuclease III [Bartonella sp. 1-1C] Length = 272 Score = 165 bits (418), Expect = 6e-39, Method: Composition-based stats. Identities = 78/264 (29%), Positives = 117/264 (44%), Gaps = 9/264 (3%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64 +ATWN+NSIR R+ + ++ + D++CLQE K D FP + ++ Y HI GQKS Sbjct: 5 IATWNINSIRLRLSQVLQYLDIFSVDMLCLQEIKCPDDLFPRQFFEAAGYQHIALSGQKS 64 Query: 65 YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124 Y+GVAI+S+ I + D R + ++ + +RI N Y+P G Sbjct: 65 YHGVAIISRLPFISVERRFFCQKEDC--RHLSVVIELHGRKIRIHNFYVPAGGDEPDVNK 122 Query: 125 DDKISWIKRF---LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180 ++K F + + GD NI P P D ++ T E Sbjct: 123 NEKFRHKLDFLEEMSSIRADHRDGLESLLLGDLNIAPLPEDVWSHKQLLKVVSHTPIETE 182 Query: 181 QSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHS 238 + G+ D +R LY++W Y A W+ ++G R+DHI SP + Sbjct: 183 RLQALCCEGGWVDLMRMKFPIPTKLYTWWSYRARDWALSDRGRRLDHIWSSPNLVPFVKE 242 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 I RGW +PSDH PV D Sbjct: 243 LTIFRDTRGWPQPSDHVPVQTLFD 266 >gi|212704397|ref|ZP_03312525.1| hypothetical protein DESPIG_02452 [Desulfovibrio piger ATCC 29098] gi|212672118|gb|EEB32601.1| hypothetical protein DESPIG_02452 [Desulfovibrio piger ATCC 29098] Length = 269 Score = 165 bits (418), Expect = 6e-39, Method: Composition-based stats. Identities = 75/278 (26%), Positives = 110/278 (39%), Gaps = 24/278 (8%) Query: 1 MSVVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 MS+ + +WNVN +RA W EN D+I LQETK + E + Sbjct: 1 MSI-RLVSWNVNGLRAVSAKPEWRWFAENTCDVIGLQETKAMPEQLKPEVASPEGWEAHW 59 Query: 60 ---CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 +K Y+GVA+ S+ +P+ + LP + + R + F N Y P+G Sbjct: 60 ASSVVKKGYSGVAVFSRIKPLAVRCELPQPEWQGEGRILHLEFE----KFHFFNGYFPNG 115 Query: 117 N----------PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 K ++ +P++ GD+NI + D P Sbjct: 116 GAEELDENGKPIPGRFKRVPYKMGFFDAFTAYAEECRKSKPIVVCGDFNIAHKAIDLARP 175 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDH 225 E + F E R + MG+ D R H D YS+W Y + KN G RID+ Sbjct: 176 KQNEKNTGFLPEERAFLDRFTAMGYVDTFRHVHGDVEGRYSWWSYKMRAREKNVGWRIDY 235 Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +S E + A I+ G SDH PV + LDI Sbjct: 236 FFVSEELKPYIRDAWIEDDVYG----SDHCPVGLELDI 269 >gi|87201202|ref|YP_498459.1| exodeoxyribonuclease III [Novosphingobium aromaticivorans DSM 12444] gi|87136883|gb|ABD27625.1| exodeoxyribonuclease III [Novosphingobium aromaticivorans DSM 12444] Length = 263 Score = 165 bits (418), Expect = 6e-39, Method: Composition-based stats. Identities = 76/264 (28%), Positives = 118/264 (44%), Gaps = 4/264 (1%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCG 61 +++VATWN+NS+R R + ++ + PD++CLQE K + FP E + L Y H G Sbjct: 1 MISVATWNINSVRLRADQVERFLLQEAPDVLCLQEIKCAESVFPHEVFEKLGYTHRAIHG 60 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 QK Y+GVA +S+ + H D+ + + +E N L G+ Sbjct: 61 QKGYHGVATVSRIPFRDFSRHDWQDNGEARHIGVELLGPGNGLILE-NVYIPAGGDVADR 119 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180 + R ++E P + GD+NI P D Y+ T EV Sbjct: 120 EVNPKFGQKLDFLERMTRWAEKIERPTLIVGDFNIAPLECDVYDHKALLKVVSHTPLEVE 179 Query: 181 QSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + G+ D R YS+W Y + +K++G R+DH+ SPEA + Sbjct: 180 TLQRFADAHGWVDLGRKHIPAPERNYSWWSYRSYWRAKDQGRRLDHMWASPEAAAQTRGH 239 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 R + R W +PSDH P+I LD+ Sbjct: 240 RFVEETRKWDQPSDHIPLITELDL 263 >gi|194333003|ref|YP_002014863.1| exodeoxyribonuclease III Xth [Prosthecochloris aestuarii DSM 271] gi|194310821|gb|ACF45216.1| exodeoxyribonuclease III Xth [Prosthecochloris aestuarii DSM 271] Length = 258 Score = 165 bits (418), Expect = 6e-39, Method: Composition-based stats. Identities = 63/260 (24%), Positives = 108/260 (41%), Gaps = 8/260 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVN IRAR L W+ PDI+ LQE K ++++ P E L Y G Sbjct: 1 MKIATWNVNGIRARKSALYDWVVGTMPDILILQELKADEESIPDEILSLEGYSKFWNGST 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQAR-FIEATFTINTQTLRIGNLYLPHGNPITST 122 G + + ++ + ++ T ++ + + Y+P G Sbjct: 61 FKKGYSGVGMLVRDDLNGNDGCYHYEIPDFDIENRTVVLHGRGFSLIGTYVPRGE--GDA 118 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 Y K+++++ + L+ +I GD N+ D ++ E R + Sbjct: 119 HYGVKLNYLEGVATYIGGLLDEGREIILTGDMNVAHTALDVHHSQNKPGAVGLRAEERSA 178 Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 + +G D +R H LY++W Y+ + +N G RID LS S + + Sbjct: 179 LDRQLQLGLHDIMRERHPGREGLYTWWPYWKGARERNLGWRIDCFYLSGGLLSQVQDVVV 238 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 D + K SDH PVI+ + Sbjct: 239 DIE----EKSSDHAPVILDI 254 >gi|319404823|emb|CBI78424.1| exodeoxyribonuclease III [Bartonella rochalimae ATCC BAA-1498] Length = 272 Score = 165 bits (418), Expect = 6e-39, Method: Composition-based stats. Identities = 78/264 (29%), Positives = 117/264 (44%), Gaps = 9/264 (3%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64 +ATWN+NSIR R+ + ++ + D++CLQE K D FP + ++ Y HI GQKS Sbjct: 5 IATWNINSIRLRLSQVLQYLDIFSVDMLCLQEIKCPDDLFPRQFFEAAGYQHIALSGQKS 64 Query: 65 YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124 Y+GVAI+S+ I + D R + ++ + +RI N Y+P G Sbjct: 65 YHGVAIISRLPFISVERCFFCQKEDC--RHLSVVIELHGRKIRIHNFYVPAGGDEPDVNK 122 Query: 125 DDKISWIKRF---LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180 ++K F + + GD NI P P D ++ T E Sbjct: 123 NEKFRHKLDFLEEMSSIRADQGDGLESLLLGDLNIAPLPEDVWSHKQLLKVVSHTPIETE 182 Query: 181 QSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHS 238 + G+ D +R LY++W Y A W+ ++G R+DHI SP + Sbjct: 183 RLQALCCEGGWVDLMRMKFPIPTKLYTWWSYRARDWALSDRGRRLDHIWSSPNLVPFVKE 242 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 I RGW +PSDH PV D Sbjct: 243 LAIFRDTRGWPQPSDHVPVQTLFD 266 >gi|323141860|ref|ZP_08076721.1| exodeoxyribonuclease III [Phascolarctobacterium sp. YIT 12067] gi|322413607|gb|EFY04465.1| exodeoxyribonuclease III [Phascolarctobacterium sp. YIT 12067] Length = 236 Score = 165 bits (418), Expect = 6e-39, Method: Composition-based stats. Identities = 71/245 (28%), Positives = 112/245 (45%), Gaps = 11/245 (4%) Query: 19 HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIE 78 A +++E PDIICLQETK + + F + + +K Y+G A+ +K +P+ Sbjct: 3 KGFAEFLQEAAPDIICLQETKMQREQADF-VFPGYEEYWNSAERKGYSGTAVFTKVKPLA 61 Query: 79 IVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFA 138 + L ++ D + R I F + + G + + R Sbjct: 62 VTYGLGQEEHDKEGRVITLEFASF-YLVTVYTPNSKDGLARLDYR-----MVWEDVFRAY 115 Query: 139 SQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT 198 Q L+ ++P++ GD N+ + D NP +A FT E R F++L+ GFTD+ R Sbjct: 116 LQELDAKKPVVVCGDLNVAAEEIDLKNPKTNRRNAGFTDEERAKFRELKAAGFTDSFRYL 175 Query: 199 HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVI 258 H YS+W Y + KN G RID+ ++S L SA I + G SDH PV Sbjct: 176 HPEEVKYSWWSYRFKAREKNAGWRIDYFVVSDRIADKLQSAEIHNEVFG----SDHCPVS 231 Query: 259 VSLDI 263 + LD+ Sbjct: 232 IELDV 236 >gi|34580716|ref|ZP_00142196.1| exodeoxyribonuclease III [Rickettsia sibirica 246] gi|28262101|gb|EAA25605.1| exodeoxyribonuclease III [Rickettsia sibirica 246] Length = 271 Score = 165 bits (417), Expect = 6e-39, Method: Composition-based stats. Identities = 78/269 (28%), Positives = 124/269 (46%), Gaps = 7/269 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62 + + TWN+NS+R RI L E+ PDII LQETK D FP E ++++ Y H+ GQ Sbjct: 1 MKIVTWNINSLRLRIDLLRKLAYEHQPDIILLQETKVADSLFPLEVIKNIGYEHVIYSGQ 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 KSYNGVAI+SK+ ++ + + I I+ + + +T Sbjct: 61 KSYNGVAIISKFPLNDVFSLELYNSDKRHIAAIVNDIEIHNFYV---PAGGDIPDIEVNT 117 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K+ K+ +++ + + + +I GD NI P HD ++ N T R Sbjct: 118 KFKHKLEYVRLMQEWLTTNRTKNDKMIIVGDLNIAPHEHDVWSSKQLRNVISHTDIERSL 177 Query: 183 FQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLLHSA 239 +LQN + Y++W Y W K N+G R+DHI +S L S Sbjct: 178 LVELQNALGFIDSSRHFVSLDEKFYTWWSYRNIDWKKSNRGRRLDHIWVSDNLKGALVSM 237 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268 + ++ R W+ PSDH P V+ ++ + Sbjct: 238 HLLSEARDWSSPSDHVPYFVTFNLQMSSR 266 >gi|145590186|ref|YP_001156783.1| exodeoxyribonuclease III Xth [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145048592|gb|ABP35219.1| exodeoxyribonuclease III Xth [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 260 Score = 165 bits (417), Expect = 6e-39, Method: Composition-based stats. Identities = 58/267 (21%), Positives = 105/267 (39%), Gaps = 15/267 (5%) Query: 3 VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IET 59 ++ + + N+N IR A W + D IC+QE K + + L H Sbjct: 1 MLRIISANLNGIRSAVKKGFLPWAVKQKADFICMQELKAQRDDLEDAILNPDGLHGFFHH 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G I + ++P E++ ++ D + R++EA F L + ++Y+P G+ Sbjct: 61 AEKKGYSGCGIYTPHKPDEVLYGYGNEEFDAEGRYVEARFKG----LSVISVYMPSGSSS 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K ++ FL ++ GD NI D N ++ F E Sbjct: 117 PER-QEAKYRYLDSFLPHLIALKNSGREIVLCGDVNIAHHEIDLKNWKGNLKNSGFLPEE 175 Query: 180 RQSFQKLQNMGFTDAIRATHDT---HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 R L + + + Y++W +++KN G RID+ + +P + Sbjct: 176 RAWLTNLFDQVGYVDVYRELEPKATETCYTWWSNRGQAYAKNVGWRIDYHISTPSIAASA 235 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263 + K SDH P+ V D Sbjct: 236 KKTAVYKD----EKFSDHAPLTVDYDW 258 >gi|302334904|ref|YP_003800111.1| exodeoxyribonuclease III Xth [Olsenella uli DSM 7084] gi|301318744|gb|ADK67231.1| exodeoxyribonuclease III Xth [Olsenella uli DSM 7084] Length = 263 Score = 165 bits (417), Expect = 7e-39, Method: Composition-based stats. Identities = 61/264 (23%), Positives = 110/264 (41%), Gaps = 15/264 (5%) Query: 4 VTVATWNVNSIRARIHN---LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 + + +WNVN +RA + + + D+ +QETK ++ + L Sbjct: 11 LKLVSWNVNGLRAVMRKDPSFLQIFSQLDADVFAIQETKLQEGQVELD-LPGYFQTWNFA 69 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+G A+ S+ P+ ++ + D D + R F ++Y P+ Sbjct: 70 ERKGYSGTAVFSREDPLRVIRQIGSDVADDEGRVCALEFPT----FWFVDVYTPNSKQGL 125 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + + R L+ +P++ GD+N+ Q D NP + F+ R Sbjct: 126 ARIEER--MGWDERFRLFLLELDAHKPIVTCGDFNVAHQEIDLRNPSTNHENPGFSDAER 183 Query: 181 QSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 SF +L + GFTD R+ + YS+W Y + +N G RID+ + S + A Sbjct: 184 DSFGRLLDAGFTDTFRSLNPDLEGAYSWWSYRMRARERNVGWRIDYFLTSERVADRIEGA 243 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 I + G SDH P+ + + + Sbjct: 244 SIHDEVFG----SDHCPIELQIRL 263 >gi|184201443|ref|YP_001855650.1| putative exodeoxyribonuclease III [Kocuria rhizophila DC2201] gi|183581673|dbj|BAG30144.1| putative exodeoxyribonuclease [Kocuria rhizophila DC2201] Length = 279 Score = 165 bits (417), Expect = 7e-39, Method: Composition-based stats. Identities = 62/273 (22%), Positives = 100/273 (36%), Gaps = 13/273 (4%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 V +AT NVN IRA +A W+ D++CLQE + DK E L + ++ Sbjct: 8 VRIATVNVNGIRAAYRRGMADWLAPRGVDLLCLQEVRAPDK-ITRELLDEDVWDVQHTEA 66 Query: 63 KSYNGVAIL---------SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 + + S P + + D R+IE T+ Sbjct: 67 AAKGRAGVAIATRRDAFDSALLPTAARVGIGEEYFDDSGRWIENDVTLPNGETLTLVSAY 126 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 H + + K DK ++ L Q + + + GD N+ D N +A Sbjct: 127 VHSGEVDTPKQTDKYRFMDAMLTRLPQLAQGSDHALVVGDLNVGHTERDIKNWKGNVKNA 186 Query: 174 CFTLEVRQSFQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 F E R F + A D Y++W Y ++ + G RID+ M +P Sbjct: 187 GFLPEERAYFDRFFGDVGYVDVARSLAGDVPGPYTWWSYRGKAFDTDAGWRIDYHMATPG 246 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 + SA +D + SDH P++V + Sbjct: 247 LAARARSATVDRAASYHVRFSDHAPLVVDYALD 279 >gi|220911966|ref|YP_002487275.1| exodeoxyribonuclease III Xth [Arthrobacter chlorophenolicus A6] gi|219858844|gb|ACL39186.1| exodeoxyribonuclease III Xth [Arthrobacter chlorophenolicus A6] Length = 277 Score = 165 bits (417), Expect = 7e-39, Method: Composition-based stats. Identities = 62/269 (23%), Positives = 111/269 (41%), Gaps = 10/269 (3%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +A+ NVN +RA +AAW++ + DI+CLQE + D + + Sbjct: 10 LRIASVNVNGLRAAYKNGMAAWLEPRDVDILCLQEVRAPDAIVRQLLGEGWHILHAEAEA 69 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT-----QTLRIGNLYLPHGN 117 K GVAI S+ +PI + D R++EA F + L + + Y+ G Sbjct: 70 KGRAGVAIASREEPIATRNGIGDDYFATAGRWVEADFRVTDASGERVQLTVASAYVHSGE 129 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + + K DDK ++ + + + + GD N+ P D N A F Sbjct: 130 -VDTPKQDDKYRFLDAMSTRLPELSKHSDHALVVGDLNVAHTPLDIRNWKGNLKKAGFLP 188 Query: 178 EVRQSFQKLQNM---GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 + R F + + + Y++W + ++ + G RID+ + +P + Sbjct: 189 DERAYFDRFLGEDIGWHDVHRTMSGEMDGPYTWWSWRGKAFDNDAGWRIDYHLATPALAA 248 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 SA +D T+ SDH P++V + Sbjct: 249 SATSAVVDRAATYDTRFSDHAPLVVDYQL 277 >gi|238650485|ref|YP_002916337.1| exodeoxyribonuclease III [Rickettsia peacockii str. Rustic] gi|238624583|gb|ACR47289.1| exodeoxyribonuclease III [Rickettsia peacockii str. Rustic] Length = 271 Score = 165 bits (417), Expect = 8e-39, Method: Composition-based stats. Identities = 79/271 (29%), Positives = 123/271 (45%), Gaps = 7/271 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62 + + TWN+NS+R RI L E+ PDII LQETK D FP E ++++ Y H+ GQ Sbjct: 1 MKIVTWNINSLRLRIDLLRKLAYEHQPDIILLQETKVADSLFPLEVIKNIGYEHVIYSGQ 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 KSYNGVAI+SK+ + + + I I+ + + +T Sbjct: 61 KSYNGVAIISKFPLNNVFSLELYNSDKRHIAAIVNDIEIHNFYV---PAGGDIPDIEVNT 117 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K+ K+ +++ + + + +I GD NI P HD ++ N T R Sbjct: 118 KFKHKLEYVRLMQEWLTTNRTKNDKMIIVGDLNIAPHEHDVWSSKQLRNVISHTDIERSL 177 Query: 183 FQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLLHSA 239 +LQN + Y++W Y W K N+G R+DHI +S L S Sbjct: 178 LVELQNALGFIDSSRHFVSLDEKFYTWWSYRNIDWKKSNRGRRLDHIWVSDNLKGALFSM 237 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQ 270 + ++ R W PSDH P V+ ++ + Q Sbjct: 238 HLLSEARDWFSPSDHVPYFVTFNLQMSSRDQ 268 >gi|317486298|ref|ZP_07945130.1| exodeoxyribonuclease III [Bilophila wadsworthia 3_1_6] gi|316922468|gb|EFV43722.1| exodeoxyribonuclease III [Bilophila wadsworthia 3_1_6] Length = 263 Score = 164 bits (416), Expect = 8e-39, Method: Composition-based stats. Identities = 67/269 (24%), Positives = 105/269 (39%), Gaps = 13/269 (4%) Query: 1 MSVVTVATWNVNSIRARIHNL--AAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 M + + +WNVN RA + W + D++ LQETK E E ++ E Sbjct: 1 MDTIRLVSWNVNGFRA-LSGKPDWDWFASTDADVVALQETKAEPSQIAEEHRSPEGWNAE 59 Query: 59 T---CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 +K Y+GVA+ S+ + + + D + + I N+Y P+ Sbjct: 60 WLAAQVKKGYSGVAVFSRQKAALEPLAVHRELPDPRYQGEGRLLHIEYPAFHFFNVYFPN 119 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 G ++ L +P++ GD+N +P D P E ++ F Sbjct: 120 GTKDDGRL--AYKMGYYDAFLAHAEELRRTKPIVVCGDFNTAHRPIDLARPKANEENSGF 177 Query: 176 TLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 R + G+ D R H D H YS+W Y + N G RID+ +S E Sbjct: 178 LPIERAWVDRFIAAGYVDTFRHIHGDEPHQYSWWSYKQRARVNNVGWRIDYFFVSEELAP 237 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + A I+ G SDH PV + L I Sbjct: 238 AIRDAWIENNVYG----SDHCPVGLELAI 262 >gi|237749208|ref|ZP_04579688.1| exodeoxyribonuclease III [Oxalobacter formigenes OXCC13] gi|229380570|gb|EEO30661.1| exodeoxyribonuclease III [Oxalobacter formigenes OXCC13] Length = 260 Score = 164 bits (416), Expect = 8e-39, Method: Composition-based stats. Identities = 61/266 (22%), Positives = 108/266 (40%), Gaps = 15/266 (5%) Query: 3 VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59 + ++ + N+N IR A W+ + D +CLQE K + + E Y + E Sbjct: 1 MFSITSVNLNGIRSAVKKGFLDWMNRSGSDFVCLQEIKAQSCDITPEVATPDGYQGYFEC 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G I +K P +I + D + R+ + F + +LY P G+ Sbjct: 61 AEKKGYSGTGIYTKTMPDKIENGFGSKEFDAEGRYFQCDFR----DFSLVSLYAPSGSSS 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K ++ F + + + + GD+NI + D N + ++ F E Sbjct: 117 PER-QEAKFRFMDEFYPYLKKLKDSGREFVICGDWNIAHKEIDLKNWKSNQKNSGFLPEE 175 Query: 180 RQS-FQKLQNMGFTDAIRATHDTH--HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 R +G+ D R H Y++W +++KN G RID+ + +P Sbjct: 176 RAWLTDVFDELGWVDVYRLLHPDTTGEAYTWWSNRGQAYAKNVGWRIDYQIATPGIAKKA 235 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLD 262 SA I + SDH P+ + D Sbjct: 236 VSADIYK----GERFSDHAPLTIRYD 257 >gi|294651921|ref|ZP_06729210.1| exodeoxyribonuclease III [Acinetobacter haemolyticus ATCC 19194] gi|292822153|gb|EFF81067.1| exodeoxyribonuclease III [Acinetobacter haemolyticus ATCC 19194] Length = 294 Score = 164 bits (416), Expect = 8e-39, Method: Composition-based stats. Identities = 62/267 (23%), Positives = 111/267 (41%), Gaps = 7/267 (2%) Query: 2 SVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIET 59 ++ V + NVN +RA + L W+++++ D++C+QE++ + + + Y H+ Sbjct: 32 KILRVVSINVNGLRASVTKGLLEWLEQSDADVVCMQESRITHEQWTDKFKPEGWYTHLFP 91 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 + Y G AI S+ + + L + D Q RFI A F + Sbjct: 92 AERAGYAGTAIYSRLPFVSVTNGLGFELADSQGRFITAEFDLGLSHPVHIASLYLPSGSS 151 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-E 178 K +++ + + Q + + +I GDYNI+ + D N + + E Sbjct: 152 GDEAQARKDVFLEEYAKILKQWRDENKSIIVCGDYNIVHKRIDIKNWSGNQKSSGVLPHE 211 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 +G+ D R LYS+W + +KN G RID+ SP+ + + Sbjct: 212 RSWLDHIYDELGYVDTFREVRPEAELYSWWSNRGQARAKNVGWRIDYHACSPDWKARTAN 271 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIPE 265 A + + SDH PVI+ I E Sbjct: 272 AWVYKE----QWFSDHAPVIIDYKIHE 294 >gi|303248033|ref|ZP_07334299.1| exodeoxyribonuclease III [Desulfovibrio fructosovorans JJ] gi|302490590|gb|EFL50495.1| exodeoxyribonuclease III [Desulfovibrio fructosovorans JJ] Length = 254 Score = 164 bits (416), Expect = 9e-39, Method: Composition-based stats. Identities = 53/260 (20%), Positives = 91/260 (35%), Gaps = 9/260 (3%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + N W+ D++ +QE+K + + + Sbjct: 1 MILMSWNVNGLRAVVQKNFWDWLSGCGADVVGIQESKIQPGH--EADFGGTEVYRTVWSS 58 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 + + + D + N+Y P+G Sbjct: 59 ATVKKGYSGVGCFYRVEPHDISLELPDEAYVGEGRLIQMEFDDFYFFNVYFPNGGRGPDR 118 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 ++ L ++P++ GD+N D N E + F E R Sbjct: 119 L--AYKFGYYDAFLAHAETLRRKKPIVVCGDFNTAHTALDLKNAKSNEKTSGFLPEERAW 176 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 + G+ D R Y++WDY + +N G RID+ +S E + A ID Sbjct: 177 LDRFIAAGYVDTFRMFEPEGGHYTWWDYRFKARDRNVGWRIDYFFVSEELRGKVRRAWID 236 Query: 243 TKPRGWTKPSDHTPVIVSLD 262 + G SDH PV + LD Sbjct: 237 SAVMG----SDHCPVGLDLD 252 >gi|283850748|ref|ZP_06368035.1| exodeoxyribonuclease III Xth [Desulfovibrio sp. FW1012B] gi|283573991|gb|EFC21964.1| exodeoxyribonuclease III Xth [Desulfovibrio sp. FW1012B] Length = 254 Score = 164 bits (416), Expect = 9e-39, Method: Composition-based stats. Identities = 67/263 (25%), Positives = 111/263 (42%), Gaps = 15/263 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET--- 59 + + +WNVN +RA + W+ + D++ +QE+K + + + + Y Sbjct: 1 MILMSWNVNGLRAVVQKGFWEWLSGSGADVVGIQESKLQTGH-EADFGHTGGYKTVWLSS 59 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GV L + +P I LP + R I+ F N+Y P+G Sbjct: 60 TVKKGYSGVGCLYRVEPRSIGLDLPDAAWCGEGRLIQMEF----NDFYFFNVYFPNGG-R 114 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K+ + + FL ++ L ++P++ GD+N D N E + F E Sbjct: 115 GPERLAYKLGYYEAFLAH-AEALRRKKPIVVCGDFNTAHTALDLKNAKANEKTSGFLPEE 173 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R G+ D R YS+WDY + +N G RID+ +S E + A Sbjct: 174 RAWLDGFVAAGYVDTFRMFEKEGGHYSWWDYRFKARDRNVGWRIDYFFVSEELRPRVKRA 233 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 ID G SDH PV + +D Sbjct: 234 WIDNTVFG----SDHCPVGLEID 252 >gi|213512198|ref|NP_001135227.1| DNA-(apurinic or apyrimidinic site) lyase [Salmo salar] gi|197631957|gb|ACH70702.1| APEX nuclease 1 [Salmo salar] gi|209154634|gb|ACI33549.1| DNA-apurinic or apyrimidinic site lyase [Salmo salar] gi|209154684|gb|ACI33574.1| DNA-apurinic or apyrimidinic site lyase [Salmo salar] Length = 312 Score = 164 bits (416), Expect = 9e-39, Method: Composition-based stats. Identities = 72/262 (27%), Positives = 123/262 (46%), Gaps = 16/262 (6%) Query: 4 VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQ----SLNYHIE 58 + + +WNV+ +RA + W+++ PD++CLQETK +K+ P E Y Sbjct: 57 MKITSWNVDGLRAWVKKKGLDWVRDEAPDVLCLQETKCAEKSLPDEITSMPEFPHKYWAG 116 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + ++ Y+GVA+L K +P+++ + ++ D + R I A F + G Sbjct: 117 SDEKEGYSGVAMLCKTEPLKVTYGIGKEEHDKEGRVITAEFPTF---FLVTAYVPNSGRG 173 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + Y + L+ +PL+ GD N+ + D N + +A FT E Sbjct: 174 LVRLDYRKTWDVEFKAY---LSDLDKRKPLVLCGDLNVAHEEIDLKNSKGNKKNAGFTAE 230 Query: 179 VRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 R+ F +L GFTD+ R + + Y+FW Y +S SKN G R+D+ +LS L Sbjct: 231 EREGFNQLLAAGFTDSFRELYPEQANAYTFWTYMMNSRSKNVGWRLDYFVLSSALLPGLC 290 Query: 238 SARIDTKPRGWTKPSDHTPVIV 259 ++I + G SDH P+ + Sbjct: 291 DSKIRNQAMG----SDHCPITL 308 >gi|119962536|ref|YP_947021.1| exodeoxyribonuclease III [Arthrobacter aurescens TC1] gi|119949395|gb|ABM08306.1| exodeoxyribonuclease III [Arthrobacter aurescens TC1] Length = 277 Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats. Identities = 61/277 (22%), Positives = 105/277 (37%), Gaps = 14/277 (5%) Query: 1 MSV------VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 MS + +A+ NVN +RA +A W++ DI+CLQE + D + Sbjct: 1 MSTALKKDFLRIASVNVNGLRAAYKNGMAEWLEPREVDILCLQEVRAPDDIVRKLIGEGW 60 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN--- 110 + K GVAI S+ +P + D D R++EA +T+ Sbjct: 61 HILHTEAEAKGRAGVAIASREEPTATRVGIGDDYFDTSGRWVEADYTVQNAAGEFTTLSV 120 Query: 111 -LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 H + + K +DK ++ + + + + GD N+ D N Sbjct: 121 VSAYVHSGEVGTPKQEDKFRFLDAMTVRLPELAKHSDHALVVGDLNVGHTELDIKNWKGN 180 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATH---DTHHLYSFWDYYADSWSKNKGIRIDHI 226 A F E R F + + Y++W ++ + G RID+ Sbjct: 181 VKRAGFLPEERAYFDRFLGEEIGWRDVHRGLAGNVAGPYTWWSQRGKAFDTDTGWRIDYH 240 Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + +P + SA +D P T+ SDH P++V + Sbjct: 241 LATPGLAAAAFSAVVDRAPSWDTRFSDHAPLVVDYRL 277 >gi|71905765|ref|YP_283352.1| AP endonuclease [Dechloromonas aromatica RCB] gi|71845386|gb|AAZ44882.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Dechloromonas aromatica RCB] Length = 259 Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats. Identities = 69/266 (25%), Positives = 114/266 (42%), Gaps = 15/266 (5%) Query: 3 VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ + + N+N IR A N+ W+ N D+ICLQE K + + E + Sbjct: 1 MLRIISLNLNGIRSAWSKNVLPWVAAQNADVICLQELKAQLPDLTPEMMAPDGMQAFYHC 60 Query: 62 --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GV I S+ +P ++ G + D + R+I A F L + +LYLP G+ Sbjct: 61 AEKKGYSGVGIWSREKPDRVIEGFDGGEFDAEGRYIRADFG----NLSVISLYLPSGSSS 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K ++ F ++ GD+NI Q D N + ++ F E Sbjct: 117 PER-QEAKFRFLDVFFPQMLALRAEGREIVLCGDWNIAHQAIDLKNWKSNQKNSGFLPEE 175 Query: 180 RQSFQKLQNMG-FTDAIRATHDT--HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 R +L + D R H Y++W +W+KN G RID+ + +P + Sbjct: 176 RAWLSRLFEEQGWVDVYRRLHPETTDACYTWWSNRGQAWAKNVGWRIDYQIATPGIAVMA 235 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLD 262 A + R SDH P+I+ D Sbjct: 236 VQAEVYKDER----FSDHAPLIIDYD 257 >gi|296116318|ref|ZP_06834934.1| exodeoxyribonuclease III Xth [Gluconacetobacter hansenii ATCC 23769] gi|295977137|gb|EFG83899.1| exodeoxyribonuclease III Xth [Gluconacetobacter hansenii ATCC 23769] Length = 264 Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats. Identities = 89/265 (33%), Positives = 123/265 (46%), Gaps = 6/265 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62 + + TWN+NS+R R+ L EN PDI+CLQETK D FP + +Q+L + H+ G Sbjct: 1 MRIMTWNINSLRLRLPLLERLCAENQPDIVCLQETKVTDDLFPLDAVQALGFPHVCFRGM 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 KSYNGVAILS+ + T P R I T + + + Y+P G I Sbjct: 61 KSYNGVAILSRQPMRML-TDTPDWCDRGDCRHIAVECGEGTDAVTVHDFYVPAGGDIPDP 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K + F+ A + GD NI P HD ++ T E Sbjct: 120 VENPKFAHKLAFVEEARAWFAQRDVCRTVVVGDLNIAPLEHDVWSHRQLLKIVSHTPEET 179 Query: 181 QSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLLHS 238 QN GF DA+R LY++W Y W + N+G R+DH+ ++P+ L Sbjct: 180 SRLLAWQNSGFVDAMRHFVPADEKLYTWWSYRNRDWSASNRGRRLDHVWVTPDLVPALRD 239 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263 + R W KPSDH PVIV L I Sbjct: 240 MSVLRPVRDWEKPSDHVPVIVDLAI 264 >gi|295396429|ref|ZP_06806591.1| exodeoxyribonuclease III [Brevibacterium mcbrellneri ATCC 49030] gi|294970731|gb|EFG46644.1| exodeoxyribonuclease III [Brevibacterium mcbrellneri ATCC 49030] Length = 272 Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats. Identities = 59/268 (22%), Positives = 108/268 (40%), Gaps = 6/268 (2%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN--YHIET 59 ++TVA+ NVN IRA + + W +N P I+ LQE + + + ++ + Sbjct: 1 MITVASVNVNGIRAAMRKGMEPWFNQNTPQILTLQEVRAAND-IAYSVMEPFGGSAYSAD 59 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 K GVA++S+ E+ + + R+IE + ++ + H Sbjct: 60 AEAKGRAGVAVVSQTPAREVRIGIGDEYFAGAGRWIECDYDLDDGSTLTVVSAYVHSGEA 119 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K DDK ++ R Q + + GD N+ D N + A F E Sbjct: 120 GTPKQDDKYRFLDRMKERLPQLARHADYALVTGDLNVGHTELDIKNWKANQKKAGFLPEE 179 Query: 180 RQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 R F + + + Y++W ++ + G RID+ M +P L Sbjct: 180 RAYFDEFFGDLGWIDVHRKLSGEVPGPYTWWSMRGKAFDNDAGWRIDYHMATPNLAELAS 239 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDIPE 265 +A++ + SDH P+++ D+PE Sbjct: 240 NAQVHRAASWGERWSDHAPLVIDYDLPE 267 >gi|149925921|ref|ZP_01914184.1| DNA-(apurinic or apyrimidinic site) lyase [Limnobacter sp. MED105] gi|149825209|gb|EDM84420.1| DNA-(apurinic or apyrimidinic site) lyase [Limnobacter sp. MED105] Length = 260 Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats. Identities = 63/268 (23%), Positives = 114/268 (42%), Gaps = 15/268 (5%) Query: 3 VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59 + + + N+N IR A W+ ++ D++C+QE K + E LQ Y + + Sbjct: 1 MTRIISANLNGIRSAHTKGFFDWMNQSQADVVCVQEIKAHLADLGPEHLQPGAYKGYFQA 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GV + K +PI+++ L + D + R + A F I + Sbjct: 61 AEKKGYSGVGLYCKVEPIDVIYGLNNAEFDAEGRMVTAEFENM-----IVSSIYFPSGSS 115 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + + + K +++ F + ++P++ GD+NI Q D N ++ FT E Sbjct: 116 SEERQEAKFRFLEHFAEIFDEFESKKKPVVLCGDWNIAHQEIDLKNWKGNLKNSGFTPEE 175 Query: 180 RQSFQKLQNMGFTDA---IRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 R + N + +T Y++W +++KN G RID+ M+SP + Sbjct: 176 RAWIGDVINKRGWIDAYRVLYPEETDGCYTWWSNRGQAYAKNVGWRIDYQMVSPALRDSI 235 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDIP 264 + K SDH P+I D P Sbjct: 236 REVSVYK----GQKFSDHAPLIADYDHP 259 >gi|171464285|ref|YP_001798398.1| exodeoxyribonuclease III Xth [Polynucleobacter necessarius subsp. necessarius STIR1] gi|171193823|gb|ACB44784.1| exodeoxyribonuclease III Xth [Polynucleobacter necessarius subsp. necessarius STIR1] Length = 260 Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats. Identities = 62/267 (23%), Positives = 108/267 (40%), Gaps = 15/267 (5%) Query: 3 VVTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IET 59 ++ + + N+N IR+ I W + D IC+QE K + + L H Sbjct: 1 MLRIISANLNGIRSAIKKGFLPWAVQQKADFICMQELKAQRDDLEDTILNPDGMHGFFHH 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+G I + Y+P E++ + D + R++EA F L + ++Y+P G+ Sbjct: 61 AEKKGYSGCGIYAPYKPDEVLYGYGNAEFDAEGRYVEARFKG----LSVISVYMPSGSSS 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K ++ FL +L ++ GD NI Q D N ++ F E Sbjct: 117 PER-QEAKYRYLDSFLPHLVALKKLGREIVLCGDVNIAHQEIDLKNWKGNLKNSGFLPEE 175 Query: 180 RQSFQKLQNMGFTDAIRATHDT---HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 R L + + + Y++W +++KN G RID+ + +P Sbjct: 176 RAWLTNLFSKVGYVDVYRQLEPKATETCYTWWSNRGQAYAKNVGWRIDYHISTPGIAQTA 235 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263 A + K SDH P+ V D Sbjct: 236 KKATVYKD----EKFSDHAPLTVDYDW 258 >gi|159042592|ref|YP_001531386.1| exodeoxyribonuclease III [Dinoroseobacter shibae DFL 12] gi|157910352|gb|ABV91785.1| exodeoxyribonuclease III [Dinoroseobacter shibae DFL 12] Length = 262 Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats. Identities = 85/268 (31%), Positives = 121/268 (45%), Gaps = 11/268 (4%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIET 59 MS+ T+ATWN+NS+R R +A +++ PD++CLQE K+ P ET + Y H+ Sbjct: 1 MSI-TIATWNINSVRLRADLVARLLRDEAPDVLCLQECKSPVDKIPLETFAARGYGHMVA 59 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 GQK YNGVAILS+ + D + L I N Y+P G + Sbjct: 60 RGQKGYNGVAILSRLPLEDAGHRDFVGKGDARHVAARLENG-----LTIHNYYVPAGGDV 114 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL 177 ++K FL P GD NI P+ D ++ T Sbjct: 115 PDRDVNEKFGHKLDFLAEMRAWFTDTAPEKSVLVGDLNIAPREDDVWSHKQLLKVVSHTP 174 Query: 178 -EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSL 235 EV + + D RA LYS+W Y A W + +KG R+DH+ S + + Sbjct: 175 IEVDTFETTREAGNWVDVTRADIPEGQLYSWWSYRARDWSAADKGRRLDHVWASADIAAA 234 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 H +RI + RGW +PSDH PV S D+ Sbjct: 235 AHGSRILREVRGWDQPSDHAPVFASFDL 262 >gi|255320035|ref|ZP_05361231.1| exodeoxyribonuclease III [Acinetobacter radioresistens SK82] gi|262380541|ref|ZP_06073695.1| exodeoxyribonuclease III [Acinetobacter radioresistens SH164] gi|255302903|gb|EET82124.1| exodeoxyribonuclease III [Acinetobacter radioresistens SK82] gi|262297987|gb|EEY85902.1| exodeoxyribonuclease III [Acinetobacter radioresistens SH164] Length = 273 Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 62/265 (23%), Positives = 109/265 (41%), Gaps = 7/265 (2%) Query: 2 SVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIET 59 ++ V + NVN +R+ + L W+++++ D+IC+QE++ + + Y H+ Sbjct: 12 KILRVVSINVNGLRSSVTKGLLEWLEQSDADVICMQESRITHAQWTDKFKPEGWYTHLFP 71 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 + Y G AI S+ I + L + D Q RF+ A F + Sbjct: 72 AERPGYAGTAIYSRLPFISVKDGLGFELADSQGRFVTAEFDLGFGYPVYICSLYLPSGSS 131 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-E 178 K +++ + + Q E + +I GDYNI+ + D N + + E Sbjct: 132 GDEAQARKDYFLEEYQKILKQWREEGKSIIICGDYNIVHKRIDIKNWSGNQKSSGCLPHE 191 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 +G+ D R LYS+W + +KN G RID+ SP+ + + Sbjct: 192 RAWLDHIYDELGYVDTFREVRPEAELYSWWSNRGQARAKNVGWRIDYQACSPDWKNRTVN 251 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263 A + + SDH PVI+ I Sbjct: 252 AWVYKE----QWFSDHAPVIIDYKI 272 >gi|325285209|ref|YP_004260999.1| exodeoxyribonuclease III Xth [Cellulophaga lytica DSM 7489] gi|324320663|gb|ADY28128.1| exodeoxyribonuclease III Xth [Cellulophaga lytica DSM 7489] Length = 254 Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 65/263 (24%), Positives = 114/263 (43%), Gaps = 14/263 (5%) Query: 4 VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFET--LQSLNYHIETC 60 + + +WNVN +RA + +K NPDI+C+QETK +D L++ + + Sbjct: 1 MHIVSWNVNGVRAVVKKEFFESVKYMNPDILCIQETKAQDNEVAKALSPLENFSLASNSA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+G A LS +P+ I + + D + R + + + N+Y+P+ Sbjct: 61 NKKGYSGTATLSSTKPLTIKADIGIEAHDTEGRVLCTEYE----NFYLVNVYVPNSGQKL 116 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND-ACFTLEV 179 + + + LE ++P+I GD+N+ + D N N A +T Sbjct: 117 DRL--EYRKQWDKDFLDYLKNLEKKKPVIACGDFNVAHKAIDLKNDKSNYNKTAGYTQTE 174 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 GF D+ R H +Y+FW Y S +N G RID+ ++S + Sbjct: 175 IDGMNNFIADGFVDSFRMLHPDEVVYTFWSYRFKSRERNTGWRIDYFLVSQSIKDKVKEV 234 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 + + G SDH P+ + +D Sbjct: 235 TVFSDIMG----SDHCPIGLKID 253 >gi|189345695|ref|YP_001942224.1| exodeoxyribonuclease III Xth [Chlorobium limicola DSM 245] gi|189339842|gb|ACD89245.1| exodeoxyribonuclease III Xth [Chlorobium limicola DSM 245] Length = 258 Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats. Identities = 65/263 (24%), Positives = 110/263 (41%), Gaps = 8/263 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A+WN+N IRAR +L AWI N PDI+ LQE K +++ P + L+ + + Sbjct: 1 MKIASWNINGIRARNASLEAWILRNQPDILLLQEVKAHEEDIPP-AISDLDAYRKFWNGS 59 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 + + + T ++T + Y+P G Sbjct: 60 TVRKGYSGTGILLRDSCKVDDVVWEVPDFDIENRTGVLHTTHFTLIGTYVPRGESDE--H 117 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ +++ R+ L+ +I AGD NI + D + E R + Sbjct: 118 YRIKLDYLESLRRYICSLLDSGRQVILAGDMNIAHRDIDVHRSQNKPGAVGLRPEERAAI 177 Query: 184 QKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 G D +R+ H L+++W Y+ + +N G RID LS E + + A +D Sbjct: 178 DAQIASGLQDIMRSMHPDAADLFTWWPYWKPARERNLGWRIDCFYLSSELAAKVTVASVD 237 Query: 243 TKPRGWTKPSDHTPVIVSLDIPE 265 + K SDH PVI+ L + + Sbjct: 238 LE----EKSSDHAPVILELSLQD 256 >gi|239906954|ref|YP_002953695.1| exodeoxyribonuclease III [Desulfovibrio magneticus RS-1] gi|239796820|dbj|BAH75809.1| exodeoxyribonuclease III [Desulfovibrio magneticus RS-1] Length = 254 Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats. Identities = 63/263 (23%), Positives = 104/263 (39%), Gaps = 15/263 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTE---DKNFPFETLQSLNYHIET 59 + + +WNVN +RA + W+ + D++ +QE+K + + +F Q + Sbjct: 1 MILVSWNVNGLRAVVQKGFWDWLAGSGADVVGIQESKIQTGHEADFGHTD-QYKTVWCSS 59 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GV + +P+ I LP + R + + N+Y P+G Sbjct: 60 TVKKGYSGVGCFYRAEPLSIAMELPDPAFAGEGRLLHLEYE----EFHFFNIYFPNGGRG 115 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 ++ L +P++ GD+N D N E + F E Sbjct: 116 PERL--AYKLGYYDAFLAHAEELRKHKPIVVCGDFNTAHTALDLKNAKANEKTSGFLPEE 173 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R + G+ D R YS+WDY + +N G RID+ +S E + A Sbjct: 174 RAWLDRFVAAGYVDTFRLFTTEGGHYSWWDYRFKARDRNVGWRIDYFFVSEELRPKVKRA 233 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 ID G SDH PV + LD Sbjct: 234 WIDAAVMG----SDHCPVGLELD 252 >gi|220904154|ref|YP_002479466.1| exodeoxyribonuclease III Xth [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868453|gb|ACL48788.1| exodeoxyribonuclease III Xth [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 268 Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats. Identities = 67/275 (24%), Positives = 109/275 (39%), Gaps = 22/275 (8%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET-- 59 + + +WNVN +RA W ++ ++ LQETK + + + + Sbjct: 2 LFKLVSWNVNGLRAVSAKADWDWFAHSDAQVVALQETKAHPEQLDEDVREPAGWESRWAS 61 Query: 60 -CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN- 117 +K Y+GVA+ S+ + LP + + R + + N Y P+G Sbjct: 62 STVKKGYSGVAVFSRVPFLSWSAELPQPEFQGEGRLLHLEYP----DFHFFNGYFPNGGA 117 Query: 118 --------PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 P + K ++ +P++ GD+NI +P D P Sbjct: 118 EELDENGKPTGNFKRVPYKMAYFEAFLAYAEECRKSKPIVVCGDFNIAHRPIDLARPKPN 177 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIML 228 E F E R + +G+ D R H D YS+W Y + +KN G RID+ + Sbjct: 178 EKCTGFLPEERAFLDRFTALGYVDTFRHVHGDAPDNYSWWSYKTRARAKNVGWRIDYFFV 237 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 S E + A I+ G SDH PV +SL+I Sbjct: 238 SQELAPAIRDAWIENDVYG----SDHCPVGLSLEI 268 >gi|149033629|gb|EDL88427.1| apurinic/apyrimidinic endonuclease 1, isoform CRA_b [Rattus norvegicus] Length = 294 Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats. Identities = 66/269 (24%), Positives = 112/269 (41%), Gaps = 40/269 (14%) Query: 2 SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN----YH 56 + + + +WNV+ +RA I W+KE PDI+CLQETK + P E + Y Sbjct: 59 ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLTHQYW 118 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 ++ Y+GV +LS+ P+++ + + + R Sbjct: 119 SAPSDKEGYSGVGLLSRQCPLKVSYGIAYVPNAGRGLVRLEYRQRWDEAFR--------- 169 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + L +PL+ GD N+ + D NP + +A FT Sbjct: 170 --------------------KFLKDLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 209 Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E + + LQ + D+ R + + Y+FW Y ++ SKN G R+D+ +LS Sbjct: 210 PQERQGFGEMLQAVPLADSFRHLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLP 269 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 L ++I +K G SDH P+ + L + Sbjct: 270 ALCDSKIRSKALG----SDHCPITLYLAL 294 >gi|12247526|gb|AAG49922.1|AF311054_1 APEX [Rattus norvegicus] Length = 289 Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats. Identities = 66/269 (24%), Positives = 112/269 (41%), Gaps = 40/269 (14%) Query: 2 SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN----YH 56 + + + +WNV+ +RA I W+KE PDI+CLQETK + P E + Y Sbjct: 54 ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLTHQYW 113 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 ++ Y+GV +LS+ P+++ + + + R Sbjct: 114 SAPSDKEGYSGVGLLSRQCPLKVSYGIAYVPNAGRGLVRLEYRQRWDEAFR--------- 164 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + L +PL+ GD N+ + D NP + +A FT Sbjct: 165 --------------------KFLKDLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 204 Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E + + LQ + D+ R + + Y+FW Y ++ SKN G R+D+ +LS Sbjct: 205 PQERQGFGEMLQAVPLADSFRHLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLP 264 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 L ++I +K G SDH P+ + L + Sbjct: 265 ALCDSKIRSKALG----SDHCPITLYLAL 289 >gi|227497368|ref|ZP_03927600.1| possible exodeoxyribonuclease III [Actinomyces urogenitalis DSM 15434] gi|226833239|gb|EEH65622.1| possible exodeoxyribonuclease III [Actinomyces urogenitalis DSM 15434] Length = 274 Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats. Identities = 50/275 (18%), Positives = 89/275 (32%), Gaps = 16/275 (5%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +AT NVN IRA + W++ + PD++ LQE + D+ L + I C Sbjct: 1 MRIATVNVNGIRAAARKGMGTWLEASAPDVLLLQEVRA-DEETAAALLPGYSSLIWPCRI 59 Query: 63 KSYNGVAILSKYQPI------------EIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 K GV + + + ++ +A + Sbjct: 60 KGRAGVGVAVREGGPVRLGESRYGVAGQAEEPDVDSGRWLEVDLADADAQTVLTVVSAYL 119 Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170 G KY R + ++ AGD N++ D N Sbjct: 120 HSGQIGTEKMDQKYAHLELVDTRMGELLASAQAGGPQVVMAGDLNVVRSERDIKNWKPNH 179 Query: 171 NDACF--TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 N E+ + A + Y++W ++ + G RID+ + Sbjct: 180 NKVAGVLDEEIAHLEGWFASGWVDVARHLEPEAQGPYTWWSQRGKAFDNDAGWRIDYQVA 239 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +P SA +D + SDH P++V + Sbjct: 240 TPSLAGRAVSAVVDRAASYAEQWSDHAPLVVEYQL 274 >gi|257070188|ref|YP_003156443.1| exodeoxyribonuclease III Xth [Brachybacterium faecium DSM 4810] gi|256561006|gb|ACU86853.1| exodeoxyribonuclease III Xth [Brachybacterium faecium DSM 4810] Length = 308 Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats. Identities = 60/308 (19%), Positives = 107/308 (34%), Gaps = 48/308 (15%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ +AT N+N IRA W+ E D+I LQE + + + P + + ++T Sbjct: 1 MLRIATANINGIRAAHRRGFGHWLAERGCDVIALQEVRAQAEKIPADAFGDHHVALDTGT 60 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDD--------------------------LDVQARFI 95 NGVA+L++ P + T + Sbjct: 61 LPGRNGVAVLTREPPAAVRTWSGTALVGGPASGGPALAEVPASDHVPLTRGLGPFVDQGR 120 Query: 96 EATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL----------- 144 + L I +LYLP G + +++ ++++ Sbjct: 121 YLEVDLADAPLTIASLYLPKGGLPAHLQRPERMREAPDGGARYARKMGFMAAFARHLTRT 180 Query: 145 -------EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA 197 + GD NI D +N+ F E R+ + + Sbjct: 181 RRAAAAQGRQFLLMGDLNIAHTRQDLAAWRRNQNNDGFLPEEREWLGAQLSPRTLVDVVR 240 Query: 198 --THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHT 255 YS+W + S++K+ G RID+ + +P A +D + RG + SDH Sbjct: 241 RLHPQEDGPYSWWSWLGQSFAKDAGWRIDYHLATPRLARSALRAEVDREVRG-VRLSDHA 299 Query: 256 PVIVSLDI 263 PV+V D+ Sbjct: 300 PVVVDYDL 307 >gi|13540877|ref|NP_110565.1| exonuclease III [Thermoplasma volcanium GSS1] gi|14324259|dbj|BAB59187.1| exodeoxyribonuclease [Thermoplasma volcanium GSS1] Length = 252 Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats. Identities = 69/262 (26%), Positives = 114/262 (43%), Gaps = 18/262 (6%) Query: 5 TVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG-- 61 +WNVN +RA I I+ + I +QETK + K+ P E L YH+ Sbjct: 6 KFLSWNVNGLRAVIKSGGLDLIRNGDYFAIAMQETKVDVKSVPEEMYH-LGYHVYNNPAK 64 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G LS+ +PI++ ++ + + N Y P+ + Sbjct: 65 RKGYSGTMTLSREKPIDVSYGFESEEGRILN--------LEFDNFYFINAYFPNSQHGLT 116 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 D + + L ++PLI GD+N+ + D P E++A FT+E R Sbjct: 117 RL--DLKLDFDKKFLGYANDLRKKKPLIICGDFNVAHEEIDIARPKDNEHNAGFTIEERT 174 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 + + G+ D R YS+W Y ++ KN G RID+ ++S + + ++RI Sbjct: 175 WMSQFLSSGYVDTFRLFTTDGGHYSWWSYRFNAREKNIGWRIDYFVVSDDIKDKVKASRI 234 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 K SDH PV + +DI Sbjct: 235 LENV----KGSDHAPVELEIDI 252 >gi|229586510|ref|YP_002845011.1| Exodeoxyribonuclease III [Rickettsia africae ESF-5] gi|228021560|gb|ACP53268.1| Exodeoxyribonuclease III [Rickettsia africae ESF-5] Length = 271 Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats. Identities = 78/269 (28%), Positives = 123/269 (45%), Gaps = 7/269 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62 + + TWN+NS+R RI L E+ PDII LQETK D FP E ++++ Y H+ GQ Sbjct: 1 MKIVTWNINSLRLRIDLLRKLAYEHKPDIILLQETKVADSLFPLEVIKNIGYEHVIYSGQ 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 KSYNGVAI+SK+ + + + I I+ + + +T Sbjct: 61 KSYNGVAIISKFPLNNVFSLELYNSDKRHIAAIVNDIEIHNFYV---PAGGDIPDIEVNT 117 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K+ K+ +++ + + + +I GD NI P HD ++ N T R Sbjct: 118 KFKHKLEYVRLMQEWLTTNRTKNDKMIIVGDLNIAPHEHDVWSSKQLRNVISHTDIERSL 177 Query: 183 FQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLLHSA 239 +LQN + Y++W Y W K N+G R+DHI +S L S Sbjct: 178 LVELQNALGFIDSSRHFVSLDEKFYTWWSYRNIDWKKSNRGRRLDHIWVSDNLKGALFSM 237 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268 + ++ R W+ PSDH P V+ ++ + Sbjct: 238 HLLSEARDWSSPSDHVPYFVTFNLQMSSR 266 >gi|218665721|ref|YP_002424683.1| exodeoxyribonuclease III [Acidithiobacillus ferrooxidans ATCC 23270] gi|218517934|gb|ACK78520.1| exodeoxyribonuclease III [Acidithiobacillus ferrooxidans ATCC 23270] Length = 253 Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats. Identities = 62/262 (23%), Positives = 94/262 (35%), Gaps = 12/262 (4%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETC 60 + + +WNVN RA L W+ D +C QE K + P Y Sbjct: 1 MRLYSWNVNGWRAACRKGLREWVATVQADALCFQEIKADPDRLPATETALDGYDARWAVA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + Y+GVA S+ + T L D + R + Sbjct: 61 ERPGYSGVATFSRAPCRPLTTGLGIPRFDREGRVVVTDCGDFDLY-----NVYFPNGKKD 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + + K+ + FL + R+ ++F GD N Q D P + F E R Sbjct: 116 TERLAFKLDFYAAFLELINARVAAGRAVVFCGDVNTAHQAIDLARPKENARISGFLPEER 175 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + G+ D+ R H YS+W D+ ++N G R+D+ + L A Sbjct: 176 ACLDQWAAAGWVDSFRHLHPDAVEYSWWSQRTDARARNIGWRLDYFWIHESLLPRLRGAG 235 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I T G SDH PV + LD Sbjct: 236 IATDVTG----SDHCPVWLELD 253 >gi|94309094|ref|YP_582304.1| exodeoxyribonuclease III (xth) [Cupriavidus metallidurans CH34] gi|93352946|gb|ABF07035.1| Exodeoxyribonuclease III [Cupriavidus metallidurans CH34] Length = 258 Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats. Identities = 57/266 (21%), Positives = 115/266 (43%), Gaps = 13/266 (4%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IET 59 ++ + + N+N IR+ W+ + D++C+QE K ++ + L YH Sbjct: 1 MLRIISANLNGIRSASKKGFFEWMGKQEADMVCVQELKAQEADMTEAFLAPHGYHGYFHY 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GV + ++++P ++ + D + R++E + L + ++Y+P G+ Sbjct: 61 AEKKGYSGVGLYTRHKPERVIIGFGNTEFDAEGRYVE----VQYPHLAVISVYVPSGSSS 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K +++ FL + ++ GD NI + D N ++ F E Sbjct: 117 EERQQA-KFRFMEAFLPHLLELKASGREIVLCGDVNIAHKEIDIKNWKGNLKNSGFLPEE 175 Query: 180 RQSFQK-LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R + N G+ D R Y++W +++KN G RID+ + + + + + Sbjct: 176 RAWIGELFDNHGYVDVFRQLDPRPEQYTWWSNRGQAYAKNVGWRIDYHLTTAKIAATAKA 235 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIP 264 I K SDH P+ + D P Sbjct: 236 TSIYKD----EKFSDHAPLSIDYDFP 257 >gi|28572478|ref|NP_789258.1| exodeoxyribonuclease III [Tropheryma whipplei TW08/27] gi|28410610|emb|CAD66996.1| exodeoxyribonuclease III [Tropheryma whipplei TW08/27] Length = 279 Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats. Identities = 77/281 (27%), Positives = 124/281 (44%), Gaps = 14/281 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V TWNVNSIRAR+ + AW+K D+ LQETK +FP + + Y+ E G + Sbjct: 1 MRVGTWNVNSIRARLERVLAWLKNECIDVAALQETKVRTGDFPVDAFRDAGYYSEAHGLR 60 Query: 64 SYNGVAILSKYQPIEIV------THLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 + GVAI+S++ + D + T +R+ +LY+P+G Sbjct: 61 GFEGVAIVSRFPIRRVTVNIPRAPGFLSDRWGTDIPQEARAISATTGGIRLYSLYVPNGR 120 Query: 118 PITSTKYDDKISWIKRFLRFASQRLE--LEEPLIFAGDYNIIPQPHDCY-NPIIWENDAC 174 + S ++ K++W+K L PL+ GD+NI+ D ND Sbjct: 121 EVGSPHFEYKLAWLKALASHVRTVLRRTPGIPLMLVGDFNIVTCEQDTADPDFQLPNDIT 180 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 + R++FQ + + G D IR ++ W Y + N+G+RID ++ S Sbjct: 181 CSGPEREAFQAILDTGMFDLIRPFAPIG--FTSWSYQRQRFQNNQGLRIDFMLGSDSVQR 238 Query: 235 LLHSARIDTKPRG---WTKPSDHTPVIVSLDIPEPRKKQQD 272 ID R PSDH P++ +D P ++ D Sbjct: 239 RTIWGEIDRVQRRHLFGLTPSDHAPLVSVIDPPRRTFRRDD 279 >gi|167957331|ref|ZP_02544405.1| exonuclease III [candidate division TM7 single-cell isolate TM7c] Length = 265 Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats. Identities = 71/270 (26%), Positives = 110/270 (40%), Gaps = 15/270 (5%) Query: 4 VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + +WNVN IRA I +I E PDI+CLQETK + + L + Sbjct: 1 MRLYSWNVNGIRAVIKKGTFLPFISEYQPDILCLQETKAKKNQVEID-LPDYFEIWNSAE 59 Query: 62 QKSYNGVAILSKYQPIEIV--------THLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 + Y+G AI SK +P+ D D E I Sbjct: 60 RAGYSGTAIFSKAKPLNTWLDFPEDIVKKYNLDQDDYGNPNNEGRIIAAEFDNFIVATVY 119 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + ++ + + ++LE +P++F GD N+ D NP Sbjct: 120 TPNSKGDLSRLQLRHQKWDKAWLEYMKKLESIKPVLFCGDLNVAHTEDDLANPKPNIGKH 179 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 FT E R F GF D R + YS+W ++A++ ++N G RID+ + S + Sbjct: 180 GFTNEERAGFDAFIQSGFKDTFRIFTKGNGYYSWWTHWANARARNIGWRIDYWLASEKLA 239 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + + A+I G SDH PV V++DI Sbjct: 240 NKITEAQIHPDIMG----SDHCPVSVTIDI 265 >gi|198282493|ref|YP_002218814.1| exodeoxyribonuclease III Xth [Acidithiobacillus ferrooxidans ATCC 53993] gi|198247014|gb|ACH82607.1| exodeoxyribonuclease III Xth [Acidithiobacillus ferrooxidans ATCC 53993] Length = 255 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 66/262 (25%), Positives = 101/262 (38%), Gaps = 12/262 (4%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETC 60 + + +WNVN RA L W+ D +C QE K + P Y Sbjct: 3 MRLYSWNVNGWRAACRKGLREWVATVQADALCFQEIKADPDRLPATETALDGYDARWAVA 62 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + Y+GVA S+ + T L D + R + + N+Y P+G Sbjct: 63 ERPGYSGVATFSRAPCRPLTTGLGIPRFDREGRVVVTDCG----DFDLYNVYFPNGK-KD 117 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + + K+ + FL + R+ ++F GD N Q D P + F E R Sbjct: 118 TERLAFKLDFYAAFLELINARVAAGRAVVFCGDVNTAHQAIDLARPKENARISGFLPEER 177 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + G+ D+ R H YS+W D+ ++N G R+D+ + L A Sbjct: 178 ACLDQWAAAGWVDSFRHLHPDAVEYSWWSQRTDARARNIGWRLDYFWIHESLLPRLRGAG 237 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I T G SDH PV + LD Sbjct: 238 IATDVTG----SDHCPVWLELD 255 >gi|189183086|ref|YP_001936871.1| exodeoxyribonuclease III [Orientia tsutsugamushi str. Ikeda] gi|189183300|ref|YP_001937085.1| exodeoxyribonuclease III [Orientia tsutsugamushi str. Ikeda] gi|189179857|dbj|BAG39637.1| exodeoxyribonuclease III [Orientia tsutsugamushi str. Ikeda] gi|189180071|dbj|BAG39851.1| exodeoxyribonuclease III [Orientia tsutsugamushi str. Ikeda] Length = 261 Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats. Identities = 80/263 (30%), Positives = 115/263 (43%), Gaps = 7/263 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62 + + TWN+NSIR RI L + NPDII LQETK EDK FP +L Y +I GQ Sbjct: 1 MKIITWNINSIRIRIPLLQKLVHLYNPDIIALQETKVEDKLFPVTECINLGYKYITYSGQ 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 KSYNGVAILS+ +D +I+ + + + Sbjct: 61 KSYNGVAILSRISFESTFAINLYNDEKRHIAINIGELSIHNFYV---PSGGDIPDANVNI 117 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K+ K+ ++ + ++ +I GD NI P D ++ N T R+ Sbjct: 118 KFKHKLCYVDFMNAWFLNNKSKKDKIILLGDLNIAPLESDVWSSYQLRNVVSHTDIERKK 177 Query: 183 FQKLQ--NMGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLLHSA 239 + LYS+W Y WSK ++G R+DHI +S S + S Sbjct: 178 LMHNITSFDWIDAVRFFSGKHEKLYSWWSYRNVDWSKSDRGRRLDHIWISHHLESKIKSC 237 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 I RGW PSDH PV++ ++ Sbjct: 238 IIIKDARGWDMPSDHVPVMLEIE 260 >gi|189238676|ref|XP_969559.2| PREDICTED: similar to ap endonuclease [Tribolium castaneum] Length = 1246 Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats. Identities = 62/262 (23%), Positives = 106/262 (40%), Gaps = 14/262 (5%) Query: 6 VATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64 + TWNV+ +R+ + +K + PDI+C+QETK P E Y C Sbjct: 995 ITTWNVDGLRSWLKKGCLDILKYDKPDILCIQETKCAVYKLPEEVKTIEGYETLWCCSDK 1054 Query: 65 --YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 Y GV I+ K +P+ ++ + + D + R I + + G + + Sbjct: 1055 DGYAGVGIMVKDKPLNVIYGIDSKEHDTEGRCITVEYETF---FVVNVYVPHAGRNLVTL 1111 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K + L+ ++P+I GD N+ + D NP N A F++E R Sbjct: 1112 P---KRLDWNEQFEKFIKNLDSQKPVIICGDMNVAHKEIDLANPKTNTNSAGFSVEERDG 1168 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 G+ D R + Y+FW Y ++ N G R+D+ ++S + I Sbjct: 1169 MTAFLGNGYVDIYRHLYPEKEKAYTFWIYMRNARPNNVGWRLDYFLVSQRFVDNVCDNII 1228 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 + G SDH P+ + + I Sbjct: 1229 HSDVMG----SDHCPLSLHIQI 1246 >gi|330843681|ref|XP_003293776.1| hypothetical protein DICPUDRAFT_9650 [Dictyostelium purpureum] gi|325075853|gb|EGC29694.1| hypothetical protein DICPUDRAFT_9650 [Dictyostelium purpureum] Length = 249 Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats. Identities = 65/257 (25%), Positives = 116/257 (45%), Gaps = 11/257 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQ-SLNYHIETCG 61 + V +WNV R+ + + ++ + NPDI+CLQETK + ++ YH + Sbjct: 1 LKVISWNVAGFRSVLTKGFSDYVVKENPDILCLQETKIKPTEVQKSSIPSGYEYHFVSAD 60 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 Q ++G +L+K +P+ + + D + R I A + + N Y+P+ Sbjct: 61 QAGHHGTGLLTKLKPLSLKFGIGIAKHDTEGRVITAEYD----DFYLVNTYIPNSGSRGL 116 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 D +I + L+ ++P+++ GD N+ D NP A FT++ R Sbjct: 117 KNLDYRIKEWDVDFQKYLVELDKKKPVVWCGDLNVAHTEIDLKNPKTNTKSAGFTIQERT 176 Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 SF N GF D+ R + ++FW Y + +KN G R+D+ ++S + + Sbjct: 177 SFGDFLNKGFIDSYRHYNPGKEGAFTFWTYMGGARAKNVGWRLDYFVVSKRYIDSIKTPF 236 Query: 241 IDTKPRGWTKPSDHTPV 257 I + G SDH P+ Sbjct: 237 IRSTVMG----SDHCPI 249 >gi|255020174|ref|ZP_05292243.1| Exodeoxyribonuclease III [Acidithiobacillus caldus ATCC 51756] gi|254970316|gb|EET27809.1| Exodeoxyribonuclease III [Acidithiobacillus caldus ATCC 51756] Length = 253 Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats. Identities = 62/262 (23%), Positives = 99/262 (37%), Gaps = 12/262 (4%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETC 60 + + +WNVN RA H L W+ D++C+QETK + + Q +H Sbjct: 1 MRLYSWNVNGWRAVTRHGLREWVAATPMDVLCVQETKVQLAQLDPDEAQLPGFHSLWAEA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + Y+GVA + + L D D + R + Sbjct: 61 ERPGYSGVATFFRDPCTAVRAQLGRADFDAEGRVVVTDCGDFDLY-----NVYFPNGKKD 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + + K+ + FL + + +IF GD N P D P + F E R Sbjct: 116 AQRLAFKLDFYAFFLEQVTALVRRGRSVIFCGDVNTAHTPLDLARPEANRRVSGFLPEER 175 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + + GF D+ R H YS+W + + ++ G R+D+ + L A Sbjct: 176 AWLDRWREAGFIDSFRHFHPEERRYSWWSLRSGARERDVGWRLDYFWVHESLLPRLKGAG 235 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I T+ RG DH PV + LD Sbjct: 236 IATEVRGA----DHCPVWLELD 253 >gi|229489432|ref|ZP_04383295.1| exodeoxyribonuclease III [Rhodococcus erythropolis SK121] gi|229323529|gb|EEN89287.1| exodeoxyribonuclease III [Rhodococcus erythropolis SK121] Length = 281 Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats. Identities = 67/268 (25%), Positives = 112/268 (41%), Gaps = 15/268 (5%) Query: 5 TVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNF--PFETLQSLNYHIETCG 61 T+ + NVN +RA + W+++ + D ICLQET+ D E + + + Sbjct: 17 TITSVNVNGVRAAARKGMLDWLEKTSADFICLQETRASDDQLRETLEPALGKGWFLVSAE 76 Query: 62 Q--KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 K NGVA+LS+ +P + D+ R+IEA F L + +LYLP G + Sbjct: 77 PSAKGRNGVAVLSRTEPDAVRIGHGDDEFLDAGRYIEADFA----DLTVASLYLPSGEAL 132 Query: 120 TSTKYD---DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 T + + S+ A+ + ++ +GD+NI D N + + F Sbjct: 133 TPKQEEKERFMASFAVHLASTAAAAEAADRHVVVSGDWNIAHTELDLKNWKTNKKSSGFL 192 Query: 177 LEVRQSFQ--KLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 E R ++ + D R H YS+W Y ++ + G RID+ + + Sbjct: 193 PEERAWMDLLFAEDSAWVDVFRTLHPGVDGPYSWWSYRGKAFDNDSGWRIDYQVATRGYA 252 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSL 261 A ++ + SDH PV VS Sbjct: 253 ERAKVALVERAEAYDLRWSDHAPVTVSY 280 >gi|226467620|emb|CAX69686.1| APEX nuclease [Schistosoma japonicum] Length = 319 Score = 163 bits (411), Expect = 3e-38, Method: Composition-based stats. Identities = 69/264 (26%), Positives = 105/264 (39%), Gaps = 13/264 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFET-LQSLNYHIETCG 61 + + +WNVN IRA I +IK+ N DI C+QETK P E L S + Sbjct: 65 LKLVSWNVNGIRAVIKNGGMEYIKKENADIFCIQETKCPLHKIPSEAKLPSYQSFWSSAD 124 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 + Y G A+ SK P ++ + D + R I A F + Y+P+ Sbjct: 125 KAGYAGTALFSKIAPKKVTYGIGRKVHDEEGRVITAEFD----RFYLVTAYVPNAGQ-GL 179 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + + ++L+ +P+I GD N+ + D P A FT + R Sbjct: 180 ARLPYREKEWDPDFLEYLRKLDATKPVIVCGDLNVAHEEIDLARPDTNHKTAGFTDQERS 239 Query: 182 SFQK--LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 F K D YSFW Y + N G R+D+ ++S + + Sbjct: 240 GFTKLLSSANLIDTYRHFYPDRREAYSFWSYRTGARLINNGWRLDYFLVSQRILANVG-- 297 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 D + R SDH PV++ L I Sbjct: 298 --DQEIRCGVTGSDHCPVVLYLHI 319 >gi|148284900|ref|YP_001248990.1| exodeoxyribonuclease III [Orientia tsutsugamushi str. Boryong] gi|148285144|ref|YP_001249234.1| exodeoxyribonuclease III [Orientia tsutsugamushi str. Boryong] gi|146740339|emb|CAM80757.1| exodeoxyribonuclease III [Orientia tsutsugamushi str. Boryong] gi|146740583|emb|CAM81209.1| exodeoxyribonuclease III [Orientia tsutsugamushi str. Boryong] Length = 261 Score = 163 bits (411), Expect = 3e-38, Method: Composition-based stats. Identities = 80/263 (30%), Positives = 116/263 (44%), Gaps = 7/263 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62 + + TWN+NSIR RIH L + NPDII LQETK ED+ FP +L Y +I GQ Sbjct: 1 MKIITWNINSIRIRIHLLQKLVHLYNPDIIALQETKVEDRLFPVTECINLGYKYITYSGQ 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 KSYNGVAILS+ +D +I+ + + + Sbjct: 61 KSYNGVAILSRISFESTFVINLYNDEKRHIAINIGELSIHNFYV---PAGGDIPDANVNI 117 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K+ K+ ++ + ++ +I GD NI P D ++ N T R+ Sbjct: 118 KFKHKLCYVDFMNAWFLNNKSKKDKIILLGDLNIAPLESDVWSSYQLRNVVSHTDIERKK 177 Query: 183 FQKLQ--NMGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLLHSA 239 + LYS+W Y WSK ++G R+DHI +S S + S Sbjct: 178 LMHNITSFDWIDAVRFFSGKHEKLYSWWSYRNIDWSKSDRGRRLDHIWISHPLESKIKSC 237 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 I RGW PSDH PV++ ++ Sbjct: 238 IIIKDARGWDMPSDHVPVMLEIE 260 >gi|291516724|emb|CBK70340.1| exodeoxyribonuclease III [Bifidobacterium longum subsp. longum F8] Length = 286 Score = 163 bits (411), Expect = 3e-38, Method: Composition-based stats. Identities = 64/286 (22%), Positives = 104/286 (36%), Gaps = 26/286 (9%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI---- 57 +T+ T NVN IRA + W ++ PD+ C+QE + ++ + Sbjct: 2 TITITTSNVNGIRAAKRKGIEDWAGKHAPDVWCMQEVRAPQEDVDS-IFGEFGFEYATAG 60 Query: 58 ------------ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR--FIEATFTINT 103 E C K GV +L+ + + LPG DV + T Sbjct: 61 KIASPSDLHSLNEVCRVKGRAGVGLLTDLEVTDKRYGLPGLGEDVDSGRWIETDVKTPQG 120 Query: 104 QTLRIGNLYLPHGNPIT----STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159 T+ + +Y+ GN KY + + R + + + GD+NI Sbjct: 121 YTITVACVYVHAGNTDDSTKMEQKYRFLDTMLTRMGELRDEAAHGGKQAVLCGDFNIAHT 180 Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSWSK 217 P D N E A F E R K + + + D Y++W ++ Sbjct: 181 PLDIKNAKANEKHAGFLPEERAYVDKWLDEYEFVDVMRSLAGDIQGPYTWWSQRGRAFDN 240 Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 N G RID+ +PE ID P + SDH P+ ++ D+ Sbjct: 241 NVGWRIDYQFATPELAETARGFVIDKAPTYELRWSDHAPLTITYDV 286 >gi|71275880|ref|ZP_00652163.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Xylella fastidiosa Dixon] gi|71901393|ref|ZP_00683486.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Xylella fastidiosa Ann-1] gi|170729372|ref|YP_001774805.1| DNA-(apurinic or apyrimidinic site) lyase [Xylella fastidiosa M12] gi|71163257|gb|EAO12976.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Xylella fastidiosa Dixon] gi|71728852|gb|EAO30990.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Xylella fastidiosa Ann-1] gi|167964165|gb|ACA11175.1| DNA-(apurinic or apyrimidinic site) lyase [Xylella fastidiosa M12] Length = 266 Score = 163 bits (411), Expect = 3e-38, Method: Composition-based stats. Identities = 44/270 (16%), Positives = 82/270 (30%), Gaps = 18/270 (6%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + ++++N N +R+ + W + D++C+QETK + YH+ Sbjct: 1 MRISSFNANGLRSALSKGFFGWFSTQDIDVLCVQETKAQRHQLVGPDFFPAGYHVCFRDA 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 G + ++ Y E + + Sbjct: 61 TIKKGYSGVAIYSRCEPDELRTTLGWAEFDEEGRYVEARFGNLSVV--SFYIPSGSSGEK 118 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + K ++ + L + GD+NI+ D N + ++ R Sbjct: 119 RQHYKFEVMRWLRPILCEWLLSGRDYVLCGDWNIVRSALDIRNWKSNQKNSGCLPLERDW 178 Query: 183 FQKLQNMG-----------FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 L + D R H Y++W + N G RID+ +SP Sbjct: 179 LNGLCADSLHDVNSAQGRGWVDTYRVLHPQGEDYTWWSNRGAARVNNVGWRIDYQFVSPG 238 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + I + R SDH+P V Sbjct: 239 LRERVSRCAIYCEQR----FSDHSPYTVEY 264 >gi|319790980|ref|YP_004152620.1| exodeoxyribonuclease iii xth [Variovorax paradoxus EPS] gi|315593443|gb|ADU34509.1| exodeoxyribonuclease III Xth [Variovorax paradoxus EPS] Length = 267 Score = 163 bits (411), Expect = 3e-38, Method: Composition-based stats. Identities = 63/270 (23%), Positives = 112/270 (41%), Gaps = 16/270 (5%) Query: 3 VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFP--FETLQSLNYHIET 59 + + + N+N +R A +A W+ E PD IC+QE + + + FE + L H Sbjct: 1 MFKLTSLNLNGLRSAATKGVADWVAELAPDCICMQEIRVQASDIEGRFEEMAGLKGHFHF 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y G AI +K+ P +++ + D + R++E F + + + Y P G+ Sbjct: 61 AEKKGYAGTAIYTKHAPSQVIVGWGDAEFDAEGRYLELRFDTPKRKFSVISCYFPSGSSG 120 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + + L+ E + GD NI Q D N + ++ F E Sbjct: 121 EERQLA--KFRFLKGFFPHLVALKKEREFVLCGDINIAHQQIDLKNWRSNQKNSGFLPEE 178 Query: 180 RQSFQKLQNMGFTD-------AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 R KL + G + T Y++W +++ N G R+D+ + +P+ Sbjct: 179 RAWMTKLLDAGAEGAGLVDVYRMLKPETTDEAYTWWSNRGQAYANNVGWRLDYHLATPKT 238 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 +L + +I K SDH P+ V D Sbjct: 239 AALARTEQIFKTI----KFSDHAPITVDYD 264 >gi|169837263|ref|ZP_02870451.1| exonuclease III [candidate division TM7 single-cell isolate TM7a] Length = 267 Score = 163 bits (411), Expect = 3e-38, Method: Composition-based stats. Identities = 71/270 (26%), Positives = 110/270 (40%), Gaps = 15/270 (5%) Query: 4 VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + +WNVN IRA I +I E PDI+CLQETK + + L + Sbjct: 3 MRLYSWNVNGIRAVIKKGTFLPFISEYQPDILCLQETKAKKNQVEID-LPDYFEIWNSAE 61 Query: 62 QKSYNGVAILSKYQPIEIV--------THLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 + Y+G AI SK +P+ D D E I Sbjct: 62 RAGYSGTAIFSKAKPLNTWLDFPEDIVKKYNLDQDDYGNPNNEGRIIAAEFDNFIVATVY 121 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + ++ + + ++LE +P++F GD N+ D NP Sbjct: 122 TPNSKGDLSRLQLRHQKWDKAWLEYMKKLESIKPVLFCGDLNVAHTEDDLANPKPNIGKH 181 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 FT E R F GF D R + YS+W ++A++ ++N G RID+ + S + Sbjct: 182 GFTNEERAGFDAFIQSGFKDTFRIFTKGNGYYSWWTHWANARARNIGWRIDYWLASEKLA 241 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + + A+I G SDH PV V++DI Sbjct: 242 NKITEAQIHPDIMG----SDHCPVSVTIDI 267 >gi|305680645|ref|ZP_07403453.1| putative exodeoxyribonuclease III [Corynebacterium matruchotii ATCC 14266] gi|305660176|gb|EFM49675.1| putative exodeoxyribonuclease III [Corynebacterium matruchotii ATCC 14266] Length = 298 Score = 163 bits (411), Expect = 3e-38, Method: Composition-based stats. Identities = 79/273 (28%), Positives = 119/273 (43%), Gaps = 20/273 (7%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A WNVNS+R R+ + A + + D++ +QETK +DK FPF+ Y I G Sbjct: 1 MRIANWNVNSVRTRVDRIVAALARLDIDVLLVQETKCKDKQFPFDAFP--GYEIAHHGLN 58 Query: 64 SYNGVAILSKYQPIEIVTHLPGDD-----LDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 +NGVAILS+ +I T P + + +R+ +LY+P+G Sbjct: 59 QWNGVAILSRVGLADIQTSFPHQPGFAKDPKKPQNLEARAISADCGGVRVWSLYVPNGRA 118 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLI-----FAGDYNIIPQPHDCYNPIIWENDA 173 I YD K+ W+ R + E GD+NI P + ++ + + Sbjct: 119 IADRHYDYKLRWLDALARHVEDQAGDPEQPSSQPLVLGGDFNIAPTDANVWDITAFIDHT 178 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 T RQ+F L G T + YS+WDY A + KN+G+ ID + Sbjct: 179 HVTEAERQAFAGLIEAGLTVTSPTSG-----YSYWDYKAGRFPKNEGMLIDFQLA-RGL- 231 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEP 266 + ID R T SDH PV+V D P Sbjct: 232 -HATGSFIDVAERSGTGASDHAPVVVDYDYDAP 263 >gi|226953375|ref|ZP_03823839.1| exodeoxyribonuclease III [Acinetobacter sp. ATCC 27244] gi|226835913|gb|EEH68296.1| exodeoxyribonuclease III [Acinetobacter sp. ATCC 27244] Length = 274 Score = 163 bits (411), Expect = 3e-38, Method: Composition-based stats. Identities = 62/267 (23%), Positives = 111/267 (41%), Gaps = 7/267 (2%) Query: 2 SVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIET 59 ++ V + NVN +RA + L W+++++ D++C+QE++ + + + Y H+ Sbjct: 12 KILRVVSINVNGLRASVTKGLLEWLEQSDADVVCMQESRITHEQWTDKFKPEGWYTHLFP 71 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 + Y G AI S+ + + L + D Q RFI A F + Sbjct: 72 AERAGYAGTAIYSRLPFVSVTNGLGFELADSQGRFITAEFDLGLSHPVHIASLYLPSGSS 131 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-E 178 K +++ + + Q + + +I GDYNI+ + D N + + E Sbjct: 132 GDEAQARKDIFLEEYAKILKQWRDENKSIIVCGDYNIVHKRIDIKNWSGNQKSSGVLPHE 191 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 +G+ D R LYS+W + +KN G RID+ SP+ + + Sbjct: 192 RAWLDHIYDELGYVDTFREVRPEAELYSWWSNRGQARAKNVGWRIDYHACSPDWKARTAN 251 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIPE 265 A + + SDH PVI+ I E Sbjct: 252 AWVYKE----QWFSDHAPVIIDYKIHE 274 >gi|23465951|ref|NP_696554.1| exodeoxyribonuclease [Bifidobacterium longum NCC2705] gi|322689435|ref|YP_004209169.1| exodeoxyribonuclease [Bifidobacterium longum subsp. infantis 157F] gi|322691402|ref|YP_004220972.1| exodeoxyribonuclease [Bifidobacterium longum subsp. longum JCM 1217] gi|23326663|gb|AAN25190.1| possible exodeoxyribonuclease [Bifidobacterium longum NCC2705] gi|320456258|dbj|BAJ66880.1| putative exodeoxyribonuclease [Bifidobacterium longum subsp. longum JCM 1217] gi|320460771|dbj|BAJ71391.1| putative exodeoxyribonuclease [Bifidobacterium longum subsp. infantis 157F] Length = 286 Score = 163 bits (411), Expect = 4e-38, Method: Composition-based stats. Identities = 64/286 (22%), Positives = 104/286 (36%), Gaps = 26/286 (9%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI---- 57 +T+ T NVN IRA + W ++ PD+ C+QE + ++ + Sbjct: 2 TITITTSNVNGIRAAKRKGIEDWAGKHAPDVWCMQEVRAPQEDVDS-IFGEFGFEYATAG 60 Query: 58 ------------ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR--FIEATFTINT 103 E C K GV +L+ + + LPG DV + T Sbjct: 61 KIASPSDLHSLNEVCRVKGRAGVGLLTDLEVTDKRYGLPGLSEDVDSGRWIETDVKTPQG 120 Query: 104 QTLRIGNLYLPHGNPIT----STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159 T+ + +Y+ GN KY + + R + + + GD+NI Sbjct: 121 YTITVACVYVHAGNTDDSTKMEQKYRFLDTMLTRMGELRDEAAHGGKQAVLCGDFNIAHT 180 Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSWSK 217 P D N E A F E R K + + + D Y++W ++ Sbjct: 181 PLDIKNAKANEKHAGFLPEERAYVDKWLDEYEFVDVMRSLAGDIQGPYTWWSQRGRAFDN 240 Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 N G RID+ +PE ID P + SDH P+ ++ D+ Sbjct: 241 NVGWRIDYQFATPELAETARGFVIDKAPTYELRWSDHAPLTITYDV 286 >gi|224827230|ref|ZP_03700324.1| exodeoxyribonuclease III Xth [Lutiella nitroferrum 2002] gi|224600519|gb|EEG06708.1| exodeoxyribonuclease III Xth [Lutiella nitroferrum 2002] Length = 258 Score = 163 bits (411), Expect = 4e-38, Method: Composition-based stats. Identities = 59/264 (22%), Positives = 114/264 (43%), Gaps = 13/264 (4%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFP--FETLQSLNYHIET 59 ++ + + N+N +R+ W+ + D++C+QE K + + + L + Sbjct: 1 MLRIVSANLNGVRSADKKGFFDWLAGSQADLVCVQELKAQPGDLSPRMQAPDGLTGYFHC 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GV I S+++P +V L +D + R+++ F L + +LYLP G+ Sbjct: 61 AEKKGYSGVGIYSRHEPDAVVEGLGIGWIDAEGRYLQLDFG----ELSVVSLYLPSGSSS 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + F+ ++ ++ GD+NI D N ++ F E Sbjct: 117 DERQQVKFDFLDV-FMPHLNELRAAGRDIVICGDWNIAHNEIDLKNWKGNLKNSGFLPEE 175 Query: 180 RQSFQKL-QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R +L G+ D R + Y++W +++K+ G RID+ +++P + Sbjct: 176 RAWMGELLGEGGWHDVWRRLYPEVPGYTWWSNRGQAYAKDVGWRIDYHIVTPSMMECARA 235 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 A + K SDH P+IV D Sbjct: 236 ASVYKD----EKFSDHAPLIVDYD 255 >gi|221120309|ref|XP_002161039.1| PREDICTED: similar to APEX nuclease (multifunctional DNA repair enzyme) 1 [Hydra magnipapillata] Length = 384 Score = 163 bits (411), Expect = 4e-38, Method: Composition-based stats. Identities = 72/277 (25%), Positives = 129/277 (46%), Gaps = 25/277 (9%) Query: 2 SVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQ--------- 51 S + + +WNV ++A + N ++ + +PD++CLQETK + + P + LQ Sbjct: 118 STLKICSWNVAGLKAWVNKNGLNYVIKEDPDVLCLQETKCTENDLPGQVLQMKNGPKVTN 177 Query: 52 --SLNYHIETCG--QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107 + Y++ C +K Y+GV++ K +P+++ L + D + R I A F Sbjct: 178 VSNSGYYMYWCNAEKKGYSGVSLWCKLKPLKVTYGLGIKEHDSEGRLITAEFEKYYI--- 234 Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167 I G + Y + + L+ ++P+I GD+N+ D NP Sbjct: 235 ITTYVPNSGQKLIRLDYRRIWNTDYKNYVGE---LKKKKPVIMCGDFNVAHTEIDIANPN 291 Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHI 226 + +A FT E R F L G+ D R + Y+FW Y ++ SKNKG R+D+ Sbjct: 292 SNKRNAGFTEEERSDFTALLEDGYIDTFRKLNPEKTGAYTFWTYMMNARSKNKGWRLDYF 351 Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +++ + + + I + G SDH P++++L I Sbjct: 352 IVTKDIEDDICDSVIRSSVMG----SDHCPIVLNLAI 384 >gi|308274119|emb|CBX30718.1| Exodeoxyribonuclease [uncultured Desulfobacterium sp.] Length = 263 Score = 162 bits (410), Expect = 4e-38, Method: Composition-based stats. Identities = 69/267 (25%), Positives = 115/267 (43%), Gaps = 15/267 (5%) Query: 2 SVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFET--LQSLN-YHI 57 ++ + +WNVN +RA I + I+ NPDI+ +QETK ++ + + N Y Sbjct: 5 KLIKLVSWNVNGLRAIIQKDFFGSIQRMNPDIVAIQETKLQEHQRTDKMLSFEDYNSYWS 64 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 + +K Y+GVA ++ P + + D + R +E F N+Y P+G Sbjct: 65 YSTVKKGYSGVATFTRIAPQNVKEGIGNPGYDEEGRILETDFG----DFIFFNVYFPNGQ 120 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + K+++ F + + LI +GDYN D +P E + F Sbjct: 121 M-GDDRLQYKLNFYNDFFAYTDSLKNQGKNLIISGDYNTAHNEIDLTHPKPNEKYSGFLR 179 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL-- 235 R ++ G+ D R + YS+W Y A++ KN G R+D+I +S Sbjct: 180 VERDWMDEIIKRGYVDTFRYFYPEKVKYSWWSYRANARKKNVGWRVDYIFVSRNIIDKGW 239 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262 + ID G SDH PV + L+ Sbjct: 240 VKEPFIDNDIFG----SDHCPVGLVLE 262 >gi|225022084|ref|ZP_03711276.1| hypothetical protein CORMATOL_02117 [Corynebacterium matruchotii ATCC 33806] gi|224945017|gb|EEG26226.1| hypothetical protein CORMATOL_02117 [Corynebacterium matruchotii ATCC 33806] Length = 298 Score = 162 bits (410), Expect = 4e-38, Method: Composition-based stats. Identities = 79/273 (28%), Positives = 119/273 (43%), Gaps = 20/273 (7%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A WNVNS+R R+ + A + + D++ +QETK +DK FPF+ Y I G Sbjct: 1 MRIANWNVNSVRTRVDRIVAALARLDIDVLLVQETKCKDKQFPFDAFP--GYEIAHHGLN 58 Query: 64 SYNGVAILSKYQPIEIVTHLPGDD-----LDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 +NGVAILS+ +I T P + + +R+ +LY+P+G Sbjct: 59 QWNGVAILSRVGLADIQTSFPHQPGFAKDPRKPQNLEARAISADCGGVRVWSLYVPNGRA 118 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLI-----FAGDYNIIPQPHDCYNPIIWENDA 173 I YD K+ W+ R + E GD+NI P + ++ + + Sbjct: 119 IADRHYDYKLRWLDALARHVEDQAGDPEQPSSQPLVLGGDFNIAPTDANVWDITEFIDHT 178 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 T RQ+F L G T + YS+WDY A + KN+G+ ID + Sbjct: 179 HVTEAERQAFAGLIEAGLTVTSPTSG-----YSYWDYKAGRFPKNEGMLIDFQLA-RGL- 231 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEP 266 + ID R T SDH PV+V D P Sbjct: 232 -HATGSFIDVAERSGTGASDHAPVVVDYDYDAP 263 >gi|288959479|ref|YP_003449820.1| exodeoxyribonuclease III [Azospirillum sp. B510] gi|288911787|dbj|BAI73276.1| exodeoxyribonuclease III [Azospirillum sp. B510] Length = 264 Score = 162 bits (410), Expect = 4e-38, Method: Composition-based stats. Identities = 80/265 (30%), Positives = 118/265 (44%), Gaps = 6/265 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62 + +ATWN+NS+R R+ L ++E PD+ICLQETK D +FP L Y H G Sbjct: 1 MRIATWNINSVRMRLDLLLRLMEEERPDVICLQETKVVDADFPLAPLAERGYVHAHIHGM 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 KSYNGVAILS+ D + I + I +P + Sbjct: 61 KSYNGVAILSRLPFSSHDVQHWCGKQDCRHALARLPGGIELHCVYIPAG-GDIPDPAVND 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ- 181 K+ K+ ++ R+ + P++ GD NI P D ++ + T + Sbjct: 120 KFAHKLQFLDEMTRWLGTERTPDRPMVLVGDLNIAPLEQDVWSHKELLSVVSHTPVEVER 179 Query: 182 -SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLLHSA 239 + + R LY++W Y A W + N+G R+DHI ++P L Sbjct: 180 LAAMQASAGWIDAMRRFVPPEEKLYTWWSYRAKDWAASNRGRRLDHIWVTPPLEGALAGI 239 Query: 240 RIDTKPRGWT-KPSDHTPVIVSLDI 263 ++ RGW KPSDH PVIV LD+ Sbjct: 240 KVLRDARGWDPKPSDHVPVIVDLDV 264 >gi|157737072|ref|YP_001489755.1| exodeoxyribonuclease [Arcobacter butzleri RM4018] gi|157698926|gb|ABV67086.1| exodeoxyribonuclease [Arcobacter butzleri RM4018] Length = 262 Score = 162 bits (410), Expect = 5e-38, Method: Composition-based stats. Identities = 63/262 (24%), Positives = 103/262 (39%), Gaps = 8/262 (3%) Query: 5 TVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETL-QSLNYHIETCGQ 62 +WNVN IRA + WI E D++ +QETK+ P + + Sbjct: 6 KFISWNVNGIRAVDKKDALKWIDEIEVDLLGVQETKSMKDQIPKTIFSKEFKTLFASASA 65 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 L + D+ + R E F + + + N+Y P+G + Sbjct: 66 IKGRSGTALFSDIEPTFQSICESVDILDEGRINEVHFNLADKNIAFFNVYFPNGQ-SSQE 124 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + D K+ + RFL + + +I GD N D P EN + F R Sbjct: 125 RLDYKMEFYDRFLNHCENLKKDGKSIIVCGDVNTAHTEIDIARPKANENTSGFLQMERDW 184 Query: 183 FQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 K + G+ D R + D YS+W Y A++ + N G RID+ +S + + A I Sbjct: 185 ITKFLSHGYIDTFRLINGDIKDKYSWWSYRANARANNVGWRIDYFYVSSDLKDYVKDAYI 244 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 G SDH P+ + +++ Sbjct: 245 LDNIEG----SDHCPIGLEMEL 262 >gi|328870805|gb|EGG19178.1| transcription factor IIIC-gamma subunit [Dictyostelium fasciculatum] Length = 1238 Score = 162 bits (410), Expect = 5e-38, Method: Composition-based stats. Identities = 67/267 (25%), Positives = 113/267 (42%), Gaps = 10/267 (3%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPF-ETLQSLNYHIETCG 61 + + +WNV A ++ + PDI+CLQETK P E + YH C Sbjct: 115 IKIVSWNVAGFGACTKKGFKDYLIKEQPDIVCLQETKIAVAKVPKSEIPEGYTYHFNPCI 174 Query: 62 QKS-YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K+ ++G A+L+K +PI I + + D + R + A F + + Sbjct: 175 EKTGHHGTALLTKIKPISITSGIGISKHDQEGRVVTAEFE-DFYVVNAYVPNSGVDRKEP 233 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + + L ++P+++ GD N+ D NP A FT+E R Sbjct: 234 LKRLGYRTKEWDVDFFKYMSDLNTKKPVVWCGDLNVAHTEIDLANPKSNSRTAGFTIEER 293 Query: 181 QSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 SF N GF D R + Y+FW Y + +KN G R+D+ ++ + ++ Sbjct: 294 TSFSGHLNSGFIDTHRHFNPGKTGTYTFWSYMGGARAKNAGWRLDYFIVPATFIGSIAAS 353 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEP 266 I R + SDH P+ + +D+ P Sbjct: 354 FI----RSKVQGSDHCPIGI-IDLENP 375 >gi|229821466|ref|YP_002882992.1| exodeoxyribonuclease III Xth [Beutenbergia cavernae DSM 12333] gi|229567379|gb|ACQ81230.1| exodeoxyribonuclease III Xth [Beutenbergia cavernae DSM 12333] Length = 269 Score = 162 bits (410), Expect = 5e-38, Method: Composition-based stats. Identities = 55/267 (20%), Positives = 100/267 (37%), Gaps = 5/267 (1%) Query: 2 SVVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 V++VAT NVN IRA + W+ + PD++ LQE + D+ + + Sbjct: 3 RVLSVATVNVNGIRAAYRRGMGEWLAKREPDVLLLQELRAPDETVHQLLGEGWHIAHAAS 62 Query: 61 GQKSYNGVAILSKYQPIEIVTH---LPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 K GVA+ S+ + D+ R+IEA + H Sbjct: 63 DAKGRAGVAVASRLPVTAVRIGLGDGVTDEAIDTGRWIEADVQLPAGDTVTTASLYLHSA 122 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + + K ++++R + AGD N+ + D N A F Sbjct: 123 TVGTPSLAAKYAYLERVTTRMGDLASRGGFAVVAGDVNVAHRELDIRNWKGNLRSAGFLP 182 Query: 178 EVR-QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 E R + + A + Y++W + ++ + G RID+ + + + + Sbjct: 183 EERGYLDRWFADGWVDVARAQAGEVDGPYTWWSWRGKAFDNDAGWRIDYQIATSDLAARA 242 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263 A +D + SDH P+ V+ D+ Sbjct: 243 VEAVVDRASSYAERFSDHAPLAVAYDL 269 >gi|157803480|ref|YP_001492029.1| exodeoxyribonuclease III [Rickettsia canadensis str. McKiel] gi|157784743|gb|ABV73244.1| exodeoxyribonuclease III [Rickettsia canadensis str. McKiel] Length = 273 Score = 162 bits (410), Expect = 5e-38, Method: Composition-based stats. Identities = 76/274 (27%), Positives = 119/274 (43%), Gaps = 7/274 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62 + + TWN+NS+R RI L E+ PDII LQETK D FP E ++++ Y HI GQ Sbjct: 1 MKIVTWNINSLRLRIDLLRKLAHEHKPDIILLQETKVADSLFPLEVIKNIGYEHIIYSGQ 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 KSYNGVAI+SK+ + + + ++ + + + Sbjct: 61 KSYNGVAIISKFPLNNVFSLELYNSDKRHIAATVNDIEVHNFYV---PAGGDIPDIEINL 117 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K+ K+ +++ + + + +I GD NI P HD ++ N T R Sbjct: 118 KFKHKLEYVRLMQEWLTVNRTKNDKIIIVGDLNIAPHEHDVWSSRQLRNVISHTDIERSL 177 Query: 183 FQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLLHSA 239 LQN + Y++W Y W K N+G R+DHI +S L S Sbjct: 178 LVGLQNSLGFIDSSRHFISLDEKFYTWWSYRNIDWKKSNRGRRLDHIWVSNNLKDALFSI 237 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDS 273 + ++ R W PSDH P V+ + + + Sbjct: 238 NLLSEARDWVPPSDHVPYFVNFNFDGVMPRACNR 271 >gi|319761098|ref|YP_004125035.1| exodeoxyribonuclease iii xth [Alicycliphilus denitrificans BC] gi|330822956|ref|YP_004386259.1| exodeoxyribonuclease III Xth [Alicycliphilus denitrificans K601] gi|317115659|gb|ADU98147.1| exodeoxyribonuclease III Xth [Alicycliphilus denitrificans BC] gi|329308328|gb|AEB82743.1| exodeoxyribonuclease III Xth [Alicycliphilus denitrificans K601] Length = 266 Score = 162 bits (410), Expect = 5e-38, Method: Composition-based stats. Identities = 66/270 (24%), Positives = 113/270 (41%), Gaps = 15/270 (5%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTE--DKNFPFETLQSLNYHIET 59 + + + N+N IR+ + AWI +N PD IC+QE K + D FE L L H Sbjct: 1 MFKLTSLNLNGIRSATSKGVEAWIDQNRPDCICVQEIKAQSADMQGRFEELAGLRGHFHF 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GV I ++++P +++ + D + R++E F ++ L I + Y P G+ Sbjct: 61 AAKKGYSGVGIYTRHEPSDVLAGYGSQEFDAEGRYMELRFDTPSRRLSIISAYFPSGSSG 120 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + RL+ E I GD NI + D N + ++ F E Sbjct: 121 EERQLA--KYRFLDEFHPHLMRLKAEREFILCGDINIAHRQADLKNWRSNQKNSGFLPEE 178 Query: 180 RQSFQKLQNMGFTDAIRATHDT------HHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 R KL + + Y++W +++ N G R+D+ + +P Sbjct: 179 RAWMTKLLGDDTDGGLVDVYRRLQPDATDACYTWWSNRGQAYANNVGWRLDYHLATPALA 238 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 L + I K SDH P+ V ++ Sbjct: 239 QLARTEAIYK----GEKFSDHAPITVGYEM 264 >gi|189184130|ref|YP_001937915.1| exodeoxyribonuclease III [Orientia tsutsugamushi str. Ikeda] gi|189180901|dbj|BAG40681.1| exodeoxyribonuclease III [Orientia tsutsugamushi str. Ikeda] Length = 261 Score = 162 bits (409), Expect = 5e-38, Method: Composition-based stats. Identities = 78/263 (29%), Positives = 115/263 (43%), Gaps = 7/263 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62 + + TWN+NS+R RI L + NPDII LQETK ED+ FP +L Y +I GQ Sbjct: 1 MKIITWNINSVRMRIPLLQRLVHLYNPDIIALQETKVEDRLFPVTECINLGYKYITYSGQ 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 KSYNGVAILS+ + +I+ + N + Sbjct: 61 KSYNGVAILSRISFESTFVINLYNGEKRHIAINIGELSIHNFYV---PAGGDIPNANVNI 117 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K+ K+ ++ + ++ +I GD NI P D ++ N +T R+ Sbjct: 118 KFKHKLCYVDFMNAWFLNNKSKKDKIILLGDLNIAPLESDVWSSYQLRNVVSYTDIERKK 177 Query: 183 FQKLQ--NMGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLLHSA 239 + LYS+W Y WSK ++G R+DHI +S S + S Sbjct: 178 LMHNITSFDWIDAVRFFSGKHEKLYSWWSYRNVDWSKFDRGRRLDHIWISHPLESKIKSC 237 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 I RGW PSDH PV++ ++ Sbjct: 238 IIIKDARGWDMPSDHVPVMLEIE 260 >gi|296090736|ref|NP_001171688.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Gallus gallus] gi|194722849|dbj|BAG66138.1| APEX nuclease [Gallus gallus] Length = 300 Score = 162 bits (409), Expect = 5e-38, Method: Composition-based stats. Identities = 70/265 (26%), Positives = 124/265 (46%), Gaps = 16/265 (6%) Query: 5 TVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQ----SLNYHIET 59 V +WNV+ +RA + W++ PD++CLQETK ++ P E Q + Sbjct: 46 KVTSWNVDGLRAWVRKGGLQWLQSEAPDVVCLQETKCGAESIPSELSQLPHLPHKFWGSA 105 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 G+ Y+GV +LS+ PI + + ++ D + R + A F ++ + + Y+P+ Sbjct: 106 VGRSGYSGVGLLSRTAPIRVTHGIGIEEHDAEGRVLTAEFP----SVYVVSAYVPNSGRG 161 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + + + QRL+ ++P++ GD N+ + D NP FT E Sbjct: 162 LNRLQYRQRWDGA--FKSFLQRLDAQKPVVLCGDLNVAHREIDLRNPKSNRRSPGFTQEE 219 Query: 180 RQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R +F L + GF D+ R + + Y+FW Y + +N G R+D+ +LS L Sbjct: 220 RDAFGALLDGGFLDSFRLLYPDVPNAYTFWTYMGGARERNVGWRLDYFLLSTRLREALCD 279 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263 ++I + G SDH P+ + L + Sbjct: 280 SKIRSAAMG----SDHCPITLYLAL 300 >gi|312132556|ref|YP_003999895.1| xtha [Bifidobacterium longum subsp. longum BBMN68] gi|311773493|gb|ADQ02981.1| XthA [Bifidobacterium longum subsp. longum BBMN68] Length = 286 Score = 162 bits (409), Expect = 5e-38, Method: Composition-based stats. Identities = 64/286 (22%), Positives = 105/286 (36%), Gaps = 26/286 (9%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI---- 57 +T+ T NVN IRA + W ++ PD+ C+QE + ++ + Sbjct: 2 TITITTSNVNGIRAAKRKGIEDWAGKHAPDVWCMQEVRAPQEDVDS-IFGEFGFEYATAG 60 Query: 58 ------------ETCGQKSYNGVAILSKYQPIEIVTHLP--GDDLDVQARFIEATFTINT 103 E C K GV +L+ + + LP G+D+D T Sbjct: 61 KIASPSDLHSLNEVCRVKGRAGVGLLTDLEVTDKRYGLPSLGEDVDSGRWIETDVKTPQG 120 Query: 104 QTLRIGNLYLPHGNPIT----STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159 T+ + +Y+ GN KY + + R + + + GD+NI Sbjct: 121 YTITVACVYVHAGNTDDSTKMEQKYRFLDTMLTRMGELRDEAAHGGKQAVLCGDFNIAHT 180 Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSWSK 217 P D N E A F E R K + + + D Y++W ++ Sbjct: 181 PLDIKNAKANEKHAGFLPEERAYVDKWLDEYEFVDVMRSLAGDIQGPYTWWSQRGRAFDN 240 Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 N G RID+ +PE ID P + SDH P+ ++ D+ Sbjct: 241 NVGWRIDYQFATPELAETARGFVIDKAPTYELRWSDHAPLTITYDV 286 >gi|329945926|ref|ZP_08293613.1| putative exodeoxyribonuclease III [Actinomyces sp. oral taxon 170 str. F0386] gi|328528374|gb|EGF55352.1| putative exodeoxyribonuclease III [Actinomyces sp. oral taxon 170 str. F0386] Length = 277 Score = 162 bits (409), Expect = 6e-38, Method: Composition-based stats. Identities = 50/277 (18%), Positives = 86/277 (31%), Gaps = 20/277 (7%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +AT NVN IRA + W+ + PDI+ LQE + D+ + L I C Sbjct: 1 MRIATVNVNGIRAAARKGMGEWLTASAPDILLLQEVRA-DERIAADLLPGYESAIWPCRI 59 Query: 63 KSYNGV---------------AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107 K GV E G L+ + Sbjct: 60 KGRAGVGVAVREGGPAGLGELRYGVAAPGTEEPDVDSGRWLEADLTLTGLDGLERLTIIS 119 Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167 G KY R + ++ AGD N++ D + Sbjct: 120 AYLHSGQLGTEKMDQKYAHLELVDARMADLLAAARNSGPQVLMAGDLNVVRSERDIKSWK 179 Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRAT---HDTHHLYSFWDYYADSWSKNKGIRID 224 N ++ + + + Y++W ++ N G RID Sbjct: 180 PNHNKIAGVMDEEIAHLEGWFSSGWVDASRRLVGDEEQGPYTWWSQRGKAFDNNAGWRID 239 Query: 225 HIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + +++P S +D P ++ SDH P+++ Sbjct: 240 YQVITPALAERARSVAVDRAPDYASRWSDHAPLVIEY 276 >gi|302787589|ref|XP_002975564.1| hypothetical protein SELMODRAFT_103806 [Selaginella moellendorffii] gi|300156565|gb|EFJ23193.1| hypothetical protein SELMODRAFT_103806 [Selaginella moellendorffii] Length = 306 Score = 162 bits (409), Expect = 6e-38, Method: Composition-based stats. Identities = 61/274 (22%), Positives = 112/274 (40%), Gaps = 25/274 (9%) Query: 2 SVVTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFETLQ 51 ++V V +WNVN +RA + LA + D++CLQETK ++K+ + Sbjct: 36 NLVKVISWNVNGLRACMKRKNELEEEGSVLARLANSEDFDVLCLQETKLQEKDVEAIKQK 95 Query: 52 SLNYHIETCG-----QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 L + + + Y+G A++S+ +P+ + L D + R + A F Sbjct: 96 ILGGYSNSFWTCSSSKLGYSGCALISRIKPVSVTYGLGISQHDGEGRVVTAEFDTF---F 152 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 + G + + + LE +P+I GD N + D Y+P Sbjct: 153 LVSVYVPNSGQRLER--LTYRTTEWDPAFSTYLLELEKRKPVIVTGDLNCAHEEIDIYDP 210 Query: 167 IIWENDACF-TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225 + A F E + G D R H +++W Y +++ +NKG R+D+ Sbjct: 211 DGNKRSAGFTCEERTSFQTNFIDKGLVDTFRKQHPLAVGFTYWSYRSNARPQNKGWRLDY 270 Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 ++S S + + + + G SDH P+ + Sbjct: 271 FLVSQGLVSNVADSYVLPQLDG----SDHCPIGL 300 >gi|154149895|ref|YP_001403513.1| exodeoxyribonuclease III Xth [Candidatus Methanoregula boonei 6A8] gi|153998447|gb|ABS54870.1| exodeoxyribonuclease III Xth [Methanoregula boonei 6A8] Length = 269 Score = 162 bits (409), Expect = 6e-38, Method: Composition-based stats. Identities = 72/272 (26%), Positives = 114/272 (41%), Gaps = 12/272 (4%) Query: 1 MSVVTVATWNVNSIRARIH--NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 M + + +WNV+ +RAR + + + DI+CLQETKT + + P E Y+ Sbjct: 1 MEKLKLISWNVDGLRARCKAGQFIKLL-QVDFDILCLQETKTPELDIPQEIRSDKKYYSH 59 Query: 59 TCGQKSYN--GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 + + GV ILSK + +I + G D + R + A + T L L G Sbjct: 60 FSEVQKGSFAGVGILSKIECRQISDNFGGTKFDKEGRILIAEYDRFT--LLNIYFPLGAG 117 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 P T K+ + L F + L ++ +I GD+NI + D N Sbjct: 118 KPDTPDTLSHKLEFYDTLLGFVKELLSQKKNVIICGDFNIAHKDKDLVNAKTTPLIVGIY 177 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 E R+ +L+ +GF DA R H YS W Y +S N G R+D+ +S + Sbjct: 178 PEEREKLNELERLGFVDAFRYKHPNLVRYSRWPYQNNSRELNLGWRLDYFFVSAGLKDSI 237 Query: 237 HSARIDTKPRGWTKP-----SDHTPVIVSLDI 263 + + P SDH P+ + L + Sbjct: 238 TESEMLYHPGESDSHPQIAGSDHCPITLELSM 269 >gi|262373770|ref|ZP_06067048.1| exodeoxyribonuclease III [Acinetobacter junii SH205] gi|262311523|gb|EEY92609.1| exodeoxyribonuclease III [Acinetobacter junii SH205] Length = 280 Score = 162 bits (409), Expect = 6e-38, Method: Composition-based stats. Identities = 62/267 (23%), Positives = 111/267 (41%), Gaps = 7/267 (2%) Query: 2 SVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIET 59 ++ V + NVN +R+ + L W+++++ D++C+QE++ + + + Y H+ Sbjct: 18 KILRVVSINVNGLRSSVTKGLLEWLEQSDADVVCMQESRITHEQWTDKFKPEGWYTHLFP 77 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 + Y G AI S+ I + L + D Q RFI A F + Sbjct: 78 AERAGYAGTAIYSRLPFITVKNGLGFELADSQGRFITAEFDLGLSHPVHIASLYLPSGSS 137 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-E 178 K ++ + + Q + + +I GDYNI+ + D N + + E Sbjct: 138 GEDAQARKDLFLLEYAKILKQWRDENKSIIVCGDYNIVHKRIDIKNWSGNQKSSGCLPHE 197 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 ++G+ D R LYS+W + +KN G RID+ SP+ + + Sbjct: 198 RAWLDHIYDDLGYVDTFREVRQEAELYSWWSNRGQARAKNVGWRIDYQACSPDWKARTTN 257 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIPE 265 A + + SDH PVI+ I E Sbjct: 258 AWVYKE----QWFSDHAPVIIDYKINE 280 >gi|256824866|ref|YP_003148826.1| exodeoxyribonuclease III [Kytococcus sedentarius DSM 20547] gi|256688259|gb|ACV06061.1| exodeoxyribonuclease III [Kytococcus sedentarius DSM 20547] Length = 307 Score = 162 bits (409), Expect = 6e-38, Method: Composition-based stats. Identities = 55/307 (17%), Positives = 102/307 (33%), Gaps = 47/307 (15%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +A++NVN IRA W+ PD++ LQE + P + + + Sbjct: 1 MRIASFNVNGIRACQTRGFEHWLARRQPDVVSLQEVRCPVSLLPSGVFGEYHLSYDPGDR 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA------------------------T 98 NGVA+L++ P + T Sbjct: 61 AGRNGVAVLTREAPAAVRTFGAPVLRRAPGEEHTELTEPDAGPTLPRELKEFAGEGRYIE 120 Query: 99 FTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL-------------- 144 + + + +LYLP G + + A ++ Sbjct: 121 VDLADAPVTVASLYLPKGGLPADLQEKMAKRMREAPDGGAKYDRKMRFLAGFAKQLDRSR 180 Query: 145 ------EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAI--R 196 + GD+N+ D N +N F R+ F + + + Sbjct: 181 KAAAAAGREFVVMGDFNVAHTERDVKNWRGNKNSEGFLPSEREWFGSILSPRTLVDVVRS 240 Query: 197 ATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTP 256 DT Y++W + ++ ++ G RID+ + +P + SA +D +P + SDH P Sbjct: 241 QYPDTDGPYAWWSWMGQAFERDTGWRIDYHLATPTLARSVESAGVDKEPSRAERLSDHAP 300 Query: 257 VIVSLDI 263 V+V + Sbjct: 301 VVVDYRL 307 >gi|154151954|ref|YP_001405572.1| exodeoxyribonuclease III Xth [Candidatus Methanoregula boonei 6A8] gi|154000506|gb|ABS56929.1| exodeoxyribonuclease III Xth [Methanoregula boonei 6A8] Length = 270 Score = 161 bits (408), Expect = 7e-38, Method: Composition-based stats. Identities = 67/266 (25%), Positives = 111/266 (41%), Gaps = 15/266 (5%) Query: 5 TVATWNVNSIRAR--IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 T+ +WNVN +R +NP+I+C+QETK + P YH Sbjct: 3 TILSWNVNGLRGCYDRKQFLPVF-RHNPEIVCVQETKAPGEKLPERVRNLYGYHTFFSAV 61 Query: 63 KSYNG--VAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + + V + ++++P+ + D D + R + A + + N+ P G Sbjct: 62 PAGSTAGVGLFTRHEPLSVQYGFGDPDFDNKGRVLMADYG----RFVLLNIAFPLG-IKP 116 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE-NDACFTLEV 179 D+K+ + FL + E +I GD+N+ D YNP + + Sbjct: 117 MGNLDNKLRFYDAFLLYIRSLCEQGRAVIVCGDFNVAHTDKDLYNPPKKPVRQVGISPDE 176 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R +L +GFTD R H Y+ W + +S +N G RID+ +S + A Sbjct: 177 RGRIDQLIALGFTDTFRLFHAGPGYYTRWPFQNNSRERNFGWRIDYCFVSQALRPFVADA 236 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPE 265 I + K SDH PV + L++PE Sbjct: 237 TILHEI----KGSDHCPVALELNLPE 258 >gi|67459413|ref|YP_247037.1| exodeoxyribonuclease III [Rickettsia felis URRWXCal2] gi|67004946|gb|AAY61872.1| Exodeoxyribonuclease III [Rickettsia felis URRWXCal2] Length = 267 Score = 161 bits (408), Expect = 7e-38, Method: Composition-based stats. Identities = 78/263 (29%), Positives = 121/263 (46%), Gaps = 7/263 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62 + + TWN+NS+R RI L E+ PDII LQETK +D FP E ++++ Y H+ GQ Sbjct: 1 MKIVTWNINSLRLRIDLLRKLAHEHQPDIILLQETKVDDSLFPLEVIKNIGYEHVTYSGQ 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 KSYNGVAI+SK+ + + + I I+ + + + Sbjct: 61 KSYNGVAIISKFPLNNVFSLELYNSDKRHIAAIVNDIEIHNFYV---PAGGDIPDIEVNL 117 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K+ K+ +++ + + + +I GD NI P HD ++ N T R Sbjct: 118 KFKHKLEYVRLMQEWLTTNRTKNDKIIIVGDLNIAPLEHDVWSSKQLRNVISHTDIERSL 177 Query: 183 FQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLLHSA 239 +LQN + Y++W Y W K N+G R+DHI +S L S Sbjct: 178 LVELQNSLGFIDSSRHFVPFDEKFYTWWSYRNIDWKKSNRGRRLDHIWVSDNLKDALFSI 237 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 + ++ R W+ PSDH P V+L Sbjct: 238 HLLSEARDWSPPSDHVPYFVTLK 260 >gi|326381939|ref|ZP_08203632.1| exodeoxyribonuclease III [Gordonia neofelifaecis NRRL B-59395] gi|326199365|gb|EGD56546.1| exodeoxyribonuclease III [Gordonia neofelifaecis NRRL B-59395] Length = 281 Score = 161 bits (408), Expect = 7e-38, Method: Composition-based stats. Identities = 76/281 (27%), Positives = 119/281 (42%), Gaps = 21/281 (7%) Query: 1 MSV--VTVATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51 MS +V T NVN IRA + + W++ PD++ +QE + D + LQ Sbjct: 1 MSTSAFSVTTINVNGIRAAVKHRSEENLGMLPWLETAAPDVVLMQEVRASDA-LARKALQ 59 Query: 52 ---SLNYHIETCGQKSYNG--VAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 +H ++ V ILS+ QP + ++ DV R+IEA F I+ T+ Sbjct: 60 PALDAGWHFVHTESEAKGRAGVGILSRQQPSAVRIGFGSEEFDVAGRYIEADFDIDGDTV 119 Query: 107 RIGNLYLPHG-----NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161 +LYLP G N KY++K+ ++ F + L + AGD+NI P Sbjct: 120 TAASLYLPTGAALTENEKDVEKYEEKLRFLTAFGPHLDKLLGSGGLAVVAGDWNIAPDER 179 Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKG 220 D N +A F R+ L G+ D RA H D Y++W + ++ + G Sbjct: 180 DIKNWKGNVKNAGFLPHEREWVAGLLEAGWVDLARAHHGDVAGPYAWWSWRGKAFDNDAG 239 Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 RID+ + +P +D + SDH PV Sbjct: 240 WRIDYHLATPALAERAQRTWVDRADAYHLRWSDHAPVTAVF 280 >gi|300362953|ref|ZP_07059123.1| exodeoxyribonuclease III [Lactobacillus gasseri JV-V03] gi|300353003|gb|EFJ68881.1| exodeoxyribonuclease III [Lactobacillus gasseri JV-V03] Length = 268 Score = 161 bits (408), Expect = 7e-38, Method: Composition-based stats. Identities = 65/262 (24%), Positives = 109/262 (41%), Gaps = 12/262 (4%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ +WNVN +RA + H + + DI +Q+T+ E + L + Sbjct: 14 IMKFMSWNVNGLRAALRHGFVNTFTDLDADIFAIQDTRVEANEVQID-LPGYYQYWNYAK 72 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y G A+ +K +PI + ++D + R I F I G + Sbjct: 73 RKGYAGTAVFTKEKPITVANGFGVPEVDGEGRSITLEFPNFYF---IDVQVPFSGEKLQR 129 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + + + R L +P+I GD ++ + D P A FT R+ Sbjct: 130 LDFRELWAQTFRNYVTK---LMQYKPVIIGGDMSVAHEKIDLAEPDDNHRHAGFTGIERK 186 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L N GF D R H Y++W Y D+ +KN G R+D+ ++S + + +I Sbjct: 187 EFSELLNAGFIDTFRYFHPDEAKYTYWSYREDARAKNIGWRLDYFLVSHNLEDKIINTKI 246 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 G SDH P+ + LDI Sbjct: 247 LNNIMG----SDHCPIELDLDI 264 >gi|328956310|ref|YP_004373643.1| exodeoxyribonuclease III Xth [Coriobacterium glomerans PW2] gi|328456634|gb|AEB07828.1| exodeoxyribonuclease III Xth [Coriobacterium glomerans PW2] Length = 283 Score = 161 bits (408), Expect = 7e-38, Method: Composition-based stats. Identities = 65/269 (24%), Positives = 106/269 (39%), Gaps = 15/269 (5%) Query: 5 TVATWNVNSIRARIHN---LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 A+WNVN +RA + + N DI+ +QETK ++ + L + Sbjct: 20 RFASWNVNGLRALMKKEPDFSEIAASLNADILAIQETKLQEGQIDLD-LAGYHQTWSYAA 78 Query: 62 QKSYNGVAILSKYQPIEIVTHL------PGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 +K Y+G A+ S+ QPI + G +L A + + ++Y P+ Sbjct: 79 RKGYSGTAVFSREQPIRTLRADAMLDVVEGGELLEPAIREGRVCALEFERFWFADVYTPN 138 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + ++P++ GD+N+ D NP +A F Sbjct: 139 SQDGLARLPVRLAWDEAYRAFLKQLERMGDKPVVTCGDFNVAHNEIDLRNPKSNRGNAGF 198 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 + E R SF +L GFTD R + YS+W Y + N G RID+ ++S Sbjct: 199 SDEERASFSRLLEAGFTDTFRYLYPDVRDAYSWWSYRFHARRTNAGWRIDYFLVSDSVRD 258 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + A I G SDH PV + + + Sbjct: 259 RIVEATIRQDVFG----SDHCPVELVIAL 283 >gi|227547629|ref|ZP_03977678.1| exodeoxyribonuclease III [Bifidobacterium longum subsp. infantis ATCC 55813] gi|227211884|gb|EEI79780.1| exodeoxyribonuclease III [Bifidobacterium longum subsp. infantis ATCC 55813] Length = 286 Score = 161 bits (408), Expect = 8e-38, Method: Composition-based stats. Identities = 64/286 (22%), Positives = 105/286 (36%), Gaps = 26/286 (9%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI---- 57 +T+ T NVN IRA + W ++ PD+ C+QE + ++ + Sbjct: 2 TITITTSNVNGIRAAKRKGIEDWAGKHAPDVWCMQEVRAPQEDVDS-IFGEFGFEYATAG 60 Query: 58 ------------ETCGQKSYNGVAILSKYQPIEIVTHLP--GDDLDVQARFIEATFTINT 103 E C K GV +L+ + + LP G+D+D T Sbjct: 61 KIASPSDLHSLNEVCRVKGRAGVGLLTDLEVTDKRYGLPSLGEDVDSGRWIETDVKTPQG 120 Query: 104 QTLRIGNLYLPHGNPIT----STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159 T+ + +Y+ GN KY + + R + + + GD+NI Sbjct: 121 YTITVACVYVHAGNTDDSTKMEQKYRFLDTMLTRMGELRDEAAHGGKQAVLCGDFNIAHT 180 Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSWSK 217 P D N E A F E R K + + + D Y++W ++ Sbjct: 181 PLDIKNAKANEKHAGFLPEERAYVDKWLDEYEFVDVMRSLAGDIRGPYTWWSQRGRAFDN 240 Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 N G RID+ +PE ID P + SDH P+ ++ D+ Sbjct: 241 NVGWRIDYQFATPELAETARGFVIDKAPTYELRWSDHAPLTITYDV 286 >gi|116630243|ref|YP_815415.1| exonuclease III [Lactobacillus gasseri ATCC 33323] gi|116095825|gb|ABJ60977.1| Exonuclease III [Lactobacillus gasseri ATCC 33323] Length = 268 Score = 161 bits (408), Expect = 8e-38, Method: Composition-based stats. Identities = 66/262 (25%), Positives = 110/262 (41%), Gaps = 12/262 (4%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ +WNVN +RA + H + + DI +Q+T+ E + L + Sbjct: 14 IMKFMSWNVNGLRAALRHGFVNTFTDLDADIFAIQDTRVEPNEVQID-LPGYYQYWNYAK 72 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y G A+ +K +PI + ++D + R I F+ I G + Sbjct: 73 RKGYAGTAVFTKEKPITVANGFGVPEVDGEGRSITLEFSNFYF---IDVQVPFSGEKLQR 129 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + + + R L +P+I GD ++ D P A FT R+ Sbjct: 130 LDFRELWAQTFRNYVTK---LMQYKPVIIGGDMSVAHDKIDLAEPDDNHRHAGFTGIERK 186 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L N GF D R H Y++W Y D+ +KN G R+D+ ++S + +A+I Sbjct: 187 EFSELLNAGFIDTFRYFHPDEAKYTYWSYREDARAKNIGWRLDYFLVSNNLEDKMINAQI 246 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 G SDH P+ + LDI Sbjct: 247 LNNIMG----SDHCPIELDLDI 264 >gi|38234604|ref|NP_940371.1| putative exonuclease [Corynebacterium diphtheriae NCTC 13129] gi|38200868|emb|CAE50573.1| Putative exonuclease [Corynebacterium diphtheriae] Length = 235 Score = 161 bits (408), Expect = 8e-38, Method: Composition-based stats. Identities = 71/258 (27%), Positives = 117/258 (45%), Gaps = 23/258 (8%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A WNVNS RAR+ + +++ ++ D++ +QETK D FP + Y G Sbjct: 1 MRIANWNVNSARARVDRIQDFLERHDIDVLAMQETKCRDDQFP----EFKGYEAAHFGIN 56 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVAILS+ +++T F + +R+ +LY+P+G I Sbjct: 57 QWNGVAILSRVGIEDVLTSFGQ---PDYEEFEPRSIGAICGGVRVWSLYVPNGREIAHPH 113 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 YD K+ W+ Q + ++ GD+NI P +D ++ + T RQ+F Sbjct: 114 YDYKLRWLYA-----LQHYGVTGDTVWCGDFNIAPTDNDVWDIDFFHGKTHVTEPERQAF 168 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + L + + Y++WDY A + KN+G+RID + T ID Sbjct: 169 EALTD-------IMPITSPEGYTYWDYTAGRFPKNQGMRIDFQL--SNMTP--TGGFIDV 217 Query: 244 KPRGWTKPSDHTPVIVSL 261 + R SDH PV+V Sbjct: 218 EERKGKGASDHAPVVVDY 235 >gi|145225449|ref|YP_001136127.1| exodeoxyribonuclease III Xth [Mycobacterium gilvum PYR-GCK] gi|315445802|ref|YP_004078681.1| exodeoxyribonuclease III [Mycobacterium sp. Spyr1] gi|145217935|gb|ABP47339.1| exodeoxyribonuclease III Xth [Mycobacterium gilvum PYR-GCK] gi|315264105|gb|ADU00847.1| exodeoxyribonuclease III [Mycobacterium sp. Spyr1] Length = 274 Score = 161 bits (408), Expect = 9e-38, Method: Composition-based stats. Identities = 68/273 (24%), Positives = 112/273 (41%), Gaps = 19/273 (6%) Query: 4 VTVATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKNFPFETLQSL--N 54 VTV+T NVN IRA I + W KE D++CLQET+ +D L Sbjct: 5 VTVSTINVNGIRAAIKQRSPENLGMLPWFKETAADVVCLQETRADDAQLAEALAPVLADG 64 Query: 55 YHIET--CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 +H+ + K NGVA+LS+ E ++ R++EA + + ++Y Sbjct: 65 WHLASAEPSMKGRNGVAVLSRDPIDEFRIGCGAEEFATHGRYLEADTAG----VTVASVY 120 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFA---SQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 P G T + + + R A + + + GD+NI +D N Sbjct: 121 FPTGEAETDRQREKERFMAAVAARMAALLQRSVVDGHESVLCGDWNIAHTENDIKNWKGN 180 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIML 228 A F + RQ ++ G+ D +R H Y++W + ++ + G RID+ + Sbjct: 181 VKKAGFLPQERQWLTEVLGTGWVDVVRQAHPDVAGPYAWWSWRGKAFDNDAGWRIDYHLA 240 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +P + S + + SDH PV V Sbjct: 241 TPGLAARATSVLTERPAAYALRWSDHCPVTVHY 273 >gi|296113045|ref|YP_003626983.1| catabolite repression control protein [Moraxella catarrhalis RH4] gi|295920739|gb|ADG61090.1| catabolite repression control protein [Moraxella catarrhalis RH4] Length = 336 Score = 161 bits (408), Expect = 9e-38, Method: Composition-based stats. Identities = 63/268 (23%), Positives = 110/268 (41%), Gaps = 12/268 (4%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE--T 59 V+ V + NVN +RA W+ ++ D++C+QE++ + + + + +H Sbjct: 74 VLRVVSINVNGLRAAEKKGFFEWLAISDADVVCIQESRITHEQWT-DKFRPKGWHTHLFA 132 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL---YLPHG 116 + Y GVAI S+ + +V L D D Q RFI A F ++ Q + Sbjct: 133 AQKAGYAGVAIYSRLPFVSVVDGLGFDLADSQGRFICAQFDLSAQGIDHPVYIASLYLPS 192 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 K +++++ Q + + LI GDYNI+ + D N + + Sbjct: 193 GSSGEEAQARKDLFLEKYRHILKQWRDENKSLIVCGDYNIVHKRIDIKNWSGNQKASGCL 252 Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E +G+ D R +YS+W + +KN G RID+ SP+ Sbjct: 253 PHERAWLDHIYDELGYVDTFRVVRKDADIYSWWSNRGQARAKNVGWRIDYHACSPDWKKR 312 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +A + + SDH PVI+ + Sbjct: 313 TLNAWVYKD----SWFSDHAPVIIDYQL 336 >gi|269955565|ref|YP_003325354.1| exodeoxyribonuclease III Xth [Xylanimonas cellulosilytica DSM 15894] gi|269304246|gb|ACZ29796.1| exodeoxyribonuclease III Xth [Xylanimonas cellulosilytica DSM 15894] Length = 279 Score = 161 bits (408), Expect = 9e-38, Method: Composition-based stats. Identities = 57/280 (20%), Positives = 98/280 (35%), Gaps = 20/280 (7%) Query: 3 VVTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++TVAT NVN IRA + + +WI + +PD++ +QE + D + + C Sbjct: 1 MLTVATANVNGIRAAMRRGMDSWIADRSPDVLLMQEVRAPDAVLDG-FFDGWHVAHQACD 59 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 K GVA+ S+ + L E ++T ++ LP G +T Sbjct: 60 IKGRAGVAVASRLPVHAVRVGLEAYGPRSSEGGCEPEPAVDTGRWVEADVELPGGGLLTV 119 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFA----------------GDYNIIPQPHDCYN 165 + GD NI D N Sbjct: 120 VSAYIHSGSTWPVDNPVKMVEKYAYLEKVTARLAELGSGPTPTLVAGDLNIAHHNVDIAN 179 Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH--DTHHLYSFWDYYADSWSKNKGIRI 223 +A F E R + + + H + Y++W + ++ +KG RI Sbjct: 180 WKGNLKNAGFLPEERAYLDRWFDELGWTDLGRAHGGEGPGPYTWWSWRGQAYVNDKGWRI 239 Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 D+ + +P +D P + SDH P+I + D+ Sbjct: 240 DYQLANPALAPRALKVEVDRAPTYEERWSDHAPLIATYDL 279 >gi|121592667|ref|YP_984563.1| exodeoxyribonuclease III Xth [Acidovorax sp. JS42] gi|120604747|gb|ABM40487.1| exodeoxyribonuclease III Xth [Acidovorax sp. JS42] Length = 267 Score = 161 bits (408), Expect = 9e-38, Method: Composition-based stats. Identities = 69/272 (25%), Positives = 114/272 (41%), Gaps = 16/272 (5%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTE--DKNFPFETLQSLNYHIET 59 + + + N+N IR+ + AWI ++ PD IC+QE K + D FE L L + Sbjct: 1 MFKLTSLNLNGIRSATSKGVEAWIAQSRPDCICVQEIKAQSADMQGRFEELAGLKGYFHF 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GV I ++++P ++V + D + R++E F + L I + Y P G+ Sbjct: 61 AVKKGYSGVGIYARHEPSDVVIGYGSSEFDTEGRYVELRFDTPARRLSIISAYFPSGSSG 120 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + RL+ E I GD NI Q D N + ++ F E Sbjct: 121 EERQLA--KFRFLEEFHPHLMRLKAEREFILCGDINIAHQQIDLKNWRSNQKNSGFLPEE 178 Query: 180 RQSFQKL-----QNMGFTDAIRATHDT--HHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 R KL G D R Y++W +++ N G R+D+ + +P Sbjct: 179 RAWMTKLLHISDPAGGLVDVYRQLQPETTDACYTWWSNRGQAYANNVGWRLDYHLATPAI 238 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 +L + I K SDH P+ V ++ Sbjct: 239 AALARTEEIYKA----QKFSDHAPITVGYELS 266 >gi|120608991|ref|YP_968669.1| exodeoxyribonuclease III Xth [Acidovorax citrulli AAC00-1] gi|120587455|gb|ABM30895.1| exodeoxyribonuclease III Xth [Acidovorax citrulli AAC00-1] Length = 264 Score = 161 bits (407), Expect = 9e-38, Method: Composition-based stats. Identities = 69/267 (25%), Positives = 115/267 (43%), Gaps = 16/267 (5%) Query: 7 ATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFP--FETLQSLNYHIETCGQK 63 + N+N IR A + AWI E PD IC+QE K + + FETL L H +K Sbjct: 2 TSLNLNGIRSAASKGVEAWIAETRPDCICVQEIKAQSADIEGRFETLAGLKGHFHYATKK 61 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 Y+GV I ++++P ++ + D + R++EA F ++ L I + Y P G+ + Sbjct: 62 GYSGVGIYTRHEPSDVRVGYGSTEFDAEGRYVEARFDTPSRKLSIISAYFPSGSSGPERQ 121 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 R++ E I GD NI Q D N + ++ F E R+ Sbjct: 122 LA--KFRFLAEFHVHLMRVKEEREFILCGDVNIAHQQIDLKNWRSNQKNSGFLPEEREWM 179 Query: 184 QKLQNMGFTD-------AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 KL + + T Y++W +++ N G R+D+ + +P +L Sbjct: 180 TKLLHKTDPGGGLVDVYRLLQPDTTETAYTWWSNRGQAYANNVGWRLDYHLATPAIAALA 239 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263 + I + K SDH P+ V ++ Sbjct: 240 RTESIYKQ----QKFSDHAPITVGYEL 262 >gi|160895788|ref|YP_001561370.1| exodeoxyribonuclease III Xth [Delftia acidovorans SPH-1] gi|160361372|gb|ABX32985.1| exodeoxyribonuclease III Xth [Delftia acidovorans SPH-1] Length = 267 Score = 161 bits (407), Expect = 9e-38, Method: Composition-based stats. Identities = 69/271 (25%), Positives = 116/271 (42%), Gaps = 16/271 (5%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFP--FETLQSLNYHIET 59 + + + N+N IR+ + AWI+ PD IC+QE K + + FE L L H Sbjct: 1 MFKLTSLNLNGIRSASTKGVEAWIEATAPDCICVQEIKAQAADMTGRFELLAGLRGHFHY 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GV + S+++P ++V + D + R++EA F + L I + Y P G+ Sbjct: 61 AEKKGYSGVGVYSRHEPSDVVVGFGSHEFDAEGRYVEARFDTPARKLSIISAYFPSGSSG 120 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + R++ E I GD NI Q D N + ++ FT E Sbjct: 121 ELR--QTAKFRFLAEMHEHLMRMKGEREFILCGDINIAHQQIDLKNWRSNQKNSGFTPEE 178 Query: 180 RQSFQKLQNMGFTD-------AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 R+ KL + + T Y++W +++ N G R+D+ + +P Sbjct: 179 REWMTKLLHKTDPTGGLVDVYRLLQPDTTDACYTWWSNRGQAYANNVGWRLDYHLATPAI 238 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +L + I K SDH PV + D+ Sbjct: 239 AALARTEHIYKDV----KFSDHAPVTIGYDM 265 >gi|317482487|ref|ZP_07941503.1| exodeoxyribonuclease III [Bifidobacterium sp. 12_1_47BFAA] gi|316916039|gb|EFV37445.1| exodeoxyribonuclease III [Bifidobacterium sp. 12_1_47BFAA] Length = 286 Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats. Identities = 64/286 (22%), Positives = 105/286 (36%), Gaps = 26/286 (9%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI---- 57 +T+ T NVN IRA + W ++ PD+ C+QE + + + Sbjct: 2 TITITTSNVNGIRAAKRKGIEDWAGKHAPDVWCIQEVRAPQDDVDS-IFDEFGFEYATAG 60 Query: 58 ------------ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR--FIEATFTINT 103 E C K GV +L+ + + LPG DV + T Sbjct: 61 KIEAPANLHAMNEVCRVKGRAGVGLLTDLEVLAKRYGLPGLSEDVDSGRWIETDVKTPEG 120 Query: 104 QTLRIGNLYLPHGNPITS----TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159 T+ + ++Y+ GN KY + +KR + + + GD+NI Sbjct: 121 YTVTVASVYVHAGNTDDPTKMEQKYRFLDTMLKRMGALRDEAAHGGKQAVLCGDFNIAHT 180 Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSWSK 217 P D N E A F E R K + + + D Y++W ++ Sbjct: 181 PLDIKNAKANEKHAGFLPEERAYVDKWLDEYEFVDVMRSLAGDIQGPYTWWSQRGRAFDN 240 Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 N G RID+ +PE ID P + SDH P+ ++ ++ Sbjct: 241 NVGWRIDYQFATPELAETARGFVIDKAPTYDKRWSDHAPLTITYEV 286 >gi|222109447|ref|YP_002551711.1| exodeoxyribonuclease iii xth [Acidovorax ebreus TPSY] gi|221728891|gb|ACM31711.1| exodeoxyribonuclease III Xth [Acidovorax ebreus TPSY] Length = 267 Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats. Identities = 69/272 (25%), Positives = 115/272 (42%), Gaps = 16/272 (5%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTE--DKNFPFETLQSLNYHIET 59 + + + N+N IR+ + AWI ++ PD IC+QE K + D FE L L + Sbjct: 1 MFKLTSLNLNGIRSATSKGVEAWIAQSRPDCICVQEIKAQSADMQGRFEELAGLKGYFHF 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GV I ++++P ++V + D + R++E F + L I + Y P G+ Sbjct: 61 AVKKGYSGVGIYARHEPSDVVIGYGSSEFDTEGRYVELRFDTPARRLSIISAYFPSGSSG 120 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + RL+ E I GD NI Q D N + ++ F E Sbjct: 121 EERQLA--KFRFLEEFHPHLMRLKAEREFILCGDINIAHQQIDLKNWRSNQKNSGFLPEE 178 Query: 180 RQSFQKLQN-----MGFTDAIRATHDT--HHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 R KL + G D R Y++W +++ N G R+D+ + +P Sbjct: 179 RAWMTKLLHISDPTGGLVDVYRQLQPEATDACYTWWSNRGQAYANNVGWRLDYHLATPAI 238 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 +L + I K SDH P+ V ++ Sbjct: 239 AALARTEEIYKA----QKFSDHAPITVGYELS 266 >gi|332187721|ref|ZP_08389456.1| exodeoxyribonuclease III family protein [Sphingomonas sp. S17] gi|332012287|gb|EGI54357.1| exodeoxyribonuclease III family protein [Sphingomonas sp. S17] Length = 260 Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats. Identities = 66/263 (25%), Positives = 114/263 (43%), Gaps = 8/263 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62 + +A+WN+NS+R R + ++ E PDI+CLQETK D +FPF+ ++ Y HI GQ Sbjct: 1 MKIASWNINSVRFRAAIVEQFLTEAAPDILCLQETKVVDDDFPFDLFRAAGYEHIIIHGQ 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 + ++GVAI S+ +E + + + + + + + I G+ Sbjct: 61 RMHHGVAIASRVPIVEDDRLDWQANAEARHVGVRLPNGVRLENVYI----PAGGDVPDRE 116 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ- 181 + R +L+ P I GD+NI P D ++ + T + Sbjct: 117 VNPKFGQKLDFLGRMIEWSGKLDCPTILTGDFNIAPLESDVWSHKQLLDVVSHTPIEVET 176 Query: 182 -SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLLHSA 239 + + N LY++W Y A W + ++G R+DH+ + + Sbjct: 177 LASLQASNDWVDLGRHFIPAPQRLYTWWSYRAKDWAASDRGRRLDHMWATRDVAEKAIGH 236 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 R+ R W KPSDH P++ D Sbjct: 237 RVFEGCRSWLKPSDHIPIMTEFD 259 >gi|311110171|ref|ZP_07711568.1| exodeoxyribonuclease III [Lactobacillus gasseri MV-22] gi|311065325|gb|EFQ45665.1| exodeoxyribonuclease III [Lactobacillus gasseri MV-22] Length = 265 Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats. Identities = 66/262 (25%), Positives = 110/262 (41%), Gaps = 12/262 (4%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ +WNVN +RA + H + + DI +Q+T+ E + L + Sbjct: 11 IMKFMSWNVNGLRAALRHGFVNTFTDLDADIFAIQDTRVEPNEVQID-LPGYYQYWNYAK 69 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y G A+ +K +PI + ++D + R I F+ I G + Sbjct: 70 RKGYAGTAVFTKEKPITVANGFGVPEVDGEGRSITLEFSNFYF---IDVQVPFSGEKLQR 126 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + + + R L +P+I GD ++ D P A FT R+ Sbjct: 127 LDFRELWAQTFRNYVTK---LMQYKPVIIGGDMSVAHDKIDLAEPDDNHRHAGFTGIERK 183 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L N GF D R H Y++W Y D+ +KN G R+D+ ++S + +A+I Sbjct: 184 EFSELLNAGFIDTFRYFHPDEAKYTYWSYREDARAKNIGWRLDYFLVSNNLEDKMINAQI 243 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 G SDH P+ + LDI Sbjct: 244 LNNIMG----SDHCPIELDLDI 261 >gi|326577094|gb|EGE26988.1| catabolite repression control protein [Moraxella catarrhalis O35E] Length = 335 Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats. Identities = 64/268 (23%), Positives = 110/268 (41%), Gaps = 12/268 (4%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE--T 59 V+ V + NVN +RA W+ +N D++C+QE++ + + + + +H Sbjct: 73 VLRVVSINVNGLRAAEKKGFFEWLAVSNADVVCIQESRITHEQWT-DKFRPKGWHTHLFA 131 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL---YLPHG 116 + Y GVAI S+ + +V L D D Q RFI A F ++ Q + Sbjct: 132 AQKAGYAGVAIYSRLPFVSVVDGLGFDLADSQGRFICAQFDLSAQGIDHPVYIASLYLPS 191 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 K +++++ Q + + LI GDYNI+ + D N + + Sbjct: 192 GSSGEEAQARKDLFLEKYRHILKQWRDENKSLIVCGDYNIVHKRIDIKNWSGNQKASGCL 251 Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E +G+ D R +YS+W + +KN G RID+ SP+ Sbjct: 252 PHERAWLDHIYDELGYVDTFRVVRKDADIYSWWSNRGQARAKNVGWRIDYHACSPDWKKR 311 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +A + + SDH PVI+ + Sbjct: 312 TLNAWVYKD----SWFSDHAPVIIDYQL 335 >gi|319948930|ref|ZP_08023037.1| exodeoxyribonuclease III Xth [Dietzia cinnamea P4] gi|319437410|gb|EFV92423.1| exodeoxyribonuclease III Xth [Dietzia cinnamea P4] Length = 284 Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats. Identities = 59/279 (21%), Positives = 107/279 (38%), Gaps = 20/279 (7%) Query: 4 VTVATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKNFPFETLQSL--N 54 +TV+T NVN IRA + W++ + D++ LQE + ++ +L Sbjct: 6 LTVSTVNVNGIRAAVKQRSETNLGFLPWLESSGADVVALQEVRADEDQTRKALAPALDAG 65 Query: 55 YHIE--TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT--INTQTLRIGN 110 +H+ K GVA+LS+ + ++ + R+IEA + ++ +T+ + + Sbjct: 66 WHLIGSASSMKGRAGVALLSRQESSDVCVGYGDPEFAESGRYIEAVYPGAVDGETVTVAS 125 Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRL----ELEEPLIFAGDYNIIPQPHDCYNP 166 LYLP G+ T + + A + +I GD+NI + D N Sbjct: 126 LYLPSGSANTPKQDEKDRFLKTFREFLAERAAELKSREGHEMIICGDWNIAHREEDLKNH 185 Query: 167 IIWENDACFTLEVRQSFQKLQN---MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223 + F R+ + D YS+W ++ + G RI Sbjct: 186 KGNHKSSGFLPHEREWMTDVFADGSGWTDIVRHRRPDEVGPYSWWSQRGKAFDNDAGWRI 245 Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 D+ ++S +D + SDH PV V + Sbjct: 246 DYQVVSDGLVDRAVKDWVDRAEAYDMRWSDHAPVTVVYE 284 >gi|213691818|ref|YP_002322404.1| exodeoxyribonuclease III Xth [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213523279|gb|ACJ52026.1| exodeoxyribonuclease III Xth [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320457912|dbj|BAJ68533.1| putative exodeoxyribonuclease [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 286 Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats. Identities = 63/286 (22%), Positives = 105/286 (36%), Gaps = 26/286 (9%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI---- 57 +T+ T NVN IRA + W ++ PD+ C+QE + + + Sbjct: 2 TITITTSNVNGIRAAKRKGIEDWAGKHAPDVWCIQEVRAPQDDVDS-IFDEFGFEYATAG 60 Query: 58 ------------ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR--FIEATFTINT 103 E C K GV +L+ + ++ LPG DV + T Sbjct: 61 KIEAPANLHAMNEVCRVKGRAGVGLLTDLEVLDKRYGLPGLSEDVDSGRWIETDVKTPEG 120 Query: 104 QTLRIGNLYLPHGNPITS----TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159 + + ++Y+ GN KY + +KR + + + GD+NI Sbjct: 121 YAITVASVYVHAGNTDDPTKMEQKYRFLDTMLKRMGALRDEAAHGGKQAVLCGDFNIAHT 180 Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSWSK 217 P D N E A F E R K + + + D Y++W ++ Sbjct: 181 PLDIKNAKANEKHAGFLPEERAYVDKWLDEYEFVDVMRSLAGDIQGPYTWWSQRGRAFDN 240 Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 N G RID+ +PE ID P + SDH P+ ++ ++ Sbjct: 241 NVGWRIDYQFATPELAETARGFVIDKAPTYDKRWSDHAPLTITYEV 286 >gi|199436395|dbj|BAG70947.1| thermostable exonuclease III [Thermoplasma acidophilum] Length = 250 Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats. Identities = 66/260 (25%), Positives = 107/260 (41%), Gaps = 14/260 (5%) Query: 5 TVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 +WNVN +RA + + +K+++ I LQETK + + P E L YH+ K Sbjct: 4 KFLSWNVNGLRAAVKNGAVSVLKQDDYFGIALQETKADSTSVPEEMYH-LGYHLYNNPAK 62 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +S + I ++ + + +E + + HG K Sbjct: 63 KKGYSGTMSLVREKPIAVSYGFENEEGRILNLEFDK---FYFINVYFPNAQHGLTRLDMK 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 D S L ++PLI GD+N+ + D P EN+A FT + R Sbjct: 120 LDFG-----EKFLEYSNELRKKKPLIICGDFNVAHEEIDIARPKDNENNAGFTKQERDWM 174 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 K + G+ D R YS+W Y ++ +KN G RID+ ++S + + A I Sbjct: 175 TKFLDSGYVDTYRIFMKEGGHYSWWSYRFNARAKNIGWRIDYFVVSDDIRDRVKKAEILE 234 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 G SDH PV + +D+ Sbjct: 235 TVTG----SDHAPVTLEVDL 250 >gi|269796071|ref|YP_003315526.1| exodeoxyribonuclease III Xth [Sanguibacter keddieii DSM 10542] gi|269098256|gb|ACZ22692.1| exodeoxyribonuclease III Xth [Sanguibacter keddieii DSM 10542] Length = 266 Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats. Identities = 61/266 (22%), Positives = 109/266 (40%), Gaps = 5/266 (1%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 +VT+AT NVN +RA + + W+ E P+I+ LQE + D+ + N + C Sbjct: 1 MVTIATANVNGVRAAYRNGMGEWLAERKPEILLLQEVRATDEILEGLLGEGWNSVHQACD 60 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQA---RFIEATFTINTQTLRIGNLYLPHGNP 118 K GVAI + + L + +V R++EA + + + H Sbjct: 61 IKGRAGVAIATTLPFAAVRVGLGNGEPEVPVDTGRWVEADIELPSGEVLTVVSVYIHSGT 120 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + K D K + +++ + ++ ++ GD NI Q D N A F E Sbjct: 121 AGTPKMDQKFAHLEKVDARLRELMDSGRHVVVGGDVNIAHQNVDIKNWKGNLKSAGFLPE 180 Query: 179 VRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 R + G+ D R + Y++W S++ + G RID+ + +P L Sbjct: 181 ERAYLDRWFEAGWVDLGRRHGGEGPGPYTWWSNRGQSFANDAGWRIDYQLSTPALAELAS 240 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263 + +D + SDH P++ + Sbjct: 241 NVHVDRADSYEARWSDHAPLLADYAL 266 >gi|326561625|gb|EGE11962.1| catabolite repression control protein [Moraxella catarrhalis 103P14B1] gi|326562589|gb|EGE12900.1| catabolite repression control protein [Moraxella catarrhalis 46P47B1] gi|326564034|gb|EGE14278.1| catabolite repression control protein [Moraxella catarrhalis 12P80B1] gi|326570498|gb|EGE20538.1| catabolite repression control protein [Moraxella catarrhalis BC8] gi|326575630|gb|EGE25553.1| catabolite repression control protein [Moraxella catarrhalis CO72] Length = 336 Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats. Identities = 64/268 (23%), Positives = 110/268 (41%), Gaps = 12/268 (4%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE--T 59 V+ V + NVN +RA W+ +N D++C+QE++ + + + + +H Sbjct: 74 VLRVVSINVNGLRAAEKKGFFEWLAVSNADVVCIQESRITHEQWT-DKFRPKGWHTHLFA 132 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL---YLPHG 116 + Y GVAI S+ + +V L D D Q RFI A F ++ Q + Sbjct: 133 AQKAGYAGVAIYSRLPFVSVVDGLGFDLADSQGRFICAQFDLSAQGIDHPVYIASLYLPS 192 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 K +++++ Q + + LI GDYNI+ + D N + + Sbjct: 193 GSSGEEAQARKDLFLEKYRHILKQWRDENKSLIVCGDYNIVHKRIDIKNWSGNQKASGCL 252 Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E +G+ D R +YS+W + +KN G RID+ SP+ Sbjct: 253 PHERAWLDHIYDELGYVDTFRVVRKDADIYSWWSNRGQARAKNVGWRIDYHACSPDWKKR 312 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +A + + SDH PVI+ + Sbjct: 313 TLNAWVYKD----SWFSDHAPVIIDYQL 336 >gi|326560422|gb|EGE10804.1| catabolite repression control protein [Moraxella catarrhalis 7169] gi|326565843|gb|EGE16005.1| catabolite repression control protein [Moraxella catarrhalis BC1] gi|326571181|gb|EGE21205.1| catabolite repression control protein [Moraxella catarrhalis BC7] Length = 336 Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats. Identities = 64/268 (23%), Positives = 110/268 (41%), Gaps = 12/268 (4%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE--T 59 V+ V + NVN +RA W+ +N D++C+QE++ + + + + +H Sbjct: 74 VLRVVSINVNGLRAAEKKGFFEWLAVSNADVVCIQESRITHEQWT-DKFRPKGWHTHLFA 132 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL---YLPHG 116 + Y GVAI S+ + +V L D D Q RFI A F ++ Q + Sbjct: 133 AQKAGYAGVAIYSRLPFVSVVDGLGFDLADSQGRFICAQFDLSAQGIDHPVYIASLYLPS 192 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 K +++++ Q + + LI GDYNI+ + D N + + Sbjct: 193 GSSGEEAQARKDLFLEKYRHILKQWRDENKSLIVCGDYNIVHKRIDIKNWSGNQKASGCL 252 Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E +G+ D R +YS+W + +KN G RID+ SP+ Sbjct: 253 PHERAWLDHIYDELGYVDTFRVVRKDADIYSWWSNRGQARAKNVGWRIDYHACSPDWKKR 312 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +A + + SDH PVI+ + Sbjct: 313 TLNAWVYKD----SWFSDHAPVIIDYQL 336 >gi|260808574|ref|XP_002599082.1| hypothetical protein BRAFLDRAFT_225146 [Branchiostoma floridae] gi|229284358|gb|EEN55094.1| hypothetical protein BRAFLDRAFT_225146 [Branchiostoma floridae] Length = 272 Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats. Identities = 71/263 (26%), Positives = 117/263 (44%), Gaps = 17/263 (6%) Query: 4 VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ----SLNYHIE 58 + +A+WNV+ +R N A+I + +PDIICLQETK +K+ P E Y Sbjct: 14 LKIASWNVDGLRGTVKKNGHAYIPQEDPDIICLQETKCTEKDVPKEFTATVEGYHGYWYS 73 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 +K Y G A+LSK +PI++ + D+ D + R I A F + Y+P+ Sbjct: 74 PTEKKGYAGTALLSKTKPIKVTYGIGVDEHDDEGRVITAEFD----DFYMVTAYVPNAG- 128 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT-- 176 + D + +W + F + + L+ ++P++ GD N+ D NP +N Sbjct: 129 RGLVRLDYRGTWDEAFTAYLKK-LDKKKPVVLCGDLNVAHNEIDLKNPKGNKNKTPGFTD 187 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 E L + Y+FW Y + +KN G R+D+ +LS L Sbjct: 188 KEREGFTTLLDEGFKDSYRELYPEETDCYTFWSYMGGARAKNVGWRLDYFVLSDRLMPQL 247 Query: 237 HSARIDTKPRGWTKPSDHTPVIV 259 I ++ G SDH P+++ Sbjct: 248 CDNVIRSEVMG----SDHCPIVL 266 >gi|221069494|ref|ZP_03545599.1| exodeoxyribonuclease III Xth [Comamonas testosteroni KF-1] gi|220714517|gb|EED69885.1| exodeoxyribonuclease III Xth [Comamonas testosteroni KF-1] Length = 271 Score = 161 bits (406), Expect = 1e-37, Method: Composition-based stats. Identities = 64/272 (23%), Positives = 115/272 (42%), Gaps = 16/272 (5%) Query: 2 SVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFP--FETLQSLNYHIE 58 S+ + + N+N IR+ AWI+ PD IC+QE K + + FE L + + Sbjct: 4 SLFKLTSLNLNGIRSATTKGAEAWIEATAPDCICVQEIKAQASDMAGRFEVLAGMKGYFH 63 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 +K Y+GV + ++++P ++V D+ D + R++E F T+ L + + Y P G+ Sbjct: 64 FAEKKGYSGVGVYTRHEPSDVVVGFDIDEFDAEGRYVETRFDTPTRKLSVISAYFPSGSS 123 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + + L+ E + GD NI Q D N + ++ F E Sbjct: 124 GELR--QEAKFRFLAKMHSHLMHLKAERDFVLCGDINIAHQQADLKNWRGNQKNSGFLPE 181 Query: 179 VRQSFQKLQNMGFTD-------AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 R KL + + T Y++W +++ N G R+D+ + +P Sbjct: 182 ERDWMTKLLHKTEISGGLVDVYRLLQPDTTDACYTWWSNRGQAYANNVGWRLDYHLATPA 241 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +L + I K SDH P+ + D+ Sbjct: 242 VAALARTESIYK----GEKFSDHAPITIGYDL 269 >gi|299768386|ref|YP_003730412.1| catabolite repression control protein [Acinetobacter sp. DR1] gi|298698474|gb|ADI89039.1| catabolite repression control protein [Acinetobacter sp. DR1] Length = 274 Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats. Identities = 61/268 (22%), Positives = 110/268 (41%), Gaps = 9/268 (3%) Query: 2 SVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 ++ V + NVN +R+ + L W+++++ D++C+QE++ + + E + +H Sbjct: 12 KILRVVSINVNGLRSSVTKGLLEWLEQSDADVVCMQESRITHEQWT-EKFRPEGWHTHLF 70 Query: 61 GQKS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + Y G AI S+ + + L + D Q RFI A F + Sbjct: 71 PAERAGYAGTAIYSRLPFVSVKDGLGFELADSQGRFISAEFDLGLSHPVHIASLYLPSGS 130 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL- 177 K ++ + + Q + + +I GDYNI+ + D N + + Sbjct: 131 SGEEAQARKDLFLGEYAKILKQWRDENKSVIICGDYNIVHKRIDIKNWSGNQKSSGCLPH 190 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 E +G+ D R LYS+W + +KN G RID+ SP+ + + Sbjct: 191 ERAWLDHIYDELGYVDTFRVVRAEAELYSWWSNRGQARAKNVGWRIDYQACSPDWKTRVA 250 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDIPE 265 +A + SDH PVI+ I E Sbjct: 251 NAWVFKD----QWFSDHAPVIIDYKIQE 274 >gi|226305494|ref|YP_002765454.1| exodeoxyribonuclease [Rhodococcus erythropolis PR4] gi|226184611|dbj|BAH32715.1| putative exodeoxyribonuclease [Rhodococcus erythropolis PR4] Length = 278 Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats. Identities = 67/268 (25%), Positives = 112/268 (41%), Gaps = 15/268 (5%) Query: 5 TVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNF--PFETLQSLNYHIETCG 61 T+ + NVN +RA + W+++ + D ICLQET+ D E + + + Sbjct: 14 TITSVNVNGVRAAARKGMLDWLEKTSADFICLQETRASDDQLRETLEPALGNGWFLVSAE 73 Query: 62 Q--KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 K NGVA+LS+ +P + D+ R+IEA F L + +LYLP G + Sbjct: 74 PSAKGRNGVAVLSRTEPDAVRIGHGDDEFLDAGRYIEADFA----DLTVASLYLPSGEAL 129 Query: 120 TSTKYD---DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 T + + S+ A+ + ++ +GD+NI D N + + F Sbjct: 130 TPKQEEKERFMASFAVHLATTAAAAEAADRHVVVSGDWNIAHTELDLKNWKTNKKSSGFL 189 Query: 177 LEVRQSFQ--KLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 E R ++ + D R H YS+W Y ++ + G RID+ + + Sbjct: 190 SEERAWMDLLFAEDSAWVDVFRTLHPGVDGPYSWWSYRGKAFDNDSGWRIDYQVATRGYA 249 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSL 261 A ++ + SDH PV VS Sbjct: 250 ERAKVALVERAESYDLRWSDHAPVTVSY 277 >gi|326573473|gb|EGE23441.1| catabolite repression control protein [Moraxella catarrhalis 101P30B1] Length = 336 Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats. Identities = 64/268 (23%), Positives = 110/268 (41%), Gaps = 12/268 (4%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE--T 59 V+ V + NVN +RA W+ +N D++C+QE++ + + + + +H Sbjct: 74 VLRVVSINVNGLRAAEKKGFFEWLAVSNADVVCIQESRITHEQWT-DKFRPKGWHTHLFA 132 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL---YLPHG 116 + Y GVAI S+ + +V L D D Q RFI A F ++ Q + Sbjct: 133 AQKAGYAGVAIYSRLPFVSVVDGLGFDLADSQGRFICAQFDLSAQGIDHPVYIASLYLPS 192 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 K +++++ Q + + LI GDYNI+ + D N + + Sbjct: 193 GSSGEEAQARKDLFLEKYRHILKQWRDENKSLIVCGDYNIVHKRIDIKNWSGNQKASGCL 252 Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E +G+ D R +YS+W + +KN G RID+ SP+ Sbjct: 253 PHERAWLDHIYDELGYVDTFRVVRKDADIYSWWSNRGQARAKNVGWRIDYHACSPDWKKR 312 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +A + + SDH PVI+ + Sbjct: 313 TLNAWVYKD----SWFSDHAPVIIDYQL 336 >gi|282852873|ref|ZP_06262214.1| exodeoxyribonuclease III [Lactobacillus gasseri 224-1] gi|282555981|gb|EFB61602.1| exodeoxyribonuclease III [Lactobacillus gasseri 224-1] Length = 254 Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats. Identities = 66/261 (25%), Positives = 109/261 (41%), Gaps = 12/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + H + + DI +Q+T+ E + L + + Sbjct: 1 MKFMSWNVNGLRAALRHGFVNTFTDLDADIFAIQDTRVEPNEVQID-LPGYYQYWNYAKR 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y G A+ +K +PI + ++D + R I F+ I G + Sbjct: 60 KGYAGTAVFTKEKPITVANGFGVPEVDGEGRSITLEFSNFYF---IDVQVPFSGEKLQRL 116 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + + R L +P+I GD ++ D P A FT R+ Sbjct: 117 DFRELWAQTFRNYVTK---LMQYKPVIIGGDMSVAHDKIDLAEPDDNHRHAGFTGIERKE 173 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F +L N GF D R H Y++W Y D+ +KN G R+D+ ++S + +A+I Sbjct: 174 FSELLNAGFIDTFRYFHPDEAKYTYWSYREDARAKNIGWRLDYFLVSNNLEDKMINAQIL 233 Query: 243 TKPRGWTKPSDHTPVIVSLDI 263 G SDH P+ + LDI Sbjct: 234 NNIMG----SDHCPIELDLDI 250 >gi|325962565|ref|YP_004240471.1| exodeoxyribonuclease III [Arthrobacter phenanthrenivorans Sphe3] gi|323468652|gb|ADX72337.1| exodeoxyribonuclease III [Arthrobacter phenanthrenivorans Sphe3] Length = 273 Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 62/269 (23%), Positives = 107/269 (39%), Gaps = 10/269 (3%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +A+ NVN +RA +AAW++ DI+CLQE + D + Sbjct: 6 LRIASVNVNGLRAAFKNGMAAWLEPREVDILCLQEVRAPDAIVRQLLGDGWHILHSEAEA 65 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT-----QTLRIGNLYLPHGN 117 K GVAI S+ +P+ + D R++EA F + L + + Y+ G Sbjct: 66 KGRAGVAIASREEPLATRDGIGDDYFATAGRWVEADFRLTDSAGERVQLTVASAYVHSGE 125 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + + K DDK ++ + + + + GD N+ P D N A Sbjct: 126 -VGTPKQDDKFRFLDVMTTRLPELSKHSDHALVVGDLNVAHTPLDIRNSKGNVKKAGHLP 184 Query: 178 EVRQSFQKLQNMGFTDAIRATH---DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R F + + Y++W ++ + G RID+ + +P + Sbjct: 185 EERAYFDRFFGEEIGWHDVHRNLAGQVDGPYTWWSQRGKAFDNDTGWRIDYHLATPALAA 244 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 SA +D P T+ SDH P++V + Sbjct: 245 SAISAVVDRAPSWDTRFSDHAPLVVDYQL 273 >gi|23335380|ref|ZP_00120616.1| COG0708: Exonuclease III [Bifidobacterium longum DJO10A] gi|189439121|ref|YP_001954202.1| exonuclease III [Bifidobacterium longum DJO10A] gi|239621234|ref|ZP_04664265.1| exodeoxyribonuclease III [Bifidobacterium longum subsp. infantis CCUG 52486] gi|189427556|gb|ACD97704.1| Exonuclease III [Bifidobacterium longum DJO10A] gi|239515695|gb|EEQ55562.1| exodeoxyribonuclease III [Bifidobacterium longum subsp. infantis CCUG 52486] Length = 286 Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 63/286 (22%), Positives = 105/286 (36%), Gaps = 26/286 (9%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI---- 57 +T+ T NVN IRA + W ++ PD+ C+QE + + + Sbjct: 2 TITITTSNVNGIRAAKRKGIEDWAGKHAPDVWCIQEVRAPQDDVDS-IFDEFGFEYATAG 60 Query: 58 ------------ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR--FIEATFTINT 103 E C K GV +L+ + ++ LPG DV + T Sbjct: 61 KIEAPANLHAMNEVCRVKGRAGVGLLTDLEVLDKRYGLPGLSEDVDSGRWIETDVKTPEG 120 Query: 104 QTLRIGNLYLPHGNP----ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159 + + ++Y+ GN KY + +KR + + + GD+NI Sbjct: 121 YAITVASVYVHAGNTDYPTKMEQKYRFLDTMLKRMGALRDEAAHGGKQAVLCGDFNIAHT 180 Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSWSK 217 P D N E A F E R K + + + D Y++W ++ Sbjct: 181 PLDIKNAKANEKHAGFLPEERAYVDKWLDEYEFVDVMRSLAGDIQGPYTWWSQRGRAFDN 240 Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 N G RID+ +PE ID P + SDH P+ ++ ++ Sbjct: 241 NVGWRIDYQFATPELAETARGFVIDKAPTYDKRWSDHAPLTITYEV 286 >gi|153006976|ref|YP_001381301.1| exodeoxyribonuclease III Xth [Anaeromyxobacter sp. Fw109-5] gi|152030549|gb|ABS28317.1| exodeoxyribonuclease III Xth [Anaeromyxobacter sp. Fw109-5] Length = 248 Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 61/259 (23%), Positives = 107/259 (41%), Gaps = 13/259 (5%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + TWNVN IRAR +A WI +PD++CLQE K P + Y G Sbjct: 1 MKIGTWNVNGIRAREAQVAEWIAREHPDVVCLQEIKAPPARVPPSLCELEGYWCLWHGAT 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +Y+GV + + + D D++ R A + + ++Y+P+G Sbjct: 61 AYSGVGLHVRRELAAERPAFTHPDFDLETRIAVAEVAG----VTVASVYVPNGGKD---- 112 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ +++ R+ PL+ AGD N+ D + + R F Sbjct: 113 YPAKLRFLEALDRWVEAACAAGRPLVVAGDLNVARTDQDVHPKERKAGAIGQRPDERAVF 172 Query: 184 QKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 +++ + G D RA L+++W + + +N G RID++++S + Sbjct: 173 ERILSHGLVDLGRAMDPTNEGLFTYWAPWRNLRQRNIGWRIDYVLVSAALARRATRCAVL 232 Query: 243 TKPRGWTKPSDHTPVIVSL 261 SDH P++ L Sbjct: 233 AD----FGTSDHAPLVAEL 247 >gi|302783529|ref|XP_002973537.1| hypothetical protein SELMODRAFT_99746 [Selaginella moellendorffii] gi|300158575|gb|EFJ25197.1| hypothetical protein SELMODRAFT_99746 [Selaginella moellendorffii] Length = 306 Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 61/274 (22%), Positives = 112/274 (40%), Gaps = 25/274 (9%) Query: 2 SVVTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFETLQ 51 ++V V +WNVN +RA + LA + D++CLQETK ++K+ + Sbjct: 36 NLVKVISWNVNGLRACMKRKNELEEEGSALARLADSEDFDVLCLQETKLQEKDVEAIKQK 95 Query: 52 SLNYHIETCG-----QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 L + + + Y+G A++S+ +P+ + L D + R + A F Sbjct: 96 ILGGYSNSFWTCSTSKLGYSGCALISRIKPLSVTYGLGISQHDGEGRVVTAEFDTF---F 152 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 + G + + + LE +P+I GD N + D Y+P Sbjct: 153 LVSVYVPNSGQRLER--LTYRTTEWDPAFSTYLLELEKRKPVIVTGDLNCAHEEIDIYDP 210 Query: 167 IIWENDACFT-LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225 + A FT E + G D R H +++W Y +++ +NKG R+D+ Sbjct: 211 DGNKRSAGFTSEERTSFQTNFIDKGLVDTFRKQHPLAVGFTYWSYRSNARPQNKGWRLDY 270 Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 ++S + + + + G SDH P+ + Sbjct: 271 FLVSQGLVCSVADSYVLPQLDG----SDHCPIGL 300 >gi|157828223|ref|YP_001494465.1| exodeoxyribonuclease III [Rickettsia rickettsii str. 'Sheila Smith'] gi|157800704|gb|ABV75957.1| exodeoxyribonuclease III [Rickettsia rickettsii str. 'Sheila Smith'] Length = 271 Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 78/269 (28%), Positives = 122/269 (45%), Gaps = 7/269 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62 + + TWN+NS+R RI L E+ PDII LQETK D FP E ++++ Y H+ GQ Sbjct: 1 MQIVTWNINSLRLRIDLLRKLAYEHQPDIILLQETKVADSLFPLEVIKNIGYEHVIYSGQ 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 KSYNGVAI+SK+ + + + + I+ + + +T Sbjct: 61 KSYNGVAIISKFPLNNVFSLELYNSDKRHIAAMVNDIEIHNFYV---PAGGDIPDIEVNT 117 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K+ K+ +I+ + + + +I GD NI P HD ++ N T R Sbjct: 118 KFKHKLEYIRLMQEWLTTNRTKNDKMIIVGDLNIAPHEHDVWSSKQLRNVISHTDIERSL 177 Query: 183 FQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLLHSA 239 +LQN + Y++W Y W K N+G R+DHI +S L S Sbjct: 178 LVELQNALGFIDSSRHFVSLDEKFYTWWSYRNIDWKKSNRGRRLDHIWVSDNLKGALFSM 237 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268 + ++ R W PSDH P V+ ++ + Sbjct: 238 HLLSEARDWFSPSDHVPYFVTFNLQMSSR 266 >gi|254457926|ref|ZP_05071353.1| exodeoxyribonuclease III [Campylobacterales bacterium GD 1] gi|207085319|gb|EDZ62604.1| exodeoxyribonuclease III [Campylobacterales bacterium GD 1] Length = 249 Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 66/256 (25%), Positives = 96/256 (37%), Gaps = 14/256 (5%) Query: 12 NSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETCGQKSYNGV 68 N +RA WI E PDI+CLQE K + P + + + + +K Y+G Sbjct: 4 NGVRAVANKEALKWIDERQPDILCLQEIKALEDQIPKDMFEKEYQDIIVNSAIKKGYSGT 63 Query: 69 AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKI 128 S Q T L D + I + N + K+ Sbjct: 64 MTWSILQNSYNSTCLDIDTMGEGRIVETHYDDIVLFNVYFPN------GQKDEERLAYKM 117 Query: 129 SWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN 188 + FL + + E + +I GD N + D NP + F R+ KL N Sbjct: 118 KFYDDFLDYCEKLRENGKSIIICGDVNTAHKEIDLKNPKANSKTSGFLPIEREWMDKLVN 177 Query: 189 MGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRG 247 G+ D R + YS+W Y + + KN G RID+ +S + L A I G Sbjct: 178 HGYIDTFRYVNGDEIDRYSWWSYRSGARLKNVGWRIDYFFISEDLAENLEDAFILDYIEG 237 Query: 248 WTKPSDHTPVIVSLDI 263 SDH PV + L I Sbjct: 238 ----SDHCPVGIKLSI 249 >gi|315636243|ref|ZP_07891495.1| exodeoxyribonuclease III [Arcobacter butzleri JV22] gi|315479452|gb|EFU70133.1| exodeoxyribonuclease III [Arcobacter butzleri JV22] Length = 262 Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 63/261 (24%), Positives = 102/261 (39%), Gaps = 8/261 (3%) Query: 5 TVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETL-QSLNYHIETCGQ 62 +WNVN IRA + WI E D++ +QETK+ P + + Sbjct: 6 KFISWNVNGIRAVDKKDALKWIDEIEVDLLGVQETKSMKDQIPKTIFSKEFKTLFASASA 65 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 L + D+ + R E F + + + N+Y P+G + Sbjct: 66 IKGRSGTALFSDIEPTFQSICESVDILDEGRINEIHFNLADKNIAFFNVYFPNGQ-SSQE 124 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + D K+ + RFL + + +I GD N D P EN + F R Sbjct: 125 RLDYKMEFYDRFLNHCENLKKDGKSIIVCGDVNTAHTEIDIARPKANENTSGFLQMERDW 184 Query: 183 FQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 K + G+ D R + D YS+W Y A++ + N G RID+ +S + + A I Sbjct: 185 ITKFLSHGYIDTFRLINGDIKDKYSWWSYRANARANNVGWRIDYFYVSSDLKDYVKDAYI 244 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 G SDH P+ + ++ Sbjct: 245 LDNIEG----SDHCPIGLEME 261 >gi|148225041|ref|NP_001085229.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Xenopus laevis] gi|47937489|gb|AAH72056.1| MGC78928 protein [Xenopus laevis] Length = 316 Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 73/263 (27%), Positives = 120/263 (45%), Gaps = 16/263 (6%) Query: 3 VVTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQ----SLNYHI 57 + +++WNV+ IRA I W++E +P I+CLQE K +K P + Y Sbjct: 60 TLKISSWNVDGIRAWIKKQGLNWVREEDPHIMCLQEIKCAEKLLPPDVKDMPEYPHKYWA 119 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 ++ Y+GVA+L K +P+ + + ++ D + R I A F + Sbjct: 120 CPDEKEGYSGVAMLCKDKPLNVTYGIGIEEHDKEGRVITAEFDSF-----FVIAAYIPNS 174 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + D + W F + L+ ++PLI GD N+ Q D NP + FT Sbjct: 175 SRGLVRLDYRQRWDVDFRAYLKG-LDSKKPLILCGDLNVAHQEIDLKNPKTNKKTPGFTP 233 Query: 178 EVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 + RQ F +L G+ D+ R + Y+FW Y ++ +KN G R+D+ +LS L Sbjct: 234 QERQGFGELLAEGYLDSFRELYPDKPSAYTFWTYMMNARAKNVGWRLDYFVLSKALRPAL 293 Query: 237 HSARIDTKPRGWTKPSDHTPVIV 259 +I +K G SDH P+ + Sbjct: 294 CDCKIRSKVMG----SDHCPITL 312 >gi|291457695|ref|ZP_06597085.1| exodeoxyribonuclease III [Bifidobacterium breve DSM 20213] gi|291380748|gb|EFE88266.1| exodeoxyribonuclease III [Bifidobacterium breve DSM 20213] Length = 286 Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 63/286 (22%), Positives = 105/286 (36%), Gaps = 26/286 (9%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI---- 57 +T+ T NVN IRA + W ++ PD+ C+QE + + + Sbjct: 2 TITITTSNVNGIRAAKRKGIEDWAGKHAPDVWCMQEVRAPQDDVDS-IFDEFGFEYATAG 60 Query: 58 ------------ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR--FIEATFTINT 103 E C K GV +L+ + ++ LPG DV + T Sbjct: 61 KIDAPADLHTMNEVCRVKGRAGVGLLTDLEVLDKRYGLPGLSEDVDSGRWIETDVKTPEG 120 Query: 104 QTLRIGNLYLPHGNPITS----TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159 T+ + ++Y+ GN KY + + R + + + GD+NI Sbjct: 121 YTITVASVYIHAGNTDDPTKMEQKYRFLDTMLARMGALRDEAAHGGKQAVLCGDFNIAHT 180 Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSWSK 217 P D N E A F E R K + + + D Y++W ++ Sbjct: 181 PLDIKNAKANEKHAGFLPEERAYVDKWLDEYEFVDVMRSLAGDIQGPYTWWSQRGRAFDN 240 Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 N G RID+ +PE ID P + SDH P+ ++ ++ Sbjct: 241 NVGWRIDYQFATPELAETARGFVIDKAPTYDKRWSDHAPLTITYEV 286 >gi|323144610|ref|ZP_08079198.1| exodeoxyribonuclease III [Succinatimonas hippei YIT 12066] gi|322415619|gb|EFY06365.1| exodeoxyribonuclease III [Succinatimonas hippei YIT 12066] Length = 268 Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats. Identities = 71/270 (26%), Positives = 105/270 (38%), Gaps = 22/270 (8%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET--- 59 + +A+WNVN IRA W + D+I LQETK + P + YH Sbjct: 3 IKLASWNVNGIRAVSAKEDWKWFSDCGYDVISLQETKASVEQMPESITDPVGYHAYFASS 62 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN-- 117 +K Y+G A+ SK +P+ LP + + R + F N Y P+G Sbjct: 63 IVKKGYSGTAVFSKKEPLSHEIELPDPEFQGEGRIVHLEFE----KFHFFNGYFPNGGAD 118 Query: 118 -------PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170 P K +Q+L +P++ GD+NI D P Sbjct: 119 ILDESGKPTGEFKRVPYKMAFFDSFFKYAQKLRESKPIVVCGDFNIAHNEIDLARPKTNV 178 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 + F R K G+ D R H D Y++W Y + +KN G RID+ +S Sbjct: 179 KNTGFLPLERAFLDKFVAAGYIDTFRFVHGDLKDQYTWWSYKTRARAKNVGWRIDYFFVS 238 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 E + A I+ G SDH P+ + Sbjct: 239 EELKENIKDAWIENDVFG----SDHCPIGL 264 >gi|23008040|ref|ZP_00049649.1| COG0708: Exonuclease III [Magnetospirillum magnetotacticum MS-1] Length = 237 Score = 159 bits (403), Expect = 3e-37, Method: Composition-based stats. Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 3/237 (1%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 M V +ATWN+NS+RAR+ A+++ D++ LQETK D FP ++ Y + Sbjct: 1 MGPVRLATWNINSVRARVDRAVAFLERTGTDVLALQETKCTDAQFPVAPFEAAGYEVAHV 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 G +NGVA++S+ ++ T PG A +R+ +LY+PHG + Sbjct: 61 GVNQWNGVAVVSRVGLDDVETSFPGQPAFGDKVEARALGATCG-GVRVWSLYVPHGREVG 119 Query: 121 STKYDDKISWIKRFLRFASQRLELEE--PLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 Y K+ W+ A+ L + + GD+N+ P D ++ + T Sbjct: 120 DPHYAYKLRWLDELRAQAAGWLAADPAAQVALVGDWNVAPLDTDVWDVAYFAGKTHVTPA 179 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 R +F G+T+ R Y++WDY + +N+G+RID LSP A + Sbjct: 180 ERDAFAAFGAAGYTEVTREAIPAERTYTYWDYQRLRFPRNEGMRIDFAYLSPAAHAR 236 >gi|260550183|ref|ZP_05824396.1| catabolite repression control protein [Acinetobacter sp. RUH2624] gi|260406711|gb|EEX00191.1| catabolite repression control protein [Acinetobacter sp. RUH2624] Length = 280 Score = 159 bits (403), Expect = 3e-37, Method: Composition-based stats. Identities = 61/268 (22%), Positives = 109/268 (40%), Gaps = 9/268 (3%) Query: 2 SVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 ++ V + NVN +R+ + L W+++++ D++C+QE++ + + E + +H Sbjct: 18 KILRVVSINVNGLRSSVTKGLLEWLEQSDADVVCMQESRITHEQWT-EKFRPEGWHTHLF 76 Query: 61 GQKS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + Y G AI S+ + I L + D Q RFI A F + Sbjct: 77 PAERAGYAGTAIYSRLPFVSIKDGLGFELADSQGRFISAEFDLGLSHPVHIASLYLPSGS 136 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL- 177 K ++ + + Q + + +I GDYNI+ + D N + + Sbjct: 137 SGEEAQARKDLFLGEYAKILKQWRDENKSIIICGDYNIVHKRIDIKNWSGNQKSSGCLPH 196 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 E +G+ D R LYS+W + +KN G RID+ SP+ + Sbjct: 197 ERAWLDHIYDELGYVDTFRVVRTEAELYSWWSNRGQARAKNVGWRIDYQACSPDWKARTV 256 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDIPE 265 +A + SDH PVI+ I + Sbjct: 257 NAWVYKD----QWFSDHAPVIIDYKIQD 280 >gi|262370848|ref|ZP_06064172.1| catabolite repression control protein [Acinetobacter johnsonii SH046] gi|262314210|gb|EEY95253.1| catabolite repression control protein [Acinetobacter johnsonii SH046] Length = 272 Score = 159 bits (403), Expect = 3e-37, Method: Composition-based stats. Identities = 61/265 (23%), Positives = 109/265 (41%), Gaps = 7/265 (2%) Query: 2 SVVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFET-LQSLNYHIET 59 ++ V + NVN +R+ + WI ++ D+IC+QE++ + + + + + H+ Sbjct: 12 KILRVVSINVNGLRSAEKKGIFDWIATSDADVICMQESRITHEQWTNKFKPEGWHTHLFP 71 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 + Y G AI S+ + + L + D Q RFI A F + Sbjct: 72 AERPGYAGTAIYSRLPFVSVTDGLGFELADSQGRFISAEFDLGLDQNVHICSLYLPSGSS 131 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-E 178 K +++ + + Q + + +I GDYNI+ + D N + + E Sbjct: 132 GEEAQVRKDHFLEEYKQILKQWRDENKSVIVCGDYNIVHKRIDIKNWSGNQKASGCLPHE 191 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 +G+ D R LYS+W + +KN G RID+ SP+ + + Sbjct: 192 RSWLDHIYDELGYVDTFREVRPEAELYSWWSNRGQARAKNVGWRIDYQACSPDWKARTVN 251 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263 A + + T SDH PVI+ I Sbjct: 252 AWVYKE----TWFSDHAPVIIDYKI 272 >gi|296138677|ref|YP_003645920.1| exodeoxyribonuclease III Xth [Tsukamurella paurometabola DSM 20162] gi|296026811|gb|ADG77581.1| exodeoxyribonuclease III Xth [Tsukamurella paurometabola DSM 20162] Length = 272 Score = 159 bits (403), Expect = 3e-37, Method: Composition-based stats. Identities = 60/277 (21%), Positives = 104/277 (37%), Gaps = 19/277 (6%) Query: 4 VTVATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKN----FPFETLQS 52 + + + NVN IRA + + W++E D++ LQE + K + Sbjct: 1 MIITSINVNGIRAAVKQRSEENLGMLPWLRETKADVVALQEVRATHKQSLAALAPALDEG 60 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 + NGVA+LS+ +P + + D R++EA F L +G+LY Sbjct: 61 WHLSAAESSTAGRNGVAVLSRREPDAVRIGFGSAEFDETGRYLEADFG----DLTVGSLY 116 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 LP G+ + + + D+K + F + + GD+NI D N + Sbjct: 117 LPSGD-VGTERQDEKDRFRAEFGEYLGTLGRRRRKAVVCGDWNIGHTELDIKNWKGNVKN 175 Query: 173 ACFTLEVRQSFQKLQNM---GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 + F E R T Y++W + ++ + G RID + + Sbjct: 176 SGFLPEERAWMSTYIGAGRPFTDVVRELHPGTPGPYAWWSWRGKAFDNDSGWRIDLQIAN 235 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEP 266 +AR++ + SDH PV V P Sbjct: 236 NALAQHATAARVERAEAYSLRWSDHAPVTVEYSCDMP 272 >gi|326388588|ref|ZP_08210181.1| exodeoxyribonuclease III [Novosphingobium nitrogenifigens DSM 19370] gi|326206839|gb|EGD57663.1| exodeoxyribonuclease III [Novosphingobium nitrogenifigens DSM 19370] Length = 261 Score = 159 bits (403), Expect = 3e-37, Method: Composition-based stats. Identities = 68/259 (26%), Positives = 111/259 (42%), Gaps = 6/259 (2%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCG 61 ++ +ATWN+NS+R RI + ++ + PD++CLQE K + FP E + L Y H+ G Sbjct: 1 MIEIATWNINSVRLRIDQVERFLTQEKPDVLCLQEIKCAENLFPREMFERLGYGHMAVSG 60 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 QK Y+GVAI+S+ E + + + +E + G+ Sbjct: 61 QKGYHGVAIVSRLPLRETGREDWQANGEARHVGVEI---LGHDLFLDNVYIPAGGDVPDR 117 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + R L+ P + GD+NI P D Y+ T + Sbjct: 118 EANPKFGQKLDFLERMTRWSEGLDRPTLLVGDFNIAPLECDVYDHKALLKVVSHTPVEVE 177 Query: 182 SFQKLQNMGFTDAIRATH--DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + +L + H YS+W Y + +K++G R+DH+ SPE + Sbjct: 178 ALGRLAAAHDWVDLGRKHIPAPERNYSWWSYRSYWRAKDQGRRLDHMWASPEVAARSQGH 237 Query: 240 RIDTKPRGWTKPSDHTPVI 258 R + R W +PSDH P+I Sbjct: 238 RFVEETRRWEQPSDHIPLI 256 >gi|45361461|ref|NP_989307.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Xenopus (Silurana) tropicalis] gi|39794455|gb|AAH64266.1| hypothetical protein MGC76280 [Xenopus (Silurana) tropicalis] gi|51703687|gb|AAH80950.1| hypothetical protein MGC76280 [Xenopus (Silurana) tropicalis] gi|89267865|emb|CAJ83004.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Xenopus (Silurana) tropicalis] Length = 316 Score = 159 bits (403), Expect = 3e-37, Method: Composition-based stats. Identities = 73/263 (27%), Positives = 121/263 (46%), Gaps = 16/263 (6%) Query: 3 VVTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQ----SLNYHI 57 + +++WNV+ IRA I W++E +P I+CLQE K +K P E Y Sbjct: 60 TLKISSWNVDGIRAWIKKQGLNWVREEDPHIMCLQEIKCAEKLLPPEIKDMPEYPHKYWA 119 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 ++ Y+GVA+L K +P+ + + ++ D + R I A F + Sbjct: 120 CPDEKEGYSGVAMLCKDKPLNVTYGIGIEEHDKEGRVITAEFDSF-----FLIAAYVPNS 174 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + D + W F + L+ ++PLI GD N+ Q D NP + FT Sbjct: 175 SRGLVRLDYRQRWDVDFRAYLKG-LDSKKPLILCGDLNVAHQEIDLKNPKTNKKTPGFTP 233 Query: 178 EVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 + RQ F +L G+ D+ R + Y+FW Y ++ +KN G R+D+ +LS L Sbjct: 234 QERQGFGELLAEGYLDSFRELYPDKPSAYTFWTYMMNARAKNVGWRLDYFVLSKALRPAL 293 Query: 237 HSARIDTKPRGWTKPSDHTPVIV 259 +++ +K G SDH P+ + Sbjct: 294 CDSKVRSKIMG----SDHCPITL 312 >gi|294013493|ref|YP_003546953.1| exodeoxyribonuclease III [Sphingobium japonicum UT26S] gi|292676823|dbj|BAI98341.1| exodeoxyribonuclease III [Sphingobium japonicum UT26S] Length = 265 Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 77/268 (28%), Positives = 126/268 (47%), Gaps = 12/268 (4%) Query: 1 MS-VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIE 58 MS +++A+WN+NS+RAR+ + ++ E +PDI+CLQETK + FP + Y H Sbjct: 1 MSQTLSIASWNINSVRARLDIVERFLTEESPDILCLQETKVVNDTFPAGLFRQRGYNHQV 60 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 GQ ++GVAILSK E + + + + +RI N+Y+P G Sbjct: 61 LNGQPMHHGVAILSKIPIREDDRLDWQANGEARHVGVRLDNG-----VRIENVYVPAGGD 115 Query: 119 ITSTKYDDKISWIKRFLRFASQRLEL--EEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + + + K FL Q ++P I GD+NI P D ++ N T Sbjct: 116 VPDREVNPKFGQKLDFLERMIQWSSTLEDKPTILTGDFNIAPMECDVWSHKQLLNVVSHT 175 Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDTHHL-YSFWDYYADSW-SKNKGIRIDHIMLSPEAT 233 E + ++ + D R + Y++W Y A W ++G R+DH+ ++ + Sbjct: 176 PIECEILARLQESNDWVDIGRKFYPAPQRLYTWWSYRARDWAESDRGRRLDHMWMTRDVA 235 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSL 261 S R+ RGW++PSDH P+I Sbjct: 236 EKAVSHRVVEPIRGWSRPSDHVPIITEF 263 >gi|325123873|gb|ADY83396.1| catabolite repression control protein [Acinetobacter calcoaceticus PHEA-2] Length = 274 Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats. Identities = 61/268 (22%), Positives = 109/268 (40%), Gaps = 9/268 (3%) Query: 2 SVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 ++ V + NVN +R+ + L W+++++ D++C+QE++ + + E + +H Sbjct: 12 KILRVVSINVNGLRSSVTKGLLEWLEQSDADVVCMQESRITHEQWT-EKFRPEGWHTHLF 70 Query: 61 GQKS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + Y G AI S+ + + L + D Q RFI A F + Sbjct: 71 PAERAGYAGTAIYSRLPFVSVKDGLGFELADSQGRFISAEFDLGLSHPVHIASLYLPSGS 130 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL- 177 K ++ + + Q + + +I GDYNI+ + D N + + Sbjct: 131 SGEEAQARKDLFLGEYAKILKQWRDENKSVIICGDYNIVHKRIDIKNWSGNQKSSGCLPH 190 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 E +G+ D R LYS+W + +KN G RID+ SP+ + Sbjct: 191 ERAWLDHIYDELGYVDTFRVVRTEAELYSWWSNRGQARAKNVGWRIDYHACSPDWKARTI 250 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDIPE 265 +A + SDH PVI+ I E Sbjct: 251 NAWVYKD----QWFSDHAPVIIDYKIQE 274 >gi|50954256|ref|YP_061544.1| exodeoxyribonuclease III [Leifsonia xyli subsp. xyli str. CTCB07] gi|50950738|gb|AAT88439.1| exodeoxyribonuclease III [Leifsonia xyli subsp. xyli str. CTCB07] Length = 278 Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats. Identities = 56/274 (20%), Positives = 104/274 (37%), Gaps = 15/274 (5%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + VAT NVN IRA + W+ + DI+ +QE + + + + Sbjct: 6 LRVATINVNGIRAAFRRGMGTWLDARDVDILAIQEVRASTDDLLGLLGDEWDILHDPATA 65 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K GVAI S+ + + L D R++EA + + + + + + Y+ G + Sbjct: 66 KGRAGVAIASRRRAVVHRAGLGPAGFDSAGRWLEADYEVGGKAITVVSAYVHSGE-AGTP 124 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K DK +++ E + GD N+ + D N A F E R Sbjct: 125 KQADKYTFLDAVEARLPVLAAHSEHGVVLGDLNVGHRTLDIRNWRGNVKRAGFLPEERAY 184 Query: 183 FQKLQN-------------MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 F ++ + + Y++W + ++ + G RID+ + + Sbjct: 185 FDRILGAEDEPGYNDGAGLGWVDVGRKWAGEVDGPYTWWTWRGQAFDNDTGWRIDYQLAT 244 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 P + + +D + SDHTPV+V + Sbjct: 245 PALAATVTDYSVDRAASYAERWSDHTPVVVDYAL 278 >gi|184159856|ref|YP_001848195.1| exonuclease III [Acinetobacter baumannii ACICU] gi|213159082|ref|YP_002321080.1| exodeoxyribonuclease III [Acinetobacter baumannii AB0057] gi|215481899|ref|YP_002324081.1| exodeoxyribonuclease III [Acinetobacter baumannii AB307-0294] gi|239503819|ref|ZP_04663129.1| catabolite repression control protein [Acinetobacter baumannii AB900] gi|294836682|ref|ZP_06781365.1| catabolite repression control protein [Acinetobacter sp. 6013113] gi|294841525|ref|ZP_06786208.1| catabolite repression control protein [Acinetobacter sp. 6014059] gi|294860364|ref|ZP_06798133.1| catabolite repression control protein [Acinetobacter sp. 6013150] gi|301347005|ref|ZP_07227746.1| catabolite repression control protein [Acinetobacter baumannii AB056] gi|301510728|ref|ZP_07235965.1| catabolite repression control protein [Acinetobacter baumannii AB058] gi|301597923|ref|ZP_07242931.1| catabolite repression control protein [Acinetobacter baumannii AB059] gi|183211450|gb|ACC58848.1| Exonuclease III [Acinetobacter baumannii ACICU] gi|193078676|gb|ABO13730.2| catabolite repression control protein [Acinetobacter baumannii ATCC 17978] gi|213058242|gb|ACJ43144.1| exodeoxyribonuclease III [Acinetobacter baumannii AB0057] gi|213986663|gb|ACJ56962.1| exodeoxyribonuclease III [Acinetobacter baumannii AB307-0294] gi|322509770|gb|ADX05224.1| exonuclease III [Acinetobacter baumannii 1656-2] gi|323519783|gb|ADX94164.1| catabolite repression control protein [Acinetobacter baumannii TCDC-AB0715] Length = 274 Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats. Identities = 62/268 (23%), Positives = 109/268 (40%), Gaps = 9/268 (3%) Query: 2 SVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 ++ V + NVN +R+ + L W+++++ D++C+QE++ + + E + +H Sbjct: 12 KILRVVSINVNGLRSSVTKGLLEWLEQSDADVVCMQESRITHEQWT-EKFRPEGWHTHLF 70 Query: 61 GQKS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + Y G AI S+ + I L + D Q RFI A F + Sbjct: 71 PAERAGYAGTAIYSRLPFVSIKDGLGFELADSQGRFISAEFDLGLSHPVHIASLYLPSGS 130 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL- 177 K ++ + + Q + + +I GDYNI+ + D N + + Sbjct: 131 SGEEAQARKDLFLGEYAKILKQWRDENKSIIICGDYNIVHKRIDIKNWSGNQKSSGCLPH 190 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 E +G+ D R LYS+W + +KN G RID+ SP+ + Sbjct: 191 ERAWLDHIYDELGYVDTFRVVRTEAELYSWWSNRGQARAKNVGWRIDYHACSPDWKARTV 250 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDIPE 265 +A + SDH PVI+ I E Sbjct: 251 NAWVYKD----QWFSDHAPVIIDYKIQE 274 >gi|319442381|ref|ZP_07991537.1| exodeoxyribonuclease III [Corynebacterium variabile DSM 44702] Length = 259 Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats. Identities = 77/263 (29%), Positives = 119/263 (45%), Gaps = 18/263 (6%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + VATWN+NS+R R + ++ ++ D++CLQETK D FP Y G Sbjct: 1 MRVATWNINSVRTREARVRDFLSRSDVDVLCLQETKCTDAQFP--DFSDTGYEQAHHGLG 58 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF----TINTQTLRIGNLYLPHGNPI 119 S+NGVA+LS+ E+ T D + + +R+ +LY+P+G I Sbjct: 59 SFNGVAVLSRVGIDEVTTDFGQPGFDKDPAAPQEQEARALGVTCGGVRVWSLYVPNGREI 118 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + Y K+ ++ +A Q P + GD+NI P D ++P + T Sbjct: 119 SDRHYTYKLDFLDALASYAEQEH---RPTVVTGDFNITPTDDDVWDPSFFVGKTHVTPRE 175 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML---SPEATSLL 236 R + + L++ G T+A H YS+WDY A + + +GIRID +P Sbjct: 176 RDALRHLEDAGLTEATATLH---GRYSYWDYQAMRFQRGQGIRIDLQYCRGITPADDP-- 230 Query: 237 HSARIDTKPRGWTKPSDHTPVIV 259 +D R SDH PVIV Sbjct: 231 -EPWVDVDERRGKGASDHAPVIV 252 >gi|293610563|ref|ZP_06692863.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292826907|gb|EFF85272.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 280 Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats. Identities = 61/268 (22%), Positives = 109/268 (40%), Gaps = 9/268 (3%) Query: 2 SVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 ++ V + NVN +R+ + L W+++++ D++C+QE++ + + E + +H Sbjct: 18 KILRVVSINVNGLRSSVTKGLLEWLEQSDADVVCMQESRITHEQWT-EKFRPEGWHTHLF 76 Query: 61 GQKS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + Y G AI S+ + + L + D Q RFI A F + Sbjct: 77 PAERAGYAGTAIYSRLPFVSVKDGLGFELADSQGRFISAEFDLGLSHPVHIASLYLPSGS 136 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL- 177 K ++ + + Q + + +I GDYNI+ + D N + + Sbjct: 137 SGEEAQARKDLFLGEYAKILKQWRDENKSVIICGDYNIVHKRIDIKNWSGNQKSSGCLPH 196 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 E +G+ D R LYS+W + +KN G RID+ SP+ + Sbjct: 197 ERAWLDHIYDELGYVDTFRVVRTEAELYSWWSNRGQARAKNVGWRIDYHACSPDWKARTI 256 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDIPE 265 +A + SDH PVI+ I E Sbjct: 257 NAWVYKD----QWFSDHAPVIIDYKIQE 280 >gi|262280501|ref|ZP_06058285.1| catabolite repression control protein [Acinetobacter calcoaceticus RUH2202] gi|262258279|gb|EEY77013.1| catabolite repression control protein [Acinetobacter calcoaceticus RUH2202] Length = 280 Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats. Identities = 61/268 (22%), Positives = 109/268 (40%), Gaps = 9/268 (3%) Query: 2 SVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 ++ V + NVN +R+ + L W+++++ D++C+QE++ + + E + +H Sbjct: 18 KILRVVSINVNGLRSSVTKGLLEWLEQSDADVVCMQESRITHEQWT-EKFRPEGWHTHLF 76 Query: 61 GQKS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + Y G AI S+ + + L + D Q RFI A F + Sbjct: 77 PAERAGYAGTAIYSRLPFVSVKDGLGFELADSQGRFISAEFDLGLSHPVHIASLYLPSGS 136 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL- 177 K ++ + + Q + + +I GDYNI+ + D N + + Sbjct: 137 SGEEAQARKDLFLGEYAKILKQWRDENKSVIICGDYNIVHKRIDIKNWSGNQKSSGCLPH 196 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 E +G+ D R LYS+W + +KN G RID+ SP+ + Sbjct: 197 ERAWLDHIYDELGYVDTFRIVRAEAELYSWWSNRGQARAKNVGWRIDYQACSPDWKTRTT 256 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDIPE 265 +A + SDH PVI+ I E Sbjct: 257 NAWVFKD----QWFSDHAPVIIDYKIQE 280 >gi|264676398|ref|YP_003276304.1| exodeoxyribonuclease III Xth [Comamonas testosteroni CNB-2] gi|262206910|gb|ACY31008.1| exodeoxyribonuclease III Xth [Comamonas testosteroni CNB-2] Length = 267 Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats. Identities = 60/271 (22%), Positives = 111/271 (40%), Gaps = 16/271 (5%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFP--FETLQSLNYHIET 59 + + + N+N IR+ AWI+ PD IC+QE K + + FE L + + Sbjct: 1 MFKLTSLNLNGIRSATTKGAEAWIEATAPDCICVQEIKAQASDMAGRFEVLAGMKGYFHF 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GV + ++++P ++V ++ D + R++E F + + + Y P G+ Sbjct: 61 AEKKGYSGVGVYTRHEPSDVVVGFDIEEFDAEGRYVETRFDTPGRKFSVISAYFPSGSSG 120 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + + L+ E + GD NI Q D N + ++ F E Sbjct: 121 ELR--QEAKFRFLAKMHSHLMHLKAERDFVLCGDINIAHQKEDLKNWRGNQKNSGFLPEE 178 Query: 180 RQSFQKLQNMGFTD-------AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 R KL + T Y++W +++ N G R+D+ + +P Sbjct: 179 RDWMSKLLHKTEAGGGLVDVYRQLQPDTTDACYTWWSNRGQAYANNVGWRLDYHLATPAI 238 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +L + I K SDH P+ + D+ Sbjct: 239 AALARTESIYK----GEKFSDHAPITIGYDM 265 >gi|169634777|ref|YP_001708513.1| catabolite repression control protein [Acinetobacter baumannii SDF] gi|169794343|ref|YP_001712136.1| catabolite repression control protein [Acinetobacter baumannii AYE] gi|260557895|ref|ZP_05830108.1| exodeoxyribonuclease III [Acinetobacter baumannii ATCC 19606] gi|169147270|emb|CAM85129.1| catabolite repression control protein [Acinetobacter baumannii AYE] gi|169153569|emb|CAP02744.1| catabolite repression control protein [Acinetobacter baumannii] gi|260408686|gb|EEX01991.1| exodeoxyribonuclease III [Acinetobacter baumannii ATCC 19606] Length = 280 Score = 159 bits (401), Expect = 4e-37, Method: Composition-based stats. Identities = 62/268 (23%), Positives = 109/268 (40%), Gaps = 9/268 (3%) Query: 2 SVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 ++ V + NVN +R+ + L W+++++ D++C+QE++ + + E + +H Sbjct: 18 KILRVVSINVNGLRSSVTKGLLEWLEQSDADVVCMQESRITHEQWT-EKFRPEGWHTHLF 76 Query: 61 GQKS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + Y G AI S+ + I L + D Q RFI A F + Sbjct: 77 PAERAGYAGTAIYSRLPFVSIKDGLGFELADSQGRFISAEFDLGLSHPVHIASLYLPSGS 136 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL- 177 K ++ + + Q + + +I GDYNI+ + D N + + Sbjct: 137 SGEEAQARKDLFLGEYAKILKQWRDENKSIIICGDYNIVHKRIDIKNWSGNQKSSGCLPH 196 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 E +G+ D R LYS+W + +KN G RID+ SP+ + Sbjct: 197 ERAWLDHIYDELGYVDTFRVVRTEAELYSWWSNRGQARAKNVGWRIDYHACSPDWKARTV 256 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDIPE 265 +A + SDH PVI+ I E Sbjct: 257 NAWVYKD----QWFSDHAPVIIDYKIQE 280 >gi|238022209|ref|ZP_04602635.1| hypothetical protein GCWU000324_02116 [Kingella oralis ATCC 51147] gi|237866823|gb|EEP67865.1| hypothetical protein GCWU000324_02116 [Kingella oralis ATCC 51147] Length = 257 Score = 159 bits (401), Expect = 5e-37, Method: Composition-based stats. Identities = 61/263 (23%), Positives = 114/263 (43%), Gaps = 13/263 (4%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETC 60 + + T NVN IR+ +I ++ DIIC+QE K ++ + E H Sbjct: 1 MRIITANVNGIRSAYKKGFLDYIAQSQADIICVQELKAQEADLSPEMQAPHGMHGVWHCA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 ++ Y+GVA+ SK QP + L + D + R++ A F + Sbjct: 61 QKRGYSGVALYSKRQPDAVQIGLGQPEFDSEGRYVRADFGNLSVI-----SLYLPSGTSA 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K ++ F ++ + ++ GD+NI Q D N + ++ F E R Sbjct: 116 EERQAYKYQFLDAFYPILAELIATGRDIVVCGDWNIAHQNIDIKNWKGNQKNSGFLPEER 175 Query: 181 QSFQKLQ-NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 ++ ++G+ D R + Y++W +++K+ G RID+ M +P + +A Sbjct: 176 AWIGRVIADLGWVDTWRTLYPDVAGYTWWSNRGQAYAKDVGWRIDYQMTTPALAATAQAA 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 + + TK SDH P+++ D Sbjct: 236 HVYKE----TKFSDHAPLVIDYD 254 >gi|28493411|ref|NP_787572.1| exodeoxyribonuclease III [Tropheryma whipplei str. Twist] gi|28476452|gb|AAO44541.1| exodeoxyribonuclease III [Tropheryma whipplei str. Twist] Length = 285 Score = 159 bits (401), Expect = 5e-37, Method: Composition-based stats. Identities = 78/281 (27%), Positives = 124/281 (44%), Gaps = 14/281 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 V V TWNVNSIRAR+ + AW+K D+ LQETK +FP + + Y+ E G + Sbjct: 7 VRVGTWNVNSIRARLERVLAWLKNECIDVAALQETKVRTGDFPVDAFRDAGYYSEAHGLR 66 Query: 64 SYNGVAILSKYQPIEIV------THLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 + GVAI+S++ + D + T +R+ +LY+P+G Sbjct: 67 GFEGVAIVSRFPIRRVTVNIPRAPGFLSDRWGTDIPQEARAISATTGGIRLYSLYVPNGR 126 Query: 118 PITSTKYDDKISWIKRFLRFASQRLE--LEEPLIFAGDYNIIPQPHDCY-NPIIWENDAC 174 + S ++ K++W+K L PL+ GD+NI+ D ND Sbjct: 127 EVGSPHFEYKLAWLKALASHVRTVLRRTPGIPLMLVGDFNIVTCEQDTADPDFQLPNDIT 186 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 + R++FQ + + G D IR ++ W Y + N+G+RID ++ S Sbjct: 187 CSGPEREAFQAILDTGMFDLIRPFAPIG--FTSWSYQRQRFQNNQGLRIDFMLGSDSVQR 244 Query: 235 LLHSARIDTKPRG---WTKPSDHTPVIVSLDIPEPRKKQQD 272 ID R PSDH P++ +D P ++ D Sbjct: 245 RTIWGEIDRVQRRHLFGLTPSDHAPLVSVIDPPRRTFRRDD 285 >gi|299533724|ref|ZP_07047096.1| exodeoxyribonuclease III Xth [Comamonas testosteroni S44] gi|298718273|gb|EFI59258.1| exodeoxyribonuclease III Xth [Comamonas testosteroni S44] Length = 267 Score = 159 bits (401), Expect = 5e-37, Method: Composition-based stats. Identities = 61/271 (22%), Positives = 111/271 (40%), Gaps = 16/271 (5%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFP--FETLQSLNYHIET 59 + + + N+N IR+ AWI+ PD IC+QE K + + FE L + + Sbjct: 1 MFKLTSLNLNGIRSATTKGAEAWIEATAPDCICVQEIKAQASDMAGRFEVLAGMKGYFHF 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GV + ++++P +++ D+ D + R++E F + I + Y P G+ Sbjct: 61 AEKKGYSGVGVYTRHEPSDVIVGFDIDEFDAEGRYVETRFDTPGRKFSIISAYFPSGSSG 120 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + + L+ E + GD NI Q D N + ++ F E Sbjct: 121 ELR--QEAKFRFLAKMHSHLMHLKAERDFVLCGDINIAHQKEDLKNWRGNQKNSGFLPEE 178 Query: 180 RQSFQKLQNMGFTD-------AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 R KL + T Y++W +++ N G R+D+ + +P Sbjct: 179 RDWMSKLLHKTEASGGLVDVYRQLQPDTTDACYTWWSNRGQAYANNVGWRLDYHLATPAI 238 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +L + I K SDH P+ + D+ Sbjct: 239 AALARTESIYK----GEKFSDHAPITIGYDM 265 >gi|15899057|ref|NP_343662.1| exodeoxyribonuclease [Sulfolobus solfataricus P2] gi|284175276|ref|ZP_06389245.1| exodeoxyribonuclease [Sulfolobus solfataricus 98/2] gi|13815592|gb|AAK42452.1| Exodeoxyribonuclease [Sulfolobus solfataricus P2] gi|261600804|gb|ACX90407.1| exodeoxyribonuclease III Xth [Sulfolobus solfataricus 98/2] Length = 247 Score = 159 bits (401), Expect = 5e-37, Method: Composition-based stats. Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 18/261 (6%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + +WN+N +R+ + NL +++ N DI+ QET+ + + Y + + Sbjct: 1 MKIVSWNINGLRSALKKNLVNFLESNTFDIVMFQETR---GDIVPLDFIMMGYEVISFPA 57 Query: 62 -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GV L+K +PI+++ L + D + R + I + G+ + Sbjct: 58 RRKGYSGVMTLTKIKPIKVIKGLQIKEFDDEGRTVSLELK---DFYLINAYFPRAGDNLE 114 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K + +L +P+I GD+NI Q D T + R Sbjct: 115 RLDFKLKFNNGIENF---LLKLREVKPVILCGDFNIAHQSIDAAFSDP--KIPGLTPQER 169 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 F L ++GF D R H YS+W Y ++ KN G+R+D+ ++S E + A Sbjct: 170 AWFTHLLSLGFIDTFRYLHPNVRKYSWWSYMGNAREKNLGLRLDYCIVSEELKDSIKMAD 229 Query: 241 IDTKPRGWTKPSDHTPVIVSL 261 I T +G SDH P+I+ L Sbjct: 230 ILTDVQG----SDHAPIILEL 246 >gi|16082631|ref|NP_394956.1| exonuclease III [Thermoplasma acidophilum DSM 1728] Length = 250 Score = 159 bits (401), Expect = 5e-37, Method: Composition-based stats. Identities = 63/260 (24%), Positives = 101/260 (38%), Gaps = 14/260 (5%) Query: 5 TVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 +WNVN +RA + + K+++ I LQETK + + P E L Y++ K Sbjct: 4 KFLSWNVNGLRAAVKNGAVSVFKQDDYFGIALQETKADSTSVPEEMYH-LGYYLYNNPAK 62 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +S + I G + + + N Sbjct: 63 KKGYSGTMSLVREKPIDV-SYGFENEEGRILNLEFDKFYFINVYFPNAQHGLTRLDMKLD 121 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 +D S L ++PLI GD+N+ + D P EN+A FT + R Sbjct: 122 FD-------EKFLEYSNELRKKKPLIICGDFNVAHEEIDIARPKDNENNAGFTKQERDWM 174 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 K + G+ D R YS+W Y ++ +KN G RID+ ++S + + A I Sbjct: 175 TKFLDSGYVDTYRIFMKEGGHYSWWSYRFNARAKNIGWRIDYFVVSDDIRDRVKKAEILE 234 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 G SDH PV + +D+ Sbjct: 235 TVTG----SDHAPVTLEVDL 250 >gi|229580822|ref|YP_002839221.1| exodeoxyribonuclease III Xth [Sulfolobus islandicus Y.N.15.51] gi|228011538|gb|ACP47299.1| exodeoxyribonuclease III Xth [Sulfolobus islandicus Y.N.15.51] Length = 247 Score = 158 bits (400), Expect = 6e-37, Method: Composition-based stats. Identities = 68/261 (26%), Positives = 111/261 (42%), Gaps = 18/261 (6%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + +WNVN IRA + NL +I+ N ++I QETK + + Y + + Sbjct: 1 MKIVSWNVNGIRAALKKNLIDFIENNMFEVIMFQETK---GDIVPLDFIMMGYEVISFPA 57 Query: 62 -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GV L+K +PI ++ L + D + R + I + G+ + Sbjct: 58 KRKGYSGVMTLTKIKPINVIKGLQIKEFDDEGRTVTLELK---DFYVINAYFPRAGDNLE 114 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K + L +P+I GD+NI Q D T + R Sbjct: 115 RLDFKLKFNNEIENFVLK---LRKAKPVILCGDFNIAHQNIDGA--FSNPTIPGLTPQER 169 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 F ++GF D R H YS+W Y + KN G+R+D+ ++S E + A Sbjct: 170 SWFSHFLSLGFIDTFRYLHPNVRKYSWWSYMGKARDKNLGLRLDYCIVSEELKDRIKMAD 229 Query: 241 IDTKPRGWTKPSDHTPVIVSL 261 I +G SDH P+I+ L Sbjct: 230 ILIDIQG----SDHAPIILEL 246 >gi|311064022|ref|YP_003970747.1| exodeoxyribonuclease III [Bifidobacterium bifidum PRL2010] gi|310866341|gb|ADP35710.1| Xth Exodeoxyribonuclease III [Bifidobacterium bifidum PRL2010] Length = 285 Score = 158 bits (400), Expect = 6e-37, Method: Composition-based stats. Identities = 63/286 (22%), Positives = 96/286 (33%), Gaps = 26/286 (9%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI---- 57 ++T+ T NVN IRA + W E+ PDI C+QE + + Sbjct: 1 MITITTSNVNGIRAAKRKGIETWAGEHAPDIWCMQEVRAPQDELDP-IFGEFGFEYATAG 59 Query: 58 ------------ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR--FIEATFTINT 103 E C K GV +L+ L G D DV + T Sbjct: 60 KIADQSELTAMNEVCRVKGRAGVGLLTDLPVTARRYGLSGLDEDVDSGRWIEADVTTPQG 119 Query: 104 QTLRIGNLYLPHGNPITS----TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159 + + +Y+ GN KY + + R + + GD+NI Sbjct: 120 YGITVACVYVHAGNSDDPVKMAQKYRFLDTMLTRMGELRDEASRGGRQAVLCGDFNIAHT 179 Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSWSK 217 P D N A F R + + + D Y++W ++ Sbjct: 180 PLDIKNAKANIKHAGFLPAERAYIDRWLGEYEFVDVIRSLAGDIQGPYTWWSQRGRAFDN 239 Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 N G RID+ +PE ID P + SDH P+ V+ D+ Sbjct: 240 NVGWRIDYQFATPELAETARGFVIDKAPSYDARWSDHAPLTVTYDV 285 >gi|171060718|ref|YP_001793067.1| exodeoxyribonuclease III Xth [Leptothrix cholodnii SP-6] gi|170778163|gb|ACB36302.1| exodeoxyribonuclease III Xth [Leptothrix cholodnii SP-6] Length = 262 Score = 158 bits (400), Expect = 7e-37, Method: Composition-based stats. Identities = 60/267 (22%), Positives = 108/267 (40%), Gaps = 12/267 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFET--LQSLNYHIETC 60 + + + N+N IR+ + L W++ D + +QE K + + + L + H Sbjct: 1 MRLVSLNLNGIRSAVNKGLIPWVEAAEIDCMGVQELKAQHADLTADMTVLHGMQGHFHCA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GV + S+++P ++V L D D + R++EA + + L I + Y P G+ Sbjct: 61 EKKGYSGVGLYSRHEPSDVVIGLGHADFDAEGRYVEARYDTPQRKLSIISCYFPSGSSGD 120 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + + + L+ + GD NI Q D N ++ F E R Sbjct: 121 ERQQA--KFRFLDLIEPHLRALKAGREFVLMGDVNIAHQEIDLKNWKGNLKNSGFLPEER 178 Query: 181 QSFQKL-QNMGFTDAIRATHDT--HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 +L + G D R Y++W + +KN G RID+ + +P + Sbjct: 179 AWMTRLLGDTGLVDVYRRLRPDATDEAYTWWSNRGQARAKNVGWRIDYHLATPGLAATAR 238 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDIP 264 I SDH P+ + D Sbjct: 239 ETSIYKA----QWFSDHAPLTIDYDFD 261 >gi|224282700|ref|ZP_03646022.1| exodeoxyribonuclease [Bifidobacterium bifidum NCIMB 41171] gi|313139858|ref|ZP_07802051.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB 41171] gi|313132368|gb|EFR49985.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB 41171] Length = 285 Score = 158 bits (399), Expect = 8e-37, Method: Composition-based stats. Identities = 63/286 (22%), Positives = 97/286 (33%), Gaps = 26/286 (9%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI---- 57 ++T+ T NVN IRA + W E+ PDI C+QE + + Sbjct: 1 MITITTSNVNGIRAAKRKGIETWAGEHAPDIWCMQEVRAPQDELDP-IFGEFGFEYATAG 59 Query: 58 ------------ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR--FIEATFTINT 103 E C K GV +L+ LPG D DV + T Sbjct: 60 KIADQSELTAMNEVCRVKGRAGVGLLTDLPVTARRYGLPGLDEDVDSGRWIEADVTTPQG 119 Query: 104 QTLRIGNLYLPHGNPITS----TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159 + + +Y+ GN KY + + R + + GD+NI Sbjct: 120 YGITVACVYVHAGNSDDPVKMAQKYRFLDTMLTRMGELRDEASRGGRQAVLCGDFNIAHT 179 Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSWSK 217 P D N A F R + + + D Y++W ++ Sbjct: 180 PLDIKNAKANIKHAGFLPAERAYVDRWLGEYEFVDVIRSLAGDIQGPYTWWSQRGRAFDN 239 Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 N G RID+ +PE ID P + SDH P+ ++ D+ Sbjct: 240 NVGWRIDYQFATPELAETARGFVIDKAPSYDARWSDHAPLTITYDV 285 >gi|118497430|ref|YP_898480.1| exodeoxyribonuclease III [Francisella tularensis subsp. novicida U112] gi|195536121|ref|ZP_03079128.1| exodeoxyribonuclease III [Francisella tularensis subsp. novicida FTE] gi|118423336|gb|ABK89726.1| exodeoxyribonuclease III [Francisella novicida U112] gi|194372598|gb|EDX27309.1| exodeoxyribonuclease III [Francisella tularensis subsp. novicida FTE] Length = 262 Score = 158 bits (399), Expect = 8e-37, Method: Composition-based stats. Identities = 63/268 (23%), Positives = 115/268 (42%), Gaps = 17/268 (6%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIE 58 ++ V T+N N IRA W K + D +C+QETK + + Y + Sbjct: 1 MIKVMTFNANGIRAAARKGFWEWFKTQDVDFLCIQETKAQFHQLEKDIEHFPTGYYYEFK 60 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 +K Y+G AI +K +P++++ L D D + R+I+ + I +LYLP G+ Sbjct: 61 DAVKKGYSGTAIYAKKKPLKVIKELGLDWADDEGRYIQFDYE----NFSIASLYLPSGS- 115 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF--T 176 + + K+ +++++ +++E I GD+NI+ + D N Sbjct: 116 SGDVRQEYKMQFLEKYKEILKEQVESGRDFIVCGDFNIVHKEIDIKNWKSNYGKTSGVLP 175 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 E ++G+ D R + Y++W + + N G RID+ + +P + Sbjct: 176 EEQAWLDHIFDDLGWVDTFRVINHQPLQYTWWSNRGQARANNVGWRIDYHISTPAIKDKV 235 Query: 237 H--SARIDTKPRGWTKPSDHTPVIVSLD 262 S I + SDH P+ +S D Sbjct: 236 VPESDYIYRE----NWFSDHAPLTISYD 259 >gi|239947787|ref|ZP_04699540.1| exodeoxyribonuclease III [Rickettsia endosymbiont of Ixodes scapularis] gi|239922063|gb|EER22087.1| exodeoxyribonuclease III [Rickettsia endosymbiont of Ixodes scapularis] Length = 279 Score = 158 bits (399), Expect = 9e-37, Method: Composition-based stats. Identities = 78/268 (29%), Positives = 120/268 (44%), Gaps = 7/268 (2%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETC 60 S++ + TWN+NS+ RI L E+ PDII LQETK D FP E ++++ Y H+ Sbjct: 14 SLMKIVTWNINSLHLRIDLLRKLAHEHQPDIILLQETKVADSLFPLEVIKNIGYEHVIYA 73 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 GQKSYNGVAI+SK+ + + I I+ + + Sbjct: 74 GQKSYNGVAIISKFPLNNAFSLELYNSDKRHIAAIVNDIEIHNFYV---PAGGDVPDIEV 130 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 +TK+ K+ +++ + + + +I GD NI P HD ++ N T R Sbjct: 131 NTKFKHKLEYVRLMQEWLTTNRTKNDKIIIVGDLNIAPHEHDVWSSKQLRNVISHTDIER 190 Query: 181 QSFQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLLH 237 +LQN + Y++W Y W K N+G R+DHI +S L Sbjct: 191 SLLVELQNSLGFIDSSRHFVPFDEKFYTWWSYRNIDWKKSNRGRRLDHIWVSDNLKDALF 250 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDIPE 265 S + + R W PSDH P V+ + + Sbjct: 251 SMHLLPEARDWPPPSDHVPYFVNFNFDD 278 >gi|254372791|ref|ZP_04988280.1| exodeoxyribonuclease III [Francisella tularensis subsp. novicida GA99-3549] gi|151570518|gb|EDN36172.1| exodeoxyribonuclease III [Francisella novicida GA99-3549] Length = 262 Score = 158 bits (399), Expect = 9e-37, Method: Composition-based stats. Identities = 63/268 (23%), Positives = 114/268 (42%), Gaps = 17/268 (6%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIE 58 ++ V T+N N IRA W K + D +C+QETK + + Y + Sbjct: 1 MIKVMTFNANGIRAAARKGFWEWFKTQDVDFLCMQETKAQFHQLEKDIEHFPTGYYYEFK 60 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 +K Y+G AI +K +P++++ L D D + R+I+ + I +LYLP G+ Sbjct: 61 DAVKKGYSGTAIYAKKKPLKVIKELGLDWADDEGRYIQFDYE----NFSIASLYLPSGS- 115 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF--T 176 + + K+ +++++ ++ E I GD+NI+ + D N Sbjct: 116 SGDVRQEYKMQFLEKYKEILKEQAESGRDFIVCGDFNIVHKEIDIKNWKSNYGKTSGVLP 175 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 E ++G+ D R + Y++W + + N G RID+ + +P + Sbjct: 176 EEQAWLDHIFDDLGWVDTFRVINHQPLQYTWWSNRGQARANNVGWRIDYHISTPAIKDKV 235 Query: 237 H--SARIDTKPRGWTKPSDHTPVIVSLD 262 S I + SDH P+ +S D Sbjct: 236 VPESDYIYRE----NWFSDHAPLTISYD 259 >gi|238854034|ref|ZP_04644388.1| exodeoxyribonuclease III [Lactobacillus gasseri 202-4] gi|238833354|gb|EEQ25637.1| exodeoxyribonuclease III [Lactobacillus gasseri 202-4] Length = 254 Score = 158 bits (399), Expect = 9e-37, Method: Composition-based stats. Identities = 65/261 (24%), Positives = 107/261 (40%), Gaps = 12/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + H + + DI +Q+T+ E + L + + Sbjct: 1 MKFMSWNVNGLRAALRHGFVNTFTDLDADIFAIQDTRVEANEVQID-LPGYYQYWNYAKR 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y G A+ +K +PI + ++D + R I F I G + Sbjct: 60 KGYAGTAVFTKEKPITVANGFGVPEVDGEGRSITLEFPNFYF---IDVQVPFSGEKLQRL 116 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + + R L +P+I GD ++ + D P A FT R+ Sbjct: 117 DFRELWAQTFRNYVTK---LMQYKPVIIGGDMSVAHEKIDLAEPDDNHRHAGFTGIERKE 173 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F +L N GF D R H Y++W Y D+ +KN G R+D+ + S + + +I Sbjct: 174 FSELLNAGFIDTFRYFHPDEAKYTYWSYREDARAKNIGWRLDYFLASHNLEDKMINTKIL 233 Query: 243 TKPRGWTKPSDHTPVIVSLDI 263 G SDH P+ + LDI Sbjct: 234 NNIMG----SDHCPIELDLDI 250 >gi|50086482|ref|YP_047992.1| catabolite repression control protein [Acinetobacter sp. ADP1] gi|49532458|emb|CAG70170.1| catabolite repression control protein [Acinetobacter sp. ADP1] Length = 285 Score = 158 bits (399), Expect = 9e-37, Method: Composition-based stats. Identities = 61/266 (22%), Positives = 107/266 (40%), Gaps = 7/266 (2%) Query: 2 SVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIET 59 ++ V + NVN +R+ + L W++++ D+IC+QE++ + + Y H+ Sbjct: 24 KILRVVSINVNGLRSSVTKGLLEWLEKSEADVICMQESRITHAQWTDKFKPEGWYTHLFP 83 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 + Y G AI S+ + L + D Q RFI A F + Sbjct: 84 AERAGYAGTAIYSRIPFKSVQDGLGFELADSQGRFIAAEFDLGLNQPAYICSLYLPSGSS 143 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-E 178 K +++++ + Q + + +I GDYNI+ + D N + + E Sbjct: 144 GDEAQARKDVFLEKYAQILKQWRDENKSIIVCGDYNIVHKRIDIKNWSGNQKSSGCLPHE 203 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 +G+ D R LYS+W + +KN G RID+ SP+ + + Sbjct: 204 RAWLDHIYDELGYVDTFREVRPEAELYSWWSNRGQARAKNVGWRIDYHACSPDWKTRTVN 263 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIP 264 A + SDH PVI+ I Sbjct: 264 AWVYRD----EWYSDHAPVIIDYKIS 285 >gi|296135801|ref|YP_003643043.1| exodeoxyribonuclease III Xth [Thiomonas intermedia K12] gi|295795923|gb|ADG30713.1| exodeoxyribonuclease III Xth [Thiomonas intermedia K12] Length = 267 Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats. Identities = 60/267 (22%), Positives = 106/267 (39%), Gaps = 15/267 (5%) Query: 4 VTVATWNVNSIR-ARIHNLAAWIKEN-NPDIICLQETKTEDKNFPFETLQSLNYH---IE 58 + V T N+N IR A + W++ PD++C+QE K + + H + Sbjct: 6 LRVTTLNLNGIRSAANKGVDDWLRSQARPDVLCVQELKALEADMTPGLRTLGGLHGAAFQ 65 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ-TLRIGNLYLPHGN 117 + Y+GV + K++P ++ + D + R++EA + L I + Y P G+ Sbjct: 66 HAEKPGYSGVGLYWKHEPDDVRIGFGHAEFDAEGRYVEAIYKRPGGGRLSIVSAYFPSGS 125 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + L+ ++ GD NI + D N ++ F Sbjct: 126 SSEERQQA--KFRFLADFYEHLLALKAAGEVLLCGDVNIAHKEIDLKNWKGNLKNSGFLP 183 Query: 178 EVRQSFQKLQNMG-FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 E R +L + + D R Y++W + +KN G RID+ + +P + Sbjct: 184 EERAWMTRLIDEAGYVDVFRQLDPAPDRYTWWSNRGQARAKNVGWRIDYHLATPGIAAQA 243 Query: 237 H--SARIDTKPRGWTKPSDHTPVIVSL 261 SA I T+ R SDH P+ + Sbjct: 244 KSDSAWIYTEQR----FSDHAPLTIDY 266 >gi|226529129|ref|NP_001146906.1| LOC100280514 [Zea mays] gi|195604980|gb|ACG24320.1| apurinic endonuclease-redox protein [Zea mays] Length = 510 Score = 158 bits (398), Expect = 1e-36, Method: Composition-based stats. Identities = 65/272 (23%), Positives = 115/272 (42%), Gaps = 23/272 (8%) Query: 4 VTVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTEDKNFPFETLQS---LNYH 56 + + +WNVN ++A + + + + + D++CLQETK ++K+ E ++ Y Sbjct: 250 LKIMSWNVNGLKALLKSRGFSVQQLAQREDFDVLCLQETKMQEKDI--EVIKDTLLDGYT 307 Query: 57 IETCGQK----SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 Y+G AI+S+ +P+ I L D D + R + F + Y Sbjct: 308 NSFWTCSVSKLGYSGTAIISRVKPLSIKYGLGIPDHDTEGRVVTVEFD----DFYLLTAY 363 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 +P+ + +++ L + LE +P+I GD N Q D ++P Sbjct: 364 VPNSG-DGLKRLTYRVTEWDPSLGNYMKELEKSKPVILTGDLNCAHQEIDIHDPAGNRRS 422 Query: 173 ACF-TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 A F E + GF D R H YS+W Y ++ NKG R+D+ ++S Sbjct: 423 AGFTNEERESFGTNFLSKGFVDTFRKQHPNVVAYSYWGYRHNARKTNKGWRLDYFLVSES 482 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +H + I SDH+P+ + L + Sbjct: 483 IAEKVHDSYILPDI----SASDHSPLGLVLKL 510 >gi|195604738|gb|ACG24199.1| apurinic endonuclease-redox protein [Zea mays] Length = 505 Score = 158 bits (398), Expect = 1e-36, Method: Composition-based stats. Identities = 65/272 (23%), Positives = 115/272 (42%), Gaps = 23/272 (8%) Query: 4 VTVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTEDKNFPFETLQS---LNYH 56 + + +WNVN ++A + + + + + D++CLQETK ++K+ E ++ Y Sbjct: 245 LKIMSWNVNGLKALLKSRGFSVQQLAQREDFDVLCLQETKMQEKDI--EVIKDTLLDGYT 302 Query: 57 IETCGQK----SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 Y+G AI+S+ +P+ I L D D + R + F + Y Sbjct: 303 NSFWTCSVSKLGYSGTAIISRVKPLSIKYGLGIPDHDTEGRVVTVEFD----DFYLLTAY 358 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 +P+ + +++ L + LE +P+I GD N Q D ++P Sbjct: 359 VPNSG-DGLKRLTYRVTEWDPSLGNYMKELEKSKPVILTGDLNCAHQEIDIHDPAGNRRS 417 Query: 173 ACF-TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 A F E + GF D R H YS+W Y ++ NKG R+D+ ++S Sbjct: 418 AGFTNEERESFGTNFLSKGFVDTFRKQHPNVVAYSYWGYRHNARKTNKGWRLDYFLVSES 477 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +H + I SDH+P+ + L + Sbjct: 478 IAEKVHDSYILPDI----SASDHSPLGLVLKL 505 >gi|224137778|ref|XP_002322649.1| predicted protein [Populus trichocarpa] gi|222867279|gb|EEF04410.1| predicted protein [Populus trichocarpa] Length = 428 Score = 158 bits (398), Expect = 1e-36, Method: Composition-based stats. Identities = 75/273 (27%), Positives = 117/273 (42%), Gaps = 20/273 (7%) Query: 2 SVVTVATWNVNSIRARIH--NL--AAWIKENNPDIICLQETKTEDKNFPFETLQSL--NY 55 + V + +WNVN +RA + + N D++CLQETK + Q L Y Sbjct: 165 NSVKLMSWNVNGLRALLKFEGFSALELAQRENFDVLCLQETKLQASKDVDSIKQCLIDGY 224 Query: 56 HIETCGQKS----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 + Y+G AI+S+ +P+ + L D D + R + A F + + N Sbjct: 225 ENSFWTCSNAKLGYSGTAIVSRIKPLSVCYGLGIPDHDSEGRVVTAEFD----SFYLVNT 280 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 Y+P+ + +I+ L + LE +P+I GD N Q D +NP + Sbjct: 281 YVPNSG-DGLKRLSYRITQWDPSLSNYMKELEKSKPVILTGDLNCAHQEIDIFNPAGNKR 339 Query: 172 DACFTLEVRQSFQKLQ-NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230 A FT E RQSF + G D R H Y++W Y NKG R+D+ ++S Sbjct: 340 SAGFTEEERQSFGSNFLSKGLVDTFRKQHPNVVGYTYWGYRHGGRKTNKGWRLDYFLVSE 399 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +H + I G SDH P+ + L + Sbjct: 400 SIADKVHDSYIVPDVNG----SDHCPIGLVLKV 428 >gi|208779224|ref|ZP_03246570.1| exodeoxyribonuclease III [Francisella novicida FTG] gi|208745024|gb|EDZ91322.1| exodeoxyribonuclease III [Francisella novicida FTG] Length = 262 Score = 158 bits (398), Expect = 1e-36, Method: Composition-based stats. Identities = 63/268 (23%), Positives = 115/268 (42%), Gaps = 17/268 (6%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIE 58 ++ V T+N N IRA W K + D +C+QETK + + Y + Sbjct: 1 MIKVMTFNANGIRAAARKGFWEWFKTQDVDFLCMQETKAQFHQLEKDIEHFPTGYYYEFK 60 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 +K Y+G AI +K +P++++ L D D + R+I+ + I +LYLP G+ Sbjct: 61 DAVKKGYSGTAIYAKKKPLKVIKELGLDWADDEGRYIQFDYE----NFSIASLYLPSGS- 115 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF--T 176 + + K+ +++++ +++E I GD+NI+ + D N Sbjct: 116 SGDVRQEYKMKFLEKYKEILKEQVESGRDFIVCGDFNIVHKEIDIKNWKSNYGKTSGVLP 175 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 E ++G+ D R + Y++W + + N G RID+ + +P + Sbjct: 176 EEQAWLDHIFDDLGWVDTFRVINHQPLQYTWWSNRGQARANNVGWRIDYHISTPAIKDKV 235 Query: 237 H--SARIDTKPRGWTKPSDHTPVIVSLD 262 S I + SDH P+ +S D Sbjct: 236 VPESDYIYRE----NWFSDHAPLTISYD 259 >gi|88601744|ref|YP_501922.1| exodeoxyribonuclease III (xth) [Methanospirillum hungatei JF-1] gi|88187206|gb|ABD40203.1| exodeoxyribonuclease III (xth) [Methanospirillum hungatei JF-1] Length = 264 Score = 158 bits (398), Expect = 1e-36, Method: Composition-based stats. Identities = 75/273 (27%), Positives = 120/273 (43%), Gaps = 18/273 (6%) Query: 1 MSVVTVATWNVNSIRA-----RIHNLA--AWIKENNPDIICLQETKTEDKNFPFET--LQ 51 M T+ +WNVN +RA + + N DI+C+QETK + + + + Sbjct: 1 MKTYTLYSWNVNGLRAISSKEVLPGVLFPGLPAHENIDILCIQETKADAHSLKPDITRIP 60 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 ++I +K Y+GVA+ S+ +P I + D + R I A F + N+ Sbjct: 61 DYFFYINPAERKGYSGVAMYSRTEPESIELGGLSPEFDSEGRIITARFP----EFVLMNV 116 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 Y P+G K+ + FL E +IF GD N +P D P E Sbjct: 117 YFPNGGASDER-LAFKLRFYDAFLEKIKTMDAAGERIIFCGDVNTAHKPIDLARPKENEL 175 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 + F R+ ++ GF D+ R D + YS+WDY + + ++N G RID+ ++ Sbjct: 176 VSGFLPIEREWIDRVIAAGFYDSFRLFSDEGNQYSWWDYKSRARTRNVGWRIDYFFVNTA 235 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 A + A I G SDH PV ++L+ P Sbjct: 236 AKPFITGAGIRNDIMG----SDHCPVTLTLEFP 264 >gi|46581661|ref|YP_012469.1| exodeoxyribonuclease III [Desulfovibrio vulgaris str. Hildenborough] gi|46451084|gb|AAS97729.1| exodeoxyribonuclease III [Desulfovibrio vulgaris str. Hildenborough] gi|311235301|gb|ADP88155.1| exodeoxyribonuclease III [Desulfovibrio vulgaris RCH1] Length = 257 Score = 158 bits (398), Expect = 1e-36, Method: Composition-based stats. Identities = 67/264 (25%), Positives = 107/264 (40%), Gaps = 15/264 (5%) Query: 5 TVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET---C 60 + +WNVN RA W D++ LQETK + E +H Sbjct: 4 RLVSWNVNGFRAVSSKPEWNWFSTTTADVVALQETKADPAQVGEEHRSPDGWHAWWLPAT 63 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GVA+ S++ P+++ LP + + R + TF N+Y P+G Sbjct: 64 VKKGYSGVAVFSRHTPLDVAYDLPDERFRGEGRCLHLTFP----EFHFFNIYFPNGGMGE 119 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 ++ L + P++ GD+N +P D P E + F E R Sbjct: 120 ERL--RYKMGYYEAFLEHAETLRRDRPIVVCGDFNTAHRPIDLARPKENETVSGFLPEER 177 Query: 181 QSFQKLQNMGFTDAIRA-THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + G+ D R D YS+W Y + ++N G RID+ +S E + A Sbjct: 178 AWMDRFVAAGYVDTFRHVRGDEADRYSWWSYKTRARARNVGWRIDYFFVSEELRGAVRDA 237 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 I+ G SDH PV + L++ Sbjct: 238 WIEMDVMG----SDHCPVGLELEV 257 >gi|152967922|ref|YP_001363706.1| exodeoxyribonuclease III Xth [Kineococcus radiotolerans SRS30216] gi|151362439|gb|ABS05442.1| exodeoxyribonuclease III Xth [Kineococcus radiotolerans SRS30216] Length = 273 Score = 158 bits (398), Expect = 1e-36, Method: Composition-based stats. Identities = 54/263 (20%), Positives = 94/263 (35%), Gaps = 7/263 (2%) Query: 6 VATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64 VAT NVN +RA + + +W+ +PD++ LQE + D + K Sbjct: 9 VATVNVNGVRAAVRRGMHSWLDARDPDVLLLQEVRAPDAELRKALPSYPHVAHTEAAAKG 68 Query: 65 YNGVAILSKYQPIEIVTHL-PGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 GVA+ ++ + + + R+IE + + + Y+ G T + Sbjct: 69 RAGVAVATRSEFTAVRIGFAHDPHFETSGRWIEVDVDTAIGPMTLVSTYVHSGEVGTPQQ 128 Query: 124 YDDKIS---WIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 D RF + E + AGD N+ D N A F + R Sbjct: 129 EDKHRFLDAMDVRFAELGAIAAETGREALVAGDLNVGHTERDIKNWKGNRGKAGFLEDER 188 Query: 181 QSFQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 F D Y++W + ++ + G RID+ +++P + L Sbjct: 189 AHFDHWFGDLGWVDTQREVAGDVDGPYAWWSWRGQAFDNDTGWRIDYQLVTPGLGARLQG 248 Query: 239 ARIDTKPRGWTKPSDHTPVIVSL 261 D + SDH PV+ + Sbjct: 249 VETDRAASYAERFSDHAPVVATY 271 >gi|91205073|ref|YP_537428.1| exodeoxyribonuclease III [Rickettsia bellii RML369-C] gi|157827591|ref|YP_001496655.1| exodeoxyribonuclease III [Rickettsia bellii OSU 85-389] gi|91068617|gb|ABE04339.1| Exodeoxyribonuclease III [Rickettsia bellii RML369-C] gi|157802895|gb|ABV79618.1| Exodeoxyribonuclease III [Rickettsia bellii OSU 85-389] Length = 273 Score = 158 bits (398), Expect = 1e-36, Method: Composition-based stats. Identities = 79/276 (28%), Positives = 126/276 (45%), Gaps = 7/276 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62 + + TWN+NS+R RI L E+ PDII LQETK +D FP E ++++ Y H+ GQ Sbjct: 1 MKIVTWNINSLRLRIDLLKRLAYEHQPDIILLQETKVDDPLFPLEVIKNIGYEHVIYSGQ 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 KSYNGVAI+SK + + + I+ + + ++ Sbjct: 61 KSYNGVAIISKLPLQNVSSLELYNGDKRHIAATVNNIEIHNFYV---PAGGDIPDIELNS 117 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF-TLEVRQ 181 K+ K+ +I+ + + ++ +I AGD NI P PHD ++ N +E Sbjct: 118 KFKHKLEYIRLMQEWLTNNRTRDDKIIIAGDLNIAPHPHDVWSSKQLRNVISHTDIERSL 177 Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLLHSA 239 + ++ F D+ R Y++W Y W K N+G R+DHI +S L S Sbjct: 178 LVELQNSLEFIDSSRHFVPLDEKFYTWWSYRNVDWKKSNRGRRLDHIWVSNNLKDELFSI 237 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTS 275 + ++ R W PSDH P V+L + + Sbjct: 238 HLLSEARDWMPPSDHVPYFVTLRCHPVACPRDPKNN 273 >gi|307297053|ref|ZP_07576869.1| exodeoxyribonuclease III Xth [Sphingobium chlorophenolicum L-1] gi|306877579|gb|EFN08807.1| exodeoxyribonuclease III Xth [Sphingobium chlorophenolicum L-1] Length = 265 Score = 158 bits (398), Expect = 1e-36, Method: Composition-based stats. Identities = 76/268 (28%), Positives = 120/268 (44%), Gaps = 12/268 (4%) Query: 1 MS-VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIE 58 MS +++A+WN+NS+RAR+ + ++ E PDI+CLQETK ++ FP + L Y H Sbjct: 1 MSQTLSIASWNINSVRARLDIVERFLTEEAPDILCLQETKVVNEIFPTAMFRQLGYVHQV 60 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 GQ+ ++GVAI+S+ + H +RI N+Y+P G Sbjct: 61 LNGQRMHHGVAIMSR-----VPIHEDDRLDWQANGEARHVGVRLDNGVRIENVYVPAGGD 115 Query: 119 ITSTKYDDKISWIKRFLRFASQRLE--LEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 I + + K FL Q ++P I GD+NI P D ++ N T Sbjct: 116 IADREVNPKFGQKLDFLERMIQWSSGLEDKPTILTGDFNIAPMECDVWSHKQLLNVVSHT 175 Query: 177 LEVRQ--SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEAT 233 + + + N LY++W Y A W ++G R+DH+ ++ + Sbjct: 176 PIECEILARLQASNDWVDIGRHFYPAPQRLYTWWSYRAKDWAESDRGRRLDHMWMTRDVA 235 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSL 261 S R+ R W KPSDH P+I Sbjct: 236 GKAISHRVVEPARNWGKPSDHIPIITEF 263 >gi|198420194|ref|XP_002123983.1| PREDICTED: similar to APEX nuclease (multifunctional DNA repair enzyme) 1 [Ciona intestinalis] Length = 337 Score = 158 bits (398), Expect = 1e-36, Method: Composition-based stats. Identities = 74/266 (27%), Positives = 127/266 (47%), Gaps = 15/266 (5%) Query: 4 VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + +++WNV +RA + W+K +PDI LQETK +K+ P E YH+ Sbjct: 82 LKISSWNVAGVRAWVKKDGVKWVKGESPDIFTLQETKCSEKDIPQELKDLKEYHMSWNVA 141 Query: 62 --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 K ++GV + SK +P+E+ + ++ D + R T T + + Y+P+ Sbjct: 142 KSTKGFSGVGLFSKVKPLEVKFGIGVEEHDQEGR----TITAEYDKFYLVSTYVPNAQ-R 196 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + + ++ W FL + L+ ++P++ GD N+ D NP + +A F+ E Sbjct: 197 GLKRLEYRLKWNSDFLAYIKS-LDEKKPVVLCGDMNVSHHEIDLANPKGNKKNAGFSQEE 255 Query: 180 RQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R +L GFTD R + Y+FW Y + +KN G R+D+ +LS + + Sbjct: 256 RDGMTELLQSGFTDTYRDLYPDLTGQYTFWTYMGNCRAKNVGWRLDYFILSNKWKDNVCD 315 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIP 264 I+T G SDH P+ + L +P Sbjct: 316 NIIETSAMG----SDHCPITLLLAVP 337 >gi|297824099|ref|XP_002879932.1| apurinic endonuclease-redox protein [Arabidopsis lyrata subsp. lyrata] gi|297325771|gb|EFH56191.1| apurinic endonuclease-redox protein [Arabidopsis lyrata subsp. lyrata] Length = 550 Score = 158 bits (398), Expect = 1e-36, Method: Composition-based stats. Identities = 73/272 (26%), Positives = 116/272 (42%), Gaps = 21/272 (7%) Query: 4 VTVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTEDKNFPFETLQS---LNYH 56 V V TWNVN +RA + + N DI+CLQETK + K+ E +++ Y Sbjct: 288 VKVMTWNVNGLRALLKLESFSALQLAQRENFDILCLQETKLQVKDV--EEIKNTLIDGYD 345 Query: 57 IETCGQK----SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 Y+G AI+S+ +P+ + D T ++ L I Sbjct: 346 HSFWSCSVSKLGYSGTAIISRIKPLSVRYGTGLSGSDHDMEGRIVTAEFDSFYL-INTYV 404 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 G+ + +I R L + LE +P++ GD N + D +NP + + Sbjct: 405 PNSGD--GLKRLSYRIEEWDRTLSNHIKELEKSKPVVLTGDLNCAHEEIDIFNPAGNKRN 462 Query: 173 ACFTLEVRQSFQKLQ-NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 A FT+E RQSF + GF D R H Y++W Y N+G R+D+ ++S Sbjct: 463 AGFTIEERQSFGANFLDKGFVDTFRKQHPGVVGYTYWGYRHGGRKTNRGWRLDYFLVSES 522 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + +H + I G SDH P+ + L + Sbjct: 523 IAANVHDSYILPDING----SDHCPIGLILKL 550 >gi|120601181|ref|YP_965581.1| exodeoxyribonuclease III [Desulfovibrio vulgaris DP4] gi|120561410|gb|ABM27154.1| exodeoxyribonuclease III [Desulfovibrio vulgaris DP4] Length = 257 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 67/264 (25%), Positives = 107/264 (40%), Gaps = 15/264 (5%) Query: 5 TVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET---C 60 + +WNVN RA W D++ LQETK + E +H Sbjct: 4 RLVSWNVNGFRAVSSKPEWNWFSTTTADVVALQETKADPAQVGEEHRSPDGWHAWWLPAT 63 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GVA+ S++ P+++ LP + + R + TF N+Y P+G Sbjct: 64 VKKGYSGVAVFSRHTPLDVAYDLPDERFRGEGRCLHLTFP----EFHFFNIYFPNGGMGE 119 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 ++ L + P++ GD+N +P D P E + F E R Sbjct: 120 ERL--RYKMGYYEAFLEHAETLRRDRPIVVCGDFNTAHRPIDLARPKENETVSGFLPEER 177 Query: 181 QSFQKLQNMGFTDAIRA-THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + G+ D R D YS+W Y + ++N G RID+ +S E + A Sbjct: 178 AWMDRFVATGYVDTFRHVRGDEADRYSWWSYKTRARARNVGWRIDYFFVSEELRGAVRDA 237 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 I+ G SDH PV + L++ Sbjct: 238 WIEMDVMG----SDHCPVGLELEV 257 >gi|51473457|ref|YP_067214.1| exonuclease III [Rickettsia typhi str. Wilmington] gi|51459769|gb|AAU03732.1| E.coli exonuclease III [Rickettsia typhi str. Wilmington] Length = 261 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 76/262 (29%), Positives = 116/262 (44%), Gaps = 7/262 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62 + + TWN+NS+R RI L E PDII LQETK + FP E ++++ Y H+ GQ Sbjct: 1 MKIVTWNINSLRLRIELLRKLAYEYQPDIILLQETKVANSLFPLEVIKNIGYEHVIYSGQ 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 KSYNGVAI+SK + + D + + + + + Sbjct: 61 KSYNGVAIISKLPLNNVFS--LELYNDDKRHIAAIVHGLEIHNFYVPAG-GDIPDIEVNL 117 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K+ K+ +++ + + + +I GD NI P HD ++ N T R Sbjct: 118 KFKHKLEYVRLMKEWFTTNRTKNDKIIIVGDLNIAPHEHDVWSSKQMRNVISHTDIERSL 177 Query: 183 FQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLLHSA 239 +LQN Y++W Y W K N+G R+DHI +S L S Sbjct: 178 LVELQNSLGFIDSNRYFISLDKKCYTWWSYRNVDWKKSNRGRRLDHIWVSDNLKDALFSM 237 Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261 + ++ R W +PSDH P V+L Sbjct: 238 NVLSEARDWLRPSDHVPYFVTL 259 >gi|328676925|gb|AEB27795.1| Exodeoxyribonuclease III [Francisella cf. novicida Fx1] Length = 262 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 65/268 (24%), Positives = 115/268 (42%), Gaps = 17/268 (6%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIE 58 ++ V T+N N IRA W K + D +C+QETK + + Y + Sbjct: 1 MIKVMTFNANGIRAAARKGFWEWFKTQDVDFLCIQETKAQFHQLEKDEQHFPDGYYYDFK 60 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 +K Y+G AI +K +P++I+ L D D + R+I+ + I +LYLP G+ Sbjct: 61 DAVKKGYSGTAIYAKKKPLKIIKELGLDWADDEGRYIQFDYE----NFSIASLYLPSGS- 115 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF--T 176 + + K+ +++++ +++E I GD+NI+ + D N Sbjct: 116 SGDMRQEYKMQFLEKYKGILKEQVESGRDFIVCGDFNIVHKEIDIKNWKSNYGKTSGVLP 175 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 E N+G+ D R + Y++W + + N G RID+ + +P + Sbjct: 176 EEQAWLDHIFDNLGWVDTFRVINHQPLQYTWWSNRGQARANNVGWRIDYHISTPAIKDKV 235 Query: 237 H--SARIDTKPRGWTKPSDHTPVIVSLD 262 S I + SDH P+ +S D Sbjct: 236 VPESDYIYRE----NWFSDHAPLTISYD 259 >gi|227829121|ref|YP_002830900.1| exodeoxyribonuclease III Xth [Sulfolobus islandicus L.S.2.15] gi|229577921|ref|YP_002836319.1| exodeoxyribonuclease III Xth [Sulfolobus islandicus Y.G.57.14] gi|238618580|ref|YP_002913405.1| exodeoxyribonuclease III Xth [Sulfolobus islandicus M.16.4] gi|284996506|ref|YP_003418273.1| exodeoxyribonuclease III Xth [Sulfolobus islandicus L.D.8.5] gi|227455568|gb|ACP34255.1| exodeoxyribonuclease III Xth [Sulfolobus islandicus L.S.2.15] gi|228008635|gb|ACP44397.1| exodeoxyribonuclease III Xth [Sulfolobus islandicus Y.G.57.14] gi|238379649|gb|ACR40737.1| exodeoxyribonuclease III Xth [Sulfolobus islandicus M.16.4] gi|284444401|gb|ADB85903.1| exodeoxyribonuclease III Xth [Sulfolobus islandicus L.D.8.5] Length = 247 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 68/261 (26%), Positives = 111/261 (42%), Gaps = 18/261 (6%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + +WNVN IRA + NL +I+ N ++I QETK + + Y + + Sbjct: 1 MKIVSWNVNGIRAALKKNLIDFIENNMFEVIMFQETK---GDIVPLDFIMMGYEVISFPA 57 Query: 62 -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GV L+K +PI ++ L + D + R + I + G+ + Sbjct: 58 KRKGYSGVMTLTKIKPINVIKGLQIKEFDDEGRTVTLELK---DFYVINAYFPRAGDNLE 114 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K + L +P+I GD+NI Q D T + R Sbjct: 115 RLDFKLKFNNEIENFVLK---LRKAKPVILCGDFNIAHQNIDGAFSDP--TIPGLTPQER 169 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 F ++GF D R H YS+W Y + KN G+R+D+ ++S E + A Sbjct: 170 SWFSHFLSLGFIDTFRYLHPNVRKYSWWSYMGKAREKNLGLRLDYCIVSEELKDRIKMAD 229 Query: 241 IDTKPRGWTKPSDHTPVIVSL 261 I +G SDH P+I+ L Sbjct: 230 ILIDIQG----SDHAPIILEL 246 >gi|300723413|ref|YP_003712716.1| exonuclease III [Xenorhabdus nematophila ATCC 19061] gi|297629933|emb|CBJ90553.1| exonuclease III [Xenorhabdus nematophila ATCC 19061] Length = 277 Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats. Identities = 73/256 (28%), Positives = 120/256 (46%), Gaps = 8/256 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H LAA ++++ PD+I LQE K D+ FP E + L YH+ GQK Sbjct: 1 MKFVSFNINGLRARPHQLAAIVEQHRPDVIGLQEIKVHDEMFPLEEINKLGYHVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122 S+ GVA+L++ +P+++ P D D Q R I A L + N Y P G Sbjct: 61 SHYGVALLTRQKPVDVRKGFPTDGDDAQRRIIMADLETPLGLLTVINGYFPQGESRDHPV 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE------NDACFT 176 K+ K + + + E ++ GD NI P D + F Sbjct: 121 KFPAKEKFYQDLQSYLGNNHSPESNILIMGDMNISPTDSDIGIGENNQKRWLKTGKCSFL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ ++L+N GF D R + + +S++DY + + N+G+RID ++ S + Sbjct: 181 PEEREWMERLKNWGFIDTFRFQYPEANDQFSWFDYRSKGFDDNRGLRIDLLLASHWLKGV 240 Query: 236 LHSARIDTKPRGWTKP 251 I + +P Sbjct: 241 SLQVSIMSSAAWKNRP 256 >gi|88856446|ref|ZP_01131104.1| exodeoxyribonuclease III [marine actinobacterium PHSC20C1] gi|88814313|gb|EAR24177.1| exodeoxyribonuclease III [marine actinobacterium PHSC20C1] Length = 286 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 62/287 (21%), Positives = 114/287 (39%), Gaps = 25/287 (8%) Query: 1 MSV-VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 M+ + +A+ NVN +RA + W+ + DI+ LQE + D + N + Sbjct: 1 MATRLRIASVNVNGVRAAYRKGMGDWLDARDIDILALQEVRAADADIEGLLGDGWNILHD 60 Query: 59 TCGQKSYNGVAILSKY-----QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 K GVA+ S+ P+ L DD D R+++A F ++ +T+ + + Y+ Sbjct: 61 AATAKGRAGVALASRKGSAASAPVAHRVALGADDFDSAGRWLKADFDVDGKTVTVVSTYV 120 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 G + + K +K +++ L + + + GD N+ + D N A Sbjct: 121 HSG-VVDTPKQVEKYKFLEAMLVRLPELAAHSDHALIVGDLNVGHRELDIKNWRGNRKKA 179 Query: 174 CFTLEVRQSFQKLQN-----------------MGFTDAIRATHDTHHLYSFWDYYADSWS 216 F LE R F ++ + + Y++W ++ Sbjct: 180 GFLLEERAYFDRIFGANGETVECVDGTTGPGLGWVDVGRQFAGEIDGPYTWWSQRGQAFD 239 Query: 217 KNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + G RID+ + +P + + RID + SDH PV+V I Sbjct: 240 TDTGWRIDYHVATPALAASVADYRIDKAGAWDERWSDHAPVVVDYSI 286 >gi|323476236|gb|ADX81474.1| exodeoxyribonuclease III Xth [Sulfolobus islandicus HVE10/4] Length = 247 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 68/261 (26%), Positives = 111/261 (42%), Gaps = 18/261 (6%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + +WNVN IRA + NL +I+ N ++I QETK + + Y + + Sbjct: 1 MKIVSWNVNGIRAALKKNLIDFIENNMFEVIMFQETK---GDIVPLDFIMMGYEVISFPA 57 Query: 62 -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GV L+K +PI ++ L + D + R + I + G+ + Sbjct: 58 KRKGYSGVMTLTKLKPINVIKGLQIKEFDDEGRTVTLELK---DFYVINAYFPRAGDNLE 114 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K + L +P+I GD+NI Q D T + R Sbjct: 115 RLDFKLKFNNEIENFVLK---LRKAKPVILCGDFNIAHQNIDGAFSDP--TIPGLTPQER 169 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 F ++GF D R H YS+W Y + KN G+R+D+ ++S E + A Sbjct: 170 SWFSHFLSLGFIDTFRYLHPNVRKYSWWSYMGKAREKNLGLRLDYCIVSEELKDRIKMAD 229 Query: 241 IDTKPRGWTKPSDHTPVIVSL 261 I +G SDH P+I+ L Sbjct: 230 ILIDIQG----SDHAPIILEL 246 >gi|148272146|ref|YP_001221707.1| putative exonuclease III [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147830076|emb|CAN01005.1| putative exonuclease III [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 281 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 57/280 (20%), Positives = 106/280 (37%), Gaps = 19/280 (6%) Query: 2 SVVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 S + VA+ N N IRA + W+ + DI+ +QE + E + N + Sbjct: 3 SNLRVASINTNGIRAAFRKGMGDWLATRDVDILAIQEVRAETSDIEGLLGPEWNVLHDAA 62 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 K GVAI S+ + + +D D R++EA + ++ + + + Y+ G + Sbjct: 63 TAKGRAGVAIASRRRAEIHRVAIGEEDFDSAGRWLEADYDVDGTIVTVVSAYVHSGE-VG 121 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K D+K ++ R + E + GD N+ + D N A F R Sbjct: 122 TAKQDEKWRFLDGMERRLPEIAAHSELAVVVGDLNVGHRELDIRNWKGNVKRAGFLPRER 181 Query: 181 QSFQKLQN-----------------MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223 ++ + + Y++W + ++ + G RI Sbjct: 182 AYLDRILGARGEEITGVDGSTGPGLGWVDVGRQQAGEVDGPYTWWSWRGKAFDNDTGWRI 241 Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 D+ + +P + +D + SDHTPV+V I Sbjct: 242 DYQLATPALAEKVVGYAVDRAEAYDQRWSDHTPVVVDYAI 281 >gi|229366136|gb|ACQ58048.1| DNA-apurinic or apyrimidinic site lyase [Anoplopoma fimbria] Length = 310 Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats. Identities = 79/266 (29%), Positives = 139/266 (52%), Gaps = 16/266 (6%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQ----SLNYHIE 58 + + +WNV+ +RA + N W++E PD++CLQETK +K P E Y Sbjct: 55 MKITSWNVDGLRAWVKKNGLDWVREEAPDVLCLQETKCSEKALPAEITSMPEYPHKYWAA 114 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + ++ Y+GVA+L K +P+++ + ++ D + R I A F + Y+P+ + Sbjct: 115 SDEKQGYSGVAMLCKTEPLKVTYGIGKEEHDKEGRVITAEFP----NFYLVTTYVPNSS- 169 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + D + +W + F + S+ L++++PL+ GD N+ Q D NP + +A FT+E Sbjct: 170 KGLVRLDYRKTWDEDFRAYLSE-LDMQKPLVLCGDLNVAHQEIDLKNPKGNKKNAGFTVE 228 Query: 179 VRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 R+ F +L GF D+ R + + Y+FW Y +S KN G R+D+ +LS L Sbjct: 229 EREGFGQLLGSGFADSFRELYPEQANAYTFWTYMMNSRGKNVGWRLDYFLLSSSLLPGLC 288 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263 ++I +K G SDH P+ + + + Sbjct: 289 DSKIRSKALG----SDHCPITLHIAV 310 >gi|323473589|gb|ADX84195.1| exodeoxyribonuclease III Xth [Sulfolobus islandicus REY15A] Length = 247 Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats. Identities = 68/261 (26%), Positives = 111/261 (42%), Gaps = 18/261 (6%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + +WNVN IRA + NL +I+ N ++I QETK + + Y + + Sbjct: 1 MKIVSWNVNGIRAALKKNLIDFIENNMFEVIMFQETK---GDIVPLDFIMMGYEVISFPA 57 Query: 62 -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GV L+K +PI ++ L + D + R + I + G+ + Sbjct: 58 KRKGYSGVMTLTKIKPINVIKGLQIKEFDDEGRTVTLELK---DFYVINAYFPRAGDNLE 114 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K + L +P+I GD+NI Q D T + R Sbjct: 115 RLDFKLKFNNEIENFVLK---LRRAKPVILCGDFNIAHQNIDGAFSDP--TIPGLTPQER 169 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 F ++GF D R H YS+W Y + KN G+R+D+ ++S E + A Sbjct: 170 SWFSHFLSLGFIDTFRYLHPNVRKYSWWSYMGKAREKNLGLRLDYCIVSEELKDRIKMAD 229 Query: 241 IDTKPRGWTKPSDHTPVIVSL 261 I +G SDH P+I+ L Sbjct: 230 ILIDIQG----SDHAPIILEL 246 >gi|227826512|ref|YP_002828291.1| exodeoxyribonuclease III Xth [Sulfolobus islandicus M.14.25] gi|229583674|ref|YP_002842175.1| exodeoxyribonuclease III Xth [Sulfolobus islandicus M.16.27] gi|227458307|gb|ACP36993.1| exodeoxyribonuclease III Xth [Sulfolobus islandicus M.14.25] gi|228018723|gb|ACP54130.1| exodeoxyribonuclease III Xth [Sulfolobus islandicus M.16.27] Length = 247 Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats. Identities = 68/261 (26%), Positives = 111/261 (42%), Gaps = 18/261 (6%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + +WNVN IRA + NL +I+ N ++I QETK + + Y + + Sbjct: 1 MKIVSWNVNGIRAALKKNLIDFIENNMFEVIMFQETK---GDIVPLDFIMMGYEVISFPA 57 Query: 62 -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GV L+K +PI ++ L + D + R + I + G+ + Sbjct: 58 RRKGYSGVMTLTKIKPINVIKGLQIKEFDDEGRTVTLELK---DFYVINAYFPRAGDNLE 114 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K + L +P+I GD+NI Q D T + R Sbjct: 115 RLDFKLKFNNEIENFVLK---LRKAKPVILCGDFNIAHQNIDGAFSDP--TIPGLTPQER 169 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 F ++GF D R H YS+W Y + KN G+R+D+ ++S E + A Sbjct: 170 SWFSHFLSLGFIDTFRYLHPNVRKYSWWSYMGKAREKNLGLRLDYCIVSEELKDRIKMAD 229 Query: 241 IDTKPRGWTKPSDHTPVIVSL 261 I +G SDH P+I+ L Sbjct: 230 ILIDIQG----SDHAPIILEL 246 >gi|296454347|ref|YP_003661490.1| exodeoxyribonuclease III Xth [Bifidobacterium longum subsp. longum JDM301] gi|296183778|gb|ADH00660.1| exodeoxyribonuclease III Xth [Bifidobacterium longum subsp. longum JDM301] Length = 286 Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats. Identities = 62/286 (21%), Positives = 104/286 (36%), Gaps = 26/286 (9%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI---- 57 +T+ T NVN IRA + W ++ D+ C+QE + + + Sbjct: 2 TITITTSNVNGIRAAKRKGIEDWAGKHASDVWCIQEVRAPQDDVDS-IFDEFGFEYATAG 60 Query: 58 ------------ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR--FIEATFTINT 103 E C K GV +L+ + ++ LPG DV + T Sbjct: 61 KIEAPANLHAMNEVCRVKGRAGVGLLTDLEVLDKRYGLPGLSEDVDSGRWIETDVKTPEG 120 Query: 104 QTLRIGNLYLPHGNPITS----TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159 + + ++Y+ GN KY + +KR + + + GD+NI Sbjct: 121 YAITVASVYVHAGNTDDPTKMEQKYRFLDTMLKRMGALRDEAAHGGKQAVLCGDFNIAHT 180 Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSWSK 217 P D N E A F E R K + + + D Y++W ++ Sbjct: 181 PLDIKNAKANEKHAGFLPEERAYVDKWLDEYEFVDVMRSLAGDIQGPYTWWSQRGRAFDN 240 Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 N G RID+ +PE ID P + SDH P+ ++ ++ Sbjct: 241 NVGWRIDYQFATPELAETARGFVIDKAPTYDKRWSDHAPLTITYEV 286 >gi|170783171|ref|YP_001711505.1| putative nuclease [Clavibacter michiganensis subsp. sepedonicus] gi|169157741|emb|CAQ02943.1| putative nuclease [Clavibacter michiganensis subsp. sepedonicus] Length = 281 Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats. Identities = 57/280 (20%), Positives = 107/280 (38%), Gaps = 19/280 (6%) Query: 2 SVVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 S + VA+ N N IRA + W+ + DI+ +QE + E + N + Sbjct: 3 SNLRVASINTNGIRAAFRKGMGDWLDTRDVDILAIQEVRAETSDIEGLLGPEWNVLHDAA 62 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 K GVAI S+ + + +D D R++EA + ++ + + + Y+ G + Sbjct: 63 TAKGRAGVAIASRRRAEIHRVAIGAEDFDSAGRWLEADYDVDGTIVTVVSAYVHSGE-VG 121 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K D+K ++ + + E E + GD N+ + D N A F R Sbjct: 122 TAKQDEKWRFLDGMEKRLPEIAEHSELAVVVGDLNVGHRELDIRNWKGNVKRAGFLPRER 181 Query: 181 QSFQKLQN-----------------MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223 ++ + + Y++W + ++ + G RI Sbjct: 182 AYLDRILGARGEDVTGVDGSTGPGLGWVDVGRQQAGEVDGPYTWWSWRGKAFDNDTGWRI 241 Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 D+ + +P + +D + SDHTPV+V I Sbjct: 242 DYQLATPALAEKVVGYAVDRAEAYDKRWSDHTPVVVDYAI 281 >gi|326523229|dbj|BAJ88655.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 531 Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats. Identities = 68/270 (25%), Positives = 122/270 (45%), Gaps = 19/270 (7%) Query: 4 VTVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTEDKN---FPFETLQSL--N 54 + + +WNVN +RA + + + + + D++CLQETK ++K+ L+ + Sbjct: 271 LKILSWNVNGLRALVKSRGFSIHELAQREDFDVLCLQETKMQEKDVEVIKESLLEGYTNS 330 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 + + + Y+G AI+S+ +P+ I L D D + R + F + Y+P Sbjct: 331 FWTCSVSKLGYSGTAIISRVKPLSIKYGLGVPDHDTEGRIVTVEFD----DFYLLTAYVP 386 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 + + +++ L + LE +P+I GD N Q D ++P A Sbjct: 387 NSG-DGLKRLTYRVTEWDPCLGNYMKELEKSKPVILTGDLNCAHQEIDIHDPAGNSRSAG 445 Query: 175 FTLEVRQSFQKLQ-NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 FT E R+SF+ + GF D R H YS+W Y + N+G R+D+ ++S Sbjct: 446 FTKEERKSFETNFLSKGFVDTFRKQHPDVVGYSYWGYRHNCRKTNRGWRLDYFLVSESIA 505 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +H + I SDH+P+ + L + Sbjct: 506 ERIHDSYILPDV----SASDHSPLGLILKL 531 >gi|296272687|ref|YP_003655318.1| exodeoxyribonuclease III [Arcobacter nitrofigilis DSM 7299] gi|296096861|gb|ADG92811.1| exodeoxyribonuclease III [Arcobacter nitrofigilis DSM 7299] Length = 261 Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats. Identities = 65/266 (24%), Positives = 109/266 (40%), Gaps = 8/266 (3%) Query: 1 MSVVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI-E 58 M+ +WNVN IRA W+ E++ ++ +QETK+ P + +I Sbjct: 1 MNKYKFVSWNVNGIRAVDKKEALKWVDEHDIHLLGVQETKSMKTQIPETIFEKNFKNITA 60 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + L I P D+ + R E FT+ + + N+Y P+G Sbjct: 61 SESAIKGRSGTALFTDIDITFECTCPTVDVLDEGRINEVHFTLGDKDIAFFNVYFPNGQS 120 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 K+ + RFL + + +I GD N + D P E + F Sbjct: 121 KEER-LVYKMEFYDRFLDHCESLKKQGKSIIVCGDVNTAHKEIDLARPKANEGTSGFLPM 179 Query: 179 VRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 R+ K + G+ D +R D YS+W Y A++ + N G RID+ +S + + Sbjct: 180 EREWIDKFLSHGYIDTLRHVIGDEPDNYSWWSYRANARANNVGWRIDYFYVSEDLKEHIS 239 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263 +A I + G SDH P+ + ++I Sbjct: 240 NAYIMSDIMG----SDHCPIALEMEI 261 >gi|310287159|ref|YP_003938417.1| Exodeoxyribonuclease III [Bifidobacterium bifidum S17] gi|309251095|gb|ADO52843.1| Exodeoxyribonuclease III [Bifidobacterium bifidum S17] Length = 285 Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats. Identities = 63/286 (22%), Positives = 96/286 (33%), Gaps = 26/286 (9%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI---- 57 ++T+ T NVN IRA + W E+ PDI C+QE + + Sbjct: 1 MITITTSNVNGIRAAKRKGIETWAGEHAPDIWCMQEVRAPQDELNP-IFGEFGFEYATAG 59 Query: 58 ------------ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR--FIEATFTINT 103 E C K GV +L+ L G D DV + T Sbjct: 60 KIADQSELTAMNEVCRVKGRAGVGLLTDLPVTARRYGLSGLDEDVDSGRWIEADVTTPQG 119 Query: 104 QTLRIGNLYLPHGNPITS----TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159 + + +Y+ GN KY + + R + + GD+NI Sbjct: 120 YGITVACVYVHAGNSDDPVKMAQKYRFLDTMLTRMGELRDEASRGGRQAVLCGDFNIAHT 179 Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSWSK 217 P D N A F R + + + D Y++W ++ Sbjct: 180 PLDIKNAKANIKHAGFLPAERAYIDRWLGEYEFVDVIRSLAGDIQGPYTWWSQRGRAFDN 239 Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 N G RID+ +PE ID P + SDH P+ V+ D+ Sbjct: 240 NVGWRIDYQFATPELAETARGFVIDKAPSYDARWSDHAPLTVTYDV 285 >gi|193215004|ref|YP_001996203.1| exodeoxyribonuclease III Xth [Chloroherpeton thalassium ATCC 35110] gi|193088481|gb|ACF13756.1| exodeoxyribonuclease III Xth [Chloroherpeton thalassium ATCC 35110] Length = 281 Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats. Identities = 65/265 (24%), Positives = 110/265 (41%), Gaps = 10/265 (3%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFP--FETLQSLNYHIETC 60 + TV+TWN+N IRAR +L W+ N PDI+ LQE K + P F L + Sbjct: 23 IFTVSTWNINGIRARKDSLVDWLASNKPDILFLQEIKADIAKIPPVFSELPDYDAFWNDS 82 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 K + + ++ P + QT+ IG Sbjct: 83 TFKGGYSGTGILVKKSLKESLGNPIFSIPEFDAENRIVEAAFKQTVLIGIY---TPRGEK 139 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 Y+ K+ +++ A ++ ++ GD+N+ D ++ N + R Sbjct: 140 DDHYELKLQMLEQLTLRAQGLMQNGADVLICGDFNVAHTEKDVHSSQNKPNATGLRPKER 199 Query: 181 QSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + +L + G D RA + + L+++W Y+ + KN G RID +SP+ + Sbjct: 200 AAIDRLLSAGLIDITRALYPDNSELFTWWPYWKGAREKNLGWRIDCFYVSPQLATRTRKV 259 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIP 264 +DT+ K SDH+PV + LD P Sbjct: 260 EVDTE----EKSSDHSPVTLVLDFP 280 >gi|242054695|ref|XP_002456493.1| hypothetical protein SORBIDRAFT_03g037240 [Sorghum bicolor] gi|241928468|gb|EES01613.1| hypothetical protein SORBIDRAFT_03g037240 [Sorghum bicolor] Length = 511 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 65/272 (23%), Positives = 116/272 (42%), Gaps = 23/272 (8%) Query: 4 VTVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTEDKNFPFETLQS---LNYH 56 + + +WNVN ++A + + + + + D++CLQETK ++K+ E ++ Y Sbjct: 251 LKIMSWNVNGLKALLKSRGFSVQQLAQREDFDVLCLQETKMQEKDV--EVIKDTLLDGYT 308 Query: 57 IETCGQK----SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 Y+G AI+S+ +P+ I L D D + R + F + Y Sbjct: 309 NSFFTCSVSKLGYSGTAIISRVKPLSIKYGLGIPDHDTEGRVVTVEFD----DFYLLTAY 364 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 +P+ + +++ L + LE +P+I GD N Q D ++P Sbjct: 365 VPNSG-DGLKRLTYRVTEWDPSLGNYMKELEKSKPVILTGDLNCAHQEIDIHDPAGNRKS 423 Query: 173 ACF-TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 A F E + GF D R H + YS+W Y ++ NKG R+D+ ++S Sbjct: 424 AGFTNEERESFETNFLSKGFVDTFRKQHPSVVAYSYWGYRHNARKTNKGWRLDYFLVSES 483 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +H + I SDH+P+ + L + Sbjct: 484 IAEKVHDSYILPDI----SASDHSPLGLVLKL 511 >gi|187479651|ref|YP_787676.1| catabolite repression control protein [Bordetella avium 197N] gi|115424238|emb|CAJ50791.1| catabolite repression control protein [Bordetella avium 197N] Length = 260 Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats. Identities = 63/266 (23%), Positives = 116/266 (43%), Gaps = 15/266 (5%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNF--PFETLQSLNYHIET 59 ++ V + N+N IR+ W+ + N D +C+QE K ++ + + L + Sbjct: 1 MLRVISANLNGIRSANTKGFFDWLHQQNADFVCVQELKAQEADLSPAMKAPAPLQGYFHY 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GV I + ++P +V L D+D + R+IE + L + ++YLP G+ Sbjct: 61 AEKKGYSGVGIYTPHEPESVVIGLGVPDIDAEGRYIE----LVYPKLSVVSVYLPSGS-S 115 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K +++ F R + + ++ GD+NI + D N ++ F E Sbjct: 116 GDHRQTAKYRFMEHFYRHLADLIGRGREVVICGDWNIAHKEADLKNWKGNLKNSGFLPEE 175 Query: 180 RQSFQKLQNMGFTDAI---RATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 R ++ + + A T Y++W +W+KN G RID+ + S + Sbjct: 176 RAWLTQVFDELKWVDVYRRLAPDATGEGYTWWSNRGQAWAKNVGWRIDYHIASGALAATA 235 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLD 262 A I R SDH P+ + D Sbjct: 236 QQAAIYKDVR----FSDHAPLTIDYD 257 >gi|332183996|gb|AEE26250.1| Exodeoxyribonuclease III [Francisella cf. novicida 3523] Length = 262 Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats. Identities = 65/268 (24%), Positives = 115/268 (42%), Gaps = 17/268 (6%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIE 58 + V T+N N IRA W + D +C+QETK + + Y + Sbjct: 1 MTKVMTFNANGIRAAARKGFWEWFVTQDVDFLCIQETKAQFHQLEKDEQHFPDGYYYDFK 60 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 +K Y+G AI +K +P++++ L D D + R+I+ + Q I +LYLP G+ Sbjct: 61 DAVKKGYSGTAIYAKKKPLKVIKELGLDWADDEGRYIQFDY----QKFSIASLYLPSGS- 115 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF--T 176 + + K+ ++KR+ +++E I GD+NI+ + D N Sbjct: 116 SGDVRQEYKMQFLKRYKEILKEQVESGRDFIVCGDFNIVHKEIDIKNWKSNYGKTSGVLP 175 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 E ++G+ D R ++ Y++W + + N G RID+ + +P + Sbjct: 176 EEQAWLDHIFDDLGWVDTFRVINNEPLQYTWWSNRGQARANNVGWRIDYHISTPALKDKV 235 Query: 237 --HSARIDTKPRGWTKPSDHTPVIVSLD 262 S I + SDH P+ +S D Sbjct: 236 VPKSDYIYKE----NWFSDHAPLTISYD 259 >gi|170582912|ref|XP_001896345.1| exodeoxyribonuclease III family protein [Brugia malayi] gi|158596475|gb|EDP34813.1| exodeoxyribonuclease III family protein [Brugia malayi] Length = 314 Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats. Identities = 59/263 (22%), Positives = 101/263 (38%), Gaps = 10/263 (3%) Query: 4 VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNV +RA N + + E NPDII LQETK D P E + + + Sbjct: 59 IKIISWNVAGLRALIKKNGHSVLVEENPDIIALQETKCVD--VPSELQNGYHTFLNASEK 116 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 + GV +L+K +PI++ + I + Sbjct: 117 SGHGGVLLLTKEEPIKVTYSFDDKSKCDIDGNGKGRIIIAEYESYYLINAYVPNSGRGLV 176 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA--CFTLEVR 180 D K + ++L+L +P+++ GD N+ Q D NP N E Sbjct: 177 NLD-KRKIWDDYYLTFIKKLDLSKPVVYVGDLNVAHQEIDLANPKTNRNKTAGFTDQERN 235 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + L R D Y+FW ++ KN G R+D+ ++S + + Sbjct: 236 DFTRLLDAGFVDVFRRLNPDKEGAYTFWSNMHNAREKNVGWRLDYFVVSERIMNKVKKCD 295 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263 I K SDH P+ +++++ Sbjct: 296 ILHSI----KGSDHCPLSLTIEL 314 >gi|89256562|ref|YP_513924.1| exodeoxyribonuclease III [Francisella tularensis subsp. holarctica LVS] gi|115314993|ref|YP_763716.1| exodeoxyribonuclease III [Francisella tularensis subsp. holarctica OSU18] gi|156502683|ref|YP_001428748.1| exodeoxyribonuclease III [Francisella tularensis subsp. holarctica FTNF002-00] gi|167010026|ref|ZP_02274957.1| exodeoxyribonuclease III [Francisella tularensis subsp. holarctica FSC200] gi|254367881|ref|ZP_04983901.1| exodeoxyribonuclease III [Francisella tularensis subsp. holarctica 257] gi|254369453|ref|ZP_04985465.1| exodeoxyribonuclease III [Francisella tularensis subsp. holarctica FSC022] gi|290954628|ref|ZP_06559249.1| short chain dehydrogenase [Francisella tularensis subsp. holarctica URFT1] gi|295311920|ref|ZP_06802747.1| short chain dehydrogenase [Francisella tularensis subsp. holarctica URFT1] gi|89144393|emb|CAJ79683.1| Exodeoxyribonuclease III [Francisella tularensis subsp. holarctica LVS] gi|115129892|gb|ABI83079.1| exodeoxyribonuclease III [Francisella tularensis subsp. holarctica OSU18] gi|134253691|gb|EBA52785.1| exodeoxyribonuclease III [Francisella tularensis subsp. holarctica 257] gi|156253286|gb|ABU61792.1| exodeoxyribonuclease III [Francisella tularensis subsp. holarctica FTNF002-00] gi|157122403|gb|EDO66543.1| exodeoxyribonuclease III [Francisella tularensis subsp. holarctica FSC022] Length = 262 Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats. Identities = 61/268 (22%), Positives = 114/268 (42%), Gaps = 17/268 (6%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIE 58 ++ V T+N N IRA W K + D +C+QETK + + Y + Sbjct: 1 MIKVMTFNANGIRAAARKGFWEWFKTQDVDFLCMQETKAQFHQLEKDIEHFPTGYYYEFK 60 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 +K Y+G AI +K +P++++ L D D + R+I+ + I +LYLP G+ Sbjct: 61 DAVKKGYSGTAIYAKKKPLKVIKELGLDWADDEGRYIQFDYE----NFSIASLYLPSGS- 115 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF--T 176 + + K+ ++K++ +++E I GD+NI+ + D N Sbjct: 116 SGDVRQEYKMQFLKKYKEILKEQVESGRDFIVCGDFNIVHKEIDIKNWKSNYGKTSGVLP 175 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 E ++G+ D R + Y++W + + N G RID+ + + + Sbjct: 176 EEQAWLDHIFDDLGWVDTFRVINHEPLQYTWWSNRGQARANNVGWRIDYHISTSALKDKV 235 Query: 237 H--SARIDTKPRGWTKPSDHTPVIVSLD 262 S + + SDH P+ ++ D Sbjct: 236 VPESDYVYKE----NWFSDHAPLTINYD 259 >gi|56708053|ref|YP_169949.1| exodeoxyribonuclease III [Francisella tularensis subsp. tularensis SCHU S4] gi|110670524|ref|YP_667081.1| exodeoxyribonuclease III [Francisella tularensis subsp. tularensis FSC198] gi|134301867|ref|YP_001121836.1| exodeoxyribonuclease III [Francisella tularensis subsp. tularensis WY96-3418] gi|187931705|ref|YP_001891689.1| exodeoxyribonuclease III [Francisella tularensis subsp. mediasiatica FSC147] gi|224457140|ref|ZP_03665613.1| exodeoxyribonuclease III [Francisella tularensis subsp. tularensis MA00-2987] gi|254370539|ref|ZP_04986544.1| hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254874855|ref|ZP_05247565.1| xthA, exodeoxyribonuclease III [Francisella tularensis subsp. tularensis MA00-2987] gi|56604545|emb|CAG45592.1| Exodeoxyribonuclease III [Francisella tularensis subsp. tularensis SCHU S4] gi|110320857|emb|CAL08975.1| Exodeoxyribonuclease III [Francisella tularensis subsp. tularensis FSC198] gi|134049644|gb|ABO46715.1| exodeoxyribonuclease III [Francisella tularensis subsp. tularensis WY96-3418] gi|151568782|gb|EDN34436.1| hypothetical protein FTBG_00321 [Francisella tularensis subsp. tularensis FSC033] gi|187712614|gb|ACD30911.1| exodeoxyribonuclease III [Francisella tularensis subsp. mediasiatica FSC147] gi|254840854|gb|EET19290.1| xthA, exodeoxyribonuclease III [Francisella tularensis subsp. tularensis MA00-2987] Length = 262 Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats. Identities = 60/268 (22%), Positives = 114/268 (42%), Gaps = 17/268 (6%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIE 58 ++ V T+N N IRA W K + D +C+QETK + + Y + Sbjct: 1 MIKVMTFNANGIRAAARKGFWEWFKTQDVDFLCMQETKAQFHQLEKDIEHFPTGYYYEFK 60 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 +K Y+G AI +K +P++++ L D D + R+I+ + I +LYLP G+ Sbjct: 61 DAVKKGYSGTAIYAKKKPLKVIKELGLDWADDEGRYIQFDYE----NFSIASLYLPSGS- 115 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF--T 176 + + K+ +++++ +++E I GD+NI+ + D N Sbjct: 116 SGDVRQEYKMQFLEKYKEILKEQVESGRDFIVCGDFNIVHKEIDIKNWKSNYGKTSGVLP 175 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 E ++G+ D R + Y++W + + N G RID+ + + + Sbjct: 176 EEQAWLDHIFDDLGWVDTFRVINHEPLQYTWWSNRGQARANNVGWRIDYHISTSALKDKV 235 Query: 237 H--SARIDTKPRGWTKPSDHTPVIVSLD 262 S + + SDH P+ ++ D Sbjct: 236 VPESDYVYKE----NWFSDHAPLTINYD 259 >gi|241668560|ref|ZP_04756138.1| DNA-(apurinic or apyrimidinic site) lyase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254877094|ref|ZP_05249804.1| exodeoxyribonuclease III [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254843115|gb|EET21529.1| exodeoxyribonuclease III [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 262 Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats. Identities = 61/268 (22%), Positives = 113/268 (42%), Gaps = 17/268 (6%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIE 58 ++ V T+N N IRA W + D +C+QETK + + Y + Sbjct: 1 MIKVMTFNANGIRAAARKGFWEWFATQDVDFLCIQETKAQFHQLEKDEQHFPDGYYYDFK 60 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 +K Y+G AI +K +P++++ L D D + R+I+ + I +LYLP G+ Sbjct: 61 DAVKKGYSGTAIYAKKKPLKVIKELGLDWADDEGRYIQFDYE----NFSIASLYLPSGS- 115 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF--T 176 + + K+ +++++ ++ E I GD+NI+ + D N Sbjct: 116 SGDVRQEYKMQFLEKYKEILKEQTESGRDFIVCGDFNIVHKEVDIKNWKSNYGKTSGVLP 175 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 E ++G+ D R + Y++W + + N G RID+ + +P + Sbjct: 176 EEQAWLDHIFDDLGWVDTFRVINHEPLQYTWWSNRGQARANNVGWRIDYHISTPTLKDKV 235 Query: 237 H--SARIDTKPRGWTKPSDHTPVIVSLD 262 S + + SDH P+ +S D Sbjct: 236 VPESDYVYKE----NWFSDHAPLTISYD 259 >gi|325182155|emb|CCA16608.1| exodeoxyribonuclease putative [Albugo laibachii Nc14] Length = 375 Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats. Identities = 59/268 (22%), Positives = 100/268 (37%), Gaps = 13/268 (4%) Query: 4 VTVATWNVNSIRARIHN-----LAAWIKENNPDIICLQETKTEDKNFPF--ETLQSLNYH 56 + + WNVN +RA + A+++E + DIICL ETK + + L + Sbjct: 113 LKIIAWNVNGLRALLKYDESRYFHAYVREEDADIICLSETKIDSPQVEKMEDLLPKYPFQ 172 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 +C K + V D L + G Sbjct: 173 YWSCAHKKGYAGTAVCSKLEPLQVRSHLDDSTLGSTEGRFLALEFEKFWL-VHTYVPNAG 231 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC-F 175 + S E E+ +I+ GD N+ Q D ++P N + F Sbjct: 232 MKLERLGDRTTQWDAVLLQTLQSLEKESEKGVIWCGDLNVAHQDIDIHDPKNNRNKSPGF 291 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 T R +F + GF D R H +++W Y ++ ++NKG R+D+ ++S + Sbjct: 292 TDAERNNFGETLKTGFVDTFRHFHPEKQQFTYWSYRFNARTRNKGWRLDYFVVSERLMAQ 351 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + ++ + R K SDH PV L + Sbjct: 352 VKASFV----REGVKGSDHVPVGAILSL 375 >gi|260219779|emb|CBA26652.1| hypothetical protein Csp_H39670 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 263 Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats. Identities = 68/266 (25%), Positives = 109/266 (40%), Gaps = 12/266 (4%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFP--FETLQSLNYHIET 59 + + + N+N IR+ L AW+ + PD IC+QE K + + FE L H Sbjct: 1 MFKLTSLNLNGIRSATSKGLEAWLTQAQPDCICVQEVKAQAPDIAGRFEYFGELQGHFHF 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GV + +K+ P ++ + D + R++E F ++ I + Y P G+ Sbjct: 61 AEKKGYSGVGVYTKHAPSDVRIGYGSAEFDAEGRYVELRFDTPSRKFSIISAYFPSGSSG 120 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 Q+L E L+ GD NI Q D N + ++ F E Sbjct: 121 EER--QAAKFRFLAEFYPHLQQLRAERELVLCGDLNIAHQEVDLKNWKGNKKNSGFLPEE 178 Query: 180 RQSFQKL-QNMGFTDAIRATHDT--HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 R K G D R T Y++W +++KN G R+D+ + +P + Sbjct: 179 RAWMSKALSEGGLVDVYRQLEPTATDDCYTWWSNRGQAYAKNVGWRLDYHLATPALAATA 238 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLD 262 I K SDH P+ VS D Sbjct: 239 KEVAIYKA----EKFSDHAPITVSYD 260 >gi|262201711|ref|YP_003272919.1| exodeoxyribonuclease III Xth [Gordonia bronchialis DSM 43247] gi|262085058|gb|ACY21026.1| exodeoxyribonuclease III Xth [Gordonia bronchialis DSM 43247] Length = 278 Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats. Identities = 70/278 (25%), Positives = 114/278 (41%), Gaps = 18/278 (6%) Query: 1 MSVVTVATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKNFPFETLQ-- 51 MS +T++T NVN IRA + L+AW+ + PD++ LQE + + Sbjct: 1 MS-LTISTINVNGIRAAMKQRSEANRGLSAWLDDVRPDVVLLQEIRAGREQAQEALAPVL 59 Query: 52 SLNYHIETCG--QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 +H+ K + GV +LS+ +P + D+ D R++EA F L Sbjct: 60 DDGWHLVMSESVIKGHAGVGVLSRVEPSAVRVGFGSDEFDATGRYLEADFDTPLGALTAA 119 Query: 110 NLYLPHG-----NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 +LYLP G P K+D+KI ++ F + ++ GD+NI D Sbjct: 120 SLYLPKGAAQTDEPKDIAKHDEKIRFMTAFAEHLRGLVRRRRHVVVGGDWNIAHAEADIK 179 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRI 223 N F R + G+ D +R + YS+W + ++ + G RI Sbjct: 180 NWKGNRKSPGFLPHERDWVGEQLAGGWRDVVREQYPDDDGPYSWWSWRGKAFDNDAGWRI 239 Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 D+ + + A +D P + SDH PV V Sbjct: 240 DYQLTNRSLAQRAVKATVDRAPAYDLRWSDHAPVTVKF 277 >gi|254374251|ref|ZP_04989733.1| exodeoxyribonuclease III [Francisella novicida GA99-3548] gi|151571971|gb|EDN37625.1| exodeoxyribonuclease III [Francisella novicida GA99-3548] Length = 262 Score = 156 bits (393), Expect = 4e-36, Method: Composition-based stats. Identities = 64/268 (23%), Positives = 115/268 (42%), Gaps = 17/268 (6%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIE 58 ++ V T+N N IRA W K + D +C+QETK + + Y + Sbjct: 1 MIKVMTFNANGIRAAARKGFWEWFKTQDVDFLCIQETKAQFHQLEKDEQHFPDGYYYDFK 60 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 +K Y+G AI +K +P++I+ L D D + R+I+ + I +LYLP G+ Sbjct: 61 DAVKKGYSGTAIYAKKKPLKIIKELGLDWADDEGRYIQFDYE----NFSIASLYLPSGS- 115 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF--T 176 + + K+ +++++ +++E I GD+NI+ + D N Sbjct: 116 SGDMRQEYKMQFLEKYKEILKEQVESGRDFIVCGDFNIVHKEIDIKNWKSNYGKTSGVLP 175 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 E ++G+ D R + Y++W + + N G RID+ + +P + Sbjct: 176 EEQAWLDHIFDDLGWVDIFRVINHEPLQYTWWSNRGQARANNVGWRIDYHISTPTIKDKV 235 Query: 237 H--SARIDTKPRGWTKPSDHTPVIVSLD 262 S I + SDH P+ +S D Sbjct: 236 VPESDYIYRE----NWFSDHAPLTISYD 259 >gi|294339964|emb|CAZ88327.1| putative Nuclease [Thiomonas sp. 3As] Length = 267 Score = 156 bits (393), Expect = 4e-36, Method: Composition-based stats. Identities = 61/267 (22%), Positives = 109/267 (40%), Gaps = 15/267 (5%) Query: 4 VTVATWNVNSIR-ARIHNLAAWIKEN-NPDIICLQETKTEDKNFPFET--LQSL-NYHIE 58 + V T N+N +R A + W++ PD++C+QE K + + L L + Sbjct: 6 LRVTTLNLNGVRSAANKGVDDWLRSQARPDVLCVQELKALEADMTPSLRTLGGLPGAAFQ 65 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ-TLRIGNLYLPHGN 117 + Y+GV + K++P E+ + D + R++EA + + L I + Y P G+ Sbjct: 66 HAEKPGYSGVGLYWKHEPDEVRIGFGHAEFDAEGRYVEAIYKRSGGGRLSIVSAYFPSGS 125 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + L+ ++ GD NI + D N ++ F Sbjct: 126 SSEERQQA--KFRFLADFHEHLLALKAAGEVLLCGDVNIAHKEIDLKNWKGNLKNSGFLP 183 Query: 178 EVRQSFQKLQNMG-FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 E R +L + + D R + Y++W + +KN G RID+ + +P + Sbjct: 184 EERAWMTRLIDEAGYVDVFRQLDPAPNRYTWWSNRGQARAKNVGWRIDYHLATPGIAAQA 243 Query: 237 H--SARIDTKPRGWTKPSDHTPVIVSL 261 SA I T+ R SDH P+ + Sbjct: 244 KSDSAWIYTEQR----FSDHAPLTIDY 266 >gi|218189226|gb|EEC71653.1| hypothetical protein OsI_04096 [Oryza sativa Indica Group] Length = 499 Score = 156 bits (393), Expect = 4e-36, Method: Composition-based stats. Identities = 61/267 (22%), Positives = 110/267 (41%), Gaps = 13/267 (4%) Query: 4 VTVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTEDKNFP--FETLQSLNYHI 57 + + +WNVN ++A + + + + + DI+CLQETK ++K+ E L H Sbjct: 239 LKILSWNVNGLKALLKSRGFSIHQLAQREDFDILCLQETKMQEKDVEVIKEGLLEGYTHS 298 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 S G + + ++ ++ G + + G+ Sbjct: 299 FWTCSVSKLGYSGTAIISRVKPLSIKYGLGVPDHDTEGRVVTVEFNDFYLLTAYVPNSGD 358 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + +++ L + LE +P+I GD N Q D ++P A FT+ Sbjct: 359 --GLKRLTYRVTEWDPSLGNYMKDLEKSKPVILTGDLNCAHQEIDIHDPAGNRRSAGFTI 416 Query: 178 EVRQSFQKLQ-NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 E R+SF+ + GF D R H YS+W Y ++ NKG R+D+ ++S + Sbjct: 417 EERESFETNFLSKGFVDTFRKQHPNVVGYSYWGYRHNARKTNKGWRLDYFLVSESIAERV 476 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263 H + I SDH+P+ + L + Sbjct: 477 HDSYIIPDI----SASDHSPLGLVLKL 499 >gi|115440515|ref|NP_001044537.1| Os01g0801000 [Oryza sativa Japonica Group] gi|55296319|dbj|BAD68137.1| putative DNA-(apurinic or apyrimidinic site) lyase (ARP) [Oryza sativa Japonica Group] gi|55297696|dbj|BAD68286.1| putative DNA-(apurinic or apyrimidinic site) lyase (ARP) [Oryza sativa Japonica Group] gi|113534068|dbj|BAF06451.1| Os01g0801000 [Oryza sativa Japonica Group] gi|215715310|dbj|BAG95061.1| unnamed protein product [Oryza sativa Japonica Group] gi|222619408|gb|EEE55540.1| hypothetical protein OsJ_03774 [Oryza sativa Japonica Group] Length = 499 Score = 156 bits (393), Expect = 4e-36, Method: Composition-based stats. Identities = 61/267 (22%), Positives = 110/267 (41%), Gaps = 13/267 (4%) Query: 4 VTVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTEDKNFP--FETLQSLNYHI 57 + + +WNVN ++A + + + + + DI+CLQETK ++K+ E L H Sbjct: 239 LKILSWNVNGLKALLKSRGFSIHQLAQREDFDILCLQETKMQEKDVEVIKEGLLEGYTHS 298 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 S G + + ++ ++ G + + G+ Sbjct: 299 FWTCSVSKLGYSGTAIISRVKPLSIKYGLGVPDHDTEGRVVTVEFNDFYLLTAYVPNSGD 358 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + +++ L + LE +P+I GD N Q D ++P A FT+ Sbjct: 359 --GLKRLTYRVTEWDPSLGNYMKDLEKSKPVILTGDLNCAHQEIDIHDPAGNRRSAGFTI 416 Query: 178 EVRQSFQKLQ-NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 E R+SF+ + GF D R H YS+W Y ++ NKG R+D+ ++S + Sbjct: 417 EERESFETNFLSKGFVDTFRKQHPNVVGYSYWGYRHNARKTNKGWRLDYFLVSESIAERV 476 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263 H + I SDH+P+ + L + Sbjct: 477 HDSYIIPDI----SASDHSPLGLVLKL 499 >gi|94987281|ref|YP_595214.1| exonuclease III [Lawsonia intracellularis PHE/MN1-00] gi|94731530|emb|CAJ54893.1| Exonuclease III [Lawsonia intracellularis PHE/MN1-00] Length = 259 Score = 156 bits (393), Expect = 4e-36, Method: Composition-based stats. Identities = 70/267 (26%), Positives = 110/267 (41%), Gaps = 15/267 (5%) Query: 2 SVVTVATWNVNSIRARIHNL-AAWIKENNPDIICLQETKTEDKNFPFETLQSLN---YHI 57 S++ + +WN+N RA I W EN DII LQETK + + Y Sbjct: 3 SLLRLTSWNINGFRAIIKKPHWNWFHENQSDIIALQETKVDPSQLQDNLQKPEGWLSYWS 62 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 + +K Y+GVA+ SK +P+ + LP + R + + I G+ Sbjct: 63 ASIKKKGYSGVAVFSKPKPLAVTAELPNPTFQGEGRLLHLEYPSFHFM-NIYFPNGTQGD 121 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 S K ++ +P++ GD+N +P D P E + F Sbjct: 122 HRLSYKLGY-----YDSFLNYAEEARKTKPIVVCGDFNTAHRPIDLARPKANEETSGFLP 176 Query: 178 EVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 R + G+ D R H D + YS+W Y + +N G RID+ +S E + Sbjct: 177 IERTWMDRFIAAGYIDTFRYVHGDIPNNYSWWSYQQRARERNVGWRIDYFFVSIELMPTI 236 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263 A I+ +G SDH PV ++L+I Sbjct: 237 RDAWIEMDIQG----SDHCPVGLTLEI 259 >gi|308446216|ref|XP_003087123.1| hypothetical protein CRE_30356 [Caenorhabditis remanei] gi|308261295|gb|EFP05248.1| hypothetical protein CRE_30356 [Caenorhabditis remanei] Length = 297 Score = 155 bits (392), Expect = 5e-36, Method: Composition-based stats. Identities = 54/283 (19%), Positives = 105/283 (37%), Gaps = 23/283 (8%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + VA+ NVN +RA + W+ D++ +QE + +D + + C Sbjct: 14 TLRVASVNVNGVRAAFRKGMGDWLASRGVDVLAMQEVRADDSHLAELFGDEWQILHDPCN 73 Query: 62 QKSYNGVAILSKYQPIEIVTH----LPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 K GVAI S+ + + + R+IEA F + + + + + Y G Sbjct: 74 IKGRAGVAIASRVPAVAHRVGLGSAEDQERIQSSGRWIEADFEVGGELVTVISNYTHSGE 133 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + + + + K +++ Q E + GD+N+ + D N + F Sbjct: 134 -VDTPRQEAKWAFLDAMGVRLDQLAAERELVTIVGDFNVGHREFDIKNWKGNVKRSGFLP 192 Query: 178 EVRQSFQKLQ-----------------NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG 220 R F + + R + YS+W ++ + G Sbjct: 193 RERAYFDRFFGPRGETVVGVDGSEGVGHGWIDVGRRWAGEVDGPYSWWSNRGQAFDNDTG 252 Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 RID+ +++P+ + + ID + SDH PV+V + Sbjct: 253 WRIDYHVVTPQLGERVENYVIDRAASYDERWSDHAPVVVDYRV 295 >gi|4106095|gb|AAD02702.1| apurinic/apyrimidinic endonuclease [Cricetulus griseus] Length = 317 Score = 155 bits (392), Expect = 5e-36, Method: Composition-based stats. Identities = 75/270 (27%), Positives = 127/270 (47%), Gaps = 17/270 (6%) Query: 1 MSVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN----Y 55 ++ + + +WNV+ +RA I W+KE PDI+CLQETK + P E Y Sbjct: 58 LATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQDLPGLTHQY 117 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 ++ Y+GV +LS+ P+++ + ++ D + R I A F + Sbjct: 118 WSAPSDKEGYSGVGLLSRQCPLKVSYGIGEEEHDQEGRVIVAEFDSF-----VLVTAYVP 172 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + + + W K F +F L +PL+ GD N+ + D NP + +A F Sbjct: 173 NAGRGLVRLEYRQRWDKAFCKFLKD-LASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGF 231 Query: 176 TL-EVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 T E + + LQ + TD+ R + + Y+FW Y ++ +KN G R+D+ +LS Sbjct: 232 TPQERQGFGELLQAVPLTDSFRHLYPNTPYAYTFWTYMMNARAKNVGWRLDYFLLSHSLL 291 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 S L ++I +K G SDH P+ + L + Sbjct: 292 SSLCDSKIRSKALG----SDHCPITLYLAL 317 >gi|237747055|ref|ZP_04577535.1| exodeoxyribonuclease III [Oxalobacter formigenes HOxBLS] gi|229378406|gb|EEO28497.1| exodeoxyribonuclease III [Oxalobacter formigenes HOxBLS] Length = 260 Score = 155 bits (392), Expect = 6e-36, Method: Composition-based stats. Identities = 67/268 (25%), Positives = 114/268 (42%), Gaps = 15/268 (5%) Query: 3 VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS--LNYHIET 59 + ++ T N+N IR A W+ ++ +C+QE K + + + H Sbjct: 1 MFSITTANLNGIRSAVRKGFLEWMHQSGSHFVCVQEIKAQPDDIVPAIASPDLFHGHFGC 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GV I SK +P +++ + D + R+++ + + +LY P G+ Sbjct: 61 AEKKGYSGVGIYSKTKPDKVIRGFGCPEFDAEGRYLQCDYK----DFSLVSLYAPSGSSS 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K ++ F F + E E I GD+NI + D N + ++ F E Sbjct: 117 PER-QEAKFRFMDHFFPFLEKLKESEREFIICGDWNIAHKEIDLKNWKSNQKNSGFLPEE 175 Query: 180 RQS-FQKLQNMGFTDAIRATHDT--HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 R + L +G D R H Y++W +W KN G RID+ + +P Sbjct: 176 RAWLSRILDELGLIDVYRCLHPDTTDASYTWWSNRGQAWQKNVGWRIDYQIATPGIAGKA 235 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDIP 264 SA I + R SDH P+ + DIP Sbjct: 236 VSASIYKETR----FSDHAPLTIWYDIP 259 >gi|269987019|gb|EEZ93294.1| exodeoxyribonuclease III [Candidatus Parvarchaeum acidiphilum ARMAN-4] Length = 252 Score = 155 bits (392), Expect = 6e-36, Method: Composition-based stats. Identities = 67/262 (25%), Positives = 113/262 (43%), Gaps = 13/262 (4%) Query: 4 VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + +WNVN +R AR + + I D+I LQETK E+ N ET + Y + + Sbjct: 1 MKILSWNVNGLRSVARKNEIQKIINSQIYDVILLQETKIEEINKLIETNGYVYYIMHSTV 60 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+GV K PI ++ + + D + R I + + + ++ Sbjct: 61 KKGYSGVITFCKETPINVIYGIGHEKYDNEGRVITIELK---DYFIVNSYFPNSRRDLSR 117 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + + ++L +P++ GD+N+ D P + +A FT E R Sbjct: 118 LDF---KKDFNEKILEFLEKLRKRKPVVIGGDFNVAHTDLDIARPKQNDGNAGFTREERA 174 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD-SWSKNKGIRIDHIMLSPEATSLLHSAR 240 K G+ D R + YS+W Y + + N RID+ ++S E + + +A Sbjct: 175 FVDKFIEKGYIDTFRLFNKEGGNYSWWTYLYKSAKANNIAWRIDYFLVSSELKNKVKAAG 234 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I K G SDH PV V +D Sbjct: 235 IIKKQEG----SDHAPVFVEVD 252 >gi|94496587|ref|ZP_01303163.1| exonuclease III [Sphingomonas sp. SKA58] gi|94423947|gb|EAT08972.1| exonuclease III [Sphingomonas sp. SKA58] Length = 265 Score = 155 bits (391), Expect = 6e-36, Method: Composition-based stats. Identities = 76/265 (28%), Positives = 121/265 (45%), Gaps = 11/265 (4%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCG 61 +++ +WN+NS+RARI + ++E PDI+CLQETK ++ FP E + L Y H G Sbjct: 4 TLSICSWNINSVRARIDIVEQLLREETPDILCLQETKVVNETFPTEMFRRLGYVHQVLNG 63 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 Q+ ++GVAILSK + H +RI N+Y+P G + Sbjct: 64 QRMHHGVAILSK-----VPIHEDDRLDWQANGEARHVGVRLDNGVRIENVYVPAGGDVPD 118 Query: 122 TKYDDKISWIKRFLRFASQR--LELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-E 178 + K FL+ + ++P I GD+NI P D ++ + T E Sbjct: 119 RTVNPKFGQKLDFLQRMIEWSAALEDKPTILTGDFNIAPLECDVWSHRQLLDVVSHTPIE 178 Query: 179 VRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLL 236 + + + D R H LY++W Y A W + ++G R+DH+ ++ + Sbjct: 179 CEILGRLQASNDWVDIGRHFHPAPARLYTWWSYRAKDWAASDRGRRLDHMWMTRDVAEKA 238 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSL 261 R+ R W KPSDH P+I Sbjct: 239 VGHRVIEPARSWIKPSDHIPIITDF 263 >gi|262377172|ref|ZP_06070397.1| exodeoxyribonuclease III [Acinetobacter lwoffii SH145] gi|262307910|gb|EEY89048.1| exodeoxyribonuclease III [Acinetobacter lwoffii SH145] Length = 272 Score = 155 bits (391), Expect = 7e-36, Method: Composition-based stats. Identities = 60/265 (22%), Positives = 108/265 (40%), Gaps = 7/265 (2%) Query: 2 SVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIET 59 ++ V + NVN +R+ + L W+++++ D+IC+QE++ + + Y H+ Sbjct: 12 KILRVVSINVNGLRSSVTKGLLEWMEQSDADVICMQESRITHAQWTDKFKPEGWYTHLFP 71 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 + Y G AI S+ + + L + D Q RFI A F + Sbjct: 72 AERPGYAGTAIYSRLPFVSLTDGLGFELADSQGRFIAAEFDLGLDQTVQICSLYLPSGSS 131 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-E 178 K +++ + + Q + + +I GDYNI+ + D N + + E Sbjct: 132 GDEAQARKDHFLEEYAKILKQWRDENKSVIVCGDYNIVHKRIDIKNWSGNQKASGCLPHE 191 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 +G+ D R LYS+W + +KN G RID+ SP+ + Sbjct: 192 RAWLDHIYDELGYVDTFREVRKEAELYSWWSNRGQARAKNVGWRIDYHACSPDWKERTVN 251 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263 A + + SDH PVI+ + Sbjct: 252 AWVYKE----QWFSDHAPVIIDYKL 272 >gi|15604130|ref|NP_220645.1| exodeoxyribonuclease III (xthA1) [Rickettsia prowazekii str. Madrid E] gi|3860822|emb|CAA14722.1| EXODEOXYRIBONUCLEASE III (xthA1) [Rickettsia prowazekii] gi|292571858|gb|ADE29773.1| Exodeoxyribonuclease III [Rickettsia prowazekii Rp22] Length = 261 Score = 155 bits (391), Expect = 8e-36, Method: Composition-based stats. Identities = 77/263 (29%), Positives = 121/263 (46%), Gaps = 7/263 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62 + V TWN+NS+R RI L E+ PDII LQETK + FP E ++++ Y H+ GQ Sbjct: 1 MKVVTWNINSLRLRIDLLRKLAYEHQPDIILLQETKVANSLFPLEVIKNIGYEHVIYSGQ 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 KSYNGVAI+SK+ + + I I+ + + + Sbjct: 61 KSYNGVAIISKFPLNNVFALELYNGDKRHIAAIVNDLEIHNFYV---PAGGDIPDVEVNF 117 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K+ K+ +++ + + + +I GD NI P HD ++ +N T R Sbjct: 118 KFKHKLEYVRLMREWFTANRTKNDKIIIVGDLNIAPHEHDVWSSKQMQNVISHTDIERSL 177 Query: 183 FQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLLHSA 239 +LQN + Y++W Y W K N+G R+DHI +S L S Sbjct: 178 LIELQNSLGFIDSSRYFISLNKKCYTWWSYRNVDWKKSNRGRRLDHIWVSDNLKYALFSM 237 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 + ++ R W +PSDH P +V+ + Sbjct: 238 HLLSEARDWFRPSDHVPYLVTFN 260 >gi|296139981|ref|YP_003647224.1| exodeoxyribonuclease III Xth [Tsukamurella paurometabola DSM 20162] gi|296028115|gb|ADG78885.1| exodeoxyribonuclease III Xth [Tsukamurella paurometabola DSM 20162] Length = 291 Score = 154 bits (390), Expect = 9e-36, Method: Composition-based stats. Identities = 68/292 (23%), Positives = 96/292 (32%), Gaps = 32/292 (10%) Query: 4 VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 +TVAT+NVN IRA R +W+ DI+ LQE + P YH Sbjct: 1 MTVATFNVNGIRAARRRGFDSWLAGRGADIVALQELRCP----PDAVGDFAGYHAAIDCG 56 Query: 62 -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ-----TLRIGNLYLPH 115 NGVAIL++ + + R L + LYLP Sbjct: 57 SIPGRNGVAILTREPAAAVRSWAEHPPRARGLREYAHEGRYIEADLAEAPLTVACLYLPK 116 Query: 116 GNPITS------------------TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII 157 G K ++ + R + GD N+ Sbjct: 117 GGLPAHLQRPGTLRDVPDGGAKYQRKMRFLAAFARELDRNRRAAHARGREFLLLGDLNLA 176 Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA--THDTHHLYSFWDYYADSW 215 PHD N + F E R + D S+W + S+ Sbjct: 177 HLPHDVTNWRPAQKMEGFLPEERAWLDARLGPRTLVDVVRRLHGDRPGPLSWWSWAGASF 236 Query: 216 SKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPR 267 +KN G RIDH + SP + S +D + R + SDH PV+V P Sbjct: 237 TKNVGWRIDHHLASPGLAATAVSVVVDKEARADARLSDHAPVVVDYAFPAGP 288 >gi|226322793|ref|ZP_03798311.1| hypothetical protein COPCOM_00565 [Coprococcus comes ATCC 27758] gi|225208774|gb|EEG91128.1| hypothetical protein COPCOM_00565 [Coprococcus comes ATCC 27758] Length = 231 Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats. Identities = 67/242 (27%), Positives = 101/242 (41%), Gaps = 12/242 (4%) Query: 22 AAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81 + KE + DI CLQETK ++ + L + + + +K Y+G AI +K +P+ + Sbjct: 1 MDFFKEADADIFCLQETKMQEGQLVLD-LPEYHQYWNSAVKKGYSGTAIFTKKEPLSVTY 59 Query: 82 HLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQR 141 L ++ D + R I F + + ++ Sbjct: 60 GLGIEEHDQEGRVITLEFEDFYFITVYTPNSQSELARLDYRM------TWEDAFLAYLKK 113 Query: 142 LELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT 201 LE +P+IF GD N+ + D NP +A FT E R F L + GF D R + Sbjct: 114 LEETKPVIFCGDLNVAHKEIDLKNPKTNRKNAGFTDEERAKFSALLDAGFIDTYRYFYPD 173 Query: 202 -HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 +YS+W Y + KN G RID+ S S L A+I T G SDH PV + Sbjct: 174 KEGIYSWWSYRFKAREKNAGWRIDYFCTSKALESRLEDAKILTNVFG----SDHCPVELD 229 Query: 261 LD 262 Sbjct: 230 FK 231 >gi|291222020|ref|XP_002731016.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii] Length = 338 Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats. Identities = 67/259 (25%), Positives = 113/259 (43%), Gaps = 13/259 (5%) Query: 4 VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFET-LQSLNYHIETCG 61 + + +WNVN +RA N ++ + +PDI +QETK ++ P + + + Sbjct: 86 IKLVSWNVNGVRAWCKNEGHKYVSKEDPDIFTIQETKCQEGEVPDDVKFDGYHSYWSYAE 145 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y G + SK +PI + + + D + R I A + I G + Sbjct: 146 EKGYAGTGLYSKVEPISVTYGIGINKHDKEGRCITAEYEKFYF---ISTYIPNAGKGLKR 202 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 Y + R L+ ++P+I+ GD N+ Q D NP + A F+ E R+ Sbjct: 203 LSYRQEWDKDFREYMKK---LDEKKPIIWCGDLNVAHQEIDLTNPKTNKKTAGFSKEERE 259 Query: 182 SFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 F K +G D+ R + +SFW Y ++ KN G R+D+ +LS L + Sbjct: 260 GFTKHLEIGLVDSYRHLNPEKTGEWSFWTYMMNARGKNIGWRLDYFVLSKRLLPCLCDSI 319 Query: 241 IDTKPRGWTKPSDHTPVIV 259 I R SDH P+++ Sbjct: 320 I----RSQVYGSDHAPIVL 334 >gi|312381587|gb|EFR27301.1| hypothetical protein AND_06082 [Anopheles darlingi] Length = 517 Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats. Identities = 65/237 (27%), Positives = 104/237 (43%), Gaps = 9/237 (3%) Query: 5 TVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 +++WNV +R+ + +I+ PDI+CLQETK + P E YH + Sbjct: 25 KISSWNVAGLRSWVGKGGLDFIEHEQPDILCLQETKCTEDQLPDEARHIKGYHPYWLCKP 84 Query: 64 SYN-GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 GVAI S+ PI + L ++ D R + A + + +Y+P+ T Sbjct: 85 GGYAGVAIYSRKMPIHVSYGLGDEEQDQDGRLLTAEYE----KFYLVCVYVPNAGNKLVT 140 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K + L+ ++P+I GD N+ + D NP + +A FT E R Sbjct: 141 L--PKRMRWDEKFHQYLRELDSKKPVILCGDMNVAHEEIDLANPKTNKKNAGFTQEERDG 198 Query: 183 FQKLQNMGFTDAIRATHDTHH-LYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 KL + GF D R + YSFW Y + +KN G R+D+ ++S T + Sbjct: 199 LSKLLSFGFVDTFRQLYPDRKAAYSFWTYMGGARAKNVGWRLDYFIVSQRFTDKVTD 255 >gi|145534702|ref|XP_001453095.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124420795|emb|CAK85698.1| unnamed protein product [Paramecium tetraurelia] Length = 348 Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats. Identities = 60/264 (22%), Positives = 97/264 (36%), Gaps = 7/264 (2%) Query: 3 VVTVATWNVNSIRARIH--NLAAWIKENNPDIICLQETKTEDKNFPFETL-QSLNYHIET 59 V +A+WNVN IRA ++++ D+ICL E K + F E L H Sbjct: 86 TVKIASWNVNGIRAATKREQAVKYLQDTKFDVICLNELKADQAVFDKENLGAQFGKHYFL 145 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 N ++ D+ + E Sbjct: 146 YLNFCKNKGGYSGVAIASKVKPISVKCDIGISKHDQEGRTLTAEYERFYLVACYVPNAGQ 205 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + D + + + L ++P I GD N+ D NP + A FT E Sbjct: 206 KLERLDYRTKEWDVDFQNYLEDLRKKKPTILCGDLNVSHHEIDLANPAGNKKTAGFTQEE 265 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R F G+ D+ R H YS++ +S NKG R+D+ +++ E+T + + Sbjct: 266 RDQFTNYLQKGWVDSFRHLHPKEVKYSYFSARFNSKQSNKGWRLDYFIINKESTDAIIMS 325 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 I+T G SDH P+ +D+ Sbjct: 326 DINTAVEG----SDHVPIECEVDL 345 >gi|219884049|gb|ACL52399.1| unknown [Zea mays] Length = 493 Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats. Identities = 66/272 (24%), Positives = 116/272 (42%), Gaps = 23/272 (8%) Query: 4 VTVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTEDKNFPFETLQS---LNYH 56 + + +WNVN ++A + + + + + D++CLQETK ++K+ E ++ Y Sbjct: 233 LKIMSWNVNGLKALLKSRGFSVQQLAQREDFDVLCLQETKMQEKDI--EVIKDTLLDGYT 290 Query: 57 IETCGQK----SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 Y+G AI+S+ +P+ I L D D + R + F + Y Sbjct: 291 NSFWTCSVSKLGYSGTAIISRVKPLSIKYGLGISDHDTEGRVVTVEFD----DFYLLTAY 346 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 +P+ + +++ L + LE +P+I GD N Q D ++P Sbjct: 347 VPNSG-DGLKRLTYRVTEWDPSLGNYMKELEKSKPVILTGDLNCAHQEIDIHDPAGDRRS 405 Query: 173 ACF-TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 A F E + GF D R H YS+W Y ++ NKG R+D+ ++S Sbjct: 406 AGFTNEERESFGTNFLSKGFVDTFRKQHPNVVAYSYWGYRHNARKTNKGWRLDYFLVSES 465 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 T +H + I SDH+P+ + L + Sbjct: 466 ITEKVHDSYILPDI----SASDHSPLGLVLKL 493 >gi|42519716|ref|NP_965646.1| exodeoxyribonuclease A [Lactobacillus johnsonii NCC 533] gi|41584005|gb|AAS09612.1| exodeoxyribonuclease A [Lactobacillus johnsonii NCC 533] Length = 261 Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats. Identities = 63/263 (23%), Positives = 111/263 (42%), Gaps = 13/263 (4%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ +WNVN +RA + H + + DI +Q+T+ E + L + Sbjct: 7 IMKFMSWNVNGLRAALRHGFVNTFTDLDADIFGIQDTRVEPNEVKID-LPGYYQYWNYAE 65 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y G A+ +K +PI + ++D + R I F+ I G + Sbjct: 66 RKGYAGTAVFTKEKPITVANGFGVPEVDGEGRSITLEFSNFYF---INVQVPFSGEKLQR 122 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + + + R L +P+I GD ++ + D P + FT R+ Sbjct: 123 LDFRELWAQTFRNYVTK---LMQYKPVIIGGDMSVAHERIDLAEPDDNHHRPGFTGIERK 179 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD-SWSKNKGIRIDHIMLSPEATSLLHSAR 240 F +L N GF D R H Y++W Y + ++N G R+D+ ++S L +A+ Sbjct: 180 EFSELLNAGFIDTFRYFHPDEAKYTYWSYRDKEARAENLGWRLDYFLVSNNLEDRLTNAK 239 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263 I + G SDH P+ + +DI Sbjct: 240 ILSNIMG----SDHCPIELDVDI 258 >gi|306842863|ref|ZP_07475501.1| exodeoxyribonuclease III (xth) [Brucella sp. BO2] gi|306286985|gb|EFM58500.1| exodeoxyribonuclease III (xth) [Brucella sp. BO2] Length = 252 Score = 154 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 69/254 (27%), Positives = 112/254 (44%), Gaps = 9/254 (3%) Query: 18 IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKSYNGVAILSKYQP 76 + + ++++ PD++CLQETK D FP + ++L Y HI GQK Y+GVA +S+ Sbjct: 1 MPLVEQFLRDYQPDVLCLQETKCPDDQFPAKGFRALGYEHIAISGQKGYHGVATVSRRPL 60 Query: 77 IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRF-- 134 + R + A + LRI N Y+P G + K + F Sbjct: 61 GGVEK--VDFCNMGDCRHLSAVVEAGDRKLRIHNFYVPAGGDEPDPAINPKFAHKLAFLE 118 Query: 135 -LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVRQSFQKLQNMGFT 192 +R + E + GD NI P +D ++ T E G++ Sbjct: 119 EMRAIIADRKDECSSLLVGDLNIAPLENDVWSHKQLLKIVSHTPIETETLEDLRIKGGWS 178 Query: 193 DAIRATHD-THHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 D +R +Y++W Y A W ++G R+DH+ S + S + ++ RGW + Sbjct: 179 DLMRHLIAADQKIYTWWSYRAKDWDAADRGRRLDHVWGSADLESHIKGLQVLRDARGWDR 238 Query: 251 PSDHTPVIVSLDIP 264 PSDH PVI + D+ Sbjct: 239 PSDHVPVIATFDLD 252 >gi|152994652|ref|YP_001339487.1| exodeoxyribonuclease III Xth [Marinomonas sp. MWYL1] gi|150835576|gb|ABR69552.1| exodeoxyribonuclease III Xth [Marinomonas sp. MWYL1] Length = 258 Score = 154 bits (388), Expect = 1e-35, Method: Composition-based stats. Identities = 55/263 (20%), Positives = 104/263 (39%), Gaps = 7/263 (2%) Query: 4 VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + V + NVN IR A W+ +PD++CLQ+ + +++ Y+ Sbjct: 1 MKVISLNVNGIRQAAERGFFEWMVRQDPDVVCLQDIQADERTLNDSVFFPPGYNTYFFDS 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 A ++ Y + G + F + + IG PHG+ Sbjct: 61 MENPEQAGVAIYCKTMPKAIMTGMGFP-ECDFEGRFIQADFDKVSIGAFLTPHGSNHEEA 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + K +++ F + IF G N+ P D + + + ++ F E R+ Sbjct: 120 LQEHKYRFMEGFKNHLIKTRRKRREFIFCGTANVARSPIDVSSWFVNQRNSGFLPEERKW 179 Query: 183 FQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 ++ N + DA R + Y++W Y +W ++G R+D+ + +P +L+ I Sbjct: 180 INEIFNELEYIDAFRQVNKQDKQYTWWPDYERAWKLDEGGRLDYQITTPGIKNLIQGGTI 239 Query: 242 DTKPRGWTKPSDHTPVIVSLDIP 264 R SDH P+I+ +I Sbjct: 240 YKGQR----FSDHAPLIMEYNID 258 >gi|256831938|ref|YP_003160665.1| exodeoxyribonuclease III Xth [Jonesia denitrificans DSM 20603] gi|256685469|gb|ACV08362.1| exodeoxyribonuclease III Xth [Jonesia denitrificans DSM 20603] Length = 287 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 64/272 (23%), Positives = 111/272 (40%), Gaps = 5/272 (1%) Query: 2 SVVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 +++T+AT NVN +RA + AWI PDII +QE + D + + C Sbjct: 16 AMLTIATVNVNGLRAAWRKGMPAWIDAAQPDIILMQEVRAPDDIVHGFFSNGWSLVQQAC 75 Query: 61 GQKSYNGVAILSKYQPIEIVTH---LPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 K GVAI +++ I + R++EA + H Sbjct: 76 DIKGRAGVAIATRHDIIAARIGLGPQQPEIPVDTGRWVEADIALEHGRTLTVVSAYIHSG 135 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + K D+K S++ R ++ + + AGD NI +D N + A F Sbjct: 136 TAGTPKMDEKYSYLNRVTTRLAELNTPDSLALVAGDINIAHTNNDIKNWRGNKKSAGFLP 195 Query: 178 EVRQSFQKLQNMGFTDAIRA-THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 E R + + G+ D R + Y++W ++ + G RID+ + +PE + Sbjct: 196 EERAYLDQWFDAGWHDTHRDLVGEQEGPYTWWSNRGQAFDNDSGWRIDYHLTTPELFTHA 255 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268 R+D P T+ SDH P+++ + + Sbjct: 256 SYPRVDRAPSYDTRWSDHAPLVIDYSLTPASR 287 >gi|290562880|gb|ADD38834.1| DNA-apurinic or apyrimidinic site lyase [Lepeophtheirus salmonis] Length = 317 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 71/263 (26%), Positives = 117/263 (44%), Gaps = 17/263 (6%) Query: 4 VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY---HIE 58 + + +WNV +RA I L+ ++ PDI CLQETK + P E + +Y Sbjct: 61 LKITSWNVAGVRAWIKKGSLSYLLETEKPDIFCLQETKCSETKIPCELKELKDYPHQFWA 120 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 ++ Y+GVA+ SK +P+++ L D D + R I A F + G Sbjct: 121 FAKKEGYSGVALFSKVKPLDVQVGLQSQDHDEEGRIIIAEFE---FFFLLTTYVPNAGRK 177 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + + + R + + +I +GD N+ D NP + +A FT E Sbjct: 178 LVTLDKRLDWDLLLRKKMKELNKKKP---VIASGDLNVAHTEIDLANPKTNQKNAGFTPE 234 Query: 179 VRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPE-ATSLL 236 R F L ++GF D R + Y+FW Y ++ +KN G R+D+ ++S S + Sbjct: 235 ERAGFDDLLSLGFVDTYRKLNPEKTGAYTFWTYMMNARAKNVGWRLDYFLISDRWFESNV 294 Query: 237 HSARIDTKPRGWTKPSDHTPVIV 259 + I +K G SDH P+ + Sbjct: 295 CDSVIRSKVLG----SDHCPISL 313 >gi|293189928|ref|ZP_06608608.1| exodeoxyribonuclease III [Actinomyces odontolyticus F0309] gi|292821147|gb|EFF80094.1| exodeoxyribonuclease III [Actinomyces odontolyticus F0309] Length = 275 Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats. Identities = 46/275 (16%), Positives = 90/275 (32%), Gaps = 15/275 (5%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 +TV T N+N IRA W++ ++ D++ +QE + ++ E + + Sbjct: 2 TLTVTTVNLNGIRAAHKRGFLDWLEASDTDVLLMQEVRAPEE-ISREIMGEAWESVWVPC 60 Query: 62 QKSYNGVAILSKYQPIEIVTHLP--------GDDLDVQARFIEATFTINTQTLRIGNLYL 113 + ++ + ++ P D + +R+ + Y Sbjct: 61 RIKGRAGVGVAVRRGRAVLEGEPRLILDEAETDVDSGRWLEAVVRPEGGDTPVRVVSAYF 120 Query: 114 PHGNPITSTK---YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170 G T + R ++ + GD+N++ D N Sbjct: 121 HSGEKDTPKQEAKMAHLPRIGARMAELIAEEAGGGISSLVCGDFNVVRSEADIKNWKPNH 180 Query: 171 ND--ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 N E+ + ++ D YS+W + ++ N G RID+ Sbjct: 181 NKRAGVLDEEIAFLNRWVEEGWRDTVRDLAGDVQGPYSWWSWRGQAFVNNAGWRIDYQYA 240 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +P S I + SDH PV V+ +I Sbjct: 241 TPALGERARSFEIGRADEYAERFSDHAPVSVTYEI 275 >gi|289705979|ref|ZP_06502353.1| putative exodeoxyribonuclease III [Micrococcus luteus SK58] gi|289557316|gb|EFD50633.1| putative exodeoxyribonuclease III [Micrococcus luteus SK58] Length = 308 Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats. Identities = 62/270 (22%), Positives = 96/270 (35%), Gaps = 12/270 (4%) Query: 4 VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDK---NFPFETLQSLNYHIE- 58 V VAT NVN IRA + W D++ LQE + E + + Sbjct: 37 VRVATVNVNGIRASHRKGMREWFAGRGVDVLTLQEVRAPADVTAQLVREIVGEDWDEVHL 96 Query: 59 ---TCGQKSYNGVAILSKYQPIEIVTH--LPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 K GVAI S++ E+ T D R+IEA + + Sbjct: 97 ADAVAAAKGRAGVAIASRFPLGEVRTGIADADGYFDDAGRWIEADLRLPDGSPLTVVSAY 156 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 H + + K DK ++ +R S+ E + GD N+ D N A Sbjct: 157 VHSGEVDTPKQVDKYRFLDEMVRRLSELAAGEGHALVTGDLNVGHTELDIKNWKGNVKKA 216 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 F E R F + + Y++W ++ + G RID+ M + Sbjct: 217 GFLPEERAYFDRFFGELGFTDVHRALAGPVPGPYTWWSMRGKAFDNDAGWRIDYHMATAG 276 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +A +D P T+ SDH P++V Sbjct: 277 LAERATTAVVDRAPSWGTRFSDHAPLVVDY 306 >gi|329667966|gb|AEB93914.1| exodeoxyribonuclease A [Lactobacillus johnsonii DPC 6026] Length = 260 Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats. Identities = 64/263 (24%), Positives = 111/263 (42%), Gaps = 13/263 (4%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ +WNVN +RA + H + + DI +Q+T+ E + L + Sbjct: 6 IMKFMSWNVNGLRAALRHGFVNTFTDLDADIFGIQDTRVEPNEVKID-LPGYYQYWNYAE 64 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y G A+ +K +PI + ++D + R I F+ I G + Sbjct: 65 RKGYAGTAVFTKEKPITVANGFGVPEVDGEGRSITLEFSNFYF---INVQVPFSGEKLQR 121 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + + + I R L +P+I GD ++ + D P + FT R+ Sbjct: 122 LDFRELWAQIFRNYVTK---LMQYKPVIIGGDMSVAHERIDLAEPDDNHHRPGFTGIERK 178 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD-SWSKNKGIRIDHIMLSPEATSLLHSAR 240 F +L N GF D R H Y++W Y + ++N G R+D+ ++S L +A+ Sbjct: 179 EFSELLNAGFIDTFRYFHPDEAKYTYWSYRDKEARAENLGWRLDYFLVSNNLEDKLTNAK 238 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263 I G SDH P+ + +DI Sbjct: 239 ILNNIMG----SDHCPIELDVDI 257 >gi|156543084|ref|XP_001605156.1| PREDICTED: similar to ENSANGP00000020924 [Nasonia vitripennis] Length = 391 Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats. Identities = 69/258 (26%), Positives = 107/258 (41%), Gaps = 14/258 (5%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFET-LQSLNYHIETCG 61 + + TWNV+ IRA + N +++ + DII LQETK E K P E L+ + Sbjct: 140 IKICTWNVSGIRAVLKKNGMTYLEREDADIIALQETKCETKKIPDEVKLKGYTRYFLDSK 199 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 + Y G+A+ SK +PI+I L + D + + N Sbjct: 200 KAGYCGMALYSKKEPIDISMGLDEEFDDEGRLITAEYEHFYLVNVYVPNAGNKLVTLPKR 259 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + Q L+ ++P+I GD N+ Q D NP +A FT E R Sbjct: 260 L-------KWNEAFKKHIQDLDKKKPVIICGDMNVAHQEIDLKNPKTNTKNAGFTKEERD 312 Query: 182 SFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 GF D R + Y+FW Y+ ++ SKN G R+D+ ++S + + + Sbjct: 313 GMTDFLQAGFVDTFRLLYPDKTDAYTFWAYFNNARSKNIGWRLDYYIVSEKIKNKVCDVV 372 Query: 241 IDTKPRGWTKPSDHTPVI 258 R SDH PV+ Sbjct: 373 ----NRDQVFGSDHCPVV 386 >gi|154507728|ref|ZP_02043370.1| hypothetical protein ACTODO_00210 [Actinomyces odontolyticus ATCC 17982] gi|153797362|gb|EDN79782.1| hypothetical protein ACTODO_00210 [Actinomyces odontolyticus ATCC 17982] Length = 275 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 46/275 (16%), Positives = 90/275 (32%), Gaps = 15/275 (5%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 +TV T N+N IRA W++ ++ D++ +QE + ++ E + + Sbjct: 2 TLTVTTVNLNGIRAAHKRGFLDWLEASDTDVLLMQEVRAPEE-ISREIMGEAWESVWVPC 60 Query: 62 QKSYNGVAILSKYQPIEIVTHLP--------GDDLDVQARFIEATFTINTQTLRIGNLYL 113 + ++ + ++ P D + +R+ + Y Sbjct: 61 RIKGRAGIGVAVRRGRAVLEGEPRLILDEAETDVDSGRWLEAVVRPEGGDTPVRVVSAYF 120 Query: 114 PHGNPITSTK---YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170 G T + R ++ + GD+N++ D N Sbjct: 121 HSGEKDTPKQEAKMAHLPRIGARMAELIAEEAAGGISSLVCGDFNVVRSEADIKNWKPNH 180 Query: 171 ND--ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 N E+ + ++ D YS+W + ++ N G RID+ Sbjct: 181 NKRAGVLDEEIAFLNRWVEEGWRDTVRDLAGDVQGPYSWWSWRGQAFVNNAGWRIDYQYA 240 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +P S I + SDH PV V+ +I Sbjct: 241 TPALGERARSFEIGRADEYAERFSDHAPVSVTYEI 275 >gi|281414526|ref|ZP_06246268.1| exodeoxyribonuclease III [Micrococcus luteus NCTC 2665] Length = 308 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 62/270 (22%), Positives = 97/270 (35%), Gaps = 12/270 (4%) Query: 4 VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDK---NFPFETLQSLNYHIE- 58 V VAT NVN IRA + W D++ LQE + E + + Sbjct: 37 VRVATVNVNGIRASHRKGMREWFAGRGVDVLTLQEVRAPADVTAQLVSEIVGEDWDEVHL 96 Query: 59 ---TCGQKSYNGVAILSKYQPIEIVTH--LPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 K GVAI S++ E+ T D R+IEA + + Sbjct: 97 ADAVAAAKGRAGVAIASRFPLGEVRTGIADADGYFDDAGRWIEADLRLPDGSPLTVVSAY 156 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 H + + K DK ++ +R S+ E + GD N+ D N A Sbjct: 157 VHSGEVDTPKQVDKYRFLDEMVRRLSELAAGEGHALVTGDLNVGHTELDIKNWKGNVKKA 216 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 F E R F + + Y++W ++ + G RID+ M + + Sbjct: 217 GFLPEERAYFDRFFGELGFTDVHRALAGPVPGPYTWWSMRGKAFDNDAGWRIDYHMATAD 276 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +A +D P T+ SDH P++V Sbjct: 277 LAERATTAVVDRAPSWGTRFSDHAPLVVDY 306 >gi|239917012|ref|YP_002956570.1| exodeoxyribonuclease III [Micrococcus luteus NCTC 2665] gi|239838219|gb|ACS30016.1| exodeoxyribonuclease III [Micrococcus luteus NCTC 2665] Length = 308 Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats. Identities = 62/270 (22%), Positives = 97/270 (35%), Gaps = 12/270 (4%) Query: 4 VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDK---NFPFETLQSLNYHIE- 58 V VAT NVN IRA + W D++ LQE + E + + Sbjct: 37 VRVATVNVNGIRASHRKGMREWFAGRGVDVLTLQEVRAPADVTAQLVSEIVGEDWDEVHL 96 Query: 59 ---TCGQKSYNGVAILSKYQPIEIVTH--LPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 K GVAI S++ E+ T D R+IEA + + Sbjct: 97 ADAVAAAKGRAGVAIASRFPLGEVRTGIADADGYFDDAGRWIEADLRLPDGSPLTVVSAY 156 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 H + + K DK ++ +R S+ E + GD N+ D N A Sbjct: 157 VHSGEVDTPKQVDKYRFLDEMVRRLSELAAGEGHALVTGDLNVGHTELDIKNWKGNVKKA 216 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 F E R F + + Y++W ++ + G RID+ M + + Sbjct: 217 GFLPEERAYFDRFFGELGFTDVHRALAGPVPGPYTWWSMRGKAFDNDAGWRIDYHMATAD 276 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +A +D P T+ SDH P++V Sbjct: 277 LAERATTAVVDRAPSWGTRFSDHAPLVVDY 306 >gi|87120863|ref|ZP_01076755.1| exodeoxyribonuclease III [Marinomonas sp. MED121] gi|86163701|gb|EAQ64974.1| exodeoxyribonuclease III [Marinomonas sp. MED121] Length = 258 Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats. Identities = 55/263 (20%), Positives = 105/263 (39%), Gaps = 7/263 (2%) Query: 4 VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + V + NVN IR A W+ E + D++CLQ+ + E+ + Y+ Sbjct: 1 MKVISLNVNGIRQAADRGFFEWMIEQDADVVCLQDIQAEETSLNDNVFFPPGYNSYFFDS 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 + VA ++ Y + G F + + I + PHG+ Sbjct: 61 LTNPDVAGVAIYSKKMPKAIMTGIGFS-DGDFEGRFIQADFDKVSIASFLTPHGSNHEQE 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 D K ++++ F + IF G N+ P D + + + ++ F E RQ Sbjct: 120 LQDQKYAFMEGFKNHLIKTRRKRREFIFCGTANVARSPIDVSSWFVNQRNSGFLPEERQW 179 Query: 183 FQKLQN-MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 ++ N + DA R + Y++W Y +W ++G R+D+ + +P ++ + + Sbjct: 180 INEIFNEHEYIDAFRQINKQDKQYTWWPDYERAWKLDEGGRLDYQIATPGLKQVIRAGSV 239 Query: 242 DTKPRGWTKPSDHTPVIVSLDIP 264 R DH P+I+ D+ Sbjct: 240 YKDQRFA----DHAPLIMEYDLD 258 >gi|78186003|ref|YP_374046.1| AP endonuclease [Chlorobium luteolum DSM 273] gi|78165905|gb|ABB23003.1| AP endonuclease, family 1 [Chlorobium luteolum DSM 273] Length = 267 Score = 153 bits (385), Expect = 4e-35, Method: Composition-based stats. Identities = 61/275 (22%), Positives = 109/275 (39%), Gaps = 9/275 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + VA+WNVN IRAR L +W+++++PD++ LQE K + P + Y Sbjct: 1 MIVASWNVNGIRAREGALESWVRQSSPDVLILQEVKASVEEIPLSIMSLDGYRSFWNDSS 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 G + + E T ++T L I Y+P G+ Sbjct: 61 IRKGYSG-TGILMKETPALEGATFEIPPFDIENRTVVLHTGELSIIGTYVPRGDSAQHYV 119 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 K+ +++ + + L ++ GD N+ + D + E R + Sbjct: 120 L--KLGYLEAMHEYVRELLACGRQILVTGDMNVAHRQVDLHRSENRPGATGIRPEERSAI 177 Query: 184 QKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 +L +G +D +R + L+++W Y+ + +N G RID LS + A +D Sbjct: 178 DRLIALGLSDVMRELNPERDDLFTWWPYWRMARERNIGWRIDCFYLSGYRKDRILRAAVD 237 Query: 243 TKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQN 277 K SDH P+I+ +PE + + Sbjct: 238 M----PEKSSDHAPIILEF-VPESGLHEDTRSFSR 267 >gi|255578467|ref|XP_002530098.1| ap endonuclease, putative [Ricinus communis] gi|223530409|gb|EEF32297.1| ap endonuclease, putative [Ricinus communis] Length = 486 Score = 153 bits (385), Expect = 4e-35, Method: Composition-based stats. Identities = 75/269 (27%), Positives = 117/269 (43%), Gaps = 28/269 (10%) Query: 4 VTVATWNVNSIRARIH--NL--AAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 V + +WNVN +RA + + N D++C QETK + K Y Sbjct: 237 VKLMSWNVNGLRALLKLEGFSAVELAQRENFDVLCFQETKLQAK----------GYENSF 286 Query: 60 CGQKS----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 Y+G AI+S+ +P+ + L D D + R + A F + + N Y+P+ Sbjct: 287 WTCSHSKLGYSGTAIVSRVKPLSVSYGLGIADHDSEGRLVTAEFD----SFYLLNAYVPN 342 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + ++S L + LE +P+I GD N Q D YNP +A F Sbjct: 343 SG-DGLKRLSYRVSQWDLSLSNYMKELEKSKPVILNGDLNCAHQEIDIYNPAGNRRNAGF 401 Query: 176 TLEVRQSFQKLQ-NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 T E RQSF+ + GF D+ R H Y++W Y NKG R+D+ ++S + Sbjct: 402 TDEERQSFETNFLSRGFVDSFRKQHPDVVGYTYWGYRHGGRKTNKGWRLDYFLVSESISD 461 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +H + I G SDH P+ + L + Sbjct: 462 QVHDSYIVPDVTG----SDHCPIGLVLKV 486 >gi|86156859|ref|YP_463644.1| exodeoxyribonuclease III [Anaeromyxobacter dehalogenans 2CP-C] gi|85773370|gb|ABC80207.1| exodeoxyribonuclease III [Anaeromyxobacter dehalogenans 2CP-C] Length = 262 Score = 152 bits (384), Expect = 5e-35, Method: Composition-based stats. Identities = 63/266 (23%), Positives = 103/266 (38%), Gaps = 15/266 (5%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + TWNVN IRAR + +I PD++CLQE K P + Y G+ Sbjct: 1 MKIGTWNVNGIRAREAQVGEFIAREGPDVVCLQEIKAPPSKVPPSLCELEGYWCLWHGET 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +Y+GVA+L + D++ R + + ++Y+P+G + K Sbjct: 61 AYSGVALLVRKAIAPERPAFVHPPFDLETRVATCELGG----VTVASIYVPNGGKDLAAK 116 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 RFA+ PL+ GD N+ D + E R F Sbjct: 117 LRFLE----AMERFAADAQASGRPLVLCGDLNVARTDMDVHPKERKAGAIGQLPEERALF 172 Query: 184 QKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 +++ G D RA L+++W + + +N G RID+++ S + R+ Sbjct: 173 ERILAHGLVDVGRALDPANEGLFTWWAPWRNLRQRNIGWRIDYVLASAPLAASATRCRVL 232 Query: 243 TKPRGWTKPSDHTPVIVSLDIPEPRK 268 SDH PV+ P P Sbjct: 233 AD----FGTSDHAPVVAEF--PAPSP 252 >gi|193211783|ref|YP_001997736.1| exodeoxyribonuclease III [Chlorobaculum parvum NCIB 8327] gi|193085260|gb|ACF10536.1| exodeoxyribonuclease III [Chlorobaculum parvum NCIB 8327] Length = 253 Score = 152 bits (383), Expect = 6e-35, Method: Composition-based stats. Identities = 60/259 (23%), Positives = 101/259 (38%), Gaps = 9/259 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + TWN+N IRAR LAAW+ PD + L+E K ++ P Y G Sbjct: 1 MNIYTWNINGIRARQEALAAWLDSRKPDFVVLEEVKAREEEIPETITDFAGYRKFWNGSS 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 G + + E + + + T ++ + Y+P GN + Sbjct: 61 FKKGYSGVGLLVREESLGDVSCEVPPF--DVENRTLVLHAPQFTLIGTYVPRGN--GAEH 116 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ ++ + + + + +I AGD N+ D + E R + Sbjct: 117 YAVKLRYLADLKEYIASLIAEGQEVILAGDMNVALTEIDVHRSQNKPGATGLRPEERSAI 176 Query: 184 QKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 + +G D +R + L+++W + + +N G RID I LSP + +D Sbjct: 177 EAHLELGLHDIVRELNPDKKDLFTWWPNWKFARERNLGWRIDCIYLSPALAGKVSGVSVD 236 Query: 243 TKPRGWTKPSDHTPVIVSL 261 K SDH PV V L Sbjct: 237 LD----EKSSDHAPVSVEL 251 >gi|162147600|ref|YP_001602061.1| putative exodeoxyribonuclease III protein [Gluconacetobacter diazotrophicus PAl 5] gi|209542233|ref|YP_002274462.1| exodeoxyribonuclease III Xth [Gluconacetobacter diazotrophicus PAl 5] gi|161786177|emb|CAP55759.1| putative exodeoxyribonuclease III protein [Gluconacetobacter diazotrophicus PAl 5] gi|209529910|gb|ACI49847.1| exodeoxyribonuclease III Xth [Gluconacetobacter diazotrophicus PAl 5] Length = 270 Score = 152 bits (383), Expect = 6e-35, Method: Composition-based stats. Identities = 81/263 (30%), Positives = 118/263 (44%), Gaps = 6/263 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62 + + TWN+NS+R R+ LA E PDIICLQETK D FP + ++ L Y HI+ G Sbjct: 8 MRIVTWNINSLRLRLPLLARLGAELRPDIICLQETKVPDDLFPADAIRDLGYVHIQHRGM 67 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 KSYNGVAILS+ + P R I A+F + + + + N Y+P G I Sbjct: 68 KSYNGVAILSRVPLTPLD-DTPDWCARSDCRHIAASFPMGGRPVELHNFYVPAGGDIPDP 126 Query: 123 KYDDKISWIKRFLRFASQRL--ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF-TLEV 179 + K + F+ A+ I GD NI P D ++ N EV Sbjct: 127 DANPKFAHKLAFVDEATSWFTGRTSHRTILVGDLNIAPLEQDVWSHKQLLNVVSHTPPEV 186 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLLHS 238 + LY++W Y W + N+G R+DH+ ++P+ T+ L Sbjct: 187 TRLMAWQACGFVDAMRHFVPPDEKLYTWWSYRNRDWKASNRGRRLDHVWITPDLTAALKD 246 Query: 239 ARIDTKPRGWTKPSDHTPVIVSL 261 + + R W SDH PV + Sbjct: 247 MTVLREARDWPTTSDHVPVAMDF 269 >gi|168036056|ref|XP_001770524.1| predicted protein [Physcomitrella patens subsp. patens] gi|162678232|gb|EDQ64693.1| predicted protein [Physcomitrella patens subsp. patens] Length = 363 Score = 152 bits (383), Expect = 7e-35, Method: Composition-based stats. Identities = 73/278 (26%), Positives = 114/278 (41%), Gaps = 25/278 (8%) Query: 2 SVVTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKN---FPFE 48 VV + +WNVN +RA + +A + D++CLQETK ++K+ Sbjct: 95 KVVKLLSWNVNGLRALLKEKGAEHEQGSMIARLAAREDFDVLCLQETKLQEKDVADIRKS 154 Query: 49 TLQSLNYHIETCGQKS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 L S + C Y+G AI+S+ +PI + L + D + R I F + Sbjct: 155 LLASHEVSLWGCSTSKLGYSGTAIISRIKPISVQYGLGIPNHDQEGRLITCEFDTFYFVV 214 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 + L + LE ++P+I GD N + D +P Sbjct: 215 SYVPNSGAKLER-----LAYRTQEWDVALSSHLRELEKKKPVILTGDLNCAHEDIDINDP 269 Query: 167 IIWENDACFTLEVRQSFQKLQ-NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225 A FT E R+SF+ + GF D R H Y++W Y S KNKG R+D+ Sbjct: 270 AGNRKSAGFTDEERESFKTNFLDHGFVDTFRKQHPNAVAYTYWGYRTASRPKNKGWRLDY 329 Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 ++S + +H + G SDH P+ + L I Sbjct: 330 FLVSGSLSENVHDSYTIPDVGG----SDHCPIALILKI 363 >gi|312067871|ref|XP_003136947.1| exodeoxyribonuclease III family protein [Loa loa] gi|307767891|gb|EFO27125.1| exodeoxyribonuclease III family protein [Loa loa] Length = 306 Score = 152 bits (383), Expect = 7e-35, Method: Composition-based stats. Identities = 63/263 (23%), Positives = 111/263 (42%), Gaps = 10/263 (3%) Query: 4 VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNV +RA I + + + NPDI+ LQETK + P E + T + Sbjct: 51 IKIISWNVAGLRAWIKKDGHSILVKENPDIVALQETKCVE--VPNELQNGYYSFLNTSEK 108 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 + GV +L+K +PI++ + I + Sbjct: 109 SGHGGVLLLTKEEPIKVTYTFDDKSKSGLDGNGKGRIIIAEYENYYLINAYVPNSGRGLV 168 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND-ACFTLEVRQ 181 D K + ++L+L +P+++ GD N+ Q D NP N A FT + R Sbjct: 169 NLD-KRKFWDDCYFSFIKKLDLNKPIVYVGDLNVAHQEIDLANPKTNYNKTAGFTDQERN 227 Query: 182 SFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 F +L + GF D R + +Y+FW ++ KN G R+D+ ++S + + Sbjct: 228 DFTRLLDAGFVDVFRRLNPEKEGVYTFWSNMRNAREKNVGWRLDYFVVSERIMNKVKECD 287 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263 I K SDH P+ +++++ Sbjct: 288 ILCSV----KGSDHCPLSLTIEL 306 >gi|171742567|ref|ZP_02918374.1| hypothetical protein BIFDEN_01680 [Bifidobacterium dentium ATCC 27678] gi|306822478|ref|ZP_07455856.1| exodeoxyribonuclease III [Bifidobacterium dentium ATCC 27679] gi|309801420|ref|ZP_07695547.1| putative exodeoxyribonuclease III [Bifidobacterium dentium JCVIHMP022] gi|171278181|gb|EDT45842.1| hypothetical protein BIFDEN_01680 [Bifidobacterium dentium ATCC 27678] gi|304554023|gb|EFM41932.1| exodeoxyribonuclease III [Bifidobacterium dentium ATCC 27679] gi|308221935|gb|EFO78220.1| putative exodeoxyribonuclease III [Bifidobacterium dentium JCVIHMP022] Length = 286 Score = 152 bits (383), Expect = 7e-35, Method: Composition-based stats. Identities = 68/286 (23%), Positives = 100/286 (34%), Gaps = 26/286 (9%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI---- 57 +++ T NVN IRA + W N PDI C+QE + + Sbjct: 2 TISITTSNVNGIRAAKRKGIEIWAGRNTPDIWCMQEVRAPQHEIDP-IFDEFGFEYSTAG 60 Query: 58 ------------ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR--FIEATFTINT 103 E C K GV +LS I+ LPG D DV + T Sbjct: 61 KIADQSELDRLNEVCRIKGRAGVGLLSALPVIDKRYGLPGLDDDVDSGRWIEADVKTPQG 120 Query: 104 QTLRIGNLYLPHGNPITS----TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159 + + +Y+ GN KY + ++R + + + GD+NI Sbjct: 121 YIVTVVCVYVHAGNTDDPAKMEQKYRFLDTMLERMGQLRDEAAHGGRQSVLCGDFNIAHT 180 Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSWSK 217 P D N E A F E R K + D Y++W ++ Sbjct: 181 PLDIKNAKANETHAGFLPEERAYVDKWLGELEFVDVMRNLAGDIQGPYTWWSQRGRAFDN 240 Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 N G RID+ +PE ID P + SDH P+ ++ DI Sbjct: 241 NVGWRIDYQFATPELAESACGFVIDKAPTYDKRWSDHAPLTITYDI 286 >gi|119026076|ref|YP_909921.1| exodeoxyribonuclease [Bifidobacterium adolescentis ATCC 15703] gi|154488848|ref|ZP_02029697.1| hypothetical protein BIFADO_02156 [Bifidobacterium adolescentis L2-32] gi|118765660|dbj|BAF39839.1| possible exodeoxyribonuclease [Bifidobacterium adolescentis ATCC 15703] gi|154082985|gb|EDN82030.1| hypothetical protein BIFADO_02156 [Bifidobacterium adolescentis L2-32] Length = 286 Score = 151 bits (382), Expect = 7e-35, Method: Composition-based stats. Identities = 62/286 (21%), Positives = 94/286 (32%), Gaps = 26/286 (9%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI---- 57 +T+ T NVN IRA + W +N PD+ C+QE + + Sbjct: 2 TITITTSNVNGIRAAKRKGIEQWAAKNTPDVWCMQEVRAPQNEIDP-IFDEFGFEYATAG 60 Query: 58 ------------ETCGQKSYNGVAILSKYQPIEIVTHLPG------DDLDVQARFIEATF 99 E C K GV +LS I+ LPG ++A Sbjct: 61 RIADQSGLDRMNEICRIKGRAGVGLLSALPVIDKRYGLPGLAEDVDSGRWIEADVKTPQG 120 Query: 100 TINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159 T + KY + + R + + + + GD+NI Sbjct: 121 YTVTVVCVYVHAGNTDDPEKMKQKYRFLDTMLVRMGQLRDEAAHGGKQAVLCGDFNIAHT 180 Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA--THDTHHLYSFWDYYADSWSK 217 P D N E A F E R K + D Y++W ++ Sbjct: 181 PLDIKNAKANEKHAGFLPEERAYVDKWLGELEFVDVMRSLCGDIQGPYTWWSQRGRAFDN 240 Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 N G RID+ +PE ID P + SDH P+ ++ D+ Sbjct: 241 NVGWRIDYQFATPELAETARGFVIDKAPTYDLRWSDHAPLSITYDV 286 >gi|293115606|ref|ZP_05792271.2| exodeoxyribonuclease III [Butyrivibrio crossotus DSM 2876] gi|292809044|gb|EFF68249.1| exodeoxyribonuclease III [Butyrivibrio crossotus DSM 2876] Length = 237 Score = 151 bits (382), Expect = 8e-35, Method: Composition-based stats. Identities = 64/246 (26%), Positives = 96/246 (39%), Gaps = 12/246 (4%) Query: 19 HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIE 78 + + DI CLQE K + + +Y +K Y+G A+ SK +P+ Sbjct: 3 KGFMDFFDSVDADIFCLQEIKLSEGQIEWNKENYYSY-WNYAEKKGYSGTAVFSKEKPLS 61 Query: 79 IVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFA 138 + + D+ D + R I F + + R Sbjct: 62 VKYGIGIDEHDHEGRVITLEFENFYMVTVYTPNSQRELTRLEYRM------KWEDDFRNF 115 Query: 139 SQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT 198 L +P++ GD N+ + D NP +A FT E RQ +L + GF D R Sbjct: 116 LNDLRKTKPVVVTGDMNVAHKEIDLKNPKTNRKNAGFTDEERQKMTELLDSGFIDTFRYF 175 Query: 199 HDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257 + YS+W Y S KN G RID+ + S E L SA I K G SDH P+ Sbjct: 176 YPDVEQKYSWWSYMFKSREKNAGWRIDYFLASKELEDRLISAEIHDKVLG----SDHCPI 231 Query: 258 IVSLDI 263 + +D+ Sbjct: 232 ELVIDL 237 >gi|15805383|ref|NP_294077.1| exodeoxyribonuclease III [Deinococcus radiodurans R1] gi|6458033|gb|AAF09936.1|AE001896_1 exodeoxyribonuclease III [Deinococcus radiodurans R1] Length = 283 Score = 151 bits (382), Expect = 8e-35, Method: Composition-based stats. Identities = 70/262 (26%), Positives = 118/262 (45%), Gaps = 18/262 (6%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + V T+NVN +R+ + LA W++ N PD++ LQE + E + L + + Sbjct: 35 LKVTTFNVNGLRSALRKGLADWVESNQPDVLLLQEVRAEPM---PDALPGYHSAWFPAQK 91 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 Y+GVAILS+ ++ +P D++D + R + A +R ++YLP G+ Sbjct: 92 AGYSGVAILSRLPLKDVRLGMPHDEMDAEGRVVSAVVAG----VRFVSVYLPSGS-SGEA 146 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + K + + + S+ L EP++ GDYNI + D N + ++ F R Sbjct: 147 RQGFKDRVLADYQAWVSELLAAGEPVVIGGDYNIAHREIDLKNWRSNQKNSGFLPHERTW 206 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 G D R Y++W A++++ N G RID+ +LS + R D Sbjct: 207 MTAHLAAGLVDCHRDCLGEEAEYTWWSNRANAYANNVGWRIDY-LLSAGV--RVSGVRSD 263 Query: 243 TKPRGWTKPSDHTPV--IVSLD 262 R SDH P+ V L+ Sbjct: 264 RSVR----LSDHAPLTGWVELE 281 >gi|212715599|ref|ZP_03323727.1| hypothetical protein BIFCAT_00498 [Bifidobacterium catenulatum DSM 16992] gi|212660966|gb|EEB21541.1| hypothetical protein BIFCAT_00498 [Bifidobacterium catenulatum DSM 16992] Length = 286 Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats. Identities = 67/286 (23%), Positives = 100/286 (34%), Gaps = 26/286 (9%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI---- 57 +T+ T NVN IRA + W +N PD+ C+QE + + Sbjct: 2 TITITTSNVNGIRAAKRKGIEQWAAKNTPDVWCMQEVRAPQNEIDP-IFDEFGFEYATAG 60 Query: 58 ------------ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR--FIEATFTINT 103 E C K GV +LS +E LPG + DV + T Sbjct: 61 RVDDQSELNRMNEICRIKGRAGVGLLSTLPVVEKRYGLPGLEEDVDSGRWIEADVQTPQG 120 Query: 104 QTLRIGNLYLPHGNPITS----TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159 + + +Y+ GN KY + + R + + + + GD+NI Sbjct: 121 YVITVTCVYVHAGNTDDPEKMKQKYRFLDTMLARMEQLRDEAAHGGKQAVLCGDFNIAHT 180 Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSWSK 217 P D N E A F E R K + D Y++W ++ Sbjct: 181 PLDIKNAKANETHAGFLPEERAYVDKWLGELEFVDVMRDLAGDIQGPYTWWSQRGRAFDN 240 Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 N G RID+ +PE ID P + SDH P+ + DI Sbjct: 241 NVGWRIDYQFATPELAETACGFVIDKAPTYDLRWSDHAPLSIMYDI 286 >gi|170665740|gb|ACB29409.1| apurinic endonuclease-redox protein [Arabidopsis thaliana] Length = 538 Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats. Identities = 73/272 (26%), Positives = 113/272 (41%), Gaps = 21/272 (7%) Query: 4 VTVATWNVNSIRARIH----NLAAWIKENNPDIICLQETKTEDKNFPFETLQS---LNYH 56 V V TWNVN +R + + + N DI+CLQETK + K+ E ++ Y Sbjct: 276 VKVMTWNVNGLRGLLKFESFSALQLAQRENFDILCLQETKLQVKDV--EEIKKTLIDGYD 333 Query: 57 IETCGQK----SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 Y+G AI+S+ +P+ + D T ++ L I Sbjct: 334 HSFWSCSVSKLGYSGTAIISRIKPLSVRYGTGLSGSDHDTEGRIVTAEFDSFYL-INTYV 392 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 G+ + +I R L + LE +P++ GD N + D +NP + Sbjct: 393 PNSGD--GLKRLSYRIEEWDRTLSNHIKELEKSKPVVLTGDLNCAHEEIDIFNPAGNKRS 450 Query: 173 ACFTLEVRQSFQKLQ-NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 A FT E RQSF + GF D R H Y++W Y NKG R+D+ ++S Sbjct: 451 AGFTEEERQSFGANFLDKGFVDTFRKQHPGVVGYTYWGYRHGGRKTNKGWRLDYFLVSQS 510 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + +H + I G SDH P+ + L + Sbjct: 511 IAANVHDSYILPDING----SDHCPIGLILKL 538 >gi|146283435|ref|YP_001173588.1| exodeoxyribonuclease III [Pseudomonas stutzeri A1501] gi|145571640|gb|ABP80746.1| exodeoxyribonuclease III [Pseudomonas stutzeri A1501] Length = 232 Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats. Identities = 95/230 (41%), Positives = 137/230 (59%), Gaps = 5/230 (2%) Query: 33 ICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKY-QPIEIVTHLPGDDLDVQ 91 +CLQE K +D +FP + ++ Y GQKS+NGVAIL++ +P+EI LPGD D Sbjct: 2 VCLQELKAQDADFPIDDIRGAGYGAIWHGQKSWNGVAILARDSEPLEIRRGLPGDPDDSH 61 Query: 92 ARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFA 151 +R++EA + + +LYLP+GNP K+D K++W +R + A+ L P++ A Sbjct: 62 SRYLEAAV----HGVIVASLYLPNGNPQPGPKFDYKLAWFERLIEHAAGLLASGHPVVLA 117 Query: 152 GDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYY 211 GDYN++P D YNP W DA E R +++L G+TDA+RA +Y+FWDY+ Sbjct: 118 GDYNVVPTDEDIYNPRSWRKDALLQPESRACYERLLAQGWTDALRAQFPDEPVYTFWDYF 177 Query: 212 ADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 W KN G+RIDH++LSP+ L +A +D RG SDH P VSL Sbjct: 178 RQHWQKNSGLRIDHLLLSPDLAPCLQTAGVDRWVRGQEHASDHAPTWVSL 227 >gi|472869|emb|CAA54234.1| ARP protein [Arabidopsis thaliana] Length = 527 Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats. Identities = 74/272 (27%), Positives = 118/272 (43%), Gaps = 23/272 (8%) Query: 4 VTVATWNVNSIRARIH----NLAAWIKENNPDIICLQETKTEDKNFPFETLQS---LNYH 56 V V TWNVN +R + + + N DI+CLQETK + K+ E ++ Y Sbjct: 267 VKVMTWNVNGLRGLLKFESFSALQLAQRENFDILCLQETKLQVKDV--EEIKKTLIDGYD 324 Query: 57 IETCGQK----SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 Y+G AI+S+ +P+ + D + R + A F + + N Y Sbjct: 325 HSFWSCSVSKLGYSGTAIISRIKPLSVRYGTGLSGHDTEGRIVTAEFD----SFYLINTY 380 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 +P+ + +I R L + LE +P++ GD N + D +NP + Sbjct: 381 VPNSG-DGLKRLSYRIEEWDRTLSNHIKELEKSKPVVLTGDLNCAHEEIDIFNPAGNKRS 439 Query: 173 ACFTLEVRQ-SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 A FT+E RQ L + GF D R H Y++W Y NKG R+D+ ++S Sbjct: 440 AGFTIEERQSFGANLLDKGFVDTFRKQHPGVVGYTYWGYRHGGRKTNKGWRLDYFLVSQS 499 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + +H + I G SDH P+ + L + Sbjct: 500 IAANVHDSYILPDING----SDHCPIGLILKL 527 >gi|15227354|ref|NP_181677.1| ARP; DNA-(apurinic or apyrimidinic site) lyase [Arabidopsis thaliana] gi|8488963|sp|P45951|ARP_ARATH RecName: Full=Apurinic endonuclease-redox protein; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase gi|3241944|gb|AAC23731.1| DNA-(apurinic or apyrimidinic site) lyase (ARP) [Arabidopsis thaliana] gi|330254890|gb|AEC09984.1| apurinic endonuclease-redox protein [Arabidopsis thaliana] Length = 536 Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats. Identities = 74/272 (27%), Positives = 118/272 (43%), Gaps = 23/272 (8%) Query: 4 VTVATWNVNSIRARIH----NLAAWIKENNPDIICLQETKTEDKNFPFETLQS---LNYH 56 V V TWNVN +R + + + N DI+CLQETK + K+ E ++ Y Sbjct: 276 VKVMTWNVNGLRGLLKFESFSALQLAQRENFDILCLQETKLQVKDV--EEIKKTLIDGYD 333 Query: 57 IETCGQK----SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 Y+G AI+S+ +P+ + D + R + A F + + N Y Sbjct: 334 HSFWSCSVSKLGYSGTAIISRIKPLSVRYGTGLSGHDTEGRIVTAEFD----SFYLINTY 389 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 +P+ + +I R L + LE +P++ GD N + D +NP + Sbjct: 390 VPNSG-DGLKRLSYRIEEWDRTLSNHIKELEKSKPVVLTGDLNCAHEEIDIFNPAGNKRS 448 Query: 173 ACFTLEVRQ-SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 A FT+E RQ L + GF D R H Y++W Y NKG R+D+ ++S Sbjct: 449 AGFTIEERQSFGANLLDKGFVDTFRKQHPGVVGYTYWGYRHGGRKTNKGWRLDYFLVSQS 508 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + +H + I G SDH P+ + L + Sbjct: 509 IAANVHDSYILPDING----SDHCPIGLILKL 536 >gi|297739882|emb|CBI30064.3| unnamed protein product [Vitis vinifera] Length = 542 Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats. Identities = 68/272 (25%), Positives = 117/272 (43%), Gaps = 23/272 (8%) Query: 4 VTVATWNVNSIRARIH--NL--AAWIKENNPDIICLQETKTEDKNFPFETLQS---LNYH 56 V + +WNVN +R + + + D++ LQETK ++K+ E ++ Y Sbjct: 282 VKLMSWNVNGLRGLLKSKGFSALKLAQREDFDVLSLQETKLQEKDV--EAIKQSVIEGYE 339 Query: 57 IETCGQK----SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 Y+G AI+S+ +P+ + L D D + R + A F + + + Y Sbjct: 340 NSFWTCSVSKLGYSGTAIISRIKPLSVRYGLGISDHDSEGRLLTAEFE----SFYLLSGY 395 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 +P+ + +++ L + LE +P+I GD N Q D ++P Sbjct: 396 VPNSG-DGLKRLSYRVTQWDSALGSYMKELEKSKPVILTGDLNCAHQEIDIHDPAGNRRS 454 Query: 173 ACFTLEVRQ-SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 A FT E RQ + + GF D+ R H Y++W Y NKG R+D+ ++S Sbjct: 455 AGFTDEERQSLEKNFLSKGFVDSFRKQHPGVVGYTYWGYRNGCRKSNKGWRLDYFLVSES 514 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +H + I G SDH P+ + L + Sbjct: 515 IADKVHDSYILPDIGG----SDHCPIGLVLKL 542 >gi|225441351|ref|XP_002274714.1| PREDICTED: similar to apurinic endonuclease-redox protein [Vitis vinifera] Length = 490 Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats. Identities = 68/272 (25%), Positives = 117/272 (43%), Gaps = 23/272 (8%) Query: 4 VTVATWNVNSIRARIH--NL--AAWIKENNPDIICLQETKTEDKNFPFETLQS---LNYH 56 V + +WNVN +R + + + D++ LQETK ++K+ E ++ Y Sbjct: 230 VKLMSWNVNGLRGLLKSKGFSALKLAQREDFDVLSLQETKLQEKDV--EAIKQSVIEGYE 287 Query: 57 IETCGQK----SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 Y+G AI+S+ +P+ + L D D + R + A F + + + Y Sbjct: 288 NSFWTCSVSKLGYSGTAIISRIKPLSVRYGLGISDHDSEGRLLTAEFE----SFYLLSGY 343 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 +P+ + +++ L + LE +P+I GD N Q D ++P Sbjct: 344 VPNSG-DGLKRLSYRVTQWDSALGSYMKELEKSKPVILTGDLNCAHQEIDIHDPAGNRRS 402 Query: 173 ACFTLEVRQ-SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 A FT E RQ + + GF D+ R H Y++W Y NKG R+D+ ++S Sbjct: 403 AGFTDEERQSLEKNFLSKGFVDSFRKQHPGVVGYTYWGYRNGCRKSNKGWRLDYFLVSES 462 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +H + I G SDH P+ + L + Sbjct: 463 IADKVHDSYILPDIGG----SDHCPIGLVLKL 490 >gi|197120879|ref|YP_002132830.1| exodeoxyribonuclease III Xth [Anaeromyxobacter sp. K] gi|196170728|gb|ACG71701.1| exodeoxyribonuclease III Xth [Anaeromyxobacter sp. K] Length = 265 Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats. Identities = 60/259 (23%), Positives = 103/259 (39%), Gaps = 13/259 (5%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + TWNVN IRAR + +I PD++CLQE K P + Y G+ Sbjct: 1 MKIGTWNVNGIRAREAQVGEFIAREAPDVVCLQEIKAPPSKVPPSLCELEGYWCLWHGET 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +Y+GVA+L + D++ R + + ++Y+P+G + K Sbjct: 61 AYSGVALLVRKAIAPERPAFVHPPFDLETRIATCELGG----VTVASIYVPNGGKDLAAK 116 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 ++ RFA+ L+ GD N+ D + E R F Sbjct: 117 LRF----LEAMERFAADAQASGRRLVLCGDLNVARTDLDVHPKERKAGAIGQLPEERALF 172 Query: 184 QKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 +++ + G D RA L+++W + + +N G RID+++ S + R+ Sbjct: 173 ERILSRGLVDVGRALDPANEGLFTWWAPWRNLRQRNIGWRIDYVLASASLAASATRCRVL 232 Query: 243 TKPRGWTKPSDHTPVIVSL 261 SDH PV+ Sbjct: 233 AD----FGTSDHAPVVAEF 247 >gi|261337556|ref|ZP_05965440.1| exodeoxyribonuclease III [Bifidobacterium gallicum DSM 20093] gi|270277965|gb|EFA23819.1| exodeoxyribonuclease III [Bifidobacterium gallicum DSM 20093] Length = 286 Score = 151 bits (380), Expect = 1e-34, Method: Composition-based stats. Identities = 59/285 (20%), Positives = 103/285 (36%), Gaps = 24/285 (8%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFP------FETLQSLNY 55 +TV T N+N IRA W++++ PD++CLQE + E ++ Sbjct: 2 TITVTTANLNGIRAAERKGFEKWVQKHTPDVLCLQELRAPQDAIDSIFEQYAEDYKNAGK 61 Query: 56 HIETCGQKSYNGVAILSKYQ-----------PIEIVTHLPGDDLDVQARFIEATFTINTQ 104 + G + + V++ + G+D D T Sbjct: 62 IAQPEGLSTIDQVSVFKGRAGVGELSSLEVLDKRVGLPGDGEDADTGRWTEMDVKTPQGY 121 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRL----ELEEPLIFAGDYNIIPQP 160 + + NLY GN TK + K + + A+Q + + GD+NI Sbjct: 122 VITVCNLYNHAGNMDDPTKMEQKYHMLDAIMERAAQLRDEAAHGGKQSLIVGDFNIAHTD 181 Query: 161 HDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSWSKN 218 D + E + F+ + R KL + + D Y++W ++ N Sbjct: 182 LDIKDATTNETHSGFSPKERAYITKLIDEYEFVDVVRDLAGDIQGPYTWWSNRGRAFENN 241 Query: 219 KGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 G RID+ +PE I + + SDH P+ V+ D+ Sbjct: 242 VGWRIDYQFATPEIAQTARGFEISRAKAWYARWSDHAPLTVTYDV 286 >gi|301166270|emb|CBW25845.1| putative exodeoxyribonuclease [Bacteriovorax marinus SJ] Length = 256 Score = 151 bits (380), Expect = 2e-34, Method: Composition-based stats. Identities = 52/261 (19%), Positives = 89/261 (34%), Gaps = 7/261 (2%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNV IRA L W E ++ C QETK + + + + H Sbjct: 1 MKIYSWNVAGIRACEKKGLYDWYLEELAEVYCFQETKALPEQLNDQLVNPKS-HSAIYAP 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 G + +S + I + T + N Y P+G + Sbjct: 60 AVKKGYSGVSTWVKSGIEHKHTIGLGIEEFDNEGRTIITEFDNFFLFNCYFPNGQRDHAR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + ++ +I GDYN P D NP F R+ Sbjct: 120 VPYKMSYCKAIEEKAQELHQQFKKDIIITGDYNTAHHPIDLANPKTNTKSTGFLPLEREW 179 Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 + +G+ D R Y++W Y ++ +N G RID+ + + + Sbjct: 180 MDHFEEIGYVDIFRHFTPEENGHYTWWTYRSNCRERNIGWRIDYFWTNKDMLKNIKGCSH 239 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 T G SDH P+ + L+ Sbjct: 240 HTDILG----SDHCPISLELN 256 >gi|21674945|ref|NP_663010.1| AP Xth family endonuclease [Chlorobium tepidum TLS] gi|21648175|gb|AAM73352.1| AP (apurinic or apyrimidinic) endonuclease, xth family [Chlorobium tepidum TLS] Length = 253 Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats. Identities = 59/261 (22%), Positives = 100/261 (38%), Gaps = 9/261 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + TWN+N IRAR LAAW+ PDI+ L+E K + P Y G Sbjct: 1 MNIFTWNINGIRARKEALAAWLDSRKPDIVVLEEIKAQVSEIPETIRDFAGYRKFWNGST 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 G + + + + T ++ + Y+P G+ + Sbjct: 61 FKKGYSGVGLLVRDGSLDEFTCEPPPF--DIENRTLVLHAPQFTLIGTYVPRGD--GEER 116 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y K+ ++ F ++ L +I GD N+ + D + E R + Sbjct: 117 YAVKLRYLADLKAFIAELLTEGREVILLGDINVALRDIDVHRSQNKPGAIGLRPEERAAI 176 Query: 184 QKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 + +G D +R + L+++W + + +N G RID I L+P + +D Sbjct: 177 EAHLGLGLLDIVRELNPDKKDLFTWWPNWKFARERNLGWRIDCIYLTPALARKVSGVSVD 236 Query: 243 TKPRGWTKPSDHTPVIVSLDI 263 K SDH PV V L + Sbjct: 237 LD----EKSSDHAPVSVKLSL 253 >gi|220915579|ref|YP_002490883.1| exodeoxyribonuclease III Xth [Anaeromyxobacter dehalogenans 2CP-1] gi|219953433|gb|ACL63817.1| exodeoxyribonuclease III Xth [Anaeromyxobacter dehalogenans 2CP-1] Length = 264 Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats. Identities = 60/259 (23%), Positives = 103/259 (39%), Gaps = 13/259 (5%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + TWNVN IRAR + +I PD++CLQE K P + Y G+ Sbjct: 1 MKIGTWNVNGIRAREAQVGEFIAREGPDVVCLQEIKAPPSKVPPSLCELEGYWCLWHGET 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +Y+GVA+L + D++ R + + ++Y+P+G + K Sbjct: 61 AYSGVALLVRKAIAPERPAFVHPPFDLETRIATCELGG----VTVASIYVPNGGKDLAAK 116 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 ++ RFA+ L+ GD N+ D + E R F Sbjct: 117 LRF----LEAMERFAADAQASGRRLVLCGDLNVARTDLDVHPKERKAGAIGQLPEERALF 172 Query: 184 QKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 +++ + G D RA L+++W + + +N G RID+++ S + R+ Sbjct: 173 ERILSRGLVDVGRALDPANEGLFTWWAPWRNLRQRNIGWRIDYVLASASLAASATRCRVL 232 Query: 243 TKPRGWTKPSDHTPVIVSL 261 SDH PV+ Sbjct: 233 AD----FGTSDHAPVVAEF 247 >gi|242004144|ref|XP_002422991.1| Recombination repair protein, putative [Pediculus humanus corporis] gi|212505907|gb|EEB10253.1| Recombination repair protein, putative [Pediculus humanus corporis] Length = 332 Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats. Identities = 70/258 (27%), Positives = 122/258 (47%), Gaps = 13/258 (5%) Query: 5 TVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFE-TLQSLNYHIETCGQ 62 +++WNV S+++ N +++ +PD++C QETK +KN P E L + + + Sbjct: 79 KISSWNVVSLKSITNKNGMEYVRRESPDVMCFQETKCSEKNAPSESKLPGYHRYFAAGVK 138 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 + Y GVA+ SK +P+ + + + D + R I A + + Y+P+ T Sbjct: 139 EGYAGVALYSKLKPLSVKIGIGHKEHDTEGRVITAEYE----DFYLVTAYVPNAGRGLVT 194 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + ++L+ E+P+I GD N+ D NP A FT E R Sbjct: 195 LPKRLKWDVA--FKGYLKKLDSEKPVILCGDLNVAHNEIDLKNPSTNTKTAGFTQEERDG 252 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F KL N GF D R + Y++W+Y ++ S+N G R+D+ ++S S + + I Sbjct: 253 FTKLLNAGFIDTFRKLYPNKEGAYTYWNYIGNARSRNAGWRLDYFVVSERIMSTVCDSVI 312 Query: 242 DTKPRGWTKPSDHTPVIV 259 + G SDH P+ + Sbjct: 313 RKEVYG----SDHCPITL 326 >gi|282159248|gb|ADA78639.1| exodeoxyribonuclease III [Francisella tularensis subsp. tularensis NE061598] Length = 258 Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats. Identities = 59/264 (22%), Positives = 111/264 (42%), Gaps = 17/264 (6%) Query: 7 ATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQ 62 T+N N IRA W K + D +C+QETK + + Y + + Sbjct: 1 MTFNANGIRAAARKGFWEWFKTQDVDFLCMQETKAQFHQLEKDIEHFPTGYYYEFKDAVK 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +P++++ L D D + R+I+ + I +LYLP G+ Sbjct: 61 KGYSGTAIYAKKKPLKVIKELGLDWADDEGRYIQFDYE----NFSIASLYLPSGS-SGDV 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF--TLEVR 180 + + K+ +++++ +++E I GD+NI+ + D N E Sbjct: 116 RQEYKMQFLEKYKEILKEQVESGRDFIVCGDFNIVHKEIDIKNWKSNYGKTSGVLPEEQA 175 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH--S 238 ++G+ D R + Y++W + + N G RID+ + + + S Sbjct: 176 WLDHIFDDLGWVDTFRVINHEPLQYTWWSNRGQARANNVGWRIDYHISTSALKDKVVPES 235 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 + + SDH P+ ++ D Sbjct: 236 DYVYKE----NWFSDHAPLTINYD 255 >gi|111017313|ref|YP_700285.1| exodeoxyribonuclease III [Rhodococcus jostii RHA1] gi|110816843|gb|ABG92127.1| probable exodeoxyribonuclease III [Rhodococcus jostii RHA1] Length = 304 Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats. Identities = 57/303 (18%), Positives = 103/303 (33%), Gaps = 44/303 (14%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +AT+NVN IRA W+ + PD++ LQE + + P + + Sbjct: 1 MRIATFNVNGIRAAQRRGFEDWLGDRGPDVVALQEVRARAEAIPPGVFGHYHLTYDEGDV 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT----------------- 105 NGVA+L++ P+ + T + ++ + Sbjct: 61 AGRNGVAVLTRGAPVAVRTWSGTALMRAPGEMHTDRVELDPEPLARGLGEFANQGRYVEV 120 Query: 106 ------LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL--------------- 144 + + ++YLP G + ++ +++ Sbjct: 121 DLAEAPITVASMYLPKGGLPAHLQKPGRMREAPDGGARYDRKMRFLSAFARQLTRSRRTA 180 Query: 145 ---EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAI--RATH 199 L+ GD NI D N F E R+ F + + + R Sbjct: 181 RARGRELLLMGDLNIAHTRSDVRNWRRSNQAEGFLPEEREWFDSILSPRTLVDVVRRQHP 240 Query: 200 DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 YS+W + S+ + G RID+ + +P+ +A D P + SDH PV+V Sbjct: 241 GVDGPYSWWSWLGQSFVNDIGWRIDYHLATPDLARAAVTAGTDRDPVADRRMSDHAPVVV 300 Query: 260 SLD 262 D Sbjct: 301 DYD 303 >gi|218887544|ref|YP_002436865.1| exodeoxyribonuclease III [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758498|gb|ACL09397.1| exodeoxyribonuclease III [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 259 Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats. Identities = 69/269 (25%), Positives = 108/269 (40%), Gaps = 17/269 (6%) Query: 3 VVTVATWNVNSIRARIHNL--AAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET- 59 ++ + +WNVN IRA + W + I+ LQETK E + P + Sbjct: 2 LLKLYSWNVNGIRA-LSGKPEWNWFAGCDGHIVGLQETKAEPEQVPAAHRDPEGWKAWWL 60 Query: 60 --CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 +K Y+GVA+ S+ +P+ + +P + R I F I G Sbjct: 61 ASRVKKGYSGVAVFSRVEPLAVHLDMPDPAWQGEGRCIHLEFPAF-HYFNIYFPNGGQGE 119 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + K ++ L +P++ GD+N +P D P E+ + F Sbjct: 120 ERLNYKLGF-----YDAFLNHAEDLRRHKPIVVCGDFNTAHRPIDLARPKDNEDISGFLP 174 Query: 178 EVRQSFQKLQNMGFTDAIR-ATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 R + G+ D R DT H YS+W Y + +N G RID+ +S E + Sbjct: 175 IERAWMDRFTAAGYVDTFRLVQGDTPHAYSWWSYKTRARERNVGWRIDYFFVSEELRGAV 234 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 A ID G SDH PV ++LD+ Sbjct: 235 RDAWIDMHVMG----SDHCPVGLALDVDM 259 >gi|332040638|gb|EGI77013.1| exodeoxyribonuclease III Xth [Hylemonella gracilis ATCC 19624] Length = 265 Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats. Identities = 64/269 (23%), Positives = 113/269 (42%), Gaps = 14/269 (5%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFP--FETLQSLNYHIET 59 + + + N+N IR+ L AW+++ PD IC+QE K + + FE L L H Sbjct: 1 MFNLVSLNLNGIRSATSKGLEAWLEKTRPDCICVQEVKAQAPDVAGKFEQLAGLQGHFHY 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GVA+ +K+ P +++ + D + R++E + + L + + Y P G+ Sbjct: 61 AEKKGYSGVAVYTKHAPSDVLIGYGSPEFDAEGRWVELRYDTPKRKLSLISCYFPSGSSG 120 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + + + Q L + I GD NI + D N ++ F E Sbjct: 121 EDRQQAKFRFLDEMWA--HLQSLRGQREFILCGDVNIAHKEMDLKNWKGNLKNSGFLPEE 178 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHL-----YSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 R KL + + Y++W +++KN G RID+ + +P + Sbjct: 179 RAWMTKLLDPQQGGLVDVYRTLEPEAIDTAYTWWSNRGQAYAKNVGWRIDYHLATPALAA 238 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 L + K SDH P+ V D+ Sbjct: 239 LARQTGVYKD----EKFSDHAPLSVRYDL 263 >gi|209966061|ref|YP_002298976.1| endonuclease [Rhodospirillum centenum SW] gi|209959527|gb|ACJ00164.1| endonuclease [Rhodospirillum centenum SW] Length = 266 Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats. Identities = 78/267 (29%), Positives = 124/267 (46%), Gaps = 12/267 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG-Q 62 + + TWN+NS+R R+ L + E+ PD++CLQETKT D FP L Y Sbjct: 1 MRLCTWNINSVRLRLPLLLRLLDEHAPDVVCLQETKTVDDTFPLRELAERGYRFAHIHGM 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 KSYNGVAILS+ + D + AT + + NLY+P G + Sbjct: 61 KSYNGVAILSRLELGAREVRHWCGREDCRH---IATTLPVGPGIELHNLYIPAGGDVPDP 117 Query: 123 ----KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 K+ K+ ++ +R+ ++ + P+I GD NI P D ++ + T Sbjct: 118 AVNEKFAHKLQFLDEMIRWWPEQRSPDRPMILVGDLNIAPLETDVWSHRQLLDVVSHTPV 177 Query: 179 VRQSFQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSL 235 + ++Q R +T LY++W Y + W + ++G R+DH+ ++P Sbjct: 178 EVEKLTQVQRTLGWVDAVRRFVPETEKLYTWWSYRSADWAASDRGRRLDHVWVTPPLAPA 237 Query: 236 LHSARIDTKPRGWT-KPSDHTPVIVSL 261 L + + RGW KPSDH PV+V Sbjct: 238 LAGTTVLREARGWEPKPSDHVPVLVDF 264 >gi|326793816|ref|YP_004311636.1| exodeoxyribonuclease III Xth [Marinomonas mediterranea MMB-1] gi|326544580|gb|ADZ89800.1| exodeoxyribonuclease III Xth [Marinomonas mediterranea MMB-1] Length = 258 Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats. Identities = 62/266 (23%), Positives = 113/266 (42%), Gaps = 13/266 (4%) Query: 4 VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETL---QSLNYHIET 59 + V + NVN IR A W+ NPD++CLQ+ + ++++ + Y ++ Sbjct: 1 MKVISLNVNGIRQAAERGFFDWMVRQNPDVVCLQDLQVDERSLNDSVFFPPEYNTYFFDS 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 GVAI K P I+T + + D + RFI+A F + + + PHG+ Sbjct: 61 MEDPEQAGVAIYCKAMPKAIMTGMGFPECDFEGRFIQADFD----NVSVASFLAPHGSNN 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-E 178 K ++++ F + IF G N+ P D + + + ++ F E Sbjct: 117 EEPLQAHKYAFMEGFKNHLIKTRRKRREFIFCGTANVARSPIDVSSWFVNQRNSGFLPDE 176 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 + + + DA R + Y++W Y +W N+G R+D+ + +P + + Sbjct: 177 RKWINEIFNEHEYIDAYRQVNKQDKQYTWWPDYERAWKLNEGGRLDYQITTPGIKNQIQG 236 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIP 264 + R SDH P+I+ DI Sbjct: 237 GGVYKGQR----FSDHAPLIMEYDID 258 >gi|241766798|ref|ZP_04764623.1| exodeoxyribonuclease III Xth [Acidovorax delafieldii 2AN] gi|241362815|gb|EER58576.1| exodeoxyribonuclease III Xth [Acidovorax delafieldii 2AN] Length = 271 Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats. Identities = 69/271 (25%), Positives = 111/271 (40%), Gaps = 16/271 (5%) Query: 2 SVVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFP--FETLQSLNYHIE 58 S+ + + N+N IR A + WI PD IC+QE K + + FE L L H Sbjct: 4 SLFKLTSLNLNGIRSAASKGVERWIAATRPDCICVQEVKAQAADIATRFEQLAGLQGHFH 63 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 +K Y+GV I ++++P +++ + D + R+IE F + L I + Y P G+ Sbjct: 64 FAQKKGYSGVGIYTRHEPSDVIAGYGSPEFDAEGRYIELRFDTPARKLSIISAYFPSGSS 123 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + + E I GD NI Q D N + ++ F E Sbjct: 124 GEERQLA--KYRFLEAFHPHLMATKGEREFILCGDINIAHQQIDLKNWRSNQKNSGFLPE 181 Query: 179 VRQSFQKLQN-----MGFTDAIRATHDT--HHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 R KL + G D R T Y++W +++ N G R+D+ + +P Sbjct: 182 ERAWMTKLLHTTDPGGGLVDVYRQLQPTATDTAYTWWSNRGQAYANNVGWRLDYHLATPA 241 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 +L + I K SDH P+ V + Sbjct: 242 LAALARAEHIYKD----EKFSDHAPITVDYE 268 >gi|228909564|ref|ZP_04073387.1| Exodeoxyribonuclease [Bacillus thuringiensis IBL 200] gi|228849853|gb|EEM94684.1| Exodeoxyribonuclease [Bacillus thuringiensis IBL 200] Length = 244 Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats. Identities = 59/243 (24%), Positives = 108/243 (44%), Gaps = 12/243 (4%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80 +++E++ DI CLQE K ++ L+ + +K Y+G AI SK +P+ + Sbjct: 12 FLEYLEESSADIFCLQEIKLQEGQIDLN-LEGYYTYWNYAVKKGYSGTAIFSKKEPLSVT 70 Query: 81 THLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQ 140 L ++ D + R I F + + D ++ W F + + Sbjct: 71 YGLGIEEHDQEGRLITLEFEDFYMI-----TLYTPNSKRGLERLDYRMKWEDDFRSYIKR 125 Query: 141 RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHD 200 L+ ++ +IF GD N+ + D NP + F+ E R+ F + GF D R + Sbjct: 126 -LDEKKTVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKFTCILEEGFVDTYRYLYP 184 Query: 201 -THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 YS+W Y + +KN G R+D+ ++S + +I+++ G SDH PV + Sbjct: 185 NQEGAYSWWSYRMGARAKNIGWRLDYFVVSERMKDQITEVKINSEVMG----SDHCPVEL 240 Query: 260 SLD 262 ++ Sbjct: 241 YIN 243 >gi|225351376|ref|ZP_03742399.1| hypothetical protein BIFPSEUDO_02970 [Bifidobacterium pseudocatenulatum DSM 20438] gi|225157720|gb|EEG71003.1| hypothetical protein BIFPSEUDO_02970 [Bifidobacterium pseudocatenulatum DSM 20438] Length = 286 Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats. Identities = 66/286 (23%), Positives = 99/286 (34%), Gaps = 26/286 (9%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI---- 57 +T+ T NVN IRA + W N PD+ C+QE + + Sbjct: 2 TITITTSNVNGIRAAKRKGIEEWAGRNTPDVWCMQEVRAPQNEIDP-IFDEFGFEYSTAG 60 Query: 58 ------------ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR--FIEATFTINT 103 E C K GV +LS ++ LPG + DV + T Sbjct: 61 RISDQSELHRMNEICRIKGRAGVGLLSALPVVDKRYGLPGLEDDVDSGRWIEADMQTPQG 120 Query: 104 QTLRIGNLYLPHGNPITS----TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159 + + +Y+ GN KY + + R + + + + GD+NI Sbjct: 121 YVITVVCVYVHAGNTDDPEKMKQKYRFLDTMLIRMEQLRDEAAHGGKQAVLCGDFNIAHT 180 Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSWSK 217 P D N E A F E R K + D Y++W ++ Sbjct: 181 PLDIKNAKANETHAGFLPEERAYVDKWLGELEFVDVMRNLAGDIQGPYTWWSQRGRAFDN 240 Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 N G RID+ +PE ID P + SDH P+ + DI Sbjct: 241 NVGWRIDYQFATPELAETACGFVIDKAPTYDLRWSDHAPLSIMYDI 286 >gi|257092320|ref|YP_003165961.1| exodeoxyribonuclease III Xth [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257044844|gb|ACV34032.1| exodeoxyribonuclease III Xth [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 266 Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats. Identities = 60/275 (21%), Positives = 107/275 (38%), Gaps = 15/275 (5%) Query: 3 VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ + T N+N IR A L +W N IICLQE K + + E + H Sbjct: 1 MLRIITLNLNGIRSAWRKGLYSWSVAQNAHIICLQELKAQHADLGDEMHKPDGLHTYYRY 60 Query: 62 --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 K Y+GV + + +P +V L + D + R++ A F + Sbjct: 61 AENKGYSGVGLWCRKKPDRVVDVLGSPEFDREGRYLRADFGALSV-----VCLYQPSGSS 115 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + + + K ++ + ++ GD+NI Q D N ++ F E Sbjct: 116 SEQRQEAKFRFMALIYPHLLELAASGRDVVVCGDWNIAHQEIDLKNWRSNRRNSGFLPEE 175 Query: 180 RQSFQKL-QNMGFTDAIRATHDT--HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 R +L G+ D R H Y++W +W+KN G R+D+ + +P + Sbjct: 176 RAWVSRLLNEGGWCDVYRRLHPESTEESYTWWSNRGQAWAKNVGWRLDYQLATPAIAATA 235 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271 A + + R SDH P+ + + + + Sbjct: 236 RHAAVYKEQR----FSDHAPLTIDYEYDLETDRGE 266 >gi|114566736|ref|YP_753890.1| DNA-(apurinic or apyrimidinic site) lyase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337671|gb|ABI68519.1| DNA-(apurinic or apyrimidinic site) lyase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 237 Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats. Identities = 52/245 (21%), Positives = 99/245 (40%), Gaps = 11/245 (4%) Query: 20 NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETCGQKSYNGVAILSKYQPI 77 W+KE PD++CLQETK + + Y + ++ Y+GVA + +P+ Sbjct: 2 GFIQWLKEEQPDVLCLQETKAHPEQLEESLVNIKGYQSCWNSGERRGYSGVACYFQKEPL 61 Query: 78 EIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF 137 ++ +L ++ D + R + + + + + K+ + + + F Sbjct: 62 QVEKNLGVEEFDREGRVLISFHEN-----LVLLNVYFPNGQMGEERLAYKLRFYEYLINF 116 Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA 197 + + L+ GD+N + D NP E + F R+ + + G+ DA R Sbjct: 117 CEELKKRYPRLVICGDFNTAHREIDLKNPKANEGRSGFLPIEREMLDRFLSYGYVDAFRY 176 Query: 198 THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257 + YS+W Y + +N G RID +S + + + G SDH P+ Sbjct: 177 LYPEKVQYSWWSYRTRARERNAGWRIDCFYVSEKLLDDIIDCEVLDHIPG----SDHCPI 232 Query: 258 IVSLD 262 + L Sbjct: 233 ALYLK 237 >gi|313232077|emb|CBY09188.1| unnamed protein product [Oikopleura dioica] Length = 392 Score = 149 bits (375), Expect = 5e-34, Method: Composition-based stats. Identities = 71/272 (26%), Positives = 117/272 (43%), Gaps = 19/272 (6%) Query: 3 VVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFP----FETLQSLNY-- 55 + + TWNV + A I +K + DI+CLQETK K P E L+ Y Sbjct: 130 MFRIVTWNVAGLYACIKKDFCKAVKTLDCDILCLQETKLSLKKPPPAEIAEQLKEWKYRN 189 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + + G+ Y+G AILSK +PI + + F + + + + Sbjct: 190 YANSEGKAGYSGTAILSKSKPISVQRGIGKTKH---DDFGRSCTAEFEKFFLVTSYVPNS 246 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND-AC 174 G D + + + LR +L ++P+I+ GD N+ D N N A Sbjct: 247 GR--GLVNLDYRTNEWESDLRNYLTKLNKDKPVIYCGDLNVAHTAIDLKNDKSNYNKSAG 304 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLS-PEA 232 +T +KL +G+ DA R + Y+FW Y + SKN G R+D+ ++ + Sbjct: 305 YTQAEIDELEKLLELGYVDAYRKLYPAEEDCYTFWSYMGGARSKNVGWRLDYFLMKIKDC 364 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 + + +K +G SDH PV + L++P Sbjct: 365 EEWIEDVVVHSKVQG----SDHCPVEIKLNLP 392 >gi|310831095|ref|YP_003969738.1| putative apurinic-apyrimidinic endonuclease 1 [Cafeteria roenbergensis virus BV-PW1] gi|309386279|gb|ADO67139.1| putative apurinic-apyrimidinic endonuclease 1 [Cafeteria roenbergensis virus BV-PW1] Length = 262 Score = 149 bits (375), Expect = 5e-34, Method: Composition-based stats. Identities = 72/271 (26%), Positives = 109/271 (40%), Gaps = 20/271 (7%) Query: 1 MSVVTVATWNVNSIRARIH--NLAAWIKENNPDIICLQETKTEDKNFP-----FETLQSL 53 M + WN+N I+A + NL I+ P IIC+ ETK E ++ Sbjct: 1 MPT-KIIAWNINGIKAHLKKDNLFDLIETEKPHIICMGETKISCPFIDVQNQLKEKIKGY 59 Query: 54 NYHIETCG--QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 Y + +K Y+G AI SK +PI + D + R I F Sbjct: 60 KYRYWSPCLVKKGYSGTAIFSKRKPISTYLGMNQPGEDDEGRMITLEFKE-----YYLIH 114 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 + + + + R L+ +P+I GD N+ + D NP + Sbjct: 115 VYTPNSGQGLVRLQYRTEEWDKNFRKYCANLQKIKPIIICGDLNVANENIDLANPSSNKK 174 Query: 172 DACFTL-EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230 +A FT E + L + D R + T YSFW YY ++ KN G RID+ ++S Sbjct: 175 NAGFTDVERKSFKLTLTKLNLIDTFRYLYPTDIKYSFWTYYHNARPKNIGWRIDYFLVSE 234 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + + + I T G SDH PVI+ L Sbjct: 235 KLLPKVKDSNILTHIMG----SDHAPVILKL 261 >gi|94984569|ref|YP_603933.1| exodeoxyribonuclease III (xth) [Deinococcus geothermalis DSM 11300] gi|94554850|gb|ABF44764.1| exodeoxyribonuclease III (xth) [Deinococcus geothermalis DSM 11300] Length = 267 Score = 149 bits (375), Expect = 6e-34, Method: Composition-based stats. Identities = 60/265 (22%), Positives = 103/265 (38%), Gaps = 18/265 (6%) Query: 2 SVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 S + V T NVN +R+ + L W+ PD++ LQE + E L Y Sbjct: 11 STLKVTTLNVNGLRSALRKGLTTWLARERPDVLLLQEVRAHPM---PEAFSDLGYAGAWF 67 Query: 61 --GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + Y+GVA+LS + ++ + + + +R ++YLP G+ Sbjct: 68 GAQKAGYSGVALLSLHPLSDVRAGM----AHPEMDAEGRVLSAVVWGVRFVSVYLPSGSS 123 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 K ++ + + L PL+ GDYNI D N ++ F Sbjct: 124 SPER-QSFKDRVLEDYHAWTQAALAEGLPLVIGGDYNIAHSELDLKNWRSNRKNSGFLPH 182 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R G TD RA Y++W +++ + G RID+++ A + Sbjct: 183 ERAWMSAHLACGLTDTHRAHLGERSEYTWWSQRGKAYANDVGWRIDYLLA---AGVPVRD 239 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263 +D R SDH P+ ++D+ Sbjct: 240 LWVDRAAR----LSDHAPLTGTVDL 260 >gi|325000932|ref|ZP_08122044.1| exodeoxyribonuclease III [Pseudonocardia sp. P1] Length = 281 Score = 149 bits (375), Expect = 6e-34, Method: Composition-based stats. Identities = 70/264 (26%), Positives = 113/264 (42%), Gaps = 8/264 (3%) Query: 6 VATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL---NYH---IE 58 +AT NVN +RA L W+ + D +CLQE + + P +L +H Sbjct: 8 LATANVNGVRAATGKGLLDWLAVADADAVCLQEVRARPEELPAALTDALAAAGWHLRLAP 67 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 K NGVA+LS+ +P + D+ R++E + + G Sbjct: 68 CETAKGRNGVAVLSRSEPEAVRIGFGDPATDLDGRYLEVDLPGDLTVASLYLPKGVAGTD 127 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 K ++ ++ ++ AGD+NI P D N + ++ F Sbjct: 128 KQDAKDAFLKTFGDHLRTAFARCAATGREMVVAGDWNIAPTEQDLRNWRNNQRNSGFLPH 187 Query: 179 VRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 R+ F L G+TD +RA H T YS+W Y ++ + G RIDH++ +P + H Sbjct: 188 EREWFAGLLEHGWTDVVRALHPGTDGPYSWWTYRGRAFDNDVGWRIDHLLTTPGLAAAAH 247 Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261 A ++ P T+ SDH PV+V L Sbjct: 248 EAVVERAPSHDTRWSDHAPVVVRL 271 >gi|307108235|gb|EFN56476.1| hypothetical protein CHLNCDRAFT_30910 [Chlorella variabilis] Length = 371 Score = 148 bits (374), Expect = 6e-34, Method: Composition-based stats. Identities = 56/277 (20%), Positives = 100/277 (36%), Gaps = 27/277 (9%) Query: 6 VATWNVNSIRARIHNLAA---------------WIKENNPDIICLQETKTEDKNFPFETL 50 + +WNV +RA + + + D++CLQE K ++ + E L Sbjct: 101 ILSWNVAGLRALLKKVKEVEAGTRNENIPTLVALAEAEQADVLCLQEIKLQEDH-CVEVL 159 Query: 51 QSL----NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 + L +H+ + G + + ++ G + + Sbjct: 160 KELNLPEGWHVSWNCSRDKKGYSGTAIVSRQAPLSVSCGIGAEEHDGEGRVITAEFSAFY 219 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 + G + ++ + +RLE +P++ GD N+ P D ++P Sbjct: 220 LVNCYTPNSGE--GLKRLGYRVEKWDKDFSAYLKRLEQHKPVVVTGDLNVAPAEIDIHSP 277 Query: 167 IIWENDACFTL-EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225 A FT E L GF D R + Y++W Y ++ NKG R+DH Sbjct: 278 KTNLKSAGFTPQERASFAANLLGQGFVDCFRTQYPEAVAYTYWGYRFNARGNNKGWRLDH 337 Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 ++S + S LH G SDH P+ + L Sbjct: 338 FLVSQQLHSSLHDCYHLPAIMG----SDHCPLGLVLK 370 >gi|145529087|ref|XP_001450332.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124417943|emb|CAK82935.1| unnamed protein product [Paramecium tetraurelia] Length = 348 Score = 148 bits (374), Expect = 7e-34, Method: Composition-based stats. Identities = 60/264 (22%), Positives = 102/264 (38%), Gaps = 7/264 (2%) Query: 3 VVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETL-QSLNYHIET 59 V +++WN+N IRA + ++ ++ DIICL E K + F E L H Sbjct: 86 TVKISSWNINGIRAVTKHESAVQYLNDSKFDIICLNELKADQDVFDKENLGAKFGKHYFL 145 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 + ++ D+ V E + Sbjct: 146 YLNFCKSKAGYSGVAIASKVKPLSVKCDIGVDKHDQEGRTLTAEFEQFYLVSCYVPNSGQ 205 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + D + + + L ++P I GD N+ D NP + A FTL+ Sbjct: 206 KLERLDYRTKEWDIDFQNYLEGLRKKKPTILCGDLNVAHHEIDLSNPAGNKKTAGFTLQE 265 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R F G+ D+ R H YSF+ ++S S+NKG R+D+ +++ EA+ + + Sbjct: 266 RDQFSNYLQKGWVDSFRHLHPKEVKYSFFSARSNSRSQNKGWRLDYFIINKEASDAITVS 325 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 I+ G SDH P+ +D+ Sbjct: 326 DINLTVEG----SDHVPIECEVDL 345 >gi|255024226|ref|ZP_05296212.1| 3'-exo-deoxyribonuclease exoA [Listeria monocytogenes FSL J1-208] Length = 216 Score = 148 bits (374), Expect = 8e-34, Method: Composition-based stats. Identities = 54/223 (24%), Positives = 95/223 (42%), Gaps = 9/223 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + +E + DI CLQETK ++ + L + + + Sbjct: 1 MKLISWNVNGLRAAVKKGFLEYFEEVDADIFCLQETKLQEGQIELD-LPAYKDYWNYAVK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +P+ + L + D + R I F + Sbjct: 60 KGYSGTAIFTKVEPLSVQYGLGVPEHDTEGRVITLEFEEFFMVTVYTPNSQAELKRLDYR 119 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + + L+ +P++ GD N+ + D NP +A F+ E R Sbjct: 120 M------TFEDAILEYVKNLDKTKPVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAK 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRID 224 F + GF D+ R + YS+W Y ++ ++N G RID Sbjct: 174 FSAFLDAGFIDSFRYFYPDLTDAYSWWSYRMNARARNTGWRID 216 >gi|123487248|ref|XP_001324898.1| exodeoxyribonuclease III family protein [Trichomonas vaginalis G3] gi|121907789|gb|EAY12675.1| exodeoxyribonuclease III family protein [Trichomonas vaginalis G3] Length = 289 Score = 148 bits (373), Expect = 9e-34, Method: Composition-based stats. Identities = 79/283 (27%), Positives = 122/283 (43%), Gaps = 19/283 (6%) Query: 3 VVTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTE-DKNFPFETLQSLNY--HIE 58 V+ +ATWNV S+RAR N +I + PDIIC+QETK D + + Y + Sbjct: 8 VIKIATWNVASLRARWKDNFTFYINSSKPDIICIQETKFHVDMKESLKNFKLDGYKGYFF 67 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + Y G I +KY+P+ + D + + INT + Sbjct: 68 HAKKAGYAGTCIYTKYKPVSVKRSFADPDGRCITMEFKNFYLINTYVV---------NAG 118 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + D KI +R LE ++P+I+ GD N+ +P D + E A +T E Sbjct: 119 EDLGRLDYKIKEWNPKIRNHIMELEKKKPVIWTGDLNVAHKPIDIWQAEGHEKIAGYTDE 178 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL--L 236 R+ F N G D R H H ++F++Y + SKN+G RID+ + + Sbjct: 179 ERKWFDDFLNEGHIDIYRELHPESHEFTFFNYRGQAKSKNQGWRIDYFITGKGNIEKLGI 238 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMK 279 I+ G SDH PVI+ D + K + TS ++ Sbjct: 239 SDCVIE----GTIDGSDHQPVILLADKDKIMKDDEPVTSSEVE 277 >gi|328767146|gb|EGF77197.1| hypothetical protein BATDEDRAFT_20862 [Batrachochytrium dendrobatidis JAM81] Length = 394 Score = 148 bits (373), Expect = 9e-34, Method: Composition-based stats. Identities = 62/265 (23%), Positives = 112/265 (42%), Gaps = 17/265 (6%) Query: 5 TVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQ----SLNYHIET 59 WNV +RA + + +I+ + D++CLQETK Y Sbjct: 116 KFIAWNVAGLRASLKKDMMRYIEAEDADVVCLQETKMNAS-LDTSMFSRKQYPHQYWSHC 174 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GV +LSK +P+ + + +D + RF+ + IG + G + Sbjct: 175 TTKKGYSGVMVLSKVKPLSVEYKMGHSAIDDEGRFVILEYQ---DFYYIGCYIMNAGADL 231 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + + L+ ++P+I++GD N+ D P A FT E Sbjct: 232 GRLDLKREHYVKLKKFMGE---LQSKKPVIWSGDLNVAHTEIDLARPATNTKSAGFTPEE 288 Query: 180 R-QSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 R L ++ D+ R H T +YS++ + +S + N G R+D+ ++S + Sbjct: 289 REDFGNLLTDLDMVDSFRLKHPTATGMYSYYSFRHNSRANNVGWRLDYFVVSKALQDDII 348 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLD 262 A I ++ G SDH P+++ L+ Sbjct: 349 EADIRSEIYG---ASDHVPILLLLN 370 >gi|167628004|ref|YP_001678504.1| DNA-(apurinic or apyrimidinic site) lyase [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167598005|gb|ABZ88003.1| DNA-(apurinic or apyrimidinic site) lyase [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 258 Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats. Identities = 59/262 (22%), Positives = 108/262 (41%), Gaps = 13/262 (4%) Query: 7 ATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQ 62 T+N N IRA W + D +C+QETK + + Y + + Sbjct: 1 MTFNANGIRAAARKGFWEWFTTQDVDFLCIQETKAQFHQLEKDEQHFPDGYYYDFKDAVK 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +P++++ L D D + R+I+ + I +LYLP G+ Sbjct: 61 KGYSGTAIYAKKKPLKVIKELGLDWADDEGRYIQFDYE----NFSIASLYLPSGS-SGDV 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF--TLEVR 180 + + K+ +++++ ++ E I GD+NI+ + D N + E Sbjct: 116 RQEYKMQFLEKYKEILKEQTESGRDFIVCGDFNIVHKEIDIKNWKSNYDKTSGVLPEEQA 175 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 ++G+ D R + Y++W + + N G RID+ + +P + Sbjct: 176 WLDHIFDDLGWVDTFRVINHEPLQYTWWSNRGQARANNVGWRIDYHISTPALKDKVVPES 235 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 SDH P+ +S D Sbjct: 236 --DYVYKENWFSDHAPLTISYD 255 >gi|297625750|ref|YP_003687513.1| Exodeoxyribonuclease III/exonuclease III [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921515|emb|CBL56069.1| Exodeoxyribonuclease III/exonuclease III [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 313 Score = 148 bits (372), Expect = 1e-33, Method: Composition-based stats. Identities = 58/313 (18%), Positives = 99/313 (31%), Gaps = 52/313 (16%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ +AT+NVN IRA W + PD+ CLQE + + P E + + Sbjct: 1 MLRLATYNVNGIRAAQRRGFTGWKQRCLPDVACLQEVRCPYEALPMEAFAGFHVAYDAGE 60 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLD---------------------------VQARF 94 K NGVA+LS+ + Sbjct: 61 LKGRNGVAVLSRTPFDAVRVWSDQAMFISPAGDARMAGADELSVPDYPLARPLRSFNHEG 120 Query: 95 IEATFTINTQTLRIGNLYLPHGN----------------------PITSTKYDDKISWIK 132 + Q L + +Y+P G+ K + + Sbjct: 121 RYVEVDLADQPLTVACVYVPKGDSLLAPGIRSRDPLTDEQLAGVQRRYDRKMAFLAGFSR 180 Query: 133 RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192 R + GD+NI D N + + F E R + + Sbjct: 181 HLTRARRAAHAAGREFLVVGDFNIAHTRLDVKNWRPAQKASGFLPEERAWLSEQLSPRTL 240 Query: 193 DAIRA--THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 + D YS+W + +++++ G RID+ + SP+ A +D + Sbjct: 241 VDVVRAAHPDQDGPYSWWSWMGQAFARDTGWRIDYHLASPQLARRSARAFVDRDHGADER 300 Query: 251 PSDHTPVIVSLDI 263 SDH V+V D+ Sbjct: 301 VSDHAAVVVDYDL 313 >gi|297571824|ref|YP_003697598.1| exodeoxyribonuclease III Xth [Arcanobacterium haemolyticum DSM 20595] gi|296932171|gb|ADH92979.1| exodeoxyribonuclease III Xth [Arcanobacterium haemolyticum DSM 20595] Length = 290 Score = 148 bits (372), Expect = 1e-33, Method: Composition-based stats. Identities = 63/287 (21%), Positives = 99/287 (34%), Gaps = 27/287 (9%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + VAT NVN IRA + WI +PD++ LQE + ++ P ++ + C Sbjct: 1 MLVATCNVNGIRAAVRKGFHEWIAVVSPDVLLLQEVRAPEELVPELIGENYTVIQQACDI 60 Query: 63 KSYNGVAI---------------------LSKYQPIEIVTHLPGDDLDVQARFIEATFTI 101 K GVAI P + R+IE Sbjct: 61 KGRAGVAIAVKKGVDVGRISIGLGSDLPDCEPDTDALASWDRPAEPPVDTGRWIEVDIPA 120 Query: 102 NTQTLRIGNLYLPHGNPITSTK--YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159 T L+ Y R + + R E ++ AGD+NI+ Sbjct: 121 YKTTFVSAYLHSGTATDQAKMDAKYAHLDRVTTRLAQLRTNRSEELPHILVAGDFNIVHT 180 Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH---DTHHLYSFWDYYADSWS 216 D N N L+ ++ + D Y++W ++ Sbjct: 181 ERDITNWKSNHNKTAGVLDPEIAYVDKWTETMGYIDVQRYLIGDEQAEYTWWSQRGKAFD 240 Query: 217 KNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 N G RID+ ++ P+ HS RID + SDH P+IV+ D+ Sbjct: 241 NNVGWRIDYHLVDPDLAQRAHSLRIDRAESYDQRWSDHAPLIVTYDV 287 >gi|312602232|ref|YP_004022077.1| ATP-dependent DNA ligase [Burkholderia rhizoxinica HKI 454] gi|312169546|emb|CBW76558.1| ATP-dependent DNA ligase (EC 6.5.1.1) [Burkholderia rhizoxinica HKI 454] Length = 1123 Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats. Identities = 75/237 (31%), Positives = 123/237 (51%), Gaps = 3/237 (1%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSY 65 +A +N+N +RAR+ L W++ PD++CLQE KT D+ FP L+ Y GQ ++ Sbjct: 11 IAIFNINGLRARLGQLLEWLEHEGPDVVCLQELKTPDERFPASDLERAGYGALWRGQAAW 70 Query: 66 NGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYD 125 +GV IL++ + V + ++ L I +LYLP+ NP K+D Sbjct: 71 SGVTILARGEQPRAVRR---ALPGFETDTHNRYLEVSVAGLLIASLYLPNDNPQPGPKFD 127 Query: 126 DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQK 185 K++W + + A+ + P++ AG+YN++ D YNP W DA + RQ + + Sbjct: 128 YKLAWFDKLIEHAATMVNDSRPVVLAGNYNVVLTDEDIYNPRSWLKDALLQPQSRQRYAQ 187 Query: 186 LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 L G+TDA R H Y+FWD + W + G+RI+H++L+ L +A +D Sbjct: 188 LLAQGWTDARRVLHPDKRNYTFWDDFRQHWQTHSGLRIEHLLLNRALAPALTAAEVD 244 >gi|254472466|ref|ZP_05085866.1| exodeoxyribonuclease III protein [Pseudovibrio sp. JE062] gi|211958749|gb|EEA93949.1| exodeoxyribonuclease III protein [Pseudovibrio sp. JE062] Length = 243 Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats. Identities = 72/243 (29%), Positives = 114/243 (46%), Gaps = 7/243 (2%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKSYNGVAILSKYQPIEIVTHL 83 + ++ PD++CLQETK D +FP + L Y ++E GQK Y+GVA+LS+ + Sbjct: 2 LLDHAPDVLCLQETKCPDGSFPSAAINKLGYRYVEVHGQKGYHGVALLSRVPLENVERKE 61 Query: 84 PGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRF-LRFASQRL 142 + R I A N +RI N Y+P G + + +DK + +F S Sbjct: 62 FCEMG--DTRHIAADVAFNGGKVRIHNFYVPAGGDVPDPEVNDKFAHKLKFLDEMESWFK 119 Query: 143 ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVRQSFQKLQNMGFTDAIRATHDT 201 + I GD NI P +D ++ T E ++ + + D +R Sbjct: 120 GFDGQSIVVGDLNIAPYENDVWSHKQLIKVVSHTPLECQRLEDVREAGNYVDTMRKHMPM 179 Query: 202 H-HLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 +Y++W Y A W + +KG R+DH+ ++PE +I RGW KPSDH PV+ Sbjct: 180 DQKIYTWWSYRAKDWSASDKGRRLDHVWMTPETAQHTKDVQIMRDARGWEKPSDHAPVMA 239 Query: 260 SLD 262 L+ Sbjct: 240 VLE 242 >gi|283782977|ref|YP_003373731.1| putative exodeoxyribonuclease III [Gardnerella vaginalis 409-05] gi|283441148|gb|ADB13614.1| putative exodeoxyribonuclease III [Gardnerella vaginalis 409-05] Length = 288 Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats. Identities = 64/288 (22%), Positives = 102/288 (35%), Gaps = 27/288 (9%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNF-PFETLQSLNYHI--- 57 ++T+ T N+N IRA + W + PD+ C+QE + P T + Y Sbjct: 1 MITITTSNLNGIRAAERKGMLNWSDAHTPDVWCMQEVRAPQDAIDPIMTKIEMGYRTSEN 60 Query: 58 --------------ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR--FIEATFTI 101 E C K GVA+++ +E LPG + DV + T Sbjct: 61 IVNSIKNDNFTYTNEVCRVKGRAGVALVTSLPVVEKRYGLPGLNEDVDSGRWVETDVRTP 120 Query: 102 NTQTLRIGNLYLPHGNPIT----STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII 157 + I ++Y+ GN K+ + + R + I GD+NI Sbjct: 121 EGYEITIASVYVHAGNVDDPQKMQQKFRFLDTMLIRLGELRNIAASGGNQAILCGDFNIA 180 Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSW 215 D N E A F E R + N + D Y++W ++ Sbjct: 181 HTSLDIKNAKANEKSAGFLPEERAYIDRWINEYEFVDVMRMLAGDIQGPYTWWSQRGKAF 240 Query: 216 SKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 N G R+D+ +PE ID + SDH P+ + D+ Sbjct: 241 DNNVGWRLDYQFATPEIAESARGFVIDRAESYDARWSDHAPLSIKYDV 288 >gi|298345296|ref|YP_003717983.1| putative exodeoxyribonuclease III [Mobiluncus curtisii ATCC 43063] gi|315655715|ref|ZP_07908613.1| exodeoxyribonuclease III [Mobiluncus curtisii ATCC 51333] gi|298235357|gb|ADI66489.1| possible exodeoxyribonuclease III [Mobiluncus curtisii ATCC 43063] gi|315489779|gb|EFU79406.1| exodeoxyribonuclease III [Mobiluncus curtisii ATCC 51333] Length = 294 Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats. Identities = 51/294 (17%), Positives = 97/294 (32%), Gaps = 32/294 (10%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + V T NVN +RA W++ ++ D++CLQE + ++ + + H+ +C Sbjct: 1 MKVTTVNVNGVRAAFRKGFGDWLENDDSDLLCLQEVRATPQDTQDLFGPAWDVHVWSCRV 60 Query: 63 KSYNGVAILSKYQPIE----------------IVTHLPGDDLDVQARFIEATFTINTQTL 106 K GVA+ ++ + D I + Sbjct: 61 KGRAGVALGARRDSDWEIGQLTEGLPPDLYAEVGGEPDVDSGRWLEAAIHGPQGTTFTLV 120 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRL-----ELEEPLIFAGDYNIIPQPH 161 K +R + +++ + + + + GD+NI+ Sbjct: 121 SAYLHSGELRTEKQKQKIAYLHRVGERVQQLSARAMAGVGSDTPQEALICGDFNIVRTAR 180 Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNM----------GFTDAIRATHDTHHLYSFWDYY 211 D N N ++ +F DT Y++W + Sbjct: 181 DIKNWKSNHNKTSGVMDEEIAFLDAWMADTLSGSKGLPCVDVGRALVGDTDGPYTWWSWR 240 Query: 212 ADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 ++ N G R+D+ M +P SA + P + +DH PV V+ D P Sbjct: 241 GKAYDNNAGWRLDYHMATPGLAGQAQSAAVYRAPAYDARFTDHAPVTVTYDFPA 294 >gi|311276364|ref|XP_003135157.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase 2-like [Sus scrofa] Length = 515 Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats. Identities = 58/334 (17%), Positives = 106/334 (31%), Gaps = 60/334 (17%) Query: 3 VVTVATWNVNSIRARIHN-------------LAAWIKENNPDIICLQETKTEDKNF--PF 47 ++ V +WN+N IR+ + + + + + DI+CLQETK P Sbjct: 1 MLRVVSWNINGIRSHLQGAGYEEPSNCTARAVGRILDKLDADIVCLQETKVTRDVLTEPL 60 Query: 48 ETLQSLN-YHIETCGQKSYNGVAILSKYQPIEI------------------VTHLPGDDL 88 ++ N Y + + Y+GVA K + + Sbjct: 61 AIIEGYNSYFSFSRNRSGYSGVATFCKDSATPVAAEEGLSGLLATLNGDVNCYGNMDEFT 120 Query: 89 DVQ------------ARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 + + T + ++L + N+Y PH +P + K+ + Sbjct: 121 QEELRALDSEGRALLTQHKIRTQDGDEKSLTVINVYCPHADPGKPERLTFKMRFYHLLQI 180 Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYN----PIIWENDACFTLEVRQSFQKLQNMGFT 192 A L +I GD N +P D ++ E+ ++ S + Q Sbjct: 181 RAEALLAAGSHVIILGDLNTAHRPIDHWDAVNLECFEEDPGRKWMDGLLSNLRCQAGSHM 240 Query: 193 DAIR-----ATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA-TSLLHSARIDTKPR 246 ++ W + N G RID+++ S+ + + Sbjct: 241 GPFIDSYRYFQPKQKGAFTCWSTVTGARHLNYGSRIDYVLGDRALVMDTFQSSFVLPEVM 300 Query: 247 GWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 G SDH PV L++ KQ P Sbjct: 301 G----SDHCPVGAVLNVSPVPAKQCPPLCTRFLP 330 >gi|298253361|ref|ZP_06977153.1| exonuclease III [Gardnerella vaginalis 5-1] gi|297532756|gb|EFH71642.1| exonuclease III [Gardnerella vaginalis 5-1] Length = 288 Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats. Identities = 64/288 (22%), Positives = 101/288 (35%), Gaps = 27/288 (9%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNF-PFETLQSLNYHI--- 57 ++T+ T N+N IRA + W + PD+ C+QE + P T + Y Sbjct: 1 MITITTSNLNGIRAAERKGMLNWSDAHTPDVWCMQEVRAPQDAIDPIMTKIEMGYRTSEN 60 Query: 58 --------------ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR--FIEATFTI 101 E C K GVA+++ +E LPG DV + T Sbjct: 61 IVNSIKNDNFTYTNEVCRVKGRAGVALVTSLPVVEKRYGLPGLSEDVDSGRWVETDVRTP 120 Query: 102 NTQTLRIGNLYLPHGNPIT----STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII 157 + I ++Y+ GN K+ + + R + I GD+NI Sbjct: 121 EGYEITIASVYVHAGNVDDPQKMQQKFRFLDTMLIRLGELRNIAASGGNQAILCGDFNIA 180 Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSW 215 D N E A F E R + N + D Y++W ++ Sbjct: 181 HTSLDIKNAKANEKSAGFLPEERAYIDRWINEYEFVDVMRMLAGDIQGPYTWWSQRGKAF 240 Query: 216 SKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 N G R+D+ +PE ID + SDH P+ + D+ Sbjct: 241 DNNVGWRLDYQFATPEIAESARGFVIDRAESYDARWSDHAPLSIKYDV 288 >gi|290559315|gb|EFD92650.1| exodeoxyribonuclease III [Candidatus Parvarchaeum acidophilus ARMAN-5] Length = 251 Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats. Identities = 65/263 (24%), Positives = 113/263 (42%), Gaps = 16/263 (6%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDI---ICLQETKTEDKNFPFETLQSLNYHIETC 60 + + +WNVN +++ I KE DI I +QETKT ++ Y+I Sbjct: 1 MKIMSWNVNGLKSVIRK-NEIQKELESDIYGAILIQETKT-NEIIDTLGKDYFKYYISAT 58 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GV SK +P+ ++ + + D + R + F I + ++ Sbjct: 59 SKKGYSGVMTFSKNKPLNVIYGIKNEQFDREGRTLTLEFK---DYFLINAYFPNSRRDLS 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 Y K + + Q L ++P+I GD+N+ D P + +A FT R Sbjct: 116 RLDYKIKF---NKSILKFMQALRRKKPVIIGGDFNVAHNEIDIARPKSNQGNAGFTSVER 172 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD-SWSKNKGIRIDHIMLSPEATSLLHSA 239 + ++ G+ D R + + Y++W Y + + N G RID++ +S E + A Sbjct: 173 KFIDEMIKKGYIDTFRIFNKENGNYTWWTYLYKSARTNNIGWRIDYLFVSNELKKRVKDA 232 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 I G SDH PV + L+ Sbjct: 233 GIIKNKIG----SDHAPVYIELN 251 >gi|297242738|ref|ZP_06926676.1| exonuclease III [Gardnerella vaginalis AMD] gi|296888949|gb|EFH27683.1| exonuclease III [Gardnerella vaginalis AMD] Length = 288 Score = 146 bits (368), Expect = 4e-33, Method: Composition-based stats. Identities = 64/288 (22%), Positives = 101/288 (35%), Gaps = 27/288 (9%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNF-PFETLQSLNYHI--- 57 ++T+ T N+N IRA + W + PD+ C+QE + P T + Y Sbjct: 1 MITITTSNLNGIRAAERKGMLNWSDAHTPDVWCMQEVRAPQDAIDPIMTKIEMGYRTSEN 60 Query: 58 --------------ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR--FIEATFTI 101 E C K GVA+++ +E LPG DV + T Sbjct: 61 IVNSIKNDNFTYTNEVCRVKGRAGVALVTSLPVVEKRYGLPGLSEDVDSGRWVETDVRTP 120 Query: 102 NTQTLRIGNLYLPHGNPITSTK----YDDKISWIKRFLRFASQRLELEEPLIFAGDYNII 157 + + I ++Y+ GN K + + + R I GD+NI Sbjct: 121 DGYEITIASVYVHAGNVDDPQKMKQKFRFLDTMLTRLGELRDAAASGGNQAILCGDFNIA 180 Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSW 215 D N E A F E R + N + D Y++W ++ Sbjct: 181 HTSLDIKNAKANEKSAGFLPEERAYIDRWINEYEFVDVMRMLAGDIQGPYTWWSQRGKAF 240 Query: 216 SKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 N G R+D+ +PE ID + SDH P+ + D+ Sbjct: 241 DNNVGWRLDYQFATPEIAESARGFVIDRAESYDARWSDHAPLSIKYDV 288 >gi|227489312|ref|ZP_03919628.1| possible exodeoxyribonuclease III, exonuclease III [Corynebacterium glucuronolyticum ATCC 51867] gi|227090685|gb|EEI25997.1| possible exodeoxyribonuclease III, exonuclease III [Corynebacterium glucuronolyticum ATCC 51867] Length = 233 Score = 146 bits (367), Expect = 4e-33, Method: Composition-based stats. Identities = 70/259 (27%), Positives = 114/259 (44%), Gaps = 26/259 (10%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS RAR + + ++ D++ LQETK ++ FP Y + G Sbjct: 1 MRIATWNVNSARARFGRITELLARHDIDVLALQETKIKE--FP----PVKGYEVAHVGYN 54 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVAILS+ ++ T G + A + RI ++Y+P+G + Sbjct: 55 QWNGVAILSRVGLKDVQTSFTGQPDYEGKKEGRAISAVCGGK-RIWSIYVPNGRAVDHPH 113 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 YD K+ ++ F R+A+ + GD+N+IP P D Y+ +E E Sbjct: 114 YDYKLRFLYNFARYAAPGA-----DLAMGDFNVIPGPEDVYDESPFETHVT-EPERAAFE 167 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + Y++WDY A + +++G+RID + + S +D Sbjct: 168 YLTDVLPVVS--------PTGYTYWDYQARRFDRDQGMRIDFHLSTTP----ATSGFVDR 215 Query: 244 KPRGWTKPSDHTPVIVSLD 262 R K SDH PVI + Sbjct: 216 AERAA-KSSDHAPVICEYE 233 >gi|296395160|ref|YP_003660044.1| exodeoxyribonuclease III Xth [Segniliparus rotundus DSM 44985] gi|296182307|gb|ADG99213.1| exodeoxyribonuclease III Xth [Segniliparus rotundus DSM 44985] Length = 267 Score = 146 bits (367), Expect = 5e-33, Method: Composition-based stats. Identities = 58/269 (21%), Positives = 92/269 (34%), Gaps = 19/269 (7%) Query: 7 ATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTED----KNFPFETLQSLNY 55 AT NVN +RA + L W+ D +CLQE + + Sbjct: 2 ATVNVNGVRAAVKARSAANTGLLGWLSAAPADYVCLQEVRATEPETRAALAPALADGWTL 61 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 QK +GVAILS+ +P + R+IEA F L + +LYLP Sbjct: 62 VQAPAAQKGRSGVAILSRREPDAVRIGHGDPQFAESGRYIEADFG----KLTLASLYLPS 117 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 G T + + F + + ++ GD+NI D N + F Sbjct: 118 GEAQTERQVEKDQFLTT-FGEYLKPLAHAKRDVLICGDWNIAHTELDIKNWKGNLKASGF 176 Query: 176 TLEVRQSFQKLQN---MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 R ++ YS+W Y ++ + G RID+ + + Sbjct: 177 LPHERAWIGEVFADGSGWTDVQRAFHPGEAGPYSWWSYRGQAFDNDAGWRIDYHVANKPL 236 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + A + SDH P++V Sbjct: 237 AARAVKAVTQRAEHYELRWSDHAPIVVEY 265 >gi|304390853|ref|ZP_07372805.1| exodeoxyribonuclease III [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|304325736|gb|EFL92982.1| exodeoxyribonuclease III [Mobiluncus curtisii subsp. curtisii ATCC 35241] Length = 294 Score = 146 bits (367), Expect = 5e-33, Method: Composition-based stats. Identities = 55/294 (18%), Positives = 105/294 (35%), Gaps = 32/294 (10%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + V T NVN +RA W++ ++ D++CLQE + ++ + + H+ C Sbjct: 1 MKVTTVNVNGVRAAFRKGFGDWLENDDSDLLCLQEVRATPQDTQDLFGPAWDVHVWPCRV 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG------ 116 K GVA+ ++ + L + +++ ++ P G Sbjct: 61 KGRAGVALGARRDSDWEIGQLTEGLPPDLYAEVGGEPDVDSGRWLEAAIHGPQGTTFTLV 120 Query: 117 ------NPITSTKYDDKISWIKRFLRFASQ---------RLELEEPLIFAGDYNIIPQPH 161 + + K + KI+++ R Q + + + GD+NI+ Sbjct: 121 SAYLHSGELRTEKQEQKIAYLHRVGERVQQLSARAIAGVGSDTPQEALICGDFNIVRTAR 180 Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNM----------GFTDAIRATHDTHHLYSFWDYY 211 D N N ++ +F DT Y++W + Sbjct: 181 DIKNWKPNHNKTSGVMDEEIAFLDAWMADTLSGSKGLPCVDVGRALVGDTDGPYTWWSWR 240 Query: 212 ADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 ++ N G R+D+ M +P SA + P + +DH PV V+ D P Sbjct: 241 GKAYDNNAGWRLDYHMATPGLAGQAQSAAVYRAPAYDARFTDHAPVTVTYDFPA 294 >gi|121603084|ref|YP_980413.1| exodeoxyribonuclease III Xth [Polaromonas naphthalenivorans CJ2] gi|120592053|gb|ABM35492.1| exodeoxyribonuclease III Xth [Polaromonas naphthalenivorans CJ2] Length = 319 Score = 145 bits (366), Expect = 5e-33, Method: Composition-based stats. Identities = 67/321 (20%), Positives = 118/321 (36%), Gaps = 64/321 (19%) Query: 3 VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFP--FETLQSLNYHIET 59 + + + N+N IR A L W+ ++ PD IC+QE K + + FE + + + Sbjct: 1 MFKLTSLNLNGIRSAASKGLQEWVAQSMPDCICVQELKAQAADLSGRFEAIAGHKGYFQF 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT----LRIGNLYLPH 115 +K Y+GV I ++++P +++ + D + R++E F + L I + Y P Sbjct: 61 AEKKGYSGVGIYTRHEPSDVIVGYGSTEFDAEGRYVELRFDRPGRRHSPKLSIISCYFPS 120 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIF--AGDYNIIPQPHDCYNPIIWENDA 173 G+ + + + A+ + + F GD NI Q D N + ++ Sbjct: 121 GSSGEERQAAKFRFLAELYPHLAALKRCGGDNREFVLCGDINIAHQEIDLKNFKGNKKNS 180 Query: 174 CFTLEVRQSFQK------------------------------------------------ 185 F E R + Sbjct: 181 GFLPEERAWMTELLAPTLPTACGSLPPEGAAAPAARQSRLRGPGLQEASAAVDAAPALDS 240 Query: 186 -LQNMGFTDAIRATHD--THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 Q G D R H T Y++W +++KN G R+D+ + +P + HSA I Sbjct: 241 SAQGGGMVDVYRRLHPATTDEAYTWWSNRGQAYAKNVGWRLDYHLATPGFGATAHSASIH 300 Query: 243 TKPRGWTKPSDHTPVIVSLDI 263 R SDH P+ + D Sbjct: 301 KAQR----FSDHAPLTIEYDW 317 >gi|226359829|ref|YP_002777607.1| exodeoxyribonuclease [Rhodococcus opacus B4] gi|226238314|dbj|BAH48662.1| putative exodeoxyribonuclease [Rhodococcus opacus B4] Length = 304 Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats. Identities = 57/303 (18%), Positives = 101/303 (33%), Gaps = 44/303 (14%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +AT+N+N IRA W+ + PD++ LQE + P + + Sbjct: 1 MRIATFNINGIRAAQRRGFEEWLGDRAPDVVSLQEVRARAAAIPSGVFGRYHLAYDEGEF 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLD-----------------------VQARFIEATF 99 NGVAIL+++ P+ + T + Sbjct: 61 AGRNGVAILTRHAPLAVRTWSGTALVQAPGETHLERVELDPQPLARGLGEFANHGRYIEV 120 Query: 100 TINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL--------------- 144 + + + ++YLP G + ++ +++ Sbjct: 121 DLADAPITVVSMYLPKGGLPAHLQKPGRMRDAPDGGARYDRKMRFLSAFARQLTRSRRTA 180 Query: 145 ---EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT 201 L+ GD NI HD N + E R+ F + + + H Sbjct: 181 RARGRELLLMGDLNIAHTRHDVRNWRRSNQAEGYLPEEREWFDSIVSPRTLVDVVRRHHP 240 Query: 202 --HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 YS+W + S+ + G RID+ + +P +A D P + SDH PV+V Sbjct: 241 GVDGPYSWWSWLGQSFVNDVGWRIDYHLATPHLARAAVTAGTDRDPAADRRMSDHAPVVV 300 Query: 260 SLD 262 D Sbjct: 301 DYD 303 >gi|58337957|ref|YP_194542.1| exodeoxyribonuclease [Lactobacillus acidophilus NCFM] gi|227902875|ref|ZP_04020680.1| exodeoxyribonuclease [Lactobacillus acidophilus ATCC 4796] gi|58255274|gb|AAV43511.1| exodeoxyribonuclease [Lactobacillus acidophilus NCFM] gi|227869391|gb|EEJ76812.1| exodeoxyribonuclease [Lactobacillus acidophilus ATCC 4796] Length = 253 Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats. Identities = 61/261 (23%), Positives = 108/261 (41%), Gaps = 12/261 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN R + H + +PDI +Q+T+ K + + Y + Sbjct: 1 MKFVSWNVNGFRRCLRHGFLDTFLDLDPDIFGMQDTRLSPKEVKIDLTEYYQY-WNFSEE 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G A+ +K +P+ + + + D + R I F + G + Sbjct: 60 KRYDGAAVFTKIKPLAVYNGIGIPEFDREGRTITLEFPKFY---YVNTFAPYAGEQLQRL 116 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + R L +P+I GD ++ D P +N A FT + R+ Sbjct: 117 DFRVMWAQAFRNYVTK---LANNKPVIIGGDMSVAHDEIDLAEPEKNKNHAGFTGDERKE 173 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F +L N GF D R H Y++W + ++ KN G R+D+ ++S T + + I Sbjct: 174 FTELLNAGFEDTFRTLHPKDEAYTYWSRHDNARDKNIGERLDYFLVSHALTDKVEGSDIL 233 Query: 243 TKPRGWTKPSDHTPVIVSLDI 263 SDH P+ +++DI Sbjct: 234 NNIDE----SDHCPIELNMDI 250 >gi|227540901|ref|ZP_03970950.1| possible exodeoxyribonuclease III [Corynebacterium glucuronolyticum ATCC 51866] gi|227183161|gb|EEI64133.1| possible exodeoxyribonuclease III [Corynebacterium glucuronolyticum ATCC 51866] Length = 233 Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats. Identities = 71/259 (27%), Positives = 113/259 (43%), Gaps = 26/259 (10%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNS RAR + + ++ D++ LQETK ++ FP Y + G Sbjct: 1 MRIATWNVNSARARFGRITELLARHDIDVLALQETKIKE--FP----PVKGYEVAHVGYN 54 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGVAILS+ ++ T G + A + RI NLY+P+G + Sbjct: 55 QWNGVAILSRVGLKDVQTSFTGQPDYEGKKEGRAISAVCGGK-RIWNLYVPNGRAVDHPH 113 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 YD K+ ++ F R+A+ + GD+N+IP D Y+ +E E Sbjct: 114 YDYKLRFLYNFARYAAPSA-----DLAMGDFNVIPGAEDVYDESPFETHVT-EPERAAFE 167 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + Y++WDY A + +++G+RID + + S +D Sbjct: 168 YLTDVLPVVS--------PTGYTYWDYQARRFDRDQGMRIDFHLSTTP----ATSGFVDR 215 Query: 244 KPRGWTKPSDHTPVIVSLD 262 R K SDH PVI + Sbjct: 216 AERAA-KSSDHAPVICEYE 233 >gi|315656371|ref|ZP_07909260.1| exodeoxyribonuclease III [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|315492930|gb|EFU82532.1| exodeoxyribonuclease III [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 294 Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats. Identities = 51/294 (17%), Positives = 96/294 (32%), Gaps = 32/294 (10%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + V T NVN +RA W++ ++ D++CLQE + ++ + + H+ C Sbjct: 1 MKVTTVNVNGVRAAFRKGFGDWLENDDSDLLCLQEVRATPQDTQDLFGPAWDVHVWPCRV 60 Query: 63 KSYNGVAILSKYQPIE----------------IVTHLPGDDLDVQARFIEATFTINTQTL 106 K GVA+ ++ + D I + Sbjct: 61 KGRAGVALGARRDSDWEIGQLTEGLPPDLYAEVGGEPDVDSGRWLEAAIHGPQGTTFTLV 120 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRL-----ELEEPLIFAGDYNIIPQPH 161 K +R + +++ + + + + GD+NI+ Sbjct: 121 SAYLHSGELRTEKQEQKIAYLHRVGERVQQLSARAMAGAGSDTPQEALICGDFNIVRTAR 180 Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNM----------GFTDAIRATHDTHHLYSFWDYY 211 D N N ++ +F DT Y++W + Sbjct: 181 DIKNWKPNHNKTSGVMDEEIAFLDAWMADTLSGSKRLPCVDVGRALAGDTDGPYTWWSWR 240 Query: 212 ADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 ++ N G R+D+ M +P SA + P + +DH PV V+ D P Sbjct: 241 GKAYDNNAGWRLDYHMATPGLAGQAQSAAVYRAPAYDARFTDHAPVTVTYDFPA 294 >gi|229817407|ref|ZP_04447689.1| hypothetical protein BIFANG_02669 [Bifidobacterium angulatum DSM 20098] gi|229785196|gb|EEP21310.1| hypothetical protein BIFANG_02669 [Bifidobacterium angulatum DSM 20098] Length = 297 Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats. Identities = 66/286 (23%), Positives = 103/286 (36%), Gaps = 25/286 (8%) Query: 1 MSVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTE----DKNFPFETLQS--- 52 MS+ T+ T NVN IRA + W ++ P++ C+QE + D F + Sbjct: 12 MSI-TITTSNVNGIRAAKRKGIETWAAQHTPNVWCMQEVRAPQSEIDPIFDEFAFEYTTA 70 Query: 53 --------LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR--FIEATFTIN 102 L+ E C K GVA+L+ LPG DV + T Sbjct: 71 GAIDSQDRLDRTNEVCRVKGRAGVALLADLDVTARRYGLPGLTQDVDSGRWIENDITTPA 130 Query: 103 TQTLRIGNLYLPHGNPITS----TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP 158 L + +Y+ GN KY + + R + + + GD+NI Sbjct: 131 GNLLTVVCVYVHAGNTDDPVKMEQKYRFLDTMLNRMGELRDEAADGGRQALLCGDFNIAH 190 Query: 159 QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSWS 216 D N E A F E R + + D Y++W ++ Sbjct: 191 TSADIKNAKANEKHAGFLPEERAYVDRWLGEYGFVDVTRRLAGDIQGPYTWWSQRGRAFD 250 Query: 217 KNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 N G R+D+ +P S ID P T+ SDH P+ ++ + Sbjct: 251 NNVGWRLDYQFATPALAETAVSFDIDKAPSYDTRWSDHAPLTITYE 296 >gi|83595869|gb|ABC25231.1| catabolite repression control protein PA5332 [uncultured marine bacterium Ant4D3] Length = 257 Score = 145 bits (365), Expect = 7e-33, Method: Composition-based stats. Identities = 65/262 (24%), Positives = 115/262 (43%), Gaps = 13/262 (4%) Query: 4 VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC-- 60 + V T NV +R A L W+ + D++CLQ+ + +D +H+ Sbjct: 1 MRVITLNVQGLRQAAERGLFDWMVTQDADVVCLQDIREKDYQLDEPLFHPEGWHVYFFDA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + Y G AI S++QP I+T L D + RFI+A F + I ++ +P G Sbjct: 61 FEDGYGGTAIYSRHQPKAIMTGLGFSGCDFEGRFIQADFE----KISIASISVPSG-LGD 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 K D K ++ +F + L IF G N +P D + + ++ F E R Sbjct: 116 DDKQDAKNEFMDQFSNHLRKTLRKRRDFIFCGTINTAHKPEDLSGWYVNQKNSGFLPEER 175 Query: 181 Q-SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + + F DA R + +++W Y ++ N+G R+D+ + +P + +A Sbjct: 176 DVLDEIFFQLEFCDAFRQVNQNERQFTWWPDYNRAFKLNEGARLDYQITTPNLRRNVRNA 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261 I + R S+H+P+I+ Sbjct: 236 GIYREQR----FSNHSPLIIDY 253 >gi|326384660|ref|ZP_08206338.1| exodeoxyribonuclease III [Gordonia neofelifaecis NRRL B-59395] gi|326196627|gb|EGD53823.1| exodeoxyribonuclease III [Gordonia neofelifaecis NRRL B-59395] Length = 291 Score = 145 bits (365), Expect = 7e-33, Method: Composition-based stats. Identities = 60/285 (21%), Positives = 104/285 (36%), Gaps = 28/285 (9%) Query: 4 VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 +TV ++NVN IRA R +W+ E +PD++ LQE + + +T Sbjct: 6 LTVVSFNVNGIRAARRRGFDSWLAERSPDVVGLQELRCPPEEV--GEFDGYTASFDTGSI 63 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDD-----LDVQARFIEATFTINTQTLRIGNLYLPHGN 117 NGVAIL+K P + T + + + ++ + + + LYLP G Sbjct: 64 PGRNGVAILTKSPPTAVRTWVTDPPKARGLREYASHGRYIEVDLSDEPVTVACLYLPKGG 123 Query: 118 PITSTKYDDKISWIKRFLRFASQRLEL------------------EEPLIFAGDYNIIPQ 159 + I +++ + GD NI Sbjct: 124 LPADLQRPGNIREKPDGGAKHLRKMTFLSGFARELDRNRLAARRAGREFLLIGDLNIAHL 183 Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA--THDTHHLYSFWDYYADSWSK 217 HD N F R+ + + + D ++W + +S++K Sbjct: 184 EHDVTNWRPARKMEGFLPMEREWLGEQLSPRRLIDVVRVLHGDRPGPLTWWSWAGESFTK 243 Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + G RIDH + SP + +D +P + SDH P++V D Sbjct: 244 DVGWRIDHQLASPGLAARARWTEVDKEPSPDVRLSDHAPLVVGYD 288 >gi|296130335|ref|YP_003637585.1| exodeoxyribonuclease III Xth [Cellulomonas flavigena DSM 20109] gi|296022150|gb|ADG75386.1| exodeoxyribonuclease III Xth [Cellulomonas flavigena DSM 20109] Length = 276 Score = 145 bits (365), Expect = 8e-33, Method: Composition-based stats. Identities = 60/271 (22%), Positives = 105/271 (38%), Gaps = 11/271 (4%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC- 60 V+TVA+ NVN IRA + W+ PD++ LQE + D+ + L +H+ Sbjct: 7 VLTVASVNVNGIRAAFRRGMGEWLDVRKPDVLLLQEVRGSDE-ILADHLPPDGWHLAHEA 65 Query: 61 -GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL-----YLP 114 K GVAI S+ + L R++EA + + R Sbjct: 66 GNAKGRAGVAIASRLPMSAVRVGLGTGVTGDAGRWVEADLEVPAEDGRPATTLTVVSAYL 125 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 H + + D+K +++ + + AGD NI + D N A Sbjct: 126 HSGTVGTPSMDEKYAFLAHVTDRLAAIAAAGGRAVVAGDLNIAHREVDIKNWKGNLTKAG 185 Query: 175 FTLEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 F E R + + + Y++W + ++ + G RID+ + +P Sbjct: 186 FLPEERAYLDRWFDELGWRDLGRDLAGPGPGPYTWWSWRGKAFDNDAGWRIDYQLATPAL 245 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +L +A +D + SDH P++V D+ Sbjct: 246 AALARTATVDRAATYDARFSDHAPLVVEYDL 276 >gi|226355160|ref|YP_002784900.1| exodeoxyribonuclease III [Deinococcus deserti VCD115] gi|226317150|gb|ACO45146.1| putative exodeoxyribonuclease III [Deinococcus deserti VCD115] Length = 260 Score = 144 bits (364), Expect = 9e-33, Method: Composition-based stats. Identities = 63/262 (24%), Positives = 109/262 (41%), Gaps = 20/262 (7%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETC 60 + V T NVN +R+ + L W+ PD++ LQE + E LQ L Y Sbjct: 12 LKVTTLNVNGLRSALRKGLRDWLLREAPDVLLLQEVRAGPM---PEALQDLGYDGAWFPA 68 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + Y+GVA+LS++ +I + L + + Q +R ++YLP G+ Sbjct: 69 QKAGYSGVAVLSRHPLRDIRAGM----LHDEMDAEGRVVSAVVQGVRFVSVYLPSGS-SG 123 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K + + + L+ + P++ GDYNI + D N ++ F R Sbjct: 124 ELRQGFKDRILDDYHTWVQALLDEQTPVVIGGDYNIAHREIDLKNWRSNRKNSGFLPHER 183 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + + G D R Y++W ++++ N G RID+ +LS + Sbjct: 184 EWMTAHLSAGLVDCHRNCLGEAAEYTWWSNRGNAYANNVGWRIDY-LLSAGV--QVRGVC 240 Query: 241 IDTKPRGWTKPSDHTPV--IVS 260 +D + R SDH P+ V Sbjct: 241 VDREAR----LSDHAPLTGWVE 258 >gi|121608588|ref|YP_996395.1| exodeoxyribonuclease III Xth [Verminephrobacter eiseniae EF01-2] gi|121553228|gb|ABM57377.1| exodeoxyribonuclease III Xth [Verminephrobacter eiseniae EF01-2] Length = 266 Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats. Identities = 62/270 (22%), Positives = 111/270 (41%), Gaps = 15/270 (5%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFP--FETLQSLNYHIET 59 + + + N+N IR+ L +W+ PD IC+QE K + + FE L L + Sbjct: 1 MFKLTSLNLNGIRSATSRGLESWLAATRPDCICVQEVKAQAADLADRFERLADLQGYFHL 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GV + ++++P + V + D + R++E F + L I + Y P G+ Sbjct: 61 AEKKGYSGVGVYTRHEPSDRVAGYGSPEFDAEGRYLELRFDTPARKLSIISAYFPSGSSG 120 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + RL E I GD NI Q D N + ++ F E Sbjct: 121 PLRQQA--KFRFLAEFHPHLMRLRAEREFILCGDINIAHQTIDLKNWRSNQKNSGFLPEE 178 Query: 180 RQSFQKLQNMGFTDAIRATHDT------HHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 R L ++ + + + Y++W +++ N G R+D+ + +P Sbjct: 179 RLWMTNLLDVNDKNGVIDVYRRLQPCATDTAYTWWSNRGRAYANNVGWRLDYHLATPALA 238 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +L + I K SDH P+ V ++ Sbjct: 239 ALARAQSIYK----GEKFSDHAPITVDYEL 264 >gi|262199576|ref|YP_003270785.1| exodeoxyribonuclease III Xth [Haliangium ochraceum DSM 14365] gi|262082923|gb|ACY18892.1| exodeoxyribonuclease III Xth [Haliangium ochraceum DSM 14365] Length = 301 Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats. Identities = 65/305 (21%), Positives = 110/305 (36%), Gaps = 41/305 (13%) Query: 1 MSVVTVATWNVNSIRARIH------------------------------NLAAWIKENNP 30 ++ V V +WNVN +RA WI+ + Sbjct: 2 LARVRVVSWNVNGLRAVDRTTPRRASAAASPSPGQVRASTGARAQRGGGRFRRWIERVDA 61 Query: 31 DIICLQETKTEDKNFPFETLQSLNYHIE--TCGQKSYNGVAILSKYQPIEIVTHLPGDDL 88 I+ +QE + P LQ +H + Y+GV + +K P T L G D Sbjct: 62 TIVGVQEVRARRDALPRRLLQPRGWHAHLVEAERAGYSGVGLYAKLAPDGADTALAGGDF 121 Query: 89 DVQARFIEATF-TINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEP 147 D + R A F ++ + +G+ +++ K+ + + + + Sbjct: 122 DREGRLQIAHFGRLSVANVYF---PNGNGSNRDNSRVPFKLDFYRALFDALGALRDAGQR 178 Query: 148 LIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF 207 ++ GD+N + D P + F E R + G+ D R Y++ Sbjct: 179 VLVMGDFNTAHRDIDLARPKQNRKTSGFLPEERAELDRWVAAGWVDTFRHFEPGPGHYTW 238 Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPR 267 W A ++N G RID++ PEA + SA + + G SDH P V LD P Sbjct: 239 WSQRAGVRARNIGWRIDYVFACPEAMPFVRSAFLMPQVGG----SDHCPHGVVLD-PAIT 293 Query: 268 KKQQD 272 + Sbjct: 294 RAAPP 298 >gi|10640846|emb|CAC12624.1| probable apurinic/apyrimidinic endonuclease [Thermoplasma acidophilum] Length = 241 Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats. Identities = 60/253 (23%), Positives = 97/253 (38%), Gaps = 14/253 (5%) Query: 12 NSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAI 70 N +RA + + K+++ I LQETK + + P E L Y++ K Sbjct: 2 NGLRAAVKNGAVSVFKQDDYFGIALQETKADSTSVPEEMYH-LGYYLYNNPAKKKGYSGT 60 Query: 71 LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISW 130 +S + I G + + + N +D Sbjct: 61 MSLVREKPIDV-SYGFENEEGRILNLEFDKFYFINVYFPNAQHGLTRLDMKLDFD----- 114 Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG 190 S L ++PLI GD+N+ + D P EN+A FT + R K + G Sbjct: 115 --EKFLEYSNELRKKKPLIICGDFNVAHEEIDIARPKDNENNAGFTKQERDWMTKFLDSG 172 Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 + D R YS+W Y ++ +KN G RID+ ++S + + A I G Sbjct: 173 YVDTYRIFMKEGGHYSWWSYRFNARAKNIGWRIDYFVVSDDIRDRVKKAEILETVTG--- 229 Query: 251 PSDHTPVIVSLDI 263 SDH PV + +D+ Sbjct: 230 -SDHAPVTLEVDL 241 >gi|315606039|ref|ZP_07881070.1| exodeoxyribonuclease III [Actinomyces sp. oral taxon 180 str. F0310] gi|315312321|gb|EFU60407.1| exodeoxyribonuclease III [Actinomyces sp. oral taxon 180 str. F0310] Length = 275 Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 52/274 (18%), Positives = 93/274 (33%), Gaps = 13/274 (4%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 +TV + N+N IRA W+ ++ D++ +QE + ++ + + C Sbjct: 2 TLTVTSVNLNGIRAAHKRGFLPWLHASDTDVLLVQEVRAPEEISREIMGEEWDSVWVPCR 61 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-------TINTQTLRIGNLYLP 114 K GV + + I D ++ + +R+ + Y Sbjct: 62 IKGRAGVGVAVRRGRARIDGEPRLVLDDAESDVDSGRWLEATVSREGGGVPVRVVSAYFH 121 Query: 115 HGNPITSTK---YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 G T + R ++ + GD+N++ D N N Sbjct: 122 SGEKDTPKQDAKMAHLPRIGNRMAELIAEEANGGVSSLVCGDFNVVRSRCDIKNWTPNHN 181 Query: 172 D--ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 E+ + + DT YS+W + ++ N G RID+ + Sbjct: 182 KRAGVLDEEIAFLNRWVDEGWRDTVRDLAGDTQGPYSWWSWRGQAFVNNAGWRIDYQYAT 241 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 P +L S I P + SDH PV V+ DI Sbjct: 242 PRLGALARSFDIGRAPDYDARFSDHAPVSVTYDI 275 >gi|260907098|ref|ZP_05915420.1| exodeoxyribonuclease III [Brevibacterium linens BL2] Length = 251 Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 47/249 (18%), Positives = 88/249 (35%), Gaps = 6/249 (2%) Query: 24 WIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHL 83 W+ PD I LQE + + + L+ Y + ++ + + + Sbjct: 4 WVDTAKPDFITLQEVRAAND-IALKVLEDTGYTTISHDAEAKGRAGVAVMARNEPVEVRE 62 Query: 84 ---PGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQ 140 D R++E + + +L H + + K +DK ++ R + Sbjct: 63 GLGTDGYFDRAGRWLETDYRLGDGSLLTLVSAYVHSGEVDTPKQEDKYRFLDRMTLRLPE 122 Query: 141 RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT-- 198 + + ++ GD N+ D N A F E R F + Sbjct: 123 LAKQADHVLITGDLNVCHTERDLKNWKANRKKAGFLPEERAYFDGFFGDVGYVDVHRDLS 182 Query: 199 HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVI 258 D Y++W ++ N G RID+ M +P A +D + SDH P++ Sbjct: 183 GDVDGPYTWWSMRGQAFDNNAGWRIDYQMATPALAKAAVKATVDKADSWAERWSDHAPLV 242 Query: 259 VSLDIPEPR 267 + D+P P+ Sbjct: 243 IDYDLPAPK 251 >gi|183602482|ref|ZP_02963848.1| possible exodeoxyribonuclease [Bifidobacterium animalis subsp. lactis HN019] gi|183218401|gb|EDT89046.1| possible exodeoxyribonuclease [Bifidobacterium animalis subsp. lactis HN019] Length = 284 Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats. Identities = 59/284 (20%), Positives = 106/284 (37%), Gaps = 24/284 (8%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPF--------------- 47 +T+ T N+N IRA W K + P++ C+QET+ + Sbjct: 1 MTITTSNLNGIRAAKRKGFDHWAKAHTPNVWCMQETRAPQEIIADIYGELAADYVHAGKI 60 Query: 48 ETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR--FIEATFTINTQT 105 + + L+ ++ C K GV ++S +E LPG + DV + T Sbjct: 61 ASPEELHTLVDVCRIKGRAGVGMISDMPVLETRVGLPGLEEDVDSGRWIEADVRTEQGYV 120 Query: 106 LRIGNLYLPHGNPITS----TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161 + + +Y+ G + KY + +R + + + GD+NI P Sbjct: 121 ITVVCVYVHAGGLVDDPKEAQKYRFLDTMTERMQQLQDEAASGGRQAVVCGDFNIAHNPI 180 Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNM--GFTDAIRATHDTHHLYSFWDYYADSWSKNK 219 D NP EN+ + R K + D Y++W ++ + Sbjct: 181 DLKNPKSNENNNGYFPRERAYMDKWIDQMDYVDVMRDLAGDIQGPYTWWSQRGRAFDNDS 240 Query: 220 GIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 G R+D+ +PE +D ++ SDH P+ +S D+ Sbjct: 241 GWRLDYQFATPELAQQARGFVVDRASSYDSRWSDHAPLTISYDV 284 >gi|85700212|gb|ABC74556.1| exonuclease III [Rhizobium leguminosarum bv. trifolii TA1] Length = 215 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 116/212 (54%), Positives = 154/212 (72%), Gaps = 1/212 (0%) Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL-RIGN 110 +L YH+ET GQK +NGVAILSK P E+ LPGD LD QARF+EA FT++ + R+ Sbjct: 1 ALGYHVETHGQKGFNGVAILSKSTPFEVNRGLPGDPLDEQARFLEAAFTLSDTRILRVCC 60 Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170 +YLP+GNP+ + KY K++W++R FA++RL E+ L+ AGDYN+IP+PHDC++P +WE Sbjct: 61 IYLPNGNPVETEKYPYKLAWMERLRTFAAERLAYEDMLVLAGDYNVIPEPHDCFDPKVWE 120 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230 NDA F + R++F+KL+N+G TDA+RAT D YSFWDY A +W KN GIRIDH++LSP Sbjct: 121 NDALFLPQTREAFRKLENLGLTDAVRATTDATQFYSFWDYQAGAWPKNNGIRIDHLLLSP 180 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 EA + SA I+ R W KPSDH PVI D Sbjct: 181 EAADRMTSAAIEKHVRAWEKPSDHVPVIAYFD 212 >gi|38233240|ref|NP_939007.1| putative exodeoxyribonuclease [Corynebacterium diphtheriae NCTC 13129] gi|38199499|emb|CAE49150.1| Putative exodeoxyribonuclease [Corynebacterium diphtheriae] Length = 301 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 57/301 (18%), Positives = 102/301 (33%), Gaps = 44/301 (14%) Query: 4 VTVATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKN----FPFETLQS 52 + + T NVN IRA + + W+++ D++ LQE + +K+ Sbjct: 1 MQITTVNVNGIRAAVKQRSDANRGMLPWLEQCGSDVVLLQEVRASEKDSLTALAPALDAG 60 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 +Y K GV ILS+ ++ L G + + + + +LY Sbjct: 61 WHYVGAPAAAKGRAGVGILSRQPLRDVQVGLEGFVDSGRYIQATLSDPDTGHDVVVASLY 120 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 LP G+ + K D+K ++ F F Q + ++ GD+NI + D N Sbjct: 121 LPSGS-ADTDKQDEKYRFLDVFGPFLEQAAQDNPHMVVGGDWNICHRMQDLKNWKTNRKK 179 Query: 173 ACFTLEVRQSFQ--------------------------------KLQNMGFTDAIRATHD 200 + F + R + + D R Sbjct: 180 SGFLPDERAFMDSVFGVFPDSESQVSDAGQWAGAVDYTSQQRRTPANDPKWFDVARRLAP 239 Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 Y++W Y ++ N G RID+ + +D + SDH+P+ V Sbjct: 240 EDAAYTWWTYRGQAFDTNAGWRIDYQAATSAMLERATRCWVDKAAAYDLRWSDHSPLTVV 299 Query: 261 L 261 Sbjct: 300 Y 300 >gi|329113350|ref|ZP_08242131.1| Exodeoxyribonuclease III [Acetobacter pomorum DM001] gi|326697175|gb|EGE48835.1| Exodeoxyribonuclease III [Acetobacter pomorum DM001] Length = 245 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 66/246 (26%), Positives = 110/246 (44%), Gaps = 6/246 (2%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKSYNGVAILSKYQPIEIVTHL 83 ++ PD++CLQETK D FP + +++L + H+ G K YNGVAILS++ + T Sbjct: 1 MQHLAPDVVCLQETKVPDPLFPEDGVKALGFEHLHYRGMKGYNGVAILSRHPLRPV-TQT 59 Query: 84 PGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLE 143 P R + AT + + + Y+P G + + K + F+ ++ + Sbjct: 60 PIWYGKEDCRHVAATVCTPEGEMELHDFYIPAGGDEPDPETNPKFAHKLAFVEEVTEWFQ 119 Query: 144 LE--EPLIFAGDYNIIPQPHDCYNPIIWENDACF-TLEVRQSFQKLQNMGFTDAIRATHD 200 + GD+NI P HD ++ E + + LQ Sbjct: 120 SRPLNRTVLVGDFNIAPLEHDVWSHKQLLKIVSHTPPETERLNRWLQTGFVDAMRHFVPP 179 Query: 201 THHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 LY++W Y W K N+G R+DH+ ++P+ LH + + R W PSDH PV+V Sbjct: 180 EEKLYTWWSYRNRDWKKSNRGRRLDHVWMTPDLLPNLHGMTVVREARDWEGPSDHVPVVV 239 Query: 260 SLDIPE 265 + + Sbjct: 240 DFSLSD 245 >gi|225020579|ref|ZP_03709771.1| hypothetical protein CORMATOL_00586 [Corynebacterium matruchotii ATCC 33806] gi|224946525|gb|EEG27734.1| hypothetical protein CORMATOL_00586 [Corynebacterium matruchotii ATCC 33806] Length = 299 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 56/297 (18%), Positives = 101/297 (34%), Gaps = 42/297 (14%) Query: 4 VTVATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKNFPFETLQSL--N 54 + + T NVN IRA W+ + PD++ LQET+ D +L Sbjct: 1 MQITTINVNGIRAATKIRSSTNRGFLPWLFDVAPDVVLLQETRATDAESRTALAPALDAG 60 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 +H + + + + + + R+I+ T+ + I +LYLP Sbjct: 61 WHFYSAPSIRKGHAGVGILSRRELVDVRVGLAGFEDVGRYIQGTYPDEDGDVIIASLYLP 120 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 G + S K D+K ++ F + S ++ GD+NI + D N ++ Sbjct: 121 VGG-VGSEKQDEKYEFLDAFDQVISDAAIQNSHMVIGGDWNICHREQDLKNYQANRKNSG 179 Query: 175 FTLEVRQSFQKLQNMG--------------------------------FTDAIRATHDTH 202 + R + + D R H Sbjct: 180 CLPDERAFMDHMFGTYPDSQSQVVGAGEWYGAVNYRSKKRRKAPKTPQWYDVARRLHPDD 239 Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 Y++W Y ++ + G RID+ + + R+D + SDH P+ V Sbjct: 240 APYTWWTYRGRAFGNDAGWRIDYQAATKSMFERATTMRVDKAVDHAARWSDHAPLTV 296 >gi|145355749|ref|XP_001422113.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144582353|gb|ABP00430.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 273 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 56/273 (20%), Positives = 101/273 (36%), Gaps = 21/273 (7%) Query: 4 VTVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTEDK---NFPFE-----TLQ 51 ++V +WNVN +R+ + L + + D++ LQETK E L+ Sbjct: 1 LSVVSWNVNGLRSLLKKAPRALDELARRTDADVLVLQETKLGADGRGAVDGEGEAPKFLR 60 Query: 52 SLNY--HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 + + +K Y+G A+ + + + L E Sbjct: 61 EYGTREYATSTARKGYSGTAMFIRDGDWAKMKRVEATRLSAGGFDDEGRVLTAELDSCFV 120 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLE-LEEPLIFAGDYNIIPQPHDCYNPI- 167 + + +++ +R +R + LE + +I+ GD N+ + D + Sbjct: 121 VNAYVPNSGADLKRLPERVEVWERAIREHVRALESRGKAVIYCGDLNVAHEEIDLWGRHA 180 Query: 168 IWENDACFTLEVRQSFQKLQNMG-FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226 A FT E R + +L D RA +++W Y A + KN+G R+D+I Sbjct: 181 ENSKSAGFTPEERAAMTRLLEECDLVDTFRAHRPDARAFTYWSYRAGAREKNRGWRLDYI 240 Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 + S + A G SDH PV + Sbjct: 241 LASRRLADSIVDAYALPDVLG----SDHCPVGL 269 >gi|227541836|ref|ZP_03971885.1| possible exodeoxyribonuclease III [Corynebacterium glucuronolyticum ATCC 51866] gi|227182279|gb|EEI63251.1| possible exodeoxyribonuclease III [Corynebacterium glucuronolyticum ATCC 51866] Length = 294 Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats. Identities = 63/300 (21%), Positives = 104/300 (34%), Gaps = 47/300 (15%) Query: 1 MSVVTVATWNVNSIRARI---HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL--NY 55 MS +A+ NVN IRA W++ + DI+ LQE + + +L + Sbjct: 1 MSH-KIASVNVNGIRAAASKSPGFHDWLRTADVDIVLLQEVRATPEQAEKALAPALAEGW 59 Query: 56 HI--ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 H+ K GVAIL+ ++ T +PG + D + +L + Sbjct: 60 HLTLHDSAAKGRAGVAILTTRPVTDVRTGVPGFE-DSGRFVSALVDDLFVASLYLPT--- 115 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + K D+K ++ + E + AGD+NI P+D N + A Sbjct: 116 ---GSAGTAKQDEKYRFLDSLEVVLADIAAKHEKAVVAGDWNICHAPNDLKNFNSNKKKA 172 Query: 174 CFTLEVRQSFQKLQ--------------------------------NMGFTDAIRATHDT 201 + R + + + D R H Sbjct: 173 GCLPDERAFMDSVFGTFPFEESQVESHGRFAGAVDYVREGRREASTSPQWFDVARRLHPE 232 Query: 202 HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 Y++W Y ++ N G RID + S R+D T+ SDH P++VS Sbjct: 233 DAPYTWWTYRGKAFDTNAGWRIDVQAATKAMLERAESTRVDRADEWGTRWSDHAPLVVSY 292 >gi|305679776|ref|ZP_07402586.1| putative exodeoxyribonuclease III [Corynebacterium matruchotii ATCC 14266] gi|305660396|gb|EFM49893.1| putative exodeoxyribonuclease III [Corynebacterium matruchotii ATCC 14266] Length = 299 Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats. Identities = 63/299 (21%), Positives = 110/299 (36%), Gaps = 46/299 (15%) Query: 4 VTVATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKN----FPFETLQS 52 + + T NVN IRA W+ + PD++ LQET+ D Sbjct: 1 MQITTINVNGIRAATKIRSSTNRGFLPWLFDVAPDVVLLQETRATDAESRTALAPALDAG 60 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 +++ +K + GV ILS+ + I++ L G + R+I+ T+ + + I +LY Sbjct: 61 WHFYSAPSIRKGHAGVGILSRRELIDVRVGLAG--FEDVGRYIQGTYPDDGDDVIIASLY 118 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 LP G S K D+K ++ F + S ++ GD+NI + D N + Sbjct: 119 LPVGG-AGSEKQDEKYEFLDAFDQVISDTEIQNSHMVIGGDWNICHREQDLKNYQANRKN 177 Query: 173 ACFTLEVRQSFQKLQNMG--------------------------------FTDAIRATHD 200 + + R + + D R H Sbjct: 178 SGCLPDERAFMDHMFGTYPDSQSQVVGAGEWYGAVNYRSKKRRQAPKTPQWYDVARRLHP 237 Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 Y++W Y ++ + G RID+ + + R+D + SDH P+ V Sbjct: 238 DDAPYTWWTYRGRAFGNDAGWRIDYQAATKSMFERATTMRVDKAVDHAARWSDHAPLTV 296 >gi|281206753|gb|EFA80938.1| hypothetical protein PPL_06173 [Polysphondylium pallidum PN500] Length = 2081 Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats. Identities = 64/275 (23%), Positives = 106/275 (38%), Gaps = 23/275 (8%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETL-QSLNYHIETCG 61 + + +WNV + A++++ PDI+CLQETK P + + + YH C Sbjct: 1250 LKIMSWNVAGFNSCTKKGFKAYVEQEQPDILCLQETKILPSKVPKDAIPKGYEYHFSACR 1309 Query: 62 --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT---QTLRIGNLYLPHG 116 + V IL + + + + + I T + + N Y+P+ Sbjct: 1310 KTWIPWYWVRILLLFDFLLTKVKPISVTMGMGVGKHDKEGRIITAEYEKFYLVNTYVPNS 1369 Query: 117 NPITSTKY---DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 T D + L L ++P+I+ GD N+ + D NP A Sbjct: 1370 GVDRKTPLARLDYRTKEWDVDLFKYMHELNKKKPVIWTGDLNVAHKEIDLKNPKGNVRTA 1429 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHH-LYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 FT+E R SF GF D R + Y+FW Y +S + N G R+D+ ++ Sbjct: 1430 GFTVEERTSFSGFLESGFVDTFRHFNPKKEFQYTFWSYMRNSRASNAGWRLDYFIVPLTF 1489 Query: 233 TSLLHSARIDTKPRGWTKPSD-------H-TPVIV 259 + + I R SD H P+I+ Sbjct: 1490 IGSVAHSFI----RSKVTGSDCLFIRYTHSYPIIL 1520 >gi|227874670|ref|ZP_03992832.1| possible exodeoxyribonuclease III [Mobiluncus mulieris ATCC 35243] gi|269976389|ref|ZP_06183379.1| exodeoxyribonuclease III [Mobiluncus mulieris 28-1] gi|227844743|gb|EEJ54890.1| possible exodeoxyribonuclease III [Mobiluncus mulieris ATCC 35243] gi|269935410|gb|EEZ91954.1| exodeoxyribonuclease III [Mobiluncus mulieris 28-1] Length = 294 Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats. Identities = 55/294 (18%), Positives = 95/294 (32%), Gaps = 32/294 (10%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + V T NVN +RA W++ ++ D++CLQE + ++ + + H+ C Sbjct: 1 MKVTTVNVNGVRAAFRKGFGDWLENDDSDLLCLQEVRATPQDTQDLFGPAWDVHVWPCRV 60 Query: 63 KSYNGVAILSKYQPIE-IVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 K GVA+ ++ I G D+ A + + L Sbjct: 61 KGRAGVALGARRDSDWEIGQLTEGLPPDLYAEVGGEPDVDSGRWLEAAIHEPQGTTFTLV 120 Query: 122 TKYDDKISWIKRFLRFASQRLEL--------------------EEPLIFAGDYNIIPQPH 161 + Y L + + GD+NI+ Sbjct: 121 SAYLHSGELRTEKQEQKIAFLHRVGERVQQLSARAMAGAGSDTPQEALICGDFNIVRTAR 180 Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNM----------GFTDAIRATHDTHHLYSFWDYY 211 D N N ++ +F DT Y++W + Sbjct: 181 DIKNWKPNHNKTSGVMDEEIAFLDAWMADTLSGSKRLPCVDVGRALAGDTDGPYTWWSWR 240 Query: 212 ADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 ++ N G R+D+ M +P SA + P + +DH PV V+ D PE Sbjct: 241 GKAYDNNAGWRLDYHMATPGLAGQAQSAAVYRAPAYDARFTDHAPVTVAYDFPE 294 >gi|145511051|ref|XP_001441453.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124408703|emb|CAK74056.1| unnamed protein product [Paramecium tetraurelia] Length = 374 Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats. Identities = 73/276 (26%), Positives = 117/276 (42%), Gaps = 25/276 (9%) Query: 4 VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETL------QSLNY 55 + +++WN+N +RA + + +++ + N DIICL E K + F E L Y Sbjct: 105 LKISSWNINGLRASSKKESAVSYLNDKNFDIICLNELKVAQEAFEKENLITKLPKDYFAY 164 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + Y+GVAILSK +PI I + + D + R I A F + Sbjct: 165 LNFCKIKAGYSGVAILSKVKPISIKYDMGIEKHDQEGRIITAEFEKFN---LVACYVPNS 221 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA-- 173 G+ + + + + +L+ + I GD N+ D NP + A Sbjct: 222 GDKLDR--LNYRTQEWDVDFQNYLDKLKQTKNTIICGDLNVSHTEIDLANPEGNKRSAGQ 279 Query: 174 ------CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227 FT E R SF K + G+ D R H YS++ +S NKG RID+ + Sbjct: 280 LIIYDQRFTQEERDSFSKFLSKGWIDTFRHLHPKEIKYSYFSPRFNSRETNKGWRIDYFV 339 Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 ++ EA + + I T G SDH P+ +D+ Sbjct: 340 VNQEAVGSVIQSDIKTTILG----SDHVPIECDIDL 371 >gi|227487001|ref|ZP_03917317.1| possible exodeoxyribonuclease III [Corynebacterium glucuronolyticum ATCC 51867] gi|227093075|gb|EEI28387.1| possible exodeoxyribonuclease III [Corynebacterium glucuronolyticum ATCC 51867] Length = 294 Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats. Identities = 61/300 (20%), Positives = 103/300 (34%), Gaps = 47/300 (15%) Query: 1 MSVVTVATWNVNSIRARI---HNLAAWIKENNPDIICLQETKTEDKN----FPFETLQSL 53 MS +A+ NVN IRA W++ + DI+ LQE + + + Sbjct: 1 MSH-KIASINVNGIRAAASKSPGFHDWLRTADVDIVLLQEVRATPEQAQKALAPALAEGW 59 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 N + QK GVAIL+ +++ +PG + D + +L + Sbjct: 60 NLTLSDSAQKGRAGVAILTTQPVVDVHMGVPGFE-DSGRFVSALVDDLFVASLYLPT--- 115 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + K D+K ++ + E + AGD+NI P+D N + A Sbjct: 116 ---GSAGTAKQDEKYRFLDSLEVVLADIAAKHEKAVVAGDWNICHAPNDLKNFNSNKKKA 172 Query: 174 CFTLEVRQSFQKLQ--------------------------------NMGFTDAIRATHDT 201 + R + + + D R H Sbjct: 173 GCLPDERAFMDSVFGTFPFEESQVESHGRFAGAVDYVREGRREASTSPQWFDVARRLHPE 232 Query: 202 HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 Y++W Y ++ N G RID + S R+D T+ SDH P++V+ Sbjct: 233 DAPYTWWTYRGKAFDTNAGWRIDVQAATKAMMERAESTRVDRADEWGTRWSDHAPLVVTY 292 >gi|255074455|ref|XP_002500902.1| predicted protein [Micromonas sp. RCC299] gi|226516165|gb|ACO62160.1| predicted protein [Micromonas sp. RCC299] Length = 301 Score = 143 bits (359), Expect = 4e-32, Method: Composition-based stats. Identities = 63/282 (22%), Positives = 109/282 (38%), Gaps = 22/282 (7%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKE----NNPDIICLQETKTEDKNFPFET---LQSLN 54 S +TV +WNVNSIRA + + E + D++ LQETK ++K+ P L Sbjct: 24 SKLTVLSWNVNSIRALLDKDPDILDEVAASEDADVVLLQETKLQEKHVPEMDARVLAKYP 83 Query: 55 YHIETCGQKS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 Y C Y+G A+ + +P H P + + + + + Sbjct: 84 YRTWNCSTSRLGYSGTAMFLRLEPTRAPWHDPFEMDEFEGEGRVVCAELPNVFVVGAYCP 143 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII-WEN 171 + + Q +P+++ GD N+ +P D + Sbjct: 144 NSGEGLARLRARTKEWDPRMSAYLSSLQASAGGKPVVYCGDLNVANEPIDLWGNHAANSL 203 Query: 172 DACFTLEVRQSFQKLQNMGFTDAI--------RATHDTHHLYSFWDYYADSWSKNKGIRI 223 + +T E R SF++L D A ++++ Y A + +N+G RI Sbjct: 204 ASGYTPEERDSFKRLLLGPIRDGGAGLVDTFREAHGTDAKAFTYFSYRAGARPRNRGWRI 263 Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 D+ ++S +H A I RG SDH P+ V + + E Sbjct: 264 DYALVSESLRGEVHDAFI----RGDVGGSDHCPIGVVVKLRE 301 >gi|330812595|ref|YP_004357057.1| catabolite repression control protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380703|gb|AEA72053.1| catabolite repression control protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 259 Score = 143 bits (359), Expect = 4e-32, Method: Composition-based stats. Identities = 69/264 (26%), Positives = 112/264 (42%), Gaps = 13/264 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + + NVN I+A + L +W++ N D+ICLQ+T+ Q Y + C Sbjct: 1 MRIISVNVNGIQAAVERGLLSWLQAQNADVICLQDTRASAFELDDAAFQLDGYFLYACDA 60 Query: 62 -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + GVA+ S+ QP ++ L + D R+++A F + I L LP G Sbjct: 61 EVPAQGGVALYSRLQPKAVINGLGFETADRYGRYLQADFD----KVSIATLLLPSGQN-G 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF-TLEV 179 + K + F R+ ++ I+ G + Q D N + F E Sbjct: 116 DEDLNQKFKLMDDFARYLDKQRRKRREYIYCGSLYVAQQKLDIKNWRDSQQSPGFLAPER 175 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + + NMG+ DA+R YS+W + N G R D+ +L+P + SA Sbjct: 176 AWMDEIIGNMGYVDALREVSREGDQYSWWPDNEQAEMLNLGWRFDYQLLTPGLRRFVRSA 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 R+ +PR S H P+IV D Sbjct: 236 RLPRQPR----FSQHAPLIVDYDW 255 >gi|320334708|ref|YP_004171419.1| exodeoxyribonuclease III Xth [Deinococcus maricopensis DSM 21211] gi|319755997|gb|ADV67754.1| exodeoxyribonuclease III Xth [Deinococcus maricopensis DSM 21211] Length = 267 Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats. Identities = 63/258 (24%), Positives = 107/258 (41%), Gaps = 19/258 (7%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 V + T NVN +R+ + L W+ + PD++ LQE + + E + L Y Sbjct: 12 VRITTLNVNGLRSALRKGLREWVVTHAPDVLLLQEVRADPM---PEAFEDLGYASAWHPA 68 Query: 62 -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + Y+GVAILS+ ++ + + T +R+ ++YLP G+ Sbjct: 69 VKPGYSGVAILSRRGLEDVRVGM----GLADVDVEGRVLSAVTDGVRVASVYLPSGS-SG 123 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K + + + L L + GDYN+ Q D N ++ F R Sbjct: 124 EVRQGFKDRVLPLYHAWVESLLPLGPL-VIGGDYNVAHQNVDIRNWRGNLKNSGFLPHER 182 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + G TDA RA Y++W ++++ + G RID+++ S A L R Sbjct: 183 AWMTQHLAAGLTDAHRARLGERAEYTWWSNRGNAYANDVGWRIDYLLTSGVA---LREVR 239 Query: 241 IDTKPRGWTKPSDHTPVI 258 +D R SDH P+ Sbjct: 240 VDRSVR----LSDHAPLT 253 >gi|311739953|ref|ZP_07713787.1| possible exodeoxyribonuclease III [Corynebacterium pseudogenitalium ATCC 33035] gi|311305026|gb|EFQ81095.1| possible exodeoxyribonuclease III [Corynebacterium pseudogenitalium ATCC 33035] Length = 305 Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats. Identities = 55/304 (18%), Positives = 99/304 (32%), Gaps = 46/304 (15%) Query: 3 VVTVATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKNFPFETLQSL-- 53 +T+A+ NVN IRA + AW++E DI+ +QE + + +L Sbjct: 2 TLTIASVNVNGIRAACKQRNENNPGMNAWLEETPADIVLMQEVRATPEQAEKALAPALEA 61 Query: 54 NYHIE--TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 +H+ K GV ILS+ ++ + T I +L + + Sbjct: 62 GWHLALADAAAKGRAGVGILSRTPLADVEVGFGSFTDAGRW-IAATTRDIRVASLYLPSG 120 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 ++ D+ + + ++ GD+NI + D N E Sbjct: 121 DTGSPKLDEKYRFLDEFQEVLAENAAHTNSDGSPADMVIGGDWNICHRAQDLKNNKANEK 180 Query: 172 DACFTLEVRQSFQKLQ---------------------------------NMGFTDAIRAT 198 A E R + + D R Sbjct: 181 KAGHLPEERAFMDHVFGAFPDDKPQEKKNLGQWQGVVEYAGGEPWSPAAEPQWFDVARRL 240 Query: 199 HDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257 H Y++W Y +++ N G RID+ ++ +D P + SDH+P+ Sbjct: 241 HPEEDGPYTWWTYRGQAFNNNAGWRIDYQAVTRPMLERAQRTWVDKAPTVEQRWSDHSPL 300 Query: 258 IVSL 261 +V Sbjct: 301 LVEY 304 >gi|325283015|ref|YP_004255556.1| exodeoxyribonuclease III Xth [Deinococcus proteolyticus MRP] gi|324314824|gb|ADY25939.1| exodeoxyribonuclease III Xth [Deinococcus proteolyticus MRP] Length = 264 Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats. Identities = 60/259 (23%), Positives = 105/259 (40%), Gaps = 19/259 (7%) Query: 4 VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 +TV T N+N +R AR L W+ + PD++ LQE + E L++L YH Sbjct: 15 LTVTTLNLNGLRSARRKGLEDWLTRHAPDVLLLQEVRAPAM---PEVLEALGYHSAWHPA 71 Query: 63 KS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + Y+GVAI S+ ++ + + +R ++YLP G+ Sbjct: 72 QKAGYSGVAIASRLPLQDVRLGM----GHEAMDAEGRLISAQVAGVRFASVYLPSGS-SG 126 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K + + + ++ + GDYNI QP D N +N++ F R Sbjct: 127 EVRQSFKDRLLLDYQIWTDRQRTQGPL-VIGGDYNIAHQPIDLKNWRSNQNNSGFLPHER 185 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + G +D+ R Y++W +++ + G RID+++ S Sbjct: 186 EWMTAHLASGLSDSHRLHLGERAEYTWWSNRGQAYTNDTGWRIDYLLTSQV---QTADVW 242 Query: 241 IDTKPRGWTKPSDHTPVIV 259 +D R SDH P+ Sbjct: 243 VDRPAR----LSDHAPLTA 257 >gi|324515683|gb|ADY46281.1| Recombination repair protein 1 [Ascaris suum] Length = 378 Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats. Identities = 62/265 (23%), Positives = 110/265 (41%), Gaps = 15/265 (5%) Query: 4 VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTED--KNFPFETLQSLNYHIETC 60 +T+ TWNV +RA + +I + DI+ LQETK + FP + ++ + E Sbjct: 124 LTIITWNVAGLRALVKKDACRFITSDKADIVLLQETKCAEVPTGFPVKGFKA--FVGENP 181 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 G+ + GV +LSK +PI++ T L + + N Y+P+ Sbjct: 182 GKTGHAGVILLSKQKPIKVQTKLENVP--EELGVEGRLIVAEYDKFYLINAYVPNSGRGL 239 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA--CFTLE 178 KI F ++L+ + +I+AGD N+ + D NP N E Sbjct: 240 VNLAKRKIWD--DFFIDYIKQLDASKAVIYAGDLNVAHEEIDLANPKTNRNKTAGFTDQE 297 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 + LQ D Y+FW ++ + N G R+D+ ++S + Sbjct: 298 RGDFTRLLQAGFVDVYRSLHPDKTGAYTFWSTMHNARATNIGWRLDYFVVSERLMDKVVK 357 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263 I+++ G SDH P+ + +++ Sbjct: 358 CEINSRVMG----SDHCPLTLQINL 378 >gi|62389560|ref|YP_224962.1| exodeoxyribonuclease [Corynebacterium glutamicum ATCC 13032] gi|41324894|emb|CAF19376.1| PUTATIVE EXODEOXYRIBONUCLEASE [Corynebacterium glutamicum ATCC 13032] Length = 319 Score = 142 bits (357), Expect = 6e-32, Method: Composition-based stats. Identities = 57/296 (19%), Positives = 103/296 (34%), Gaps = 45/296 (15%) Query: 6 VATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKN----FPFETLQSLN 54 + + NVN IRA + W++E PD++ LQE + +K+ + Sbjct: 20 ITSVNVNGIRAAVKQRSETNLGFLPWLEETRPDVVLLQEVRASEKDTATALQPALDNGWH 79 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 Y K GV ILS+++ ++ + T + + +LYLP Sbjct: 80 YIGAPAAAKGRAGVGILSRHELEDVNIGFGSFLDSGRYIEATIKDTTLDVPVTVASLYLP 139 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 G+ + K D+K ++ F F QR + ++ GD+NI + D N + + Sbjct: 140 SGS-AGTDKQDEKYRFLDEFEGFLDQRAKERSHMVIGGDWNICHRREDLKNWKTNQKKSG 198 Query: 175 FTLEVRQSFQKLQN---------------------------------MGFTDAIRATHDT 201 F + R + F A R + Sbjct: 199 FLPDERAFMDSVFGTFPDEATQVAGAGDFFGAVDYEGTRRREATTDPAWFDVARRLQPEG 258 Query: 202 HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257 Y++W Y ++ G RID+ + + +D + SDH+P+ Sbjct: 259 DGPYTWWTYRGKAFDTGAGWRIDYQAATAAMLERAERSWVDKAAAYDLRWSDHSPL 314 >gi|219683204|ref|YP_002469587.1| exodeoxyribonuclease [Bifidobacterium animalis subsp. lactis AD011] gi|241191164|ref|YP_002968558.1| exodeoxyribonuclease [Bifidobacterium animalis subsp. lactis Bl-04] gi|241196570|ref|YP_002970125.1| exodeoxyribonuclease [Bifidobacterium animalis subsp. lactis DSM 10140] gi|219620854|gb|ACL29011.1| possible exodeoxyribonuclease [Bifidobacterium animalis subsp. lactis AD011] gi|240249556|gb|ACS46496.1| exodeoxyribonuclease [Bifidobacterium animalis subsp. lactis Bl-04] gi|240251124|gb|ACS48063.1| exodeoxyribonuclease [Bifidobacterium animalis subsp. lactis DSM 10140] gi|289177272|gb|ADC84518.1| Exodeoxyribonuclease III [Bifidobacterium animalis subsp. lactis BB-12] gi|295794157|gb|ADG33692.1| exodeoxyribonuclease [Bifidobacterium animalis subsp. lactis V9] Length = 286 Score = 142 bits (357), Expect = 6e-32, Method: Composition-based stats. Identities = 59/284 (20%), Positives = 106/284 (37%), Gaps = 24/284 (8%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPF--------------- 47 +T+ T N+N IRA W K + P++ C+QET+ + Sbjct: 3 LTITTSNLNGIRAAKRKGFDHWAKAHTPNVWCMQETRAPQEIIADIYGELAADYVHAGKI 62 Query: 48 ETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR--FIEATFTINTQT 105 + + L+ ++ C K GV ++S +E LPG + DV + T Sbjct: 63 ASPEELHTLVDVCRIKGRAGVGMISDMPVLETRVGLPGLEEDVDSGRWIEADVRTEQGYV 122 Query: 106 LRIGNLYLPHGNPITS----TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161 + + +Y+ G + KY + +R + + + GD+NI P Sbjct: 123 ITVVCVYVHAGGLVDDPKEAQKYRFLDTMTERMQQLQDEAASGGRQAVVCGDFNIAHNPI 182 Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNM--GFTDAIRATHDTHHLYSFWDYYADSWSKNK 219 D NP EN+ + R K + D Y++W ++ + Sbjct: 183 DLKNPKSNENNNGYFPRERAYMDKWIDQMDYVDVMRDLAGDIQGPYTWWSQRGRAFDNDS 242 Query: 220 GIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 G R+D+ +PE +D ++ SDH P+ +S D+ Sbjct: 243 GWRLDYQFATPELAQQARGFVVDRASSYDSRWSDHAPLTISYDV 286 >gi|255323939|ref|ZP_05365065.1| exodeoxyribonuclease III [Corynebacterium tuberculostearicum SK141] gi|255299119|gb|EET78410.1| exodeoxyribonuclease III [Corynebacterium tuberculostearicum SK141] Length = 305 Score = 142 bits (357), Expect = 7e-32, Method: Composition-based stats. Identities = 55/304 (18%), Positives = 98/304 (32%), Gaps = 46/304 (15%) Query: 3 VVTVATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKNFPFETLQSL-- 53 +T+A+ NVN IRA + AW++E DI+ +QE + + +L Sbjct: 2 TLTIASVNVNGIRAACKQRNENNPGMNAWLEETPADIVLMQEVRATPEQAEKALAPALEA 61 Query: 54 NYHIE--TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 +H+ K GV ILS+ ++ + T I +L + + Sbjct: 62 GWHLALADAAAKGRAGVGILSRTPLADVEVGFGSFTDAGRW-IAATTRDIRVASLYLPSG 120 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 ++ D+ + + ++ GD+NI + D N E Sbjct: 121 DTGSPKLDEKYRFLDEFQEVLAENAARTNSDGSPADMVIGGDWNICHRAQDLKNNKANEK 180 Query: 172 DACFTLEVRQSFQKLQ---------------------------------NMGFTDAIRAT 198 A E R + + D R Sbjct: 181 KAGHLPEERAFMDHVFGAFPDDKPQEKKNLGQWQGVVEYAGGEPWAPAAEPQWFDVARRL 240 Query: 199 HDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257 H Y++W Y +++ N G RID+ + +D P + SDH+P+ Sbjct: 241 HPEEDGPYTWWTYRGQAFNNNAGWRIDYQAATRPMLERAQRTWVDKAPTVEQRWSDHSPL 300 Query: 258 IVSL 261 +V Sbjct: 301 LVEY 304 >gi|229593354|ref|YP_002875473.1| putative exodeoxyribonuclease III [Pseudomonas fluorescens SBW25] gi|50660344|gb|AAT80896.1| catabolite repression control protein [Pseudomonas fluorescens] gi|229365220|emb|CAY53517.1| putative exodeoxyribonuclease III [Pseudomonas fluorescens SBW25] Length = 259 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 69/264 (26%), Positives = 113/264 (42%), Gaps = 13/264 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + + NVN I+A + L +W++ N D+ICLQ+T+ Q Y + C Sbjct: 1 MRIISVNVNGIQAAVERGLLSWLQAQNADVICLQDTRASAFELDDPAFQLDGYFLYACDA 60 Query: 62 -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + GVA+ S+ QP +++ L + D R+++A F + I L LP G Sbjct: 61 EVPTQGGVALYSRLQPKAVISGLGFETADRYGRYLQADFD----KVSIATLLLPSGQN-G 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF-TLEV 179 + K + F R+ ++ I+ G + Q D N + F E Sbjct: 116 DEDLNQKFKLMDDFARYLDKQRRKRREYIYCGSLYVAQQKLDIKNWRDSQQSPGFLAPER 175 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + + NMG+ DA+R YS+W + N G R D+ +L+P + SA Sbjct: 176 AWMDEIVGNMGYVDALREVSREGDQYSWWPDNEQAEMLNLGWRFDYQLLTPGLRRFVRSA 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 R+ +PR S H P+IV D Sbjct: 236 RLPRQPR----FSQHAPLIVDYDW 255 >gi|312963856|ref|ZP_07778327.1| exodeoxyribonuclease III [Pseudomonas fluorescens WH6] gi|311281891|gb|EFQ60501.1| exodeoxyribonuclease III [Pseudomonas fluorescens WH6] Length = 259 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 69/264 (26%), Positives = 113/264 (42%), Gaps = 13/264 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + + NVN I+A + L +W++ N D+ICLQ+T+ Q Y + C Sbjct: 1 MRIISVNVNGIQAAVERGLLSWLQAQNADVICLQDTRASAFELDDPAFQLDGYFLYACDA 60 Query: 62 -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + GVA+ S+ QP +++ L + D R+++A F + I L LP G Sbjct: 61 EVPAQGGVALYSRLQPKAVISGLGFETADRYGRYLQADFD----KVSIATLLLPSGQN-G 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF-TLEV 179 + K + F R+ ++ I+ G + Q D N + F E Sbjct: 116 DEDLNQKFKLMDDFARYLDKQRRKRREYIYCGSLYVAQQKLDIKNWRDSQQSPGFLAPER 175 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + + NMG+ DA+R YS+W + N G R D+ +L+P + SA Sbjct: 176 AWMDEIVGNMGYVDALREVSREGDQYSWWPDNEQAEMLNLGWRFDYQLLTPGLRRFVRSA 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 R+ +PR S H P+IV D Sbjct: 236 RLPRQPR----FSQHAPLIVDYDW 255 >gi|298345652|ref|YP_003718339.1| exodeoxyribonuclease III [Mobiluncus curtisii ATCC 43063] gi|298235713|gb|ADI66845.1| exodeoxyribonuclease III [Mobiluncus curtisii ATCC 43063] Length = 269 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 59/269 (21%), Positives = 108/269 (40%), Gaps = 27/269 (10%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80 + A+++ N D++ +QE K + FP ++ Y + G +NGVA+ ++ + Sbjct: 1 MTAFLERENIDVLAMQEIKCRNDQFPTLAFETAGYQVFVNGLNQWNGVAVAARQGISAHL 60 Query: 81 THLPGDDLDVQARFIEATFT---------INTQTLRIGNLYLPHGNPITSTKYDDKISWI 131 Q F + + +LY+P+G + Y K+ W+ Sbjct: 61 LGTEFYGAIDQPYFSVPPKPPQLEPRVLGVRVAGVECWSLYVPNGREVGHLHYQYKLKWL 120 Query: 132 KRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNM 189 + L+ + + + GD+N+ P+ D ++ + + RQ F KL + Sbjct: 121 DSLRSHVIRTLDTDPESLGLYLGDFNVAPRDEDVWDLADFAAATHVSEPERQVFAKLLDP 180 Query: 190 GFTDAIRATHD----------------THHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 HD +++WDY W +N+G++ID + +P Sbjct: 181 DTVADAVTLHDDLIGGLPGNLTEITRKFAPGWTYWDYQRARWRRNQGMKIDFALATPRLV 240 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 S + A IDT R +PSDH PVIV + Sbjct: 241 SRVTGAYIDTAERDGEQPSDHAPVIVDFE 269 >gi|283456347|ref|YP_003360911.1| exodeoxyribonuclease III [Bifidobacterium dentium Bd1] gi|283102981|gb|ADB10087.1| xth Exodeoxyribonuclease III [Bifidobacterium dentium Bd1] Length = 277 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 65/277 (23%), Positives = 94/277 (33%), Gaps = 26/277 (9%) Query: 12 NSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI------------- 57 N IRA + W N PDI C+QE + + Sbjct: 2 NGIRAAKRKGIEIWAGRNTPDIWCMQEVRAPQHEIDP-IFDEFGFEYSTAGKIADQSELD 60 Query: 58 ---ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR--FIEATFTINTQTLRIGNLY 112 E C K GV +LS I+ LPG D DV + T + + +Y Sbjct: 61 RLNEVCRIKGRAGVGLLSALPVIDKRYGLPGLDDDVDSGRWIEADVKTPQGYIVTVVCVY 120 Query: 113 LPHGNPITS----TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168 + GN KY + ++R + + + GD+NI P D N Sbjct: 121 VHAGNTDDPAKMEQKYRFLDTMLERMGQLRDEAAHGGRQSVLCGDFNIAHTPLDIKNAKA 180 Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSWSKNKGIRIDHI 226 E A F E R K + D Y++W ++ N G RID+ Sbjct: 181 NETHAGFLPEERAYVDKWLGELEFVDVMRNLAGDIQGPYTWWSQRGRAFDNNVGWRIDYQ 240 Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +PE ID P + SDH P+ ++ DI Sbjct: 241 FATPELAESACGFVIDKAPTYDKRWSDHAPLTITYDI 277 >gi|70733340|ref|YP_263115.1| exodeoxyribonuclease III [Pseudomonas fluorescens Pf-5] gi|68347639|gb|AAY95245.1| exodeoxyribonuclease III, putative [Pseudomonas fluorescens Pf-5] Length = 259 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 69/264 (26%), Positives = 113/264 (42%), Gaps = 13/264 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + + NVN I+A + L +W++ N D+ICLQ+T+ Q Y + C Sbjct: 1 MRIISVNVNGIQAAVERGLLSWLQAQNADVICLQDTRASAFELDDPAFQLDGYFLYACDA 60 Query: 62 -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + GVA+ S+ QP +++ L + D R+++A F + I L LP G Sbjct: 61 EVPAQGGVALYSRLQPKAVISGLGFETADRYGRYLQADFD----KVSIATLLLPSGQN-G 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF-TLEV 179 + K + F R+ ++ I+ G + Q D N + F E Sbjct: 116 DEDLNQKFKLMDDFARYLDKQRRKRREYIYCGSLYVAQQKLDIKNWRDSQQSPGFLAPER 175 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + + NMG+ DA+R YS+W + N G R D+ +L+P + SA Sbjct: 176 AWMDEIIGNMGYVDALREVSREGDQYSWWPDNEQAEMLNLGWRFDYQLLTPGLRRFVRSA 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 R+ +PR S H P+IV D Sbjct: 236 RLPRQPR----FSQHAPLIVDYDW 255 >gi|148544535|ref|YP_001271905.1| exodeoxyribonuclease III Xth [Lactobacillus reuteri DSM 20016] gi|184153898|ref|YP_001842239.1| exodeoxyribonuclease III [Lactobacillus reuteri JCM 1112] gi|227363037|ref|ZP_03847174.1| exodeoxyribonuclease III Xth [Lactobacillus reuteri MM2-3] gi|325682856|ref|ZP_08162372.1| exodeoxyribonuclease III [Lactobacillus reuteri MM4-1A] gi|148531569|gb|ABQ83568.1| exodeoxyribonuclease III Xth [Lactobacillus reuteri DSM 20016] gi|183225242|dbj|BAG25759.1| exodeoxyribonuclease III [Lactobacillus reuteri JCM 1112] gi|227071921|gb|EEI10207.1| exodeoxyribonuclease III Xth [Lactobacillus reuteri MM2-3] gi|324977206|gb|EGC14157.1| exodeoxyribonuclease III [Lactobacillus reuteri MM4-1A] Length = 253 Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats. Identities = 67/258 (25%), Positives = 106/258 (41%), Gaps = 13/258 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +W+VN +++ I H K + D CLQ T+ + P + Y + Sbjct: 1 MKFISWSVNGLKSAINHGFVEDFKRQDADFFCLQRTRLDKGEEPIQIPNYYQY-WNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +KY+P ++ + D + R I + I G + Sbjct: 60 KGYSGTAIFTKYKPENVIYGMNNSIFDKEGRLITLEYP---NFYLIDVYVPVSGEKLQHL 116 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 Y R L+ +P+I GD +I QP D P + A FT + R Sbjct: 117 DYR---LDWDRAFLDYVINLQSSKPVIIGGDMSIAYQPIDLAEPTENHHKAGFTKQERAD 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F KL N G TD R H H Y++W Y D+ +N G R+D+ ++S + A+I Sbjct: 174 FGKLLNAGLTDTFRYLHPNLHGAYTWWSYRYDARERNVGWRLDYFLVSDVWKERIEEAKI 233 Query: 242 DTKPRGWTKPSDHTPVIV 259 + K S H P+ + Sbjct: 234 LSDV----KGSSHCPIEL 247 >gi|124265282|ref|YP_001019286.1| DNA-(apurinic or apyrimidinic site) lyase [Methylibium petroleiphilum PM1] gi|124258057|gb|ABM93051.1| DNA-(apurinic or apyrimidinic site) lyase [Methylibium petroleiphilum PM1] Length = 263 Score = 141 bits (354), Expect = 1e-31, Method: Composition-based stats. Identities = 60/268 (22%), Positives = 112/268 (41%), Gaps = 12/268 (4%) Query: 3 VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNF--PFETLQSLNYHIET 59 ++ + + N+N IR A W +++ D + +QE K + + F+ + L H Sbjct: 1 MLRLVSLNLNGIRSAANKGWVEWAEKSAIDCMGVQELKAQAADLGGRFDQVAGLKGHFHY 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y+GV + ++ P +++T + + D + R++EA F + L I + Y P G+ Sbjct: 61 ADKKGYSGVGLYTRGTPSDVITGIGEPEFDAEGRYVEARFDTPQRKLSIISCYFPSGSSS 120 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + + L+ I GD NI + D N + ++ F E Sbjct: 121 DERQQA--KFRFLALFYPYLELLKATREFILVGDVNIAHREIDLKNWKSNQKNSGFLPEE 178 Query: 180 RQSFQKLQNMGFTDAIRA---THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 R + + + DT Y++W +W+ N G RID+ + +P +L Sbjct: 179 RAWMSRALDELGLVDVHRTLRPDDTGEAYTWWSNRGQAWANNVGWRIDYHLATPALAALA 238 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDIP 264 SA + R SDH P+ V ++ Sbjct: 239 RSASVYKAQR----FSDHAPLTVDYELS 262 >gi|19551901|ref|NP_599903.1| exonuclease III [Corynebacterium glutamicum ATCC 13032] gi|21323437|dbj|BAB98064.1| Exonuclease III [Corynebacterium glutamicum ATCC 13032] Length = 304 Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats. Identities = 57/296 (19%), Positives = 103/296 (34%), Gaps = 45/296 (15%) Query: 6 VATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKN----FPFETLQSLN 54 + + NVN IRA + W++E PD++ LQE + +K+ + Sbjct: 5 ITSVNVNGIRAAVKQRSETNLGFLPWLEETRPDVVLLQEVRASEKDTATALQPALDNGWH 64 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 Y K GV ILS+++ ++ + T + + +LYLP Sbjct: 65 YIGAPAAAKGRAGVGILSRHELEDVNIGFGSFLDSGRYIEATIKDTTLDVPVTVASLYLP 124 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 G+ + K D+K ++ F F QR + ++ GD+NI + D N + + Sbjct: 125 SGS-AGTDKQDEKYRFLDEFEGFLDQRAKERSHMVIGGDWNICHRREDLKNWKTNQKKSG 183 Query: 175 FTLEVRQSFQKLQN---------------------------------MGFTDAIRATHDT 201 F + R + F A R + Sbjct: 184 FLPDERAFMDSVFGTFPDEATQVAGAGDFFGAVDYEGTRRREATTDPAWFDVARRLQPEG 243 Query: 202 HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257 Y++W Y ++ G RID+ + + +D + SDH+P+ Sbjct: 244 DGPYTWWTYRGKAFDTGAGWRIDYQAATAAMLERAERSWVDKAAAYDLRWSDHSPL 299 >gi|28493652|ref|NP_787813.1| exodeoxyribonuclease [Tropheryma whipplei str. Twist] gi|28572845|ref|NP_789625.1| exodeoxyribonuclease [Tropheryma whipplei TW08/27] gi|28410978|emb|CAD67363.1| putative exodeoxyribonuclease [Tropheryma whipplei TW08/27] gi|28476694|gb|AAO44782.1| putative exodeoxyribonuclease [Tropheryma whipplei str. Twist] Length = 281 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 64/285 (22%), Positives = 112/285 (39%), Gaps = 30/285 (10%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ VA+ NVN IRA + W+KE NPDI+ +QE + ++ + L + N + C Sbjct: 1 MLEVASVNVNGIRAAHRKGMDLWLKERNPDILTIQEVRAQESDL-RGILPNWNISFDPCS 59 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGD-----------DLDVQARFIEATFTINTQTLRIGN 110 GVAI SK+ PI + T L + L+ R+IEA + I + + + + Sbjct: 60 IPGRAGVAIASKFPPIAVRTKLRANKILNPETASEEPLNTSGRWIEADYDIAGKLVTVVS 119 Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170 Y+ G T + + + + + L EE + GD+N+ D N Sbjct: 120 CYVYAGEARTIKQEE--KMAFLQAVEKRMKSLVKEEFALVTGDFNVGHTTLDIKNWRGNL 177 Query: 171 NDACFTLEVR-------------QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK 217 + + F E R + + Y++W +++ Sbjct: 178 DKSGFLPEERAYLDALVGNESDKEYNAGAGQGWIDVVRKIKGGIDGPYTWWSMRGNAFDN 237 Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + G RID+ + ID + + +DH PV+V D Sbjct: 238 DTGWRIDYQFATQRL--KALWVAIDRQKSYAQRWTDHAPVVVKYD 280 >gi|79610414|ref|NP_974691.2| endonuclease/exonuclease/phosphatase family protein [Arabidopsis thaliana] Length = 610 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 53/352 (15%), Positives = 94/352 (26%), Gaps = 74/352 (21%) Query: 4 VTVATWNVNSIRARIHNL---AAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 + + T+NVN +R R+ + + DIIC QETK + + + Y Sbjct: 1 MKIVTYNVNGLRQRVSQFDSLLKLLDSFDADIICFQETKLRRQELTADLAIADGYESFFS 60 Query: 61 GQK-----------------------------------------SYNGVAILSKYQPIEI 79 + + N S+ + Sbjct: 61 CTRTSEKGRTGYSGVATFCRVKSASSSCETALPVTAEEGITGLVNSNSRGGKSETSTVAE 120 Query: 80 VTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFAS 139 + + + + N+Y P + + + K + R Sbjct: 121 GLEEYEKEELLMIDQEGRCVITDHGHFVVFNVYGPRAVADDADRIEFKHRFYGVLERRWE 180 Query: 140 QRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH 199 L + GD NI P D F R + Sbjct: 181 CLLRQGRRVFVVGDLNIAPFAMDRCEAGPDFEKNEFRKWFRSLLVERGGSFSDVFRSKHP 240 Query: 200 DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE-------------ATSLLHSARIDTK-- 244 + ++ W + + N G RIDHI+++ + I T+ Sbjct: 241 ERKDAFTCWSSSSGAEQFNYGSRIDHILVAGSCLHQDEDKQGHSFLACHVKECDILTEYK 300 Query: 245 -------PRGWT-------KPSDHTPVIVSL-DIPEPRKKQQDSTSQNMKPI 281 P W K SDH PV +S D+P+ + + P+ Sbjct: 301 RFKNENMPTRWKGGLVTKFKGSDHVPVFISFDDLPDIPEHSTPPLASRYLPM 352 >gi|25027245|ref|NP_737299.1| putative exodeoxyribonuclease [Corynebacterium efficiens YS-314] gi|259506618|ref|ZP_05749520.1| exodeoxyribonuclease [Corynebacterium efficiens YS-314] gi|23492526|dbj|BAC17499.1| putative exodeoxyribonuclease [Corynebacterium efficiens YS-314] gi|259165816|gb|EEW50370.1| exodeoxyribonuclease [Corynebacterium efficiens YS-314] Length = 331 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 56/297 (18%), Positives = 102/297 (34%), Gaps = 46/297 (15%) Query: 6 VATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKN----FPFETLQSLN 54 + T NVN IRA + W++E+ D++ LQE + +K+ + Sbjct: 31 ITTVNVNGIRAAVKERSETNLGFIPWLEESGSDVVLLQEVRASEKDTEKALQPALEAGWH 90 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 Y K GV ILS++ ++ + T + + +LYLP Sbjct: 91 YVGAPAAAKGRAGVGILSRHALSDVSIGFGSFLDSGRYIQASIADTTLGVPVTVASLYLP 150 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 G+ + K D+K ++ F ++R ++ GD+NI + D N + + Sbjct: 151 SGS-AGTDKQDEKYHFLDEFSEVLAERAATHPHMVIGGDWNICHRREDLKNWKTNQKKSG 209 Query: 175 FTLEVRQSFQKLQNM----------------------------------GFTDAIRATHD 200 F + R + F A R + Sbjct: 210 FLPDERAWMDSVFGCFPDEQSQVVGGGDFFGAVDYVGTAGRREANPDPAWFDVARRLQPE 269 Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257 Y++W Y ++ N G RID+ + + +D + SDH+P+ Sbjct: 270 GDGPYTWWTYRGKAFDTNAGWRIDYQAATKSMCERAERSWVDKAAAYDLRWSDHSPL 326 >gi|170077908|ref|YP_001734546.1| exodeoxyribonuclease III [Synechococcus sp. PCC 7002] gi|169885577|gb|ACA99290.1| exodeoxyribonuclease III [Synechococcus sp. PCC 7002] Length = 224 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 71/223 (31%), Positives = 114/223 (51%), Gaps = 4/223 (1%) Query: 42 DKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLP---GDDLDVQARFIEAT 98 D +FP + ++L YH GQKSYNGVA+LS+ +++ G + + Sbjct: 3 DPDFPRQPFEALGYHTSISGQKSYNGVALLSREPLQDVIIGFTPVVGAAIAQDFDAQKRV 62 Query: 99 FTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP 158 + +R+ NLY+P+G+ + S KYD K+ W + + + + + ++ GD+NI Sbjct: 63 ISGVIGDVRVVNLYVPNGSAVGSEKYDYKLGWFEVLKAYLKELCKDDREILMCGDFNIAL 122 Query: 159 QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN 218 + D Y + + R++ + + GF D R + +S+WDY +S+N Sbjct: 123 EDRDIY-MPKKPDHIMASPAERETLTAILDFGFQDVFRKFNQEADQFSWWDYRTRGFSRN 181 Query: 219 KGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +G RIDHI L+ + ID +PRGW KPSDHTPVIV L Sbjct: 182 RGWRIDHIYLTEKLYGQAKRCWIDREPRGWEKPSDHTPVIVEL 224 >gi|196014285|ref|XP_002117002.1| hypothetical protein TRIADDRAFT_60990 [Trichoplax adhaerens] gi|190580493|gb|EDV20576.1| hypothetical protein TRIADDRAFT_60990 [Trichoplax adhaerens] Length = 281 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 63/262 (24%), Positives = 101/262 (38%), Gaps = 50/262 (19%) Query: 5 TVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFET-LQSLNYHIETCGQ 62 + +WNVN I+A N +++ ++N DIICLQETK + P E L + + + Q Sbjct: 67 KITSWNVNGIKAWFKKNGHSYLTDSNIDIICLQETKCAESEIPNEIKLDGYHTYFYSAEQ 126 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+ +LSK +P+++ + L ++ R + + Sbjct: 127 KGYSSTGLLSKVKPLKVTFGITNIILHIKFRTDIEKHDKEGRVITAEYDKFFLVGAYL-- 184 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 NP A FT E R+ Sbjct: 185 -----------------------------------------ANPKTNTKTAGFTKEEREG 203 Query: 183 FQKLQNMGFTDAIRATHDTHH-LYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F KL + GF D R + YSFW Y +++ SKN G R+D+ + S + + I Sbjct: 204 FGKLLDCGFIDTFRHFYPNKTSAYSFWSYMSNARSKNIGWRLDYFVTSKNLIPNVADSII 263 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 ++ G SDH P+ + L I Sbjct: 264 RSEIEG----SDHCPIELLLQI 281 >gi|241745915|ref|XP_002405543.1| ap endonuclease, putative [Ixodes scapularis] gi|215505857|gb|EEC15351.1| ap endonuclease, putative [Ixodes scapularis] Length = 507 Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats. Identities = 59/315 (18%), Positives = 99/315 (31%), Gaps = 42/315 (13%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + +WN+N +R+ + + E + DIIC QETK + Y + Sbjct: 1 MKLVSWNINGLRSFKAGVKGLLAELDADIICFQETKATRDVLEETSAIVEGYSAFFSFPR 60 Query: 64 SYNGVA----------------------ILSKYQPIEIVTHLPGDDLDVQA--------- 92 +G + S P + + D D + Sbjct: 61 YQSGYSGVATFCKDAFRPFAAEEGLTELWTSSGCPDSVGFYGDTSDFDSKNISSVDGEGR 120 Query: 93 ---RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLI 149 + + + N+Y P +P + K+ + + R A L +I Sbjct: 121 TVLTLHHVRCGDKLKRIAVINVYCPRADPEKPERGQIKLDFYELLKRRAMTLLRNGLEVI 180 Query: 150 FAGDYNIIPQPHDCYNPIIWENDACFTLEVR---QSFQKLQNMGFTDAIRATHDT-HHLY 205 GD N + D +P E+ + N F D R H T + Sbjct: 181 ILGDLNTSHRKIDHCDPSDDEDFDSNPGRIWLSQFLENSTTNTCFHDTYRRLHPTTEKAF 240 Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 + W+ + N G RID+++ SP L +A I G SDH PV Sbjct: 241 TCWNTRLGARQTNYGTRIDYVLCSPALVPFLQTADILPHVLG----SDHCPVEAIFRCDG 296 Query: 266 PRKKQQDSTSQNMKP 280 + S + P Sbjct: 297 VPSPRCPSMATKFWP 311 >gi|15600525|ref|NP_254019.1| catabolite repression control protein [Pseudomonas aeruginosa PAO1] gi|107104434|ref|ZP_01368352.1| hypothetical protein PaerPA_01005511 [Pseudomonas aeruginosa PACS2] gi|116053479|ref|YP_793806.1| catabolite repression control protein [Pseudomonas aeruginosa UCBPP-PA14] gi|218894435|ref|YP_002443305.1| catabolite repression control protein [Pseudomonas aeruginosa LESB58] gi|254237974|ref|ZP_04931297.1| catabolite repression control protein [Pseudomonas aeruginosa C3719] gi|254243782|ref|ZP_04937104.1| catabolite repression control protein [Pseudomonas aeruginosa 2192] gi|296392192|ref|ZP_06881667.1| exodeoxyribonuclease III Xth [Pseudomonas aeruginosa PAb1] gi|9951651|gb|AAG08717.1|AE004946_1 catabolite repression control protein [Pseudomonas aeruginosa PAO1] gi|1079662|gb|AAC44428.1| catabolite repression control protein [Pseudomonas aeruginosa PAO1] gi|115588700|gb|ABJ14715.1| catabolite repression control protein [Pseudomonas aeruginosa UCBPP-PA14] gi|126169905|gb|EAZ55416.1| catabolite repression control protein [Pseudomonas aeruginosa C3719] gi|126197160|gb|EAZ61223.1| catabolite repression control protein [Pseudomonas aeruginosa 2192] gi|218774664|emb|CAW30481.1| catabolite repression control protein [Pseudomonas aeruginosa LESB58] Length = 259 Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats. Identities = 60/264 (22%), Positives = 108/264 (40%), Gaps = 13/264 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + + NVN I+A L +W++ N D+ICLQ+T+ + + Q Y + C Sbjct: 1 MRIISVNVNGIQAAAERGLLSWLQAQNADVICLQDTRASAFDLDDPSFQLDGYFLYACDA 60 Query: 63 --KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 GVA+ S+ QP +++ L + D R+++A F + L Sbjct: 61 ELPEQGGVALYSRLQPKAVISGLGFETADRYGRYLQADFDKVS-----IATLLLPSGQSG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI-IWENDACFTLEV 179 + K ++ F + S++ I+ G + Q D N + E Sbjct: 116 DESLNQKFKFMDDFTHYLSKQRRKRREYIYCGSLYVAHQKMDVKNWRECQQMPGFLAPER 175 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + N+G+ DA+R +S+W + N G R D+ +L+P + +A Sbjct: 176 AWLDEVFGNLGYADALREVSREGDQFSWWPDSEQAEMLNLGWRFDYQVLTPGLRRFVRNA 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 ++ +PR S H P+IV D Sbjct: 236 KLPRQPR----FSQHAPLIVDYDW 255 >gi|116669682|ref|YP_830615.1| exodeoxyribonuclease III Xth [Arthrobacter sp. FB24] gi|116609791|gb|ABK02515.1| exodeoxyribonuclease III Xth [Arthrobacter sp. FB24] Length = 273 Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats. Identities = 65/269 (24%), Positives = 109/269 (40%), Gaps = 10/269 (3%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +A+ NVN +RA + +A W++ DI+CLQE + DK + E Sbjct: 6 LRIASVNVNGLRAAYRNGMAEWLEPREVDILCLQEVRAPDKIVRELLGEGWFVLHEEAEA 65 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT-----QTLRIGNLYLPHGN 117 K GVAI S+ +P+ H+ D R++EA F + L + + Y+ G Sbjct: 66 KGRAGVAIASRTEPLATRPHIGDDYFATAGRWVEADFRLTDAAGAPVQLTVVSAYVHSGE 125 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + K DDK ++ + + + + GD N+ D N A F Sbjct: 126 -AGTPKQDDKFRFLDVMENRLPELAKHSDHALVVGDLNVGHTELDIKNWKGNVKRAGFLP 184 Query: 178 EVRQSFQKLQNMGFTDAIRATH---DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E R F + + Y++W ++ + G RID+ M +P + Sbjct: 185 EERAYFDRFFGEDIGWRDVHRGLAGNVDGPYTWWSQRGKAFDTDTGWRIDYHMATPALAA 244 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 SA +D P T+ SDH P++V + Sbjct: 245 AAISATVDRAPSWDTRFSDHAPLVVDYQL 273 >gi|325846697|ref|ZP_08169612.1| exodeoxyribonuclease III [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325481455|gb|EGC84496.1| exodeoxyribonuclease III [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 275 Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats. Identities = 64/280 (22%), Positives = 106/280 (37%), Gaps = 25/280 (8%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTED-------KNFP 46 + + +WN++S+ A + ++ I + + DIICLQETK K Sbjct: 1 MKIISWNIDSLNAALTSDSNRAKMSRDVLDTIIKEDADIICLQETKLPRTGPSKKHKQIL 60 Query: 47 FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 NY + + + A + E + LD + I + Sbjct: 61 ESYFPQYNYAWISSQEPARKSYAGCLTFYKKEFEPIISYPTLDAPDTMDQEARIITLEFD 120 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 + N + D + ++L+ +P+I GD+N+ + D +P Sbjct: 121 NFYLTQVYTPNAGSGLSRLDLRQVWDKKYANYLEKLDQNKPVIACGDFNVAHKEIDLKHP 180 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIRID 224 A FT E R F L N GF D R H D Y++W S N G RID Sbjct: 181 ENNHKSAGFTDEERSGFTNLLNKGFVDTFRYLHGDVEGKYTWWAQRVKTSKINNSGWRID 240 Query: 225 HIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 + ++S + + ID+ R DHTP+ +++DI Sbjct: 241 YFIVSDRIKEKIKESDMIDSGDRQ-----DHTPIYINIDI 275 >gi|149378372|ref|ZP_01896074.1| Exonuclease III [Marinobacter algicola DG893] gi|149357337|gb|EDM45857.1| Exonuclease III [Marinobacter algicola DG893] Length = 268 Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats. Identities = 59/268 (22%), Positives = 98/268 (36%), Gaps = 12/268 (4%) Query: 4 VTVATWNVNSI-RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + V T +VN + +A W+ + D++C+Q+ + L Y Sbjct: 1 MRVVTISVNGLAQAVEKGFFEWLARQDADVVCVQDHRMRAYEIEDFNLIPEGYEAYFIDG 60 Query: 62 -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG---- 116 + GV I +++ P I+ + D + RFI+A F + + L Sbjct: 61 ERNEDGGVGIYTRHFPKAIMYGFANEQADREGRFIQADFDKVSVACVLSPSALGREEELI 120 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN-PIIWENDACF 175 T D K +++ F + L IF + D + Sbjct: 121 GEDDLTVLDHKDDFMEAFGLHMQKTLRKRRQFIFCANLQTAHHVTDASPLYHKLDFSGFL 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E + MG DA R + + Y++W A+ KN GIR+D+ +L+P Sbjct: 181 PHERAWLDRLFDEMGCVDAFRDINKQSNQYTWWPEQAEGSRKNAGIRVDYQLLTPGIRKT 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + ID R SDH PVI+ DI Sbjct: 241 IQDGWIDDSTR----FSDHAPVIMDYDI 264 >gi|152986497|ref|YP_001351424.1| catabolite repression control protein [Pseudomonas aeruginosa PA7] gi|150961655|gb|ABR83680.1| catabolite repression control protein [Pseudomonas aeruginosa PA7] Length = 259 Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats. Identities = 60/264 (22%), Positives = 108/264 (40%), Gaps = 13/264 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + + NVN I+A L +W++ N D+ICLQ+T+ + + Q Y + C Sbjct: 1 MRIISVNVNGIQAAAERGLLSWLQAQNADVICLQDTRASAFDLDDPSFQLDGYFLYACDA 60 Query: 63 --KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 GVA+ S+ QP +++ L + D R+++A F + L Sbjct: 61 ELPEQGGVALYSRLQPKAVISGLGFETADRYGRYLQADFDKVS-----IATLLLPSGQSG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI-IWENDACFTLEV 179 + K ++ F + S++ I+ G + Q D N + E Sbjct: 116 DESLNQKFKFMDDFTHYLSKQRRKRREYIYCGSLYVAHQKLDVKNWRECQQMPGFLAPER 175 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + N+G+ DA+R +S+W + N G R D+ +L+P + +A Sbjct: 176 AWLDEVFGNLGYADALREVSREGDQFSWWPDSEQAEMLNLGWRFDYQVLTPGLRRFVRNA 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 ++ +PR S H P+IV D Sbjct: 236 KLPRQPR----FSQHAPLIVDYDW 255 >gi|77461766|ref|YP_351273.1| exodeoxyribonuclease III xth [Pseudomonas fluorescens Pf0-1] gi|77385769|gb|ABA77282.1| catabolite repression control protein [Pseudomonas fluorescens Pf0-1] Length = 259 Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats. Identities = 64/264 (24%), Positives = 109/264 (41%), Gaps = 13/264 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + + NVN I+A + L +W++ N D+ICLQ+T+ Q Y + C Sbjct: 1 MRIISVNVNGIQAAVERGLLSWLQAQNADVICLQDTRASAFELDDPAFQLDGYFLYACDA 60 Query: 62 -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + GVA+ S+ QP +++ L + D R+++A F + L Sbjct: 61 EVPAQGGVALYSRLQPKAVISGLGFETADRYGRYLQADFDKVSI-----ATLLLPSGMNG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF-TLEV 179 + K + F ++ ++ I+ G + Q D N + F E Sbjct: 116 DEDLNQKFKLMDDFGKYLDKQRRKRREYIYCGSLYVAQQKLDIKNWRDSQQSPGFLAPER 175 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + + NMG+ DA+R YS+W + N G R D+ +L+P + SA Sbjct: 176 AWMDEIVGNMGYVDALREVSREGDQYSWWPDNEQAEMLNLGWRFDYQILTPGLRRFVRSA 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 R+ +PR S H P+IV D Sbjct: 236 RLPRQPR----FSQHAPLIVDYDW 255 >gi|156398432|ref|XP_001638192.1| predicted protein [Nematostella vectensis] gi|156225311|gb|EDO46129.1| predicted protein [Nematostella vectensis] Length = 506 Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats. Identities = 57/324 (17%), Positives = 100/324 (30%), Gaps = 51/324 (15%) Query: 4 VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + TWN+N +RA R L ++ D++C QETK T + Y Sbjct: 1 MKILTWNINGLRAVTREKKLKDFLNSLEADVMCFQETKITRDMLEEATCMADGYTAFFSF 60 Query: 62 QKSYNGVAILSKYQPIEIV----------------------------THLPGDDLDVQAR 93 + +G + ++ + + Sbjct: 61 SRVKSGYSGVATFCKDSTTPLAAEEGLTSQLSASPDIGFYGDDEEFTSDQLSRLDSEGRT 120 Query: 94 FIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGD 153 + + T+ I N+Y P + + K+ + + + L + +I GD Sbjct: 121 ILTEHTLSSGGTVVIINVYCPRADMENEDRIQFKLEFHRLLSKRVKALLNSGKHVIVLGD 180 Query: 154 YNIIPQPHDCYNPIIWENDACFT---------------LEVRQSFQKLQNMGFTDAIRAT 198 N +P D NP +E+ + F S K + D+ R Sbjct: 181 INAAHKPIDHCNPCKYEDFSSFPGRAWLDELLVSLPLPDNSCDSSWKCVSGLLIDSFRYF 240 Query: 199 HDTHHL-YSFWDYYADSWSKNKGIRIDHIMLSPEATSL-LHSARIDTKPRGWTKPSDHTP 256 H Y+ W + N G RID+I++ P I + G SDH P Sbjct: 241 HPLQREAYTNWSTSTGARQTNYGTRIDYILVDPPLLQQEFVDCVIRPEVEG----SDHCP 296 Query: 257 VIVSLDIPEPRKKQQDSTSQNMKP 280 V+ +L + P Sbjct: 297 VVCTLKNRFLAANKTPLLCTKFMP 320 >gi|145294844|ref|YP_001137665.1| hypothetical protein cgR_0791 [Corynebacterium glutamicum R] gi|140844764|dbj|BAF53763.1| hypothetical protein [Corynebacterium glutamicum R] Length = 304 Score = 139 bits (351), Expect = 4e-31, Method: Composition-based stats. Identities = 57/296 (19%), Positives = 103/296 (34%), Gaps = 45/296 (15%) Query: 6 VATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKN----FPFETLQSLN 54 + + NVN IRA + W++E PD++ LQE + +K+ + Sbjct: 5 ITSVNVNGIRAAVKQRSETNLGFLPWLEETRPDVVLLQEVRASEKDTATALQPALDNGWH 64 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 Y K GV ILS+++ ++ + T + + +LYLP Sbjct: 65 YIGAPAAAKGRAGVGILSRHELEDVNIGFGSFLDSGRYIEATIKDTTLEVPVTVASLYLP 124 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 G+ + K D+K ++ F F QR + ++ GD+NI + D N + + Sbjct: 125 SGS-AGTDKQDEKYRFLDEFEGFLDQRAKERSHMVIGGDWNICHRREDLKNWKTNQKKSG 183 Query: 175 FTLEVRQSFQKLQN---------------------------------MGFTDAIRATHDT 201 F + R + F A R + Sbjct: 184 FLPDERAFMDSVFGTFPDEATQVAGAGDFFGAVDYEGTRRREATTDPAWFDVARRLQPEG 243 Query: 202 HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257 Y++W Y ++ G RID+ + + +D + SDH+P+ Sbjct: 244 DGPYTWWTYRGKAFDTGAGWRIDYQAATAAMLERAERSWVDKATAYDLRWSDHSPL 299 >gi|237797784|ref|ZP_04586245.1| exodeoxyribonuclease III [Pseudomonas syringae pv. oryzae str. 1_6] gi|331020634|gb|EGI00691.1| exodeoxyribonuclease III [Pseudomonas syringae pv. oryzae str. 1_6] Length = 259 Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats. Identities = 63/264 (23%), Positives = 108/264 (40%), Gaps = 13/264 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + + NVN I+A + L +W++ N D+ICLQ+T+ Q Y + C Sbjct: 1 MRIISVNVNGIQAAVERGLLSWLQAQNADVICLQDTRASAFELDDPAFQLDGYFLYACEA 60 Query: 62 -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + GVA+ S+ QP +++ L + D R+++A F + L Sbjct: 61 EVPAQGGVALYSRLQPKAVISGLGFETADRYGRYLQADFDKVSI-----ATLLFPSGMSG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF-TLEV 179 + K + F ++ ++ I+ G + Q D N + F E Sbjct: 116 DEDLNQKFKLMDDFGKYMDKQRRKRREYIYCGSLYVAQQKLDVKNWRDSQQSPGFLAPER 175 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + + MG+ DA+R YS+W + N G R D+ +L+P + SA Sbjct: 176 AWMDEIVGTMGYVDALREVSREGDQYSWWPDNEQAEMLNLGWRFDYQILTPGLRRFVRSA 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 R+ +PR S H P+IV D Sbjct: 236 RLPRQPR----FSQHAPLIVDYDW 255 >gi|227875870|ref|ZP_03993996.1| possible exodeoxyribonuclease III [Mobiluncus mulieris ATCC 35243] gi|269977505|ref|ZP_06184477.1| exodeoxyribonuclease III [Mobiluncus mulieris 28-1] gi|306819151|ref|ZP_07452865.1| exodeoxyribonuclease III [Mobiluncus mulieris ATCC 35239] gi|227843618|gb|EEJ53801.1| possible exodeoxyribonuclease III [Mobiluncus mulieris ATCC 35243] gi|269934421|gb|EEZ90983.1| exodeoxyribonuclease III [Mobiluncus mulieris 28-1] gi|304648127|gb|EFM45438.1| exodeoxyribonuclease III [Mobiluncus mulieris ATCC 35239] Length = 289 Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats. Identities = 41/289 (14%), Positives = 85/289 (29%), Gaps = 29/289 (10%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + T NVN +RA W+ ++ ++ CLQE + ++ + + + C Sbjct: 1 MKITTVNVNGVRAAFRKGFGDWLANDDSELYCLQEVRATVEDTVTLFGSAFDVRVWPCRI 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K GVA++++ + + + L G+ + Sbjct: 61 KGRAGVALVARRDSAFSLGGTREGLPAALYDESGEPDVDSGRWLEAEVSLPGGGSLTLVS 120 Query: 123 KYDDKISWIKRFLRFASQRL------------------ELEEPLIFAGDYNIIPQPHDCY 164 Y L + GD+NI+ D Sbjct: 121 AYLHSGELGSEKQEQKLAYLERATKRLSELAATARAAGAGAAQALVCGDFNIVRTERDIK 180 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH----------DTHHLYSFWDYYADS 214 N N ++ + + + Y++W + Sbjct: 181 NWKPNHNKVSGVMDEEIAILDTWMSDSLEGTAKHPAVDVTRALLGEVQGPYTWWSQRGKA 240 Query: 215 WSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + + G RID+ M +P + + P + SDH P+ ++ I Sbjct: 241 FDNDAGWRIDYQMATPGLATHAAEVSVWRAPSYAERWSDHAPLSITYQI 289 >gi|146280860|ref|YP_001171013.1| catabolite repression control protein [Pseudomonas stutzeri A1501] gi|145569065|gb|ABP78171.1| catabolite repression control protein [Pseudomonas stutzeri A1501] gi|327479128|gb|AEA82438.1| catabolite repression control protein [Pseudomonas stutzeri DSM 4166] Length = 259 Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats. Identities = 64/264 (24%), Positives = 109/264 (41%), Gaps = 13/264 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + + NVN I+A L +W++ N D+ICLQ+T+ Q Y + C Sbjct: 1 MRIISVNVNGIQAAAQRGLLSWLQAQNADVICLQDTRASALELDDPAYQLDGYFLYACDA 60 Query: 62 -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 GVA+ S+ QP ++T L + D R+++A F + + Sbjct: 61 EIPEQGGVALYSRLQPKAVITGLGFETADRYGRYLQADFDKVSIASLLVP-----SGQGG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF-TLEV 179 + K+ ++ F + ++ I+ G + Q D N + D F E Sbjct: 116 DANLNHKLKFMDDFAHYLDKQRRKRREYIYCGSLYVAHQKLDVKNWRDCQQDPGFLAPER 175 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + NMG+ DA+R + L+S+W + N G R D+ +L+ + SA Sbjct: 176 AWLDEIFGNMGYIDALREVNREGDLFSWWPDTEQAEMLNLGWRFDYQILTSGLRRFVRSA 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 R+ +PR S H P+IV D Sbjct: 236 RLPRQPR----FSQHAPLIVDYDW 255 >gi|194466723|ref|ZP_03072710.1| exodeoxyribonuclease III Xth [Lactobacillus reuteri 100-23] gi|194453759|gb|EDX42656.1| exodeoxyribonuclease III Xth [Lactobacillus reuteri 100-23] Length = 253 Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats. Identities = 66/258 (25%), Positives = 107/258 (41%), Gaps = 13/258 (5%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +W+VN +++ I H K + D CLQ T+ + PF+ Y + Sbjct: 1 MKFISWSVNGLKSAINHGFVEDFKRQDADFFCLQRTRLDKGEEPFQIPNYYQY-WNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +KY+P ++ + D + R I + I G + Sbjct: 60 KGYSGTAIFTKYKPENVIYGMNNSIFDKEGRLITLEYP---NFYLIDVYVPVSGEKLQHL 116 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 Y R L+ +P+I GD ++ QP D P + A FT + R Sbjct: 117 DYR---LDWDRAFLDYVTNLQSSKPVIIGGDMSVAYQPIDLAEPTEDHHKAGFTKQERSD 173 Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F KL + G TD R H H Y++W Y D+ +N G R+D+ ++S + A+I Sbjct: 174 FGKLLDAGLTDTFRYLHPNLHGAYTWWSYRYDARERNVGWRLDYFLVSDVWKERIEEAKI 233 Query: 242 DTKPRGWTKPSDHTPVIV 259 + K S H P+ + Sbjct: 234 LSDV----KGSSHCPIEL 247 >gi|221112376|ref|XP_002160726.1| PREDICTED: similar to predicted protein [Hydra magnipapillata] Length = 511 Score = 139 bits (350), Expect = 5e-31, Method: Composition-based stats. Identities = 62/334 (18%), Positives = 101/334 (30%), Gaps = 61/334 (18%) Query: 4 VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + TWN+N IRA R H+L + DIICLQETK Y+ Sbjct: 1 MKILTWNINGIRATSRNHSLGNLLDSLEADIICLQETKITRNLLTDHLANVEGYYAFFSF 60 Query: 62 QKSYNGVAILSKYQPIEIVT-------------------HLPGDDLDVQAR--------- 93 K G + ++ + + + + Sbjct: 61 SKRKTGYSGVATFCKKTLCPIAAEEGLTGLFTSKMEQVVGFYNNPPEYSDELLRSLDSEG 120 Query: 94 --FIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFA 151 I T + Q L I N+Y P + ++ K+ + + + + +I Sbjct: 121 RCMITEHVTSDGQRLCIINVYCPRADVEEKERFHYKMCFYRLLQMRIISLMREKRNIIVV 180 Query: 152 GDYNIIPQPHDCYNPIIWENDACFTLEV------------------------RQSFQKLQ 187 GD N+ + D +P F +K Sbjct: 181 GDLNVSHKRIDSCDPCEICIQIFFFKVELLAVDAVVDLTVDKISEHIQIKGSESFSEKNV 240 Query: 188 NMGFTDAIRATHDTHH-LYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR 246 N D R H Y+ W+ + N G RID I+ + ++L + I + Sbjct: 241 NNFLVDTFRIFHPNEQNAYTCWNTQTRARETNFGTRIDFILADHQLCTVLTNCVILADVQ 300 Query: 247 GWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 G SDH PV+ +I T P Sbjct: 301 G----SDHCPVVADFNILLKASNLIPKTCAAFMP 330 >gi|219122782|ref|XP_002181718.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217406994|gb|EEC46932.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 489 Score = 139 bits (349), Expect = 5e-31, Method: Composition-based stats. Identities = 63/322 (19%), Positives = 116/322 (36%), Gaps = 61/322 (18%) Query: 3 VVTVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN---- 54 + +A+WNV +RA + N L+ +++E+N D++CLQETK ++ + L+ Sbjct: 166 TMRIASWNVAGLRALMRNSPHALSDFVREHNVDVLCLQETKLQESHLDDPKLKIRGHLLE 225 Query: 55 ------YHIETCGQKSYNGVAIL------------------------------------- 71 Y+ + +K Y+G ++ Sbjct: 226 KEGFDSYYSCSTARKGYSGTSVFVKRRQLIKGSKVAKKQKTLGSYFGKNDERETSSNSLK 285 Query: 72 -----SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY-LPHGNPITSTKYD 125 S + + + + ++ + + N+Y G + Y Sbjct: 286 GTEELSIDPHLLVPEGVSFQMNVDKHDSEGRIVVVDFPSFTMCNVYVPNSGQKLERLSYR 345 Query: 126 DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ--PHDCYNPIIWENDACFTLEVRQSF 183 + ++ + P+++ GD N+ A T E R SF Sbjct: 346 TEEWDKDFLSFIQKKQKDRGVPVLWLGDLNVAHTNLEVWNDGAKHLAKQAGVTAEERASF 405 Query: 184 QKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI- 241 + N GF DA R H T YS+W A + NKG+R+D+ + P + Sbjct: 406 EAQLNAGFIDAFRRLHPTAKGHYSYWSQRAGNREPNKGLRLDYFICDPSLFDEESKTIVR 465 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 D+ + SDH PV++ L+I Sbjct: 466 DSYVLPLQQGSDHCPVVLELEI 487 >gi|295425010|ref|ZP_06817719.1| exodeoxyribonuclease III [Lactobacillus amylolyticus DSM 11664] gi|295065328|gb|EFG56227.1| exodeoxyribonuclease III [Lactobacillus amylolyticus DSM 11664] Length = 275 Score = 138 bits (348), Expect = 6e-31, Method: Composition-based stats. Identities = 55/280 (19%), Positives = 105/280 (37%), Gaps = 25/280 (8%) Query: 4 VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTED-------KNFP 46 + + +WN++S+ A + + + + PD++ +QETK + Sbjct: 1 MKLISWNIDSLNAALTGQSTRALETRKILERLHDEAPDVLAIQETKLPATGPTKKHQTIL 60 Query: 47 FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 E Y + + + G A + + I + Sbjct: 61 KEMFPEYKYFWRSSEEPARKGYAGTMYLYKKGLELKASYPKIGAPEPMDSEGRIITLEFP 120 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 + N K + Q+L+ ++P++ +GD+N P D +P Sbjct: 121 TFFVTQVYTPNSGNGLKRLADRQVWDQRYIEYLQQLDKQKPVLASGDFNCAHTPIDLKHP 180 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYY-ADSWSKNKGIRID 224 + A FT E R+ F +L + GFTD+ R + +YS+W + + N G RID Sbjct: 181 ENNHHSAGFTDEERKDFTQLLDAGFTDSFRKINGNVEGVYSWWAQRVRTAKANNSGWRID 240 Query: 225 HIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 + + S + + IDT R DH P+++ +D+ Sbjct: 241 YWLTSNRIADKIRRSEMIDTGKRA-----DHCPILLDIDL 275 >gi|330901156|gb|EGH32575.1| exonuclease III [Pseudomonas syringae pv. japonica str. M301072PT] Length = 219 Score = 138 bits (348), Expect = 7e-31, Method: Composition-based stats. Identities = 72/219 (32%), Positives = 110/219 (50%), Gaps = 9/219 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +RAR H LAA I ++ PD+I LQETK D+ FP +++L YH+ GQK Sbjct: 1 MKIVSFNINGLRARPHQLAALIDKHQPDVIGLQETKVSDEQFPQAEVEALGYHVHFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122 + GVA+LS+ P+ + GDD + Q RFI T+ N Q + I N Y P G Sbjct: 61 GHYGVALLSRNAPLALHKGFEGDDEESQKRFIWGTYADSNGQPVTIMNGYFPQGGSRDHP 120 Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175 K+ K + + + ++PLI GD NI PQ D + F Sbjct: 121 TKFPAKQRFYENLQTLLEGQFRNDQPLIVMGDVNISPQDCDIGIGADNAKRWLKTGKCSF 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYAD 213 E R+ ++L+N G D+ R H +S++DY + Sbjct: 181 LPEEREWMERLKNWGLVDSFRHLHPEVVDRFSWFDYRSR 219 >gi|256545331|ref|ZP_05472695.1| exodeoxyribonuclease III [Anaerococcus vaginalis ATCC 51170] gi|256399012|gb|EEU12625.1| exodeoxyribonuclease III [Anaerococcus vaginalis ATCC 51170] Length = 275 Score = 138 bits (348), Expect = 7e-31, Method: Composition-based stats. Identities = 62/280 (22%), Positives = 102/280 (36%), Gaps = 25/280 (8%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTED-------KNFP 46 + +WN++S+ A + ++ I + D+ICLQETK + Sbjct: 1 MKFISWNIDSLNAALTSDSNRAVMSRDVLKTIISEDADVICLQETKLPRTGPSKKHQKIL 60 Query: 47 FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 E S +Y + + + A + T + LD + I + Sbjct: 61 EEYFPSYDYAWVSSQEPARKSYAGCLTLYKKNLQTKITFPVLDAPDTMDQEARIITLEFE 120 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 + + N + L+ + +I GD+N+ + D +P Sbjct: 121 KFYLTQVYTPNAGNGLNRLGLRQIWDEKFANYLENLDKNKAVIACGDFNVAHKEIDLKHP 180 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIRID 224 A FT E R F L N GF D R H D Y++W S N G RID Sbjct: 181 ENNHESAGFTDEERNGFTNLLNKGFVDTFRYIHGDVEGKYTWWAQRVKTSKINNSGWRID 240 Query: 225 HIMLSPEATSLLHSA-RIDTKPRGWTKPSDHTPVIVSLDI 263 + ++S + + ID+ R DHTP+ +S+DI Sbjct: 241 YFIVSDRIKDKIKESNMIDSGDRQ-----DHTPIYLSIDI 275 >gi|83648975|ref|YP_437410.1| exonuclease III [Hahella chejuensis KCTC 2396] gi|83637018|gb|ABC32985.1| Exonuclease III [Hahella chejuensis KCTC 2396] Length = 257 Score = 138 bits (348), Expect = 7e-31, Method: Composition-based stats. Identities = 59/265 (22%), Positives = 103/265 (38%), Gaps = 13/265 (4%) Query: 4 VTVATWNVNSI-RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + V T +VN + RA W+ + D++C+Q+ + + + Y Sbjct: 1 MRVVTISVNGLKRAVGEGFFEWMARQDADVVCVQDHRMRVYELDEDKYRPEGYEPYFLDA 60 Query: 63 K--SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + GV I ++ P I+ D+ FI+A F + I +L +P Sbjct: 61 EKLEDGGVGIYTRQIPKAIMMGFSYAPADMNGAFIQADFDA----VSIASLMVPCALMDD 116 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EV 179 + K +++ F + L IF G++ D + F E Sbjct: 117 EKQQA-KEEYLEAFGNHLQKTLRKRRQFIFCGNFQTAHLVTDANPRYHRLEVSGFLPQER 175 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 Q M + DA R + + Y++W A+ W K+ G R+D+ + + S + A Sbjct: 176 AWFDQVFDEMQYVDAFRKINREKNQYTWWPESAEGWRKHSGWRVDYQIATQGLRSAIKRA 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIP 264 IDT+ R SDH P+IV D+ Sbjct: 236 WIDTETR----FSDHAPLIVDYDVD 256 >gi|146309398|ref|YP_001189863.1| exodeoxyribonuclease III Xth [Pseudomonas mendocina ymp] gi|145577599|gb|ABP87131.1| exodeoxyribonuclease III Xth [Pseudomonas mendocina ymp] Length = 259 Score = 138 bits (348), Expect = 7e-31, Method: Composition-based stats. Identities = 68/264 (25%), Positives = 114/264 (43%), Gaps = 13/264 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + + NVN I+A L +W++ N D+ICLQ+T+ + Q Y + C Sbjct: 1 MRIISVNVNGIQAAAERGLLSWLQAQNADVICLQDTRASAFEMDDQAFQLDGYFLYACDG 60 Query: 62 -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 S GVA+ S+ QP +++ L + D R+++A F + I L LP G Sbjct: 61 EVPSQGGVALYSRLQPKAVISGLGFEMADRYGRYLQADFD----KVSIATLLLPTGR-DG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF-TLEV 179 + K ++ F + ++ I+ G ++ Q D N + F E Sbjct: 116 DESLNQKFKFMDDFTHYLDKQRRKRREYIYCGSLHVAHQKLDVKNWRDCQQSPGFLAPER 175 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + + NMG+ DA+R +S+W + N G R D+ +L+P + SA Sbjct: 176 AWMDEVVGNMGYVDALREVSREGDQFSWWPDNEQAEMLNLGYRFDYQLLTPGMRRSVRSA 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 R+ +PR S H P+IV D Sbjct: 236 RLPRQPR----FSQHAPLIVDYDW 255 >gi|88797191|ref|ZP_01112781.1| catabolite repression control protein [Reinekea sp. MED297] gi|88780060|gb|EAR11245.1| catabolite repression control protein [Reinekea sp. MED297] Length = 253 Score = 138 bits (348), Expect = 7e-31, Method: Composition-based stats. Identities = 65/265 (24%), Positives = 115/265 (43%), Gaps = 17/265 (6%) Query: 4 VTVATWNVNSI-RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC-- 60 + V T NVN I A W++ + D++C+Q+T+ ++ P L+ Y+ Sbjct: 1 MKVVTINVNGIVNAAQRGFLQWLEHQDVDVVCVQDTRAKEYQLPEAFLEVPGYNAFFFDA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + Y G AI S+ P I+ D+Q FI+A F + + ++++P + Sbjct: 61 DEDDYAGTAIYSRTMPKAIIRGFGNPTYDLQGGFIQADFD----NVSVASVWVPPAYYLE 116 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 D K+ +++ + + IFAG Y I + D N + D F E R Sbjct: 117 DV--DAKLEYLEALQQHLKRTRRKRRDFIFAGSYQIAHRSVDLGNWERHQRDPGFLPEER 174 Query: 181 QSFQKLQN-MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + +GF DA R T+ ++FW + ++ G R+D+ +++P + A Sbjct: 175 AWMDQAVGPIGFVDAFRLTNKQDRQHTFWPF---DEAQANGSRLDYQLITPNLADFVVEA 231 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIP 264 I +PR S H PV+V D+ Sbjct: 232 TILREPR----MSPHCPVLVEYDMD 252 >gi|330972204|gb|EGH72270.1| exodeoxyribonuclease III [Pseudomonas syringae pv. aceris str. M302273PT] Length = 259 Score = 138 bits (348), Expect = 7e-31, Method: Composition-based stats. Identities = 63/264 (23%), Positives = 108/264 (40%), Gaps = 13/264 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + + NVN I+A + L +W++ N D+ICLQ+T+ Q Y + C Sbjct: 1 MRIISVNVNGIQAAVERGLLSWLQAQNADVICLQDTRASTFELDDPAFQLDGYFLYACEA 60 Query: 62 -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + GVA+ S+ QP +++ L + D R+++A F + L Sbjct: 61 EVPAQGGVALYSRLQPKAVISGLGFETADRYGRYLQADFDKVSI-----ATLLFPSGMNG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF-TLEV 179 + K + F ++ ++ I+ G + Q D N + F E Sbjct: 116 DEDLNQKFKLMDDFGKYMDKQRRKRREYIYCGSLYVAQQKLDIKNWRDSQQSPGFLAPER 175 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + + MG+ DA+R YS+W + N G R D+ +L+P + SA Sbjct: 176 AWMDEIVGTMGYVDALREVSREGDQYSWWPDNEQAEMLNLGWRFDYQILTPGLRRFVRSA 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 R+ +PR S H P+IV D Sbjct: 236 RLPRQPR----FSQHAPLIVDYDW 255 >gi|307546984|ref|YP_003899463.1| exodeoxyribonuclease III Xth [Halomonas elongata DSM 2581] gi|307219008|emb|CBV44278.1| exodeoxyribonuclease III Xth [Halomonas elongata DSM 2581] Length = 255 Score = 138 bits (347), Expect = 8e-31, Method: Composition-based stats. Identities = 55/266 (20%), Positives = 104/266 (39%), Gaps = 19/266 (7%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60 + +AT NVN IR + W+ + D++C+Q K + L Y + Sbjct: 1 MKIATINVNGIREAVGRGFLDWLANQDADVVCVQNLKAKSFELDGSILYPEGYEGYFLDA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 Q ++GV + + P I+ L D +ARF++A + I + +P G+ Sbjct: 61 EQDGFSGVGLYCRKIPKAIMYGLGFPQCDHEARFLQADYD----RFSIASFLMPDGSDP- 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 K +++ ++ + ++ I G ++I + D N + F E R Sbjct: 116 ----AAKQNFMAQYQEYLTKMARKRREYIICGTWHIAHKTIDLENWADNQTTPGFKPEER 171 Query: 181 QSFQKLQNMG-FTDAIRATHDTHHLYSFWD--YYADSWSKNKGIRIDHIMLSPEATSLLH 237 ++ F D R + Y++W + +G RID+ ++ P + Sbjct: 172 AWMDQVFGPTGFIDTFREINRDAGEYTWWPALDQDQPRERQEGWRIDYQIVGPNFRRHVV 231 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263 A ID S++ P+IV D+ Sbjct: 232 DAWIDYDAT----FSEYAPLIVEYDL 253 >gi|301114885|ref|XP_002999212.1| DNA-(apurinic or apyrimidinic site) lyase, putative [Phytophthora infestans T30-4] gi|262111306|gb|EEY69358.1| DNA-(apurinic or apyrimidinic site) lyase, putative [Phytophthora infestans T30-4] Length = 482 Score = 138 bits (347), Expect = 8e-31, Method: Composition-based stats. Identities = 56/313 (17%), Positives = 94/313 (30%), Gaps = 58/313 (18%) Query: 4 VTVATWNVNSIRARIH----NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 + + TWNVN +RA + NL +++ DIICLQETK E ++ + Sbjct: 5 LRLVTWNVNGLRAVLQRLEQNLLQFLESLEADIICLQETKLTRSELDEELVRPPGFDAFY 64 Query: 60 CGQKSYNGVA----------------------ILSKYQPIEIVTHLPGDDLDVQARFIEA 97 + G + +K + + + Sbjct: 65 SFCRHRGGYSGVVTFVKGDLPTVAAEEGLTGHWQTKDNVGHVGSLHDELPSKILNDLEAE 124 Query: 98 TFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII 157 I T L ++ + + K+ + + + +I GD NI Sbjct: 125 GRCIITDHQTFVLLNTYCPALASADRLEYKLQFHGLLEDRVNALRAANKRVIVVGDINIA 184 Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQK-----------------------LQNMGFTDA 194 + D +P +D + + D Sbjct: 185 HREIDHCDPHAHRDDGSSFGDHPCRKWMDSFVGVSGEKYLPNPHSDDIVDGEPAVKMIDT 244 Query: 195 IRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253 R H Y+ W+ + N G RID+I+ P + S ID + G SD Sbjct: 245 YRHFHPDQTKAYTCWNTQTGARQTNYGTRIDYILADPTFIECVSSCSIDAERLG----SD 300 Query: 254 HTPV----IVSLD 262 H PV V L+ Sbjct: 301 HCPVLMSCTVELE 313 >gi|66043485|ref|YP_233326.1| exodeoxyribonuclease III xth [Pseudomonas syringae pv. syringae B728a] gi|71737295|ref|YP_272508.1| exodeoxyribonuclease III [Pseudomonas syringae pv. phaseolicola 1448A] gi|257481758|ref|ZP_05635799.1| exodeoxyribonuclease III, putative [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289625444|ref|ZP_06458398.1| exodeoxyribonuclease III Xth [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289646370|ref|ZP_06477713.1| exodeoxyribonuclease III Xth [Pseudomonas syringae pv. aesculi str. 2250] gi|298484823|ref|ZP_07002923.1| Exodeoxyribonuclease III [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|302189243|ref|ZP_07265916.1| exodeoxyribonuclease III Xth [Pseudomonas syringae pv. syringae 642] gi|63254192|gb|AAY35288.1| Exodeoxyribonuclease III xth [Pseudomonas syringae pv. syringae B728a] gi|71557848|gb|AAZ37059.1| exodeoxyribonuclease III, putative [Pseudomonas syringae pv. phaseolicola 1448A] gi|298160677|gb|EFI01698.1| Exodeoxyribonuclease III [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320322253|gb|EFW78349.1| exodeoxyribonuclease III Xth [Pseudomonas syringae pv. glycinea str. B076] gi|320331902|gb|EFW87840.1| exodeoxyribonuclease III Xth [Pseudomonas syringae pv. glycinea str. race 4] gi|330866529|gb|EGH01238.1| exodeoxyribonuclease III [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330873178|gb|EGH07327.1| exodeoxyribonuclease III [Pseudomonas syringae pv. glycinea str. race 4] gi|330941122|gb|EGH44002.1| exodeoxyribonuclease III [Pseudomonas syringae pv. pisi str. 1704B] gi|330952123|gb|EGH52383.1| exodeoxyribonuclease III [Pseudomonas syringae Cit 7] gi|330977341|gb|EGH77294.1| exodeoxyribonuclease III [Pseudomonas syringae pv. aptata str. DSM 50252] gi|330986867|gb|EGH84970.1| exodeoxyribonuclease III [Pseudomonas syringae pv. lachrymans str. M301315] Length = 259 Score = 138 bits (347), Expect = 9e-31, Method: Composition-based stats. Identities = 63/264 (23%), Positives = 108/264 (40%), Gaps = 13/264 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + + NVN I+A + L +W++ N D+ICLQ+T+ Q Y + C Sbjct: 1 MRIISVNVNGIQAAVERGLLSWLQAQNADVICLQDTRASTFELDDPAFQLDGYFLYACEA 60 Query: 62 -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + GVA+ S+ QP +++ L + D R+++A F + L Sbjct: 61 EVPAQGGVALYSRLQPKAVISGLGFETADRYGRYLQADFDKVSI-----ATLLFPSGMNG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF-TLEV 179 + K + F ++ ++ I+ G + Q D N + F E Sbjct: 116 DEDLNQKFKLMDDFGKYMDKQRRKRREYIYCGSLYVAQQKLDIKNWRDSQQSPGFLAPER 175 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + + MG+ DA+R YS+W + N G R D+ +L+P + SA Sbjct: 176 AWMDEIVGTMGYVDALREVSREGDQYSWWPDNEQAEMLNLGWRFDYQILTPGLRRFVRSA 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 R+ +PR S H P+IV D Sbjct: 236 RLPRQPR----FSQHAPLIVDYDW 255 >gi|313887924|ref|ZP_07821603.1| exodeoxyribonuclease III [Peptoniphilus harei ACS-146-V-Sch2b] gi|312846090|gb|EFR33472.1| exodeoxyribonuclease III [Peptoniphilus harei ACS-146-V-Sch2b] Length = 275 Score = 138 bits (347), Expect = 9e-31, Method: Composition-based stats. Identities = 67/283 (23%), Positives = 104/283 (36%), Gaps = 31/283 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTED-------KNFP 46 + + +WN++SI A + + A I +PDII +QETK K Sbjct: 1 MKIISWNIDSINAALTSDSNRAQMSREVLATILREDPDIIAIQETKLPKGGPSKKHKEIL 60 Query: 47 FETLQSLNYHIET---CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 E +Y + +K Y G K VT D D Sbjct: 61 AEMFADYDYVFVSSEEPARKGYAGNMAFFKKGLEPTVTFPKIDAPDTMDFEGRIITLEFD 120 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 G + L+ +P+I GD+N+ + D Sbjct: 121 DFFLTQVYTPNAGGELKRLPLRQIW---DEKYGEYLSSLDEIKPVIATGDFNVAHKEIDL 177 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221 NP A FT E RQ F L + GFTD R H D ++++W S N G Sbjct: 178 ANPDGNRMSAGFTDEERQGFTNLLDRGFTDTFRHIHGDVEGVFTWWAQRVKTSKINNSGW 237 Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 RID+ ++S L+ ++ ID+ R DHTP+++ +++ Sbjct: 238 RIDYFIVSDRIKDLVKDSKMIDSGERQ-----DHTPILLDINL 275 >gi|194228591|ref|XP_001494126.2| PREDICTED: similar to apurinic/apyrimidinic endonuclease 2 [Equus caballus] Length = 512 Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats. Identities = 56/335 (16%), Positives = 103/335 (30%), Gaps = 63/335 (18%) Query: 3 VVTVATWNVNSIRARIHNLAA------------WIKENNPDIICLQETKTEDKNF--PFE 48 ++ V +WN+N IR + + + + + DI+CLQETK P Sbjct: 1 MLRVVSWNINGIRRPLQGVCEEPSNCTAMAMGRVLDKLDADIVCLQETKVTRDVLTEPLA 60 Query: 49 TLQSLN-YHIETCGQKSYNGVAILSKYQPIEI------------VTHLPGDDLDVQA--- 92 ++ N Y + + Y+GVA K + G ++ Sbjct: 61 IIEGYNSYFSFSRNRSGYSGVATFCKDSATPVAAEEGLSGLLATHNGDVGCYGNMDEFTQ 120 Query: 93 ---------------RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF 137 + T +TL + N+Y PH +P + K+ + + Sbjct: 121 EELRALDSEGRALLTQHKIRTSEGKEKTLTLINVYCPHADPGKPERLAFKMRFYRLLQTR 180 Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCY-----------NPIIWENDACFTLEVRQSFQKL 186 A L +I GD N +P D + W + + Sbjct: 181 AEALLAAGSHVIILGDLNTAHRPIDHWDAVNLECFEDDPGRKWMDSLLSNPGCQAESHVG 240 Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT-SLLHSARIDTKP 245 + + ++ W + + N G R+D+++ ++ + + Sbjct: 241 PFIDSYRCFQP--KQEGAFTCWSVVSGARPLNYGCRLDYVLGDRTLVIDTFQASFLLPEV 298 Query: 246 RGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 G SDH PV L + KQ P Sbjct: 299 MG----SDHCPVGAVLSVSSVPAKQCPPLCTRFLP 329 >gi|307700018|ref|ZP_07637067.1| putative exodeoxyribonuclease III [Mobiluncus mulieris FB024-16] gi|307614779|gb|EFN93999.1| putative exodeoxyribonuclease III [Mobiluncus mulieris FB024-16] Length = 289 Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats. Identities = 47/289 (16%), Positives = 100/289 (34%), Gaps = 29/289 (10%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + T NVN +RA W+ ++ ++ CLQE + ++ + + + C Sbjct: 1 MKITTVNVNGVRAAFRKGFGDWLANDDSELYCLQEVRATVEDTVTLFGSAFDVRVWPCRI 60 Query: 63 KSYNGVAILSKYQPIEIV-----------THLPGDDLDVQARFIEATFTINTQTLRIGNL 111 K GVA++++ + G+ R++EA ++ Sbjct: 61 KGRAGVALVARRDSAFSLGDTREGLPAALYDESGEPDVDSGRWLEAEVSLPGGGSLTLVS 120 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRF-------ASQRLELEEPLIFAGDYNIIPQPHDCY 164 H + S K + K+++++R + A + GD+NI+ D Sbjct: 121 AYLHSGELESEKQEQKLAYLERATKRLSELAATARAAGAGAAQALVCGDFNIVRTERDIK 180 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH----------DTHHLYSFWDYYADS 214 N N ++ + + + Y++W + Sbjct: 181 NWKPNHNKVSGVMDEEIAILDAWMSDSLEGTAKHPAVDVTRALLGEVQGPYTWWSQRGKA 240 Query: 215 WSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + + G RID+ M +P + + P + SDH P+ ++ I Sbjct: 241 FDNDAGWRIDYQMATPGLATHAAEVSVWRAPSYAERWSDHAPLSITYQI 289 >gi|300779721|ref|ZP_07089577.1| possible exodeoxyribonuclease III [Corynebacterium genitalium ATCC 33030] gi|300533831|gb|EFK54890.1| possible exodeoxyribonuclease III [Corynebacterium genitalium ATCC 33030] Length = 301 Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats. Identities = 49/305 (16%), Positives = 100/305 (32%), Gaps = 49/305 (16%) Query: 1 MSVVTVATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 MS +T+A+ NVN IRA + AW+ + D++ +QE + ++ ++ Sbjct: 1 MS-LTIASVNVNGIRAATKVRNESNPGMLAWLTDTTADVVLMQEVRATEEQAQAALAPAI 59 Query: 54 --NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 +++ T + + + I + RFI T + Sbjct: 60 DQGWYVYTAPAAAKGRAGVAIASRTPLIDVSCGIPGFEDSGRFIAGTTPGGERV----AS 115 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 + K D+K ++ +F + ++ ++ GD+NI + D N + Sbjct: 116 LYLPSGSTGTEKQDEKWQFLDQFEPLLATWPDVYPDMVIGGDWNICHRREDLKNWKTNQK 175 Query: 172 DACFTLEVRQSFQK-----------------------------------LQNMGFTDAIR 196 + F R + D R Sbjct: 176 SSGFLPGERAFMDSVFGCFPDDEAQDTAAKDEAGFFGAVDYVSDARRSACDEPRWFDVAR 235 Query: 197 ATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTP 256 H Y++W Y +++ + G RID+ + ++ P + SDH+P Sbjct: 236 RLHPEDAPYTWWTYRGQAFNNDAGWRIDYHAATASMLERAERTWVEKAPTVEQRWSDHSP 295 Query: 257 VIVSL 261 ++V Sbjct: 296 LLVEY 300 >gi|330957291|gb|EGH57551.1| exodeoxyribonuclease III [Pseudomonas syringae pv. maculicola str. ES4326] Length = 259 Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats. Identities = 62/264 (23%), Positives = 108/264 (40%), Gaps = 13/264 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + + NVN I+A + L +W++ N D+ICLQ+T+ Q Y + C Sbjct: 1 MRIISVNVNGIQAAVERGLLSWLQAQNADVICLQDTRASTFELDDPAFQLDGYFLYACEA 60 Query: 62 -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + GVA+ S+ QP +++ L + D R+++A F + L Sbjct: 61 EVPAQGGVALYSRLQPKAVISGLGFEIADRYGRYLQADFDKVSI-----ATLLFPSGMNG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF-TLEV 179 + K + F ++ ++ I+ G + Q D N + F E Sbjct: 116 DEDLNQKFKLMDDFGKYMDKQRRKRREYIYCGSLYVAQQKLDIKNWRDSQQSPGFLAPER 175 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + + MG+ D++R YS+W + N G R D+ +L+P + SA Sbjct: 176 AWMDEIVGTMGYVDSLREVSREGDQYSWWPDNEQAEMLNLGWRFDYQILTPGLRRFVRSA 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 R+ +PR S H P+IV D Sbjct: 236 RLPRQPR----FSQHAPLIVDYDW 255 >gi|300857881|ref|YP_003782864.1| hypothetical protein cpfrc_00464 [Corynebacterium pseudotuberculosis FRC41] gi|300685335|gb|ADK28257.1| hypothetical protein cpfrc_00464 [Corynebacterium pseudotuberculosis FRC41] gi|302205608|gb|ADL09950.1| Putative exodeoxyribonuclease [Corynebacterium pseudotuberculosis C231] gi|302330161|gb|ADL20355.1| Putative exodeoxyribonuclease [Corynebacterium pseudotuberculosis 1002] gi|308275844|gb|ADO25743.1| Putative exodeoxyribonuclease [Corynebacterium pseudotuberculosis I19] Length = 299 Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats. Identities = 59/299 (19%), Positives = 107/299 (35%), Gaps = 42/299 (14%) Query: 4 VTVATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKNFPFETLQSL--N 54 + + T NVN IRA + + W+ + D++ LQE + +K+ +L Sbjct: 1 MQITTVNVNGIRAAVKERSETNKGMLPWLDGSGSDVVLLQEVRASEKDTLTALAPALDAG 60 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 +H + + + H+ + + R+I+AT T + +G+LYLP Sbjct: 61 WHYVGAPAAAKGRAGVGILSRSELFDVHVGIEGFEDSGRYIQATLHDGTDDVTVGSLYLP 120 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 G+ T D+K ++ F F Q + + ++ GD+NI + D N + Sbjct: 121 SGSAQTEK-QDEKYRFLDVFEPFLEQAAKDHKYMVIGGDWNICHRREDLKNWKTNRKKSG 179 Query: 175 FTLEVRQSFQKLQ--------------------------------NMGFTDAIRATHDTH 202 F + R + N + D R H Sbjct: 180 FLPDERAFMDSVFGTFPDAASQVEDAGQWAGAVDYASDGKRKPALNPQWFDVARRLHPQD 239 Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 Y++W Y ++ N G RID+ + +D + SDH+P+ V Sbjct: 240 APYTWWTYRGQAFDTNAGWRIDYQAATQAMLDRAEKTWVDKAEAYDLRWSDHSPLSVIY 298 >gi|226942449|ref|YP_002797522.1| catabolite repression control protein Crc [Azotobacter vinelandii DJ] gi|226717376|gb|ACO76547.1| catabolite repression control protein; Crc [Azotobacter vinelandii DJ] Length = 259 Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats. Identities = 68/264 (25%), Positives = 112/264 (42%), Gaps = 13/264 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + + NVN I+A + L +W++ N D+ICLQ+T+ T Q Y + T Sbjct: 1 MRIISVNVNGIQAAVERGLLSWLQAQNADVICLQDTRASAFELDDPTYQLDGYFLYTSEA 60 Query: 62 -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 S GVA+ S+ QP ++ L + D R+++A F + L Sbjct: 61 EVPSQGGVALYSRLQPKAVIGGLGFETADRYGRYLQADFDKVSI-----ATLLLPSGQGG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF-TLEV 179 + K ++ F R+ ++ I+ G + Q D N + F E Sbjct: 116 DESLNQKFKFMDDFARYLEKQRRKRREYIYCGSLYVAHQKQDVKNWRDCQQLPGFLAPER 175 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 Q + +MG+ DA+R T LYS+W + N G R D+ +L+P + +A Sbjct: 176 AWMDQIIGHMGYVDALRETSREGDLYSWWPDSEQAEMLNLGWRFDYQLLTPGMRRFVRNA 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 R+ +PR S H P+IV D Sbjct: 236 RLPRQPR----FSQHAPLIVDYDW 255 >gi|296235588|ref|XP_002762961.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase 2 [Callithrix jacchus] Length = 518 Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats. Identities = 62/335 (18%), Positives = 107/335 (31%), Gaps = 62/335 (18%) Query: 3 VVTVATWNVNSIRARIHNLA-------------AWIKENNPDIICLQETKTEDKNF--PF 47 ++ V +WN+N IR + +A + E + DI+CLQETK P Sbjct: 1 MLRVVSWNINGIRRPLQGMANQEPNNCAAVAVGRILDELDADIVCLQETKVTRDALTEPL 60 Query: 48 ETLQSLN-YHIETCGQKSYNGVAILSKYQPIEI---------------VTHLPGDDLDVQ 91 ++ N Y + + Y+GVA K + G+ + Sbjct: 61 AIVEGYNSYFSFSRNRSGYSGVATFCKDSATPVAAEEGLSGLFATQNGDVGCYGNMDEFT 120 Query: 92 A---------------RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 + T+ +TL + N+Y PH +P + K+ + + Sbjct: 121 QEELRALDSEGRALLTQHKIRTWEGKERTLTLINVYCPHADPGRPERLVFKMRFYRLLQI 180 Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTD--- 193 A L +I GD N +P D ++ + + L N+G Sbjct: 181 RAEALLAAGSHVIILGDLNTAHRPIDHWDSV-NLECFEEDPGRKWMDGLLSNLGCQSASH 239 Query: 194 -------AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT-SLLHSARIDTKP 245 ++ W + N G RID+++ ++ + + Sbjct: 240 VGPFIDSYRCFQPKQEGAFTCWSAVTGARHLNYGSRIDYVLGDRTLVIDTFQASFLLPEV 299 Query: 246 RGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 G SDH PV L + KQ S P Sbjct: 300 MG----SDHCPVGAVLSVSSVPAKQCPSLCTRFLP 330 >gi|92115320|ref|YP_575248.1| exodeoxyribonuclease III [Chromohalobacter salexigens DSM 3043] gi|91798410|gb|ABE60549.1| exodeoxyribonuclease III [Chromohalobacter salexigens DSM 3043] Length = 255 Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats. Identities = 54/266 (20%), Positives = 108/266 (40%), Gaps = 19/266 (7%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60 + +A+ NVN IR + W+ + D++C+Q K + L Y + Sbjct: 1 MKIASINVNGIREAVGRGFLDWLANQDADVVCVQNLKAKSFELDDSILFPEGYEGYFLDA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + ++GV + + P I+ L D +ARF++A + I + +P G+ Sbjct: 61 EEDGFSGVGLYCRTIPKAIMYGLGFPQCDNEARFLQADYE----RFSIASFLMPDGS--- 113 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K +++ ++ + S+ + I G ++I + D N + F E R Sbjct: 114 --DLEAKQAFMNQYQEYLSKMVRKRREYIICGTWHIAHKTIDLANWADNQTTPGFRPEER 171 Query: 181 QSFQKLQN-MGFTDAIRATHDTHHLYSFWDYYADS--WSKNKGIRIDHIMLSPEATSLLH 237 ++ MG+ D R + + Y++W ++ +G R+D+ ++ PE + Sbjct: 172 AWMDQVFGPMGYIDTFREVNRDANQYTWWPKLDQDVPRARQEGWRLDYQIVGPEFRRHVV 231 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263 A ID P+IV D+ Sbjct: 232 DAWIDRDATFSEF----APLIVEYDL 253 >gi|296470685|gb|DAA12800.1| DNA-(apurinic or apyrimidinic site) lyase 2 [Bos taurus] Length = 514 Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats. Identities = 56/335 (16%), Positives = 103/335 (30%), Gaps = 62/335 (18%) Query: 3 VVTVATWNVNSIRARIHNLA-------------AWIKENNPDIICLQETKTEDKNF--PF 47 ++ + +WN+N IR+ + + + + + DI+CLQETK P Sbjct: 1 MLRLVSWNINGIRSPLQGVRCEEPSSCSAMAMGRILDKLDADIVCLQETKVTRDVLTEPL 60 Query: 48 ETLQSLN-YHIETCGQKSYNGVAILSKYQPIEI---------------VTHLPGDDLDVQ 91 ++ N Y + + Y+GVA K + G+ D Sbjct: 61 AIIEGYNSYFSFSRNRSGYSGVATFCKDSATPVAAEEGLSGLLSTQNGDVGCYGNMDDFT 120 Query: 92 A---------------RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 + T+ +TL + N+Y PH +P + K+ + + Sbjct: 121 QEELRALDSEGRALLTQHKICTWEGKEKTLTLINVYCPHADPGKPERLTFKMRFYRLLQI 180 Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF----------QKL 186 A L +I GD N +P D ++ + + Sbjct: 181 RAEALLAAGSHVIILGDLNTAHRPIDHWD-AVNMECFEEDPGRKWMDGLLSNLGCESGSH 239 Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT-SLLHSARIDTKP 245 ++ W + + N G R+D+++ S+ + + Sbjct: 240 MGPFIDSYRCFQPKQKGAFTCWSTVSGARHLNYGSRLDYVLGDRTLVIDTFQSSFLLPEV 299 Query: 246 RGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 G SDH PV L + KQ P Sbjct: 300 MG----SDHCPVGAVLSVSSVPAKQCPPLCTCFLP 330 >gi|61554419|gb|AAX46554.1| apurinic/apyrimidinic endonuclease 2 [Bos taurus] Length = 407 Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats. Identities = 56/335 (16%), Positives = 103/335 (30%), Gaps = 62/335 (18%) Query: 3 VVTVATWNVNSIRARIHNLA-------------AWIKENNPDIICLQETKTEDKNF--PF 47 ++ + +WN+N IR+ + + + + + DI+CLQETK P Sbjct: 1 MLRLVSWNINGIRSPLQGVRCEEPSSCSAMAMGRILDKLDADIVCLQETKVTRDVLTEPL 60 Query: 48 ETLQSLN-YHIETCGQKSYNGVAILSKYQPIEI---------------VTHLPGDDLDVQ 91 ++ N Y + + Y+GVA K + G+ D Sbjct: 61 AIIEGYNSYFSFSRNRSGYSGVATFCKDSATPVAAEEGLSGLLSTQNGDVGCYGNMDDFT 120 Query: 92 A---------------RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 + T+ +TL + N+Y PH +P + K+ + + Sbjct: 121 QEELRALDSEGRALLTQHKICTWEGKEKTLTLINVYCPHADPGKPERLTFKMRFYRLLQI 180 Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF----------QKL 186 A L +I GD N +P D ++ + + Sbjct: 181 RAEALLAAGSHVIILGDLNTAHRPIDHWD-AVNMECFEEDPGRKWMDGLLSNLGCESGSH 239 Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT-SLLHSARIDTKP 245 ++ W + + N G R+D+++ S+ + + Sbjct: 240 MGPFIDSYRCFQPKQKGAFTCWSTVSGARHLNYGSRLDYVLGDRTLVIDTFQSSFLLPEV 299 Query: 246 RGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 G SDH PV L + KQ P Sbjct: 300 MG----SDHCPVGAVLSVSSVPAKQCPPLCTCFLP 330 >gi|62751813|ref|NP_001015577.1| DNA-(apurinic or apyrimidinic site) lyase 2 [Bos taurus] gi|73921675|sp|Q5E9N9|APEX2_BOVIN RecName: Full=DNA-(apurinic or apyrimidinic site) lyase 2; AltName: Full=APEX nuclease 2; AltName: Full=Apurinic-apyrimidinic endonuclease 2; Short=AP endonuclease 2 gi|59858127|gb|AAX08898.1| apurinic/apyrimidinic endonuclease 2 [Bos taurus] Length = 514 Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats. Identities = 56/335 (16%), Positives = 103/335 (30%), Gaps = 62/335 (18%) Query: 3 VVTVATWNVNSIRARIHNLA-------------AWIKENNPDIICLQETKTEDKNF--PF 47 ++ + +WN+N IR+ + + + + + DI+CLQETK P Sbjct: 1 MLRLVSWNINGIRSPLQGVRCEEPSSCSAMAMGRILDKLDADIVCLQETKVTRDVLTEPL 60 Query: 48 ETLQSLN-YHIETCGQKSYNGVAILSKYQPIEI---------------VTHLPGDDLDVQ 91 ++ N Y + + Y+GVA K + G+ D Sbjct: 61 AIIEGYNSYFSFSRNRSGYSGVATFCKDSATPVAAEEGLSGLLSTQNGDVGCYGNMDDFT 120 Query: 92 A---------------RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 + T+ +TL + N+Y PH +P + K+ + + Sbjct: 121 QEELRALDSEGRALLTQHKICTWEGKEKTLTLINVYCPHADPGKPERLTFKMRFYRLLQI 180 Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF----------QKL 186 A L +I GD N +P D ++ + + Sbjct: 181 RAEALLAAGSHVIILGDLNTAHRPIDHWD-AVNMECFEEDPGRKWMDGLLSNLGCESGSH 239 Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT-SLLHSARIDTKP 245 ++ W + + N G R+D+++ S+ + + Sbjct: 240 MGPFIDSYRCFQPKQKGAFTCWSTVSGARHLNYGSRLDYVLGDRTLVIDTFQSSFLLPEV 299 Query: 246 RGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 G SDH PV L + KQ P Sbjct: 300 MG----SDHCPVGAVLSVSSVPAKQCPPLCTCFLP 330 >gi|254515845|ref|ZP_05127905.1| exodeoxyribonuclease III [gamma proteobacterium NOR5-3] gi|219675567|gb|EED31933.1| exodeoxyribonuclease III [gamma proteobacterium NOR5-3] Length = 253 Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats. Identities = 61/264 (23%), Positives = 102/264 (38%), Gaps = 15/264 (5%) Query: 4 VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + +++ + +R A W+ + D IC+Q+ + + + + +Y+ Sbjct: 1 MRIISFSADGLREAAKRGFYDWLARQDADFICIQDIRCSEYDLQDDVFFPSDYNAYFFDD 60 Query: 62 -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 NGVAI + P I+T L D D+Q R+I+A + L IG L P + Sbjct: 61 VNGKDNGVAIYCRTLPKAIMTGLGFADFDMQGRYIQADYG----ELSIGCLLAPVASDGN 116 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + + K + + + G++ I D N N + F E R Sbjct: 117 ADEQTTKNEFFSLLGAHLEKVRNKRRKFVICGNWRIAHTAADMQNSAENSNRSGFLPEER 176 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 Q +L + G+ DA R Y++W G RID ++S E + A Sbjct: 177 QWIDELLDSGYRDAFRQVSTDSDAYTYWPRERG----EDGWRIDLQIISEELQYSVEHAA 232 Query: 241 IDTKPRGWTKPSDHTPVIVSLDIP 264 I T S H PVI+ DI Sbjct: 233 IYT----GESFSRHAPVIIDYDID 252 >gi|330964254|gb|EGH64514.1| exodeoxyribonuclease III [Pseudomonas syringae pv. actinidiae str. M302091] Length = 259 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 62/264 (23%), Positives = 106/264 (40%), Gaps = 13/264 (4%) Query: 4 VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60 + + + NVN I+ A L +W++ N D+ICLQ+T+ Q Y + Sbjct: 1 MRIISVNVNGIQGAVERGLLSWLQAQNADVICLQDTRASAFELDDPAFQLDGYFLYAYEA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + GVA+ S+ QP +++ L + D R+++A F + L Sbjct: 61 EVPAQGGVALYSRLQPKAVISGLGFETADRYGRYLQADFDKVSI-----ATLLFPSGMNG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF-TLEV 179 + K + F ++ ++ I+ G + Q D N + F E Sbjct: 116 DEDLNQKFKLMDDFGKYMDKQRRKRREYIYCGSLYVAQQKLDIKNWRDSQQSPGFLAPER 175 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + + MG+ DA+R YS+W + N G R D+ +L+P + SA Sbjct: 176 AWMDEIVGTMGYVDALREVSREGDQYSWWPDNEQAEMLNLGWRFDYQILTPGLRRFVRSA 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 R+ +PR S H P+IV D Sbjct: 236 RLPRQPR----FSQHAPLIVDYDW 255 >gi|311114963|ref|YP_003986184.1| exodeoxyribonuclease III [Gardnerella vaginalis ATCC 14019] gi|310946457|gb|ADP39161.1| exodeoxyribonuclease III [Gardnerella vaginalis ATCC 14019] Length = 290 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 56/291 (19%), Positives = 98/291 (33%), Gaps = 29/291 (9%) Query: 1 MSVV-TVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 M ++ T+ T N+N IRA + W++++ PD+ C+QE + + + + Sbjct: 1 MELMITITTSNLNGIRAAWRKGMLDWVQDHTPDVWCMQEVRAPQDAIDPIMSKIKDLYTS 60 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT-------------------- 98 G+ N S I + G L +E Sbjct: 61 KSGESGQNDRRF-SVTNQICEIKGRAGVALVTTLPVVEQRYGLPGLSEDVDSGRWVETDV 119 Query: 99 FTINTQTLRIGNLYLPHGNPIT----STKYDDKISWIKRFLRFASQRLELEEPLIFAGDY 154 T + + ++Y+ GN K+ + +KR I GD+ Sbjct: 120 HTPQGYDITVASVYVHAGNVDDPQKMQQKFRFLDTMLKRLGELRDIAASGGNQAILCGDF 179 Query: 155 NIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYA 212 NI P D N E A F E R + N + D Y++W Sbjct: 180 NIAHTPLDIKNAKANEKSAGFLPEERAYIDRWINEYEFVDVMRMLAGDIQGPYTWWSQRG 239 Query: 213 DSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 ++ N G R+D+ +PE ID ++ SDH + + ++ Sbjct: 240 KAFDNNVGWRLDYQFATPEIAETACGFVIDRAQSYDSRWSDHAALNIKYNV 290 >gi|89093847|ref|ZP_01166793.1| catabolite repression control protein [Oceanospirillum sp. MED92] gi|89081977|gb|EAR61203.1| catabolite repression control protein [Oceanospirillum sp. MED92] Length = 255 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 57/264 (21%), Positives = 111/264 (42%), Gaps = 13/264 (4%) Query: 4 VTVATWNVNSI-RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC-- 60 + V T+N I +A + W+ + + D++C+Q+ + ++ E Y+ Sbjct: 1 MRVITFNAQGIEQATDNGFFDWMVQQDADVVCIQDLRAKEYQLDDERYHPEGYYPYFFDA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + Y+GVAI S+ P I+T L + D RFI+A F + + + + Sbjct: 61 WEDGYSGVAIYSRDIPKAIMTGLGFELCDQHGRFIQADFEHVSV-----SSFCVPSGLKS 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EV 179 +K ++ F+ ++ L IF G +I +P D N + + F E Sbjct: 116 EEAQAEKEQFMTDFMGHLNKTLRKRREFIFCGTTHIAHKPVDLSNWYANQTVSGFLPQER 175 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + MG+ DA R + +S+W Y + N+G R+D+ + + + +A Sbjct: 176 EWMAEIFDEMGYVDAFRQINKAERQFSWWPDYNRARKLNEGARLDYQITTANLRKNVKNA 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 ++ S+H P+I+ +I Sbjct: 236 QVYRDEM----FSEHAPLIIDYEI 255 >gi|120553484|ref|YP_957835.1| exodeoxyribonuclease III Xth [Marinobacter aquaeolei VT8] gi|120323333|gb|ABM17648.1| exodeoxyribonuclease III Xth [Marinobacter aquaeolei VT8] Length = 268 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 55/268 (20%), Positives = 97/268 (36%), Gaps = 12/268 (4%) Query: 4 VTVATWNVNSI-RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + V + +VN + +A W+ E + D++C+Q+ + L Y Sbjct: 1 MRVVSISVNGLEQAVEKGFFDWLAEQDADVVCVQDHRMRAYEIEDRNLIPEGYEAYFIDG 60 Query: 63 --KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG---- 116 + GV I +++ P I+ + D + RFI+A F + + L Sbjct: 61 ELNEHGGVGIYTRHFPKAIMYGFANEQADREGRFIQADFDKVSVACVLAPCALGREEELI 120 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN-DACF 175 T D K +++ F + L I + D + Sbjct: 121 GEDDLTVLDHKDEFMEAFGIHMQKTLRKRRQFILCANLQTAHHVTDASPLYHKTDFSGFL 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E + MG DA R + + +++W + K GIR+D+ +L+P Sbjct: 181 PHERAWLDRLFDEMGCIDAFREINKQSNQFTWWPEQTEGSRKKAGIRVDYHLLTPGIRKT 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + ID + R SDH PVI+ DI Sbjct: 241 IRDGWIDDETR----FSDHAPVIMDYDI 264 >gi|268569472|ref|XP_002640531.1| C. briggsae CBR-EXO-3 protein [Caenorhabditis briggsae] gi|187024770|emb|CAP36093.1| CBR-EXO-3 protein [Caenorhabditis briggsae AF16] Length = 290 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 72/266 (27%), Positives = 121/266 (45%), Gaps = 21/266 (7%) Query: 5 TVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH-----I 57 WNV +RA + + +KE PDI+ L ETK ++ +P E + + I Sbjct: 37 KFVCWNVAGLRACVKKSDFSEILKEQ-PDIVFLGETKCKE--WPNEIEEKFKDYSKTLVI 93 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 T Y GV +LSK P++I + + D R I A F + +G+ G Sbjct: 94 STEKNGGYAGVGMLSKVAPLKIHKGIGDPEFDTAGRLIIAEFV---EFFFVGSYVPNSGA 150 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND-ACFT 176 + + +K + L + + + +P+I+ GD N+ + D NP N A FT Sbjct: 151 KLVNL---EKRGRWEALLTEKLKSMTMTKPVIYGGDLNVAHEEIDLKNPESNRNKTAGFT 207 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 + R F ++ MGFTD R H Y+FW Y A++ K+ G R+D+ ++S + Sbjct: 208 DQERGWFTEMLEMGFTDTFRKMHPEEKKYTFWSYLANAREKDVGWRLDYYVVSDRIMEKV 267 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLD 262 + I + K SDH P+++ ++ Sbjct: 268 KKSEIMSDV----KGSDHAPIVLHIE 289 >gi|308234996|ref|ZP_07665733.1| putative exodeoxyribonuclease III [Gardnerella vaginalis ATCC 14018] Length = 287 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 55/288 (19%), Positives = 97/288 (33%), Gaps = 28/288 (9%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++T+ T N+N IRA + W++++ PD+ C+QE + + + + G Sbjct: 1 MITITTSNLNGIRAAWRKGMLDWVQDHTPDVWCMQEVRAPQDAIDPIMSKIKDLYTSKSG 60 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT--------------------FTI 101 + N S I + G L +E T Sbjct: 61 ESGQNDRRF-SVTNQICEIKGRAGVALVTTLPVVEQRYGLPGLSEDVDSGRWVETDVHTP 119 Query: 102 NTQTLRIGNLYLPHGNPIT----STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII 157 + + ++Y+ GN K+ + +KR I GD+NI Sbjct: 120 QGYDITVASVYVHAGNVDDPQKMQQKFRFLDTMLKRLGELRDIAASGGNQAILCGDFNIA 179 Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSW 215 P D N E A F E R + N + D Y++W ++ Sbjct: 180 HTPLDIKNAKANEKSAGFLPEERAYIDRWINEYEFVDVMRMLAGDIQGPYTWWSQRGKAF 239 Query: 216 SKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 N G R+D+ +PE ID ++ SDH + + ++ Sbjct: 240 DNNVGWRLDYQFATPEIAETACGFVIDRAQSYDSRWSDHAALNIKYNV 287 >gi|26991968|ref|NP_747393.1| exodeoxyribonuclease III Xth [Pseudomonas putida KT2440] gi|148550400|ref|YP_001270502.1| exodeoxyribonuclease III Xth [Pseudomonas putida F1] gi|167036327|ref|YP_001671558.1| exodeoxyribonuclease III Xth [Pseudomonas putida GB-1] gi|325272060|ref|ZP_08138497.1| exodeoxyribonuclease III Xth [Pseudomonas sp. TJI-51] gi|24987098|gb|AAN70857.1|AE016730_3 catabolite repression control protein [Pseudomonas putida KT2440] gi|148514458|gb|ABQ81318.1| exodeoxyribonuclease III Xth [Pseudomonas putida F1] gi|166862815|gb|ABZ01223.1| exodeoxyribonuclease III Xth [Pseudomonas putida GB-1] gi|324102806|gb|EGC00216.1| exodeoxyribonuclease III Xth [Pseudomonas sp. TJI-51] Length = 259 Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats. Identities = 62/264 (23%), Positives = 106/264 (40%), Gaps = 13/264 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + + NVN I+A L +W++ N D+ICLQ+T+ Q Y + C Sbjct: 1 MRIISVNVNGIQAAAERGLLSWLQAQNADVICLQDTRASAFELDDPAFQLDGYFLYACDA 60 Query: 62 -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + GVA+ S+ QP ++T L + D R+++A F + + Sbjct: 61 EVPAQGGVALYSRMQPKAVITGLGFETADRYGRYLQADFDKVSIASLL-----LPSGMNG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF-TLEV 179 + K + F ++ ++ I+ G + + Q D N + F E Sbjct: 116 DEDLNQKFKLMDDFAKYLDKQRRKRREYIYCGSFYVAQQKLDIKNWRDSQQSPGFLAPER 175 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 MG+ DA+R YS+W + N G R D+ +L+P + +A Sbjct: 176 AWMDAITGEMGYVDALREVSREGDQYSWWPDNEQAEMLNLGYRFDYQILTPGLRRFVRNA 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 R+ +PR S H P+IV D Sbjct: 236 RLPRQPR----FSQHAPLIVDYDW 255 >gi|313501266|gb|ADR62632.1| Crc [Pseudomonas putida BIRD-1] Length = 263 Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 62/264 (23%), Positives = 106/264 (40%), Gaps = 13/264 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + + NVN I+A L +W++ N D+ICLQ+T+ Q Y + C Sbjct: 5 MRIISVNVNGIQAAAERGLLSWLQAQNADVICLQDTRASAFELDDPAFQLDGYFLYACDA 64 Query: 62 -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + GVA+ S+ QP ++T L + D R+++A F + + Sbjct: 65 EVPAQGGVALYSRMQPKAVITGLGFETADRYGRYLQADFDKVSIASLL-----LPSGMNG 119 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF-TLEV 179 + K + F ++ ++ I+ G + + Q D N + F E Sbjct: 120 DEDLNQKFKLMDDFAKYLDKQRRKRREYIYCGSFYVAQQKLDIKNWRDSQQSPGFLAPER 179 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 MG+ DA+R YS+W + N G R D+ +L+P + +A Sbjct: 180 AWMDAITGEMGYVDALREVSREGDQYSWWPDNEQAEMLNLGYRFDYQILTPGLRRFVRNA 239 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 R+ +PR S H P+IV D Sbjct: 240 RLPRQPR----FSQHAPLIVDYDW 259 >gi|291239611|ref|XP_002739716.1| PREDICTED: apurinic/apyrimidinic endonuclease 2-like [Saccoglossus kowalevskii] Length = 541 Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 62/343 (18%), Positives = 98/343 (28%), Gaps = 70/343 (20%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPF--ETLQSLN-YHIETC 60 + + TWN+N IRA L + + DIICLQETK ++ N Y + Sbjct: 1 MRILTWNINGIRAAKKPLKSLLDSLEADIICLQETKVTRDQLDEANAVVEGYNSYFSFSK 60 Query: 61 GQKSYNGVAILSKYQPIE------------------IVTHLPGDDLDVQARFIEATFTIN 102 G++ Y+GVA +V + Sbjct: 61 GRQGYSGVATFCHNDFTPLAAEEGLSGILSSSAGNEVVGNYGNQTDFTDEELRSLDNEGR 120 Query: 103 --------------TQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPL 148 + + I N+Y P P + + K+ + L + Sbjct: 121 ALLSLHKIKSSAGKNEDVVIINVYCPRCEPDDQERLNFKLRFYSLLQTRCEALLSAGRHV 180 Query: 149 IFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS-------------------------- 182 I GD N+ + D + + ++ Sbjct: 181 IVVGDMNVSHKAIDHCDAAVNPTKPRQWMDQFLCKLSDMGEIIDKTSEVNHLIGAVGISP 240 Query: 183 ----FQKLQNMGFTDAIRATHDTHHL-YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 F D R H ++ W + N G RID+I+ S L Sbjct: 241 EKVSNYSQSTGSFVDTFRHFHPQQQEAFTCWRTTTGARQLNYGTRIDYILASMSLQVELL 300 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 + I G SDH PV V+L K+ + S P Sbjct: 301 DSIIMPNVEG----SDHCPVKVTLRCTCETSKKIPTLSTKHMP 339 >gi|260798967|ref|XP_002594471.1| hypothetical protein BRAFLDRAFT_124956 [Branchiostoma floridae] gi|229279705|gb|EEN50482.1| hypothetical protein BRAFLDRAFT_124956 [Branchiostoma floridae] Length = 561 Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 61/329 (18%), Positives = 98/329 (29%), Gaps = 56/329 (17%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + TWN+N +RA L + + DI+CLQETK + Y + Sbjct: 1 MRILTWNINGVRATKEPLKQVLDSLDADIVCLQETKVTRDQLDEASAIVEGYSSYFSFSR 60 Query: 64 SYNGVAILSKYQ--------------------PIEIVTHLPGDDLDVQ------------ 91 +G + ++ Y E + GD Sbjct: 61 VRSGYSGVATYCKDGATPIKAEEGLTGLLTNQKEEDIIGCYGDQTMFTEDELRLLDKEGR 120 Query: 92 ---ARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPL 148 + +L + N+Y P +P + D K+ + + A L+ + Sbjct: 121 AVITQHTIRDTDGKECSLAVINVYCPRADPEKEERKDFKLRFYRLLQTRAQALLQAGSHV 180 Query: 149 IFAGDYNIIPQPHDCYNP----IIWENDACFTLEVRQSFQKL------------QNMGFT 192 I GD N +P D +P EN L+ F Sbjct: 181 IVLGDVNTSHKPIDHCDPDDIEYFSENPGRKWLDQFLLDPHQTGDSGSSESEKGPGGYFV 240 Query: 193 DAIRATHDTHH-LYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP 251 D R H T ++ W + N G RID+I + + I + G Sbjct: 241 DTFRFFHPTQRSAFTCWSTVTGARQTNYGTRIDYIFANRALLNQFQDCTIMPEVEG---- 296 Query: 252 SDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 SDH PV L + + P Sbjct: 297 SDHCPVRGELACIVVASGKCPALCSKYMP 325 >gi|28867319|ref|NP_789938.1| exodeoxyribonuclease III [Pseudomonas syringae pv. tomato str. DC3000] gi|213970692|ref|ZP_03398817.1| exodeoxyribonuclease III [Pseudomonas syringae pv. tomato T1] gi|301382579|ref|ZP_07230997.1| exodeoxyribonuclease III Xth [Pseudomonas syringae pv. tomato Max13] gi|302063054|ref|ZP_07254595.1| exodeoxyribonuclease III Xth [Pseudomonas syringae pv. tomato K40] gi|302133598|ref|ZP_07259588.1| exodeoxyribonuclease III Xth [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28850553|gb|AAO53633.1| exodeoxyribonuclease III, putative [Pseudomonas syringae pv. tomato str. DC3000] gi|213924526|gb|EEB58096.1| exodeoxyribonuclease III [Pseudomonas syringae pv. tomato T1] gi|330876504|gb|EGH10653.1| exodeoxyribonuclease III [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|331018560|gb|EGH98616.1| exodeoxyribonuclease III, putative [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 259 Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 63/264 (23%), Positives = 107/264 (40%), Gaps = 13/264 (4%) Query: 4 VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + + NVN I+ A L +W++ N D+ICLQ+T+ Q Y + C Sbjct: 1 MRIISVNVNGIQGAVERGLLSWLQAQNADVICLQDTRASAFELDDPAFQLDGYFLYACEA 60 Query: 62 -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + GVA+ S+ QP +++ L + D R+++A F + L Sbjct: 61 EVPAQGGVALYSRLQPKAVISGLGFETADRYGRYLQADFDKVSI-----ATLLFPSGMNG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF-TLEV 179 + K + F ++ ++ I+ G + Q D N + F E Sbjct: 116 DEDLNQKFKLMDDFGKYMDKQRRKRREYIYCGSLYVAQQKLDIKNWRDSQQSPGFLAPER 175 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + + MG+ DA+R YS+W + N G R D+ +L+P + SA Sbjct: 176 AWMDEIVGTMGYVDALREVSREGDQYSWWPDNEQAEMLNLGWRFDYQILTPGLRRFVRSA 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 R+ +PR S H P+IV D Sbjct: 236 RLPRQPR----FSQHAPLIVDYDW 255 >gi|306835369|ref|ZP_07468390.1| possible exodeoxyribonuclease III [Corynebacterium accolens ATCC 49726] gi|304568735|gb|EFM44279.1| possible exodeoxyribonuclease III [Corynebacterium accolens ATCC 49726] Length = 297 Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 59/306 (19%), Positives = 103/306 (33%), Gaps = 55/306 (17%) Query: 1 MSVVTVATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 MS +T+A+ NVN IRA + AW+++ DI+ +QE + +L Sbjct: 1 MS-LTIASVNVNGIRAACKQRNENNPGMNAWLEQTPADIVLMQEVRATPDQATKALAPAL 59 Query: 54 --NYHIE--TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 +H+E K GV ILS+ ++ + +R+ Sbjct: 60 EAGWHLELADAAAKGRAGVGILSRTPLADVEIGFGSFTDAGRWIAATTRD------IRVA 113 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 +LYLP G+ + + + A ++ ++ GD+NI + D N Sbjct: 114 SLYLPSGDTDSPKLDEKYRFLDEFDSVLAENA---DKDMVIGGDWNICHRAQDLKNNKAN 170 Query: 170 ENDACFTLEVR----------------------------------QSFQKLQNMGFTDAI 195 E A E R F A Sbjct: 171 EKKAGHLPEERAFLDHVFGSFPDEAPQEKKNLGEWLGVVDYAGTTPWEPATAPQWFDVAR 230 Query: 196 RATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHT 255 R + Y++W Y +++ + G RID+ + +D P + SDH+ Sbjct: 231 RLQPEADGPYTWWTYRGQAFNNDAGWRIDYQAATQPLLDRAQRTWVDKAPTVEQRWSDHS 290 Query: 256 PVIVSL 261 P++V Sbjct: 291 PLLVEY 296 >gi|319442911|ref|ZP_07992067.1| putative exodeoxyribonuclease [Corynebacterium variabile DSM 44702] Length = 327 Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 64/326 (19%), Positives = 110/326 (33%), Gaps = 66/326 (20%) Query: 1 MSVVTVATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 MS +TVAT NVN IRA + W+ DI+ LQE + + +L Sbjct: 4 MS-LTVATVNVNGIRAAAKQRNELNHGILPWLDATPADIVLLQEVRATPEQTEATLAPAL 62 Query: 54 --NYHI--ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 +H+ K GVA+LS+ + ++ + T + + Sbjct: 63 ASGWHLAQAEAAAKGRAGVAVLSRARIDDVQVGFDELPGAEEFGDAGRWIEAKTAGITVA 122 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 ++YLP G + K D+K ++ + + R E ++ GD+NI + D N Sbjct: 123 SVYLPSG-AENTAKQDEKYRFLDVLGPYLANRAASGEEMVVGGDWNICHRRADLKNWRPN 181 Query: 170 ENDACFTLEVRQSFQK-------------------------------------------- 185 + F + R Sbjct: 182 RKKSGFLPDERAFMDSLLGTFPDASTQVGDATDAGRNGNPAGGVGDFFGAVDYTPGRVAQ 241 Query: 186 -------LQNMGFTDAIRATHDTHH--LYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 + + D +R H YS+W + ++ G RID+ + S Sbjct: 242 ARVAGGAPGDPQWFDVLRQLHADEEEGPYSWWTWRGKAFDTGAGWRIDYQIASRPLFERA 301 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLD 262 +A +D P + SDH+PV+V + Sbjct: 302 VAAWVDKAPDYDLRWSDHSPVLVEYN 327 >gi|170719367|ref|YP_001747055.1| exodeoxyribonuclease III Xth [Pseudomonas putida W619] gi|169757370|gb|ACA70686.1| exodeoxyribonuclease III Xth [Pseudomonas putida W619] Length = 259 Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 62/264 (23%), Positives = 107/264 (40%), Gaps = 13/264 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + + NVN I+A L +W++ N D+ICLQ+T+ Q Y + C Sbjct: 1 MRIISVNVNGIQAAAERGLLSWLQAQNADVICLQDTRASAFELDDPAFQLDGYFLYACDA 60 Query: 62 -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + GVA+ S+ QP ++T L + D R+++A F + + Sbjct: 61 EVPAQGGVALYSRMQPKAVITGLGFETADRYGRYLQADFDKVSIASLL-----LPSGMNG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF-TLEV 179 + K + F ++ ++ I+ G + + Q D N + F E Sbjct: 116 DDDLNQKFKLMDDFAKYLDKQRRKRREYIYCGSFYVAQQKLDIKNWRDSQQSPGFLPPER 175 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 +MG+ DA+R YS+W + N G R D+ +L+P + +A Sbjct: 176 AWMDAITGDMGYVDALREVSREGDQYSWWPDNEQAEMLNLGYRFDYQILTPGLRRFVRNA 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 R+ +PR S H P+IV D Sbjct: 236 RLPRQPR----FSQHAPLIVDYDW 255 >gi|55741922|ref|NP_001006804.1| APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Xenopus (Silurana) tropicalis] gi|49903339|gb|AAH76676.1| APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Xenopus (Silurana) tropicalis] Length = 517 Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 67/330 (20%), Positives = 108/330 (32%), Gaps = 57/330 (17%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNF--PFETLQSLN-YHIETC 60 + + +WN+N IRA L + + DIICLQETK P ++ N Y + Sbjct: 1 MKIVSWNINGIRATRVGLKETLDSLDADIICLQETKVTRDLLDEPSAIVEGYNSYFSFSR 60 Query: 61 GQKSYNGVAILSKYQ------------PIEIVTHLPGDDLDVQ----------------- 91 G+ Y+GVA K + T G + + Sbjct: 61 GRSGYSGVATFCKSSTTPWAAEEGLSGMLCNHTGSIGCYGNTEEFLEEELQSLDQEGRAV 120 Query: 92 -ARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIF 150 + +TL + N+Y P +P + K+ + + A L+ +I Sbjct: 121 LTQHRIRNCEGKEETLTVINVYCPRADPEKPERKTYKLRFYRLLQTRAEAILQKGGHVII 180 Query: 151 AGDYNIIPQPHDCYNP-----------IIWENDACFTLEVRQS-------FQKLQNMGFT 192 GD N +P D +P W N Q + F Sbjct: 181 LGDVNTSHRPLDHCDPTDLETFEENPGRQWLNQFLGDPVPSQKGDSETGTPPSGGSGRFY 240 Query: 193 DAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL-LHSARIDTKPRGWTK 250 D+ R H T + ++ W + + N G RID+I+ + E + I + G Sbjct: 241 DSFRYFHPTQRNAFTCWCSASGARQTNYGTRIDYILGNSELVEREFLDSIIMPEVEG--- 297 Query: 251 PSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 SDH PV + + P Sbjct: 298 -SDHCPVKAVMKCRPIAANKCPPLCTKYLP 326 >gi|109499818|ref|XP_223499.3| PREDICTED: APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Rattus norvegicus] gi|109500734|ref|XP_001059968.1| PREDICTED: APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Rattus norvegicus] Length = 516 Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 60/335 (17%), Positives = 104/335 (31%), Gaps = 63/335 (18%) Query: 3 VVTVATWNVNSIRARIHNL------------AAWIKENNPDIICLQETKTEDKNFPFETL 50 ++ V +WN+N IR + L ++E + DI+CLQETK Sbjct: 1 MLRVVSWNINGIRRPLQGLGCEVTSNCPTALRHILRELDADIVCLQETKVSRDALTEPLA 60 Query: 51 QSLNYHIETCGQKSYNGVAILSKYQPIEI------------------VTHLPGDDLDVQA 92 Y+ +S +G + ++ + + G+ + Sbjct: 61 VVEGYNSYFSFSRSRSGYSGVATFCKDSVTPVAAEEGLSGQFATLSGHVGCYGNMNEFTQ 120 Query: 93 ---------------RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF 137 + T + L + N+Y PH +P + K+ + + Sbjct: 121 EQLRALDSEGRALLTQHKICTQEGKEKPLTLINVYCPHASPGNHERLTFKMRFYRLLQIR 180 Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCYNP-----------IIWENDACFTLEVRQSFQKL 186 A L +I GD N P D N W + LE Sbjct: 181 AEALLAAGSHVIILGDINTAHHPIDHCNAGNLECFEEDLGRRWMDGLLSNLEYPAGSHIG 240 Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA-TSLLHSARIDTKP 245 M ++ W + + S N G R+D+I+ + + L A + + Sbjct: 241 PFMDSYRYF--YPKQERAFTCWSMISGARSLNYGTRLDYILGNRDLIIDTLQDAFLLPEV 298 Query: 246 RGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 G SDH PV L++ KQ + P Sbjct: 299 MG----SDHCPVGAVLNVSCVPAKQCPALCTRFLP 329 >gi|149047282|gb|EDL99951.1| rCG36041 [Rattus norvegicus] Length = 485 Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 60/335 (17%), Positives = 104/335 (31%), Gaps = 63/335 (18%) Query: 3 VVTVATWNVNSIRARIHNL------------AAWIKENNPDIICLQETKTEDKNFPFETL 50 ++ V +WN+N IR + L ++E + DI+CLQETK Sbjct: 1 MLRVVSWNINGIRRPLQGLGCEVTSNCPTALRHILRELDADIVCLQETKVSRDALTEPLA 60 Query: 51 QSLNYHIETCGQKSYNGVAILSKYQPIEI------------------VTHLPGDDLDVQA 92 Y+ +S +G + ++ + + G+ + Sbjct: 61 VVEGYNSYFSFSRSRSGYSGVATFCKDSVTPVAAEEGLSGQFATLSGHVGCYGNMNEFTQ 120 Query: 93 ---------------RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF 137 + T + L + N+Y PH +P + K+ + + Sbjct: 121 EQLRALDSEGRALLTQHKICTQEGKEKPLTLINVYCPHASPGNHERLTFKMRFYRLLQIR 180 Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCYNP-----------IIWENDACFTLEVRQSFQKL 186 A L +I GD N P D N W + LE Sbjct: 181 AEALLAAGSHVIILGDINTAHHPIDHCNAGNLECFEEDLGRRWMDGLLSNLEYPAGSHIG 240 Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA-TSLLHSARIDTKP 245 M ++ W + + S N G R+D+I+ + + L A + + Sbjct: 241 PFMDSYRYF--YPKQERAFTCWSMISGARSLNYGTRLDYILGNRDLIIDTLQDAFLLPEV 298 Query: 246 RGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 G SDH PV L++ KQ + P Sbjct: 299 MG----SDHCPVGAVLNVSCVPAKQCPALCTRFLP 329 >gi|227499267|ref|ZP_03929379.1| exodeoxyribonuclease III [Anaerococcus tetradius ATCC 35098] gi|227218676|gb|EEI83907.1| exodeoxyribonuclease III [Anaerococcus tetradius ATCC 35098] Length = 273 Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 63/281 (22%), Positives = 102/281 (36%), Gaps = 31/281 (11%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTED-------KNFP 46 + +WN++S+ A + ++ IK + DII LQETK K Sbjct: 1 MKFISWNIDSLNAALTSDSARAKLSRDVLDTIKNEDADIIALQETKLPATGPSKKHKEKL 60 Query: 47 FETLQSLNYHIETCG---QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 FE +Y + +KSY G L K + D Sbjct: 61 FEFFPDYDYFWVSSRDSARKSYAGTMTLYKKGLKVKESFPEIGAPDTMDLEGRILTLELD 120 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 + G + + + L+ +P+I GD+N+ + D Sbjct: 121 DYYFVQVYTPNAGGELNRLPLREIWDLKFADY---LEELDKIKPVIATGDFNVAHEEIDL 177 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYAD-SWSKNKGI 221 +P A FT E R+ F L N GFTD+ R + Y++W S N G Sbjct: 178 AHPENNHMSAGFTDEERRGFTNLLNRGFTDSFRYLNKDLEGAYTWWAQRVKTSKINNSGW 237 Query: 222 RIDHIMLSPEATSLLHSA-RIDTKPRGWTKPSDHTPVIVSL 261 RID+ ++S + + ID+ R DHTP+++ + Sbjct: 238 RIDYFLVSDRLIDKVKDSTMIDSGQRQ-----DHTPIMLEI 273 >gi|104784334|ref|YP_610832.1| catabolite repression control protein Crc [Pseudomonas entomophila L48] gi|95113321|emb|CAK18049.1| putative catabolite repression control protein Crc [Pseudomonas entomophila L48] Length = 259 Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats. Identities = 63/264 (23%), Positives = 107/264 (40%), Gaps = 13/264 (4%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + + NVN I+A L +W++ N D+ICLQ+T+ Q Y + C Sbjct: 1 MRIISVNVNGIQAAAERGLLSWLQAQNADVICLQDTRASAFELDDPAFQLDGYFLYACDA 60 Query: 62 -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + GVA+ S+ QP ++T L + D R+++A F + L Sbjct: 61 EVPTQGGVALYSRMQPKAVITGLGFETADRYGRYLQADFDKVS-----IATLLLPSGMNG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF-TLEV 179 + K + F ++ ++ I+ G + + Q D N + F E Sbjct: 116 DDDLNQKFKLMDDFAKYLDKQRRKRREYIYCGSFYVAQQKLDIKNWRDSQQSVGFLPPER 175 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 +MG+ DA+R YS+W + N G R D+ +L+P + +A Sbjct: 176 AWMDAITGDMGYVDALREVSREGDQYSWWPDNEQAEMLNLGYRFDYQILTPGLRRFVRNA 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 R+ +PR S H P+IV D Sbjct: 236 RLPRQPR----FSRHAPLIVDYDW 255 >gi|297735011|emb|CBI17373.3| unnamed protein product [Vitis vinifera] Length = 400 Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats. Identities = 57/352 (16%), Positives = 97/352 (27%), Gaps = 75/352 (21%) Query: 4 VTVATWNVNSIRARIHNL---AAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 + + T+NVN +R RI ++ + DIIC+QETK + + + Y Sbjct: 1 MKIVTYNVNGLRPRISQFGSLLKFLSSLDADIICVQETKLSRHELTADVVMADGYESFFS 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT---------------------- 98 ++ + + +V Sbjct: 61 CTRTNSKGRVGYSGVATFCRVKSAFSSTEVALPIAAEEGFTGLLEKSGGFGTGKDEIPVK 120 Query: 99 ---------------------FTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF 137 + + N+Y P + + + K ++ + + Sbjct: 121 AEGLEEFAKDELLKVDSEGRCIITDHGHFVLFNIYGPRADSEDTERIQFKHTFFQILQKR 180 Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA 197 + + GD NI P D + F R + F Sbjct: 181 WETLQQQGRRIFVVGDLNIAPAAIDRCDAGPDFEKNEFRRWFRSMLVECGGPFFDVFRAK 240 Query: 198 THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE-------ATSL------LHSARIDTK 244 D Y+ W + N G RIDHI+ S + I T+ Sbjct: 241 HPDRREAYTCWSSSTGAEEFNYGSRIDHILSSGSCLHQDHCLQDRIFVTCHVKECDILTQ 300 Query: 245 PRGWT---------------KPSDHTPVIVSL-DIPEPRKKQQDSTSQNMKP 280 + W + SDH PV +SL DIP+ + S S P Sbjct: 301 FKRWKPGNKPRWKGGRSIKLEGSDHAPVFMSLMDIPDVAQHSTPSLSARYVP 352 >gi|225431130|ref|XP_002265926.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 625 Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats. Identities = 57/352 (16%), Positives = 97/352 (27%), Gaps = 75/352 (21%) Query: 4 VTVATWNVNSIRARIHNL---AAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 + + T+NVN +R RI ++ + DIIC+QETK + + + Y Sbjct: 1 MKIVTYNVNGLRPRISQFGSLLKFLSSLDADIICVQETKLSRHELTADVVMADGYESFFS 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT---------------------- 98 ++ + + +V Sbjct: 61 CTRTNSKGRVGYSGVATFCRVKSAFSSTEVALPIAAEEGFTGLLEKSGGFGTGKDEIPVK 120 Query: 99 ---------------------FTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF 137 + + N+Y P + + + K ++ + + Sbjct: 121 AEGLEEFAKDELLKVDSEGRCIITDHGHFVLFNIYGPRADSEDTERIQFKHTFFQILQKR 180 Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA 197 + + GD NI P D + F R + F Sbjct: 181 WETLQQQGRRIFVVGDLNIAPAAIDRCDAGPDFEKNEFRRWFRSMLVECGGPFFDVFRAK 240 Query: 198 THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE-------ATSL------LHSARIDTK 244 D Y+ W + N G RIDHI+ S + I T+ Sbjct: 241 HPDRREAYTCWSSSTGAEEFNYGSRIDHILSSGSCLHQDHCLQDRIFVTCHVKECDILTQ 300 Query: 245 PRGWT---------------KPSDHTPVIVSL-DIPEPRKKQQDSTSQNMKP 280 + W + SDH PV +SL DIP+ + S S P Sbjct: 301 FKRWKPGNKPRWKGGRSIKLEGSDHAPVFMSLMDIPDVAQHSTPSLSARYVP 352 >gi|296120099|ref|ZP_06838653.1| putative exodeoxyribonuclease [Corynebacterium ammoniagenes DSM 20306] gi|295967253|gb|EFG80524.1| putative exodeoxyribonuclease [Corynebacterium ammoniagenes DSM 20306] Length = 302 Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats. Identities = 65/310 (20%), Positives = 114/310 (36%), Gaps = 56/310 (18%) Query: 1 MSVVTVATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 MS +T+A+ NVN IRA + AW++E + DI+ +QE + SL Sbjct: 1 MS-LTIASVNVNGIRAACKQRNELNPGMNAWLEETSADIVLMQEVRANPAQTELALKPSL 59 Query: 54 --NYHIE-----TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 +H+ T G K GV ILS+ ++ + + Sbjct: 60 EAGWHLAMADALTPGAKGRAGVGILSRTPLTDVEIGFGSFLESGRW------IEATAAGV 113 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 R+ +LYLP G+ + S K D+K +++ F +R ++ GD+NI + D N Sbjct: 114 RVASLYLPSGD-VNSPKLDEKYNFLDEFAGVLEKRAAEHTDMVIGGDWNICHRAQDLKNN 172 Query: 167 IIWENDACFTLEVRQSFQKLQNM----------------------------------GFT 192 E + E R + F Sbjct: 173 KPNEKKSGHLPEERAFMDHVFGAFPDAHAQEKKGLGDWLGIVDYETKTNWQPTEDPKWFD 232 Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPS 252 A R + Y++W Y +++ + G RID+ + + ++ P + S Sbjct: 233 VARRLEPEAEGPYTWWTYRGQAFNNDAGWRIDYQAATDSMLQRAQRSWVEKAPSVEERWS 292 Query: 253 DHTPVIVSLD 262 DH+P++V + Sbjct: 293 DHSPLMVEYN 302 >gi|165932926|ref|YP_001649715.1| exodeoxyribonuclease III [Rickettsia rickettsii str. Iowa] gi|165908013|gb|ABY72309.1| exodeoxyribonuclease III [Rickettsia rickettsii str. Iowa] Length = 261 Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats. Identities = 73/258 (28%), Positives = 113/258 (43%), Gaps = 7/258 (2%) Query: 15 RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKSYNGVAILSK 73 R RI L E+ PDII LQETK D FP E ++++ Y H+ GQKSYNGVAI+SK Sbjct: 2 RLRIDLLRKLAYEHQPDIILLQETKVADSLFPLEVIKNIGYEHVIYSGQKSYNGVAIISK 61 Query: 74 YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKR 133 + + + + + I+ + + +TK+ K+ +I+ Sbjct: 62 FPLNNVFSLELYNSDKRHIAAMVNDIEIHNFYV---PAGGDIPDIEVNTKFKHKLEYIRL 118 Query: 134 FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN--MGF 191 + + + +I GD NI P HD ++ N T R +LQN Sbjct: 119 MQEWLTTNRTKNDKMIIVGDLNIAPHEHDVWSSKQLRNVISHTDIERSLLVELQNALGFI 178 Query: 192 TDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 + Y++W Y W K N+G R+DHI +S L S + ++ R W Sbjct: 179 DSSRHFVSLDEKFYTWWSYRNIDWKKSNRGRRLDHIWVSDNLKGALFSMHLLSEARDWFS 238 Query: 251 PSDHTPVIVSLDIPEPRK 268 PSDH P V+ ++ + Sbjct: 239 PSDHVPYFVTFNLQMSSR 256 >gi|260663817|ref|ZP_05864702.1| exodeoxyribonuclease III [Lactobacillus fermentum 28-3-CHN] gi|260551578|gb|EEX24765.1| exodeoxyribonuclease III [Lactobacillus fermentum 28-3-CHN] Length = 279 Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats. Identities = 61/284 (21%), Positives = 106/284 (37%), Gaps = 29/284 (10%) Query: 4 VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTED-------KNFP 46 + +WN++SI A + + IK PD+I +QETK + Sbjct: 1 MRFISWNIDSINAALTGTSARAEETRAVLEKIKAAAPDVIAIQETKLSKSGPTKKHQGVL 60 Query: 47 FETLQSLN--YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 E + + + + + P T+ + Sbjct: 61 AELFAGYTVVWRSSVEPARKGYAGTMYLYKESLTPKVTYPTIGAPEPMDEEGRIITLEFK 120 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 + +Y P+ + + R L+ ++P+I +GD+N+ + D Sbjct: 121 NFYLTEVYTPNSGTGLKRLAERQEWD--DRYREYLTELDRQKPVIASGDFNVAHEEIDLA 178 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYA-DSWSKNKGIR 222 +P + A FT E R+ F L GFTD+ R+ H YS+W A S N G R Sbjct: 179 HPANNHHSAGFTDEEREKFTALLAAGFTDSFRSLHPDETGAYSWWAQRAVTSKVNNSGWR 238 Query: 223 IDHIMLSPEATSLLHSA-RIDTKPRGWTKPSDHTPVIVSLDIPE 265 ID+ ++S + S+ ID+ R DH P+ + ++IP Sbjct: 239 IDYWLVSDRLADQVVSSTMIDSGERR-----DHAPIQLDINIPA 277 >gi|213964825|ref|ZP_03393024.1| exonuclease III [Corynebacterium amycolatum SK46] gi|213952361|gb|EEB63744.1| exonuclease III [Corynebacterium amycolatum SK46] Length = 318 Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats. Identities = 59/318 (18%), Positives = 98/318 (30%), Gaps = 58/318 (18%) Query: 1 MSVVTVATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKNFPFETLQ-- 51 MS +T+AT NVN IRA + L W+K + D++ LQE + D Sbjct: 1 MS-LTIATINVNGIRAAVKERSETNLGLLEWLKHTSSDVVLLQEVRATDDQACKALAPAF 59 Query: 52 SLNYHIETCGQ---KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFI------EATFTIN 102 +H K GV ILS++ ++ + ++ + RFI T Sbjct: 60 DAGWHWVGAENLGAKGRAGVGILSRFPLNDVQVGIGSEEFEESGRFISGVAPAADTGLDA 119 Query: 103 TQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD 162 + L + + +L + + GD+NI + D Sbjct: 120 DVQIASLYLPSGAALSEKQDEKYRFLDAFSDYLADLGAKGRDGHHAVIGGDWNICHREQD 179 Query: 163 CYNPIIWENDACFTLEVRQSFQKLQNMG-------------------------------- 190 N + F + R + Sbjct: 180 LKNWKTNRRKSGFLPQERAWMDSVFGCWPDEVPQDSQVQASDKELESGTFSDGSVWEAPA 239 Query: 191 ------FTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + D R H +S+W Y ++ + G RID+ + SA +D Sbjct: 240 LNADPVWFDVTRRLHPEADGPWSWWTYRGKAFDTDAGWRIDYQAATEPMLKRAVSAVVDK 299 Query: 244 KPRGWTKPSDHTPVIVSL 261 + +DH PVIV Sbjct: 300 PATYDLRWTDHAPVIVEY 317 >gi|184154634|ref|YP_001842974.1| exodeoxyribonuclease [Lactobacillus fermentum IFO 3956] gi|227513882|ref|ZP_03943931.1| exodeoxyribonuclease III [Lactobacillus fermentum ATCC 14931] gi|183225978|dbj|BAG26494.1| exodeoxyribonuclease [Lactobacillus fermentum IFO 3956] gi|227087743|gb|EEI23055.1| exodeoxyribonuclease III [Lactobacillus fermentum ATCC 14931] Length = 279 Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats. Identities = 61/284 (21%), Positives = 106/284 (37%), Gaps = 29/284 (10%) Query: 4 VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTED-------KNFP 46 + +WN++SI A + + IK PD+I +QETK + Sbjct: 1 MRFISWNIDSINAALTGTSARAEETRAVLEKIKAAAPDVIAIQETKLSKSGPTKKHQGVL 60 Query: 47 FETLQSLN--YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 E + + + + + P T+ + Sbjct: 61 AELFAGYTVVWRSSVEPARKGYAGTMYLYKESLTPKVTYPTIGAPEPMDEEGRIITLEFE 120 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 + +Y P+ + + R L+ ++P+I +GD+N+ + D Sbjct: 121 NFYLTEVYTPNSGTGLKRLAERQEWD--DRYREYLTELDRQKPVIASGDFNVAHEEIDLA 178 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYA-DSWSKNKGIR 222 +P + A FT E R+ F L GFTD+ R+ H YS+W A S N G R Sbjct: 179 HPANNHHSAGFTDEEREKFTALLAAGFTDSFRSLHPDETGAYSWWAQRAVTSKVNNSGWR 238 Query: 223 IDHIMLSPEATSLLHSA-RIDTKPRGWTKPSDHTPVIVSLDIPE 265 ID+ ++S + S+ ID+ R DH P+ + ++IP Sbjct: 239 IDYWLVSDRLADQVVSSTMIDSGERR-----DHAPIQLDINIPA 277 >gi|299782782|gb|ADJ40780.1| Exodeoxyribonuclease [Lactobacillus fermentum CECT 5716] Length = 279 Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats. Identities = 61/284 (21%), Positives = 106/284 (37%), Gaps = 29/284 (10%) Query: 4 VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTED-------KNFP 46 + +WN++SI A + + IK PD+I +QETK + Sbjct: 1 MRFISWNIDSINAALTGTSARAEETRAVLEKIKAAAPDVIAIQETKLSKSGPTKKHQGVL 60 Query: 47 FETLQSLN--YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 E + + + + + P T+ + Sbjct: 61 AELFAGYTVVWRSSVEPARKGYAGTMYLYKESLTPKVTYPTIGAPEPMDKEGRIITLEFE 120 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 + +Y P+ + + R L+ ++P+I +GD+N+ + D Sbjct: 121 NFYLTEVYTPNSGTGLKRLAERQEWD--DRYREYLTELDRQKPVIASGDFNVAHEEIDLA 178 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYA-DSWSKNKGIR 222 +P + A FT E R+ F L GFTD+ R+ H YS+W A S N G R Sbjct: 179 HPANNHHSAGFTDEEREKFTALLAAGFTDSFRSLHPDETGAYSWWAQRAVTSKVNNSGWR 238 Query: 223 IDHIMLSPEATSLLHSA-RIDTKPRGWTKPSDHTPVIVSLDIPE 265 ID+ ++S + S+ ID+ R DH P+ + ++IP Sbjct: 239 IDYWLVSDRLADQVVSSTMIDSGERR-----DHAPIQLDINIPA 277 >gi|227502780|ref|ZP_03932829.1| possible exodeoxyribonuclease III [Corynebacterium accolens ATCC 49725] gi|227076510|gb|EEI14473.1| possible exodeoxyribonuclease III [Corynebacterium accolens ATCC 49725] Length = 297 Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats. Identities = 59/306 (19%), Positives = 103/306 (33%), Gaps = 55/306 (17%) Query: 1 MSVVTVATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 MS +T+A+ NVN IRA + AW+++ DI+ +QE + +L Sbjct: 1 MS-LTIASVNVNGIRAACKQRNENNPGMNAWLEQTPADIVLMQEVRATPDQARKALAPAL 59 Query: 54 --NYHIE--TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 +H+E K GV ILS+ ++ + +R+ Sbjct: 60 EAGWHLELADAAAKGRAGVGILSRTPLADVEIGFGSFTDAGRWIAATTRD------IRVA 113 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 +LYLP G+ + + + A ++ ++ GD+NI + D N Sbjct: 114 SLYLPSGDTDSPKLDEKYRFLDEFDAVLAENA---DKDMVIGGDWNICHRAQDLKNNKAN 170 Query: 170 ENDACFTLEVR----------------------------------QSFQKLQNMGFTDAI 195 E A E R F A Sbjct: 171 EKKAGHLPEERAFLDHVFGSFPDEEPQEKKNLGEWLGVVDYAGTTPWEPATAPQWFDVAR 230 Query: 196 RATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHT 255 R + Y++W Y +++ + G RID+ + +D P + SDH+ Sbjct: 231 RLHPEADGPYTWWTYRGQAFNNDAGWRIDYQAATQPLLDRAQRTWVDKAPTVEQRWSDHS 290 Query: 256 PVIVSL 261 P++V Sbjct: 291 PLLVEY 296 >gi|325685174|gb|EGD27297.1| exodeoxyribonuclease III [Lactobacillus delbrueckii subsp. lactis DSM 20072] Length = 275 Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats. Identities = 57/282 (20%), Positives = 108/282 (38%), Gaps = 29/282 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTED------KNFPF 47 + + +WN++S+ A + + + + +PD++ LQETK Sbjct: 1 MRLISWNIDSLNAALTGTSPRAEMTRGVLKNLHDLDPDVLALQETKLPASGPSKKHQAAL 60 Query: 48 ETLQSLNYHIETCGQKS---YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 L Y + + + + ++ V P F T+ Sbjct: 61 ADLFPEYYFVWRSSMEPARKGYAGTMFLYKKGLDPVVTRPEIGAPEPMDFEGRILTLEFP 120 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 + +Y P+ D + + R + L+ ++P++ +GD+N Q D Sbjct: 121 DFYVTQVYTPNAGNGLVRLGDRQ--EWDKCYRAYLEELDKKKPVLASGDFNAAYQEIDLK 178 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYY-ADSWSKNKGIR 222 +P + A FT E R F +L GFTD R H +YS+W + + N G R Sbjct: 179 HPENNHHSAGFTDEERAGFGQLLAAGFTDTFRQIHGQVEGVYSWWAQRVRTAKANNSGWR 238 Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 ID+ ++S + + I+T R DH P+++ + + Sbjct: 239 IDYWLVSNRLADQVEKSEMIETGERA-----DHCPILLEIKL 275 >gi|323465631|gb|ADX69318.1| Exodeoxyribonuclease A [Lactobacillus helveticus H10] Length = 284 Score = 136 bits (341), Expect = 4e-30, Method: Composition-based stats. Identities = 59/282 (20%), Positives = 107/282 (37%), Gaps = 25/282 (8%) Query: 2 SVVTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTED-------KN 44 ++ + +WN++S+ A + + I NPDII +QETK + Sbjct: 8 KIMILISWNIDSLNAALTGTSARAEETRGVLDKIHALNPDIIAIQETKLRATGPTKKHQT 67 Query: 45 FPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 E +Y + + + G A E+ + + E I + Sbjct: 68 ILAEKFPEYDYVWRSSEEPARKGYAGTMYLYKKELTPAVSKPAIGAPEPMDEEGRIITLE 127 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 + + N K + ++L ++P++ +GDYN D Sbjct: 128 FDKYFVTQVYTPNSGNGLKRLADRQVWDQKYIEYLKKLNEKKPVLASGDYNCAHTEIDLK 187 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYY-ADSWSKNKGIR 222 +P + A FT E R F L + GFTD R + +YS+W + + N G R Sbjct: 188 HPENNHHSAGFTDEERADFTNLLDAGFTDTFRKVNGNVEGVYSWWAQRVRTAKANNSGWR 247 Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 ID+ ++S + + IDT R DH P+++ +++ Sbjct: 248 IDYWLVSNRIADKVVRSEMIDTGKRA-----DHCPILLEINL 284 >gi|311347452|gb|ADP90671.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] Length = 518 Score = 136 bits (341), Expect = 5e-30, Method: Composition-based stats. Identities = 59/336 (17%), Positives = 106/336 (31%), Gaps = 64/336 (19%) Query: 3 VVTVATWNVNSIRARIHNLA-------------AWIKENNPDIICLQETKTEDKNF--PF 47 ++ V +WN+N IR + +A + E + DI+CLQETK P Sbjct: 1 MLRVVSWNINGIRRPLQGVANQEPSNCAAVAVGRILDELDADIVCLQETKVTRDALTEPL 60 Query: 48 ETLQSLN-YHIETCGQKSYNGVAILSKYQPIEI---------------VTHLPGDDLDVQ 91 ++ N Y + + Y+GVA K + G+ + Sbjct: 61 AIVEGYNSYFSFSRNRSGYSGVATFCKDNATPVAAEEGLSGLFATQNGDVGCYGNMDEFT 120 Query: 92 A---------------RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 + T+ +TL + N+Y PH +P + K+ + + Sbjct: 121 QEELRALDSEGRALLTQHKIRTWEGKEKTLTLINVYCPHADPGRPERLVFKMRFYRLLQI 180 Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCY-----------NPIIWENDACFTLEVRQSFQK 185 A L +I GD N +P D + W + L + + Sbjct: 181 RAEALLAAGSHVIILGDLNTAHRPIDHWDAVNLECFEEDPGRKWMDSLLSNLGCQSASHV 240 Query: 186 LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT-SLLHSARIDTK 244 + + ++ W + N G R+D+++ ++ + + Sbjct: 241 GPFIDSYRCFQP--KQEGAFTCWSAVTGARHLNYGSRLDYVLGDRTLVIDTFQASFLLPE 298 Query: 245 PRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 G SDH PV L + KQ P Sbjct: 299 VMG----SDHCPVGAVLSVSSVPAKQCPPLCTRFLP 330 >gi|5410346|gb|AAD43041.1|AF119046_1 APE2 protein [Homo sapiens] Length = 518 Score = 136 bits (341), Expect = 5e-30, Method: Composition-based stats. Identities = 59/336 (17%), Positives = 106/336 (31%), Gaps = 64/336 (19%) Query: 3 VVTVATWNVNSIRARIHNLA-------------AWIKENNPDIICLQETKTEDKNF--PF 47 ++ V +WN+N IR + +A + E + DI+CLQETK P Sbjct: 1 MLRVVSWNINGIRRPLQGVANQEPSNCAAVAVGRILDELDADIVCLQETKVTRDALTEPL 60 Query: 48 ETLQSLN-YHIETCGQKSYNGVAILSKYQPIEI---------------VTHLPGDDLDVQ 91 ++ N Y + + Y+GVA K + G+ + Sbjct: 61 AIVEGYNSYFSFSRNRSGYSGVATFCKDNATPVAAEEGLSGLFATQNGDVGCYGNMDEFT 120 Query: 92 A---------------RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 + T+ +TL + N+Y PH +P + K+ + + Sbjct: 121 QEELRALDSEGRALLTQHKIRTWEGKEKTLTLINVYCPHADPGRPERLVFKMRFYRLLQI 180 Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCY-----------NPIIWENDACFTLEVRQSFQK 185 A L +I GD N +P D + W + L + + Sbjct: 181 RAEALLAAGSHVIILGDLNTAHRPIDHWDAVNLECFEEDPGRKWMDSLLSNLGCQSASHV 240 Query: 186 LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT-SLLHSARIDTK 244 + + ++ W + N G R+D+++ ++ + + Sbjct: 241 GPFIDSYRCFQP--KQEGAFTCWSAVTGARHLNYGSRLDYVLGDRTLVIDTFQASFLLPE 298 Query: 245 PRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 G SDH PV L + KQ P Sbjct: 299 VMG----SDHCPVGAVLSVSSVPAKQCPPLCTRFLP 330 >gi|18375507|ref|NP_055296.2| DNA-(apurinic or apyrimidinic site) lyase 2 [Homo sapiens] gi|73921676|sp|Q9UBZ4|APEX2_HUMAN RecName: Full=DNA-(apurinic or apyrimidinic site) lyase 2; AltName: Full=AP endonuclease XTH2; AltName: Full=APEX nuclease 2; AltName: Full=APEX nuclease-like 2; AltName: Full=Apurinic-apyrimidinic endonuclease 2; Short=AP endonuclease 2 gi|4996359|dbj|BAA78422.1| APEX nuclease-like 2 protein [Homo sapiens] gi|5102658|emb|CAB45242.1| AP endonuclease XTH2, putative [Homo sapiens] gi|10336529|dbj|BAB13764.1| apurinic/apyrimidinic endonuclease 2 [Homo sapiens] gi|12804203|gb|AAH02959.1| APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Homo sapiens] gi|57471611|emb|CAI43126.1| APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Homo sapiens] gi|57864642|gb|AAW56941.1| APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Homo sapiens] gi|119613615|gb|EAW93209.1| APEX nuclease (apurinic/apyrimidinic endonuclease) 2, isoform CRA_b [Homo sapiens] gi|123993987|gb|ABM84595.1| APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [synthetic construct] gi|123997761|gb|ABM86482.1| APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [synthetic construct] gi|208965822|dbj|BAG72925.1| APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [synthetic construct] gi|311347418|gb|ADP90654.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347420|gb|ADP90655.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347422|gb|ADP90656.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347424|gb|ADP90657.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347426|gb|ADP90658.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347428|gb|ADP90659.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347430|gb|ADP90660.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347432|gb|ADP90661.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347434|gb|ADP90662.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347436|gb|ADP90663.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347438|gb|ADP90664.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347440|gb|ADP90665.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347442|gb|ADP90666.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347444|gb|ADP90667.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347446|gb|ADP90668.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347448|gb|ADP90669.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347450|gb|ADP90670.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347454|gb|ADP90672.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347456|gb|ADP90673.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347458|gb|ADP90674.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347460|gb|ADP90675.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347462|gb|ADP90676.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347464|gb|ADP90677.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347466|gb|ADP90678.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347468|gb|ADP90679.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347470|gb|ADP90680.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347472|gb|ADP90681.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347474|gb|ADP90682.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347476|gb|ADP90683.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347478|gb|ADP90684.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347480|gb|ADP90685.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347482|gb|ADP90686.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347484|gb|ADP90687.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347488|gb|ADP90689.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347490|gb|ADP90690.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347492|gb|ADP90691.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347494|gb|ADP90692.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] gi|311347496|gb|ADP90693.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] Length = 518 Score = 136 bits (341), Expect = 5e-30, Method: Composition-based stats. Identities = 59/336 (17%), Positives = 106/336 (31%), Gaps = 64/336 (19%) Query: 3 VVTVATWNVNSIRARIHNLA-------------AWIKENNPDIICLQETKTEDKNF--PF 47 ++ V +WN+N IR + +A + E + DI+CLQETK P Sbjct: 1 MLRVVSWNINGIRRPLQGVANQEPSNCAAVAVGRILDELDADIVCLQETKVTRDALTEPL 60 Query: 48 ETLQSLN-YHIETCGQKSYNGVAILSKYQPIEI---------------VTHLPGDDLDVQ 91 ++ N Y + + Y+GVA K + G+ + Sbjct: 61 AIVEGYNSYFSFSRNRSGYSGVATFCKDNATPVAAEEGLSGLFATQNGDVGCYGNMDEFT 120 Query: 92 A---------------RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 + T+ +TL + N+Y PH +P + K+ + + Sbjct: 121 QEELRALDSEGRALLTQHKIRTWEGKEKTLTLINVYCPHADPGRPERLVFKMRFYRLLQI 180 Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCY-----------NPIIWENDACFTLEVRQSFQK 185 A L +I GD N +P D + W + L + + Sbjct: 181 RAEALLAAGSHVIILGDLNTAHRPIDHWDAVNLECFEEDPGRKWMDSLLSNLGCQSASHV 240 Query: 186 LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT-SLLHSARIDTK 244 + + ++ W + N G R+D+++ ++ + + Sbjct: 241 GPFIDSYRCFQP--KQEGAFTCWSAVTGARHLNYGSRLDYVLGDRTLVIDTFQASFLLPE 298 Query: 245 PRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 G SDH PV L + KQ P Sbjct: 299 VMG----SDHCPVGAVLSVSSVPAKQCPPLCTRFLP 330 >gi|297710110|ref|XP_002831748.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase 2-like [Pongo abelii] Length = 518 Score = 135 bits (340), Expect = 6e-30, Method: Composition-based stats. Identities = 59/336 (17%), Positives = 106/336 (31%), Gaps = 64/336 (19%) Query: 3 VVTVATWNVNSIRARIHNLA-------------AWIKENNPDIICLQETKTEDKNF--PF 47 ++ V +WN+N IR + +A + E + DI+CLQETK P Sbjct: 1 MLRVVSWNINGIRRPLQGVANQEPSNCAAVAVGRILDELDADIVCLQETKVTRDALTEPL 60 Query: 48 ETLQSLN-YHIETCGQKSYNGVAILSKYQPIEI---------------VTHLPGDDLDVQ 91 ++ N Y + + Y+GVA K + G+ + Sbjct: 61 AIVEGYNSYFSFSRNRSGYSGVATFCKDNATPVAAEEGLSGLFATQNGDVGCYGNMDEFT 120 Query: 92 A---------------RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 + T+ +TL + N+Y PH +P + K+ + + Sbjct: 121 QEELRALDSEGRALLTQHKIRTWEGKEKTLTLINVYCPHADPGRPERLVFKMRFYRLLQI 180 Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCY-----------NPIIWENDACFTLEVRQSFQK 185 A L +I GD N +P D + W + L + + Sbjct: 181 RAEALLAAGSHVIILGDLNTAHRPIDHWDAVNLECFEDDPGRKWMDSLLSNLGCQSASHV 240 Query: 186 LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT-SLLHSARIDTK 244 + + ++ W + N G R+D+++ ++ + + Sbjct: 241 GPFIDSYRCFQP--KQEGAFTCWSAITGARHLNYGSRLDYVLGDRTLVIDTFQASFLLPE 298 Query: 245 PRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 G SDH PV L + KQ P Sbjct: 299 VMG----SDHCPVGAVLSVSSVPAKQCPPLCTRFLP 330 >gi|168008755|ref|XP_001757072.1| predicted protein [Physcomitrella patens subsp. patens] gi|162691943|gb|EDQ78303.1| predicted protein [Physcomitrella patens subsp. patens] Length = 536 Score = 135 bits (340), Expect = 6e-30, Method: Composition-based stats. Identities = 50/290 (17%), Positives = 111/290 (38%), Gaps = 22/290 (7%) Query: 4 VTVATWNVNSIRARIHNLAA--------WIKENNPDIICLQETKTEDKNFPFETLQSLNY 55 + + +WNVN +R + ++AA + + N DI+C QE K +++ Y Sbjct: 82 MRIFSWNVNGLRTTLKDVAACHTSASNYFCQVLNADIVCFQEAKIQEEKLEKWIACVDGY 141 Query: 56 HIETCGQKSYNGVAILSKYQPI-------EIVTHLPGDDLDVQARFIEATFTINTQTLRI 108 H + G + + Y + + T + + + Sbjct: 142 HSHWAFSREKKGYSGVVTYVKEALSPLDAKADWLGENSSAEDLCNEGRLMCTDHGSFVLL 201 Query: 109 GNLYLPHGN-PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167 G+ + D K+ ++K + + + ++ GD+N+ + D ++ Sbjct: 202 NVYVPNSGDGDKGRPRLDFKMRYLKALEQTCDDLVRSGKHIVIVGDFNVAHKDIDVHSR- 260 Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227 W+ + ++LE R+ + D +++S WD +D+ ++N+G+RID+ + Sbjct: 261 -WKVEEIYSLEEREWLDGFLSRYIDLYRHFHPDEKNIFSVWDQKSDARTRNEGLRIDYAI 319 Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL-DIPEPRKKQQDSTSQ 276 + + + I + SDH V+V+L + P + S Sbjct: 320 CNEGFLTEVLETDIVK---MQKQWSDHAAVVVTLKEQPNLPPHPAPALSS 366 >gi|291536334|emb|CBL09446.1| exodeoxyribonuclease III [Roseburia intestinalis M50/1] Length = 246 Score = 135 bits (340), Expect = 6e-30, Method: Composition-based stats. Identities = 59/234 (25%), Positives = 100/234 (42%), Gaps = 12/234 (5%) Query: 32 IICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQ 91 C+QE+K ++ L + +K Y+G AI +K +P+ + + ++ D + Sbjct: 24 FFCIQESKLQEGQIDL-PLPGYFSYWNYAKKKGYSGTAIFTKKEPLNVTYGIGIEEHDKE 82 Query: 92 ARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFA 151 R I + + + ++ W F + + L+ +P+I Sbjct: 83 GRVITLEYPDFYM-----VTCYTPNSQNELARLPYRMQWEDDFRAYLKR-LDGSKPVILC 136 Query: 152 GDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDY 210 GD N+ + D NP +A F+ E R+ KL + GFTD R + +YS+W Y Sbjct: 137 GDLNVAHEEIDLKNPKTNRKNAGFSDEEREKMTKLLDAGFTDTFRYFYPDTEQIYSWWSY 196 Query: 211 YADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 + KN G RID+ + S L A+I T G SDH PV + +D+ Sbjct: 197 RFRAREKNAGWRIDYFITSKRMNDKLTGAKIHTDVFG----SDHCPVELDIDLS 246 >gi|194467701|ref|ZP_03073688.1| exodeoxyribonuclease III Xth [Lactobacillus reuteri 100-23] gi|194454737|gb|EDX43634.1| exodeoxyribonuclease III Xth [Lactobacillus reuteri 100-23] Length = 275 Score = 135 bits (340), Expect = 6e-30, Method: Composition-based stats. Identities = 64/282 (22%), Positives = 103/282 (36%), Gaps = 29/282 (10%) Query: 4 VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + +WN++SI A + + I PD+I +QETK + L L Sbjct: 1 MKFISWNIDSINAALTGTSVRAGETREVLQKIAAMKPDVIAIQETKLSKNGPTKKHLTVL 60 Query: 54 -----NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT----FTINTQ 104 NY + + A T+ Sbjct: 61 QELFPNYEVAWRSSVEPARKGYAGTMYLYLAQYEPKITYPKINAPEPMDDEGRIITLEFP 120 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 + +Y P+ + + R L+ ++P+I +GD+N+ + D Sbjct: 121 DFYVTEVYTPNSGNGLKRLDERQTWD--DCYRDYLHELDQQKPVIASGDFNVAHEEIDLA 178 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYY-ADSWSKNKGIR 222 +P + A FT E R F KL GFTD+ R H +YS+W S N G R Sbjct: 179 HPATNHHSAGFTDEERTHFSKLLAAGFTDSFRHLHPDEKGVYSWWAQRVITSKQNNSGWR 238 Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 ID+ ++S + A ID+ R DHTP+I+ +D+ Sbjct: 239 IDYWLVSDRLADKITEAGMIDSGERR-----DHTPIILEIDL 275 >gi|330890926|gb|EGH23587.1| exodeoxyribonuclease III [Pseudomonas syringae pv. mori str. 301020] Length = 259 Score = 135 bits (340), Expect = 6e-30, Method: Composition-based stats. Identities = 66/264 (25%), Positives = 110/264 (41%), Gaps = 13/264 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC-- 60 + + + NVN I+A + L +W++ N D+ICLQ+T+ Q Y + C Sbjct: 1 MRIISVNVNGIQAAVERGLLSWLQAQNADVICLQDTRASTFELDDPAFQLDGYFLYACEA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + GVA+ S+ QP +++ L + D R+++A F + I L P G Sbjct: 61 EVPAQGGVALYSRLQPKAVISGLGFETADRYGRYLQADFD----KVSIATLLFPSG-MNG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF-TLEV 179 + K + F ++ ++ I+ G + Q D N + F E Sbjct: 116 DEDLNQKFKLMDDFGKYMDKQRRKRREYIYCGSLYVAQQKLDIKNWRDSQQSPGFLAPER 175 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + + MG+ DA+R YS W + N G R D+ +L+P + SA Sbjct: 176 AWMDEIVGTMGYVDALREVSREGDQYSGWPDNEQAEMLNLGWRFDYQILTPGLRRFVRSA 235 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 R+ +PR S H P+IV D Sbjct: 236 RLPRQPR----FSQHAPLIVDYDW 255 >gi|297798308|ref|XP_002867038.1| endonuclease/exonuclease/phosphatase family protein [Arabidopsis lyrata subsp. lyrata] gi|297312874|gb|EFH43297.1| endonuclease/exonuclease/phosphatase family protein [Arabidopsis lyrata subsp. lyrata] Length = 616 Score = 135 bits (340), Expect = 6e-30, Method: Composition-based stats. Identities = 50/352 (14%), Positives = 94/352 (26%), Gaps = 74/352 (21%) Query: 4 VTVATWNVNSIRARIHNL---AAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 + + T+NVN +R R+ + + DIIC QETK + + + Y Sbjct: 1 MKIVTYNVNGLRQRVSQFESLLKLLDSFDADIICFQETKLRRQELTADLAIADGYESFFS 60 Query: 61 GQKSY-----------------------------------------NGVAILSKYQPIEI 79 ++ N ++ + Sbjct: 61 CTRTCEKGRTGYSGVATFCRVKSASSSCEIALPVAAEEGITGLVNSNSRGGKNEMSAVGE 120 Query: 80 VTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFAS 139 + ++ + + N+Y P + + + K + R Sbjct: 121 GLEEYEKEELLRIDQEGRCVITDHGHFVVFNVYGPRAVADDADRIEFKHRFYDILERRWE 180 Query: 140 QRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH 199 L + GD NI P D F R + Sbjct: 181 CLLRQGRKVFVVGDLNIAPFAVDRCEAGPDFEKNEFRKWFRSLLVERGGSFSDVFRSKHP 240 Query: 200 DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE-------------ATSLLHSARIDTKPR 246 + ++ W + N G RIDHI+++ ++ I T+ + Sbjct: 241 ERKDAFTCWSSSTGAEQFNYGSRIDHILVAGSCLHQDEDKQGHSFLACHINECEILTEYK 300 Query: 247 GWT----------------KPSDHTPVIVSL-DIPEPRKKQQDSTSQNMKPI 281 + K SDH PV S D+P+ + + P+ Sbjct: 301 RFKNENMATRWKGGLGTKLKGSDHVPVFTSFDDLPDIPEHSTPPLASRYLPM 352 >gi|109130906|ref|XP_001092143.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase 2 [Macaca mulatta] Length = 518 Score = 135 bits (339), Expect = 7e-30, Method: Composition-based stats. Identities = 58/336 (17%), Positives = 105/336 (31%), Gaps = 64/336 (19%) Query: 3 VVTVATWNVNSIRARIHNLA-------------AWIKENNPDIICLQETKTEDKNF--PF 47 ++ V +WN+N IR + +A + E + DI+CLQETK P Sbjct: 1 MLRVVSWNINGIRRPVQGVANQEPSNCAAVAVGRILDELDADIVCLQETKVTRDALTEPL 60 Query: 48 ETLQSLN-YHIETCGQKSYNGVAILSKYQPIEI---------------VTHLPGDDLDVQ 91 ++ N Y + + Y+GVA K + G+ + Sbjct: 61 AIVEGYNSYFSFSRNRSGYSGVATFCKDNATPVAAEEGLSGLFATQNGNVGCYGNMDEFT 120 Query: 92 A---------------RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 + T+ + L + N+Y PH +P + K+ + + Sbjct: 121 QEELRALDSEGRALLTQHKIRTWEGKERILTLINVYCPHADPGRPERLVFKMRFYRLLQI 180 Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCY-----------NPIIWENDACFTLEVRQSFQK 185 A L +I GD N +P D + W + L + + Sbjct: 181 RAEALLAAGSHVIILGDLNTAHRPIDHWDAVNLECFEEDPGRKWMDSLLSNLGCQSASHV 240 Query: 186 LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT-SLLHSARIDTK 244 + + ++ W + N G R+D+++ ++ + + Sbjct: 241 GPFIDSYRCFQP--KQEGAFTCWSAVTGARHLNYGSRLDYVLGDRTLVIDTFRASFLLPE 298 Query: 245 PRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 G SDH PV L + KQ P Sbjct: 299 VMG----SDHCPVGAVLSVSSVPAKQCPPLCTRFLP 330 >gi|311347486|gb|ADP90688.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens] Length = 518 Score = 135 bits (339), Expect = 7e-30, Method: Composition-based stats. Identities = 59/336 (17%), Positives = 106/336 (31%), Gaps = 64/336 (19%) Query: 3 VVTVATWNVNSIRARIHNLA-------------AWIKENNPDIICLQETKTEDKNF--PF 47 ++ V +WN+N IR + +A + E + DI+CLQETK P Sbjct: 1 MLRVVSWNINGIRRPLQGVANQEPSNCAAVAVGRILDELDADIVCLQETKVTRDALTEPL 60 Query: 48 ETLQSLN-YHIETCGQKSYNGVAILSKYQPIEI---------------VTHLPGDDLDVQ 91 ++ N Y + + Y+GVA K + G+ + Sbjct: 61 AIVEGYNSYFSFSRNRSGYSGVATFCKDNATPVAAEEGLSGLFATQNGDVGCYGNMDEFT 120 Query: 92 A---------------RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 + T+ +TL + N+Y PH +P + K+ + + Sbjct: 121 QEELRALDSEGRALLTQHKIRTWEGKEKTLTLINVYCPHADPGRPERLVFKMRFYRLLQI 180 Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCY-----------NPIIWENDACFTLEVRQSFQK 185 A L +I GD N +P D + W + L + + Sbjct: 181 RAEALLAAGSHVIILGDLNTAHRPIDHWDAVNLECFEEDPGRKWMDSLLSNLGCQSASHV 240 Query: 186 LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT-SLLHSARIDTK 244 + + ++ W + N G R+D+++ ++ + + Sbjct: 241 GPFIDSYRCFQP--KQEGAFTCWSAVTGARYLNYGSRLDYVLGDRTLVIDTFQASFLLPE 298 Query: 245 PRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 G SDH PV L + KQ P Sbjct: 299 VMG----SDHCPVGAVLSVSSVPAKQCPPLCTRFLP 330 >gi|227544091|ref|ZP_03974140.1| exodeoxyribonuclease III [Lactobacillus reuteri CF48-3A] gi|300909790|ref|ZP_07127251.1| exodeoxyribonuclease III [Lactobacillus reuteri SD2112] gi|227185924|gb|EEI65995.1| exodeoxyribonuclease III [Lactobacillus reuteri CF48-3A] gi|300893655|gb|EFK87014.1| exodeoxyribonuclease III [Lactobacillus reuteri SD2112] Length = 275 Score = 135 bits (339), Expect = 7e-30, Method: Composition-based stats. Identities = 64/282 (22%), Positives = 103/282 (36%), Gaps = 29/282 (10%) Query: 4 VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + +WN++SI A + + I PD+I +QETK + L L Sbjct: 1 MKFISWNIDSINAALTGTSVRAGETREVLKKIAAMKPDVIAIQETKLSKNGPTKKHLTVL 60 Query: 54 -----NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT----FTINTQ 104 NY + + A T+ Sbjct: 61 QELFPNYEVAWRSSVEPARKGYAGTMYLYLAQYEPKVTYPKINAPEPMDDEGRIITLEFP 120 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 + +Y P+ + + R L+ ++P+I +GD+N+ + D Sbjct: 121 DFYVTEVYTPNSGNGLKRLDERQTWD--DCYRDYLHELDQQKPVIASGDFNVAHEEIDLA 178 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYY-ADSWSKNKGIR 222 +P + A FT E R F KL GFTD+ R H +YS+W S N G R Sbjct: 179 HPATNHHSAGFTDEERTHFSKLLAAGFTDSFRHLHPDEKGVYSWWAQRVITSKQNNSGWR 238 Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 ID+ ++S + A ID+ R DHTP+I+ +D+ Sbjct: 239 IDYWLVSDRLADKITEAGMIDSGERR-----DHTPIILEIDL 275 >gi|161506683|ref|YP_001576633.1| exodeoxyribonuclease A [Lactobacillus helveticus DPC 4571] gi|260101796|ref|ZP_05752033.1| exodeoxyribonuclease [Lactobacillus helveticus DSM 20075] gi|160347672|gb|ABX26346.1| Exodeoxyribonuclease A [Lactobacillus helveticus DPC 4571] gi|260084387|gb|EEW68507.1| exodeoxyribonuclease [Lactobacillus helveticus DSM 20075] Length = 275 Score = 135 bits (339), Expect = 7e-30, Method: Composition-based stats. Identities = 59/280 (21%), Positives = 106/280 (37%), Gaps = 25/280 (8%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTED-------KNFP 46 + + +WN++S+ A + + I NPDII +QETK + Sbjct: 1 MILISWNIDSLNAALTGTSARAEETRGVLDKIHALNPDIIAIQETKLRATGPTKKHQTIL 60 Query: 47 FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 E +Y + + + G A E+ + + E I + Sbjct: 61 AEKFPEYDYVWRSSEEPARKGYAGTMYLYKKELTPAVSKPAIGAPEPMDEEGRIITLEFD 120 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 + + N K + ++L ++P++ +GDYN D +P Sbjct: 121 KYFVTQVYTPNSGNGLKRLADRQVWDQKYIEYLKKLNEKKPVLASGDYNCAHTEIDLKHP 180 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYY-ADSWSKNKGIRID 224 + A FT E R F L + GFTD R + +YS+W + + N G RID Sbjct: 181 ENNHHSAGFTDEERADFTNLLDAGFTDTFRKVNGNVEGVYSWWAQRVRTAKANNSGWRID 240 Query: 225 HIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 + ++S + + IDT R DH P+++ +++ Sbjct: 241 YWLVSNRIADKVVRSEMIDTGKRA-----DHCPILLEINL 275 >gi|328467999|gb|EGF39023.1| exodeoxyribonuclease A [Lactobacillus helveticus MTCC 5463] Length = 275 Score = 135 bits (339), Expect = 8e-30, Method: Composition-based stats. Identities = 59/280 (21%), Positives = 106/280 (37%), Gaps = 25/280 (8%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTED-------KNFP 46 + + +WN++S+ A + + I NPDII +QETK + Sbjct: 1 MILISWNIDSLNAALTGTSARAEETRGVLDKIHALNPDIIAIQETKLRATGPTKKHQTIL 60 Query: 47 FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 E +Y + + + G A E+ + + E I + Sbjct: 61 AEKFPEYDYVWRSSEEPARKGYAGTMYLYKKELKPAVSKPAIGAPEPMDEEGRIITLEFD 120 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 + + N K + ++L ++P++ +GDYN D +P Sbjct: 121 KYFVTQVYTPNSGNGLKRLADRQVWDQKYIEYLKKLNEKKPVLASGDYNCAHTEIDLKHP 180 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYY-ADSWSKNKGIRID 224 + A FT E R F L + GFTD R + +YS+W + + N G RID Sbjct: 181 ENNHHSAGFTDEERADFTNLLDAGFTDTFRKVNGNVEGVYSWWAQRVRTAKANNSGWRID 240 Query: 225 HIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 + ++S + + IDT R DH P+++ +++ Sbjct: 241 YWLVSNRIADKVVRSEMIDTGKRA-----DHCPILLEINL 275 >gi|227832356|ref|YP_002834063.1| putative exodeoxyribonuclease [Corynebacterium aurimucosum ATCC 700975] gi|227453372|gb|ACP32125.1| putative exodeoxyribonuclease [Corynebacterium aurimucosum ATCC 700975] Length = 302 Score = 135 bits (339), Expect = 9e-30, Method: Composition-based stats. Identities = 56/307 (18%), Positives = 107/307 (34%), Gaps = 50/307 (16%) Query: 1 MSVV--TVATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51 M+ + T+A+ NVN IRA + AW++ D++ +QE + + Sbjct: 1 MAGMSFTIASVNVNGIRAACKQRNENNPGMNAWLETTPADVVLMQEVRANPEQTQKALAP 60 Query: 52 SL--NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 +L +++ + + + + RFI AT +R+ Sbjct: 61 ALEAGWNLVQAESAAKGRAGVGILSKHALGDVSVGFGSFAESGRFIAATVEG----VRVA 116 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 +LYLP G+ S K D+K ++ F + + GD+NI + D N Sbjct: 117 SLYLPSGDT-DSPKQDEKYLFLDEFSEVLDEMAATYPEAVIGGDWNICHRAQDLKNNKAN 175 Query: 170 ENDACFTLEVR---------------------------------QSFQKLQNMGFTDAIR 196 E + E R +++ + + D R Sbjct: 176 EKKSGHLPEERAFMDRVFGSFPDEQPQDKKGLGNWLGVVDYETKTAWEAAADPQWFDVAR 235 Query: 197 ATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHT 255 H Y++W Y +++ + G RID+ + ++ P + SDH+ Sbjct: 236 RLHPEADGPYTWWTYRGQAFNNDAGWRIDYQAATKAMLERAQRTWVEKAPTVEERWSDHS 295 Query: 256 PVIVSLD 262 P++V Sbjct: 296 PLLVEYK 302 >gi|300811911|ref|ZP_07092372.1| exodeoxyribonuclease III [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] gi|300497108|gb|EFK32169.1| exodeoxyribonuclease III [Lactobacillus delbrueckii subsp. bulgaricus PB2003/044-T3-4] Length = 275 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 54/282 (19%), Positives = 110/282 (39%), Gaps = 29/282 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPF------ 47 + + +WN++S+ A + + + + +PD++ LQETK Sbjct: 1 MRLISWNIDSLNAALTGTSPRAEMTRGVLKNLHDLDPDVLALQETKLPASGPSKKHQAAL 60 Query: 48 -ETLQSLNYHIETCGQKSY--NGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 + ++ + + + + + ++ + P F T+ Sbjct: 61 ADLFPEYDFVWRSSMEPARKGYAGTMFLYKKGLDPLVTRPEIGAPEPMDFEGRILTLEFP 120 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 + +Y P+ D + + R + L+ ++P++ +GD+N Q D Sbjct: 121 DFYVTQVYTPNAGNGLVRLGDRQ--EWDKCYRAYLEELDKKKPVLASGDFNAAYQEIDLK 178 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYY-ADSWSKNKGIR 222 +P + A FT E R F +L GFTD R H +YS+W + + N G R Sbjct: 179 HPKNNHHSAGFTDEERAGFGQLLAAGFTDTFRQIHGQVEGVYSWWAQRVRTAKANNSGWR 238 Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 ID+ ++S + + I+T R DH P+++ + + Sbjct: 239 IDYWLVSNRLADQVEKSEMIETGERA-----DHCPILLEIKL 275 >gi|83595025|ref|YP_428777.1| exodeoxyribonuclease III xth [Rhodospirillum rubrum ATCC 11170] gi|83577939|gb|ABC24490.1| Exodeoxyribonuclease III xth [Rhodospirillum rubrum ATCC 11170] Length = 249 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 58/248 (23%), Positives = 93/248 (37%), Gaps = 6/248 (2%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN-YHIETCGQKSYNGVAILSKYQPIEI 79 +A ++ D++CLQE K + P L + H YNGV I S+ + Sbjct: 1 MARLVESRAIDVLCLQEIKARPDHVPTAALAEMGLVHQALHTMPGYNGVGIFSRLPLEDS 60 Query: 80 VTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFAS 139 V R + T +P + ++ K+++ + Sbjct: 61 T--PFDWCDRVDCRHLRTRVAGFTLHCLYIPAGGDIPDPEENPRFRHKLAFFDALTDWFD 118 Query: 140 QRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN--MGFTDAIRA 197 + L+ + P + GD+N+ P D ++ T LQ R Sbjct: 119 RTLDPDMPAMVVGDFNVAPLETDVWDHRKMRGVVSHTPVEVAKLGALQASGPWIDAMRRF 178 Query: 198 THDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTP 256 L+++W Y A W N+G R+DHI ++P L + R WT PSDH P Sbjct: 179 VPPEEKLFTWWSYRAKDWRLTNRGRRLDHIWVTPALVDRLRGLEVMDDTRDWTPPSDHVP 238 Query: 257 VIVSLDIP 264 VIV +D P Sbjct: 239 VIVHIDPP 246 >gi|321477228|gb|EFX88187.1| hypothetical protein DAPPUDRAFT_305561 [Daphnia pulex] Length = 476 Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats. Identities = 56/310 (18%), Positives = 89/310 (28%), Gaps = 38/310 (12%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY---HIET 59 + + TWN+N IR+ NL DIICLQETK T Y + + Sbjct: 1 MFNIVTWNINGIRSSQQNLKDLFDSLGADIICLQETKITRDMLDESTALVDGYSSFYSFS 60 Query: 60 CGQKSYNGVAILSKYQPIEIVT-----HLPGDDLDVQARFIEATFTINTQTLR------- 107 + Y+GVA K D + + + LR Sbjct: 61 RKRSGYSGVATYCKNSYSPFQAEEGLAGTFNVHDDKIDFYDNVHSSFTDEGLRALDAEGR 120 Query: 108 -----------------IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIF 150 + + K+ + + L +I Sbjct: 121 CVMTLHKFKKEETSISLVVINVYCPNAGENDERLPYKLEFYRALNLRCHDFLSQGYYVIV 180 Query: 151 AGDYNIIPQPHDCYNPII--WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFW 208 GD N+ + D P + L + + ++ W Sbjct: 181 LGDMNVSHRLIDHCEPEDVSSFPKSPSRLWLDGFLHEGGGKFVDSFRHLYPTKEKAFTCW 240 Query: 209 DYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268 + + N G RID+I+LS + T L I + G SDH PV SL + Sbjct: 241 NTKLSARVNNYGTRIDYILLSNQLTDALQDCIIMSDVYG----SDHCPVKSSLALDIIPS 296 Query: 269 KQQDSTSQNM 278 + + Sbjct: 297 TKLPALCTKF 306 >gi|88705453|ref|ZP_01103164.1| exodeoxyribonuclease III [Congregibacter litoralis KT71] gi|88700543|gb|EAQ97651.1| exodeoxyribonuclease III [Congregibacter litoralis KT71] Length = 253 Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats. Identities = 61/264 (23%), Positives = 100/264 (37%), Gaps = 15/264 (5%) Query: 4 VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + +++ + +R A W+ + D IC+Q+ + + + + +Y+ Sbjct: 1 MRIISFSADGLREAAKRGFYDWLSRQDADFICIQDIRCSEYDLQDDVFFPSDYNAYFFDD 60 Query: 62 -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 NGVAI + P I+T L D D+Q R+I+A + L +G L P N Sbjct: 61 VNGKDNGVAIYCRALPKAIMTGLGFADFDMQGRYIQADYG----ELSVGCLLAPVANDGA 116 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K + + + G++ I D N N + F E R Sbjct: 117 VEEQKTKNEFFSLLGAHLEKVRNKRRKFLICGNWRIAHTAADMQNSAENSNRSGFLPEER 176 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 Q L G+ DA R + +S+W G RID ++S E + A Sbjct: 177 QWMDALLENGYRDAFRQVSNDSDAFSYWP----GERGEDGWRIDLQIISEELQYSVEHAA 232 Query: 241 IDTKPRGWTKPSDHTPVIVSLDIP 264 I T S H PVI+ DI Sbjct: 233 IYT----GESFSRHAPVIIDYDID 252 >gi|212697551|ref|ZP_03305679.1| hypothetical protein ANHYDRO_02124 [Anaerococcus hydrogenalis DSM 7454] gi|212675454|gb|EEB35061.1| hypothetical protein ANHYDRO_02124 [Anaerococcus hydrogenalis DSM 7454] Length = 275 Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats. Identities = 63/280 (22%), Positives = 106/280 (37%), Gaps = 25/280 (8%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTED-------KNFP 46 + + +WN++S+ A + ++ I + + DIICLQETK K Sbjct: 1 MKIISWNIDSLNAALTSDSNRAKMSRDVLDTIIKEDADIICLQETKLPRTGPSKKHKEIL 60 Query: 47 FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 NY + + + A + E + LD + I + Sbjct: 61 ESYFPQYNYAWISSQEPARKSYAGCLTFYKKEFEPIISYPTLDAPDTMDQEARLITLEFE 120 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 + N + D + ++L+ +P+I GD+N+ + D +P Sbjct: 121 NFYLTQVYTPNAGSGLSRLDLRQVWDKKYANYLEKLDQNKPVIACGDFNVAHKEIDLKHP 180 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIRID 224 A FT E R F L N GF D R H D Y++W S N G RID Sbjct: 181 ENNHKSAGFTDEERSGFTNLLNKGFVDTFRYLHGDVEGKYTWWAQRVKTSKINNSGWRID 240 Query: 225 HIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 + ++S + + ID+ R DHTP+ +++D+ Sbjct: 241 YFIVSDRIKEKIKESDMIDSGDRQ-----DHTPIYINMDM 275 >gi|301792507|ref|XP_002931219.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase 2-like [Ailuropoda melanoleuca] gi|281349729|gb|EFB25313.1| hypothetical protein PANDA_022064 [Ailuropoda melanoleuca] Length = 516 Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats. Identities = 57/334 (17%), Positives = 103/334 (30%), Gaps = 60/334 (17%) Query: 3 VVTVATWNVNSIRARIHNLA-------------AWIKENNPDIICLQETKTEDKNF--PF 47 ++ V +WN+N IR+ + + + + + DI+CLQETK P Sbjct: 1 MLRVVSWNINGIRSPLQGMVYEEPSNCAAMAMGRILDKLDADIVCLQETKVTRDVLTEPL 60 Query: 48 ETLQSLN-YHIETCGQKSYNGVAILSKYQPIE------------IVTHLPGDDLDVQA-- 92 ++ N Y + + Y+GVA K G ++ Sbjct: 61 AIIEGYNSYFSFSRNRSGYSGVATFCKDSVTPMAAEEGLSGLLATHNGDVGCYGNMDEFT 120 Query: 93 ----------------RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 + T+ +TL + N+Y PH + + K+ + + Sbjct: 121 QEELRALDSEGRALLTQHKIRTWEGKEKTLTLINVYCPHADAGKPERLSFKMRFYRLLQI 180 Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYN----PIIWENDACFTLEVRQSFQKLQNMGFT 192 A L +I GD N +P D ++ E+ ++ S Q Sbjct: 181 RAEALLAAGSHVIILGDLNTAHRPIDHWDAVNLECFEEDPGRKWMDGLLSNLGCQAGSHV 240 Query: 193 DAI-----RATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT-SLLHSARIDTKPR 246 ++ W + + N G R+D+++ + + Sbjct: 241 RPFIDSYRCFQPKQEGAFTCWSAVSGARHLNYGSRLDYVLGDRTLVIDTFQDSFRLPEVM 300 Query: 247 GWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 G SDH PV L + KQ P Sbjct: 301 G----SDHCPVGAVLSVSSMPAKQCPPLCTRFLP 330 >gi|116628715|ref|YP_813887.1| exonuclease III [Lactobacillus gasseri ATCC 33323] gi|282852356|ref|ZP_06261698.1| exodeoxyribonuclease III [Lactobacillus gasseri 224-1] gi|311111551|ref|ZP_07712948.1| exodeoxyribonuclease III [Lactobacillus gasseri MV-22] gi|116094297|gb|ABJ59449.1| Exonuclease III [Lactobacillus gasseri ATCC 33323] gi|282556098|gb|EFB61718.1| exodeoxyribonuclease III [Lactobacillus gasseri 224-1] gi|311066705|gb|EFQ47045.1| exodeoxyribonuclease III [Lactobacillus gasseri MV-22] Length = 275 Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats. Identities = 64/280 (22%), Positives = 110/280 (39%), Gaps = 25/280 (8%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTED-------KNFP 46 + + +WN++S+ A + + IKE +PDII +QETK + Sbjct: 1 MRLISWNIDSLNAALTSDSARAKLTRGVLNTIKEKDPDIIAIQETKLRSTGPTKKHQEIL 60 Query: 47 FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 E +Y + + + G A + + + + + Sbjct: 61 AEMFPDYDYVWRSSEEPARKGYAGTMFLYKNTLAPEVTKPVIGAPEPMDHEGRILTLEFD 120 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 + N K D Q+L+ +P+I +GDYN+ P D +P Sbjct: 121 NYYVTQVYTPNSGNELKRLDDRQVWDEKYTEYLQKLDQNKPVIASGDYNVAHTPIDLKHP 180 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYY-ADSWSKNKGIRID 224 ++A FT E RQ F KL +GFTD R H +YS+W S + N G RID Sbjct: 181 ESNHHNAGFTDEERQDFDKLLKLGFTDTFRKVHGNVEGVYSWWAQRVRTSKANNSGWRID 240 Query: 225 HIMLSPEATSLLHSARI-DTKPRGWTKPSDHTPVIVSLDI 263 + ++S + + + DT R DH P+++ +++ Sbjct: 241 YYIVSNRIADQVTKSEMLDTGERK-----DHCPIMLEINL 275 >gi|238853021|ref|ZP_04643416.1| exodeoxyribonuclease III [Lactobacillus gasseri 202-4] gi|238834359|gb|EEQ26601.1| exodeoxyribonuclease III [Lactobacillus gasseri 202-4] Length = 275 Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 64/280 (22%), Positives = 110/280 (39%), Gaps = 25/280 (8%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTED-------KNFP 46 + + +WN++S+ A + + IKE +PDII +QETK + Sbjct: 1 MRLISWNIDSLNAALTSDSARAKLTRGVLNTIKEKDPDIIAIQETKLRSTGPTKKHQEIL 60 Query: 47 FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 E +Y + + + G A + + + + + Sbjct: 61 AEMFPDYDYVWRSSEEPARKGYAGTMFLYKNTLAPEVTKPVIAAPEPMDHEGRILTLEFD 120 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 + N K D Q+L+ +P+I +GDYN+ P D +P Sbjct: 121 NYYVTQVYTPNSGNELKRLDDRQVWDEKYTEYLQKLDQNKPVIASGDYNVAHTPIDLKHP 180 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYY-ADSWSKNKGIRID 224 ++A FT E RQ F KL +GFTD R H +YS+W S + N G RID Sbjct: 181 ESNHHNAGFTDEERQDFDKLLKLGFTDTFRKVHGNVEGVYSWWAQRVRTSKANNSGWRID 240 Query: 225 HIMLSPEATSLLHSARI-DTKPRGWTKPSDHTPVIVSLDI 263 + ++S + + + DT R DH P+++ +++ Sbjct: 241 YYIVSNRIADQVTKSEMLDTGERK-----DHCPIMLEINL 275 >gi|320547311|ref|ZP_08041602.1| exodeoxyribonuclease [Streptococcus equinus ATCC 9812] gi|320448009|gb|EFW88761.1| exodeoxyribonuclease [Streptococcus equinus ATCC 9812] Length = 275 Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 58/282 (20%), Positives = 101/282 (35%), Gaps = 29/282 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDK-------NFP 46 + + +WN++S+ A + + + + DII +QETK K Sbjct: 1 MKLISWNIDSLNAALTSDSARAVLSRAVIDTLVAEDADIIAIQETKLSAKGPTKKHLQIL 60 Query: 47 FETLQSL--NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 + ++ + + + P + T+ Sbjct: 61 EDYFPDYQVSWRSSVEPARKGYAGTMFLYKNHLTPTISFPEIGAPDTMDYEGRIITLEFD 120 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 + +Y P+ + +I L+ +P++ GDYN+ D Sbjct: 121 NFYVTQVYTPNAGDGLKRLTERQIWD--EKYADYLAELDQTKPVLATGDYNVAHNEIDLA 178 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIR 222 NP A FT E R F L GFTD R H D ++YS+W + S N G R Sbjct: 179 NPNSNRRSAGFTDEERAGFTNLLAKGFTDTFRYLHGDIPNVYSWWAQRSKTSKINNTGWR 238 Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 ID+ + S + + ID+ R DHTP+++ +D+ Sbjct: 239 IDYWLASNRIADKITKSEMIDSGTRQ-----DHTPIVLEIDL 275 >gi|262183784|ref|ZP_06043205.1| putative exodeoxyribonuclease [Corynebacterium aurimucosum ATCC 700975] Length = 299 Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 57/305 (18%), Positives = 106/305 (34%), Gaps = 49/305 (16%) Query: 1 MSVVTVATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 MS T+A+ NVN IRA + AW++ D++ +QE + + +L Sbjct: 1 MS-FTIASVNVNGIRAACKQRNENNPGMNAWLETTPADVVLMQEVRANPEQTQKALAPAL 59 Query: 54 --NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 +++ + + + + RFI AT +R+ +L Sbjct: 60 EAGWNLVQAESAAKGRAGVGILSKHALGDVSVGFGSFAESGRFIAATVEG----VRVASL 115 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 YLP G+ S K D+K ++ F + + GD+NI + D N E Sbjct: 116 YLPSGDT-DSPKQDEKYLFLDEFSEVLDEMAATYPEAVIGGDWNICHRAQDLKNNKANEK 174 Query: 172 DACFTLEVR---------------------------------QSFQKLQNMGFTDAIRAT 198 + E R +++ + + D R Sbjct: 175 KSGHLPEERAFMDRVFGSFPDEQPQDKKGLGNWLGVVDYETKTAWEAAADPQWFDVARRL 234 Query: 199 HDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257 H Y++W Y +++ + G RID+ + ++ P + SDH+P+ Sbjct: 235 HPEADGPYTWWTYRGQAFNNDAGWRIDYQAATKAMLERAQRTWVEKAPTVEERWSDHSPL 294 Query: 258 IVSLD 262 +V Sbjct: 295 LVEYK 299 >gi|295397847|ref|ZP_06807910.1| exodeoxyribonuclease III [Aerococcus viridans ATCC 11563] gi|294973892|gb|EFG49656.1| exodeoxyribonuclease III [Aerococcus viridans ATCC 11563] Length = 275 Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats. Identities = 59/281 (20%), Positives = 107/281 (38%), Gaps = 27/281 (9%) Query: 4 VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + +WN++S+ A + + I+E+ PD+I +QETK K + L + Sbjct: 1 MKLISWNIDSLNAALTGASPRAELSREVLKMIREHQPDVIAIQETKLSAKGPTKKHLDII 60 Query: 54 -----NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDV----QARFIEATFTINTQ 104 +Y + + + + T+ Sbjct: 61 EADVPDYKVVWVSSVEPARKGYAGTMFLYKKDYTPEVTFPQIGAPTTMDYEGRMITLEFT 120 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 + N+Y P+ + D ++ ++ L+ ++P+I GD+N+ D Sbjct: 121 DFYVTNVYTPNAGSALARLEDRQVWDVQ--YANYLADLDAKKPVIACGDFNVAHTEIDLA 178 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIR 222 +P A FT E R F L N GFTD R H D +Y++W S N G R Sbjct: 179 HPKNNHFSAGFTDEERAGFTNLLNRGFTDTFRHIHGDVEGVYTWWAQRVKTSKINNSGWR 238 Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 ID+ ++S + + + DHTP+++ +DI Sbjct: 239 IDYWLVSDRIADKVQKSEMLDSGTRQ----DHTPILLEIDI 275 >gi|311693190|gb|ADP96063.1| exodeoxyribonuclease III Xth [marine bacterium HP15] Length = 268 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 56/268 (20%), Positives = 99/268 (36%), Gaps = 12/268 (4%) Query: 4 VTVATWNVNSI-RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + V + +VN + +A W+ E + D++C+Q+ + L Y Sbjct: 1 MRVVSISVNGLAQAVEKGFFDWLAEQDADVVCVQDHRMRAYEIEDYNLIPEGYEAYFIDG 60 Query: 62 -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI- 119 + GV I +++ P I+ + D + RFI+A F + + L + + Sbjct: 61 EKNEDGGVGIYTRHFPKAIMYGFANEQADREGRFIQADFDKVSVACVLAPCALGREDELI 120 Query: 120 ---TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN-PIIWENDACF 175 T D K +++ F + L IF + D + Sbjct: 121 GEDDLTVLDHKDEFMESFGLHMQKTLRKRRQFIFCANLQTAHHVTDASPLYHKLDFSGFL 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E + MG D R + + +++W A+ KN GIR+D+ +L+P Sbjct: 181 PHERAWLDRLFDEMGCVDGFREINKQSNQFTWWPEQAEGSRKNAGIRVDYQLLTPGIRKT 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + ID R DH PVI+ DI Sbjct: 241 IEDGWIDDSTRFC----DHAPVIMDYDI 264 >gi|302690596|ref|XP_003034977.1| hypothetical protein SCHCODRAFT_43911 [Schizophyllum commune H4-8] gi|300108673|gb|EFJ00075.1| hypothetical protein SCHCODRAFT_43911 [Schizophyllum commune H4-8] Length = 261 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 58/266 (21%), Positives = 100/266 (37%), Gaps = 19/266 (7%) Query: 4 VTVATWNVNSI-RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL-NYHIETCG 61 + +A WNV + ++ +++ +PDI+ L ETK ++ + + + Sbjct: 3 MRIAAWNVCGLATSQKKGFKFYVEAEDPDILVLSETKVNNETVDPALKERFPHSYWSIAE 62 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +KSY+G AILSK++ + + LPG + T + + T Sbjct: 63 KKSYSGTAILSKHKALSVTRTLPGHPDPNYTKGRIVTLEFENTYVVGTYVPNAGTGLKTL 122 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + + + L+ ++P+I+ GD N+ P D NP N E Sbjct: 123 NEKN----LWNEHFTTYIRDLDKKKPVIWTGDLNVAPTAIDLANPKTNWNKTPGYTEAET 178 Query: 182 SFQKL----------QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 + K + F D R H Y+++ Y KN G R+D +LS Sbjct: 179 TAFKNILTPPSNAPEDSPRFIDVWRHLHPDTQHYTYFSYRFRCREKNLGWRLDMFVLSER 238 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPV 257 + I + G SDH PV Sbjct: 239 LLEKVKMCEIRDEIYG---ASDHCPV 261 >gi|301096360|ref|XP_002897277.1| exodeoxyribonuclease [Phytophthora infestans T30-4] gi|262107161|gb|EEY65213.1| exodeoxyribonuclease [Phytophthora infestans T30-4] Length = 362 Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats. Identities = 57/251 (22%), Positives = 97/251 (38%), Gaps = 20/251 (7%) Query: 5 TVATWNVNSIRARIH-----NLAAWIKENNPDIICLQETK-TEDKNFPFETL--QSLNYH 56 + WNVN +RA + +L A++ + +PDI CL ETK D+ E Q + + Sbjct: 111 KIVAWNVNGLRAVLKRDESVHLRAYVAQEDPDIFCLSETKICRDELQKLEDFLPQYEHQY 170 Query: 57 IETCGQKSYNGVAILSKYQPIEIV----------THLPGDDLDVQARFIEATFTINTQTL 106 +K Y AI +K +P+ + + + + + Sbjct: 171 WSCAIKKGYASTAIFTKTKPLSVKDEIVVGDHDSKGVAKSANGGKDQEGRFLALEFPKFW 230 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 + G + + P+I+ GD N+ Q D +NP Sbjct: 231 LVHTYVPNAGGKLERLDFRTTQWDKAMHREMKEMEKTK--PVIWCGDLNVAHQEIDIHNP 288 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226 A FT E R+SF ++ GF D R H YS++ Y + +KNKG R+D+ Sbjct: 289 KGNHKSAGFTDEERESFGEILEDGFVDTFRHLHPDTVEYSYFGYRHNMRAKNKGWRLDYF 348 Query: 227 MLSPEATSLLH 237 ++S + + Sbjct: 349 VVSEKLLPHVR 359 >gi|300253219|gb|ADJ96599.1| APEX-like DNA repair enzyme [Camelus dromedarius] Length = 283 Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats. Identities = 62/230 (26%), Positives = 105/230 (45%), Gaps = 13/230 (5%) Query: 2 SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQ----SLNYH 56 + + + +WNV+ +RA I W+KE PDI+CLQETK + P E + Y Sbjct: 60 ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPPELQELSGLPHQYW 119 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 ++ Y+GV +LS+ PI++ + ++ D + R I A + + G Sbjct: 120 SAPSDKEGYSGVGLLSRQCPIKVSYGIGEEEHDQEGRVIVAE---FDAFVLVTVYVPNAG 176 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + +Y + R + L +PL+ GD N+ + D NP + +A FT Sbjct: 177 RGLVRLEYRQRWDEAFRKF---LKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 233 Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRID 224 E + + LQ + D+ R + + Y+FW Y ++ SKN G R+D Sbjct: 234 PQERQGFGELLQAVPLADSFRHLYPNTAYAYTFWTYMMNARSKNVGWRLD 283 >gi|148227204|ref|NP_001086779.1| APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Xenopus laevis] gi|50415222|gb|AAH77433.1| Apex2-prov protein [Xenopus laevis] Length = 517 Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats. Identities = 65/330 (19%), Positives = 103/330 (31%), Gaps = 57/330 (17%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNF--PFETLQSLN-YHIETC 60 + + +WN+N IRA L + + DIICLQETK P ++ N Y + Sbjct: 1 MKIVSWNINGIRATRVGLKETLDSLDADIICLQETKVTRDLLDEPSAIVEGYNSYFSFSR 60 Query: 61 GQKSYNGVAILSKYQPIE---------IVTHLPGDDLDVQA------------------- 92 + Y+GVA K + + G Sbjct: 61 VRSGYSGVATFCKSSTTPQAAEEGLSGVFCNRTGSVGCYGNTEQFLEEELQSLDQEGRAV 120 Query: 93 --RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIF 150 + +TL + N+Y P +P + K+ + A L+ +I Sbjct: 121 LTQHRILNCEDKEETLTVINVYCPRADPEKPERKTYKLRFYHLLQTRAEAILQNGGHVII 180 Query: 151 AGDYNIIPQPHDCYNP-----------IIWENDACFTLEVRQ-------SFQKLQNMGFT 192 GD N +P D +P W N Q + F Sbjct: 181 LGDVNTSHRPLDHCDPTDLETFEENPGRQWLNQFLGDPIPSQKGDSETVMPPSAGSGLFY 240 Query: 193 DAIRATHDTHH-LYSFWDYYADSWSKNKGIRIDHIMLSPEATSL-LHSARIDTKPRGWTK 250 D+ R H T ++ W + + N G RID+I+ + E + I + G Sbjct: 241 DSFRYFHPTQKNAFTCWCSASGARQTNYGTRIDYILGNRELVESEFLDSVIMPEVEG--- 297 Query: 251 PSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 SDH PV + + P Sbjct: 298 -SDHCPVKAFMKCQPIAANKCPPLCTKYLP 326 >gi|320094390|ref|ZP_08026175.1| exodeoxyribonuclease III [Actinomyces sp. oral taxon 178 str. F0338] gi|319978676|gb|EFW10234.1| exodeoxyribonuclease III [Actinomyces sp. oral taxon 178 str. F0338] Length = 275 Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats. Identities = 42/273 (15%), Positives = 84/273 (30%), Gaps = 15/273 (5%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 +TV T N+N IRA W++E P + +QE + ++ L + Sbjct: 2 TLTVTTVNLNGIRAAHKRGFLDWLEEAAPTALLMQEVRAPEE-ISRGILPGQWDSVWVPC 60 Query: 62 QKSYNGVAILSKYQPIEIVTHLP--------GDDLDVQARFIEATFTINTQTLRIGNLYL 113 + ++ ++ + P D + + +R+ + Y Sbjct: 61 RIKGRAGVGIAVHRDRGALVGPPRTALDGAESDADSGRWLEVLVEADGAPSPVRLVSAYF 120 Query: 114 PHGNPITSTK---YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ--PHDCYNPII 168 G T + R + E + GD+N++ + Sbjct: 121 HSGEKDTPKQEAKMAHLPRIGARMAELLASAASGGEQAVVCGDFNVVRSRADIKNWTSNH 180 Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 + E+ + ++ YS+W + ++ + G R+D+ Sbjct: 181 NKRAGVLDEEIAFLNRWVEEGWHDVVRDLAGQVQGPYSWWTWRGQAFDNDAGWRLDYQFA 240 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +P S I P + SDH PV V Sbjct: 241 TPGLARAARSFTIGRAPSYDQRFSDHAPVGVVY 273 >gi|289423957|ref|ZP_06425750.1| exodeoxyribonuclease III [Peptostreptococcus anaerobius 653-L] gi|289155734|gb|EFD04406.1| exodeoxyribonuclease III [Peptostreptococcus anaerobius 653-L] Length = 275 Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats. Identities = 59/282 (20%), Positives = 106/282 (37%), Gaps = 29/282 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQ-- 51 + + +WN++S+ A + + I + +PDII LQETK K + ++ Sbjct: 1 MRLISWNIDSLNAALTSDSARALLSREVLKTIIDLDPDIIGLQETKLSVKGLTKKHIEII 60 Query: 52 -------SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 Y + + + + + P F T+ Sbjct: 61 EEMLPDYEYVYRSSVEPARKGYAGTMFLYKKGMNVKVSYPEIGAPTTMDFEGRIITLELD 120 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 + +Y P+ + ++ K + L+ ++P++ GDYN+ D Sbjct: 121 DCYVTQVYTPNAGDGLRRLEERQVWDCK--YMEYLKTLDEDKPVLACGDYNVAHNEIDLA 178 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYAD-SWSKNKGIR 222 NP FT E R F L GF D R + YS+W S N G R Sbjct: 179 NPASNHMSPGFTDEERAGFTNLLGAGFVDTFRHKNGMVEGAYSWWAQRVKTSKINNTGWR 238 Query: 223 IDHIMLSPEATSLLHSA-RIDTKPRGWTKPSDHTPVIVSLDI 263 ID+ ++S + S+ +D+ PR DHTP+++ +++ Sbjct: 239 IDYWLVSERVADRVESSIMVDSGPRQ-----DHTPILMDINL 275 >gi|74007458|ref|XP_548620.2| PREDICTED: similar to apurinic/apyrimidinic endonuclease 2 [Canis familiaris] Length = 487 Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats. Identities = 54/311 (17%), Positives = 100/311 (32%), Gaps = 42/311 (13%) Query: 3 VVTVATWNVNSIRARIHNLA-------------AWIKENNPDIICLQETK-------TED 42 ++ V +WN+N IR+ + + + + + DI+CLQETK +D Sbjct: 1 MLRVVSWNINGIRSPLQGMVYEEPSNCAAMAMGRILDKLDADIVCLQETKVTSVATFCKD 60 Query: 43 KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV---THLPGDDLDVQARFIEATF 99 P + L + ++NG L + + + T+ Sbjct: 61 SATPMAAEEGL-----SGLLATHNGDVGCYGNMDEFTQEELRALDSEGRALLTQHKIRTW 115 Query: 100 TINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159 +TL + N+Y PH + + K+ + + A L +I GD N Sbjct: 116 EGKQKTLTLINVYCPHADAGKPERLTFKMRFYRLLQIRAEALLAAGSHVIILGDLNTAHC 175 Query: 160 PHDCYN----PIIWENDACFTLEVRQSFQKLQNMGFTDAI-----RATHDTHHLYSFWDY 210 P D ++ E+ ++ S Q ++ W Sbjct: 176 PIDHWDAVNLECFEEDPGRKWMDGLLSNLGCQAGSHVRPFIDSYRCFQPKQEGAFTCWSA 235 Query: 211 YADSWSKNKGIRIDHIMLSPEAT-SLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKK 269 + + N G R+D+++ + + + G SDH PV L + K Sbjct: 236 VSGARHLNYGSRLDYVLGDRTLVIDTFQDSFLLPEVMG----SDHCPVGAVLSVSSVPAK 291 Query: 270 QQDSTSQNMKP 280 Q P Sbjct: 292 QCPPLCTRFLP 302 >gi|325479409|gb|EGC82505.1| exodeoxyribonuclease III [Anaerococcus prevotii ACS-065-V-Col13] Length = 273 Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats. Identities = 60/279 (21%), Positives = 104/279 (37%), Gaps = 27/279 (9%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTED-------KNFP 46 + +WN++S+ A + + IK + D+I LQETK K Sbjct: 1 MKFISWNIDSLNAALTSDSNRAVMSREVLETIKREDADVIALQETKLPKSGPSKKHKEKL 60 Query: 47 FETLQSLNYHIETCGQ--KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 E +Y + + + + +++ P D F T+ Sbjct: 61 AEFFPDYDYVWTCSCEGARKSYAGTMTLYKKGLDVTETFPKIDAPGTMDFEGRIVTLEFD 120 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 +Y P+ D +I + L+ +P+I +GD+N+ P D Sbjct: 121 DFYFTQVYTPNAGNGLVRLADRQIWD--EKYADYLEGLDKIKPVIASGDFNVAHTPIDLA 178 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYAD-SWSKNKGIR 222 +P FT E R+ F +L GFTD R + Y++W S N G R Sbjct: 179 HPENNHISPGFTDEEREGFTRLLARGFTDTFRHLNKDLEGAYTWWAQRVKTSKINNSGWR 238 Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 ID+ ++S + S+ I G + DHTP+++ + Sbjct: 239 IDYFLVSDRLMERVKSSTIINS--GDRQ--DHTPIMLEI 273 >gi|227486633|ref|ZP_03916949.1| exodeoxyribonuclease III [Anaerococcus lactolyticus ATCC 51172] gi|227235345|gb|EEI85360.1| exodeoxyribonuclease III [Anaerococcus lactolyticus ATCC 51172] Length = 275 Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats. Identities = 57/282 (20%), Positives = 107/282 (37%), Gaps = 29/282 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQ-- 51 + +WN++S+ A + + + + N D+I +QETK + + Sbjct: 1 MKFISWNIDSLNAALTSDSARAIMSRLVLDTVIKENADVIAIQETKLPYTGLSKKHIAKL 60 Query: 52 -------SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 Y + + + +++ P F T+ Sbjct: 61 AEYFPDYDYVYRSSEDPARKSYAGTMTLYKKGLKVEPTYPQIGAPCTMDFEGRIITLEFD 120 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 ++Y P+ + D ++ + + L+ +P+I AGD+N+ + D Sbjct: 121 NFYFTHVYTPNAGNGLTRLADRQVWD--KLYADYLKSLDQNKPVIAAGDFNVAHEEIDLA 178 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYAD-SWSKNKGIR 222 +P FT E R+ F L GFTD R H Y++W S N G R Sbjct: 179 HPENNHESPGFTDEEREGFTNLLAKGFTDTFRHIHGRVEGKYTWWAQRVKTSKINNSGWR 238 Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 ID+ ++S L+ ++ ID+ R DHTP+++ ++I Sbjct: 239 IDYFLVSERIKDLITNSDMIDSGERQ-----DHTPIVLEINI 275 >gi|332109264|gb|EGJ10187.1| exodeoxyribonuclease III Xth [Rubrivivax benzoatilyticus JA2] Length = 227 Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats. Identities = 57/230 (24%), Positives = 97/230 (42%), Gaps = 8/230 (3%) Query: 35 LQETKTEDKNFP--FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQA 92 +QE K + + FE + L+ H +K Y+GV + ++++P ++V G + D + Sbjct: 1 MQEVKAQAADVAGRFERVGGLDGHFHFAQKKGYSGVGLYTRHEPSDVVVGFDGGEFDAEG 60 Query: 93 RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG 152 R+IE F + L I + Y P G+ L+ L+ E I G Sbjct: 61 RWIELRFDKPGRKLSIISCYFPSGSSGEER--QAAKYRFLDLLQPHLMALKAEREFILVG 118 Query: 153 DYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYA 212 D NI + D N + ++ F E R +L + G D R + Y++W Sbjct: 119 DVNIAHKEIDLKNWRGNQKNSGFLPEERAWMTRLLDSGVVDVFRRLNPQPEQYTWWSNRG 178 Query: 213 DSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 +W+KN G R+D+ + +P +I R SDH P+ + D Sbjct: 179 QAWAKNVGWRLDYHLATPALAETARREQIFLAQR----FSDHAPLTIDYD 224 >gi|58336406|ref|YP_192991.1| exodeoxyribonuclease A [Lactobacillus acidophilus NCFM] gi|227902538|ref|ZP_04020343.1| exodeoxyribonuclease A [Lactobacillus acidophilus ATCC 4796] gi|58253723|gb|AAV41960.1| exodeoxyribonuclease A [Lactobacillus acidophilus NCFM] gi|227869627|gb|EEJ77048.1| exodeoxyribonuclease A [Lactobacillus acidophilus ATCC 4796] Length = 275 Score = 132 bits (333), Expect = 3e-29, Method: Composition-based stats. Identities = 62/282 (21%), Positives = 109/282 (38%), Gaps = 29/282 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTED-------KNFP 46 + + +WN++S+ A + + I NPDII +QETK + + Sbjct: 1 MILISWNIDSLNAALTGTSARAEETRQVLEKIHAKNPDIIAIQETKLKATGPTKKHQEIL 60 Query: 47 FETLQSLNYHIETCGQKSY--NGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 E NY + + + + + + + P T+ Sbjct: 61 AEKFPEYNYVWRSSEEPARKGYAGTMYLYKKDLTPIVSYPVIGAPEPMDCEGRIITLEFN 120 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 + +Y P+ D ++ K Q L+ +P++ +GDYN D Sbjct: 121 DFYVTQVYTPNSGSGLKRLSDRQVWDQK--YTKYLQELDKHKPVLASGDYNCAHTEIDLK 178 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYAD-SWSKNKGIR 222 +P + A FT E R F L N GFTD R H +YS+W + N G R Sbjct: 179 HPNNNHHSAGFTDEERSGFTNLLNAGFTDTFRKVHGNITDVYSWWAQRVKTAKINNSGWR 238 Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 ID+ ++S + + + IDT+ R DH P+++ +++ Sbjct: 239 IDYWLVSNRIANKVVRSEMIDTEKRA-----DHCPILLEINL 275 >gi|312867077|ref|ZP_07727287.1| exodeoxyribonuclease III [Streptococcus parasanguinis F0405] gi|311097206|gb|EFQ55440.1| exodeoxyribonuclease III [Streptococcus parasanguinis F0405] Length = 275 Score = 132 bits (333), Expect = 3e-29, Method: Composition-based stats. Identities = 62/283 (21%), Positives = 102/283 (36%), Gaps = 31/283 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + +WN++S+ A + + + + DII +QETK K + L+ L Sbjct: 1 MKLISWNIDSLNAALTSDSARAKLSQEVLQTLVAEDADIIAIQETKLSAKGPTKKHLEIL 60 Query: 54 -----NYHIETCGQKS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 Y + Y G L K + +VT Sbjct: 61 EELFPGYEKTWRSSQEPARKGYAGTMFLYKKELTPVVTFPEIGAPSTMDLEGRIITLEFD 120 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 + G+ + + L+ E+P++ GDYN+ + D Sbjct: 121 KFFVTQVYTPNAGDGLKRLEERQVWDVKYAEY---LAELDKEKPVLATGDYNVAHKEIDL 177 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221 NP FT E R+ F L GFTD R H D Y++W + S N G Sbjct: 178 ANPASNRRSPGFTDEEREGFTNLLAKGFTDTFRHVHGDVPERYTWWAQRSKTSKINNTGW 237 Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 RID+ + S + + ID+ R DHTP+++ +D+ Sbjct: 238 RIDYWLTSNRVADKVTKSDMIDSGARQ-----DHTPIVLEIDL 275 >gi|148544314|ref|YP_001271684.1| exodeoxyribonuclease III Xth [Lactobacillus reuteri DSM 20016] gi|184153692|ref|YP_001842033.1| exodeoxyribonuclease [Lactobacillus reuteri JCM 1112] gi|227365036|ref|ZP_03849073.1| exodeoxyribonuclease III Xth [Lactobacillus reuteri MM2-3] gi|325681652|ref|ZP_08161172.1| exodeoxyribonuclease [Lactobacillus reuteri MM4-1A] gi|148531348|gb|ABQ83347.1| exodeoxyribonuclease III Xth [Lactobacillus reuteri DSM 20016] gi|183225036|dbj|BAG25553.1| exodeoxyribonuclease [Lactobacillus reuteri JCM 1112] gi|227069924|gb|EEI08310.1| exodeoxyribonuclease III Xth [Lactobacillus reuteri MM2-3] gi|324978964|gb|EGC15911.1| exodeoxyribonuclease [Lactobacillus reuteri MM4-1A] Length = 275 Score = 132 bits (333), Expect = 3e-29, Method: Composition-based stats. Identities = 64/282 (22%), Positives = 103/282 (36%), Gaps = 29/282 (10%) Query: 4 VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + +WN++SI A + + I PD+I +QETK + L L Sbjct: 1 MKFISWNIDSINAALTGTSVRAGETREVLKKIAVMKPDVIAIQETKLSKNGPTKKHLTVL 60 Query: 54 -----NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT----FTINTQ 104 NY + + A T+ Sbjct: 61 QELFPNYEVAWRSSVEPARKGYAGTMYLYLAQYEPKVTYPKINAPEPMDDEGRIITLEFP 120 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 + +Y P+ + + R L+ ++P+I +GD+N+ + D Sbjct: 121 DFYVTEVYTPNSGNGLKRLDERQTWD--DCYRDYLHELDQQKPVIASGDFNVAHEEIDLA 178 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYY-ADSWSKNKGIR 222 +P + A FT E R F KL GFTD+ R H +YS+W S N G R Sbjct: 179 HPATNHHSAGFTDEERTHFSKLLAAGFTDSFRHLHPDEKGVYSWWAQRVITSKQNNSGWR 238 Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 ID+ ++S + A ID+ R DHTP+I+ +D+ Sbjct: 239 IDYWLVSDRLADKITEAGMIDSGERR-----DHTPIILEIDL 275 >gi|71989536|ref|NP_001021584.1| EXOnuclease family member (exo-3) [Caenorhabditis elegans] gi|3879014|emb|CAB03235.1| C. elegans protein R09B3.1a, confirmed by transcript evidence [Caenorhabditis elegans] gi|3941298|gb|AAC82328.1| exonuclease III homolog [Caenorhabditis elegans] Length = 288 Score = 132 bits (333), Expect = 4e-29, Method: Composition-based stats. Identities = 70/266 (26%), Positives = 114/266 (42%), Gaps = 21/266 (7%) Query: 5 TVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH-----I 57 WNV +RA + + E PD++ L ETK ++ +P E ++ + + Sbjct: 35 KFVCWNVAGLRACVKKSDFKEVLAEE-PDLVFLGETKCKE--WPPEMEETFKNYTKTLVV 91 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 T Y GV +LSK P+++ + + D R I A F+ Y+P+ Sbjct: 92 STEKNGGYAGVGLLSKCAPMKVHKGIGDPEFDTAGRLIIAEFS----KFYFIGAYVPNSG 147 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND-ACFT 176 + ++P+I+ GD N+ D NP N A FT Sbjct: 148 AKLVNLEKRGRWEKLLTEKMKEMD--EKKPVIYGGDLNVAHNEIDLKNPESNRNKTAGFT 205 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 + R F ++ +GFTD RA H YSFW Y A+S K+ G R+D+ ++S + + Sbjct: 206 DQERGWFSEMLELGFTDTFRAMHPDEKKYSFWSYLANSRQKDVGWRLDYYVVSNRIMNKV 265 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLD 262 + I + G SDH PV++ +D Sbjct: 266 KRSDIMSSVMG----SDHAPVVMQID 287 >gi|227505350|ref|ZP_03935399.1| possible exodeoxyribonuclease III [Corynebacterium striatum ATCC 6940] gi|227198052|gb|EEI78100.1| possible exodeoxyribonuclease III [Corynebacterium striatum ATCC 6940] Length = 307 Score = 132 bits (333), Expect = 4e-29, Method: Composition-based stats. Identities = 56/306 (18%), Positives = 99/306 (32%), Gaps = 48/306 (15%) Query: 3 VVTVATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDK--NFPFETLQSL 53 T+A+ NVN IRA + W++E D++ +QE + K Sbjct: 2 TFTIASVNVNGIRAACKQRNENNPGMNVWLEETTADVVLMQEVRANPKETQKALAPALEA 61 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 +H+ + + + + RFI AT +R+ +LYL Sbjct: 62 GWHLVQAESAAKGRAGVGILSRTPLSDVSVGFGSFSESGRFIAATVDAEGGPVRVASLYL 121 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 P G+ S K D+K ++ F + + GD+NI + D N E + Sbjct: 122 PSGDT-DSPKQDEKYLFLDEFSEVLADLAATYPQAVIGGDWNICHRAQDLKNNKSNEKKS 180 Query: 174 CFTLEVRQSFQKLQN--------------------------------------MGFTDAI 195 E R + + A Sbjct: 181 GHLPEERAFMDHVFGSFPDELPQDKKGLGDYLGVIDYATNTDWSARVPGEDAVQWYDVAR 240 Query: 196 RATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHT 255 R D Y++W Y +++ + G RID+ + ++ P + SDH+ Sbjct: 241 RLAPDADGPYTWWTYRGQAFNNDAGWRIDYQAATKAMLERAEKTWVEKAPTVEQRWSDHS 300 Query: 256 PVIVSL 261 P++V Sbjct: 301 PLLVQY 306 >gi|104773315|ref|YP_618295.1| exodeoxyribonuclease III [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116513293|ref|YP_812199.1| exonuclease III [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|103422396|emb|CAI96933.1| Exodeoxyribonuclease III [Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842] gi|116092608|gb|ABJ57761.1| Exonuclease III [Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365] gi|325124912|gb|ADY84242.1| Exodeoxyribonuclease A [Lactobacillus delbrueckii subsp. bulgaricus 2038] Length = 275 Score = 132 bits (333), Expect = 4e-29, Method: Composition-based stats. Identities = 56/282 (19%), Positives = 110/282 (39%), Gaps = 29/282 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPF------ 47 + + +WN++S+ A + + + + +PD++ LQETK Sbjct: 1 MRLISWNIDSLNAALTGTSPRAEMTRGVLKNLHDLDPDVLALQETKLPASGPSKKHQAAL 60 Query: 48 -ETLQSLNYHIETCGQKSY--NGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 + ++ + + + + + +E V P F T+ Sbjct: 61 ADLFPEYDFVWRSSMEPARKGYAGTMFLYKKGLEPVVTRPEIGAPEPMDFEGRILTLEFP 120 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 + +Y P+ D + + R + L+ ++P++ +GD+N Q D Sbjct: 121 DFYVTQVYTPNAGNGLVRLGDRQEWD--KCYRAYLEELDKKKPVLASGDFNAAYQEIDLK 178 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYY-ADSWSKNKGIR 222 +P + A FT E R F +L GFTD R H +YS+W + + N G R Sbjct: 179 HPENNHHSAGFTDEERAGFGQLLAAGFTDTFRQIHGQVEGVYSWWAQRVRTAKANNSGWR 238 Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 ID+ ++S + + I+T R DH P+++ + + Sbjct: 239 IDYWLVSNRLADQVEKSEMIETGERA-----DHCPILLEVKL 275 >gi|259503288|ref|ZP_05746190.1| exodeoxyribonuclease [Lactobacillus antri DSM 16041] gi|259168743|gb|EEW53238.1| exodeoxyribonuclease [Lactobacillus antri DSM 16041] Length = 275 Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats. Identities = 61/282 (21%), Positives = 103/282 (36%), Gaps = 29/282 (10%) Query: 4 VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + +WN++SI A + + + PD + +QETK + LQ L Sbjct: 1 MKFISWNIDSINAALTGTSTRAGETRAVLKKLAALEPDAVAIQETKLSKNGPTKKHLQVL 60 Query: 54 -----NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA----TFTINTQ 104 Y + + A T+ Sbjct: 61 ADLFPGYQVAWRSSVEPARKGYAGTMYLYREQYQPTISYPQIGAPEPMDSEGRIITLEFP 120 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 + +Y P+ + + R L+ ++P+I +GD+N+ + D Sbjct: 121 DFFLTEVYTPNSGNGLKRLAEREQWD--DCYRDYLHELDQQKPVIASGDFNVAHEEIDLA 178 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYA-DSWSKNKGIR 222 +P + A FT E R F KL + GFTD+ R H YS+W S N G R Sbjct: 179 HPANNHHSAGFTDEERTHFGKLLDAGFTDSFRFLHPDQAGAYSWWAQRVLTSKQNNSGWR 238 Query: 223 IDHIMLSPEATSLLHSA-RIDTKPRGWTKPSDHTPVIVSLDI 263 ID+ ++S + S+ ID+ R DHTP+++ +D+ Sbjct: 239 IDYWLISDRLADRVSSSTMIDSGERR-----DHTPIMLEIDL 275 >gi|300362647|ref|ZP_07058823.1| exodeoxyribonuclease III [Lactobacillus gasseri JV-V03] gi|300353638|gb|EFJ69510.1| exodeoxyribonuclease III [Lactobacillus gasseri JV-V03] Length = 275 Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats. Identities = 64/280 (22%), Positives = 111/280 (39%), Gaps = 25/280 (8%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTED-------KNFP 46 + + +WN++S+ A + + IKE +PDII +QETK + Sbjct: 1 MRLISWNIDSLNAALTSDSARAKLTRGVLNTIKEKDPDIIAIQETKLRATGPTKKHQEIL 60 Query: 47 FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 E +Y + + + G A + + + + + Sbjct: 61 AEMFPDYDYVWRSSEEPARKGYAGTMFLYKNTLTPEVTKPVIGAPEPMDHEGRILTLEFD 120 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 + N K D Q+L+ +P+I +GDYN+ P D +P Sbjct: 121 NYYVTQVYTPNSGNELKRLDDRQVWDEKYTEYLQKLDQVKPVIASGDYNVAHTPIDLKHP 180 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYY-ADSWSKNKGIRID 224 ++A FT E RQ F KL +GFTD R H +YS+W S + N G RID Sbjct: 181 ENNHHNAGFTDEERQDFDKLLKLGFTDTFRKIHGNVEGVYSWWAQRVRTSKANNSGWRID 240 Query: 225 HIMLSPEATSLLHSARI-DTKPRGWTKPSDHTPVIVSLDI 263 + ++S + + + + DT R DH P+++ +++ Sbjct: 241 YYIVSNRIANQITKSEMLDTGERK-----DHCPIMLEINL 275 >gi|238757025|ref|ZP_04618213.1| Exodeoxyribonuclease III [Yersinia aldovae ATCC 35236] gi|238704855|gb|EEP97384.1| Exodeoxyribonuclease III [Yersinia aldovae ATCC 35236] Length = 228 Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats. Identities = 64/227 (28%), Positives = 100/227 (44%), Gaps = 8/227 (3%) Query: 45 FPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 FP E + YH+ GQK + GVA+L+K +P+ + P D+ D Q R I A Sbjct: 2 FPLEDVSQHGYHVFYHGQKGHYGVALLTKQEPLAVRRGFPTDEEDAQRRIIMADIATPQG 61 Query: 105 TLRIGNLYLPHGNPITST-KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP--- 160 L + N Y P G K+ K + + Q+L + ++ GD NI P Sbjct: 62 PLTVINGYFPQGESRDHPTKFPAKERFYADLQNYLEQQLSADAQVLIMGDLNISPTDLDI 121 Query: 161 ---HDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWS 216 + + F E R ++LQN G D RA + + +S++DY + + Sbjct: 122 GIGEESRKRWLRTGKCSFLPEERAWLERLQNWGLVDTFRAANPDCNQQFSWFDYRSRGFD 181 Query: 217 KNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +N+G+RID ++ S + + ID R KPSDH PV + Sbjct: 182 ENRGLRIDLLLASQPLAARCIATGIDYDIRSMEKPSDHAPVWSEFAL 228 >gi|227893773|ref|ZP_04011578.1| exodeoxyribonuclease III [Lactobacillus ultunensis DSM 16047] gi|227864418|gb|EEJ71839.1| exodeoxyribonuclease III [Lactobacillus ultunensis DSM 16047] Length = 275 Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats. Identities = 60/280 (21%), Positives = 105/280 (37%), Gaps = 25/280 (8%) Query: 4 VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTED-------KNFP 46 + + +WN++S+ A + + I NPDII +QETK + Sbjct: 1 MILISWNIDSLNAALTGTSSRAGETREVLDKIHAANPDIIAIQETKLRAIGPTKKHQAVL 60 Query: 47 FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 E NY + + + G A E+ + A I + Sbjct: 61 AEKFPEYNYVWRSSEEPARKGYAGTMYLYKKELTPKASYPVIGAPAPMDSEGRMITLEFD 120 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 + + N + + + L+ ++P++ +GD+N D +P Sbjct: 121 KFFVTQVYTPNSGNGLRRLADRQVWDQKYVDYLEALDKQKPVLASGDFNCAHTEIDLKHP 180 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYY-ADSWSKNKGIRID 224 + A FT E R F L N GFTD R H +YS+W + + N G RID Sbjct: 181 ENNHHSAGFTDEERADFTNLLNGGFTDTFRKIHGNITDVYSWWAQRVRTAKANNSGWRID 240 Query: 225 HIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 + ++S + + IDT R DH P+++ +++ Sbjct: 241 YWLVSNRIADKVVRSEMIDTGKRA-----DHCPILLEINL 275 >gi|322389122|ref|ZP_08062685.1| exodeoxyribonuclease [Streptococcus parasanguinis ATCC 903] gi|321144164|gb|EFX39579.1| exodeoxyribonuclease [Streptococcus parasanguinis ATCC 903] Length = 282 Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats. Identities = 65/285 (22%), Positives = 102/285 (35%), Gaps = 31/285 (10%) Query: 2 SVVTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDK---NFPFE 48 + + + +WN++S+ A + + + + DII +QETK K E Sbjct: 6 NTMKLISWNIDSLNAALTSDSARAKLSQEVLQTLVAEDADIIAIQETKLSAKGPTKKHLE 65 Query: 49 TLQSLNYHIETCGQKS-------YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI 101 L+ L E + S Y G L K + IVT Sbjct: 66 ILEELFPQYENTWRSSQESARKGYAGTMFLYKKELSPIVTFPEIGAPSTMDLEGRIITLE 125 Query: 102 NTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161 G+ + L+ E+P++ GDYN+ + Sbjct: 126 FDGFFVTQVYTPNAGDGLKRLAERQVWDVKYAEY---LADLDKEKPVLATGDYNVAHKEI 182 Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNK 219 D NP FT E R+ F L GFTD R H D Y++W + S N Sbjct: 183 DLANPASNRRSPGFTDEEREGFTNLLAKGFTDTFRHVHGDVPERYTWWAQRSKTSKINNT 242 Query: 220 GIRIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 G RID+ + S + + ID+ R DHTP+++ +D+ Sbjct: 243 GWRIDYWLTSNRIADKVTKSDMIDSGARQ-----DHTPIVLEIDL 282 >gi|66910408|gb|AAH97053.1| Apex1 protein [Danio rerio] gi|197246969|gb|AAI64240.1| Apex1 protein [Danio rerio] Length = 296 Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats. Identities = 65/258 (25%), Positives = 111/258 (43%), Gaps = 22/258 (8%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNV+ +RA + N W+++ K + Y + + Sbjct: 55 MKITSWNVDGLRAWVKKNGLDWVRKE----------KALPADITGMPEYPHKYWAGSEDK 104 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 + Y+GVA+L K +P+ + + ++ D + R I A F Sbjct: 105 EGYSGVAMLCKTEPLNVTYGIGKEEHDKEGRVITAEFPDF-----FLVTAYVPNASRGLV 159 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + D + +W F + L+ +PL+ GD N+ Q D NP +A FT E R+ Sbjct: 160 RLDYRKTWDVDFRAY-LCGLDARKPLVLCGDLNVAHQEIDLKNPKGNRKNAGFTPEEREG 218 Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F +L GFTD+ R + + Y+FW Y ++ SKN G R+D+ +LS L ++I Sbjct: 219 FTQLLEAGFTDSFRELYPDQAYAYTFWTYMMNARSKNVGWRLDYFVLSSALLPGLCDSKI 278 Query: 242 DTKPRGWTKPSDHTPVIV 259 G SDH P+ + Sbjct: 279 RNTAMG----SDHCPITL 292 >gi|282882297|ref|ZP_06290928.1| exodeoxyribonuclease III [Peptoniphilus lacrimalis 315-B] gi|281297847|gb|EFA90312.1| exodeoxyribonuclease III [Peptoniphilus lacrimalis 315-B] Length = 275 Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats. Identities = 60/282 (21%), Positives = 107/282 (37%), Gaps = 29/282 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTED-------KNFP 46 + +WN++S+ A + + + I++ +PD+ +QETK K Sbjct: 1 MKFISWNIDSLNAALTSSSNRAILTRAVLSSIRDEDPDLFAVQETKLPPTGLSKKHKEIL 60 Query: 47 FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTH--LPGDDLDVQARFIEATFTINTQ 104 + Q +Y T +++ A + ++ P T+ + Sbjct: 61 EKEFQDYSYVYVTSKEEARKSYAGTMIFYKKDLECKATYPEIGAPGSMDMEGRIVTLEFK 120 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 +Y P+ D ++ K L+ +PL+ GD+N+ + D Sbjct: 121 DFYFSTVYTPNAGDGLKRLSDRQVWDKKYLEYCQE--LDKNKPLVLCGDFNVAHKEIDLA 178 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIR 222 NP A FT E R F L GF D R + D Y++W S N G R Sbjct: 179 NPNNNHFSAGFTDEERTGFTNLLEGGFVDTFRLINGDVEGKYTWWAQRIKTSKINNSGWR 238 Query: 223 IDHIMLSPEATSLLHSA-RIDTKPRGWTKPSDHTPVIVSLDI 263 ID+ ++S + + +D+ R DHTP+I+ +D+ Sbjct: 239 IDYFLVSQRIKDRVKKSHMMDSGQRQ-----DHTPIILEIDL 275 >gi|225869981|ref|YP_002745928.1| exodeoxyribonuclease [Streptococcus equi subsp. equi 4047] gi|225699385|emb|CAW92824.1| exodeoxyribonuclease [Streptococcus equi subsp. equi 4047] Length = 275 Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats. Identities = 63/283 (22%), Positives = 103/283 (36%), Gaps = 31/283 (10%) Query: 4 VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + +WN++S+ A + + + + DII +QETK K + L+SL Sbjct: 1 MKLISWNIDSLNAALTGESPRALLSRAVLDTLVAQDADIIAIQETKLSAKGPTKKHLESL 60 Query: 54 -NYHIETCGQKSYN---------GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 Y + G L K + IVT Sbjct: 61 LGYFPNHLNVWRSSVEPARKGYAGTMFLYKKELNPIVTFPDIGAPTTMDAEGRIITLEFN 120 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 G+ + + +L+ ++P++ GDYN+ + D Sbjct: 121 DFFVTQVYTPNAGDGLRRLEERQLWDQKYADY---LAQLDAQKPVLATGDYNVAHKEIDL 177 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221 NP FT E R F L N GFTD R H D ++YS+W + S N G Sbjct: 178 ANPASNHRSPGFTDEERLGFTNLLNRGFTDTFRFIHGDIPNVYSWWAQRSKTSKLNNTGW 237 Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 RID+ + S + + I + R DHTP+++ +D+ Sbjct: 238 RIDYWLTSNRLIDKVSRSEMISSGERQ-----DHTPILLEIDL 275 >gi|195977651|ref|YP_002122895.1| exodeoxyribonuclease ExoA [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195974356|gb|ACG61882.1| exodeoxyribonuclease ExoA [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 275 Score = 132 bits (332), Expect = 6e-29, Method: Composition-based stats. Identities = 63/283 (22%), Positives = 103/283 (36%), Gaps = 31/283 (10%) Query: 4 VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + +WN++S+ A + + + + DII +QETK K + L+SL Sbjct: 1 MKLISWNIDSLNAALTGESPRALLSRAVLDTLVAQDADIIAIQETKLSAKGPTKKHLESL 60 Query: 54 -NYHIETCGQKSYN---------GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 Y + G L K + IVT Sbjct: 61 LGYFPNHLNVWRSSVEPARKGYAGTMFLYKKELNPIVTFPDIGAPTTMDAEGRIITLEFD 120 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 G+ + + +L+ ++P++ GDYN+ + D Sbjct: 121 DFFVTQVYTPNAGDGLRRLEERQLWDQKYADY---LAQLDAQKPVLATGDYNVAHKEIDL 177 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221 NP FT E R F L N GFTD R H D ++YS+W + S N G Sbjct: 178 ANPASNHRSPGFTDEERLGFTNLLNRGFTDTFRFIHGDIPNVYSWWAQRSKTSKLNNTGW 237 Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 RID+ + S + + I + R DHTP+++ +D+ Sbjct: 238 RIDYWLTSNRLIDKVSRSEMISSGERQ-----DHTPILLEIDL 275 >gi|227878040|ref|ZP_03996030.1| exodeoxyribonuclease III [Lactobacillus crispatus JV-V01] gi|256843761|ref|ZP_05549248.1| exodeoxyribonuclease III [Lactobacillus crispatus 125-2-CHN] gi|256849680|ref|ZP_05555112.1| exodeoxyribonuclease A [Lactobacillus crispatus MV-1A-US] gi|262047734|ref|ZP_06020686.1| exodeoxyribonuclease III [Lactobacillus crispatus MV-3A-US] gi|293381982|ref|ZP_06627943.1| exodeoxyribonuclease III [Lactobacillus crispatus 214-1] gi|312977037|ref|ZP_07788786.1| exodeoxyribonuclease III [Lactobacillus crispatus CTV-05] gi|227862358|gb|EEJ69887.1| exodeoxyribonuclease III [Lactobacillus crispatus JV-V01] gi|256613666|gb|EEU18868.1| exodeoxyribonuclease III [Lactobacillus crispatus 125-2-CHN] gi|256713796|gb|EEU28785.1| exodeoxyribonuclease A [Lactobacillus crispatus MV-1A-US] gi|260571939|gb|EEX28507.1| exodeoxyribonuclease III [Lactobacillus crispatus MV-3A-US] gi|290921438|gb|EFD98479.1| exodeoxyribonuclease III [Lactobacillus crispatus 214-1] gi|310896365|gb|EFQ45430.1| exodeoxyribonuclease III [Lactobacillus crispatus CTV-05] Length = 275 Score = 132 bits (331), Expect = 6e-29, Method: Composition-based stats. Identities = 61/280 (21%), Positives = 109/280 (38%), Gaps = 25/280 (8%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTED-------KNFP 46 + + +WN++S+ A + + I + NPDII +QETK K Sbjct: 1 MILISWNIDSLNAALTGTSARAEETRQVLTKIHDANPDIIAIQETKLRATGPTKKHKEVL 60 Query: 47 FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 E +Y + + + G A + + + I + Sbjct: 61 AEKFPEYDYVWRSSEEPARKGYAGTMYLYKKGLTPAVSEPIIGAPEPMDHEGRIITLEFD 120 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 + + N + K + + Q+L+ ++P++ +GDYN D +P Sbjct: 121 KCFVTQVYTPNSGSGLKRLAERQVWDQKYIEYLQKLDEKKPVLASGDYNCAHTEIDLKHP 180 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYY-ADSWSKNKGIRID 224 + A FT E R F L N GFTD R H + +YS+W + + N G RID Sbjct: 181 ENNHHSAGFTDEERVDFTNLLNAGFTDTFRKVHGEITGVYSWWAQRVRTAKANNSGWRID 240 Query: 225 HIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 + ++S + + IDT R DH P+++ +++ Sbjct: 241 YWLVSNRIADKVVRSEMIDTGKRA-----DHCPILLEINL 275 >gi|126666553|ref|ZP_01737531.1| Exonuclease III [Marinobacter sp. ELB17] gi|126628941|gb|EAZ99560.1| Exonuclease III [Marinobacter sp. ELB17] Length = 268 Score = 132 bits (331), Expect = 6e-29, Method: Composition-based stats. Identities = 56/268 (20%), Positives = 96/268 (35%), Gaps = 12/268 (4%) Query: 4 VTVATWNVNSI-RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + V + +VN + +A WI + D+IC+Q+ + L Y Sbjct: 1 MRVVSISVNGLEQAVGKGFFDWIAGQDADVICVQDHRMRAYEVEDRQLVPEGYEAYFIDG 60 Query: 62 -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL----YLPHG 116 GV I +++ P I+ + D + RFI+A F + + Sbjct: 61 ENNEDGGVGIYTRHFPKAIMYGFANEQADREGRFIQADFDKVSVACVLAPCALGLEDDPI 120 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 T D K ++ F + L I + D + + F Sbjct: 121 GGDDLTVLDHKDDFMDAFGVHMQKTLRKRRQFIVCANLQSAHHVTDASPRYHKLDVSGFL 180 Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E + + MG DA R + + +++W +A W K GIR+D+ + +P Sbjct: 181 PHERAWLDRLFEEMGSIDAFRDINKQSNQFTWWPEWASGWRKQSGIRVDYQIATPGIRKT 240 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + ID R SDH PV++ DI Sbjct: 241 IQDGWIDDDTR----FSDHAPVVMDYDI 264 >gi|322375755|ref|ZP_08050267.1| exodeoxyribonuclease III [Streptococcus sp. C300] gi|321279463|gb|EFX56504.1| exodeoxyribonuclease III [Streptococcus sp. C300] Length = 275 Score = 132 bits (331), Expect = 7e-29, Method: Composition-based stats. Identities = 60/283 (21%), Positives = 100/283 (35%), Gaps = 31/283 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + +WN++S+ A + + + N DII +QETK K + L+ L Sbjct: 1 MKLISWNIDSLNAALTSDSARAKLSQEVLQTLVAENADIIAIQETKLSAKGPTKKHLEIL 60 Query: 54 -----NYHIETCGQKS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 Y + Y G L K + ++ Sbjct: 61 EELFPGYENAWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAPSTMDLEGRIITLEFD 120 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 G+ + + +L+ E+P++ GDYN+ + D Sbjct: 121 TFFVTQVYTPNAGDGLKRLEERQVWDVKYAEY---LAQLDKEKPVLATGDYNVAHKEIDL 177 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221 NP FT E R F L GFTD R H D Y++W + S N G Sbjct: 178 ANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHIHGDVPERYTWWAQRSKTSKINNTGW 237 Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 RID+ + S + + ID+ R DHTP+++ +++ Sbjct: 238 RIDYWLTSNRVADKVTKSDMIDSGARQ-----DHTPIVLEIEL 275 >gi|55296320|dbj|BAD68138.1| putative DNA-(apurinic or apyrimidinic site) lyase (ARP) [Oryza sativa Japonica Group] gi|55297697|dbj|BAD68287.1| putative DNA-(apurinic or apyrimidinic site) lyase (ARP) [Oryza sativa Japonica Group] Length = 307 Score = 132 bits (331), Expect = 7e-29, Method: Composition-based stats. Identities = 65/268 (24%), Positives = 115/268 (42%), Gaps = 19/268 (7%) Query: 4 VTVATWNVNSIRARI--HNL--AAWIKENNPDIICLQETKTEDKNFPF--ETLQSLN-YH 56 + + +WN+N + + + N D++CLQET E+K+ + + Y Sbjct: 51 MKILSWNINGLHDVVTTKGFSARDLAQRENFDVLCLQETHLEEKDVEKFKNLIADYDSYW 110 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 + + Y+G A++S+ +PI + + + D + R I F + N Y+P+ Sbjct: 111 SCSVSRLGYSGTAVISRVKPISVQYGIGIREHDHEGRVITLEFDG----FYLVNAYVPNS 166 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + +++ + LE +P+I AGD N Q D +NP A FT Sbjct: 167 GRFLRR-LNYRVNNWDPCFSNYVKILEKSKPVIVAGDLNCARQSIDIHNPPAKTKSAGFT 225 Query: 177 LEVRQSFQKLQNMG-FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 +E R+SF+ + D R H Y+FW + NKG R+D+ + S T Sbjct: 226 IEERESFETNFSSKGLVDTFRKQHPNAVGYTFWG--ENQRITNKGWRLDYFLASESITDK 283 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +H + I SDH+P+ + L + Sbjct: 284 VHDSYILPDV----SFSDHSPIGLVLKL 307 >gi|115440517|ref|NP_001044538.1| Os01g0801100 [Oryza sativa Japonica Group] gi|113534069|dbj|BAF06452.1| Os01g0801100 [Oryza sativa Japonica Group] Length = 310 Score = 132 bits (331), Expect = 7e-29, Method: Composition-based stats. Identities = 65/268 (24%), Positives = 115/268 (42%), Gaps = 19/268 (7%) Query: 4 VTVATWNVNSIRARI--HNL--AAWIKENNPDIICLQETKTEDKNFPF--ETLQSLN-YH 56 + + +WN+N + + + N D++CLQET E+K+ + + Y Sbjct: 54 MKILSWNINGLHDVVTTKGFSARDLAQRENFDVLCLQETHLEEKDVEKFKNLIADYDSYW 113 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 + + Y+G A++S+ +PI + + + D + R I F + N Y+P+ Sbjct: 114 SCSVSRLGYSGTAVISRVKPISVQYGIGIREHDHEGRVITLEFDG----FYLVNAYVPNS 169 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + +++ + LE +P+I AGD N Q D +NP A FT Sbjct: 170 GRFLRR-LNYRVNNWDPCFSNYVKILEKSKPVIVAGDLNCARQSIDIHNPPAKTKSAGFT 228 Query: 177 LEVRQSFQKLQNMG-FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 +E R+SF+ + D R H Y+FW + NKG R+D+ + S T Sbjct: 229 IEERESFETNFSSKGLVDTFRKQHPNAVGYTFWG--ENQRITNKGWRLDYFLASESITDK 286 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +H + I SDH+P+ + L + Sbjct: 287 VHDSYILPDV----SFSDHSPIGLVLKL 310 >gi|300813916|ref|ZP_07094220.1| exodeoxyribonuclease III [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300511979|gb|EFK39175.1| exodeoxyribonuclease III [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 275 Score = 132 bits (331), Expect = 7e-29, Method: Composition-based stats. Identities = 60/282 (21%), Positives = 108/282 (38%), Gaps = 29/282 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTED-------KNFP 46 + +WN++S+ A + + + I++ +PD+ +QETK K Sbjct: 1 MKFISWNIDSLNAALTSSSNRAILTRAVLSSIRDEDPDLFAVQETKLPPTGLSKKHKEIL 60 Query: 47 FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTH--LPGDDLDVQARFIEATFTINTQ 104 + Q +Y T +++ A + ++ P T+ + Sbjct: 61 EKEFQDYSYVYVTSKEEARKSYAGTMIFYKKDLECKATYPEIGAPGSMDMEGRILTLEFK 120 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 +Y P+ D ++ K L+ +PL+ GD+N+ + D Sbjct: 121 DFYFSTVYTPNAGDGLKRLSDRQVWDKKYLEYCQE--LDKNKPLVLCGDFNVAHKEIDLA 178 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIR 222 NP A FT E R F L + GF D R + D Y++W S N G R Sbjct: 179 NPNNNHFSAGFTDEERMGFTNLLDGGFVDTFRLINGDVEGKYTWWAQRIKTSKINNSGWR 238 Query: 223 IDHIMLSPEATSLLHSA-RIDTKPRGWTKPSDHTPVIVSLDI 263 ID+ ++S + + +D+ R DHTP+I+ +D+ Sbjct: 239 IDYFLVSQRIKDKVKKSHMMDSGQRQ-----DHTPIILEIDL 275 >gi|41055919|ref|NP_956440.1| DNA-(apurinic or apyrimidinic site) lyase 2 [Danio rerio] gi|28278715|gb|AAH44527.1| Zgc:55889 [Danio rerio] gi|182890762|gb|AAI65311.1| Zgc:55889 protein [Danio rerio] Length = 558 Score = 131 bits (330), Expect = 8e-29, Method: Composition-based stats. Identities = 56/333 (16%), Positives = 96/333 (28%), Gaps = 59/333 (17%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + TWN+N IR + + + + DIIC+QETK +T Y+ + Sbjct: 1 MKIVTWNINGIRTFKNGIKKILDSFDADIICVQETKVTRDLLDEKTAIVDGYNSYFSFSR 60 Query: 64 SYNG---------------------VAILSKYQPIEIVTHLP-----------GDDLDVQ 91 +G +LS + ++ Sbjct: 61 GRSGYSGVATYCKDAATPFLAEEGLTGLLSNQGAVIGCYGDQVELTSEELLALDNEGRAV 120 Query: 92 ARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFA 151 Q L + N+Y P +P + + K+ + + A L +I Sbjct: 121 ITQHHFIGQDGLQKLTVINVYCPRADPDKPERKEFKLQFYRLLQCRAEAILSSGSHVIIL 180 Query: 152 GDYNIIPQPHDCYNPI--IWENDACFTLEVRQSFQKLQN--------------------- 188 GD N +P D +P D + Q + Sbjct: 181 GDVNTSHRPIDHCDPDDVDNFEDNPGRKWLDQFLFETAENSENGNAADEPAEDFQESASG 240 Query: 189 MGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRG 247 F D+ R H + ++ W + N G RID+I + + + I Sbjct: 241 GKFVDSFRYFHPKRSNAFTCWSTLTGARQTNYGTRIDYIFSNHSL---VKTFFIGVDIMP 297 Query: 248 WTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 + SDH PV L + P Sbjct: 298 EVEGSDHCPVWAQLSCTLQSSPRCPPVCTRHMP 330 >gi|71910153|ref|YP_281703.1| exodeoxyribonuclease III [Streptococcus pyogenes MGAS5005] gi|71852935|gb|AAZ50958.1| exodeoxyribonuclease III [Streptococcus pyogenes MGAS5005] Length = 303 Score = 131 bits (330), Expect = 8e-29, Method: Composition-based stats. Identities = 59/283 (20%), Positives = 101/283 (35%), Gaps = 31/283 (10%) Query: 4 VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + +WN++S+ A + + + + DII +QETK K + +++L Sbjct: 29 MKLISWNIDSLNAALTGESPRALLSRAVLDTLVAQDADIIAIQETKLSAKGPTKKHIETL 88 Query: 54 -NYHIETCGQKSYN---------GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 +Y + G L K ++T Sbjct: 89 LSYFPNYLHVWRSSVEPARKGYAGTMFLYKNTLNPVITFPEIGAPTTMDAEGRIITLEFE 148 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 G+ + L+ ++P++ GDYN+ + D Sbjct: 149 DFFVTQVYTPNAGDGLRRLDDRQIWDHKYADY---LTELDAQKPVLATGDYNVAHKEIDL 205 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221 NP FT E RQ F L GFTD R H D H+Y++W + S N G Sbjct: 206 ANPNSNRRSPGFTDEERQGFTNLLARGFTDTFRHVHGDIPHVYTWWAQRSKTSKINNTGW 265 Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 RID+ + S + + I + R DHTP+++ +D+ Sbjct: 266 RIDYWLASNRLVDKVKRSEMISSGERQ-----DHTPILLDIDL 303 >gi|169833563|ref|YP_001695212.1| exodeoxyribonuclease III [Streptococcus pneumoniae Hungary19A-6] gi|168996065|gb|ACA36677.1| exodeoxyribonuclease III [Streptococcus pneumoniae Hungary19A-6] Length = 275 Score = 131 bits (330), Expect = 8e-29, Method: Composition-based stats. Identities = 61/283 (21%), Positives = 98/283 (34%), Gaps = 31/283 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + +WN++S+ A + + + N DII +QETK K + L+ L Sbjct: 1 MKLISWNIDSLNAALTSDSARAKLSQEVLQTLVAENADIIAIQETKLSAKGPTKKHLEIL 60 Query: 54 -----NYHIETCGQKS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 Y + Y G L K + ++ Sbjct: 61 EELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAPSTMDLEGRIITLEFD 120 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 G+ + + L+ E+P++ GDYN+ D Sbjct: 121 AFFVTQVYTPNAGDGLKRLEERQVWDVKYAEY---LAELDKEKPVLATGDYNVAHNEIDL 177 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221 NP FT E R F L GFTD R H D Y++W + S N G Sbjct: 178 ANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHVHGDVPERYTWWAQRSKTSKINNTGW 237 Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 RID+ + S + + ID+ R DHTP+++ +D+ Sbjct: 238 RIDYWLTSNRIADKVTKSDMIDSGARQ-----DHTPIVLEIDL 275 >gi|322373458|ref|ZP_08047994.1| exodeoxyribonuclease III [Streptococcus sp. C150] gi|321278500|gb|EFX55569.1| exodeoxyribonuclease III [Streptococcus sp. C150] Length = 275 Score = 131 bits (330), Expect = 9e-29, Method: Composition-based stats. Identities = 57/282 (20%), Positives = 101/282 (35%), Gaps = 29/282 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDK-------NFP 46 + + +WN++S+ A + + + N DII +QETK K Sbjct: 1 MKLISWNIDSLNAALTSDSARAQLSRKVIDTLVAENADIIAIQETKLSAKGPTKKHLQIL 60 Query: 47 FETLQSLN--YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 + + + + + + + V P T+ Sbjct: 61 EDYFPDYDNTWRSSVEPARKGYAGTMFLYKKELTPVITYPEIGAPSTMDCEGRIITLEFD 120 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 + +Y P+ + +I L+ ++P++ GDYN+ + D Sbjct: 121 NFFVTQVYTPNAGDGLKRLLERQIWD--EKYADYLAELDAQKPVLATGDYNVAHKEIDLA 178 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIR 222 NP FT E R F L GFTD R + D Y++W + S N G R Sbjct: 179 NPSSNRRSPGFTDEERTGFTNLLTKGFTDTYRHLNGDVTGAYTWWAQRSKTSKINNTGWR 238 Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 ID+ + S + + ID+ R DHTP+++ +D+ Sbjct: 239 IDYWLTSNRIADKVTKSDMIDSGDRQ-----DHTPIVLEIDL 275 >gi|289829520|ref|ZP_06547122.1| exonuclease III [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] Length = 228 Score = 131 bits (330), Expect = 9e-29, Method: Composition-based stats. Identities = 60/227 (26%), Positives = 94/227 (41%), Gaps = 8/227 (3%) Query: 45 FPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 FP E + L Y++ GQK + GVA+L+K PI + P D + Q R I A Sbjct: 2 FPLEEVAKLGYNVFYHGQKGHYGVALLTKATPISVRRGFPDDGEEAQRRIIMAEIPSPLG 61 Query: 105 TLRIGNLYLPHGNPITST-KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP--- 160 + + N Y P G K+ K + + + L+ + P++ GD NI P Sbjct: 62 NITVINGYFPQGESRDHPLKFPAKAQFYQNLQNYLETELKCDNPVLIMGDMNISPTDLDI 121 Query: 161 ---HDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWS 216 + + F E R+ +L G D R + +S++DY + + Sbjct: 122 GIGEENRKRWLRTGKCSFLPEEREWMSRLLKWGLVDTFRQANPQTMDKFSWFDYRSKGFV 181 Query: 217 KNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 N+G+RID ++ S ID R KPSDH PV + + Sbjct: 182 DNRGLRIDLLLASAPLAERCAETGIDYDIRSMEKPSDHAPVWATFRV 228 >gi|312870577|ref|ZP_07730692.1| exodeoxyribonuclease III [Lactobacillus oris PB013-T2-3] gi|311093892|gb|EFQ52221.1| exodeoxyribonuclease III [Lactobacillus oris PB013-T2-3] Length = 275 Score = 131 bits (330), Expect = 9e-29, Method: Composition-based stats. Identities = 63/282 (22%), Positives = 103/282 (36%), Gaps = 29/282 (10%) Query: 4 VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + +WN++SI A + + I PD + +QETK + LQ L Sbjct: 1 MKFISWNIDSINAALTGTSTRAGETRAVLKKISALEPDAVAIQETKLSKNGPTKKHLQVL 60 Query: 54 -----NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA----TFTINTQ 104 Y I + A T+ Sbjct: 61 ADLFPGYQIAWRSSVEPARKGYAGTMYLYRDQYQPTVTYPQIGAPEPMDSEGRIITLEFH 120 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 + +Y P+ D + R +L+ ++P+I +GD+N+ + D Sbjct: 121 DFFLTEVYTPNSGNGLKRLADREQWD--DCYRDYLHQLDEQKPVIASGDFNVAHEEIDLA 178 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYA-DSWSKNKGIR 222 +P + A FT E R F +L GFTD+ R H YS+W S N G R Sbjct: 179 HPANNHHSAGFTDEERSHFGQLLAAGFTDSFRFLHPEEAGAYSWWAQRVLTSKQNNSGWR 238 Query: 223 IDHIMLSPEATSLL-HSARIDTKPRGWTKPSDHTPVIVSLDI 263 ID+ ++S + S+ ID+ R DHTP+++ +D+ Sbjct: 239 IDYWLVSNRLADRVSSSSMIDSGERR-----DHTPIMLEIDL 275 >gi|148984296|ref|ZP_01817591.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP3-BS71] gi|225859607|ref|YP_002741117.1| exodeoxyribonuclease III [Streptococcus pneumoniae 70585] gi|225861640|ref|YP_002743149.1| exodeoxyribonuclease III [Streptococcus pneumoniae Taiwan19F-14] gi|298230311|ref|ZP_06963992.1| exodeoxyribonuclease III [Streptococcus pneumoniae str. Canada MDR_19F] gi|298254703|ref|ZP_06978289.1| exodeoxyribonuclease III [Streptococcus pneumoniae str. Canada MDR_19A] gi|298503568|ref|YP_003725508.1| exodeoxyribonuclease III [Streptococcus pneumoniae TCH8431/19A] gi|147923585|gb|EDK74698.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP3-BS71] gi|225720715|gb|ACO16569.1| exodeoxyribonuclease III [Streptococcus pneumoniae 70585] gi|225726783|gb|ACO22634.1| exodeoxyribonuclease III [Streptococcus pneumoniae Taiwan19F-14] gi|298239163|gb|ADI70294.1| exodeoxyribonuclease III [Streptococcus pneumoniae TCH8431/19A] gi|301800627|emb|CBW33270.1| exodeoxyribonuclease [Streptococcus pneumoniae OXC141] gi|327390006|gb|EGE88351.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA04375] gi|332074195|gb|EGI84673.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA41301] Length = 275 Score = 131 bits (330), Expect = 9e-29, Method: Composition-based stats. Identities = 64/283 (22%), Positives = 98/283 (34%), Gaps = 31/283 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDK---NFPFETL 50 + + +WN++S+ A + + + N DII +QETK K E L Sbjct: 1 MKLISWNIDSLNAALTSDSARAKLSQEVLQTLVAENADIIAIQETKLSAKGPTKKHVEIL 60 Query: 51 QSL--NYHIETCGQKS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 + L Y + Y G L K + VT Sbjct: 61 EELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTVTFPEIGAPSTMDLEGRIITLEFD 120 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 G+ + + L+ E+P++ GDYN+ D Sbjct: 121 AFFVTQVYTPNAGDGLKRLEERQVWDVKYAEY---LAELDKEKPVLATGDYNVAHNEIDL 177 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221 NP FT E R F L GFTD R H D Y++W + S N G Sbjct: 178 ANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHVHGDVPERYTWWAQRSKTSKINNTGW 237 Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 RID+ + S + + ID+ R DHTP+++ +D+ Sbjct: 238 RIDYWLTSNRIADKVTKSDMIDSGARQ-----DHTPIVLEIDL 275 >gi|172040107|ref|YP_001799821.1| putative exodeoxyribonuclease [Corynebacterium urealyticum DSM 7109] gi|171851411|emb|CAQ04387.1| putative exodeoxyribonuclease [Corynebacterium urealyticum DSM 7109] Length = 344 Score = 131 bits (330), Expect = 9e-29, Method: Composition-based stats. Identities = 59/340 (17%), Positives = 96/340 (28%), Gaps = 83/340 (24%) Query: 5 TVATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKNFPFETLQSL--NY 55 TVAT NVN IRA + W+ + D++ +QE + ++ +L + Sbjct: 4 TVATVNVNGIRAAAKVRHENNQGILPWLAAHPADVVLMQEVRADEAQTAKAIAPALEDGW 63 Query: 56 HIE--TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL-- 111 H+ K GVAILS+ ++ + EA + I Sbjct: 64 HLAQAPAAAKGRAGVAILSRLPLQDVQIGFGHEANPEYPGAEEAAREFDGSGRYIEATVD 123 Query: 112 ------------------YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGD 153 G K+ ++ + A+ + ++ GD Sbjct: 124 AEVGGSTQPITVASLYLPSGASGTEKQDEKFRFLDAFAPFMHQRAAAAEAGGQQMLIGGD 183 Query: 154 YNIIPQPHDCYNPIIWENDACFTLEVRQSFQK---------------------------- 185 +NI + D N N + F R Sbjct: 184 WNICHRRADLKNWKPNRNKSGFLPAERAFLDHVLGTYPDGATQVGDAEDSGRAGNPAGAA 243 Query: 186 ------------------------LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI 221 Q D YS+W Y ++ N G Sbjct: 244 EDFFGAVDYQPGELAQARIAAGAATQPGWHDAVRHLHPDEDGPYSWWSYRGKAFDTNAGW 303 Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 RID ++ AR+D P + SDH+PVI+ Sbjct: 304 RIDLHAVTGGLLEHTTVARVDKAPTYDQRWSDHSPVILEF 343 >gi|288560371|ref|YP_003423857.1| exodeoxyribonuclease III Xth1 [Methanobrevibacter ruminantium M1] gi|288543081|gb|ADC46965.1| exodeoxyribonuclease III Xth1 [Methanobrevibacter ruminantium M1] Length = 246 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 62/265 (23%), Positives = 103/265 (38%), Gaps = 21/265 (7%) Query: 1 MSVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 MS + + +WNVN IR RI N + +++ PDII QETK + + L Y Sbjct: 1 MSNLKIISWNVNGIRTRIKNKDINPVLEKE-PDIILFQETKASYEQMDKKFLNKNPYDYY 59 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 +S + S IV + ++ + + ++Y P G Sbjct: 60 FLKGESARTGGLAS---FTNIVPKIIKRFFIKSQDAFHRACVLDFEDFTLIHIYAPAGTG 116 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + + ++ LI AGD+NI D N FT E Sbjct: 117 KKA---NFNQKLDYFNSLLKYVEKNKDKNLIIAGDFNIAHNDIDISNKDT---KVSFTDE 170 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R KL++ GF DA+R ++ +S+W + +N G R+D+ +S + S Sbjct: 171 ERSVLDKLESFGFVDALRLFNE-EESFSYW----KNKEENDGARLDYFFVSESLKDKVKS 225 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263 + I G S H P+ + ++I Sbjct: 226 SSILVDVEG----SKHLPIELEIEI 246 >gi|229823722|ref|ZP_04449791.1| hypothetical protein GCWU000282_01024 [Catonella morbi ATCC 51271] gi|229786761|gb|EEP22875.1| hypothetical protein GCWU000282_01024 [Catonella morbi ATCC 51271] Length = 275 Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats. Identities = 56/280 (20%), Positives = 105/280 (37%), Gaps = 25/280 (8%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTED-------KNFP 46 + + +WN++S+ A + + + + DII +QETK + Sbjct: 1 MKLISWNIDSLNAALTSDSARAQLSKAVLDQLAQAGADIIAIQETKLSPTGPTKKHEEIL 60 Query: 47 FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 E + + + + G A + + ++ + I + Sbjct: 61 AEYFPGYAHTWRSSQEPARKGYAGTLFLYREHLQPKVTFPEIGAPSTMDLEGRIITLEFD 120 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 + N K + L+ ++P++ GD+N+ Q D NP Sbjct: 121 DCYVTQVYTPNAGDGLKRLAERQVWDAKYADYLVSLDAKKPVLATGDFNVAHQEIDLANP 180 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIRID 224 A FT E R F L + GFTD+ R H D H Y++W + S N G RID Sbjct: 181 GANRQSAGFTDEERAGFTHLLSRGFTDSFRHLHGDVPHQYTWWAQRSRTSKINNTGWRID 240 Query: 225 HIMLSPEATSLLHSARI-DTKPRGWTKPSDHTPVIVSLDI 263 + ++S + + + D+ R DHTP+++ +++ Sbjct: 241 YWLVSDRIADKVTKSEMLDSGARQ-----DHTPILLEINL 275 >gi|196233332|ref|ZP_03132177.1| exodeoxyribonuclease III Xth [Chthoniobacter flavus Ellin428] gi|196222637|gb|EDY17162.1| exodeoxyribonuclease III Xth [Chthoniobacter flavus Ellin428] Length = 216 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 58/221 (26%), Positives = 93/221 (42%), Gaps = 8/221 (3%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPF-ETLQSLNYHIETCG 61 + + +WNVN IRA + +I+ NPDI+ LQETK ++ + L Sbjct: 1 MKLISWNVNGIRAVLKKGFTDFIESENPDILALQETKATPEDVVVPQALAEYTSFWNIAE 60 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G AI +K +PI + + + D + R I A + + +T Sbjct: 61 KKGYSGTAIFTKTKPIAVTLGIGVAEHDREGRVITAEYA---DFFLVNVYVPNSKRELTR 117 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 Y + R ++LEL++P+I+ GD N+ D P + FT E R Sbjct: 118 LAYRQQW---DRDFLAYLKKLELKKPVIWCGDLNVAHTEIDLARPKDNVKNHGFTPEERA 174 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR 222 F GF DA R Y++W + ++N G R Sbjct: 175 GFDAFVGAGFVDAFREFEKAGGHYTWWSQMGTARARNIGWR 215 >gi|296876863|ref|ZP_06900911.1| exodeoxyribonuclease III [Streptococcus parasanguinis ATCC 15912] gi|296432365|gb|EFH18164.1| exodeoxyribonuclease III [Streptococcus parasanguinis ATCC 15912] Length = 282 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 61/285 (21%), Positives = 102/285 (35%), Gaps = 31/285 (10%) Query: 2 SVVTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51 + + + +WN++S+ A + + + + DII +QETK K + L+ Sbjct: 6 NTMKLISWNIDSLNAALTSDSARAKLSQEVLQTLVAEDADIIAIQETKLSAKGPTKKHLE 65 Query: 52 SL-----NYHIETCGQKS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI 101 L Y + Y G L K + +VT Sbjct: 66 ILEELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPVVTFPEIGAPSTMDLEGRIITLE 125 Query: 102 NTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161 G+ + + L+ ++P++ GDYN+ + Sbjct: 126 FDHFFVTQVYTPNAGDGLKRLEERQVWDVKYAKY---LAELDKQKPVLATGDYNVAHKEI 182 Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNK 219 D NP FT E R+ F L GFTD R H D Y++W + S N Sbjct: 183 DLANPASNRRSPGFTDEEREGFTNLLAKGFTDTFRHLHGDVPERYTWWAQRSKTSKINNT 242 Query: 220 GIRIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 G RID+ + S T + + ID+ R DHTP+++ + + Sbjct: 243 GWRIDYWLTSNRVTDKITKSDMIDSGARQ-----DHTPIVLEIKL 282 >gi|227889124|ref|ZP_04006929.1| exodeoxyribonuclease III [Lactobacillus johnsonii ATCC 33200] gi|227850353|gb|EEJ60439.1| exodeoxyribonuclease III [Lactobacillus johnsonii ATCC 33200] Length = 275 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 65/282 (23%), Positives = 113/282 (40%), Gaps = 29/282 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTED-------KNFP 46 + + +WN++S+ A + ++ IKE + DII +QETK + Sbjct: 1 MRLISWNIDSLNAALTSDSPRAQLTRSVLNTIKEKDADIIAIQETKLRSTGPTKKHQEVL 60 Query: 47 FETLQSLNYHIETCGQKSY--NGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 E + +Y + + + + + P + T+ Sbjct: 61 AEIFPNYDYVWRSSEEPARKGYAGTMFLYKNTLTPEVTKPAIGAPDTMDYEGRILTLEFD 120 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 + +Y P+ D +I Q+L+ +P+I +GDYN+ P D Sbjct: 121 NYYVTQVYTPNSGNELKRLKDRQIWD--EKYTEYLQKLDKSKPVIASGDYNVAHTPIDLK 178 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYY-ADSWSKNKGIR 222 +P ++A FT E RQ F KL +GFTD R H +YS+W S N G R Sbjct: 179 HPENNHHNAGFTDEERQGFDKLLKLGFTDTFRKVHGNVEGVYSWWAQRVRTSKDNNSGWR 238 Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 ID+ ++S + + IDT R DH P+++ +++ Sbjct: 239 IDYYIVSDRIADQVTKSEMIDTGDRK-----DHCPIMLEINL 275 >gi|225869051|ref|YP_002744999.1| exodeoxyribonuclease [Streptococcus equi subsp. zooepidemicus] gi|225702327|emb|CAX00133.1| exodeoxyribonuclease [Streptococcus equi subsp. zooepidemicus] Length = 275 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 63/283 (22%), Positives = 103/283 (36%), Gaps = 31/283 (10%) Query: 4 VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + +WN++S+ A + + + + DII +QETK K + L+SL Sbjct: 1 MKLISWNIDSLNAALTGESPRALLSRAVLDSLVAQDADIIAIQETKLSAKGPTKKHLESL 60 Query: 54 -NYHIETCGQKSYN---------GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 Y + G L K + IVT Sbjct: 61 LGYFPNHLNVWRSSVEPARKGYAGTMFLYKKELNPIVTFPDIGAPTTMDAEGRIITLEFD 120 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 G+ + + +L+ ++P++ GDYN+ + D Sbjct: 121 DFFVTQVYTPNAGDGLRRLEERQLWDQKYADY---LAQLDAQKPVLATGDYNVAHKEIDL 177 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221 NP FT E R F L N GFTD R H D ++YS+W + S N G Sbjct: 178 ANPASNHRSPGFTDEERLGFTNLLNRGFTDTFRFIHGDIPNVYSWWAQRSKTSKLNNTGW 237 Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 RID+ + S + + I + R DHTP+++ +D+ Sbjct: 238 RIDYWLTSNRLIDKVSRSEMISSGERQ-----DHTPILLEIDL 275 >gi|228476989|ref|ZP_04061627.1| exodeoxyribonuclease III [Streptococcus salivarius SK126] gi|228251008|gb|EEK10179.1| exodeoxyribonuclease III [Streptococcus salivarius SK126] Length = 275 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 57/282 (20%), Positives = 101/282 (35%), Gaps = 29/282 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDK-------NFP 46 + + +WN++S+ A + + + N DII +QETK K Sbjct: 1 MKLISWNIDSLNAALTSDSARAQLSRAVIDTLVAENADIIAIQETKLSAKGPTKKHLQIL 60 Query: 47 FETLQSLN--YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 + + + + + + + V P T+ Sbjct: 61 EDYFPDYDNTWRSSVEPARKGYAGTMFLYKKELNPVITYPEIGAPSTMDCEGRIITLEFD 120 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 + +Y P+ + +I L+ ++P++ GDYN+ + D Sbjct: 121 NFFVTQVYTPNAGDGLKRLLERQIWD--EKYADYLAELDAQKPVLATGDYNVAHKEIDLA 178 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIR 222 NP FT E R F L GFTD R + D Y++W + S N G R Sbjct: 179 NPSSNRRSPGFTDEERAGFTNLLAKGFTDTYRHLNGDVTGAYTWWAQRSKTSKINNTGWR 238 Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 ID+ + S + + ID+ R DHTP+++ +D+ Sbjct: 239 IDYWLTSNRIADKVTKSDMIDSGDRQ-----DHTPIVLEIDL 275 >gi|42518122|ref|NP_964052.1| exodeoxyribonuclease [Lactobacillus johnsonii NCC 533] gi|41582406|gb|AAS08018.1| exodeoxyribonuclease [Lactobacillus johnsonii NCC 533] gi|329666434|gb|AEB92382.1| exodeoxyribonuclease III [Lactobacillus johnsonii DPC 6026] Length = 275 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 65/282 (23%), Positives = 113/282 (40%), Gaps = 29/282 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTED-------KNFP 46 + + +WN++S+ A + ++ IKE + DII +QETK + Sbjct: 1 MRLISWNIDSLNAALTSDSPRAQLTRSVLNTIKEKDADIIAIQETKLRSTGPTKKHQEVL 60 Query: 47 FETLQSLNYHIETCGQKSY--NGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 E + +Y + + + + + P + T+ Sbjct: 61 AEMFPNYDYVWRSSEEPARKGYAGTMFLYKNTLTPEVTKPTIGAPDTMDYEGRILTLEFD 120 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 + +Y P+ D +I Q+L+ +P+I +GDYN+ P D Sbjct: 121 NYYVTQVYTPNSGNELKRLEDRQIWD--EKYTEYLQKLDKSKPVIASGDYNVAHTPIDLK 178 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYY-ADSWSKNKGIR 222 +P ++A FT E RQ F KL +GFTD R H +YS+W S N G R Sbjct: 179 HPENNHHNAGFTDEERQGFDKLLKLGFTDTFRKVHGNVEGVYSWWAQRVRTSKDNNSGWR 238 Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 ID+ ++S + + IDT R DH P+++ +++ Sbjct: 239 IDYYIVSDRIADQVTKSEMIDTGDRK-----DHCPIMLEINL 275 >gi|94987973|ref|YP_596074.1| exodeoxyribonuclease III [Streptococcus pyogenes MGAS9429] gi|94991856|ref|YP_599955.1| exodeoxyribonuclease III [Streptococcus pyogenes MGAS2096] gi|94541481|gb|ABF31530.1| exodeoxyribonuclease III [Streptococcus pyogenes MGAS9429] gi|94545364|gb|ABF35411.1| Exodeoxyribonuclease III [Streptococcus pyogenes MGAS2096] Length = 303 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 59/283 (20%), Positives = 101/283 (35%), Gaps = 31/283 (10%) Query: 4 VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + +WN++S+ A + + + + DII +QETK K + +++L Sbjct: 29 MKLISWNIDSLNAALTGESPRALLSRAVLDTLVAQDADIIAIQETKLSAKGPTKKHIETL 88 Query: 54 -NYHIETCGQKSYN---------GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 +Y + G L K ++T Sbjct: 89 LSYFPNYLHVWRSSVEPARKGYAGTMFLYKNTLNPVITFPEIGAPTTMDAEGRIITLEFE 148 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 G+ + L+ ++P++ GDYN+ + D Sbjct: 149 DFFVTQVYTPNAGDGLRRLDDRQIWDHKYADY---LTELDAQKPVLATGDYNVAHKEIDL 205 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221 NP FT E RQ F L GFTD R H D H+Y++W + S N G Sbjct: 206 ANPSSNRRSPGFTDEERQGFTNLLARGFTDTFRHLHGDIPHVYTWWAQRSKTSKINNTGW 265 Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 RID+ + S + + I + R DHTP+++ +D+ Sbjct: 266 RIDYWLASNRLVDKVKRSEMISSGERQ-----DHTPILLDIDL 303 >gi|322386046|ref|ZP_08059685.1| exodeoxyribonuclease [Streptococcus cristatus ATCC 51100] gi|321269890|gb|EFX52811.1| exodeoxyribonuclease [Streptococcus cristatus ATCC 51100] Length = 275 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 62/283 (21%), Positives = 101/283 (35%), Gaps = 31/283 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + +WN++S+ A + + ++ N DII +QETK K + L+ L Sbjct: 1 MKLISWNIDSLNAALTSDSARAQLSQAVLRTLQAENADIIAIQETKLSAKGPTKKHLEIL 60 Query: 54 -----NYHIETCGQKS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 Y + Y G L K + IVT Sbjct: 61 EELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPIVTFPEIGAPSTMDVEGRIITLEFD 120 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 G+ + L+ ++P++ GDYN+ + D Sbjct: 121 DFFVTQVYTPNAGDGLKRLDERQVWDVKYAEY---LASLDEQKPVLATGDYNVAHKEIDL 177 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221 NP FT E R F L GFTD R H D + Y++W + S N G Sbjct: 178 ANPASNRRSPGFTDEERAGFTNLLAKGFTDTFRHLHGDIPNQYTWWAQRSKTSKINNTGW 237 Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 RID+ + S + + ID+ R DHTP+++ +++ Sbjct: 238 RIDYWLTSNRVADKVTKSDMIDSGARQ-----DHTPIVMEIEL 275 >gi|149024967|ref|ZP_01836347.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP23-BS72] gi|168494239|ref|ZP_02718382.1| exodeoxyribonuclease III [Streptococcus pneumoniae CDC3059-06] gi|147929460|gb|EDK80455.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP23-BS72] gi|183575787|gb|EDT96315.1| exodeoxyribonuclease III [Streptococcus pneumoniae CDC3059-06] Length = 275 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 58/282 (20%), Positives = 99/282 (35%), Gaps = 29/282 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDK-------NFP 46 + + +WN++S+ A + + + N DII +QETK K Sbjct: 1 MKLISWNIDSLNAALTSDSARAKLSQEVLQTLVAENADIIAIQETKLSAKGPTKKHVEIL 60 Query: 47 FETLQSLN--YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 E + + + + + P T+ Sbjct: 61 EELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAPSTMDLEGRIITLEFD 120 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 + +Y P+ + ++ +L+ E+P++ GDYN+ D Sbjct: 121 AFFVTQVYTPNAGDGLKRLEERQVWD--AKYAEYLAKLDKEKPVLATGDYNVAHNEIDLA 178 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIR 222 NP FT E R F L GFTD R H D Y++W + S N G R Sbjct: 179 NPASNRRSPGFTDEERAGFTNLLATGFTDTFRHVHGDVPERYTWWAQRSKTSKINNTGWR 238 Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 ID+ + S + + ID+ R DHTP+++ +D+ Sbjct: 239 IDYWLTSNRIADKVTKSDMIDSGARQ-----DHTPIVLEIDL 275 >gi|297205315|ref|ZP_06922711.1| exodeoxyribonuclease III [Lactobacillus jensenii JV-V16] gi|297149893|gb|EFH30190.1| exodeoxyribonuclease III [Lactobacillus jensenii JV-V16] Length = 299 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 64/286 (22%), Positives = 110/286 (38%), Gaps = 32/286 (11%) Query: 1 MSVVTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTED-------K 43 S++ + +WN++S+ A + ++ I E PDI+ +QETK Sbjct: 23 FSML-LISWNIDSLNAALTSDSARAQKTRHVLTQIAEKKPDILAIQETKLRATGPTKKHA 81 Query: 44 NFPFETLQSLNYHI---ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT 100 + Y E +K Y G L K +VT+ D Sbjct: 82 EILAKLFPDYEYVWRSSEEPARKGYAGTMYLYKNTLEPVVTYPTIGAPDTMDFEGRIITL 141 Query: 101 INTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP 160 + G + + Q+L+ E+P++ +GDYN+ + Sbjct: 142 EFPEYFVTQVYTPNAGGELKRLG---DRQGWDKKYIEYLQKLDKEKPVLASGDYNVAHEE 198 Query: 161 HDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYAD-SWSKN 218 D +P + A FT E R F +L + GFTD+ R H +YS+W + + N Sbjct: 199 IDLKHPENNHHSAGFTDEERADFTELLSTGFTDSFRKIHGNIPEVYSWWAQRIKTAKANN 258 Query: 219 KGIRIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 G RID+ + S + + +DT R DH P+++ +D+ Sbjct: 259 SGWRIDYWLTSNRIADKIKKSEMMDTGERA-----DHCPIVLEIDL 299 >gi|15901674|ref|NP_346278.1| exodeoxyribonuclease [Streptococcus pneumoniae TIGR4] gi|15903702|ref|NP_359252.1| exodeoxyribonuclease [Streptococcus pneumoniae R6] gi|111658189|ref|ZP_01408884.1| hypothetical protein SpneT_02000620 [Streptococcus pneumoniae TIGR4] gi|116516049|ref|YP_817078.1| exodeoxyribonuclease III [Streptococcus pneumoniae D39] gi|149004304|ref|ZP_01829075.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP14-BS69] gi|168483377|ref|ZP_02708329.1| exodeoxyribonuclease III [Streptococcus pneumoniae CDC1873-00] gi|194397999|ref|YP_002038432.1| exodeoxyribonuclease III [Streptococcus pneumoniae G54] gi|237649626|ref|ZP_04523878.1| exodeoxyribonuclease III [Streptococcus pneumoniae CCRI 1974] gi|237822093|ref|ZP_04597938.1| exodeoxyribonuclease III [Streptococcus pneumoniae CCRI 1974M2] gi|303258792|ref|ZP_07344772.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP-BS293] gi|303261955|ref|ZP_07347901.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP14-BS292] gi|303263817|ref|ZP_07349739.1| exodeoxyribonuclease III [Streptococcus pneumoniae BS397] gi|303265648|ref|ZP_07351547.1| exodeoxyribonuclease III [Streptococcus pneumoniae BS457] gi|303268757|ref|ZP_07354546.1| exodeoxyribonuclease III [Streptococcus pneumoniae BS458] gi|61223736|sp|P0A2X3|EXOA_STRPN RecName: Full=Exodeoxyribonuclease gi|61223737|sp|P0A2X4|EXOA_STRR6 RecName: Full=Exodeoxyribonuclease gi|153627|gb|AAA26879.1| exodeoxyribonuclease [Streptococcus pneumoniae] gi|14973347|gb|AAK75918.1| exodeoxyribonuclease [Streptococcus pneumoniae TIGR4] gi|15459332|gb|AAL00463.1| Exodeoxyribonuclease [Streptococcus pneumoniae R6] gi|116076625|gb|ABJ54345.1| exodeoxyribonuclease III [Streptococcus pneumoniae D39] gi|147757737|gb|EDK64752.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP14-BS69] gi|172043234|gb|EDT51280.1| exodeoxyribonuclease III [Streptococcus pneumoniae CDC1873-00] gi|194357666|gb|ACF56114.1| exodeoxyribonuclease III [Streptococcus pneumoniae G54] gi|302637038|gb|EFL67527.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP14-BS292] gi|302640293|gb|EFL70748.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP-BS293] gi|302641713|gb|EFL72071.1| exodeoxyribonuclease III [Streptococcus pneumoniae BS458] gi|302644775|gb|EFL75023.1| exodeoxyribonuclease III [Streptococcus pneumoniae BS457] gi|302646855|gb|EFL77080.1| exodeoxyribonuclease III [Streptococcus pneumoniae BS397] Length = 275 Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats. Identities = 58/282 (20%), Positives = 98/282 (34%), Gaps = 29/282 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDK-------NFP 46 + + +WN++S+ A + + + N DII +QETK K Sbjct: 1 MKLISWNIDSLNAALTSDSARAKLSQEVLQTLVAENADIIAIQETKLSAKGPTKKHVEIL 60 Query: 47 FETLQSLN--YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 E + + + + + P T+ Sbjct: 61 EELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAPSTMDLEGRIITLEFD 120 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 + +Y P+ + ++ L+ E+P++ GDYN+ D Sbjct: 121 AFFVTQVYTPNAGDGLKRLEERQVWD--AKYAEYLAELDKEKPVLATGDYNVAHNEIDLA 178 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIR 222 NP FT E R F L GFTD R H D Y++W + S N G R Sbjct: 179 NPASNRRSPGFTDEERAGFTNLLATGFTDTFRHVHGDVPERYTWWAQRSKTSKINNTGWR 238 Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 ID+ + S + + ID+ R DHTP+++ +D+ Sbjct: 239 IDYWLTSNRIADKVTKSDMIDSGARQ-----DHTPIVLEIDL 275 >gi|94989847|ref|YP_597947.1| exodeoxyribonuclease III [Streptococcus pyogenes MGAS10270] gi|94543355|gb|ABF33403.1| Exodeoxyribonuclease III [Streptococcus pyogenes MGAS10270] Length = 303 Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 59/283 (20%), Positives = 100/283 (35%), Gaps = 31/283 (10%) Query: 4 VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + +WN++S+ A + + + + DII +QETK K + +++L Sbjct: 29 MKLISWNIDSLNAALTGESPRALLSRAVLDTLVAQDADIIAIQETKLSAKGPTKKHIETL 88 Query: 54 -NYHIETCGQKSYN---------GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 +Y + G L K ++T Sbjct: 89 LSYFPNYLHVWRSSVEPARKGYAGTMFLYKNTLNPVITFPEIGAPTTMDAEGRIITLEFE 148 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 G+ + L+ ++P++ GDYN+ + D Sbjct: 149 DFFVTQVYTPNAGDGLRRLDDRQIWDHKYADY---LTELDAQKPVLATGDYNVAHKEIDL 205 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221 NP FT E RQ F L GFTD R H D H+Y++W + S N G Sbjct: 206 ANPSSNRRSPGFTDEERQGFTNLLARGFTDTFRHLHGDIPHVYTWWAQRSKTSKINNTGW 265 Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 RID+ + S + + I + R DHTP+ + +D+ Sbjct: 266 RIDYWLASNRLVDKVKRSEMISSGERQ-----DHTPIFLDIDL 303 >gi|241895249|ref|ZP_04782545.1| exodeoxyribonuclease III [Weissella paramesenteroides ATCC 33313] gi|241871555|gb|EER75306.1| exodeoxyribonuclease III [Weissella paramesenteroides ATCC 33313] Length = 289 Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 64/278 (23%), Positives = 107/278 (38%), Gaps = 30/278 (10%) Query: 4 VTVATWNVNSIRARIH-----NLAAW-----IKENNPDIICLQETKT--------EDKNF 45 + +WN++SI A + + W I PD++ +QETK ++ Sbjct: 14 MKFISWNIDSINAAVEHKSVRGVMTWEVLQQIALEKPDVLAIQETKLKATGLTKKQETAL 73 Query: 46 PFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT 105 Y + G+ Y+G +L++++PI + G ++ T Sbjct: 74 DELFPNYYRYLRMSTGRSGYSGTMMLTRHEPISVTMPEIGAPGEMDIEGRIITLEFENNY 133 Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165 + + R Q L+ +P+IF+GD+N+ Q D N Sbjct: 134 VSTVYTPNSGSGLARL----EDRQAWDDAYRAYVQTLDATKPVIFSGDFNVAHQEIDLKN 189 Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYAD-SWSKNKGIRI 223 P A FT E R+ F +L + GFTD R H +Y++W + S N G RI Sbjct: 190 PKSNHKKAGFTNEEREHFSQLLDAGFTDIFRYLHPDQAGVYTWWAQISKTSKINNSGWRI 249 Query: 224 DHIMLSPEATSLLHS-ARIDTKPRGWTKPSDHTPVIVS 260 D+ + S + + IDT R DH P+ + Sbjct: 250 DYYLTSNRLADQVSELSVIDTGARQ-----DHAPIKLE 282 >gi|19745558|ref|NP_606694.1| putative 3'-exo-deoxyribonuclease [Streptococcus pyogenes MGAS8232] gi|19747679|gb|AAL97193.1| putative 3'-exo-deoxyribonuclease [Streptococcus pyogenes MGAS8232] Length = 275 Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 61/283 (21%), Positives = 102/283 (36%), Gaps = 31/283 (10%) Query: 4 VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + +WN++S+ A + + + + DII +QETK K + +++L Sbjct: 1 MKLISWNIDSLNAALTGESPRALLSRAVLDTLVAQDADIIAIQETKLSAKGPTKKHIEAL 60 Query: 54 -NYHIETCGQKSYN---------GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 +Y + G L K + T Sbjct: 61 LSYFPNYLHVWRSSVEPARKGYAGTMFLYKNTLNPVSTFPEIGAPTTMDAEGRIITLEFE 120 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 G+ + L+ ++P++ AGDYN+ + D Sbjct: 121 DFFVTQVYTPNAGDGLRRLDDRQIWDHKYADY---LTELDAQKPVLAAGDYNVAHKEIDL 177 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221 NP FT E RQSF L GFTD R H D H+Y++W + S N G Sbjct: 178 ANPSSNRRSPGFTDEERQSFTNLLARGFTDTFRHLHGDIPHVYTWWAQRSKTSKINNTGW 237 Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 RID+ + S + + I + R DHTP+++ +D+ Sbjct: 238 RIDYWLASNRLVDKVKRSEMISSGERQ-----DHTPILLDIDL 275 >gi|294790372|ref|ZP_06755530.1| exodeoxyribonuclease III [Scardovia inopinata F0304] gi|294458269|gb|EFG26622.1| exodeoxyribonuclease III [Scardovia inopinata F0304] Length = 276 Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 70/281 (24%), Positives = 111/281 (39%), Gaps = 30/281 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + +WN++S+ A + + A I+ NP++I +QETK + L +L Sbjct: 1 MKFVSWNIDSLNAALLGKSDRSVQSRQVLASIRGENPEVIAIQETKLPATGPSKKHLTAL 60 Query: 54 -----NYHIETCG-----QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 +Y + +K Y G LSK + P T+ Sbjct: 61 SQFFDDYDVHWRSSVEPARKGYAGTMCLSKKGLPLVAVTEPRIHSPEPMDCEGRLQTLEF 120 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 + N+Y P+ D + R L+ +P++ GD+N+ Q D Sbjct: 121 PDFYLVNVYTPNSGDGLRRLSDRQ--LWDDAYRAYLTELDEAKPILACGDFNVAHQEIDL 178 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYA-DSWSKNKGI 221 +P + A FT E RQ F L GFTD R H Y++W A S + N G Sbjct: 179 AHPASNHHSAGFTDEERQKFTALLGAGFTDTYRYLHPNQAGAYTWWAQRAVTSKANNSGW 238 Query: 222 RIDHIMLSPEATSLLH-SARIDTKPRGWTKPSDHTPVIVSL 261 RID+ ++S S + S IDT R DH P+++ + Sbjct: 239 RIDYWLVSNRLNSRVKQSTMIDTGDRR-----DHAPILLDI 274 >gi|148989637|ref|ZP_01820969.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP6-BS73] gi|147924954|gb|EDK76036.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP6-BS73] Length = 275 Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 62/283 (21%), Positives = 98/283 (34%), Gaps = 31/283 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDK---NFPFETL 50 + + +WN++S+ A + + + N DII +QETK K E L Sbjct: 1 MKLISWNIDSLNAALTSDSARAKLSQEVLQTLVAENADIIAIQETKLSAKGPTKKHVEIL 60 Query: 51 QSL--NYHIETCGQKS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 + L Y + Y G L K + ++ Sbjct: 61 EELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAPSTMDLEGRIITLEFD 120 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 G+ + + L+ E+P++ GDYN+ D Sbjct: 121 AFFVTQVYTPNAGDGLKRLEERQVWDTKYAEY---LAELDKEKPVLATGDYNVAHNEIDL 177 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221 NP FT E R F L GFTD R H D Y++W + S N G Sbjct: 178 ANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHVHGDVPERYTWWAQRSKTSKINNTGW 237 Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 RID+ + S + + ID+ R DHTP+++ +D+ Sbjct: 238 RIDYWLTSNRIADKVTKSDMIDSGARQ-----DHTPIVLEIDL 275 >gi|295691916|ref|YP_003600526.1| exodeoxyribonuclease iii [Lactobacillus crispatus ST1] gi|295030022|emb|CBL49501.1| Exodeoxyribonuclease III [Lactobacillus crispatus ST1] Length = 275 Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 61/280 (21%), Positives = 109/280 (38%), Gaps = 25/280 (8%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTED-------KNFP 46 + + +WN++S+ A + + I + NPDII +QETK K Sbjct: 1 MILISWNIDSLNAALTGTSARAEETRQVLTKIHDANPDIIAIQETKLRATGPTKKHKEVL 60 Query: 47 FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 E +Y + + + G A + + + I + Sbjct: 61 AEKFPEYDYVWRSSEEPARKGYAGTMYLYKKGLTPAVSEPIIGAPEPMDHEGRIITLEFD 120 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 + + N + K + + Q+L+ ++P++ +GDYN D +P Sbjct: 121 KYFVTQVYTPNSGSGLKRLAERQVWDQKYIEYLQKLDEKKPVLASGDYNCAHTEIDLKHP 180 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYY-ADSWSKNKGIRID 224 + A FT E R F L N GFTD R H + +YS+W + + N G RID Sbjct: 181 ENNHHSAGFTDEERVDFTNLLNAGFTDTFRKVHGEITDVYSWWAQRVRTAKANNSGWRID 240 Query: 225 HIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 + ++S + + IDT R DH P+++ +++ Sbjct: 241 YWLVSNRIADKVVRSEMIDTGKRA-----DHCPILLEINL 275 >gi|299753114|ref|XP_001833071.2| DNA-(apurinic or apyrimidinic site) lyase [Coprinopsis cinerea okayama7#130] gi|298410149|gb|EAU88760.2| DNA-(apurinic or apyrimidinic site) lyase [Coprinopsis cinerea okayama7#130] Length = 304 Score = 131 bits (328), Expect = 1e-28, Method: Composition-based stats. Identities = 53/264 (20%), Positives = 97/264 (36%), Gaps = 37/264 (14%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETL---QSLNYHIE 58 + +ATWNV + A + +++ + DI+ L ETK D P + + + + Sbjct: 71 TLRIATWNVCGLAASMRKGFKYYVEAEDADILVLTETKVND--IPADPALKSRYPHQYWS 128 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 +K+Y G AILSK +P+ + LPG Sbjct: 129 ISDKKTYAGTAILSKVKPLHVDYKLPGHPNPK--------------------------GR 162 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 I + ++++ + + ++ + + + D P+IW D Sbjct: 163 ILTLEFENAYLIGTYVVNAGQELKTMDAKKEWQTHFEAYIRELDKKKPVIWTGDLNVAP- 221 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 + + F D R H Y++W Y S K G R+D +LS + + Sbjct: 222 -TEKEDDPERPQFVDVWRKLHPDLQHYTYWSYRFQSREKGNGWRLDMFVLSTKLVDRVKK 280 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 I + G SDH P+I+ ++ Sbjct: 281 CEIRDEIYG---ASDHVPLIMDIE 301 >gi|148993303|ref|ZP_01822843.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP9-BS68] gi|148998707|ref|ZP_01826145.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP11-BS70] gi|149006502|ref|ZP_01830201.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP18-BS74] gi|168487344|ref|ZP_02711852.1| exodeoxyribonuclease III [Streptococcus pneumoniae CDC1087-00] gi|168489877|ref|ZP_02714076.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP195] gi|168491840|ref|ZP_02715983.1| exodeoxyribonuclease III [Streptococcus pneumoniae CDC0288-04] gi|168574966|ref|ZP_02720929.1| exodeoxyribonuclease III [Streptococcus pneumoniae MLV-016] gi|182684788|ref|YP_001836535.1| exodeoxyribonuclease [Streptococcus pneumoniae CGSP14] gi|221232582|ref|YP_002511736.1| exodeoxyribonuclease [Streptococcus pneumoniae ATCC 700669] gi|225855280|ref|YP_002736792.1| exodeoxyribonuclease III [Streptococcus pneumoniae JJA] gi|303254644|ref|ZP_07340746.1| exodeoxyribonuclease [Streptococcus pneumoniae BS455] gi|307068457|ref|YP_003877423.1| exonuclease III [Streptococcus pneumoniae AP200] gi|307128039|ref|YP_003880070.1| exodeoxyribonuclease III [Streptococcus pneumoniae 670-6B] gi|147755401|gb|EDK62450.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP11-BS70] gi|147761800|gb|EDK68763.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP18-BS74] gi|147928070|gb|EDK79089.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP9-BS68] gi|182630122|gb|ACB91070.1| exodeoxyribonuclease [Streptococcus pneumoniae CGSP14] gi|183569805|gb|EDT90333.1| exodeoxyribonuclease III [Streptococcus pneumoniae CDC1087-00] gi|183571693|gb|EDT92221.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP195] gi|183573869|gb|EDT94397.1| exodeoxyribonuclease III [Streptococcus pneumoniae CDC0288-04] gi|183578942|gb|EDT99470.1| exodeoxyribonuclease III [Streptococcus pneumoniae MLV-016] gi|220675044|emb|CAR69622.1| exodeoxyribonuclease [Streptococcus pneumoniae ATCC 700669] gi|225724139|gb|ACO19992.1| exodeoxyribonuclease III [Streptococcus pneumoniae JJA] gi|301794808|emb|CBW37264.1| exodeoxyribonuclease [Streptococcus pneumoniae INV104] gi|301802537|emb|CBW35298.1| exodeoxyribonuclease [Streptococcus pneumoniae INV200] gi|302598356|gb|EFL65400.1| exodeoxyribonuclease [Streptococcus pneumoniae BS455] gi|306409994|gb|ADM85421.1| Exonuclease III [Streptococcus pneumoniae AP200] gi|306485101|gb|ADM91970.1| exodeoxyribonuclease III [Streptococcus pneumoniae 670-6B] gi|332072666|gb|EGI83149.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA17570] gi|332072995|gb|EGI83476.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA17545] Length = 275 Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 62/283 (21%), Positives = 98/283 (34%), Gaps = 31/283 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDK---NFPFETL 50 + + +WN++S+ A + + + N DII +QETK K E L Sbjct: 1 MKLISWNIDSLNAALTSDSARAKLSQEVLQTLVAENADIIAIQETKLSAKGPTKKHVEIL 60 Query: 51 QSL--NYHIETCGQKS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 + L Y + Y G L K + ++ Sbjct: 61 EELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAPSTMDLEGRIITLEFD 120 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 G+ + + L+ E+P++ GDYN+ D Sbjct: 121 AFFVTQVYTPNAGDGLKRLEERQVWDVKYAEY---LAELDKEKPVLATGDYNVAHNEIDL 177 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221 NP FT E R F L GFTD R H D Y++W + S N G Sbjct: 178 ANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHVHGDVPERYTWWAQRSKTSKINNTGW 237 Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 RID+ + S + + ID+ R DHTP+++ +D+ Sbjct: 238 RIDYWLTSNRIADKVTKSDMIDSGARQ-----DHTPIVLEIDL 275 >gi|209558893|ref|YP_002285365.1| Putative 3-exo-deoxyribonuclease [Streptococcus pyogenes NZ131] gi|209540094|gb|ACI60670.1| Putative 3-exo-deoxyribonuclease [Streptococcus pyogenes NZ131] Length = 303 Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 59/283 (20%), Positives = 101/283 (35%), Gaps = 31/283 (10%) Query: 4 VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + +WN++S+ A + + + + DII +QETK K + +++L Sbjct: 29 MKLISWNIDSLNAALTGESPRALLSRAVLDTLVAQDADIIAIQETKLSAKGPSKKHIEAL 88 Query: 54 -NYHIETCGQKSYN---------GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 +Y + G L K ++T Sbjct: 89 LSYFPNYLHVWRSSVEPARKGYAGTMFLYKNTLNPVITFPEIGAPTTMDAEGRIITLEFE 148 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 G+ + L+ ++P++ GDYN+ + D Sbjct: 149 DFFVTQVYTPNAGDGLRRLDDRQIWDHKYADY---LTELDAQKPVLATGDYNVAHKEIDL 205 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221 NP FT E RQ F L GFTD R H D H+Y++W + S N G Sbjct: 206 ANPSSNRRSPGFTDEERQGFTNLLARGFTDTFRHLHGDIPHVYTWWAQRSKTSKINNTGW 265 Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 RID+ + S + + I + R DHTP+++ +D+ Sbjct: 266 RIDYWLASNRIVDKVKRSEMISSGERQ-----DHTPILLDIDL 303 >gi|170088468|ref|XP_001875457.1| predicted protein [Laccaria bicolor S238N-H82] gi|164650657|gb|EDR14898.1| predicted protein [Laccaria bicolor S238N-H82] Length = 343 Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats. Identities = 62/286 (21%), Positives = 113/286 (39%), Gaps = 33/286 (11%) Query: 3 VVTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETC 60 V +ATWN+ + A + +++ +PDI+ L ETK D + Y + Sbjct: 62 TVRLATWNICGLAASQKKGFKYYVEAEDPDILVLTETKVNDVPNDPALTKRFPYAYWSIS 121 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +KSY+G AILSK++P+ + LPG + T+ + + Y+ + Sbjct: 122 SKKSYSGTAILSKHEPLSVTRVLPG--HPDPSHVKGRIITLEFENFYVVGTYVVNAGTDL 179 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII------------ 168 T + K + + L+ ++P+I+ GD N+ P Y Sbjct: 180 KTLDEKKEWNVH--FDAYIRDLDSKKPVIWTGDLNVAPTEMGMYCNHPFGPRLITAADLA 237 Query: 169 -----WENDACFTLEVRQSFQ-------KLQNMGFTDAIRATHDTHHLYSFWDYYADSWS 216 W A +T +F+ + F D R H Y+++ Y + + Sbjct: 238 NPKKKWNKTAGYTEAETTAFRKILASPDDISANKFVDVWRQLHPEDRHYTYFSYRFNCRT 297 Query: 217 KNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 K G R+D +LS + I ++ G SDH P+++ ++ Sbjct: 298 KGLGWRLDMFVLSERMMERVKMCEIRSEIYG---ASDHCPLVMEIE 340 >gi|319947397|ref|ZP_08021629.1| exodeoxyribonuclease [Streptococcus australis ATCC 700641] gi|319746337|gb|EFV98598.1| exodeoxyribonuclease [Streptococcus australis ATCC 700641] Length = 275 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 60/282 (21%), Positives = 101/282 (35%), Gaps = 29/282 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDK-------NFP 46 + + +WN++S+ A + ++ + N DII +QETK K Sbjct: 1 MKLISWNIDSLNAALTSDSARAKLSQDVLLTLVAENADIIAIQETKLSAKGPTKKHLEVL 60 Query: 47 FETLQSLN--YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 E + + + + + P T+ Sbjct: 61 EELFPGYENTWRSSVEPARKGYAGTMFLYKKELTPRVTFPEIGAPSTMDVEGRIITLEFD 120 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 + +Y P+ + +I L+ ++P++ GDYN+ + D Sbjct: 121 DFFVTQVYTPNAGDGLKRLEERQIWD--AKYADYLAELDQQKPVLATGDYNVAHKEIDLA 178 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIR 222 NP FT E R F L GFTD R H D Y++W + S N G R Sbjct: 179 NPASNRRSPGFTDEERAGFTNLLAKGFTDTFRHLHGDLPDQYTWWAQRSKTSKINNTGWR 238 Query: 223 IDHIMLSPEATSLL-HSARIDTKPRGWTKPSDHTPVIVSLDI 263 ID+ + S + SA ID+ R DHTP+++ +D+ Sbjct: 239 IDYWLTSNRIADKVTKSAMIDSGARQ-----DHTPIVMEIDL 275 >gi|317509131|ref|ZP_07966757.1| exodeoxyribonuclease III [Segniliparus rugosus ATCC BAA-974] gi|316252567|gb|EFV12011.1| exodeoxyribonuclease III [Segniliparus rugosus ATCC BAA-974] Length = 267 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 61/269 (22%), Positives = 98/269 (36%), Gaps = 19/269 (7%) Query: 7 ATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKNFPFE----TLQSLNY 55 AT NVN +RA + L W+ E+ + ICLQE + + Sbjct: 2 ATVNVNGVRAAVKARSEENTGLLGWLGESPAEYICLQEVRATEAEARAALAPVLADGWKL 61 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + QK +GVAILS+ +P + R+IEA F + +LYLP Sbjct: 62 ALAPAAQKGRSGVAILSRREPDAVRIGFGDPQFADSGRYIEADFGT----FTLASLYLPS 117 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 G + + +K ++K F + ++ GD+NI D N + F Sbjct: 118 GE-AETERQVEKDQFLKTFGEYLKPLARKRRDVLICGDWNIAHTELDIKNWKGNLKASGF 176 Query: 176 TLEVRQSFQKLQNMGFTDA---IRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 R ++ G YS+W + ++ + G RID+ + + + Sbjct: 177 LPHERAWLSEVFGEGSDWTDVQRSFHPGEAGPYSWWSFRGQAFDNDSGWRIDYHVANKQL 236 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 R + SDH PVIV Sbjct: 237 AKRAARVVTQRAERYDLRWSDHAPVIVEY 265 >gi|224074261|ref|XP_002304326.1| predicted protein [Populus trichocarpa] gi|222841758|gb|EEE79305.1| predicted protein [Populus trichocarpa] Length = 617 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 59/344 (17%), Positives = 103/344 (29%), Gaps = 64/344 (18%) Query: 2 SVVTVATWNVNSIRARIHNLA---AWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 + + + ++NVN +R R+ + + DIIC QETK + + + + Y Sbjct: 3 NPIKIVSYNVNGLRQRVSQFGSLSNLLNTFDADIICFQETKLRRQELTSDLVIADGYESF 62 Query: 59 TCGQKS-------YNGVAILSKYQPIEIVT----------HLPGDDLDVQARFIEATFT- 100 ++ Y+GVA + + T G + F Sbjct: 63 FSCTRTKDKGRTGYSGVATFCRVKSAFSSTEVALPVAAEEGFTGFIDRCKRNEGLEEFEK 122 Query: 101 --------------INTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEE 146 + + NLY P + + + K+ + K + L Sbjct: 123 DELVKVDSEGRCVVTDHNHFVLFNLYGPRAAHDDTERIEFKMKFFKILQKRWENLLHEGR 182 Query: 147 PLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYS 206 + GD NI P D + F R + D Y+ Sbjct: 183 RVFVVGDLNIAPTAMDRCDADSDFEKNEFRRWFRSILMMSGGLFVDVFRAKHPDRREAYT 242 Query: 207 FWDYYADSWSKNKGIRIDHIMLSPE-------------ATSLLHSARIDTKPRGWT---- 249 W + N G RIDHI+ + + + I T+ + W Sbjct: 243 CWSSSTGAELFNFGSRIDHILCAGPCLHQEHDLQGHNFLSCHVKECDILTQYKRWKPGDS 302 Query: 250 -----------KPSDHTPVIVSL-DIPEPRKKQQDSTSQNMKPI 281 + SDH PV +SL +I + + S P+ Sbjct: 303 TRWKGGRGIKLEGSDHAPVYMSLEEICDIPRHSTPPLSARYLPM 346 >gi|15674547|ref|NP_268721.1| putative 3'-exo-deoxyribonuclease [Streptococcus pyogenes M1 GAS] gi|13621652|gb|AAK33442.1| putative 3'-exo-deoxyribonuclease [Streptococcus pyogenes M1 GAS] Length = 275 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 59/283 (20%), Positives = 101/283 (35%), Gaps = 31/283 (10%) Query: 4 VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + +WN++S+ A + + + + DII +QETK K + +++L Sbjct: 1 MKLISWNIDSLNAALTGESPRALLSRAVLDTLVAQDADIIAIQETKLSAKGPTKKHIETL 60 Query: 54 -NYHIETCGQKSYN---------GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 +Y + G L K ++T Sbjct: 61 LSYFPNYLHVWRSSVEPARKGYAGTMFLYKNTLNPVITFPEIGAPTTMDAEGRIITLEFE 120 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 G+ + L+ ++P++ GDYN+ + D Sbjct: 121 DFFVTQVYTPNAGDGLRRLDDRQIWDHKYADY---LTELDAQKPVLATGDYNVAHKEIDL 177 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221 NP FT E RQ F L GFTD R H D H+Y++W + S N G Sbjct: 178 ANPNSNRRSPGFTDEERQGFTNLLARGFTDTFRHVHGDIPHVYTWWAQRSKTSKINNTGW 237 Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 RID+ + S + + I + R DHTP+++ +D+ Sbjct: 238 RIDYWLASNRLVDKVKRSEMISSGERQ-----DHTPILLDIDL 275 >gi|55823454|ref|YP_141895.1| 3'-exo-deoxyribonuclease [Streptococcus thermophilus CNRZ1066] gi|55739439|gb|AAV63080.1| 3'-exo-deoxyribonuclease [Streptococcus thermophilus CNRZ1066] Length = 275 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 59/282 (20%), Positives = 102/282 (36%), Gaps = 29/282 (10%) Query: 4 VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDK-------NFP 46 + + +WN++S+ A + + + N DII +QETK K Sbjct: 1 MKLISWNIDSLNAALTGDSARAQLSRAVIDTLVTENADIIAIQETKLSAKGPTKKHLQIL 60 Query: 47 FETLQSL--NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 + + + + + + V P T+ Sbjct: 61 EDYFPDYVITWRSSVEPARKGYAGTMFLYKKELTPVITYPEIGAPSTMDCEGRIITLEFD 120 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 T + +Y P+ + +I L+ ++P++ GDYN+ + D Sbjct: 121 TFFVTQVYTPNAGDGLKRLLERQIWD--EKYADYLAELDAQKPVLATGDYNVAHKEIDLA 178 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIR 222 NP FT E R F L N GFTD R + D Y++W + S N G R Sbjct: 179 NPSSNRRSPGFTDEERAGFTNLLNKGFTDTYRHLNGDVTGAYTWWAQRSKTSKINNTGWR 238 Query: 223 IDHIMLSPEATSLLHSA-RIDTKPRGWTKPSDHTPVIVSLDI 263 ID+ + S + + ID+ R DHTP+++ +D+ Sbjct: 239 IDYWLTSNRIADKVIKSNMIDSGDRQ-----DHTPIVLEIDL 275 >gi|315037291|ref|YP_004030859.1| Exodeoxyribonuclease III [Lactobacillus amylovorus GRL 1112] gi|325955769|ref|YP_004286379.1| Exodeoxyribonuclease III [Lactobacillus acidophilus 30SC] gi|312275424|gb|ADQ58064.1| Exodeoxyribonuclease III [Lactobacillus amylovorus GRL 1112] gi|325332334|gb|ADZ06242.1| Exodeoxyribonuclease III [Lactobacillus acidophilus 30SC] gi|327182596|gb|AEA31043.1| Exodeoxyribonuclease III [Lactobacillus amylovorus GRL 1118] Length = 275 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 62/280 (22%), Positives = 106/280 (37%), Gaps = 25/280 (8%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTED-------KNFP 46 + + +WN++S+ A + + I + NPDII +QETK + Sbjct: 1 MILISWNIDSLNAALTGTSARAEETRQVLDKIHDANPDIIAIQETKLRATGPTKKHQTVL 60 Query: 47 FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 E +Y + + + G A E+ + V I Sbjct: 61 AEKFPEYDYVWRSSEEPARKGYAGTMYLYKKELTPKASYPTIGVPDTMDAEGRIITLDFD 120 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 + + N + K +L+ E+P++ +GDYN D +P Sbjct: 121 KFFVTQVYTPNSGSGLKRLADRQVWDEKYTEYLHKLDQEKPVLASGDYNCAHTEIDLKHP 180 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYY-ADSWSKNKGIRID 224 + A FT E R F L N GFTD R H D +YS+W + + N G RID Sbjct: 181 ENNHHSAGFTDEERVDFTNLLNAGFTDTFRKVHGDITDVYSWWAQRVRTAKANNSGWRID 240 Query: 225 HIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 + ++S + + +DT R DH P+++ +++ Sbjct: 241 YWLVSNRIADKVVRSEMMDTGKRA-----DHCPILLEINL 275 >gi|262283107|ref|ZP_06060874.1| exodeoxyribonuclease III [Streptococcus sp. 2_1_36FAA] gi|262261359|gb|EEY80058.1| exodeoxyribonuclease III [Streptococcus sp. 2_1_36FAA] Length = 275 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 59/283 (20%), Positives = 99/283 (34%), Gaps = 31/283 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + +WN++S+ A + + ++ + DII +QETK + L+ L Sbjct: 1 MKLISWNIDSLNAALTSDSARAQLSQAVLQTLQAEDADIIAIQETKLSATGPTKKHLEIL 60 Query: 54 -----NYHIETCGQKS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 Y + Y G L K + VT Sbjct: 61 ANLFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTVTFPEIGAPSTMDVEGRIITLEFD 120 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 G+ + L+ ++P++ GDYN+ + D Sbjct: 121 DFFVTQVYTPNAGDGLKRLD---DRQVWDAKYAEYLATLDQQKPVLATGDYNVAHKEIDL 177 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221 NP FT E R F L GFTD R H D + Y++W + S N G Sbjct: 178 ANPASNRRSPGFTDEERAGFTNLLAKGFTDTFRHLHGDIPNQYTWWAQRSKTSKINNTGW 237 Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 RID+ + S + + ID+ R DHTP+++ +++ Sbjct: 238 RIDYWLTSNRVADKVTKSDMIDSGARQ-----DHTPIVMEIEL 275 >gi|259500789|ref|ZP_05743691.1| exodeoxyribonuclease III [Lactobacillus iners DSM 13335] gi|302190760|ref|ZP_07267014.1| exonuclease III [Lactobacillus iners AB-1] gi|312871137|ref|ZP_07731235.1| exodeoxyribonuclease III [Lactobacillus iners LEAF 3008A-a] gi|312872693|ref|ZP_07732758.1| exodeoxyribonuclease III [Lactobacillus iners LEAF 2062A-h1] gi|312874955|ref|ZP_07734974.1| exodeoxyribonuclease III [Lactobacillus iners LEAF 2053A-b] gi|329919752|ref|ZP_08276703.1| exodeoxyribonuclease III [Lactobacillus iners SPIN 1401G] gi|259167483|gb|EEW51978.1| exodeoxyribonuclease III [Lactobacillus iners DSM 13335] gi|311089700|gb|EFQ48125.1| exodeoxyribonuclease III [Lactobacillus iners LEAF 2053A-b] gi|311091735|gb|EFQ50114.1| exodeoxyribonuclease III [Lactobacillus iners LEAF 2062A-h1] gi|311093151|gb|EFQ51497.1| exodeoxyribonuclease III [Lactobacillus iners LEAF 3008A-a] gi|328937099|gb|EGG33527.1| exodeoxyribonuclease III [Lactobacillus iners SPIN 1401G] Length = 275 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 60/280 (21%), Positives = 109/280 (38%), Gaps = 25/280 (8%) Query: 4 VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDK-------NFP 46 + +WN++S+ A + + IKE NPD++ +QETK + Sbjct: 1 MLFISWNIDSLNAALTGDSDRAHETRSVLNKIKEANPDVVAIQETKLRANGPTKKHCDIL 60 Query: 47 FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 + + Y + + + A + + + I + Sbjct: 61 ADIFEDYQYVWRSSQEPARKSYAGTMFLYKKNYHPQVTYPLIGAPDTMDQEGRIITLEFD 120 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 + N K + +L+ +P+I +GDYN+ Q D +P Sbjct: 121 TFYLTQVYTPNSGNELKRLADREIWDTKYQEYLAKLDQNKPVIASGDYNVAHQEIDLKHP 180 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYY-ADSWSKNKGIRID 224 ++A FT E R+ F KL ++GF D R + D +YS+W S + N G RID Sbjct: 181 ETNHHNAGFTDEERKGFSKLLSLGFIDTFRYINGDITDVYSWWSQRIRTSKTNNAGWRID 240 Query: 225 HIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 + ++S + ++ IDT R DH P+++ +D+ Sbjct: 241 YYLVSQRLADKIEQSKMIDTGDRK-----DHCPILLKIDL 275 >gi|306824688|ref|ZP_07458032.1| exodeoxyribonuclease III [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304432899|gb|EFM35871.1| exodeoxyribonuclease III [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 275 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 60/283 (21%), Positives = 101/283 (35%), Gaps = 31/283 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + +WN++S+ A + + + N DII +QETK K + L+ L Sbjct: 1 MKLISWNIDSLNAALTSDSARAKLSQEVLQILVAENADIIAIQETKLSAKGPTKKHLEIL 60 Query: 54 -----NYHIETCGQKS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 Y + Y G L K + ++ Sbjct: 61 EELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAPSTMDLEGRIITLEFD 120 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 G+ + + +L+ E+P++ GDYN+ + D Sbjct: 121 TFFVTQVYTPNAGDGLKRLEERQVWDVKYAEY---LAQLDKEKPVLATGDYNVAHKEIDL 177 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221 NP FT E R F L GFTD R H D Y++W + S N G Sbjct: 178 ANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHIHGDVPERYTWWAQRSKTSKINNTGW 237 Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 RID+ + S + + + ID+ R DHTP+++ +++ Sbjct: 238 RIDYWLTSNRVSDKVTKSDMIDSGARQ-----DHTPIVLEIEL 275 >gi|116628238|ref|YP_820857.1| 3'-exo-deoxyribonuclease [Streptococcus thermophilus LMD-9] gi|116101515|gb|ABJ66661.1| Exonuclease III [Streptococcus thermophilus LMD-9] gi|312278865|gb|ADQ63522.1| Exonuclease III [Streptococcus thermophilus ND03] Length = 275 Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats. Identities = 58/282 (20%), Positives = 101/282 (35%), Gaps = 29/282 (10%) Query: 4 VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDK-------NFP 46 + + +WN++S+ A + + + N DII +QETK K Sbjct: 1 MKLISWNIDSLNAALTGDSTRAQLSRAVIDTLVTENADIIAIQETKLSAKGPTKKHLQIL 60 Query: 47 FETLQSL--NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 + + + + + + V P T+ Sbjct: 61 EDYFPDYVITWRSSVEPARKGYAGTMFLYKKELTPVITYPEIGAPSTMDCEGRIITLEFD 120 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 T + +Y P+ + +I L+ ++P++ GDYN+ + D Sbjct: 121 TFFVTQVYTPNAGDGLKRLLERQIWD--EKYADYLAELDAQKPVLATGDYNVAHKEIDLA 178 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIR 222 NP FT E R F L N GF D R + D Y++W + S N G R Sbjct: 179 NPSSNRRSPGFTDEERAGFTNLLNKGFIDTYRHLNGDVTGAYTWWAQRSKTSKINNTGWR 238 Query: 223 IDHIMLSPEATSLLHSA-RIDTKPRGWTKPSDHTPVIVSLDI 263 ID+ + S + + ID+ R DHTP+++ +D+ Sbjct: 239 IDYWLTSNRIADKVIKSNMIDSGDRQ-----DHTPIVLEIDL 275 >gi|313891277|ref|ZP_07824895.1| exodeoxyribonuclease III [Streptococcus pseudoporcinus SPIN 20026] gi|313120344|gb|EFR43465.1| exodeoxyribonuclease III [Streptococcus pseudoporcinus SPIN 20026] Length = 275 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 60/283 (21%), Positives = 102/283 (36%), Gaps = 31/283 (10%) Query: 4 VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFETLQ-S 52 + + +WN++S+ A + + + + DII +QETK + L+ Sbjct: 1 MKLISWNIDSLNAALTGESPRALLSRAVIDRLVSEDADIIAIQETKLSATGPTKKHLETI 60 Query: 53 LNYHIETCGQKSYN---------GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 L+Y + G L K +VT Sbjct: 61 LSYFPNYLHVWRSSVEPARKGYAGTMFLYKQTLNPVVTFPEIGAPTTMDSEGRIITLEFE 120 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 G+ + + +L+ ++P++ GDYN+ + D Sbjct: 121 DFFVTQVYTPNAGDGLRRLADRQEWDIKYADY---LTQLDAQKPVLATGDYNVAHKEIDL 177 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221 NP A FT E R F L GFTD R H D ++Y++W + S N G Sbjct: 178 ANPSSNRRSAGFTDEERAGFTALLEKGFTDTFRHLHGDLPNVYTWWAQRSKTSKMNNTGW 237 Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 RID+ + S + + ID+ R DHTP+++ +D+ Sbjct: 238 RIDYWLTSNRIADKVLKSEMIDSGARQ-----DHTPILLEIDL 275 >gi|268318601|ref|YP_003292257.1| exodeoxyribonuclease [Lactobacillus johnsonii FI9785] gi|262396976|emb|CAX65990.1| exodeoxyribonuclease [Lactobacillus johnsonii FI9785] Length = 275 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 65/282 (23%), Positives = 114/282 (40%), Gaps = 29/282 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTED-------KNFP 46 + + +WN++S+ A + ++ IKE + DII +QETK + Sbjct: 1 MRLISWNIDSLNAALTSDSPRAQLTRSVLNTIKEKDADIIAIQETKLRSTGPTKKHQEVL 60 Query: 47 FETLQSLNYHIETCGQKSY--NGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 E + +Y + + + + + P + T+ Sbjct: 61 AEMFPNYDYVWRSSEEPARKGYAGTMFLYKNTLTPEVTKPAIGAPDTMDYEGRILTLEFD 120 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 + +Y P+ D +I Q+L+ +P+I +GDYN+ P D Sbjct: 121 NYYVTQVYTPNSGNELKRLEDRQIWD--EKYTEYLQKLDKSKPVIASGDYNVAHTPIDLK 178 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYY-ADSWSKNKGIR 222 +P ++A FT E RQ F KL +GFTD R H +YS+W S + N G R Sbjct: 179 HPENNHHNAGFTDEERQDFDKLLKLGFTDTFRKVHGNIEGVYSWWAQRVRTSKANNSGWR 238 Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 ID+ ++S + + IDT R DH P+++ +++ Sbjct: 239 IDYYIVSDRIADQVTKSEMIDTGDRK-----DHCPIMLEINL 275 >gi|55821526|ref|YP_139968.1| 3'-exo-deoxyribonuclease [Streptococcus thermophilus LMG 18311] gi|55737511|gb|AAV61153.1| 3'-exo-deoxyribonuclease [Streptococcus thermophilus LMG 18311] Length = 275 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 58/282 (20%), Positives = 102/282 (36%), Gaps = 29/282 (10%) Query: 4 VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDK-------NFP 46 + + +WN++S+ A + + + N DII +QETK K Sbjct: 1 MKLISWNIDSLNAALTGDSARAQLSRAVIDTLVTENADIIAIQETKLSAKGPTKKHLQIL 60 Query: 47 FETLQSL--NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 + + + + + + V P T+ Sbjct: 61 EDYFPDYVITWRSSVEPARKGYAGTMFLYKKELTPVITYPEIGAPSTMDCEGRIITLEFD 120 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 T + +Y P+ + +I + L+ ++P++ GDYN+ + D Sbjct: 121 TFFVTQVYTPNAGDGLKRLLERQIWD--KKYADYLAELDAQKPVLATGDYNVAHKEIDLA 178 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIR 222 NP FT E R F L N GF D R + D Y++W + S N G R Sbjct: 179 NPSSNRRSPGFTDEERAGFTNLLNKGFIDTYRHLNGDVTGAYTWWAQRSKTSKINNTGWR 238 Query: 223 IDHIMLSPEATSLLHSA-RIDTKPRGWTKPSDHTPVIVSLDI 263 ID+ + S + + ID+ R DHTP+++ +D+ Sbjct: 239 IDYWLTSNRIADKVIKSNMIDSGDRQ-----DHTPIVLEIDL 275 >gi|289167379|ref|YP_003445648.1| exodeoxyribonuclease III [Streptococcus mitis B6] gi|288906946|emb|CBJ21780.1| exodeoxyribonuclease III [Streptococcus mitis B6] Length = 275 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 62/283 (21%), Positives = 99/283 (34%), Gaps = 31/283 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + +WN++S+ A + + + N DII +QETK K + L+ L Sbjct: 1 MKLISWNIDSLNAALTSDSARAKLSQEVLQTLVAENADIIAIQETKLSAKGPTKKHLEIL 60 Query: 54 -----NYHIETCGQKS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 Y + Y G L K + VT Sbjct: 61 EELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTVTFPEIGAPSTMDLEGRIITLEFD 120 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 + G+ + + L+ E+P++ GDYN+ D Sbjct: 121 EFFVTQVYTPNAGDGLKRLEERQVWDVKYAEY---LAELDKEKPVLATGDYNVAHNEIDL 177 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221 NP FT E R F L GFTD R H D Y++W + S N G Sbjct: 178 ANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHIHGDVPERYTWWAQRSKTSKINNTGW 237 Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 RID+ + S + + ID+ R DHTP+++ +++ Sbjct: 238 RIDYWLTSNRVADKVTKSDMIDSGARQ-----DHTPIVMEIEL 275 >gi|309806468|ref|ZP_07700473.1| exodeoxyribonuclease III [Lactobacillus iners LactinV 03V1-b] gi|308167141|gb|EFO69315.1| exodeoxyribonuclease III [Lactobacillus iners LactinV 03V1-b] Length = 275 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 60/280 (21%), Positives = 109/280 (38%), Gaps = 25/280 (8%) Query: 4 VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDK-------NFP 46 + +WN++S+ A + + IKE NPD++ +QETK + Sbjct: 1 MLFISWNIDSLNAALTGDSDRAHETRSVLNKIKEANPDVVAIQETKLRANGPTKKHCDIL 60 Query: 47 FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 + + Y + + + A + + + I + Sbjct: 61 ADIFEDYQYVWRSSQEPARKSYAGTMFLYKKNYHPQVSYPLIGAPDTMDQEGRIITLEFD 120 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 + N K + +L+ +P+I +GDYN+ Q D +P Sbjct: 121 TFYLTQVYTPNSGNELKRLADREIWDTKYQEYLAKLDQNKPVIASGDYNVAHQEIDLKHP 180 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYY-ADSWSKNKGIRID 224 ++A FT E R+ F KL ++GF D R + D +YS+W S + N G RID Sbjct: 181 ETNHHNAGFTDEERKGFSKLLSLGFIDTFRYINGDITDVYSWWSQRIRTSKTNNAGWRID 240 Query: 225 HIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 + ++S + ++ IDT R DH P+++ +D+ Sbjct: 241 YYLVSQRLADKIEQSKMIDTGDRK-----DHCPILLKIDL 275 >gi|256851697|ref|ZP_05557085.1| exodeoxyribonuclease III [Lactobacillus jensenii 27-2-CHN] gi|260661585|ref|ZP_05862497.1| exodeoxyribonuclease III [Lactobacillus jensenii 115-3-CHN] gi|282934219|ref|ZP_06339496.1| exodeoxyribonuclease III [Lactobacillus jensenii 208-1] gi|256615655|gb|EEU20844.1| exodeoxyribonuclease III [Lactobacillus jensenii 27-2-CHN] gi|260547642|gb|EEX23620.1| exodeoxyribonuclease III [Lactobacillus jensenii 115-3-CHN] gi|281301693|gb|EFA93960.1| exodeoxyribonuclease III [Lactobacillus jensenii 208-1] Length = 275 Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats. Identities = 63/283 (22%), Positives = 108/283 (38%), Gaps = 31/283 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTED-------KNFP 46 + + +WN++S+ A + ++ I E PDI+ +QETK Sbjct: 1 MLLISWNIDSLNAALTSDSARAQKTRHVLTQIAEKKPDILAIQETKLRATGPTKKHAEIL 60 Query: 47 FETLQSLNYHI---ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 + Y E +K Y G L K +VT+ D Sbjct: 61 AKLFPDYEYVWRSSEEPARKGYAGTMYLYKNTLEPVVTYPTIGAPDTMDFEGRIITLEFP 120 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 + G + + Q+L+ E+P++ +GDYN+ + D Sbjct: 121 EYFVTQVYTPNAGGELKRLG---DRQGWDKKYIEYLQKLDKEKPVLASGDYNVAHEEIDL 177 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYAD-SWSKNKGI 221 +P + A FT E R F +L + GFTD+ R H +YS+W + + N G Sbjct: 178 KHPENNHHSAGFTDEERADFTELLSTGFTDSFRKIHGNIPEVYSWWAQRIKTAKANNSGW 237 Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 RID+ + S + + +DT R DH P+++ +D+ Sbjct: 238 RIDYWLTSNRIADKIKKSEMMDTGERA-----DHCPIVLEIDL 275 >gi|21909832|ref|NP_664100.1| putative 3'-exo-deoxyribonuclease [Streptococcus pyogenes MGAS315] gi|21904018|gb|AAM78903.1| putative 3'-exo-deoxyribonuclease [Streptococcus pyogenes MGAS315] Length = 275 Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 59/283 (20%), Positives = 101/283 (35%), Gaps = 31/283 (10%) Query: 4 VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + +WN++S+ A + + + + DII +QETK K + +++L Sbjct: 1 MKLISWNIDSLNAALTGESPRALLSRAVLDTLVAQDADIIAIQETKLSAKGPTKKHIEAL 60 Query: 54 -NYHIETCGQKSYN---------GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 +Y + G L K ++T Sbjct: 61 LSYFPNYLHVWRSSVEPARKGYAGTMFLYKNTLNPVITFPEIGAPTTMDAEGRIITLEFE 120 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 G+ + L+ ++P++ GDYN+ + D Sbjct: 121 DFFVTQVYTPNAGDGLRRLDDRQIWDHKYADY---LTELDAQKPVLATGDYNVAHKEIDL 177 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221 NP FT E RQ F L GFTD R H D H+Y++W + S N G Sbjct: 178 ANPSSNRRSPGFTDEERQGFTNLLARGFTDTFRHVHGDIPHVYTWWAQRSKTSKINNTGW 237 Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 RID+ + S + + I + R DHTP+++ +D+ Sbjct: 238 RIDYWLASNRIVDKVKRSEMISSGERQ-----DHTPILLDIDL 275 >gi|307707550|ref|ZP_07644032.1| exodeoxyribonuclease III [Streptococcus mitis NCTC 12261] gi|307616502|gb|EFN95693.1| exodeoxyribonuclease III [Streptococcus mitis NCTC 12261] Length = 275 Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 60/283 (21%), Positives = 98/283 (34%), Gaps = 31/283 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDK-------NFP 46 + + +WN++S+ A + + + N DII +QETK K Sbjct: 1 MKLISWNIDSLNAALTSDSTRAKLSQEVLQTLVAENADIIAIQETKLSAKGPTKKHLEIL 60 Query: 47 FETLQSLNYHIETCGQKS---YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 E + + + Y G L K + VT Sbjct: 61 EELFPDYENKWRSSQEPARKGYAGTMFLYKKELTPTVTFPEIGAPSTMDLEGRIITLEFD 120 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 + G+ + + L+ E+P++ +GDYN+ D Sbjct: 121 KFFVTQVYTPNTGDGLKRLEERQIWDVKYAEY---LAELDKEKPVLASGDYNVAHNEIDL 177 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221 NP FT E R F L GFTD R H D Y++W + S N G Sbjct: 178 ANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHIHGDVPERYTWWAQRSKTSKINNTGW 237 Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 RID+ + S + + ID+ R DHTP+++ +++ Sbjct: 238 RIDYWLTSNRIADKVTKSDMIDSGARQ-----DHTPIVLEIEL 275 >gi|312873321|ref|ZP_07733376.1| exodeoxyribonuclease III [Lactobacillus iners LEAF 2052A-d] gi|311091201|gb|EFQ49590.1| exodeoxyribonuclease III [Lactobacillus iners LEAF 2052A-d] Length = 275 Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 63/282 (22%), Positives = 115/282 (40%), Gaps = 29/282 (10%) Query: 4 VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDK-------NFP 46 + +WN++S+ A + + IKE NPD++ +QETK + Sbjct: 1 MLFISWNIDSLNAALTGDSDRAHETRSVLNKIKEANPDVVAIQETKLRANGPTKKHCDIL 60 Query: 47 FETLQSLNYHIETCGQKSY--NGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 + + Y + + + + + P T+ Sbjct: 61 ADIFEDYQYVWRSSQEPARKSYAGTMFLYKKNYHPQVSYPLIGAPDTMDQEGRIITLEFN 120 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 + + +Y P+ D +I K + +L+ +P+I +GDYN+ Q D Sbjct: 121 SFYLTQVYTPNSGNELKRLADREIWDTK--YQEYLTKLDQNKPVIASGDYNVAHQEIDLK 178 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYY-ADSWSKNKGIR 222 +P ++A FT E R+ F KL ++GF D R + D +YS+W S + N G R Sbjct: 179 HPETNHHNAGFTDEERKGFSKLLSLGFIDTFRYINGDITDVYSWWSQRIRTSKTNNAGWR 238 Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 ID+ ++S + ++ IDT R DH P+++ +D+ Sbjct: 239 IDYYLVSQRLADKIEQSKMIDTGDRK-----DHCPILLKIDL 275 >gi|50913711|ref|YP_059683.1| exodeoxyribonuclease III [Streptococcus pyogenes MGAS10394] gi|50902785|gb|AAT86500.1| Exodeoxyribonuclease III [Streptococcus pyogenes MGAS10394] Length = 303 Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 60/282 (21%), Positives = 101/282 (35%), Gaps = 31/282 (10%) Query: 4 VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + +WN++S+ A + + + + DII +QETK K + +++L Sbjct: 29 MKLISWNIDSLNAALTGESPRALLSRAVLDTLVAQDADIIAIQETKLSAKGPTKKHIEAL 88 Query: 54 -NYHIETCGQKSYN---------GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 +Y + G L K ++T D Sbjct: 89 LSYFPNYLHVWRSSVEPARKGYAGTMFLYKNTLNPVITFPEIDAPTTMDAEGRIITLEFE 148 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 G+ + L+ ++P++ GDYN+ + D Sbjct: 149 DFFVTQVYTPNAGDGLRRLDDRQIWDHKYADY---LTELDAQKPVLATGDYNVAHKEIDL 205 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221 NP FT E RQ F L GFTD R H D H+Y++W + S N G Sbjct: 206 ANPSSNRRSPGFTDEERQGFTNLLARGFTDTFRHLHGDIPHVYTWWAQRSKTSKINNTGW 265 Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLD 262 RID+ + S + + I + R DHTP+++ +D Sbjct: 266 RIDYWLASNRLVDKVKRSEMISSGERQ-----DHTPILLDID 302 >gi|159113893|ref|XP_001707172.1| Endonuclease/Exonuclease/phosphatase [Giardia lamblia ATCC 50803] gi|157435275|gb|EDO79498.1| Endonuclease/Exonuclease/phosphatase [Giardia lamblia ATCC 50803] Length = 322 Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 57/283 (20%), Positives = 95/283 (33%), Gaps = 29/283 (10%) Query: 5 TVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL---------- 53 T+ NVN IR+ L +I + NPDI+C ETK F + Sbjct: 40 TILAINVNGIRSAFSKGLKDFIHKKNPDIVCFSETKLGSSAFAAFMEKEATRDPDTGVYT 99 Query: 54 ---NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 Y C + G A + + + + E F + Sbjct: 100 VMKGYKHVFCCSTAKQGYASTAMFAKESVPVLDLCMQMGDPEFDSEGRFLHVSLPSFELI 159 Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQR-----------LELEEPLIFAGDYNIIPQ 159 + S+ L + + + +++ GD N+ Sbjct: 160 HVYAPNSGRGSSGKAFTSKNRPANLSTRIKYEKLISKYIGNLVAAGKDVVYCGDLNVAHN 219 Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMG-FTDAIRATHDTHHLYSFWDYYADSWSKN 218 D YNP FT E R +F KL + DA RA H YS++ + + + Sbjct: 220 EIDLYNPKSNHFSPGFTDEERNAFSKLLDGHGLIDAFRAMHPHRINYSWFSNFGRAREQK 279 Query: 219 KGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 G RID+ +++ + + + I SDH P+I++L Sbjct: 280 HGWRIDYFVVTSKIFKRVTTVDILDDY---NSYSDHVPIIMTL 319 >gi|331265838|ref|YP_004325468.1| exodeoxyribonuclease III [Streptococcus oralis Uo5] gi|326682510|emb|CBZ00127.1| exodeoxyribonuclease III [Streptococcus oralis Uo5] Length = 275 Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 60/283 (21%), Positives = 98/283 (34%), Gaps = 31/283 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + +WN++S+ A + + + N DII +QETK K + L+ L Sbjct: 1 MKLISWNIDSLNAALTSDSARAKLSQEVLQTLVAENADIIAIQETKLSAKGPTKKHLEIL 60 Query: 54 -----NYHIETCGQKS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 Y + Y G L K + ++ Sbjct: 61 EELFQGYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAPSTMDLEGRIITLEFD 120 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 G+ + L+ E+P++ GDYN+ + D Sbjct: 121 TFFVTQVYTPNAGDGLKRLDERQVWDVKYAEY---LAELDKEKPVLATGDYNVAHKEIDL 177 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221 NP FT E R F L GFTD R H D Y++W + S N G Sbjct: 178 ANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHIHGDVPECYTWWAQRSKTSKINNTGW 237 Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 RID+ + S + + ID+ R DHTP+++ +++ Sbjct: 238 RIDYWLTSNRVADKVTKSDMIDSGARQ-----DHTPIVLEIEL 275 >gi|71902993|ref|YP_279796.1| exodeoxyribonuclease III [Streptococcus pyogenes MGAS6180] gi|71802088|gb|AAX71441.1| exodeoxyribonuclease III [Streptococcus pyogenes MGAS6180] Length = 303 Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats. Identities = 59/283 (20%), Positives = 101/283 (35%), Gaps = 31/283 (10%) Query: 4 VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + +WN++S+ A + + + + DII +QETK K + +++L Sbjct: 29 MKLISWNIDSLNAALTGESPRALLSRAVLDTLVAQDADIIAIQETKLSAKGPTKKHIETL 88 Query: 54 -NYHIETCGQKSYN---------GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 +Y + G L K ++T Sbjct: 89 LSYFPNYLHVWRSSVEPARKGYAGTMFLYKNTLNPVITFPEIGAPTTMDAEGRIITLEFE 148 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 G+ + L+ ++P++ GDYN+ + D Sbjct: 149 DFFVTQVYTPNAGDGLRRLDDRQIWDHKYADY---LTELDAQKPVLATGDYNVAHKEIDL 205 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221 NP FT E RQ F L GFTD R H D H+Y++W + S N G Sbjct: 206 ANPSSNRRSPGFTDEERQGFTNLLARGFTDTFRHLHGDIPHVYTWWAQRSKTSKINNTGW 265 Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 RID+ + S + + I + R DHTP+++ +D+ Sbjct: 266 RIDYWLASNRIVDKVKRSEMISSGERQ-----DHTPILLDIDL 303 >gi|325913687|ref|ZP_08176049.1| exodeoxyribonuclease III [Lactobacillus iners UPII 60-B] gi|325477046|gb|EGC80196.1| exodeoxyribonuclease III [Lactobacillus iners UPII 60-B] Length = 275 Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats. Identities = 63/282 (22%), Positives = 115/282 (40%), Gaps = 29/282 (10%) Query: 4 VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDK-------NFP 46 + +WN++S+ A + + IKE NPD++ +QETK + Sbjct: 1 MLFISWNIDSLNAALTGDSDRAHETRSVLNKIKEANPDVVAIQETKLRANGPTKKHCDIL 60 Query: 47 FETLQSLNYHIETCGQKSY--NGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 + + Y + + + + + P T+ Sbjct: 61 ADIFEDYQYVWRSSQEPARKSYAGTMFLYKKNYHPQVSYPLIGAPDTMDQEGRIITLEFN 120 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 + + +Y P+ D +I K + +L+ +P+I +GDYN+ Q D Sbjct: 121 SFYLTQVYTPNSGNELKRLADREIWDTK--YQEYLTKLDQNKPVIASGDYNVAHQEIDLK 178 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYY-ADSWSKNKGIR 222 +P ++A FT E R+ F KL ++GF D R + D +YS+W S + N G R Sbjct: 179 HPETNHHNAGFTDEERKGFSKLLSLGFIDTFRYINGDITDVYSWWSQRIRTSKTNNSGWR 238 Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 ID+ ++S + ++ IDT R DH P+++ +D+ Sbjct: 239 IDYYLVSQRLADKIEQSKMIDTGDRK-----DHCPILLKIDL 275 >gi|293365984|ref|ZP_06612686.1| exodeoxyribonuclease [Streptococcus oralis ATCC 35037] gi|291315527|gb|EFE55978.1| exodeoxyribonuclease [Streptococcus oralis ATCC 35037] Length = 275 Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats. Identities = 60/283 (21%), Positives = 101/283 (35%), Gaps = 31/283 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + +WN++S+ A + + + N DII +QETK K + L+ L Sbjct: 1 MKLISWNIDSLNAALTSDSARAKLSQEVLQTLVAENADIIAIQETKLSAKGPTKKHLEIL 60 Query: 54 -----NYHIETCGQKS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 Y + Y G L K + ++ Sbjct: 61 EELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAPSTMDLEGRIITLEFE 120 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 + G+ + + +L+ E+P++ GDYN+ + D Sbjct: 121 EFFVTQVYTPNAGDGLKRLEERQVWDVKYAEY---LAQLDKEKPVLATGDYNVAHKEIDL 177 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221 NP FT E R F L GFTD R H D Y++W + S N G Sbjct: 178 ANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHLHGDVPECYTWWAQRSKTSKINNTGW 237 Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 RID+ + S + + ID+ R DHTP+++ +++ Sbjct: 238 RIDYWLTSNRVADKVTKSDMIDSGARQ-----DHTPIVLEIEL 275 >gi|307710716|ref|ZP_07647145.1| exodeoxyribonuclease III [Streptococcus mitis SK321] gi|307617487|gb|EFN96658.1| exodeoxyribonuclease III [Streptococcus mitis SK321] Length = 275 Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats. Identities = 62/283 (21%), Positives = 99/283 (34%), Gaps = 31/283 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + +WN++S+ A + + + N DII +QETK K + L+ L Sbjct: 1 MKLISWNIDSLNAALTSDSARAKLSQEVLQTLVAENADIIAIQETKLSAKGPTKKHLEIL 60 Query: 54 -----NYHIETCGQKS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 Y + Y G L K + VT Sbjct: 61 EELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTVTFPEIGAPSTMDLEGRIITLEFD 120 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 + G+ + + L+ E+P++ GDYN+ D Sbjct: 121 KFFVTQVYTPNAGDGLKRLEERQVWDVKYAEY---LAELDKEKPVLATGDYNVAHNEIDL 177 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221 NP FT E R F L GFTD R H D Y++W + S N G Sbjct: 178 ANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHIHGDVPERYTWWAQRSKTSKINNTGW 237 Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 RID+ + S + + ID+ R DHTP+++ +++ Sbjct: 238 RIDYWLTSNRIADNVTKSDMIDSGARQ-----DHTPIVMEIEL 275 >gi|225857433|ref|YP_002738944.1| exodeoxyribonuclease III [Streptococcus pneumoniae P1031] gi|225724673|gb|ACO20525.1| exodeoxyribonuclease III [Streptococcus pneumoniae P1031] Length = 275 Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats. Identities = 58/282 (20%), Positives = 98/282 (34%), Gaps = 29/282 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDK-------NFP 46 + + +WN++S+ A + + + N DII +QETK K Sbjct: 1 MKLISWNIDSLNAALTSDSARAKLSQEVLQTLVAKNADIIAIQETKLSAKGPTKKHVEIL 60 Query: 47 FETLQSLN--YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 E + + + + + P T+ Sbjct: 61 EELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAPSTMDLEGRIITLEFD 120 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 + +Y P+ + ++ L+ E+P++ GDYN+ D Sbjct: 121 AFFVTQVYTPNAGDGLKRLEERQVWD--AKYAEYLAELDKEKPVLATGDYNVAHNEIDLA 178 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIR 222 NP FT E R F L GFTD R H D Y++W + S N G R Sbjct: 179 NPASNRRSPGFTDEERAGFTNLLATGFTDTFRHVHGDVPERYTWWAQRSKTSKINNTGWR 238 Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 ID+ + S + + ID+ R DHTP+++ +D+ Sbjct: 239 IDYWLTSNRIADKVTKSDMIDSGARQ-----DHTPIVLEIDL 275 >gi|126342732|ref|XP_001367276.1| PREDICTED: similar to APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Monodelphis domestica] Length = 482 Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 60/316 (18%), Positives = 101/316 (31%), Gaps = 43/316 (13%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNF--PFETLQSLN-YHIETC 60 + + +WN+N IR L + D+ CLQET+ P ++ + Y + Sbjct: 1 MRLVSWNINGIRRSPEALRHLLDSLGADVTCLQETRVTRDLLEEPLAIVEGYSSYFSFSR 60 Query: 61 GQKSYNGVAILSKYQPIE------------IVTHLPGDDLDVQA---------------- 92 + Y+GVA K G + + Sbjct: 61 CRSGYSGVATFCKNNATPGAAEEGLTSLLTTHQGAVGSYGNTEEFTEDELRSLDSEGRAV 120 Query: 93 --RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIF 150 + T +TL I N+Y PH +P + K+ + + A L+ +I Sbjct: 121 LTQHQIRTSDGQEKTLTIMNVYCPHADPEKPERLTYKLRFYRLLQLRAEALLQAGSHVII 180 Query: 151 AGDYNIIPQPHDCYNP----IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH-HLY 205 GD N +P D +P EN L + F D+ R H T + Sbjct: 181 LGDVNTSHRPLDHCDPADLECFEENPGRQWLTEFLWQPDRDSGLFVDSFRHFHPTTVGAF 240 Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEAT-SLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 + W + N G R+D+I+ + + + G SDH P+ +L Sbjct: 241 TCWSTATGARLTNYGTRLDYILGDRALVLEEFEDSFLMPEVEG----SDHCPIGATLRTE 296 Query: 265 EPRKKQQDSTSQNMKP 280 + P Sbjct: 297 LIPAPRCPPLCTRYLP 312 >gi|120586985|ref|NP_001073361.1| hypothetical protein LOC317628 [Rattus norvegicus] gi|119850781|gb|AAI27531.1| Similar to apurinic/apyrimidinic endonuclease 2 [Rattus norvegicus] gi|149031345|gb|EDL86343.1| rCG38932, isoform CRA_a [Rattus norvegicus] Length = 516 Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats. Identities = 60/335 (17%), Positives = 104/335 (31%), Gaps = 63/335 (18%) Query: 3 VVTVATWNVNSIRARIHNLA------------AWIKENNPDIICLQETKTEDKNF--PFE 48 ++ V +WN+N IR+ + LA + E + DI+CLQETK P Sbjct: 1 MLRVVSWNINGIRSPLQGLAGQEPSNSPTALRRVLDELDADIVCLQETKVTRDVLTEPLA 60 Query: 49 TLQSLNYHIETCGQKS-YNGVAILSKYQPIEI---------------VTHLPGDDLDVQA 92 ++ N + +S Y+GVA K + G+ + Sbjct: 61 IVEGYNSYFSFSRSRSGYSGVATFCKDSATPVAAEEGLSGVFATLNGDIGCYGNTDEFTQ 120 Query: 93 ---------------RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF 137 + T +TL + N+Y PH +P + K+ + + Sbjct: 121 EELRVLDSEGRAFLTQHKIRTLEGKEKTLTLINVYCPHADPGKPERLTFKMRFYRLLQIR 180 Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCY-----------NPIIWENDACFTLEVRQSFQKL 186 A L +I GD N +P D W + Sbjct: 181 AEALLAAGSHVIILGDLNTAHRPIDHCDASSLECFEEDPGRKWMDGLLSNPGNEAGPHIG 240 Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT-SLLHSARIDTKP 245 M ++ W + + N G R+D+++ ++ + + Sbjct: 241 HFMDSFRYF--HPKQQRAFTCWSVVSGARHLNYGSRLDYVLGDRSLVIDTFQASFLLPEV 298 Query: 246 RGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 G SDH PV L++ KQ + P Sbjct: 299 MG----SDHCPVGAVLNVSCVPAKQCPALCTRFLP 329 >gi|313885686|ref|ZP_07819435.1| exodeoxyribonuclease III [Eremococcus coleocola ACS-139-V-Col8] gi|312619051|gb|EFR30491.1| exodeoxyribonuclease III [Eremococcus coleocola ACS-139-V-Col8] Length = 275 Score = 129 bits (324), Expect = 4e-28, Method: Composition-based stats. Identities = 65/282 (23%), Positives = 109/282 (38%), Gaps = 29/282 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDK---NFPFETL 50 + + +WN++S+ A + ++ I NPDII +QETK K E L Sbjct: 1 MKLISWNIDSLNAALTSDSNRALLSRDVLQTILNLNPDIIAIQETKLSAKGPTQKHLEIL 60 Query: 51 QSL--NYHIETCGQKSY----NGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 L +Y + + + +E P + T+ Sbjct: 61 ADLFKDYMVVWRSSEEPARKGYAGTMFLYKHDLEPKVTFPEIEAPSPMDAEGRMITLEFD 120 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 + +Y P+ D +I + L+ ++ ++ GD+N+ D Sbjct: 121 DFYVTQVYTPNAGNALKRLADRQIWDQQ--YAAYLASLDQDKIVLATGDFNVAHHEIDLA 178 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIR 222 +P + A FT E R F +L GFTD R H D Y++W S N G R Sbjct: 179 HPENNHHSAGFTDEERAGFTQLLAHGFTDTFRHLHGDVTGAYTWWAQRVKTSKINNSGWR 238 Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 ID+ ++S A + + ID+ R DHTP+++ +DI Sbjct: 239 IDYWLVSNRAVDRVIQSEIIDSGTRQ-----DHTPILLEIDI 275 >gi|94993733|ref|YP_601831.1| Exodeoxyribonuclease III [Streptococcus pyogenes MGAS10750] gi|94547241|gb|ABF37287.1| Exodeoxyribonuclease III [Streptococcus pyogenes MGAS10750] Length = 303 Score = 129 bits (324), Expect = 4e-28, Method: Composition-based stats. Identities = 59/283 (20%), Positives = 101/283 (35%), Gaps = 31/283 (10%) Query: 4 VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + +WN++S+ A + + + + DII +QETK K + +++L Sbjct: 29 MKLISWNIDSLNAALTGESPRALLSRAVLDTLVAQDADIIAIQETKLSAKGPTKKHIETL 88 Query: 54 -NYHIETCGQKSYN---------GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 +Y + G L K ++T Sbjct: 89 LSYFPNYLHVWRSSVEPARKGYAGTMFLYKNTLNPVITFPEIGAPTTMDAEGRIITLEFE 148 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 G+ + L+ ++P++ GDYN+ + D Sbjct: 149 DFFVTQVYTPNAGDGLRRLDDRQIWDHKYADY---LTELDTQKPVLATGDYNVAHKEIDL 205 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221 NP FT E RQ F L GFTD R H D H+Y++W + S N G Sbjct: 206 ANPSSNRRSPGFTDEERQGFTNLLARGFTDTFRHLHGDIPHVYTWWAQRSKTSKINNTGW 265 Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 RID+ + S + + I + R DHTP+++ +D+ Sbjct: 266 RIDYWLASNRIVDKIKRSEMISSGERQ-----DHTPILLDIDL 303 >gi|139474328|ref|YP_001129044.1| exodeoxyribonuclease [Streptococcus pyogenes str. Manfredo] gi|134272575|emb|CAM30841.1| exodeoxyribonuclease [Streptococcus pyogenes str. Manfredo] Length = 275 Score = 129 bits (324), Expect = 4e-28, Method: Composition-based stats. Identities = 59/282 (20%), Positives = 100/282 (35%), Gaps = 31/282 (10%) Query: 4 VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + +WN++S+ A + + + + DII +QETK K + +++L Sbjct: 1 MKLISWNIDSLNAALTGESPRALLSRAVLDTLVAQDADIIAIQETKLSAKGPTKKHIEAL 60 Query: 54 -NYHIETCGQKSYN---------GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 +Y + G L K ++T Sbjct: 61 LSYFPNYLHVWRSSVEPARKGYAGTMFLYKNTLNPVITFPEIGAPTTMDAEGRIITLEFE 120 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 G+ + L+ ++P++ GDYN+ + D Sbjct: 121 DFFVTQVYTPNAGDGLRRLDDRQIWDHKYADY---LTELDAQKPVLATGDYNVAHKEIDL 177 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221 NP FT E RQ F L GFTD R H D H+Y++W + S N G Sbjct: 178 ANPSSNRRSPGFTDEERQGFTNLLARGFTDTFRHLHGDIPHVYTWWAQRSKTSKINNTGW 237 Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLD 262 RID+ + S + + I + R DHTP+++ +D Sbjct: 238 RIDYWLASNRLVDKVKRSEMISSGERQ-----DHTPILLDID 274 >gi|123385824|ref|XP_001299171.1| exodeoxyribonuclease III family protein [Trichomonas vaginalis G3] gi|121879954|gb|EAX86241.1| exodeoxyribonuclease III family protein [Trichomonas vaginalis G3] Length = 467 Score = 129 bits (324), Expect = 4e-28, Method: Composition-based stats. Identities = 63/263 (23%), Positives = 108/263 (41%), Gaps = 16/263 (6%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTED---KNFPFETLQSLNYHIET 59 + ++T N S+RA L W + PD+IC+QETK + N L + Sbjct: 12 LKISTINAASLRAAWGKGLHDWALASKPDVICIQETKMHETSQPNIGAFLLDGYQGYFFD 71 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 C + ++G AI +K +PI + P D+ T+ + N Y+P+ Sbjct: 72 CNKPGFHGTAIYTKIKPISVKESFPDDEGRS--------ITMEFSNFYLINSYVPNAGQK 123 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 KI L+ L + +I+ GD N+ + D ++P + A +T + Sbjct: 124 LEK-LTYKIETWNPHLKEYLDELSKTKAVIWTGDLNVAHEEIDIFDPKGKDKTAGYTPQE 182 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R+ F K G+TD R + +SF+ Y + +K G R+D+ ++ Sbjct: 183 REWFHKFLESGYTDIFRKRYPDKKEFSFYTYRGQAKAKGNGWRLDYFIMDNA---HYKDE 239 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 ++ SDH PV + LD Sbjct: 240 LVNDCAMETGDFSDHVPVSLFLD 262 >gi|327490155|gb|EGF21943.1| exodeoxyribonuclease [Streptococcus sanguinis SK1058] Length = 322 Score = 129 bits (324), Expect = 4e-28, Method: Composition-based stats. Identities = 61/283 (21%), Positives = 100/283 (35%), Gaps = 31/283 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + +WN++S+ A + + ++ N DII +QETK + L+ L Sbjct: 48 MKLISWNIDSLNAALTSDSARAQLSQAVLQTLQAENADIIAIQETKLSATGPTKKHLEIL 107 Query: 54 NYHIETCGQ----------KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 Y K Y G L K + VT Sbjct: 108 TYLFPDYENTWRSSREPARKGYAGTMFLYKKELTPTVTFPEIGAPSTMDVEGRIITLEFD 167 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 G+ + + L+ ++P++ GDYN+ + D Sbjct: 168 GFFVTQVYTPNAGDGLKRLN---ERQVWDAKYAEYLASLDEQKPVLATGDYNVAHKEIDL 224 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221 NP FT E R F L GFTD R H D + Y++W + S N G Sbjct: 225 ANPASNRRSPGFTDEERAGFTNLLAKGFTDTFRHLHGDIPNQYTWWAQRSKTSKINNTGW 284 Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 RID+ + S + + ID+ R DHTP+++ +++ Sbjct: 285 RIDYWLTSNRVADKVTKSDMIDSGARQ-----DHTPIVMEIEL 322 >gi|167555152|ref|NP_001107928.1| hypothetical protein LOC797209 [Danio rerio] gi|160773435|gb|AAI55114.1| LOC797209 protein [Danio rerio] Length = 558 Score = 129 bits (323), Expect = 5e-28, Method: Composition-based stats. Identities = 56/333 (16%), Positives = 95/333 (28%), Gaps = 59/333 (17%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + TWN+N IR + + + + DIIC+QETK +T Y+ + Sbjct: 1 MKIVTWNINGIRTFKNGIKKILDSFDADIICVQETKVTRDLLDEKTAIVDGYNSYFSFSR 60 Query: 64 SYNG---------------------VAILSKYQPIEIVTHLP-----------GDDLDVQ 91 +G +LS + ++ Sbjct: 61 GRSGYSGVATYCKDTATPFLAEEGLTGLLSNQGEVIGCYGDQVELTSEEFLALDNEGRAV 120 Query: 92 ARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFA 151 Q L + N+Y P +P + + K+ + + A L +I Sbjct: 121 ISQHHFIGQDGPQKLTVINVYCPRADPDKPERKEFKLQFYRLLQCRAEAILSSGSHVIIL 180 Query: 152 GDYNIIPQPHDCYNPI--IWENDACFTLEVRQSFQKLQN--------------------- 188 GD N +P D +P D + Q + Sbjct: 181 GDVNTSHRPIDHCDPDDVDNFEDNPGRKWLDQFLFETAENSENGNAADEPAEDFQESASG 240 Query: 189 MGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRG 247 F D+ R H + + W + N G RID+I + + + I Sbjct: 241 GKFVDSFRYFHPKRSNALTCWSTLTGARQTNYGTRIDYIFSNHSL---VKTFFIGVDIMP 297 Query: 248 WTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 + SDH PV L + P Sbjct: 298 EVEGSDHCPVWAQLSCTLQSSPRCPPVCTRHMP 330 >gi|115913980|ref|XP_784420.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115941123|ref|XP_001188757.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 596 Score = 129 bits (323), Expect = 5e-28, Method: Composition-based stats. Identities = 55/344 (15%), Positives = 92/344 (26%), Gaps = 90/344 (26%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V TWN+N +RA L + DIICLQETK + + +Y+ K Sbjct: 1 MKVLTWNINGLRACKVPLKELFANLDADIICLQETKITRDQLDNDLVNVDDYNAYFSFSK 60 Query: 64 SYNGVAILSKYQPIEIV--------------------THLPGDDLDVQA----------- 92 +G + ++ Y GD Sbjct: 61 KRSGYSGVATYCKNSTTPVIAEEGLTGLLSHGTKQSLIGCYGDQSAYSPEELLSIDAEGR 120 Query: 93 ----RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPL 148 + L I N+Y P + K+ + A L+ + + Sbjct: 121 TIITQHQYRKKDGALGDLVIINVYCPRAGDDNPERKSFKMRFYNLLQLRAEAMLQAGKSV 180 Query: 149 IFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDA-------------- 194 + GD N + D +P + L++ + Sbjct: 181 VIVGDVNASHRRIDHCDPSGNWGKFESHPSRKWLDGFLKDCSCPETAETSPSSQDDLQKS 240 Query: 195 -----------------------------------IRATHD-THHLYSFWDYYADSWSKN 218 R H + ++ W + N Sbjct: 241 PQEEQELSDEERHVHDDSNIDVEDIPSKDNLFVDSFRYFHPKRENAFTCWSTLTGARQTN 300 Query: 219 KGIRIDHIMLSPEA-TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 G RID+I+++ L I + G SDH PV +L Sbjct: 301 YGTRIDYIIVNERLCVDELTECDIMPEFEG----SDHCPVKATL 340 >gi|307709700|ref|ZP_07646152.1| exodeoxyribonuclease III [Streptococcus mitis SK564] gi|307619598|gb|EFN98722.1| exodeoxyribonuclease III [Streptococcus mitis SK564] Length = 275 Score = 129 bits (323), Expect = 5e-28, Method: Composition-based stats. Identities = 61/283 (21%), Positives = 100/283 (35%), Gaps = 31/283 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + +WN++S+ A + + + N DII +QETK K + L+ L Sbjct: 1 MKLISWNIDSLNAALTSDSARAKLSQEVLQTLVAENADIIAIQETKLSAKGPTKKHLEIL 60 Query: 54 -----NYHIETCGQKS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 NY + Y G L K + ++ Sbjct: 61 AELFPNYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAPSTMDLEGRIITLEFD 120 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 + G+ + + L+ E+P++ GDYN+ D Sbjct: 121 KFFVTQVYTPNAGDGLKRLEERQIWDVKYAEY---LAELDKEKPVLATGDYNVAHNEIDL 177 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221 NP FT E R F L GFTD R H D Y++W + S N G Sbjct: 178 ANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHIHGDVPERYTWWAQRSKTSKINNTGW 237 Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 RID+ + S + + ID+ R DHTP+++ +++ Sbjct: 238 RIDYWLTSNRIADKVTKSDMIDSGARQ-----DHTPIVLEIEL 275 >gi|322392394|ref|ZP_08065855.1| exodeoxyribonuclease [Streptococcus peroris ATCC 700780] gi|321144929|gb|EFX40329.1| exodeoxyribonuclease [Streptococcus peroris ATCC 700780] Length = 275 Score = 129 bits (323), Expect = 5e-28, Method: Composition-based stats. Identities = 59/283 (20%), Positives = 100/283 (35%), Gaps = 31/283 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTE---DKNFPFETL 50 + + +WN++S+ A + ++ + + DII +QETK E L Sbjct: 1 MKLISWNIDSLNAALTSDSARAKLSQDVLQTLVAEDADIIAIQETKLSATGPTKKHLEVL 60 Query: 51 QSL--NYHIETCGQKS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 + L Y + Y G L K + ++ Sbjct: 61 EELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAPSTMDSEGRIITLEFD 120 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 G+ + + L+ ++P++ GDYN+ + D Sbjct: 121 TFFVTQVYTPNAGDGLKRLEERQVWDIKYAEY---LAELDKKKPVLATGDYNVAHKEIDL 177 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221 NP FT E R+ F L GFTD R H D Y++W + S N G Sbjct: 178 ANPASNHRSPGFTDEEREGFTNLLAKGFTDTFRHVHGDVPERYTWWAQRSKTSKINNTGW 237 Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 RID+ + S + + ID+ PR DHTP+++ + + Sbjct: 238 RIDYWLTSNRVADKVTKSDMIDSGPRQ-----DHTPIVLEIKL 275 >gi|3036809|emb|CAA18499.1| putative protein [Arabidopsis thaliana] gi|7270557|emb|CAB81514.1| putative protein [Arabidopsis thaliana] Length = 641 Score = 129 bits (323), Expect = 5e-28, Method: Composition-based stats. Identities = 43/325 (13%), Positives = 80/325 (24%), Gaps = 47/325 (14%) Query: 4 VTVATWNVNSIRARIHNL---AAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 + + T+NVN +R R+ + + DIIC QETK + + + Y Sbjct: 1 MKIVTYNVNGLRQRVSQFDSLLKLLDSFDADIICFQETKLRRQELTADLAIADGYESFFS 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 ++ + Sbjct: 61 CTRTSEKGRTGYSGVATFCRVKSASSSCETALPVTAEEGITGLVNSNSRGGKSETSTVAE 120 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIF-----------AGDYNIIPQPHD--CYNPI 167 + +K + + ++F A + + Sbjct: 121 GLEEYEKEELLMIDQEGRCVITDHGHFVVFNVYGPRAVADDADRIEFKHRFYGVLERRWE 180 Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHI 226 V M +A ++ W + + N G RIDHI Sbjct: 181 CLLRQGRRVFVVGDLNIAPFAMDRCEAGPDFEKNEKDAFTCWSSSSGAEQFNYGSRIDHI 240 Query: 227 MLSPE-------------ATSLLHSARIDTK---------PRGWT-------KPSDHTPV 257 +++ + I T+ P W K SDH PV Sbjct: 241 LVAGSCLHQDEDKQGHSFLACHVKECDILTEYKRFKNENMPTRWKGGLVTKFKGSDHVPV 300 Query: 258 IVSL-DIPEPRKKQQDSTSQNMKPI 281 +S D+P+ + + P+ Sbjct: 301 FISFDDLPDIPEHSTPPLASRYLPM 325 >gi|322377529|ref|ZP_08052020.1| exodeoxyribonuclease III [Streptococcus sp. M334] gi|321281729|gb|EFX58738.1| exodeoxyribonuclease III [Streptococcus sp. M334] Length = 275 Score = 129 bits (323), Expect = 5e-28, Method: Composition-based stats. Identities = 60/283 (21%), Positives = 98/283 (34%), Gaps = 31/283 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDK-------NFP 46 + + +WN++S+ A + + + N DII +QETK K Sbjct: 1 MKLISWNIDSLNAALTSDSARAKLSQEVLQTLVAENADIIAIQETKLSAKGPTKKHLEIL 60 Query: 47 FETLQSLNYHIETCGQKS---YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 E + + + Y G L K + VT Sbjct: 61 EELFPDYENTWRSSQEPARKGYAGTMFLYKKELTPTVTFPEIGAPSTMDLEGRIITLEFD 120 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 + G+ + + +L+ E+P++ GDYN+ D Sbjct: 121 EFFVTQVYTPNAGDGLKRLEERQVWDVKYAEY---LAQLDKEKPVLATGDYNVAHNEIDL 177 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221 NP FT E R F L GFTD R H D Y++W + S N G Sbjct: 178 ANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHIHGDVPERYTWWAQRSKTSKINNTGW 237 Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 RID+ + S + + ID+ R DHTP+++ +++ Sbjct: 238 RIDYWLTSNRIADKVTKSDMIDSGARQ-----DHTPIVMEIEL 275 >gi|12862077|dbj|BAB32346.1| unnamed protein product [Mus musculus] Length = 385 Score = 129 bits (323), Expect = 6e-28, Method: Composition-based stats. Identities = 60/335 (17%), Positives = 105/335 (31%), Gaps = 63/335 (18%) Query: 3 VVTVATWNVNSIRARIHNLA------------AWIKENNPDIICLQETKTEDKNF--PFE 48 ++ V +WN+N IR+ + LA + E + DI+CLQETK P Sbjct: 1 MLRVVSWNINGIRSPLQGLACQEPSSCPTALRRVLDELDADIVCLQETKVTRDVLTEPLA 60 Query: 49 TLQSLNYHIETCGQKS-YNGVAILSKYQPIEI---------------VTHLPGDDLDVQA 92 ++ N + +S Y+GVA K + G+ + Sbjct: 61 IVEGYNSYFSFSRSRSGYSGVATFCKDSATPVAAEEGLSGVFATLNGDIGCYGNMDEFTQ 120 Query: 93 ---------------RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF 137 + T +TL + N+Y PH +P + K+ + + Sbjct: 121 EELRVLDSEGRALLTQHKIRTLEGKEKTLTLINVYCPHADPXKPERLTFKMRFYRLLQMR 180 Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCY-----------NPIIWENDACFTLEVRQSFQKL 186 A L +I GD N +P D W + Sbjct: 181 AEPLLAAGSHVIILGDLNTAHRPIDHCDASSLECFEXDPGRKWMDGLLSNPGDEAGPHIG 240 Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT-SLLHSARIDTKP 245 M + ++ W + + N G R+D+++ ++ + + Sbjct: 241 LFMDSYRYL--HPKQQRAFTCWSVVSGARHLNYGSRLDYVLGDRALVIDTFQASFLLPEV 298 Query: 246 RGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 G SDH PV L++ KQ + P Sbjct: 299 MG----SDHCPVGAVLNVSCVPAKQCPALCTRFLP 329 >gi|308162466|gb|EFO64862.1| Endonuclease/Exonuclease/phosphatase [Giardia lamblia P15] Length = 322 Score = 129 bits (323), Expect = 6e-28, Method: Composition-based stats. Identities = 57/283 (20%), Positives = 106/283 (37%), Gaps = 29/283 (10%) Query: 5 TVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL---------- 53 T+ NVN IR+ L +I +PDI+C ETK F + Sbjct: 40 TILAINVNGIRSAFSKGLKDFIYRKDPDIVCFSETKLGSSAFAAFMEKEATVDPDTGVYT 99 Query: 54 ---NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIG 109 Y C + G A + + + + E F ++ + + Sbjct: 100 VIKGYKHVFCCSTAKQGYASTAMFVKESVPVLNLCMQMGEPEFDSEGRFLHVSLPSFELI 159 Query: 110 NLYLPHGNP----------ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159 ++Y+P+ +I++ K ++ + + +++ GD N+ Sbjct: 160 HVYVPNSGRGSNGKTFTSKNKPANLPTRINYEKLISKYIGNLVAAGKDVVYCGDLNVAHN 219 Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMG-FTDAIRATHDTHHLYSFWDYYADSWSKN 218 D YNP + FT E R +F KL + DA RA H YS++ + + + Sbjct: 220 EIDLYNPKGNHFNPGFTDEERNAFSKLLDGHGLIDAFRAMHPHRVKYSWFSNFGRAREQK 279 Query: 219 KGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 G RID+ +++ + + + + SDH P+I++L Sbjct: 280 HGWRIDYFVVTHQIFRRVTTVDVLDD---HNSYSDHVPIIMTL 319 >gi|312863077|ref|ZP_07723315.1| exodeoxyribonuclease III [Streptococcus vestibularis F0396] gi|322516276|ref|ZP_08069206.1| exodeoxyribonuclease [Streptococcus vestibularis ATCC 49124] gi|311100613|gb|EFQ58818.1| exodeoxyribonuclease III [Streptococcus vestibularis F0396] gi|322125249|gb|EFX96622.1| exodeoxyribonuclease [Streptococcus vestibularis ATCC 49124] Length = 275 Score = 129 bits (323), Expect = 6e-28, Method: Composition-based stats. Identities = 55/282 (19%), Positives = 101/282 (35%), Gaps = 29/282 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDK-------NFP 46 + + +WN++S+ A + + + N DII +QETK K Sbjct: 1 MKLISWNIDSLNAALTSDSARAQLSRAVIDTLVAENADIIAIQETKLSAKGPTKKHLQIL 60 Query: 47 FETLQSL--NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 + + + + + + + P T+ Sbjct: 61 EDYFPDYVNTWRSSVEPARKGYAGTMFLYKKELTPIITYPEIGAPSTMDCEGRIITLEFA 120 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 + +Y P+ + +I +L+ ++P++ GDYN+ + D Sbjct: 121 NFFVTQVYTPNAGDGLKRLLERQIWD--EKYADYLAKLDAQKPVLATGDYNVAHKEIDLA 178 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIR 222 NP FT E R F L GFTD R + D Y++W + S N G R Sbjct: 179 NPSSNRRSPGFTDEERAGFTNLLAKGFTDTYRHLNGDVTGAYTWWAQRSKTSKINNTGWR 238 Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 ID+ + S + + I++ R DHTP+++ +D+ Sbjct: 239 IDYWLTSNRIADKVTKSDMINSGDRQ-----DHTPIVLEIDL 275 >gi|306827920|ref|ZP_07461187.1| exodeoxyribonuclease III [Streptococcus pyogenes ATCC 10782] gi|304429839|gb|EFM32881.1| exodeoxyribonuclease III [Streptococcus pyogenes ATCC 10782] Length = 275 Score = 129 bits (323), Expect = 6e-28, Method: Composition-based stats. Identities = 59/283 (20%), Positives = 101/283 (35%), Gaps = 31/283 (10%) Query: 4 VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + +WN++S+ A + + + + DII +QETK K + +++L Sbjct: 1 MKLISWNIDSLNAALTGESPRALLSRAVLDTLVAQDADIIAIQETKLSAKGPTKKHIETL 60 Query: 54 -NYHIETCGQKSYN---------GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 +Y + G L K ++T Sbjct: 61 LSYFPNYLHVWRSSVEPARKGYAGTMFLYKSTLNPVITFPEIGAPTTMDAEGRIITLEFE 120 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 G+ + L+ ++P++ GDYN+ + D Sbjct: 121 DFFVTQVYTPNAGDGLRRLDDRQIWDHKYADY---LTELDTQKPVLATGDYNVAHKEIDL 177 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221 NP FT E RQ F L GFTD R H D H+Y++W + S N G Sbjct: 178 ANPSSNRRSPGFTDEERQGFTNLLARGFTDTFRHLHGDIPHVYTWWAQRSKTSKINNTGW 237 Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 RID+ + S + + I + R DHTP+++ +D+ Sbjct: 238 RIDYWLASNRIVDKVKRSEMISSGERQ-----DHTPILLDIDL 275 >gi|329116616|ref|ZP_08245333.1| exodeoxyribonuclease III [Streptococcus parauberis NCFD 2020] gi|326907021|gb|EGE53935.1| exodeoxyribonuclease III [Streptococcus parauberis NCFD 2020] Length = 275 Score = 128 bits (322), Expect = 6e-28, Method: Composition-based stats. Identities = 60/283 (21%), Positives = 101/283 (35%), Gaps = 31/283 (10%) Query: 4 VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + +WN++S+ A + + + + DII +QETK + ++S+ Sbjct: 1 MKLISWNIDSLNAALTGESPRALLSRAVIDTLVAQDADIIAIQETKLSATGPTKKHIESI 60 Query: 54 N-YHIETCGQKSYN---------GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 Y E + G L K IVT Sbjct: 61 ESYFPEYVHVWRSSVEPARKGYAGTMFLYKKSLNPIVTFPEIGAPTTMDAEGRIITLEFD 120 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 G+ + +L+ ++P++ GDYN+ D Sbjct: 121 DCFVTQVYTPNAGDGLKRLTDRQLWDIKYAEY---LAQLDAQKPVLATGDYNVAHNEIDL 177 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221 NP A FT E R F L GFTD R H D ++Y++W + S N G Sbjct: 178 ANPASNRRSAGFTDEERAGFTMLLGHGFTDTFRHIHGDIPNVYTWWAQRSKTSKINNTGW 237 Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 RID+ + S + + I++ R DHTP+++ +D+ Sbjct: 238 RIDYWLTSNRVADKVLKSEMINSGARQ-----DHTPILLEIDL 275 >gi|306834074|ref|ZP_07467194.1| exodeoxyribonuclease III [Streptococcus bovis ATCC 700338] gi|304423647|gb|EFM26793.1| exodeoxyribonuclease III [Streptococcus bovis ATCC 700338] Length = 275 Score = 128 bits (322), Expect = 7e-28, Method: Composition-based stats. Identities = 57/282 (20%), Positives = 98/282 (34%), Gaps = 29/282 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDK-------NFP 46 + + +WN++S+ A + + + N DII +QETK K Sbjct: 1 MKLISWNIDSLNAALTSDSARAVMSRAVIDTLVTENADIIAIQETKLSAKGPTKKHLQIL 60 Query: 47 FETLQSLN--YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 + + + + + P T+ Sbjct: 61 QDYFPEYEVSWRSSVEPARKGYAGTMFLYKSSLTPSISYPEIGAPDTMDSEGRIITLEFD 120 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 + +Y P+ + +I L+ +P++ GDYN+ + D Sbjct: 121 KFFVTQVYTPNAGDGLKRLAERQIWD--EKYADYLTELDQVKPVLATGDYNVAHKEIDLA 178 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIR 222 +P FT E R F L GFTD R H D +YS+W + S N G R Sbjct: 179 HPSSNRRSPGFTDEERAGFTNLLAKGFTDTFRYIHGDIPDVYSWWAQRSKTSKINNSGWR 238 Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 ID+ + S + + ID+ R DHTP+++ +D+ Sbjct: 239 IDYWLTSSRIADKITKSEMIDSGARQ-----DHTPIVLEIDL 275 >gi|257066091|ref|YP_003152347.1| exodeoxyribonuclease III Xth [Anaerococcus prevotii DSM 20548] gi|256797971|gb|ACV28626.1| exodeoxyribonuclease III Xth [Anaerococcus prevotii DSM 20548] Length = 274 Score = 128 bits (322), Expect = 7e-28, Method: Composition-based stats. Identities = 58/282 (20%), Positives = 102/282 (36%), Gaps = 31/282 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTED--------KNF 45 + +WN++S+ A + ++ IK NPD+I LQETK + Sbjct: 1 MKFISWNIDSLNAALTSDSKRAVMSRDVLLTIKNENPDVIALQETKLPANGPSKKHVEKL 60 Query: 46 PFETLQSLNYHIETCGQ--KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 E +Y + + + + +++ P T+ Sbjct: 61 -SEFFPDYDYVWISSRPGARKSYAGTMTLYKKGLDVKESFPEIGAPDTMDLEGRILTLEF 119 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 + +Y P+ + L+ +P+I GD+N+ + D Sbjct: 120 EDFYFTQVYTPNAGGELKRL--PLREEWDKLYADYLAELDKNKPVIATGDFNVAHEEIDL 177 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYAD-SWSKNKGI 221 +P A FT E R+ F L N GFTD R + Y++W S N G Sbjct: 178 AHPENNHMSAGFTDEERRGFTNLLNRGFTDTFRHLNKNLEGAYTWWAQRVKTSKINNSGW 237 Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLD 262 RID+ ++S + + ID+ R DHTP+++ + Sbjct: 238 RIDYFLVSDRLMEDVIDSTIIDSGDRQ-----DHTPIMLEIK 274 >gi|315613690|ref|ZP_07888597.1| exodeoxyribonuclease III [Streptococcus sanguinis ATCC 49296] gi|315314381|gb|EFU62426.1| exodeoxyribonuclease III [Streptococcus sanguinis ATCC 49296] Length = 296 Score = 128 bits (322), Expect = 7e-28, Method: Composition-based stats. Identities = 60/283 (21%), Positives = 100/283 (35%), Gaps = 31/283 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + +WN++S+ A + + + N DII +QETK K + L+ L Sbjct: 22 MKLISWNIDSLNAALTSDSARAKLSQEVLQTLVAENADIIAIQETKLSAKGPTKKHLEIL 81 Query: 54 -----NYHIETCGQKS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 Y + Y G L K + ++ Sbjct: 82 EELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAPSTMDLEGRIITLEFD 141 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 G+ + + +L+ E+P++ GDYN+ + D Sbjct: 142 TFFVTQVYTPNAGDGLKRLEERQVWDVKYAEY---LAQLDKEKPVLATGDYNVAHKEIDL 198 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221 NP FT E R F L GFTD R H D Y++W + S N G Sbjct: 199 ANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHIHGDVPERYTWWAQRSKTSKINNTGW 258 Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 RID+ + S + + ID+ R DHTP+++ +++ Sbjct: 259 RIDYWLTSNRVAEKVTKSDMIDSGARQ-----DHTPIVLEIEL 296 >gi|28896473|ref|NP_802823.1| 3'-exo-deoxyribonuclease [Streptococcus pyogenes SSI-1] gi|28811724|dbj|BAC64656.1| putative 3'-exo-deoxyribonuclease [Streptococcus pyogenes SSI-1] Length = 313 Score = 128 bits (322), Expect = 7e-28, Method: Composition-based stats. Identities = 59/283 (20%), Positives = 101/283 (35%), Gaps = 31/283 (10%) Query: 4 VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + +WN++S+ A + + + + DII +QETK K + +++L Sbjct: 39 MKLISWNIDSLNAALTGESPRALLSRAVLDTLVAQDADIIAIQETKLSAKGPTKKHIEAL 98 Query: 54 -NYHIETCGQKSYN---------GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 +Y + G L K ++T Sbjct: 99 LSYFPNYLHVWRSSVEPARKGYAGTMFLYKNTLNPVITFPEIGAPTTMDAEGRIITLEFE 158 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 G+ + L+ ++P++ GDYN+ + D Sbjct: 159 DFFVTQVYTPNAGDGLRRLDDRQIWDHKYADY---LTELDAQKPVLATGDYNVAHKEIDL 215 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221 NP FT E RQ F L GFTD R H D H+Y++W + S N G Sbjct: 216 ANPSSNRRSPGFTDEERQGFTNLLARGFTDTFRHVHGDIPHVYTWWAQRSKTSKINNTGW 275 Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 RID+ + S + + I + R DHTP+++ +D+ Sbjct: 276 RIDYWLASNRIVDKVKRSEMISSGERQ-----DHTPILLDIDL 313 >gi|316977461|gb|EFV60557.1| DNA-(apurinic or apyrimidinic site) lyase 2 [Trichinella spiralis] Length = 462 Score = 128 bits (322), Expect = 8e-28, Method: Composition-based stats. Identities = 49/292 (16%), Positives = 97/292 (33%), Gaps = 39/292 (13%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + TWNVN +R+ + + + DIICLQETK + + Sbjct: 1 MKITTWNVNGLRSIVD-IQKTLLSLGCDIICLQETKLTYDTLDSSLALIDGFDSYFAFCQ 59 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ------------------- 104 + G + ++ Y + L ++ R + Sbjct: 60 TRRGYSGVATYCKSDFSPDLVFNNFHDLYRQFQFAHPNRQHLGIFDNFDTLDNEGRMLAT 119 Query: 105 -----------TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGD 153 L I N+Y P +P + + +++++K L ++ GD Sbjct: 120 RHKLTNCNNAEYLFILNIYCPRVDPEQMDRQNFRLAFLKLLQHCTECLLNSGNYVLILGD 179 Query: 154 YNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQ---NMGFTDAIRATHDTHHL-YSFWD 209 N+ + D +P + + + + + D R + ++ W+ Sbjct: 180 MNLCHKRIDHCDPDQEFDTDEARIWLCEFLYDTDKNADGKMVDLYRIHYPNKGRMFTCWN 239 Query: 210 YYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + N G RID+I+ + + I + +G SDH PV+ L Sbjct: 240 SQKRARILNFGTRIDYILANVDLIDRCSCCEILSSIQG----SDHCPVMAEL 287 >gi|288905926|ref|YP_003431148.1| 3'-exo-deoxyribonuclease [Streptococcus gallolyticus UCN34] gi|306831945|ref|ZP_07465100.1| exodeoxyribonuclease III [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325978892|ref|YP_004288608.1| exodeoxyribonuclease III [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288732652|emb|CBI14224.1| putative 3'-exo-deoxyribonuclease [Streptococcus gallolyticus UCN34] gi|304425871|gb|EFM28988.1| exodeoxyribonuclease III [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325178820|emb|CBZ48864.1| exodeoxyribonuclease III [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 275 Score = 128 bits (322), Expect = 8e-28, Method: Composition-based stats. Identities = 57/282 (20%), Positives = 98/282 (34%), Gaps = 29/282 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDK-------NFP 46 + + +WN++S+ A + + + N DII +QETK K Sbjct: 1 MKLISWNIDSLNAALTSDSARAVMSRAVIDTLVTENADIIAIQETKLSAKGPTKKHLQIL 60 Query: 47 FETLQSLN--YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 + + + + + P T+ Sbjct: 61 QDYFPEYEVSWRSSVEPARKGYAGTMFLYKSSLTPSISYPEIGAPDTMDSEGRIITLEFD 120 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 + +Y P+ + +I L+ +P++ GDYN+ + D Sbjct: 121 KFFVTQVYTPNAGDGLKRLAERQIWD--EKYADYLAELDQVKPVLATGDYNVAHKEIDLA 178 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIR 222 +P FT E R F L GFTD R H D +YS+W + S N G R Sbjct: 179 HPSSNRRSPGFTDEERAGFTNLLAKGFTDTFRYIHGDIPDVYSWWAQRSKTSKINNSGWR 238 Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 ID+ + S + + ID+ R DHTP+++ +D+ Sbjct: 239 IDYWLTSSRIADKITKSEMIDSGARQ-----DHTPIVLEIDL 275 >gi|330719278|ref|ZP_08313878.1| exonuclease III [Leuconostoc fallax KCTC 3537] Length = 271 Score = 128 bits (322), Expect = 8e-28, Method: Composition-based stats. Identities = 70/278 (25%), Positives = 114/278 (41%), Gaps = 26/278 (9%) Query: 4 VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + +WN++SI A + + + I E PD++ +QETK + + L +L Sbjct: 1 MKFISWNIDSINAAVEHKSNRGEMTWAVLNEISEIAPDVLSIQETKLKASGLTKKQLATL 60 Query: 54 N-----YHIETCGQKSYNGVAILSKYQPI-EIVTHLPGDDLDVQARFIEATFTINTQTLR 107 N YHI +G + + + +P D + T+ Sbjct: 61 NSLFPDYHIFVNPSTGRSGYSGTMMLSKVAPLNIDMPKIDAPGEMDLEGRIITLEFPEFY 120 Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167 + +Y P+ + D R Q L+ ++P+IF+GD+N+ Q D NP Sbjct: 121 VSTVYTPNSGSQLARLNDRG--AWDDAYRHYIQSLDQQKPVIFSGDFNVAHQEIDLKNPK 178 Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYAD-SWSKNKGIRIDH 225 + A FT E R+ F L + GFTD R T Y++W + S N G RID+ Sbjct: 179 SNRHSAGFTPEEREKFTNLLDSGFTDTFRYFEPTLTGAYTWWAQISKTSKINNSGWRIDY 238 Query: 226 IMLSPEATSLLHSARI-DTKPRGWTKPSDHTPVIVSLD 262 + S L + I DT R DH P+++ +D Sbjct: 239 YLTSERLNERLKAHHILDTGARQ-----DHAPIMLEID 271 >gi|270293121|ref|ZP_06199332.1| exodeoxyribonuclease [Streptococcus sp. M143] gi|270279100|gb|EFA24946.1| exodeoxyribonuclease [Streptococcus sp. M143] Length = 275 Score = 128 bits (321), Expect = 9e-28, Method: Composition-based stats. Identities = 63/283 (22%), Positives = 100/283 (35%), Gaps = 31/283 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + +WN++S+ A + + + N DII +QETK K + L+ L Sbjct: 1 MKLISWNIDSLNAALTSDSTRAKLSQEVLQTLVAENADIIAIQETKLSAKGPTKKHLEIL 60 Query: 54 -----NYHIETCGQKS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 NY + Y G L K + VT Sbjct: 61 AELFPNYENTWRSSQEPARKGYAGTMFLYKKELTPTVTFPEIGAPSTMDLEGRIITLEFD 120 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 + G+ + + L+ E+P++ GDYN+ D Sbjct: 121 EFFVTQVYTPNAGDGLKRLEERQVWDVKYAEY---LAELDKEKPVLATGDYNVAHNEIDL 177 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221 NP FT E R F L GFTD R H D Y++W + S N G Sbjct: 178 ANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHVHGDVPERYTWWAQRSKTSKINNTGW 237 Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 RID+ + S + + ID+ R DHTP+++ +++ Sbjct: 238 RIDYWLTSNRVADKVTKSDMIDSGARQ-----DHTPIVMEIEL 275 >gi|73921677|sp|Q68G58|APEX2_MOUSE RecName: Full=DNA-(apurinic or apyrimidinic site) lyase 2; AltName: Full=APEX nuclease 2; AltName: Full=Apurinic-apyrimidinic endonuclease 2; Short=AP endonuclease 2 gi|51259055|gb|AAH78633.1| Apurinic/apyrimidinic endonuclease 2 [Mus musculus] Length = 516 Score = 128 bits (321), Expect = 9e-28, Method: Composition-based stats. Identities = 60/335 (17%), Positives = 105/335 (31%), Gaps = 63/335 (18%) Query: 3 VVTVATWNVNSIRARIHNLA------------AWIKENNPDIICLQETKTEDKNF--PFE 48 ++ V +WN+N IR+ + LA + E + DI+CLQETK P Sbjct: 1 MLRVVSWNINGIRSPLQGLACQEPSSCPTALRRVLDELDADIVCLQETKVTRDVLTEPLA 60 Query: 49 TLQSLNYHIETCGQKS-YNGVAILSKYQPIEI---------------VTHLPGDDLDVQA 92 ++ N + +S Y+GVA K + G+ + Sbjct: 61 IVEGYNSYFSFSRSRSGYSGVATFCKDSATPVAAEEGLSGVFATLNGDIGCYGNMDEFTQ 120 Query: 93 ---------------RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF 137 + T +TL + N+Y PH +P + K+ + + Sbjct: 121 EELRVLDSEGRALLTQHKIRTLEGKEKTLTLINVYCPHADPGKPERLTFKMRFYRLLQMR 180 Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCY-----------NPIIWENDACFTLEVRQSFQKL 186 A L +I GD N +P D W + Sbjct: 181 AEALLAAGSHVIILGDLNTAHRPIDHCDASSLECFEEDPGRKWMDGLLSNPGDEAGPHIG 240 Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT-SLLHSARIDTKP 245 M + ++ W + + N G R+D+++ ++ + + Sbjct: 241 LFMDSYRYL--HPKQQRAFTCWSVVSGARHLNYGSRLDYVLGDRALVIDTFQASFLLPEV 298 Query: 246 RGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 G SDH PV L++ KQ + P Sbjct: 299 MG----SDHCPVGAVLNVSCVPAKQCPALCTRFLP 329 >gi|21541818|ref|NP_084219.1| DNA-(apurinic or apyrimidinic site) lyase 2 [Mus musculus] gi|19912820|dbj|BAB88654.1| apurinic/apyrimidinic endonuclease 2 [Mus musculus] gi|22830557|dbj|BAC11807.1| apurinic/apyrimidinic endonuclease 2 [Mus musculus] gi|26341548|dbj|BAC34436.1| unnamed protein product [Mus musculus] gi|123223479|emb|CAM21421.1| apurinic/apyrimidinic endonuclease 2 [Mus musculus] gi|148675566|gb|EDL07513.1| apurinic/apyrimidinic endonuclease 2, isoform CRA_a [Mus musculus] Length = 516 Score = 128 bits (321), Expect = 9e-28, Method: Composition-based stats. Identities = 60/335 (17%), Positives = 105/335 (31%), Gaps = 63/335 (18%) Query: 3 VVTVATWNVNSIRARIHNLA------------AWIKENNPDIICLQETKTEDKNF--PFE 48 ++ V +WN+N IR+ + LA + E + DI+CLQETK P Sbjct: 1 MLRVVSWNINGIRSPLQGLACQEPSSCPTALRRVLDELDADIVCLQETKVTRDVLTEPLA 60 Query: 49 TLQSLNYHIETCGQKS-YNGVAILSKYQPIEI---------------VTHLPGDDLDVQA 92 ++ N + +S Y+GVA K + G+ + Sbjct: 61 IVEGYNSYFSFSRSRSGYSGVATFCKDSATPVAAEEGLSGVFATLNGDIGCYGNMDEFTQ 120 Query: 93 ---------------RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF 137 + T +TL + N+Y PH +P + K+ + + Sbjct: 121 EELRVLDSEGRALLTQHKIRTLEGKEKTLTLINVYCPHADPGKPERLTFKMRFYRLLQMR 180 Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCY-----------NPIIWENDACFTLEVRQSFQKL 186 A L +I GD N +P D W + Sbjct: 181 AEALLAAGSHVIILGDLNTAHRPIDHCDASSLECFEEDPGRKWMDGLLSNPGDEAGPHIG 240 Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT-SLLHSARIDTKP 245 M + ++ W + + N G R+D+++ ++ + + Sbjct: 241 LFMDSYRYL--HPKQQRAFTCWSVVSGARHLNYGSRLDYVLGDRALVIDTFQASFLLPEV 298 Query: 246 RGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 G SDH PV L++ KQ + P Sbjct: 299 MG----SDHCPVGAVLNVSCVPAKQCPALCTRFLP 329 >gi|146320518|ref|YP_001200229.1| putative 3'-exo-deoxyribonuclease [Streptococcus suis 98HAH33] gi|145691324|gb|ABP91829.1| putative 3'-exo-deoxyribonuclease [Streptococcus suis 98HAH33] Length = 276 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 61/281 (21%), Positives = 107/281 (38%), Gaps = 30/281 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + +WN++S+ A + + + + DII +QETK DK + L+ L Sbjct: 1 MKLISWNIDSLNAALTAESPRALLSRAVIDTLVTEDADIIAIQETKLSDKGPTKKHLEIL 60 Query: 54 NYHIETCGQ----------KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 + Q ++ + + P T+ Sbjct: 61 ESYFPGICQGPGRSSVEPARTCYAGTLFLYKNHLTPTITFPEIGAPTTMDSEGRIITLEF 120 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 + +Y P+ D +I ++ +L+ +P++ GDYN+ + D Sbjct: 121 DDFYVTQVYTPNAGDGLKRLADRQIWDVQ--YADYLAKLDSHKPVLATGDYNVAHKEIDL 178 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221 NP FT E RQ F L GFTD R H D + Y++W + S N G Sbjct: 179 ANPASNRQSPGFTDEERQGFTNLLAKGFTDTFRHLHGDVLNAYTWWAQRSRTSKINNTGW 238 Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSL 261 RID+ ++S + + ID+ R DHTP+++ + Sbjct: 239 RIDYWLVSDRIADKVSKSDMIDSGARQ-----DHTPIVMEI 274 >gi|256847688|ref|ZP_05553133.1| exodeoxyribonuclease III [Lactobacillus coleohominis 101-4-CHN] gi|256715377|gb|EEU30353.1| exodeoxyribonuclease III [Lactobacillus coleohominis 101-4-CHN] Length = 275 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 66/282 (23%), Positives = 109/282 (38%), Gaps = 29/282 (10%) Query: 4 VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + +WN++SI A + + I + PD+I +QETK + L Sbjct: 1 MKFISWNIDSINAALTGTSTRAGETRDVLHKIADLVPDVIAIQETKLSKNGPTKKHFTVL 60 Query: 54 N-----YHIETC----GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 N Y + + + + P T+ Sbjct: 61 NELFPDYQVAWRSSVEPARKGYAGTMYLYRTGLTPKISYPQIGAPEPMDNEGRMITLEFP 120 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 + +Y P+ + +I R Q+L+ ++P+I +GD+N+ +P D Sbjct: 121 YFFVTEVYTPNSGTGLRRLAERQIWD--DRYREYLQQLDQQKPVIASGDFNVAHEPIDLA 178 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYY-ADSWSKNKGIR 222 +P + A FT E R+ F KL GFTD+ R H YS+W S N G R Sbjct: 179 HPENNHHSAGFTDEEREHFTKLLKAGFTDSFRHLHPEEKGAYSWWAQRVITSKQNNSGWR 238 Query: 223 IDHIMLSPEATSL-LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 ID+ ++S + S+ IDT R DHTP+ + +D+ Sbjct: 239 IDYWLVSDRIADKVVKSSMIDTGARR-----DHTPIELDIDL 275 >gi|313106759|ref|ZP_07792975.1| catabolite repression control protein [Pseudomonas aeruginosa 39016] gi|310879477|gb|EFQ38071.1| catabolite repression control protein [Pseudomonas aeruginosa 39016] Length = 254 Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats. Identities = 60/258 (23%), Positives = 105/258 (40%), Gaps = 13/258 (5%) Query: 10 NVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ--KSYN 66 NVN I+A L +W++ N D+ICLQ+T+ + + Q Y + C Sbjct: 2 NVNGIQAAAERGLLSWLQAQNADVICLQDTRASAFDLDDPSFQLDGYFLYACDAELPEQG 61 Query: 67 GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDD 126 GVA+ S+ QP +++ L + D R+++A F + L + Sbjct: 62 GVALYSRLQPKAVISGLGFETADRYGRYLQADFDKVS-----IATLLLPSGQSGDESLNQ 116 Query: 127 KISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI-IWENDACFTLEVRQSFQK 185 K ++ F + S++ I+ G + Q D N + E + Sbjct: 117 KFKFMDDFTHYLSKQRRKRREYIYCGSLYVAHQKMDVKNWRECQQMPGFLAPERAWLDEV 176 Query: 186 LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKP 245 N+G+ DA+R +S+W + N G R D+ +L+P + +A++ +P Sbjct: 177 FGNLGYADALREVSREGDQFSWWPDSEQAEMLNLGWRFDYQVLTPGLRRFVRNAKLPRQP 236 Query: 246 RGWTKPSDHTPVIVSLDI 263 R S H P+IV D Sbjct: 237 R----FSQHAPLIVDYDW 250 >gi|300215075|gb|ADJ79491.1| Exodeoxyribonuclease III [Lactobacillus salivarius CECT 5713] Length = 275 Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 62/285 (21%), Positives = 108/285 (37%), Gaps = 35/285 (12%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTED----------- 42 + + +WN++S+ A + + A I + NPDII +QETK Sbjct: 1 MKLISWNIDSLNAALTSDSARAKQSREVLATIIDENPDIIAIQETKLSATGPTKKHQTIL 60 Query: 43 -KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI 101 + FP + + + + + P D T+ Sbjct: 61 AEQFPDYEIA---WRSSQEPARKGYAGTMFLYKNNLNPTISYPEIDAPEPMDSEGRIITL 117 Query: 102 NTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161 + +Y P+ + ++ L+ +PL+ +GD+N+ + Sbjct: 118 EFDNFYVTQVYTPNAGDGLRRLAERQVWD--EKYADYLVSLDQNKPLLSSGDFNVAHKEI 175 Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNK 219 D +P + A FT E R F L N GFTD R H D +YS+W + S N Sbjct: 176 DLAHPGNNHHSAGFTDEERAGFTNLLNKGFTDTFRYVHGDVKDVYSWWAQRSRTSKINNS 235 Query: 220 GIRIDHIMLSPEATSLLHSARI-DTKPRGWTKPSDHTPVIVSLDI 263 G RID+ + S + + + D+ R DHTP+++ ++I Sbjct: 236 GWRIDYWLASNRIADKIVRSEMLDSGERR-----DHTPIVLEINI 275 >gi|327474597|gb|EGF20002.1| exodeoxyribonuclease [Streptococcus sanguinis SK408] gi|328946601|gb|EGG40739.1| exodeoxyribonuclease [Streptococcus sanguinis SK1087] Length = 275 Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 60/283 (21%), Positives = 100/283 (35%), Gaps = 31/283 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + +WN++S+ A + + ++ N DII +QETK + L+ L Sbjct: 1 MKLISWNIDSLNAALTSDSARAQLSQAVLQTLQAENADIIAIQETKLSATGPTKKHLEIL 60 Query: 54 -----NYHIETCGQKS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 +Y + Y G L K + VT Sbjct: 61 TNLFPDYENTWRSSQEPARKGYAGTMFLYKKELTPTVTFPEIGAPSTMDVEGRIITLEFD 120 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 G+ + + L+ ++P++ GDYN+ + D Sbjct: 121 DFFVTQVYTPNAGDGLKRL---EDRQVWDAKYAEYLATLDGQKPVLATGDYNVAHKEIDL 177 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221 NP FT E R F L GFTD R H D Y++W + S N G Sbjct: 178 ANPASNRRSPGFTDEERAGFTNLLAKGFTDTFRHLHGDIPDQYTWWAQRSKTSKINNTGW 237 Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 RID+ + S + + ID+ R DHTP+++ +++ Sbjct: 238 RIDYWLTSNRVADKVTKSDMIDSGARQ-----DHTPIVMEIEL 275 >gi|227530634|ref|ZP_03960683.1| exodeoxyribonuclease III [Lactobacillus vaginalis ATCC 49540] gi|227349415|gb|EEJ39706.1| exodeoxyribonuclease III [Lactobacillus vaginalis ATCC 49540] Length = 275 Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 64/283 (22%), Positives = 109/283 (38%), Gaps = 31/283 (10%) Query: 4 VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + +WN++SI A + + I +PD+I +QETK + L L Sbjct: 1 MKLISWNIDSINAALTGTSTRAEETRSVLHKIAGKHPDVIAIQETKLSKNGPTKKHLAVL 60 Query: 54 -----NYHIETCG-----QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 +Y + +K Y G L + VT+ + Sbjct: 61 QELFPDYQVAWRSSVEPARKGYAGTMYLYLKEYEPTVTYPQIGAPETMDDEGRIITLEFP 120 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 G+ + R Q+L+ ++P+I +GD+N+ + D Sbjct: 121 DFFVTEVYTPNSGSGLKRLA---DRQVWDDCYREYLQKLDQQKPVIASGDFNVAHESIDL 177 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYY-ADSWSKNKGI 221 +P + A FT E R+ F KL GFTD+ R + YS+W S N G Sbjct: 178 AHPENNHHSAGFTDEEREHFTKLLAAGFTDSFRHLNPEKTGAYSWWAQRVITSKQNNSGW 237 Query: 222 RIDHIMLSPEATSLLHSA-RIDTKPRGWTKPSDHTPVIVSLDI 263 RID+ ++S + ++ ID+ R DHTP+ + +D+ Sbjct: 238 RIDYWLVSDRLADKIKNSTMIDSGERR-----DHTPIELDIDL 275 >gi|90962461|ref|YP_536377.1| exodeoxyribonuclease III [Lactobacillus salivarius UCC118] gi|301299216|ref|ZP_07205503.1| exodeoxyribonuclease III [Lactobacillus salivarius ACS-116-V-Col5a] gi|90821655|gb|ABE00294.1| Exodeoxyribonuclease III [Lactobacillus salivarius UCC118] gi|300853176|gb|EFK80773.1| exodeoxyribonuclease III [Lactobacillus salivarius ACS-116-V-Col5a] Length = 275 Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 62/285 (21%), Positives = 109/285 (38%), Gaps = 35/285 (12%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTED----------- 42 + + +WN++S+ A + + A I + NPDII +QETK Sbjct: 1 MKLISWNIDSLNAALTSDSARAKQSREVLATIIDENPDIIAIQETKLSATGPTKKHQTIL 60 Query: 43 -KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI 101 + FP + + + + + P D T+ Sbjct: 61 AEQFPDYEIA---WRSSQEPARKGYAGTMFLYKNNLNPTISYPEIDAPEPMDSEGRIITL 117 Query: 102 NTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161 + + +Y P+ + ++ L+ +PL+ +GD+N+ + Sbjct: 118 EFDSFYVTQVYTPNAGDGLRRLAERQVWD--EKYADYLVSLDQNKPLLSSGDFNVAHKEI 175 Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNK 219 D +P + A FT E R F L N GFTD R H D +YS+W + S N Sbjct: 176 DLAHPGNNHHSAGFTDEERAGFTNLLNKGFTDTFRYVHGDVKDVYSWWAQRSRTSKINNS 235 Query: 220 GIRIDHIMLSPEATSLLHSARI-DTKPRGWTKPSDHTPVIVSLDI 263 G RID+ + S + + + D+ R DHTP+++ ++I Sbjct: 236 GWRIDYWLASNRIADKIVRSEMLDSGERR-----DHTPIVLEINI 275 >gi|326517565|dbj|BAK03701.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 296 Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 67/270 (24%), Positives = 117/270 (43%), Gaps = 23/270 (8%) Query: 4 VTVATWNVNSIRARIH--NLAAWIK-ENNPDIICLQETKTEDKNFPFETLQ------SLN 54 + + +WNVN + + ++ + N D++CLQET ++ + + + N Sbjct: 40 MKILSWNVNGLSNIVQSGGFSSALAQRENFDVLCLQETHLKEGDV--KDFKNLIPGYEYN 97 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 Y + + Y+G ++S+ +PI + + + D + R I F + N Y+P Sbjct: 98 YWSCSVARLDYSGTGVISRVKPISVQYGIGIAEHDQEGRVITLEFE----NFYLVNAYVP 153 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 + + ++ ++LE +P+I AGD N Q D +NP DA Sbjct: 154 NSG-RGLRRLVYRVDNWDPSFSDFVEKLESFKPVIVAGDLNCARQSIDIHNPAAKTEDAG 212 Query: 175 FTLEVRQSFQKLQNMG-FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 FT E R+SFQ +M F D R H Y+FW + NKG R+D+ + S Sbjct: 213 FTEEERESFQINFDMRGFVDTFRKQHPKAVGYTFWG--ENQRCNNKGWRLDYFLASGSII 270 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +H + I SDH+P+ + L + Sbjct: 271 DRVHDSYILPDVTS----SDHSPIGLVLKL 296 >gi|323351082|ref|ZP_08086739.1| exodeoxyribonuclease [Streptococcus sanguinis VMC66] gi|322122806|gb|EFX94515.1| exodeoxyribonuclease [Streptococcus sanguinis VMC66] gi|325687044|gb|EGD29067.1| exodeoxyribonuclease [Streptococcus sanguinis SK72] Length = 275 Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 59/283 (20%), Positives = 100/283 (35%), Gaps = 31/283 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + +WN++S+ A + + ++ N D+I +QETK + L+ L Sbjct: 1 MKLISWNIDSLNAALTSDSARAQLSQAVLQTLQAENADVIAIQETKLSASGPTKKHLEIL 60 Query: 54 -----NYHIETCGQKS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 +Y + Y G L K + VT Sbjct: 61 TNLFPDYENTWRSSQEPARKGYAGTMFLYKKELTPTVTFPEIGAPSTMDVEGRIITLEFD 120 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 G+ + L+ ++P++ GDYN+ + D Sbjct: 121 GFFVTQVYTPNAGDGLKRLD---DRQVWDAKYAEYLATLDEQKPVLATGDYNVAHKEIDL 177 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221 NP FT E R F L GFTD R H D + Y++W + S N G Sbjct: 178 ANPASNRRSPGFTDEERAGFTNLLAKGFTDTFRHLHGDIPNQYTWWAQRSKTSKINNTGW 237 Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 RID+ + S + + ID+ R DHTP+++ +++ Sbjct: 238 RIDYWLTSNRVADKVTKSDMIDSGARQ-----DHTPIVMEIEL 275 >gi|307705505|ref|ZP_07642359.1| exodeoxyribonuclease III [Streptococcus mitis SK597] gi|307620963|gb|EFO00046.1| exodeoxyribonuclease III [Streptococcus mitis SK597] Length = 275 Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 61/283 (21%), Positives = 99/283 (34%), Gaps = 31/283 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + +WN++S+ A + + + N DII +QETK K + L+ L Sbjct: 1 MKLISWNIDSLNAALTSDSARAKLSQEVLQTLVAENADIIAIQETKLSAKGPTKKHLEIL 60 Query: 54 -----NYHIETCGQKS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 Y + Y G L K + VT Sbjct: 61 EELFPGYANTWRSSQEPARKGYAGTMFLYKKELSPTVTFPEIGAPSTMDLEGRIITLEFD 120 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 + G+ + + L+ ++P++ GDYN+ D Sbjct: 121 KFFVTQVYTPNAGDGLKRLEERQVWDVKYAEY---LAELDKQKPVLATGDYNVAHNEIDL 177 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221 NP FT E R F L GFTD R H D Y++W + S N G Sbjct: 178 ANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHIHGDAPERYTWWAQRSKTSKINNTGW 237 Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 RID+ + S + + ID+ R DHTP+++ +++ Sbjct: 238 RIDYWLTSNRIADNVTKSDMIDSGARQ-----DHTPIVMEIEL 275 >gi|326804146|ref|YP_004321964.1| exodeoxyribonuclease III [Aerococcus urinae ACS-120-V-Col10a] gi|326650889|gb|AEA01072.1| exodeoxyribonuclease III [Aerococcus urinae ACS-120-V-Col10a] Length = 281 Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 62/280 (22%), Positives = 107/280 (38%), Gaps = 29/280 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPF------ 47 + +WN++S+ A + + I + +PD+I +QETK K Sbjct: 1 MKFISWNIDSLNAALTSDSNRAQLSRQVLETIDQYDPDLIAIQETKLSAKGPTKKHQEAL 60 Query: 48 -ETLQSLN--YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 E N + + ++ + +E + P T++ Sbjct: 61 EEWFPDYNNAWVSSVEPARKSYAGNMVLYKKSLEPIITYPKIGAPEPMDSEGRIITLDFG 120 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 +Y P+ + ++ +L+ E+PLI GD+N+ + D Sbjct: 121 AFYFTQVYTPNAGNGLKRLAERQVWD--EKYAQYLSQLDQEKPLIATGDFNVAHKEIDLA 178 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIR 222 +P A FT E R F KL + GFTD R H D +YS+W S N G R Sbjct: 179 HPENNHKSAGFTDEERSGFTKLLDQGFTDTFRHIHGDVEGVYSWWAQRVKTSKINNSGWR 238 Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSL 261 ID+ ++S + + + ID+ R DHTP+ + + Sbjct: 239 IDYFLVSDRIANAVEKSEMIDSGTRQ-----DHTPIYLEI 273 >gi|242054697|ref|XP_002456494.1| hypothetical protein SORBIDRAFT_03g037250 [Sorghum bicolor] gi|241928469|gb|EES01614.1| hypothetical protein SORBIDRAFT_03g037250 [Sorghum bicolor] Length = 325 Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 64/268 (23%), Positives = 115/268 (42%), Gaps = 19/268 (7%) Query: 4 VTVATWNVNSIRARIH-NL--AAWIKENNPDIICLQETKTEDKNFPF--ETLQSLNYHIE 58 + + +WNVN ++ + + N D++CLQET +++N + +Y Sbjct: 69 MKILSWNVNGLQTIVQSGFSADELVGRENFDVLCLQETHLQERNVDLFKNLVPEYDYTYW 128 Query: 59 TCGQKS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 +C Y+G A++S+ QPI + L + D + R I F + N Y+P+ Sbjct: 129 SCSVARLGYSGTAVISRVQPISVQYGLGVPEHDQEGRLITLEFD----DFYLVNAYVPNS 184 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + + +++ ++LE +P+I AGD N + D +NP A FT Sbjct: 185 G-RGLRRLNYRVNEWDPCFSDFIKKLESSKPVIVAGDLNCARESIDIHNPQAKTEAAGFT 243 Query: 177 LEVRQ-SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 +E R+ + + G D R H Y+FW + NKG R+D+ + S Sbjct: 244 VEERESFEENFSSEGLIDTFRKQHPNAVAYTFWG--ENQRITNKGWRLDYFLASESIADK 301 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +H + SDH+P+ + L + Sbjct: 302 VHDSYTLPDV----SLSDHSPIGLVLKL 325 >gi|327470504|gb|EGF15960.1| exodeoxyribonuclease [Streptococcus sanguinis SK330] Length = 275 Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 59/283 (20%), Positives = 100/283 (35%), Gaps = 31/283 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + +WN++S+ A + + ++ + DII +QETK + L+ L Sbjct: 1 MKLISWNIDSLNAALTSDSARAQLSQAVLQTLQAEDADIIAIQETKLSATGPTKKHLEIL 60 Query: 54 -----NYHIETCGQKS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 +Y + Y G L K + VT Sbjct: 61 TNLFPDYENTWRSSQEPARKGYAGTMFLYKKELTPTVTFPEIGAPSTMDVEGRIITLEFD 120 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 G+ + L+ ++P++ GDYN+ + D Sbjct: 121 GFFVTQVYTPNAGDGLKRLD---DRQVWDAKYAEYLATLDGQKPVLATGDYNVAHKEIDL 177 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221 NP FT E R F L GFTD R H D + Y++W + S N G Sbjct: 178 ANPASNRRSPGFTDEERAGFTNLLAKGFTDTFRHLHGDIPNQYTWWAQRSKTSKINNTGW 237 Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 RID+ + S + + ID+ R DHTP+++ +++ Sbjct: 238 RIDYWLTSNRVADKVTKSDMIDSGARQ-----DHTPIVMEIEL 275 >gi|294787015|ref|ZP_06752269.1| exodeoxyribonuclease III [Parascardovia denticolens F0305] gi|315226658|ref|ZP_07868446.1| exodeoxyribonuclease [Parascardovia denticolens DSM 10105] gi|294485848|gb|EFG33482.1| exodeoxyribonuclease III [Parascardovia denticolens F0305] gi|315120790|gb|EFT83922.1| exodeoxyribonuclease [Parascardovia denticolens DSM 10105] Length = 277 Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 60/284 (21%), Positives = 102/284 (35%), Gaps = 31/284 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + TWN++S+ A + + I +P + +QETK + SL Sbjct: 1 MKFVTWNIDSLNAALTGDSERSRLSRQVLHDIAACSPQVFAIQETKLPAAGPSKKQKASL 60 Query: 54 -----NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF------TIN 102 Y I + L Q E T+ Sbjct: 61 ESIFPGYWIAWRSSQEPARKGYAGTMCLYRPEGGQEVSPLYPQIGAPEPMDSEGRILTLE 120 Query: 103 TQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD 162 + ++Y P+ + ++ R Q L+ +P+I GD+N+ + D Sbjct: 121 FPGFYLTDVYTPNSGDGLRRLEERQVWD--DRYRSYLQDLDQVKPVIACGDFNVAHEEID 178 Query: 163 CYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYA-DSWSKNKG 220 +P A FT E R F +L + GF D R H +Y++W A S + N G Sbjct: 179 LAHPASNRRSAGFTDEERDKFGQLLDAGFADTFRRLHPNQAGVYTWWAQRAVTSKANNSG 238 Query: 221 IRIDHIMLSPEATSLLHSARI-DTKPRGWTKPSDHTPVIVSLDI 263 RID+ ++S + + DT R DH P+++ +D+ Sbjct: 239 WRIDYWLVSDRLMDKVRGVSVMDTGERR-----DHAPLVMEIDL 277 >gi|327462087|gb|EGF08416.1| exodeoxyribonuclease [Streptococcus sanguinis SK1057] Length = 322 Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 60/283 (21%), Positives = 99/283 (34%), Gaps = 31/283 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + +WN++S+ A + + ++ N DII +QETK + L+ L Sbjct: 48 MKLISWNIDSLNAALTSDSARAQLSQAVLQTLQAENADIIAIQETKLSATGPTKKHLEIL 107 Query: 54 -----NYHIETCGQKS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 +Y + Y G L K + VT Sbjct: 108 TNLFPDYENTWRSSQEPARKGYAGTMFLYKKELTPTVTFPEIGAPSTMDVEGRIITLEFD 167 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 G+ + L+ ++P++ GDYN+ + D Sbjct: 168 GFFVTQVYTPNAGDGLKRLD---DRQVWDAKYAEYLATLDGQKPVLATGDYNVAHKEIDL 224 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221 NP FT E R F L GFTD R H D Y++W + S N G Sbjct: 225 ANPASNRRSPGFTDEERAGFTNLLAKGFTDTFRHLHGDIPDQYTWWAQRSKTSKINNTGW 284 Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 RID+ + S + + ID+ R DHTP+++ +++ Sbjct: 285 RIDYWLTSNRVADKVTKSDMIDSGARQ-----DHTPIVMEIEL 322 >gi|115844794|ref|XP_789515.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115945899|ref|XP_001187208.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 302 Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 75/262 (28%), Positives = 125/262 (47%), Gaps = 14/262 (5%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFET-LQSLNYHIETCG 61 + ++ WNV ++A I ++ + +PDI QETK + P E L + Sbjct: 49 LKISAWNVGGMKAWIKKGGIDYLTKESPDIFFAQETKIDATKPPPEADLDDYHITYNAAE 108 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+GVA+ SK +P+ + + ++ D + R I A + + +Y+P+ + Sbjct: 109 KKGYSGVALFSKKEPLSVTKGMGIEEHDKEGRLITAEYD----SFYFVGVYVPNSSRKLV 164 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC-FTLEVR 180 D + W K F + + L+ ++P+I GD N+ + D NP N FT + R Sbjct: 165 R-LDYRQEWDKDFHAYLKK-LDAKKPVICCGDMNVAHEEIDLKNPKSNRNKTPGFTDQER 222 Query: 181 QSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + F L +MGF D+ R + YSFW Y + +KN G R+D+ ++S L Sbjct: 223 EGFTSLLDMGFVDSFRHLYPEEADAYSFWTYMGNCRAKNVGWRLDYGVISKALVPKLC-- 280 Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261 D + R T SDH P++VSL Sbjct: 281 --DNQMRLQTFGSDHCPMVVSL 300 >gi|324993723|gb|EGC25642.1| exodeoxyribonuclease [Streptococcus sanguinis SK405] gi|324994964|gb|EGC26877.1| exodeoxyribonuclease [Streptococcus sanguinis SK678] gi|327462994|gb|EGF09315.1| exodeoxyribonuclease [Streptococcus sanguinis SK1] Length = 275 Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats. Identities = 60/283 (21%), Positives = 100/283 (35%), Gaps = 31/283 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + +WN++S+ A + + ++ N DII +QETK + L+ L Sbjct: 1 MKLISWNIDSLNAALTSDSARAKLSQAVLQTLQAENADIIAIQETKLSATGPTKKHLEIL 60 Query: 54 -----NYHIETCGQKS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 +Y + Y G L K + VT Sbjct: 61 TNLFPDYENTWRSSQEPARKGYAGTMFLYKKELTPTVTFPEIGAPSTMDVEGRIITLEFD 120 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 G+ + L+ ++P++ GDYN+ + D Sbjct: 121 GFFVTQVYTPNAGDGLKRLD---DRQVWDAKYAEYLATLDQQKPVLATGDYNVAHKEIDL 177 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221 NP FT E R F L GFTD R H D + Y++W + S N G Sbjct: 178 ANPASNRRSPGFTDEERAGFTNLLAKGFTDTFRHLHGDIPNQYTWWAQRSKTSKINNTGW 237 Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 RID+ + S + + ID+ R DHTP+++ +++ Sbjct: 238 RIDYWLTSNRVADKVTKSDMIDSGARQ-----DHTPIVMEIEL 275 >gi|325694998|gb|EGD36902.1| exodeoxyribonuclease [Streptococcus sanguinis SK150] Length = 275 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 60/283 (21%), Positives = 100/283 (35%), Gaps = 31/283 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + +WN++S+ A + + ++ N DII +QETK + L+ L Sbjct: 1 MKLISWNIDSLNAALTSDSARAQLSQAVLQTLQAENADIIAIQETKLSATGPTKKHLEIL 60 Query: 54 -----NYHIETCGQKS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 +Y + Y G L K + VT Sbjct: 61 TNLFPDYENTWRSSQEPARKGYAGTMFLYKKELTPTVTFPEIGAPSTMDVEGRIITLEFD 120 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 G+ + L+ ++P++ GDYN+ + D Sbjct: 121 GFFVTQVYTPNAGDGLKRLD---DRQVWDAKYAEYLGTLDKQKPVLATGDYNVAHKEIDL 177 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221 NP FT E R F L GFTD R H D + Y++W + S N G Sbjct: 178 ANPASNRRSPGFTDEERAGFTNLLAKGFTDTFRHLHGDIPNQYTWWAQRSKTSKINNTGW 237 Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 RID+ + S + + ID+ R DHTP+++ +++ Sbjct: 238 RIDYWLTSNRVADKVTKSDMIDSGARQ-----DHTPIVMEIEL 275 >gi|254482734|ref|ZP_05095972.1| exodeoxyribonuclease III (xth) subfamily [marine gamma proteobacterium HTCC2148] gi|214037093|gb|EEB77762.1| exodeoxyribonuclease III (xth) subfamily [marine gamma proteobacterium HTCC2148] Length = 254 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 56/263 (21%), Positives = 104/263 (39%), Gaps = 14/263 (5%) Query: 4 VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETL--QSLNYHIETC 60 + V +++ + I+ A W+KE + D +C+Q+ + + + + N + Sbjct: 1 MRVISFSADGIKNAAEKGFYDWLKEQDADFVCIQDLRCSEYDLQDNLFFPEEYNPYFFDD 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 NGVAI + P I+T L D D++ R+I+A + + IG L P P Sbjct: 61 IDGKANGVAIYCRQLPKAIMTGLGFADFDMEGRYIQADYE----NISIGCLLAPSAEPGN 116 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + + K + + + + G++N+ P D + + F E R Sbjct: 117 AEQQSRKNDFYELLGNHLQKVRNKRREFVICGNWNVAHTPADVQDTERNSTISGFLAEER 176 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 Q +L G+ D R + +++W + N G R D ++S + + Sbjct: 177 QWMNELFTEGYIDPFREINSDQDEFTWWP--EGDRATN-GWRSDFQVISKDLQYAVDYGA 233 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263 I + S H PVI+ DI Sbjct: 234 IYKS----REFSTHAPVIMDYDI 252 >gi|254784446|ref|YP_003071874.1| histidine kinase [Teredinibacter turnerae T7901] gi|237684162|gb|ACR11426.1| histidine kinase [Teredinibacter turnerae T7901] Length = 257 Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats. Identities = 58/266 (21%), Positives = 98/266 (36%), Gaps = 14/266 (5%) Query: 4 VTVATWNVNSI-RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + V + V+ I +A L WI+E + DIICLQ+ + + + Y Sbjct: 1 MRVISLCVDGIHQAAQRGLFDWIEEQDADIICLQDLRALEYELDDDIFHPDGYFAYFFDS 60 Query: 62 -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 K YNGVAI +++QP ++ L +E + L Sbjct: 61 GVKHYNGVAIYTRHQPKALIYGLGFASGVD----MEGRYLQVDFERYSIGSLLAPTAFSE 116 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + + KI + F + IF G++ + D N N + + + Sbjct: 117 TESQEVKIKFFDDFQALLHKVTRKRRHFIFCGNWAMAHSKKDVENWQNNTNQSGYLPHEQ 176 Query: 181 QSFQK-LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 Q + + +G+ DA R YS+W + + G R D+ ++S T + A Sbjct: 177 QWMNQLFRQLGYADAFRVAVPEAGEYSWWP--SGKIGEGDGWRTDYQVVSEALTRKVEYA 234 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPE 265 + S H PVIV DI + Sbjct: 235 AMYK----TRHFSSHLPVIVDYDIDD 256 >gi|157150318|ref|YP_001450810.1| exodeoxyribonuclease III [Streptococcus gordonii str. Challis substr. CH1] gi|157075112|gb|ABV09795.1| exodeoxyribonuclease III [Streptococcus gordonii str. Challis substr. CH1] Length = 275 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 61/283 (21%), Positives = 102/283 (36%), Gaps = 31/283 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + +WN++S+ A + + ++ N DII +QETK + L+ L Sbjct: 1 MKLISWNIDSLNAALTSDSARAQLSQAVLQTLQAENADIIAIQETKLSATGPTKKHLEIL 60 Query: 54 -----NYHIETCGQKS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 +Y + Y G L K + IVT Sbjct: 61 TNLFPDYENTWRSSQEPARKGYAGTMFLYKKELSPIVTFPEIGAPSTMDVEGRIITLEFD 120 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 G+ + + L+ ++P++ GDYN+ + D Sbjct: 121 DFFVTQVYTPNAGDGLKRL---EDRQVWDAKYAEYLATLDEQKPVLATGDYNVAHKEIDL 177 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221 NP FT E R F L GFTD R H D + Y++W + S N G Sbjct: 178 ANPASNRRSPGFTDEERTGFTNLLAKGFTDTFRYLHGDIPNQYTWWAQRSKTSKINNTGW 237 Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 RID+ + S + + ID+ R DHTP+++ +++ Sbjct: 238 RIDYWLTSNRVADKVTKSDMIDSGARQ-----DHTPIVMEIEL 275 >gi|167521904|ref|XP_001745290.1| hypothetical protein [Monosiga brevicollis MX1] gi|163776248|gb|EDQ89868.1| predicted protein [Monosiga brevicollis MX1] Length = 263 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 58/264 (21%), Positives = 98/264 (37%), Gaps = 14/264 (5%) Query: 6 VATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY---HIE 58 V +WNVN +RA + N L ++ NPD++ LQETK + + Y Sbjct: 3 VVSWNVNGLRAVLKNHPKALPDLVQAENPDLLFLQETKLQASHVADYANLLPGYTGLWSC 62 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + +K Y+G A + ++ G + IG G Sbjct: 63 SRAKKGYSGTAGATPTSDFRALSVQYGIKSAHHDQEGRTITVELPDLFVIGVYVPNSGQD 122 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + D +++ + LE +P++ GD N+ D YN A T + Sbjct: 123 LKR--LDYRLNEWNVDFLAYIRELEASKPVLVVGDLNVAHLDLDIYNAGHLVKSAGCTPQ 180 Query: 179 VRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 R +F + + GFTD R + +++W +KG+R+D+ + S Sbjct: 181 ERTAFTEFLDQGFTDTFRKLYPEHTGAFTYWSARTGGRQDSKGLRLDYAVCSNALLEANS 240 Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261 R G SDH P+ + L Sbjct: 241 PLRCLDSVMG----SDHCPIAIVL 260 >gi|227891490|ref|ZP_04009295.1| exodeoxyribonuclease III [Lactobacillus salivarius ATCC 11741] gi|227866637|gb|EEJ74058.1| exodeoxyribonuclease III [Lactobacillus salivarius ATCC 11741] Length = 275 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 62/285 (21%), Positives = 108/285 (37%), Gaps = 35/285 (12%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTED----------- 42 + + +WN++S+ A + + A I + NPDII +QETK Sbjct: 1 MKLISWNIDSLNAALTSDSARAKQSREVLATIIDENPDIIAIQETKLSATGPTKKHQTIL 60 Query: 43 -KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI 101 + FP + + + + + P D T+ Sbjct: 61 AEQFPDYEIT---WRSSQEPARKGYAGTMFLYKNNLNPTVSYPEIDAPEPMDSEGRIITL 117 Query: 102 NTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161 + +Y P+ + ++ L+ +PL+ +GD+N+ + Sbjct: 118 EFDNFYVTQVYTPNAGDGLRRLAERQVWD--EKYADYLVSLDQNKPLLSSGDFNVAHKEI 175 Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNK 219 D +P + A FT E R F L N GFTD R H D +YS+W + S N Sbjct: 176 DLAHPGNNHHSAGFTDEERAGFTNLLNKGFTDTFRYVHGDVKDVYSWWAQRSRTSKINNS 235 Query: 220 GIRIDHIMLSPEATSLLHSARI-DTKPRGWTKPSDHTPVIVSLDI 263 G RID+ + S + + + D+ R DHTP+++ ++I Sbjct: 236 GWRIDYWLASNRIADKIVRSEMLDSGERR-----DHTPIVLEINI 275 >gi|222152632|ref|YP_002561807.1| exodeoxyribonuclease [Streptococcus uberis 0140J] gi|222113443|emb|CAR41130.1| exodeoxyribonuclease [Streptococcus uberis 0140J] Length = 275 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 57/280 (20%), Positives = 102/280 (36%), Gaps = 25/280 (8%) Query: 4 VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFE----T 49 + + +WN++S+ A + + + +PDI+ +QETK + Sbjct: 1 MKLISWNIDSLNAALTGESPRALLSRAVLDTLVTEDPDILAIQETKLSATGPTKKHMEIL 60 Query: 50 LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 L H+ + + T P TL Sbjct: 61 LSYFPNHLHVWRSSVEPARKGYAGTLFLYRNTLNPVVTFPEIGAPDPMDAEGRIITLEFD 120 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRL---ELEEPLIFAGDYNIIPQPHDCYNP 166 + Y+ + ++ + + ++ L + +P++ GDYN+ D NP Sbjct: 121 DFYVTQVYTPNAGDQLRRLPERQEWDIKYAEYLASLDRNKPVLATGDYNVAHHEIDLANP 180 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIRID 224 A FT E R F L GFTD R H D ++Y++W + S N G RID Sbjct: 181 ASNRRSAGFTDEERAGFTALLAKGFTDTFRYLHGDIPNVYTWWAQRSKTSKINNTGWRID 240 Query: 225 HIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 + + S + + I + R DHTP+++ +D+ Sbjct: 241 YWLTSNRIADKVIKSEMIHSGERQ-----DHTPILLEIDL 275 >gi|325690669|gb|EGD32670.1| exodeoxyribonuclease [Streptococcus sanguinis SK115] Length = 275 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 60/283 (21%), Positives = 100/283 (35%), Gaps = 31/283 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + +WN++S+ A + + ++ N DII +QETK + L+ L Sbjct: 1 MKLISWNIDSLNAALTSDSARAKLSQAVLQTLQAENADIIAIQETKLSATGPTKKHLEIL 60 Query: 54 -----NYHIETCGQKS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 +Y + Y G L K + VT Sbjct: 61 TNLFPDYENTWRSSQEPARKGYAGTMFLYKKELTPTVTFPEIGAPSTMDVEGRIITLEFD 120 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 G+ + L+ ++P++ GDYN+ + D Sbjct: 121 GFFVTQVYTPNAGDGLKRLDDRQVWDVKYAEY---LATLDQQKPVLATGDYNVAHKEIDL 177 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221 NP FT E R F L GFTD R H D + Y++W + S N G Sbjct: 178 ANPASNRRSPGFTDEERAGFTNLLAKGFTDTFRHLHGDIPNQYTWWAQRSKTSKINNTGW 237 Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 RID+ + S + + ID+ R DHTP+++ +++ Sbjct: 238 RIDYWLTSNRVADKVTKSDMIDSGARQ-----DHTPIVMEIEL 275 >gi|116618622|ref|YP_818993.1| exonuclease III [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] gi|116097469|gb|ABJ62620.1| Exonuclease III [Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293] Length = 272 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 65/281 (23%), Positives = 113/281 (40%), Gaps = 30/281 (10%) Query: 4 VTVATWNVNSIRARIHNL-----AAW-----IKENNPDIICLQETKTEDKNFPF------ 47 + +WN++SI A + + W I PD+ +QETK + Sbjct: 1 MKFISWNIDSINAAVEHKSVRGEMTWSTLNEIATIRPDVFAIQETKLKSTGLTKKQATAI 60 Query: 48 -ETLQSLNYHIETCG-QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT 105 E + ++ + + Y+G +LSK +P ++ G + T T Sbjct: 61 AELFPEYHLYVNSSTARSGYSGTMVLSKVEPTQVEYPTIGAPGSMDLEGRIITLEFPTFF 120 Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165 L + I + R + L+ +P+IF+GD N+ Q D N Sbjct: 121 LSTVYTPNSGSSLIRLP----ERGEWDDKYREYIKTLDATKPVIFSGDMNVAHQEIDLKN 176 Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYAD-SWSKNKGIRI 223 P + A FT + R+ F L + GFTD R+ + +Y++W + S N G RI Sbjct: 177 PKPNRHSAGFTDQEREKFSALLDAGFTDTFRSLNPDTPSVYTWWAQISKTSKINNSGWRI 236 Query: 224 DHIMLSPEATSLLH-SARIDTKPRGWTKPSDHTPVIVSLDI 263 D+ ++S + S IDT R DH P+++ +++ Sbjct: 237 DYYLVSDRIAENVTESCVIDTGARQ-----DHAPILLEINV 272 >gi|328473849|gb|EGF44679.1| exodeoxyribonuclease III [Listeria monocytogenes 220] Length = 225 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 51/227 (22%), Positives = 90/227 (39%), Gaps = 12/227 (5%) Query: 38 TKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA 97 K ++ + +Y +K Y+G AI +K +P+ + L + D + R I Sbjct: 10 LKLQEGQIELDLPAYKDY-WNYAVKKGYSGTAIFTKVEPLSVQYGLGVPEHDTEGRVITL 68 Query: 98 TFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII 157 F + + + + L+ +P++ GD N+ Sbjct: 69 EFEEFFMVTVYTPNSQAELKRLDYRM------TFEDAILEYVKNLDKTKPVVLCGDLNVA 122 Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWS 216 + D NP +A F+ E R F + GF D+ R + YS+W Y ++ + Sbjct: 123 HEEIDLKNPKTNRKNAGFSDEERAKFSAFLDAGFIDSFRYFYPDLTDAYSWWSYRMNARA 182 Query: 217 KNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +N G RID+ ++S L A+I G SDH PV + L++ Sbjct: 183 RNTGWRIDYFVVSERLKDKLVDAKIHADVLG----SDHCPVELELNL 225 >gi|306829996|ref|ZP_07463183.1| exodeoxyribonuclease III [Streptococcus mitis ATCC 6249] gi|304428007|gb|EFM31100.1| exodeoxyribonuclease III [Streptococcus mitis ATCC 6249] Length = 275 Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats. Identities = 60/283 (21%), Positives = 98/283 (34%), Gaps = 31/283 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDK---NFPFETL 50 + + +WN++S+ A + + + N DII +QETK K E L Sbjct: 1 MKLISWNIDSLNAALTSDSARAKLSQEVLQTLVAENADIIAIQETKLSAKGPTKKHLEVL 60 Query: 51 QSL--NYHIETCGQKS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 + L Y + Y G L K + +T Sbjct: 61 EELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTITFPEIGAPSTMDVEGRIITLEFD 120 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 G+ + L+ ++P++ GDYN+ + D Sbjct: 121 DFFVTQVYTPNAGDGLKRLD---DRQVWDAKYAEYLATLDQQKPVLATGDYNVAHKEIDL 177 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221 NP FT E R F L GFTD R H D Y++W + S N G Sbjct: 178 ANPASNHRSPGFTDEERAGFTNLLATGFTDTFRHIHGDVPERYTWWAQRSKTSKINNTGW 237 Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 RID+ + S + + I++ R DHTP+++ +++ Sbjct: 238 RIDYWLTSNRVADKVTKSDMINSGARQ-----DHTPIVMEIEL 275 >gi|24380027|ref|NP_721982.1| putative exodeoxyribonuclease III [Streptococcus mutans UA159] gi|290579994|ref|YP_003484386.1| putative exodeoxyribonuclease III [Streptococcus mutans NN2025] gi|13182937|gb|AAK14994.1|AF233280_1 nuclease SmnA [Streptococcus mutans] gi|24378017|gb|AAN59288.1|AE014995_5 putative exodeoxyribonuclease III [Streptococcus mutans UA159] gi|254996893|dbj|BAH87494.1| putative exodeoxyribonuclease III [Streptococcus mutans NN2025] Length = 275 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 61/283 (21%), Positives = 107/283 (37%), Gaps = 31/283 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + +WN++S+ A + + + E + DI+ +QETK K + L+ L Sbjct: 1 MKLISWNIDSLNAALTSDSARALLSRAVLDTLMEQDADILAIQETKLSAKGPTKKHLRIL 60 Query: 54 -----NYHIETCG-----QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 +Y + +K Y G L K +T+ Sbjct: 61 KDYFPDYDVVWRSSVEPARKGYAGTMFLYKSSLQPTITYPEIGAPATMDDEGRIITLEFD 120 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 G+ + +L+ ++P++ GDYN+ + D Sbjct: 121 DFFVTQVYTPNAGDGLKRLDDRQIWDEKYAIY---LAQLDKQKPVLATGDYNVAHKEIDL 177 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221 +P FT E R F L GFTD R H D ++YS+W + S N G Sbjct: 178 AHPSSNRRSPGFTDEERAGFTHLLEQGFTDTFRYIHGDVPNVYSWWAQRSKTSKINNSGW 237 Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 RID+ ++S + + + ID+ R DHTP+++ +D+ Sbjct: 238 RIDYWLISNRLSDKILKSEMIDSGTRQ-----DHTPILLKIDL 275 >gi|195620624|gb|ACG32142.1| hypothetical protein [Zea mays] Length = 304 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 69/270 (25%), Positives = 118/270 (43%), Gaps = 19/270 (7%) Query: 2 SVVTVATWNVNSIRARIH-NL--AAWIKENNPDIICLQETKTEDKNFPF--ETLQSLNYH 56 + + + +WNVN ++A + + N D++CLQET E++N + +Y Sbjct: 46 NSMKILSWNVNGLQAIVQSGFSADELVARENFDVLCLQETHLEERNVDLFKNLVHEYDYT 105 Query: 57 IETCGQKS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 +C Y+G A++S+ QPI + L + D + R I F + N Y+P Sbjct: 106 CWSCSVARLGYSGTAVISRVQPISVQYGLGIPEHDQEGRLITLEFD----DFYLVNAYVP 161 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 + + + +I+ ++LE +P+I AGD N Q D +NP A Sbjct: 162 NSG-RGLRRLNYRINDWDPCFSDFIKKLECSKPVIVAGDLNCARQSIDIHNPQAKTEAAG 220 Query: 175 FTLEVRQSFQKLQNMG-FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 FT+E R+SF+ + D R H Y+FW + NKG R+D+ + S Sbjct: 221 FTIEERESFEVNFSRKGLVDTFRKQHPNAVAYTFWG--ENQRITNKGWRLDYFLASESIA 278 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +H + SDH+P+ + L + Sbjct: 279 DKVHDSYTLPDV----ALSDHSPIGLLLKL 304 >gi|253751487|ref|YP_003024628.1| exodeoxyribonuclease [Streptococcus suis SC84] gi|253753388|ref|YP_003026529.1| exodeoxyribonuclease [Streptococcus suis P1/7] gi|253755783|ref|YP_003028923.1| exodeoxyribonuclease [Streptococcus suis BM407] gi|251815776|emb|CAZ51378.1| exodeoxyribonuclease [Streptococcus suis SC84] gi|251818247|emb|CAZ56055.1| exodeoxyribonuclease [Streptococcus suis BM407] gi|251819634|emb|CAR45379.1| exodeoxyribonuclease [Streptococcus suis P1/7] gi|292558119|gb|ADE31120.1| exodeoxyribonuclease III [Streptococcus suis GZ1] gi|319757905|gb|ADV69847.1| exodeoxyribonuclease [Streptococcus suis JS14] Length = 275 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 60/280 (21%), Positives = 105/280 (37%), Gaps = 29/280 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + +WN++S+ A + + + + DII +QETK DK + L+ L Sbjct: 1 MKLISWNIDSLNAALTAESPRALLSRAVIDTLVTEDADIIAIQETKLSDKGPTKKHLEIL 60 Query: 54 N---------YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 + + + + P T+ Sbjct: 61 ESYFPGYANTWRSSVEPARKGYAGTLFLYKNHLTPTITFPEIGAPTTMDSEGRIITLEFD 120 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 + +Y P+ D +I ++ +L+ +P++ GDYN+ + D Sbjct: 121 DFYVTQVYTPNAGDGLKRLADRQIWDVQ--YADYLAKLDSHKPVLATGDYNVAHKEIDLA 178 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIR 222 NP FT E RQ F L GFTD R H D + Y++W + S N G R Sbjct: 179 NPASNRQSPGFTDEERQGFTNLLAKGFTDTFRHLHGDVLNAYTWWAQRSRTSKINNTGWR 238 Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSL 261 ID+ ++S + + ID+ R DHTP+++ + Sbjct: 239 IDYWLVSDRIADKVSKSDMIDSGARQ-----DHTPIVMEI 273 >gi|119475383|ref|ZP_01615736.1| exodeoxyribonuclease III [marine gamma proteobacterium HTCC2143] gi|119451586|gb|EAW32819.1| exodeoxyribonuclease III [marine gamma proteobacterium HTCC2143] Length = 255 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 56/263 (21%), Positives = 106/263 (40%), Gaps = 15/263 (5%) Query: 4 VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60 + + ++ + IR A W+ + + D IC+Q K ++ + + Y + Sbjct: 1 MRIISFCADGIREAAKKGFYDWVIDQDADFICVQNLKAQEYDLQSDVFWPQGYNPYFFDA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 K NGVAI + P I+T L D D++ R+I+A F Q + IG L P Sbjct: 61 VDKDLNGVAIYCREMPKAIMTGLGFVDFDMEGRYIQADF----QNISIGCLLAPSAAKED 116 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + + K + F S+ + G++N+ +D + +N + E + Sbjct: 117 NAAKNRKKHFFDLFQNHLSKVRNKRREFVICGNWNMTHNQNDLQDFQSNQNVPGCSPEEQ 176 Query: 181 QSFQKLQ-NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 Q +G+ DA R + + +++W + G R+D ++S S + Sbjct: 177 QWMDHTMTELGYVDAFREVNSDNDEFTWWP---EGKQGENGWRVDLQIVSSGLKSAIEYG 233 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 I + S+H P+I+ D Sbjct: 234 AIYKN----QQFSNHAPLIMDYD 252 >gi|319939581|ref|ZP_08013940.1| exodeoxyribonuclease III [Streptococcus anginosus 1_2_62CV] gi|319811170|gb|EFW07476.1| exodeoxyribonuclease III [Streptococcus anginosus 1_2_62CV] Length = 275 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 56/282 (19%), Positives = 102/282 (36%), Gaps = 29/282 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKN-------FP 46 + + +WN++S+ A + + + + DII +QETK Sbjct: 1 MKLISWNIDSLNAALTSDSARAQLSQAVLQTLVRLDADIIAIQETKLSANGPTKKHLTIL 60 Query: 47 FETLQSLN--YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 E + + + + + + P T+ Sbjct: 61 EELFPNYQLTWRSSIDPARKGYAGTMFLYKNNLTPIITFPEIGAPSTMDAEGRIITLEFD 120 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 + +Y P+ + ++ K L+ ++P++ GDYN+ D Sbjct: 121 NFFVTQVYTPNAGDGLKRLVERQVWDQK--YADYLTTLDEKKPVLATGDYNVAHNEIDLA 178 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIR 222 +P FT E R F L N GFTD R H D ++YS+W + S N G R Sbjct: 179 HPSSNRRSPGFTDEERSGFTNLLNRGFTDTFRYIHGDIPNVYSWWAQRSKTSKINNSGWR 238 Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 ID+ + S + + ID+ R DHTP+++ +++ Sbjct: 239 IDYWLTSNRIADKVTKSEMIDSGTRQ-----DHTPIVLEIEL 275 >gi|302820698|ref|XP_002992015.1| hypothetical protein SELMODRAFT_134604 [Selaginella moellendorffii] gi|300140137|gb|EFJ06864.1| hypothetical protein SELMODRAFT_134604 [Selaginella moellendorffii] Length = 558 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 64/359 (17%), Positives = 109/359 (30%), Gaps = 82/359 (22%) Query: 4 VTVATWNVNSIRARI---HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 + + ++NVN +RAR+ +L A++ + DIICLQETK + + Y Sbjct: 1 MRIVSYNVNGLRARLSPARSLRAFLDSLDADIICLQETKIRRQELTADIATPQGYESFFS 60 Query: 61 GQKS-------YNGVAILSKYQP-----------------IEIVTHLPGDDLDVQARFIE 96 ++ Y+GVA K + + GD + Sbjct: 61 CTRTVKKGRLGYSGVATFCKVECGNNVALPVAAEEGFTGLLTSARAGEGDKEFWLGSYDP 120 Query: 97 -------------------ATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF 137 + + N+Y P+ + + D K+++ + Sbjct: 121 VLTVEGFTRQELLDLDNEGRCIVTDHGHFVLFNVYGPNVGCGDAERQDFKLNFYQVLQCR 180 Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA 197 L+ +I GD NI P P D +P + + R Sbjct: 181 LESILKQGRRIIIVGDLNISPYPIDSCDPGPEFDTSPSRQWFRSLLVSEGGAFSDAFRVF 240 Query: 198 THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS------------------- 238 + Y+ W + + N G RIDH++++ S Sbjct: 241 HPERAEAYTCWSQASGAEEFNYGSRIDHVLIAGPCAGHCQSPDGSHGNSSCDGFAKCGTD 300 Query: 239 -ARI---------DTKPRGWTK------PSDHTPVIVSLD-IPEPRKKQQDSTSQNMKP 280 I DT PR SDH PVI+ L +P + + P Sbjct: 301 MCDILLEFKRAKLDTLPRWSGGRSLKLDGSDHAPVILQLKHLPSIPPHEAPQLAARFMP 359 >gi|325696280|gb|EGD38171.1| exodeoxyribonuclease [Streptococcus sanguinis SK160] Length = 322 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 55/282 (19%), Positives = 100/282 (35%), Gaps = 29/282 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDK-------NFP 46 + + +WN++S+ A + + ++ N DII +QETK Sbjct: 48 MKLISWNIDSLNAALTSDSARAQLSQAVLQTLQAENADIIAIQETKLSATGPTKKHLEIL 107 Query: 47 FETLQSLN--YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 + + + + + + P T+ Sbjct: 108 TDLFPDYENTWRSSREPARKGYAGTMFLYKKELTPTVTFPEIGAPSTMDVEGRIITLEFD 167 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 + +Y P+ D ++ L+ ++P++ GDYN+ + D Sbjct: 168 GFFVTQVYTPNAGDGLKRLDDRQVWD--AKYAEYLATLDEQKPVLATGDYNVAHKEIDLA 225 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIR 222 NP FT E R F L GFTD R H D + Y++W + S N G R Sbjct: 226 NPASNRRSPGFTDEERAGFTNLLAKGFTDTFRHLHGDIPNQYTWWAQRSKTSKINNTGWR 285 Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 ID+ + S + + ID+ R DHTP+++ +++ Sbjct: 286 IDYWLTSNRVADKVTKSDMIDSGARQ-----DHTPIVMEIEL 322 >gi|223932412|ref|ZP_03624414.1| exodeoxyribonuclease III Xth [Streptococcus suis 89/1591] gi|330832647|ref|YP_004401472.1| exodeoxyribonuclease [Streptococcus suis ST3] gi|223898866|gb|EEF65225.1| exodeoxyribonuclease III Xth [Streptococcus suis 89/1591] gi|329306870|gb|AEB81286.1| exodeoxyribonuclease [Streptococcus suis ST3] Length = 275 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 60/280 (21%), Positives = 105/280 (37%), Gaps = 29/280 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + +WN++S+ A + + + + DII +QETK DK + L+ L Sbjct: 1 MKLISWNIDSLNAALTAESPRALLSRAVIDTLVTEDADIIAIQETKLSDKGPTKKHLEIL 60 Query: 54 N---------YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 + + + + P T+ Sbjct: 61 ESYFPGYANTWRSSVEPARKGYAGTLFLYKNHLSPTITFPEIGAPTTMDSEGRIITLEFD 120 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 + +Y P+ D +I ++ +L+ +P++ GDYN+ + D Sbjct: 121 DFYVTQVYTPNAGDGLKRLADRQIWDVQ--YADYLAKLDSHKPVLATGDYNVAHKEIDLA 178 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIR 222 NP FT E RQ F L GFTD R H D + Y++W + S N G R Sbjct: 179 NPASNRQSPGFTDEERQGFTNLLAKGFTDTFRHLHGDVLNAYTWWAQRSRTSKINNTGWR 238 Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSL 261 ID+ ++S + + ID+ R DHTP+++ + Sbjct: 239 IDYWLVSDRIADKVSKSDMIDSGARQ-----DHTPIVMEI 273 >gi|251781878|ref|YP_002996180.1| putative 3'-exo-deoxyribonuclease [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|242390507|dbj|BAH80966.1| putative 3'-exo-deoxyribonuclease [Streptococcus dysgalactiae subsp. equisimilis GGS_124] gi|323126691|gb|ADX23988.1| exodeoxyribonuclease III [Streptococcus dysgalactiae subsp. equisimilis ATCC 12394] Length = 275 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 58/283 (20%), Positives = 104/283 (36%), Gaps = 31/283 (10%) Query: 4 VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + +WN++S+ A + + + + DII +QETK K + +++L Sbjct: 1 MKLISWNIDSLNAALTGESPRALLSRAVLDTLVAQDADIIAIQETKLSAKGPTKKHIETL 60 Query: 54 -NYHIETCGQKSYN---------GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 +Y + + G L K ++T Sbjct: 61 LSYFPDYLHVWRSSVEPARKGYAGTMFLYKNTLNPVITFPEIGAPTTMDAEGRMITLEFE 120 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 G+ + + L+ ++P++ GDYN+ + D Sbjct: 121 NFFVTQVYTPNAGDGLRRLEDRQIWDQKYADY---LVELDAQKPVLATGDYNVAHKEIDL 177 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221 NP FT E RQ F L GFTD R H D ++Y++W + S N G Sbjct: 178 ANPGSNRRSPGFTDEERQGFTNLLARGFTDTFRHLHGDIPNVYTWWAQRSKTSKINNTGW 237 Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 RID+ + S ++ + I + R DHTP+++ +D+ Sbjct: 238 RIDYWLTSNRLVDKINRSEMISSGERQ-----DHTPILLDIDL 275 >gi|147789500|emb|CAN69587.1| hypothetical protein VITISV_019797 [Vitis vinifera] Length = 632 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 61/359 (16%), Positives = 98/359 (27%), Gaps = 82/359 (22%) Query: 4 VTVATWNVNSIRARIHNL---AAWIKENNPDIICLQETKTEDKNFPFETLQSL------- 53 + + T+NVN +R RI ++ + DIIC+QETK + + + Sbjct: 1 MKIVTYNVNGLRPRISQFGSLLKFLSSLDADIICVQETKLSRHELTADVVMADGYESFFS 60 Query: 54 ----------NYHIETCGQKSYNGVAILSKYQPIEIVTHLPG------------------ 85 Y + + + PI G Sbjct: 61 CTRTNSKGRVGYSGVATFCRVKSAFSSTEVALPIAAEEGFTGLLEKSGGFGTGKDEIPVK 120 Query: 86 ---------------DDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISW 130 D F + N+Y P + + + K ++ Sbjct: 121 AEGLEEFAKDELLKVDSEGRCIITDHGHFADYGNWPVLFNIYGPRADSEDTERIQFKHTF 180 Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG 190 + + + + GD NI P D + F R + Sbjct: 181 FQILQKRWETLQQQGRRIFVVGDLNIAPAAIDRCDAGPDFEKNEFRRWFRSMLVECGGPF 240 Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE-------ATSL------LH 237 F D Y+ W + N G RIDHI+ S + Sbjct: 241 FDVFRAKHPDRREAYTCWSSSTGAEEFNYGSRIDHILSSGSCLHQDHCLQDRIFVTCHVK 300 Query: 238 SARIDTKPRGWT---------------KPSDHTPVIVSL-DIPEPRKKQQDSTSQNMKP 280 I T+ + W + SDH PV +SL DIP+ + S S P Sbjct: 301 ECDILTQFKRWKPGNKPRWKGGRSIKLEGSDHAPVFMSLMDIPDVAQHSTPSLSARYVP 359 >gi|324991375|gb|EGC23308.1| exodeoxyribonuclease [Streptococcus sanguinis SK353] Length = 275 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 62/283 (21%), Positives = 101/283 (35%), Gaps = 31/283 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + +WN++S+ A + + ++ N DII +QETK + L+ L Sbjct: 1 MKLISWNIDSLNAALTSDSARAQLSQAVLQTLQAENADIIAIQETKLSASGPTKKHLEIL 60 Query: 54 -----NYHIETCGQKS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 Y + Y G L K + IVT Sbjct: 61 TNLFPEYENTWRSSQEPARKGYAGTMFLYKKELTPIVTFPEIGAPSTMDVEGRIITLEFD 120 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 G+ + RL+ ++P++ GDYN+ + D Sbjct: 121 DFFVTQVYTPNAGDGLKRLD---DRQVWDAKYAEYLARLDGQKPVLATGDYNVAHKEIDL 177 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221 NP FT E R F L GFTD R H D + Y++W + S N G Sbjct: 178 ANPASNRRSPGFTDEERAGFTNLLAKGFTDTFRHLHGDIPNKYTWWAQRSKTSKINNTGW 237 Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 RID+ + S + + ID+ R DHTP+++ +++ Sbjct: 238 RIDYWLTSNRVADKVTKSDMIDSGARQ-----DHTPIVMEIEL 275 >gi|125718506|ref|YP_001035639.1| exodeoxyribonuclease, putative [Streptococcus sanguinis SK36] gi|125498423|gb|ABN45089.1| Exodeoxyribonuclease, putative [Streptococcus sanguinis SK36] Length = 322 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 57/282 (20%), Positives = 103/282 (36%), Gaps = 29/282 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + +WN++S+ A + + ++ N DII +QETK + L+ L Sbjct: 48 MKLISWNIDSLNAALTSDSARAQLSQAVLQTLQAENADIIAIQETKLSATGPTKKHLEIL 107 Query: 54 N---------YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 + + + + + P T+ Sbjct: 108 TNLFPEYENTWRSSQEPARKGYAGTMFLYKKELTPTVTFPEIGAPSTMDVEGRIITLEFD 167 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 + +Y P+ D ++ L+ ++P++ GDYN+ + D Sbjct: 168 GFFVTQVYTPNAGDGLKRLDDRQVWD--AKYAEYLATLDEQKPVLATGDYNVAHKEIDLA 225 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIR 222 NP FT E R F L GFTD R H D + Y++W + S N G R Sbjct: 226 NPASNRRSPGFTDEERAGFTNLLAKGFTDTFRHLHGDIPNQYTWWAQRSKTSKINNTGWR 285 Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 ID+ + S + + ID+ R DHTP+++ +++ Sbjct: 286 IDYWLTSNRVADKVTKSDMIDSGARQ-----DHTPIVMEIEL 322 >gi|330505628|ref|YP_004382497.1| exodeoxyribonuclease III Xth [Pseudomonas mendocina NK-01] gi|328919914|gb|AEB60745.1| exodeoxyribonuclease III Xth [Pseudomonas mendocina NK-01] Length = 254 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 68/258 (26%), Positives = 111/258 (43%), Gaps = 13/258 (5%) Query: 10 NVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG--QKSYN 66 NVN I+A L +W++ N D+ICLQ+T+ + Q Y + C S Sbjct: 2 NVNGIQAAAERGLLSWLQAQNADVICLQDTRASAFEMDDQAFQLDGYFLYACDGEVPSQG 61 Query: 67 GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDD 126 GVA+ S+ QP +++ L + D R+++A F + I L LP G + Sbjct: 62 GVALYSRLQPKAVISGLGFEMADRYGRYLQADFD----KVSIATLLLPSGR-DGDESLNQ 116 Query: 127 KISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF-TLEVRQSFQK 185 K ++ F + ++ I+ G ++ Q D N + F E + Sbjct: 117 KFKFMDDFTHYLDKQRRKRREYIYCGSLHVAHQKMDVKNWRDCQQSPGFLAPERAWMDEV 176 Query: 186 LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKP 245 + NMG+ DA+R +S+W + N G R D+ +L+P + SAR+ +P Sbjct: 177 VGNMGYVDALREVSREGDQFSWWPDNEQAEMLNLGYRFDYQLLTPGMRRSVRSARLPRQP 236 Query: 246 RGWTKPSDHTPVIVSLDI 263 R S H P+IV D Sbjct: 237 R----FSQHAPLIVDYDW 250 >gi|183233999|ref|XP_650532.2| exodeoxyribonuclease III [Entamoeba histolytica HM-1:IMSS] gi|169801308|gb|EAL45146.2| exodeoxyribonuclease III, putative [Entamoeba histolytica HM-1:IMSS] Length = 319 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 65/263 (24%), Positives = 112/263 (42%), Gaps = 18/263 (6%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN-YHIETCG 61 + +AT+NV S A + L +IKE NPDI+C+QETK +D P + + Y + Sbjct: 70 IKIATYNVASWNAAMKKGLNEFIKEENPDILCVQETKLQDGVNP--MIDGYHCYFSASTA 127 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y G AILSK +P+ I + G + + + N N + Sbjct: 128 KKGYAGTAILSKEEPLSITKKINGKENEHGRIITVEYEKFYLVNSYVMNSGQRLENLVK- 186 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + + + +R + L+ ++ +I+ GD N+ + D P+ A FT E R Sbjct: 187 -----RTTEWDKDMREHLKALQKKKNVIWCGDLNVALRWIDVAKPMTRLRCAGFTKEERA 241 Query: 182 SFQKLQ-NMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 S + + D + + Y+F+ SK G R+D+ +S + + Sbjct: 242 STNETIKELNLVDTFQVKYPKKRDFYTFFS--FKDKSKTAGWRLDYFFVSKDLVDSVT-- 297 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 +I R SDH P+I+ + Sbjct: 298 QIYR--RKEISASDHVPLIIHIK 318 >gi|238855799|ref|ZP_04646091.1| exodeoxyribonuclease III [Lactobacillus jensenii 269-3] gi|260665239|ref|ZP_05866088.1| exodeoxyribonuclease III [Lactobacillus jensenii SJ-7A-US] gi|282933520|ref|ZP_06338892.1| exodeoxyribonuclease III [Lactobacillus jensenii 208-1] gi|238831575|gb|EEQ23920.1| exodeoxyribonuclease III [Lactobacillus jensenii 269-3] gi|260560976|gb|EEX26951.1| exodeoxyribonuclease III [Lactobacillus jensenii SJ-7A-US] gi|281302366|gb|EFA94596.1| exodeoxyribonuclease III [Lactobacillus jensenii 208-1] Length = 275 Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats. Identities = 57/280 (20%), Positives = 106/280 (37%), Gaps = 25/280 (8%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTED-------KNFP 46 + + +WN++S+ A + ++ I E PDI+ +QETK Sbjct: 1 MLLISWNIDSLNAALTSDSARAQKTRHVLTQIAEKEPDILAIQETKLRATGPTKKHAEIL 60 Query: 47 FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 E +Y + + + G A + + + I + Sbjct: 61 QEMFPDYDYVWRSSEEPARKGYAGTMYLYKKSLKPEVSYPKIGAPDTMDFEGRIITLEFP 120 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 + N K + Q L++++P++ +GDYN+ + D +P Sbjct: 121 EYFVTQVYTPNAGGELKRLSDRQGWDKKYIEYLQELDVQKPVLASGDYNVAHEEIDLKHP 180 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYY-ADSWSKNKGIRID 224 + A FT E R F +L GFTD+ R H +YS+W + + N G RID Sbjct: 181 ENNHHSAGFTDEERADFTELLAAGFTDSFRKIHGNIPEVYSWWAQRIRTAKANNSGWRID 240 Query: 225 HIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 + + S + + +DT R DH P+++ +++ Sbjct: 241 YWLTSNRIADKIKKSEMMDTGERA-----DHCPIVLEIEL 275 >gi|290986733|ref|XP_002676078.1| predicted protein [Naegleria gruberi] gi|284089678|gb|EFC43334.1| predicted protein [Naegleria gruberi] Length = 340 Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 58/268 (21%), Positives = 105/268 (39%), Gaps = 15/268 (5%) Query: 5 TVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTEDKNFPFET----LQSLNYH 56 +WNVN I A L +++ P +CLQETK + E ++ H Sbjct: 76 KFISWNVNGISAVFRKEPNYLKMLVEKEEPTCLCLQETKLSEDVKLSEMAQYKFKNYIGH 135 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 T + + V ++ + T T+ + + N Y P+ Sbjct: 136 FNTSRARKGYSGTACFVLKHGPKVLNVKFGIGKDKHDLEGRTITVEYEDFYLVNTYCPNS 195 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + + + L ++LE ++P+I+ GD N+ D ++P+ FT Sbjct: 196 GQ-NLDRLEYRTKEWDVDLLKYFEKLEKKKPIIWGGDLNVAISEMDIHDPLTLSKSPGFT 254 Query: 177 LEVRQSFQ--KLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 LE RQS + F D+ R + Y+++ Y D + KG RID+ + S Sbjct: 255 LEERQSSPLVTKASPPFIDSFRYKNPYKKQYTYYGYINDMRLQKKGWRIDYFVCSNSLKD 314 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + ++ I + G SDH P+ + ++ Sbjct: 315 KIVNSYILEEYFG----SDHLPIGLIIN 338 >gi|322411221|gb|EFY02129.1| exodeoxyribonuclease III [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 275 Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 59/283 (20%), Positives = 104/283 (36%), Gaps = 31/283 (10%) Query: 4 VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + +WN++S+ A + + + + DII +QETK K + ++SL Sbjct: 1 MKLISWNIDSLNAALTGESPRALLSRTVLDTLVAQDADIIAIQETKLSAKGPTKKHVESL 60 Query: 54 -NYHIETCGQKSYN---------GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 +Y + + G L K ++T Sbjct: 61 LSYFPDYLHVWRSSVEPARKGYAGTMFLYKNTLNPVITFPEIGAPTTMDAEGRMITLEFE 120 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 G+ + + L+ ++P++ GDYN+ + D Sbjct: 121 DFFVTQVYTPNAGDGLRRLEDRQIWDQKYADY---LAELDAQKPVLATGDYNVAHKEIDL 177 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221 NP FT E RQ F L GFTD R H D ++Y++W + S N G Sbjct: 178 ANPGSNRRSPGFTDEERQGFTNLLAKGFTDTFRHLHGDIPNVYTWWAQRSKTSKINNTGW 237 Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 RID+ + S ++ + I + R DHTP+++ +D+ Sbjct: 238 RIDYWLTSNRLVDKINRSEMISSGERQ-----DHTPILLDIDL 275 >gi|319745559|gb|EFV97861.1| exodeoxyribonuclease III [Streptococcus agalactiae ATCC 13813] Length = 275 Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 66/282 (23%), Positives = 108/282 (38%), Gaps = 29/282 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + +WN++S+ A + + + + DII +QETK K + L+ L Sbjct: 1 MKLISWNIDSLNAALTSESTRALMSRQVIDTLVAEDADIIAIQETKLSAKGPTKKHLEVL 60 Query: 54 N-YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL------ 106 Y E + Y + + + T N + Sbjct: 61 ETYFPEYDLVWRSSVEPARKGYAGTMFLYRKGLNPIVSFPEIDAPTTMDNEGRIITLELE 120 Query: 107 --RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 I +Y P+ D +I I L+ ++P++ GDYN+ + D Sbjct: 121 NCYITQVYTPNAGDALKRLGDRQIWDI--KYAEYLATLDSQKPVLATGDYNVAHKEIDLA 178 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIR 222 NP A FT E RQ F L GFTD R H D ++YS+W + S N G R Sbjct: 179 NPSSNRRSAGFTDEERQGFTNLLAKGFTDTFRYLHGDVPNVYSWWAQRSRTSKINNTGWR 238 Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 ID+ + S + + I + R DHTP+I+ +++ Sbjct: 239 IDYWLTSNRVADKITKSEMIHSGDRQ-----DHTPIILEIEL 275 >gi|322388347|ref|ZP_08061951.1| exodeoxyribonuclease [Streptococcus infantis ATCC 700779] gi|321141019|gb|EFX36520.1| exodeoxyribonuclease [Streptococcus infantis ATCC 700779] Length = 340 Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 60/284 (21%), Positives = 102/284 (35%), Gaps = 31/284 (10%) Query: 2 SVVTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTE---DKNFPFE 48 +++ + +WN++S+ A + ++ + N DII +QETK E Sbjct: 64 NIMKLISWNIDSLNAALTSDSARAKLSQDVLQTLVAENADIIAIQETKLSATGPTKKHLE 123 Query: 49 TLQSL--NYHIETCGQKS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI 101 L+ L Y + Y G L K + ++ Sbjct: 124 VLEELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAPSTMDSEGRIITLE 183 Query: 102 NTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161 G+ + + +L+ ++P++ GDYN+ + Sbjct: 184 FDTFFVTQVYTPNAGDGLKRLEERQVWDVKYAEY---LAQLDKQKPVLATGDYNVAHKEI 240 Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNK 219 D NP FT E R+ F L GFTD R H D Y++W + S N Sbjct: 241 DLANPASNRRSPGFTDEEREGFTNLLAKGFTDTFRHIHGDVPERYTWWAQRSKTSKINNT 300 Query: 220 GIRIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLD 262 G RID+ + S + + ID+ R DHTP+++ +D Sbjct: 301 GWRIDYWLTSNRVADKVSKSDMIDSGARQ-----DHTPIVMEID 339 >gi|254716967|ref|ZP_05178778.1| Exodeoxyribonuclease III [Brucella ceti M13/05/1] Length = 191 Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 102/185 (55%), Positives = 133/185 (71%) Query: 79 IVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFA 138 I LPGDD D QARFIE ++ +T +R+ +LYLP+GNPI + K+ K+SW++R +A Sbjct: 7 INKGLPGDDSDEQARFIEGIYSTDTGVVRVVSLYLPNGNPIDTEKFPYKLSWMQRLENWA 66 Query: 139 SQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT 198 +RL LEEPL+ AGDYN+IP+P D NP W DA F + RQ+F++L+N+GFTDAIRA+ Sbjct: 67 KKRLTLEEPLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAFRRLENLGFTDAIRAS 126 Query: 199 HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVI 258 D +YSFWDY A +W KN GIRIDH+MLSPEAT+ SA I+ R W KPSDH PV Sbjct: 127 TDESGVYSFWDYQAGAWQKNNGIRIDHLMLSPEATNRFISANIEKHVRAWEKPSDHVPVT 186 Query: 259 VSLDI 263 V+L + Sbjct: 187 VTLAV 191 >gi|218189227|gb|EEC71654.1| hypothetical protein OsI_04097 [Oryza sativa Indica Group] Length = 321 Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats. Identities = 65/282 (23%), Positives = 113/282 (40%), Gaps = 33/282 (11%) Query: 4 VTVATWNVNSIRARI--HNL--AAWIKENNPDIICLQETKTED----------------- 42 + + +WN+N + + + N D++CLQET E Sbjct: 51 MKILSWNINGLHDVVTTKGFSARDLAQRENFDVLCLQETHLEASLGVSAIRLLIYTEKDV 110 Query: 43 KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN 102 + F +Y + + Y+G A++S+ +PI + + + D + R I F Sbjct: 111 EKFKNLIADYDSYWSCSVSRLGYSGTAVISRVKPISVQYGIGIREHDHEGRVITLEFDG- 169 Query: 103 TQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD 162 + N Y+P+ + +++ + LE +P+I AGD N Q D Sbjct: 170 ---FYLVNAYVPNSGRFLRR-LNYRVNNWDPCFSNYVKILEKSKPVIVAGDLNCARQSID 225 Query: 163 CYNPIIWENDACFTLEVRQSFQKLQNMG-FTDAIRATHDTHHLYSFWDYYADSWSKNKGI 221 +NP A FT+E R+SF+ + D R H Y+FW + NKG Sbjct: 226 IHNPPAKTKSAGFTIEERESFETNFSSKGLVDTFRKQHPNAVGYTFWG--ENQRITNKGW 283 Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 R+D+ + S T +H + I SDH+P+ + L + Sbjct: 284 RLDYFLASESITDKVHDSYILPDV----SFSDHSPIGLVLKL 321 >gi|77406522|ref|ZP_00783574.1| exodeoxyribonuclease III [Streptococcus agalactiae H36B] gi|77411367|ref|ZP_00787714.1| exodeoxyribonuclease III [Streptococcus agalactiae CJB111] gi|77162540|gb|EAO73504.1| exodeoxyribonuclease III [Streptococcus agalactiae CJB111] gi|77174861|gb|EAO77678.1| exodeoxyribonuclease III [Streptococcus agalactiae H36B] Length = 275 Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats. Identities = 66/282 (23%), Positives = 108/282 (38%), Gaps = 29/282 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + +WN++S+ A + + + + DII +QETK K + L+ L Sbjct: 1 MKLISWNIDSLNAALTSESTRALMSRQVIDTLVAEDADIIAIQETKLSAKGPTKKHLEVL 60 Query: 54 N-YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL------ 106 Y E + Y + + + T N + Sbjct: 61 ETYFPEYDLVWRSSVEPARKGYAGTMFLYRKGLNPIVSFPEIDAPTTMDNEGRIITLELE 120 Query: 107 --RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 I +Y P+ D +I I L+ ++P++ GDYN+ + D Sbjct: 121 NCYITQVYTPNAGDGLKRLADRQIWDI--KYAEYLATLDSQKPVLATGDYNVAHKEIDLA 178 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIR 222 NP A FT E RQ F L GFTD R H D ++YS+W + S N G R Sbjct: 179 NPSSNRRSAGFTDEERQGFTNLLAKGFTDTFRYLHGDVPNVYSWWAQRSRTSKINNTGWR 238 Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 ID+ + S + + I + R DHTP+I+ +++ Sbjct: 239 IDYWLTSNRVADKITKSEMIHSGDRQ-----DHTPIILEIEL 275 >gi|227494748|ref|ZP_03925064.1| possible exodeoxyribonuclease III [Actinomyces coleocanis DSM 15436] gi|226831748|gb|EEH64131.1| possible exodeoxyribonuclease III [Actinomyces coleocanis DSM 15436] Length = 273 Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats. Identities = 62/269 (23%), Positives = 108/269 (40%), Gaps = 14/269 (5%) Query: 6 VATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDK---NFPFETLQSLNYHIETCG 61 + T NVN IRA +A+ + E PD++ LQE + DK + E + +NY E G Sbjct: 5 LMTVNVNGIRAAYKRDMASVLAETAPDVLALQEVRANDKILADLMGEDWEMVNYSCEIKG 64 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDD------LDVQARFIEATFTINTQTLRIGNLYLPH 115 + + S + + + G R++E +T+ + + YL Sbjct: 65 RAGVAVLVRRSSHVELLADSARFGAPEGGDKVPVDTGRWLEVDVVDGDRTVTVISAYLHS 124 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND-AC 174 G + + K D K + +K ++ + + + GD NI+ D N N A Sbjct: 125 GE-LGTEKMDQKYAHLKLVTERMAEIVASGKHAVVVGDLNIVRSEKDIKNWKGNHNKSAG 183 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATH--DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 E + G+TD R H + Y++W + S+ + G RID+ + + E Sbjct: 184 VMDEEIAYVDGWMSSGWTDISRQLHGAEQQGPYTWWSWRGKSFDNDAGWRIDYQLATAEL 243 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + S +D + SDH P+ V Sbjct: 244 AATATSCVVDRADAYEKRFSDHAPLRVHY 272 >gi|212274573|ref|NP_001130149.1| hypothetical protein LOC100191243 [Zea mays] gi|194688404|gb|ACF78286.1| unknown [Zea mays] Length = 323 Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats. Identities = 69/270 (25%), Positives = 118/270 (43%), Gaps = 19/270 (7%) Query: 2 SVVTVATWNVNSIRARIH-NL--AAWIKENNPDIICLQETKTEDKNFPF--ETLQSLNYH 56 + + + +WNVN ++A + + N D++CLQET E++N + +Y Sbjct: 65 NSMKILSWNVNGLQAIVQSGFSADELVARENFDVLCLQETHLEERNVDLFKNLVHEYDYT 124 Query: 57 IETCGQKS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 +C Y+G A++S+ QPI + L + D + R I F + N Y+P Sbjct: 125 CWSCSVARLGYSGTAVISRVQPISVQYGLGIPEHDQEGRLITLEFD----DFYLVNAYVP 180 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 + + + +I+ ++LE +P+I AGD N Q D +NP A Sbjct: 181 NSG-RGLRRLNYRINDWDPCFSDFIKKLECSKPVIVAGDLNCARQSIDIHNPQAKTEAAG 239 Query: 175 FTLEVRQSFQKLQNMG-FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 FT+E R+SF+ + D R H Y+FW + NKG R+D+ + S Sbjct: 240 FTIEERESFEVNFSRKGLVDTFRKQHPNAVAYTFWG--ENQRITNKGWRLDYFLASESIA 297 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +H + SDH+P+ + L + Sbjct: 298 DKVHDSYTLPDV----ALSDHSPIGLLLKL 323 >gi|192360058|ref|YP_001983982.1| catabolite repression control protein [Cellvibrio japonicus Ueda107] gi|190686223|gb|ACE83901.1| catabolite repression control protein [Cellvibrio japonicus Ueda107] Length = 256 Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats. Identities = 59/264 (22%), Positives = 104/264 (39%), Gaps = 14/264 (5%) Query: 4 VTVATWNVNSI-RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + V + +V+ I +A L W+ + D ICLQ+ + ++ + Y+ Sbjct: 1 MRVISLSVDGIFQAAQRGLYTWLASQDADFICLQDLRALERELEKPEFELKGYNAYFFDS 60 Query: 62 -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 K YNGVAI ++ QP ++ ++ + L IG+L P + Sbjct: 61 GTKHYNGVAIYTRLQPKALIYG---LGFASGVDMEGRYLQVDFEQLSIGSLLAPSASSEL 117 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + KI + F + +F G++ + P D N ++++ F R Sbjct: 118 -ESQEVKIKFFDDFQAHLDKITRKRREYVFCGNWQMAHTPKDVSNSTENQHNSGFLPHER 176 Query: 181 QSFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 Q +L N G+ DA R + YS+W + + + G R D ++S + A Sbjct: 177 QWLSQLFNQIGYVDAFRKVNKDADEYSWWP--SGAKGEGDGWRTDFQVVSNSLGHKVEYA 234 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 I + S H PVI+ DI Sbjct: 235 TIYK----TQQFSSHLPVIIDYDI 254 >gi|25011656|ref|NP_736051.1| hypothetical protein gbs1616 [Streptococcus agalactiae NEM316] gi|77413444|ref|ZP_00789636.1| exodeoxyribonuclease III [Streptococcus agalactiae 515] gi|24413196|emb|CAD47275.1| Unknown [Streptococcus agalactiae NEM316] gi|77160538|gb|EAO71657.1| exodeoxyribonuclease III [Streptococcus agalactiae 515] Length = 275 Score = 126 bits (316), Expect = 3e-27, Method: Composition-based stats. Identities = 66/282 (23%), Positives = 108/282 (38%), Gaps = 29/282 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + +WN++S+ A + + + + DII +QETK K + L+ L Sbjct: 1 MKLISWNIDSLNAALTSESTRALMSRQVIDTLVAEDADIIAIQETKLSAKGPTKKHLEVL 60 Query: 54 N-YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL------ 106 Y E + Y + + + T N + Sbjct: 61 ETYFPEYDLVWRSSVEPARKGYAGTMFLYRKGLNPIVSFPEIDAPTTMDNEGRIITLELE 120 Query: 107 --RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 I +Y P+ D +I I L+ ++P++ GDYN+ + D Sbjct: 121 NCYITQVYTPNAGDGLKRLGDRQIWDI--KYAEYLATLDSQKPVLATGDYNVAHKEIDLA 178 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIR 222 NP A FT E RQ F L GFTD R H D ++YS+W + S N G R Sbjct: 179 NPSSNRRSAGFTDEERQGFTNLLAKGFTDTFRYLHGDVPNVYSWWAQRSRTSKINNTGWR 238 Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 ID+ + S + + I + R DHTP+I+ +++ Sbjct: 239 IDYWLTSNRVADKITKSEMIHSGDRQ-----DHTPIILEIEL 275 >gi|170016857|ref|YP_001727776.1| exodeoxyribonuclease III [Leuconostoc citreum KM20] gi|169803714|gb|ACA82332.1| Exodeoxyribonuclease III [Leuconostoc citreum KM20] Length = 274 Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats. Identities = 64/281 (22%), Positives = 112/281 (39%), Gaps = 30/281 (10%) Query: 4 VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTED-------KNFP 46 + + +WN++SI A + + + I PDI +QETK + Sbjct: 1 MQLISWNIDSINAAVEHKSARGEMTWDVLNQIAARQPDIFAIQETKLKAVGLTKKQAQTI 60 Query: 47 FETLQSLN-YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT 105 + + Y + + Y+G +LS+ +P+ + + D+ T Sbjct: 61 TDLFPDYHIYTNSSTARSGYSGTMMLSRQEPLSVDYPIINAPGDMDLEGRIITLEFENYY 120 Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165 + ++ R Q L+ ++P+IF+GD N+ + D N Sbjct: 121 VSTVYTPNSGSGLARL----EERGAWDDAYRAYIQALDAQKPVIFSGDMNVAHEEIDLKN 176 Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYAD-SWSKNKGIRI 223 P N A FT + R+ F L GFTD +R+ + LY++W + S N G RI Sbjct: 177 PKTNHNSAGFTDQEREKFSALLRAGFTDTMRSQYPEQTGLYTWWAQISKTSKINNSGWRI 236 Query: 224 DHIMLSPEATSLLH-SARIDTKPRGWTKPSDHTPVIVSLDI 263 D+ ++S + +A IDT R DH P+ + + I Sbjct: 237 DYYLVSERLAPKVKTTAVIDTGLRQ-----DHAPITLEITI 272 >gi|148675569|gb|EDL07516.1| apurinic/apyrimidinic endonuclease 2, isoform CRA_d [Mus musculus] Length = 530 Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats. Identities = 57/343 (16%), Positives = 101/343 (29%), Gaps = 70/343 (20%) Query: 2 SVVTVATWNVNSIRARIHNLA------------AWIKENNPDIICLQETKTEDKNFPFET 49 ++ V +WN+N IR+ + LA + E + DI+CLQETK Sbjct: 7 KMLRVVSWNINGIRSPLQGLACQEPSSCPTALRRVLDELDADIVCLQETKVTRDVLTEPL 66 Query: 50 LQSLNYHIETCGQKSYNGVAILSKYQP-------------------------IEIVTHLP 84 Y+ +S +G + S P + Sbjct: 67 AIVEGYNSYFSFSRSRSGYSECSCPSPGVATFCKDSATPVAAEEGLSGVFATLNGDIGCY 126 Query: 85 GDDLDVQA---------------RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKIS 129 G+ + + T +TL + N+Y PH +P + K+ Sbjct: 127 GNMDEFTQEELRVLDSEGRALLTQHKIRTLEGKEKTLTLINVYCPHADPGKPERLTFKMR 186 Query: 130 WIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY-----------NPIIWENDACFTLE 178 + + A L +I GD N +P D W + Sbjct: 187 FYRLLQMRAEALLAAGSHVIILGDLNTAHRPIDHCDASSLECFEEDPGRKWMDGLLSNPG 246 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT-SLLH 237 M + ++ W + + N G R+D+++ Sbjct: 247 DEAGPHIGLFMDSYRYL--HPKQQRAFTCWSVVSGARHLNYGSRLDYVLGDRALVIDTFQ 304 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 ++ + + G SDH PV L++ KQ + P Sbjct: 305 ASFLLPEVMG----SDHCPVGAVLNVSCVPAKQCPALCTRFLP 343 >gi|302762180|ref|XP_002964512.1| hypothetical protein SELMODRAFT_81439 [Selaginella moellendorffii] gi|300168241|gb|EFJ34845.1| hypothetical protein SELMODRAFT_81439 [Selaginella moellendorffii] Length = 540 Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats. Identities = 65/359 (18%), Positives = 109/359 (30%), Gaps = 82/359 (22%) Query: 4 VTVATWNVNSIRARI---HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 + + ++NVN +RAR+ +L A++ + DIICLQETK + + Y Sbjct: 1 MRIVSYNVNGLRARLSPARSLRAFLDSLDADIICLQETKIRRQELTADIATPQGYESFIS 60 Query: 61 GQKS-------YNGVAILSKYQP-----------------IEIVTHLPGDDLDVQARFIE 96 ++ Y+GVA K + + GD + Sbjct: 61 CTRTVKKGRLGYSGVATFCKVECGNNVALPVAAEEGFTGLLTSARAGEGDKEFWLGSYDP 120 Query: 97 -------------------ATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF 137 + + N+Y P+ + + D K+++ K Sbjct: 121 VLTVEGFTRQELLDLDNEGRCIVTDHGHFVLFNIYGPNVGCGDAERQDFKLNFYKVLQCR 180 Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA 197 L+ +I GD NI P P D +P + + R Sbjct: 181 LESILKQGRRIIIVGDLNISPYPIDSCDPGPEFDTSPSRQWFRSLLVSEGGAFSDAFRVF 240 Query: 198 THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS------------------- 238 + Y+ W + + N G RIDH++++ S Sbjct: 241 HPERAEAYTCWSQASGAEEFNYGSRIDHVLIAGPCAGHCQSPDGSHDNSSCDGFAKCGTD 300 Query: 239 -ARI---------DTKPRGWTK------PSDHTPVIVSLD-IPEPRKKQQDSTSQNMKP 280 I DT PR SDH PVI+ L +P + + P Sbjct: 301 MCDILLEFKRAKLDTLPRWSGGRSLKLDGSDHAPVILQLKHLPSIPPHEAPQLAARFMP 359 >gi|26354044|dbj|BAC40652.1| unnamed protein product [Mus musculus] gi|123223480|emb|CAM21422.1| apurinic/apyrimidinic endonuclease 2 [Mus musculus] Length = 523 Score = 126 bits (315), Expect = 4e-27, Method: Composition-based stats. Identities = 57/342 (16%), Positives = 101/342 (29%), Gaps = 70/342 (20%) Query: 3 VVTVATWNVNSIRARIHNLA------------AWIKENNPDIICLQETKTEDKNFPFETL 50 ++ V +WN+N IR+ + LA + E + DI+CLQETK Sbjct: 1 MLRVVSWNINGIRSPLQGLACQEPSSCPTALRRVLDELDADIVCLQETKVTRDVLTEPLA 60 Query: 51 QSLNYHIETCGQKSYNGVAILSKYQP-------------------------IEIVTHLPG 85 Y+ +S +G + S P + G Sbjct: 61 IVEGYNSYFSFSRSRSGYSECSCPSPGVATFCKDSATPVAAEEGLSGVFATLNGDIGCYG 120 Query: 86 DDLDVQA---------------RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISW 130 + + + T +TL + N+Y PH +P + K+ + Sbjct: 121 NMDEFTQEELRVLDSEGRALLTQHKIRTLEGKEKTLTLINVYCPHADPGKPERLTFKMRF 180 Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY-----------NPIIWENDACFTLEV 179 + A L +I GD N +P D W + Sbjct: 181 YRLLQMRAEALLAAGSHVIILGDLNTAHRPIDHCDASSLECFEEDPGRKWMDGLLSNPGD 240 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT-SLLHS 238 M + ++ W + + N G R+D+++ + Sbjct: 241 EAGPHIGLFMDSYRYL--HPKQQRAFTCWSVVSGARHLNYGSRLDYVLGDRALVIDTFQA 298 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 + + + G SDH PV L++ KQ + P Sbjct: 299 SFLLPEVMG----SDHCPVGAVLNVSCVPAKQCPALCTRFLP 336 >gi|315221911|ref|ZP_07863822.1| exodeoxyribonuclease III [Streptococcus anginosus F0211] gi|315188877|gb|EFU22581.1| exodeoxyribonuclease III [Streptococcus anginosus F0211] Length = 275 Score = 126 bits (315), Expect = 5e-27, Method: Composition-based stats. Identities = 58/282 (20%), Positives = 102/282 (36%), Gaps = 29/282 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDK-------NFP 46 + + +WN++S+ A + + + + DII +QETK Sbjct: 1 MKLISWNIDSLNAALTSDSARAQLSQAVLQTLVRLDADIIAIQETKLSANGPTKKHLKVL 60 Query: 47 FETLQSLN--YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 E + + + + + P T+ Sbjct: 61 DELFPHYETTWRSSIEPARKGYAGTMFLYKENLSPKITFPEIGAPSTMDSEGRIITLEFD 120 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 + +Y P+ D +I + L++E+P++ GDYN+ D Sbjct: 121 NFFVTQVYTPNAGDGLKRLEDRQIWD--KKYADYLTALDIEKPVLATGDYNVAHNEIDLA 178 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIR 222 +P FT E R F L N GFTD R H D ++YS+W + S N G R Sbjct: 179 HPSSNRRSPGFTDEERSGFTNLLNRGFTDTFRYIHGDIPNVYSWWAQRSKTSKINNSGWR 238 Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 ID+ + S + + ID+ R DHTP+++ +++ Sbjct: 239 IDYWLTSNRIADKVTKSEMIDSGTRQ-----DHTPIVLEIEL 275 >gi|296110636|ref|YP_003621017.1| exodeoxyribonuclease A [Leuconostoc kimchii IMSNU 11154] gi|295832167|gb|ADG40048.1| exodeoxyribonuclease A [Leuconostoc kimchii IMSNU 11154] Length = 272 Score = 126 bits (315), Expect = 5e-27, Method: Composition-based stats. Identities = 65/281 (23%), Positives = 115/281 (40%), Gaps = 30/281 (10%) Query: 4 VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPF------ 47 + + +WN++SI A I + + I PDI +QETK + Sbjct: 1 MQLISWNIDSINAAIQHQSARGEMTWDVLNKIAARKPDIFAIQETKLKPTGLTKKQAAAL 60 Query: 48 -ETLQSLNYHIETCG-QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT 105 + + ++ + + Y+G LS+ +P+E+ P T+ + Sbjct: 61 SDLFPDYHIYVNSSTARPGYSGTMFLSRNEPLEVT--FPKISAPDTMDIEGRIITLEFED 118 Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165 + +Y P+ + D R Q L+ ++P+IF+GD N+ Q D N Sbjct: 119 FYVSTVYTPNSGSGLARLDDRG--AWDDAYRSYLQGLDNKKPVIFSGDMNVAHQEIDLKN 176 Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYAD-SWSKNKGIRI 223 + A FT R+ F L GFTD +R + +Y++W + S N G RI Sbjct: 177 FKTNHHSAGFTDPEREKFSALLEAGFTDTLRMKNPDTPGIYTWWAQISKTSKINNSGWRI 236 Query: 224 DHIMLSPEATSLLHSA-RIDTKPRGWTKPSDHTPVIVSLDI 263 D+ ++S + + + IDT R DH P+ + ++I Sbjct: 237 DYYLVSNRLAAKVSDSHVIDTGLRQ-----DHAPIALEINI 272 >gi|282897120|ref|ZP_06305122.1| Exodeoxyribonuclease III xth [Raphidiopsis brookii D9] gi|281197772|gb|EFA72666.1| Exodeoxyribonuclease III xth [Raphidiopsis brookii D9] Length = 221 Score = 126 bits (315), Expect = 5e-27, Method: Composition-based stats. Identities = 65/198 (32%), Positives = 108/198 (54%), Gaps = 2/198 (1%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSIR R+ + +W+ ENN D++CLQETK D++FP + YH GQK Sbjct: 1 MKIATWNVNSIRTRLEQVISWLGENNVDVLCLQETKVIDRDFPLTVFHDVGYHTYIYGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT--QTLRIGNLYLPHGNPITS 121 +YNGVA++S+ + T +++ + + I +RI NLY+P+G+ + S Sbjct: 61 AYNGVALISRQPMKSVSTGFCQVLENLEPEWDDQKRVITGIVDEVRIINLYVPNGSAVGS 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 KY K+ W+ + L+ +I GD+NI + D Y + +N +L R+ Sbjct: 121 EKYQYKLQWLAVLKTYLEVLLKSNSHIIMCGDFNIALEDIDIYKQVDTKNQIMASLPERE 180 Query: 182 SFQKLQNMGFTDAIRATH 199 + +++ N+GF D R + Sbjct: 181 ALREILNLGFGDGFRKFN 198 >gi|22537705|ref|NP_688556.1| exodeoxyribonuclease [Streptococcus agalactiae 2603V/R] gi|76788417|ref|YP_330186.1| exodeoxyribonuclease III [Streptococcus agalactiae A909] gi|76799526|ref|ZP_00781659.1| exodeoxyribonuclease III [Streptococcus agalactiae 18RS21] gi|77408314|ref|ZP_00785056.1| exodeoxyribonuclease III [Streptococcus agalactiae COH1] gi|22534594|gb|AAN00429.1|AE014263_8 exodeoxyribonuclease [Streptococcus agalactiae 2603V/R] gi|76563474|gb|ABA46058.1| exodeoxyribonuclease III [Streptococcus agalactiae A909] gi|76585123|gb|EAO61748.1| exodeoxyribonuclease III [Streptococcus agalactiae 18RS21] gi|77173077|gb|EAO76204.1| exodeoxyribonuclease III [Streptococcus agalactiae COH1] Length = 275 Score = 126 bits (315), Expect = 5e-27, Method: Composition-based stats. Identities = 62/280 (22%), Positives = 102/280 (36%), Gaps = 25/280 (8%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + +WN++S+ A + + + + DII +QETK K + L+ L Sbjct: 1 MKLISWNIDSLNAALTSESTRALMSRQVIDTLVAEDADIIAIQETKLSAKGPTKKHLEVL 60 Query: 54 N-YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL------ 106 Y E + Y + + + T N + Sbjct: 61 ETYFPEYDLVWRSSVEPARKGYAGTMFLYRKGLNPIVSFPEIDAPTTMDNEGRIITLELE 120 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 + N K L+ ++P++ GDYN+ + D NP Sbjct: 121 NCYITQVYTPNAGDGLKRLADRQIWDIKYAEYLATLDSQKPVLATGDYNVAHKEIDLANP 180 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIRID 224 A FT E RQ F L GFTD R H D ++YS+W + S N G RID Sbjct: 181 SSNRRSAGFTAEERQGFTNLLAKGFTDTFRYLHGDVPNVYSWWAQRSRTSKINNTGWRID 240 Query: 225 HIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 + + S + + I + R DHTP+I+ +++ Sbjct: 241 YWLTSNRVADKITKSEMIHSGDRQ-----DHTPIILEIEL 275 >gi|325845494|ref|ZP_08168785.1| exodeoxyribonuclease III [Turicibacter sp. HGF1] gi|325488513|gb|EGC90931.1| exodeoxyribonuclease III [Turicibacter sp. HGF1] Length = 215 Score = 125 bits (314), Expect = 6e-27, Method: Composition-based stats. Identities = 57/220 (25%), Positives = 100/220 (45%), Gaps = 9/220 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + +++ PD +C+QETK ++ + L + + Sbjct: 1 MKFISWNVNGLRACVKKGFLDFVEAEQPDFLCVQETKLQEGQIDLQ-LDGYYQYWNYAVK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K++P+++ L + D + R I + + +Y P+ + Sbjct: 60 KGYSGTAIFTKHEPLQVTYGLNIAEHDQEGRVITLEY----NDFYLVTVYTPNSQNELAR 115 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 D + R L++ +P+I GD N+ Q D NP +A FT+E R Sbjct: 116 L--DYRLTWEEAFRNYLIGLDVLKPVIVCGDLNVAHQQIDLKNPKTNTKNAGFTIEERNE 173 Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGI 221 KL N GF D R + + YS+W Y A + +K + + Sbjct: 174 MTKLLNSGFIDTFRYFYPTKENCYSWWSYRAGARAKKRWM 213 >gi|227432019|ref|ZP_03914038.1| exodeoxyribonuclease III [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] gi|227352217|gb|EEJ42424.1| exodeoxyribonuclease III [Leuconostoc mesenteroides subsp. cremoris ATCC 19254] Length = 285 Score = 125 bits (313), Expect = 7e-27, Method: Composition-based stats. Identities = 67/281 (23%), Positives = 115/281 (40%), Gaps = 30/281 (10%) Query: 4 VTVATWNVNSIRARIHNL-----AAW-----IKENNPDIICLQETKTEDKNFPF------ 47 + +WN++SI A + + W I PD+ +QETK + Sbjct: 14 LKFISWNIDSINAAVEHKSVRGEMTWSTLNEIATIRPDVFAIQETKLKSTGLTKKQATAI 73 Query: 48 -ETLQSLNYHIETCG-QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT 105 E + ++ + + Y+G +LSK +PI++ G + T T Sbjct: 74 AELFPEYHLYVNSSTARSGYSGTMVLSKVEPIQVEYPTIGAPGPMDLEGRIITLEFPTFF 133 Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165 L + I + R +RL+ +P+IF+GD N+ Q D N Sbjct: 134 LSTVYTPNSGSSLIRLP----ERGEWDDKYREYIKRLDATKPVIFSGDMNVAHQEIDLKN 189 Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYAD-SWSKNKGIRI 223 P + A FT + R+ F L + GFTD R+ + +Y++W + S N G RI Sbjct: 190 PKPNRHSAGFTDQEREKFSALLDAGFTDTFRSLNPDTPSVYTWWAQISKTSKINNSGWRI 249 Query: 224 DHIMLSPEATSLLH-SARIDTKPRGWTKPSDHTPVIVSLDI 263 D+ ++S + S IDT R DH P+++ +++ Sbjct: 250 DYYLVSDRIAENVTESCVIDTGARQ-----DHAPILLEINV 285 >gi|307596055|ref|YP_003902372.1| exodeoxyribonuclease III Xth [Vulcanisaeta distributa DSM 14429] gi|307551256|gb|ADN51321.1| exodeoxyribonuclease III Xth [Vulcanisaeta distributa DSM 14429] Length = 246 Score = 125 bits (313), Expect = 8e-27, Method: Composition-based stats. Identities = 62/262 (23%), Positives = 108/262 (41%), Gaps = 22/262 (8%) Query: 4 VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + +WNVN +R+ R +L + N D++ LQE ++ + P T+ L Y Sbjct: 1 MRIVSWNVNGLRSIMRKGSLDRLLSMGNYDVVLLQEIRSS-GDVPL-TIMGLGYEAYPFP 58 Query: 62 --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y GV L+K +PI ++ L + D + R I + + + G+ + Sbjct: 59 AERKGYAGVMTLTKVKPISVIKGLGIKEFDAEGRVITVE---FNEFYVVNAYFPRAGDDL 115 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + + L +P+I GD+NI D + E T E Sbjct: 116 SRLGFKISFCGAIEKF---LNELRSRKPVIVCGDFNIARDRLD--SSFWDEKHPGLTPEE 170 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R +L GF DA R H ++++ Y + +RID+ M+S E + A Sbjct: 171 RAWLSQLIKDGFIDAFRELHPNARVFTWRSYKERWRA----MRIDYCMVSEELRGKVIKA 226 Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261 + + G SDH PV++ + Sbjct: 227 EVLSDVEG----SDHVPVMIEI 244 >gi|312866373|ref|ZP_07726591.1| exodeoxyribonuclease III [Streptococcus downei F0415] gi|311098067|gb|EFQ56293.1| exodeoxyribonuclease III [Streptococcus downei F0415] Length = 276 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 61/284 (21%), Positives = 104/284 (36%), Gaps = 32/284 (11%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDK---NFPFETL 50 + + +WN++S+ A + + + E + DII +QETK K L Sbjct: 1 MKLISWNIDSLNAALTSDSARAQLSRQVIDSLVEQDADIIAIQETKLSAKGPTKKHLALL 60 Query: 51 QSL--NYHIETCGQKSYNG------VAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN 102 + +Y I + + P +T+ D Sbjct: 61 EDYFPDYQIAWRSSVEPARKGYAGTMFLYKNSLPEPTITYPEIDAPSTMDDEGRIITLEF 120 Query: 103 TQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD 162 + G+ + + L+ ++P++ +GDYN+ + D Sbjct: 121 DKFFVTQVYTPNAGDGLRRLEERQIWDQKYADY---LVGLDQQKPVLASGDYNVAHKEID 177 Query: 163 CYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKG 220 NP FT E RQ F L + GFTD R H D ++YS+W + S N G Sbjct: 178 LANPTSNRRSPGFTDEERQGFTNLLDKGFTDTFRYMHGDIPNVYSWWAQRSKTSKINNTG 237 Query: 221 IRIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 RID+ + S + + ID+ R DH P+++ +DI Sbjct: 238 WRIDYWLTSNRIADKISKSDMIDSGSRQ-----DHGPILLEIDI 276 >gi|227549936|ref|ZP_03979985.1| possible exodeoxyribonuclease III [Corynebacterium lipophiloflavum DSM 44291] gi|227077952|gb|EEI15915.1| possible exodeoxyribonuclease III [Corynebacterium lipophiloflavum DSM 44291] Length = 303 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 57/310 (18%), Positives = 104/310 (33%), Gaps = 57/310 (18%) Query: 1 MSVVTVATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKNFP--FETLQ 51 MS +T+A+ NVN IRA + AW++ D++ +QE + Sbjct: 1 MS-LTIASVNVNGIRAATKVRNELNPGMLAWLETTTADVVLMQEVRASVDQARAVLAPAL 59 Query: 52 SLNYH-----IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 +H E G K GV ILS+ Q ++ + + + Sbjct: 60 EAGWHLVVAPAEAPGAKGRAGVGILSRSQLEDVEIGITSFED------SGRFIAGTLDDV 113 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 R+ +LYLP G+ + K D+K ++ F ++ GD+NI + D N Sbjct: 114 RVASLYLPSGS-AGTEKQDEKYRFLDSFEPLLESWASEHPNMVIGGDWNICHRREDLKNW 172 Query: 167 IIWENDACFTLEVRQSFQKLQ-----------------------------------NMGF 191 + F + R + + + Sbjct: 173 KTNHKKSGFLPDERAFMDAVFGVFPDDEAQDLEAKSLHSWAGAVDYASTGRRQANADPKW 232 Query: 192 TDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP 251 D R Y++W + +++ + G RID + ++ P + Sbjct: 233 FDVARRLEPESAPYTWWTFRGQAFNNDAGWRIDVQAATAAMLERAQHTWVEKVPTVEQRW 292 Query: 252 SDHTPVIVSL 261 SDH+P++V Sbjct: 293 SDHSPLMVEY 302 >gi|302837660|ref|XP_002950389.1| hypothetical protein VOLCADRAFT_104648 [Volvox carteri f. nagariensis] gi|300264394|gb|EFJ48590.1| hypothetical protein VOLCADRAFT_104648 [Volvox carteri f. nagariensis] Length = 1732 Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats. Identities = 53/293 (18%), Positives = 104/293 (35%), Gaps = 20/293 (6%) Query: 3 VVTVATWNVNSI----R---ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55 V+ + WN+N + R R + ++ DI C QE K E + Sbjct: 18 VLNIMCWNINCLTPTVRNMELRHKSFRGFMDHLQLDIACFQEVKLPAARITRELACVEGF 77 Query: 56 HIETCGQKSYNGVAILSKYQPIEI-------VTHLPGDDLDVQARFIEATFTINTQTLRI 108 S G + ++ + V L GD+ T + + + Sbjct: 78 QSFWASSTSKPGYSGVTTWCRTATAAPRDAAVDCLGGDERPELDTEGRFVLTDHGAFVLL 137 Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168 G+ + K+++++ + L ++ GD NI + D + + Sbjct: 138 NVYVPNAGDRPERARLPYKLAFLRALRTKMDELTALGRQVVLVGDLNIAAERRDVHPTLD 197 Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIM 227 ++ + + + D R H Y+ WD + + N G+RID+++ Sbjct: 198 FD---SMYDKQELAELSGLIAAYPDVWRHLHPDTEGSYTVWDERTSARAFNTGLRIDYVL 254 Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 +SP + S I T K SDH ++++L + R + +S S+ P Sbjct: 255 VSPGLLPYVQSCEILTAAAIPPKWSDHAAILLTLRV--QRAVEPESASEQALP 305 >gi|326538608|gb|ADZ86823.1| exodeoxyribonuclease III Xth [Brucella melitensis M5-90] Length = 198 Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats. Identities = 102/185 (55%), Positives = 133/185 (71%) Query: 79 IVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFA 138 I LPGDD D QARFIE ++ +T +R+ +LYLP+GNPI + K+ K+SW++R +A Sbjct: 14 INKGLPGDDSDEQARFIEGIYSTDTGVVRVVSLYLPNGNPIDTEKFPYKLSWMQRLENWA 73 Query: 139 SQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT 198 +RL LEEPL+ AGDYN+IP+P D NP W DA F + RQ+F++L+N+GFTDAIRA+ Sbjct: 74 KKRLTLEEPLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAFRRLENLGFTDAIRAS 133 Query: 199 HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVI 258 D +YSFWDY A +W KN GIRIDH+MLSPEAT+ SA I+ R W KPSDH PV Sbjct: 134 TDESGVYSFWDYQAGAWQKNNGIRIDHLMLSPEATNRFISANIEKHVRAWEKPSDHVPVT 193 Query: 259 VSLDI 263 V+L + Sbjct: 194 VTLAV 198 >gi|222619409|gb|EEE55541.1| hypothetical protein OsJ_03775 [Oryza sativa Japonica Group] Length = 360 Score = 124 bits (310), Expect = 2e-26, Method: Composition-based stats. Identities = 64/280 (22%), Positives = 111/280 (39%), Gaps = 33/280 (11%) Query: 4 VTVATWNVNSIRARI--HNL--AAWIKENNPDIICLQETKTED----------------- 42 + + +WN+N + + + N D++CLQET E Sbjct: 51 MKILSWNINGLHDVVTTKGFSARDLAQRENFDVLCLQETHLEASLGVSAIRLLIYTEKDV 110 Query: 43 KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN 102 + F +Y + + Y+G A++S+ +PI + + + D + R I F Sbjct: 111 EKFKNLIADYDSYWSCSVSRLGYSGTAVISRVKPISVQYGIGIREHDHEGRVITLEFDG- 169 Query: 103 TQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD 162 + N Y+P+ + +++ + LE +P+I AGD N Q D Sbjct: 170 ---FYLVNAYVPNSGRFLRR-LNYRVNNWDPCFSNYVKILEKSKPVIVAGDLNCARQSID 225 Query: 163 CYNPIIWENDACFTLEVRQSFQKLQNMG-FTDAIRATHDTHHLYSFWDYYADSWSKNKGI 221 +NP A FT+E R+SF+ + D R H Y+FW + NKG Sbjct: 226 IHNPPAKTKSAGFTIEERESFETNFSSKGLVDTFRKQHPNAVGYTFWG--ENQRITNKGW 283 Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 R+D+ + S T +H + I SDH+P+ + Sbjct: 284 RLDYFLASESITDKVHDSYILPDV----SFSDHSPIGLVF 319 >gi|253746967|gb|EET01931.1| Endonuclease/Exonuclease/phosphatase [Giardia intestinalis ATCC 50581] Length = 322 Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats. Identities = 60/284 (21%), Positives = 102/284 (35%), Gaps = 29/284 (10%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL--------- 53 +T+ NVN IR+ L ++I +PDIIC ETK F + Sbjct: 39 LTILAVNVNGIRSAFSKGLKSFIHSKDPDIICFSETKLGSSAFAEFMEKEAVINPETGVH 98 Query: 54 ----NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRI 108 Y C + G A + + I + E F I+ T + Sbjct: 99 TVIKGYRHAFCCSTARQGYASTAIFVKESIPVLSLCTQMGEPEFDSEGRFLHISLPTFEL 158 Query: 109 GNLYLPHGNP----------ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP 158 ++Y+P+ +I + + ++ + + +++ GD N+ Sbjct: 159 IHVYVPNSGRGSTGRPFTSENKPANLPTRIKYEELIFKYIGDLIAAGKDVVYCGDLNVAH 218 Query: 159 QPHDCYNPIIWENDACFTLEVRQSFQKL-QNMGFTDAIRATHDTHHLYSFWDYYADSWSK 217 D YNP FT E R +F KL + G D R H +S++ + + Sbjct: 219 NEIDLYNPRNNHFSPGFTDEERSAFSKLLDDHGLIDVFRTMHPQLVKFSWFSNFGRARQH 278 Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 G RID+ +++ E + I SDH P+I+ L Sbjct: 279 KHGWRIDYFVVTYEIFKRVTMVNILDD---HNTYSDHVPIIMRL 319 >gi|325967886|ref|YP_004244078.1| exonuclease [Vulcanisaeta moutnovskia 768-28] gi|323707089|gb|ADY00576.1| exonuclease [Vulcanisaeta moutnovskia 768-28] Length = 246 Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats. Identities = 62/261 (23%), Positives = 109/261 (41%), Gaps = 22/261 (8%) Query: 4 VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + +WN+N +R+ R +L + +N D++ LQE ++ + P + L Y Sbjct: 1 MRIVSWNINGLRSIMRKSSLDKLLSMDNYDMVLLQEIRSS-GDIPLTII-GLGYEAYPFP 58 Query: 62 --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K Y GV L+K PI ++ + ++LD + R I F + + G+ + Sbjct: 59 AIRKGYAGVMTLTKIHPISVIKGIGINELDSEGRIITVEF---NDFYVVNTYFPRAGDDL 115 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + + L ++P+I GD+NI D + E TLE Sbjct: 116 SRLDFKLSFCGAIEKF---LANLRSKKPIIMCGDFNIARDKID--SSFWDEKHPGLTLEE 170 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R + G+ D R H +Y++ Y + +RID+ ++S E S + A Sbjct: 171 RAWLNQFLKSGYIDTFRELHPNAKVYTWHSYREKWRA----MRIDYCIVSKELMSKVRKA 226 Query: 240 RIDTKPRGWTKPSDHTPVIVS 260 I T G SDH PV++ Sbjct: 227 EILTNIEG----SDHVPVMIE 243 >gi|195996619|ref|XP_002108178.1| hypothetical protein TRIADDRAFT_19413 [Trichoplax adhaerens] gi|190588954|gb|EDV28976.1| hypothetical protein TRIADDRAFT_19413 [Trichoplax adhaerens] Length = 527 Score = 122 bits (307), Expect = 4e-26, Method: Composition-based stats. Identities = 53/325 (16%), Positives = 95/325 (29%), Gaps = 57/325 (17%) Query: 4 VTVATWNVNSIRA------RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57 + + WNVN IR I +L ++ N DI+C QETK Y+ Sbjct: 1 MKILCWNVNGIRTTAYGKGSIKDLLEFL---NADILCFQETKLLRDQLDESIAFVEGYNS 57 Query: 58 ETCGQKSYNGVA-----ILSKYQPIEIVTHLPGDDLDVQ--------------------- 91 + + + PI + L Sbjct: 58 YFSFSRGKVAYSGVATYCKTDCAPIRVEEGLSNVWAAKNADRIGHYGNISKFNSEELSLL 117 Query: 92 ----ARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEP 147 + T + + + N+Y P +P + + K+ + + A L + Sbjct: 118 DAEGRAILTEHKTDFGRNVVVINVYCPRADPEKPERLNFKLKFYELLQERAEALLIAGKH 177 Query: 148 LIFAGDYNIIPQPHDCYNP----IIWENDACFTL--------EVRQSFQKLQNMGFTDAI 195 ++ GD N +P D P + + E + F D+ Sbjct: 178 VVIVGDVNTSHKPIDHCEPDIKAMQNSPSCHWLDNLLIPLDSEGKVDSSISAGKKFIDSF 237 Query: 196 RATHDTHHL-YSFWDYYADSWSKNKGIRIDHIMLSPEA-TSLLHSARIDTKPRGWTKPSD 253 R + ++ W + N G RID+I+ + S ++I + G SD Sbjct: 238 RYFYPRRKEAFTCWSTVTSARKTNYGTRIDYIIADKDLVVSYFAESQIQPEIEG----SD 293 Query: 254 HTPVIVSLDIPEPRKKQQDSTSQNM 278 H P+ L + Sbjct: 294 HCPIYADLKFTINPSDKLPWLCTKY 318 >gi|323508160|emb|CBQ68031.1| related to APN2-AP endonuclease, exonuclease III homolog [Sporisorium reilianum] Length = 737 Score = 122 bits (307), Expect = 4e-26, Method: Composition-based stats. Identities = 49/307 (15%), Positives = 93/307 (30%), Gaps = 54/307 (17%) Query: 4 VTVATWNVNSIRARIHN------LAAW---IKENNPDIICLQETKTEDKNF--PFETLQS 52 + + WN+N +R + L W ++ DI C QETK K P L S Sbjct: 1 MRITVWNINGLRT-LKGYQPWYKLPDWEACLEHLGADIACFQETKMTRKQLTEPMCILPS 59 Query: 53 LNYHIETCGQKSYNGVAILSKY----------------QPIEIVTHLPGDDLDVQARFIE 96 N K Y+G K + T+ + + Sbjct: 60 YNAFFNFHPAKGYSGTVTYVKKSVSIPLKAEQGITGRLPVTNVSTNPLIPSEPIGCIPAD 119 Query: 97 ATFTINTQTL---------------RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQR 141 + Q + N + + K+++ + A + Sbjct: 120 TRDDVEPQIWNALDDEGRCVVLDLGLFVLFNVYCPNETGPERLEYKMTYYQGLAERAHRL 179 Query: 142 LELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG-------FTDA 194 ++ ++ GD NII P D + + + + + Sbjct: 180 IQAGRQVMIVGDMNIIRDPIDHCDAEQSMKEYGWDHFHQHPARSWFQTFLAPHGKFHDVG 239 Query: 195 IRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDH 254 + +++ W+ D+ N G+R+D+ +++ + A I G SDH Sbjct: 240 RLYHPERKKMFTCWNTLIDARPANYGVRLDYTLVTEGLLDWIKGADIQPDVYG----SDH 295 Query: 255 TPVIVSL 261 P+ V L Sbjct: 296 CPIYVDL 302 >gi|90023311|ref|YP_529138.1| histidine kinase [Saccharophagus degradans 2-40] gi|89952911|gb|ABD82926.1| histidine kinase [Saccharophagus degradans 2-40] Length = 261 Score = 122 bits (307), Expect = 4e-26, Method: Composition-based stats. Identities = 61/266 (22%), Positives = 99/266 (37%), Gaps = 14/266 (5%) Query: 4 VTVATWNVNSI-RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + V + +V+ I +A L WI + + DIICLQ+ + + + Y Sbjct: 1 MRVISLSVDGIFQAAQRGLYDWIADQDADIICLQDLRALEPELDNDIFHPEGYFAYFFDS 60 Query: 62 -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 K YNGVAI ++YQP ++ L +E + L Sbjct: 61 GVKHYNGVAIYTRYQPKALIYGLGFSSGVD----MEGRYLQIDFERYSIGTLLAPSAVNP 116 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF-TLEV 179 + + KI + F + IF G++N+ D N E+ + F E Sbjct: 117 AESQEVKIQFFDDFQALLHKITRKRRNYIFCGNWNMAHTRKDVENWARNEDQSGFLGHEQ 176 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + Q + +G+ DA R YS+W + G R+DH ++S + A Sbjct: 177 QWMNQLFRQLGYADAFRLAVPDAGEYSWWPSGEVGVAD--GWRVDHQVISEGLIKKVEYA 234 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPE 265 + S H PVIV DI + Sbjct: 235 AMYK----TKTFSSHLPVIVDYDIDD 256 >gi|307579157|gb|ADN63126.1| exodeoxyribonuclease III Xth [Xylella fastidiosa subsp. fastidiosa GB514] Length = 237 Score = 122 bits (307), Expect = 5e-26, Method: Composition-based stats. Identities = 38/240 (15%), Positives = 65/240 (27%), Gaps = 17/240 (7%) Query: 33 ICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQA 92 +C+QE K + YH+ G + ++ Y E Sbjct: 2 LCVQEIKAQRHQLVGPDFFPAGYHVCFRDATIKKGYSGVAIYSRCEPDELRTTLGWAEFD 61 Query: 93 RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG 152 + + + K ++ + L + G Sbjct: 62 EEGRYVEARFGNLSVV--SFYIPSGSSGEKRQHYKFEVMRWLRPILCEWLLSGRDYVLCG 119 Query: 153 DYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG-----------FTDAIRATHDT 201 D+NI+ D N + ++ R L + D R H Sbjct: 120 DWNIVRSALDIRNWKSNQKNSGCLPLERDWLNGLCADSLHDVNSAQGRGWVDTYRVLHPQ 179 Query: 202 HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 Y++W + N G RID+ +SP + I + R SDH P V Sbjct: 180 GEDYTWWSNRGAARVNNVGWRIDYQFVSPGLRERVSRCAIYCEQR----FSDHAPYTVEY 235 >gi|302686738|ref|XP_003033049.1| hypothetical protein SCHCODRAFT_81869 [Schizophyllum commune H4-8] gi|300106743|gb|EFI98146.1| hypothetical protein SCHCODRAFT_81869 [Schizophyllum commune H4-8] Length = 697 Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats. Identities = 53/328 (16%), Positives = 96/328 (29%), Gaps = 74/328 (22%) Query: 4 VTVATWNVNSIRAR--------IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55 + + TWN+N IR + + + + + DIIC QE K+ +N P + Y Sbjct: 1 MKIMTWNINGIRTIPQYHPWNGLKSHKDILDKLDADIICFQEMKSSRQNLPKDVAVPPGY 60 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT---------- 105 G + ++ Y + D L A + + Sbjct: 61 TSFFSFPTKKAGYSGVAIYVKDQYTPFKVEDHLCGLANATASDADRISPALSSYPMHRFA 120 Query: 106 ----------------------------LRIGNLYLPHGNPITSTKYDDKISWIKRFLRF 137 + N+Y P+ + K+ + + Sbjct: 121 DLDDDEDDPIDFKSLDAEGRTLVADFGLFVLINVYCPNDGSEAQERMKYKMDFHRMLSVR 180 Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCYN------------------------PIIWENDA 173 ++ +I GD N + D ++ + Sbjct: 181 VRGLIDEGREVIVVGDLNAVSDVGDHCEGALTVRKIIDEARKEGQEVGEKEAEEMFYDTM 240 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 +R S + R + +Y+ W+ + + N G RID I+++P Sbjct: 241 PARRWLRDSLVEHGGPLVDVCKRFWPERKGMYTCWNTKISARASNYGARIDFILVTPYLL 300 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSL 261 L+ A I K SDH PVIV Sbjct: 301 PLIKHADIQPDV----KGSDHCPVIVEF 324 >gi|213405473|ref|XP_002173508.1| DNA-(apurinic or apyrimidinic site) lyase [Schizosaccharomyces japonicus yFS275] gi|212001555|gb|EEB07215.1| DNA-(apurinic or apyrimidinic site) lyase [Schizosaccharomyces japonicus yFS275] Length = 554 Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats. Identities = 55/308 (17%), Positives = 92/308 (29%), Gaps = 54/308 (17%) Query: 4 VTVATWNVNSI---------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 + + TWNVN I R+ + + + DIIC+QE K + + FP + Sbjct: 1 MRILTWNVNGIQNPFNYGQWRS-KKSYKEVFETLDADIICVQELKAQKQGFPEQFALIEG 59 Query: 55 YHIETCGQKSYNGVAIL------SKYQPIEIVTHLPGDDLDVQARFI------------- 95 Y G + + S P + + G + Sbjct: 60 YDAYFTFPLEKKGYSGVGVYVKKSLTVPCKAEEGITGILPVPDRHYCYKDAPEDEQIGYY 119 Query: 96 --------------EATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQR 141 E + L + N ++ + R Sbjct: 120 PVNLDKATERLIDSEGRCILLDFQLFVLIGVYCPVNSGEKRLKFRRLFYNALRDRIIRLT 179 Query: 142 LELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF------TLEVRQSFQKLQNMGFTDAI 195 E + +I GD NI+ D + + + VR Q D Sbjct: 180 QEAKRNVILLGDINILRDELDTADNKDIQKEQFDESIRESREWVRGMLQPHPEGLLIDTT 239 Query: 196 RATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDH 254 R H +++ W+ ++ N G RID+I +SP + A I + G SDH Sbjct: 240 RHRHPVRRGMFTCWNTRLNTRPTNFGTRIDYICISPALLPWMQDANIMPEIMG----SDH 295 Query: 255 TPVIVSLD 262 PV + Sbjct: 296 CPVFLDFK 303 >gi|229828142|ref|ZP_04454211.1| hypothetical protein GCWU000342_00199 [Shuttleworthia satelles DSM 14600] gi|229792736|gb|EEP28850.1| hypothetical protein GCWU000342_00199 [Shuttleworthia satelles DSM 14600] Length = 277 Score = 122 bits (305), Expect = 6e-26, Method: Composition-based stats. Identities = 61/284 (21%), Positives = 101/284 (35%), Gaps = 31/284 (10%) Query: 4 VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDK---NFPFETL 50 + +WN++S+ A + + I PD +QETK + E + Sbjct: 1 MRFISWNIDSLNAALTGTSARAQMSAAVLEKIAGMRPDYFAIQETKLPEAGPNQKQMEII 60 Query: 51 QSL--NYHIETCGQKSYNGVAILSKYQPIEIVTHL------PGDDLDVQARFIEATFTIN 102 + L +Y + P TI Sbjct: 61 EKLFSDYDCHYISSRPPARKGYAGVMILARRDAGPVLEVTKPSIGAPDTMDVEGRILTIE 120 Query: 103 TQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD 162 T +Y P+ D + L+ +P+I GDYN+ + D Sbjct: 121 TADFFFTTVYTPNAGDGLRRLDDRQQWD--ARYADYLAGLDARKPVIACGDYNVAHEEID 178 Query: 163 CYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADS-WSKNKG 220 NP A FT + R+ F +L + GF D+ R H D YS+W S N G Sbjct: 179 LKNPDANHMSAGFTDQEREGFTRLLDRGFADSFRCLHRDLADAYSWWAQRVKSSKINNSG 238 Query: 221 IRIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 RID+ ++S + ++S+ ID+ R DH P+++ +D+ Sbjct: 239 WRIDYFLVSDRILNRVNSSEMIDSGARQ-----DHCPLLLEIDV 277 >gi|224159467|ref|XP_002199909.1| PREDICTED: similar to APEX nuclease, partial [Taeniopygia guttata] Length = 235 Score = 121 bits (304), Expect = 9e-26, Method: Composition-based stats. Identities = 52/241 (21%), Positives = 96/241 (39%), Gaps = 15/241 (6%) Query: 24 WIKENNPDIICLQETKTEDKNFPFETLQSLN----YHIETCGQKSYNGVAILSKYQPIEI 79 W++E PD++CLQETK P E + + Y+GV +L++ +P+++ Sbjct: 1 WVQEEAPDVLCLQETKCAAAAVPAEVRALPGLPHQFWCSAKDRPGYSGVGLLARSEPLDV 60 Query: 80 VTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFAS 139 + +D A + + + N + + Sbjct: 61 TYGIGEGRMDQTAGVMTTEIP------SLFVVCAYVPNAGRGMVALEPRLRLDAAFLQFL 114 Query: 140 QRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH 199 +RL+ +P++ GD N+ D +P FT + R F +L GF D+ R + Sbjct: 115 RRLDARKPVLLCGDLNVAHADIDLCHPRANRASPGFTPQERDGFSRLLAAGFVDSFRHLY 174 Query: 200 DT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVI 258 ++FW Y + ++N G R+D+ ++S L ++I R SDH P+ Sbjct: 175 PAARGAFTFWTYLGGARARNVGWRLDYAVVSQRLLGALCDSKI----RNTVPGSDHCPIT 230 Query: 259 V 259 Sbjct: 231 A 231 >gi|94502050|ref|ZP_01308555.1| Exonuclease III [Oceanobacter sp. RED65] gi|94425804|gb|EAT10807.1| Exonuclease III [Oceanobacter sp. RED65] Length = 256 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 46/265 (17%), Positives = 105/265 (39%), Gaps = 13/265 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + V +V+ + A + WI +++ DI+C+Q K ++ + L Y+ Sbjct: 1 MKVINVHVDGLEAAVKDGFYDWIAQHDADIVCVQNLKAKEYQLSDDVLYPEGYNAYFIDA 60 Query: 63 KSYN--GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + N GVA+++K P I+ + + D R+I+A F + + + H + Sbjct: 61 EPDNYAGVAVITKAMPKAIMIGMAFEACDRYGRYIQADFDEVSVGSVMFPIEDEHNSLED 120 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + + F+ + IFAG + + + D + + ++ F E + Sbjct: 121 KFAFQQQ------FIEHLQKTKRKRREFIFAGFFGVAHKSIDLSDWKAHQGESGFLPEEQ 174 Query: 181 QSFQKLQN-MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 ++ + F DA R + + ++++ + G R+D+ + +P + A Sbjct: 175 AFMDQVTGPLEFVDAFREANFGENQFTWYADEESARRNQNGWRLDYQICTPNLRQYVVDA 234 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIP 264 +ID + + H I+ + Sbjct: 235 KIDRERLWGGQ---HAATIIEYEFD 256 >gi|331007424|ref|ZP_08330604.1| Exodeoxyribonuclease III [gamma proteobacterium IMCC1989] gi|330418762|gb|EGG93248.1| Exodeoxyribonuclease III [gamma proteobacterium IMCC1989] Length = 259 Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats. Identities = 59/262 (22%), Positives = 102/262 (38%), Gaps = 13/262 (4%) Query: 4 VTVATWNVNSI-RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61 + + + +V+ + +A L W+ E + DIICLQ+ + + + Y+ Sbjct: 1 MRIISLSVDGLHQAAQRGLYDWLAEQDADIICLQDLRCLEYETDDDVFHPKGYNAYFFDS 60 Query: 62 -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 K YNGVAI S+ P ++ I+ + IG+L P Sbjct: 61 GVKQYNGVAIYSRVIPKALIYG---LGFSSGVDMEGRYLQIDFDHISIGSLLAPSA-FTD 116 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 ++ K + ++ IF G++ + P+ D NP +N + F E + Sbjct: 117 IESHEVKAQFFDDLQAHLTKISRKRRDFIFCGNWAVAPKNEDVSNPDQQKNQSGFLPEEK 176 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 Q +L +G+ DA R + YS+W + K R D ++S + + A Sbjct: 177 QWMSQLAPIGYVDAFRQGNTDKDEYSWWP--SGEQGKGDAWRTDLQIVSASLKNQVEYAV 234 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 I K + S H VIV D Sbjct: 235 IYKK----QQFSSHLAVIVDYD 252 >gi|288802560|ref|ZP_06407999.1| exodeoxyribonuclease III [Prevotella melaninogenica D18] gi|288335088|gb|EFC73524.1| exodeoxyribonuclease III [Prevotella melaninogenica D18] Length = 253 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 49/266 (18%), Positives = 96/266 (36%), Gaps = 19/266 (7%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKT--EDKNFPFETLQSLNYHIETCG 61 + + +WN IR + NL ++ PDI+CLQETK + NF F+ Q Y E+ Sbjct: 1 MRIISWNTFGIRTALPNLQKMLESCTPDIVCLQETKVRTQYANFDFKGYQQ--YWNESTD 58 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +L I + D + I + + Sbjct: 59 FAHLGTALLLKSSTLISVTYDNFDVYYDKGNVIVTELKEIYVVCVYVPYAGATATTRDNR 118 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND--ACFTLEV 179 + + +L+ +P + GD+N++ Q D ++ + E Sbjct: 119 HH-------WYKCFQSIIHQLQQNKPCVICGDFNVVQQDIDAWDKAVINTSLACFSKEER 171 Query: 180 RQSFQKLQNMGFTDAIRATHDTHH--LYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 + + +Q D R + + ++++ + +D KG RID ++S + S + Sbjct: 172 AEIGRFVQEEQLIDVYRYLYPSTKSEGFTYFPFGSDYRKNKKGYRIDLFLISKQLISKVV 231 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263 G S + P+++ +DI Sbjct: 232 DCYPLQDVEG----SCNVPLLLDIDI 253 >gi|218460834|ref|ZP_03500925.1| exodeoxyribonuclease III protein [Rhizobium etli Kim 5] Length = 164 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 74/158 (46%), Positives = 103/158 (65%) Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167 IG LYLP+GNP S K+D K+ W +R +A++ LE+E P I AGD+N++P D Y P Sbjct: 3 IGCLYLPNGNPFPSAKFDYKLRWFRRLHAYAAELLEIEVPSILAGDFNVMPTEIDVYKPE 62 Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227 W NDA F EVR+++ +L G+TDA+R H +Y+FW Y+ +S+ ++ G+RIDH + Sbjct: 63 RWLNDALFRPEVRKAYAQLVAQGWTDAVRHLHPDERIYTFWKYWRNSFERDAGLRIDHFL 122 Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 LSP L SA + KPRGW SDH PV++ LD PE Sbjct: 123 LSPTVAPWLRSASVRRKPRGWEHTSDHAPVMIELDTPE 160 >gi|307243437|ref|ZP_07525593.1| exodeoxyribonuclease III [Peptostreptococcus stomatis DSM 17678] gi|306493161|gb|EFM65158.1| exodeoxyribonuclease III [Peptostreptococcus stomatis DSM 17678] Length = 275 Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats. Identities = 55/282 (19%), Positives = 104/282 (36%), Gaps = 29/282 (10%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPF------ 47 + + +WN++S+ A + ++ + + DII LQETK K Sbjct: 1 MKLISWNIDSLNAALTSDSARALLSRDVLKNLAGMDADIIALQETKLSAKGPTKKHIECL 60 Query: 48 -ETLQSLN--YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 E + + + + + +++ P T+ Sbjct: 61 EEIFSDYDHVWRSSVEPARKGYAGTMFLYKKGMDVKATYPEIGAPCTMDSEGRIITLELD 120 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 + + +Y P+ D + + + L +P++ GDYN+ + D Sbjct: 121 SCYVTQVYTPNAGDGLKRLDDRQ--AWDKKYADYLEGLAKHKPVLACGDYNVAHKEIDLA 178 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIR 222 NP FT E R+ F L GF D R H D +YS+W S N G R Sbjct: 179 NPASNHRSPGFTDEEREGFTNLLARGFVDTFRQVHGDVEEVYSWWAQRVKTSKVNNTGWR 238 Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 ID+ ++S + + + +D+ R DH P+++ +++ Sbjct: 239 IDYWIVSQDVADKVRVSEMVDSGERQ-----DHAPILLEVEL 275 >gi|325180868|emb|CCA15278.1| DNA(apurinic or apyrimidinic site) lyase putative [Albugo laibachii Nc14] Length = 475 Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats. Identities = 49/305 (16%), Positives = 90/305 (29%), Gaps = 42/305 (13%) Query: 1 MSVVTVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56 M + +WNVN +RA + L ++ IIC QETK E ++ Sbjct: 1 MPKAKIVSWNVNGLRAILQRDKVKLNDFLHALQASIICFQETKLTRSELDEELACPKDFD 60 Query: 57 IETCGQKSYNGV----------------------AILSKYQPIEIVTHLPGDDLDVQARF 94 + NG K + + + Sbjct: 61 AFYSHCRVRNGYSGVVTFVRSDLPTIAAEEGLTGMWTRKDTIGHVNMGDAEIPSQMLSEL 120 Query: 95 IEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDY 154 ++ T + + + + KI++ + R + + ++ GD Sbjct: 121 ESEGRSVITDHGAFILINVYCPAIRNEERLEYKIAFHELLTRRIQTLRKASKRVVLVGDL 180 Query: 155 NIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG---FTDAIRATHDTHHLYSFWDYY 211 N+ + D P E R+ +L + + D ++ W+ Sbjct: 181 NVASKRIDHCEPKASEFGEFEAHPCRKWLHRLISSPAPLRDIYRKLYPDKKKAFTCWNTA 240 Query: 212 ADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP-------------SDHTPVI 258 + N G RID+I++ + + S R K SDH PV Sbjct: 241 TMARKNNYGTRIDYILVDEKLQDSVLSCRSFAFKSILEKWLTLAIRLDPERLGSDHCPVF 300 Query: 259 VSLDI 263 +DI Sbjct: 301 AEIDI 305 >gi|218202527|gb|EEC84954.1| hypothetical protein OsI_32178 [Oryza sativa Indica Group] Length = 619 Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats. Identities = 65/355 (18%), Positives = 103/355 (29%), Gaps = 77/355 (21%) Query: 3 VVTVATWNVNSIRARIHN---LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 +V + T+NVN +R R+ L + + DIIC QETK ++ + + + Y Sbjct: 1 MVKIVTYNVNGLRPRVAQHGSLRRLLDALDADIICFQETKLSRQDLSGDVIMAEGYEAFI 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIE----------------------- 96 +S G S VT E Sbjct: 61 SCNRSSKGRGAYSGVATFCRVTSAFSSQEVGLPVAAEEGFTGLQETAKNSETIGDFVLVT 120 Query: 97 ----------------------ATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRF 134 + + N+Y P + K+ + K Sbjct: 121 PVEEEGLGEVTKEELLKVDNEGRCVITDHGHFVLFNIYGPAVEEDDIERVRFKLLFYKIL 180 Query: 135 LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDA 194 R L L + + GD NI P D + F +R ++ F Sbjct: 181 QRRWEHLLALGKRVFVVGDLNIAPSSIDRCDAQPGFEKQTFRKWLRSMLREHGGPFFDAF 240 Query: 195 IRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS-------------LLHSARI 241 + Y+ ++ + N G RIDHI++S + I Sbjct: 241 RSKHPERVGAYTCFNQKVGAEVYNYGSRIDHILISGACFHHCGSVDDHSIFPCHVEECEI 300 Query: 242 -DTKPRGWTK--------------PSDHTPVIVSL-DIPEPRKKQQDSTSQNMKP 280 D RG +K SDH PV + L +IPE S++ P Sbjct: 301 MDHFRRGNSKNMSMWKGGRSSKLEGSDHIPVYIVLNEIPELPVHNTPSSAARYLP 355 >gi|300932899|ref|ZP_07148155.1| putative exodeoxyribonuclease [Corynebacterium resistens DSM 45100] Length = 344 Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 64/342 (18%), Positives = 107/342 (31%), Gaps = 83/342 (24%) Query: 3 VVTVATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKNFPFETLQ--SL 53 +TVAT NVN IRA + W+++ D++ +QE + K Sbjct: 2 TLTVATVNVNGIRAAAKQRSETNLGILPWLEQTRADVVLMQEVRANQKQTEAALAPAIEA 61 Query: 54 NYHIE--TCGQKSYNGVAILSKYQPIEIVTHLPG-------------DDLDVQARFIEAT 98 +H+ K GV ILS+ +VT + D R+IEA Sbjct: 62 GWHLAQAEASAKGRAGVGILSRLPLTHVVTGFGHAEEQAGLTASPGAREFDDSGRYIEAR 121 Query: 99 FTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLE----LEEPLIFAGDY 154 + + + +LYLP G T + + + E +I GD+ Sbjct: 122 VNASFGPVTVASLYLPSGAADTEKQDEKYRFLDSFGHFMQQRAASTVDGKPENMIIGGDW 181 Query: 155 NIIPQPHDCYNPIIWENDACFTLEVRQSFQK----------------------------- 185 NI + D N + F + R Sbjct: 182 NICHRRADLKNWRTNRTKSGFLPDERAFMDSILGVWPDSASQVGDETDAGRTGNPAGGVG 241 Query: 186 ----------------------LQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIR 222 +N + D +R + YS+W Y ++ + G R Sbjct: 242 DFFGAVDYTPSPLAQQRLREGAPENPQWFDVVRRINPEADGPYSWWTYRGQAFDTDAGWR 301 Query: 223 IDHIMLSPEATSLLH---SARIDTKPRGWTKPSDHTPVIVSL 261 +D +++ +A +D + SDH+PVIV Sbjct: 302 LDLHVVTAGMLERAQEADNAWVDRVDSYDLRWSDHSPVIVEY 343 >gi|302346392|ref|YP_003814690.1| putative exodeoxyribonuclease III [Prevotella melaninogenica ATCC 25845] gi|302150873|gb|ADK97134.1| putative exodeoxyribonuclease III [Prevotella melaninogenica ATCC 25845] Length = 253 Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats. Identities = 49/266 (18%), Positives = 99/266 (37%), Gaps = 19/266 (7%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTED--KNFPFETLQSLNYHIETCG 61 + + +WN IR + NL ++ PDI+CLQETK NF + + Sbjct: 1 MRIISWNTFGIRTALPNLQQMLESCTPDIVCLQETKVRTLYANFD---FKGYRQYWNEST 57 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 ++ G A+LSK + VT+ + + I + Sbjct: 58 DFAHLGTALLSKSSSLIAVTYDNFNVYYDKGNVIVTELKEIYVVCVYVPYAGATATTRDN 117 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND--ACFTLEV 179 + + + +L+ +P + GD+N++ Q D ++ + E Sbjct: 118 RHHWY------KCFQSLIHQLQQNKPCVICGDFNVVQQDIDAWDKAVINTSLACFSKEER 171 Query: 180 RQSFQKLQNMGFTDAIRATHDTHH--LYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 + + +Q D R + + ++++ + +D KG RID ++S + S + Sbjct: 172 AEIGRFVQEEQLIDVYRYLYPSTKSEGFTYFPFGSDYRKNKKGYRIDLFLISKQLISKVV 231 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263 G S + P+++ +DI Sbjct: 232 DCYPLQDVEG----SCNVPLLLDIDI 253 >gi|261218771|ref|ZP_05933052.1| exodeoxyribonuclease III Xth [Brucella ceti M13/05/1] gi|260923860|gb|EEX90428.1| exodeoxyribonuclease III Xth [Brucella ceti M13/05/1] Length = 158 Score = 119 bits (299), Expect = 4e-25, Method: Composition-based stats. Identities = 88/158 (55%), Positives = 116/158 (73%) Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165 +R+ +LYLP+GNPI + K+ K+SW++R +A +RL LEEPL+ AGDYN+IP+P D N Sbjct: 1 MRVVSLYLPNGNPIDTEKFPYKLSWMQRLENWAKKRLTLEEPLVLAGDYNVIPEPVDARN 60 Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225 P W DA F + RQ+F++L+N+GFTDAIRA+ D +YSFWDY A +W KN GIRIDH Sbjct: 61 PQAWLGDALFQPQSRQAFRRLENLGFTDAIRASTDESGVYSFWDYQAGAWQKNNGIRIDH 120 Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +MLSPEAT+ SA I+ R W KPSDH PV V+L + Sbjct: 121 LMLSPEATNRFISANIEKHVRAWEKPSDHVPVTVTLAV 158 >gi|115480379|ref|NP_001063783.1| Os09g0536000 [Oryza sativa Japonica Group] gi|50726587|dbj|BAD34221.1| AP endonuclease 2-like [Oryza sativa Japonica Group] gi|113632016|dbj|BAF25697.1| Os09g0536000 [Oryza sativa Japonica Group] gi|215736944|dbj|BAG95873.1| unnamed protein product [Oryza sativa Japonica Group] Length = 619 Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats. Identities = 62/355 (17%), Positives = 100/355 (28%), Gaps = 77/355 (21%) Query: 3 VVTVATWNVNSIRARIHN---LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 +V + T+NVN +R R+ L + + DIIC QETK ++ + + + Y Sbjct: 1 MVKIVTYNVNGLRPRVAQHGSLRRLLDALDADIICFQETKLSRQDLSGDVIMAEGYEAFI 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIE----------------------- 96 +S G S VT E Sbjct: 61 SCNRSSKGRGAYSGVATFCRVTSAFSSQEVALPVAAEEGFTGLQETAKNSETIGDFVLVT 120 Query: 97 ----------------------ATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRF 134 + + N+Y P + K+ + K Sbjct: 121 PVEEEGLGEVTKEELLKVDNEGRCVITDHGHFVLFNIYGPAVEEDDIERVRFKLLFYKIL 180 Query: 135 LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDA 194 R L L + + GD NI P D + F +R ++ F Sbjct: 181 QRRWEHLLALGKRVFVVGDLNIAPSSIDRCDAQPGFEKQTFRKWLRSMLREHGGPFFDAF 240 Query: 195 IRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS-------------LLHSARI 241 + Y+ ++ + N G RIDHI++S + I Sbjct: 241 RSKHPERVGAYTCFNQKVGAEVYNYGSRIDHILISGACFHHCGSVDDHSIFPCHVEECEI 300 Query: 242 DTKPR---------------GWTKPSDHTPVIVSL-DIPEPRKKQQDSTSQNMKP 280 R + SDH PV + L +IPE S++ P Sbjct: 301 MDHFRRGNSENMSMWKGGRSSKLEGSDHIPVYIVLNEIPELPVHNTPSSAARYLP 355 >gi|183179517|ref|ZP_02957728.1| exodeoxyribonuclease III [Vibrio cholerae MZO-3] gi|183012928|gb|EDT88228.1| exodeoxyribonuclease III [Vibrio cholerae MZO-3] Length = 219 Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats. Identities = 59/219 (26%), Positives = 94/219 (42%), Gaps = 9/219 (4%) Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNL 111 + Y + GQK++ GVAIL K P+E++ P ++ + + N Q I N Sbjct: 1 MGYQVYFHGQKAHYGVAILCKQTPVEVIKGFPTDNEEHQKRMIMATFADQNGQKTTILNG 60 Query: 112 YLPHGNPITS-TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCY 164 Y P G+ + TK+ K + + + + + E L+ GD NI P Sbjct: 61 YFPQGDNVEHETKFPYKRQFYRDLMTYLREHRSNSERLVVMGDINISPLDLDIGIGEANR 120 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRI 223 + F E R+ Q L + G D R H +S++DY + + N+G+RI Sbjct: 121 KRWLQTGKCSFQPEEREWLQTLLDWGLVDTFRQLHPDVSDQFSWFDYRSRGFEDNRGLRI 180 Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 D I+ +P A ID + R KPSDH P+ + Sbjct: 181 DVILATPTLAETCQEAGIDYELRAIDKPSDHAPIWATFK 219 >gi|269957925|ref|YP_003327714.1| exodeoxyribonuclease III Xth [Xylanimonas cellulosilytica DSM 15894] gi|269306606|gb|ACZ32156.1| exodeoxyribonuclease III Xth [Xylanimonas cellulosilytica DSM 15894] Length = 316 Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats. Identities = 44/158 (27%), Positives = 75/158 (47%), Gaps = 2/158 (1%) Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEE--PLIFAGDYNIIPQPHDC 163 +R+ +LY+P+G + Y K++W++ A+ L + + GD+N+IP D Sbjct: 157 VRVWSLYIPNGRAVGDPHYAYKLAWLEALRTQAAGWLTADPAAQVALVGDWNVIPLDTDV 216 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223 Y+P + T R +F + G+ + R Y++WDY ++ KN G+RI Sbjct: 217 YDPTAFIGSTHVTPAERAAFAAFADAGYREVSREHLPAERTYTYWDYKQLAFPKNNGMRI 276 Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 D +P + + ID + R SDH PVI+ L Sbjct: 277 DFTWATPALADRVTAVTIDREERKGKGASDHVPVILDL 314 Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats. Identities = 28/76 (36%), Positives = 46/76 (60%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSIRAR+ A+++ + D++ +QETK D FP ++ Y + G Sbjct: 1 MRLATWNVNSIRARVDRAVAFLERWDVDVLAIQETKCRDDQFPHAAFEAAGYEVAHVGFS 60 Query: 64 SYNGVAILSKYQPIEI 79 +NGVAI+S+ ++ Sbjct: 61 QWNGVAIVSRVGIDDV 76 >gi|159490968|ref|XP_001703445.1| hypothetical protein CHLREDRAFT_143864 [Chlamydomonas reinhardtii] gi|158280369|gb|EDP06127.1| predicted protein [Chlamydomonas reinhardtii] Length = 437 Score = 118 bits (296), Expect = 7e-25, Method: Composition-based stats. Identities = 59/293 (20%), Positives = 107/293 (36%), Gaps = 40/293 (13%) Query: 4 VTVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTE-DKNFPFETLQSL-NYHI 57 + + +WNV +RA + +++ + +++CLQE K + + E L L +H Sbjct: 142 LNILSWNVAGLRALLKKTPDAVSSLVSREAAEVVCLQEHKLQANHQKEVEELLGLQGWHH 201 Query: 58 ETCGQKS---YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG----- 109 + Y+GV++ ++ P+ +V L E T+ + Sbjct: 202 AWAFSTAKLGYSGVSVHTRSPPLSVVVGLGHGGPGAADPDPEHEGEGRVVTVELEGLFLV 261 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 N+Y+P+ W F F +P++ GD N + D + P Sbjct: 262 NVYVPNSGEGLKRLDYRVGRWDGAFAAFLQGLQARGKPVVVTGDLNCAHKEIDIHAPKTN 321 Query: 170 ENDACFTLEVRQSFQKL--QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227 A FT E R+SF +L G D R + Y+++ + KNKG R+D+ + Sbjct: 322 LKSAGFTPEERESFGRLLLAEAGLADTFRRLYPDTVAYTYFTRRFNCREKNKGWRLDYFL 381 Query: 228 LSPEATS--------------------LLHSARIDTKPRGWTKPSDHTPVIVS 260 S ++ I G SDH P+ ++ Sbjct: 382 TSESMMPPELQQGGEGAAAAAGPASAWAVYDTWIMQDVYG----SDHLPLGLT 430 >gi|116511599|ref|YP_808815.1| exonuclease III [Lactococcus lactis subsp. cremoris SK11] gi|116107253|gb|ABJ72393.1| Exonuclease III [Lactococcus lactis subsp. cremoris SK11] Length = 285 Score = 118 bits (296), Expect = 7e-25, Method: Composition-based stats. Identities = 66/289 (22%), Positives = 108/289 (37%), Gaps = 37/289 (12%) Query: 5 TVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTE---DKNFPFETLQ 51 +WN++S+ A + + + + PD++ +QETK K E L+ Sbjct: 4 KFISWNIDSLNAALTGTSERAALSLAVVKNLAQAQPDVLAIQETKLPSTGPKKAHLEVLE 63 Query: 52 SL--NYHIETCG-----QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 L Y I +K Y+G IL K E V P D T+ Sbjct: 64 DLFKGYKIVWRSSVEPARKGYSGTMILYKETLPEPVITFPEIDAPEPMDAEGRIITLEFP 123 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 + +Y P+ + D R L+ ++P+ GD+N D Sbjct: 124 DFFVTTVYTPNAQEGLTRL--DLRGIWDDNYRNYLTSLDAQKPVFVCGDFNAAYTEIDLA 181 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL--------YSFWDYYAD-SW 215 NP N A FT + R+ F +L GFTD R H Y+++ A S Sbjct: 182 NPRGNHNSAGFTDQEREKFGQLLEAGFTDTFRKLHGPVEKFYEEGRSIYTWFAQRAKTSK 241 Query: 216 SKNKGIRIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 N G RID+ ++S + + +D+ R DH P+++ ++ Sbjct: 242 LNNSGWRIDYWLVSNRLADAIKVSEPLDSGERL-----DHVPILLEFEL 285 >gi|116491630|ref|YP_811174.1| exonuclease III [Oenococcus oeni PSU-1] gi|116092355|gb|ABJ57509.1| Exonuclease III [Oenococcus oeni PSU-1] Length = 273 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 59/280 (21%), Positives = 98/280 (35%), Gaps = 27/280 (9%) Query: 4 VTVATWNVNSIRARIHNL----------AAWIKENNPDIICLQETKT--------EDKNF 45 + +WN++S+ A I + I PD +QETK +D+ Sbjct: 1 MNFISWNIDSLNAAIQHKSPRGELTYKTLEKIAAAKPDFFSIQETKLPENGLNKKQDEVL 60 Query: 46 PFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT 105 L + + +++ + I P D T+ Sbjct: 61 EELFPNYLRFVKNSTPPAKKGYAGVMTLAKEAPISYDKPVIDAPGTMDQEGRIVTLEYPD 120 Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165 + N+Y P+ R L + +IF+GD N+ + D N Sbjct: 121 FYLLNVYTPNSGDGLRRLPARGKWD--DQFRHYISDLSERKIVIFSGDLNVAHEEIDLKN 178 Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD-SWSKNKGIRID 224 N A FT + R+ F +L + GF D R H YS+W + + N G RID Sbjct: 179 SSSNHNSAGFTDQEREKFSRLLSAGFIDTWRLQHPKEIAYSWWSQRNRLAKTNNAGWRID 238 Query: 225 HIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 + ++S A + IDT R DH P+ + + + Sbjct: 239 YYIVSNSAKEKIVKTGMIDTGTRA-----DHAPIYLQMKL 273 >gi|71004198|ref|XP_756765.1| hypothetical protein UM00618.1 [Ustilago maydis 521] gi|46095654|gb|EAK80887.1| hypothetical protein UM00618.1 [Ustilago maydis 521] Length = 663 Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats. Identities = 47/307 (15%), Positives = 89/307 (28%), Gaps = 54/307 (17%) Query: 4 VTVATWNVNSIRARIHN------LAAW---IKENNPDIICLQETKTEDKNF--PFETLQS 52 + + WN+N +R + L W + DI C QETK K P L S Sbjct: 1 MRITVWNINGLRT-LKGYQPWYKLPDWEACLDHLGADIACFQETKMTRKQLTEPMCILPS 59 Query: 53 LNYHIETCGQKSYNGVAILSKY----------------QPIEIVTHLPGDDLDVQARFIE 96 N K Y+G + + T+ + + + Sbjct: 60 YNAFFNFHPTKGYSGTVTYVRKSVSIPLKAEQGITGRLSVTNVSTNPLIPNDPIGCIPAD 119 Query: 97 ATFTINTQTL---------------RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQR 141 ++ Q + N + + K+++ + A + Sbjct: 120 TRDDVDAQIWNALDEEGRCVLLDLGLFVLFNVYCPNETGPERLEYKMTYYQCLAERAHRL 179 Query: 142 LELEEPLIFAGDYNII-----PQPHDCYNPIIWENDACFTLEVRQSFQK--LQNMGFTDA 194 ++ ++ GD NII + +D Sbjct: 180 IQEGRQVMIVGDMNIIRDPIDHCDAEQSIKEHGWDDFHQHPARSWFQSFLAPHGKFHDVG 239 Query: 195 IRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDH 254 D +++ W+ D+ N G+R+D+ + + + A I G SDH Sbjct: 240 RMYHADRKKMFTCWNTLIDARPANYGVRLDYTLATEGILPWIKGADIQADVYG----SDH 295 Query: 255 TPVIVSL 261 P+ + L Sbjct: 296 CPIYIDL 302 >gi|118586338|ref|ZP_01543790.1| exodeoxyribonuclease A [Oenococcus oeni ATCC BAA-1163] gi|290891237|ref|ZP_06554299.1| hypothetical protein AWRIB429_1689 [Oenococcus oeni AWRIB429] gi|118433229|gb|EAV39943.1| exodeoxyribonuclease A [Oenococcus oeni ATCC BAA-1163] gi|290479201|gb|EFD87863.1| hypothetical protein AWRIB429_1689 [Oenococcus oeni AWRIB429] Length = 273 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 59/280 (21%), Positives = 98/280 (35%), Gaps = 27/280 (9%) Query: 4 VTVATWNVNSIRARIHNL----------AAWIKENNPDIICLQETKT--------EDKNF 45 + +WN++S+ A I + I PD +QETK +D+ Sbjct: 1 MNFISWNIDSLNAAIQHKSPRGELTYKTLEKIAAAKPDFFSIQETKLPENGLNKKQDEVL 60 Query: 46 PFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT 105 L + + +++ + I P D T+ Sbjct: 61 EELFPNYLRFVKNSTPPAKKGYAGVMTLAKEAPISYDKPVIDAPDTMDQEGRIVTLEYPD 120 Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165 + N+Y P+ R L + +IF+GD N+ + D N Sbjct: 121 FYLLNVYTPNSGDGLRRLPARGKWD--DQFRHYISDLSERKIVIFSGDLNVAHEEIDLKN 178 Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD-SWSKNKGIRID 224 N A FT + R+ F +L + GF D R H YS+W + + N G RID Sbjct: 179 SSSNHNSAGFTDQEREKFSRLLSAGFIDTWRLQHPKEIAYSWWSQRNRLAKTNNAGWRID 238 Query: 225 HIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 + ++S A + IDT R DH P+ + + + Sbjct: 239 YYIVSNSAKEKIVKTGMIDTGTRA-----DHAPIYLQMKL 273 >gi|15922225|ref|NP_377894.1| exodeoxyribonuclease [Sulfolobus tokodaii str. 7] gi|15623014|dbj|BAB67003.1| 241aa long hypothetical exodeoxyribonuclease [Sulfolobus tokodaii str. 7] gi|199436390|dbj|BAG70946.1| thermostable exonuclease III [Sulfolobus sp. Tu B-1] Length = 241 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 56/263 (21%), Positives = 105/263 (39%), Gaps = 25/263 (9%) Query: 4 VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETL-QSLNYHIETC 60 + + +WNVN ++A R L + + N D I LQE ++ D P + L N Sbjct: 1 MKIVSWNVNGLKAITRKGALESVL---NYDAILLQEIRSSD--LPLDLLMSGFNIASFPA 55 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GV L++ +P I+ L + D + R + I + G+ ++ Sbjct: 56 KKKGYSGVMTLTREKPKSIIKGLNVKEFDEEGRTVTVELEKFY---LINAYFPRAGDGLS 112 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + L +P+I GD+N + + D E + + R Sbjct: 113 RLDFKISFDNKIEEFMDQ---LRRTKPVIICGDFNAVVERRDSSFWDENE--PGLSPKER 167 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + + G+ DA R + T YS+ Y + +RID+ ++S E + + Sbjct: 168 EWMNHILKKGYIDAYRFINPTKIEYSWRSYRFKWKA----MRIDYCLVSEELKDKIRDCK 223 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263 I SDH P+++ +++ Sbjct: 224 ILN-----VSGSDHYPILLEIEV 241 >gi|331241043|ref|XP_003333171.1| hypothetical protein PGTG_14718 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309312161|gb|EFP88752.1| hypothetical protein PGTG_14718 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 358 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 54/265 (20%), Positives = 96/265 (36%), Gaps = 15/265 (5%) Query: 3 VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETC 60 + ++ WNV I A L ++ +PD+I L ETK + + Y + Sbjct: 105 TLRISAWNVCGINACEKKGLKTYLAAEDPDVIILSETKMQAEPDIMHIKHQFRYRYWGGD 164 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 K Y GVAILSK++PIE+V LP + T + IG G+ + Sbjct: 165 ETKGYAGVAILSKHKPIEVVYGLPTATDQSSTKGRIVTLEFSKF-FLIGTYTPNAGDNLK 223 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + D+ + L+ ++P+++ N + + + Sbjct: 224 ---FMDRKKEWNAAFEKYLRELDAKKPVVWGDIRNAA--SNWNKTAGYTQEECDGLNSQL 278 Query: 181 QSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 Q + D R + Y+ Y K G RID ++S + + Sbjct: 279 SPPQDSGHEKLVDVWRELNPDLEGHYT---YRFGCREKGIGWRIDAFIVSQRVFESVKTC 335 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIP 264 I + G SDH P+++ + + Sbjct: 336 EIRQECYG---ASDHVPIVIEIALS 357 >gi|242049990|ref|XP_002462739.1| hypothetical protein SORBIDRAFT_02g031100 [Sorghum bicolor] gi|241926116|gb|EER99260.1| hypothetical protein SORBIDRAFT_02g031100 [Sorghum bicolor] Length = 618 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 60/355 (16%), Positives = 99/355 (27%), Gaps = 77/355 (21%) Query: 3 VVTVATWNVNSIRARIHN---LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 +V + T+NVN +R R+ L + + DIIC QETK ++ + + + Y Sbjct: 1 MVKIVTYNVNGLRPRVAQHGSLRRLLDALDADIICFQETKLSRQDLSADVIMAEGYEAFV 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIE----------------------- 96 +S G S VT E Sbjct: 61 SCNRSSKGRGAYSGVATFCRVTSSFSSQEVALPVAAEEGFTGLQDYAKNSETVGDFIIAM 120 Query: 97 ----------------------ATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRF 134 + + N+Y P + K+ + K Sbjct: 121 PVEEEGLGEITREDLLRVDNEGRCIITDHGHFVLFNIYGPAVEEDDKERVRFKLLFYKIL 180 Query: 135 LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDA 194 + L L + + GD NI P D + F + +R ++ F Sbjct: 181 QKRWEHLLALGKRVFVVGDLNIAPASIDRCDAPPGFEKQMFRVWMRSMLREHGGPFFDAF 240 Query: 195 IRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT---------KP 245 + Y+ ++ + N G RIDHI++S S + Sbjct: 241 RSKHPERTGAYTCFNQKIGAEEYNYGSRIDHILISGSCLHHCDSVEYHNIFCCHVEECEI 300 Query: 246 RGWTK-------------------PSDHTPVIVSL-DIPEPRKKQQDSTSQNMKP 280 K SDH PV + L +IPE ++ P Sbjct: 301 MNHFKRGNSENLSKWKGGRSNKLEGSDHIPVYILLKEIPELPVHNIPPSAARYLP 355 >gi|218515815|ref|ZP_03512655.1| exodeoxyribonuclease III protein [Rhizobium etli 8C-3] Length = 142 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 63/117 (53%), Positives = 87/117 (74%), Gaps = 1/117 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+N ++ARI NL W+K+++PDI+CLQE KT D+ FP +++L YH+ET GQK Sbjct: 1 MKIATWNINGVKARIDNLTQWLKDSDPDIVCLQEIKTIDEGFPRLEIEALGYHVETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL-RIGNLYLPHGNPI 119 +NGVAILSK P E+ LPGD LD QARF+EA FT+ + R+ +YLP+GNP+ Sbjct: 61 GFNGVAILSKSSPSEVNRGLPGDALDEQARFLEAVFTLPDTRILRVCCIYLPNGNPV 117 >gi|300173607|ref|YP_003772773.1| exodeoxyribonuclease III [Leuconostoc gasicomitatum LMG 18811] gi|299887986|emb|CBL91954.1| exodeoxyribonuclease III [Leuconostoc gasicomitatum LMG 18811] Length = 272 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 59/279 (21%), Positives = 112/279 (40%), Gaps = 26/279 (9%) Query: 4 VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPF---ETL 50 + + +WN++SI A + + + I PD+ +QETK + E + Sbjct: 1 MQLISWNIDSINAAVEHKSARGEMTWDVLTTIAARKPDVFAIQETKLKPTGMTKKQSEAI 60 Query: 51 QSL--NYHIETCGQKSYNGVA-ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107 L +YH+ + +G + + + + P T+ Sbjct: 61 AELFPDYHVYLDSSTARSGYSGTMMLTRIEPLSIEFPKIAAPDTMDIEGRIITLEFDNYY 120 Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167 + +Y P+ + R Q L+ ++P+IF+GD N+ + D N Sbjct: 121 VSTVYTPNSGSALARLSARGEWD--DAYRAYIQTLDAKKPVIFSGDMNVAHEEIDLKNFK 178 Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYAD-SWSKNKGIRIDH 225 N A FT + R+ F L + GFTD +R + +Y++W + S N G RID+ Sbjct: 179 TNHNSAGFTNQEREKFTALLDAGFTDTLRMQNPNTPEIYTWWAQISKTSKINNSGWRIDY 238 Query: 226 IMLSPEATSLLHSARI-DTKPRGWTKPSDHTPVIVSLDI 263 ++S + + + DT R DH P+ +++++ Sbjct: 239 YLVSDRIAENVLNTDVLDTGLRQ-----DHAPISLTINL 272 >gi|15672773|ref|NP_266947.1| exodeoxyribonuclease A [Lactococcus lactis subsp. lactis Il1403] gi|12723711|gb|AAK04889.1|AE006312_9 exodeoxyribonuclease A [Lactococcus lactis subsp. lactis Il1403] gi|326406342|gb|ADZ63413.1| exodeoxyribonuclease III [Lactococcus lactis subsp. lactis CV56] Length = 334 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 66/289 (22%), Positives = 108/289 (37%), Gaps = 37/289 (12%) Query: 5 TVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTE---DKNFPFETLQ 51 +WN++S+ A + + + + PD++ +QETK K E L+ Sbjct: 53 KFISWNIDSLNAALTGTSERAALSLAVVKNLAQAQPDVLAIQETKLPSTGPKKAHLEVLE 112 Query: 52 SL--NYHIETCG-----QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 L Y I +K Y+G IL K E V P D T+ Sbjct: 113 ELFKGYKIVWRSSVEPARKGYSGTMILYKETLPEPVITFPEIDAPEPMDAEGRIITLEFP 172 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 + +Y P+ + D R L+ ++P+ GD+N D Sbjct: 173 DFFVTTVYTPNAQEGLTRL--DLRGIWDDNYRNYLTSLDAQKPVFACGDFNAAYTEIDLA 230 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL--------YSFWDYYAD-SW 215 NP N A FT + R+ F +L GFTD R H Y+++ A S Sbjct: 231 NPRGNHNSAGFTDQEREKFGQLLEAGFTDTFRQLHGQVEKFYEEGRSIYTWFAQRAKTSK 290 Query: 216 SKNKGIRIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 N G RID+ ++S + + +D+ R DH P+++ ++ Sbjct: 291 LNNSGWRIDYWLVSNRLAQAVKVSEPLDSGERL-----DHVPILLEFEL 334 >gi|326693809|ref|ZP_08230814.1| exodeoxyribonuclease III [Leuconostoc argentinum KCTC 3773] Length = 272 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 63/277 (22%), Positives = 103/277 (37%), Gaps = 30/277 (10%) Query: 4 VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPF------ 47 + +WN++SI A I + + I PD+ +QETK + Sbjct: 1 MHFISWNIDSINAAIEHKSARGEMTWDVLQKIAAQQPDVFAIQETKLKATGLTKKQATVL 60 Query: 48 -ETLQSLN-YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT 105 E Y + + Y+G IL++ P+ + G ++ T Sbjct: 61 AELFPDYQIYVNASDARSGYSGTMILTRLTPLAVTYPTIGAPGEMDLEGRIITLEFEDFF 120 Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165 + R L+ ++P+IF+GD N+ Q D N Sbjct: 121 VSTVYTPNSGSALARLA----DRGAWDDAYRAYISSLDAQKPVIFSGDMNVAHQEIDLKN 176 Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYAD-SWSKNKGIRI 223 P A FT + R+ F L + GFTD +RA + +Y++W + S N G RI Sbjct: 177 PKTNHKSAGFTDQEREKFTALLSTGFTDTMRAQNPDTPGIYTWWAQISKTSKINNSGWRI 236 Query: 224 DHIMLSPEATSLLHS-ARIDTKPRGWTKPSDHTPVIV 259 D+ ++S + A IDT R DH P+ + Sbjct: 237 DYYLVSDRIADKVTETAVIDTGLRQ-----DHAPISL 268 >gi|330982162|gb|EGH80265.1| exonuclease III [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 155 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 48/120 (40%), Positives = 70/120 (58%), Gaps = 1/120 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+N +RAR H LAA I ++ PD+I LQETK D+ FP +++L YH+ GQK Sbjct: 1 MKIVSFNINGLRARPHQLAALIDKHQPDVIGLQETKVSDEQFPQAEVEALGYHVHFHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122 + GVA+LS+ P+ + GDD + Q RFI T+ N Q + I N Y P G Sbjct: 61 GHYGVALLSRNAPLALHKGFEGDDEESQKRFIWGTYADSNGQPVTIMNGYFPQGESRDHP 120 >gi|125624555|ref|YP_001033038.1| 3'-exo-deoxyribonuclease [Lactococcus lactis subsp. cremoris MG1363] gi|124493363|emb|CAL98337.1| 3'-exo-deoxyribonuclease [Lactococcus lactis subsp. cremoris MG1363] gi|300071349|gb|ADJ60749.1| exodeoxyribonuclease A [Lactococcus lactis subsp. cremoris NZ9000] Length = 285 Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats. Identities = 65/289 (22%), Positives = 108/289 (37%), Gaps = 37/289 (12%) Query: 5 TVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTE---DKNFPFETLQ 51 +WN++S+ A + + + + PD++ +QETK K E L+ Sbjct: 4 KFISWNIDSLNAALTGTSERAALSLAVVKNLAQAQPDVLAIQETKLPSTGPKKAHLEVLE 63 Query: 52 SL--NYHIETCG-----QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 L Y I +K Y+G +L K E V P D T+ Sbjct: 64 ELFKGYKIVWRSSVEPARKGYSGTMVLYKETLPEPVITFPEIDAPEPMDAEGRIITLEFP 123 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 + +Y P+ + D R L+ ++P+ GD+N D Sbjct: 124 DFFVTTVYTPNAQEGLTRL--DLRGIWDDNYRNYLTSLDAQKPVFACGDFNAAYTEIDLA 181 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL--------YSFWDYYAD-SW 215 NP N A FT + R+ F +L GFTD R H Y+++ A S Sbjct: 182 NPRGNHNSAGFTDQEREKFGQLLEAGFTDTFRQLHGQVEKFYEEGRSIYTWFAQRAKTSK 241 Query: 216 SKNKGIRIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 N G RID+ ++S + + +D+ R DH P+++ ++ Sbjct: 242 LNNSGWRIDYWLVSNRLAQAVKVSEPLDSGERL-----DHVPILLEFEL 285 >gi|281491287|ref|YP_003353267.1| exodeoxyribonuclease III [Lactococcus lactis subsp. lactis KF147] gi|281375028|gb|ADA64546.1| Exodeoxyribonuclease III [Lactococcus lactis subsp. lactis KF147] Length = 334 Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats. Identities = 66/289 (22%), Positives = 108/289 (37%), Gaps = 37/289 (12%) Query: 5 TVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTE---DKNFPFETLQ 51 +WN++S+ A + + + + PD++ +QETK K E L+ Sbjct: 53 KFISWNIDSLNAALTGTSERAALSLAVVKNLAQAQPDVLAIQETKLPSTGPKKAHLEVLE 112 Query: 52 SL--NYHIETCG-----QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 L Y I +K Y+G IL K E V P D T+ Sbjct: 113 ELFKGYKIVWRSSVEPARKGYSGTMILYKETLPEPVITFPEIDAPEPMDAEGRIITLEFP 172 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 + +Y P+ + D R L+ ++P+ GD+N D Sbjct: 173 DFFVTTVYTPNAQEGLTRL--DLRGIWDDNYRNYLTSLDAQKPVFACGDFNAAYTEIDLA 230 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL--------YSFWDYYAD-SW 215 NP N A FT + R+ F +L GFTD R H Y+++ A S Sbjct: 231 NPRANHNSAGFTDQEREKFGQLLEAGFTDTFRKLHGQVEKFYEEGRSIYTWFAQRAKTSK 290 Query: 216 SKNKGIRIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 N G RID+ ++S + + +D+ R DH P+++ ++ Sbjct: 291 LNNSGWRIDYWLVSNRLAQAVKVSEPLDSGERL-----DHVPILLEFEL 334 >gi|254283611|ref|ZP_04958579.1| putative exodeoxyribonuclease [gamma proteobacterium NOR51-B] gi|219679814|gb|EED36163.1| putative exodeoxyribonuclease [gamma proteobacterium NOR51-B] Length = 253 Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats. Identities = 53/264 (20%), Positives = 107/264 (40%), Gaps = 17/264 (6%) Query: 4 VTVATWNVNSI-RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC-- 60 + + + V+ + AR + +W+K+ + D+ICLQ+T+ + + + Y+ Sbjct: 1 MRIISLAVDGLETARDAGVFSWLKQQDADVICLQDTRCSEYSLKGDEFFPEGYNAYFWDD 60 Query: 61 -GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 NGVAI K P I+T L + D + +I+A + + + Sbjct: 61 IDDHRRNGVAIYCKAMPKAIMTGLGFPEFDARGLYIQADYQNISIGSLLMPAAAN----- 115 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 ++ +++++ + IF G + + +P D + F+ + Sbjct: 116 DPQGLAERAAFMEQLAAHLQKIRNKRRDFIFCGGWGVAHEPIDAEEAGNRIDIPGFSDKD 175 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R+ L G+ DA RA + +++W D+ G+R D ++S + + + A Sbjct: 176 RRWLNSLYQSGYADAFRAHNSDPDEFTWWPEGDDA----GGVRTDTQIISSDLVAHVDYA 231 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 I T S H PVI+ D+ Sbjct: 232 AIYTA----DTFSSHAPVIIDYDV 251 >gi|298706356|emb|CBJ29365.1| potential endonuclease [Ectocarpus siliculosus] Length = 696 Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats. Identities = 44/303 (14%), Positives = 77/303 (25%), Gaps = 47/303 (15%) Query: 5 TVATWNVNSIR--ARIHN-LAAWIKENNPDIICLQETKTEDKNF-PFETLQSLNYHIETC 60 + TWN+N +R A H + + + N DI+C QE K E ++ YH Sbjct: 25 RILTWNINGLRKVAASHGGVQQLLDQFNADIVCFQEIKITRAGLVEHELARAQGYHGFFN 84 Query: 61 GQKSYNGVAILSKYQPIEIVTH-------------------------------------L 83 K V+ + + Sbjct: 85 HCKLPRKVSYSGVATFVRSESGLKTLASTTSLGDSAFFGSPGSFVGERRLSPDRLAALDS 144 Query: 84 PGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLE 143 G L + + K D + R S+ Sbjct: 145 EGRVLVTDHGHFVLFNVYAPCVSSSSDDEKEKTEDRRAFKRDFLATLEARIFEIRSRGRG 204 Query: 144 LEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHH 203 + + + + + ++ + + D R H Sbjct: 205 VVLVGDLNACASQLDHGFTMTDSEFYASNWSKWIRGMLGLGSPEPPRLVDCFRHLHPDRK 264 Query: 204 -LYSFWDYYADSWSKNKGIRIDHIMLSPEATSL-LHSARIDTKPRGWTKPSDHTPVIVSL 261 ++ W+ + N G RID+I+ + L + I G SDH PV Sbjct: 265 SAFTCWNTQTGARDNNYGTRIDYIIAGTDFADRALRACDIMPDFLG----SDHCPVRARF 320 Query: 262 DIP 264 P Sbjct: 321 AFP 323 >gi|483519|emb|CAA55675.1| orf 208 [Coxiella burnetii] Length = 209 Score = 116 bits (289), Expect = 5e-24, Method: Composition-based stats. Identities = 47/214 (21%), Positives = 82/214 (38%), Gaps = 9/214 (4%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + T N+N IRA W+K DI+CLQETK + + YH Sbjct: 1 MRIITLNLNGIRAAARRGFFDWLKRQKADIVCLQETKACLEITNGDQFHPKGYHCYYHDA 60 Query: 63 KS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + Y+GV I + +P + T L + D + R+I+A F + Sbjct: 61 EKSGYSGVGIYCREKPDRVTTRLGWEHADKEGRYIQADFGSLS-----VASLYMPSGTTG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K ++ R+++ + + I GD+NI+ + D N + + E R Sbjct: 116 EHRQKIKFDFMDRYMKRLKNIVHSKRSFIICGDWNIVHKEIDIKNFKSNQKYSGCLPEER 175 Query: 181 QS-FQKLQNMGFTDAIRATHDTHHLYSFWDYYAD 213 + +G DA R + Y++W Sbjct: 176 AWLDEVFTKVGLVDAFRVVNQKPDQYTWWSSRGR 209 >gi|270010058|gb|EFA06506.1| hypothetical protein TcasGA2_TC009405 [Tribolium castaneum] Length = 983 Score = 116 bits (289), Expect = 6e-24, Method: Composition-based stats. Identities = 52/220 (23%), Positives = 87/220 (39%), Gaps = 10/220 (4%) Query: 6 VATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64 + TWNV+ +R+ + +K + PDI+C+QETK P E Y C Sbjct: 770 ITTWNVDGLRSWLKKGCLDILKYDKPDILCIQETKCAVYKLPEEVKTIEGYETLWCCSDK 829 Query: 65 --YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 Y GV I+ K +P+ ++ + + D + R I + + G + + Sbjct: 830 DGYAGVGIMVKDKPLNVIYGIDSKEHDTEGRCITVEYET---FFVVNVYVPHAGRNLVTL 886 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K + L+ ++P+I GD N+ + D NP N A F++E R Sbjct: 887 P---KRLDWNEQFEKFIKNLDSQKPVIICGDMNVAHKEIDLANPKTNTNSAGFSVEERDG 943 Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGI 221 G+ D R + Y+FW Y ++ N G Sbjct: 944 MTAFLGNGYVDIYRHLYPEKEKAYTFWIYMRNARPNNVGW 983 >gi|2393783|gb|AAD11456.1| AP-endonuclease [Trypanosoma cruzi] Length = 405 Score = 115 bits (288), Expect = 6e-24, Method: Composition-based stats. Identities = 52/299 (17%), Positives = 91/299 (30%), Gaps = 48/299 (16%) Query: 3 VVTVATWNVNSIR--ARIH--NLAAWIKENNPDIICLQETKTEDKNFPFETLQS-LNYHI 57 ++ TWNV +R R + ++E PD +CLQETK + E L Y Sbjct: 105 MLKFITWNVAGLRGLLRKDDQAIQRLLEEEGPDALCLQETKLNPDDPQNEKLGEVPGYRF 164 Query: 58 ETCGQKSYNGVAILSKYQP------IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 ++ G + Y + VT D L + + L Sbjct: 165 VDHVCRAKKGYSGTRTYIKNTAAAEWKTVTVKGFDTLKSPQDVGHSEGDEEGRVLTTYFG 224 Query: 112 YLPHGNP---------------ITSTKYDDKISWIKRFLRFASQRLELEEPLI------- 149 G+ ++ + + +R L Sbjct: 225 TQGKGSETFALALVNTYIPNSGMSLERLPYRCQKFDLRIRQHLCTLGRSCNHDKEEGDAP 284 Query: 150 ------FAGDYNIIPQPHDCYN---PIIWENDACFTLEVRQSFQK--LQNMGFTDAIRAT 198 +AGD N+ + +D Y + + FT E R SF++ Sbjct: 285 SLAGFIWAGDLNVAERDYDRYFAGSYKAMQKCSGFTPEERASFRETLRVANAVDTFRALY 344 Query: 199 HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257 +Y+FW + ++ G R+D+ ++S + G SDH P+ Sbjct: 345 PKAAPVYTFWSARINGRARGLGWRLDYFVVSAALARHVVDCFTMPHVMG----SDHCPL 399 >gi|71655513|ref|XP_816327.1| apurinic/apyrimidinic endonuclease [Trypanosoma cruzi strain CL Brener] gi|70881447|gb|EAN94476.1| apurinic/apyrimidinic endonuclease, putative [Trypanosoma cruzi] Length = 522 Score = 115 bits (288), Expect = 6e-24, Method: Composition-based stats. Identities = 52/299 (17%), Positives = 91/299 (30%), Gaps = 48/299 (16%) Query: 3 VVTVATWNVNSIR--ARIH--NLAAWIKENNPDIICLQETKTEDKNFPFETLQS-LNYHI 57 ++ TWNV +R R + ++E PD +CLQETK + E L Y Sbjct: 222 MLKFITWNVAGLRGLLRKDDQAIQRLLEEEGPDALCLQETKLNPDDPQNEKLGEVPGYRF 281 Query: 58 ETCGQKSYNGVAILSKYQP------IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 ++ G + Y + VT D L + + L Sbjct: 282 VDHVCRAKKGYSGTRTYIKNTAAAEWKTVTVKGFDTLKSPQDVGHSEGDEEGRVLTTYFG 341 Query: 112 YLPHGNP---------------ITSTKYDDKISWIKRFLRFASQRLELEEPLI------- 149 G+ ++ + + +R L Sbjct: 342 TQGKGSETFALALVNTYIPNSGMSLERLPYRCQKFDLRIRQHLCTLGRSCNHDKEEGDAP 401 Query: 150 ------FAGDYNIIPQPHDCYN---PIIWENDACFTLEVRQSFQK--LQNMGFTDAIRAT 198 +AGD N+ + +D Y + + FT E R SF++ Sbjct: 402 SLAGFIWAGDLNVAERDYDRYFAGSYKAMQKCSGFTPEERASFRETLRVANAVDTFRALY 461 Query: 199 HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257 +Y+FW + ++ G R+D+ ++S + G SDH P+ Sbjct: 462 PKAAPVYTFWSARINGRARGLGWRLDYFVVSAALARHVVDCFTMPHVMG----SDHCPL 516 >gi|322826414|gb|EFZ31039.1| apurinic/apyrimidinic endonuclease, putative [Trypanosoma cruzi] Length = 419 Score = 115 bits (287), Expect = 8e-24, Method: Composition-based stats. Identities = 51/299 (17%), Positives = 89/299 (29%), Gaps = 48/299 (16%) Query: 3 VVTVATWNVNSIR--ARIHN--LAAWIKENNPDIICLQETKTEDKNFP-FETLQSLNYHI 57 ++ TWNV +R R + ++E PD +CLQETK + + + Y Sbjct: 119 MLKFITWNVAGLRGLLRKDGQAIQRLLEEERPDALCLQETKLNPDDPQNVKLGEVPGYCF 178 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLP------GDDLDVQARFIEATFTINTQTLRIGNL 111 ++ G + Y T D L + + L Sbjct: 179 VDHVCRAKKGYSGTRTYIKNTAATEWKTVTVKGFDTLKSPQDVGHSDGDEEGRVLTTYFG 238 Query: 112 YLPHGNP---------------ITSTKYDDKISWIKRFLRFASQRLELEEPL-------- 148 GN ++ + + +R L Sbjct: 239 TQGKGNETFALALVNTYIPNSGMSLERLPYRCQKFDLRIRQHLCALGRSYNHGKEEGDAP 298 Query: 149 -----IFAGDYNIIPQPHDCYN---PIIWENDACFTLEVRQSFQK--LQNMGFTDAIRAT 198 I+AGD N+ + +D Y + + FT E R SF++ Sbjct: 299 SLAGFIWAGDLNVAERDYDRYFAGSYKAMQKCSGFTPEERASFRETLRVANAVDTFRALY 358 Query: 199 HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257 +Y+FW + + G R+D+ ++S + G SDH P+ Sbjct: 359 PKAAPVYTFWSARINGRDRGLGWRLDYFVVSAALARHVVDCFTMPHVMG----SDHCPL 413 >gi|159042300|ref|YP_001541552.1| exodeoxyribonuclease III Xth [Caldivirga maquilingensis IC-167] gi|157921135|gb|ABW02562.1| exodeoxyribonuclease III Xth [Caldivirga maquilingensis IC-167] Length = 237 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 63/259 (24%), Positives = 106/259 (40%), Gaps = 25/259 (9%) Query: 7 ATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE--TCGQK 63 +WNVN IR+ + DII LQE ++ D P + L S+ +++ +K Sbjct: 1 MSWNVNGIRSISRKGALRVFN--DFDIILLQEIRSSD--LPLDLL-SMGFNVYGFPAVRK 55 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 Y+GV LS+ +PI ++ + D D + R I I + G+ ++ Sbjct: 56 GYSGVLTLSRVEPINVIRGIGVKDFDDEGRVISIELP---DFYVINAYFPRAGDDLSRLS 112 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + R + + L + +P+I GD+N + D T RQ Sbjct: 113 F---KLVFNRSIEKFTLELRMRKPVIICGDFNAVYSRRDSSFWDDNH--PGLTPLERQWL 167 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + GFTD R H YS+ Y + K +RID+ ++S E T+ + A I Sbjct: 168 SEFIGKGFTDTFRLIHPNEIKYSWRSYR----DRGKAMRIDYCLVSSELTNRVVDADILD 223 Query: 244 KPRGWTKPSDHTPVIVSLD 262 SDH P+++ + Sbjct: 224 TE-----GSDHYPILLVIK 237 >gi|168059759|ref|XP_001781868.1| predicted protein [Physcomitrella patens subsp. patens] gi|162666675|gb|EDQ53323.1| predicted protein [Physcomitrella patens subsp. patens] Length = 591 Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats. Identities = 69/360 (19%), Positives = 109/360 (30%), Gaps = 83/360 (23%) Query: 4 VTVATWNVNSIRARI---HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 + + T+NV S+RAR+ L +++ DIICLQETK + E + Y Sbjct: 1 MRIVTYNVFSLRARLVPPRTLKSFLDSLESDIICLQETKLTRQELTAEIAVADGYESFFS 60 Query: 61 GQK-------SYNGVAILSK---------------------------------YQPIEIV 80 + Y+GVA + + Sbjct: 61 CTRTVSKGRVRYSGVATFCRTPTAVPVAADEGFTGAQSSTHQTNYKNDHARVGCYEEVLN 120 Query: 81 THLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQ 140 +Q + + + + NLY P P +Y+ K+ + + Sbjct: 121 MENMSRQDLLQLDWEGRCLVTDHGSFVLFNLYGPSVGPDNEERYEFKLRFYRALQNRWEG 180 Query: 141 RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN-MGFTDAIRATH 199 L+ +I GD+NI P P D + + ++ Q N F D R H Sbjct: 181 LLKNGRRVIAVGDFNISPFPIDSCHSDSNPDFDKSSIRQWFRSQLRANGGPFVDVFREIH 240 Query: 200 D-THHLYSFWDYYADSWSKNKGIRIDHIML------------SPEATSL----------L 236 Y+FW+ + S N G R+D I+ S + Sbjct: 241 PIREGAYTFWNQMSGSEEFNYGTRLDLIIAAGGCFHQVRSEESNSLLKAEESHHFGTCEV 300 Query: 237 HSARIDTKP----------RGWTK-----PSDHTPVIVSLDIPEP-RKKQQDSTSQNMKP 280 I + RG K SDH PV V L P + + P Sbjct: 301 EDCDILLEFKRFKADSVPRRGGEKTQKLDGSDHVPVYVQLRPQPPLEQHDVPPLAARFMP 360 >gi|313122838|ref|YP_004033097.1| exonuclease iii [Lactobacillus delbrueckii subsp. bulgaricus ND02] gi|312279401|gb|ADQ60120.1| Exonuclease III [Lactobacillus delbrueckii subsp. bulgaricus ND02] Length = 265 Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats. Identities = 53/262 (20%), Positives = 102/262 (38%), Gaps = 20/262 (7%) Query: 15 RARI-HNLAAWIKENNPDIICLQETKTEDKNFPF-------ETLQSLNYHIETCGQKSY- 65 RA + + + + +PD++ LQETK + ++ + + + Sbjct: 11 RAEMTRGVLKNLHDLDPDVLALQETKLPASGPSKKHQAALADLFPEYDFVWRSSMEPARK 70 Query: 66 -NGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124 + + ++ V P F T+ + +Y P+ Sbjct: 71 GYAGTMFLYKKGLDPVVTRPEIGAPEPMDFEGRILTLEFPDFYVTQVYTPNAGNGLVRLG 130 Query: 125 DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ 184 D + + R + L+ ++P++ +GD+N Q D +P + A FT E R F Sbjct: 131 DRQ--EWDKCYRAYLEELDKKKPVLASGDFNAAYQEIDLKHPENNHHSAGFTDEERAGFG 188 Query: 185 KLQNMGFTDAIRATH-DTHHLYSFWDYY-ADSWSKNKGIRIDHIMLSPEATSLLHSAR-I 241 +L GFTD R H +YS+W + + N G RID+ ++S + + I Sbjct: 189 QLLAAGFTDTFRQIHGQVEGVYSWWAQRVRTAKANNSGWRIDYWLVSNRLADQVEKSEMI 248 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 +T R DH P+++ + + Sbjct: 249 ETGERA-----DHCPILLEIKL 265 >gi|322489986|emb|CBZ25246.1| AP-endonuclease [Leishmania mexicana MHOM/GT/2001/U1103] Length = 447 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 51/316 (16%), Positives = 85/316 (26%), Gaps = 65/316 (20%) Query: 2 SVVTVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTEDKNFPFETLQS--LNY 55 + TWNV +R + L A+++ PDI+CLQETK Y Sbjct: 128 RMYKFITWNVAGLRGLLKKNASALRAFMEAEQPDILCLQETKLNVDEAEANAALGVVDGY 187 Query: 56 HIETCGQKSYNGVAILSKYQP--IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 G + Y + + + Sbjct: 188 SFVDHPCAFKRGYSGTRTYMKNSTTVKRLHARCTRGFALPSEPQADAAAGSPVLVEGAGD 247 Query: 114 PHGNPITST-----------------------------KYDDKISWIKRFLRFASQRLEL 144 G +T+ + +I +R RL+ Sbjct: 248 EEGRVLTTFLSPDPGSGSSSSRIALVNTYVANSGMGLTRLPYRIQSFDPNMREYLHRLDT 307 Query: 145 E-------------------EPLIFAGDYNIIPQPHDCYNPIIWENDACF----TLEVRQ 181 I+AGD N+ + +D Y +++ E Sbjct: 308 WATENAAVPSAAATGGDSSPHGFIWAGDLNVAERDYDRYYAGTFKSMQECSGFAPEERMS 367 Query: 182 SFQKLQNMGFTDAIRATHDTHHL-YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + +Q D R + YSFW + +N G R+D+ ++S S + Sbjct: 368 FRETMQRTNSVDVFRQLYPQAGPVYSFWSQRINGRPRNLGWRLDYFVVSSRLASYVVDCF 427 Query: 241 IDTKPRGWTKPSDHTP 256 G SDH P Sbjct: 428 PMPTVMG----SDHCP 439 >gi|72393161|ref|XP_847381.1| apurinic/apyrimidinic endonuclease [Trypanosoma brucei TREU927] gi|62175708|gb|AAX69838.1| apurinic/apyrimidinic endonuclease, putative [Trypanosoma brucei] gi|70803411|gb|AAZ13315.1| apurinic/apyrimidinic endonuclease, putative [Trypanosoma brucei brucei strain 927/4 GUTat10.1] Length = 396 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 55/303 (18%), Positives = 96/303 (31%), Gaps = 52/303 (17%) Query: 3 VVTVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTEDKNFPFETLQSL-NYHI 57 ++ TWNV +R + + ++E +PD +CLQETK + E L + Y Sbjct: 92 MLKFITWNVAGLRGLLKKDSEAIKKLLEEEHPDALCLQETKLNVGDKGNEALGVVQGYDF 151 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLP--------------------GDDLDVQARFIEA 97 + G + Y E+ GDD Sbjct: 152 VDHPCHAKKGYSGTRTYIKKEVAEKWNAVFVKGFGGPNGVDDDKQENGDDEGRVLTTYFG 211 Query: 98 TFTINTQTLRIGNLYLPHGNP-ITSTKYDDKISWIKRFLRFASQRLELEEPL-------- 148 T R+ + N + + + +R +L+ Sbjct: 212 GDQGCENTFRLALVNTYVPNSGMDLARLPYRHKTFDVKMRNYLCKLDAAAMKVNGTCNNV 271 Query: 149 ---------IFAGDYNIIPQPHDCYN---PIIWENDACFTLEVRQ-SFQKLQNMGFTDAI 195 I+AGD N+ + +D Y + + FT E R + L+ + D Sbjct: 272 KDAQPPTGVIWAGDLNVAERDYDRYFAGTFAAMQKCSGFTPEERTSFRETLRAVNAVDTF 331 Query: 196 RATHDTHHL-YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDH 254 R + Y+FW + ++ G R+D+ ++S + G SDH Sbjct: 332 RELYPRAAPVYTFWSARINGRARGLGWRLDYFVVSAALAGRVVDCFTMPMIMG----SDH 387 Query: 255 TPV 257 PV Sbjct: 388 CPV 390 >gi|58036733|emb|CAF21852.1| AP endonuclease 1 homologue [Trypanosoma brucei brucei] gi|261330625|emb|CBH13610.1| apurinic/apyrimidinic endonuclease, putative [Trypanosoma brucei gambiense DAL972] Length = 396 Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats. Identities = 55/303 (18%), Positives = 96/303 (31%), Gaps = 52/303 (17%) Query: 3 VVTVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTEDKNFPFETLQSL-NYHI 57 ++ TWNV +R + + ++E +PD +CLQETK + E L + Y Sbjct: 92 MLKFITWNVAGLRGLLKKDSEAIKKLLEEEHPDALCLQETKLNVGDKGNEALGVVQGYDF 151 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLP--------------------GDDLDVQARFIEA 97 + G + Y E+ GDD Sbjct: 152 VDHPCHAKKGYSGTRTYIKKEVAEKWNAVFVKGFGGPNGVDDDKQENGDDEGRVLTTYFG 211 Query: 98 TFTINTQTLRIGNLYLPHGNP-ITSTKYDDKISWIKRFLRFASQRLELEEPL-------- 148 T R+ + N + + + +R +L+ Sbjct: 212 GDQGCENTFRLALVNTYVPNSGMDLARLPYRHKTFDVKMRNYLCKLDAAAMKANGTCNNV 271 Query: 149 ---------IFAGDYNIIPQPHDCYN---PIIWENDACFTLEVRQ-SFQKLQNMGFTDAI 195 I+AGD N+ + +D Y + + FT E R + L+ + D Sbjct: 272 KDAQPPTGVIWAGDLNVAERDYDRYFAGTFAAMQKCSGFTPEERTSFRETLRAVNAVDTF 331 Query: 196 RATHDTHHL-YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDH 254 R + Y+FW + ++ G R+D+ ++S + G SDH Sbjct: 332 RELYPRAAPVYTFWSARINGRARGLGWRLDYFVVSAALAGRVVDCFTMPMIMG----SDH 387 Query: 255 TPV 257 PV Sbjct: 388 CPV 390 >gi|71423692|ref|XP_812538.1| apurinic/apyrimidinic endonuclease [Trypanosoma cruzi strain CL Brener] gi|70877328|gb|EAN90687.1| apurinic/apyrimidinic endonuclease [Trypanosoma cruzi] Length = 401 Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats. Identities = 51/299 (17%), Positives = 90/299 (30%), Gaps = 48/299 (16%) Query: 3 VVTVATWNVNSIR--ARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQS-LNYHI 57 ++ TWNV +R R + ++E PD +CLQETK + L Y Sbjct: 101 MLKFITWNVAGLRGLLRKDGQAIQRLLEEERPDALCLQETKLNPDDPQNGKLGEVPGYCF 160 Query: 58 ETCGQKSYNGVAILSKYQP------IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 ++ G + Y + VT L + + L Sbjct: 161 VDHVCRAKKGYSGTRTYIKNTAAAEWKTVTVKGFGTLKSPQDVGHSDGDEEGRVLTTYFG 220 Query: 112 YLPHGNP---------------ITSTKYDDKISWIKRFLRFASQRLELEEPL-------- 148 G+ ++ + + +R L Sbjct: 221 TQGKGSETFALALVNTYIPNSGMSLERLPYRCQKFDLRIRQHLCALGRSYNHGKEEGDAP 280 Query: 149 -----IFAGDYNIIPQPHDCYN---PIIWENDACFTLEVRQSFQK--LQNMGFTDAIRAT 198 I+AGD N+ + +D Y + + FT E R SF++ Sbjct: 281 SLAGFIWAGDLNVAERDYDRYFAGSYKAMQKCSGFTPEERASFRETLRVANAVDTFRALY 340 Query: 199 HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257 +Y+FW + ++ G R+D+ ++S + G SDH P+ Sbjct: 341 PKAAPVYTFWSARINGRARGLGWRLDYFVVSAALARHVVDCFTMPHVMG----SDHCPL 395 >gi|154334845|ref|XP_001563669.1| AP-endonuclease [Leishmania braziliensis MHOM/BR/75/M2904] gi|134060691|emb|CAM37706.1| apurinic/apyrimidinic endonuclease-redox protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 444 Score = 112 bits (281), Expect = 4e-23, Method: Composition-based stats. Identities = 52/314 (16%), Positives = 91/314 (28%), Gaps = 64/314 (20%) Query: 3 VVTVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTEDKNFPFETLQS--LNYH 56 + TWNV +R + L +I+ PD++CLQETK + Y Sbjct: 127 MYKFITWNVAGLRGLLKKNASVLREFIEAEKPDVLCLQETKLNTDEADANAVLGVVDGYT 186 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQ------------------------- 91 G + Y Sbjct: 187 FVDHPCAFKRGYSGTRTYMKNSTFVQQLHARCTRGFILPSTPQADAATGSPVLVEGAGDE 246 Query: 92 -----ARFIEATFTINTQTLRIGNLYLPHGNP-ITSTKYDDKISWIKRFLRFASQRLELE 145 F+ + T ++ +LRI + N + + +I +R +L++ Sbjct: 247 EGRVLTTFLSSDSTSSSPSLRIALVNTYVANSGMGLARLPYRIQSFDPNMREYLHQLDVW 306 Query: 146 ------------------EPLIFAGDYNIIPQPHDCYN----PIIWENDACFTLEVRQSF 183 I+AGD N+ + +D Y + E+ E Sbjct: 307 ATPNAAVPSVAAGSGGSPYGFIWAGDLNVAERDYDRYYAGTFKSMQESSGFAPEERMSFR 366 Query: 184 QKLQNMGFTDAIRATHDTHHL-YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 + ++ D R + YSFW + +N G R+D+ ++S + Sbjct: 367 ETMRRTSSVDVFRQLYPQAGPVYSFWSQRINGRLRNLGWRLDYFIVSSRLALYVVDCFPM 426 Query: 243 TKPRGWTKPSDHTP 256 G SDH P Sbjct: 427 PTVMG----SDHCP 436 >gi|255075203|ref|XP_002501276.1| predicted protein [Micromonas sp. RCC299] gi|226516540|gb|ACO62534.1| predicted protein [Micromonas sp. RCC299] Length = 353 Score = 112 bits (281), Expect = 4e-23, Method: Composition-based stats. Identities = 53/274 (19%), Positives = 89/274 (32%), Gaps = 18/274 (6%) Query: 7 ATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 +WNV +RA + L +PD+IC+QE K +D + + E Sbjct: 82 ISWNVAGLRALLDKNSHTLRRIADVESPDVICVQEHKLQDVHVNDAVRRLGEILPEYRTV 141 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K A + +V + T + T+ + Sbjct: 142 KFAVSTAKKGYSGLLSVVEGMGDFRCGYTDEGRVLTLEFDAFTMVFTYVPNSGQKLERLE 201 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF---TLEV 179 K R +P+I GD N+ D YN E Sbjct: 202 YRLKKWDVDFRAYLAHLDGETRGKPVIVGGDLNVGHLDEDIYNVDAPHTKKQCGLTPEER 261 Query: 180 RQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS---- 234 + L+++ D RA H YS+W A + +N+G+R+D+ S S Sbjct: 262 SSWTRTLESVKLVDTFRAFHPNARGWYSYWSGRAGNKPRNRGLRLDYFAASERIMSSGRD 321 Query: 235 ----LLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 + + + K + SDH PV ++L + Sbjct: 322 GGGVRVVDSFVLDKL--VAEASDHAPVGITLALD 353 >gi|242219979|ref|XP_002475762.1| predicted protein [Postia placenta Mad-698-R] gi|220725034|gb|EED79041.1| predicted protein [Postia placenta Mad-698-R] Length = 415 Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats. Identities = 43/284 (15%), Positives = 73/284 (25%), Gaps = 45/284 (15%) Query: 5 TVATWNVNSIRARIH----------------------NLAAWIKENNPDIICLQETK-TE 41 +ATWN+ + A +++ + D++ L ETK Sbjct: 148 RIATWNICGLAAAQKKVRVARAVHVHAGLLTAGVCAQGFKYYVEAEDADVLVLTETKPVP 207 Query: 42 DK---NFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT 98 + E L L H + K S Y I G L E Sbjct: 208 VSVLVDLGEEDLLELPGHPDPGSVKGRILTLEFSNYYLIGTYVVNAGQGLKTLEAKKE-- 265 Query: 99 FTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP 158 + D + I + + Sbjct: 266 --------------WNVHFTKYMRELDMRKPVIWTGDLNVAPTELDLANPKTNWNKTPGY 311 Query: 159 QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN 218 + N + S F D R H Y+++ Y + K Sbjct: 312 TEVETSAFARILNPSSAAASDAASQDDAAPGKFVDVWRKLHPDDRHYTYFSYRFNCRMKG 371 Query: 219 KGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 G R+D ++S + I ++ G SDH PV + ++ Sbjct: 372 IGWRLDMFVVSERIEERVKMCEIRSEIYG---ASDHCPVALEIE 412 >gi|19074386|ref|NP_585892.1| CLASS II (DNA LYASE) APURINIC APYRIMIDIC ENDONUCLEASE [Encephalitozoon cuniculi GB-M1] gi|19069028|emb|CAD25496.1| CLASS II (DNA LYASE) APURINIC APYRIMIDIC ENDONUCLEASE [Encephalitozoon cuniculi GB-M1] Length = 338 Score = 112 bits (279), Expect = 6e-23, Method: Composition-based stats. Identities = 49/305 (16%), Positives = 97/305 (31%), Gaps = 50/305 (16%) Query: 4 VTVATWNVNSIRA---------RIHNLAAWIKE-NNPDIICLQETKTEDKNFPFETLQSL 53 + + ++NVN IR+ R+ ++K DI+C+QET+ + E Sbjct: 18 MRITSFNVNGIRSFSKYVMKSCRL-RFNEYVKNILRADILCVQETRGREGAL-GEFHSLR 75 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG---- 109 +Y T K+ + + +S ++ D + T + L + Sbjct: 76 DYITFTNTNKTNSSRSGVSTMVSKKLYCRGVLDSPFAEDGRSLLTDHGEFKVLNLYFPFF 135 Query: 110 ------NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP--- 160 + G ++ I F + ++ ++ I + Sbjct: 136 DESSERDKSEVIGFYDAIGEFIRGHDNIIMCGDFNAVYSIIDHYQFYSELLRIQRKDRPG 195 Query: 161 ---------------------HDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH 199 ++ Y E+ T + + + + DA RA Sbjct: 196 LEEGAKERRRARKSPTRLELPYEFYAEDALESYLLETEQRKWLRSLIDGGEYIDAYRALC 255 Query: 200 DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 Y+ W+ + +N G RID+I++ + L I + G SDH PV Sbjct: 256 KRPESYTCWNTMLNLRPRNLGTRIDYILIPARFLNRLKDCDIQPEIHG----SDHCPVYA 311 Query: 260 SLDIP 264 +D Sbjct: 312 EIDFD 316 >gi|226326256|ref|ZP_03801774.1| hypothetical protein PROPEN_00098 [Proteus penneri ATCC 35198] gi|225205334|gb|EEG87688.1| hypothetical protein PROPEN_00098 [Proteus penneri ATCC 35198] Length = 130 Score = 112 bits (279), Expect = 7e-23, Method: Composition-based stats. Identities = 46/118 (38%), Positives = 66/118 (55%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A I+++ PD+I LQETK D FP +T+ +L YH+ GQK Sbjct: 1 MKFVSFNINGLRARPHQLEAIIEKHQPDVIGLQETKVHDDMFPLDTVGALGYHVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 + GVA+L+K +P+ + P DD D Q R I A L + N Y P G Sbjct: 61 GHYGVALLTKEKPVAVRKGFPSDDDDAQRRMIMADIETPAGLLTVMNGYFPQGESRDH 118 >gi|322497972|emb|CBZ33047.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 447 Score = 111 bits (278), Expect = 8e-23, Method: Composition-based stats. Identities = 51/316 (16%), Positives = 89/316 (28%), Gaps = 65/316 (20%) Query: 2 SVVTVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTE----DKNFPFETLQSL 53 + TWNV +R + L A+++ PD++CLQETK D N + Sbjct: 128 RMYKFITWNVAGLRGLLKKNASALRAFMEAEKPDVLCLQETKLNVDEADANATLGVVDGY 187 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 ++ C K + + + Sbjct: 188 SFVDHPCAFKRGYSGTRTYMKNSTTVKRLHARCTRGFALPSEPQAGAAAGSPVLVEGAGD 247 Query: 114 PHGNPITST-----------------------------KYDDKISWIKRFLRFASQRLEL 144 G +T+ + ++ +R QRL+ Sbjct: 248 EEGRVLTTFLSPDPDSASSSSRIALVNTYVANSGMGLTRLPYRVQSFDPSMREYLQRLDT 307 Query: 145 E-------------------EPLIFAGDYNIIPQPHDCYNPIIWENDACF----TLEVRQ 181 I+AGD N+ + +D Y +++ E Sbjct: 308 WATENAGVPSAAAKGGDSSPHGFIWAGDLNVAERDYDRYYAGTFKSMQECSGFAPEERIS 367 Query: 182 SFQKLQNMGFTDAIRATHDTHHL-YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + +Q D R + YSFW + +N G R+D+ ++S S + Sbjct: 368 FRETMQRTNSVDVFRQLYPHAGPVYSFWSQRINGRPRNLGWRLDYFVVSSRLASYVVDCF 427 Query: 241 IDTKPRGWTKPSDHTP 256 G SDH P Sbjct: 428 PMPTVMG----SDHCP 439 >gi|321399241|emb|CBZ08543.1| apurinic/apyrimidinic endonuclease-redox protein [Leishmania infantum JPCM5] Length = 447 Score = 111 bits (278), Expect = 8e-23, Method: Composition-based stats. Identities = 51/316 (16%), Positives = 89/316 (28%), Gaps = 65/316 (20%) Query: 2 SVVTVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTE----DKNFPFETLQSL 53 + TWNV +R + L A+++ PD++CLQETK D N + Sbjct: 128 RMYKFITWNVAGLRGLLKKNASALRAFMEAEKPDVLCLQETKLNVDEADANATLGVVDGY 187 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 ++ C K + + + Sbjct: 188 SFVDHPCAFKRGYSGTRTYMKNSTTVKRLHARCTRGFALPSEPQAGAAAGSPVLVEGAGD 247 Query: 114 PHGNPITST-----------------------------KYDDKISWIKRFLRFASQRLEL 144 G +T+ + ++ +R QRL+ Sbjct: 248 EEGRVLTTFLSPDPDSASSSSRIALVNTYVANSGMGLTRLPYRVQSFDPSMREYLQRLDT 307 Query: 145 E-------------------EPLIFAGDYNIIPQPHDCYNPIIWENDACF----TLEVRQ 181 I+AGD N+ + +D Y +++ E Sbjct: 308 WATENAAVPSAAAKGGDSSPHGFIWAGDLNVAERDYDRYYAGTFKSMQECSGFAPEERIS 367 Query: 182 SFQKLQNMGFTDAIRATHDTHHL-YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + +Q D R + YSFW + +N G R+D+ ++S S + Sbjct: 368 FRETMQRTNSVDVFRQLYPHAGPVYSFWSQRINGRPRNLGWRLDYFVVSSRLASYVVDCF 427 Query: 241 IDTKPRGWTKPSDHTP 256 G SDH P Sbjct: 428 PMPTVMG----SDHCP 439 >gi|218506516|ref|ZP_03504394.1| exodeoxyribonuclease III protein [Rhizobium etli Brasil 5] Length = 149 Score = 111 bits (278), Expect = 9e-23, Method: Composition-based stats. Identities = 60/144 (41%), Positives = 91/144 (63%) Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 ++ K+ W +R +A++ LE+E P I AGD+N++P D Y P W +DA F EVR+++ Sbjct: 4 FEYKLRWFRRLSAYAAELLEIEVPSILAGDFNVMPTEIDVYKPERWLDDALFRPEVRKAY 63 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +L G+TDA+R H +Y+FW Y+ +S+ ++ G+RIDH++LSP L SA + Sbjct: 64 AQLVAQGWTDAVRHLHPGERIYTFWKYWRNSFERDAGLRIDHLLLSPTVAPWLRSACVRR 123 Query: 244 KPRGWTKPSDHTPVIVSLDIPEPR 267 KPRGW SDH PV++ L IP Sbjct: 124 KPRGWEHTSDHAPVMIELGIPAAE 147 >gi|158428909|pdb|2J63|A Chain A, Crystal Structure Of Ap Endonuclease Lmap From Leishmania Major gi|158428910|pdb|2J63|B Chain B, Crystal Structure Of Ap Endonuclease Lmap From Leishmania Major Length = 467 Score = 111 bits (278), Expect = 9e-23, Method: Composition-based stats. Identities = 50/316 (15%), Positives = 88/316 (27%), Gaps = 65/316 (20%) Query: 2 SVVTVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTE----DKNFPFETLQSL 53 + TWNV +R + L A+++ PD++CLQETK D N + Sbjct: 148 RMYKFITWNVAGLRGLLKKNASALRAFMEAEKPDVLCLQETKLNVDEADANATLGVVDGY 207 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 ++ C K + + + Sbjct: 208 SFVDHPCAFKRGYSGTRTYMKNSTTVKGLHARCTRGFALPSEPQADAAAGSRVLVEGAGD 267 Query: 114 PHGNPITST-----------------------------KYDDKISWIKRFLRFASQRLEL 144 G +T+ + ++ +R RL+ Sbjct: 268 EEGRVLTTFLSPDPDSASSSSRIALVNTYVANSGMGLTRLPYRVQSFDPSMREYLHRLDT 327 Query: 145 E-------------------EPLIFAGDYNIIPQPHDCYNPIIWENDACF----TLEVRQ 181 I+AGD N+ + +D Y +++ E Sbjct: 328 WATENAAVPSAAAMGSGSSPHGFIWAGDLNVAERDYDRYYAGTFKSMQECSGFAPEERMS 387 Query: 182 SFQKLQNMGFTDAIRATHDTHHL-YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + +Q D R + YSFW + +N G R+D+ ++S S + Sbjct: 388 FRETMQRTNSVDIFRQLYPQAGPVYSFWSQRINGRPRNLGWRLDYFVVSSRLASYVVDCF 447 Query: 241 IDTKPRGWTKPSDHTP 256 G SDH P Sbjct: 448 PMPTVMG----SDHCP 459 >gi|157867185|ref|XP_001682147.1| AP-endonuclease; apurinic/apyrimidinic endonuclease-redox protein [Leishmania major] gi|2393785|gb|AAD11457.1| AP-Endonuclease [Leishmania major] gi|68125599|emb|CAJ03609.1| apurinic/apyrimidinic endonuclease-redox protein [Leishmania major strain Friedlin] Length = 447 Score = 111 bits (278), Expect = 9e-23, Method: Composition-based stats. Identities = 50/316 (15%), Positives = 88/316 (27%), Gaps = 65/316 (20%) Query: 2 SVVTVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTE----DKNFPFETLQSL 53 + TWNV +R + L A+++ PD++CLQETK D N + Sbjct: 128 RMYKFITWNVAGLRGLLKKNASALRAFMEAEKPDVLCLQETKLNVDEADANATLGVVDGY 187 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 ++ C K + + + Sbjct: 188 SFVDHPCAFKRGYSGTRTYMKNSTTVKGLHARCTRGFALPSEPQADAAAGSRVLVEGAGD 247 Query: 114 PHGNPITST-----------------------------KYDDKISWIKRFLRFASQRLEL 144 G +T+ + ++ +R RL+ Sbjct: 248 EEGRVLTTFLSPDPDSASSSSRIALVNTYVANSGMGLTRLPYRVQSFDPSMREYLHRLDT 307 Query: 145 E-------------------EPLIFAGDYNIIPQPHDCYNPIIWENDACF----TLEVRQ 181 I+AGD N+ + +D Y +++ E Sbjct: 308 WATENAAVPSAAAMGSGSSPHGFIWAGDLNVAERDYDRYYAGTFKSMQECSGFAPEERMS 367 Query: 182 SFQKLQNMGFTDAIRATHDTHHL-YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + +Q D R + YSFW + +N G R+D+ ++S S + Sbjct: 368 FRETMQRTNSVDIFRQLYPQAGPVYSFWSQRINGRPRNLGWRLDYFVVSSRLASYVVDCF 427 Query: 241 IDTKPRGWTKPSDHTP 256 G SDH P Sbjct: 428 PMPTVMG----SDHCP 439 >gi|70605975|ref|YP_254845.1| exonuclease [Sulfolobus acidocaldarius DSM 639] gi|68566623|gb|AAY79552.1| exonuclease [Sulfolobus acidocaldarius DSM 639] Length = 241 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 63/261 (24%), Positives = 104/261 (39%), Gaps = 24/261 (9%) Query: 4 VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFE-TLQSLNYHIETC 60 + + +WNVN I+A R L I + D+I LQE +T + P + L N Sbjct: 1 MKILSWNVNGIKAILRKGALQPVIN--DYDVIMLQEIRTNE--IPLDIALSGSNLFPFPS 56 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +K Y+GV +SK +P+ ++ L ++ D + R + I + G+ + Sbjct: 57 KKKGYSGVLTISKIKPLSVIKGLGINEFDEEGRVLTIE---LDDYFIINAYFPRAGDDLN 113 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 Y K L +P+I GD N+ D E + T E R Sbjct: 114 RLDYKIKFDLEIEKFMLE---LRKRKPVILCGDLNVARDKIDSTFWD--EKEPGLTSEER 168 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 K+ + F D R + YS+ Y K K +RID+ ++S E + ++ Sbjct: 169 GWINKILSTDFVDTYRFINGNKIEYSWRSYL----EKWKAMRIDYCIVSSEIKDRIKDSK 224 Query: 241 IDTKPRGWTKPSDHTPVIVSL 261 I + SDH PV + + Sbjct: 225 IIK-----IEGSDHYPVYLEI 240 >gi|303389730|ref|XP_003073097.1| exodeoxyribonuclease III [Encephalitozoon intestinalis ATCC 50506] gi|303302241|gb|ADM11737.1| exodeoxyribonuclease III [Encephalitozoon intestinalis ATCC 50506] Length = 331 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 47/302 (15%), Positives = 77/302 (25%), Gaps = 49/302 (16%) Query: 3 VVTVATWNVNSIRA---------RIHNLAAWIKEN-NPDIICLQETKTEDKNFPFETLQS 52 ++ + ++NVN IR+ R+ ++KE DI+C+QET+ S Sbjct: 13 LMRITSFNVNGIRSFSKYIMKSHRL-RFNDYVKETLKADILCVQETRGNKNAL--NEFHS 69 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHL-----------------PGDDLDVQARFI 95 L +I N + + GD + F Sbjct: 70 LKDYITFTSTNKRNSGRSGVSTIVSKKLYCRGILPSPFSEEGRSLLTDHGDYKVLNLYFP 129 Query: 96 EATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYN 155 + Y G I + E L Sbjct: 130 FFDENSGKDKSEVIKFYNEVGRFIRMHENMVICGDFNAVYSIVDHYQFYNELLRIQRMGR 189 Query: 156 IIPQPHDCYNPIIWENDACFTLEV---------------RQSFQKLQNMGFTDAIRATHD 200 + + + + D R H Sbjct: 190 TGWTKETRRMKKCPSKTELPYEFCSEDALEAYFFEVQQRKWLKNLVDSGEYIDTYRILHT 249 Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 Y+ W+ + +N G RID+I++ L I K G SDH PV Sbjct: 250 RPESYTCWNTMLNLRPRNLGTRIDYILIPSGFFYKLKDCDIQPKIYG----SDHCPVYAE 305 Query: 261 LD 262 +D Sbjct: 306 MD 307 >gi|218508818|ref|ZP_03506696.1| exodeoxyribonuclease III protein [Rhizobium etli Brasil 5] Length = 126 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 43/111 (38%), Positives = 64/111 (57%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+N ++ARI NL W+K+++PDI+CLQE KT D+ FP +++L YH+ET GQK Sbjct: 1 MKIATWNINGVKARIDNLTQWLKDSDPDIVCLQEIKTIDEGFPRLEIEALGYHVETHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 +NGVAILSK P E+ L + + + + Sbjct: 61 GFNGVAILSKSSPSEVNRGLARAMRWDKQARFPSRRGFTPARIPVSWRVCC 111 >gi|261886262|ref|ZP_06010301.1| exodeoxyribonuclease III [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 181 Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats. Identities = 43/165 (26%), Positives = 72/165 (43%), Gaps = 6/165 (3%) Query: 100 TINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159 + + N+Y P+G + K+ + +FL + + + + +IF GD N + Sbjct: 22 EHKFDNIHLFNIYFPNGQ-SGDERLAYKMDFYDKFLSYINALVSEGKGVIFCGDVNTAHR 80 Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKN 218 D NP + F R ++ + GF D R + D + YS+W Y ++ +KN Sbjct: 81 KIDLKNPKANSKTSGFLPIERAWIDRVIDSGFIDTFRFINGDKENAYSWWSYRFNARAKN 140 Query: 219 KGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 G RID+ +S L A I G SDH PV + +D+ Sbjct: 141 VGWRIDYFFISSNLKDKLKDAFILDSIEG----SDHCPVGIEIDL 181 >gi|19112314|ref|NP_595522.1| AP-endonuclease Apn2 [Schizosaccharomyces pombe 972h-] gi|48427993|sp|P87175|APN2_SCHPO RecName: Full=DNA-(apurinic or apyrimidinic site) lyase 2; AltName: Full=AP endonuclease 2; AltName: Full=Apurinic-apyrimidinic endonuclease 2 gi|2117306|emb|CAB09119.1| AP-endonuclease Apn2 [Schizosaccharomyces pombe] gi|40287246|gb|AAR83752.1| AP-endonuclease-like protein [Schizosaccharomyces pombe] Length = 523 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 44/307 (14%), Positives = 88/307 (28%), Gaps = 52/307 (16%) Query: 4 VTVATWNVNSIRARIHNL--------AAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55 + + +WNVN I+ + +E D+IC+QE K + +FP + + Sbjct: 1 MRILSWNVNGIQNPFNYFPWNKKNSYKEIFQELQADVICVQELKMQKDSFPQQYAVVEGF 60 Query: 56 HIETCGQKSYNGVAILSKYQPIEI-----------------------------------V 80 K G + + Y ++ Sbjct: 61 DSYFTFPKIRKGYSGVGFYVKKDVAIPVKAEEGITGILPVRGQKYSYSEAPEHEKIGFFP 120 Query: 81 THLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQ 140 + + + IG + ++ + + Sbjct: 121 KDIDRKTANWIDSEGRCILLDFQMFILIGVYCPVNSGENRLEYRRAFYKALRERIERLIK 180 Query: 141 RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIR---- 196 + L+ + P II E+ +E RQ + L + Sbjct: 181 EGNRKIILVGDVNILCNPIDTADQKDIIRESLIPSIMESRQWIRDLLLPSRLGLLLDIGR 240 Query: 197 -ATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHT 255 +++ W+ ++ N G RID+ + +P+ + A I + G SDH Sbjct: 241 IQHPTRKGMFTCWNTRLNTRPTNYGTRIDYTLATPDLLPWVQDADIMAEVMG----SDHC 296 Query: 256 PVIVSLD 262 PV + L Sbjct: 297 PVYLDLK 303 >gi|164654988|ref|XP_001728626.1| hypothetical protein MGL_4225 [Malassezia globosa CBS 7966] gi|159102507|gb|EDP41412.1| hypothetical protein MGL_4225 [Malassezia globosa CBS 7966] Length = 342 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 55/257 (21%), Positives = 97/257 (37%), Gaps = 13/257 (5%) Query: 5 TVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62 +A WN+ S+++ L ++ + D++ ETK + Y + + Sbjct: 69 RIAIWNITSLKSSDAKGLMRYVHAEDADVLVFSETKVNETPSHAGLDAMYKYRYWGIGEK 128 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y G+A+LSK +PI + LPG + T+ + + G+ + + Sbjct: 129 KGYAGIAVLSKQKPIHVEKGLPG--FHDPSSNARLLTVEFPHTVLVATYAVNAGDGLKTL 186 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA--CFTLEVR 180 + L Q L ++ +I+ GD N++ D N A E Sbjct: 187 G---NKNAWNEALEKHLQSLPSDKEVIWCGDLNVVWDDRDLAGASKKWNKAAGYTQAECD 243 Query: 181 QSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + L DA R H Y+++ + S+ G RID ++ A S + + Sbjct: 244 AHRRILATNDMCDAWRECHPDAVGHYTYYGWRGQCRSRGAGWRIDSFIIRKRALSRVKAC 303 Query: 240 RIDTKPRGWTKPSDHTP 256 I + G PSDH P Sbjct: 304 EIRHEIYG---PSDHVP 317 >gi|170102771|ref|XP_001882601.1| predicted protein [Laccaria bicolor S238N-H82] gi|164642498|gb|EDR06754.1| predicted protein [Laccaria bicolor S238N-H82] Length = 650 Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats. Identities = 54/331 (16%), Positives = 102/331 (30%), Gaps = 72/331 (21%) Query: 4 VTVATWNVNSIRARIHNLAAW--IKENN-------PDIICLQETKTEDKNFPFETLQSLN 54 + + TWN+N +R + W +K ++ DIIC QE K+ P + + Sbjct: 1 MRILTWNINGVRT-LPQYHPWNTLKAHDDILNHLEADIICFQEMKSSRPALPKQVAVPPS 59 Query: 55 YHIETCGQKS---YNGVAILSKYQPIEIVT------------------------------ 81 Y Y+GVA +++ + + Sbjct: 60 YDSFFSFPIRKSGYSGVATYTRHSAVIPLKAEEGLSGVLQPKPPLTAAERISDSDNYPPN 119 Query: 82 ----HLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF 137 + GD T ++ + N+Y P+ T + K+ + + Sbjct: 120 AETASIEGDLDYADLDSEGRTVILDLGLFVLINVYCPNDGNGTEERDKYKMDFHRLLEMR 179 Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCYNPI----------------IWENDACFTLEVR- 180 ++ ++ GD N D W D+ + Sbjct: 180 VVGLIKEGREVMVVGDLNACAAIIDHCEGHLMVAKGLAEGLQGEEGFWGKDSRRWMRGFL 239 Query: 181 --QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 + + + +Y+ W+ + N G RID+I+++ + + Sbjct: 240 VPEDEGMPGGFMIDIVRKLWPERKGMYTCWNTKISARDSNYGTRIDYILITRGLLPWVKA 299 Query: 239 ARIDTKPRGWTKPSDHTPVIVSL--DIPEPR 267 A I K SDH PV V L +I +P Sbjct: 300 ADIQP----LIKGSDHCPVYVDLFDEITDPT 326 >gi|288576120|ref|ZP_06394182.1| exodeoxyribonuclease III [Neisseria mucosa ATCC 25996] gi|288566274|gb|EFC87834.1| exodeoxyribonuclease III [Neisseria mucosa ATCC 25996] Length = 122 Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 41/122 (33%), Positives = 66/122 (54%) Query: 142 LELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT 201 + E L+ GD+NI P DCY+P W + RQ F+ L ++G TD++R H Sbjct: 1 MTRHEKLVLLGDFNIAPADADCYDPEKWHEKIHCSSIERQWFKNLLDLGLTDSLRQIHPE 60 Query: 202 HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 Y+++DY + + G+RIDH ++SP +++L +D R +PSDH PV+ Sbjct: 61 GAFYTWFDYRGAMFQRKLGLRIDHQLISPALSAVLKDVYVDLDARAQERPSDHAPVVAEF 120 Query: 262 DI 263 D+ Sbjct: 121 DL 122 >gi|255018766|ref|ZP_05290892.1| 3'-exo-deoxyribonuclease exoA [Listeria monocytogenes FSL F2-515] Length = 136 Score = 111 bits (276), Expect = 1e-22, Method: Composition-based stats. Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 5/138 (3%) Query: 127 KISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL 186 + + + L+ +P++ GD N+ + D NP +A F+ E R F Sbjct: 3 YRMTFEDAILEYVKNLDKTKPVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKFSAF 62 Query: 187 QNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKP 245 + GF D+ R + YS+W Y ++ ++N G RID+ ++S L A+I Sbjct: 63 LDAGFIDSFRYFYPDLTDAYSWWSYRMNARARNTGWRIDYFVVSERLKDKLVDAKIHADV 122 Query: 246 RGWTKPSDHTPVIVSLDI 263 G SDH PV + L++ Sbjct: 123 LG----SDHCPVELELNL 136 >gi|289612237|emb|CBI60149.1| unnamed protein product [Sordaria macrospora] Length = 223 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 59/234 (25%), Positives = 99/234 (42%), Gaps = 36/234 (15%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIET 59 M ++VA+WN+NS+R R+ + +++E PD++CLQETK E+++FP + L+ L Y HI Sbjct: 23 MDTLSVASWNINSVRFRMDIVEQFLREAQPDVLCLQETKVENRDFPHDPLRRLGYSHIAI 82 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 GQ+ ++GVA++SK + LRI N+Y+P G + Sbjct: 83 NGQRMHHGVAVISK-----VPLAEDDRLDWQANGEARHLGVRLANGLRIENVYIPAGGDV 137 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + + K FL I W + +EV Sbjct: 138 PDREVNPKFGQKLDFLE----------------------------RMIDWSKVSHTPIEV 169 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHL-YSFWDYYADSW-SKNKGIRIDHIMLSPE 231 + + D R Y++W Y A W + ++G R+DH+ S + Sbjct: 170 ETLARLQAANDWIDLGRQFVPAPQRLYTWWSYRAKDWAASDRGRRLDHMWASRD 223 >gi|116193731|ref|XP_001222678.1| hypothetical protein CHGG_06583 [Chaetomium globosum CBS 148.51] gi|88182496|gb|EAQ89964.1| hypothetical protein CHGG_06583 [Chaetomium globosum CBS 148.51] Length = 646 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 50/323 (15%), Positives = 93/323 (28%), Gaps = 70/323 (21%) Query: 4 VTVATWNVNSI------RARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55 + + TWN I RAR L A DI+ +QETK + K+ + + + Sbjct: 3 LRITTWN--GITAVTLPRARTKLTSLQAMFDTLEADIVVMQETKIQRKDLRDDMVLVPGW 60 Query: 56 HIET---CGQKSYNGVAILSKYQPIEIVTHLPGDD--LDVQARFIEATFTINTQTLRIGN 110 + +K Y+GVAI ++ + G L + Q + Sbjct: 61 DVFFSLPKYKKGYSGVAIYTRSSKCCPIRAEEGITGTLCPPNSSTKFQHLPVDQQIGGYP 120 Query: 111 LYLPHGNPITSTKYD------------------------------DKISWIKRFLRFASQ 140 + + D + ++I Sbjct: 121 TPGQLSDYVDEPTLDSEGRCVILEFPAFVLIGVYSPATRDETRDEFRQAYINAIDVRVRN 180 Query: 141 RLELEEPLIFAGDYNIIPQPHDCY---------------------NPIIWENDACFTLEV 179 + + + + GD NII D + + Sbjct: 181 LVAMGKQVFLCGDLNIIRSEQDTAGLAERLRKEEMTLDDFFSTPSRCFLNHIVFGGHVAG 240 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + + + + + +Y+ WD ++ N G RID+++ S + Sbjct: 241 EREEGREEPVLWDLCREFHPTRPGMYTCWDTRKNARPGNFGSRIDYVLCSSGIKDWFIDS 300 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 I G SDH PV ++D Sbjct: 301 NIQEGLLG----SDHCPVYATID 319 >gi|161869112|ref|YP_001598278.1| exodeoxyribonuclease [Neisseria meningitidis 053442] gi|161594665|gb|ABX72325.1| exodeoxyribonuclease [Neisseria meningitidis 053442] Length = 206 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 52/211 (24%), Positives = 97/211 (45%), Gaps = 10/211 (4%) Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 ++ H ++ Y+GVA+ SK +P + + ++ D + RF+ F L + +LY Sbjct: 1 MHGHWHCAEKRGYSGVAVYSKRKPDNVQIGMGIEEFDREGRFVRCDFD----RLSVISLY 56 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 LP G+ + K ++ F ++ GD+NI Q D N + + Sbjct: 57 LPSGSSAEERQQV-KYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLKNWKGNQKN 115 Query: 173 ACFTLEVRQSF-QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 + F E R+ + + +G+TD R + Y++W +++K+ G RID+ M++PE Sbjct: 116 SGFLPEEREWIGKVIHKLGWTDMWRTLYPDVPGYTWWSNRGQAYAKDVGWRIDYQMVTPE 175 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + SA + K SDH P+++ D Sbjct: 176 LAAKAVSAHVYKD----EKFSDHAPLVMEYD 202 >gi|126643348|ref|YP_001086332.1| catabolite repression control protein [Acinetobacter baumannii ATCC 17978] Length = 229 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 53/234 (22%), Positives = 87/234 (37%), Gaps = 8/234 (3%) Query: 35 LQETKTEDKNFPFETLQSLNYHIETCGQKS--YNGVAILSKYQPIEIVTHLPGDDLDVQA 92 +QE++ + + E + +H + Y G AI S+ + I L + D Q Sbjct: 1 MQESRITHEQWT-EKFRPEGWHTHLFPAERAGYAGTAIYSRLPFVSIKDGLGFELADSQG 59 Query: 93 RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG 152 RFI A F + K ++ + + Q + + +I G Sbjct: 60 RFISAEFDLGLSHPVHIASLYLPSGSSGEEAQARKDLFLGEYAKILKQWRDENKSIIICG 119 Query: 153 DYNIIPQPHDCYNPIIWENDACFTL-EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYY 211 DYNI+ + D N + + E +G+ D R LYS+W Sbjct: 120 DYNIVHKRIDIKNWSGNQKSSGCLPHERAWLDHIYDELGYVDTFRVVRTEAELYSWWSNR 179 Query: 212 ADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 + +KN G RID+ SP+ + +A + SDH PVI+ I E Sbjct: 180 GQARAKNVGWRIDYHACSPDWKARTVNAWVYKD----QWFSDHAPVIIDYKIQE 229 >gi|329896531|ref|ZP_08271589.1| Exodeoxyribonuclease III [gamma proteobacterium IMCC3088] gi|328921748|gb|EGG29121.1| Exodeoxyribonuclease III [gamma proteobacterium IMCC3088] Length = 255 Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats. Identities = 57/264 (21%), Positives = 102/264 (38%), Gaps = 15/264 (5%) Query: 4 VTVATWNVNS-IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + V +++ + I A W+++ + D IC+Q+ + + + ++ Y+ Sbjct: 1 MRVISFSADGLIEAEKQGFYEWVRDQDADFICIQDIRCSEYDLRKDSFFPREYNAYFYDN 60 Query: 63 KSYN---GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 + + GVAI K P I+T L D D+ +I+A F + IG+L P+ P Sbjct: 61 LNDSKKDGVAIYCKELPKAIMTGLGFTDFDMDGHYIQADFG----NVSIGSLIAPYAAPN 116 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K + + + + I G++ I + D F E Sbjct: 117 DAAAQARKNEFYQLLVAHLEKVSHKRREFIICGNWRIAHKAKDVEYTERRSKLPGFLAEE 176 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 RQS ++ +G+ DA R + YSFW G+R D ++S + Sbjct: 177 RQSLDEIMELGYVDAFREVNSDSDEYSFWP---GGQVGVDGMRTDFQLVSKGLKYNIDYG 233 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 I S H PVI+ D+ Sbjct: 234 VIYKA----KSFSTHAPVIMDYDL 253 >gi|307747194|gb|ADN90464.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni M1] Length = 198 Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats. Identities = 44/209 (21%), Positives = 73/209 (34%), Gaps = 13/209 (6%) Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + + + Y+GV L + D+ + Sbjct: 2 YFNSAKRAGYSGVMSLCNFDSEVKKCEFFDDEEGRVLEHRFKNIALFNIYF--------P 53 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + + K+ + FL + + L+ +I GD N + D +P N + F Sbjct: 54 NGQKDEERLNFKMKFYVDFLVYLDKLLKDGFEIIICGDVNTAHKEIDLTHPKANANTSGF 113 Query: 176 TLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 R L +GF D R + + YS+W Y + +N G RID+ +S Sbjct: 114 LPIERAWIDDLLKLGFIDTFREINGEIKEKYSWWSYRMKARERNVGWRIDYFFISKGLKD 173 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 L +A I G SDH PV + +DI Sbjct: 174 KLKNAFIRDDIFG----SDHAPVGIEIDI 198 >gi|307109978|gb|EFN58215.1| hypothetical protein CHLNCDRAFT_142087 [Chlorella variabilis] Length = 483 Score = 109 bits (271), Expect = 5e-22, Method: Composition-based stats. Identities = 41/254 (16%), Positives = 85/254 (33%), Gaps = 15/254 (5%) Query: 4 VTVATWNVNSI-----RARIHNL--AAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56 + + WN+NS+ A + + + +E+ DI CLQE+K + E Y Sbjct: 1 MKLLCWNINSLAPTVRNAVLKHGSWLGFFQEHGLDIACLQESKVPEDKLTKELCCVDGYQ 60 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF------TINTQTLRIGN 110 + G A P + + T + + + Sbjct: 61 SFWAHSRQGRGHAPDIPPGPAAAQRCREKKGYSGVTTYASDAYAPLVLITDHGAFVLVNV 120 Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170 G+ + K+ ++ R + L+ GD+N+ + D + ++ Sbjct: 121 YVPNAGDRPDRPRLHYKLRFLAALRRKCEELAVAGRELLLVGDFNVPAEARDVHPDLLPG 180 Query: 171 NDACF-TLEVRQSFQKLQNMGFTDAIRATHDTHHL-YSFWDYYADSWSKNKGIRIDHIML 228 + ++ + D R H YS W+ + + N+G+RID+++ Sbjct: 181 GSLDELYGQEERAALHALTAAYPDVWRRLHPQEAATYSVWNEKTSARAFNRGLRIDYVLC 240 Query: 229 SPEATSLLHSARID 242 +P + S I Sbjct: 241 TPGLLGRVVSCEIL 254 >gi|145344271|ref|XP_001416660.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144576886|gb|ABO94953.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 269 Score = 109 bits (271), Expect = 6e-22, Method: Composition-based stats. Identities = 64/277 (23%), Positives = 108/277 (38%), Gaps = 31/277 (11%) Query: 9 WNVNSIRA----RIHNLAAWIKENNPDIICLQETKTED---KNFPFETLQSLNYH----- 56 WNV +R+ + L I PD++ LQE K ++ F + + Sbjct: 2 WNVAGLRSFHEKSLDRLRGVIAGEAPDVVILQEHKLQETHCAAFTERLRRDFPMYKTVQF 61 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 + +K Y+GVA + +EI L + R T T+ + + Y+P+ Sbjct: 62 AVSVAKKGYSGVATYDGPKLLEIREGLGARGYTDEGR----TMTLEFEGFYLVTAYVPNS 117 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND---A 173 + D +I +R +R + L+ ++P+++ GD N+ D +N Sbjct: 118 GQ-DLKRLDYRIGEWERDMRAHLKELDAKKPVVYMGDLNVAHLDSDIWNVGASHIKKSAG 176 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 E L+ DA R H D +S+W A + NKG+R+D+ + S Sbjct: 177 TTPQEREAFGVMLEENDLRDAFRHFHGDAVGWFSYWSVRAGNRPFNKGLRLDYTLASKRV 236 Query: 233 TS------LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + A I K G SDH PV V+L + Sbjct: 237 FDGGADGVEVVDAFILDKVLG----SDHAPVGVTLAL 269 >gi|297156312|gb|ADI06024.1| exonuclease [Streptomyces bingchenggensis BCW-1] Length = 340 Score = 109 bits (271), Expect = 6e-22, Method: Composition-based stats. Identities = 41/130 (31%), Positives = 69/130 (53%), Gaps = 1/130 (0%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSI AR+ L AW++ + D++C+QE K+ + FP+E L+ L Y Sbjct: 1 MRIATWNVNSITARLPRLLAWLESSGTDVLCIQEIKSAESAFPYEPLRELGYEAAVNATG 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +NGV ++S+ ++ LPG + A +R+ ++Y+P+G I Sbjct: 61 RWNGVGVISRVGLADVTPGLPGGPDYEGEQEPRAIAATCG-GVRVQSVYVPNGREIGHPH 119 Query: 124 YDDKISWIKR 133 YD K+ W + Sbjct: 120 YDYKLRWFEA 129 >gi|256086538|ref|XP_002579455.1| ap endonuclease [Schistosoma mansoni] gi|238664890|emb|CAZ35694.1| ap endonuclease, putative [Schistosoma mansoni] Length = 426 Score = 108 bits (270), Expect = 7e-22, Method: Composition-based stats. Identities = 57/324 (17%), Positives = 97/324 (29%), Gaps = 64/324 (19%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS--LNYHIE 58 M+ V + +WN+N +R+ H L + + DIIC+QETKT Y Sbjct: 1 MNRVRICSWNINGLRSIQHPLKSILDSLTSDIICIQETKTTPDISREFAFADNYNGYFSH 60 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDD------------------------------- 87 + + Y+G A+ + T +D Sbjct: 61 SIHKTGYSGTAVFCRNPLKPTKTFHSLNDILVESISCQNNSIDGWGFLKRKLNISHTEAR 120 Query: 88 -----------LDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 F + L + ++Y P NP + + K + Sbjct: 121 NLDAEGRVLGLQFSTDIFTTFRTPDEIRPLIVLSIYFPRLNPENVERLNYKHLFQSAVQL 180 Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT---- 192 L +E ++ AGD+NI + D P D + Q L Sbjct: 181 CIE-SLLIENNVVIAGDFNICHKMIDHCAPDELMMDKFSNSFRQWFDQLLIEEQQDVSLD 239 Query: 193 -----------DAIRATHDTHH-LYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH--- 237 D R H ++ W ++ N G+R+D+I+ + ++ Sbjct: 240 NQSSVGLRRFVDIFRLLHPHRKNAFTCWSSRTNARQTNYGVRLDYILFDMKLVEIITTIS 299 Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261 I SDH P+ L Sbjct: 300 DNNIQADLMSHINGSDHCPIYADL 323 >gi|319945181|ref|ZP_08019443.1| exodeoxyribonuclease III [Lautropia mirabilis ATCC 51599] gi|319741751|gb|EFV94176.1| exodeoxyribonuclease III [Lautropia mirabilis ATCC 51599] Length = 162 Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats. Identities = 38/153 (24%), Positives = 63/153 (41%), Gaps = 5/153 (3%) Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 + + K +++ F R + + +I GD+N+ + D N + + Sbjct: 12 YVPSGSSSEERLQRKFVFMEAFARHMQELKDSGREIILCGDWNVAHKEIDLKNWRSNQKN 71 Query: 173 ACFTLEVRQSFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 + F E RQ L + GF D R Y++W +W+KN G RID+ + +P Sbjct: 72 SGFLPEERQWLSSLLDEIGFVDVFRQLDPRPEQYTWWSNRGQAWAKNVGWRIDYQIATPG 131 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 + A I R SDH P+I+ D P Sbjct: 132 IAATATRAEIYKDER----FSDHAPLIIDYDWP 160 >gi|293338471|gb|ADE43488.1| AmpN [Stenotrophomonas maltophilia] Length = 220 Score = 108 bits (269), Expect = 9e-22, Method: Composition-based stats. Identities = 53/229 (23%), Positives = 88/229 (38%), Gaps = 23/229 (10%) Query: 49 TLQSLNYHIETCG---QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT 105 + +H +K Y+GVAI SK +P +++T L D + R+IEA + Sbjct: 1 MFRPDGHHCFYRDAITKKGYSGVAIYSKREPDQVITSLGWAPFDDEGRYIEARYG----N 56 Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165 L + + Y+P G+ + K ++ + + GD+NI+ D N Sbjct: 57 LSVVSFYIPSGS-SGDLRQGFKFEVMEWLRPILEEWARSGRDYVLCGDWNIVRSALDIKN 115 Query: 166 PIIWENDACFTLEVRQSFQKLQNMG-----------FTDAIRATHDTHHLYSFWDYYADS 214 + ++ E R L + DA R + T Y++W + Sbjct: 116 WKSNQKNSGCLPEERDWLNALCADHGQATDVAAGRGWADAYRLLNPTGEDYTWWSNRGAA 175 Query: 215 WSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + N G RID+ ++P L S I R SDH P V D+ Sbjct: 176 RANNVGWRIDYQFITPGLRDRLRSCSIYRDER----FSDHAPFTVDYDL 220 >gi|326538609|gb|ADZ86824.1| exodeoxyribonuclease III (xth) [Brucella melitensis M5-90] Length = 74 Score = 108 bits (269), Expect = 9e-22, Method: Composition-based stats. Identities = 38/70 (54%), Positives = 56/70 (80%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+N ++ARI NL W++E++PDI+CLQE K+ D+ FP +++L YH+ET GQK Sbjct: 1 MKIATWNINGVKARIDNLQHWLRESSPDIVCLQEIKSVDEQFPRLEIEALGYHVETHGQK 60 Query: 64 SYNGVAILSK 73 +NGVA+LSK Sbjct: 61 GFNGVALLSK 70 >gi|262165968|ref|ZP_06033705.1| exodeoxyribonuclease III [Vibrio mimicus VM223] gi|262025684|gb|EEY44352.1| exodeoxyribonuclease III [Vibrio mimicus VM223] Length = 195 Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats. Identities = 45/182 (24%), Positives = 72/182 (39%), Gaps = 8/182 (4%) Query: 89 DVQARFIEATFTINTQTLRIGNLYLPHGNPITS-TKYDDKISWIKRFLRFASQRLELEEP 147 + + + I N Y P G+ + TK+ K + + + + + E Sbjct: 14 HQKRMIMATFADEDGNKTTILNGYFPQGDNVEHETKFPYKRQFYRDLMTYLREHRSNTES 73 Query: 148 LIFAGDYNIIPQP------HDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT 201 L+ GD NI P + F E R+ Q L + G D R H Sbjct: 74 LVVMGDINISPLDLDIGIGEANRKRWLQTGKCSFQPEEREWLQTLMDWGLVDTFRQLHPE 133 Query: 202 -HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 +S++DY + + N+G+RID I+ +P A ID + RG KPSDH P+ + Sbjct: 134 VSDQFSWFDYRSRGFDDNRGLRIDVILATPTLAETCQEAGIDYELRGIDKPSDHAPIWAT 193 Query: 261 LD 262 Sbjct: 194 FK 195 >gi|296880312|ref|ZP_06904277.1| exodeoxyribonuclease III [Clostridium difficile NAP07] gi|296428755|gb|EFH14637.1| exodeoxyribonuclease III [Clostridium difficile NAP07] Length = 181 Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats. Identities = 42/138 (30%), Positives = 64/138 (46%), Gaps = 5/138 (3%) Query: 126 DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQK 185 + + + +L+ +P+I GD N+ + D NP +A FT E R+ F K Sbjct: 48 EYRTRWEDDFIDYLTKLDNHKPVIVCGDMNVAHKEIDLKNPKNNMKNAGFTKEEREKFSK 107 Query: 186 LQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK 244 L + GF D R + +YS+W Y ++ N G RID+ S + L SA I T+ Sbjct: 108 LLDSGFIDTYRYFNPDKEGVYSWWSYRFNARKNNAGWRIDYFCASKKLEDRLISADIHTE 167 Query: 245 PRGWTKPSDHTPVIVSLD 262 G SDH PV + + Sbjct: 168 VLG----SDHCPVELEIK 181 >gi|4678346|emb|CAB41156.1| putative protein [Arabidopsis thaliana] Length = 686 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 59/324 (18%), Positives = 105/324 (32%), Gaps = 56/324 (17%) Query: 5 TVATWNVNSIRARIH----NLAAWIKENNPDIICLQETKT-------------------- 40 TWN NS R+ + ++ + +PD+I +QE + Sbjct: 366 KFMTWNANSFLLRVKNDWSQFSKFVSDFDPDVIAIQEVRMPAAGGKGKPKNHEELSDDTK 425 Query: 41 ---EDKNFPFETL--QSLNYH--IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR 93 E+K L + + Y G A+L K + D L + Sbjct: 426 VLREEKQILTRALSSPPFGNYGVWWSLADSKYAGTALLVKKCFKPRKVYFNLDKLASKHE 485 Query: 94 FIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGD 153 +T R+ N Y P+ + ++PLI+ GD Sbjct: 486 PDGRVILAEFETFRLLNTYSPNNGWKDEEN-AFQRRRKWDKRIVEFLNKTSDKPLIWCGD 544 Query: 154 YNIIPQPHDCYNPIIW---------------ENDACFTL-EVRQSFQKLQNMGFTDAIRA 197 N+ + D +P + FT E + ++ DA R Sbjct: 545 LNVSHEEIDVSHPEFFATAKLNGYVPPNKEDCGQPGFTPSERGRFGATIKEGRLVDAYRY 604 Query: 198 THDTHHLYSFWDYYADSWSKNKG--IRIDHIMLSPEATSLLHSARIDTKPRGWT----KP 251 H + S + + + K +G +RID+ ++S + + S ++ RG Sbjct: 605 LHKEQEMESGFSWSGNPIGKYRGKRMRIDYFLVSEQLKDRIVSCKMH--GRGIELEGFHG 662 Query: 252 SDHTPVIVSLDIPEPRKKQQDSTS 275 SDH PV + L P +Q ++ Sbjct: 663 SDHCPVTLELSKPSSEMEQNQVSN 686 >gi|308801717|ref|XP_003078172.1| ARP protein (ISS) [Ostreococcus tauri] Length = 460 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 66/307 (21%), Positives = 116/307 (37%), Gaps = 49/307 (15%) Query: 3 VVTVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTEDKNFPF--ETLQSL--N 54 +WNV +R+ + L A ++E PD+I LQE K + + L+ L Sbjct: 159 TFKAISWNVAGLRSFVEKSGAKLRALVEEERPDVIILQEHKLQMSHIDAFGSKLKELCPG 218 Query: 55 Y----HIETCGQKSYNGVAILSKYQP----------------------IEIVTHLPGDDL 88 Y + +K Y+G+ +S+ + V+H G Sbjct: 219 YDTTRFAVSTAKKGYSGIVAVSREGRKGGQVTIEAMLGGASKPAVSDGFKAVSHSEGLQG 278 Query: 89 DVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPL 148 T TI + + + Y+P+ + D +I +R ++ + L+ ++P+ Sbjct: 279 GTAYVDEGRTLTIEYEKFYVVSAYVPNSGQ-DLKRLDYRIKEWERDMKAHLKALDAKKPV 337 Query: 149 IFAGDYNIIPQPHDCYNPIIWEND---ACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHL 204 I+ GD N+ D +N E L+ G D+ R H D Sbjct: 338 IYIGDLNVAHLDADIWNVTASHIKKSAGTTPQERGAFGVMLEENGLHDSFRFFHGDAAGW 397 Query: 205 YSFWDYYADSWSKNKGIRIDHIMLSPEATS------LLHSARIDTKPRGWTKPSDHTPVI 258 +S+W A + NKG+R+D+ + S + A I + G SDH PV Sbjct: 398 FSYWSVRAGNRPFNKGLRLDYAVASKRLFDGDDSGVEVVDAFILDQVTG----SDHAPVG 453 Query: 259 VSLDIPE 265 ++L I + Sbjct: 454 ITLAIKD 460 >gi|116056623|emb|CAL52912.1| ARP protein (ISS) [Ostreococcus tauri] Length = 466 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 66/307 (21%), Positives = 116/307 (37%), Gaps = 49/307 (15%) Query: 3 VVTVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTEDKNFPF--ETLQSL--N 54 +WNV +R+ + L A ++E PD+I LQE K + + L+ L Sbjct: 165 TFKAISWNVAGLRSFVEKSGAKLRALVEEERPDVIILQEHKLQMSHIDAFGSKLKELCPG 224 Query: 55 Y----HIETCGQKSYNGVAILSKYQP----------------------IEIVTHLPGDDL 88 Y + +K Y+G+ +S+ + V+H G Sbjct: 225 YDTTRFAVSTAKKGYSGIVAVSREGRKGGQVTIEAMLGGASKPAVSDGFKAVSHSEGLQG 284 Query: 89 DVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPL 148 T TI + + + Y+P+ + D +I +R ++ + L+ ++P+ Sbjct: 285 GTAYVDEGRTLTIEYEKFYVVSAYVPNSGQ-DLKRLDYRIKEWERDMKAHLKALDAKKPV 343 Query: 149 IFAGDYNIIPQPHDCYNPIIWEND---ACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHL 204 I+ GD N+ D +N E L+ G D+ R H D Sbjct: 344 IYIGDLNVAHLDADIWNVTASHIKKSAGTTPQERGAFGVMLEENGLHDSFRFFHGDAAGW 403 Query: 205 YSFWDYYADSWSKNKGIRIDHIMLSPEATS------LLHSARIDTKPRGWTKPSDHTPVI 258 +S+W A + NKG+R+D+ + S + A I + G SDH PV Sbjct: 404 FSYWSVRAGNRPFNKGLRLDYAVASKRLFDGDDSGVEVVDAFILDQVTG----SDHAPVG 459 Query: 259 VSLDIPE 265 ++L I + Sbjct: 460 ITLAIKD 466 >gi|218291327|ref|ZP_03495287.1| exodeoxyribonuclease III Xth [Alicyclobacillus acidocaldarius LAA1] gi|218238773|gb|EED05987.1| exodeoxyribonuclease III Xth [Alicyclobacillus acidocaldarius LAA1] Length = 174 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 39/134 (29%), Positives = 61/134 (45%), Gaps = 5/134 (3%) Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG 190 + R L+ E+P+I GD N+ + D N ++ FT E R +L + G Sbjct: 45 WEDAFRAYLCALDREKPVIACGDLNVAHEEIDIKNAKSNRGNSGFTDEERAKMTELLDAG 104 Query: 191 FTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT 249 F D RA + Y++W +N G RID+ ++S + ARID G Sbjct: 105 FVDTFRALYPNVTDKYTWWSNMPGVRERNIGWRIDYFLVSERLRDRILEARIDDHVLG-- 162 Query: 250 KPSDHTPVIVSLDI 263 SDH PV++ +D+ Sbjct: 163 --SDHCPVVLEVDL 174 >gi|88607806|ref|YP_505072.1| exodeoxyribonuclease III, N-terminal truncation [Anaplasma phagocytophilum HZ] gi|88598869|gb|ABD44339.1| exodeoxyribonuclease III, N-terminal truncated [Anaplasma phagocytophilum HZ] Length = 185 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 46/173 (26%), Positives = 85/173 (49%), Gaps = 1/173 (0%) Query: 92 ARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFA 151 + +R+ ++Y+P+G + S + K+ +++ ++ E+ LI Sbjct: 13 RYIECTLECTGNKKIRVVSVYVPNGQEVESETFFYKLKFLEHLKDRLLNIMKTEDFLIAG 72 Query: 152 GDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDY 210 GD+N+ P+ D ++P + CF + R F+++ N G D R +S+W+Y Sbjct: 73 GDFNVAPEEIDVHDPKALDGRLCFHILERAKFREILNNGIVDIFRTFVGIDRKEFSWWNY 132 Query: 211 YADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 W N+G+RID ++ SP+ + I +K RGW PSDH PV+ +D+ Sbjct: 133 REGGWQNNRGLRIDALLSSPQIADKVLDCSILSKVRGWDTPSDHAPVMGDIDV 185 >gi|254716966|ref|ZP_05178777.1| exodeoxyribonuclease III (xth) [Brucella ceti M13/05/1] Length = 71 Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats. Identities = 38/70 (54%), Positives = 56/70 (80%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWN+N ++ARI NL W++E++PDI+CLQE K+ D+ FP +++L YH+ET GQK Sbjct: 1 MKIATWNINGVKARIDNLQHWLRESSPDIVCLQEIKSVDEQFPRLEIEALGYHVETHGQK 60 Query: 64 SYNGVAILSK 73 +NGVA+LSK Sbjct: 61 GFNGVALLSK 70 >gi|297816036|ref|XP_002875901.1| hypothetical protein ARALYDRAFT_347932 [Arabidopsis lyrata subsp. lyrata] gi|297321739|gb|EFH52160.1| hypothetical protein ARALYDRAFT_347932 [Arabidopsis lyrata subsp. lyrata] Length = 684 Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats. Identities = 63/324 (19%), Positives = 108/324 (33%), Gaps = 56/324 (17%) Query: 5 TVATWNVNSIRARIH----NLAAWIKENNPDIICLQETKTE----------------DKN 44 TWN NS R+ + ++ + +PD+I +QE + D Sbjct: 364 KFVTWNANSFLLRVKNDWSQFSKFVSDFDPDVIAVQEVRMPAAGGKGKPKNPEELSDDTK 423 Query: 45 FPFETLQSL----------NYHIETCGQKSYN-GVAILSKYQPIEIVTHLPGDDLDVQAR 93 E Q L NY + S G A+L K + D L + Sbjct: 424 VLREEKQILTRALSSPPFGNYRVWWSLADSKYAGTALLVKKCFKPKKVYFNLDKLASKHE 483 Query: 94 FIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGD 153 +T R+ N Y P+ + ++PLI+ GD Sbjct: 484 PDGRVILAEFETFRLLNTYSPNNGWKEEEN-SFQRRRKWDKRIVEFLNKTSDKPLIWCGD 542 Query: 154 YNIIPQPHDCYNPIIW---------------ENDACFTL-EVRQSFQKLQNMGFTDAIRA 197 N+ + D +P + FT E R+ + ++ DA R Sbjct: 543 LNVSHEEIDVSHPEFFATAKLNGYVPPNKEDCGQPGFTPSERRRFGETMKEGMLVDAYRY 602 Query: 198 THDTHHLYSFWDYYADSWSKNKG--IRIDHIMLSPEATSLLHSARIDTKPRGWT----KP 251 H + S + + + K +G +RID+ ++S + + S ++ RG Sbjct: 603 LHKEQDMESGFSWSGNPIGKYRGKRMRIDYFLVSEQLKDRIVSCKMH--GRGIELEGFYG 660 Query: 252 SDHTPVIVSLDIPEPRKKQQDSTS 275 SDH PV + L P +Q ++ Sbjct: 661 SDHCPVTLELSKPSSETEQNQVSN 684 >gi|226326255|ref|ZP_03801773.1| hypothetical protein PROPEN_00097 [Proteus penneri ATCC 35198] gi|225205333|gb|EEG87687.1| hypothetical protein PROPEN_00097 [Proteus penneri ATCC 35198] Length = 151 Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats. Identities = 40/148 (27%), Positives = 57/148 (38%), Gaps = 7/148 (4%) Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE------NDACFT 176 + K + + + L+ P++ GD NI P D F Sbjct: 4 NFQQKKKFYADLQNYLTASLKPTSPVLIMGDLNISPTDKDIGIGENNMKRWLKTGKCSFL 63 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R+ L G TD R H +S++DY + + N+G+RID ++ S Sbjct: 64 PEEREWLATLMGWGLTDTFRQQHPEADDKFSWFDYRSKGFDDNRGLRIDLLLASRCLADN 123 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 S ID RG KPSDH PV I Sbjct: 124 CISTGIDYDIRGMEKPSDHAPVWAEFKI 151 >gi|325067220|ref|ZP_08125893.1| exodeoxyribonuclease III [Actinomyces oris K20] Length = 163 Score = 106 bits (263), Expect = 5e-21, Method: Composition-based stats. Identities = 47/160 (29%), Positives = 77/160 (48%), Gaps = 5/160 (3%) Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIF--AGDYNIIPQPHD 162 +R+ +LY+P+G +T Y K+ W++ + LE E L GD+N+ P+ D Sbjct: 7 PVRLWSLYVPNGRELTHPHYTYKLDWLRVLRDDVAAWLEAEPDLPLALVGDWNVAPRDED 66 Query: 163 CYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR 222 ++ ++E + RQ+F G + R + Y++WDY + +N+G+R Sbjct: 67 VWDMSVFEGATHVSAPERQAFAAFAEAGMREVTR---ERVTNYTYWDYQKLRFPRNEGMR 123 Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 ID + SP + A ID R SDH PV+V LD Sbjct: 124 IDFVYASPALAGRVTGAAIDRDERKGKGASDHVPVMVELD 163 >gi|315282772|ref|ZP_07871102.1| exodeoxyribonuclease III [Listeria marthii FSL S4-120] gi|313613576|gb|EFR87390.1| exodeoxyribonuclease III [Listeria marthii FSL S4-120] Length = 108 Score = 105 bits (261), Expect = 8e-21, Method: Composition-based stats. Identities = 34/112 (30%), Positives = 52/112 (46%), Gaps = 5/112 (4%) Query: 153 DYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYY 211 D N+ D NP +A F+ E R F + GF D+ R + YS+W Y Sbjct: 1 DLNVAHAEIDLKNPKTNRKNAGFSDEERAKFSAFLDAGFIDSFRYFYPDLTDAYSWWSYR 60 Query: 212 ADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 ++ ++N G RID+ ++S L A+I G SDH PV + L++ Sbjct: 61 MNARARNTGWRIDYFVVSERLKDKLVDAKIHADVLG----SDHCPVELELNL 108 >gi|255026927|ref|ZP_05298913.1| hypothetical protein LmonocytFSL_12426 [Listeria monocytogenes FSL J2-003] Length = 178 Score = 105 bits (261), Expect = 8e-21, Method: Composition-based stats. Identities = 43/181 (23%), Positives = 78/181 (43%), Gaps = 8/181 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + +E + DI CLQETK ++ + +Y + Sbjct: 1 MKLISWNVNGLRAAVKKGFLEYFEEADADIFCLQETKLQEGQIELDLPAYKDY-WNYAVK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +P+ + L + D + R I F + Sbjct: 60 KGYSGTAIFTKVEPLSVQYGLGIPEHDTEGRVITLEFEEF-----FMVTVYTPNSQAELK 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + D ++++ L + L+ +P++ GD N+ + D NP +A F+ E R Sbjct: 115 RLDYRMTFEDAILEYVK-NLDNTKPVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAK 173 Query: 183 F 183 F Sbjct: 174 F 174 >gi|163790917|ref|ZP_02185341.1| exodeoxyribonuclease [Carnobacterium sp. AT7] gi|159873870|gb|EDP67950.1| exodeoxyribonuclease [Carnobacterium sp. AT7] Length = 201 Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats. Identities = 50/201 (24%), Positives = 84/201 (41%), Gaps = 8/201 (3%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA I E + D CLQETK ++ F+ +Y + Sbjct: 1 MKFISWNVNGLRAIIKKGFMDIFNELDADFFCLQETKLQEGQIEFKVPGYYDY-WNYAEK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K++P+ + + + D + R I ++ + Sbjct: 60 KGYSGTAIFTKHKPLSVTYGIGKPEHDQEGRVITLSYPD-----YYVVTCYTPNSKSELK 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + D ++ W FL + L+ E+P+I GD N+ + D N + A F+ E R Sbjct: 115 RLDYRMEWEDDFLSYLK-TLDTEKPVILCGDLNVAHENIDLKNWKTNQKSAGFSEEERLK 173 Query: 183 FQKLQNMGFTDAIRATHDTHH 203 F L + GF D R + Sbjct: 174 FSTLLDNGFIDTFRYFYPNKE 194 >gi|42565714|ref|NP_566904.2| endonuclease/exonuclease/phosphatase family protein [Arabidopsis thaliana] gi|53828525|gb|AAU94372.1| At3g48425 [Arabidopsis thaliana] gi|55733769|gb|AAV59281.1| At3g48425 [Arabidopsis thaliana] Length = 364 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 59/324 (18%), Positives = 105/324 (32%), Gaps = 56/324 (17%) Query: 5 TVATWNVNSIRARIH----NLAAWIKENNPDIICLQETKT-------------------- 40 TWN NS R+ + ++ + +PD+I +QE + Sbjct: 44 KFMTWNANSFLLRVKNDWSQFSKFVSDFDPDVIAIQEVRMPAAGGKGKPKNHEELSDDTK 103 Query: 41 ---EDKNFPFETL--QSLNYH--IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR 93 E+K L + + Y G A+L K + D L + Sbjct: 104 VLREEKQILTRALSSPPFGNYGVWWSLADSKYAGTALLVKKCFKPRKVYFNLDKLASKHE 163 Query: 94 FIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGD 153 +T R+ N Y P+ + ++PLI+ GD Sbjct: 164 PDGRVILAEFETFRLLNTYSPNNGWKDEEN-AFQRRRKWDKRIVEFLNKTSDKPLIWCGD 222 Query: 154 YNIIPQPHDCYNPIIW---------------ENDACFTL-EVRQSFQKLQNMGFTDAIRA 197 N+ + D +P + FT E + ++ DA R Sbjct: 223 LNVSHEEIDVSHPEFFATAKLNGYVPPNKEDCGQPGFTPSERGRFGATIKEGRLVDAYRY 282 Query: 198 THDTHHLYSFWDYYADSWSKNKG--IRIDHIMLSPEATSLLHSARIDTKPRGWT----KP 251 H + S + + + K +G +RID+ ++S + + S ++ RG Sbjct: 283 LHKEQEMESGFSWSGNPIGKYRGKRMRIDYFLVSEQLKDRIVSCKMH--GRGIELEGFHG 340 Query: 252 SDHTPVIVSLDIPEPRKKQQDSTS 275 SDH PV + L P +Q ++ Sbjct: 341 SDHCPVTLELSKPSSEMEQNQVSN 364 >gi|119503531|ref|ZP_01625614.1| Exonuclease III [marine gamma proteobacterium HTCC2080] gi|119460593|gb|EAW41685.1| Exonuclease III [marine gamma proteobacterium HTCC2080] Length = 282 Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats. Identities = 55/265 (20%), Positives = 104/265 (39%), Gaps = 17/265 (6%) Query: 4 VTVATWNVNSI-RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET--- 59 + V + V + +A+ L W+ E + D++CLQ+T+ + + NY Sbjct: 30 MKVVSLVVEGLEQAQKAGLFDWLHEEDADVVCLQDTRCSEYTLKGDVYFPENYSPYFLDD 89 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 NGVAI K P I+T L D D + +I+A + + + Sbjct: 90 FENPKRNGVAIYCKKLPKAIMTGLGFADFDSRGLYIQADYPNISVGSLLIP-----SGQA 144 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K+ ++++ + + I G + +I Q D + F+ Sbjct: 145 GDEAMNTKLKFLEQLGQHLQKVKNKRRDFIICGGWELIGQSIDAEEAGNRTDIPGFSSIE 204 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + Q+L G+ DA R+ + + +++W D+ + +R D + S + SA Sbjct: 205 QAWLQELYQNGYCDAFRSINVSSEEFTWWPEGDDAGA----LRSDTHITSLSLEGRVDSA 260 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIP 264 I+T S H PVI+ D+ Sbjct: 261 VINTD----DAFSSHAPVIIEYDVD 281 >gi|327261945|ref|XP_003215787.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase 2-like [Anolis carolinensis] Length = 530 Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats. Identities = 68/322 (21%), Positives = 101/322 (31%), Gaps = 50/322 (15%) Query: 4 VTVATWNVNSIRARIHNLAA--WIKENNPDIICLQETKTEDKNF--PFETLQSLN-YHIE 58 + + +WNVN +RA + D+ICLQETK P ++ N Y Sbjct: 1 MRLLSWNVNGLRAGAGAAGLKPLLDALGADVICLQETKITRDLLEEPLAVVEGYNAYFSF 60 Query: 59 TCGQKSYNGVAI------------------LSKYQPIEIVTHLPGDDLDVQ--------- 91 + + Y+GVA +K++ PGD + Sbjct: 61 SRTRSGYSGVATFCKATATPEAAEEGLSGLWTKHEGAIGCYGAPGDFTTEELQALDSEGR 120 Query: 92 ---ARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPL 148 R T TL + N+Y P +P + + K+ + A L + Sbjct: 121 AVITRHRICTSEQQETTLTVVNVYCPRADPEKPERGEFKLRFYHLLQARAEALLRAGGHV 180 Query: 149 IFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN--------MGFTDAIRATHD 200 + GD N +P D +P L F D R H Sbjct: 181 VIMGDINTAHKPIDHCDPGDL-ESFQEHPGRNWLDGFLWEPGKESPHGELFVDTFRFLHP 239 Query: 201 THHL-YSFWDYYADSWSKNKGIRIDHIMLSPEAT-SLLHSARIDTKPRGWTKPSDHTPVI 258 T Y+ W S N G RID+I+ S L A++ + G SDH PV Sbjct: 240 TQKEAYTCWCNVTGSRHLNYGTRIDYILADRALALSELKEAQLRPEVFG----SDHCPVQ 295 Query: 259 VSLDIPEPRKKQQDSTSQNMKP 280 L + P Sbjct: 296 AVLKSVCLGAPRCPPLCTRFLP 317 >gi|213423897|ref|ZP_03356877.1| exonuclease III [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 90 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 33/82 (40%), Positives = 51/82 (62%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + ++N+N +RAR H L A ++++ PD+I LQETK D+ FP E + L Y++ GQK Sbjct: 1 MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDEMFPLEEVAKLGYNVFYHGQK 60 Query: 64 SYNGVAILSKYQPIEIVTHLPG 85 + GVA+L+K PI + P Sbjct: 61 GHYGVALLTKATPISVRRGFPD 82 >gi|164429579|ref|XP_964325.2| hypothetical protein NCU01961 [Neurospora crassa OR74A] gi|157073536|gb|EAA35089.2| hypothetical protein NCU01961 [Neurospora crassa OR74A] Length = 630 Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats. Identities = 47/281 (16%), Positives = 88/281 (31%), Gaps = 37/281 (13%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC---GQKSYNGVAILSKYQPI 77 + A + DI+ +QETK + K+ + + + + +K Y+GVAI ++ Sbjct: 27 VKAMFDTLDADIVVIQETKIQRKDLRDDMVLVPGWDVYFNLPTYKKGYSGVAIYTRSSKC 86 Query: 78 EIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP--------HGNPITSTKYDDKIS 129 + G + F +IG P + + + + + Sbjct: 87 CPIRAEEGITGVLCPPNSSTKFRDLPADQQIGGYPTPGQLSSDIDEAQLDSEGRIEFRQA 146 Query: 130 WIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNM 189 +I + L + + GD NII D TL+ S + + Sbjct: 147 FIDAMDARVRNLVSLGKEVFLCGDLNIIRNEMDTAGLPEQLKKEAMTLDQFISTPSRRFL 206 Query: 190 G---------------------FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 + +Y+ W+ ++ N G RID+++ Sbjct: 207 NQIVFGGRVIGEPDEGREKPVLWDLCREFHPKRPGMYTCWETRKNARPGNFGSRIDYVLC 266 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKK 269 S A I G SDH PV ++ R+ Sbjct: 267 SSGIKDWFVDANIQEGLLG----SDHCPVYATIS-DSVRRD 302 >gi|121727142|ref|ZP_01680316.1| exodeoxyribonuclease III [Vibrio cholerae V52] gi|153818870|ref|ZP_01971537.1| exodeoxyribonuclease III [Vibrio cholerae NCTC 8457] gi|121630520|gb|EAX62912.1| exodeoxyribonuclease III [Vibrio cholerae V52] gi|126510598|gb|EAZ73192.1| exodeoxyribonuclease III [Vibrio cholerae NCTC 8457] Length = 171 Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats. Identities = 40/162 (24%), Positives = 64/162 (39%), Gaps = 7/162 (4%) Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------H 161 + + N TK+ K + + + + + E L+ GD NI P Sbjct: 10 LNGYFPQGDNVEHETKFPYKRQFYRDLMTYLREHRSNSERLVVMGDINISPLDLDIGIGE 69 Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKG 220 + F E R+ Q L + G D R H +S++DY + + N+G Sbjct: 70 ANRKRWLQTGKCSFQPEEREWLQTLLDWGLVDTFRQLHPDVSDQFSWFDYRSRGFEDNRG 129 Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 +RID I+ +P A ID + R KPSDH P+ + Sbjct: 130 LRIDVILATPTLAETCQEAGIDYELRAIDKPSDHAPIWTTFK 171 >gi|291533503|emb|CBL06616.1| exodeoxyribonuclease III (xth) [Megamonas hypermegale ART12/1] Length = 151 Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats. Identities = 40/138 (28%), Positives = 60/138 (43%), Gaps = 5/138 (3%) Query: 127 KISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL 186 + R L ++P++ GD N+ + D NP A FT E R +L Sbjct: 18 YRMQWEDAFRNYLVELNKQKPVVMCGDLNVAHKEIDLKNPKTNRRSAGFTDEERSKMTEL 77 Query: 187 QNMGFTDAIRATHDTHH-LYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKP 245 GF D R + +YS+W Y + N G RID+ ++S + + + A I + Sbjct: 78 LQAGFVDTFRYLYPDKTSIYSWWSYMRKARENNAGWRIDYFIVSKDIETNIKEAGIHNEF 137 Query: 246 RGWTKPSDHTPVIVSLDI 263 G SDH PV + LDI Sbjct: 138 FG----SDHCPVSLELDI 151 >gi|313608204|gb|EFR84229.1| exodeoxyribonuclease III [Listeria monocytogenes FSL F2-208] Length = 102 Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats. Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 5/105 (4%) Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKN 218 D NP +A F+ E R F + GF D+ R + YS+W Y ++ ++N Sbjct: 2 EIDLKNPKTNRKNAGFSDEERAKFSAFLDAGFIDSFRYFYPDLTDAYSWWSYRMNARARN 61 Query: 219 KGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 G RID+ ++S L A+I G SDH PV + L++ Sbjct: 62 TGWRIDYFVVSERLKDKLVDAKIHADVLG----SDHCPVELELNL 102 >gi|294949245|ref|XP_002786115.1| Apurinic endonuclease-redox protein, putative [Perkinsus marinus ATCC 50983] gi|239900243|gb|EER17911.1| Apurinic endonuclease-redox protein, putative [Perkinsus marinus ATCC 50983] Length = 372 Score = 101 bits (252), Expect = 9e-20, Method: Composition-based stats. Identities = 48/273 (17%), Positives = 93/273 (34%), Gaps = 25/273 (9%) Query: 9 WNVNSIRA----RIHNLAAWIKENNPDIICLQETKTEDKN-------FPFETLQSL--NY 55 WNV S+R+ ++ L K+ PD++ E K +++ E ++ + Sbjct: 94 WNVGSLRSLLNHKVKELTDLCKKEQPDVLGFMEIKLSNEDMCEECDNLLREAVEDILGPV 153 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 I + G + + +D T + + + Y+P+ Sbjct: 154 EIVWNHCTAKKGYSGTAFVVRKSAGKFDSKLGIDGHEDPEGRTIALEFDDMVVVLCYVPN 213 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN---D 172 + + A ++P + GD N+ + D +N Sbjct: 214 SGQDLNRLAHRTSGKECFDAKLAKYCGSFDKPTLLLGDMNVADRDVDIWNVDKPHIPKSA 273 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 E + + GFTD H +S+W A + KN+G+R+D+++ +P Sbjct: 274 GTTNEERESFREHYTSKGFTDTFVNMHPEATGCFSYWSVRARNKPKNRGLRLDYVITAPG 333 Query: 232 A-TSLLHSARIDTK--PRGWTKPSDHTPVIVSL 261 + A I P G DH PV ++ Sbjct: 334 FPMDKIKDAFILEDFAPHG-----DHCPVGITF 361 >gi|307185028|gb|EFN71257.1| Recombination repair protein 1 [Camponotus floridanus] Length = 232 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 49/262 (18%), Positives = 87/262 (33%), Gaps = 59/262 (22%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFET-LQSLNYHIETCG 61 + + TWNV+ IRA I N +I + + DI+ LQETK + P E L +++ Sbjct: 28 LKICTWNVSGIRAVIKKNGMDYIIKEDADIVALQETKCDKDKLPNEVKLPGYHHYFVDSK 87 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 + Y GVA+ SK +PI + L D D + R I A F Sbjct: 88 KPGYCGVALFSKEKPISVKYGLNNSDFDSEGRMITAEF---------------------P 126 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + + + EE Sbjct: 127 EFFIVNVYLKNPKTNTKNAGFTKEERGDMTDFLATGFID--------------------- 165 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F + +S++ A++ +K+ G R+D+ ++S + + I Sbjct: 166 --------TFRLLYPDKEGAYTFWSYF---ANARNKDIGWRLDYFLVSERMKNKVCDNVI 214 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 + G PV + +++ Sbjct: 215 RKQVYGRDNW----PVKLFINL 232 >gi|237757109|ref|ZP_04585546.1| exodeoxyribonuclease III [Sulfurihydrogenibium yellowstonense SS-5] gi|237690734|gb|EEP59905.1| exodeoxyribonuclease III [Sulfurihydrogenibium yellowstonense SS-5] Length = 196 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 68/198 (34%), Positives = 103/198 (52%), Gaps = 6/198 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWI--KENNPDIICLQETKTEDKNFPFETLQSLNY-HIETC 60 + + T+NVNSI+AR + W+ + N+ D++C QE K EDKNFPFE + L Y + + Sbjct: 1 MKICTFNVNSIKARKDLVIEWLNHRNNDIDVLCFQEIKVEDKNFPFEDFKKLGYVYQDIS 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 GQK YNGVA LSK + L + DVQ R + I + + + N Y PHG+ Sbjct: 61 GQKGYNGVATLSKLEISHYQKGLNHEYFDVQKRVLID--KITEKEIFVINTYAPHGDLRG 118 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIF-AGDYNIIPQPHDCYNPIIWENDACFTLEV 179 KY K+ W K F+ F + + + + GD NI + D Y+P++ + E Sbjct: 119 GEKYYYKLDWYKHFINFLKENFDFDNQKVILLGDLNIALEDIDVYDPVLLTDSIGTMPEE 178 Query: 180 RQSFQKLQNMGFTDAIRA 197 R+ ++L N+G D R Sbjct: 179 RELLRQLLNLGLIDTFRN 196 >gi|328464771|gb|EGF36088.1| exodeoxyribonuclease III [Lactobacillus rhamnosus MTCC 5462] Length = 152 Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats. Identities = 41/133 (30%), Positives = 60/133 (45%), Gaps = 4/133 (3%) Query: 127 KISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL 186 R + L ++PL++ GD N+ +P D N ++A FT E R F K Sbjct: 18 YRQQWDRDFLAYTNELAAKKPLVYCGDLNVAHEPIDLKNDKTNHHNAGFTDEERADFTKQ 77 Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR 246 N GF D R + YS+W Y + + N G RID+ + S + A+I T+ Sbjct: 78 LNSGFIDTFRHFYPDTVTYSWWSYRFHARANNAGWRIDYFVASSAFQPYIQDAKILTQIM 137 Query: 247 GWTKPSDHTPVIV 259 G SDH PV + Sbjct: 138 G----SDHCPVEL 146 >gi|115488172|ref|NP_001066573.1| Os12g0279600 [Oryza sativa Japonica Group] gi|77554323|gb|ABA97119.1| exodeoxyribonuclease III family protein, expressed [Oryza sativa Japonica Group] gi|113649080|dbj|BAF29592.1| Os12g0279600 [Oryza sativa Japonica Group] gi|215687325|dbj|BAG91875.1| unnamed protein product [Oryza sativa Japonica Group] gi|222616909|gb|EEE53041.1| hypothetical protein OsJ_35763 [Oryza sativa Japonica Group] Length = 379 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 53/324 (16%), Positives = 94/324 (29%), Gaps = 61/324 (18%) Query: 5 TVATWNVNSIRARIH----NLAAWIKENNPDIICLQETKTE----------DKNFPFE-- 48 TWN NS+ R+ ++ +PD+IC+QE + + Sbjct: 61 RFVTWNANSLLLRMKSDWPAFCQFVSRVDPDVICVQEVRMPAAGSKGAPKNPGQLKDDTS 120 Query: 49 ----------------TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQA 92 + K I+ K + V+ Sbjct: 121 SSRDEKQVVLRALSSPPFKDYRVWWSLSDSKYAGTAMIIKKKFEPKKVSFNLDRTSSKHE 180 Query: 93 RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG 152 L + +G + + W KR L F ++++PLI+ G Sbjct: 181 PDGRVIIAEFESFLLLNTYAPNNGWKEEENSFQRRRKWDKRMLEFVQ---QVDKPLIWCG 237 Query: 153 DYNIIPQPHDCYNPII------WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYS 206 D N+ + D +P + Q L I + Y Sbjct: 238 DLNVSHEEIDVSHPDFFSSAKLNGYIPPNKEDCGQPGFTLSERRRFGNILSQGKLVDAYR 297 Query: 207 F------------WDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT----K 250 + W + + K +RID+ ++S + + S I RG Sbjct: 298 YLHKEKDMDCGFSWSGHPIGKYRGKRMRIDYFLVSEKLKDQIVSCDIH--GRGIELEGFY 355 Query: 251 PSDHTPVIVSL--DIPEPRKKQQD 272 SDH PV + L ++ P+ K + Sbjct: 356 GSDHCPVSLELSEEVEAPKPKSSN 379 >gi|189235831|ref|XP_966759.2| PREDICTED: similar to ap endonuclease, partial [Tribolium castaneum] Length = 344 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 49/212 (23%), Positives = 84/212 (39%), Gaps = 10/212 (4%) Query: 6 VATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETCGQ 62 + TWNV +R+ + +K + PDI+C+QETK P E Y + + Sbjct: 139 ITTWNVGGLRSWLKKGCLDILKYDEPDILCIQETKCAVDKLPEEVKTIEGYETLWCSSDK 198 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 Y GV I+ K +P+ ++ + + D + R I + + G + + Sbjct: 199 DGYAGVGIMVKDKPLNVIYGIDSKEHDTEGRCITVEYET---FFVVNVYVPNAGRKLVTL 255 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K + L+ ++P+I GD N+ + D NP +A FT+E R Sbjct: 256 P---KRLDWNEQFEKFIKNLDSQKPVIICGDMNVAHKEIDLANPKTNTKNAGFTVEERDG 312 Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYAD 213 G+ D R + Y+FW Y + Sbjct: 313 MTAFLGNGYVDIYRHLYPEKEKAYTFWTYMGN 344 >gi|242078097|ref|XP_002443817.1| hypothetical protein SORBIDRAFT_07g002730 [Sorghum bicolor] gi|241940167|gb|EES13312.1| hypothetical protein SORBIDRAFT_07g002730 [Sorghum bicolor] Length = 369 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 55/311 (17%), Positives = 92/311 (29%), Gaps = 59/311 (18%) Query: 5 TVATWNVNSIRARIH----NLAAWIKENNPDIICLQETKTE------------------- 41 TWN NS+ R+ + + +PD+IC+QE + Sbjct: 50 KFLTWNANSLLLRMKSDWPAFSQLVARLDPDVICVQEVRMPAAGSKGAPKNPSELKDDTS 109 Query: 42 ----DKN-----FPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQA 92 +K + K + K + V+ Sbjct: 110 SSRDEKQVVLRALSTSPFKDYRVWWSLSDSKYAGTAMFIKKKFEPKKVSFNLDRTSSKHE 169 Query: 93 RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG 152 L + +G + + W KR L F ++PLI+ G Sbjct: 170 TDGRVIIAEFESFLLLNTYAPNNGWKEEENSFQRRRKWDKRMLEFVQHV---DKPLIWCG 226 Query: 153 DYNIIPQPHDCYNPIIW---------------ENDACFTL-EVRQSFQKLQNMGFTDAIR 196 D N+ + D +P + FT E R+ L DA R Sbjct: 227 DLNVSHEEIDVSHPDFFSSAKLNGYTPPNQEDCGQPGFTPAERRRFGNILFQGKLVDAYR 286 Query: 197 ATHDTHHLYSFWDYYADSWSKNKG--IRIDHIMLSPEATSLLHSARIDTKPRGWT----K 250 H + + + K +G +RID+ ++S + + S + RG Sbjct: 287 HLHKEKDMDGGFSWSGHPIGKYRGKRMRIDYFLVSEQLKDRIVSCEMH--GRGIELDGFY 344 Query: 251 PSDHTPVIVSL 261 SDH PV + L Sbjct: 345 GSDHCPVTLEL 355 >gi|320163021|gb|EFW39920.1| apurinic/apyrimidinic endonuclease 2 [Capsaspora owczarzaki ATCC 30864] Length = 734 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 46/305 (15%), Positives = 81/305 (26%), Gaps = 50/305 (16%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEI- 79 L + DI+C QETK E Y + +G + ++ + Sbjct: 207 LFQLLDALQADIVCFQETKLTAAQVTEEMALVDGYDAFFSFSIAKDGYSGIATPIAAQDG 266 Query: 80 -----------------------------------VTHLPGDDLDVQARFIEATFTINTQ 104 + + Sbjct: 267 LTGRRVVKPPEPSSASVTSVPLQTGDVIKPDGLLPDYSDMDPTVLDALDSEGRCVVTDHD 326 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 + NLY P + + K + + + +I AGD+N+ + D Sbjct: 327 RFVLFNLYCPRADSAEGERMTFKQEFYRVLQLRVNALRTAGRCVIVAGDFNLTHRRIDHC 386 Query: 165 NPIIWENDACFTLEVRQ----SFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNK 219 +P + D + G D R H Y+ W + N Sbjct: 387 DPENYTTDDGSVDFEAHPSRRWMESFLAEGRVDCFRHFHPLLSSRYTCWRVDTRARETNY 446 Query: 220 GIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV----SLDIPEPRKKQQDSTS 275 G RID+I+ + T+ G SDH PV++ +L + P++ Sbjct: 447 GTRIDYIVTDQALLPDISGCYHLTRFPG----SDHCPVVITAAPTLRLTIPQRNP-PKLC 501 Query: 276 QNMKP 280 P Sbjct: 502 ARYLP 506 >gi|87303227|ref|ZP_01086020.1| Exodeoxyribonuclease III xth [Synechococcus sp. WH 5701] gi|87282122|gb|EAQ74083.1| Exodeoxyribonuclease III xth [Synechococcus sp. WH 5701] Length = 117 Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats. Identities = 32/85 (37%), Positives = 42/85 (49%) Query: 188 NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRG 247 + D R +S+WDY + +W ++ G RIDHI LS E RI RG Sbjct: 21 DERQADVFRLFEPDSGHWSWWDYRSGAWDRDSGWRIDHIYLSEELQERATGCRIQKAVRG 80 Query: 248 WTKPSDHTPVIVSLDIPEPRKKQQD 272 KPSDH PV+V L P +K +D Sbjct: 81 NDKPSDHAPVVVQLQWPPESEKNED 105 >gi|189238808|ref|XP_001815482.1| PREDICTED: similar to ap endonuclease, partial [Tribolium castaneum] Length = 1545 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 43/227 (18%), Positives = 79/227 (34%), Gaps = 17/227 (7%) Query: 38 TKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA 97 TK+ P + + L K + P + + Sbjct: 1335 TKSPKGKAP---------NFHITTWNVDGLRSWLKKGCLDILKYDKPDILCIQETKCAVY 1385 Query: 98 TFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII 157 +T+ + + +L G + + K + L+ ++P+I GD N+ Sbjct: 1386 KLPEEVKTIEVIHSHLLTGRNLVTLP---KRLDWNEQFEKFIKNLDSQKPVIICGDMNVA 1442 Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWS 216 + D NP N A F++E R G+ D R + Y+FW Y ++ Sbjct: 1443 HKEIDLANPKTNTNSAGFSVEERDGMTAFLGNGYVDIYRHLYPEKEKAYTFWIYMRNARP 1502 Query: 217 KNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 N G R+D+ ++S + I + G SDH P+ + + I Sbjct: 1503 NNVGWRLDYFLVSQRFVDNVCDNIIHSDVMG----SDHCPLSLHIQI 1545 Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%) Query: 6 VATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFET 49 + TWNV+ +R+ + +K + PDI+C+QETK P E Sbjct: 1347 ITTWNVDGLRSWLKKGCLDILKYDKPDILCIQETKCAVYKLPEEV 1391 >gi|86356381|ref|YP_468273.1| exodeoxyribonuclease III protein [Rhizobium etli CFN 42] gi|86280483|gb|ABC89546.1| probable exodeoxyribonuclease III protein [Rhizobium etli CFN 42] Length = 90 Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats. Identities = 49/87 (56%), Positives = 61/87 (70%) Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 + RQ+F++L+N+G TDA+RAT D LYSFWDY A +W KN GIRIDH++LSPEA Sbjct: 1 MPQTRQAFRRLENLGLTDAVRATTDATRLYSFWDYQAGAWPKNNGIRIDHLLLSPEAADR 60 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262 + SA I+ R W KPSDH PVI D Sbjct: 61 MTSAAIEKHVRAWEKPSDHVPVIAYFD 87 >gi|23010906|ref|ZP_00051436.1| COG0708: Exonuclease III [Magnetospirillum magnetotacticum MS-1] Length = 155 Score = 99.9 bits (247), Expect = 3e-19, Method: Composition-based stats. Identities = 55/137 (40%), Positives = 85/137 (62%), Gaps = 3/137 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + TWNVNSI+ R+ +L ++ E PD++CLQE K +D++FP +++ Y +ET GQK Sbjct: 1 MRITTWNVNSIKQRVGHLLGFLDEAKPDVVCLQELKCQDESFPRAEIEAAGYAVETLGQK 60 Query: 64 SYNGV--AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ-TLRIGNLYLPHGNPIT 120 +YNGV + + Q E++ LPGD D QAR+IEA +RI ++YLP+GNP Sbjct: 61 AYNGVALLVRTPLQYTELLRGLPGDAEDGQARYIEALVQGEGVAPVRIASIYLPNGNPAP 120 Query: 121 STKYDDKISWIKRFLRF 137 KY K++++ R Sbjct: 121 GPKYSYKLAFMARLRTH 137 >gi|302519814|ref|ZP_07272156.1| exodeoxyribonuclease III [Streptomyces sp. SPB78] gi|302428709|gb|EFL00525.1| exodeoxyribonuclease III [Streptomyces sp. SPB78] Length = 191 Score = 99.5 bits (246), Expect = 4e-19, Method: Composition-based stats. Identities = 40/185 (21%), Positives = 69/185 (37%), Gaps = 4/185 (2%) Query: 1 MSVVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 M+V+ V + NVN +RA W+ + D++CLQE + E P E + + Sbjct: 1 MTVLIVTSVNVNGLRAAAKKGFTEWLAGTSADVLCLQEVRAEAHQLPEEVARPEGWFSLH 60 Query: 60 CG--QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 K GV++ ++ +P + T + D R++EA T + G Sbjct: 61 APAADKGRAGVSLYTRREPDRVRTGFGSAEFDGSGRYVEADLPGVTVA-SLYLPSGEVGT 119 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 KY ++ + ++ GD+NI D N +A F Sbjct: 120 ERQEQKYRFMDEFLTYLKELRERAAAEGREVLVCGDWNIAHTEADLKNWRGNRKNAGFLP 179 Query: 178 EVRQS 182 E R+ Sbjct: 180 EEREW 184 >gi|226531290|ref|NP_001144669.1| hypothetical protein LOC100277695 [Zea mays] gi|195645474|gb|ACG42205.1| hypothetical protein [Zea mays] gi|238007716|gb|ACR34893.1| unknown [Zea mays] Length = 373 Score = 99.5 bits (246), Expect = 5e-19, Method: Composition-based stats. Identities = 55/311 (17%), Positives = 92/311 (29%), Gaps = 59/311 (18%) Query: 5 TVATWNVNSIRARIH----NLAAWIKENNPDIICLQETKTE------------------- 41 TWN NS+ R+ + + +PD+IC+QE + Sbjct: 52 KFLTWNANSLLLRMKSDWPAFSQLVARLDPDVICVQEVRMPAAGSKGAPKNPSELKDDTS 111 Query: 42 ----DKN-----FPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQA 92 +K + K + K + V+ Sbjct: 112 LSRDEKQVVLRALSASPFKDYRVWWSLSDSKYAGTAMFIKKKFEPKKVSFNLDRTSSKHE 171 Query: 93 RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG 152 L + +G + + W KR L F ++PLI+ G Sbjct: 172 ADGRVIIAEFESFLLLNTYSPNNGWKEEENAFQRRRKWDKRMLEFVQHV---DKPLIWCG 228 Query: 153 DYNIIPQPHDCYNPIIW---------------ENDACFTL-EVRQSFQKLQNMGFTDAIR 196 D N+ + D +P + FT E R+ L DA R Sbjct: 229 DLNVSHEEIDVSHPDFFSSAKLNGYTPPNKEDCGQPGFTPAERRRFGNILFQGKLVDAYR 288 Query: 197 ATHDTHHLYSFWDYYADSWSKNKG--IRIDHIMLSPEATSLLHSARIDTKPRGWT----K 250 H + + + K +G +RID+ ++S + + S + RG Sbjct: 289 HLHKEKDIDGGFSWSGHPIGKYRGKRMRIDYFLVSEQLKDRIVSCEMH--GRGIELDGFY 346 Query: 251 PSDHTPVIVSL 261 SDH PV + L Sbjct: 347 GSDHCPVSLEL 357 >gi|205373614|ref|ZP_03226417.1| exodeoxyribonuclease [Bacillus coahuilensis m4-4] Length = 195 Score = 99.1 bits (245), Expect = 5e-19, Method: Composition-based stats. Identities = 33/132 (25%), Positives = 62/132 (46%), Gaps = 5/132 (3%) Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG 190 + ++ +L ++P+IF GD N+ D N + ++ FT R+ L ++G Sbjct: 66 WEDLVQGYLDKLNQKKPVIFCGDLNVAHTELDVKNDRANQGNSGFTQVEREKMNGLLDLG 125 Query: 191 FTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT 249 FTD R + +++W Y +N G RID+ ++S + + ++ I G Sbjct: 126 FTDTYRYFNPARDDQFTWWSYMKGVRERNIGWRIDYFIVSTSFMNTISNSDIHDHVYG-- 183 Query: 250 KPSDHTPVIVSL 261 SDH P+++ L Sbjct: 184 --SDHCPIVLEL 193 >gi|302824275|ref|XP_002993782.1| hypothetical protein SELMODRAFT_137611 [Selaginella moellendorffii] gi|300138378|gb|EFJ05148.1| hypothetical protein SELMODRAFT_137611 [Selaginella moellendorffii] Length = 351 Score = 99.1 bits (245), Expect = 6e-19, Method: Composition-based stats. Identities = 57/312 (18%), Positives = 104/312 (33%), Gaps = 56/312 (17%) Query: 5 TVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTEDKNF------PFETLQS-- 52 +WN NS+ R N + ++I+ +PD+IC+QE + F P E Sbjct: 34 RFMSWNANSLLLRFKNNREEVMSFIRGFDPDVICIQEVRLPAAGFKGEKKNPGEIKDDSA 93 Query: 53 ------------------LNYHIETCGQKSYN-GVAILSKYQPIEIVTHLPGDDLDVQAR 93 +Y + ++ G A+ K + D+ A+ Sbjct: 94 AARNDKQAVMRVLSVSPMADYSVWWSLGENKYAGTALFVKNCFKPVSVAFNIDNKGKDAQ 153 Query: 94 FIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLE-LEEPLIFAG 152 E I L + + ++ + + + + + +PLI+ G Sbjct: 154 RHEIDGRIILAEFGSFTLLNTYAPNNGWKEEENGFVRRRAWDKKVLEFVSSCSKPLIWCG 213 Query: 153 DYNIIPQPHDCYNPIIWENDACFTL----------------EVRQSFQKLQNMGFTDAIR 196 D N+ Q D +P + N E + L D R Sbjct: 214 DLNVSHQEIDVTHPEFFANATQPGYTPPNKEDAGQPGFTLNERARFSTILNRGNLVDTYR 273 Query: 197 ATHDTHHLYSFWDYYADSWSKNKG--IRIDHIMLSPEATSLLHSARIDTKPRGWT----K 250 H+ L + + + + K +G +RID+ ++S L S++I RG Sbjct: 274 HLHEKQDLEAGFTWSGNPVGKYRGKRMRIDYFLISKALLPRLASSKIH--GRGIELEGFL 331 Query: 251 PSDHTPVIVSLD 262 SDH P+ + L Sbjct: 332 GSDHCPLTMELK 343 >gi|325067231|ref|ZP_08125904.1| exodeoxyribonuclease III [Actinomyces oris K20] Length = 98 Score = 99.1 bits (245), Expect = 6e-19, Method: Composition-based stats. Identities = 28/86 (32%), Positives = 45/86 (52%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +ATWNVNSIR R+ + A+++ + D + +QE K FP E ++ Y + G Sbjct: 1 MRLATWNVNSIRTRVDRVLAFLEREDIDALAMQEIKCRPDQFPVEPFEAAGYELAIHGLN 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLD 89 +NGVAI S+ ++ T P Sbjct: 61 QWNGVAIASRVGLDDVATSFPSQPAW 86 >gi|325068218|ref|ZP_08126891.1| exodeoxyribonuclease III Xth [Actinomyces oris K20] Length = 154 Score = 99.1 bits (245), Expect = 6e-19, Method: Composition-based stats. Identities = 29/149 (19%), Positives = 52/149 (34%), Gaps = 3/149 (2%) Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 G KY R + + ++ AGD N++ D N N Sbjct: 5 GTEKMDQKYAHLELVDARMAELLAAARDGGSQVVMAGDLNVVRSERDIKNWKPNHNKIAG 64 Query: 176 TLEVRQSFQKLQNMGFTDAIRAT---HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 ++ + + + Y++W ++ N G RID+ +L+P Sbjct: 65 VMDEEIAHLEGWFASGWVDASRHLVGDEEQGPYTWWSQRGKAFDNNTGWRIDYQVLTPAL 124 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 HS +D P ++ SDH P++V Sbjct: 125 AERAHSVTVDRAPDYASRWSDHAPLVVEY 153 >gi|213420904|ref|ZP_03353970.1| exonuclease III [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 144 Score = 98.7 bits (244), Expect = 7e-19, Method: Composition-based stats. Identities = 33/142 (23%), Positives = 56/142 (39%), Gaps = 7/142 (4%) Query: 129 SWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFTLEVRQS 182 + + + L+ + P++ GD NI P + + F E R+ Sbjct: 3 QFYQNLQNYLETELKCDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREW 62 Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +L G D R + +S++DY + + N+G+RID ++ S I Sbjct: 63 MSRLLKWGLVDTFRQANPQTMDKFSWFDYRSKGFVDNRGLRIDLLLASAPLAERCAETGI 122 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 D R KPSDH PV + + Sbjct: 123 DYDIRSMEKPSDHAPVWATFRV 144 >gi|255540403|ref|XP_002511266.1| ap endonuclease, putative [Ricinus communis] gi|223550381|gb|EEF51868.1| ap endonuclease, putative [Ricinus communis] Length = 326 Score = 98.7 bits (244), Expect = 8e-19, Method: Composition-based stats. Identities = 39/275 (14%), Positives = 81/275 (29%), Gaps = 17/275 (6%) Query: 4 VTVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 + TWN NS+ R N ++ +PD+I +QE + +T Sbjct: 42 LKFITWNANSLLLRAKNDWPEFTKFVSTLDPDVIAIQEVRMPAAGSKGAPKNPGELKDDT 101 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 + + + + P + D + +++ G Sbjct: 102 SSSREEKQILMRALSSPPFGSYKIWWSLADSKYAGTALLVKKRFHNIKVSFSLDKSGGDS 161 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY-----NPIIWENDAC 174 K DK + + + + ++ + D Sbjct: 162 FREKKMDKRMLEFVVQLSDKPLIWCGDLNVSHEEIDVSHPEFFIAAKQNGYVPPNKEDCG 221 Query: 175 FT----LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG--IRIDHIML 228 E ++ L+ DA R H + + + + K +G +RID+ ++ Sbjct: 222 QPGFTLNERKRFGSILREGKLIDAYRFLHKEKDMERGFSWSGNPIGKYRGKRMRIDYFIV 281 Query: 229 SPEATSLLHSARIDTK--PRGWTKPSDHTPVIVSL 261 S + + S + + SDH PV + L Sbjct: 282 SEKLKGRIISCEMHGQGIELQGFYGSDHCPVSLEL 316 >gi|121730147|ref|ZP_01682543.1| ggdef family protein [Vibrio cholerae V52] gi|121628108|gb|EAX60646.1| ggdef family protein [Vibrio cholerae V52] Length = 63 Score = 98.7 bits (244), Expect = 8e-19, Method: Composition-based stats. Identities = 24/63 (38%), Positives = 42/63 (66%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V ++N+N +RAR+H L A I ++ PD+I LQE K D+ FP + ++++ Y + GQK Sbjct: 1 MKVISFNINGLRARLHQLQALIDKHQPDVIGLQEIKVHDEAFPRQEVEAMGYQVYFHGQK 60 Query: 64 SYN 66 ++ Sbjct: 61 AHY 63 >gi|270009978|gb|EFA06426.1| hypothetical protein TcasGA2_TC009305 [Tribolium castaneum] Length = 1118 Score = 98.7 bits (244), Expect = 8e-19, Method: Composition-based stats. Identities = 33/134 (24%), Positives = 56/134 (41%), Gaps = 5/134 (3%) Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG 190 + L+ ++P+I GD N+ + D NP N A F++E R G Sbjct: 989 WNEQFEKFIKNLDSQKPVIICGDMNVAHKEIDLANPKTNTNSAGFSVEERDGMTAFLGNG 1048 Query: 191 FTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT 249 + D R + Y+FW Y ++ N G R+D+ ++S + I + G Sbjct: 1049 YVDIYRHLYPEKEKAYTFWIYMRNARPNNVGWRLDYFLVSQRFVDNVCDNIIHSDVMG-- 1106 Query: 250 KPSDHTPVIVSLDI 263 SDH P+ + + I Sbjct: 1107 --SDHCPLSLHIQI 1118 Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%) Query: 6 VATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFET 49 + TWNV+ +R+ + +K + PDI+C+QETK P E Sbjct: 928 ITTWNVDGLRSWLKKGCLDILKYDKPDILCIQETKCAVYKLPEEV 972 >gi|153823973|ref|ZP_01976640.1| exodeoxyribonuclease III [Vibrio cholerae B33] gi|126518510|gb|EAZ75733.1| exodeoxyribonuclease III [Vibrio cholerae B33] Length = 145 Score = 98.3 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 37/145 (25%), Positives = 58/145 (40%), Gaps = 7/145 (4%) Query: 125 DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFTLE 178 K + + + + + E L+ GD NI P + F E Sbjct: 1 PYKRQFYRDLMTYLREHRSNSERLVVMGDINISPLDLDIGIGEANRKRWLQTGKCSFQPE 60 Query: 179 VRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 R+ Q L + G D R H +S++DY + + N+G+RID I+ +P Sbjct: 61 EREWLQTLLDWGLVDTFRQLHPDVSDQFSWFDYRSRGFEDNRGLRIDVILATPTLAETCQ 120 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLD 262 A ID + R KPSDH P+ + Sbjct: 121 EAGIDYELRAIDKPSDHAPIWTTFK 145 >gi|167860654|gb|ACA05109.1| exodeoxyribonuclease III [Flammeovirga yaeyamensis] Length = 208 Score = 98.3 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 47/213 (22%), Positives = 87/213 (40%), Gaps = 7/213 (3%) Query: 50 LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 + L + G + ++ +E ++ G + T + + Sbjct: 1 FKDLGFKYHYWHSAEKKGYSGVAILSKVEAISTKIGME-IDTYDCEGRTILCEFENFTLI 59 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 N Y P G + K ++ + + ++ E + L+ GD+NI + D +NP Sbjct: 60 NTYFPSG-TSGEERQKFKYQFLDDYFEYIAKLKENYKNLVVCGDFNICHKAIDIHNPERN 118 Query: 170 ENDACFTL-EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 +N + F E + + GF DA R ++ YS+W Y A + KN G RID+ M+ Sbjct: 119 KNTSGFQPAEREWVSKFINEGGFIDAFRKFDESPGKYSWWTYRAGARKKNLGWRIDYFMV 178 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 E + L S+++ + SDH P+ + L Sbjct: 179 QKEMENTLISSQLHNEA----VHSDHCPIEIVL 207 >gi|227889347|ref|ZP_04007152.1| exodeoxyribonuclease III [Lactobacillus johnsonii ATCC 33200] gi|227850149|gb|EEJ60235.1| exodeoxyribonuclease III [Lactobacillus johnsonii ATCC 33200] Length = 179 Score = 98.3 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 5/134 (3%) Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG 190 + R +L +P+I GD ++ + D P + FT R+ +L N G Sbjct: 47 WAQTFRNYVTKLMQYKPVIIGGDMSVAHERIDLAEPDDNHHRPGFTGIERKEVFELLNAG 106 Query: 191 FTDAIRATHDTHHLYSFWDYYAD-SWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT 249 F D R H Y++W Y + ++N G R+D+ ++S L +A+I + G Sbjct: 107 FIDTFRYFHPDEAKYTYWSYRDKEARAENLGWRLDYFLVSNNLEDKLTNAKILSNIMG-- 164 Query: 250 KPSDHTPVIVSLDI 263 SDH P+ + +DI Sbjct: 165 --SDHCPIELDVDI 176 >gi|302823174|ref|XP_002993241.1| hypothetical protein SELMODRAFT_187330 [Selaginella moellendorffii] gi|300138911|gb|EFJ05662.1| hypothetical protein SELMODRAFT_187330 [Selaginella moellendorffii] Length = 351 Score = 98.3 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 56/312 (17%), Positives = 103/312 (33%), Gaps = 56/312 (17%) Query: 5 TVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTEDKNFPFETLQS-------- 52 +WN NS+ R N + ++I+ +PD+IC+QE + F E Sbjct: 34 RFMSWNANSLLLRFKNNREEVMSFIRGFDPDVICIQEVRLPAAGFKGEKKNPGEIKDDSA 93 Query: 53 ------------------LNYHIETCGQKSYN-GVAILSKYQPIEIVTHLPGDDLDVQAR 93 +Y + ++ G A+ K + D+ A+ Sbjct: 94 AARNDKQAVMRVLSVSPMADYSVWWSLGENKYAGTALFVKNCFKPVSVAFNIDNKGKDAQ 153 Query: 94 FIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLE-LEEPLIFAG 152 E I L + + ++ + + + + + +PLI+ G Sbjct: 154 RHEIDGRIILAEFGSFTLLNTYAPNNGWKEEENGFVRRRAWDKKVLEFVSSCSKPLIWCG 213 Query: 153 DYNIIPQPHDCYNPIIWENDACFTL----------------EVRQSFQKLQNMGFTDAIR 196 D N+ Q D +P + N E + L D R Sbjct: 214 DLNVSHQEIDVTHPEFFANATQPGYTPPNKEDAGQPGFTLNERARFSAILNRGNLVDTYR 273 Query: 197 ATHDTHHLYSFWDYYADSWSKNKG--IRIDHIMLSPEATSLLHSARIDTKPRGWT----K 250 H+ L + + + + K +G +RID+ ++S L S++I RG Sbjct: 274 HLHEKQDLEAGFTWSGNPVGKYRGKRMRIDYFLISKALLPRLASSKIH--GRGIELEGFL 331 Query: 251 PSDHTPVIVSLD 262 SDH P+ + L Sbjct: 332 GSDHCPLTMELK 343 >gi|281338530|gb|EFB14114.1| hypothetical protein PANDA_009240 [Ailuropoda melanoleuca] Length = 363 Score = 98.3 bits (243), Expect = 1e-18, Method: Composition-based stats. Identities = 52/282 (18%), Positives = 91/282 (32%), Gaps = 34/282 (12%) Query: 2 SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 S +++ T NVN + A I +A WIK ++P I CLQET E K+ ++ Sbjct: 5 SYLSIITLNVNGLNAPIKQHRVADWIKRHDPSICCLQETHFEPKDTSRLKVKGWRTIFHA 64 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 + GVAIL+ + + + + I Sbjct: 65 SRPQKKAGVAILTSDRLDF--------------KLKTIVRDTEGHYIILKGSIQQVDMTI 110 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + ++ + + +++ + GD N D E Sbjct: 111 INIYAPNRGAARYTSQLLTKIKRHIDKNTVIVGDLNTPLSEIDRTPWQKLSK------ES 164 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + L + D R H YSF+ ++S RIDH + S Sbjct: 165 KALNAILDELDLIDIYRTLHPRTKEYSFYSNAHGTFS-----RIDHALGHKTGLSQYQKI 219 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 I SDH + + L+ K ++S + ++ I Sbjct: 220 EIIPCI-----FSDHNALKLELN--HKEKPGRNSNTWRLRTI 254 >gi|87303809|ref|ZP_01086533.1| Exodeoxyribonuclease III xth [Synechococcus sp. WH 5701] gi|87281674|gb|EAQ73663.1| Exodeoxyribonuclease III xth [Synechococcus sp. WH 5701] Length = 97 Score = 97.9 bits (242), Expect = 1e-18, Method: Composition-based stats. Identities = 34/87 (39%), Positives = 44/87 (50%), Gaps = 1/87 (1%) Query: 192 TDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP 251 D R +S+WDY + +W +++G RIDHI L E L S I RG KP Sbjct: 8 QDVFRVFEPDAGHWSWWDYRSGAWDRDRGWRIDHIYLCDELLGLARSCVIHKSVRGNDKP 67 Query: 252 SDHTPVIVSLDIPEPRKKQQDSTSQNM 278 SDH PV V LD P P +D ++N Sbjct: 68 SDHAPVSVDLDWP-PSDDDEDGHNEND 93 >gi|289616636|emb|CBI56586.1| unnamed protein product [Sordaria macrospora] Length = 641 Score = 97.6 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 51/314 (16%), Positives = 90/314 (28%), Gaps = 65/314 (20%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET---C 60 + + TWN + DI+ +QETK + K+ + + + + Sbjct: 3 LRITTWN--GEN---RTFQSMFDTLEVDIVVMQETKIQRKDLRDDMVLVPGWDVYFSLPK 57 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL------- 113 +K Y+GVAI ++ V G + F +IG Sbjct: 58 YKKGYSGVAIYTRSSKCCPVRAEEGITGVLCPPNSSTKFRDLPADQQIGGYPTPGQLSSD 117 Query: 114 -------------------------PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPL 148 T+ + + ++I + + + + Sbjct: 118 VDEAQLDSEGRCVILEFPAFVLIGVYSPATRDETRTEFRQAFIDAMDARVRNLIAMGKEV 177 Query: 149 IFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF----------------- 191 GD NII D TL+ S + + Sbjct: 178 FLCGDLNIIRNEMDTAGLPERLKKEAMTLDDFISTPSRRFLNQIVFGGRVIGEPDEGREK 237 Query: 192 ---TDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRG 247 D R H +Y+ W+ ++ N G RID+++ S A I G Sbjct: 238 PVLWDLCREFHPRRPGMYTCWETRKNARPGNYGSRIDYVLCSSGIKDWFVDANIQEGLLG 297 Query: 248 WTKPSDHTPVIVSL 261 SDH PV ++ Sbjct: 298 ----SDHCPVYATI 307 >gi|315282770|ref|ZP_07871101.1| exodeoxyribonuclease III [Listeria marthii FSL S4-120] gi|313613585|gb|EFR87398.1| exodeoxyribonuclease III [Listeria marthii FSL S4-120] Length = 139 Score = 97.6 bits (241), Expect = 2e-18, Method: Composition-based stats. Identities = 28/121 (23%), Positives = 49/121 (40%), Gaps = 2/121 (1%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + +E + DI CLQETK ++ + +Y + Sbjct: 1 MKLISWNVNGLRAAVKKGFLEYFEEVDADIFCLQETKLQEGQIELDLPAYKDY-WNYAVK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +P+ + L + D + R I F + Sbjct: 60 KGYSGTAIFTKVEPLSVQYGLGIPEHDTEGRVITLEFKEFFMVTVYTPNSQAELKRLDYR 119 Query: 123 K 123 Sbjct: 120 M 120 >gi|169850286|ref|XP_001831840.1| DNA-(apurinic or apyrimidinic site) lyase 2 [Coprinopsis cinerea okayama7#130] gi|116507128|gb|EAU90023.1| DNA-(apurinic or apyrimidinic site) lyase 2 [Coprinopsis cinerea okayama7#130] Length = 609 Score = 97.2 bits (240), Expect = 2e-18, Method: Composition-based stats. Identities = 44/325 (13%), Positives = 80/325 (24%), Gaps = 71/325 (21%) Query: 4 VTVATWNVNSIRA--------RIHNLAAWIKENNPDIICL-----------QETKTED-- 42 + + TWN+N +R + + DIIC QE Sbjct: 1 MRLLTWNINGVRTLPQYHPWNTLKTFDDILNHLESDIICFQEMKSGRKLLTQEVAVPPSF 60 Query: 43 KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI- 101 +F ++ Y +S V + ++ I+ P + + Sbjct: 61 DSFFSFPIKKTGYSGVATYTRSKVAVPLKAEEGLSGILQPKPPLAPEERISNYATYPPNL 120 Query: 102 ----------------------------NTQTLRIGNLYLPHGNPITSTKYDDKISWIKR 133 + I G + Sbjct: 121 LDDDMHDADDDRLDYKNLDSEGRAIVVDMGLFVLINTYCPNDGTGTEEREAFKMDYHRLL 180 Query: 134 FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT-LEVRQSFQKLQNMGFT 192 R + + +I GD N D + LE + F + + Sbjct: 181 ETRVRGLIEKEKREVIVVGDLNACAAVIDHCEGELMIKKGQAMGLEGEEGFWGKEYRRWI 240 Query: 193 DAI----------------RATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 + D +Y+ W+ + N G RID I+++P + Sbjct: 241 RDWLVKEDGTGGTLVDITRKLWPDREGMYTCWNTKISARETNYGTRIDFILVTPGLVPWI 300 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSL 261 ++ K SDH PV Sbjct: 301 KASDTLPNI----KGSDHCPVYADF 321 >gi|254993774|ref|ZP_05275964.1| 3'-exo-deoxyribonuclease exoA [Listeria monocytogenes FSL J2-064] Length = 150 Score = 97.2 bits (240), Expect = 3e-18, Method: Composition-based stats. Identities = 35/156 (22%), Positives = 67/156 (42%), Gaps = 8/156 (5%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + +WNVN +RA + + +E + DI CLQETK ++ + +Y + Sbjct: 1 MKLISWNVNGLRAAVKKGFLEYFEEVDADIFCLQETKLQEGQIELDLPAYKDY-WNYAVK 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K +P+ + L + D + R I F + Sbjct: 60 KGYSGTAIFTKVEPLSVQYGLGVPEHDTEGRVITLEFEEF-----FMVTVYTPNSQAELK 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP 158 + D ++++ L + L+ +P++ GD N+ Sbjct: 115 RLDYRMTFEDAILEYVK-NLDKTKPVVLCGDLNVAH 149 >gi|34392581|dbj|BAC82623.1| pol-like protein [Ciona intestinalis] Length = 1235 Score = 96.8 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 41/277 (14%), Positives = 89/277 (32%), Gaps = 31/277 (11%) Query: 4 VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + ++NVN +R A+ + ++K D+I LQET + +E Sbjct: 1 MKIVSFNVNGLRNNAKRKCIFRFLKNKKFDVILLQETHSSLD-------------VEVMW 47 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 ++ + + + L P + + Sbjct: 48 KREWGNAPTFFSHGTTSARGVCILLSPQQNWTVHHTESDTEGRFLIASISAGPKRLTLAN 107 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + + I F L+ I GD+N I +P + + E++ Sbjct: 108 VYGPNSDNPIFFDSFFGIINDYLDNDAIIGGDFNAILSNDLDKSPGNKHANGKSSSEIKN 167 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 + D R + +S + ++ G RID ++S T + + I Sbjct: 168 YMK---EFDLVDIFRELNPRQRRFS--RVQQNPFT---GSRIDFFLVSEGLTPHIKNCDI 219 Query: 242 DTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278 + + SDH V+++++ P+ K+ + Sbjct: 220 EPSIK-----SDHRLVVLNIN---PQFKENGPGYWKL 248 >gi|255597554|ref|XP_002536800.1| ap endonuclease, putative [Ricinus communis] gi|223518503|gb|EEF25584.1| ap endonuclease, putative [Ricinus communis] Length = 130 Score = 96.8 bits (239), Expect = 3e-18, Method: Composition-based stats. Identities = 30/120 (25%), Positives = 52/120 (43%), Gaps = 5/120 (4%) Query: 145 EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNM-GFTDAIRATHDTHH 203 ++ GD+NI + D N + ++ F E R ++ + G D R Sbjct: 15 GREIVICGDWNIAHKEIDLKNWKSNQKNSGFLPEERAWMTRIFDELGLVDVHRGIDQRPE 74 Query: 204 LYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 Y++W +W+KN G RID+ + +P + H+ I R SDH P+I+ + Sbjct: 75 QYTWWSNRGQAWAKNVGWRIDYHVATPGIAARAHAVSIYKDER----FSDHAPLIIDYHL 130 >gi|331657785|ref|ZP_08358747.1| exodeoxyribonuclease III (Exonuclease III) (EXO III) (APendonuclease VI) [Escherichia coli TA206] gi|331056033|gb|EGI28042.1| exodeoxyribonuclease III (Exonuclease III) (EXO III) (APendonuclease VI) [Escherichia coli TA206] Length = 123 Score = 96.0 bits (237), Expect = 5e-18, Method: Composition-based stats. Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 1/101 (0%) Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKG 220 + + F E R+ ++L + G D R + +S++DY + + N+G Sbjct: 21 ENRKRWLRTGKCSFLPEEREWMERLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRG 80 Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +RID ++ S ID + R KPSDH PV + Sbjct: 81 LRIDLLLASQPLAECCVETGIDYEIRSMEKPSDHAPVWATF 121 >gi|221055699|ref|XP_002258988.1| AP endonuclease (DNA-(apurinic or apyrimidinic site) lyase) [Plasmodium knowlesi strain H] gi|193809058|emb|CAQ39761.1| AP endonuclease (DNA-(apurinic or apyrimidinic site) lyase), putative [Plasmodium knowlesi strain H] Length = 516 Score = 96.0 bits (237), Expect = 6e-18, Method: Composition-based stats. Identities = 52/332 (15%), Positives = 95/332 (28%), Gaps = 76/332 (22%) Query: 5 TVATWNVNSIRARIHN------LAAWIKENNPDIICLQETKTED---------------- 42 T+ TWN+NSI R N ++ N D++C QE + Sbjct: 183 TIVTWNMNSITVRYKNKEKWNAFMSFFNRINADVLCFQEVRLPALNLYDAKEAKDGERDR 242 Query: 43 -----------------KNFPFETLQSLN-YHIETCGQKSYNGVAILSKYQPIEIVTHLP 84 + E + N Y + S V + I +L Sbjct: 243 GKVKNTDQKSQVDFDIMEKILKEDFHNYNAYFSLANIKYSGQLVLVKRSIPIKSIRYNLS 302 Query: 85 GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL 144 D + + + + Y P+ ++ + + ++ F S Sbjct: 303 FDLDPREHHHEGRVIIVEFSKFYLLSTYTPNNGFEPVK-FERRRLFDEKLKEFVSVLRNK 361 Query: 145 EEPLIFAGDYNIIPQPHD--CYNPIIWENDACFTLEVRQSFQKLQ--------------- 187 ++ L++ GD NI P+ D E Sbjct: 362 KKNLVWTGDLNIAPEDTDLSHPAEFRRMKKGNVPKEFVGQPGCTDFERKNFRGILSAGDL 421 Query: 188 -NMGFTDAIRATHD---------------THHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 + A + ++Y++ + S NK +RIDH ++S + Sbjct: 422 IDSYRHLANLRANKGEPGKATHNRAVSDINDNIYTWRCPFLMGKSCNKAMRIDHFIVSRD 481 Query: 232 ATSLLHSARID--TKPRGWTKPSDHTPVIVSL 261 + + I + SDH PVI+ L Sbjct: 482 FMPNVENVEIHGYSVFHNNFYGSDHCPVILHL 513 >gi|258544338|ref|ZP_05704572.1| exodeoxyribonuclease III [Cardiobacterium hominis ATCC 15826] gi|258520418|gb|EEV89277.1| exodeoxyribonuclease III [Cardiobacterium hominis ATCC 15826] Length = 157 Score = 95.6 bits (236), Expect = 6e-18, Method: Composition-based stats. Identities = 42/155 (27%), Positives = 64/155 (41%), Gaps = 2/155 (1%) Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 + + + + + + I + GD+NI P D + Sbjct: 1 MFIVSVSAVNYRHEQKNLPKRYQARAIAASVGDVRVLNLYVPNGKAIGDFNITPADLDVH 60 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRID 224 +P W + + RQ+ + +G+ DA R H YS+WDY +N G+RID Sbjct: 61 DPDAWRDKILCSAPERQALADILALGYRDAYRNLHPDTVQYSWWDYRMGGLRRNIGMRID 120 Query: 225 HIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 + S LH A IDT+PR W +PSDH P V Sbjct: 121 LTLCSDNLA--LHDAGIDTEPRHWERPSDHAPAWV 153 >gi|237786126|ref|YP_002906831.1| putative exodeoxyribonuclease [Corynebacterium kroppenstedtii DSM 44385] gi|237759038|gb|ACR18288.1| putative exodeoxyribonuclease [Corynebacterium kroppenstedtii DSM 44385] Length = 361 Score = 95.6 bits (236), Expect = 7e-18, Method: Composition-based stats. Identities = 58/326 (17%), Positives = 94/326 (28%), Gaps = 70/326 (21%) Query: 2 SVVTVATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 + +TVA+ NVN IRA + W+K N D++ LQE + +K +L+ Sbjct: 35 ASLTVASINVNGIRAAVKHRSEENLGFHEWLKNANVDVVLLQEVRASEKQAEDALKPALD 94 Query: 55 YHI----ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 + + GV ILS Y ++ +P + + +R+ + Sbjct: 95 HGWSLTVAPAASRGRAGVGILSMYPVDDVEIGIPDFEDAGRWIEGTIHAGGGLGDVRLAS 154 Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170 LYLP G QR + ++ AGD+NI + D + Sbjct: 155 LYLPSGGWNEKQDEKYAFLDSLA--PVLEQRAGQYDKMLVAGDWNICHRREDLKSWKGNR 212 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG---------- 220 A F + R + G + +D N G Sbjct: 213 KKAGFLPDERAFMDSIFGPGPGVTVSEINDATEAPRGVTLSDGRRQGNAGAIGDFFASKD 272 Query: 221 ------------------------------------IR-----------IDHIMLSPEAT 233 R ID + Sbjct: 273 YQPSAASFRGPAKDPKWVDVQRSFHEDEEGPYSWYTWRGQAFDTGAGWRIDVHAATRSLA 332 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIV 259 +AR D + SDH+PV+V Sbjct: 333 ERAVAARTDVADTYDLRWSDHSPVVV 358 >gi|209521512|ref|ZP_03270215.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. H160] gi|209498042|gb|EDZ98194.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. H160] Length = 157 Score = 95.2 bits (235), Expect = 9e-18, Method: Composition-based stats. Identities = 33/81 (40%), Positives = 45/81 (55%) Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 +TDA+R +Y+FWDY+ W N G+RIDH++LS E L A +D RG Sbjct: 76 WTDALRTRFGDERVYTFWDYFRRHWDTNSGLRIDHLLLSAELAPRLRDAGVDRWVRGEPH 135 Query: 251 PSDHTPVIVSLDIPEPRKKQQ 271 SDH P + L++ RKKQ Sbjct: 136 ASDHAPTWIELEMGAGRKKQS 156 Score = 92.2 bits (227), Expect = 7e-17, Method: Composition-based stats. Identities = 36/110 (32%), Positives = 54/110 (49%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 M+ + +AT+N+N IR R+ L W+ PD++CLQE K D FP + L+ Y Sbjct: 1 MARLRIATFNLNGIRPRLAALLQWLVREAPDVVCLQELKAVDSAFPVDALRDAGYGAVWQ 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 GQ ++NGVAIL+K + + GD+ LRI + Sbjct: 61 GQSAWNGVAILAKGAWTDALRTRFGDERVYTFWDYFRRHWDTNSGLRIDH 110 >gi|46200513|gb|AAL73527.2|AF466200_6 putative AP endonuclease [Sorghum bicolor] Length = 348 Score = 94.9 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 53/293 (18%), Positives = 89/293 (30%), Gaps = 44/293 (15%) Query: 5 TVATWNVNSIRARIH----NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 TWN NS+ R+ + + +PD+IC+Q + + Sbjct: 50 KFLTWNANSLLLRMKSDWPAFSQLVARLDPDVICVQ---VVLRALSTSPFKDYRVWWSLS 106 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 K + K + V+ L + +G Sbjct: 107 DSKYAGTAMFIKKKFEPKKVSFNLDRTSSKHETDGRVIIAEFESFLLLNTYAPNNGWKEE 166 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW----------- 169 + + W KR L F ++PLI+ GD N+ + D +P + Sbjct: 167 ENSFQRRRKWDKRMLEFVQHV---DKPLIWCGDLNVSHEEIDVSHPDFFSSAKLNGYTPP 223 Query: 170 ----ENDACFTL-EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD----------- 213 FT E R+ L DA R H + + + Sbjct: 224 NQEDCGQPGFTPAERRRFGNILFQGKLVDAYRHLHKEKDMDGGFSWSGHPIGNEINFSAY 283 Query: 214 -SWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT----KPSDHTPVIVSL 261 S + K +RID+ ++S + + S + RG SDH PV + L Sbjct: 284 SSRYRGKRMRIDYFLVSEQLKDRIVSCEMH--GRGIELDGFYGSDHCPVTLEL 334 >gi|239792809|dbj|BAH72703.1| ACYPI007473 [Acyrthosiphon pisum] Length = 175 Score = 94.9 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 5/136 (3%) Query: 129 SWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN 188 R + L+ ++P++ GD N+ + D NP A FT E R + L Sbjct: 44 MKWDEAFRKYLKELDTKKPVVLTGDLNVAHEEIDIANPKTNTKSAGFTKEERDNMSLLLE 103 Query: 189 MGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRG 247 GF D R + Y+FW Y+ +S +KN G R+D+ + S + + I + G Sbjct: 104 QGFVDTFRTLNPEKTGAYTFWTYFHNSRAKNVGWRLDYFITSKRFMDNVCDSTIRNEVLG 163 Query: 248 WTKPSDHTPVIVSLDI 263 SDH P++ ++I Sbjct: 164 ----SDHCPIVFYINI 175 >gi|218677975|ref|ZP_03525872.1| exodeoxyribonuclease III Xth [Rhizobium etli CIAT 894] Length = 120 Score = 94.9 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 57/124 (45%), Positives = 76/124 (61%), Gaps = 5/124 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+NVN I R+ L W+KE+ PD+ CLQE K++D FP + ++ Y GQK Sbjct: 1 MKIATYNVNGINGRLAILLRWLKEDAPDVACLQELKSDDAGFPLKEIERAGYGAVWHGQK 60 Query: 64 SYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 S+NGVAIL+K PI LPGD D +R+IEA + IG LYLP+GNP ST Sbjct: 61 SWNGVAILAKGKTPILTRRGLPGDPDDTHSRYIEAVIDG----IVIGCLYLPNGNPFPST 116 Query: 123 KYDD 126 K+D Sbjct: 117 KFDY 120 >gi|68536781|ref|YP_251486.1| putative exodeoxyribonuclease [Corynebacterium jeikeium K411] gi|260579135|ref|ZP_05847027.1| exodeoxyribonuclease [Corynebacterium jeikeium ATCC 43734] gi|68264380|emb|CAI37868.1| putative exodeoxyribonuclease [Corynebacterium jeikeium K411] gi|258602734|gb|EEW16019.1| exodeoxyribonuclease [Corynebacterium jeikeium ATCC 43734] Length = 336 Score = 94.9 bits (234), Expect = 1e-17, Method: Composition-based stats. Identities = 62/334 (18%), Positives = 102/334 (30%), Gaps = 73/334 (21%) Query: 1 MSVVTVATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKNFPFET---L 50 M +T+AT NVN IRA + W+K D++ +QE + ++K L Sbjct: 1 MKSLTIATVNVNGIRAAAKVRHEDNQGILPWLKATPADVVLMQEVRADEKQTRAALEPVL 60 Query: 51 QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPG----DDLDVQARFIEATFTINTQTL 106 + K GVAILS+ ++ ++ R+IEAT + Sbjct: 61 DQWHLAQAPAAAKGRAGVAILSRLPLRDVQIGFGDGPGSEEFSDSGRYIEATVDAGDLPV 120 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEE----PLIFAGDYNIIPQPHD 162 R+ +LYLP G+ T + + S+ E+ L+ GD+NI + D Sbjct: 121 RVASLYLPSGSAGTEKQDEKYRFLDSFGEYLQSRADRAEQGGLPELVVGGDWNICHRRED 180 Query: 163 CYNPIIWENDACFTL------------EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDY 210 N + F ++ Q + DY Sbjct: 181 LKNWKTNRKKSGFLPDERAFMDSLLGTFPDEATQVADAEDAGRNGNPAGVAGDFFGAVDY 240 Query: 211 YAD--------------------------------SWSKNKG--------IRIDHIMLSP 230 SW +G RID + + Sbjct: 241 KPGDLAAARLAAGAAEEPHYFDVMRRVLPDQAGPYSWWTYRGQAFDTDAGWRIDLQVATR 300 Query: 231 EATSLLH---SARIDTKPRGWTKPSDHTPVIVSL 261 + +D + SDH+PV+V Sbjct: 301 GMLDRALTANNVWVDKAAAYDQRWSDHSPVLVEY 334 >gi|281337694|gb|EFB13278.1| hypothetical protein PANDA_006066 [Ailuropoda melanoleuca] Length = 357 Score = 94.5 bits (233), Expect = 1e-17, Method: Composition-based stats. Identities = 51/280 (18%), Positives = 91/280 (32%), Gaps = 34/280 (12%) Query: 4 VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 +++ + NVN + A I +A WIK ++P I CLQET E K+ ++ + G Sbjct: 1 LSIISLNVNGLNAPIKRHRVADWIKRHDPSICCLQETHFEPKDAFRLRVRGWSTIFHANG 60 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 + GVAIL + + + + I + Sbjct: 61 PQKKAGVAILISDRLDF--------------KLEAIERDTEGHYIILKGSIQQVDMTIIN 106 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 ++ + + +++ + GD N D E + Sbjct: 107 IYAPNRGAARYTSQLLTKIKRHIDKNTVIVGDLNTPLSEIDRTPWQKLSK------ESKA 160 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 L + D R H YSF+ ++S RIDH + S I Sbjct: 161 LNAILDELDLIDIYRTLHPRTKEYSFYSNAHGTFS-----RIDHALGHKTGLSQYQKIEI 215 Query: 242 DTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 SDH + + L+ K ++S + ++ I Sbjct: 216 IPCI-----FSDHNALKLELN--HKEKPGRNSNTWRLRTI 248 >gi|224133800|ref|XP_002321664.1| predicted protein [Populus trichocarpa] gi|222868660|gb|EEF05791.1| predicted protein [Populus trichocarpa] Length = 366 Score = 94.1 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 56/319 (17%), Positives = 101/319 (31%), Gaps = 52/319 (16%) Query: 4 VTVATWNVNSIRARIH----NLAAWIKENNPDIICLQETKTE----------------DK 43 + TWN NS+ R+ + ++ + +PD+I +QE + D Sbjct: 49 LKFITWNANSLLLRVKNNWPGFSKFVSDIDPDVIVIQEVRMPAAGSKGAPKNSGEIKDDT 108 Query: 44 NFPFETLQSL----------NYHIETCGQKSYN-GVAILSKYQPIEIVTHLPGDDLDVQA 92 N E + L NY++ S G A+L K + D + Sbjct: 109 NSSREEKKILMRALSSSPFGNYNVWWSLADSKYAGTALLVKKCFQPVKVSFALDQTASKH 168 Query: 93 RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG 152 +T R+ N Y P+ K + + + +L ++PLI+ G Sbjct: 169 EPDGRVILAEFKTFRLLNTYAPNNGWKEEEKSFQRRRKWDKRMLEVVVQLS-DKPLIWCG 227 Query: 153 DYNIIPQPHDCYNPIIW-----ENDACFTLEVRQSFQKL-----------QNMGFTDAIR 196 D N+ + D +P + E + DA R Sbjct: 228 DLNVSHEEIDVSHPEFFSAAKVNGYVPPNKEDCGQPGFTLSERKRFGAILKEGKLIDAYR 287 Query: 197 ATHDTHHLYSFWDYYADSWSKNKG--IRIDHIMLSPEATSLLHSARIDTK--PRGWTKPS 252 H + + + + K +G +RID ++S + + + S Sbjct: 288 FLHKERDMERGFSWSGNPIGKYRGKRMRIDFFIVSEKLKDRIIQCEMHGHGIELEGFYGS 347 Query: 253 DHTPVIVSLDIPEPRKKQQ 271 DH PV + L P + Sbjct: 348 DHCPVSLELSPASPDSNES 366 >gi|218672299|ref|ZP_03521968.1| exodeoxyribonuclease III protein [Rhizobium etli GR56] Length = 79 Score = 94.1 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 36/75 (48%), Positives = 51/75 (68%) Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 +TDA+R H +Y+FW Y+ +S+ ++ G+RIDH++LSP L SA + KPRGW Sbjct: 1 WTDAVRHLHPNERIYTFWKYWRNSFERDAGLRIDHLLLSPAVAPWLRSASVRRKPRGWEH 60 Query: 251 PSDHTPVIVSLDIPE 265 SDH PV++ LDIPE Sbjct: 61 TSDHAPVMIELDIPE 75 >gi|303286135|ref|XP_003062357.1| predicted protein [Micromonas pusilla CCMP1545] gi|226455874|gb|EEH53176.1| predicted protein [Micromonas pusilla CCMP1545] Length = 251 Score = 94.1 bits (232), Expect = 2e-17, Method: Composition-based stats. Identities = 49/238 (20%), Positives = 86/238 (36%), Gaps = 14/238 (5%) Query: 9 WNVNSIRARIHN----LAAWIKENNPDIICLQETKTEDKNFPFET--LQSLNYHIETCGQ 62 WNV +RA + L A + PD++CLQE K +D + T L++L T Sbjct: 13 WNVAGLRALMEKNPGTLRAIVDAERPDVLCLQEHKLQDVHVSDLTTKLKTLLPEYPTVRF 72 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ--TLRIGNLYLPHGNPIT 120 S + +V L G+ + E + G ++ Sbjct: 73 AVSTKKKGYSGVALLGVVEGLGGNGHAIGKHVDEGRLLTMEYETHWLVLAYVPNSGASLS 132 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP--IIWENDACFTLE 178 S ++ + +R L +P++F GD N+ D YN + A T E Sbjct: 133 SHRFPYDRVRWEADVRAYLTSLCASKPVVFGGDLNVAHLDADIYNVGAPHVKKSAGTTPE 192 Query: 179 VRQSFQKLQNM----GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 R +F +L D +++W + N+G+R+D+ + S + Sbjct: 193 ERAAFGELLATAGTPPGMSDTHFHPDATGWFTYWSQRVGNRPVNRGLRLDYFVASNDI 250 >gi|218264874|ref|ZP_03478549.1| hypothetical protein PRABACTJOHN_04259 [Parabacteroides johnsonii DSM 18315] gi|218221713|gb|EEC94363.1| hypothetical protein PRABACTJOHN_04259 [Parabacteroides johnsonii DSM 18315] Length = 297 Score = 93.7 bits (231), Expect = 3e-17, Method: Composition-based stats. Identities = 48/269 (17%), Positives = 83/269 (30%), Gaps = 14/269 (5%) Query: 4 VTVATWNV-NSI---RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 + V ++N+ N +R N WIK PDI+ + E + + + Sbjct: 30 LRVISYNIWNGFEHDASRRANFINWIKGQQPDILAMTELVGFTEKDLGQLASEYGHKYYA 89 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA-TFTINTQTLRIGNLYLPHGNP 118 ++ V I S + + G + + + L Sbjct: 90 IVKEEGYPVGITSNEPITVVKKQMEGFWHGMLHVKTHGLDMIVTHLSPHDWKFRLKEAQM 149 Query: 119 ITSTKYDDKISWIKRFLRFASQ-RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 +TS D+++ F + + + A + + D F Sbjct: 150 LTSYIQDNQLDNCMVMGDFNAYSPFDADWVETHAQLIENMQKWDAEQETYRNMRDGRFDY 209 Query: 178 EVRQSF-----QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 V F + + R T LY + + D+ G R+D+I++SP Sbjct: 210 SVLSKFLSIGLTDICRLYVPADKRTTFPAAFLYGW--QHGDTRLHGIGERLDYILVSPSL 267 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 S ARI SDH PV V L Sbjct: 268 VSRCLDARIHNGI-DTEGISDHYPVSVDL 295 >gi|290969209|ref|ZP_06560734.1| putative exodeoxyribonuclease III [Megasphaera genomosp. type_1 str. 28L] gi|290780715|gb|EFD93318.1| putative exodeoxyribonuclease III [Megasphaera genomosp. type_1 str. 28L] Length = 109 Score = 93.3 bits (230), Expect = 4e-17, Method: Composition-based stats. Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 5/111 (4%) Query: 156 IIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADS 214 + + D NP +A F+ R+ L GFTD R + +YS+W Y ++ Sbjct: 1 MAHEEIDLKNPKSNRKNAGFSDAEREKMTALLAAGFTDTWRHFYPQTADVYSWWSYRFNA 60 Query: 215 WSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 N G RID+ + S + T+ L +A I T G SDH PV ++ D P Sbjct: 61 RKNNAGWRIDYFITSQDLTNRLQNAFIYTDIMG----SDHCPVGLTWDCPS 107 >gi|159469514|ref|XP_001692908.1| predicted protein [Chlamydomonas reinhardtii] gi|158277710|gb|EDP03477.1| predicted protein [Chlamydomonas reinhardtii] Length = 264 Score = 92.9 bits (229), Expect = 4e-17, Method: Composition-based stats. Identities = 36/259 (13%), Positives = 68/259 (26%), Gaps = 57/259 (22%) Query: 4 VTVATWNVNSIRARIHNL---AAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 + + +WNVN +R I + ++ D++C+QE K + E + + Sbjct: 3 LRIVSWNVNGLRRVIAHFGSLDKFLSALEADVLCIQEHKLTRADLKRELALADGWESFFA 62 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + A+ + + + + Sbjct: 63 FTRGRELRALDGEGRVVITEHGALVLVNVYGPAITSEERAEERGAFK------------- 109 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 +++ + L L+ GD+NI P D Sbjct: 110 -------MTFFRALQHRLDGFLAAGRRLVVLGDFNISPAAADRA---------------- 146 Query: 181 QSFQKLQNMGFTDAIRATHDT--HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 Y+ W+ + + N G RID I+ Sbjct: 147 --------GATPRTFEPHRPDRLRDAYTCWNTSSGARVNNFGSRIDLILA----ADGTPG 194 Query: 239 ARIDTKPRGWTKPSDHTPV 257 A I +G SDH P+ Sbjct: 195 ADIMVDFQG----SDHAPL 209 >gi|83314890|ref|XP_730557.1| AP endonuclease-related [Plasmodium yoelii yoelii str. 17XNL] gi|23490314|gb|EAA22122.1| putative AP endonuclease-related [Plasmodium yoelii yoelii] Length = 554 Score = 92.9 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 49/341 (14%), Positives = 97/341 (28%), Gaps = 88/341 (25%) Query: 6 VATWNVNSIRARIHN------LAAWIKENNPDIICLQETKTED----------------- 42 + TWN+NSI R N ++ E N D++C QE + Sbjct: 211 IVTWNMNSITVRYKNREKWKRFIKFVNEINADVLCFQEVRLPALNVPKNGVKNGVKNGVK 270 Query: 43 ---------------------------------KNFPFETLQSLN-YHIETCGQKSYNGV 68 ++ + N Y + S V Sbjct: 271 NGVKNEVKNEDEERERGLVKNTDQKSMIDYKIVEDILKNDFKEYNSYFSLANIKYSGQLV 330 Query: 69 AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKI 128 + + + +L + + + + Y P+ K++ + Sbjct: 331 LVKKDIKVKSVRYNLLFETDPNIHNDEGRIILLEFSNFYLLSTYSPNNGF-DQIKFNRRK 389 Query: 129 SWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN 188 + ++ F + LI+ GD NI P+ D +PI + + Q Sbjct: 390 LYDEQMKNFVLFMKNENKNLIWTGDLNIAPEDIDLSHPIEFRKMKKGNVPKEYIGQPGCT 449 Query: 189 MGFTDAIRATHDT----------------------------HHLYSFWDYYADSWSKNKG 220 + + ++Y++ + S N+ Sbjct: 450 DAERENFKTILKNGNLVDSYRYFENYKIKNDPTYKKKTNINDNIYTWRCPFLIGKSCNRA 509 Query: 221 IRIDHIMLSPEATSLLHSARID--TKPRGWTKPSDHTPVIV 259 +RIDH ++S + + + I + SDH PVI+ Sbjct: 510 MRIDHFIVSKNLLNQIENVEIHGYSVSHTNFYGSDHCPVIL 550 >gi|196017560|ref|XP_002118569.1| hypothetical protein TRIADDRAFT_62597 [Trichoplax adhaerens] gi|190578721|gb|EDV18945.1| hypothetical protein TRIADDRAFT_62597 [Trichoplax adhaerens] Length = 150 Score = 92.9 bits (229), Expect = 5e-17, Method: Composition-based stats. Identities = 43/138 (31%), Positives = 62/138 (44%), Gaps = 5/138 (3%) Query: 127 KISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL 186 R Q L+ +P+I GD N+ D NP A FT E R+ F KL Sbjct: 17 YRQEWDADFRKYLQGLDRIKPVILCGDLNVSHLEIDLANPKTNTKTAGFTKEEREGFGKL 76 Query: 187 QNMGFTDAIRATHDTHH-LYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKP 245 + GF D R + YSFW Y +++ SKN G R+D+ + S + + I ++ Sbjct: 77 LDCGFIDTFRHFYPNKTSAYSFWSYMSNARSKNIGWRLDYFVTSKNLIPNVADSIIRSEI 136 Query: 246 RGWTKPSDHTPVIVSLDI 263 G SDH P+ + L I Sbjct: 137 EG----SDHCPIELLLQI 150 >gi|256080329|ref|XP_002576434.1| ap endonuclease [Schistosoma mansoni] gi|238661702|emb|CAZ32671.1| ap endonuclease, putative [Schistosoma mansoni] Length = 254 Score = 92.5 bits (228), Expect = 5e-17, Method: Composition-based stats. Identities = 44/171 (25%), Positives = 70/171 (40%), Gaps = 7/171 (4%) Query: 5 TVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFET-LQSLNYHIETCGQ 62 + +WNVN IRA I N +IK+ N DI C+QETK P E + S + + Sbjct: 66 KIVSWNVNGIRAVIKNNGMEYIKKENADIFCIQETKCPLHKIPSEAKVPSYQSFWSSADK 125 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 Y G A+ SK PI++ + D + R I A + + Y+P+ Sbjct: 126 AGYAGTALFSKISPIKVTYGIGKKMHDDEGRVITAEYD----KFYLVTAYVPNSGQ-GLI 180 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + + ++L+ +P+I GD N+ + D P A Sbjct: 181 RLPYREKEWDPDFLEYLRKLDSTKPVIVCGDLNVAHEEIDLARPETNHKTA 231 >gi|168031629|ref|XP_001768323.1| predicted protein [Physcomitrella patens subsp. patens] gi|162680501|gb|EDQ66937.1| predicted protein [Physcomitrella patens subsp. patens] Length = 369 Score = 92.2 bits (227), Expect = 7e-17, Method: Composition-based stats. Identities = 45/307 (14%), Positives = 87/307 (28%), Gaps = 51/307 (16%) Query: 5 TVATWNVNSIRARIH----NLAAWIKENNPDIICLQETKT-------------------- 40 +WN NS R+ + + ++ +PD+I +QE + Sbjct: 41 KFMSWNTNSFLLRLKTNREEVLSLLRRLDPDVIAIQEVRIPSAGRKGEPRNHGELKDDTN 100 Query: 41 ---EDKNF-----PFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQA 92 EDK L + Y G A+L K+ I DD Sbjct: 101 SAREDKQIMMRALSVSPLSDYGV-WWSLSDSKYGGTALLVKHSCSPISILYSLDDKLKHE 159 Query: 93 RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG 152 + + + + +W R + F + + Sbjct: 160 ADGRVILAEFHSFRLLNTYVPNNSWKDDDNGFARRRAWDARMIEFLKRPHKKPLIWCGDL 219 Query: 153 DYNIIPQPHDCYNPIIWENDACFTL--------------EVRQSFQKLQNMGFTDAIRAT 198 + + + +T E ++ + L D R Sbjct: 220 NVSNEVIDVSHPDFFSNAKLQGYTPPNAEDIGQPGFTLGERQRFAECLSKGDLVDTYRHL 279 Query: 199 HDTHHLYSFWDYYADSWSKNKG--IRIDHIMLSPEATSLLHSARIDTKPRGWTKP--SDH 254 H + + + + K +G +RID+ +LS + L S+ I + SDH Sbjct: 280 HKQQDFDAGFTWSGNPVGKYRGKRMRIDYFLLSRKLLDRLVSSDIHGQGIEQEGFCGSDH 339 Query: 255 TPVIVSL 261 P+ + + Sbjct: 340 CPITMEI 346 >gi|225456791|ref|XP_002277389.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|297733638|emb|CBI14885.3| unnamed protein product [Vitis vinifera] Length = 357 Score = 92.2 bits (227), Expect = 8e-17, Method: Composition-based stats. Identities = 52/309 (16%), Positives = 97/309 (31%), Gaps = 52/309 (16%) Query: 4 VTVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKT------------------- 40 + TWN NS R+ N ++ + +PD+I +QE + Sbjct: 40 LKFLTWNANSFLIRVKNNWPEFTKFVSDLDPDVIAVQEVRMPAAGSKGAPKNHGELKDDT 99 Query: 41 ----EDKNFPFETLQSL---NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR 93 E+K L NY + S L + + D Sbjct: 100 SSSREEKKILMHALSRPPFGNYRVWWSLADSKYAGTALFVKKCFQPKKVSFSIDQKASKH 159 Query: 94 FIEATFTI-NTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG 152 E + ++ R+ N Y+P+ + ++PLI+ G Sbjct: 160 EPEGRVILAEFESFRLLNTYVPNNGWKDEET-SFQRRRKWDKRMLEFVVQSSDKPLIWCG 218 Query: 153 DYNIIPQPHDCYNPIIW---ENDACFTL-------------EVRQSFQKLQNMGFTDAIR 196 D N+ + D +P + +++ E R+ L+ DA R Sbjct: 219 DLNVSHEEIDVSHPEFFSAAKHNGYVPPNKEDCGQPGFTLAERRRFGGILKEGKLVDAYR 278 Query: 197 ATHDTHHLYSFWDYYADSWSKNKG--IRIDHIMLSPEATSLLHSARIDTK--PRGWTKPS 252 H + + + + K +G +RID+ ++ + + I + S Sbjct: 279 LLHKEKDMEGGFSWSGNPIGKYRGKRMRIDYFIVPEALKDRIVACEIHGQGIELKGFYGS 338 Query: 253 DHTPVIVSL 261 DH PV + L Sbjct: 339 DHCPVSLEL 347 >gi|189242136|ref|XP_001815293.1| PREDICTED: similar to ap endonuclease, partial [Tribolium castaneum] Length = 130 Score = 92.2 bits (227), Expect = 8e-17, Method: Composition-based stats. Identities = 34/134 (25%), Positives = 58/134 (43%), Gaps = 5/134 (3%) Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG 190 + L+ ++P+I GD N+ + D NP +A FT+E R G Sbjct: 1 WNEQFEKFIKNLDSQKPVIICGDMNVAHKEIDLANPKTNTKNAGFTVEERDGMTAFLGNG 60 Query: 191 FTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT 249 + D R + Y+FW Y ++ +KN G R+D+ ++S + I + G Sbjct: 61 YVDIYRHLYPEKEKAYTFWTYMGNARAKNVGWRLDYFLVSQRFVDNVCDNIIHSDVLG-- 118 Query: 250 KPSDHTPVIVSLDI 263 SDH P+ + + I Sbjct: 119 --SDHCPLSLHIQI 130 >gi|122934884|gb|ABM68185.1| APEX1 [Lagothrix lagotricha] Length = 156 Score = 91.8 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 6/140 (4%) Query: 126 DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVRQSFQ 184 + R + L +PL+ GD N+ + D NP + +A FT E + + Sbjct: 21 EYRQRWDEAFRKFLKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGE 80 Query: 185 KLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 LQ + D+ R + + Y+FW Y ++ SKN G R+D+ +LS L ++I + Sbjct: 81 LLQAVPLADSFRHLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRS 140 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 K G SDH P+ + L + Sbjct: 141 KALG----SDHCPITLYLAL 156 >gi|122053846|gb|ABM65904.1| APEX1 [Ateles geoffroyi] Length = 159 Score = 91.8 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 6/140 (4%) Query: 126 DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVRQSFQ 184 + R + L +PL+ GD N+ + D NP + +A FT E + + Sbjct: 24 EYRQRWDEAFRKFLKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGE 83 Query: 185 KLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 LQ + D+ R + + Y+FW Y ++ SKN G R+D+ +LS L ++I + Sbjct: 84 LLQAVPLADSFRHLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRS 143 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 K G SDH P+ + L + Sbjct: 144 KALG----SDHCPITLYLAL 159 >gi|121222076|gb|ABM47607.1| APEX1 [Saguinus labiatus] Length = 158 Score = 91.8 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 6/140 (4%) Query: 126 DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVRQSFQ 184 + R + L +PL+ GD N+ + D NP + +A FT E + + Sbjct: 23 EYRQRWDEAFRKFLKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGE 82 Query: 185 KLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 LQ + D+ R + + Y+FW Y ++ SKN G R+D+ +LS L ++I + Sbjct: 83 LLQAVPLADSFRHLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRS 142 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 K G SDH P+ + L + Sbjct: 143 KALG----SDHCPITLYLAL 158 >gi|154291711|ref|XP_001546436.1| hypothetical protein BC1G_15146 [Botryotinia fuckeliana B05.10] gi|150846646|gb|EDN21839.1| hypothetical protein BC1G_15146 [Botryotinia fuckeliana B05.10] Length = 578 Score = 91.8 bits (226), Expect = 1e-16, Method: Composition-based stats. Identities = 40/254 (15%), Positives = 70/254 (27%), Gaps = 30/254 (11%) Query: 31 DIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDV 90 DI +QETK + K+ + + + + K G + ++ Y + Sbjct: 6 DIFLMQETKIQRKDLRDDMVLVPGWDVYFSLPKYKKGYSGVAIYTRNSVC----APIRAE 61 Query: 91 QARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIF 150 + T +T + R G T + D + I Sbjct: 62 EGITGVLTPPNSTTSFRDLPKDQQIGGYPTGAQLQDYFLDAATLDSEGRCVILEFPAFIL 121 Query: 151 AGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ---------------------KLQNM 189 G Y + I +A T + Sbjct: 122 IGVYCPATRDETRDEFRIGFLNALDTRWSNTYQPLLAGYLIISLVGGKVIGDRDEGTEPQ 181 Query: 190 GFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGW 248 D R H +++ WD ++ N G RID+++ S + + I G Sbjct: 182 VMWDISRGFHPTRKGMFTCWDQKMNARPGNFGSRIDYVLCSEDMKDWFQDSNIQEGLMG- 240 Query: 249 TKPSDHTPVIVSLD 262 SDH PV + Sbjct: 241 ---SDHCPVFATFK 251 >gi|323452214|gb|EGB08089.1| hypothetical protein AURANDRAFT_71687 [Aureococcus anophagefferens] Length = 1302 Score = 91.4 bits (225), Expect = 1e-16, Method: Composition-based stats. Identities = 53/320 (16%), Positives = 97/320 (30%), Gaps = 61/320 (19%) Query: 2 SVVTVATWNVNSIRARIH---------NLAAWIKENNPDIICLQETKTEDKNFP--FETL 50 + V + NV +RA + LAA + PD++CL E K +D++ E L Sbjct: 981 KTLKVVSVNVAGLRAVLDEAKGPEKRDALAALVASEAPDVLCLNEHKLKDEDVDEAKEKL 1040 Query: 51 QSL------------------NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQA 92 +L Y + V ++ DD V Sbjct: 1041 AALLPAYSRAEFTCSGPPGKKGYSGVAMLFRDGGAVPADAEVTRGMPGVDAAADDDIVNH 1100 Query: 93 RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG 152 T + + G + Y + R L L+ P+ G Sbjct: 1101 EGRLLTLALPGTLSLVATYVPNSGQDLKRLAYRTEAGGWDRSLAAYVASLKAAGPVAVIG 1160 Query: 153 DYNIIPQPHDCYNPII-------WENDACFTL-----------------EVRQSFQKLQN 188 D N D +N D E + L + Sbjct: 1161 DLNCCHAAADMHNMHARPNFEELNSGDVAIEDQYAGLSAIKKQAGLTVEERVSFTKLLDD 1220 Query: 189 MGFTDAIRATHDT-HHLYSFWDYYADS-WSKNKGIRIDHIMLSPEA-----TSLLHSARI 241 G D+ R H +++++ + N+G+R+D+++ +P+ L + + Sbjct: 1221 AGLVDSFRRQHPAATGVFTYYSQRVVANRPANRGLRLDYVLATPDLLEDGAAPALVDSFV 1280 Query: 242 DTKPRGWTKPSDHTPVIVSL 261 + + +DHTPV + Sbjct: 1281 LSDA-DTPQLADHTPVGATF 1299 >gi|217978346|ref|YP_002362493.1| Exonuclease III-like protein [Methylocella silvestris BL2] gi|217503722|gb|ACK51131.1| Exonuclease III-like protein [Methylocella silvestris BL2] Length = 126 Score = 91.0 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 35/56 (62%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 + +A++N+N++ R+ NL +W+ PD++CLQE K ED+ FP +++ Y Sbjct: 1 MKIASFNINNVNKRLPNLLSWLAAERPDVVCLQELKAEDQAFPLAAIEAAGYRAVW 56 >gi|553182|gb|AAA58373.1| class II AP endonuclease [Homo sapiens] Length = 146 Score = 91.0 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 5/86 (5%) Query: 2 SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN----YH 56 + + + +WNV+ +RA I W+KE PDI+CLQETK + P E + Y Sbjct: 60 ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQYW 119 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTH 82 ++ Y+GV +LS+ P+++ Sbjct: 120 SAPSDKEGYSGVGLLSRQCPLKVSYG 145 >gi|70954382|ref|XP_746240.1| AP endonuclease (DNA-(apurinic or apyrimidinic site) lyase) [Plasmodium chabaudi chabaudi] gi|56526785|emb|CAH87963.1| AP endonuclease (DNA-(apurinic or apyrimidinic site) lyase), putative [Plasmodium chabaudi chabaudi] Length = 350 Score = 91.0 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 52/340 (15%), Positives = 95/340 (27%), Gaps = 87/340 (25%) Query: 6 VATWNVNSIRARIHN------LAAWIKENNPDIICLQETKTEDKNFPF------------ 47 + TWN+NSI R N ++ E N D++C QE + N P Sbjct: 8 IVTWNMNSITVRYKNKDKWKKFIKFVNEINADVLCFQEVRLPALNIPKNEEVKVEDNKTY 67 Query: 48 -------------------------------------ETLQSLN-YHIETCGQKSYNGVA 69 + + N Y + S V Sbjct: 68 GRKKTEKIIDEERDRGSVKNTDQKSLLDYNIVEDILKKDFKEYNAYFSLANIKYSGQLVL 127 Query: 70 ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKIS 129 + + + +L D + + + Y P+ + K++ + Sbjct: 128 VKKTIEVKSVRYNLSFDTNPNIHNDEGRIILLEFSNFYLLSTYSPNNGF-DAPKFERRRL 186 Query: 130 WIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNM 189 + F + + LI+ GD NI P+ D +PI + + Q Sbjct: 187 FDDSMKEFVLFMKKENKNLIWTGDLNIAPEDIDLSHPIEFRKMKKGNVPKEYIGQPGCTD 246 Query: 190 GFTDAIRATHDTHH----------------------------LYSFWDYYADSWSKNKGI 221 + +Y++ + S N+ + Sbjct: 247 AERKNFKTILKNGDLVDSYRYFENYKIKNDPTYKKKTNINDNIYTWRCPFLIGKSCNRAM 306 Query: 222 RIDHIMLSPEATSLLHSARID--TKPRGWTKPSDHTPVIV 259 RIDH ++S + + I + SDH PVI+ Sbjct: 307 RIDHFIVSKSLLDKIENVEIHGYSVSHTNFYGSDHCPVIL 346 >gi|296880619|ref|ZP_06904577.1| exodeoxyribonuclease III [Clostridium difficile NAP07] gi|296428381|gb|EFH14270.1| exodeoxyribonuclease III [Clostridium difficile NAP07] Length = 69 Score = 91.0 bits (224), Expect = 2e-16, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 2/70 (2%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN IRA + KE + D+ CLQETK ++ + L + + Sbjct: 1 MRFISWNVNGIRACAGKGFLDFFKEVDADVFCLQETKLQEGQIELD-LPGYFQYWNYAER 59 Query: 63 KSYNGVAILS 72 K Y+G AI + Sbjct: 60 KGYSGTAIFT 69 >gi|154492028|ref|ZP_02031654.1| hypothetical protein PARMER_01659 [Parabacteroides merdae ATCC 43184] gi|154088269|gb|EDN87314.1| hypothetical protein PARMER_01659 [Parabacteroides merdae ATCC 43184] Length = 299 Score = 90.6 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 40/267 (14%), Positives = 74/267 (27%), Gaps = 10/267 (3%) Query: 4 VTVATWNV-NSI---RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 + V ++N+ N +R N WIK PDI+ + E + + + Sbjct: 30 LRVISYNIWNGFEHDASRRANFIDWIKGQQPDILAITELVGFTEKNLGQLASEYGHKYYA 89 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQA-RFIEATFTINTQTLRIGNLYLPHGNP 118 ++ V I S + + + + + + L Sbjct: 90 IVKEEGYPVGITSNKPITVVKKQVEDFWHGMLHVKTYGLDIIVTHLSPHDWKFRLKEAQM 149 Query: 119 ITSTKYDDKISWIKRFLRFASQ-RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 +T D+++ F + + + A + D Sbjct: 150 LTKYIQDNQLDNCMVMGDFNAYSPFDADWVETHAQLIKNKQKWDAEQETYRNMRDGRLDY 209 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYY---ADSWSKNKGIRIDHIMLSPEATS 234 V F + + + Y D+ R+D+I++SP S Sbjct: 210 SVLSQFLSIGLTDICRLYVPADKRTTFPTAFLYRWQHGDTRLHGISERLDYILVSPSLVS 269 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261 A I SDH PV V L Sbjct: 270 RCVDAHIHNGI-ETEGISDHYPVSVDL 295 >gi|91786127|ref|YP_547079.1| exodeoxyribonuclease III (xth) [Polaromonas sp. JS666] gi|91695352|gb|ABE42181.1| exodeoxyribonuclease III (xth) [Polaromonas sp. JS666] Length = 349 Score = 90.6 bits (223), Expect = 2e-16, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 4/61 (6%) Query: 204 LYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 Y++W +++KN G R+D+ + +P +L S I R SDH P+ V D Sbjct: 292 AYTWWSNRGQAYAKNVGWRLDYHLATPAFAALARSEHIYRAER----FSDHAPITVDYDW 347 Query: 264 P 264 Sbjct: 348 S 348 Score = 88.3 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 46/190 (24%), Positives = 77/190 (40%), Gaps = 9/190 (4%) Query: 1 MSVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFP--FETLQSLNYHI 57 MS+ + + N+N IR+ L WI ++ PD IC+QE K + + FE L L + Sbjct: 1 MSLFKLTSLNLNGIRSATSKGLEDWIAQSLPDCICVQELKAQATDVSGRFEALAGLKGYF 60 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT----QTLRIGNLYL 113 +K Y+GVA+ ++++P +++ + D + R++E F L I + Y Sbjct: 61 HFAEKKGYSGVAVYTRHEPSDVIVGYGSSEFDAEGRYVELRFDRPGRKHAPKLSIISCYF 120 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 P G+ L+ + GD NI Q D N ++ Sbjct: 121 PSGSSGEER--QAAKFRFLAEFYPRLLALKETRDFVLCGDVNIAHQEIDLKNFKGNRKNS 178 Query: 174 CFTLEVRQSF 183 F E R Sbjct: 179 GFLPEERAWM 188 >gi|218507710|ref|ZP_03505588.1| exodeoxyribonuclease III protein [Rhizobium etli Brasil 5] Length = 66 Score = 90.2 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 30/66 (45%), Positives = 43/66 (65%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +AT+NVN I R+ L W+KE+ PD++CLQE KT+D FP + + Y GQ+ Sbjct: 1 MKIATYNVNGINGRLDILLRWLKEDAPDVVCLQELKTDDAKFPRKETERAGYGAVWHGQR 60 Query: 64 SYNGVA 69 S+NGVA Sbjct: 61 SWNGVA 66 >gi|58271540|ref|XP_572926.1| DNA-(apurinic or apyrimidinic site) lyase [Cryptococcus neoformans var. neoformans JEC21] gi|134115276|ref|XP_773936.1| hypothetical protein CNBH3880 [Cryptococcus neoformans var. neoformans B-3501A] gi|50256564|gb|EAL19289.1| hypothetical protein CNBH3880 [Cryptococcus neoformans var. neoformans B-3501A] gi|57229185|gb|AAW45619.1| DNA-(apurinic or apyrimidinic site) lyase, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 654 Score = 90.2 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 46/290 (15%), Positives = 73/290 (25%), Gaps = 50/290 (17%) Query: 18 IHNLAAWIKENNPDIICLQETKTEDKNFPFETL---QSLNYHIETCGQKSYNGVAIL--- 71 N+ + E + I C QE KT + + Y+GV Sbjct: 31 KKNIEGLLDELDAQIFCFQEHKTVRTRLEKSMACPGPYDGFWTFPRSKTGYSGVCTYVDS 90 Query: 72 ---------------------SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR--- 107 S +P G DV ++ Sbjct: 91 RYCVPLKAEEGITGLLLGDRLSTMKPPWTDAERIGSYPDVNDMEWMDELDGTKFDVKKLD 150 Query: 108 ------------IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYN 155 L N S + K++++ ++ GD N Sbjct: 151 MEGRAVVCDFGLFVLFNLYCPNETNSARRPYKMNYLHALQERVQLLQAAGREVMLVGDIN 210 Query: 156 I--IPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA--THDTHHLYSFWDYY 211 I P R G + +++ W+ Sbjct: 211 IVRQPMDSGEGPVRSSAEQHYSHPARRILDDWCAPKGPMIDVVRESWPQRDDMFTCWNQK 270 Query: 212 ADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 D+ S N G RID+++ +P + I K G SDH PV V L Sbjct: 271 LDARSANYGSRIDYVLCTPGLRPWIKGGDILPKVYG----SDHCPVYVDL 316 >gi|281349439|gb|EFB25023.1| hypothetical protein PANDA_005392 [Ailuropoda melanoleuca] Length = 365 Score = 90.2 bits (222), Expect = 3e-16, Method: Composition-based stats. Identities = 50/282 (17%), Positives = 92/282 (32%), Gaps = 34/282 (12%) Query: 2 SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 S +++ + N+N + + I +A WIK ++P I CLQET E K+ ++ + Sbjct: 7 SYLSIISINLNGLNSPIKRHRVADWIKRHDPSICCLQETHFEPKDAFRLRVRGWSTIFHA 66 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 G + GVAIL + + + + I Sbjct: 67 NGPQKKAGVAILISDRLDF--------------KLEAIERDTEGHYIILKGSIQQVDMTI 112 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + ++ + + +++ + GD N D E Sbjct: 113 INIYAPNRGAARYTSQLLTKIKRHIDKNTVIVGDLNTPLSEIDRTPWQKLSK------ES 166 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + L + D R H YSF+ ++S RIDH + S Sbjct: 167 KALNAILDELDLIDIYRTLHPRTKEYSFYSNAHGTFS-----RIDHALGHKTGLSQYQKI 221 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 I SDH + + L+ K ++S + ++ I Sbjct: 222 EIIPCI-----FSDHNALKLELN--HKEKPGRNSNTWRLRTI 256 >gi|310794037|gb|EFQ29498.1| endonuclease/Exonuclease/phosphatase [Glomerella graminicola M1.001] Length = 635 Score = 89.8 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 49/322 (15%), Positives = 94/322 (29%), Gaps = 79/322 (24%) Query: 4 VTVATWNVNSIRARIHNLAAWI--------KENNPDIICLQETKTEDKNFPFETLQSLNY 55 + + TWN W+ + DI+ +QETK + K+ + + + Sbjct: 3 LRITTWN-----------GEWLQYTSEAMFEILEADIVIMQETKIQRKDLRDDMVLVPGW 51 Query: 56 HIET---CGQKSYNGVAILSKYQPIEIVT---------------------------HLPG 85 + +K Y+GVAI ++ + Sbjct: 52 DVFFSLPKHKKGYSGVAIYTRNAKCCPIRAEEGITGILPAPNSSTSFRDLPEAQQIGGYP 111 Query: 86 DDLDVQARFIEATFTINTQTLRIGNLYLPHGN-----PITSTKYDDKISWIKRFLRFASQ 140 + EAT + + + S++ D ++ ++ Sbjct: 112 RPDQLPGEVDEATLDSEGRCVVLEFQAFVLIGTYSPAMRDSSRDDFRLGYLNALDARVRN 171 Query: 141 RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF--------- 191 + + ++ GD N+I + D N ++E + Sbjct: 172 LVAAGKQVVLTGDLNVIREEMDTCNVREALRKEGMSVEEWMGMPSRRLFNHLVFDGRVTG 231 Query: 192 -----------TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 D R H T +++ W+ + N G RID+I+ S + Sbjct: 232 ERDEGREAPVLYDLTRIFHPTRLGMFTCWETKRNMRPANNGSRIDYILCSAGIKDWFTGS 291 Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261 I G SDH PV +L Sbjct: 292 DIQEGLMG----SDHCPVYANL 309 >gi|218677944|ref|ZP_03525841.1| putative exodeoxyribonuclease [Rhizobium etli CIAT 894] Length = 73 Score = 89.8 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 29/68 (42%), Positives = 42/68 (61%) Query: 198 THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257 H +Y+FW Y+ +S+ ++ G+RIDH +LSP L SA + KPR W SDH PV Sbjct: 1 MHPGERVYTFWKYWRNSFERDAGLRIDHFLLSPAVEPWLRSATVRRKPRTWEHTSDHAPV 60 Query: 258 IVSLDIPE 265 ++ LD+ E Sbjct: 61 MIELDVSE 68 >gi|330982163|gb|EGH80266.1| exonuclease III [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 114 Score = 89.8 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 3/103 (2%) Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSK--N 218 D + F E R+ ++L+N G D+ R + L+S++DY + + Sbjct: 11 DNAKRWLKTGKCSFLPEEREWMERLKNWGLVDSFRHLYPEVVDLFSWFDYRSRGFEDEPK 70 Query: 219 KGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +G+RID IM S + A +D R KPSDH P+ + L Sbjct: 71 RGLRIDLIMTSTGLQPRIKEAGVDYDLRAMEKPSDHAPIWLEL 113 >gi|281349888|gb|EFB25472.1| hypothetical protein PANDA_006397 [Ailuropoda melanoleuca] Length = 363 Score = 89.8 bits (221), Expect = 4e-16, Method: Composition-based stats. Identities = 50/282 (17%), Positives = 92/282 (32%), Gaps = 34/282 (12%) Query: 2 SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 S +++ + N+N + + I +A WIK ++P I CLQET E K+ ++ + Sbjct: 5 SYLSIISINLNGLNSPIKRHRVADWIKRHDPSICCLQETHFEPKDAFRLRVRGWSTIFHA 64 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 G + GVAIL + + + + I Sbjct: 65 NGPQKKAGVAILISDRLDF--------------KLEAIERDTEGHYIILKGSIQQVDMTI 110 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + ++ + + +++ + GD N D E Sbjct: 111 INIYAPNRGAARYTSQLLTKIKRHIDKNTVIVGDLNTPLSEIDRTPWQKLSK------ES 164 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + L + D R H YSF+ ++S RIDH + S Sbjct: 165 KALNAILDELDLIDIYRTLHPRTKEYSFYSNAHGTFS-----RIDHALGHKTGLSQYQKI 219 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 I SDH + + L+ K ++S + ++ I Sbjct: 220 EIIPCI-----FSDHNALKLELN--HKEKPGRNSNTWRLRTI 254 >gi|68063675|ref|XP_673834.1| AP endonuclease (DNA-(apurinic or apyrimidinic site) lyase) [Plasmodium berghei strain ANKA] gi|68070845|ref|XP_677336.1| hypothetical protein [Plasmodium berghei strain ANKA] gi|56491972|emb|CAI02361.1| AP endonuclease (DNA-(apurinic or apyrimidinic site) lyase), putative [Plasmodium berghei] gi|56497413|emb|CAH98029.1| hypothetical protein PB000718.02.0 [Plasmodium berghei] Length = 346 Score = 89.5 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 49/336 (14%), Positives = 92/336 (27%), Gaps = 83/336 (24%) Query: 6 VATWNVNSIRARIHN------LAAWIKENNPDIICLQETKTED----------------- 42 + TWN+NSI R N ++ E N D++C QE + Sbjct: 8 IVTWNMNSITVRYKNKEKWKRFMKFVNEINADVLCFQEVRLPALNISKNESKNVNNKVYG 67 Query: 43 ----------------------------KNFPFETLQSL-NYHIETCGQKSYNGVAILSK 73 + + Y + S V + Sbjct: 68 GKKNEGEERNRGSVKNTDQKSLIDYKIVEEILKNDFKEYNGYFSLANIKYSGQLVLVKKS 127 Query: 74 YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKR 133 + + +L + + + + Y P+ TK+ + + + Sbjct: 128 IKVKSVRYNLLFETDPNIHNDEGRIILLEFSNFYLLSTYSPNNGF-DQTKFKRRSLFDNQ 186 Query: 134 FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTD 193 F + LI+ GD NI P+ D +PI + + Q Sbjct: 187 MKEFVLFMKNENKNLIWTGDLNIAPEDVDLSHPIEFRKMKKGNVPKEYIGQPGCTDAERA 246 Query: 194 AIRATHDTHH----------------------------LYSFWDYYADSWSKNKGIRIDH 225 + +Y++ + S N+ +RIDH Sbjct: 247 NFKTILKNGDLIDSYRYFENYKIKNDPTYKRKTNINDNIYTWRCPFLIGKSCNRAMRIDH 306 Query: 226 IMLSPEATSLLHSARID--TKPRGWTKPSDHTPVIV 259 ++S + + + I + SDH PVI+ Sbjct: 307 FIVSKNLLNQIENIEIHGYSVFHTNFYGSDHCPVIL 342 >gi|281339430|gb|EFB15014.1| hypothetical protein PANDA_009103 [Ailuropoda melanoleuca] gi|281343639|gb|EFB19223.1| hypothetical protein PANDA_010445 [Ailuropoda melanoleuca] gi|281345510|gb|EFB21094.1| hypothetical protein PANDA_020869 [Ailuropoda melanoleuca] gi|281345784|gb|EFB21368.1| hypothetical protein PANDA_017605 [Ailuropoda melanoleuca] gi|281348177|gb|EFB23761.1| hypothetical protein PANDA_019415 [Ailuropoda melanoleuca] gi|281354576|gb|EFB30160.1| hypothetical protein PANDA_018241 [Ailuropoda melanoleuca] Length = 359 Score = 89.5 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 50/282 (17%), Positives = 92/282 (32%), Gaps = 34/282 (12%) Query: 2 SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 S +++ + N+N + + I +A WIK ++P I CLQET E K+ ++ + Sbjct: 1 SYLSIISINLNGLNSPIKRHRVADWIKRHDPSICCLQETHFEPKDAFRLRVRGWSTIFHA 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 G + GVAIL + + + + I Sbjct: 61 NGPQKKAGVAILISDRLDF--------------KLEAIERDTEGHYIILKGSIQQVDMTI 106 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + ++ + + +++ + GD N D E Sbjct: 107 INIYAPNRGAARYTSQLLTKIKRHIDKNTVIVGDLNTPLSEIDRTPWQKLSK------ES 160 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + L + D R H YSF+ ++S RIDH + S Sbjct: 161 KALNAILDELDLIDIYRTLHPRTKEYSFYSNAHGTFS-----RIDHALGHKTGLSQYQKI 215 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 I SDH + + L+ K ++S + ++ I Sbjct: 216 EIIPCI-----FSDHNALKLELN--HKEKPGRNSNTWRLRTI 250 >gi|281346330|gb|EFB21914.1| hypothetical protein PANDA_012384 [Ailuropoda melanoleuca] Length = 359 Score = 89.5 bits (220), Expect = 5e-16, Method: Composition-based stats. Identities = 50/282 (17%), Positives = 92/282 (32%), Gaps = 34/282 (12%) Query: 2 SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 S +++ + N+N + + I +A WIK ++P I CLQET E K+ ++ + Sbjct: 1 SYLSIISINLNGLNSPIKRHRVADWIKRHDPSICCLQETHFEPKDAFRLRVRGWSTIFHA 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 G + GVAIL + + + + I Sbjct: 61 NGPQKKAGVAILISDRLDF--------------KLEAIERDTEGHYIILKGSIQQVDMTI 106 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + ++ + + +++ + GD N D E Sbjct: 107 INIYAPNRGAARYTSQLLTKIKRHIDKNTVIVGDLNTPLSEIDRTPWQKLSK------ES 160 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + L + D R H YSF+ ++S RIDH + S Sbjct: 161 KALNAILDELDLIDIYRTLHPRTKEYSFYSNAHGTFS-----RIDHALGHKTGLSQYQKI 215 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 I SDH + + L+ K ++S + ++ I Sbjct: 216 EIIPCI-----FSDHNALKLELN--HKEKPGRNSNTWRLRTI 250 >gi|302830584|ref|XP_002946858.1| hypothetical protein VOLCADRAFT_56112 [Volvox carteri f. nagariensis] gi|300267902|gb|EFJ52084.1| hypothetical protein VOLCADRAFT_56112 [Volvox carteri f. nagariensis] Length = 355 Score = 89.1 bits (219), Expect = 7e-16, Method: Composition-based stats. Identities = 45/258 (17%), Positives = 96/258 (37%), Gaps = 26/258 (10%) Query: 3 VVTVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTE-------DKNFPFETLQ 51 ++ + +WNV +RA + + + + ++CLQE K + + + Sbjct: 12 LLNILSWNVAGLRALVKKHPGLIPSLVWREGARVLCLQEHKLQGSHTGEMEAALGLQAGH 71 Query: 52 SLNY--HIETCGQKSYNGVAILSKYQPIEIVTH----LPGDDLDVQARFIEATFTINTQT 105 + + G+ Y+GV++ + +P+ + ++ + + Sbjct: 72 DRGRAGWVCSTGKLGYSGVSVHTASRPLSVTVGLGAGGGSTSSPDSDPDPDSEHEVEGRV 131 Query: 106 LRIG-------NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP 158 + + N+Y+P+ W F ++ +P+I GD N Sbjct: 132 VTVELEEAFVVNVYVPNSGEGLKRLDYRINRWDGAFAKYVKGLESRGKPVIVTGDLNCAH 191 Query: 159 QPHDCYNPIIWENDACFTLEVRQSFQKL--QNMGFTDAIRATHDTHHLYSFWDYYADSWS 216 + D + P A FT+E R+SF +L +G D R Y+++ + Sbjct: 192 KEIDIHAPKTNLRSAGFTVEERESFGRLLLGEVGLVDTFRELFPCTVAYTYFTRRFNCRE 251 Query: 217 KNKGIRIDHIMLSPEATS 234 +NKG R+D+ + S Sbjct: 252 QNKGWRLDYFLTSRALMP 269 >gi|281347251|gb|EFB22835.1| hypothetical protein PANDA_019649 [Ailuropoda melanoleuca] Length = 340 Score = 88.7 bits (218), Expect = 7e-16, Method: Composition-based stats. Identities = 50/282 (17%), Positives = 92/282 (32%), Gaps = 34/282 (12%) Query: 2 SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 S +++ + N+N + + I +A WIK ++P I CLQET E K+ ++ + Sbjct: 1 SYLSIISINLNGLNSPIKRHRVADWIKRHDPSICCLQETHFEPKDAFRLRVRGWSTIFHA 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 G + GVAIL + + + + I Sbjct: 61 NGPQKKAGVAILISDRLDF--------------KLEAIERDTEGHYIILKGSIQQVDMTI 106 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + ++ + + +++ + GD N D E Sbjct: 107 INIYAPNRGAARYTSQLLTKIKRHIDKNTVIVGDLNTPLSEIDRTPWQKLSK------ES 160 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + L + D R H YSF+ ++S RIDH + S Sbjct: 161 KALNAILDELDLIDIYRTLHPRTKEYSFYSNAHGTFS-----RIDHALGHKTGLSQYQKI 215 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 I SDH + + L+ K ++S + ++ I Sbjct: 216 EIIPCI-----FSDHNALKLELN--HKEKPGRNSNTWRLRTI 250 >gi|281346276|gb|EFB21860.1| hypothetical protein PANDA_020863 [Ailuropoda melanoleuca] Length = 363 Score = 88.7 bits (218), Expect = 8e-16, Method: Composition-based stats. Identities = 52/282 (18%), Positives = 91/282 (32%), Gaps = 34/282 (12%) Query: 2 SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 S +++ T N N + A I +A WIK ++P I CLQET E K+ ++ + Sbjct: 5 SYLSIITLNGNGLNAPIKRHRVADWIKRHDPSICCLQETHFEPKDAFRLRVRGWSTIFHA 64 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 G + GVAIL + + + + I Sbjct: 65 NGPQKKAGVAILISDRLDF--------------KLEAIERDTEGHYIILKGSIQQVDMTI 110 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + ++ + + +++ + GD N D E Sbjct: 111 INIYAPNRGAARYTSQLLTKIKRHIDKNTVIVGDLNTPLSEIDRTPWQKLSK------ES 164 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + L + D R H YSF+ ++S RIDH + S Sbjct: 165 KALNAILDELDLIDIYRTLHPRTKEYSFYSNAHGTFS-----RIDHALGHKTGLSQYQKI 219 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 I SDH + + L+ K ++S + ++ I Sbjct: 220 EIIPCI-----FSDHNALKLELN--HKEKPGRNSNTWRLRTI 254 >gi|321262100|ref|XP_003195769.1| DNA-(apurinic or apyrimidinic site) lyase [Cryptococcus gattii WM276] gi|317462243|gb|ADV23982.1| DNA-(apurinic or apyrimidinic site) lyase, putative [Cryptococcus gattii WM276] Length = 651 Score = 88.7 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 45/290 (15%), Positives = 72/290 (24%), Gaps = 50/290 (17%) Query: 18 IHNLAAWIKENNPDIICLQETKTEDKNFPFETL---QSLNYHIETCGQKSYNGVAIL--- 71 N+ + E + IIC QE KT + + Y+GV Sbjct: 3 KKNIEGLLDELDAQIICFQEHKTVRTRLEKSMACPGPYDGFWTFPRSKTGYSGVCTYVDS 62 Query: 72 ---------------------SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR--- 107 S +P G V ++ Sbjct: 63 RYCVPLKAEEGITGLLLGDRLSTMKPPWTDVERIGSYPVVDDMDWMDELDGTKFDVKKLD 122 Query: 108 ------------IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYN 155 L N + K++++ +I GD N Sbjct: 123 MEGRAVVCDFGLFVLFNLYCPNETNDARRPYKMNYLHALQERVHLLQAAGREVIIVGDIN 182 Query: 156 I--IPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA--THDTHHLYSFWDYY 211 I P R G + +++ W+ Sbjct: 183 IVRQPMDSGEGPVRSSAEQHYSHPARRILDNWCAPKGPMVDVIRESWPQRDDMFTCWNQK 242 Query: 212 ADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 D+ S N G RID+++ + + I +K G SDH PV V L Sbjct: 243 LDARSANYGSRIDYVLCTHGLRPWIKGGDILSKVYG----SDHCPVYVDL 288 >gi|281340347|gb|EFB15931.1| hypothetical protein PANDA_015345 [Ailuropoda melanoleuca] Length = 340 Score = 88.7 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 50/282 (17%), Positives = 92/282 (32%), Gaps = 34/282 (12%) Query: 2 SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 S +++ + N+N + + I +A WIK ++P I CLQET E K+ ++ + Sbjct: 1 SYLSIISINLNGLNSPIKRHRVADWIKRHDPSICCLQETHFEPKDAFRLRVRGWSTIFHA 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 G + GVAIL + + + + I Sbjct: 61 NGPQKKAGVAILISDRLDF--------------KLEAIERDTEGHYIILKGSIQQVDMTI 106 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + ++ + + +++ + GD N D E Sbjct: 107 INIYAPNRGAARYTSQLLTKIKRHIDKNTVIVGDLNTPLSEIDRTPWQKLSK------ES 160 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + L + D R H YSF+ ++S RIDH + S Sbjct: 161 KALNAILDELDLIDIYRTLHPRTKEYSFYSNAHGTFS-----RIDHALGHKTGLSQYQKI 215 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 I SDH + + L+ K ++S + ++ I Sbjct: 216 EIIPCI-----FSDHNALKLELN--HKEKPGRNSNTWRLRTI 250 >gi|281340587|gb|EFB16171.1| hypothetical protein PANDA_021425 [Ailuropoda melanoleuca] Length = 348 Score = 88.7 bits (218), Expect = 9e-16, Method: Composition-based stats. Identities = 50/282 (17%), Positives = 92/282 (32%), Gaps = 34/282 (12%) Query: 2 SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 S +++ + N+N + + I +A WIK ++P I CLQET E K+ ++ + Sbjct: 1 SYLSIISINLNGLNSPIKRHRVADWIKRHDPSICCLQETHFEPKDAFRLRVRGWSTIFHA 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 G + GVAIL + + + + I Sbjct: 61 NGPQKKAGVAILISDRLDF--------------KLEAIERDTEGHYIILKGSIQQVDMTI 106 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + ++ + + +++ + GD N D E Sbjct: 107 INIYAPNRGAARYTSQLLTKIKRHIDKNTVIVGDLNTPLSEIDRTPWQKLSK------ES 160 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + L + D R H YSF+ ++S RIDH + S Sbjct: 161 KALNAILDELDLIDIYRTLHPRTKEYSFYSNAHGTFS-----RIDHALGHKTGLSQYQKI 215 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 I SDH + + L+ K ++S + ++ I Sbjct: 216 EIIPCI-----FSDHNALKLELN--HKEKPGRNSNTWRLRTI 250 >gi|281339895|gb|EFB15479.1| hypothetical protein PANDA_018041 [Ailuropoda melanoleuca] Length = 359 Score = 88.3 bits (217), Expect = 1e-15, Method: Composition-based stats. Identities = 50/282 (17%), Positives = 92/282 (32%), Gaps = 34/282 (12%) Query: 2 SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 S +++ + N+N + + I +A WIK ++P I CLQET E K+ ++ + Sbjct: 1 SYLSIISINLNGLNSPIKRHRVADWIKRHDPSICCLQETHFEPKDAFRLRVRGWSTIFHA 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 G + GVAIL + + + + I Sbjct: 61 NGPQKKAGVAILISDRLDF--------------KLEAIERDTEGHYIILKGSIQQVDMTI 106 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + ++ + + +++ + GD N D E Sbjct: 107 INIYAPNRGAARYTSQLLTKIKRHIDKNTVIVGDLNTPLSEIDRTPWQKLSK------ES 160 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + L + D R H YSF+ ++S RIDH + S Sbjct: 161 KALNAILDELDLIDIYRTLHPRTKEYSFYSNAHGTFS-----RIDHALGHKTGLSQYQKI 215 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 I SDH + + L+ K ++S + ++ I Sbjct: 216 EIIPCI-----FSDHNALKLELN--HKEKPGRNSNTWRLRTI 250 >gi|281344302|gb|EFB19886.1| hypothetical protein PANDA_019413 [Ailuropoda melanoleuca] Length = 338 Score = 87.5 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 50/282 (17%), Positives = 92/282 (32%), Gaps = 34/282 (12%) Query: 2 SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 S +++ + N+N + + I +A WIK ++P I CLQET E K+ ++ + Sbjct: 1 SYLSIISINLNGLNSPIKRHRVADWIKRHDPSICCLQETHFEPKDAFRLRVRGWSTIFHA 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 G + GVAIL + + + + I Sbjct: 61 NGPQKKAGVAILISDRLDF--------------KLEAIERDTEGHYIILKGSIQQVDMTI 106 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + ++ + + +++ + GD N D E Sbjct: 107 INIYAPNRGAARYTSQLLTKIKRHIDKNTVIVGDLNTPLSEIDRTPWQKLSK------ES 160 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + L + D R H YSF+ ++S RIDH + S Sbjct: 161 KALNAILDELDLIDIYRTLHPRTKEYSFYSNAHGTFS-----RIDHALGHKTGLSQYQKI 215 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 I SDH + + L+ K ++S + ++ I Sbjct: 216 EIIPCI-----FSDHNALKLELN--HKEKPGRNSNTWRLRTI 250 >gi|311744927|ref|ZP_07718712.1| endonuclease/exonuclease/phosphatase family protein [Algoriphagus sp. PR1] gi|126577434|gb|EAZ81654.1| endonuclease/exonuclease/phosphatase family protein [Algoriphagus sp. PR1] Length = 301 Score = 87.5 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 44/277 (15%), Positives = 81/277 (29%), Gaps = 25/277 (9%) Query: 4 VTVATWNV-NSI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57 + V T+N+ N AR NL W+K NPD++ LQE D + + + Sbjct: 31 LKVMTYNIWNGFDWGKDSARQENLIQWVKTQNPDVLALQELCAYDVDKLKKDAAKWGHPY 90 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 ++ A+ SK I ++ + + +L + Sbjct: 91 VQILKEKGYPTALTSKKPINLIEKNVDNFWHGLLHV------QTFGIDFYVVHLSPSDAD 144 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF-- 175 K ++ + F + Sbjct: 145 TRLREAQQIKTRIQEQASDQYIILGDFNSYSPFDAYWLESKSDLRTKMSEEKNEKYSNLR 204 Query: 176 -TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF--------WDYYADSWSKNKGIRIDHI 226 + ++ D D+ Y+F +D A+S +N+ +RID+I Sbjct: 205 LGEFDYAPMSEFLSIPAIDVSLGKVDSEESYTFPTPALVGLYDQTAESILENR-VRIDYI 263 Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + SP I + SDH P++ I Sbjct: 264 LASPTLAQACSQVEIFNQGI-PETLSDHYPMMAVFQI 299 >gi|221481831|gb|EEE20201.1| ap endonuclease, putative [Toxoplasma gondii GT1] Length = 630 Score = 87.5 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 58/339 (17%), Positives = 95/339 (28%), Gaps = 80/339 (23%) Query: 4 VTVATWNVNSIRARIHN------LAAWIKENNPDIICLQETKTEDKNFP----------- 46 +++ TWNVNSI ARI + + ++++ +PDI+CLQE K P Sbjct: 201 LSIVTWNVNSIAARIRDSRQWFYFSRFLQKIDPDILCLQEVKLAAHGPPGAKRGDGMPRD 260 Query: 47 ---------------FETLQSLN--------------YHIETCGQKSYNGVAILSKYQPI 77 E ++L+ + V + S + Sbjct: 261 HGRIKDSDKVSSVEARELREALHTLLPNHSLLISLADWRYSGQMMFIRKDVQVCSLRYNL 320 Query: 78 EIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL-----YLPHGNPITSTKYDDKISWIK 132 + + + T N Sbjct: 321 SLDGCPAHEHDFEGRVILAEFEAFCVLTTYSPNNGATPKSFERRRLWDERMLQFVTQCSS 380 Query: 133 RFLRFASQRLELEEPLIFAGDYNIIPQPH----------------DCYNPIIWENDACFT 176 L++PL++ GD N P+ D A T Sbjct: 381 SPHCEGLPVQLLKKPLVWVGDLNCAPEDIDLSDPDQFRSVIHETADGTIDPDNIGQAGCT 440 Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDTHHL-------YSFWDYYADSWS---KNKGIRIDH 225 E R+ L+ DA R H YS+ + + G+R+DH Sbjct: 441 DAERRRFRAILERGNLVDAFRELHPRTEPPPLESAEYSWRGFGGSGSRGLLRGLGMRLDH 500 Query: 226 IMLSPEATSLLHSARIDTKPRGWTKP--SDHTPVIVSLD 262 I+L+ + RI + SDH PV+V Sbjct: 501 IVLTETLMPAVELVRICGAGKSKANFFGSDHCPVLVRFK 539 >gi|124504779|ref|XP_001351132.1| AP endonuclease (DNA-[apurinic or apyrimidinic site] lyase), putative [Plasmodium falciparum 3D7] gi|15375379|emb|CAB39006.2| AP endonuclease (DNA-[apurinic or apyrimidinic site] lyase), putative [Plasmodium falciparum 3D7] Length = 617 Score = 87.5 bits (215), Expect = 2e-15, Method: Composition-based stats. Identities = 50/336 (14%), Positives = 91/336 (27%), Gaps = 79/336 (23%) Query: 6 VATWNVNSIRARIHN------LAAWIKENNPDIICLQETKTED----------------- 42 + TWN+NSI R N + N D++C QE + Sbjct: 280 IVTWNMNSITVRYKNKKKWDEFMNFFNNLNADVLCFQEVRLPAMNLSEPCDNKNKNKNKN 339 Query: 43 -----------------------KNFPFETLQSLN-YHIETCGQKSYNGVAILSKYQPIE 78 + + + N Y + S V + Sbjct: 340 DGIRDRGKIKNSDQKSLADYEIMEQILNDDFKDYNAYFSLANIKYSGQLVLVKKNIHIES 399 Query: 79 IVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFA 138 I +L ++ + + + Y P+ ++ + Sbjct: 400 IRYNLFFENNAHIHHDEGRVILVEFSNFFLLSTYTPNNGFDHVKFERRRLFDEQLQKFVT 459 Query: 139 SQRLELEEPLIFAGDYNIIPQPHD--CYNPIIWENDACFTLEVRQSFQKL---------- 186 R E ++PL++ GD NI P+ D E Sbjct: 460 ILRNEKQKPLVWTGDLNIAPEDIDLSHPAEFRRMKKGNVPKEFIGQPGCTDFERKNFQKI 519 Query: 187 ------------------QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 + + ++Y++ + S NK +RIDH ++ Sbjct: 520 LTAGNLVDSYRYLQNIKLNEDKKNNIKHTPNINDNIYTWRCPFLLGKSCNKAMRIDHFIV 579 Query: 229 SPEATSLLHSARID--TKPRGWTKPSDHTPVIVSLD 262 S E + ++ I + SDH PVI+ L Sbjct: 580 SKEFLNRINKIHIQGFSVFHNNFYGSDHCPVILYLK 615 >gi|2072967|gb|AAC51273.1| putative p150 [Homo sapiens] Length = 1275 Score = 87.2 bits (214), Expect = 2e-15, Method: Composition-based stats. Identities = 63/279 (22%), Positives = 104/279 (37%), Gaps = 34/279 (12%) Query: 2 SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 S +T+ T N+N + + I LA+WIK +P + C+QET ++ ++ + Sbjct: 6 SHITILTLNINGLNSAIKRHRLASWIKSQDPSVCCIQETHLMCRDTHRLKIKGWRKIYQA 65 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 G++ GVAIL + T D + +I +I + L I N+Y P+ Sbjct: 66 NGKQKKAGVAILVSDKTDFKPT---KIKRDKEGHYIMVKGSIQQEELTILNIYAPNTGAP 122 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K D + + +L+ + GD+N D D Sbjct: 123 RFIKQD-----------LSDLQRDLDSHTLIMGDFNTPLSTLDRSTRQKVNKDT------ 165 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 ++ L D R H Y+F+ ++SK IDHI+ S S Sbjct: 166 QELNSALHQADLIDIYRTLHPKSTEYTFFSAPHHTYSK-----IDHILGSKALLSKCKRT 220 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278 I T SDH+ + + L I Q ST+ + Sbjct: 221 EIITNYL-----SDHSAIKLELRI--KNLTQSRSTTWKL 252 >gi|2072961|gb|AAC51269.1| putative p150 [Homo sapiens] Length = 1275 Score = 86.8 bits (213), Expect = 3e-15, Method: Composition-based stats. Identities = 62/279 (22%), Positives = 104/279 (37%), Gaps = 34/279 (12%) Query: 2 SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 S +T+ T N+N + + I LA+WIK +P + C+QET ++ ++ + Sbjct: 6 SHITILTLNINGLNSAIKRHRLASWIKSQDPSVCCIQETHLTCRDTHRLKIKGWRKIYQA 65 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 G++ GVAIL + T D + +I +I + L I N+Y P+ Sbjct: 66 NGKQKKAGVAILVSDKTDFKPT---KIKRDKEGHYIMVKGSIQQEELTILNIYAPNTGAP 122 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K + + +L+ + GD+N D D Sbjct: 123 RFIKQ-----------VLSDLQRDLDSHTLIMGDFNTPLSTLDRSTRQKVNKDT------ 165 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 ++ L D R H Y+F+ ++SK IDHI+ S S Sbjct: 166 QELNSALHQADLIDIYRTLHPKSTEYTFFSAPHHTYSK-----IDHILGSKALLSKCKRT 220 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278 +I T SDH+ + + L I Q ST+ + Sbjct: 221 QIITNYL-----SDHSAIKLELRI--KNLTQSRSTTWKL 252 >gi|237843341|ref|XP_002370968.1| DNA-(apurinic or apyrimidinic site) lyase, putative [Toxoplasma gondii ME49] gi|211968632|gb|EEB03828.1| DNA-(apurinic or apyrimidinic site) lyase, putative [Toxoplasma gondii ME49] gi|221502330|gb|EEE28063.1| ap endonuclease, putative [Toxoplasma gondii VEG] Length = 630 Score = 86.8 bits (213), Expect = 4e-15, Method: Composition-based stats. Identities = 58/336 (17%), Positives = 95/336 (28%), Gaps = 80/336 (23%) Query: 4 VTVATWNVNSIRARIHN------LAAWIKENNPDIICLQETKTEDKNFP----------- 46 +++ TWNVNSI ARI + + ++++ +PDI+CLQE K P Sbjct: 201 LSIVTWNVNSIAARIRDSRQWFYFSRFLQKIDPDILCLQEVKLAAHGPPGAKRGDGMPRD 260 Query: 47 ---------------FETLQSLN--------------YHIETCGQKSYNGVAILSKYQPI 77 E ++L+ + V + S + Sbjct: 261 HGRIKDSDKVSSVEARELREALHTLLPNHSLLISLADWRYSGQMMFIRKDVQVCSLRYNL 320 Query: 78 EIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL-----YLPHGNPITSTKYDDKISWIK 132 + + + T N Sbjct: 321 SLDGCPAHEHDFEGRVILAEFEAFCVLTTYSPNNGATPKSFERRRLWDERMLQFVTQCSS 380 Query: 133 RFLRFASQRLELEEPLIFAGDYNIIPQPH----------------DCYNPIIWENDACFT 176 L++PL++ GD N P+ D A T Sbjct: 381 SPHCEGLPVQLLKKPLVWVGDLNCAPEDIDLSDPDQFRSVIHETADGTIDPDNIGQAGCT 440 Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDTHHL-------YSFWDYYADSWS---KNKGIRIDH 225 E R+ L+ DA R H YS+ + + G+R+DH Sbjct: 441 DAERRRFRAILERGNLVDAFRELHPRTEPPPLESAEYSWRGFGGSGSRGLLRGLGMRLDH 500 Query: 226 IMLSPEATSLLHSARIDTKPRGWTKP--SDHTPVIV 259 I+L+ + RI + SDH PV+V Sbjct: 501 IVLTETLMPAVELVRICGAGKSKANFFGSDHCPVLV 536 >gi|242215539|ref|XP_002473584.1| predicted protein [Postia placenta Mad-698-R] gi|220727304|gb|EED81227.1| predicted protein [Postia placenta Mad-698-R] Length = 475 Score = 86.4 bits (212), Expect = 4e-15, Method: Composition-based stats. Identities = 39/275 (14%), Positives = 67/275 (24%), Gaps = 47/275 (17%) Query: 30 PDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAIL------------------ 71 DIIC QE K+ P + YH + G + + Sbjct: 16 ADIICFQEMKSSRATLPRDVALPGPYHGFFSFPVNKGGYSGVAVYADSRKATPLRAEEGL 75 Query: 72 -----------------------SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108 + P D + I Sbjct: 76 TGVLQPKPPMSPEERVSMSYPLAHDFDPFPDDNGETDSGFDALDSEGRTLVVDFGLFVLI 135 Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168 + + ++ +R ++ E ++ + P H N Sbjct: 136 NVYCPAETSDARLPFKMNFHLLLQERIRKLIEKEHREVIVVGDINIAATPLDHAEGNLPS 195 Query: 169 WENDACFTLEVRQSFQKL-QNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHI 226 L N D IR LY+ W+ + N G RID++ Sbjct: 196 SIATFWDHPAREWFRNWLDPNGPMVDVIRMFWPERKGLYTCWNMKLQARETNYGARIDYV 255 Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +++ + I K SDH P+ + L Sbjct: 256 LVTKGLLPWIKHGDIQ----ASLKGSDHCPIYIDL 286 >gi|106322|pir||B34087 hypothetical protein (L1H 3' region) - human Length = 1280 Score = 86.0 bits (211), Expect = 5e-15, Method: Composition-based stats. Identities = 65/279 (23%), Positives = 103/279 (36%), Gaps = 34/279 (12%) Query: 2 SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 S +T+ T NVN + A I LA WIK +P + C+QET ++ ++ + Sbjct: 11 SHITILTLNVNGLNAPIKRHRLANWIKSQDPSVCCIQETHLMCRDTHRLKIKGWRKIYQA 70 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 G++ GVAIL + T D + +I +I + L I N+Y P+ Sbjct: 71 NGKQKKAGVAILVSDKTDFKPT---KIKRDKEGHYIMVKGSIQQEELTILNIYAPNTGAP 127 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K + + +L+ I GD+N D D Sbjct: 128 RFIKQ-----------VLSDLQRDLDSHTIIMGDFNTPLSTLDRSTRQKVNKDI------ 170 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 ++ L D R H Y+F+ ++SK IDHI+ S S Sbjct: 171 QELNSALHQADLIDIYRTLHPKSTEYTFFSAPHHTYSK-----IDHILGSKALLSKCKRT 225 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278 I T SDH+ + + L I + Q ST+ + Sbjct: 226 EIITNCL-----SDHSAIKLELRI--KKLTQNHSTTWKL 257 >gi|2072972|gb|AAC51276.1| putative p150 [Homo sapiens] Length = 1275 Score = 86.0 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 62/279 (22%), Positives = 103/279 (36%), Gaps = 34/279 (12%) Query: 2 SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 S +T+ T N+N + + I LA+WIK +P + C+QET ++ ++ + Sbjct: 6 SHITIVTLNINGLNSAIKRHRLASWIKSQDPSVCCIQETHLTCRDTHRLKIKGWRKIYQA 65 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 G++ GVAIL + T D + +I +I + L I N+Y P+ Sbjct: 66 NGKQKKAGVAILVSDKTDFKPT---KIKRDKEGHYIMVKGSIQQEELTILNIYAPNTGAP 122 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K + + +L+ + GD+N D D Sbjct: 123 RFIKQ-----------VLSDLQRDLDSHTLIMGDFNTPLSTLDRSTRQKVNKDT------ 165 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 ++ L D R H Y+F+ ++SK IDHI+ S S Sbjct: 166 QELNSALHQADLIDIYRTLHPKSTEYTFFSAPHHTYSK-----IDHIVGSKALLSKCKRT 220 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278 I T SDH+ + + L I Q ST+ + Sbjct: 221 EIITNYL-----SDHSAIKLELRIKNLS--QSRSTTWKL 252 >gi|49259594|pdb|1VYB|A Chain A, Endonuclease Domain Of Human Line1 Orf2p gi|49259595|pdb|1VYB|B Chain B, Endonuclease Domain Of Human Line1 Orf2p Length = 238 Score = 86.0 bits (211), Expect = 6e-15, Method: Composition-based stats. Identities = 58/262 (22%), Positives = 97/262 (37%), Gaps = 32/262 (12%) Query: 2 SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 S +T+ T N+N + + I LA+WIK +P + C+QET ++ ++ + Sbjct: 6 SHITILTLNINGLNSAIKRHRLASWIKSQDPSVCCIQETHLTCRDTHRLKIKGWRKIYQA 65 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 G++ GVAIL + T D + +I +I + L I N+Y P+ Sbjct: 66 NGKQKKAGVAILVSDKTDFKPT---KIKRDKEGHYIMVKGSIQQEELTILNIYAPNTGAP 122 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K + + +L+ + GD+N D D Sbjct: 123 RFIKQ-----------VLSDLQRDLDSHTLIMGDFNTPLSTLDRSTRQKVNKDT------ 165 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 ++ L D R H Y+F+ ++SK IDHI+ S S Sbjct: 166 QELNSALHQADLIDIYRTLHPKSTEYTFFSAPHHTYSK-----IDHIVGSKALLSKCKRT 220 Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261 I T SDH+ + + L Sbjct: 221 EIITNYL-----SDHSAIKLEL 237 >gi|5052951|gb|AAD38785.1|AF149422_2 unknown [Homo sapiens] Length = 1275 Score = 85.6 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 62/279 (22%), Positives = 103/279 (36%), Gaps = 34/279 (12%) Query: 2 SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 S +T+ T N+N + + I LA+WIK +P + C+QET ++ ++ + Sbjct: 6 SHITILTLNINGLNSAIKRHRLASWIKSQDPSVCCIQETHLTCRDTHRLKIKGWRKIYQA 65 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 G++ GVAIL + T D + +I +I + L I N+Y P+ Sbjct: 66 NGKQKKAGVAILVSDKTDFKPT---KIKRDKEGHYIMVKGSIQQEELTILNIYAPNTGAP 122 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K + + +L+ + GD+N D D Sbjct: 123 RFIKQ-----------VLSELQRDLDSHTLIMGDFNTPLSTLDRSTRQKVNKDT------ 165 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 ++ L D R H Y+F+ ++SK IDHI+ S S Sbjct: 166 QELNSALHQADLIDIYRTLHPKSTEYTFFSAPHHTYSK-----IDHIVGSKALLSKCKRT 220 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278 I T SDH+ + + L I Q ST+ + Sbjct: 221 EIITNYL-----SDHSAIKLELRI--KNLTQSRSTTWKL 252 >gi|281349008|gb|EFB24592.1| hypothetical protein PANDA_021886 [Ailuropoda melanoleuca] gi|281354349|gb|EFB29933.1| hypothetical protein PANDA_010613 [Ailuropoda melanoleuca] Length = 354 Score = 85.6 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 49/277 (17%), Positives = 88/277 (31%), Gaps = 34/277 (12%) Query: 7 ATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64 + N+N + + I +A WIK ++P I CLQET E K+ ++ + G + Sbjct: 1 ISINLNGLNSPIKRHRVADWIKRHDPSICCLQETHFEPKDAFRLRVRGWSTIFHANGPQK 60 Query: 65 YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124 GVAIL + + + + I + Sbjct: 61 KAGVAILISDRLDF--------------KLEAIERDTEGHYIILKGSIQQVDMTIINIYA 106 Query: 125 DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ 184 ++ + + +++ + GD N D E + Sbjct: 107 PNRGAARYTSQLLTKIKRHIDKNTVIVGDLNTPLSEIDRTPWQKLSK------ESKALNA 160 Query: 185 KLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK 244 L + D R H YSF+ ++S RIDH + S I Sbjct: 161 ILDELDLIDIYRTLHPRTKEYSFYSNAHGTFS-----RIDHALGHKTGLSQYQKIEIIPC 215 Query: 245 PRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 SDH + + L+ K ++S + ++ I Sbjct: 216 I-----FSDHNALKLELN--HKEKPGRNSNTWRLRTI 245 >gi|2072958|gb|AAC51267.1| putative p150 [Homo sapiens] Length = 1275 Score = 85.6 bits (210), Expect = 7e-15, Method: Composition-based stats. Identities = 61/279 (21%), Positives = 102/279 (36%), Gaps = 34/279 (12%) Query: 2 SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 S +T+ T N+N + + I LA+WIK +P + C+QET ++ ++ + Sbjct: 6 SHITILTLNINGLNSAIKRHRLASWIKSQDPSVCCIQETHLTCRDTHRLKIKGWRKIYQA 65 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 G++ GVAIL + T D + +I +I + L I N+Y P+ Sbjct: 66 NGKQKKAGVAILVSDKTDFKPT---KIKRDKEGHYIMVKGSIQQEELTILNIYAPNTGAP 122 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K + + +L+ + GD+N D Sbjct: 123 RFIKQ-----------VLSDLQRDLDSHTLIMGDFNTPLSTLHRSTRQKVNKDT------ 165 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 ++ L D R H Y+F+ ++SK IDHI+ S S Sbjct: 166 QELNSALYQADLIDIYRTLHPKSTEYTFFSAPHHTYSK-----IDHIVGSKALLSKCKRT 220 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278 I T SDH+ + + L I Q ST+ + Sbjct: 221 EIITNYL-----SDHSAIKLELRI--KNLTQSRSTTWKL 252 >gi|2072951|gb|AAC51263.1| putative p150 [Homo sapiens] Length = 1275 Score = 85.6 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 62/279 (22%), Positives = 102/279 (36%), Gaps = 34/279 (12%) Query: 2 SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 S +T+ T N+N + + I LA WIK +P + C+QET ++ ++ + Sbjct: 6 SHITILTLNINGLNSAIKRHRLANWIKSQDPSVCCIQETHLTCRDTHRLKIKGWRKIYQA 65 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 G++ GVAIL + T D + +I +I + L I N+Y P+ Sbjct: 66 NGKQKKAGVAILVSDKTDFKPT---KIKRDKEGHYIMVKGSIQQEELTILNIYAPNTGAP 122 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K + + +L+ + GD+N D D Sbjct: 123 RFIKQ-----------VLSDLQRDLDSHTLIMGDFNTPLSTLDRSTRQKVNKDT------ 165 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 ++ L D R H Y+F+ ++SK IDHI+ S S Sbjct: 166 QELNSALHQADLIDIYRTLHPKSTEYTFFSAPHHTYSK-----IDHIVGSKALLSKCKRT 220 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278 I T SDH+ + + L I Q ST+ + Sbjct: 221 EIITNYL-----SDHSAIKLELRI--KNLTQSRSTTWKL 252 >gi|2072977|gb|AAC51279.1| putative p150 [Homo sapiens] Length = 1275 Score = 85.6 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 62/279 (22%), Positives = 103/279 (36%), Gaps = 34/279 (12%) Query: 2 SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 S +T+ T N+N + + I LA+WIK +P + C+QET ++ ++ + Sbjct: 6 SHITILTLNINGLNSAIKRHRLASWIKSQDPSVCCIQETHLTCRDTHRLKIKGWRKIYQA 65 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 G++ GVAIL + T D + +I +I + L I N+Y P+ Sbjct: 66 NGKQKKAGVAILVSDKTDFKPT---KIKRDKEGHYIMVKGSIQQEELTILNIYAPNTGAP 122 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K + + +L+ + GD+N D D Sbjct: 123 RFIKQ-----------VLSDLQRDLDSHTLIMGDFNTPLSTLDRSTRQKVNKDT------ 165 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 ++ L D R H Y+F+ ++SK IDHI+ S S Sbjct: 166 QELNSALHQADLIDIYRTLHPKSTEYTFFSAPHHTYSK-----IDHIVGSKALLSKCKRT 220 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278 I T SDH+ + + L I Q ST+ + Sbjct: 221 EIITNYL-----SDHSAIKLELRI--KNLTQSRSTTWKL 252 >gi|5070622|gb|AAD39215.1|AF148856_2 unknown [Homo sapiens] Length = 1275 Score = 85.6 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 62/279 (22%), Positives = 103/279 (36%), Gaps = 34/279 (12%) Query: 2 SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 S +T+ T N+N + + I LA+WIK +P + C+QET ++ ++ + Sbjct: 6 SHITILTLNINGLNSAIKRHRLASWIKSQDPSVCCIQETHLTCRDTHRLKIKGWRKIYQA 65 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 G++ GVAIL + T D + +I +I + L I N+Y P+ Sbjct: 66 NGKQKKAGVAILVSDKTDFKPT---KIKRDKEGHYIMVKGSIQQEELTILNIYAPNTGAP 122 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K + + +L+ + GD+N D D Sbjct: 123 RFIKQ-----------VLSDLQRDLDSHTLIMGDFNTPLSTLDRSTRQKVNKDT------ 165 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 ++ L D R H Y+F+ ++SK IDHI+ S S Sbjct: 166 QELNSALHQADLIDIYRTLHPKSTEYTFFSAPHHTYSK-----IDHIVGSKALLSKCKRT 220 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278 I T SDH+ + + L I Q ST+ + Sbjct: 221 EIITNYL-----SDHSAIKLELRI--KNLTQSRSTTWKL 252 >gi|339777|gb|AAB59368.1| ORF2 contains a reverse transcriptase domain [Homo sapiens] Length = 1275 Score = 85.6 bits (210), Expect = 8e-15, Method: Composition-based stats. Identities = 62/279 (22%), Positives = 103/279 (36%), Gaps = 34/279 (12%) Query: 2 SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 S +T+ T N+N + + I LA+WIK +P + C+QET ++ ++ + Sbjct: 6 SHITILTLNINGLNSAIKRHRLASWIKSQDPSVCCIQETHLTCRDTHRLKIKGWRKIYQA 65 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 G++ GVAIL + T D + +I +I + L I N+Y P+ Sbjct: 66 NGKQKKAGVAILVSDKTDFKPT---KIKRDKEGHYIMVKGSIQQEELTILNIYAPNTGAP 122 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K + + +L+ + GD+N D D Sbjct: 123 RFIKQ-----------VLSDLQRDLDSHTLIMGDFNTPLSTLDRSTRQKVNKDT------ 165 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 ++ L D R H Y+F+ ++SK IDHI+ S S Sbjct: 166 QELNSALHQADLIDIYRTLHPKSTEYTFFSAPHHTYSK-----IDHIVGSKALLSKCKRT 220 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278 I T SDH+ + + L I Q ST+ + Sbjct: 221 EIITNYL-----SDHSAIKLELRI--KNLTQSRSTTWKL 252 >gi|2072953|gb|AAC51264.1| putative p150 [Homo sapiens] Length = 1275 Score = 85.2 bits (209), Expect = 8e-15, Method: Composition-based stats. Identities = 61/279 (21%), Positives = 100/279 (35%), Gaps = 34/279 (12%) Query: 2 SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 S +T+ T N+N + + I LA+WIK +P + C+QET ++ ++ + Sbjct: 6 SHITILTLNINGLNSAIKRHRLASWIKSQDPSVCCIQETHLTCRDTHRLKIKGWRKIYQA 65 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 G+ GVAIL + T D + +I +I + L I N Y P+ Sbjct: 66 NGKHKKAGVAILVSDKTDFKPT---KIKRDKEGHYIMVKGSIQQEELTILNTYAPNTGAP 122 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K + + +L+ + GD+N D D Sbjct: 123 RFIKQ-----------VLSDLQRDLDSHTLIMGDFNTPLSTLDRSTRQKVNKDT------ 165 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 ++ L R H Y+F+ ++SK IDHI+ S S Sbjct: 166 QELNSALHQADLIGIYRTLHPKSTEYTFFSAPHHTYSK-----IDHIVGSKALLSKCKRT 220 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278 I T SDH+ + + L I Q ST+ + Sbjct: 221 EIITNYL-----SDHSAIKLELRI--KNLTQSRSTTWKL 252 >gi|2136112|pir||S65824 reverse transcriptase homolog - human transposon L1.1 gi|339771|gb|AAA51622.1| ORF2 [Homo sapiens] Length = 1275 Score = 85.2 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 62/279 (22%), Positives = 103/279 (36%), Gaps = 34/279 (12%) Query: 2 SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 S +T+ T N+N + + I LA+WIK +P + C+QET ++ ++ + Sbjct: 6 SHITILTLNINGLNSAIKRHRLASWIKSQDPSVCCIQETHLTCRDTHRLKIKGWRKIYQA 65 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 G++ GVAIL + T D + +I +I + L I N+Y P+ Sbjct: 66 NGKQKKAGVAILVSDKTDFKPT---KIKRDKEGHYIMVKGSIQQEELTILNIYAPNTGAP 122 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K + + +L+ + GD+N D D Sbjct: 123 RFIKQ-----------VLSDLQRDLDSHTLIMGDFNTPLSTLDRSTRQKVNKDT------ 165 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 ++ L D R H Y+F+ ++SK IDHI+ S S Sbjct: 166 QELNSALHQADLIDIYRTLHPKSTEYTFFSAPHHTYSK-----IDHIVGSKALLSKCKRT 220 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278 I T SDH+ + + L I Q ST+ + Sbjct: 221 EIITNYL-----SDHSAIKLELRI--KNLTQSRSTTWKL 252 >gi|146399949|gb|ABQ28691.1| apn1 [Neosartorya fischeri] Length = 581 Score = 85.2 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 29/280 (10%), Positives = 68/280 (24%), Gaps = 45/280 (16%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET-------------CGQKSYNG 67 + ++ DI+ QETK + K+ + + + + Sbjct: 1 MFDILE---ADIVVFQETKIQRKDLRDDMVLVPGWDCYFSLPKTKKEEGLAGVLCPPNSS 57 Query: 68 VAILSKYQPIEIVTHLPGDDLDVQARFIEA------TFTINTQTLRIGNLYLPHGNPITS 121 V+ + ++ + + L + + +Y P + Sbjct: 58 VSFRDLPEEQQVGGYPTIEQLSELEVDAATLDSEGRCVILEFPAFVLLGIYSPANRDESR 117 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + + + + + I + + Sbjct: 118 DNFRHSFIDLMDARIRNLVAMGKRVFVTGDLNIAKGEIDAAHATEAIRKGTVTEDEFISV 177 Query: 182 SFQKLQNMG-------------------FTDAIRATHDTHHLYSFWDYYADSWSKNKGIR 222 +++ N F +Y+ W+ + N G R Sbjct: 178 PARRVFNQLLSDGRVIGQRDEGREIPVLFDICRSFHPGRRGMYTCWEQRIIARPGNYGSR 237 Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 ID+++ S + + I G SDH PV Sbjct: 238 IDYVLCSLDMQDWFSDSNIQEGLMG----SDHCPVYAVFK 273 >gi|111020869|ref|YP_703841.1| exodeoxyribonuclease III, C-terminal [Rhodococcus jostii RHA1] gi|110820399|gb|ABG95683.1| possible exodeoxyribonuclease III, C-terminal [Rhodococcus jostii RHA1] Length = 91 Score = 85.2 bits (209), Expect = 9e-15, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 31/68 (45%) Query: 196 RATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHT 255 + YS+W + + + G RID+ + +P +A D +P + SDH Sbjct: 24 QHHPGVDGPYSWWSWLGQGFVNDTGWRIDYHLATPRLAQAAVAAGTDREPAADRRMSDHA 83 Query: 256 PVIVSLDI 263 PV+V D+ Sbjct: 84 PVVVDYDL 91 >gi|17980447|gb|AAL50637.1| unknown [Homo sapiens] Length = 1275 Score = 84.8 bits (208), Expect = 1e-14, Method: Composition-based stats. Identities = 62/279 (22%), Positives = 103/279 (36%), Gaps = 34/279 (12%) Query: 2 SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 S +T+ T N+N + + I LA+WIK +P + C+QET ++ ++ + Sbjct: 6 SHITILTLNINGLNSAIKRHRLASWIKSQDPSVCCIQETHLTCRDTHRLKIKGWRKIYQA 65 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 G++ GVAIL + T D + +I +I + L I N+Y P+ Sbjct: 66 NGKQKKAGVAILVSDKTDFKPT---KIKRDKEGHYIMVKGSIQQEELTILNIYAPNTGAP 122 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K + + +L+ + GD+N D D Sbjct: 123 RFIKQ-----------VLSDLQRDLDSHTLIMGDFNTPLSTLDRSTRQKVNKDT------ 165 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 ++ L D R H Y+F+ ++SK IDHI+ S S Sbjct: 166 QELNSALHQADLIDIYRTLHPKSTEYTFFSAPHHTYSK-----IDHIVGSKALLSKCKRT 220 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278 I T SDH+ + + L I Q ST+ + Sbjct: 221 EIITNYL-----SDHSAIKLELRI--KNLTQSHSTTWKL 252 >gi|29501194|dbj|BAC67539.1| DNA lyase [Isaria tenuipes] Length = 607 Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 50/301 (16%), Positives = 84/301 (27%), Gaps = 61/301 (20%) Query: 17 RIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN---YHIETCGQKSYNGVA--- 69 R A DI+ LQETK + K+ + + Y +K Y+GVA Sbjct: 15 REKRTFQAMFDILEADIVILQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYT 74 Query: 70 ---ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN--------- 117 + E + + + + L Sbjct: 75 KNATCAPILAEEGILGILCPPKSNTPYREQPEDRQIGGYPTLAQLSGDVDEALLDSEGRC 134 Query: 118 -----------------PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP 160 ++ + + S+++ + + +I GD NII Sbjct: 135 LILEFPAFVLFGVYSPANRDESRIEFRQSFVEALEARIRNLIAAGKQVILTGDLNIIRSE 194 Query: 161 HDCYNPIIWENDACFTLEVRQSFQKLQ--------------------NMGFTDAIRATHD 200 D N T+E QS + + D R H Sbjct: 195 MDSSNVAEGLKKEGMTMEEWQSMPTRRILNQLLFDGSVIGPRDKAREDGVLWDICRCFHP 254 Query: 201 -THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 +++ WD ++ N G RID+I+ S + I G SDH PV Sbjct: 255 TRRGMHTCWDTKRNTRPANLGSRIDYILCSDGIKDWFVDSNIQEGLMG----SDHCPVYA 310 Query: 260 S 260 + Sbjct: 311 T 311 >gi|281353908|gb|EFB29492.1| hypothetical protein PANDA_003905 [Ailuropoda melanoleuca] Length = 319 Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 49/277 (17%), Positives = 88/277 (31%), Gaps = 34/277 (12%) Query: 7 ATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64 + N+N + + I +A WIK ++P I CLQET E K+ ++ + G + Sbjct: 1 ISINLNGLNSPIKRHRVADWIKRHDPSICCLQETHFEPKDAFRLRVRGWSTIFHANGPQK 60 Query: 65 YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124 GVAIL + + + + I + Sbjct: 61 KAGVAILISDRLDF--------------KLEAIERDTEGHYIILKGSIQQVDMTIINIYA 106 Query: 125 DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ 184 ++ + + +++ + GD N D E + Sbjct: 107 PNRGAARYTSQLLTKIKRHIDKNTVIVGDLNTPLSEIDRTPWQKLSK------ESKALNA 160 Query: 185 KLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK 244 L + D R H YSF+ ++S RIDH + S I Sbjct: 161 ILDELDLIDIYRTLHPRTKEYSFYSNAHGTFS-----RIDHALGHKTGLSQYQKIEIIPC 215 Query: 245 PRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 SDH + + L+ K ++S + ++ I Sbjct: 216 I-----FSDHNALKLELN--HKEKPGRNSNTWRLRTI 245 >gi|2120083|pir||I38588 reverse transcriptase homolog - human retrotransposon L1 gi|483916|gb|AAB60345.1| ORF2 [Homo sapiens] Length = 1275 Score = 84.5 bits (207), Expect = 1e-14, Method: Composition-based stats. Identities = 62/279 (22%), Positives = 103/279 (36%), Gaps = 34/279 (12%) Query: 2 SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 S +T+ T N+N + + I LA+WIK +P + C+QET ++ ++ + Sbjct: 6 SHITILTLNINGLNSAIKRHRLASWIKSQDPSVCCIQETHLMCRDTHRLKIKGWRKIYQA 65 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 G++ GVAIL + T D + +I +I + L I N+Y P+ Sbjct: 66 NGKQKKAGVAILVSDKTDFKPT---KIKRDKEGHYIMVKGSIQQEELTILNIYAPNTGAP 122 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K + + +L+ + GD+N D D Sbjct: 123 RFIKQ-----------VLSDLQRDLDSHTLIMGDFNTPLSILDRSTRQKVNKDT------ 165 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 ++ L D R H Y+F+ ++SK IDHI+ S S Sbjct: 166 QELNSALHQADLIDIYRTLHPKSTEYTFFSAPHHTYSK-----IDHIVGSKALLSKCKRT 220 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278 I T SDH+ + + L I Q ST+ + Sbjct: 221 EIITNYL-----SDHSAIKLELRI--KNLTQSRSTTWKL 252 >gi|294901077|ref|XP_002777223.1| retrovirus polyprotein, putative [Perkinsus marinus ATCC 50983] gi|239884754|gb|EER09039.1| retrovirus polyprotein, putative [Perkinsus marinus ATCC 50983] Length = 2861 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 54/291 (18%), Positives = 96/291 (32%), Gaps = 39/291 (13%) Query: 7 ATWNVNSIRARIHN------LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN-----Y 55 +WN+N +R + + L ++ P I+ L ETK + + L+ Y Sbjct: 836 LSWNINGLRGFLKSEANVSCLNRLVRNELPAIMVLTETKLTQEKKDRAFTKLLDSLPVRY 895 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARF------------IEATFTINT 103 + + G A ++ + + E T + Sbjct: 896 DVFSAESAGRKGYAGVAVLLKRAVDVGYDDGLCLIHEPITGIPSRFFDGEQDEEEDTTSG 955 Query: 104 QTLRIGNLYL--------PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYN 155 + L I G + +Y K R + E+PLI AGD N Sbjct: 956 RVLTIELRQCTLVAVYVPNSGGDLRFLEYRSKWDVAFRRYMKWLRSRAGEKPLIIAGDLN 1015 Query: 156 IIPQPHDCYNPIIWENDACFTL--EVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYA 212 D + + EV + + + D R H +YSF+ Sbjct: 1016 ACGSDLDIGDTRREAPHSPSIQPCEVEAFERLQREVSLCDTFRIVHPEVAGVYSFYC--- 1072 Query: 213 DSWSK--NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +++ K N G RID+I++S E + + + + G DH P++ L Sbjct: 1073 NAYEKKLNFGRRIDYILVSSEQSDCVVDSTVFYAEFGLGYRPDHCPILAEL 1123 >gi|294899286|ref|XP_002776572.1| retrovirus polyprotein, putative [Perkinsus marinus ATCC 50983] gi|239883614|gb|EER08388.1| retrovirus polyprotein, putative [Perkinsus marinus ATCC 50983] Length = 2563 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 54/291 (18%), Positives = 96/291 (32%), Gaps = 39/291 (13%) Query: 7 ATWNVNSIRARIHN------LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN-----Y 55 +WN+N +R + + L ++ P I+ L ETK + + L+ Y Sbjct: 560 LSWNINGLRGFLKSEANVSCLNRLVRNELPAIMVLTETKLTQEKKDRAFTKLLDSLPVRY 619 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARF------------IEATFTINT 103 + + G A ++ + + E T + Sbjct: 620 DVFSAESAGRKGYAGVAVLLKRAVDVGYDDGLCLIHEPITGIPSRFFDGEQDEEEDTTSG 679 Query: 104 QTLRIGNLYL--------PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYN 155 + L I G + +Y K R + E+PLI AGD N Sbjct: 680 RVLTIELRQCTLVAVYVPNSGGDLRFLEYRSKWDVAFRRYMKWLRSRAGEKPLIIAGDLN 739 Query: 156 IIPQPHDCYNPIIWENDACFTL--EVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYA 212 D + + EV + + + D R H +YSF+ Sbjct: 740 ACGSDLDIGDTRREAPHSPSIQPCEVEAFERLQREVSLCDTFRIVHPEVAGVYSFYC--- 796 Query: 213 DSWSK--NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +++ K N G RID+I++S E + + + + G DH P++ L Sbjct: 797 NAYEKKLNFGRRIDYILVSSEQSDCVVDSTVFYAEFGLGYRPDHCPILAEL 847 >gi|23004987|ref|ZP_00048036.1| COG0708: Exonuclease III [Magnetospirillum magnetotacticum MS-1] Length = 106 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 1/70 (1%) Query: 188 NMGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLLHSARIDTKPR 246 A T + +Y++W Y + W+ NKG R+DH +SP+ L + + R Sbjct: 19 AGWIDAARFLTPEPEKIYTWWSYRSPDWAAANKGRRLDHAWVSPDLAGTLRKVEVFREAR 78 Query: 247 GWTKPSDHTP 256 GW KPSDH P Sbjct: 79 GWEKPSDHAP 88 >gi|221132889|ref|XP_002158912.1| PREDICTED: similar to predicted protein, partial [Hydra magnipapillata] Length = 98 Score = 84.5 bits (207), Expect = 2e-14, Method: Composition-based stats. Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 5/101 (4%) Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIR 222 NP + +A FT E R F L G+ D R + Y+FW Y ++ SKNKG R Sbjct: 2 ANPNSNKRNAGFTEEERSDFTALLEDGYIDTFRKLNPEKTGAYTFWTYMMNARSKNKGWR 61 Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +D+ +++ + + + I + G SDH P++++L I Sbjct: 62 LDYFIVTKDIEDDICDSVIRSSVMG----SDHCPIVLNLAI 98 >gi|315654117|ref|ZP_07907033.1| exodeoxyribonuclease III [Lactobacillus iners ATCC 55195] gi|325912295|ref|ZP_08174692.1| putative exodeoxyribonuclease III [Lactobacillus iners UPII 143-D] gi|315488813|gb|EFU78459.1| exodeoxyribonuclease III [Lactobacillus iners ATCC 55195] gi|325475954|gb|EGC79123.1| putative exodeoxyribonuclease III [Lactobacillus iners UPII 143-D] Length = 168 Score = 84.1 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 10/167 (5%) Query: 100 TINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159 T+ + + +Y P+ D +I K + L+ +P+I +GDYN+ Q Sbjct: 9 TLEFNSFYLTQVYTPNSGNELKRLADREIWDTK--YQEYLTELDQNKPVIASGDYNVAHQ 66 Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYY-ADSWSK 217 D +P ++A FT E R+ F KL ++GF D R + D +YS+W S + Sbjct: 67 EIDLKHPETNHHNAGFTDEERKGFSKLLSLGFIDTFRYINGDITDVYSWWSQRIRTSKTN 126 Query: 218 NKGIRIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 N G RID+ ++S + ++ IDT R DH P+++ +D+ Sbjct: 127 NAGWRIDYYLVSQRLADKIEQSKMIDTGDRK-----DHCPILLKIDL 168 >gi|257879257|ref|ZP_05658910.1| exodeoxyribonuclease [Enterococcus faecium 1,230,933] gi|257813485|gb|EEV42243.1| exodeoxyribonuclease [Enterococcus faecium 1,230,933] Length = 171 Score = 84.1 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 29/149 (19%), Positives = 54/149 (36%), Gaps = 7/149 (4%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ +WNVN +RA + N E + D CLQETK + + L + Sbjct: 19 LLKFISWNVNGLRAIVNKNFLEVFHELDADFFCLQETKLQAGQIDLD-LPGYYQYWNYAE 77 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +K Y+G AI +K + + D D + R I ++ + Sbjct: 78 RKGYSGTAIFAKKPALNATYGMGIDIHDTEGRLITLEYSDF-----FLVTCYTPNSQSEL 132 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIF 150 + D ++ W + F + + + Sbjct: 133 KRLDYRLEWEEAFYNYLENLKKQKTSHRV 161 >gi|221104979|ref|XP_002163931.1| PREDICTED: similar to APEX nuclease (multifunctional DNA repair enzyme) 1, partial [Hydra magnipapillata] Length = 184 Score = 84.1 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 26/95 (27%), Positives = 50/95 (52%), Gaps = 14/95 (14%) Query: 2 SVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQ--------- 51 S + + +WNV +RA + N ++ E +PD++CLQETK + + P + LQ Sbjct: 29 STLKICSWNVAGLRAWVNKNGLNYVIEEDPDVLCLQETKCTENDLPGQVLQMKNGPKVTN 88 Query: 52 --SLNYHIETCG--QKSYNGVAILSKYQPIEIVTH 82 + Y++ C +K +GV++ K +P+++ Sbjct: 89 VSNSGYYMYWCNAKKKGCSGVSLWCKLKPLKVTYG 123 >gi|309804045|ref|ZP_07698126.1| putative exodeoxyribonuclease III [Lactobacillus iners LactinV 11V1-d] gi|309804894|ref|ZP_07698956.1| putative exodeoxyribonuclease III [Lactobacillus iners LactinV 09V1-c] gi|309807812|ref|ZP_07701744.1| putative exodeoxyribonuclease III [Lactobacillus iners LactinV 01V1-a] gi|309809734|ref|ZP_07703588.1| putative exodeoxyribonuclease III [Lactobacillus iners SPIN 2503V10-D] gi|308163813|gb|EFO66079.1| putative exodeoxyribonuclease III [Lactobacillus iners LactinV 11V1-d] gi|308165833|gb|EFO68054.1| putative exodeoxyribonuclease III [Lactobacillus iners LactinV 09V1-c] gi|308168914|gb|EFO71000.1| putative exodeoxyribonuclease III [Lactobacillus iners LactinV 01V1-a] gi|308169913|gb|EFO71952.1| putative exodeoxyribonuclease III [Lactobacillus iners SPIN 2503V10-D] Length = 168 Score = 84.1 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 48/167 (28%), Positives = 81/167 (48%), Gaps = 10/167 (5%) Query: 100 TINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159 T+ T + +Y P+ D +I K + +L+ +P+I +GDYN+ Q Sbjct: 9 TLEFDTFYLTQVYTPNSGNELKRLADREIWDTK--YQEYLAKLDQNKPVIASGDYNVAHQ 66 Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYY-ADSWSK 217 D +P ++A FT E R+ F KL ++GF D R + D +YS+W S + Sbjct: 67 EIDLKHPETNHHNAGFTDEERKGFSKLLSLGFIDTFRYINGDITDVYSWWSQRIRTSKTN 126 Query: 218 NKGIRIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 N G RID+ ++S + ++ IDT R DH P+++ +D+ Sbjct: 127 NAGWRIDYYLVSQRLADKIEQSKMIDTGDRK-----DHCPILLKIDL 168 >gi|281354577|gb|EFB30161.1| hypothetical protein PANDA_018242 [Ailuropoda melanoleuca] Length = 354 Score = 84.1 bits (206), Expect = 2e-14, Method: Composition-based stats. Identities = 51/277 (18%), Positives = 90/277 (32%), Gaps = 34/277 (12%) Query: 7 ATWNVNSIRARI--HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64 T NV+ ++A + H +A WIK ++P I CLQET E K+ ++ + G + Sbjct: 1 LTLNVSGLKATLNHHRVADWIKRHDPSICCLQETHFEPKDAFRLRVRGWSTIFHANGPQK 60 Query: 65 YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124 GVAIL + + + + I + Sbjct: 61 KAGVAILISDRLDF--------------KLEAIERDTEGHYIILKGSIQQVDMTIINIYA 106 Query: 125 DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ 184 ++ + + +++ + GD N D E + Sbjct: 107 PNRGAARYTSQLLTKIKRHIDKNTVIVGDLNTPLSEIDRTPWQKLSK------ESKALNA 160 Query: 185 KLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK 244 L + D R H YSF+ ++S RIDH + S I Sbjct: 161 ILDELDLIDIYRTLHPRTKEYSFYSNAHGTFS-----RIDHALGHKTGLSQYQKIEIIPC 215 Query: 245 PRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 SDH + + L+ K ++S + ++ I Sbjct: 216 I-----FSDHNALKLELN--HKEKPGRNSNTWRLRTI 245 >gi|90077432|dbj|BAE88396.1| unnamed protein product [Macaca fascicularis] Length = 173 Score = 83.7 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 5/114 (4%) Query: 2 SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN----YH 56 + + + +WNV+ +RA I W+KE PDI+ LQETK + P E + Y Sbjct: 60 ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILRLQETKCSENKLPAELQELPGLSHQYW 119 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 ++ Y+GV +LS++ P+++ + ++ D + R I A F + Sbjct: 120 SAPSDKEGYSGVGLLSRHCPLKVSYGIGEEEHDQEGRVIVAEFDSFVLVTTVCT 173 >gi|74007557|ref|XP_538066.2| PREDICTED: similar to LINE-1 reverse transcriptase homolog [Canis familiaris] Length = 1275 Score = 83.7 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 61/282 (21%), Positives = 101/282 (35%), Gaps = 34/282 (12%) Query: 2 SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 S +++AT NVN + I ++ WIK+ +P I CLQET K+ ++ + Sbjct: 6 SYLSIATLNVNGLNDTIKRRRVSDWIKKQDPSICCLQETHFRQKDTYSLKIKGWRTIYHS 65 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 G + GV IL + D + +I +I + LRI N+Y P+ Sbjct: 66 NGPQKKAGVTILISDKLKFTPK---TVVRDEEGHYIILKGSIQQEDLRIINIYAPNVGAA 122 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + L+ + GD+ + D + E Sbjct: 123 KYINQ-----------LLTKVKKYLDNNTLILGDFKLALSILDRSSKHNISK------ET 165 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R L M FTD R H Y+F+ ++S RIDHI+ + Sbjct: 166 RALNDTLDQMDFTDIYRTLHPNSTEYTFFSSAHGTFS-----RIDHILGHKSGLNRYQKI 220 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 I SDH + + L+ +K + S + ++ I Sbjct: 221 GIVPCI-----FSDHNALKLELN--HNKKFGRTSNTWRLRTI 255 >gi|74007944|ref|XP_850691.1| PREDICTED: similar to LINE-1 reverse transcriptase homolog [Canis familiaris] Length = 1196 Score = 83.7 bits (205), Expect = 3e-14, Method: Composition-based stats. Identities = 61/282 (21%), Positives = 101/282 (35%), Gaps = 34/282 (12%) Query: 2 SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 S +++ T NVN + I ++ WIK+ +P I CLQET K+ ++ + Sbjct: 5 SYLSIVTLNVNGLNDPIKRRRISDWIKKQDPSICCLQETHFRQKDTYSLKIKGWRTIYHS 64 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 G + GVAIL + D + +I +I + L I N+Y P+ Sbjct: 65 NGPQKKAGVAILISDKLKFTPK---TVVRDEEGHYIILKGSIQQEDLTILNIYAPNVGAA 121 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + L+ + GD+N+ D + E Sbjct: 122 KYINQ-----------LLTKVKKYLDNNTLILGDFNLALSILDRSSKHNISK------ET 164 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R L M FTD R H Y+F+ ++S RIDHI+ + Sbjct: 165 RALNDTLDQMDFTDIYRTLHPNSTEYTFFSSAHGTFS-----RIDHILGHKSGLNRYQKI 219 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 I SDH + + L+ +K + S + ++ I Sbjct: 220 GIVPCI-----FSDHNALKLELN--HNKKFGRTSNTWRLRTI 254 >gi|124441686|gb|ABN11482.1| DNA lyase [Ascosphaera apis] Length = 533 Score = 83.3 bits (204), Expect = 3e-14, Method: Composition-based stats. Identities = 36/295 (12%), Positives = 68/295 (23%), Gaps = 49/295 (16%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80 + ++ DI+ LQETK + K+ + + + K + Sbjct: 1 MFDVLE---ADIVVLQETKIQRKDLRDDMVLVPGWDCFFSFPKYKKDGITGINPSTTKDT 57 Query: 81 THLPGDDLDVQARFIEATF------------------TINTQTLRIGNLYLPHGNPITST 122 + + + Q + +YLP Sbjct: 58 AFRDLPSHEQIGGYPSEEQLNLSLVDAETLDSEGRCVILEFQAFVLIGVYLPAVRNELRD 117 Query: 123 KYDDKISWIKRFLRFASQRLELEEP-------------------LIFAGDYNIIPQPHDC 163 + + L + + Sbjct: 118 DFRLGFLRVFECRVRNLIALGKRIIVAGDLNISRDVQDSASALADVLGERLSREQYISTP 177 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIR 222 + E + D R H +++ WD ++ N G R Sbjct: 178 SRALFNELVTDSSDYDSSEPNNNAQCVLWDICRDFHPSRKGMFTCWDMKTNARPGNFGSR 237 Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD----IPEPRKKQQDS 273 ID+I+ S +A G SDH PV L + + +D Sbjct: 238 IDYILCSLNIRDWFVAADAQQHLMG----SDHCPVFAVLKENILLDAKETRLRDV 288 >gi|291514133|emb|CBK63343.1| Exonuclease III [Alistipes shahii WAL 8301] Length = 297 Score = 83.3 bits (204), Expect = 4e-14, Method: Composition-based stats. Identities = 47/268 (17%), Positives = 81/268 (30%), Gaps = 16/268 (5%) Query: 4 VTVATWNV-NSIRAR-----IHNLAAWIKENNPDIICLQETKTED-KNFPFETLQ-SLNY 55 + + +N+ +R R A W+++ NPDI+ LQE D F ETL + Sbjct: 33 LKIICYNILYGMR-RDTTQGKRLFAEWVRQQNPDILALQEV--NDFTQFTLETLAAEYGH 89 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + + + ++V + Y Sbjct: 90 DYAVISKDPKLIPGSVGSRTKFPVSISSKSPVVNVDKVLDNMWHGFIKCKV---EGYNVI 146 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + Y+ + I+ L Q E+ +I + P Y + Sbjct: 147 VLHLNPHLYEARRREIRTVLETVKQSGLFEKWIIMGDFNTVSPLDSAVYADGKYLQRKKE 206 Query: 176 TLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 +V L + A+ D + + W + RID I +SP+ Sbjct: 207 QEKVHTRNNNLPDGQLDFAVSQAILDFGFVDAGWADRENYRKDGFTRRIDFIYVSPDLRD 266 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + S R T SDH PV + L Sbjct: 267 RIVSCRYITDDFTAAY-SDHIPVELVLK 293 >gi|225047|prf||1207289A reverse transcriptase related protein Length = 1259 Score = 82.9 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 64/279 (22%), Positives = 102/279 (36%), Gaps = 34/279 (12%) Query: 2 SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 S +T+ T NVN + A I LA WIK +P + C+QET ++ ++ + Sbjct: 5 SHITILTLNVNGLNAPIKRHRLANWIKSQDPSVCCIQETHLTCRDTHRLKIKGWRNIYQA 64 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 G++ GVAIL + T D + +I +I + L I N+Y P+ Sbjct: 65 NGKQKKAGVAILVSDKTDFKPT---KIKRDKEGHYIMVKGSIQQEELTILNIYAPNTGAP 121 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K + + +L+ I GD+N D D Sbjct: 122 RFIKQ-----------VLSDLQRDLDSHTIIMGDFNTPLSTLDRSTRQKINKDI------ 164 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 ++ L D R H Y+F+ ++SK DHI+ S S Sbjct: 165 QELNSALHQADLIDIYRTLHPKSTEYTFFSAPHHTYSKT-----DHILGSKTLLSKCKRT 219 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278 I T SDH+ + + L I + Q ST+ + Sbjct: 220 EIITNCL-----SDHSAIKLELRI--KKLTQNHSTTWKL 251 >gi|152149537|pdb|2V0R|A Chain A, Crystal Structure Of A Hairpin Exchange Variant (Ltx) Of The Targeting Line-1 Retrotransposon Endonuclease gi|152149538|pdb|2V0R|B Chain B, Crystal Structure Of A Hairpin Exchange Variant (Ltx) Of The Targeting Line-1 Retrotransposon Endonuclease Length = 240 Score = 82.9 bits (203), Expect = 4e-14, Method: Composition-based stats. Identities = 57/262 (21%), Positives = 96/262 (36%), Gaps = 30/262 (11%) Query: 2 SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 S +T+ T N+N + + I LA+WIK +P + C+QET ++ ++ + Sbjct: 6 SHITILTLNINGLNSAIKRHRLASWIKSQDPSVCCIQETHLTCRDTHRLKIKGWRKIYQA 65 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 G++ GVAIL + T D + +I +I + L I N+Y P+ Sbjct: 66 NGKQKKAGVAILVSDKTDFKPT---KIKRDKEGHYIMVKGSIQQEELTILNIYAPNTGAP 122 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K + + +L+ + GD+N D D Sbjct: 123 RFIKQ-----------VLSDLQRDLDSHTLIMGDFNTPLSTLDRSTRQKVNKDT------ 165 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 ++ L D R H Y++ S++K IDHI+ S S Sbjct: 166 QELNSALHQADLIDIYRTLHPKSTEYTYVRVRDGHVSQSK---IDHIVGSKALLSKCKRT 222 Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261 I T SDH+ + + L Sbjct: 223 EIITNYL-----SDHSAIKLEL 239 >gi|2072964|gb|AAC51271.1| putative p150 [Homo sapiens] Length = 1275 Score = 82.9 bits (203), Expect = 5e-14, Method: Composition-based stats. Identities = 63/279 (22%), Positives = 103/279 (36%), Gaps = 34/279 (12%) Query: 2 SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 S +T+ T NVN + + I LA+WIK +P + C+QET ++ ++ + Sbjct: 6 SHITILTLNVNGLNSPIKRHRLASWIKSQDPSVCCIQETHLTCRDTHRLKIKGWRKIYQA 65 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 G++ GVAIL + T D + +I +I + L I N+Y P+ Sbjct: 66 NGKQKKAGVAILVSDKTDFKPT---KIKRDKEGHYIMVKGSIQQEELTILNIYAPNTGAP 122 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K + + +L+ + GD+N D D Sbjct: 123 RFIKQ-----------VLSDLQRDLDSHTLIMGDFNTPLSILDRSTRQKVNKDT------ 165 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 ++ L D R H Y+F+ ++SK IDHI+ S S Sbjct: 166 QELNSALHQTDLIDIYRTLHPKSTEYTFFSAPHHTYSK-----IDHIVGSKALLSKCKRT 220 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278 I T SDH+ + + L I Q ST+ + Sbjct: 221 EIITNYL-----SDHSAIKLELRI--KNLTQSRSTTWKL 252 >gi|162660705|gb|EDQ48496.1| predicted protein [Physcomitrella patens subsp. patens] Length = 153 Score = 82.5 bits (202), Expect = 5e-14, Method: Composition-based stats. Identities = 37/119 (31%), Positives = 62/119 (52%), Gaps = 3/119 (2%) Query: 2 SVVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFP--FETLQSLNYHIE 58 S+ + + N+N IR+ + AWI+ PD IC+QE K + + FE L L H Sbjct: 4 SLFKLTSLNLNGIRSASTKGVEAWIEATAPDCICVQEIKAQAADMTGRFELLAGLRGHFH 63 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 +K Y+GV + S+++P ++V + D + R++EA F + L I + Y P G+ Sbjct: 64 YAEKKGYSGVGVYSRHEPSDVVVGFGSHEFDAEGRYVEARFDTPARKLSIISAYFPSGS 122 >gi|330895700|gb|EGH27990.1| exodeoxyribonuclease III [Pseudomonas syringae pv. japonica str. M301072PT] Length = 181 Score = 82.5 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 41/183 (22%), Positives = 73/183 (39%), Gaps = 8/183 (4%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC-- 60 + + + NVN I+A + L +W++ N D+ICLQ+T+ Q Y + C Sbjct: 1 MRIISVNVNGIQAAVERGLLSWLQAQNADVICLQDTRASTFELDDPAFQLDGYFLYACEA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + GVA+ S+ QP +++ L + D R+++A F + I L P G Sbjct: 61 EVPAQGGVALYSRLQPKAVISGLGFETADRYGRYLQADFD----KVSIATLLFPSG-MNG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K + F ++ ++ I+ G + Q D N + F R Sbjct: 116 DEDLNQKFKLMDDFGKYMDKQRRKRREYIYCGSLYVAQQKLDIKNWRDSQQSPGFLAPER 175 Query: 181 QSF 183 Sbjct: 176 AWM 178 >gi|73966507|ref|XP_851979.1| PREDICTED: similar to LINE-1 reverse transcriptase homolog [Canis familiaris] Length = 1275 Score = 82.5 bits (202), Expect = 7e-14, Method: Composition-based stats. Identities = 61/282 (21%), Positives = 101/282 (35%), Gaps = 34/282 (12%) Query: 2 SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 S +++ T NVN + I ++ WIK+ +P I CLQET K+ ++ + Sbjct: 6 SYLSIVTLNVNGLNDPIKRRRVSDWIKKQDPSICCLQETHFRQKDTYSLKIKGWRTIYHS 65 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 G + GVAIL + D + +I +I + L I N+Y P+ Sbjct: 66 NGPQKKAGVAILISDKLKFTPK---TVVRDEEGHYIILQGSIQQEDLTILNIYAPNVGAA 122 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + L+ + GD+N+ D + E Sbjct: 123 KYINQ-----------LLTKVKKYLDNNTLILGDFNLALSILDRSSKHNISK------ET 165 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R L M FTD R H Y+F+ ++S RIDHI+ + Sbjct: 166 RALNDTLDQMDFTDIYRTLHPNSTEYTFFSSAHGTFS-----RIDHILGHKSGLNRYQKI 220 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 I SDH + + L+ +K + S + ++ I Sbjct: 221 GIVPCI-----FSDHNALKLELN--HNKKFGRTSNTWRLRTI 255 >gi|73973941|ref|XP_854759.1| PREDICTED: similar to LINE-1 reverse transcriptase homolog [Canis familiaris] Length = 1275 Score = 82.1 bits (201), Expect = 7e-14, Method: Composition-based stats. Identities = 61/282 (21%), Positives = 101/282 (35%), Gaps = 34/282 (12%) Query: 2 SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 S +++ T NVN + I ++ WIK+ +P I CLQET K+ ++ + Sbjct: 6 SYLSIVTLNVNGLNDPIKRRRVSDWIKKQDPSICCLQETHFRQKDTYSLKIKGWRTIYHS 65 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 G + GVAIL + D + +I +I + L I N+Y P+ Sbjct: 66 KGPQKKAGVAILISDKLKFTPK---TVVRDEEGHYIILKGSIQQEDLTILNIYAPNVGAA 122 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + L+ + GD+N+ D + E Sbjct: 123 KYINQ-----------LLTKVKKYLDNNTLILGDFNLALSILDRSSKHNISK------ET 165 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R L M FTD R H Y+F+ ++S RIDHI+ + Sbjct: 166 RALNDTLDQMDFTDIYRTLHPNSTEYTFFSSAHGTFS-----RIDHILGHKSGLNRYQKI 220 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 I SDH + + L+ +K + S + ++ I Sbjct: 221 GIVPCI-----FSDHNALKLELN--HNKKFGRTSNTWRLRTI 255 >gi|73985407|ref|XP_850132.1| PREDICTED: similar to LINE-1 reverse transcriptase homolog [Canis familiaris] Length = 1275 Score = 82.1 bits (201), Expect = 9e-14, Method: Composition-based stats. Identities = 61/282 (21%), Positives = 101/282 (35%), Gaps = 34/282 (12%) Query: 2 SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 S +++ T NVN + I ++ WIK+ +P I CLQET K+ ++ + Sbjct: 6 SYLSIVTLNVNGLNDPIKRRRVSDWIKKQDPSICCLQETHFRQKDTYSLKIKGWRTIYHS 65 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 G + GVAIL + D + +I +I + L I N+Y P+ Sbjct: 66 NGPQKKAGVAILISDKLKFTPK---TVVRDEEGHYIILKGSIQQEDLTILNIYAPNVGAA 122 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + L+ + GD+N+ D + E Sbjct: 123 KYINQ-----------LLTKVKKYLDNNTLILGDFNLALSILDRSSKQNISK------ET 165 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R L M FTD R H Y+F+ ++S RIDHI+ + Sbjct: 166 RALNDTLDQMDFTDIYRTLHPNSTEYTFFSSAHGTFS-----RIDHILGHKSGLNRYQKI 220 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 I SDH + + L+ +K + S + ++ I Sbjct: 221 GIVPCI-----FSDHNALKLELN--HNKKFGRTSNTWRLRTI 255 >gi|73976474|ref|XP_536180.2| PREDICTED: similar to LINE-1 reverse transcriptase homolog [Canis familiaris] Length = 1274 Score = 81.8 bits (200), Expect = 9e-14, Method: Composition-based stats. Identities = 61/282 (21%), Positives = 101/282 (35%), Gaps = 34/282 (12%) Query: 2 SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 S +++ T NVN + I ++ WIK+ +P I CLQET K+ ++ + Sbjct: 5 SYLSIVTLNVNGLNDPIKRRRVSDWIKKQDPSICCLQETHFRQKDTYSLKIKGWRTIYHS 64 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 G + GVAIL + D + +I +I + L I N+Y P+ Sbjct: 65 NGPQKKAGVAILISDKLKFTPK---TVVRDEEGHYIILKGSIQQEDLTILNIYAPNVGAA 121 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + L+ + GD+N+ D + E Sbjct: 122 KYINQ-----------LLTKVKKYLDNNTLILGDFNLALSILDRSSKQNISK------ET 164 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R L M FTD R H Y+F+ ++S RIDHI+ + Sbjct: 165 RALNDTLDQMDFTDIYRTLHPNSTEYTFFSSAHGTFS-----RIDHILGHKSGLNRYQKI 219 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 I SDH + + L+ +K + S + ++ I Sbjct: 220 GIVPCI-----FSDHNALKLELN--HNKKFGRTSNTWRLRTI 254 >gi|73973846|ref|XP_854069.1| PREDICTED: similar to LINE-1 reverse transcriptase homolog [Canis familiaris] Length = 1275 Score = 81.8 bits (200), Expect = 9e-14, Method: Composition-based stats. Identities = 61/282 (21%), Positives = 102/282 (36%), Gaps = 34/282 (12%) Query: 2 SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 S +++ T NVN + I ++ WIK+ +P I CLQET K+ ++ + Sbjct: 6 SYLSIVTLNVNGLNDPIKRRRVSDWIKKQDPSICCLQETHFRQKDTYSLKIKGWRTIYHS 65 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 G + GVAIL + D + +I +I + L I N+Y P+ Sbjct: 66 NGPQKKAGVAILISDKLKFTPK---TVVRDEEGHYIILKGSIQQEDLTILNIYAPNVGAA 122 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + L+ + GD+N+ D + E Sbjct: 123 KYINQ-----------LLTKVKKYLDNNTLILGDFNLALSILDRSSKQNISK------ET 165 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R L+ M FTD R H Y+F+ ++S RIDHI+ + Sbjct: 166 RALNDTLEQMDFTDIYRTLHPNSTEYTFFSSAHGTFS-----RIDHILGHKSGLNRYQKI 220 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 I SDH + + L+ +K + S + ++ I Sbjct: 221 GIVPCI-----FSDHNALKLELN--HNKKFGRTSNTWRLRTI 255 >gi|73981671|ref|XP_848422.1| PREDICTED: similar to LINE-1 reverse transcriptase homolog isoform 2 [Canis familiaris] Length = 1275 Score = 81.8 bits (200), Expect = 9e-14, Method: Composition-based stats. Identities = 61/282 (21%), Positives = 101/282 (35%), Gaps = 34/282 (12%) Query: 2 SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 S +++ T NVN + I ++ WIK+ +P I CLQET K+ ++ + Sbjct: 6 SYLSIVTLNVNGLNDPIKRRRVSDWIKKQDPSICCLQETHFRQKDTYSLKIKGWRTIYHS 65 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 G + GVAIL + D + +I +I + L I N+Y P+ Sbjct: 66 NGPQKKAGVAILISDKLKFTPK---TVVRDEEGHYIILKGSIQQEDLTILNIYAPNVGAA 122 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + L+ + GD+N+ D + E Sbjct: 123 KYINQ-----------LLTKVKKYLDNNTLILGDFNLALSILDRSSKQNISK------ET 165 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R L M FTD R H Y+F+ ++S RIDHI+ + Sbjct: 166 RALNDTLDQMDFTDIYRTLHPNSTEYTFFSSAHGTFS-----RIDHILGHKSGLNRYQKI 220 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 I SDH + + L+ +K + S + ++ I Sbjct: 221 GIVPCI-----FSDHNALKLELN--HNKKFGRTSNTWRLRTI 255 >gi|290969210|ref|ZP_06560735.1| putative exodeoxyribonuclease III [Megasphaera genomosp. type_1 str. 28L] gi|290780716|gb|EFD93319.1| putative exodeoxyribonuclease III [Megasphaera genomosp. type_1 str. 28L] Length = 144 Score = 81.8 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 27/135 (20%), Positives = 49/135 (36%), Gaps = 7/135 (5%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNVN +RA + + D CLQETK + L + + Sbjct: 1 MNCISWNVNGLRAVMKKGFMDVFTALDADFFCLQETKLQAGQIEMN-LPGYYQYWNYADR 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 K Y+G AI +K++P+ + L D D + R I + + Sbjct: 60 KGYSGTAIFTKHRPLAVTYGLGIDRHDHEGRLITLEYPT-----YYLITCYTPNSQNELA 114 Query: 123 KYDDKISWIKRFLRF 137 + +++W + Sbjct: 115 RLPYRLTWEDDCRNY 129 >gi|67606491|ref|XP_666752.1| dna-(apurinic or apyrimidinic site) lyase [Cryptosporidium hominis TU502] gi|54657802|gb|EAL36520.1| dna-(apurinic or apyrimidinic site) lyase [Cryptosporidium hominis] Length = 498 Score = 81.8 bits (200), Expect = 1e-13, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 36/115 (31%), Gaps = 10/115 (8%) Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 A + T++ Y+ W S +N+G RID ++S Sbjct: 286 KAYMHMRRMNIEMIKGYCLVDAYRHYYPRTNNKYTCWSQMNQSRIRNQGTRIDLFLVSKG 345 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIV-----SLD-IPEPRKKQQDSTSQNMKP 280 S I G SDH P+++ + + K++ S P Sbjct: 346 LISESIKCEILDHIYG----SDHCPILLILKTGEFESLYNNEKRKPPSICSKYLP 396 >gi|73981669|ref|XP_856017.1| PREDICTED: similar to LINE-1 reverse transcriptase homolog isoform 4 [Canis familiaris] Length = 1252 Score = 81.4 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 61/282 (21%), Positives = 101/282 (35%), Gaps = 34/282 (12%) Query: 2 SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 S +++ T NVN + I ++ WIK+ +P I CLQET K+ ++ + Sbjct: 6 SYLSIVTLNVNGLNDPIKRRRVSDWIKKQDPSICCLQETHFRQKDTYSLKIKGWRTIYHS 65 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 G + GVAIL + D + +I +I + L I N+Y P+ Sbjct: 66 NGPQKKAGVAILISDKLKFTPK---TVVRDEEGHYIILKGSIQQEDLTILNIYAPNVGAA 122 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + L+ + GD+N+ D + E Sbjct: 123 KYINQ-----------LLTKVKKYLDNNTLILGDFNLALSILDRSSKQNISK------ET 165 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R L M FTD R H Y+F+ ++S RIDHI+ + Sbjct: 166 RALNDTLDQMDFTDIYRTLHPNSTEYTFFSSAHGTFS-----RIDHILGHKSGLNRYQKI 220 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 I SDH + + L+ +K + S + ++ I Sbjct: 221 GIVPCI-----FSDHNALKLELN--HNKKFGRTSNTWRLRTI 255 >gi|149002137|ref|ZP_01827091.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP14-BS69] gi|147759946|gb|EDK66936.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP14-BS69] Length = 245 Score = 81.4 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 47/240 (19%), Positives = 80/240 (33%), Gaps = 23/240 (9%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDK-------NFP 46 + + +WN++S+ A + + + N DII +QETK K Sbjct: 1 MKLISWNIDSLNAALTSDSARAKLSQEVLQTLVAENADIIAIQETKLSAKGPTKKHVEIL 60 Query: 47 FETLQSLN--YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 E + + + + + P T+ Sbjct: 61 EELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAPSTMDLEGRIITLEFD 120 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 + +Y P+ + ++ L+ E+P++ GDYN+ D Sbjct: 121 AFFVTQVYTPNAGDGLKRLEERQVWD--AKYAEYLAELDKEKPVLATGDYNVAHNEIDLA 178 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRI 223 NP FT E R F L GFTD R H D Y++W + + SKN+ R+ Sbjct: 179 NPASNRRSPGFTDEERAGFTNLLATGFTDTFRHVHGDVPERYTWWAQRSKT-SKNQQYRL 237 >gi|307702382|ref|ZP_07639339.1| exodeoxyribonuclease [Streptococcus oralis ATCC 35037] gi|307624059|gb|EFO03039.1| exodeoxyribonuclease [Streptococcus oralis ATCC 35037] Length = 219 Score = 81.4 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 45/224 (20%), Positives = 80/224 (35%), Gaps = 12/224 (5%) Query: 45 FPFETLQSLN--YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN 102 E + + + + + P T+ Sbjct: 3 ILEELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAPSTMDLEGRIITLE 62 Query: 103 TQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD 162 + + +Y P+ + ++ +K +L+ E+P++ GDYN+ + D Sbjct: 63 FEEFFVTQVYTPNAGDGLKRLEERQVWDVK--YAEYLAQLDKEKPVLATGDYNVAHKEID 120 Query: 163 CYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKG 220 NP FT E R F L GFTD R H D Y++W + S N G Sbjct: 121 LANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHLHGDVPECYTWWAQRSKTSKINNTG 180 Query: 221 IRIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 RID+ + S + + ID+ R DHTP+++ +++ Sbjct: 181 WRIDYWLTSNRVADKVTKSDMIDSGARQ-----DHTPIVLEIEL 219 >gi|331009393|gb|EGH89449.1| exodeoxyribonuclease III [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 163 Score = 81.4 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 39/166 (23%), Positives = 70/166 (42%), Gaps = 8/166 (4%) Query: 4 VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC-- 60 + + + NVN I+A + L +W++ N D+ICLQ+T+ Q Y + C Sbjct: 1 MRIISVNVNGIQAAVEGGLLSWLQAQNADVICLQDTRASTFELDDPAFQLDGYFLYACEA 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + GVA+ S+ QP +++ L + D R+++A F + I L P G Sbjct: 61 EVPAQGGVALYSRLQPKAVISGLGFETADRYGRYLQADFD----KVSIATLLFPSG-MNG 115 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 + K + F ++ ++ I+ G + Q D N Sbjct: 116 DEDLNQKFKLMDDFGKYMDKQRRKRREYIYCGSLYVAQQKLDIKNW 161 >gi|152149539|pdb|2V0S|A Chain A, Crystal Structure Of A Hairpin Exchange Variant (Lr1) Of The Targeting Line-1 Retrotransposon Endonuclease Length = 236 Score = 81.4 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 57/262 (21%), Positives = 94/262 (35%), Gaps = 34/262 (12%) Query: 2 SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 S +T+ T N+N + + I LA+WIK +P + C+QET ++ ++ + Sbjct: 6 SHITILTLNINGLNSAIKRHRLASWIKSQDPSVCCIQETHLTCRDTHRLKIKGWRKIYQA 65 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 G++ GVAIL + T D + +I +I + L I N+Y P+ Sbjct: 66 NGKQKKAGVAILVSDKTDFKPT---KIKRDKEGHYIMVKGSIQQEELTILNIYAPNTGAP 122 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K + + +L+ + GD+N D D Sbjct: 123 RFIKQ-----------VLSDLQRDLDSHTLIMGDFNTPLSTLDRSTRQKVNKDT------ 165 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 ++ L D R H Y+F +S IDHI+ S S Sbjct: 166 QELNSALHQADLIDIYRTLHPKSTEYTFSTANGESK-------IDHIVGSKALLSKCKRT 218 Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261 I T SDH+ + + L Sbjct: 219 EIITNYL-----SDHSAIKLEL 235 >gi|291533504|emb|CBL06617.1| Exonuclease III [Megamonas hypermegale ART12/1] Length = 70 Score = 81.4 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 1/54 (1%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56 + +WNVN +RA + + + DI CLQETK + + + Y Sbjct: 1 MKFVSWNVNGLRACMNKGFMETFQTLDADIFCLQETKMQPHQLELDLPEYKQYW 54 >gi|73981667|ref|XP_855978.1| PREDICTED: similar to LINE-1 reverse transcriptase homolog isoform 3 [Canis familiaris] Length = 1240 Score = 81.4 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 61/282 (21%), Positives = 101/282 (35%), Gaps = 34/282 (12%) Query: 2 SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 S +++ T NVN + I ++ WIK+ +P I CLQET K+ ++ + Sbjct: 6 SYLSIVTLNVNGLNDPIKRRRVSDWIKKQDPSICCLQETHFRQKDTYSLKIKGWRTIYHS 65 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 G + GVAIL + D + +I +I + L I N+Y P+ Sbjct: 66 NGPQKKAGVAILISDKLKFTPK---TVVRDEEGHYIILKGSIQQEDLTILNIYAPNVGAA 122 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + L+ + GD+N+ D + E Sbjct: 123 KYINQ-----------LLTKVKKYLDNNTLILGDFNLALSILDRSSKQNISK------ET 165 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R L M FTD R H Y+F+ ++S RIDHI+ + Sbjct: 166 RALNDTLDQMDFTDIYRTLHPNSTEYTFFSSAHGTFS-----RIDHILGHKSGLNRYQKI 220 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 I SDH + + L+ +K + S + ++ I Sbjct: 221 GIVPCI-----FSDHNALKLELN--HNKKFGRTSNTWRLRTI 255 >gi|171780197|ref|ZP_02921101.1| hypothetical protein STRINF_01985 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281545|gb|EDT46980.1| hypothetical protein STRINF_01985 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 168 Score = 81.4 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 41/136 (30%), Positives = 61/136 (44%), Gaps = 8/136 (5%) Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG 190 L+ ++P++ GDYN+ Q D NP A FT E R F L G Sbjct: 38 WDEKYAQYLAELDQKKPVLATGDYNVAHQEIDLANPNSNRRSAGFTDEERAGFTNLLAKG 97 Query: 191 FTDAIRATHDT-HHLYSFWDYYAD-SWSKNKGIRIDHIMLSPEATSLLHSAR-IDTKPRG 247 FTD R H ++YS+W + S N G RID+ + S + + ID+ R Sbjct: 98 FTDTFRHLHGNIPNVYSWWAQRSKTSKINNTGWRIDYWLTSNRIADKVTKSEMIDSGARQ 157 Query: 248 WTKPSDHTPVIVSLDI 263 DHTP+++ +D+ Sbjct: 158 -----DHTPILLEIDL 168 >gi|2981631|dbj|BAA25253.1| unnamed protein product [Canis lupus familiaris] Length = 1275 Score = 81.4 bits (199), Expect = 1e-13, Method: Composition-based stats. Identities = 61/282 (21%), Positives = 101/282 (35%), Gaps = 34/282 (12%) Query: 2 SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 S +++ T NVN + I ++ WIK+ +P I CLQET K+ ++ + Sbjct: 6 SYLSIVTLNVNGLNDPIKRRRVSDWIKKQDPSICCLQETHFRQKDTYSLKIKGWRTIYHS 65 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 G + GVAIL + D + +I +I + L I N+Y P+ Sbjct: 66 NGPQKKAGVAILISDKLKFTPK---TVVRDEEGHYIILKGSIQQEDLTILNIYAPNVGAA 122 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + L+ + GD+N+ D + E Sbjct: 123 KYINQ-----------LLTKVKKYLDNNTLILGDFNLALSILDRSSKHNISK------ET 165 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R L M FTD R H Y+F+ ++S RIDHI+ + Sbjct: 166 RALNDTLDQMDFTDIYRTLHPNSTEYTFFSSAHGTFS-----RIDHILGHQSGLNRYQKI 220 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 I SDH + + L+ +K + S + ++ I Sbjct: 221 GIVPCI-----FSDHNALKLELN--HNKKFGRTSNTWRLRTI 255 >gi|73963495|ref|XP_853568.1| PREDICTED: similar to LINE-1 reverse transcriptase homolog [Canis familiaris] Length = 1275 Score = 81.0 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 54/282 (19%), Positives = 93/282 (32%), Gaps = 34/282 (12%) Query: 2 SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 S +++ T NVN + I ++ WIK+ +P I CLQET K+ ++ + Sbjct: 6 SYLSIVTLNVNGLNDPIKRRRVSDWIKKQDPSICCLQETHFRQKDTYSLKIKGWRTIYHS 65 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 G + GVAIL + + + I Sbjct: 66 NGPQKKAGVAILISDKLKFTPK--------------TVVRDEEGHYIILKGSIQQEDLTI 111 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + + + + L+ + GD+N+ D + E Sbjct: 112 LNIYAPNVGAAKYINRLLTKVKKYLDNNTLILGDFNLALSILDRSSKQNISK------ET 165 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R L M FTD R H Y+F+ ++S RIDHI+ + Sbjct: 166 RALNDTLDQMDFTDIYRTLHPNSTEYTFFSSAHGTFS-----RIDHILGHKSGLNRYQKI 220 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 I SDH + + L+ +K + S + ++ I Sbjct: 221 GIVPCI-----FSDHNALKLELN--HNKKFGRTSNTWRLRTI 255 >gi|182412613|ref|YP_001817679.1| endonuclease/exonuclease/phosphatase [Opitutus terrae PB90-1] gi|177839827|gb|ACB74079.1| Endonuclease/exonuclease/phosphatase [Opitutus terrae PB90-1] Length = 808 Score = 81.0 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 52/291 (17%), Positives = 92/291 (31%), Gaps = 55/291 (18%) Query: 4 VTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQET-----KTEDKNFPFETLQSL 53 + + T+NV+ R +A I + PD++ LQE ++ ++ L Sbjct: 555 LRLMTYNVHGCSGMDGRVSPRRVARVIAAHGPDLVALQEIDLGRRRSRAEDQAALIAHQL 614 Query: 54 NYHIETCGQ----KSYNGVAILSKYQPIEIVT----HLPGDDLDVQARFIEATFTINTQT 105 H+ C + + G A+LS++ + H P + A I Sbjct: 615 GLHMVFCPTVTRGQEHYGHALLSRWPIEVVKRKLLPHDPRGWWKEPRAALWARVWIGDTP 674 Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165 + + +L G + + L +E ++ GD+N+ P Sbjct: 675 VHVVTTHLGLGRR------ERLLQMKMLLSPEWLGGLRDDERVVLCGDFNLTPG------ 722 Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225 + L DA A L +F +R+DH Sbjct: 723 ---------------SAPYGLMANRLQDAQAARDGHRPLSTFSSNRPF-------VRLDH 760 Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQ 276 I +SP + R+ SDH P+IV L + + TS Sbjct: 761 IFISPHF--RVQDVRVPRSELTRV-ASDHLPLIVDLALAPAAAETPTRTSP 808 >gi|92111129|gb|ABE73456.1| endonuclease/reverse transcriptase [Pan troglodytes] Length = 1275 Score = 81.0 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 62/279 (22%), Positives = 104/279 (37%), Gaps = 33/279 (11%) Query: 2 SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 S +T+ T NVN + + I LA+WIK +P + C+QET ++ ++ + Sbjct: 6 SHITILTLNVNGLNSPIKRHRLASWIKSQDPSVCCIQETHLTCRDTHRLKIKGWRKIYQA 65 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 G++ GVAIL + T D + +I +I + L I N+Y P+ Sbjct: 66 NGKQKRAGVAILVSDKTDFKPT---KIKRDKEGHYIMVKGSIQQEELTILNIYAPNTGAP 122 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K + + +L+ + GD+ P + N + Sbjct: 123 RFIKQ-----------VLSDLQRDLDSHTLIMGDFLNTPLSTLDRSTRQKVNK-----DT 166 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 ++ L D R H Y+F+ ++SK IDHI+ S S Sbjct: 167 QELNSALHQADLIDIYRTLHPKSTEYTFFSAPHHTYSK-----IDHILGSKALLSKCKRT 221 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278 I T SDH+ + + L I Q ST+ + Sbjct: 222 EIITNYL-----SDHSAIKLVLRI--KNLTQSCSTTWKL 253 >gi|224007765|ref|XP_002292842.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220971704|gb|EED90038.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 193 Score = 81.0 bits (198), Expect = 2e-13, Method: Composition-based stats. Identities = 36/161 (22%), Positives = 63/161 (39%), Gaps = 14/161 (8%) Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP--IIWE 170 G + Y + + ++P+I+ GD N+ D +N Sbjct: 35 PNSGQKLERLGYRTNSWDKDFLTKMQQLEKDGDKPIIWVGDLNVAFDEKDTWNEGAKHLA 94 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLS 229 A T E R SF + G+ DA R H YS+W A + NKG+R+D+ + S Sbjct: 95 KSAGTTAEERASFAEQLGAGYIDAFRHLHPEGRGHYSYWSQRAGNREPNKGLRLDYFVCS 154 Query: 230 PEA-------TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +++ + + G SDH P+++ ++I Sbjct: 155 KGIMGDGDGTKAIVRDSYMVPDQLG----SDHCPIVLEIEI 191 >gi|321479408|gb|EFX90364.1| hypothetical protein DAPPUDRAFT_309679 [Daphnia pulex] Length = 132 Score = 80.6 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 39/119 (32%), Positives = 61/119 (51%), Gaps = 6/119 (5%) Query: 142 LELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL-QNMGFTDAIRATHD 200 L+ ++P+I GD N+ Q D NP + +A FT E R F +L +++ TD R + Sbjct: 13 LDSKKPVIICGDMNVAHQEIDIANPKSNKRNAGFTQEERDGFSELLKSVNLTDGFRHKNP 72 Query: 201 T-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVI 258 Y+FW Y A++ KN G R+D+ +LS + +S + G SDH PV+ Sbjct: 73 DVKGAYTFWTYMANARKKNIGWRLDYCLLSEKLSSNFCDCCHRHEVYG----SDHCPVV 127 >gi|62085796|gb|AAX63289.1| DNA lyase [Beauveria bassiana] Length = 579 Score = 80.6 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 5/70 (7%) Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 D R H T +Y+ WD ++ N G RID+I+ S S + I G Sbjct: 228 WDICRCFHPTRLGMYTCWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQEGLMG--- 284 Query: 251 PSDHTPVIVS 260 SDH PV + Sbjct: 285 -SDHCPVYAT 293 Score = 40.9 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 10/60 (16%), Positives = 22/60 (36%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80 A DI+ +QETK + K+ + + + + + G + ++ Y Sbjct: 2 FQAMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATC 61 >gi|326789162|ref|YP_004306983.1| endonuclease/exonuclease/phosphatase [Clostridium lentocellum DSM 5427] gi|326539926|gb|ADZ81785.1| Endonuclease/exonuclease/phosphatase [Clostridium lentocellum DSM 5427] Length = 257 Score = 80.6 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 42/280 (15%), Positives = 79/280 (28%), Gaps = 43/280 (15%) Query: 4 VTVATWNV--NSI-------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 + V ++NV +SI R R + IK+ + D++ LQE D+ + Sbjct: 1 MKVMSFNVRADSILDVRNRWRHRSEIVYEVIKKYDCDVVGLQEV--TDRMYMDLNKAIDG 58 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 Y+I G+ + E + +T + Sbjct: 59 YYIIGKGRTKRY-------------------FNERNNLLVKEDYNLLEEETFWLSKTPSK 99 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG-----------DYNIIPQPHDC 163 G+ + + + + L + L + Sbjct: 100 TGSSVWYSMFPRICTTAVIQLANNLKIRIYNTHLDCLLPSAREYGLKKIGEYVGECYQKE 159 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223 P I D + + Q Q A D K +G+ I Sbjct: 160 KLPCILMGDFNAGPQSKLIQQFSQGSYSDKRFIAVQDVRKEIYNEATMGHFKGKTRGLHI 219 Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 D+I +S E + I + PSDH P++ +++ Sbjct: 220 DYIFVSEEFE--IKDVEIIKYQKNNKYPSDHYPILAEINL 257 >gi|66356394|ref|XP_625375.1| hypothetical protein [Cryptosporidium parvum Iowa II] gi|46226387|gb|EAK87392.1| conserved hypothetical protein [Cryptosporidium parvum Iowa II] Length = 500 Score = 80.6 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 36/115 (31%), Gaps = 10/115 (8%) Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 A + T++ Y+ W S +N+G RID ++S Sbjct: 286 KAYMHMRRMNIEMIKGYCLVDAYRHYYPRTNNKYTCWSQMNQSRIRNQGTRIDLFLISKG 345 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIV-----SLD-IPEPRKKQQDSTSQNMKP 280 S I G SDH P+++ + + K++ S P Sbjct: 346 LISESIKCEILDHIYG----SDHCPILLILKTGEFESLYNNEKRKPPSICSKYLP 396 >gi|325128862|gb|EGC51720.1| putative exodeoxyribonuclease [Neisseria meningitidis N1568] Length = 59 Score = 80.6 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 31/56 (55%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 + + TWNVNS+ R+ + + +N PDI+ LQE K + FP LQ + +H Sbjct: 1 MKITTWNVNSLNVRLPQVQNLLADNPPDILVLQELKLDQDKFPAAALQMMGWHCVW 56 >gi|331658475|ref|ZP_08359422.1| exodeoxyribonuclease III [Escherichia coli TA206] gi|331054411|gb|EGI26435.1| exodeoxyribonuclease III [Escherichia coli TA206] Length = 46 Score = 80.6 bits (197), Expect = 2e-13, Method: Composition-based stats. Identities = 18/44 (40%), Positives = 29/44 (65%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNF 45 + + ++N+N +RAR H L A ++++ PD+I LQETK D F Sbjct: 3 ATMKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMF 46 >gi|42476373|gb|AAS16530.1| exodeoxyribonuclease III [Neisseria gonorrhoeae] Length = 53 Score = 80.2 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 31/53 (58%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56 + + TWNVNS+ R+ + + +N PDI+ LQE K + FP LQ + +H Sbjct: 1 MKITTWNVNSLNVRLPQVQNLLADNPPDILVLQELKLDQDKFPAAALQMMGWH 53 >gi|39971027|ref|XP_366904.1| hypothetical protein MGG_02980 [Magnaporthe oryzae 70-15] gi|149210567|ref|XP_001522658.1| hypothetical protein MGCH7_ch7g758 [Magnaporthe oryzae 70-15] gi|86196713|gb|EAQ71351.1| hypothetical protein MGCH7_ch7g758 [Magnaporthe oryzae 70-15] gi|145017186|gb|EDK01549.1| hypothetical protein MGG_02980 [Magnaporthe oryzae 70-15] Length = 626 Score = 80.2 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 45/297 (15%), Positives = 84/297 (28%), Gaps = 63/297 (21%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN---YHIETCGQKSYNGVAILSKYQPI 77 + ++ DI+ +QE K + K+ + + Y +K Y+GVAI ++ Sbjct: 1 MFDILE---ADIVVIQEAKIQRKDLQDDMVLVPGWDVYFSLPKFKKGYSGVAIYTRSSKC 57 Query: 78 EIVTHLPGD--DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYD---------- 125 + G L + Q + + I D Sbjct: 58 SPIRAEEGITGILCPPNSTTKFRELSPDQQIGGYPRPDQLSDIIDEATLDSEGRCMILEF 117 Query: 126 --------------------DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165 + ++ K + + + ++ GD NII D Sbjct: 118 PAFVLIGVYSPATRDETRTDFRQAFHKAMDARVRNLVAMGKQVVLTGDLNIIRNELDTAG 177 Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTD---------------------AIRATHDTHHL 204 + T++ S + + D + Sbjct: 178 ILERLRKEEMTIDEFFSTPSRRFLNHMVFGGTVVGGRDEGREEPVMYDLGREFHPDRIGM 237 Query: 205 YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 Y+ W+ ++ N G RID+++ S A I G SDH PV +L Sbjct: 238 YTCWETRKNARPGNFGSRIDYVLCSAGMKDWFIDANIQEGLLG----SDHCPVYATL 290 >gi|325104253|ref|YP_004273907.1| Endonuclease/exonuclease/phosphatase [Pedobacter saltans DSM 12145] gi|324973101|gb|ADY52085.1| Endonuclease/exonuclease/phosphatase [Pedobacter saltans DSM 12145] Length = 276 Score = 80.2 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 47/281 (16%), Positives = 93/281 (33%), Gaps = 39/281 (13%) Query: 2 SVVTVATWNV-NSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETL----QSLN 54 + + ++N+ ++ + + D++ LQE +F ET Q L+ Sbjct: 14 RSLKILSYNILEGLKDKEKRALFVRLVDSLQADVLTLQEC----NHFTHETFLKFAQELS 69 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 Y ++ I+SKY + G ++ Y Sbjct: 70 YPYAVLLKEKGYPPGIISKYPIENVQRITEGF--------------LHGYISAEIAGYQF 115 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 + Y + + ++ +R Q + + +I ++ PQ YNP + D Sbjct: 116 VNLHLNPFMYVKRNAEMEAVIRHLDQLPKNSKTIIMGDFNSLSPQDSSYYNPNKQKLDKL 175 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYS-FWDYYADSW------------SKNKGI 221 E ++ + N G D + + Y+ W Y S + + Sbjct: 176 IAHEATRAHIQNVNNGGFDYSVISQLINKGYTDAWKYKNKSRFEKSAPSPVVKHDPDNDV 235 Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 RID+I +S S + S + SDH P+++ L Sbjct: 236 RIDYIWVSTPLKSKIKSVFMIKNK-HTDIISDHYPLVLVLK 275 >gi|66734174|gb|AAY53484.1| endonuclease reverse transcriptase [Bos taurus] Length = 1272 Score = 80.2 bits (196), Expect = 3e-13, Method: Composition-based stats. Identities = 59/283 (20%), Positives = 100/283 (35%), Gaps = 37/283 (13%) Query: 1 MSV---VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55 M+ ++V T NVN + A + LA WI++ +P I CLQET + + ++ Sbjct: 1 MATGTYLSVITLNVNGLNAPTKRQRLAEWIQKQDPYICCLQETHLKTGDTYRLKVKGWKK 60 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + GVAIL + I D + +I +I + + I N+Y P+ Sbjct: 61 IFHANRDQKKAGVAILISDK---IDFKTKAVKRDKEGHYIMIKGSIQEEEITIINIYAPN 117 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + S + E+ I GD+N P D Sbjct: 118 TGAPQYVRQ-----------MLTSMKGEINNNTIIVGDFNTPLTPMDRSTKQKINK---- 162 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E + + + D R+ H ++F+ ++S RIDHI+ + Sbjct: 163 --ETQTLNDTIDQLDLIDIYRSFHPKTMNFTFFSSAHGTFS-----RIDHILGHKASLGK 215 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278 I SDH V + L+ RK ++S + Sbjct: 216 FKKIEIIPSI-----FSDHNAVRLDLN--YRRKTIKNSNIWRL 251 >gi|218290200|ref|ZP_03494359.1| exodeoxyribonuclease III [Alicyclobacillus acidocaldarius LAA1] gi|218239795|gb|EED06985.1| exodeoxyribonuclease III [Alicyclobacillus acidocaldarius LAA1] Length = 58 Score = 79.8 bits (195), Expect = 3e-13, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 24/52 (46%), Gaps = 2/52 (3%) Query: 4 VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + +WNVN +RA + + + + D+ C+QETK + ++ Sbjct: 1 MRFVSWNVNGLRACVKKGAFLPYFESADADVFCIQETKLQAGQIELPIGEAY 52 >gi|148645276|gb|ABR01162.1| endonuclease/reverse transcriptase [Sus scrofa] Length = 1272 Score = 79.8 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 54/279 (19%), Positives = 95/279 (34%), Gaps = 34/279 (12%) Query: 2 SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 + +++ T NVN + A I +A WIK P I CLQET K+ ++ Sbjct: 5 NHLSIITLNVNGLNAPIKRHRVAEWIKRQKPSICCLQETHLRTKDTYRLKVKGWGKVFHA 64 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 GVA L + + D + ++ +I + + I N+Y P+ Sbjct: 65 NRHDRKAGVATLISDKIDFKTKDIKK---DKEGHYLMIKGSIQGEDVTIINIYAPNIGAP 121 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + + +++E I GD N D + E Sbjct: 122 RYIQQ-----------ILTDIKGDIDENTIIVGDLNTPLTSMDRSSRQKTNKATEILKET 170 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + + D R H Y+F+ ++S RIDHI+ + S Sbjct: 171 IEK------LDLIDIFRTLHPKKSEYTFFSNAHGTFS-----RIDHILGHKANLNKFRSI 219 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278 I + DH + L+I ++K++ T + Sbjct: 220 EIISSIFS-----DHNA--MKLEINHGKRKEKKPTPWRL 251 >gi|73974662|ref|XP_848463.1| PREDICTED: similar to LINE-1 reverse transcriptase homolog [Canis familiaris] Length = 1272 Score = 79.8 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 60/282 (21%), Positives = 100/282 (35%), Gaps = 34/282 (12%) Query: 2 SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 S +++ T NVN + I ++ WIK+ +P I CLQET + ++ + Sbjct: 5 SYLSIVTLNVNGLNDPIKRRRVSDWIKKQDPSICCLQETHFRQMDTYSLKMKDWRTIYHS 64 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 G + GVAIL + D + +I +I + L I N+Y P+ Sbjct: 65 NGPQKKAGVAILISDKLKFTPK---TVVRDEEGHYIILKGSIQQEDLTILNIYAPNVGTA 121 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + L+ + GD+N+ D + E Sbjct: 122 KYINQ-----------LLTKVKKYLDNNTLILGDFNLALSILDRSSKHNISK------ET 164 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R L M FTD R H Y+F+ ++S RIDHI+ + Sbjct: 165 RALNDTLDQMDFTDIYRTLHPNSTEYTFFSSAHGTFS-----RIDHILGHKSGLNRYQKI 219 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 I SDH + + L+ +K + S + ++ I Sbjct: 220 GIVPCI-----FSDHNALKLELN--HNKKFGRTSNTWRLRTI 254 >gi|39722391|emb|CAE84424.1| DNA lyase [Yarrowia lipolytica] Length = 412 Score = 79.8 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 38/97 (39%), Gaps = 6/97 (6%) Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 + + ++ + +Y+ W+ + N G RID+++ S + A I Sbjct: 92 FHRLVPDLLQDSCRNKHPNRPDMYTCWNVMMNYRPGNFGSRIDYVLASKGL--KVEDADI 149 Query: 242 DTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278 G SDH PV + P+ +++ + +Q Sbjct: 150 LPHLEG----SDHCPVYAEVREPDACQEKDNRATQGA 182 >gi|50548171|ref|XP_501555.1| YALI0C07436p [Yarrowia lipolytica] gi|49647422|emb|CAG81858.1| YALI0C07436p [Yarrowia lipolytica] Length = 582 Score = 79.8 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 38/97 (39%), Gaps = 6/97 (6%) Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 + + ++ + +Y+ W+ + N G RID+++ S + A I Sbjct: 262 FHRLVPDLLQDSCRNKHPNRPDMYTCWNVMMNYRPGNFGSRIDYVLASKGL--KVEDADI 319 Query: 242 DTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278 G SDH PV + P+ +++ + +Q Sbjct: 320 LPHLEG----SDHCPVYAEVREPDACQEKDNRATQGA 352 >gi|73981665|ref|XP_537277.2| PREDICTED: similar to reverse transcriptase isoform 1 [Canis familiaris] Length = 1150 Score = 79.8 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 61/282 (21%), Positives = 101/282 (35%), Gaps = 34/282 (12%) Query: 2 SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 S +++ T NVN + I ++ WIK+ +P I CLQET K+ ++ + Sbjct: 6 SYLSIVTLNVNGLNDPIKRRRVSDWIKKQDPSICCLQETHFRQKDTYSLKIKGWRTIYHS 65 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 G + GVAIL + D + +I +I + L I N+Y P+ Sbjct: 66 NGPQKKAGVAILISDKLKFTPK---TVVRDEEGHYIILKGSIQQEDLTILNIYAPNVGAA 122 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + L+ + GD+N+ D + E Sbjct: 123 KYINQ-----------LLTKVKKYLDNNTLILGDFNLALSILDRSSKQNISK------ET 165 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R L M FTD R H Y+F+ ++S RIDHI+ + Sbjct: 166 RALNDTLDQMDFTDIYRTLHPNSTEYTFFSSAHGTFS-----RIDHILGHKSGLNRYQKI 220 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 I SDH + + L+ +K + S + ++ I Sbjct: 221 GIVPCI-----FSDHNALKLELN--HNKKFGRTSNTWRLRTI 255 >gi|4335971|gb|AAD17542.1| APEX nuclease [Ateles belzebuth chamek] Length = 69 Score = 79.8 bits (195), Expect = 4e-13, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 1/46 (2%) Query: 2 SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFP 46 + + + +WNV+ +RA I W+KE PDI+CLQETK + P Sbjct: 24 ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLP 69 >gi|309798809|ref|ZP_07693073.1| exodeoxyribonuclease III [Streptococcus infantis SK1302] gi|308117626|gb|EFO55038.1| exodeoxyribonuclease III [Streptococcus infantis SK1302] Length = 217 Score = 79.4 bits (194), Expect = 4e-13, Method: Composition-based stats. Identities = 37/136 (27%), Positives = 60/136 (44%), Gaps = 8/136 (5%) Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG 190 +L+ ++ ++ GDYN+ + D NP FT E R+ F L G Sbjct: 87 WDVKYAEYLAQLDKQKSVLATGDYNVAHKEIDLANPASNRRSPGFTDEEREGFSNLLAKG 146 Query: 191 FTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIRIDHIMLSPEATSLLHSAR-IDTKPRG 247 FTD R H D Y++W + S N G RID+ + S + + ID+ R Sbjct: 147 FTDTFRHIHGDVPERYTWWAQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQ 206 Query: 248 WTKPSDHTPVIVSLDI 263 DHTP+++ +++ Sbjct: 207 -----DHTPIVMEIEL 217 >gi|111054099|gb|ABH04240.1| DNA lyase-like protein [Mycosphaerella fijiensis] Length = 622 Score = 79.4 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 29/73 (39%), Gaps = 4/73 (5%) Query: 190 GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT 249 + D +Y+ WD ++ N G RID +++S S + I G Sbjct: 252 FWDTTRIFHPDRKGMYTHWDTKVNARPGNFGSRIDFVLVSEALRSWVKYGNIQEGLLG-- 309 Query: 250 KPSDHTPVIVSLD 262 SDH PV + + Sbjct: 310 --SDHCPVYIDFE 320 Score = 42.5 bits (98), Expect = 0.073, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 28/82 (34%), Gaps = 14/82 (17%) Query: 10 NVNSIR----------AR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 NVN IR +R + ++ DI+ +QE K + K+ + + + Sbjct: 4 NVNGIRNPFSYPPWNVSRTFSAMFDILES---DIVVMQELKIQRKDLRDDMVLVDGWDCY 60 Query: 59 TCGQKSYNGVAILSKYQPIEIV 80 K G + + Y Sbjct: 61 FSLPKHKKGYSGVGIYTRNATC 82 >gi|45198534|ref|NP_985563.1| AFR016Wp [Ashbya gossypii ATCC 10895] gi|44984485|gb|AAS53387.1| AFR016Wp [Ashbya gossypii ATCC 10895] Length = 558 Score = 79.4 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 4/84 (4%) Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPS 252 +Y+ WD Y +S N G R+D+I++S + A I K G S Sbjct: 320 TRYAQGRKRLKMYTVWDTYRNSRPANYGSRVDYILVSKALKEGVKKADIWAKVMG----S 375 Query: 253 DHTPVIVSLDIPEPRKKQQDSTSQ 276 DH PV L I E + T++ Sbjct: 376 DHCPVFTDLQIEEEDTVALEETTK 399 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 29/87 (33%), Gaps = 16/87 (18%) Query: 4 VTVATWNVNSIRA------------RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51 + T+NVN +R + + + K D+I QE KT+ P + Sbjct: 42 LRFVTFNVNGLRTLFGHYPFSRMSNSLAQVFEYFKS---DVITFQELKTDKLAIPRWGMV 98 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIE 78 Y+ G + + + I Sbjct: 99 D-GYYSFITIPSKKKGYSGVGCWIRIP 124 >gi|325068217|ref|ZP_08126890.1| putative exodeoxyribonuclease III [Actinomyces oris K20] Length = 77 Score = 79.4 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 4/61 (6%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +AT NVN IRA + W+ + PDI+ LQE + D+ + L Y Sbjct: 1 MRIATVNVNGIRAAARKGMGEWLAASAPDILLLQEVRA-DEQIAVDLLP--GYEAAIWPC 57 Query: 63 K 63 + Sbjct: 58 R 58 >gi|323349886|gb|EGA84099.1| Apn2p [Saccharomyces cerevisiae Lalvin QA23] Length = 455 Score = 79.4 bits (194), Expect = 5e-13, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 6/78 (7%) Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 +Y+ W+ + N G RID I++S + + +A I G SDH PV LD Sbjct: 307 KMYTVWNMLKNLRPSNYGSRIDFILVSLKLERCIKTADILPDILG----SDHCPVYSDLD 362 Query: 263 IPEPRKKQQDSTSQNMKP 280 I + + T+Q P Sbjct: 363 I--VDDRIEPGTTQVAIP 378 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 39/138 (28%), Gaps = 17/138 (12%) Query: 2 SVVTVATWNVNSIRA------------RIHNLAAWIKENNPDIICLQETKTEDKNFPFET 49 + + T+NVN IR + ++ + + DII QE KTE + Sbjct: 15 NTIRFLTFNVNGIRTFFHYQPFSQMNQSLRSVFDFFR---ADIITFQELKTEKLSISKWG 71 Query: 50 LQSLNYHIETCGQKS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107 Y + Q Y+GV + + + + N + Sbjct: 72 RVDGFYSFISIPQNRKGYSGVGCWIRIXEKNHPLYHALQVVKAEEGITGYLTIKNGKHSA 131 Query: 108 IGNLYLPHGNPITSTKYD 125 I + D Sbjct: 132 ISYRNDVNQGIGGYDSLD 149 >gi|256269259|gb|EEU04581.1| Apn2p [Saccharomyces cerevisiae JAY291] gi|259144827|emb|CAY77766.1| Apn2p [Saccharomyces cerevisiae EC1118] Length = 520 Score = 79.4 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 6/78 (7%) Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 +Y+ W+ + N G RID I++S + + +A I G SDH PV LD Sbjct: 307 KMYTVWNMLKNLRPSNYGSRIDFILVSLKLERCIKTADILPDILG----SDHCPVYSDLD 362 Query: 263 IPEPRKKQQDSTSQNMKP 280 I + + T+Q P Sbjct: 363 I--VDDRIEPGTTQVAIP 378 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 39/138 (28%), Gaps = 17/138 (12%) Query: 2 SVVTVATWNVNSIRA------------RIHNLAAWIKENNPDIICLQETKTEDKNFPFET 49 + + T+NVN IR + ++ + + DII QE KTE + Sbjct: 15 NTIRFLTFNVNGIRTFFHYQPFSQMNQSLRSVFDFFR---ADIITFQELKTEKLSISKWG 71 Query: 50 LQSLNYHIETCGQKS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107 Y + Q Y+GV + + + + N + Sbjct: 72 RVDGFYSFISIPQNRKGYSGVGCWIRIPEKNHPLYHALQVVKAEEGITGYLTIKNGKHSA 131 Query: 108 IGNLYLPHGNPITSTKYD 125 I + D Sbjct: 132 ISYRNDVNQGIGGYDSLD 149 >gi|323356266|gb|EGA88070.1| Apn2p [Saccharomyces cerevisiae VL3] Length = 520 Score = 79.4 bits (194), Expect = 6e-13, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 6/78 (7%) Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 +Y+ W+ + N G RID I++S + + +A I G SDH PV LD Sbjct: 307 KMYTVWNMLKNLRPSNYGSRIDFILVSLKLERCIKTADILPDILG----SDHCPVYSDLD 362 Query: 263 IPEPRKKQQDSTSQNMKP 280 I + + T+Q P Sbjct: 363 I--VDDRIEPGTTQVAIP 378 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 39/138 (28%), Gaps = 17/138 (12%) Query: 2 SVVTVATWNVNSIRA------------RIHNLAAWIKENNPDIICLQETKTEDKNFPFET 49 + + T+NVN IR + ++ + + DII QE KTE + Sbjct: 15 NTIRFLTFNVNGIRTFFHYQPFSQMNQSLRSVFDFFR---ADIITFQELKTEKLSISKWG 71 Query: 50 LQSLNYHIETCGQKS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107 Y + Q Y+GV + + + + N + Sbjct: 72 RVDGFYSFISIPQXRKGYSGVGCWIRIPEKNHPLYHALQVVKAEEGITGYLTIKNGKHSA 131 Query: 108 IGNLYLPHGNPITSTKYD 125 I + D Sbjct: 132 ISYRNDVNQGIGGYDSLD 149 >gi|224086920|ref|XP_002308005.1| predicted protein [Populus trichocarpa] gi|222853981|gb|EEE91528.1| predicted protein [Populus trichocarpa] Length = 331 Score = 79.1 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 25/98 (25%), Positives = 38/98 (38%), Gaps = 13/98 (13%) Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK-------GIRIDH 225 AC E + + GF DA R H Y++W Y NK G R+D+ Sbjct: 238 ACTEEERKSFGSNFLSNGFVDAFRKQHPNVVGYTYWGYRHGGRKTNKVVLKFETGWRLDY 297 Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPV--IVSL 261 ++S +H + I G DH P+ ++ L Sbjct: 298 FLVSESIADNVHDSYIVPAVTGG----DHCPLRPVLEL 331 >gi|323338805|gb|EGA80020.1| Apn2p [Saccharomyces cerevisiae Vin13] Length = 317 Score = 79.1 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 6/78 (7%) Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 +Y+ W+ + N G RID I++S + + +A I G SDH PV LD Sbjct: 182 KMYTVWNMLKNLRPSNYGSRIDFILVSLKLERCIKTADILPDILG----SDHCPVYSDLD 237 Query: 263 IPEPRKKQQDSTSQNMKP 280 I + + T+Q P Sbjct: 238 I--VDDRIEPGTTQVAIP 253 >gi|148675568|gb|EDL07515.1| apurinic/apyrimidinic endonuclease 2, isoform CRA_c [Mus musculus] Length = 543 Score = 79.1 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 34/200 (17%), Positives = 62/200 (31%), Gaps = 18/200 (9%) Query: 93 RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG 152 + T +TL + N+Y PH +P + K+ + + A L +I G Sbjct: 163 QHKIRTLEGKEKTLTLINVYCPHADPGKPERLTFKMRFYRLLQMRAEALLAAGSHVIILG 222 Query: 153 DYNIIPQPHDCY-----------NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT 201 D N +P D W + M + Sbjct: 223 DLNTAHRPIDHCDASSLECFEEDPGRKWMDGLLSNPGDEAGPHIGLFMDSYRYL--HPKQ 280 Query: 202 HHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT-SLLHSARIDTKPRGWTKPSDHTPVIVS 260 ++ W + + N G R+D+++ ++ + + G SDH PV Sbjct: 281 QRAFTCWSVVSGARHLNYGSRLDYVLGDRALVIDTFQASFLLPEVMG----SDHCPVGAV 336 Query: 261 LDIPEPRKKQQDSTSQNMKP 280 L++ KQ + P Sbjct: 337 LNVSCVPAKQCPALCTRFLP 356 >gi|148675567|gb|EDL07514.1| apurinic/apyrimidinic endonuclease 2, isoform CRA_b [Mus musculus] Length = 402 Score = 79.1 bits (193), Expect = 6e-13, Method: Composition-based stats. Identities = 34/200 (17%), Positives = 62/200 (31%), Gaps = 18/200 (9%) Query: 93 RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG 152 + T +TL + N+Y PH +P + K+ + + A L +I G Sbjct: 22 QHKIRTLEGKEKTLTLINVYCPHADPGKPERLTFKMRFYRLLQMRAEALLAAGSHVIILG 81 Query: 153 DYNIIPQPHDCY-----------NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT 201 D N +P D W + M + Sbjct: 82 DLNTAHRPIDHCDASSLECFEEDPGRKWMDGLLSNPGDEAGPHIGLFMDSYRYL--HPKQ 139 Query: 202 HHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT-SLLHSARIDTKPRGWTKPSDHTPVIVS 260 ++ W + + N G R+D+++ ++ + + G SDH PV Sbjct: 140 QRAFTCWSVVSGARHLNYGSRLDYVLGDRALVIDTFQASFLLPEVMG----SDHCPVGAV 195 Query: 261 LDIPEPRKKQQDSTSQNMKP 280 L++ KQ + P Sbjct: 196 LNVSCVPAKQCPALCTRFLP 215 >gi|149031346|gb|EDL86344.1| rCG38932, isoform CRA_b [Rattus norvegicus] Length = 346 Score = 79.1 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 18/137 (13%), Positives = 39/137 (28%), Gaps = 9/137 (6%) Query: 145 EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL 204 P+ ++ D + + E + Sbjct: 31 HRPIDHCDASSLECFEEDPGRKWMDGLLSNPGNEAGPHIGHFMDSFRY----FHPKQQRA 86 Query: 205 YSFWDYYADSWSKNKGIRIDHIMLSPEAT-SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 ++ W + + N G R+D+++ ++ + + G SDH PV L++ Sbjct: 87 FTCWSVVSGARHLNYGSRLDYVLGDRSLVIDTFQASFLLPEVMG----SDHCPVGAVLNV 142 Query: 264 PEPRKKQQDSTSQNMKP 280 KQ + P Sbjct: 143 SCVPAKQCPALCTRFLP 159 >gi|302669280|ref|YP_003832430.1| exodeoxyribonuclease III Xth [Butyrivibrio proteoclasticus B316] gi|302396944|gb|ADL35848.1| exodeoxyribonuclease III Xth [Butyrivibrio proteoclasticus B316] Length = 216 Score = 79.1 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 46/216 (21%), Positives = 80/216 (37%), Gaps = 10/216 (4%) Query: 51 QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 Y + + + I++V P T+ Sbjct: 8 HDYVYVSSREPARKGYAGTMALYKRDIKVVASFPEIGAPDTMDSEGRMITLEHDKFFFNL 67 Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170 +Y P+ + + ++ + L+ +P+I GDYN+ + D NP Sbjct: 68 VYTPNAGDGLKRLKERQEWDVQ--YTKYLKSLDEVKPVISCGDYNVAHEEIDLANPDSNH 125 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIRIDHIML 228 A FT E R F L + GF D R H D ++YS+W S N G RID+ ++ Sbjct: 126 MSAGFTDEERAGFTNLLSAGFVDTFRHVHGDIPNVYSWWAQRIKTSKINNSGWRIDYFLV 185 Query: 229 SPEATSLLHSARI-DTKPRGWTKPSDHTPVIVSLDI 263 S + + + D+ R DHTP+ + +++ Sbjct: 186 SDRIKDKVTRSDMLDSGARQ-----DHTPIALEIEL 216 >gi|73975969|ref|XP_537276.2| PREDICTED: similar to LINE-1 reverse transcriptase homolog isoform 1 [Canis familiaris] Length = 1273 Score = 79.1 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 61/282 (21%), Positives = 101/282 (35%), Gaps = 36/282 (12%) Query: 2 SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 S +++ T NVN + I ++ WIK+ +P I CLQET K+ ++ + Sbjct: 6 SYLSIVTLNVNGLNDPIKRRRVSDWIKKQDPSICCLQETHFRQKDTYSLKIKGWRTIYHS 65 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 G + GVAIL + D + +I +I + L I N+Y P+ Sbjct: 66 NGPQKKAGVAILISDKLKFTPK---TVVRDEEGHYIILKGSIQQEDLTILNIYAPNVGAA 122 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + L+ + GD+N+ D + E Sbjct: 123 KYINQ-----------LLTKVKKYLDNNTLILGDFNLALSILDRSSKHNISK------ET 165 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R L M FTD R H Y+F+ ++S RIDHI+ + Sbjct: 166 RALNDTLDQMDFTDIYRTLHPNSTEYTFFS--HGTFS-----RIDHILGHKSGLNRYQKI 218 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 I SDH + + L+ +K + S + ++ I Sbjct: 219 GIVPCI-----FSDHNALKLELN--HNKKFGRTSNTWRLRTI 253 >gi|115402641|ref|XP_001217397.1| hypothetical protein ATEG_08811 [Aspergillus terreus NIH2624] gi|114189243|gb|EAU30943.1| hypothetical protein ATEG_08811 [Aspergillus terreus NIH2624] Length = 592 Score = 79.1 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 27/72 (37%), Gaps = 4/72 (5%) Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 D +Y+ W+ ++ N G RID+++ S + + + I G Sbjct: 225 HDICRMFHPDRKGMYTCWEQRINARPGNYGSRIDYVLCSLDMRDWIEDSNIQEGLMG--- 281 Query: 251 PSDHTPVIVSLD 262 SDH PV Sbjct: 282 -SDHCPVYAIFK 292 Score = 37.8 bits (86), Expect = 1.8, Method: Composition-based stats. Identities = 7/35 (20%), Positives = 14/35 (40%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 + DI+ QETK + K+ + + + Sbjct: 2 FEILEADIVVFQETKIQRKDLRDDMVLVPGWDCYF 36 >gi|74008029|ref|XP_851237.1| PREDICTED: similar to LINE-1 reverse transcriptase homolog [Canis familiaris] Length = 1275 Score = 79.1 bits (193), Expect = 7e-13, Method: Composition-based stats. Identities = 59/282 (20%), Positives = 97/282 (34%), Gaps = 34/282 (12%) Query: 2 SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 S +++ T NVN + I ++ WIK+ +P I CLQET K+ ++ Sbjct: 6 SYLSIVTLNVNGLNDPIKRRRVSDWIKKQDPSICCLQETHFRQKDTYSLKIKGWRTIYHL 65 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 G + GVAIL + D + +I +I + L I N+Y P+ Sbjct: 66 NGPQKKAGVAILISDKLKFTPK---TVVRDEEGHYIILKGSIQQEDLTILNIYAPNVGAA 122 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + L+ + GD+N+ D + Sbjct: 123 KYINQ-----------LLTKVKKYLDNNTLILGDFNLALSILDRSSKHNISKKTR----- 166 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 L M FTD R H Y+F+ ++S RIDHI + Sbjct: 167 -ALNDTLDQMDFTDIERTLHPNSTEYTFFSSAHGTFS-----RIDHIFGHKSGLNRYQKI 220 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 I SDH + + L+ +K + S + ++ I Sbjct: 221 GIVPCI-----FSDHNALKLELN--HNKKFGRTSNTWRLRTI 255 >gi|207347830|gb|EDZ73883.1| YBL019Wp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 442 Score = 78.7 bits (192), Expect = 8e-13, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 6/78 (7%) Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 +Y+ W+ + N G RID I++S + + +A I G SDH PV LD Sbjct: 307 KMYTVWNMLKNLRPSNYGSRIDFILVSLKLERCIKTADILPDILG----SDHCPVYSDLD 362 Query: 263 IPEPRKKQQDSTSQNMKP 280 I + + T+Q P Sbjct: 363 I--VDDRIEPGTTQVAIP 378 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 39/138 (28%), Gaps = 17/138 (12%) Query: 2 SVVTVATWNVNSIRA------------RIHNLAAWIKENNPDIICLQETKTEDKNFPFET 49 + + T+NVN IR + ++ + + DII QE KTE + Sbjct: 15 NTIRFLTFNVNGIRTFFHYQPFSQMNQSLRSVFDFFR---ADIITFQELKTEKLSISKWG 71 Query: 50 LQSLNYHIETCGQKS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107 Y + Q Y+GV + + + + N + Sbjct: 72 RVDGFYSFISIPQNRKGYSGVGCWIRIPEKNHPLYHALQVVKAEEGITGYLTIKNGKHSA 131 Query: 108 IGNLYLPHGNPITSTKYD 125 I + D Sbjct: 132 ISYRNDVNQGIGGYDSLD 149 >gi|323306058|gb|EGA59792.1| Apn2p [Saccharomyces cerevisiae FostersB] Length = 404 Score = 78.7 bits (192), Expect = 8e-13, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 6/78 (7%) Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 +Y+ W+ + N G RID I++S + + +A I G SDH PV LD Sbjct: 269 KMYTVWNMLKNLRPSNYGSRIDFILVSLKLERCIKTADILPDILG----SDHCPVYSDLD 324 Query: 263 IPEPRKKQQDSTSQNMKP 280 I + + T+Q P Sbjct: 325 I--VDDRIEPGTTQVAIP 340 >gi|281346976|gb|EFB22560.1| hypothetical protein PANDA_001632 [Ailuropoda melanoleuca] Length = 350 Score = 78.7 bits (192), Expect = 8e-13, Method: Composition-based stats. Identities = 48/272 (17%), Positives = 85/272 (31%), Gaps = 34/272 (12%) Query: 12 NSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVA 69 N + + I +A WIK ++P I CLQET E K+ ++ + G + GVA Sbjct: 2 NGLNSPIKRHRVADWIKRHDPSICCLQETHFEPKDAFRLRVRGWSTIFHANGPQKKAGVA 61 Query: 70 ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKIS 129 IL + + + + I + ++ + Sbjct: 62 ILISDRLDF--------------KLEAIERDTEGHYIILKGSIQQVDMTIINIYAPNRGA 107 Query: 130 WIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNM 189 + +++ + GD N D E + L + Sbjct: 108 ARYTSQLLTKIKRHIDKNTVIVGDLNTPLSEIDRTPWQKLSK------ESKALNAILDEL 161 Query: 190 GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT 249 D R H YSF+ ++S RIDH + S I Sbjct: 162 DLIDIYRTLHPRTKEYSFYSNAHGTFS-----RIDHALGHKTGLSQYQKIEIIPCI---- 212 Query: 250 KPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 SDH + + L+ K ++S + ++ I Sbjct: 213 -FSDHNALKLELN--HKEKPGRNSNTWRLRTI 241 >gi|281347163|gb|EFB22747.1| hypothetical protein PANDA_014986 [Ailuropoda melanoleuca] Length = 349 Score = 78.7 bits (192), Expect = 9e-13, Method: Composition-based stats. Identities = 48/272 (17%), Positives = 85/272 (31%), Gaps = 34/272 (12%) Query: 12 NSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVA 69 N + + I +A WIK ++P I CLQET E K+ ++ + G + GVA Sbjct: 1 NGLNSPIKRHRVADWIKRHDPSICCLQETHFEPKDAFRLRVRGWSTIFHANGPQKKAGVA 60 Query: 70 ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKIS 129 IL + + + + I + ++ + Sbjct: 61 ILISDRLDF--------------KLEAIERDTEGHYIILKGSIQQVDMTIINIYAPNRGA 106 Query: 130 WIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNM 189 + +++ + GD N D E + L + Sbjct: 107 ARYTSQLLTKIKRHIDKNTVIVGDLNTPLSEIDRTPWQKLSK------ESKALNAILDEL 160 Query: 190 GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT 249 D R H YSF+ ++S RIDH + S I Sbjct: 161 DLIDIYRTLHPRTKEYSFYSNAHGTFS-----RIDHALGHKTGLSQYQKIEIIPCI---- 211 Query: 250 KPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 SDH + + L+ K ++S + ++ I Sbjct: 212 -FSDHNALKLELN--HKEKPGRNSNTWRLRTI 240 >gi|151946376|gb|EDN64598.1| AP endonuclease [Saccharomyces cerevisiae YJM789] Length = 520 Score = 78.7 bits (192), Expect = 9e-13, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 6/78 (7%) Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 +Y+ W+ + N G RID I++S + + +A I G SDH PV LD Sbjct: 307 KMYTVWNMLKNLRPSNYGSRIDFILVSLKLERCIKAADILPDILG----SDHCPVYSDLD 362 Query: 263 IPEPRKKQQDSTSQNMKP 280 I + + T+Q P Sbjct: 363 I--LDDRIEPGTTQVAIP 378 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 39/138 (28%), Gaps = 17/138 (12%) Query: 2 SVVTVATWNVNSIRA------------RIHNLAAWIKENNPDIICLQETKTEDKNFPFET 49 + + T+NVN IR + ++ + + DII QE KTE + Sbjct: 15 NTIRFLTFNVNGIRTFFHYQPFSQMNQSLRSVFDFFR---ADIITFQELKTEKLSISKWG 71 Query: 50 LQSLNYHIETCGQKS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107 Y + Q Y+GV + + + + N + Sbjct: 72 RVDGFYSFISIPQTRKGYSGVGCWIRIPEKNHPLYHALQVVKAEEGITGYLTIKNGKHSA 131 Query: 108 IGNLYLPHGNPITSTKYD 125 I + D Sbjct: 132 ISYRNDVNQGIGGYDSLD 149 >gi|327349957|gb|EGE78814.1| DNA lyase Apn2 [Ajellomyces dermatitidis ATCC 18188] Length = 642 Score = 78.3 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 27/69 (39%), Gaps = 4/69 (5%) Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253 + D +Y+ W+ ++ N G RID+++ ++ I G SD Sbjct: 263 CRKYHPDRPGMYTCWEQRVNARPGNYGSRIDYVLCDKRMEDWFSASNIQEGLMG----SD 318 Query: 254 HTPVIVSLD 262 H PV L Sbjct: 319 HCPVFADLK 327 Score = 65.2 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 11/90 (12%) Query: 3 VVTVATWNVNSIRA-------RIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 +V + TWNVN IR R A + DI+ QETK + K+ + + Sbjct: 1 MVRLTTWNVNGIRNPFSYHPWREKRSFEAMFDALDADIVIFQETKIQKKDLQDDMVLVNG 60 Query: 55 YHIET---CGQKSYNGVAILSKYQPIEIVT 81 + +K Y+GV I ++ + Sbjct: 61 WDCFFSLPKYKKGYSGVVIYTRNSKCCPIR 90 >gi|239613861|gb|EEQ90848.1| DNA lyase Apn2 [Ajellomyces dermatitidis ER-3] Length = 633 Score = 78.3 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 27/69 (39%), Gaps = 4/69 (5%) Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253 + D +Y+ W+ ++ N G RID+++ ++ I G SD Sbjct: 254 CRKYHPDRPGMYTCWEQRVNARPGNYGSRIDYVLCDKRMEDWFSASNIQEGLMG----SD 309 Query: 254 HTPVIVSLD 262 H PV L Sbjct: 310 HCPVFADLK 318 Score = 42.5 bits (98), Expect = 0.072, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 16/42 (38%) Query: 18 IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 + A + DI+ QETK + K+ + + + Sbjct: 28 KRSFEAMFDALDADIVIFQETKIQKKDLQDDMVLVNGWDCFF 69 >gi|255719916|ref|XP_002556238.1| KLTH0H08250p [Lachancea thermotolerans] gi|238942204|emb|CAR30376.1| KLTH0H08250p [Lachancea thermotolerans] Length = 512 Score = 78.3 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 4/71 (5%) Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPS 252 D +Y+ W+ +S N G RID+I+ + + L A I K G S Sbjct: 290 TRYIQGRDRMKMYTVWNTLRNSRPVNYGSRIDYILATAGLKNDLKKADIWPKIMG----S 345 Query: 253 DHTPVIVSLDI 263 DH PV + + Sbjct: 346 DHCPVFADIQL 356 Score = 40.5 bits (93), Expect = 0.23, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 20/50 (40%), Gaps = 15/50 (30%) Query: 4 VTVATWNVNSIRARIH------------NLAAWIKENNPDIICLQETKTE 41 V T+NVN IR H + + + DII QE KT+ Sbjct: 12 VRFLTFNVNGIRTLFHYHPFSSMNSSLSRVFEYFQS---DIITFQELKTD 58 >gi|261193611|ref|XP_002623211.1| DNA lyase Apn2 [Ajellomyces dermatitidis SLH14081] gi|239588816|gb|EEQ71459.1| DNA lyase Apn2 [Ajellomyces dermatitidis SLH14081] Length = 629 Score = 78.3 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 27/69 (39%), Gaps = 4/69 (5%) Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253 + D +Y+ W+ ++ N G RID+++ ++ I G SD Sbjct: 250 CRKYHPDRPGMYTCWEQRVNARPGNYGSRIDYVLCDKRMEDWFSASNIQEGLMG----SD 305 Query: 254 HTPVIVSLD 262 H PV L Sbjct: 306 HCPVFADLK 314 Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 8/65 (12%) Query: 3 VVTVATWNVNSIRA-------RIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 +V + TWNVN IR R A + DI+ QETK + K+ + + Sbjct: 1 MVRLTTWNVNGIRNPFSYHPWREKRSFEAMFDALDADIVIFQETKIQKKDLQDDMVLVNG 60 Query: 55 YHIET 59 + Sbjct: 61 WDCFF 65 >gi|47077039|dbj|BAD18453.1| unnamed protein product [Homo sapiens] Length = 264 Score = 78.3 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 53/264 (20%), Positives = 84/264 (31%), Gaps = 32/264 (12%) Query: 2 SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 S +T+ T NVN + I LA+WIK +P + C+QET K+ ++ + Sbjct: 6 SHITILTLNVNGLNTPIKRHRLASWIKSQDPSVCCIQETHLICKDAYRLKIKGWRKIYQA 65 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 ++ GVAIL + T + + I Sbjct: 66 NRKQKKAGVAILVSDKSDFKPTK--------------IKRDKKGHYIMVKGSMQQEELTI 111 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + + + + L+ I GD+N D D Sbjct: 112 LNIYAPNTGAPRFINEVLRDPQRNLDSHTIIMGDFNTPLSIFDRSTRQKVNKDT------ 165 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + LQ D R H Y+F+ ++SK DHI+ S S Sbjct: 166 QDLNLTLQQADLRDIYRTLHPKSTEYTFFSALHHTYSKT-----DHILGSKALLSKCKRT 220 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263 I T SDH+ + + L I Sbjct: 221 EITTNCL-----SDHSAIKLELRI 239 >gi|171676121|ref|XP_001903014.1| hypothetical protein [Podospora anserina S mat+] gi|170936126|emb|CAP60786.1| unnamed protein product [Podospora anserina S mat+] Length = 645 Score = 78.3 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 25/70 (35%), Gaps = 4/70 (5%) Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 + +Y+ WD + N G RID+++ S A I G Sbjct: 255 WDLCREFHPTRTGMYTCWDTRKNCRPGNFGSRIDYVLCSSGIKDWFIDANIQEGLLG--- 311 Query: 251 PSDHTPVIVS 260 SDH PV + Sbjct: 312 -SDHCPVYAT 320 Score = 37.8 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 27/68 (39%), Gaps = 7/68 (10%) Query: 13 SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILS 72 SIRA + ++ DI+ +QE K + K+ + + + + K G + ++ Sbjct: 28 SIRA----MFDTLE---ADIVVVQEAKIQRKDLQDDMVLIPGWDVYFSLPKHKKGYSGVA 80 Query: 73 KYQPIEIV 80 Y Sbjct: 81 IYTRSSKC 88 >gi|29420515|dbj|BAC66501.1| DNA lyase [Cordyceps militaris] Length = 624 Score = 78.3 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 5/70 (7%) Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 D R H +++ WD ++ N G RID+I+ S + + I G Sbjct: 246 WDICRCFHPRRVGMHTCWDTKRNTRPANVGSRIDYILCSDGIKDWIVDSNIQEGLMG--- 302 Query: 251 PSDHTPVIVS 260 SDH PV + Sbjct: 303 -SDHCPVYAT 311 Score = 42.1 bits (97), Expect = 0.094, Method: Composition-based stats. Identities = 11/65 (16%), Positives = 23/65 (35%), Gaps = 1/65 (1%) Query: 17 RIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75 R A DI+ +QETK + K+ + + + + + G + ++ Y Sbjct: 15 REKRTFQAMFDILEADIVVMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYT 74 Query: 76 PIEIV 80 Sbjct: 75 RNATC 79 >gi|323310178|gb|EGA63370.1| Apn2p [Saccharomyces cerevisiae FostersO] Length = 442 Score = 78.3 bits (191), Expect = 1e-12, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 6/78 (7%) Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 +Y+ W+ + N G RID I++S + + +A I G SDH PV LD Sbjct: 307 KMYTVWNMLKNLRPSNYGSRIDFILVSLKLERCIKTADILPDILG----SDHCPVYSDLD 362 Query: 263 IPEPRKKQQDSTSQNMKP 280 I + + T+ P Sbjct: 363 I--VDDRIEPGTTXVAIP 378 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 39/138 (28%), Gaps = 17/138 (12%) Query: 2 SVVTVATWNVNSIRA------------RIHNLAAWIKENNPDIICLQETKTEDKNFPFET 49 + + T+NVN IR + ++ + + DII QE KTE + Sbjct: 15 NTIRFLTFNVNGIRTFFHYQPFSQMNQSLRSVFDFFR---ADIITFQELKTEKLSISKWG 71 Query: 50 LQSLNYHIETCGQKS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107 Y + Q Y+GV + + + + N + Sbjct: 72 RVDGFYSFISIPQTRKGYSGVGCWIRIPEKNHPLYHALQVVKAEEGITGYLTIKNGKHSA 131 Query: 108 IGNLYLPHGNPITSTKYD 125 I + D Sbjct: 132 ISYRNDVNQGIGGYDSLD 149 >gi|156838338|ref|XP_001642876.1| hypothetical protein Kpol_1007p2 [Vanderwaltozyma polyspora DSM 70294] gi|156113453|gb|EDO15018.1| hypothetical protein Kpol_1007p2 [Vanderwaltozyma polyspora DSM 70294] Length = 529 Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 4/70 (5%) Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPS 252 T +Y+ W+ ++ N G RID I+LS E + A I G S Sbjct: 296 TRYVQTKKRLKMYTVWNTLKNTRPVNYGSRIDFILLSKELQDYILQADILPDVMG----S 351 Query: 253 DHTPVIVSLD 262 DH PV + +D Sbjct: 352 DHCPVYLDID 361 Score = 45.2 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 17/79 (21%), Positives = 28/79 (35%), Gaps = 11/79 (13%) Query: 4 VTVATWNVNSIRARIH-----NLAAWIKEN----NPDIICLQETKTEDKNFPFETLQSLN 54 + ++NVN +R H + +K + + D+I QE KTE Sbjct: 16 IRFVSFNVNGVRTLFHYQPFSQMNQSLKASFEYFDADVITFQELKTEKYGISKWGKVDDF 75 Query: 55 YHIETCGQKS--YNGVAIL 71 Y + Y+GV Sbjct: 76 YSFISIPSNKKGYSGVGCW 94 >gi|47206818|emb|CAF91198.1| unnamed protein product [Tetraodon nigroviridis] Length = 506 Score = 77.9 bits (190), Expect = 1e-12, Method: Composition-based stats. Identities = 21/96 (21%), Positives = 29/96 (30%), Gaps = 6/96 (6%) Query: 187 QNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT-SLLHSARIDTK 244 F D R H + ++ W + N G RID+I +A I + Sbjct: 184 HGGKFVDTFRYFHPTRANAFTCWSTLTGARQTNYGTRIDYIFADHRLASEQFVAADIMPE 243 Query: 245 PRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 G SDH PV L + P Sbjct: 244 VEG----SDHCPVWGQLSCSLVPSTKPPPLCTRYLP 275 >gi|255561291|ref|XP_002521656.1| ap endonuclease, putative [Ricinus communis] gi|223539047|gb|EEF40643.1| ap endonuclease, putative [Ricinus communis] Length = 586 Score = 77.9 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 40/213 (18%), Positives = 63/213 (29%), Gaps = 29/213 (13%) Query: 98 TFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII 157 + + NLY P + + K+ + + L+ + GD NI Sbjct: 109 CIITDHGHFVLFNLYGPRAESDDTERIHFKLLFYNILQKRWESLLQQGRRIFVVGDLNIA 168 Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK 217 P D + F + R K F D Y+ W + Sbjct: 169 PTAMDRCDADPDFEKNEFRIWFRSMLVKSGGPFFDVFRSKHPDRREAYTCWPSNTGAEQF 228 Query: 218 NKGIRIDHIM-------------LSPEATSLLHSARIDTKPRGWT--------------- 249 N G RIDHI+ + + + I + W Sbjct: 229 NYGTRIDHILCAGPCLHQEHDFQVHDFVSCHMKDCDILIDYKRWKPGDTMRWKGGWGTKL 288 Query: 250 KPSDHTPVIVSL-DIPEPRKKQQDSTSQNMKPI 281 + SDH PV SL +IP+ + S S P+ Sbjct: 289 EGSDHAPVYTSLVEIPDIPQHGTPSLSARYLPM 321 >gi|281357785|ref|ZP_06244271.1| Endonuclease/exonuclease/phosphatase [Victivallis vadensis ATCC BAA-548] gi|281315732|gb|EFA99759.1| Endonuclease/exonuclease/phosphatase [Victivallis vadensis ATCC BAA-548] Length = 286 Score = 77.9 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 45/270 (16%), Positives = 82/270 (30%), Gaps = 22/270 (8%) Query: 5 TVATWNV----NSIRA-RIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYHIE 58 V +NV N RA RI A W++ PD+I QE + ++F + + + Sbjct: 26 RVIGYNVLIGFN--RAERIEETANWLRSRKPDVILFQEIARQSSESFARQAKLWDHSYAA 83 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 C + + SK + + G + + ++ + Sbjct: 84 VCKPWQDYSIGMTSKRPFEMLEMRIDGLHHGY---ILARIDGVYYMSIHLSPFRYAVRIR 140 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 T + + A N + Sbjct: 141 ETEIYAKRLKPLLAAGEKVIMMGDFNNPSPYDAARVNSNAAALEARRY-------ETRPH 193 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 + + D + + FW + + G+RID MLS + Sbjct: 194 IENLRNGFFDFQCMDNLLEAGLEDVCF-FWMKKHNYRP-DVGVRIDMAMLSRNLEDQVVE 251 Query: 239 ARIDTKPRGWTK-PSDHTPVIVSL-DIPEP 266 A +DT R + + SDH PVI++L ++ P Sbjct: 252 AYVDTTRREFFQTLSDHYPVILTLKNLHAP 281 >gi|156094081|ref|XP_001613078.1| AP endonuclease [Plasmodium vivax SaI-1] gi|148801952|gb|EDL43351.1| AP endonuclease (DNA-[apurinic or apyrimidinic site] lyase), putative [Plasmodium vivax] Length = 535 Score = 77.9 bits (190), Expect = 2e-12, Method: Composition-based stats. Identities = 57/348 (16%), Positives = 93/348 (26%), Gaps = 92/348 (26%) Query: 5 TVATWNVNSIRARIHN------LAAWIKENNPDIICLQETKT------------------ 40 T+ TWN+NSI R N ++ N D++C QE + Sbjct: 167 TIVTWNMNSITVRYKNKDKWNAFMSFFNRINADVLCFQEVRLPALNLCAVKNSKEGKRDR 226 Query: 41 -------EDKNFPFET--------LQSLN-YHIETCGQKSYNGVAILSKYQPIEIVTHLP 84 + F+ + N Y + S V I I +L Sbjct: 227 GKVKNTDQKSQVDFDIMSKILKKDFHNYNAYFSLANIKYSGQLVLIKRNIPVKSIRYNLR 286 Query: 85 GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL 144 D + + + Y P+ + K++ + + ++ +F S + Sbjct: 287 LDADPSEHHEEGRVIIAEFSKFYLLSTYTPNNGF-DTVKFERRRLFDEQLKKFVSHLRNM 345 Query: 145 EEPLIFAGDYNIIPQPH---DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT 201 + LI+ GD NI P+ + V Q I + D Sbjct: 346 GKNLIWTGDLNIAPEDIDLSHPAEFRRMKKGNVPKEFVGQPGCTDFERKNFMGILSAGDL 405 Query: 202 HHLYSFWDYYADSW-------SKNKG-------------------------IR------- 222 Y + NKG R Sbjct: 406 VDSYRQLAGKGKAKKGEASKGETNKGETSKGGSCNGAATNGAPDINDNIYTWRCPFLMGK 465 Query: 223 -------IDHIMLSPEATSLLHSARID--TKPRGWTKPSDHTPVIVSL 261 IDH ++S + S I + SDH PVI+ L Sbjct: 466 SCNKAMRIDHFIVSRGFMPNVQSVDIHGYSVFHKNFYGSDHCPVILHL 513 >gi|62087472|dbj|BAD92183.1| arachidonate 5-lipoxygenase variant [Homo sapiens] Length = 368 Score = 77.5 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 58/279 (20%), Positives = 95/279 (34%), Gaps = 35/279 (12%) Query: 2 SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 S +T+ T NVN + A I LA WIK +P + C+QET + ++ L E Sbjct: 11 SHITILTINVNGLNAPIKRHRLANWIKSQDPSVCCIQETHLMCGDTHKLKIKGL----EE 66 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 + A ++ + D + +I +I + L I N+Y P+ Sbjct: 67 DLPSKWKTKAGVAILVSDKTDFKPTKIKRDKEGHYIMVKGSIQQEELTIRNVYAPNTGAP 126 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K + +L+ I D+N D D Sbjct: 127 RFIKQ-----------VLRDLQRDLDSHTIIMRDFNTPLSTLDRSMRQKVNKDI------ 169 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 ++ LQ D R H +F+ ++S+ IDHI+ S S Sbjct: 170 QELNSALQQAELIDIYRTLHPKSTECTFFSALHHTYSE-----IDHIVGSKALLSKCKRT 224 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278 T SDH+ + + L I + Q ST+ + Sbjct: 225 ETITNCL-----SDHSAIKLELKI--KKLTQNLSTTWTL 256 >gi|312130396|ref|YP_003997736.1| endonuclease/exonuclease/phosphatase [Leadbetterella byssophila DSM 17132] gi|311906942|gb|ADQ17383.1| Endonuclease/exonuclease/phosphatase [Leadbetterella byssophila DSM 17132] Length = 275 Score = 77.5 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 39/271 (14%), Positives = 76/271 (28%), Gaps = 28/271 (10%) Query: 4 VTVATWN---------VNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 + ++++N VN+ R + I+ ++ DI+ +QE + L+ Sbjct: 20 LRISSYNIRMNRANDGVNNWNLRKDKVNELIRYHDFDIVGVQE--AFKDQLD-DMLRMKE 76 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 Y G++ S L + + Sbjct: 77 YAYTGSGREDGKSAGEHSAILYKTSRFKLLKSGDFWYSETPDVPGKGWDARCCNRICSWA 136 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 + + K + E + P+I D Sbjct: 137 RFKDLVTKKEFYVFNSHFDHEGV-------EARRNSGKLLVAKMKEIAGKLPVIAMGDLN 189 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI--RIDHIMLSPEA 232 T + Q Q+ T + +F +++ + + RID+I +S Sbjct: 190 STPDTEQVVYISQHYNDTFNASEMPPYGPIGTF-----NAFKYDAALKDRIDYIFVSEHF 244 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + T PSDH PV+V L+I Sbjct: 245 --KVKKYATLTDSYQQKFPSDHLPVVVDLEI 273 >gi|2072948|gb|AAC51261.1| putative p150 [Homo sapiens] Length = 1275 Score = 77.5 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 61/279 (21%), Positives = 102/279 (36%), Gaps = 34/279 (12%) Query: 2 SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 S +T+ T N+N + + I A+WIK +P + C+QET ++ ++ + Sbjct: 6 SHITILTLNINGLNSAIKRHRRASWIKSQDPSVCCIQETHLTCRDTHRLKIKGWRKIYQA 65 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 G++ GVAIL + T D + +I +I + L I N+Y P+ Sbjct: 66 NGKQKKAGVAILVSDKTDFKPT---KIKRDKEGHYIMVKGSIQQEELTILNIYAPNTGAP 122 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K + + +L+ + GD+N D D Sbjct: 123 RFIKQ-----------VLSDLQRDLDSHTLIMGDFNTPLSTLDRSTRQKVNKDT------ 165 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 ++ L D R H Y+F+ ++SK IDHI+ S S Sbjct: 166 QELNSALHQADLIDIYRTLHPKSTEYTFFLAPHHTYSK-----IDHIVGSKALLSKCKRT 220 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278 I T SDH+ + + L I Q ST+ + Sbjct: 221 EIITNYL-----SDHSAIKLELRI--KNLTQSRSTTWKL 252 >gi|315047122|ref|XP_003172936.1| DNA-(apurinic or apyrimidinic site) lyase 2 [Arthroderma gypseum CBS 118893] gi|311343322|gb|EFR02525.1| DNA-(apurinic or apyrimidinic site) lyase 2 [Arthroderma gypseum CBS 118893] Length = 604 Score = 77.5 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 4/68 (5%) Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253 + +Y+ W+ ++ N G RID+I+ S + + I G SD Sbjct: 259 CREFHPNRTGMYTCWEQRVNARPGNYGSRIDYILCSDDIRPWFVESNIQEGLMG----SD 314 Query: 254 HTPVIVSL 261 H PV S+ Sbjct: 315 HCPVYASI 322 Score = 53.3 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 24/67 (35%), Gaps = 9/67 (13%) Query: 1 MSVVTVATWNVNSIRARI--------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52 M+ + + TWNVN IR A DI+ QE K + K+ + + Sbjct: 1 MA-LRLTTWNVNGIRNPFSYEPWRGNRTFGAMFDILEADIVVFQEAKIQRKDLQDDMVLV 59 Query: 53 LNYHIET 59 + Sbjct: 60 PGWDCYF 66 >gi|242266576|gb|ACS91139.1| APN2 [Microsporum gypseum] Length = 596 Score = 77.5 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 4/68 (5%) Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253 + +Y+ W+ ++ N G RID+I+ S + + I G SD Sbjct: 251 CREFHPNRTGMYTCWEQRVNARPGNYGSRIDYILCSDDIRPWFVESNIQEGLMG----SD 306 Query: 254 HTPVIVSL 261 H PV S+ Sbjct: 307 HCPVYASI 314 >gi|242266571|gb|ACS91135.1| APN2 [Microsporum gypseum] Length = 596 Score = 77.5 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 4/68 (5%) Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253 + +Y+ W+ ++ N G RID+I+ S + + I G SD Sbjct: 251 CREFHPNRTGMYTCWEQRVNARPGNYGSRIDYILCSDDIRPWFVESNIQEGLMG----SD 306 Query: 254 HTPVIVSL 261 H PV S+ Sbjct: 307 HCPVYASI 314 >gi|242266565|gb|ACS91130.1| APN2 [Microsporum gypseum] Length = 596 Score = 77.5 bits (189), Expect = 2e-12, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 4/68 (5%) Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253 + +Y+ W+ ++ N G RID+I+ S + + I G SD Sbjct: 251 CREFHPNRTGMYTCWEQRVNARPGNYGSRIDYILCSDDIRPWFVESNIQEGLMG----SD 306 Query: 254 HTPVIVSL 261 H PV S+ Sbjct: 307 HCPVYASI 314 >gi|166208515|gb|ABY84902.1| DNA lyase [Beauveria sp. GN-2004a] Length = 576 Score = 77.1 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 5/70 (7%) Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 D R H T +++ WD ++ N G RID+I+ S S + I G Sbjct: 228 WDICRCFHPTRLGMHTCWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQEGLMG--- 284 Query: 251 PSDHTPVIVS 260 SDH PV + Sbjct: 285 -SDHCPVYAT 293 Score = 39.4 bits (90), Expect = 0.56, Method: Composition-based stats. Identities = 9/60 (15%), Positives = 24/60 (40%), Gaps = 3/60 (5%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80 + ++ DI+ +QETK + K+ + + + + + G + ++ Y Sbjct: 5 MFDILE---ADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATC 61 >gi|165874703|gb|ABY68234.1| DNA lyase [Beauveria bassiana] Length = 576 Score = 77.1 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 5/70 (7%) Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 D R H T +++ WD ++ N G RID+I+ S S + I G Sbjct: 228 WDICRCFHPTRLGMHTCWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQEGLMG--- 284 Query: 251 PSDHTPVIVS 260 SDH PV + Sbjct: 285 -SDHCPVYAT 293 Score = 40.9 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 10/60 (16%), Positives = 22/60 (36%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80 A DI+ +QETK + K+ + + + + + G + ++ Y Sbjct: 2 FQAMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATC 61 >gi|62085846|gb|AAX63314.1| DNA lyase [Beauveria bassiana] Length = 579 Score = 77.1 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 5/70 (7%) Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 D R H T +++ WD ++ N G RID+I+ S S + I G Sbjct: 228 WDICRCFHPTRLGMHTCWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQEGLMG--- 284 Query: 251 PSDHTPVIVS 260 SDH PV + Sbjct: 285 -SDHCPVYAT 293 Score = 40.9 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 10/60 (16%), Positives = 22/60 (36%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80 A DI+ +QETK + K+ + + + + + G + ++ Y Sbjct: 2 FQAMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATC 61 >gi|62085834|gb|AAX63308.1| DNA lyase [Beauveria bassiana] Length = 579 Score = 77.1 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 5/70 (7%) Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 D R H T +++ WD ++ N G RID+I+ S S + I G Sbjct: 228 WDICRCFHPTRLGMHTCWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQEGLMG--- 284 Query: 251 PSDHTPVIVS 260 SDH PV + Sbjct: 285 -SDHCPVYAT 293 Score = 40.9 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 10/60 (16%), Positives = 22/60 (36%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80 A DI+ +QETK + K+ + + + + + G + ++ Y Sbjct: 2 FQAMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATC 61 >gi|62085804|gb|AAX63293.1| DNA lyase [Beauveria bassiana] Length = 579 Score = 77.1 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 5/70 (7%) Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 D R H T +++ WD ++ N G RID+I+ S S + I G Sbjct: 228 WDICRCFHPTRLGMHTCWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQEGLMG--- 284 Query: 251 PSDHTPVIVS 260 SDH PV + Sbjct: 285 -SDHCPVYAT 293 Score = 40.9 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 10/60 (16%), Positives = 22/60 (36%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80 A DI+ +QETK + K+ + + + + + G + ++ Y Sbjct: 2 FQAMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATC 61 >gi|62085790|gb|AAX63286.1| DNA lyase [Beauveria bassiana] Length = 579 Score = 77.1 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 5/70 (7%) Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 D R H T +++ WD ++ N G RID+I+ S S + I G Sbjct: 228 WDICRCFHPTRLGMHTCWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQEGLMG--- 284 Query: 251 PSDHTPVIVS 260 SDH PV + Sbjct: 285 -SDHCPVYAT 293 Score = 40.9 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 10/60 (16%), Positives = 22/60 (36%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80 A DI+ +QETK + K+ + + + + + G + ++ Y Sbjct: 2 FQAMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATC 61 >gi|62085822|gb|AAX63302.1| DNA lyase [Beauveria bassiana] Length = 579 Score = 77.1 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 5/70 (7%) Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 D R H T +++ WD ++ N G RID+I+ S S + I G Sbjct: 228 WDICRCFHPTRLGMHTCWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQEGLMG--- 284 Query: 251 PSDHTPVIVS 260 SDH PV + Sbjct: 285 -SDHCPVYAT 293 Score = 40.9 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 10/60 (16%), Positives = 22/60 (36%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80 A DI+ +QETK + K+ + + + + + G + ++ Y Sbjct: 2 FQAMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATC 61 >gi|62085838|gb|AAX63310.1| DNA lyase [Beauveria bassiana] Length = 579 Score = 77.1 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 5/70 (7%) Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 D R H T +++ WD ++ N G RID+I+ S S + I G Sbjct: 228 WDICRCFHPTRLGMHTCWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQEGLMG--- 284 Query: 251 PSDHTPVIVS 260 SDH PV + Sbjct: 285 -SDHCPVYAT 293 Score = 40.9 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 10/60 (16%), Positives = 22/60 (36%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80 A DI+ +QETK + K+ + + + + + G + ++ Y Sbjct: 2 FQAMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATC 61 >gi|62085798|gb|AAX63290.1| DNA lyase [Beauveria bassiana] gi|62085850|gb|AAX63316.1| DNA lyase [Beauveria bassiana] Length = 579 Score = 77.1 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 5/70 (7%) Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 D R H T +++ WD ++ N G RID+I+ S S + I G Sbjct: 228 WDICRCFHPTRLGMHTCWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQEGLMG--- 284 Query: 251 PSDHTPVIVS 260 SDH PV + Sbjct: 285 -SDHCPVYAT 293 Score = 40.9 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 10/60 (16%), Positives = 22/60 (36%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80 A DI+ +QETK + K+ + + + + + G + ++ Y Sbjct: 2 FQAMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATC 61 >gi|62085788|gb|AAX63285.1| DNA lyase [Beauveria bassiana] gi|62085830|gb|AAX63306.1| DNA lyase [Beauveria bassiana] gi|62085840|gb|AAX63311.1| DNA lyase [Beauveria bassiana] Length = 579 Score = 77.1 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 5/70 (7%) Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 D R H T +++ WD ++ N G RID+I+ S S + I G Sbjct: 228 WDICRCFHPTRLGMHTCWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQEGLMG--- 284 Query: 251 PSDHTPVIVS 260 SDH PV + Sbjct: 285 -SDHCPVYAT 293 Score = 40.9 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 10/60 (16%), Positives = 22/60 (36%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80 A DI+ +QETK + K+ + + + + + G + ++ Y Sbjct: 2 FQAMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATC 61 >gi|62085874|gb|AAX63328.1| DNA lyase [Beauveria bassiana] Length = 579 Score = 77.1 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 5/70 (7%) Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 D R H T +++ WD ++ N G RID+I+ S S + I G Sbjct: 228 WDICRCFHPTRLGMHTCWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQEGLMG--- 284 Query: 251 PSDHTPVIVS 260 SDH PV + Sbjct: 285 -SDHCPVYAT 293 Score = 40.9 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 10/60 (16%), Positives = 22/60 (36%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80 A DI+ +QETK + K+ + + + + + G + ++ Y Sbjct: 2 FQAMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATC 61 >gi|62085810|gb|AAX63296.1| DNA lyase [Beauveria bassiana] Length = 579 Score = 77.1 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 5/70 (7%) Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 D R H T +++ WD ++ N G RID+I+ S S + I G Sbjct: 228 WDICRCFHPTRLGMHTCWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQEGLMG--- 284 Query: 251 PSDHTPVIVS 260 SDH PV + Sbjct: 285 -SDHCPVYAT 293 Score = 40.9 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 10/60 (16%), Positives = 22/60 (36%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80 A DI+ +QETK + K+ + + + + + G + ++ Y Sbjct: 2 FQAMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATC 61 >gi|62085892|gb|AAX63337.1| DNA lyase [Cordyceps brongniartii] Length = 580 Score = 77.1 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 5/70 (7%) Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 D R H T +++ WD ++ N G RID+I+ S S + I G Sbjct: 228 WDICRCFHPTRLGMHTCWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQEGLMG--- 284 Query: 251 PSDHTPVIVS 260 SDH PV + Sbjct: 285 -SDHCPVYAT 293 Score = 40.9 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 10/60 (16%), Positives = 22/60 (36%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80 A DI+ +QETK + K+ + + + + + G + ++ Y Sbjct: 2 FQAMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATC 61 >gi|62085780|gb|AAX63281.1| DNA lyase [Beauveria sp. ARSEF 32] Length = 579 Score = 77.1 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 5/70 (7%) Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 D R H T +++ WD ++ N G RID+I+ S S + I G Sbjct: 228 WDICRCFHPTRLGMHTCWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQEGLMG--- 284 Query: 251 PSDHTPVIVS 260 SDH PV + Sbjct: 285 -SDHCPVYAT 293 Score = 40.9 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 10/60 (16%), Positives = 22/60 (36%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80 A DI+ +QETK + K+ + + + + + G + ++ Y Sbjct: 2 FQAMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATC 61 >gi|62085820|gb|AAX63301.1| DNA lyase [Beauveria bassiana] Length = 579 Score = 77.1 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 5/70 (7%) Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 D R H T +++ WD ++ N G RID+I+ S S + I G Sbjct: 228 WDICRCFHPTRLGMHTCWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQEGLMG--- 284 Query: 251 PSDHTPVIVS 260 SDH PV + Sbjct: 285 -SDHCPVYAT 293 Score = 40.9 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 10/60 (16%), Positives = 22/60 (36%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80 A DI+ +QETK + K+ + + + + + G + ++ Y Sbjct: 2 FQAMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATC 61 >gi|62085808|gb|AAX63295.1| DNA lyase [Beauveria bassiana] Length = 579 Score = 77.1 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 5/70 (7%) Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 D R H T +++ WD ++ N G RID+I+ S S + I G Sbjct: 228 WDICRCFHPTRLGMHTCWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQEGLMG--- 284 Query: 251 PSDHTPVIVS 260 SDH PV + Sbjct: 285 -SDHCPVYAT 293 Score = 40.9 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 10/60 (16%), Positives = 22/60 (36%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80 A DI+ +QETK + K+ + + + + + G + ++ Y Sbjct: 2 FQAMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATC 61 >gi|62085836|gb|AAX63309.1| DNA lyase [Cordyceps brongniartii] Length = 579 Score = 77.1 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 5/70 (7%) Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 D R H T +++ WD ++ N G RID+I+ S S + I G Sbjct: 228 WDICRCFHPTRLGMHTCWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQEGLMG--- 284 Query: 251 PSDHTPVIVS 260 SDH PV + Sbjct: 285 -SDHCPVYAT 293 Score = 40.9 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 10/60 (16%), Positives = 22/60 (36%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80 A DI+ +QETK + K+ + + + + + G + ++ Y Sbjct: 2 FQAMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATC 61 >gi|62085782|gb|AAX63282.1| DNA lyase [Beauveria bassiana] gi|62085784|gb|AAX63283.1| DNA lyase [Beauveria bassiana] Length = 579 Score = 77.1 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 5/70 (7%) Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 D R H T +++ WD ++ N G RID+I+ S S + I G Sbjct: 228 WDICRCFHPTRLGMHTCWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQEGLMG--- 284 Query: 251 PSDHTPVIVS 260 SDH PV + Sbjct: 285 -SDHCPVYAT 293 Score = 40.9 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 10/60 (16%), Positives = 22/60 (36%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80 A DI+ +QETK + K+ + + + + + G + ++ Y Sbjct: 2 FQAMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATC 61 >gi|62085786|gb|AAX63284.1| DNA lyase [Beauveria bassiana] gi|62085844|gb|AAX63313.1| DNA lyase [Beauveria bassiana] Length = 579 Score = 77.1 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 5/70 (7%) Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 D R H T +++ WD ++ N G RID+I+ S S + I G Sbjct: 228 WDICRCFHPTRLGMHTCWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQEGLMG--- 284 Query: 251 PSDHTPVIVS 260 SDH PV + Sbjct: 285 -SDHCPVYAT 293 Score = 40.9 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 10/60 (16%), Positives = 22/60 (36%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80 A DI+ +QETK + K+ + + + + + G + ++ Y Sbjct: 2 FQAMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATC 61 >gi|62085794|gb|AAX63288.1| DNA lyase [Beauveria bassiana] Length = 579 Score = 77.1 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 5/70 (7%) Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 D R H T +++ WD ++ N G RID+I+ S S + I G Sbjct: 228 WDICRCFHPTRLGMHTCWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQEGLMG--- 284 Query: 251 PSDHTPVIVS 260 SDH PV + Sbjct: 285 -SDHCPVYAT 293 Score = 40.9 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 10/60 (16%), Positives = 22/60 (36%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80 A DI+ +QETK + K+ + + + + + G + ++ Y Sbjct: 2 FQAMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATC 61 >gi|62085802|gb|AAX63292.1| DNA lyase [Beauveria bassiana] Length = 579 Score = 77.1 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 5/70 (7%) Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 D R H T +++ WD ++ N G RID+I+ S S + I G Sbjct: 228 WDICRCFHPTRLGMHTCWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQEGLMG--- 284 Query: 251 PSDHTPVIVS 260 SDH PV + Sbjct: 285 -SDHCPVYAT 293 Score = 40.9 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 10/60 (16%), Positives = 22/60 (36%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80 A DI+ +QETK + K+ + + + + + G + ++ Y Sbjct: 2 FQAMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATC 61 >gi|227543866|ref|ZP_03973915.1| exodeoxyribonuclease III [Lactobacillus reuteri CF48-3A] gi|300909611|ref|ZP_07127072.1| exodeoxyribonuclease III [Lactobacillus reuteri SD2112] gi|227186154|gb|EEI66225.1| exodeoxyribonuclease III [Lactobacillus reuteri CF48-3A] gi|300893476|gb|EFK86835.1| exodeoxyribonuclease III [Lactobacillus reuteri SD2112] Length = 174 Score = 77.1 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 5/130 (3%) Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG 190 R L+ +P+I GD ++ QP D P + A FT + R F KL N G Sbjct: 43 WDRAFLDYVTNLQSSKPVIIGGDMSVAYQPIDLAEPTEDHHKAGFTKQERADFGKLLNAG 102 Query: 191 FTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT 249 TD R H H Y++W+Y D+ +N G R+++ ++S + A+I + Sbjct: 103 LTDTFRYLHPNLHGAYTWWNYRYDARERNVGWRLNYFLVSDVWKERIEEAKILSDV---- 158 Query: 250 KPSDHTPVIV 259 K S H P+ + Sbjct: 159 KGSSHCPIEL 168 >gi|256377724|ref|YP_003101384.1| endonuclease/exonuclease/phosphatase [Actinosynnema mirum DSM 43827] gi|255922027|gb|ACU37538.1| Endonuclease/exonuclease/phosphatase [Actinosynnema mirum DSM 43827] Length = 276 Score = 77.1 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 52/264 (19%), Positives = 89/264 (33%), Gaps = 16/264 (6%) Query: 4 VTVATWNVNSIRA---RIHNLAAWIKENNPDIICLQETKT-EDKNFPFETLQSLNYHIET 59 + V TWNV RA R W+ D++ L E E L+ Y + Sbjct: 7 LRVLTWNVQ--RASAARTRAQVEWLVRQEADVLVLTEVSAGESGGLLARWLRERGYQVLL 64 Query: 60 CGQKSYNGVAI-LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + + L+ + + G + + + + + + Sbjct: 65 PDPAPEDRYRVLLACPADVGLEEADSGVPMPHRCVAAKVKSSAMEVGVVGLYVPSRGPRE 124 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + + L + RL P++ AGD N++ H +P F Sbjct: 125 RRNVAKRAFQEEVSAALPGLTARLGAAGPVVVAGDQNVVEPGHIPAHP-------VFGAW 177 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 ++ GFTDA R H +S++ + +N G R DH+ L+ +L Sbjct: 178 EYDFYRSFAEAGFTDAFRLRHPEAVEHSWFGRDTGAGKRN-GYRFDHVFLTTTHAALARD 236 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 R PR SDH+ + V LD Sbjct: 237 CRYLHTPR-EDGLSDHSAMEVVLD 259 >gi|322696797|gb|EFY88584.1| DNA lyase [Metarhizium acridum CQMa 102] Length = 634 Score = 77.1 bits (188), Expect = 2e-12, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 5/71 (7%) Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 D R H + + + WD ++ N G RID+I+ S SA I G Sbjct: 254 WDLCRCFHPSRLGMNTCWDTKKNTRPANNGSRIDYILCSNGIKDWFTSANIQEGLMG--- 310 Query: 251 PSDHTPVIVSL 261 SDH PV ++ Sbjct: 311 -SDHCPVFATI 320 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 31/84 (36%), Gaps = 8/84 (9%) Query: 5 TVATWNVNSIRA-------RIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56 + TWNVN IR R A DI+ +QETK + K+ + + + Sbjct: 4 RITTWNVNGIRNPFGYQPWREQRTFQAMFDILESDIVVMQETKIQRKDLQDDMVLVPGWD 63 Query: 57 IETCGQKSYNGVAILSKYQPIEIV 80 + K G + ++ Y Sbjct: 64 VFFSLPKHKKGYSGVAIYTRNASC 87 >gi|259482425|tpe|CBF76897.1| TPA: DNA lyase Apn2 (AFU_orthologue; AFUA_3G06180) [Aspergillus nidulans FGSC A4] Length = 612 Score = 77.1 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 26/72 (36%), Gaps = 4/72 (5%) Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 F +Y+ W+ ++ N G RID+++ S + + I G Sbjct: 252 FDICRSFHPKRKGMYTCWEQRINARPGNYGSRIDYVLCSLDMKDWFFDSNIQEGLMG--- 308 Query: 251 PSDHTPVIVSLD 262 SDH PV Sbjct: 309 -SDHCPVYAVFK 319 Score = 43.6 bits (101), Expect = 0.027, Method: Composition-based stats. Identities = 11/63 (17%), Positives = 22/63 (34%), Gaps = 11/63 (17%) Query: 5 TVATWNVNSI--------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56 + TWN + R+ + DI+ +QETK + K+ + + + Sbjct: 4 RITTWN--GLNPFSYEPWRS-TRTFESMFDILEADIVVVQETKIQRKDLRDDMVLVPGWD 60 Query: 57 IET 59 Sbjct: 61 CYF 63 >gi|209878826|ref|XP_002140854.1| endonuclease/exonuclease/phosphatase family protein [Cryptosporidium muris RN66] gi|209556460|gb|EEA06505.1| endonuclease/exonuclease/phosphatase family protein [Cryptosporidium muris RN66] Length = 482 Score = 77.1 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 31/80 (38%), Gaps = 6/80 (7%) Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL- 261 + Y+ WD S N+G RID ++S + + I G SDH P+++ + Sbjct: 301 NKYTCWDQTKCSRINNRGSRIDLFLVSRNLINRVKGCEIIDNVCG----SDHCPIVLIMS 356 Query: 262 -DIPEPRKKQQDSTSQNMKP 280 ++ S P Sbjct: 357 GNLQNINPNTPPSLCSKYLP 376 >gi|67537132|ref|XP_662340.1| hypothetical protein AN4736.2 [Aspergillus nidulans FGSC A4] gi|40741588|gb|EAA60778.1| hypothetical protein AN4736.2 [Aspergillus nidulans FGSC A4] Length = 554 Score = 77.1 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 26/72 (36%), Gaps = 4/72 (5%) Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 F +Y+ W+ ++ N G RID+++ S + + I G Sbjct: 194 FDICRSFHPKRKGMYTCWEQRINARPGNYGSRIDYVLCSLDMKDWFFDSNIQEGLMG--- 250 Query: 251 PSDHTPVIVSLD 262 SDH PV Sbjct: 251 -SDHCPVYAVFK 261 >gi|29501198|dbj|BAC67542.1| DNA lyase [Isaria tenuipes] Length = 607 Score = 77.1 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 29/74 (39%), Gaps = 5/74 (6%) Query: 188 NMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR 246 + D R H +++ WD ++ N G RID+I+ S + I Sbjct: 242 DGVLWDICRCFHPTRRGMHTCWDTKRNTRPANLGSRIDYILCSDGIKDWFVDSNIQEGLM 301 Query: 247 GWTKPSDHTPVIVS 260 G SDH PV + Sbjct: 302 G----SDHCPVYAT 311 Score = 42.1 bits (97), Expect = 0.090, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 23/65 (35%), Gaps = 1/65 (1%) Query: 17 RIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75 R A DI+ LQETK + K+ + + + + + G + ++ Y Sbjct: 15 REKRTFQAMFDILEADIVILQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYT 74 Query: 76 PIEIV 80 Sbjct: 75 KNATC 79 >gi|62085812|gb|AAX63297.1| DNA lyase [Beauveria bassiana] gi|62085814|gb|AAX63298.1| DNA lyase [Beauveria bassiana] gi|62085824|gb|AAX63303.1| DNA lyase [Beauveria bassiana] gi|62085826|gb|AAX63304.1| DNA lyase [Beauveria bassiana] Length = 579 Score = 77.1 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 5/70 (7%) Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 D R H T +++ WD ++ N G RID+I S S + I G Sbjct: 228 WDICRCFHPTRLGMHTCWDTKRNTRPANVGSRIDYIFCSDGLKSWFVDSNIQEGLMG--- 284 Query: 251 PSDHTPVIVS 260 SDH PV + Sbjct: 285 -SDHCPVYAT 293 Score = 40.2 bits (92), Expect = 0.32, Method: Composition-based stats. Identities = 10/60 (16%), Positives = 22/60 (36%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80 A DI+ +QETK + K+ + + + + + G + ++ Y Sbjct: 2 FQAMFDILEADIVIMQETKIQRKDLRDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATC 61 >gi|62085890|gb|AAX63336.1| DNA lyase [Beauveria bassiana] Length = 579 Score = 77.1 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 5/70 (7%) Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 D R H T +++ WD ++ N G RID+I S S + I G Sbjct: 228 WDICRCFHPTRLGMHTCWDTKRNTRPANVGSRIDYIFCSDGLKSWFVDSNIQEGLMG--- 284 Query: 251 PSDHTPVIVS 260 SDH PV + Sbjct: 285 -SDHCPVYAT 293 Score = 40.2 bits (92), Expect = 0.32, Method: Composition-based stats. Identities = 10/60 (16%), Positives = 22/60 (36%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80 A DI+ +QETK + K+ + + + + + G + ++ Y Sbjct: 2 FQAMFDILEADIVIMQETKIQRKDLRDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATC 61 >gi|62085806|gb|AAX63294.1| DNA lyase [Beauveria bassiana] gi|62085816|gb|AAX63299.1| DNA lyase [Beauveria bassiana] gi|62085818|gb|AAX63300.1| DNA lyase [Beauveria bassiana] gi|62085828|gb|AAX63305.1| DNA lyase [Beauveria bassiana] gi|62085832|gb|AAX63307.1| DNA lyase [Beauveria bassiana] gi|62085842|gb|AAX63312.1| DNA lyase [Beauveria bassiana] gi|62085848|gb|AAX63315.1| DNA lyase [Beauveria bassiana] Length = 579 Score = 77.1 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 5/70 (7%) Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 D R H T +++ WD ++ N G RID+I S S + I G Sbjct: 228 WDICRCFHPTRLGMHTCWDTKRNTRPANVGSRIDYIFCSDGLKSWFVDSNIQEGLMG--- 284 Query: 251 PSDHTPVIVS 260 SDH PV + Sbjct: 285 -SDHCPVYAT 293 Score = 40.2 bits (92), Expect = 0.32, Method: Composition-based stats. Identities = 10/60 (16%), Positives = 22/60 (36%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80 A DI+ +QETK + K+ + + + + + G + ++ Y Sbjct: 2 FQAMFDILEADIVIMQETKIQRKDLRDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATC 61 >gi|62085800|gb|AAX63291.1| DNA lyase [Beauveria bassiana] Length = 579 Score = 77.1 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 5/70 (7%) Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 D R H T +++ WD ++ N G RID+I S S + I G Sbjct: 228 WDICRCFHPTRLGMHTCWDTKRNTRPANVGSRIDYIFCSDGLKSWFVDSNIQEGLMG--- 284 Query: 251 PSDHTPVIVS 260 SDH PV + Sbjct: 285 -SDHCPVYAT 293 Score = 40.2 bits (92), Expect = 0.32, Method: Composition-based stats. Identities = 10/60 (16%), Positives = 22/60 (36%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80 A DI+ +QETK + K+ + + + + + G + ++ Y Sbjct: 2 FQAMFDILEADIVIMQETKIQRKDLRDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATC 61 >gi|62085884|gb|AAX63333.1| DNA lyase [Beauveria bassiana] Length = 579 Score = 77.1 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 5/70 (7%) Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 D R H T +++ WD ++ N G RID+I S S + I G Sbjct: 228 WDICRCFHPTRLGMHTCWDTKRNTRPANVGSRIDYIFCSDGLKSWFVDSNIQEGLMG--- 284 Query: 251 PSDHTPVIVS 260 SDH PV + Sbjct: 285 -SDHCPVYAT 293 Score = 40.2 bits (92), Expect = 0.32, Method: Composition-based stats. Identities = 10/60 (16%), Positives = 22/60 (36%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80 A DI+ +QETK + K+ + + + + + G + ++ Y Sbjct: 2 FQAMFDILEADIVIMQETKIQRKDLRDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATC 61 >gi|62085852|gb|AAX63317.1| DNA lyase [Cordyceps staphylinidicola] gi|62085854|gb|AAX63318.1| DNA lyase [Beauveria bassiana] gi|62085856|gb|AAX63319.1| DNA lyase [Beauveria bassiana] gi|62085858|gb|AAX63320.1| DNA lyase [Cordyceps staphylinidicola] gi|62085860|gb|AAX63321.1| DNA lyase [Cordyceps staphylinidicola] gi|62085862|gb|AAX63322.1| DNA lyase [Cordyceps staphylinidicola] gi|62085864|gb|AAX63323.1| DNA lyase [Cordyceps staphylinidicola] gi|62085866|gb|AAX63324.1| DNA lyase [Cordyceps bassiana] gi|62085868|gb|AAX63325.1| DNA lyase [Beauveria bassiana] gi|62085870|gb|AAX63326.1| DNA lyase [Beauveria bassiana] gi|62085872|gb|AAX63327.1| DNA lyase [Beauveria bassiana] gi|62085876|gb|AAX63329.1| DNA lyase [Beauveria bassiana] gi|62085878|gb|AAX63330.1| DNA lyase [Beauveria bassiana] gi|62085880|gb|AAX63331.1| DNA lyase [Beauveria bassiana] gi|62085882|gb|AAX63332.1| DNA lyase [Beauveria bassiana] Length = 579 Score = 77.1 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 5/70 (7%) Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 D R H T +++ WD ++ N G RID+I S S + I G Sbjct: 228 WDICRCFHPTRLGMHTCWDTKRNTRPANVGSRIDYIFCSDGLKSWFVDSNIQEGLMG--- 284 Query: 251 PSDHTPVIVS 260 SDH PV + Sbjct: 285 -SDHCPVYAT 293 Score = 40.2 bits (92), Expect = 0.32, Method: Composition-based stats. Identities = 10/60 (16%), Positives = 22/60 (36%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80 A DI+ +QETK + K+ + + + + + G + ++ Y Sbjct: 2 FQAMFDILEADIVIMQETKIQRKDLRDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATC 61 >gi|62085886|gb|AAX63334.1| DNA lyase [Beauveria bassiana] gi|62085888|gb|AAX63335.1| DNA lyase [Beauveria bassiana] Length = 579 Score = 77.1 bits (188), Expect = 3e-12, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 5/70 (7%) Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 D R H T +++ WD ++ N G RID+I S S + I G Sbjct: 228 WDICRCFHPTRLGMHTCWDTKRNTRPANVGSRIDYIFCSDGLKSWFVDSNIQEGLMG--- 284 Query: 251 PSDHTPVIVS 260 SDH PV + Sbjct: 285 -SDHCPVYAT 293 Score = 40.2 bits (92), Expect = 0.32, Method: Composition-based stats. Identities = 10/60 (16%), Positives = 22/60 (36%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80 A DI+ +QETK + K+ + + + + + G + ++ Y Sbjct: 2 FQAMFDILEADIVIMQETKIQRKDLRDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATC 61 >gi|77410027|ref|ZP_00786588.1| exodeoxyribonuclease [Streptococcus agalactiae COH1] gi|77171365|gb|EAO74673.1| exodeoxyribonuclease [Streptococcus agalactiae COH1] Length = 224 Score = 76.8 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 41/138 (29%), Positives = 62/138 (44%), Gaps = 8/138 (5%) Query: 129 SWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN 188 L+ ++P++ GDYN+ + D NP A FT E RQ F L Sbjct: 92 QIWDIKYAEYLATLDSQKPVLATGDYNVAHKEIDLANPSSNRRSAGFTAEERQGFTNLLA 151 Query: 189 MGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIRIDHIMLSPEATSLLHSAR-IDTKP 245 GFTD R H D ++YS+W + S N G RID+ + S + + I + Sbjct: 152 KGFTDTFRYLHGDVPNVYSWWAQRSRTSKINNTGWRIDYWLTSNRVADKITKSEMIHSGD 211 Query: 246 RGWTKPSDHTPVIVSLDI 263 R DHTP+I+ +++ Sbjct: 212 RQ-----DHTPIILEIEL 224 >gi|29420517|dbj|BAC66502.1| DNA lyase [Isaria tenuipes] Length = 611 Score = 76.8 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 29/74 (39%), Gaps = 5/74 (6%) Query: 188 NMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR 246 + D R H +++ WD ++ N G RID+I+ S + I Sbjct: 242 DGVLWDICRCFHPTRRGMHTCWDTKRNTRPANLGSRIDYILCSDGIKDWFVDSNIQEGLM 301 Query: 247 GWTKPSDHTPVIVS 260 G SDH PV + Sbjct: 302 G----SDHCPVYAT 311 Score = 41.3 bits (95), Expect = 0.16, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 22/65 (33%), Gaps = 1/65 (1%) Query: 17 RIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75 R A DI+ LQETK + K+ + + + + G + ++ Y Sbjct: 15 REKRTFQAMFDILEADIVILQETKIQRKDLQDDMVLVPGWDAYFSLPQHKKGYSGVAIYT 74 Query: 76 PIEIV 80 Sbjct: 75 RNATC 79 >gi|307353970|ref|YP_003895021.1| endonuclease/exonuclease/phosphatase [Methanoplanus petrolearius DSM 11571] gi|307157203|gb|ADN36583.1| Endonuclease/exonuclease/phosphatase [Methanoplanus petrolearius DSM 11571] Length = 276 Score = 76.8 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 48/259 (18%), Positives = 87/259 (33%), Gaps = 21/259 (8%) Query: 7 ATWNV-N-SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFET-LQSLNYHIETCGQK 63 WN+ N SI R AAW+ N D++ L E K + F E QS Y++ + Sbjct: 35 ICWNIGNPSI-DRAKKQAAWLITQNFDLLLLTECKNSEGCFYIEKYFQSFGYNVVFPKPE 93 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 ++ + V+ + AR + ++ + + I Y+P + T Sbjct: 94 GK-EYGVMVISKFKPEVSDFSKLMTFLSARVVSVKIPLSDKIIEIIVTYVPSRDAST--- 149 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 K + + L + I + + + F + + Sbjct: 150 ------EKKERKKKFLKNLLSCFENDQTSNNRIFCGDFNILESDHNPHYSFFEEWEYEFY 203 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 L N DA R + YS+ D G R DH S + + Sbjct: 204 SSLSNFHLKDAYRYHNPAKMEYSWVGRTGD------GYRYDHFFASENLIPNIIECKYVH 257 Query: 244 KPRGWTKPSDHTPVIVSLD 262 +PR + SDH+ ++ ++ Sbjct: 258 EPR-EKRLSDHSSLVCKIE 275 >gi|6319452|ref|NP_009534.1| Apn2p [Saccharomyces cerevisiae S288c] gi|586406|sp|P38207|APN2_YEAST RecName: Full=DNA-(apurinic or apyrimidinic site) lyase 2; AltName: Full=AP endonuclease 2; AltName: Full=Apurinic-apyrimidinic endonuclease 2 gi|536013|emb|CAA84838.1| unnamed protein product [Saccharomyces cerevisiae] gi|285810316|tpg|DAA07101.1| TPA: Apn2p [Saccharomyces cerevisiae S288c] Length = 520 Score = 76.8 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 6/78 (7%) Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 +Y+ W+ + N G RID I++S + + +A I G SDH PV LD Sbjct: 307 KMYTVWNMLKNLRPSNYGSRIDFILVSLKLERCIKAADILPDILG----SDHCPVYSDLD 362 Query: 263 IPEPRKKQQDSTSQNMKP 280 I + + T+Q P Sbjct: 363 I--LDDRIEPGTTQVPIP 378 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 39/138 (28%), Gaps = 17/138 (12%) Query: 2 SVVTVATWNVNSIRA------------RIHNLAAWIKENNPDIICLQETKTEDKNFPFET 49 + + T+NVN IR + ++ + + DII QE KTE + Sbjct: 15 NTIRFLTFNVNGIRTFFHYQPFSQMNQSLRSVFDFFR---ADIITFQELKTEKLSISKWG 71 Query: 50 LQSLNYHIETCGQKS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107 Y + Q Y+GV + + + + N + Sbjct: 72 RVDGFYSFISIPQTRKGYSGVGCWIRIPEKNHPLYHALQVVKAEEGITGYLTIKNGKHSA 131 Query: 108 IGNLYLPHGNPITSTKYD 125 I + D Sbjct: 132 ISYRNDVNQGIGGYDSLD 149 >gi|300176314|emb|CBK23625.2| unnamed protein product [Blastocystis hominis] Length = 252 Score = 76.8 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 35/215 (16%), Positives = 61/215 (28%), Gaps = 12/215 (5%) Query: 54 NYHIETCGQKSYNGVAILSKY------QPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107 Y + G + + + P + D A Sbjct: 12 GYDAFSSHCAHNGGYSGVITFLGSFSQHPKSTIYQRYDSDFVKSADMEGRVCFTFFDNCA 71 Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167 I N+Y P G+ S + + + + + I GD+N + Sbjct: 72 ILNVYFPCGSEEDSARCSFRERFYELIMDLVKIIKVDYPNCILLGDFNTAIACRIGWRLC 131 Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227 + F L + A+ + YS ++ N G RID+I+ Sbjct: 132 YHPKSSSFYLAFMIRDGGCGMIDCFRAL--YPSERNAYSCFNTKLKGRINNFGTRIDYIV 189 Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + + L I + G SDH PV+ D Sbjct: 190 CTRPLRNCLVECAIRSDVTG----SDHLPVVAEFD 220 >gi|51013817|gb|AAT93202.1| YBL019W [Saccharomyces cerevisiae] Length = 520 Score = 76.8 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 6/78 (7%) Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 +Y+ W+ + N G RID I++S + + +A I G SDH PV LD Sbjct: 307 KMYTVWNMLKNLRPSNYGSRIDFILVSLKLERCIKAADILPDILG----SDHCPVYSDLD 362 Query: 263 IPEPRKKQQDSTSQNMKP 280 I + + T+Q P Sbjct: 363 I--LDDRIEPGTTQVPIP 378 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 22/137 (16%), Positives = 38/137 (27%), Gaps = 17/137 (12%) Query: 3 VVTVATWNVNSIRA------------RIHNLAAWIKENNPDIICLQETKTEDKNFPFETL 50 + T+NVN IR + ++ + + DII QE KTE + Sbjct: 16 TIRFLTFNVNGIRTFFHYQPFSQMNQSLRSVFDFFR---ADIITFQELKTEKLSISKWGR 72 Query: 51 QSLNYHIETCGQKS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108 Y + Q Y+GV + + + + N + I Sbjct: 73 VDGFYSFISIPQTRKGYSGVGCWIRIPEKNHPLYHALQVVKAEEGITGYLTIKNGKHSAI 132 Query: 109 GNLYLPHGNPITSTKYD 125 + D Sbjct: 133 SYRNDVNQGIGGYDSLD 149 >gi|3746499|gb|AAD02928.1| reverse transcriptase [Oryzias latipes] Length = 1258 Score = 76.8 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 47/264 (17%), Positives = 95/264 (35%), Gaps = 37/264 (14%) Query: 4 VTVATWNVNSIRARIHN-LAAW-----IKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57 V + T N+N + HN + W +K++ +I+ LQET + L + + Sbjct: 6 VKLLTLNINGL----HNPVKRWKTLSKLKQDKAEIVFLQETHLPEA--EHLKLNKMGFKH 59 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 S ++ + + D + R+I T IN+ + + N+Y+P G+ Sbjct: 60 VFYSSHSSGRRRGVATLIAGAVNYQHVSEYKDKEGRYIMITGKINSILITLLNVYVPPGS 119 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + I I + + ++ + + Sbjct: 120 ---DWSFYRHIFEIISTKSQGTLICGGDFNIVLNNSLDSS------------NGKGDYRK 164 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 ++ ++ MG D R + T Y+ + + +++S R+D+I + + Sbjct: 165 IGKKMRHLMEEMGIVDVWRENNPTKREYTHYSHPHNAYS-----RLDYIFMFKNDLLRVK 219 Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261 ++ I G SDH PV VSL Sbjct: 220 NSDI-----GICAISDHNPVTVSL 238 >gi|269862096|ref|XP_002650703.1| exodeoxyribonuclease III [Enterocytozoon bieneusi H348] gi|220065747|gb|EED43354.1| exodeoxyribonuclease III [Enterocytozoon bieneusi H348] Length = 239 Score = 76.8 bits (187), Expect = 3e-12, Method: Composition-based stats. Identities = 33/227 (14%), Positives = 70/227 (30%), Gaps = 18/227 (7%) Query: 40 TEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF 99 D++ +++ + + ++ + V + + + + + + Sbjct: 4 CSDESLIEAVMETYDKLTDVLNKEQHPVVILCGDMNATYSMCDNYLYMREYEQLHYVSEW 63 Query: 100 TINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159 +++ + + G T Y + + ++E ++ + Sbjct: 64 SMSIDHISKVENPIQRGKLHTRDFYMKLQMSSENGIYTEKVAPRIDELPVYFLTKYDLYD 123 Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK 219 W + F D R + Y+ WD N Sbjct: 124 HFMEKRQRQWLANLMK--------------TFVDTFRIGNKELFQYTCWDRVLRHRESNL 169 Query: 220 GIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEP 266 G RID+I+L + + SA I G SDH PV + +DI EP Sbjct: 170 GTRIDYILLKTTSHYKIKSAEIRPDIYG----SDHCPVTLEIDIGEP 212 >gi|254564561|ref|XP_002489391.1| Class II abasic (AP) endonuclease involved in repair of DNA damage [Pichia pastoris GS115] gi|238029187|emb|CAY67107.1| Class II abasic (AP) endonuclease involved in repair of DNA damage [Pichia pastoris GS115] gi|328349821|emb|CCA36221.1| AP endonuclease 2 [Pichia pastoris CBS 7435] Length = 520 Score = 76.8 bits (187), Expect = 4e-12, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 25/71 (35%), Gaps = 4/71 (5%) Query: 196 RATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHT 255 Y+ W+ ++ N G RID I+ S + I G SDH Sbjct: 289 EHHGRVMRSYTVWNTLKNTRPLNIGSRIDLILCSTALLNKFKKCEILPWLMG----SDHC 344 Query: 256 PVIVSLDIPEP 266 PVI + E Sbjct: 345 PVIADFEPDES 355 Score = 47.9 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 23/64 (35%), Gaps = 8/64 (12%) Query: 4 VTVATWNVNSIRA--------RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55 V T+NVN + ++ + DII LQE K + N E + NY Sbjct: 16 VRFVTFNVNGTKTLCNYHPWNKMKSFDKIFGYLFADIITLQELKVQKDNLDHELNEIPNY 75 Query: 56 HIET 59 Sbjct: 76 RSFV 79 >gi|254993711|ref|ZP_05275901.1| 3'-exo-deoxyribonuclease exoA [Listeria monocytogenes FSL J2-064] Length = 48 Score = 76.4 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 4/51 (7%) Query: 213 DSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 ++ ++N G RID+ ++S L A+I G SDH PV + L++ Sbjct: 2 NARARNTGWRIDYFVVSERLKDKLVDAKIHADVLG----SDHCPVELELNL 48 >gi|269862537|ref|XP_002650877.1| exodeoxyribonuclease III [Enterocytozoon bieneusi H348] gi|220065478|gb|EED43178.1| exodeoxyribonuclease III [Enterocytozoon bieneusi H348] Length = 239 Score = 76.4 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 34/194 (17%), Positives = 67/194 (34%), Gaps = 8/194 (4%) Query: 73 KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIK 132 + P+ I+ + ++ + ++ + H + + + +K+ Sbjct: 27 EQHPVVILCGDMNATYSMCDNYLYMREYEQLHYVSEWSMSIDHISKVENPTQREKLHTRD 86 Query: 133 RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192 +++ E I+ Y ++ F + ++ + F Sbjct: 87 FYMKLQ----MSSENGIYTEKVAPRIDELPVYFLTKYDLYDHFMEKRQRQWLANLMKTFV 142 Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPS 252 D R + Y+ WD N G RID+I+L + + SA I G S Sbjct: 143 DTFRVGNKELFQYTCWDRVLRHRESNLGTRIDYILLKTTSHYKIKSAEIRPDIYG----S 198 Query: 253 DHTPVIVSLDIPEP 266 DH PV + +DI EP Sbjct: 199 DHCPVTLEIDIGEP 212 >gi|269864233|ref|XP_002651501.1| exodeoxyribonuclease III [Enterocytozoon bieneusi H348] gi|220064406|gb|EED42554.1| exodeoxyribonuclease III [Enterocytozoon bieneusi H348] Length = 226 Score = 76.4 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 34/194 (17%), Positives = 67/194 (34%), Gaps = 8/194 (4%) Query: 73 KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIK 132 + P+ I+ + ++ + ++ + H + + + +K+ Sbjct: 14 EQHPVVILCGDMNATYSMCDNYLYMREYEQLHYVSEWSMSIDHISKVENPTQREKLHTRD 73 Query: 133 RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192 +++ E I+ Y ++ F + ++ + F Sbjct: 74 FYMKLQ----MSSENGIYTEKVAPRIDELPVYFLTKYDLYDHFMEKRQRQWLANLMKTFV 129 Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPS 252 D R + Y+ WD N G RID+I+L + + SA I G S Sbjct: 130 DTFRVGNKELFQYTCWDRVLRHRESNLGTRIDYILLKTTSHYKIKSAEIRPDIYG----S 185 Query: 253 DHTPVIVSLDIPEP 266 DH PV + +DI EP Sbjct: 186 DHCPVTLEIDIGEP 199 >gi|3746502|gb|AAD02930.1| reverse transcriptase [Oryzias latipes] Length = 1258 Score = 76.4 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 47/264 (17%), Positives = 94/264 (35%), Gaps = 37/264 (14%) Query: 4 VTVATWNVNSIRARIHN-LAAW-----IKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57 V + T N+N + HN + W +K++ +I+ LQET + L + + Sbjct: 6 VKLLTLNINGL----HNPVKRWKTLSKLKQDKAEIVFLQETHLPEA--EHLKLNKMGFKH 59 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 S + + + D + R+I T IN+ + + N+Y+P G+ Sbjct: 60 VFYSSHSSGRRRGGATLIAGAVNYQHVSEYKDKEGRYIMITGKINSILITLLNVYVPPGS 119 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + I I + + ++ + + Sbjct: 120 ---DWSFYRHIFEIISTKSQGTLICGGDFNIVLNNSLDSS------------NGKGDYRK 164 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 ++ ++ MG D R + T Y+ + + +++S R+D+I + + Sbjct: 165 IGKKMRHLMEEMGIVDVWRENNPTKREYTHYSHPHNAYS-----RLDYIFMFKNDLLRVK 219 Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261 ++ I G SDH PV VSL Sbjct: 220 NSDI-----GICAISDHNPVTVSL 238 >gi|296804272|ref|XP_002842988.1| ap endonuclease [Arthroderma otae CBS 113480] gi|238845590|gb|EEQ35252.1| ap endonuclease [Arthroderma otae CBS 113480] Length = 574 Score = 76.4 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 27/68 (39%), Gaps = 4/68 (5%) Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253 +Y+ W+ ++ N G RID+I+ S + + I G SD Sbjct: 229 CREFHPHRTGMYTCWEQRVNARPGNYGSRIDYILCSDDIRHWFVESNIQEGLMG----SD 284 Query: 254 HTPVIVSL 261 H PV S+ Sbjct: 285 HCPVYASI 292 >gi|147919376|ref|YP_686888.1| hypothetical protein RCIX2491 [uncultured methanogenic archaeon RC-I] gi|110622284|emb|CAJ37562.1| hypothetical protein RCIX2491 [uncultured methanogenic archaeon RC-I] Length = 317 Score = 76.4 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 45/281 (16%), Positives = 85/281 (30%), Gaps = 30/281 (10%) Query: 2 SVVTVATWNVNS-----IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56 +++ + +WNV + A++ +K PD++ LQE + E L++ Y+ Sbjct: 26 NIMRLISWNVMGGYGGHMSAQVEQ----LKNLQPDVVALQEVTAKTAPTYREQLKAAGYY 81 Query: 57 IETCGQKS-YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 +S + S I + P ++ ++ + L H Sbjct: 82 SIVDSFQSVKYLTRLRSNSFGELIASRWPLISSPLKFDVPWPEKVLSCFIIGPWGDVLLH 141 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 I S Y++ + + + P I GD++ + + W Sbjct: 142 TAHIPSGDYNNVKKIETLEGIYKALANPAQYPRILCGDFSTPQEELPDGRIVTWGQKRKR 201 Query: 176 TLEVRQSFQKLQ--------------NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI 221 T E+ Q D R + YS ++ + G Sbjct: 202 TGEIVLQKYWGQRWDTGERNILEKLSEYDLVDVYRKLYLNRPEYSLYETTDGQRT---GR 258 Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 R DH+ S R R K S H+ + V Sbjct: 259 RYDHVFASESLNP--VECRYLHYLR-EKKLSGHSAIEVEFK 296 >gi|50308837|ref|XP_454423.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49643558|emb|CAG99510.1| KLLA0E10473p [Kluyveromyces lactis] Length = 499 Score = 76.4 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 31/80 (38%), Gaps = 4/80 (5%) Query: 200 DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 D +Y+ W+ ++ N G R+D+I +S + I T G SDH PV Sbjct: 292 DRLKMYTVWNTLLNTRPVNYGSRVDYIFVSKGLKDNITDGDILTTIMG----SDHCPVFA 347 Query: 260 SLDIPEPRKKQQDSTSQNMK 279 + + K + + Sbjct: 348 DIKVDNLELKHESFNKPKFE 367 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 32/84 (38%), Gaps = 10/84 (11%) Query: 4 VTVATWNVNSIR--------ARIHNLAAW-IKENNPDIICLQETKTEDKNFPFETLQSLN 54 V T+NVN +R +R++N + DI+ LQE K + K+ + + Sbjct: 10 VRFVTFNVNGVRTLFQHYPFSRMNNSLKLAFELFQADIVTLQELKIDAKSI-SKWGKVEG 68 Query: 55 YHIETCGQKSYNGVAILSKYQPIE 78 Y + G + + + Sbjct: 69 YQSYITISQKRKGYSGVGCWIRTP 92 >gi|147919368|ref|YP_686896.1| endonuclease/exonuclease [uncultured methanogenic archaeon RC-I] gi|110622292|emb|CAJ37570.1| predicted endonuclease/exonuclease [uncultured methanogenic archaeon RC-I] Length = 294 Score = 76.4 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 43/302 (14%), Positives = 90/302 (29%), Gaps = 47/302 (15%) Query: 1 MSV-----VTVATWNVN--SI------------RARIHNLAAWIKENNPDIICLQETKTE 41 MS+ + + +WN+ I R + + I +PD+I LQE + Sbjct: 1 MSLVRSDRIRLLSWNICFGGIGAGRTGYDPITSRENLRGIVRAILGKSPDVIVLQEYRDA 60 Query: 42 DK--NFPFETLQSLNYHIETCGQK----------SYNGVAILSKYQPIEIVTHLPGDDLD 89 ++ L+ Y + N + + D Sbjct: 61 EETGGVIKAGLREAGYTCHSSNPGLDKNGILIALGRNLTDMYAVSPAASFKVDTRRLDEI 120 Query: 90 VQARFIEATFTINTQTLRIGNLYLPH-------GNPITSTKYDDKISWIKRFLRFASQRL 142 + R+ + + +++P G K + +A ++L Sbjct: 121 YRYRWANLGLKSQGMSFELLGIHIPDVRPGRKGGPETFVRSIGHKQLIWDALIEYAREKL 180 Query: 143 ELEEPLIFAGDYNIIPQ-PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT 201 + I AGD+N +N + R + + Sbjct: 181 KTGSEAIIAGDFNTGLNAEDRSHNTDSYYLSDRMAYLKRLKNSHGEGLADAWRKFHPEPG 240 Query: 202 HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 Y++ + N+G R+D++ L+P L + R + SDH+ V+ + Sbjct: 241 PEDYTW-------FLGNRGFRLDYVFLTPGLGKRLSGVEYSHEER-VSGLSDHSMVLADI 292 Query: 262 DI 263 + Sbjct: 293 RL 294 >gi|289672874|ref|ZP_06493764.1| exodeoxyribonuclease III Xth [Pseudomonas syringae pv. syringae FF5] Length = 57 Score = 76.4 bits (186), Expect = 4e-12, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%) Query: 4 VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 + + + NVN I+A + L +W++ N D+ICLQ+T+ Q Y + Sbjct: 1 MRIISVNVNGIQAAVERGLLSWLQAQNADVICLQDTRASTFELDDPAFQLDGYFLY 56 >gi|150007859|ref|YP_001302602.1| hypothetical protein BDI_1219 [Parabacteroides distasonis ATCC 8503] gi|255013440|ref|ZP_05285566.1| hypothetical protein B2_06000 [Bacteroides sp. 2_1_7] gi|298376780|ref|ZP_06986735.1| transmembrane endonuclease/exonuclease/phosphatase [Bacteroides sp. 3_1_19] gi|149936283|gb|ABR42980.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503] gi|298266658|gb|EFI08316.1| transmembrane endonuclease/exonuclease/phosphatase [Bacteroides sp. 3_1_19] Length = 353 Score = 76.4 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 48/265 (18%), Positives = 87/265 (32%), Gaps = 27/265 (10%) Query: 4 VTVATWNVNSIRA----RIHNLAAWIKENNPDIICLQETKTEDK---NFPFETLQSLNYH 56 V V T+NVN+ ++ N+A W+++ +PDI+CLQE E + +TL L Y+ Sbjct: 100 VKVITYNVNNFNTDGKKQLPNIADWLRKEDPDIVCLQECPVESALRMDSVAKTLSFLPYY 159 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 T G AI SKY I+ + + + A I ++R+ N + Sbjct: 160 CSTRSATKAAGNAIFSKYP---ILRFESILYPESSNKSLFAVMDIQGDSVRVFNNHFQTT 216 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + + + L + + + E Sbjct: 217 SVNAVKPRLYQAHAEGKQLEETEAAFHMAFQMKKNFVKRATQADYIRQMLDAGEGPVIIC 276 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHH---LYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 + + + Y+F + RID+I+ SP+ Sbjct: 277 GDFNDTPASYTYRTVKGDLTDGFRDCGSGFGYTF-------RQLKRIFRIDYIIYSPDFK 329 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVI 258 + + + SDH PV+ Sbjct: 330 GVTYDS-------PNLDYSDHKPVV 347 >gi|225465549|ref|XP_002274515.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 944 Score = 76.4 bits (186), Expect = 5e-12, Method: Composition-based stats. Identities = 34/263 (12%), Positives = 79/263 (30%), Gaps = 33/263 (12%) Query: 1 MSVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 M+ + + +WNV + R+ + + I+ D+ CLQETK + E ++SL Sbjct: 1 MN-LRILSWNVRGVNDRLKRKIIKSVIRSQKVDLFCLQETKVQV--MSDEMVRSLG---- 53 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + + I + G+ Sbjct: 54 ------SGRYIDWKVLNAKGTAGGVIICWDKRSLEILGVEEG----QFSISCRFRNEGDG 103 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + + + EE G + +N ++ +D T Sbjct: 104 AIW-----VFTGVYGPFSREDREGLWEELGAIRGLWEEPWCLGGDFNITLYIDDRNRTGR 158 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 + + ++ + + +++ + + R+D + +P Sbjct: 159 ITSAMRRFAQIIDELGLVDIPLQGGSFTW----SGGLNNQTRARLDRFLATPCWLDQF-- 212 Query: 239 ARIDTKPRGWTKP-SDHTPVIVS 260 +R+ R +P SDH P+++ Sbjct: 213 SRVLN--RRLPRPTSDHYPILLE 233 >gi|145346298|ref|XP_001417629.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144577856|gb|ABO95922.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 474 Score = 76.0 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 47/293 (16%), Positives = 74/293 (25%), Gaps = 43/293 (14%) Query: 21 LAAWIKENNPD--IICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIE 78 + A D +ICLQETK + + +S N S Sbjct: 1 MKALFDALGSDLKVICLQETKLSSSGDVERLERVEGWDGAHAVCESSNHRVGYSGVAVYW 60 Query: 79 IVT-----------------HLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 A F + L++ G + Sbjct: 61 RSNEICPTSIERGVCAKGDAGESTMWAGEIAPFADDATRAKEIDGEGRALWVDFGEFVLC 120 Query: 122 TKY------------------DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 T Y K ++ E +I GD+NI P Sbjct: 121 TVYVPAVFGDPAVDEKTAERAAFKRDFLSALEARYKSLRERGRNVILCGDWNIAPSWKLD 180 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIR 222 +L D R T ++ W+ + + N G R Sbjct: 181 RADEDPNAVEPRNPSRDWLAAQLAGDAMVDVFREFFPTLGDAFTCWNVASGAQLSNYGSR 240 Query: 223 IDHIMLSPEAT-SLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDST 274 ID+ + T + + K G SDH PV + L+ R++ T Sbjct: 241 IDYFLCDRAVTLKRVRGVGVAQKFEG----SDHAPVYLELEESMWRRRDSQQT 289 >gi|262381640|ref|ZP_06074778.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|262296817|gb|EEY84747.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] Length = 353 Score = 76.0 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 48/265 (18%), Positives = 87/265 (32%), Gaps = 27/265 (10%) Query: 4 VTVATWNVNSIRA----RIHNLAAWIKENNPDIICLQETKTEDK---NFPFETLQSLNYH 56 V V T+NVN+ ++ N+A W+++ +PDI+CLQE E + +TL L Y+ Sbjct: 100 VKVITYNVNNFNTDGKKQLPNIADWLRKEDPDIVCLQECPVESALRMDSVAKTLSFLPYY 159 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 T G AI SKY I+ + + + A I ++R+ N + Sbjct: 160 CSTRSATKAAGNAIFSKYP---ILRFESILYPESSNKSLFAVMDIQGDSVRVFNNHFQTT 216 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + + + L + + + E Sbjct: 217 SVNAVKPRLYQAHAEGKQLEETEAAFHMAFQMKKNFVKRATQADYIRQMLDAGEGPVIIC 276 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHH---LYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 + + + Y+F + RID+I+ SP+ Sbjct: 277 GDFNDTPASYTYRTVKGDLTDGFRDCGSGFGYTF-------RQLKRIFRIDYIIYSPDFK 329 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVI 258 + + + SDH PV+ Sbjct: 330 GVTYDS-------PNLDYSDHKPVV 347 >gi|300707896|ref|XP_002996140.1| hypothetical protein NCER_100801 [Nosema ceranae BRL01] gi|239605413|gb|EEQ82469.1| hypothetical protein NCER_100801 [Nosema ceranae BRL01] Length = 414 Score = 76.0 bits (185), Expect = 5e-12, Method: Composition-based stats. Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 4/97 (4%) Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + + + DA R H + Y+ W+ + +N G RID+I++ + + + + Sbjct: 313 WMLKFILELSHIDAFRLFHTGYEKYTCWNIQLNLRPRNLGSRIDYILIPIKFYNRIMFSD 372 Query: 241 IDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQN 277 I+ G SDH PV V+L++ K S+N Sbjct: 373 IENHVYG----SDHCPVYVNLNLETVDDKDNICKSKN 405 Score = 60.2 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 34/181 (18%), Positives = 61/181 (33%), Gaps = 20/181 (11%) Query: 4 VTVATWNVNSIRARIHNLAAWIKEN-------------NPDIICLQETKTEDKNFPFETL 50 + + ++NVN I + +IK+N DI+CLQE K K+ E Sbjct: 1 MKIISFNVNGI----KSFDKFIKQNYNLSFNDYLLKIMKADILCLQEIKCTKKDM--EEF 54 Query: 51 QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 +L T + I + + ++ V + + + +I N Sbjct: 55 STLK-DFITLTNFNQKTNGIYGVSTFVSKRLYCRRHNISVPYSEYGRSLLTDHKNFKILN 113 Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170 LY P +P + + I + + F S+ +L F Y+I Sbjct: 114 LYCPFYDPNGNKTKESVIKFYRDIYNFISKYDDLIVLGDFNATYSIFDHYIYYNEFKKNY 173 Query: 171 N 171 N Sbjct: 174 N 174 >gi|301310113|ref|ZP_07216052.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 20_3] gi|300831687|gb|EFK62318.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 20_3] Length = 353 Score = 76.0 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 48/265 (18%), Positives = 87/265 (32%), Gaps = 27/265 (10%) Query: 4 VTVATWNVNSIRA----RIHNLAAWIKENNPDIICLQETKTEDK---NFPFETLQSLNYH 56 V V T+NVN+ ++ N+A W+++ +PDI+CLQE E + +TL L Y+ Sbjct: 100 VKVITYNVNNFNTDGKKQLPNIADWLRKEDPDIVCLQECPVESALRMDSLAKTLSFLPYY 159 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 T G AI SKY I+ + + + A I ++R+ N + Sbjct: 160 CSTRSATKAAGNAIFSKYP---ILRFESILYPESSNKSLFAVMDIQGDSVRVFNNHFQTT 216 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + + + L + + + E Sbjct: 217 SVNAVKPRLYQAHAEGKQLEETEAAFHMAFQMKKNFVKRATQADYIRQMLDAGEGPVILC 276 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHH---LYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 + + + Y+F + RID+I+ SP+ Sbjct: 277 GDFNDTPASYTYRTVKGDLTDGFRDCGSGFGYTF-------RQLKRIFRIDYIIYSPDFK 329 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVI 258 + + + SDH PV+ Sbjct: 330 GVTYDS-------PNLDYSDHKPVV 347 >gi|256840117|ref|ZP_05545626.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|256739047|gb|EEU52372.1| conserved hypothetical protein [Parabacteroides sp. D13] Length = 353 Score = 76.0 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 48/265 (18%), Positives = 87/265 (32%), Gaps = 27/265 (10%) Query: 4 VTVATWNVNSIRA----RIHNLAAWIKENNPDIICLQETKTEDK---NFPFETLQSLNYH 56 V V T+NVN+ ++ N+A W+++ +PDI+CLQE E + +TL L Y+ Sbjct: 100 VKVITYNVNNFNTDGKKQLPNIADWLRKEDPDIVCLQECPVESALRMDSVAKTLSFLPYY 159 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 T G AI SKY I+ + + + A I ++R+ N + Sbjct: 160 CSTRSATKAAGNAIFSKYP---ILRFESILYPESSNKSLFAVMDIQGDSVRVFNNHFQTT 216 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + + + L + + + E Sbjct: 217 SVNAVKPRLYQAHAEGKQLEETEAAFHMAFQMKKNFVKRATQADYIRQMLDAGEGPVILC 276 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHH---LYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 + + + Y+F + RID+I+ SP+ Sbjct: 277 GDFNDTPASYTYRTVKGDLTDGFRDCGSGFGYTF-------RQLKRIFRIDYIIYSPDFK 329 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVI 258 + + + SDH PV+ Sbjct: 330 GVTYDS-------PNLDYSDHKPVV 347 >gi|302919090|ref|XP_003052788.1| hypothetical protein NECHADRAFT_78136 [Nectria haematococca mpVI 77-13-4] gi|256733728|gb|EEU47075.1| hypothetical protein NECHADRAFT_78136 [Nectria haematococca mpVI 77-13-4] Length = 653 Score = 76.0 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 26/71 (36%), Gaps = 4/71 (5%) Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 + + + + WD ++ N G RID+I+ S + I G Sbjct: 272 WDLCRCFHPERAGMNTCWDTKRNTRPANNGSRIDYILCSDGIKDWFTFSNIQEGLMG--- 328 Query: 251 PSDHTPVIVSL 261 SDH PV + Sbjct: 329 -SDHCPVFATF 338 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 17/79 (21%), Positives = 25/79 (31%), Gaps = 24/79 (30%) Query: 5 TVATWN----------------VNSIRA-------RIHN-LAAWIKENNPDIICLQETKT 40 + TWN VN IR R A DI+ +QETK Sbjct: 4 RLTTWNGETPLKLQDSPAYTFTVNGIRNPFGYQPWREKRTFQAMFDILEADIVVMQETKI 63 Query: 41 EDKNFPFETLQSLNYHIET 59 + K+ E + + + Sbjct: 64 QRKDLHDEMVLVPGWDVFF 82 >gi|14578320|gb|AAF99486.1| PV1H14200_P [Plasmodium vivax] Length = 540 Score = 76.0 bits (185), Expect = 6e-12, Method: Composition-based stats. Identities = 57/353 (16%), Positives = 93/353 (26%), Gaps = 97/353 (27%) Query: 5 TVATWNVNSIRARIHN------LAAWIKENNPDIICLQETKT------------------ 40 T+ TWN+NSI R N ++ N D++C QE + Sbjct: 167 TIVTWNMNSITVRYKNKDKWNAFMSFFNRINADVLCFQEVRLPALNLCAVKNSKEGKRDR 226 Query: 41 -------EDKNFPFET--------LQSLN-YHIETCGQKSYNGVAILSKYQPIEIVTHLP 84 + F+ + N Y + S V I I +L Sbjct: 227 GKVKNTDQKSQVDFDIMSKILKKDFHNYNAYFSLANIKYSGQLVLIKRNIPVKSIRYNLR 286 Query: 85 GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL 144 D + + + Y P+ + K++ + + ++ +F S + Sbjct: 287 LDADPSEHHEEGRVIIAEFSKFYLLSTYTPNNGF-DTVKFERRRLFDEQLKKFVSHLRNM 345 Query: 145 EEPLIFAGDYNIIPQPH---DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT 201 + LI+ GD NI P+ + V Q I + D Sbjct: 346 GKNLIWTGDLNIAPEDIDLSHPAEFRRMKKGNVPKEFVGQPGCTDFERKNFMGILSAGDL 405 Query: 202 HHLYSFWDYYADSW-------SKNKG------------------------------IR-- 222 Y + NKG R Sbjct: 406 VDSYRQLAGKGKAKKGEASKGETNKGETSKGGSCNGGSCNGAATNGAPDINDNIYTWRCP 465 Query: 223 ------------IDHIMLSPEATSLLHSARID--TKPRGWTKPSDHTPVIVSL 261 IDH ++S + S I + SDH PVI+ L Sbjct: 466 FLMGKSCNKAMRIDHFIVSRGFMPNVQSVDIHGYSVFHKNFYGSDHCPVILHL 518 >gi|325094515|gb|EGC47825.1| conserved hypothetical protein [Ajellomyces capsulatus H88] Length = 636 Score = 75.6 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 27/69 (39%), Gaps = 4/69 (5%) Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253 + D +Y+ W+ ++ N G RID+++ ++ I G SD Sbjct: 263 CRKYHPDRLGMYTCWEQRVNARPGNYGARIDYVLCDRSMQDWFSASNIQEGLMG----SD 318 Query: 254 HTPVIVSLD 262 H PV L Sbjct: 319 HCPVYAELK 327 Score = 63.7 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 31/87 (35%), Gaps = 8/87 (9%) Query: 3 VVTVATWNVNSIRA-------RIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 +V + TWNVN IR R A DI+ QETK + K+ + + Sbjct: 1 MVRLTTWNVNGIRNPFSYHPWREKRSFEAMFDALEADIVIFQETKIQRKDLQDDMVLVNG 60 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVT 81 + K G + + Y I Sbjct: 61 WDCFFSLPKYKKGYSGVVIYTRNSICC 87 >gi|240275156|gb|EER38671.1| conserved hypothetical protein [Ajellomyces capsulatus H143] Length = 636 Score = 75.6 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 27/69 (39%), Gaps = 4/69 (5%) Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253 + D +Y+ W+ ++ N G RID+++ ++ I G SD Sbjct: 263 CRKYHPDRLGMYTCWEQRVNARPGNYGARIDYVLCDRSMQDWFSASNIQEGLMG----SD 318 Query: 254 HTPVIVSLD 262 H PV L Sbjct: 319 HCPVYAELK 327 Score = 63.7 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 31/87 (35%), Gaps = 8/87 (9%) Query: 3 VVTVATWNVNSIRA-------RIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 +V + TWNVN IR R A DI+ QETK + K+ + + Sbjct: 1 MVRLTTWNVNGIRNPFSYHPWREKRSFEAMFDALEADIVIFQETKIQRKDLQDDMVLVNG 60 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVT 81 + K G + + Y I Sbjct: 61 WDCFFSLPKYKKGYSGVVIYTRNSICC 87 >gi|225558763|gb|EEH07047.1| DNA lyase Apn2 [Ajellomyces capsulatus G186AR] Length = 636 Score = 75.6 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 27/69 (39%), Gaps = 4/69 (5%) Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253 + D +Y+ W+ ++ N G RID+++ ++ I G SD Sbjct: 263 CRKYHPDRLGMYTCWEQRVNARPGNYGARIDYVLCDRSMQDWFSASNIQEGLMG----SD 318 Query: 254 HTPVIVSLD 262 H PV L Sbjct: 319 HCPVYAELK 327 Score = 63.7 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 31/87 (35%), Gaps = 8/87 (9%) Query: 3 VVTVATWNVNSIRA-------RIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 +V + TWNVN IR R A DI+ QETK + K+ + + Sbjct: 1 MVRLTTWNVNGIRNPFSYHPWREKRSFEAMFDALEADIVIFQETKIQRKDLQDDMVLVNG 60 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVT 81 + K G + + Y I Sbjct: 61 WDCFFSLPKYKKGYSGVVIYTRNSICC 87 >gi|327306001|ref|XP_003237692.1| DNA lyase [Trichophyton rubrum CBS 118892] gi|326460690|gb|EGD86143.1| DNA lyase [Trichophyton rubrum CBS 118892] Length = 603 Score = 75.6 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 27/68 (39%), Gaps = 4/68 (5%) Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253 +Y+ W+ ++ N G RID+I+ S S + I G SD Sbjct: 259 CREFHPGRTGMYTCWNQKVNARPGNYGSRIDYILCSDNIRSWFVESNIQEGLMG----SD 314 Query: 254 HTPVIVSL 261 H PV S+ Sbjct: 315 HCPVYASI 322 Score = 52.1 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 22/65 (33%), Gaps = 8/65 (12%) Query: 3 VVTVATWNVNSIRARI--------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 V+ + TWNVN IR DI+ QE K + K+ + + Sbjct: 2 VLRLTTWNVNGIRNPFSYEPWRGNRTFGTMFDILEADIVVFQEAKIQRKDLQDDMVLVSG 61 Query: 55 YHIET 59 + Sbjct: 62 WDCYF 66 >gi|253573925|ref|ZP_04851267.1| endonuclease/exonuclease/phosphatase [Paenibacillus sp. oral taxon 786 str. D14] gi|251846402|gb|EES74408.1| endonuclease/exonuclease/phosphatase [Paenibacillus sp. oral taxon 786 str. D14] Length = 258 Score = 75.6 bits (184), Expect = 8e-12, Method: Composition-based stats. Identities = 44/267 (16%), Positives = 74/267 (27%), Gaps = 27/267 (10%) Query: 5 TVATWNV------NSIRA---RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55 + T+N+ + A R +A IK ++ DII +QE D E L Sbjct: 4 KIMTFNLRLNVASDGENAWPYRTKAVAEVIKRHDADIIGIQE-GLHDMLTDLEPLLPEYA 62 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 I + G Y+ G + + +T R+ Sbjct: 63 WIGEGREGGNKGEYAAILYKKKNWTVGKAGHFSLSETPEELGARSWSTSHPRMCTWVTFK 122 Query: 116 GNP-ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ-PHDCYNPIIWENDA 173 ++ + I + L E F + D Sbjct: 123 SQTGAEFAAFNTHLDHISEEAQQKGMELIRERMKEFRTQTGLPVVLTGDFNVEPANAVIT 182 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 E ++ + + H S G ID+I +SP+ Sbjct: 183 GLEQEGYRNAYSVLQQEKKEVGATVHHFLGGES-------------GEPIDYIFVSPDL- 228 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVS 260 + + R+D + PSDH PVI Sbjct: 229 -QIQNVRVDRELYEGRYPSDHYPVIAE 254 >gi|254518532|ref|ZP_05130588.1| endonuclease/exonuclease/phosphatase [Clostridium sp. 7_2_43FAA] gi|226912281|gb|EEH97482.1| endonuclease/exonuclease/phosphatase [Clostridium sp. 7_2_43FAA] Length = 265 Score = 75.2 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 45/269 (16%), Positives = 79/269 (29%), Gaps = 21/269 (7%) Query: 4 VTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 + V T+N+ N R + + N+ DII +QE +K F + ++ Sbjct: 1 MKVMTFNLRTDFLLDINNRWNKRKEIVYDILNNNDCDIIGVQE--LNNKMFKDISKEAPG 58 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 Y+I S + + I + + + + + Sbjct: 59 YNII----GSPRSLKYFIERNDILVSKKHKILEYSTFWLSEDPEKIGSAIWYSVYPRICT 114 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 + D I + E L G+Y D Y I D Sbjct: 115 TALIRLN---DGNIVRVYNTHLDFLLSKAREYGLKKIGEYMDKQHEKDNYPAI-LMGDFN 170 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 + + + + A D + KG+ ID+I ++ E Sbjct: 171 ASPTSKAIKNFSEGKYSSKKFIAVQDHKKEIYNMSTMSKFKGNKKGLHIDYIFVTEEF-- 228 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + I + PSDH P+I LDI Sbjct: 229 KVLDTEILEYNKNGKYPSDHYPMIAKLDI 257 >gi|322709548|gb|EFZ01124.1| DNA lyase [Metarhizium anisopliae ARSEF 23] Length = 608 Score = 75.2 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 5/71 (7%) Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 D R H + + + WD ++ N G RID+I+ S A I G Sbjct: 232 WDLCRCFHPSRLGMNTCWDTKKNTRPANNGSRIDYILCSNGIRDWFTWANIQEGLMG--- 288 Query: 251 PSDHTPVIVSL 261 SDH PV ++ Sbjct: 289 -SDHCPVFATI 298 >gi|226294616|gb|EEH50036.1| DNA-(apurinic or apyrimidinic site) lyase [Paracoccidioides brasiliensis Pb18] Length = 621 Score = 75.2 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 27/69 (39%), Gaps = 4/69 (5%) Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253 D +Y+ W+ ++ N G RID+++ S ++ I G SD Sbjct: 258 CREYHPDRRGMYTCWEQRVNARPGNYGSRIDYVLCSLIMRDWFCASNIQEGLMG----SD 313 Query: 254 HTPVIVSLD 262 H PV + Sbjct: 314 HCPVYADIK 322 >gi|295663072|ref|XP_002792089.1| DNA-(apurinic or apyrimidinic site) lyase [Paracoccidioides brasiliensis Pb01] gi|226279264|gb|EEH34830.1| DNA-(apurinic or apyrimidinic site) lyase [Paracoccidioides brasiliensis Pb01] Length = 570 Score = 75.2 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 27/69 (39%), Gaps = 4/69 (5%) Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253 D +Y+ W+ ++ N G RID+++ S ++ I G SD Sbjct: 201 CREYHPDRRGMYTCWEQRVNARPGNYGSRIDYVLCSLIMRDWFCASNIQEGLMG----SD 256 Query: 254 HTPVIVSLD 262 H PV + Sbjct: 257 HCPVYADIK 265 >gi|225685280|gb|EEH23564.1| DNA-(apurinic or apyrimidinic site) lyase [Paracoccidioides brasiliensis Pb03] Length = 510 Score = 75.2 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 27/69 (39%), Gaps = 4/69 (5%) Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253 D +Y+ W+ ++ N G RID+++ S ++ I G SD Sbjct: 147 CREYHPDRRGMYTCWEQRVNARPGNYGSRIDYVLCSLIMRDWFCASNIQEGLMG----SD 202 Query: 254 HTPVIVSLD 262 H PV + Sbjct: 203 HCPVYADIK 211 >gi|50290925|ref|XP_447895.1| hypothetical protein [Candida glabrata CBS 138] gi|49527206|emb|CAG60844.1| unnamed protein product [Candida glabrata] Length = 505 Score = 75.2 bits (183), Expect = 9e-12, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 4/64 (6%) Query: 200 DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 D +Y+ W+ ++ N G RID I++S + + + A I G SDH PV Sbjct: 301 DRLKMYTVWNTLKNTRPSNFGSRIDFILVSKDLGNNIEKADILPDING----SDHCPVFC 356 Query: 260 SLDI 263 +++ Sbjct: 357 DINL 360 Score = 44.4 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 21/51 (41%), Gaps = 15/51 (29%) Query: 4 VTVATWNVNSIRA------------RIHNLAAWIKENNPDIICLQETKTED 42 + T+NVN +R + ++ W + D+I QE KTE Sbjct: 12 IRFVTFNVNGVRTFFHYAPFSEMRQSLRSVFDWFES---DVITFQELKTEP 59 >gi|227202652|dbj|BAH56799.1| AT4G36050 [Arabidopsis thaliana] Length = 409 Score = 75.2 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 38/114 (33%), Gaps = 30/114 (26%) Query: 198 THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE-------------ATSLLHSARIDTK 244 + ++ W + + N G RIDHI+++ + I T+ Sbjct: 38 HPERKDAFTCWSSSSGAEQFNYGSRIDHILVAGSCLHQDEDKQGHSFLACHVKECDILTE 97 Query: 245 ---------PRGWT-------KPSDHTPVIVSL-DIPEPRKKQQDSTSQNMKPI 281 P W K SDH PV +S D+P+ + + P+ Sbjct: 98 YKRFKNENMPTRWKGGLVTKFKGSDHVPVFISFDDLPDIPEHSTPPLASRYLPM 151 >gi|22329202|ref|NP_195329.2| endonuclease/exonuclease/phosphatase family protein [Arabidopsis thaliana] gi|17064948|gb|AAL32628.1| putative protein [Arabidopsis thaliana] gi|20259962|gb|AAM13328.1| putative protein [Arabidopsis thaliana] Length = 408 Score = 75.2 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 38/114 (33%), Gaps = 30/114 (26%) Query: 198 THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE-------------ATSLLHSARIDTK 244 + ++ W + + N G RIDHI+++ + I T+ Sbjct: 38 HPERKDAFTCWSSSSGAEQFNYGSRIDHILVAGSCLHQDEDKQGHSFLACHVKECDILTE 97 Query: 245 ---------PRGWT-------KPSDHTPVIVSL-DIPEPRKKQQDSTSQNMKPI 281 P W K SDH PV +S D+P+ + + P+ Sbjct: 98 YKRFKNENMPTRWKGGLVTKFKGSDHVPVFISFDDLPDIPEHSTPPLASRYLPM 151 >gi|255945069|ref|XP_002563302.1| Pc20g07790 [Penicillium chrysogenum Wisconsin 54-1255] gi|211588037|emb|CAP86108.1| Pc20g07790 [Penicillium chrysogenum Wisconsin 54-1255] Length = 655 Score = 75.2 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 31/87 (35%), Gaps = 4/87 (4%) Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253 +Y+ WD ++ N G RID+++ S + I G SD Sbjct: 280 CRSFHPHRTGMYTCWDQKLNARPGNYGSRIDYVLCSLHMQDWFSDSNIQEGLMG----SD 335 Query: 254 HTPVIVSLDIPEPRKKQQDSTSQNMKP 280 H PV + R + + + + P Sbjct: 336 HCPVYAVIKESVNRPEGEVNIRDILNP 362 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 23/63 (36%), Gaps = 8/63 (12%) Query: 5 TVATWNVNSIRARI--------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56 + TWNVN IR + DI+ LQETK + K+ + + + Sbjct: 4 RITTWNVNGIRNPFSYEPWRGTRTFESMFDTLEADIVILQETKIQRKDLRDDMVLVPGWD 63 Query: 57 IET 59 Sbjct: 64 CYF 66 >gi|156056543|ref|XP_001594195.1| hypothetical protein SS1G_04002 [Sclerotinia sclerotiorum 1980] gi|154701788|gb|EDO01527.1| hypothetical protein SS1G_04002 [Sclerotinia sclerotiorum 1980 UF-70] Length = 501 Score = 75.2 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 5/73 (6%) Query: 191 FTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT 249 D R H +++ W+ ++ N G RID+I+ S + + I G Sbjct: 228 MWDVCRGFHPARKKMFTCWEQKKNARPGNFGSRIDYILCSEDRKEWFQESNIQEGLMG-- 285 Query: 250 KPSDHTPVIVSLD 262 SDH PV +L Sbjct: 286 --SDHCPVFATLK 296 Score = 39.0 bits (89), Expect = 0.75, Method: Composition-based stats. Identities = 10/62 (16%), Positives = 25/62 (40%), Gaps = 3/62 (4%) Query: 19 HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIE 78 + ++ DI+ +QETK + K+ + + + + K G + ++ Y Sbjct: 3 KTMFDILET---DILVMQETKIQRKDLRDDMVLVSGWDVFFSLPKHKKGYSGVAIYTRNS 59 Query: 79 IV 80 + Sbjct: 60 VC 61 >gi|146318325|ref|YP_001198037.1| exonuclease III [Streptococcus suis 05ZYH33] gi|145689131|gb|ABP89637.1| Exonuclease III [Streptococcus suis 05ZYH33] Length = 168 Score = 75.2 bits (183), Expect = 1e-11, Method: Composition-based stats. Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 10/165 (6%) Query: 100 TINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159 T+ + +Y P+ D +I ++ +L+ +P++ GDYN+ + Sbjct: 9 TLEFDDFYVTQVYTPNAGDGLKRLADRQIWDVQ--YADYLAKLDSHKPVLATGDYNVAHK 66 Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSK 217 D NP FT E RQ F L GFTD R H D + Y++W + S Sbjct: 67 EIDLANPASNRQSPGFTDEERQGFTNLLAKGFTDTFRHLHGDVLNAYTWWAQRSRTSKIN 126 Query: 218 NKGIRIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSL 261 N G RID+ ++S + + ID+ R DHTP+++ + Sbjct: 127 NTGWRIDYWLVSDRIADKVSKSDMIDSGARQ-----DHTPIVMEI 166 >gi|256681296|gb|ACV05011.1| catabolite repression control protein [Pseudomonas aeruginosa] Length = 180 Score = 74.8 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 31/150 (20%), Positives = 56/150 (37%), Gaps = 5/150 (3%) Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI-IWENDA 173 + K ++ F + S++ I+ G + Q D N + Sbjct: 31 PSGQSGDESLNQKFKFMDDFTHYLSKQRRKRREYIYCGSLYVAHQKMDVKNWRECQQMPG 90 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 E + N+G+ DA+R +S+W + N G R D+ +L+P Sbjct: 91 FLAPERAWLDEVFGNLGYADALREVSREGDQFSWWPDSEQAEMLNLGWRFDYQVLTPGLR 150 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + +A++ +PR S H P+IV D Sbjct: 151 RFVRNAKLPRQPR----FSQHAPLIVDYDW 176 >gi|269861776|ref|XP_002650574.1| exodeoxyribonuclease III [Enterocytozoon bieneusi H348] gi|269867018|ref|XP_002652463.1| exodeoxyribonuclease III [Enterocytozoon bieneusi H348] gi|220062443|gb|EED41593.1| exodeoxyribonuclease III [Enterocytozoon bieneusi H348] gi|220065939|gb|EED43484.1| exodeoxyribonuclease III [Enterocytozoon bieneusi H348] Length = 151 Score = 74.8 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 28/117 (23%), Positives = 43/117 (36%), Gaps = 4/117 (3%) Query: 150 FAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWD 209 + Y ++ F + ++ + F D R + Y+ WD Sbjct: 12 YTEKVAPRIDELPVYFLTKYDLYDHFMEKRQRQWLANLMKTFVDTFRIGNKELFQYTCWD 71 Query: 210 YYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEP 266 N G RID+I+L + + SA I G SDH PV + +DI EP Sbjct: 72 RVLRHRESNLGTRIDYILLKTTSHYKIKSAEIRPDIYG----SDHCPVTLEIDIGEP 124 >gi|242813026|ref|XP_002486082.1| DNA lyase Apn2 [Talaromyces stipitatus ATCC 10500] gi|218714421|gb|EED13844.1| DNA lyase Apn2 [Talaromyces stipitatus ATCC 10500] Length = 642 Score = 74.8 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 26/72 (36%), Gaps = 4/72 (5%) Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 +Y+ W+ ++ N G RID+I+ S + A I G Sbjct: 272 HDICRSFHPGRRGMYTCWETRVNARPGNYGARIDYILSSLDMKDWWSEANIQEGLMG--- 328 Query: 251 PSDHTPVIVSLD 262 SDH PV + Sbjct: 329 -SDHCPVYATFK 339 Score = 39.0 bits (89), Expect = 0.67, Method: Composition-based stats. Identities = 12/61 (19%), Positives = 21/61 (34%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80 A DI+ QETK + K+ + + + + G + + Y E Sbjct: 45 FNAMFDILEADIVIFQETKIQRKDLRDDMVLVPGWDCYFSLPRHKKGYSGVVIYTRNETC 104 Query: 81 T 81 T Sbjct: 105 T 105 >gi|269865638|ref|XP_002651994.1| exodeoxyribonuclease III [Enterocytozoon bieneusi H348] gi|220063354|gb|EED42062.1| exodeoxyribonuclease III [Enterocytozoon bieneusi H348] Length = 151 Score = 74.8 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 28/117 (23%), Positives = 43/117 (36%), Gaps = 4/117 (3%) Query: 150 FAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWD 209 + Y ++ F + ++ + F D R + Y+ WD Sbjct: 12 YTEKVAPRIDELPVYFLTKYDLYDHFMEKRQRQWLANLMKTFVDTFRVGNKELFQYTCWD 71 Query: 210 YYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEP 266 N G RID+I+L + + SA I G SDH PV + +DI EP Sbjct: 72 RVLRHRESNLGTRIDYILLKTTSHYKIKSAEIRPDIYG----SDHCPVTLEIDIGEP 124 >gi|262196690|ref|YP_003267899.1| endonuclease/exonuclease/phosphatase [Haliangium ochraceum DSM 14365] gi|262080037|gb|ACY16006.1| Endonuclease/exonuclease/phosphatase [Haliangium ochraceum DSM 14365] Length = 285 Score = 74.8 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 37/280 (13%), Positives = 77/280 (27%), Gaps = 17/280 (6%) Query: 4 VTVATWNVNS----IRARIHNLAAWIKENNPDIICLQETK-TEDKNFPFETL-QSLNYHI 57 + V T N+ + R+ A ++ D++ LQE + D L ++L + Sbjct: 1 MRVVTLNLWGTTPPLATRLALAAEQLRALAVDVVALQEVRHAGDGRTTAAHLAEALGFQH 60 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTH---LPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 + + + R + T+ + + + Sbjct: 61 HYAAAVRWTAEDWPEDVPGAGAGEEGLAILSRHGLAECRALALPEARPTEARILLSAAID 120 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 + L Q L ++ L C + + Sbjct: 121 APAGRCWVHTTHLHYALDDGLARERQVLAIDHALRACAAEEPAAVHILCGDFNAEPDSDE 180 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK---NKGIRIDHIMLSPE 231 + F DA H ++ + ++ ++ R+D+I +S Sbjct: 181 MRFLRGLCTLAGRRSYFQDAFAHRHPGEDGVTWCTERGAARARRSMDRDRRLDYIYVSKR 240 Query: 232 ATS---LLHSARIDTKPRGWT-KPSDHTPVIVSLDI-PEP 266 + AR+ R SDH V+ + I P P Sbjct: 241 QRDGRGTVREARVVLGGRSGEVAASDHYGVLADVQIAPAP 280 >gi|254580459|ref|XP_002496215.1| ZYRO0C13222p [Zygosaccharomyces rouxii] gi|238939106|emb|CAR27282.1| ZYRO0C13222p [Zygosaccharomyces rouxii] Length = 500 Score = 74.8 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 6/79 (7%) Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS-- 260 +Y+ W+ + +S N G RID ++ S + SA I + G SDH PV Sbjct: 304 KMYTVWNTFKNSRPANYGSRIDFVLTSTRMGVQVQSANILPQVMG----SDHCPVYADII 359 Query: 261 LDIPEPRKKQQDSTSQNMK 279 D + +K D + + Sbjct: 360 YDPSDVGEKDFDVKTPKFE 378 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 22/93 (23%), Positives = 30/93 (32%), Gaps = 17/93 (18%) Query: 5 TVATWNVNSIRA------------RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52 T+NVN +R I N+ + N DII QE K E Sbjct: 17 RFLTFNVNGLRTLFHYQPFSNMNQSIENVFDYF---NADIITFQELKVERSALTKWGKLD 73 Query: 53 LNYHIETCGQKS--YNGVAILSKYQPIEIVTHL 83 Y + Q Y+GV + P + H Sbjct: 74 NFYSFISIPQARKGYSGVGCWIRILPKDHPLHN 106 >gi|83593356|ref|YP_427108.1| endonuclease/exonuclease/phosphatase [Rhodospirillum rubrum ATCC 11170] gi|83576270|gb|ABC22821.1| Endonuclease/exonuclease/phosphatase [Rhodospirillum rubrum ATCC 11170] Length = 246 Score = 74.8 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 42/264 (15%), Positives = 84/264 (31%), Gaps = 38/264 (14%) Query: 3 VVTVATWNV--NSIRARIHNLAAWIKENNPDIICLQETKTED-KNFPFETLQSLN--YHI 57 ++ V WN+ R R+ + I + PD++ L E + + L+ + Y Sbjct: 11 LIRVVCWNILHGGGR-RVDAILTRIVRHRPDVLILTEFRNDASGQRLRAGLRDIGLWYEH 69 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 K+ NGV I ++ + LD R L + +Y+P G Sbjct: 70 FVPTHKTSNGVLIAARDYVDAVQ------PLDTTVRKPHLLLEGLVAGLSVIGVYMPMGE 123 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 T + +R + F + Sbjct: 124 AKTPYWEAVVAAARRREASPTLVIGDFNTGKHFIDEKGTSLV------------------ 165 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 +++ GF D RA + ++++ + + + R+DH SP + + Sbjct: 166 -SAPFMNRMEEAGFVDLWRARNPEGREFTWFSHKGNGF------RLDHAFASPSLAARVT 218 Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261 R + SDH+ +I+ + Sbjct: 219 DVFYSHAER-LDRISDHSALILDI 241 >gi|281346665|gb|EFB22249.1| hypothetical protein PANDA_000067 [Ailuropoda melanoleuca] Length = 343 Score = 74.8 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 47/264 (17%), Positives = 82/264 (31%), Gaps = 32/264 (12%) Query: 18 IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPI 77 H +A WIK ++P I CLQET E K+ ++ + G + GVAIL + Sbjct: 3 RHRVADWIKRHDPSICCLQETHFEPKDAFRLRVRGWSTIFHANGPQKKAGVAILISDRLD 62 Query: 78 EIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF 137 + + + I + ++ + Sbjct: 63 F--------------KLEAIERDTEGHYIILKGSIQQVDMTIINIYAPNRGAARYTSQLL 108 Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA 197 + +++ + GD N D E + L + D R Sbjct: 109 TKIKRHIDKNTVIVGDLNTPLSEIDRTPWQKLSK------ESKALNAILDELDLIDIYRT 162 Query: 198 THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257 H YSF+ ++S RIDH + S I SDH + Sbjct: 163 LHPRTKEYSFYSNAHGTFS-----RIDHALGHKTGLSQYQKIEIIPCI-----FSDHNAL 212 Query: 258 IVSLDIPEPRKKQQDSTSQNMKPI 281 + L+ K ++S + ++ I Sbjct: 213 KLELN--HKEKPGRNSNTWRLRTI 234 >gi|281345771|gb|EFB21355.1| hypothetical protein PANDA_015321 [Ailuropoda melanoleuca] Length = 341 Score = 74.8 bits (182), Expect = 1e-11, Method: Composition-based stats. Identities = 47/264 (17%), Positives = 82/264 (31%), Gaps = 32/264 (12%) Query: 18 IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPI 77 H +A WIK ++P I CLQET E K+ ++ + G + GVAIL + Sbjct: 1 RHRVADWIKRHDPSICCLQETHFEPKDAFRLRVRGWSTIFHANGPQKKAGVAILISDRLD 60 Query: 78 EIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF 137 + + + I + ++ + Sbjct: 61 F--------------KLEAIERDTEGHYIILKGSIQQVDMTIINIYAPNRGAARYTSQLL 106 Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA 197 + +++ + GD N D E + L + D R Sbjct: 107 TKIKRHIDKNTVIVGDLNTPLSEIDRTPWQKLSK------ESKALNAILDELDLIDIYRT 160 Query: 198 THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257 H YSF+ ++S RIDH + S I SDH + Sbjct: 161 LHPRTKEYSFYSNAHGTFS-----RIDHALGHKTGLSQYQKIEIIPCI-----FSDHNAL 210 Query: 258 IVSLDIPEPRKKQQDSTSQNMKPI 281 + L+ K ++S + ++ I Sbjct: 211 KLELN--HKEKPGRNSNTWRLRTI 232 >gi|16904257|gb|AAL30837.1|AF440399_1 DNA lyase [Mycosphaerella graminicola] Length = 491 Score = 74.4 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 4/71 (5%) Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 + +Y+ WD ++ N G RID ++++ S + A I G Sbjct: 135 WDTTRGFHPTRRGMYTHWDTKKNARPGNSGSRIDFVLVADVMQSWVKDANIQEGLLG--- 191 Query: 251 PSDHTPVIVSL 261 SDH PV Sbjct: 192 -SDHCPVYADF 201 >gi|16904254|gb|AAL30835.1|AF440398_3 DNA lyase-like protein [Mycosphaerella graminicola] Length = 594 Score = 74.4 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 4/71 (5%) Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 + +Y+ WD ++ N G RID ++++ S + A I G Sbjct: 252 WDTTRGFHPTRRGMYTHWDTKKNARPGNSGSRIDFVLVADVMQSWVKDANIQEGLLG--- 308 Query: 251 PSDHTPVIVSL 261 SDH PV Sbjct: 309 -SDHCPVYADF 318 Score = 58.3 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 27/67 (40%), Gaps = 14/67 (20%) Query: 4 VTVATWNVNSIR----------AR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52 + + TWNVN IR R ++ ++ DI+ +QE K + K+ + + Sbjct: 1 MRLTTWNVNGIRNPFSYPPWNNTRSFKSMFDILES---DIVVMQELKIQKKDLRDDMVLV 57 Query: 53 LNYHIET 59 + Sbjct: 58 DGWDCYF 64 >gi|82913353|ref|XP_728609.1| endonuclease/exonuclease/phosphatase [Plasmodium yoelii yoelii str. 17XNL] gi|23485048|gb|EAA20174.1| Endonuclease/Exonuclease/phosphatase family [Plasmodium yoelii yoelii] Length = 245 Score = 74.4 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 47/258 (18%), Positives = 79/258 (30%), Gaps = 32/258 (12%) Query: 6 VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + N+N + + I L W+ + +P CLQET +K+ + ++ + G K Sbjct: 17 LISLNINGLNSPIKRHRLTNWLHKQDPTFCCLQETHLREKDRHYLRIKGWKTIFQANGMK 76 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 GVAIL + + I L I + Sbjct: 77 KQAGVAILISDKIDFQPK--------------VIKKDKEGHFVLIKGKILQEELSILNIY 122 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + + + + I GD+N P D D EV + Sbjct: 123 APNTRAATFIKETLVKLKAHIAPHTIIVGDFNTPLSPMDRSWKQKLNRDTLKLTEVMKQM 182 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 TD R + Y+F+ ++SK IDHI+ + + I Sbjct: 183 ------DLTDIYRTFYPKTKGYTFFSAPHGTFSK-----IDHIIGHKTGLNRFKNIEIVP 231 Query: 244 KPRGWTKPSDHTPVIVSL 261 SDH + L Sbjct: 232 CIL-----SDHHALRADL 244 >gi|194376980|dbj|BAG63051.1| unnamed protein product [Homo sapiens] Length = 347 Score = 74.4 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 23/148 (15%), Positives = 43/148 (29%), Gaps = 18/148 (12%) Query: 145 EEPLIFAGDYNIIPQPHDCY-----------NPIIWENDACFTLEVRQSFQKLQNMGFTD 193 +I GD N +P D + W + L + + + Sbjct: 18 GSHVIILGDLNTAHRPIDHWDAVNLECFEEDPGRKWMDSLLSNLGCQSASHVGPFIDSYR 77 Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT-SLLHSARIDTKPRGWTKPS 252 + ++ W + N G R+D+++ ++ + + G S Sbjct: 78 CFQP--KQEGAFTCWSAVTGARHLNYGSRLDYVLGDRTLVIDTFQASFLLPEVMG----S 131 Query: 253 DHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 DH PV L + KQ P Sbjct: 132 DHCPVGAVLSVSSVPAKQCPPLCTRFLP 159 >gi|119613616|gb|EAW93210.1| APEX nuclease (apurinic/apyrimidinic endonuclease) 2, isoform CRA_c [Homo sapiens] gi|221045760|dbj|BAH14557.1| unnamed protein product [Homo sapiens] Length = 347 Score = 74.4 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 23/148 (15%), Positives = 43/148 (29%), Gaps = 18/148 (12%) Query: 145 EEPLIFAGDYNIIPQPHDCY-----------NPIIWENDACFTLEVRQSFQKLQNMGFTD 193 +I GD N +P D + W + L + + + Sbjct: 18 GSHVIILGDLNTAHRPIDHWDAVNLECFEEDPGRKWMDSLLSNLGCQSASHVGPFIDSYR 77 Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT-SLLHSARIDTKPRGWTKPS 252 + ++ W + N G R+D+++ ++ + + G S Sbjct: 78 CFQP--KQEGAFTCWSAVTGARHLNYGSRLDYVLGDRTLVIDTFQASFLLPEVMG----S 131 Query: 253 DHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 DH PV L + KQ P Sbjct: 132 DHCPVGAVLSVSSVPAKQCPPLCTRFLP 159 >gi|299471767|emb|CBN76988.1| ARP; DNA-(apurinic or apyrimidinic site) lyase [Ectocarpus siliculosus] Length = 479 Score = 74.4 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 4/70 (5%) Query: 198 THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT--SLLHSARIDTKPRGWTKPSDHT 255 ++S+W A + N+G+R+D+ + S +H A + R SDH Sbjct: 408 HPKVTGVFSYWSVRARNRPVNRGMRLDYCLASRGLVGGDGVHDAFVLD--RDTVGVSDHC 465 Query: 256 PVIVSLDIPE 265 PV V L + + Sbjct: 466 PVGVVLRLGD 475 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 6/44 (13%) Query: 4 VTVATWNVNSIRARI------HNLAAWIKENNPDIICLQETKTE 41 + V +WNVN IRA++ L I + P ++ LQE +T Sbjct: 127 LRVLSWNVNGIRAQMDKEEGRKALQGIIAQERPHVLGLQEIRTS 170 >gi|119613614|gb|EAW93208.1| APEX nuclease (apurinic/apyrimidinic endonuclease) 2, isoform CRA_a [Homo sapiens] Length = 294 Score = 74.4 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 15/96 (15%), Positives = 27/96 (28%), Gaps = 5/96 (5%) Query: 186 LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT-SLLHSARIDTK 244 ++ W + N G R+D+++ ++ + + Sbjct: 15 HVGPFIDSYRCFQPKQEGAFTCWSAVTGARHLNYGSRLDYVLGDRTLVIDTFQASFLLPE 74 Query: 245 PRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 G SDH PV L + KQ P Sbjct: 75 VMG----SDHCPVGAVLSVSSVPAKQCPPLCTRFLP 106 >gi|121704746|ref|XP_001270636.1| ap endonuclease [Aspergillus clavatus NRRL 1] gi|119398782|gb|EAW09210.1| ap endonuclease [Aspergillus clavatus NRRL 1] Length = 620 Score = 74.4 bits (181), Expect = 2e-11, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 26/72 (36%), Gaps = 4/72 (5%) Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 F + +Y+ W+ ++ N G RID+++ S + I G Sbjct: 244 FDICRSFHPERRGMYTCWEQRINARPGNYGSRIDYVLCSLNTQDWFCDSNIQEGLMG--- 300 Query: 251 PSDHTPVIVSLD 262 SDH PV Sbjct: 301 -SDHCPVYAVFK 311 Score = 39.0 bits (89), Expect = 0.75, Method: Composition-based stats. Identities = 10/61 (16%), Positives = 23/61 (37%), Gaps = 3/61 (4%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80 + ++ DI+ QETK + K+ + + + K+ G + ++ Y Sbjct: 20 MFDILE---ADIVVFQETKIQRKDLRDDMVLVPGWDCYFSLPKAKKGYSGVAIYTRNATC 76 Query: 81 T 81 Sbjct: 77 C 77 >gi|316994995|gb|ADU79051.1| DNA lyase [Mycosphaerella graminicola] Length = 492 Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 4/71 (5%) Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 + +Y+ WD ++ N G RID ++++ S + A I G Sbjct: 135 WDTTRGFHPARRGMYTHWDTKKNARPGNSGSRIDFVLVADVMQSWVKDANIQEGLLG--- 191 Query: 251 PSDHTPVIVSL 261 SDH PV Sbjct: 192 -SDHCPVYADF 201 >gi|165874707|gb|ABY68236.1| DNA lyase [Beauveria caledonica] Length = 559 Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 5/70 (7%) Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 D R H T +++ WD + N G RID+I+ S S + I G Sbjct: 220 WDICRCFHPTRLGMHTCWDAKRKTRPANVGSRIDYILCSDGLKSWFVESNIQEGLMG--- 276 Query: 251 PSDHTPVIVS 260 SDH PV + Sbjct: 277 -SDHCPVYAT 285 Score = 37.1 bits (84), Expect = 2.8, Method: Composition-based stats. Identities = 9/51 (17%), Positives = 20/51 (39%) Query: 30 PDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80 DI+ +QETK + K+ + + + + G + ++ Y Sbjct: 3 ADIVIMQETKIQRKDLQDDMVLVPGWDAYFSLPQQKKGYSGVAIYTRNATC 53 >gi|291513858|emb|CBK63068.1| Exonuclease III [Alistipes shahii WAL 8301] Length = 318 Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 40/269 (14%), Positives = 69/269 (25%), Gaps = 27/269 (10%) Query: 3 VVTVATWNV----------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52 + ++N+ N N W+KE +PD + L E + Sbjct: 52 TLRFISYNILEGMKLDKAQN-----FDNFVDWVKEKDPDFMALCECNAFTEESLTALAGR 106 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 + ++S V + SKY L L A I + + +LY Sbjct: 107 YGHPYAILCKESGFPVGLTSKYPIELRNRLLEDVPLWHGAIHTR----IKDINVVVLHLY 162 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 P ++ R + P+ + + + Sbjct: 163 PFGTYPNGQGAAGTGNTYRDREINCILDSTIRRYPVEPLWLMAGDFNSYSPKDADAMPAN 222 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 F + + H Y+ RID I S Sbjct: 223 TYFETHSIVLKSGYCDALRDRHSQFFHTVPTPYNGESTADQ-------RRIDFIYASQAV 275 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + +RI T SDH PV++ Sbjct: 276 MREITDSRIIYDEFTAT-HSDHYPVMIEF 303 >gi|189467306|ref|ZP_03016091.1| hypothetical protein BACINT_03694 [Bacteroides intestinalis DSM 17393] gi|189435570|gb|EDV04555.1| hypothetical protein BACINT_03694 [Bacteroides intestinalis DSM 17393] Length = 293 Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 41/273 (15%), Positives = 72/273 (26%), Gaps = 26/273 (9%) Query: 5 TVATWNV------NSIRARIHNLAAWIKENNPDIICLQET---KTEDKNFPFETLQSL-N 54 + ++N+ +S+R W KEN DI+ L E K D E L +L Sbjct: 28 KITSYNIWDGFDKDSLR--YERFVEWAKENEADILVLTELVGFKAHD----LEILGNLCG 81 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 Y ++ + ++SK + + G + I T + Sbjct: 82 YMHTALQKEDGYPLGVMSKTPIEVVCRRMEGFWHGMLHVRTAGIDVIATHLSPFDWKFRQ 141 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLE---LEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 + + D + E NI + Sbjct: 142 KEAKMIISYVDSLKLEDYFVAGDFNAISPLDADEIITHKTWIRNIKRGDASRPAYNNLND 201 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADS---WSKNKGIRIDHIML 228 + + +R S + Y + R+D+I++ Sbjct: 202 GKFDLSVISSFLAAGMDDPIGRLVRPAEKRMTHPSAFRYRWKVEDERLPDLRSRLDYILV 261 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 SP I SDH PV + L Sbjct: 262 SPSLMHRC----ILGVVERLEGISDHYPVSIVL 290 >gi|147814926|emb|CAN70311.1| hypothetical protein VITISV_022886 [Vitis vinifera] Length = 1856 Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 30/260 (11%), Positives = 71/260 (27%), Gaps = 32/260 (12%) Query: 4 VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + TWNV ++ + +I+ D++C+QETK ++ Sbjct: 891 MKIITWNVRGANDSSKRKIIXNYIRNQRVDLMCIQETKIQE------------------- 931 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 G+ L + + G L Sbjct: 932 --MSEGIVRSLGSGRFLDWRALNAEGAAGGILICWDKRVLEILDWEEGQFSLSCRFKTIE 989 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + + + EE G ++ +N +++++ Sbjct: 990 NGATWVFTGVYGPFTKVEREGMWEELGAIRGLWDDPWCLGGDFNITLFQHERSSQRRTSS 1049 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSAR 240 + ++ + +++ N+ R+D ++SP Sbjct: 1050 AMRRFAEFVDDLELVDLPLQGGEFTW-----SGGLNNQAWARLDRFLVSPSWLDQFSGV- 1103 Query: 241 IDTKPRGWTKPSDHTPVIVS 260 T+ R SDH P+++ Sbjct: 1104 --TQGRLSRPTSDHFPIVLE 1121 >gi|301628947|ref|XP_002943610.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like [Xenopus (Silurana) tropicalis] Length = 155 Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 3/102 (2%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFP--FETLQSLNYHIET 59 + + + N+N IR+ L W+ PD IC+QE K + + FE L L H Sbjct: 5 LFKLTSLNLNGIRSATSKGLHDWVAAEQPDCICVQEIKAQATDMAGRFEQLAGLTGHFHF 64 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI 101 +K Y+GV I +++ P +I+T + D + R++E F Sbjct: 65 AEKKGYSGVGIYTRHPPSDIITGFGPAEFDTEGRYVELRFDT 106 >gi|152965406|ref|YP_001361190.1| endonuclease/exonuclease/phosphatase [Kineococcus radiotolerans SRS30216] gi|151359923|gb|ABS02926.1| Endonuclease/exonuclease/phosphatase [Kineococcus radiotolerans SRS30216] Length = 291 Score = 74.1 bits (180), Expect = 2e-11, Method: Composition-based stats. Identities = 46/280 (16%), Positives = 91/280 (32%), Gaps = 22/280 (7%) Query: 4 VTVATWNVN---S-IRARIHNLAAWIKENNPDIICLQETKTED-KNFPFETLQSLNYHIE 58 + V TWN+ RAR + A + + PD++ LQE ++ +N + L H+ Sbjct: 12 LRVMTWNLWWRFGDWRARREAILAVLAQERPDVVGLQEVWADEGENLAQWLGERLGMHVA 71 Query: 59 TCG---QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + + + P + G+ + + ++ Sbjct: 72 WSPSPAPQRWRRRLAWNGEDPAVVDGLQFGNAVLSRHPLLDQEVRELPGGGDEDEGRTAL 131 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP--IIWENDA 173 + + + + A + +E+ + + Y P N Sbjct: 132 KVLVDAPRRPLPFTTTHLNSSPAESAVRVEQVRALVPFVVGGHRRGEHYPPVLTGDFNAV 191 Query: 174 CFTLEVRQSFQKLQNMGFT-----DAIRATHDTHHLYSFWDYYAD--SWSKNKGIRIDHI 226 + E+R + L D+ R ++ WD + RIDH+ Sbjct: 192 AESDELRLAGGYLTPGPVPGVVLVDSWRFAAPDDPGFT-WDRRNPFVARVHQPSARIDHV 250 Query: 227 MLS-PEAT--SLLHSAR-IDTKPRGWTKPSDHTPVIVSLD 262 ++ P T + R + T+P G SDH V+V L+ Sbjct: 251 LVGLPPFTGEGSVRDVRLVATEPVGGVWASDHAAVVVDLE 290 >gi|3073779|dbj|BAA25763.1| reverse transcriptase [Chlorella vulgaris] Length = 1309 Score = 73.7 bits (179), Expect = 2e-11, Method: Composition-based stats. Identities = 39/287 (13%), Positives = 79/287 (27%), Gaps = 36/287 (12%) Query: 4 VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETK--TEDKNFPFETLQSLNYHIET 59 + + + NVN +R R L ++ + DII LQET + ++ + + Sbjct: 9 LRLLSLNVNGLRDRDKRRCLFNLLERDRWDIILLQETHHSSTEEGTAWAQEGPAG--VRC 66 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN-- 117 S+ + + ++ + R T + Sbjct: 67 NWSGPAFWCHFTSQSRGVAVLLRPTASTAAITVRHCSTTGRTLLVDFTYCGQPYTVASVY 126 Query: 118 --PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + + + L A L + AG ++ W Sbjct: 127 APAAAADRQQYYTQELLPSLPAARCLLVGGDFNCIAGQQDMAAGQPGQRTHGYWTGLRLV 186 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E D R + + ++ S + R+D ++S + Sbjct: 187 ETE----------HQLYDVWRDLNPSSRAFTHVATTGQSAA-----RLDRWLVSETLRAR 231 Query: 236 LHSARIDTKPRG----WTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278 + +PR P DH + VSL + P S + + Sbjct: 232 VS-----REPRAIGQVLGYPGDH--LGVSLSLTAPASTLYGSAAWRL 271 >gi|119493288|ref|XP_001263834.1| DNA lyase, putative [Neosartorya fischeri NRRL 181] gi|119411994|gb|EAW21937.1| DNA lyase, putative [Neosartorya fischeri NRRL 181] Length = 622 Score = 73.7 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 25/72 (34%), Gaps = 4/72 (5%) Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 F +Y+ W+ + N G RID+++ S + + I G Sbjct: 247 FDICRSFHPGRRGMYTCWEQRIIARPGNYGSRIDYVLCSLDMQDWFSDSNIQEGLMG--- 303 Query: 251 PSDHTPVIVSLD 262 SDH PV Sbjct: 304 -SDHCPVYAVFK 314 Score = 39.8 bits (91), Expect = 0.46, Method: Composition-based stats. Identities = 10/61 (16%), Positives = 20/61 (32%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80 + DI+ QETK + K+ + + + K+ G + + Y Sbjct: 20 FESMFDILEADIVVFQETKIQRKDLRDDMVLVPGWDCYFSLPKTKKGYSGVVIYTRNATC 79 Query: 81 T 81 Sbjct: 80 C 80 >gi|301121913|ref|XP_002908683.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262099445|gb|EEY57497.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 388 Score = 73.7 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 48/292 (16%), Positives = 85/292 (29%), Gaps = 34/292 (11%) Query: 4 VTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQE-TKTEDKNFPFETLQSL 53 + + T+N+ NS R R ++A I +P I+ QE K + L+SL Sbjct: 111 LKIMTFNLRFAGTGDGLNSWRYRKDHVADIIDRYHPAIMGTQEGLKAQ-----LAELESL 165 Query: 54 NYHIETCGQKSYNGVAILSKYQPI--EIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 H + + G+ + T + +R+ Sbjct: 166 LNHPYERFGVEREENGEFEQIFYDAAVLERLDDGNFWLSEEPDTPGTQGWDAACVRMVTW 225 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 G + + + + E L++A I Sbjct: 226 ----GKFRLRATQQELFVFNTQLDHVGPKSREEGSKLLWARIQQISGDAPFFLMGDFNTY 281 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG----IR----I 223 T S + + A Y+ Y+ + KN G +R I Sbjct: 282 RHTSTYSYFTSQEGGPQLREAWPEAAKQIGDVSYT---YHGWAGVKNDGEKTAVRAANHI 338 Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTS 275 D I P+ + + + T+ R PSDH P+ L P P + + Sbjct: 339 DWIFYRPQM--KVLATEVITEDRKGRYPSDHYPIQAELLFPSPAELPPPGAN 388 >gi|16124778|ref|NP_419342.1| hypothetical protein CC_0523 [Caulobacter crescentus CB15] gi|221233494|ref|YP_002515930.1| endonuclease/exonuclease/phosphatase family protein [Caulobacter crescentus NA1000] gi|13421706|gb|AAK22510.1| conserved hypothetical protein [Caulobacter crescentus CB15] gi|220962666|gb|ACL94022.1| endonuclease/exonuclease/phosphatase family protein [Caulobacter crescentus NA1000] Length = 259 Score = 73.7 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 44/277 (15%), Positives = 81/277 (29%), Gaps = 45/277 (16%) Query: 1 MSVVTVATWNVNSIR-------ARIHNLAAWIKENNPDIICLQE-------TKTEDKNFP 46 M + T+NV+ R + +A I PD++ LQE T++ D+ Sbjct: 1 MKTFRLMTYNVH--RCVGTDRKLDVERVAEVIAAERPDVVALQELDVGRARTQSVDQAHR 58 Query: 47 FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 L +++H E G L + +E + + Sbjct: 59 LAELLKMSFHFHPAMAVEEELYGDAILTALPERRIKAQGLPLYRRVPGLEPRGALWIEVE 118 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 G + + K P + GD+N P Sbjct: 119 VGGAKVQIINTHLGLVPQEQKRQAAALLGPEWIGEEAWRAPGVLLGDFNATPYSATYRML 178 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226 DA + + + AT + + +RIDH+ Sbjct: 179 RTALRDA-----------QAPSPAWLRPATATFPSSFPF---------------MRIDHV 212 Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 ++ + S+ D + R SDH P+++ L+I Sbjct: 213 FVTKGLETRAVSSPYDARAR---IASDHLPLVIDLEI 246 >gi|134079677|emb|CAK97103.1| unnamed protein product [Aspergillus niger] Length = 572 Score = 73.7 bits (179), Expect = 3e-11, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 25/69 (36%), Gaps = 4/69 (5%) Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 +Y+ W+ ++ N G RID+++ S + + I G Sbjct: 244 HDICRSFHPGRKGMYTCWEQRINARPGNYGSRIDYVLCSLDMQEWFCDSNIQEGLMG--- 300 Query: 251 PSDHTPVIV 259 SDH PV Sbjct: 301 -SDHCPVYA 308 Score = 39.0 bits (89), Expect = 0.84, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 14/42 (33%) Query: 18 IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 A DI+ QETK + K+ + + + Sbjct: 14 KRTFDAMFDILEADIVVFQETKIQRKDLRDDMVLVPGWDCYF 55 >gi|326430263|gb|EGD75833.1| hypothetical protein PTSG_07951 [Salpingoeca sp. ATCC 50818] Length = 377 Score = 73.3 bits (178), Expect = 3e-11, Method: Composition-based stats. Identities = 39/147 (26%), Positives = 59/147 (40%), Gaps = 10/147 (6%) Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI--IWENDACFT 176 I T+ D ++ + L Q LE +P++ GD N+ D YN A T Sbjct: 230 IGLTRLDYRVEEWNQDLLAYVQALEKTKPVLITGDLNVAHLDEDIYNYDAKHIAKVAGCT 289 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT-- 233 R+ F + N GF D R H +++W +KG+R+D+ + S T Sbjct: 290 PREREGFTQFLNEGFVDTFRHLHGNVKGNFTYWSARTHGREHDKGLRLDYFVCSKRMTES 349 Query: 234 -SLLHSARIDTKPRGWTKPSDHTPVIV 259 +H + K G SDH PV Sbjct: 350 LPKVHDSYQLHKVLG----SDHCPVGA 372 Score = 40.2 bits (92), Expect = 0.33, Method: Composition-based stats. Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDI-ICL 35 V + +WNVN +RA + N ++E D+ I L Sbjct: 201 VKILSWNVNGLRAVVRNSLNHLQEL-VDVSIGL 232 >gi|320592520|gb|EFX04950.1| DNA lyase [Grosmannia clavigera kw1407] Length = 795 Score = 73.3 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 26/71 (36%), Gaps = 3/71 (4%) Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 +Y+ WD + N G RID ++ SP LL I + Sbjct: 269 HDACRELHPQRRGMYTCWDTRKNHRPANFGSRIDFVLCSPRLMQLLV---IQADIQPQLL 325 Query: 251 PSDHTPVIVSL 261 SDH PV V L Sbjct: 326 GSDHCPVYVVL 336 Score = 62.5 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 28/82 (34%), Gaps = 8/82 (9%) Query: 7 ATWNVNSIRARIH--------NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 TWNVN IR L A + DI+C QE KT + + + + Sbjct: 12 VTWNVNGIRNPFKYAPWNNDKTLQAMFDRLDADIVCFQEVKTPKPSLTDDLVFIPGWDSF 71 Query: 59 TCGQKSYNGVAILSKYQPIEIV 80 S G + +S Y Sbjct: 72 YSFPHSQTGYSGVSVYTRDSCC 93 >gi|320584151|gb|EFW98362.1| AP endonuclease [Pichia angusta DL-1] Length = 602 Score = 73.3 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 4/76 (5%) Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 +Y+ W + + N G RID I+ S + L+ A I G SDH PV V + Sbjct: 309 KMYTVWSTFKSNRPLNVGSRIDLILASSQLAPLVSQADIWPFLHG----SDHCPVHVDFE 364 Query: 263 IPEPRKKQQDSTSQNM 278 + + ++ S Sbjct: 365 LADLEFSPEEDRSAEY 380 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 24/67 (35%), Gaps = 10/67 (14%) Query: 2 SVVTVATWNVNSIRARIHNLAAW---------IKENNPDIICLQETKTEDKNFPFETLQS 52 + + + T+NVN I+ + N W + N D+I QE K + + Sbjct: 14 TTLRLVTFNVNGIKT-LKNYFPWTLVSNYSQMLNMMNIDVITFQELKVQRPDVDLSIADV 72 Query: 53 LNYHIET 59 Y Sbjct: 73 DGYRSFI 79 >gi|34392586|dbj|BAC82626.1| pol-like protein [Ciona intestinalis] Length = 1263 Score = 73.3 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 46/268 (17%), Positives = 85/268 (31%), Gaps = 26/268 (9%) Query: 4 VTVATWNVNSI---RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 +++ T+NV + R R ++++ DIICLQET T L+ + + + Sbjct: 3 LSLITYNVAGLQNPRKRRSIFY-FLRQKKFDIICLQETHTTASCLRQWELEWVGEILASH 61 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 G GVA+L + + D+ L I + L N Sbjct: 62 GSTKSKGVAVLFSKKLSYSKQDVCVDNFGRYII----------MNLEITDQRLTLCNVYG 111 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + + L Q E I +GD+N + Sbjct: 112 PNQDSPQFYGNLFTLLTKRQAESGIENCIISGDFNCVLNDKLDKTGG--REKHGNRRAKT 169 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 Q + ++ D R H Y+ + R+D ++ + E + Sbjct: 170 TILQAMNDLELYDVFRIKHPNSKQYT----RMQKRP-HTASRLDFVLATSEILQKTTQIQ 224 Query: 241 IDTKPRGWTKPSDHTPVIVSLDIPEPRK 268 I + SDH V + L++ + + Sbjct: 225 IV-----LSTQSDHCIVKLVLNLDKIPR 247 >gi|169595280|ref|XP_001791064.1| hypothetical protein SNOG_00377 [Phaeosphaeria nodorum SN15] gi|111070752|gb|EAT91872.1| hypothetical protein SNOG_00377 [Phaeosphaeria nodorum SN15] Length = 635 Score = 73.3 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 25/69 (36%), Gaps = 4/69 (5%) Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 + D +Y+ W+ ++ N G RID ++ S + I G Sbjct: 254 YDLCREFHPDREGMYTHWEQKINARPGNFGSRIDFVLCSIAIKDWFKDSDIQEGLMG--- 310 Query: 251 PSDHTPVIV 259 SDH PV Sbjct: 311 -SDHCPVYA 318 Score = 64.4 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 31/86 (36%), Gaps = 8/86 (9%) Query: 3 VVTVATWNVNSIR--------ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 +V + TWNVN IR + A D++ +QE K + K+ + + Sbjct: 1 MVRITTWNVNGIRNPFGYKPWSEKRTFNAMFDILEADVVVMQELKIQRKDLTDDMVLVPG 60 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIV 80 + K G + + Y + Sbjct: 61 WDCYFSLPKHKKGYSGVGIYTRQSVC 86 >gi|330920551|ref|XP_003299056.1| hypothetical protein PTT_09967 [Pyrenophora teres f. teres 0-1] gi|311327471|gb|EFQ92889.1| hypothetical protein PTT_09967 [Pyrenophora teres f. teres 0-1] Length = 634 Score = 73.3 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 25/69 (36%), Gaps = 4/69 (5%) Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 + D +++ W+ ++ N G RID I+ S A I G Sbjct: 256 YDLCREFHPDREGMFTHWEQKINARPGNFGSRIDFILCSLAMKDWFKDANIQEGLMG--- 312 Query: 251 PSDHTPVIV 259 SDH PV Sbjct: 313 -SDHCPVYA 320 Score = 61.7 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 31/86 (36%), Gaps = 8/86 (9%) Query: 3 VVTVATWNVNSIR--------ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 +V + TWNVN IR + A DI+ +QE K + K+ + + Sbjct: 1 MVRITTWNVNGIRNPFGYKPWSTTRTFNAMFDILEADIVIMQELKIQRKDLTDDMVLVPG 60 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIV 80 + K G + + Y + Sbjct: 61 WDCYFSLPKHKKGYSGVGIYTRQSVC 86 >gi|146323277|ref|XP_754988.2| DNA lyase Apn2 [Aspergillus fumigatus Af293] gi|129558370|gb|EAL92950.2| DNA lyase Apn2 [Aspergillus fumigatus Af293] gi|159128003|gb|EDP53118.1| DNA lyase Apn2 [Aspergillus fumigatus A1163] Length = 648 Score = 73.3 bits (178), Expect = 4e-11, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 25/72 (34%), Gaps = 4/72 (5%) Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 F +Y+ W+ + N G RID+++ S + + I G Sbjct: 273 FDICRSFHPGRRGMYTCWEQRIIARPGNYGARIDYVLCSLDMQDWFSDSNIQEGLMG--- 329 Query: 251 PSDHTPVIVSLD 262 SDH PV Sbjct: 330 -SDHCPVYAVFK 340 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 31/103 (30%), Gaps = 26/103 (25%) Query: 5 TVATWNVNSIR---------------ARIHNLAAWIKE-----------NNPDIICLQET 38 + TWNVN IR + + + E DI+ QET Sbjct: 4 RITTWNVNGIRNPFSYEPWRGNRTFEVDLPKVLHSLNERLIIEQSMFDILEADIVVFQET 63 Query: 39 KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81 K + K+ + + + K+ G + + Y Sbjct: 64 KIQRKDLRDDMVLVPGWDCYFSLPKTKKGYSGVVIYTRNATCC 106 >gi|308505902|ref|XP_003115134.1| CRE-EXO-3 protein [Caenorhabditis remanei] gi|308259316|gb|EFP03269.1| CRE-EXO-3 protein [Caenorhabditis remanei] Length = 334 Score = 72.9 bits (177), Expect = 4e-11, Method: Composition-based stats. Identities = 34/99 (34%), Positives = 49/99 (49%), Gaps = 1/99 (1%) Query: 142 LELEEPLIFAGDYNIIPQPHDCYNPIIWEND-ACFTLEVRQSFQKLQNMGFTDAIRATHD 200 + ++P+I+ GD N+ D NP N A FT + R F + NMGFTD R H Sbjct: 120 MNEKKPVIYGGDLNVAHNEIDLKNPESNRNKTAGFTDQERGWFTDMLNMGFTDTFRQMHP 179 Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 YSFW Y A+S K+ G R+D+ ++S + Sbjct: 180 ESKKYSFWSYLANSREKDVGWRLDYYVVSNRIMKNVRKC 218 >gi|325119989|emb|CBZ55542.1| hypothetical protein NCLIV_059670 [Neospora caninum Liverpool] Length = 455 Score = 72.9 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 51/303 (16%), Positives = 93/303 (30%), Gaps = 67/303 (22%) Query: 4 VTVATWNVNSIRARIHN------LAAWIKENNPDIICLQETKTED---------KNFPFE 48 +++ TWNVNSI +RI + ++++++ NPDI+CLQE K P + Sbjct: 99 LSIVTWNVNSIASRIRDTRQWFYFSSFLQKVNPDILCLQEVKLAAHGPPGAKRGDGMPRD 158 Query: 49 ---TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT 105 +S + +L ++ + + + R I Sbjct: 159 RSRIKESDKVSSVEAREIREALNTLLPDHKLLISLADWRYSGQMMFIRNDLPEGRIILAE 218 Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH---- 161 + + T + + R +L++PL++ GD N P+ Sbjct: 219 FSPFCVLTTYSPNNGGTPKSFERRRLWD-ERMLEFVTQLKKPLVWVGDLNCAPEDIDLSD 277 Query: 162 ------------DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWD 209 D A T R+ F+ + G+ + Sbjct: 278 PEQFRSVIHESADGTIDPDNIGQAGCTDAERRRFRAILERGWDQCMCLKDCFGGS----- 332 Query: 210 YYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV------SLDI 263 + G+R+DHI SDH PV+V +L + Sbjct: 333 -GPRGMLRGLGMRLDHI--------------------ANFFGSDHCPVLVRFKEKETLAL 371 Query: 264 PEP 266 P Sbjct: 372 PAV 374 >gi|326481851|gb|EGE05861.1| DNA lyase [Trichophyton equinum CBS 127.97] Length = 592 Score = 72.9 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 27/68 (39%), Gaps = 4/68 (5%) Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253 +Y+ W+ ++ N G RID+I+ S S + I G SD Sbjct: 248 CREFHPGRTGMYTCWNQKVNARPGNYGSRIDYILCSDNIRSWFVESNIQEGLIG----SD 303 Query: 254 HTPVIVSL 261 H PV S+ Sbjct: 304 HCPVYASI 311 >gi|326471548|gb|EGD95557.1| DNA lyase [Trichophyton tonsurans CBS 112818] Length = 592 Score = 72.9 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 27/68 (39%), Gaps = 4/68 (5%) Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253 +Y+ W+ ++ N G RID+I+ S S + I G SD Sbjct: 248 CREFHPGRTGMYTCWNQKVNARPGNYGSRIDYILCSDNIRSWFVESNIQEGLIG----SD 303 Query: 254 HTPVIVSL 261 H PV S+ Sbjct: 304 HCPVYASI 311 >gi|34392583|dbj|BAC82624.1| pol-like protein [Ciona intestinalis] Length = 1239 Score = 72.9 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 50/276 (18%), Positives = 89/276 (32%), Gaps = 38/276 (13%) Query: 3 VVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 V AT+NV +R + +++ I+ LQET + + L + + E Sbjct: 19 TVNFATFNVAGLRNDKKRKTIFRYLQNKRYWILFLQETHCSREK---QKLWEMEWQGEIL 75 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 N ++ + + D R++ AT IN L I N+Y P Sbjct: 76 WANGTNNSRGVAILFNKRLSYEVLNHAADPIGRWLMATIKINGTILTITNIYGP------ 129 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + L + I GD+N+ P N N Sbjct: 130 ----NRDEPQFFEDLFQKLLITQYTGATIIGGDFNVTINPALDRNIPTLRNKNSHR---- 181 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN--KGIRIDHIMLSPEATSLLHS 238 + +D +R + +++ N RID+ ++S S L + Sbjct: 182 VLTTNMTAHNLSDPLRFNNPGLKVFT-------RIQNNPYAASRIDYFLVSKLVLSKLRA 234 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI---PEPRKKQQ 271 A I + SDH + + ++ P PR + Sbjct: 235 ASIVPGVK-----SDHC--VATFEVMLDPNPRGRGT 263 >gi|289672873|ref|ZP_06493763.1| exodeoxyribonuclease III Xth [Pseudomonas syringae pv. syringae FF5] Length = 179 Score = 72.9 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 34/151 (22%), Positives = 56/151 (37%), Gaps = 5/151 (3%) Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + K + F ++ ++ I+ G + Q D N + Sbjct: 29 FPSGMNGDEDLNQKFKLMDDFGKYMDKQRRKRREYIYCGSLYVAQQKLDIKNWRDSQQSP 88 Query: 174 CF-TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 F E + + MG+ DA+R YS+W + N G R D+ +L+P Sbjct: 89 GFLAPERAWMDEIVGTMGYVDALREVSREGDQYSWWPDNEQAEMLNLGWRFDYQILTPGL 148 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + SAR+ +PR S H P+IV D Sbjct: 149 RRFVRSARLPRQPR----FSQHAPLIVDYDW 175 >gi|330901157|gb|EGH32576.1| exonuclease III [Pseudomonas syringae pv. japonica str. M301072PT] Length = 53 Score = 72.9 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 23/46 (50%) Query: 216 SKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +G+RID IM S + A +D R KPSDH P+ + L Sbjct: 7 EPKRGLRIDLIMTSTGLQPRIKEAGVDYDLRAMEKPSDHAPIWLEL 52 >gi|270015824|gb|EFA12272.1| hypothetical protein TcasGA2_TC004177 [Tribolium castaneum] Length = 288 Score = 72.9 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 3/108 (2%) Query: 6 VATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETCGQ 62 + TWNV+ +R+ + +K + PDI+C+QET P E Y + + Sbjct: 129 ITTWNVDGLRSWLKKGCLDILKYDKPDILCIQETMCAVYKLPEEVKTIEGYETLWCSSDK 188 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 Y GV I+ K +P+ ++ + + D + R I + + + N Sbjct: 189 DGYAGVGIMVKDKPLNVIYGIDSKEHDTEGRCITVEYETFVVNVYVPN 236 >gi|170665738|gb|ACB29408.1| endonuclease [Arabidopsis thaliana] Length = 408 Score = 72.9 bits (177), Expect = 5e-11, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 37/114 (32%), Gaps = 30/114 (26%) Query: 198 THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE-------------ATSLLHSARIDTK 244 + ++ W + + N G RIDHI+++ + I T+ Sbjct: 38 HPERKDAFTCWSSSSGAEQFNYGSRIDHILVAGSCLHQDEDKQGHSFLACHVKECDILTE 97 Query: 245 ---------PRGWT-------KPSDHTPVIVSL-DIPEPRKKQQDSTSQNMKPI 281 P W K SDH PV +S D+P+ + P+ Sbjct: 98 YKRXXNENMPTRWKGGLVTKLKGSDHVPVFISFDDLPDIPEHSTXPLXSRYLPM 151 >gi|305666478|ref|YP_003862765.1| hypothetical protein FB2170_09421 [Maribacter sp. HTCC2170] gi|88708745|gb|EAR00980.1| hypothetical protein FB2170_09421 [Maribacter sp. HTCC2170] Length = 297 Score = 72.5 bits (176), Expect = 6e-11, Method: Composition-based stats. Identities = 40/269 (14%), Positives = 81/269 (30%), Gaps = 19/269 (7%) Query: 5 TVATWNV-NSI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 + ++N+ N R L +W+ PD++ LQE + + + ++ + Sbjct: 25 KLISYNIWNGFEWGKDTVRQEKLLSWMDSKKPDVVALQELCDYNDDKLTQDAKAWGHDYS 84 Query: 59 TCGQKSYNGVAILSKYQPI----EIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 + + V + SKY + I G F ++ + Sbjct: 85 VLLKTTGYSVGLTSKYPIVLKEKIIEGMHHGALHCSTNGFEIFVVHLSPSQWEKRSEEAE 144 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 + I + + A + + A + + + + Sbjct: 145 ILSGIIDLEIKAGNKVLVCGDFNALSPADADWYNSRADLLQDARKRDEKNDQSENLREGN 204 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN------KGIRIDHIML 228 F V F + F +A + + SF + +G RID+I+ Sbjct: 205 FDYSVMSKFYGV--GLFDNASKFVGTGNDRISFPTQVFRKTETDKKKLIDRGTRIDYILT 262 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPV 257 S + +I P + SDH PV Sbjct: 263 SYNLVNQCIDTKIYNGPEAY-FLSDHYPV 290 >gi|312129153|ref|YP_003996493.1| endonuclease/exonuclease/phosphatase [Leadbetterella byssophila DSM 17132] gi|311905699|gb|ADQ16140.1| Endonuclease/exonuclease/phosphatase [Leadbetterella byssophila DSM 17132] Length = 293 Score = 72.1 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 39/275 (14%), Positives = 71/275 (25%), Gaps = 25/275 (9%) Query: 5 TVATWNVN-----------SIRARIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQS 52 + T N+ +R I + PDIICLQE K + +F + Sbjct: 28 RIMTCNIRVALDEDEEKGVGWSSRKKICLDIISKYKPDIICLQEVLKGQAADF-KKHFS- 85 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 Y + + I + T+ ++ L G+ Sbjct: 86 -GYQLLGFDGPEMDAN----PVGYHGIAKNPILYSTKKYELISAGTYWLSETPLVAGSKS 140 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY---NPIIW 169 + K + R + L+ ++ + Y P I Sbjct: 141 WDTARARHANWIRLKDKSTGKEFRVINLHLDHVSNDAKFHQLKMVIEEAGQYLPAFPQIL 200 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN-KGIRIDHIML 228 D + + + ++ + + K G RID I Sbjct: 201 CGDFNSRFQSKVFSTPRNAGWKEGMEILYGEKEMGFTGHAFKGLQYEKGPSGGRIDFIWY 260 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + + A I PSDH V+ + Sbjct: 261 KGDIE--VKRAEILRDEVKGVYPSDHFFVLNDFQL 293 >gi|295687845|ref|YP_003591538.1| endonuclease/exonuclease/phosphatase [Caulobacter segnis ATCC 21756] gi|295429748|gb|ADG08920.1| Endonuclease/exonuclease/phosphatase [Caulobacter segnis ATCC 21756] Length = 259 Score = 72.1 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 43/275 (15%), Positives = 80/275 (29%), Gaps = 41/275 (14%) Query: 1 MSVVTVATWNVN---SI--RARIHNLAAWIKENNPDIICLQE-------TKTEDKNFPFE 48 M + + T+NV+ + + +A I PD++ LQE T+ D+ Sbjct: 1 MKTLRLMTYNVHRCVGADRKLDVERVAEVIAAERPDVVALQELDVRRARTRGVDQAHRLA 60 Query: 49 TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108 L +++H E G L + +E + + Sbjct: 61 ELLKMSFHFHPAMAVEEELYGDAILTALPERRIKAKGLPLYRRVPGLEPRGALWIEVEVG 120 Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168 G + + K P + GD+N P Sbjct: 121 GTKVQIINTHLGLVPQEQKRQAAALLGPDWMGDDRWVAPGVVLGDFNATPYSATYRMLRT 180 Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 DA + + + AT + + +RIDH+ L Sbjct: 181 ALRDA-----------QAPSPAWPRPATATFPSSFPF---------------MRIDHVFL 214 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + + + D + R SDH P++V L++ Sbjct: 215 TKGLETRGVRSPYDARAR---IASDHLPLVVDLEV 246 >gi|258573517|ref|XP_002540940.1| hypothetical protein UREG_00453 [Uncinocarpus reesii 1704] gi|237901206|gb|EEP75607.1| hypothetical protein UREG_00453 [Uncinocarpus reesii 1704] Length = 499 Score = 72.1 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 31/83 (37%), Gaps = 5/83 (6%) Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253 + +Y+ W+ ++ N G RID+++ S + + I G SD Sbjct: 172 CRNFHPNRQGMYTCWEQRINARPGNYGARIDYVLCSMDMEDWFVWSDIQEGLMG----SD 227 Query: 254 HTPVIVSLDIPEPRKKQQDSTSQ 276 H PV + R + D + Sbjct: 228 HCPVYALIK-DTVRYRDADRSIW 249 >gi|212544628|ref|XP_002152468.1| DNA lyase Apn2 [Penicillium marneffei ATCC 18224] gi|210065437|gb|EEA19531.1| DNA lyase Apn2 [Penicillium marneffei ATCC 18224] Length = 607 Score = 72.1 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 25/72 (34%), Gaps = 4/72 (5%) Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 D +Y+ W+ ++ N G RID+I+ S + I G Sbjct: 244 HDICRSFHPDRRGMYTCWETRVNARPGNYGARIDYILSSLDIKDWWSEGNIQEGLMG--- 300 Query: 251 PSDHTPVIVSLD 262 SDH PV Sbjct: 301 -SDHCPVYAVFK 311 Score = 38.6 bits (88), Expect = 0.88, Method: Composition-based stats. Identities = 10/60 (16%), Positives = 21/60 (35%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80 + DI+ QETK + K+ + + + + G + + Y E+ Sbjct: 17 FNSMFNILEADIVIFQETKIQRKDLRDDMVLVPGWDCYFSLPRHKKGYSGVVIYTRNEVC 76 >gi|92111133|gb|ABE73458.1| endonuclease/reverse transcriptase [Pan troglodytes] Length = 1275 Score = 72.1 bits (175), Expect = 8e-11, Method: Composition-based stats. Identities = 57/261 (21%), Positives = 95/261 (36%), Gaps = 32/261 (12%) Query: 2 SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 S +T+ T NV+ + + I LA+WIK +P + C+QET ++ ++ + Sbjct: 6 SHITILTLNVSGLNSPIKRHRLASWIKSQDPSVCCIQETHLTCRDTHRLKIKGWRKIHQA 65 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 G++ GVAIL + T D + +I +I + L I N+Y P+ Sbjct: 66 NGKQKKAGVAILVSDKTDFKPT---NIKRDKEGHYIMVKGSIQQEELTILNIYAPNTGAP 122 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 K + + +L+ + GD+N D D Sbjct: 123 RFIKQ-----------VLSDLQRDLDSHTLIMGDFNTPLSTLDRSTRQKVNKDT------ 165 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 ++ L D R H Y+F+ ++SK IDHI+ S S Sbjct: 166 QELNSALHQEDLIDIYRTLHPKSTEYTFFSAPHHTYSK-----IDHIVGSKALLSKCKRT 220 Query: 240 RIDTKPRGWTKPSDHTPVIVS 260 I SDHT + + Sbjct: 221 EILIN-----YHSDHTAIKLE 236 >gi|62085792|gb|AAX63287.1| DNA lyase [Cordyceps brongniartii] Length = 579 Score = 72.1 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 5/70 (7%) Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 D R H T +++ WD ++ N G ID+I+ S S + I G Sbjct: 228 WDICRCFHPTRLGMHTCWDTKRNTRPANVGSPIDYILCSDGLKSWFVDSNIQEGLMG--- 284 Query: 251 PSDHTPVIVS 260 SDH PV + Sbjct: 285 -SDHCPVYAT 293 Score = 40.9 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 10/60 (16%), Positives = 22/60 (36%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80 A DI+ +QETK + K+ + + + + + G + ++ Y Sbjct: 2 FQAMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATC 61 >gi|147790936|emb|CAN77234.1| hypothetical protein VITISV_010061 [Vitis vinifera] Length = 3216 Score = 72.1 bits (175), Expect = 9e-11, Method: Composition-based stats. Identities = 44/264 (16%), Positives = 85/264 (32%), Gaps = 34/264 (12%) Query: 2 SVVTV--ATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-H 56 S++ + +WN+ + R + A I+ D++CL ETK +D + SL Sbjct: 553 SLMKIKIISWNIRGVNDRDKRKVIKALIRSQKADLVCLXETKIQD--ISRXIIHSLGVGR 610 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 G S G A V L G ++ + + + +Y P Sbjct: 611 FLGWGAMSARGAAGRVVVFWDXRVLELMGMEVGLFSVSCRFKNCXDGFLWTFTGVYGPT- 669 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 K + + R +P GD+N++ P + Sbjct: 670 ---------MKRHREXFWEELGAIRGLWSDPWCIGGDFNVVRFPSERSREGRLTGSMRRF 720 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 EV ++ L+++ + + R+D ++S + + Sbjct: 721 SEVI----------EELXLKDLPLHGGLFTW----SGGLNGLSRSRLDRFLISEDWENHF 766 Query: 237 HSARIDTKPRGWTKPSDHTPVIVS 260 A + PR SDH P+++ Sbjct: 767 SGAXQCSLPR---PVSDHFPILLD 787 >gi|255728113|ref|XP_002548982.1| hypothetical protein CTRG_03279 [Candida tropicalis MYA-3404] gi|240133298|gb|EER32854.1| hypothetical protein CTRG_03279 [Candida tropicalis MYA-3404] Length = 481 Score = 71.7 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 36/111 (32%), Gaps = 5/111 (4%) Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI 221 + Y D + + + + +Y+ W+ +S N G Sbjct: 278 NKYVYRSMWQDLSIDGKEENKDDEQKQFLYDTTRFIQGRRMKMYTVWNTLTNSREINYGS 337 Query: 222 RIDHIMLS-PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271 RID I+ S + A I G SDH PV DI E ++ Sbjct: 338 RIDLILFSDESMVKNISQADIWPCILG----SDHCPVFTDYDIDECQEDDD 384 Score = 44.8 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 20/53 (37%), Gaps = 9/53 (16%) Query: 2 SVVTVATWNVNSIRARIH-----NLA----AWIKENNPDIICLQETKTEDKNF 45 S + T+NVN I+ + A + DII LQE K + Sbjct: 22 STIRYVTFNVNGIKTIFNYHPWNKFKQDYNALFNSLHADIITLQELKLSESTI 74 >gi|291240985|ref|XP_002740396.1| PREDICTED: Transposon TX1 uncharacterized 149 kDa protein-like [Saccoglossus kowalevskii] Length = 1297 Score = 71.7 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 46/267 (17%), Positives = 86/267 (32%), Gaps = 35/267 (13%) Query: 1 MSVVTVATWNVNSIRARIHN--LAAWIK-ENNPDIICLQETKTEDKNFPFETLQSLNYHI 57 M ++VATWNVN R + + ++K N D+ LQET + + + I Sbjct: 1 MLNISVATWNVNGCRDSLKRHSVFNYLKLNQNADLCFLQETHSLHAD-------EARWQI 53 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 +++ S I + + + +N + L + Sbjct: 54 VWRAPIAFSHGTTTSAGVAILV-------SPNKNITINSSRSIVNGRLLHVNATVNGSRY 106 Query: 118 PITSTKYDDKISWIKRFLRFAS---QRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 + + F L+ + +I GD+N P Sbjct: 107 HLLNVYAPTNGVERSAFFNTLKKTINELDKNDCIIVGGDFNCTLNPSLDR----NRTFEP 162 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 + + F DA R H +++ DS+S R+D ++ S Sbjct: 163 NAPSTQVLQNIVNRFKFIDAWRRFHGNTRAFTW--SRGDSYS-----RLDRFYITNTLAS 215 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261 + S ID+ + SDH P+ + + Sbjct: 216 KIISVLIDSA----STLSDHKPIKLVI 238 >gi|237717228|ref|ZP_04547709.1| conserved hypothetical protein [Bacteroides sp. D1] gi|237718983|ref|ZP_04549464.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|262405995|ref|ZP_06082545.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294647971|ref|ZP_06725522.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CC 2a] gi|294806915|ref|ZP_06765740.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides xylanisolvens SD CC 1b] gi|298480085|ref|ZP_06998284.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. D22] gi|229443211|gb|EEO49002.1| conserved hypothetical protein [Bacteroides sp. D1] gi|229451761|gb|EEO57552.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|262356870|gb|EEZ05960.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|292636687|gb|EFF55154.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CC 2a] gi|294445944|gb|EFG14586.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides xylanisolvens SD CC 1b] gi|298273894|gb|EFI15456.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. D22] Length = 361 Score = 71.7 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 38/267 (14%), Positives = 78/267 (29%), Gaps = 22/267 (8%) Query: 4 VTVATWNVNSIRARIHN-----LAAWIKENNPDIICLQET------KTEDKNFPFETLQS 52 + + ++NV S + +++ ++N DIICLQE K + + L++ Sbjct: 101 IKILSYNVMSFNNLEKKDGKNPVLSYLVDSNADIICLQEYNTATNKKYLTEQDIKKALKA 160 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 Y K +A SK+ + I + + +++ + +L Sbjct: 161 YPYQSVHQQGKGDVQLACFSKFPILSIHPIKYESNYNGSMKYVLNVNNDTLTLIN-NHLE 219 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 Y+D I R + + + Sbjct: 220 SNKLTKEDRGMYEDMIKDPNAKKVKTGLRQLIRKLAEASAIRASQADSVAKAIAACKYPT 279 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 + + T + Y + + RID+I++SP Sbjct: 280 TIVCGDFNDGSISYTHRILTQKLDDAFTQSGKGLGISYNQNKFY----FRIDNILISPNL 335 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIV 259 + + +D K SDH P+ Sbjct: 336 KAY--NCTVDRSI----KASDHYPIWC 356 >gi|329956608|ref|ZP_08297181.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides clarus YIT 12056] gi|328523980|gb|EGF51056.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides clarus YIT 12056] Length = 374 Score = 71.7 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 41/271 (15%), Positives = 79/271 (29%), Gaps = 27/271 (9%) Query: 4 VTVATWNVNSIRARIHN-----LAAWIKENNPDIICLQET-------KTEDKNFPFETLQ 51 + ++N+ + + ++KE+N DI+CLQE + K+ E L+ Sbjct: 110 IKFLSYNIMGFNGAVKKDGKNPILTYLKESNADILCLQEYASDESPRRLTQKDIERE-LK 168 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 YH + ++ Y I++ + + +N T+ + N Sbjct: 169 DYPYHRISVVGSGSGYTNKIACYSKFPILSARVLNYPSGYNGSVLYELKLNEDTITLINN 228 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 +L + K + L + PQ I Sbjct: 229 HLESNKLTKADKDIYEDILKAPEKEKVKSGARLLVHKLAEASAIRAPQADTIAREIA--- 285 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG---IRIDHIML 228 + V + ++ S N+ RID+I++ Sbjct: 286 -SSRYPSVIVCGDFNDTPISYAHRVIAQNLDDAFTQ-SGRGLGISYNQNKFYFRIDNILI 343 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 S S + +D K SDH P+ Sbjct: 344 SKNLQSY--NCTVDRSI----KESDHYPIWC 368 >gi|141447778|gb|ABO87600.1| DNA lyase [Coccidioides immitis] Length = 606 Score = 71.7 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 4/65 (6%) Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253 + D +Y+ W+ ++ N G RID+++ S + + I G SD Sbjct: 256 CRKFHPDRLGMYTCWEQRVNARPGNYGARIDYVLCSVDMEDWFTESNIQEGLMG----SD 311 Query: 254 HTPVI 258 H PV Sbjct: 312 HCPVY 316 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 11/82 (13%) Query: 4 VTVATWNVNSIR--------ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55 + + TWNVN IR A + DII QETK + ++ + + + Sbjct: 3 LRLTTWNVNGIRNPFSYPPRAENKSFERMFDILEGDIIVFQETKIQKRDLRDDMVLIPGW 62 Query: 56 HIET---CGQKSYNGVAILSKY 74 +K Y+GV I ++ Sbjct: 63 DCFFSLPRHKKGYSGVVIYTRC 84 >gi|293368711|ref|ZP_06615316.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CMC 3f] gi|292636176|gb|EFF54663.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CMC 3f] Length = 361 Score = 71.7 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 38/267 (14%), Positives = 78/267 (29%), Gaps = 22/267 (8%) Query: 4 VTVATWNVNSIRARIHN-----LAAWIKENNPDIICLQET------KTEDKNFPFETLQS 52 + + ++NV S + +++ ++N DIICLQE K + + L++ Sbjct: 101 IKILSYNVMSFNNLEKKDGKNPVLSYLVDSNADIICLQEYNTATNKKYLTEQDIKKALKA 160 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 Y K +A SK+ + I + + +++ + +L Sbjct: 161 YPYQSVHQQGKGDVQLACFSKFPILSIHPIEYESNYNGSMKYVLNVNNDTLTLIN-NHLE 219 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 Y+D I R + + + Sbjct: 220 SNKLTKEDRGMYEDMIKDPNAKKVKTGLRQLIRKLAEASAIRASQADSVAKAIAACKYPT 279 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 + + T + Y + + RID+I++SP Sbjct: 280 TIVCGDFNDGSISYTHRILTQKLDDAFTQSGKGLGISYNQNKFY----FRIDNILISPNL 335 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIV 259 + + +D K SDH P+ Sbjct: 336 KAY--NCTVDRSI----KASDHYPIWC 356 >gi|123223481|emb|CAM21423.1| apurinic/apyrimidinic endonuclease 2 [Mus musculus] Length = 246 Score = 71.7 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 14/66 (21%) Query: 3 VVTVATWNVNSIRARIHNLA------------AWIKENNPDIICLQETKTEDKNF--PFE 48 ++ V +WN+N IR+ + LA + E + DI+CLQETK P Sbjct: 1 MLRVVSWNINGIRSPLQGLACQEPSSCPTALRRVLDELDADIVCLQETKVTRDVLTEPLA 60 Query: 49 TLQSLN 54 ++ N Sbjct: 61 IVEGYN 66 >gi|26348875|dbj|BAC38077.1| unnamed protein product [Mus musculus] Length = 260 Score = 71.7 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 14/66 (21%) Query: 3 VVTVATWNVNSIRARIHNLA------------AWIKENNPDIICLQETKTEDKNF--PFE 48 ++ V +WN+N IR+ + LA + E + DI+CLQETK P Sbjct: 1 MLRVVSWNINGIRSPLQGLACQEPSSCPTALRRVLDELDADIVCLQETKVTRDVLTEPLA 60 Query: 49 TLQSLN 54 ++ N Sbjct: 61 IVEGYN 66 >gi|20071198|gb|AAH26769.1| Apex2 protein [Mus musculus] Length = 246 Score = 71.7 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 14/66 (21%) Query: 3 VVTVATWNVNSIRARIHNLA------------AWIKENNPDIICLQETKTEDKNF--PFE 48 ++ V +WN+N IR+ + LA + E + DI+CLQETK P Sbjct: 1 MLRVVSWNINGIRSPLQGLACQEPSSCPTALRRVLDELDADIVCLQETKVTRDVLTEPLA 60 Query: 49 TLQSLN 54 ++ N Sbjct: 61 IVEGYN 66 >gi|26349295|dbj|BAC38287.1| unnamed protein product [Mus musculus] gi|123223483|emb|CAM21425.1| apurinic/apyrimidinic endonuclease 2 [Mus musculus] gi|123230064|emb|CAM15344.1| apurinic/apyrimidinic endonuclease 2 [Mus musculus] Length = 260 Score = 71.7 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 14/66 (21%) Query: 3 VVTVATWNVNSIRARIHNLA------------AWIKENNPDIICLQETKTEDKNF--PFE 48 ++ V +WN+N IR+ + LA + E + DI+CLQETK P Sbjct: 1 MLRVVSWNINGIRSPLQGLACQEPSSCPTALRRVLDELDADIVCLQETKVTRDVLTEPLA 60 Query: 49 TLQSLN 54 ++ N Sbjct: 61 IVEGYN 66 >gi|26333609|dbj|BAC30522.1| unnamed protein product [Mus musculus] gi|123223482|emb|CAM21424.1| apurinic/apyrimidinic endonuclease 2 [Mus musculus] gi|123230063|emb|CAM15343.1| apurinic/apyrimidinic endonuclease 2 [Mus musculus] Length = 266 Score = 71.7 bits (174), Expect = 1e-10, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 14/66 (21%) Query: 3 VVTVATWNVNSIRARIHNLA------------AWIKENNPDIICLQETKTEDKNF--PFE 48 ++ V +WN+N IR+ + LA + E + DI+CLQETK P Sbjct: 1 MLRVVSWNINGIRSPLQGLACQEPSSCPTALRRVLDELDADIVCLQETKVTRDVLTEPLA 60 Query: 49 TLQSLN 54 ++ N Sbjct: 61 IVEGYN 66 >gi|72161438|ref|YP_289095.1| hypothetical protein Tfu_1034 [Thermobifida fusca YX] gi|71915170|gb|AAZ55072.1| conserved hypothetical protein [Thermobifida fusca YX] Length = 232 Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 41/271 (15%), Positives = 67/271 (24%), Gaps = 52/271 (19%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 +V+ V ++N+ S+R +A I+ PD++CLQE Sbjct: 3 AVLRVLSYNIRSLRDDPLAVARVIRSCRPDVVCLQE------------------------ 38 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 + + T R + L L + H + Sbjct: 39 -----------APRHLLWQTKRRWLARRCGLRLAVGRRPGGLEILTAPTLAVDHCSHRLL 87 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND------ACF 175 +Y R + + H A Sbjct: 88 HRYPRLHQRALAIALIRRGRRRIAVAVSHLDLQARARYAHAAQLLAFLGMQPAPAVLAVD 147 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E A +F + S RID I + T Sbjct: 148 VNERPDGPAWQMLATHLVDAGAHGPEGGEPTFPSWRPRS-------RIDTIFVDRRLT-- 198 Query: 236 LHSARIDTKP--RGWTKPSDHTPVIVSLDIP 264 + +A I P R SDH PV+ + +P Sbjct: 199 VRAAGIPAAPARRDLVAASDHLPVLAEIALP 229 >gi|190347850|gb|EDK40199.2| hypothetical protein PGUG_04297 [Meyerozyma guilliermondii ATCC 6260] Length = 543 Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 5/70 (7%) Query: 203 HLYSFWDYYADSWSKNKGIRIDHIML-SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +Y+ W+ + N G RID I+ S + SA I G SDH PV Sbjct: 317 GMYTVWNTLTGARQSNFGSRIDLILTSSKALCKNVSSANIWPFLHG----SDHCPVYTDF 372 Query: 262 DIPEPRKKQQ 271 ++ + K+ Sbjct: 373 EVQDVEKEPP 382 Score = 45.2 bits (105), Expect = 0.011, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 20/53 (37%), Gaps = 9/53 (16%) Query: 2 SVVTVATWNVNSIRARI--------HNLAAW-IKENNPDIICLQETKTEDKNF 45 + + T+NVN ++ ++ DI+ LQE K +N Sbjct: 19 RTLRLVTFNVNGVKTIFNYHPWNGHKQCFDTSLQYLKADIVSLQELKLTAQNL 71 >gi|146415196|ref|XP_001483568.1| hypothetical protein PGUG_04297 [Meyerozyma guilliermondii ATCC 6260] Length = 543 Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 5/70 (7%) Query: 203 HLYSFWDYYADSWSKNKGIRIDHIML-SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +Y+ W+ + N G RID I+ S + SA I G SDH PV Sbjct: 317 GMYTVWNTLTGARQSNFGSRIDLILTSSKALCKNVSSANIWPFLHG----SDHCPVYTDF 372 Query: 262 DIPEPRKKQQ 271 ++ + K+ Sbjct: 373 EVQDVEKEPP 382 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 20/53 (37%), Gaps = 9/53 (16%) Query: 2 SVVTVATWNVNSIRA---------RIHNLAAWIKENNPDIICLQETKTEDKNF 45 + + T+NVN ++ ++ DI+ LQE K +N Sbjct: 19 RTLRLVTFNVNGVKTIFNYHPWNGHKQCFDTLLQYLKADIVSLQELKLTAQNL 71 >gi|147772257|emb|CAN60637.1| hypothetical protein VITISV_022223 [Vitis vinifera] Length = 1887 Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 37/255 (14%), Positives = 79/255 (30%), Gaps = 34/255 (13%) Query: 9 WNVNSI-RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNG 67 WNV R + + IK D++CLQETK ++ ++SL Sbjct: 903 WNVRGAYREKRKLIKDVIKTQKADLVCLQETKLQE--MTSAIVRSLG------------- 947 Query: 68 VAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDK 127 V ++ + G + ++ + G Sbjct: 948 VGRCLEWGALNSRGAAXGGGFWDNRVLQLEEMEVGNYSVSCRFKNVEDGFC-------WA 1000 Query: 128 ISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQ 187 S + + L E G +N +N I + + + S ++ Sbjct: 1001 FSGVYGPSVKVEKEEFLSELGAIKGLWNEPWCVAGDFNMIRFPSXRSRGGRLSPSMRRFT 1060 Query: 188 NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA--RIDTKP 245 + +R ++++ + ++ RID ++S + + + +P Sbjct: 1061 EVIXELELRDLPLQGGMFTW----SGGFNNLLKSRIDRFLISEDWEAHFRECIQGVLARP 1116 Query: 246 RGWTKPSDHTPVIVS 260 SDH+P+I+ Sbjct: 1117 -----VSDHSPIILD 1126 >gi|297827811|ref|XP_002881788.1| hypothetical protein ARALYDRAFT_483247 [Arabidopsis lyrata subsp. lyrata] gi|297327627|gb|EFH58047.1| hypothetical protein ARALYDRAFT_483247 [Arabidopsis lyrata subsp. lyrata] Length = 430 Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 57/238 (23%), Positives = 92/238 (38%), Gaps = 28/238 (11%) Query: 11 VNSIRARIHN----LAAWIKENNPDIICLQETKTEDKNFPFETLQS---LNY-HIETCGQ 62 VN +RA + + N DI+CLQETK + K+ E ++ Y H Sbjct: 205 VNGLRALLKLESFSALQLAQRKNIDILCLQETKIQVKDV--EEIKKTLIDGYDHSFWSCS 262 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 S G + + ++I L T + + N Y+P+ Sbjct: 263 VSKLGYSGTAIISRLDIALGLI--------------VTAEFDSFYLINTYVPNSG-DGLK 307 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + +I R L + LE +P++ GD N + D +NP + A FT+E RQS Sbjct: 308 RLSYRIEEWDRTLSNHIKELEKSKPVVLTGDLNCAHEEIDVFNPAGNKRSAGFTIEERQS 367 Query: 183 FQKLQ-NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 F GF D R H Y++W Y W +N+ I ++S + ++ Sbjct: 368 FGANFLAKGFVDTFRKQHLGVVGYTYWGYRHPWWPQNQQRFI--CLVSKLVKWSIIAS 423 >gi|257125492|ref|YP_003163606.1| endonuclease/exonuclease/phosphatase [Leptotrichia buccalis C-1013-b] gi|257049431|gb|ACV38615.1| Endonuclease/exonuclease/phosphatase [Leptotrichia buccalis C-1013-b] Length = 241 Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 55/273 (20%), Positives = 94/273 (34%), Gaps = 50/273 (18%) Query: 5 TVATWNVNSIRARI---HNLAAWIKENNPDIICLQET-----KTEDKNFPFETLQSLNYH 56 + T+N+ AR+ LA +K+ PD I LQE +++ ++ E Q L Y Sbjct: 4 RLITYNIFG--ARLTNGKELAQSLKKYKPDFIGLQEVDRNTKRSKFRDVVQEMAQELGYS 61 Query: 57 IETCGQKSY-----NGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 + G+A +SKY I H + + + + A I +I + Sbjct: 62 YYYFQKAMDFDSGEYGIAFISKYDVKNIYIHQLPGNSKEKRQVLAARLKIEKFKKKILVV 121 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 N + + + FA+ + GD+N++P N Sbjct: 122 NTHLDNSLDNKNEE-------LADLFAAIEEFKGDIKFLCGDFNLLPTTEFYQKIAENWN 174 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 D F + ++ L+N RID+IM + Sbjct: 175 DTYFEGKDLENKSNLENRNLETQ---------------------------RIDYIMAKKD 207 Query: 232 ATSLLH-SARIDTKPRGWTKPSDHTPVIVSLDI 263 + S I+ + WTK SDH P + L+I Sbjct: 208 SNYRTKQSFFINDDLQEWTKLSDHLPYMAILEI 240 >gi|294659648|ref|XP_462042.2| DEHA2G11814p [Debaryomyces hansenii CBS767] gi|199434123|emb|CAG90528.2| DEHA2G11814p [Debaryomyces hansenii] Length = 565 Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 5/66 (7%) Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSPE-ATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +Y+ W+ + N G RID I+ S + + A I G SDH P+ Sbjct: 324 GMYTVWNTLTGARQSNYGSRIDLILTSSDVLLKSISKADIWPYIMG----SDHCPIFTDF 379 Query: 262 DIPEPR 267 +I + + Sbjct: 380 EIRDSK 385 >gi|152002965|gb|ABS19620.1| DNA lyase [Coccidioides posadasii] Length = 606 Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 4/65 (6%) Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253 + D +Y+ W+ ++ N G RID+++ S + + I G SD Sbjct: 256 CRKFHPDRLGMYTCWEQRVNARPGNYGARIDYVLCSVDMEDWFTESNIQEGLMG----SD 311 Query: 254 HTPVI 258 H PV Sbjct: 312 HCPVY 316 Score = 54.0 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 34/85 (40%), Gaps = 17/85 (20%) Query: 4 VTVATWNVNSIR-----------ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52 + + TWNVN IR + ++ DII QETK + ++ + + Sbjct: 3 LRLTTWNVNGIRNPFSYQPWRENKSFERMFDILEG---DIIVFQETKIQKRDLRDDMVLI 59 Query: 53 LNYHIET---CGQKSYNGVAILSKY 74 + +K Y+GV I ++ Sbjct: 60 PGWDCFFSLPRHKKGYSGVVIYTRC 84 >gi|152002960|gb|ABS19616.1| DNA lyase [Coccidioides immitis] Length = 625 Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 4/65 (6%) Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253 + D +Y+ W+ ++ N G RID+++ S + + I G SD Sbjct: 275 CRKFHPDRLGMYTCWEQRVNARPGNYGARIDYVLCSVDMEDWFTESNIQEGLMG----SD 330 Query: 254 HTPVI 258 H PV Sbjct: 331 HCPVY 335 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 21/101 (20%), Positives = 35/101 (34%), Gaps = 30/101 (29%) Query: 4 VTVATWNVN----SIRARI-----------------------HNLAAWIKENNPDIICLQ 36 + + TWNVN IRAR+ + DII Q Sbjct: 3 LRLTTWNVNGIRFGIRARLLCIYRTNDFLFRNPFSYQPWRENKSFERMFDILEGDIIVFQ 62 Query: 37 ETKTEDKNFPFETLQSLNYHIET---CGQKSYNGVAILSKY 74 ETK + ++ + + + +K Y+GV I ++ Sbjct: 63 ETKIQKRDLRDDMVLIPGWDCFFSLPRHKKGYSGVVIYTRC 103 >gi|295085558|emb|CBK67081.1| Exonuclease III [Bacteroides xylanisolvens XB1A] Length = 361 Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 37/273 (13%), Positives = 83/273 (30%), Gaps = 34/273 (12%) Query: 4 VTVATWNVNSIRARIHN-----LAAWIKENNPDIICLQET------KTEDKNFPFETLQS 52 + + ++NV S + +++ ++N DIICLQE K + + ++ Sbjct: 101 IKILSYNVMSFNNLEKKDGKNPVLSYLVDSNADIICLQEYNTATNKKYLTEQDIKKAFKA 160 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 Y K +A SK+ + I + + +++ +N TL + N + Sbjct: 161 YPYQSVHQQGKGDVQLACFSKFPILSIHPIEYESNYNGSMKYVLN---VNNDTLTLINNH 217 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 L + + +++++ + + + Sbjct: 218 LESNKLTKEDRGMYEDMIK----DPNAKKVKTGLRQLIRKLAEASAIRATQADSVAKTIA 273 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYS------FWDYYADSWSKNKGIRIDHI 226 T ++ Y + + RID+I Sbjct: 274 ESKYPTTIVCGDFNDGSISYTHRILTQKLDDAFTQSGKGLGISYNQNKFY----FRIDNI 329 Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 ++SP + + +D K SDH P+ Sbjct: 330 LISPNLKAY--NCTVDRSI----KASDHYPIWC 356 >gi|269865912|ref|XP_002652091.1| exodeoxyribonuclease III [Enterocytozoon bieneusi H348] gi|220063177|gb|EED41965.1| exodeoxyribonuclease III [Enterocytozoon bieneusi H348] Length = 218 Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 30/224 (13%), Positives = 68/224 (30%), Gaps = 18/224 (8%) Query: 40 TEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF 99 D++ +++ + + ++ + V + + + + + + Sbjct: 4 CSDESLIEAVMETYDKLTDVLNKEQHPVVILCGDMNATYSMCDNYLYMREYEQLHYVSEW 63 Query: 100 TINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159 +++ + + G T Y + + ++E ++ + Sbjct: 64 SMSIDHISKVENPIQRGKLHTRDFYMKLQMSSENGIYTEKVAPRIDELPVYFLTKYDLYD 123 Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK 219 W + F D R + Y+ WD N Sbjct: 124 HFMEKRQRQWLANLMK--------------TFVDTFRIGNKELFQYTCWDRVLRHRESNL 169 Query: 220 GIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 G RID+I+L + + SA I G SDH PV + +D+ Sbjct: 170 GTRIDYILLKTTSHYKIKSAEIRPDIYG----SDHCPVTLEIDM 209 >gi|269866283|ref|XP_002652219.1| exodeoxyribonuclease III [Enterocytozoon bieneusi H348] gi|220062934|gb|EED41837.1| exodeoxyribonuclease III [Enterocytozoon bieneusi H348] Length = 239 Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 32/227 (14%), Positives = 70/227 (30%), Gaps = 18/227 (7%) Query: 40 TEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF 99 D++ +++ + + ++ + V + + + + + + Sbjct: 4 CSDESLIEAVMETYDKLTDVLNKEQHPVVILCGDMNATYSMCDNYLYMREYEQLHYVSEW 63 Query: 100 TINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159 +++ + + G T Y + + ++E ++ + Sbjct: 64 SMSIDHISKVENPIQRGKLHTRDFYMKLQMSSENGIYTEKVAPRIDELPVYFLTKYDLYD 123 Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK 219 W + F D R + Y+ WD N Sbjct: 124 HFMEKRQRQWLANLMK--------------TFVDTFRIGNKELFQYTCWDRVLRHRESNL 169 Query: 220 GIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEP 266 G RID+I+L + + SA I G S+H PV + +DI EP Sbjct: 170 GTRIDYILLKTTSHYKIKSAEIRPDIYG----SNHCPVTLEIDIGEP 212 >gi|260889134|ref|ZP_05900397.1| endonuclease/exonuclease/phosphatase family protein [Leptotrichia hofstadii F0254] gi|260861194|gb|EEX75694.1| endonuclease/exonuclease/phosphatase family protein [Leptotrichia hofstadii F0254] Length = 240 Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 42/266 (15%), Positives = 75/266 (28%), Gaps = 37/266 (13%) Query: 5 TVATWNVNSIRARI-HNLAAWIKENNPDIICLQET-----KTEDKNFPFETLQSLNYHIE 58 + T+N+ R LA IK+ PD + LQE ++ ++ + L Y+ Sbjct: 4 RIMTYNIYGARLADGKKLAKSIKKYKPDFVALQEVDKNTKRSNFRDVTQDFALELGYNYY 63 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + + + + + + Sbjct: 64 YFQKAMDFDKGEFGIAFVS--KYDVKNIYVHELPSVGKEKRQVLAAQISSKYKKHILV-I 120 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 T Y+ + + + GD+N++P ND F + Sbjct: 121 NTHLDYEPAVKSTQIDDLMTVIDYFKGDIKFLCGDFNLLPTTEYYRKIAENWNDTYFEGK 180 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH- 237 ++ L+N RID+IM Sbjct: 181 DLENKSNLENRNLETQ---------------------------RIDYIMAKKGENYRTKQ 213 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263 S I+ + WTK SDH P +V L+I Sbjct: 214 SFFINDDSQEWTKLSDHLPYMVVLEI 239 >gi|222641992|gb|EEE70124.1| hypothetical protein OsJ_30144 [Oryza sativa Japonica Group] Length = 568 Score = 71.4 bits (173), Expect = 1e-10, Method: Composition-based stats. Identities = 39/209 (18%), Positives = 64/209 (30%), Gaps = 29/209 (13%) Query: 101 INTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP 160 + + N+Y P + K+ + K R L L + + GD NI P Sbjct: 96 TDHGHFVLFNIYGPAVEEDDIERVRFKLLFYKILQRRWEHLLALGKRVFVVGDLNIAPSS 155 Query: 161 HDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG 220 D + F +R ++ F + Y+ ++ + N G Sbjct: 156 IDRCDAQPGFEKQTFRKWLRSMLREHGGPFFDAFRSKHPERVGAYTCFNQKVGAEVYNYG 215 Query: 221 IRIDHIMLSPEATS-------------LLHSARIDTKPR---------------GWTKPS 252 RIDHI++S + I R + S Sbjct: 216 SRIDHILISGACFHHCGSVDDHSIFPCHVEECEIMDHFRRGNSENMSMWKGGRSSKLEGS 275 Query: 253 DHTPVIVSL-DIPEPRKKQQDSTSQNMKP 280 DH PV + L +IPE S++ P Sbjct: 276 DHIPVYIVLNEIPELPVHNTPSSAARYLP 304 >gi|56755005|gb|AAW25685.1| SJCHGC04767 protein [Schistosoma japonicum] Length = 192 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 28/108 (25%), Positives = 45/108 (41%), Gaps = 2/108 (1%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS--LNYHIE 58 M+ V V +WN+N +R+ L + + DIIC+QETKT Y Sbjct: 1 MNPVRVCSWNINGLRSIQRPLKNILDSLSSDIICIQETKTTPDISSEFAFADGYNGYFTH 60 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 + + Y+G AI + I T+ D+ ++ F E + L Sbjct: 61 SIHKPGYSGTAIFCRNPLKPIRTYHNLSDILFESTFREDKSSNGWNFL 108 >gi|238505976|ref|XP_002384190.1| DNA lyase, putative [Aspergillus flavus NRRL3357] gi|220690304|gb|EED46654.1| DNA lyase, putative [Aspergillus flavus NRRL3357] Length = 630 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 26/72 (36%), Gaps = 4/72 (5%) Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 F + +Y+ W+ ++ N G RID+++ S + I G Sbjct: 265 FDICRSFHPNRRGMYTCWEQKINARPGNYGSRIDYVLCSLNMQDWFCESDIQEGLMG--- 321 Query: 251 PSDHTPVIVSLD 262 SDH PV Sbjct: 322 -SDHCPVYAIFK 332 Score = 41.3 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 11/62 (17%), Positives = 23/62 (37%), Gaps = 3/62 (4%) Query: 19 HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIE 78 + ++ DI+ LQETK + K+ + + + +S G + + Y Sbjct: 39 KAMFEILE---ADIVVLQETKIQRKDLRDDMVLVPGWDCHFSLPRSKKGYSGVVIYTRNA 95 Query: 79 IV 80 Sbjct: 96 TC 97 >gi|83773202|dbj|BAE63329.1| unnamed protein product [Aspergillus oryzae] Length = 636 Score = 71.4 bits (173), Expect = 2e-10, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 26/72 (36%), Gaps = 4/72 (5%) Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 F + +Y+ W+ ++ N G RID+++ S + I G Sbjct: 264 FDICRSFHPNRRGMYTCWEQKINARPGNYGSRIDYVLCSLNMQDWFCESDIQEGLMG--- 320 Query: 251 PSDHTPVIVSLD 262 SDH PV Sbjct: 321 -SDHCPVYAIFK 331 Score = 42.1 bits (97), Expect = 0.079, Method: Composition-based stats. Identities = 12/63 (19%), Positives = 22/63 (34%) Query: 18 IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPI 77 A + DI+ LQETK + K+ + + + +S G + + Y Sbjct: 34 KRTFEAMFEILEADIVVLQETKIQRKDLRDDMVLVPGWDCHFSLPRSKKGYSGVVIYTRN 93 Query: 78 EIV 80 Sbjct: 94 ATC 96 >gi|302419937|ref|XP_003007799.1| DNA-(apurinic or apyrimidinic site) lyase [Verticillium albo-atrum VaMs.102] gi|261353450|gb|EEY15878.1| DNA-(apurinic or apyrimidinic site) lyase [Verticillium albo-atrum VaMs.102] Length = 334 Score = 71.0 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 29/71 (40%), Gaps = 4/71 (5%) Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 + D +++ WD ++ N G RID+++ S ID+ + Sbjct: 254 WDICRCFHPDRKGMFTCWDTKRNTRPANNGARIDYLLCSAGIKDW----FIDSNIQEGLH 309 Query: 251 PSDHTPVIVSL 261 SDH PV +L Sbjct: 310 GSDHCPVYGTL 320 Score = 59.4 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 24/63 (38%), Gaps = 8/63 (12%) Query: 5 TVATWNVNSIRA-------RIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56 + TWNVN IR R A DII QETK + K+ + + + Sbjct: 3 RITTWNVNGIRNPFGYQPWREKRTFEAMFDILEADIIIFQETKIQRKDLKDDMVLIPGWD 62 Query: 57 IET 59 + Sbjct: 63 VYF 65 >gi|147826870|emb|CAN71106.1| hypothetical protein VITISV_000041 [Vitis vinifera] Length = 2009 Score = 71.0 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 34/259 (13%), Positives = 76/259 (29%), Gaps = 30/259 (11%) Query: 3 VVTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 ++ + +WNV ++ + A I+ D++C+QETK ++ Sbjct: 922 ILKLVSWNVRGANDSSKRKVIKAMIRSQXADLVCIQETKIQN------------------ 963 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 GV + ++ L +G + Sbjct: 964 ---MTEGVVRSIGSGRFLDWGAMGAQGSAGGILVCWDKRSLELLELEVGIYSISCKLKTV 1020 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + + + L EE G ++ +N + + D Sbjct: 1021 ENDVVWVFTGVYGPCNRKERELLWEELGAIRGIWDEPWCIGGDFNVTLSQRDRSRQGSXS 1080 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + ++ + A+ +YS+ + + R+D ++S + A Sbjct: 1081 GAMRRFAQVVDDLALIDLPLQGGVYSW----SGGRNNQXWARLDRFLVSQGWLDIFRGAV 1136 Query: 241 IDTKPRGWTKPSDHTPVIV 259 PR SDH P+++ Sbjct: 1137 QCRLPR---PTSDHFPILL 1152 >gi|145351399|ref|XP_001420068.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144580301|gb|ABO98361.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 371 Score = 71.0 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 48/318 (15%), Positives = 85/318 (26%), Gaps = 60/318 (18%) Query: 4 VTVATWNVNSI--RARIH------------NLAAWIKENNPDIICLQET----------- 38 ++ A+WN N + R R L+ + PD+I LQE Sbjct: 14 LSFASWNANGLLNRIRDKSDPNGRRTRALLALSENVMRKRPDVIALQEVWLKCEEMGKGT 73 Query: 39 -------------KTEDKNFPFETLQSL----NYHIETCGQKSYNGVAILSKYQPIEIVT 81 K D+ E L NY C + I + + Sbjct: 74 GKWDHAKMGAEDKKLRDEKAFIEALMGRRPFKNYDAYYCLANARRAGVITMVKKCLAKPI 133 Query: 82 HLPGDDLDVQARFIEATFTINTQTLRI-----GNLYLPHGNPITSTKYDDKISWIKRFLR 136 + N + + + + S + + F Sbjct: 134 RVARTLALDGRDVTPDEIDTNEGRVLMLEYEKMIVLNTYVPHNGSNAERYEKRALWDFRV 193 Query: 137 FASQRLELEEPLI-FAGDYNIIPQPHDCYNPIIWENDACFT--LEVRQSFQKLQNMGFTD 193 + + + GD N+ Q HD E R+ L D Sbjct: 194 QRFLENYRGKKDVVWMGDLNVAHQDHDVGPSPRLFEGVGGFTLPERRRFTDILAATDMVD 253 Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK--------- 244 RA + Y++ +G+R+D+ ++ + + + S T Sbjct: 254 TYRAFNGDRLTYTWRSTRGQGLDGWQGMRLDYFVVPRKLVARIKSCETSTDRFDDTTAQS 313 Query: 245 -PRGWTKPSDHTPVIVSL 261 P SDH + +SL Sbjct: 314 MPMSCFMDSDHCMIHLSL 331 >gi|111222126|ref|YP_712920.1| hypothetical protein FRAAL2705 [Frankia alni ACN14a] gi|111149658|emb|CAJ61351.1| hypothetical protein FRAAL2705 [Frankia alni ACN14a] Length = 235 Score = 71.0 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 42/249 (16%), Positives = 75/249 (30%), Gaps = 20/249 (8%) Query: 34 CLQETKTEDK-NFPFETLQSLNYHIETCGQK-SYNGVAILSKYQPIEIVTHLPGDDLDVQ 91 L ETK + + + + + + G ++S+ + L + Sbjct: 1 MLTETKDSAGCHLLADAFAGAGHQVVHRWPEYGHYGTMVVSRVEAEPDPFPDRVGYLAAR 60 Query: 92 ARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFA 151 A + L + + + + ++ L + P + Sbjct: 61 AAAAAVPTDLGPLRLIGLYVPSRDASAEKTERKTKWLAACHAALAGSEHL-----PTVLL 115 Query: 152 GDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYY 211 GD NI+ H P E L DA R H T YS+ Sbjct: 116 GDLNILEPDHSPRYPFF------APFEYDFYRALLDEHCLVDAFRVLHPTDAAYSWVG-R 168 Query: 212 ADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271 + G R DH S + + +PR TK SDH+ + ++L IP + + Sbjct: 169 SGD-----GYRYDHAFCSAALRDRVEACDYLDEPR-LTKLSDHSALTLTLTIPGAQPRPI 222 Query: 272 DSTSQNMKP 280 +P Sbjct: 223 TVAGGADEP 231 >gi|307747195|gb|ADN90465.1| Hypothetical protein CJM1_0238 [Campylobacter jejuni subsp. jejuni M1] Length = 67 Score = 71.0 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Query: 4 VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFET 49 + + +WNVN +RA N WI + D I QE K + FP + Sbjct: 1 MKLLSWNVNGLRAICDKNALDWIAQEKIDFIGFQEIKAHEDKFPKKF 47 >gi|255531289|ref|YP_003091661.1| endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM 2366] gi|255344273|gb|ACU03599.1| Endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM 2366] Length = 278 Score = 71.0 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 37/274 (13%), Positives = 69/274 (25%), Gaps = 41/274 (14%) Query: 4 VTVATWNVNSIRARIHN-----------LAAWIKENNPDIICLQET-KTEDKNFPFETLQ 51 + V ++N+ + W+K PDI+ LQE K E + Sbjct: 28 LRVISYNI------LEGMKNDTTKGKQVFVNWVKSYAPDILALQECNKFT--QLSLEEMA 79 Query: 52 S-LNYHIETCGQKSYNGVAILSKYQPIEIVT--HLPGDDLDVQARFIEATFTINTQTLRI 108 + + + + V I SKY +++ V ++ + Sbjct: 80 ARYGHPYAILVKTTGYPVGITSKYPIVDVQKITDNMTHGFIVCKIKDLNVIVLHLNPHKY 139 Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168 G + + F S ++ + + Y+ Sbjct: 140 RKRREEIGEILGTMAVAPVRKRWMIMGDFNSFSPLDKDNYQDGDALKSLQEAAKKYSYHD 199 Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 D Q + I RID+I + Sbjct: 200 NLVDGKSLDFQVQQQILDFGLKDAGKIVEPGGIPK-----------------RRIDYIYV 242 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 S + + +A SDH PVI+ Sbjct: 243 SKDLIKKVTTAHFIRDDF-TAGYSDHKPVIMEFK 275 >gi|2731767|gb|AAC53542.1| endonuclease/reverse transcriptase [Mus musculus] gi|3599334|gb|AAC72802.1| ORF2 [Mus musculus domesticus] Length = 1281 Score = 71.0 bits (172), Expect = 2e-10, Method: Composition-based stats. Identities = 47/259 (18%), Positives = 81/259 (31%), Gaps = 32/259 (12%) Query: 6 VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + N+N + + I L W+ + +P CLQET +K+ + ++ + G K Sbjct: 17 LISLNINGLNSPIKRHRLTNWLHKQDPTFCCLQETHLREKDRHYLRMKGWKTIFQANGMK 76 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 GVAIL + + I L I + Sbjct: 77 KQAGVAILISDKIDFQPK--------------VIKKDKEGHFILIKGKILQEELSILNIY 122 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + + + + I GD+N P D D EV + Sbjct: 123 APNTRAATFTKETLVKLKAHIAPHTIIVGDFNTPLSPMDRSWKQKLNRDTLKLTEVMKQM 182 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 TD R + Y+F+ ++SK IDHI+ + L + I Sbjct: 183 ------DLTDIYRTFYPKTKGYTFFSAPHGTFSK-----IDHIIGHKSGLNRLKNIEIVP 231 Query: 244 KPRGWTKPSDHTPVIVSLD 262 SDH + + + Sbjct: 232 CIL-----SDHHALRLIFN 245 >gi|320104723|ref|YP_004180314.1| endonuclease/exonuclease/phosphatase [Isosphaera pallida ATCC 43644] gi|319752005|gb|ADV63765.1| Endonuclease/exonuclease/phosphatase [Isosphaera pallida ATCC 43644] Length = 390 Score = 70.6 bits (171), Expect = 2e-10, Method: Composition-based stats. Identities = 38/276 (13%), Positives = 76/276 (27%), Gaps = 29/276 (10%) Query: 3 VVTVATWNVNSI-RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + V T N + R AA++ ++ PD+I LQE + L + Sbjct: 140 TIRVVTLNT-GVGRFHAERFAAYVDQHGPDLIGLQE--AQSSEL-VNWLTNPG----DWF 191 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 + S++ + D + +R Sbjct: 192 TARQGELIFASRWPIERVELLDDRRDFGFRGTVAAVVVRSPWGPIR-WVNLHLRSPRDGL 250 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 T + +R +L + + + N + R+ Sbjct: 251 TNAFYGNPQAIADMTLNLKRRDLGSQVASSWIRAQSARDGLPTIVCGDFNQPTQSYLFRR 310 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 + + + H +++ + G+RIDH++ SP + Sbjct: 311 DWGGFADAFQVAGLGYGH------TWFSSW-------HGLRIDHVLGSPS-HWNPRRCEV 356 Query: 242 DTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQN 277 R SDH PV+ L + P + + Q Sbjct: 357 GPDMR-----SDHRPVLADLALRSPPEMNERGAYQR 387 >gi|312215074|emb|CBX95027.1| similar to DNA lyase [Leptosphaeria maculans] Length = 650 Score = 70.6 bits (171), Expect = 3e-10, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 26/69 (37%), Gaps = 4/69 (5%) Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 + D +++ W+ ++ N G RID I+ S E A I G Sbjct: 276 YDLCREYHPDREGMFTHWEQKINARPGNFGSRIDFILCSIEIKDWFMEANIQEGLMG--- 332 Query: 251 PSDHTPVIV 259 SDH PV Sbjct: 333 -SDHCPVYA 340 Score = 60.2 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 18/88 (20%), Positives = 28/88 (31%), Gaps = 8/88 (9%) Query: 3 VVTVATWNVNSIR--------ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 +V + TWNVN IR + A DI+ +QE K + K+ + + Sbjct: 1 MVRITTWNVNGIRNPFGYKPWSTNRTFNAMFDILQADIVIMQELKIQRKDLTDDMVLVPG 60 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTH 82 + K G H Sbjct: 61 FDCYFSLPKHKKGRYYSLGQSWTAHRHH 88 >gi|327269725|ref|XP_003219643.1| PREDICTED: 25-hydroxycholesterol 7-alpha-hydroxylase-like [Anolis carolinensis] Length = 929 Score = 70.2 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 42/234 (17%), Positives = 67/234 (28%), Gaps = 25/234 (10%) Query: 29 NPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDL 88 DI+ LQET + + L + + GV + K + + + Sbjct: 8 KFDIVALQETHIAQNHVSYLKNPKLGREFFSADARKKRGVVLYIKEKIEAELKFKDSEGR 67 Query: 89 DVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPL 148 V I + + N + LR + E E + Sbjct: 68 FVGVEISLGNRKILICNVYVPNGPKTQ---------------FIKELRDQITKSEAEHIM 112 Query: 149 IFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFW 208 IF ++ D + D R + T Y+F+ Sbjct: 113 IFGDFNGVLDPIQDKTRKTKRPKKDDCRRLPGNMLLMKEEFHLQDIWRYHNPTKRDYTFY 172 Query: 209 DYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 DSWS RID I S + +I PR SDH P+ + L+ Sbjct: 173 SNRHDSWS-----RIDMIWASSSLLTNSIDIKIL--PRDK---SDHCPITMCLN 216 >gi|320036533|gb|EFW18472.1| DNA lyase [Coccidioides posadasii str. Silveira] Length = 600 Score = 70.2 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 27/72 (37%), Gaps = 4/72 (5%) Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 + +Y+ W+ ++ N G RID+I+ S + + A I G Sbjct: 255 WDMCRSFFPARSGMYTCWEQRINARPGNFGARIDYILCSLDMKDWMSIADIQEGLMG--- 311 Query: 251 PSDHTPVIVSLD 262 SDH PV Sbjct: 312 -SDHCPVYAIFK 322 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 24/68 (35%), Gaps = 14/68 (20%) Query: 3 VVTVATWNVNSIR-----------ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51 + TWNVN IR + ++ DII LQE K + K+ + + Sbjct: 2 TFRLTTWNVNGIRNPFSYEPWRGTQSFQGMFDLLE---ADIIVLQELKIQRKDLRDDMVL 58 Query: 52 SLNYHIET 59 + Sbjct: 59 VPGWDCFF 66 >gi|157344|gb|AAA28508.1| reverse transcriptase (put.); putative [Drosophila melanogaster] Length = 858 Score = 70.2 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 44/281 (15%), Positives = 77/281 (27%), Gaps = 44/281 (15%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 M+ + +ATWN N + R LA ++ E + D++ L ET K Q +YH Sbjct: 1 MATLRIATWNANGVSQRKLELAQFLHEKHIDVMLLSETHLTSK----YNFQIRDYHFYGT 56 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + + H + + + ++ TL Sbjct: 57 NHPDGKAHGGTAILIRNRMKHHFYKEFAENHLQATSINIQLDDNTLLTLAAVYCPPRFTV 116 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 F L I AGDYN T+ Sbjct: 117 LEAQ------------FLDFFQALGPHFIAAGDYNAKHTHWGSRLVNPKGKQLYKTI--- 161 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + H + ++W + ID ++ + L A Sbjct: 162 ----------IKATNKLDHVSPGSPTYWPSDLNKLPDL----ID-FAVTKNISRSLVKAE 206 Query: 241 IDTKPRGWTKPSDHTPVIVSL-----DIPEPRKKQQDSTSQ 276 SDH+PV++ L ++ P + T+ Sbjct: 207 CLPDLS-----SDHSPVLIHLRRYAENVKPPTRLTSSKTNW 242 >gi|3599347|gb|AAC72810.1| ORF2 [Mus musculus domesticus] Length = 1281 Score = 70.2 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 82/259 (31%), Gaps = 32/259 (12%) Query: 6 VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + N+N + + I L W+ + +P CLQET +K+ + ++ + G K Sbjct: 17 LISLNINGLNSPIKRHRLTNWLHKQDPTFCCLQETHLREKDRHYLRMKGWKTIFQANGMK 76 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 GVAIL + + I L I + Sbjct: 77 KQAGVAILISDKIDFQPK--------------VIKKDKEGHFILIKGKILQEELSILNIY 122 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + + + ++ I GD+N P D D +EV + Sbjct: 123 APNTRAATFTKETLVKLKAQIAPHTIIVGDFNTPLSPMDRSWKQKLNRDTLKLIEVMKQM 182 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 TD R + Y+F+ ++SK IDHI+ + + I Sbjct: 183 ------DLTDIYRTFYPKTKGYTFFSAPHGTFSK-----IDHIIGHKSGLNRFKNIEIVP 231 Query: 244 KPRGWTKPSDHTPVIVSLD 262 SDH + + + Sbjct: 232 CIL-----SDHHALRLIFN 245 >gi|164657069|ref|XP_001729661.1| hypothetical protein MGL_3205 [Malassezia globosa CBS 7966] gi|159103554|gb|EDP42447.1| hypothetical protein MGL_3205 [Malassezia globosa CBS 7966] Length = 317 Score = 70.2 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 30/66 (45%), Gaps = 4/66 (6%) Query: 196 RATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHT 255 + +Y+ W+ D+ + N G R+D+ +++ + A I + G SDH Sbjct: 72 HFFPERDRMYTCWNTLIDARASNYGTRLDYTLVTQGLEPWIQHADIQPQVHG----SDHC 127 Query: 256 PVIVSL 261 P+ + L Sbjct: 128 PIYLDL 133 >gi|198274048|ref|ZP_03206580.1| hypothetical protein BACPLE_00185 [Bacteroides plebeius DSM 17135] gi|198273126|gb|EDY97395.1| hypothetical protein BACPLE_00185 [Bacteroides plebeius DSM 17135] Length = 352 Score = 70.2 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 38/268 (14%), Positives = 79/268 (29%), Gaps = 31/268 (11%) Query: 3 VVTVATWNVNSIRARIHN--------LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 V+ T+NV + L +I+E++ D++CLQE D+ + Sbjct: 100 VMKFLTYNV----MHMQGDTEEEGYPLRRYIQESDADVVCLQEY-LWDEQKTKKVFPMYP 154 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 Y + NG+ LS++ + + + + ++ +T +L +L Sbjct: 155 YRCL-LRASNENGMVCLSRFPIVSVKRIPY-VSANNASFLLQLKMKEDTLSLVCNHLESN 212 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 + Y+ + + + L + Sbjct: 213 KLDAHDKELYEGLLKSPNEQKVKSDSKYLLRKLADAVAIRAPQADSVAQVISRQSGKYLL 272 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG---IRIDHIMLSPE 231 + S + + + W +S N+ RIDH+ +S Sbjct: 273 VCGDFNDSPISYAHHTIGKGLTDAYREAG----W---GPGFSYNRNFLYFRIDHLFVSKG 325 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIV 259 + R+D SDH P+ Sbjct: 326 F--RVLKCRVDNSI----SASDHYPLWC 347 >gi|322420097|ref|YP_004199320.1| endonuclease/exonuclease/phosphatase [Geobacter sp. M18] gi|320126484|gb|ADW14044.1| Endonuclease/exonuclease/phosphatase [Geobacter sp. M18] Length = 246 Score = 70.2 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 45/282 (15%), Positives = 81/282 (28%), Gaps = 54/282 (19%) Query: 1 MSV-VTVATWNVNS----------IRARIHNLAAWIKENNPDIICLQE-------TKTED 42 MS+ +V T+NV+S +R +A I N DI+ LQE T+ D Sbjct: 1 MSMTFSVMTYNVHSCIGTDRKLSPLR-----IAEVIDRCNADIVALQELDAGLPRTQMTD 55 Query: 43 KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN 102 + +++H + G + + D E + Sbjct: 56 QAHLIALTLEMSFHFHSSIHMMEGGYGNAVLSRGDVRLIKAGAIPADPLHPSFERRGAVW 115 Query: 103 TQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD 162 + G+ + + + E P I GD+N + Sbjct: 116 VEVELGGHKIQVLATHFGLNRGERVSQARAVTGHEWLEHPECRHPAILCGDFNATAGSYV 175 Query: 163 CYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR 222 +D R T + +R Sbjct: 176 YRLLTRHMHDVQR-------------GLKGRLPRGTWPAQFPF---------------MR 207 Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 IDH++ S + + S + P SDH P++ +L++P Sbjct: 208 IDHLLASRDL--KVRSVSVPRTPLTRV-ASDHLPLVATLELP 246 >gi|299144762|ref|ZP_07037830.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_23] gi|298515253|gb|EFI39134.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_23] Length = 336 Score = 70.2 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 38/273 (13%), Positives = 84/273 (30%), Gaps = 34/273 (12%) Query: 4 VTVATWNVNSIRARIHN-----LAAWIKENNPDIICLQET------KTEDKNFPFETLQS 52 + + ++NV S + +++ ++N DIICLQE K + + L++ Sbjct: 76 IKILSYNVMSFNNLEKKDGKNPVLSYLVDSNADIICLQEYNTATNKKYLTEQDIKKALKA 135 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 Y K +A SK+ + I + + +++ +N TL + N + Sbjct: 136 YPYQSVHQQGKGDVQLACFSKFPILSIHPIEYESNYNGSMKYVLN---VNNDTLTLINNH 192 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 L + + +++++ + + + Sbjct: 193 LESNKLTKEDRGMYEDMIK----DPNAKKVKTGLRQLIRKLAEASAIRATQADSVAKTIA 248 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYS------FWDYYADSWSKNKGIRIDHI 226 T ++ Y + + RID+I Sbjct: 249 ESKYPTTIVCGDFNDGSISYTHRILTQKLDDAFTQSGKGLGISYNQNKFY----FRIDNI 304 Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 ++SP + + +D K SDH P+ Sbjct: 305 LISPNLKAY--NCTVDRSI----KASDHYPIWC 331 >gi|256828980|ref|YP_003157708.1| Endonuclease/exonuclease/phosphatase [Desulfomicrobium baculatum DSM 4028] gi|256578156|gb|ACU89292.1| Endonuclease/exonuclease/phosphatase [Desulfomicrobium baculatum DSM 4028] Length = 837 Score = 70.2 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 48/275 (17%), Positives = 77/275 (28%), Gaps = 43/275 (15%) Query: 4 VTVATWNVN---SI--RARIHNLAAWIKENNPDIICLQETKT-------EDKNFPFETLQ 51 V V T+NV+ I + +A I + NPD++ LQE ED+ Sbjct: 569 VRVMTYNVHSCVGIDGKLAAERIARVIAQANPDVVALQELDAGRARTGGEDQAQRIAHYL 628 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 + +H + + +E I G Sbjct: 629 EMQHHFHPHIHVENEKYGDAILTHLPMRIIKSGPLPGHLPGGKLEPRGAIWVAIDLHGTE 688 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 + T + + RL ++P+I GD+N +P Sbjct: 689 VNIVNTHLGLTSRERVLQIEALLGDDWLGRLNADQPVILCGDFNCVPSSKGYKLMRSRFL 748 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 DA ++ YS S+ RIDH+ + P Sbjct: 749 DA------------------QAELKEYRPVCTFYS----RLPSF------RIDHVFIQPG 780 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEP 266 + + SDH P+I L IP P Sbjct: 781 I--QVTGITVPCSELAKV-ASDHLPLIADLTIPCP 812 >gi|160884105|ref|ZP_02065108.1| hypothetical protein BACOVA_02081 [Bacteroides ovatus ATCC 8483] gi|156110447|gb|EDO12192.1| hypothetical protein BACOVA_02081 [Bacteroides ovatus ATCC 8483] Length = 361 Score = 70.2 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 38/273 (13%), Positives = 84/273 (30%), Gaps = 34/273 (12%) Query: 4 VTVATWNVNSIRARIHN-----LAAWIKENNPDIICLQET------KTEDKNFPFETLQS 52 + + ++NV S + +++ ++N DIICLQE K + + L++ Sbjct: 101 IKILSYNVMSFNNLEKKDGKNPVLSYLVDSNADIICLQEYNTATNKKYLTEQDIKKALKA 160 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 Y K +A SK+ + I + + +++ +N TL + N + Sbjct: 161 YPYQSVHQQGKGDVQLACFSKFPILSIHPIEYESNYNGSMKYVLN---VNNDTLTLINNH 217 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 L + + +++++ + + + Sbjct: 218 LESNKLTKEDRGMYEDMIK----DPNAKKVKTGLRQLIRKLAEASAIRATQADSVAKTIA 273 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYS------FWDYYADSWSKNKGIRIDHI 226 T ++ Y + + RID+I Sbjct: 274 ESKYPTTIVCGDFNDGSISYTHRILTQKLDDAFTQSGKGLGISYNQNKFY----FRIDNI 329 Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 ++SP + + +D K SDH P+ Sbjct: 330 LISPNLKAY--NCTVDRSI----KASDHYPIWC 356 >gi|3599339|gb|AAC72805.1| ORF2 [Mus musculus domesticus] Length = 1252 Score = 70.2 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 80/259 (30%), Gaps = 32/259 (12%) Query: 6 VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + N+N + + I L W+ + +P CLQET +K+ + ++ + G K Sbjct: 17 LISLNINGLNSPIKRHRLTNWLHKQDPTFCCLQETHLREKDRHYLRMKGWKTIFQANGMK 76 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 GVAIL + + I L I + Sbjct: 77 KQAGVAILISDKIDFQPK--------------VIKKDKEGHFILIKGKILQEELSILNIY 122 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + + + + I GD+N P D D EV + Sbjct: 123 APNTRAATFTKETLVKLKAHIAPHTIIVGDFNTPLSPMDRSWKQKLNRDTLKLTEVMKQM 182 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 TD R + Y+F+ ++SK IDHI+ + + I Sbjct: 183 ------DLTDIYRTFYPKTKGYTFFSAPHGTFSK-----IDHIIGHKSGLNRFKNIEIVP 231 Query: 244 KPRGWTKPSDHTPVIVSLD 262 SDH + + + Sbjct: 232 CIL-----SDHHALRLIFN 245 >gi|307826362|ref|ZP_07656566.1| Endonuclease/exonuclease/phosphatase [Methylobacter tundripaludum SV96] gi|307732603|gb|EFO03476.1| Endonuclease/exonuclease/phosphatase [Methylobacter tundripaludum SV96] Length = 76 Score = 70.2 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 1/70 (1%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + T N NSIR+ W++ N DIIC+QETK + F+ +N+H G Sbjct: 1 MRIITLNANSIRSAGRKGFFTWMQPQNTDIICIQETKAQPYQLSFDPFFLVNHHRFYHGA 60 Query: 63 KSYNGVAILS 72 + L Sbjct: 61 EKKTLADWLY 70 >gi|260809051|ref|XP_002599320.1| hypothetical protein BRAFLDRAFT_199990 [Branchiostoma floridae] gi|229284597|gb|EEN55332.1| hypothetical protein BRAFLDRAFT_199990 [Branchiostoma floridae] Length = 278 Score = 70.2 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 32/266 (12%), Positives = 75/266 (28%), Gaps = 30/266 (11%) Query: 1 MSV--VTVATWNVNSI--RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56 MS+ +++ + NV + + + ++ ++I D+I LQET + Sbjct: 1 MSLCNLSLISLNVRGLLEKNKRSSILSYINRQKADVIFLQETHFTND------------- 47 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 T + + L + ++++ + + G Sbjct: 48 --TRYVLTKEWQGPCFQSFGSNCSRGLAILIKPTLNFVLHDCNSVDSDGRTLVLNCIIEG 105 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + +R F + L A Sbjct: 106 VELCLVNIYAPNKTKERNDFFKKASIWLNCHDPINLLCGGDMNCVQNPLVDKKGGRADTA 165 Query: 177 LEVRQSFQKLQN-MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 L + + L + + DA R+ + Y++ + ++N R+D+ ++ Sbjct: 166 LRSVTAMKNLCSKLDMCDAWRSVNPDTRQYTW-----RNLAQNVACRLDYWLIHKRLVEN 220 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 + I DH V + L Sbjct: 221 IEKCDIRPAILT-----DHQAVFLKL 241 >gi|218186665|gb|EEC69092.1| hypothetical protein OsI_37986 [Oryza sativa Indica Group] Length = 470 Score = 70.2 bits (170), Expect = 3e-10, Method: Composition-based stats. Identities = 26/157 (16%), Positives = 47/157 (29%), Gaps = 10/157 (6%) Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + + + + P + E R+ Sbjct: 316 WGWSHFNQFNIGKGWEYANFSYKNINACEGIRFCPLYQCHNIIVDCGQPGFTLSERRRFG 375 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG--IRIDHIMLSPEATSLLHSARI 241 L DA R H + + + K +G +RID+ ++S + + S I Sbjct: 376 NILSQGKLVDAYRYLHKEKDMDCGFSWSGHPIGKYRGKRMRIDYFLVSEKLKDQIVSCDI 435 Query: 242 DTKPRGWT----KPSDHTPVIVSL--DIPEPRKKQQD 272 RG SDH PV + L ++ P+ K + Sbjct: 436 H--GRGIELEGFYGSDHCPVSLELSEEVEAPKPKSSN 470 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 4/41 (9%) Query: 5 TVATWNVNSIRARIH----NLAAWIKENNPDIICLQETKTE 41 TWN NS+ R+ ++ +PD+IC+QE + Sbjct: 61 RFVTWNANSLLLRMKSDWPAFCQFVSRVDPDVICVQEVRMP 101 >gi|3599320|gb|AAC72793.1| ORF2 [Mus musculus domesticus] gi|3599323|gb|AAC72795.1| ORF2 [Mus musculus domesticus] Length = 1281 Score = 69.8 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 46/275 (16%), Positives = 85/275 (30%), Gaps = 34/275 (12%) Query: 6 VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + N+N + + I L W+ + +P CLQET +K+ + ++ + G K Sbjct: 17 LISLNINGLNSPIKRHRLTNWLHKQDPTFCCLQETHLREKDRHYLRMKGWKTIFQANGMK 76 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 GVAIL + + I L I + Sbjct: 77 KQAGVAILISDKIDFQPK--------------VIKKDKEGHFILIKGKILQEELSILNIY 122 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + + + + I GD+N P D D EV + Sbjct: 123 APNTRAATFTKETLVKLKAHIAPHTIIVGDFNTPLSPMDRSWKQKLNRDTLKLTEVMKQM 182 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 TD R + Y+F+ ++SK IDHI+ + + I Sbjct: 183 ------DLTDIYRTFYPKTKGYTFFSAPHGTFSK-----IDHIIGHKSGLNRFKNIEIVP 231 Query: 244 KPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278 SDH + + + ++ + + + Sbjct: 232 CIL-----SDHHALRLIFN--NKINNRKPTLTWKL 259 >gi|3599342|gb|AAC72807.1| ORF2 [Mus musculus domesticus] Length = 1281 Score = 69.8 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 80/259 (30%), Gaps = 32/259 (12%) Query: 6 VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + N+N + + I L W+ + +P CLQET +K+ + ++ + G K Sbjct: 17 LISLNINGLNSPIKRHRLTNWLHKQDPTFCCLQETHLREKDRHYLRMKGWKTIFQANGMK 76 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 GVAIL + + I L I + Sbjct: 77 KQAGVAILISDKIDFQPK--------------VIKKDKEGHFILIKGKILQEELSILNIY 122 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + + + + I GD+N P D D EV + Sbjct: 123 APNTRAATFTKETLVKLKAHIAPHTIIVGDFNTPLSPMDRSWKQKLNRDTLKLTEVMKQM 182 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 TD R + Y+F+ ++SK IDHI+ + + I Sbjct: 183 ------DLTDIYRTFYPKTKGYTFFSAPHGTFSK-----IDHIIGHKSGLNRFKNIEIVP 231 Query: 244 KPRGWTKPSDHTPVIVSLD 262 SDH + + + Sbjct: 232 CIL-----SDHHALRLIFN 245 >gi|3599336|gb|AAC72803.1| ORF2 [Mus musculus domesticus] Length = 1281 Score = 69.8 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 80/259 (30%), Gaps = 32/259 (12%) Query: 6 VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + N+N + + I L W+ + +P CLQET +K+ + ++ + G K Sbjct: 17 LISLNINGLNSPIKRHRLTNWLHKQDPTFCCLQETHLREKDRHYLRMKGWKTIFQANGMK 76 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 GVAIL + + I L I + Sbjct: 77 KQAGVAILISDKIDFQPK--------------VIKKDKEGHFILIKGKILQEELSILNIY 122 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + + + + I GD+N P D D EV + Sbjct: 123 APNTRAATFTKETLVKLKAHIAPHTIIVGDFNTPLSPMDRSWKQKLNRDTLKLTEVMKQM 182 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 TD R + Y+F+ ++SK IDHI+ + + I Sbjct: 183 ------DLTDIYRTFYPKTKGYTFFSAPHGTFSK-----IDHIIGHKSGLNRFKNIEIVP 231 Query: 244 KPRGWTKPSDHTPVIVSLD 262 SDH + + + Sbjct: 232 CIL-----SDHHALRLIFN 245 >gi|46205899|ref|ZP_00210081.1| COG0708: Exonuclease III [Magnetospirillum magnetotacticum MS-1] gi|46205900|ref|ZP_00210082.1| COG0708: Exonuclease III [Magnetospirillum magnetotacticum MS-1] Length = 180 Score = 69.8 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 39/177 (22%), Positives = 68/177 (38%), Gaps = 6/177 (3%) Query: 2 SVVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 V+T+AT NVN IRA + AWI PD++ LQE + D + L+ + + C Sbjct: 3 RVLTLATANVNGIRAAYRRGMDAWIASRTPDVLLLQEVRAPDS-VVNDLLEGWHVAHQAC 61 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR----FIEATFTINTQTLRIGNLYLPHG 116 K GVA+ S+ + L + + + L + + Y+ G Sbjct: 62 DIKGRAGVAVASRLPVSAVRVGLGAGEPEPPVDTGRWVEADLELPDGGRLTVVSAYIHSG 121 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 K +++++ + E ++ AG+ NI + D N A Sbjct: 122 TVSQPETMVAKYAYLEKVTARLRELAATGEKVVLAGELNIAHRNVDIKNWKGNLKSA 178 >gi|3599326|gb|AAC72797.1| ORF2 [Mus musculus domesticus] Length = 1281 Score = 69.8 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 80/259 (30%), Gaps = 32/259 (12%) Query: 6 VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + N+N + + I L W+ + +P CLQET +K+ + ++ + G K Sbjct: 17 LISLNINGLNSPIKRHRLTNWLHKQDPTFCCLQETHLREKDRHYLRMKGWKTIFQANGMK 76 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 GVAIL + + I L I + Sbjct: 77 KQAGVAILISDKIDFQPK--------------VIKKDKEGHFILIKGKILQEELSILNIY 122 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + + + + I GD+N P D D EV + Sbjct: 123 APNTRAATFTKETLVKLKAHIAPHTIIVGDFNTPLSPMDRSWKQKLNRDTLKLTEVMKQM 182 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 TD R + Y+F+ ++SK IDHI+ + + I Sbjct: 183 ------DLTDIYRTFYPKTKGYTFFSAPHGTFSK-----IDHIIGHKSGLNRFKNIEIVP 231 Query: 244 KPRGWTKPSDHTPVIVSLD 262 SDH + + + Sbjct: 232 CIL-----SDHHALRLIFN 245 >gi|46129427|ref|XP_389065.1| hypothetical protein FG08889.1 [Gibberella zeae PH-1] Length = 609 Score = 69.8 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 27/71 (38%), Gaps = 4/71 (5%) Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 + + + + WD ++ N G RID+++ S S + + I G Sbjct: 255 WDLCRCFHPERAGMNTCWDTKRNTRPANNGSRIDYVLCSDGIKSWFNFSNIQEGLMG--- 311 Query: 251 PSDHTPVIVSL 261 SDH PV Sbjct: 312 -SDHCPVFAIF 321 Score = 42.1 bits (97), Expect = 0.094, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 33/88 (37%), Gaps = 15/88 (17%) Query: 5 TVATWN---VNSIR---------ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52 + TWN ++ R R ++ ++ DI+ +QETK + K+ E + Sbjct: 4 RLTTWNGEFIHFFRGPHTNTFCSQRHQSMFDILE---ADIVVMQETKIQQKDLLDEMVLV 60 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIV 80 + + K G + ++ Y Sbjct: 61 PGWDVFFSLPKHKKGYSGVAIYTRNSTC 88 >gi|325299447|ref|YP_004259364.1| Endonuclease/exonuclease/phosphatase [Bacteroides salanitronis DSM 18170] gi|324319000|gb|ADY36891.1| Endonuclease/exonuclease/phosphatase [Bacteroides salanitronis DSM 18170] Length = 358 Score = 69.8 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 40/272 (14%), Positives = 77/272 (28%), Gaps = 33/272 (12%) Query: 3 VVTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQE----TKTEDKNFPFETLQSL 53 + T+N I + + ++++ DI+CLQE + + L+ + Sbjct: 101 TLKFLTYNTQGISPGEGNGGENAVLSYLRRCGADIVCLQEFIPGVHASAEEI-SQALEDI 159 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 H + K + +A S+Y +E + + + Sbjct: 160 YPHHASTRIKGGDVLACYSRYPILETEEIAYPSLYNGSVLYRIKVGEDTLAVI----NNH 215 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 N + + +K + A + D I EN A Sbjct: 216 LESNKLDAYDKKVYNEILKSPREANVKAEGKHLLRKLADAVALRAPQADSVARAIRENRA 275 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDT------HHLYSFWDYYADSWSKNKGIRIDHIM 227 + L + + D +++ + RIDHI Sbjct: 276 DYMLVCGDFNDSPVSYAYRVIGEGLDDAFVAAGAGPGFTYN-------QNHLYFRIDHIF 328 Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 +SP + ++D R SDH PV Sbjct: 329 VSPAF--RVLECKVDRSIR----ASDHYPVWC 354 >gi|317478347|ref|ZP_07937511.1| endonuclease/Exonuclease/phosphatase [Bacteroides sp. 4_1_36] gi|316905506|gb|EFV27296.1| endonuclease/Exonuclease/phosphatase [Bacteroides sp. 4_1_36] Length = 366 Score = 69.8 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 40/271 (14%), Positives = 79/271 (29%), Gaps = 27/271 (9%) Query: 4 VTVATWNVNSIRARIHN-----LAAWIKENNPDIICLQET-------KTEDKNFPFETLQ 51 + + ++N+ + ++KE+ DI+CLQE K+ E L+ Sbjct: 102 IKLLSYNIMGFDGAAKQDGKNPILTYLKESGADILCLQEYSTVQSSKHLSQKDVERE-LK 160 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 + YH ++ Y I++ D + I T+ + N Sbjct: 161 AYPYHRINTVGSGKGHTNKIACYSKFPILSSRILDYPSEYNGSVLYEIKIGEDTVTLINN 220 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 +L + K + ++++ L+ + I E Sbjct: 221 HLESNKLTKADKVVYEDMLK----SPEKEKVKSGARLLIRKLAEASAIRAPQADTIAHEI 276 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI---RIDHIML 228 A + D ++ S N+ RID+I+ Sbjct: 277 TASPHPYIIVCGDFNDTPISYTHRTIAQDLDDAFTQ-SGRGLGISYNQNRFYFRIDNILT 335 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 S ++ +D K SDH P+ Sbjct: 336 SKNL--RAYNCTVDRSI----KESDHYPIWC 360 >gi|224023542|ref|ZP_03641908.1| hypothetical protein BACCOPRO_00244 [Bacteroides coprophilus DSM 18228] gi|224016764|gb|EEF74776.1| hypothetical protein BACCOPRO_00244 [Bacteroides coprophilus DSM 18228] Length = 356 Score = 69.8 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 47/271 (17%), Positives = 84/271 (30%), Gaps = 26/271 (9%) Query: 2 SVVTVATWNV---NSIR----ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 ++V + T+NV N R A N+ +++++ DIICLQE + +K + Sbjct: 99 TLVKLLTYNVMNTNLSRPEEGAEEGNIVTYLEQSEADIICLQEITSSEKQL-RKAFPMYP 157 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 Y + G + NGVA LSKY + + A F + +L Sbjct: 158 Y-VRRIGFATANGVACLSKYPILSAKRIEYASAFNGSALFRLKIGKDTVTLIN-NHLESN 215 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 + Y + + S + + + Sbjct: 216 KLDAGDKALYKELLKSPDEEKVKTSGKYLWHKLADAVAIRAAQADSVAKVIAEYGYDRML 275 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI---RIDHIMLSPE 231 + S ++ + +S N+ + RIDHI+ + Sbjct: 276 VCGDFNDSPLSYARRVIARGLQDAYVERGN-------GPGFSYNQNLLYFRIDHILAGTD 328 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + +D R SDH PV L+ Sbjct: 329 F--RILHCEVDRSIRT----SDHYPVWCLLE 353 >gi|169595532|ref|XP_001791190.1| hypothetical protein SNOG_00506 [Phaeosphaeria nodorum SN15] gi|111070881|gb|EAT92001.1| hypothetical protein SNOG_00506 [Phaeosphaeria nodorum SN15] Length = 377 Score = 69.8 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 58/324 (17%), Positives = 108/324 (33%), Gaps = 68/324 (20%) Query: 2 SVVTVATWNVNSIRARI-HNLAAWIKENNP----D------------------IICLQE- 37 + + + +WNVN I + ++ ++ ++P D I+ LQE Sbjct: 40 NSIRIFSWNVNGIAPFLQKSIKSFFAASDPQDKEDNIPPPSLRGILQRHKWPSILFLQEV 99 Query: 38 ------TKTEDK-------NFPFE-TLQSLNYHIETCGQKSYNG-------------VAI 70 TKT+D FP E + Y + +I Sbjct: 100 KIATKDTKTQDAVKAAVNTKFPSETDDEGPTYEAHFTLPNDPHNARGLRGSGKLYGVCSI 159 Query: 71 LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG----------NPIT 120 L ++ D D + R T + L I N+Y +G +T Sbjct: 160 LRTDLQNPYQINIRTVDWDKEGRISIVQLTGKSAKLAIFNIYAVNGTSNPYRDPTTGVVT 219 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP--QPHDCYNPIIWENDACFTLE 178 T++D K+ + + ++ ++ AGD N+ P + + A + Sbjct: 220 GTRHDRKLQFHRLLMQECLDLEAAGWRVLLAGDMNVAPDARDGHPKLRTFPKQHALNRAD 279 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL--L 236 + F + +G D R H Y+++ W + R+D+++ A + Sbjct: 280 FHERFLEGTGLGGVDVWREMHGNERRYTYYP-RGREWGSSCD-RVDYVVAGRGAWDAGMV 337 Query: 237 HSARIDTKPRGWTKPSDHTPVIVS 260 ++ I G SDH PV V Sbjct: 338 KASGIL-DTEGERGMSDHCPVWVD 360 >gi|298708328|emb|CBJ48391.1| conserved unknown protein [Ectocarpus siliculosus] Length = 462 Score = 69.8 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 6/66 (9%) Query: 2 SVVTVATWNVNSIRA-RIHNLA---AWIKENNPDIICLQETKTEDKNFPFETLQSL--NY 55 + TV +WNVN +RA L +++ PDI+CLQETK ++K+ Q + Y Sbjct: 74 TTFTVLSWNVNGVRATAKKGLEPLRRMVEKEMPDIVCLQETKIQEKDVEALRAQDILPGY 133 Query: 56 HIETCG 61 E Sbjct: 134 ASEWSC 139 Score = 66.3 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 31/198 (15%), Positives = 61/198 (30%), Gaps = 38/198 (19%) Query: 100 TINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159 T+ + + +Y+P+ W + +P++ GD N+ Sbjct: 264 TVEYEKFFVVTVYVPNSGEKLVRLDYRTKEWDVALKAYVESLEAQGKPVVLNGDLNVAHL 323 Query: 160 PHDCYNP---IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSW 215 D YN + +N A E + +DA R H Y++W + Sbjct: 324 DLDIYNRGAKHLPKNAATTKEERDSFDSWVNGGKVSDAFRRLHPDAEGAYTYWSVRTGAR 383 Query: 216 SKNKGIRIDHIMLSPEATS--------------------------------LLHSARIDT 243 N+G+R+D+ + S ++H + Sbjct: 384 PVNRGLRLDYFVCSNAVFEDGAAGGGQAKATARRAKGSAPKGKGATGAKGMVVHDCFMLD 443 Query: 244 KPRGWTKPSDHTPVIVSL 261 + SDH P+ ++L Sbjct: 444 EATVGV--SDHCPIGITL 459 >gi|3599329|gb|AAC72799.1| ORF2 [Mus musculus domesticus] Length = 1281 Score = 69.8 bits (169), Expect = 4e-10, Method: Composition-based stats. Identities = 46/251 (18%), Positives = 77/251 (30%), Gaps = 32/251 (12%) Query: 6 VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + N+N + + I L W+ + +P CLQET +K+ + ++ + G K Sbjct: 17 LISLNINGLNSPIKRHRLTNWLHKQDPTFCCLQETHLREKDRHYLRMKGWKTIFQANGMK 76 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 GVAIL + + I L I + Sbjct: 77 KQAGVAILISDKIDFQPK--------------VIKKDKEGHFILIKGKILQEELSILNIY 122 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + + + + I GD+N P D D EV + Sbjct: 123 APNTRAATFTKETLVKLKAHIAPHTIIVGDFNTPLSPMDRSWKQKLNRDTLKLTEVMKQM 182 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 TD R + Y+F+ ++SK IDHI+ + + I Sbjct: 183 ------DLTDIYRTFYPKTKGYTFFSAPHGTFSK-----IDHIIGHKSGLNRFKNIEIVP 231 Query: 244 KPRGWTKPSDH 254 SDH Sbjct: 232 CIL-----SDH 237 >gi|225454561|ref|XP_002267349.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1212 Score = 69.4 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 34/260 (13%), Positives = 77/260 (29%), Gaps = 32/260 (12%) Query: 4 VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + TWNV ++ + +I+ D++C+QETK ++ + G Sbjct: 3 MKIITWNVRGANDSSKRKIIKNYIRNQRVDLMCIQETKIQE---------------MSEG 47 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 G+ S ++ G + R +E Q + I Sbjct: 48 IVRSLGLGRFSDWRARNAEGAAGGILICWDKRVLEILDWEEGQFSLSCRFKITENGAIWV 107 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 EE G + +N +++++ + Sbjct: 108 FTGVYGPFTKVEREG------MWEELGAIRGLWGDPWCLGGDFNITLFQHERSSQRRISS 161 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSAR 240 + ++ + + +++ N+ R+D ++SP Sbjct: 162 AMRRFAQIVDDLELVDLPLQGGEFTW-----SGGLNNQAWARLDRFLVSPSWLDQFSGV- 215 Query: 241 IDTKPRGWTKPSDHTPVIVS 260 T+ R SDH P+++ Sbjct: 216 --TQGRLSRPTSDHFPIVLE 233 >gi|225431035|ref|XP_002273445.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 701 Score = 69.4 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 33/261 (12%), Positives = 77/261 (29%), Gaps = 30/261 (11%) Query: 1 MSVVTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 + + +WNV ++ + A I+ D++C+QETK + Sbjct: 72 FMKIKLVSWNVRGANDSSKRKVIKAMIRSQRADLVCIQETKIQ----------------- 114 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 GV + ++ + +GN + Sbjct: 115 ----TMTEGVVRSLGSGRFLDWGAMGAQGSAGGILVCWDKRSLELLEMEVGNYSISCRLK 170 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + + + + + EE G ++ +N + + D Sbjct: 171 NVENEVVWTFTGVYGPCNRKEREMLWEELGAIRGIWDEPWCIGGDFNVTLSQRDRSRQGS 230 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 + + ++ + A+ +YS+ + + R+D ++S + Sbjct: 231 LNGAMRRFAQVVDDLALIDLPLQGGVYSW----SGGRNNQTWARLDRFLVSQGWLDIFRG 286 Query: 239 ARIDTKPRGWTKPSDHTPVIV 259 A PR SDH P+++ Sbjct: 287 AVQCRLPR---PTSDHFPILL 304 >gi|2193870|dbj|BAA20419.1| reverse transcriptase [Mus musculus] Length = 1300 Score = 69.4 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 47/259 (18%), Positives = 80/259 (30%), Gaps = 32/259 (12%) Query: 6 VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + N+N + + I L W+ + +P CLQET +K+ + ++ + G K Sbjct: 36 LISLNINGLNSPIKRHRLTNWLHKQDPTFCCLQETHLREKDRHYLRMKGWKTIFQANGMK 95 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 GVAIL + + I L I + Sbjct: 96 KQAGVAILISDKIDFQPK--------------VIKKDKEGHFILIKGKILQEELSILNIY 141 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 +K + + + I GD+N P D D EV + Sbjct: 142 APNKRAATFTKETLVKLKAHIAPHTIIVGDFNTPLSPMDRSWKQKLNRDTLKLTEVMKQM 201 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 TD R Y+F+ ++SK IDHI+ + + I Sbjct: 202 ------DLTDIYRTFFPKTKGYTFFSAPHGTFSK-----IDHIIGHKSGLNRFKNIEIVP 250 Query: 244 KPRGWTKPSDHTPVIVSLD 262 SDH + + + Sbjct: 251 CIL-----SDHHALRLIFN 264 >gi|229088752|ref|ZP_04220309.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-44] gi|228694577|gb|EEL47996.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-44] Length = 248 Score = 69.4 bits (168), Expect = 5e-10, Method: Composition-based stats. Identities = 47/267 (17%), Positives = 90/267 (33%), Gaps = 40/267 (14%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET----KTEDKNFPFETLQSLN 54 + TWN IR RI +A ++++ PD++ + E K + E L+ Sbjct: 7 LKTLTWN---IRQGGSEKRIPLIAEQLQKHAPDVLVVTEYWEGKKGDRLQ---ELLRDAG 60 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 Y + +IL V + R++E + ++ Sbjct: 61 YVYMETSGGQFKQNSILIASLHEFEVVPSFYKREMNKERWLEIKLVKQGLHILAVHIPTN 120 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 + NP + +++ R + + D P Y Sbjct: 121 NHNPQEKLDFWKEVNAFAREHSNTKSIIIGDFNTGLPEDAQGAPFYGANY---------- 170 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 ++L ++G+TDA R TH + + YS++ + + RIDH +S Sbjct: 171 --------MKELIDLGWTDAWRHTHGSFNGYSWYSNTENGF------RIDHAFVSSSLKD 216 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261 + A + R SDH+ ++V Sbjct: 217 AILEAYFSHRER-LLGYSDHSVLVVEF 242 >gi|126296|sp|P08548|LIN1_NYCCO RecName: Full=LINE-1 reverse transcriptase homolog gi|225048|prf||1207289B reverse transcriptase related protein Length = 1260 Score = 69.4 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 51/261 (19%), Positives = 85/261 (32%), Gaps = 32/261 (12%) Query: 4 VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 +++ + NVN + + H LA WI++ PDI C+QE+ K+ ++ + + G Sbjct: 7 LSIFSINVNGLNCPLKRHRLADWIQKLKPDICCIQESHLTLKDKYRLKVKGWSSIFQANG 66 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 ++ G+AIL T + D T + I I Sbjct: 67 KQKKAGIAILFADAIGFKPTKIRKDKDGHFIFVKGNTQYDEISIINIYAPNHNAPQFI-- 124 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + I GD+N D + E+ Sbjct: 125 ------------RETLTDMSNLISSTSIVVGDFNTPLAVLDRSSKKKLSK------EILD 166 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +Q++ TD R H Y+F+ ++SK IDHI+ S I Sbjct: 167 LNSTIQHLDLTDIYRTFHPNKTEYTFFSSAHGTYSK-----IDHILGHKSNLSKFKKIEI 221 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 SDH + V L+ Sbjct: 222 IPCI-----FSDHHGIKVELN 237 >gi|160891549|ref|ZP_02072552.1| hypothetical protein BACUNI_04001 [Bacteroides uniformis ATCC 8492] gi|156858956|gb|EDO52387.1| hypothetical protein BACUNI_04001 [Bacteroides uniformis ATCC 8492] Length = 366 Score = 69.4 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 40/271 (14%), Positives = 79/271 (29%), Gaps = 27/271 (9%) Query: 4 VTVATWNVNSIRARIHN-----LAAWIKENNPDIICLQET-------KTEDKNFPFETLQ 51 + + ++N+ + ++KE+ DI+CLQE K+ E L+ Sbjct: 102 IKLLSYNIMGFDGAAKQDGKNPILTYLKESGADILCLQEYSTVQSSKHLSQKDVERE-LK 160 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 + YH ++ Y I++ D + I T+ + N Sbjct: 161 AYPYHRINTVGSGKGHTNKIACYSKFPILSSRILDYPSEYNGSVLYEIKIEEDTVTLINN 220 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 +L + K + ++++ L+ + I E Sbjct: 221 HLESNKLTKADKVVYEDMLK----SPEKEKVKSGARLLIRKLAEASAIRAPQADTIAHEI 276 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI---RIDHIML 228 A + D ++ S N+ RID+I+ Sbjct: 277 AASPHPYIIVCGDFNDTPISYAHRTIAQDLDDAFTQ-SGRGLGISYNQNRFYFRIDNILT 335 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 S ++ +D K SDH P+ Sbjct: 336 SKNL--RAYNCTVDRSI----KESDHYPIWC 360 >gi|270295351|ref|ZP_06201552.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270274598|gb|EFA20459.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 366 Score = 69.4 bits (168), Expect = 6e-10, Method: Composition-based stats. Identities = 40/271 (14%), Positives = 79/271 (29%), Gaps = 27/271 (9%) Query: 4 VTVATWNVNSIRARIHN-----LAAWIKENNPDIICLQET-------KTEDKNFPFETLQ 51 + + ++N+ + ++KE+ DI+CLQE K+ E L+ Sbjct: 102 IKLLSYNIMGFDGAAKQDGKNPILTYLKESGADILCLQEYSTVQSSKHLSQKDVERE-LK 160 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 + YH ++ Y I++ D + I T+ + N Sbjct: 161 AYPYHRINTVGSGKGHTNKIACYSKFPILSSRILDYPSEYNGSVLYEIKIGEDTVTLINN 220 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 +L + K + ++++ L+ + I E Sbjct: 221 HLESNKLTKADKVVYEDMLK----SPEKEKVKSGARLLIRKLAEASAIRAPQADTIAHEI 276 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI---RIDHIML 228 A + D ++ S N+ RID+I+ Sbjct: 277 AASPHPYIIVCGDFNDTPISYTHRTIAQDLDDAFTQ-SGRGLGISYNQNRFYFRIDNILT 335 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 S ++ +D K SDH P+ Sbjct: 336 SKNL--RAYNCTVDRSI----KESDHYPIWC 360 >gi|326676501|ref|XP_003200593.1| PREDICTED: hypothetical protein LOC497432 [Danio rerio] Length = 1288 Score = 69.0 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 28/261 (10%), Positives = 71/261 (27%), Gaps = 24/261 (9%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + TWN N ++ D++ LQET + ++ L Sbjct: 5 TINFITWNANGLKQNKYQKFQEL---QCADVVFLQETHIGAGD--EHVIEGLKKRWNVFY 59 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 K + + + + + ++ + + ++Y + T Sbjct: 60 TKYNSSSSGTAILVRKSLDFKCLSVEKGNCGEYVLLKCELEGCLYTLVSVYNHQTDTKTL 119 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + + L + + P ++ + + Sbjct: 120 DNLSRYLQSMTTGLLVIGGDF----------NTFLNPFIDKKWSTGKMTKNRMHNKLLLC 169 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 ++++ D R + ++F+ R+D+ + E + S I Sbjct: 170 VENFMKSLQLADVWRRMNPVKQDFTFY---IRDRPV---SRLDYFFIPDECMWRVGSCEI 223 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 G K D PV + ++ Sbjct: 224 MNSRFGELK--DRQPVSLEIN 242 >gi|147862842|emb|CAN82968.1| hypothetical protein VITISV_021857 [Vitis vinifera] Length = 1122 Score = 69.0 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 42/261 (16%), Positives = 79/261 (30%), Gaps = 37/261 (14%) Query: 4 VTVATWNVNSIRA----RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 + + +WNV RA + + A I+ D++CLQETK ++ + SL Sbjct: 3 LKILSWNVR--RANDRNKRKVIKALIRSQKVDLVCLQETKIQE--MSQGVIHSLG----V 54 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 + V + + +L I F Sbjct: 55 GRFLGWGAVNARGAAGGVVVFWDKRVLELVGLEVGISCRFKNCEDGF-----MWFFTGVY 109 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 T + + + +P GD+N+I P++ EV Sbjct: 110 GPTMKRYREPFWEELGAIRG---LWSDPWCIGGDFNVIRFPNERSRVGRLSGSMRRFSEV 166 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 A+R Y++ + + R+D ++S + + Sbjct: 167 LD----------ELALRXLPLQGGPYTW----SGGLNGQSXSRLDRFLISEDWENHFSGV 212 Query: 240 RIDTKPRGWTKPSDHTPVIVS 260 T PR SDH+P+++ Sbjct: 213 SQCTLPR---PVSDHSPILLD 230 >gi|162452973|ref|YP_001615340.1| endonuclease/exonuclease/phosphatase [Sorangium cellulosum 'So ce 56'] gi|161163555|emb|CAN94860.1| Endonuclease/Exonuclease/phosphatase [Sorangium cellulosum 'So ce 56'] Length = 343 Score = 69.0 bits (167), Expect = 6e-10, Method: Composition-based stats. Identities = 42/276 (15%), Positives = 83/276 (30%), Gaps = 39/276 (14%) Query: 4 VTVATWNVNSIRA----RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 + VA++N RA R+ + E PD++ LQE + + H++T Sbjct: 92 LRVASFNT-GSRAMNIDRLKGF---VAETRPDVLALQECSASEPEL-NAAFPGWSVHVDT 146 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 + ++ + V G ++ L P Sbjct: 147 GMCLVSRHPLLKAESRDRRDVWDKGGHGAILRYEIALPD-----------ALRPSSEEPR 195 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + + ++ + D I + + W ++A + + V Sbjct: 196 GTRVFSLLNLHLETPREAIEALIHGLWKQEAEHDRVIALRAWESELARQWVDEAPYPVVV 255 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD------SWSKNKGIRIDHIMLSPEAT 233 F + + +S A ++ G+RIDH++ P T Sbjct: 256 AGDFNMPVDSAIYRRF--WAGFENAFS----RAGLGFGATKRTRWFGVRIDHVLAGPGWT 309 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKK 269 + A I G SDH P++ L R++ Sbjct: 310 T--ERAWI-----GPDLGSDHLPIVADLRWSGARRE 338 >gi|298386065|ref|ZP_06995622.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 1_1_14] gi|298261293|gb|EFI04160.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 1_1_14] Length = 361 Score = 69.0 bits (167), Expect = 7e-10, Method: Composition-based stats. Identities = 43/271 (15%), Positives = 83/271 (30%), Gaps = 30/271 (11%) Query: 4 VTVATWNVNSIRARIHN-----LAAWIKENNPDIICLQE---TK----TEDKNFPFETLQ 51 + ++NV + +++ ++ DIICLQE TK D++ + L+ Sbjct: 101 IKFLSYNVMGFNNLEKKEGKNPILSYLADSEADIICLQEYNSTKNKKYLTDEDI-RKALK 159 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 + Y ++ + +A SK+ I++ P ++ T +N T+ + N Sbjct: 160 AYPYRSIHNPERGGSQLACFSKFP---ILSARPIKYESTYNGSMQYTLKVNEDTITLINN 216 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 +L K + + L + Q I Sbjct: 217 HLESNKLTKEDKVIYEDMIKDPNAKKVKTGLRQLIKKLAEASAIRSSQADSVAVAIANSK 276 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG---IRIDHIML 228 + T ++ S N RID+I++ Sbjct: 277 ----YPTIITCGDFNDASISYTHRILTQQLDDAFTQ-SGRGLGISYNLNKFYFRIDNILI 331 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 SP ++ +D K SDH P+ Sbjct: 332 SPN--QKAYNCTVDRSI----KDSDHYPIWC 356 >gi|29348242|ref|NP_811745.1| hypothetical protein BT_2833 [Bacteroides thetaiotaomicron VPI-5482] gi|29340145|gb|AAO77939.1| endonuclease/exonuclease/phosphatase-like protein [Bacteroides thetaiotaomicron VPI-5482] Length = 361 Score = 69.0 bits (167), Expect = 7e-10, Method: Composition-based stats. Identities = 44/271 (16%), Positives = 83/271 (30%), Gaps = 30/271 (11%) Query: 4 VTVATWNVNSIRARIHN-----LAAWIKENNPDIICLQE---TK----TEDKNFPFETLQ 51 + ++NV + +++ ++ DIICLQE TK D++ + L+ Sbjct: 101 IKFLSYNVMGFNNLEKKEGKNPILSYLADSEADIICLQEYNSTKNKKYLTDEDI-RKALK 159 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 + Y +K + +A SK+ I++ P ++ T +N T+ + N Sbjct: 160 AYPYRSIHNPEKGGSQLACFSKFP---ILSARPIKYESTYNSSMQYTLKVNEDTITLINN 216 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 +L K + + L + Q I Sbjct: 217 HLESNKLTKEDKVIYEDMIKDPNAKKVKTGLRQLIKKLAEASAIRSSQADSVAVAIANSK 276 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG---IRIDHIML 228 + T ++ S N RID+I++ Sbjct: 277 ----YPTIIACGDFNDASISYTHRILTQQLDDAFTQ-SGRGLGISYNLNKFYFRIDNILI 331 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 SP ++ +D K SDH P+ Sbjct: 332 SPN--QKAYNCTVDRSI----KDSDHYPIWC 356 >gi|301163088|emb|CBW22637.1| putative transmembrane endonuclease/exonuclease/phosphatase family protein [Bacteroides fragilis 638R] Length = 361 Score = 68.7 bits (166), Expect = 8e-10, Method: Composition-based stats. Identities = 44/274 (16%), Positives = 80/274 (29%), Gaps = 31/274 (11%) Query: 2 SVVTVATWNVNSIRARI-----HNLAAWIKENNPDIICLQETKTEDKNFPFE----TLQS 52 + + +AT+NV+S LAA++KE+ DIIC QE ++ F + Sbjct: 101 NTLKIATYNVDSFGNEQSGYSCKELAAYMKEHRVDIICFQEF-AGNRYFTSDSIRNAFAD 159 Query: 53 LNYHIETCGQKSYN--GVAILSKYQ----PIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 Y + S VA+ SKY + + T + L Sbjct: 160 WQYAVIPQAPDSTPILQVALFSKYPVKDSRLITYPDSRNCSMWCDLNVDGQTVRVFNNHL 219 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 + + ++ + + + L A + P Sbjct: 220 QTTEVSQNKRRLERELAKNELTGREEAVAKQLLEGLNENFRKRAAQAKTLEQLIRTTPYP 279 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226 I+ D + H + + ++ + +RID+I Sbjct: 280 ILVCGDFNSLPSSYTYSTVKGDNLQDGFQTCGHGYMYTFRYF---------KRLLRIDYI 330 Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 S E +D SDH PV++ Sbjct: 331 FHSKEFK------GVDYYSPDLDLCSDHNPVVME 358 >gi|260173107|ref|ZP_05759519.1| hypothetical protein BacD2_14655 [Bacteroides sp. D2] gi|315921383|ref|ZP_07917623.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313695258|gb|EFS32093.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 361 Score = 68.7 bits (166), Expect = 8e-10, Method: Composition-based stats. Identities = 39/273 (14%), Positives = 85/273 (31%), Gaps = 34/273 (12%) Query: 4 VTVATWNVNSI-RARIHN----LAAWIKENNPDIICLQET------KTEDKNFPFETLQS 52 + + ++NV S + + +++ +N DIICLQE K + + L++ Sbjct: 101 IKILSYNVMSFSNLEKKDGKNPILSYLANSNADIICLQEYNTATNKKYLTEQDVKKALKA 160 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 Y K +A SK+ + I + + R++ +N TL + N + Sbjct: 161 YPYQSIHQQGKGDVQLACFSKFPILSIHPIEYKSNYNGSMRYVLN---VNNDTLTLINNH 217 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 L + + +++++ + + + Sbjct: 218 LESNKLTKEDRGIYEDMIK----DPNAKKVKTGLRQLIRKLTEASAIRASQADSVARVIA 273 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYS------FWDYYADSWSKNKGIRIDHI 226 T + ++ Y + + RID+I Sbjct: 274 ESKYPTTIVCGDFNDGSISYTHRILTQELDDAFTQSGKGLGISYNLNKFY----FRIDNI 329 Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 ++SP + + +D K SDH P+ Sbjct: 330 LISPNLKAY--NCTVDRSI----KASDHYPIWC 356 >gi|253569392|ref|ZP_04846802.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|251841411|gb|EES69492.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] Length = 361 Score = 68.7 bits (166), Expect = 8e-10, Method: Composition-based stats. Identities = 44/271 (16%), Positives = 83/271 (30%), Gaps = 30/271 (11%) Query: 4 VTVATWNVNSIRARIHN-----LAAWIKENNPDIICLQE---TK----TEDKNFPFETLQ 51 + ++NV + +++ ++ DIICLQE TK D++ + L+ Sbjct: 101 IKFLSYNVMGFNNLEKKEGKNPILSYLADSEADIICLQEYNSTKNKKYLTDEDI-RKALK 159 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 + Y +K + +A SK+ I++ P ++ T +N T+ + N Sbjct: 160 AYPYRSIHNPEKGGSQLACFSKFP---ILSARPIKYESTYNGSMQYTLKVNEDTITLINN 216 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 +L K + + L + Q I Sbjct: 217 HLESNKLTKEDKVIYEDMIKDPNAKKVKTGLRQLIKKLAEASAIRSSQADSVAVAIANSK 276 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG---IRIDHIML 228 + T ++ S N RID+I++ Sbjct: 277 ----YPTIIACGDFNDASISYTHRILTQQLDDAFTQ-SGRGLGISYNLNKFYFRIDNILI 331 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 SP ++ +D K SDH P+ Sbjct: 332 SPN--QKAYNCTVDRSI----KDSDHYPIWC 356 >gi|221101936|ref|XP_002168483.1| PREDICTED: similar to pol-like protein [Hydra magnipapillata] Length = 1161 Score = 68.7 bits (166), Expect = 8e-10, Method: Composition-based stats. Identities = 50/261 (19%), Positives = 75/261 (28%), Gaps = 37/261 (14%) Query: 1 MSVVTVATWNVNSI---RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57 M+V T+ T+NVN + R R HN+ K + DI C+QET ++ + + N Sbjct: 1 MAV-TILTFNVNGLNDDRKR-HNIMNTFKNMDCDIFCIQETHCVNEK-TEKWTKEWNLKT 57 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 + +I T D R I A T+ + +R N+Y P+ Sbjct: 58 GGSALWNNGEARQRGVAILTKIETKFQNVSTDNYGRVIAANITLKNKIIRTINVYGPNDP 117 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + I + + Sbjct: 118 QQKENFFGQLGKHIYQSDILFLSGDFNMVENPVLDREGGDVYNKNNTLGKTNFKKFTDKY 177 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSF----WDYYADSWSKNKGIRIDHIMLSPEAT 233 E D RA + Y+F Y RID I +S Sbjct: 178 E------------LQDVFRAINPLTKAYTFEKSDKTYRC---------RIDRIYVSKNNE 216 Query: 234 SLLHSARIDTKPRGWTKPSDH 254 L S +D K SDH Sbjct: 217 LPLKSKMLDP------KLSDH 231 >gi|147819341|emb|CAN77883.1| hypothetical protein VITISV_024433 [Vitis vinifera] Length = 839 Score = 68.7 bits (166), Expect = 9e-10, Method: Composition-based stats. Identities = 30/259 (11%), Positives = 72/259 (27%), Gaps = 32/259 (12%) Query: 4 VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + +WNV ++ + +I+ D+IC+QETK + Sbjct: 3 LKILSWNVRGANDSSKRKVIKTFIRNQRVDLICIQETKIQ-------------------- 42 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 G+ + + +++ G+ L Sbjct: 43 -SMSEGIVRSLGSGRFLDWKAMNAEGASGGILICWDRRSLDILEWEEGHFTLSCRFWDVE 101 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + + + EE G + +N + + + + Sbjct: 102 NGAVWVFTGVYDPFSKVERDELWEEFGAIRGLWEDPWCLGGDFNITLLQRERSSQRRISS 161 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSAR 240 + +K + + +++ + N+ R+D ++SP Sbjct: 162 TMRKFAEIVDDLGLVDLLLQGGEFTW-----NGGHNNQAWARLDRFLVSPSWVDQFSGI- 215 Query: 241 IDTKPRGWTKPSDHTPVIV 259 T+ R SDH P+ + Sbjct: 216 --TQSRLPQPVSDHFPITL 232 >gi|160889855|ref|ZP_02070858.1| hypothetical protein BACUNI_02286 [Bacteroides uniformis ATCC 8492] gi|156860847|gb|EDO54278.1| hypothetical protein BACUNI_02286 [Bacteroides uniformis ATCC 8492] Length = 361 Score = 68.7 bits (166), Expect = 9e-10, Method: Composition-based stats. Identities = 44/274 (16%), Positives = 91/274 (33%), Gaps = 31/274 (11%) Query: 4 VTVATWNVNSIRARI-----HNLAAWIKENNPDIICLQETKTEDKNFPFETLQ---SLNY 55 + +AT+N+++ I +A ++++ D++C QE ++ +FP ++++ S Sbjct: 104 LKIATYNIHNFGGEITGYSCKEIARYMQQEGVDVLCFQEF-GDNSDFPTDSIRRVLSHWS 162 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 H + S GV ++ + + H + + T T+R+ N +L Sbjct: 163 HALIPSEDSVKGVLPIAVFSRYPLANHRFITYQHSSNCSMMCDVVMGTDTIRLINNHLQT 222 Query: 116 GNPITSTKYDDKISWIKRFLRFAS------QRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 + + ++ R L Y I P++ Sbjct: 223 TSVSQKRRKWERELATDDTRREVQAAKDAAGTLHENFMKRATQTYVISHYAKTSPYPVLL 282 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 D T ++Y++ + +RID+I S Sbjct: 283 CGDFNSIPSSYTYHHLR---KTLKDGFRTAGNGYMYTY-------RYAKRMLRIDYIFHS 332 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 P I+ SDH PVI+ ++I Sbjct: 333 PSLK------GIEYYSPDLDLCSDHNPVIMEVEI 360 >gi|255689971|ref|ZP_05413646.1| AP endonuclease domain protein [Bacteroides finegoldii DSM 17565] gi|260624578|gb|EEX47449.1| AP endonuclease domain protein [Bacteroides finegoldii DSM 17565] Length = 361 Score = 68.7 bits (166), Expect = 9e-10, Method: Composition-based stats. Identities = 39/267 (14%), Positives = 79/267 (29%), Gaps = 22/267 (8%) Query: 4 VTVATWNVNSIRARIHN-----LAAWIKENNPDIICLQET------KTEDKNFPFETLQS 52 + V ++NV S + +++K +N DIICLQE K + + L++ Sbjct: 101 IKVLSYNVMSFSNLKKKDGKNPILSYLKNSNADIICLQEYNTASNKKFVTEQDVKKALKA 160 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 Y +K +A S++ + D + +++ + +L Sbjct: 161 YPYQSIRQQRKGDVQLACFSRFPILSSQLIEYKSDYNGSMKYVLNVNNDTITLIN-NHLE 219 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 Y+D I R + + + Sbjct: 220 SNKLTKEDRGIYEDMIKDPNAKKVKTGLRQLIRKLGEASAIRASQADSVARIITENHYPT 279 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 + + T + Y + + RID+I++SP+ Sbjct: 280 MIVCGDFNDGSISYTHRVLTQELDDAFTQSGKGLGISYNQNKFY----FRIDNILISPDL 335 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIV 259 + + +D K SDH P+ Sbjct: 336 KAY--NCTVDRSI----KASDHYPIWC 356 >gi|313158737|gb|EFR58124.1| endonuclease/exonuclease/phosphatase family protein [Alistipes sp. HGB5] Length = 318 Score = 68.7 bits (166), Expect = 9e-10, Method: Composition-based stats. Identities = 37/276 (13%), Positives = 65/276 (23%), Gaps = 31/276 (11%) Query: 5 TVATWNV----------NSIR------ARIHNLAAWIKENNPDIICLQETKTEDKNFPFE 48 V T NV R A + I+ PD+IC+QE + N+ E Sbjct: 52 RVMTCNVRITGLPEDETAGRRWEDCRDACLKA----IRMYRPDVICMQEVIYDSYNYFKE 107 Query: 49 TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108 + + I ++ + ++ L Sbjct: 108 KFSDYVAYGFAGPEMDPYTEGYH------FIGKNVIFFSKKRYEFVSSGCYWLSETPLAA 161 Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY---N 165 G+ + R L+ + +I Y Sbjct: 162 GSCSWNTMRARHCNWVRLRDRKSGAEFRVLDIHLDHKSDDARREQMKMIVGECAQYADGF 221 Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225 P I D +E +++ + + K RID Sbjct: 222 PQIICGDFNSGIENAPVACLRDAGWQEAYEAVHGPGEAGFTYHGFKGPDYRKKNARRIDF 281 Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 I + +A I PSDH ++ Sbjct: 282 IFVRGNLQP--VAAEILRDKVDGLYPSDHYFLMSDF 315 >gi|253565260|ref|ZP_04842715.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|251945539|gb|EES85946.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] Length = 361 Score = 68.7 bits (166), Expect = 9e-10, Method: Composition-based stats. Identities = 43/274 (15%), Positives = 80/274 (29%), Gaps = 31/274 (11%) Query: 2 SVVTVATWNVNSIRARI-----HNLAAWIKENNPDIICLQETKTEDKNFPFE----TLQS 52 + + +AT+NV+S LAA++KE+ DIIC QE ++ F + Sbjct: 101 NTLKIATYNVDSFGNEQSGYSCKELAAYMKEHRVDIICFQEF-AGNRYFTPDSIRNAFAD 159 Query: 53 LNYHIETCGQKSYN--GVAILSKYQ----PIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 Y + S VA+ SKY + + T + L Sbjct: 160 WQYAVIPQAPDSTPILQVALFSKYPVKDSRLITYPDSRNCSMWCDLNVDGQTIRVFNNHL 219 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 + + ++ + + + L A + P Sbjct: 220 QTTEVSQNKRRLERELAKNELTGREEAVAKQLLEGLNENFRKRAAQAKTLEQLIRTTPYP 279 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226 ++ D + H + + ++ + +RID+I Sbjct: 280 VLVCGDFNSLPSSYTYSTVKGDNLQDGFQTCGHGYMYTFRYF---------KRLLRIDYI 330 Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 S E +D SDH PV++ Sbjct: 331 FHSKEFK------GVDYYSPDLDLCSDHNPVVME 358 >gi|317478865|ref|ZP_07938015.1| endonuclease/Exonuclease/phosphatase [Bacteroides sp. 4_1_36] gi|316904947|gb|EFV26751.1| endonuclease/Exonuclease/phosphatase [Bacteroides sp. 4_1_36] Length = 361 Score = 68.7 bits (166), Expect = 9e-10, Method: Composition-based stats. Identities = 44/274 (16%), Positives = 91/274 (33%), Gaps = 31/274 (11%) Query: 4 VTVATWNVNSIRARI-----HNLAAWIKENNPDIICLQETKTEDKNFPFETLQ---SLNY 55 + +AT+N+++ I +A ++++ D++C QE ++ +FP ++++ S Sbjct: 104 LKIATYNIHNFGGEITGYSCKEIARYMQQEGVDVLCFQEF-GDNSDFPTDSIRRVLSHWS 162 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 H + S GV ++ + + H + + T T+R+ N +L Sbjct: 163 HALIPSEDSVKGVLPIAVFSRYPLANHRFITYQHSSNCSMICDVVMGTDTIRLINNHLQT 222 Query: 116 GNPITSTKYDDKISWIKRFLRFAS------QRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 + + ++ R L Y I P++ Sbjct: 223 TSVSQKRRKWERELATDDTRREVQAAKDAAGTLHENFMKRATQTYVISHYAKTSPYPVLL 282 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 D T ++Y++ + +RID+I S Sbjct: 283 CGDFNSIPSSYTYHHLR---KTLKDGFRTAGNGYMYTY-------RYAKRMLRIDYIFHS 332 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 P I+ SDH PVI+ ++I Sbjct: 333 PSLK------GIEYYSPDLDLCSDHNPVIMEVEI 360 >gi|188994745|ref|YP_001928997.1| hypothetical protein PGN_0881 [Porphyromonas gingivalis ATCC 33277] gi|188594425|dbj|BAG33400.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC 33277] Length = 375 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 46/282 (16%), Positives = 87/282 (30%), Gaps = 42/282 (14%) Query: 2 SVVTVATWNVNSIRARIHN------LAAWIKENNPDIICLQE-------------TKTED 42 S + V T+NV R HN + +IK + DI+CLQE +T Sbjct: 111 SRIKVMTYNVKGFDFRAHNSEDPNPILKYIKGSGADIVCLQEAVLSRKSNSRYVGLRTFK 170 Query: 43 KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN 102 K P L + +G+ +LSKY +++ + + T I Sbjct: 171 KYLPEYRYMEL---SHAREDRKGSGLMLLSKYPILDVHRIPYESAFNGSTAY---TVDIQ 224 Query: 103 TQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD 162 + + + N +L + + + S+ + + + + Sbjct: 225 GRKVLVVNNHLESFRLTMADGTEYLKMVREGEAAALSRMMTAKMGPAY-ALRAVQADSVS 283 Query: 163 CYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG-- 220 Y + + ++ + ++ N+G Sbjct: 284 HYIRCSESEHVIVCGDFNDTPISYARHKIASGLKDAYSDTG-------RGPGFTFNQGAF 336 Query: 221 -IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +RIDHI+ S + + +D SDH PV L Sbjct: 337 KVRIDHILYSSGFLAY--NCTVDKSV----HASDHFPVWCYL 372 >gi|53713283|ref|YP_099275.1| hypothetical protein BF1993 [Bacteroides fragilis YCH46] gi|52216148|dbj|BAD48741.1| conserved hypothetical protein [Bacteroides fragilis YCH46] Length = 361 Score = 68.7 bits (166), Expect = 1e-09, Method: Composition-based stats. Identities = 43/274 (15%), Positives = 80/274 (29%), Gaps = 31/274 (11%) Query: 2 SVVTVATWNVNSIRARI-----HNLAAWIKENNPDIICLQETKTEDKNFPFE----TLQS 52 + + +AT+NV+S +AA++KE+ DIIC QE ++ F + Sbjct: 101 NTLKIATYNVDSFGNEQSGYSCKEIAAYMKEHRVDIICFQEF-AGNRYFTSDSIRNAFAD 159 Query: 53 LNYHIETCGQKSYN--GVAILSKYQ----PIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 Y + S VA+ SKY + + T + L Sbjct: 160 WQYAVIPQAPDSTPILQVALFSKYPVKDSRLITYPDSRNCSMWCDLDVNGQTVRVFNNHL 219 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 + + ++ + + + L A + P Sbjct: 220 QTTEVSQNKRRLERELAKNELTGREEAVAKQLLEGLNENFRKRAAQAKTLEQLIRTTPYP 279 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226 I+ D + H + + ++ + +RID+I Sbjct: 280 ILVCGDFNSLPSSYTYSTVKGDNLQDGFQTCGHGYMYTFRYF---------KRLLRIDYI 330 Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 S E +D SDH PV++ Sbjct: 331 FHSKEFK------GVDYYSPDLDLCSDHNPVVME 358 >gi|257126763|ref|YP_003164877.1| endonuclease/exonuclease/phosphatase [Leptotrichia buccalis C-1013-b] gi|257050702|gb|ACV39886.1| Endonuclease/exonuclease/phosphatase [Leptotrichia buccalis C-1013-b] Length = 257 Score = 68.3 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 46/273 (16%), Positives = 88/273 (32%), Gaps = 55/273 (20%) Query: 5 TVATWNVNSIRARIHN---LAAWIKENNPDIICLQET-----KTEDKNFPFETLQSLNYH 56 + T+N+ AR+ N L IK PD + LQE ++ K+ + + L Y Sbjct: 25 KIMTYNIYG--ARLTNGQKLGESIKPYAPDFVSLQEVDKFTKRSNFKDITSDIAKELGYD 82 Query: 57 IETCGQKSYNG-----VAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 + ++ +S+Y +I T+ + + + A + ++ + Sbjct: 83 YYYFQKSRDYDGGEYGISFISRYPLEKIYTYELPSLGVEKRQILIAELAKKSFGKKVLIM 142 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 D + L ++ + ++ +GD N +P Sbjct: 143 NTHL------DFKPDIKPEEMKSLEMITKFFKKDDLKFLSGDLNFLPTTTYYNEITKNWR 196 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 D ++ +Y D RID+I S Sbjct: 197 D---------------------------------TYIEYNPDGKRTLSDPRIDYIFGSQS 223 Query: 232 ATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 + ++ I+ + WTK SDH P + LDI Sbjct: 224 KKWKVKNSYFINDATQDWTKLSDHLPYMTILDI 256 >gi|167644355|ref|YP_001682018.1| endonuclease/exonuclease/phosphatase [Caulobacter sp. K31] gi|167346785|gb|ABZ69520.1| Endonuclease/exonuclease/phosphatase [Caulobacter sp. K31] Length = 266 Score = 68.3 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 50/294 (17%), Positives = 81/294 (27%), Gaps = 48/294 (16%) Query: 4 VTVATWNVNSIR-------ARIHNLAAWIKENNPDIICLQE-------TKTEDKNFPFET 49 + + T+NV+ R + +A I NPD++ LQE TK D+ Sbjct: 3 LRLMTYNVH--RCVGTDRKLDVERVAEVIAAENPDVVALQELDVRRARTKGVDQAHRLAE 60 Query: 50 LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 L + H E G L + +E I G Sbjct: 61 LLKMKSHFHPAMAVEEELYGDAILTALPEKKVKADGLPLYTRIPGLEPRGAIWVTVEVGG 120 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 + + K + + P I GD+N P Sbjct: 121 VPVQIINTHLGLVPQEQKRQAAALLGEQWMAHEDWKAPGILLGDFNASPYSATYRLLRAA 180 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 DA + +F + +RIDH+ L+ Sbjct: 181 LRDAQTQSPTWKKTPTA-------------------TFPSRFPF-------MRIDHVFLT 214 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE---PRKKQQDSTSQNMKP 280 ++ S+ R SDH P++V L+I D +S + P Sbjct: 215 KGLETVNVSSPYGPLAR---VASDHLPLVVDLEISPAGGSEVPSTDGSSGDAVP 265 >gi|804808|gb|AAA66043.1| unknown protein [Rattus norvegicus] Length = 336 Score = 68.3 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 76/251 (30%), Gaps = 32/251 (12%) Query: 6 VATWNVNSIRARIH--NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + N+N + + I L WI +P CLQET DK+ + ++ + + GQK Sbjct: 12 LISLNINGLNSPIKSHRLTNWIHNEDPAFCCLQETHLRDKDRHYLRVKGWKTNFQANGQK 71 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 GVAIL + + + I I + Sbjct: 72 KQAGVAILISNKINF--------------QLKVIKKDKEGHFIFIKGKIHQDELSILNIY 117 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + + + + I GD+N D +D EV Sbjct: 118 APNTRAPTYVKETLLKLKAHIAPHTIIVGDFNTPLSSMDRSWKQKLNSDVDSIREVMSQM 177 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 TD R + Y+F+ ++SK IDHI+ + I Sbjct: 178 ------DLTDIFRTFYPKAKGYTFFSAPHGTFSK-----IDHIIGQKTGLNRYRKIEIIP 226 Query: 244 KPRGWTKPSDH 254 SDH Sbjct: 227 CVL-----SDH 232 >gi|1334115|emb|CAA27363.1| unnamed protein product [Mus musculus] Length = 466 Score = 68.3 bits (165), Expect = 1e-09, Method: Composition-based stats. Identities = 45/251 (17%), Positives = 76/251 (30%), Gaps = 32/251 (12%) Query: 6 VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + N+N + + I L W+ + +P CLQET +K+ + ++ + G K Sbjct: 36 LISLNINGLNSPIKRHRLTDWLHKQDPTFCCLQETHLREKDRHYLRVKGWKTIFQANGLK 95 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 GVAIL + + I L I + Sbjct: 96 KQAGVAILISDKIDFQPK--------------VIKKDKEGHFILIKGKILQEELSILNIY 141 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + + + + I GD+N D D EV + Sbjct: 142 APNARAATFIRDTLVKLKAYIAPHTIIVGDFNTPLSSKDRSWKQKLNRDTVKLTEVMKQM 201 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 TD R + Y+F+ ++SK IDHI+ + + I Sbjct: 202 ------DLTDIYRTFYPKTKGYTFFSAPHGTFSK-----IDHIIGHKTGLNRYKNIEIVP 250 Query: 244 KPRGWTKPSDH 254 SDH Sbjct: 251 CIL-----SDH 256 >gi|265763356|ref|ZP_06091924.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|263255964|gb|EEZ27310.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] Length = 361 Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 44/274 (16%), Positives = 80/274 (29%), Gaps = 31/274 (11%) Query: 2 SVVTVATWNVNSIRARI-----HNLAAWIKENNPDIICLQETKTEDKNFPFE----TLQS 52 + + +AT+NV+S +AA++KE+ DIIC QE ++ F + Sbjct: 101 NTLKIATYNVDSFGNEQSGYSCKEIAAYMKEHRVDIICFQEF-VGNRYFTSDSIRNAFAD 159 Query: 53 LNYHIETCGQKSYN--GVAILSKYQ----PIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 Y + S VA+ SKY + + T I L Sbjct: 160 WQYAVIPQAPDSTPILQVALFSKYPVKDSRLITYPDSRNCSMWCDLNVDGQTVRIFNNHL 219 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 + + D+ + + + L A + P Sbjct: 220 QTTEVSQNKRRLERELAKDELTGREEAVAKQLLEGLNENFRKRAAQAKTLEQLIRTTPYP 279 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226 ++ D + H + + ++ + +RID+I Sbjct: 280 VLVCGDFNSLPSSYTYSTVKGDNLQDGFQTCGHGYMYTFRYF---------KRLLRIDYI 330 Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 S E +D SDH PV++ Sbjct: 331 FHSKEFK------GVDYYSPDLDLCSDHNPVVME 358 >gi|301618077|ref|XP_002938453.1| PREDICTED: procollagen-lysine,2-oxoglutarate 5-dioxygenase 2-like [Xenopus (Silurana) tropicalis] Length = 1185 Score = 67.9 bits (164), Expect = 1e-09, Method: Composition-based stats. Identities = 49/267 (18%), Positives = 87/267 (32%), Gaps = 28/267 (10%) Query: 6 VATWNVNSIRARIH--NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 V+++NVN + + + K+ N I+ +QE+ ++ P L+ HI T Sbjct: 14 VSSYNVNGLNEPVKRAQIFNECKKANSKIVMIQESHFKENQTPNINLKHYP-HIYTSSNP 72 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +L+ H+ + L I + + Sbjct: 73 EKKATGVLTMIHKDIPFKHI------------ATLADKEGRFLIIKCHMGTLICTLANVY 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 ++ E +I GD N++ P + EV++ Sbjct: 121 VPNQGQAQFIKQFLKILDNFKEGLIIMGGDLNLVLNPVTDSSSGKSNISHKTLREVKKL- 179 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 M DA R + Y+ + +S RID+IM+S L A+I Sbjct: 180 --FSEMQLIDAWRTQNPVKKDYTHFSKTHMVYS-----RIDYIMVSQNWLHLFTQAKI-- 230 Query: 244 KPRGWTKPSDHTPVIVSLDIPEPRKKQ 270 G + SDH+P+ IP+ K Sbjct: 231 ---GNSTLSDHSPIFAKFVIPKTTKPD 254 >gi|53715705|ref|YP_101697.1| hypothetical protein BF4425 [Bacteroides fragilis YCH46] gi|60683643|ref|YP_213787.1| hypothetical protein BF4223 [Bacteroides fragilis NCTC 9343] gi|253566481|ref|ZP_04843934.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|52218570|dbj|BAD51163.1| conserved hypothetical protein [Bacteroides fragilis YCH46] gi|60495077|emb|CAH09896.1| conserved hypothetical protein [Bacteroides fragilis NCTC 9343] gi|251944653|gb|EES85128.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|301165155|emb|CBW24725.1| conserved hypothetical protein [Bacteroides fragilis 638R] Length = 365 Score = 67.9 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 41/282 (14%), Positives = 82/282 (29%), Gaps = 33/282 (11%) Query: 2 SVVTVATWNVNSI-RARIHN----LAAWIKENNPDIICLQE--------TKTEDKNFPFE 48 + + + ++N+ S + N + +IK +N DI+C+QE +K + Sbjct: 99 NSIKLLSYNIMSFGNMKKENGQNPILNYIKNSNADIVCMQEYAGSETAKIHLSNKEI-RQ 157 Query: 49 TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108 L+ YH K+ G + + + + + + L I Sbjct: 158 ALKDYPYHNIKQVGKTGAGSQLACYSKFPILSARMLDYRSNYNGSMVYEIKIGKDTVLLI 217 Query: 109 GNLY-----LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 N + D + + E I + I Q Sbjct: 218 NNHLESNKLTREDKVVYEDMLKDPKAGKVKSGVRQLVNKLAEASAIRSAQARTIAQEIAH 277 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223 F ++ + DA + + Y + + RI Sbjct: 278 SPYPSVIVCGDFNDSPISYAHRVISQDMDDAFTESGCGLGI----SYNQNKFY----FRI 329 Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 D+I++S +D K SDH P+ + +P+ Sbjct: 330 DNILVSKNL--KASGCTVDNSI----KDSDHYPIWCYITLPD 365 >gi|149199457|ref|ZP_01876492.1| endonuclease/exonuclease/phosphatase family protein [Lentisphaera araneosa HTCC2155] gi|149137392|gb|EDM25810.1| endonuclease/exonuclease/phosphatase family protein [Lentisphaera araneosa HTCC2155] Length = 590 Score = 67.9 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 37/265 (13%), Positives = 69/265 (26%), Gaps = 23/265 (8%) Query: 7 ATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57 ++N+ NS R + I++ PD++ LQE + +Q NY Sbjct: 38 MSFNIRNSYARDKENSWDLRKELVYKVIQDYAPDVLGLQE--ANHEQLGELKIQFPNYRH 95 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 + V L D + + + + + RI Sbjct: 96 IGVASDGGTKGQYSAVLYLKSKVRVLDSGDFWISETPEKVSKSWRSAHRRICTWARLQEL 155 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + + + E+ + +N Sbjct: 156 KTSKELVVYNTHLDDGSGKAREKGAEMIMKHLHGQKLKDAFIVMGDFNAAEESKAIAQVK 215 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTH---HLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 +F D R + Y + K+ G +ID+I + + Sbjct: 216 -GTGAFVNAVYPKAVDPFRVLNPEAKNVGTYHGFS------GKDSGAKIDYIFVPKN--A 266 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIV 259 + +A I PSDH PV Sbjct: 267 QVLAAEILKTNHNGRYPSDHFPVTA 291 >gi|153005530|ref|YP_001379855.1| endonuclease/exonuclease/phosphatase [Anaeromyxobacter sp. Fw109-5] gi|152029103|gb|ABS26871.1| Endonuclease/exonuclease/phosphatase [Anaeromyxobacter sp. Fw109-5] Length = 260 Score = 67.9 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 36/274 (13%), Positives = 77/274 (28%), Gaps = 36/274 (13%) Query: 4 VTVATWNVNSIR---ARIH--NLAAWIKENNPDIICLQETKTE-DKNFPFETLQSLNYHI 57 + + +WNV+S+R R +A I + PDI LQE E + P + ++L Sbjct: 1 MRILSWNVHSLRGTDGRRDPERIARVIADLRPDIAGLQEVGGELAADGPRDVAEAL---- 56 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 + ++ + R Sbjct: 57 ---ASLTGMRSTFGPTMSFRGHPYGNGILTRHPIEATRTYDLSVRGREPRGCLRADVEVG 113 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + + + R R + +L D + + N + Sbjct: 114 GVRVHFFSAHLGLHWRERRKQAAQL---LSADILRDTALAHPLVLVGDFNSLSNRSAVPR 170 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 +R+ + +A +F + +R+D + + + Sbjct: 171 WLRRQLVDCAHAARNEAP----------TFPSRFPL-------LRLDRVFVDSAF--RVV 211 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271 + P + SDH P++V L+ E ++ Sbjct: 212 GCEVVHTPLAR-RASDHLPLVVDLEPAESARRPP 244 >gi|260170322|ref|ZP_05756734.1| hypothetical protein BacD2_00508 [Bacteroides sp. D2] gi|315918686|ref|ZP_07914926.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313692561|gb|EFS29396.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 292 Score = 67.9 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 35/266 (13%), Positives = 76/266 (28%), Gaps = 22/266 (8%) Query: 3 VVTVATWNVN-----SIRA---RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 ++ +A++N+ +A R++ L ++ N D+ +QE +T L + Sbjct: 37 IIRLASYNIRTKGDKGDKAWEVRLNALVDVVRRNKFDMFAIQEGRTSQLK-DMMILNEFS 95 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 Y + + + V + + + + Sbjct: 96 YIGRDRDGDNKGEHCAIFYKKDRFKVLKHGDFWYSETPDIPSYGWGARCRRICTWGYFKD 155 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 ++ R S + LE+ A Sbjct: 156 LRTGKKFYVFNSHTDHEATEARRQSSFMLLEQVRKIAKG------KPTFCTGDFNATPDE 209 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 +++ L + + Y++ ++N RID I ++P+ Sbjct: 210 EPIQLLLKDSLLLDSYECTLTPPKGPSGSFYAY------DKTRNIAKRIDFIFVTPKIK- 262 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVS 260 +L ID + SDH PV+V Sbjct: 263 VLSYHTIDDDIKYNKYSSDHFPVMVE 288 >gi|308504898|ref|XP_003114632.1| hypothetical protein CRE_28560 [Caenorhabditis remanei] gi|308258814|gb|EFP02767.1| hypothetical protein CRE_28560 [Caenorhabditis remanei] Length = 351 Score = 67.9 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 45/272 (16%), Positives = 78/272 (28%), Gaps = 49/272 (18%) Query: 6 VATWNVNSI--RA---RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 V +WN++ + R+ R+ +A +K NPDI+ LQE + P + LQSL Y I Sbjct: 110 VMSWNIDGLDGRSLATRMKAVAQIVKSVNPDILFLQEV-VDRDLGPIDKLQSL-YKIYYS 167 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + AIL + H + + +++ L + Sbjct: 168 NRGCQYYTAILVSKMFE-VEKHDVIHFQNSGMYRTLQIVEGSIGGIKVFLLNTHLESTRE 226 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 L F GD N+ + Sbjct: 227 HRGQRCAQFSFCMDKCEEILAQNPGCFLFFGGDLNLRDEEVS------------------ 268 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA------ 232 ++ N + A DT +++ Y D+ N +R D + Sbjct: 269 ----RIPNGILDAWVSAGSDTKTKFTWDTYRNDNKQGFYNAKMRFDRLYWHGPLNKVQFS 324 Query: 233 ---TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + S PSDH + + Sbjct: 325 LEGRQRIRSC--------LCFPSDHWAISATF 348 >gi|119713777|gb|ABL97825.1| hypothetical protein ALOHA_HF1049E08.0013 [uncultured marine bacterium HF10_49E08] Length = 255 Score = 67.9 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 42/248 (16%), Positives = 75/248 (30%), Gaps = 19/248 (7%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQP 76 R + I+ PD++ LQE + + E L + Y+ + + G Y+ Sbjct: 20 RKELVLKTIQNFGPDLLGLQEVWHMQEEYLKEQLSNYAYYGRSRRMEPVEGEQCAVMYRK 79 Query: 77 IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL---YLPHGNPITSTKYDDKISWIKR 133 + + + + ++ RI N N + R Sbjct: 80 DRFEIVKGETFWLSETPEVIESKSWDSSLPRIANWILLKDKKNNKQEIFLINTHFDHKGR 139 Query: 134 FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTD 193 R + RL + G+ +I N + + Sbjct: 140 ESRKQAARLLKKRIQELKGNVRVI--------VTGDFNAREDSDPYLGLVDGKILDTYRM 191 Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253 A ++ + S W+ G RID ++ + + SA ID G PSD Sbjct: 192 AHKSRTEEESTLSGWNGRT------SGNRIDWVLCTRNF--RVLSANIDRSEFGGRYPSD 243 Query: 254 HTPVIVSL 261 H PV +L Sbjct: 244 HYPVTATL 251 >gi|329964252|ref|ZP_08301353.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides fluxus YIT 12057] gi|328525557|gb|EGF52600.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides fluxus YIT 12057] Length = 369 Score = 67.9 bits (164), Expect = 2e-09, Method: Composition-based stats. Identities = 41/270 (15%), Positives = 81/270 (30%), Gaps = 27/270 (10%) Query: 5 TVATWNVNSI--RARIHN---LAAWIKENNPDIICLQE-------TKTEDKNFPFETLQS 52 + ++N+ R + ++KE+ DI+CLQE K+ E L++ Sbjct: 103 KLLSYNIMGFDGATRKDGKNPILTYLKESGADILCLQEYATGGSSHHLSQKDVNLE-LKA 161 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 YH + ++ Y I++ + + I TL + N + Sbjct: 162 YPYHRIHTVGRGKGHTNRIACYSKFPILSARILNYPSEYNGSVIYEVKIGGDTLTLINNH 221 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 L + K + ++++ L+ + I E Sbjct: 222 LESNKLTKADKVVYEDMLK----SPEKEKVKSGVRLLIRKLAEASAIRAPQADTIAHEIA 277 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG---IRIDHIMLS 229 A + + + ++ S N+ RID+I+ S Sbjct: 278 ASRHPYIIVCGDFNDTPISYAHHTISRQLNDAFTQ-SGRGLGISYNQNKFYFRIDNILTS 336 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 H+ +D K SDH P+ Sbjct: 337 RNL--RTHNCTVDRSI----KDSDHYPIWC 360 >gi|302843683|ref|XP_002953383.1| hypothetical protein VOLCADRAFT_118317 [Volvox carteri f. nagariensis] gi|300261480|gb|EFJ45693.1| hypothetical protein VOLCADRAFT_118317 [Volvox carteri f. nagariensis] Length = 705 Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 4/76 (5%) Query: 4 VTVATWNVNSIR---ARIHNLAAWIKENNP-DIICLQETKTEDKNFPFETLQSLNYHIET 59 + V TWN+N +R A L ++ P D++C QETK + E + + Sbjct: 3 LRVLTWNINGLRRVVAVFGGLQRLLEALAPADVVCFQETKLTRVDLQRELALADGWESFF 62 Query: 60 CGQKSYNGVAILSKYQ 75 + G + ++ + Sbjct: 63 AFTRGKVGYSGVATFC 78 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 21/117 (17%), Positives = 34/117 (29%), Gaps = 52/117 (44%) Query: 197 ATHDTHHLYSFWDYYADSWSKNKGIRIDHIML---------------------------- 228 H Y+ W+ + + N G RIDH+++ Sbjct: 308 FHPKRQHAYTCWNTSSGARVNNYGSRIDHVLVADGTRSYSTGCGGFPSDAAGAYGAVTDS 367 Query: 229 -------------SPE-------ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 SP + A I + +G SDH P V L++P+ Sbjct: 368 THVAVDVAALPAGSPRTGPPGVLCPPWVVMADIIPEFQG----SDHAPAWVELELPD 420 >gi|255008849|ref|ZP_05280975.1| putative transmembrane endonuclease/exonuclease/phosphatase family protein [Bacteroides fragilis 3_1_12] gi|313146594|ref|ZP_07808787.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] gi|313135361|gb|EFR52721.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] Length = 361 Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 41/274 (14%), Positives = 79/274 (28%), Gaps = 31/274 (11%) Query: 2 SVVTVATWNVNSIRARI-----HNLAAWIKENNPDIICLQETKTEDKNFPFE----TLQS 52 + +AT+NV+S +A +++E+ DI+CLQE ++ F + T + Sbjct: 101 RTLKIATYNVDSFGNEQSGYSCKEIAKYMEEHQVDIVCLQEF-AANRYFTADSIRNTFAN 159 Query: 53 LNYHIETCGQKSYNGVAIL------SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 Y I S + + I K + + T + L Sbjct: 160 WQYVIIPQAPDSISILQIALFSKYPVKDSKLITYPDSRNCSMWCDLDVDGQTVRVFNNHL 219 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 + + ++ + R + L A + P Sbjct: 220 QTTEVSQNKRRLERELAKNELTGREEAVARQLLEGLNENFRKRAAQAKTLEQLIRTTPYP 279 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226 I+ D + H + + ++ + +RID+I Sbjct: 280 ILVCGDFNSLPSSYTYSTVKGDNLQDGFQTCGHGYMYTFRYF---------KRLLRIDYI 330 Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 S E +D SDH PV++ Sbjct: 331 FHSKEFK------GVDYYSPDLDLCSDHNPVVME 358 >gi|60681531|ref|YP_211675.1| putative transmembrane endonuclease/exonuclease/phosphatase family protein [Bacteroides fragilis NCTC 9343] gi|60492965|emb|CAH07743.1| putative transmembrane endonuclease/exonuclease/phosphatase family protein [Bacteroides fragilis NCTC 9343] Length = 361 Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 44/274 (16%), Positives = 80/274 (29%), Gaps = 31/274 (11%) Query: 2 SVVTVATWNVNSIRARI-----HNLAAWIKENNPDIICLQETKTEDKNFPFE----TLQS 52 + + +AT+NV+S +AA++KE+ DIIC QE ++ F + Sbjct: 101 NTLKIATYNVDSFGNEQSGYSCKEIAAYMKEHRVDIICFQEF-AGNRYFTPDSIRNAFAD 159 Query: 53 LNYHIETCGQKSYN--GVAILSKYQ----PIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 Y + S VA+ SKY + + T + L Sbjct: 160 WQYAVIPQAPDSTPILQVALFSKYPVKDSRLITYPDSRNCSMWCDLDVNGQTVRVFNNHL 219 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 + + ++ + R + L A + P Sbjct: 220 QTTEVSQNKRRLERELAKNELTGREEAVARQLLEGLNENFRKRAAQAKTLEQLIRTTPYP 279 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226 I+ D + H + + ++ + +RID+I Sbjct: 280 ILVCGDFNSLPSSYTYSTVKGDNLQDGFQTCGHGYMYTFRYF---------KRLLRIDYI 330 Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 S E +D SDH PV++ Sbjct: 331 FHSKEFK------GVDYYSPDLNLCSDHNPVVME 358 >gi|270294111|ref|ZP_06200313.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270275578|gb|EFA21438.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 361 Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 44/274 (16%), Positives = 90/274 (32%), Gaps = 31/274 (11%) Query: 4 VTVATWNVNSIRARI-----HNLAAWIKENNPDIICLQETKTEDKNFPFETLQ---SLNY 55 + +AT+N+++ I +A ++++ D++C QE ++ +FP ++++ S Sbjct: 104 LKIATYNIHNFGGEITGYSCKEIARYMQQEGVDVLCFQEF-GDNSDFPTDSIRRVLSHWS 162 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 H + S GV ++ + + H + + T T+R+ N +L Sbjct: 163 HALIPSEDSVKGVLPIAVFSRYPLANHRFITYQQSSNCSMMCDVAMGTDTIRLINNHLQT 222 Query: 116 GNPITSTKYDDKISWIKRFLRFAS------QRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 + + ++ R L Y I P++ Sbjct: 223 TSVSQKRRKWERELATDDTRREVQAAKDAAGTLHENFMKRATQTYVISHYAKTSPYPVLL 282 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 D T ++Y++ + +RID+I S Sbjct: 283 CGDFNSIPSSYTYHHLR---KTLKDGFRTAGNGYMYTY-------RYAKRMLRIDYIFHS 332 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 P I SDH PVI+ ++I Sbjct: 333 PSLK------GIAYYSPDLDLCSDHNPVIMEVEI 360 >gi|149637342|ref|XP_001510545.1| PREDICTED: similar to APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Ornithorhynchus anatinus] Length = 549 Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 25/143 (17%), Positives = 40/143 (27%), Gaps = 11/143 (7%) Query: 145 EEPLIFAGDYNIIPQPHDCYNPIIW-----ENDACFTLEVRQSFQKLQNMGFTDAIRATH 199 P+ + + + A EV F D+ R H Sbjct: 211 HRPIDHCDPSDPEHFDENPGRRWLNEFLWEPGKAPGKGEVADPPPGGGGGAFVDSFRYFH 270 Query: 200 DTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEA-TSLLHSARIDTKPRGWTKPSDHTPV 257 T + ++ W + N G RID+I+ T + + + G SDH PV Sbjct: 271 PTQTNAFTCWSVPQGARHTNYGTRIDYILGDRILVTEEFEDSVLLPEVEG----SDHCPV 326 Query: 258 IVSLDIPEPRKKQQDSTSQNMKP 280 L + P Sbjct: 327 RAVLKSTLMAAPKCPPFCTKYLP 349 >gi|328719125|ref|XP_001944002.2| PREDICTED: putative neutral sphingomyelinase-like [Acyrthosiphon pisum] Length = 380 Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 42/294 (14%), Positives = 89/294 (30%), Gaps = 31/294 (10%) Query: 4 VT--VATWNVNSIR-------ARIHNLAAWIKENNPDIICLQETKTEDK--NFPFETLQS 52 + + T N+ ++ AR+ LA + N D++CLQE ED + Sbjct: 1 MKLSIFTLNIWGLKLTSKDRNARVRALADSLTNNGYDVVCLQELWCEDDYKHLKASCDNV 60 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 Y +G+ I+S+Y I+ + H + + + F L Sbjct: 61 FKYIHYFHSGMLGSGMCIMSRYPIIDHLYHSFILNGYLHMFWHGDWFGGKGIGL------ 114 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 + D + + ++ + + N+I + + D Sbjct: 115 --CRINVEGFIVDVYTTHLHACYNASNDKYTNHRIIQAFETANLIRVTSSGSDLAVLAGD 172 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF----WDYYADSWSKNKGIRIDHIML 228 D+ + + Y++ Y + + RID+I+ Sbjct: 173 LNSNPNDICYKLICLGANMIDSYSSCLNNSIEYTYSHPENSYKDANEIND---RIDYILY 229 Query: 229 SPEATSLL-----HSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQN 277 +L+ + P SDH P+ +I + + ++N Sbjct: 230 KSNEKNLVVVKEHRHSLPHRVPGQDFSYSDHEPIEAVFEISRNTLSIERNITKN 283 >gi|307752095|gb|ADN93066.1| putative DNA lyase [Arthroderma benhamiae] Length = 588 Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 27/85 (31%), Gaps = 17/85 (20%) Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK--------- 244 +Y+ W+ ++ N G RID+I+ S S + I Sbjct: 223 CREFHPSRTGMYTCWNQKVNARPGNYGSRIDYILCSDNIRSWFVESNIQEGLIVCVKLEL 282 Query: 245 --------PRGWTKPSDHTPVIVSL 261 + SDH PV S+ Sbjct: 283 TYRSFKNLLISNEQGSDHCPVYASI 307 >gi|302505072|ref|XP_003014757.1| DNA lyase Apn2 [Arthroderma benhamiae CBS 112371] gi|291178063|gb|EFE33854.1| DNA lyase Apn2 [Arthroderma benhamiae CBS 112371] Length = 601 Score = 67.5 bits (163), Expect = 2e-09, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 27/85 (31%), Gaps = 17/85 (20%) Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK--------- 244 +Y+ W+ ++ N G RID+I+ S S + I Sbjct: 223 CREFHPSRTGMYTCWNQKVNARPGNYGSRIDYILCSDNIRSWFVESNIQEGLIVCVKLEL 282 Query: 245 --------PRGWTKPSDHTPVIVSL 261 + SDH PV S+ Sbjct: 283 IYRSFKNLLISNEQGSDHCPVYASI 307 >gi|23098760|ref|NP_692226.1| hypothetical protein OB1305 [Oceanobacillus iheyensis HTE831] gi|22776987|dbj|BAC13261.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831] Length = 373 Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 43/278 (15%), Positives = 79/278 (28%), Gaps = 51/278 (18%) Query: 4 VTVATWNVNSIRAR---------IHNLAAWIKENNPDIICLQETKTE---DKNFPFETLQ 51 + V T+NV A I LA I + + DII LQE NF + Sbjct: 36 LKVGTFNV----AAGTGLDGEYNIDRLADTISDLDVDIIGLQEVDVHWGYRSNFDHMMEE 91 Query: 52 -----SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 + Y+ + ++ + +++ P D + + +T N Sbjct: 92 LASRLDMEYYFAPIYDLAPVNEGDPNRQYGVGVLSKYPIVDAENRKITRLSTQVPNPFPT 151 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 R N + R + + I + N Sbjct: 152 REPGFLQAKINVEGAEVMFYVTHLDYRGDPTIREMQVADMQEIMSEG-----------NY 200 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDH 225 I D + ++ + D +++ N RID+ Sbjct: 201 NILVGDMNARPNATEIGPLFRDFVDVWGVH------------DTDGNTFPAHNPDRRIDY 248 Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 I+ S + +A + + SDH PV ++I Sbjct: 249 ILASKRME--VKTAEVKNEVES----SDHLPVTAEIEI 280 >gi|308803490|ref|XP_003079058.1| APEX nuclease (ISS) [Ostreococcus tauri] gi|116057512|emb|CAL51939.1| APEX nuclease (ISS) [Ostreococcus tauri] Length = 524 Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 36/302 (11%), Positives = 74/302 (24%), Gaps = 61/302 (20%) Query: 6 VATWNVNSIR----------ARIHNLAA-----------WIKENNPDI--ICLQETKTED 42 +A+WNV +R +R + A ++ D+ C+QETK Sbjct: 44 IASWNV-GLRGWRAMTDASRSRARAVDAHGQTRSVPRRGTLRALGADVRVACVQETKMSR 102 Query: 43 KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLP------------------ 84 +F + ++ + + + S Sbjct: 103 LDFERRG-READWDCAHSACDARDKRSGYSGVAIYWRSRETCPVAIEEGVCGTRTKAESA 161 Query: 85 GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY----------------DDKI 128 + E ++ G + Y D K Sbjct: 162 IWPNERPPLVDEDYARAKALDDEGRAIWADFGEFVLCNLYAPTTYGAVDEKVAERIDFKR 221 Query: 129 SWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN 188 +++ + +I GD+NI P + L Sbjct: 222 DFLRALEERLTSLRSRGRRVIMCGDWNIAPNWKLDRAHDDPRAVEPKNESREWLTRVLGQ 281 Query: 189 MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGW 248 G D R H ++ W+ + + + G RID+ + + + Sbjct: 282 DGMCDVFREVHPNVKAFTCWNVASGAQINDYGSRIDYFLCDRDTLGHVQGVG--DDAMWR 339 Query: 249 TK 250 + Sbjct: 340 ER 341 >gi|325845459|ref|ZP_08168750.1| putative exodeoxyribonuclease III [Turicibacter sp. HGF1] gi|325488478|gb|EGC90896.1| putative exodeoxyribonuclease III [Turicibacter sp. HGF1] Length = 45 Score = 67.1 bits (162), Expect = 2e-09, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 22/47 (46%), Gaps = 4/47 (8%) Query: 216 SKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 KN G RID+ + S S L ARI G SDH PV + L Sbjct: 2 QKNVGWRIDYFITSKALESRLEDARIYPDVLG----SDHCPVGLQLK 44 >gi|148236271|ref|NP_001085982.1| MGC82982 protein [Xenopus laevis] gi|49115913|gb|AAH73645.1| MGC82982 protein [Xenopus laevis] Length = 441 Score = 67.1 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 52/269 (19%), Positives = 84/269 (31%), Gaps = 28/269 (10%) Query: 4 VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + T N N + + + L IK I +QET + + P Sbjct: 9 LNIYTINANVLNSPWKRKALLQEIKAKKIHIALIQETHYKTDHIPK-------------W 55 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 + I S QP ++ ++ + + S Sbjct: 56 YDKHFSNIIHSTPQPTKVRGTAILIANSLEFELDRIKNDTHGNYSFVKGKIHSEKQTFAS 115 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + E LI GD N P + + +++Q Sbjct: 116 IYLPNAEQNKVMEQICTQLLAFAEGTLILGGDLNTPLDPKIDCSSGT---ASITYKKIKQ 172 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +LQ + D+ R H T Y+ + + N RID+I LS + L A I Sbjct: 173 IKLQLQLLQVMDSWRIHHPTGRDYTHFSHSH-----NTHNRIDYIFLSHDTLDNLRDATI 227 Query: 242 DTKPRGWTKPSDHTPVIVSLDIPEPRKKQ 270 + T SDH+ VI+ L P R KQ Sbjct: 228 E-----ATTWSDHSLVILRLHTPLTRPKQ 251 >gi|294566523|gb|ADF18552.1| endonuclease-reverse transcriptase [Bombyx mori] Length = 977 Score = 67.1 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 47/290 (16%), Positives = 96/290 (33%), Gaps = 27/290 (9%) Query: 2 SVVTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDK--NFPFETLQSLNYHI 57 + + TWNV S++ ++ N+ IK + DI+ + +TK D+ NF + ++ Sbjct: 28 KTLRIGTWNVRSLKQDGKLPNVIKEIKRLHVDILGISDTKWPDQGTNFVSDD------YV 81 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 + ++ + + + R + T + I +Y P G+ Sbjct: 82 LYYSGGDQRLERYGVGILLTKEISKSVINFVPLSNRAMLITLEAKPFNINIVQVYAPTGD 141 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 D + + L + + A + I + ND TL Sbjct: 142 KPVGQIEDLYRAIDTLLKSTKNHELVIVMGDMNAKVGSTITPGVTGAYGLGNRNDRGDTL 201 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYA--DSWSKNKGIRIDHIMLSPEATSL 235 N LY++ D +N+ ID++M++ + Sbjct: 202 IE----FCQDNNLIIANTFFKLPPRRLYTWTSPMHTVDRVVRNQ---IDYVMINRRYRNC 254 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL-----DIPEPRKKQQDSTSQNMKP 280 + A+ G SDH PV+V + + R + + + +P Sbjct: 255 IKKAQTYP---GADIGSDHNPVVVDVACKLKKLQPKRMDGRPNVRKLAEP 301 >gi|302143617|emb|CBI22370.3| unnamed protein product [Vitis vinifera] Length = 2099 Score = 67.1 bits (162), Expect = 3e-09, Method: Composition-based stats. Identities = 39/262 (14%), Positives = 82/262 (31%), Gaps = 31/262 (11%) Query: 1 MSVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 M+ + + +WNV + + I++ D+ C+QETK + ++SL Sbjct: 1 MN-LKMLSWNVRGANDVNKRRIIKSVIRKQKVDLFCIQETKIQ--LMTDRMVKSLGVGRF 57 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + A + + + + Q T+ + + Sbjct: 58 LDWRTIEAAGAAGGILICWDKRSLELLEWEEGQFSISCKFRTVENGAIWVFTGVYGPFTK 117 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + F + R EP GD+N+I + + Sbjct: 118 EDRECL---------WEEFGAIRGLWGEPWCVGGDFNVILSQGER------SRQGRISPA 162 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 +R+ Q + ++ D +++ + + R+D M+SP + Sbjct: 163 MRRFAQVMNDLELVDLPL----QGGTFTW----SGGFQNQAWARLDRFMVSPSWLDQFRN 214 Query: 239 ARIDTKPRGWTKPSDHTPVIVS 260 T+ R SDH P+I+ Sbjct: 215 V---TQKRLSRPISDHFPIIIE 233 >gi|253700139|ref|YP_003021328.1| endonuclease/exonuclease/phosphatase [Geobacter sp. M21] gi|251774989|gb|ACT17570.1| Endonuclease/exonuclease/phosphatase [Geobacter sp. M21] Length = 246 Score = 66.7 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 51/289 (17%), Positives = 83/289 (28%), Gaps = 68/289 (23%) Query: 1 MS-VVTVATWNVNS----------IRARIHNLAAWIKENNPDIICLQETKTEDKNFPF-E 48 MS +V T+NV+S +R +A I NPDI+ LQE D P E Sbjct: 1 MSRTFSVMTYNVHSCIGTDRQLSPLR-----IAEVIDRCNPDIVALQEL---DAGLPRTE 52 Query: 49 TLQSLN---------YHIETCGQKSY----NGVAILSKYQPIEIVTHLPGDDLDVQARFI 95 + + +H + N + S Q I+ R Sbjct: 53 MIDQAHLIAMTLEMSFHFHSSIHLKEGGYGNAILSRSPVQLIKAGAVPTEPLHPSFERRG 112 Query: 96 EATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYN 155 + ++I L G + E P I GD+N Sbjct: 113 AVWAEVELHGVKIQVLATHFGLNRG----ERVCQARAVTSHEWLGHPECLPPAILCGDFN 168 Query: 156 IIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW 215 + +D + R T + Sbjct: 169 ALFGSSVYRLLTRHLHDVQRKV-------------KGRLPRGTWPAQLPF---------- 205 Query: 216 SKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 +RIDH+ ++ + S + P SDH P++V+L++P Sbjct: 206 -----MRIDHLFVTHNL--KVRSVSVPRTPLTRV-ASDHLPLVVTLELP 246 >gi|60392921|sp|P11369|POL2_MOUSE RecName: Full=Retrovirus-related Pol polyprotein LINE-1; AltName: Full=Long interspersed element-1; Short=L1; Includes: RecName: Full=Reverse transcriptase; Includes: RecName: Full=Endonuclease gi|804788|gb|AAA66024.1| 2855 is the position of the first start codon in ORF 2; putative [Mus musculus] Length = 1281 Score = 66.7 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 45/251 (17%), Positives = 76/251 (30%), Gaps = 32/251 (12%) Query: 6 VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + N+N + + I L W+ + +P CLQET +K+ + ++ + G K Sbjct: 17 LISLNINGLNSPIKRHRLTDWLHKQDPTFCCLQETHLREKDRHYLRVKGWKTIFQANGLK 76 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 GVAIL + + I L I + Sbjct: 77 KQAGVAILISDKIDFQPK--------------VIKKDKEGHFILIKGKILQEELSILNIY 122 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + + + + I GD+N D D EV + Sbjct: 123 APNARAATFIRDTLVKLKAYIAPHTIIVGDFNTPLSSKDRSWKQKLNRDTVKLTEVMKQM 182 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 TD R + Y+F+ ++SK IDHI+ + + I Sbjct: 183 ------DLTDIYRTFYPKTKGYTFFSAPHGTFSK-----IDHIIGHKTGLNRYKNIEIVP 231 Query: 244 KPRGWTKPSDH 254 SDH Sbjct: 232 CIL-----SDH 237 >gi|197119100|ref|YP_002139527.1| metal-dependent hydrolase [Geobacter bemidjiensis Bem] gi|197088460|gb|ACH39731.1| metal-dependent hydrolase [Geobacter bemidjiensis Bem] Length = 246 Score = 66.7 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 46/289 (15%), Positives = 77/289 (26%), Gaps = 68/289 (23%) Query: 1 MS-VVTVATWNVNS----------IRARIHNLAAWIKENNPDIICLQETKTEDKNFPF-E 48 MS +V T+NV+S +R +A I NPDI+ LQE D P E Sbjct: 1 MSRTFSVMTYNVHSCIGTDRQLSPLR-----IAEVIDRCNPDIVALQEL---DAGLPRTE 52 Query: 49 TLQSLN---------YHIETCGQKSY----NGVAILSKYQPIEIVTHLPGDDLDVQARFI 95 + + +H + N + S Q I+ R Sbjct: 53 MIDQAHLIAMTLEMSFHFHSSIHLKEGGYGNAILSRSPVQLIKAGAVPTDPLHPSFERRG 112 Query: 96 EATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYN 155 + ++I L G + +L F + Sbjct: 113 ALWAEVELHGVKIQVLATHFGLNRGERVRQARAVTGPEWLGHPECLPPAVLCGDFNALFG 172 Query: 156 IIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW 215 + L +L Sbjct: 173 SSVYRLLTRQLHDVQRKVKGRLPRGTWPAQLPF--------------------------- 205 Query: 216 SKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 +RIDH+ ++ + S + P SDH P++V+L++P Sbjct: 206 -----MRIDHLFVTHNL--KVRSVSVPRNPLTRV-ASDHLPLVVTLELP 246 >gi|313157364|gb|EFR56787.1| endonuclease/exonuclease/phosphatase family protein [Alistipes sp. HGB5] Length = 383 Score = 66.7 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 39/268 (14%), Positives = 71/268 (26%), Gaps = 27/268 (10%) Query: 5 TVATWNV------NSIRARIHNLAAWIKENNPDIICLQETKTE-DKNFPFETLQSLNYHI 57 V T+NV N + + + ++ I ++NPDIICLQE L Y Sbjct: 125 KVMTYNVRGFYGENGL-SSVGDVLQLIGDHNPDIICLQEFNARLAGQSDEFALLDEKYES 183 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 G+ + + L + + A I T+R+ N +L Sbjct: 184 AVFGRTQAPDSLYGAPLVILSKYRILRSGVVLTPGTSVWADLLIGDDTIRVFNNHLRSTA 243 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + + + W + Sbjct: 244 IKAADNDYLTSRGFLSDTAREDKLRSMAGRFRENSVLRAAQVDSIAVVVEAWRSRCIVCG 303 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 + + + S + + + +RID+++ S Sbjct: 304 DFNDTPMSYVYRTMAKGLNDAFSQCG--SGYSHTFRGFFNT--LRIDYVLSSEGF----- 354 Query: 238 SARIDTKPRGWTKP----SDHTPVIVSL 261 + P SDH PV+V L Sbjct: 355 ------DALSYEVPTVDYSDHHPVVVRL 376 >gi|149248308|ref|XP_001528541.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] gi|146448495|gb|EDK42883.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] Length = 503 Score = 66.7 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 6/69 (8%) Query: 203 HLYSFWDYYADSWSKNKGIRIDHIML-SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +Y+ W+ S N G RID I+ S E + +A I G SDH PV Sbjct: 323 KMYTVWNTLTSSRQINYGSRIDLILCNSHEMVKSISNADIWPFILG----SDHCPVFTDF 378 Query: 262 DIPEPRKKQ 270 D+ PRK Sbjct: 379 DL-LPRKDD 386 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 19/48 (39%), Gaps = 9/48 (18%) Query: 4 VTVATWNVNSIRARIH---------NLAAWIKENNPDIICLQETKTED 42 + T+NVN ++ + + A DII LQE K + Sbjct: 21 IRFITFNVNGVKTVFNYHPWNKFNNDFNAMFNSLEADIITLQELKLTE 68 >gi|262198893|ref|YP_003270102.1| endonuclease/exonuclease/phosphatase [Haliangium ochraceum DSM 14365] gi|262082240|gb|ACY18209.1| Endonuclease/exonuclease/phosphatase [Haliangium ochraceum DSM 14365] Length = 300 Score = 66.7 bits (161), Expect = 3e-09, Method: Composition-based stats. Identities = 42/273 (15%), Positives = 77/273 (28%), Gaps = 55/273 (20%) Query: 4 VTVATWNVN--SIRARIHNLAAWIKENNPDIICLQET-----KTEDKNFPFETLQSLNYH 56 V VATWNV + I LA ++E + D++ LQE ++ N P +++ Sbjct: 65 VRVATWNVAIAGF-SSIDTLARELREIDADVVLLQELEVGARRSGRVNQPRALAEAMGMD 123 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 Y+G L +++ + + + G Sbjct: 124 YAFAPSVPYDGGIFGLTV-------------LTRLPLARAERHSLDGEIVYEPRIAFEVG 170 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + + ++ + + L G P D Sbjct: 171 ACAGA--LELRLIDVHAEYVPETNTDNLARLAELIGPVGDQPIAVA--------GDLNTR 220 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 L + G D +Y ID+++ SP ++ Sbjct: 221 PANAGIVALLADTGLVDLFHEEGGEPAIY-----------------IDYVLASPPLAEIV 263 Query: 237 H-SARIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268 S R+D+ SDH P+ V D+ Sbjct: 264 RESVRVDSD------ASDHAPLWVEFDLSAWAD 290 >gi|16508047|gb|AAL17972.1| pORF2 [Mus musculus domesticus] Length = 1281 Score = 66.7 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 45/251 (17%), Positives = 76/251 (30%), Gaps = 32/251 (12%) Query: 6 VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + N+N + + I L W+ + +P CLQET +K+ + ++ + G K Sbjct: 17 LISLNINGLNSPIKRHRLTDWLHKQDPTFCCLQETHLREKDRHYLRVKGWKTIFQANGLK 76 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 GVAIL + + I L I + Sbjct: 77 KQAGVAILISDKIDLQPK--------------VIKKDKEGHFILIKGKILQEELSILNIY 122 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + + + + I GD+N D D EV + Sbjct: 123 APNARAATFIRDTLVKLKAYIAPHTIIVGDFNTPLSSKDRSWKQKLNRDTVKLTEVMKQM 182 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 TD R + Y+F+ ++SK IDHI+ + + I Sbjct: 183 ------DLTDIYRTFYPKTKEYTFFSAPHGTFSK-----IDHIIGHKTGLNRYKNIEIVP 231 Query: 244 KPRGWTKPSDH 254 SDH Sbjct: 232 CIL-----SDH 237 >gi|326511341|dbj|BAJ87684.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 306 Score = 66.7 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 37/245 (15%), Positives = 66/245 (26%), Gaps = 23/245 (9%) Query: 50 LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 + K + K + V+ L + Sbjct: 64 FKDYRVWWSLSDSKYAGTAVFMKKKFEPKKVSFNLDRTSSKHDADGRVIIVEFESFLLLN 123 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII- 168 +G + + W KR L F Q ++PLI+ GD N+ D +P Sbjct: 124 TYAPNNGWKEEENSFQRRRKWDKRMLEFVQQV---DKPLIWCGDLNVSHGEIDVSHPDFF 180 Query: 169 -----WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF----------WDYYAD 213 + Q L I + Y + + + + Sbjct: 181 SDAKLNGYIPPNKEDCGQPGFTLAERQRFGNILSQGKLVDAYRYLHKEKDMECGFSWSGN 240 Query: 214 SWSKNKG--IRIDHIMLSPEATSLLHSARIDTK--PRGWTKPSDHTPVIVSLDIPEPRKK 269 K +G +RID+ ++S + S + SDH PV + L Sbjct: 241 PIGKYRGKRMRIDYFVVSEGLKDRIVSCEMHGHGIELEGFYGSDHCPVSLELSKEAAEAP 300 Query: 270 QQDST 274 + S+ Sbjct: 301 ESKSS 305 >gi|153805804|ref|ZP_01958472.1| hypothetical protein BACCAC_00041 [Bacteroides caccae ATCC 43185] gi|149130481|gb|EDM21687.1| hypothetical protein BACCAC_00041 [Bacteroides caccae ATCC 43185] Length = 368 Score = 66.7 bits (161), Expect = 4e-09, Method: Composition-based stats. Identities = 35/276 (12%), Positives = 86/276 (31%), Gaps = 36/276 (13%) Query: 4 VTVATWNV-NSIRARIHN----LAAWIKENNPDIICLQETKT-------EDKNFPFETLQ 51 + + ++NV N + + +++ + DIICLQE + + + L+ Sbjct: 108 IKILSYNVMNFSNLEKKDGKNPILSYLVNSKADIICLQEYNAAQNKKYLTEADI-KKALK 166 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 + Y+ +S +A SKY + + + +++ +N T+ + N Sbjct: 167 AYPYYSVRRQNRSDVQLACFSKYPILSVSPIDYESTYNGSVKYV---LAVNNDTVTLINN 223 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 +L + + +++++ + + + Sbjct: 224 HLESNKLTKEDRGMYEDMIK----DPNAKKVKTGLRQLVKKLAEASAIRASQADSVNKAI 279 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYS------FWDYYADSWSKNKGIRIDH 225 + T ++ Y + + RID+ Sbjct: 280 TESKYPTIIACGDFNDGSISYTHRILTQKLDDAFTQSGKGLGISYNQNKFY----FRIDN 335 Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 I++SP + + +D K SDH P+ + Sbjct: 336 ILISPNLKAY--NCTVDRSI----KASDHYPIWCHI 365 >gi|241949837|ref|XP_002417641.1| DNA repair (apurinic or apyrimidinic site) lyase 2, putative; apurinic-apyrimidinic endonuclease 2, putative [Candida dubliniensis CD36] gi|223640979|emb|CAX45326.1| DNA repair (apurinic or apyrimidinic site) lyase 2, putative [Candida dubliniensis CD36] Length = 422 Score = 66.3 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 5/70 (7%) Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSP-EATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +Y+ W+ ++ N G RID I+ S + + +A I G SDH PV Sbjct: 320 KMYTVWNTLTNARQVNHGSRIDLILFSDLKMVQRISNADIWPFLMG----SDHCPVFTDC 375 Query: 262 DIPEPRKKQQ 271 DI E Sbjct: 376 DISENDDNSS 385 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 19/50 (38%), Gaps = 9/50 (18%) Query: 2 SVVTVATWNVNSIRARI---------HNLAAWIKENNPDIICLQETKTED 42 S + T+NVN ++ + A DII LQE K + Sbjct: 23 STIRYVTFNVNGVKTIFNYHPWNQFNKDFNALFNSLQADIITLQELKLTE 72 >gi|313159067|gb|EFR58442.1| endonuclease/exonuclease/phosphatase family protein [Alistipes sp. HGB5] Length = 348 Score = 66.3 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 43/267 (16%), Positives = 81/267 (30%), Gaps = 34/267 (12%) Query: 4 VTVATWNVNSIR--------ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55 + +AT NVN R A +A ++ D++CLQE +D FP +++ +L Sbjct: 104 IRIATLNVNGFRQLGPKSITAAA--VAEMMRHEQVDVLCLQEF-LDDGEFPADSIGAL-- 158 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + + + I+ D ++ A + TLRI +++L Sbjct: 159 --FSRRMPYFVSEGNGAVASRYPILDCKYVRFPDTSNDYLRADLLVEGDTLRIFSVHLQT 216 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + K + + ++ + A I + P+I D Sbjct: 217 SGIAQLRRRFQKDYNREAPVDSMLGAVDRNSRIRAAQVREIRAETDASPYPVILAGDFND 276 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG-IRIDHIMLSPEATS 234 T + + + Y ++ G +RID++ Sbjct: 277 TPSSYTYREMKGALT-----DGFRRCGNGY------GGTFRYLGGLLRIDYVFYDDTF-- 323 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261 SDH VI L Sbjct: 324 -----ECVRYYMPSEVVSDHKVVIAEL 345 >gi|209553980|gb|AAA39398.2| ORF2 [Mus musculus domesticus] Length = 1300 Score = 66.3 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 46/251 (18%), Positives = 77/251 (30%), Gaps = 32/251 (12%) Query: 6 VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + N+N + + I L W+ + +P CLQET +K+ + ++ + G K Sbjct: 36 LISLNINGLNSPIKRHRLTDWLHKQDPTFCCLQETHLREKDRHYLRVKGWKTTFQANGLK 95 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 GVAIL + + I L I + Sbjct: 96 KQAGVAILISDKIDFQPK--------------VIKKDKEGHFILIKGKILQEELSILNIY 141 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + + + + I GD+N D D EV + Sbjct: 142 APNARAATFIRDTLVKLKAYIAPHTIIVGDFNTPLSSKDRSWKQKLNRDTVKLTEVMKQM 201 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 TD RA + Y+F+ ++SK IDHI+ + + I Sbjct: 202 ------DLTDIYRAFYPKTKGYTFFSAPHGTFSK-----IDHIIGHKTGLNRYKNIEIVP 250 Query: 244 KPRGWTKPSDH 254 SDH Sbjct: 251 CIL-----SDH 256 >gi|34392589|dbj|BAC82628.1| pol-like protein [Anopheles gambiae] Length = 1077 Score = 66.3 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 48/277 (17%), Positives = 88/277 (31%), Gaps = 44/277 (15%) Query: 6 VATWNVNSIRAR--IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 +A+ N+N+I + + L +I+ + D+I LQE D P Y++ + Sbjct: 18 IASININTISSATKLEALKTFIRTMDLDVIFLQEVYHTDLALP-------GYNVLSNVDA 70 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 S G AI + +E + +R+ N+ S Sbjct: 71 SRRGTAIALRDHLKF--------------SHVERSLDSRLICVRLENIATLCNVYAPSGS 116 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 A +I AGD+N + + D Sbjct: 117 QRGAEREEFFNRTVAFYLRNACPHVILAGDFNCVLKSKDV---------TGGGNFSLALR 167 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + +MG +D+ A +S+ G RID +S + L + + Sbjct: 168 NAVNSMGMSDSWEALRGNSVEFSYIT-------SGSGSRIDRCYVSSSLETQLRTTDMH- 219 Query: 244 KPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 SDH + V L +P P + ++ ++P Sbjct: 220 ----VLSFSDHKALTVRLCLPTPPNRLTNNGYWQLRP 252 >gi|558908|gb|AAA67727.1| reverse transcriptase [Mus musculus] Length = 1281 Score = 66.3 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 45/251 (17%), Positives = 76/251 (30%), Gaps = 32/251 (12%) Query: 6 VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + N+N + + I L W+ + +P CLQET +K+ + ++ + G K Sbjct: 17 LISLNINGLNSPIKRHRLTDWLHKQDPTFCCLQETHLREKDRHYLRVKGWKTIFQANGLK 76 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 GVAIL + + I L I + Sbjct: 77 KQAGVAILILDKIDFQPK--------------VIKKDKEGHFILIKGKILQEELSILNIY 122 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + + + + I GD+N D D EV + Sbjct: 123 APNARAATFIRDTLVKLKAYIAPHTIIVGDFNTPLSSKDRSWKQKLNRDTVKLTEVMKQM 182 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 TD R + Y+F+ ++SK IDHI+ + + I Sbjct: 183 ------DLTDIYRTFYPKTKGYTFFSAPHGTFSK-----IDHIIGHKTGLNRYKNIEIVP 231 Query: 244 KPRGWTKPSDH 254 SDH Sbjct: 232 CIL-----SDH 237 >gi|149041085|gb|EDL95042.1| rCG20251 [Rattus norvegicus] Length = 475 Score = 66.3 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 76/251 (30%), Gaps = 32/251 (12%) Query: 6 VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + N+N + + I L WI+ +P CLQET DK+ + ++ + GQK Sbjct: 12 LISLNINGLNSPIKRHRLTNWIRNEDPAFCCLQETHLRDKDRHYLRVKGWKTTFQANGQK 71 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 GVAIL + + + I I + Sbjct: 72 KQAGVAILISNKINF--------------QLKVIKKDKEGHFIFIKGKIHQDELSILNIY 117 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + + + + I GD+N D +D EV Sbjct: 118 APNTRAPTYVKETLLKLKTHIAPHTIIVGDFNTPLSSMDRSWKQKLNSDVDRLREVMNQM 177 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 TD R + Y+F+ ++SK IDHI+ + I Sbjct: 178 ------DLTDIYRTFYPKAKGYTFFSAPHGTFSK-----IDHIIGQKTGLNRYRKIEIIP 226 Query: 244 KPRGWTKPSDH 254 SDH Sbjct: 227 -----CMLSDH 232 >gi|260941766|ref|XP_002615049.1| hypothetical protein CLUG_05065 [Clavispora lusitaniae ATCC 42720] gi|238851472|gb|EEQ40936.1| hypothetical protein CLUG_05065 [Clavispora lusitaniae ATCC 42720] Length = 404 Score = 66.3 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 5/62 (8%) Query: 204 LYSFWDYYADSWSKNKGIRIDHIMLS-PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 +Y+ W+ + N G RID I+ S E + +A I G SDH PV +D Sbjct: 113 MYTVWNTRTGARQANFGSRIDLILASGGEFIRNVVNADILPFLYG----SDHAPVFTDVD 168 Query: 263 IP 264 + Sbjct: 169 VS 170 >gi|297200389|ref|ZP_06917786.1| endonuclease/exonuclease/phosphatase [Streptomyces sviceus ATCC 29083] gi|197709508|gb|EDY53542.1| endonuclease/exonuclease/phosphatase [Streptomyces sviceus ATCC 29083] Length = 275 Score = 66.3 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 43/277 (15%), Positives = 74/277 (26%), Gaps = 23/277 (8%) Query: 1 MSVVTVATWNVNSIR-----ARIHNLAAWIKENNPDIICLQETK-TEDKNFPFETLQSLN 54 MS + V TWN+ R AR + A ++E PD++ LQE +N L Sbjct: 1 MSAMRVVTWNLW-WRFGPWEARQKAILAALRELRPDVVGLQEVWSAGSENLAEWLAGELG 59 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 H + +E+ + + + + R+ Sbjct: 60 LHWAWAASPASERWQRRIGDPGVEVGNAVLSRWPVIDRAVLRLPAPEDLDDGRLAFHTRL 119 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 G + ++ Q++ + P + W + Sbjct: 120 AGPSYDIPFFTTHLTSAPTASAIRCQQVTALAEFVATHRSGTDFPPVITGDFNAWPDSDE 179 Query: 175 FTLEVRQSF-QKLQNMGFTDAIRATHDTHHLYSF---WDYYADSWSKNKGIRIDHIMLSP 230 L F DA + T ++ Y S RID+I + Sbjct: 180 IRLFGGYKTAPAAPGQLFLDAWEYANPTAPSATWDPANPYVRMSPPA----RIDYIHV-- 233 Query: 231 EATSLLHSARIDTKPRGWTK------PSDHTPVIVSL 261 + R PSDH V+ L Sbjct: 234 GLAGPAGLGHVLKVRRAGDGPVDGVWPSDHLAVVADL 270 >gi|255567610|ref|XP_002524784.1| hydrolase, putative [Ricinus communis] gi|223535968|gb|EEF37627.1| hydrolase, putative [Ricinus communis] Length = 523 Score = 66.3 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 48/288 (16%), Positives = 95/288 (32%), Gaps = 26/288 (9%) Query: 6 VATWNV-NSI-----RARIHNLAAWIKENNPDIICLQETKTEDKN--FPFETLQ---SLN 54 +++ NV N + R+R + +KE + DI+ LQ+ K E++ P L +N Sbjct: 227 ISSRNVVNGVDRDNYRSR-RTVVEVLKELDADILALQDVKAEEEKEMKPLSDLAAALGMN 285 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 Y + G AILSK+ DD D + + + +L Sbjct: 286 Y-VFAESWAPEYGNAILSKWPIKRWEVQKIFDDTDFRNVLKATIDAPQKGEVNLYCTHLD 344 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLEL-EEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 H + K + I + L +E A + I + H+ + + Sbjct: 345 HLDENWRMKQINAIIQSTDGPHILAGGLNSLDETDYSAERWTDIVKYHEEIGKPTPKVEV 404 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 L+ + + G +++ ++ G R+D+I+ S + Sbjct: 405 MGFLKSKHYTDAKEFAGECESVVMIAKGQNV------QGTCK---YGTRVDYILASSNSP 455 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSL-DIPEPRKKQQDSTSQNMKP 280 SDH V V + + +++ + +P Sbjct: 456 YKFVPGS--YSVYSSKGTSDHHIVKVDIVKVSSSSSDRENVARKRRQP 501 >gi|34392563|dbj|BAC82611.1| pol-like protein [Danio rerio] Length = 1267 Score = 66.3 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 41/262 (15%), Positives = 80/262 (30%), Gaps = 26/262 (9%) Query: 1 MSVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 M ++ V + N N +R L I+ ++I LQET + N L + Sbjct: 19 MEILRVGSLNTNGLRDEKKRNLLLESIRIKQLNVIFLQETHSNSNNEAEWGLCWKGEKVL 78 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + G GVAIL + + +L ++ + + Sbjct: 79 SHGTNLSAGVAILFSSALKVQILMINEIELGRLVAVRAKINDLSFLFINVYAQNNGADRL 138 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + + + + + +I GD+N ++ Sbjct: 139 KLFSNLECFLKQQQD-----------GDFIIIGGDWNCTLD-----FKYDRNSEEPHMQS 182 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 + L+N F+D R + + Y++ + G R+D +S + + Sbjct: 183 ASRLAGILKNQYFSDVWREQNASIKQYTWVKINDGRF---SGARLDRFYVSNNVKNRVVG 239 Query: 239 ARIDTKPRGWTKPSDHTPVIVS 260 A I SDH + V Sbjct: 240 ANIIPS-----FLSDHKLITVE 256 >gi|302664446|ref|XP_003023853.1| DNA lyase Apn2 [Trichophyton verrucosum HKI 0517] gi|291187871|gb|EFE43235.1| DNA lyase Apn2 [Trichophyton verrucosum HKI 0517] Length = 588 Score = 66.3 bits (160), Expect = 4e-09, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 27/85 (31%), Gaps = 17/85 (20%) Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK--------- 244 +Y+ W+ ++ N G RID+I+ S S + I Sbjct: 223 CREFHPSRTGMYTCWNQKVNARPGNYGSRIDYILCSDNIRSWFVESNIQEGLIVCVKFGL 282 Query: 245 --------PRGWTKPSDHTPVIVSL 261 + SDH PV S+ Sbjct: 283 ISPSFNNLLIPNEQGSDHCPVYASI 307 >gi|326675025|ref|XP_003200252.1| PREDICTED: transposon TX1 uncharacterized 149 kDa protein-like [Danio rerio] Length = 1297 Score = 66.3 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 36/252 (14%), Positives = 74/252 (29%), Gaps = 29/252 (11%) Query: 6 VATWNVNSIRARIH--NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 VA+ NVN R + IK+ D++C+QET ++ N + I + Sbjct: 6 VASLNVNGARDIRKRYQIYEIIKQKRIDVLCIQETHSDALNSSDWGKEFDGLSILSHLNS 65 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 + +GVAIL + + + + + + + N + Sbjct: 66 TSSGVAILFSKSFVPVSYQVDEVIKGRLLKVDAQFEKYSFIFICVYV----PVNALERMV 121 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + D +S + + + + ++ Sbjct: 122 FLDTLSNVLSNCDTDKVLFLGGDFNCTESMLDRNHVEPHMAS-------------QKRLI 168 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARID 242 Q ++ D R + + Y++ A + + R+D +L S I Sbjct: 169 QLIKTHEIVDVWRNFNGSQRQYTW----AHARDNLISLARLDRFYCFKHQFNLFRSCSIC 224 Query: 243 TKPRGWTKPSDH 254 SDH Sbjct: 225 P-----VSFSDH 231 >gi|189461652|ref|ZP_03010437.1| hypothetical protein BACCOP_02315 [Bacteroides coprocola DSM 17136] gi|189431624|gb|EDV00609.1| hypothetical protein BACCOP_02315 [Bacteroides coprocola DSM 17136] Length = 360 Score = 66.3 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 35/252 (13%), Positives = 66/252 (26%), Gaps = 29/252 (11%) Query: 21 LAAWIKENNPDIICLQE----TKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQP 76 + ++++++ DIICLQE K + K L YH+ G+ Sbjct: 125 VLNYLRDSDADIICLQEFNPSAKVKQKEIDR-ALACYPYHVRVKGEGPGRLACYSRYPIL 183 Query: 77 IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 ++ + N + + +K Sbjct: 184 SAETIDY-----KTESNASILYRLKFGNDTLVLINNHLESNKLDAHDKTVYNDILKSPRE 238 Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIR 196 + A + D I N + L + + Sbjct: 239 KNIKNGGKHLFHKIAKVVAVRAPQADSVAQAIAVNRTRYMLVCGDFNDSPISYAHRVVGQ 298 Query: 197 ATHDTHHL------YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 +D + +++++ RIDHI S + +ID Sbjct: 299 GLNDVYRKAGRGPGFTYYENRFY-------FRIDHIFASDAF--RILECKIDRSI----N 345 Query: 251 PSDHTPVIVSLD 262 SDH PV L+ Sbjct: 346 TSDHYPVWCLLE 357 >gi|39652285|dbj|BAD04856.1| reverse transcriptase [Takifugu rubripes] Length = 1154 Score = 66.3 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 35/265 (13%), Positives = 75/265 (28%), Gaps = 31/265 (11%) Query: 3 VVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 + ++T NV S+R+R+ + +++ D+ LQE L + Sbjct: 2 TLNISTINVRSVRSRVRAQSVLSFLSSFKSDVFLLQEC-------------GLPFLNHYR 48 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + L + + Q +T N + L ++ I Sbjct: 49 QWEEMWPQTSLWSGSNENRNDGVAILIKNPQVLVKGSTVVKNGRALLTHLTFMGQDFKIL 108 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + ++ + L + PL+ GD+N I + D Sbjct: 109 NIYGFNEKNDRYDLLEDLQSHMLGRVPLVVGGDFNCIL---SRKDRRRTGEDFKVDKTSV 165 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 ++ D + H ++++ + RID++ Sbjct: 166 LLQGICRDFKLQDCFKTMHPREEGFTWFSGDGT-----RASRIDYVFT--------RDCP 212 Query: 241 IDTKPRGWTKPSDHTPVIVSLDIPE 265 SDH + +L +P Sbjct: 213 ATDARLTPVFFSDHLMLSCTLSLPS 237 >gi|326671079|ref|XP_003199357.1| PREDICTED: transposon TX1 uncharacterized 149 kDa protein-like, partial [Danio rerio] Length = 1298 Score = 66.3 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 36/252 (14%), Positives = 74/252 (29%), Gaps = 29/252 (11%) Query: 6 VATWNVNSIRARIH--NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 VA+ NVN R + IK+ D++C+QET ++ N + I + Sbjct: 7 VASLNVNGARDIRKRYQIYEIIKQKRIDVLCIQETHSDALNSSDWGKEFDGLSILSHLNS 66 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 + +GVAIL + + + + + + + N + Sbjct: 67 TSSGVAILFSKSFVPVSYQVDEVIKGRLLKVDAQFEKYSFIFICVYV----PVNALERMV 122 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + D +S + + + + ++ Sbjct: 123 FLDTLSNVLSNCDTDKVLFLGGDFNCTESMLDRNHVEPHMAS-------------QKRLI 169 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARID 242 Q ++ D R + + Y++ A + + R+D +L S I Sbjct: 170 QLIKTHEIVDVWRNFNGSQRQYTW----AHARDNLISLARLDRFYCFKHQFNLFRSCSIC 225 Query: 243 TKPRGWTKPSDH 254 SDH Sbjct: 226 P-----VSFSDH 232 >gi|56525|emb|CAA43595.1| unnamed protein product [Rattus norvegicus] Length = 500 Score = 66.3 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 76/251 (30%), Gaps = 32/251 (12%) Query: 6 VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + N+N + + I L WI+ +P CLQET DK+ + ++ + GQK Sbjct: 37 LISLNINGLNSPIKRHRLTNWIRNEDPAFCCLQETHLRDKDRHYLRVKGWKTTFQANGQK 96 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 GVAIL + + + I I + Sbjct: 97 KQAGVAILISNKINF--------------QLKVIKKDKEGHFIFIKGKIHQDELSILNIY 142 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + + + + I GD+N D +D EV Sbjct: 143 APNTRAPTYVKETLLKLKTHIAPHTIIVGDFNTPLSSMDRSWKQKLNSDVDRLREVMSQM 202 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 TD R + Y+F+ ++SK IDHI+ + I Sbjct: 203 ------DLTDIYRTFYPKAKGYTFFSAPHGTFSK-----IDHIIGQKTGLNRYRKIEIIP 251 Query: 244 KPRGWTKPSDH 254 SDH Sbjct: 252 -----CMLSDH 257 >gi|34541082|ref|NP_905561.1| AP endonuclease domain-containing protein [Porphyromonas gingivalis W83] gi|34397397|gb|AAQ66460.1| AP endonuclease domain protein [Porphyromonas gingivalis W83] Length = 310 Score = 66.3 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 46/282 (16%), Positives = 87/282 (30%), Gaps = 42/282 (14%) Query: 2 SVVTVATWNVNSIRARIHN------LAAWIKENNPDIICLQE-------------TKTED 42 S + V T+NV R HN + +IK + DI+CLQE +T Sbjct: 46 SRIKVMTYNVKGFDFRAHNSENPNPILKYIKGSGADIVCLQEAVLSRKSNSRYVGLRTFK 105 Query: 43 KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN 102 K P L + +G+ +LSKY +++ + + T I Sbjct: 106 KYLPEYRYMEL---SHAREDRKGSGLMLLSKYPILDVHRIPYESAFNGSTAY---TVDIQ 159 Query: 103 TQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD 162 + + + N +L + + + S+ + + + + Sbjct: 160 GRKVLVVNNHLESFRLTMADGTEYLKMVREGEAAALSRMMTAKMGPAY-ALRAVQADSVS 218 Query: 163 CYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG-- 220 Y + + ++ + ++ N+G Sbjct: 219 HYIRCSESEHVIVCGDFNDTPISYARHKIASGLKDAYSDTG-------RGPGFTFNQGAF 271 Query: 221 -IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +RIDHI+ S + + +D SDH PV L Sbjct: 272 KVRIDHILYSSGFLAY--NCTVDKSV----HASDHFPVWCYL 307 >gi|149021375|gb|EDL78838.1| rCG59047 [Rattus norvegicus] Length = 475 Score = 66.3 bits (160), Expect = 5e-09, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 76/251 (30%), Gaps = 32/251 (12%) Query: 6 VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + N+N + + I L WI+ +P CLQET DK+ + ++ + GQK Sbjct: 12 LISLNINGLNSPIKRHRLTNWIRNEDPAFCCLQETHLRDKDRHYLRVKGWKTTFQANGQK 71 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 GVAIL + + + I I + Sbjct: 72 KQAGVAILISNKINF--------------QLKVIKKDKEGHFIFIKGKIHQDELSILNIY 117 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + + + + I GD+N D +D EV Sbjct: 118 APNTRAPTYVKETLLKLKTHIAPHTIIVGDFNTPLSSMDRSWKQKLNSDVDRLREVMSQM 177 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 TD R + Y+F+ ++SK IDHI+ + I Sbjct: 178 ------DLTDIYRTFYPKAKGYTFFSAPHGTFSK-----IDHIIGQKTGLNRYRKIEIIP 226 Query: 244 KPRGWTKPSDH 254 SDH Sbjct: 227 -----CMLSDH 232 >gi|148654820|ref|YP_001275025.1| endonuclease/exonuclease/phosphatase [Roseiflexus sp. RS-1] gi|148566930|gb|ABQ89075.1| Endonuclease/exonuclease/phosphatase [Roseiflexus sp. RS-1] Length = 348 Score = 66.0 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 44/258 (17%), Positives = 79/258 (30%), Gaps = 29/258 (11%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETK-TEDKNFPFETLQSLNYHIETCGQK 63 V T+N+N R + A I+ PDII LQE + + Y + Q Sbjct: 113 RVMTFNINGGNERTDRVLAAIRAAQPDIIALQELNPSIAAALERDLKNEYPYQLL-DPQW 171 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 G+ I+S++ + LPGD + +E QT+ + N + + Sbjct: 172 GVTGMGIISRFPLRPLAARLPGDRWIGAPQAVEID--TPGQTITLLNFHAIPPVGPSEYM 229 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 ++ + P++ AGD N P + + + Sbjct: 230 TAAIGERERQAEAINAFVQAQRTPVVVAGDMNATPFHRAYHILEHGALSDVWRECGSGAG 289 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + ++ +RIDH+ + A + Sbjct: 290 FTWPGNRTIGGVPVLP-------WF------------VRIDHLFTTNGIV--CLDASVGP 328 Query: 244 KPRGWTKPSDHTPVIVSL 261 W SDH V+ +L Sbjct: 329 ----WDGVSDHRAVVATL 342 >gi|16508044|gb|AAL17970.1| pORF2 [Mus musculus domesticus] Length = 1281 Score = 66.0 bits (159), Expect = 5e-09, Method: Composition-based stats. Identities = 45/251 (17%), Positives = 76/251 (30%), Gaps = 32/251 (12%) Query: 6 VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + N+N + + I L W+ + +P CLQET +K+ + ++ + G K Sbjct: 17 LISLNINGLNSPIKRHRLTDWLHKQDPTFCCLQETHLREKDRHYLRVKGWKTIFQGNGLK 76 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 GVAIL + + I L I + Sbjct: 77 KQAGVAILISDKIDFQPK--------------VIKKDKEGHFILIKGKILQEELSILNIY 122 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + + + + I GD+N D D EV + Sbjct: 123 APNARAATFIRDTLVKLKAYIAPHTIIVGDFNTPLSSKDRSWKQKLNRDTVKLTEVMKQM 182 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 TD R + Y+F+ ++SK IDHI+ + + I Sbjct: 183 ------DLTDIYRTFYPKTKGYTFFSAPHGTFSK-----IDHIIGHKTGLNRYKNIEIVP 231 Query: 244 KPRGWTKPSDH 254 SDH Sbjct: 232 CIL-----SDH 237 >gi|326670677|ref|XP_003199268.1| PREDICTED: transposon TX1 uncharacterized 149 kDa protein-like [Danio rerio] Length = 1326 Score = 66.0 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 36/252 (14%), Positives = 74/252 (29%), Gaps = 29/252 (11%) Query: 6 VATWNVNSIRARIH--NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 VA+ NVN R + IK+ D++C+QET ++ N + I + Sbjct: 35 VASLNVNGARDIRKRYQIYEIIKQKRIDVLCIQETHSDALNSSDWGKEFDGLSILSHLNS 94 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 + +GVAIL + + + + + + + N + Sbjct: 95 TSSGVAILFSKSFVPVSYQVDEVIKGRLLKVDAQFEKYSFIFICVYV----PVNALERMV 150 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + D +S + + + + ++ Sbjct: 151 FLDTLSNVLSNCDTDKVLFLGGDFNCTESMLDRNHVEPHMAS-------------QKRLI 197 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARID 242 Q ++ D R + + Y++ A + + R+D +L S I Sbjct: 198 QLIKTHEIVDVWRNFNGSQRQYTW----AHARDNLISLARLDRFYCFKHQFNLFRSCSIC 253 Query: 243 TKPRGWTKPSDH 254 SDH Sbjct: 254 P-----VSFSDH 260 >gi|326675779|ref|XP_003200431.1| PREDICTED: transposon TX1 uncharacterized 149 kDa protein-like [Danio rerio] Length = 1326 Score = 66.0 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 36/252 (14%), Positives = 74/252 (29%), Gaps = 29/252 (11%) Query: 6 VATWNVNSIRARIH--NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 VA+ NVN R + IK+ D++C+QET ++ N + I + Sbjct: 35 VASLNVNGARDIRKRYQIYEIIKQKRIDVLCIQETHSDALNSSDWGKEFDGLSILSHLNS 94 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 + +GVAIL + + + + + + + N + Sbjct: 95 TSSGVAILFSKSFVPVSYQVDEVIKGRLLKVDAQFEKYSFIFICVYV----PVNALERMV 150 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + D +S + + + + ++ Sbjct: 151 FLDTLSNVLSNCDTDKVLFLGGDFNCTESMLDRNHVEPHMAS-------------QKRLI 197 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARID 242 Q ++ D R + + Y++ A + + R+D +L S I Sbjct: 198 QLIKTHEIVDVWRNFNGSQRQYTW----AHARDNLISLARLDRFYCFKHQFNLFRSCSIC 253 Query: 243 TKPRGWTKPSDH 254 SDH Sbjct: 254 P-----VSFSDH 260 >gi|94501712|ref|ZP_01308226.1| hypothetical protein RED65_04909 [Oceanobacter sp. RED65] gi|94426112|gb|EAT11106.1| hypothetical protein RED65_04909 [Oceanobacter sp. RED65] Length = 250 Score = 66.0 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 33/258 (12%), Positives = 71/258 (27%), Gaps = 12/258 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V +WN N + + ++ DI+ +QE ED + G+ Sbjct: 1 MRVVSWNCNG---ALRQKISAVESLEADILVIQE--CEDPALSTPLYRQWAGSYLWDGES 55 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 G+ + S+ + T T+ LR+ ++ + Sbjct: 56 KNRGIGVFSRNGHKIERIDWNSSFSVPGLKSSSKTLFWETKDLRLFLPFIVDNKYLFLAV 115 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND-ACFTLEVRQS 182 + S + + II + + + + + Sbjct: 116 WTKGRSEEVFSYIGQFWKYLQIHRTDLMQENTIILGDLNSNVRWDKPDRWWNHSDVISEL 175 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 + + +F+ + + ID+I S + T S I Sbjct: 176 DDMGFTSQYHRCFVEGQGLETIPTFFMHRNREKPYH----IDYIFTSSDITDKC-SLNIG 230 Query: 243 TKPRGWTKPSDHTPVIVS 260 + W SDH P+ + Sbjct: 231 SYE-DWISKSDHVPLTLD 247 >gi|326672949|ref|XP_003199762.1| PREDICTED: transposon TX1 uncharacterized 149 kDa protein-like, partial [Danio rerio] Length = 1298 Score = 66.0 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 36/252 (14%), Positives = 74/252 (29%), Gaps = 29/252 (11%) Query: 6 VATWNVNSIRARIH--NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 VA+ NVN R + IK+ D++C+QET ++ N + I + Sbjct: 7 VASLNVNGARDIRKRYQIYEIIKQKRIDVLCIQETHSDALNSSDWCKEFDGLSILSHLNS 66 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 + +GVAIL + + + + + + + N + Sbjct: 67 TSSGVAILFSKSFVPVSYQVDEVIKGRLLKVDAQFEKYSFIFICVYV----PVNALERMV 122 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + D +S + + + + ++ Sbjct: 123 FLDTLSNVLSNCDTDKVLFLGGDFNCTESMLDRNHVEPHMAS-------------QKRLI 169 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARID 242 Q ++ D R + + Y++ A + + R+D +L S I Sbjct: 170 QLIKTHEIVDVWRNFNGSQRQYTW----AHARDNLISLARLDRFYCFKHQFNLFRSCSIC 225 Query: 243 TKPRGWTKPSDH 254 SDH Sbjct: 226 P-----VSFSDH 232 >gi|167393392|ref|XP_001733520.1| DNA-(apurinic or apyrimidinic site) lyase [Entamoeba dispar SAW760] gi|165895311|gb|EDR23035.1| DNA-(apurinic or apyrimidinic site) lyase, putative [Entamoeba dispar SAW760] Length = 272 Score = 66.0 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 31/134 (23%), Positives = 59/134 (44%), Gaps = 8/134 (5%) Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL-QNM 189 + +R + L+ ++ +I+ GD N+ + D P+ A FT E R S + + + Sbjct: 144 WDKDMREHLKELQKKKNVIWCGDLNVALRWIDVAKPMTRLRCAGFTKEERASTSETLKEL 203 Query: 190 GFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGW 248 D + + Y+F+ Y SK+ G R+D+ +S + + +I R Sbjct: 204 NLVDTFQVKYPKKRDFYTFFSY--KDKSKSAGWRLDYFFISKDLVDSVT--QIYR--RKE 257 Query: 249 TKPSDHTPVIVSLD 262 SDH P+I+ + Sbjct: 258 ISASDHVPLIIHIK 271 >gi|150017193|ref|YP_001309447.1| endonuclease/exonuclease/phosphatase [Clostridium beijerinckii NCIMB 8052] gi|149903658|gb|ABR34491.1| Endonuclease/exonuclease/phosphatase [Clostridium beijerinckii NCIMB 8052] Length = 254 Score = 66.0 bits (159), Expect = 6e-09, Method: Composition-based stats. Identities = 41/270 (15%), Positives = 79/270 (29%), Gaps = 31/270 (11%) Query: 4 VTVATWNVNSIR------------ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51 + V T+N +R AR + I E DII +QE K N + + Sbjct: 1 MRVMTFN---LRRDVPIDFNDRWNARRSLIYNVINEYKCDIIGVQEIK---DNMLNDIKE 54 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 ++ + + + +L D + + Sbjct: 55 NI--EVYNIIGAPRGKKVSSERNSLLLSRNYLIEDYKTFWLSETPDKIGSRVWYSYLPRI 112 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 + + + + L ++ L++ L F D + +N Sbjct: 113 CTTAILQMDNGRRVRVCNTHLDNLLPKARMYGLKKILEFIEDEKLPVILMGDFNDRPNSK 172 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 E + S +KL + + + KG+ ID+I +S E Sbjct: 173 LIKSLKEGKISSKKLLPVQDVNMGLYNE---------STIGNFKRSGKGLHIDYIFVSEE 223 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + +A I PSDH P++ + Sbjct: 224 ID--VVNAEIIKYNVNGKYPSDHYPLMADI 251 >gi|122891324|emb|CAM13025.1| novel protein [Danio rerio] Length = 225 Score = 65.6 bits (158), Expect = 7e-09, Method: Composition-based stats. Identities = 36/243 (14%), Positives = 70/243 (28%), Gaps = 29/243 (11%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETK--TEDKNFPFETLQSLNYHIETC 60 + TWNVN ++ + N DI+ LQET DK + Sbjct: 5 TINFITWNVNGLKQNRDQKFQEL--QNADIVFLQETHIGVRDKQI-----EDYKKDWVVF 57 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 K + + + D D + ++ + Q + ++Y H + T Sbjct: 58 YTKYTSSSRGTAILVRKSLDFECISHDKDNRGAYVVLKCKLAGQKYTLVSVYNHHTDAKT 117 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE--NDACFTLE 178 + L+ GD+N I P + N Sbjct: 118 LDNLSRY------------LQKMTTGLLVIGGDFNTILNPFIDKKNNSNKIANKRNQKNL 165 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 + ++++ D R + ++F+ R+D+ + E + S Sbjct: 166 HLFVDKFMKSLQLADVWRRMNPVKQDFTFY---IRDRPV---SRLDYFFIPDECMWRVRS 219 Query: 239 ARI 241 I Sbjct: 220 CEI 222 >gi|326667829|ref|XP_003198680.1| PREDICTED: transposon TX1 uncharacterized 149 kDa protein-like [Danio rerio] Length = 1297 Score = 65.6 bits (158), Expect = 7e-09, Method: Composition-based stats. Identities = 36/252 (14%), Positives = 74/252 (29%), Gaps = 29/252 (11%) Query: 6 VATWNVNSIRARIH--NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 VA+ NVN R + IK+ D++C+QET ++ N + I + Sbjct: 6 VASLNVNGARDIRKRYQIYEIIKQKRIDVLCIQETHSDALNSSDWCKEFDGLSILSHLNS 65 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 + +GVAIL + + + + + + + N + Sbjct: 66 TSSGVAILFSKSFVPVSYQVDEVIKGRLLKVDAQFEKYSFIFICVYV----PVNALERMV 121 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + D +S + + + + ++ Sbjct: 122 FLDTLSNVLSNCDTDKVLFLGGDFNCTESMLDRNHVEPHMAS-------------QKRLI 168 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARID 242 Q ++ D R + + Y++ A + + R+D +L S I Sbjct: 169 QLIKTHEIVDVWRNFNGSQRQYTW----AHARDNLISLARLDRFYCFKHQFNLFRSCSIC 224 Query: 243 TKPRGWTKPSDH 254 SDH Sbjct: 225 P-----VSFSDH 231 >gi|237716422|ref|ZP_04546903.1| conserved hypothetical protein [Bacteroides sp. D1] gi|229444069|gb|EEO49860.1| conserved hypothetical protein [Bacteroides sp. D1] Length = 279 Score = 65.6 bits (158), Expect = 7e-09, Method: Composition-based stats. Identities = 34/266 (12%), Positives = 73/266 (27%), Gaps = 22/266 (8%) Query: 3 VVTVATWNVN--------SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 ++ +A++N+ S R++ L ++ N D+ +QE +T L + Sbjct: 24 IIRLASYNIRTKGDKGDKSWEVRLNALVDVVRRNKFDMFAIQEGRTSQLK-DMMILNEYS 82 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 Y + + + V + + + + Sbjct: 83 YIGRDRDGDNKGEHCAIYYKKDRFKVLKHGDFWYSETPDIPSYGWGARCRRICTWGYFKD 142 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 ++ R S + LE+ A Sbjct: 143 LRTGKKFYVFNSHTDHEATEARRQSSFMLLEQVRKIAKGR------PTFCTGDFNATPDE 196 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 +++ L + + Y++ + RID I ++P+ Sbjct: 197 EPIQLLLKDSLLLDSYKCTLTPPKGPSGSFYAY------DKTGKTAKRIDFIFVTPKIK- 249 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVS 260 +L ID + SDH PV+V Sbjct: 250 ILSYHTIDDDIKYNKYSSDHFPVMVE 275 >gi|147784395|emb|CAN72731.1| hypothetical protein VITISV_037853 [Vitis vinifera] Length = 976 Score = 65.6 bits (158), Expect = 8e-09, Method: Composition-based stats. Identities = 27/260 (10%), Positives = 70/260 (26%), Gaps = 36/260 (13%) Query: 4 VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + +WN+ + +R + +++ NPD++ QETK + Sbjct: 432 MKIISWNIRGLGSRKKRRVVKDFLRLQNPDVVMFQETK---------------REVCDRR 476 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 ++ G + ++ + + L P+ Sbjct: 477 FVGSVWSVKNKEWXAFPACRASGGILITWDSQKMSNEDVVIGFFSVSVKFLLDGCGPL-- 534 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 W+ + + + + + P C Sbjct: 535 --------WLSAVYGPNNPLTRKDLWVELLDFFGLT-FPSWCVGGDFNVIRRRSEKLGGS 585 Query: 182 SFQKLQNMGFTDAIRATHDTHHL-YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 F + + + + +++ ++ R+D + S E + Sbjct: 586 RFTRDFDGFIKECELHDPPLRNASFTW----SNMQESPVCKRLDWFLYSNEWELSFPQSL 641 Query: 241 IDTKPRGWTKPSDHTPVIVS 260 + PR SDH P+++ Sbjct: 642 QEVLPR---WTSDHWPIVLD 658 >gi|297172065|gb|ADI23048.1| metal-dependent hydrolase [uncultured Planctomycetales bacterium HF0770_03I01] Length = 278 Score = 65.6 bits (158), Expect = 8e-09, Method: Composition-based stats. Identities = 40/285 (14%), Positives = 68/285 (23%), Gaps = 38/285 (13%) Query: 4 VTVATWNV----------NSIRARIHNLAAWIKENNPDIICLQET-K-------TEDKNF 45 + ++N+ N ++ +A IKE D+ CLQE K + Sbjct: 1 MKFLSYNIQYGKGQKGKHN-----LYRVAETIKET--DVACLQELEKFWQRSGFVDQAQI 53 Query: 46 PFETLQSLN--YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 E L Y S Q + + + R Sbjct: 54 LSEFLPKFYSVYGPALDMDASLKNQYGQISNQRRQFGNMILSRYPIISTRNFPLPKQGTG 113 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 I + L + + + N P Sbjct: 114 PDPEHSIQRALLETVINIPGLGYTRVYST-HLSHRNPESRFPQIQLMMRRINQAPHEQGA 172 Query: 164 YNPI-----IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN 218 ++ E + + + + + DT Y W N Sbjct: 173 WSGEHTDAGWTEGEKPPMPQQFILMGDMNFKLDSKEYKEMVDTEDFYDAWKSNDKDRGTN 232 Query: 219 K-GIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 G IDH +S + ID SDH P+ + +D Sbjct: 233 VDGDSIDHCFVSKNLLPKIKRTYIDRNIT----ASDHWPLWMEMD 273 >gi|223936857|ref|ZP_03628766.1| Endonuclease/exonuclease/phosphatase [bacterium Ellin514] gi|223894426|gb|EEF60878.1| Endonuclease/exonuclease/phosphatase [bacterium Ellin514] Length = 273 Score = 65.2 bits (157), Expect = 9e-09, Method: Composition-based stats. Identities = 41/278 (14%), Positives = 86/278 (30%), Gaps = 56/278 (20%) Query: 2 SVVTVATWNVN---SI--RARIHNLAAWIKENNPDIICLQET-----KTEDKNFPFETLQ 51 + V T+N++ + + + +A IK+ DI+ LQE +T ++FP E + Sbjct: 34 NTFRVMTYNIHHGEGLDKQVDLQRIADLIKQEKADIVALQEVDRNTERTGKRDFPAEFTR 93 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 G + +T L + + + +++G+ Sbjct: 94 LTGMSCVFSNNWPVQGGEYGTAILTRFPITKREHSLLKMVGSKEQR--GLLQAHVKMGDR 151 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 + N + D+ + + E P+IF GD+N +P + Sbjct: 152 EVVVMNTHVDHRKTDEERLESIMEFATVIKKKAELPVIFCGDFNDVPGSPTYEQMSALLD 211 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP- 230 D+ + + + RID+I +S Sbjct: 212 DSWKLIGEGEGWTIPAEKPR-----------------------------RRIDYIWISKK 242 Query: 231 ----EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 + + ++ SDH P++V +P Sbjct: 243 GPIIPLRAWVPASE----------ASDHRPLVVEFQLP 270 >gi|86159101|ref|YP_465886.1| endonuclease/exonuclease/phosphatase [Anaeromyxobacter dehalogenans 2CP-C] gi|85775612|gb|ABC82449.1| Endonuclease/exonuclease/phosphatase [Anaeromyxobacter dehalogenans 2CP-C] Length = 282 Score = 65.2 bits (157), Expect = 9e-09, Method: Composition-based stats. Identities = 38/266 (14%), Positives = 72/266 (27%), Gaps = 34/266 (12%) Query: 5 TVATWNVNSIRAR-----IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 V TWNV+ +R +A + + D+ LQE P + Sbjct: 25 RVVTWNVHGLRGAGRRPDPERIARVLDDIGADVAGLQEVGAS---LPGADAHAA---EAL 78 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 NG + ++ + R P+ Sbjct: 79 ARLTGLNGAFGPTLQHARGFAYGNAILSRHPIDATRTYDLSVPGREPRGCLRADVVLGPM 138 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + + R R + L I + +P++ D + Sbjct: 139 RVHVFAAHLGLHWRERRRQAAALLS----------ADILRDAALSHPLVLVGDFNSPSDR 188 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + L+ A+ A S W +R+D + + + Sbjct: 189 SAVPRWLRRTLTDCAVAAGRPAATFPSAWPL----------LRLDRAYVDAAL--RVVAC 236 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPE 265 + PR + SDH P++V L++ E Sbjct: 237 EVVRTPRAR-RASDHLPLVVELELTE 261 >gi|320354767|ref|YP_004196106.1| endonuclease/exonuclease/phosphatase [Desulfobulbus propionicus DSM 2032] gi|320123269|gb|ADW18815.1| Endonuclease/exonuclease/phosphatase [Desulfobulbus propionicus DSM 2032] Length = 259 Score = 65.2 bits (157), Expect = 9e-09, Method: Composition-based stats. Identities = 44/279 (15%), Positives = 76/279 (27%), Gaps = 40/279 (14%) Query: 3 VVTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKN--FPFETLQ 51 ++ V ++N+ N R H I+ PD++ LQE + +D F L Sbjct: 1 MIRVMSFNIRYGLADDGDNHWNRRKHFALDRIRAFGPDLLGLQECR-DDGQAEFVRACLP 59 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ------- 104 ++ + + T L + + Sbjct: 60 EYHFWGVHRQGPGDTALEMAPLLFRRSAFTLLDSGCFWLSESPDDPGSMSWGSNYPRTVS 119 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 +R+ +T +D + S I R Q L+ + Sbjct: 120 WVRLACRGTGKTLLYANTHFDYEPSAIDGDARCLRQWLDRHCREMPCIVTGDFNADKRSD 179 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRID 224 + + +RQ + N A + ID Sbjct: 180 AYRLLTDGGNLLDALRQVAPQGGNESTFHAFGRPEEQAA-------------------ID 220 Query: 225 HIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 I++S + ARID G PSDH P+ LD Sbjct: 221 WILVSSHF--RVTEARIDRSCHGHLFPSDHYPITAVLDW 257 >gi|251779644|ref|ZP_04822564.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243083959|gb|EES49849.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 258 Score = 65.2 bits (157), Expect = 9e-09, Method: Composition-based stats. Identities = 39/274 (14%), Positives = 75/274 (27%), Gaps = 31/274 (11%) Query: 4 VTVATWNVNSIR------------ARIHNLAAWIKENNPDIICLQE-TKTEDKNFPFETL 50 + V T+N +R R + I + N DII QE TK + Sbjct: 1 MKVMTFN---LRCDFFLDFNNRWDERKKLVFDVINKYNCDIIGTQEATK--------KMF 49 Query: 51 QSLNYHIE-TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 + ++ +IE + + S+ I I + ++ + Sbjct: 50 KDISDNIETFNIIGNPRSKKLFSERNDILISKKHSIIENKTFWLHDNPEKYGRSRWYSMF 109 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 +I R + L + + Sbjct: 110 PRICTTAIVELENSKRIRICNSHLDFLLPQARAYELKKLSEFIKKEQEKEELPLIIMGDF 169 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 ++ L + N + ++ + + +K KG ID+I +S Sbjct: 170 NSNPNSKLIKEFINGDVFNKRLVAVQDKKKELYNKAT----MGNFKNKEKGSHIDYIFVS 225 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 E + I PSDH P++ + I Sbjct: 226 EEFE--IIDVEIVKYNVNGKYPSDHYPLMAEISI 257 >gi|315224062|ref|ZP_07865903.1| endonuclease/exonuclease/phosphatase [Capnocytophaga ochracea F0287] gi|314946033|gb|EFS98041.1| endonuclease/exonuclease/phosphatase [Capnocytophaga ochracea F0287] Length = 274 Score = 65.2 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 43/278 (15%), Positives = 87/278 (31%), Gaps = 42/278 (15%) Query: 4 VTVATWNV------NSIRA-----RIHNLAAWIKENNPDIICLQE-----TKTEDKNFPF 47 +TV T+N+ + + A R + + E NPDI +QE K ++ FP Sbjct: 20 LTVMTYNIRCEVPQDGVNAWTDGNRKEKVFTVLTEANPDIFGVQEALPHQLKFLEERFPT 79 Query: 48 ETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107 + + K + + + + L + R Sbjct: 80 YQREGVG----RDDGKEAGEHSAIFFKKGRFTLLDKGNFWLSQTPEVPSLGWDATCCN-R 134 Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167 I + T ++ + + S L L++ A +I Sbjct: 135 ICSWVKLKDKKTTFWVFNLHFDHEGKVAQVQSADLVLQKIKEIAKGGKVILMGD------ 188 Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI--RIDH 225 + QK+ + + + T+ T ++ +F +++ ++ + ID Sbjct: 189 ------FNLPTEHPAVQKIASQLYDTQLSPTNKTPNMGTF-----NAFKTDEPLKGHIDF 237 Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 I + + +I PSDH PV V L + Sbjct: 238 IFVQKSI--KVKQYKIIETRIDGLYPSDHLPVWVELQL 273 >gi|303313137|ref|XP_003066580.1| DNA lyase Apn2, putative [Coccidioides posadasii C735 delta SOWgp] gi|240106242|gb|EER24435.1| DNA lyase Apn2, putative [Coccidioides posadasii C735 delta SOWgp] Length = 588 Score = 65.2 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 28/84 (33%), Gaps = 12/84 (14%) Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR---- 246 + +Y+ W+ ++ N G RID+I+ S + + A I Sbjct: 227 WDMCRSFFPARSGMYTCWEQRINARPGNFGARIDYILCSLDMKDWMSIADIQEGLMVGNN 286 Query: 247 --------GWTKPSDHTPVIVSLD 262 ++ SDH PV Sbjct: 287 FQYALYQADSSQGSDHCPVYAIFK 310 Score = 36.3 bits (82), Expect = 4.6, Method: Composition-based stats. Identities = 11/57 (19%), Positives = 17/57 (29%), Gaps = 20/57 (35%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 + TWN DII LQE K + K+ + + + Sbjct: 2 TFRLTTWN--------------------DIIVLQELKIQRKDLRDDMVLVPGWDCFF 38 >gi|307105550|gb|EFN53799.1| hypothetical protein CHLNCDRAFT_136485 [Chlorella variabilis] Length = 1072 Score = 65.2 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 35/80 (43%), Gaps = 5/80 (6%) Query: 5 TVATWNVNSIRA----RIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 V ++NVN +RA R+ L+ ++ N DI+C+QETK + + + Sbjct: 11 RVLSFNVNGLRALLRDRLKLTLSQFLISLNADIVCMQETKLRRCDIDRDLAIVDGWDAFF 70 Query: 60 CGQKSYNGVAILSKYQPIEI 79 +S G + + Y + Sbjct: 71 SCSQSATGYSGTATYVRTAV 90 Score = 38.6 bits (88), Expect = 0.91, Method: Composition-based stats. Identities = 18/178 (10%), Positives = 37/178 (20%), Gaps = 1/178 (0%) Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 + +++ + + +L + + + L I Sbjct: 153 DHGAFVLFNIYGPAITKQEVAEDRMQYKLRFFSALELRWRDLLRQGRAVVAVGDLNICPT 212 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 L + + + G P Sbjct: 213 PLDYPVADLQFFRPSRPDRLWLRRLLHGSTTTGGSNSGGGGGDQSPPAAAAAAAGSNGNG 272 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIML 228 A S D RA H + ++ W + N G RID ++ Sbjct: 273 VAGIYGAGASSSNGGSGGILVDTFRAFHPTRQNAFTCWSTATSARVNNYGSRIDLVLT 330 >gi|221060144|ref|XP_002260717.1| exodeoxyribonuclease III [Plasmodium knowlesi strain H] gi|193810791|emb|CAQ42689.1| exodeoxyribonuclease III, putative [Plasmodium knowlesi strain H] Length = 948 Score = 65.2 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 28/142 (19%), Positives = 50/142 (35%), Gaps = 16/142 (11%) Query: 1 MSVVTVATWNVNS-------IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFE--TLQ 51 M + +A+WNVN I+ R +A ++K+ N DI+CLQETKT + E L Sbjct: 49 MESLQIASWNVNGWKKSCELIKQREVTVAHFLKKLNIDILCLQETKTNNPTIENESSLLD 108 Query: 52 SL--NYHIETCGQKSYNG-----VAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 + Y K G + + D F + + + Sbjct: 109 AYSDEYESYWTCCKRRGGGEKIQRGYSGLATYVGNKAKIICCCSDPFRNFFFSVDGFSEE 168 Query: 105 TLRIGNLYLPHGNPITSTKYDD 126 L + + + ++ + Sbjct: 169 DLLVSRCFPRDNSSVSFYAFPH 190 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 15/91 (16%), Positives = 34/91 (37%), Gaps = 10/91 (10%) Query: 187 QNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKP 245 D + + + ++ WD Y N+G RID+I + L + Sbjct: 649 CEDRMVDTFSFFYPSLNGKFTCWDTYKQHRVSNEGSRIDYIFVDFILYERLIRSH----- 703 Query: 246 RGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQ 276 S PV+++ ++ +++ D+ + Sbjct: 704 -SHLYAS---PVVMTEELRALLRREGDAKGE 730 >gi|73964662|ref|XP_849443.1| PREDICTED: similar to LINE-1 reverse transcriptase homolog [Canis familiaris] Length = 1384 Score = 65.2 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 55/264 (20%), Positives = 92/264 (34%), Gaps = 32/264 (12%) Query: 18 IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPI 77 + ++ WIK+ +P I CLQET K+ ++ + G + GVAIL + Sbjct: 133 MRRVSDWIKKQDPSICCLQETHFRQKDTYSLKIKGWRTIYHSNGPQKKAGVAILISDKLK 192 Query: 78 EIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF 137 D + +I +I + L I N+Y P+ Sbjct: 193 FTPK---TVVRDEEGHYIILKGSIQQEDLTILNIYAPNVGAAKYINQ-----------LL 238 Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA 197 + L+ + GD+N+ D + E+R L M FTD R Sbjct: 239 TKVKKYLDNNTLILGDFNLALSILDRSSKQNISK------EMRALNDTLDQMDFTDIYRT 292 Query: 198 THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257 H Y+F+ ++S RIDHI+ + I SDH Sbjct: 293 LHPNSTEYTFFSSAHGTFS-----RIDHILGHKSGLNRYQKIGIVPCI-----FSDHNA- 341 Query: 258 IVSLDIPEPRKKQQDSTSQNMKPI 281 L++ +K + S + ++ I Sbjct: 342 -SKLELNHNKKFGRTSNTWRLRTI 364 >gi|331009392|gb|EGH89448.1| exodeoxyribonuclease III [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 93 Score = 65.2 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 4/87 (4%) Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 E + + MG+ DA+R YS+W + N G R D+ +L+P + Sbjct: 7 PERAWMDEIVGTMGYVDALREVSREGDQYSWWPDNEQAEMLNLGWRFDYQILTPGLRRFV 66 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263 SAR+ +PR S H P+IV D Sbjct: 67 RSARLPRQPR----FSQHAPLIVDYDW 89 >gi|194216325|ref|XP_001504052.2| PREDICTED: similar to sphingomyelin phosphodiesterase 2, neutral membrane [Equus caballus] Length = 560 Score = 65.2 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 47/296 (15%), Positives = 90/296 (30%), Gaps = 35/296 (11%) Query: 4 VTVATWNVNSI------RA-RIHNLAAWIKENNPDIICLQETKT-EDKNFPFETLQS-LN 54 + V + N I RA R+ L ++ + D+ LQE + +D + + L Sbjct: 146 LRVFSLNCWGIPYLSKHRADRVKRLGDFLNMESFDLALLQEVWSEQDFQYLRQKLSPTYP 205 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN---- 110 +G+ + SK+ EI H+ + + F L + + Sbjct: 206 AAHYFRSGIIGSGLCVFSKHSIQEITQHIYTLNGYPYMIYHGDWFCGKAVGLLVLHLSGL 265 Query: 111 -------LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 N +++ +F + + ++ GD N+ P+ C Sbjct: 266 VLNAYVTHLHAEYNRQKDIYLAHRVAQAWELAQFIHHTSKKADVVLLCGDLNLHPKDLGC 325 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223 W LE R + + GIRI Sbjct: 326 RLLKEWTGLHDAYLETRDFKGSEEGCTMVPENCYV-----------SRQELEPFPLGIRI 374 Query: 224 DHIM---LSPE-ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTS 275 D+++ +S + I P T SDH ++ +L + +Q S + Sbjct: 375 DYVLYKAVSRFYISCKTLKTTIGRDPHSGTPLSDHEALMATLCVRHSPPQQDASPT 430 >gi|329889440|ref|ZP_08267783.1| endonuclease/Exonuclease/phosphatase family protein [Brevundimonas diminuta ATCC 11568] gi|328844741|gb|EGF94305.1| endonuclease/Exonuclease/phosphatase family protein [Brevundimonas diminuta ATCC 11568] Length = 251 Score = 65.2 bits (157), Expect = 1e-08, Method: Composition-based stats. Identities = 42/271 (15%), Positives = 90/271 (33%), Gaps = 29/271 (10%) Query: 5 TVATWNVN---SI--RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 + T+NV+ + + +H +A I E+ PD++CLQE + ++ ++ Sbjct: 3 RLLTYNVHRCVGVDRKLDVHRIADVIAEHEPDVVCLQE---------LDVGRARTGWVDQ 53 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 + + + +++ L GD + + L Sbjct: 54 ADAIAQRLAMSVQFHPAMKVEAELYGDAILTHRPERLVRAAALPTLPGLKGLEPRGALWS 113 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 ++ + L + L+ + D+ P N T Sbjct: 114 AVDFDGVVVNILNTHLGLVPREQRLQVAALVGRDWLGDPMCDGPTILTGDFNATSITRPY 173 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + ++L + ++ + +F + IRIDH +S E + A Sbjct: 174 QALTRRLDDAQRRLGLKPSIK-----TFPSSFPA-------IRIDHCFVSREI--RVTGA 219 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQ 270 R + P SDH P+I+ +I +P+ + Sbjct: 220 RTPSSPLARA-ASDHLPLIIDFEIDQPKGQP 249 >gi|255530733|ref|YP_003091105.1| endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM 2366] gi|255343717|gb|ACU03043.1| Endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM 2366] Length = 281 Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 39/267 (14%), Positives = 82/267 (30%), Gaps = 29/267 (10%) Query: 6 VATWNV------NSIRA---RIHNLAAWIKENNPDIICLQE-TKTEDKNFPFETLQSLNY 55 V ++N+ + A R + A ++ ++ DI+C+QE + L++ NY Sbjct: 30 VMSYNIRYNNDKDGENAWPNRKDEVKALVRFHDADILCVQEALALQADQL----LENTNY 85 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVT-HLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 + G+ S + G + + + + +RI Sbjct: 86 EMAGVGRTDGKREGEFSAVYFDKTRFVKKDGGTFWLSDTPEKPSKGWDAAIVRICTW--- 142 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 YD + ++ + A Q P++ D Sbjct: 143 ------VRLYDKWNKKEFMVFNTHYDHVGVQARIESAKLIKKKIQEIAPALPVVLTGDLN 196 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 T E + + + +F + ++ K K ID+I ++ Sbjct: 197 VTPETEAITTIKTFLTDSKEVSEEPAYGPEGTFNGFKFNAPLKEK---IDYIFINRGF-- 251 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261 + + T + PSDH P++ L Sbjct: 252 KVQKFAVLTDSKNQRYPSDHLPIMARL 278 >gi|123223478|emb|CAM21420.1| apurinic/apyrimidinic endonuclease 2 [Mus musculus] Length = 264 Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 12/51 (23%) Query: 5 TVATWNVNSIRARIHNLA------------AWIKENNPDIICLQETKTEDK 43 V +WN+N IR+ + LA + E + DI+CLQETK + Sbjct: 1 RVVSWNINGIRSPLQGLACQEPSSCPTALRRVLDELDADIVCLQETKVTSE 51 >gi|260223197|emb|CBA33518.1| hypothetical protein Csp_B19460 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 252 Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 28/262 (10%), Positives = 74/262 (28%), Gaps = 18/262 (6%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + TWN N + + + D+ +QE ED + + G Sbjct: 1 MKIVTWNCNG---ALRKKTEQLDTLDADVYVIQE--CEDPAQSTDVFREWAGSYLWVGTS 55 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 G+ + K +T G ++ + +T L++ + + + Sbjct: 56 KNKGLGVFPKKGNTVKLTEWFGTFKQAGVINSNSSTSWSTADLKLFLPFTLNEDFKFLGI 115 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP---HDCYNPIIWENDACFTLEVR 180 + + + I+ + ++ + +E Sbjct: 116 WTKAEGADVFSYIGQLWKYLQIHRAQLRQERTILLGDLNSNSIWDKPDRWWNHSDVVEEL 175 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH-SA 239 ++ ++ +F+ + + + ID++ +S + Sbjct: 176 RAIGLQSAYHRQTGEAQGQESTP--TFFLHRNVEKAYH----IDYVFVSDDLLDQARLDV 229 Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261 W SDH PV +++ Sbjct: 230 G---DSSAWLNSSDHMPVSLTI 248 >gi|300725857|ref|ZP_07059321.1| AP endonuclease domain protein [Prevotella bryantii B14] gi|299776845|gb|EFI73391.1| AP endonuclease domain protein [Prevotella bryantii B14] Length = 352 Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 34/263 (12%), Positives = 77/263 (29%), Gaps = 19/263 (7%) Query: 4 VTVATWNV---NSIRA--RIHNLAAWIKENNPDIICLQETKTED---KNFPFETLQSLNY 55 + V ++NV + + + +IK+ +PDI+CLQE ++ N + Y Sbjct: 90 IRVMSYNVFLFAGWNSPGTSNGILQYIKKQHPDILCLQEAGCQEIGQANIDSVLDKIYPY 149 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + S + L PI + + T ++ + +L Sbjct: 150 KQYSHHSSSNSETIALYSKFPIVDSVRINYPSKGNFSVAYRVTIDEDSVWIINNHLETTG 209 Query: 116 GNPITSTKYDDKISWIKRFL-RFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 + + + ++ +L + + + + Sbjct: 210 LSQDERKGFKLMMKGEMDHHVAKSTSKLIITRLGESSAKRAVEADAVSEFIEHHQHESII 269 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 + + + + Y+ + +RID+IM + + Sbjct: 270 LCGDFNDGPISYTHHTIVKKLIDCYIESGFGPGISYHKGGFF----VRIDNIMCTSDWEP 325 Query: 235 LLHSARIDTKPRGWTKPSDHTPV 257 +D K K SDH P+ Sbjct: 326 F--QCNVDNKI----KLSDHYPI 342 >gi|226311672|ref|YP_002771566.1| hypothetical protein BBR47_20850 [Brevibacillus brevis NBRC 100599] gi|226094620|dbj|BAH43062.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599] Length = 226 Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 36/278 (12%), Positives = 68/278 (24%), Gaps = 62/278 (22%) Query: 4 VTVATWNVNS-----IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 + V ++N++S R R++ + +K+ PDII LQE ++ Y Sbjct: 1 MRVVSYNIHSGRDLWWRNRLNEMTLTLKDLQPDIIGLQEVH-QNGK--------YGYQAS 51 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN- 117 + +A + + + Sbjct: 52 YIADQLQYHLAFSPSISIGDGYYGNTLLSKYALENVEAIVLPARKEQRTLLYASFQGFGR 111 Query: 118 ----PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 +T + + L + + PL+ GD+N + Sbjct: 112 TITLCVTHCSLNQVSRLAQLQLMSTLIQQHAKAPLLLMGDFNASNVSFTPHLMDCALVSG 171 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 +F+ R+D+I S Sbjct: 172 QEKKPTLPAFR------------------------------------RRLDYIFASHHW- 194 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271 I+ SDH PVI L + E + Sbjct: 195 ------NIEHYELLPVNWSDHVPVIADLRLTESPVHGE 226 >gi|255692701|ref|ZP_05416376.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides finegoldii DSM 17565] gi|260621535|gb|EEX44406.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides finegoldii DSM 17565] Length = 317 Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 48/302 (15%), Positives = 85/302 (28%), Gaps = 45/302 (14%) Query: 2 SVVTVATWNV-----------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETL 50 + TVA++N+ N R +A ++ ++ DI QE E L Sbjct: 27 TTFTVASYNLRNANGNDSLHGNGWGQRYPVIAKMVQYHDFDIFGTQECFLHQLKDMKEAL 86 Query: 51 QSLNY-HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 +Y + K + + + L + + Sbjct: 87 PGYDYIGVGRDDGKIQGEHSAIFYRTDKFDIIEKGDFWLSETPDVPSKGWDAVLPRICSW 146 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 + ++ + I + R S L E+ N+ +N Sbjct: 147 GHFKCKDTGFEFLFFNLHMDHIGKKARVESAYLVQEKMKELGKGKNLPAILTGDFNVDQT 206 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 +E + F A +F + +S++K RIDH+ +S Sbjct: 207 HQSYNAFVEKGVLCDSYEKCDFRYATNG--------TFNSFDPNSFTK---SRIDHVFVS 255 Query: 230 PEA--------------------TSLLHSA--RIDTKPRGWTKPSDHTPVIVSLDIPEPR 267 P + ID K PSDH PV V L+ E + Sbjct: 256 PAFHVKRYGILTDTYRSIVGNGEKENANDCPEEIDIKAYQARTPSDHFPVKVELEFDERQ 315 Query: 268 KK 269 +K Sbjct: 316 QK 317 >gi|167763762|ref|ZP_02435889.1| hypothetical protein BACSTE_02142 [Bacteroides stercoris ATCC 43183] gi|167697878|gb|EDS14457.1| hypothetical protein BACSTE_02142 [Bacteroides stercoris ATCC 43183] Length = 374 Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 41/271 (15%), Positives = 76/271 (28%), Gaps = 27/271 (9%) Query: 4 VTVATWNVNSIRARIHN-----LAAWIKENNPDIICLQET-------KTEDKNFPFETLQ 51 + + ++N+ + ++KE+N DI+CLQE K+ E L+ Sbjct: 110 IKLLSYNIMGFDGAYKKDGKNPILTYLKESNADILCLQEYASDESPRHLTQKDIERE-LK 168 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 Y ++ Y I++ D + +N T+ + N Sbjct: 169 DYPYRRINVVGSGNGYTNRIACYSKFPILSARVLDYASSYNGSVLYELKLNEDTITLINN 228 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 +L + K + L + PQ I Sbjct: 229 HLESNKLTKADKDIYEEILKAPETEKVKSGARLLLHKLAEASAIRAPQADTIAREIA--- 285 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG---IRIDHIML 228 + V + ++ S N+ RID+I++ Sbjct: 286 -SSRHPSVIVCGDFNDTPISYAHRVIAQNLDDAFTQ-SGRGLGISYNQNKFYFRIDNILI 343 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 S S + +D R SDH P+ Sbjct: 344 SKNLRSY--NCTVDRSIRE----SDHYPIWC 368 >gi|320170015|gb|EFW46914.1| hypothetical protein CAOG_04872 [Capsaspora owczarzaki ATCC 30864] Length = 680 Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 41/294 (13%), Positives = 80/294 (27%), Gaps = 38/294 (12%) Query: 4 VTVATWNV---NSI-----RARIHNLAAWIKENNPDIICLQETK--------TEDKNFPF 47 + V ++N+ N +R+ ++ + + E DI+ LQE + N Sbjct: 386 LKVVSFNIWNANGRGEAKYNSRMDHIGSILHEAQADIVALQEVRFDDSLVHSLPPANQAS 445 Query: 48 ETLQSL-NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 + L+ L Y SY + + I + P + Sbjct: 446 DLLRYLPGYQFAFQPAMSYPLDLTGRVEEGLAIYSRYPILNTGYLLLPRIPEDPHQRILF 505 Query: 107 RIGNLYLPHGNPITSTKY------DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP 160 G + ++ ++ + + P +F GD N P Sbjct: 506 HAEIDVPSVGVVDVVVSHFSLVDSARSVAALRVYDFLRKLARDSPRPQLFMGDLNATPLS 565 Query: 161 HDCYNPIIWE--NDACFTLEVRQS----FQKLQNMGFTDAIRATHDTHHLYSFWDYYADS 214 + + + D + + H + ++ Sbjct: 566 TAMQFLNGNVTLRNIRVGDMRDVWLALRPEPSYDPRTDDKLPHAPPSDHP--LYGMTFNT 623 Query: 215 WSKNKGIRIDHIML-----SPE-ATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + RID++ L SP I PR PSDH ++ D Sbjct: 624 HANFLSKRIDYMYLRQPAGSPSVLRPRSIDV-IGQHPRDGQMPSDHVGLVAEFD 676 >gi|227536411|ref|ZP_03966460.1| endonuclease/exonuclease/phosphatase family protein [Sphingobacterium spiritivorum ATCC 33300] gi|227243787|gb|EEI93802.1| endonuclease/exonuclease/phosphatase family protein [Sphingobacterium spiritivorum ATCC 33300] Length = 371 Score = 64.8 bits (156), Expect = 1e-08, Method: Composition-based stats. Identities = 36/288 (12%), Positives = 71/288 (24%), Gaps = 48/288 (16%) Query: 2 SVVTVATWNVNSIRARIHN--------LAAWIKENNPDIICLQE----TKTEDKNFPFET 49 S + V ++NV+ + + I PD+IC QE K + E Sbjct: 108 SSIRVLSFNVHLFKTAKKGEEKDFKREVLGIIDSIKPDVICFQEYYSKIKG-KHVYAKEL 166 Query: 50 LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 ++ Y S N + + G + + RI Sbjct: 167 RENFGYKYWYFEPASVNDYEAYGQAIFSKYPVIHSGTIVKNEYGIN-----------RII 215 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 + G S+ + + E A + Sbjct: 216 YADIEKGKKSMRIYNVHLRSFALQNEDKDFIQNPSGESNKTATRRVGRKLKQAFASRSEQ 275 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN-KGI------- 221 +E + + + + + +++ K G Sbjct: 276 AEALKEHIETAKIPYMVMGDFNDTPMSYSVNLIGK-----GMQNAFQKKGSGWGVTHYEM 330 Query: 222 ----RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 +ID+I S + I K SDH P+ + + + Sbjct: 331 LPIFQIDYIFTSNDF-------NILNYQIVKRKLSDHYPIWADVQLKD 371 >gi|256820874|ref|YP_003142153.1| Endonuclease/exonuclease/phosphatase [Capnocytophaga ochracea DSM 7271] gi|256582457|gb|ACU93592.1| Endonuclease/exonuclease/phosphatase [Capnocytophaga ochracea DSM 7271] Length = 274 Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 42/278 (15%), Positives = 86/278 (30%), Gaps = 42/278 (15%) Query: 4 VTVATWNV------NSIRA-----RIHNLAAWIKENNPDIICLQE-----TKTEDKNFPF 47 +TV T+N+ + + A R + + E NPDI +QE K ++ FP Sbjct: 20 LTVMTYNIRCEVPQDGVNAWTDGNRKEKVFTVLTEANPDIFGVQEALPHQLKFLEERFPT 79 Query: 48 ETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107 + + K + + + + L + R Sbjct: 80 YQREGVG----RDDGKGAGEHSAIFFKKGRFTLLDKGNFWLSQTPEVPSLGWDATCCN-R 134 Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167 I + ++ + + S L L++ A +I Sbjct: 135 ICSWVKLKDKKTIFWVFNLHFDHEGKVAQVQSADLVLQKIKEIAKGGKVILMGD------ 188 Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI--RIDH 225 + QK+ + + + T+ T ++ +F +++ ++ + ID Sbjct: 189 ------FNLPTEHPAVQKIASQLYDTQLSPTNKTPNMGTF-----NAFKTDEPLKGHIDF 237 Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 I + + +I PSDH PV V L + Sbjct: 238 IFVQKSI--KVKQYKIIETRIDGLYPSDHLPVWVELQL 273 >gi|262408023|ref|ZP_06084571.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|262354831|gb|EEZ03923.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] Length = 292 Score = 64.4 bits (155), Expect = 1e-08, Method: Composition-based stats. Identities = 34/266 (12%), Positives = 73/266 (27%), Gaps = 22/266 (8%) Query: 3 VVTVATWNVN--------SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 ++ +A++N+ S R++ L ++ N D+ +QE +T L + Sbjct: 37 IIRLASYNIRTKGDKGDKSWEVRLNALVDVVRRNKFDMFAIQEGRTSQLK-DMMILNEYS 95 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 Y + + + V + + + + Sbjct: 96 YIGRDRDGDNKGEHCAIYYKKDRFKVLKHGDFWYSETPDIPSYGWGARCRRICTWGYFKD 155 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 ++ R S + LE+ A Sbjct: 156 LRTGKKFYVFNSHTDHEATEARRQSSFMLLEQVRKIAKGR------PTFCTGDFNATPDE 209 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 +++ L + + Y++ + RID I ++P+ Sbjct: 210 EPIQLLLKDSLLLDSYKCTLTPPKGPSGSFYAY------DKTGKTAKRIDFIFVTPKIK- 262 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVS 260 +L ID + SDH PV+V Sbjct: 263 ILSYHTIDDDIKYNKYSSDHFPVMVE 288 >gi|237756598|ref|ZP_04585116.1| exodeoxyribonuclease III [Sulfurihydrogenibium yellowstonense SS-5] gi|237691244|gb|EEP60334.1| exodeoxyribonuclease III [Sulfurihydrogenibium yellowstonense SS-5] Length = 45 Score = 64.4 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 2/45 (4%) Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGW--TKPSDHTPVIVSLDI 263 +RID+I++S + +D PR KPSDH PVI+ L+I Sbjct: 1 MRIDYILVSKPLLQYIKDVEVDLWPRRRRSPKPSDHAPVILELEI 45 >gi|282879047|ref|ZP_06287807.1| endonuclease/exonuclease/phosphatase family protein [Prevotella buccalis ATCC 35310] gi|281298781|gb|EFA91190.1| endonuclease/exonuclease/phosphatase family protein [Prevotella buccalis ATCC 35310] Length = 362 Score = 64.4 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 42/269 (15%), Positives = 80/269 (29%), Gaps = 28/269 (10%) Query: 4 VTVATWNV-----NSIRARIHN----LAAWIKENNPDIICLQET----KTEDKNFPFETL 50 + V ++NV N + + +IKE + DI+CLQE+ K DK Sbjct: 101 IKVLSYNVWFFGGNG----FEHENNPVLNFIKEQDADIVCLQESDAWGKYSDKAKAL-MY 155 Query: 51 QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 YH + + + + I S++ I + + F + Sbjct: 156 SQYPYHASSHAKNKGDIMDIYSRHPIISQEDINYPSEGNHSTAFYLNIHGDTVIVINNHL 215 Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170 + + IK S + +++ + Y + Sbjct: 216 ESIGLSPEDKANFKGVVKGNIKGDSAQISTKTLIKKLGEASSIRAAQADAIAQYIAAHRD 275 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230 + +R + Y+ + +RIDH+M S Sbjct: 276 KSVILCGDFNDGPNSYARRTIAKQLRDCYVETANGPGISYHLGGFY----VRIDHMMCSK 331 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIV 259 + T + ++D K K SDH P+ Sbjct: 332 DWTPY--NCKVDNKI----KASDHYPIYC 354 >gi|294674945|ref|YP_003575561.1| endonuclease/exonuclease/phosphatase family protein [Prevotella ruminicola 23] gi|294472469|gb|ADE81858.1| endonuclease/exonuclease/phosphatase family protein [Prevotella ruminicola 23] Length = 364 Score = 64.4 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 44/287 (15%), Positives = 82/287 (28%), Gaps = 44/287 (15%) Query: 3 VVTVATWNVN----------SIRARIHNLAAWIKENNPDIICLQE--------TKTEDKN 44 + + ++NV + ++ E + DI+CLQE K Sbjct: 100 TIKLISYNVCQYGGNYKYEQG----FEKVHEYLTEQDADIVCLQEDVDTWRRYVK----Q 151 Query: 45 FPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLD----VQARFIEATFT 100 + + + I NGV I +KY I + + T Sbjct: 152 WYEKIYPYNDTTIFNPQDACINGVGIHTKYPIIRKERIPYESSGNGSVAYFLQVGNDTVL 211 Query: 101 INTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP 160 + L +L + + + + A + + Sbjct: 212 VINNHLEGTHLSNEDRDKYKQMISGKMKKYTAKAETLFLIEKLGKYAAKRAPEAEAVHDY 271 Query: 161 HDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG 220 + + F ++ G TD + T L Y + Sbjct: 272 IEAHRHYPIIVCGDFNDNPISYSRRTIAQGLTDCYQETGKGIGL----SYNQKGFF---- 323 Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPR 267 +RIDHI++S + ID+K SDH P+I +L + + Sbjct: 324 VRIDHILVSDHFEPY--NCHIDSKM----DASDHNPIICTLKMKSNQ 364 >gi|86740550|ref|YP_480950.1| endonuclease/exonuclease/phosphatase [Frankia sp. CcI3] gi|86567412|gb|ABD11221.1| Endonuclease/exonuclease/phosphatase [Frankia sp. CcI3] Length = 309 Score = 64.4 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 47/295 (15%), Positives = 84/295 (28%), Gaps = 36/295 (12%) Query: 1 MSVVTVATWNVNSI----------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETL 50 M+ V AT+N + R R + I+ + D++ +QE D L Sbjct: 1 MAQVRFATYNT--LDLFASDSPDERERYRRVVEVIRGLDADVVAVQEIIAPDVEVAAGRL 58 Query: 51 QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPG-----DDLDVQARFIEATFTINTQT 105 ++L N AI + Q + + + T Sbjct: 59 RTLADDAGMECTYEPNRPAIAAGRQRFHVGLLWRPGLSVVPGSFRTYGAADFWHALAKIT 118 Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI----IPQPH 161 + I + H + + + + R E P + D+N Sbjct: 119 IEIAGRQIQHASHHATPFGRHMRADQMERVVAVMTRPEGSPPGLIGADWNCVGADRRPDG 178 Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF------------WD 209 Y+P + + + + Q+ G LY+ W+ Sbjct: 179 SYYDPDPYADSDWYADLIYQTVWGYDERGRRRHRADREPGEVLYAGGLADAAVVLDRPWE 238 Query: 210 YYADSWSKNK--GIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 W N RID I ++ E L + + SDH PV V+ + Sbjct: 239 ATVGHWPGNTFGDRRIDAIRVTAEIAPALRAVEVTRTELAR-SASDHLPVTVTYE 292 >gi|293371502|ref|ZP_06617922.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CMC 3f] gi|292633539|gb|EFF52102.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CMC 3f] Length = 296 Score = 64.4 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 40/266 (15%), Positives = 79/266 (29%), Gaps = 22/266 (8%) Query: 3 VVTVATWNVN-----SIRA---RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 ++ +A++N+ +A R++ L ++ N D+ +QE +T L + Sbjct: 41 IIRLASYNIRTKGDKGDKAWEVRLNALVDVVRRNKFDMFAIQEGRTSQLK-DMMILNEYS 99 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 Y + + + V + + + + Sbjct: 100 YIGRDRDGDNKGEHCAIYYKKDRFKVLKHGDFWYSETPDIPSYGWGARCRRICTWGYFKD 159 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 + ++ R S + LE+ A + +A Sbjct: 160 LRSGKKFYVFNSHTDHEATEARRQSSFMLLEQVRKIAKGR---------PTFCTGDFNAT 210 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E Q K + + T SF+ Y + RID I ++P+ Sbjct: 211 PDEEPVQLLLKDSLLLDSYKCTLTPPKGPSGSFYAYDKTGKTAK---RIDFIFVTPKIK- 266 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVS 260 +L ID + SDH PV+V Sbjct: 267 ILSYHTIDDDIKYNKYSSDHFPVMVE 292 >gi|147801137|emb|CAN71042.1| hypothetical protein VITISV_019062 [Vitis vinifera] Length = 568 Score = 64.4 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 29/259 (11%), Positives = 69/259 (26%), Gaps = 30/259 (11%) Query: 4 VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + +WNV ++ + A I+ D+ CLQETK + Sbjct: 112 LRLLSWNVRGANDSSKRKVIKALIRSQRVDVFCLQETKIQA------------------- 152 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 GV L T++ + +G + Sbjct: 153 --MSEGVVRSLGTGRFLGWGALEASGSAGGILVCWDRRTLDVLDVEVGQFSISCRVRNVE 210 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + + + + EE G +++ +N + + + + Sbjct: 211 DGFCWMFTGVYXPFSRDERECLWEELGAIRGLWDVPWCLGGDFNITLLQGERSRQGRITG 270 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 + ++ M + ++ R+D +++ Sbjct: 271 AMRRFAQMVDELELTDLPLQGGRCTW----NGGRGSQSWARLDRFLVTQNWLDHFSGVV- 325 Query: 242 DTKPRGWTKPSDHTPVIVS 260 + R SDH P+++ Sbjct: 326 --QSRLPRPTSDHFPILLE 342 >gi|319900799|ref|YP_004160527.1| Endonuclease/exonuclease/phosphatase [Bacteroides helcogenes P 36-108] gi|319415830|gb|ADV42941.1| Endonuclease/exonuclease/phosphatase [Bacteroides helcogenes P 36-108] Length = 366 Score = 64.4 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 37/270 (13%), Positives = 76/270 (28%), Gaps = 27/270 (10%) Query: 5 TVATWNVNSIRARIHN-----LAAWIKENNPDIICLQET-------KTEDKNFPFETLQS 52 + ++N+ + ++KE+ DI+CLQE K+ E L+ Sbjct: 103 KLLSYNIMGFDGATKKDGGNPILTYLKESGADILCLQEYVTIESSRHLSQKDVSHE-LRD 161 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 YH ++ Y I++ + + I T+ + N + Sbjct: 162 YPYHRINIVGSGKGYTNQIACYSKYPILSARRLNYSSEYNGSVIYEVKIGEDTVTLINNH 221 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 L + K + +++ L+ + I E Sbjct: 222 LESNKLTKADKVVYEDMLK----SPEKDKVKSGIRLLIRKLAEASAIRAPQADTIANEIA 277 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG---IRIDHIMLS 229 + + + ++ S N+ RID+I+ S Sbjct: 278 SSAHPYIIVCGDFNDTPISYTHRTIAQNMDDAFTQ-SGRGLGISYNQNKFYFRIDNILTS 336 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 + + +D K SDH P+ Sbjct: 337 KNLKAY--NCTVDRSI----KESDHYPIWC 360 >gi|222150158|ref|YP_002551115.1| Metal-dependent exonuclease protein [Agrobacterium vitis S4] gi|221737140|gb|ACM38103.1| Metal-dependent exonuclease protein [Agrobacterium vitis S4] Length = 286 Score = 64.4 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 45/302 (14%), Positives = 76/302 (25%), Gaps = 59/302 (19%) Query: 4 VTVATWNV------NS----IRARIHNLAAWIKENNPDIICLQE-TKTEDK----NFPFE 48 + ++N+ + IR NL D+I LQE T+ + P E Sbjct: 1 MRFVSYNIQYGIGLDGKFDPIRIA-KNL------EGADVIALQEVTRGYPANGGADLP-E 52 Query: 49 TLQSLNYHIETCGQKSYNGVAILSKYQPIEIV-THLPGDDLDVQARFIEATFTINTQTLR 107 + + + A + + + G+ + + + + +T Sbjct: 53 IFANHFPEYHWVYGPACDLHASSALIKGRRVDKRFQFGNMVLSRWPILANRMLLLPRTRT 112 Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP- 166 L + E + F D I Sbjct: 113 FEKLNNQRAATEAVIDAPGGALRVYSVHLDHVAPDERIAQIRFLKDRAINFIQEGGAMTG 172 Query: 167 -IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK-------- 217 + E + R T Y Y + + Sbjct: 173 GQEFALPQPPLPEDFLLMGDFNMQPESPEYREMVGTIDAY----YGRTARADAPLDALAR 228 Query: 218 ----NKG-----------IR--IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 N G +R +D+ LS L +A +DT G SDH PV V Sbjct: 229 LGKLNAGSYSWEEVGKPDMRMHLDYCFLSGSLAHRLKAASVDTDAVG----SDHFPVWVE 284 Query: 261 LD 262 LD Sbjct: 285 LD 286 >gi|188588970|ref|YP_001920998.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum E3 str. Alaska E43] gi|188499251|gb|ACD52387.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum E3 str. Alaska E43] Length = 258 Score = 64.4 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 46/277 (16%), Positives = 82/277 (29%), Gaps = 37/277 (13%) Query: 4 VTVATWNVNSIR------------ARIHNLAAWIKENNPDIICLQETKTEDKNFPF---- 47 + V T+N +R R + + + N DII QE +K F Sbjct: 1 MKVMTFN---LRCDFFLDFNNRWDERKKLVFDVMNKYNCDIIGTQE--ATEKMFKDISDN 55 Query: 48 -ETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 ET + N + I K+ IE T D+ + R + T Sbjct: 56 IETFNIIGNPRSKKLFSERNDILISKKHSIIENKTFWLHDNPEKYGRSRWYSMFPRICTT 115 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 I L I ++ D + + + + + Sbjct: 116 AIVELKNSKRIRICNSHLDFLLPQARAYELKKLSEFIKK---------EQEKEDLPLIIM 166 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226 + ++ L + N D ++ + + +K KG ID+I Sbjct: 167 GDFNSNPNSKLIKDFINGDVLNKRLVAVQDKKKDLYNNAT----MGNFKNKEKGSHIDYI 222 Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +S E + I PSDH P++ ++I Sbjct: 223 FVSEEFE--IIDVEIVKYNVNGKYPSDHYPLMAEINI 257 >gi|298204331|gb|ADI61814.1| endonuclease-reverse transcriptase [Bombyx mori] Length = 1017 Score = 64.4 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 35/280 (12%), Positives = 83/280 (29%), Gaps = 19/280 (6%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPD----IICLQETKTEDKNFPFETLQSLNYHIET 59 + + TWNV + + + I+ + ET F + + Sbjct: 63 MKIGTWNVRGM--LQPGKREILDKEQAHYNLKILGITETHMRGSGF---YTTPKGHTVYF 117 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 G ++ + + + L + + + + + + + Sbjct: 118 SGPENESKHGVALSVVADINKSVLGYNPVSDRILTVRINTKPCRLNVVVVYAPTSTSSDA 177 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 ++ +++ R L L + + GD + D E Sbjct: 178 DIDEFYNQLDDTLRNLARRDITLVMGDLNAKVGDTSREHHLKDIVGTYGL-GIRNNRGER 236 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 F ++ + H LY++ ++N+ ID+I + S + SA Sbjct: 237 WLHFCAENSLTIMNTCFKNHPR-RLYTW--IMPGDRARNQ---IDYIAIDKRWRSCISSA 290 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMK 279 + G SDH ++ + + R K+ ++Q Sbjct: 291 KTYP---GADCGSDHKLLVADISLKLKRCKRTSLSTQRRL 327 >gi|300771464|ref|ZP_07081339.1| endonuclease/exonuclease/phosphatase family protein [Sphingobacterium spiritivorum ATCC 33861] gi|300761453|gb|EFK58274.1| endonuclease/exonuclease/phosphatase family protein [Sphingobacterium spiritivorum ATCC 33861] Length = 371 Score = 64.4 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 36/286 (12%), Positives = 70/286 (24%), Gaps = 48/286 (16%) Query: 2 SVVTVATWNVNSIRARIHN--------LAAWIKENNPDIICLQE----TKTEDKNFPFET 49 S + V ++NV+ + + I PD+IC QE K + E Sbjct: 108 SSIRVLSFNVHLFKTAKKGEEKDFKREVLGIIDSIKPDVICFQEYYSKIKG-KHVYAKEL 166 Query: 50 LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 ++ Y S N + + G + + RI Sbjct: 167 RENFGYKYWYFEPASVNDYEAYGQAIFSKYPVIHSGTIVKNEYGIN-----------RII 215 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 + G S+ + + E A + Sbjct: 216 YADIEKGKKSMRIYNVHLRSFALQNEDKDFIQNPSGESNKTATRRVGRKLKQAFASRSEQ 275 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN-KGI------- 221 +E + + + + + +++ K G Sbjct: 276 AEALKEHIETAKIPYMVMGDFNDTPMSYSVNLIGK-----GMQNAFQKKGSGWGVTHYEM 330 Query: 222 ----RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +ID+I S + I K SDH P+ + + Sbjct: 331 LPIFQIDYIFTSKDF-------NILNYQIVKRKLSDHYPIWADVQL 369 >gi|302549548|ref|ZP_07301890.1| endonuclease/exonuclease/phosphatase [Streptomyces viridochromogenes DSM 40736] gi|302467166|gb|EFL30259.1| endonuclease/exonuclease/phosphatase [Streptomyces viridochromogenes DSM 40736] Length = 301 Score = 64.4 bits (155), Expect = 2e-08, Method: Composition-based stats. Identities = 43/272 (15%), Positives = 85/272 (31%), Gaps = 39/272 (14%) Query: 4 VTVATWNVNSIR------------ARIHNLAAWIKENNPDIICLQE-----TKTEDKNFP 46 + V T+NV R R + ++ P +I QE + +K+ Sbjct: 44 LKVMTFNV---RFGTVVDRTPRWEVRRPVMRELLRRERPHVIGTQEGLYRQVRAIEKDL- 99 Query: 47 FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 +Y G+ + ++ + + L D + Sbjct: 100 -----GEHYDWIGTGRGGGSKDEFMAVFYDTRRLEPLEFDHFWLSGTPYAIASNTWGADW 154 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 ++ + + ++ + ++ + + D P Sbjct: 155 LRMVTWVRFADLAEGGREFYVLNTHLDSVSQYARERSVGLIGETIAGW-------DRSLP 207 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY-SFWDYYADSWSKNKGIRIDH 225 +I D + + + ++G DA A Y ++ Y + G RID Sbjct: 208 VIVTGDFNAGAHDNRVYDLMLDIGLVDAWDAAASRGPAYGTYHGYRG---PRPGGRRIDW 264 Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257 I+ +P T+ H A ++T R T PSDH PV Sbjct: 265 ILTTPGVTT--HWAGMNTFSRDGTYPSDHLPV 294 >gi|269926406|ref|YP_003323029.1| Endonuclease/exonuclease/phosphatase [Thermobaculum terrenum ATCC BAA-798] gi|269790066|gb|ACZ42207.1| Endonuclease/exonuclease/phosphatase [Thermobaculum terrenum ATCC BAA-798] Length = 271 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 40/274 (14%), Positives = 80/274 (29%), Gaps = 30/274 (10%) Query: 4 VTVATWNVNSI-----------RARIHNLAAWIKENNPDIICLQETKTEDKNFPF-ETLQ 51 + V ++NV RA ++ I NNPD+I QE ++ N + ++ Sbjct: 12 IRVMSFNVRGAVHKDGENAWDHRASLN--LRTILSNNPDLIGFQEV--QEGNLQKYQEMR 67 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 + +I ++ ++ G + + + +R+ Sbjct: 68 DYDKYIGLQYGAREPWEYAAIYWKKDKLERINSGG-FWLNEDCTQMGLGWDAACIRVATW 126 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 L + + + I P++ Sbjct: 127 CLFEHKASGLRFFHFNTHLDHEGRTARVEG--------TKKLLSQIESIVPNRFPVLITG 178 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRA-THDTHHLYSFWDYYADSWSKNKGIRIDHIML-S 229 D T E + + A + ++F + + G RID I++ Sbjct: 179 DFNCTPETEPYKLFMDAGFKDAYLEAGCMEDKEGFTF--HRFTGKPTHSG-RIDWILVRD 235 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 A + S +D PSDH P+I L + Sbjct: 236 GNARWYIRSFHLDRTGEPPIFPSDHFPLIADLSL 269 >gi|294643627|ref|ZP_06721429.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CC 2a] gi|294808046|ref|ZP_06766819.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides xylanisolvens SD CC 1b] gi|292641004|gb|EFF59220.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CC 2a] gi|294444687|gb|EFG13381.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides xylanisolvens SD CC 1b] Length = 296 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 34/266 (12%), Positives = 73/266 (27%), Gaps = 22/266 (8%) Query: 3 VVTVATWNVN--------SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 ++ +A++N+ S R++ L ++ N D+ +QE +T L + Sbjct: 41 IIRLASYNIRTKGDKGDKSWEVRLNALVDVVRRNKFDMFAIQEGRTSQLK-DMMILNEYS 99 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 Y + + + V + + + + Sbjct: 100 YIGRDRDGDNKGEHCAIYYKKDRFKVLKHGDFWYSETPDIPSYGWGARCRRICTWGYFKD 159 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 ++ R S + LE+ A Sbjct: 160 LRTGKKFYVFNSHTDHEATEARRQSSFMLLEQVRKIAKGR------PTFCTGDFNATPDE 213 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 +++ L + + Y++ + RID I ++P+ Sbjct: 214 EPIQLLLKDSLLLDSYKCTLTPPKGPSGSFYAY------DKTGKTAKRIDFIFVTPKIK- 266 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVS 260 +L ID + SDH PV+V Sbjct: 267 ILSYHTIDDDIKYNKYSSDHFPVMVE 292 >gi|271502601|ref|YP_003335627.1| endonuclease/exonuclease/phosphatase [Dickeya dadantii Ech586] gi|270346156|gb|ACZ78921.1| Endonuclease/exonuclease/phosphatase [Dickeya dadantii Ech586] Length = 287 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 51/300 (17%), Positives = 94/300 (31%), Gaps = 56/300 (18%) Query: 4 VTVATWNVN-SI----RARIHNLAAWIKENNPDIICLQET-----KTEDKNFPFETLQSL 53 + + ++N+ + R + +A ++ DIIC+QE ++ + P E L Sbjct: 1 MLIVSYNIQYGLGRDGRYDLARIADEVR--GADIICMQEVERFWQRSGMTDQPAELAALL 58 Query: 54 N-YHIETCGQKSYNGVAILSKYQPIEIVTHLPG----------------------DDLDV 90 YH + +++ + + + Sbjct: 59 GEYHWVYGANLDMDASTVVADGRVLNRRRQFGTLTLSRRPILSSRNFPLPKFGTLTQHSI 118 Query: 91 QARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIF 150 Q +E + +R+ N +L H T D + I P Sbjct: 119 QQGVLETVVDTDGGAIRVYNTHLSHLCAETRLPQVDAMLGIFARAPEEGGAWCGGHPDPT 178 Query: 151 AG----DYNIIPQPHDCYNPIIWENDACFT-----LEVRQSFQKLQNMGFTDAIRATHDT 201 AG ++PQ + D+ + +++ G DA A Sbjct: 179 AGWTEGRMPVMPQEMILMGDLNCLPDSDEYRHLVGPVSPHHGRLVRHRGLMDAWVAAGQL 238 Query: 202 HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + S N G RIDH +L+P + +DT+ +G SDH P+ V L Sbjct: 239 ES--------SGSTHPNVGGRIDHCLLTPSLGVTVRRCWVDTENQG----SDHHPLWVEL 286 >gi|149195689|ref|ZP_01872746.1| hypothetical protein LNTAR_17393 [Lentisphaera araneosa HTCC2155] gi|149141151|gb|EDM29547.1| hypothetical protein LNTAR_17393 [Lentisphaera araneosa HTCC2155] Length = 286 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 47/285 (16%), Positives = 79/285 (27%), Gaps = 44/285 (15%) Query: 4 VTVATWNV-----NSIRARIHNLAA---WIKENNPDIICLQETKTEDKNFPFETLQSLNY 55 V + T+NV + N+ W+K D I LQE K D N + ++ + Sbjct: 19 VKIITYNVLYGFNHG-----KNIQEGQAWLKAQQADFIALQEMKGFDANKFAQLAKTWGH 73 Query: 56 -HIETCGQKSYNGVAILSKYQPIEIVTHLPGDD----------------LDVQARFIEAT 98 H + +A S++ E+ G R Sbjct: 74 EHSYFYKRPHGMPLAFSSRFPISEVEELHKGVKRGFLKLKCRGIDFIVLHMTSQRLSARR 133 Query: 99 FTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLE-LEEPLIFAGDYNII 157 +N + I L G I ++ + L LE + + N Sbjct: 134 QELNYISPTISELLKKKGKVIVLGDFNSLSPRDMKHLSELDDLLEEMRNTPRKKPNLNDN 193 Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK 217 + Q + L F + + + Sbjct: 194 NFDIGIMTAFEDLGLVELCHQQLQGQKDL-QGSFPSTLLEKIPNKEI-----------QE 241 Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 RID I+ + L A I + K SDH P+I+ L+ Sbjct: 242 KYLRRIDFILSDAISAKNLSQAAIPKEG-DLEKISDHYPIIIELN 285 >gi|309366995|emb|CAP20464.2| hypothetical protein CBG_23668 [Caenorhabditis briggsae AF16] Length = 439 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 38/305 (12%), Positives = 84/305 (27%), Gaps = 32/305 (10%) Query: 4 VTVATWNVNSI----------RA-RIHNLAAWIKENNPDIICLQETKTEDK--NFPFETL 50 + + T N + R R+ + +++ DI+ LQE + + + Sbjct: 43 LRIVTLNAWCLPQPWPIGSTDRVHRLQKIGEYMRNETYDIVGLQELWSYNDFVRLSEQVK 102 Query: 51 QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR--- 107 + Y + +GV + S++ + +T + F L Sbjct: 103 DAYPYFHYFHSGFTGSGVCVFSRHPIVSTLTSRYSLNGFAHHIHRGDWFGGKVVGLTEVE 162 Query: 108 ---------IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP 158 + + + +F + +I GD N+ P Sbjct: 163 IDGDLRVNFYTTHLHAEYDRENDLYLPHRTAQSFELAQFVRHTARGADVVIVTGDLNMEP 222 Query: 159 QPHDCY---NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW 215 + + + EV + + I + + A Sbjct: 223 CDLGFRLILSHAKLFDAWRMSHEVETTDGDDGELLKFRGIAKGGTCDRPDNCYSKKAL-R 281 Query: 216 SKNKGIRIDHIML-SPEATSLLHSARI-DTKPRGWT-KPSDHTPVIVSLDIPEPRKKQQD 272 K+ RID+++ S L I + G SDH + I + + ++ Sbjct: 282 EKDDSKRIDYMLFKSGRCNVKLEECEITLNQIPGEDLNYSDHVGLRARFTIDDRFRHEKS 341 Query: 273 STSQN 277 + Sbjct: 342 INTWE 346 >gi|3248971|gb|AAD09945.1| unknown [Coxiella burnetii] Length = 50 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 4/49 (8%) Query: 214 SWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 +W KN G RID+ +++ + + + S RI R SDH P+I+ + Sbjct: 1 AWEKNVGWRIDYQVITSDLKNSVKSERIYKDKR----FSDHAPLIIDYE 45 >gi|317032475|ref|XP_001394977.2| DNA lyase [Aspergillus niger CBS 513.88] Length = 555 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 34/264 (12%), Positives = 63/264 (23%), Gaps = 26/264 (9%) Query: 4 VTVATWNVNSIRA-------RIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55 + + TWNVN IR R A DI+ QETK + K+ + + + Sbjct: 3 LRITTWNVNGIRNPFSYEPWRGKRTFDAMFDILEADIVVFQETKIQRKDLRDDMVLVPGW 62 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 S V I + ++ + R Sbjct: 63 DCYF----SLPRVKKGYSGVVIYTRNATCAPIRAEEGLSGMLCPPNSSVSFRELPENQQI 118 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 G T + + + G Y+ + + D Sbjct: 119 GGYPTIEQLSQLEVDAATLDSEGRCVILEFPAFVLLGIYSPANRDESRDSFRRSFIDLMD 178 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 + D + + ++ + +++ +D Sbjct: 179 ARIRNLVAMGKRVFVTGDLNISRGEIDAAHAGEAIRKGTLTEDD---LD-------MQEW 228 Query: 236 LHSARIDTKPRGWTKPSDHTPVIV 259 + I G SDH PV Sbjct: 229 FCDSNIQEGLMG----SDHCPVYA 248 >gi|332176908|gb|AEE12598.1| Endonuclease/exonuclease/phosphatase [Porphyromonas asaccharolytica DSM 20707] Length = 390 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 45/279 (16%), Positives = 75/279 (26%), Gaps = 37/279 (13%) Query: 4 VTVATWNVNSIRARIHNLA-----------AWIKENNPDIICLQETKTEDKN-------- 44 + V + N N A ++ E++ DIICLQE D + Sbjct: 129 IKVVSLNAN-----AFQFAELGAHDQHPATDYLAESDADIICLQEAWLSDNDSKYMSERS 183 Query: 45 FPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 Y + + + +LSKY + + A F Sbjct: 184 LHHTMQAYPYYSSAYAVKDHGSRLIVLSKYPILSTRPIDLHSKFNGGAVFTILVGEKKLV 243 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 + + + A + A I Q + Sbjct: 244 LYNLHLESFGFTKEEQKLYFQLAQEGNPKGFTQAVGGRFSPPFVRRAKQVEQIYQDVNYQ 303 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRID 224 F + G DAI T YS++ + G+RID Sbjct: 304 ESPYVLICGDFNDTPISYTHHRLSTGLHDAIATTG-RGTNYSYY------FKSLIGVRID 356 Query: 225 HIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 H++ S + A +D + SDH P+I + Sbjct: 357 HMLYSDHIEARA--AYVDRTA----EISDHKPIICYFKL 389 >gi|159469496|ref|XP_001692899.1| predicted protein [Chlamydomonas reinhardtii] gi|158277701|gb|EDP03468.1| predicted protein [Chlamydomonas reinhardtii] Length = 1192 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 15/74 (20%), Positives = 33/74 (44%), Gaps = 4/74 (5%) Query: 4 VTVATWNVNSIRARIHNL---AAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 + + +WN+N ++ I +++ N DI+CLQET+ D E + + Sbjct: 3 LRIVSWNINGLKRVITIFGSLERFLRVLNADIVCLQETQLRDG-LEPELAVAPGWDSYFG 61 Query: 61 GQKSYNGVAILSKY 74 + +G + + + Sbjct: 62 FTRCRSGYSGTATF 75 >gi|82915173|ref|XP_728992.1| glutamate dehydrogenase [Plasmodium yoelii yoelii str. 17XNL] gi|23485755|gb|EAA20557.1| glutamate dehydrogenase [Plasmodium yoelii yoelii] Length = 1203 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 32/78 (41%), Gaps = 11/78 (14%) Query: 1 MSVVTVATWNVNSIRA----RIHN---LAAWIKENNPDIICLQETKTEDKNFPFET---- 49 M + + +WNVN + N + +++++ + DI+CLQETKT D +E Sbjct: 1 MEKLHIVSWNVNGWKKSCEIIKKNGMSIESFLEKLDIDILCLQETKTNDDVIEYEPNVLN 60 Query: 50 LQSLNYHIETCGQKSYNG 67 S Y Sbjct: 61 AHSDKYETYWNCCIKKEN 78 Score = 43.2 bits (100), Expect = 0.039, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 28/69 (40%), Gaps = 11/69 (15%) Query: 198 THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL-LHSARIDTKPRGWTKPSDHTP 256 D + ++ WD Y + N+G RID+I + + + +P Sbjct: 485 YPDMNGKFTCWDTYKQNRLTNEGSRIDYIFIDNILFEMFIKKYNYLYD----------SP 534 Query: 257 VIVSLDIPE 265 +I++ ++ E Sbjct: 535 IILTKELQE 543 >gi|68235756|gb|AAY88216.1| endonuclease/reverse transcriptase [Rattus norvegicus] Length = 1275 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 76/251 (30%), Gaps = 32/251 (12%) Query: 6 VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + N+N + + I L WI+ +P CLQET DK+ + ++ + GQK Sbjct: 12 LISLNINGLNSPIKRHRLTNWIRNEDPAFCCLQETHLRDKDRHYLRVKGWKTTFQANGQK 71 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 GVAIL + + + I I + Sbjct: 72 KQAGVAILISNKINF--------------QLKVIKKDKEGHFIFIKGKIHQDELSILNIY 117 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + + + + I GD+N D +D EV Sbjct: 118 APNTRAPTYVKETLLKLKTHIAPHTIIVGDFNTPLSSMDRSWKQKLNSDVDRLREVMSQM 177 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 TD R + Y+F+ ++SK IDHI+ + I Sbjct: 178 ------DLTDIYRTFYPKAKGYTFFSAPHGTFSK-----IDHIIGQKTGLNRYRKIEIIP 226 Query: 244 KPRGWTKPSDH 254 SDH Sbjct: 227 CVL-----SDH 232 >gi|265767350|ref|ZP_06095016.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|263252655|gb|EEZ24167.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] Length = 365 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 40/282 (14%), Positives = 82/282 (29%), Gaps = 33/282 (11%) Query: 2 SVVTVATWNVNSI-RARIHN----LAAWIKENNPDIICLQE--------TKTEDKNFPFE 48 + + + ++N+ S + N + +IK +N DI+C+QE +K + Sbjct: 99 NSIKLLSYNIMSFGNMKKENGQNPILNYIKNSNADIVCMQEYAGSETAKIHLSNKEI-RQ 157 Query: 49 TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108 L+ +H K+ G + + + + + + L I Sbjct: 158 ALKDYPHHNIKQVGKTGAGSQLACYSKFPILSARMLDYRSNYNGSMVYEIKIGKDTVLLI 217 Query: 109 GNLY-----LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 N + D + + E I + I Q Sbjct: 218 NNHLESNKLTREDKVVYEDMLKDPKAGKVKSGVRQLVNKLAEASAIRSAQARTIAQEIAH 277 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223 F ++ + DA + + Y + + RI Sbjct: 278 SPYPSVIVCGDFNDSPISYAHRVISQDMDDAFTESGCGLGI----SYNQNKFY----FRI 329 Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 D+I++S +D K SDH P+ + +P+ Sbjct: 330 DNILVSKNL--KASGCTVDNSI----KDSDHYPIWCYITLPD 365 >gi|68235759|gb|AAY88218.1| endonuclease/reverse transcriptase [Rattus norvegicus] Length = 1275 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 76/251 (30%), Gaps = 32/251 (12%) Query: 6 VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + N+N + + I L WI+ +P CLQET DK+ + ++ + GQK Sbjct: 12 LISLNINGLNSPIKRHRLTNWIRNEDPAFCCLQETHLRDKDRHYLRVKGWKTIFQANGQK 71 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 GVAIL + + + I I + Sbjct: 72 KQAGVAILISNKINF--------------QLKVIKKDKEGHFIFIKGKIHQDELSILNIY 117 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + + + + I GD+N D +D EV Sbjct: 118 APNTRAPTYIKETLLKLKTHIAPHSIIVGDFNTPLSSMDRSWKQKLNSDVDRLREVMSQM 177 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 TD R + Y+F+ ++SK IDHI+ + I Sbjct: 178 ------DLTDIYRTFYPKAKGYTFFSAPHGTFSK-----IDHIIGQKTGLNRYRKIEIIP 226 Query: 244 KPRGWTKPSDH 254 SDH Sbjct: 227 CVL-----SDH 232 >gi|330466603|ref|YP_004404346.1| endonuclease/exonuclease/phosphatase [Verrucosispora maris AB-18-032] gi|328809574|gb|AEB43746.1| endonuclease/exonuclease/phosphatase [Verrucosispora maris AB-18-032] Length = 257 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 78/259 (30%), Gaps = 21/259 (8%) Query: 3 VVTVATWNV-NSIRA-----RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS-LNY 55 ++ V TWNV N R R L I + PD++ LQE + + L Sbjct: 1 MLRVLTWNVRNGGRDSGGPDRRDALLRVIAQTRPDVLALQELR----GLDVTAFAARLGL 56 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 G VA+L + + A+ + T+ + Y Sbjct: 57 RPYVAGSWFGQPVAVLVRPTWPVLAAAPVRRPFHHGAQRVTIGTDAGPLTVLSTHFYPYS 116 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 G + + A +L +A I + + Y Sbjct: 117 GRRRLIEAGWAAAALRRARGGLALLAGDLNTLDPYAEHAEQIARLPETYRRRH-LRRDGR 175 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 T + R + L A Y A + + +R+D+++ +P + Sbjct: 176 TPDTRAVARLLAAGLVDLGAAAGPTVPTGY------AGAEFSD--MRLDYLLATPALATH 227 Query: 236 LHSARIDTKPRGWTKPSDH 254 L + + P+ + SDH Sbjct: 228 LLTVDVLRTPQ-THQASDH 245 >gi|257093975|ref|YP_003167616.1| Endonuclease/exonuclease/phosphatase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046499|gb|ACV35687.1| Endonuclease/exonuclease/phosphatase [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 294 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 43/283 (15%), Positives = 84/283 (29%), Gaps = 27/283 (9%) Query: 4 VTVATWNVN----SIRAR--IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57 + VAT+N++ IR R IH++ ++ + DI+ LQE +D+N Y Sbjct: 3 LRVATYNIHKGVTGIRGRPRIHDVRLALEAIDADIVFLQEV--QDRN--ERLAHHPGYPF 58 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPG-------DDLDVQARFIEATFTINTQTLRIGN 110 T +G Y + H + A + + + L Sbjct: 59 GTQLDFLASGAYAHRAYGMNAVYPHGHHGNAILSRHRITESANHDISDHALEKRGLLHAV 118 Query: 111 LYLPHGN----PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 L G + R F + ++ E P Sbjct: 119 TRLGRGRGREVHLICVHLGLIKRSRVRQATFLADFVQREVPASAPLIIAGDFNDWQQRVD 178 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226 + + + G D + + S S++ + +D I Sbjct: 179 GLLRDRLGVQEVAVAATSPPPEGGLLDRLLSWRPASDAQSGVSRTFPSFA--PWLTLDRI 236 Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKK 269 + + ++ + W + SDH P+I L++ R + Sbjct: 237 YV-RGF--RVLDMQV-PQGLAWARCSDHAPLIAELELDAVRPR 275 >gi|225453658|ref|XP_002268290.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 232 Score = 64.0 bits (154), Expect = 2e-08, Method: Composition-based stats. Identities = 31/262 (11%), Positives = 69/262 (26%), Gaps = 33/262 (12%) Query: 1 MSVVTVATWNVNSIR-ARIHNLAA-WIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 M+ + + +WNV + +R + I++ D+ C+QETK + Sbjct: 1 MN-LKLLSWNVRGVNESRKRKVIKSVIRKQKVDLFCIQETKIQ----------------- 42 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 V L + +G L Sbjct: 43 ----IMTERVVRSLGTGRFLEWKVLNACGSAGGILICWDKRVLELLEWEVGQFSLSCRFR 98 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + + + EE G + +N + + + Sbjct: 99 TMENGVIWAFTGVYGPFTRLEREWLWEEVGAIRGIWEGPWCLGGDFNITLAQGERNRQGR 158 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 + + ++ + + +++ + R+D ++SP Sbjct: 159 ITSAMRRFAEVVDDLGLVDLQMQGGAFTW----TGGLNNMSRARLDIFLVSPCWLDQFSR 214 Query: 239 ARIDTKPRGWTKP-SDHTPVIV 259 R +P SDH PV++ Sbjct: 215 VS----QRRLPRPISDHFPVLL 232 >gi|296123488|ref|YP_003631266.1| endonuclease/exonuclease/phosphatase [Planctomyces limnophilus DSM 3776] gi|296015828|gb|ADG69067.1| Endonuclease/exonuclease/phosphatase [Planctomyces limnophilus DSM 3776] Length = 253 Score = 63.7 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 34/277 (12%), Positives = 68/277 (24%), Gaps = 62/277 (22%) Query: 4 VTVATWNVN-SI-----RARIHNLAAWIKENNPDIICLQET-------------KTEDKN 44 + + ++N++ I R R+ + ++ PD+ICLQE K + Sbjct: 1 MRIVSFNIHKGIGGRDRRYRLERIIEALRALEPDVICLQEVDHHVARSRYDHQAKLISEA 60 Query: 45 FPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 L +Y + ++ G I S+Y + Sbjct: 61 L---GLVHAHYQLNVRLKEGGYGNLIASRYPLASVHAISLTRRHYKPRGAQLVVVQTPLG 117 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 L + + +L + + + + + P Sbjct: 118 RLHLIHWHLGLRETERHWQVRRMFEHQHFREHRQLPAIAIGDTNDWRNTLANGPF----- 172 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRID 224 V Q + A +D Sbjct: 173 -------------AVHGWKQISSPPSRFRSFPAWLPLGA-------------------LD 200 Query: 225 HIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + ++ + S I R SDH P++V L Sbjct: 201 KVFVNSGVA--IESCHIAKS-RLLRDASDHLPLVVDL 234 >gi|293376548|ref|ZP_06622776.1| endonuclease/exonuclease/phosphatase family protein [Turicibacter sanguinis PC909] gi|325839350|ref|ZP_08166789.1| endonuclease/exonuclease/phosphatase family protein [Turicibacter sp. HGF1] gi|292644774|gb|EFF62856.1| endonuclease/exonuclease/phosphatase family protein [Turicibacter sanguinis PC909] gi|325490470|gb|EGC92786.1| endonuclease/exonuclease/phosphatase family protein [Turicibacter sp. HGF1] Length = 260 Score = 63.7 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 40/278 (14%), Positives = 72/278 (25%), Gaps = 47/278 (16%) Query: 4 VTVATWNVNSIRA------------RIHNLAAWIKENNPDIICLQET-----KTEDKNFP 46 + V T+N +R+ R H + IK+ N DII LQE K ++ Sbjct: 1 MKVMTFN---LRSDSIFDGKNRWHKRNHIVFDVIKKYNCDIIGLQEVTNKMYKDIEEQL- 56 Query: 47 FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 + ++ I I + + + ++ Sbjct: 57 ----------SDYYIIGQPRCKRFFVEHNNILISKRHEILEEETFWLSNQPKKVGSSIWY 106 Query: 107 RIGNLYLPHGNPITS-----TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161 + Y+ + R + E I Sbjct: 107 SVFPRICTTAKVRLDSGELVRIYNTHLDVYLSPARGYGLKKISEYIERQQEIDQIPVVLM 166 Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI 221 +N E S ++ + D T + KG+ Sbjct: 167 GDFNATPNHRIIKTFTEGELSHKRFVAVQEYDKSIYNKPTMGRF---------KDSEKGM 217 Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 +D+I +S E + A I PSDH P++ Sbjct: 218 HLDYIFVSEECA--VLHAEIIKDNVNGQYPSDHYPLLA 253 >gi|255530372|ref|YP_003090744.1| endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM 2366] gi|255343356|gb|ACU02682.1| Endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM 2366] Length = 303 Score = 63.7 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 39/252 (15%), Positives = 71/252 (28%), Gaps = 14/252 (5%) Query: 13 SIRARIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYHIETCGQKSYNGVAIL 71 R AA + + PDIIC+QE + ++++ Y + Sbjct: 59 GWNGRKEICAAIMLQQKPDIICMQEVLRNQNEDLKKALK---GYFSFGFEGPEMDAFTTG 115 Query: 72 SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWI 131 I + + ++ L G+L + K Sbjct: 116 YH----GIAKNPIFFSEKRYELLSAGGYWLSETPLMAGSLSWDSARARNANWVRLKDRQS 171 Query: 132 KRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE---NDACFTLEVRQSFQKLQN 188 + R + L+ + ++ Y + D + E + + Sbjct: 172 GKDFRVVNLHLDHKSQPAREKQMEMVLADAAQYPRDYPQLLAGDFNASAENKVYELVISA 231 Query: 189 MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGW 248 + Y+ + +++SK KG +ID I E T SA I Sbjct: 232 KWKDIYTTLHGEAEPGYTVHQFQGENYSK-KGKKIDFIFCKGEVT--AQSAGILKDNVKG 288 Query: 249 TKPSDHTPVIVS 260 PSDH V Sbjct: 289 KYPSDHYFVSAE 300 >gi|294931921|ref|XP_002780053.1| ap endonuclease, putative [Perkinsus marinus ATCC 50983] gi|239889897|gb|EER11848.1| ap endonuclease, putative [Perkinsus marinus ATCC 50983] Length = 101 Score = 63.7 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 41/106 (38%), Gaps = 9/106 (8%) Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDH 225 + E + + GFTD H +S+W A +N+G+R+D+ Sbjct: 1 MPIWFTGTTNEERESFREHYTSKGFTDTFAHMHPHATGCFSYWSVRARDKPRNRGLRLDY 60 Query: 226 IMLSPEA-TSLLHSARIDTK--PRGWTKPSDHTPVIVSLDIPEPRK 268 ++ +P + A I P G H PV V+ + P R+ Sbjct: 61 VISAPGFPIDRIEDAFILEDFAPHGN-----HCPVGVTFERPLKRQ 101 >gi|298373308|ref|ZP_06983297.1| AP endonuclease domain-containing protein [Bacteroidetes oral taxon 274 str. F0058] gi|298274360|gb|EFI15912.1| AP endonuclease domain-containing protein [Bacteroidetes oral taxon 274 str. F0058] Length = 370 Score = 63.7 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 38/261 (14%), Positives = 76/261 (29%), Gaps = 17/261 (6%) Query: 4 VTVATWNVNSIRARIH--NLAAWIKENNPDIICLQE----TKTEDKNFPFETLQSLNYHI 57 + + ++N++S+ + +I + DI+C QE ++ Y Sbjct: 112 IKLLSYNISSLGSVRDFDQFMGFIDSIDADIVCFQEFGYYVH-HKDRLKKAMEKNYPYSH 170 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 +S N ++ + ++ + I + I T+R+ N +L Sbjct: 171 IWYKNQSRNYSWGVATFSKHPVINKKKIEYSSRYNVSIYSDIDIGDDTIRVINNHLESNK 230 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + + + L + + + + Sbjct: 231 FTLADIRQYR---TLDNDLSGNNILNTSSLFSRKLGEAYKIRATQAAMVRATIDSSPYKS 287 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 V F + I+ + W Y S + IDHI++ L Sbjct: 288 VVCGDFNDVTESYAYSKIKDGLTDLFTATAWGYRYSFRSNYMLVGIDHILIDHRLIPL-- 345 Query: 238 SARIDTKPRGWTKPSDHTPVI 258 S ID K SDH P+I Sbjct: 346 SLTIDRK-----NYSDHYPLI 361 >gi|225443954|ref|XP_002272288.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1551 Score = 63.7 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 35/261 (13%), Positives = 76/261 (29%), Gaps = 32/261 (12%) Query: 4 VTV--ATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 + TWNV + A IK++ D++CLQETK ++ + SL Sbjct: 1 MKFRMLTWNVRGANNCDKRKVIKALIKKHKVDLVCLQETKIQE--MSKGIICSLG----V 54 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 + V I + ++ G Sbjct: 55 GRYLDWGAVDSRGAAGGIVV--------FWDNRVLELVDIHKGGCSISCIFKNSEDG--- 103 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + + + + + EE G +N +N I+ + + Sbjct: 104 ----FMWMFTGVYGPILRRERESFWEELGAIKGLWNGPWCAAGDFNAILSPEERNRGGRL 159 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + ++ + ++ +++ + + R+D +++ + Sbjct: 160 NSNMRRFVEIIEDLELKDVPLVGGPFTW----SGGVNNQSFSRLDRFLINEGWDNHFGDV 215 Query: 240 RIDTKPRGWTKPSDHTPVIVS 260 R PR SDH PV++ Sbjct: 216 RQCVLPR---PVSDHFPVLLD 233 >gi|255036167|ref|YP_003086788.1| Endonuclease/exonuclease/phosphatase [Dyadobacter fermentans DSM 18053] gi|254948923|gb|ACT93623.1| Endonuclease/exonuclease/phosphatase [Dyadobacter fermentans DSM 18053] Length = 280 Score = 63.7 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 38/278 (13%), Positives = 76/278 (27%), Gaps = 38/278 (13%) Query: 2 SVVTVATWNV------NSIRA---RIHNLAAWIKENNPDIICLQETKTEDKNF----PFE 48 + + VA++N+ + + A R N+ I+ + DI +QE Sbjct: 24 ATINVASYNLRYNTPNDGVNAWPNRKENVKGLIRFHEFDIFGVQE--ALVGQLKDVAELP 81 Query: 49 TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR---FIEATFTINTQT 105 + + + K + + + + Sbjct: 82 EFAYYGKGRDDGKEGGEHSAIFYKKDRFKLLKSGDFWLSETPDKPGLGWDATCCNRICSW 141 Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165 + +L + +D + +R + E Sbjct: 142 AQFEDLKTKKKFFFFNVHFDHQGVEARRQSGHLMVKKIKEIAGNSTAIL----------- 190 Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225 D T E Q + T + +F + D+ K RID+ Sbjct: 191 ----TGDFNSTPETEQIKTLGAALNDTHDVTKQAPYGPEGTFNSFKFDAPMK---ARIDY 243 Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 I +S + + T + PSDH PV+V ++I Sbjct: 244 IFVSKNVD--VLKYGVLTDSKEQRYPSDHQPVLVKIEI 279 >gi|293355456|ref|XP_002728697.1| PREDICTED: LRRG00135-like [Rattus norvegicus] Length = 1275 Score = 63.7 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 76/251 (30%), Gaps = 32/251 (12%) Query: 6 VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + N+N + + I L WI+ +P CLQET DK+ + ++ + GQK Sbjct: 12 LISLNINGLNSPIKRHRLTNWIRNEDPAFCCLQETHLRDKDRHYLRVKGWKTTFQANGQK 71 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 GVAIL + + + I I + Sbjct: 72 KQAGVAILISNKINF--------------QLKVIKKDKEGHFIFIKGKINQDELSILNIY 117 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + + + + I GD+N D +D EV Sbjct: 118 APNTRAPTYVKETLLKLKTHIAPHTIIVGDFNTPLSSMDRSWKQKLNSDVDRLREVMSQM 177 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 TD R + Y+F+ ++SK IDHI+ + I Sbjct: 178 ------DLTDIYRTFYPKAKGYTFFSAPHGTFSK-----IDHIIGQKTGLNRYRKIEIIP 226 Query: 244 KPRGWTKPSDH 254 SDH Sbjct: 227 CVL-----SDH 232 >gi|313886230|ref|ZP_07819959.1| endonuclease/exonuclease/phosphatase family protein [Porphyromonas asaccharolytica PR426713P-I] gi|312924301|gb|EFR35081.1| endonuclease/exonuclease/phosphatase family protein [Porphyromonas asaccharolytica PR426713P-I] Length = 390 Score = 63.7 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 45/279 (16%), Positives = 75/279 (26%), Gaps = 37/279 (13%) Query: 4 VTVATWNVNSIRARIHNLA-----------AWIKENNPDIICLQETKTEDKN-------- 44 + V + N N A ++ E++ DIICLQE D + Sbjct: 129 IKVVSLNAN-----AFQFAELGAHDQHPATDYLAESDADIICLQEAWLSDNDSKYMSERS 183 Query: 45 FPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 Y + + + +LSKY + + A F Sbjct: 184 LHHTMQAYPYYSSAYAVKDHGSRLIVLSKYPILSTRPIDLHSKFNGGAVFTILVGEKKLV 243 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 + + + A + A I Q + Sbjct: 244 LYNLHLESFGFTKEEQKLYFQLAQEGNPKGFTQAVGGRFSPPFVRRAKQVEQIYQDVNYQ 303 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRID 224 F + G DAI T YS++ + G+RID Sbjct: 304 ESPYVLICGDFNDTPISYTHHRLSTGLHDAIATTG-RGVNYSYY------FKSLIGVRID 356 Query: 225 HIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 H++ S + A +D + SDH P+I + Sbjct: 357 HMLYSDHIEARA--AYVDRTA----EISDHKPIICYFKL 389 >gi|225435512|ref|XP_002282995.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1013 Score = 63.7 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 34/259 (13%), Positives = 78/259 (30%), Gaps = 30/259 (11%) Query: 4 VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + +WNV + A IK+N D++CLQETK ++ ++S+ Sbjct: 3 IRILSWNVKGANNCDKRKVIKALIKKNKVDLVCLQETKIQE--MTRGLIRSIG----VGR 56 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 + V I + ++ + E + + + + G + G + Sbjct: 57 FLDWGTVDSRGSAGGIVVFWDNRVLEMIELEK-GECSISCHFKNCEDGFTWTFTGVYGPT 115 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + + + W + F + + A E++ Sbjct: 116 KRRERESLWNELGAIHGLWNGPWCVAGDFNAILSPEERSRGGSFNSDMRRFADVIEELQL 175 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 L +++ + + R+D +++ +R Sbjct: 176 KDLPLF--------------GGPFTW----SGGANNQTLSRLDRFLVNEGWDCRFSHSRQ 217 Query: 242 DTKPRGWTKPSDHTPVIVS 260 PR SDH P+++ Sbjct: 218 SVLPR---PVSDHFPILLE 233 >gi|325106148|ref|YP_004275802.1| Endonuclease/exonuclease/phosphatase [Pedobacter saltans DSM 12145] gi|324974996|gb|ADY53980.1| Endonuclease/exonuclease/phosphatase [Pedobacter saltans DSM 12145] Length = 372 Score = 63.7 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 40/274 (14%), Positives = 77/274 (28%), Gaps = 25/274 (9%) Query: 2 SVVTVATWNVNSIRA--------RIHNLAAWIKENNPDIICLQE--T----KTEDKNFPF 47 S V + T+NV+ + +N+ I E PD+I +QE T K + +N Sbjct: 104 SSVRLMTYNVHHFKQFGSEVDSNARNNILDLINEEQPDVIAIQEFLTRKKGKLKSENNIR 163 Query: 48 ETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGD-DLDVQARFIEATFTINTQTL 106 + L + +Y+ + Y + I + + + D + N + Sbjct: 164 KILGTEDYYFYSTSGNDYESMGIAIFSKLPIVNKGKLTELDPKGSNNGLWIDVKKNNKVF 223 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 RI ++L Y K + + + + Q + Sbjct: 224 RIYTIHLASIAFAPVDYYYFKRISNMKTEDEDIKHGRRILSRLKSAFVRRAKQVEILKSY 283 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226 + ++ Y + + ID+I Sbjct: 284 TDSCKTPFVIMGDFNDTPVSYSVNQISKDLKNSFIEKGVGIGRTYNGDFPNFQ---IDYI 340 Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 + + + I T SDH PV V Sbjct: 341 LTTKDF-------DIHTYKIIKKAYSDHYPVRVD 367 >gi|260827819|ref|XP_002608861.1| hypothetical protein BRAFLDRAFT_102054 [Branchiostoma floridae] gi|229294215|gb|EEN64871.1| hypothetical protein BRAFLDRAFT_102054 [Branchiostoma floridae] Length = 537 Score = 63.7 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 44/285 (15%), Positives = 84/285 (29%), Gaps = 42/285 (14%) Query: 4 VTVATWNV---NS-----IRA---RIHNLAAWIKENNPDIICLQETK--------TEDKN 44 + +A++NV N ++A R +L + + DII LQE + Sbjct: 246 LKIASYNVWNFNGGPEGRVKAYVERAQHLGQVLADCAADIIALQEVRFAYNRGGPLGPNQ 305 Query: 45 FPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 T Y SY + + + I++ P D + A+ + + Sbjct: 306 IQHFTHYLPGYQYVFQPAMSYPESILGRVEEGVAIISKFPIITHDYILLYRNASDSEDFH 365 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 RI + + + S E F+G ++ + Sbjct: 366 Q-RICLHAEIETPYLGLVHLFVTHLSLSEPAQDKSVVQIWEFMQRFSGPAVLMGDLNTEP 424 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI--- 221 R ++LQ+ D ++W + ++ G+ Sbjct: 425 GSKAIRFLQGVEEIDRVKTEELQDAWLMKYPEPRADRDG--TYW----RNEIRDSGLTFN 478 Query: 222 --------RIDHIMLSPEATSLLHSARI---DTKPRGWTKPSDHT 255 RID++ + S + I D RG+ SDH Sbjct: 479 ALKSHLEKRIDYMFV--RLPSDVRLHNISLLDDGKRGYAAASDHV 521 >gi|255011457|ref|ZP_05283583.1| hypothetical protein Bfra3_20100 [Bacteroides fragilis 3_1_12] gi|313149275|ref|ZP_07811468.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] gi|313138042|gb|EFR55402.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] Length = 365 Score = 63.7 bits (153), Expect = 3e-08, Method: Composition-based stats. Identities = 37/278 (13%), Positives = 80/278 (28%), Gaps = 25/278 (8%) Query: 2 SVVTVATWNVNSI-RARIHN----LAAWIKENNPDIICLQE--------TKTEDKNFPFE 48 + + + ++N+ S + N + +IK + DI+C+QE +K + Sbjct: 99 NSIKLLSYNIMSFGNMKKENGQNPILNYIKNSKADIVCMQEYAGSETAKIHLNNKEI-RQ 157 Query: 49 TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108 L+ Y K+ G I + + + + + L I Sbjct: 158 ALKDYPYRHIKQVGKTGAGSQIACYSKFPILSARMLDYQSNYNGSMVYDIKIGKDTVLLI 217 Query: 109 GNL-YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167 N Y+D + K + R + + + + + Sbjct: 218 NNHLESNKLTREDKVVYEDMLKDPKAGKVKSGIRQLVNKLAEASAIRSAQARAIAQEIAR 277 Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227 + S + + + Y + + RID+I+ Sbjct: 278 SPYPSVIVCGDFNDSPISYAHRVISQDLDDAFTESGRGLGISYNQNKFY----FRIDNIL 333 Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 +S +D K SDH P+ + +P+ Sbjct: 334 ISKNL--KASGCTVDNSI----KDSDHYPIWCYITLPD 365 >gi|39652288|dbj|BAD04858.1| reverse transcriptase [Tetraodon nigroviridis] Length = 1119 Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 33/265 (12%), Positives = 78/265 (29%), Gaps = 31/265 (11%) Query: 3 VVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 +T++T NV S+++R+ + +++ D+ +QE L L + Sbjct: 2 TLTISTINVRSVKSRVRAQSVLSFLNSFKSDVFLIQEC----------GLPFLKQYRHWE 51 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + S + + + Q +T + + L ++ + Sbjct: 52 EMWPQTSIWSGSNNNRND---GVAILIKNPQVLVKGSTVVRDGRALLAQLTFMGQDFNLL 108 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + ++ + L + + PL+ GD+N I + D Sbjct: 109 NIYGFNEKNDRYDLLEDLQSHMLGKVPLVVGGDFNCIL---SRKDRRGAGEDFKVDKTSV 165 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 ++ D + H ++++ + RID+ Sbjct: 166 LLQGICRDFKLQDCFKTMHPREEGFTWFSGDGT-----RASRIDYTFT--------RDCP 212 Query: 241 IDTKPRGWTKPSDHTPVIVSLDIPE 265 I SDH + +L + Sbjct: 213 ISDARLTPVFFSDHLMLSCTLSLSS 237 >gi|156101950|ref|XP_001616668.1| exodeoxyribonuclease III [Plasmodium vivax SaI-1] gi|148805542|gb|EDL46941.1| exodeoxyribonuclease III, putative [Plasmodium vivax] Length = 798 Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 27/110 (24%), Positives = 41/110 (37%), Gaps = 11/110 (10%) Query: 1 MSVVTVATWNVNS-------IRARIHNLAAWIKENNPDIICLQETKTEDK----NFPFET 49 M + +A+WNVN I+ R +A ++ + + DI+CLQETKT D +F Sbjct: 1 MESLQIASWNVNGWKKSCELIKHREVTVAQFLSKLHIDILCLQETKTNDSIIENDFRLLD 60 Query: 50 LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF 99 S Y K G I Y + + + F Sbjct: 61 AYSDEYETYWTCCKKRGGEKIQKGYSGLATYVGHKAKVICCCSDPFRNFF 110 Score = 45.2 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 28/77 (36%), Gaps = 14/77 (18%) Query: 187 QNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKP 245 D + + + ++ WD Y N+G RID+I + + L Sbjct: 532 CEDRMVDTFSFFYPSLNGKFTCWDTYKQHRISNEGSRIDYIFVDYVLYARL--------I 583 Query: 246 RGWT--KPSDHTPVIVS 260 RG S PV+++ Sbjct: 584 RGHPHLYAS---PVVLT 597 >gi|299142059|ref|ZP_07035193.1| AP endonuclease domain protein [Prevotella oris C735] gi|298576521|gb|EFI48393.1| AP endonuclease domain protein [Prevotella oris C735] Length = 368 Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 38/267 (14%), Positives = 74/267 (27%), Gaps = 23/267 (8%) Query: 4 VTVATWNVNSIRARIHN------LAAWIKENNPDIICLQETKTED-KNFPFETLQSLNYH 56 + V ++NV S + + +I+E PDI+CLQE T + +++ + Y Sbjct: 106 IKVMSYNVWSFAGWERHADGKFPILEYIREQQPDILCLQEAMTNEIGQARVDSVLNKIYA 165 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 + + S + I + N + + N G Sbjct: 166 YKDTMKFSPSSDCIALYSHYPIVSHERIVYPSRGNLSGAFEIKIGNDTVIVVNNHLETTG 225 Query: 117 --NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 N + + +++ + + Y + Sbjct: 226 LSNEDKREFKSMVKGNLLTSDAKQASYRLIDKLGEASAKRAVQADAVARYISKHSDRSMI 285 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI--RIDHIMLSPEA 232 + S + Y+ N G+ RIDHIM S + Sbjct: 286 VCGDFNDSPISYARHTIAKGLTDCFIATGNGLGVSYH------NGGMYVRIDHIMCSKDW 339 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIV 259 ++D SDH P++ Sbjct: 340 QPY--GCKVDRSI----GESDHYPILC 360 >gi|291515610|emb|CBK64820.1| Metal-dependent hydrolase [Alistipes shahii WAL 8301] Length = 380 Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 44/264 (16%), Positives = 78/264 (29%), Gaps = 18/264 (6%) Query: 4 VTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQETKTE-DKNFPFETLQSLNYHI 57 V V ++NV S R+ + ++ I+E PD+ICLQE + +L Y I Sbjct: 125 VKVMSYNVRSFYGEDGRSSVDDILRLIEEQAPDLICLQEFNARLAEQSEEFSLLGEKYEI 184 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 G+ S + L D + + + A + T+R+ N +L Sbjct: 185 AHFGRTQAPDSVYGSTLTILSKYRILRSDTVLTPSSSVWADVIVGEDTVRVFNNHLRSTA 244 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 S ++ + L Sbjct: 245 INASDNQFITSHQFLSDTARETKIRSIVTRLRENSVLRAAQVDSIAQVVGATRTRRIVCG 304 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 + + +R S + + + +RID+++ S L Sbjct: 305 DFNDTPMSYVYRTMARGLRDAFRECG--SGYSHTFRGFYNT--LRIDYVL-SGGFEPL-- 357 Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261 S + SDH PV+V L Sbjct: 358 SYEVLP-----VDYSDHHPVVVRL 376 >gi|146318326|ref|YP_001198038.1| putative 3'-exo-deoxyribonuclease [Streptococcus suis 05ZYH33] gi|145689132|gb|ABP89638.1| putative 3'-exo-deoxyribonuclease [Streptococcus suis 05ZYH33] Length = 75 Score = 63.3 bits (152), Expect = 3e-08, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 10/60 (16%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + +WN++S+ A + + + + DII +QETK DK + L+ L Sbjct: 1 MKLISWNIDSLNAALTAKSPRALLSRAVIDTLVTEDADIIAIQETKLSDKGPTKKHLEIL 60 >gi|326436925|gb|EGD82495.1| hypothetical protein PTSG_03143 [Salpingoeca sp. ATCC 50818] Length = 548 Score = 63.3 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 37/289 (12%), Positives = 82/289 (28%), Gaps = 34/289 (11%) Query: 4 VTVATWNVNSIRA--------RIHNLAAWIKENNPDIICLQETK---TEDKNFPFETLQS 52 + +A++N+ +I R++ LAA ++ +PD+I QE + D Sbjct: 250 LRIASYNIWNINEFDDGTYEERLNRLAAHVRTEDPDVIAFQEVRHDALRDSQPASLAALL 309 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT---LRIG 109 YH +Y + + + + P +D + + + LR+ Sbjct: 310 PTYHYVYQPAMTYAEQVFGRVEEGVAVFSKYPIVGIDYRLLYRNRRNHADAHQRVVLRVN 369 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 G + ++ + E+ + D Sbjct: 370 VDAPHLGPVSIFVSHYALDETARQRGCVETWEFIKEDNSSTQLFLGDLNAEPDTPCIRFL 429 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYY----ADSWSKNKGI---- 221 A + ++ +S + ++ G+ Sbjct: 430 SGKAPLLEATTDGVYDAWLELHPEPRPGSN--CAKFSGNAWRTADIRKDEERDVGLTFNT 487 Query: 222 -------RIDHIMLSPEATSLLHSARIDTKPRGWTK--PSDHTPVIVSL 261 RID+ ++ + ID PR + SDH +++ L Sbjct: 488 FGEQLVKRIDYALMRHPHMD-VTVCSIDVFPREREEHPASDHLGLVLEL 535 >gi|1791243|gb|AAB41224.1| ORF2 [Rattus norvegicus] Length = 1300 Score = 63.3 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 76/251 (30%), Gaps = 32/251 (12%) Query: 6 VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + N+N + + I L WI+ +P CLQET DK+ + ++ + GQK Sbjct: 37 LISLNINGLNSPIKRHRLTNWIRNEDPAFCCLQETHLRDKDRHYLRVKGWKTTFQANGQK 96 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 GVAIL + + + I I + Sbjct: 97 KQAGVAILISNKINF--------------QLKVIKKDKEGHFIFIKGKIHQDELSILNIY 142 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + + + + I GD+N D +D EV Sbjct: 143 APNTRAPTYVKETLLKLKTHIAPHTIIVGDFNTPLSSMDRSWKQKLNSDVDRLREVMSQM 202 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 TD R + Y+F+ ++SK IDHI+ + I Sbjct: 203 ------DLTDIYRTFYPKAKGYTFFSAPHGTFSK-----IDHIIGQKTGLNRYRKIEIIP 251 Query: 244 KPRGWTKPSDH 254 SDH Sbjct: 252 -----CMLSDH 257 >gi|328954136|ref|YP_004371470.1| Endonuclease/exonuclease/phosphatase [Desulfobacca acetoxidans DSM 11109] gi|328454460|gb|AEB10289.1| Endonuclease/exonuclease/phosphatase [Desulfobacca acetoxidans DSM 11109] Length = 253 Score = 63.3 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 33/270 (12%), Positives = 70/270 (25%), Gaps = 29/270 (10%) Query: 4 VTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 + + T+N+ N + R + I PD++ QE + Sbjct: 1 MRIMTFNLRFQNPLDGPNQWKFRKELVLETIWAYQPDLLAAQEVTIP--QLDYLAANLTG 58 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL--RIGNLY 112 Y + + + + + G++ + + Sbjct: 59 YEPFIKHRNIDLTCQYPTIFFRSQTIVAGAGNEFWLSETPEVHRSKSWESAFPRMVTYGS 118 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 + + D L L E + I+ + + Sbjct: 119 FREVDRDLWFCFADTHLDHVSALARQKAATMLREFFLQLNQPAILAGDFNDHPQSSVHRV 178 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 + ++ F + + H + G RID I+++ Sbjct: 179 LARGDSPFRDSWEVLGH-FEEGVSTQHKFDGEF-------------FGGRIDWILITEPF 224 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 L +A I T + PSDH P V ++ Sbjct: 225 --RLKAAEIITYNQAKQYPSDHFPYYVEVN 252 >gi|281312469|sp|A8XU68|TDP2_CAEBR RecName: Full=5'-tyrosyl-DNA phosphodiesterase; Short=5'-Tyr-DNA phosphodiesterase gi|309357072|emb|CAP36193.2| hypothetical protein CBG_18823 [Caenorhabditis briggsae AF16] Length = 337 Score = 63.3 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 46/274 (16%), Positives = 86/274 (31%), Gaps = 49/274 (17%) Query: 4 VTVATWNVNSI--RA---RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 +++ +WN++ + R+ R+ +A +K+ NPDI+ LQE + P + LQSL Sbjct: 94 LSLMSWNIDGLDGRSLATRMKAVATIVKKVNPDILFLQEV-VDRDLEPIDKLQSLYKIYY 152 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + Y ++SK +E + + + +I + + N +L + Sbjct: 153 SNKGCQYYTAILVSKMFEVEKHDVVHFQNSGMYRTLQIVEGSIGGMKVFLVNTHLE--SM 210 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 L F GD N+ + Sbjct: 211 RDHRAQRMAQFSFCMDRCAEIIANNPGCFLFFGGDLNLRDEEIS---------------- 254 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG--IRIDHIM--------- 227 + + + A DT +++ Y D+ G +R D I Sbjct: 255 ------SIPDGVLDAWVSAGCDTKTKWTWDTYKNDNKQGFNGAKMRFDRIYWHGPFNQVH 308 Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 S E + S PSDH + + Sbjct: 309 FSLEGRQRIRSC--------LCFPSDHWAINATF 334 >gi|326664781|ref|XP_003197884.1| PREDICTED: transposon TX1 uncharacterized 149 kDa protein-like [Danio rerio] Length = 1143 Score = 63.3 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 45/267 (16%), Positives = 88/267 (32%), Gaps = 33/267 (12%) Query: 1 MSVVTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 M+ +T+ T NV S+RA R ++ +++K N D+ LQE + PF T NY Sbjct: 1 MA-LTITTINVRSVRAIVRAQSILSFLKSFNSDVFLLQEC-----SLPFLT----NYR-- 48 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 ++ + + + + +T + + L +L Sbjct: 49 -KWEEIWTPGLSIWSGSNFIKNDGVAILIKNPNILVKGSTVVRDGRALLAHLAFLEQDFN 107 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + + + L + + PL+FAGD+N + D +D Sbjct: 108 VLNVYGFNNKHERHELLEDLQPHMLGKAPLVFAGDFNCVLTSKDRKGKT---DDFRVDKT 164 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 ++ D + H ++++ + RID+I Sbjct: 165 SVLLQGIAKDFKLVDCFKTLHQREEGFTWFSS-----DCTRASRIDYIFARD-------- 211 Query: 239 ARIDTKPR-GWTKPSDHTPVIVSLDIP 264 I + R SDH + + +P Sbjct: 212 -IIPSDARLTPVFFSDHHMLSCTFSLP 237 >gi|150951488|ref|XP_001387814.2| AP endonuclease [Scheffersomyces stipitis CBS 6054] gi|149388636|gb|EAZ63791.2| AP endonuclease [Pichia stipitis CBS 6054] Length = 482 Score = 63.3 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 8/73 (10%) Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSP-EATSLLHSARIDTKPRGWTKPSDHTPVIVS- 260 +Y+ W+ S + N G RID I+ S + +A I G SDH PV Sbjct: 322 QMYTVWNTLNSSRAINFGSRIDLILASSYRMIKNISNADIWPFILG----SDHCPVFTDF 377 Query: 261 --LDIPEPRKKQQ 271 L+I +P + + Sbjct: 378 EALEIDKPEESKS 390 Score = 41.7 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 17/52 (32%), Gaps = 9/52 (17%) Query: 3 VVTVATWNVNSIRARIH-----NLAA----WIKENNPDIICLQETKTEDKNF 45 + T+NVN ++ + DII LQE K N Sbjct: 23 TIRYVTFNVNGVKTLFNYYPWTQFNQDYDLLFSSLQADIITLQELKLSSSNI 74 >gi|194695010|gb|ACF81589.1| unknown [Zea mays] Length = 161 Score = 63.3 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 35/90 (38%), Gaps = 8/90 (8%) Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG--IRIDHIMLSPEATSL 235 E R+ L DA R H + + + K +G +RID+ ++S + Sbjct: 58 ERRRFGNILFQGKLVDAYRHLHKEKDIDGGFSWSGHPIGKYRGKRMRIDYFLVSEQLKDR 117 Query: 236 LHSARIDTKPRGWT----KPSDHTPVIVSL 261 + S + RG SDH PV + L Sbjct: 118 IVSCEMH--GRGIELDGFYGSDHCPVSLEL 145 >gi|159491237|ref|XP_001703579.1| predicted protein [Chlamydomonas reinhardtii] gi|158270653|gb|EDO96491.1| predicted protein [Chlamydomonas reinhardtii] Length = 598 Score = 63.3 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 58/291 (19%), Positives = 92/291 (31%), Gaps = 41/291 (14%) Query: 4 VTVATWNVNSIRARIHNLAA--------WIKENNPDIICLQETK--TEDKNFPFET---L 50 + +AT N+ S+R + A W E DIICLQET FE L Sbjct: 42 LRIATHNMQSLR--LPGAARRVAAAALIW-AELRLDIICLQETHWTCRADQAAFEQTLQL 98 Query: 51 QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-------- 102 + H+ + +V + + A + T Sbjct: 99 IAYELHLSGWKVTGAQWSTSRATAGVAFLVRQELWESSTITAPALSPVPTAMLAGRLAVL 158 Query: 103 -----TQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII 157 +++ I N Y P + + + ++ R S E +I+AGD+N + Sbjct: 159 KLRWGGRSITIANTYFPAASTHAAEQAKRELISQLRTQAALSAAATAGEVVIWAGDFNFV 218 Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK 217 + + + + D R H T YS Y A Sbjct: 219 --ENPALDSSAGPGGRPGDAPLAALLRAADQPQMVDMYRHRHPTARCYSH-LYRA---PV 272 Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268 G R+D I +S A + + A I SDH P + L +P P Sbjct: 273 KGGSRLDRIYVSAAAAAAVCHADI-----ALVSSSDHRPAFIDL-LPAPSP 317 >gi|124485534|ref|YP_001030150.1| hypothetical protein Mlab_0711 [Methanocorpusculum labreanum Z] gi|124363075|gb|ABN06883.1| Endonuclease/exonuclease/phosphatase [Methanocorpusculum labreanum Z] Length = 256 Score = 63.3 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 39/262 (14%), Positives = 74/262 (28%), Gaps = 26/262 (9%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 +++ + TWN R +I++ N DI+ +QE ++ DK + Y++E Sbjct: 21 NIMKIITWNCGG-NFRKK--FRYIEKYNADILVIQECESIDKIQSANQTIVIKYNVEWIN 77 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 S L + +V + ++ + I + Sbjct: 78 DGSQRTDKGLGIFLKKGVVFKKQNWETFGLNHYLAVKIENKFDLIGIWTENPGYIRDACV 137 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + + + ++ GD N + E E+ Sbjct: 138 YLQMYEKLFTNKSEN-----------VLLCGDLNSFKKDKYTSKTKNIETYFKKLYEMNI 186 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 D L +F + ID+I + E + Sbjct: 187 HSCYHYTYDKELG-----DKEELKTFISPNGKRYH------IDYIFTNMEYSGFFID-DF 234 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 D SDH P+ V+LDI Sbjct: 235 DNFKVSGKNISDHVPLGVNLDI 256 >gi|298482489|ref|ZP_07000675.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. D22] gi|298271468|gb|EFI13043.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. D22] Length = 316 Score = 63.3 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 47/302 (15%), Positives = 86/302 (28%), Gaps = 45/302 (14%) Query: 2 SVVTVATWNV-----------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETL 50 + TVA++N+ N R +A ++ ++ DI QE E L Sbjct: 26 TTFTVASYNLRNANGNDSLHGNGWGQRYPVIAKMVQYHDFDIFGTQECFLHQLKDMKEAL 85 Query: 51 QSLNY-HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 +Y + K+ + + + L + + Sbjct: 86 PGYDYIGVGRDDGKTQGEHSAIFYRTDKFDIIEKGDFWLSETPDVPSKGWDAVLPRICSW 145 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 + ++ + I + R S L E+ N+ +N Sbjct: 146 GHFKCKDTGFEFLFFNLHMDHIGKKARVESAYLVQEKMKELGKGKNLPAILTGDFNVDQT 205 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 +E + F A +F + +S+++ RIDH+ +S Sbjct: 206 HQSYNAFVEKGVLCDSYEKCDFRYATNG--------TFNSFNPNSFTE---SRIDHVFVS 254 Query: 230 PEA--------------------TSLLHSA--RIDTKPRGWTKPSDHTPVIVSLDIPEPR 267 P + ID K PSDH PV V L+ E + Sbjct: 255 PAFHVKRYGILTDTYRSIVGNGEKENANDCPEEIDIKAYQARTPSDHFPVKVELEFDERQ 314 Query: 268 KK 269 +K Sbjct: 315 QK 316 >gi|46205835|ref|ZP_00048037.2| COG0708: Exonuclease III [Magnetospirillum magnetotacticum MS-1] Length = 155 Score = 63.3 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 2/122 (1%) Query: 22 AAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKSYNGVAILSKYQPIEIV 80 ++ + PD++CLQETK D+ FP + + Y +I GQK YNGVAI+S++ + Sbjct: 1 MRFLAQAQPDVLCLQETKCPDELFPLKAFKGSGYENIVFAGQKGYNGVAIISRFPLLTRA 60 Query: 81 THLPGDDLD-VQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFAS 139 + D L + + Y+P G + + K + FL+ Sbjct: 61 VMSFCERADARHISAALGPEAGPAAGLVLHDFYVPAGGDLPHRDLNPKFAHKLDFLQELR 120 Query: 140 QR 141 Sbjct: 121 AW 122 >gi|222445160|ref|ZP_03607675.1| hypothetical protein METSMIALI_00781 [Methanobrevibacter smithii DSM 2375] gi|222434725|gb|EEE41890.1| hypothetical protein METSMIALI_00781 [Methanobrevibacter smithii DSM 2375] Length = 231 Score = 63.3 bits (152), Expect = 4e-08, Method: Composition-based stats. Identities = 40/258 (15%), Positives = 69/258 (26%), Gaps = 27/258 (10%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + +WN N + R +I + DI +QE +N Sbjct: 1 MRIISWNANG-KFREK--FPFILNEDADIYVIQEC----ENPEISNSDEYIEFASNYYWV 53 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 N L + + L D FI + L + G + Sbjct: 54 GENQYYGLGIFAKNNVKLELMDLDAKGLRYFIPVNVNDDFNLLGVWTNPDMDGTKTS--- 110 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 I ++ E +I GD+N D + C +E + Sbjct: 111 --YYPKEITKYYEEHKDSEFFNEDMIICGDFNC-----DVRLKGSHAKNVCEVIE--KLS 161 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + + +F+ Y + DHI +S + I Sbjct: 162 ECGLVDIYHQLTGEKEGEETKPTFYMYRHLDKPYHV----DHIFMSS---DKIKDLEIC- 213 Query: 244 KPRGWTKPSDHTPVIVSL 261 W SDH P+I + Sbjct: 214 DADKWLHLSDHVPLIFEI 231 >gi|254885217|ref|ZP_05257927.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|294777877|ref|ZP_06743321.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides vulgatus PC510] gi|319640383|ref|ZP_07995107.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. 3_1_40A] gi|254838010|gb|EET18319.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|294448331|gb|EFG16887.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides vulgatus PC510] gi|317387986|gb|EFV68841.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. 3_1_40A] Length = 472 Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats. Identities = 34/278 (12%), Positives = 66/278 (23%), Gaps = 27/278 (9%) Query: 1 MSVVTVATWNVN----------SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETL 50 +S + V +N+ + + IK NPD+I + ET + L Sbjct: 206 LSQLKVMAFNIFHGGHELGQEVGVN----RVVEVIKAENPDVIGMVETYGS-GAIIADAL 260 Query: 51 QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR--- 107 Y + + + + ++ + + Sbjct: 261 GYYFYLRSSNLSIMSRYPITDTYDLYDSFNCSAATLQISPSQQINYINLWLDYRPITNDQ 320 Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167 I + ++ + Sbjct: 321 INACESIENIIAGEWSRRAAQLQSILKAFPSQWNTMETPLIVSGDFNSDSHLDWKDDTKN 380 Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF--WDYYADSWSKNKGIRIDH 225 + ++ + F D+ R H Y W A RID Sbjct: 381 MNGHNGYVIEWPTSKLMEK--AHFIDSYREIHPDVKKYPCLTWSTMAK---NELQYRIDF 435 Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 I + + S ID P PSDH V+ + ++ Sbjct: 436 IYYKGKDIKAIQSEMIDKHP--VRYPSDHAAVVTTFNL 471 >gi|319900045|ref|YP_004159773.1| Endonuclease/exonuclease/phosphatase [Bacteroides helcogenes P 36-108] gi|319415076|gb|ADV42187.1| Endonuclease/exonuclease/phosphatase [Bacteroides helcogenes P 36-108] Length = 295 Score = 62.9 bits (151), Expect = 4e-08, Method: Composition-based stats. Identities = 38/268 (14%), Positives = 77/268 (28%), Gaps = 27/268 (10%) Query: 7 ATWNV------NSIRA---RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57 A++N+ +S+ A R + A ++ ++ DI +QE + + LN + Sbjct: 44 ASFNIRMDTPKDSVNAWPNRKELVKALVRFHDFDIFGVQE--AFRHQL--DGILELNEYA 99 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTH--LPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + N S + GD + T RI + Sbjct: 100 GIGEGRDGNDEGEHSAIIYKKSRFTLLDKGDFWYSETPDRIGLGWDATCCNRICSWGKFK 159 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 N Y + + + + + P D Sbjct: 160 ENKTGKEFYFFNSHFDHQGVVARR---------ESSKLLLKKIREIAGNTPAFSTGDYNA 210 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 T + + + D+ + + + Y N RID++ ++ E Sbjct: 211 TPDSEPIRIIVSDGLLKDSYTLSEQAPYG-TVGTYQGFKRLANSQSRIDYVFVTKEV--R 267 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + + PSDH PV+V ++ Sbjct: 268 ILKYGTLNEVPNGKFPSDHFPVMVVAEL 295 >gi|328684674|gb|AEB33765.1| DNA lyase APN2 [Erysiphe necator] Length = 284 Score = 62.9 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 22/53 (41%), Gaps = 4/53 (7%) Query: 210 YYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 +S N G RID+++ S + + I G SDH PV L+ Sbjct: 1 QKTNSRPGNLGSRIDYVLCSEDWKDWFCDSNIQEGLMG----SDHCPVYAVLN 49 >gi|186507183|ref|NP_001118500.1| ARP; DNA-(apurinic or apyrimidinic site) lyase [Arabidopsis thaliana] gi|330254891|gb|AEC09985.1| apurinic endonuclease-redox protein [Arabidopsis thaliana] Length = 403 Score = 62.9 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 13/111 (11%) Query: 4 VTVATWNVNSIRARIH----NLAAWIKENNPDIICLQETKTEDKNFPFETLQS---LNYH 56 V V TWNVN +R + + + N DI+CLQETK + K+ E ++ Y Sbjct: 276 VKVMTWNVNGLRGLLKFESFSALQLAQRENFDILCLQETKLQVKDV--EEIKKTLIDGYD 333 Query: 57 IETCGQK----SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 Y+G AI+S+ +P+ + D + R + A F Sbjct: 334 HSFWSCSVSKLGYSGTAIISRIKPLSVRYGTGLSGHDTEGRIVTAEFDSFY 384 >gi|255530398|ref|YP_003090770.1| endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM 2366] gi|255343382|gb|ACU02708.1| Endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM 2366] Length = 370 Score = 62.9 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 46/281 (16%), Positives = 85/281 (30%), Gaps = 37/281 (13%) Query: 3 VVTVATWNVNSIR--------ARIHNLAAWIKENNPDIICLQE--TKTEDKNFPFETLQS 52 ++ + T+NV+S + + + I+ NPDIIC QE T+ K P++ S Sbjct: 105 LIRMMTYNVHSFKPYGEGNIESVKQQMLDLIENENPDIICFQEYFTR---KKGPYDITDS 161 Query: 53 LN------YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDL--DVQARFIEATFTINTQ 104 L YH ++ L+ + I I T+ + Sbjct: 162 LKRILNKPYHYFEPISQNDYEATGLAIFSKYPIKNKGTIAFNKVYRGNSSIYVDVTVKNK 221 Query: 105 TLRIGNLYLPHGNP--ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD 162 RI N+++ + D + L + + L + + Sbjct: 222 MFRIYNVHMQSISFQEQDYMYLDQVKYQMDPKLYASKRILVMLRNAFLKRSEQVDIMKAH 281 Query: 163 CYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR 222 + A + S+ Q T ++ + + Sbjct: 282 IKTCELPFIIAGDFNDTPASYAVKQMTKSLKNTFKEQGTGFGKTY----NGKFPNFQ--- 334 Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 ID+I + + + RI K SDH PV L + Sbjct: 335 IDYIATTQNFD--VMNYRIIEA-----KLSDHFPVRSDLRL 368 >gi|330895697|gb|EGH27989.1| exodeoxyribonuclease III [Pseudomonas syringae pv. japonica str. M301072PT] Length = 77 Score = 62.9 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 4/61 (6%) Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 YS+W + N G R D+ +L+P + SAR+ +PR S H P+IV D Sbjct: 17 DQYSWWPDNEQAEMLNLGWRFDYQILTPGLRRFVRSARLPRQPR----FSQHAPLIVDYD 72 Query: 263 I 263 Sbjct: 73 W 73 >gi|302820700|ref|XP_002992016.1| hypothetical protein SELMODRAFT_430260 [Selaginella moellendorffii] gi|300140138|gb|EFJ06865.1| hypothetical protein SELMODRAFT_430260 [Selaginella moellendorffii] Length = 379 Score = 62.9 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 35/190 (18%), Positives = 60/190 (31%), Gaps = 23/190 (12%) Query: 98 TFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII 157 + + N+Y P+ + D + L+ +I GD NI Sbjct: 186 CIVTDHGYFVLFNIYGPNVGCGDVERQDFMLQCR------LESILKQGRRIIIVGDLNIS 239 Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK 217 P P + +P + R + + A Y+ W + + Sbjct: 240 PYPINSCDPGPEFDTNPSRQWFRSLL--VSEVVRFQTRFACFILKEAYTCWSQASGAEEF 297 Query: 218 NKGIRIDHIMLSPEATSL--------LHSARIDTKPRGWTK------PSDHTPVIVSLD- 262 N G RIDH++++ A++DT PR SDH PVI+ Sbjct: 298 NYGSRIDHVLIAGPCAGHYMCDILLEFKRAKLDTLPRWSGGRSLKLDGSDHAPVILQFKH 357 Query: 263 IPEPRKKQQD 272 +P + Sbjct: 358 LPSIPPHEAP 367 >gi|225470786|ref|XP_002269691.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 693 Score = 62.9 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 34/259 (13%), Positives = 72/259 (27%), Gaps = 31/259 (11%) Query: 4 VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + +WN + +R + +++ PDI+ +QETK + + Sbjct: 1 MKIISWNTRGLGSRKKRRVVKDFLRSEKPDIVMIQETK--------KAECDRRFVGSVWT 52 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 ++ + + I+ L + + + + + + Sbjct: 53 ARNKEWAVLPACGASGGILVMWDSKKLHSEEVVLGSFSVSVKFAVDGSEQFWLSAVYGPN 112 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + K W + F F + ++ F E Sbjct: 113 STALRKDFWEELSDIFCLSSPCWCVGGDFNVIRRCSEKLGGGRLTPSMKDLDDFIRENEL 172 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 L++ FT + H R+D + S E L + Sbjct: 173 IDPPLRSASFTWSNMQEHPVCK------------------RLDRFLYSNEWEQLFPQSLQ 214 Query: 242 DTKPRGWTKPSDHTPVIVS 260 D PR SDH P+++ Sbjct: 215 DVLPR---WTSDHWPIVLE 230 >gi|328873522|gb|EGG21889.1| hypothetical protein DFA_01775 [Dictyostelium fasciculatum] Length = 296 Score = 62.9 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 39/289 (13%), Positives = 73/289 (25%), Gaps = 36/289 (12%) Query: 3 VVTVATWNV------NSIRA---RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + ++N+ + I R + + IK+ P II QE E + L Sbjct: 12 TLRIMSFNIRYDSHKDGINNWVNRRNLVVDTIKQTKPTIIGFQE--CLKNQI-EEIINDL 68 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 G +G++ + D + + + Sbjct: 69 GGDYSFVGVGRDDGLSKGEYSPIAYNNKLVRYDHGSHFWISQDCYVAGSKSWDTMCPRIA 128 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 G + L S E L+ + + C + + Sbjct: 129 TWGKFKYHNNSKKSFYTLNTHLDHMSSLARSEGTLLIKSFVSHLDPSIPCIITGDFNEEV 188 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR----------- 222 + +G YS + S + N R Sbjct: 189 GSKPYRNIIDKMDDMVGHKYMNMLKIPIAPTYSLKTFKDCSKAANN--RDGPFHTFTGFT 246 Query: 223 ------IDHIMLSPEATSLLHSARIDTKPRGWT----KPSDHTPVIVSL 261 ID+I ++ S + ++ T KPSDH P+ L Sbjct: 247 DEYKVTIDYIFVNASVKS-VDKFQVLTGHLKIETDGLKPSDHLPIYADL 294 >gi|296478229|gb|DAA20344.1| craniofacial development protein 2 [Bos taurus] Length = 592 Score = 62.9 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 37/291 (12%), Positives = 72/291 (24%), Gaps = 37/291 (12%) Query: 6 VATWNVNSIRARIHNLAAWIKEN----NPDIICLQETKTE-DKNFPFETLQSLNYHIETC 60 + TWNV S+ +K+ N DI+ + E K + H Sbjct: 245 IGTWNVRSMN---PGKLDVVKQEMERINIDILGISELKWTGMGELNSDD------HYIYY 295 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + ++ + + G +L I Sbjct: 296 CGQQSLRRNGVALIVNKRVRNAIIGCNLKNDRMISVRFQGKPFNLTVIQVYAPTPYAEEG 355 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + + L + IP + + +E Sbjct: 356 EVYRFYEDLQHLLEITPKIDVLFIIGDWNAKVGSQEIPGITGRFGLGMQNEAGRRLIEFC 415 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 N + LY++ + ID+I+ S + SA+ Sbjct: 416 H-----HNRLVITNTLFQQPSRRLYTWTSPDGRYRDQ-----IDYIICRQRWRSSVQSAK 465 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI----------PEPRKKQQDSTSQNMKPI 281 G SDH +I + P ++D+T++ K + Sbjct: 466 TRP---GADCGSDHKLLIAKFRLKLKIIPKTTRPFRVTNEEDATNEEAKSV 513 >gi|209869972|dbj|BAG75458.1| p97Bcnt protein [Capra hircus] Length = 592 Score = 62.9 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 37/291 (12%), Positives = 72/291 (24%), Gaps = 37/291 (12%) Query: 6 VATWNVNSIRARIHNLAAWIKEN----NPDIICLQETKTE-DKNFPFETLQSLNYHIETC 60 + TWNV S+ +K+ N DI+ + E K + H Sbjct: 245 IGTWNVRSMN---PGKLDVVKQEMERINIDILGISELKWTGMGELNSDD------HYIYY 295 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + ++ + + G +L I Sbjct: 296 CGQQSLRRNGVALIVNKRVRNAIIGCNLKNDRMISVRFQGKPFNLTVIQVYAPTPYAEEG 355 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + + L + IP + + +E Sbjct: 356 EVYRFYEDLQHLLEITPKIDVLFIIGDWNAKVGSQEIPGITGRFGLGMQNEAGRRLIEFC 415 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 N + LY++ + ID+I+ S + SA+ Sbjct: 416 H-----HNRLVITNTLFQQPSRRLYTWTSPDGRYRDQ-----IDYIICRQRWRSSVQSAK 465 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI----------PEPRKKQQDSTSQNMKPI 281 G SDH +I + P ++D+T++ K + Sbjct: 466 TRP---GADCGSDHKLLIAKFRLKLKIIPKTTRPFRVTNEEDATNEEAKSV 513 >gi|2114148|dbj|BAA20066.1| bucentaur [Bos taurus] Length = 435 Score = 62.9 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 37/291 (12%), Positives = 72/291 (24%), Gaps = 37/291 (12%) Query: 6 VATWNVNSIRARIHNLAAWIKEN----NPDIICLQETKTE-DKNFPFETLQSLNYHIETC 60 + TWNV S+ +K+ N DI+ + E K + H Sbjct: 130 IGTWNVRSMN---PGKLDVVKQEMERINIDILGISELKWTGMGELNSDD------HYIYY 180 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + ++ + + G +L I Sbjct: 181 CGQQSLRRNGVALIVNKRVRNAIIGCNLKNDRMISVRFQGKPFNLTVIQVYAPTPYAEEG 240 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + + L + IP + + +E Sbjct: 241 EVYRFYEDLQHLLEITPKIDVLFIIGDWNAKVGSQEIPGITGRFGLGMQNEAGRRLIEFC 300 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 N + LY++ + ID+I+ S + SA+ Sbjct: 301 H-----HNRLVITNTLFQQPSRRLYTWTSPDGRYRDQ-----IDYIICRQRWRSSVQSAK 350 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI----------PEPRKKQQDSTSQNMKPI 281 G SDH +I + P ++D+T++ K + Sbjct: 351 TRP---GADCGSDHKLLIAKFRLKLKIIPKTTRPFRVTNEEDATNEEAKSV 398 >gi|2309001|dbj|BAA21722.1| BCNT [Bos taurus] Length = 391 Score = 62.9 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 37/291 (12%), Positives = 72/291 (24%), Gaps = 37/291 (12%) Query: 6 VATWNVNSIRARIHNLAAWIKEN----NPDIICLQETKTE-DKNFPFETLQSLNYHIETC 60 + TWNV S+ +K+ N DI+ + E K + H Sbjct: 114 IGTWNVRSMN---PGKLDVVKQEMERINIDILGISELKWTGMGELNSDD------HYIYY 164 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + ++ + + G +L I Sbjct: 165 CGQQSLRRNGVALIVNKRVRNAIIGCNLKNDRMISVRFQGKPFNLTVIQVYAPTPYAEEG 224 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + + L + IP + + +E Sbjct: 225 EVYRFYEDLQHLLEITPKIDVLFIIGDWNAKVGSQEIPGITGRFGLGMQNEAGRRLIEFC 284 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 N + LY++ + ID+I+ S + SA+ Sbjct: 285 H-----HNRLVITNTLFQQPSRRLYTWTSPDGRYRDQ-----IDYIICRQRWRSSVQSAK 334 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI----------PEPRKKQQDSTSQNMKPI 281 G SDH +I + P ++D+T++ K + Sbjct: 335 TRP---GADCGSDHKLLIAKFRLKLKIIPKTTRPFRVTNEEDATNEEAKSV 382 >gi|22779307|dbj|BAC15592.1| bcnt [Bos taurus] Length = 592 Score = 62.9 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 37/291 (12%), Positives = 72/291 (24%), Gaps = 37/291 (12%) Query: 6 VATWNVNSIRARIHNLAAWIKEN----NPDIICLQETKTE-DKNFPFETLQSLNYHIETC 60 + TWNV S+ +K+ N DI+ + E K + H Sbjct: 245 IGTWNVRSMN---PGKLDVVKQEMERINIDILGISELKWTGMGELNSDD------HYIYY 295 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + ++ + + G +L I Sbjct: 296 CGQQSLRRNGVALIVNKRVRNAIIGCNLKNDRMISVRFQGKPFNLTVIQVYAPTPYAEEG 355 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + + L + IP + + +E Sbjct: 356 EVYRFYEDLQHLLEITPKIDVLFIIGDWNAKVGSQEIPGITGRFGLGMQNEAGRRLIEFC 415 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 N + LY++ + ID+I+ S + SA+ Sbjct: 416 H-----HNRLVITNTLFQQPSRRLYTWTSPDGRYRDQ-----IDYIICRQRWRSSVQSAK 465 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI----------PEPRKKQQDSTSQNMKPI 281 G SDH +I + P ++D+T++ K + Sbjct: 466 TRP---GADCGSDHKLLIAKFRLKLKIIPKTTRPFRVTNEEDATNEEAKSV 513 >gi|27807389|ref|NP_777225.1| craniofacial development protein 2 [Bos taurus] gi|2114146|dbj|BAA20065.1| bucentaur [Bos taurus] Length = 592 Score = 62.9 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 37/291 (12%), Positives = 72/291 (24%), Gaps = 37/291 (12%) Query: 6 VATWNVNSIRARIHNLAAWIKEN----NPDIICLQETKTE-DKNFPFETLQSLNYHIETC 60 + TWNV S+ +K+ N DI+ + E K + H Sbjct: 245 IGTWNVRSMN---PGKLDVVKQEMERINIDILGISELKWTGMGELNSDD------HYIYY 295 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + ++ + + G +L I Sbjct: 296 CGQQSLRRNGVALIVNKRVRNAIIGCNLKNDRMISVRFQGKPFNLTVIQVYAPTPYAEEG 355 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + + L + IP + + +E Sbjct: 356 EVYRFYEDLQHLLEITPKIDVLFIIGDWNAKVGSQEIPGITGRFGLGMQNEAGRRLIEFC 415 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 N + LY++ + ID+I+ S + SA+ Sbjct: 416 H-----HNRLVITNTLFQQPSRRLYTWTSPDGRYRDQ-----IDYIICRQRWRSSVQSAK 465 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI----------PEPRKKQQDSTSQNMKPI 281 G SDH +I + P ++D+T++ K + Sbjct: 466 TRP---GADCGSDHKLLIAKFRLKLKIIPKTTRPFRVTNEEDATNEEAKSV 513 >gi|82592672|sp|O02751|CFDP2_BOVIN RecName: Full=Craniofacial development protein 2; AltName: Full=p97 bucentaur protein Length = 592 Score = 62.9 bits (151), Expect = 5e-08, Method: Composition-based stats. Identities = 37/291 (12%), Positives = 72/291 (24%), Gaps = 37/291 (12%) Query: 6 VATWNVNSIRARIHNLAAWIKEN----NPDIICLQETKTE-DKNFPFETLQSLNYHIETC 60 + TWNV S+ +K+ N DI+ + E K + H Sbjct: 245 IGTWNVRSMN---PGKLDVVKQEMERINIDILGISELKWTGMGELNSDD------HYIYY 295 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + ++ + + G +L I Sbjct: 296 CGQQSLRRNGVALIVNKRVRNAIIGCNLKNDRMISVRFQGKPFNLTVIQVYAPTPYAEEG 355 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + + L + IP + + +E Sbjct: 356 EVYRFYEDLQHLLEITPKIDVLFIIGDWNAKVGSQEIPGITGRFGLGMQNEAGRRLIEFC 415 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 N + LY++ + ID+I+ S + SA+ Sbjct: 416 H-----HNRLVITNTLFQQPSRRLYTWTSPDGRYRDQ-----IDYIICRQRWRSSVQSAK 465 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI----------PEPRKKQQDSTSQNMKPI 281 G SDH +I + P ++D+T++ K + Sbjct: 466 TRP---GADCGSDHKLLIAKFRLKLKIIPKTTRPFRVTNEEDATNEEAKSV 513 >gi|302866198|ref|YP_003834835.1| endonuclease/exonuclease/phosphatase [Micromonospora aurantiaca ATCC 27029] gi|302569057|gb|ADL45259.1| Endonuclease/exonuclease/phosphatase [Micromonospora aurantiaca ATCC 27029] Length = 265 Score = 62.9 bits (151), Expect = 6e-08, Method: Composition-based stats. Identities = 37/271 (13%), Positives = 78/271 (28%), Gaps = 19/271 (7%) Query: 3 VVTVATWNVNSIRA---------RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 ++ V TWN IR R + + + PD++ LQE + D + L Sbjct: 1 MLRVMTWN---IRTGGRDGDGTDRRDRIVSVVTAQRPDVLALQELRGMDATLGGLAGR-L 56 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 VA+L + + L + + +L Sbjct: 57 GMTPYLARSCFGQPVAVLVRPPLRVLRAGRVRRPFHH--AAARVQVATGAGPLTVFSTHL 114 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + D ++ R L + + + Sbjct: 115 NPYSGGRRRMEADWLAAALRRTGGELALLAGDMNTLEPTADHTARLAGLATPYRRRHLRR 174 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 ++ +L + G D + D + + + G+R+D+++ +P Sbjct: 175 DGRTVDTRAVARLLDAGLVDLWPWSGGDEPGGLTVPTRHGGAEF--AGMRLDYLLATPAL 232 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + + R + SDH PV+ +D+ Sbjct: 233 ADRVRAVR-VVRDGDADSASDHYPVLAEVDL 262 >gi|322417960|ref|YP_004197183.1| endonuclease/exonuclease/phosphatase [Geobacter sp. M18] gi|320124347|gb|ADW11907.1| Endonuclease/exonuclease/phosphatase [Geobacter sp. M18] Length = 346 Score = 62.5 bits (150), Expect = 6e-08, Method: Composition-based stats. Identities = 41/270 (15%), Positives = 80/270 (29%), Gaps = 35/270 (12%) Query: 2 SVVTVATWNVN-SIRARIHNLAAWIKENNPDIICLQE-TKTEDKNFPFETLQSLNYHIET 59 + + V TWN+ R + + ++ + PDI+ Q+ + + ++ Sbjct: 96 ATLRVMTWNIKYGKRDLMPLIEE-LERSRPDIVLFQDAVRAGEGPLVD--------YLSG 146 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +S + S+Y + H + F+ + ++ + + N++ Sbjct: 147 WQLESRGQYLVASRYPISAVEVHALPSRDRKKETFLRCRVRVGSREISLYNVHFKTPRRS 206 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + K +E L+ A + + F Sbjct: 207 LNAFRKAKRGAWYIPKAIDRFEGNVETRLLQAERVA----EYLGRERGDFLVAGDFNSPD 262 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSF--------WDYYADSWSKNKGIRIDHIMLSPE 231 + A + YS+ Y SW +RIDHIM S Sbjct: 263 HSLVCETLRKTGMTDAFAEAGRGYGYSYGHFLLKDRIPYLRASW-----MRIDHIMTSAG 317 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + R+ G + SDH PVI Sbjct: 318 L--RARNCRV-----GTRRASDHRPVIADF 340 >gi|68490863|ref|XP_710758.1| potential DNA repair apurinic/apyrimidinic endonuclease Apn2p [Candida albicans SC5314] gi|68490945|ref|XP_710720.1| potential DNA repair apurinic/apyrimidinic endonuclease Apn2p [Candida albicans SC5314] gi|46431957|gb|EAK91472.1| potential DNA repair apurinic/apyrimidinic endonuclease Apn2p [Candida albicans SC5314] gi|46431999|gb|EAK91510.1| potential DNA repair apurinic/apyrimidinic endonuclease Apn2p [Candida albicans SC5314] Length = 451 Score = 62.5 bits (150), Expect = 6e-08, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 5/63 (7%) Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSPE-ATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +Y+ W+ ++ N G RID I+ S E + +A I G SDH PV Sbjct: 334 KMYTVWNTLTNARQINHGSRIDLILFSDEKMVQRISNADIWPFLMG----SDHCPVFTDC 389 Query: 262 DIP 264 D+ Sbjct: 390 DMS 392 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 18/52 (34%), Gaps = 11/52 (21%) Query: 2 SVVTVATWNVNSIRARI-----------HNLAAWIKENNPDIICLQETKTED 42 S + T+NVN ++ + DII LQE K + Sbjct: 22 STIRYITFNVNGVKTIFNYHPWNQLKNNKDFNTLFNLLQADIITLQELKLTE 73 >gi|238878531|gb|EEQ42169.1| conserved hypothetical protein [Candida albicans WO-1] Length = 451 Score = 62.5 bits (150), Expect = 6e-08, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 5/63 (7%) Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSPE-ATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +Y+ W+ ++ N G RID I+ S E + +A I G SDH PV Sbjct: 336 KMYTVWNTLTNARQINHGSRIDLILFSDEKMVQRISNADIWPFLMG----SDHCPVFTDC 391 Query: 262 DIP 264 D+ Sbjct: 392 DMS 394 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 18/52 (34%), Gaps = 11/52 (21%) Query: 2 SVVTVATWNVNSIRARI-----------HNLAAWIKENNPDIICLQETKTED 42 S + T+NVN ++ + DII LQE K + Sbjct: 22 STIRYITFNVNGVKTIFNYHPWNQLKNNKDFNTLFNLLQADIITLQELKLTE 73 >gi|317151124|ref|XP_001824462.2| DNA lyase [Aspergillus oryzae RIB40] Length = 556 Score = 62.5 bits (150), Expect = 6e-08, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 31/84 (36%), Gaps = 8/84 (9%) Query: 5 TVATWNVNSIRA-------RIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56 + TWNVN IR R A + DI+ LQETK + K+ + + + Sbjct: 4 RITTWNVNGIRNPFAYEPWRGKRTFEAMFEILEADIVVLQETKIQRKDLRDDMVLVPGWD 63 Query: 57 IETCGQKSYNGVAILSKYQPIEIV 80 +S G + + Y Sbjct: 64 CHFSLPRSKKGYSGVVIYTRNATC 87 >gi|228469461|ref|ZP_04054469.1| AP endonuclease domain protein [Porphyromonas uenonis 60-3] gi|228309036|gb|EEK17679.1| AP endonuclease domain protein [Porphyromonas uenonis 60-3] Length = 392 Score = 62.5 bits (150), Expect = 6e-08, Method: Composition-based stats. Identities = 42/249 (16%), Positives = 74/249 (29%), Gaps = 21/249 (8%) Query: 23 AWIKENNPDIICLQE-------TKTEDKNFPFETLQSLNYH-IETCGQKSYNGVAILSKY 74 ++ +++ DIICLQE +K + TL + Y+ + + + +LSKY Sbjct: 156 DYLAKSDADIICLQEAWLSSNKSKYMSERSLRHTLSNYPYYSSAYAVKDHGSRLIVLSKY 215 Query: 75 QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRF 134 + + A F + + + + Sbjct: 216 PILSTRPIDLHSKFNGGAVFTILVGEKKLVLYNLHLESFGFTREEQAHYFQLAQEVNPKG 275 Query: 135 LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDA 194 A A I Q + F + G DA Sbjct: 276 FTQAVGGRFSPAFKRRAQQVEQIYQDINYQESPYLLVCGDFNDTPISYTHHRLSAGLHDA 335 Query: 195 IRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDH 254 I T YS++ + G+RIDH++ S + + A +D SDH Sbjct: 336 IATTG-RGTNYSYY------FKSLIGVRIDHMLYSDQIVARA--AHVDRSV----NISDH 382 Query: 255 TPVIVSLDI 263 P+I + Sbjct: 383 KPIICYFKL 391 >gi|319902450|ref|YP_004162178.1| Endonuclease/exonuclease/phosphatase [Bacteroides helcogenes P 36-108] gi|319417481|gb|ADV44592.1| Endonuclease/exonuclease/phosphatase [Bacteroides helcogenes P 36-108] Length = 360 Score = 62.5 bits (150), Expect = 6e-08, Method: Composition-based stats. Identities = 39/266 (14%), Positives = 82/266 (30%), Gaps = 21/266 (7%) Query: 4 VTVATWNVN---------SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 + +AT+NV S +A +++ D++C QE ++++FP ++++ Sbjct: 104 LKIATYNVQDFGYEVTGYS----CKEIARFMEREGVDVLCFQEFD-DNEDFPMDSIRRAL 158 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 H + + + + + L G + + L Sbjct: 159 SHWPYALIPNDDSIRGVLPMA-VFSRYPLSGHRFITYQGSANCSMMCDIALGTDTIRLLN 217 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 + TS + + + + + + N + + Y + + Sbjct: 218 NHLQTTSVSQKRRKWEREMKADDTRREVHAAKDAAYTLHENFVKRTEQTYIISYYAKHSP 277 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 + + V F L + +R + Y +RID+I SP Sbjct: 278 YPVLVCGDFNSLPSSHTYYHLREFLKDGFRTAGHGYMHTYRYGKGLLRIDYIFHSPTLE- 336 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVS 260 ID SDH PVI+ Sbjct: 337 -----GIDYYSPDLDLCSDHNPVIME 357 >gi|310639778|ref|YP_003944536.1| exodeoxyribonuclease iii rgfb-like protein [Paenibacillus polymyxa SC2] gi|309244728|gb|ADO54295.1| Exodeoxyribonuclease III RgfB-like protein [Paenibacillus polymyxa SC2] Length = 273 Score = 62.5 bits (150), Expect = 6e-08, Method: Composition-based stats. Identities = 40/286 (13%), Positives = 79/286 (27%), Gaps = 39/286 (13%) Query: 4 VTVATWNVNSIRAR--------IHNLAAWIKENNPDIICLQETK--TEDKNFPFETLQSL 53 + + T N + A + LAA+I E D+I LQE E+ + L + Sbjct: 1 MKLLTLNAH---AWMEENQHDKLKQLAAFIDEQQFDVIALQEVNQSLEETPLTPDDLGAY 57 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 Y + + A + + A++ E ++ + Sbjct: 58 -YSADPEVVIKRDNYAYVLNGLLSDAYHWTWAPAHIGFAKYDEGLAILSKTPITATVNEY 116 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 KI I+ + + + Sbjct: 117 ISSMQDYDNYRSRKIVGIQTVVDGVQAWFVSGHYNWWND-------EESFRGLWDRTTEV 169 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG------------- 220 L F + +D + D Y+++ ++ G Sbjct: 170 LDPLAPAPVFVMGDFNNAAEVRGEGYDYVMQSGWSDTYSNAAVRDAGHTVIKAIAGWESN 229 Query: 221 ---IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +RID+I S + + S+ + + SDH V V L++ Sbjct: 230 AEPLRIDYIFSSK--AAQVQSSAVVLNGKTGPVVSDHFGVAVELEL 273 >gi|325285170|ref|YP_004260960.1| Endonuclease/exonuclease/phosphatase [Cellulophaga lytica DSM 7489] gi|324320624|gb|ADY28089.1| Endonuclease/exonuclease/phosphatase [Cellulophaga lytica DSM 7489] Length = 344 Score = 62.5 bits (150), Expect = 6e-08, Method: Composition-based stats. Identities = 38/269 (14%), Positives = 71/269 (26%), Gaps = 37/269 (13%) Query: 4 VTVATWNVNSI--------RARIHNLAAWIKENNPDIICLQE-TKTEDKNFPFETLQSLN 54 +TV T+N +A + ++ + +PDIIC+QE ++ Sbjct: 100 LTVMTYNTRGFNKYEWSSDKALGDKIIDFVLKEDPDIICIQEFSRVRYHQL------KHR 153 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 Y Y + Y I+ A T+R+ NL+L Sbjct: 154 YKYNYVAPGFYVNKVNQAIYSKYPILNTGELPFKLTNNIASFADIAYKNDTIRVYNLHLE 213 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 + + + + Sbjct: 214 SLKVVP----------DMETISNEESSKLYGRITKSFKKQQDQAKIVQEHIKGNPYKTIV 263 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 + + D + ++ Y ++ K +RID I+ S E Sbjct: 264 CGDFNNNQYSNVYRTIKGDLLDTFNEKGSAYG----RTYNF-KYYPVRIDFILASKEF-- 316 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + K SDH PV+ S ++ Sbjct: 317 -----EVIAHKNYDNKLSDHFPVMASFNL 340 >gi|37654244|gb|AAQ96227.1| LRRGT00014 [Rattus norvegicus] Length = 375 Score = 62.5 bits (150), Expect = 6e-08, Method: Composition-based stats. Identities = 46/251 (18%), Positives = 75/251 (29%), Gaps = 32/251 (12%) Query: 6 VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + N+N + + I L WI+ +P CLQET DK+ + ++ + GQK Sbjct: 12 LISLNINGLDSPIKRHRLTNWIRNEDPAFCCLQETHLRDKDRHYLRVKGWKTTFQANGQK 71 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 GVAIL + + + I + Sbjct: 72 KQAGVAILISNKINF--------------QLKVIKKDKEGHFIFIKGKIHQDELSSLNIY 117 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + + + + I GD+N D +D EV Sbjct: 118 APNTRAPTYVKETLLKLKAHIAPHTIIVGDFNTPLSSMDRSWKQKLNSDVDRLREVMSQM 177 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 TD R + Y+F+ ++SK IDHI+ + I Sbjct: 178 ------DLTDIYRTFYPKAKGYTFFSAPHGTFSK-----IDHIIGQKTGLNRYRKIEIIP 226 Query: 244 KPRGWTKPSDH 254 SDH Sbjct: 227 CVL-----SDH 232 >gi|255008060|ref|ZP_05280186.1| putative endonuclease/exonuclease/phosphatase family protein [Bacteroides fragilis 3_1_12] gi|313145777|ref|ZP_07807970.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] gi|313134544|gb|EFR51904.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] Length = 285 Score = 62.5 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 38/276 (13%), Positives = 76/276 (27%), Gaps = 31/276 (11%) Query: 2 SVVTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52 S V +AT+N+ NS + R + +I+E PD++ +QE Sbjct: 25 SHVRLATFNIRYDNPGDSLNSWKYRKDRVCEFIREKQPDVLGMQEV--LHHQLEDLLAGL 82 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTH----LPGDDLDVQARFIEATFTINTQTLRI 108 +Y G++ + + + + + + Sbjct: 83 PDYAYVGVGREDGKTQGEYAPVFYRKDKYDLLDSNTFWLSEHPDSVGKLGWDAACTRVAT 142 Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168 + + R S L +++ AG + + + Sbjct: 143 WAKLKEKSTGKEFLMVNTHFDHVGTEARRNSALLIIDKIKEIAGTHPSMMTGDFNVSEEW 202 Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDY-YADSWSKNKGIRIDHIM 227 + E T Y+F D+ + K ID I Sbjct: 203 EAYKTITSNEFILKDAWKIAAK---------QTGESYTFHDFGRVPVAEREK---IDFIF 250 Query: 228 LSPEATSLLHSARID-TKPRGWTKPSDHTPVIVSLD 262 ++P+ + A I + T SDH + L+ Sbjct: 251 VTPQI--KVADAEIISSAITDSTYLSDHNAHLADLE 284 >gi|315502756|ref|YP_004081643.1| endonuclease/exonuclease/phosphatase [Micromonospora sp. L5] gi|315409375|gb|ADU07492.1| Endonuclease/exonuclease/phosphatase [Micromonospora sp. L5] Length = 265 Score = 62.5 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 39/271 (14%), Positives = 79/271 (29%), Gaps = 19/271 (7%) Query: 3 VVTVATWNVNSIRA---------RIHNLAAWIKENNPDIICLQETKTEDKNFP-FETLQS 52 ++ V TWN IR R + + + PD++ LQE + D Sbjct: 1 MLRVMTWN---IRTGGRDAGGTDRRDRIVSVVTAQRPDVLALQELRGMDATLGGLAGRLG 57 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 + ++ V + P+ ++ A T Sbjct: 58 MTPYLARSCFGQPVAVLVR---PPLRVLRAGRVRRPFHHAAARVQVATGAGPLTVFSTHL 114 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 P+ + D + ++R + L D+ Sbjct: 115 NPYSGGRRRMEADWLAAALRRTGGELALLAGDLNTLEPTADHTARLAGLATPYRRRHLRR 174 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 T++ R + L R+ D + + + G+R+D+++ SP Sbjct: 175 DGRTVDTRAVARLLDAGLVDLWPRSGGDEPGGLTVPTRHGGAEF--AGMRLDYLLASPAL 232 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + + R + SDH PV+ +D+ Sbjct: 233 ADRVRAVR-VVRDGDADSASDHYPVLAEVDL 262 >gi|103487806|ref|YP_617367.1| endonuclease/exonuclease/phosphatase [Sphingopyxis alaskensis RB2256] gi|98977883|gb|ABF54034.1| Endonuclease/exonuclease/phosphatase [Sphingopyxis alaskensis RB2256] Length = 231 Score = 62.5 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 37/270 (13%), Positives = 65/270 (24%), Gaps = 53/270 (19%) Query: 3 VVTVATWNVN-SI---RARIHN-LAAWIKENNPDIICLQE------TKTEDKNFPFETLQ 51 ++ VA++N+ I R R + A ++E + DI+ LQE T+ P + Sbjct: 1 MIKVASYNMRKGIGLDRRRDPGRVLAVLRELDADIVALQEADRRFGTRASA--IPPHMFE 58 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 + AI + + ++ T+RIG+ Sbjct: 59 E-HSDYVPVDLLHGRPYAIGWHGNALLVRKGAEVEESHALHLPTLEPRGAVAATVRIGDT 117 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 L + + L P I Sbjct: 118 RLRVVGMHLDISGLRRRQQARAILH---------------------HIAEGEKLPTILMG 156 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 D + SF + +D I SP+ Sbjct: 157 DCNEWRQTGGCLADFGAEHRLVDTGH--------SFHSRRPVAK-------LDRIFASPD 201 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 A + + SDH P+ Sbjct: 202 LDP--VDAGVHRSALAA-RASDHLPIWARF 228 >gi|73490255|dbj|BAE19808.1| bucentaur [Muntiacus reevesi] Length = 516 Score = 62.5 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 38/291 (13%), Positives = 73/291 (25%), Gaps = 37/291 (12%) Query: 6 VATWNVNSIRARIHNLAAWIKEN----NPDIICLQETKTE-DKNFPFETLQSLNYHIETC 60 + TWNV S+ +K+ N DI+ + E K + H Sbjct: 247 IGTWNVRSMN---PGKLDVVKQEMERINIDILGISELKWTGMGELNSDD------HYIYY 297 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + ++ + + G +L I Sbjct: 298 CGQQSLRRNGVALIVNKRVRNAIIGCNLKNDRMISVRFQGKPFNLTVIQVYAPTPYAEEG 357 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + + L + IP + + +E Sbjct: 358 EVYRFYEDLQHLLEITPKIDVLFIIGDWNAKVGSQEIPGITGRFGLGMQNEAGRRLIEFC 417 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 N + LY++ + ID+I+ S + SA+ Sbjct: 418 H-----HNRLVITNTLFQQPSRRLYTWTSPDGRYRDQ-----IDYIICRQRWRSSVQSAK 467 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI----------PEPRKKQQDSTSQNMKPI 281 G SDH +I + P ++D+T+++ K I Sbjct: 468 TRP---GADCGSDHKLLIAKFRLKLKIIPKTTRPFRVTNEEDATNEDAKSI 515 >gi|147786908|emb|CAN62318.1| hypothetical protein VITISV_026527 [Vitis vinifera] Length = 1141 Score = 62.5 bits (150), Expect = 7e-08, Method: Composition-based stats. Identities = 41/263 (15%), Positives = 79/263 (30%), Gaps = 39/263 (14%) Query: 4 VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + +WNV + +R + +++ NPD++ +QETK +N + S Sbjct: 1 MKIISWNVRGLGSRNKRRMVKDFLRSENPDVVMIQETK--KENCDRRFVGS------VWT 52 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 ++ + VA+ I+ +L + I + +L + Sbjct: 53 VRNKDWVALPVSGASGGILIIWDSKNLRREEVVIGSFSISVKFSLDGCGPLWISAVYGPN 112 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + K W++ F + L F + + F E Sbjct: 113 SPSLRKDFWVELFDIYGLTYLLWCVGGDFNVIRRSSEKLGGSSLTPSMRDFDSFIRECEL 172 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT----SLLH 237 L+N FT + R+D + S E L Sbjct: 173 LDPPLRNASFTWSNMQESPVCK------------------RLDRFLYSNEWGLLFPQGLQ 214 Query: 238 SARIDTKPRGWTKPSDHTPVIVS 260 A I + SDH P+++ Sbjct: 215 EALI-------RRTSDHWPIVMD 230 >gi|182417077|ref|ZP_02948455.1| endonuclease/exonuclease/phosphatase family protein [Clostridium butyricum 5521] gi|237667663|ref|ZP_04527647.1| endonuclease/exonuclease/phosphatase [Clostridium butyricum E4 str. BoNT E BL5262] gi|182379086|gb|EDT76590.1| endonuclease/exonuclease/phosphatase family protein [Clostridium butyricum 5521] gi|237656011|gb|EEP53567.1| endonuclease/exonuclease/phosphatase [Clostridium butyricum E4 str. BoNT E BL5262] Length = 258 Score = 62.1 bits (149), Expect = 7e-08, Method: Composition-based stats. Identities = 39/269 (14%), Positives = 80/269 (29%), Gaps = 21/269 (7%) Query: 4 VTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 + V T+N+ N + R H I + DII QE + + S N Sbjct: 1 MKVMTFNLRCDFPLDINNRWKNRRHITYNIIDKYKCDIIGTQE--ATENMYKDIKKNSDN 58 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 Y+I + + I I + +++ + Sbjct: 59 YNII----GTPRSRKFFVERNDILIKNENKIIESKTFWLSDTPDTVGSSKWFSVFPRICT 114 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 S K ++ + E E + + + N Sbjct: 115 TAVIELSNKVKIRVCNSHLDCFTSKA-REYELKRLMELIEEEQIKEDLPIIIMGDFNSGP 173 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 + ++ + A++ ++ S + K KG+ ID+I +S E Sbjct: 174 DSKLIKNLSSGVYGSKKVSAVQEYDKRLYMNSTMSMFKG---KEKGLHIDYIFVSEEF-- 228 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +++ I PSDH P++ +++ Sbjct: 229 KVNNVEIVRYNENGKYPSDHYPLMAEIEL 257 >gi|222054058|ref|YP_002536420.1| Endonuclease/exonuclease/phosphatase [Geobacter sp. FRC-32] gi|221563347|gb|ACM19319.1| Endonuclease/exonuclease/phosphatase [Geobacter sp. FRC-32] Length = 258 Score = 62.1 bits (149), Expect = 7e-08, Method: Composition-based stats. Identities = 47/280 (16%), Positives = 89/280 (31%), Gaps = 61/280 (21%) Query: 6 VATWNVNS----------IRARIHNLAAWIKENNPDIICLQE-----TKT----EDKNFP 46 V T+NV+S +R +A I +PDI+ LQE T++ + Sbjct: 19 VMTYNVHSCIGMDGKVSPLR-----IAEVIAHYDPDIVALQELDAGLTRSDLVDQAHLIA 73 Query: 47 FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIE--ATFTINTQ 104 S ++H ++ G AILS++ + + + + Sbjct: 74 KSLEMSYHFHSSIQVEEGEYGNAILSRFPIHLVKGGALPTHPVNKNLERRGAVWAEVELK 133 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 +R+ + G + + P+I GD+N +P Sbjct: 134 GIRVQVVATHLGLNRR----ERMCQANALSGPDWLGHPDCRPPVILCGDFNALPGSFVYR 189 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRID 224 + I +DA +K + +RID Sbjct: 190 HFIRSLHDA---------HRKGRGRRLKGTWPVRLPL-------------------MRID 221 Query: 225 HIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 ++ ++P+ T SA P SDH P++ +L++ Sbjct: 222 YLFVTPDITVRRISA--HRTPLTMA-ASDHLPLVAALELS 258 >gi|326664783|ref|XP_003197885.1| PREDICTED: transposon TX1 uncharacterized 149 kDa protein-like [Danio rerio] Length = 1148 Score = 62.1 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 44/266 (16%), Positives = 87/266 (32%), Gaps = 33/266 (12%) Query: 1 MSVVTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 M+ +T++T NV S+R+ R ++ +++K D+ LQE PF NY Sbjct: 10 MA-LTISTINVRSVRSPIRAQSVLSFLKLLKSDVFLLQEC-----ALPF----ISNYRKW 59 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + S + + + T + + + +L Sbjct: 60 EDVWTPGPSLWSGSNQNKND---GVAILINNPNILVKGTTVVRDGRAFLVTLTFLGRDFN 116 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + + + L + + PL+ AGD+N I D + Sbjct: 117 VLNIYGHTDKNERYELLEDLQPHMLGKPPLVVAGDFNCILTQKDRKKADFKLDKT----- 171 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 +++ D R H ++++ + S RID+I + + + Sbjct: 172 STLLNHLVKDFKLVDCFRQVHPREEGFTWFSSDSTS-----ASRIDYIF-TRDFPPV--- 222 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIP 264 T SDHT + +L +P Sbjct: 223 ----DATLTPTFFSDHTILSCTLSLP 244 >gi|326664774|ref|XP_003197881.1| PREDICTED: transposon TX1 uncharacterized 149 kDa protein-like [Danio rerio] Length = 1149 Score = 62.1 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 44/266 (16%), Positives = 87/266 (32%), Gaps = 33/266 (12%) Query: 1 MSVVTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 M+ +T++T NV S+R+ R ++ +++K D+ LQE PF NY Sbjct: 10 MA-LTISTINVRSVRSPIRAQSVLSFLKLLKSDVFLLQEC-----ALPF----ISNYRKW 59 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + S + + + T + + + +L Sbjct: 60 EDVWTPGPSLWSGSNQNKND---GVAILINNPNILVKGTTVVRDGRAFLVTLTFLGRDFN 116 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + + + L + + PL+ AGD+N I D + Sbjct: 117 VLNIYGHTDKNERYELLEDLQPHMLGKPPLVVAGDFNCILTQKDRKKADFKLDKT----- 171 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 +++ D R H ++++ + S RID+I + + + Sbjct: 172 STLLNHLVKDFKLVDCFRQVHPREEGFTWFSSDSTS-----ASRIDYIF-TRDFPPV--- 222 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIP 264 T SDHT + +L +P Sbjct: 223 ----DATLTPTFFSDHTILSCTLSLP 244 >gi|21357231|ref|NP_647790.1| CG12034 [Drosophila melanogaster] gi|32172461|sp|Q9VZS6|NSMA_DROME RecName: Full=Putative neutral sphingomyelinase gi|15291739|gb|AAK93138.1| LD24865p [Drosophila melanogaster] gi|23092890|gb|AAF47741.2| CG12034 [Drosophila melanogaster] gi|220944946|gb|ACL85016.1| CG12034-PA [synthetic construct] gi|220954776|gb|ACL89931.1| CG12034-PA [synthetic construct] Length = 442 Score = 62.1 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 46/296 (15%), Positives = 84/296 (28%), Gaps = 52/296 (17%) Query: 10 NVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDK----NFPFETLQSLNYHIE 58 N+ I R RI + + DI+ LQE ++ E + +++ Sbjct: 12 NIWGIPYVSSDRRPRIDAICKELASGKYDIVSLQEVWAQEDSELLQKGTEAVLPHSHYFH 71 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIE--------ATFTINTQTLRIGN 110 + + V + Q + + N Sbjct: 72 SGVMGAGLLVLSKYPILGTLFHAWSVNGYFHRIQHADWFGGKGVGLCRILVGGQMVHLYN 131 Query: 111 LY-LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 + + ++ +F I AGD N PQ + Sbjct: 132 AHLHAEYDNANDEYKTHRVIQAFDTAQFIEATRGNSALQILAGDLNAQPQDISYKVLLYT 191 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN-KGIRIDHIML 228 + + +D+ R H+ Y+ + +N GIRIDHI + Sbjct: 192 SK--------------MLDSCDSDSFRTNECEHNSYT----SKQARERNPLGIRIDHIFV 233 Query: 229 SPEATSLLHSARI--------DTKPRGWTKPSDHTPVIVSLDI--PEPRKKQQDST 274 + +A I + P SDH V+ L + EPR ++ +T Sbjct: 234 RGG--DHV-NAEIAEYKLPFPERVPGEKFSFSDHEAVMAKLKLFKLEPRSEEPVAT 286 >gi|242208449|ref|XP_002470075.1| predicted protein [Postia placenta Mad-698-R] gi|220730827|gb|EED84678.1| predicted protein [Postia placenta Mad-698-R] Length = 1134 Score = 62.1 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 43/314 (13%), Positives = 87/314 (27%), Gaps = 55/314 (17%) Query: 5 TVATWNV-------N-------------SIRARIHNLAAWIKENN-PDIICLQETKTEDK 43 + +WNV N +R+ L I ++ PD +CLQE + Sbjct: 824 RILSWNVETPVPFLNLPPRKVGTSSVPPG--SRLSLLRELIARHDFPDFVCLQEVRAR-- 879 Query: 44 NFPFETLQSLN--------------YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLD 89 E + +L Y + +++ + + D D Sbjct: 880 QSDKEWIVALKAAANKSDSGPKYTAYMSLNRALRGPRHFGVITYVKDAHKIAVSREVDWD 939 Query: 90 VQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLI 149 + R I L + L + + +R F ++ + + Sbjct: 940 AEGRVIILEMKSGWALLNVYALNGSEYFWRDPLGQNAPKTRNERKRDFNRLLMQECQAMR 999 Query: 150 FAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT------DAIRATHDTHH 203 G ++ + T +K N F D R H Sbjct: 1000 ARGLRLVLIGDFNISLTKKDCVPRLRTEYPHSLARKEFNEEFIPTLDVVDVYREVHGQKA 1059 Query: 204 LYSFWDYYADSWSKNKGI---RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 +S++ K +G R+D+ ++ + SDH P+ ++ Sbjct: 1060 AFSWF-----VKGKPQGADAARVDYALVQRTLMDRVIETMYHEDS-VERAHSDHAPLTLA 1113 Query: 261 L-DIPEPRKKQQDS 273 L D+ ++ Sbjct: 1114 LRDMDGLEEENDTV 1127 >gi|326678664|ref|XP_003201132.1| PREDICTED: transposon TX1 uncharacterized 149 kDa protein-like [Danio rerio] Length = 1102 Score = 62.1 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 38/265 (14%), Positives = 86/265 (32%), Gaps = 26/265 (9%) Query: 1 MSVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 M + V + N+N R R ++ +++ ++ LQET ++ N E + + + Sbjct: 27 MEQLRVGSLNINGGRDRKKLAVISEFLELKKINVAFLQETHSDCDN---EIEWDMWWGGK 83 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 N A ++ + ++ + R + I N+Y P+ Sbjct: 84 LFLSHGSNNSAGVAILISKNLNANILLVKEIEKGRILYTKIEIEGFLFGFINVYAPNNGS 143 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + + L + +E ++ GD+N + + Sbjct: 144 ERVSFFM--------KLNEFLKGVEEGVCIVLGGDWNC-----TTDFTVDRNGEEPHNQS 190 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 + ++ G D R + Y++ + G R+D + + + Sbjct: 191 SIVLSRIMKKNGLVDIWRLRNKEERQYTWVKVTDNMV---HGARLDRFYVGQIWNNRVIK 247 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263 A I T SDH + + L++ Sbjct: 248 AFI-----SPTAFSDHHMIGLELNM 267 >gi|320535908|ref|ZP_08035979.1| endonuclease/exonuclease/phosphatase family protein [Treponema phagedenis F0421] gi|320147245|gb|EFW38790.1| endonuclease/exonuclease/phosphatase family protein [Treponema phagedenis F0421] Length = 255 Score = 62.1 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 41/266 (15%), Positives = 76/266 (28%), Gaps = 24/266 (9%) Query: 4 VTVATWNV------NSIRA---RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 + + T+N+ + A R N+ I + PDII QE + E Sbjct: 1 MKIVTFNIRYDNPDDGKNAFIHRKSNIIEAINAHKPDIIGFQEVLPHVSAWLKEQFPEYY 60 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 + + + +L + + H L + + +T + RI + Sbjct: 61 FIGHGRSENFSDEHIVLGYKKMDYQLHHFRTFWLSPTPQVPGSRYTEQSICPRICIHAIF 120 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 + S L ++ D + +P + N Sbjct: 121 ETDR------HRLFSVYNTHLDHEGVDARVKALQQIMQDIDSFSKPTLPTVLMGDFNAKP 174 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E+ + + SF D+ + K ID+I +PE Sbjct: 175 TDEELHVLKEFKIKENDKNLQLNDLTKDIRGSFHDFGNCTPEK-----IDYIFATPEFL- 228 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVS 260 L + + G SDH P+ V Sbjct: 229 -LQNYSVWENKAG--FLSDHYPLEVE 251 >gi|300774457|ref|ZP_07084320.1| AP endonuclease domain protein [Chryseobacterium gleum ATCC 35910] gi|300506272|gb|EFK37407.1| AP endonuclease domain protein [Chryseobacterium gleum ATCC 35910] Length = 261 Score = 62.1 bits (149), Expect = 8e-08, Method: Composition-based stats. Identities = 42/263 (15%), Positives = 79/263 (30%), Gaps = 37/263 (14%) Query: 4 VTVATWNVNSIRARI-----HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 + V ++N R + ++K + D+ LQE + YH + Sbjct: 26 IKVVSFN-----TRAGGRGNEGVGPYLKSQDADVFLLQE------------DAGIKYHFD 68 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + + G + I + D DV+ + A I +T R ++YL Sbjct: 69 GYQKANPGGGLTILTKHKIIKQQIIDPQDEDVRIPGVLADIEIKGRTYRFIDVYLNPFRF 128 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + + + + +I + + + ++ Sbjct: 129 EKDMVKLNGDTDTDEQKIKDVIKRLIPTFKKHQDQVALIREAIENSPYPVILAGDFNSVP 188 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 + L + + A + SF DY IRID++ S S Sbjct: 189 NSYEYYHLSDGLEDTFLTAGKGSAT--SFHDYKFP-------IRIDYVFSSKSL--KAIS 237 Query: 239 ARIDTKPRGWTKPSDHTPVIVSL 261 ++D SDH PVIV Sbjct: 238 YKVDRSV----SISDHYPVIVKF 256 >gi|298293932|ref|YP_003695871.1| endonuclease/exonuclease/phosphatase [Starkeya novella DSM 506] gi|296930443|gb|ADH91252.1| Endonuclease/exonuclease/phosphatase [Starkeya novella DSM 506] Length = 269 Score = 62.1 bits (149), Expect = 9e-08, Method: Composition-based stats. Identities = 42/273 (15%), Positives = 80/273 (29%), Gaps = 59/273 (21%) Query: 4 VTVATWNVNS-----IRARIHNLAAWIKENNPDIICLQETKTEDKNFP-FETLQSLNYHI 57 + + TWN++ R + +A+ + ++ PD++ LQE T ++ L+ L+ H Sbjct: 10 LRLMTWNIHGGIGPDRRFDLDRIASLVAKHAPDVLALQEIDTRGRDIDCLAPLRGLDIHH 69 Query: 58 E-----TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 + G A+ S++ ++V H IE L + ++ Sbjct: 70 FTEARTIAVPDGHYGHALFSRWPTSDVVLHDLSVWRYEPRIAIETQIATPFGPLHLVAVH 129 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 G I + + + + + + + Sbjct: 130 --LGLFIFERRRQAGMLAAMARRVRGMPTVMMGDFNDWFSFGQVT--------------- 172 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 R L A +R+D + S Sbjct: 173 -------RTMSHVLPERTRLRTFPAQKPA-------------------LRLDRVYCSAP- 205 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 +L A D R SDH P+IV L +P Sbjct: 206 -GMLADAFTDPAARAI---SDHLPIIVDLALPA 234 >gi|262405075|ref|ZP_06081625.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294643581|ref|ZP_06721385.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CC 2a] gi|294808680|ref|ZP_06767414.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides xylanisolvens SD CC 1b] gi|262355950|gb|EEZ05040.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|292641076|gb|EFF59290.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CC 2a] gi|294444119|gb|EFG12852.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides xylanisolvens SD CC 1b] Length = 316 Score = 62.1 bits (149), Expect = 9e-08, Method: Composition-based stats. Identities = 46/302 (15%), Positives = 87/302 (28%), Gaps = 45/302 (14%) Query: 2 SVVTVATWNV-----------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETL 50 + +TVA++N+ N R +A ++ ++ DI QE E L Sbjct: 26 TSITVASYNLRNANGGDSINGNGWGQRYPVIAQIVQYHDFDIFGTQECFIHQLKDIKEAL 85 Query: 51 QSLNY-HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 +Y + K + + V L + + Sbjct: 86 PGYDYIGVGRDDGKEKGEHSAIFYRTDKFDVIEKGDFWLSKTPDVPSKGWDAVLPRICSW 145 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 + ++ + I + R S L ++ + Sbjct: 146 GHFKCKDTGFEFLFFNLHMDHIGKKARVESAFLVQDKMKELGKGKELP----AILTGDFN 201 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 + + + S L + R + +F D+ +S+++ RIDHI +S Sbjct: 202 VDQTHQSYDAFVSKGVLCDSYEKAGFRYAING----TFNDFDPNSFTE---SRIDHIFVS 254 Query: 230 PEA--------------------TSLLHSA--RIDTKPRGWTKPSDHTPVIVSLDIPEPR 267 P + ID K PSDH PV V L+ + + Sbjct: 255 PSFQVKRYGVLTDTYRSIVGKGEKKQANDCPEEIDIKTYQARTPSDHFPVKVELEFDQRQ 314 Query: 268 KK 269 +K Sbjct: 315 QK 316 >gi|307180084|gb|EFN68152.1| Putative neutral sphingomyelinase [Camponotus floridanus] Length = 360 Score = 62.1 bits (149), Expect = 9e-08, Method: Composition-based stats. Identities = 46/277 (16%), Positives = 82/277 (29%), Gaps = 30/277 (10%) Query: 6 VATWNVNSI----RARIHNLAAWIKE---NNPDIICLQETKTEDK--NFPFETLQSLNYH 56 + T N I + RI ++A ++ DIICLQE + + + + L Y Sbjct: 9 ILTLNCWGIPYVSKNRITRMSAIAEKCASREYDIICLQEVWSVEDFKVIKAKVQEILPYS 68 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT---QTLRIGNLYL 113 +GV ILS+Y +++ H + V F ++I N+ + Sbjct: 69 HYFYSGVVGSGVCILSRYPIYDVMFHKWPLNGYVHKIHHGDWFGGKGVGLCKIKILNMNI 128 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 +Y+ + + + G +I P Sbjct: 129 NVYTAHLHAEYNRENDEYMAHRVLQAFDTAQFVRMTSGGADAVILAGDLNTEPQDLAYRI 188 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 + A + Y+ + ++ G RIDHI+ Sbjct: 189 IRGVGGLMDACPSSASHIGTNECANN----SYTC---SKFARTRPDGKRIDHILY---LG 238 Query: 234 SLLHSARI--------DTKPRGWTKPSDHTPVIVSLD 262 S I + P SDH V+ +L Sbjct: 239 SKSVKVEITNFQHPLPNRVPYKDFSYSDHEAVMATLK 275 >gi|281424726|ref|ZP_06255639.1| AP endonuclease domain protein [Prevotella oris F0302] gi|281401096|gb|EFB31927.1| AP endonuclease domain protein [Prevotella oris F0302] Length = 363 Score = 62.1 bits (149), Expect = 9e-08, Method: Composition-based stats. Identities = 37/267 (13%), Positives = 74/267 (27%), Gaps = 23/267 (8%) Query: 4 VTVATWNVNSIRARIHN------LAAWIKENNPDIICLQETKTED-KNFPFETLQSLNYH 56 + V ++NV S + + +I+E DI+CLQE T + +++ + Y Sbjct: 101 IKVMSYNVWSFAGWERHADGKFPILEYIREQQADILCLQEAMTNEIGQARVDSVLNKIYA 160 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 + + S + I + + N + + N G Sbjct: 161 YKDTMKFSPSSDCIALYSRYPIVSHERIVYPSRGNLSGAFEIKIGNDTVIVVNNHLETTG 220 Query: 117 --NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 N + + +++ + + Y + Sbjct: 221 LSNEDKREFKSMVKGNLLTSDAKQASYRLIDKLGEASAKRAVQADAVARYISKHSDRSMI 280 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI--RIDHIMLSPEA 232 + S + Y+ N G+ RIDHIM S + Sbjct: 281 VCGDFNDSPISYARHTIAKGLTDCFIATGNGLGVSYH------NGGMYVRIDHIMCSKDW 334 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIV 259 ++D SDH P++ Sbjct: 335 QPY--GCKVDRSI----GESDHYPILC 355 >gi|254445739|ref|ZP_05059215.1| endonuclease/exonuclease/phosphatase family [Verrucomicrobiae bacterium DG1235] gi|198260047|gb|EDY84355.1| endonuclease/exonuclease/phosphatase family [Verrucomicrobiae bacterium DG1235] Length = 278 Score = 62.1 bits (149), Expect = 9e-08, Method: Composition-based stats. Identities = 36/270 (13%), Positives = 75/270 (27%), Gaps = 33/270 (12%) Query: 4 VTVATWNVNSIRA------------RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51 +T++T+N +R R +A I PDI+ +QE + + Sbjct: 22 LTLSTYN---LRLEIASDGPNQWENRREQVANQIAFLAPDILGVQE--ALPQQVDYLEQN 76 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 Y G+ S + LD ++ T + + Sbjct: 77 LAGYSYIGVGRHDGIRAGEHSAIYY----RDSTTELLDSSTFWLSPTPDTPSYGWGVHYR 132 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 + + L + + P++ + + N Sbjct: 133 RICTYGHFRDRQTKTTYWVFNTHFDHEMPEARLNGAKLILDRIATLVSPNEPHFLMGDLN 192 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG--IRIDHIMLS 229 + ++ KLQ+ +++ RID+I S Sbjct: 193 ATPDSPPIKLISAKLQDTRLHSTGPVFGSEGT--------FNAFDPTTIPTRRIDYIFAS 244 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 PE + + + + PSDH P+++ Sbjct: 245 PE--NTITAYATLSDLIDGRYPSDHFPIVI 272 >gi|241206881|ref|YP_002977977.1| endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860771|gb|ACS58438.1| Endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 288 Score = 61.7 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 47/301 (15%), Positives = 95/301 (31%), Gaps = 58/301 (19%) Query: 4 VTVATWNVN---SIRARIHNLAAWIKE--NNPDIICLQETKTEDKNFPFETLQSL----- 53 + A++N+ + R A I D+I LQE + F + Sbjct: 1 MNFASYNIQYGFGLDGRYD--LARIARSLEGADVIALQEV---TRGFSRNGFADMAADVA 55 Query: 54 ----NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 +Y + A +QP+ G+ + + + + ++ IG Sbjct: 56 AFFPDYFWVYGPACDMHVEADEGGFQPVRGTRFQFGNMVLSRWPVVSTRTLLLPRSRTIG 115 Query: 110 NLYLPHGN-----------------PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG 152 + L G + D++I ++ + ++ L G Sbjct: 116 KINLQRGATEAVIDAPGAAIRVYSVHLDHVSADERIRQLEFLNAHINAFVQEGGSLTGGG 175 Query: 153 DYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHD----------TH 202 ++++ P I+ + + + + R + Sbjct: 176 EFDLPEPPLPEDYVIMGDFNMEPESPEYCALAGAGGGYYGRVARIGTPVDAFAALEAYSP 235 Query: 203 HLYSFWDYYADSWSKNKGIR--IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 YS+ D ++ G R +D+ +S S L SARIDT+ + SDH P+ V Sbjct: 236 ESYSWMD------PEDHGKRMHLDYCFVSCGLQSRLKSARIDTQ----SVASDHFPLWVE 285 Query: 261 L 261 + Sbjct: 286 I 286 >gi|229824863|ref|ZP_04450932.1| hypothetical protein GCWU000182_00212 [Abiotrophia defectiva ATCC 49176] gi|229790866|gb|EEP26980.1| hypothetical protein GCWU000182_00212 [Abiotrophia defectiva ATCC 49176] Length = 258 Score = 61.7 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 41/275 (14%), Positives = 74/275 (26%), Gaps = 35/275 (12%) Query: 1 MSVVTVATWNV------NSIRA---RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51 M + + T+N+ + I R + + PDIIC QE P Sbjct: 1 MGDIKLVTFNIRCDYEQDGINNFAFRKPLIVDKVNSTQPDIICFQEV------LP----- 49 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT-QTLRIGN 110 H+ + ++ I+ + + + T +T I Sbjct: 50 ----HVAVWLKATFTDYYIVGCGRSEDFADEQEAIAFKKDRFNLVNMSTFWMSETPYIPG 105 Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170 + + + I F L+ A + II+ Sbjct: 106 SRYKKQSTCPRVTTEVVLYDIAEKNMFRLLNTHLDHEGSEARLLGLNQLLKKIDEEIIFP 165 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL--YSFWDYYADSWSKNKGIRIDHIML 228 + + M +D ++F DY + K ID+I + Sbjct: 166 DIPVIIAGDFNAEPDSPEMQAVITSEKYYDLTAGIDFTFHDY-GKTKEK-----IDYIFV 219 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 S T + SDH P+ V + I Sbjct: 220 SRNIT--CKKTEKWDDVKNGVYISDHYPIQVDISI 252 >gi|162453061|ref|YP_001615428.1| hypothetical protein sce4785 [Sorangium cellulosum 'So ce 56'] gi|161163643|emb|CAN94948.1| probable secreted protein [Sorangium cellulosum 'So ce 56'] Length = 286 Score = 61.7 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 38/275 (13%), Positives = 77/275 (28%), Gaps = 25/275 (9%) Query: 2 SVVTVATWNV-NSIR-----ARIHNLAAWIKENNPDIICLQETKTEDK-NFPFETLQSLN 54 S + V T N+ N R AR+ + ++E +PD++ LQE + + + L Sbjct: 24 SSLRVLTLNIWN--RHDPWEARLEVIREGLRELDPDVVGLQEVLSYEGRSLADGIADGLG 81 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 Y + G + E + Sbjct: 82 YEVAFGAAHDLGGGVLFGNAVLSRWPIARSQAFPLPTGETDEKRSIL----------LAE 131 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 G+P + + K + I + + P + +A Sbjct: 132 LGSPHGAIPFFVTHLNWKFHHGAVREAQVAAVADIVMREAPMEGLPPIVVGDFNAQPEAT 191 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYY--ADSWSKNKGIRIDHIML-SPE 231 ++ Q + ++F + + RID++ + P+ Sbjct: 192 EIRFMKGLHALNQKSVYFADTFDQTGKGPGFTFDPVRNPFAAITNEYPRRIDYVFVRGPD 251 Query: 232 ATSL---LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 A L S + + R SDH V+ + + Sbjct: 252 AQGRGKPLSSRVVFEEIRNGVAASDHYGVLSEISM 286 >gi|32306454|dbj|BAC78521.1| Bcnt [Giraffa camelopardalis] Length = 378 Score = 61.7 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 38/291 (13%), Positives = 72/291 (24%), Gaps = 37/291 (12%) Query: 6 VATWNVNSIRARIHNLAAWIKEN----NPDIICLQETKTE-DKNFPFETLQSLNYHIETC 60 + TWNV S+ +K+ N DI+ + E K + H Sbjct: 101 IGTWNVRSMN---PGKLDVVKQEMERINIDILGISELKWTGMGELNSDD------HYIYY 151 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + ++ + + G +L I Sbjct: 152 CGQQSLRRNGVALIVNKRVRNAIIGCNLKNDRMISVRFQGKPFNLTVIQVYAPTPYAEEG 211 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + + L + IP + + +E Sbjct: 212 EVYRFYEDLQHLLEITPKIDVLFIIGDWNAKVGSQEIPGITGRFGLGMQNEAGRRLIEFC 271 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 N + LY++ + ID+I+ S + SA+ Sbjct: 272 H-----HNRLVITNTLFQQPSRRLYTWTSPDGRYRDQ-----IDYIICRQRWRSSVQSAK 321 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI----------PEPRKKQQDSTSQNMKPI 281 G SDH +I + P ++D+T++ K I Sbjct: 322 TRP---GADCGSDHKLLIAKFRLKLKIIPKTTRPFRVTNEEDATNEETKSI 369 >gi|269865178|ref|XP_002651832.1| exodeoxyribonuclease III [Enterocytozoon bieneusi H348] gi|220063793|gb|EED42224.1| exodeoxyribonuclease III [Enterocytozoon bieneusi H348] Length = 298 Score = 61.7 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 40/298 (13%), Positives = 79/298 (26%), Gaps = 58/298 (19%) Query: 3 VVTVATWNVNSIRARIH----NLAAWIKENNPDIICLQETKTED----KNFPFETL---- 50 +V + NVN IR+ W+ DI C QE + + F + Sbjct: 1 MVKIFCLNVNGIRSFEKFHKIPFNNWLLGLGYDIYCFQEIRGNEVSLRYLFTLDDFCTFA 60 Query: 51 ---------------QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFI 95 + NY T + + + + D + + Sbjct: 61 SFHSRAGRHGVATLVRKDNYCCATEEVRKGRILKTIHSNFVLYNCYMPYCSDESLIEAVM 120 Query: 96 EATFTINT------QTLRI--------GNLYLPHGNPITSTKYDDKISWIKRFLRFASQR 141 E + + I ++ + + W + Sbjct: 121 ETYDKLTDVLNKEQHPVVILCGDMNATYSMCDNYLYMREYEQLHYVSEWSMSIDHISKVE 180 Query: 142 LELEEPLIFAGDYNIIPQ-----------------PHDCYNPIIWENDACFTLEVRQSFQ 184 ++ + D+ + Q Y ++ F + ++ + Sbjct: 181 NPIQRGKLHTRDFYMKLQMSSENGIYTEKVAPRIDELPVYFLTKYDLYDHFMEKRQRQWL 240 Query: 185 KLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F D R + Y+ WD N G RID+I+L + + SA+ D Sbjct: 241 ANLMKTFVDTFRIGNKELFQYTCWDRVLRHRESNLGTRIDYILLKTTSHYKIKSAKSD 298 >gi|283778620|ref|YP_003369375.1| endonuclease/exonuclease/phosphatase [Pirellula staleyi DSM 6068] gi|283437073|gb|ADB15515.1| Endonuclease/exonuclease/phosphatase [Pirellula staleyi DSM 6068] Length = 309 Score = 61.7 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 36/263 (13%), Positives = 73/263 (27%), Gaps = 34/263 (12%) Query: 25 IKENNPDIICLQETKTEDKNFPFETL---QSLN----YHIETCGQKSYNGVAILSKYQPI 77 IKE N DII QE +N Q L Y + + + ++ Sbjct: 57 IKEANADIIAFQEV----ENLDVLKRFRNQYLGGFKSYPHAVLIEGNDPRLIDVAVLSRE 112 Query: 78 EIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF 137 + V+A F + L + + + + Sbjct: 113 KFPIVSTRSHHHVKANATSRGFVFSRDCLEVDIEVGSQTLTLFVNHLK-SMMGGRDQTHE 171 Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA 197 + + + P + + + + L + + Sbjct: 172 RRKLQSTWVKKLVNQRFGTDPGNNPFIVLGDLNDYLDSASDPDSGIRNLVKWNQVENVIE 231 Query: 198 THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI-----------DTKPR 246 ++ Y+ N+ ++D++++S +S + S I T PR Sbjct: 232 RLPAAERWTH--YWNGG---NEYRQLDYLLVSKSLSSAVQSVEIIRGGLPTRATNYTGPR 286 Query: 247 ------GWTKPSDHTPVIVSLDI 263 K SDH P++V L + Sbjct: 287 FPGVGTNDPKASDHCPIVVELKL 309 >gi|237715231|ref|ZP_04545712.1| conserved hypothetical protein [Bacteroides sp. D1] gi|237719602|ref|ZP_04550083.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|229444540|gb|EEO50331.1| conserved hypothetical protein [Bacteroides sp. D1] gi|229450871|gb|EEO56662.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] Length = 314 Score = 61.7 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 46/302 (15%), Positives = 87/302 (28%), Gaps = 45/302 (14%) Query: 2 SVVTVATWNV-----------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETL 50 + +TVA++N+ N R +A ++ ++ DI QE E L Sbjct: 24 TSITVASYNLRNANGGDSINGNGWGQRYPVIAQIVQYHDFDIFGTQECFIHQLKDIKEAL 83 Query: 51 QSLNY-HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 +Y + K + + V L + + Sbjct: 84 PGYDYIGVGRDDGKEKGEHSAIFYRTDKFDVIEKGDFWLSKTPDVPSKGWDAVLPRICSW 143 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 + ++ + I + R S L ++ + Sbjct: 144 GHFKCKDTGFEFLFFNLHMDHIGKKARVESAFLVQDKMKELGKGKELP----AILTGDFN 199 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 + + + S L + R + +F D+ +S+++ RIDHI +S Sbjct: 200 VDQTHQSYDAFVSKGVLCDSYEKAGFRYAING----TFNDFDPNSFTE---SRIDHIFVS 252 Query: 230 PEA--------------------TSLLHSA--RIDTKPRGWTKPSDHTPVIVSLDIPEPR 267 P + ID K PSDH PV V L+ + + Sbjct: 253 PSFQVKRYGVLTDTYRSIVGKGEKKQANDCPEEIDIKTYQARTPSDHFPVKVELEFDQRQ 312 Query: 268 KK 269 +K Sbjct: 313 QK 314 >gi|160878851|ref|YP_001557819.1| endonuclease/exonuclease/phosphatase [Clostridium phytofermentans ISDg] gi|160427517|gb|ABX41080.1| Endonuclease/exonuclease/phosphatase [Clostridium phytofermentans ISDg] Length = 258 Score = 61.7 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 41/274 (14%), Positives = 83/274 (30%), Gaps = 33/274 (12%) Query: 4 VTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQE-----TKTEDKNFPFET 49 + V T+N+ N+ + R + +K+ N DI+C QE K +N Sbjct: 1 MKVVTFNIRCDYNQDGNNNFQYRKELILQKLKKENADIVCFQEALPHVVKWLKENLED-- 58 Query: 50 LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 Y+I +CG++ + E + + + Q++ Sbjct: 59 -----YYILSCGREKDLKGEQNTVAFKKEKYQLISMNTFWLSLTPDVPGTRYENQSMCPR 113 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC-YNPII 168 ++ + + K ++ ++ L +++ L + +I Sbjct: 114 SVTEVFLQDLETEKLYYLLNTHLDHEGSEARVLGMQQILKHMSGVAEQKKQAGFGKVEMI 173 Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 D + ++ D T H + K ID+I++ Sbjct: 174 LTGDFNGYPNSEEISLIAKSEFLRDLTSGMEGTFHDFG----RMQPAEK-----IDYIVV 224 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 S D + SDH PV V L+ Sbjct: 225 SSGLKCCTRELWTDCE--NGVFLSDHYPVSVVLE 256 >gi|29348040|ref|NP_811543.1| hypothetical protein BT_2630 [Bacteroides thetaiotaomicron VPI-5482] gi|260172059|ref|ZP_05758471.1| hypothetical protein BacD2_09356 [Bacteroides sp. D2] gi|293371640|ref|ZP_06618051.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CMC 3f] gi|315920369|ref|ZP_07916609.1| conserved hypothetical protein [Bacteroides sp. D2] gi|29339942|gb|AAO77737.1| conserved hypothetical protein with endonuclease/exonuclease/phosphatase family domain [Bacteroides thetaiotaomicron VPI-5482] gi|292633337|gb|EFF51907.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CMC 3f] gi|313694244|gb|EFS31079.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 316 Score = 61.7 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 46/302 (15%), Positives = 87/302 (28%), Gaps = 45/302 (14%) Query: 2 SVVTVATWNV-----------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETL 50 + +TVA++N+ N R +A ++ ++ DI QE E L Sbjct: 26 TSITVASYNLRNANGGDSINGNGWGQRYPVIAQIVQYHDFDIFGTQECFIHQLKDMKEAL 85 Query: 51 QSLNY-HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 +Y + K + + V L + + Sbjct: 86 PGYDYIGVGRDDGKEKGEHSAIFYRTDKFDVIEKGDFWLSETPDVPSKGWDAVLPRICSW 145 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 + ++ + I + R S L ++ + Sbjct: 146 GHFKCKDTGFEFLFFNLHMDHIGKKARVESAFLVQDKMKELGKGKELP----AILTGDFN 201 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 + + + S L + R + +F D+ +S+++ RIDHI +S Sbjct: 202 VDQTHQSYDAFVSKGVLCDSYEKAGFRYAING----TFNDFDPNSFTE---SRIDHIFVS 254 Query: 230 PEA--------------------TSLLHSA--RIDTKPRGWTKPSDHTPVIVSLDIPEPR 267 P + ID K PSDH PV V L+ + + Sbjct: 255 PSFQVKRYGVLTDTYRSIVGKGEKKQANDCPEEIDIKTYQARTPSDHFPVKVELEFDQRQ 314 Query: 268 KK 269 +K Sbjct: 315 QK 316 >gi|256839005|ref|ZP_05544515.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|256739924|gb|EEU53248.1| conserved hypothetical protein [Parabacteroides sp. D13] Length = 365 Score = 61.7 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 42/284 (14%), Positives = 78/284 (27%), Gaps = 43/284 (15%) Query: 3 VVTVATWNV------NSIRARIHNLAAWIKENNPDIICLQET------KTEDKNFPFETL 50 V+ V T+NV N + + + +I ++ DI+CLQE K+ + ++ L Sbjct: 101 VLKVLTYNVMAFGYKNHTKIAPNKIIQYIANSDADIVCLQEYATAKSEKSLTASKIYDAL 160 Query: 51 QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 Y + ++ + + I + L + N Sbjct: 161 SMYPYRSVFYQSSTKFQSFGIAVFSKYPLSNSRMVKYDSDYNGSSVHEVNIKGKKLTLIN 220 Query: 111 LYLPHGNPITSTKYDDK-----------ISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159 +L + F + + A I Sbjct: 221 NHLESFKLTMEDRTRYSSLIKSFSSDGLDDLKGAFEQKLGPAFRIRAKQAEAVSKEIKNA 280 Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK 219 D ND + R L + + + ++ Sbjct: 281 KGDYVLVCGDFNDTPISYAHRTIQGDLMDAFAESGRGMGITYNQNFFWF----------- 329 Query: 220 GIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 RID+I+ SP TS + +D SDH P+ L + Sbjct: 330 --RIDNILHSPNMTS--MNCSVDKVAY-----SDHYPLWCYLKL 364 >gi|294932897|ref|XP_002780496.1| ap endonuclease, putative [Perkinsus marinus ATCC 50983] gi|239890430|gb|EER12291.1| ap endonuclease, putative [Perkinsus marinus ATCC 50983] Length = 395 Score = 61.7 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 43/332 (12%), Positives = 95/332 (28%), Gaps = 62/332 (18%) Query: 3 VVTVATWNVNSIRARIHN------LAAWIKENNPDIICLQETKT------EDKNFPF--- 47 + + WN +S+ RI N +A +K+++ +++C+ E + Sbjct: 34 TIRLMAWNADSLLNRIKNKETAKEIAKVVKDHDVNVLCVCEVRMACESCSSTGAIDRVNS 93 Query: 48 --ETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT 105 + L + T L + + + + F + Sbjct: 94 NQGAERDLVVNFLTRQCGFDQLYFSLRNIKQAGVGMFMRKMPKPDRVHFKIPGTEVGGDG 153 Query: 106 LRIGNLYLPHGNP----------------ITSTKYDDKISWIKRFLRFASQRLELEEPLI 149 + + T + + + F + E +I Sbjct: 154 FHHPEGRIILADFASENLQLLLTYVPNNGWTEDSFAKRRRFDCEVKSFLANAKSQGERII 213 Query: 150 FAGDYNIIPQPHDCYNPIIWENDACFTL---------------EVRQSFQKLQNMGFTDA 194 + GD N+ +D W + E + + L+ G D+ Sbjct: 214 WLGDLNVAASWNDVGPNPAWFRRQKQSPGLCDDDVGQPGFTQAEQNRFAELLEAGGLIDS 273 Query: 195 IRATHDTHHLY---SFWDYYAD-------SWSKNKGIRIDHIMLSPEATSLLHSAR---I 241 R H ++ KG+RID++++ + S I Sbjct: 274 YRQCHHEEDWEKDATWRGAPGKPPNPPEFGRFYGKGMRIDYVLVPESMKDDILSVENLGI 333 Query: 242 DTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDS 273 + R SDH P++ ++ + +P +D Sbjct: 334 GKE-RKGFMGSDHAPLLAAIKVSQPAVLSEDP 364 >gi|220917964|ref|YP_002493268.1| Endonuclease/exonuclease/phosphatase [Anaeromyxobacter dehalogenans 2CP-1] gi|219955818|gb|ACL66202.1| Endonuclease/exonuclease/phosphatase [Anaeromyxobacter dehalogenans 2CP-1] Length = 261 Score = 61.7 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 37/266 (13%), Positives = 71/266 (26%), Gaps = 34/266 (12%) Query: 5 TVATWNVNSIRAR-----IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 V TWNV+ +R +A + + D+ LQE P + Sbjct: 4 RVVTWNVHGLRGAGRRPDPERIARVLDDIGADVAGLQEVGAR---LPGADAHAA---EAL 57 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 NG + ++ + R P+ Sbjct: 58 ARLTGLNGAFGPTLQHARGFAYGNAILSRHPIDATRTYDLSVPGREPRGCLRADLDLGPM 117 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + + R R + L I + +P++ D + Sbjct: 118 RVHVFAAHLGLHWRERRRQAAALLS----------ADILRDAALSHPLVLVGDFNSPSDR 167 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + L+ A+ A S W +R+D + + + Sbjct: 168 SAVPRWLRRTLTDCAVAAGRPAATFPSAWPL----------LRLDRAYVDAAL--RVLAC 215 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPE 265 + P + SDH P++V L++ E Sbjct: 216 EVIRTPLAR-RASDHLPLVVELELTE 240 >gi|20196208|dbj|BAB90842.1| bucentaur [Cervus nippon] Length = 369 Score = 61.7 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 37/289 (12%), Positives = 71/289 (24%), Gaps = 37/289 (12%) Query: 6 VATWNVNSIRARIHNLAAWIKEN----NPDIICLQETKTE-DKNFPFETLQSLNYHIETC 60 + TWNV S+ +K+ N DI+ + E K + H Sbjct: 103 IGTWNVRSMN---PGKLDVVKQEMERINIDILGISELKWTGMGELNSDD------HYIYY 153 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + ++ + + G +L I Sbjct: 154 CGQQSLRRNGVALIVNKRVRNAIIGCNLKNDRMISVRFQGKPFNLTVIQVYAPTPYAEEG 213 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + + L + IP + + +E Sbjct: 214 EVYRFYEDLQHLLEITPKIDVLFIIGDWNAKVGSQEIPGITGRFGLGMQNEAGRRLIEFC 273 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 N + LY++ + ID+I+ S + SA+ Sbjct: 274 H-----HNRLVITNTLFQQPSRRLYTWTSPDGRYRDQ-----IDYIICRQRWRSSVQSAK 323 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI----------PEPRKKQQDSTSQNMK 279 G SDH +I + P ++D+T++ K Sbjct: 324 TRP---GADCGSDHKLLIAKFRLKLKIIPKTTRPFRVTNEEDATNEEAK 369 >gi|291298430|ref|YP_003509708.1| endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis DSM 44728] gi|290567650|gb|ADD40615.1| Endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis DSM 44728] Length = 289 Score = 61.7 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 32/251 (12%), Positives = 66/251 (26%), Gaps = 36/251 (14%) Query: 18 IHNLAAWIKENNPDIICLQET-----KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILS 72 + +A I+ N D+I LQE +++ + P + L H+ + Sbjct: 70 LERIARRIEALNVDVIGLQEVDRFWKRSDHVDQPAWLSRRLGLHVAFGLNELRRSDGAGR 129 Query: 73 KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIK 132 + + + LR +T + Sbjct: 130 RREYGTAILSRWPIRETRNVALPRWDDHARHGLLRTEIDMPGGSLSFATTHLIHAHHDEE 189 Query: 133 RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192 R + + + + ND T + ++ + Sbjct: 190 RAAQAKAVAKQFA-------------DDARRSVVVGDFNDEPNTPAIAAMTRRFTDAWAV 236 Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPS 252 + YS+ RID++ S + + DT PR S Sbjct: 237 AG------SGKGYSYSSTKPK-------RRIDYVFGSEDLEPRAMTVD-DTDPR----AS 278 Query: 253 DHTPVIVSLDI 263 DH P++ ++ Sbjct: 279 DHLPILTEFEL 289 >gi|194384902|dbj|BAG60857.1| unnamed protein product [Homo sapiens] Length = 392 Score = 61.7 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 46/285 (16%), Positives = 82/285 (28%), Gaps = 59/285 (20%) Query: 2 SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 S+ ++ TWN++ + RAR + +++ +PD+I LQE P Sbjct: 142 SMFSLITWNIDGLDLNNLSERAR--GVCSYLALYSPDVIFLQEV------IPP------- 186 Query: 55 YHIETCGQKSYNGVAI-LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 Y+ + S + + I+ L Q + + L + Sbjct: 187 YYSYLKKRSSNYEIITGHEEGYFTAIMLKKSRVKLKSQEIIPFPSTKMMRNLLCVHVNVS 246 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + + ++ + + L+ Q +I+ D Sbjct: 247 GNELCLMTSHLESTRGHAAERMNQLKMVLK-------------KMQEAPESATVIFAGDT 293 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG------IRIDHIM 227 L N H Y+ WD +S N G +R D I Sbjct: 294 NLRDREVTRCGGLPNNIVDVWEFLGKPKHCQYT-WDTQMNS---NLGITAACKLRFDRIF 349 Query: 228 LSPEATSLLHSARIDT---KPRGWTK------PSDHTPVIVSLDI 263 + I G K PSDH ++ +LDI Sbjct: 350 ----FRAAAEEGHIIPRSLDLLGLEKLDCGRFPSDHWGLLCNLDI 390 >gi|255089412|ref|XP_002506628.1| predicted protein [Micromonas sp. RCC299] gi|226521900|gb|ACO67886.1| predicted protein [Micromonas sp. RCC299] Length = 583 Score = 61.7 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 4/57 (7%) Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 Y+ W+ A + N G RID+ + + + I K G SDH PV + Sbjct: 310 GAYTCWNVSAGAQLTNYGSRIDYFLCDEVTAASVARCGIAPKHEG----SDHAPVFI 362 >gi|255085372|ref|XP_002505117.1| predicted protein [Micromonas sp. RCC299] gi|226520386|gb|ACO66375.1| predicted protein [Micromonas sp. RCC299] Length = 418 Score = 61.7 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 50/348 (14%), Positives = 92/348 (26%), Gaps = 89/348 (25%) Query: 6 VATWNVNSI--RARI----HNLAAWIKENN-PDIICLQE-----------------TKTE 41 TWN NS+ R R L +++E + PD+IC+QE TK Sbjct: 45 FVTWNANSLLGRLRKQPDKDALFEYLREKDLPDVICVQETWLPAAAPNRRGTLKDDTKAA 104 Query: 42 DKN-------FPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARF 94 ++ + L + + K ++ K + V Sbjct: 105 REDAALIHLCLRQKPLSAYRPYWSCADVKRAGCAVLVKKDVDVVSVRRSLTASNGANGDV 164 Query: 95 IEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFA---------------- 138 + R L + T+ A Sbjct: 165 AHDEGRVLLLEFRSFVLLNTYAQNNGWTQESFAKRRRWDAEVHAFIAGNTAGATPRPRFD 224 Query: 139 ----SQRLELEEPLIFAGDYNIIPQPHDCYNPIIW------ENDACFTLEVRQSFQKL-- 186 + +PL++ GD N+ + D +P + E Sbjct: 225 DSDLNATSRRFKPLMWTGDLNVCHKEIDVTHPRFFATQKPEGRKGKPPPETPTDPGDCGQ 284 Query: 187 -----QNMGFTDAIRATHDTHHLY-----------SFWDYYA-DSWSKNKG--IRIDHIM 227 + + H Y ++ + + K +G +R+D+ Sbjct: 285 PGFTRNERTRFERLVTAHALVDAYRRQRGDVKDAMTWMGHPGVVAVGKYRGMGMRLDYFF 344 Query: 228 LSPEATSLLHSARIDTKPRGW----TKP------SDHTPVIVSL-DIP 264 + E + + T G +P SDH V + L D+P Sbjct: 345 VETELANRVEVCEQATDGMGLAAMAERPASAFFGSDHCAVYLRLKDVP 392 >gi|225448996|ref|XP_002273591.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1948 Score = 61.7 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 30/259 (11%), Positives = 73/259 (28%), Gaps = 35/259 (13%) Query: 6 VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +WN + +R + +++ PDI+ +QETK + + Sbjct: 1341 IISWNTRGLGSRKKRRVVKDFLRSEKPDIVMIQETK------------------KAECDR 1382 Query: 64 SYNGVAILSKYQPIEI--VTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 + G ++ + + G L + + + + + + G+ Sbjct: 1383 RFVGSLWTARNKEWAVLPACGASGGILVMWDSKKLHSEEVVLGSFSVSVKFAVDGSEQFW 1442 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + F + ++ + T ++ Sbjct: 1443 LSAVYGPNSTALRKDFWEELSDIFGLSSPCWCVGGDFNVIRRCSEK--LGGGRLTPSMKD 1500 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 ++ D +++ + K R+D + S E L + Sbjct: 1501 LDDFIRENELIDPPL----RSASFTWSNMQEHPVCK----RLDRFLYSNEWEQLFPQSLQ 1552 Query: 242 DTKPRGWTKPSDHTPVIVS 260 D PR SDH P+++ Sbjct: 1553 DVLPR---WTSDHWPIVLE 1568 >gi|301308230|ref|ZP_07214184.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 20_3] gi|300833700|gb|EFK64316.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 20_3] Length = 365 Score = 61.7 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 42/284 (14%), Positives = 78/284 (27%), Gaps = 43/284 (15%) Query: 3 VVTVATWNV------NSIRARIHNLAAWIKENNPDIICLQET------KTEDKNFPFETL 50 V+ V T+NV N + + + +I ++ DI+CLQE K+ + ++ L Sbjct: 101 VLKVLTYNVMAFGYKNHTKIAPNKIIQYIANSDADIVCLQEYATAKSEKSLTASKIYDAL 160 Query: 51 QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 Y + ++ + + I + L + N Sbjct: 161 SMYPYRSVFYQSSTKFQSFGIAVFSKYPLSNSRMVKYDSDYNGSSVHEVNIKGKKLTLIN 220 Query: 111 LYLPHGNPITSTKYDDK-----------ISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159 +L + F + + A I Sbjct: 221 NHLESFKLTMEDRTRYSSLIKSFSSDGLDDLKGAFEQKLGPAFRIRAKQAEAVSEEIKNA 280 Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK 219 D ND + R L + + + ++ Sbjct: 281 KGDYVLVCGDFNDTPISYAHRTIQGDLMDAFAESGRGMGITYNQNFFWF----------- 329 Query: 220 GIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 RID+I+ SP TS + +D SDH P+ L + Sbjct: 330 --RIDNILHSPNMTS--MNCSVDKVAY-----SDHYPLWCYLKL 364 >gi|313156903|gb|EFR56341.1| endonuclease/exonuclease/phosphatase family protein [Alistipes sp. HGB5] Length = 294 Score = 61.7 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 40/279 (14%), Positives = 78/279 (27%), Gaps = 37/279 (13%) Query: 7 ATWNV-----------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55 AT+N+ N R+ +++ I+ ++ DI QE L +Y Sbjct: 26 ATYNIRQLNAKDTAEGNGWERRLPVISSLIRFHDFDIFGAQEVFHSQLQGMLAALPGYDY 85 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + G + + L + + + + +RI Sbjct: 86 -VGVGRDDGAAGGEYSAIFYKRGRFRLLDSGHFWLSEDPSKPGKGWDAKYVRICTW---- 140 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 G + Q LI A + + Sbjct: 141 GRFYDRQSRQRFWFFTTHTDHRGEQAQAESCRLILAKIEELCRGERVILTGDFNVGETSR 200 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 + + + L + D + +++D ++ RID++ ++P Sbjct: 201 SYAILRDSGILSD--TYDTAEIRYAETGTENWFDPDIKTF-----RRIDYLFVTPGF--R 251 Query: 236 LHSARIDTK------PRGWTK------PSDHTPVIVSLD 262 + I T P G + PSDH PV V L+ Sbjct: 252 VLRYGILTDTYRSENPDGGERKFRARTPSDHFPVQVELE 290 >gi|197123175|ref|YP_002135126.1| endonuclease/exonuclease/phosphatase [Anaeromyxobacter sp. K] gi|196173024|gb|ACG73997.1| Endonuclease/exonuclease/phosphatase [Anaeromyxobacter sp. K] Length = 261 Score = 61.7 bits (148), Expect = 1e-07, Method: Composition-based stats. Identities = 37/266 (13%), Positives = 70/266 (26%), Gaps = 34/266 (12%) Query: 5 TVATWNVNSIRAR-----IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 V TWNV+ +R +A + + D+ LQE P + Sbjct: 4 RVVTWNVHGLRGAGRRPDPERIARVLDDIGADVAGLQEVGAR---LPGADAHAA---EAL 57 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 NG + ++ + R P+ Sbjct: 58 ARLTGLNGAFGPTLQHARGFAYGNAILSRHPIDATRTYDLSVPGREPRGCLRADLDLGPM 117 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + + R R + L I + +P++ D + Sbjct: 118 RVHVFAAHLGLHWRERRRQAAALLS----------ADILRDAALSHPLVLVGDFNSPSDR 167 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + L+ A+ A S W +R+D + + Sbjct: 168 SAVPRWLRRTLTDCAVAAGRPAATFPSAWPL----------LRLDRAYVDAAL--RVLGC 215 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPE 265 + P + SDH P++V L++ E Sbjct: 216 EVIRTPLAR-RASDHLPLVVELELTE 240 >gi|227889346|ref|ZP_04007151.1| conserved hypothetical protein [Lactobacillus johnsonii ATCC 33200] gi|227850148|gb|EEJ60234.1| conserved hypothetical protein [Lactobacillus johnsonii ATCC 33200] Length = 59 Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 24/54 (44%), Gaps = 1/54 (1%) Query: 3 VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55 ++ +WNVN +RA + H + + DI +Q+T+ E + Y Sbjct: 6 IMKFMSWNVNGLRATLRHGFVNTFTDLDADIFGIQDTRVEPNEVKIDLPGYYQY 59 >gi|149011294|ref|ZP_01832541.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP19-BS75] gi|147764284|gb|EDK71215.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP19-BS75] Length = 278 Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 35/195 (17%), Positives = 58/195 (29%), Gaps = 23/195 (11%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDK---NFPFETL 50 + + +WN++S+ A + + + N DII +QETK K E L Sbjct: 22 MKLISWNIDSLNAALTSDSARAKLSQEVLQTLVAENADIIAIQETKLSAKGPTKKHVEIL 81 Query: 51 QSL--NYHIETCGQKS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 + L Y + Y G L K + ++ Sbjct: 82 EELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAPSTMDLEGRIITLEFD 141 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 G+ + + L+ E+P++ GDYN+ D Sbjct: 142 AFFVTQVYTPNAGDGLKRLEERQVWDTKYAEY---LAELDKEKPVLATGDYNVAHNEIDL 198 Query: 164 YNPIIWENDACFTLE 178 NP FT E Sbjct: 199 ANPASNRRSPGFTDE 213 >gi|119575862|gb|EAW55458.1| TRAF and TNF receptor associated protein, isoform CRA_a [Homo sapiens] Length = 392 Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 46/285 (16%), Positives = 82/285 (28%), Gaps = 59/285 (20%) Query: 2 SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 S+ ++ TWN++ + RAR + +++ +PD+I LQE P Sbjct: 142 SMFSLITWNIDGLDLNNLSERAR--GVCSYLALYSPDVIFLQEV------IPP------- 186 Query: 55 YHIETCGQKSYNGVAI-LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 Y+ + S + + I+ L Q + + L + Sbjct: 187 YYSYLKKRSSNYEIITGHEEGYFTAIMLKKSRVKLKSQEIIPFPSTKMMRNLLCVHVNVS 246 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + + ++ + + L+ Q +I+ D Sbjct: 247 GNELCLMTSHLESTRGHAAERMNQLKMVLK-------------KMQEAPESATVIFAGDT 293 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG------IRIDHIM 227 L N H Y+ WD +S N G +R D I Sbjct: 294 NLRDREVTRCGGLPNNIVDVWEFLGKPKHCQYT-WDTQMNS---NLGITAACKLRFDRIF 349 Query: 228 LSPEATSLLHSARIDT---KPRGWTK------PSDHTPVIVSLDI 263 + I G K PSDH ++ +LDI Sbjct: 350 ----FRAAAEEGHIIPRSLDLLGLEKLDCGRFPSDHWGLLCNLDI 390 >gi|147846541|emb|CAN79508.1| hypothetical protein VITISV_038335 [Vitis vinifera] Length = 1167 Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 32/259 (12%), Positives = 65/259 (25%), Gaps = 68/259 (26%) Query: 4 VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + TWNV ++ + +I+ D++C+QETK ++ Sbjct: 723 MKIITWNVRGANDSSKRKIIKNYIRNQRVDLMCIQETKIQE------------------- 763 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +S+ + D A I + L G S Sbjct: 764 ---------MSEGIVRSLGLGRFSDWRARNAEGAAGGILICWDKRVLEILDWEEGQFSLS 814 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 ++ + + + F +W E Sbjct: 815 CRF--------KITENGAIWVFTGVYGPFTKVEREGMWEELGAIRGLW---GDPWGESSH 863 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 G + +W++ +D ++SP Sbjct: 864 GVXGHMEWGLNN-------------------QAWAR-----LDRFLVSPSWLDQFSGV-- 897 Query: 242 DTKPRGWTKPSDHTPVIVS 260 T+ R SDH P+++ Sbjct: 898 -TQGRLSRPTSDHFPIVLE 915 >gi|299147485|ref|ZP_07040550.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_23] gi|298514763|gb|EFI38647.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_23] Length = 316 Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 46/302 (15%), Positives = 87/302 (28%), Gaps = 45/302 (14%) Query: 2 SVVTVATWNV-----------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETL 50 + +TVA++N+ N R +A ++ ++ DI QE E L Sbjct: 26 TSITVASYNLRNANGGDSINGNGWGQRYPVIAQIVQYHDFDIFGTQECFIHQLKDMKEAL 85 Query: 51 QSLNY-HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 +Y + K + + V L + + Sbjct: 86 PGYDYIGVGRDDGKEKGEHSAIFYRTDKFDVIEKGDFWLSETPDVPSKGWDAVLPRICSW 145 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 + ++ + I + R S L ++ + Sbjct: 146 GHFKCKDTGFEFLFFNLHMDHIGKKARVESAFLVQDKMKELGKGKELP----AILTGDFN 201 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 + + + S L + R + +F D+ +S+++ RIDHI +S Sbjct: 202 VDQTHQSYDAFVSKGVLCDSYEKAGFRYAING----TFNDFDPNSFTE---SRIDHIFVS 254 Query: 230 PEA--------------------TSLLHSA--RIDTKPRGWTKPSDHTPVIVSLDIPEPR 267 P + ID K PSDH PV V L+ + + Sbjct: 255 PSFHVKKYGVLTDTYRSIVGKGEKKQANDCPEEIDIKTYQARTPSDHFPVKVELEFDQRQ 314 Query: 268 KK 269 +K Sbjct: 315 QK 316 >gi|45478110|gb|AAS66226.1| LRRG00135 [Rattus norvegicus] Length = 1451 Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 47/251 (18%), Positives = 75/251 (29%), Gaps = 32/251 (12%) Query: 6 VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + N+N + + I L WI +P CLQET DK+ + ++ + GQK Sbjct: 12 LISLNINGLNSPIKRHRLTNWICNEDPAFCCLQETHLRDKDRHYLRVKGWKTTFQANGQK 71 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 GVAIL + + + I I + Sbjct: 72 KQAGVAILISNKINF--------------QLKVIKKDKEGHFIFIKGKIHQDELSILNIY 117 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + + + + I GD+N D +D EV Sbjct: 118 APNTRAPTYIKETLLKLKTHIAPHTIIVGDFNTPLSSMDRSWKQKLNSDVDRLREVMSQM 177 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 TD R + Y+F+ ++SK IDHI+ + I Sbjct: 178 ------DLTDIYRTFYPKAKGYTFFSAPHGTFSK-----IDHIIGQKTGLNRYRKIEIIP 226 Query: 244 KPRGWTKPSDH 254 SDH Sbjct: 227 CVL-----SDH 232 >gi|122938178|gb|ABM68943.1| APEX1 [Lemur catta] Length = 129 Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 7/116 (6%) Query: 24 WIKENNPDIICLQETKTEDKNFPFETLQSLN----YHIETCGQKSYNGVAILSKYQPIEI 79 W+KE +PDI+CLQETK + P E + Y ++ Y+GV +LS+ P+++ Sbjct: 1 WVKEESPDILCLQETKCSENKLPTELQELAGLSHQYWSAPSDKEGYSGVGLLSRQCPLKV 60 Query: 80 VTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135 + ++ D + R I A + + + G + +Y + R Sbjct: 61 SYGIGEEEHDQEGRVIVAE---FDKFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKF 113 >gi|326790116|ref|YP_004307937.1| endonuclease/exonuclease/phosphatase [Clostridium lentocellum DSM 5427] gi|326540880|gb|ADZ82739.1| Endonuclease/exonuclease/phosphatase [Clostridium lentocellum DSM 5427] Length = 266 Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 39/282 (13%), Positives = 78/282 (27%), Gaps = 36/282 (12%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET-------KTEDKNFPFETL- 50 + + T N +S R ++ LA IKE + DII LQE +D++ + Sbjct: 1 MRILTLNTHSWREENQEEKMSYLAEIIKERDYDIIALQEINQSTASPYLQDRHLRRDNFM 60 Query: 51 -------QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 + + V + + + Sbjct: 61 VVLQQLIEKIGGPKYNSFWDLSKVVRDEYEEGSAILCKMPITHTSCFTVSKSRDRDDVKA 120 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 + + + Y ++ + + Sbjct: 121 RKIV-----------KVTVTYKEQEIDLYSCHLGWWHDEIEPFEYQCDRLVEEMDSDKLS 169 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223 + N+A E + L + GF D + + A G+RI Sbjct: 170 LLMGDFNNNANLREEG---YDYLIDKGFYDTYILAGEKDQGVTVQGEIAGWKGNKVGLRI 226 Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 D I+++ T + S+++ SDH V V L++ + Sbjct: 227 DLILVNKTLT--VKSSKVIFNGDYKNVVSDHYGVEVELELED 266 >gi|311032597|ref|ZP_07710687.1| hypothetical protein Bm3-1_19034 [Bacillus sp. m3-13] Length = 294 Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 52/283 (18%), Positives = 88/283 (31%), Gaps = 30/283 (10%) Query: 5 TVATWNVNSIRA-----------RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 TV ++N +R R H +A I PD+I QE + ET + Sbjct: 6 TVMSFN---LRVIVASDPFSWDDRKHWIADTINTYTPDVIGTQEATIPMLEWLKETFEE- 61 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVT--HLPGDDLDVQARFIEATFTINTQTLRIGNL 111 +Y + + V S + G + + I T + RI + Sbjct: 62 SYEVYAVNRTESTEVGEFSAVFVKKSRFIIGSKGSFMLAETPDIIGTMGWDAHCERICSW 121 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 I + + + + L + E + + ++ P+I Sbjct: 122 ----VELIPKRQTEPVLRFFNTHLDHMGKLARKEGLKLICDVIR--RKDNEQSLPVILTG 175 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 D E + + L +F Y + KG ID+I S Sbjct: 176 DFNDAPESEALAEVSSMKSCYSCFTEEEKENSL-TFHAYEGGT----KGSPIDYIFGSNG 230 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDST 274 +ARI PSDH PV+ ++ I E + + ST Sbjct: 231 VE--FLTARILRDSFNGGYPSDHYPVLATVKILEGDEDLKKST 271 >gi|297677283|ref|XP_002816533.1| PREDICTED: 5'-tyrosyl-DNA phosphodiesterase-like [Pongo abelii] Length = 392 Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 46/285 (16%), Positives = 81/285 (28%), Gaps = 59/285 (20%) Query: 2 SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 S+ ++ TWN++ + RAR + +++ +PD+I LQE P Sbjct: 142 SMFSLITWNIDGLDLNNLSERAR--GVCSYLALYSPDVIFLQEV------IPP------- 186 Query: 55 YHIETCGQKSYNGVAI-LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 Y+ S + + I+ L Q + + L + Sbjct: 187 YYSYLKKSSSNYEIITGHEEGYFTAIMLKKSRVKLKSQEIIPFPSTKMMRNLLCVHVSVS 246 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + + ++ + + L+ Q +I+ D Sbjct: 247 GNELCLMTSHLESTRGHAAERMNQLKMVLK-------------KMQEAPESATVIFAGDT 293 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG------IRIDHIM 227 L N H Y+ WD +S N G +R D I Sbjct: 294 NLRDREVTRCGGLPNNIVDVWEFLGKPKHCQYT-WDTQMNS---NLGITAACKLRFDRIF 349 Query: 228 LSPEATSLLHSARIDT---KPRGWTK------PSDHTPVIVSLDI 263 + I G K PSDH ++ +LDI Sbjct: 350 ----FRAAAEEGHIVPQSLDLLGLEKLDCGRFPSDHWGLLCNLDI 390 >gi|319780945|ref|YP_004140421.1| endonuclease/exonuclease/phosphatase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317166833|gb|ADV10371.1| Endonuclease/exonuclease/phosphatase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 289 Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 42/295 (14%), Positives = 75/295 (25%), Gaps = 44/295 (14%) Query: 4 VTVATWNVN-SIRARIHNLAAW--IKEN--NPDIICLQE-TKTEDK----NFPFETLQSL 53 + + T+N+ I + I + D+I LQE T+ + + E ++L Sbjct: 1 MKLVTYNIQYGIG--LDGQYDVGRIADAVRGADVIALQEVTRNNPRNGGRDMVAEIGEAL 58 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 + G + T G+ + + + + ++ + Sbjct: 59 PDYFAVYGSNFEANIGSHIDNGRAVTKTFQLGNMVLSRTPIHLSRNLLLPRSRSFEMMNF 118 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDY---------------NIIP 158 G + LE + F I Sbjct: 119 QRGALEALIETPLGFIRFYSIHLDHRSPLERASQIQFLRQRMLNYALEGGALSGVAEIGL 178 Query: 159 QPHDCYNPIIWENDACF------------TLEVRQSFQKLQNMGFTDAIRATHDTHHLYS 206 + D + + A+R L S Sbjct: 179 PELPHPEAFVGMGDFNMLAGSPEYVELAGRPDHEFGMPLTADFAVDAALRLNATGDDLIS 238 Query: 207 FWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + D + + RID+I S L +D K G SDH PV V L Sbjct: 239 WVDPKQPTDPS-RHKRIDYIFTSASLARSLQRLWVDRKAVG----SDHLPVWVEL 288 >gi|37654232|gb|AAQ96221.1| LRRGT00008 [Rattus norvegicus] Length = 1575 Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 46/251 (18%), Positives = 74/251 (29%), Gaps = 32/251 (12%) Query: 6 VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + N+N + + I L WI +P CLQET DK+ + ++ + GQK Sbjct: 623 LISLNINGLNSPIKRHRLTNWIGNEDPAFCCLQETHLRDKDRHYLRVKGWKTTFQANGQK 682 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 GVAIL + + + I I + Sbjct: 683 KQAGVAILISNKINF--------------QLKVIKKDKEGHFIFIKGKIHQDELSILNIY 728 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + + + + I GD+N D D EV Sbjct: 729 APNTRAPTYVKETLLKLKTHITPHTIIVGDFNTPLSSMDRSWKQKLHRDVDRLREVMSQM 788 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 TD R + Y+F+ ++SK I+HI+ + I Sbjct: 789 ------DLTDIYRTFYPKAKGYTFFSAPHGTFSK-----INHIVGQKTGLNRYRKIEIIP 837 Query: 244 KPRGWTKPSDH 254 SDH Sbjct: 838 CVL-----SDH 843 >gi|187932631|ref|YP_001886154.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum B str. Eklund 17B] gi|187720784|gb|ACD22005.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum B str. Eklund 17B] Length = 258 Score = 61.3 bits (147), Expect = 1e-07, Method: Composition-based stats. Identities = 45/277 (16%), Positives = 82/277 (29%), Gaps = 37/277 (13%) Query: 4 VTVATWNVNSIR------------ARIHNLAAWIKENNPDIICLQETKTEDKNFPF---- 47 + V T+N +R R + + + + + DII QE +K F Sbjct: 1 MKVMTFN---LRCDFFMDFKNRWDERRNLVFDIVNKYDCDIIGTQE--ATEKMFNDISNN 55 Query: 48 -ETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 + + N + I K++ + T D+ D R + T Sbjct: 56 IDAFNIIGNPRSKKLFSERNDILISKKHKVNDYRTFWLRDNYDKIGRSKWYSMFPRICTT 115 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 I L I ++ D + + + ++ Q + Sbjct: 116 AIIELENSKRIRICNSHLDFLLPQARAYELKK------------LSEFIKKEQEKEDLPL 163 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226 II + N+ + LY+ +K KG ID+I Sbjct: 164 IIMGDFNSNPNSKLIKNFTSGNIFNKRLVAVQDMNKELYT-KATMGHFKNKEKGSHIDYI 222 Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +S E + I PSDH P++ ++I Sbjct: 223 FVSEEFE--IIDVEIVKYNVNGKYPSDHYPLMAEINI 257 >gi|150010182|ref|YP_001304925.1| hypothetical protein BDI_3605 [Parabacteroides distasonis ATCC 8503] gi|255012556|ref|ZP_05284682.1| hypothetical protein B2_01514 [Bacteroides sp. 2_1_7] gi|149938606|gb|ABR45303.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503] Length = 365 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 42/284 (14%), Positives = 78/284 (27%), Gaps = 43/284 (15%) Query: 3 VVTVATWNV------NSIRARIHNLAAWIKENNPDIICLQET------KTEDKNFPFETL 50 V+ V T+NV N + + + +I ++ DI+CLQE K+ + ++ L Sbjct: 101 VLKVLTYNVMAFGYKNHTKIAPNKIIQYIANSDADIVCLQEYATAKSEKSLTASKIYDAL 160 Query: 51 QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 Y + ++ + + I + L + N Sbjct: 161 SMYPYRSVFYQSSTKFQSFGIAVFSKYPLSNSRMVKYDSDYNGSSVHEVNIKGKKLTLIN 220 Query: 111 LYLPHGNPITSTKYDDK-----------ISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159 +L + F + + A I Sbjct: 221 NHLESFKLTMEDRTRYSSLIKSFSSDGLDDLKGAFEQKLGPAFRIRAKQAEAVSKEIKNA 280 Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK 219 D ND + R L + + + ++ Sbjct: 281 KGDYVLVCGDFNDTPISYAHRTIQGDLTDAFAESGRGMGITYNQNFFWF----------- 329 Query: 220 GIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 RID+I+ SP TS + +D SDH P+ L + Sbjct: 330 --RIDNILHSPNMTS--MNCSVDKVAY-----SDHYPLWCYLKL 364 >gi|189465268|ref|ZP_03014053.1| hypothetical protein BACINT_01614 [Bacteroides intestinalis DSM 17393] gi|189437542|gb|EDV06527.1| hypothetical protein BACINT_01614 [Bacteroides intestinalis DSM 17393] Length = 368 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 40/275 (14%), Positives = 80/275 (29%), Gaps = 25/275 (9%) Query: 2 SVVTVATWNVNSIRARIHN-----LAAWIKENNPDIICLQETKTEDK-----NFPFE-TL 50 + V ++N+ + + ++K + DI+CLQE +T + E L Sbjct: 102 NSFKVLSYNIMGFDGAVKKDGENPILNYLKNSGADILCLQEYQTIESSHYLSQKDVEKAL 161 Query: 51 QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 + YH ++ Y I++ D + I T+ + N Sbjct: 162 KDYPYHKIQTVGSGKGHTNRIACYSKYPILSSRRLDYVSEYNGSAVYELKIGEDTVMLIN 221 Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170 +L K + +++++ L+ + I + Sbjct: 222 NHLESNKLTKEDKVVYESMLK----SPETKKVKSGARLLIRKLAEASAIRGSQADSIAQK 277 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG---IRIDHIM 227 A + + ++ S N+ RID+I+ Sbjct: 278 IAASQHPYIIVCGDFNDTPISYAHRVIGQGLNDTFTQ-SGRGLGISYNQNKFYFRIDNIL 336 Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 S S + +D K SDH P+ L Sbjct: 337 ASKNLKSY--NCTVDRSI----KESDHYPIWCYLK 365 >gi|34392578|dbj|BAC82621.1| pol-like protein [Danio rerio] Length = 1148 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 44/266 (16%), Positives = 87/266 (32%), Gaps = 33/266 (12%) Query: 1 MSVVTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 M+ +T++T NV S+R+ R ++ +++K D+ LQE PF NY Sbjct: 10 MA-LTISTINVRSVRSPIRAQSVLSFLKLLKSDVFLLQEC-----ALPF----ISNYRKW 59 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + S + + + T + + + +L Sbjct: 60 EDVWTPGPSLWSGSNQNKND---GVAILIKNPNILVKGTTVVRDGRAFLVTLTFLGRDFN 116 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + + + L + + PL+ AGD+N I D + Sbjct: 117 VLNIYGHTDKNERYELLEDLQPHMLGKPPLVVAGDFNCILTQKDRKKADFKLDKT----- 171 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 +++ D R H ++++ + S RID+I + + + Sbjct: 172 STLLNNLVKDFKLVDCFRQVHPREEGFTWFSSDSTS-----ASRIDYIF-TRDFPPV--- 222 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIP 264 T SDHT + +L +P Sbjct: 223 ----DATLTPTFFSDHTILSCTLSLP 244 >gi|45478188|gb|AAS66265.1| LRRGT00174 [Rattus norvegicus] Length = 419 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 51/254 (20%), Positives = 82/254 (32%), Gaps = 33/254 (12%) Query: 6 VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + N+N + + I L WI+ +P CLQET DK+ + ++ + GQK Sbjct: 12 LISLNINGLNSPIKRHRLTNWIRNEDPAFCCLQETHLRDKDRHYLRVKGWKTTFQANGQK 71 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 GVAIL + + + I I + Sbjct: 72 KQAGVAILISNKINF--------------QLKVIKKDKEGHFIFIKGKIHQDELSILNIY 117 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + + + + I GD+N D +D EV Sbjct: 118 APNTRAPTYVKETLLKLKTHIAPHTIIVGDFNTPLSSMDRSWKQKLNSDVDRLREVMSQM 177 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL----LHSA 239 TD R + Y+F+ ++SK IDHI+ + +H Sbjct: 178 ------DLTDIYRTFYPKAKGYTFFSASHGTFSK-----IDHIIGQKTGLNRDRHWVHKQ 226 Query: 240 RI--DTKPRGWTKP 251 RI + KPR KP Sbjct: 227 RIQLEYKPRYRIKP 240 >gi|242079061|ref|XP_002444299.1| hypothetical protein SORBIDRAFT_07g019823 [Sorghum bicolor] gi|241940649|gb|EES13794.1| hypothetical protein SORBIDRAFT_07g019823 [Sorghum bicolor] Length = 235 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 43/254 (16%), Positives = 78/254 (30%), Gaps = 31/254 (12%) Query: 9 WNVNSIR--ARIHNLAAWIKENNPDIICLQETKTED-KNFPFETLQSLNYHIETCGQKSY 65 WNV + AR + ++++N IICLQETK + + N+ + Sbjct: 4 WNVRGLNNNARKDAVNELVRDSNATIICLQETKLQAIDQATVLRILGANF-ANSYAVSPA 62 Query: 66 NGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYD 125 + E L L + +I +Y P G+ Sbjct: 63 DNTRGGILLAVNENFFDLTNVLLSPHTITATIRMRADGVQWQITTVYGPQGDDQKLQFLQ 122 Query: 126 DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQK 185 + + +L + GD+N+I Q D N + S Sbjct: 123 EL----------QNIQLPSHGRWLVLGDFNLIYQAQDKNNTNLNRRLMGSFKSTLNSM-- 170 Query: 186 LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKP 245 ++ +++ + RID + +PE L + + P Sbjct: 171 --------NLKEIRLNGRRFTW----TNEQDNPTMSRIDRVFCTPEWEILFPACFLHFLP 218 Query: 246 RGWTKPSDHTPVIV 259 SDHTP+++ Sbjct: 219 SLM---SDHTPLLL 229 >gi|147780533|emb|CAN69126.1| hypothetical protein VITISV_008195 [Vitis vinifera] Length = 1844 Score = 61.3 bits (147), Expect = 2e-07, Method: Composition-based stats. Identities = 29/268 (10%), Positives = 76/268 (28%), Gaps = 49/268 (18%) Query: 4 VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + +WN + ++ + ++ PD++ +QETK E+ Sbjct: 757 MKIISWNTRGLGSKKKRRVVKNFLSSEKPDVVMIQETKKEE------------------- 797 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 + + + D + A I ++++ + G+ S Sbjct: 798 ---------CDRRLVGSVWSVRNKDWAALPASGASGGILIIWDSIKMRREEVVLGSFSVS 848 Query: 122 TKYDDKIS---WIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 K+ W+ + L + + + + + L Sbjct: 849 IKFAMDGCESLWLSAVYGPNNSALRKDFWVELSDIAGLSHPRWCVGGDFNVIRRSSEKLG 908 Query: 179 VRQSFQKLQNMGFTDAIRATHDTH---HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 + +++ D+ Y++ ++ R+D + S E Sbjct: 909 GSRLTPCMKDFDEFIRDCELIDSPLRSVSYTW----SNMQENPVCKRLDRFLYSNEWEQ- 963 Query: 236 LHSARIDTKPRGWTKP---SDHTPVIVS 260 + + P SDH P+++ Sbjct: 964 -----VFPQSLQGVLPRWTSDHWPIVLE 986 >gi|60680824|ref|YP_210968.1| putative endonuclease/exonuclease/phosphatase family protein [Bacteroides fragilis NCTC 9343] gi|60492258|emb|CAH07023.1| putative endonuclease/exonuclease/phosphatase family protein [Bacteroides fragilis NCTC 9343] Length = 285 Score = 61.0 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 39/277 (14%), Positives = 79/277 (28%), Gaps = 37/277 (13%) Query: 4 VTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL- 53 V VAT+N+ NS + R + +I+E +PD++ +QE + + L L Sbjct: 27 VRVATFNIRYDNPGDSLNSWKYRKEKVCEFIREKHPDVLGMQEV--LNHQL-KDLLSGLP 83 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTH----LPGDDLDVQARFIEATFTINTQTLRIG 109 +Y G++ + + + + + + Sbjct: 84 DYAYVGVGREDGKTQGEYAPVFYRKDKYDLLDSNTFWLSEHPDSIGKLGWDAACTRVATW 143 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 + + R S L +++ AG + + + Sbjct: 144 AKLKDKTTGKEFLMLNTHFDHVGTEARRNSALLIIDKIKEIAGTHPAMMTGDFNVSEEWE 203 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYA---DSWSKNKGIRIDHI 226 + E + Y+F D+ K ID I Sbjct: 204 AYKTITSNEFVLKDAWKIAGK---------QSGENYTFHDFGRVPVGEREK-----IDFI 249 Query: 227 MLSPEATSLLHSARID-TKPRGWTKPSDHTPVIVSLD 262 ++P+ + A I + T SDH + L+ Sbjct: 250 FVTPQI--KVADAEIISSAITDSTYLSDHNAHLADLE 284 >gi|326432699|gb|EGD78269.1| hypothetical protein PTSG_09334 [Salpingoeca sp. ATCC 50818] Length = 514 Score = 61.0 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 40/296 (13%), Positives = 81/296 (27%), Gaps = 35/296 (11%) Query: 3 VVTVATWNVNSI--R-ARIH----NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55 V+ V +WN+N + R +R+ ++ ++ PD++ LQE + + +QSL + Sbjct: 224 VLRVVSWNINGLTDRPSRLPRTYIHMCDELRSVEPDVVLLQEVEPTYYDHLLLVMQSLGF 283 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL--RIGNLYL 113 I Q A G + + R+ + Sbjct: 284 -IACHDQPRMAAAANPMLAFMFAAAGGGVGMYDMDTNPTRAPPYFTMSFIRRGRLSLMSH 342 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + D + R R + L +Y+ + A Sbjct: 343 RRTPFHNTNMMRDLNTLDVRCDRTMRRLWIGNVHLESCKEYSQQRCQQFTECLQALDRHA 402 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHH--------------LYSFWDYYADS----- 214 + + + + DA +H ++ WD + Sbjct: 403 VGIVIGDTNLRDPEARRTLDAYLTSHPQSGIDDAWLMAGSPPAARWT-WDTRVNDTLDTS 461 Query: 215 -WSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP-SDHTPVIVSLDIPEPRK 268 W R D + ++ R SDH V + + P ++ Sbjct: 462 RWQSRPHARYDRCFV-KGL--KTLEFQLLGTQRKPNGFISDHFGVCIDFEWPPAQR 514 >gi|298374557|ref|ZP_06984515.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_19] gi|298268925|gb|EFI10580.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_19] Length = 365 Score = 61.0 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 42/284 (14%), Positives = 78/284 (27%), Gaps = 43/284 (15%) Query: 3 VVTVATWNV------NSIRARIHNLAAWIKENNPDIICLQET------KTEDKNFPFETL 50 V+ V T+NV N + + + +I ++ DI+CLQE K+ + ++ L Sbjct: 101 VLKVLTYNVMAFGYKNHTKIAPNKIIQYIANSDADIVCLQEYATAKSEKSLTASKIYDAL 160 Query: 51 QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 Y + ++ + + I + L + N Sbjct: 161 SMYPYRSVFYQSSTKFQSFGIAVFSKYPLSNSRMVKYDSDYNGSSVHEVNIKGKKLTLIN 220 Query: 111 LYLPHGNPITSTKYDDK-----------ISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159 +L + F + + A I Sbjct: 221 NHLESFKLTMEDRTRYSSLIKSFSSDGLDDLKGAFEQKLGPAFRIRAKQAEAVSEEIKNA 280 Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK 219 D ND + R L + + + ++ Sbjct: 281 KGDYVLVCGDFNDTPISYAHRTIQGDLTDAFAESGRGMGITYNQNFFWF----------- 329 Query: 220 GIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 RID+I+ SP TS + +D SDH P+ L + Sbjct: 330 --RIDNILHSPNMTS--MNCSVDKVAY-----SDHYPLWCYLKL 364 >gi|17510359|ref|NP_493461.1| hypothetical protein Y63D3A.4 [Caenorhabditis elegans] gi|75028976|sp|Q9XWG3|TDP2_CAEEL RecName: Full=5'-tyrosyl-DNA phosphodiesterase; Short=5'-Tyr-DNA phosphodiesterase gi|3881233|emb|CAA21707.1| C. elegans protein Y63D3A.4, confirmed by transcript evidence [Caenorhabditis elegans] Length = 362 Score = 61.0 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 43/272 (15%), Positives = 79/272 (29%), Gaps = 49/272 (18%) Query: 6 VATWNVNSI--RA---RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 V +WN++ + R+ R+ +A +K NPDI+ LQE + P + LQSL Y I Sbjct: 122 VMSWNIDGLDGRSLLTRMKAVAHIVKNVNPDILFLQEV-VDRDLAPIDKLQSL-YKIYYS 179 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + AIL + ++ H + + L++ L + Sbjct: 180 NKGCQYYTAILVS-KMFDVEKHDVIHFQNSGMYRTLQILEGSIGGLKVFLLNTHLESTRE 238 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + F GD N+ + Sbjct: 239 HRPQRCAQFGFCMDKVREIIAQNPGALVFFGGDLNLRDEEVS------------------ 280 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG--IRIDHIMLSPEA------ 232 ++ + A D +++ + D+ G +R D + S Sbjct: 281 ----RVPDGVKDAWEAAGSDNKTKFTWDTFKNDNKQGFHGAKMRFDRLYWSGPLDKVKFT 336 Query: 233 ---TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + S PSDH + + Sbjct: 337 LEGRQRIRSC--------LCFPSDHWAINATF 360 >gi|265762754|ref|ZP_06091322.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|263255362|gb|EEZ26708.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] Length = 285 Score = 61.0 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 39/275 (14%), Positives = 81/275 (29%), Gaps = 33/275 (12%) Query: 4 VTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL- 53 V VAT+N+ NS + R + +I+E +PD++ +QE + + L L Sbjct: 27 VRVATFNIRYDNPGDSLNSWKYRKEKVCEFIREKHPDVLGMQEV--LNHQL-KDLLSGLP 83 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTH----LPGDDLDVQARFIEATFTINTQTLRIG 109 +Y G++ + + + + + + Sbjct: 84 DYAYVGVGREDGKTQGEYAPVFYRKDKYDLLDSNTFWLSEHPDSIGKLGWDAACTRVATW 143 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 + + R S L +++ AG ++ + + Sbjct: 144 AKLKDKTTGKEFLMLNTHFDHVGTEARRNSALLIIDKIKEIAGTHSAMMTGDFNVSEEWE 203 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDY-YADSWSKNKGIRIDHIML 228 + E + Y+F D+ + K ID I + Sbjct: 204 AYKTITSNEFVLKDAWKIAGK---------QSGENYTFHDFGRVPVAEREK---IDFIFV 251 Query: 229 SPEATSLLHSARID-TKPRGWTKPSDHTPVIVSLD 262 +P+ + A I + T SDH + L+ Sbjct: 252 TPQI--KVADAEIISSAITDSTYLSDHNAHLADLE 284 >gi|241956622|ref|XP_002421031.1| RNA exonuclease, putative; rRNA processing protein, putative [Candida dubliniensis CD36] gi|223644374|emb|CAX41187.1| RNA exonuclease, putative [Candida dubliniensis CD36] Length = 497 Score = 61.0 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 23/177 (12%), Positives = 53/177 (29%), Gaps = 23/177 (12%) Query: 1 MSVVTVATWNV-------------NS------IRARIHNLAAWIKENNPDIICLQET-KT 40 + + + ++N+ N +R++I L +K N DI+CLQE K Sbjct: 90 LPSIKIMSYNILAQTLIRREIYPTNGKILKWSVRSQI--LLDELKHYNADIMCLQEVDKV 147 Query: 41 EDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT 100 + + F L+ L Y + N ++ + + + H LD + Sbjct: 148 QYEGFWVSQLEKLGYSTRFYRNNTKNHGCVIVFREKLFVCKHQSFIRLDQDLNQEASEKQ 207 Query: 101 INTQTL-RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI 156 + + ++ + + + + L + Sbjct: 208 LPPARIATTNIAFMAYLEFTPAFVKEYPCLKETNGFIIGTTHLFWHPFGTYERTRQT 264 >gi|23510348|ref|NP_057698.2| tyrosyl-DNA phosphodiesterase 2 [Homo sapiens] gi|67462008|sp|O95551|TYDP2_HUMAN RecName: Full=Tyrosyl-DNA phosphodiesterase 2; Short=Tyr-DNA phosphodiesterase 2; AltName: Full=5'-tyrosyl-DNA phosphodiesterase; Short=5'-Tyr-DNA phosphodiesterase; AltName: Full=ETS1-associated protein 2; AltName: Full=ETS1-associated protein II; Short=EAPII; AltName: Full=TRAF and TNF receptor-associated protein gi|11493669|gb|AAG35600.1|AF201687_1 ETS1-associated protein 2 [Homo sapiens] gi|4210353|emb|CAA21141.1| TRAF and TNF receptor-associated protein (TTRAP)(EAP2, AD022, MGC9099) [Homo sapiens] gi|8247254|emb|CAB92966.1| TRAF and TNF receptor associated protein [Homo sapiens] gi|17028465|gb|AAH17553.1| TRAF and TNF receptor associated protein [Homo sapiens] gi|47060297|gb|AAT09764.1| TRAF and TNF receptor associated protein [Homo sapiens] gi|83759169|gb|AAI10376.1| TRAF and TNF receptor associated protein [Homo sapiens] gi|167773417|gb|ABZ92143.1| TRAF and TNF receptor associated protein [synthetic construct] gi|306921401|dbj|BAJ17780.1| TRAF and TNF receptor associated protein [synthetic construct] Length = 362 Score = 61.0 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 46/285 (16%), Positives = 82/285 (28%), Gaps = 59/285 (20%) Query: 2 SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 S+ ++ TWN++ + RAR + +++ +PD+I LQE P Sbjct: 112 SMFSLITWNIDGLDLNNLSERAR--GVCSYLALYSPDVIFLQEV------IPP------- 156 Query: 55 YHIETCGQKSYNGVAI-LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 Y+ + S + + I+ L Q + + L + Sbjct: 157 YYSYLKKRSSNYEIITGHEEGYFTAIMLKKSRVKLKSQEIIPFPSTKMMRNLLCVHVNVS 216 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + + ++ + + L+ Q +I+ D Sbjct: 217 GNELCLMTSHLESTRGHAAERMNQLKMVLK-------------KMQEAPESATVIFAGDT 263 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG------IRIDHIM 227 L N H Y+ WD +S N G +R D I Sbjct: 264 NLRDREVTRCGGLPNNIVDVWEFLGKPKHCQYT-WDTQMNS---NLGITAACKLRFDRIF 319 Query: 228 LSPEATSLLHSARIDT---KPRGWTK------PSDHTPVIVSLDI 263 + I G K PSDH ++ +LDI Sbjct: 320 ----FRAAAEEGHIIPRSLDLLGLEKLDCGRFPSDHWGLLCNLDI 360 >gi|224131300|ref|XP_002321050.1| predicted protein [Populus trichocarpa] gi|222861823|gb|EEE99365.1| predicted protein [Populus trichocarpa] Length = 449 Score = 61.0 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 47/284 (16%), Positives = 82/284 (28%), Gaps = 30/284 (10%) Query: 8 TWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNF-----PFETLQSLNYHIETCGQ 62 + N+ S R+ + +KE + DI+ LQ+ K E++ +NY + Sbjct: 164 SVNIKSYRS-TRTVLQVLKELDADILALQDVKAEEEKAMKPLSDLAAALGMNY-VFAESW 221 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 G AILSK+ DD D + + +L H + Sbjct: 222 APEYGNAILSKWPIKRWKVQKIFDDTDFRNVLKATIDVPQAGEVNFHCTHLDHLDENWRM 281 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K D I + L + ++ + D +EV Sbjct: 282 KQIDAIIQSSDAPHILAGGLNSLDETDYSEER-----WTDIVKYYEEMGKPTPKVEVMSF 336 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN------KGIRIDHIMLSPEATSLL 236 + D L + +N G R+D+I+ SP + Sbjct: 337 MKSKHYTDAKDYAGECEAVVIL---------AKGQNVQGTCKYGTRVDYILASPNSPYKF 387 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 SDH V V + + Q+ + +P Sbjct: 388 VPGS--YSVFSSKGTSDHHIVKVDI-VKARCSSQEKVARKKRQP 428 >gi|171780196|ref|ZP_02921100.1| hypothetical protein STRINF_01984 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171281544|gb|EDT46979.1| hypothetical protein STRINF_01984 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 109 Score = 61.0 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 30/75 (40%), Gaps = 10/75 (13%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + +WN++SI A + + + + DII +QETK + LQ L Sbjct: 1 MKLISWNIDSINAALTSDSARAVLSRAVINTLVAEDADIIAIQETKLSANGPTKKHLQIL 60 Query: 54 NYHIETCGQKSYNGV 68 N + + V Sbjct: 61 NDYFPDYDISWRSSV 75 >gi|116254404|ref|YP_770242.1| phosphatase [Rhizobium leguminosarum bv. viciae 3841] gi|115259052|emb|CAK10163.1| putative phosphatase [Rhizobium leguminosarum bv. viciae 3841] Length = 288 Score = 61.0 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 47/301 (15%), Positives = 93/301 (30%), Gaps = 58/301 (19%) Query: 4 VTVATWNVN---SIRARIHNLAAWIKE--NNPDIICLQETKTEDKNFPFETLQSL----- 53 + A++N+ + R A I D+I LQE + F + Sbjct: 1 MNFASYNIQYGFGLDGRYD--LARIARSLEGADVIALQEV---TRGFSRNGFADMAADIA 55 Query: 54 ----NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 +Y + A QP+ G+ + + + + ++ IG Sbjct: 56 SFFPDYFWVYGPACDMHVEADEGGLQPVRGTRFQFGNMVLSRWPIVSTRTLLLPRSRTIG 115 Query: 110 NLYLPHGN-----------------PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG 152 + L G + D++I ++ + ++ L G Sbjct: 116 KINLQRGATEAVIDAPGGAIRVYSVHLDHVSADERIRQLEFLNAHINAFVQEGGSLTGGG 175 Query: 153 DYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHD----------TH 202 ++++ P I+ + + + + R + Sbjct: 176 EFDLPEPPLPEDYVIMGDFNMEPESPEYCALAGAGGGYYGRVARIGTPVDAFAALKTYSP 235 Query: 203 HLYSFWDYYADSWSKNKGIR--IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 YS+ D ++ G R +D+ +S S L SA IDT+ G SDH P+ V Sbjct: 236 ESYSWMD------PEDHGKRMHLDYCFVSCGLQSRLKSAWIDTQSVG----SDHFPLWVE 285 Query: 261 L 261 + Sbjct: 286 I 286 >gi|89900093|ref|YP_522564.1| endonuclease/exonuclease/phosphatase [Rhodoferax ferrireducens T118] gi|89344830|gb|ABD69033.1| Endonuclease/exonuclease/phosphatase [Rhodoferax ferrireducens T118] Length = 252 Score = 61.0 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 39/289 (13%), Positives = 80/289 (27%), Gaps = 53/289 (18%) Query: 1 MSVVTVATWNVN----SI----RARIHNLAAWIKENNPDIICLQETKT---EDKNFPFET 49 M++V VAT+N++ I R IHNL +++ + DI+CLQE + + Sbjct: 1 MNIVRVATYNIHKGVQGIGPQRRLEIHNLGHAVEQLDSDIVCLQEVRLLNRREAQ----- 55 Query: 50 LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 + L+ + + + + + Sbjct: 56 --------HFTRWPELSQAEFLAPEGYEAVYHTNAFTRHGEHGNAMLSRWPVVAYQQEDI 107 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 + + +R L + + +I + Sbjct: 108 S----------------DHRFEQRGLLHVEVLVHGRAVHVVVVHLGLIKASRARQIAQLQ 151 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR-----ID 224 A + + ++ D +L +F + R +D Sbjct: 152 RFVAREVPPMAPLLVAGDFNDWGSLVQRALDATNLKTF----TGARHPTYPARLPLVQLD 207 Query: 225 HIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDS 273 ++ L + R W++ SDH P+I +PE S Sbjct: 208 YVYA-RGLVPLGVQV---PQGRIWSRMSDHLPLIAEFGLPEIEPSPDRS 252 >gi|7023883|dbj|BAA92119.1| unnamed protein product [Homo sapiens] Length = 362 Score = 61.0 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 46/285 (16%), Positives = 82/285 (28%), Gaps = 59/285 (20%) Query: 2 SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 S+ ++ TWN++ + RAR + +++ +PD+I LQE P Sbjct: 112 SMFSLITWNIDGLDLNNLSERAR--GVCSYLALYSPDVIFLQEV------IPP------- 156 Query: 55 YHIETCGQKSYNGVAI-LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 Y+ + S + + I+ L Q + + L + Sbjct: 157 YYSYLKKRSSNYEIITGHEEGYFTAIMLKKSRVKLKSQEIIPFPSTKMMRNLLCVHVNVS 216 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + + ++ + + L+ Q +I+ D Sbjct: 217 GNELCLMTSHLESTRGHAAERMNQLKMVLK-------------KMQEAPESATVIFAGDT 263 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG------IRIDHIM 227 L N H Y+ WD +S N G +R D I Sbjct: 264 NLRDREVTRCGGLPNNIVDVWEFLGKPKHCQYT-WDTQMNS---NLGITAACKLRFDRIF 319 Query: 228 LSPEATSLLHSARIDT---KPRGWTK------PSDHTPVIVSLDI 263 + I G K PSDH ++ +LDI Sbjct: 320 ----FRAAAEEGHIIPRSLDLLGLEKLDCGRFPSDHWGLLCNLDI 360 >gi|7578789|gb|AAF64144.1|AF223469_1 AD022 protein [Homo sapiens] Length = 362 Score = 61.0 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 46/285 (16%), Positives = 82/285 (28%), Gaps = 59/285 (20%) Query: 2 SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 S+ ++ TWN++ + RAR + +++ +PD+I LQE P Sbjct: 112 SMFSLITWNIDGLDLNNLSERAR--GVCSYLALYSPDVIFLQEV------IPP------- 156 Query: 55 YHIETCGQKSYNGVAI-LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 Y+ + S + + I+ L Q + + L + Sbjct: 157 YYSYLKKRSSNYEIITGHEEGYFTAIMLKKSRVKLKSQEIIPFPSTKMMRNLLCVHVNVS 216 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + + ++ + + L+ Q +I+ D Sbjct: 217 GNELCLMTSHLESTRGHAAERMNQLKMVLK-------------KMQEAPESATVIFAGDT 263 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG------IRIDHIM 227 L N H Y+ WD +S N G +R D I Sbjct: 264 NLRDREVTRCGGLPNNIVDVWEFLGKPKHCQYT-WDTQMNS---NLGITAACKLRFDRIF 319 Query: 228 LSPEATSLLHSARIDT---KPRGWTK------PSDHTPVIVSLDI 263 + I G K PSDH ++ +LDI Sbjct: 320 ----FRAAAEEGHIIPRSLDLLGLEKLDCGRFPSDHWGLLCNLDI 360 >gi|298204355|gb|ADI61826.1| endonuclease-reverse transcriptase [Bombyx mori] Length = 988 Score = 61.0 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 49/279 (17%), Positives = 78/279 (27%), Gaps = 22/279 (7%) Query: 5 TVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 + WNV R R+ +A ++E N I+ L ET+ F ET Y + Sbjct: 23 RIGCWNV---RTMTRLERLPQVAKVMQEYNIHILGLSETRWN--GF-GETQCDFGYSLLY 76 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 G++ V R I A F+ + + + Y P + Sbjct: 77 SGKEEDATREYGVGLLLSRSAKSSLLSWKPVSERIICARFSTRVRKVTVIQCYAPTNSAS 136 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 T K Q + + + Y Sbjct: 137 TDVKSQFYEQLGHTLKGIKKQDIVI-LMGDINAKMGNDNVDREYYMGQYGATGTINENGE 195 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + H H ++ D +KN+ IDH+ +S S L Sbjct: 196 LFGDLCSTHGLVIGGTLFKHKECHKVTWIS--PDGKTKNQ---IDHVAISKTWRSSLLDV 250 Query: 240 RIDTKPRGWTKPSDHTPVIVS--LDIPEPRKKQQDSTSQ 276 RG SDH V+ L I P +K + + Sbjct: 251 ---RNKRGADIDSDHHLVVAEVRLKIAVPHRKPDKAARK 286 >gi|218131485|ref|ZP_03460289.1| hypothetical protein BACEGG_03103 [Bacteroides eggerthii DSM 20697] gi|317476445|ref|ZP_07935694.1| endonuclease/Exonuclease/phosphatase [Bacteroides eggerthii 1_2_48FAA] gi|217986417|gb|EEC52754.1| hypothetical protein BACEGG_03103 [Bacteroides eggerthii DSM 20697] gi|316907471|gb|EFV29176.1| endonuclease/Exonuclease/phosphatase [Bacteroides eggerthii 1_2_48FAA] Length = 366 Score = 61.0 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 38/271 (14%), Positives = 81/271 (29%), Gaps = 27/271 (9%) Query: 4 VTVATWNVNSIRARIHN-----LAAWIKENNPDIICLQET-------KTEDKNFPFETLQ 51 + ++N+ + ++KE+N DI+CLQE K+ E L+ Sbjct: 102 IKFLSYNIMGFDGANKRNGKNPILTYLKESNADILCLQEYASDESHRHLTQKDIERE-LK 160 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 YH ++ Y I++ + + ++ T+ + N Sbjct: 161 DYPYHRINVVGSGSGYSNKIACYSKFPILSARVLNYTSNYNGSVLYELKLDEDTITLINN 220 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 +L + K + ++++ L+ + I E Sbjct: 221 HLESNKLTKTDKDIYEDMLK----APEKEKVKSGARLLVRKLAEASAIRAPQADTIAKEI 276 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG---IRIDHIML 228 + + + + ++ S N+ RID+I++ Sbjct: 277 ASSRHPSIIVCGDFNDTPISYTHRVIAQNLNDAFTQ-SGRGLGVSYNQNKFYFRIDNILI 335 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 S S + +D K SDH P+ Sbjct: 336 SKNLQSY--NCTVDQSI----KESDHYPIWC 360 >gi|253563360|ref|ZP_04840817.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|251947136|gb|EES87418.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] Length = 285 Score = 61.0 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 40/277 (14%), Positives = 81/277 (29%), Gaps = 33/277 (11%) Query: 2 SVVTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52 S V VAT+N+ NS + R + +I+E +PD++ +QE + + L Sbjct: 25 SHVRVATFNIRYDNLGDSLNSWKYRKEKVCEFIREKHPDVLGMQEV--LNHQL-KDLLSG 81 Query: 53 L-NYHIETCGQKSYNGVAILSKYQPIEIVTH----LPGDDLDVQARFIEATFTINTQTLR 107 L +Y G++ + + + + + + Sbjct: 82 LPDYAYVGVGREDGKTQGEYAPVFYRKDKYDLLDSNTFWLSEHPDSIGKLGWDAACTRVA 141 Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167 + + R S L +++ AG + + + Sbjct: 142 TWAKLKDKTTGKEFLMLNTHFDHVGTEARRNSALLIIDKIKEIAGTHPAMMTGDFNVSEE 201 Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDY-YADSWSKNKGIRIDHI 226 + E + Y+F D+ + K ID I Sbjct: 202 WEAYKTITSNEFVLKDAWKIAGK---------QSGENYTFHDFGRVPVAEREK---IDFI 249 Query: 227 MLSPEATSLLHSARID-TKPRGWTKPSDHTPVIVSLD 262 ++P+ + A I + T SDH + L+ Sbjct: 250 FVTPQI--KVADAEIISSAITDSTYLSDHNAHLADLE 284 >gi|328708466|ref|XP_003243695.1| PREDICTED: craniofacial development protein 2-like [Acyrthosiphon pisum] Length = 367 Score = 61.0 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 41/270 (15%), Positives = 78/270 (28%), Gaps = 20/270 (7%) Query: 4 VTVATWNVNSI-RA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + +ATWN S+ R NL + II LQE + K L+ Y + G Sbjct: 52 IKIATWNTLSLYRTGACQNLTDVLDTYGIQIIALQEIRWPGKG----QLKVGKYIVYFSG 107 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 + + + + + + L + G Sbjct: 108 MEEGHAFGCGFAVHESLEPYVKEFNPISERITLLRVDTKPLNIILVCVHAPTETGEENMK 167 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAG-DYNIIPQPHDCYNPIIWENDACFTLEVR 180 + + +S I L +L + + G + + +P + + Sbjct: 168 DVFYEDLSQIYDKLPGNVIKLVIGDLNAKCGKETHFMPMIGKESLHETSNGNGLRLISFA 227 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + + H T H ++ D + N+ IDHI++ S + Sbjct: 228 AAKDM-----IISSTTFPHKTIHKATWKS--PDGTTCNQ---IDHILVQKRFRSCIKDI- 276 Query: 241 IDTKPRGWTKPSDHTPVIVSLDIPEPRKKQ 270 RG SDH ++ + K Sbjct: 277 --HSFRGADCDSDHFLLVAKFRLKIQSDKS 304 >gi|260891468|ref|ZP_05902731.1| endonuclease/exonuclease/phosphatase family protein [Leptotrichia hofstadii F0254] gi|260858851|gb|EEX73351.1| endonuclease/exonuclease/phosphatase family protein [Leptotrichia hofstadii F0254] Length = 246 Score = 61.0 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 39/271 (14%), Positives = 73/271 (26%), Gaps = 51/271 (18%) Query: 5 TVATWNV------NSIRARIHNLAAWIKENNPDIICLQET-----KTEDKNFPFETLQSL 53 + T+N+ N L IK PD + LQE ++ ++ + + L Sbjct: 14 KIMTYNIYGGRLTNG-----QKLGESIKPYEPDFVSLQEVDKFTKRSNFRDITSDIAKVL 68 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 Y + + + + + + + Sbjct: 69 GYDYYFFKKSRDYDGGEYGISFISKYPLEKIYTYELPSEGVEKRQLIVAELSKKTFGKKV 128 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 N K K L ++ + ++ +GD+N +P Sbjct: 129 LVMNTHLDFKQQIKP-EEMESLDLLTKFFDKDDIKFLSGDFNFLPT------------TK 175 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 + + + + RID+I S Sbjct: 176 YYGEITKDWRDTYMESNASGVRTLSDP---------------------RIDYIFGSQSKK 214 Query: 234 SLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 + S+ I+ + WTK SDH P I LDI Sbjct: 215 WKVKSSYFINDATQDWTKLSDHLPYITVLDI 245 >gi|332184956|ref|ZP_08386705.1| endonuclease/Exonuclease/phosphatase family protein [Sphingomonas sp. S17] gi|332014680|gb|EGI56736.1| endonuclease/Exonuclease/phosphatase family protein [Sphingomonas sp. S17] Length = 231 Score = 61.0 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 33/264 (12%), Positives = 69/264 (26%), Gaps = 41/264 (15%) Query: 3 VVTVATWNVN-SI----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57 ++ VA++N+ I R + ++E + DI+ LQE Sbjct: 1 MIKVASYNIRKGIGADRRRNPDRILDVLREVDADIVALQE-------------------- 40 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 + P+ ++ + + L + + Sbjct: 41 ------ADRRFGEREGVLPLHLIEDHSDWKPIIYGMKARSLGWHGNTLLVRKSTRVLDFE 94 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 I + + + + A + L +G + + + + Sbjct: 95 AIHLPSLEPRGAVMADLSTDAGILRIVGMHLDLSGLWRRRQAGAILSHLASCLHQHPTVM 154 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 + D R SF R+D IM+SPE + Sbjct: 155 MGDLNEWTRGAGCLRDFARDFTFADTGPSFHARRPIG-------RLDRIMVSPEL--RVM 205 Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261 + + K SDH P+ + Sbjct: 206 ACGVHASATSR-KASDHLPIWAKI 228 >gi|82753625|ref|XP_727754.1| endonuclease/exonuclease/phosphatase [Plasmodium yoelii yoelii str. 17XNL] gi|23483752|gb|EAA19319.1| Endonuclease/Exonuclease/phosphatase family [Plasmodium yoelii yoelii] Length = 277 Score = 61.0 bits (146), Expect = 2e-07, Method: Composition-based stats. Identities = 40/238 (16%), Positives = 70/238 (29%), Gaps = 27/238 (11%) Query: 6 VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + N+N + + I L W+ + +P CLQET +K+ + ++ + G K Sbjct: 17 LISLNINGLNSPIKRHRLTDWLHKQDPTFCCLQETHLREKDRHYLRVKGWKTIFQANGLK 76 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 GVAIL + + I L I + Sbjct: 77 KQAGVAILISDKIDFQPK--------------VIKKDKEGHFILIKGKILQEELSILNIY 122 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + + + + I GD+N D D E + Sbjct: 123 APNARAATFIRDTLVKLKAYIAPHTIIVGDFNTPLSSKDRSWKQKLNRDTVKLTEAMKQM 182 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 TD R + Y+F+ ++SK IDH + + I Sbjct: 183 ------DLTDIYRTFYPKTKRYTFFSAPHGTFSK-----IDHKIGHKTGLNRYKKIEI 229 >gi|290993621|ref|XP_002679431.1| predicted protein [Naegleria gruberi] gi|284093048|gb|EFC46687.1| predicted protein [Naegleria gruberi] Length = 531 Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 40/308 (12%), Positives = 83/308 (26%), Gaps = 48/308 (15%) Query: 2 SVVTVATWNV-----NSIRARIHNLAAWIKENNPDIICLQETKTEDK-------NFPFET 49 + + + ++N+ N I+ R+ + I+ N PD+IC QE + ++K NF Sbjct: 224 TSLKIMSYNIHNYEGNWIK-RLMKMIKVIERNQPDVICFQEVRLDEKKDLKKLNNFHEFI 282 Query: 50 LQS-------------LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDV----QA 92 + L Y P L Sbjct: 283 FEDEYQLIHIKKALSQLGYIHYHSRPAMSYVQPFYMDVPPTMQEEGLAIFSKYPIIEADY 342 Query: 93 RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG 152 + + ++ RI + S D + + L+ Sbjct: 343 TLLYRDLSDSSTHQRICVRARILIPHMNSFITADIFNTHLSLKEHERNQNVLDINRFANL 402 Query: 153 DYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-------DTHHLY 205 + + D + L + +TD+ + + Sbjct: 403 NVESSSSSSGKPTIQVVCGDFNLEPQEAAYSNMLIDGKWTDSYISMRNSLSHTSKLLDEF 462 Query: 206 SFWDYYADSWSKNKGIRIDHIM----------LSPEATSLLHSARIDTKPRGWTKPSDHT 255 + + S + + RID+I+ +S ++ + + PSDH Sbjct: 463 TLANELTFSTNGDYKKRIDYILFRDFGSSIVNVSNFIIDG-KASEYHYENDPYKAPSDHH 521 Query: 256 PVIVSLDI 263 V+ I Sbjct: 522 AVVTEFTI 529 >gi|197120014|ref|YP_002140441.1| endonuclease/exonuclease/phosphatase family protein [Geobacter bemidjiensis Bem] gi|197089374|gb|ACH40645.1| endonuclease/exonuclease/phosphatase family protein [Geobacter bemidjiensis Bem] Length = 249 Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 42/278 (15%), Positives = 75/278 (26%), Gaps = 57/278 (20%) Query: 5 TVATWNVNSIRARI---------HNLAAWIKENNPDIICLQET---KTEDK------NFP 46 T+ T+NV+ R+ +A I PDI+CLQE + + N Sbjct: 9 TIMTYNVH----RLIGNDRHSSAPRIAEVIHTYQPDIVCLQELPGARVRPEVGGACQNLV 64 Query: 47 FE-TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT 105 E L ++ + V + S++ + + + Sbjct: 65 HELALLETGGRHFFLERERWGKVVL-SRFPMRLVQAGGLHPQNRYRTVVPRGVLWVEVDL 123 Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165 G + T + + P+ GD+N +P Sbjct: 124 F--GQKLQVVNVHLGLTPQERNSQVKVLTGPEWLSHPDCRPPVALCGDFNTLPSSTIHKQ 181 Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225 L + H ++F +R DH Sbjct: 182 ----------------LKNALMDEQEKLKFGHNH-----FTFPSKLPM-------VRFDH 213 Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 I +SP+ + I SDH P++V L + Sbjct: 214 IFVSPDLV--VEEELIPRTKLTGA-ASDHLPLVVRLRL 248 >gi|237726359|ref|ZP_04556840.1| conserved hypothetical protein [Bacteroides sp. D4] gi|229434885|gb|EEO44962.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4] Length = 353 Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 39/264 (14%), Positives = 77/264 (29%), Gaps = 19/264 (7%) Query: 2 SVVTVATWNVNSIRARI-----HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56 + + + T+NV+S I A + + D++C QE + + +F + LQ N + Sbjct: 101 NRLKIVTYNVHSFGNEITGFSAKEFAEMMNKEETDVLCFQEYRG-NGDFTEQDLQ--NTY 157 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 +T + Y I + + I A + T+RI N+++ Sbjct: 158 AKTFPYSFIPEGLSQAIYSRYPIKQSQTIEFPNTNNGAIWADLDVKGMTIRIINVHMQTT 217 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 N + + + + L+ + E Sbjct: 218 NFDRMRSKAAQARGAQDEEQERAIYLDYSDNFRENTVRRAGQAEQISSLINATEYPLIVC 277 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 + ++ T Y A + +RID++ S + Sbjct: 278 GDFNDPPGTFTYETLKSGLKDGFQTAGE----GYGATYRGVHHLLRIDYLFHS-TLLEGI 332 Query: 237 HSARIDTKPRGWTKPSDHTPVIVS 260 I SDH PV + Sbjct: 333 KYKVIPYD------MSDHNPVYLE 350 >gi|254472835|ref|ZP_05086234.1| endonuclease/exonuclease/phosphatase [Pseudovibrio sp. JE062] gi|211958299|gb|EEA93500.1| endonuclease/exonuclease/phosphatase [Pseudovibrio sp. JE062] Length = 289 Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 37/297 (12%), Positives = 69/297 (23%), Gaps = 48/297 (16%) Query: 4 VTVATWNVN---SIR-----ARIHNLAAWIKENNPDIICLQET----KTEDKNFP-FETL 50 + + ++N+ I ARI + DII LQE K + N L Sbjct: 1 MKIVSYNIQYGTGIDGKVDLARIAG-----ELEGADIIGLQEVDRFWK-RNGNVDQAAEL 54 Query: 51 QSL--NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108 L Y + + + L T+ + Sbjct: 55 ADLLGGYRWVYGPGLDMDASFHDENGKLVNRRRQHGEMILSKYPIISTRTYPLPKMGSIT 114 Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168 + + L + S L + P + Sbjct: 115 RHAIQAALLEAVIDAPGGPLRVYNTHLFYWSPDFALVQAQFVRDRIKTAPSEGGAWCGGP 174 Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADS-------------W 215 + E + + + + +++ W Sbjct: 175 GIDAHWLNDEPQPTMPTDCILLGDMNNGPGTPVYEVFTGPPSEEGGRVQTLDGFVDPWVW 234 Query: 216 SKNKGI----------RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 N+ + RIDH+ + + +D K SDH PV + L Sbjct: 235 LGNEEMSGKTAHFDTRRIDHVFVGASLRHRIAGMWVDEDA----KGSDHLPVWLELK 287 >gi|158521790|ref|YP_001529660.1| endonuclease/exonuclease/phosphatase [Desulfococcus oleovorans Hxd3] gi|158510616|gb|ABW67583.1| Endonuclease/exonuclease/phosphatase [Desulfococcus oleovorans Hxd3] Length = 261 Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 42/252 (16%), Positives = 65/252 (25%), Gaps = 28/252 (11%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL--NYHIETCGQKSYNGVAILSKY 74 R K+ PD I +QE F L +YH + G + Sbjct: 33 RKPAFVELFKQYRPDFIGMQEV----NGFQAAFFAGLLSDYHAIGKRTPAPAG------W 82 Query: 75 QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRF 134 Q + I H + D F+ T I +P R Sbjct: 83 QDVLIFYHKNWECRDCDRFFLSDTPDI--------PSRMPDSRWPRQCVMGTFEKEGLRM 134 Query: 135 LRFASQRLELEEPLIFAGDYNIIPQPH--DCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192 + + E + + + + P++ D T Sbjct: 135 VCVNTHFDFDEPVQVKSAAILLARLEKFSNTALPVLITGDFNAGPGSDCHRAFTHPGRLT 194 Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPS 252 D + +F + D+ S RID I+ RI T PS Sbjct: 195 RPFFDVFDGDNSGTFHKFTGDAVSD----RIDWILCRNMGGPREK--RIITDRFAGIFPS 248 Query: 253 DHTPVIVSLDIP 264 DH PV + Sbjct: 249 DHFPVYAEFSLD 260 >gi|237712213|ref|ZP_04542694.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|229453534|gb|EEO59255.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] Length = 353 Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 39/264 (14%), Positives = 77/264 (29%), Gaps = 19/264 (7%) Query: 2 SVVTVATWNVNSIRARI-----HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56 + + + T+NV+S I A + + D++C QE + + +F + LQ N + Sbjct: 101 NRLKIVTYNVHSFGNEITGFSAKEFAEMMNKEETDVLCFQEYRG-NGDFTEQDLQ--NTY 157 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 +T + Y I + + I A + T+RI N+++ Sbjct: 158 AKTFPYSFIPEGLSQAIYSRYPIKQSQTIEFPNTNNGAIWADLDVKGMTIRIINVHMQTT 217 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 N + + + + L+ + E Sbjct: 218 NFDRMRSKAAQARGAQDEEQERAIYLDYSDNFRENTVRRAGQAEQISSLINATEYPLIVC 277 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 + ++ T Y A + +RID++ S + Sbjct: 278 GDFNDPPGTFTYETLKSGLKDGFQTAGE----GYGATYRGVHHLLRIDYLFHS-TLLEGI 332 Query: 237 HSARIDTKPRGWTKPSDHTPVIVS 260 I SDH PV + Sbjct: 333 KYKVIPYD------MSDHNPVYLE 350 >gi|34392553|dbj|BAC82605.1| pol-like protein [Tetraodon nigroviridis] Length = 1318 Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 40/261 (15%), Positives = 77/261 (29%), Gaps = 26/261 (9%) Query: 1 MSVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 M V T NVN R + + +++ LQET +++ N + + Sbjct: 22 MESFRVGTLNVNGARVAEKRALVFDTARRKRVEVLFLQETYSDEHNQADWAKEWEGQVVL 81 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + + GV +L + V+ R + T N +T+ N+Y P Sbjct: 82 SHLSTASGGVGLLFLRSFTPT---SVEVEHVVKGRCLLVTACFNERTVVFINVYAPTNGT 138 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + + + + R + + + + Sbjct: 139 ERKSFLEKVSARLNRCGPEDFLIMGGDFNCTECEFVDRNHAEPHPGS------------- 185 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 Q + + G DA R H Y+ W + R+D + + L S Sbjct: 186 QHALKQLVHSHGLVDAWRRMHADCRQYT-WSRLGEDRISMA--RLDRFYVFKHHFNALKS 242 Query: 239 ARIDTKPRGWTKPSDHTPVIV 259 I +DH+ V+ Sbjct: 243 CSI-----TPAGFTDHSLVLC 258 >gi|256833418|ref|YP_003162145.1| Endonuclease/exonuclease/phosphatase [Jonesia denitrificans DSM 20603] gi|256686949|gb|ACV09842.1| Endonuclease/exonuclease/phosphatase [Jonesia denitrificans DSM 20603] Length = 260 Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 34/261 (13%), Positives = 67/261 (25%), Gaps = 21/261 (8%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + VA++NV A L +K + D++ LQE ++F H Sbjct: 19 LRVASYNVKGFAADRRALWQVLKNLDADVLALQE---PPRSFQGPARLRALAHSLHMECV 75 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 G + + + + AR + L + Sbjct: 76 VPGGYPFGGVTTALLVADRISSSVVAAGARVLPWGLPQWWPQLVDRPSWPSRRGFSWVDV 135 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + + L A + + ++ D Sbjct: 136 GNVVVVSAHLGLNPAERVRHGRIIMDAVNEWGSERTIVA--------GDLNEEPGGPVWE 187 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + + +F + A RID I + A + + Sbjct: 188 LCDSLLPDARPRALSASPDVAVTFPSHRAR-------RRIDSIFVPSRA---VVWSFEVR 237 Query: 244 KPRGWTKPSDHTPVIVSLDIP 264 + SDH PV++ +D+P Sbjct: 238 AGAAVSAASDHRPVVIEVDVP 258 >gi|291222560|ref|XP_002731284.1| PREDICTED: Transposon TX1 uncharacterized 149 kDa protein-like [Saccoglossus kowalevskii] Length = 884 Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 38/266 (14%), Positives = 73/266 (27%), Gaps = 35/266 (13%) Query: 2 SVVTVATWNVNSIR---ARIHNLAAWIKENNP-DIICLQETKT--EDKNFPFETLQSLNY 55 S +T +T NVN+ R R ++K N+P D LQET + +D+N + Sbjct: 3 SSITCSTLNVNNCRDSFKRYKTF-EFLKRNHPCDFYLLQETHSLPQDENTWRLIWRGDG- 60 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + + G + GVAIL K + + + + Sbjct: 61 -VFSHGTSNSAGVAILFKPKTKVDIIAKHDVQPGRLIHVHARVNNTPIHIINVYAPTNGP 119 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + ++ + Sbjct: 120 ERLESFQMLKRNLNTLSDDPIIIGGDFNCTTAPDV----------------DRNGGSEPD 163 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 ++ D R H YS+ N +R+D ++ + Sbjct: 164 VRTSNLLSTIMRWFKLVDGWRHYHGDTKQYSW-------GRGNTLVRLDRFYINKHLCNK 216 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 + + I SDH+ V +++ Sbjct: 217 VKTVEIHNSSLAL---SDHSLVFINI 239 >gi|56961986|ref|YP_173708.1| hypothetical protein ABC0204 [Bacillus clausii KSM-K16] gi|56908220|dbj|BAD62747.1| conserved hypothetical protein [Bacillus clausii KSM-K16] Length = 295 Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 40/278 (14%), Positives = 78/278 (28%), Gaps = 34/278 (12%) Query: 4 VTVATWNV----------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFP--FETLQ 51 + V ++N+ +S R + ++++ PDI+ QE E L Sbjct: 35 MKVMSFNLRNSGGNDPSPHSWSERRPTVQSFLETEEPDILGTQE--ALYDQVTHLDEDLP 92 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 + + + T L + +T NT + Sbjct: 93 DYEWIGIGREGGTDGEFMAIYYKSDRFKPTDTGHYWLSDTPDVVGSTSWGNTIPRMVTWA 152 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 + + ++ S++ E + +D PII Sbjct: 153 ---KFEEEATGEQFYFVNTHFDHQSEESRQKSAELIIE-------KINEYDENLPIILTG 202 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRA----THDTHHLYSFWDYYADSWSKNKGIRIDHIM 227 D T + F D ++ ++ ++ + NK ID ++ Sbjct: 203 DFNTTPDSVSHGILTGEGLFEDPWNYAEEKINEELGTFNGFNDPTGGGTDNK---IDWVL 259 Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 + I+ G PSDH PVI + E Sbjct: 260 TKNIFAESI---GINDYRNGEQYPSDHFPVIAEFKLGE 294 >gi|212691340|ref|ZP_03299468.1| hypothetical protein BACDOR_00832 [Bacteroides dorei DSM 17855] gi|265751906|ref|ZP_06087699.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|212666093|gb|EEB26665.1| hypothetical protein BACDOR_00832 [Bacteroides dorei DSM 17855] gi|263236698|gb|EEZ22168.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] Length = 353 Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 39/264 (14%), Positives = 77/264 (29%), Gaps = 19/264 (7%) Query: 2 SVVTVATWNVNSIRARI-----HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56 + + + T+NV+S I A + + D++C QE + + +F + LQ N + Sbjct: 101 NRLKIVTYNVHSFGNEITGFSAKEFAEMMNKEETDVLCFQEYRG-NGDFTEQDLQ--NTY 157 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 +T + Y I + + I A + T+RI N+++ Sbjct: 158 AKTFPYSFIPEGLSQAIYSRYPIKQSQTIEFPNTNNGAIWADLDVKGMTIRIINVHMQTT 217 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 N + + + + L+ + E Sbjct: 218 NFDRMRSKAAQARGAQDEEQERAIYLDYSDNFRENTVRRAGQAEQISSLINATEYPLIVC 277 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 + ++ T Y A + +RID++ S + Sbjct: 278 GDFNDPPGTFTYETLKSGLKDGFQTAGE----GYGATYRGFHHLLRIDYLFHS-TLLEGI 332 Query: 237 HSARIDTKPRGWTKPSDHTPVIVS 260 I SDH PV + Sbjct: 333 KYKVIPYD------MSDHNPVYLE 350 >gi|260063471|ref|YP_003196551.1| hypothetical protein RB2501_01645 [Robiginitalea biformata HTCC2501] gi|88782915|gb|EAR14089.1| hypothetical protein RB2501_01645 [Robiginitalea biformata HTCC2501] Length = 332 Score = 60.6 bits (145), Expect = 2e-07, Method: Composition-based stats. Identities = 45/270 (16%), Positives = 79/270 (29%), Gaps = 47/270 (17%) Query: 4 VTVATWN---V-------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + +A++N V +R + ++ N DI+C QE + + + Sbjct: 97 LRIASFNSGNVLAEADNPAGLRTAMEDI-------NADILCFQEL----ERYGSFDVSRY 145 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 Y + + AI S+Y IV D D I A + T+RI N++L Sbjct: 146 PYRAFSPEIIGKSTQAIFSEYP---IVRSGSIDFPDTSNNAIFADVAVKGDTIRIYNVHL 202 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + + A + + + P P D Sbjct: 203 ESYRIRSERILYREYGGWFLRRFRAVAGQHVSQARLVKAHQQEAPYPTIIC------GDF 256 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 T ++ L +A YS + RID+I+ Sbjct: 257 NATPFSHT-YRILSAGLEDSFGQAGSGIGATYS---------LRGLPYRIDYILADSRM- 305 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + SDH PV+ +L + Sbjct: 306 ------EVLHHKIFDIHLSDHRPVMATLRL 329 >gi|254446687|ref|ZP_05060162.1| endonuclease/exonuclease/phosphatase family [Verrucomicrobiae bacterium DG1235] gi|198256112|gb|EDY80421.1| endonuclease/exonuclease/phosphatase family [Verrucomicrobiae bacterium DG1235] Length = 281 Score = 60.6 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 31/286 (10%), Positives = 70/286 (24%), Gaps = 40/286 (13%) Query: 4 VTVATWNVNSIR----------AR-----IHNLAAWIKENNPDIICLQETKTEDKNFPFE 48 + + T+N+ R AR + +A I+E PDI+ LQE Sbjct: 8 IKLMTFNIAHGRGLSLYQGFSSARTISKNLDRIAHIIREQQPDIVALQEI---------- 57 Query: 49 TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108 + N + L + H + D + ++ ++ Sbjct: 58 -------DASSHWNGHINLLDYLQSATDYPVSIHGIHNRRDGRKPLAYGNAFLSKFPVKD 110 Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168 + + + + + Sbjct: 111 WKVVSFGEKKLGEKGFLEACFLADGTEIDVINLHLDFRSRRTRLRQVDQLIASIHQRSLA 170 Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR-IDHIM 227 + + + + Y ++ ++ + R +D I+ Sbjct: 171 DPYHLPPIICGDFNTSSRSSSDALHQLIERSAGEEDYHYFPKRERTFPAHFPSRGLDFIL 230 Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDS 273 L+ + + SDH PV+ ++ PE S Sbjct: 231 LAAPFE--AENTEVIKS-----FASDHLPVLSTISAPEKWPASDPS 269 >gi|167752898|ref|ZP_02425025.1| hypothetical protein ALIPUT_01160 [Alistipes putredinis DSM 17216] gi|167659967|gb|EDS04097.1| hypothetical protein ALIPUT_01160 [Alistipes putredinis DSM 17216] Length = 385 Score = 60.6 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 37/269 (13%), Positives = 71/269 (26%), Gaps = 24/269 (8%) Query: 4 VTVATWNVNSI-RAR----IHNLAAWIKENNPDIICLQE-----TKTEDKNFPFETLQSL 53 +T+ T+NV S R + I+ NPDI+CLQE +K E+ + L Sbjct: 125 ITLLTFNVRSFYNDRGQWSFDGVTEVIRRVNPDIVCLQEFNRTSSKAEELD---SLLSDY 181 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFI-EATFTINTQTLRIGNLY 112 + + G + + + + Q + T+RI N + Sbjct: 182 DRTVVMEGNRRDPVFPLALYTKYRILGKSHSILGPMKQDGQSVWVDLLVGDDTIRIFNNH 241 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 L ++ + Sbjct: 242 LHSTAITVHDDKYLSEHQFLTDTAGGAKIKNIFRRFRDNSMLRAAQADTIARAIAATPGC 301 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 + + + + Y + +RID+++ S + Sbjct: 302 KIVCGDFNDTPMSYTYRVMAQDLDDAFRASGK--GYSYTFRGFMDV--LRIDYVLYSEDL 357 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 ++ SDH PV+V L Sbjct: 358 E--CLDYQVLYDV----DLSDHYPVVVRL 380 >gi|147832919|emb|CAN70669.1| hypothetical protein VITISV_037506 [Vitis vinifera] Length = 2825 Score = 60.6 bits (145), Expect = 3e-07, Method: Composition-based stats. Identities = 11/38 (28%), Positives = 23/38 (60%), Gaps = 2/38 (5%) Query: 4 VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETK 39 + + +WNV + +R + +++ NPD++ +QETK Sbjct: 621 MKIISWNVRGLGSRNKRRVVKDFLRLENPDVVMIQETK 658 >gi|221116439|ref|XP_002154635.1| PREDICTED: similar to pol-like protein [Hydra magnipapillata] Length = 693 Score = 60.2 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 29/53 (54%), Gaps = 3/53 (5%) Query: 1 MSVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQ 51 M++ + T NVN + ++ + +++K + DI+C+QET + N L+ Sbjct: 1 MAI-KICTLNVNGLNDQVKRGKIMSFLKNLDSDIVCVQETHCTEGNVEKWWLE 52 >gi|23097914|ref|NP_691380.1| hypothetical protein OB0459 [Oceanobacillus iheyensis HTE831] gi|22776138|dbj|BAC12415.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831] Length = 402 Score = 60.2 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 39/257 (15%), Positives = 80/257 (31%), Gaps = 12/257 (4%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQP 76 R+ L ++ E +PDII QE Y G++ + ++ Y Sbjct: 57 RLPVLQEYLLEKDPDIIGTQE--ALYNQVNDVDANLPGYDWIGLGREGGSNGEFMAIYYK 114 Query: 77 IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 + T L D + E T ++ + + T+ ++ + Sbjct: 115 EDRFTPLEYDHYWLSDTPKEIGSTSWGNSIPRMVTWAKFEDKETNKQFYFVNT----HFD 170 Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIR 196 S+ ++ + A N + + + L + A Sbjct: 171 HESENARVKSAELIAERLNDFDEDIPVVLTGDFNTPLESESHQILTADDLFEDPWETAEE 230 Query: 197 ATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTP 256 ++ ++ ++ + NK ID ++ + + S ID PSDH P Sbjct: 231 KINEDLGTFNGFNDATGGGADNK---IDWVL-TKGIDT--KSVEIDNYQNNGYFPSDHYP 284 Query: 257 VIVSLDIPEPRKKQQDS 273 VI L+ E ++ Sbjct: 285 VITELNYLEQEEESSPV 301 >gi|85860240|ref|YP_462442.1| endonuclease/exonuclease/phosphatase family protein [Syntrophus aciditrophicus SB] gi|85723331|gb|ABC78274.1| endonuclease/exonuclease/phosphatase family protein [Syntrophus aciditrophicus SB] Length = 335 Score = 60.2 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 38/277 (13%), Positives = 74/277 (26%), Gaps = 24/277 (8%) Query: 4 VTVATWNVN-SIRA--------RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 + V ++N+ R R + + + + PD++ LQE D Sbjct: 49 LNVMSFNIRRGTRQDGRNHWIYRRNLVREILNQYRPDVLGLQE--ALDFQMSEVCSMLPG 106 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL-RIGNLYL 113 Y G + + + + + RI Sbjct: 107 YEKVGIGNLGGSRGLHNAIFYDATRFLISDEGTFWLSDAPDIPASKGWGNIIPRICTWAR 166 Query: 114 PHGNPITSTKYDDKISWIK-----RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168 Y R + E + I Sbjct: 167 LVEKKSQQAFYFYNTHLDHISLRARKKSVILLTRHIHERPFTEPLVLTGDFNSRERSAAI 226 Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY-SFWDYYADSWSKNKGIRIDHIM 227 L+++ + L + D R + + +F Y + + ID+I Sbjct: 227 QYLKGEVPLKIKIKAKVLNPVPLMDTFRVKYPDNRNIATFHGYRSYFFRFK----IDYIF 282 Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 +S + + A I + G PSDH P++ +D+P Sbjct: 283 VSGS--ARVIDAEIIQRRWGKCYPSDHFPLLAHVDLP 317 >gi|163859167|ref|YP_001633465.1| hypothetical protein Bpet4846 [Bordetella petrii DSM 12804] gi|163262895|emb|CAP45198.1| conserved hypothetical protein [Bordetella petrii] Length = 286 Score = 60.2 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 45/291 (15%), Positives = 92/291 (31%), Gaps = 32/291 (10%) Query: 1 MSVVTVATWNVNSIRA---RIHNLAAW---IKENNPDIICLQETK----------TEDKN 44 MS++ V ++N++ R+ R +L + PD++ LQE + + ++ Sbjct: 1 MSLIRVVSYNIHKGRSSLGRRESLNDLRLGLYGLRPDLVFLQEVQGRNEHISFLDAQHES 60 Query: 45 FPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 + Y +S +G A+LS+Y +E D Q + A ++ + Sbjct: 61 LAAALRLDVAYGCNAIRNRSDHGNALLSRYAIVEHENQDISDHRLEQRGLLHARIQVDGR 120 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 + ++L + + I R + L + + + Sbjct: 121 DVHCFVVHLGLFAGSRTRQIQALTDRISRLVPEGDPILVAGDFNDWGDRLAPLFVQQLGL 180 Query: 165 NPIIWENDACFTLEVRQSFQKL----------QNMGFTDAIRATHDTHHLYSFWDYYADS 214 + E+ + + N Y + Sbjct: 181 YEVFANAPRSHGGELPRLRDSVRRLSNVLRGVPNSVAVLERNNQLGMGGAY-CPLPPPRT 239 Query: 215 WSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 + R+D I + SAR+ R W K SDH P++ L++P Sbjct: 240 FPAVFPWFRLDRIY-QRGFA--VRSARVLRG-REWAKLSDHAPLLAELELP 286 >gi|301623846|ref|XP_002941224.1| PREDICTED: vomeronasal type-2 receptor 26-like [Xenopus (Silurana) tropicalis] Length = 956 Score = 60.2 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 10/90 (11%) Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 Q+ L + DA R + Y++ + ++ RID+ ++ E L++ A+ Sbjct: 550 QAKMHLHKLHLIDAWRYMNPKLRDYTYHSKPFNCYN-----RIDYTFINQEWLHLINKAK 604 Query: 241 IDTKPRGWTKPSDHTPVIVSLDIPEPRKKQ 270 I G SDH PVI IP K + Sbjct: 605 I-----GTPLFSDHAPVITEFTIPNSTKPE 629 >gi|298387677|ref|ZP_06997228.1| transmembrane endonuclease/exonuclease/phosphatase [Bacteroides sp. 1_1_14] gi|298259533|gb|EFI02406.1| transmembrane endonuclease/exonuclease/phosphatase [Bacteroides sp. 1_1_14] Length = 372 Score = 60.2 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 49/273 (17%), Positives = 82/273 (30%), Gaps = 33/273 (12%) Query: 2 SVVTVATWNVNSIR------ARIHNLAAWIKENNPDIICLQETKTEDK---NFPFETLQS 52 S +T+AT+NVNS + +AA++KE DI C QE + + L Sbjct: 114 SALTIATYNVNSFNHEHTGFSC-KQIAAYMKELGVDIFCFQEFGINHEFGIDSLRTVLSE 172 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 Y+ + LS + I + + IN QT+R+ N + Sbjct: 173 WPYYYVPSSPAGESL-LQLSVFSRYPIKEKQLVTYPNSNNCSLWCDIDINDQTIRLFNNH 231 Query: 113 LPHGNPITSTKY------DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 L + + D +R + L A +I P Sbjct: 232 LQTTEVSRNKRKLEKELRADDTDRAERAALTLADGLHENFKKRAAQAEHINQLISASPYP 291 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226 + D H + + ++ +RID+I Sbjct: 292 TLVCGDFNSLPSSYVYQTVKGEKLNDGFQTCGHGYMYTFRYF---------KHLLRIDYI 342 Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 + S E +D SDH PV++ Sbjct: 343 LHSSEFQ------GVDYFSPDLEY-SDHNPVVM 368 >gi|328785734|ref|XP_395633.4| PREDICTED: putative neutral sphingomyelinase-like [Apis mellifera] Length = 393 Score = 60.2 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 46/277 (16%), Positives = 86/277 (31%), Gaps = 24/277 (8%) Query: 3 VVTVATWNVNSI------R-ARIHNLAAWIKENNPDIICLQETKTEDK--NFPFETLQSL 53 ++ + T N I R AR+ +A N DIICLQE + + +T + L Sbjct: 6 LINILTLNCWGIPYVSPNRSARMTAIADKFATENYDIICLQEIWSINDFKMIKAKTQEQL 65 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT---QTLRIGN 110 Y +G+ ILSK+ +++ H + V F L+I N Sbjct: 66 PYSHYFYSGVIGSGLCILSKFPIKDVIFHKWPLNGYVHKIHHGDWFGGKGVGLCKLQIHN 125 Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170 + +Y+ + + G + I P Sbjct: 126 WNVNVYIAHLHAEYNRHNDEYIAHRVLQAFDTAQFIRMTSGGADSTILGGDLNTEPQDLV 185 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM--L 228 + + A + Y+ +A+++ G RIDHI+ Sbjct: 186 YRIICGVAGLTDACSNSSSNLGTNECANN----SYTN-TKHANTFPD--GKRIDHILYQG 238 Query: 229 SPEATSLLHSARI---DTKPRGWTKPSDHTPVIVSLD 262 + + + + + P SDH ++ + Sbjct: 239 TKNVKIEIINFQHPFPNRIPYKNFSYSDHEAIMATFK 275 >gi|302037090|ref|YP_003797412.1| hypothetical protein NIDE1755 [Candidatus Nitrospira defluvii] gi|300605154|emb|CBK41487.1| conserved protein of unknown function, putative Exodeoxyribonuclease [Candidatus Nitrospira defluvii] Length = 258 Score = 60.2 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 34/261 (13%), Positives = 72/261 (27%), Gaps = 32/261 (12%) Query: 3 VVTVATWNVNS-IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ + +WN N +R ++ L N DI +QE + + + + Sbjct: 25 LMRIVSWNCNGALRKKLPQLL----TLNADIYIVQECEKPEGSIDSSYKSWAKGSLWVGS 80 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 K S + G + V + T S Sbjct: 81 NKHRGLGVFSSNAPLAMLDWDGNGLESFVPFTIDNKITALAVWT-----------RHANS 129 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + + ++ GD+N + D ++ +D L Sbjct: 130 PTFRYIGQLW--KYLQVHKTRIENRNMLICGDFNSNAR-WDVWDRWWNHSDVVRELSSIG 186 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 + + + +F+ + + + ID+ S + L S+ I Sbjct: 187 LESVYHHRTGEQQGKESQP-----TFFMHRKLARPYH----IDYAFASKDL---LQSSEI 234 Query: 242 DTK-PRGWTKPSDHTPVIVSL 261 W SDH P++ + Sbjct: 235 SVGRADDWLIFSDHMPIVFDI 255 >gi|71282220|ref|YP_271635.1| endonuclease/exonuclease/phosphatase family protein [Colwellia psychrerythraea 34H] gi|71147960|gb|AAZ28433.1| endonuclease/exonuclease/phosphatase family family [Colwellia psychrerythraea 34H] Length = 334 Score = 60.2 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 48/261 (18%), Positives = 81/261 (31%), Gaps = 40/261 (15%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQE-TKTEDKNFPFETLQSLNYHIETC 60 S + V T+N+ L +K PDI+ LQE K E L Y+ E Sbjct: 106 SQIKVITFNIGG--GSKDELQLLVKYMKPDILLLQEALKVN-----LEVLFDQRYYSE-- 156 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +G+ ILSK+ + L + N++L + Sbjct: 157 ---CISGLCILSKFPFQQTNRLNRKMFGGWGTFATFYNVITPYGELSLANIHLETPRSVL 213 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 +++ LE+ ++A + I D + Sbjct: 214 MGAIYRHPDQQLAESTESNRELEVNLLNLWATNR----------PYTIIAGDFNMPADEN 263 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 Q + ++ Y+ W G RIDHI+ S + L S Sbjct: 264 LYQQNFSLLNNVIEVKGFAFNRTKYTSW----------HGARIDHILYSDDI--SLSSVE 311 Query: 241 IDTKPRGWTKPSDHTPVIVSL 261 + + +G DH PV+ +L Sbjct: 312 VVERVKG-----DHRPVMATL 327 >gi|256822581|ref|YP_003146544.1| endonuclease/exonuclease/phosphatase [Kangiella koreensis DSM 16069] gi|256796120|gb|ACV26776.1| Endonuclease/exonuclease/phosphatase [Kangiella koreensis DSM 16069] Length = 248 Score = 60.2 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 36/270 (13%), Positives = 76/270 (28%), Gaps = 34/270 (12%) Query: 4 VTVATWNVN---SI--RARIHNLAAWIKENNPDIICLQET-----KTEDKNFPFETLQSL 53 + V T+N++ + R R + ++ + DII LQE ++ + N E ++L Sbjct: 3 LKVITYNIHRAIGVDRRFRPERIVEILESYDADIIALQEVDDGVPRSRELNLAKELAEAL 62 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 + V++ + ++ P I+ Q I Sbjct: 63 D----FPYYVLGKNVSLKKGHYGNATLSRYPIVRERNIDLTIDNKKRRGCQHTTI----- 113 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + +S + + L +++ + + + I ND Sbjct: 114 ---DIPSSPSKEVHLEVFNLHLGLSAKERDKQIQKLLHSSEYNKLNEDSNKLIIGDFNDW 170 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 L + + + Y + +D I + Sbjct: 171 RSLLRKPLTEEAGFLCATDRRYKNKVSALKTYPSFSPRGG---------LDRIFYQGDL- 220 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 L + + K SDH PVI + Sbjct: 221 -KLKNVFLCRKKLSKV-ASDHKPVIAEFKL 248 >gi|147823103|emb|CAN66330.1| hypothetical protein VITISV_000598 [Vitis vinifera] Length = 2691 Score = 60.2 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 22/38 (57%), Gaps = 2/38 (5%) Query: 4 VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETK 39 + + +WN+ + +R + +++ NPD++ QETK Sbjct: 1545 MKIISWNIRGLGSRTKRRVVKDFLRLQNPDVVMFQETK 1582 >gi|226372636|gb|ACO51943.1| LINE-1 reverse transcriptase homolog [Rana catesbeiana] Length = 237 Score = 60.2 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 35/250 (14%), Positives = 84/250 (33%), Gaps = 27/250 (10%) Query: 1 MSVVTVATWNV---NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN-YH 56 M+ + V + NV NSI R L + K + ++I +QET + + Sbjct: 1 MA-LKVYSCNVKGLNSIGKRWQALKEF-KSSKAEVIMVQETH----------FKPSGSFK 48 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 + + S + I+ + + + + + + + +L Sbjct: 49 FASRHFPIAYTASDPSGKVGVAILIKRTS-----PIKILSSYLDPHGRFIFLKCSHLSTS 103 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + + + F + + +I GD+N+ P + + Sbjct: 104 FSLINIYAPNVGQIGFLEKVFEKLQPFSQSFMIMGGDFNVCMSPTRDRKTLFQTTSQSSS 163 Query: 177 LE-VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 + + +++ D+ R H T Y+F+ + S+S R+D+ +++ Sbjct: 164 KKLSTSFRKLVRSHNLFDSWRIKHPTQKHYTFYSHPHKSYS-----RLDYFLITGPLLPY 218 Query: 236 LHSARIDTKP 245 + S+ I Sbjct: 219 VVSSEIIHFI 228 >gi|160885625|ref|ZP_02066628.1| hypothetical protein BACOVA_03628 [Bacteroides ovatus ATCC 8483] gi|156109247|gb|EDO10992.1| hypothetical protein BACOVA_03628 [Bacteroides ovatus ATCC 8483] Length = 316 Score = 60.2 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 45/302 (14%), Positives = 87/302 (28%), Gaps = 45/302 (14%) Query: 2 SVVTVATWNV-----------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETL 50 + +TVA++N+ N R +A ++ ++ DI QE E L Sbjct: 26 TSITVASYNLRNANGGDSINGNGWGQRYPVIAQIVQYHDFDIFGTQECFIHQLKDMKEAL 85 Query: 51 QSLNY-HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 +Y + K + + V L + + Sbjct: 86 PGYDYIGVGRDDGKEKGEHSAIFYRTDKFDVIEKGDFWLSETPDVPSKGWDAVLPRICSW 145 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 + ++ + I + R S L ++ + Sbjct: 146 GHFKCKDTGFEFLFFNLHMDHIGKKARVESAFLVQDKMKELGKGKELP----AILTGDFN 201 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 + + + S L + R + +F ++ +S+++ RIDHI +S Sbjct: 202 VDQTHQSYDAFVSKGVLCDSYEKAGFRYAING----TFNNFDPNSFTE---SRIDHIFVS 254 Query: 230 PEA--------------------TSLLHSA--RIDTKPRGWTKPSDHTPVIVSLDIPEPR 267 P + ID K PSDH PV V L+ + + Sbjct: 255 PSFQVKRYGVLTDTYRSIVGKGEKKQANDCPEEIDIKTYQARTPSDHFPVKVELEFDQRQ 314 Query: 268 KK 269 +K Sbjct: 315 QK 316 >gi|53712613|ref|YP_098605.1| hypothetical protein BF1322 [Bacteroides fragilis YCH46] gi|52215478|dbj|BAD48071.1| conserved hypothetical protein [Bacteroides fragilis YCH46] Length = 285 Score = 60.2 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 39/275 (14%), Positives = 80/275 (29%), Gaps = 33/275 (12%) Query: 4 VTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL- 53 V VAT+N+ NS + R + +I+E +PD++ +QE + + L L Sbjct: 27 VRVATFNIRYDNLGDSLNSWKYRKEKVCEFIREKHPDVLGMQEV--LNHQL-KDLLSGLP 83 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTH----LPGDDLDVQARFIEATFTINTQTLRIG 109 +Y G++ + + + + + + Sbjct: 84 DYAYVGVGREDGKTQGEYAPVFYRKDKYDLLDSNTFWLSEHPDSIGKLGWDAACTRVATW 143 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 + + R S L +++ AG + + + Sbjct: 144 AKLKDKTTGKEFLMLNTHFDHVGTEARRNSALLIIDKIKEIAGTHPAMMTGDFNVSEEWE 203 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDY-YADSWSKNKGIRIDHIML 228 + E + Y+F D+ + K ID I + Sbjct: 204 AYKTITSNEFVLKDAWKIAGK---------QSGENYTFHDFGRVPVAEREK---IDFIFV 251 Query: 229 SPEATSLLHSARID-TKPRGWTKPSDHTPVIVSLD 262 +P+ + A I + T SDH + L+ Sbjct: 252 TPQI--KVADAEIISSAITDSTYLSDHNAHLADLE 284 >gi|224537589|ref|ZP_03678128.1| hypothetical protein BACCELL_02469 [Bacteroides cellulosilyticus DSM 14838] gi|224520786|gb|EEF89891.1| hypothetical protein BACCELL_02469 [Bacteroides cellulosilyticus DSM 14838] Length = 370 Score = 60.2 bits (144), Expect = 3e-07, Method: Composition-based stats. Identities = 35/282 (12%), Positives = 73/282 (25%), Gaps = 37/282 (13%) Query: 2 SVVTVATWNVNSIRARIHN-----LAAWIKENNPDIICLQETKTEDK-----NFPFE-TL 50 + V ++N+ + + ++K + DI+CLQE +T + E L Sbjct: 102 NSFKVLSYNIMGFDGAVKKDGENLILNYLKNSGADILCLQEYQTIESPRYLSQKDVEKAL 161 Query: 51 QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 + YH N + + + + ++ Sbjct: 162 KDYPYH---------NIQIVGRGSGKGHTNRIACYSKFPILSSRTLDYASEYNGSVVYEL 212 Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDY-------NIIPQPHDC 163 + + + + + + S E + +G Sbjct: 213 KMGEDTVMLINNHLESNKLTKEDKVVYESMLKSPETEKVKSGARLLIRKLAEASAIRAPQ 272 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG--- 220 + I E A + + ++ S N+ Sbjct: 273 ADSIAQEIAASRYPYIIVCGDFNDTPISYAHRVIEKGLNDAFT-KSGRGLGISYNQNKFY 331 Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 RID+I+ S + +D K SDH P+ L Sbjct: 332 FRIDNILASKNLKPY--NCTVDRSI----KESDHYPIWCYLK 367 >gi|209551444|ref|YP_002283361.1| endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537200|gb|ACI57135.1| Endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 288 Score = 60.2 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 47/302 (15%), Positives = 95/302 (31%), Gaps = 58/302 (19%) Query: 4 VTVATWNVN---SIRARIHNLAAWIKE--NNPDIICLQETKTEDKNFPFETLQSL----- 53 + A++N+ + R A I D+I LQE + F + Sbjct: 1 MNFASYNIQYGFGLDGRYD--LARIARSLEGADVIALQEV---TRGFSRNGFADMTADLA 55 Query: 54 ----NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 +Y + A QP+ G+ + + + + ++ IG Sbjct: 56 ACFPDYFWVYGPACDIHVEAGEGGRQPVRGTRFQFGNMVLSRWPILSTRTLLLPRSRTIG 115 Query: 110 NLYLPHGN-----------------PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG 152 + L G + D++I ++ + ++ L AG Sbjct: 116 KINLQRGATEAVIAVPGGAIRVYSVHLDHVSPDERIRQLQFLNAHINAFVQEGGSLTGAG 175 Query: 153 DYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT----------H 202 ++++ P I+ + + + + R Sbjct: 176 EFDLPEPPLPEDYVILGDFNMEPESPEYCALAGAGGGYYGRVARIGTPVDAFAALEAYGP 235 Query: 203 HLYSFWDYYADSWSKNKGIR--IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 YS+ + ++ G R +D+ +S S L +ARIDT+ G SDH P+ V Sbjct: 236 GSYSWMN------PEDHGERMHLDYCFVSCGLVSRLQAARIDTQSVG----SDHFPLWVE 285 Query: 261 LD 262 ++ Sbjct: 286 IE 287 >gi|262382529|ref|ZP_06075666.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|262295407|gb|EEY83338.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] Length = 365 Score = 60.2 bits (144), Expect = 4e-07, Method: Composition-based stats. Identities = 41/284 (14%), Positives = 78/284 (27%), Gaps = 43/284 (15%) Query: 3 VVTVATWNV------NSIRARIHNLAAWIKENNPDIICLQET------KTEDKNFPFETL 50 V+ V T+NV N + + + +I ++ DI+CLQE K+ + ++ L Sbjct: 101 VLKVLTYNVMAFGYKNHTKIAPNKIIQYIANSDADIVCLQEYATAKSEKSLTASKIYDAL 160 Query: 51 QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 Y + ++ + + I + L + N Sbjct: 161 SMYPYRSVFYQSSTKFQSFGIAVFSKYPLSNSRMVKYDSDYNGSSVHEVNIKGKKLTLIN 220 Query: 111 LYLPHGNPITSTKYDDK-----------ISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159 +L + F + + A I Sbjct: 221 NHLESFKLTMEDRTRYSSLIKSFSSDGLDDLKGAFEQKLGPAFRIRAKQAEAVSEEIKNA 280 Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK 219 + ND + R L + + + ++ Sbjct: 281 KGEYVLVCGDFNDTPISYAHRTIQGDLTDAFAESGRGMGITYNQNFFWF----------- 329 Query: 220 GIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 RID+I+ SP TS + +D SDH P+ L + Sbjct: 330 --RIDNILHSPNMTS--MNCSVDKVAY-----SDHYPLWCCLKL 364 >gi|301162321|emb|CBW21866.1| putative endonuclease/exonuclease/phosphatase family protein [Bacteroides fragilis 638R] Length = 285 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 39/275 (14%), Positives = 80/275 (29%), Gaps = 33/275 (12%) Query: 4 VTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL- 53 V VAT+N+ NS + R + +I+E +PD++ +QE + + L L Sbjct: 27 VRVATFNIRYDNPGDSLNSWKYRKEKVCEFIREKHPDVLGMQEV--LNHQL-KDLLSGLP 83 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTH----LPGDDLDVQARFIEATFTINTQTLRIG 109 +Y G++ + + + + + + Sbjct: 84 DYAYVGVGREDGKTQGEYAPVFYRKDKYDLLDSNTFWLSEHPDSIGKLGWDAACTRVATW 143 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 + + R S L +++ AG + + + Sbjct: 144 AKLKDKTTGKEFLMLNTHFDHVGTEARRNSALLIIDKIKEIAGTHPAMMTGDFNVSEEWE 203 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDY-YADSWSKNKGIRIDHIML 228 + E + Y+F D+ + K ID I + Sbjct: 204 AYKTITSNEFVLKDAWKIAGK---------QSGENYTFHDFGRVPVAEREK---IDFIFV 251 Query: 229 SPEATSLLHSARID-TKPRGWTKPSDHTPVIVSLD 262 +P+ + A I + T SDH + L+ Sbjct: 252 TPQI--KVADAEIISSAITDSTYLSDHNAHLADLE 284 >gi|13473422|ref|NP_104989.1| hypothetical protein mlr4014 [Mesorhizobium loti MAFF303099] gi|14024171|dbj|BAB50775.1| mlr4014 [Mesorhizobium loti MAFF303099] Length = 289 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 34/295 (11%), Positives = 76/295 (25%), Gaps = 44/295 (14%) Query: 4 VTVATWNVN-SIRARIHNLAAWIKENNP----DIICLQE-TKTEDK----NFPFETLQSL 53 + + T+N+ I + + + D++ LQE T+ + + E ++L Sbjct: 1 MKLVTYNIQYGIG--LDGQYDVARIADAVRGADVVALQEVTRNNPRNGGRDMVAEIGEAL 58 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 + G + + T G+ + + + + ++ + Sbjct: 59 PDYFAVYGSNFEANIGSRIENGRAITTTFQLGNMMLSKTPIHLSRNLLLPRSRSFEMMNF 118 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDY------------------- 154 G + +E + F Sbjct: 119 QRGALEALIETPLGFIRFYSIHLDHRSPVERASQIQFLRRRLLNYALEGGALSGVAEIGL 178 Query: 155 -NIIPQPHDCYNPIIWENDACF-------TLEVRQSFQKLQNMGFTDAIRATHDTHHLYS 206 + + + + A+R L S Sbjct: 179 PELPHPEAFVAMGDFNMLAGSPEYVELAGRPDHQFGMPLTADFAVDAAVRLNVTGDDLAS 238 Query: 207 FWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + D + + ++ RID++ S L +D + G SDH PV L Sbjct: 239 WVDPKDPA-NTSRHKRIDYVFTSASPARSLQHLWVDHQATG----SDHLPVWAEL 288 >gi|327281562|ref|XP_003225516.1| PREDICTED: hypothetical protein LOC100561123 [Anolis carolinensis] Length = 2290 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 16/91 (17%) Query: 188 NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRG 247 DA R + Y+F+ +W+ RID I LS + +I +PR Sbjct: 42 EFDLHDAWRYHNQNKRDYTFYSDRHKTWA-----RIDMIWLSNSLCTRTEEIKI--QPRD 94 Query: 248 WTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278 SDH P+ +S++ K+++S M Sbjct: 95 K---SDHCPITISIN------KRRNSYKWRM 116 >gi|260466724|ref|ZP_05812910.1| Endonuclease/exonuclease/phosphatase [Mesorhizobium opportunistum WSM2075] gi|259029454|gb|EEW30744.1| Endonuclease/exonuclease/phosphatase [Mesorhizobium opportunistum WSM2075] Length = 287 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 37/295 (12%), Positives = 70/295 (23%), Gaps = 46/295 (15%) Query: 4 VTVATWNVN---SIRARIHNLAAW--IKEN--NPDIICLQE-TKTEDK----NFPFETLQ 51 + + T+N+ + I E D+I LQE T+ + + E + Sbjct: 1 MKLVTYNIQYGVGL----DGQYDVGRIAETVRGADVIALQEVTRNNPRNGGRDMVAEIGE 56 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 +L + G + + T G+ + + + + ++ + Sbjct: 57 ALPDYFAVYGSNFEANIGSRIEDGRAITTTFQLGNMVLSKTPIHLSRNLLLPRSRSFEMM 116 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDY----------------- 154 G + +E + F Sbjct: 117 NFQRGALEALIETPLGFIRFYSIHLDHRSPVERASQIQFLRQRLLNYALEGGALSGVAEI 176 Query: 155 ---NIIPQPHDCYNPIIWE-----NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYS 206 + F F D L + Sbjct: 177 GLPELPHPEAFVGMGDFNMLAGSPEYVELAGRPDHEFGMPLTADFAVDAAVRLDVADLAT 236 Query: 207 FWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + D ++ RID+I S L +D + G SDH PV L Sbjct: 237 WVDPK-RPEDASRHKRIDYIFTSASLARSLKRLWVDRQAVG----SDHLPVWAEL 286 >gi|110803483|ref|YP_698449.1| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens SM101] gi|110683984|gb|ABG87354.1| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens SM101] Length = 262 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 48/276 (17%), Positives = 81/276 (29%), Gaps = 28/276 (10%) Query: 1 MSVVTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51 M + V T+N+ N R + IK++ PDII +QE + + L Sbjct: 1 MRNLKVMTFNLKYDFKAQDNNEWSQRCLRITKLIKDHLPDIIGIQEGLIHMLDDMDDLLD 60 Query: 52 SLNY---HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108 ++ E G+ +N + L + + ++ ++ Sbjct: 61 EYSWVGEDGEGNGKDEFNAIFFLKNKFEVLEWNQFWLSKTPNIKGSKDFNSSLPRICTKL 120 Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL-EEPLIFAGDYNIIPQPHDCYNPI 167 G I L+ ++ II +CY Sbjct: 121 KLKDKISGLKIDIYNTHLDHESELAREEGIKIILKEVKKNYEIYKTPYIIMGDFNCYLED 180 Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227 N F + + + H Y G ID+I+ Sbjct: 181 NLFNIIREEETNNTCFNVCYDNIKNNILGTFHYFKGGY-------------DGRIIDYIL 227 Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 S E + S ID + W PSDH PVI L++ Sbjct: 228 YSKECE--IKSLNIDDRKINWGYPSDHYPVICELEL 261 >gi|311259807|ref|XP_001928433.2| PREDICTED: tyrosyl-DNA phosphodiesterase 2-like [Sus scrofa] Length = 362 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 45/285 (15%), Positives = 82/285 (28%), Gaps = 59/285 (20%) Query: 2 SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 SV + TWN++ + RAR + +++ +PD+I LQE P Sbjct: 112 SVFSFITWNIDGLDLNSLLERAR--GVCSYLALYSPDVIFLQEV------IPP------- 156 Query: 55 YHIETCGQKSYNGVAIL-SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 Y+ + S + + I+ Q + L + Sbjct: 157 YYTYLKKKASSYEIITGNEEGYFTAIMLKKSRVKFKSQEIIPFPNTKMMRNLLCVHVSVS 216 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + + ++ + + + L+ Q +I+ D Sbjct: 217 GNELCLMTSHLESTRGHAEERMNQLKMVLK-------------KMQEAPESATVIFAGDT 263 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG------IRIDHIM 227 + L N H Y+ WD +S N G +R D I Sbjct: 264 NLRDQEVTKCGGLPNNILDVWEFLGKPKHCQYT-WDTQMNS---NLGIAATCKLRFDRIF 319 Query: 228 LSPEATSLLHSARIDT---KPRGWTK------PSDHTPVIVSLDI 263 + + I G K PSDH ++ +LD+ Sbjct: 320 ----FRAAAEGSHIIPRSLDLLGLEKLDCGRFPSDHWGLLCNLDV 360 >gi|319954572|ref|YP_004165839.1| endonuclease/exonuclease/phosphatase [Cellulophaga algicola DSM 14237] gi|319423232|gb|ADV50341.1| Endonuclease/exonuclease/phosphatase [Cellulophaga algicola DSM 14237] Length = 279 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 35/276 (12%), Positives = 75/276 (27%), Gaps = 42/276 (15%) Query: 6 VATWNV------NSIRA---RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56 + ++N+ + A R + +K +PDI +QE + + L+ + Sbjct: 25 IMSYNIRLDVASDGENAWPLRKDFVIDQLKFYSPDIFGIQEGTPQQTAYLAAQLKDYKFI 84 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 + + V L + + + L+ Sbjct: 85 GVGRDGGDKGEYSAIFYNSSQFTVAEENTFWLSETPTEVSMGWDAACNRVCTYGLFTNKD 144 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLE---------LEEPLIFAGDYNIIPQPHDCYNPI 167 ++ + R +L + P++ GD+N+ P Sbjct: 145 TKEKFWVFNTHLDHKGARARAQGVQLILNKIKEVNTKDYPVVLTGDFNLEPTDEVIATVK 204 Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227 DA + + N RID+I Sbjct: 205 NVLIDAKEVAHLTFGPEGTFNAFKFTTAVK-----------------------RRIDYIF 241 Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 ++P + + + + + PSDH PV + +I Sbjct: 242 IAPNQVN-VTKYAVLSDSKDLKYPSDHLPVYIEFEI 276 >gi|71278943|ref|YP_268710.1| endonuclease/exonuclease/phosphatase family protein [Colwellia psychrerythraea 34H] gi|71144683|gb|AAZ25156.1| endonuclease/exonuclease/phosphatase family protein [Colwellia psychrerythraea 34H] Length = 301 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 50/285 (17%), Positives = 84/285 (29%), Gaps = 34/285 (11%) Query: 4 VTVATWNVNSIRARI-------------HNLAAWIKENNPDIICLQETKTEDKNFPFETL 50 + VA+WN+ A + LA + K+ N D+I LQE E + + + Sbjct: 26 IKVASWNI----AWLGSHEYNHRTDADYKKLAKYAKQLNADVIALQEV--ESEYWARKVF 79 Query: 51 -QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 +Y+ T GVAI D+ ++ T T N +TL + Sbjct: 80 GNDYDYYFSTKDWVQRVGVAIKKSQHFTVEAKEYKALDVGKVRHGMDITLTKNGKTLHLL 139 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 ++L G S + E + + + Q D + Sbjct: 140 AVHLKSGCFAAPLD---SSSVKAMPSTSIKEEKRKEACTKLSKQISPLEQWIDLHASQDA 196 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYY----ADSWSKNKGIRIDH 225 R S + + + W + W IDH Sbjct: 197 AYIVLGDFNRRFSQDIALKYSEDKGLWQALNDDGKETLWTPTMTANSGCWGGYYKEYIDH 256 Query: 226 IMLSPEATSLLHSAR----IDTKPRGWT---KPSDHTPVIVSLDI 263 I+ SP+A + I SDH P+ V + + Sbjct: 257 IIFSPKAKEKYIESSFEQLIFKPKYTKELSRNLSDHCPISVKVKL 301 >gi|147785638|emb|CAN77641.1| hypothetical protein VITISV_007623 [Vitis vinifera] Length = 1284 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 40/263 (15%), Positives = 78/263 (29%), Gaps = 39/263 (14%) Query: 4 VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + +WNV + +R + +++ NPD++ +QETK +N + S Sbjct: 63 MKIISWNVRGLGSRNKRRMVKDFLRSENPDVVMIQETK--KENCDRRFVGS------VWT 114 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 ++ + VA+ I+ +L + I + +L + Sbjct: 115 VRNKDWVALPXSGASGGILIIWDSKNLRREEVVIGSFSVSVKFSLDGCGPLWISAVYGPN 174 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + K W++ F + F + + F E Sbjct: 175 SPSLRKDFWVELFDIYGLTYPLWCVGGDFNVIRRSSEKMGGSSLTPSMRDFDSFIRECEL 234 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT----SLLH 237 L+N FT + R+D + S E L Sbjct: 235 LDPPLRNASFTXSNMQESPVCX------------------RLDRFLYSNEWGLLFPQGLQ 276 Query: 238 SARIDTKPRGWTKPSDHTPVIVS 260 A I + SDH P+++ Sbjct: 277 EALI-------RRTSDHWPIVMD 292 >gi|83409938|emb|CAI64359.1| conserved hypothetical protein [uncultured archaeon] Length = 347 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 41/337 (12%), Positives = 72/337 (21%), Gaps = 82/337 (24%) Query: 1 MSV-VTVATWNVNSIRARIHNLAA-----------------WIKENNPDIICLQETKTED 42 MS + +AT+N + NL + N DI+CLQE ++ Sbjct: 20 MSTKLRIATFN-------LENLDDKPRQTPTLDERIAVMRPQLVRLNADILCLQEVNGQE 72 Query: 43 K------NFPFETL----QSLNYHIETCG-------QKSYNGVAILSKYQPIEIVTHLPG 85 K E L + YH + N V + Sbjct: 73 KTGQPRRLLALEKLVEGTPYVEYHTVSTMTADGTQVYDERNLVILSRYEIVEHHQYKHDH 132 Query: 86 DDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELE 145 + + ++ I + +E + Sbjct: 133 APAPWYQKVTAEPQEEEAKEVK--WERPIQHAKIKLDQNRFFQVINLHLKSRLPSNIEGQ 190 Query: 146 EPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY 205 + F + + A T + + Sbjct: 191 KLNTFTWKTACGWAEGFFVSSMKRVGQALETRMLIDKLFDEDEDALIVVCGDFNAESDEV 250 Query: 206 SFWDYYADSWSKNKG---IR-------------------------IDHIMLSPEATSLLH 237 D + G R IDH+++S Sbjct: 251 PVEAIRGDVENTGNGKLARRALVPCERTIPESSRFSMLYIGQGRMIDHLLVSRSLLPYYT 310 Query: 238 SARIDTKPRGWTKP----------SDHTPVIVSLDIP 264 + I + SDH PVI ++P Sbjct: 311 GSEIHNELLHDESIAFATDKKYPESDHAPVIAKFELP 347 >gi|31652284|emb|CAD92510.1| TRAF and TNF receptor-associated protein (TTRAP)(EAP2, AD022, MGC9099) [Homo sapiens] gi|119575863|gb|EAW55459.1| TRAF and TNF receptor associated protein, isoform CRA_b [Homo sapiens] Length = 304 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 46/285 (16%), Positives = 82/285 (28%), Gaps = 59/285 (20%) Query: 2 SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 S+ ++ TWN++ + RAR + +++ +PD+I LQE P Sbjct: 54 SMFSLITWNIDGLDLNNLSERAR--GVCSYLALYSPDVIFLQEV------IPP------- 98 Query: 55 YHIETCGQKSYNGVAI-LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 Y+ + S + + I+ L Q + + L + Sbjct: 99 YYSYLKKRSSNYEIITGHEEGYFTAIMLKKSRVKLKSQEIIPFPSTKMMRNLLCVHVNVS 158 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + + ++ + + L+ Q +I+ D Sbjct: 159 GNELCLMTSHLESTRGHAAERMNQLKMVLK-------------KMQEAPESATVIFAGDT 205 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG------IRIDHIM 227 L N H Y+ WD +S N G +R D I Sbjct: 206 NLRDREVTRCGGLPNNIVDVWEFLGKPKHCQYT-WDTQMNS---NLGITAACKLRFDRIF 261 Query: 228 LSPEATSLLHSARIDT---KPRGWTK------PSDHTPVIVSLDI 263 + I G K PSDH ++ +LDI Sbjct: 262 ----FRAAAEEGHIIPRSLDLLGLEKLDCGRFPSDHWGLLCNLDI 302 >gi|147801861|emb|CAN65957.1| hypothetical protein VITISV_035610 [Vitis vinifera] Length = 1532 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 28/261 (10%), Positives = 69/261 (26%), Gaps = 37/261 (14%) Query: 5 TVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WN + +R + +++ PDI+ +QETK Sbjct: 508 KIISWNTRGLGSRKKRRVVKDFLRSEKPDIVMIQETK-------------------KAEC 548 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT---FTINTQTLRIGNLYLPHGNPI 119 ++ + +V G + + + + + + G+ Sbjct: 549 DRRFVGSVWTARNKEWVVLPACGASGGILVIWDSKKLLSEEVVLGSFSVSVKFAMDGSEQ 608 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + F + ++ + T + Sbjct: 609 FWLSAVYGPNSTALRKDFWVELSDIFGLSSPCWCVGGDFNVIRRCSEK--LGGGRLTPSM 666 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + ++ D +++ + K R+D + S E L + Sbjct: 667 KDLDDFIRENELIDPPL----RSASFTWSNMQEHPVCK----RLDRFLYSNEWEQLFPQS 718 Query: 240 RIDTKPRGWTKPSDHTPVIVS 260 + PR SDH P+++ Sbjct: 719 LQEVLPR---WTSDHWPIVLE 736 >gi|301060197|ref|ZP_07201064.1| endonuclease/exonuclease/phosphatase family protein [delta proteobacterium NaphS2] gi|300445709|gb|EFK09607.1| endonuclease/exonuclease/phosphatase family protein [delta proteobacterium NaphS2] Length = 250 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 40/259 (15%), Positives = 74/259 (28%), Gaps = 12/259 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + TWN + A + N DI+ +QE E+ P E+ Sbjct: 1 MKIITWNCAG---ALRKKAKELDVLNADILVIQE--CEN---PSESTIEYQKWAGDFLWI 52 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 N L + E + + ++ + T L+LP T T Sbjct: 53 GKNKNKGLGIFPKKENKIKQLDWHGEFEINGLKTKSSSTHWTTEELELFLPFSINSTYTA 112 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH-DCYNPIIWENDACFTLEVRQS 182 + + D + IW+ + Sbjct: 113 LGVWTKGSDDQAFSYIGQFWKYLQIHARDLSYPNTIIIGDFNSNTIWDKKDRWWSHSDIM 172 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 + + + T+++ + ++ + NK ID+ +LS I Sbjct: 173 QELREIKIESAYHYQTNESQGRETTPTFFHR-KNLNKAYHIDYALLSSNILPQSK--VII 229 Query: 243 TKPRGWTKPSDHTPVIVSL 261 K W K SDH P+ V + Sbjct: 230 GKADDWLKISDHVPLSVEI 248 >gi|225464836|ref|XP_002272323.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1140 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 29/259 (11%), Positives = 69/259 (26%), Gaps = 32/259 (12%) Query: 4 VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + +WNV ++ + A I+ D++CLQETK + ++SL + Sbjct: 5 LRILSWNVRGANDSSKRRIIKAVIRSQRVDLLCLQETKIQS--LSEGLVRSLGAGRWSKW 62 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 + + +E + + R N+ T Sbjct: 63 VALDAVGSAG----------GMLVCWDKRSLEVMETEVGKFSVSCRFRNVENGLTWFFTG 112 Query: 122 TKYDDKISWIKRFLRFASQRLE-LEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + E+ GD+N+I + Sbjct: 113 VYGPFSKGDRECLWEELGAIRGLWEDLWCLGGDFNVILSQRERNRQGRLTG--------- 163 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + + + +++ + R+D +++ + + Sbjct: 164 -AMRIFAQTVDELELMDLPMQGGAFTW----SGGRDNQSWARLDRFLVTQQWLEMFSGVA 218 Query: 241 IDTKPRGWTKPSDHTPVIV 259 R DH P+++ Sbjct: 219 QCRLQRPTF---DHFPILL 234 >gi|124009803|ref|ZP_01694472.1| endonuclease/exonuclease/phosphatase [Microscilla marina ATCC 23134] gi|123984211|gb|EAY24567.1| endonuclease/exonuclease/phosphatase [Microscilla marina ATCC 23134] Length = 356 Score = 59.8 bits (143), Expect = 4e-07, Method: Composition-based stats. Identities = 45/313 (14%), Positives = 86/313 (27%), Gaps = 60/313 (19%) Query: 4 VTVATWNV--------------------------NSIRARIHNLAAWIKENNPDIICLQE 37 + V +WNV +SI I +A I + +PDII LQE Sbjct: 45 LKVLSWNVQYMAGKGYVFFYDLLDNSGPDTRPSKDSISLTIKEVARIITQEDPDIILLQE 104 Query: 38 T-----KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIE--IVTHLPGDDLDV 90 +T+ ++ + L L C ++ A + + L Sbjct: 105 IDEGAARTDKED-QLKRLLGLINKAYQCHCSAFYWKASFVPDPHVMGSVGMKLSTISKYK 163 Query: 91 QARFIEATFTINTQTLRIGNLYLPHGNPITSTKYD--------------------DKISW 130 + I + Q + YL T + Sbjct: 164 ISEGIRHQLPLIPQNFLVQQFYLKRAVLETKMPVEGNKDLLVLNTHLSAFAQGTNTMEQQ 223 Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG 190 + + +R + P + GD+N++P + ++ SF Sbjct: 224 VVHVNKMLKERTKQGHPWLLGGDFNLLPVGNAYRTLPKYQKKYYKPKTEIASFFNDYQAV 283 Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 + ++ + ++ ID+I S L I + Sbjct: 284 PNIEQTRGENRAEWFTHFPNDPRVKQPDRT--IDYIFFSKNID--LGKTGI--GQKDTWS 337 Query: 251 PSDHTPVIVSLDI 263 SDH P++ + Sbjct: 338 ISDHLPLMAEFSL 350 >gi|149280306|ref|ZP_01886428.1| endonuclease/exonuclease/phosphatase family protein [Pedobacter sp. BAL39] gi|149228995|gb|EDM34392.1| endonuclease/exonuclease/phosphatase family protein [Pedobacter sp. BAL39] Length = 370 Score = 59.8 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 40/278 (14%), Positives = 76/278 (27%), Gaps = 29/278 (10%) Query: 2 SVVTVATWNVNSIR--------ARIHNLAAWIKENNPDIICLQE--TKTEDKNFP----- 46 SVV + T+NV+ + H + I++ NPDII QE T+ F Sbjct: 104 SVVRMMTYNVHGFKPHEGQEFERVKHQMLKLIEDQNPDIIGFQEYYTR-RRGTFDITDSL 162 Query: 47 FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA-TFTINTQT 105 L++ Y+ + + Y + + + + + ++ + Sbjct: 163 KTILKTPYYYFVSSSENDYEASGLAIFSKYPIVNKGVIPFGNNHIGNGSIFIDVEVHQKK 222 Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165 LR+ N++L + Y K + L Q Sbjct: 223 LRVYNVHLQSISF-DKQDYTYLDKVKKSMDPDLQPSKRIAGMLK-NAFMKRSMQVDLMKA 280 Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225 + + + F Y + + ID+ Sbjct: 281 HMGNCSIPYLIAGDFNDTPASYAATQMTKSLKSTFREKGSGFGQTYNGKFPNFQ---IDY 337 Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 I ++ + K SDH PV L + Sbjct: 338 IAVT-------KDIEVLNHLVIPAKLSDHFPVRSDLRL 368 >gi|297198294|ref|ZP_06915691.1| endonuclease/exonuclease/phosphatase [Streptomyces sviceus ATCC 29083] gi|297147051|gb|EFH28465.1| endonuclease/exonuclease/phosphatase [Streptomyces sviceus ATCC 29083] Length = 377 Score = 59.8 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 44/280 (15%), Positives = 86/280 (30%), Gaps = 42/280 (15%) Query: 4 VTVATWNVN--SIRA---RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 + V TWN+ + R L I E + D++ LQET E ++L +H Sbjct: 125 LRVMTWNLWFGGTKVHDHRAKQL-KVITETDVDVVGLQETYGSAA---EELAEALGWH-- 178 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 ++ + I+S++ ++ GD A + + + + +L + Sbjct: 179 --HHRAGTNLGIISRFPITAVL----GDPDVGFYGAAGARIAVEEREVEVWTAHLDYERY 232 Query: 119 ITSTKYD-DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 +R R+ P++ GD+N A Sbjct: 233 GPYASEPLAHEEVRLAQMRDTLHRIGDSAPVVLVGDFNCPSHLDWPDVEWPVTKAAEEAG 292 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 Q + +++ +A ++ RID ++ + Sbjct: 293 FGDSFRQARPDAVR----------DPGHTWSPVHAHPEPQD---RIDFVL-HRGL--RVL 336 Query: 238 SAR--IDTKPRGW------TKPSDHTPVIVSLDIPEPRKK 269 +R + PR W PSDH VI + + Sbjct: 337 DSRTCVSDTPRTWPDVEDNDWPSDHAAVITTFSLGSGPAP 376 >gi|149175039|ref|ZP_01853662.1| hypothetical protein PM8797T_25206 [Planctomyces maris DSM 8797] gi|148846017|gb|EDL60357.1| hypothetical protein PM8797T_25206 [Planctomyces maris DSM 8797] Length = 321 Score = 59.8 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 46/257 (17%), Positives = 78/257 (30%), Gaps = 18/257 (7%) Query: 17 RIHNLAAWIKENNPDIICLQET--KTEDKNFPFETLQSLNYHIETCGQKSYN---GVAIL 71 R+ L I PD+I QE K E+++ + LQ LNYHIE S N + + Sbjct: 57 RMKLLREQITALQPDLIGFQEAGWKPEEEHQVKQLLQGLNYHIEHESDGSDNKERRLLDV 116 Query: 72 SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWI 131 + + + + + + Sbjct: 117 AVASRWPLKRKAFHSLPGSGKALAVEITAPQPIGRLLFVSTFGTARWQFDRELQRERDAV 176 Query: 132 KRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191 P I AGD++ P ++ + +++ N G Sbjct: 177 ALDRFIREISDPNGFPPIIAGDFDATPDSAGIRYLTGLQSLDGHSTHYYDAWKAAGNRGA 236 Query: 192 TDAIRATHDTHHLYS--FWDYYADSWSKNKGIRIDHIML-SP---EATSLLHSARI-DTK 244 + + FW + RID+I L SP + + S R+ + Sbjct: 237 GPTWTTQNHYAKKTTEQFWH------LSDHHRRIDYIFLGSPHHFRGYARVVSTRVVLNQ 290 Query: 245 PRGWTKPSDHTPVIVSL 261 P G PSDH V+ + Sbjct: 291 PVGKDWPSDHFGVMAEI 307 >gi|330508142|ref|YP_004384570.1| endonuclease/exonuclease/phosphatase family [Methanosaeta concilii GP-6] gi|328928950|gb|AEB68752.1| endonuclease/exonuclease/phosphatase family [Methanosaeta concilii GP-6] Length = 355 Score = 59.8 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 46/339 (13%), Positives = 83/339 (24%), Gaps = 76/339 (22%) Query: 6 VATWNVNSI-----RA-----RIHNLAAWIKENNPDIICLQETKTEDK-------NFPFE 48 +AT+N+ S+ R+ RI L + + DI+CLQE + + Sbjct: 7 IATFNLMSLDDRPDRSPSLDERIPVLRPQLIRLDADILCLQEICAQHERNGRPRLEALDR 66 Query: 49 TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFI------------- 95 L+ Y LS + + + + Q + Sbjct: 67 LLEGTPYESFNRASTVDRDGNYLSHHNLVILSRFDIMEQHQYQHEYAPSPSYKKVTALPE 126 Query: 96 --EATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIF--- 150 EA + + + LP+G + K + + Sbjct: 127 ELEAREISWERPILHAKVRLPNGAVLDVINLHLKSRRPTNIQGHKLSERTWKTAFGWAEG 186 Query: 151 --------------AGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN-------- 188 + I D + + Sbjct: 187 VFISSMKRIGQALETRILIDNLFDDNRCALIAVCGDFNEEFDEVSIEAIRGDVENTGNMD 246 Query: 189 --MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR 246 M YS KG +DHI++S + + + + Sbjct: 247 LAMRVMVPTERNIPEPARYS-------LLHNGKGKMLDHILVSRTMLAFFKGSEVHNELL 299 Query: 247 GWTKP----------SDHTPVIVSLDIPEPRKKQQDSTS 275 SDH PVI ++PE + +TS Sbjct: 300 HDESIVFAPKIFYPESDHAPVIARFELPESDIRWSTTTS 338 >gi|313158069|gb|EFR57474.1| endonuclease/exonuclease/phosphatase family protein [Alistipes sp. HGB5] Length = 297 Score = 59.8 bits (143), Expect = 5e-07, Method: Composition-based stats. Identities = 38/279 (13%), Positives = 73/279 (26%), Gaps = 44/279 (15%) Query: 4 VTVATWNVNSIR--------------ARIHNLAAWIKENNPDIICLQETKTED-----KN 44 + + ++N IR AR I++ PD+I QE + + + Sbjct: 40 LKLLSYN---IRYIGAPGDEGDFAWDARKEASIRMIRDVRPDVIGFQEPRRQQVAYLVEQ 96 Query: 45 FPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 P + + + + + + + L + + + Sbjct: 97 LPEYGHIEMGRDFGAKDDPGEHLMIMYLRERYELLDHGH--YWLSETPDEVSQGWDGRCR 154 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 + + +D + I + R RL +E AG D Sbjct: 155 RVTVWARLRDRATGREFCLFDTHLDHIGKTARLEGARLNVERMRSIAGKRTPQFIVGDMN 214 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRID 224 C + + TD H + K K + ID Sbjct: 215 ATAGTPGGVCLEPYFKWLKSACEEAPLTDPRPTYH--------------GFGKAKPLHID 260 Query: 225 HIM--LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 HI + L + G SDH P++ + Sbjct: 261 HIFYRCAEPLRYQLLDST----GYGVQYLSDHYPIVCTF 295 >gi|291241198|ref|XP_002740507.1| PREDICTED: sphingomyelin phosphodiesterase 2, neutral-like [Saccoglossus kowalevskii] Length = 517 Score = 59.4 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 44/298 (14%), Positives = 91/298 (30%), Gaps = 29/298 (9%) Query: 4 VTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDK-NFPFETLQS-LN 54 + + T N +I + RI ++ I + D++CLQE + + L L Sbjct: 130 LKLLTLNCWAIPFLSKLRKERIRHIGEEISTRDYDVVCLQEVWSSKDFKSLKDMLSDCLP 189 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTH--------LPGDDLDVQARFIEATFTINTQTL 106 Y + + + + SK E+ H + + I + Sbjct: 190 YAYQFHSGVVGSAICVFSKSPITEMFYHKYSANGLPHFWHPGEWLTGSMVGLCRIIHHGI 249 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 +I + K + R ++ ++ + D N++ + Sbjct: 250 KINIYVTHLHEETNAIKKYY---YAHRLIQAYELSQFIKFTTSESSDVNVLMGDFNTEQH 306 Query: 167 IIWENDACFTLEVRQ-SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225 C +E+ + A + ++ D W G RID+ Sbjct: 307 EGGYELICKLIEMNDSWITQQSKANEHSAGITCVSPSNPFTIPDEL-KMWPN--GARIDY 363 Query: 226 IMLSPEATSLLH----SARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMK 279 I + + + + P SDH V +L+I P + Q+ + N + Sbjct: 364 IFYNSSQRYDVKCIETNVTMTKVPGKDYSYSDHEGVATTLEI-MPTENQEKQRTSNSQ 420 >gi|157427810|ref|NP_001098811.1| 5'-tyrosyl-DNA phosphodiesterase [Bos taurus] gi|281312449|sp|A7YWI9|TYDP2_BOVIN RecName: Full=Tyrosyl-DNA phosphodiesterase 2; Short=Tyr-DNA phosphodiesterase 2; AltName: Full=5'-tyrosyl-DNA phosphodiesterase; Short=5'-Tyr-DNA phosphodiesterase; AltName: Full=TRAF and TNF receptor-associated protein gi|157278989|gb|AAI34604.1| TTRAP protein [Bos taurus] gi|296474010|gb|DAA16125.1| 5'-tyrosyl-DNA phosphodiesterase [Bos taurus] Length = 364 Score = 59.4 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 46/282 (16%), Positives = 81/282 (28%), Gaps = 53/282 (18%) Query: 2 SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 SV + TWN++ + RAR + +++ +PD+I LQE P Sbjct: 114 SVFSFITWNIDGLDMNNLLERAR--GVCSYLTLYSPDVIFLQEV------IPP------- 158 Query: 55 YHIETCGQKSYNGVAILSKY-QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 Y+ + S + + I+ Q + L + Sbjct: 159 YYAYLKKKASSYKIITGREEGYFTAIMLKKSRVKFKSQEIIPFPNTQMMRNLLCVHVSVS 218 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + + ++ + K + LE Q +I+ D Sbjct: 219 GNELCLMTSHLESTRGHAKERMNQFKMVLE-------------KMQEAPGSATVIFAGDT 265 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADS---WSKNKGIRIDHIMLSP 230 + L N H Y+ WD +S + N +R D I Sbjct: 266 NLRDQEVTKCGGLPNNILDVWEFLGKPKHCQYT-WDTQMNSNLGIAANCKLRFDRIF--- 321 Query: 231 EATSLLHSARIDT---KPRGWTK------PSDHTPVIVSLDI 263 + I G K PSDH ++ +LD+ Sbjct: 322 -FRAAAEGGHIIPQSLDLLGLEKLDCGRFPSDHWGLLCTLDV 362 >gi|300087680|ref|YP_003758202.1| endonuclease/exonuclease/phosphatase [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527413|gb|ADJ25881.1| Endonuclease/exonuclease/phosphatase [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 654 Score = 59.4 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 44/272 (16%), Positives = 86/272 (31%), Gaps = 57/272 (20%) Query: 4 VTVATWNV-NSIRAR----IHNLAAWIKENNPDIICLQET---KTEDKNFP-FETLQ--- 51 + VAT+N+ N A + LA I+++ D++ LQE + E L Sbjct: 426 LRVATYNLHNGFNAVGKLDLEALAQNIEDSGADVVALQEISRGWLVNGRVDMLEWLSRRL 485 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 + Y+ + + + LP + L ++ FI A ++ ++ + Sbjct: 486 DMPYYFGPSSGPFWGNALLSRYPITSAVNVPLPSEGLPLERSFIAAILQVDGLNFQVIAV 545 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 +L H + + + GD+N P + Sbjct: 546 HLHHVEGDSDI--------RVAQVSALLDFYNRSSRTVIMGDFNAEPNDQEIKLMR---- 593 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 I + + Y+F S + RID+I +SP+ Sbjct: 594 -----------------AAGLRDIMLSLEPPPAYTF-------RSDDLFQRIDYIWVSPD 629 Query: 232 ATSLLHSARIDTKPRGWTK-PSDHTPVIVSLD 262 + ++ R T SDH V+ ++ Sbjct: 630 L--------VWSEVRLITGTASDHRGVVADIE 653 >gi|146299325|ref|YP_001193916.1| endonuclease/exonuclease/phosphatase [Flavobacterium johnsoniae UW101] gi|146153743|gb|ABQ04597.1| Endonuclease/exonuclease/phosphatase [Flavobacterium johnsoniae UW101] Length = 279 Score = 59.4 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 33/273 (12%), Positives = 74/273 (27%), Gaps = 32/273 (11%) Query: 4 VTVATWNV------NSIRARIHNLAAWIKEN----NPDIICLQETKTEDKNFPF--ETLQ 51 + + T+N+ + A + +PDI +QE + L Sbjct: 25 LKIMTYNIRLDVASDGENAWPKR-KDYFTSQIQFYSPDIFGVQE--ATPGQVNYIASALP 81 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 + + + + + V L + + + L Sbjct: 82 NYSKFGVGREEGGLGEACTIYYKKDRFKVLDSNTFWLSETPNVVSRGWDAACNRVCTYGL 141 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 + T ++ + + R +L L + Sbjct: 142 FKDLKTKKTFYVFNLHLDHMGEVARIKGVQLALSKMKELNTKNYPA----------FLMG 191 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN--KGIRIDHIMLS 229 D E Q + + M T + +F + + N + +D+I +S Sbjct: 192 DFNSEPETAQIAEIKKVMDDTKDVSKEKPFGPSGTF-----NDFKHNEPVTLLLDYIFIS 246 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + + + + + PSDH PV + +D Sbjct: 247 KNSGLTVQKHAVLSDSKDLKYPSDHLPVFIEID 279 >gi|328858841|gb|EGG07952.1| hypothetical protein MELLADRAFT_105457 [Melampsora larici-populina 98AG31] Length = 511 Score = 59.4 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 27/104 (25%), Positives = 48/104 (46%), Gaps = 2/104 (1%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDK-NFPFETLQSLNYHIETCG 61 + ++ WNV + A L +++ +PDI+ + ETK + + + Q + Sbjct: 98 IRISAWNVCGVNACDKKGLKTYLQAEDPDIMIMSETKMQAEPDIMHLKHQYRYRYWGGDP 157 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT 105 +K Y GVAILSK++P+ +V LP D + F + Sbjct: 158 KKGYAGVAILSKHKPLNVVYGLPTADDQDSTKGQFTDFHLIGTY 201 >gi|300309579|ref|YP_003773671.1| metal-dependent hydrolase [Herbaspirillum seropedicae SmR1] gi|300072364|gb|ADJ61763.1| metal-dependent hydrolase protein [Herbaspirillum seropedicae SmR1] Length = 265 Score = 59.4 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 37/282 (13%), Positives = 83/282 (29%), Gaps = 42/282 (14%) Query: 4 VTVATWNVN-SI-----RARIHNLAAWIKENNPDIICLQETKTEDK------------NF 45 + VAT+N++ + R RI L + + +PDI+ LQE + Sbjct: 3 LRVATYNIHKGVTSFAGRPRILALKQALAQLDPDILFLQEVQGRHDLNALRHASNWPQQG 62 Query: 46 PFETLQSLNYHIETCGQ----KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI 101 E L +H ++G A++S+++ I D + + Sbjct: 63 QHEYLAGDTHHAAYGMNAVYDHGHHGNALISRFEIASIRNQDVSDHAYESRGILHCVVPV 122 Query: 102 NTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161 + ++L + D I + + L + + + Sbjct: 123 EGVEVHCYVIHLGLFAGGRRRQIDALIQAVSTSSPPDAPLLIAGDFNDWTNQLS------ 176 Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI 221 + + + + + + +F + Sbjct: 177 --RTLYQNLGVTEVFDQPQPNARGVMQGLRRLGGLSA-PIRPARTFPAMMP-------WL 226 Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 R+D I + + +A + W + SDH P++ L + Sbjct: 227 RLDRIYV-RGF--RVETAEVLKDG-PWARLSDHAPIVTELHL 264 >gi|251791676|ref|YP_003006397.1| Endonuclease/exonuclease/phosphatase [Dickeya zeae Ech1591] gi|247540297|gb|ACT08918.1| Endonuclease/exonuclease/phosphatase [Dickeya zeae Ech1591] Length = 287 Score = 59.4 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 40/295 (13%), Positives = 82/295 (27%), Gaps = 46/295 (15%) Query: 4 VTVATWNVN-SI----RARIHNLAAWIKENNPDIICLQET-----KTEDKNFPFETLQSL 53 + + ++N+ + R + +A ++ DIIC+QE ++ + P E L Sbjct: 1 MLIVSYNIQYGLGRDGRYDLARIADEVR--GADIICMQEVERFWQRSGMTDQPAELAALL 58 Query: 54 N-YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 YH + + S + + L + F + + Sbjct: 59 GEYHWVYGANLDMDAGTVSSDGRVVNRRRQFGTLTLSRRPILSSRNFPLPKFGTLTQHSI 118 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 I L L + G + P + + + Sbjct: 119 QQGVLETVIDTGGGAIRVYNTHLSHLCAGTRLPQVDAMLGIFARAPDEGGAWCGGHPDPN 178 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF----WDYYADSWSKNKGI------- 221 + +T + + YS + +++G+ Sbjct: 179 SGWTEGLMPLMPQEM---ILMGDLNCLPDSEEYSRLVGPVSPHHGRLVRHRGLMDAWVAA 235 Query: 222 ---------------RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 RIDH +L+P + +D + +G SDH P+ V L Sbjct: 236 GQPENSGSTHPAVGGRIDHCLLTPLLGLTVRRCWVDIENQG----SDHHPLWVEL 286 >gi|29346594|ref|NP_810097.1| hypothetical protein BT_1184 [Bacteroides thetaiotaomicron VPI-5482] gi|253568042|ref|ZP_04845453.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|29338490|gb|AAO76291.1| putative transmembrane endonuclease/exonuclease [Bacteroides thetaiotaomicron VPI-5482] gi|251842115|gb|EES70195.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] Length = 370 Score = 59.4 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 51/273 (18%), Positives = 85/273 (31%), Gaps = 33/273 (12%) Query: 2 SVVTVATWNVNSIR------ARIHNLAAWIKENNPDIICLQETKTEDK---NFPFETLQS 52 S +T+AT+NVNS + +AA++KE DI C QE + + L Sbjct: 112 SALTIATYNVNSFNHEHTGFSC-KEIAAYMKELGVDIFCFQEFGINHEFGTDSLRTVLSE 170 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 Y+ + L+ + I + + IN QT+R+ N + Sbjct: 171 WPYYYVPSSPAGESL-LQLAVFSRYPIKEKQLVTYPNSNNCSLWCDIDINGQTIRLFNNH 229 Query: 113 LPHGNPITSTKY------DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 L + + D +R + L A +I D P Sbjct: 230 LQTTEVSRNKRKLEKELRADDTDRAERAALTLADGLHENFKKRAAQAEHINQLISDSPYP 289 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226 + D + T ++Y+F +RID+I Sbjct: 290 TLVCGDFNSLPSSYVYQTVKGE--KMNDGFQTCGHGYMYTF-------RYFKHLLRIDYI 340 Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 + S E +D SDH PV++ Sbjct: 341 LHSSEFQ------GVDYFSPDLEY-SDHNPVVM 366 >gi|242007919|ref|XP_002424763.1| TRAF and TNF receptor-associated protein, putative [Pediculus humanus corporis] gi|212508277|gb|EEB12025.1| TRAF and TNF receptor-associated protein, putative [Pediculus humanus corporis] Length = 360 Score = 59.4 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 33/267 (12%), Positives = 83/267 (31%), Gaps = 26/267 (9%) Query: 4 VTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 + +WN++ + + R + I+++ PDI+ QE ++ + + Y Sbjct: 111 MKFLSWNLDGLDVHNLKRRTRAVIKLIQKHEPDIVFFQEV--IPESAEYFITKLPEYKCL 168 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ-TLRIGNLYLPHGN 117 G+ +Y + +L + ++ R + T + L++ N +L Sbjct: 169 KGGEDNYFTMTLLRIFTIFYDNHYIVDYPNTKMDRNLLVTEAHMGKLKLKLLNTHLESTK 228 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + + + L F + + + + P + ++ + Sbjct: 229 EHSEERQQQLSIAFSKCLSFEENSTIIFGGDLNLREKEVK-TPKNFFDLWEFCGSPQQFK 287 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 + N + +Y + ++ K+ +++ E Sbjct: 288 YTWDMTKNSNNSSNFGKFKPKCRFDRIYYRFSNPKRAFPKH------FVLIGSERVPQTQ 341 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDIP 264 S PSDH +IV D+ Sbjct: 342 S-----------FPSDHWGIIVLFDLD 357 >gi|298710453|emb|CBJ25517.1| conserved unknown protein [Ectocarpus siliculosus] Length = 411 Score = 59.4 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 2/52 (3%) Query: 212 ADSWSKNKGIRIDHIMLSPEATSLLHSARID--TKPRGWTKPSDHTPVIVSL 261 A KG+RID+ +LS + ++ R SDH P++++L Sbjct: 358 AMGRYYGKGMRIDYFLLSTALAPRIKEVKVFGSGADRDGFLGSDHCPLMLTL 409 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 13/52 (25%), Positives = 26/52 (50%), Gaps = 4/52 (7%) Query: 5 TVATWNVNSI--RARIH--NLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52 T+ T+N+N R + + +++E+ PD++C QE + K P + Sbjct: 70 TIVTFNLNGASPRLAKNWNEIKGFLEEHKPDLVCFQEVRLPAKGVPKAKKED 121 >gi|190893918|ref|YP_001980460.1| putative phosphatase protein [Rhizobium etli CIAT 652] gi|190699197|gb|ACE93282.1| putative phosphatase protein [Rhizobium etli CIAT 652] Length = 288 Score = 59.4 bits (142), Expect = 5e-07, Method: Composition-based stats. Identities = 42/301 (13%), Positives = 80/301 (26%), Gaps = 58/301 (19%) Query: 4 VTVATWNVN---SI--RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL----- 53 + A++N+ + R + +A + D+I LQE + F + Sbjct: 1 MNFASYNIQYGFGLDGRYDLPRIARSL--EGADVIALQEV---TRGFSRNGFADMVADIA 55 Query: 54 ----NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 +Y + A P+ + G+ + + + ++ +G Sbjct: 56 ALFPDYFWVYGPACDLHVEAPEGGLSPVRGIRFQFGNMVLSRWPIASTRTLLLPRSRTLG 115 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFA---------------SQRLELEEPLIFAGDY 154 + G + ++E G Sbjct: 116 KINPQRGATEAVINAPGGAIRVYSVHLDHVSPDERIRQLQFLNAQINAFVQEGGSLTGAA 175 Query: 155 NIIPQPHDCYNPIIWENDACFTLE--VRQSFQKLQNMGFTDAIRATHD----------TH 202 + D E + + R Sbjct: 176 EFDLPEPPLPEDYVILGDFNMEPESPEYCALAGAAGGYYGRVARIGTPIDAFAALEAYRP 235 Query: 203 HLYSFWDYYADSWSKNKGIR--IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 YS+ + +N G R +D+ +S S L SARIDT+ G SDH P+ V Sbjct: 236 ESYSWMN------PENHGERMHLDYCFVSCGLVSRLQSARIDTQSPG----SDHFPLWVE 285 Query: 261 L 261 + Sbjct: 286 I 286 >gi|253702348|ref|YP_003023537.1| endonuclease/exonuclease/phosphatase [Geobacter sp. M21] gi|251777198|gb|ACT19779.1| Endonuclease/exonuclease/phosphatase [Geobacter sp. M21] Length = 249 Score = 59.4 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 41/279 (14%), Positives = 78/279 (27%), Gaps = 59/279 (21%) Query: 5 TVATWNVNSIRARI---------HNLAAWIKENNPDIICLQE-----TK------TEDKN 44 T+ T+NV+ R+ +A I DI+CLQE + ++ Sbjct: 9 TIMTYNVH----RLIGNDRHSSAPRIAEVIHTYQADIVCLQELPGARVRPEVGGACQNLM 64 Query: 45 FPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 L+S H ++ V + ++ G + R + + + Sbjct: 65 HELALLESGGRHFFLERERWGKVVLSRFPMRLVQ----AGGLHPQNRYRTVVPRGVLWVE 120 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 G + T + + P+ GD+N +P Sbjct: 121 IDLFGQKLQVVNVHLGLTPQERNYQVRVLTGPEWLSHPDCRPPVALCGDFNTLPSSTIHK 180 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRID 224 L + + ++F +R D Sbjct: 181 Q----------------LKNALMDEQEKLKFGH-----NQFTFPSKLPM-------VRFD 212 Query: 225 HIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 HI +SP+ + + I SDH P++V L + Sbjct: 213 HIFVSPDLV--VENELIPRTKLTGA-ASDHLPLVVRLRL 248 >gi|282890589|ref|ZP_06299112.1| hypothetical protein pah_c022o186 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281499586|gb|EFB41882.1| hypothetical protein pah_c022o186 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 330 Score = 59.4 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 52/276 (18%), Positives = 89/276 (32%), Gaps = 28/276 (10%) Query: 4 VTVATWNV------------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51 + + T+NV N R+ + I+E +PDI+ +QE E Sbjct: 62 LRIVTYNVLSNRYDENLEEVNHWSQRLPKIVGLIEEMDPDILGVQE--LYPDQL-KELHA 118 Query: 52 SLN--YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 L Y I + + + T T+ I Sbjct: 119 YLRGAYAFYGKPCVDGEINGIFFRKNRFLVQDRQVWYLDENPKDPSTETLTMLKLKDLIT 178 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 L N + + +K R + Q+ P+I GD N P D + + Sbjct: 179 GKLLAIFNTHLAMQPIEKRELEARLISEHIQKHASHLPIILTGDLNTFPNRPDLIDLPFY 238 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIR---IDH 225 + D + L + + + L + + +F DS K G+ +DH Sbjct: 239 DGD--YILSILKGKKFLNDAKDISLLGHLGPLA---TFTSNGKDSTPFKGIGLPGVFLDH 293 Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 IM+S + +H+ + PSDH PVI + Sbjct: 294 IMVSNDIQVWVHA--VQAGTVEGHFPSDHMPVIADI 327 >gi|297290189|ref|XP_001105245.2| PREDICTED: 5'-tyrosyl-DNA phosphodiesterase-like [Macaca mulatta] Length = 388 Score = 59.4 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 45/285 (15%), Positives = 81/285 (28%), Gaps = 59/285 (20%) Query: 2 SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 S+ TWN++ + RAR + +++ +PD+I LQE P Sbjct: 138 SMFCFITWNIDGLDLNNLSERAR--GVCSYLALYSPDVIFLQEV------IPP------- 182 Query: 55 YHIETCGQKSYNGVAI-LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 Y+ + S + + I+ L Q + + L + Sbjct: 183 YYSYLKKRASDYEIITGHEEGYFTAIMLKKSRVKLKSQEIIPFPSTKMMRNLLCVHVNVS 242 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + + ++ + + L+ Q +I+ D Sbjct: 243 GNELCLMTSHLESTRGHAAERMNQLKMVLK-------------KMQEAPESATVIFAGDT 289 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG------IRIDHIM 227 + L N H Y+ WD +S N G +R D I Sbjct: 290 NLRDQEVTKCGGLPNNIVDVWEFLGKPKHCQYT-WDTQMNS---NLGITAACKLRFDRIF 345 Query: 228 LSPEATSLLHSARIDT---KPRGWTK------PSDHTPVIVSLDI 263 + I G K PSDH ++ +LD+ Sbjct: 346 ----FRAAAEEGHIIPRSLDLLGLEKLDCGRFPSDHWGLLCNLDV 386 >gi|213962631|ref|ZP_03390892.1| endonuclease/exonuclease/phosphatase [Capnocytophaga sputigena Capno] gi|213954626|gb|EEB65947.1| endonuclease/exonuclease/phosphatase [Capnocytophaga sputigena Capno] Length = 274 Score = 59.4 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 40/274 (14%), Positives = 84/274 (30%), Gaps = 34/274 (12%) Query: 4 VTVATWNV------NSIRA-----RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52 ++V T+N+ + + + R + I + NPDI +QE F E S Sbjct: 20 LSVMTYNIRYDNSYDGVNSWTEGNRKEKVFTIINDANPDIFGVQEALAHQLKFLEERFPS 79 Query: 53 LNYH-IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 + K + + + ++ L + RI + Sbjct: 80 YQREGVGRDDGKEAGEHSAIFFKKNRFVLLDKGNFWLSQTPDVPSLGWDAICCN-RICSW 138 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 ++ + + S L L + A + +I Sbjct: 139 VKLKDKKTIFWVFNLHFDHEGKVAQIQSADLVLRKIKEIAKNGKVILMGD---------- 188 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI--RIDHIMLS 229 + QK+ + + + T+ T ++ +F +++ ++ + ID I + Sbjct: 189 --FNLPTEHPAVQKIASQLYDTQLSPTNKTPNMGTF-----NAFKTDEPLKGHIDFIFVQ 241 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + +I PSDH PV V L + Sbjct: 242 KSI--KVKQYKIIETRIDSLYPSDHLPVWVQLQL 273 >gi|164687865|ref|ZP_02211893.1| hypothetical protein CLOBAR_01509 [Clostridium bartlettii DSM 16795] gi|164603140|gb|EDQ96605.1| hypothetical protein CLOBAR_01509 [Clostridium bartlettii DSM 16795] Length = 240 Score = 59.4 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 47/271 (17%), Positives = 89/271 (32%), Gaps = 63/271 (23%) Query: 4 VTVATWNVNSI---RARIHNL--AAWIKENNPDIICLQET----KT--EDKNFPFETLQS 52 + + ++N++S ++K++N DIICLQE K + + E + Sbjct: 22 IKIISYNIHSGTDKNMAPTLFDTINFLKKSNADIICLQEVNESSKVGFQVSSLKEELNMN 81 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 L++ + G+A SKY+ I H+ Q F+ T + + L I N++ Sbjct: 82 LHFGANVVKNNTNYGLATYSKYKIIS-QKHVYLSSTREQRGFLHTTVRVKDKKLHIINIH 140 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 L G+ + ++ ++IK + L E + Sbjct: 141 LGLGDKERKKQINELQNYIKGLKKDYFVVL-----------------------GDFNEGN 177 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 E+ + N D RID++ +S Sbjct: 178 LSLDDEIIIDVAEKLNKSNILTFSTELD---------------------RIDYMFVSNNI 216 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + S + K SDH P++ + I Sbjct: 217 E--VKSYEVLIKNM-----SDHYPIVAKISI 240 >gi|307294159|ref|ZP_07574003.1| Endonuclease/exonuclease/phosphatase [Sphingobium chlorophenolicum L-1] gi|306880310|gb|EFN11527.1| Endonuclease/exonuclease/phosphatase [Sphingobium chlorophenolicum L-1] Length = 244 Score = 59.4 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 36/271 (13%), Positives = 65/271 (23%), Gaps = 48/271 (17%) Query: 1 MSVVTVATWNVNSIRARI--------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52 M V VA++N IR I + + E + DII LQE + Sbjct: 13 MRTVRVASYN---IRKAIGTDRRRVPERVIDVLNELDADIIALQE-----------ADRR 58 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 + S Y+P+ + H+ A + + + Sbjct: 59 FGVRSAALPPWLLESI---SPYKPVPLNVHVDSMGWHGNAILVRKDVEVGAHDVLHLPCL 115 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 P G + D + S ++ + + E Sbjct: 116 EPRGATMAEVTLDKGSLRVFGMHLDLSGLWRRKQAAAVIHAASSRDAMPTVLMGDLNEWS 175 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 A + + + A R+D IM + Sbjct: 176 AERG-CLADFARHYSFAPCGRSFHARRPVA-------------------RLDRIMHCGQL 215 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 L + + SDH P+ + Sbjct: 216 --KLVDCGVHESA-AARRASDHLPIWAEFKL 243 >gi|262037757|ref|ZP_06011199.1| putative endonuclease/exonuclease/phosphatase [Leptotrichia goodfellowii F0264] gi|261748229|gb|EEY35626.1| putative endonuclease/exonuclease/phosphatase [Leptotrichia goodfellowii F0264] Length = 257 Score = 59.4 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 39/270 (14%), Positives = 74/270 (27%), Gaps = 45/270 (16%) Query: 1 MSVVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQET-----KTEDKNFPFETLQSLN 54 ++ T+N+ R A + IK PD I LQE ++ ++ + + Sbjct: 25 FRMM---TYNIYGGRLANGTKIGQSIKRYKPDFIALQEVDKFTKRSNIRDITKDIADEMG 81 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 Y+ + + + + + Sbjct: 82 YNFYYFQKSRDYDSGEFGIAFVSKYPIEKILTYELPSIGIEKRQVIAAKIEKSVFGKTVL 141 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 N K + K + L + + + GD N++P D Sbjct: 142 FINTHLDYKQEAKNDELNSLLIMSE--IAEGDIKFLGGDLNMLPTTEYYNQITQNWKD-- 197 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 ++ + KN+ RID+I+ Sbjct: 198 -------------------------------TYLEGDKAGVRKNEDPRIDYILGDFSTNW 226 Query: 235 LLHSA-RIDTKPRGWTKPSDHTPVIVSLDI 263 L + I+ + WTK SDH P + +DI Sbjct: 227 KLKESFFINDNTQEWTKLSDHLPYMTIVDI 256 >gi|221091679|ref|XP_002170010.1| PREDICTED: similar to pol-like protein [Hydra magnipapillata] Length = 578 Score = 59.4 bits (142), Expect = 6e-07, Method: Composition-based stats. Identities = 38/263 (14%), Positives = 75/263 (28%), Gaps = 33/263 (12%) Query: 1 MSVVTVATWNVNSIRARIH--NLAAWIKENNPDIICLQETKT--EDKNFPFETLQSLNYH 56 M+ + + T NVN + + N+ ++K D ICLQET E + + L Sbjct: 1 MA-LNIVTLNVNGLNDDVKRYNILKYLKLKQYDFICLQETHCSKEKEQLLQTEWKKLTGG 59 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 K+ + + +P + + + I Sbjct: 60 SSIWNCKTSRECGVSILTKTETPFNDVPFEKDGRVIATNILYKNLTIRLFIIY------- 112 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 P + + + + + + + L + + P + N++ Sbjct: 113 GPNDPQRKEYFFASLDKHTKTCDLLILLGDFNMV-----ENPIIDRDGGDLFNRNNSLGK 167 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 D R + ++F + K RID I + + Sbjct: 168 ---VNLQSFCNKYVLCDLYRKVKPFEYGFTF-----EKSDKLYRSRIDRIYT--QIQPTI 217 Query: 237 H-SARIDTKPRGWTKPSDHTPVI 258 + +I T SDH VI Sbjct: 218 EYNCKI-----ADTMLSDHRAVI 235 >gi|218258829|ref|ZP_03475089.1| hypothetical protein PRABACTJOHN_00746 [Parabacteroides johnsonii DSM 18315] gi|218225190|gb|EEC97840.1| hypothetical protein PRABACTJOHN_00746 [Parabacteroides johnsonii DSM 18315] Length = 292 Score = 59.0 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 39/267 (14%), Positives = 74/267 (27%), Gaps = 21/267 (7%) Query: 2 SVVTVATWNV------NSIRA---RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52 S + VAT+N+ + + A R + I+ ++ DI QE K+ + Sbjct: 34 SELNVATFNLRMDTEKDGVNAWPNRKEMVKGLIRFHDFDIFGTQE---GFKHMLDGVAEL 90 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 Y G+ S L + N Sbjct: 91 EGYAYIGAGRDDGEDAGEHSAIFYKTGRFDLLDKGNFWFSE--TPDVPGKGWDATCCNRI 148 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 G + + L+ A I + + Sbjct: 149 CSWGKFRDKESGKVFYFFNSHYDHQGKVARRESSKLLIARIKQIAGTDATVFATGDFNAV 208 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 V + L + + + + T ++ + DS KN RID+I ++ Sbjct: 209 PTDEPMVTLASDGLLLDSYGLSEQPHYGTEG--TYNSFKTDSEMKN---RIDYIWVTKG- 262 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIV 259 + + + + PSDH PV++ Sbjct: 263 -TKVKKYAVLNDMQYGRFPSDHFPVMI 288 >gi|171060370|ref|YP_001792719.1| endonuclease/exonuclease/phosphatase [Leptothrix cholodnii SP-6] gi|170777815|gb|ACB35954.1| Endonuclease/exonuclease/phosphatase [Leptothrix cholodnii SP-6] Length = 358 Score = 59.0 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 43/264 (16%), Positives = 77/264 (29%), Gaps = 21/264 (7%) Query: 4 VTVATWNVNSIRA-RIHNLAAWIKE----NNPDIICLQET-KTEDKNFPFETLQSLNYHI 57 + V T+N+ S RA A I E +NPD+I +Q+ + D + P + Sbjct: 105 LRVMTYNIKSYRADEKPGGYALIAEEVLRHNPDVIVMQDANRLTDGHAPMPEAMKRVFAP 164 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 + VA + + + R T + + + G Sbjct: 165 HQVYMRGQYVVASRHPLRGCRVNPLPEAEHNARYVRCTVRVGTQAVDLVTVHFISPRDGL 224 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + + + + + Sbjct: 225 NAA----RHERLDGVDEWKQNFAVRLKQARQLVRDLTETPLLDSRGMAQPLIVAGDLNAP 280 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 E Q L +G DA + + Y+ +RIDHI++SP+ Sbjct: 281 ESSPVVQSLLALGLRDAWSSAAIGYG-YTH---GHSLRPNIDLLRIDHILVSPQ------ 330 Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261 ++ G T+ S+H PVI L Sbjct: 331 -VGVERTFVGGTEGSEHRPVITDL 353 >gi|50551027|ref|XP_502987.1| YALI0D18458p [Yarrowia lipolytica] gi|49648855|emb|CAG81179.1| YALI0D18458p [Yarrowia lipolytica] Length = 454 Score = 59.0 bits (141), Expect = 6e-07, Method: Composition-based stats. Identities = 44/310 (14%), Positives = 95/310 (30%), Gaps = 39/310 (12%) Query: 4 VTVATWNVNSIRA-------RIHNLAAWIKEN--NPDIICLQETKTEDKNFP------FE 48 V V T N ++ R+ ++A + ++ + DI+CLQE + +F + Sbjct: 51 VRVLTLNCWGLKLVSKLRPLRLEAISAQLAQDGDSYDIVCLQEVWV-ESDFDQIKKACVD 109 Query: 49 TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT---------HLPGDDLDVQARFIEATF 99 Y+ V + + GD ++ Sbjct: 110 HFPYTKYYYSGIIAGPGLAVLSRWPIESAYVHRFGLNGRPSAFFRGDWYVGKSVASATII 169 Query: 100 TINTQTLRIGNLYLPHGNPITSTKYDDKISWI-KRFLRFASQRLELEEPLIFAGDYNIIP 158 + + I N ++ Y + R A + ++ I GD N P Sbjct: 170 HPSNHRIEILNAHMHAPYGPGDANYTCHRTSQAWEMARIAKRSMDAGNLTIVTGDLNSRP 229 Query: 159 QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN 218 + + +S + ++ + +SW + Sbjct: 230 SSLT----HQLFENMALLQDAWESRHGEFSGDLSEMTPEQQIEEAGVTCNS-RLNSWRAS 284 Query: 219 KGI----RIDHIMLSPEATSLLHSARID--TKPRGWTKPSDHTPVIVSLDI-PEPRKKQQ 271 + + R+D+I P + + AR+ K G SDH V ++ P+ + + + Sbjct: 285 RPLSDACRLDYIFFDPS-RATVREARVAFTDKIEGGCSVSDHFGVSAVFELTPQDKSRHR 343 Query: 272 DSTSQNMKPI 281 +S + + Sbjct: 344 KVSSATLTTM 353 >gi|238883107|gb|EEQ46745.1| conserved hypothetical protein [Candida albicans WO-1] Length = 497 Score = 59.0 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 23/177 (12%), Positives = 52/177 (29%), Gaps = 23/177 (12%) Query: 1 MSVVTVATWNV-------------NS------IRARIHNLAAWIKENNPDIICLQET-KT 40 + + + ++N+ N +R++I L +K N DI+CLQE K Sbjct: 90 LPSIKIMSYNILAQTLIRREIYPTNGKILKWSVRSQI--LLDELKHYNADIMCLQEVDKV 147 Query: 41 EDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT 100 + + F L+ L Y + N ++ + H LD + + Sbjct: 148 QYEGFWVSQLEKLGYSTRFYRNNTKNHGCVIVFRDKLFTCKHQSFIRLDQDLNQEASEKS 207 Query: 101 INTQTL-RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI 156 + + ++ + + + + L + Sbjct: 208 LPPARIATTNIAFMAYLEFTPTFIKEYPCLEETNGFIIGTTHLFWHPFGTYERARQT 264 >gi|297197811|ref|ZP_06915208.1| endonuclease/exonuclease/phosphatase [Streptomyces sviceus ATCC 29083] gi|197716600|gb|EDY60634.1| endonuclease/exonuclease/phosphatase [Streptomyces sviceus ATCC 29083] Length = 305 Score = 59.0 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 45/272 (16%), Positives = 86/272 (31%), Gaps = 32/272 (11%) Query: 6 VATWNV--------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57 V T+N+ NS R + +++ P ++ QE + L H Sbjct: 51 VMTFNLRFASTSEPNSWAVRRPVMRQLLRQEAPTVLGTQE---GLYQQLLDIHSDLGAHY 107 Query: 58 ETCGQ-----KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 + G A+ + + V H D T+ + + Sbjct: 108 DWIGTGREGGSHDESTAVFYDTRRLAPVEHDTLWLSDTPRVVGSNTWGAALPRIV---TW 164 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 + + + ++ + ++ A + D +P++ D Sbjct: 165 VRFRDRAAGGREFYVLNTHFDHVSQYARER-------SAQFLSRRIAEFDRTSPVLVTGD 217 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY-SFWDYYADSWSKNKGIRIDHIMLSPE 231 +++ L G D A + LY +F Y + G RID I+ +P Sbjct: 218 FNAEAHDNRAYDTLLATGLVDTWDAAAERSRLYATFHGYRPLTPD---GDRIDWILATPG 274 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + + A I+T PSDH PV +L + Sbjct: 275 --TTVQRAVINTFAMDGQFPSDHLPVQATLTL 304 >gi|38346800|emb|CAD41368.2| OSJNBa0088A01.7 [Oryza sativa Japonica Group] Length = 1324 Score = 59.0 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 34/275 (12%), Positives = 68/275 (24%), Gaps = 42/275 (15%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPD----IICLQETKTEDKNFPFETLQSL--NYHIET 59 + +WNV + + + E D I C QETK + + L Y +++ Sbjct: 459 LLSWNVRGLNSPAK--CTVLHELMVDTACSIACFQETKLRAID---DVLARYLGGYKLDS 513 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 K G ++ L + + + + I +Y P + Sbjct: 514 YAIKPARGTRGGILLLWNSNSINITEVRLRRYSMTAKVSLLHTADSFTISAVYGPTRHRE 573 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + N N Sbjct: 574 KEIFLRQIRRLKPANNEPWLLFGDFNMIYRACDKSNSNINLRRMRRFRAAINHC------ 627 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 ++ H + +++ + +R+D + L Sbjct: 628 --------------ELKEIHLQNRKFTW----TNERRHPTMVRLDRFFCNENW-DLAFGH 668 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDST 274 I T SDH P++ + P+ Q+ T Sbjct: 669 HILHTLSSGT--SDHCPLL----LSNPQGPQRPRT 697 >gi|299067973|emb|CBJ39187.1| putative metal dependent endonuclease/phosphatase [Ralstonia solanacearum CMR15] Length = 248 Score = 59.0 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 37/276 (13%), Positives = 83/276 (30%), Gaps = 46/276 (16%) Query: 1 MSVVTVATWNVN----SI--RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 M + VAT+N++ I R R+H++ + + DI+ LQE + + L + Sbjct: 1 MLRLRVATYNIHKGVTGIARRVRVHDVRQGLHTMDADIVFLQEVQDRNDRLVAAELFDPH 60 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 Y + Y + D + + ++ L I + Sbjct: 61 Y--------TQLRYLATDVYPHTVYGRNAVYDHGHHGNAILSRYPILLSENLDISDHRFE 112 Query: 115 HGNPITSTKY--DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD---CYNPIIW 169 + + ++ + ++ + + +++P + W Sbjct: 113 QRGLLHAVADLGFGEVHLLCAHFGLFARSRRRQAEALIERVCSVVPTDAPLVVAGDFNDW 172 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 N + ++ + + T +H + +R+D I Sbjct: 173 NNRLDRVICQSLGVTEVADKAVSARPLRTFPSHLPW---------------LRLDRIY-- 215 Query: 230 PEATSLLHSARIDTKP----RGWTKPSDHTPVIVSL 261 + ID R W + SDH P++ L Sbjct: 216 ------VRGFEIDRAHALTGRDWAQRSDHVPLLAEL 245 >gi|68473535|ref|XP_719092.1| potential rRNA 3' end processing RNAse Ngl2p [Candida albicans SC5314] gi|46440893|gb|EAL00194.1| potential rRNA 3' end processing RNAse Ngl2p [Candida albicans SC5314] Length = 519 Score = 59.0 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 23/177 (12%), Positives = 52/177 (29%), Gaps = 23/177 (12%) Query: 1 MSVVTVATWNV-------------NS------IRARIHNLAAWIKENNPDIICLQET-KT 40 + + + ++N+ N +R++I L +K N DI+CLQE K Sbjct: 112 LPSIKIMSYNILAQTLIRREIYPTNGKILKWSVRSQI--LLDELKHYNADIMCLQEVDKV 169 Query: 41 EDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT 100 + + F L+ L Y + N ++ + H LD + + Sbjct: 170 QYEGFWVSQLEKLGYSTRFYRNNTKNHGCVIVFRDKLFTCKHQSFIRLDQDLNQEASEKS 229 Query: 101 INTQTL-RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI 156 + + ++ + + + + L + Sbjct: 230 LPPARIATTNIAFMAYLEFTPTFIKEYPCLEETNGFIIGTTHLFWHPFGTYERARQT 286 >gi|150006466|ref|YP_001301210.1| hypothetical protein BVU_3985 [Bacteroides vulgatus ATCC 8482] gi|254881617|ref|ZP_05254327.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|294777013|ref|ZP_06742471.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides vulgatus PC510] gi|319643001|ref|ZP_07997635.1| hypothetical protein HMPREF9011_03236 [Bacteroides sp. 3_1_40A] gi|149934890|gb|ABR41588.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482] gi|254834410|gb|EET14719.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|294449071|gb|EFG17613.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides vulgatus PC510] gi|317385366|gb|EFV66311.1| hypothetical protein HMPREF9011_03236 [Bacteroides sp. 3_1_40A] Length = 353 Score = 59.0 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 38/264 (14%), Positives = 75/264 (28%), Gaps = 19/264 (7%) Query: 2 SVVTVATWNVNSIRARI-----HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56 + + V T+NV+S I A + + D++C QE + + +F + LQ N + Sbjct: 101 NRLKVVTYNVHSFGNEITGFSAKEFAEMMNKEETDVLCFQEYRG-NGDFTEQDLQ--NTY 157 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 + + Y I + + I A + T+RI N+++ Sbjct: 158 AKIFPYSFIPEGLSQAIYSRYPIRQSQTIEFPNTNNGAIWADLDVKGMTIRIINVHMQTT 217 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + + + + L + E Sbjct: 218 SFDRMRSKAAQARGEQDEEQERGIYLGYSDNFRENTVRRAGQAEQISSLINATEYPLIVC 277 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 + + ++ T Y A + +RID++ S + Sbjct: 278 GDFNDPPGTFTYETLKNGLKDGFQTAGE----GYGATYRGFHHLLRIDYLFHS-TLLEGI 332 Query: 237 HSARIDTKPRGWTKPSDHTPVIVS 260 I SDH PV + Sbjct: 333 KYKVIPYD------MSDHNPVYLE 350 >gi|147820649|emb|CAN72097.1| hypothetical protein VITISV_042083 [Vitis vinifera] Length = 1832 Score = 59.0 bits (141), Expect = 7e-07, Method: Composition-based stats. Identities = 28/262 (10%), Positives = 65/262 (24%), Gaps = 58/262 (22%) Query: 1 MSVVTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 M V + +WNV ++ + +I+ D++C+QETK + Sbjct: 906 MKV-KILSWNVRGANDSSKRKVIKTFIRNQRVDLMCIQETKVQ----------------- 947 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + G + + + Sbjct: 948 ----------CMTDSIARSIGSGRFLGWKAVNAEGAFRRFRNVEDGNVXVFTG------- 990 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + EE G + +N ++ + Sbjct: 991 ------------VYDPFSKVEXDALWEEFGAIRGLWEDPWCIGGDFNITLFSRERSGQRR 1038 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLH 237 + + + + + +++ + N+ R+D ++SP Sbjct: 1039 ISSAMRNFAEIVDDLGLVDLPLQGGDFTW-----NGGLNNQTWARLDRFLVSPSWIDQFS 1093 Query: 238 SARIDTKPRGWTKPSDHTPVIV 259 PR SDH P+++ Sbjct: 1094 GINQCRLPR---PVSDHFPIML 1112 >gi|225018561|ref|ZP_03707753.1| hypothetical protein CLOSTMETH_02510 [Clostridium methylpentosum DSM 5476] gi|224948663|gb|EEG29872.1| hypothetical protein CLOSTMETH_02510 [Clostridium methylpentosum DSM 5476] Length = 300 Score = 59.0 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 34/271 (12%), Positives = 81/271 (29%), Gaps = 21/271 (7%) Query: 3 VVTVATWNVN---------SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + ++N+ R + I++++ DII +QE + + L Sbjct: 35 TIQIMSFNLRRDPFYTKRFGWGNRRDGVIEIIRQSDADIIGVQE--MTPE-MKKDLETKL 91 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 + +S + S + + ++ + + Sbjct: 92 DEFSIFGTGRSRKLLGEYSGILVRNETVEVLSNHTFWLSKNPDKQGSHALLAPFPRICTT 151 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII-PQPHDCYNPIIWEND 172 S + + + + +++L + L + DYN P P + Sbjct: 152 IEVYLKRSKQRMRVFNTHFDHISWFARKLSAQTILKYIRDYNSKDPLPVILTGDFNAKPY 211 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 + + S + + A + + Y + + ID+I S + Sbjct: 212 SKAIKMLITSNEYVSLNNIFTAFDISDTYINTYHGFSDRLSKYP------IDYIFFSNDF 265 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 ++ +I PSDH P++ L I Sbjct: 266 V--VNDFQILKNKPNGEYPSDHFPILARLQI 294 >gi|301113944|ref|XP_002998742.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262112043|gb|EEY70095.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 525 Score = 59.0 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 39/307 (12%), Positives = 75/307 (24%), Gaps = 59/307 (19%) Query: 5 TVATWNV-----------NSIR-----ARIHNLAAWIKENNPDIICLQETK--------T 40 + ++NV R R+ +L ++KE DII QE + Sbjct: 229 RILSYNVWNTNPSSDVYGAGRRWDQYAKRLDHLVEFVKEAQADIIGFQEVRYDGVFGDPA 288 Query: 41 EDKNFPFETLQSLNYHIETC--------GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQA 92 + Y S +V Sbjct: 289 NHAQVKHLADRLPGYQYVYQAAMSYINSRMPHERIEEGPSILSRYPVVATDYLLLSRDPN 348 Query: 93 RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG 152 ++ + + + +T ++ + + R + + G Sbjct: 349 DPNDSHQRLCLHAVVDYPRWGEIDVYVTHLSLSERSREQTKVEIWEYMRQGKGKTQVLLG 408 Query: 153 DYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYA 212 D N PQ T +++ ++ ++ + D H ++F Sbjct: 409 DLNSEPQSLGIRFLSGQAELLGQTTDMKDAWLEVHKEAKPRS-TDPDDRQHKFTFPS--- 464 Query: 213 DSWSKNKGIRIDHIMLSPEATSLLHSARID-TKPRGWTK----------------PSDHT 255 N RID ++ + I +P TK SDH Sbjct: 465 ----DNPSKRIDFVLY--RGEGRVKECEIIGQEPTKDTKDFPDDVGMLHASSPVYASDHR 518 Query: 256 PVIVSLD 262 VI Sbjct: 519 GVIAEFK 525 >gi|218462948|ref|ZP_03503039.1| putative phosphatase protein [Rhizobium etli Kim 5] Length = 288 Score = 59.0 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 40/296 (13%), Positives = 78/296 (26%), Gaps = 48/296 (16%) Query: 4 VTVATWNVN---SI--RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL----- 53 + A++N+ + R + +A ++ DII LQE + F + Sbjct: 1 MNFASYNIQYGFGLDGRYDLARIARSLER--ADIIALQEV---TRGFSRNGFADMVAGIA 55 Query: 54 -----NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108 ++ + + G+ + + + + ++ + Sbjct: 56 AFFPDHFWVYGPACDLHVEADQGKSAPAPGT-RFQFGNMVLSRWPIVSTRTLLLPRSRTL 114 Query: 109 GNLYLPHGNPITSTKYD---------DKISWIKRFLRFASQRLELEEPLIF------AGD 153 G + G Q L G Sbjct: 115 GKINPQRGATEAVITVPGGAIRVYSVHLDHVSPDERIRQLQFLNAHINAFVQEGGSLTGA 174 Query: 154 YNIIPQPHDCYNPIIWENDACFTLE--VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYY 211 + D E + + R + Y Sbjct: 175 AEFDLPEPPLPEDYVIMGDFNMEPESPEYCALAGAAGGYYGRVARIGTPVDAFATLEAYR 234 Query: 212 ADSW----SKNKGIR--IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +S+ ++ G R +D+ +S S L SARIDT+ G SDH P+ V + Sbjct: 235 PESYSWMDPEDHGKRMHLDYCFVSCGLVSRLKSARIDTQSVG----SDHFPLWVEI 286 >gi|60683195|ref|YP_213339.1| hypothetical protein BF3749 [Bacteroides fragilis NCTC 9343] gi|60494629|emb|CAH09430.1| putative exported protein [Bacteroides fragilis NCTC 9343] gi|301164714|emb|CBW24273.1| putative exported protein [Bacteroides fragilis 638R] Length = 678 Score = 59.0 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 41/284 (14%), Positives = 73/284 (25%), Gaps = 37/284 (13%) Query: 2 SVVTVATWNVN--SI---RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56 ++V V WN+ I + I+ + D+I +QE SL YH Sbjct: 409 NIVKVLQWNIWHGGIHLGNEGQQRVLDLIRSSRADVIMMQE----AYGIQQMLADSLGYH 464 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 ++T N + LR Sbjct: 465 LKT-HSLKDNLAMYSRFPLEAIAWREPFKSNPAKITLPNGKRIMFVDCWLRYAYRPEYTS 523 Query: 117 NPITSTKYDDKI----------SWIKRFLRFASQRLELEEPLIFAGDYN-IIPQPHDCYN 165 + + + LE + P+I GD+N Sbjct: 524 GYAEKGLDPSVWVAEDSILALPDIRNIYTKDIAPNLETDMPVIVTGDFNSCSHLDWTERA 583 Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG----I 221 + + + + + GF D+ R + Y + + G Sbjct: 584 KPLHHG---YGPVAFPASRYMLENGFKDSFREKNPDEVAY-----QGGTVAAIYGQMQMS 635 Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTK--PSDHTPVIVSLDI 263 RID I + S++I SDH V+ ++ Sbjct: 636 RIDFIYYKGGL--KVLSSKIVRTAPEIDYVWASDHAAVLTVFEV 677 >gi|34392560|dbj|BAC82609.1| pol-like protein [Danio rerio] Length = 1329 Score = 59.0 bits (141), Expect = 8e-07, Method: Composition-based stats. Identities = 36/256 (14%), Positives = 67/256 (26%), Gaps = 27/256 (10%) Query: 1 MSVVTVATWNVNSIRARIHNL--AAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 M + +A+ N+N R IKE D++ +QET ++ N + I Sbjct: 34 MGELNIASLNINGAREGKKRFYLFEMIKEKKIDVLFVQETHSDALNACDWAREYNGLPIL 93 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + GVA+L I + + + + Sbjct: 94 SHLSSVSGGVAVLFSKNFIPCSYQVEEIINGRLLKIRAQFENSVFVFISV----YVPTRA 149 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 I + + +S + + + + Sbjct: 150 IERMCFLETLSNVLANCNTEDVLILGGDFNCTESSLDRNHVE-------------PHMPS 196 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R+ Q + TD R + Y++ Y + S R+D +L Sbjct: 197 QRRLIQLIHFNDITDIWRNFNSYQRQYTWLHTYDNLLSL---ARLDRFYGYRHQLNLFKE 253 Query: 239 ARIDTKPRGWTKPSDH 254 I SDH Sbjct: 254 CVI-----SPVGFSDH 264 >gi|298283547|gb|ADI72893.1| DNA lyase [Ophiocordyceps unilateralis] Length = 227 Score = 58.6 bits (140), Expect = 8e-07, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 34/91 (37%), Gaps = 14/91 (15%) Query: 1 MSVVTVATWNVNSIR----------AR-IHNLAAWIKENNPDIICLQETKTEDKNFPFET 49 ++ + + TWNVN IR AR + ++ DI+ +QE K + K+ + Sbjct: 4 LAKMRLTTWNVNGIRNPFSYQPWNTARSFSAMFDILET---DIVVMQELKIQRKDLKDDM 60 Query: 50 LQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80 + + K G + + Y Sbjct: 61 VLVDGWDCYFSLPKHKKGYSGVGIYTRNATC 91 >gi|242006795|ref|XP_002424230.1| sphingomyelin phosphodiesterase, putative [Pediculus humanus corporis] gi|212507599|gb|EEB11492.1| sphingomyelin phosphodiesterase, putative [Pediculus humanus corporis] Length = 439 Score = 58.6 bits (140), Expect = 8e-07, Method: Composition-based stats. Identities = 32/244 (13%), Positives = 64/244 (26%), Gaps = 31/244 (12%) Query: 4 VTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDK--NFPFETLQSLN 54 + V T N + + RI +A ++ ++ DI+CLQE ++ + L Sbjct: 15 IRVFTLNCWGLPCFSKNKKCRITAIAEYLSSSDLDIVCLQEIWSKKDYLYISKKCFLQLP 74 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL-------- 106 Y +G+ I SK+ ++ H + Sbjct: 75 YSHYFNSFIIGSGLCIFSKHPISDVYFHQWPINGYAHKIHQGDWLAGKGVAFARIKIKDL 134 Query: 107 ---RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 N + ++ +F +E + + AGD N P Sbjct: 135 VVNVYNAHLHAEYNIHGTEYLSHRVLQAFDTSQFIRLTIEDCDLAVLAGDLNTEPDDLAI 194 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223 ++ + + +G RI Sbjct: 195 KILNQNAQLTDCYFVAQKKTLTFFGTNESTRNSYAPKSEV-----------KRLPQGKRI 243 Query: 224 DHIM 227 D+I+ Sbjct: 244 DYIL 247 >gi|53791238|dbj|BAD52447.1| p97Bcnt bucentaur [Tragulus javanicus] Length = 399 Score = 58.6 bits (140), Expect = 8e-07, Method: Composition-based stats. Identities = 38/290 (13%), Positives = 70/290 (24%), Gaps = 37/290 (12%) Query: 6 VATWNVNSIRARIHNLAAWIKEN----NPDIICLQETKTE-DKNFPFETLQSLNYHIETC 60 + TWNV S+ +K+ N DI+ + E K + H Sbjct: 106 IGTWNVRSMN---PGKLDVVKQEMDRINIDILGISELKWTGMGELNSDD------HYIYY 156 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + ++ + + G +L I Sbjct: 157 CGQQSLRRNGVALIVNKRVQNAIIGCNLKNDRMISLRFQGKPFNLTVIQVFAPTPYAEEG 216 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + + L + IP + + ++ Sbjct: 217 EVYRFYEDLQHLLEITPKIDVLFIIGDWNAKVGSQEIPGITGRFGLGMQNEAGRRLIDFC 276 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 N + LY++ + ID+I+ S + SA+ Sbjct: 277 H-----HNRLVIANTLFQQPSRRLYTWTSPDGRFRDQ-----IDYIICRQRWRSSVQSAK 326 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI----------PEPRKKQQDSTSQNMKP 280 G SDH +I + P + D TS+ KP Sbjct: 327 TRP---GADCGSDHKLLIAKFRLKLKIIPKTTRPFRGTNEADDTSEESKP 373 >gi|40363523|dbj|BAD06249.1| p97Bcnt [Tragulus javanicus] Length = 574 Score = 58.6 bits (140), Expect = 8e-07, Method: Composition-based stats. Identities = 38/290 (13%), Positives = 70/290 (24%), Gaps = 37/290 (12%) Query: 6 VATWNVNSIRARIHNLAAWIKEN----NPDIICLQETKTE-DKNFPFETLQSLNYHIETC 60 + TWNV S+ +K+ N DI+ + E K + H Sbjct: 239 IGTWNVRSMN---PGKLDVVKQEMDRINIDILGISELKWTGMGELNSDD------HYIYY 289 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + ++ + + G +L I Sbjct: 290 CGQQSLRRNGVALIVNKRVQNAIIGCNLKNDRMISLRFQGKPFNLTVIQVFAPTPYAEEG 349 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + + L + IP + + ++ Sbjct: 350 EVYRFYEDLQHLLEITPKIDVLFIIGDWNAKVGSQEIPGITGRFGLGMQNEAGRRLIDFC 409 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 N + LY++ + ID+I+ S + SA+ Sbjct: 410 H-----HNRLVIANTLFQQPSRRLYTWTSPDGRFRDQ-----IDYIICRQRWRSSVQSAK 459 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI----------PEPRKKQQDSTSQNMKP 280 G SDH +I + P + D TS+ KP Sbjct: 460 TRP---GADCGSDHKLLIAKFRLKLKIIPKTTRPFRGTNEADDTSEESKP 506 >gi|75052143|sp|Q588U8|CFDP2_TRAJA RecName: Full=Craniofacial development protein 2; AltName: Full=p97 bucentaur protein gi|62241227|dbj|BAD93708.1| p97Bcnt [Tragulus javanicus] Length = 574 Score = 58.6 bits (140), Expect = 8e-07, Method: Composition-based stats. Identities = 38/290 (13%), Positives = 70/290 (24%), Gaps = 37/290 (12%) Query: 6 VATWNVNSIRARIHNLAAWIKEN----NPDIICLQETKTE-DKNFPFETLQSLNYHIETC 60 + TWNV S+ +K+ N DI+ + E K + H Sbjct: 239 IGTWNVRSMN---PGKLDVVKQEMDRINIDILGISELKWTGMGELNSDD------HYIYY 289 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + ++ + + G +L I Sbjct: 290 CGQQSLRRNGVALIVNKRVQNAIIGCNLKNDRMISLRFQGKPFNLTVIQVFAPTPYAEEG 349 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + + L + IP + + ++ Sbjct: 350 EVYRFYEDLQHLLEITPKIDVLFIIGDWNAKVGSQEIPGITGRFGLGMQNEAGRRLIDFC 409 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 N + LY++ + ID+I+ S + SA+ Sbjct: 410 H-----HNRLVIANTLFQQPSRRLYTWTSPDGRFRDQ-----IDYIICRQRWRSSVQSAK 459 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI----------PEPRKKQQDSTSQNMKP 280 G SDH +I + P + D TS+ KP Sbjct: 460 TRP---GADCGSDHKLLIAKFRLKLKIIPKTTRPFRGTNEADDTSEESKP 506 >gi|322797021|gb|EFZ19335.1| hypothetical protein SINV_07629 [Solenopsis invicta] Length = 388 Score = 58.6 bits (140), Expect = 8e-07, Method: Composition-based stats. Identities = 45/257 (17%), Positives = 77/257 (29%), Gaps = 17/257 (6%) Query: 16 ARIHNLAAWIKENNPDIICLQETKTEDK--NFPFETLQSLNYHIETCGQKSYNGVAILSK 73 ARI +A DIICLQE + D + + L Y +G+ ILS+ Sbjct: 19 ARISAIADKCASMEYDIICLQEVWSVDDFKLIKAKAQEVLPYSHYFHSGVFGSGICILSR 78 Query: 74 YQPIEIVTHLPGDDLDVQARFIEATFTINT---QTLRIGNLYLPHGNPITSTKYDDKISW 130 Y +++ H + V F ++I N+ + +Y+ + Sbjct: 79 YPIQDVMFHKWPLNGYVHKIHHGDWFGGKGVGLCKIKILNMNVNVYITHLHAEYNHENDE 138 Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG 190 + + G II P + Sbjct: 139 YMAHRVLQAFDTAQFVKMTSGGADAIILAGDLNTEPQDLAYKIIQGVSGLVDTCPNSASH 198 Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI--MLSPEATSLLHSA---RIDTKP 245 A + Y+ + +K G RIDHI + S + + ++ P Sbjct: 199 IGTNECANN----SYT---SSKLAQTKPDGKRIDHIMYLGSKTVKVEVTNFQHPWLNRVP 251 Query: 246 RGWTKPSDHTPVIVSLD 262 SDH V+ +L Sbjct: 252 YKNFSYSDHEAVMATLK 268 >gi|17545188|ref|NP_518590.1| hypothetical protein RSc0469 [Ralstonia solanacearum GMI1000] gi|17427479|emb|CAD13997.1| putative endonuclease/exonuclease/phosphatase protein [Ralstonia solanacearum GMI1000] Length = 248 Score = 58.6 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 37/276 (13%), Positives = 82/276 (29%), Gaps = 46/276 (16%) Query: 1 MSVVTVATWNVN----SI--RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 M + VAT+N++ I R R+H++ + + DI+ LQE + + L + Sbjct: 1 MLRLRVATYNIHKGVTGIARRVRVHDVRQGLHTMDADIVFLQEVQDRNDRLVAAELFDPH 60 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 Y + Y + D + + ++ L I + Sbjct: 61 Y--------TQLRYLATDVYPHTVYGRNAVYDHGHHGNAILSRYPILLSENLDISDHRFE 112 Query: 115 HGNPITSTKY--DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD---CYNPIIW 169 + + ++ + ++ + + +++P + W Sbjct: 113 QRGLLHAVADLGFGEVHLLCAHFGLFARSRRRQAEALIERVCSVVPIDAPLVVAGDFNDW 172 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 N + ++ + T +H + +R+D I Sbjct: 173 NNRLDRVICQALGVTEVADKAAGARPLRTFPSHLPW---------------LRLDRIY-- 215 Query: 230 PEATSLLHSARIDTKP----RGWTKPSDHTPVIVSL 261 + ID R W + SDH P++ L Sbjct: 216 ------VRGFEIDRAHALTGRDWAQRSDHVPLLAEL 245 >gi|265767745|ref|ZP_06095277.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|263252417|gb|EEZ23945.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] Length = 678 Score = 58.6 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 41/284 (14%), Positives = 73/284 (25%), Gaps = 37/284 (13%) Query: 2 SVVTVATWNVN--SI---RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56 ++V V WN+ I + I+ + D+I +QE SL YH Sbjct: 409 NIVKVLQWNIWHGGIHLGNEGQQRVLDLIRSSRADVIMMQE----AYGIQQMLADSLGYH 464 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 ++T N + LR Sbjct: 465 LKT-HSLKDNLAMYSRFPLEAIAWREPFKSNPAKITLPNGKRIMFVDCWLRYAYRPEYTS 523 Query: 117 NPITSTKYDDKI----------SWIKRFLRFASQRLELEEPLIFAGDYN-IIPQPHDCYN 165 + + + LE + P+I GD+N Sbjct: 524 GYAEKGLDPSVWVAEDSILALPDIRNIYTKDIAPNLETDMPVIVTGDFNSCSHLDWTERA 583 Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG----I 221 + + + + + GF D+ R + Y + + G Sbjct: 584 KPLHHG---YGPVAFPASRYMLENGFKDSFREKNPDEVAY-----QGGTVAAIYGQMQMS 635 Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTK--PSDHTPVIVSLDI 263 RID I + S++I SDH V+ ++ Sbjct: 636 RIDFIYYKGGL--KVLSSKIVRTAPEIDYVWASDHAAVLTVFEV 677 >gi|87198716|ref|YP_495973.1| endonuclease/exonuclease/phosphatase [Novosphingobium aromaticivorans DSM 12444] gi|87134397|gb|ABD25139.1| Endonuclease/exonuclease/phosphatase [Novosphingobium aromaticivorans DSM 12444] Length = 245 Score = 58.6 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 35/271 (12%), Positives = 70/271 (25%), Gaps = 36/271 (13%) Query: 4 VTVATWNVN---SI-RAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 + VA++N++ + R R + ++E + D+I LQE + L + Sbjct: 3 LKVASYNIHKGVGLDRRRDPDRILTVLREIDADVIALQE---------ADRRFGLREAVI 53 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + + + + A + + P G Sbjct: 54 PRAMLDDHSPWRVVEPGHYDRARTSSSMGWHGNALLVRRDIEVIDACAVPLPTLEPRGAV 113 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 S + + + S ++ G H + D Sbjct: 114 CASLRLAGHVVRVLGMHLDLSGLRRRQQIETICGHIE----DHPERGHAVLMGDFNEWSP 169 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 + + A SF + +D I++S + + Sbjct: 170 SGGALSAFADHLRVLAPGR--------SFPSRRPVAQ-------LDRIVVSDGL--HVDA 212 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIPEPRKK 269 A + P SDH PV L +P Sbjct: 213 AGVHHSPLAAVG-SDHLPVWAELRLPGNEAD 242 >gi|253567149|ref|ZP_04844599.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|251943980|gb|EES84499.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] Length = 678 Score = 58.6 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 41/284 (14%), Positives = 74/284 (26%), Gaps = 37/284 (13%) Query: 2 SVVTVATWNVN--SI---RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56 ++V V WN+ I + I+ + D+I +QE SL YH Sbjct: 409 NIVKVLQWNIWHGGIHLGNEGQQRVLDLIRSSRADVIMMQE----AYGIQQMLADSLGYH 464 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 ++T N + LR Sbjct: 465 LKT-HSLKDNLAMYSRFPLEAIAWREPFKSNPAKITLPNGKRIMFVDCWLRYAYRPEYTS 523 Query: 117 NPITSTKYDDKI----------SWIKRFLRFASQRLELEEPLIFAGDYN-IIPQPHDCYN 165 + + + LE + P+I GD+N Sbjct: 524 GYAEKGLDPSVWVAEDSILALPDIRNIYTKDIAPNLETDMPVIVTGDFNSCSHLDWTERA 583 Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG----I 221 + + + + + GF D+ R + +Y + + G Sbjct: 584 KPLHHG---YGPVAFPASRYMLENGFKDSFREKNPDEVVY-----QGGTVAAIYGQMQMS 635 Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTK--PSDHTPVIVSLDI 263 RID I + S++I SDH V+ ++ Sbjct: 636 RIDFIYYKGGL--KVLSSKIVRTAPEIDYVWASDHAAVLTVFEV 677 >gi|327271381|ref|XP_003220466.1| PREDICTED: sphingomyelin phosphodiesterase 2-like [Anolis carolinensis] Length = 409 Score = 58.6 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 38/293 (12%), Positives = 81/293 (27%), Gaps = 37/293 (12%) Query: 4 VTVATWNVNSIR-------ARIHNLAAWIKENNPDIICLQETKTEDK--NFPFETLQSLN 54 + + N IR R+ + + + D++ LQE +E + Sbjct: 9 LRIFDLNCWGIRYISKLQQERVELIGDVLNQEGFDLVLLQEVWSEKDYWELKKKLCTCYP 68 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI------ 108 +GV + SK+Q ++ H + F + L + Sbjct: 69 SSYYFKSGVIGSGVCVFSKHQILDTFQHQYSVNGYPYMFQHGDWFGGKSVGLVVLKIKGI 128 Query: 109 -----GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 + ++ +F + + ++ GD N+ P+ Sbjct: 129 VFNIYVTHLHAEYSREKDYYLSHRVVQAWELAQFIQHTCKGADVVLLGGDLNMHPEDVVV 188 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223 W + + A T+ + +GIRI Sbjct: 189 RLLQGWVGLQDSFITAEKVEGCEDGCTLVPANCFTNKKEL---------QCFP--QGIRI 237 Query: 224 DHIMLSPEATSLLHSARID-----TKPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271 D+I+ + P SDH V+V+L + + + ++ Sbjct: 238 DYILY-KGLSQYEIRCNSHETTTGKAPNKDIPYSDHEAVMVTLSVAKKQSDEE 289 >gi|326798228|ref|YP_004316047.1| endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21] gi|326548992|gb|ADZ77377.1| Endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21] Length = 282 Score = 58.6 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 42/270 (15%), Positives = 83/270 (30%), Gaps = 22/270 (8%) Query: 4 VTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQE-TKTEDKNFPFETLQSL 53 + VAT+NV N R +AA I ++ DI QE K + + + Sbjct: 24 LRVATFNVRYANPGDTGNLWEDRAPVVAALIDFHDFDIFGTQEALKRQLDDISAALPEYQ 83 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 Y + + + + + + L + + RI + Sbjct: 84 RYGLGRDDGQEGGEHSAIYFKKDRFFLLKKGDFWLSETPDKPSFGWDAKSHK-RICSWIQ 142 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + + + ++ + +L I + P I+ D Sbjct: 143 LRDKKSKREFFVFNAHYDHQGIQARKESSKLILNKI---------KEIAQGAPTIFTGDM 193 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 + E Q+ D + + + ++ + + S IDHI ++ + Sbjct: 194 NGSEETEWYQALAQSALLKDTQKLVAKPYKPNASFNGFGNEKSLQATAIIDHIFVTKDF- 252 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + T PSDH PV+V L+I Sbjct: 253 -KALKWGVLTDTYHGKFPSDHFPVMVDLEI 281 >gi|307128824|ref|YP_003880840.1| metal-dependent hydrolase [Dickeya dadantii 3937] gi|306526353|gb|ADM96283.1| Metal-dependent hydrolase [Dickeya dadantii 3937] Length = 287 Score = 58.6 bits (140), Expect = 9e-07, Method: Composition-based stats. Identities = 40/294 (13%), Positives = 80/294 (27%), Gaps = 44/294 (14%) Query: 4 VTVATWNVN-SI----RARIHNLAAWIKENNPDIICLQET-----KTEDKNFPFETLQSL 53 + + ++N+ + R + +A ++ DIIC+QE ++ + P E L Sbjct: 1 MHIVSYNIQYGLGRDGRYDLARIADEVR--GADIICMQEVERFWQRSGMMDQPAELAALL 58 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 + G + +S + G + + + + + + Sbjct: 59 GEYHWVYGANLDMDASTVSADGRVVNRRRQFGTLTLSRRPILSSRNFPLPKFGTLTQHSI 118 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 G T I + + + Sbjct: 119 QQGVLETVIDTGAGAIRIYNTHLSHLCAGTRLPQVEAMLALFARAPDEGGAWCGGHPDPS 178 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF----WDYYADSWSKNKGI-------- 221 E R L+ + D YS + +++G+ Sbjct: 179 AGWTEGRMPLMPLEMILMGDL--NCLPDSEEYSRLVGPVSPHHGRLVRHRGLMDAWVAAG 236 Query: 222 --------------RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 RIDH +L+P + DT+ +G SDH P+ V L Sbjct: 237 QPESSGSTHPSVGGRIDHCLLTPSLGLTVRRCWADTENQG----SDHHPLWVEL 286 >gi|313204713|ref|YP_004043370.1| endonuclease/exonuclease/phosphatase [Paludibacter propionicigenes WB4] gi|312444029|gb|ADQ80385.1| Endonuclease/exonuclease/phosphatase [Paludibacter propionicigenes WB4] Length = 289 Score = 58.6 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 43/281 (15%), Positives = 87/281 (30%), Gaps = 47/281 (16%) Query: 4 VTVATWNVN-------SIRARIHN---LAAWIKENNPDIICLQET--KTEDKNFPFETLQ 51 +T+AT+N+ R+ ++ +A IK+ + DI +QE K ++ + + Sbjct: 27 LTIATYNIRLQTPVDSGARSWVNRKADVARVIKKYDFDIFGVQEVGNKNQEADL-KALIP 85 Query: 52 SLNYHIE--TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI----NTQT 105 Y + + L + L + + Sbjct: 86 DYTYFGKGRDNQVGTDGEQIGLFYKTKRFLAKEKGSFFLSETPEVMSKGWDAAYRRMCVW 145 Query: 106 LRIGNLYLPHGNPITSTKYDDK----ISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161 +R + + + +D R + +++ +P++F GD N P Sbjct: 146 IRFQDAETKSEFFVFCSHFDHMGVKARVESARLIEQQVKKIAAGKPVLFLGDLNTAPDET 205 Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI 221 D Y + D + + + + D + Sbjct: 206 DMYKILHATFDDSREISAKPAIGSVGTFNNYDVSKMMLPVSE------------------ 247 Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTK--PSDHTPVIVS 260 RID+I + S R+ + R K PSDH PV++ Sbjct: 248 RIDYIFCKK---IKVFSYRVISD-RFSEKTYPSDHFPVMIE 284 >gi|68473302|ref|XP_719209.1| potential rRNA 3' end processing RNAse Ngl2p [Candida albicans SC5314] gi|46441016|gb|EAL00316.1| potential rRNA 3' end processing RNAse Ngl2p [Candida albicans SC5314] Length = 519 Score = 58.6 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 23/177 (12%), Positives = 53/177 (29%), Gaps = 23/177 (12%) Query: 1 MSVVTVATWNV-------------NS------IRARIHNLAAWIKENNPDIICLQET-KT 40 + + + ++N+ N +R++I L +K N DI+CLQE K Sbjct: 112 LPSIKIMSYNILAQTLIRREIYPTNGKILKWSVRSQI--LLDELKHYNADIMCLQEVDKV 169 Query: 41 EDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT 100 + + F L+ L Y + N ++ + H LD + + Sbjct: 170 QYEGFWVSQLEKLGYSTRFYRNNTKNHGCVIVFRDKLFTCKHQSFIRLDQDLNQEASEKS 229 Query: 101 INTQTL-RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI 156 + + ++ + ++ + + L + Sbjct: 230 LPPARIATTNIAFMAYLEFTSTFIKEYPCLEETNGFIIGTTHLFWHPFGTYERARQT 286 >gi|290993412|ref|XP_002679327.1| predicted protein [Naegleria gruberi] gi|284092943|gb|EFC46583.1| predicted protein [Naegleria gruberi] Length = 332 Score = 58.6 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 55/315 (17%), Positives = 89/315 (28%), Gaps = 67/315 (21%) Query: 2 SVVTVATWNVNSIRARIHNL-------AAWIKENNPDIICLQETKT-------------- 40 S + + +NVN + A L + + D+ICLQET Sbjct: 22 SYLKILNYNVNFVYATKSKLESNALFVFHALFRSEADVICLQETHAGYESAFKQIKWKDV 81 Query: 41 ----------EDKNFPFET-LQSLNYHIETCGQKSYNGVAILSKYQPI------------ 77 D+ F E L SL H + G+A LSKY+ + Sbjct: 82 RNLDQNLNGNLDEKFKEEQSLISLYPHYVFYNHGAAGGMAFLSKYEFLENSQITLATNAK 141 Query: 78 -----EIVTHLPGDDLDVQARFIEATFTINTQT--LRIGNLYLPHGNPITSTKYDDKISW 130 ++V + + E T Q + + + + S + Sbjct: 142 DQYGKKVVDGSWFPMHLITVKVPEKTTGNVKQVLLVNVHLRPPLNDDGSASLWTARMTNV 201 Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG 190 + +I G+ YN + F L Sbjct: 202 YRLNEIKYLYNYLEGIGIISFGNTTCPIVILGDYNEHDNDPSCEFLKLSNLFQDALNEFV 261 Query: 191 FTDAIRATHDTH---HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRG 247 + LY++W W K R+DH + S + L ID Sbjct: 262 PQNRETHRWPLKFVWGLYTYW------WHK----RLDHCVYSKQFFKCLDCKVIDGYEMN 311 Query: 248 WTKPSDHTPVIVSLD 262 SDH PV+ +L+ Sbjct: 312 ---ASDHQPVLTTLE 323 >gi|189236489|ref|XP_975064.2| PREDICTED: similar to neutral Sphingomyelinase, putative [Tribolium castaneum] gi|270005347|gb|EFA01795.1| hypothetical protein TcasGA2_TC007396 [Tribolium castaneum] Length = 393 Score = 58.6 bits (140), Expect = 1e-06, Method: Composition-based stats. Identities = 45/279 (16%), Positives = 80/279 (28%), Gaps = 30/279 (10%) Query: 5 TVATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKT-EDKNFPFETLQS-LNY 55 V T N + R R+ +A + + D++CLQE D + L Y Sbjct: 4 KVFTLNCWGLAVVSKNRRHRMQAIAEKLATSQYDVVCLQEIWLDSDYQLIRNKVSGVLPY 63 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT---QTLRIGNLY 112 + +GV ILS++ ++ H + + F L++ N Sbjct: 64 SHYFYSGVTGSGVCILSRHPMEDVFFHQWPVNGYIHKIHHGDWFGGKGVGLCKLKVNNYT 123 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 + + +YD + S + ++ P Sbjct: 124 VNVYSAHLHAEYDRNCDEYQAHRVLQSFDTAQFIQMTSGDADLVVLAGDLNTEPGDLAYR 183 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 ++ + + + Y+ A G RID+IM P Sbjct: 184 IMLSVPGLVDAFGEAGETVQNCVATNESLTNSYT---PVALLKKNIPGKRIDYIMYHPG- 239 Query: 233 TSLLHSARIDTKPRGWTKP----------SDHTPVIVSL 261 S +ID K P SDH + +L Sbjct: 240 ----SSLQIDLKSYTLPLPHKIPGCAYSYSDHEAIAATL 274 >gi|308464812|ref|XP_003094670.1| hypothetical protein CRE_25821 [Caenorhabditis remanei] gi|308247067|gb|EFO91019.1| hypothetical protein CRE_25821 [Caenorhabditis remanei] Length = 445 Score = 58.3 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 39/285 (13%), Positives = 76/285 (26%), Gaps = 24/285 (8%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDK--NFPFETLQSLNYHIETCGQKSYNGVAILSKY 74 R+ + ++ E DI+ LQE + + Y + +GV + S++ Sbjct: 68 RLSKIGEYMIEELYDIVGLQELWSYHDFVKLSEQCSSVYPYFHYFHSGFTGSGVCVFSRH 127 Query: 75 QPIEIVTHLPGDDLDVQARFIEATFTINTQTLR------------IGNLYLPHGNPITST 122 + +T + F L + Sbjct: 128 PIVSTLTSRYSLNGFAHHIHRGDWFGGKVVGLTEVEIDGDLRVNFYTTHLHAEYDRENDL 187 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN---PIIWENDACFTLEV 179 + S +F + +I GD N+ P + + EV Sbjct: 188 YLPHRTSQSFELAQFVRHTSRSADVVIVTGDLNMEPCDLGFRMILSHAKLFDAWRMSHEV 247 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD----SWSKNKGIRIDHIML-SPEATS 234 + I + + A S K++ RID+I+ S Sbjct: 248 ENDEADGGELLKYRGIAKGGTCDRPDNCYTKRALKLAVSAKKDESKRIDYILFKSGRCNV 307 Query: 235 LLHSARI-DTKPRGWT-KPSDHTPVIVSLDIPEPRKKQQDSTSQN 277 L I + G SDH + I + + ++ + Sbjct: 308 KLEECEITLNQIPGEQMNYSDHVGLRARFTIDDRFRHERSVNTWE 352 >gi|257468819|ref|ZP_05632913.1| endonuclease/exonuclease/phosphatase [Fusobacterium ulcerans ATCC 49185] gi|317063071|ref|ZP_07927556.1| endonuclease/exonuclease/phosphatase [Fusobacterium ulcerans ATCC 49185] gi|313688747|gb|EFS25582.1| endonuclease/exonuclease/phosphatase [Fusobacterium ulcerans ATCC 49185] Length = 285 Score = 58.3 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 41/276 (14%), Positives = 76/276 (27%), Gaps = 44/276 (15%) Query: 4 VTVATWNV----NSIRARIHNLAAWIKENNPDIICLQET--------KTEDKNFPFETLQ 51 + + T+N+ N+ + + A IK+ NPDI+ +QE K + + Sbjct: 35 MKIMTYNIAAGANNFKVDLKVTAETIKKVNPDIVAIQEVDRNTNRSGKIDQAQILADL-- 92 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 Y++ ++G + L + T Q + + Sbjct: 93 -TGYNMVFGKTIDHDGGDYGIAILSKHPILSQQSLILPSFPN-GDTTSPGYEQRIALITQ 150 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 G + T + + W + Q + E + I+ + N Sbjct: 151 IEVPGFEVPITFINTHLDWHEDPAVRLQQIRTINEITLDMRGIKILAGDFNDTV-----N 205 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 R + A + ID I L+ Sbjct: 206 SVIGKEMERYWVSVFDDKIDHRTWPAVNPEVA-------------------IDQIYLNKA 246 Query: 232 ATSLLHSARIDTKPRG----WTKPSDHTPVIVSLDI 263 + + + W K SDH PVIV L + Sbjct: 247 QVWEAKTYVPNKENEKDGIQWNKVSDHIPVIVDLKL 282 >gi|41409338|ref|NP_962174.1| hypothetical protein MAP3240 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41398158|gb|AAS05788.1| hypothetical protein MAP_3240 [Mycobacterium avium subsp. paratuberculosis K-10] Length = 260 Score = 58.3 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 33/270 (12%), Positives = 77/270 (28%), Gaps = 31/270 (11%) Query: 4 VTVATWNV-------NSIRARIHNLAAWIKENNPDIICLQET-----KTEDKNFPFETLQ 51 + VAT+N+ + + + L I+ +PD++ LQE ++E + + Sbjct: 7 MRVATFNILHGRTVCDGVN--VERLRDCIRRLDPDVLSLQEVDCDQPRSEHADLTGAAAE 64 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 ++ + ++ + + + Q LR+ + Sbjct: 65 AMG----AVEHRFVAAISGTPGATWMAATGDEQPGTAAYGIALLSRYPVASWQVLRLPRI 120 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 + + + R A R + E + + +P + + + Sbjct: 121 PMRFPMYLPGPNRVMIVDEEPRAAVIAQLRTPIGELTVANTHLSFVPGWNRRQLRRLIRD 180 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 + + +F + N ++DHI+ Sbjct: 181 LRGLPGPRLLTGDLNMTPQTVRRWSGMRALGNAKTFP-------ADNPNRQLDHILTDDR 233 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 L A + SDH P++V L Sbjct: 234 ---RLRCAAVQADLM---PISDHRPLVVDL 257 >gi|84500561|ref|ZP_00998810.1| hypothetical protein OB2597_11401 [Oceanicola batsensis HTCC2597] gi|84391514|gb|EAQ03846.1| hypothetical protein OB2597_11401 [Oceanicola batsensis HTCC2597] Length = 266 Score = 58.3 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 35/277 (12%), Positives = 65/277 (23%), Gaps = 33/277 (11%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNF-PFETLQSLNYHIETCGQ 62 + + + N R + AWI E PDI+CLQET F P L+Y Sbjct: 1 MRIVSLNAWGGRL-FEEMVAWIAEVQPDILCLQET-----VFAPGSPSAWLDYRDGDTVL 54 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 V + ++ + + G Sbjct: 55 PQRADVLRDVSRALPDHGMSFCPAACGNLWLGNREVPSLWGLATFLHPDLMIVGQSQGFV 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 R + + G + + + + Sbjct: 115 HGAFSPDGFGDHPRSRTAHVVRVWHPDE-GGITVGHMHGLRDPNGKMDTPVRGEQARKFA 173 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW--SKNK-------GIRI---------- 223 + D + A D + L + + N G R Sbjct: 174 TMVQSVLQPGDPVVACGDFNVLPGSETFRVMARVAPYNLVTQRGFDGTRTSHYEKPERWA 233 Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 D+++++ R SDH P+++ Sbjct: 234 DYMLVNGPLKDAAFDV-----IRTPEI-SDHCPLVLD 264 >gi|302784148|ref|XP_002973846.1| hypothetical protein SELMODRAFT_414230 [Selaginella moellendorffii] gi|300158178|gb|EFJ24801.1| hypothetical protein SELMODRAFT_414230 [Selaginella moellendorffii] Length = 471 Score = 58.3 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 27/249 (10%), Positives = 59/249 (23%), Gaps = 31/249 (12%) Query: 21 LAAWIKENNPDIICLQETKTEDKN-----FPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75 + ++++ D+I LQE + E++ ++Y + + Sbjct: 243 VFEVLRDSKADLIALQEVRAEEEKGMSPLTDLAEALGMHYAYAESWAPEFGNAILSRNLL 302 Query: 76 PIEIV---THLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIK 132 + + E + +PH + + Sbjct: 303 KVVVDVPSFGEVCYCCTHLDHLDEDWRIKQVSAILEDTKKVPHFLAGDLNSLNRPDYSQE 362 Query: 133 RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192 R+ A + + A + + P+ ++ + L Sbjct: 363 RWAEIAKASSFFQACQLRAENRKMAPRSDVMERLLVEKGYMDSCAVASPEIPALVRGQEI 422 Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPS 252 + RID+I+ SP K S Sbjct: 423 QGTCKHNT---------------------RIDYILASPHLQYRFIPGS--YKVVSSRGTS 459 Query: 253 DHTPVIVSL 261 DH V V + Sbjct: 460 DHHLVTVDI 468 >gi|319944727|ref|ZP_08018991.1| endonuclease/exonuclease/phosphatase [Lautropia mirabilis ATCC 51599] gi|319741976|gb|EFV94399.1| endonuclease/exonuclease/phosphatase [Lautropia mirabilis ATCC 51599] Length = 253 Score = 58.3 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 32/274 (11%), Positives = 69/274 (25%), Gaps = 43/274 (15%) Query: 4 VTVATWNVN-------SIRAR--IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ--- 51 + VAT+N++ S+R R + + + E D++ LQE + ++ F Q Sbjct: 6 LRVATYNIHKGVVPGPSLRRRPMVKEMRQRLHELQADVVFLQEVQGQNNRFAKRFAQWPA 65 Query: 52 --SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 Y + + F+ + R Sbjct: 66 DPQAQYLALDPESSRRFQAVYGLNARYLHGHHGNALLSQFPILSIENRDFSDHVFERRGV 125 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 + + R + L + P Sbjct: 126 LHCVLQMGERAVHCFVIHFGLFARSRARQAGALIDWI------RAEVPPGAPLLIAGDFN 179 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 + + + + + + A +R+D I + Sbjct: 180 DWQDALSRLLVERLGVYEVLDSARTFPALMPC-------------------LRMDRIYV- 219 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + +A++ W + SDH PV+ L + Sbjct: 220 RGFA--VETAQVLRG-LSWARLSDHAPVVADLTL 250 >gi|197105800|ref|YP_002131177.1| hypothetical protein PHZ_c2338 [Phenylobacterium zucineum HLK1] gi|196479220|gb|ACG78748.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1] Length = 243 Score = 58.3 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 47/274 (17%), Positives = 84/274 (30%), Gaps = 49/274 (17%) Query: 5 TVATWNV-----NSIRARIHNLAAWIKENNPDIICLQET-----KTEDKNFPFETLQSL- 53 + T+NV N R + +AA + NPDI+ LQE +T + E + L Sbjct: 3 RIVTYNVHRCVGNDRRLDVSRIAAVLAALNPDIVALQELDVGRRRTNYADQAHEIAEQLE 62 Query: 54 ---NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 ++H ++ G AIL+ Y + ++A + + IG Sbjct: 63 MACHFHAALQVEEERYGDAILTAYPERLVKVGPLPGYDRMRALEPRGALWVE---VEIGG 119 Query: 111 LYLPHGN-PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 + N + + +I + P I GD+N Sbjct: 120 KPVQIINTHLGLIPREQQIQAAHLAGTTWLDHPDCRWPAILLGDFNATATSVVYRTLTAR 179 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 + + + T + +RIDH+ +S Sbjct: 180 LK---------AARRLTRRRTATSTFPSPLPV-------------------LRIDHVFVS 211 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 P +H P SDH P+++ D+ Sbjct: 212 PGIE--VHDVFAPFDPLTRV-ASDHLPLVMDFDV 242 >gi|313159826|gb|EFR59182.1| endonuclease/exonuclease/phosphatase family protein [Alistipes sp. HGB5] Length = 326 Score = 58.3 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 48/299 (16%), Positives = 85/299 (28%), Gaps = 44/299 (14%) Query: 4 VTVATWNV-NSIRA----RIHNLAAWIKENNPDI--ICLQE------------TKTEDKN 44 + + WN+ N + + W+ NPD+ C E K E+ Sbjct: 32 LRLLYWNIQNGMWSGQGDNYTRFVNWVSAQNPDVCVWC--ESVTNYKTASDEKIKPEEAY 89 Query: 45 FPF---ETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLD----VQARFIEA 97 P E + + G N +++ PIE V L G D A + + Sbjct: 90 LPEHWGELARRYGHEYWYKGGHRDNFPQVITSKYPIENVARLIGAVPDSIVSHGAGWAQI 149 Query: 98 TFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII 157 +T + + + + K + K S R + G Sbjct: 150 RKNGHTVNIVSLHTWPQVYGFGLADKLERKASAAAREGDRFRRMEIEYVCNHTIGSVAGA 209 Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK 217 + E + D I + + Y + Sbjct: 210 EKQLWMMMGDFNSKSRVDNYE-YGFPEDTTAFLVHDYICQHTPYVDVIA--AKYPGEFQT 266 Query: 218 NKGIR--IDHIMLSPEATSLLHSARIDTKP-----------RGWTKPSDHTPVIVSLDI 263 G R ID++ + + SAR+ + R + PSDH P+I+ D+ Sbjct: 267 TTGRRFRIDYVYCTRPLYDRIVSARVVSDEYTTPVRDPQELRNFWHPSDHRPIIIDFDM 325 >gi|315607053|ref|ZP_07882057.1| AP endonuclease domain protein [Prevotella buccae ATCC 33574] gi|315251107|gb|EFU31092.1| AP endonuclease domain protein [Prevotella buccae ATCC 33574] Length = 365 Score = 58.3 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 42/277 (15%), Positives = 80/277 (28%), Gaps = 41/277 (14%) Query: 2 SVVTVATWNVNSIRARIHN--------LAAWIKENNPDIICLQE-----TKTEDKNFPFE 48 S + V ++NV + + + +++ + DIICLQE K E Sbjct: 99 STLKVLSFNVQNFGYSVDGSPGDGPNPIVSYLARSKADIICLQEANGQVIKAE---LDSV 155 Query: 49 TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108 + ++H E S + + + S++ + ++ ++ + + Sbjct: 156 MGRLYSHHSEELKDSSGDMLRLYSRFPIKRVERIHYQSYGNLSVAYVLDVNGEDVLVVN- 214 Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168 +L NP + + + + L + L A Sbjct: 215 NHLESNLLNPTDKAGFKNLVKGELGRHEARQESTHLIDKLAAASRKRAPQVDSVAAYVAR 274 Query: 169 WENDAC------FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI- 221 F TD + + W Y+ G+ Sbjct: 275 HIGRMPVILCGDFNESPISYAHYRMENLLTDCYVSAGNGPG----WSYHR------SGMY 324 Query: 222 -RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257 RID+I S R+D K K SDH P+ Sbjct: 325 VRIDNIFCSDNWKPY--QCRVDDKI----KESDHYPI 355 >gi|295088164|emb|CBK69687.1| Metal-dependent hydrolase [Bacteroides xylanisolvens XB1A] Length = 316 Score = 58.3 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 46/302 (15%), Positives = 88/302 (29%), Gaps = 45/302 (14%) Query: 2 SVVTVATWNV-----------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETL 50 + +TVA++N+ N R +A ++ ++ DI QE E L Sbjct: 26 TSITVASYNLRNANGGDSINGNGWGQRYPVIAQIVQYHDFDIFGTQECFIHQLKDMKEAL 85 Query: 51 QSLNY-HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 S +Y + K + + V L + + Sbjct: 86 PSYDYIGVGRDDGKEKGEHSAIFYRTDKFDVIEKGDFWLSETPDVPSKGWDAVLPRICSW 145 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 + ++ + I + R S L ++ + Sbjct: 146 GHFKCKDTGFEFLFFNLHMDHIGKKARVESAFLVQDKMKELGKGKELP----AILTGDFN 201 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 + + + S L + R + +F D+ +S+++ RIDH+ +S Sbjct: 202 VDQTHQSYDAFVSKGVLCDSYEKAGFRYAING----TFNDFDPNSFTE---SRIDHVFVS 254 Query: 230 PEA--------------------TSLLHSA--RIDTKPRGWTKPSDHTPVIVSLDIPEPR 267 P + ID K PSDH PV V L+ + + Sbjct: 255 PSFHVKKYGVLTDTYRSIVGKGEKKQANDCPEEIDIKTYQARTPSDHFPVKVELEFEQRQ 314 Query: 268 KK 269 +K Sbjct: 315 QK 316 >gi|78046289|ref|YP_362464.1| putative secreted protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78034719|emb|CAJ22364.1| putative secreted protein [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 287 Score = 58.3 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 36/271 (13%), Positives = 72/271 (26%), Gaps = 28/271 (10%) Query: 4 VTVATWNV------NS---IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 + V ++NV + + R + A IK+ +PD+ QE +E F E L Sbjct: 34 LRVMSFNVRVPADTDGDKRWQVRRAAMVALIKQTHPDVFGTQELVSEQAAFLAEQLPDYR 93 Query: 55 YHIETCGQKSYNGVA-ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 + + + + + +++V D R T+ + L+ Sbjct: 94 WFGQGRRGDDSDEHMGVFYDARVLQVVESGNFWLSDTPERAGSITWGNVLPRMATWALFE 153 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + ++ + + + +P + +D Sbjct: 154 RRSDKSRFYLFNTHFPYRDEDEPARERSAR-----LILSRIAQLPATVPVVLTGDFNSDP 208 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 + +T ++ RID I+ Sbjct: 209 DKITYPTLTAVLRDARAQASKRSGPENTFQDFTTHPTR----------RIDWILY-RGLR 257 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 G PSDH PV+ D P Sbjct: 258 P--TRFATLDDRPGGILPSDHYPVMAEFDWP 286 >gi|168698628|ref|ZP_02730905.1| hypothetical protein GobsU_03844 [Gemmata obscuriglobus UQM 2246] Length = 290 Score = 58.3 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 44/269 (16%), Positives = 81/269 (30%), Gaps = 18/269 (6%) Query: 4 VTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 V V ++N+ N R LA +K PD++ QET ++F + L Sbjct: 27 VRVMSFNIRYGTAKDGENHWDKRKEFLADTVKAFGPDLLGTQETLIFQRDFLSQKLTGYE 86 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 G ++ G + + + + ++ R+ Sbjct: 87 GLGVGREDGKEKGETTALYWRKARFEKTDGGHFWLSETPNVAGSKSWDSSLPRMATWVKL 146 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 + K ++ + ++ + G + Sbjct: 147 KDLAKPNAKPVLFVNTHFDHIGKKARIEGAKLIRDRIGALGAGCS--VVVTGDFNSGEDS 204 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLY--SFWDYYADSWSKNKGIRIDHIMLSPEA 232 + + D+ RA H +F ++ A KG RID I +S + Sbjct: 205 EPYRTLFAARDKNESPVMDSFRAAHPKREPNEGTFTNFKAGPV---KGDRIDWIGVSRDW 261 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 T + A ID + PSDH PV +L Sbjct: 262 T--VTGAGIDRTEKDGRTPSDHFPVTATL 288 >gi|288926930|ref|ZP_06420828.1| AP endonuclease domain protein [Prevotella buccae D17] gi|288336289|gb|EFC74672.1| AP endonuclease domain protein [Prevotella buccae D17] Length = 365 Score = 58.3 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 44/279 (15%), Positives = 81/279 (29%), Gaps = 45/279 (16%) Query: 2 SVVTVATWNV-N-SIRARIHN--------LAAWIKENNPDIICLQE-----TKTEDKNFP 46 S + V ++NV N A + +++ + DIICLQE K E Sbjct: 99 STLKVLSFNVQNFGYSA--DGSPGDGPNPIVSYLARSKADIICLQEANGQVIKAE---LD 153 Query: 47 FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 + ++H E S + + + S++ + ++ ++ + + Sbjct: 154 SVMGRLYSHHSEELKDSSGDMLRLYSRFPIKRVERIHYQSYGNLSVAYVLDVNGEDVLVV 213 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 +L NP + + + + L + L A Sbjct: 214 N-NHLESNLLNPTDKAGFKNLVKGELGRHEARQESTHLIDKLAAASRKRAPQVDSVAAYV 272 Query: 167 IIWENDAC------FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG 220 F TD + + W Y+ G Sbjct: 273 ARHIGRMPVILCGDFNESPISYAHYRMENLLTDCYVSAGNGPG----WSYHR------SG 322 Query: 221 I--RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257 + RID+I S + R+D K K SDH P+ Sbjct: 323 MYVRIDNIFCSDDWKPY--QCRVDDKI----KESDHYPI 355 >gi|311032107|ref|ZP_07710197.1| endonuclease/exonuclease/phosphatase [Bacillus sp. m3-13] Length = 264 Score = 58.3 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 43/284 (15%), Positives = 77/284 (27%), Gaps = 44/284 (15%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQE---------TKTEDKN----- 44 + + T N +S + +I ++A IKE D+I LQE K K Sbjct: 1 MKLLTLNCHSWQEENQMEKIQHIARAIKEQAYDVIALQEVSQSIDAQVVKGNIKQNNFGL 60 Query: 45 FPFETLQSLN---YHIETCGQKSYNGVA--ILSKYQPIEIVTHLPGDDLDVQARFIEATF 99 + L+ L Y + L+ I T Sbjct: 61 VLQQELEKLGVSDYELVWDFAHMGYDTFEEGLAILTRHSIKKTHSFFVSKSTDSDFWKTR 120 Query: 100 TINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159 I T+ + + D++ + + + E + N Sbjct: 121 KIVGVTVEVQGEEMSFYTCHLGWWSDEEEPAKYQMKQLIEKVKGTEPYFLLGDFNNSAHI 180 Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK 219 + Y + L + WD + Sbjct: 181 KGEGYEFLTST--------AGLHDTYLLASEKDSGVTVEGKIAG----WD------ENKQ 222 Query: 220 GIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +RID I+ S + S+++ + SDH V V+L+I Sbjct: 223 DLRIDLILASSP--PSVTSSKVVFNGQNREVVSDHYGVEVTLEI 264 >gi|213403402|ref|XP_002172473.1| inositol phosphosphingolipids phospholipase C [Schizosaccharomyces japonicus yFS275] gi|212000520|gb|EEB06180.1| inositol phosphosphingolipids phospholipase C [Schizosaccharomyces japonicus yFS275] Length = 427 Score = 58.3 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 43/308 (13%), Positives = 95/308 (30%), Gaps = 39/308 (12%) Query: 4 VTVATWNVNSIR-------ARIHNLAAWIKENNPDIICLQETK----------TEDKNFP 46 + V ++N +R R+H + + E + DI+ LQE + +N P Sbjct: 9 IKVLSFNCWGLRFVSKYRTERLHAIGVKLSECDYDIVLLQEVWSINDYHSIQNSTRENLP 68 Query: 47 FETL---QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 + ++ + + + GD + + + Sbjct: 69 YSRFYHSAAMGAGLAVLSRYPIVETTMNKYPLNGRPQAFWRGDWYVGKGVATASLQHPSG 128 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF-ASQRLELEEPLIFAGDYNIIPQPHD 162 + + + + +L Y ++ ++ ++ AGD+N P Sbjct: 129 KIISVFDTHLHAPYGKGEDTYLCHRMAQAWYISKLIRAAVQRGHIVLAAGDFNFQPLTEP 188 Query: 163 CYNPIIW------ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS 216 + + + I HL ++ A+ Sbjct: 189 HNIITSYGLVSDSWLSVHPDQYKNAPSRFTLSDQELIDILGVTCDSHLNTW---RANVSD 245 Query: 217 KN----KGIRIDHIMLSPEATSLLHSARIDTK--PRGWTKPSDHTPVIVSLDIPEPRKKQ 270 K+ R+D++ SP T + S + T+ P+ SDH + V L++ +KK Sbjct: 246 KDMDDYVAKRLDYVFHSPNNTDAVSSKVVFTEHVPKLDCSYSDHFAIEVVLEL---KKKP 302 Query: 271 QDSTSQNM 278 + T + Sbjct: 303 TEVTKTRL 310 >gi|303288135|ref|XP_003063356.1| predicted protein [Micromonas pusilla CCMP1545] gi|226455188|gb|EEH52492.1| predicted protein [Micromonas pusilla CCMP1545] Length = 573 Score = 58.3 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 27/69 (39%), Gaps = 4/69 (5%) Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253 R T ++ W + + N G RID + + +H I + G SD Sbjct: 297 DARRYPKTSDAFTCWHVASGAQLTNYGARIDAFYVDEATHARVHRVGIAREHPG----SD 352 Query: 254 HTPVIVSLD 262 H PV ++ D Sbjct: 353 HAPVFLAFD 361 >gi|325981641|ref|YP_004294043.1| endonuclease/exonuclease/phosphatase [Nitrosomonas sp. AL212] gi|325531160|gb|ADZ25881.1| Endonuclease/exonuclease/phosphatase [Nitrosomonas sp. AL212] Length = 283 Score = 58.3 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 33/287 (11%), Positives = 71/287 (24%), Gaps = 34/287 (11%) Query: 4 VTVATWNV------NSIRARIHNLAAWIKEN-NPDIICLQETKTE---------DKNFPF 47 + + +WN+ + R + + I++ D+ICLQE + Sbjct: 1 MKLLSWNIQWGRGMDG-RVDLARIIRTIRQIGEFDVICLQEVAVNFPGLPGSRGENQVDE 59 Query: 48 ETLQSLNYHIETCGQKS-YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 + Q Y + + S++ G + T + Q + Sbjct: 60 LSAQLPGYTAIYGAATDVPDSLGGRSQFGNAIFTRLPVGQIWRHLLPWQAELTTPSMQRV 119 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 + + + + + + Sbjct: 120 LVEAVVTTTEFGLLRVMTTHLEYYSHPQRQVQIDAIRHLHHEAHTLSQRKFLTEERGGTF 179 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK--------- 217 ++ L +F DT + + W + Sbjct: 180 EVFPRPGEAILCGDLNFPATAPEHAQILAPFNDDTPNFHDTWSVLNPGITHAPTVGIHPV 239 Query: 218 ---NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 ++ D ++++ L ID + T SDH PV V L Sbjct: 240 DFVDRAECYDFVLITDGLVKHLKIHGIDAE----TAASDHQPVWVEL 282 >gi|149911488|ref|ZP_01900104.1| putative phospholipase C precursor [Moritella sp. PE36] gi|149805452|gb|EDM65460.1| putative phospholipase C precursor [Moritella sp. PE36] Length = 429 Score = 58.3 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 36/280 (12%), Positives = 72/280 (25%), Gaps = 37/280 (13%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKEN-----NPDIICLQETKTE-DKNFPFETLQSLNYH 56 + V ++NV ++ ++ +E D++ LQE F + + Y Sbjct: 165 TLKVMSYNVWALPVIAKHIGDRFQEIPKHLKGYDVLMLQEVFASGRDAFLRDLAKEYPYQ 224 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 + N + + + I Sbjct: 225 TKMLDYPGINVYDGGVTIVSRYPIVNEGQYVYPDCSGTDCFADKGVNYAEVIK------- 277 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 N + + ++ + + FA NI Y N Sbjct: 278 NGKAYHVFATHTASFDTDTARDYRQRQFRQMRDFAQAQNIPVTDTVVYGGDFNVNK---- 333 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYS--FWDYYADSWSKNK---GIRI---DHIML 228 + A + Y+ +D ++++ N G I D++++ Sbjct: 334 -----LKFPTDYQQMFANLSADEPQYAGYTESTFDPRINAYAGNALSGGENIEYLDYVVV 388 Query: 229 SPEATSLLHSARIDTKPRG-----WTKP--SDHTPVIVSL 261 S E + PR W SDH PV + Sbjct: 389 SNEFAKRNENINTVKIPRTTVASLWKHWNLSDHFPVKAVI 428 >gi|255727112|ref|XP_002548482.1| hypothetical protein CTRG_02779 [Candida tropicalis MYA-3404] gi|240134406|gb|EER33961.1| hypothetical protein CTRG_02779 [Candida tropicalis MYA-3404] Length = 499 Score = 58.3 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 24/177 (13%), Positives = 55/177 (31%), Gaps = 23/177 (12%) Query: 1 MSVVTVATWNV-------------NS------IRARIHNLAAWIKENNPDIICLQET-KT 40 + + + ++NV N +R++I L +K N DI+CLQE K Sbjct: 90 LPTIKIMSYNVLAQTLIRREIYPTNGKILKWSVRSQI--LLDELKHYNADILCLQEVDKV 147 Query: 41 EDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT 100 + +F + L Y + + N ++ Q + + LD + Sbjct: 148 QYTSFWSSQFEKLGYGSKFYRYNTKNHGCVIVFRQSLFDCKNQSFIKLDQDLNQTDDEKK 207 Query: 101 INTQTLRIGNL-YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI 156 + + N+ ++ + + + + L + + Sbjct: 208 LPDARIATNNIGFMVYLEFQPKFVKQYPVLENANGIIIGTTHLFWHPFGTYERTRQM 264 >gi|147860973|emb|CAN82939.1| hypothetical protein VITISV_013126 [Vitis vinifera] Length = 2416 Score = 58.3 bits (139), Expect = 1e-06, Method: Composition-based stats. Identities = 29/259 (11%), Positives = 66/259 (25%), Gaps = 32/259 (12%) Query: 4 VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + +WNV ++ + A I+ D+ CLQETK ++SL Sbjct: 690 LRILSWNVRGANDSSKRRXIKAVIRSQRVDLFCLQETKIX--XLSEGLVRSLG------- 740 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 + + +E + + N+ T Sbjct: 741 ---SGRWXNWVALDAVGSAGGMLVCWDKRSLEVMETEVGKFSVSCXFRNVENGLAWIFTG 797 Query: 122 TKYDDKISWIKRFLRFASQRLE-LEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + E+P GD+N+I + Sbjct: 798 VYGPFSKGDRECLWEELGAIRGLWEDPWCLGGDFNVILSQRERNRQGRLTG--------- 848 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + + + +++ + + R+D +++ + Sbjct: 849 -AMRXFAQTVDELELMDLPMQGGAFTW----SGGRNNQSWARLDRFLVTQXWLEMFSGIA 903 Query: 241 IDTKPRGWTKPSDHTPVIV 259 R DH P+++ Sbjct: 904 QCRLQRPTX---DHFPILL 919 >gi|315023440|gb|EFT36448.1| AP endonuclease domain protein [Riemerella anatipestifer RA-YM] Length = 325 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 44/264 (16%), Positives = 75/264 (28%), Gaps = 35/264 (13%) Query: 2 SVVTVATWNVNSIRARIHNLAAW---IKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 S V ++N I+A +A ++ +PDII +QE +F E ++S+ Y E Sbjct: 93 SDFKVVSFN---IKAAEAGIANIDHHLESFSPDIILIQE----KGDF-KEEIESMPYRKE 144 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + Y+ I+ I + +R N+YL Sbjct: 145 IDILEFYSKT---------PIIESGRILIDADNGYASYIDTEIKGKRIRFINVYLKPFEL 195 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + + L I + + F Sbjct: 196 NKDMVKPSTNLTVSEEKAKSLIARFLPVFKAHQTQVEQIRLAVEKSPYPVILG-GDFNAV 254 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 + TD+ +F DY IRID++ + E Sbjct: 255 PNSYEYYYLSQNMTDSFLEVGKGLGT-TFHDYKFP-------IRIDYLFSTKEIKP---- 302 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 +DT + SDH P+I Sbjct: 303 VSLDTD--RSRQLSDHCPIIGEFK 324 >gi|332043935|gb|EGI80130.1| Endonuclease/exonuclease/phosphatase [Lacinutrix algicola 5H-3-7-4] Length = 238 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 31/259 (11%), Positives = 67/259 (25%), Gaps = 24/259 (9%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + TWN N A I N ++ +QE + + + Sbjct: 1 MRIITWNCNG--AFRKKFKE-ISSLNAEVYVIQEC---EDPLKSNHKEYKLWADNYLWIG 54 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 + +P + L + R + L+ N T Sbjct: 55 DNKNKGVGVFAKPNIDLKKLDWSENYNDHRVKYFLPCKINNNFDLLALWNHSNNSPTFGY 114 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 +++ + + L + + W+ + + + Sbjct: 115 IGQFWKYLQINKSNLKKCIILGDF-------------NSNKIWDKWDRWWNHSDVLEELS 161 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + + +F+ + + ID+I S E L+ + Sbjct: 162 ELGIESLYHMYFNEEQGKESKPTFFLQRKLTKPYH----IDYIFGSTEFIKTLNKIEVGN 217 Query: 244 KPRGWTKPSDHTPVIVSLD 262 W K SDH P+I + Sbjct: 218 SS-HWLKLSDHNPIITDFE 235 >gi|319954283|ref|YP_004165550.1| endonuclease/exonuclease/phosphatase [Cellulophaga algicola DSM 14237] gi|319422943|gb|ADV50052.1| Endonuclease/exonuclease/phosphatase [Cellulophaga algicola DSM 14237] Length = 339 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 43/270 (15%), Positives = 80/270 (29%), Gaps = 42/270 (15%) Query: 4 VTVATWNVNSIR--------ARIHNLAAWIKENNPDIICLQE--TKTEDKNFPFETLQSL 53 ++V T+NV S A I +PDIIC QE K + ++ Sbjct: 100 LSVMTFNVRSFNKNMNIKNTAVFEETLELITTEDPDIICFQEFYYKKQKD------FKNY 153 Query: 54 NY-HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 Y ++E + SKY I+ + + + T+R+ NL+ Sbjct: 154 KYMYLEYIKNPGKVKLGFYSKYP---IINKGLINFPESPNNAAFVDIVVKNDTVRVYNLH 210 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 L I D I + + + + + Y II + Sbjct: 211 LESLRVIP----DKDIIAQEESKKLYRRLTNSFKKQQQQAQIIKEHKDKSPYRAIICGDF 266 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 + + + + + ++ +RID I++ Sbjct: 267 NGTQYSNVYKTIRGDMQDTFQEKGSGYGRTYNFRYYP-----------VRIDFILVEDSF 315 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + + K SDH PV+ S + Sbjct: 316 -------NVLSHKNYNVKLSDHFPVMTSFN 338 >gi|149059565|gb|EDM10503.1| rCG65928 [Rattus norvegicus] Length = 267 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 43/224 (19%), Positives = 71/224 (31%), Gaps = 27/224 (12%) Query: 6 VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + N+N + + I L WI+ +P CLQET DK+ + ++ + GQK Sbjct: 12 LISLNINGLNSPIKRHRLTNWIRNEDPAFCCLQETHLRDKDRHYLRVKGWKTTFQANGQK 71 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 GVAIL + + + I I + Sbjct: 72 KQAGVAILISNKINF--------------QLKVIKKDKEGHFIFIKGKIHQDELSILNIY 117 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + + + + I GD+N D +D EV Sbjct: 118 APNTRAPTYVKETLLKLKTHIAPHTIIVGDFNTPLSSMDRSWKQKLNSDVDRLREVMSQM 177 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227 TD R + Y+F+ ++SK IDHI+ Sbjct: 178 ------DLTDIYRTFYPKAKGYTFFSASHGTFSK-----IDHII 210 >gi|330469006|ref|YP_004406749.1| endonuclease/exonuclease/phosphatase [Verrucosispora maris AB-18-032] gi|328811977|gb|AEB46149.1| endonuclease/exonuclease/phosphatase [Verrucosispora maris AB-18-032] Length = 321 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 44/318 (13%), Positives = 78/318 (24%), Gaps = 48/318 (15%) Query: 4 VTVATWNV-------NSIR--ARIHNLAAWIKENNPDIICLQETK---TEDKNFPFETLQ 51 + T+N+ +++R R + I+ PD++ +QE K E Sbjct: 1 MRFVTYNLLDLTLTADNLREANRQQRVIDTIRSLEPDVVAVQELKSPPASAARLAAELAD 60 Query: 52 SLNY-------------HIETCGQKSYNGVAILSK---------YQPIEIVTHLPGDDLD 89 H G + + + V + G Sbjct: 61 RTGLTSTVATNGSARAIHAVAVGDHTVHTALLWRPGLTPLPHTFRTYSPAVHYDGGWRGI 120 Query: 90 VQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLI 149 + F I+ Q + + + P + + + + Sbjct: 121 GYGSMVRLAFQIDGQPITFASYHAPAYGRHRRIDQAEAVLAALTRPHELALIGSDFNSIG 180 Query: 150 FAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN----MGFTDAIRATHDTHHLY 205 A P W + E Q+ + +A Sbjct: 181 AARTNGADYDPDPYTGRPWWPDLVHQCHEPTHPSQRHRADRRPAQVWEAGGLHDVAAATR 240 Query: 206 SFWDYYADSWS------KNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 S W W + R+D I + + S + P SDH PV V Sbjct: 241 SPWKATTGHWPTCPYGVRGIARRVDTIHATQPVLRAVRSLTVVDNPTTRA-ASDHLPVTV 299 Query: 260 SLDIPEPRKKQQDSTSQN 277 LD PRK + Sbjct: 300 DLD---PRKLAVNPGDSR 314 >gi|188584031|ref|YP_001927476.1| endonuclease/exonuclease/phosphatase [Methylobacterium populi BJ001] gi|179347529|gb|ACB82941.1| Endonuclease/exonuclease/phosphatase [Methylobacterium populi BJ001] Length = 283 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 37/278 (13%), Positives = 66/278 (23%), Gaps = 42/278 (15%) Query: 4 VTVATWNV------NSIRARIHNLAAWIKENNPDIICLQET---KTEDKNFPFET----L 50 + + T+NV + R +A I PDI+ LQE + L Sbjct: 33 LRLLTYNVRHCRGTDG-RVAPERVARVIAALEPDIVALQEVDVGRARTGGLDQAEAIARL 91 Query: 51 QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 ++ H + V+ +E + + Sbjct: 92 VGMSSHFHPALHVEEERYGDALLTHLPSRLRRADALPGLVRRPGLEPRGALWAEITVGTA 151 Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170 + EP++ GD+N Sbjct: 152 RLQVLTTHFGLLGAERIAQAEALLGPDWLGDPACREPVVLLGDFNATGWSRAYRRLGRRL 211 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230 DA R+ + + + +RIDH+ +S Sbjct: 212 TDARRLTGERRWRRGTASFPSRLPL-------------------------LRIDHVFVSE 246 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268 + + P SDH PV+ + I R Sbjct: 247 GV--RVDRIAVVDTPLARL-ASDHLPVLAEIRIGPARD 281 >gi|116619520|ref|YP_821676.1| endonuclease/exonuclease/phosphatase [Candidatus Solibacter usitatus Ellin6076] gi|116222682|gb|ABJ81391.1| Endonuclease/exonuclease/phosphatase [Candidatus Solibacter usitatus Ellin6076] Length = 234 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 38/266 (14%), Positives = 67/266 (25%), Gaps = 48/266 (18%) Query: 4 VTVATWNV------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57 + VAT+NV + R H + + E D+I LQE L +H Sbjct: 11 LRVATYNVHKCRGMDG-RVSPHRIGRVLNELKADVIGLQEV--------------LGHHA 55 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 E + G A+ + T+ + Sbjct: 56 EIIAAEMKMGFALGENRRHQGAAYGNVVLSRFPIRSTRNYDLTVEGR------------- 102 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + + S L + + Q + + A + Sbjct: 103 -------EQRGCLRADIDVHGSGVLHIFNVHLGTAWPERRHQGRRLVAAELLGDIALDSP 155 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 V G + +H + + Y + +DHI P LH Sbjct: 156 RVLIGDFNEWTRGLATKLLRSHMKTANFRWRSYPGLLPV----LHLDHIYYDPAL--SLH 209 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263 ++ P SDH P+ + Sbjct: 210 RVQVHRSPLSLL-ASDHLPLFADFKL 234 >gi|53715258|ref|YP_101250.1| hypothetical protein BF3974 [Bacteroides fragilis YCH46] gi|52218123|dbj|BAD50716.1| conserved hypothetical protein [Bacteroides fragilis YCH46] Length = 678 Score = 57.9 bits (138), Expect = 1e-06, Method: Composition-based stats. Identities = 41/284 (14%), Positives = 73/284 (25%), Gaps = 37/284 (13%) Query: 2 SVVTVATWNVN--SI---RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56 ++V V WN+ I + I+ + D+I +QE SL YH Sbjct: 409 NIVKVLQWNIWHGGIHLGNEGQQRVLDLIRSSRADVIMMQE----AYGIQQMLADSLGYH 464 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 ++T N + LR Sbjct: 465 LKT-RSLKDNLAMYSRFPLEAIAWREPFKSNPAKITLPNGKRIMFVDCWLRYAYRPEYTS 523 Query: 117 NPITSTKYDDKI----------SWIKRFLRFASQRLELEEPLIFAGDYN-IIPQPHDCYN 165 + + + LE + P+I GD+N Sbjct: 524 GYAEKGLDPSVWVAEDSILALPDIRNIYTKDIAPNLETDMPVIVTGDFNSCSHLDWTERA 583 Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG----I 221 + + + + + GF D+ R + Y + + G Sbjct: 584 KPLHHG---YGPVAFPASRYMLENGFKDSFREKNPDEIAY-----QGGTVAAIYGQMQMS 635 Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTK--PSDHTPVIVSLDI 263 RID I + S++I SDH V+ ++ Sbjct: 636 RIDFIYYKGGL--KVLSSKIVRTAPEIDYVWASDHAAVLTVFEV 677 >gi|269118848|ref|YP_003307025.1| endonuclease/exonuclease/phosphatase [Sebaldella termitidis ATCC 33386] gi|268612726|gb|ACZ07094.1| Endonuclease/exonuclease/phosphatase [Sebaldella termitidis ATCC 33386] Length = 283 Score = 57.9 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 43/275 (15%), Positives = 71/275 (25%), Gaps = 44/275 (16%) Query: 4 VTVATWNV----NSIRARIHNLAAWIKENNPDIICLQET-KTED-----KNFP-FETLQS 52 + VAT+N+ N+ + + A IK+ NPDII +QE + + L Sbjct: 35 IRVATYNIAAGANNFKVDLKLTAETIKKINPDIIAIQEVDRNTERSGRTDQIKVLSELTG 94 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 NY I + + + E + + Sbjct: 95 YNYVYGKTIDFQGGEYGIAVLSKHPIVSNEIIKLPYTNTDTKKEEEPR-----IALVTKV 149 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 G + T + + W + Q + E + I+ + N Sbjct: 150 DVPGFEVPVTFINTHLDWHEDPNIRLQQVRTINEVTLDMRGIKILAGDFNDTL-----NS 204 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 R A + ID I L+ Sbjct: 205 VIGREMERYWTTVFDGKTDHRTWPAVNPEVA-------------------IDQIFLNNAQ 245 Query: 233 TSLLHSARIDT----KPRGWTKPSDHTPVIVSLDI 263 + + K W SDH PVIV L + Sbjct: 246 VWKVEKVYVPNTGTEKDTDWKTVSDHIPVIVDLKL 280 >gi|58259579|ref|XP_567202.1| phospholipase C [Cryptococcus neoformans var. neoformans JEC21] gi|134107017|ref|XP_777821.1| hypothetical protein CNBA5190 [Cryptococcus neoformans var. neoformans B-3501A] gi|50260519|gb|EAL23174.1| hypothetical protein CNBA5190 [Cryptococcus neoformans var. neoformans B-3501A] gi|57223339|gb|AAW41383.1| phospholipase C, putative [Cryptococcus neoformans var. neoformans JEC21] Length = 529 Score = 57.9 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 42/260 (16%), Positives = 77/260 (29%), Gaps = 27/260 (10%) Query: 3 VVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKT-EDKNFPFETLQ-SL 53 + V ++NV + R RIH +A ++ ++ DI+CLQE +D E +Q +L Sbjct: 13 TLKVLSFNVWGLAIVSKDRRTRIHAIADYLASSSYDIVCLQELWIYKDYEVVREAVQRNL 72 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIV-----------THLPGDDLDVQARFIEATFTIN 102 + +G+AI +++ I GD +A Sbjct: 73 PFSRFFHTGALGSGLAIFTRFPLIAAHALPYSLSGSPAQAFAGDFFVKKAAANVVILHPV 132 Query: 103 TQTLRIGNLYLP-HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161 + I N ++ G T+ +I+ + GD+N P Sbjct: 133 LGEVEIWNTHMHAAGEHPPDTRQAHRIAQSWELANAVRGGAAKGRYVFVMGDFNSQPWSI 192 Query: 162 DCYNPIIW------ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW 215 + S + YS + Sbjct: 193 PIAMMRDHAQLMDSFGQVHPSTNSEISPPPSPAEALRVYGMTCDSPLNTYSAGKPIPEHV 252 Query: 216 SKNKGIRIDHIMLSPEATSL 235 + G R+D+I A + Sbjct: 253 LEKGGKRLDYIFFRQPAIAR 272 >gi|149916430|ref|ZP_01904949.1| prephenate dehydratase [Roseobacter sp. AzwK-3b] gi|149809700|gb|EDM69554.1| prephenate dehydratase [Roseobacter sp. AzwK-3b] Length = 305 Score = 57.9 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 39/310 (12%), Positives = 69/310 (22%), Gaps = 63/310 (20%) Query: 4 VTVATWNVNSIRARIHNL------------------------AAWIKENNPDIICLQETK 39 + +AT+NV S+R R +L A I++ + D++ LQE Sbjct: 1 MRIATFNVQSLRLRGDHLSGAHDDDTPERADPSLDHRDRLLTAQVIRDLDADVLALQEV- 59 Query: 40 TEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF 99 F L + H I + + AT Sbjct: 60 -----FDSAALDHFHDHYLIPAGMPPYPHRICLPGNDGRGLDIALLSRMTPGDVVSHATL 114 Query: 100 TINTQTLRIGNLYLPHGNPITSTKYDDK---------ISWIKRFLRFASQRLELEEPLIF 150 L + + A++ + E Sbjct: 115 RPADLGLAVPPRLRAETPIFRRDCLRVELAGLTLFLVHFKAPTPDPDAARPVRALEAAAL 174 Query: 151 AGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDY 210 +I + F+ + +S+ D Sbjct: 175 RALIEARFDDPARAMWLILGDLNDPWDAKDPPATAPVLPPFSVNLMDRLPEDARWSYHD- 233 Query: 211 YADSWSKNKGIRIDHIMLSPEATSLLHSA--RIDTKPRGWT-----------------KP 251 +WS G R D I+ SP A Sbjct: 234 ---AWSDRYG-RPDQILASPALARACPDAMPETLRHGMALEAARNDGPHLPDVGRHRPHA 289 Query: 252 SDHTPVIVSL 261 SDH +++ + Sbjct: 290 SDHAALMIEI 299 >gi|291515850|emb|CBK65060.1| Metal-dependent hydrolase [Alistipes shahii WAL 8301] Length = 313 Score = 57.9 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 37/280 (13%), Positives = 68/280 (24%), Gaps = 43/280 (15%) Query: 4 VTVATWNV-------------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETL 50 + VA++N+ N R + ++ + DI QE F E + Sbjct: 49 IRVASYNIQYDNRNEEAGRWEN----RKEIVCRLLEAEDFDIFGAQE----PYKFQIEDM 100 Query: 51 QSL--NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108 + Y S + +F + Sbjct: 101 AAALPGYTWI-----------GTSVTGEDNVERRHFNPIFYKTDKFEVLESGSFWYSETP 149 Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP------QPHD 162 + + + +K + + + Sbjct: 150 NVPNTKFSDSYSPRMCNWAHFRVKATGKEFFHFNSHFDHIGTVARAESAKLLIEKVAEIA 209 Query: 163 CYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHD--THHLYSFWDYYADSWSKNKG 220 P D + + + D+ T D S+ Y S K Sbjct: 210 GKTPAFCTGDFNSNQQTNVYNTIVTSGTLVDSYARTTDKVNADWPSYNGYKYISTPPAKA 269 Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 RIDHI ++ + + S I PSDH PV++ Sbjct: 270 SRIDHIFVTKG-RTKVQSWAIVNTSYSQKYPSDHFPVVIE 308 >gi|313206564|ref|YP_004045741.1| endonuclease/exonuclease/phosphatase [Riemerella anatipestifer DSM 15868] gi|312445880|gb|ADQ82235.1| Endonuclease/exonuclease/phosphatase [Riemerella anatipestifer DSM 15868] gi|325335988|gb|ADZ12262.1| Endonuclease/exonuclease/phosphatase [Riemerella anatipestifer RA-GD] Length = 326 Score = 57.9 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 44/264 (16%), Positives = 75/264 (28%), Gaps = 35/264 (13%) Query: 2 SVVTVATWNVNSIRARIHNLAAW---IKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 S V ++N I+A +A ++ +PDII +QE +F E ++S+ Y E Sbjct: 94 SDFKVVSFN---IKAAEAGIANIDHHLESFSPDIILIQE----KGDF-KEEIESMPYRKE 145 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + Y+ I+ I + +R N+YL Sbjct: 146 IDILEFYSKT---------PIIESGRILIDADNGYASYIDTEIKGKRIRFINVYLKPFEL 196 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + + L I + + F Sbjct: 197 NKDMVKPSTNLTVSEEKAKSLIARFLPVFKAHQTQVEQIRLAVEKSPYPVILG-GDFNAV 255 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 + TD+ +F DY IRID++ + E Sbjct: 256 PNSYEYYYLSQNMTDSFLEVGKGLGT-TFHDYKFP-------IRIDYLFSTKEIKP---- 303 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 +DT + SDH P+I Sbjct: 304 VSLDTD--RSRQLSDHCPIIGEFK 325 >gi|147838411|emb|CAN74319.1| hypothetical protein VITISV_035345 [Vitis vinifera] Length = 1802 Score = 57.9 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 21/38 (55%), Gaps = 2/38 (5%) Query: 4 VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETK 39 + + +WN + +R + +++ PDI+ +QETK Sbjct: 780 IKIISWNTRGLGSRKKRRVVKDFLRSEKPDIVMIQETK 817 >gi|147862335|emb|CAN81919.1| hypothetical protein VITISV_030820 [Vitis vinifera] Length = 1136 Score = 57.9 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 33/246 (13%), Positives = 71/246 (28%), Gaps = 30/246 (12%) Query: 16 ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75 ++ + +I+ D++C+QETK + ++SL + A Sbjct: 643 SKRKIIKTFIRNQKVDLLCIQETKIQP--MSEGVVRSLGSRRFLDWRALDADGAAGGLXI 700 Query: 76 PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135 + + D + Q + + + + Sbjct: 701 CWDKRSLEVVDWEEGQYSLXCRFKYVEDGAVWVFTGVYGPFTKEERDCL---------WE 751 Query: 136 RFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAI 195 + R +EP GD+N + T +R+ + ++G D Sbjct: 752 ELGAVRGIWDEPWCLGGDFNSTLYQRER------SRQGRITPTMRRFAHIIDDLGLVDLP 805 Query: 196 RATHDTHHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDH 254 ++++ N R+D ++SP I R SDH Sbjct: 806 L----QGGVFTW--SRGL---NNXSWARLDRFLVSPSWLDKFSGV-IQR--RLXRPVSDH 853 Query: 255 TPVIVS 260 P+++ Sbjct: 854 FPILLE 859 >gi|309798808|ref|ZP_07693072.1| exodeoxyribonuclease [Streptococcus infantis SK1302] gi|308117625|gb|EFO55037.1| exodeoxyribonuclease [Streptococcus infantis SK1302] Length = 59 Score = 57.9 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 24/50 (48%), Gaps = 10/50 (20%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDK 43 + + +WN++S+ A + ++ + N DII +QETK K Sbjct: 1 MKLISWNIDSLNAALTSDSARAKLSQDVLQTLVAENADIIAIQETKLSAK 50 >gi|153806752|ref|ZP_01959420.1| hypothetical protein BACCAC_01023 [Bacteroides caccae ATCC 43185] gi|149131429|gb|EDM22635.1| hypothetical protein BACCAC_01023 [Bacteroides caccae ATCC 43185] Length = 366 Score = 57.9 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 45/277 (16%), Positives = 82/277 (29%), Gaps = 35/277 (12%) Query: 3 VVTVATWNVNSIRARI------HNLAAWIKENNPDIICLQETKTEDKNFPFE----TLQS 52 V+TVAT+NV+ R +AA ++ DI+C QE D F + L Sbjct: 109 VLTVATYNVDGFN-REHTGYSCKEIAAQMRNLKADILCFQEF-GIDDEFGVDSLCTALSD 166 Query: 53 LNYHIETCGQKSYNGV------AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 YH + + + K + + I + L + L Sbjct: 167 WPYHYIPSSPERQHLLQLAVFSRYSIKKEHLIIYPNSGNCSLWCDIEVNGRMIRLFNNHL 226 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 + + + D+ + L A E ++ Y Sbjct: 227 QTTEVSRNKRKLEKELRQDNSQRAKRAALTLADGLHENFRKRAVQANFINQLVSASPYPT 286 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226 ++ D + H + + ++ +RID+I Sbjct: 287 LV-CGDFNSLPSSYVYHTVKGDKLLDGFQTGGHGYMYTFKYF---------KHLLRIDYI 336 Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + SPE +D W SDH PV++ + + Sbjct: 337 LHSPELK------GLDYFSPDWEY-SDHNPVVMRMKL 366 >gi|156144636|gb|ABU52967.1| hypothetical protein [Dunaliella viridis] Length = 4640 Score = 57.9 bits (138), Expect = 2e-06, Method: Composition-based stats. Identities = 44/271 (16%), Positives = 84/271 (30%), Gaps = 19/271 (7%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 + + + T NV + ++ + ++PDI+ L ETK D N L L + + Sbjct: 1902 LCSLKLFTHNVKGLNISQSDMRQALHAHDPDILVLTETKLYDSN-NKPWLNKLLKNYKWW 1960 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + ++ I ++ D + R + T Q L I Y P G+ Sbjct: 1961 SSPHGSAGTLMGIRTGIAGLSQAKLTYADQEGRLVAVTLRSQHQDLIIIGTYWPSGSSTE 2020 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + + R L + Y + + A Sbjct: 2021 AIASRHTMQGKVRDLITENHSCTPLLLGDMNATYY------NDDRSSVNVTTADRMYRAF 2074 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG------IRIDHIMLSPEATS 234 L+ + D R + +++ + + G RID I+L + Sbjct: 2075 LQEVNLKPLPEHDPGRERVNEPRPWTY--LHPTAVDSTSGNTIYTTSRIDDILLPKQLAD 2132 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 + SA T SDH P++ + + Sbjct: 2133 IFTSAVTCTNGYR----SDHIPLVAYIRLDA 2159 >gi|297170635|gb|ADI21660.1| metal-dependent hydrolase [uncultured Rhizobium sp. HF0130_09F11] gi|297171574|gb|ADI22571.1| metal-dependent hydrolase [uncultured Rhizobium sp. HF0500_10F10] Length = 248 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 38/266 (14%), Positives = 77/266 (28%), Gaps = 41/266 (15%) Query: 3 VVTVATWNVN-SI----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57 + VA++N+ S+ R R + + E + DI+ LQE + L SL Sbjct: 1 MFRVASYNIRKSVGTDWRRRPKQILDVLTELDADIVALQEV----DRRLGDRLSSL---- 52 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 S + +A ++ ++PI + + + + P G Sbjct: 53 ------SPSLIAEMTHFRPIRFGVRPGSLGWHGNTILVRKDVELLRRKRLVLPALEPRGA 106 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + + D + + + +P ++ + + Sbjct: 107 ALADLQIGDLKIRVVGMHLGLVGLWRKRQARAVLDQLASLEEPLP---TVMMGDLNQWNT 163 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 E ++ + H SF D I+ S + Sbjct: 164 EGGCLAHFAEDHHVIAPGLSFHSQMPFVSF----------------DRIITS--LDIHVD 205 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263 +A + + R SDH PV L + Sbjct: 206 AAAVHSSERARL-ASDHLPVWADLSL 230 >gi|294897088|ref|XP_002775817.1| Craniofacial development protein, putative [Perkinsus marinus ATCC 50983] gi|239882170|gb|EER07633.1| Craniofacial development protein, putative [Perkinsus marinus ATCC 50983] Length = 669 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 46/272 (16%), Positives = 81/272 (29%), Gaps = 42/272 (15%) Query: 2 SVVTVATWNVNSIRARIH-----NLAAWIKENNPD--IICLQETKTEDKNFPFETLQSLN 54 SV+ + TWNV R+++ + +K D II LQET+ ++ +SL Sbjct: 100 SVIRMYTWNV---RSQLGYANRLAVVESLKAIGSDVPIIALQETRLREEV----QGESLG 152 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 HI + ++ + I + T+ + Sbjct: 153 DHILYSSPALR-----GIGGVGFLVHPNVRVQSWVSVSNRIAHITLNSGITIVVCYAPTE 207 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 F + + LE P I GD+N +PI A Sbjct: 208 VA----------PQGQKDEFWDAVEEVVRLERPEIVCGDFNARLGSDLARDPIHGLGKAY 257 Query: 175 FTLEVRQSFQKLQNMGF-----TDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 E + +L + A HL ++ W + +DH ++ Sbjct: 258 AYEETNDNGWRLVMLAAASHMGHAASHFLKPQTHLGTWHSPVEKCWHQ-----LDHFLIR 312 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + R+ G SDH + +S Sbjct: 313 SNRKLQVLDVRVRRTVMGS---SDHCALELSF 341 >gi|149002138|ref|ZP_01827092.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP14-BS69] gi|147759947|gb|EDK66937.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP14-BS69] Length = 63 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 6/48 (12%) Query: 217 KNKGIRIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 N G RID+ + S + + ID+ R DHTP+++ +D+ Sbjct: 21 NNTGWRIDYWLTSNRIADKVTKSDMIDSGARQ-----DHTPIVLEIDL 63 >gi|312076146|ref|XP_003140730.1| hypothetical protein LOAG_05145 [Loa loa] gi|307764104|gb|EFO23338.1| hypothetical protein LOAG_05145 [Loa loa] Length = 415 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 42/295 (14%), Positives = 75/295 (25%), Gaps = 27/295 (9%) Query: 3 VVTVATWNV-------------NSIRARIHNLAAWIKENNPDIICLQETKTEDK--NFPF 47 V+ V + N +S+R I + + N DI+ L+E E Sbjct: 4 VLRVVSLNCWALPLPWPFRSNDHSLR--IKKIGEALLLNEYDIVALEEVWGEHDFLRLQE 61 Query: 48 ETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ--- 104 + Y + +G+ + S+Y + + H + F Sbjct: 62 ALKKIFGYSYYFHSGFTGSGICVFSRYPIVSTLMHRFTLNGFAHHIHRGDWFAGKGVGLV 121 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 + I + +Y+ + L +I Sbjct: 122 EIEIEQYRVNFYAAHLHAEYNPNKDLYLPHRLAQAFELAQFVKHTSYSADALILAGDFNI 181 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRID 224 P + + D + Y+ + KN G R+D Sbjct: 182 EPDNLAYQLIVQNANLRDAWIQKPNSCDDCGATFGRLDNCYT--PQRFKNK-KNYGKRLD 238 Query: 225 HIML-SPEATSLLHSARIDTKPRGWTK---PSDHTPVIVSLDIPEPRKKQQDSTS 275 +IM S + L I K SDH V + E + S Sbjct: 239 YIMYRSGRSKIELKLCEIRMNRIHDQKSINYSDHVGVYAEFSLSEQHDEITKGLS 293 >gi|167587042|ref|ZP_02379430.1| Endonuclease/exonuclease/phosphatase [Burkholderia ubonensis Bu] Length = 284 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 41/302 (13%), Positives = 80/302 (26%), Gaps = 61/302 (20%) Query: 4 VTVATWNV------NSI----R--ARIHNLAAWIKENNPDIICLQET---------KTED 42 + + WN+ + + R A L + D++CLQE E Sbjct: 1 MRLIDWNIQWGRDADGVVDLPRTIAAARGLGDF------DVLCLQEVTRGFGALAGHPEP 54 Query: 43 KNFPFETLQSLNYHI-----------ETCGQKSYNGVAILSKYQPIEIVTHLPGDD---- 87 F + + + G AI S+ ++ L Sbjct: 55 DQFAELAALLPGFTVVEAIGADLPPTAPGAPRRQFGNAIASRLPVGRVMRRLLPWPADDA 114 Query: 88 -LDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEE 146 + +E + LR+ +L + + D + R + R E Sbjct: 115 APSMPRVALEVELATASGPLRVTTTHLEYYSARQRLAQVDALHDRHREACAHADRPARAE 174 Query: 147 PLIFAGDYNIIPQPHDCYNPIIWENDACFT----LEVRQSFQKLQNMGFTDAIRATHDTH 202 P+ D+ V + + + A T Sbjct: 175 HADSPFSATAQPRDAIVCGDFNSAYDSDAYRRFLEPVEGAPRFVDAWAALHPGAAPPPTA 234 Query: 203 HLY-S-FWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 +Y + W + D + ++ + ID R SDH P+++ Sbjct: 235 GIYDTVQWSEGPLA--------CDFVFVTDTLLPRVARCEIDGDLR----ASDHQPIVLE 282 Query: 261 LD 262 L+ Sbjct: 283 LN 284 >gi|294627625|ref|ZP_06706207.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294666886|ref|ZP_06732117.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292597977|gb|EFF42132.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292603334|gb|EFF46754.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 287 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 38/274 (13%), Positives = 71/274 (25%), Gaps = 34/274 (12%) Query: 4 VTVATWNVNSIRA------------RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51 + V ++NV R R + A IK+ +PD+ QE +E F E L Sbjct: 34 LRVMSFNV---RVPADTDGDKRWQVRRAAMVALIKQTHPDVFGTQELVSEQAAFLAEQLP 90 Query: 52 SLNYHIETCGQKSYNGVA-ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 + + + + + +E+V D R T+ + Sbjct: 91 DYRWFGQGRRGDDSDEHMGVFYDARVLEVVESGNFWLSDTPERAGSITWGNVLPRMATWA 150 Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170 L+ + ++ + + + +P + Sbjct: 151 LFERRSDKRRFYLFNTHFPYRDEDEPARERSAR-----LILSRIAQLPATIPVVLTGDFN 205 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230 +D + +T ++ RID I+ Sbjct: 206 SDPDKITYPTLTAVLRDARAQASKRSGPENTFQDFTTHPTR----------RIDWILY-R 254 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 G PSDH PV+ D P Sbjct: 255 GLRPS--RFATLDDRPGGILPSDHYPVMAEFDWP 286 >gi|225439538|ref|XP_002264351.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 2042 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 17/137 (12%), Positives = 40/137 (29%), Gaps = 4/137 (2%) Query: 4 VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTED--KNFPFETLQSLNYHIET 59 + + +WNV ++ + +I+ D+IC+QETK + N + Sbjct: 800 MKILSWNVRGANDSSKRKVIKTFIRNQRVDVICIQETKIQAMSDNIARSIGSGRFLEWKA 859 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 + +G ++ + V + RF + +L+ Sbjct: 860 VNAEGASGGILMCWDKRTLEVLDWEEGQFTLSCRFRNVENGAIWIFTGVYDLFSKMEREA 919 Query: 120 TSTKYDDKISWIKRFLR 136 + + Sbjct: 920 LWDELGAIRGLWEDPWC 936 >gi|308274774|emb|CBX31373.1| hypothetical protein N47_E48850 [uncultured Desulfobacterium sp.] Length = 335 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 35/277 (12%), Positives = 69/277 (24%), Gaps = 24/277 (8%) Query: 4 VTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 + + ++N+ N + R + + PD++ LQE D P + Sbjct: 49 LKIMSFNIRRGTARDGKNHWKYRRSLVHEILDLYCPDVLGLQE--ALDFQIPEISAMLPG 106 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL-RIGNLYL 113 Y G + + + + + RI Sbjct: 107 YKNVGIGDLGGSKRLHNTIFYDANRFELSEEGTFWLSDTPDIPRSKGWGNIMPRICTWVR 166 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP-----QPHDCYNPII 168 Y + + I A Y + I Sbjct: 167 LIEKNSGQAFYFYNTHLDHLSQGSRKKSVIFLIKRIHARSYPDPFILTGDFNARERSAPI 226 Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL-YSFWDYYADSWSKNKGIRIDHIM 227 L ++ + D R H + +F + + R+D+I Sbjct: 227 QYLKGKSPLRIKTKLTVINPTPLVDTFRVRHPKNRNSVTFHGFRKYFFR----FRLDYIF 282 Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 + + A+I PSDH P+ + +P Sbjct: 283 VPSSV--RVLDAKIIQLRWKKCYPSDHFPLFTHIGLP 317 >gi|74318784|ref|YP_316524.1| hypothetical protein Tbd_2766 [Thiobacillus denitrificans ATCC 25259] gi|74058279|gb|AAZ98719.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC 25259] Length = 281 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 37/294 (12%), Positives = 73/294 (24%), Gaps = 48/294 (16%) Query: 4 VTVATWNV------NSIRARIHNLAAWIKENNP-DIICLQETKTE---------DKNFPF 47 + + +WN+ + R + L I+ D+ICLQE + F Sbjct: 1 MKLLSWNIQWGRGMDG-RVDLARLVRAIEHLGAFDVICLQEVAVNFPALPGSRGEDQFAQ 59 Query: 48 ETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107 Y G + S++ G + + Q Sbjct: 60 LAAALPGYTALYVAATDVPGASGRSRFGNAIFSRLPVGQVWRHALPWRPEAGVPSMQRAL 119 Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------- 160 + + L P+ + + L + + Sbjct: 120 LEAVILREAGPLRVLTTHLEYYSQGQRQLQIEAIRNLHAEACAMTRWAAPEEERGGPFAS 179 Query: 161 HDCYNPIIWENDACFTL----------EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDY 210 I D F+ + + H D+ Sbjct: 180 QGRPAQAILCGDMNFSPSAAERARLLAPFADATPAWVDAWTALHPGVPHPPSVGIHPVDF 239 Query: 211 --YADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + + + D + + ++ L +D + T+ SDH PV V+LD Sbjct: 240 VDHPECF--------DFVFATEGLSAALSDYGVDAE----TEASDHQPVWVALD 281 >gi|322829003|gb|EFZ32580.1| apurinic/apyrimidinic endonuclease, putative [Trypanosoma cruzi] Length = 612 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 19/145 (13%), Positives = 41/145 (28%), Gaps = 20/145 (13%) Query: 4 VTVATWNVNS-------IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFET------- 49 + + +WNV IR ++A++++ DI+CLQE K + Sbjct: 1 MFIISWNVAGWSSTSRMIREDFGSIASFLQRTQADIVCLQEVKGSWAKLEADPCGMGASD 60 Query: 50 ----LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT 105 L + + + +T + + I T Sbjct: 61 GGRTLAIDGWESFWSFSGKAHRGFNGVVSFVRKDLTWWCDSRPFSEEDLNDEGRVIVTCH 120 Query: 106 --LRIGNLYLPHGNPITSTKYDDKI 128 + N Y+ + + + Sbjct: 121 SAFVVVNTYVVNARHGQRMAFKMRF 145 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 10/37 (27%), Positives = 17/37 (45%) Query: 204 LYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 Y+ WD + +N+G RID+I++ L Sbjct: 393 PYTCWDQSRNRRQRNEGTRIDYILIDEMLLPALVPCG 429 >gi|71654548|ref|XP_815891.1| apurinic/apyrimidinic endonuclease [Trypanosoma cruzi strain CL Brener] gi|70880981|gb|EAN94040.1| apurinic/apyrimidinic endonuclease, putative [Trypanosoma cruzi] Length = 612 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 19/145 (13%), Positives = 41/145 (28%), Gaps = 20/145 (13%) Query: 4 VTVATWNVNS-------IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFET------- 49 + + +WNV IR ++A++++ DI+CLQE K + Sbjct: 1 MFIISWNVAGWSSTSRMIREDFGSIASFLQRTQADIVCLQEVKGSWAKLEADPCGMGASD 60 Query: 50 ----LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT 105 L + + + +T + + I T Sbjct: 61 GGRTLAIDGWESFWSFSGKAHRGFNGVVSFVRKDLTWWCDSRPFSEEDLNDEGRVIVTCH 120 Query: 106 --LRIGNLYLPHGNPITSTKYDDKI 128 + N Y+ + + + Sbjct: 121 SAFVVVNTYVVNARHGQRMAFKMRF 145 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 10/37 (27%), Positives = 17/37 (45%) Query: 204 LYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 Y+ WD + +N+G RID+I++ L Sbjct: 393 PYTCWDQSRNRRQRNEGTRIDYILIDEMLLPALVPCG 429 >gi|288800479|ref|ZP_06405937.1| AP endonuclease domain protein [Prevotella sp. oral taxon 299 str. F0039] gi|288332692|gb|EFC71172.1| AP endonuclease domain protein [Prevotella sp. oral taxon 299 str. F0039] Length = 363 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 43/275 (15%), Positives = 81/275 (29%), Gaps = 32/275 (11%) Query: 4 VTVATWNVNSI--------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN- 54 + V ++N+ S R + + +I + DI+CLQE E + +LN Sbjct: 100 LKVLSYNIQSFGYEPEDETRDEQNPIVQYIANSGADIVCLQE--APKWRIENEVVSTLNP 157 Query: 55 -YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY- 112 Y ++ +G + + I T D ++ N L + N Sbjct: 158 IYPYQSEVAHETSGDVLALYSKYPIISTERIPFDSEINLSVAYRIKVDNDTILVVNNHLE 217 Query: 113 ---LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 + + + +S L + Sbjct: 218 SNKMTKADKAGFKNMVKGNISNSGTKQESSLLLNKLALAAQKRAVQVKAVVSVLKKYENL 277 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI--RIDHIM 227 C + L + T + W Y+ G+ RID+I+ Sbjct: 278 PQIVCGDFNEWPNGYALNTLQKTLTNSFVETGNGA--GWSYHR------SGMYVRIDNIL 329 Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 S + A++D++ K SDH P+ L+ Sbjct: 330 CSKQFKPY--KAKVDSEI----KTSDHYPIYCYLE 358 >gi|147799536|emb|CAN64031.1| hypothetical protein VITISV_037889 [Vitis vinifera] Length = 2193 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 23/223 (10%), Positives = 53/223 (23%), Gaps = 4/223 (1%) Query: 4 VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTED--KNFPFETLQSLNYHIET 59 + + +WNV ++ + +I+ D+IC+QETK + N + Sbjct: 747 MKILSWNVRGANDSSKRKVIKTFIRNQRVDVICIQETKIQAMSDNIARSIGSGRFLGWKA 806 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 + +G ++ + V + RF + L+ Sbjct: 807 VNVEGASGGILICWDKRSLEVLDWEEGQFTLSCRFRNVENGAKWXFTGVYGLFSKMEREA 866 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + + P + + + L+ Sbjct: 867 LWDELGAIRGLWEDPWCIGGDFNITLFPRERSSQRRMNSAMRKFAEVVDDLGLMDLPLQG 926 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR 222 + A + W + +G R Sbjct: 927 GEFTWNGGQNNQVWARLDRKWVIMEETHWRQLSREIWLKEGDR 969 >gi|119192056|ref|XP_001246634.1| hypothetical protein CIMG_00405 [Coccidioides immitis RS] Length = 551 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 24/68 (35%), Gaps = 14/68 (20%) Query: 3 VVTVATWNVNSIR-----------ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51 + TWNVN IR + ++ DII LQE K + K+ + + Sbjct: 2 TFRLTTWNVNGIRNPFSYEPWRGTQSFQGMFDLLE---ADIIVLQELKIQRKDLRDDMVL 58 Query: 52 SLNYHIET 59 + Sbjct: 59 VPGWDCFF 66 >gi|301057309|ref|ZP_07198427.1| endonuclease/exonuclease/phosphatase family protein [delta proteobacterium NaphS2] gi|300448539|gb|EFK12186.1| endonuclease/exonuclease/phosphatase family protein [delta proteobacterium NaphS2] Length = 258 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 41/273 (15%), Positives = 76/273 (27%), Gaps = 24/273 (8%) Query: 4 VTVATWNV------NSIRA---RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 + V T+N+ + A R + I+ PDI+ QE + L L+ Sbjct: 1 MRVMTFNLRFENDQDGANAWSCRRDLVVKLIERYAPDILGTQEGRISP-------LAYLD 53 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 H+ + V + P L+ + ++ T I+ R + Sbjct: 54 AHLTKYDIHMPSRVIDKTCQYPTLFFRRDRFRILEGKEFWLSKTPGIH----RSKDWDSA 109 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 +++ + + S + + + + I+ + Sbjct: 110 FPRMVSTATLELRESGRIFSVAVTHLDHMGQTARLKQAEIISRWVREKTVPVILMGDFND 169 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 + G +D + SF + K RID I+ S Sbjct: 170 GPHSDAHAVLASSQTGLSDVWQVLGHAEGKESFTHHGFTGVPKKS--RIDWILSSKP--P 225 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPR 267 AR+ PSDH P V P Sbjct: 226 YAVDARLLHDQFDGRYPSDHFPYYVDFTWKNPE 258 >gi|284039609|ref|YP_003389539.1| endonuclease/exonuclease/phosphatase [Spirosoma linguale DSM 74] gi|283818902|gb|ADB40740.1| Endonuclease/exonuclease/phosphatase [Spirosoma linguale DSM 74] Length = 299 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 40/267 (14%), Positives = 76/267 (28%), Gaps = 32/267 (11%) Query: 6 VATWNV------NSIRA---RIHNLAAWIKENNPDIICLQETKTEDKNF----PFETLQS 52 VAT+N+ + I A R N+ A I+ + D+ QE Sbjct: 47 VATYNLRYNNKGDGINAWPNRKENVKALIRFHEFDLFGTQE--ALRDQLNDVAELNEFAF 104 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 L + + + K + + + + + + + + Sbjct: 105 LGAGRDDGKEAGEHSAVFYRKDRFKPLQSGNF-WLSETPDKPGKGWDATCCNRICSWAKF 163 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 + R S +L +E+ A + P+I D Sbjct: 164 NDLKTKKDFYFFSVHFDHQGVEARRQSGKLMVEKIKEIAKN-----------TPVILVGD 212 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 T + Q + + +F + D+ N RID+I S + Sbjct: 213 LNSTPDTEQVRTIKTLLNDAHDVTKMPPYGPEGTFNSFKFDAPMDN---RIDYIFTSKQF 269 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIV 259 + + T + PSDH PV+ Sbjct: 270 D--VLKYGVLTDAKEQRYPSDHQPVVA 294 >gi|86359644|ref|YP_471536.1| putative endonuclease/exonuclease/phosphatase protein [Rhizobium etli CFN 42] gi|86283746|gb|ABC92809.1| putative endonuclease/exonuclease/phosphatase protein [Rhizobium etli CFN 42] Length = 239 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 12/63 (19%) Query: 201 THHLYSFWDYYADSWSKNKGIR--IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVI 258 YS+ D + G R +D+ +S L SARIDT+ G SDH PV Sbjct: 185 RPGSYSWMD------PADHGKRMHLDYCFVSCGLEGRLKSARIDTQSLG----SDHFPVW 234 Query: 259 VSL 261 + + Sbjct: 235 IEI 237 >gi|115904077|ref|XP_788597.2| PREDICTED: similar to bucentaur [Strongylocentrotus purpuratus] gi|115936086|ref|XP_001188674.1| PREDICTED: similar to bucentaur [Strongylocentrotus purpuratus] Length = 389 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 36/271 (13%), Positives = 83/271 (30%), Gaps = 19/271 (7%) Query: 6 VATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + TWNV ++ ++ L +++ ++I + ET ++ Y + ++ Sbjct: 61 IGTWNVRTLNQDGKLDILLNQLEKFKWEVIGVSETHWKESG----DFTEGGYKVLCASEE 116 Query: 64 S-YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 + L + + T T +++ + + T Sbjct: 117 DVHRRGVALILNKQAQKALLGYNTISPRLISARFQTQTGALTIIQVYAPNMADREEMIDT 176 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 YD I ++ + D++ + E + Sbjct: 177 FYDQLQQTIDDTPNKDILIVQGDLNAKVGRDWDT----WKNVIGHHGYGEMNNRGEKLLN 232 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F N+ + + +++ D +KNK ID +M++ + S + A Sbjct: 233 FCMANNLAIANTMFKQKKASREWTWES--PDGRTKNK---IDFVMVNNKWKSSVQCA--- 284 Query: 243 TKPRGWTKPSDHTPVIVSLDIPEPRKKQQDS 273 SDH VI + + K +Q+ Sbjct: 285 RSFPSADVASDHQLVICNFKLRFKTKPKQNV 315 >gi|90419844|ref|ZP_01227753.1| endonuclease/exonuclease/phosphatase family protein [Aurantimonas manganoxydans SI85-9A1] gi|90335885|gb|EAS49633.1| endonuclease/exonuclease/phosphatase family protein [Aurantimonas manganoxydans SI85-9A1] Length = 248 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 38/266 (14%), Positives = 76/266 (28%), Gaps = 41/266 (15%) Query: 3 VVTVATWNVN-SI----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57 + VA++N+ S+ R R + + E + DI+ LQE + L SL Sbjct: 1 MFRVASYNIRKSVGTDWRRRPKQILDVLTELDADIVALQEV----DRRLGDRLSSL---- 52 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 S +A ++ ++PI + + + + P G Sbjct: 53 ------SPGLIAEMTHFRPIRFGVRPGSLGWHGNTILVRKDVELLRRKRLVLPALEPRGA 106 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + + D + + + +P ++ + + Sbjct: 107 ALADLQIGDLKIRVVGMHLGLVGLWRKRQARAVLDQLASLEEPLP---TVMMGDLNQWNT 163 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 E ++ + H SF D I+ S + Sbjct: 164 EGGCLAHFAEDHHVIAPGLSFHSQMPFVSF----------------DRIITS--LDIHVD 205 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263 +A + + R SDH PV L + Sbjct: 206 AAAVHSSERARL-ASDHLPVWADLSL 230 >gi|307702381|ref|ZP_07639338.1| hypothetical protein SMSK23_0224 [Streptococcus oralis ATCC 35037] gi|307624058|gb|EFO03038.1| hypothetical protein SMSK23_0224 [Streptococcus oralis ATCC 35037] Length = 59 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 23/50 (46%), Gaps = 10/50 (20%) Query: 4 VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDK 43 + + +WN++S+ A + + + N DII +QETK K Sbjct: 1 MKLISWNIDSLNAALTSDSARAKLSQEVLQTLVAENADIIAIQETKLSAK 50 >gi|326798886|ref|YP_004316705.1| endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21] gi|326549650|gb|ADZ78035.1| Endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21] Length = 378 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 47/278 (16%), Positives = 79/278 (28%), Gaps = 26/278 (9%) Query: 2 SVVTVATWNVNSIR-----ARIH---NLAAWIKENNPDIICLQE--TK------TEDKNF 45 S + V T+NV+ R R + I +PDI+C+QE T+ + Sbjct: 111 SSIRVLTYNVHLFRKEDQDVRPKTKTAVTELILSVSPDIVCMQEFYTRKKGKYNSRQNMA 170 Query: 46 PFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT 105 P L +H + G+ ILS+Y + R I A N + Sbjct: 171 PALGLSYSYFHPVVENEYEAYGLIILSRYPIKNAGSIPNYQGKRTLNRAIYADIVKNGRA 230 Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165 R+ N++L K + F + + + Q Sbjct: 231 FRVYNIHLQSIGFQPQDYAFVKDVKSRSFENDNVASTKRIGSRLKHAFFERSEQAKRIKE 290 Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225 I + + + Y + + ID+ Sbjct: 291 EINRCRKPVIITGDFNDTPLSFAVHTVSSDLNNSFEKKGAGWGITYNGEFPNFQ---IDY 347 Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 I+ S + +I K K SDH V L + Sbjct: 348 ILSSKTFE--VKHYQILKK-----KLSDHYAVWSDLSL 378 >gi|301760096|ref|XP_002915856.1| PREDICTED: 5'-tyrosyl-DNA phosphodiesterase-like, partial [Ailuropoda melanoleuca] Length = 366 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 47/285 (16%), Positives = 80/285 (28%), Gaps = 59/285 (20%) Query: 2 SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 SV + TWNV+ + RAR + +++ NPD+I LQE P Sbjct: 116 SVFSFITWNVDGLDLNNLQERAR--GVCSYLTLYNPDVIFLQEV------IPP------- 160 Query: 55 YHIETCGQKSYNGVAI-LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 Y + S + + I+ Q + L + Sbjct: 161 YCSYLKKRASSYEIITGHEEGYFTAIMLKKSRVKFKSQEIIPFPNTKMMRNLLCVYASVS 220 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + + ++ + K + L+ Q +I+ D Sbjct: 221 GNELCLMTSHLESTRGHAKERMNQFKTVLK-------------KMQEAPESATVIFAGDT 267 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG------IRIDHIM 227 L + H Y+ WD + N G +R D I Sbjct: 268 NLRDHEVTKCGGLPSNILDVWEFLGKPKHCQYT-WDTQMNC---NLGIAPACKLRFDRIF 323 Query: 228 LSPEATSLLHSARIDT---KPRGWTK------PSDHTPVIVSLDI 263 + S I + G K PSDH ++ +LD+ Sbjct: 324 ----FRTAAESGHIVPQSLELLGLEKLDCGRFPSDHWGLLCNLDV 364 >gi|194290013|ref|YP_002005920.1| hypothetical protein RALTA_A1916 [Cupriavidus taiwanensis LMG 19424] gi|193223848|emb|CAQ69857.1| conserved hypothetical protein; Endonuclease/Exonuclease/phosphatase family [Cupriavidus taiwanensis LMG 19424] Length = 284 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 35/303 (11%), Positives = 76/303 (25%), Gaps = 62/303 (20%) Query: 4 VTVATWNV------NSIRARIHNLAAWIKE-NNPDIICLQET-------KTEDKNFPFET 49 + + +WN+ + R + ++ + D+ICLQE + E Sbjct: 1 MELISWNIQWGRGADG-RVDLARQVDTLRAMADADVICLQEVTRGFTELRGEPGIDQVAE 59 Query: 50 LQSL--NYHIETCGQKSYNGVAILSKYQPIEIVTH---LPGDDLDVQARFIEATFTINTQ 104 L +L YH+ K + T + ++ Sbjct: 60 LTALLPGYHVLFASGVDRRDRNGAHKQFGNLVATRLPVREVFRHALPWPADPHVASMPRV 119 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLI--------------- 149 L + P + T + + + A + ++ Sbjct: 120 ALEVTVEAGPRRLRVICTHLEYYSALQRAAQAEALRDWHVQACDHASRPGRSEKWPGPFT 179 Query: 150 ---------FAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHD 200 GD+N P + +D T + Sbjct: 180 PEPRPAEAILCGDFNSKPDDIAYRRMLEPFDDTT-TPWRDAWLHAHPGLPHAPTCAIHDK 238 Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 W + D + ++ + + ++ SDH P+++S Sbjct: 239 EQ-----WPEPPFA--------CDFMFVTENLAARIRRCEVNADTAD----SDHQPILLS 281 Query: 261 LDI 263 LD+ Sbjct: 282 LDL 284 >gi|147798345|emb|CAN70146.1| hypothetical protein VITISV_030351 [Vitis vinifera] Length = 1115 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 22/38 (57%), Gaps = 2/38 (5%) Query: 4 VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETK 39 + + +WN + ++ + +++ NPD++ LQETK Sbjct: 411 MKIISWNTRGLGSKKKRMVVKDFLRLQNPDVVMLQETK 448 >gi|326433631|gb|EGD79201.1| hypothetical protein PTSG_12954 [Salpingoeca sp. ATCC 50818] Length = 844 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 30/221 (13%), Positives = 66/221 (29%), Gaps = 17/221 (7%) Query: 3 VVTVATWNVNS-------IRARIHNLAAWIKENNPDIICLQETKTEDKNFPF-------- 47 ++ + WNV I R ++A W+ +N DI+CLQE K Sbjct: 2 MLHLVCWNVAGWATTVDCINRRHGDVATWLAKNKIDILCLQEVKVTASRLAEQPKLAGVT 61 Query: 48 -ETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 L+ + C + G ++ + + A E + Sbjct: 62 PALLEKYDCFFSCCSAGTSRGFNGVATFARKGLTISADPQPFADHALDCEGRAIVTVHDG 121 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI-IPQPHDCYN 165 + S + K+ +++ + ++ GD+NI ++ Sbjct: 122 FAILNVYVPNDGAGSRRLPFKMRFLRAMEDCMQRLRNRGFKVLAVGDFNIGRRPEDISWD 181 Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYS 206 I + +E+ ++ + A +H + Sbjct: 182 HRILNVSSFMRMELPEADASRDERFLSSLFSAPCCSHCGWH 222 Score = 44.0 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 20/140 (14%), Positives = 38/140 (27%), Gaps = 9/140 (6%) Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDY--------NIIP 158 R+ Y + IK L + D + Sbjct: 424 RVRLGQPCETRARAEHMYTFEKRVIKDDDGTGDAYLVRGADEMCIADIVECLDKIAGVSL 483 Query: 159 QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHH-LYSFWDYYADSWSK 217 ++ V+ L+ G D + + ++ D Y + + Sbjct: 484 ADWQQRCLGMFALPISSPPCVQWLNTLLEKRGCVDVFTSCYPNAQARFTCHDQYKNRRYE 543 Query: 218 NKGIRIDHIMLSPEATSLLH 237 NKG RID+I+L + + Sbjct: 544 NKGSRIDYIVLDGDWKHRVV 563 >gi|308067067|ref|YP_003868672.1| hypothetical protein PPE_00252 [Paenibacillus polymyxa E681] gi|305856346|gb|ADM68134.1| Conserved hypothetical protein [Paenibacillus polymyxa E681] Length = 273 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 38/286 (13%), Positives = 75/286 (26%), Gaps = 39/286 (13%) Query: 4 VTVATWNVNSIRAR--------IHNLAAWIKENNPDIICLQETKTEDKNFPF--ETLQSL 53 + + T N + A + LAA+I E D+I LQE + P + L + Sbjct: 1 MKLLTLNAH---AWMEENQHDKLKQLAAFIDEQQFDVIALQEVNQSMEETPLSPDDLGAY 57 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 Y + + A + + A++ E ++ + Sbjct: 58 -YSADPEVGIKRDNYAYVLNGLLSDSYHWTWAPAHIGFAKYDEGLAILSKTPITATVNEY 116 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 KI I+ + + Sbjct: 117 VSSLQDYDNYRSRKIVGIQTVVGGVQAWFVSGHYNWWND-------EESFRGLWDRTTKV 169 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG------------- 220 + F + +D + D Y ++ +++G Sbjct: 170 LHSFAPTPVFMMGDFNNAAEVRGEGYDYVLQSGWSDTYPNAAVRDEGHTVIKAIAGWESN 229 Query: 221 ---IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +RID I + + S+ + + SDH V V L + Sbjct: 230 AEPLRIDFIFSNKAV--QVQSSTVVLNGKTGRVVSDHFGVAVELKL 273 >gi|194292124|ref|YP_002008031.1| endonuclease/exonuclease/phosphatase [Cupriavidus taiwanensis LMG 19424] gi|193226028|emb|CAQ71975.1| putative endonuclease/exonuclease/phosphatase [Cupriavidus taiwanensis LMG 19424] Length = 293 Score = 57.5 bits (137), Expect = 2e-06, Method: Composition-based stats. Identities = 39/273 (14%), Positives = 75/273 (27%), Gaps = 53/273 (19%) Query: 4 VTVATWNVNSIRA-------RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56 +TV ++N++ RA R +AA + E + DI+ LQE Sbjct: 43 MTVVSYNIH--RAVGTDRRYRPQRIAAVLAELDADIVALQEV------------------ 82 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 + S +E + G V + F T++ + Sbjct: 83 -----------ESGSSNDHTLEFLAGETGM--HVVSGFTRVRGTVDYGNALLTRFAPEAV 129 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 N I T + + + + A + P + A Sbjct: 130 NQIDLTVKGCEPRGAIDAIVTCTASGCANPLRVIATHLGLRPGERRHQVQQLLNYVATAP 189 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYS----FWDYYADSWSKNKGIRIDHIMLSPEA 232 + + ++ + ++ +D I +SP Sbjct: 190 PLPTILLGDVNEWFLWGRPLRWLHAYFEHTPHTATFPSRLPVFA------LDRIWVSPR- 242 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 + L S P SDH P++ ++PE Sbjct: 243 -AHLVSVASHRSPLARV-ASDHLPLVACFEVPE 273 >gi|327403697|ref|YP_004344535.1| Endonuclease/exonuclease/phosphatase [Fluviicola taffensis DSM 16823] gi|327319205|gb|AEA43697.1| Endonuclease/exonuclease/phosphatase [Fluviicola taffensis DSM 16823] Length = 264 Score = 57.1 bits (136), Expect = 2e-06, Method: Composition-based stats. Identities = 37/263 (14%), Positives = 69/263 (26%), Gaps = 52/263 (19%) Query: 4 VTVATWN--------VNSIRARIHNLAAWIKENNPDIICLQETK--TEDKNFPFETLQSL 53 + + TWN +NSI + + + D+ L E + + + E ++S Sbjct: 32 MKITTWNLQHGGGKRINSIITSLK------ENIDTDLFILTEFRNNSGSELLKRELIES- 84 Query: 54 NYHIET--CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 Y + N V I SK + + + + I Sbjct: 85 GYTCLYTVDCPPTVNSVLIASKTEFSSTS-------FEELEEHKNRIIKLENSSFTIYGC 137 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 Y P K + + F + Sbjct: 138 YFPLNEHKRKVFEFLLNEIDKNTTKNIIITGDYNTGKHFQDEKGATFIDSGY-------- 189 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 K + G D R + YS++ + + R+DH + + Sbjct: 190 -----------LNKFEEKGLIDVWRNLNPDKKEYSWYSSAGNGF------RLDHFYIHSQ 232 Query: 232 ATSLLHSARIDTKPRGWTKPSDH 254 + + + K R K SDH Sbjct: 233 LNDQVVNCYYEHKYREN-KISDH 254 >gi|322421580|ref|YP_004200803.1| endonuclease/exonuclease/phosphatase [Geobacter sp. M18] gi|320127967|gb|ADW15527.1| Endonuclease/exonuclease/phosphatase [Geobacter sp. M18] Length = 258 Score = 57.1 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 45/284 (15%), Positives = 83/284 (29%), Gaps = 55/284 (19%) Query: 2 SVVTVATWNVNSIRARIHN---------LAAWIKENNPDIICLQET---KTEDK------ 43 TV T+NV+ R+ +A I PDII LQE ++ + Sbjct: 6 CTFTVMTYNVH----RLTGNDRHTSAARVAQVIDTYRPDIIALQELPGARSRPEVGGACQ 61 Query: 44 NFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 + E ++ G + S++ + G + + R + + Sbjct: 62 DLAHELALLAPRENHYQMERERWGNVVFSRHPMRLVRAG--GLHPENRYRTMVPRGVLWV 119 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 + G + T + E P++ GD+N +P Sbjct: 120 EIDICGQKLQLVNTHLGLTPRERNYQAKVLAGPEWLAHPECRPPVLLCGDFNALPSWSIH 179 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223 L + + ++F +R Sbjct: 180 KR----------------LKNALMDEQESLKFGH-----TKFTFPSNLPI-------VRF 211 Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPR 267 DHI +SP+ + + + + T SDH P+IV L + P Sbjct: 212 DHIFISPDLA---VESELIPRTKLTTVASDHLPLIVKLRLACPE 252 >gi|257126278|ref|YP_003164392.1| endonuclease/exonuclease/phosphatase [Leptotrichia buccalis C-1013-b] gi|257050217|gb|ACV39401.1| Endonuclease/exonuclease/phosphatase [Leptotrichia buccalis C-1013-b] Length = 263 Score = 57.1 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 35/273 (12%), Positives = 74/273 (27%), Gaps = 25/273 (9%) Query: 4 VTVATWNVNSIRARIHN--------LAAWIKENNPDIICLQET-KTEDKNFPFETLQSLN 54 + + T NV+ A + LA I E D+I +QE + + F+ ++ N Sbjct: 1 MKILTVNVH---AWLEENQMEKIDILARTIAEKQYDVIAMQEVNQLMNNKIIFDDIREEN 57 Query: 55 Y-HIETCGQKSYNGVAILSKYQPIEIVTHLPGD----DLDVQARFIEATFTINTQTLRIG 109 Y + + Y + I + + + + + Q++R Sbjct: 58 YAWVLLETLQKYTDTDYYLHWSNSHIGFGKYNEGVAVITRHKIKAEDEFYCTFAQSVRTI 117 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 + I D + L + + Sbjct: 118 SARRIVSITINYEGQDIEFYSCHMNLPNCETEDMGKNIQTILNRTQNSNLKILMGDFNTD 177 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 E S + WD + +K R+D+I + Sbjct: 178 AIGNVAAYENILSQGLFDTYVMAEKKDDGITVDKSIHGWD---NDKAKK---RLDYIFSN 231 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 E + +++ + SDH + V ++ Sbjct: 232 KEL--KVKESKVIFNNKNKEIVSDHFGIEVKIE 262 >gi|62733010|gb|AAX95129.1| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] gi|62733115|gb|AAX95232.1| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 1324 Score = 57.1 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 34/267 (12%), Positives = 66/267 (24%), Gaps = 46/267 (17%) Query: 4 VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + WN + + L KE++PDI+ L TK + Sbjct: 448 MKIIAWNCRGLGNGPTVRGLLNLQKEDDPDILFLSNTKMDTNKL---------------- 491 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 Q +P + + + + + Sbjct: 492 -------------QCFRWKLGMPNLVVKDCQGKSGGLAVFWKKEINLRLRTVSRLFMDVD 538 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 DD W + + + + N E + E Sbjct: 539 VMEDDGFWWRFTGVYGEPRSDKKDLTWKALRTLNATKGELWLCVGDFNEVLFSWEKERGH 598 Query: 182 SFQKLQNMGFTDAIRAT-----HDTHHLYSF---WDYYADSWSKNKGIRIDHIMLSPEAT 233 + + F + T +++ W + R+D + + Sbjct: 599 AKAQSCMDRFRQTLDCCSLSNLGFTGDPFTWRNNWCVRDGYIRE----RLDRAVADSDWC 654 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVS 260 S R+ G + SDH PVIV+ Sbjct: 655 CRFPSFRVRK---GDPRHSDHHPVIVT 678 >gi|241661977|ref|YP_002980337.1| endonuclease/exonuclease/phosphatase [Ralstonia pickettii 12D] gi|240864004|gb|ACS61665.1| Endonuclease/exonuclease/phosphatase [Ralstonia pickettii 12D] Length = 248 Score = 57.1 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 35/276 (12%), Positives = 82/276 (29%), Gaps = 46/276 (16%) Query: 1 MSVVTVATWNVN----SI--RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 M + VAT+N++ I R R+H++ + + DI+ LQE + + L N Sbjct: 1 MLRLRVATYNIHKGVTGIARRVRVHDVRQGLHTMDADIVFLQEVQDRNDRLVAAELFDPN 60 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 Y + Y + + + + ++ L I + Sbjct: 61 Y--------TQLRYLATDVYPHTVYGRNAVYEHGHHGNAILSRFPILLSENLDISDHRFE 112 Query: 115 HGNPITSTKY--DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD---CYNPIIW 169 + + ++ + ++ + + + +++P + W Sbjct: 113 QRGLLHAVTDLGFGEVHLLCAHFGLFARSRQRQAEALVDRVRSVVPPDAPLVVAGDFNDW 172 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 N + ++ + T + + +R+D I + Sbjct: 173 NNRLDRMICQALGATEVADKAADARPVRTFPSQMPW---------------LRLDRIYV- 216 Query: 230 PEATSLLHSARIDTKP----RGWTKPSDHTPVIVSL 261 I+ R W + SDH P++ L Sbjct: 217 -------RGFDIERAHALTGREWAQRSDHVPLLAEL 245 >gi|325954373|ref|YP_004238033.1| endonuclease/exonuclease/phosphatase [Weeksella virosa DSM 16922] gi|323436991|gb|ADX67455.1| Endonuclease/exonuclease/phosphatase [Weeksella virosa DSM 16922] Length = 320 Score = 57.1 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 41/259 (15%), Positives = 78/259 (30%), Gaps = 42/259 (16%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64 VA+ N+ S + ++ L +I + D++ LQE T+ +N Y+ E + Sbjct: 103 KVASVNIYSQNSDVYTLMQFINKEKADLVLLQEVTTKWQNNLDNLRTLYPYYHEEVRDNN 162 Query: 65 YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124 + +V + D T+ +G + Sbjct: 163 FGIALYSRYPIDSLVVKNYIDDRHPSLWA-----------TISVGEKKIQVLGTHPVPPL 211 Query: 125 DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ 184 ++ + KR L+ + ++ + I+ D TL + Sbjct: 212 PNQARFEKRNLQLELMKKDI---------------EESDHENILLVGDLNCTLFSPNINK 256 Query: 185 KLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK 244 + + W+ + + N IDHI +S + Sbjct: 257 IKNDKLKDARLGFGFQNS-----WNAFVPIFRTN----IDHIWVSKNIK-------VTNF 300 Query: 245 PRGWTKPSDHTPVIVSLDI 263 RG SDH P+I L I Sbjct: 301 YRGDFIESDHFPIIAELKI 319 >gi|295135375|ref|YP_003586051.1| endonuclease/exonuclease/phosphatase family protein [Zunongwangia profunda SM-A87] gi|294983390|gb|ADF53855.1| endonuclease/exonuclease/phosphatase family protein [Zunongwangia profunda SM-A87] Length = 258 Score = 57.1 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 43/276 (15%), Positives = 78/276 (28%), Gaps = 33/276 (11%) Query: 1 MSVVTVATWNV---------NSIRARIHNLAAWIKEN----NPDIICLQETKTEDKNFPF 47 S V + T+N+ NS R WI PDI +QE + Sbjct: 2 FSQVKLMTYNIKYANENDAENSWSYRK----DWITSQIKFYEPDIFGVQE--ALQVQIDY 55 Query: 48 ETLQSLNY-HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 + NY HI + + E L + + + + Sbjct: 56 FSEHMPNYKHIGVGRDDGMKKGEYSAIFYNSEKFKVLKNNTFWLNETPTKIKKGWDAALP 115 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 RI L + + ++ + +L I + P Sbjct: 116 RICTYGLFENKKTGEKFWYFNTHFDHVGVKARQESAKLIFEKITELNTQDYPVVLSGDFN 175 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226 ++ + + L + K Y ++S+ RID++ Sbjct: 176 LMPDTKSIQYLSEQMIDAKGAADLVFGPEG------------TYNGFNFSEPVTRRIDYV 223 Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 LS + + + + PSDH PV+V L+ Sbjct: 224 FLSNN-GFQVKKYAVLSDSKDLKYPSDHLPVMVELE 258 >gi|74004148|ref|XP_535904.2| PREDICTED: similar to TRAF and TNF receptor-associated protein [Canis familiaris] Length = 353 Score = 57.1 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 44/285 (15%), Positives = 79/285 (27%), Gaps = 59/285 (20%) Query: 2 SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 S+ + TWNV+ + RAR + +++ +PD++ LQE P Sbjct: 103 SMFSFITWNVDGLDLNNLQERAR--GVCSYLTLYSPDVVFLQEV------IPP------- 147 Query: 55 YHIETCGQKSYNGVAI-LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 Y + + + I+ Q + L + Sbjct: 148 YCSYLKKRAHSYEIITGHEEGYFTAIMLKKSRVKFKSQEIIPFPNTKMMRNLLCVYASIS 207 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + + ++ + K + L+ Q +I+ D Sbjct: 208 GNELCLMTSHLESTRGHAKERMNQLKMVLK-------------KMQEAPESATVIFAGDT 254 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG------IRIDHIM 227 L + H Y+ WD +S N G +R D I Sbjct: 255 NLRDHEVTKCGGLPSNILDVWEFLGKPKHCQYT-WDTQMNS---NLGISATCKLRFDRIF 310 Query: 228 LSPEATSLLHSARIDT---KPRGWTK------PSDHTPVIVSLDI 263 + S I G K PSDH ++ +LD+ Sbjct: 311 ----FRTAAESGHIVPQSLDLLGLEKLDCGRFPSDHWGLLCNLDV 351 >gi|332041904|gb|EGI78248.1| endonuclease/exonuclease/phosphatase [Hylemonella gracilis ATCC 19624] Length = 264 Score = 57.1 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 39/288 (13%), Positives = 91/288 (31%), Gaps = 69/288 (23%) Query: 2 SVVTVATWNVN----SI----RARIHNLAAWIKENNPDIICLQETK----------TEDK 43 + + VAT+N++ + R IHNL+ +++ + DI+CLQE + + Sbjct: 22 ATLRVATYNIHKGVLGLGPRRRLEIHNLSLAVEQLDADIVCLQEVRKLNHREAAHFSRWP 81 Query: 44 NFP-FETLQSLNYHIET----CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT 98 P + L Y + +G A+LS++ + D Q + Sbjct: 82 ELPQADYLAPEGYEAIYRTNAYTRHGEHGNAMLSRWPVLSAGHEDMSDHRFEQRGLLHGV 141 Query: 99 FTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP 158 +++ Q++ + ++L + +I+R + + + + + + Sbjct: 142 VSVHGQSVHVLVVHLGLIRASRVRQAAQLDQYIRREIPTEAPLIVAGDFNDWGERVH--- 198 Query: 159 QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN 218 + + A Sbjct: 199 ------------------RHFERMGLQTCEPAAHPTFPARLPLVQ--------------- 225 Query: 219 KGIRIDHIMLSPEATS-LLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 +D++ + T + + + R W + SDH P+I +P+ Sbjct: 226 ----LDYVYV-RGLTPLRV----VVPRGRAWWRMSDHLPLIAEFTLPQ 264 >gi|115803132|ref|XP_001198853.1| PREDICTED: similar to endonuclease-reverse transcriptase [Strongylocentrotus purpuratus] gi|115943868|ref|XP_001196835.1| PREDICTED: similar to endonuclease-reverse transcriptase [Strongylocentrotus purpuratus] Length = 1030 Score = 57.1 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 35/270 (12%), Positives = 82/270 (30%), Gaps = 19/270 (7%) Query: 6 VATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + TWNV ++ ++ L +++ ++I + ET ++ Y + ++ Sbjct: 61 IGTWNVRTLNQDGKLDILLNQLEKFKWEVIGVSETHWKESG----DFTEGGYKVLCASEE 116 Query: 64 S-YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 + L + + T +++ + + T Sbjct: 117 DVHRRGVALILNKQAQKALLGYNTISPTLISARFQTQAGALTIIQVYAPNMADREEMIDT 176 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 YD I ++ + D++ + E + Sbjct: 177 FYDQLQQTIDDTPNKDILIVQGDLNAKVGRDWDT----WKNVIGHHGYGEMNNRGEKLLN 232 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F N+ + + +++ D +KNK ID +M++ + S + A Sbjct: 233 FCMANNLAIANTMFKQKKASRAWTWES--PDGRTKNK---IDFVMVNNKWKSSVQCA--- 284 Query: 243 TKPRGWTKPSDHTPVIVSLDIPEPRKKQQD 272 SDH VI + + K +Q+ Sbjct: 285 RSFPSADVASDHQLVICNFKLRFKTKPKQN 314 >gi|124808986|ref|XP_001348459.1| exodeoxyribonuclease III, putative [Plasmodium falciparum 3D7] gi|23497353|gb|AAN36898.1|AE014820_48 exodeoxyribonuclease III, putative [Plasmodium falciparum 3D7] Length = 876 Score = 57.1 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 40/118 (33%), Gaps = 11/118 (9%) Query: 1 MSVVTVATWNVNS-------IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFE----T 49 M + +A+WNVN I+ +L ++K+ + DI+CLQETKT + + Sbjct: 1 MEKIGLASWNVNGWKKSCEIIKRNDDDLVQFLKKLDIDILCLQETKTNESVIENDCNLLE 60 Query: 50 LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107 S Y K G Y + + + ++ Sbjct: 61 ADSNMYESYWTCCKKKKGDKTHKGYSGLATYVKNENKIICSTNNVFDDFSFFFNDYIK 118 Score = 44.8 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 20/108 (18%), Positives = 34/108 (31%), Gaps = 2/108 (1%) Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 KY K + +++ + L+ NI HD N + Sbjct: 538 CKYKYKNNINGQYMVKNPNCIYLKHLNDIFISLNINLSEHDLLNIANSIGEPSSPPCCVD 597 Query: 182 SFQK-LQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIM 227 + + D H + ++ WD Y N+G RID+I Sbjct: 598 IIKNLIYEDNMIDTFSFFHPNVNGKFTCWDTYRQCRVHNEGSRIDYIF 645 >gi|70949281|ref|XP_744066.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56523858|emb|CAH80801.1| hypothetical protein PC000247.04.0 [Plasmodium chabaudi chabaudi] Length = 53 Score = 57.1 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 7/50 (14%) Query: 1 MSVVTVATWNVNSIRA----RIHN---LAAWIKENNPDIICLQETKTEDK 43 M + + +WNVN + N + ++++ + DI+CLQETKT D Sbjct: 1 MEKLHIVSWNVNGWKKSCEIIKKNGISVEDFLEKLDIDILCLQETKTNDG 50 >gi|87306888|ref|ZP_01089034.1| hypothetical protein DSM3645_00505 [Blastopirellula marina DSM 3645] gi|87290261|gb|EAQ82149.1| hypothetical protein DSM3645_00505 [Blastopirellula marina DSM 3645] Length = 253 Score = 57.1 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 36/254 (14%), Positives = 67/254 (26%), Gaps = 23/254 (9%) Query: 9 WNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGV 68 WN+ R + I+ + D++ QE + + E L + + + K G Sbjct: 17 WNI-----RKPLVIETIERYDSDLLGTQECLPFQEAYLREKLPQYDCYAVSREGKGTAGE 71 Query: 69 AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKI 128 Y+ G + + + ++ RI ++ + + + Sbjct: 72 ECAIFYRKSRFELLDQGSIALSETPEKIGSVSWDSSLPRI-ASWVKLRDKQSGHAFTFWN 130 Query: 129 SWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN 188 + + P + L Sbjct: 131 THFDHRGPKSRTEAAKLLVDQMKATTESGPVVLTGDFNADAGSSPHQALATYLRDSWKSA 190 Query: 189 MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGW 248 A ++ W K+KG RID I S + ID Sbjct: 191 KWEGSAWT--------FNGWS------DKSKGARIDWIFHSQGF--QATDSTIDRWKSDQ 234 Query: 249 TK-PSDHTPVIVSL 261 + PSDH PV +L Sbjct: 235 GRYPSDHCPVTTTL 248 >gi|297171763|gb|ADI22754.1| metal-dependent hydrolase [uncultured Rhizobium sp. HF0500_29J11] Length = 248 Score = 57.1 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 38/266 (14%), Positives = 76/266 (28%), Gaps = 41/266 (15%) Query: 3 VVTVATWNVN-SI----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57 + VA++N+ S+ R R + + E + DI+ LQE + L SL Sbjct: 1 MFRVASYNIRKSVGTDWRRRPKQILDVLTELDADIVALQEV----DRRLGDRLSSL---- 52 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 S +A ++ ++PI + + + + P G Sbjct: 53 ------SPGLIAEMTHFRPIRFGVRPGSLGWHGNTILVRKDVELLRRKRLVLPALEPRGA 106 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + + D + + + +P ++ + + Sbjct: 107 ALADLQIGDLKIRVVGMHLGLVGLWRKRQARAVLDQLASLEEPLP---TVMMGDLNQWNT 163 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 E ++ + H SF D I+ S + Sbjct: 164 EGGCLAHFAEDHHVIAPGLSFHSQMPFVSF----------------DRIITS--LDIHVD 205 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263 +A + + R SDH PV L + Sbjct: 206 AAAVHSSERARL-ASDHLPVWADLSL 230 >gi|187927447|ref|YP_001897934.1| endonuclease/exonuclease/phosphatase [Ralstonia pickettii 12J] gi|309779851|ref|ZP_07674606.1| endonuclease/exonuclease/phosphatase [Ralstonia sp. 5_7_47FAA] gi|187724337|gb|ACD25502.1| Endonuclease/exonuclease/phosphatase [Ralstonia pickettii 12J] gi|308921428|gb|EFP67070.1| endonuclease/exonuclease/phosphatase [Ralstonia sp. 5_7_47FAA] Length = 248 Score = 57.1 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 37/276 (13%), Positives = 84/276 (30%), Gaps = 46/276 (16%) Query: 1 MSVVTVATWNVN----SI--RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 M + VAT+N++ I R R+H++ + + DI+ LQE + + L N Sbjct: 1 MLRLRVATYNIHKGVTGIARRVRVHDVRQGLHSMDADIVFLQEVQDRNDRLVAAELFDPN 60 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 Y + Y + + + + ++ L I + Sbjct: 61 Y--------TQLRYLATDVYPHTVYGRNAVYEHGHHGNAILSRFPILLSENLDISDHRFE 112 Query: 115 HGNPITSTKY--DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD---CYNPIIW 169 + + ++ + ++ + + + +++P + W Sbjct: 113 QRGLLHAVTDLGFGEVHLLCAHFGLFARSRQRQAEALVDRVRSVVPPDAPLVVAGDFNDW 172 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 N T+ ++ + T +H + +R+D I + Sbjct: 173 NNRLDRTICQALGATEVADKAANARPVRTFPSHMPW---------------LRLDRIYV- 216 Query: 230 PEATSLLHSARIDTKP----RGWTKPSDHTPVIVSL 261 I+ R W + SDH P++ L Sbjct: 217 -------RGFDIERAHALTGREWAQRSDHVPLLAEL 245 >gi|329961876|ref|ZP_08299890.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides fluxus YIT 12057] gi|328531316|gb|EGF58160.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides fluxus YIT 12057] Length = 662 Score = 57.1 bits (136), Expect = 3e-06, Method: Composition-based stats. Identities = 40/284 (14%), Positives = 72/284 (25%), Gaps = 37/284 (13%) Query: 2 SVVTVATWNVN--SI---RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56 +++ V WN+ I + I+ D++ +QE SL YH Sbjct: 393 NIIKVLQWNIWHGGIHLGNEGQQRVLDLIRSTRADVVMMQE----AYGIQRMLADSLGYH 448 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 ++T N + + LR Sbjct: 449 LKT-HSLKDNLAMYSRFPLETIAWREPFKSNPAKITLPNGKRVMLIDCWLRYAYRPEYTS 507 Query: 117 NPITSTKYDDKI----------SWIKRFLRFASQRLELEEPLIFAGDYN-IIPQPHDCYN 165 + + LE P+I GD+N Sbjct: 508 GYAEKGLDPSVWIAEDSILALPDIQNIYTKDIVPNLETGMPVIITGDFNSCSHLDWTERA 567 Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG----I 221 + + + + +Q GF D+ R + Y + + G Sbjct: 568 KPLHQG---YGPVNFPVSRYMQENGFKDSFREKNPDEV-----TYQGGTVAAIYGQMQMS 619 Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTK--PSDHTPVIVSLDI 263 RID I + S++I SDH V+ ++ Sbjct: 620 RIDFIYYKGKL--KALSSKIVRTAPEIDYVWASDHAAVLTVFEV 661 >gi|225431681|ref|XP_002264011.1| PREDICTED: similar to glucose-inhibited division A family protein [Vitis vinifera] Length = 490 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 20/38 (52%), Gaps = 2/38 (5%) Query: 4 VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETK 39 + + WN + +R + +++ PDI+ +QETK Sbjct: 1 MKIINWNTRGLGSRKKRRVVKEFLRSEKPDIVMIQETK 38 >gi|194223065|ref|XP_001497667.2| PREDICTED: similar to TRAF and TNF receptor-associated protein, partial [Equus caballus] Length = 333 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 45/285 (15%), Positives = 80/285 (28%), Gaps = 59/285 (20%) Query: 2 SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 S+ + TWN++ + RA + +++ +PD+I LQE P Sbjct: 83 SMFSFITWNIDGLDPNNLQERA--QGVCSYLALYSPDVIFLQEV------IPP------- 127 Query: 55 YHIETCGQKSYNGVAIL-SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 Y+ + S + + I+ Q + L + Sbjct: 128 YYSYLKKKASSYEIITGNEEGYFTAIMLKKSRVKFKSQEIIPFPDTKMMRNLLCVHVSVS 187 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + + ++ + K + L+ Q II+ D Sbjct: 188 GNELFLMTSHLESTRGHAKERINQLKMVLK-------------KIQEAPESATIIFAGDT 234 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG------IRIDHIM 227 + L N H Y+ WD +S N G +R D I Sbjct: 235 NLRDQEVTKCGGLPNNILDVWEFLGKPKHCQYT-WDTQMNS---NLGIPATCKLRFDRIF 290 Query: 228 LSPEATSLLHSARIDT---KPRGWTK------PSDHTPVIVSLDI 263 + I G K PSDH ++ +LD+ Sbjct: 291 ----FRAAAGDGHIIPRSLDLLGLEKLDCGRFPSDHWGLLCNLDV 331 >gi|154493449|ref|ZP_02032769.1| hypothetical protein PARMER_02788 [Parabacteroides merdae ATCC 43184] gi|154086659|gb|EDN85704.1| hypothetical protein PARMER_02788 [Parabacteroides merdae ATCC 43184] Length = 292 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 37/269 (13%), Positives = 73/269 (27%), Gaps = 25/269 (9%) Query: 2 SVVTVATWNV------NSIRA---RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52 S + VAT+N+ + + A R + I+ ++ DI QE K+ + Sbjct: 34 SELNVATFNLRMDTEKDGVNAWPNRKEMVKGLIRFHDFDIFGTQE---GFKHMLDGVAEL 90 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 Y G+ S L + N Sbjct: 91 DGYAYIGAGRDDGEDAGEHSAIFYKTSRFDLLDKGNFWFSE--TPDVPGKGWDATCCNRI 148 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 G + + L+ A I + + Sbjct: 149 CSWGKFRDKESGKVFYFFNSHYDHQGKVARRESSKLLIARIKQIAGTDATVFATGDFNAV 208 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI--RIDHIMLSP 230 V + L + + + + T Y +S+ + + RID+I ++ Sbjct: 209 PTDEPMVTLASDGLLLDSYDLSEQPRYGTEGTY-------NSFKTDSEMMNRIDYIWVTK 261 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIV 259 + + + + PSDH PV++ Sbjct: 262 G--TKVKKYAVLNDMQYGRFPSDHFPVMI 288 >gi|147798966|emb|CAN68165.1| hypothetical protein VITISV_008538 [Vitis vinifera] Length = 1765 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 31/258 (12%), Positives = 73/258 (28%), Gaps = 31/258 (12%) Query: 5 TVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WN + +R + +++ PDI+ +QETK + Sbjct: 113 KIISWNTRGLGSRKKRRVVKDFLRSEKPDIVMIQETK----------------------K 150 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 + + S + + + + + Sbjct: 151 AECDRRFVGSVWTARNKEWAVLPACGASGGILVIWDSKKLHSEEVVLGSFSVSVKFAVDG 210 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 JS + A ++ E G + +N I ++ + S Sbjct: 211 SEQFWJSAVYGPNSTALRKDFWVELSDIFGLSSPCWCVGGDFNVIRRCSEKLGGGRLTPS 270 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 + L + + + +++ + K R+D + S E L + + Sbjct: 271 MKDLDDFIRENELIDPPLRSASFTWSNMQEHPVCK----RLDRFLYSNEWEQLFPQSLQE 326 Query: 243 TKPRGWTKPSDHTPVIVS 260 PR SDH P+++ Sbjct: 327 VLPR---WTSDHWPIVLE 341 >gi|113868345|ref|YP_726834.1| metal-dependent hydrolase [Ralstonia eutropha H16] gi|113527121|emb|CAJ93466.1| Metal-dependent hydrolase [Ralstonia eutropha H16] Length = 284 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 42/302 (13%), Positives = 86/302 (28%), Gaps = 60/302 (19%) Query: 4 VTVATWNVNSIRARIHNL-----AAWIKE-NNPDIICLQET-------KTE--DKNFPFE 48 + + +WN+ R ++ ++ + D+ICLQE + + Sbjct: 1 MELISWNIQWGRGADGHVDLGRQVDTLRGIADADVICLQEVTRGFGELRGSPGEDQVTEL 60 Query: 49 TLQSLNYHIETCG---------QKSYNGVAILSKYQPIEIVTHLPGDDLD-----VQARF 94 T YH+ + G I ++ E+ H D + Sbjct: 61 TALLPGYHLLYAPGVDRRTATGGRKQFGNLIATRLPVREVFRHALPWPADPQVASMPRVA 120 Query: 95 IEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLI----- 149 +EA+ ++T+ LR+ +L + + + + ++R E Sbjct: 121 LEASVEVSTRRLRVICTHLEYYSSHQRAAQAEALRTWHAEACDHARRPGRSEKWPGPFTP 180 Query: 150 --------FAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT 201 GD+N P + +DA Sbjct: 181 EPRPAEAVLCGDFNSKPDDIAYRRVLEPFDDAT-PPWRDAWLHTHPGQPHAPTCALYDKE 239 Query: 202 HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 W + D + ++ + +D T SDH P+++SL Sbjct: 240 Q-----WPEPPFA--------CDFMFVTENLAGRIRRCEVDAD----TASSDHQPILLSL 282 Query: 262 DI 263 D+ Sbjct: 283 DL 284 >gi|147790107|emb|CAN61039.1| hypothetical protein VITISV_018673 [Vitis vinifera] Length = 1941 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 37/246 (15%), Positives = 77/246 (31%), Gaps = 28/246 (11%) Query: 15 RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKY 74 R + + A I+ D+ CLQETK +D ++ Sbjct: 1118 RVKRKVIKALIRSQRADLACLQETKIQD-------------------MSRRIVHSLGVGK 1158 Query: 75 QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRF 134 G V + + + + ++ N + + Sbjct: 1159 FLGWGAMSARGAAGGVVVFWDNRVLELVGMEVSLFSILCCFKNCEDGFLWTFTGVYGPTM 1218 Query: 135 LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDA 194 R+ L EE G + +N + + N+ + +S ++ + A Sbjct: 1219 KRYRE--LFWEELGAIRGLWPDPWCIGGDFNVVRFPNERSRERRLTESMRRFFEVIEELA 1276 Query: 195 IRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDH 254 +R L++ W + S+ R+D ++S + + A + PR SDH Sbjct: 1277 LRDLPLHGGLFT-WSGGMNGLSR---SRLDCFLISEDWENHFSGAIQCSLPR---PVSDH 1329 Query: 255 TPVIVS 260 P+++ Sbjct: 1330 FPILLD 1335 >gi|134295849|ref|YP_001119584.1| endonuclease/exonuclease/phosphatase [Burkholderia vietnamiensis G4] gi|134139006|gb|ABO54749.1| Endonuclease/exonuclease/phosphatase [Burkholderia vietnamiensis G4] Length = 284 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 42/302 (13%), Positives = 79/302 (26%), Gaps = 61/302 (20%) Query: 4 VTVATWNV------NSI----R--ARIHNLAAWIKENNPDIICLQE-TKT--------ED 42 + + WN+ + + R A L + D++CLQE T+ Sbjct: 1 MRLIDWNIQWGRDADGVVDLPRTVAAARRLGDF------DVLCLQEVTRGFGALPGGPGP 54 Query: 43 KNFPFETLQSLNYHI-----------ETCGQKSYNGVAILSKYQPIEIVTHLPGDD---- 87 F Y I E + G AI ++ ++ L Sbjct: 55 DQFAELAALLPGYTIVDAIGADLPALEPGAPRRQFGNAIATRLPVGRVLRQLLPWPADAD 114 Query: 88 -LDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEE 146 + +E + +R+ +L + D + R + E Sbjct: 115 APSMPRVALEVELLAPSGPVRVVTTHLEFYSARQRLAQVDALRARHREACAHADHPAPAE 174 Query: 147 PLIFAGDYNIIPQPHDCYNPIIWENDA----CFTLEVRQSFQKLQNMGFTDAIRATHDTH 202 P+ D+ + + + R T Sbjct: 175 NATGPFSATAQPRDAIVCGDFNSAFDSDAYRRMLEPIADAPSFVDAWVARHPGRTPPPTA 234 Query: 203 HLY-S-FWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 +Y + W + D + ++ + ID R SDH PV++ Sbjct: 235 GVYDTVQWSDGPLA--------CDFVFVTETLLPRVTRCEIDGDVR----ASDHQPVVLE 282 Query: 261 LD 262 LD Sbjct: 283 LD 284 >gi|228937659|ref|ZP_04100296.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228970548|ref|ZP_04131198.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228977118|ref|ZP_04137519.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis Bt407] gi|228782566|gb|EEM30743.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis Bt407] gi|228789135|gb|EEM37064.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228822033|gb|EEM68024.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326938155|gb|AEA14051.1| exodeoxyribonuclease III [Bacillus thuringiensis serovar chinensis CT-43] Length = 263 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 37/271 (13%), Positives = 65/271 (23%), Gaps = 19/271 (7%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET--KTEDKNFP----FETLQS 52 + + T N +S + +I LA I+E D+I LQE + +N + Sbjct: 1 MKLLTLNCHSWQEENQIEKIKYLAKVIQEEEYDVIALQEVSQSIQAENVCGNKKEDNFGL 60 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 L + + ++ + F + Sbjct: 61 LLLEELKALHVKDYNITWDFSHIGYDVYEEGLAIITKHNIIKEDTFFISENEDTTYWKTR 120 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 I D + + G + + Sbjct: 121 KIVSTTIAYNGKDITFYSCHLGWWNDEEESFKGQINRLMGRVDSNKLAFLMGDFNNNARL 180 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 E G + WD +RID I+ + Sbjct: 181 EGEGYEYMMQKGLYDTYGLAIEKDEGTTVQGEIAGWD------ENKHNLRIDLILCNQS- 233 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +HS+++ SDH V V LDI Sbjct: 234 -KKVHSSKVIFNGTNRNVISDHFGVEVQLDI 263 >gi|159045260|ref|YP_001534054.1| putative endonuclease/exonuclease/phosphatase [Dinoroseobacter shibae DFL 12] gi|157913020|gb|ABV94453.1| putative endonuclease/exonuclease/phosphatase [Dinoroseobacter shibae DFL 12] Length = 375 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 21/75 (28%) Query: 207 FWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA-RIDTKPR---------------GWTK 250 + YYA SK + +D+++ SP + + S I GW + Sbjct: 304 WTHYYAGGRSKTQ---LDYVIASPALAARVRSTPEIIRTGMPQRVPNLDTPRYPRIGWDR 360 Query: 251 P--SDHTPVIVSLDI 263 P SDH PV+V DI Sbjct: 361 PKASDHCPVVVEFDI 375 >gi|108864082|gb|ABA91837.2| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 1301 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 34/267 (12%), Positives = 66/267 (24%), Gaps = 46/267 (17%) Query: 4 VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + WN + + L KE++PDI+ L TK + Sbjct: 425 MKIIAWNCRGLGNGPTVRGLLNLQKEDDPDILFLSNTKMDTNKL---------------- 468 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 Q +P + + + + + Sbjct: 469 -------------QCFRWKLGMPNLVVKDCQGKSGGLAVFWKKEINLRLRTVSRLFMDVD 515 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 DD W + + + + N E + E Sbjct: 516 VMEDDGFWWRFTGVYGEPRSDKKDLTWKALRTLNATKGELWLCVGDFNEVLFSWEKERGH 575 Query: 182 SFQKLQNMGFTDAIRAT-----HDTHHLYSF---WDYYADSWSKNKGIRIDHIMLSPEAT 233 + + F + T +++ W + R+D + + Sbjct: 576 AKAQSCMDRFRQTLDCCSLSNLGFTGDPFTWRNNWCVRDGYIRE----RLDRAVADSDWC 631 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVS 260 S R+ G + SDH PVIV+ Sbjct: 632 CRFPSFRVRK---GDPRHSDHHPVIVT 655 >gi|255011809|ref|ZP_05283935.1| hypothetical protein Bfra3_21905 [Bacteroides fragilis 3_1_12] gi|313149648|ref|ZP_07811841.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] gi|313138415|gb|EFR55775.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] Length = 678 Score = 56.7 bits (135), Expect = 3e-06, Method: Composition-based stats. Identities = 36/281 (12%), Positives = 67/281 (23%), Gaps = 31/281 (11%) Query: 2 SVVTVATWNVN--SI---RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56 ++V V WN+ I + I+ + D++ +QE SL YH Sbjct: 409 NIVKVLQWNIWHGGIHLGNEGQQRVFDLIRSTHADVVMMQE----AYGIQQMLADSLGYH 464 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 ++T N + + LR Sbjct: 465 LKT-HSLKDNLAMYSRFPLEPIAWREPFKSNPAKITLPNGKRIMLVDCWLRYAYRPEYTS 523 Query: 117 NPITSTKYDDKISW--------IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168 R + E + + H + Sbjct: 524 GYAEKGLDPSVWVAEDSILALPDIRNIYTKDIVPNQETDMPVIITGDFNSCSHLDWTERA 583 Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG----IRID 224 + + + + GF D+ R + Y + + G RID Sbjct: 584 KPLHHGYGPVAFPASRYMLENGFKDSFREKNPDEVAY-----QGGTVAAIYGQMQMSRID 638 Query: 225 HIMLSPEATSLLHSARIDTKPRGWTK--PSDHTPVIVSLDI 263 I + S++I SDH V+ ++ Sbjct: 639 FIYYKGGL--KVLSSKIVRTAPEIDYVWASDHAAVLTVFEV 677 >gi|282164884|ref|YP_003357269.1| hypothetical protein MCP_2214 [Methanocella paludicola SANAE] gi|282157198|dbj|BAI62286.1| conserved hypothetical protein [Methanocella paludicola SANAE] Length = 263 Score = 56.7 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 39/262 (14%), Positives = 79/262 (30%), Gaps = 23/262 (8%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETCGQKSYNGVAILSKY 74 RIH+ + I+E +PDII QE + E L + + I++ Y+ + Sbjct: 7 RIHDQVSAIRELSPDIIAFQEVTALTLSKYIEELSKIGFTHFIDSFQFVKYSSRLKGPRR 66 Query: 75 QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRF 134 + + P + + ++ H + + +D I Sbjct: 67 YGELVASRWPIMEFPGFLKVPWQEKVLSCLIESPEGTIELHTAHVPNGSTNDWIKIRTLE 126 Query: 135 LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW--ENDACFTLEVRQSFQKLQNMGFT 192 + + I GD+N + I W A + + + K + G Sbjct: 127 GIYKGLACQSHNHRILCGDFNTPQKELPDGKIITWGQYEKANGDYALCKYWGKRWDKGER 186 Query: 193 DAIRATHDTH-------------HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + + +S++ + DH+ S + Sbjct: 187 NVLEGLAQFDLADVYRKLNGYVTRDFSWYTKRRGKRIGRR---FDHVFASSSL--KVKEC 241 Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261 R + R SDH+P+ V+ Sbjct: 242 RYLHELR-RKGLSDHSPIEVTF 262 >gi|299141468|ref|ZP_07034604.1| endonuclease/exonuclease/phosphatase family protein [Prevotella oris C735] gi|298576804|gb|EFI48674.1| endonuclease/exonuclease/phosphatase family protein [Prevotella oris C735] Length = 299 Score = 56.7 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 45/271 (16%), Positives = 81/271 (29%), Gaps = 33/271 (12%) Query: 8 TWNV-----------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY- 55 ++N+ NS + R +L +I P I QE + + + L + Y Sbjct: 42 SYNIRYNVSDDIAEGNSWKQRCPHLCDFINFEQPVIFGAQEVLADQLHDLLQGLDNYGYI 101 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + K A + + + + L + + + Sbjct: 102 GVGREDGKEAGEYAAIFYKKDLLKLLDSGYFWLSETPEKPSTGWDAACIRICTWGKFQDK 161 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + T ++ + + R S RL ++ G + I N + Sbjct: 162 ASKKTFYFFNTHMDHVGAVARRESARLIIQRMKELTGGKHTILTGDFNANQT--DESYKM 219 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATS 234 E N A ++ DY D G+ RIDHI ++ + Sbjct: 220 FSESGFLHDCYVNAHQRMAPAG--------TWNDYMQDC----PGMARIDHIFVTKDFD- 266 Query: 235 LLHSARIDTKPRGWTKP----SDHTPVIVSL 261 ++ I T K SDH PV+V L Sbjct: 267 -INHYGIFTNSYWLGKTRRNISDHYPVMVKL 296 >gi|255039474|ref|YP_003090095.1| Endonuclease/exonuclease/phosphatase [Dyadobacter fermentans DSM 18053] gi|254952230|gb|ACT96930.1| Endonuclease/exonuclease/phosphatase [Dyadobacter fermentans DSM 18053] Length = 233 Score = 56.7 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 32/273 (11%), Positives = 85/273 (31%), Gaps = 56/273 (20%) Query: 4 VTVATWNV-NSIR----ARIHNLAAWIKENNPDIICLQET-------KTEDK--NFPFET 49 + + ++N+ + + + + ++ IKEN+PD++ LQ K + + +T Sbjct: 1 MKLMSFNIRHGLNNQEESNLRDILRIIKENDPDLVALQAVDSLVDKGKVQFQLRQIAAQT 60 Query: 50 LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 +Y + G+ ILS + + + ++ ++++ Sbjct: 61 GMYYSYAVADTNDNGTQGLGILSNWPMEKTQVIHLPKTPGADPKVLQCGLIKLSRSVTFR 120 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 +Y + + + +P++ D P ++ Sbjct: 121 FCNSRL-------EYASVMDRALQAAYINQMLVNSVQPVLLGMDMGARPNEQPYFSFRRN 173 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 DA +++ + L G R+D+I Sbjct: 174 WQDAARGSQMQTWNEGLP--------------------------------GDRLDYIFAL 201 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + + ++ R + SDH P+ +++ Sbjct: 202 LNNKVRIKNYKV---IRNYPDVSDHYPIQATIE 231 >gi|116695510|ref|YP_841086.1| metal-dependent hydrolase [Ralstonia eutropha H16] gi|113530009|emb|CAJ96356.1| Metal-dependent hydrolase [Ralstonia eutropha H16] Length = 243 Score = 56.7 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 39/273 (14%), Positives = 70/273 (25%), Gaps = 47/273 (17%) Query: 4 VTVATWNVNSIRA-------RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56 +TV ++N++ RA R +A ++E + DI+ LQE Sbjct: 1 MTVVSYNIH--RAVGTDRRYRPDRIATVLEELDADIVALQEV-----------------E 41 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT-FTINTQTLRIGNLYLPH 115 + + +A + + T + G+ A +N L + Sbjct: 42 SGSSNDHTLEYLAGHTGMHVVSGFTRVRGNADYGNALLARFAPQAVNQIDLTVKGCEPRG 101 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 +T R + E N + Sbjct: 102 AIDVTLACTASGWESALRVIATHLGLRPGERRRQVQQLLNYVAAAPPLP-------TILL 154 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 T S W +A +D I +SP + Sbjct: 155 GDVNEWFLWGRPLRWLHAYFEHAPHTATFPSRWPVFA----------LDRIWVSPR--AH 202 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268 L S P SDH P++ ++P + Sbjct: 203 LVSVASHRSPLARV-ASDHLPLLARFEVPAAPQ 234 >gi|327189443|gb|EGE56605.1| putative metal-dependent hydrolase protein [Rhizobium etli CNPAF512] Length = 239 Score = 56.7 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 38/269 (14%), Positives = 75/269 (27%), Gaps = 49/269 (18%) Query: 4 VTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS------ 52 + + T+NV+S + +A+ I E DI+ LQE + L + Sbjct: 6 IKLLTYNVHSCIGNDRKLDPGRIASVIAEAGADIVALQEVRRRTGGIDQAYLIASLLKMQ 65 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 ++H + G AI++ + + + + + L + Sbjct: 66 AHFHPALSVAEEQYGDAIITALPTSAVKAGPLPSIGEQRGALSVEVLVGDRKLLVVNTHL 125 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 G + + +E P + GD+N IP D Sbjct: 126 GLRGRER------IRQMTTLLNSGWLRGAMEEPLPCVLCGDFNAIPSSATYRLVARSLKD 179 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 A + + +R+DHI ++ + Sbjct: 180 AQLGGTAAP----------RATFPSRYPL-------------------MRLDHIFVTDDL 210 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + A + R SDH P+ + Sbjct: 211 V--VKRAAVLQN-RLTKVASDHLPLFAEI 236 >gi|321468777|gb|EFX79760.1| hypothetical protein DAPPUDRAFT_3216 [Daphnia pulex] Length = 288 Score = 56.7 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 40/264 (15%), Positives = 67/264 (25%), Gaps = 23/264 (8%) Query: 15 RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETCGQKSYNGVAILS 72 R R + + I E NPDIICLQE + F L+S Y + + Sbjct: 31 RTRRYRIVEEIVEYNPDIICLQEV--DHYQFLSRALRSQGYEGIYFPKPDSPCIYIKGNN 88 Query: 73 KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIK 132 I +L I + + + + I + + + +K Sbjct: 89 GPDGCAIFYRANDYELIKVETRIVEVWRVQSNQVVILTMLRHKASGREICV---ATTHLK 145 Query: 133 RFLRFASQRLELEEPLIFAGDYN------IIPQPHDCYNPIIWENDACFTLEVRQSFQKL 186 L E+ P T+ F Sbjct: 146 ARQGALLSTLRNEQGKDILDFLQNNVDVADCPIIMAGDFNAEPTEPVYSTIRSDSRFGFD 205 Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE------ATSLLHSAR 240 Y+ W + S + ID++ S + Sbjct: 206 SAYRCDVDGAEEAGQEPPYTTWKVRGEGESCHT---IDYVFFSRRQLGVNQVLPFPTGEQ 262 Query: 241 IDTK-PRGWTKPSDHTPVIVSLDI 263 I + PSDH ++V D+ Sbjct: 263 IGPDRVPSFQYPSDHFSLVVDFDL 286 >gi|239627663|ref|ZP_04670694.1| exodeoxyribonuclease III [Clostridiales bacterium 1_7_47_FAA] gi|239517809|gb|EEQ57675.1| exodeoxyribonuclease III [Clostridiales bacterium 1_7_47FAA] Length = 311 Score = 56.7 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 44/309 (14%), Positives = 77/309 (24%), Gaps = 54/309 (17%) Query: 4 VTVATWNVNSIR-----ARIHNLAAWIKENNPDIICLQETKTEDKNF----PFETLQSLN 54 + + T N +S+ A++H A + PDII LQE + L+ Sbjct: 1 MKLMTLNTHSLEEENYEAKLHAFAEGVCRAEPDIIALQEV--NQTQIAAPVDKKDLELYG 58 Query: 55 Y-HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 Y C + + + D+ +A I A IG Sbjct: 59 YVPCAPCTPYAPHAQCASVSQCSVHPSPIPRTDNHAYRAARICAEHGRPYHWTWIGAKTG 118 Query: 114 PHGNPITSTKYDDKISWIKRFLRFA--SQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 + + I Y + Sbjct: 119 YGKYDEGLAILSRIPIAETKQFYITASQDYANWKTRKILGIGIAAEHGMEYFYTVHMGWW 178 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATH--------------------DTHHLYSFWDYY 211 Q + + +G + D + + D Y Sbjct: 179 KDEDEPFEGQWERIRRELGDGACLETYPGPVWLMGDFNSPAHVRGEGRDLIRGFGWLDSY 238 Query: 212 ADSWSKN------------------KGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253 + SK+ G+RID+I S + + S+R+ SD Sbjct: 239 ELAGSKDSGITVGHAIDGWREQGDVSGMRIDYIWTSRKVP--VRSSRVIFNGSYEPIVSD 296 Query: 254 HTPVIVSLD 262 H +IV + Sbjct: 297 HYGIIVEYE 305 >gi|308808326|ref|XP_003081473.1| Apurinic/apyrimidinic endonuclease and related enzymes (ISS) [Ostreococcus tauri] gi|116059936|emb|CAL55995.1| Apurinic/apyrimidinic endonuclease and related enzymes (ISS) [Ostreococcus tauri] Length = 447 Score = 56.7 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 24/186 (12%), Positives = 56/186 (30%), Gaps = 18/186 (9%) Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165 + + +G + + + + ++ +I+ GD N + D Sbjct: 242 IVLNTYVPHNGGNPERWEKRAMWDFRVKRF---LTHYKGKKDVIWLGDLNCAHRDLDVAP 298 Query: 166 PIIWENDA--CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223 E ++ L DA RA H +++ +R+ Sbjct: 299 SPEQFIGVGGFTVPERQRFTDILSTSDMVDAYRALHGDRQTFTW---RGIGMGSGLAMRL 355 Query: 224 DHIMLSPEATSLLHSARI----DTKPRGWTKP------SDHTPVIVSLDIPEPRKKQQDS 273 D+ ++ L S +P SDH + ++L + ++ S Sbjct: 356 DYFIVPRTFVHRLKSCETSTDRFDDAVARERPISCFFGSDHCALYLTLHKRDASDAEKPS 415 Query: 274 TSQNMK 279 ++ +K Sbjct: 416 ETKAVK 421 >gi|260462207|ref|ZP_05810451.1| Endonuclease/exonuclease/phosphatase [Mesorhizobium opportunistum WSM2075] gi|259032067|gb|EEW33334.1| Endonuclease/exonuclease/phosphatase [Mesorhizobium opportunistum WSM2075] Length = 371 Score = 56.7 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 46/310 (14%), Positives = 83/310 (26%), Gaps = 77/310 (24%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHI--------------------------- 57 I D+IC+QE N Y Sbjct: 66 IAATRADVICMQEV----DNIEALKAFEYGYLFKMVGQGYRQKYTTSGNDSRGIDVAIMM 121 Query: 58 --ETCGQKSYNGVAILSKYQPIEIVTHLPGDDL----------DVQARFIEATFTINTQT 105 ET + V + S L +L + +E T+ Sbjct: 122 RNETAQGQPIEFVRMTSYAHVTYEQFGLYTPELAALGNQANERVFRRDCLEIDITVGGVP 181 Query: 106 LRIGNLYLPHGNPI----------TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYN 155 L + ++ + + + + + ++ GD N Sbjct: 182 LTLYLVHFKSMGSPRNGLDGREATMPVRIAEAQAVRRIIEQRFGVDHAADKRWAICGDMN 241 Query: 156 IIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW 215 Q E + L GF++ I + ++F Y+ Sbjct: 242 DYRQRVKIAGDEFDGYRFEVVDEAQSCIDVLTAGGFSENIVERRPEMNRWTF--YHTRGP 299 Query: 216 SKNKGIRIDHIMLSPEATSLLHSA-------------------RIDTKPR-GWTKP--SD 253 + ++D+I+LS + +A ++ PR GW +P SD Sbjct: 300 EERHLCQLDYILLSKGLAAKNATAVPDIIRNGQPWRTIFPAGQEVERFPRAGWDRPKASD 359 Query: 254 HTPVIVSLDI 263 H PV ++LDI Sbjct: 360 HCPVAITLDI 369 >gi|258647674|ref|ZP_05735143.1| AP endonuclease domain protein [Prevotella tannerae ATCC 51259] gi|260852503|gb|EEX72372.1| AP endonuclease domain protein [Prevotella tannerae ATCC 51259] Length = 359 Score = 56.7 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 37/247 (14%), Positives = 68/247 (27%), Gaps = 16/247 (6%) Query: 19 HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIE 78 +N+A +++ DI CLQE + D + + H + +NGV I Sbjct: 122 NNVALYLELQKADIACLQEVPSFDGYYEQHVFPVMK-HAKYHDGILFNGVFIAMFSHYPI 180 Query: 79 IVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFA 138 + L D + L I N G + ++ Sbjct: 181 VRHELICQDEGNGSVAFWTVRAPGDTILVINNHLKSIGLSRQDREEFKEMVHAPESKISR 240 Query: 139 SQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT 198 + + A + + + + Sbjct: 241 QGSKTILSKITHAAAARAAMADKVAAFIDRHRGT--PMIVCGDFNDTSISYAYRRVGKDL 298 Query: 199 HDTHHLYSFWDYYADSWSKNKG---IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHT 255 D + S N+ +RID + S E T A +D++ K SDH Sbjct: 299 TDAYVS----TGRGFGRSFNRDAIFVRIDQMFCSEEFTPYA--AYVDSRI----KCSDHY 348 Query: 256 PVIVSLD 262 P++ + Sbjct: 349 PIVAYFE 355 >gi|194035181|ref|XP_001925325.1| PREDICTED: sphingomyelin phosphodiesterase 2 [Sus scrofa] gi|311244316|ref|XP_003121404.1| PREDICTED: sphingomyelin phosphodiesterase 2-like [Sus scrofa] Length = 423 Score = 56.7 bits (135), Expect = 4e-06, Method: Composition-based stats. Identities = 42/297 (14%), Positives = 86/297 (28%), Gaps = 37/297 (12%) Query: 4 VTVATWNVNSI------RA-RIHNLAAWIKENNPDIICLQETKTEDK--NFPFETLQSLN 54 + + N I RA R+ L ++ + D++ L+E +E + L + Sbjct: 9 LKIFNLNCWGIPFLSKHRADRVKRLGDFLNMESFDLVLLEEVWSEQDFQYLRQKLLPTYP 68 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN---- 110 +G+ + SK+ E H+ + F L + + Sbjct: 69 AAHYFRSGIIGSGLCVFSKHPIQEFTQHVFTLNGYPYMVHHGDWFCGKAVGLLVLHLSGL 128 Query: 111 -------LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 + +++ +F + + ++ GD N+ P+ C Sbjct: 129 VLNAYVTHLHAEYSRQKDIYLAHRVAQAWELAQFIHHTSKKADVVLLCGDLNLHPKDLGC 188 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223 W LE R + + GIRI Sbjct: 189 RLLKEWTGLHDAFLETRDFKGSEEGCTMVPENCYVNQRELE-----------QFPVGIRI 237 Query: 224 DHIMLSPEATSLLHSARIDT-----KPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTS 275 D+++ + L S + P T SDH ++ +L + + S + Sbjct: 238 DYVLY-KAVSGLYISCKTLKTTTGSDPHSGTPLSDHEALMATLCVRHSPPQHNPSPT 293 >gi|223984111|ref|ZP_03634263.1| hypothetical protein HOLDEFILI_01555 [Holdemania filiformis DSM 12042] gi|223963905|gb|EEF68265.1| hypothetical protein HOLDEFILI_01555 [Holdemania filiformis DSM 12042] Length = 276 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 41/272 (15%), Positives = 80/272 (29%), Gaps = 22/272 (8%) Query: 1 MSVVTVATWNV---------NSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFET 49 M+ + V T+N+ N +R R + I +PDII +QE + + Sbjct: 8 MTCLKVMTFNLKNDMFFTRKN-LRWDTRRQYVRNLIASTSPDIIGVQEL---SDSMREQL 63 Query: 50 LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 L + ++ + + + + + + I Sbjct: 64 QALLPQYQFVGQARNRRRQFMHEHSDILFLKDRFELLEEKTFWLSKQPEEAGSRTWTSIF 123 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 + + +E I + + P+I Sbjct: 124 PRICTMAQLKDRETEQVFRVFNTHLDHLLAYTRTVEIRTII---REMQRLQQEKACPLIL 180 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 D T+ ++ ++ +D+ ++ Y K + ID+I +S Sbjct: 181 MGDLNTTMSSPSLQLLIKPENR-LNLKPVYDSSAAFNTLHY-GKGRLKEDRLPIDYIYVS 238 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + + S RI T PSDH PVI L Sbjct: 239 EDYD--VRSTRIITTCFNGLYPSDHYPVICHL 268 >gi|254494845|ref|ZP_01051882.2| endonuclease/exonuclease/phosphatase family protein [Polaribacter sp. MED152] gi|213690427|gb|EAQ41310.2| endonuclease/exonuclease/phosphatase family protein [Polaribacter sp. MED152] Length = 333 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 48/273 (17%), Positives = 86/273 (31%), Gaps = 44/273 (16%) Query: 2 SVVTVATWNV---N--------SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETL 50 S + + ++NV N I + ++ ++ PDI+ LQE F Sbjct: 94 SDLKIMSYNVRMFNHWQWIEEEGI---PNKISEFVSAKEPDILLLQE-------FHNSDN 143 Query: 51 QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 S NY + K+ N L+ Y +I+ + D I A T+RI N Sbjct: 144 PSFNYPYKYIKLKNTNSNIGLAIYSNYKIINKGSLELTDTSNNIIFADVLKGKDTIRIYN 203 Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170 L+L + ++ + RL + + I Sbjct: 204 LHLQSLELN-----AEAENFGQENSEKLLARLRAGFKKQAEQTEEFLLHEANWKGKKIVS 258 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230 D + ++ N I A Y++ ++ +RID I+ Sbjct: 259 GD-FNNTAYSWVYNQISNNKKDAYIEAGKGFGKTYNY------AFP----LRIDFILTDE 307 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +A I+ K SDH P+ ++ Sbjct: 308 -------NAIINQFTSFNEKNSDHFPIQARINW 333 >gi|288554501|ref|YP_003426436.1| endonuclease/exonuclease/phosphatase [Bacillus pseudofirmus OF4] gi|288545661|gb|ADC49544.1| endonuclease/exonuclease/phosphatase [Bacillus pseudofirmus OF4] Length = 265 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 40/269 (14%), Positives = 72/269 (26%), Gaps = 19/269 (7%) Query: 4 VTVATWNVNSIRAR--------IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55 + + T NV+ A + +L I E D+I LQE E + Sbjct: 3 LKLLTLNVH---AWQEENQEKKLDHLVKTIFEEQYDVIALQEVSQHRDQDVVEGQIKADN 59 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL---RIGNLY 112 + +K + + + + + R + Sbjct: 60 YGYILQKKLKELGSAPYEMVWAPCHYGYEVFEEGIALLTRHPIIESTDFYVTKSREMKNW 119 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 + D+K + E IP + + N Sbjct: 120 KSRNIVGALIEIDNKPIHFYSCHLGWWEDTEEPARGQMDALLEQIPADGRVFLMGDFNNH 179 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 A E + L GF D + + A +GIRID I+ + + Sbjct: 180 ADMRNEG---YDYLIQNGFYDTFTLADEKDSGVTVEGKIAGWDQNKRGIRIDLILTNQKV 236 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + S+++ R SDH V + Sbjct: 237 --NVFSSKVIFNGRNRDIVSDHFGVEAVI 263 >gi|254776497|ref|ZP_05218013.1| endonuclease/exonuclease/phosphatase [Mycobacterium avium subsp. avium ATCC 25291] Length = 254 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 32/270 (11%), Positives = 76/270 (28%), Gaps = 31/270 (11%) Query: 4 VTVATWNV-------NSIRARIHNLAAWIKENNPDIICLQET-----KTEDKNFPFETLQ 51 + VAT+N+ + + + L I+ +PD++ LQE ++E + + Sbjct: 1 MRVATFNILHGRTVGDGV--IVERLRDCIRRLDPDVLSLQEVDCDQPRSEHADLTGAAAE 58 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 ++ + ++ + + + Q LR+ + Sbjct: 59 AMG----AVEHRFVAAISGTPGATWMAATGDEQPGTAAYGIALLSRYPVASWQVLRLPRI 114 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 + + + R A + E + + +P + + + Sbjct: 115 PMRFPMYLPGPNRVMIVDEEPRAAVIAQLGTPIGELTVANTHLSFVPGWNRRQLRRLIRD 174 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 + + +F + N ++DHI+ Sbjct: 175 LRGLPGPRLLTGDLNMTPQTVRRWSGMRALGNAKTFP-------ADNPNRQLDHILTDDR 227 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 L A + SDH P++V L Sbjct: 228 ---RLRCAAVQADLM---PISDHRPLVVDL 251 >gi|67845844|dbj|BAE00011.1| p97Bcnt [Tragulus napu] Length = 341 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 32/263 (12%), Positives = 62/263 (23%), Gaps = 27/263 (10%) Query: 6 VATWNVNSIRARIHNLAAWIKEN----NPDIICLQETKTE-DKNFPFETLQSLNYHIETC 60 + TWNV S+ +K+ N DI+ + E K + H Sbjct: 89 IGTWNVRSMN---PGKLDVVKQEMDRINIDILGISELKWTGMGELNSDD------HYIYY 139 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + ++ + + G +L I Sbjct: 140 CGQQSLRRNGVALIVNKRVQNAIIGCNLKNDRMISLRFQGKPFNLTVIQVFAPTPYAEEG 199 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + + L + IP + + ++ Sbjct: 200 EVYRFYEDLQHLLEITPKIDVLFIIGDWNAKVGSQEIPGITGRFGLGMQNEAGRRLIDFC 259 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 N + LY++ + ID+I+ S + SA+ Sbjct: 260 H-----HNRLVIANTLFQQPSRRLYTWTSPDGRFRDQ-----IDYIICRQRWRSSVQSAK 309 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263 G SDH +I + Sbjct: 310 TRP---GADCGSDHKLLIAKFRL 329 >gi|21241443|ref|NP_641025.1| hypothetical protein XAC0672 [Xanthomonas axonopodis pv. citri str. 306] gi|21106782|gb|AAM35561.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] Length = 287 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 37/274 (13%), Positives = 71/274 (25%), Gaps = 34/274 (12%) Query: 4 VTVATWNVNSIRA------------RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51 + V ++NV R R + A IK+ +PD+ QE +E F E L Sbjct: 34 LRVMSFNV---RVPADTDGDKRWQVRRAAMVALIKQTHPDVFGTQELVSEQAAFLAEQLP 90 Query: 52 SLNYHIETCGQKSYNGVA-ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 + + + + + +E+V D R T+ + Sbjct: 91 DYRWFGQGRRGDDSDEHMGVFYDARVLEVVESGDFWLSDTPERAGSITWGNVLPRMATWA 150 Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170 L+ + ++ + + + +P + Sbjct: 151 LFERRSDKRRFYLFNTHFPYRDEDEPARERSAR-----LILSRIAQLPATIPVVLTGDFN 205 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230 +D + +T ++ RID I+ Sbjct: 206 SDPDKITYPTLTAVLRDARAQASKRSGPENTFQDFTTHPTR----------RIDWILY-R 254 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 G PSDH PV+ + P Sbjct: 255 GLRPS--RFATLDDRPGGILPSDHYPVMAEFEWP 286 >gi|281352756|gb|EFB28340.1| hypothetical protein PANDA_003873 [Ailuropoda melanoleuca] Length = 353 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 47/285 (16%), Positives = 80/285 (28%), Gaps = 59/285 (20%) Query: 2 SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 SV + TWNV+ + RAR + +++ NPD+I LQE P Sbjct: 103 SVFSFITWNVDGLDLNNLQERAR--GVCSYLTLYNPDVIFLQEV------IPP------- 147 Query: 55 YHIETCGQKSYNGVAI-LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 Y + S + + I+ Q + L + Sbjct: 148 YCSYLKKRASSYEIITGHEEGYFTAIMLKKSRVKFKSQEIIPFPNTKMMRNLLCVYASVS 207 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + + ++ + K + L+ Q +I+ D Sbjct: 208 GNELCLMTSHLESTRGHAKERMNQFKTVLK-------------KMQEAPESATVIFAGDT 254 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG------IRIDHIM 227 L + H Y+ WD + N G +R D I Sbjct: 255 NLRDHEVTKCGGLPSNILDVWEFLGKPKHCQYT-WDTQMNC---NLGIAPACKLRFDRIF 310 Query: 228 LSPEATSLLHSARIDT---KPRGWTK------PSDHTPVIVSLDI 263 + S I + G K PSDH ++ +LD+ Sbjct: 311 ----FRTAAESGHIVPQSLELLGLEKLDCGRFPSDHWGLLCNLDV 351 >gi|241113465|ref|YP_002973300.1| Endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240861673|gb|ACS59339.1| Endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 242 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 38/272 (13%), Positives = 74/272 (27%), Gaps = 52/272 (19%) Query: 4 VTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQETKT---------EDKNFPFET 49 + + T+NV+S + +A+ I E DI+ LQE + Sbjct: 6 IKILTYNVHSCIGGDRKLDPGRIASVIAEAEADIVALQEVDVLRRRTGGVDQAHAIASLL 65 Query: 50 LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 ++H + G AI++ + + + N + L + Sbjct: 66 KMQAHFHPALSIAEEQYGDAIITSLPTGAVKAGPLPSIGEQRGAISVEILVGNRKLLVVN 125 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 G + + + P I GD+N IP Sbjct: 126 THLGLRGRER------IRQMTTLLNPGWLRGTTDEPLPTILCGDFNAIPSSATYRLAARS 179 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 DA + + +R+DHI ++ Sbjct: 180 LKDAQLAGSAAP----------RATFPSRYPL-------------------MRLDHIFVT 210 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + + A + + R SDH P++ + Sbjct: 211 DDLI--VKQAAVL-ENRLTRIASDHLPLLAEI 239 >gi|300692524|ref|YP_003753519.1| metal dependent endonuclease/phosphatase [Ralstonia solanacearum PSI07] gi|299079584|emb|CBJ52262.1| putative metal dependent endonuclease/phosphatase [Ralstonia solanacearum PSI07] Length = 248 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 37/276 (13%), Positives = 83/276 (30%), Gaps = 46/276 (16%) Query: 1 MSVVTVATWNVN----SI--RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 M + VAT+N++ I R R+H++ + + DI+ LQE + + L N Sbjct: 1 MLRLRVATYNIHKGVTGIARRVRVHDVRQGLHTMDADIVFLQEVQDRNDRLVAAELFDPN 60 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 Y + Y + D + + ++ L I + Sbjct: 61 Y--------TQLRYLATDVYPHTVYGRNAVYDHGHHGNAIMSRYPILLSENLDISDHRFE 112 Query: 115 HGNPITSTKY--DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD---CYNPIIW 169 + + ++ + ++ + + + +++P + W Sbjct: 113 QRGLLHAVADLGFGEVHLLCAHFGLFARSRQRQAEALIERVRSVVPTDAPLLVAGDFNDW 172 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 N + ++ + T +H + +R+D I + Sbjct: 173 NNRLDRVICQALGATEVADRSAGARPLRTFPSHLPW---------------LRLDRIYV- 216 Query: 230 PEATSLLHSARIDTKP----RGWTKPSDHTPVIVSL 261 I+ R W + SDH P++ L Sbjct: 217 -------RGFDIERAHALTGRDWAQRSDHVPLLADL 245 >gi|300774456|ref|ZP_07084319.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910] gi|300506271|gb|EFK37406.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910] Length = 340 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 48/264 (18%), Positives = 88/264 (33%), Gaps = 46/264 (17%) Query: 4 VTVATWNVN----SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HI 57 + V T+NV + +IK + DII +QE K ++ + ++ + Sbjct: 114 IKVLTFNVKYGEYGW----DKVKDYIKAQDADIILVQE-KDTNRVIKRDLIKYPSVILKT 168 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 + + + ++ + G + + ++E + ++ L L + + Sbjct: 169 KHKIVRQAELIDEKARGNSFYADIDINGKVVRIINVYLEPFRLNKSMFTKLDALGLGNVS 228 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + S + + R P+I AGD+N +P ++ YN DA Sbjct: 229 TLLSHMTPTFQAHEDQVKRIRKMVDLSPYPVILAGDFNSVPNSYEYYNLGKDLQDAFLVA 288 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 + SF DY +RID+I S L Sbjct: 289 GKGSAS----------------------SFHDYKVP-------LRIDYIFSSKSIIPL-- 317 Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261 S ++D K SDH PVI Sbjct: 318 SYKVDQSV----KLSDHYPVIAEF 337 >gi|147791244|emb|CAN67888.1| hypothetical protein VITISV_013606 [Vitis vinifera] Length = 517 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 17/137 (12%), Positives = 38/137 (27%), Gaps = 4/137 (2%) Query: 4 VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTED--KNFPFETLQSLNYHIET 59 + + +WNV ++ + +I+ D+IC+QETK + N + Sbjct: 358 MKILSWNVRGANDSSKRKVIKTFIRNQRVDVICIQETKIQAMSDNIARSIGSGRFLEWKA 417 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 + +G ++ + V + RF + L+ Sbjct: 418 VNAEGASGGILMCWDKRTLEVLDWEEGQFTLSCRFRNVENGAIWIFTGVYXLFSKMEREA 477 Query: 120 TSTKYDDKISWIKRFLR 136 + Sbjct: 478 LWDELGAIRGLWDDPWC 494 >gi|296217531|ref|XP_002755080.1| PREDICTED: 5'-tyrosyl-DNA phosphodiesterase-like [Callithrix jacchus] Length = 362 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 45/285 (15%), Positives = 82/285 (28%), Gaps = 59/285 (20%) Query: 2 SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 S+ ++ TWNV+ + RAR + +++ +PD++ LQE P Sbjct: 112 SMFSLMTWNVDGLDLNNLAERAR--GVCSYLVLYSPDVVFLQEV------IPP------- 156 Query: 55 YHIETCGQKSYNGVAI-LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 Y + + + I+ L Q + + L + Sbjct: 157 YCSYLKKRAKNYEIITGHEEGYFTAIMLKKSRVKLKSQEIIPFPSTNMMRNLLCVHVNVS 216 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + + ++ + K + L+ Q +I+ D Sbjct: 217 GNELCLMTSHLESTKGHAKERMNQLKIVLK-------------KMQEAPESATVIFAGDT 263 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG------IRIDHIM 227 + L + H Y+ WD +S N G +R D I Sbjct: 264 NLRDQEITKCGGLPSNIVDVWELLGKPKHCQYT-WDTQMNS---NLGITAACKLRFDRIF 319 Query: 228 LSPEATSLLHSARIDT---KPRGWTK------PSDHTPVIVSLDI 263 + I G K PSDH ++ +LDI Sbjct: 320 ----FRAAAEEGHIIPRSLDLLGLEKLDCGRFPSDHWGLLCNLDI 360 >gi|329847963|ref|ZP_08262991.1| endonuclease/Exonuclease/phosphatase family protein [Asticcacaulis biprosthecum C19] gi|328843026|gb|EGF92595.1| endonuclease/Exonuclease/phosphatase family protein [Asticcacaulis biprosthecum C19] Length = 278 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 36/278 (12%), Positives = 66/278 (23%), Gaps = 40/278 (14%) Query: 3 VVTVATWNVNSIR-----------ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51 + V ++N IR R LA + +PDI+ +QE + + Q Sbjct: 25 TLRVMSYN---IRYANDADRPNWGERREALAKQVAFTDPDILGVQE--AQPVQVAYLAAQ 79 Query: 52 SLNYHIE----TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107 Y G + + + R Sbjct: 80 WPGYDHYGLGRDDGVNGETTTLFWRRDRFETVSKSHQWCSPTPDRPGKGWDAAWPRTITR 139 Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPL-IFAGDYNIIPQPHDCYNP 166 + G + A Q + + D Sbjct: 140 LVLRDRLSGKVLDVRNTHLDNEGAVARENCAKQVAGIVVESGALVIVLGDMNSGPDSAPY 199 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226 + DA + R++ ++ +D A +G IDHI Sbjct: 200 RVLTGDALGLKDARKA------------ATVDFGPPGTFNGFDLSAT-----QGEAIDHI 242 Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 + + + T SDH PV+ + + Sbjct: 243 FVPRGLA--VTRYGVLTDSFSGKVISDHFPVVADIRVD 278 >gi|260889173|ref|ZP_05900436.1| endonuclease/exonuclease/phosphatase family protein [Leptotrichia hofstadii F0254] gi|260861233|gb|EEX75733.1| endonuclease/exonuclease/phosphatase family protein [Leptotrichia hofstadii F0254] Length = 263 Score = 56.3 bits (134), Expect = 4e-06, Method: Composition-based stats. Identities = 44/273 (16%), Positives = 81/273 (29%), Gaps = 23/273 (8%) Query: 4 VTVATWNVNSIRARIHN--------LAAWIKENNPDIICLQET-KTEDKNFPFETLQSLN 54 + + T NV+ A + LA I E D+I +QE + + F+ ++ N Sbjct: 1 MKLLTINVH---AWLEENQMEKIDILAKDIAEKQYDVIAMQEVNQLMNNPIIFDDIRQEN 57 Query: 55 Y-HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 Y + + Y + I + + + R T ++ Sbjct: 58 YGWVLLEKLQEYTDTDYYYHWSNSHIGFSKYNEGVAIITRHKIKDEDEFYCTFA-QSVRT 116 Query: 114 PHGNPITSTKYDD--KISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 I S D + + N + + Sbjct: 117 ISARRIVSITIDYKGQDIEFYSCHMNLPNCETEDMGENLRNILNRSKTDNLKILMGDFNT 176 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG-IRIDHIMLSP 230 DA E +Q + N G D + D W ++K RID+I + Sbjct: 177 DANGNPED---YQNILNQGLFDTYTLAEKKDSGVT-VDKGIHGWDQDKSQKRIDYIFCNK 232 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 E + +++ + SDH V V ++I Sbjct: 233 EI--KVKESKVIFDGKNKGVVSDHFGVEVEIEI 263 >gi|242051080|ref|XP_002463284.1| hypothetical protein SORBIDRAFT_02g041190 [Sorghum bicolor] gi|241926661|gb|EER99805.1| hypothetical protein SORBIDRAFT_02g041190 [Sorghum bicolor] Length = 451 Score = 56.3 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 45/271 (16%), Positives = 89/271 (32%), Gaps = 17/271 (6%) Query: 15 RARIHNLAAWIKENNPDIICLQETKTEDK---NFPFETLQSLNY-HIETCGQKSYNGVAI 70 R R ++ ++E DII LQ + E++ E + L ++ G A+ Sbjct: 178 RPRRWSVEEVLREAGADIIGLQNVRAEEERGMRPLSELAEGLGMRYVFAESWAPEYGNAV 237 Query: 71 LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISW 130 LS++ H D D + + + +L H + K D I Sbjct: 238 LSRWPIKRWKAHRVADQSDFRNVLRATIEVPDAGEVNFHCTHLDHLDERWRMKQVDAIIR 297 Query: 131 IKRFLRFASQRLEL-EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNM 189 + L + A + I + ++ + + L+ +Q Sbjct: 298 SGDGPHILAGGLNALDGTDYSADRWADIVKYYEEIGKPTPKVEVMQYLKAKQYVDAKDFA 357 Query: 190 GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT 249 G +A+ ++ G R+D+I+ SP ++ Sbjct: 358 GECEAVVVVAKGQNV------QGTCK---YGTRVDYILASPNSSYKFVPGS--YTVVSSK 406 Query: 250 KPSDHTPVIVSLDIPEPRK-KQQDSTSQNMK 279 SDH V V + IP+ R+ + +T+ + Sbjct: 407 GTSDHHIVRVDVAIPQIRETDAETATNGKRR 437 >gi|291302648|ref|YP_003513926.1| endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis DSM 44728] gi|290571868|gb|ADD44833.1| Endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis DSM 44728] Length = 278 Score = 56.3 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 44/287 (15%), Positives = 85/287 (29%), Gaps = 62/287 (21%) Query: 2 SVVTVATWNVN-SIRARIHNLAAW------IKENNPDIICLQET------KTEDKNFPFE 48 + + VAT+N++ A N+ I + +I LQE +++ ++ E Sbjct: 28 TTLRVATYNIHAG--AGSDNVFDVDRTAEAIASLDASVISLQEVDVHWHSRSQWRDLATE 85 Query: 49 TLQSLNYHIETCG------------QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIE 96 +L+ HI ++ + + S + V E Sbjct: 86 LATTLDMHIFFGPIYSLDPTTPGAPRREFGNAILSSYPIVDAKNHEITRLSTQVPNPVPE 145 Query: 97 ATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI 156 + + + + + D + + R + EP + GD+N Sbjct: 146 PMPGFPEVEIDVNGTPVHVYSTHLDYRPDPAVRQAQVADMRRIMRCDHGEPQLLLGDFNA 205 Query: 157 IPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS 216 P+ + +D + Y+ Y A + Sbjct: 206 PPEAPELRPLWR---------------------KLSDVWAKSGQPDPGYT---YPASAPD 241 Query: 217 KNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + RID+I S + SA T SDH PV+ L + Sbjct: 242 R----RIDYIAASKRF--KVKSA-----ATPTTLASDHLPVVAELTL 277 >gi|284992404|ref|YP_003410958.1| endonuclease/exonuclease/phosphatase [Geodermatophilus obscurus DSM 43160] gi|284065649|gb|ADB76587.1| Endonuclease/exonuclease/phosphatase [Geodermatophilus obscurus DSM 43160] Length = 271 Score = 56.3 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 35/270 (12%), Positives = 80/270 (29%), Gaps = 32/270 (11%) Query: 4 VTVATWNVN-SI----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 V + T+N + + R + LA + + D+ICLQE D++F Sbjct: 20 VRLVTFNTHHGVGDDGRHDLPRLATVLAAADADLICLQEV---DRHF------------- 63 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT--INTQTLRIGNLYLPHG 116 + + +LS+ +++ D+ ++ + I +++ G Sbjct: 64 GGRSEDVDQALLLSRALDMQLAWGPAIDEPRRDEGLRRQYGNALLSRLPVLISDVHPLPG 123 Query: 117 NPITSTKYDDKISWIKRF-LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + + + + I + + D Sbjct: 124 SGEPRSALRTMVELDGAALWVTTTHLSTCSPEERAEQIAAIAQLHTEPMETGVLVGDFNA 183 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADS--WSKNKGIRIDHIMLSPEAT 233 + + + + + FW ++ RID + +SP Sbjct: 184 DPRAPELARLTGRFTDAWELAPDREDRAGWRFWQARRGGTHPARRPHRRIDQVWVSPGVG 243 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + A + SDH P++V L++ Sbjct: 244 --VSRAHVLDGA----GASDHLPLVVDLEV 267 >gi|261878952|ref|ZP_06005379.1| AP endonuclease domain protein [Prevotella bergensis DSM 17361] gi|270334463|gb|EFA45249.1| AP endonuclease domain protein [Prevotella bergensis DSM 17361] Length = 364 Score = 56.3 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 40/266 (15%), Positives = 78/266 (29%), Gaps = 22/266 (8%) Query: 4 VTVATWNVNSIRARIHN------LAAWIKENNPDIICLQETKTEDKNFPFETLQ-SLNYH 56 + V ++NV + +IK+ + DI+CLQE +++ E L +L Sbjct: 101 IKVLSYNVWLFAGWEDGKNDPNPILEYIKKQDADIVCLQE--SDNNEVGKEKLDSALGPI 158 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 + C +S Y I++ + I+ + + + N +L Sbjct: 159 YQYCDTAKRGKGNTISIYSKYPILSKEHIEYESRGNLSAAFKLMIDGEEVLVVNNHLETT 218 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 K + K ++ I I + Sbjct: 219 GLTVEEKSEFKTMIKGEMKAGKAESTSRHLVSKLGKASAIRAAQAQAVARYIAYHCDMPI 278 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYS---FWDYYADSWSKNKGIRIDHIMLSPEAT 233 + + D + + Y+ + + +RID+IM S Sbjct: 279 ILCGDFNDSPISYAHRTIAEGLTDCYVETANGPGISYHHNGFY----VRIDNIMCSAHFK 334 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIV 259 R+D + K SDH P+ Sbjct: 335 PFA--CRVDNEI----KNSDHYPIYC 354 >gi|328542833|ref|YP_004302942.1| Endonuclease/exonuclease/phosphatase family [Polymorphum gilvum SL003B-26A1] gi|326412579|gb|ADZ69642.1| Endonuclease/exonuclease/phosphatase family [Polymorphum gilvum SL003B-26A1] Length = 362 Score = 56.3 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 38/265 (14%), Positives = 71/265 (26%), Gaps = 29/265 (10%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V + N ++ +L ++K D++ LQE + + + ++ Sbjct: 123 LRVVSINTATLYLGTPDLLDYLKTVAADVVVLQE-------------ATWRWQLRRWEKR 169 Query: 64 SYNGVAILSKYQPIEIVTHLPG----DDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 N G + + + Sbjct: 170 EGNRRIAGHGPYFEHFAVGPEGDVVVFSRYPIISRRGIDPAVPGVLREVAHREFLDIELD 229 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + + ++ R A + + P P I D + Sbjct: 230 VAGRPVRIVAIHPASPRGARLWEARQAYYRHLSEALRGPAAGTD-LPTILIGDWNLSPWS 288 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 L+ G A T Y F DY W G +DH+ +SP Sbjct: 289 AHFRALLKAGGLKAAFPDTIPQTTRY-FADYRLR-WL--LGAPVDHVAVSPGL------- 337 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIP 264 +D G SDH P++V + +P Sbjct: 338 GVDRVGIGPDIGSDHLPLLVDIALP 362 >gi|296197295|ref|XP_002746222.1| PREDICTED: 5'-tyrosyl-DNA phosphodiesterase-like [Callithrix jacchus] Length = 392 Score = 56.3 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 45/285 (15%), Positives = 82/285 (28%), Gaps = 59/285 (20%) Query: 2 SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 S+ ++ TWNV+ + RAR + +++ +PD++ LQE P Sbjct: 142 SMFSLMTWNVDGLDLNNLAERAR--GVCSYLVLYSPDVVFLQEV------IPP------- 186 Query: 55 YHIETCGQKSYNGVAI-LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 Y + + + I+ L Q + + L + Sbjct: 187 YCSYLKKRAKNYEIITGHEEGYFTAIMLKKSRVKLKSQEIIPFPSTNMMRNLLCVHVNVS 246 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + + ++ + K + L+ Q +I+ D Sbjct: 247 GNELCLMTSHLESTKGHAKERMNQLKIVLK-------------KMQEAPESATVIFAGDT 293 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG------IRIDHIM 227 + L + H Y+ WD +S N G +R D I Sbjct: 294 NLRDQEVTKCGGLPSNIVDVWELLGKPKHCQYT-WDTQMNS---NLGITAACKLRFDRIF 349 Query: 228 LSPEATSLLHSARIDT---KPRGWTK------PSDHTPVIVSLDI 263 + I G K PSDH ++ +LDI Sbjct: 350 ----FRAAAEEGHIIPRSLDLLGLEKLDCGRFPSDHWGLLCNLDI 390 >gi|319795420|ref|YP_004157060.1| endonuclease/exonuclease/phosphatase [Variovorax paradoxus EPS] gi|315597883|gb|ADU38949.1| Endonuclease/exonuclease/phosphatase [Variovorax paradoxus EPS] Length = 274 Score = 56.3 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 43/286 (15%), Positives = 79/286 (27%), Gaps = 68/286 (23%) Query: 4 VTVATWNVN----SI----RARIHNLAAWIKENNPDIICLQETK----------TEDKNF 45 + VAT+N++ I R IHNL I++ + DI+CLQE + Sbjct: 31 LRVATYNIHKGVQGIGPARRLEIHNLGHAIEQLDADIVCLQEVRKMNRQAAARFARWPEL 90 Query: 46 P-FETLQSLNYHIETCGQ----KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT 100 P + L Y +G A+L+++ I D Q + Sbjct: 91 PQADFLAPEGYTAVYETNAVTRHGEHGNALLTRWPVIRTGHQDISDHRFEQRGLLHVVIE 150 Query: 101 INTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP 160 + Q + ++L + +I R + + + + Sbjct: 151 VEGQPVHAIVVHLGLIKGSRVRQIARLREFIDREVPAHEAVVVAGDFNDWGARMRYAMNA 210 Query: 161 HDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG 220 + T + Sbjct: 211 MGLRDASDLRG------------------PRTLTYPSRLPVAQ----------------- 235 Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRG--WTKPSDHTPVIVSLDIP 264 +D + + L S + PRG W + SDH P++ +P Sbjct: 236 --LDFVYG-RKLEPL--SCTV---PRGPIWARMSDHLPLVADFSLP 273 >gi|294011035|ref|YP_003544495.1| putative metal-dependent hydrolase [Sphingobium japonicum UT26S] gi|292674365|dbj|BAI95883.1| putative metal-dependent hydrolase [Sphingobium japonicum UT26S] Length = 248 Score = 56.3 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 36/269 (13%), Positives = 62/269 (23%), Gaps = 48/269 (17%) Query: 1 MSVVTVATWNVNSIRARI--------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52 M V VA++N IR I + + E + DII LQE + Sbjct: 17 MKTVRVASYN---IRKAIGTDRRRVPERVIDVLNELDADIIALQE-----------ADRR 62 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 + S Y+P+ + H+ A + + + Sbjct: 63 FGVRSAALPPWLLESI---SPYRPVPLNVHVDSMGWHGNAILVRKEAEVGAHDVLHLPCL 119 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 P G + + S ++ + + E Sbjct: 120 EPRGATMAEVTLGKASLRVFGMHLDLSGLWRRKQAAAVIHAASSRDAMPTVLMGDLNEWS 179 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 A + + + A R+D IM Sbjct: 180 AERG-CLADFARHYSFAPCGRSFHARRPVA-------------------RLDRIMHCGRL 219 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 L + K SDH P+ Sbjct: 220 --KLVDCGVHESA-AARKASDHLPIWAEF 245 >gi|269121001|ref|YP_003309178.1| endonuclease/exonuclease/phosphatase [Sebaldella termitidis ATCC 33386] gi|268614879|gb|ACZ09247.1| Endonuclease/exonuclease/phosphatase [Sebaldella termitidis ATCC 33386] Length = 243 Score = 56.3 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 40/268 (14%), Positives = 71/268 (26%), Gaps = 53/268 (19%) Query: 4 VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQET-----KTEDKNFPFETLQSLNYH 56 + + T+N+ R + + IK+ +PD I LQE ++ + + Q LNY Sbjct: 20 LKIMTYNIYGGRLA-NGTTIGRNIKKFDPDFISLQEVDYYTKRSNFNDIVKDIAQELNYS 78 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 + + + + Sbjct: 79 YYYFKKSRDYDSGEFGIGFVS--RYPIEKIFEYELPSIGAEKRQVIAAQIDEKIFSKKVL 136 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 T Y+ I + + GD+N++P I ND Sbjct: 137 IIDTHLDYNPNIKPKEMEALLNITAEFPGDVKFLTGDFNLLPTTEYYQQIIKEWNDTYLF 196 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 E RID+I L Sbjct: 197 DEP------------------------------------------RIDYIFGDKTNNWNL 214 Query: 237 HSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 S++ I + W+ SDH P ++++DI Sbjct: 215 RSSKFIKDEYLDWSTLSDHFPYMINVDI 242 >gi|149370646|ref|ZP_01890335.1| endonuclease/exonuclease/phosphatase family protein [unidentified eubacterium SCB49] gi|149356197|gb|EDM44754.1| endonuclease/exonuclease/phosphatase family protein [unidentified eubacterium SCB49] Length = 350 Score = 56.3 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 47/271 (17%), Positives = 71/271 (26%), Gaps = 36/271 (13%) Query: 3 VVTVATWNV---NS-----IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 + V ++NV NS A +K PDI+ LQE D + P + Sbjct: 101 TLKVLSYNVHLFNSYHFKDFDASEKKFNEIVKAYQPDILSLQEY--SDADDPK--IVGYP 156 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 Y K+ L Y I + P + + IN Sbjct: 157 YKYVHFKTKAVRNGVNLKYYLGHAIYSKYPI----INKGAFDFENAINNTLFVDIVKDKD 212 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 IS L+ ++ L D I + Sbjct: 213 TVRVYNLHLKSFGISPSISKLQEGDKKKLLGRMSQSFKDQAIQVSAILDHKNKSNYPSII 272 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDT----HHLYSFWDYYADSWSKNKGIRIDHIMLSP 230 +F + N D A + YSF D + RID I+ Sbjct: 273 TGDFNNTAFSYVYNELTEDMNDAYIEQGSGLGTTYSF-----DGFP----FRIDFILAEK 323 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 I + SDH P++ +L Sbjct: 324 YF-------DILSFTTIKETFSDHHPILSTL 347 >gi|147803328|emb|CAN68838.1| hypothetical protein VITISV_030956 [Vitis vinifera] Length = 1881 Score = 56.3 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 8/38 (21%), Positives = 20/38 (52%), Gaps = 2/38 (5%) Query: 4 VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETK 39 + + +WN + ++ + +++ PD++ QETK Sbjct: 830 MKIISWNTRGLGSKKKRRVVKDFLRSEKPDVVMFQETK 867 >gi|281421496|ref|ZP_06252495.1| AP endonuclease domain protein [Prevotella copri DSM 18205] gi|281404568|gb|EFB35248.1| AP endonuclease domain protein [Prevotella copri DSM 18205] Length = 365 Score = 56.3 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 36/251 (14%), Positives = 72/251 (28%), Gaps = 13/251 (5%) Query: 22 AAWIKENNPDIICLQE---TKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIE 78 A+++E + DI+CLQE T + Y T N + +LSKY + Sbjct: 125 IAYLQEQDADIVCLQEACPTSRNIEQIDSMLKPMYAYQDTTMHVNGGNCLMLLSKYPILS 184 Query: 79 IVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFA 138 ++ + + + I ++ Sbjct: 185 KERIPYESKGNMSVAYRLKVKDREVLLINNHLETTGLSLEDRRQFKNLVIGKLQVDTAEE 244 Query: 139 SQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT 198 + +L + + + Y E + + + Sbjct: 245 TSKLLVVKLAEATKKRAPEAEAVAKYIQQHKEQSIILCGDFNDGPISYAHRTIAKDLTDC 304 Query: 199 HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVI 258 + Y+ + +RID+IM S + ++D K SDH P+I Sbjct: 305 YIASGNGPGISYHHGGFF----VRIDNIMCSDDWEPY--ECKVDDKI----AVSDHYPII 354 Query: 259 VSLDIPEPRKK 269 L + ++K Sbjct: 355 CKLKMRPKKQK 365 >gi|323344686|ref|ZP_08084910.1| hypothetical protein HMPREF0663_11446 [Prevotella oralis ATCC 33269] gi|323093956|gb|EFZ36533.1| hypothetical protein HMPREF0663_11446 [Prevotella oralis ATCC 33269] Length = 270 Score = 56.3 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 37/263 (14%), Positives = 85/263 (32%), Gaps = 31/263 (11%) Query: 4 VTVATWNVNSIRARIHNL-----AAWIKENNPDIICLQET--KTEDKNFPFETLQSLNYH 56 + + T+N IR+ + A + PD++CL E ++ + F + Sbjct: 25 LKIITFN---IRSFEPDFNTQPYAELLWNEKPDVVCLNEVENRSSRQQFDGK-------- 73 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 Q N + + + +++ G + + ++ E N R L Sbjct: 74 YRDVVQDLANRIHLFGLFGYSYNLSNKDGKNPEENYKYCENELYGNAILSRYPILN---- 129 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 +++ + + + L E +I ++ + Sbjct: 130 --VSTIQLPRPTGSADQRGVVIADILLPEGKIIRVACTHLDHVGGQLEQAA-----VLTS 182 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSL 235 EV+ + G + + L + +D + G+ +ID I+ + Sbjct: 183 DEVKSNTYPTILCGDMNVGPNSDVIKKLLTVYDRLDNDSGTYLGLSKIDFILGTKG-KWE 241 Query: 236 LHSARIDTKPRGWTKPSDHTPVI 258 L S ++ + + SDH PV+ Sbjct: 242 LKSCKVLDRHLNGKELSDHCPVV 264 >gi|291396737|ref|XP_002714939.1| PREDICTED: sphingomyelin phosphodiesterase 2, neutral-like [Oryctolagus cuniculus] Length = 423 Score = 56.3 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 45/295 (15%), Positives = 89/295 (30%), Gaps = 39/295 (13%) Query: 9 WNVN--SI------RA-RIHNLAAWIKENNPDIICLQETKT-EDKNFPFETLQS-LNYHI 57 +N+N I RA R+ L ++ + D+ LQE + +D + + L Sbjct: 12 FNLNYWGIPYLSKHRAARLTRLGDFLNLESFDLALLQEVWSEQDFQYLKQKLSPTYPAAH 71 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN------- 110 +G+ + SK+ + H+ + F L + + Sbjct: 72 YFRSGIIGSGLCVFSKHPIQDTTQHVYTLNGYPYMIHHGDWFCGKAVGLLVLHLSGLVVN 131 Query: 111 ----LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 + +++ F + + ++ GD N+ P+ C Sbjct: 132 AYVTHLHAEYSRQKDIYLAHRVAQAWELAHFIHHTSKKADVVLLCGDLNMHPKDLGCRLL 191 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226 W LE + FQ + L + GIRID++ Sbjct: 192 KEWTGLFDAYLEAQD-FQGSEEGCTMVPGNCYVSQQDL--------KLFP--CGIRIDYV 240 Query: 227 MLSPEATSLLHSARIDT-----KPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQ 276 + L S + P + SDH ++ +L + +Q S + Sbjct: 241 LY-KAVPGLCISCKTFRTTTGHDPHNGSPLSDHEALMATLCVRHSPPQQNPSPTP 294 >gi|118385793|ref|XP_001026022.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena thermophila] gi|89307789|gb|EAS05777.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena thermophila SB210] Length = 354 Score = 56.3 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 52/289 (17%), Positives = 101/289 (34%), Gaps = 34/289 (11%) Query: 17 RIHNLAAWIKENNPDIICLQETKTED-KNFPFETLQSLNYHIET--CGQKSYNGVAILSK 73 R + IK N DI+CLQE + ++F ++ Q L Y I+ ++ + + K Sbjct: 46 RKWKIVEEIKLINSDIVCLQE--ADHIEDFYYQQFQDLGYQIQYALKPYRAEGILVMFKK 103 Query: 74 YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY---------LPHGNPITSTKY 124 + I H+ D ++ F +A + N L I + Sbjct: 104 DKFKMISEHVINFDNEIPDTFNKANYQRNNNALIIQLKHLISDLNIVIANTHLFWNPQNE 163 Query: 125 DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ 184 + K+ + L+ ++ + +E +I GD+N +P + + +E + + Sbjct: 164 EVKLLQTAQILQHLTKNYKQDENIILCGDFNSMPTSNVIKYITDKKEPHLSRVEKQFAKY 223 Query: 185 --KLQNMGFTDAIRATHDTHHLYSFWDYYADSW--------SKNKGIRIDHIMLSPEAT- 233 M + + S+ DY KG +D+I+ +P Sbjct: 224 VLIKDMMAIHNMFSEMNLIDLKSSYDDYLKTGKHPEFTNYTQNFKGT-LDYILFNPNMKQ 282 Query: 234 ---SLLHSARID-----TKPRGWTKPSDHTPVIVSLDIPEPRKKQQDST 274 S + ID PSDH P+ I + + Q+ ++ Sbjct: 283 FQLSEVREIPIDLIKKQKGLPSQDYPSDHLPITAIFSINQDGQDQKQNS 331 >gi|86131717|ref|ZP_01050314.1| endonuclease/exonuclease/phosphatase family protein [Dokdonia donghaensis MED134] gi|85817539|gb|EAQ38713.1| endonuclease/exonuclease/phosphatase family protein [Dokdonia donghaensis MED134] Length = 343 Score = 56.3 bits (134), Expect = 5e-06, Method: Composition-based stats. Identities = 46/274 (16%), Positives = 75/274 (27%), Gaps = 47/274 (17%) Query: 3 VVTVATWNV------------N-SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFET 49 +T+ T+NV N RA A+I++ NPDI+CLQE P Sbjct: 99 TLTLLTYNVRQFNVYGWVEEANVGKRA-----IAFIEDQNPDIVCLQEYH------PDFE 147 Query: 50 LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 L + Y + + N + IV D I A + T+R Sbjct: 148 LDAKKYPFKHKVMRPANSKFGQVIFSKFPIVHSGSLDFGKKGNNGIYADIKVGEDTIRAY 207 Query: 110 NLYLPHGNPITS-TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168 N++ S + S + + + F P Sbjct: 208 NMHFQSFRLSPSLNNLQKENSKKLLGRLGVAFEKQEGQVKKFLQSEAASPHKVIVAGDFN 267 Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 + DA ++D +RID I+ Sbjct: 268 NS--------ATSYMYRKVRGDKVDAFAKAGSGTGATFWFDIIP--------LRIDFILA 311 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + +D + G SDH P + + Sbjct: 312 DEQLE------VLDFETYGDIDLSDHKPSMATFK 339 >gi|254248065|ref|ZP_04941386.1| Metal-dependent hydrolase [Burkholderia cenocepacia PC184] gi|124872841|gb|EAY64557.1| Metal-dependent hydrolase [Burkholderia cenocepacia PC184] Length = 327 Score = 55.9 bits (133), Expect = 5e-06, Method: Composition-based stats. Identities = 41/303 (13%), Positives = 81/303 (26%), Gaps = 61/303 (20%) Query: 2 SVVTVATWNV------NSI----R--ARIHNLAAWIKENNPDIICLQE-TKTED------ 42 S + + WN+ + + R A I L + D++CLQE T+ D Sbjct: 42 STMRLIDWNIQWGRDADGVVDLPRTVAAIRRLGDF------DVLCLQELTRGFDALPGRP 95 Query: 43 --KNFPFETLQSLNYHIE-----------TCGQKSYNGVAILSKYQPIEIVTHLPGDD-- 87 F Y I + G AI ++ ++ Sbjct: 96 GPDQFAELAALLPGYTIVDAIGADLPAIRPGAPRRQFGNAIATRLPVGRVLRQSLPWPAD 155 Query: 88 ---LDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL 144 + ++ + +LR+ +L + + D + R + + Sbjct: 156 AGAPSMPRAALDIELQASFGSLRVVTTHLEYYSARQRLAQVDALRDRHREACAHADQPAP 215 Query: 145 EEPLIFAGDYNIIPQPHDCYNPIIWENDACFT----LEVRQSFQKLQNMGFTDAIRATHD 200 E P+ D+ + + + Sbjct: 216 AETPEGPFSATGQPRDAIVCGDFNSAFDSDAYRRFLEPIADAPGFVDAWIARHPGHTPPP 275 Query: 201 THHLY-S-FWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVI 258 T +Y + W + D + ++ + ID R SDH PV+ Sbjct: 276 TAGIYDTVQWSDGPLA--------CDFVFVTDTLLPRVIGCEIDGDVR----ASDHQPVL 323 Query: 259 VSL 261 + L Sbjct: 324 LEL 326 >gi|225448081|ref|XP_002273589.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1715 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 24/245 (9%), Positives = 64/245 (26%), Gaps = 28/245 (11%) Query: 16 ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75 ++ + A I+ D+ CLQETK + ++SL + Sbjct: 778 SKRKVIKALIRSQRVDVFCLQETKIQA--MSEGVVRSLG----------TGRFLGWGALE 825 Query: 76 PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135 + ++ + + R+ N+ T + Sbjct: 826 ASGSAGGILVCWDRRMMDVLDVEVGQFSISCRVRNVEDGFCWMFTGVYGPFSRDERECLW 885 Query: 136 RFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAI 195 G +++ +N + + + + ++ ++ M + Sbjct: 886 EELGAIR---------GLWDVPWCLGGDFNITLLQGERSRQGRITRAMRRFAQMVDELEL 936 Query: 196 RATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHT 255 ++ R+D +++ + R SDH Sbjct: 937 TDLPLQGGRCTW----NGGRGSQSWARLDRFLVTQNWLDHFSGVV---QSRLPRPTSDHF 989 Query: 256 PVIVS 260 P+++ Sbjct: 990 PILLE 994 >gi|307720642|ref|YP_003891782.1| Endonuclease/exonuclease/phosphatase [Sulfurimonas autotrophica DSM 16294] gi|306978735|gb|ADN08770.1| Endonuclease/exonuclease/phosphatase [Sulfurimonas autotrophica DSM 16294] Length = 338 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 49/323 (15%), Positives = 86/323 (26%), Gaps = 72/323 (22%) Query: 2 SVVTVATWNV--------NS------------------IRARIHNLAAWIKENNPDIICL 35 + +AT+NV N + ++ N+A IK+ NPDII L Sbjct: 18 KTLKIATYNVENLFDLQRNGHEYKEYIPYTKSNWNDTNYKVKLKNIAKVIKDMNPDIIGL 77 Query: 36 QET------KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLD 89 QE K E++ Y+ +++ VAILSK + Sbjct: 78 QEIESLQALKDLRYALKRESI-YYQYYKIANLKRTTVKVAILSKIPFVYTHEIAVTSSYR 136 Query: 90 VQARFIEATFTINTQTLRIGNLYLPHGNPITSTK-----YDDKISWIKRFLRFASQRLEL 144 + N + N + P + ++ + + Sbjct: 137 YRNILEAKFKINNEDLYVLVNHWKSKAGPESMRIVSAKKLKKRMQELGAKKNIIALGDLN 196 Query: 145 EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL 204 + + I + K+ + + D+ Sbjct: 197 SDYEEYKIFKRKRKHNDTDGITGINHILGTINYQQDAKHTKIDSDELYNLW-YDTDSAKR 255 Query: 205 YSFWDYYADSWSKNKGIRIDHIMLSPEATS------LLHSARIDTKPR------------ 246 YS+ Y + +D+I++S LHS + KP Sbjct: 256 YSYI-YRGKKEA------MDNILISAALLDKKGLDYKLHSISVYEKPYLFKGKSIFRWQT 308 Query: 247 --------GWTKPSDHTPVIVSL 261 SDH PVI Sbjct: 309 TRSRLRRHKGKGYSDHLPVIAEF 331 >gi|149279450|ref|ZP_01885580.1| hypothetical protein PBAL39_16661 [Pedobacter sp. BAL39] gi|149229743|gb|EDM35132.1| hypothetical protein PBAL39_16661 [Pedobacter sp. BAL39] Length = 304 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 43/294 (14%), Positives = 75/294 (25%), Gaps = 51/294 (17%) Query: 6 VATWNV-----------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 +AT+NV N R+ + I+ ++ DI QE + N L Sbjct: 24 IATYNVRYKNSGDEKNGNGWSQRMPVVTDIIQFHDFDIFGAQEILQQQLNDLDSKLTGYG 83 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 H+ + + L + + + + RI + Sbjct: 84 -HVGVGRDDGKRAGEHAMIFYKKDKFKLLDSGNFWLSKQEDVPNKGWDAALPRICSWGAF 142 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 Y E + I + + Sbjct: 143 QHLASGRKFYFFNT-----HFDHVGVVARRESAKLILRKIRAIAGDTPTILTGDF--NVD 195 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 T E+ Q + + T+ + +D + S RIDHI+LS Sbjct: 196 QTNEIYGILTGQQLADAFETTAFRYATNGTINHFDINTKTKS-----RIDHILLSKSI-- 248 Query: 235 LLHSARIDTK-PRGWTK------------------------PSDHTPVIVSLDI 263 + + T R K PSDH PV+ +D+ Sbjct: 249 KVKRYGVLTDTYRSAGKENAEVSTSGNFPKEVSLQRYEARLPSDHFPVMAVIDL 302 >gi|282880539|ref|ZP_06289246.1| endonuclease/exonuclease/phosphatase family protein [Prevotella timonensis CRIS 5C-B1] gi|281305642|gb|EFA97695.1| endonuclease/exonuclease/phosphatase family protein [Prevotella timonensis CRIS 5C-B1] Length = 361 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 34/267 (12%), Positives = 78/267 (29%), Gaps = 18/267 (6%) Query: 4 VTVATWNV---NSI--RARIHNLAAWIKENNPDIICLQE---TKTEDKNFPFETLQSLNY 55 + V ++NV + + + + +++ N DI+CLQE T+ + ++ Sbjct: 101 IKVLSYNVWYFAGWEDKGKANPILTYLRAQNADIVCLQEAETTEVGKERIEAALNPIYSF 160 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 H + +K + +AI SK+ ++ + + F + + Sbjct: 161 HDFSLTEKGSDRMAIYSKFPILKKEAIHYPSEGNHSTAFFLDIKGDTVIVINNHLESIGL 220 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + ++ + + + Y + Sbjct: 221 TEEDKDSFKGMVKGELETDSIKIGSKSLYHKLANATKIRAPQAKAVAQYIEQHQDKTIIL 280 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 + +R + Y+ + +RID +M S Sbjct: 281 CGDFNDGPNSFARRTIAKHLRDCYIETGNGPGISYHLGGFY----VRIDQLMCSKNLKPY 336 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262 ++D K K SDH P+ L+ Sbjct: 337 --HCQVDNKI----KTSDHYPIYCWLE 357 >gi|296169146|ref|ZP_06850802.1| endonuclease/exonuclease/phosphatase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896195|gb|EFG75859.1| endonuclease/exonuclease/phosphatase [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 254 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 32/271 (11%), Positives = 77/271 (28%), Gaps = 31/271 (11%) Query: 4 VTVATWNV-------NSIRARIHNLAAWIKENNPDIICLQET-----KTEDKNFPFETLQ 51 + VAT+N+ + + + L ++ +PD++ LQE ++E + + Sbjct: 1 MRVATFNILHGRTVGDGV--ELQRLRDCVRRLDPDVLSLQEVDCDQPRSERADLTAVAAE 58 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 ++ + ++ + + + Q +R+ + Sbjct: 59 AMG----AVEHRFVAAISGTPGATWMAATGREQPGTAAYGIALLSRYPVASWQVVRLPRI 114 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 + + + R A R + + + +P + + + Sbjct: 115 PMRFPMYLPGPNRVMVVDEEPRAAVIAQLRTPMGGLTVANTHLSFVPGWNRRQLRRLVHD 174 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 F + +F A +DHI+ Sbjct: 175 LRGFPGPRLLTGDLNMTPKTVRRWSGMRALASAVTF-PADAPDRQ------LDHILTDDR 227 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 L + +P G SDH P++V L+ Sbjct: 228 ---RLRGGAVAAEPMGI---SDHRPLVVDLE 252 >gi|269127256|ref|YP_003300626.1| endonuclease/exonuclease/phosphatase [Thermomonospora curvata DSM 43183] gi|268312214|gb|ACY98588.1| Endonuclease/exonuclease/phosphatase [Thermomonospora curvata DSM 43183] Length = 235 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 36/267 (13%), Positives = 73/267 (27%), Gaps = 36/267 (13%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 M + V ++N+ S+R L I+ D++CLQE P + Sbjct: 1 MRRLRVLSYNIRSMRDDRAALVRVIRACAADLVCLQEV-------PRLA-PTWRARRRAL 52 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 ++ VA + + ++ + + ++ + L + + I Sbjct: 53 AARTGLTVACGRRAAGLAVLAGRRVRLHHAEHHLLSRVPGLHRRGLALVVAEIAGARVIV 112 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + + D + + L + P++ D E Sbjct: 113 ADTHLDLDASARLAHTAELLALLKRARDRY-------------EAPVVLCGDINEEPEGP 159 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 A + + RID I P + Sbjct: 160 SWNALTGFFTDAYAAAPRGPAAT----YSSRRPAR------RIDGIFTDPRIE--VLGCG 207 Query: 241 IDTKP---RGWTKPSDHTPVIVSLDIP 264 + P + + SDH PV+ L +P Sbjct: 208 LPPGPAPAADYPRASDHLPVLAELRLP 234 >gi|118150942|ref|NP_001071387.1| bucentaur-2 [Bos taurus] gi|117414086|dbj|BAF36506.1| p97Bucentaur-2 [Bos taurus] gi|151556961|gb|AAI49203.1| Bucentaur-2 [Bos taurus] gi|296478240|gb|DAA20355.1| bucentaur-2 [Bos taurus] Length = 634 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 35/263 (13%), Positives = 64/263 (24%), Gaps = 27/263 (10%) Query: 6 VATWNVNSIRARIHNLAAWIKEN----NPDIICLQETKTE-DKNFPFETLQSLNYHIETC 60 + TWNV S+ +K+ N DI+ + E K + H Sbjct: 247 IGTWNVRSMN---PGKLDVVKQEMERINIDILGISELKWTGMGELNSDD------HYIYY 297 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + ++ + + G +L I P Sbjct: 298 CGQQSLRRNGVAIIVNKRVRNAVIGCNLKNDRMISVRFQGKPFNLTVIQVYAPTPYAPEP 357 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + + L + IP+ + + +E Sbjct: 358 EVYRFYEDLQHLLEITPKIDVLFIIGDWNAKVGSQEIPRITGKFGLGVQNEAGRRLIE-- 415 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 QN LY++ + ID+I+ S + SA+ Sbjct: 416 ---FCYQNRLVIANTLFQQHKRRLYTWTSPDGRYRDQ-----IDYIICRQRWRSSVQSAK 467 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263 G SDH +I + Sbjct: 468 TRP---GADCGSDHKLLIAKFRL 487 >gi|73540148|ref|YP_294668.1| endonuclease/exonuclease/phosphatase [Ralstonia eutropha JMP134] gi|72117561|gb|AAZ59824.1| Endonuclease/exonuclease/phosphatase [Ralstonia eutropha JMP134] Length = 262 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 36/272 (13%), Positives = 68/272 (25%), Gaps = 40/272 (14%) Query: 1 MSVVTVATWNVN----SI--RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 M + V T+N++ I R RI N+ A + + DI+ LQE + + L Sbjct: 1 MMKLRVVTYNIHKGVTGIARRPRIQNVRAGLHAMDADIVFLQEVQDRNDRLVAAAL---- 56 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL- 113 + Y + + + + ++ L I + Sbjct: 57 ----FDPDHTQLNYLATDSYPHSVYGRNAVYEHGHHGNAILSRHPILMSENLDISDHRFE 112 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 G + + + R + + ND Sbjct: 113 QRGLLHAVADVNGVEAHLICVHFGLFARSRARQAEALVERVRTVVPSTAPLVIAGDFNDW 172 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 L+ + H +W +D I Sbjct: 173 NHRLDSQICNTLGAVEASHARGARLHTFPSHMPWWQ-------------LDRIY------ 213 Query: 234 SLLHSARIDTKP----RGWTKPSDHTPVIVSL 261 + I+ R W + SDH P++ L Sbjct: 214 --VRGFEIERAHALTGRDWAQRSDHVPLVAEL 243 >gi|225436869|ref|XP_002271044.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 469 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 41/253 (16%), Positives = 77/253 (30%), Gaps = 19/253 (7%) Query: 15 RARIHNLAAWIKENNPDIICLQETKTEDKNF-----PFETLQSLNYHIETCGQKSYNGVA 69 R+R + ++E + DI+ LQ+ K E++ +NY + G A Sbjct: 192 RSR-RTVVEVLRELDADILALQDVKAEEEKAMKPLSDLAAALGMNY-VFAESWAPEYGNA 249 Query: 70 ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKIS 129 ILSK+ DD D + + +L H + K + I Sbjct: 250 ILSKWPIKRWKVQKIFDDTDFRNVLKATIDVPQAGEVNFHCTHLDHLDENWRMKQINSII 309 Query: 130 WIKRFLRFASQRLEL-EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN 188 + L +E + + I + ++ + + L+ +Q Sbjct: 310 QSNEGPHILAGGLNSLDETDYSSERWTDIVKYYEEMGKPTPKVEVMKFLKSKQYTDAKDF 369 Query: 189 MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGW 248 G +++ G R+D+I+ SP + Sbjct: 370 AGECESVVMIAKGQ------SVQGTCK---YGTRVDYILASPSSPYKFVPGS--YSVFSS 418 Query: 249 TKPSDHTPVIVSL 261 SDH V V + Sbjct: 419 KGTSDHHIVKVDI 431 >gi|331243524|ref|XP_003334405.1| CCR4-NOT transcription complex [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309313395|gb|EFP89986.1| CCR4-NOT transcription complex [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 786 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 42/276 (15%), Positives = 75/276 (27%), Gaps = 35/276 (12%) Query: 17 RIHNLAAWIKENNPDIICLQETKTED-KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75 R + + + DIICLQE E ++F ++L+ Y + + Sbjct: 512 RKDLILQELMQYGADIICLQEVDVEQYEDFFVQSLKDQGYEGVFYPKSRARTMESHKTED 571 Query: 76 PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN---------------LYLPHGNPIT 120 V + ++ + I + Sbjct: 572 MFNRVMTKDNIAVIALLEHRQSGTRQIVANVHIHWDPEFRDVKLIQTAMLMDQISEISSR 631 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + + + + S + P I GD+N IPQ + + Sbjct: 632 FARLPKRTNLSNNYRTAPSYSDGTQIPTIICGDFNSIPQS----GVYDYLSQGLIPSTHP 687 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN----KGIRIDHIMLSPE----- 231 + I + YS D ++ KG+ ID+I S E Sbjct: 688 DFCKNNYGPYTQFGIHHSLKLKSAYSNLDSKELPFTNYTPGFKGV-IDYIWYSTESLQVI 746 Query: 232 -ATSLLHSARIDTKPRGWT---KPSDHTPVIVSLDI 263 + A K G+ SDH PV+ + Sbjct: 747 GLLGKIDDAY-LKKVVGFPNAHFASDHVPVLAEFKV 781 >gi|182626212|ref|ZP_02953970.1| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens D str. JGS1721] gi|177908476|gb|EDT71009.1| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens D str. JGS1721] Length = 262 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 47/276 (17%), Positives = 80/276 (28%), Gaps = 28/276 (10%) Query: 1 MSVVTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51 M + V T+N+ N R + IK++ PDII QE + + L Sbjct: 1 MRNLKVMTFNLKYDFKAQDNNEWSQRCLRITKLIKDHLPDIIGTQEGLIHMLDDMDDLLD 60 Query: 52 SLNY---HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108 ++ +E G+ +N + L + + ++ ++ Sbjct: 61 EYSWVGEDLEGNGKDEFNAIFFLKNKFEVLEWNQFWLSKTPNIKGSKDFNSSLPRICTKL 120 Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL-EEPLIFAGDYNIIPQPHDCYNPI 167 G I L+ ++ II +CY Sbjct: 121 KLKDKISGLKIDIYNTHLDHESELAREEGIKIILKEVKKNYEIYKTPYIIMGDFNCYLED 180 Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227 N F + + + H Y G ID+I+ Sbjct: 181 NLFNIIREEETNNTCFNVCYDNIKNNILGTFHYFKGGY-------------DGRIIDYIL 227 Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 S E + S ID + PSDH PVI L++ Sbjct: 228 YSKEYE--IKSLNIDNRKINGGYPSDHYPVICELEL 261 >gi|163790442|ref|ZP_02184873.1| hypothetical protein CAT7_03019 [Carnobacterium sp. AT7] gi|159874346|gb|EDP68419.1| hypothetical protein CAT7_03019 [Carnobacterium sp. AT7] Length = 271 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 38/279 (13%), Positives = 74/279 (26%), Gaps = 31/279 (11%) Query: 4 VTVATWNVNS-------IRARIHNLAAWIKENNPDIICLQE-----TKTEDKNFPF---- 47 + T N +S I+ + NL I + D+I LQE T Sbjct: 1 MKFLTLNTHSWMEKDPLIK--LKNLCDAITRQSFDVIALQEVNQLMTSATVDQSLLVTFS 58 Query: 48 -----ETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN 102 ++ N+ + NG+ ++P I + L V + Sbjct: 59 ATNNEHPIKEDNFAFLLQQELQKNGLEYYWTWEPSHIGYDRYDEGLAVLSLKPIQETRSF 118 Query: 103 TQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD 162 + I + + + + + Sbjct: 119 FASENTAYNDYKSRKVIGIKSENQWFFNVHLGWWQDKHDPFPGQWKKCTAHFATL----- 173 Query: 163 CYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR 222 PI D ++Q +L + D ++ D G+R Sbjct: 174 -KEPIFLLGDFNNPAHIKQEGYELVTQNWFDTYHLAAQKDTGFTVADAIDGWSENQSGLR 232 Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 ID+I + S+++ SDH ++V + Sbjct: 233 IDYIFANQPV--KTISSQVIFNDNNEPIISDHFGIVVEI 269 >gi|163796022|ref|ZP_02189985.1| Endonuclease/exonuclease/phosphatase [alpha proteobacterium BAL199] gi|159178777|gb|EDP63315.1| Endonuclease/exonuclease/phosphatase [alpha proteobacterium BAL199] Length = 248 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 31/264 (11%), Positives = 67/264 (25%), Gaps = 41/264 (15%) Query: 3 VVTVATWNVN---S--IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57 ++ VA++N+ +R R + A + E + D++ LQE + Sbjct: 1 MLRVASYNICKSVGTDLRRRPDRVLAVLGELDADVVALQEV-------------DRRFGA 47 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 + VA S V ++ + L + + Sbjct: 48 RASVLSPDSIVAETSFKPVRFGVRPDSLGWHGNALLIGRDVEVLSHRRLELPSFEPRGAI 107 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 I + L + + + + +TL Sbjct: 108 LADLRVRGTAIRVLGMHLGLLGLWRRRQARAVLMTLEALEEPLPTVMMGDLN----EWTL 163 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 ++ ++ H + + +D I+ S + + Sbjct: 164 GGGCLAMFAKHHHVAVPGQSFHSRRPIAT----------------LDRIITSLDL--RVE 205 Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261 A + SDH PV S+ Sbjct: 206 DAGVHVSA-KSRVASDHLPVWASI 228 >gi|147844782|emb|CAN79044.1| hypothetical protein VITISV_043757 [Vitis vinifera] Length = 1256 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 31/263 (11%), Positives = 71/263 (26%), Gaps = 38/263 (14%) Query: 3 VVTVATWNV-----NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57 + V +WNV NS R I + I+ D+ C+Q TK + Sbjct: 536 TLRVLSWNVRGANDNSKRKVIKAM---IRSQRVDLFCIQGTKIQ---------------- 576 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 GV + ++ + +G + Sbjct: 577 -----TMSEGVVRSVGSGRFLDWGAMGAQGSTGGILICWDKRSLELLEMEVGQFSISCRL 631 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + + EE G ++ +N + + + Sbjct: 632 KNVEDGLVWIFIGVYGPFTRKERESMWEELGAIRGIWDDPWCVGGDFNVTLSQRERSSQG 691 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLL 236 + + ++ + + ++S+ + N+ R+D +++ L Sbjct: 692 SLNGAMRRFAQVVDDLELLDLPLQGVVFSWSEGR-----NNQSWARLDRFLVTQSWLDLF 746 Query: 237 HSARIDTKPRGWTKPSDHTPVIV 259 + R SDH P+++ Sbjct: 747 RGVV---QSRLPRPTSDHFPILL 766 >gi|309804836|ref|ZP_07698898.1| conserved hypothetical protein [Lactobacillus iners LactinV 09V1-c] gi|309809773|ref|ZP_07703627.1| conserved hypothetical protein [Lactobacillus iners SPIN 2503V10-D] gi|308165775|gb|EFO67996.1| conserved hypothetical protein [Lactobacillus iners LactinV 09V1-c] gi|308169952|gb|EFO71991.1| conserved hypothetical protein [Lactobacillus iners SPIN 2503V10-D] Length = 96 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 15/86 (17%), Positives = 32/86 (37%), Gaps = 17/86 (19%) Query: 4 VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDK-------NFP 46 + +WN++S+ A + + IK+ NPD++ +QETK + Sbjct: 1 MLFISWNIDSLNAALTGDSDRANETRSVLNKIKKANPDVVAIQETKLRANGPTKKHCDIL 60 Query: 47 FETLQSLNYHIETCGQKSYNGVAILS 72 + + Y + + + A Sbjct: 61 ADIFEDYQYVWRSSQEPARKSYAGTM 86 >gi|290998796|ref|XP_002681966.1| predicted protein [Naegleria gruberi] gi|284095592|gb|EFC49222.1| predicted protein [Naegleria gruberi] Length = 354 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 42/262 (16%), Positives = 74/262 (28%), Gaps = 33/262 (12%) Query: 25 IKENNPDIICLQETKTED--KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTH 82 IK+ N D+ICL E ++ +F + LQS+NY + IV Sbjct: 104 IKQVNADVICLMEVESLQVLDSFNEKYLQSMNYAYSILIDGRDPRSIDVGVLSRYPIVNI 163 Query: 83 LPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRL 142 F+ + L I GN + S K +RL Sbjct: 164 RSNRHATYPGEKTRYIFSRDLLELDIE----FPGNNNLTIYATHLTSMSKGREESKDRRL 219 Query: 143 ELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC-FTLEVRQSFQKLQNMGFTDAIRATHDT 201 + + I D + + L++ D I + Sbjct: 220 VQ--VDYICDRIEKSWKDKNYKGNFIVLGDMNDYNDSETSLGKLLKHDHMADIISQRLPS 277 Query: 202 HHLYSFWDYYADSWSKNKGIRIDHIMLSPEA-------------------TSLLHSARID 242 ++ + +++++ +D++ +S RI Sbjct: 278 DEQWTHYYNRGNAYNQ-----LDYMFISKHLLLRNPRAKPVIFRKGLPKRAHSFTGKRIK 332 Query: 243 TKPRGWTKPSDHTPVIVSLDIP 264 + K SDH PV V L Sbjct: 333 GVGQNEPKASDHCPVYVDLSFD 354 >gi|94497212|ref|ZP_01303784.1| metal-dependent hydrolase [Sphingomonas sp. SKA58] gi|94423317|gb|EAT08346.1| metal-dependent hydrolase [Sphingomonas sp. SKA58] Length = 232 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 40/272 (14%), Positives = 71/272 (26%), Gaps = 48/272 (17%) Query: 1 MSVVTVATWNVNSIRARI--------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52 M + VA++N IR I + + E + DII LQE + Sbjct: 1 MKTIRVASYN---IRKAIGTDRRRIPERVLEVLGEVDADIIALQE-----------ADRR 46 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 + K P+ I T G + EA ++ Sbjct: 47 FGVRSAAIPPLLL-DMLSGYKSVPLNIQTDSMGWHGNAILVRKEAEIGVH---------- 95 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 + + + + + + L +G + Sbjct: 96 ----DVLHLPYLEPRGATMAEITAKDITVRVFGMHLDLSGLWR--------RRQAAAVIH 143 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 A E + ++ D YSF ++ R+D IM + Sbjct: 144 AAAQGESLPTILMGDLNEWSANGGCLADFGRHYSFAPCGRSFHARRPVARLDRIMHCSQL 203 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 T L + + K SDH P+ + Sbjct: 204 T--LKTCGVHESA-AARKASDHLPIWAEFSVD 232 >gi|225425732|ref|XP_002271092.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 216 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 24/239 (10%), Positives = 61/239 (25%), Gaps = 29/239 (12%) Query: 4 VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + TWNV ++ + +I+ D++C+QETK ++ Sbjct: 3 MKIITWNVRGANDSSKRKIIKNYIRNQRVDLMCIQETKIQE------------------- 43 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 G+ L + + G L Sbjct: 44 --MSEGIVRSLGSGRFLDWRALNAEGAAGGILICWDKRVLEILDWEEGQFSLSCRFKTIE 101 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + + + EE G ++ +N +++++ Sbjct: 102 NGATWVFTGVYGPFTKVEREGMWEELGAIRGLWDDPWCLGGDFNITLFQHERSSQRRTSS 161 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSA 239 + ++ + +++ N+ R+D ++SP Sbjct: 162 AMRRFAEFVDDLELVDLTLQGGEFTW-----SGGLNNQAWARLDRFLVSPSWLDQFSGV 215 >gi|309804030|ref|ZP_07698111.1| conserved hypothetical protein [Lactobacillus iners LactinV 11V1-d] gi|309807800|ref|ZP_07701732.1| conserved hypothetical protein [Lactobacillus iners LactinV 01V1-a] gi|308163798|gb|EFO66064.1| conserved hypothetical protein [Lactobacillus iners LactinV 11V1-d] gi|308168902|gb|EFO70988.1| conserved hypothetical protein [Lactobacillus iners LactinV 01V1-a] Length = 96 Score = 55.9 bits (133), Expect = 6e-06, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 32/86 (37%), Gaps = 17/86 (19%) Query: 4 VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDK-------NFP 46 + +WN++S+ A + + IKE NPD++ +QETK + Sbjct: 1 MLFISWNIDSLNAALTGDSDRAHETRSVLNKIKEANPDVVAIQETKLRANGPTKKHCDIL 60 Query: 47 FETLQSLNYHIETCGQKSYNGVAILS 72 + + Y + + + A Sbjct: 61 ADIFEDYQYVWRSSQEPARKSYAGTM 86 >gi|325929159|ref|ZP_08190302.1| metal-dependent hydrolase [Xanthomonas perforans 91-118] gi|325540478|gb|EGD12077.1| metal-dependent hydrolase [Xanthomonas perforans 91-118] Length = 287 Score = 55.9 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 36/269 (13%), Positives = 70/269 (26%), Gaps = 26/269 (9%) Query: 5 TVATWNV------NS---IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55 V ++NV + + R + A IK+ +PD+ QE +E F E L Y Sbjct: 35 RVMSFNVRVPADTDGDKRWQVRRAAMVALIKQTHPDVFGTQELVSEQAAFLAEQLPD--Y 92 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 G++ + + + ++ + + + A L + Sbjct: 93 RWFGQGRRGDDSDEHMGVFYDARVLKVVESGNFWLSDTPERAGSITWGNVLPRMATWALF 152 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 ++ + R + + +P + +D Sbjct: 153 ERRSDKRRF--YLFNTHFPYRDEDEPARERSARLILSRIAQLPATVPVVLTGDFNSDPDK 210 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 + +T ++ RID I+ Sbjct: 211 ITYPTLTAVLRDARAQASKRSGPENTFQDFTTHPTR----------RIDWILY-RGLRP- 258 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 G PSDH PV+ D P Sbjct: 259 -TRFATLDDRPGGILPSDHYPVMAEFDWP 286 >gi|147788325|emb|CAN69965.1| hypothetical protein VITISV_039410 [Vitis vinifera] Length = 596 Score = 55.9 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 24/41 (58%), Gaps = 2/41 (4%) Query: 3 VVTVATWNVNSI--RARIHNLAAWIKENNPDIICLQETKTE 41 ++ + +WNV + R++ + + IK D+ C+QETK + Sbjct: 2 ILRILSWNVRGVNDRSKRKIIKSVIKNQKVDLFCIQETKVQ 42 >gi|37523648|ref|NP_927025.1| hypothetical protein gll4079 [Gloeobacter violaceus PCC 7421] gi|35214653|dbj|BAC92020.1| gll4079 [Gloeobacter violaceus PCC 7421] Length = 278 Score = 55.9 bits (133), Expect = 7e-06, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 29/65 (44%), Gaps = 3/65 (4%) Query: 4 VTVATWNV---NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 + + +WNV N R + ++ PDI+ LQE + + + L +++ + Sbjct: 42 LKILSWNVAKSNHDRRFTREFLSILEREQPDIVFLQEVRVDAETMRAVDLAGMHWSVAPN 101 Query: 61 GQKSY 65 + ++ Sbjct: 102 YKDTH 106 >gi|319781575|ref|YP_004141051.1| endonuclease/exonuclease/phosphatase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317167463|gb|ADV11001.1| Endonuclease/exonuclease/phosphatase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 300 Score = 55.6 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 39/310 (12%), Positives = 81/310 (26%), Gaps = 61/310 (19%) Query: 4 VTVATWNV------NSI----RARIHNLAAWIKENNPDIICLQET--KTEDKNFPF--ET 49 + + ++N+ + RA + A D+I LQE + NF E Sbjct: 1 MKLVSYNIQYGFGGDGCYDLSRAA--RIVA-----GADVIALQEVERHWQRSNFDDQPEL 53 Query: 50 LQSL--NYHIETCGQKSYNG--------------VAILSKYQPIEIVTHLPGDDLDVQAR 93 L SL +YH + + + + + L + R Sbjct: 54 LSSLLPDYHWVYGPAFDMDASERHDGRLVNRRRQFGTMVLSKLPIVWSRLHALPMRRTLR 113 Query: 94 FIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRL------ELEEP 147 + +R + + + ++ +L +R Sbjct: 114 PLNTRNAALECMIRTPAGPVRVLSLHLAHIAAEERLEQIDYLLAEHRRAPSDGGPWSGVD 173 Query: 148 LIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT--------- 198 ++ + IW D + + + + + Sbjct: 174 DEPTRNWTSGEAEPENPLAAIWMGDFNMEPGSAEYRRIVGSTPYHRGAAYHSGFVDAAAV 233 Query: 199 --HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTP 256 ++ +K R+DH + + S R D SDH P Sbjct: 234 AGEPVPDFHTHVKTIDGRLAK---RRLDHCFVGGMFAGRVRSIRADID----EVASDHFP 286 Query: 257 VIVSLDIPEP 266 + V +D+ P Sbjct: 287 LRVDIDLETP 296 >gi|187476631|ref|YP_784654.1| endonuclease/exonuclease/phosphatase family protein [Bordetella avium 197N] gi|115421217|emb|CAJ47722.1| putative endonuclease/exonuclease/phosphatase family protein [Bordetella avium 197N] Length = 286 Score = 55.6 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 42/291 (14%), Positives = 91/291 (31%), Gaps = 32/291 (10%) Query: 1 MSVVTVATWNVNSIRA---RIHNLAAW---IKENNPDIICLQET----------KTEDKN 44 MS++ V ++N++ R+ R +L + PD++ LQE + ++ Sbjct: 1 MSLIRVVSYNIHKGRSSLGRHESLNDLRLGLYGLRPDLVFLQEVQGRNETTSMLHAQHES 60 Query: 45 FPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 ++ Y + +G A+LS+Y ++ V D Q + A + Sbjct: 61 LAAALRLNVAYGCNAVRAATDHGNALLSRYDIVDHVNQDISDHRLEQRGLLHARIDVGGT 120 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 + ++L + I+ + + + + + Sbjct: 121 EVHCLVVHLGLFASSRQRQIQALTERIRAEVPDGAPLIIAGDFNDWGDKLAPQFVQQLGL 180 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH----------DTHHLYSFWDYYADS 214 + E+ + L+ + + Y + Sbjct: 181 YEVFSHAPRTSGGELPRLRDSLRRLTAALRGVPGNTVVLERGNQLGMDGTY-CPLPPPRT 239 Query: 215 WSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 + R+D I + SAR+ R W K SDH P++ L++P Sbjct: 240 FPAVFPWFRLDRIY-QRGFA--VRSARVLRG-RQWAKLSDHAPLLTELELP 286 >gi|152982063|ref|YP_001354787.1| endonuclease/exonuclease/phosphatase family protein [Janthinobacterium sp. Marseille] gi|151282140|gb|ABR90550.1| endonuclease/exonuclease/phosphatase family protein [Janthinobacterium sp. Marseille] Length = 264 Score = 55.6 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 39/282 (13%), Positives = 80/282 (28%), Gaps = 43/282 (15%) Query: 4 VTVATWNVN------SIRARIHNLAAWIKENNPDIICLQET----------KTED----- 42 + + T+N++ R RIH L I D++ LQE D Sbjct: 3 LRITTYNIHKGVSSFGSRPRIHALKQAINSMKSDVLFLQEVQGRHDLHALKHATDWPELS 62 Query: 43 -KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI 101 ++F Y + ++G A+LS Y + D + Sbjct: 63 QQDFLAGDSHECAYGMNAVYDHGHHGNALLSCYPILSSRNQNISDHKYESRGILHCVVRA 122 Query: 102 NTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161 + ++L + + I + + + + ++ D + + Sbjct: 123 PEAEVHCFVIHLGLFAGSRKRQTEALIEAVTSSAQKDEPLIIAGDFNDWSNDLSDELRAR 182 Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI 221 + + EN + T + + Sbjct: 183 LGVHEVYDENLVKRGFGTYIRQLAGRGPKIQ--PARTFPAAMPF---------------L 225 Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 R+D I + + SA + W K SDH P++ +L + Sbjct: 226 RLDRIYV-RGF--KVESAEVLHGAI-WAKLSDHAPLVATLRL 263 >gi|150003564|ref|YP_001298308.1| hypothetical protein BVU_0993 [Bacteroides vulgatus ATCC 8482] gi|149931988|gb|ABR38686.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482] Length = 359 Score = 55.6 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 45/271 (16%), Positives = 82/271 (30%), Gaps = 32/271 (11%) Query: 4 VTVATWNV-----NSIRARIHN----LAAWIKENNPDIICLQET----KTEDKNFPFETL 50 + ++N N RA + + +++ +N DIICLQE + K + L Sbjct: 101 IKFLSYNTMAFEKN--RANTKDNPNPVLEYLRNSNADIICLQEYIVGGRLTKKEVDY-AL 157 Query: 51 QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 + Y NG+ S++ I++ P + I +N TL I N Sbjct: 158 RDYPYK-NYHKISGANGLGCYSRFP---ILSAHPVKYASLNNGSIAYKIKVNGDTLLIVN 213 Query: 111 LYLPHGN--PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168 +L Y + + + RL + + + + Sbjct: 214 NHLESNKLTEKDKEVYREMMKDPDKQKVSQGSRLLIGKLAEASAIRAVQADSIARLVAGY 273 Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 + S + + + Y + + RID+I+L Sbjct: 274 KGGGIIVCGDFNDSPISYTHRVVGEGLNDAFVESGNGFGISYNQNHFY----FRIDNILL 329 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 S S +D K SDH P+ Sbjct: 330 SKNLKSY--RCTVDNTI----KSSDHYPIWC 354 >gi|296086676|emb|CBI32311.3| unnamed protein product [Vitis vinifera] Length = 397 Score = 55.6 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 41/253 (16%), Positives = 77/253 (30%), Gaps = 19/253 (7%) Query: 15 RARIHNLAAWIKENNPDIICLQETKTEDKNF-----PFETLQSLNYHIETCGQKSYNGVA 69 R+R + ++E + DI+ LQ+ K E++ +NY + G A Sbjct: 120 RSR-RTVVEVLRELDADILALQDVKAEEEKAMKPLSDLAAALGMNY-VFAESWAPEYGNA 177 Query: 70 ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKIS 129 ILSK+ DD D + + +L H + K + I Sbjct: 178 ILSKWPIKRWKVQKIFDDTDFRNVLKATIDVPQAGEVNFHCTHLDHLDENWRMKQINSII 237 Query: 130 WIKRFLRFASQRLEL-EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN 188 + L +E + + I + ++ + + L+ +Q Sbjct: 238 QSNEGPHILAGGLNSLDETDYSSERWTDIVKYYEEMGKPTPKVEVMKFLKSKQYTDAKDF 297 Query: 189 MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGW 248 G +++ G R+D+I+ SP + Sbjct: 298 AGECESVVMIAKGQ------SVQGTCK---YGTRVDYILASPSSPYKFVPGS--YSVFSS 346 Query: 249 TKPSDHTPVIVSL 261 SDH V V + Sbjct: 347 KGTSDHHIVKVDI 359 >gi|147854417|emb|CAN78583.1| hypothetical protein VITISV_029931 [Vitis vinifera] Length = 1875 Score = 55.6 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 28/244 (11%), Positives = 66/244 (27%), Gaps = 28/244 (11%) Query: 16 ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75 ++ + A I+ D+ CLQETK + GV Sbjct: 750 SKRKVIKAMIRSQKVDLFCLQETKIQ---------------------LMXEGVVRSLGTG 788 Query: 76 PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135 L T+ + +G + + + + Sbjct: 789 RFLEWGALDAHGSAGGVLICWDKRTLELIEMEVGQFSISCRLRNVEDGFVWIFTGVYGPF 848 Query: 136 RFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAI 195 + EE G ++ +N ++ + + + + ++ + + Sbjct: 849 SREEREAFWEELGAIRGIWSDPWCIGGDFNVVLSQRERSSQGRISGAMRRFAQVVDELEL 908 Query: 196 RATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHT 255 ++S+ + + R+D ++S PR SDH Sbjct: 909 LDLPLQGGVFSW----SGGRNNQAWARLDRFLVSQCWLDKCCGVVQCRLPR---PISDHF 961 Query: 256 PVIV 259 P+++ Sbjct: 962 PIML 965 >gi|108803660|ref|YP_643597.1| endonuclease/exonuclease/phosphatase [Rubrobacter xylanophilus DSM 9941] gi|108764903|gb|ABG03785.1| Endonuclease/exonuclease/phosphatase [Rubrobacter xylanophilus DSM 9941] Length = 265 Score = 55.6 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 43/271 (15%), Positives = 73/271 (26%), Gaps = 25/271 (9%) Query: 4 VTVATWNVNS---------IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 + V T+NV R R A ++ PD+I QE LQ N Sbjct: 5 LRVMTFNVRGAYHPDGRNAWRRRRSLNARVVRGAAPDLIGFQE------------LQRAN 52 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 Y + + D D F ++ R + Sbjct: 53 LRFYERELPRYRRLPGPEYENRRPRARNAIFWDPDRLELLESGGFWLSETPERFSRSWGS 112 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 + + L + + G I + P++ D Sbjct: 113 RQVRSANWAVFRVLPSGPDLLHLNTHLDHVSAEARRRGSRLIAGRLEGVRLPVLLTGDFN 172 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 R RA + + +F + + + K RID I++ + Sbjct: 173 CNPGSRTYEVFASAGFADAHRRAGNPPEN--TFHRFMGEGYRSGKEGRIDWILVRDGGRA 230 Query: 235 L--LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + S R+ PSDH PV+ L + Sbjct: 231 RWEVLSCRVVRDCEPPLYPSDHYPVVADLAL 261 >gi|163757064|ref|ZP_02164169.1| hypothetical protein KAOT1_04125 [Kordia algicida OT-1] gi|161322964|gb|EDP94308.1| hypothetical protein KAOT1_04125 [Kordia algicida OT-1] Length = 277 Score = 55.6 bits (132), Expect = 7e-06, Method: Composition-based stats. Identities = 37/283 (13%), Positives = 76/283 (26%), Gaps = 58/283 (20%) Query: 4 VTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQE-----TK-----TEDKN 44 + + ++N+ NS R + IK P ++ +QE K D + Sbjct: 22 LKIMSYNIKLDYPKEGKNSWMNRKPFMVNQIKFYEPTVLGVQEALPNQMKDLDSLLTDYS 81 Query: 45 FP---FETLQSLNYHIETCGQKSYNGV----AILSKYQPIEIVTHLPGDDLDVQARFIEA 97 F + ++ + +K V P ++ + + Sbjct: 82 FVGVGRDDGKNKGEYSAIFYKKDELEVVQSSTFWLSETPEKVSMGWDAVCNRMCTYALFQ 141 Query: 98 TFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII 157 + + G + + + L P+ GD+N+ Sbjct: 142 HTKTKQKFWVFNTHFDHVGK-------EARKNSAVLILNKIKSANTENYPVFLTGDFNME 194 Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK 217 P + D+ + + N + K Sbjct: 195 PNHESIDHITQSLKDSKKIAALDFGPEGTFNGFH-----------------------FDK 231 Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 RID+I +S +H + + PSDH PV++ Sbjct: 232 PVTRRIDYIFVSKHV--KVHKYAVLSDHWNMQYPSDHLPVLIE 272 >gi|156324991|ref|XP_001618531.1| hypothetical protein NEMVEDRAFT_v1g154278 [Nematostella vectensis] gi|156199233|gb|EDO26431.1| predicted protein [Nematostella vectensis] Length = 328 Score = 55.6 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 41/259 (15%), Positives = 79/259 (30%), Gaps = 25/259 (9%) Query: 6 VATWNVNSIRARIHNLAAW--IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + N + +R++ + ++ N DII LQET D+ + L+ N I Sbjct: 4 LVSINSHGLRSQDRRATTFSSLRRNRYDIILLQETHWTDE-IQDDILREWNGDIYFSNGT 62 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 + + + + + + I IT+ Sbjct: 63 NSARGVAILLNPRL-------------DYNLTQTKHDTTGRVINITIELEDQTLCITNIY 109 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + K+F L + I GD+N I + E + Sbjct: 110 APRTDTERKQFYLNLDPYLATKNYNIIGGDFNCITNTRLDKLGGNPDARQTANTE---LY 166 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 TD R + ++ W + + RID M++ T ++ + I Sbjct: 167 TIAAKHDLTDIWRDRNPDTRGFT-WTGRHPTDNTIIRTRIDKFMVNKAMTHVITNTEIKP 225 Query: 244 KPRGWTKPSDHTPVIVSLD 262 SDH + ++LD Sbjct: 226 YA-----HSDHDSITMTLD 239 >gi|125901787|gb|ABN58714.1| pol-like protein [Biomphalaria glabrata] Length = 1222 Score = 55.6 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 38/266 (14%), Positives = 73/266 (27%), Gaps = 46/266 (17%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64 + WN ++A + + P +CLQET F + + +Y T + Sbjct: 4 RIVQWNCRGLKANYEEMQLLMDSETPVAVCLQET------FLKDCISFRSYRAYTKNVED 57 Query: 65 YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124 + + + H + + + +LYLP G P+ T Sbjct: 58 AERASGGVCILVKDSIPHERVELQTTLQAVAAR--ITLHKVITCCSLYLPPGAPLNRTDM 115 Query: 125 DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ 184 +D + + R + LE Sbjct: 116 EDLLKQLPRPYLILGDFNAHNTMW-----------------GSNNTDTRGRMLEDIFLQH 158 Query: 185 KLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK 244 L + + H ++ ID + P + + Sbjct: 159 DLCILN-DASPTYLHPGTGSFTC---------------IDLTVCVPGLLDDFKWS-VSND 201 Query: 245 PRGWTKPSDHTPVIVSLDIPEPRKKQ 270 RG SDH P+I++ ++P + Q Sbjct: 202 LRG----SDHFPIIITNNLPSLGRPQ 223 >gi|115744320|ref|XP_797963.2| PREDICTED: similar to endonuclease-reverse transcriptase [Strongylocentrotus purpuratus] gi|115930783|ref|XP_001183329.1| PREDICTED: similar to endonuclease-reverse transcriptase [Strongylocentrotus purpuratus] Length = 900 Score = 55.6 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 37/280 (13%), Positives = 85/280 (30%), Gaps = 19/280 (6%) Query: 6 VATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + TWNV ++ ++ L +++ ++I + ET Y + ++ Sbjct: 61 IGTWNVRTLNQDGKLDILLNQLEKFKWEVIGVSET---SHWKESGDFTEGGYKVLCASEE 117 Query: 64 S-YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 + L + + T T +++ + + T Sbjct: 118 DVHRRGVALILNKQAQKALLGYNTISPRLISARFQTQTGALTIIQVYAPNMADREEMIDT 177 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 YD I ++ + D++ + E + Sbjct: 178 FYDQLQQTIDDTPNKDILIVQGDLNAKVGRDWDT----WKNVIGHHGYGEMNNRGEKLLN 233 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F N+ + + +++ D +KNK ID +M++ + S + A Sbjct: 234 FCMANNLAIANTMFKQKKASREWTWES--PDGRTKNK---IDFVMVNNKWKSSVQCA--- 285 Query: 243 TKPRGWTKPSDHTPVIVSLDIPEPRKKQQDS-TSQNMKPI 281 SDH VI + + K +Q++ +P+ Sbjct: 286 RSFPSADVASDHQLVICNFKLRFKTKPKQNAIIGGKFRPL 325 >gi|152974192|ref|YP_001373709.1| endonuclease/exonuclease/phosphatase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152022944|gb|ABS20714.1| Endonuclease/exonuclease/phosphatase [Bacillus cytotoxicus NVH 391-98] Length = 263 Score = 55.6 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 39/280 (13%), Positives = 77/280 (27%), Gaps = 37/280 (13%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET----KTED----------KN 44 + V T N +S + +I LA I+E N D+I LQE K + Sbjct: 1 MKVLTLNCHSWQEENQLEKIKYLAKTIQEENYDVIALQEVSQSIKAQSVYGNKKKDNFGL 60 Query: 45 FPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 L+ L + + + + I H + T T+ Sbjct: 61 ILLAELKQLGLENYSMVWDFAHIGYDIYEEGSAIITKHPIIKRGSFFVSESKDTTYWKTR 120 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 + ++ R ++ + D+ + D Sbjct: 121 KIVYATIFYQ-----GKNITFYSCHLGWWNDEEEPFREQVNRFMEHIDDHELSFLMGDFN 175 Query: 165 NPIIWENDAC-FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223 N + + ++ M + WD + +RI Sbjct: 176 NNAHLRGEGYDYMIQNNFYDTYALAMEKDEGTTVQGKIAG----WD------ENKQNLRI 225 Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 D ++ + + S+++ SDH V V L++ Sbjct: 226 DLVLSNKPV--KVFSSKVIFNGMNRKIISDHFGVEVQLNV 263 >gi|229148769|ref|ZP_04277019.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus m1550] gi|228634777|gb|EEK91356.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus m1550] Length = 263 Score = 55.6 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 35/271 (12%), Positives = 63/271 (23%), Gaps = 19/271 (7%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET--KTEDKNFP----FETLQS 52 + + T N +S + +I LA I+E D+I LQE + +N + Sbjct: 1 MKLLTLNCHSWQEENQIEKIKYLAKVIQEEEYDVIALQEVSQSIQAENVCGNKKKDNFGL 60 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 L + + ++ + F + Sbjct: 61 LLLEELKALYVKDYNITWDFSHIGYDVYEEGLAIITKHNIIKEDTFFISENEDTTYWKTR 120 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 I D + + + + Sbjct: 121 KIVSTTIAYNGKDITFYSCHLGWWNDEEESFKGQVDRLMERVDSNKLAFLMGDFNNNARL 180 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 E + WD +RID I+ + Sbjct: 181 EGEGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWD------ENKHNLRIDLILCNQS- 233 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +HS+++ SDH V V LDI Sbjct: 234 -KKVHSSKVIFNGTNRNVISDHFGVEVQLDI 263 >gi|77556470|gb|ABA99266.1| retrotransposon protein, putative, LINE subclass [Oryza sativa Japonica Group] Length = 377 Score = 55.6 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 2/39 (5%) Query: 6 VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTED 42 + +WNV + A + +++ N ++CLQETK +D Sbjct: 267 IVSWNVRGLNAPAKREAVRNLLQQQNATLVCLQETKLQD 305 >gi|315122019|ref|YP_004062508.1| hypothetical protein CKC_01345 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495421|gb|ADR52020.1| hypothetical protein CKC_01345 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 315 Score = 55.6 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 40/288 (13%), Positives = 83/288 (28%), Gaps = 44/288 (15%) Query: 4 VTVATWNVNSI--------------R--ARIHNLAAWIKENNPDIICLQE------TKTE 41 + +A+WN+N++ R A L + + N DI+CLQE K Sbjct: 39 IRIASWNINTLSEKSGMPLLKNSVVREDADYDLLRRYAERLNADIVCLQEMGSYAAIK-- 96 Query: 42 DKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI 101 + FP +T + L + + AI+++ + ++ + Sbjct: 97 -RVFPEDTWEIL--YSGNDSDEHTVHTAIVARKGTVHVLEKSYLSMDTNKLDSKAGKRRS 153 Query: 102 NTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161 + + + + + L + + + I Q Sbjct: 154 VEILFEVNGIKI----WLLDIHLKSFCFVDSLKDAYTLSCYTLNLQVNWLNKW--IHQKK 207 Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI 221 P I D + +L D I S+ + + + Sbjct: 208 RSNIPFIIAGDFNRKINHFGDNDELWGKISKDTILIRVPNKKR-SWCNAHKSIRKREP-- 264 Query: 222 RIDHIMLSPEATSLLHS------ARIDTKPRG-WTKPSDHTPVIVSLD 262 ID ++ A L + I+ + + SDH P+ + Sbjct: 265 -IDFFVMDQNAYKYLIENSYSEVSYIEEDIKKRGYRLSDHCPITTDYN 311 >gi|325912253|ref|ZP_08174650.1| hypothetical protein HMPREF0522_0529 [Lactobacillus iners UPII 143-D] gi|325475912|gb|EGC79081.1| hypothetical protein HMPREF0522_0529 [Lactobacillus iners UPII 143-D] Length = 96 Score = 55.6 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 16/86 (18%), Positives = 32/86 (37%), Gaps = 17/86 (19%) Query: 4 VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDK-------NFP 46 + +WN++S+ A + + IKE NPD++ +QETK + Sbjct: 1 MLFISWNIDSLNAALTGDSDRAHETRSVLNKIKEANPDVVAIQETKLRANGPTKKHCDIL 60 Query: 47 FETLQSLNYHIETCGQKSYNGVAILS 72 + + Y + + + A Sbjct: 61 ADIFEDYQYVWRSSQEPARKSYAGTM 86 >gi|160900882|ref|YP_001566464.1| endonuclease/exonuclease/phosphatase [Delftia acidovorans SPH-1] gi|160366466|gb|ABX38079.1| Endonuclease/exonuclease/phosphatase [Delftia acidovorans SPH-1] Length = 257 Score = 55.6 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 35/270 (12%), Positives = 69/270 (25%), Gaps = 36/270 (13%) Query: 2 SVVTVATWNVN-SI-------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 S++ VAT+N++ + R IHNL +++ + DI+CLQE + Sbjct: 16 SILRVATYNIHKGVQGMGPVRRLEIHNLGHAVEQLDADIVCLQEVR-------------- 61 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 G + + L + Sbjct: 62 ------KMNHKEAAYFERWPQVSQAEYLAPLGYEAVYRTNAYTRHGEHGNALLTRWPVVG 115 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 I+ +++ + + + L + Sbjct: 116 HQHEDISDHRFEQRGLLHVEVEVQNRRVHTIVVHLGLIPGSRVRQVSQLKRFIEREVPPG 175 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 + + ++ L S Y + +DH+ + T Sbjct: 176 APVVVAGDFNDWGGQIKRMLGGFGLYEYDELPSVPTYPSRLPLAQ----LDHVYV-RGLT 230 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 L K R W + SDH P+I + Sbjct: 231 PLGLHV---PKGRIWWRMSDHLPLIAEFRL 257 >gi|110798703|ref|YP_695757.1| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens ATCC 13124] gi|110673350|gb|ABG82337.1| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens ATCC 13124] Length = 262 Score = 55.6 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 47/276 (17%), Positives = 79/276 (28%), Gaps = 28/276 (10%) Query: 1 MSVVTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51 M + V T+N+ N R + IK++ PDII QE + + L Sbjct: 1 MRNLKVMTFNLKYDFKAQDNNEWSQRCLRITKLIKDHLPDIIGTQEGLIHMLDDMDDLLD 60 Query: 52 SLNY---HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108 ++ E G+ +N + L + + ++ ++ Sbjct: 61 EYSWVGEDREGNGKDEFNAIFFLKNKFEVLEWNQFWLSKTPNIKGSKDFNSSLPRICTKL 120 Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL-EEPLIFAGDYNIIPQPHDCYNPI 167 G I L+ ++ II +CY Sbjct: 121 KLKDKISGLKIDIYNTHLDHESELAREEGIKIILKEVKKNYKIYKTPYIIMGDFNCYLED 180 Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227 N F + + + H Y G ID+I+ Sbjct: 181 NIFNIIREEETNNTCFNVCYDNIKNNILGTFHYFKGGY-------------DGRIIDYIL 227 Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 S E + S ID + PSDH PVI L++ Sbjct: 228 YSKECE--IKSLNIDDRKINGGYPSDHYPVICELEL 261 >gi|147843817|emb|CAN83725.1| hypothetical protein VITISV_037053 [Vitis vinifera] Length = 1726 Score = 55.6 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 40/260 (15%), Positives = 81/260 (31%), Gaps = 35/260 (13%) Query: 5 TVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WN + +R + ++ NPD++ LQETK + Sbjct: 725 KILSWNTRGLGSRKKRRTVRRFLSTQNPDVVMLQETK--------REIWDRRXVSSVWKG 776 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 KS + VA+ + I L +F + + ++ + G ++ Sbjct: 777 KSLDWVALPACGASGGI------VILWDSXKFXCSEKVLGXFSVTVKLNSXEEGFFWLTS 830 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFA--GDYNIIPQPHDCYNPIIWENDACFTLEVR 180 Y + ++ Q L + GD+N+I + + + E Sbjct: 831 VYGPNKAVXRKDFWMELQDLHGLTSPRWCVGGDFNVIKRMSERMGDSRLTVNMRCFDEFI 890 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + + +++ + D K R+D + S E S Sbjct: 891 ----------KESGLLDPPLRNAAFTWSNMQVDPICK----RLDRFLFSSEW-DSFFSQS 935 Query: 241 IDTKPRGWTKPSDHTPVIVS 260 I WT SDH+ + + Sbjct: 936 IQEALPRWT--SDHSLICLE 953 >gi|329965398|ref|ZP_08302322.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides fluxus YIT 12057] gi|328522190|gb|EGF49304.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides fluxus YIT 12057] Length = 361 Score = 55.6 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 44/271 (16%), Positives = 84/271 (30%), Gaps = 25/271 (9%) Query: 4 VTVATWNVNSIRARI-----HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 + +AT+NV++ I +A ++++ + DI+CLQE ++ F ++++ H Sbjct: 104 LKIATYNVHNFGDEITGYSCKEMARYMQQEHVDILCLQEF-GNNRYFTADSIRKALSHWP 162 Query: 59 TCGQKSYNG------VAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 + +A+ S+Y I + T + L Sbjct: 163 HVLTLQEDSLRKVLPIAVFSRYPLIHERFITYPQSANCSMLCDIVAGTDTVRLLNSHLQT 222 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 + + +R +R A E + N Sbjct: 223 TSVSQKRGKWQREMASDDARREIRAAKDAAETLHGNFVKRTLQTYTVGYFAKNSPYPVIV 282 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 + S+ GF T ++Y++ K +RID+I S E Sbjct: 283 CGDFNSLPSSYTYQYFSGFLKDGFRTAGNGYMYTY-------RYGKKMLRIDYIFHSNEL 335 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + SDH PVI+ + I Sbjct: 336 E------GMSYYSPTQEFCSDHNPVIMEMKI 360 >gi|145516224|ref|XP_001444006.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124411406|emb|CAK76609.1| unnamed protein product [Paramecium tetraurelia] Length = 347 Score = 55.6 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 33/269 (12%), Positives = 70/269 (26%), Gaps = 23/269 (8%) Query: 4 VTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKT-EDKNFPFETLQSL 53 + V T+N+ N R + I++ NP+I LQE + + + Sbjct: 92 LKVMTFNIRYDCKEDGKNDWNHRKSVVYKLIRKINPEIFGLQEVLAHQQADLQSNLQGNY 151 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 N+ ++ Y ++ ++ + + RI Sbjct: 152 NFIGRGRQNNFWDDEGCPIYYDMLKYNIVQAEVFWFSDTPYVAGSKSYGNGFPRICTYVK 211 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + + + E + I P+ + Sbjct: 212 LLHKMSQKVFHVYNTHFDHENKLSQIKSAEQIKRHI---QQYCSPEDKIIVMGDLNSLPM 268 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 +++ S +++++ G+ ID+I L Sbjct: 269 SDAVKILTSPIWQGFTLQNTMGVLDMPLATMHAWY-------GLKLGLHIDYIFLGNL-- 319 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 S I PSDH P +V + Sbjct: 320 -KYKSMMIVNDLIDGQYPSDHFPKVVVYE 347 >gi|300705174|ref|YP_003746777.1| metal dependent endonuclease/phosphatase [Ralstonia solanacearum CFBP2957] gi|299072838|emb|CBJ44194.1| putative metal dependent endonuclease/phosphatase [Ralstonia solanacearum CFBP2957] Length = 248 Score = 55.6 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 36/276 (13%), Positives = 83/276 (30%), Gaps = 46/276 (16%) Query: 1 MSVVTVATWNVN----SI--RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 M + VAT+N++ I R R+H++ + + DI+ LQE + + L + Sbjct: 1 MLRLRVATYNIHKGVTGIARRVRVHDVRQGLHTMDADIVFLQEVQDRNDRLVAAELFDPS 60 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 Y + Y + D + + ++ L I + Sbjct: 61 Y--------TQLRYLATDVYPHTVYGRNAVYDHGHHGNAIMSRYPILLSENLDISDHRFE 112 Query: 115 HGNPITSTKY--DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD---CYNPIIW 169 + + ++ + ++ + + + +++P + W Sbjct: 113 QRGLLHAVTDLGFGEVHLLCAHFGLFARSRQRQAEALIERVRSVVPTDAPLVVAGDFNDW 172 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 N + ++ + T +H + +R+D I Sbjct: 173 NNRLDRVICQALGATEVADKAAGARPLRTFPSHLPW---------------LRLDRIY-- 215 Query: 230 PEATSLLHSARIDTKP----RGWTKPSDHTPVIVSL 261 + I+ R W + SDH P++ L Sbjct: 216 ------VRGFDIERAHALTGRDWAQRSDHVPLLAEL 245 >gi|284029915|ref|YP_003379846.1| endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836] gi|283809208|gb|ADB31047.1| Endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836] Length = 258 Score = 55.6 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 41/271 (15%), Positives = 71/271 (26%), Gaps = 34/271 (12%) Query: 4 VTVATWNVNS-----IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS-LNYHI 57 V + TWNV R R + A ++ PD++ +QE + + + L + L H Sbjct: 10 VRLMTWNVWGRFGDRWREREDAIVAVVRSLQPDLVAVQEAWSTPETTQADVLGARLGLHA 69 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 + E+ L A T L I Sbjct: 70 AFAKSRMPTD-------ADPEVELGLAVLSRWPLAAVQRHHVRGETVALHIEPAAPGPRV 122 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 +T D ++ L+ + D ++ P E Sbjct: 123 DFVTTCLD-WEEDHAEQRMAQAKVLDELVRDLTTRDGLVVLAGDLNAPPDHPEISLLTER 181 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 + + W ++ RID+I+ + L Sbjct: 182 MTDCWSGRADAGHTYSSGNPYLGHGE-----------WIEDH--RIDYILATHRDPHRLQ 228 Query: 238 SARIDTKPRG-----WTKPSDHTPVIVSLDI 263 +D RG PSDH V + + Sbjct: 229 --VLDAGIRGLTEDNGLPPSDHYAVFADVAL 257 >gi|56478194|ref|YP_159783.1| putative endonuclease / exonuclease / phosphatase [Aromatoleum aromaticum EbN1] gi|56314237|emb|CAI08882.1| conserved hypothetical protein, putative endonuclease / exonuclease / phosphatase [Aromatoleum aromaticum EbN1] Length = 284 Score = 55.6 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 38/301 (12%), Positives = 79/301 (26%), Gaps = 61/301 (20%) Query: 4 VTVATWNV------NSIRARIHNLAAWIKEN-NPDIICLQETKTEDKNFPFETLQSLNYH 56 + + +WN+ + R + A I + + ++ICLQE +NFP Sbjct: 1 MRIVSWNIQWGRGADG-RVDLERTVAAIHDIGDAEVICLQEV---AQNFPGLE------- 49 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 G + VAIL+ P + G D+ A + L +G ++ Sbjct: 50 ----GGDCEDEVAILAAAFPGHEAMYGAGIDVPDGAGGRARFGNLMLSRLEVGPVFRHLL 105 Query: 117 NPITSTKYDDKISWIKR---FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + R+ ++ Sbjct: 106 PCPADPGQAAMQRCCVEAVLQAPWGPVRVLTTHLEYYSARQRAAQVAMLRALQKEVAGQV 165 Query: 174 CFTLEVRQSFQKLQNMGFTDAI-----RATHDTHHLYS------------FWD-----YY 211 R++ Y+ + D + Sbjct: 166 AAGPAGREASPAFAAGRRPVTAVACGDFNCEPGSGAYTLMSADIALHVPPWRDAWRVKHR 225 Query: 212 ADSWSKNKGI-------RI---DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + + G+ R D+ +S + + + + T SDH P+++ L Sbjct: 226 SRAHDPTVGLHGAEWPGRTYCCDYAWVSDDLAARVAQVEVY----AATPASDHQPLVLEL 281 Query: 262 D 262 + Sbjct: 282 N 282 >gi|83746623|ref|ZP_00943673.1| dioxygenase [Ralstonia solanacearum UW551] gi|207727912|ref|YP_002256306.1| endonuclease/exonuclease/phosphatase protein [Ralstonia solanacearum MolK2] gi|207742318|ref|YP_002258710.1| endonuclease/exonuclease/phosphatase protein [Ralstonia solanacearum IPO1609] gi|83726757|gb|EAP73885.1| dioxygenase [Ralstonia solanacearum UW551] gi|206591154|emb|CAQ56766.1| endonuclease/exonuclease/phosphatase protein [Ralstonia solanacearum MolK2] gi|206593706|emb|CAQ60633.1| endonuclease/exonuclease/phosphatase protein [Ralstonia solanacearum IPO1609] Length = 248 Score = 55.6 bits (132), Expect = 8e-06, Method: Composition-based stats. Identities = 36/276 (13%), Positives = 83/276 (30%), Gaps = 46/276 (16%) Query: 1 MSVVTVATWNVN----SI--RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 M + VAT+N++ I R R+H++ + + DI+ LQE + + L + Sbjct: 1 MLRLRVATYNIHKGVTGIARRVRVHDVRQGLHTMDADIVFLQEVQDRNDRLVAAELFDPS 60 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 Y + Y + D + + ++ L I + Sbjct: 61 Y--------TQLRYLATDVYPHTVYGRNAVYDHGHHGNAIMSRYPILLSENLDISDHRFE 112 Query: 115 HGNPITSTKY--DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD---CYNPIIW 169 + + ++ + ++ + + + +++P + W Sbjct: 113 QRGLLHAVTDLGFGEVHLLCAHFGLFARSRQRQAEALIERVRSVVPTDVPLVVAGDFNDW 172 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 N + ++ + T +H + +R+D I Sbjct: 173 NNRLDRVICQALGATEVADKAAGARPLRTFPSHLPW---------------LRLDRIY-- 215 Query: 230 PEATSLLHSARIDTKP----RGWTKPSDHTPVIVSL 261 + I+ R W + SDH P++ L Sbjct: 216 ------VRGFDIERAHALTGRDWAQRSDHVPLLAEL 245 >gi|187922295|ref|YP_001893937.1| endonuclease/exonuclease/phosphatase [Burkholderia phytofirmans PsJN] gi|187713489|gb|ACD14713.1| Endonuclease/exonuclease/phosphatase [Burkholderia phytofirmans PsJN] Length = 268 Score = 55.6 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 37/278 (13%), Positives = 79/278 (28%), Gaps = 25/278 (8%) Query: 1 MSVVTVATWNVNSIRARIHNLAA--------WIKENNPDIICLQETKTEDKNFPFETLQS 52 M+ +TV T+N + A I + PD+ +QE K D N L + Sbjct: 1 MTTLTVLTYNT--LFAGRDGGDDRRAQAQVGLINDLRPDVFLMQEAKGFDAN-GGAWLHA 57 Query: 53 LNYHIETCGQ-----KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107 L I G ++ +AI + + G + + + + Sbjct: 58 LEQQIAMRGFLAVAPRTGQNIAIFIREPLRPLGFEADGANFHHTLATLRVAVPGSELPVT 117 Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167 + +L P + ++ R + + Sbjct: 118 FISAHLCPNGPEIRRREAAYLAVHAAPERLTLVTGDFNSASPHDSE---PEDWAALAPHH 174 Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWD--YYADSWSKNKGIRIDH 225 A + +S + D + + Y ++ +R D+ Sbjct: 175 RARYVADDLQGIDRSVLAHLEAAGWVDLGQELDAAGVPTVPTAAYRDAEFAT---MRCDY 231 Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 ++ S + S ++ SDH PV+ + ++ Sbjct: 232 LLASSGLAAKARSYQVIRNSI-TDTASDHYPVLATFEL 268 >gi|291515221|emb|CBK64431.1| Metal-dependent hydrolase [Alistipes shahii WAL 8301] Length = 306 Score = 55.6 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 35/268 (13%), Positives = 75/268 (27%), Gaps = 26/268 (9%) Query: 4 VTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 + V ++NV NS R + A + P ++ +QE + + K + E Sbjct: 54 LRVMSFNVRYSSGDDGANSWDNRKKAVPAMFADQQPTVLGVQEARLDQKTYMDE--NCAG 111 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 Y G+ + L + + + + Sbjct: 112 YKSVGVGRTDGQNAGEFMAIYYLADAVKLEKWGTFWLSDTPDVPSVGWDASTYRTATWAL 171 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 + + K+ + + Q + + + + N Sbjct: 172 FTHYKSGRKFFYVNT----HIDHVGQVAAQKSMELIEAKIRSLNPDNQPTVLTADFNKML 227 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 + + + + T + + ++ + + N RIDHI S T Sbjct: 228 DSPIFDGVKKFMADARTTAPVTDNKAS------FNNFGGA--TNYP-RIDHIF-SSGFTP 277 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 L A +D + SDH P+ L+ Sbjct: 278 -LRFATVDQRYEKVPYISDHYPIAAVLE 304 >gi|209547425|ref|YP_002279343.1| endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209538669|gb|ACI58603.1| Endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 242 Score = 55.6 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 40/272 (14%), Positives = 78/272 (28%), Gaps = 52/272 (19%) Query: 4 VTVATWNVNS-IRARIH----NLAAWIKENNPDIICLQETKT---------EDKNFPFET 49 + + T+NV+S I + +A+ I E DI+ LQE + Sbjct: 6 IRLLTYNVHSCIGSDRKLDPGRIASVIAEAQADIVALQEVDVLRRRTGGIDQAHMIASLL 65 Query: 50 LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 ++H + G AI++ + + + + + L + Sbjct: 66 EMQAHFHPALSVAEEQYGDAIITALPTGAVKAGPLPSIGEQRGAISVEILVGDRKLLVVN 125 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 G + + + P I GD+N IP Sbjct: 126 THLGLRGRER------MRQMTTLLNAGWLRGTADEPLPTILCGDFNAIPSSATYRLAARS 179 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 DA Q+ N A + +R+DH+ ++ Sbjct: 180 LKDA----------QRAGNARPRATFPARYPL-------------------MRLDHVFVT 210 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + + A + + R SDH P++ + Sbjct: 211 DDLI--VKQATVL-ENRLARVASDHLPLLAEI 239 >gi|327191270|gb|EGE58313.1| putative phosphatase protein [Rhizobium etli CNPAF512] Length = 659 Score = 55.6 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 42/302 (13%), Positives = 81/302 (26%), Gaps = 58/302 (19%) Query: 3 VVTVATWNVN---SI--RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL---- 53 +V A++N+ + R + +A + D+I LQE + F + Sbjct: 371 IVNFASYNIQYGFGLDGRYDLPRIARSL--EGADVIALQEV---TRGFSRNGFADMAADI 425 Query: 54 -----NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108 +Y + A P+ + G+ + + + ++ + Sbjct: 426 AALFPDYFWVYGPACDLHVEAPEGVLSPVRGIRFQFGNMVLSRWPIASTRTLLLPRSRTL 485 Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFA---------------SQRLELEEPLIFAGD 153 G + G + + E G Sbjct: 486 GKINPQRGATEAVINAPGGAIRVYSVHLDHVSPDERIRQLQFLNAQINAFVREGGSLTGA 545 Query: 154 YNIIPQPHDCYNPIIWENDACFTLE--VRQSFQKLQNMGFTDAIRATHD----------T 201 + D E + + R Sbjct: 546 AEFDLPEPPLPEDYVILGDFNMEPESPEYCALAGAAGGYYGRVARIGTPVDAFAALEAYR 605 Query: 202 HHLYSFWDYYADSWSKNKGIR--IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 YS+ + ++ G R +D+ +S S L SARIDT+ +G SDH P+ V Sbjct: 606 PESYSWMN------PEDHGERMHLDYCFVSCGLVSRLQSARIDTQSQG----SDHFPLWV 655 Query: 260 SL 261 + Sbjct: 656 EI 657 >gi|319949616|ref|ZP_08023657.1| hypothetical protein ES5_09158 [Dietzia cinnamea P4] gi|319436722|gb|EFV91801.1| hypothetical protein ES5_09158 [Dietzia cinnamea P4] Length = 319 Score = 55.6 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 36/266 (13%), Positives = 67/266 (25%), Gaps = 30/266 (11%) Query: 6 VATWNV------------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFP--FETLQ 51 V TWN+ + R R + A + P ++C QE + P + L Sbjct: 40 VMTWNIRRPVPAALTRAADRWRHRAPRVRALLASERPTVLCAQEV--VAEQIPTVLDGLG 97 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 + H+ G A Y + + + R+ Sbjct: 98 PGHDHVGRGRSADGGGEACPVFYDATRLELLGWEQSALSDTPHRAGSVSWGNLFPRVMVE 157 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 R + ++ A + Sbjct: 158 VHLRDRITGHELLVVNTHLDPLSARSRLRSARALLEVVAARGLPAVVTGDLNAGSSSPAV 217 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 + ++ ++ ++ DY + G RID I+ +P+ Sbjct: 218 RVLLSDGTLVDSWRVARARHSEQWG---------TYADYR---RPRRDGARIDWILTTPD 265 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPV 257 T + A I+ PSDH V Sbjct: 266 LT--VTDAAINPLRHEGGWPSDHLAV 289 >gi|282859926|ref|ZP_06269014.1| endonuclease/exonuclease/phosphatase family protein [Prevotella bivia JCVIHMP010] gi|282587329|gb|EFB92546.1| endonuclease/exonuclease/phosphatase family protein [Prevotella bivia JCVIHMP010] Length = 384 Score = 55.6 bits (132), Expect = 9e-06, Method: Composition-based stats. Identities = 39/267 (14%), Positives = 76/267 (28%), Gaps = 24/267 (8%) Query: 4 VTVATWNV------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFP--FETLQSLNY 55 + + ++NV + + +++ +A +I + DI+CLQE K E P TL+ +Y Sbjct: 119 IKILSYNVYLFDTWDDVEGKLNPIADYIIRSKADIVCLQEAKIETAKKPNIMHTLRK-HY 177 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 K +G + I++ + +N + N + Sbjct: 178 KYIDRMVKRNSGDDNMVLLSKFPILSRDSIPYSSHSNMSVAYMLDVNGTKTLLVNNHFES 237 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDY--NIIPQPHDCYNPIIWENDA 173 K + ++ + + + Sbjct: 238 YGLTEEEKTSFTEMVDGKVAVKKAKGKSVSLIDKLGKTMMRRAPQVDAVAAYVKKYLDKG 297 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG---IRIDHIMLSP 230 + + D++ +S NK RIDHI S Sbjct: 298 TPVILCGDFNDTPISYSHDVINGLLTDSYAS----SGNGLGFSYNKSKMYFRIDHIFASS 353 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPV 257 E A++D SDH P+ Sbjct: 354 EFEPY--GAKVDKSI----NNSDHYPI 374 >gi|315654118|ref|ZP_07907034.1| exodeoxyribonuclease [Lactobacillus iners ATCC 55195] gi|315488814|gb|EFU78460.1| exodeoxyribonuclease [Lactobacillus iners ATCC 55195] Length = 96 Score = 55.2 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 34/96 (35%), Gaps = 17/96 (17%) Query: 4 VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDK-------NFP 46 + +WN++S+ A + + IKE NPD++ +QETK + Sbjct: 1 MLFISWNIDSLNAALTGDSDRAHETRSVLNKIKEANPDVVAIQETKLRANGPTKKHCDIL 60 Query: 47 FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTH 82 + + Y + + + A I+ Sbjct: 61 ADIFEDYQYVWRSSQEPARKSYAGTMFLYKKIIIHR 96 >gi|313202112|ref|YP_004040770.1| endonuclease/exonuclease/phosphatase [Methylovorus sp. MP688] gi|312441428|gb|ADQ85534.1| Endonuclease/exonuclease/phosphatase [Methylovorus sp. MP688] Length = 250 Score = 55.2 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 34/268 (12%), Positives = 73/268 (27%), Gaps = 27/268 (10%) Query: 1 MSVVTVATWNVN-SI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 + + VAT+N++ + R +H+ I+ D++ LQE +D++ Sbjct: 2 LPTLRVATFNIHKGLTSFNARLALHDQREMIRNLQADVVFLQEV--QDEH------HGNG 53 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 + + + + + + T I + Sbjct: 54 LRFKHWPAAGQTHFLAEACGPNYAYGKNAVYPGGHHGNAVLSRFPILQSTTHDISAHEIE 113 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 + + + L F + I P++ D Sbjct: 114 QRGLLHCEIAIEGWPQTLHCICVHLGLLARWRFKQFGALRDYIHAVIPEDAPLVIAGD-- 171 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 F + ++ + + SF + R+D I + Sbjct: 172 FNDWRLSAGHQVMDGLNMREVFEHAHGKPARSFPSMFPL-------FRLDRIYVRGF--- 221 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 +HSA + PR SDH + L+ Sbjct: 222 NIHSAHVHGGPRTALT-SDHAALSAVLE 248 >gi|148908559|gb|ABR17389.1| unknown [Picea sitchensis] Length = 303 Score = 55.2 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 4/42 (9%) Query: 4 VTVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTE 41 + +WN NS+ R+ LA +++ +PD+I +QE + Sbjct: 53 LKFMSWNANSLLLRLKKNRTELADFVQRLDPDVIAIQEVRIP 94 >gi|147812154|emb|CAN60035.1| hypothetical protein VITISV_015752 [Vitis vinifera] Length = 1762 Score = 55.2 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 7/38 (18%), Positives = 21/38 (55%), Gaps = 2/38 (5%) Query: 4 VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETK 39 + + +WN + ++ + +++ PB++ +QETK Sbjct: 819 MKIISWNTRGLGSKXKRRVVKDFLRSEKPBVVMIQETK 856 >gi|254504971|ref|ZP_05117122.1| endonuclease/exonuclease/phosphatase family [Labrenzia alexandrii DFL-11] gi|222441042|gb|EEE47721.1| endonuclease/exonuclease/phosphatase family [Labrenzia alexandrii DFL-11] Length = 361 Score = 55.2 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 39/275 (14%), Positives = 73/275 (26%), Gaps = 37/275 (13%) Query: 4 VTVATWNVNSIRARIHNLA-------AWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56 + + + N + L ++KE +PDII QET LQ +H Sbjct: 113 IKIVSIN-------LEALFLGDLVLTGYLKEADPDIIVFQET--------LWNLQKWRWH 157 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 N ++ + ++ + + Sbjct: 158 QRGLPIGGPNTSVYPEHLLVGDLGELVIFSRFPIEDTSSLVIPGVTPPGASVHYNADREI 217 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH--DCYNPIIWENDAC 174 + + + + + + + P+I D Sbjct: 218 LSFSINIEGQTVDLVSVHSDSPRTARRWQNKRAYFDKMDAVIAERLESDATPLIAIGDWN 277 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 + + L+ A Y F+DY +R I+ SP Sbjct: 278 SAPWSARFQRSLEANDLATAYPDGIPQVTRY-FFDYR---------LR--WILGSPVDQV 325 Query: 235 LL-HSARIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268 + I G SDH P++V+L +PE K Sbjct: 326 AVSKDIGIVDVSLGPHIGSDHRPLLVTLQLPEQAK 360 >gi|119897710|ref|YP_932923.1| hypothetical protein azo1419 [Azoarcus sp. BH72] gi|119670123|emb|CAL94036.1| conserved hypothetical protein [Azoarcus sp. BH72] Length = 283 Score = 55.2 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 47/301 (15%), Positives = 87/301 (28%), Gaps = 63/301 (20%) Query: 4 VTVATWNV------NSI-RARIHNLAAWIKENNP----DIICLQETKTEDKNFP------ 46 + + +WN+ + + R LA I+ D+ICLQE ++FP Sbjct: 1 MRIVSWNIQWGRGADGVVR-----LARTIEALRALGELDVICLQEV---AEHFPGLPGGE 52 Query: 47 --------FETLQSLNYHIET---------CGQKSYNGVAILSKYQPIEIVTH-----LP 84 E Y G ++ G +LS+ + H Sbjct: 53 AGDEPRQLAEAFP--GYEAVFGAAVDVPGAGGGRARFGNLLLSRLPLGAVFRHLLPAPPD 110 Query: 85 GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL 144 +Q +EA LR+ +L + +P + ++ + A+ Sbjct: 111 PGRPSMQRVCVEAVVQAPFGDLRVMTTHLEYYSPRQRAAQVQALRTLQHDVAAAALLPPA 170 Query: 145 EEPLIFAGDYNIIPQPHDCYNPIIWE----NDACFTLEVRQSFQKLQNMGFTDAIRATHD 200 + A P E A + + ++ A H Sbjct: 171 GKEGNPAFAARARPAAAVLCGDFNCEPGSVEHAALCADAAVAGAAFRDCWTVLHGAAPHP 230 Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 + ++ D + S + S +I T+ T SDH PV++ Sbjct: 231 PSVG------LHGAEWPDRPYCCDFVFASEGLVPRVRSLQIVTE----TAASDHQPVLLE 280 Query: 261 L 261 L Sbjct: 281 L 281 >gi|116249399|ref|YP_765240.1| hypothetical protein pRL120737 [Rhizobium leguminosarum bv. viciae 3841] gi|115254049|emb|CAK12446.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae 3841] Length = 242 Score = 55.2 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 38/272 (13%), Positives = 74/272 (27%), Gaps = 52/272 (19%) Query: 4 VTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQETKT---------EDKNFPFET 49 + + T+NV+S + +A+ I E DI+ LQE + Sbjct: 6 IKLLTYNVHSCIGGDRKLDPGRIASVIAEAEADIVALQEVDVLRRRTGGVDQAHAIASLL 65 Query: 50 LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 ++H + G AI++ + + + N + L + Sbjct: 66 KMQAHFHPALSIAEEQYGDAIITSLPTGAVKAGPLPSIGEQRGAISVEILVGNRKLLVVN 125 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 G + + + P I GD+N IP Sbjct: 126 THLGLRGRER------IRQMTTLLNPGWLRGTADEPLPTILCGDFNAIPSSATYRLAARS 179 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 D Q + + +R+DHI ++ Sbjct: 180 LKDV----------QLAGGAAPRATFPSRYPL-------------------MRLDHIFVT 210 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + + A + + R SDH P++ + Sbjct: 211 DDLI--VKKAAVL-ENRLTRIASDHLPLLAEI 239 >gi|296198965|ref|XP_002747038.1| PREDICTED: sphingomyelin phosphodiesterase 2 [Callithrix jacchus] Length = 422 Score = 55.2 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 41/301 (13%), Positives = 89/301 (29%), Gaps = 45/301 (14%) Query: 4 VTVATWNVNSI------RA-RIHNLAAWIKENNPDIICLQETKT-EDKNFPFETLQS-LN 54 + + N I R R+ L ++ + + D+ L+E + +D + + L Sbjct: 9 LRIFNLNCWGIPYLSKHRTDRMKRLGDFLNKESFDLALLEEVWSEQDFQYLRQKLSPTYP 68 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN---- 110 +G+ + SK+ E+ H+ + F+ L + + Sbjct: 69 AAHHFRSGIIGSGLCVFSKHPIQELTQHVYTLNGYPYMIHHGDWFSGKAVGLLVLHLRGV 128 Query: 111 -------LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 N +++ + +F + + ++ GD N+ P+ C Sbjct: 129 VLNAYVTHLHAEYNRRKDIYLAHRVAQVWELAQFIHHTSKKADVVLLCGDLNMHPEDLGC 188 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223 W LE + + + GIRI Sbjct: 189 CLLKEWTGLRDAYLETQDFKGSEEGSTMVPKNCYVNQQEL-----------KPFPFGIRI 237 Query: 224 DHIMLSPEATSLLHSARID---------TKPRGWTKPSDHTPVIVSLDIPEPRKKQQDST 274 D++ + I P T SDH ++ +L + + +Q S+ Sbjct: 238 DYV-----LYKAVSGFYIYCKSLETTTGYDPHSGTPLSDHEALMATLCVRQSPPQQNPSS 292 Query: 275 S 275 + Sbjct: 293 T 293 >gi|291395719|ref|XP_002714202.1| PREDICTED: TRAF and TNF receptor-associated protein [Oryctolagus cuniculus] Length = 347 Score = 55.2 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 46/285 (16%), Positives = 80/285 (28%), Gaps = 59/285 (20%) Query: 2 SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 S+ + TWN++ + RAR + ++I +PD++ LQE P Sbjct: 97 SMFSCITWNIDGLDLNHLQERAR--GVCSYIALYSPDVVFLQEV------IPP------- 141 Query: 55 YHIETCGQKSYNGVAI-LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 Y + S + + I+ L Q + L + Sbjct: 142 YCSYIKKRASSYEIITGHEEGYFTAIMLKKSRVKLKSQEIIPFPNTKMMRNLLCVHASVS 201 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + + ++ + + LE Q +I+ D Sbjct: 202 GNELYLMTSHLESTRGHATERMNQLKMVLE-------------KIQEAPESATVIFAGDT 248 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG------IRIDHIM 227 + L + H Y+ WD +S N G +R D I Sbjct: 249 NLRDQEVAKCGGLPSNILDVWEFLGKPKHCQYT-WDTQMNS---NLGISATCKLRFDRIF 304 Query: 228 LSPEATSLLHSARIDT---KPRGWTK------PSDHTPVIVSLDI 263 + I G K PSDH ++ +LDI Sbjct: 305 ----FRAAAEEGHIIPRSLDLLGLEKLDCGRFPSDHWGLLCNLDI 345 >gi|296875948|ref|ZP_06900007.1| RgfB protein [Streptococcus parasanguinis ATCC 15912] gi|296433023|gb|EFH18811.1| RgfB protein [Streptococcus parasanguinis ATCC 15912] Length = 270 Score = 55.2 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 36/275 (13%), Positives = 76/275 (27%), Gaps = 20/275 (7%) Query: 4 VTVATWNVNSI---RARIH--NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 + T N +S A+ L I E D+IC QE ++ ET+++ Y+ Sbjct: 1 MKFLTLNSHSWMEENAQQKFETLKEQILEAQYDVICFQEV---NQEMASETVETDEYYQA 57 Query: 59 ----------TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108 +A + + G D + + + + + + Sbjct: 58 APSAVAIHKDHFVHVLVEELAAQGLHYYWTWAYNHIGYDHLNEGVAVLSRQPLKADEILV 117 Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168 N+ P K + + ++ F I+ Sbjct: 118 SNMDDPTDYHTRRVAVAHTSVDGKEIVVGSVHLSWWDKGFQFEWPRIEKYFNQVEKPFIL 177 Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 + + ++ D+ +T Y+ +RID++ Sbjct: 178 AGDFNNPAGQEGYETILSSSLKLQDSFIEAKETKGTYTVGPGIDGWTDNQVPLRIDYVFA 237 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 SPE + + + SDH + L + Sbjct: 238 SPEWE--IKRLHVIFDGQNKPLVSDHYGLEAELSL 270 >gi|229495328|ref|ZP_04389063.1| AP endonuclease domain protein [Porphyromonas endodontalis ATCC 35406] gi|229317771|gb|EEN83669.1| AP endonuclease domain protein [Porphyromonas endodontalis ATCC 35406] Length = 402 Score = 55.2 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 43/252 (17%), Positives = 73/252 (28%), Gaps = 26/252 (10%) Query: 22 AAWIKENNPDIICLQETKTEDKNFPF-------ETLQSLNYHIETCGQKSYNGVAILSKY 74 +IK+++ DI+CLQE + P+ E L Y + L Sbjct: 166 LRYIKDSHADIVCLQEAAIMRDDSPYVSAKKITEYLPEYPY--VVTRYAQGDRGTSLMLL 223 Query: 75 QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRF 134 + I T + + L + NL+L T + Sbjct: 224 SKFPVRNTRMLPLESTFNGGIAYTLDVAGRELTVFNLHLESFRLTTEDGTRYARLAREIE 283 Query: 135 LRFASQRLELEEPLIFAGDYNII---PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191 +++E + F F + G Sbjct: 284 AVALKEQMEQKLGPAFLKRAKQADRVHVEIIHEKTPYILVCGDFNDTPISYAHQRIASGL 343 Query: 192 TDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP 251 DA +T YSF ++ + G RIDHI+ S S + ++D Sbjct: 344 IDAYASTG-CGTGYSF------TFKR-LGFRIDHILHSRRVKSY--NCKVDKSAT----I 389 Query: 252 SDHTPVIVSLDI 263 SDH P+ + + Sbjct: 390 SDHKPLSCFISL 401 >gi|309812653|ref|ZP_07706397.1| endonuclease/exonuclease/phosphatase family protein [Dermacoccus sp. Ellin185] gi|308433348|gb|EFP57236.1| endonuclease/exonuclease/phosphatase family protein [Dermacoccus sp. Ellin185] Length = 226 Score = 55.2 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 31/266 (11%), Positives = 61/266 (22%), Gaps = 52/266 (19%) Query: 1 MSVVTVATWNVNSI---RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57 M+ + ++NV + RA L I+ PD++CLQE P Sbjct: 1 MTT-RLMSYNVRGLKDDRAA---LLRVIRHAAPDVLCLQE-------MPRHPFSD----- 44 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 + +A ++ + + L Sbjct: 45 --------HRIAEFAESVGLVWGGGNRHRMSTAIVTAPRLDVAASGHGLYTVPRPQEPRG 96 Query: 118 --PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + + D N+ E + Sbjct: 97 YAWAEVCLPGEAKWLAISTHLSLYSSMRAGHARELIADPNLPGDVPWAIAGDFNELENGP 156 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT-S 234 ++ + + A RID + SP T Sbjct: 157 AGREFKAHGLVDAGPRINTFNAAEPHK-------------------RIDFVYASPSLTLE 197 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVS 260 + + ++ T +DH P++V Sbjct: 198 TVDMSAVEHD---MTVATDHRPLVVD 220 >gi|254823077|ref|ZP_05228078.1| hypothetical protein MintA_24325 [Mycobacterium intracellulare ATCC 13950] Length = 254 Score = 55.2 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 32/266 (12%), Positives = 74/266 (27%), Gaps = 23/266 (8%) Query: 4 VTVATWNV-------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56 + VAT+N+ + + L ++ +PD++ LQE + L + Sbjct: 1 MRVATFNILHGRTVGDGVDVA--RLRDCVRRLDPDVLSLQEVDCDQPRSERADLTAAAAE 58 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL-RIGNLYLPH 115 + + + T + + + + + + R+ + + Sbjct: 59 AMGAVEHRFVAAISGTPGATWMAATGREQPGTAAYGIALLSRYPVASWQVLRLPRIPMRF 118 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + + R A R + + + +P + + + F Sbjct: 119 PMYLPGPNRVMIVDEEPRAAVIAQLRTPMGGLTVANTHLSFVPGWNRRQLLRVIHDLRGF 178 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 + +F + N ++DHI+ Sbjct: 179 PGPRLLTGDLNMTPKTVGRWSGMRALATAETFP-------ADNPNRQLDHILTDD---PR 228 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 L +D P SDH P++V L Sbjct: 229 LRGGAVDASPM---PISDHRPLVVDL 251 >gi|319782958|ref|YP_004142434.1| endonuclease/exonuclease/phosphatase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168846|gb|ADV12384.1| Endonuclease/exonuclease/phosphatase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 370 Score = 55.2 bits (131), Expect = 9e-06, Method: Composition-based stats. Identities = 48/310 (15%), Positives = 82/310 (26%), Gaps = 77/310 (24%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHI--------------------------- 57 I DIIC+QE N Y Sbjct: 66 IAATRADIICMQEV----DNIEALKAFEYGYLFKMVGQGYRQKYTTSGNDSRGIDVAVMM 121 Query: 58 --ETCGQKSYNGVAILSKYQPIEIVTHLPGDDL----------DVQARFIEATFTINTQT 105 ET + V + S L +L + +E T+ Sbjct: 122 RNETAQGQPIEFVRMTSHAYVTYEQFGLHTPELEALGNQANERIFRRDCLEIDVTVGGVP 181 Query: 106 LRIGNLYLPHGNPI----------TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYN 155 L + ++ + + + + + ++ GD N Sbjct: 182 LTLYLVHFKSMGSPRNGLDGREATMPVRIAEAQAVRRIIEERFGKDYAADKRWAICGDMN 241 Query: 156 IIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW 215 Q I E L GF + + + +SF Y+ Sbjct: 242 DYRQRVKVAGDAIDGYRFEVVDEALSCINVLTAGGFCENVVERRPEMNRWSF--YHTRGP 299 Query: 216 SKNKGIRIDHIMLSPEATSLLHSA-------------------RIDTKPR-GWTKP--SD 253 + ++D+I+LS + +A +D PR GW +P SD Sbjct: 300 EERHLCQLDYILLSKGLAASNATAVPDIIRNGQPWRTIFPPGQEVDRFPRAGWDRPKASD 359 Query: 254 HTPVIVSLDI 263 H PV ++LD+ Sbjct: 360 HCPVAITLDM 369 >gi|209966133|ref|YP_002299048.1| endonuclease [Rhodospirillum centenum SW] gi|209959599|gb|ACJ00236.1| endonuclease [Rhodospirillum centenum SW] Length = 287 Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 38/278 (13%), Positives = 70/278 (25%), Gaps = 45/278 (16%) Query: 6 VATWNVNSI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 VATWN++S R A I+ + D++ LQE +H Sbjct: 40 VATWNIHSCVGMDARFAPERTACVIRGLDADVVGLQEV---------------GWHHRGE 84 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI-GNLYLPHGNPI 119 + + + L + + P G Sbjct: 85 MGVDQFAFLEAATGYRALAGPTKHNRAAHYGNALLTRRPVLEVAPLDLAMPMREPRGGLC 144 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 D + + + P + + E + Sbjct: 145 AVLDLDGVEVQVIVAHLGLDPWERNAQVTRILSFLDARPPRPTVFMGDLNEWR-PKAPRL 203 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + ++L + + A T +R+D I +SP L S Sbjct: 204 ARLSERLPDCAAPRSFHARLPT-------------------LRLDRIFVSPTL--HLASF 242 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQN 277 + + SDH PV + +P PR + + Sbjct: 243 EVVRSAM-TRRASDHLPVRALIGVP-PRDADRQAGGDR 278 >gi|110636350|ref|YP_676558.1| endonuclease/exonuclease/phosphatase [Mesorhizobium sp. BNC1] gi|110287334|gb|ABG65393.1| Endonuclease/exonuclease/phosphatase [Chelativorans sp. BNC1] Length = 265 Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 48/279 (17%), Positives = 81/279 (29%), Gaps = 65/279 (23%) Query: 2 SVVTVATWNVNS-I----RARIHNLAAWIKENNPDIICLQET----KTED--KNFPFETL 50 + + V TWN++ I R + + +++++PD++ LQE K D + F F L Sbjct: 19 ATMRVMTWNIHGGIGPDGRRDLQRVVDLVRKHDPDLVALQEVGSRRKVTDAAEAFTF-LL 77 Query: 51 QSLNYHIE----TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 +L H G A++ ++ V H + IEA L Sbjct: 78 STLGNHATETRLITAPDGNYGHALICRWPLRSTVCHDISYRKRERRAAIEAVAETPFGPL 137 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 + +L F +R + + + N Sbjct: 138 HVVAAHLGLS--------------------FRERRHQAQLLADLVRSGSAPTVLMGDLND 177 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226 +W +FW +A +D I Sbjct: 178 WVWSGSV--------------QTLLNRLFPGHTHFKTFPAFWPVFA----------LDRI 213 Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 P +L D + R SDH PVI L + E Sbjct: 214 YCRPG--GMLARQWTDPQAR---TASDHLPVIAELRMEE 247 >gi|302552172|ref|ZP_07304514.1| endonuclease/exonuclease/phosphatase [Streptomyces viridochromogenes DSM 40736] gi|302469790|gb|EFL32883.1| endonuclease/exonuclease/phosphatase [Streptomyces viridochromogenes DSM 40736] Length = 274 Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 39/280 (13%), Positives = 67/280 (23%), Gaps = 31/280 (11%) Query: 4 VTVATWNVNSIR-----ARIHNLAAWIKENNPDIICLQETKTED-KNFPFETLQSLNYHI 57 + + TWN+ R R + ++E PD++ LQE D +N L H Sbjct: 3 MRIVTWNLW-WRFGPWQTRQKAILTALRELRPDVVGLQEVWAADGENLAEWLAGELGLHC 61 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARF--IEATFTINTQTLRIGNLYLPH 115 + ++I + V + A + L + Sbjct: 62 AWAPSPAPERWRRRIGDATVDIGNAVLSRWPVVDRDVLPLPAPAETDDGRLALYARLAAP 121 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP---------QPHDCYNP 166 G+ + +R G P D Sbjct: 122 GHDVPFFTAHFTSVPHGSAVRCGQAAALAGFVARHRGGTPFPPVVTGDLNARPDSDEVRL 181 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226 + A A ++ + RID++ Sbjct: 182 LGGRGTAPAVPGQVLLDAWEYADPAAPAATWDAANPYV---------AAPHEPSARIDYV 232 Query: 227 ML---SPEATSLLHSA-RIDTKPRGWTKPSDHTPVIVSLD 262 + P + R P PSDH V+ LD Sbjct: 233 HVGPPGPGGLGRVRDVRRACDGPVDGVWPSDHAAVVADLD 272 >gi|262373464|ref|ZP_06066742.1| predicted protein [Acinetobacter junii SH205] gi|262311217|gb|EEY92303.1| predicted protein [Acinetobacter junii SH205] Length = 254 Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 38/259 (14%), Positives = 75/259 (28%), Gaps = 26/259 (10%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + TWN N +KE + DI +QE ++E+K S + + Sbjct: 21 LKILTWNCNG---AFRKKIELLKEIDADIYIIQECESEEK--------SQGTYDSWLPNR 69 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 + G + ++ ++ + N T Sbjct: 70 IWKGHNKNKGLGVFAKEQFKLEQLYWEDSNLELFLPLKINDDFQLLAVWTKYANSPTFQY 129 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 +++ + + I GD N Q D ++ +D V Q Sbjct: 130 IGQLWKYLQLHNTAIATKA-----TIICGDLNSNAQ-WDVWDRWWNHSDV-----VNQLK 178 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + + + +F+ KN ID++ S +S Sbjct: 179 TMNIHSLYHELTNEEQGKEKNSTFFMNRNQ--EKNY--HIDYLFSHTSLFSGRNSHFKIF 234 Query: 244 KPRGWTKPSDHTPVIVSLD 262 W + SDH P++ L+ Sbjct: 235 DKDEWLQYSDHLPILFDLN 253 >gi|182414371|ref|YP_001819437.1| endonuclease/exonuclease/phosphatase [Opitutus terrae PB90-1] gi|177841585|gb|ACB75837.1| Endonuclease/exonuclease/phosphatase [Opitutus terrae PB90-1] Length = 257 Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 42/282 (14%), Positives = 67/282 (23%), Gaps = 43/282 (15%) Query: 1 MSVVTVATWNV-NS--------------IRARIHNLAAWIKENNPDIICLQETK---TED 42 MS V + T+N+ + ++A + +A I E PD++ LQE Sbjct: 1 MSRVRLVTFNIAHGRGLAPIQGLTTPQKLKANLRKIARLIGELKPDVVALQEVDERSLWA 60 Query: 43 KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN 102 NF L+ E +N A L + F + Sbjct: 61 GNFDHLEYLRLHAGFEHAVFGIHNRRAGLLNLSYGNALLSRYPISYSETVVFGQRRVGEK 120 Query: 103 TQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD 162 ++ + + R + L Sbjct: 121 GFLFAEIDVAGRVMPLVNVHLHFSSREHRIRQIGRLLAWLRE----------KQEHSRGR 170 Query: 163 CYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR 222 P I D + L + H T +F G Sbjct: 171 WRVPAIVCGDLNNPGTSADATAALLSHLSDYGEYVLHPTKGR-TFPSPLP-------GRL 222 Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 +D + L I SDH PV V +P Sbjct: 223 LDFVFL--PGACNASHCEIVR-----CFLSDHRPVAVDFTLP 257 >gi|254881208|ref|ZP_05253918.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|254834001|gb|EET14310.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] Length = 359 Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 44/271 (16%), Positives = 82/271 (30%), Gaps = 32/271 (11%) Query: 4 VTVATWNV-----NSIRARIHN----LAAWIKENNPDIICLQET----KTEDKNFPFETL 50 + ++N N RA + + +++ +N DIICLQE + K + L Sbjct: 101 IKFLSYNTMAFEKN--RANTKDNPNPVLEYLRNSNADIICLQEYIVGGRLTKKEVDY-AL 157 Query: 51 QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 + Y NG+ S++ I++ P + I +N TL + N Sbjct: 158 RDYPYK-NYHKISGANGLGCYSRFP---ILSAHPVKYASLNNGSIAYKIKVNGDTLLVVN 213 Query: 111 LYLPHGN--PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168 +L Y + + + RL + + + + Sbjct: 214 NHLESNKLTEKDKEVYREMMKDPDKQKVSQGSRLLIGKLAEASAIRAVQADSIARLVAGY 273 Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 + S + + + Y + + RID+I+L Sbjct: 274 KGGGIIVCGDFNDSPISYTHRVVGEGLNDAFVESGNGFGISYNQNHFY----FRIDNILL 329 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 S S +D K SDH P+ Sbjct: 330 SKNLKSY--RCTVDNTI----KSSDHYPIWC 354 >gi|300909613|ref|ZP_07127074.1| exodeoxyribonuclease [Lactobacillus reuteri SD2112] gi|300893478|gb|EFK86837.1| exodeoxyribonuclease [Lactobacillus reuteri SD2112] Length = 53 Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 23/52 (44%), Gaps = 2/52 (3%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 + +W+VN +++ I H K + D CLQ T+ + P + + Sbjct: 1 MKFISWSVNGLKSAINHGFVEDFKRQDADFFCLQCTRLDKGEEPIQ-IPDYG 51 >gi|241166987|ref|XP_002409964.1| conserved hypothetical protein [Ixodes scapularis] gi|215494698|gb|EEC04339.1| conserved hypothetical protein [Ixodes scapularis] Length = 437 Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 37/271 (13%), Positives = 82/271 (30%), Gaps = 12/271 (4%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDK--NFPFETLQSLNYHIETCGQKSYNGVAILSKY 74 R+ +A ++ ++ D + LQE ++ +T +L + +GV ILSK Sbjct: 24 RMTAIANYLSSSDLDFVFLQEIWSQRDYKRIRSKTRNNLPHAHYFHSGVLGSGVCILSKS 83 Query: 75 QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRF 134 + + + F L + + T + + + Sbjct: 84 PIADTGMLKYNLNGYAHKFYHGDWFGGKVVGL-CKVNHRGLLINLYVTHLHAEYNRQRDI 142 Query: 135 LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDA 194 E + D + + + + + Sbjct: 143 YLSHRICQAFEMSQYVKLTSETCDLAIVAGDFNTEPLDPPYNIILHNTCLEDAFDSLCVG 202 Query: 195 IRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR----GWTK 250 H +H S +D + G RID++M ++ + ++ PR Sbjct: 203 ATCGHPDNHYTSAYDKHTCP----TGKRIDYVMF-KVGRGVVANCKVCKNPRLKTTSGLP 257 Query: 251 PSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 SDH PV V + + + +++ + + I Sbjct: 258 LSDHEPVEVVMRVTKSSQRESEYQVSRRRSI 288 >gi|49183387|ref|YP_026639.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. Sterne] gi|165870723|ref|ZP_02215376.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. A0488] gi|167634744|ref|ZP_02393063.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. A0442] gi|167641246|ref|ZP_02399499.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. A0193] gi|170688988|ref|ZP_02880189.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. A0465] gi|170707115|ref|ZP_02897571.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. A0389] gi|177654552|ref|ZP_02936408.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. A0174] gi|190567531|ref|ZP_03020444.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis Tsiankovskii-I] gi|227813041|ref|YP_002813050.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. CDC 684] gi|254686762|ref|ZP_05150620.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. CNEVA-9066] gi|254724838|ref|ZP_05186621.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. A1055] gi|254739015|ref|ZP_05196717.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. Western North America USA6153] gi|254744602|ref|ZP_05202281.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. Kruger B] gi|254756141|ref|ZP_05208170.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. Vollum] gi|254761959|ref|ZP_05213808.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. Australia 94] gi|49177314|gb|AAT52690.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. Sterne] gi|164713557|gb|EDR19081.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. A0488] gi|167510754|gb|EDR86147.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. A0193] gi|167529818|gb|EDR92566.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. A0442] gi|170127893|gb|EDS96764.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. A0389] gi|170667089|gb|EDT17851.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. A0465] gi|172080664|gb|EDT65747.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. A0174] gi|190561318|gb|EDV15290.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis Tsiankovskii-I] gi|227005247|gb|ACP14990.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. CDC 684] Length = 263 Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 34/271 (12%), Positives = 62/271 (22%), Gaps = 19/271 (7%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET------KTEDKNFPFETLQS 52 + + T N +S + +I LA I+E D+I LQE K N + Sbjct: 1 MKLLTLNCHSWQEENQIEKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGL 60 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 L + + ++ + F + Sbjct: 61 LLLEELKALHVKDYNITWDFSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTTYWKTR 120 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 I + + L + + + Sbjct: 121 KIVSATIAYNGKNITFYSCHLGWWNDEEELFKGQVNRLMERVDSNELSFLMGDFNNNARL 180 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 E + WD +RID I+ + Sbjct: 181 QGEGYEYMMQEGLYDTYELAIEKDEGTTVQGEIAGWD------ENKHNLRIDLILCNRS- 233 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + S+++ SDH V V +DI Sbjct: 234 -EKIRSSKVVFNGTNRKIISDHFGVEVQVDI 263 >gi|156551960|ref|XP_001602349.1| PREDICTED: similar to neutral Sphingomyelinase, putative [Nasonia vitripennis] Length = 404 Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 48/284 (16%), Positives = 81/284 (28%), Gaps = 31/284 (10%) Query: 1 MS---VVTVATWNVNSI------RA-RIHNLAAWIKENNPDIICLQETKTEDK--NFPFE 48 MS + V T N I R R++ +A + + DI+CLQE + D + Sbjct: 1 MSEELTLNVLTLNCWGIPYVSKNRVNRMNAIADKLMSEDYDIVCLQEVWSIDDFRLIRAK 60 Query: 49 TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108 T L Y +G+ I S+Y +++ H + V F L Sbjct: 61 TQDKLPYSHYFFSGVVGSGICIFSRYCIGDVMFHKWTLNGYVHKIHHGDWFGGKGVGL-- 118 Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168 + + ++ + + + I + +I Sbjct: 119 ------CRIQAQNVHINVYVAHLHAEYCRENDEYNAHRVMQAFDTAQFIRMTRGGADAVI 172 Query: 169 WENDACFTLEVRQSFQKL-----QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223 D + + DA S+ D + +G RI Sbjct: 173 LGGDLNTEPQDLAFRIICGIAELSDACSKDANSLGTSECAKNSYTDLRV-ARKIPQGKRI 231 Query: 224 DHI--MLSPEATSLLHSARIDTKPRGWTK---PSDHTPVIVSLD 262 DHI + S + R K SDH V+ S Sbjct: 232 DHILYLGSKRYKVDVSEFSHPFPTRVPDKTFSYSDHEAVMASFK 275 >gi|48596447|emb|CAD92793.1| pol protein [Drosophila melanogaster] Length = 1080 Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 41/265 (15%), Positives = 82/265 (30%), Gaps = 36/265 (13%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 ++ +A WN I +I L +I + I+ + ET+ ++K+ E Y + Sbjct: 9 ILKIAFWNAGGINNKIDELKLFILNIDAHIVIVTETRLDNKSTKLELPGYFTYLAQNPVS 68 Query: 63 KSYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 GVA + + + + + ++ + I ++Y P + Sbjct: 69 SKRGGVATIVNSSIRHMALEPIEKECIQSAPIVLLPENNRRSEMIVIASVYCPPSLSWSP 128 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + L FA + L + I GD+N + E Q Sbjct: 129 HHF-------TDVLNFAEKTLGGQTKFILCGDWNAKH---RQWGCTRACQRGTALYEAVQ 178 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS--PEATSLLHSA 239 + + + A HDT S ID + + S+ Sbjct: 179 ADPMAEIIATGCATHFPHDTRKNPSA---------------IDFSICKGLGRLEKRISSS 223 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIP 264 SDH P+++ +++ Sbjct: 224 --------ADLSSDHLPILLEINLD 240 >gi|167463375|ref|ZP_02328464.1| hypothetical protein Plarl_12581 [Paenibacillus larvae subsp. larvae BRL-230010] gi|322382169|ref|ZP_08056092.1| hypothetical protein PL1_2483 [Paenibacillus larvae subsp. larvae B-3650] gi|321153888|gb|EFX46246.1| hypothetical protein PL1_2483 [Paenibacillus larvae subsp. larvae B-3650] Length = 247 Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 43/265 (16%), Positives = 88/265 (33%), Gaps = 33/265 (12%) Query: 5 TVATWNVNSIR-----ARIHNLAAWIKENNPDIICLQETKTEDKNFPF--ETLQSLNYHI 57 V T+N++ R + +A I+++ D+I L E DK F E L + Sbjct: 8 RVVTFNIHHGRGTDRKLNLDRIAQVIEKSQADVIALNEV---DKYFSRRSEYTDQLGWLS 64 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 E + +G+ +K + T + + L + + L Sbjct: 65 E---RLKLDGIFGAAKTNKVSEETDCMIREYGNALLSRFPIVDVKNHNLSVYPIRL---- 117 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + + ++L+ L L + I+ + D ++P+I D Sbjct: 118 -EGRALLEVTLLIGGQWLKLYVTHLSLTPFIQSIQADMILNKIIDDHHPMILLGDFNTWP 176 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 + + + + +F + +R+D+I +S + Sbjct: 177 QSKLWRKVTAKLTDVSHSFRKKPCL---TFPSFRPR-------VRLDYIFISHHF--HIS 224 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLD 262 SA + T+ SDH P+I +L Sbjct: 225 SAEVITE---DPAASDHLPLIATLK 246 >gi|325915043|ref|ZP_08177372.1| metal-dependent hydrolase [Xanthomonas vesicatoria ATCC 35937] gi|325538741|gb|EGD10408.1| metal-dependent hydrolase [Xanthomonas vesicatoria ATCC 35937] Length = 288 Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 36/274 (13%), Positives = 74/274 (27%), Gaps = 34/274 (12%) Query: 4 VTVATWNVNSIRA------------RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51 + V ++NV R R + A I++ +PD+ QE E + L Sbjct: 35 LRVMSFNV---RVPVDTDGDKRWQVRRDAMVALIRQTHPDVFGTQELVQEQAQYLATHLP 91 Query: 52 SLNYHIETCGQKSYNGVA-ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 + + + + + + +V + +++ + L Sbjct: 92 TYRWFGKGRNADGGGEHMGVFYDSRVLTVVESGDFWLSETPGTPGSSSWGTDLPRLVTWA 151 Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170 L+ G+ ++ + + Q + +P + Sbjct: 152 LFERRGDKRRFYLFNTHLPHRDQDEPAREQAAR-----LILSRIAKLPADIPVVLTGDFN 206 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230 +D + + +T +S RID I+ Sbjct: 207 SDPDKSTYPTLTAALGDARTHAPKRNGPENTFQDFSTHPTR----------RIDWILF-R 255 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 T + G PSDH PV+ D P Sbjct: 256 GLTP--TRFTTLDERPGGILPSDHYPVLAEFDWP 287 >gi|147827603|emb|CAN64078.1| hypothetical protein VITISV_041213 [Vitis vinifera] Length = 1017 Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 4/46 (8%) Query: 1 MSVVT--VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTED 42 M V+ V +WNV + A IK D++CLQETK ++ Sbjct: 167 MDVMKLRVLSWNVRGANDSEKRKVIKALIKSQKVDVVCLQETKMQE 212 >gi|157125734|ref|XP_001660755.1| neutral Sphingomyelinase, putative [Aedes aegypti] gi|108882608|gb|EAT46833.1| neutral Sphingomyelinase, putative [Aedes aegypti] Length = 420 Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 49/287 (17%), Positives = 83/287 (28%), Gaps = 38/287 (13%) Query: 1 MSV-VTVATWNVNSI------RA-RIHNLAAWIKENNPDIICLQETKT-EDKNFPFETLQ 51 M++ ++V T N+ I RA R+ + + N DI+ LQE + D + + ++ Sbjct: 1 MALELSVLTLNIWGIPYVSKDRAVRVEAIGDVLSSGNYDIVSLQEVWSDSDYQYLKKRVE 60 Query: 52 S-LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL---- 106 L + +G+A+LS+Y + + H + V F L Sbjct: 61 GVLPFAHYFYSGVVGSGLALLSRYPIVSALFHAWSVNGYVHRIQHGDWFGGKGVGLAKIA 120 Query: 107 -------RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159 + ++ +F I AGD N P Sbjct: 121 VNDQLVNVYAAHLHAEYDRKCDDYMAHRVIQAYDTAQFIESTRGNAVMQILAGDLNTEPG 180 Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK 219 + + L +T Y + Sbjct: 181 DLAYRVLQTNAKLIDTADKKLYAAGHLGTNEIGRNSYTDPETGKKY------------PQ 228 Query: 220 GIRIDHIM--LSPEATSLLHSARI---DTKPRGWTKPSDHTPVIVSL 261 G RID+IM + L R+ D P SDH V + Sbjct: 229 GKRIDYIMYRIGEHFEGRLLEHRLPLPDRIPGKDISYSDHEAVYAKI 275 >gi|313158155|gb|EFR57560.1| endonuclease/exonuclease/phosphatase family protein [Alistipes sp. HGB5] Length = 302 Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 38/284 (13%), Positives = 74/284 (26%), Gaps = 43/284 (15%) Query: 2 SVVTVATWNVNSIRARIHNLAAW----------IKENNPDIICLQETKTEDKNFPFETLQ 51 S + V ++N+ A AAW I++ PD+I +QE + + L Sbjct: 30 SELNVMSYNIRYANASDKGDAAWDARKEASVAMIRDVKPDVIGMQEPRFSQAQYLIGELT 89 Query: 52 SL-NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 +Y++ + S + A+ + E++ G + + R Sbjct: 90 EYEHYYLAPDDKDSQHRNAVWWRKDRFEML--AQGYFFLNEKDITQPIKGWGHNQFRTAL 147 Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP------QPHDCY 164 + R ++ Sbjct: 148 WVKLRERSTGKEFFFFNTHLAHRASPVEGGDIDQVARTESVKLIVEQMKQIAGRYAPIFV 207 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG---- 220 + + A + M + +YS+ N G Sbjct: 208 TGDMNASYAAGDGRRTCLDGFFEFMWSARETAPDGEADDVYSY---------NNFGEGTP 258 Query: 221 ---IRIDHIM---LSPEATSLLHSARIDTKPRGWTKPSDHTPVI 258 IDHI ++P + I+ G SDH P++ Sbjct: 259 RFTWNIDHIFYRKVTP-----VRFRTINNDGYGVPYISDHFPIL 297 >gi|45594385|gb|AAS68534.1| pol protein [Drosophila melanogaster] Length = 1080 Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 41/265 (15%), Positives = 82/265 (30%), Gaps = 36/265 (13%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 ++ +A WN I +I L +I + I+ + ET+ ++K+ E Y + Sbjct: 9 ILKIAFWNAGGINNKIDELKLFILNIDAHIVIVTETRLDNKSTKLELPGYFTYLAQNPVS 68 Query: 63 KSYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 GVA + + + + + ++ + I ++Y P + Sbjct: 69 SKRGGVATIVNSSIRHMALEPIEKECIQSAPIVLLPENNRRSEMIVIASVYCPPSLSWSP 128 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + L FA + L + I GD+N + E Q Sbjct: 129 HHF-------TDVLNFAEKTLGGQTKFILCGDWNAKH---RQWGCTRACQRGTALYEAVQ 178 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS--PEATSLLHSA 239 + + + A HDT S ID + + S+ Sbjct: 179 ADPMAEIIATGCATHFPHDTRKNPSA---------------IDFSICKGLGRLEKRISSS 223 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIP 264 SDH P+++ +++ Sbjct: 224 --------ADLSSDHLPILLEINLD 240 >gi|326798265|ref|YP_004316084.1| endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21] gi|326549029|gb|ADZ77414.1| Endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21] Length = 259 Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 42/270 (15%), Positives = 86/270 (31%), Gaps = 52/270 (19%) Query: 4 VTVATWNVN-SIRA----RIHNLAAWIKENNPDIICLQET-----KTEDKNFPFETLQSL 53 + + ++N++ A ++ +AA+IKE+ DI+ LQE ++ + + P Q Sbjct: 30 LKIMSYNIHHGADANEQDQLEAMAAFIKESGADIVGLQEVDSMCRRSGNVDQPRVLAQKT 89 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 H +Y+G + + + L V + T + + Sbjct: 90 GMHYTYTRHFAYDGGSYGQALLSRFPIERTVNERLPVSTGATTSFLTAE----VVVPTHR 145 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + Y + +++ S + P I GD N PQ Sbjct: 146 TLSIGVVHLDYRAEAGRLRQAEIIDSIIKKASHPFILTGDMNAEPQHETLA--------- 196 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 +++ + K K ID+IML Sbjct: 197 -----------------VLSKQLIATQGRDAFTY----PTAPPKKK---IDYIMLDKRLK 232 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + + A++ SDH P++ +++I Sbjct: 233 ASVIEAKVLP-----VLFSDHLPIVSTIEI 257 >gi|317504627|ref|ZP_07962594.1| AP endonuclease domain protein [Prevotella salivae DSM 15606] gi|315664248|gb|EFV03948.1| AP endonuclease domain protein [Prevotella salivae DSM 15606] Length = 363 Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 41/269 (15%), Positives = 79/269 (29%), Gaps = 27/269 (10%) Query: 4 VTVATWNVNSIRARIHN-------LAAWIKENNPDIICLQETKTED-KNFPFETLQSLNY 55 + V ++NV S A + +IK +PDI+C+QE T + + + Y Sbjct: 101 IKVMSYNVWSF-AGWKRYADGKFPILEYIKVQHPDILCMQEAMTNEIGQHRVDAVLDKLY 159 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + ++ Y IV+H I T+ I N +L Sbjct: 160 -AYKDTLRYSQTSDCIALYSRYPIVSHERISYPSKGNLSGAFEVKIGNDTVIIVNNHLET 218 Query: 116 GNPITSTKYDDKISWIKR---FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 K + K + +++ + + Y + Sbjct: 219 TGLSNEDKREFKSLVKGDLKVTAAKQTSYRLVDKLGDASAKRAVQADAVARYISNHLDKS 278 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI--RIDHIMLSP 230 + + + + + Y+A G+ RIDHIM + Sbjct: 279 MIVCGDFNDTPISYARHTIAKNLIDCYVSTGNGPGVSYHAG------GMYVRIDHIMCTK 332 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIV 259 + ++D SDH P++ Sbjct: 333 DWQPYA--CKVDHSI----GESDHYPIVC 355 >gi|260172862|ref|ZP_05759274.1| hypothetical protein BacD2_13418 [Bacteroides sp. D2] gi|315921145|ref|ZP_07917385.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313695020|gb|EFS31855.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 290 Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 44/280 (15%), Positives = 81/280 (28%), Gaps = 37/280 (13%) Query: 4 VTVATWNV-----------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52 + VA++NV N R L I ++ DI QE K L + Sbjct: 21 LNVASYNVRNSNPNDAKAGNGWEQRCPVLTQLITFHDFDIFGAQEVKHNQLEDMLNALPA 80 Query: 53 LNY-HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 NY + K+ A + + + L + + Sbjct: 81 YNYIGVGRDDGKTKGEYAPIFYRKDKFKLLKSGNFWLSEDTTKPNKGWDAAYTRICTWGE 140 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 + ++ + I R S +L + + G D N Sbjct: 141 FKDKTGKFKFWFFNLHMDHIGVVARRESAKLVISKIKEMCG--------KDPVILTGDFN 192 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 + + + + + + T+ + W+ ++++ N RIDHI ++P Sbjct: 193 VDQTSESYQVLHESGILSDSYEVAQMRYATNGTCTGWN--PNTYTPN---RIDHIFVTPN 247 Query: 232 ATSLLHSARIDTKPRGWTK----------PSDHTPVIVSL 261 T + + T PSDH PV L Sbjct: 248 FT--VEKYGVLTDTYRTKNETTGKYESHIPSDHFPVKAVL 285 >gi|182420508|ref|ZP_02643101.2| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens NCTC 8239] gi|182380424|gb|EDT77903.1| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens NCTC 8239] Length = 262 Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 47/276 (17%), Positives = 79/276 (28%), Gaps = 28/276 (10%) Query: 1 MSVVTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51 M + V T+N+ N R + IK++ PDII QE + + L Sbjct: 1 MRNLKVMTFNLKYDFKAQDNNEWSQRCLRITKLIKDHLPDIIGTQEGLIHMLDDMDDLLD 60 Query: 52 SLNY---HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108 ++ E G+ +N + L + + ++ ++ Sbjct: 61 EYSWVGEDREGNGKDEFNAIFFLKNKFEVLEWNQFWLSKTPNIKGSKDFNSSLPRICTKL 120 Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL-EEPLIFAGDYNIIPQPHDCYNPI 167 G I L+ ++ II +CY Sbjct: 121 KLKDKISGLKIDIYNTHLDHESELAREEGIKIILKEVKKNYEIYKTPYIIMGDFNCYLED 180 Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227 N F + + + H Y G ID+I+ Sbjct: 181 NLFNIIREEETNNTCFNVCYDNIKNNILGTFHYFKGGY-------------DGRIIDYIL 227 Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 S E + S ID + PSDH PVI L++ Sbjct: 228 YSKEYE--IKSLNIDDRKINGGYPSDHYPVICELEL 261 >gi|29290087|gb|AAO67559.1| Pol protein [Drosophila virilis] Length = 1537 Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 40/282 (14%), Positives = 82/282 (29%), Gaps = 37/282 (13%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNF-PFETLQSLNYHIETC 60 + +A WN +R +++ L ++ + DI+ L E + P + YH Sbjct: 49 NSFKIAYWNAAGVRNKLNELEVFMNRHKIDIMMLVELRLGPSALNPGPPITINGYHTYAA 108 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + + + H+ + + ++ + I + Sbjct: 109 TRPPPHHRCGGVATLVKHGIKHIALEAIVFESMQSAPVAVTLAKNETIVLAPI------- 161 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 S F I GD+N W + Sbjct: 162 YCPPQYNWSADMFAKLFQHFEKLSGSGFILCGDWNAKH---------SWWGNQRACRRGV 212 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH-SA 239 + + + + + + TH Y+ S+N+ ID + S L + Sbjct: 213 ELLRSIHSNKKLNILATGGATHFPYT---------SRNRPSAIDIAVYSGINNDRLQTHS 263 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 ID + SDH P+ + L + + T+ + PI Sbjct: 264 TIDLE-------SDHLPIHIGLRV---GRFPYKQTTMRLLPI 295 >gi|182414598|ref|YP_001819664.1| endonuclease/exonuclease/phosphatase [Opitutus terrae PB90-1] gi|177841812|gb|ACB76064.1| Endonuclease/exonuclease/phosphatase [Opitutus terrae PB90-1] Length = 313 Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 5/63 (7%) Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLL--HSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 W Y+ ++ R+DHI++SP + H A I G + SDH PV+V LD E Sbjct: 254 WTYHY--RRRDSYTRVDHILVSPALAPAVAQHRAWI-ADLDGVNEASDHRPVVVKLDFAE 310 Query: 266 PRK 268 Sbjct: 311 SSP 313 >gi|187729939|ref|YP_001853833.1| endonuclease/exonuclease/phosphatase [Vibrio tapetis] gi|182894498|gb|ACB99663.1| putative exported nuclease [Vibrio tapetis] Length = 287 Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 38/278 (13%), Positives = 83/278 (29%), Gaps = 38/278 (13%) Query: 2 SVVTVATWNVNSIRARI---HNLAAWIKENNPDIICLQETKTEDKNFP---FETLQSLNY 55 + + V ++N+ + +R+ + I++ N DII LQE N + Sbjct: 33 NSIRVGSYNI--MASRMGSTDAIVEAIRKMNVDIIGLQEV----DNMTGRSGKNFSKEGS 86 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + + + N + + + + ++ + ++ Sbjct: 87 NPVSQAEYIANKLGMNYYFCKAIDHDGGEYGTAVLSKYDLKLNKRMELPNIKGAEQRAAC 146 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + Y + + L F +Q L E+ ++ ++N Sbjct: 147 AVEVDVPNYPAPVMLVTTHLDFTTQPLRAEQVRTLQTKFSS----------WQFKNALPI 196 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 + + A D Y+ + N +ID+I+ S Sbjct: 197 IVGDLNLPPQSTEYLDLTAWFNDTDKELKYTAPSW-------NPDRKIDYILTSNAQKWD 249 Query: 236 LHSARIDTKPRGWTKP--------SDHTPVIVSLDIPE 265 + I KP P SDH P++V + + E Sbjct: 250 IKEVYI-PKPSDRATPESKPYASVSDHLPLLVEMKLTE 286 >gi|212275738|ref|NP_001130134.1| hypothetical protein LOC100191228 [Zea mays] gi|194688370|gb|ACF78269.1| unknown [Zea mays] gi|195625836|gb|ACG34748.1| endonuclease/Exonuclease/phosphatase family protein [Zea mays] Length = 391 Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 41/287 (14%), Positives = 77/287 (26%), Gaps = 46/287 (16%) Query: 2 SVVTVATWNVNS-----IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56 + T+NV +R+R+ L IK++ PD IC QE Y Sbjct: 116 KTFKIMTYNVWFREDLELRSRMDALGDLIKQHCPDFICFQEV------------TPYIYM 163 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 + +LS I++ + F+ +T + + G Sbjct: 164 LMQKSDWWQQYTCLLSHENAIQMPYYCMQLSKMPTKPSDCIPFSNSTMGRELCIASVRTG 223 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI-IPQPHDCYNPIIWENDACF 175 + Q E I P+ + +D Sbjct: 224 EITKLILATTHLESPCPAPPKWDQMYSKERVAQAKQSLEILGGFPNAILCGDMNWDDKGD 283 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI--RIDHIML----- 228 G+TDA +++ S N+ + R+D + Sbjct: 284 GPFP-------LQDGWTDAWVELKPGEDGWTYDTKANGMLSGNRKLQKRLDRFVCKLADF 336 Query: 229 ---SPEATSL--------LHSARIDTKPRGWT---KPSDHTPVIVSL 261 S E +I + + PSDH +++++ Sbjct: 337 KMDSIEMIGKEAIPGVSYFKEKKIRKENQRIELPVFPSDHFGLVLTI 383 >gi|260220365|emb|CBA27833.1| hypothetical protein Csp_A04240 [Curvibacter putative symbiont of Hydra magnipapillata] Length = 284 Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 52/288 (18%), Positives = 91/288 (31%), Gaps = 71/288 (24%) Query: 1 MSVVTVATWNVN----SI----RARIHNLAAWIKENNPDIICLQET-KTE---DKNFPF- 47 M + V T+N++ + R IHNL+ ++ + D++CLQE K ++FP Sbjct: 36 MKTLRVVTYNIHKGVQGLGPLRRLEIHNLSHAMELMDADVLCLQEVRKLHQREARHFPHW 95 Query: 48 ------ETLQSLNYHIETCGQ----KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA 97 + L Y +G A+LSK+ ++ D Q + Sbjct: 96 PQAPQADYLAPSGYEAIYRTNAITRHGEHGNALLSKWPVVQHQHEDMSDHRLEQRGLLHV 155 Query: 98 TFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII 157 + Q+L + ++L + +I+R + + L AGD+N + Sbjct: 156 ELDVAGQSLHVLVVHLGLIRAGRGRQLQQLTQFIQREIPPDAPLL-------VAGDFNDL 208 Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK 217 P + Sbjct: 209 PAWVARQLAPAGLKAPVTKP--------------CVTFPSRLPLVQ-------------- 240 Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRG--WTKPSDHTPVIVSLDI 263 +DH++ T SA T PRG W + SDH P+I + Sbjct: 241 -----LDHVLA-RGLTP--VSA---TAPRGMSWARMSDHLPLITEWQL 277 >gi|147783561|emb|CAN68445.1| hypothetical protein VITISV_031264 [Vitis vinifera] Length = 1922 Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 24/175 (13%), Positives = 46/175 (26%), Gaps = 9/175 (5%) Query: 6 VATWNVNSIRARIHN--LAAWIKENNPDIICLQETK--TEDKNFPFETLQS--LNYHIET 59 + +WN + +R + ++ NPD++ LQETK D+ + L T Sbjct: 676 ILSWNTRGLGSRKKRRTVRRFLSTQNPDVVMLQETKREIWDRRLVSXIWKEKVLGSFSVT 735 Query: 60 CGQKSYNGVAIL---SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 S + + +L + + I + G Sbjct: 736 VKLNSDEEESFWLTSVYGPNKAVWREDFWLELQDLHGLTFPRWCVGGDFNVIRRISEKMG 795 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 + + +IK L E F + + E Sbjct: 796 DSRLTVNMRRFDEFIKGKWFENMWLLHPEFKEKFRDWWQECTVEGWEGDSWKIEG 850 >gi|257889202|ref|ZP_05668855.1| endonuclease/exonuclease/phosphatase [Enterococcus faecium 1,141,733] gi|257825274|gb|EEV52188.1| endonuclease/exonuclease/phosphatase [Enterococcus faecium 1,141,733] Length = 274 Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 42/281 (14%), Positives = 80/281 (28%), Gaps = 29/281 (10%) Query: 4 VTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQET--KTEDKNFPFETLQSLNYH 56 + + T N +S R ++ +A I D+I LQE + K E L++ + Sbjct: 1 MKIMTLNTHSWLEEEPREKLKQIAQKICHEQYDVIALQEVNQTMDAKRLTSEQLKNFSQV 60 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 E +S N L + + T+ ++ I + + Sbjct: 61 QEQTPVRSDNFAYCLIQLLAEQGETYYWSWEMSHIGYAIYEEGNALLSKQPLISQTHLVS 120 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 Y + + + + + D Sbjct: 121 ETKEKEDYHTRKILVGQTSVKSQCITVASCHFSWWADEKSGFAFEWKELEASLAPLTTPL 180 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLY---------SFWDYYADSWSKNK-GIRIDHI 226 + + G+ ++ Y + + D W NK G+RID+I Sbjct: 181 YLLGDFNNPAEGSGYDLVAKSQLPIRDAYPIAQKKQAEATIEKRIDGWENNKEGLRIDYI 240 Query: 227 MLSPEATSLLHSARIDTKPR---GWTKP--SDHTPVIVSLD 262 + + + R G P SDH V V+L+ Sbjct: 241 YVP-------QDCFVTSYQRIFDGENGPIVSDHYGVAVTLE 274 >gi|170764286|ref|ZP_02640401.2| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens CPE str. F4969] gi|170713790|gb|EDT25972.1| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens CPE str. F4969] Length = 262 Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 47/276 (17%), Positives = 79/276 (28%), Gaps = 28/276 (10%) Query: 1 MSVVTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51 M + V T+N+ N R + IK++ PDII QE + + L Sbjct: 1 MRDLKVMTFNLKYDFKAQDNNEWSQRCLRITKLIKDHLPDIIGTQEGLIHMLDDMDDLLD 60 Query: 52 SLNY---HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108 ++ E G+ +N + L + + ++ ++ Sbjct: 61 EYSWVGEDREGNGKDEFNAIFFLKNKFEVLEWNQFWLSKTPNIKGSKDFNSSLPRICTKL 120 Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL-EEPLIFAGDYNIIPQPHDCYNPI 167 G I L+ ++ II +CY Sbjct: 121 KLKDKISGLKIDIYNTHLDHESELAREEGIKIILKEVKKIYKIYKTPYIIMGDFNCYLED 180 Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227 N F + + + H Y G ID+I+ Sbjct: 181 NLFNIIREEETNNTCFNVCYDNIKNNILGTFHYFKGGY-------------DGRIIDYIL 227 Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 S E + S ID + PSDH PVI L++ Sbjct: 228 YSKEYE--IKSLNIDDRKINGGYPSDHYPVICELEL 261 >gi|288928983|ref|ZP_06422829.1| AP endonuclease domain protein [Prevotella sp. oral taxon 317 str. F0108] gi|288329967|gb|EFC68552.1| AP endonuclease domain protein [Prevotella sp. oral taxon 317 str. F0108] Length = 362 Score = 55.2 bits (131), Expect = 1e-05, Method: Composition-based stats. Identities = 41/252 (16%), Positives = 70/252 (27%), Gaps = 33/252 (13%) Query: 21 LAAWIKENNPDIICLQET----KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQP 76 + ++KE + DI+CLQE K + YH Y+ +AI SKY Sbjct: 124 MLNYVKEKDADILCLQEANLGGKFQAT-IDSLLNSIYPYHDIKEKTTIYDRLAIYSKYP- 181 Query: 77 IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 IV + + T+ + N + + + + K Sbjct: 182 --IVRSERVMYPQSEDFSQACWVAMPGDTVLVVNNHFATTGLTEAQRQEFKSMLKGDLRT 239 Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPI---------IWENDACFTLEVRQSFQKLQ 187 L I C I D + + Sbjct: 240 KQMPSLGKSLVHKLGEYAKIRAPQVQCVAQFVRKRKGQSIILCGDFNDSPISYAHRCMAK 299 Query: 188 NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRG 247 + Y+ +++ +RID+IM S + L ++ K Sbjct: 300 ELTDCYVASGNGPGI------SYHRNAFY----VRIDNIMCSDDWQPL--KCVVENKV-- 345 Query: 248 WTKPSDHTPVIV 259 K SDH P+ Sbjct: 346 --KTSDHYPIFC 355 >gi|190338709|gb|AAI63237.1| Smpd2 protein [Danio rerio] Length = 420 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 43/284 (15%), Positives = 74/284 (26%), Gaps = 35/284 (12%) Query: 4 VTVATWNVNSIR-------ARIHNLAAWIKENNPDIICLQETKTEDKNF--PFETLQSLN 54 + V + N IR R + + DI LQE +E + S Sbjct: 9 LRVFSLNCWGIRFLSKLCAQRYEMIGELLGREQHDIALLQEVWSERDFLFLKRKLSCSHP 68 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN---- 110 Y +G+A+ SK++ + + + + F L I Sbjct: 69 YTHYFKSGVIGSGLAVFSKHRIQDALLYQYSLNGYPYMLSHGDWFGGKAVGLVIVEVFGL 128 Query: 111 -------LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 + +I +F + +I GD N+ PQ Sbjct: 129 KAHVYVTHLHAEYSRAQDGYLPHRIVQSWELQQFVRHTSHGADLVILGGDLNMHPQDLGN 188 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223 E + T + KGIRI Sbjct: 189 RLLRSHTGLRDCYTETDKFDGCEDGHTLIANNHFTKKQDLI-----------PFEKGIRI 237 Query: 224 DHIML--SPEATSLLHSARIDTKPRGWTKP--SDHTPVIVSLDI 263 D+I++ S + S SDH ++ L++ Sbjct: 238 DYILMKGSQRVSVKCESLSTTKGSVSDKPFPYSDHEALMADLNL 281 >gi|242238792|ref|YP_002986973.1| endonuclease/exonuclease/phosphatase [Dickeya dadantii Ech703] gi|242130849|gb|ACS85151.1| Endonuclease/exonuclease/phosphatase [Dickeya dadantii Ech703] Length = 287 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 42/294 (14%), Positives = 78/294 (26%), Gaps = 44/294 (14%) Query: 4 VTVATWNVN-SI----RARIHNLAAWIKENNPDIICLQET-----KTEDKNFPFETLQSL 53 + + ++N+ + R + +A ++ DIIC+QE ++ + P E L Sbjct: 1 MLIVSYNIQYGLGRDNRYDLARIADEVR--GADIICMQEVERFWQRSGMVDQPTELAALL 58 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 + G +I + + G + + + + + + Sbjct: 59 KEYYWVYGANLDMDASIAAPDGRVSHRRRQFGTLTLSRWPMLSSRNFPLPKFGTLTQHSI 118 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 G T + + + D + A Sbjct: 119 QQGVLETVIDTGTRSFRVYNTHLSHLCAQTRLPQVAALLDIFARSPEEGGAWCGGHPDPA 178 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF---------------------W---- 208 E + M D YS W Sbjct: 179 AGWTEGAMPPMPAEMMLMGDL--NCLPDSEEYSRLIGPVSPAHGRLVRHRGLMDAWVAAG 236 Query: 209 -DYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + S N RIDH +L+P + + DT +G SDH P+ V L Sbjct: 237 QPESSGSTHPNVNGRIDHCLLTPTLGAEVRRCWADTDNQG----SDHHPLWVEL 286 >gi|315498220|ref|YP_004087024.1| endonuclease/exonuclease/phosphatase [Asticcacaulis excentricus CB 48] gi|315416232|gb|ADU12873.1| Endonuclease/exonuclease/phosphatase [Asticcacaulis excentricus CB 48] Length = 275 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 35/274 (12%), Positives = 70/274 (25%), Gaps = 35/274 (12%) Query: 4 VTVATWNVNSIR-----------ARIHNLAAWIKENNPDIICLQETKTE-DKNFPFETLQ 51 + + ++N IR R +AA I PD++ +QE + Sbjct: 22 LRLMSYN---IRYANPQDVPPWPERGPRMAAQIAFLAPDVLGVQEALLPMVDDLSQALGD 78 Query: 52 SLNYHI--ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 +Y + + + + + + ++ +A R+ Sbjct: 79 YDHYGVGRDDGAKSGESTTVFWRRDRFEKVSATTQWCGQTPDTPSKDADAAFPRTITRLI 138 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 G +K A Q L +P H Sbjct: 139 LKDKRSGQVFDVRNAHFDHVGVKARENCAVQIL----------SLPPVPGAHLIVLGDFN 188 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 + + + R T ++ +D G IDHI + Sbjct: 189 TGMGSAPYKRFTAETSPLKDSRVASTRRFGPT-GTFNGFDIRQTD-----GEAIDHIFVD 242 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + S T SDH P++ +++ Sbjct: 243 RTLM--VKSFATLTDSYSGKVISDHFPIVADIEL 274 >gi|73541781|ref|YP_296301.1| endonuclease/exonuclease/phosphatase [Ralstonia eutropha JMP134] gi|72119194|gb|AAZ61457.1| Endonuclease/exonuclease/phosphatase [Ralstonia eutropha JMP134] Length = 284 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 44/303 (14%), Positives = 84/303 (27%), Gaps = 62/303 (20%) Query: 4 VTVATWNV------NSIRARIHNLAAWIKE-NNPDIICLQET-------KTEDKNFPFET 49 + + +WN+ + R + A ++ + D+ICLQE + Sbjct: 1 MELISWNIQWGRGADG-RVDLSRSVATMRAMADADVICLQEVTRGFGELRGAPGADQVSE 59 Query: 50 LQSL--NYH---------IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLD-----VQAR 93 L +L Y + G G I ++ E+ H D + Sbjct: 60 LSALLPGYRLLFAPGVDRFGSDGGPRQFGNLIATRLPVHEVFRHALPWPADPDVASMPRV 119 Query: 94 FIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFAS-------------Q 140 IEAT ++ LR+ +L + + + + + Sbjct: 120 AIEATLQAGSRPLRVICTHLEYYSAHQRAAQANALRDWHAEACGHALRPGRSESTPGPFT 179 Query: 141 RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHD 200 + GD+N P + +D T Sbjct: 180 PAVRPTEAVLCGDFNSKPDDIAYRRMLEPFDD-DTTPWRDAWMHIHPGQSHAPTCAMYDK 238 Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 W + D + ++ + ++ TK SDH P+++S Sbjct: 239 EQ-----WPEPPFA--------CDFVFVTENLAERVRRCEVN----AATKDSDHQPIVLS 281 Query: 261 LDI 263 LDI Sbjct: 282 LDI 284 >gi|33591896|ref|NP_879540.1| putative endonuclease/exonuclease/phosphatase family protein [Bordetella pertussis Tohama I] gi|33571540|emb|CAE41020.1| putative endonuclease/exonuclease/phosphatase family protein [Bordetella pertussis Tohama I] Length = 286 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 41/291 (14%), Positives = 91/291 (31%), Gaps = 32/291 (10%) Query: 1 MSVVTVATWNVNSIRA---RIHNLAAW---IKENNPDIICLQET----------KTEDKN 44 MS++ V ++N++ R+ R +L + PD++ LQE + ++ Sbjct: 1 MSLIRVVSYNIHKGRSALGRRESLNDLRLGLYGLRPDLVFLQEVQGRNEVSSVLHAQHES 60 Query: 45 FPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 Y + +G A+LS++ ++ D Q + A + Sbjct: 61 LAAALRLQAAYGRNAIRTGTDHGNALLSRFDILDHENQDISDHRLEQRGLLHARIDVGGT 120 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP------ 158 + ++L + I++ + + L + + + + Sbjct: 121 EVHCFVVHLGLFAGSRGRQIQALTDRIRQSVPDGAPLLIVGDFNDWGDRLAPMFVQQLGL 180 Query: 159 QPHDCYNPIIWENDACFTLEVRQSFQKL----QNMGFTDAIRATHDTHHLYSFWDYYADS 214 + P D + + + N Y + Sbjct: 181 YEVFSHAPRSHGGDLPRLRDSVRRLGNVLRGVPNSVAVLERNNQLGMGGAY-CPLPPPRT 239 Query: 215 WSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 + R+D I + SAR+ R W + SDH+P++ L++P Sbjct: 240 FPAVFPWFRLDRIY-QRGFA--VRSARVLRG-REWARLSDHSPLLAELELP 286 >gi|317401442|gb|EFV82074.1| hypothetical protein HMPREF0005_00913 [Achromobacter xylosoxidans C54] Length = 288 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 41/306 (13%), Positives = 97/306 (31%), Gaps = 60/306 (19%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENN-------PDIICLQETK----------TEDK 43 MS++ V ++N++ R+ + + E PD++ LQE + + + Sbjct: 1 MSLIRVVSYNIHKGRSALGR-RDSLNELRLGLYGLRPDLVFLQEVQGRNEQKSLLDAQHE 59 Query: 44 NFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 + + Y ++ +G A+LS++ ++ D Q + AT ++ Sbjct: 60 SLAAALKLDVAYGRNAIRHETDHGNALLSRFPILDHENQDISDHRLEQRGLLHATIELDG 119 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 +++ ++L S + I+R + L + + + Sbjct: 120 RSVHCFVVHLGLFAGSRSRQILALTERIRRMVPDGEPILIAGDFNDWGDRLAPLFVQQLG 179 Query: 164 YNPIIWENDACFTLEVRQS-------------------------FQKLQNMGFTDAIRAT 198 + E+ + Q + + Sbjct: 180 LYEVFSHAPRSHGGELPRLRDSVKRLSNALRGLPNSGVSVLERTNQLGMDGSSRLLLPPP 239 Query: 199 HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVI 258 ++ ++ R+D I + SAR+ R W + SDH+P++ Sbjct: 240 RTFPAVFPWF-------------RLDRIY-QRGFA--VRSARVLRG-REWARLSDHSPLL 282 Query: 259 VSLDIP 264 L++P Sbjct: 283 AELELP 288 >gi|325955052|ref|YP_004238712.1| endonuclease/exonuclease/phosphatase [Weeksella virosa DSM 16922] gi|323437670|gb|ADX68134.1| Endonuclease/exonuclease/phosphatase [Weeksella virosa DSM 16922] Length = 343 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 85/261 (32%), Gaps = 23/261 (8%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 ++V ++N + IR +I +N DI+ QE +KNF + +Y+ E Sbjct: 106 LSVMSYNAHFIR--DDGTDQFIAKNLADIMMFQE--AYEKNFKSIEKELQSYYSEH---- 157 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 G+ PI + + + A T+R+ N+Y+ + Sbjct: 158 --YGLIAFFSKYPIIETKQINFPTQNNKGTAAYADIDTGKDTIRLVNIYMETMGVDKNLV 215 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + + ++++E + + + + L + Sbjct: 216 KSTIEAENSAQVEEKTKKIENKLIAGMLMHEKQLKEIMPYITKSPYPVLVGCDLNATPAS 275 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + Q + + + + + IRID++ S E +I Sbjct: 276 YEYQQLNAYLYDSFLQVGKGNATTF--HGFRFP----IRIDYLFHSKEFIP--IDGKIIR 327 Query: 244 KPRGWTKPSDHTPVIVSLDIP 264 K K SDH PVIV +P Sbjct: 328 K-----KFSDHYPVIVQYQLP 343 >gi|254000148|ref|YP_003052211.1| Endonuclease/exonuclease/phosphatase [Methylovorus sp. SIP3-4] gi|253986827|gb|ACT51684.1| Endonuclease/exonuclease/phosphatase [Methylovorus sp. SIP3-4] Length = 250 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 34/268 (12%), Positives = 73/268 (27%), Gaps = 27/268 (10%) Query: 1 MSVVTVATWNVN-SI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 + + VAT+N++ + R +H+ I+ D++ LQE +D++ Sbjct: 2 LPTLRVATFNIHKGLTSFNARLALHDQREMIRNLQADVVFLQEV--QDEH------HGNG 53 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 + + + + + + T I + Sbjct: 54 LRFKHWPAAGQTHFLADACGPNYAYGKNAVYPGGHHGNAVLSRFPILQSTTHDISAHEIE 113 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 + + + L F + I P++ D Sbjct: 114 QRGLLHCEIAIEGWPQTLHCICVHLGLLARWRFKQFGALRDYIHAVIPEDAPLVIAGD-- 171 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 F + ++ + + SF + R+D I + Sbjct: 172 FNDWRLSAGHQVMDGLNMREVFEHAHGKPARSFPSMFPL-------FRLDRIYVRGF--- 221 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 +HSA + PR SDH + L+ Sbjct: 222 NIHSAHVHGGPRTALT-SDHAALSAVLE 248 >gi|74025124|ref|XP_829128.1| DNA-(apurinic or apyrimidinic site) lyase [Trypanosoma brucei TREU927] gi|70834514|gb|EAN80016.1| DNA-(apurinic or apyrimidinic site) lyase, putative [Trypanosoma brucei] gi|261335080|emb|CBH18074.1| DNA-(apurinic or apyrimidinic site) lyase,putative [Trypanosoma brucei gambiense DAL972] Length = 572 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 7/55 (12%) Query: 4 VTVATWNVNS-------IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51 + + +WNV IR+ +A +++ DI+CLQE K + E Sbjct: 1 MFLISWNVAGWGSTARLIRSDFGTIAEFLRHTQADIVCLQEVKGSWQKLKDEPYA 55 Score = 47.9 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 17/40 (42%) Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 Y+ WD + N+G RID+I++ L R Sbjct: 390 CPCPYTCWDQSKNKRVVNEGNRIDYILIDASLAPKLAPCR 429 >gi|33594836|ref|NP_882479.1| putative endonuclease/exonuclease/phosphatase family protein [Bordetella parapertussis 12822] gi|33599108|ref|NP_886668.1| putative endonuclease/exonuclease/phosphatase family protein [Bordetella bronchiseptica RB50] gi|33564912|emb|CAE39857.1| putative endonuclease/exonuclease/phosphatase family protein [Bordetella parapertussis] gi|33575154|emb|CAE30617.1| putative endonuclease/exonuclease/phosphatase family protein [Bordetella bronchiseptica RB50] Length = 286 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 41/291 (14%), Positives = 90/291 (30%), Gaps = 32/291 (10%) Query: 1 MSVVTVATWNVNSIRA---RIHNLAAW---IKENNPDIICLQET----------KTEDKN 44 MS++ V ++N++ R+ R +L + PD++ LQE + ++ Sbjct: 1 MSLIRVVSYNIHKGRSALGRRESLNDLRLGLYGLRPDLVFLQEVQGRNEVSSVLHAQHES 60 Query: 45 FPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 Y + +G A+LS++ ++ D Q + A + Sbjct: 61 LAAALRLQAAYGRNAIRTGTDHGNALLSRFDILDHENQDISDHRLEQRGLLHARIDVGGT 120 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP------ 158 + ++L + I++ + + L + + + Sbjct: 121 EVHCFVVHLGLFAGSRGRQIQALTDRIRQSVPDGAPLLIAGDFNDWGDRLAPMFVQQLGL 180 Query: 159 QPHDCYNPIIWENDACFTLEVRQSFQKL----QNMGFTDAIRATHDTHHLYSFWDYYADS 214 + P D + + + N Y + Sbjct: 181 YEVFSHAPRSHGGDLPRLRDSVRRLGNVLRGVPNSVAVLERNNQLGMGGAY-CPLPPPRT 239 Query: 215 WSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 + R+D I + SAR+ R W + SDH+P++ L++P Sbjct: 240 FPAVFPWFRLDRIY-QRGFA--VRSARVLRG-REWARLSDHSPLLAELELP 286 >gi|124266264|ref|YP_001020268.1| hypothetical protein Mpe_A1072 [Methylibium petroleiphilum PM1] gi|124259039|gb|ABM94033.1| conserved hypothetical protein [Methylibium petroleiphilum PM1] Length = 270 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 34/282 (12%), Positives = 71/282 (25%), Gaps = 57/282 (20%) Query: 4 VTVATWNVN----SI----RARIHNLAAWIKENNPDIICLQETK---------------T 40 + VAT+N++ + R IHNL I+ + D++CLQE + Sbjct: 19 LRVATYNIHKGVRGVGPAKRLEIHNLGLAIEALDADLVCLQEVRRFHKRDARRFDRTSFG 78 Query: 41 EDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT 100 + E L Y + N + ++ + G+ Sbjct: 79 WPQQGQAEFLAPEGYDVAY----RTNAITRHGEHGNALLSRWSIGEPNHHDVSDHRFEQR 134 Query: 101 INTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP 160 L + + + S R ++ + + E Sbjct: 135 G---LLHVQVNWQGRAVDTIVAHFGLSHSSRLRQVQRLAAFVRQELDPAVPLLVAGDFND 191 Query: 161 HDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG 220 + + +++ F +Y+ +G Sbjct: 192 WGERLDGAMQEAGLRRAVAPSAKGLQRSLTFPSLAPVFA-LDRVYT------------RG 238 Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 R S + W + SDH P++ + Sbjct: 239 WR-------------CVSTFVPRGAT-WARMSDHLPLVAEFE 266 >gi|30260540|ref|NP_842917.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. Ames] gi|47525644|ref|YP_016993.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. 'Ames Ancestor'] gi|229601471|ref|YP_002864988.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. A0248] gi|30253908|gb|AAP24403.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. Ames] gi|47500792|gb|AAT29468.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. 'Ames Ancestor'] gi|229265879|gb|ACQ47516.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. A0248] Length = 263 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 33/271 (12%), Positives = 62/271 (22%), Gaps = 19/271 (7%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET------KTEDKNFPFETLQS 52 + + T N +S + +I LA I+E D++ LQE K N + Sbjct: 1 MKLLTLNCHSWQEENQIEKIKYLAKVIQEEEYDVVALQEVSQSIGAKNVCGNKKEDNFGL 60 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 L + + ++ + F + Sbjct: 61 LLLEELKALHVKDYNITWDFSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTTYWKTR 120 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 I + + L + + + Sbjct: 121 KIVSATIAYNGKNITFYSCHLGWWNDEEELFKGQVNRLMERVDSNELSFLMGDFNNNARL 180 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 E + WD +RID I+ + Sbjct: 181 QGEGYEYMMQEGLYDTYELAIEKDEGTTVQGEIAGWD------ENKHNLRIDLILCNRS- 233 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + S+++ SDH V V +DI Sbjct: 234 -EKIRSSKVVFNGTNRKIISDHFGVEVQVDI 263 >gi|212539053|ref|XP_002149682.1| zinc knuckle domain protein [Penicillium marneffei ATCC 18224] gi|210069424|gb|EEA23515.1| zinc knuckle domain protein [Penicillium marneffei ATCC 18224] Length = 1849 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 35/252 (13%), Positives = 62/252 (24%), Gaps = 38/252 (15%) Query: 30 PDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLD 89 D+I +QE + E P + Sbjct: 591 ADVIAIQE----------------PWRNEFTDTTHQPARTTHQLLYPKKTEHGDELPARV 634 Query: 90 VQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLI 149 T + + + + T Y I R R E+E+ Sbjct: 635 CMLISKRIDPARWTHAVISRDYQIVRIDTEWRTIYIHNIYNEPRGGTVMRLREEMEKINA 694 Query: 150 FAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWD 209 D + + W + ++ + + + + ++ Sbjct: 695 SDRDREHVILGDFNLHHPSWGGAGTQGDAEAEDLLEIMDSHDMEIVT----EPGVATW-- 748 Query: 210 YYADSWSKNKGIRIDHIMLSPEATSLLHSA----RIDTKPRGWTKPSDHTPVIVSLDIPE 265 D S ID ++S L S ID SDH P+ LDI Sbjct: 749 ERNDQRST-----IDLTLISNGLLERLVSCVRGDDIDHD-------SDHWPIQTVLDITV 796 Query: 266 PRKKQQDSTSQN 277 P+KK + + Sbjct: 797 PQKKSEKRRNWK 808 >gi|15072501|gb|AAK77971.1| pol protein [Drosophila melanogaster] Length = 1080 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 41/265 (15%), Positives = 81/265 (30%), Gaps = 36/265 (13%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 ++ +A WN I +I L +I + I+ + ET+ ++K+ E Y + Sbjct: 9 ILKIAFWNAGGINNKIDELKLFILNIDAHIVIVTETRLDNKSTKLELPGYFTYLAQNPVS 68 Query: 63 KSYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 GVA + + + + + ++ + I ++Y P + Sbjct: 69 SKRGGVATIVNSSIRHMALEPIEKECIQSAPIVLLPENNRRSEMIVIASVYCPPSLSWSP 128 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + L FA + L + I GD+N + E Q Sbjct: 129 HHF-------TDVLNFAEKTLGGQTKFILCGDWNAKH---RQWGCTRACQRGTALYEAVQ 178 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS--PEATSLLHSA 239 + + + A HDT S ID + + S Sbjct: 179 ADPMAEIIATGCATHFPHDTRKNPSA---------------IDFSICKGLGRLEKRISSV 223 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIP 264 SDH P+++ +++ Sbjct: 224 --------ADLSSDHLPILLEINLD 240 >gi|65317801|ref|ZP_00390760.1| COG3568: Metal-dependent hydrolase [Bacillus anthracis str. A2012] Length = 263 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 33/271 (12%), Positives = 62/271 (22%), Gaps = 19/271 (7%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET------KTEDKNFPFETLQS 52 + + T N +S + +I LA I+E D++ LQE K N + Sbjct: 1 MKLLTLNCHSWQEENQIEKIKYLAKVIQEEEYDVVALQEVSQSIGAKNVCGNKKEDNFGL 60 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 L + + ++ + F + Sbjct: 61 LLLEELKALHVKDYNITWDFSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTTYWKTR 120 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 I + + L + + + Sbjct: 121 KIVSATIAYNGKNITFYSCHLGWWNDEEELFKGQVNRLMERVDSNELSFLMGDFNNNARL 180 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 E + WD +RID I+ + Sbjct: 181 QGEGYEYMMQEGLYDTYELAIEKDEGTTVQGEIAGWD------ENKHNLRIDLILCNRS- 233 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + S+++ SDH V V +DI Sbjct: 234 -EKIRSSKVVFNGTNRKIISDHFGVEVXVDI 263 >gi|225463729|ref|XP_002264272.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 832 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 8/38 (21%), Positives = 20/38 (52%), Gaps = 2/38 (5%) Query: 4 VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETK 39 + + +WN + ++ + +++ PD++ QETK Sbjct: 1 MKIISWNTRGLGSKKKRRVVKDFLRSEKPDVVMFQETK 38 >gi|315446142|ref|YP_004079021.1| exonuclease III [Mycobacterium sp. Spyr1] gi|315264445|gb|ADU01187.1| exonuclease III [Mycobacterium sp. Spyr1] Length = 233 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 37/258 (14%), Positives = 78/258 (30%), Gaps = 35/258 (13%) Query: 5 TVATWNVN--SIRARIHNLAAWIKENNPDIICLQETKTED-KNFPFETLQSLNYHIETCG 61 +AT N+ ++ LA + + DI+ + E + + L + Y Sbjct: 4 RIATLNIRHGGTKSA-EALAGRLLGYDADILVVTEFRANAVGERLIDRLAQVGYDTSHPD 62 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +++ I+ F E+ + I Y+ + Sbjct: 63 VGVKENTVLIAARGGID-----------RSWAFTESLDRRHLWCTEIDGAYVCGVYMPQN 111 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 T + +R + L + + D + P+ E Sbjct: 112 TAKLPYWEALIDDVRPSGIDLLIGDFNTGNNDLDKAPR-----------GAKFIGPE--- 157 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +L G+TD R+ H YS++ + G R+D++ + + Sbjct: 158 MPGRLIASGYTDMWRSLHPDVREYSWFS-----RPGDNGFRLDYVFAGSDLAQRIRFCEF 212 Query: 242 DTKPRGWTKPSDHTPVIV 259 D PR + DH+ ++ Sbjct: 213 DHAPRTSGET-DHSGLVA 229 >gi|156402949|ref|XP_001639852.1| predicted protein [Nematostella vectensis] gi|156226983|gb|EDO47789.1| predicted protein [Nematostella vectensis] Length = 419 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 45/285 (15%), Positives = 88/285 (30%), Gaps = 39/285 (13%) Query: 4 VTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQET--KTEDKNFPFETLQSLN 54 + V T N I + R ++A + D++ LQE K++ + +L Sbjct: 14 LRVLTLNCWGIPFISKQVKERFEHIAKELSTGKYDVVALQEVWNKSDYAVMCDKLSSTLP 73 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVT------------HLPGDDLDVQARFIEATFTIN 102 Y + +G+ + S+Y+ T A + I Sbjct: 74 YSLYFYSGVIGSGMCVFSRYRITNSFTYRFSLNGYLYKLWHGDWLAGTSAGYCVIDHPIK 133 Query: 103 TQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD 162 + +L+ + N +++ +F + + + +I GD N P Sbjct: 134 PIHFFVSHLHAEY-NRQDDEYLAHRVTQAYQFAQLIELITKPSDCVIVCGDMNSEPTDLC 192 Query: 163 CYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR 222 LE + + +H++ +F A + GIR Sbjct: 193 YRILCNLPGLTDTWLE------CNKEGYHGNTYGVSHNSFAGSTF--QQAIQKGPSDGIR 244 Query: 223 IDHIMLSPE------ATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 ID+I + + +RI P SDH V+ + Sbjct: 245 IDYIFYRGDRSNMELLDCHVTMSRI---PWEEISYSDHEGVLATF 286 >gi|307566177|ref|ZP_07628632.1| endonuclease/exonuclease/phosphatase family protein [Prevotella amnii CRIS 21A-A] gi|307345142|gb|EFN90524.1| endonuclease/exonuclease/phosphatase family protein [Prevotella amnii CRIS 21A-A] Length = 365 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 37/285 (12%), Positives = 77/285 (27%), Gaps = 55/285 (19%) Query: 3 VVTVATWNV------NSIRARIHNLAAWIKENNPDIICLQET-----KTEDKNFPFETLQ 51 + + ++NV + + +I+ + +I + DI+CLQE K + Sbjct: 100 TIKILSYNVFLFDTWDDVSGQINPIVKYIVRSKADIVCLQEATLYTPKA--AKIMRYLKK 157 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 S Y + + + +LSK+ + ++ + T + Sbjct: 158 SYPYIDNIKKKTGTDDLMLLSKFPILHREIIPYPSKSNMSVAYYININGTKTLLVNNHFE 217 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 + + + + R +++ + + Sbjct: 218 SYGLSSNDKADFNNIIKGNVIGRDRINKFVSLVDKIGNTMARRAPQADAVATFVKKHLDK 277 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFW--------DYYADSWSKNKGI-- 221 + +D YS++ Y + G Sbjct: 278 NIP-----------------VILCGDFNDNPISYSYYTISKVLNDSYKSSG--NGIGWTY 318 Query: 222 -------RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 RIDHI S E A++D K SDH P+ Sbjct: 319 NENRMYFRIDHIFASNEFEPY--GAKVDKSI----KNSDHYPIYC 357 >gi|308044361|ref|NP_001183664.1| hypothetical protein LOC100502258 [Zea mays] gi|238013760|gb|ACR37915.1| unknown [Zea mays] Length = 369 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 44/289 (15%), Positives = 88/289 (30%), Gaps = 48/289 (16%) Query: 2 SVVTVATWNVNS------IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55 V + T+NV IR R++ + I+ ++PD+IC QE N + + ++ Sbjct: 82 KTVKIMTYNVWFREELELIR-RMNAIGDLIQHHSPDLICFQEI---TPNI-YLLFEKSDW 136 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + S + F F + + + Sbjct: 137 WQAYKCSLPHKMAMERS--------YYCMQMSRLPVKSFDRKPFLNSKMGRELCVADVTV 188 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 G I + Q E + + + I D + Sbjct: 189 GGSIELVLATSHLESPCPGPPTWDQMFSKERVAQASESLKTL----GAFRNAILCGDMNW 244 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW-SKNKGI--RIDHI------ 226 E F +N G+ DA +++ D A++ + N+ + R+D Sbjct: 245 DDEGDGPFPLPENGGWVDAWAELKPGEDGWTY-DTKANAMLTGNRKLQKRLDRFVCKLPD 303 Query: 227 -------MLSPEATSLLHSARIDTKPRGWTK-------PSDHTPVIVSL 261 M+ EA + + + K R + PSDH +++++ Sbjct: 304 FKVESVEMVGEEAIPRVTYVK-EKKARREIRQLVLPVLPSDHFGLVLTI 351 >gi|224539371|ref|ZP_03679910.1| hypothetical protein BACCELL_04276 [Bacteroides cellulosilyticus DSM 14838] gi|224519006|gb|EEF88111.1| hypothetical protein BACCELL_04276 [Bacteroides cellulosilyticus DSM 14838] Length = 370 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 43/272 (15%), Positives = 92/272 (33%), Gaps = 26/272 (9%) Query: 4 VTVATWNV-N--------SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ--- 51 + +AT+NV N S +A ++KE D++C QE ++K FP ++++ Sbjct: 111 LKIATYNVGNFGGEITGYS----CKEIARYMKEQEVDVLCFQEC-GDNKYFPMDSIRNVF 165 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 S + + S GV ++ + +V ++ + T+R+ N Sbjct: 166 SYWRYALIPTEDSIRGVLPIAVFSRYPLVNPQFISYQQSANCSMQCDIVLGRDTVRLLNN 225 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 +L + + + ++ R ++ ++ + Q ++ Sbjct: 226 HLQTTSVSQNRRKWERGLANSNDTRREAEVVQGAITSLHNNFVKRAEQTDSIRQLVV--- 282 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 + + + F L + + S Y + +RID+I SP Sbjct: 283 ASPYPVLACGDFNSLPSSYTYAELSDVLKDGFRTSGRGYMYTYRYFKRLLRIDYIFHSPG 342 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 SDH PV++ + I Sbjct: 343 IQ------GYRYYSPDLDLCSDHNPVLMEMKI 368 >gi|257870600|ref|ZP_05650253.1| endonuclease/exonuclease/phosphatase [Enterococcus gallinarum EG2] gi|257804764|gb|EEV33586.1| endonuclease/exonuclease/phosphatase [Enterococcus gallinarum EG2] Length = 255 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 40/275 (14%), Positives = 76/275 (27%), Gaps = 34/275 (12%) Query: 4 VTVATWNVNSIRA------------RIHNLAAWIKENNPDIICLQETK-TEDKNFPFETL 50 + VAT+N +R R + A I ++ DI+C+QE + T+ + T Sbjct: 1 MKVATYN---LRVDTDYDKEWQWSYRADKVLALIDYHDWDILCVQEVRPTQVADLARLT- 56 Query: 51 QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 +Y T + + Y + + + + + + LR+ Sbjct: 57 ---DYESVTAERDGDGTGEGIGIYYKKTMFSKVDSGSFWLSLTPDVPSIHPEAEYLRLCL 113 Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170 + + I L S+ E + Sbjct: 114 W------TVLRDRKGHDFLVIDTHLDNISEIARFEGMKVILERLADKIAALPVLLMGDLN 167 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230 +A + + + + Y +DY N+ ID+I + Sbjct: 168 AEAVERVHESLQTIFVNAKEQNEK--GHYGPRGSYQNFDYQL---PWNQLEEIDYIY-TK 221 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 + T PSDH P+ L E Sbjct: 222 GF--RIIKTGCLTDSCDGRFPSDHFPLEADLRFDE 254 >gi|147855242|emb|CAN79138.1| hypothetical protein VITISV_034815 [Vitis vinifera] Length = 1596 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 28/258 (10%), Positives = 68/258 (26%), Gaps = 55/258 (21%) Query: 4 VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + +WNV ++ + A I+ D+ CLQETK + Sbjct: 505 LRLLSWNVRGANDSSKRKVIKAMIRSQRVDLFCLQETKIQ-------------------- 544 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 S + S + G Sbjct: 545 --SMAEGVVRSLGTGRFLEWGASGCSWLCGWLRNVED----------------------- 579 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + + + + EE G ++ +N ++ + + + Sbjct: 580 -GFVWTFTGVYGPFSREDREAFWEELGAIRGIWSDPWCIGGDFNVVLSQRERSSQGRISG 638 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 + ++ + + + S+ + + R+D +++ I Sbjct: 639 AMRRFAQVVDDLELLDLPLQGGVVSW----SGGRNNQAWARLDRFLVTQCWLDKF--CGI 692 Query: 242 DTKPRGWTKPSDHTPVIV 259 + R SDH P+++ Sbjct: 693 V-QCRLSRPTSDHFPIML 709 >gi|126310825|ref|XP_001378942.1| PREDICTED: similar to sphingomyelin phosphodiesterase 2, neutral membrane (neutral sphingomyelinase) [Monodelphis domestica] Length = 614 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 43/289 (14%), Positives = 82/289 (28%), Gaps = 43/289 (14%) Query: 17 RIHNLAAWIKENNPDIICLQETKTED--KNFPFETLQSLNYHIETCGQKSYNGVAILSKY 74 R+ +L + + N D+ LQE +E ++ + L + + +G+ + SK+ Sbjct: 207 RMQHLGDLLNQKNFDLALLQEVWSERDFESLRQKLLPNYTWAHYFRSGFIGSGLCVFSKH 266 Query: 75 QPIEIVTHLPGDDLDVQARFIEATFT---INTQTLRIGNLYLPHGNPITSTKYDDKISWI 131 EI H + F + L I + + +Y+ + Sbjct: 267 PIQEIFQHTFSLNGYPYKLHHGDWFCGKAVGMVVLEICGILVNVYVTHLHAEYNREHDSY 326 Query: 132 KRFLRFASQRLELEEPLI--------FAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + L +GD N P W LE + Sbjct: 327 LAHRVAQAWELAQFIHHTSRRADVVLLSGDLNSHPGDVGYRLIKEWIGLDDSYLETQDFQ 386 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + S+ + G+RID+I+ + + T Sbjct: 387 GCEDGCTMVPNNCFVNSKEME---------SFPR--GVRIDYILF-KAISGFHITCDALT 434 Query: 244 KPRG-----------------WTKPSDHTPVIVSLDI-PEPRKKQQDST 274 G SDH ++ +L I P P + ++ T Sbjct: 435 TTTGSGPNDTTGSGPNDTTGHGLPLSDHEALMATLSIRPAPIEHNRNFT 483 >gi|218509998|ref|ZP_03507876.1| putative metal-dependent hydrolase protein [Rhizobium etli Brasil 5] Length = 242 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 36/272 (13%), Positives = 74/272 (27%), Gaps = 52/272 (19%) Query: 4 VTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQETKT---------EDKNFPFET 49 + + T+NV+S + +A+ I E DI+ LQE + Sbjct: 6 IKLLTYNVHSCIGNDRKLDPGRIASVIAEAGADIVALQEVDVLRRRTGGIDQAHLIASLL 65 Query: 50 LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 ++H + G AI++ + + + + + L + Sbjct: 66 KMQAHFHPALSIAEEQYGDAIITALPTSAVKAGPLPSIGEQRGALSVEVLVGDRKLLVVN 125 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 G + + +E P + GD+N +P Sbjct: 126 THLGLRGRER------IRQMTTLLNSGWLRGAMEEPLPCVLCGDFNALPSSATYRLVARS 179 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 DA + + + +R+DHI ++ Sbjct: 180 LKDAQLGGKAAP----------RATFPSRYPL-------------------MRLDHIFVT 210 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + + A + R SDH P+ + Sbjct: 211 DDLV--VKRAAVLQN-RLTKVASDHLPLFAEI 239 >gi|260910486|ref|ZP_05917155.1| AP endonuclease domain protein [Prevotella sp. oral taxon 472 str. F0295] gi|260635432|gb|EEX53453.1| AP endonuclease domain protein [Prevotella sp. oral taxon 472 str. F0295] Length = 362 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 38/248 (15%), Positives = 72/248 (29%), Gaps = 21/248 (8%) Query: 21 LAAWIKENNPDIICLQET----KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQP 76 + ++K + DI+CLQE K ++ YH Y+ +AI SKY Sbjct: 124 MLNYVKAKDADILCLQEANLGGKFQNT-IDSLLNSIYPYHDIKEKTTIYDRLAIYSKYP- 181 Query: 77 IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 I+ T+ + N + + + + K Sbjct: 182 --ILRSQRVMYPQSADFSQACWVATPDDTVLVINNHFATTGLTEAQRQNFKNMLKGDLRT 239 Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIR 196 L + D + ++ + + + Sbjct: 240 KQMPGLGKSLIHKLGEYAQVRAPQVDAVARFVRKHKGHSVILCGDFNDSPISYARHRMAK 299 Query: 197 ATHDTHHLYS---FWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253 D + Y+ +++ +RID+IM S + L ++ K K SD Sbjct: 300 ELTDCYVASGNGPGISYHRNAFY----VRIDNIMCSDDWQPL--KCVVENKV----KTSD 349 Query: 254 HTPVIVSL 261 H P+ L Sbjct: 350 HYPIFCQL 357 >gi|225430370|ref|XP_002282905.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 679 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 8/38 (21%), Positives = 20/38 (52%), Gaps = 2/38 (5%) Query: 4 VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETK 39 + + +WN + ++ + +++ PD++ QETK Sbjct: 1 MKIISWNTRGLGSKKKRRVVKDFLRSEKPDVVMFQETK 38 >gi|212711404|ref|ZP_03319532.1| hypothetical protein PROVALCAL_02477 [Providencia alcalifaciens DSM 30120] gi|212685860|gb|EEB45388.1| hypothetical protein PROVALCAL_02477 [Providencia alcalifaciens DSM 30120] Length = 297 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 50/280 (17%), Positives = 80/280 (28%), Gaps = 48/280 (17%) Query: 4 VTVATWNV--NSIRARIHNLAAW---IKENNPDIICLQET--------KT-EDKNFPFET 49 + VAT+N+ N + A + NL I + + D+I L E K + + Sbjct: 47 IKVATYNIGKNELAADVANLDELSKAIAKIDADVIVLTEIDNKTARSKKVNQLEEIAKAN 106 Query: 50 LQSLNYHIETCGQKSYNGVAILSKYQPI--EIVTHLPGDDLDVQARFIEATFTINTQTLR 107 + GV ILSKY+ ++V G + T + Sbjct: 107 KMDFAFGKALDFDGGEYGVGILSKYKIEKSQVVNLPSGGAEQRVVLLSQITKPGFDSPII 166 Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167 I G + K R + A+ A I+ + Sbjct: 167 IM------GTHLDWQKDPTIRIGQVRHILDATIGDTETGFDNIAASIKILAGDFNSTAKE 220 Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227 + + Y W + IDHI Sbjct: 221 QPIEEISYF------------------WNPVEKKGVNYRTWPAVNPAID------IDHIF 256 Query: 228 LSPEATSLLHSARI--DTKPRGWTKPSDHTPVIVSLDIPE 265 + + I D+K W+K SDH PVI L++ E Sbjct: 257 TYKGQVWDVKNMTIPTDSKDFQWSKVSDHLPVIAELELQE 296 >gi|86141529|ref|ZP_01060075.1| hypothetical protein MED217_05907 [Leeuwenhoekiella blandensis MED217] gi|85832088|gb|EAQ50543.1| hypothetical protein MED217_05907 [Leeuwenhoekiella blandensis MED217] Length = 285 Score = 54.8 bits (130), Expect = 1e-05, Method: Composition-based stats. Identities = 45/270 (16%), Positives = 85/270 (31%), Gaps = 27/270 (10%) Query: 6 VATWNV------NSIRARIHNLAAWIKE----NNPDIICLQETKTEDKNFPFETLQSLNY 55 ++++N+ + I W+ + D+I QE T + E L Sbjct: 28 ISSFNIRYNSPDDGINIWEQR-KDWLTHSIRFHQADLIGTQEV-THTQLLDMEVLLPNYA 85 Query: 56 HIETCGQKSYNG--VAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 H+ + + G AI K + E++ + + + L+ Sbjct: 86 HVGIGREGATQGEYSAIFYKKERFEVLDSNTFWLSETPDVVASKGWDAALPRIVTWALFK 145 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + ++ ++ + R AS L ++ G P + +A Sbjct: 146 DKHSGVSFFHFNTHFDHRGKQARIASAALLTQKIKEITGT---SPVLLTGDFNSSPKTEA 202 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 TL N+ + + WD A + + RID+I S Sbjct: 203 IATLLSSGLKDPYLNLDADQIYGPEYSANG----WD--ATGRTSDS--RIDYIFYSGGVQ 254 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 L +I RG SDH PVI +++ Sbjct: 255 PLTL--QILDGQRGERYISDHFPVIAKVEL 282 >gi|147859657|emb|CAN81035.1| hypothetical protein VITISV_011008 [Vitis vinifera] Length = 1016 Score = 54.8 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 33/246 (13%), Positives = 63/246 (25%), Gaps = 51/246 (20%) Query: 15 RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKY 74 R + + A I+ D++CLQETK ++ GV Sbjct: 356 RNKRKVIKALIRSQKVDVVCLQETKIQE---------------------MSQGVIHSLGV 394 Query: 75 QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRF 134 + + L +G + + + I Sbjct: 395 GRFLGWGAVNARGAAGGVVVFWDKRVLELVGLEVGIFSISCRFKNCEDGFMWFFTGIYGP 454 Query: 135 LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDA 194 + R + GD+N+I P + E Sbjct: 455 TLKSVIRGLWSDHWCIGGDFNVIRFPSERSREGRLSGSMRRFSE---------------- 498 Query: 195 IRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDH 254 Y++ + + R+D ++S + + T PR SDH Sbjct: 499 -------GGPYTW----SGGLNGQSRSRLDRFLISEDWKNHFSGMSQCTLPR---PVSDH 544 Query: 255 TPVIVS 260 P+++ Sbjct: 545 FPILLD 550 >gi|225463574|ref|XP_002268710.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1482 Score = 54.8 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 29/246 (11%), Positives = 62/246 (25%), Gaps = 30/246 (12%) Query: 16 ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75 ++ + A I+ D+ CLQETK + ++SL + Sbjct: 384 SKRKVIKALIRSQRVDVFCLQETKIQA--MSEGVVRSLG----------TGRFLGWGALE 431 Query: 76 PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135 + ++ + + R+ N+ T + Sbjct: 432 ASGSAGGILVCWDRRTLDVLDVEVGQFSISCRVRNVEDGFCWMFTGVYGPFSRDERECLW 491 Query: 136 RFASQRLE-LEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDA 194 + P GD+NI + A +L ++ Sbjct: 492 EELGAIRGLWDVPWCLGGDFNITLLQGERSRQGRITG-AMRRFAQMVDELELTDLPLQGG 550 Query: 195 IRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDH 254 + S+ R+D +++ + R SDH Sbjct: 551 RCTWNGGRGSQSW-------------ARLDRFLVTQNWLDHFSGVV---QSRLPRPTSDH 594 Query: 255 TPVIVS 260 P+++ Sbjct: 595 FPILLE 600 >gi|300771475|ref|ZP_07081350.1| endonuclease/exonuclease/phosphatase [Sphingobacterium spiritivorum ATCC 33861] gi|300761464|gb|EFK58285.1| endonuclease/exonuclease/phosphatase [Sphingobacterium spiritivorum ATCC 33861] Length = 279 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%) Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 RIDHI ++P+ + I T PSDH PV+V L Sbjct: 239 RIDHIFITPQF--SVKKYGILTDTYVGKYPSDHFPVMVDL 276 >gi|301627871|ref|XP_002943090.1| PREDICTED: hypothetical protein LOC100497457 [Xenopus (Silurana) tropicalis] Length = 1247 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 31/74 (41%), Gaps = 10/74 (13%) Query: 188 NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRG 247 + D R + ++F+ + + G RID+I+ + + A I G Sbjct: 325 HTNLRDVWRILNPFSKEFTFYSHSHGT-----GTRIDYILTPTNLLTHVSDATI-----G 374 Query: 248 WTKPSDHTPVIVSL 261 SDHTP+ +++ Sbjct: 375 NFTYSDHTPISITI 388 >gi|170764194|ref|ZP_02634166.2| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens E str. JGS1987] gi|170660566|gb|EDT13249.1| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens E str. JGS1987] Length = 262 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 47/276 (17%), Positives = 79/276 (28%), Gaps = 28/276 (10%) Query: 1 MSVVTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51 M + V T+N+ N R + IK++ PDII QE + + L Sbjct: 1 MRNLKVMTFNLKYDFKAQDNNEWSQRCLRITKLIKDHLPDIIGTQEGLIHMLDDMDDLLD 60 Query: 52 SLNY---HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108 ++ E G+ +N + L + + ++ ++ Sbjct: 61 EYSWVGEDREGNGKDEFNAIFFLKNKFEVLEWNQFWLSKTPNIKGSKDFNSSLPRICTKL 120 Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL-EEPLIFAGDYNIIPQPHDCYNPI 167 G I L+ ++ II +CY Sbjct: 121 KLKDKISGLKIDIYNTHLDHESELAREEGIKIILKEVKKNYKIYKTPYIIMGDFNCYLED 180 Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227 N F + + + H Y G ID+I+ Sbjct: 181 NLFNIIREEETNNTCFNVCYDNIKNNILGTFHYFKGGY-------------DGRIIDYIL 227 Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 S E + S ID + PSDH PVI L++ Sbjct: 228 YSKEYE--IKSLNIDDRKINRGYPSDHYPVICELEL 261 >gi|255536608|ref|YP_003096979.1| AP endonuclease domain protein [Flavobacteriaceae bacterium 3519-10] gi|255342804|gb|ACU08917.1| AP endonuclease domain protein [Flavobacteriaceae bacterium 3519-10] Length = 325 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 41/260 (15%), Positives = 71/260 (27%), Gaps = 30/260 (11%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + T N+ + ++ + D++ QE L Y T + Sbjct: 95 LKIVTMNIKGGGYGREAIYEYLNTSGADVVLAQE--------HMGELSVPGYSHRTDTYE 146 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 + +I T G+ R T L + P Sbjct: 147 LTALNSKTEILHQEKIKTSENGEAFFADIRINGKTIRFVNIYLNPFSFDKSKVKPSEDYD 206 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + + + + +E + P P N + E Q Sbjct: 207 KNKRKLRYILSTLIPTFKAHQDEVSVIKKTIAESPYPVIVAGDF---NAVPNSYEYYQLS 263 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + L+++ + SF DY IRID++ S E T +D Sbjct: 264 ENLKDVFVETGNGNST------SFHDYKIP-------IRIDYVFCSEEITP--VRYTVDR 308 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 K SDH P+I I Sbjct: 309 ----RAKMSDHYPIIAEFKI 324 >gi|297154471|gb|ADI04183.1| hypothetical protein SBI_01062 [Streptomyces bingchenggensis BCW-1] Length = 297 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 43/272 (15%), Positives = 79/272 (29%), Gaps = 26/272 (9%) Query: 4 VTVATWNV--------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN- 54 + V T+N+ NS R + ++ P ++ QE + L Sbjct: 41 LRVMTFNLRFASDTEPNSWAQRRPAMRELLRREAPQLLGTQE--GLYGQL-RDIAHDLGP 97 Query: 55 -YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 Y G+ + ++ + + L D + + ++ Sbjct: 98 RYDWLGTGRAGGSRDEFMAVFYDTNRLEPLEYDHFWLSDTPYVIGSNTWGGAVVRMVTWV 157 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + T ++ + + + A +R G +P+ + + Sbjct: 158 RFHDLRTGGQFYALNTHLDHRSQPARERAAALITERLGGLDAALPRIVTGDFNVAAHGN- 216 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY-SFWDYYADSWSKNKGIRIDHIMLSPEA 232 L D+ A Y +F Y G RID I+ SP Sbjct: 217 ------PVYDAMLGGGTLVDSWDAAERRSAQYATFHGYRPLVPD---GDRIDWILTSPTV 267 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 H A I+ R PSDH PV + +P Sbjct: 268 --HTHYAAINPYSRDGQFPSDHLPVQAVMQLP 297 >gi|255536406|ref|YP_003096777.1| hypothetical protein FIC_02282 [Flavobacteriaceae bacterium 3519-10] gi|255342602|gb|ACU08715.1| hypothetical protein FIC_02282 [Flavobacteriaceae bacterium 3519-10] Length = 302 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 33/275 (12%), Positives = 75/275 (27%), Gaps = 37/275 (13%) Query: 4 VTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 + V T+N+ NS R + + +PD++ +QE + Sbjct: 48 LKVMTYNIRLALDSDKENSWENRKTDALKLLNYYHPDVLGVQE--AVPQQMSDLKNGLAG 105 Query: 55 YHIETCGQKSYNGVAILSKYQP----IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 Y+ G+ + S ++++ + + + + Sbjct: 106 YNFVGVGRDDGSNKGEYSAIFFDTAKLQVLQSGTFWLSETPEKPSKGWDAAYNRICTFAL 165 Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170 G + + ++ L + N P Sbjct: 166 FKTKKGRRKFW-----AFNVHFDHVGNIAREKSAALILSKIKELNTKNLPVILTGDFNLT 220 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG--IRIDHIML 228 + + + + + + + ++ ++ ++ NK RID+I + Sbjct: 221 DKTTPMKILSE----NLSDTYRNCAQPSYGPTGTFT-------AFDVNKIPTERIDYIFI 269 Query: 229 SPEATSLLHSARIDTKPR-GWTKPSDHTPVIVSLD 262 S R R PSDH PV+ L Sbjct: 270 -KHL--KCKSHRTINDRRENLLYPSDHFPVMAELK 301 >gi|225867840|ref|YP_002743788.1| hypothetical protein SZO_02270 [Streptococcus equi subsp. zooepidemicus] gi|225701116|emb|CAW97970.1| hypothetical protein SZO_02270 [Streptococcus equi subsp. zooepidemicus] Length = 261 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 33/131 (25%), Positives = 53/131 (40%), Gaps = 7/131 (5%) Query: 1 MSVVTVATWNVN---SI-RARIHNLAAWIKENNPDIICLQE-TKTEDKNFPFETLQSLNY 55 M+ +TV+TWN+N + R + +++ N DIICL E KTE N LQ + Y Sbjct: 10 MTQLTVSTWNINQRSGLGRQIPDMVVTELRQLNADIICLTEYVKTESHNLFCARLQDIGY 69 Query: 56 HIETCGQ--KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 + + + N + + K I D+ D F+ T I + L I + Sbjct: 70 EVFEDDRSLEFGNEILVAIKSSLISDSKFTTIDNDDSNPNFLRVTVNIFGKELNIVGTRI 129 Query: 114 PHGNPITSTKY 124 G + Sbjct: 130 KTGGKDIIEDF 140 >gi|113866485|ref|YP_724974.1| metal-dependent hydrolase [Ralstonia eutropha H16] gi|113525261|emb|CAJ91606.1| Metal-dependent hydrolase [Ralstonia eutropha H16] Length = 260 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 36/287 (12%), Positives = 74/287 (25%), Gaps = 45/287 (15%) Query: 4 VTVATWNVN----SI--RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57 + V T+N++ I R RI N+ A + + DI+ LQE + + L Sbjct: 3 LRVVTYNIHKGVTGISRRPRIQNVRAGLHAMDADIVFLQEVQDRNDRLVAAAL------- 55 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 + + Y + D + + ++ L I + Sbjct: 56 -FDPEHTQLNYLATDAYPHSVYGRNAVYDYGHHGNAILSRHPILMSENLDISDHRFEQRG 114 Query: 118 PITSTKYDDKISWIKRFLRFASQRL-ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + + + + F + + + ND Sbjct: 115 LLHAVADVHGVETHLICVHFGLFARSRVRQAEALVERVRTVVPAGMPLVIAGDFNDWNHR 174 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 L+ + H +W +D I + Sbjct: 175 LDAQICNTLGAVEASHARGARLHTFPSHMPWWQ-------------LDRIY--------V 213 Query: 237 HSARIDTKP----RGWTKPSDHTPVIVSL-----DIPEPRKKQQDST 274 I+ R W + SDH P++ L ++ P + + Sbjct: 214 RGYEIERAHALTGRDWAQRSDHVPLVAELGHPRGELAMPAEPAGKAA 260 >gi|118579337|ref|YP_900587.1| endonuclease/exonuclease/phosphatase [Pelobacter propionicus DSM 2379] gi|118502047|gb|ABK98529.1| Endonuclease/exonuclease/phosphatase [Pelobacter propionicus DSM 2379] Length = 354 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 45/264 (17%), Positives = 76/264 (28%), Gaps = 24/264 (9%) Query: 4 VTVATWNV----NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 + V TWNV + L I NPDI+ Q + +L + Sbjct: 104 LRVMTWNVKYCSRG-KLAQQALKDDIARANPDIVLFQ-------DAGGVMQGALGSYFAK 155 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 S I S++ E Q F I + + + N++ Sbjct: 156 WHFHSQEQFVIASRFPLEETEILPISRPSGKQKTFARYRVKIGSTPVSLYNIHFESPREG 215 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 S + + + + I ++ + + + + Sbjct: 216 LSAV---GSARKRPWYLPKGIQRFERNVSIRLSQARMVQEFISQEKGPVIIGGDLNSPDA 272 Query: 180 RQSFQKLQNMGFTDAI--RATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 Q L++ G DA + F W + +RIDH+M+S Sbjct: 273 SQVCAGLRDAGLHDAFAEGGRGYGYTYGHFLLQRRLPWMRVSWMRIDHVMMSSHF--KAL 330 Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261 R G + SDH PVI L Sbjct: 331 GCR-----TGTGEASDHRPVIADL 349 >gi|239817089|ref|YP_002945999.1| endonuclease/exonuclease/phosphatase [Variovorax paradoxus S110] gi|239803666|gb|ACS20733.1| Endonuclease/exonuclease/phosphatase [Variovorax paradoxus S110] Length = 250 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 41/285 (14%), Positives = 80/285 (28%), Gaps = 68/285 (23%) Query: 4 VTVATWNVN----SI----RARIHNLAAWIKENNPDIICLQETKTEDKN----------F 45 + VAT+N++ I R IHNL I++ + DI+CLQE + ++ Sbjct: 8 LRVATYNIHKGVQGIGLARRLEIHNLGHAIEQLDADIVCLQEVRKMNRQAALRFERWPEL 67 Query: 46 P-FETLQSLNYHIETCGQ----KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT 100 P + L Y +G A+L+++ I D Q + Sbjct: 68 PQADFLAPEGYTAVYETNAITRHGEHGNALLTRWPVIRTGHQDISDHRFEQRGLLHVVIE 127 Query: 101 INTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP 160 + + + ++L + +I+R + + + + Sbjct: 128 VEGRPVHAIVVHLGLIKGSRVRQVARLREFIEREVPPGEAVVVAGDFNDWGARMRYAMNA 187 Query: 161 HDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG 220 + T + Sbjct: 188 MGLRDTSDLRG------------------PRTLTYPSRLPVAQ----------------- 212 Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRG--WTKPSDHTPVIVSLDI 263 +D + E + S PRG W + SDH P++ + Sbjct: 213 --LDFVYG-RELEPVACSV-----PRGPIWARMSDHLPLVADFAL 249 >gi|308813431|ref|XP_003084022.1| Glucose-repressible alcohol dehydrogenase transcriptional effector CCR4 and related proteins (ISS) [Ostreococcus tauri] gi|116055904|emb|CAL57989.1| Glucose-repressible alcohol dehydrogenase transcriptional effector CCR4 and related proteins (ISS) [Ostreococcus tauri] Length = 603 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 39/279 (13%), Positives = 78/279 (27%), Gaps = 48/279 (17%) Query: 15 RARIHNLAAWIKENNPDIICLQETKTEDKN--------FP--FETLQSLNY---HIETCG 61 ++R+ +I+E + D++CLQE D + P L+S Y H+ Sbjct: 336 KSRLTRTREYIRELDADVLCLQELDGYDDDGSAVTSTSLPSWRSWLESEGYDSRHVRRTN 395 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARF---------------IEATFTINTQTL 106 K + + + + E L Sbjct: 396 TKKDGSCVAWRRNAFTCVDHRAVSYNDIAHEMYSKSDNGDVDDERSDERERYLRDCVANL 455 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 + + + + ++RL +EE F + + Sbjct: 456 TVLKRMRDGAEVLVCSTHIFWDPQYSDVKVQQAKRL-VEECERFVDERASAGSDVRPHVI 514 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226 I + ++ +V + + + A + ++ ID+I Sbjct: 515 IGGDFNSEPDSDVYRVMTATFSSASSGREPAFTNVTPSFTAC--------------IDYI 560 Query: 227 MLSPEATSLLHSARIDTKPRG-----WTKPSDHTPVIVS 260 +S T + + G T PSDH PV+V Sbjct: 561 FVSDGITVTRVKEQPRRETLGEGLPNETHPSDHLPVVVD 599 >gi|228913117|ref|ZP_04076756.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228846522|gb|EEM91535.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 263 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 33/271 (12%), Positives = 61/271 (22%), Gaps = 19/271 (7%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET------KTEDKNFPFETLQS 52 + + T N +S + +I LA I+E D+I LQE K N + Sbjct: 1 MKLLTLNCHSWQEENQIEKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGL 60 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 L + + ++ + F + Sbjct: 61 LLLEELKALHVKDYNITWDFSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTTYWKTR 120 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 I + + + + + Sbjct: 121 KIVSATIAYNGKNITFYSCHLGWWNDEEESFKGQVNRLMERVDSNELSFLMGDFNNNARL 180 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 E + WD +RID I+ + Sbjct: 181 QGEGYEYMMQEGLYDTYELAIEKDEGTTVQGEIAGWD------ENKHNLRIDLILCNRS- 233 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + S+++ SDH V V +DI Sbjct: 234 -EKIRSSKVVFNGTNRKVISDHFGVEVQVDI 263 >gi|225438167|ref|XP_002262729.1| PREDICTED: hypothetical protein, partial [Vitis vinifera] Length = 1167 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 26/246 (10%), Positives = 66/246 (26%), Gaps = 30/246 (12%) Query: 16 ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75 ++ + +I+ D++C+QETK ++ G+ Sbjct: 441 SKRKIIKNYIRNQRVDLMCIQETKIQE---------------------MSEGIVRSLGSG 479 Query: 76 PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135 L + + G L + + Sbjct: 480 RFLDWRALNAEGAAGGILICWDKRVLEILDWEEGQFSLSCRFKTIENGATWAFTGVYGPF 539 Query: 136 RFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAI 195 + EE G ++ +N +++++ + + ++ + Sbjct: 540 TKVEREGMWEELGAIRGLWDDPWCLGGDFNITLFQHERSSQRRISSAMRRFAEFVDDLEL 599 Query: 196 RATHDTHHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDH 254 +++ N+ R+D ++SP T+ R SDH Sbjct: 600 VDLPLQGGEFTW-----SGGLNNQAWARLDRFLVSPSWLDQFSGI---TQGRLSRPTSDH 651 Query: 255 TPVIVS 260 P+++ Sbjct: 652 FPIVLE 657 >gi|147821733|emb|CAN61672.1| hypothetical protein VITISV_040429 [Vitis vinifera] Length = 319 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 22/40 (55%), Gaps = 2/40 (5%) Query: 4 VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTE 41 + + +WNV ++ + +I+ D+IC+QETK + Sbjct: 167 MKILSWNVRGANDSSKRKVIKTFIRNQRVDVICIQETKIQ 206 >gi|147838572|emb|CAN74312.1| hypothetical protein VITISV_037520 [Vitis vinifera] Length = 1915 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 40/260 (15%), Positives = 81/260 (31%), Gaps = 34/260 (13%) Query: 5 TVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WN + +R + ++ NPD++ QETK + Sbjct: 738 KILSWNTRGLGSRKKRRTVRRFLSTQNPDVVMFQETK--------REIWDRRLVSSIWKG 789 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 KS + VA+ + I L +F + + + ++ + G+ S+ Sbjct: 790 KSLDWVALPACGASGGI------VILWDSVKFNCSEKVLGSFSVTVKLNSDEEGSFWLSS 843 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFA--GDYNIIPQPHDCYNPIIWENDACFTLEVR 180 Y + Q L + GD+N+I + + + E Sbjct: 844 VYGPNKEVWREDFWLELQDLHGLTFPRWCVGGDFNVIRRISEKMGDSRLTVNMRRFDEFI 903 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + + + +++ + D K R+D + E S Sbjct: 904 ---------RESGLLDPXPLRNAAFTWSNMQVDPICK----RLDRFLFXAEW-DSFFSQN 949 Query: 241 IDTKPRGWTKPSDHTPVIVS 260 I WT SDH+P+ + Sbjct: 950 IQEALPXWT--SDHSPICLE 967 >gi|74011366|ref|XP_852055.1| PREDICTED: similar to LINE-1 reverse transcriptase homolog [Canis familiaris] Length = 1402 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 54/265 (20%), Positives = 88/265 (33%), Gaps = 36/265 (13%) Query: 21 LAAWIKENN----PDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQP 76 + + E N P I CLQET K+ ++ + G + GVAIL + Sbjct: 141 IFRVLNEKNMQPRPSICCLQETHFRQKDTYSLKIKGWRTIYHSNGPQKKAGVAILISDKL 200 Query: 77 IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 D + +I +I + L I N+Y P+ Sbjct: 201 KFTPK---TVVRDEEGHYIILKGSIQQEDLTILNIYAPNVGAAKYINQ-----------L 246 Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIR 196 + L+ + GD+N+ D + E R L M FTD R Sbjct: 247 LTKVKKYLDNNTLILGDFNLALSILDRSSKHNIFK------ETRALNDTLNQMDFTDIYR 300 Query: 197 ATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTP 256 H Y+F+ ++S RIDHI+ + I SDH Sbjct: 301 TLHPNSTEYTFFSSAHGTFS-----RIDHILGHKSGLNRYQKIGIVPCI-----FSDHNA 350 Query: 257 VIVSLDIPEPRKKQQDSTSQNMKPI 281 + + L+ +K + S + ++ I Sbjct: 351 LKLELN--HNKKFGRTSNTWRLRTI 373 >gi|294777627|ref|ZP_06743078.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides vulgatus PC510] gi|319640218|ref|ZP_07994944.1| hypothetical protein HMPREF9011_00541 [Bacteroides sp. 3_1_40A] gi|294448695|gb|EFG17244.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides vulgatus PC510] gi|317388205|gb|EFV69058.1| hypothetical protein HMPREF9011_00541 [Bacteroides sp. 3_1_40A] Length = 359 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 48/275 (17%), Positives = 87/275 (31%), Gaps = 40/275 (14%) Query: 4 VTVATWNV-----NSIRARIHN----LAAWIKENNPDIICLQET----KTEDKNFPFETL 50 + ++N N RA + + +++ +N DIICLQE + K + L Sbjct: 101 IKFLSYNTMAFEKN--RANTKDNPNPVLEYLRNSNADIICLQEYIVGGRLTKKEVDY-AL 157 Query: 51 QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 + Y NG+ S++ I++ P + I +N TL + N Sbjct: 158 RDYPYK-NYHKISGANGLGCYSRFP---ILSAHPVKYASLNNGSIAYKIKVNGDTLLVVN 213 Query: 111 LYLPHGNPITSTKYDDK-ISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 +L K + + + + L L A + + Sbjct: 214 NHLESNKLTEKDKEVYREMMKDPDKQKVSQGSRLLIRKLAEASAIRAVQADSIARLVAGY 273 Query: 170 EN-----DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRID 224 + F ++ G DA + + + Y + + RID Sbjct: 274 KGGGIIVCGDFNDSPISYTHRVVGEGLNDAFVESGNGFGI----SYNQNHFY----FRID 325 Query: 225 HIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 +I+LS S +D K SDH P+ Sbjct: 326 NILLSKNLKSY--RCTVDNTI----KSSDHYPIWC 354 >gi|228983625|ref|ZP_04143829.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228776110|gb|EEM24472.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 263 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 33/271 (12%), Positives = 61/271 (22%), Gaps = 19/271 (7%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET------KTEDKNFPFETLQS 52 + + T N +S + +I LA I+E D+I LQE K N + Sbjct: 1 MKLLTLNCHSWQEENQIEKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGL 60 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 L + + ++ + F + Sbjct: 61 LLLEGLKALHVKDYNITWDFSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTTYWKTR 120 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 I + + + + + Sbjct: 121 KIVSATIAYNGKNITFYSCHLGWWNDEEESFKGQVNRLMEHVDSNEISFLMGDFNNNARL 180 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 E + WD +RID I+ + Sbjct: 181 QGEGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWD------ENKHNLRIDLILCNRS- 233 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + S+++ SDH V V +DI Sbjct: 234 -EKVRSSKVIFNGTNRNIISDHFGVEVQVDI 263 >gi|221114087|ref|XP_002160728.1| PREDICTED: similar to pol-like protein [Hydra magnipapillata] Length = 348 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 5/46 (10%) Query: 1 MSVVTVATWNVNSI---RARIHNLAAWIKENNPDIICLQETKTEDK 43 M+V + T+NVN + R R H + ++ + +IIC+QE + Sbjct: 1 MAV-KILTFNVNGLNEDRKR-HQIIRYLANLDCNIICIQEIHCTSE 44 >gi|13472690|ref|NP_104257.1| hypothetical protein mll3063 [Mesorhizobium loti MAFF303099] gi|14023437|dbj|BAB50043.1| mll3063 [Mesorhizobium loti MAFF303099] Length = 302 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 38/306 (12%), Positives = 78/306 (25%), Gaps = 53/306 (17%) Query: 4 VTVATWNV------NSIR---ARIHNLAAWIKENNPDIICLQET--KTEDKNFPF--ETL 50 + + ++N+ + R +R + DII LQE + F E L Sbjct: 1 MKLVSYNIQYGFGSDG-RYDLSRAARIVD-----GADIIALQEVERHWQRSRFDDQPELL 54 Query: 51 QSL--NYHIETCGQKSYNG--------------VAILSKYQPIEIVTHLPGDDLDVQARF 94 L YH + + + + + L + R Sbjct: 55 SRLLSGYHWVYGPAFDMDASERRDGRLINRRRQFGTMVLSKLPIVWSRLHALPMRRTLRP 114 Query: 95 IEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRL------ELEEPL 148 + +R + + + ++ +L +R Sbjct: 115 LNTRNAALECMIRTPAGPVRVLSLHLAHIAAEERLEQIDYLLAEHRRAPSEGGPWSGIDD 174 Query: 149 IFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFW 208 + ++ + IW D + + + + + Sbjct: 175 EPSRNWTSGEIEPENPLAAIWMGDFNMEPGSAEYRRIVGRTPYHRGAAYLDGFVDAAAVA 234 Query: 209 DYYADSWSKN--------KGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 A + + R+DH + + S R D SDH PV V Sbjct: 235 IELAGDFHTHEKIIDGRLAKRRLDHCFVGGVFARRVRSVRSDIGEM----ASDHFPVRVD 290 Query: 261 LDIPEP 266 +D+ P Sbjct: 291 IDLETP 296 >gi|227536399|ref|ZP_03966448.1| endonuclease/exonuclease/phosphatase family protein [Sphingobacterium spiritivorum ATCC 33300] gi|227243775|gb|EEI93790.1| endonuclease/exonuclease/phosphatase family protein [Sphingobacterium spiritivorum ATCC 33300] Length = 279 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%) Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 RIDHI ++P+ + I T PSDH PV+V L Sbjct: 239 RIDHIFITPQF--SVKKYGILTDTYVGKYPSDHFPVMVDL 276 >gi|212692207|ref|ZP_03300335.1| hypothetical protein BACDOR_01703 [Bacteroides dorei DSM 17855] gi|237711516|ref|ZP_04541997.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|237726027|ref|ZP_04556508.1| conserved hypothetical protein [Bacteroides sp. D4] gi|265752941|ref|ZP_06088510.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|212665084|gb|EEB25656.1| hypothetical protein BACDOR_01703 [Bacteroides dorei DSM 17855] gi|229435835|gb|EEO45912.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4] gi|229454211|gb|EEO59932.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|263236127|gb|EEZ21622.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] Length = 359 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 48/275 (17%), Positives = 85/275 (30%), Gaps = 40/275 (14%) Query: 4 VTVATWNV-----NSIRARIHN----LAAWIKENNPDIICLQET----KTEDKNFPFETL 50 + ++N N RA + + +++ +N DIICLQE + K + L Sbjct: 101 IKFLSYNTMAFEKN--RANTKDNPNPVLEYLRNSNADIICLQEYIVGGRLTKKEVDY-AL 157 Query: 51 QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 + Y +G L Y I++ P + I +N TL + N Sbjct: 158 RDYPYKNYY----KISGANGLGCYSRFPILSAHPVRYASLNNGSIAYKIKVNGDTLLVVN 213 Query: 111 LYLPHGNPITSTKYDDK-ISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 +L K + + + + L L A + + Sbjct: 214 NHLESNKLTEKDKEVYREMMKDPDKQKVSQGSRLLIRKLAEASAIRAVQADSIARLVAGY 273 Query: 170 EN-----DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRID 224 + F ++ G DA + + + Y + + RID Sbjct: 274 KGGGIIVCGDFNDSPISYTHRVVGEGLNDAFVESGNGFGI----SYNQNHFY----FRID 325 Query: 225 HIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 +I+LS S +D K SDH P+ Sbjct: 326 NILLSKNLKSY--RCTVDNTI----KSSDHYPIWC 354 >gi|218681503|ref|ZP_03529390.1| hypothetical protein RetlC8_22861 [Rhizobium etli CIAT 894] Length = 242 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 40/272 (14%), Positives = 77/272 (28%), Gaps = 52/272 (19%) Query: 4 VTVATWNVNS-IRARIH----NLAAWIKENNPDIICLQETKT---------EDKNFPFET 49 + + T+NV+S I + +A+ I E DI+ LQE + Sbjct: 6 IKLLTYNVHSCIGSDRKLDPGRIASVIAEAEADIVALQEVDVSRRRTGGVDQAHAIASPL 65 Query: 50 LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 ++H + G AI++ + + + + + L + Sbjct: 66 KMQAHFHPALSIAEEQYGDAIITALPTGAVKAGPLPSIGEQRGALSVEVLVGDRKLLVVN 125 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 G + + + P I GD+N IP Sbjct: 126 THLGLRGRER------IRQMTTLLNAGWLHGSVGESLPAILCGDFNAIPASATYRLAARS 179 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 DA Q + A + +RIDHI ++ Sbjct: 180 LKDA----------QLAGSTAARATFPARYPL-------------------MRIDHIFVT 210 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + + + + + R SDH P++ + Sbjct: 211 DDLV--VKRSAVM-ESRLTRVASDHLPLLAEI 239 >gi|320159473|ref|YP_004172697.1| hypothetical protein ANT_00630 [Anaerolinea thermophila UNI-1] gi|319993326|dbj|BAJ62097.1| hypothetical protein ANT_00630 [Anaerolinea thermophila UNI-1] Length = 264 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 31/273 (11%), Positives = 69/273 (25%), Gaps = 26/273 (9%) Query: 4 VTVATWNVNSIRA------------RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51 +T+ T+N +R R + +++ + D+I LQE + ++ Sbjct: 5 LTLVTFN---LRTAEAQDGEFSWARRRDMVVECLRDLDADLIGLQEVH---DDSQARDVR 58 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 S E G + A + + ++ T + Sbjct: 59 SAFPEYEWIGVRRGGNGAAPLEMNVALVRRGAFEVLEQQF-FWLSRTPEVPGSISWGSAY 117 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC-YNPIIWE 170 + + + + LE + +P + Sbjct: 118 VCTAIFLRLRSCRNGAEAAWFNTHLDYLPQARLEGAKLLRRRIEALPPDCNVLVTGDFNA 177 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230 + D +F + + ID +++S Sbjct: 178 GKRSCVYRTLLGEGASCHRLRDAYRAVHTDGRGEGTFHAFGMLPRPQA----IDWVLVSK 233 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + + A + G PSDH PV + + Sbjct: 234 DLP--VEDAGVACVSVGGVYPSDHYPVWAKVRL 264 >gi|301608024|ref|XP_002933593.1| PREDICTED: huntingtin-interacting protein 1-like [Xenopus (Silurana) tropicalis] Length = 1261 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 22/107 (20%), Positives = 40/107 (37%), Gaps = 10/107 (9%) Query: 155 NIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADS 214 P + +N+ + + L +M D R + Y+F+ + Sbjct: 7 RYNPSEPEKLPKPPQQNNPPTHKNLSLLKKTLSSMQLVDVWREMNPKKKDYTFYSNPHLT 66 Query: 215 WSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +S RIDHI + S++I T SDH+P+ ++L Sbjct: 67 YS-----RIDHIWAQQILLPNIISSKIHTTV-----WSDHSPLSLTL 103 >gi|291613446|ref|YP_003523603.1| endonuclease/exonuclease/phosphatase [Sideroxydans lithotrophicus ES-1] gi|291583558|gb|ADE11216.1| Endonuclease/exonuclease/phosphatase [Sideroxydans lithotrophicus ES-1] Length = 247 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 26/268 (9%), Positives = 61/268 (22%), Gaps = 29/268 (10%) Query: 1 MSVVTVATWNVN-SI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 M+ + +AT+N++ R +H L ++E + DI+ LQE + Sbjct: 1 MTTLKIATYNIHKGFSQFNRRVVLHELRERLRELDADIVFLQEV----------QGEHAG 50 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 + + L+ + + + Q Sbjct: 51 HVQRHADYPAEPQHEFLADEFWAHHAYGMNAVYDEGHHGNAVLSRFPILQAFNKDVSAHR 110 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 + + + L + + P++ D Sbjct: 111 FESRGLLHCEVEIGGQLVHCLCAHFGLFAKGQRAQMRALVEYVLNDIPKDAPLVIAGDFN 170 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 + + + R+D I + Sbjct: 171 DWRNQLSRALAKEIGVQDVFGLQEGKPARSF---PSRIPVF------RLDRIYVRGF--- 218 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + + W + SDH + L+ Sbjct: 219 SVQYCDVHIGG-KWRRLSDHAALSAQLE 245 >gi|229015755|ref|ZP_04172735.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1273] gi|229021962|ref|ZP_04178522.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1272] gi|228739337|gb|EEL89773.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1272] gi|228745543|gb|EEL95565.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1273] Length = 263 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 34/271 (12%), Positives = 65/271 (23%), Gaps = 19/271 (7%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET--KTEDKNFP----FETLQS 52 + + T N +S + +I LA I+E + D+I LQE + +N + Sbjct: 1 MKLLTLNCHSWQEENQIEKIKYLAKVIQEEDYDVIALQEVSQSIQAENVCGNKKKDNFGL 60 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 L + + ++ + F + Sbjct: 61 LLLEELRALNVKAYNIIWDFSHIGYDVYEEGLAIITKHNIVKEDTFFISENKDTTYWKTR 120 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 I + + ++ N + Sbjct: 121 KIVSATIAYNDKNITFYSCHLGWWNDEEESFKDQVDRLMERVNSNELSFLMGDFNNNARL 180 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 E + WD +RID I+ + Sbjct: 181 EGEGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWD------ENKHNLRIDLILCNQS- 233 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +HS+++ SDH V + LDI Sbjct: 234 -KTVHSSKVIFNGTNRNVISDHFGVEMQLDI 263 >gi|91095311|ref|XP_973868.1| PREDICTED: similar to reverse transcriptase homolog [Tribolium castaneum] gi|270017183|gb|EFA13629.1| hypothetical protein TcasGA2_TC005274 [Tribolium castaneum] Length = 971 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 38/275 (13%), Positives = 79/275 (28%), Gaps = 50/275 (18%) Query: 2 SVVTVATWNVNSI---RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 + + +AT N + +A I N + +N +I+ + E K K+FP + ++ Sbjct: 4 NSIKIATANSGGVTRKKAAIENF---LFRDNIEILGITEVKA--KSFP----KFRGFNAI 54 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + G ++ I I + + + + Sbjct: 55 HRRYPAQQGQRE-TRGVAILIKKGFAFSEHQLPNNLQHLDCIAVDTYI----------DS 103 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 T + S + Q I GD+N + + Sbjct: 104 NIITFFTYYNSPRQCLSNELMQYAASLPKAIILGDFNARHTDFGDTLTNRNGHILIDAIS 163 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 ++ + + Y +DHI+++ ++ Sbjct: 164 NLPLYRIPNSSPTHINH-----------WEGYSI----------VDHILVTDSLSNRASD 202 Query: 239 -ARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQD 272 A I G T SDH P++ L + +PR + Sbjct: 203 SANI-----GTTITSDHLPLVFDLSVSKPRTPTPE 232 >gi|83312933|ref|YP_423197.1| hypothetical protein amb3834 [Magnetospirillum magneticum AMB-1] gi|82947774|dbj|BAE52638.1| hypothetical protein [Magnetospirillum magneticum AMB-1] Length = 330 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 45/328 (13%), Positives = 84/328 (25%), Gaps = 64/328 (19%) Query: 1 MSVVTVATWNVNSIRARIHNLAAW----------IKENNPDIICLQE------TKTEDKN 44 M+ + +AT+N+ ++ R + + D++CLQE TK+ + Sbjct: 1 MTPLRIATFNLENLDERPAGGIDFDDRVALMRPQFQRLRADVLCLQEVNTHSVTKSGPRL 60 Query: 45 FPFETL-----QSLNYHIET-------CGQKSYNGVAILSKYQ--PIEIVTHLPGDDLDV 90 F + ++H +N V I ++ L Sbjct: 61 FTALDRLLAGTEYEHWHRVHSLNRGGVHPSDKHNLVIISKMPIRAHRQVWHDLVPPCAYR 120 Query: 91 QARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIF 150 R A L+ G P + + + + + E + Sbjct: 121 PVRANPAPDEPQRVEWDRPILHAELGLPGGRSLHVINVHLRAPRAVWLQGQKERFGRWLS 180 Query: 151 AGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL-------QNMGFTDAIRATHDTHH 203 G + E+ + N G +A Sbjct: 181 VGGWAEGYFLAGVKQAGQALEVRLLVEEIFDARPDALVVVCGDFNAGEHEAGMRIIKGDD 240 Query: 204 LYSFWDYYADS------WSKNKGIR-----------IDHIMLSPEATSLLHSARIDTKPR 246 + + A S +G R +DHI++S A I + Sbjct: 241 EDTGNGHLAMRMLVPLERSLPEGQRYSVIHHGRPVMLDHILVSRPLLGWYLGAEIHNETL 300 Query: 247 GWTKPSD----------HTPVIVSLDIP 264 G S H PV+ +P Sbjct: 301 GDELVSPATIHAPPESYHAPVVAEFSLP 328 >gi|126322197|ref|XP_001375523.1| PREDICTED: similar to TRAF and TNF receptor associated protein, [Monodelphis domestica] Length = 355 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 37/279 (13%), Positives = 78/279 (27%), Gaps = 47/279 (16%) Query: 2 SVVTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56 S ++ TWN++ + +AR ++ ++ PD++ LQE P Y+ Sbjct: 105 STFSLITWNIDGLDINNLQARARSVCEYLALYTPDVVFLQEV------IPP-------YY 151 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 + + + ++ +V + T + L ++ + Sbjct: 152 DYLKKRATSYRIISGNEDGYFTVVMLKKSRVKLMSHEITPFPATQMMRNLLCVHVSVCGN 211 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + + + R + + + Q +I+ D Sbjct: 212 ELCLMSSHLESTRNHSRERMNQLKIVLKKM------------QEIPESVTVIFGGDTNLR 259 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD---SWSKNKGIRIDHIMLSPEAT 233 L + H Y+ WD A+ + + +R D I Sbjct: 260 DHEVSKVGGLPDKILDVWEFLGKPEHCRYT-WDTQANTNLAIEASCKLRFDRIF----FR 314 Query: 234 SLLHSARIDT---KPRGWTK------PSDHTPVIVSLDI 263 I G K PSDH ++ D+ Sbjct: 315 PAAGDCHIIPRNLDLIGLEKLDCGRFPSDHWGLLCGFDV 353 >gi|147843027|emb|CAN83313.1| hypothetical protein VITISV_001463 [Vitis vinifera] Length = 1780 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 8/38 (21%), Positives = 21/38 (55%), Gaps = 2/38 (5%) Query: 4 VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETK 39 + + +WN + ++ + +++ PD++ +QETK Sbjct: 754 MKIISWNTRGLGSKKKRRVVKXFLRSEKPDVVMIQETK 791 >gi|71834576|ref|NP_001025390.1| sphingomyelin phosphodiesterase 2, neutral [Danio rerio] gi|68563437|dbj|BAE06149.1| Mg2+-dependent neutral sphingomyelinase [Danio rerio] Length = 420 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 42/284 (14%), Positives = 73/284 (25%), Gaps = 35/284 (12%) Query: 4 VTVATWNVNSIR-------ARIHNLAAWIKENNPDIICLQETKTEDKNF--PFETLQSLN 54 + V + N IR R + + DI LQE +E + S Sbjct: 9 LRVFSLNCWGIRFLSKLCAQRYEMIGELLGREQHDIALLQEVWSERDFLFLKRKLSCSHP 68 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN---- 110 Y +G+A+ SK++ + + + + F L I Sbjct: 69 YTHYFKSGVIGSGLAVFSKHRIQDALLYQYSLNGYPYMLSHGDWFGGKAAGLVIVEVFGL 128 Query: 111 -------LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 + +I +F + +I GD N+ P Sbjct: 129 KAHVYVTHLHAEYSRAQDGYLPHRIVQSWELQQFVRHTSHGADLVILGGDLNMHPSDLGN 188 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223 E + T + KGIRI Sbjct: 189 RLLRSHTGLRGCYTETDKFDGCEDGHTLIANNHFTKKQDLI-----------PFEKGIRI 237 Query: 224 DHIML--SPEATSLLHSARIDTKPRGWTKP--SDHTPVIVSLDI 263 D+I++ S + S SDH ++ L++ Sbjct: 238 DYILMKGSQRVSVKCESLSTTKGSVSDKPFPYSDHEALMADLNL 281 >gi|298204349|gb|ADI61823.1| endonuclease-reverse transcriptase [Bombyx mori] Length = 997 Score = 54.4 bits (129), Expect = 2e-05, Method: Composition-based stats. Identities = 37/256 (14%), Positives = 75/256 (29%), Gaps = 18/256 (7%) Query: 6 VATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + TWNV ++ A L + ++ D+ LQE + + Y+ Sbjct: 29 LCTWNVRTLNRPAAFQVLCQQLTQHRADVTALQEIRWV-GQGVVKRADYTAYYSCHPKHH 87 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 + ++ K I+ P ++ R + Sbjct: 88 LFGTGFVVGKRLQPLIIDFQPINERMCSIRIKGKFQNYTIINVHAPTEESAPEEKEK--W 145 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y D S + + + + + + P ++ +++ S Sbjct: 146 YYDVESVYSKAPKGDVKVIIGDLNAKIGREEVYRPTIGLHSLHETSNDNGTRLIDLASSL 205 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + H H +++ AD ++N+ IDHI++ S L Sbjct: 206 NM-----AIGSTCFPHKNIHKVTWFS--ADGVTRNQ---IDHILIDRRHYSNLLDV---R 252 Query: 244 KPRGWTKPSDHTPVIV 259 RG SDH V+ Sbjct: 253 SHRGANIDSDHYLVVC 268 >gi|291515920|emb|CBK65130.1| Metal-dependent hydrolase [Alistipes shahii WAL 8301] Length = 293 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 45/290 (15%), Positives = 84/290 (28%), Gaps = 57/290 (19%) Query: 2 SVVTVATWNVNSIRARIHNLA-------AWIKENNPDIICLQETKT------EDKNFPFE 48 ++ + T+N+ RA A I+ +PD + L E +D + + Sbjct: 38 RIIRIMTYNIYGARATSPANAADLDALAEVIRRQDPDFVTLNEVDVFTNRTGKDVHQARD 97 Query: 49 TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108 L +G + L A ++ + I Sbjct: 98 LAAKLGMEWHFSKAIDRDGGEYGDAVLSKHPIIETRSYRLPCAASQPGEDRSLCVIRVEI 157 Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168 L + D ++ + EL+ LI AGD N IP + Sbjct: 158 DGKDLYVASTHLDHLSGDASRLVQANEIRRIRDTELDGDLILAGDLNAIPSSNVIATMTA 217 Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 + + Y+F +N +ID+I+ Sbjct: 218 FLTNVGTI--------------------------DQYTFPS-------ENPTRKIDYILY 244 Query: 229 SPEATSLLHSARI----DTKPRGWTKPSDHTPVIVSL------DIPEPRK 268 +P + + + D + G SDH PV+ + D+PE ++ Sbjct: 245 APIGHFGVQNCTVVSRSDQQVDGVD-ASDHRPVVADIRFQTEEDLPENQE 293 >gi|84393951|ref|ZP_00992692.1| hypothetical protein V12B01_14350 [Vibrio splendidus 12B01] gi|84375450|gb|EAP92356.1| hypothetical protein V12B01_14350 [Vibrio splendidus 12B01] Length = 292 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 44/275 (16%), Positives = 74/275 (26%), Gaps = 22/275 (8%) Query: 4 VTVATWN---------VN---SIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFET 49 +T+++WN VN S R A L + + + D++ QE D + Sbjct: 23 LTISSWNIEWLSTNEAVNKFSSKRNQADFDKLEQYFQSLDADVVAFQEV---DDVNDIQR 79 Query: 50 LQSLNYHI-ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108 + Y I + N + G L A F + Sbjct: 80 ITGNQYKILMSDRALPKNSNRQFKEVNQYTGFAVRKGITLTDYADFPLERSANSKLRFAS 139 Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168 + NPI K + ++ + + Y + Sbjct: 140 YMVVETDSNPIHMLSVHLKAGCSGAYKSNRDCSRLKDQAKQLNKWIQQRERKGEDYAILG 199 Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 N QN R T + S + + IDHI++ Sbjct: 200 DFNHNLSYSRDWMWKDMTQNTDAQLVTRKTRADCKVRS---NRNNHRTHQFRSVIDHIVV 256 Query: 229 SPEA-TSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 S S +T+ K SDH PV ++ Sbjct: 257 SKSLDASPAKQKVFETQDVLDYKLSDHCPVSTTIK 291 >gi|171318391|ref|ZP_02907548.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria MEX-5] gi|171096399|gb|EDT41299.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria MEX-5] Length = 269 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 28/263 (10%), Positives = 64/263 (24%), Gaps = 49/263 (18%) Query: 4 VTVATWNVNS------IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57 + +AT+N+ RA +A I E + D+I LQE L Sbjct: 29 LRIATYNIRGGYGAWHTRAA-DRIAQVIHELDADVIALQEV-------------PLG--- 71 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 + + + G L + Sbjct: 72 ------------GTHAHDVLAHLRDATGMHAVAGPTIDTPERRYGNAVLSRCPVRAARTL 119 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 ++ + + + + A + L + Sbjct: 120 DLSFHQREPRGALDADIDCSAGTIRVVATHLGLSARERSAQVQRLLAAFDTGAMPVILMG 179 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLY-SFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 ++ + F + + + + + + ++ +D I + P L Sbjct: 180 DINEWFVRGRALRALVTRFRRAPAPRTFPTLYPMFS----------LDRIWIHPG--EWL 227 Query: 237 HSARIDTKPRGWTKPSDHTPVIV 259 + R + SDH P++ Sbjct: 228 VDVNVHRSVRAR-RASDHYPLVA 249 >gi|7512026|pir||T13173 RNA-directed DNA polymerase (EC 2.7.7.49) - fruit fly (Drosophila melanogaster) transposon TART-B1 gi|603664|gb|AAC46494.1| putative reverse transcriptase [Drosophila melanogaster] Length = 1084 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 40/265 (15%), Positives = 81/265 (30%), Gaps = 36/265 (13%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 ++ +A WN I +I L +I + II + ET+ ++ + E Y + Sbjct: 9 ILKIAFWNAGGINNKIDELKLFILNIDAHIIIVTETRLDNNSTKLELPGYFTYLAQNPVS 68 Query: 63 KSYNGVAILSKYQPIEIV-THLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 GVA + + + + + + ++ + I ++Y P Sbjct: 69 SKRGGVATIVNSSIRHMALKPIEKECIQSAPIVLLPENNRRSEMIVIASVYCPPSLRWLP 128 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + L FA + L + I GD+N + C A + Sbjct: 129 HHF-------TDVLNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQ-RGTALYEAVQAD 180 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP--EATSLLHSA 239 S ++ G D + + ID + + S Sbjct: 181 STAEIIATGCATHFPH-----------DTRKNPSA------IDFSICKGLGRFEKRISS- 222 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIP 264 G SDH P+++ +++ Sbjct: 223 -------GADLSSDHLPILLEINLD 240 >gi|281425257|ref|ZP_06256170.1| hypothetical protein HMPREF0971_02229 [Prevotella oris F0302] gi|281400550|gb|EFB31381.1| putative endonuclease/exonuclease/phosphatase family protein [Prevotella oris F0302] Length = 299 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 43/272 (15%), Positives = 79/272 (29%), Gaps = 35/272 (12%) Query: 8 TWNV-----------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY- 55 ++N+ NS + R +L +I P I QE + + + L + Y Sbjct: 42 SYNIRYNVSDDIAEGNSWKQRCPHLCDFINFEQPVIFGAQEVLADQLHDLLQGLDNYGYI 101 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + K A + + + + L + + + Sbjct: 102 GVGREDGKEAGEYAAIFYKKDLLKLLDSGYFWLSETPEKPSTGWDAACIRICTWGKFQDK 161 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + T ++ + + R S RL ++ G I D Sbjct: 162 ASKKTFYFFNTHMDHVGAVARRESARLIIQRMKELTGG-----------KYTILTGDFNA 210 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLY-SFWDYYADSWSKNKGI-RIDHIMLSPEAT 233 ++ D H ++ DY G+ RIDHI ++ + Sbjct: 211 NQTDESYKMFSESGFLRDCYVNAHQRMAPVGTWNDYM----QDYPGVARIDHIFVTKDFD 266 Query: 234 SLLHSARIDTKPRGWTKP----SDHTPVIVSL 261 ++ I T K SDH PV+V L Sbjct: 267 --INHYGIFTNSYWLGKTRRNISDHYPVMVKL 296 >gi|303282397|ref|XP_003060490.1| predicted protein [Micromonas pusilla CCMP1545] gi|226457961|gb|EEH55259.1| predicted protein [Micromonas pusilla CCMP1545] Length = 101 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 6/39 (15%) Query: 6 VATWNVNSIRARIHN------LAAWIKENNPDIICLQET 38 TWN N R+ N +++ +PD+ICLQET Sbjct: 31 FITWNANGFLGRMKNEVDKACFLKYVERLDPDVICLQET 69 >gi|170763963|ref|ZP_02636372.2| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens B str. ATCC 3626] gi|170711168|gb|EDT23350.1| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens B str. ATCC 3626] Length = 262 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 47/276 (17%), Positives = 80/276 (28%), Gaps = 28/276 (10%) Query: 1 MSVVTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51 M + V T+N+ N R + IK++ PDII QE + + L Sbjct: 1 MRNLKVMTFNLKYDFKAQDNNEWSQRCLRITKLIKDHLPDIIGTQEGLIHMLDDMDDLLD 60 Query: 52 SLNY---HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108 ++ E G+ +N + L + + ++ ++ Sbjct: 61 EYSWVGEDREGNGKDEFNAIFFLKNKFEVLEWNQFWLSKTPNIKGSKDFNSSLPRICTKL 120 Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL-EEPLIFAGDYNIIPQPHDCYNPI 167 G I L+ ++ II +CY Sbjct: 121 KLKDKISGLKIDIYNTHLDHESELAREEGIKIILKEVKKNYSIEKTPYIIMGDFNCYLED 180 Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227 N F + + + H Y +G ID+I+ Sbjct: 181 NLFNIIREEETNNTCFNVCYDNIKNNILGTFHYFKGGY-------------EGKIIDYIL 227 Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 S E + S ID + PSDH PVI L++ Sbjct: 228 YSKEYE--IKSLNIDDRKINGGYPSDHYPVICELEL 261 >gi|298204345|gb|ADI61821.1| endonuclease-reverse transcriptase [Bombyx mori] Length = 980 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 26/270 (9%), Positives = 73/270 (27%), Gaps = 17/270 (6%) Query: 5 TVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 ++TWNVN + + ++ +N I+ + ET + S + G Sbjct: 63 RISTWNVNGLLQAGKLSIVEKEMENHNLSILGICETHMRNNG---HFKTSTGNTVYFSGN 119 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 ++ + + P L + + ++ + Sbjct: 120 ENSSRNGVAIVLPPYLNQYVLGYHPISDRILTLKLNTKPFITNVIQIYAPTAQAKYEDID 179 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + + + G+ + + Sbjct: 180 DFYHSLDATLGSIPNREITFIPGDWNAKVGETTA---DGHIRRTVGNFGLGKRNDRGERF 236 Query: 183 FQKLQNMG-FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 + H LY++ +N+ I++I+++ S + + + Sbjct: 237 LEFCVEKDLTILNTCFQHHARRLYTWKS--PGDRFRNQ---INYILINSRWRSTVSNVKT 291 Query: 242 DTKPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271 G SDH ++ + + +K++ Sbjct: 292 YP---GADCGSDHVLLVANFRLRLKAQKRK 318 >gi|147783925|emb|CAN74690.1| hypothetical protein VITISV_001350 [Vitis vinifera] Length = 748 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 9/38 (23%), Positives = 22/38 (57%), Gaps = 2/38 (5%) Query: 4 VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETK 39 + + +WN + +R + +++ NP+++ +QETK Sbjct: 376 MKIISWNTRGLGSRNKRRVVKDFLRSENPNVVMIQETK 413 >gi|147782259|emb|CAN76301.1| hypothetical protein VITISV_004811 [Vitis vinifera] Length = 1044 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 29/244 (11%), Positives = 68/244 (27%), Gaps = 30/244 (12%) Query: 18 IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPI 77 + + I+ D+ CLQETK + E ++SL Sbjct: 755 RKIIKSVIRSQKVDLFCLQETKVQV--MSDEMVRSLG----------TGRYLDWKVLNAK 802 Query: 78 EIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF 137 + + I + G+ + + Sbjct: 803 GTAGGVIICWDKRSLEILGVEEG----QFSISCRFRNEGDGAIW-----VFTGVYGPFSR 853 Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA 197 + EE G + +N ++ +D T + + ++ + + Sbjct: 854 EDREGLWEELGAIRGLWEEPWCLGGDFNITLYIDDRNRTXRITSAMRRFAQIIDELGLVD 913 Query: 198 THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP-SDHTP 256 +++ + + R+D + +P +R+ R +P SDH P Sbjct: 914 IPLQGGSFTW----SGGLNNQTRARLDRFLATPCWLDQF--SRVLN--RRLPRPTSDHYP 965 Query: 257 VIVS 260 +++ Sbjct: 966 ILLE 969 >gi|300118993|ref|ZP_07056704.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus SJ1] gi|298723609|gb|EFI64340.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus SJ1] Length = 263 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 34/271 (12%), Positives = 63/271 (23%), Gaps = 19/271 (7%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET------KTEDKNFPFETLQS 52 + + T N +S + +I LA I+E D+I LQE K N + Sbjct: 1 MKLLTLNCHSWQEENQIEKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGL 60 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 L + + ++ + F + Sbjct: 61 LLLEELKALHVKDYNITWDFSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTTYWKTR 120 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 IT + + ++ + + Sbjct: 121 KIVSATITYNGKNITFYSCHLGWWNDEEESFKDQVNRLMERVDSNELSFLMGDFNNNARL 180 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 E + WD +RID I+ + Sbjct: 181 QGEGYEYMMQKGLYDTYELAIKKDEGTTVQGEIAGWD------ENKHNLRIDLILCNRS- 233 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + S+++ SDH V V +DI Sbjct: 234 -EKIRSSKVVFNGTNRKVISDHFGVEVQVDI 263 >gi|261199552|ref|XP_002626177.1| sphingomyelinase [Ajellomyces dermatitidis SLH14081] gi|239594385|gb|EEQ76966.1| sphingomyelinase [Ajellomyces dermatitidis SLH14081] gi|239615550|gb|EEQ92537.1| sphingomyelinase [Ajellomyces dermatitidis ER-3] Length = 525 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 53/341 (15%), Positives = 95/341 (27%), Gaps = 65/341 (19%) Query: 6 VATWNVNSIRA----RIHNLAAW---IKENN--PDIICLQETKTEDK--NFPFETLQSLN 54 + T N ++ R L I ++ P I+ LQE T++ N ET + L Sbjct: 15 ILTLNCWGLKFLSTYRRERLLEIGKRIARSDDPPHIVGLQECWTQEDYSNIRRETREILP 74 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ---TLRIGNL 111 Y G+AILSK+ E + + A F F +RIG Sbjct: 75 YGKFYFSGIFGGGLAILSKWPIEESTMYEYPLNGRPTAFFRGDWFVGKGVACARIRIGPS 134 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIF------------AGDYNIIPQ 159 + + + E + GD+N++PQ Sbjct: 135 PTDTAEVFCTHLHAPYEKEPRDSYLCHRTAQAWEIGKLMRAAAERGHLVIGLGDFNMLPQ 194 Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY-------------- 205 + + + + R + Sbjct: 195 SFAHRLITSHAPVKDVWIHLHPDSSIGAAVDAVEMARKKPVPSADFNIIENGATCDGIFN 254 Query: 206 SF-WDYYADSWSKNKG-------------IRIDHIML--------SPEATSLLHSARI-- 241 ++ W+ K +G R+D+I + S + SAR+ Sbjct: 255 TWRWNKSQQKRLKREGHIEVDGQLPDPLGKRLDYIFIGDGAYSNFSSPRKWTIVSARVSM 314 Query: 242 -DTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 + P SDH V ++ + + + + PI Sbjct: 315 MERHPTLHCSLSDHFGVEATITLDVAKDDDSEEDLSSFLPI 355 >gi|306843285|ref|ZP_07475893.1| Endonuclease/exonuclease/phosphatase family protein [Brucella sp. BO2] gi|306286516|gb|EFM58102.1| Endonuclease/exonuclease/phosphatase family protein [Brucella sp. BO2] Length = 369 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 42/309 (13%), Positives = 78/309 (25%), Gaps = 75/309 (24%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQ--------SLNYHIETCGQKSYNGVAILSKYQP 76 I E DI+CLQE D + Y + + + ++ Sbjct: 65 IAETRADILCLQEV---DNLAALNAFEYGYLFKMIGYGYRHKYLIDGNDSRGIDVAVMMR 121 Query: 77 IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI----------------- 119 P + +V + L + L + + I Sbjct: 122 DTTRDGQPIEVDEVTSHAHLTYSDFGLYQLELAELGIEPHDRIFKRDCLNVDLRIGGEPL 181 Query: 120 -----------------------TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI 156 + + + + E + GD+N Sbjct: 182 SLFVAHLKSMSGARNGLDGRASSHPVRLAEARAIRRIIEEKFGIDRVAERRWLICGDFND 241 Query: 157 IPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS 216 + + +E + L GF + ++ + Sbjct: 242 YRERILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDRWTLYHTRGPLER 301 Query: 217 KNKGIRIDHIMLSPEATSLLHSA-------------------RIDTKPR-GWTKP--SDH 254 ++D+IM SP + A +D PR GW +P SDH Sbjct: 302 --HLCQLDYIMASPAFAAKNEHAVPDIIRRGQPWRTIFPPEQNVDRYPRTGWDRPKASDH 359 Query: 255 TPVIVSLDI 263 PV V+L++ Sbjct: 360 CPVSVTLNM 368 >gi|23307585|dbj|BAC16719.1| unknown protein [Oryza sativa Japonica Group] Length = 443 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 40/268 (14%), Positives = 86/268 (32%), Gaps = 18/268 (6%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDK---NFPFETLQSLNY-HIETCGQKSYNGVAILS 72 R ++ ++E DII LQ + E++ + E + L ++ G A+LS Sbjct: 172 RRRSVEEVLREVGADIIGLQNVRAEEERGMSPLSELAEGLGMRYVFAESWAPEYGNAVLS 231 Query: 73 KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIK 132 ++ + D D + +L H + K + I Sbjct: 232 RWPIKRWKSQRVADQSDFNVLRATIEVPRAG-EVNFHCTHLDHLDESWRMKQMNAILRSS 290 Query: 133 RFLRFASQRLELEEPLIFAG-DYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191 + L + ++ + I + ++ + + L+ +Q G Sbjct: 291 DGPHILTGGLNALDGTDYSDERWADIVKYYEEIGKPTPKAEVMKYLKGKQYVDAKDFAGE 350 Query: 192 TDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP 251 +A+ + G R+D+I+ SP + Sbjct: 351 CEAVVVVAKGQVQGTC----------KYGTRVDYILASPNSPYKFVPGS--YTVISSKGT 398 Query: 252 SDHTPVIVSLDIPEPRKKQQDSTSQNMK 279 SDH V V + I + ++ ++S +Q + Sbjct: 399 SDHHIVKVDVTIQDKKETDEESGNQRQR 426 >gi|229089490|ref|ZP_04220760.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-42] gi|228693876|gb|EEL47569.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-42] Length = 263 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 33/271 (12%), Positives = 62/271 (22%), Gaps = 19/271 (7%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET------KTEDKNFPFETLQS 52 + + T N +S + +I LA I+E D+I LQE K N + Sbjct: 1 MKLLTLNCHSWQEENQIEKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGL 60 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 L + + ++ + F + Sbjct: 61 LLLEELKALHVKDYNITWDFSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTTYWKTR 120 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 I + + ++ + + Sbjct: 121 KIVSATIAYNGKNITFYSCHLGWWNDEEESFKDQVNRLMERVDSNELSFLMGDFNNNARL 180 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 E + WD +RID I+ + Sbjct: 181 QGEGYEYMMQEGLYDTYELAIEKDEGTTVQGEIAGWD------ENKHNLRIDLILCNRS- 233 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + S+++ SDH V V +DI Sbjct: 234 -EKIRSSKVVFNGTNRKVISDHFGVEVQVDI 263 >gi|147865204|emb|CAN81959.1| hypothetical protein VITISV_037466 [Vitis vinifera] Length = 1786 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 35/261 (13%), Positives = 75/261 (28%), Gaps = 51/261 (19%) Query: 4 VTVATWNVNSIRA----RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 V + +WNV RA + + +I+ D+IC+QETK + Sbjct: 709 VKILSWNVR--RANDSSKRKVINTFIRNQRVDLICIQETKMQ------------------ 748 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 ++ S + G + + + + + + + Sbjct: 749 -LMTDSIARSLGSGRFLDWKAVNAEGASGGIFICWDRRFRNVKNGVVWVFTGVYGPFSKV 807 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + F + R E+P GD+NI P + + E+ Sbjct: 808 ERDAL---------WEEFGAIRGLWEDPWCLRGDFNITLFPRERSXQRRISSAMRKFAEI 858 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHS 238 + +++ + N+ R+D +++P Sbjct: 859 VNDLGLVD--------LPLQGGGGEFTW-----NGGQNNQTWARLDRFLVTPSWIDQFSG 905 Query: 239 ARIDTKPRGWTKPSDHTPVIV 259 PR S+H P+++ Sbjct: 906 INQCRLPR---PVSNHFPIML 923 >gi|327354699|gb|EGE83556.1| sphingomyelinase [Ajellomyces dermatitidis ATCC 18188] Length = 525 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 53/341 (15%), Positives = 95/341 (27%), Gaps = 65/341 (19%) Query: 6 VATWNVNSIRA----RIHNLAAW---IKENN--PDIICLQETKTEDK--NFPFETLQSLN 54 + T N ++ R L I ++ P I+ LQE T++ N ET + L Sbjct: 15 ILTLNCWGLKFLSTYRRERLLEIGKRIARSDDPPHIVGLQECWTQEDYSNIRRETREILP 74 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ---TLRIGNL 111 Y G+AILSK+ E + + A F F +RIG Sbjct: 75 YGKFYFSGIFGGGLAILSKWPIEESTMYEYPLNGRPTAFFRGDWFVGKGVACARIRIGPS 134 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIF------------AGDYNIIPQ 159 + + + E + GD+N++PQ Sbjct: 135 PTDTAEVFCTHLHAPYEKEPRDSYLCHRTAQAWEIGKLMRAAAERGHLVIGLGDFNMLPQ 194 Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY-------------- 205 + + + + R + Sbjct: 195 SFAHRLITSHAPVKDVWIHLHPDSSIGAAVDAVEMARKKPVPSADFNIIENGATCDGIFN 254 Query: 206 SF-WDYYADSWSKNKG-------------IRIDHIML--------SPEATSLLHSARI-- 241 ++ W+ K +G R+D+I + S + SAR+ Sbjct: 255 TWRWNKSQQKRLKREGHIEVDGQLPDPLGKRLDYIFIGDGAYSNFSSPRKWTIVSARVSM 314 Query: 242 -DTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 + P SDH V ++ + + + + PI Sbjct: 315 MERHPTLHCSLSDHFGVEATITLDVAKDDDSEEDLSSFLPI 355 >gi|322704280|gb|EFY95877.1| exonuclease III [Metarhizium anisopliae ARSEF 23] Length = 539 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 34/293 (11%), Positives = 75/293 (25%), Gaps = 41/293 (13%) Query: 2 SVVTVATWNVN-SIRARI----HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56 + V T N+ R + + +++ + D++ LQE+ +D ++L ++ Sbjct: 258 RSIRVLTLNLWLGGRNVVDYHTKQV-SFLASQDVDVVALQESYFQDG---RRLAKALGWN 313 Query: 57 IETCGQKSYNGVAILSKYQPIEIVT-------------HLPGDDLDVQARFIEATFTINT 103 + V+ILS+Y + L A + Sbjct: 314 V-----WQAKDVSILSRYPIGRVYREIEAGGTVRIDLDGDAKQLLVWNVHLNNAPYGPYD 368 Query: 104 QTL--RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161 N + +I + + EL ++ + + Sbjct: 369 LCFTNYSTNYIQRREEWARRVQQVYEIVHRLKEYKERKPEFELLPQILAGDFASPSHLDY 428 Query: 162 DCYNPIIWENDACFTLEVRQSF---QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN 218 + F D R ++ + + Sbjct: 429 TMKTRDLHCKGRDPFPWPVSRRVVLDAKWKDSFRDVFRDPWKVPGN-TWSPVRRLNGDRP 487 Query: 219 KGI-RIDHIMLSPEATSLLHSARIDTKPR------GWTKPSDHTPVIVSLDIP 264 + + RID I + + P+ SDH V+ +P Sbjct: 488 EPMDRIDFIY-HKMLKTTHSDVVVVGDPKPEPYHADNEWTSDHAAVVSEFQLP 539 >gi|196034583|ref|ZP_03101991.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus W] gi|228944177|ref|ZP_04106556.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|195992626|gb|EDX56586.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus W] gi|228815566|gb|EEM61808.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 263 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 33/271 (12%), Positives = 62/271 (22%), Gaps = 19/271 (7%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET------KTEDKNFPFETLQS 52 + + T N +S + +I LA I+E D+I LQE K N + Sbjct: 1 MKLLTLNCHSWQEENQIEKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGL 60 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 L + + ++ + F + Sbjct: 61 LLLEELKALHVKDYNITWDFSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTTYWKTR 120 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 I + + ++ + + Sbjct: 121 KIVSATIAYNGKNITFYSCHLGWWNDEEESFKDQVNRLMERVDSNELSFLMGDFNNNARL 180 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 E + WD +RID I+ + Sbjct: 181 QGEGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWD------ENKHNLRIDLILCNRS- 233 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + S+++ SDH V V +DI Sbjct: 234 -EKIRSSKVVFNGTNRKVISDHFGVEVQVDI 263 >gi|324324468|gb|ADY19728.1| endonuclease/exonuclease/phosphatase family protein [Bacillus thuringiensis serovar finitimus YBT-020] Length = 263 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 33/271 (12%), Positives = 62/271 (22%), Gaps = 19/271 (7%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET------KTEDKNFPFETLQS 52 + + T N +S + +I LA I+E D+I LQE K N + Sbjct: 1 MKLLTLNCHSWQEENQIEKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGL 60 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 L + + ++ + F + Sbjct: 61 LLLEELKALHVKDYNITWDFSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTTYWKTR 120 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 I + + ++ + + Sbjct: 121 KIVSATIAYNGKNITFYSCHLGWWNDEEESFKDQVNRLMERVDSNELSFLMGDFNNNARL 180 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 E + WD +RID I+ + Sbjct: 181 QGEGYEYMMQEGLYDTYELAIEKDEGTTVQGEIAGWD------ENKHNLRIDLILCNRS- 233 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + S+++ SDH V V +DI Sbjct: 234 -EKVRSSKVIFNGTNRNVISDHFGVEVQVDI 263 >gi|190894773|ref|YP_001985066.1| putative metal-dependent hydrolase [Rhizobium etli CIAT 652] gi|190700434|gb|ACE94516.1| putative metal-dependent hydrolase protein [Rhizobium etli CIAT 652] Length = 242 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 36/272 (13%), Positives = 74/272 (27%), Gaps = 52/272 (19%) Query: 4 VTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQETKT---------EDKNFPFET 49 + + T+NV+S + +A+ I E DI+ LQE + Sbjct: 6 IKLLTYNVHSCIGNDRKLDPGRIASVIAEAGADIVALQEVDVLRRRTGGIDQAHLIASLL 65 Query: 50 LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 ++H + G AI++ + + + + + L + Sbjct: 66 KMQAHFHPALSVAEEQYGDAIITALPTSAVKAGPLPSIGEQRGALSVEVLVGDRKLLVVN 125 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 G + + +E P + GD+N +P Sbjct: 126 THLGLRGRER------IRQMTTLLNSGWLRGAMEEPLPCVLCGDFNALPSSATYRLVARS 179 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 DA + + + +R+DHI ++ Sbjct: 180 LKDAQLGGKASP----------RATFPSRYPL-------------------MRLDHIFVT 210 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + + A + R SDH P+ + Sbjct: 211 DDLV--VKRAAVLQN-RLTNVASDHLPLFAEI 239 >gi|147768838|emb|CAN75888.1| hypothetical protein VITISV_023640 [Vitis vinifera] Length = 3804 Score = 54.0 bits (128), Expect = 2e-05, Method: Composition-based stats. Identities = 33/235 (14%), Positives = 64/235 (27%), Gaps = 32/235 (13%) Query: 28 NNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDD 87 D+ C+QETK + E ++SL K+ N + L Sbjct: 654 EKVDLFCIQETKMQV--MSEEVVRSLG-PGRYLDWKALNAMGTAGGVLICWDKRSLELLG 710 Query: 88 LDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEP 147 ++ I F + +++ G ++ D + W + Sbjct: 711 VEEGQFSISCRFRNVGDGV----IWVFTGVYGPCSRKDRECLWEEFGAIRGLWEDPWCLG 766 Query: 148 LIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF 207 F + + A E+ L +++ Sbjct: 767 GDFNSTLYQAERSRNGRITSAMRRFAQVIDELGLIDIPL--------------QGGSFTW 812 Query: 208 WDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKP-SDHTPVIVS 260 N+ R+D ++SP A R +P SDH P+++ Sbjct: 813 -----SGGLNNQSWARLDRFLVSPNWIDQYSRA----NQRRLPRPISDHFPILLE 858 >gi|218895489|ref|YP_002443900.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus G9842] gi|218543762|gb|ACK96156.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus G9842] Length = 263 Score = 54.0 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 35/271 (12%), Positives = 63/271 (23%), Gaps = 19/271 (7%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET--KTEDKNFP----FETLQS 52 + + T N +S + +I LA I+E D+I LQE + +N + Sbjct: 1 MKLLTLNCHSWQEENQIEKIQYLAKVIQEEEYDVIALQEVSQSIQAENVCGNKKKDNFGL 60 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 L + + ++ + F + Sbjct: 61 LLLEELKALHVKDYNITWDFSHIGYDVYEEGLAIITKHNIIKEDTFFISENEDTTYWKTR 120 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 I D + + + + Sbjct: 121 KIVSTTIAYNGKDITFYSCHLGWWNDEEESFKGQFDRLMERVDSNKLAFLMGDFNNNARL 180 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 E + WD +RID I+ + Sbjct: 181 EGEGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWD------ENKHNLRIDLILCNQS- 233 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +HS+++ SDH V V LDI Sbjct: 234 -KKVHSSKVIFNGTNRNVISDHFGVEVQLDI 263 >gi|290995827|ref|XP_002680484.1| phosphatase [Naegleria gruberi] gi|284094105|gb|EFC47740.1| phosphatase [Naegleria gruberi] Length = 310 Score = 54.0 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 47/298 (15%), Positives = 90/298 (30%), Gaps = 41/298 (13%) Query: 2 SVVTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQETK--------------TED 42 ++++ ++NV+ R+ + L ++ +NN DI+CL E + Sbjct: 16 NLLSCCSFNVHHFSTAYGRSNLTELYKYLHKNNFDIVCLNEVYEDSEYSHPLRDLVYALN 75 Query: 43 KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN 102 + P E + Y + +Y ILSKY + G + Sbjct: 76 SSLPEEVEVARPYQYRSGP-TNYESNIILSKYPILFQEKKDVGRGERSVLGIKIDHPLVR 134 Query: 103 TQTLRIGNLYLPHGNPIT-------STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYN 155 + + + + + D+ + L + + DY Sbjct: 135 NVFVTHLDHVSENKRVLQLKRVLSFMKHFIDRKLVDYPNDENKNFILLGDFNSMRMDDYT 194 Query: 156 IIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL--YSFWDYYAD 213 + I + +A T F + A + W Sbjct: 195 DKFWDYLIKQRIQYGWEAPDTQVTSLLFNEPTTPESHSTEEADEPKLKMPLVDCWKVLNP 254 Query: 214 S--WSKNKGI-------RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + KG RID+++ + E L + ID+ G SDH PV+V + Sbjct: 255 DIIFEGEKGTGSSRLDTRIDYVISNTELQPYLKQSWIDSDASGI---SDHLPVVVLFE 309 >gi|163788842|ref|ZP_02183287.1| endonuclease/exonuclease/phosphatase family protein [Flavobacteriales bacterium ALC-1] gi|159876079|gb|EDP70138.1| endonuclease/exonuclease/phosphatase family protein [Flavobacteriales bacterium ALC-1] Length = 575 Score = 54.0 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 41/288 (14%), Positives = 81/288 (28%), Gaps = 36/288 (12%) Query: 2 SVVTVATWNV--NSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL---- 53 S + + T+N N R+ N I+ PDII L E + + L + Sbjct: 214 SDIRLMTYNTLFNGFNDVDRVDNFENIIRSIAPDIIGLNECWNTSETYVKSLLDTWLPTG 273 Query: 54 ---NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 +++E G LS+++ I+ +L + + Sbjct: 274 TQNGWYVE-----KIGGQITLSRWEIIQEWQNLSRQFPVLIDLPSSYPTDLLFTN--AHL 326 Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170 + + + L P I++GD N++ Sbjct: 327 NCCGADQQRQDQADEYAAFILDAKSPGGNITLPENTPFIYSGDLNLVGYAQQLTTLKT-G 385 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230 + + + + D Y++ + + K +D I+ S Sbjct: 386 DIQDTATYGVGAPLDWDDTALKEENSIQTDLRMGYTWRSD-GEGFPPGK---LDFIIFSD 441 Query: 231 EATSLLHSARIDTKPRGWTK-------------PSDHTPVIVSLDIPE 265 + S + T+ + SDH PV+ I E Sbjct: 442 HTLTAEKSFVLQTEVMPTDRLNLYNLNLLDTSSASDHFPVVADFSINE 489 >gi|118476126|ref|YP_893277.1| endonuclease/exonuclease/phosphatase family protein [Bacillus thuringiensis str. Al Hakam] gi|118415351|gb|ABK83770.1| endonuclease/exonuclease/phosphatase family protein [Bacillus thuringiensis str. Al Hakam] Length = 267 Score = 54.0 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 34/273 (12%), Positives = 64/273 (23%), Gaps = 19/273 (6%) Query: 2 SVVTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET------KTEDKNFPFETL 50 + + + T N +S + +I LA I+E D+I LQE K N + Sbjct: 3 NNMKLLTLNCHSWQEENQIEKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNF 62 Query: 51 QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 L + + ++ +A F + Sbjct: 63 GLLLLEELKALHVKDYNITWDFSHIGYDVYEEGLAIITKHNVVKEDAFFISENKDTTYWK 122 Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170 I + + ++ + + Sbjct: 123 TRKIVSATIAYNGKNITFYSCHLGWWNDEEESFKDQVNRLMERVDSNELSFLMGDFNNNA 182 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230 E + WD +RID I+ + Sbjct: 183 RLQGEGYEYMMQEGLYDTYELAIEKDEGTTVQGEIAGWD------ENKHNLRIDLILCNR 236 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + S+++ SDH V V +DI Sbjct: 237 S--EKIRSSKVVFNGTNRKVISDHFGVEVQVDI 267 >gi|57235078|ref|YP_180859.1| endonuclease/exonuclease/phosphatase family protein [Dehalococcoides ethenogenes 195] gi|57225526|gb|AAW40583.1| endonuclease/exonuclease/phosphatase family protein [Dehalococcoides ethenogenes 195] Length = 591 Score = 54.0 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 31/267 (11%), Positives = 67/267 (25%), Gaps = 43/267 (16%) Query: 3 VVTVATWNV-NSIRAR----IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57 + + T+N+ N + + LA I+++ D++ LQE Sbjct: 363 TLRIMTYNLHNGFNTQGKLDLEALARVIEDSGADVVALQEI------------------S 404 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 + + + ++T + + + G Sbjct: 405 RGWVISGRVDMLEWLAQRLNMHFAFGATAGEYWGNAILSKYPILDTHNVSLES----EGL 460 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 PI + + R+L A+ L ++ F Sbjct: 461 PIKRGYLNAVLDLGVRYLYLAATHLHHVPEEGEVRVIQAEELADFWHHAPSTVIMGDFNA 520 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 E + + + Y + + RID+I SP Sbjct: 521 EPDSAEIAILRQAGFSDSLEGQTSVLTYH---------AADLYQRIDYIWASP------- 564 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDIP 264 ++ SDH +I + + Sbjct: 565 DIEYLDSYTVFSLASDHLAIIADIRLS 591 >gi|254477073|ref|ZP_05090459.1| endonuclease/exonuclease/phosphatase family protein [Ruegeria sp. R11] gi|214031316|gb|EEB72151.1| endonuclease/exonuclease/phosphatase family protein [Ruegeria sp. R11] Length = 242 Score = 54.0 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 39/275 (14%), Positives = 67/275 (24%), Gaps = 60/275 (21%) Query: 1 MSVVTVATWNVN---S--IRARIHNLAAWIKENNPDIICLQET--KTED--KNFPFETLQ 51 M + +AT+N+ +R R I+ D++ LQE + P L Sbjct: 11 MGRLRLATYNIQKSVGMDLRRRPRRTLKVIEGTGADLVLLQEADKRLPPRPAALPHFVLD 70 Query: 52 SLNYHIETCGQKS----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107 +HI G + I + + A F LR Sbjct: 71 EAGWHIVDLGGAGSLGWHGNAVIWRGDALRLVDQGHIPLPGLEPRGAVWARFETALGPLR 130 Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167 + +L + R E+ A P Sbjct: 131 VVGAHLGL-----------------------TTRARHEQVHHLARHIASEPDLPTVCAGD 167 Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227 E + +L+ + + A +D I Sbjct: 168 FNEWS--RQPVLDHIAPQLRFVPPKASFPALRPIGA-------------------LDRIA 206 Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 +S + + + R SDH PV L+ Sbjct: 207 VSRGL--RVVESGVYR-ARPAHVASDHLPVWADLE 238 >gi|229095084|ref|ZP_04226080.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-29] gi|229101186|ref|ZP_04231952.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-28] gi|229114038|ref|ZP_04243464.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock1-3] gi|228669497|gb|EEL24913.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock1-3] gi|228682314|gb|EEL36425.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-28] gi|228688414|gb|EEL42296.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-29] Length = 263 Score = 54.0 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 34/271 (12%), Positives = 62/271 (22%), Gaps = 19/271 (7%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET--KTEDKNFP----FETLQS 52 + + T N +S + +I LA I+E D+I LQE + +N + Sbjct: 1 MKLLTLNCHSWQEENQMEKIKYLAKVIQEEEYDVIALQEVSQSIQAENVCGNKKKDNFGL 60 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 L + + ++ + F + Sbjct: 61 LLLEELKALHVKDYNITWDFSHIGYDVYEEGLAIITKHTIIKEDTFFISENKDTTYWKTR 120 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 I D + + + + Sbjct: 121 KIVSATIAYNGKDITFYSCHLGWWNDEEESFQGQVDRLMERVDSNELSFLMGDFNNNARL 180 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 E + WD +RID I+ + Sbjct: 181 QGEGYEYLMQKGLYDTYELAIEKDEGTTVQGEIAGWD------ENKHNLRIDLIVCNQS- 233 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + S+++ SDH V V LDI Sbjct: 234 -KRVRSSKVIFNGTNRNVISDHFGVEVQLDI 263 >gi|218460813|ref|ZP_03500904.1| putative metal-dependent hydrolase protein [Rhizobium etli Kim 5] Length = 242 Score = 54.0 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 38/272 (13%), Positives = 73/272 (26%), Gaps = 52/272 (19%) Query: 4 VTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQETKT---------EDKNFPFET 49 + + T+NV+S + +A+ I E DII LQE + Sbjct: 6 IKLLTYNVHSCIGNDRKLDPGRIASVIAEAGADIIALQEVDVLRRRTGGVDQAHLIASLL 65 Query: 50 LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 ++H + G AI++ + + + + + L + Sbjct: 66 KMQAHFHPALSVAEEQYGDAIITALPTAAVKAGPLPSIGEQRGALSVEVLVGDRKLLVVN 125 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 G + + + P I GD+N IP Sbjct: 126 THLGLRGRDR------IRQMTTLLNSGWLRGTKDEPLPCILCGDFNAIPSSATYRLATRS 179 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 DA + + + +R+DHI ++ Sbjct: 180 LKDALLGGKAAP----------RATFPSRYPL-------------------MRLDHIFVT 210 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + + A + R SDH P+ + Sbjct: 211 DDLV--VQRATVLQN-RLTRVASDHLPLFAEI 239 >gi|120436892|ref|YP_862578.1| endonuclease/exonuclease/phosphatase family protein [Gramella forsetii KT0803] gi|117579042|emb|CAL67511.1| endonuclease/exonuclease/phosphatase family protein [Gramella forsetii KT0803] Length = 276 Score = 54.0 bits (128), Expect = 3e-05, Method: Composition-based stats. Identities = 35/264 (13%), Positives = 80/264 (30%), Gaps = 27/264 (10%) Query: 6 VATWNV---------NSIRARIHNLAAWIKENNPDIICLQE-TKTEDKNFPFETLQSLNY 55 V T+N+ NS R + I+ PD++ +QE K++ F E + + Sbjct: 24 VMTYNIKYANENDGENSWSQRKEWITDQIQFYEPDVLGVQEAVKSQLDFFT-ENINNYKV 82 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + + + V L I + + + L+ Sbjct: 83 LGVGREGEDKGEFSAILYKSDKFDVLKSNTFWLSETPEKISKGWDADYNRICTYALFQEK 142 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + ++ + R S +L +++ + + D E Sbjct: 143 ESEKKIWVFNTHFDHVGDKARLESSKLIIQKIKELNREALPVFLMGDFNLEQESEGIRLI 202 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 + + +S +K + ++ + RID+I + + Sbjct: 203 SEFMEKSKEKADFKFGPEGTFNGYNFTEAVT--------------RRIDYIFTNNQV--H 246 Query: 236 LHSARIDTKPRGWTKPSDHTPVIV 259 + + + + PSDH PV++ Sbjct: 247 IKKYAVLSDSKNLKYPSDHFPVLI 270 >gi|299145020|ref|ZP_07038088.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. 3_1_23] gi|298515511|gb|EFI39392.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. 3_1_23] Length = 289 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 38/284 (13%), Positives = 69/284 (24%), Gaps = 43/284 (15%) Query: 4 VTVATWNV-----------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52 + VA++NV N R L I ++ DI QE K N + L + Sbjct: 21 LNVASYNVRNSNPNDAKAGNGWEQRCPVLTRLITFHDFDIFGAQEVK---HNQLEDMLNA 77 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHL----PGDDLDVQARFIEATFTINTQTLRI 108 L + + L + + Sbjct: 78 LPQYSYIGVGRDDGKTKGEYAPIFYRKDKFKLLKSGNFWLSEDTSKPNKGWDAAYTRICT 137 Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168 + ++ + I R S +L + + G +I + Sbjct: 138 WGEFKDITGKFRFWFFNLHMDHIGVVARRESAKLVISKIKEMCGKDPVILTGDFNVDQTS 197 Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 + ++ + + + Y+ N RIDHI + Sbjct: 198 ESYQVLHESGILSDSYEVAQLRYATNGTCAGWNPNTYT----------PN---RIDHIFV 244 Query: 229 SPEATSLLHSARIDTKPRGWTK----------PSDHTPVIVSLD 262 + + + T PSDH PV L Sbjct: 245 TKNFA--VEKYGVLTDTYRIKNEATGKYEARIPSDHFPVKAVLK 286 >gi|154270790|ref|XP_001536249.1| predicted protein [Ajellomyces capsulatus NAm1] gi|150409823|gb|EDN05263.1| predicted protein [Ajellomyces capsulatus NAm1] Length = 1307 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 37/288 (12%), Positives = 76/288 (26%), Gaps = 43/288 (14%) Query: 2 SVVT----VATWNV-NSIRARIHNLAAWIK----ENNPDIICLQETKTEDKNFPFETLQS 52 + + + +NV NS AR+ + A + E+ D+I +QE +S Sbjct: 366 ATMRDTLNLLQYNVHNS--ARV--MGALLADPATEDKYDVIAVQEPSRNPHMLATHCPRS 421 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 + + + + + T + + Sbjct: 422 CGFWPAYHPETRP---RVCFLVNKRLVEHTWECHYHSEYIAVLTITTDLGKVQIVNVYAP 478 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 P G + + ++ + L + + + + + Sbjct: 479 PPGGYSSEPEESTIGQLQEVAGMGTDAELVILGDLNVHHERWGGVRVERNFRMAWQLI-- 536 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 D + T + W G ID LSP Sbjct: 537 -----------------AQVDRLGLQLATPVGATTWQDRGSP-----GTTIDLTFLSPLL 574 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 L I + K SDH P+ +L++ K+ + +N +P Sbjct: 575 HDKLRRCAIAEEA---CKGSDHKPIETTLELTPIPKEAERRNWKNAEP 619 >gi|147778987|emb|CAN62539.1| hypothetical protein VITISV_031160 [Vitis vinifera] Length = 1672 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 22/38 (57%), Gaps = 2/38 (5%) Query: 4 VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETK 39 + + + NV + +R + +++ NPD++ +QETK Sbjct: 668 MKIISXNVRGLGSRNKRRMVKDFLRSENPDVVMIQETK 705 >gi|94957776|gb|ABF47138.1| inositol phosphorylsphingolipid-phospholipase C [Cryptococcus neoformans var. grubii] Length = 529 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 44/260 (16%), Positives = 79/260 (30%), Gaps = 27/260 (10%) Query: 3 VVTVATWNVNSI------R-ARIHNLAAWIKENNPDIICLQETKT-EDKNFPFETLQ-SL 53 + V ++NV + R RIH +A ++ +N DI+CLQE +D E +Q +L Sbjct: 13 TLKVLSFNVWGLAIVAKNRHTRIHAIAEYLASSNYDIVCLQELWIYKDYEVVREEVQRNL 72 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIV-----------THLPGDDLDVQARFIEATFTIN 102 + +G+AI +++ I GD +A Sbjct: 73 PFSRFFHTGALGSGLAIFTRFPLIAAHALPYSLSGSPAQAFAGDFFVKKAAANVVILHPV 132 Query: 103 TQTLRIGNLYLP-HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161 + I N ++ G T+ +I+ + + GD+N P Sbjct: 133 LGEVEIWNTHMHAAGEHPPDTRQAHRIAQSWQLANAVRGGAAKGRYVFVMGDFNSQPWSI 192 Query: 162 DCYNPIIWENDACFTLEVRQ------SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW 215 +V S + YS + Sbjct: 193 PIAMMRDHAQLMDSFDQVHPSANSEISPPPSPAEALKVYGMTCDSPLNTYSAGKPIPEHV 252 Query: 216 SKNKGIRIDHIMLSPEATSL 235 + G R+D+I A + Sbjct: 253 LEKGGKRLDYIFFRQPAIAR 272 >gi|115351807|ref|YP_773646.1| endonuclease/exonuclease/phosphatase [Burkholderia ambifaria AMMD] gi|115281795|gb|ABI87312.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria AMMD] Length = 286 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 36/304 (11%), Positives = 78/304 (25%), Gaps = 61/304 (20%) Query: 4 VTVATWNV------NSI----R--ARIHNLAAWIKENNPDIICLQE-TKT--------ED 42 + + WNV + + R A L + D++C+QE T+ Sbjct: 1 MRLIDWNVQWGRDADGVVDLARTIAAARRLGDF------DVLCMQEVTRGFGALPGQPGP 54 Query: 43 KNFPFET--------LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLD----- 89 F +++ + + + + + L Sbjct: 55 DQFTELAALLPGYTIFEAIGADLPPLEPDAARRQFGNAIATRLPVGRVLRQLLPWPADAS 114 Query: 90 ---VQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEE 146 + +E T + LRI +L + D + R + + E Sbjct: 115 GPSMPRVALEVELTTPSGALRIITTHLEFYSARQRLAQVDAMRARHREACAHADQPAPAE 174 Query: 147 PLIFAGDYNIIPQPHDCYNPIIWENDACFT----LEVRQSFQKLQNMGFTDAIRATHDTH 202 + D+ + + + A T Sbjct: 175 NATGPFTATGQARDAIICGDFNSAFDSDAYRRLLEPIADAPSFVDAWVARHAGHTPPPTA 234 Query: 203 HLY--SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 +Y + W + D + ++ + ID R SDH PV++ Sbjct: 235 GVYDTAQWSDGPLA--------CDFVFVTDTLLPRVTRCEIDGDVR----ASDHQPVVLE 282 Query: 261 LDIP 264 +++ Sbjct: 283 VEVD 286 >gi|49479897|ref|YP_034699.1| endonuclease/exonuclease/phosphatase family protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|196045232|ref|ZP_03112464.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus 03BB108] gi|218901573|ref|YP_002449407.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus AH820] gi|225862411|ref|YP_002747789.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus 03BB102] gi|228925624|ref|ZP_04088713.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228931871|ref|ZP_04094767.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|229120029|ref|ZP_04249284.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus 95/8201] gi|229182756|ref|ZP_04309996.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BGSC 6E1] gi|49331453|gb|AAT62099.1| possible endonuclease/exonuclease/phosphatase family protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|196023816|gb|EDX62491.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus 03BB108] gi|218537236|gb|ACK89634.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus AH820] gi|225785970|gb|ACO26187.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus 03BB102] gi|228600729|gb|EEK58309.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BGSC 6E1] gi|228663495|gb|EEL19080.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus 95/8201] gi|228827851|gb|EEM73589.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228834102|gb|EEM79650.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 263 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 34/271 (12%), Positives = 63/271 (23%), Gaps = 19/271 (7%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET------KTEDKNFPFETLQS 52 + + T N +S + +I LA I+E D+I LQE K N + Sbjct: 1 MKLLTLNCHSWQEENQIEKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGL 60 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 L + + ++ +A F + Sbjct: 61 LLLEELKALHVKDYNITWDFSHIGYDVYEEGLAIITKHNVVKEDAFFISENKDTTYWKTR 120 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 I + + ++ + + Sbjct: 121 KIVSATIAYNGKNITFYSCHLGWWNDEEESFKDQVNRLMERVDSNELSFLMGDFNNNARL 180 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 E + WD +RID I+ + Sbjct: 181 QGEGYEYMMQEGLYDTYELAIEKDEGTTVQGEIAGWD------ENKHNLRIDLILCNRS- 233 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + S+++ SDH V V +DI Sbjct: 234 -EKIRSSKVVFNGTNRKVISDHFGVEVQVDI 263 >gi|305666477|ref|YP_003862764.1| putative exported phosphatase [Maribacter sp. HTCC2170] gi|88708744|gb|EAR00979.1| putative exported phosphatase [Maribacter sp. HTCC2170] Length = 545 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 41/262 (15%), Positives = 78/262 (29%), Gaps = 31/262 (11%) Query: 18 IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPI 77 + + IK+ PD++ L ET + +L YH + ++I+S++ Sbjct: 298 VERVVQTIKQAQPDVVALIETYGSGEIIAD----ALGYHFY----LISSNLSIMSRFPIN 349 Query: 78 EIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF 137 + + + + + + L N I + + ++ R Sbjct: 350 KTIKAFRPFNFGGAEINLGGGRRLTFLNTWLHYLPDYSKNVIEGAISAEDLINAEKETRQ 409 Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA 197 + L+E P +E + + + ++ Sbjct: 410 SEVESILKEIKPLHSKSGSNPV---IMLGDFNSGSHLDWIESTKGIHNGYTIDWPVSLAM 466 Query: 198 THDTHHLYSF--------------WDYYADSWSKNKGI--RIDHIMLSPEATSLLHSARI 241 + SF W A + S G+ RID+I + S I Sbjct: 467 INAGFKD-SFRELNINPLLDPGLTWTPRAATSSNEYGLRDRIDYIYYKGGLIP-IESKVI 524 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 D P PSDH VI D+ Sbjct: 525 DYHPL--MFPSDHAAVITVFDV 544 >gi|311109471|ref|YP_003982324.1| endonuclease/exonuclease/phosphatase family protein 2 [Achromobacter xylosoxidans A8] gi|310764160|gb|ADP19609.1| endonuclease/exonuclease/phosphatase family protein 2 [Achromobacter xylosoxidans A8] Length = 288 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 41/299 (13%), Positives = 91/299 (30%), Gaps = 46/299 (15%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENN-------PDIICLQETK----------TEDK 43 MS++ V ++N++ R+ + + E PD++ LQE + + + Sbjct: 1 MSLIRVVSYNIHKGRSALGR-RDSLNELRLGLYGLRPDLVFLQEVQGRNEQKSLLDAQHE 59 Query: 44 NFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 + + Y ++ +G A+LS++ ++ D Q + A + Sbjct: 60 SLAAALRLDVAYGRNAIRHETDHGNALLSRFPILDHENLDISDHRLEQRGLLHARIELGG 119 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI------- 156 + + ++L S + I+R + L + + Sbjct: 120 RAVHCFVVHLGLFAGSRSRQILALTERIRRMVPDGEPILIAGDFNDWGDRLAPLFVQQLG 179 Query: 157 -----IPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYY 211 P + D+ L + + Sbjct: 180 LYEVFSHAPRSHGGELPRLRDSVKRLSNALRGLPNGGVSVMERTNQLGMGD------SSR 233 Query: 212 -----ADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 ++ R+D I + SAR+ R W + SDH+P++ L++P Sbjct: 234 LLLPPPRTFPAVFPWFRLDRIY-QRGFA--VRSARVLRG-REWARLSDHSPLLAELELP 288 >gi|169342361|ref|ZP_02863427.1| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens C str. JGS1495] gi|169299481|gb|EDS81545.1| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens C str. JGS1495] Length = 262 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 47/276 (17%), Positives = 79/276 (28%), Gaps = 28/276 (10%) Query: 1 MSVVTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51 M + V T+N+ N R + IK++ PDII QE + + L Sbjct: 1 MRNLKVMTFNLKYDFKAQDNNEWSQRCLRITKLIKDHLPDIIGTQEGLIHMLDDMDDLLD 60 Query: 52 SLNY---HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108 ++ E G+ +N + L + + ++ ++ Sbjct: 61 EYSWVGEDREGNGKDEFNAIFFLKNKFEVLEWNQFWLSKTPNIKGSKDFNSSLPRICTKL 120 Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL-EEPLIFAGDYNIIPQPHDCYNPI 167 G I L+ ++ II +CY Sbjct: 121 KLKDKISGLKIDIYNTHLDHESELAREEGIKIILKEVKKNYKIYKTPYIIMGDFNCYLED 180 Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227 N F + + + H Y G ID+I+ Sbjct: 181 NLFNIIREEETNNTCFNVCYDNIKNNILGTFHYFKGGY-------------DGKIIDYIL 227 Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 S E + S ID + PSDH PVI L++ Sbjct: 228 YSKEYE--IKSLNIDDRKIDGGYPSDHYPVICELEL 261 >gi|148554832|ref|YP_001262414.1| endonuclease/exonuclease/phosphatase [Sphingomonas wittichii RW1] gi|148500022|gb|ABQ68276.1| Endonuclease/exonuclease/phosphatase [Sphingomonas wittichii RW1] Length = 230 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 33/270 (12%), Positives = 68/270 (25%), Gaps = 50/270 (18%) Query: 3 VVTVATWNVN-SI----RARIHNLAAWIKENNPDIICLQETK----TEDKNFPFETLQSL 53 ++TVA++N+ + R R + + E + DI+ LQE P E + Sbjct: 1 MITVASYNIRKGLGTDRRRRPDRILDVLHEIHADIVALQEADRRFGARQSALPAELISQG 60 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 Y + + + + +R+ L Sbjct: 61 EYKAVPFDIRPGG------------------IGWHGNAILVRHSVEIGDYEPIRLPTLEP 102 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + R + + + L + D Sbjct: 103 RGA-----------VMAELRVGGNDLRVVGMHLDLSGLWRRRQVRAIIDHIRRRRHRMPT 151 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 ++ + + T Y G +D I+L+P+ Sbjct: 152 VLMGDLNEWSLHGGCIREFAPELQIAPTGRSYH--SRRP------VGC-LDRIILTPDL- 201 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 L + + R SDH P+ ++ Sbjct: 202 -HLVACGVHVSERARL-ASDHLPIWARVNW 229 >gi|330429974|gb|AEC21308.1| hypothetical protein PT7_2768 [Pusillimonas sp. T7-7] Length = 284 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 48/298 (16%), Positives = 97/298 (32%), Gaps = 48/298 (16%) Query: 1 MSVVTVATWNVNSIRAR---IHNLAAW---IKENNPDIICLQETKTEDKN---------F 45 MSV+ V ++N++ R+ +L+ + +PD++ LQE + + F Sbjct: 1 MSVIRVVSYNIHKGRSATGGRESLSDLRLGLYGLHPDLLFLQEVQGRNDQRLSLDTQHEF 60 Query: 46 PFETLQ-SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 L Y + +G A+LS+Y +E D Q + A + Sbjct: 61 LAAALNMHAAYGCNAIRPHTDHGNALLSRYPILEHENQDISDHRLEQRGLLHALIEVQGV 120 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII------- 157 ++ ++L S + + IKR + L + ++ + Sbjct: 121 SVHCLVVHLGLFAGGRSRQVAALVERIKRMVPEGEPMLIAGDFNDWSNRLAPLFVQQLGL 180 Query: 158 -----------PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYS 206 P P + + + + + +G A R T Sbjct: 181 YEVFAIAPHHDPGPRLLRHSVTRLRNTLRGVSPTPLAATVHELGINGAARMTPPPRT--- 237 Query: 207 FWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 + ++ +R+D I + AR+ W + SDH P+ L++P Sbjct: 238 ----FPAAFP---WLRLDRIY-QRGFA--VRKARVLQGV-PWKQISDHAPLYAELELP 284 >gi|228963475|ref|ZP_04124632.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar sotto str. T04001] gi|228796169|gb|EEM43620.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar sotto str. T04001] Length = 263 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 35/271 (12%), Positives = 63/271 (23%), Gaps = 19/271 (7%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET--KTEDKNFP----FETLQS 52 + + T N +S + +I LA I+E D+I LQE + +N + Sbjct: 1 MKLLTLNCHSWQEENQIEKIQYLAKVIQEEEYDVIALQEVSQSIQAENVCGNKKKDNFGL 60 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 L + + ++ + F + Sbjct: 61 LLLEELKALHVKDYNITWDFSHIGYDVYEEGLAIITKHNIIKEDTFFISENEDTTYWKTR 120 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 I D + + + + Sbjct: 121 KIVSTTIAYNGKDITFYSCHLGWWNDEEESFKGQFDRLMERVDSNKLAFLMGDFNNNARL 180 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 E + WD +RID I+ + Sbjct: 181 EGEGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWD------ENKHSLRIDLILCNQS- 233 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +HS+++ SDH V V LDI Sbjct: 234 -KKVHSSKVIFNGTNRNVISDHFGVEVQLDI 263 >gi|42779563|ref|NP_976810.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus ATCC 10987] gi|42735479|gb|AAS39418.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus ATCC 10987] Length = 263 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 33/271 (12%), Positives = 62/271 (22%), Gaps = 19/271 (7%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET------KTEDKNFPFETLQS 52 + + T N +S + +I LA I+E D+I LQE K N + Sbjct: 1 MKLLTLNCHSWQEENQIEKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGL 60 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 L + + ++ + F + Sbjct: 61 LLLEELKALYVKDYNITWDFSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTTYWKTR 120 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 I + + ++ + + Sbjct: 121 KIVSATIAYNGKNITFYSCHLGWWNDEEESFKDQVNRLMERVDSNELSFLMGDFNNNARL 180 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 E + WD +RID I+ + Sbjct: 181 QGEGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWD------ENKHNLRIDLILCNRS- 233 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + S+++ SDH V V +DI Sbjct: 234 -EKVRSSKVIFNGTNRNVISDHFGVEVQVDI 263 >gi|196040092|ref|ZP_03107394.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus NVH0597-99] gi|196028947|gb|EDX67552.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus NVH0597-99] Length = 263 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 33/271 (12%), Positives = 62/271 (22%), Gaps = 19/271 (7%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET------KTEDKNFPFETLQS 52 + + T N +S + +I LA I+E D+I LQE K N + Sbjct: 1 MKLLTLNCHSWQEENQIEKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGL 60 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 L + + ++ + F + Sbjct: 61 LLLEELKALHVKDYNITWDFSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTTYWKTR 120 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 I + + ++ + + Sbjct: 121 KIVSATIAYNGKNITFYSCHLGWWNDEEESFKDQVNRLMERVDSNELSFLMGDFNNNARL 180 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 E + WD +RID I+ + Sbjct: 181 QGEGYEYMMQEGLYDTYELAIEKDEGTTVQGEIAGWD------ENKHNLRIDLILCNRS- 233 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + S+++ SDH V V +DI Sbjct: 234 -EKIRSSKVVFNGTNRKIISDHFGVEVQVDI 263 >gi|301615392|ref|XP_002937163.1| PREDICTED: transposon TX1 uncharacterized 149 kDa protein-like [Xenopus (Silurana) tropicalis] Length = 1131 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 37/263 (14%), Positives = 80/263 (30%), Gaps = 35/263 (13%) Query: 1 MSVVTVATWNVN--SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 M+V T+++ NV +A+ + ++K DI CLQE + Sbjct: 1 MAV-TISSLNVRCVGSKAKRAAVLDYLKSQKGDIFCLQECGLK----------------F 43 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + + + + + + + + + L + Y Sbjct: 44 SPLASEWGEGESIWSPSAENRNVGVGVLVKGNKTKVLSYSVLEPGRLLLVNLKYFDISFR 103 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + + + P++ AGD+N + D + + D Sbjct: 104 LFNVYAPVDKNARVELFEKMMFNFPGRGPVVIAGDFNCVLSKEDREGNLDFSLDVS---- 159 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 + +Q+ DA + D + +S++ S S RID ++S Sbjct: 160 SKMLSGIMQDFHLKDAFVSGGDVNDRFSWFSDAGVSKS-----RIDMFLIS-------SD 207 Query: 239 ARIDTKPRGWTKPSDHTPVIVSL 261 +++ SDH + L Sbjct: 208 IQVNKYVSFNNIFSDHRLLQCEL 230 >gi|284992406|ref|YP_003410960.1| endonuclease/exonuclease/phosphatase [Geodermatophilus obscurus DSM 43160] gi|284065651|gb|ADB76589.1| Endonuclease/exonuclease/phosphatase [Geodermatophilus obscurus DSM 43160] Length = 278 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 43/272 (15%), Positives = 77/272 (28%), Gaps = 18/272 (6%) Query: 4 VTVATWNVNSIR--ARIHN---LAAWIKENNPDIICLQETKTEDKNFPFETLQS-LNYHI 57 + V TWN+ R A + A + PD+ LQE + E L L H Sbjct: 7 LRVLTWNLW-WRFGAWQDRQTAIEAELAAARPDVCALQEVWIGPEGDQAELLAGRLGMHA 65 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 + I + ++ E R Sbjct: 66 VVAPSPAPGRWQRRLGDPAIGFANAVLSRWPITRSAVHELPAHPGEDGERTVLHAEIAAP 125 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 T + ++ ++E + A P ++D L Sbjct: 126 GGTVDVFTTQLDSAPDRSATRCAQVEEVVRFVAARAGTAHPPVVTGDLNAEPDSDEIRRL 185 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYY----ADSWSKNKGIRIDHIMLSPEAT 233 ++ + DA R ++ WD A ++ + RID++++ P Sbjct: 186 CGHKTAPVVPGTVLVDAWRYAGPDEAGWT-WDRRNPHVAATFEPSA--RIDYVLVGPPTA 242 Query: 234 ---SLLHSAR-IDTKPRGWTKPSDHTPVIVSL 261 + R + +P PSDH V+ L Sbjct: 243 GGRGHVRGVRLVGDRPVDGVWPSDHCGVLAEL 274 >gi|261336121|dbj|BAI44754.1| pol-like protein [Alternaria alternata] Length = 1186 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 32/281 (11%), Positives = 79/281 (28%), Gaps = 31/281 (11%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKE---NNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 S + + +NV R+R +A+ +++ ++ DII +QE T +H+ Sbjct: 5 SRLNILQYNVR--RSRDMVMASLLRDPEIDDFDIIAIQEPWTNPYTATTHHPAKDRFHLC 62 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + + + Q ++ T ++ + Sbjct: 63 YPTGDAEGSARVC-----------FFINKRMDQTKWRFEEQTKYMCSVVVEPSNERQEEG 111 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 +R R + A + ++ + + E Sbjct: 112 RLVIHNIYNPPRNRRDRRSTLPKAREALARHQAAEQILLGDFNLHHPLWGGLGRRETDPE 171 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 + + + + +F + S ID ++ + Sbjct: 172 AEDLIDIIGDFALHNTLP-----PGTITFEEGRMQSA-------IDLCYVTTGLIDRIIK 219 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMK 279 + +D R SDH P+ +LD+ R +++ + Sbjct: 220 SEVD---RNLDHDSDHLPISTALDLTVQRLEEKPRKAWKRL 257 >gi|301621930|ref|XP_002940297.1| PREDICTED: calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C-like [Xenopus (Silurana) tropicalis] Length = 1146 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 43/268 (16%), Positives = 86/268 (32%), Gaps = 28/268 (10%) Query: 5 TVATWNVNSIRARIH--NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 TVA++NVN + + + K+ I+ LQE+ ++ + P +L+ +Y Sbjct: 13 TVASYNVNGLNEPVKRAQIFGECKKAGYKIVMLQESHFKENHTPKISLK--HYPHIYLSN 70 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 + ++ +D + RF+ + N+Y+P+ I+ Sbjct: 71 NPVKKATGVITMVHKDLPFKQIATLIDKEGRFVLLKCYLGELICTFANVYVPNQGQISFL 130 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + K + + +++ Sbjct: 131 RQFMKTLANFKQGLLVLGGDFNLVLNPLTDSSS--------------GKSNISYKGLKEV 176 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 + L N D RA + ++ + +S RID+I S L +I Sbjct: 177 KKILSNAQIIDLWRAHNPKGRDFTHFSKTHSVYS-----RIDYIFASQYWLHLFAQTKI- 230 Query: 243 TKPRGWTKPSDHTPVIVSLDIPEPRKKQ 270 G SDH+P+ IP+ K + Sbjct: 231 ----GTGILSDHSPISSKFIIPKTTKTE 254 >gi|164423689|ref|XP_961780.2| hypothetical protein NCU07891 [Neurospora crassa OR74A] gi|157070199|gb|EAA32544.2| predicted protein [Neurospora crassa OR74A] Length = 411 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 47/357 (13%), Positives = 93/357 (26%), Gaps = 106/357 (29%) Query: 5 TVATWNVNSIRARI---------------------------------------------- 18 V +WN+N I A + Sbjct: 63 RVFSWNINGINAFLSSTPSARKITAYFTESTKTQKSGTSSTDAPPNASRPRTPPGQAPSG 122 Query: 19 --HNLAAWIKENN-PDIICLQETKTEDKNFPF---------ETLQSLNYHIETCGQKSYN 66 H+L A++ +N P+I+ LQE K + ++ P + Y + T + + Sbjct: 123 SPHSLRAFLARHNWPEILFLQELKIKPQDGPALLPRDKHNAKAFGGKLYGVGTIMRTDFA 182 Query: 67 GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK--- 123 + + + + A + T+ L + N+Y +G Sbjct: 183 RKWVATVREVDWDIEGRVSVVEMSGAPKGQDENEPVTKPLALINVYAVNGTTQPYRNPLT 242 Query: 124 --YDDKISWIKRFLRFASQRLELEEPLIFAGDYNII----------PQPHDCYNPIIWEN 171 L E + A ++++ P E Sbjct: 243 GAVHPNYPTRHDRKLVFHSLLRDECLSLEARGFSVVVAGDVNIARGPADGHPNLRTFPEQ 302 Query: 172 DACFTLEVRQSFQ------------------KLQNMGFTDAIRATHDTHHLYSFWDYYAD 213 ++ F + + D RA + Y+++ + Sbjct: 303 HCLNRVDFNTKFFGEEDNKRAGGCVGSQDEKNKKCLDAVDVFRAKYGMEKRYTYYPNRGE 362 Query: 214 SWSKNKGI-----RIDHIMLSPEATS--LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 R+D + +S E + I P+ PSDH P V + + Sbjct: 363 -------WGSSCDRVDMVFVSKEVWDDGRVIDTGILDTPQ-ERGPSDHVPFWVKVAL 411 >gi|301052087|ref|YP_003790298.1| putative endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis CI] gi|300374256|gb|ADK03160.1| possible endonuclease/exonuclease/phosphatase family protein [Bacillus cereus biovar anthracis str. CI] Length = 263 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 34/271 (12%), Positives = 63/271 (23%), Gaps = 19/271 (7%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET------KTEDKNFPFETLQS 52 + + T N +S + +I LA I+E D+I LQE K N + Sbjct: 1 MKLLTLNCHSWQEENQIEKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGL 60 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 L + + ++ +A F + Sbjct: 61 LLLEELKALHVKDYNITWDFSHIGYDVYEEGLAIITKHNVVKEDAFFISENKDTTYWKTR 120 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 I + + ++ + + Sbjct: 121 KIVSATIAYNGKNITFYSCHLGWWNDEEESFKDQVNRLVERVDSNELSFLMGDFNNNARL 180 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 E + WD +RID I+ + Sbjct: 181 QGEGYEYMMQEGLYDTYELAIEKDEGTTVQGEIAGWD------ENKHNLRIDLILCNRS- 233 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + S+++ SDH V V +DI Sbjct: 234 -EKIRSSKVVFNGTNRKVISDHFGVEVQVDI 263 >gi|38344432|emb|CAE05638.2| OSJNBa0038O10.4 [Oryza sativa Japonica Group] Length = 1045 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 39/271 (14%), Positives = 78/271 (28%), Gaps = 34/271 (12%) Query: 6 VATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 +WNV + AR + + + + ++ CLQETK ++ + Y ++ K Sbjct: 7 FISWNVRGLNSPARCNTVHEMMLDTKCNLACLQETKLQNIDDGLARFLG-GYKLDIFAFK 65 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 G L + + + T + T + +Y P + + + Sbjct: 66 PATGTRGGILILWNSATLVLQDIRISRFSISAQVTVPLTGATFLMTGVYGPTRHRLKDSF 125 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 E + GD+NII + D N + Sbjct: 126 LRHIRRLKP----------NAGEGWLLFGDFNIIYRARDKNNGNLNLARMRRFRATIDRC 175 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + + +++ W +D + H + Sbjct: 176 ELHEIPLQNRRFTWSNERQ-----WPTLVK---------LDRCFCNENWDLAFHHHVLHA 221 Query: 244 KPRGWTKPSDHTPVIVSLDIPEPRKKQQDST 274 P G PSDH P++ + P ++ T Sbjct: 222 LPTG---PSDHCPLV----LSNPAAPRKPRT 245 >gi|12957722|gb|AAK09240.1|AC084320_27 putative reverse transcriptase [Oryza sativa Japonica Group] gi|108711395|gb|ABF99190.1| retrotransposon protein, putative, LINE subclass [Oryza sativa Japonica Group] Length = 1135 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 34/264 (12%), Positives = 80/264 (30%), Gaps = 33/264 (12%) Query: 1 MSV---VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55 MS+ + +WNV + AR + + + + ++ CLQETK ++ + Y Sbjct: 102 MSMSHSLDFISWNVRVLNSPARCNTVHEMMLDTKCNLACLQETKLQNIDDGLTRFLG-GY 160 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 +++ K G L + + + T + +Y P Sbjct: 161 KLDSFAFKPATGTRGGIIILWNNAALILQDIRIGRFLISAQVMVPLTGATFLMTGVYGPT 220 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + + ++ + +N+ Sbjct: 221 RHRLKDAFLRHIRRLKPNAGEGW-----------------LLFGDFNMIYRARDKNNGNL 263 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 L + F+ + I + +++ ++ + +++DH + Sbjct: 264 NLARMRRFRATIDRCELREIPLQNK---RFTW----SNERQRPTLVKLDHCFCNENWDLA 316 Query: 236 LHSARIDTKPRGWTKPSDHTPVIV 259 H + P G PSDH P+++ Sbjct: 317 FHHHVLHALPTG---PSDHCPLVL 337 >gi|52144875|ref|YP_081954.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus E33L] gi|51978344|gb|AAU19894.1| possible endonuclease/exonuclease/phosphatase family protein [Bacillus cereus E33L] Length = 263 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 34/271 (12%), Positives = 63/271 (23%), Gaps = 19/271 (7%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET------KTEDKNFPFETLQS 52 + + T N +S + +I LA I+E D+I LQE K N + Sbjct: 1 MKLLTLNCHSWQEENQIEKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKKDNFGL 60 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 L + + ++ +A F + Sbjct: 61 LLLEELKALHVKDYNITWDFSHIGYDVYEEGLAIITKHNVVKEDAFFISENKDTTYWKTR 120 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 I + + ++ + + Sbjct: 121 KIVSATIAYNGKNITFYSCHLGWWNDEEESFKDQVNRLMERVDSNELSFLMGDFNNNARL 180 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 E + WD +RID I+ + Sbjct: 181 QGEGYEYMMQEGLYDTYELAIEKDEGTTVQGEIAGWD------ENKHNLRIDLILCNRS- 233 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + S+++ SDH V V +DI Sbjct: 234 -EKVRSSKVIFNGTNRNIISDHFGVEVQVDI 263 >gi|224542024|ref|ZP_03682563.1| hypothetical protein CATMIT_01197 [Catenibacterium mitsuokai DSM 15897] gi|224525081|gb|EEF94186.1| hypothetical protein CATMIT_01197 [Catenibacterium mitsuokai DSM 15897] Length = 267 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 37/276 (13%), Positives = 72/276 (26%), Gaps = 31/276 (11%) Query: 4 VTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQET------KTEDKN---FPFET 49 + + T N +S+ + ++ +A +I ++ D+ICLQE K+ + + Sbjct: 1 MKLMTLNTHSLSESDEKNKLQTIANFILNHDVDVICLQEVNQSMTAKSVSTDSSYVGRDI 60 Query: 50 LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFI-EATFTINTQTLRI 108 ++ NY + + E T T Sbjct: 61 IKEDNYALGLSRLLGDQYNWNYIPVKVGYDKFDEGVAIFSKYPIVNSENTLLTQTNDYSF 120 Query: 109 GNLYLPHGNPI---TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165 G + + + + + A + D Sbjct: 121 WKKRNSLGVELVKENTHFWVYTAHLGWWKDEEEPFINQWHKLKTIATKEVPVYLAGDFNA 180 Query: 166 PIIWENDACFTLEVRQSFQKLQ-NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRID 224 P I N + T++ F A WD G+RID Sbjct: 181 PDIIPNQSYTTIKEDGWFDTRDLADDVQGRFTAQGKIDG----WD------EAVDGMRID 230 Query: 225 HIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 +I + + S + SDH + + Sbjct: 231 YIWCNK--KEHVKSHHVIFDGTHEDVVSDHFGLFME 264 >gi|170733178|ref|YP_001765125.1| endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia MC0-3] gi|169816420|gb|ACA91003.1| Endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia MC0-3] Length = 284 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 41/301 (13%), Positives = 79/301 (26%), Gaps = 61/301 (20%) Query: 4 VTVATWNVN-------SI---R--ARIHNLAAWIKENNPDIICLQE-TKTED-------- 42 + + WN+ + R A I L + D++CLQE T+ D Sbjct: 1 MRLIDWNIQWGRDADGGVDLPRTVAAIRRLGDF------DVLCLQELTRGFDALPGRPGP 54 Query: 43 KNFPFETLQSLNYHIE-----------TCGQKSYNGVAILSKYQPIEIVTHLPGDD---- 87 F Y I + G AI ++ ++ L Sbjct: 55 DQFTELAALLPGYTIVDAIGADLPPIRPDAPRRQFGNAIATRLPVGRVLRQLLPWPADAG 114 Query: 88 -LDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEE 146 + ++ +LR+ +L + + D + R + + E Sbjct: 115 TPSMPRVALDIELQAPFGSLRVVTTHLEYYSARQRLAQVDALRDRHREACAHADQPAPAE 174 Query: 147 PLIFAGDYNIIPQPHDCYNPIIWENDACFT----LEVRQSFQKLQNMGFTDAIRATHDTH 202 P+ D+ + + + T Sbjct: 175 TPEGPFSATGQPRDAIVCGDFNSAFDSDAYRRFVEPIADAPSFVDAWIARHPGHTPPPTA 234 Query: 203 HLY--SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 +Y + W + D + ++ + ID R SDH PV++ Sbjct: 235 GIYDTAQWSDGPLA--------CDFVFVTDTLLPRVIGCEIDGDVR----ASDHQPVLLE 282 Query: 261 L 261 L Sbjct: 283 L 283 >gi|147790112|emb|CAN61031.1| hypothetical protein VITISV_003970 [Vitis vinifera] Length = 299 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 11/41 (26%), Positives = 23/41 (56%), Gaps = 2/41 (4%) Query: 4 VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTED 42 + + TWNV ++ + +I+ D++C+QETK ++ Sbjct: 110 MKIITWNVRGANDSSKRKIIKNYIRNQRVDLMCIQETKIQE 150 >gi|160937934|ref|ZP_02085292.1| hypothetical protein CLOBOL_02828 [Clostridium bolteae ATCC BAA-613] gi|158439160|gb|EDP16914.1| hypothetical protein CLOBOL_02828 [Clostridium bolteae ATCC BAA-613] Length = 290 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 47/294 (15%), Positives = 83/294 (28%), Gaps = 40/294 (13%) Query: 4 VTVATWNVNSIR-----ARIHNLAAWIKENNPDIICLQETKTEDKNFPFE--TLQSLNYH 56 + + T N +S+ +++ A + + PDII LQE P L+ Y Sbjct: 1 MKIMTLNTHSLAEPEYESKLAAFAGSLVQIKPDIIALQEVNQSRSAPPAASGWLRESGY- 59 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN----TQTLRIGNLY 112 C K N V+ + I H L + + +T + L Sbjct: 60 -VPCCAKDLNTVSPCASRAVIRADNHALNLALLLARAGVSYQWTWTPAKVGYGIYDEGLA 118 Query: 113 LPHGNPITSTKYDD----KISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168 + +PI T + + + E + ++ Sbjct: 119 VLSRSPILGTSQFYITGIRDYENWKTRKILGINTRTEYGNEYFYSVHMGWWNDSEEPFEG 178 Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY---SFWDYYADSWSKNKG----- 220 N L + F T L ++D Y + S++ G Sbjct: 179 QWNRISSGLSPLAEERLWLMGDFNSPAHITGQGRDLILASGWFDAYDLAASRDSGVTVAN 238 Query: 221 -------------IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +RID+I S + S+R + SDH +I Sbjct: 239 AIDGWREQGEIPGMRIDYIWTSRRVP--VISSRTIYDGTSFPVVSDHFGIITEY 290 >gi|149238650|ref|XP_001525201.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] gi|146450694|gb|EDK44950.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] Length = 547 Score = 53.6 bits (127), Expect = 3e-05, Method: Composition-based stats. Identities = 45/314 (14%), Positives = 91/314 (28%), Gaps = 40/314 (12%) Query: 3 VVTVATWNVNSIRA----RIHNLAAWIKEN--------NPDIICLQETKTED--KNFPFE 48 ++ + T+N ++ R H L A E + DI+ LQE E+ Sbjct: 105 LIKLLTFNTWGLKFVSKHRKHRLQAIADELANPKTVEDDYDIVALQEIWCEEDWDYLDRV 164 Query: 49 TLQSLNY-HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107 Y + G + G+AILSK +E + + A F + + ++ Sbjct: 165 CRNRYPYRRVFKSGIITGPGLAILSKQPIVETFLYRFPINGRSSAFFRGDWYVGKSISVT 224 Query: 108 IGN--------------LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGD 153 I ++ + F + + +I GD Sbjct: 225 IFQPHKEGSLPIALLNSHMHAPYGHGDASYSTHRACQAWDFAKLVRMLKKAGYAVIQVGD 284 Query: 154 YNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD 213 N P+ + + + + + + + Sbjct: 285 LNSKPESLPYKIFTVEGGLTDSWNVLHKDDLMNAAELAKLSPEDQIALGGV-TCNS-RLN 342 Query: 214 SWSKNKGI----RIDHIMLSPE----ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 +W KN+ + R+D+ ++ T+ + I KP SDH V + Sbjct: 343 TWRKNRRLSEACRLDYALIDANNIVPVTAGVKFTGILPKP-WLCSYSDHFAYSVEFLVSS 401 Query: 266 PRKKQQDSTSQNMK 279 + + N+ Sbjct: 402 VDEHKSPQIDHNLL 415 >gi|255513505|gb|EET89771.1| Endonuclease/exonuclease/phosphatase [Candidatus Micrarchaeum acidiphilum ARMAN-2] Length = 256 Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 29/272 (10%), Positives = 65/272 (23%), Gaps = 29/272 (10%) Query: 4 VTVATWNVNSIRARIHNLAAWI--KENNPDIICLQET-----------KTEDKNFPFETL 50 + + + NV R LA ++ K+ DI C QE K +++ Sbjct: 1 MRIVSLNVWGGRVYSK-LAEFLEGKKTGVDIFCFQEVLDANSKTGNEAKATKQSYQGTEF 59 Query: 51 QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 + ++ + N + + + V+ T Sbjct: 60 EE----VQDLYGRLENVLTGFRGFLSASYSEGSEKLAMFVRNGIEADVRTAWAHKQIRVL 115 Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170 + +Y + L + + E Sbjct: 116 YGGKPFEVGSIMQYAKISNDNGTCFIANVHGLWQGGGKEDTPERIEQSRNILRIMSSFGE 175 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230 + +M + + + + +KG D+I S Sbjct: 176 RKILCGDFNLDISTESVHMLEQETVNLVKEFKIN----STRSALAPSSKGRFADYIFASD 231 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + ++ + SDH P+ V + Sbjct: 232 KI--KINKFNVLNDV-----VSDHLPLYVDFE 256 >gi|228899090|ref|ZP_04063362.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis IBL 4222] gi|228860531|gb|EEN04919.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis IBL 4222] Length = 263 Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 34/271 (12%), Positives = 63/271 (23%), Gaps = 19/271 (7%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET--KTEDKNFP----FETLQS 52 + + T N +S + +I LA I+E D+I LQE + +N + Sbjct: 1 MKLLTLNCHSWQEENQIEKIQYLAKVIQEEEYDVIALQEVSQSIQAENVCGNKKEDNFGL 60 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 L + + ++ + F + Sbjct: 61 LLLEELKALHVKDYNITWDFSHIGYDVYEEGLAIITKHNIIKEDTFFISENEDTTYWKTR 120 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 + D + + + + Sbjct: 121 KIVSTTLAYNGKDITFYSCHLGWWNDEEESFKGQVDRLMERVDSNKLAFLMGDFNNNARL 180 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 E + WD +RID I+ + Sbjct: 181 KGEGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWD------ENKHSLRIDLILCNQS- 233 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +HS+++ SDH V V LDI Sbjct: 234 -KKVHSSKVIFNGTNRNVISDHFGVEVQLDI 263 >gi|147821635|emb|CAN72477.1| hypothetical protein VITISV_022513 [Vitis vinifera] Length = 705 Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 22/40 (55%), Gaps = 2/40 (5%) Query: 4 VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTE 41 + + +WNV ++ + +I+ D+IC+QETK + Sbjct: 330 MKILSWNVRGANDSSKRKVIKTFIRNQRVDVICIQETKIQ 369 >gi|254496441|ref|ZP_05109319.1| putative endonuclease/exonuclease/phosphatase family protein [Legionella drancourtii LLAP12] gi|254354337|gb|EET12994.1| putative endonuclease/exonuclease/phosphatase family protein [Legionella drancourtii LLAP12] Length = 242 Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 44/274 (16%), Positives = 85/274 (31%), Gaps = 47/274 (17%) Query: 4 VTVATWNVNSIRARIHNLAAWIKEN-NPDIICLQET------K--TEDKNFPFETLQSL- 53 + + T N+ R L +I + + DI CLQE K +DK L Sbjct: 1 MKLITLNLWGGHLRNP-LLKFIHHHKDIDIFCLQEVYHNAHRKIAVDDKELSLNIFSDLQ 59 Query: 54 -----NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108 +Y I ++ G+A+L K + I + N Q + Sbjct: 60 KLLPNHYAIFKPAVENVYGIAMLLKKNIEILSEGEINIHQKQHHPGIGENHSRNLQWVE- 118 Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168 +++++I I + R + + P + I P I Sbjct: 119 -------------CEFNNQIYSILNVHGLWNGRGKKDTPDRINQSHRIRHFMDTINTPQI 165 Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 D + + Q D + H + + + ++ D+I++ Sbjct: 166 LCGDFNLRPDTKSMHIIEQG---MDNLITRHKIRSTRTSYYKKEEKFA-------DYILI 215 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 SPE ++ + SDH P+ + + Sbjct: 216 SPEI-------SVNKFAVMNDEVSDHAPLYLDFN 242 >gi|162312263|ref|NP_596144.2| inositol phosphosphingolipid phospholipase C (predicted) [Schizosaccharomyces pombe 972h-] gi|20138888|sp|O74369|NSMA_SCHPO RecName: Full=Putative neutral sphingomyelinase gi|157310440|emb|CAB39367.2| inositol phosphosphingolipid phospholipase C (predicted) [Schizosaccharomyces pombe] Length = 424 Score = 53.3 bits (126), Expect = 3e-05, Method: Composition-based stats. Identities = 41/292 (14%), Positives = 85/292 (29%), Gaps = 34/292 (11%) Query: 4 VTVATWNVNSIR-------ARIHNLAAWIKENNPDIICLQETKTEDK--NFPFETLQSLN 54 + V ++N +R R+ + + + + DI+ LQE + +L Sbjct: 9 LRVLSFNCWGLRFVSKYRTERLKAVGEKLAKCDYDIVLLQEVWSIYDFQEIRNLVSCNLV 68 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 Y G+A+ SK+ IE + + QA + + + +L P Sbjct: 69 YSRFFHSAAMGAGLAMFSKFPIIESSMNKYPLNGRPQAFWRGDWYVGKG--VATASLQHP 126 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 G I+ + K + RL + + Sbjct: 127 SGRIISLFNTHLHAPYGKGADTYLCHRLSQAWYISKLLRAAVQRGHIVIAAGDFNIQPLS 186 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLY------------SFWDYYADSWSKNKGI- 221 E+ S+ + + + + + + D ++W +N Sbjct: 187 VPHEIITSYGLVNDAWLSVYPDQVEHPPNRFSMNDKELVEIAGTTCDSRLNTWRENISSK 246 Query: 222 --------RIDHIMLSPEA--TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 R+D++ SP ++ P+ SDH + L I Sbjct: 247 DMDDFVAKRLDYVFHSPSTCEAKNAKVVFLERVPKLDCSYSDHFAIETVLSI 298 >gi|171915191|ref|ZP_02930661.1| Endonuclease/exonuclease/phosphatase [Verrucomicrobium spinosum DSM 4136] Length = 331 Score = 53.3 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 45/268 (16%), Positives = 81/268 (30%), Gaps = 44/268 (16%) Query: 2 SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETK-TEDKNFPFETLQSLNYHIE 58 S + +AT N+ +R ++ L +++ PD++ LQE + P L+ L H Sbjct: 100 STLEIATINL--LRRNQNHAALETLLRDRQPDVVVLQEVSPGWAEMLPR--LKDLYPHQW 155 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + + + E V + + + A F Q + + N++ PH Sbjct: 156 LEYHRKGSWGLAILSRGAWEKVGLHKLGESGPKKLGMVAEFDFKGQPVSLLNVHAPHPTS 215 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + R Q+ +I AGD+N P + + + + Sbjct: 216 AAEIADRHVMHEEIRLWSVQRQQ--EGRAVIVAGDFNCTPWAWLYKDFLYQTHLVDTSQG 273 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 + + IDH+ +S + Sbjct: 274 RLFEATRHVWLPDRIM----------------------------IDHVFVSSDWKVSGRE 305 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIPEP 266 G SDH PV VSLD Sbjct: 306 V-------GPDFGSDHRPVFVSLDWDSS 326 >gi|327241370|gb|AEA40470.1| APEX nuclease 1 [Sus scrofa] Length = 51 Score = 53.3 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%) Query: 2 SVVTVATWNVNSIRARI-HNLAAWIKENNPDIIC 34 + + + +WNV+ +RA I W+KE PDI+ Sbjct: 13 ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILA 46 >gi|254719412|ref|ZP_05181223.1| Endonuclease/exonuclease/phosphatase family protein [Brucella sp. 83/13] gi|265984415|ref|ZP_06097150.1| endonuclease/exonuclease/phosphatase [Brucella sp. 83/13] gi|306839189|ref|ZP_07472006.1| Endonuclease/exonuclease/phosphatase family protein [Brucella sp. NF 2653] gi|264663007|gb|EEZ33268.1| endonuclease/exonuclease/phosphatase [Brucella sp. 83/13] gi|306405736|gb|EFM61998.1| Endonuclease/exonuclease/phosphatase family protein [Brucella sp. NF 2653] Length = 369 Score = 53.3 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 42/309 (13%), Positives = 78/309 (25%), Gaps = 75/309 (24%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQ--------SLNYHIETCGQKSYNGVAILSKYQP 76 I E DI+CLQE D + Y + + + ++ Sbjct: 65 IAETRADILCLQEV---DNLAALNAFEYGYLFKMIGYGYRHKYLIDGNDSRGIDVAVMMR 121 Query: 77 IEIVTHLPG------------------------------DDLDVQARFIEATFTINTQTL 106 P D + + I + L Sbjct: 122 DTTRDGQPIEVDEVTSHAHLTYSDFGLYQPELAELGIEPHDRIFKRDCLNVDLRIGGEPL 181 Query: 107 RIGNLYLPHGNPI----------TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI 156 + +L + + + + + E + GD+N Sbjct: 182 SLFVAHLKSMSGARNGLDGRTSSHPVRLAEARAVRRIIEEKFGIDRVAERRWLICGDFND 241 Query: 157 IPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS 216 + + +E + L GF + ++ + Sbjct: 242 YRERILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDRWTLYHTRGPLER 301 Query: 217 KNKGIRIDHIMLSPEATSLLHSA-------------------RIDTKPR-GWTKP--SDH 254 ++D+IM SP + A +D PR GW +P SDH Sbjct: 302 --HLCQLDYIMASPAFAAKNEHAVPDIIRRGQPWRTIFPPEQNVDRYPRTGWDRPKASDH 359 Query: 255 TPVIVSLDI 263 PV V+L++ Sbjct: 360 CPVSVTLNM 368 >gi|320167979|gb|EFW44878.1| predicted protein [Capsaspora owczarzaki ATCC 30864] Length = 879 Score = 53.3 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 45/290 (15%), Positives = 81/290 (27%), Gaps = 49/290 (16%) Query: 2 SVVTVATWNVN------SIRARIH--NLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 +TV T+NVN I A +A I+ + DI+CLQET + F +L+ + Sbjct: 410 RKLTVLTYNVNWGFCRMGI-ASQKVVQIAHGIRTSGADIVCLQETHHGWEQFLRSSLRDI 468 Query: 54 NYHIETCGQKS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 H+ + ++ S + H + Q + F L + Sbjct: 469 YPHMIFRHHDTVLPESNSVSSAGGQGFLSVHPLHELWYEQPPVAGSFFPGWMVELVVEGQ 528 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 + N + R L S E + + P+P N Sbjct: 529 PVQVLNVHLRPPISNVHKPSFRALFQTSSIRRAELQFFYD---RMKPKPGSAIIVAGDFN 585 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 + V D++ Sbjct: 586 EGHDGAAVVWLKGGRGKEPLNDSLIEFQPKTI---------------------------- 617 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRK-KQQDSTSQNMKP 280 + R+ ++ SDH PV+ + E R Q + ++ +P Sbjct: 618 ---RALNCRVMSEY---ELLSDHIPVVAEFALLESRPGGTQPAEAEQTQP 661 >gi|206968110|ref|ZP_03229066.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus AH1134] gi|228950924|ref|ZP_04113045.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229068121|ref|ZP_04201428.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus F65185] gi|229176958|ref|ZP_04304353.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus 172560W] gi|206737030|gb|EDZ54177.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus AH1134] gi|228606433|gb|EEK63859.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus 172560W] gi|228714935|gb|EEL66803.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus F65185] gi|228808651|gb|EEM55149.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 263 Score = 53.3 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 35/271 (12%), Positives = 63/271 (23%), Gaps = 19/271 (7%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET--KTEDKNFP----FETLQS 52 + + T N +S + +I LA I+E D+I LQE + +N + Sbjct: 1 MKLLTLNCHSWQEENQIEKIQYLAKVIQEEEYDVIALQEVSQSIQAENVCGNKKEDNFGL 60 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 L + + ++ + F + Sbjct: 61 LLLEELKALHVKDYNITWDFSHIGYDVYEEGLAIITKHNIIKEDTFFISENEDTTYWKTR 120 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 I D + + + + Sbjct: 121 KIVSTTIAYNGKDITFYSCHLGWWNDEEESFKGQVDRLMERVDSNKLAFLMGDFNNNARL 180 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 E + WD +RID I+ + Sbjct: 181 EGEGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWD------ENKHNLRIDLILCNQS- 233 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +HS+++ SDH V V LDI Sbjct: 234 -KKVHSSKVIFNGTNRNVISDHFGVEVQLDI 263 >gi|147804917|emb|CAN78049.1| hypothetical protein VITISV_015861 [Vitis vinifera] Length = 1600 Score = 53.3 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 11/37 (29%), Positives = 20/37 (54%), Gaps = 2/37 (5%) Query: 5 TVATWNVNSIRARIHN--LAAWIKENNPDIICLQETK 39 + +WN + +R + ++ NPD++ LQETK Sbjct: 705 KILSWNTRGLGSRKKRRTVRRFLSTQNPDVVMLQETK 741 >gi|291548571|emb|CBL24833.1| Metal-dependent hydrolase [Ruminococcus torques L2-14] Length = 284 Score = 53.3 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 28/286 (9%), Positives = 77/286 (26%), Gaps = 30/286 (10%) Query: 4 VTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQET--KTEDKNFPFETLQSL--- 53 + + T N +S+ + + PD++ LQE P L Sbjct: 1 MKLMTLNTHSLVESSYEEKKEKFIETLIAEQPDVVALQEVNQTASAGIIPDVMLAGYKRC 60 Query: 54 -NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 ++ + V + + + + +R+ Sbjct: 61 MDFGLPVREDNHAKEVVEALREKDVYYYWTWLSAKIGYGKYDEGMALLSKKPIMRVKQFL 120 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 + + + K + + + + + + + D Sbjct: 121 ISQTDDYDNWKTRKILGMQTEGSDDIFFTVHMGWWNDEEEPLKKQWEKMEKLTKSLEKKD 180 Query: 173 ACFTLEVRQS---------FQKLQNMGFTDAIRATHDTHHLYS-------FWDYYADSWS 216 L + ++ + G+ D+ + + D Sbjct: 181 RTIWLMGDFNSLDNVKQEGYELICESGWKDSYCLAEQKDSGVTVEEEIDGWRDGEGGGAV 240 Query: 217 KNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 K+ R+D+I + + + S+++ + + SDH VI+ ++ Sbjct: 241 KDA-KRLDYIFCNTQ--KKVKSSKVVCNGKNYPVVSDHYGVIIEVE 283 >gi|153809025|ref|ZP_01961693.1| hypothetical protein BACCAC_03329 [Bacteroides caccae ATCC 43185] gi|149128358|gb|EDM19577.1| hypothetical protein BACCAC_03329 [Bacteroides caccae ATCC 43185] Length = 315 Score = 53.3 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 45/294 (15%), Positives = 81/294 (27%), Gaps = 45/294 (15%) Query: 2 SVVTVATWNV-----------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETL 50 + +TVA++N+ N R +A ++ ++ DI QE E L Sbjct: 25 TSITVASYNLRNANGSDSAKGNGWGQRYPVIAKMVQYHDFDIFGTQECFIHQLKDMKEAL 84 Query: 51 QSLNY-HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 +Y + K + + V L + + Sbjct: 85 PGYDYIGVGRDDGKEKGEHSAIFYRTDKFDVIEKGDFWLSETPDVPSKGWDAVLPRICSW 144 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 + ++ + I + R S L ++ + Sbjct: 145 GHFKCKDTGFEFLFFNLHMDHIGKKARVESAYLVQDKMKELGKGKELP----AILTGDFN 200 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 + + + S L + R + +F D+ DS+++ RIDH+ +S Sbjct: 201 VDQTHQSYDAFVSKGVLCDSYEKCDFRYATNG----TFNDFDPDSFTE---SRIDHVFVS 253 Query: 230 PEATSL--------------------LHSA--RIDTKPRGWTKPSDHTPVIVSL 261 P ID K PSDH PV V L Sbjct: 254 PVFKVKRYGVLTDTYRSIRGNGGKKDATDCPEEIDIKAYQARTPSDHFPVKVEL 307 >gi|229077725|ref|ZP_04210355.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock4-2] gi|228705666|gb|EEL58022.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock4-2] Length = 263 Score = 53.3 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 35/271 (12%), Positives = 63/271 (23%), Gaps = 19/271 (7%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET--KTEDKNFP----FETLQS 52 + + T N +S + +I LA I+E D+I LQE + +N + Sbjct: 1 MKLLTLNCHSWQEENQIEKIQYLAKVIQEEEYDVIALQEVSQSIQAENVCGNKKEDNFGL 60 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 L + + ++ + F + Sbjct: 61 LLLEELKALHVKDYNITWDLSHIGYDVYEEGLAIITKHNIIKEDTFFISKNEDTTYWKTR 120 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 I D + + + + Sbjct: 121 KIVSTTIAYNGKDITFYSCHLGWWNDEEESFKGQVDRLMERVDSNKLAFLMGDFNNNAWL 180 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 E + WD +RID I+ + Sbjct: 181 EGEGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWD------ENKHNLRIDLILCNQS- 233 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +HS+++ SDH V V LDI Sbjct: 234 -KKVHSSKVIFNGTNRNVISDHFGVEVQLDI 263 >gi|326678662|ref|XP_003201131.1| PREDICTED: transposon TX1 uncharacterized 149 kDa protein-like [Danio rerio] Length = 1326 Score = 53.3 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 38/264 (14%), Positives = 72/264 (27%), Gaps = 28/264 (10%) Query: 1 MSVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 M V + T N+N R L +IK D+ +QE+ +++ N E ++ + Sbjct: 1 MRVFNIGTLNLNGARDSQKRMCLFEFIKMKRLDVTFIQESHSDNLN---EINWKKDWDGQ 57 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 ++ + + V+ RF++ T+ N+Y P+ Sbjct: 58 IFMSHLAYNSGGVAVLFSKTVSPLSVETEEIVKGRFLKVKVKFEHATMVFLNIYAPNKGA 117 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 I L + + + +N Sbjct: 118 ERIIFLKKFCDVINNVDSEDLLFLGGDFNCTENDKMDRNNLEPHNASQKEMKNLVQVCD- 176 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLH 237 D R H Y++ S + R+D + + + Sbjct: 177 ------------LCDVWRNVHLNDRQYTW----VHSKDNQISMARLDRFYMFKFQINYVK 220 Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261 RI SDH VI + Sbjct: 221 DCRIIP-----VLFSDHCAVICKI 239 >gi|166710547|ref|ZP_02241754.1| hypothetical protein Xoryp_03535 [Xanthomonas oryzae pv. oryzicola BLS256] Length = 288 Score = 53.3 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 33/271 (12%), Positives = 64/271 (23%), Gaps = 26/271 (9%) Query: 4 VTVATWNV------NS---IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 + V ++NV + R ++ A IK+ +PD+ QE E + L + Sbjct: 35 LRVMSFNVRVPVDSDGDKRWTVRRTSMVALIKQTHPDVFGTQELVQEQAQYLASHLPAYR 94 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 + + + + V L ++ + Sbjct: 95 WFGKGRRADGSDEHMGVFYDSNALSVIESGDFWLSETPEVPGSSSWNTDLPRMVTWALFE 154 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 N R + + +P + +D Sbjct: 155 RRNDTRRFYL----LNTHLPHRDQDEAAREHGARVILSRIATLPADIPVVVTGDFNSDPD 210 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 + + T ++ RID I+ T Sbjct: 211 QGTYRTLTAVLGDARAHVAKPQGPEKTFQDFTTQPTR----------RIDWILF-RGLTP 259 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 G PSDH PV+ + P+ Sbjct: 260 --TRFSTLDARPGGILPSDHYPVLAEFEWPQ 288 >gi|30018623|ref|NP_830254.1| exodeoxyribonuclease III [Bacillus cereus ATCC 14579] gi|218231797|ref|YP_002365209.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus B4264] gi|228956830|ref|ZP_04118615.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar pakistani str. T13001] gi|229042269|ref|ZP_04190021.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH676] gi|229125865|ref|ZP_04254890.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-Cer4] gi|229143158|ref|ZP_04271590.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST24] gi|296501195|ref|YP_003662895.1| exodeoxyribonuclease III [Bacillus thuringiensis BMB171] gi|29894164|gb|AAP07455.1| Exodeoxyribonuclease III [Bacillus cereus ATCC 14579] gi|218159754|gb|ACK59746.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus B4264] gi|228640239|gb|EEK96637.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST24] gi|228657523|gb|EEL13336.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-Cer4] gi|228727060|gb|EEL78265.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH676] gi|228802871|gb|EEM49704.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar pakistani str. T13001] gi|296322247|gb|ADH05175.1| exodeoxyribonuclease III [Bacillus thuringiensis BMB171] Length = 263 Score = 53.3 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 35/271 (12%), Positives = 63/271 (23%), Gaps = 19/271 (7%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET--KTEDKNFP----FETLQS 52 + + T N +S + +I LA I+E D+I LQE + +N + Sbjct: 1 MKLLTLNCHSWQEENQIEKIQYLAKVIQEEEYDVIALQEVSQSIQAENVCGNKKKDNFGL 60 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 L + + ++ + F + Sbjct: 61 LLLEELKALHVKDYNITWDFSHIGYDVYEEGLAIITKHNIIKEDTFFISENEDTTYWKTR 120 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 I D + + + + Sbjct: 121 KIVSTTIAYNGKDITFYSCHLGWWNDEEESFKGQVDRLMERVDSNKLAFLMGDFNNNARL 180 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 E + WD +RID I+ + Sbjct: 181 KGEGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWD------ENKHNLRIDLILCNQS- 233 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +HS+++ SDH V V LDI Sbjct: 234 -KKVHSSKVIFNGTNRNVISDHFGVEVQLDI 263 >gi|188591189|ref|YP_001795789.1| metal dependent endonuclease/phosphatase [Cupriavidus taiwanensis LMG 19424] gi|170938083|emb|CAP63067.1| putative metal dependent endonuclease/phosphatase [Cupriavidus taiwanensis LMG 19424] Length = 260 Score = 53.3 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 37/270 (13%), Positives = 72/270 (26%), Gaps = 42/270 (15%) Query: 4 VTVATWNVN----SI--RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57 + V T+N++ I R RI N+ A + + DI+ LQE + + L Sbjct: 3 LRVVTYNIHKGVTGIARRPRIQNVRAGLHAMDADIVFLQEVQDRNDRLVAAAL------- 55 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 + + Y + D + + ++ L I + Sbjct: 56 -FDPEHTQLNYLATDAYPHSVYGRNAVYDYGHHGNAILSRHPILMSENLDISDHRFEQRG 114 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDY--NIIPQPHDCYNPIIWENDACF 175 + + + + F + N++P + ND Sbjct: 115 LLHAVADVHGVETHLICVHFGLFARSRARQAEALVERVKNVVPADVPLVIAGDF-NDWNH 173 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 L+ + H +W +D I + Sbjct: 174 RLDAQICNTLGAVEASHARGARLHTFPSHMPWWQ-------------LDRIYV------- 213 Query: 236 LHSARIDTKP----RGWTKPSDHTPVIVSL 261 I+ R W + SDH P++ L Sbjct: 214 -RGYEIERAHALTGRDWAQRSDHVPLVAEL 242 >gi|119626446|gb|EAX06041.1| hCG1777785 [Homo sapiens] Length = 282 Score = 53.3 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 34/92 (36%), Gaps = 12/92 (13%) Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR 246 D R H Y+F+ ++SK IDHI+ S S I T Sbjct: 75 HQADLIDIYRTLHPISTEYTFFSAPHHTYSK-----IDHILGSKALLSKCKRTEIITNCL 129 Query: 247 GWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278 SDH+ + L++ + Q ST+ + Sbjct: 130 -----SDHSAI--KLELRMKKLTQNRSTTWKL 154 >gi|75759165|ref|ZP_00739268.1| Endonuclease/Exonuclease/phosphatase family protein [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74493327|gb|EAO56440.1| Endonuclease/Exonuclease/phosphatase family protein [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 267 Score = 53.3 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 34/273 (12%), Positives = 64/273 (23%), Gaps = 19/273 (6%) Query: 2 SVVTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET--KTEDKNFP----FETL 50 + + + T N +S + +I LA I+E D+I LQE + +N + Sbjct: 3 NNMKLLTLNCHSWQEENQIEKIQYLAKVIQEEEYDVIALQEVSQSIQAENVCGNKKEDNF 62 Query: 51 QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 L + + ++ + F + Sbjct: 63 GLLLLEELKALHVKDYNITWDFSHIGYDVYEEGLAIITKHNIIKEDTFFISENEDTTYWK 122 Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170 + D + + + + Sbjct: 123 TRKIVSTTLAYNGKDITFYSCHLGWWNDEEESFKGQVDRLMERVDSNKLAFLMGDFNNNA 182 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230 E + WD +RID I+ + Sbjct: 183 RLKGEGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWD------ENKHSLRIDLILCNQ 236 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +HS+++ SDH V V LDI Sbjct: 237 S--KKVHSSKVIFNGTNRNVISDHFGVEVQLDI 267 >gi|47567194|ref|ZP_00237908.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus G9241] gi|47556037|gb|EAL14374.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus G9241] Length = 263 Score = 53.3 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 33/271 (12%), Positives = 61/271 (22%), Gaps = 19/271 (7%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET------KTEDKNFPFETLQS 52 + + T N +S + +I LA I+E D+I LQE K N + Sbjct: 1 MKLLTLNCHSWQEENQIEKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGL 60 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 L + + ++ + F + Sbjct: 61 LLLEELKALHVKDYNITWDFSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTTYWKTR 120 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 I + + + + + Sbjct: 121 KIVSATIAYNGKNITFYSCHLGWWNDEEESFKGQVNRLMEHVDSNEISFLMGDFNNNARL 180 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 E + WD +RID I+ + Sbjct: 181 QGEGYEYMMQKGLHDTYELAIEKDEGTTVQGEIAGWD------ENKHNLRIDLILCNRS- 233 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + S+++ SDH V V +DI Sbjct: 234 -EKVRSSKVIFNGTNRNIISDHFGVEVQVDI 263 >gi|182415509|ref|YP_001820575.1| endonuclease/exonuclease/phosphatase [Opitutus terrae PB90-1] gi|177842723|gb|ACB76975.1| Endonuclease/exonuclease/phosphatase [Opitutus terrae PB90-1] Length = 298 Score = 53.3 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 38/274 (13%), Positives = 78/274 (28%), Gaps = 38/274 (13%) Query: 4 VTVATWNVNSIR-----------ARIHNLAAWIKENNPDIICLQE-TKTEDKNFPFETLQ 51 + V ++N +R R + I++ PD+I QE T+ ++ + Sbjct: 43 LRVMSFN---LRFASPQPPHAWPERRPIMQHVIEQTAPDLIGTQEGLYTQLRDLAADLPA 99 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 Y G++ + ++ + E + D + R Sbjct: 100 ---YEWIGLGREGGSRGEFMAVFYRRERFEPVAFDHFWLSDTPDVIGSMTWGNNYRRMVT 156 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP----QPHDCYNPI 167 ++ + ++ + + A Q+ + A +P +C Sbjct: 157 WVRFRERASGREFYFWNTHFDHEVETARQKAAILIRDRLAQLDASVPLLLVGDFNCAAGN 216 Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227 + + H+ ++ G+RID I+ Sbjct: 217 SPAYETLTREAGLTDTWTAATARVNEGFNTFHNYEP------------PRHDGVRIDWIL 264 Query: 228 L-SPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 +P A A I T PSDH PV+ Sbjct: 265 ARTPSAVPR---AEIVTYRENGQTPSDHFPVLAD 295 >gi|325529413|gb|EGD06334.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. TJI49] Length = 269 Score = 53.3 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 31/249 (12%), Positives = 62/249 (24%), Gaps = 21/249 (8%) Query: 24 WIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ-----KSYNGVAILSKYQPIE 78 I PD+ +QE K D N L + G ++ VAI + Sbjct: 29 LIDALRPDVFLMQEAKGLDAN-GHARLHEWERRLSMRGFLGVAPRTGQNVAIFIRAPLRA 87 Query: 79 IVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFA 138 + + ++ + + +L P ++ + Sbjct: 88 LSFEVDNTHFHHAMAMLKVEVPGGAAPITFVSTHLCPNGPQIRQAEAAYLTALAAPDALT 147 Query: 139 SQRLELEEPLIF----AGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQ-NMGFTD 193 + A + P Y + + + Sbjct: 148 LIGGDFNSASPHDPEPADWGGLAPHHRARYLAEDLSGIDRSVIARLDAAGLVDLGRRLHG 207 Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253 + T Y ++ +R D++ S + P + SD Sbjct: 208 SGIPTVPAAG------YREAEFAT---MRCDYLFASKALVERARRYEVLRTP-ETERASD 257 Query: 254 HTPVIVSLD 262 H PV++ LD Sbjct: 258 HYPVLLQLD 266 >gi|188575171|ref|YP_001912100.1| endonuclease/exonuclease/phosphatase family [Xanthomonas oryzae pv. oryzae PXO99A] gi|188519623|gb|ACD57568.1| endonuclease/exonuclease/phosphatase family [Xanthomonas oryzae pv. oryzae PXO99A] Length = 319 Score = 53.3 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 33/271 (12%), Positives = 64/271 (23%), Gaps = 26/271 (9%) Query: 4 VTVATWNV------NS---IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 + V ++NV + R ++ A IK+ +PD+ QE E + L + Sbjct: 66 LRVMSFNVRVPMDSDGDKRWTVRRTSMVALIKQAHPDVFGTQELVPEQAQYLASHLPAYR 125 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 + + + + V L ++ + Sbjct: 126 WFGKGRRADGSDEHMGVFYDSNALSVIESGDFWLSETPEVPGSSSWNTDLPRMVTWALFE 185 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 N R + + +P + +D Sbjct: 186 RRNDKRRFYL----LNTHLPHRDQDEAAREHGARVILSRIATLPADIPVVVTGDFNSDPD 241 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 + + T ++ RID I+ T Sbjct: 242 QGTYRTLTAVLGDARAHVAKPQGPEKTFQNFTTQPTR----------RIDWILF-RGLTP 290 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 G PSDH PV+ + P+ Sbjct: 291 --TRFSTLDARPGGILPSDHYPVLAEFEWPQ 319 >gi|163761164|ref|ZP_02168241.1| Endonuclease/exonuclease/phosphatase [Hoeflea phototrophica DFL-43] gi|162281715|gb|EDQ32009.1| Endonuclease/exonuclease/phosphatase [Hoeflea phototrophica DFL-43] Length = 346 Score = 53.3 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 28/306 (9%), Positives = 69/306 (22%), Gaps = 60/306 (19%) Query: 17 RIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75 N + + E N D+I LQE ++D+ Y + Sbjct: 37 AKKNWIITLLSEMNADVIGLQEVVSQDELKALLAANGYPYFYCPVAPAFDADDPEIYVNA 96 Query: 76 PIEI-VTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRF 134 + I + + T+ + R + + + Sbjct: 97 TVAIASRYPFISAEPLSGVAGVPQDTVIDEDFRFSRTPVDAVIDLPGIGQTRFFVCHFKS 156 Query: 135 LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDA 194 ++ + A + + F++ + Sbjct: 157 QGAFVDDEIIDGLADWGDKIRTTYMERAMAGVNQVAKRAAEAGAIYRMFRQSIDADADAP 216 Query: 195 IRATHD---------------THHLYSFWDYYAD------SWSKNK-------------- 219 + D ++S+ A+ ++ K+ Sbjct: 217 VILLGDLNEDPASHTISILTQADRVWSWGSVAANGIPDPFAFLKHVYKLYDAFNLVPMQG 276 Query: 220 ------------GIRIDHIMLSPEATSL-------LHSARIDTKPRG----WTKPSDHTP 256 G +D++++S + + + SDH P Sbjct: 277 FVRPNTHGGVGSGSTLDYVVVSNGLNPKNPRRRGEVAKVEVYDDHFAAGLPKDRSSDHAP 336 Query: 257 VIVSLD 262 VI ++ Sbjct: 337 VIATIK 342 >gi|110633851|ref|YP_674059.1| endonuclease/exonuclease/phosphatase [Mesorhizobium sp. BNC1] gi|110284835|gb|ABG62894.1| Endonuclease/exonuclease/phosphatase [Chelativorans sp. BNC1] Length = 370 Score = 53.3 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 41/309 (13%), Positives = 74/309 (23%), Gaps = 75/309 (24%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLP 84 I DI+CLQE D + Y + Y + I + Sbjct: 66 IAATRADILCLQEV---DNQAALNAFE-YGY-LHKMIGAGYREKYSSAGNDARGIDVAIM 120 Query: 85 GDDLDVQARFIEATFTINTQTLRIGNLYLPH------GNPITSTKYDDKISWIKRFLRFA 138 IE + + L G + + + Sbjct: 121 MRRQTADGEPIEFRRMTTHAHITFDDFNLYTPELAELGLGPNERIFRRDCLEVDVLVGGK 180 Query: 139 SQRLELEEPLIFA-------GDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191 + + G +P + + F E + + Sbjct: 181 PLTIYIVHFKAMNSVRNGRDGRLGSMPIRIAEASAVRRIILDRFGPEGTARKRWMICGDL 240 Query: 192 TDAIRATHDTHHLYSFWDYYA-------------DSWSKNKGIR---------------- 222 D ++ +D+ + +N R Sbjct: 241 NDYRERVLIEGEAHTGYDFRPVREAQSSVNVLTDGGFCENVVERRPELDRWTLYHTRGPE 300 Query: 223 ------IDHIMLSPEATSL--------LHSA-----------RIDTKPR-GWTKP--SDH 254 +D+I+LSP + + ++ PR GW +P SDH Sbjct: 301 ERHLCQLDYILLSPALAQKNGKVMPDIVRNGQPWRTIFPPGQEVERYPRTGWDRPKASDH 360 Query: 255 TPVIVSLDI 263 PV +SLD+ Sbjct: 361 CPVAISLDL 369 >gi|195620344|gb|ACG32002.1| hypothetical protein [Zea mays] Length = 207 Score = 53.3 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 4/41 (9%) Query: 5 TVATWNVNSIRARIH----NLAAWIKENNPDIICLQETKTE 41 TWN NS+ R+ + + +PD+IC+QE + Sbjct: 52 KFLTWNANSLLLRMKSDWPAFSQLVARLDPDVICVQEVRMP 92 >gi|194699264|gb|ACF83716.1| unknown [Zea mays] Length = 166 Score = 53.3 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 4/41 (9%) Query: 5 TVATWNVNSIRARIH----NLAAWIKENNPDIICLQETKTE 41 TWN NS+ R+ + + +PD+IC+QE + Sbjct: 52 KFLTWNANSLLLRMKSDWPAFSQLVARLDPDVICVQEVRMP 92 >gi|167762675|ref|ZP_02434802.1| hypothetical protein BACSTE_01033 [Bacteroides stercoris ATCC 43183] gi|167699015|gb|EDS15594.1| hypothetical protein BACSTE_01033 [Bacteroides stercoris ATCC 43183] Length = 370 Score = 53.3 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 44/266 (16%), Positives = 83/266 (31%), Gaps = 25/266 (9%) Query: 4 VTVATWNV----NSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 +TVAT+NV N I +A ++++ + D++C QE E+K+F ++L+ H + Sbjct: 114 LTVATYNVHNFGNEITGYSCKQIAKYMQQQHVDVLCFQEF-GENKHFTADSLRRALSHWQ 172 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIE---ATFTINTQTLRIGNLYLPH 115 + + + + + G + +NT T+R+ N +L Sbjct: 173 YAIIPADDSIRGILPIAVFSRYPLIGGRFITYPHSANCSMLCDIILNTDTIRLLNNHLQT 232 Query: 116 ---GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 + + +R + E + Sbjct: 233 TSVSQNRKKWERELAADNTRREAQAVQDAAETLHENFVKRAFQTDSICQLATASPHPVLV 292 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 + S+ + T ++Y+ Y +RID+ SPE Sbjct: 293 CGDFNSLPSSYTYHRFSESLKDGFKTGGHGYMYT---YRYGKRM----LRIDYAFHSPEL 345 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVI 258 D SDH PVI Sbjct: 346 ECT------DYYSPNLDLCSDHNPVI 365 >gi|172065587|ref|YP_001816299.1| endonuclease/exonuclease/phosphatase [Burkholderia ambifaria MC40-6] gi|171997829|gb|ACB68746.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria MC40-6] Length = 269 Score = 53.3 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 43/262 (16%), Positives = 67/262 (25%), Gaps = 47/262 (17%) Query: 4 VTVATWNVNS------IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57 + +AT+N+ RA H +A I E + D+I LQE L Sbjct: 29 LRIATYNIRGGYGKWHTRAA-HRIAQVIHELDADVIALQEV-------------PLGGTH 74 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 + I T V +R + Sbjct: 75 APDVLAHLRDATGMHAVAGPTIDTPERRYGNAVLSRCPIRAARTLDLSFH---------Q 125 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 D I +R + L L A ++ P+I D Sbjct: 126 REPRGALDADIDCSAGMIRVVATHLGLSASERSAQVQRLLAAFDTGAMPVILMGDINEWF 185 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 ++ Q L T T LY + +D I + P L Sbjct: 186 VRGRALQALVTRFRRAPAPRTFPT--LYPVFS-------------LDRIWIHPG--EWLV 228 Query: 238 SARIDTKPRGWTKPSDHTPVIV 259 + R + SDH P++ Sbjct: 229 DVNVHRSMRAR-RASDHYPLVA 249 >gi|238594682|ref|XP_002393552.1| hypothetical protein MPER_06696 [Moniliophthora perniciosa FA553] gi|215461202|gb|EEB94482.1| hypothetical protein MPER_06696 [Moniliophthora perniciosa FA553] Length = 164 Score = 53.3 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 23/87 (26%), Positives = 45/87 (51%), Gaps = 2/87 (2%) Query: 3 VVTVATWNVNSI-RARIHNLAAWIKENNPDIICLQETKTEDKNF-PFETLQSLNYHIETC 60 + A WNV + ++ +++ +PDI+ L ETK ++ P + + + + Sbjct: 69 TLRFACWNVCGLATSQKKGFKFYVEAEDPDILVLTETKMNNEPVDPSLSSRFPHRYWSIA 128 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDD 87 +K Y+G A+LSK++P+ + LPG Sbjct: 129 EKKGYSGTAVLSKHKPLSVDKTLPGHP 155 >gi|107029003|ref|YP_626098.1| endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia AU 1054] gi|116689839|ref|YP_835462.1| endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia HI2424] gi|105898167|gb|ABF81125.1| Endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia AU 1054] gi|116647928|gb|ABK08569.1| Endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia HI2424] Length = 284 Score = 53.3 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 41/301 (13%), Positives = 80/301 (26%), Gaps = 61/301 (20%) Query: 4 VTVATWNV------NSI----R--ARIHNLAAWIKENNPDIICLQE-TKTED-------- 42 + + WN+ + + R A I L + D++CLQE T+ D Sbjct: 1 MRLIDWNIQWGRDADGVVDLPRTVAAIRRLGDF------DVLCLQELTRGFDALSGRPGP 54 Query: 43 KNFPFETLQSLNYHIE-----------TCGQKSYNGVAILSKYQPIEIVTHLPGDD---- 87 F Y I + G AI ++ ++ Sbjct: 55 DQFAELAALLPGYTIVDAIGADLPAIRPGAPRRQFGNAIATRLPVGRVLRQSLPWPADAG 114 Query: 88 -LDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEE 146 + ++ + +LR+ +L + + D + R + R E Sbjct: 115 APSMPRVALDIELQASFGSLRVVTTHLEYYSARQRLAQVDALRDRHREACAHADRPAPAE 174 Query: 147 PLIFAGDYNIIPQPHDCYNPIIWENDACFT----LEVRQSFQKLQNMGFTDAIRATHDTH 202 P+ D+ + + + T Sbjct: 175 TPEGPFSATGQPRDAIVCGDFNSAFDSDAYRRLLEPIADAPGFVDAWIARHPGHTPPPTA 234 Query: 203 HLY-S-FWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 +Y + W + D + ++ + ID R SDH PV++ Sbjct: 235 GIYDTVQWSDGPLA--------CDFVFVTDTLLPRVIGCEIDGDVR----ASDHQPVLLE 282 Query: 261 L 261 L Sbjct: 283 L 283 >gi|326335303|ref|ZP_08201498.1| endonuclease/exonuclease/phosphatase [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325692574|gb|EGD34518.1| endonuclease/exonuclease/phosphatase [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 343 Score = 53.3 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 46/265 (17%), Positives = 91/265 (34%), Gaps = 38/265 (14%) Query: 6 VATWNVNSIR--------ARIHNLAAWIKENNPDIICLQE-TKTEDKNFPFETLQSLNYH 56 + ++NV + + ++++E +P+I+ LQE K E+++FPF Y Sbjct: 104 IMSFNVRLLNHYKWSKDLTLREKIISFLREEHPNIVALQEFYKKENESFPF-------YK 156 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 + K+ N + I+ + + A + TLR+ +L+ Sbjct: 157 YKRFIYKNENDKIGQAILSDYPIIGSGSLNFPHTGNNGVYADIVLGKDTLRLYSLHFESF 216 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 I T+ + S ++ + +F + P P Sbjct: 217 -HIDDTQITQENSKKILLSLPKRFAIQQSQVELFDAHADTSPYPIIVCGDFNNT------ 269 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 +QK+QN G D+ + ++ Y+ RID+I P + Sbjct: 270 -AFSYLYQKIQNRGLIDSFQEEGSGFGKTYYFPYFP--------FRIDYIFADPYF--KI 318 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSL 261 S ++ T SDH P+ + Sbjct: 319 TSHKVYTGI----NYSDHYPLKATF 339 >gi|229028217|ref|ZP_04184357.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1271] gi|228733091|gb|EEL83933.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1271] Length = 263 Score = 53.3 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 33/271 (12%), Positives = 63/271 (23%), Gaps = 19/271 (7%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET--KTEDKNFP----FETLQS 52 + + T N +S + +I LA I+E + D+I LQE + +N + Sbjct: 1 MRLLTLNCHSWQEENQLEKIKYLAKVIQEEDYDVIALQEVSQSIQAENVCGHKKKDNFGL 60 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 L + + ++ + F + Sbjct: 61 LLLEELKALHVKDYNITWDFSHIGYDVYEEGLAILTKHNVIKEDTFFVSENKDTTYWKTR 120 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 I + + + N + Sbjct: 121 KIVSATIAYNGKNITFYSCHLGWWNDEEESFKGQVDRLMERVNRDELSFLMGDFNNNARL 180 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 E + WD +RID I+ + Sbjct: 181 QGEGYEYMMQKGLYDTYELAAEKDEGTTVQGEIAGWD------KNKHNLRIDLILCNQS- 233 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + S+++ SDH V V +DI Sbjct: 234 -EKVRSSKVIFNDTNRNVISDHFGVEVQVDI 263 >gi|225852859|ref|YP_002733092.1| endonuclease/exonuclease/phosphatase [Brucella melitensis ATCC 23457] gi|256263656|ref|ZP_05466188.1| endonuclease/exonuclease/phosphatase [Brucella melitensis bv. 2 str. 63/9] gi|225641224|gb|ACO01138.1| Endonuclease/exonuclease/phosphatase [Brucella melitensis ATCC 23457] gi|263093710|gb|EEZ17715.1| endonuclease/exonuclease/phosphatase [Brucella melitensis bv. 2 str. 63/9] gi|326409399|gb|ADZ66464.1| endonuclease/exonuclease/phosphatase [Brucella melitensis M28] Length = 369 Score = 53.3 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 42/309 (13%), Positives = 78/309 (25%), Gaps = 75/309 (24%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQ--------SLNYHIETCGQKSYNGVAILSKYQP 76 I E DI+CLQE D + Y + + + ++ Sbjct: 65 IAETRADILCLQEV---DNLAALNAFEYGYLFKMIGYGYRHKYLIDGNDSRGIDVAVMMR 121 Query: 77 IEIVTHLPG------------------------------DDLDVQARFIEATFTINTQTL 106 P D + + I + L Sbjct: 122 DTTRDGQPIEVDEVTSHAHLTYSDFGIYQPELAELGLEPHDRIFKRDCLNVDLRIGGEPL 181 Query: 107 RIGNLYLPHGNPI----------TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI 156 + +L + + + + + E + GD+N Sbjct: 182 SLFVAHLKSMSGARNGQDGRASSHPVRLAEARAIRRIIEEKFGIDRVTERRWLICGDFND 241 Query: 157 IPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS 216 + + +E + L GF + ++ + Sbjct: 242 YRERILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDRWTLYHTRGPLER 301 Query: 217 KNKGIRIDHIMLSPEATSLLHSA-------------------RIDTKPR-GWTKP--SDH 254 ++D+IM SP + A +D PR GW +P SDH Sbjct: 302 --HLCQLDYIMASPAFAAKNEHAVPDIIRRGQPWRTIFPPEQNVDRYPRTGWDRPKASDH 359 Query: 255 TPVIVSLDI 263 PV V+L++ Sbjct: 360 CPVSVTLNM 368 >gi|170701595|ref|ZP_02892542.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria IOP40-10] gi|170133507|gb|EDT01888.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria IOP40-10] Length = 269 Score = 53.3 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 43/262 (16%), Positives = 67/262 (25%), Gaps = 47/262 (17%) Query: 4 VTVATWNVNS------IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57 + +AT+N+ RA H +A I E + D+I LQE L Sbjct: 29 LRIATYNIRGGYGKWHTRAA-HRIAQVIHELDADVIALQEV-------------PLGGTH 74 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 + I T V +R + Sbjct: 75 APDVLAHLRDATGMHAVAGPTIDTPERRYGNAVLSRCPIRAARTLDLSFH---------Q 125 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 D I +R + L L A ++ P+I D Sbjct: 126 REPRGALDADIDCSAGMIRVVATHLGLSASERSAQVQRLLAAFDTGAMPVILMGDINEWF 185 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 ++ Q L T T LY + +D I + P L Sbjct: 186 VRGRALQALVTRFRRAPAPRTFPT--LYPVFS-------------LDRIWIHPG--EWLV 228 Query: 238 SARIDTKPRGWTKPSDHTPVIV 259 + R + SDH P++ Sbjct: 229 DVNVHRSMRAR-RASDHYPLVA 249 >gi|229188637|ref|ZP_04315676.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus ATCC 10876] gi|228594826|gb|EEK52606.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus ATCC 10876] Length = 263 Score = 53.3 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 35/271 (12%), Positives = 63/271 (23%), Gaps = 19/271 (7%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET--KTEDKNFP----FETLQS 52 + + T N +S + +I LA I+E D+I LQE + +N + Sbjct: 1 MKLLTLNCHSWQEENQIEKIQYLAKVIQEEEYDVIALQEVSQSIQAENVCGNKKEDNFGL 60 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 L + + ++ + F + Sbjct: 61 LLLEELKALHVKDYNITWDFSHIGYDVYEEGLAIITKHNIIKEDTFFISENEDTTYWKTR 120 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 I D + + + + Sbjct: 121 KIVSATIAYNGKDITFYSCHLGWWNDEEESFEGQVDRLMERVDSNKLAFLMGDFNNNARL 180 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 E + WD +RID I+ + Sbjct: 181 EGEGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWD------ENKHNLRIDLILCNQS- 233 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +HS+++ SDH V V LDI Sbjct: 234 -KKVHSSKVIFNGTNRNVISDHFGVEVQLDI 263 >gi|62290271|ref|YP_222064.1| hypothetical protein BruAb1_1372 [Brucella abortus bv. 1 str. 9-941] gi|82700193|ref|YP_414767.1| endonuclease/exonuclease/phosphatase family protein [Brucella melitensis biovar Abortus 2308] gi|189024505|ref|YP_001935273.1| Endonuclease/exonuclease/phosphatase family [Brucella abortus S19] gi|237815777|ref|ZP_04594774.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A] gi|254689573|ref|ZP_05152827.1| Endonuclease/exonuclease/phosphatase family protein [Brucella abortus bv. 6 str. 870] gi|254697714|ref|ZP_05159542.1| Endonuclease/exonuclease/phosphatase family protein [Brucella abortus bv. 2 str. 86/8/59] gi|254730604|ref|ZP_05189182.1| Endonuclease/exonuclease/phosphatase family protein [Brucella abortus bv. 4 str. 292] gi|256045007|ref|ZP_05447910.1| Endonuclease/exonuclease/phosphatase family protein [Brucella melitensis bv. 1 str. Rev.1] gi|256257822|ref|ZP_05463358.1| Endonuclease/exonuclease/phosphatase family protein [Brucella abortus bv. 9 str. C68] gi|256369791|ref|YP_003107302.1| Endonuclease/exonuclease/phosphatase family protein [Brucella microti CCM 4915] gi|260546815|ref|ZP_05822554.1| endonuclease/exonuclease/phosphatase family protein [Brucella abortus NCTC 8038] gi|260565390|ref|ZP_05835874.1| endonuclease/exonuclease/phosphatase family protein [Brucella melitensis bv. 1 str. 16M] gi|260755101|ref|ZP_05867449.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 6 str. 870] gi|260758320|ref|ZP_05870668.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 4 str. 292] gi|260762146|ref|ZP_05874489.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 2 str. 86/8/59] gi|260884113|ref|ZP_05895727.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 9 str. C68] gi|265991436|ref|ZP_06103993.1| endonuclease/exonuclease/phosphatase [Brucella melitensis bv. 1 str. Rev.1] gi|297248660|ref|ZP_06932378.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 5 str. B3196] gi|62196403|gb|AAX74703.1| hypothetical conserved protein [Brucella abortus bv. 1 str. 9-941] gi|82616294|emb|CAJ11351.1| Endonuclease/exonuclease/phosphatase family [Brucella melitensis biovar Abortus 2308] gi|189020077|gb|ACD72799.1| Endonuclease/exonuclease/phosphatase family [Brucella abortus S19] gi|237789075|gb|EEP63286.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A] gi|255999954|gb|ACU48353.1| Endonuclease/exonuclease/phosphatase family protein [Brucella microti CCM 4915] gi|260095865|gb|EEW79742.1| endonuclease/exonuclease/phosphatase family protein [Brucella abortus NCTC 8038] gi|260151458|gb|EEW86552.1| endonuclease/exonuclease/phosphatase family protein [Brucella melitensis bv. 1 str. 16M] gi|260668638|gb|EEX55578.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 4 str. 292] gi|260672578|gb|EEX59399.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 2 str. 86/8/59] gi|260675209|gb|EEX62030.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 6 str. 870] gi|260873641|gb|EEX80710.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 9 str. C68] gi|263002220|gb|EEZ14795.1| endonuclease/exonuclease/phosphatase [Brucella melitensis bv. 1 str. Rev.1] gi|297175829|gb|EFH35176.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 5 str. B3196] Length = 369 Score = 53.3 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 42/309 (13%), Positives = 78/309 (25%), Gaps = 75/309 (24%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQ--------SLNYHIETCGQKSYNGVAILSKYQP 76 I E DI+CLQE D + Y + + + ++ Sbjct: 65 IAETRADILCLQEV---DNLAALNAFEYGYLFKMIGYGYRHKYLIDGNDSRGIDVAVMMR 121 Query: 77 IEIVTHLPG------------------------------DDLDVQARFIEATFTINTQTL 106 P D + + I + L Sbjct: 122 DTTRDGQPIEVDEVTSHAHLTYSDFGIYQPELAELGLEPHDRIFKRDCLNVDLRIGGEPL 181 Query: 107 RIGNLYLPHGNPI----------TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI 156 + +L + + + + + E + GD+N Sbjct: 182 SLFVAHLKSMSGARNGQDGRTSSHPVRLAEARAIRRIIEEKFGIDRVTERRWLICGDFND 241 Query: 157 IPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS 216 + + +E + L GF + ++ + Sbjct: 242 YRERILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDRWTLYHTRGPLER 301 Query: 217 KNKGIRIDHIMLSPEATSLLHSA-------------------RIDTKPR-GWTKP--SDH 254 ++D+IM SP + A +D PR GW +P SDH Sbjct: 302 --HLCQLDYIMASPAFAAKNEHAVPDIIRRGQPWRTIFPPEQNVDRYPRTGWDRPKASDH 359 Query: 255 TPVIVSLDI 263 PV V+L++ Sbjct: 360 CPVSVTLNM 368 >gi|229108038|ref|ZP_04237664.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock1-15] gi|228675438|gb|EEL30656.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock1-15] Length = 263 Score = 53.3 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 35/271 (12%), Positives = 63/271 (23%), Gaps = 19/271 (7%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET--KTEDKNFP----FETLQS 52 + + T N +S + +I LA I+E D+I LQE + +N + Sbjct: 1 MKLLTLNCHSWQEENQIEKIQYLAKVIQEEEYDVIALQEVSQSIQAENVCGNKKEDNFGL 60 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 L + + ++ + F + Sbjct: 61 LLLEELKALHVKDYNITWDFSHIGYDVYEEGLAIITKHNIIKEDTFFISENEDTTYWKTR 120 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 I D + + + + Sbjct: 121 KIVSATIAYNGKDITFYSCHLGWWNDEEESFKGQVDRLMERVDSNKLAFLMGDFNNNARL 180 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 E + WD +RID I+ + Sbjct: 181 KGEGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWD------ENKHNLRIDLILCNQS- 233 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +HS+++ SDH V V LDI Sbjct: 234 -KKVHSSKVIFNGTNRNVISDHFGVEVQLDI 263 >gi|55379934|ref|YP_137784.1| hypothetical protein rrnAC3397 [Haloarcula marismortui ATCC 43049] gi|55232659|gb|AAV48078.1| unknown [Haloarcula marismortui ATCC 43049] Length = 277 Score = 53.3 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 34/269 (12%), Positives = 66/269 (24%), Gaps = 18/269 (6%) Query: 1 MSVVTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51 M V ++NV + R +A I+ +NPDII +QE + Sbjct: 15 MKPTRVMSFNVRYDTAGDGVDGWPHRRRLVAGTIQYHNPDIIGVQE--AMAHQLRELEVL 72 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 Y ++S + + + + ++ Sbjct: 73 LDGYEWVGDPRESVDAGGEHTAIGYRAERFDCAATNTFWLSEQPAEPSSVGWDAAYPRVA 132 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 + ++ ++ +E L + Sbjct: 133 TWARLRDRDTDDDLLCLNTHLDHQGADARVEGIELVLDHLD--SATRDAPAVVMGDFNCV 190 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 E + + D TH + D + IDH+ +S + Sbjct: 191 VGEPAYERAEGHELPDGRRLVDTRNTATVTHGPTT---SRTDFHDLLPEMGIDHVFVSED 247 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 + D SDH PV+V Sbjct: 248 VAVDTRAVIADRD--DDHYGSDHLPVVVD 274 >gi|256061437|ref|ZP_05451581.1| Endonuclease/exonuclease/phosphatase family protein [Brucella neotomae 5K33] gi|261325444|ref|ZP_05964641.1| endonuclease/exonuclease/phosphatase [Brucella neotomae 5K33] gi|261301424|gb|EEY04921.1| endonuclease/exonuclease/phosphatase [Brucella neotomae 5K33] Length = 369 Score = 53.3 bits (126), Expect = 4e-05, Method: Composition-based stats. Identities = 42/309 (13%), Positives = 78/309 (25%), Gaps = 75/309 (24%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQ--------SLNYHIETCGQKSYNGVAILSKYQP 76 I E DI+CLQE D + Y + + + ++ Sbjct: 65 IAETRADILCLQEV---DNLAALNAFEYGYLFKMIGYGYRHKYLIDGNDSRGIDVAVMMR 121 Query: 77 IEIVTHLPG------------------------------DDLDVQARFIEATFTINTQTL 106 P D + + I + L Sbjct: 122 DTTRDGQPIEVDEVTSHAHLTYSDFGIYQPELAELGLEPHDRIFKRDCLNVDLRIGGEPL 181 Query: 107 RIGNLYLPHGNPI----------TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI 156 + +L + + + + + E + GD+N Sbjct: 182 SLFVAHLKSMSGARNGQDGRTSSHPVRLAEARAIRRIIEEKFGIDRVTERRWLICGDFND 241 Query: 157 IPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS 216 + + +E + L GF + ++ + Sbjct: 242 YRERILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDRWTLYHTRGPLER 301 Query: 217 KNKGIRIDHIMLSPEATSLLHSA-------------------RIDTKPR-GWTKP--SDH 254 ++D+IM SP + A +D PR GW +P SDH Sbjct: 302 --HLCQLDYIMASPAFAAKNEHAVPDIIRRGQPWRTIFPPEQNVDRYPRTGWDRPKVSDH 359 Query: 255 TPVIVSLDI 263 PV V+L++ Sbjct: 360 CPVSVTLNM 368 >gi|294952851|ref|XP_002787481.1| ap endonuclease, putative [Perkinsus marinus ATCC 50983] gi|239902483|gb|EER19277.1| ap endonuclease, putative [Perkinsus marinus ATCC 50983] Length = 563 Score = 52.9 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 33/171 (19%), Positives = 60/171 (35%), Gaps = 14/171 (8%) Query: 7 ATWNVNS-IRARI-----HN-LAAWIKENNPDIICLQETKTEDKNFPFETLQ---SLNYH 56 +WNV IR H +A ++ +++ DI+ +QE+K Q + Y Sbjct: 1 MSWNVAGWIRTAKLIVKYHGSVAKYLMKHDVDILAVQESKVSKARVSSVEAQQAVPMGYE 60 Query: 57 IETCG---QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 + +NGV + + T + + I N+Y+ Sbjct: 61 AYWSHSTSKPGFNGVCTFVREGIPVRDVLNKPFNDSRFDDEGRCLVTFHNDDVAIVNVYV 120 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 P+G + KI ++ + E +I GD N+ P P D + Sbjct: 121 PNGG-EGGKRLPYKIQFLYKLRALCKGLREKGWRVILLGDLNMSPDPRDIW 170 Score = 45.2 bits (105), Expect = 0.011, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 24/65 (36%), Gaps = 1/65 (1%) Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIM 227 W R + G D+ R H + ++ WD Y + N G RID+I+ Sbjct: 313 WGMGRGSEDIKRWLNDMKEVDGMIDSFRLAHPSAEDRFTCWDQYRNRRYANAGSRIDYIL 372 Query: 228 LSPEA 232 + Sbjct: 373 VDNTI 377 >gi|85859313|ref|YP_461515.1| hypothetical protein SYN_02542 [Syntrophus aciditrophicus SB] gi|85722404|gb|ABC77347.1| hypothetical membrane protein [Syntrophus aciditrophicus SB] Length = 346 Score = 52.9 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 46/259 (17%), Positives = 74/259 (28%), Gaps = 18/259 (6%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V TWN+ R + I PD++ Q + L H+ Sbjct: 98 IRVMTWNIKYDRRKAARFIREIDRCKPDVLLFQ-------DAWNSMRGPLGKHMPPDWHV 150 Query: 64 SYNG-VAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 G I S+Y E H + F+ T+ + + + N++ T Sbjct: 151 LTRGQYVIASRYPLSEAEVHELPFSGKRKESFLRCRMTVGSTAISLYNVHFKTPRNSFYT 210 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K L + + + A I P+I D Sbjct: 211 L--SKAKSRPWDLPEFIRSFDNNMKIRIAQAATIREYLIAERGPVILSGDLNAPDASLVC 268 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYAD-SWSKNKGIRIDHIMLSPEATSLLHSARI 241 H Y + W + +RIDHIM + + + + R+ Sbjct: 269 STLRGAGLRDAFAEGGRGYGHTYGHFLLKNRLPWLRFSWMRIDHIMSNAQLKTR--NCRV 326 Query: 242 DTKPRGWTKPSDHTPVIVS 260 G K SDH PVI Sbjct: 327 -----GTGKASDHRPVIAD 340 >gi|254694063|ref|ZP_05155891.1| Endonuclease/exonuclease/phosphatase [Brucella abortus bv. 3 str. Tulya] gi|261214359|ref|ZP_05928640.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 3 str. Tulya] gi|260915966|gb|EEX82827.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 3 str. Tulya] Length = 369 Score = 52.9 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 42/309 (13%), Positives = 78/309 (25%), Gaps = 75/309 (24%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQ--------SLNYHIETCGQKSYNGVAILSKYQP 76 I E DI+CLQE D + Y + + + ++ Sbjct: 65 IAETRADILCLQEV---DNLAALNAFEYGYLFKMIGYGYRHKYLIDGNDSRGIDVAVMMR 121 Query: 77 IEIVTHLPG------------------------------DDLDVQARFIEATFTINTQTL 106 P D + + I + L Sbjct: 122 DTTRDGQPIEVDEVTSHAHLTYSDFGIYQPELAELGLEPHDRIFKRDCLNVDLRIGGEPL 181 Query: 107 RIGNLYLPHGNPI----------TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI 156 + +L + + + + + E + GD+N Sbjct: 182 SLFVAHLKSMSGARNGQDGRPSSHPVRLAEARAIRRIIEEKFGIDRVTERRWLICGDFND 241 Query: 157 IPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS 216 + + +E + L GF + ++ + Sbjct: 242 YRERILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDRWTLYHTRGPLER 301 Query: 217 KNKGIRIDHIMLSPEATSLLHSA-------------------RIDTKPR-GWTKP--SDH 254 ++D+IM SP + A +D PR GW +P SDH Sbjct: 302 --HLCQLDYIMASPAFAAKNEHAVPDIIRRGQPWRTIFPPEQNVDRYPRTGWDRPKASDH 359 Query: 255 TPVIVSLDI 263 PV V+L++ Sbjct: 360 CPVSVTLNM 368 >gi|229056209|ref|ZP_04195634.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH603] gi|228721126|gb|EEL72659.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH603] Length = 263 Score = 52.9 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 34/271 (12%), Positives = 66/271 (24%), Gaps = 19/271 (7%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET--KTEDKNFP----FETLQS 52 + + T N +S + +I LA I+E + D+I LQE + +N + Sbjct: 1 MKLLTLNCHSWQEENQIEKIKYLAKVIQEEDYDVIALQEVSQSIQAENVCGNKKKDNFGL 60 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 L + + ++ + F + Sbjct: 61 LLLEELRALNVKEYNIIWDFSHIGYDVYEEGLAIITKHNIVKEDTFFVSENKDTTYWKTR 120 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 I + + ++ N + Sbjct: 121 KIVSATIAYNDKNITFYSCHLGWWNDEEESFKDQVDRLMERVNSNELSFLMGDFNNNARL 180 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 E + WD + +RID I+ + Sbjct: 181 EGEGYEYTMQKGLYDTYELAIEKDEGTTVQGEIAGWD------ENKQNLRIDLILSNQS- 233 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 ++S+++ SDH V V LDI Sbjct: 234 -KTVNSSKVIFNGTNRNVISDHFGVEVQLDI 263 >gi|218662309|ref|ZP_03518239.1| putative phosphatase protein [Rhizobium etli IE4771] Length = 102 Score = 52.9 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 12/63 (19%) Query: 201 THHLYSFWDYYADSWSKNKGIR--IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVI 258 YS+ D ++ G R +D+ +S S L SARIDT+ G SDH P+ Sbjct: 48 RPESYSWMD------PEDHGKRMHLDYCFVSCGLVSRLKSARIDTQSVG----SDHFPLW 97 Query: 259 VSL 261 V + Sbjct: 98 VEI 100 >gi|256113921|ref|ZP_05454714.1| Endonuclease/exonuclease/phosphatase family protein [Brucella melitensis bv. 3 str. Ether] gi|265995273|ref|ZP_06107830.1| endonuclease/exonuclease/phosphatase [Brucella melitensis bv. 3 str. Ether] gi|262766386|gb|EEZ12175.1| endonuclease/exonuclease/phosphatase [Brucella melitensis bv. 3 str. Ether] Length = 369 Score = 52.9 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 42/309 (13%), Positives = 79/309 (25%), Gaps = 75/309 (24%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQ--------SLNYHIETCGQKSYNGVAILSKYQP 76 I E DI+CLQE D + Y + + + ++ Sbjct: 65 IAETRADILCLQEV---DNLAALNAFEYGYLFKMIGYGYRHKYLIDGNDSRGIDVAVMMR 121 Query: 77 IEIVTHLPG------------------------------DDLDVQARFIEATFTINTQTL 106 P D + + I + L Sbjct: 122 DTTRDGQPIEVDEVTSHAHLTYSDFGIYQPELAELGLEPHDRIFKRDCLNVDLRIGGEPL 181 Query: 107 RIGNLYLPHGNPITSTK----------YDDKISWIKRFLRFASQRLELEEPLIFAGDYNI 156 + +L + + + + + + E + GD+N Sbjct: 182 SLFVAHLKSMSGAHNGQDGRTSSHPVRLAEARAIRRIIEEKFGIDRVTERRWLICGDFND 241 Query: 157 IPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS 216 + + +E + L GF + ++ + Sbjct: 242 YRERILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDRWTLYHTRGPLER 301 Query: 217 KNKGIRIDHIMLSPEATSLLHSA-------------------RIDTKPR-GWTKP--SDH 254 ++D+IM SP + A +D PR GW +P SDH Sbjct: 302 --HLCQLDYIMASPAFAAKNEHAVPDIIRRGQPWRTIFPPEQNVDRYPRTGWDRPKASDH 359 Query: 255 TPVIVSLDI 263 PV V+L++ Sbjct: 360 CPVSVTLNM 368 >gi|71415753|ref|XP_809932.1| apurinic/apyrimidinic endonuclease [Trypanosoma cruzi strain CL Brener] gi|70874389|gb|EAN88081.1| apurinic/apyrimidinic endonuclease, putative [Trypanosoma cruzi] Length = 612 Score = 52.9 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 18/145 (12%), Positives = 41/145 (28%), Gaps = 20/145 (13%) Query: 4 VTVATWNVNS-------IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFET------- 49 + + +WNV IR ++A++++ +I+CLQE K + Sbjct: 1 MFIISWNVAGWSSTSRMIREDFGSIASFLQRTQAEIVCLQEVKGSWAKLEADPCGMGASD 60 Query: 50 ----LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT 105 L + + + +T + + I T Sbjct: 61 GGRTLAIDGWESFWSFSGKAHRGFNGVVSFVRKDLTWWCDSRPFSEEDLNDEGRVIVTCH 120 Query: 106 --LRIGNLYLPHGNPITSTKYDDKI 128 + N Y+ + + + Sbjct: 121 SAFVVVNTYVVNARHGQRMAFKMRF 145 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 10/37 (27%), Positives = 17/37 (45%) Query: 204 LYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 Y+ WD + +N+G RID+I++ L Sbjct: 393 PYTCWDQSRNRRQRNEGTRIDYILIDEMLLPALIPCG 429 >gi|225428456|ref|XP_002280534.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1473 Score = 52.9 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 27/244 (11%), Positives = 67/244 (27%), Gaps = 28/244 (11%) Query: 16 ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75 ++ + A I+ D+ CLQETK + GV Sbjct: 560 SKRKVIKAMIRSQRVDLFCLQETKIQP---------------------MAEGVVRSLGTG 598 Query: 76 PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135 L T+ + +G + + + + Sbjct: 599 RFLEWGALDAHGSAGGVLICWDKRTLEMIEMEVGQFSISCRLRNVEDGFVWTFTGVYGPF 658 Query: 136 RFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAI 195 + EE G ++ +N ++ + + + + ++ + + Sbjct: 659 SRVDREAFWEELGAIRGIWSDPWCIGGDFNVVLSQRERSSQGRISGAMRRFAQVVDDLEL 718 Query: 196 RATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHT 255 ++S+ + + R+D +++ I + R SDH Sbjct: 719 LDLPLQGGVFSW----SGGRNNQAWARLDRFLVTQCWPDNF--CGIV-QCRLPRPTSDHF 771 Query: 256 PVIV 259 P+++ Sbjct: 772 PIML 775 >gi|322390094|ref|ZP_08063629.1| RgfB protein [Streptococcus parasanguinis ATCC 903] gi|321143221|gb|EFX38664.1| RgfB protein [Streptococcus parasanguinis ATCC 903] Length = 270 Score = 52.9 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 35/275 (12%), Positives = 75/275 (27%), Gaps = 20/275 (7%) Query: 4 VTVATWNVNSI---RARIH--NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 + T N +S A+ L I E D+IC QE ++ E +++ Y+ Sbjct: 1 MKFLTLNSHSWMEENAQQKFETLKEQILEAQYDVICFQEV---NQEMASEVVKTDEYYQA 57 Query: 59 ----------TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108 + +A + + G D + + + + + + Sbjct: 58 LPSAVAIHKDHFVRVLVEELAAQGLHYYWTWAYNHIGYDHLNEGVAVLSRQPLKADEILV 117 Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168 N+ P K + ++ F I+ Sbjct: 118 SNMDDPTDYHTRRVAVAHTSVDGKEIAVASVHLSWWDKGFQFEWPRIEKYFSQVGKPFIL 177 Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 + + ++ D+ +T Y+ +RID++ Sbjct: 178 AGDFNNPAGQEGYETILSSSLKLQDSFIEAKETKGTYTVGPGIDGWTDNQVPLRIDYVFA 237 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 SPE + + + SDH + L + Sbjct: 238 SPEWD--IQRLHVIFDDQNKPHVSDHYGLEAELSL 270 >gi|311745839|ref|ZP_07719624.1| endonuclease/exonuclease/phosphatase family protein [Algoriphagus sp. PR1] gi|311302431|gb|EAZ80320.2| endonuclease/exonuclease/phosphatase family protein [Algoriphagus sp. PR1] Length = 286 Score = 52.9 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 34/247 (13%), Positives = 65/247 (26%), Gaps = 16/247 (6%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQP 76 R+ ++ I+ + +I+ +QE SL Y G+ + Sbjct: 53 RLPEVSKLIQFHQIEIVGIQE--GLHDQV-VGLSNSLGYSFIGVGRDDGTEKGEYAAILY 109 Query: 77 IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 + L + E L + + T + I Sbjct: 110 NQDNFKLLDSGTFWLSPTPEKPSKGWDAALNRICTWGKFQDREGVTFFIFNI-----HYD 164 Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL-QNMGFTDAI 195 Q+ E + + + N + Sbjct: 165 HIGQQAREESSKLVMNQVAKLNPEGAPAIMMGDFNVTPDNPAYTTITSNPAWKDSRLISK 224 Query: 196 RATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHT 255 ++ ++ +D+ GI IDH+ + + I + G PSDH Sbjct: 225 IPSYGPKGTFTGFDWERMP----DGI-IDHVFVYGPIE--VIRHGILSDNYGKKYPSDHF 277 Query: 256 PVIVSLD 262 PV+V LD Sbjct: 278 PVLVELD 284 >gi|326539108|gb|ADZ87323.1| endonuclease/exonuclease/phosphatase [Brucella melitensis M5-90] Length = 357 Score = 52.9 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 42/309 (13%), Positives = 78/309 (25%), Gaps = 75/309 (24%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQ--------SLNYHIETCGQKSYNGVAILSKYQP 76 I E DI+CLQE D + Y + + + ++ Sbjct: 53 IAETRADILCLQEV---DNLAALNAFEYGYLFKMIGYGYRHKYLIDGNDSRGIDVAVMMR 109 Query: 77 IEIVTHLPG------------------------------DDLDVQARFIEATFTINTQTL 106 P D + + I + L Sbjct: 110 DTTRDGQPIEVDEVTSHAHLTYSDFGIYQPELAELGLEPHDRIFKRDCLNVDLRIGGEPL 169 Query: 107 RIGNLYLPHGNPI----------TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI 156 + +L + + + + + E + GD+N Sbjct: 170 SLFVAHLKSMSGARNGQDGRASSHPVRLAEARAIRRIIEEKFGIDRVTERRWLICGDFND 229 Query: 157 IPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS 216 + + +E + L GF + ++ + Sbjct: 230 YRERILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDRWTLYHTRGPLER 289 Query: 217 KNKGIRIDHIMLSPEATSLLHSA-------------------RIDTKPR-GWTKP--SDH 254 ++D+IM SP + A +D PR GW +P SDH Sbjct: 290 --HLCQLDYIMASPAFAAKNEHAVPDIIRRGQPWRTIFPPEQNVDRYPRTGWDRPKASDH 347 Query: 255 TPVIVSLDI 263 PV V+L++ Sbjct: 348 CPVSVTLNM 356 >gi|300691813|ref|YP_003752808.1| hypothetical protein RPSI07_2169 [Ralstonia solanacearum PSI07] gi|299078873|emb|CBJ51534.1| conserved protein of unknown function, endonuclease/exonuclease/phosphatase family [Ralstonia solanacearum PSI07] Length = 289 Score = 52.9 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 43/299 (14%), Positives = 85/299 (28%), Gaps = 52/299 (17%) Query: 1 MSVVTVATWN------VNSIRARIHNLAAWIKENNP-DIICLQETKTEDKNFP------- 46 M + + TWN V+ R + + A + P D++CLQE + N P Sbjct: 1 MGTI-ILTWNIQWGRGVDG-RVDLPRMLAEARAMGPFDVLCLQEVTSGFGNLPGQPGDDQ 58 Query: 47 -FETLQSLNYHI----------ETCGQKSYNGVAILSKYQPIEIVTHLPGDD----LDVQ 91 E ++L + G AI ++ + + H + Sbjct: 59 WHELARALGQEFTLIDGIALERHEGARIQRFGNAIATRLPVLHVARHALPCPVDTSPTMP 118 Query: 92 ARFIEATFTINTQTLRIGNLYLPHGNPITSTKYD---DKISWIKRFLRFASQRLELEEPL 148 IEAT LR+ + +L + + + L E Sbjct: 119 RMAIEATVQAPFGPLRVVSTHLEYYSETQRIAQIDVLRALHVAGCMRTAHPPTLGPEPAD 178 Query: 149 IFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG-FTDAIRATHDTHHLY-- 205 C + N L + + + + Sbjct: 179 GPFRPLAQTHASVICGDFNCKRNSTPKRLATVPFSHETVALYDAWEIAHGPAPQPPTFGV 238 Query: 206 ---SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + W A + D +++S + + +++ T+ SDH P+++ L Sbjct: 239 HDRTGWTEPAYA--------CDFMLVSEPLKTRVARVEVNSA----TQASDHQPMLLEL 285 >gi|147835100|emb|CAN61375.1| hypothetical protein VITISV_037805 [Vitis vinifera] Length = 1765 Score = 52.9 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 36/262 (13%), Positives = 71/262 (27%), Gaps = 41/262 (15%) Query: 6 VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +WNV + +R + +++ NPD + +QETK + Sbjct: 762 IISWNVRGLGSRNKRRMVKDFLRSENPDXVMIQETK---------------------KEN 800 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 + LP I + + + + IG+ + + Sbjct: 801 CDRRFVGSVXTXRNKDWVALPXSGASXGILIIWDSKNLRREEVVIGSFSVSVKFSLDGCG 860 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + ++ +E I+ Y P + + + + Sbjct: 861 PLWISTVYGPNSPSLTKDFWVELFDIYGLTY---PLWCVGGDFNVIRRSSEKMGGSSLTP 917 Query: 184 QKLQNMGFTDAIRATHDTHHLYSF-WDYYADSWSKNKGIRIDHIMLSPEAT----SLLHS 238 F SF W +S R+D + S E L Sbjct: 918 SMRDFDSFIRECELLDPPLRNASFTWSNMQESPVCK---RLDRFLYSNEWGLLFPQGLQE 974 Query: 239 ARIDTKPRGWTKPSDHTPVIVS 260 A I + SDH P+++ Sbjct: 975 ALI-------RRTSDHWPIVMD 989 >gi|67526939|ref|XP_661531.1| hypothetical protein AN3927.2 [Aspergillus nidulans FGSC A4] gi|40740046|gb|EAA59236.1| hypothetical protein AN3927.2 [Aspergillus nidulans FGSC A4] gi|259481499|tpe|CBF75076.1| TPA: inositol phosphosphingolipid phospholipase C (Eurofung) [Aspergillus nidulans FGSC A4] Length = 451 Score = 52.9 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 51/329 (15%), Positives = 92/329 (27%), Gaps = 61/329 (18%) Query: 4 VTVATWNVNSIR-------ARIHNLAAWIKENNP--DIICLQETKTED--KNFPFETLQS 52 + + T N ++ R+ + + NP DII LQE T+ ++ + Sbjct: 7 IRILTLNCWGLKYLAKYRHERLSEIGRQLALANPPPDIIGLQECWTQQDYESIRTQIAHI 66 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ-------- 104 L Y G G+AI SK+ + H + A F F Sbjct: 67 LPYGKFYFGGIWGAGLAIFSKWPIEQTSMHAYPLNGRPTAFFRGDWFVGKGVACARIRYG 126 Query: 105 -------TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII 157 + +L+ P+ + + + + E +I GD+N++ Sbjct: 127 QGKHDVAEVFCTHLHAPYEQEPHDSYLAHRTAQAWEIAKLMRGAAERGHLVIGLGDFNML 186 Query: 158 PQPHDCYNPIIWENDACFTLEVR-------------QSFQKLQNMGFTDAIRATHDTHHL 204 P + Q+ K + Sbjct: 187 PSSFAHRLICAHSPVVDAWQVIYPDSSVGAAKDAVEQARGKPVPSAEFNLHHNGATCDGP 246 Query: 205 Y-SF-WDYYADSW---------------SKNKGIRIDHIMLSPEATSLLHSARI---DTK 244 Y ++ W KG R+D+I + E + I Sbjct: 247 YNTWRWSKKDQKRLDKGHDIAVEAFKDSPDYKGKRLDYIFVGGEVGWSVRDVNIAMTQRH 306 Query: 245 PRGWTKPSDHTPV--IVSLDIPEPRKKQQ 271 P SDH V +++ D+ KQ+ Sbjct: 307 PTLKCSLSDHFAVQTVITRDVSSMAAKQE 335 >gi|290962564|ref|YP_003493746.1| endonuclease/exonuclease/phosphatase family protein [Streptomyces scabiei 87.22] gi|260652090|emb|CBG75222.1| putative endonuclease/exonuclease/phosphatase family protein [Streptomyces scabiei 87.22] Length = 295 Score = 52.9 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 42/277 (15%), Positives = 82/277 (29%), Gaps = 37/277 (13%) Query: 4 VTVATWNVNSIR------------ARIHNLAAWIKENNPDIICLQE-----TKTEDKNFP 46 + V T+NV R R + ++ P +I QE + +K+ Sbjct: 38 LNVMTFNV---RFATVVDKTPRWTVRRPVMRELLRRERPHVIGTQEGLYQQLRMIEKDL- 93 Query: 47 FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 +Y G+ + ++ + + + D + Sbjct: 94 -----GGHYDWIGTGRGGGSKDEFMAIFYDTRRLDPIEFDHYWLSDTPYTIASNTWGADW 148 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 ++ + + ++ + ++ + + Sbjct: 149 LRMVTWVKFADLADGGREFYVLNTHLDSVSQYARERSAKLVGETIAGW----DRSAPVVV 204 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226 N A V + + DA + + ++ Y A K G RID I Sbjct: 205 TGDFNAAAHDNRVYELMLGNGLVDAWDAAASRSPAYG--TYHGYRAL---KPDGRRIDWI 259 Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + SP T+ H A ++T PSDH PV VSL + Sbjct: 260 LTSPGVTT--HWAAMNTFSVDGLYPSDHLPVQVSLTL 294 >gi|21232876|ref|NP_638793.1| hypothetical protein XCC3447 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66767053|ref|YP_241815.1| hypothetical protein XC_0717 [Xanthomonas campestris pv. campestris str. 8004] gi|21114707|gb|AAM42717.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66572385|gb|AAY47795.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. 8004] Length = 288 Score = 52.9 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 34/271 (12%), Positives = 70/271 (25%), Gaps = 28/271 (10%) Query: 4 VTVATWNV------NS---IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 + V ++NV + +AR + + IK+ +PD+ QE +E + L + Sbjct: 35 LRVMSFNVRVPVDTDGDKRWQARRGAMVSVIKQTHPDVFGTQELVSEQAGYLAAQLPNYR 94 Query: 55 YHIETCGQKSYNGVA-ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 + + + + + + +V D T+ + L+ Sbjct: 95 WFGQGRRGDDSDEHMGVFYDTRTLNVVESGNFWLSDTPEVAGSITWGNVLPRMVTWALFE 154 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + ++ + + +P + +D Sbjct: 155 RRSDKRRFYLFNTHFPYRDEDEPAREHSAR-----LILSRIAQLPADIPVVLTGDFNSDP 209 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 + +T +S RID I+ T Sbjct: 210 DKITYPTLTAVLGDARARAPKRSGPENTFQDFSTHPTR----------RIDWILF-RGLT 258 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 G PSDH PV+ P Sbjct: 259 P--TQFTTLDDRPGGVLPSDHYPVLAEFAWP 287 >gi|224134090|ref|XP_002327753.1| predicted protein [Populus trichocarpa] gi|222836838|gb|EEE75231.1| predicted protein [Populus trichocarpa] Length = 366 Score = 52.9 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 20/102 (19%), Positives = 30/102 (29%), Gaps = 29/102 (28%) Query: 207 FWDYYADSWSKNKGIRIDHIML-------------SPEATSLLHSARIDTKPRGWT---- 249 W + N G RIDHI+ + + + I T+ + W Sbjct: 94 CWSLSTGAEQFNFGSRIDHILCAGPCLHQEHDLQGNNSLSCHVKECDILTEYKRWKLGDT 153 Query: 250 -----------KPSDHTPVIVSL-DIPEPRKKQQDSTSQNMK 279 + SDH PV SL +I + S Sbjct: 154 SRWKGGWGIRLEGSDHAPVYTSLEEIHDIPTHSTLPLSSRYL 195 >gi|196230561|ref|ZP_03129423.1| Endonuclease/exonuclease/phosphatase [Chthoniobacter flavus Ellin428] gi|196225491|gb|EDY19999.1| Endonuclease/exonuclease/phosphatase [Chthoniobacter flavus Ellin428] Length = 303 Score = 52.9 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 51/292 (17%), Positives = 82/292 (28%), Gaps = 47/292 (16%) Query: 6 VATWNV-NSI------------RARIH------NLAAWIKENNPDIICLQETKTEDKNFP 46 +AT+NV N + +A++ + +K+ NPDI+ + E E + F Sbjct: 30 IATYNVENYLGEESVAADTGPRKAKLKSEKEIDAVVRVVKDINPDILGICEM-GEPERFE 88 Query: 47 --FETLQSLNYH---IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI 101 + L H E L PI L ++ + + Sbjct: 89 DFKKRLADAGLHYTDFEYVQALDNQRHLALVSRYPIVARQSLSNVSYELAGQPEKVRRGF 148 Query: 102 NTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161 T+ I Y R + L I D N+ Sbjct: 149 LDVTIEIRPGYQVRFVSAHLKSKLPVPEGEALVRRNEASLLRKHLDEILVADPNVRLVCF 208 Query: 162 DCYNPIIW---ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN 218 +N + ++ D LYS Sbjct: 209 GDFNDLKNEPAYHEVAGVHGPTYMTALPAKDELGDTWTEYWKAADLYS------------ 256 Query: 219 KGIRIDHIMLSPEATSLLH--SARIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268 RID+I +SP + S R+ W SDH PV ++ +P RK Sbjct: 257 ---RIDYIFVSPVLHREISPGSPRVYRSA-YWNDASDHRPVYATI-VPSGRK 303 >gi|326318344|ref|YP_004236016.1| endonuclease/exonuclease/phosphatase [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375180|gb|ADX47449.1| Endonuclease/exonuclease/phosphatase [Acidovorax avenae subsp. avenae ATCC 19860] Length = 252 Score = 52.9 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 40/282 (14%), Positives = 81/282 (28%), Gaps = 62/282 (21%) Query: 3 VVTVATWNVN----SI----RARIHNLAAWIKENNPDIICLQET-KTE---DKNFPF--- 47 ++ +AT+N++ + R IHNL +++ + DI+CLQE K ++FP Sbjct: 12 ILRIATYNIHKGVQGLGPARRLEIHNLGHAVEQLDADIVCLQEVRKVHRRGAQHFPRWPE 71 Query: 48 ----ETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 E L Y + + G + + + Sbjct: 72 LPQAEFLAPEGYEAVYRTNAF---TRHGEHGNALLTRWPVIGHQHEDMSDHRFEQRGLLH 128 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 + + + ++ + + RF ++ + PL+ AGD+N Sbjct: 129 VEVEVQGRRVHAIVVHLGLIPGSRVRQVAQLQRFVAREVPDGAPLLVAGDFND------- 181 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223 ++ + A + Sbjct: 182 ------WGQQVKHALAAFGLREYEGEPRALTYPARLPLVQ-------------------L 216 Query: 224 DHIMLS--PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 DH+ + + RI W + SDH P+I + Sbjct: 217 DHVYVRGMEPMGLHVPRGRI------WWRMSDHLPLIAEFRL 252 >gi|147788232|emb|CAN71594.1| hypothetical protein VITISV_005028 [Vitis vinifera] Length = 363 Score = 52.9 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 26/246 (10%), Positives = 66/246 (26%), Gaps = 30/246 (12%) Query: 16 ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75 ++ + +I+ D++C+QETK ++ G+ Sbjct: 31 SKRKIIKNYIRNQRVDLMCIQETKIQE---------------------MSEGIVRSLGSG 69 Query: 76 PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135 L + + G L + + Sbjct: 70 RFLDWRALNAEGAAGGILICWDKRVLEILDWEEGQFSLSCRFKTIENGATWVFTGVYDPF 129 Query: 136 RFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAI 195 + EE G ++ +N +++++ + + ++ + Sbjct: 130 TKVEREGMWEELGAIRGLWDDPWCLGGDFNITLFQHERSSQRRISSAMRRFAESVDDLEL 189 Query: 196 RATHDTHHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDH 254 +++ N+ R+D ++SP T+ R SDH Sbjct: 190 VDLPLQGGEFTW-----SGGLNNQAWARLDRFLVSPSWLDQFSGV---TQGRLSRPTSDH 241 Query: 255 TPVIVS 260 P+++ Sbjct: 242 FPIVLE 247 >gi|228906140|ref|ZP_04070029.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis IBL 200] gi|228853549|gb|EEM98317.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis IBL 200] Length = 263 Score = 52.9 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 35/271 (12%), Positives = 64/271 (23%), Gaps = 19/271 (7%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET--KTEDKNFP----FETLQS 52 + + T N +S + +I LA I+E D+I LQE + +N + Sbjct: 1 MKLLTLNCHSWQEENQIEKIQYLAKVIQEEEYDVIALQEVSQSIQAENVCGNKKEDNFGL 60 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 L + + ++ + F + Sbjct: 61 LLLEELKALHVKDYNITWDFSHIGYDVYEEGLAIITKHNIIKEDTFFISENEDTTYWKTR 120 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 I D + + + + Sbjct: 121 KIVSTTIAYNGKDITFYSCHLGWWNDEEESFKGQVDRLMERVDSNKLAFLMGDFNNNARL 180 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 E + + WD +RID I+ + Sbjct: 181 EGEGYEYMMQKGLYDTYELAIEKDEGTTVQGVIAGWD------ENKHNLRIDLILCNQS- 233 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +HS+++ SDH V V LDI Sbjct: 234 -KKVHSSKVVFNGTNRNVISDHFGVEVQLDI 263 >gi|225012745|ref|ZP_03703180.1| Endonuclease/exonuclease/phosphatase [Flavobacteria bacterium MS024-2A] gi|225003278|gb|EEG41253.1| Endonuclease/exonuclease/phosphatase [Flavobacteria bacterium MS024-2A] Length = 335 Score = 52.9 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 39/269 (14%), Positives = 75/269 (27%), Gaps = 42/269 (15%) Query: 4 VTVATWNVNSIR-----------ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52 ++V ++NV S A I I + PDI+C QE +++ + Sbjct: 95 ISVMSYNVRSFNRFNWIDSKNIPAEIEGF---INKEQPDIVCFQEY-AQNE---APDFEK 147 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 Y I +G ++ + + + F TLR+ N++ Sbjct: 148 YPYKIFKPYVG--SGQIGSCIISKFPLLNSKSISFKESKNGGMYTDFLWKKDTLRLYNVH 205 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 + K + + + D + + + + N Sbjct: 206 FESLRIDSKDTLIAAEYSQKFRRKINEVFKIQNQQVAQFNDIKNLNEYPEIICTDLNNN- 264 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 + G D+ + Y + +RID IM SP+ Sbjct: 265 ------AFSKSYLNLSRGRKDSFLEKGEGFGA----TYNFLKFP----LRIDFIMSSPKI 310 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 I + SDH P+ + Sbjct: 311 -------NILSYKTHKVNLSDHKPISIIF 332 >gi|145545333|ref|XP_001458351.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124426170|emb|CAK90954.1| unnamed protein product [Paramecium tetraurelia] Length = 326 Score = 52.9 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 40/267 (14%), Positives = 85/267 (31%), Gaps = 28/267 (10%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAI------ 70 R + +K N DI+CLQE ++ F + +++L Y I C + + + Sbjct: 64 RSTKIIDQLKNFNADILCLQEV--DNIEFYQDNIKNLQYDICYCQRPQRSDGCLIAFKIE 121 Query: 71 ---------LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 S Q + + + + IGN++ Sbjct: 122 KFKILISQEYSLDQLALDYGLPLQYLRQNVFQIVRLEHLLTKKQFIIGNIHTFWNPNQDD 181 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 K+ + + +Q+ ++ LIF GD+N +P+ + Sbjct: 182 LKFFQIVQLV---QFMEAQKESEDQILIFCGDFNSLPKSNPIQYIQKNNPIVERIEMSTN 238 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS--- 238 + ++ + Y + + + ++ N ID+I + S Sbjct: 239 QIKLQNDIFQHYGPPKLNW-ESAYHPFPTFTN-YTNNFKGCIDYIYYHNAKVEKILSIPN 296 Query: 239 -ARIDTKP--RGWTKPSDHTPVIVSLD 262 + + + PSDH P++ D Sbjct: 297 QSLLQKEVALPNSNFPSDHVPILAYFD 323 >gi|50289871|ref|XP_447367.1| hypothetical protein [Candida glabrata CBS 138] gi|49526677|emb|CAG60304.1| unnamed protein product [Candida glabrata] Length = 493 Score = 52.9 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 39/194 (20%), Positives = 66/194 (34%), Gaps = 5/194 (2%) Query: 15 RARIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYHIETCGQKSYN-GVAILS 72 R+R+ L K +PD++CLQE + ++F E Q L Y + + S N GV I+ Sbjct: 122 RSRV--LLNEFKHYDPDVLCLQEIDYIQYQSFWKEEFQKLGYSSQFHRKPSKNHGVCIIW 179 Query: 73 KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKI-SWI 131 K++ E+ + D ++ IE T N L + + + DDK + Sbjct: 180 KHEKFEMSDRMLIDFDSEKSGDIEPRTTTNNAALILALKFTQKVKMMGKKLLDDKSGILV 239 Query: 132 KRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191 F E N + + N + ND + + F Sbjct: 240 GTTHLFWHPFGTYERTRQCYVVLNKMKEFMHRVNVLQNNNDGDMSHWYPFFCGDFNSQPF 299 Query: 192 TDAIRATHDTHHLY 205 + Y Sbjct: 300 DSPYLSMTCKPIKY 313 >gi|17986911|ref|NP_539545.1| hypothetical protein BMEI0628 [Brucella melitensis bv. 1 str. 16M] gi|17982554|gb|AAL51809.1| hypothetical protein BMEI0628 [Brucella melitensis bv. 1 str. 16M] Length = 337 Score = 52.9 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 42/309 (13%), Positives = 78/309 (25%), Gaps = 75/309 (24%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQ--------SLNYHIETCGQKSYNGVAILSKYQP 76 I E DI+CLQE D + Y + + + ++ Sbjct: 33 IAETRADILCLQEV---DNLAALNAFEYGYLFKMIGYGYRHKYLIDGNDSRGIDVAVMMR 89 Query: 77 IEIVTHLPG------------------------------DDLDVQARFIEATFTINTQTL 106 P D + + I + L Sbjct: 90 DTTRDGQPIEVDEVTSHAHLTYSDFGIYQPELAELGLEPHDRIFKRDCLNVDLRIGGEPL 149 Query: 107 RIGNLYLPHGNPI----------TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI 156 + +L + + + + + E + GD+N Sbjct: 150 SLFVAHLKSMSGARNGQDGRTSSHPVRLAEARAIRRIIEEKFGIDRVTERRWLICGDFND 209 Query: 157 IPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS 216 + + +E + L GF + ++ + Sbjct: 210 YRERILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDRWTLYHTRGPLER 269 Query: 217 KNKGIRIDHIMLSPEATSLLHSA-------------------RIDTKPR-GWTKP--SDH 254 ++D+IM SP + A +D PR GW +P SDH Sbjct: 270 --HLCQLDYIMASPAFAAKNEHAVPDIIRRGQPWRTIFPPEQNVDRYPRTGWDRPKASDH 327 Query: 255 TPVIVSLDI 263 PV V+L++ Sbjct: 328 CPVSVTLNM 336 >gi|261821654|ref|YP_003259760.1| endonuclease/exonuclease/phosphatase [Pectobacterium wasabiae WPP163] gi|261605667|gb|ACX88153.1| Endonuclease/exonuclease/phosphatase [Pectobacterium wasabiae WPP163] Length = 300 Score = 52.9 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 39/280 (13%), Positives = 82/280 (29%), Gaps = 48/280 (17%) Query: 4 VTVATWNVNS-IRAR---IHNLAAWIKENNPDIICLQET--KTED----KNFPF-----E 48 + +A +N+ +R ++ +A I +PDII L+E KT + Sbjct: 46 LKIANYNIAGGLRNHKVDLNKVAKAINALDPDIIALEEVDQKTTRSDGIDQIKELAKLTK 105 Query: 49 TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108 S I+ G N + + ++ GD + + I Sbjct: 106 MYFSYGVAIQAHGGNYGNAILSKYPIEKTKVFKLPSGDYEQRSLMLSKINIPGFDSPVYI 165 Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168 N + + + + + F L+ + P + G + Sbjct: 166 YNTHF---DWHEEDEVRMSQARFINSIVFDDLDLDKDFPNLATGIF-------ILAGDFN 215 Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 + E+ + + ++ G ++ + N G+ +DHI Sbjct: 216 STKNDRVVKELNKYWNLVEVAGKDTR-----------TWP-------AGNPGLDLDHIFT 257 Query: 229 SPEATSLLHSARIDTKPR-----GWTKPSDHTPVIVSLDI 263 + I W SDH P++ +L + Sbjct: 258 GKGQKWKIEKLTIPNDGSEEFGIKWQTTSDHIPIMATLKL 297 >gi|227543867|ref|ZP_03973916.1| conserved hypothetical protein [Lactobacillus reuteri CF48-3A] gi|227186128|gb|EEI66199.1| conserved hypothetical protein [Lactobacillus reuteri CF48-3A] Length = 50 Score = 52.9 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 22/47 (46%), Gaps = 1/47 (2%) Query: 4 VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFET 49 + +W+VN +++ I H K + D CLQ T+ + P + Sbjct: 1 MKFISWSVNGLKSAINHGFVEDFKRQDADFFCLQCTRLDKGEEPIQI 47 >gi|327262432|ref|XP_003216028.1| PREDICTED: protein angel homolog 2-like [Anolis carolinensis] Length = 562 Score = 52.9 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 20/115 (17%), Positives = 39/115 (33%), Gaps = 10/115 (8%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQ 62 + TWN R N+ A IK+ N D++CLQE ++ + + L++L YH E + Sbjct: 210 LLTWN-----YRFPNILAEIKKLNADVLCLQEV--QEDQYGTQIKPSLEALGYHCEYKMR 262 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 + ++ + + L + + Sbjct: 263 TGRKPDGCATCFKTSKFSLVSSSPVEFFRRNIPLLDRDNVGLVLLLQPRFYCKTG 317 >gi|307311330|ref|ZP_07590973.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium meliloti BL225C] gi|307318863|ref|ZP_07598295.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium meliloti AK83] gi|306895584|gb|EFN26338.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium meliloti AK83] gi|306899631|gb|EFN30259.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium meliloti BL225C] Length = 368 Score = 52.9 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 46/309 (14%), Positives = 90/309 (29%), Gaps = 76/309 (24%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQ--------SLNYHIETCGQKSYNGVAILSKYQP 76 I + + DI+CLQE D + + Y + + + + ++ Sbjct: 66 IADCDADILCLQE---ADNMAALQAFEYGYLFRMAGNGYRQKYLVEGNDSRGIDVAVLMR 122 Query: 77 IEIVTHLPGDDL-----------------------------DVQARFIEATFTINTQTLR 107 E + L + +E I + L Sbjct: 123 EETRDGQKIECLEVKSHAALTYEDLDLFNDELALTNRPRDRIFKRDCLEVDVRIGGRPLT 182 Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPL----------IFAGDYNII 157 + ++L P + + R + R +E GD N Sbjct: 183 LYVVHLKSMGPAREGLDGRQATMAVRIAEVKAVRHIIERRFGRGHTADKVFAICGDMNDY 242 Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK 217 + + E + L + GF + ++ + + Sbjct: 243 QEKVKVLGDRRNGYEFLPHEETTSALDVLSHDGFVENPNLRRPVLDRWTLFHSRG---PE 299 Query: 218 NKGI-RIDHIMLSPEATSL-------LHSA------------RIDTKPR-GWTKP--SDH 254 ++ + ++D+I LSPE + A ++ PR GW +P SDH Sbjct: 300 DRHLCQLDYIWLSPELARRNAARLPEIIRAGQPYRTIFPAGQEVERYPRTGWDRPKASDH 359 Query: 255 TPVIVSLDI 263 PV+++LDI Sbjct: 360 CPVVMTLDI 368 >gi|254702100|ref|ZP_05163928.1| Endonuclease/exonuclease/phosphatase family protein [Brucella suis bv. 5 str. 513] gi|261752670|ref|ZP_05996379.1| endonuclease/exonuclease/phosphatase [Brucella suis bv. 5 str. 513] gi|261742423|gb|EEY30349.1| endonuclease/exonuclease/phosphatase [Brucella suis bv. 5 str. 513] Length = 369 Score = 52.9 bits (125), Expect = 5e-05, Method: Composition-based stats. Identities = 43/309 (13%), Positives = 79/309 (25%), Gaps = 75/309 (24%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQ--------SLNYHIETCGQKSYNGVAILSKYQP 76 I EN DI+CLQE D + Y + + + ++ Sbjct: 65 IAENRADILCLQEV---DNLAALNAFEYGYLFKMIGYGYRHKYLIDGNDSRGIDVAVMMR 121 Query: 77 IEIVTHLPG------------------------------DDLDVQARFIEATFTINTQTL 106 P D + + I + L Sbjct: 122 DTTRDGQPIEVDEVTSHAHLTYSDFGIYQPELAELGLEPHDRIFKRDCLNVDLRIGGEPL 181 Query: 107 RIGNLYLPHGNPI----------TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI 156 + +L + + + + + E + GD+N Sbjct: 182 SLFVAHLKSMSGARNGQDGRTSSHPVRLAEARAIRRIIEEKFGIDRVTERRWLICGDFND 241 Query: 157 IPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS 216 + + +E + L GF + ++ + Sbjct: 242 YRERILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDRWTLYHTRGPLER 301 Query: 217 KNKGIRIDHIMLSPEATSLLHSA-------------------RIDTKPR-GWTKP--SDH 254 ++D+IM SP + A +D PR GW +P SDH Sbjct: 302 --HLCQLDYIMASPAFAAKNEHAVPDIIRRGQPWRTIFPPEQNVDRYPRTGWDRPKASDH 359 Query: 255 TPVIVSLDI 263 PV V+L++ Sbjct: 360 CPVSVTLNM 368 >gi|238061691|ref|ZP_04606400.1| hypothetical protein MCAG_02657 [Micromonospora sp. ATCC 39149] gi|237883502|gb|EEP72330.1| hypothetical protein MCAG_02657 [Micromonospora sp. ATCC 39149] Length = 457 Score = 52.9 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 42/269 (15%), Positives = 72/269 (26%), Gaps = 22/269 (8%) Query: 6 VATWNV--------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57 V T+N+ NS R + + PD+I QE Q L Sbjct: 59 VMTFNLRYASSSRPNSWAQRRPAMRELLTAEQPDLIGTQE--GLAGQL-ANIKQDLGSRY 115 Query: 58 ETCGQKSYNGVAI-LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 E G G + E + I + Sbjct: 116 ELIGVGREGGTRGEYMAIFYDNTRLQPLEQHHFWLSDTPEVVGSNTWGGGSIRMVTWVRF 175 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + + ++ ++ + A + P + Sbjct: 176 RDVVTGGQLYAVNTHLDNASALARERAAQLIR--ARLAALAPGLPIVLTGDFNSGPWAGS 233 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 ++ + A AT + ++ +Y G RID I+ + T + Sbjct: 234 PVYDVLVRQAGLVDTWTAAAATGPAYG--TYHNYQPLVAG---GARIDWILATRGVT--V 286 Query: 237 HSARIDTKPRG-WTKPSDHTPVIVSLDIP 264 +A I+T G PSDH PV L +P Sbjct: 287 SAAAINTYGSGSGQFPSDHLPVQARLRLP 315 >gi|282863431|ref|ZP_06272490.1| Endonuclease/exonuclease/phosphatase [Streptomyces sp. ACTE] gi|282561766|gb|EFB67309.1| Endonuclease/exonuclease/phosphatase [Streptomyces sp. ACTE] Length = 285 Score = 52.9 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 35/275 (12%), Positives = 78/275 (28%), Gaps = 42/275 (15%) Query: 4 VTVATWNVN-SIRARIHNLAAW------IKENNPDIICLQET------KTEDKNFPFETL 50 + VAT+N++ A + + ++ D+I LQE ++E ++ E Sbjct: 36 LRVATYNIHAG--AGMDGVFDLDRQAAQLRALGADVIGLQEVDAHWGARSEWRDLASELA 93 Query: 51 QSLNYHIET--CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108 + L+ ++ V + + +++ D + +T + Sbjct: 94 ERLHMNVSFAPVYSLDPVAVGEPRREFGVAVLSRYRILDAENHEITRLSTQDPDPVPAPA 153 Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168 R A I+ + + Sbjct: 154 PGFGEVLLRVRGLPVRVYVTHLDYRPDPSVRTV-------QVAETRRIMARDRGHRILLG 206 Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 N E+ +++L + +F + N RID + + Sbjct: 207 DFNATPDAPELAPLWKELTDAD-----------PGAPTF----PAADPVN---RIDFVAV 248 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 S + R+ T SDH P++ L++ Sbjct: 249 SKAGRTGAGQVRVREAAVAETLASDHRPLVADLEL 283 >gi|228919300|ref|ZP_04082670.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228840407|gb|EEM85678.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 272 Score = 52.9 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 34/271 (12%), Positives = 63/271 (23%), Gaps = 19/271 (7%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET--KTEDK----NFPFETLQS 52 + + T N +S + +I LA I+E D+I LQE + + N + Sbjct: 1 MKLLTLNCHSWQEENQIEKIQYLAKVIQEEEYDVIALQEVSQSIQAEIVCGNKKEDNFGL 60 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 L + + ++ + F + Sbjct: 61 LLLEELKELHVKDYNITWDFSHIGYDVYEEGLAIITKHNIIKEDTFFISENEDTTYWKTR 120 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 + D + + + + Sbjct: 121 KIVSTTLAYNGKDITFYSCHLGWWNDEEESFKGQVDRLMERVDSNKLAFLMGDFNNNARL 180 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 E + WD +RID I+ + Sbjct: 181 KGEGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWD------ENKHSLRIDLILCNQS- 233 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +HS+++ SDH V V LDI Sbjct: 234 -KKVHSSKVIFNGTNRNVISDHFGVEVQLDI 263 >gi|218961593|ref|YP_001741368.1| hypothetical protein; putative signal peptide [Candidatus Cloacamonas acidaminovorans] gi|167730250|emb|CAO81162.1| hypothetical protein; putative signal peptide [Candidatus Cloacamonas acidaminovorans] Length = 302 Score = 52.9 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 32/276 (11%), Positives = 65/276 (23%), Gaps = 33/276 (11%) Query: 2 SVVTVATWNVNSIRARIHN-----LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56 + + V TWN +R L I N ++I QE D N + + + Y+ Sbjct: 42 NTLDVITWN---LRNFPEGTDLTTLKEMISALNAEVIAFQEI--MDYNAFMDLAEDIPYY 96 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 + + + + F + + Sbjct: 97 AACVYSATDTYRLAYLYDTRSVTLNNQYTIFENDSNPFPRP------PYILDITWNNSNY 150 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 I + ++I + + + + Sbjct: 151 FIINNHFKAYGDNYIDESDSWDEEMRRRLACQKLDNYISTSLSDKKVIVLGDLNDQIAEP 210 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 + L YS Y + IDHI+++ E Sbjct: 211 EDYNVFLSFLNKPEEYYFADMPIALSPTYSNVSYPS------SLSHIDHILITNELFEDF 264 Query: 237 HSA-----------RIDTKPRGWTKPSDHTPVIVSL 261 +A + + + SDH PV + + Sbjct: 265 ENAGSYCRTILAENWMLSWNTYSSTISDHRPVGIRI 300 >gi|225159097|ref|ZP_03725404.1| endonuclease/exonuclease/phosphatase [Opitutaceae bacterium TAV2] gi|224802303|gb|EEG20568.1| endonuclease/exonuclease/phosphatase [Opitutaceae bacterium TAV2] Length = 262 Score = 52.9 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 40/287 (13%), Positives = 78/287 (27%), Gaps = 51/287 (17%) Query: 1 MS-VVTVATWNVN---SI---------RARIHNLAA---WIKENNPDIICLQETKTEDK- 43 MS + + T+N+ + R NL + PDI+ LQE D+ Sbjct: 1 MSQPLRIVTYNIAHGRGLAPIQGFSSKRQVRRNLLKISCLLANLKPDIVALQEI---DEN 57 Query: 44 -----NFP-FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA 97 NF E L+ + + I++ P + + A Sbjct: 58 SRWAGNFDHLELLRRAGRFKYAVFGVHNRREGLFNLNYGNAILSRHPILEWETTAFGSSK 117 Query: 98 TFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII 157 + I P+ + + + + + Sbjct: 118 VGEKGFLFVEIDIG--GRRVPVVNLHLHYRSRRHRLDQVDKVFDYLEARQKTTGPGWAMP 175 Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK 217 P +N DA +L + + + H +F S S Sbjct: 176 PVVCGDFNAADSPQDATASLLSQLNHFGGYAL---------HPLDGKRTFPSPLP-SRS- 224 Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 +D +++ + + + SDH PV+V + +P Sbjct: 225 -----LDFVLVPE--KQQVTKSEVVRSYL-----SDHRPVMVEMAVP 259 >gi|221068931|ref|ZP_03545036.1| Endonuclease/exonuclease/phosphatase [Comamonas testosteroni KF-1] gi|220713954|gb|EED69322.1| Endonuclease/exonuclease/phosphatase [Comamonas testosteroni KF-1] Length = 254 Score = 52.9 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 43/284 (15%), Positives = 86/284 (30%), Gaps = 66/284 (23%) Query: 3 VVTVATWNVN----SI----RARIHNLAAWIKENNPDIICLQET-KTE--DKNF------ 45 ++ VAT+N++ + R IHNL +++ + DI+CLQE K ++ + Sbjct: 14 ILRVATYNIHKGVQGLGPARRLEIHNLGLAVEQLDADIVCLQEVRKMNRKEEQYFDRWPN 73 Query: 46 --PFETLQSLNYHIET----CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF 99 E L Y + +G A+LS++ I D Q + Sbjct: 74 VPQAEYLAPEGYESVYLTNAYTRDGEHGNALLSRWPVIGYQHEDISDHRFEQRGLLHVEL 133 Query: 100 TINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159 I+ + + ++L + +I+R + + + + + Sbjct: 134 DIHGKRVHSIVVHLGLIPGSRVRQIALLQRFIEREVPPNAPLVVAGDFNDW--------- 184 Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK 219 + + + + + Sbjct: 185 -----------GNQIKRMLAGFGLFEYEETQGILTYPSRLPIAQ---------------- 217 Query: 220 GIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +DHI + T L K R W + SDH P+I + Sbjct: 218 ---LDHIYV-RGLTPLGLQV---PKGRIWWRMSDHLPLIAEFKL 254 >gi|326335669|ref|ZP_08201855.1| endonuclease/exonuclease/phosphatase [Capnocytophaga sp. oral taxon 338 str. F0234] gi|325692098|gb|EGD34051.1| endonuclease/exonuclease/phosphatase [Capnocytophaga sp. oral taxon 338 str. F0234] Length = 253 Score = 52.9 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 45/276 (16%), Positives = 75/276 (27%), Gaps = 38/276 (13%) Query: 3 VVTVATWNVNSIRARIHN-------LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55 + +ATWNV R + IKE N DI+ L E + L + Sbjct: 1 MYKIATWNV----ERPKKGTEKTALVMEEIKEVNADILVLTE---SAVSISLAELYPFSI 53 Query: 56 HI-ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 H + V+I SK++ + + I T+ + Sbjct: 54 HSLAYERTPEEHWVSIFSKWKITKQIETFDNFRTTCAVVETPFGKVIVFGTIIPYHQAGV 113 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQR----LELEEPLIFAGDYNIIPQPHDCYNPIIWE 170 G Y K + A + + P++ GD+N + Y Sbjct: 114 SGVRYGCLGYKQWEYHEKDLHQQAKEWGRILEQEGLPILIKGDFNQSRYNNQGYGTEKVR 173 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230 L + + +N IDHI +S Sbjct: 174 QILSDYLSQLDLTCITECDLSSFLHIDPIKHKV-------------RNN---IDHICISN 217 Query: 231 EATSLLHSARI---DTKPRGWTKPSDHTPVIVSLDI 263 + ++ D SDH V VS ++ Sbjct: 218 SLIRKVKGYQVGAWDHFSEEGKYMSDHNGVFVSFEM 253 >gi|261219142|ref|ZP_05933423.1| endonuclease/exonuclease/phosphatase [Brucella ceti M13/05/1] gi|261322204|ref|ZP_05961401.1| endonuclease/exonuclease/phosphatase [Brucella ceti M644/93/1] gi|260924231|gb|EEX90799.1| endonuclease/exonuclease/phosphatase [Brucella ceti M13/05/1] gi|261294894|gb|EEX98390.1| endonuclease/exonuclease/phosphatase [Brucella ceti M644/93/1] Length = 310 Score = 52.9 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 42/309 (13%), Positives = 78/309 (25%), Gaps = 75/309 (24%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQ--------SLNYHIETCGQKSYNGVAILSKYQP 76 I E DI+CLQE D + Y + + + ++ Sbjct: 6 IAETRADILCLQEV---DNLAALNAFEYGYLFKMIGYGYRHKYLIDGNDSRGIDVAVMMR 62 Query: 77 IEIVTHLPG------------------------------DDLDVQARFIEATFTINTQTL 106 P D + + I + L Sbjct: 63 DTTRDGQPIEVNEVTSHAHLTYSDFGIYQPELAELGLEPHDRIFKRDCLNVDLRIGGEPL 122 Query: 107 RIGNLYLPHGNPI----------TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI 156 + +L + + + + + E + GD+N Sbjct: 123 SLFVAHLKSMSGARNGQDGRTSSHPVRLAEARAIRRIIEEKFGIDRVTERRWLICGDFND 182 Query: 157 IPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS 216 + + +E + L GF + ++ + Sbjct: 183 YRERILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDRWTLYHTRGPLER 242 Query: 217 KNKGIRIDHIMLSPEATSLLHSA-------------------RIDTKPR-GWTKP--SDH 254 ++D+IM SP + A +D PR GW +P SDH Sbjct: 243 --HLCQLDYIMASPAFAAKNEHAVPDIIRRGQPWRTIFPPEQNVDRYPRTGWDRPKASDH 300 Query: 255 TPVIVSLDI 263 PV V+L++ Sbjct: 301 CPVSVTLNM 309 >gi|220929233|ref|YP_002506142.1| endonuclease/exonuclease/phosphatase [Clostridium cellulolyticum H10] gi|219999561|gb|ACL76162.1| Endonuclease/exonuclease/phosphatase [Clostridium cellulolyticum H10] Length = 366 Score = 52.9 bits (125), Expect = 6e-05, Method: Composition-based stats. Identities = 47/277 (16%), Positives = 75/277 (27%), Gaps = 38/277 (13%) Query: 2 SVVTVATWNVNSIRAR-----IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56 S + V WN N ++IK+ + D+ LQE L+Y Sbjct: 101 SPIKVICWNTN---LWDQDKDKDEFYSFIKKQDADVYLLQE--------------YLHYQ 143 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 E + Y I+ + + + +T R Sbjct: 144 TEKDSGQPYRLCNIVPGFPLHYMHFDDSERIRKEFPGYYFSTNNQFVIISRFPIKKSYTD 203 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ------PHDCYNPIIWE 170 T D I+ L +E + N Sbjct: 204 YSEQYTVSDVNINGRNVRFYNVHMLLHIETTNPLKPYFYDALHRRFLAREIGFKNLKRDL 263 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF----WDYYADSWSKNKGIRIDHI 226 + V F + MG D + H YS Y + RID Sbjct: 264 RNEKSDYFVAGDFNSTKAMGVMDDLLKDHIDGVRYSNDILPLSYQLYGFKL---WRIDFA 320 Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +L P+A + + K SDH P+++SLD+ Sbjct: 321 IL-PKANDNIR-FKTYKTI-SPDKLSDHDPIVLSLDV 354 >gi|282866534|ref|ZP_06275577.1| Endonuclease/exonuclease/phosphatase [Streptomyces sp. ACTE] gi|282558581|gb|EFB64140.1| Endonuclease/exonuclease/phosphatase [Streptomyces sp. ACTE] Length = 322 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 35/297 (11%), Positives = 63/297 (21%), Gaps = 57/297 (19%) Query: 2 SVVTVATWNV-----------------NSIRARIHNLAAWIKENNPDIICLQETKTEDKN 44 +V+ V TWNV NS ++ + E + D+I LQE Sbjct: 42 TVLRVVTWNVCGEAGGKRGEAGYCPYRNSPAEKVEQITELAHERDADVIALQEICGGAAG 101 Query: 45 FPFETLQ-SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 L+ +L A ++ L V + Sbjct: 102 SHLSLLRTALGPEWSVRR-------AEGARPDGRTRCRGGLSGHLGVAIAVRGKVVGARS 154 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 + + + + E G + + Q Sbjct: 155 RNVLPPDPAGHSHETLPVLCVRVSGWSYTPCTTHILPGEEPRVLEQITGVRDFVRQEDRP 214 Query: 164 Y----NPIIWENDACFTLEVRQSFQKLQNMGFTD---AIRATHDTHHLYSFWDYYADSWS 216 + A + +G +SF Sbjct: 215 TVLTGDFNRNSGAAQLKPLASAFTECPGLLGTGQGTSTYHQWMPAEGTHSFHT------- 267 Query: 217 KNKGIRIDHIMLSPEATSLL--HSARIDTKPRGW----------TKPSDHTPVIVSL 261 +DH+ +S + +D SDH PV + Sbjct: 268 ------LDHVFVSKASEVRAPFARCGVDRDRMDTTPNEAGGVEPDGYSDHAPVFADI 318 >gi|255721545|ref|XP_002545707.1| hypothetical protein CTRG_00488 [Candida tropicalis MYA-3404] gi|240136196|gb|EER35749.1| hypothetical protein CTRG_00488 [Candida tropicalis MYA-3404] Length = 350 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 33/260 (12%), Positives = 68/260 (26%), Gaps = 35/260 (13%) Query: 30 PDIICLQET---KTEDKNFPFETLQSLNYHIETCGQKSYNGVA--ILSKYQPIEIVTHLP 84 +IICLQE + +D + +Y +G IL K +I+ Sbjct: 103 ANIICLQEVLHNQLQDILNGLNEFEEWSYFGVGRTDGKTSGEYAPILYKKSEFDILDSKT 162 Query: 85 GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL 144 + + + + + I ++ R S Sbjct: 163 FWLSPTPDKPSKGWDAALERIVTVVTFQSKSSPSIRFNVFNTHYDHRGVVARRESSLFIA 222 Query: 145 EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL 204 ++ + + + + ++ + ++ + Sbjct: 223 DKLKNY--------NEYPSFLAGDLNTEPTDEPHSILESSGFKDSFKLIGKKYSYGYNTS 274 Query: 205 YSFWDYYADSWSKNKGIRIDHIM-----------------LSPEATSLLHSARIDTKPRG 247 ++ +D RID+I S L S I + Sbjct: 275 FTGFD-----KDNEPVSRIDYIWSPSYTTFDVGHESSKDEASNRFGVSLKSFGIVSNWFN 329 Query: 248 WTKPSDHTPVIVSLDIPEPR 267 SDH PV+ + +I PR Sbjct: 330 GNFFSDHRPVVATYEISRPR 349 >gi|229171215|ref|ZP_04298808.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus MM3] gi|228612295|gb|EEK69524.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus MM3] Length = 263 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 33/271 (12%), Positives = 63/271 (23%), Gaps = 19/271 (7%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET--KTEDKNFP----FETLQS 52 + + T N +S + +I LA I+E D+I LQE + N + Sbjct: 1 MKLLTLNCHSWQEENQMEKIKYLAKVIQEEEYDVIALQEVSQSIQAGNVCGNKKEDNFGL 60 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 L + + ++ + F + Sbjct: 61 LLLEELKALHVKDYNITWDFSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTTYWKTR 120 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 I + + ++ G + + Sbjct: 121 KIVSATIAYNDKNITFYSCHLGWWNDEEESFKDQVNRLMGRVDSNELSFLMGDFNNNARL 180 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 E + WD +RID I+ + Sbjct: 181 QGEGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWD------ENKHNLRIDLILCNQS- 233 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + S+++ SDH V V +DI Sbjct: 234 -EKVRSSKVIFNGTNRNVISDHFGVEVQVDI 263 >gi|134096002|ref|YP_001101077.1| DNase [Herminiimonas arsenicoxydans] gi|133739905|emb|CAL62956.1| Putative endonuclease/exonuclease/phosphatase family protein [Herminiimonas arsenicoxydans] Length = 264 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 37/282 (13%), Positives = 79/282 (28%), Gaps = 43/282 (15%) Query: 4 VTVATWNVN------SIRARIHNLAAWIKENNPDIICLQET----------KTED----- 42 + + T+N++ R RIH L I D++ LQE D Sbjct: 3 LRITTYNIHKGVSSFGARPRIHALKQAINAMQSDVLFLQEVQGRHDLHALKHATDWPELS 62 Query: 43 -KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI 101 ++F Y + ++G A+LS + + D + Sbjct: 63 QQDFLAGDSHQCAYGMNAVYDHGHHGNALLSCFPILSSRNQNISDHKYESRGILHCVVRA 122 Query: 102 NTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161 + ++L + I + + + + + + + Sbjct: 123 PEAEVHCFVIHLGLFAGSRKRQTAALIEAVSASAESGAPIIIAGDFNDWGNRLSEELRDT 182 Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI 221 + N + ++L G T + + Sbjct: 183 LGVTEVFDANLSRRG--FGTYLRQLSGRGTKIQPARTFPAAMPF---------------L 225 Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 ++D I + + SA + W K SDH P++ +L + Sbjct: 226 QLDRIYV-RGF--KVESAEVLHGAM-WGKLSDHAPIVANLQL 263 >gi|242043562|ref|XP_002459652.1| hypothetical protein SORBIDRAFT_02g008042 [Sorghum bicolor] gi|241923029|gb|EER96173.1| hypothetical protein SORBIDRAFT_02g008042 [Sorghum bicolor] Length = 593 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 38/261 (14%), Positives = 85/261 (32%), Gaps = 34/261 (13%) Query: 4 VTVATWNVNSI--RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + WN+ I +R + +I+E+N ++ +QET ++ + L+ + + Sbjct: 1 MRFLFWNIRGIGKSSRKRQVREFIEEHNLQVVGIQET-IKESFSDGDLLELAGNKVFSWK 59 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 + G + + + D+ + R N Sbjct: 60 WSAAKGKSGGILMGVNQEKLEMEACDILEYCVVMTIRN-------RFSNFRWVMVTVYGP 112 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 +++ ++ Q + P+I GD+N+I + D + + + Sbjct: 113 VQHEYSGDFLAELDSVCQQTV---LPIIIGGDFNLIREESDKNSDNVNFHLMDQFNTFIG 169 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL--LHSA 239 Q +R + Y++ + + N +D ++ S L + Sbjct: 170 DHQ----------LRELKRSGQRYTWTNKQSKPIMVN----LDRVLFSSGWEEKYPLSLS 215 Query: 240 RIDTKPRGWTKPSDHTPVIVS 260 T+ SDH+PVIV Sbjct: 216 WCLTRV-----GSDHSPVIVD 231 >gi|323494918|ref|ZP_08100010.1| putative phospholipase C [Vibrio brasiliensis LMG 20546] gi|323310882|gb|EGA64054.1| putative phospholipase C [Vibrio brasiliensis LMG 20546] Length = 441 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 38/287 (13%), Positives = 82/287 (28%), Gaps = 47/287 (16%) Query: 2 SVVTVATWNVNSIRA-------RIHNLAAWIKENNPDIICLQETKTE-DKNFPFETLQSL 53 + + + T+N+ ++ A R + ++K D++ LQE +F E + Sbjct: 176 NTLKMMTYNIWALTAIASHIEDRYQLIPEYVK--GYDVLALQEVFASGRDSFLRELAKEY 233 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 Y + + +N + + I Sbjct: 234 PYQTKMLDKDGFNIHDGGVMIVSRYPIVNQAQYVFPDCTGTDCFADKGVNYAEIIK---- 289 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + + ++ + ++ A NI Y+ N Sbjct: 290 ---GGKAYHIFATHTASYDTDTARDYRQRQFKQMRQLALSLNISQNETVVYSGDFNVNK- 345 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYS--FWDYYADSWS-------KNKGIRID 224 + A + Y+ +D + ++ +N +D Sbjct: 346 --------RKFPGDYQQMITNLSAIEPDYSGYTESTFDPRINDFAGEAMSGGENVEY-LD 396 Query: 225 HIMLSPEATSLLHSA---RID----TKPRGWTK--PSDHTPVIVSLD 262 ++M+S E + S+ R+D T R W SDH PV ++ Sbjct: 397 YVMVSNE--YQIKSSNDNRVDVPRSTGERLWKHYNLSDHFPVTAVIE 441 >gi|317495840|ref|ZP_07954203.1| endonuclease/Exonuclease/phosphatase [Gemella moribillum M424] gi|316914017|gb|EFV35500.1| endonuclease/Exonuclease/phosphatase [Gemella moribillum M424] Length = 696 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 14/85 (16%) Query: 199 HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT---KPSDHT 255 HD YS++ Y + S +D+I++S + + + + SDH Sbjct: 565 HDAGDRYSYF-YRGSNQS------LDNILVSKNIKDKVVFSPVHINASFMEEHGRASDHD 617 Query: 256 PVIVSLDIPEPRKKQQDSTSQNMKP 280 PV+V +D +P+ ST+ +KP Sbjct: 618 PVVVQIDFSKPK----QSTTPEVKP 638 >gi|224367710|ref|YP_002601873.1| hypothetical protein HRM2_05950 [Desulfobacterium autotrophicum HRM2] gi|223690426|gb|ACN13709.1| conserved hypothetical protein [Desulfobacterium autotrophicum HRM2] Length = 253 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 31/245 (12%), Positives = 54/245 (22%), Gaps = 22/245 (8%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQP 76 R + PD + QE +F L + +Q Sbjct: 29 RKKGYPLLFEHYQPDFVGFQEVNNFQADFLCRLLDGYGF--------IGRRDTSPELWQN 80 Query: 77 IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 I F+ T L + Sbjct: 81 NLIFYRKQWTCKAANHLFLSRTPQ--------KESRLDGSRWPRQCTLGQFEQGDMAVVM 132 Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIR 196 + E + + + + + Sbjct: 133 ANTHFDFAETVQALSAGLVVDFLSEFSPGSLTDLPTVITGDFNSIPGGAAHRVFLDNGFE 192 Query: 197 ATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTP 256 + H Y+F + K++G ID I+ T L + +I + PSDH P Sbjct: 193 DAFENAHAYTFHGFTG----KDRGGHIDWILYRGGITPL--NQKIVRERFSGHFPSDHFP 246 Query: 257 VIVSL 261 V+V Sbjct: 247 VLVEF 251 >gi|326430956|gb|EGD76526.1| hypothetical protein PTSG_07643 [Salpingoeca sp. ATCC 50818] Length = 291 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 43/262 (16%), Positives = 72/262 (27%), Gaps = 28/262 (10%) Query: 21 LAAWIKENNPD-IICLQET-KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIE 78 +A + D IICLQE + F + Y GVAI I Sbjct: 37 VAELLDLMESDSIICLQEVDHSWFGKFVL-LFEKEGYTFVPVTYSPLLGVAIAFPRARIG 95 Query: 79 IVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN-----------PITSTKYDDK 127 + + + + + Sbjct: 96 DLIPDCIGVRSISKLRDSTITAKRCWNVALQVHLTRSSGKGQDFAVTTYHMPCKFREPHV 155 Query: 128 ISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP--HDCYNPIIWENDACFTLEVRQSFQK 185 ++ L + P I AGD+NI P+ +D + L + Sbjct: 156 MAMHCSMLVKWAHNTANSLPYIVAGDFNIKPKDPCYDMIVNGFIHPEVKGALATPAATFN 215 Query: 186 LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKP 245 A+R H ++ W + +D+I LS E + ++ P Sbjct: 216 EVPKALRSALREHHGREPEFTNWTHEFQDT-------LDYIFLSDEWVVR-DACDPESFP 267 Query: 246 RG----WTKPSDHTPVIVSLDI 263 G SDH P+ +LD+ Sbjct: 268 EGPYPSERVVSDHIPLWATLDL 289 >gi|29893671|gb|AAP06925.1| putative reverse transcriptase [Oryza sativa Japonica Group] gi|108707404|gb|ABF95199.1| retrotransposon protein, putative, LINE subclass [Oryza sativa Japonica Group] Length = 870 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 34/271 (12%), Positives = 81/271 (29%), Gaps = 34/271 (12%) Query: 6 VATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +WNV + AR + + + + + C QETK + + Y ++ K Sbjct: 7 LISWNVRGLNSPARCNAVHELMLDTKCTLACFQETKLQSIDDGLARFLG-GYKLDKFAFK 65 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 G + + + + T + T + +Y P + + + Sbjct: 66 PARGTRGGILLLWSSGDFDVQEVRIGRFSISAQITDIRSGVTFLLTGVYGPTRHHLKDSF 125 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 +I + +N++ L + F Sbjct: 126 LRHIRRLRPSPGEGW-----------------LILGDFNMIYRARDKNNSNLNLARMRRF 168 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + + + I + +++ ++ K +++D + E + Sbjct: 169 RAVIDRCELHEIPLQN---RKFTW----SNERRKATLVKLDRCFCNEEWDLAFPHHVLHA 221 Query: 244 KPRGWTKPSDHTPVIVSLDIPEPRKKQQDST 274 P G PSDH P++ + P+ + T Sbjct: 222 LPTG---PSDHCPLV----LSNPQGPHRPRT 245 >gi|296269289|ref|YP_003651921.1| endonuclease/exonuclease/phosphatase [Thermobispora bispora DSM 43833] gi|296092076|gb|ADG88028.1| Endonuclease/exonuclease/phosphatase [Thermobispora bispora DSM 43833] Length = 246 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 16/35 (45%), Positives = 22/35 (62%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQE 37 ++ VAT+NV S+R L IK PD++CLQE Sbjct: 1 MLRVATYNVRSLRDDRAALVRMIKALRPDVLCLQE 35 Score = 39.0 bits (89), Expect = 0.77, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 3/41 (7%) Query: 222 RIDHIMLSPEATSLLHSARIDTKP-RGWTKPSDHTPVIVSL 261 RID I + S + +P + SDH PV+ L Sbjct: 188 RIDGIFADRGL--RVVSCAVAAEPIHDVVRASDHRPVVAVL 226 >gi|264676938|ref|YP_003276844.1| endonuclease/exonuclease/phosphatase [Comamonas testosteroni CNB-2] gi|299531500|ref|ZP_07044906.1| endonuclease/exonuclease/phosphatase [Comamonas testosteroni S44] gi|262207450|gb|ACY31548.1| endonuclease/exonuclease/phosphatase [Comamonas testosteroni CNB-2] gi|298720463|gb|EFI61414.1| endonuclease/exonuclease/phosphatase [Comamonas testosteroni S44] Length = 254 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 43/284 (15%), Positives = 86/284 (30%), Gaps = 66/284 (23%) Query: 3 VVTVATWNVN----SI----RARIHNLAAWIKENNPDIICLQET-KTE--DKNF------ 45 ++ VAT+N++ + R IHNL +++ + DI+CLQE K ++ + Sbjct: 14 ILRVATYNIHKGVQGLGPARRLEIHNLGLAVEQLDADIVCLQEVRKMNRKEEQYFDRWPN 73 Query: 46 --PFETLQSLNYHIET----CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF 99 E L Y + +G A+LS++ I D Q + Sbjct: 74 VPQAEYLAPEGYESVYLTNAYTRDGEHGNALLSRWPVIGYQHEDISDHRFEQRGLLHVEL 133 Query: 100 TINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159 I+ + + ++L + +I+R + + + + + Sbjct: 134 DIHGKRVHSIVVHLGLIPGSRIRQIALLQRFIEREVPPNAPLVVAGDFNDW--------- 184 Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK 219 + + + + + Sbjct: 185 -----------GNQIKRMLAGFGLFEYEETQGILTYPSRLPIAQ---------------- 217 Query: 220 GIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +DHI + T L K R W + SDH P+I + Sbjct: 218 ---LDHIYV-RGLTPLGLQV---PKGRIWWRMSDHLPLIAEFKL 254 >gi|116310953|emb|CAH67890.1| OSIGBa0153E02-OSIGBa0093I20.19 [Oryza sativa Indica Group] Length = 1752 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 39/271 (14%), Positives = 77/271 (28%), Gaps = 34/271 (12%) Query: 6 VATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 +WNV + AR + + + + ++ CLQETK ++ + Y ++ K Sbjct: 615 FISWNVRGLNSPARCNTVHEMMLDTKCNLACLQETKLQNIDDGLARFLG-GYKLDIFAFK 673 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 G L + + T + T + +Y P + + + Sbjct: 674 PATGTRGGILILWNSAALVLQDIRISRFLISAQVTVPLTGATFLMTGVYGPTRHRLKDSF 733 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 E + GD+NII + D N + Sbjct: 734 LRHIRRLKP----------NAGEGWLLFGDFNIIYRARDKNNGNLNLARMRRFRATIDRC 783 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + + +++ W +D + H + Sbjct: 784 ELHEIPLQNRRFTWSNERQ-----WPTLVK---------LDRCFCNENWDLAFHHHVLHA 829 Query: 244 KPRGWTKPSDHTPVIVSLDIPEPRKKQQDST 274 P G PSDH P++ + P ++ T Sbjct: 830 LPTG---PSDHCPLV----LSNPAAPRKPRT 853 >gi|323450905|gb|EGB06784.1| hypothetical protein AURANDRAFT_71945 [Aureococcus anophagefferens] Length = 1309 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 40/340 (11%), Positives = 81/340 (23%), Gaps = 85/340 (25%) Query: 5 TVATWNVNSIRARIHN----LAAWIKENNPDIICLQET---------------------- 38 T+ WNV ++++R + ++ D++ L E Sbjct: 29 TIICWNVENLKSRATQNRREVRDFLGACGADVVFLSEVKLAAHCDKGAKKGDGAPRNRRR 88 Query: 39 ---KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSK--------YQPIEIVTHLPGDD 87 K D L + + A + + P Sbjct: 89 VNDKFHDDKVQCAALLDVGPFAAPIYSLADWRYAGTCCLLRSDGPAPRRVSFSLEPPDAP 148 Query: 88 LDVQARFIEATFTINTQTLRIGN------LYLPHGNPITSTKYDDKISWIKRFLRFASQR 141 + + + + + N + ++ + W + FA Sbjct: 149 PARNSVAFADDHDPDGRVIVLEYETLVVLHTYSPNNGNDAKSFERRRLWEAKVRAFAEAV 208 Query: 142 LELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT 201 L++ GD N P D +P + R + + + Sbjct: 209 RVRGRSLVYVGDLNCAPTDDDLSHPAWFRAWNSNQPGKRLGKDRERLEADDEGQPGCTPR 268 Query: 202 HHLY-------------------------S----FWDYYAD---------SWSKNKGIRI 223 Y + + + KG+RI Sbjct: 269 ESRYFDALLRAGGLFDAFRDARGAGAGAATIEGPHFSWRGPPGRDGLPETGRYYGKGMRI 328 Query: 224 DHIMLSPEATSLLHSARID-TKP-RGWTKPSDHTPVIVSL 261 DH ++S + S + R SDH P+ + L Sbjct: 329 DHALVSTGVA--VESCDLLGRGVGRDGFMGSDHCPLRLVL 366 >gi|116311038|emb|CAH67969.1| OSIGBa0142I02-OSIGBa0101B20.12 [Oryza sativa Indica Group] Length = 1230 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 34/264 (12%), Positives = 71/264 (26%), Gaps = 36/264 (13%) Query: 15 RARIHNLA----AWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAI 70 R R +L ++ E N I C QETK + S Y +++ K G + Sbjct: 303 RQRAPHLTCAVHNFMAETNCTIACFQETKLRAMDDGLARFLS-GYKLDSYAIKPARGTRV 361 Query: 71 LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISW 130 + + L + N++T I +Y P + Sbjct: 362 GILLMWNSNLVDINEVRLRRFSMIARVNLLHNSETFFITAVYGPTTHREKYAFLRQIKRL 421 Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG 190 + D + + Sbjct: 422 KPADREPWLLFGDFNMIYRAC--------------------DKNNNNLNLRRMGHFRAAL 461 Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 ++ H + +++ ++ K +R+D + L I T Sbjct: 462 EHCELKEVHLQNRRFTW----SNERRKPTLVRLDRFYCNENW-DLGFGHHILHALSSGT- 515 Query: 251 PSDHTPVIVSLDIPEPRKKQQDST 274 SDH P++++ P+ ++ + Sbjct: 516 -SDHCPLLLT----NPQGPRRPRS 534 >gi|229154133|ref|ZP_04282258.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus ATCC 4342] gi|228629413|gb|EEK86115.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus ATCC 4342] Length = 263 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 33/271 (12%), Positives = 61/271 (22%), Gaps = 19/271 (7%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET------KTEDKNFPFETLQS 52 + + T N +S + +I LA I+E D+I LQE K N + Sbjct: 1 MKLLTLNCHSWQEENQIEKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGL 60 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 L + + ++ + F + Sbjct: 61 LLLEELKALHVKDYNITWDFSHIGYDVYEEGLAIVTKHNVIKEDTFFISENKDTAYWKTR 120 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 I + + + + + Sbjct: 121 KIVSATIAYNGKNITFYSCHLGWWNDEEESFGGQVNRLMERVDSNELSFLMGDFNNNARL 180 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 E + WD +RID I+ + Sbjct: 181 QGEGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWD------ENKHNLRIDLILCNRS- 233 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + S+++ SDH V V +DI Sbjct: 234 -EKVRSSKVIFNGTNRNIISDHFGVEVQVDI 263 >gi|58532125|emb|CAE04127.3| OSJNBa0009P12.14 [Oryza sativa Japonica Group] Length = 1206 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 34/264 (12%), Positives = 71/264 (26%), Gaps = 36/264 (13%) Query: 15 RARIHNLA----AWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAI 70 R R +L ++ E N I C QETK + S Y +++ K G + Sbjct: 279 RQRAPHLTCAVHNFMAETNCTIACFQETKLRAMDDGLARFLS-GYKLDSYAIKPARGTRV 337 Query: 71 LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISW 130 + + L + N++T I +Y P + Sbjct: 338 GILLMWNSNLVDINEVRLRRFSMIARVNLLHNSETFFITAVYGPTTHREKYAFLRQIKRL 397 Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG 190 + D + + Sbjct: 398 KPADREPWLLFGDFNMIYRAC--------------------DKNNNNLNLRRMGHFRAAL 437 Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 ++ H + +++ ++ K +R+D + L I T Sbjct: 438 EHCELKEVHLQNRRFTW----SNERRKPTLVRLDRFYCNENW-DLGFGHHILHALSSGT- 491 Query: 251 PSDHTPVIVSLDIPEPRKKQQDST 274 SDH P++++ P+ ++ + Sbjct: 492 -SDHCPLLLT----NPQGPRRPRS 510 >gi|254781003|ref|YP_003065416.1| hypothetical protein CLIBASIA_04520 [Candidatus Liberibacter asiaticus str. psy62] gi|254040680|gb|ACT57476.1| hypothetical protein CLIBASIA_04520 [Candidatus Liberibacter asiaticus str. psy62] Length = 304 Score = 52.5 bits (124), Expect = 6e-05, Method: Composition-based stats. Identities = 40/299 (13%), Positives = 80/299 (26%), Gaps = 59/299 (19%) Query: 4 VTVATWNVN------SIRARIHNLAA----------WIKENNPDIICLQETKTEDKNFPF 47 V + +WN+N + +++ + K + DI+ LQE Sbjct: 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE---------- 73 Query: 48 ETLQSLN-YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 + Y+ S + I +D+ + + Q+ Sbjct: 74 -----MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128 Query: 107 RI---GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL-----EEPLIFAGDYNIIP 158 + + + GN + L + + Sbjct: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188 Query: 159 QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFW---DYYADSW 215 Q + E+ F + + + D + L F D ++ Sbjct: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA- 247 Query: 216 SKNKGIR----IDHIMLSPEATSLLHS---ARIDTKP-----RGWTKPSDHTPVIVSLD 262 NK +R ID+ ++ A L + I RG + SDH P+ + D Sbjct: 248 --NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-KRLSDHCPISIDYD 303 >gi|332022825|gb|EGI63098.1| Putative neutral sphingomyelinase [Acromyrmex echinatior] Length = 391 Score = 52.5 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 47/282 (16%), Positives = 85/282 (30%), Gaps = 40/282 (14%) Query: 6 VATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDK--NFPFETLQSLNYH 56 V T N I R+ +A DIICLQE + + + + L + Sbjct: 9 VLTLNCWGIPYVSRNKNERMSAIAEKCISREYDIICLQEVWSVNDFNQIKTKVQEVLPHS 68 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT---QTLRIGNLYL 113 +G+ ILS+Y +++ H + V F +++ N+Y+ Sbjct: 69 HYFHSGVLGSGICILSRYPIHDVMFHKWPLNGYVHKIHHGDWFGGKGVGLCKIKVFNMYI 128 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLI--------FAGDYNIIPQPHDCYN 165 +Y+ + + + FAGD N PQ Sbjct: 129 NVYITHLHAEYNRENDEYMAHRVLQAFDTAQFVKMTSGGVDAVIFAGDLNTEPQDLAYRI 188 Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225 A + + + + Y+ + ++ G RIDH Sbjct: 189 IRGVSGLADTCPDSQSHIGTNECAN------------NSYT---SSKLARTQPNGKRIDH 233 Query: 226 I--MLSPEATSLLHSARI---DTKPRGWTKPSDHTPVIVSLD 262 I + S + + + P SDH V+ +L Sbjct: 234 IMYLGSNTVKVEVTNFGHPLPNRVPYKNFSYSDHEAVMATLK 275 >gi|291515956|emb|CBK65166.1| Metal-dependent hydrolase [Alistipes shahii WAL 8301] Length = 327 Score = 52.5 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 43/303 (14%), Positives = 79/303 (26%), Gaps = 51/303 (16%) Query: 2 SVVTVATWNV-NSIRA----RIHNLAAWIKENNPDIICLQETKTEDKNFPF--------- 47 + + + WN+ N + + W++ +PD+ C E ++ Sbjct: 34 NNMRLLYWNIQNGMWSGQGDNYDKFVEWVRAYDPDV-C---VWCEAQSIYKTGTADKMDV 89 Query: 48 ----------ETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA 97 E + G N +++ PIE V + G D Sbjct: 90 ADRYLVGNWGELAARYGHKYWYMGGHRDNYPQVITSKYPIENVERIVGSKPDSVVTHGAG 149 Query: 98 TFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII 157 I + + ++ K R + +E I + + Sbjct: 150 WARIEKNGKTVNIV--TLHTWPQGYAFEAKDRDASRAENGGDKYRRMEMEYICNHTIHSV 207 Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADS--- 214 P + D F K + H Y D A Sbjct: 208 P--GAEKQFWMMMGDFNARSSRDNWFYKYPAGDTRFLVHDYILRHTPY--VDVIAGKYPG 263 Query: 215 -WSKNKG--IRIDHIMLSPEATSLLHSARIDTKPRGWT-----------KPSDHTPVIVS 260 + G RID + +P + A + T PSDH P++V Sbjct: 264 EFKTTTGGKSRIDFVYCTPPLYERITHADVVTDAYTEPVRDPAKLSNFWHPSDHRPIVVD 323 Query: 261 LDI 263 ++ Sbjct: 324 FNM 326 >gi|229083666|ref|ZP_04215990.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-44] gi|228699629|gb|EEL52290.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-44] Length = 263 Score = 52.5 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 50/288 (17%), Positives = 85/288 (29%), Gaps = 53/288 (18%) Query: 4 VTVATWNVNS---------IRARIHNLAAWIKENNPDIICLQET----KTED-------K 43 + + T N +S IR +LA I+E + D+I LQE K ++ Sbjct: 1 MKLLTLNCHSWQEENQLEKIR----HLAKTIQEEDYDVIALQEVSQSIKAQNVCDNKKKD 56 Query: 44 NFPFETLQSL------NYHIETCGQKSYNGVA--ILSKYQPIEIVTHLPGDDLDVQARFI 95 NF L L NY+I + ++ IV Q Sbjct: 57 NFGLILLTELEKLGLGNYNIVWDFSHIGYDIYEEGIAIITKYPIVKQGSFFVSASQDTTY 116 Query: 96 EATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYN 155 T I T+ + + D++ S+ + R E + N Sbjct: 117 WKTRKIVHATISYQGKNITFYSCHLGWWNDEEESFKGQVNRLIEYVNGDELSFLMGDFNN 176 Query: 156 IIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW 215 + Y+ +I + + + G WD Sbjct: 177 NAHLRGEGYDYLIRKGLYDTYELAMEKDEGTTVQGKIAG-------------WD------ 217 Query: 216 SKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + +RID I + + S+++ SDH V V LD+ Sbjct: 218 ENKQNLRIDLIFTNRP--KKVLSSKVIFNGVNRNVISDHFGVEVQLDM 263 >gi|121595605|ref|YP_987501.1| endonuclease/exonuclease/phosphatase [Acidovorax sp. JS42] gi|120607685|gb|ABM43425.1| Endonuclease/exonuclease/phosphatase [Acidovorax sp. JS42] Length = 291 Score = 52.5 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 40/300 (13%), Positives = 74/300 (24%), Gaps = 52/300 (17%) Query: 4 VTVATWN---VNSIRARIH--NLAAW-IKENNPDIICLQETKT-----------EDKNFP 46 + + TWN + R+ + + + + D++CLQE + Sbjct: 1 MQLVTWNTQWCRGLDGRVDPARIVQYALALGDVDVLCLQEIAVNYPGLAGAPGDQVAQVQ 60 Query: 47 FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 + + A + I T LP L + + Sbjct: 61 SAL--PAGWQVFFGAAVDE-WTAAGRQRFGNLIATRLPVLQLQHHPLPYPPDAGVRSMPR 117 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 L + + + + R A L PQ +P Sbjct: 118 LCSVLTVQDPALGPVRVMTTHLEYYSKPQRMAQALALRALHLQACAQAAQPPQGLADGSP 177 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI--- 223 + + + + A D + W R+ Sbjct: 178 FQPKAHTPHAVLCGDFNLQAHEPEYAVLAAALADEEGATAGQAGQPPLWDA---WRLLHP 234 Query: 224 ----------------------DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 D I +S S + + R+D G T+ SDH PV++ L Sbjct: 235 GAPQPPTFCVFDQTYAPQPLACDFIWVSDSLRSRVRAVRVD----GVTQASDHQPVLLEL 290 >gi|229113160|ref|ZP_04242656.1| hypothetical protein bcere0018_53700 [Bacillus cereus Rock1-15] gi|228670307|gb|EEL25654.1| hypothetical protein bcere0018_53700 [Bacillus cereus Rock1-15] gi|324323750|gb|ADY24794.1| hypothetical protein YBT020_28189 [Bacillus thuringiensis serovar finitimus YBT-020] Length = 237 Score = 52.5 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 34/259 (13%), Positives = 66/259 (25%), Gaps = 23/259 (8%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V WN + RA + + DI+ + E E + I+ G Sbjct: 1 MKVVAWNAD--RAFRKKIDKIL-PLKADILIISEC---------EKPEKWGQVIDEKGIV 48 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 + I A + + + ++ + Sbjct: 49 EFLWEGDNPNKGIGIITFDEKYQIETHPAYDKSFRYIVPYKVSVGKLEFILFAVWSQKGE 108 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + +L L++P I GD+N + F Sbjct: 109 KRYDSYIGQIYLALEKYASLLKKPCIIVGDWNSNKLFDHIKRVKTYSEVVEFLEGFGIKS 168 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + H + + + + ID + S L S I + Sbjct: 169 AYHH------LSKKEHGEELKATHYFRKEKARPFH----IDFLFASNLLLDQLKSFHIGS 218 Query: 244 KPRGWTKPSDHTPVIVSLD 262 + W + SDH P+I + Sbjct: 219 RE-DWIEFSDHMPIIAEFN 236 >gi|242096158|ref|XP_002438569.1| hypothetical protein SORBIDRAFT_10g022040 [Sorghum bicolor] gi|241916792|gb|EER89936.1| hypothetical protein SORBIDRAFT_10g022040 [Sorghum bicolor] Length = 1088 Score = 52.5 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 30/267 (11%), Positives = 70/267 (26%), Gaps = 38/267 (14%) Query: 4 VTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQET---KTEDKNFPFETLQSLNY 55 +++ +WN + ++ +LA I N +I L ET K + + Y Sbjct: 1 MSLLSWNCQGVGGSLDSPKMRHLARLINSTNAQVIFLSETRNTKITKNDLINKFNLENAY 60 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 I G + + + I + + + F + + PH Sbjct: 61 TISAEGLSGGLWLLSRDQVEVSVIESCNFYFLAICYHKHVRKKFGL------VCVYGDPH 114 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + + ++ + P Sbjct: 115 RRRTAWIWRQIRHFVMSNQDLPVICMGDMNNIMNVTEKLGPRP----------------- 157 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 ++ + Y++ + S+ + R+D + E + Sbjct: 158 --ANQRLISNFCCLVKDCGFFDLGYHGPAYTWSNKRFSSFPTYE--RLDRFFGNAEWCAN 213 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262 + + P SDH P++ L+ Sbjct: 214 FPNTSVFHLPM---LYSDHAPILAVLN 237 >gi|147800373|emb|CAN70928.1| hypothetical protein VITISV_016057 [Vitis vinifera] Length = 2064 Score = 52.5 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 8/38 (21%), Positives = 20/38 (52%), Gaps = 2/38 (5%) Query: 4 VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETK 39 + + +WN + +R + +++ D++ +QETK Sbjct: 1212 IKIISWNTRGLGSRKKRRVVKDFLRSEKXDVVMIQETK 1249 >gi|47220750|emb|CAG11819.1| unnamed protein product [Tetraodon nigroviridis] Length = 451 Score = 52.5 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 46/290 (15%), Positives = 75/290 (25%), Gaps = 47/290 (16%) Query: 4 VTVATWNVNSIRARIHNLA-------AWIKENNPDIICLQETKTE-DKNFPFETLQSLNY 55 V V + N IR ++ + + DI+ LQE +E D F + L S + Sbjct: 4 VRVFSLNCWGIRYLSKHVRQRYAMIGDMLSKEKHDIVLLQEVWSEKDYLFLKQKLSSCHP 63 Query: 56 HIETC-------------GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN 102 H + + + H Sbjct: 64 HSHYFKSGVIGSGLALFSKHRIQDAFLYRYSLNGYPYMAHHGDWFGGKAVGLAVLNIGSL 123 Query: 103 TQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD 162 T + + +L+ + ++ +F + +I GD N+ PQ Sbjct: 124 TANVYVTHLHAEYCRDRD-PYLPHRVVQAWELQQFVRHTSAGADVVILGGDLNMHPQDLG 182 Query: 163 CYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR 222 C LE + + + +KGIR Sbjct: 183 CRLLRTSTGLRDSYLETSKFDGCENGVTLIPENPFICEKELG-----------PFDKGIR 231 Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKP---------SDHTPVIVSLDI 263 ID+IM A I TK SDH V L + Sbjct: 232 IDYIMFKGS-----SKASICCDFMCTTKGSVSNQPFPYSDHEAVTAHLRL 276 >gi|329767831|ref|ZP_08259347.1| hypothetical protein HMPREF0428_01044 [Gemella haemolysans M341] gi|328838932|gb|EGF88526.1| hypothetical protein HMPREF0428_01044 [Gemella haemolysans M341] Length = 748 Score = 52.5 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 33/85 (38%), Gaps = 10/85 (11%) Query: 199 HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT---KPSDHT 255 H+ YS++ Y + S +D+I++S + + + + SDH Sbjct: 575 HEQGDRYSYF-YRGSNQS------LDNILISKNIKDKVVFSPVHINASFMEEHGRASDHD 627 Query: 256 PVIVSLDIPEPRKKQQDSTSQNMKP 280 PV+V +D + TS P Sbjct: 628 PVVVQIDFSKKEVSTTPETSPASTP 652 >gi|189466215|ref|ZP_03015000.1| hypothetical protein BACINT_02585 [Bacteroides intestinalis DSM 17393] gi|189434479|gb|EDV03464.1| hypothetical protein BACINT_02585 [Bacteroides intestinalis DSM 17393] Length = 370 Score = 52.5 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 41/268 (15%), Positives = 95/268 (35%), Gaps = 18/268 (6%) Query: 4 VTVATWNVNSIRARI-----HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 + VAT+NV + I +A ++K+ D++C QE ++++FP ++++++ H Sbjct: 111 LKVATYNVGNFGTEITGYSCKEIARYMKQQEVDVLCFQEF-GDNQHFPMDSIRNVFSHWR 169 Query: 59 T---CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + S +GV ++ + ++ ++ + T+R+ N +L Sbjct: 170 YALIPTEDSISGVLPIAIFSRYPLINPRFISYPQSANCSMQCDIILGRDTVRLLNNHLQT 229 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + + + ++ R + ++ + Q + + + Sbjct: 230 TSVNQNRRKWERGLNNTNDTRREVEVVQGAINTLHDNFVKRAEQTDSIRQLAL---ASPY 286 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 ++ V F L + + S Y + +RID+I SP Sbjct: 287 SVVVCGDFNSLPSSYTYAELSDILKDGFRTSGRGYMYTFRYFKRLLRIDYIFHSPAIQ-- 344 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 SDH PV++ + I Sbjct: 345 ----GYRYYSPDLDLCSDHNPVLMEMKI 368 >gi|148927868|ref|ZP_01811284.1| Endonuclease/exonuclease/phosphatase [candidate division TM7 genomosp. GTL1] gi|147886783|gb|EDK72337.1| Endonuclease/exonuclease/phosphatase [candidate division TM7 genomosp. GTL1] Length = 248 Score = 52.5 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 30/263 (11%), Positives = 60/263 (22%), Gaps = 24/263 (9%) Query: 4 VTVATWNV--NSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 + + NV N R+ + I + PDI+CLQE P + Sbjct: 1 MKLLQLNVWQN----RLHKQVLDLIAKEQPDILCLQEI-CSSNYVPPLFPGFAGFEAIQA 55 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 Y P+ G +T+ + I Y Sbjct: 56 ALPDYESHFAPCFSSPL------FGSTCSFGNAIFSRFPLADTEIIFINGQYQEGVELFD 109 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL--E 178 + + + + + + + + + Sbjct: 110 RNTTNIRNLQRTAVKTPEGEFCLINHHAFWVPNEMGSQESVEKMQRTADVIKSSPRPLVF 169 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 ++ D Y+ + + K + DHI +S Sbjct: 170 SGDLNVVSKSPAMKSIHALLRDLTEEYNIPTTLSG-FGKVPNVPCDHICVSEGI------ 222 Query: 239 ARIDTKPRGWTKPSDHTPVIVSL 261 +I SDH + + Sbjct: 223 -QIQKFGAKQDIVSDHLALTLEF 244 >gi|147770044|emb|CAN74335.1| hypothetical protein VITISV_010831 [Vitis vinifera] Length = 644 Score = 52.5 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 25/247 (10%), Positives = 68/247 (27%), Gaps = 30/247 (12%) Query: 15 RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKY 74 R++ + + I+ D+ C+QETK + E ++SL Sbjct: 143 RSKRKVIKSVIRNQKVDLFCIQETKMQV--MSEEVVRSLG----------LGRFLDWRVL 190 Query: 75 QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRF 134 + + + I + G+ + + Sbjct: 191 NAMGTAGGVLIYWDKRLLEILGVEEG----QFSISCRFRNVGDEGIWVFMGVYGPFSREE 246 Query: 135 LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDA 194 E G + ++ I+++++ + + ++ + Sbjct: 247 RECL-----WEVFGAIRGLWEEPWCLGGDFHTILYQSERSRNGRITSAMRRFAQIIDDLR 301 Query: 195 IRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP-SD 253 + +++ + + ++D + +P R +P SD Sbjct: 302 LVDFPLQGGSFTW----SGGLNNQSRTKLDRFLATPNWLDQYSRVY----QRRLFRPTSD 353 Query: 254 HTPVIVS 260 H PV++ Sbjct: 354 HFPVLLE 360 >gi|329964595|ref|ZP_08301649.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides fluxus YIT 12057] gi|328524995|gb|EGF52047.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides fluxus YIT 12057] Length = 286 Score = 52.5 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 37/272 (13%), Positives = 78/272 (28%), Gaps = 32/272 (11%) Query: 6 VATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56 V T+N+ N+ + R N I PD++ +QE ++ + Q L + Sbjct: 32 VMTFNIRLDAPSDSANNWKYRKDNACKMIAYYQPDLLGMQEV-CHNQM--EDLKQGLPQY 88 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ-----TLRIGNL 111 + A + + + T I + + Sbjct: 89 TALGVGRDDGKEAGEYCPVFFKTDRFTLVEYGNFSLSEHPDTIGIKGWDASYNRVTTWAV 148 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 N ++ + + R +L L + P I Sbjct: 149 LQEKSNGKKFVYFNTHLDNDGKIARKEGVQLILNKIK-----------EIAPDVPAIITG 197 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 D + + + A +SF D ++ + ID++ ++ Sbjct: 198 DFNCEPDEEPLQILEKGGMQNTSETAGITYGPSWSFHD--FGRIPLDERVLIDYVFVTDG 255 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + ++ R+ SDH PV+V+L + Sbjct: 256 --AKVNRYRVIQDAPENGFLSDHCPVLVNLTL 285 >gi|293602541|ref|ZP_06684987.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] gi|292819303|gb|EFF78338.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] Length = 288 Score = 52.5 bits (124), Expect = 7e-05, Method: Composition-based stats. Identities = 38/306 (12%), Positives = 91/306 (29%), Gaps = 60/306 (19%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENN-------PDIICLQETK----------TEDK 43 MS++ V ++N++ R+ + + E PD++ LQE + + + Sbjct: 1 MSLIRVVSYNIHKGRSALGR-RDSLNELRLGLYGLRPDLVFLQEVQGRNEQKSLLDAQHE 59 Query: 44 NFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 + + Y + +G A+LS++ ++ D Q + A ++ Sbjct: 60 SLAAALRLDVAYGRNAIRHATDHGNALLSRFPILDHENVDISDHRLEQRGLLHARIEVDE 119 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 + + ++L + + I+ + L + + + Sbjct: 120 RPVHCFVVHLGLFAGSRTRQVLALTERIRCMVPDGEPILIAGDFNDWNDRLAPLFVQQLG 179 Query: 164 YNPIIWENDACFTLEVRQS-------------------------FQKLQNMGFTDAIRAT 198 + E+ + Q Sbjct: 180 LYEVFSHAPRSHGGELPRLRDSVKRLSNALRGLPNGGLSVLERTNQLGMEGSAGLLQPPP 239 Query: 199 HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVI 258 ++ ++ R+D I + SAR+ R W + SDH+P++ Sbjct: 240 RTFPAVFPWF-------------RLDRIY-QRGFA--VRSARVLRG-REWARLSDHSPLL 282 Query: 259 VSLDIP 264 L++P Sbjct: 283 AELELP 288 >gi|121608305|ref|YP_996112.1| endonuclease/exonuclease/phosphatase [Verminephrobacter eiseniae EF01-2] gi|121552945|gb|ABM57094.1| Endonuclease/exonuclease/phosphatase [Verminephrobacter eiseniae EF01-2] Length = 245 Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 31/269 (11%), Positives = 71/269 (26%), Gaps = 41/269 (15%) Query: 3 VVTVATWNVN--------SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 ++ VA++N++ R IHNL I++ + DI+CLQE + Sbjct: 6 ILRVASYNIHKGVQGIGPGRRLEIHNLGLAIEQLDADIVCLQEVR----KLHRRE----- 56 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 L+ + + + + + Sbjct: 57 -QAYFQRWPELPQAQFLAPEGYEAVYRTNAVTRHGEHGNALLSRWPVIGH---------- 105 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 ++ +++ + + + L + A Sbjct: 106 QHQDLSDHRFEQRGLLHVQLDVHGRPLHVIVVHLGLIAGSRMRQIERLQGFIEREVPSAA 165 Query: 175 FTLEVRQSFQKLQNMGFTDAIRA--THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 + + A A D +++ ++ +++DH+ Sbjct: 166 PLVVAGDFNDWGVQVKRMLAGFALLEFDAPRAFTYP-------ARLPLVQLDHVYA-RGL 217 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 L + R W + SDH P+I Sbjct: 218 APLSLHV---PRGRIWWRMSDHLPLIAEF 243 >gi|291515600|emb|CBK64810.1| Endonuclease/Exonuclease/phosphatase family [Alistipes shahii WAL 8301] Length = 816 Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 37/304 (12%), Positives = 77/304 (25%), Gaps = 55/304 (18%) Query: 4 VTVATWNV-NSIRA----RIHNLAAWIKENNPDIICLQETKTEDK----------NFPFE 48 + V WN+ N + + +N AW+K+ +PDI C E Sbjct: 522 LRVLYWNIQNGMWSDQANNYNNFVAWVKKYDPDI-C---VWCESATIYKDNTNSAQASSA 577 Query: 49 TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT--------------HLPGDDLDVQARF 94 + + + +T G + A Sbjct: 578 RFLPDGWAALAARYGHAYTAVGGWRDNYPQTITSKYPIETLLKITDSDQAGKPVSHGAAI 637 Query: 95 IEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDY 154 T T + + + + + K ++ ++ Sbjct: 638 QRVTVKGRTINIVTLHTWPQAYGFGVGSADQAASAANKEGDKYREFEIKYICAQTVNNPA 697 Query: 155 NIIPQPHDCYNPIIWENDACFT----LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWD- 209 Q + A E ++ ++ + SF Sbjct: 698 YASCQDWLMMGDFNSRSRADNWYYGYPENDTRLLVHNHILDHTNLKDIIAERYPGSFISS 757 Query: 210 YYADSWSKNKGIRIDHIMLSPEATSLLHSA--RIDTKPRGWTKP--------SDHTPVIV 259 Y ++ RID++ SP + + +A +D P SDH P++ Sbjct: 758 TYGNA-------RIDYMYASPSMYARIVNALTVMDKWTTATQSPYVSNFYDPSDHRPILA 810 Query: 260 SLDI 263 ++ Sbjct: 811 DFEL 814 >gi|114605929|ref|XP_518271.2| PREDICTED: TRAF and TNF receptor-associated protein [Pan troglodytes] Length = 384 Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 36/240 (15%), Positives = 68/240 (28%), Gaps = 46/240 (19%) Query: 2 SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 S+ ++ TWN++ + RAR + +++ +PD+I LQE P Sbjct: 142 SMFSLITWNIDGLDLNNLSERAR--GVCSYLALYSPDVIFLQEV------IPP------- 186 Query: 55 YHIETCGQKSYNGVAI-LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 Y+ + S + + I+ L Q + + L + Sbjct: 187 YYSYLKKRSSNYEIITGHEEGYFTAIMLKKSRVKLKSQEIIPFPSTKMMRNLLCVHVNVS 246 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + + ++ + + L+ Q +I+ D Sbjct: 247 GNELCLMTSHLESTRGHAVERMNQLKMVLK-------------KMQEAPESATVIFAGDT 293 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG------IRIDHIM 227 L N H Y+ WD +S N G +R D I Sbjct: 294 NLRDREVTRCGGLPNNIVDVWEFLGKPKHCQYT-WDTQMNS---NLGITAACKLRFDRIF 349 >gi|171321352|ref|ZP_02910309.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria MEX-5] gi|171093370|gb|EDT38560.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria MEX-5] Length = 286 Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 18/41 (43%), Gaps = 4/41 (9%) Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 D + ++ + ID R SDH PV++ L++ Sbjct: 250 DFVFVTATLLPRVTRCEIDGDVR----ASDHQPVVLELEVD 286 >gi|228995734|ref|ZP_04155396.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock3-17] gi|228764016|gb|EEM12901.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock3-17] Length = 263 Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 43/286 (15%), Positives = 81/286 (28%), Gaps = 49/286 (17%) Query: 4 VTVATWNVNS---------IRARIHNLAAWIKENNPDIICLQET----KTED-------K 43 + + T N +S IR +LA I+E D+I LQE K ++ Sbjct: 1 MKLLTLNCHSWQEENQIEKIR----HLAKTIQEEGYDVIALQEVSQSIKAQNVCGNKKKD 56 Query: 44 NF------PFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA 97 NF E L S NY+I + + +++ Sbjct: 57 NFGLVLLAELEKLGSGNYNIVWDYSHIGYDIYEEGSAIITKHPIVKQDSFFVSESK---- 112 Query: 98 TFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII 157 +T + + + + + +++ + + Sbjct: 113 ----DTSYWKARKIVSATVSYKGKNMTFYSCHLGWWNDEEETFQGQVDCLTQHVNEKELS 168 Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK 217 D N + + L + + + D WD Sbjct: 169 ILMGDFNNNARLQGEGYDYLMQKGLYDTYELAFKKDEGTTVQGKIAG---WD------EN 219 Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + +RID I+ + + S+++ SDH V V LDI Sbjct: 220 KQNLRIDLILSNKP--KTVISSKVIFNGINRNIISDHFGVEVQLDI 263 >gi|147854851|emb|CAN78599.1| hypothetical protein VITISV_001333 [Vitis vinifera] Length = 751 Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 29/260 (11%), Positives = 71/260 (27%), Gaps = 49/260 (18%) Query: 4 VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + +WNV ++ + A+I++ D++C+QETK + G Sbjct: 17 LKLLSWNVRGANGSSKRKIIKAFIRKQKVDLLCIQETK---------------FQSMIEG 61 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 G ++ ++ G + RF ++ PIT Sbjct: 62 VVRSLGTGRFLDWRALDASGSTGGILICWDKRFRNVENG-------FVWVFTGVYGPITK 114 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + + + + L + + L + Sbjct: 115 EERECLWEELGAIRGIWEEPWCLGGXFNIIXFQREXSRQGRLTTTMRRFXQIIDELGLVD 174 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSAR 240 + L+++ N+ R+D +++P + + Sbjct: 175 LPLQR----------------GLFTW-----SGGQNNQSWARLDKFLVTPSWL--VQFSG 211 Query: 241 IDTKPRGWTKPSDHTPVIVS 260 + DH P+++ Sbjct: 212 VLQSRLPRPIF-DHFPILLE 230 >gi|332142708|ref|YP_004428446.1| Endonuclease/exonuclease/phosphatase [Alteromonas macleodii str. 'Deep ecotype'] gi|327552730|gb|AEA99448.1| Endonuclease/exonuclease/phosphatase [Alteromonas macleodii str. 'Deep ecotype'] Length = 237 Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 37/278 (13%), Positives = 85/278 (30%), Gaps = 57/278 (20%) Query: 5 TVATWNVN-SI----RARIHNLAAWIKENNPDIICLQE--TK------TED-KNFPFETL 50 + T+N++ I + + ++ + D++ LQE T+ +D ++ E Sbjct: 3 RIVTYNIHSGIGRDKKQDYKRIGQFLASSGADVVLLQEMDTRPPERDTAQDVRDICAENT 62 Query: 51 QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 L + G AIL++Y + T L + N Sbjct: 63 FKLIPSPAIREADGWYGNAILTRYDVLSNDTVDVSQSGRQPRNVQIVELKTEKTPLTVVN 122 Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170 + +++ + + L+ L Sbjct: 123 THKGLKKLERRSQFSLLHEHLSQRLKEKQTPLV-------------------------LA 157 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230 D ++F+ L ++ F + AT S + ++ +D + ++ Sbjct: 158 GDFNEWQFFSKAFKGLNSLLFQQKVGATFP-----SHFPVFS----------LDRVWVTD 202 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268 + + + R SDH PV++ +++PE Sbjct: 203 DI--KVKACRKLKNA-KTRVYSDHLPVLIDIELPESPD 237 >gi|147836454|emb|CAN59718.1| hypothetical protein VITISV_032347 [Vitis vinifera] Length = 1198 Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 36/261 (13%), Positives = 81/261 (31%), Gaps = 35/261 (13%) Query: 4 VTVATWNVNSIRARIHNLAA--WIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + +WN + +R ++ NPD++ LQETK + + + Sbjct: 637 MKILSWNTRGLGSRKKRRTXRRFLSTQNPDVVMLQETK----------REIWDRRSVSSV 686 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 K + + L +F + + + ++ + G + Sbjct: 687 WKGKSLDWVALPACGAS----GGIVILWDSXKFXCSXKVLGSFSVTVKLNSDEEGFFWLT 742 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFA--GDYNIIPQPHDCYNPIIWENDACFTLEV 179 + Y + ++ Q L + GD+N+I + + + E Sbjct: 743 SVYGPNKAVWRKDFWMELQDLHGLTFPRWCVGGDFNVIRRISEKMGDSRLTVNMRCFDEF 802 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + + +++ + D K R+D + S E S + Sbjct: 803 I----------RESGLLDPPLRNAAFTWSNMQVDPICK----RLDRFLFSSEWDSFFSQS 848 Query: 240 RIDTKPRGWTKPSDHTPVIVS 260 + PR SDH+P+ + Sbjct: 849 IQEALPRXT---SDHSPICLE 866 >gi|123473915|ref|XP_001320143.1| Endonuclease/Exonuclease/phosphatase family protein [Trichomonas vaginalis G3] gi|121902942|gb|EAY07920.1| Endonuclease/Exonuclease/phosphatase family protein [Trichomonas vaginalis G3] Length = 407 Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 34/287 (11%), Positives = 83/287 (28%), Gaps = 36/287 (12%) Query: 6 VATWNV-NSIRARIHNL------------------AAWIKENNPDIICLQETKTEDKNFP 46 + +WN+ S + + A + E +PDII LQE + + Sbjct: 128 ILSWNILAS-KVARRDFYPLSTEKCMATYYRDTLTAQIVDEIHPDIIALQEFEARQASDW 186 Query: 47 FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 + Y + + Y + T + + + +++ + Sbjct: 187 SKPFIENGYWVTVAPKGRYYTKKPADQLFVHGQATFVNLHRF--DVLISQLFYPRDSKLV 244 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 + + + + S + + ++ + + II + + Sbjct: 245 SADDTDIKGCDDVVLITAVRTHSKPSKNYIILNVHMKFNDAEVRKRLAEIIMKETLNFAH 304 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226 ++ + + + ++ +S + K+ RIDHI Sbjct: 305 QQFKVFGIIVVGDFNDKTNSPTLQRFYDFKLSNIYDAFHS--TVNTAIFQKDDAARIDHI 362 Query: 227 MLSPEATSLLHS----------ARIDTKPRGWTKPSDHTPVIVSLDI 263 ++S + S A + PSDH P+ ++I Sbjct: 363 LISKNI--KVKSILSQDTYGQLAEAHPFIPCYGFPSDHLPIGAVIEI 407 >gi|121603898|ref|YP_981227.1| endonuclease/exonuclease/phosphatase [Polaromonas naphthalenivorans CJ2] gi|120592867|gb|ABM36306.1| Endonuclease/exonuclease/phosphatase [Polaromonas naphthalenivorans CJ2] Length = 375 Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 22/57 (38%), Gaps = 17/57 (29%) Query: 224 DHIMLSPEATSLLHSARIDTK-----------------PRGWTKPSDHTPVIVSLDI 263 D+I+LSP + +A ++ + R SDH V V LDI Sbjct: 319 DYILLSPGLFDKVKAAGVERRGMWGGTNGTLWPHFKEVTRAEEAASDHAAVWVELDI 375 >gi|289663955|ref|ZP_06485536.1| endonuclease/exonuclease/phosphatase family protein [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289667545|ref|ZP_06488620.1| endonuclease/exonuclease/phosphatase family protein [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 288 Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 34/276 (12%), Positives = 65/276 (23%), Gaps = 32/276 (11%) Query: 2 SVVTVATWNVNSIRA------------RIHNLAAWIKENNPDIICLQETKTEDKNFPFET 49 S + V ++NV R R ++ A IK+ +PD+ QE E + Sbjct: 33 SPLRVMSFNV---RVPVDRDGDKRWAVRRTSMVALIKQTHPDVFGTQELVQEQAQYLASH 89 Query: 50 LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 L + + + + V L ++ + Sbjct: 90 LPAYRWFGKGRRADGSEEHMGVFYDSNALSVIESGDFWLSETPEVPGSSSWNTDLPRMVT 149 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 + R + + + +P + Sbjct: 150 WALFERRSDKRRFYL----LNTHLPHRDQDEAAREQGARVILSRIATLPADIPVVVTGDF 205 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 +D + + T ++ RID I+ Sbjct: 206 NSDPDQGTYRTLTAVLGDARAHVAKPQGPEKTFQDFTTQPTR----------RIDWILF- 254 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 T G PSDH PV+ + P+ Sbjct: 255 RGLTP--TRFSTLDMRPGGILPSDHYPVLAEFEWPQ 288 >gi|253571354|ref|ZP_04848761.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|251839307|gb|EES67391.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] Length = 315 Score = 52.1 bits (123), Expect = 8e-05, Method: Composition-based stats. Identities = 42/292 (14%), Positives = 78/292 (26%), Gaps = 45/292 (15%) Query: 4 VTVATWNV-----------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52 +TVA++N+ + R +A ++ ++ DI QE E L Sbjct: 27 LTVASYNLRNANGSDSARGDGWGQRYPVIAQIVQYHDFDIFGTQECFLHQLKDMKEALPG 86 Query: 53 LNY-HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 +Y + K + + + L + + Sbjct: 87 YDYIGVGRDDGKDKGEHSAIFYRTDKFDIVEKGDFWLSETPDVPSKGWDAVLPRICSWGH 146 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 + ++ + I + R S L E+ N+ N Sbjct: 147 FKCKDTSFEFLFFNLHMDHIGKKARVESAFLVQEKMKELGRGKNLP------AILTGDFN 200 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 K + + + ++ +D +S+++ RIDHI +SP Sbjct: 201 VDQTHQSYDAFVSKGVLCDSYEKCDYRYALNGTFNNFD--PNSFTE---SRIDHIFVSPS 255 Query: 232 A--------------------TSLLHSA--RIDTKPRGWTKPSDHTPVIVSL 261 + I K PSDH PV V L Sbjct: 256 FHVKRYGVLTDTYRSVRENSKKEEVRDCPEEITIKAYEARTPSDHFPVKVEL 307 >gi|327270084|ref|XP_003219821.1| PREDICTED: tyrosyl-DNA phosphodiesterase 2-like [Anolis carolinensis] Length = 366 Score = 52.1 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 39/280 (13%), Positives = 79/280 (28%), Gaps = 49/280 (17%) Query: 2 SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 S +++ TWN++ + RAR + ++I +PD++ LQE P L Sbjct: 116 STLSLITWNIDGLDLKNLPERAR--GVCSYIALYSPDVVFLQEV------IPP-LFDYLQ 166 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 + N A + I+ + T ++ L + Sbjct: 167 KRAVSYTIIPGNTDAYFTA-----IMLKKSRVKIIKHEIIRFPTTSMMRNLLAVHATVFG 221 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 + ++ + + L L + +I+ D Sbjct: 222 NELCFMTSHLESTKDHGEERLNQLKMVL-------------AKMKEVPESTTVIFGGDTN 268 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF-WDYYADSWSK-NKGIRIDHIMLSPEA 232 + L N H Y++ + ++ N +R D + Sbjct: 269 LRDKEVAKIGGLPNNILDIWEFLGKPEHCKYTWDTSQNTNLEARYNCKMRFDRLF----L 324 Query: 233 TSLLHSARIDT---KPRGWTK------PSDHTPVIVSLDI 263 + +I G K PSDH + + D+ Sbjct: 325 RAASAGGQIIPQSLDLIGLEKLDCGRFPSDHWGLFCNFDV 364 >gi|220921344|ref|YP_002496645.1| endonuclease/exonuclease/phosphatase [Methylobacterium nodulans ORS 2060] gi|219945950|gb|ACL56342.1| Endonuclease/exonuclease/phosphatase [Methylobacterium nodulans ORS 2060] Length = 279 Score = 52.1 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 39/281 (13%), Positives = 74/281 (26%), Gaps = 47/281 (16%) Query: 2 SVVTVATWNVN---SIRARIH--NLAAWIKENNPDIICLQETKT---------EDKNFPF 47 V+ + T+NV I R+ +A + PD++ LQE + Sbjct: 19 RVLRLITYNVRRCLGIDGRLSPVRIAEVLASCRPDVVALQELDVGRMRSGMVDQAHAIAQ 78 Query: 48 ETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107 ++H + G AIL+ + +E + Sbjct: 79 HLGMRAHFHAALRVMEEEYGNAILTALPSRLV--RAEALPGLPDRPHLEPRGALWAAITA 136 Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167 + + + P++ GD N +P Sbjct: 137 HDTEIQVIATHLGLRRRERARQAEALLGSRFLSDPACRPPVVLVGDLNAVPHSFAYRRLA 196 Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227 +DA + + + + +R+DH+ Sbjct: 197 GRLSDAQRAPGMPRRQRTYPSACPL----------------------------LRLDHVF 228 Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268 +S T R SDH P++V L++ PR Sbjct: 229 VSEGVTVRRVEVVRGPLAR---IASDHLPLLVDLEVAGPRP 266 >gi|320160210|ref|YP_004173434.1| hypothetical protein ANT_08000 [Anaerolinea thermophila UNI-1] gi|319994063|dbj|BAJ62834.1| hypothetical protein ANT_08000 [Anaerolinea thermophila UNI-1] Length = 242 Score = 52.1 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 30/258 (11%), Positives = 65/258 (25%), Gaps = 25/258 (9%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + TWN + PD+ +QE ++ + + N T Sbjct: 1 MKLVTWNCQG---AFRRKYPALAALQPDLAVVQEC----ESLERISWKQGNAPTHTFWYG 53 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 + G D + + + + Sbjct: 54 EKPTRGVGIFSWTQTSFRVKEGFDTSIHYAIPVEVEAPIPFHVIAVWTMKHADWRLAYSG 113 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + + R ++ + L F + P+ + Sbjct: 114 QAYRALGVYREFILSADTVILG---DFNSNQRTAPR-------------GRVGSHAVLAA 157 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + AT + + ++ ++ G ID++ + L S ++ Sbjct: 158 NLHTLGLISAYHFATGEKSGNETHPTFFHGRKTEQAG-HIDYVFIPSRWIRRLKSVQV-G 215 Query: 244 KPRGWTKPSDHTPVIVSL 261 P W SDH PV+V Sbjct: 216 NPGEWLAYSDHCPVMVEF 233 >gi|302879657|ref|YP_003848221.1| Endonuclease/exonuclease/phosphatase [Gallionella capsiferriformans ES-2] gi|302582446|gb|ADL56457.1| Endonuclease/exonuclease/phosphatase [Gallionella capsiferriformans ES-2] Length = 249 Score = 52.1 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 40/269 (14%), Positives = 72/269 (26%), Gaps = 32/269 (11%) Query: 1 MSVVTVATWNV-------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 M +TVAT+N+ N R +H L + E N DI+ LQE E Sbjct: 1 MQTLTVATYNIHKGFSHFNG-RVVMHELRERLHELNADIVFLQEV-------QGEHTGHA 52 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 +++ ++ + + + + T I Sbjct: 53 G-RFANYPDGAHHEFIADRRWPHSAYGKNCVYEAGHHGNAILSRYPIVQTLNTDISAHRF 111 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + +FA + Y D Sbjct: 112 ESRGLL---------HCEIALPDGQRLHSLCAHFGLFARGRRAQTRALIEYVQHEIPPDV 162 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI-RIDHIMLSPEA 232 + + + Q + HD L+ A S+ + R+D I + Sbjct: 163 QVIIAGDFNDWRNQMGAVIASELGMHDVFQLHG--GRVARSFPARLPLFRLDRIYM-RGF 219 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 T + A + W + SDH + +L Sbjct: 220 T--VAQAEVHAGG-AWQRLSDHAAISATL 245 >gi|164657067|ref|XP_001729660.1| hypothetical protein MGL_3204 [Malassezia globosa CBS 7966] gi|159103553|gb|EDP42446.1| hypothetical protein MGL_3204 [Malassezia globosa CBS 7966] Length = 63 Score = 52.1 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 10/63 (15%) Query: 4 VTVATWNVNSIRARIH------NLAAW---IKENNPDIICLQETKTEDKNFPFETLQSLN 54 + + WNVN +R + L +W +KE + DI C QE K K + + Sbjct: 1 MRIVCWNVNGLRT-LKSYAPWYGLPSWEACLKELHADIACFQEVKMTRKQLTYAMCVMDD 59 Query: 55 YHI 57 Y Sbjct: 60 YEA 62 >gi|154491892|ref|ZP_02031518.1| hypothetical protein PARMER_01519 [Parabacteroides merdae ATCC 43184] gi|154088133|gb|EDN87178.1| hypothetical protein PARMER_01519 [Parabacteroides merdae ATCC 43184] Length = 373 Score = 52.1 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 42/289 (14%), Positives = 73/289 (25%), Gaps = 47/289 (16%) Query: 2 SVVTVATWNVNSIRARIHN--------LAAWIKENNPDIICLQETKT-EDKNFP-----F 47 +V+ V T+NV + +I + DI+CLQE KNF Sbjct: 105 NVLKVLTYNVMGFG--YKGHTEDAPNPIIRYIANSGADIVCLQEYAVGTSKNFLTNQKIA 162 Query: 48 ETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107 L+ Y S ++ + I I + L Sbjct: 163 NALKMYRYRSIIPIGTSGTLKFNIAVFSKYPISKSRKIKYDSSFNGSSIHELDIRGKKLT 222 Query: 108 IGNLYLPHGNPITSTKYDDKISWIK-----------RFLRFASQRLELEEPLIFAGDYNI 156 + N +L + + + A I Sbjct: 223 LINNHLESFKLTMEDRSHYSAFIKNLNSETLDGLRSSIEQKLGPAFRIRARQARAVAEEI 282 Query: 157 IPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS 216 D ND + R L++ + + ++ Sbjct: 283 KKIDTDYVLVCGDFNDTPISYAHRTIQGPLKDAYAASGRGVGVTYNENFFWF-------- 334 Query: 217 KNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 RID+I+ S + +D + SDH P+ L + E Sbjct: 335 -----RIDNILHSANMKP--INCTVDK-----VRYSDHYPLWCYLQLKE 371 >gi|74007488|ref|XP_848398.1| PREDICTED: similar to LINE-1 reverse transcriptase homolog [Canis familiaris] Length = 1025 Score = 52.1 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 26/110 (23%), Positives = 41/110 (37%), Gaps = 12/110 (10%) Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 + E R L M FTD R H Y+F+ ++S RIDHI+ Sbjct: 371 KQNISKETRALNDTLDQMDFTDIYRTLHPNSTEYTFFSSAHGTFS-----RIDHILGHKS 425 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 + RI SDH + + L+ +K + S + ++ I Sbjct: 426 GLNRYQKIRIVPCI-----FSDHNALKLELN--HNKKFGRTSNTWRLRTI 468 >gi|242058129|ref|XP_002458210.1| hypothetical protein SORBIDRAFT_03g029010 [Sorghum bicolor] gi|241930185|gb|EES03330.1| hypothetical protein SORBIDRAFT_03g029010 [Sorghum bicolor] Length = 1150 Score = 52.1 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 37/271 (13%), Positives = 72/271 (26%), Gaps = 56/271 (20%) Query: 4 VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++V WNV + A + + + P I+CLQETK Sbjct: 874 LSVLCWNVRGLNDAAHRELVRETVACSRPTIVCLQETKIS-------------------H 914 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 K+ + + G + + + +I+ R+ + P +S Sbjct: 915 IKTNLVTQTVGQQLNTYAELGAQGTRGGILLAWNKDMISISNPVSRVFTISATVSVPSSS 974 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 T + + L A P P + N + Sbjct: 975 TSFLLTTCYGPADDGRKEDFL--------AELLECNPGPQSPWLIAGDFNLIYQADDKNN 1026 Query: 182 SFQKLQNMGFTDAIRATHD------THHLYSFWDYYADSWSKNKGIRIDHIMLS------ 229 + MG + + Y++ ++ S +R+D + + Sbjct: 1027 LNLNRRMMGKFRRALDDCELFELTLQNRRYTW----SNERSNPTLVRLDRVFCNAEWEVS 1082 Query: 230 -PEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 P S SDH P+ + Sbjct: 1083 FPNFALSALSTG----------ASDHCPLFL 1103 >gi|147865117|emb|CAN84100.1| hypothetical protein VITISV_012063 [Vitis vinifera] Length = 1282 Score = 52.1 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 34/251 (13%), Positives = 72/251 (28%), Gaps = 29/251 (11%) Query: 4 VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 V + WNV ++ + +I+ D+IC+QETK + +SL Sbjct: 517 VKILXWNVRGANDSSKKKVIKTFIRNQRVDLICIQETKIQ--XMSDSIARSLGSGRFLDW 574 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 + A + + D + Q + + + + + Sbjct: 575 KAVNAEGASGGILICWDRRSLDIXDWEEGQFTLSCRFRNVENGAIWVFTGVYGPFSKVER 634 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + F + R E+P GD+NI P + + + Sbjct: 635 DAL---------WEEFGAIRGLWEDPWCLGGDFNITLFPRERSSQRR----------ISS 675 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSAR 240 + +K + + +++ + N+ R+D ++SP Sbjct: 676 AMRKFAEIVDDLGLVDLPLHGGEFTW-----NGGQNNQAWARLDRFLMSPSWIDQFSGIN 730 Query: 241 IDTKPRGWTKP 251 PR Sbjct: 731 QCRLPRPEXHW 741 >gi|329955242|ref|ZP_08296199.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides clarus YIT 12056] gi|328526241|gb|EGF53260.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides clarus YIT 12056] Length = 370 Score = 52.1 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 48/270 (17%), Positives = 94/270 (34%), Gaps = 33/270 (12%) Query: 4 VTVATWNV----NSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57 +TVAT+NV N I + +A ++++ + D++C QE +K+F ++L+ H Sbjct: 114 LTVATYNVHNFGNEITGYSC-KEIARYMRQQHVDVLCFQEF-GGNKHFTADSLRRALSHW 171 Query: 58 ETCGQKSYNGVAI---LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 + + + + ++ + + + T T+R+ N +L Sbjct: 172 QYALIPADDSIRGLLPIAVFSRYPLTGGRFITYPHSSNCSMLCDIVAGTDTIRLLNNHLQ 231 Query: 115 HGNPITSTKYDD------KISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168 + K + + ++ A++ L A +I +P++ Sbjct: 232 TTGVSRNRKKWERELTTDNTRREAQAVQDAAETLHENFVKRAAQTDSICHLAIAAPHPVL 291 Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 D + GF + T ++Y+ Y +RID+ Sbjct: 292 VCGDFNSLPSSYTYRRLS---GFLEDGFKTGGHGYMYT---YRYGKRM----LRIDYAFH 341 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVI 258 SPE ID SDH PVI Sbjct: 342 SPELEC------IDYYSPDLDLCSDHNPVI 365 >gi|306844277|ref|ZP_07476869.1| Endonuclease/exonuclease/phosphatase family protein [Brucella sp. BO1] gi|306275349|gb|EFM57090.1| Endonuclease/exonuclease/phosphatase family protein [Brucella sp. BO1] Length = 369 Score = 52.1 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 41/309 (13%), Positives = 77/309 (24%), Gaps = 75/309 (24%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQ--------SLNYHIETCGQKSYNGVAILSKYQP 76 I E DI+CLQE D + Y + + + ++ Sbjct: 65 IAETRADILCLQEV---DNLAALNAFEYGYLFKMIGYGYRHKYLIDGNDSRGIDVAVMMR 121 Query: 77 IEIVTHLPG------------------------------DDLDVQARFIEATFTINTQTL 106 P D + + I + L Sbjct: 122 DTTRDGQPIEVDEVTSHAHLTYSDFGLYQPELAELGIEPHDRIFKRDCLNVDLRIGGEPL 181 Query: 107 RIGNLYLPHGNPI----------TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI 156 + +L + + + + + E + GD+N Sbjct: 182 SLFVAHLKSMSGARNGLDGRTSSHPVRLAEARAIRRIIEEKFGIDRVAERRWLICGDFND 241 Query: 157 IPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS 216 + + +E + L GF + ++ + Sbjct: 242 YRERILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDRWTLYHTRGPLER 301 Query: 217 KNKGIRIDHIMLSPEATSLLHSA-------------------RIDTKPR-GWTKP--SDH 254 ++D+IM SP + +D PR GW +P SDH Sbjct: 302 --HLCQLDYIMASPAFAAKNEHVVPDIIRRGQPWRTIFPPEQNVDRYPRTGWDRPKASDH 359 Query: 255 TPVIVSLDI 263 PV V+L++ Sbjct: 360 CPVSVTLNM 368 >gi|163938364|ref|YP_001643248.1| endonuclease/exonuclease/phosphatase [Bacillus weihenstephanensis KBAB4] gi|163860561|gb|ABY41620.1| Endonuclease/exonuclease/phosphatase [Bacillus weihenstephanensis KBAB4] Length = 263 Score = 52.1 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 34/271 (12%), Positives = 66/271 (24%), Gaps = 19/271 (7%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET--KTEDKNFP----FETLQS 52 + + T N +S + +I LA I+E + D+I LQE + +N + Sbjct: 1 MKLLTLNCHSWQEENQIEKIKYLAKAIQEEDYDVIALQEVSQSIQAENVCGNKKKDNFGL 60 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 L + + ++ + F + Sbjct: 61 LLLEELRALNVKEYNIIWDFSHIGYDVYEEGLAIITKHNIVKEDTFFVSENKDTTYWKTR 120 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 I + + ++ N + Sbjct: 121 KIVSATIAYNDKNITFYSCHLGWWNDEEESFKDQVDRLMERVNSNELSFLMGDFNNNARL 180 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 E + WD + +RID I+ + Sbjct: 181 EGEGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWD------ENKQNLRIDLILSNQS- 233 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 ++S+++ SDH V V LDI Sbjct: 234 -KTVNSSKVIFNGTNRNVISDHFGVEVQLDI 263 >gi|227822472|ref|YP_002826444.1| hypothetical protein NGR_c19280 [Sinorhizobium fredii NGR234] gi|227341473|gb|ACP25691.1| hypothetical protein NGR_c19280 [Sinorhizobium fredii NGR234] Length = 368 Score = 52.1 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 41/308 (13%), Positives = 85/308 (27%), Gaps = 74/308 (24%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQ--------SLNYHIETCGQKSYNGVAILSKYQP 76 I + + DI+CLQE D + + Y + + + + ++ Sbjct: 66 IADCDADILCLQE---ADNMAALQAFEYGYLFRMVGNGYRQKYLIEGNDSRGIDVAVLMR 122 Query: 77 IEIVTHLPGDDL-----------------------------DVQARFIEATFTINTQTLR 107 E + L + +E I + L Sbjct: 123 EETRDGQRIECLEVKSHATLTYEDLDLFNEELALTNRPRDRIFKRDCLEVDLRIGGRPLT 182 Query: 108 IGNLYLPHGNPITSTKYDDKISWIKR----------FLRFASQRLELEEPLIFAGDYNII 157 + ++ P + + R + ++ GD N Sbjct: 183 LYVVHFKSMGPARDGLDGRRATMALRAAEAKAVRHVIESRFGRGHTADKMFAICGDMNDY 242 Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK 217 + + E + L + GF + + ++ + + Sbjct: 243 QEKVVILGDRRNGYEFVPHEEEVSALDILSHDGFVENPMSRRPVLDRWTLFHSRGP--EE 300 Query: 218 NKGIRIDHIMLSPEATSL-------LHSA------------RIDTKPR-GWTKP--SDHT 255 ++D+I LSP + A ++ PR GW +P SDH Sbjct: 301 RHLCQLDYIWLSPALARRNSSRVPEIVRAGQPYRTIFPAGQEVERYPRTGWDRPKASDHC 360 Query: 256 PVIVSLDI 263 P++++LDI Sbjct: 361 PLVMTLDI 368 >gi|134291232|ref|YP_001115001.1| endonuclease/exonuclease/phosphatase [Burkholderia vietnamiensis G4] gi|134134421|gb|ABO58746.1| Endonuclease/exonuclease/phosphatase [Burkholderia vietnamiensis G4] Length = 263 Score = 52.1 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 29/263 (11%), Positives = 66/263 (25%), Gaps = 49/263 (18%) Query: 4 VTVATWNVNS------IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57 + +AT+N++ RA + + A I+E + D+I LQE L Sbjct: 29 LRIATYNIHGGYGAWPARA-VERIVAVIRELDADVIALQEV-------------PLG--- 71 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 + + G L + Sbjct: 72 ------------GTRAPDVLAHLRDATGMHAAAGPTIDTPERRYGNAVLSRCPIRAARTL 119 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 ++ + + + + A + L + + Sbjct: 120 DLSFHQREPRGALDADIDCSAGPIRVVATHLGLSANERSAQVQRLLAAFDTGAMPVILMG 179 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLY-SFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 ++ + F + + + + + W ++ +D I + P LL Sbjct: 180 DINEWFVRGRALQALTTRFRRAPAPRTFPTAWPVFS----------LDRIWIHPG--ELL 227 Query: 237 HSARIDTKPRGWTKPSDHTPVIV 259 + SDH P++ Sbjct: 228 VDVAVHRS-MLARHASDHYPLVA 249 >gi|308805699|ref|XP_003080161.1| unnamed protein product [Ostreococcus tauri] gi|116058621|emb|CAL54328.1| unnamed protein product [Ostreococcus tauri] Length = 356 Score = 52.1 bits (123), Expect = 9e-05, Method: Composition-based stats. Identities = 40/299 (13%), Positives = 73/299 (24%), Gaps = 46/299 (15%) Query: 3 VVTVATWNVN----------SIRA-----RIHNLAAWIK-ENNPDIICLQETKTEDKNFP 46 + V +WN+ RA + I D++CLQE + Sbjct: 48 TLRVMSWNLQLLAGPFSGQGGFRADLIKRARKIVQNIIVVAETVDVVCLQEVW---DDAS 104 Query: 47 FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 L+S ++ + + H ++T L Sbjct: 105 RTVLRSGLATTFPYIFSPAAKCGLMVCSKASHVCNHFVKFTHRGGIEARAFEKGVSTTYL 164 Query: 107 RIGNL-YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165 R+ I +T R RF+ E + + + Sbjct: 165 RLAQNDACVRVAIILNTHLQSDYWCSGRVARFSQLVCVRESFMRAVRECRGNGYVVERVL 224 Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHH-LYSFWDYYADSWSKNKGI--- 221 N + E + +D +F + G Sbjct: 225 LAGDINVEHGSAEYEHMMHSIFPGAIDLMNSPLNDDDSFRLTFPVARWRHYILKCGRESR 284 Query: 222 --------RIDHIM------LSPEATSL---LHSARID----TKPRGWTKPSDHTPVIV 259 RID++M +S + S ++ RG SDH P++ Sbjct: 285 YFDLEPRVRIDYVMDLTPMGVSQGVPPRHKHVDSGYVNRALCRDARGRA-LSDHFPIVA 342 >gi|255322370|ref|ZP_05363516.1| putative endonuclease/exonuclease/phosphatase [Campylobacter showae RM3277] gi|255300743|gb|EET80014.1| putative endonuclease/exonuclease/phosphatase [Campylobacter showae RM3277] Length = 445 Score = 52.1 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 45/256 (17%), Positives = 83/256 (32%), Gaps = 45/256 (17%) Query: 16 ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75 A+ ++A IKE N DII LQE E++ E ++ Y + V + + Sbjct: 64 AKFKAVSAKIKELNADIIALQEI--ENEMILKELMKDAGYKYFAFSKDKNGPVGLAVLSR 121 Query: 76 PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135 T + ++ F ++ Q + NL+ P Sbjct: 122 IKPEKTQIFSVPNVKTRDILKLDFEVDGQKFSLLNLHFP--------------------- 160 Query: 136 RFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAI 195 +++ L++ + + N E+ +N+ Sbjct: 161 ---ARKNPLKQRKTAFITLKSTLIDAEKVVVLGDFNTPYGDKELLGDLATSKNLANLWVF 217 Query: 196 RATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL---LHSARIDTKPRGWTKPS 252 H YS A +DH++LS +A S L+S +I R + S Sbjct: 218 L---PKHERYSHTSLNA----------LDHVLLSKDALSQNYVLNSFKI---ERDGAQIS 261 Query: 253 DHTPVIVSLDIPEPRK 268 DH ++ L+ + K Sbjct: 262 DHFALVFRLNFDKNAK 277 >gi|147827067|emb|CAN66461.1| hypothetical protein VITISV_035843 [Vitis vinifera] Length = 734 Score = 52.1 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 11/116 (9%), Positives = 38/116 (32%), Gaps = 6/116 (5%) Query: 4 VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTED--KNFPFETLQSLNYHIET 59 + + +WNV ++ + ++++ D+IC+QETK + + I+ Sbjct: 514 LKILSWNVRGANESSKRKIIKNYVRDQRVDLICIQETKIQAMSEGIVRSL--GTGRFIDW 571 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + + + + ++ + + + + + + Sbjct: 572 RALNAEGATGGVYGPFTKVAKEGMWEEFGAIRGLWDDPWCLGGDFNITLFQREMSN 627 Score = 45.2 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 11/61 (18%), Positives = 23/61 (37%), Gaps = 9/61 (14%) Query: 201 THHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 +++ + N+ R+D ++SP T+ R SDH P+++ Sbjct: 653 QGGEFTW-----NGGLNNQAWARLDRFLVSPSWLDQFSGV---TQSRLSRPISDHFPIVL 704 Query: 260 S 260 Sbjct: 705 E 705 >gi|239832253|ref|ZP_04680582.1| endonuclease/exonuclease/phosphatase [Ochrobactrum intermedium LMG 3301] gi|239824520|gb|EEQ96088.1| endonuclease/exonuclease/phosphatase [Ochrobactrum intermedium LMG 3301] Length = 403 Score = 52.1 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 44/306 (14%), Positives = 78/306 (25%), Gaps = 69/306 (22%) Query: 25 IKENNPDIICLQET---------------KT----------------------------- 40 I E DI+CLQE K Sbjct: 99 IAETRADILCLQEVDNLAALNAFEYGYLFKMIGHGFRHKYLIDGNDSRGIDVAVMMRDTT 158 Query: 41 EDKN-FPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF 99 D + + S Y + L I + A + F Sbjct: 159 RDGQPIEVDEVTSYAYVTYNDFGLYEPALGELGLEAHDRIFKRDCLNVDIRIAGKPLSLF 218 Query: 100 TINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159 + +++ + + + + + + GD+N + Sbjct: 219 VTHLKSMTGARNGFDGRTSSLPVRRAEARAIRRIIEDKFGPSNVADRRWLICGDFNDYRE 278 Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK 219 + +E + L GF + ++ Y+ + Sbjct: 279 RIIIGGDEWNGYEFTPMVEEESALDVLLGDGFAVNLVERRPVMDRWTL--YHTRGPQERH 336 Query: 220 GIRIDHIMLSPEATSLLHSA-------------------RIDTKPR-GWTKP--SDHTPV 257 ++D+IM SP A +ID PR GW +P SDH PV Sbjct: 337 LCQLDYIMASPSFAKKNERAVPNIVRRGQPWRTIFPPGQQIDRYPRTGWDRPKASDHCPV 396 Query: 258 IVSLDI 263 V+L++ Sbjct: 397 AVTLNM 402 >gi|170739229|ref|YP_001767884.1| endonuclease/exonuclease/phosphatase [Methylobacterium sp. 4-46] gi|168193503|gb|ACA15450.1| Endonuclease/exonuclease/phosphatase [Methylobacterium sp. 4-46] Length = 257 Score = 52.1 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 4/55 (7%) Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI-PEPRKKQQDST 274 +R+DH+ +S + + P SDH P++V LD+ P + D Sbjct: 203 LRLDHVFVSEGI--RVRHVEVVRGPLARV-ASDHLPLLVDLDLAPAAGAPRPDRA 254 Score = 39.0 bits (89), Expect = 0.78, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 20/44 (45%), Gaps = 11/44 (25%) Query: 3 VVTVATWNVNSIRARIH--------NLAAWIKENNPDIICLQET 38 ++ + T+NV R + +AA + PD++ LQE Sbjct: 1 MLRLITYNV---RRCLGTDGTLSPARIAAVLASCRPDVVALQEL 41 >gi|147845934|emb|CAN79905.1| hypothetical protein VITISV_022123 [Vitis vinifera] Length = 1420 Score = 52.1 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 11/41 (26%), Positives = 23/41 (56%), Gaps = 2/41 (4%) Query: 3 VVTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTE 41 ++ + +WNV ++ + A I+ D++C+QETK + Sbjct: 710 MLRLVSWNVRGANDSSKRKVIKAMIRSQRADLVCIQETKIQ 750 >gi|29290093|gb|AAO67564.1| Pol protein [Drosophila virilis] Length = 1531 Score = 52.1 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 41/283 (14%), Positives = 83/283 (29%), Gaps = 39/283 (13%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNF-PFETLQSLNYHIETC 60 + +A WN +R +++ L ++ + DI+ L E + P + YH Sbjct: 49 NSFKIAYWNAAGVRNKLNELEVFMNRHKIDIMMLVELRLGPSALNPGPPITINGYHTYAA 108 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + + + H+ + + ++ + I + Sbjct: 109 TRPPPHHRCGGVATLVKHGIKHIALEAIVFESMQSAPVAVTLAKNETIVLAPI------- 161 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 S F I GD+N W + Sbjct: 162 YCPPQYNWSADMFAKLFQHFEKLSGSGFILCGDWNAKH---------SWWGNQRACRRGV 212 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA--TSLLHS 238 + + + + + + TH Y+ S+N+ ID I + T L Sbjct: 213 ELLRSIHSNKKLNILATGGATHFPYT---------SRNRPSAID-IAVYRALTMTGLQTH 262 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 + ID + SDH P+ + L + + T+ + PI Sbjct: 263 STIDLE-------SDHLPIHIGLRV---GRFPYKQTTMRLLPI 295 >gi|312087189|ref|XP_003145373.1| hypothetical protein LOAG_09798 [Loa loa] gi|307759462|gb|EFO18696.1| hypothetical protein LOAG_09798 [Loa loa] Length = 293 Score = 52.1 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 46/302 (15%), Positives = 84/302 (27%), Gaps = 52/302 (17%) Query: 4 VTVATW----NV-NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN-YHI 57 +T TW NV N + + IK NPD++ LQE D + + + Sbjct: 1 MTFNTWLTGNNVENGLAKIAKH----IKRINPDVVALQEI--NDIKRLQHLITEMGKGWV 54 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 SY AIL+K++ I H + V+ TIN +L + Sbjct: 55 TAKSTYSYTDTAILTKHKLINRSFHQVSHGMGVKIEIENTNRTINIWSLHLDYQSYGPYA 114 Query: 118 PITST------------------KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159 + + + + + A + +E ++ + Sbjct: 115 AFNKMVTKASQIMAGEIVDGKGRFQNMRELLVDDYFQAAIENSSIEPLIVCGDFNSPSHL 174 Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF----------WD 209 + + + + + ++ W Sbjct: 175 DWTNQTSFLHGDWKFQWPATHMLQNEAGMKDSYRELHPQVLDNPGITWSTVEKMTSSGWS 234 Query: 210 YYADSWSKNKGIRIDHIMLSPEATSLLHS------ARIDTKPRGW--TKPSDHTPVIVSL 261 + RID+I S + S + KP W PSDH VI + Sbjct: 235 WTIPEPQD----RIDYIFYRGSLLSPIQSYTYQGNVTVYPKPFHWKNDYPSDHFAVITTF 290 Query: 262 DI 263 + Sbjct: 291 RL 292 >gi|284992104|ref|YP_003410658.1| endonuclease/exonuclease/phosphatase [Geodermatophilus obscurus DSM 43160] gi|284065349|gb|ADB76287.1| Endonuclease/exonuclease/phosphatase [Geodermatophilus obscurus DSM 43160] Length = 322 Score = 52.1 bits (123), Expect = 1e-04, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 24/68 (35%), Gaps = 13/68 (19%) Query: 209 DYYADSWSKNKGIRIDHIMLSPEATSLLHSARI-------------DTKPRGWTKPSDHT 255 D + +G IDHI++S + + D R SDH Sbjct: 255 DQRFSRRYRGRGELIDHILVSHALVHSVADGDVRTDGAGPTPSIEDDPSRREDAPGSDHR 314 Query: 256 PVIVSLDI 263 PV+ +D+ Sbjct: 315 PVVAQIDV 322 >gi|312868313|ref|ZP_07728513.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus parasanguinis F0405] gi|311096058|gb|EFQ54302.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus parasanguinis F0405] Length = 270 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 33/272 (12%), Positives = 71/272 (26%), Gaps = 14/272 (5%) Query: 4 VTVATWNVNS-----IRARIHNLAAWIKENNPDIICLQETK--TEDKNFPFETLQSLNYH 56 + T N +S ++ + L I E D+IC QE + + Sbjct: 1 MKFLTLNSHSWMEENVQQKFETLKEQILEAKYDVICFQEVNQEMSSEAVETDEFYQALPS 60 Query: 57 IETCGQKSYNGVAILS-----KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 + + V + + + G D + I + + + + N+ Sbjct: 61 AVAIHKDHFVRVLVEELAAQGLHYYWTWAYNHIGYDHLNEGVAILSRQPLKADEILVSNM 120 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 P K + ++ F I+ + Sbjct: 121 DDPTDYHTRRVAVAHTSVDGKEIAVASVHLSWWDKGFQFEWPRIEKYFSQVGKPFILAGD 180 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 + + D+ +T Y+ +RID++ SPE Sbjct: 181 FNNPAGQEGYETILSSPLELQDSFIEAKETKGTYTVGPGIDGWTDNQVPLRIDYVFASPE 240 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + + + + SDH + L + Sbjct: 241 WD--IQRLHVIFDGQNKSHVSDHYGLEAELSL 270 >gi|188990144|ref|YP_001902154.1| hypothetical protein xccb100_0749 [Xanthomonas campestris pv. campestris str. B100] gi|167731904|emb|CAP50088.1| putative exported protein [Xanthomonas campestris pv. campestris] Length = 288 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 35/274 (12%), Positives = 70/274 (25%), Gaps = 34/274 (12%) Query: 4 VTVATWNVNSIR------------ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51 + V ++NV R AR + + IK+ +PD+ QE +E + L Sbjct: 35 LRVMSFNV---RVPVDTDGDKRWQARRGAMVSVIKQTHPDVFGTQELVSEQAGYLTAQLP 91 Query: 52 SLNYHIETCGQKSYNGVA-ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 + + + + + + + +V D T+ + Sbjct: 92 NYRWFGQGRRGDDSDEHMGVFYDTRALNVVESGNFWLSDTPEVAGSITWGNVLPRMVTWA 151 Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170 L+ + ++ + + + +P + Sbjct: 152 LFERRSDKRRFYLFNTHFPYRDEDEPARERSAR-----LILSRIAQLPADIPVVLTGDFN 206 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230 +D + +T +S RID I+ Sbjct: 207 SDPDKITYPTLTAVLGDARAKAPKRSGPENTFQDFSTHPTR----------RIDWILF-R 255 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 T G PSDH PV+ P Sbjct: 256 GLTP--TQFTTLDDRPGGVLPSDHYPVLAEFAWP 287 >gi|303238818|ref|ZP_07325350.1| Endonuclease/exonuclease/phosphatase [Acetivibrio cellulolyticus CD2] gi|302593697|gb|EFL63413.1| Endonuclease/exonuclease/phosphatase [Acetivibrio cellulolyticus CD2] Length = 616 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 36/265 (13%), Positives = 71/265 (26%), Gaps = 52/265 (19%) Query: 4 VTVATWNV---NSIRARIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYHIET 59 + + +NV N N +I + +PDI+ L E K+ + + Y + Sbjct: 115 LKIVHFNVLTSNG---EYKNAIEYIDKKDPDIVVLNEVNKSWIDKL--KLFEKYKYSVV- 168 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 ++ + ++ Y IE+ D A F + + I + + Sbjct: 169 ---ETRDDNFGIALYSKIELQNARIEYFGDDGLPSAVAEFNVGDNEVSILGTHPLTPSDK 225 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 IS+ R +F S + + Y Sbjct: 226 --------ISFNSRNKQFESLIENRNSFSKSMVLFGDLNTTSWSYGFKNLVKGMNLYDSR 277 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + + + +DH ++S + Sbjct: 278 QGHGIQFSWPTTIPILSVP------------------------LDHCLVSKDIK------ 307 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIP 264 + + G SDH P+ V L I Sbjct: 308 -VLKREMGPNLGSDHRPLYVELRIS 331 >gi|229194746|ref|ZP_04321537.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus m1293] gi|228588757|gb|EEK46784.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus m1293] Length = 263 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 33/271 (12%), Positives = 61/271 (22%), Gaps = 19/271 (7%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET------KTEDKNFPFETLQS 52 + + T N +S + +I LA I+E D+I LQE K N + Sbjct: 1 MKLLTLNCHSWQEENQIEKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGL 60 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 L + + ++ + F + Sbjct: 61 LLLEELKALHVKDYNITWDFSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTAYWKTR 120 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 I + + + + + Sbjct: 121 KIVSATIAYNGKNITFYSCHLGWWNDEEESFKGQVNRLMEHVDSNELSFLMGDFNNNARL 180 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 E + WD +RID I+ + Sbjct: 181 QGEGYEYMMQKGLHDTYELAIEKDEGTTVQGEIAGWD------ENKHNLRIDLILCNRS- 233 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + S+++ SDH V V +DI Sbjct: 234 -EKVRSSKVIFNGTNRNIISDHFGVEVQVDI 263 >gi|120612279|ref|YP_971957.1| endonuclease/exonuclease/phosphatase [Acidovorax citrulli AAC00-1] gi|120590743|gb|ABM34183.1| Endonuclease/exonuclease/phosphatase [Acidovorax citrulli AAC00-1] Length = 252 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 40/282 (14%), Positives = 82/282 (29%), Gaps = 62/282 (21%) Query: 3 VVTVATWNVN----SI----RARIHNLAAWIKENNPDIICLQET-KTE---DKNFPF--- 47 ++ +AT+N++ + R IHNL +++ + DI+CLQE K ++FP Sbjct: 12 ILRIATYNIHKGVQGLGPARRLEIHNLGHAVEQLDADIVCLQEVRKVHRRGARHFPRWPE 71 Query: 48 ----ETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 E L Y + + G + + + Sbjct: 72 LPQAEFLAPEGYEAVYRTNAF---TRHGEHGNALLTRWPVIGHQHEDMSDHRFELRGLLH 128 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 + + + ++ +++ RF ++ + PL+ AGD+N Sbjct: 129 VEVEVQGRRVHAIVVHLGLIPGSRVRQVEQLQRFVAREVPPGAPLVVAGDFND------- 181 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223 ++ + A + Sbjct: 182 ------WGRQVKHALAAFGLREYEGEPRALTYPARLPLVQ-------------------L 216 Query: 224 DHIMLS--PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 DH+ + + RI W + SDH P+I + Sbjct: 217 DHVYVRGMEPMGLHVPRGRI------WWRMSDHLPLIAEFRL 252 >gi|291441116|ref|ZP_06580506.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] gi|291344011|gb|EFE70967.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] Length = 331 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 41/271 (15%), Positives = 78/271 (28%), Gaps = 30/271 (11%) Query: 6 VATWNV--------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFP--FETLQSLN- 54 V ++N+ +S R + ++ P +I QE +P + L Sbjct: 76 VMSFNLRFASAAEPHSWAVRRPVMRDLLRRERPHVIGTQE-----GLYPQLRDIEADLGP 130 Query: 55 -YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 Y G++ + + + + L D + + Sbjct: 131 AYDWIGTGREGGSRDEFTAVLYDTQRLVPLEYDHFWLSDTPDVIASNTWGNAFVRMATRV 190 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + + ++ ++ G P++ D Sbjct: 191 RFRDLRAGGREFHVLNTHLDNASQYARERAAALIADRVGGLG-------RCVPVVVTGDF 243 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY-SFWDYYADSWSKNKGIRIDHIMLSPEA 232 + L G D A + Y +F Y G RID I+++P Sbjct: 244 NVAAHENPVYDTLLGAGLVDTWEAAAERGEPYGTFHGYRP---PVPGGPRIDWILVTPGV 300 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 T +H A ++T PSDH PV +L + Sbjct: 301 T--VHRASVNTFAPAGRFPSDHLPVQAALTL 329 >gi|239932761|ref|ZP_04689714.1| hypothetical protein SghaA1_31348 [Streptomyces ghanaensis ATCC 14672] Length = 302 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 41/271 (15%), Positives = 78/271 (28%), Gaps = 30/271 (11%) Query: 6 VATWNV--------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFP--FETLQSLN- 54 V ++N+ +S R + ++ P +I QE +P + L Sbjct: 47 VMSFNLRFASAAEPHSWAVRRPVMRDLLRRERPHVIGTQE-----GLYPQLRDIEADLGP 101 Query: 55 -YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 Y G++ + + + + L D + + Sbjct: 102 AYDWIGTGREGGSRDEFTAVLYDTQRLVPLEYDHFWLSDTPDVIASNTWGNAFVRMATRV 161 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + + ++ ++ G P++ D Sbjct: 162 RFRDLRAGGREFHVLNTHLDNASQYARERAAALIADRVGGLG-------RCVPVVVTGDF 214 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY-SFWDYYADSWSKNKGIRIDHIMLSPEA 232 + L G D A + Y +F Y G RID I+++P Sbjct: 215 NVAAHENPVYDTLLGAGLVDTWEAAAERGEPYGTFHGYRP---PVPGGPRIDWILVTPGV 271 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 T +H A ++T PSDH PV +L + Sbjct: 272 T--VHRASVNTFAPAGRFPSDHLPVQAALTL 300 >gi|308470916|ref|XP_003097690.1| hypothetical protein CRE_14178 [Caenorhabditis remanei] gi|308239808|gb|EFO83760.1| hypothetical protein CRE_14178 [Caenorhabditis remanei] Length = 531 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 39/289 (13%), Positives = 82/289 (28%), Gaps = 43/289 (14%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENN---PDIICLQETKTEDKNFPFETLQSLNYHIETC 60 + + T+N S+ A + LA ++E N DII L ETK Sbjct: 21 LRICTFNCRSV-ATDNRLAELLEETNRIKYDIIGLSETK----------------RSAEV 63 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + +G ++ + V+ G + I + + L + Sbjct: 64 HMTNRDGTGVILGKRNDSSVSGGVGFIFNKSLMPKIKEIKIVSHRIGYITLQVNKNQCTI 123 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 Y + + + L + Y ++ + N+ Sbjct: 124 IQGYAPTADYEEEEHSNFYENL-EDVYKSCKSRYKMVIGDFNARIGERKGNEVFIGPHSM 182 Query: 181 Q---------SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 + + N F + TH +++ + +DHI+ + Sbjct: 183 EKRNDSGERLATFCEVNRVFHMNSQFIKPTHRRWTYISPDKQHRHE-----LDHILANG- 236 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 + + +T SDH + + I + K + + KP Sbjct: 237 --KYITDVSV---VPSFTNGSDHRMLRAKIHINAKQAKYEQV--KRRKP 278 >gi|301060638|ref|ZP_07201465.1| endonuclease/exonuclease/phosphatase family protein [delta proteobacterium NaphS2] gi|300445250|gb|EFK09188.1| endonuclease/exonuclease/phosphatase family protein [delta proteobacterium NaphS2] Length = 293 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 45/268 (16%), Positives = 89/268 (33%), Gaps = 32/268 (11%) Query: 2 SVVTVATWNVN---SIRARIHNLAAWIKENN-PDIICLQETKTEDKNFPFETLQSLNYHI 57 + ++V T+N+ R + N+ A ++ PD++ LQE + E +H+ Sbjct: 46 ASLSVMTYNIWDLGGKRPVLKNVEAVVRGAGIPDVLLLQEVRGEKMAASLAGSLGFPHHL 105 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 + GV+ILS+Y IE + AT + LR+ +++L + Sbjct: 106 YRAARGHGYGVSILSRYPLIESGFFYFK-SSKSGRGVLGATVVFEGRKLRLCSVHLDRID 164 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 I + +SW + L E + + + T+ Sbjct: 165 SIDVDQQGAHLSWDEAVSL-----LAHETTNETVRSRCVKELLAWAGSDRVIIGGDFNTI 219 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI----RIDHIMLSPEAT 233 ++ +K++ + + Y+ G+ R+D + S E Sbjct: 220 FCSKAVRKMETVFEDALAGTSDYLTGTYT-----------KSGLPVAPRLDFLFYSKELA 268 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSL 261 A + + G DH PV Sbjct: 269 --CLKAHVVRESAG-----DHYPVKAVF 289 >gi|229009858|ref|ZP_04167078.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides DSM 2048] gi|228751476|gb|EEM01282.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides DSM 2048] Length = 263 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 34/271 (12%), Positives = 66/271 (24%), Gaps = 19/271 (7%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET--KTEDKNFP----FETLQS 52 + + T N +S + +I LA I+E + D+I LQE + +N + Sbjct: 1 MKLLTLNCHSWQEENQIEKIKYLAKAIQEEDYDVIALQEVSQSIQAENVCGNKKKDNFGL 60 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 L + + ++ + F + Sbjct: 61 LLLEELRALNVKEYNIIWDFSHIGYDVYEEGLAIITKHNIVKEDTFFVSENKDTTYWKTR 120 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 I + + ++ N + Sbjct: 121 KIVSATIAYNDKNITFYSCHFGWWNDEEESFKDQVDRLMERVNSNELSFLMGDFNNNARL 180 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 E + WD + +RID I+ + Sbjct: 181 EGEGYEYTMQKGLYDTYELAIEKDEGTTVQGEIAGWD------ENKQNLRIDLILSNQS- 233 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 ++S+++ SDH V V LDI Sbjct: 234 -KTVNSSKVIFNGTNRNVISDHFGVEVQLDI 263 >gi|225448227|ref|XP_002266265.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 192 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 11/41 (26%), Positives = 23/41 (56%), Gaps = 2/41 (4%) Query: 4 VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTED 42 + + TWNV ++ + +I+ D++C+QETK ++ Sbjct: 3 MKIITWNVRGANDSSKRKIIKNYIRNQRVDLMCIQETKIQE 43 >gi|153836873|ref|ZP_01989540.1| metal-dependent hydrolase [Vibrio parahaemolyticus AQ3810] gi|149749831|gb|EDM60576.1| metal-dependent hydrolase [Vibrio parahaemolyticus AQ3810] Length = 288 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 42/277 (15%), Positives = 78/277 (28%), Gaps = 24/277 (8%) Query: 2 SVVTVATWNV-----NSIRARIH-----NLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51 + + + +WN+ N + L ++ + DII QE D + Sbjct: 20 NSINLTSWNIEWLSINGGKVSRTSDDFVKLNQYVDKTQADIIAFQEV---DSKAAVQKAV 76 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 Y I + N ++ T + + + T + LR + Sbjct: 77 GDGYAIYLSDRAQSNN--KHLQFSDTNQYTGFAVRKDIEVSDPADFSITRDNSKLRFASY 134 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 + + + + + R + + Sbjct: 135 IVVNPSQKDELHLLSVHLKAGCSGAYKNSRDCQTLSQQGEALAKWMSEREKKKEQYAVMG 194 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 D L ++ + DA T DT S + IDHI++SP+ Sbjct: 195 DFNHNLSYQRDWLWAIMTLGNDAQLVTRDTQADCKVRSNKNPSKTHQFRSLIDHIIVSPQ 254 Query: 232 ATSLLHSA----RIDTKPRGWTKPSDHTPV--IVSLD 262 +A I + K SDH PV V+L+ Sbjct: 255 I--KAKNAHQTLFISQDVLDY-KLSDHCPVNATVTLN 288 >gi|323448661|gb|EGB04556.1| hypothetical protein AURANDRAFT_72478 [Aureococcus anophagefferens] Length = 1523 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 12/64 (18%), Positives = 22/64 (34%), Gaps = 20/64 (31%) Query: 6 VATWNVNSIRA----------RIHN----------LAAWIKENNPDIICLQETKTEDKNF 45 + +WNV R L +W++ D++CLQE K + + Sbjct: 7 LISWNVAGWRTTLEEMTRTTKARKGRSPEEEHQAALRSWLERLRADVVCLQEVKLKRSDV 66 Query: 46 PFET 49 + Sbjct: 67 EAQA 70 Score = 42.1 bits (97), Expect = 0.094, Method: Composition-based stats. Identities = 7/39 (17%), Positives = 15/39 (38%) Query: 198 THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 ++ W Y + +N G RID++++ Sbjct: 389 HPQRSERFTCWHQYHNKRYENVGSRIDYVLVDRALFEAA 427 >gi|228989540|ref|ZP_04149525.1| Endonuclease/exonuclease/phosphatase [Bacillus pseudomycoides DSM 12442] gi|229003360|ref|ZP_04161190.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock1-4] gi|228757978|gb|EEM07193.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock1-4] gi|228770265|gb|EEM18844.1| Endonuclease/exonuclease/phosphatase [Bacillus pseudomycoides DSM 12442] Length = 263 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 43/286 (15%), Positives = 81/286 (28%), Gaps = 49/286 (17%) Query: 4 VTVATWNVNS---------IRARIHNLAAWIKENNPDIICLQET----KTED-------K 43 + + T N +S IR +LA I+E D+I LQE K ++ Sbjct: 1 MKLLTLNCHSWQEENQIEKIR----HLAKTIQEEGYDVIALQEVSQSIKAQNVCGNKKKD 56 Query: 44 NF------PFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA 97 NF E L S NY+I + + +++ Sbjct: 57 NFGLVLLAELEKLGSGNYNIVWDYSHIGYDIYEEGSAIITKHPIVKQDSFFVSESK---- 112 Query: 98 TFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII 157 +T + + + + + +++ + + Sbjct: 113 ----DTSYWKARKIVSATVSYKGKNMTFYSCHLGWWNDEEETFQGQVDCLTQHVNENELS 168 Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK 217 D N + + L + + + D WD Sbjct: 169 ILMGDFNNNARLQGEGYDYLMQKGLYDTYELAFKKDEGTTVQGKIAG---WD------EN 219 Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + +RID I+ + + S+++ SDH V V LDI Sbjct: 220 KQNLRIDLILSNKP--KTVISSKVIFNGINRNIISDHFGVEVQLDI 263 >gi|121999171|ref|YP_001003958.1| endonuclease/exonuclease/phosphatase [Halorhodospira halophila SL1] gi|121590576|gb|ABM63156.1| Endonuclease/exonuclease/phosphatase [Halorhodospira halophila SL1] Length = 277 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 36/287 (12%), Positives = 71/287 (24%), Gaps = 65/287 (22%) Query: 2 SVVTVATWNV-NSI-------------------RAR---IHNLAAWIKENNPDIICLQET 38 + + V ++N+ N+I R R + + WI D++ LQE Sbjct: 26 ATIRVVSYNIQNAIATSRYHHYFTRGWKHVLPDRQRQGNLERIGGWI--EPYDLVGLQEV 83 Query: 39 KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT 98 Q + +Q Sbjct: 84 -------------------------DAGSFRTGFMNQVEHLAYKADFPYWYIQTNRNMGR 118 Query: 99 FTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP 158 + L + + RF + ++ + + Sbjct: 119 LAQQSNGLLARYRPAEIREHRLPGLIPGRGALQIRFGSGSEALNVIQVHMALGRRTRMRQ 178 Query: 159 QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN 218 + Q+ + + + H L++F + N Sbjct: 179 MDFLAELVNAHRHIIVMGDLNCQADS-PELLRLGRRTDLSEPIHGLHTFPSWRPKH---N 234 Query: 219 KGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 IDHI++S + AR+ SDH P+ + L +PE Sbjct: 235 ----IDHILISSTL--QVQRARVLEHAL-----SDHLPIAMELALPE 270 >gi|325189144|emb|CCA23669.1| conserved hypothetical protein [Albugo laibachii Nc14] gi|325190842|emb|CCA25330.1| conserved hypothetical protein [Albugo laibachii Nc14] Length = 291 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 36/275 (13%), Positives = 80/275 (29%), Gaps = 22/275 (8%) Query: 4 VTVATWNV------NSIRA---RIHNLAAWIKENNPDIICLQE-TKTEDKNFPFETLQSL 53 + + T+N+ + R R ++ I +P I+ QE + + + Sbjct: 23 LKIMTFNLRYANTEDGPRGWIYRKDHVIDIINRYHPAIMGTQEGLADQLDDIDKNLIHPY 82 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 + I + F + + L + Sbjct: 83 KRFGIEREPNGEHEEIFYDTSVVELI-KGGNFWLSETPDTFGTLGWDADCVRLVTWCHFQ 141 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 ++ + + R + RL + AG I+ + + +D Sbjct: 142 LIETKQLFYVFNTQFDHVGAISRQKAARLLWDRIKTIAGTDAIV---FTLGDFNTYRHDP 198 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI----RIDHIMLS 229 + + + +T+A D Y W+ ++ G+ ID + Sbjct: 199 TYKFFTQDEAGPMFQDAWTNATSKVGDVSCTYHAWE--GPAYHLENGVVGANHIDWLFSR 256 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 P + ++ T+ R PSDH P+ + +P Sbjct: 257 PNL--KVLETKVITEERNGFHPSDHYPMQTEILLP 289 >gi|325268539|ref|ZP_08135169.1| AP endonuclease domain protein [Prevotella multiformis DSM 16608] gi|324989067|gb|EGC21020.1| AP endonuclease domain protein [Prevotella multiformis DSM 16608] Length = 366 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 39/274 (14%), Positives = 78/274 (28%), Gaps = 38/274 (13%) Query: 4 VTVATWNVNSIRAR-IHN-----LAAWIKENNPDIICLQETKT----EDKNFPFETLQSL 53 + V ++NV + +I ++ DI+CLQE + D+ +P Sbjct: 101 IKVLSYNVFMFSTWSEPGGEQNPIVDYILKSKADIVCLQEAQADVEGTDRIYPALKKHYP 160 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL--RIGNL 111 + + + + + +LS+Y + + G + ++ T + + Sbjct: 161 YFRLMVKKKPGADHMVLLSRYPVLWQDSIPYGSGSNQSVAYLVDIKGTKTLVVNNHFESN 220 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLEL------EEPLIFAGDYNIIPQPHDCYN 165 L G+ + L + + D Sbjct: 221 GLSTGDKENFKTLVKGDMDTHDARNESFHLLRKLGEVSARRAPQAVAVARYVRKYLDRKV 280 Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI--RI 223 P+I D + + + Y+ G+ RI Sbjct: 281 PVILCGDFNDSPLSYTHRTIARELTDCYVASGNGPGI------SYHR------SGMYFRI 328 Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257 DHI S + A++D + SDH PV Sbjct: 329 DHIFCSDDFEPY--GAKVDDSA----ETSDHYPV 356 >gi|239980898|ref|ZP_04703422.1| hypothetical protein SalbJ_15743 [Streptomyces albus J1074] gi|291452759|ref|ZP_06592149.1| conserved hypothetical protein [Streptomyces albus J1074] gi|291355708|gb|EFE82610.1| conserved hypothetical protein [Streptomyces albus J1074] Length = 290 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 35/277 (12%), Positives = 67/277 (24%), Gaps = 44/277 (15%) Query: 4 VTVATWNVN-SIRARIHNLAAW------IKENNPDIICLQET------KTEDKNFPFETL 50 + VAT+N++ A + ++ + D+I LQE +++ ++ E Sbjct: 38 LRVATYNIHAG--AGEDEVFDLDRQVRALRSLDADVIGLQEVDVHWGERSQWRDLARELA 95 Query: 51 QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 L H+ S + + P + R T + Sbjct: 96 HRLGMHVAFAPIYSLDPEPAAAGPTPPRREFGVAVLSRHPVLRVRNHEITRLSTQGENPL 155 Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170 G + + + + + + Sbjct: 156 PEPGPGFLQATVAVRGIPLDVYATHLDYRPDPAVRAAQVADMLRVMDRPCPVRCPAHLLL 215 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230 D + + + D T RID++ S Sbjct: 216 GDFNARPDAPELTPLWATLRDADPGAPTFPASAP---------------DRRIDYVATSA 260 Query: 231 EATSLLHSARIDTKPRGWTKP----SDHTPVIVSLDI 263 R WT P SDH PV+ L + Sbjct: 261 GIGLR----------RAWTAPTGIASDHLPVVADLHL 287 >gi|218264592|ref|ZP_03478387.1| hypothetical protein PRABACTJOHN_04093 [Parabacteroides johnsonii DSM 18315] gi|218221900|gb|EEC94550.1| hypothetical protein PRABACTJOHN_04093 [Parabacteroides johnsonii DSM 18315] Length = 373 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 44/289 (15%), Positives = 75/289 (25%), Gaps = 47/289 (16%) Query: 2 SVVTVATWNVNSIRARIHN--------LAAWIKENNPDIICLQETKT-EDKNFP-----F 47 +V+ V T+NV + +I + DI+CLQE KNF Sbjct: 105 NVLKVLTYNVMGFG--YKGHTEDSPNPIIRYIANSGADIVCLQEYAVGTSKNFLTNQKIA 162 Query: 48 ETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107 L+ Y S ++ + I IN + L Sbjct: 163 NALKMYRYRSIIPIGTSGTLKFNIAVFSKYPISKSRKIKYESSFNGSSIHELNINGKKLT 222 Query: 108 IGNLYLPHGNPITSTKYDDKISWIK-----------RFLRFASQRLELEEPLIFAGDYNI 156 + N +L + + ++ A I Sbjct: 223 LINNHLESFKLTMEDRSHYSAFIKNLNSETLDGLRSSIEQKLGPAFQIRARQARAVAEEI 282 Query: 157 IPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS 216 D ND + R L++ + + ++ Sbjct: 283 KKIDTDYILVCGDFNDTPISYAHRTIQGPLKDAYAASGRGVGVTYNENFFWF-------- 334 Query: 217 KNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 RID+I+ S + ID + SDH P+ L + E Sbjct: 335 -----RIDNILHSANMKP--INCTIDK-----VRYSDHYPMWCYLQLKE 371 >gi|260776998|ref|ZP_05885892.1| putative phospholipase C [Vibrio coralliilyticus ATCC BAA-450] gi|260606664|gb|EEX32938.1| putative phospholipase C [Vibrio coralliilyticus ATCC BAA-450] Length = 441 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 37/287 (12%), Positives = 77/287 (26%), Gaps = 47/287 (16%) Query: 2 SVVTVATWNVN---------SIRARIHNLAAWIKENNPDIICLQETKTE-DKNFPFETLQ 51 + + + T+N+ R + + ++K D++ LQE + F E + Sbjct: 176 NTLKLMTYNIWALPVIASHIGDRYAL--IPEYVK--GYDVLALQEVFASGREEFLRELAK 231 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 Y + + N + + I Sbjct: 232 EYPYQTKMLDKDGINIYDGGVTIVSRYPIVNQAQYVFPDCTGTDCFADKGVNYAEVIK-- 289 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 + + ++ + ++ A NI Y+ N Sbjct: 290 -----GGKAYHVFATHTASFDTDTARDYRQRQFKQIRELATLLNIPSNETVVYSGDFNVN 344 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYS--FWDYYADSWS-------KNKGIR 222 + A + Y+ +D + ++ +N Sbjct: 345 K---------RKFPGDYQQMIANLSAIEPQYSGYTESTFDPRINDFAGEAMSGGENVEY- 394 Query: 223 IDHIMLSPE-ATSLLHSARID----TKPRGWTK--PSDHTPVIVSLD 262 +D++M+S E A + R+D T R W SDH PV + Sbjct: 395 LDYVMVSDEYAVKAFNDNRVDVPRSTDERLWKHYNLSDHFPVSAVIK 441 >gi|242039787|ref|XP_002467288.1| hypothetical protein SORBIDRAFT_01g022760 [Sorghum bicolor] gi|241921142|gb|EER94286.1| hypothetical protein SORBIDRAFT_01g022760 [Sorghum bicolor] Length = 391 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 42/288 (14%), Positives = 78/288 (27%), Gaps = 48/288 (16%) Query: 2 SVVTVATWNVNS------IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55 + + T+NV IR R+ L IK+++PD IC QE Y Sbjct: 116 TTFKIMTYNVWFREDVEVIR-RMDALGDLIKQHSPDFICFQEI------------TPYIY 162 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + +LS + I++ + F + + + Sbjct: 163 MLLQKSDWWQQYKCLLSHEKAIQMPYYCMQLSKLPVKASDCTPFLNSIMGRELCFTSVST 222 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI-IPQPHDCYNPIIWENDAC 174 G + Q E I P+ + +D Sbjct: 223 GEMKKLMIGTTHLESPCPAPPKWDQMYSKERVDQAKQCLEILGRFPNAILCGDMNWDDKG 282 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI--RIDHI------ 226 G+TDA +++ S N+ + R+D Sbjct: 283 DGPFP-------LQDGWTDAWVELKPGEDGWTYDTKANGMLSGNRKLQKRMDRFVCKLAD 335 Query: 227 --MLSPEATSL--------LHSARIDTKPRGWT---KPSDHTPVIVSL 261 ++S E +I + R PSDH +++++ Sbjct: 336 FKIVSIEMIGKEAIPGVSYYKETKIRKESRMVELPVFPSDHFGLVLTI 383 >gi|160900734|ref|YP_001566316.1| endonuclease/exonuclease/phosphatase [Delftia acidovorans SPH-1] gi|160366318|gb|ABX37931.1| Endonuclease/exonuclease/phosphatase [Delftia acidovorans SPH-1] Length = 289 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 36/301 (11%), Positives = 74/301 (24%), Gaps = 55/301 (18%) Query: 3 VVTVATWNVN---SIRARIH---NLAAWIKENNPDIICLQETKT-----------EDKNF 45 ++ + TWN + R+ +A + + D++CLQE + + Sbjct: 1 MMQILTWNTQWCLGLDGRMDPERIVAHALSMADIDVLCLQEIAVHYPGLQGAPGDQVEQV 60 Query: 46 PFETLQSLNYHI--------ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA 97 + Q+ N VA + D V++ Sbjct: 61 RAALPEGWKVFFGAAVDEFTAVGRQRFGNLVATRLPVLQLAHHRLPYPHDGGVRSMPRCC 120 Query: 98 TFTINTQ----TLRIGNLYLPHGNPITSTKY-------------DDKISWIKRFLRFASQ 140 T +R+ + +L + + + Q Sbjct: 121 TAATVMDAALGPVRVMSTHLEYFSRRQRMAQALALRSLQIEALGQAEAPPQPASDGSPQQ 180 Query: 141 RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHD 200 + GD+N P + + + Q + Sbjct: 181 TKPHTPHAVLCGDFNFEPHEDEYAGL-----SRPWAAGEEGALTAGQWHNSWSVLHPDQP 235 Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 + +D D +S + +D+ R SDH PV++ Sbjct: 236 QPPTFRLFDRQWGPEPGAC----DFAWVSDSLRGHVRGWAVDSDTR----LSDHQPVLLQ 287 Query: 261 L 261 L Sbjct: 288 L 288 >gi|315648386|ref|ZP_07901485.1| Endonuclease/exonuclease/phosphatase [Paenibacillus vortex V453] gi|315276080|gb|EFU39426.1| Endonuclease/exonuclease/phosphatase [Paenibacillus vortex V453] Length = 494 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 36/268 (13%), Positives = 76/268 (28%), Gaps = 27/268 (10%) Query: 4 VTVATWNVNSIR----------ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + ++N +R R + I EN PD+I QE + Sbjct: 38 LRIMSFN---LRYAANDHQPWENRRPVMRNLILENQPDVIGTQE--GLHRQIVDLENDLP 92 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 Y G++ ++ + ++ + L + + + ++ Sbjct: 93 GYGRIGVGREGGEFGEYMAVFYKMDRLKPLEQSHFWLSDTPQIISSASWGNQIPRMVTWV 152 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + + + + + Q+ G IP N Sbjct: 153 RFQDLRNGKTFYMVNTHLDHQSEVSRQKSAALIIDKMKGFAPDIPV-----VMTGDFNTV 207 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYS-FWDYYADSWSKNKGIRIDHIMLSPEA 232 + + G A + T+D + + D G RID I+ S Sbjct: 208 PGSDTYSIFTSNGLSDGHITAKKHTNDDLGTFHNYKDPTGGG----SGNRIDWILHSTGW 263 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVS 260 + + I PSDH P++++ Sbjct: 264 --NVLHSEIINYNEEGQYPSDHYPIMIT 289 >gi|146297973|ref|YP_001192564.1| endonuclease/exonuclease/phosphatase [Flavobacterium johnsoniae UW101] gi|146152391|gb|ABQ03245.1| Endonuclease/exonuclease/phosphatase [Flavobacterium johnsoniae UW101] Length = 305 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 41/273 (15%), Positives = 78/273 (28%), Gaps = 38/273 (13%) Query: 6 VATWNVNSIRARIHNLAAWIK-------------ENNPDIICLQETKTEDKNFPFETLQS 52 V ++NV R+ N+ W+ E +PDI+C+QE + + + Sbjct: 57 VMSYNV-----RLFNVFKWLDRDDIPENIKGFIDEKDPDILCIQEY-SNSAHLDLKVYP- 109 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 + +I G++ G AI SK+ I+ + A +R+ N++ Sbjct: 110 -HRYIFIDGKQIKTGQAIFSKFPIIDEGK---IVFPKSDNNVVYADIKRGKDIIRVYNMH 165 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 L + + + + I + H Sbjct: 166 LQSIKISPDVSEISDDIDNVNQKKSQRIYARISKGFTQQQEQAEIFKEHIKKCKYPIIIC 225 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 + DA + Y + RID+I + Sbjct: 226 GDMNNSPFSYVYRNIKGKLKDAFEEAGEGFGA----TYKFKYYPA----RIDYIFTDTKM 277 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 + D + SDH P++ L I + Sbjct: 278 KVKQFESFPDFEN------SDHYPIMTRLSIDQ 304 >gi|73748062|ref|YP_307301.1| endonuclease [Dehalococcoides sp. CBDB1] gi|73659778|emb|CAI82385.1| probable endonuclease [Dehalococcoides sp. CBDB1] Length = 639 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 34/268 (12%), Positives = 73/268 (27%), Gaps = 47/268 (17%) Query: 4 VTVATWNV-NSIRAR----IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 + + T+N+ N + + LA I+++ D++ LQE Sbjct: 412 LRIMTYNLHNGFNTQGKLDMEALARVIEDSGADVVALQEI------------------SR 453 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + + + ++T + + + LP Sbjct: 454 GWVISGRVDMLEWLSQRLNMYSAFGATAGEYWGNAILSKYPILDTHNVSLESEELPIKRG 513 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + D ++ E + + + I+ + +A E Sbjct: 514 YLNAVLDLGGRYLYLAATHLHHVPEEGDVRLIQAGELADFWDNAPATIILGDFNAEPDSE 573 Query: 179 VRQSFQKL--QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 ++ + T+ + LY RID+I SPE + Sbjct: 574 EIGLLRQAGLSDSLEGQTSVLTYHSADLY---------------QRIDYIWASPEI-EYI 617 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDIP 264 S I + SDH +I + + Sbjct: 618 DSYTIVS------LASDHLAIIADIRLS 639 >gi|298386889|ref|ZP_06996444.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 1_1_14] gi|298260563|gb|EFI03432.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 1_1_14] Length = 315 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 42/292 (14%), Positives = 78/292 (26%), Gaps = 45/292 (15%) Query: 4 VTVATWNV-----------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52 +TVA++N+ + R +A ++ ++ DI QE E L Sbjct: 27 LTVASYNLRNANGSDSARGDGWGQRYPVIAQIVQYHDFDIFGTQECFLHQLKDMKEALPG 86 Query: 53 LNY-HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 +Y + K + + + L + + Sbjct: 87 YDYIGVGRDDGKDKGEHSAIFYRTDKFDIVEKGDFWLSETPDVPSKGWDAVLPRICSWGH 146 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 + ++ + I + R S L E+ N+ N Sbjct: 147 FKCKDTGFEFLFFNLHMDHIGKKARVESAFLVQEKMKELGRGKNLP------AILTGDFN 200 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 K + + + ++ +D +S+++ RIDHI +SP Sbjct: 201 VDQTHQSYDAFVSKGVLCDSYEKCDYRYALNGTFNNFD--PNSFTE---SRIDHIFVSPS 255 Query: 232 A--------------------TSLLHSA--RIDTKPRGWTKPSDHTPVIVSL 261 + I K PSDH PV V L Sbjct: 256 FHVKRYGVLTDTYRSVRENSKKEDVRDCPEEITIKAYEARTPSDHFPVKVEL 307 >gi|320162825|gb|EFW39724.1| predicted protein [Capsaspora owczarzaki ATCC 30864] Length = 284 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 17/104 (16%), Positives = 31/104 (29%), Gaps = 32/104 (30%) Query: 1 MSVVTVATWNVNSI-----------------RARIHNLAAWIKENNPDIICLQE------ 37 M + + TWN++ + R + ++ DI+CLQE Sbjct: 1 MPRLRILTWNISGLDISDASPPGETIATKLERLAF-GMLD----HDADILCLQEFPVPSD 55 Query: 38 TKTEDKNFPFE----TLQSLNYHIETCGQKSYNGVAILSKYQPI 77 ++ FE + L + IL K + Sbjct: 56 SRMPAHQKTFESLSKLFRELGWEFVNSAPSHCGWSCILVKQPWL 99 >gi|159900071|ref|YP_001546318.1| endonuclease/exonuclease/phosphatase [Herpetosiphon aurantiacus ATCC 23779] gi|159893110|gb|ABX06190.1| Endonuclease/exonuclease/phosphatase [Herpetosiphon aurantiacus ATCC 23779] Length = 319 Score = 51.7 bits (122), Expect = 1e-04, Method: Composition-based stats. Identities = 48/261 (18%), Positives = 77/261 (29%), Gaps = 43/261 (16%) Query: 4 VTVATWNV--NSIRARIHNLAAWIKENNPDIICLQETKTE-DKNFPFETLQSLNYHIETC 60 + + TWNV N I LAA I++ PDI+ LQE + D P E L+ L + Sbjct: 94 LRIMTWNVFYN--TQDIAGLAATIRQQQPDIVVLQEYNFQLDPQLP-EALEDLYPYAALD 150 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 G+A LS++ E+ G D AT T+ + Sbjct: 151 PHSGAGGLATLSRWPLRELAPVARGVDSCGCQYLEIATPNGPTRLINTHPH------IPL 204 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 ++ + +L ++ N Sbjct: 205 ASFKGIYTKTQQDPTFDHLLKLIADQSQPLI--------------LAGDLNTTERQPNYL 250 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + Q+L + Y+F + K R+D+IM + Sbjct: 251 RLRQQLGDAYQQQGWGL------GYTFPSN--GAIPKAV--RLDYIMPNAHWQP------ 294 Query: 241 IDTKPRGWTKPSDHTPVIVSL 261 G SDH V+ L Sbjct: 295 -LRAWNGTANLSDHGFVVADL 314 >gi|218709697|ref|YP_002417318.1| putative phospholipase C precursor [Vibrio splendidus LGP32] gi|218322716|emb|CAV18892.1| putative phospholipase C precursor [Vibrio splendidus LGP32] Length = 444 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 44/285 (15%), Positives = 87/285 (30%), Gaps = 43/285 (15%) Query: 2 SVVTVATWNVNSIRA-------RIHNLAAWIKENNPDIICLQETKTE-DKNFPFETLQSL 53 + + V T+N+ ++ A R + ++K D++ LQE F E + Sbjct: 179 NTLKVITYNIWALPAIASHIGDRYDLIPQYVK--GYDVLALQEVFANGRDEFLRELAKEY 236 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 Y + + N + + I N Sbjct: 237 PYQTKMLDKDGINIYDGGVIIVSRYPIVNEAQYVFPDCTGTDCFADKGVNYAEVIKNGQA 296 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 H + +D + R + ++ A NI Y+ N Sbjct: 297 YHVFGTHTASFDTDTARDYRQ-------RQFKQMRALAQSLNIPASETVVYSGDFNVNKL 349 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYS--FWDYYADSWS-------KNKGIRID 224 F + +Q F LQ T+ Y+ +D ++++ +N +D Sbjct: 350 KFPDDYQQMFANLQADK---------PTYSGYTASTFDPRINNFAGEPMSGGENVEY-LD 399 Query: 225 HIMLSPEATSLLH-SARID------TKPRGWTKPSDHTPVIVSLD 262 ++++S E + H R+D ++ SDH PV + Sbjct: 400 YVVVSSEYAAKAHNDNRVDVPRSTSSELWKHYNLSDHFPVSAVIK 444 >gi|327312514|ref|YP_004327951.1| endonuclease/exonuclease/phosphatase family protein [Prevotella denticola F0289] gi|326944378|gb|AEA20263.1| endonuclease/exonuclease/phosphatase family protein [Prevotella denticola F0289] Length = 290 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 39/249 (15%), Positives = 77/249 (30%), Gaps = 18/249 (7%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQP 76 R L +I P + QE + + L+ +Y I + + Sbjct: 46 RCPQLCDFINFEQPAVFGTQEVLATQLHDLLQGLEGYDY-IGVGRDDGREEGEYAAIFYR 104 Query: 77 IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 +++ L + + + + +RI T+ K + + Sbjct: 105 KDLLKLLDSGNFWLSQTPDHPSLGWDAACIRICTW--GKFEDKTTGKQFYFFNTHMDHVG 162 Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIR 196 ++R L G + + + D + + R + + + Sbjct: 163 TVARRESTRLILQRIGQLAKSQPTILTGDFNVDQTDEIYGIFSRSAILRDCYAHARQRMA 222 Query: 197 ATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK----PS 252 T ++ D+ DS S RIDH+ +S + + I T + K S Sbjct: 223 PTG------TWNDFMQDSRSN---ARIDHVFVSSDFD--IQHYAIFTNSYWFGKSRRNIS 271 Query: 253 DHTPVIVSL 261 DH PV+V L Sbjct: 272 DHYPVMVKL 280 >gi|229170375|ref|ZP_04298048.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH621] gi|228613072|gb|EEK70224.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH621] Length = 263 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 34/271 (12%), Positives = 66/271 (24%), Gaps = 19/271 (7%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET--KTEDKNFP----FETLQS 52 + + T N +S + +I LA I+E + D+I LQE + +N + Sbjct: 1 MKLLTLNCHSWQEENQIEKIKYLAKAIQEEDYDVIALQEVSQSIQAENVCGNKKKDNFGL 60 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 L + + ++ + F + Sbjct: 61 LLLEELRALNVKEYNIIWDFSHIGYDVYEEGLAIITKHNIVKEDTLFVSENKDTTYWKTR 120 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 I + + ++ N + Sbjct: 121 KIVSATIAYNDKNITFYSCHLGWWNDEEESFKDQVDRLMERVNSNELSFLMGDFNNNARL 180 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 E + WD + +RID I+ + Sbjct: 181 EGEGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWD------ENKQNLRIDLILSNQS- 233 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 ++S+++ SDH V V LDI Sbjct: 234 -KTVNSSKVIFNGTNRNVISDHFGVEVQLDI 263 >gi|163787900|ref|ZP_02182346.1| endonuclease/exonuclease/phosphatase family protein [Flavobacteriales bacterium ALC-1] gi|159876220|gb|EDP70278.1| endonuclease/exonuclease/phosphatase family protein [Flavobacteriales bacterium ALC-1] Length = 340 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 38/265 (14%), Positives = 77/265 (29%), Gaps = 42/265 (15%) Query: 4 VTVATWNVNSIR-----------ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52 ++V ++NV R ++ +I + P+I+CLQE + +D P Sbjct: 100 ISVMSYNV---RLFNIYSWLPSETVKKDIIEFIHKEKPEILCLQEYRKDD---PIVLDNY 153 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 N++ V I+ + + I T+R+ NL+ Sbjct: 154 YNFNASHKDTVKRGQVVFS----KFPIINSGSLEFPNTFNNGIFVDIVKQKDTIRVYNLH 209 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 L T + + F + S +E + + Sbjct: 210 LQSSGIQTDVEALKNETSDNLFKQVGSTFKLQQEQVEL----------FLKHKSKCNYKT 259 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 ++ + + + T + Y + +RID I+ + Sbjct: 260 IVTGDFNNTAYSYIYKEIKGNNLVDTFEEAGNGFGKTYDFKFFP----MRIDFILADKDF 315 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPV 257 T ++ K SDH P+ Sbjct: 316 T-------VNGFKTYDVKLSDHYPI 333 >gi|56694220|gb|AAW22882.1| unknown [Solanum lycopersicum] Length = 190 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 11/41 (26%), Positives = 18/41 (43%), Gaps = 2/41 (4%) Query: 3 VVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTE 41 V + +WNV + + I+ D+ C QETK + Sbjct: 2 TVKIISWNVRGLNQANKRCVIKNLIQGWKADVYCFQETKIQ 42 >gi|326674296|ref|XP_003200110.1| PREDICTED: transposon TX1 uncharacterized 149 kDa protein-like [Danio rerio] Length = 1583 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 33/262 (12%), Positives = 69/262 (26%), Gaps = 28/262 (10%) Query: 1 MSVVTVATWNVNSIRARIH--NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 M V+ + + N+N R L IK N D++ +QET ++ N + + Sbjct: 287 MGVIRLGSLNLNGARDIKKRMQLYELIKHKNIDVMYVQETHSDCSNTIDWEKEWEGKVVL 346 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 T S G AIL + + + + N+Y P Sbjct: 347 THTSSSRGGGAILFAKHFLPVSYQIEEVIAGRLVII---KTEFEKYRINFINVYAPTNGT 403 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + + ++ L + + + + Sbjct: 404 ERVIFLNSINTLLQNCRTDDYVFLGGDFNCTENERLDRNHVEPHANSSRVLRELIET--- 460 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLH 237 D R + Y++ + + R+D +++ Sbjct: 461 ----------HSLCDIWREFNGNVKQYTW----LHTRENFISMARLDRFYCFKHHVNVVR 506 Query: 238 SARIDTKPRGWTKPSDHTPVIV 259 I +DH+ V+ Sbjct: 507 KCEIVP-----VGFTDHSLVLC 523 >gi|319761678|ref|YP_004125615.1| endonuclease/exonuclease/phosphatase [Alicycliphilus denitrificans BC] gi|330823549|ref|YP_004386852.1| endonuclease/exonuclease/phosphatase [Alicycliphilus denitrificans K601] gi|317116239|gb|ADU98727.1| Endonuclease/exonuclease/phosphatase [Alicycliphilus denitrificans BC] gi|329308921|gb|AEB83336.1| Endonuclease/exonuclease/phosphatase [Alicycliphilus denitrificans K601] Length = 253 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 34/269 (12%), Positives = 70/269 (26%), Gaps = 36/269 (13%) Query: 3 VVTVATWNVN----SI----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 ++ VAT+N++ + R IHNL +++ + DI+CLQE + Sbjct: 13 ILRVATYNIHKGVQGLGPARRLEIHNLGLAVEQLDADIVCLQEVR--------------- 57 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 P G + L + Sbjct: 58 -----KMNHKEAAYFKRWPRVPQAEYLAPEGYAAVYRTNAYTRHGEHGNALLTRWPVVGH 112 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 I+ +++ + + L + Sbjct: 113 QHEDISDHRFEQRGLLHVEVEVQGRCVHAIVVHLGLIPGSRVRQVERLQRFIAREVPAGA 172 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 + + A ++ + Y A + +++DH+ + T Sbjct: 173 PLVVAGDFNDWGLQIKHMLAGFGLYEYDDAPQAFTYPA----RLPLVQLDHVYV-RGLTP 227 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 L + R W + SDH P+I + Sbjct: 228 LGLQV---PRGRIWWRMSDHLPLIAEFRL 253 >gi|218679478|ref|ZP_03527375.1| putative phosphatase protein [Rhizobium etli CIAT 894] Length = 162 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 8/61 (13%) Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 YS+ + S + +D+ +S L SARIDT+ G SDH P+ V Sbjct: 108 RPDSYSWMNPEDHSER----MHLDYCFVSCGLKDRLKSARIDTQSVG----SDHFPLWVE 159 Query: 261 L 261 + Sbjct: 160 I 160 >gi|332043524|gb|EGI79720.1| Endonuclease/exonuclease/phosphatase [Lacinutrix algicola 5H-3-7-4] Length = 339 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 42/268 (15%), Positives = 75/268 (27%), Gaps = 46/268 (17%) Query: 4 VTVATWNVNSIRARIHNLAAWI-------------KENNPDIICLQETKTEDKNFPFETL 50 +++ +NV R+ NL WI KE +PDI+ LQE P ET+ Sbjct: 100 LSIMNFNV-----RLFNLYKWIPEDNIENKLVEFVKEESPDILALQEYH------PRETV 148 Query: 51 QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 Y + + + IV + I A T+R+ N Sbjct: 149 DFSFYKYKYEKLSGKKVKLGQAIFSKYPIVNSGSIAFPNTANNAIFADVVKGNDTVRVYN 208 Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170 ++L T + K F + + Sbjct: 209 IHLQSLRIDTRVEQLTTQDSEKLFDGVGQTFKMQQFQTEL----------FLLHKRQCKY 258 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230 + + D + + + Y + +RID I+ P Sbjct: 259 KMIVSGDFNNTALSYVYKEIKGDLVDTFKAAGNGF-GRTYNFKFFP----MRIDFILTHP 313 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVI 258 + I++ + SDH P++ Sbjct: 314 DFK-------INSFKTYDVEFSDHYPIM 334 >gi|68062911|ref|XP_673465.1| hypothetical protein [Plasmodium berghei strain ANKA] gi|56491335|emb|CAI03862.1| hypothetical protein PB405793.00.0 [Plasmodium berghei] Length = 119 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 2/40 (5%) Query: 7 ATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKN 44 + N+N + + I L W+ + +P CLQET +K+ Sbjct: 1 MSLNINGLNSPIKRHRLTDWLHKQDPTFCCLQETHLREKD 40 >gi|327312703|ref|YP_004328140.1| endonuclease/exonuclease/phosphatase family protein [Prevotella denticola F0289] gi|326944135|gb|AEA20020.1| endonuclease/exonuclease/phosphatase family protein [Prevotella denticola F0289] Length = 366 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 39/266 (14%), Positives = 84/266 (31%), Gaps = 22/266 (8%) Query: 4 VTVATWNVN--SIRARIHN----LAAWIKENNPDIICLQETKT----EDKNFPFETLQSL 53 + V ++NV SI + + +I ++ DI+CLQE + D+ +P Sbjct: 101 IKVLSYNVFMFSIWSEPGGEQNPIVDYILKSKADIVCLQEAQASMEGTDRIYPALKKHYP 160 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 + + + + + +LS+Y + + G + + ++ + Sbjct: 161 YFRLMVKKKPGADHMVLLSRYPVLWQDSIPYGSNSNQSVAYMVDIKGTK----TLVVNNH 216 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 N +++ ++ + +K + + E L G ++ P Sbjct: 217 LESNGLSTDDKEEFKTLVKGNMGTGEAKDESFHLLRKLGSVSVRRAPQAEAVARYVRKYL 276 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI--RIDHIMLSPE 231 + V + + Y G+ RIDHI S + Sbjct: 277 DRKVPVILCGDFNDSPLSYTHRTIARELTDCYVASGNGPGISYHKSGMYFRIDHIFCSDD 336 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPV 257 A++D SDH P+ Sbjct: 337 FEPY--GAKVDNSVT----ASDHYPI 356 >gi|154492338|ref|ZP_02031964.1| hypothetical protein PARMER_01972 [Parabacteroides merdae ATCC 43184] gi|154087563|gb|EDN86608.1| hypothetical protein PARMER_01972 [Parabacteroides merdae ATCC 43184] Length = 353 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 36/235 (15%), Positives = 64/235 (27%), Gaps = 18/235 (7%) Query: 22 AAWIKENNPDIICLQETKTE-DKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80 AA+IK+ PDIIC QE D + ++++ ++ + Y I Sbjct: 124 AAYIKQLQPDIICFQE--APGDGYYHRDSIRYAFDYVLYKYISRRTDHLPTTIYSRYPIH 181 Query: 81 THLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQ 140 + + + A IN Q +R+ N + + A + Sbjct: 182 SVKALYYKNSSNMSLIADVRINNQYIRVINNHFETTSVNAYRGIITAPGKSLEVRAKAVK 241 Query: 141 RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT-DAIRATH 199 L L+ + H + C + + Sbjct: 242 DLILKMKNNYLKRAEQADSIHAEIERSPYPVLVCGDFNDTPASYTYHQLRKGLTDGFRDC 301 Query: 200 DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDH 254 + + Y+F K RID++ S P SDH Sbjct: 302 GSGYQYTF-------RQLYKLWRIDYVFYSEFLKG--QDCFSPDAPY-----SDH 342 >gi|222478473|ref|YP_002564710.1| Endonuclease/exonuclease/phosphatase [Halorubrum lacusprofundi ATCC 49239] gi|222451375|gb|ACM55640.1| Endonuclease/exonuclease/phosphatase [Halorubrum lacusprofundi ATCC 49239] Length = 280 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 44/292 (15%), Positives = 81/292 (27%), Gaps = 41/292 (14%) Query: 1 MSVVTVATWNVNSIR------------ARIHNLAAWIKENNPDIICLQET---------- 38 M+ + V ++NV R R + ++ + PD+ QE Sbjct: 1 MTAIRVLSYNV---RYANRDDHHDAWHDRRDAVGRLVRFHRPDVAAFQEPLPGQRRDLRE 57 Query: 39 KTEDKNF------PFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQA 92 + + F + +S + T + + P E T D + Sbjct: 58 RLSEYEFVGRGREADDEGESCPIAVRTDRWEVVDDDTFWLSETPSEPSTDWGADYPRIAT 117 Query: 93 RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG 152 + L + + + + + P++ G Sbjct: 118 WARVRAIDGDAALLVVNTHFDHVSAHARRESARLLCQRLPDVAGPDAGESDETIPVVLVG 177 Query: 153 DYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYA 212 D+N + + A T A L Sbjct: 178 DFNCTSGSDPHRILVGDDPTAETDTAPIDDSGIALRDAATAADLRHGPETSL-------- 229 Query: 213 DSWSKNK-GIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +++ G RIDH ++SPE + + D RG PSDH PV+ L + Sbjct: 230 TDFARLIDGRRIDHALVSPEVGAEAFATLTDRDDRGR-YPSDHLPVLARLAL 280 >gi|170703616|ref|ZP_02894358.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria IOP40-10] gi|170131473|gb|EDT00059.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria IOP40-10] Length = 286 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 18/41 (43%), Gaps = 4/41 (9%) Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 D + ++ + ID R SDH PV++ L++ Sbjct: 250 DFVFVTDTLLPRVTRCEIDGDVR----ASDHQPVVLELEVS 286 >gi|254252251|ref|ZP_04945569.1| Metal-dependent hydrolase [Burkholderia dolosa AUO158] gi|124894860|gb|EAY68740.1| Metal-dependent hydrolase [Burkholderia dolosa AUO158] Length = 290 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 11/39 (28%), Positives = 18/39 (46%), Gaps = 4/39 (10%) Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 D + ++ S + ID R SDH P+++ LD Sbjct: 256 DFVFVTDTLLSRVKRCEIDGDVR----ASDHQPIVLELD 290 >gi|225448944|ref|XP_002272707.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1082 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 35/263 (13%), Positives = 80/263 (30%), Gaps = 38/263 (14%) Query: 4 VTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 + + WNV + R I + ++ D++CL ETK +D Sbjct: 3 IKILCWNVRGLHDCDKRKLIKGV---VRNQKADLVCLLETKVKD---------------V 44 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA-TFTINTQTLRIGNLYLPHGN 117 + + GV + ++ G L R +E ++ + G Sbjct: 45 STQLVNSVGVGRFLNWASVDARGTAGGLLLIWDNRVLENLEVESGGYSISVRFRNCSDG- 103 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + S + + + + EE G + +N + + + Sbjct: 104 ------FSWVFSGVYGPVIGSEKEDFWEELGAIRGLWEDPWCIGGDFNAVRYPEERRNAP 157 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 + ++ + +R +++ + R+D ++S + Sbjct: 158 RLTADMRRFSEVIGELGLRDIPLAGGPFTW----IGGLNSQAASRLDRFLISDQWEDHFS 213 Query: 238 SARIDTKPRGWTKPSDHTPVIVS 260 + PR SDH+P+I+ Sbjct: 214 AISQSALPR---LVSDHSPIILE 233 >gi|24214114|ref|NP_711595.1| hypothetical protein LA_1413 [Leptospira interrogans serovar Lai str. 56601] gi|24195001|gb|AAN48613.1| hypothetical protein LA_1413 [Leptospira interrogans serovar Lai str. 56601] Length = 360 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 40/265 (15%), Positives = 78/265 (29%), Gaps = 31/265 (11%) Query: 18 IHNLAAWIKENNPDIICLQETKTEDKN-FPFETLQSLNYHIETCGQKSYNGVAILSKYQP 76 + +A +I +PD+I QE +N F + L+ + I + S + P Sbjct: 92 LKKVADYIHSEDPDVILFQELHDGAENTFREDQLERILSRIGSEYVCRSEAFYWKSNFVP 151 Query: 77 IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 + G L +++ + ++ L + N + +D Sbjct: 152 HPKILGSVGMKLATISKYKISDGIRHSLPLMPADPISTQFNLKRAILQNDLPIEGGDKFT 211 Query: 137 FASQRLE-------------------------LEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 + L+ + GD+N+IP D + Sbjct: 212 VLNTHLDAFSQGTDTMHRQVETITGLLKELDLAGHYWVLGGDFNLIPPGFDRKSMHPNGA 271 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 + + N I + Y+++ ++ ID+I S Sbjct: 272 FFYSDEQEIKPLFDRWNSAVPFKILNGPEKEKYYTYYPNDPAIGKPDRT--IDYIFYSSN 329 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTP 256 ++D K WT SDH P Sbjct: 330 LKQ--SGYKVDQKDILWTI-SDHFP 351 >gi|325860217|ref|ZP_08173342.1| endonuclease/exonuclease/phosphatase family protein [Prevotella denticola CRIS 18C-A] gi|325482304|gb|EGC85312.1| endonuclease/exonuclease/phosphatase family protein [Prevotella denticola CRIS 18C-A] Length = 366 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 39/266 (14%), Positives = 84/266 (31%), Gaps = 22/266 (8%) Query: 4 VTVATWNVN--SIRARIHN----LAAWIKENNPDIICLQETKT----EDKNFPFETLQSL 53 + V ++NV SI + + +I ++ DI+CLQE + D+ +P Sbjct: 101 IKVLSYNVFMFSIWSEPGGEQNPIVDYILKSKADIVCLQEAQASMEGTDRIYPALKKHYP 160 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 + + + + + +LS+Y + + G + + ++ + Sbjct: 161 YFRLMVKKKPGADHMVLLSRYPVLWQDSIPYGSNSNQSVAYMVDIKGTK----TLVVNNH 216 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 N +++ ++ + +K + + E L G ++ P Sbjct: 217 LESNGLSTDDKEEFKTLVKGNMGTGEAKDESFHLLRKLGSVSVRRAPQAEAVARYVRKYL 276 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI--RIDHIMLSPE 231 + V + + Y G+ RIDHI S + Sbjct: 277 DRKVPVILCGDFNDSPLSYTHRTIVRELTDCYVASGNGPGISYHKSGMYFRIDHIFCSDD 336 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPV 257 A++D SDH P+ Sbjct: 337 FEPY--GAKVDNSVT----ASDHYPI 356 >gi|281344397|gb|EFB19981.1| hypothetical protein PANDA_021346 [Ailuropoda melanoleuca] Length = 112 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 37/106 (34%), Gaps = 12/106 (11%) Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E R L + D R H YSF+ ++S RIDH++ + Sbjct: 4 NKETRALNAILDELDLIDIYRTLHPRTKEYSFYSNAHGTFS-----RIDHVLGHKTGLNR 58 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 I SDH + + L+ K ++S + ++ I Sbjct: 59 YQKIEIIPCI-----FSDHNALKLELN--HKEKPGRNSNTWRLRTI 97 >gi|147767377|emb|CAN62439.1| hypothetical protein VITISV_044009 [Vitis vinifera] Length = 1290 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 33/261 (12%), Positives = 74/261 (28%), Gaps = 30/261 (11%) Query: 1 MSVVTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 + + +WNV ++ + A I+ D++C+ ETK + Sbjct: 266 FMKLRLVSWNVRGANDSSKRKVIKAMIRSQRADLVCIPETKIQ----------------- 308 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 GV + L ++ + +GN ++ Sbjct: 309 ----TMTEGVVRSLGSXRFLDWGXMGAQGLXGGILVCXDKRSLELLEMEVGNFFISCRLK 364 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + + + EE G + +N + + D Sbjct: 365 NVEDGVVWIFTGVYGPCNRKEREELWEELGAIRGIWEEPWCLGGDFNVTLSQRDRSRQGS 424 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 + + ++ + A+ +YS+ + S R+D ++S + Sbjct: 425 LNGAMRRFAQVVDDLALIDLPLQGGVYSW----SGGRSNQTWARLDRFLVSQGWLDIFKG 480 Query: 239 ARIDTKPRGWTKPSDHTPVIV 259 A PR SD P+++ Sbjct: 481 AVQCRLPR---PTSDXFPILL 498 >gi|150397136|ref|YP_001327603.1| endonuclease/exonuclease/phosphatase [Sinorhizobium medicae WSM419] gi|150028651|gb|ABR60768.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium medicae WSM419] Length = 368 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 45/308 (14%), Positives = 86/308 (27%), Gaps = 74/308 (24%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQ--------SLNYHIETCGQKSYNGVAILSKYQP 76 I + + DI+CLQE D + + Y + + + ++ Sbjct: 66 IADCDADILCLQE---ADNMAALQAFEYGYLFRMVGNGYRQKYLVEGNDTRGIDVAVMMR 122 Query: 77 IEIVTHLPGDDL-----------------------------DVQARFIEATFTINTQTLR 107 E + L + +E I + L Sbjct: 123 EETRDGQKIECLEVKSHAALTYEDLDLFNDELALTNRPRDRIFKRDCLEVDVRIGGRPLT 182 Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELE----------EPLIFAGDYNII 157 + ++L P + + R + R +E + GD N Sbjct: 183 LYVVHLKSMGPAREGLDGRQATMAVRRAEVKAVRHIIEGRFGSGDTADKIFAVCGDMNDY 242 Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK 217 + + + E + L + GF ++ + + Sbjct: 243 QEKVNVLGDRRNGYEFVPYEETSSALDVLSHDGFVVNPMLRRPVLDRWTLFHSRGP--EE 300 Query: 218 NKGIRIDHIMLSPEATSL-------LHSA------------RIDTKPR-GWTKP--SDHT 255 ++D+I LS E + A ++ PR GW +P SDH Sbjct: 301 RHLCQLDYIWLSQELARRNAARVPEVIRAGQPYRTIFPAGQEVERYPRTGWDRPKASDHC 360 Query: 256 PVIVSLDI 263 PV+++LDI Sbjct: 361 PVVMTLDI 368 >gi|88811277|ref|ZP_01126533.1| Endonuclease/exonuclease/phosphatase [Nitrococcus mobilis Nb-231] gi|88791816|gb|EAR22927.1| Endonuclease/exonuclease/phosphatase [Nitrococcus mobilis Nb-231] Length = 280 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 38/96 (39%), Gaps = 14/96 (14%) Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 ++ + ++ H+L+++ + +N IDHI++S Sbjct: 193 CRHVIVMGDLNCLSRSVEFDYLDKHTDLCEPIHNLHTYPSWRPH---RN----IDHILVS 245 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 P + SA P SDH PVI+ +++PE Sbjct: 246 PTL--QVRSAEALNYPL-----SDHLPVIMEVELPE 274 >gi|154251594|ref|YP_001412418.1| endonuclease/exonuclease/phosphatase [Parvibaculum lavamentivorans DS-1] gi|154155544|gb|ABS62761.1| Endonuclease/exonuclease/phosphatase [Parvibaculum lavamentivorans DS-1] Length = 231 Score = 51.3 bits (121), Expect = 1e-04, Method: Composition-based stats. Identities = 37/269 (13%), Positives = 73/269 (27%), Gaps = 54/269 (20%) Query: 4 VTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQETKTE---DKNFPFETL-QSLN 54 + V +WN++ R + + ++ ++PDI+ QE + D P L ++L Sbjct: 6 LRVLSWNIHGGVGRDGRFDLARIVRLVERHDPDIVAFQEVDSRGRLDGGAPLSILKEALG 65 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 H S V +RF + + + R Sbjct: 66 EHAAEGRTISAPD----------------GHYGHAVISRFPLSGTRVCDLSFRSREPRCA 109 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 I + ++ L +RL+ + A + + Sbjct: 110 ISANIETPWGPLRLVTTHLGLSIWERRLQSSMLVDLAREEKLPC--------------IM 155 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 + + S W + +R+D I A Sbjct: 156 MGDFNDWFSFGWVRRRLRAVLPSRTMEQTFPSAWPF----------LRLDRIYCGGAAA- 204 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + + D G SDH P+I + + Sbjct: 205 -IVKSWTDE---GAAPISDHLPIIADISL 229 >gi|154149223|ref|YP_001406798.1| putative endonuclease/exonuclease/phosphatase [Campylobacter hominis ATCC BAA-381] gi|153805232|gb|ABS52239.1| putative endonuclease/exonuclease/phosphatase [Campylobacter hominis ATCC BAA-381] Length = 437 Score = 51.3 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 40/293 (13%), Positives = 76/293 (25%), Gaps = 77/293 (26%) Query: 2 SVVTVATWNV-----------------NS-IRA-----RIHNLAAWIKENNPDIICLQET 38 S + +AT+NV N A ++ +K + DI+ LQE Sbjct: 17 SELKIATYNVENLFDAKVQGSEYNDFKNGNWNAEKYSFKLEKTVDVLKRLDADIVALQEI 76 Query: 39 KTEDKNFP--FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV--THLPGDDLDVQARF 94 +NF + Q Y + N ++ I+I P Sbjct: 77 ----ENFEVLKDLAQKSGYKFYKFSKSDKNSPFGVAVLSRIKIKDTIFYPPPLNIKSRDI 132 Query: 95 IEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDY 154 + FT + I + S + + + + + + D Sbjct: 133 LRCDFTFEGENFSIFVNHFLAKKNAYSKRIANATQLSSVLRNVKNVVVLGDFNTNYGSD- 191 Query: 155 NIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADS 214 + ++ ++E Sbjct: 192 -SLLNDIINRYNLVDLWKFLPSIERISHQ------------------------------- 219 Query: 215 WSKNKGIRIDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSL 261 G IDHI+LS + + S + + K SDH P+ ++ Sbjct: 220 ----SGRAIDHILLSQDFFKNVTLNYKDESFGVFDE---NFKNSDHLPIFFTI 265 >gi|121593299|ref|YP_985195.1| endonuclease/exonuclease/phosphatase [Acidovorax sp. JS42] gi|222110021|ref|YP_002552285.1| endonuclease/exonuclease/phosphatase [Acidovorax ebreus TPSY] gi|120605379|gb|ABM41119.1| Endonuclease/exonuclease/phosphatase [Acidovorax sp. JS42] gi|221729465|gb|ACM32285.1| Endonuclease/exonuclease/phosphatase [Acidovorax ebreus TPSY] Length = 255 Score = 51.3 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 38/272 (13%), Positives = 81/272 (29%), Gaps = 42/272 (15%) Query: 3 VVTVATWNVN----SI----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 ++ VAT+N++ + R IHNL +++ + DI+CLQE + Sbjct: 15 ILRVATYNIHKGVQGLGPARRLEIHNLGLAVEQLDADIVCLQEVR--------------- 59 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 + + P G + + L + Sbjct: 60 -----RMNRKEASYFERWPHVPQAEYLAPEGYEAIYRTNAFTRHGEHGNALLTRWPVIGH 114 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 I+ +++ R L ++ ++P + A Sbjct: 115 QHEDISDHRFEQ------RGLLHVEVEIQGRRVHAIVVHLGLVPGSRIRQVAQLQRFIAR 168 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW---SKNKGIRIDHIMLSPE 231 E + I+ L+ + D ++ ++ +++DH+ + Sbjct: 169 EVPEDAPLVVAGDFNDWGLQIKRMLAGFGLFEY-DDAPQAFTYPARLPMVQLDHVYV-RG 226 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 T L + R W + SDH P+I + Sbjct: 227 LTPLGLQV---PRGRIWWRMSDHLPLIAEFKL 255 >gi|307944213|ref|ZP_07659554.1| putative endonuclease/exonuclease/phosphatase [Roseibium sp. TrichSKD4] gi|307772559|gb|EFO31779.1| putative endonuclease/exonuclease/phosphatase [Roseibium sp. TrichSKD4] Length = 342 Score = 51.3 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 39/263 (14%), Positives = 81/263 (30%), Gaps = 32/263 (12%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQET--KTEDKNFPFE---TLQSLNYHIE 58 + + + N+ + L ++ N DI+ QET +D+ + + L + E Sbjct: 102 LKLISINLERLYLNDKTLTDYLVAQNADILLFQETFWWQQDRLLALDGLTEIAGLGPYPE 161 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + +I SK+ + ++ + + + I ++ P G Sbjct: 162 HLVRGELGQTSIFSKFPITNVEY--------IEVPASDVRNLTGYREIVIVDIETPQG-- 211 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + + + R+ ++ L+ +P+I D + Sbjct: 212 -PIQLFAVHPNSPRSPTRWQERQNYLDLLTDAVRRRQQASD-----SPVIIMGDWNTSPW 265 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 F L G A + F+DY G +DH+ +S + Sbjct: 266 SWHFFTLLDETGLNTAFPNGIPQTTRF-FYDYRLHWI---LGAIVDHVAVSDDF--QFTD 319 Query: 239 ARIDTKPRGWTKPSDHTPVIVSL 261 G +DH P+ V L Sbjct: 320 VS-----LGPDVGTDHLPLEVEL 337 >gi|332186411|ref|ZP_08388155.1| endonuclease/Exonuclease/phosphatase family protein [Sphingomonas sp. S17] gi|332013394|gb|EGI55455.1| endonuclease/Exonuclease/phosphatase family protein [Sphingomonas sp. S17] Length = 276 Score = 51.3 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 43/270 (15%), Positives = 75/270 (27%), Gaps = 30/270 (11%) Query: 3 VVTVATWNVNSIR-----------ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51 + V T+NV R AR + I+ PD+I QE + Sbjct: 18 TLKVMTFNV---RYASDEGAERWAARRPVMVELIRRAVPDVIGTQE--LLQRQGDDIVRA 72 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 Y + + +D ++ T + +L Sbjct: 73 LPGYRWF-----GRDRMGGHDDEHMGIFYRPDRLTLVDQGDFWLSDTPEVVGSQSWGTDL 127 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 + TK ++ A + + E A P+I Sbjct: 128 PRMASWAVFETKDAKPRRFLFVDTHLAHRDEDAEARDKAAALILARLPTLAKGLPVILAG 187 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 D + + + + + +F D ++ RID++ L Sbjct: 188 DMNARPDTAAYRRFAGALTDCWLGAKRREGPEM-TFHD-----FTGTPDRRIDYLFLRGF 241 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + + DT RG T PSDH PV +L Sbjct: 242 RADAIAT---DTWHRGKTYPSDHFPVRATL 268 >gi|268561416|ref|XP_002646438.1| Hypothetical protein CBG18823 [Caenorhabditis briggsae] Length = 382 Score = 51.3 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 46/299 (15%), Positives = 86/299 (28%), Gaps = 74/299 (24%) Query: 4 VTVATWNVNSI--RA---RIHNLAAWIKEN-------------------------NPDII 33 +++ +WN++ + R+ R+ +A +K+ NPDI+ Sbjct: 114 LSLMSWNIDGLDGRSLATRMKAVATIVKKTPQNPIFRPKNRVLEIFQKIARMAQVNPDIL 173 Query: 34 CLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR 93 LQE + P + LQSL + Y ++SK +E + + + Sbjct: 174 FLQEV-VDRDLEPIDKLQSLYKIYYSNKGCQYYTAILVSKMFEVEKHDVVHFQNSGMYRT 232 Query: 94 FIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGD 153 +I + + N +L + L F GD Sbjct: 233 LQIVEGSIGGMKVFLVNTHLE--SMRDHRAQRMAQFSFCMDRCAEIIANNPGCFLFFGGD 290 Query: 154 YNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD 213 N+ + + + + A DT +++ Y D Sbjct: 291 LNLRDEEIS----------------------SIPDGVLDAWVSAGCDTKTKWTWDTYKND 328 Query: 214 SWSKNKG--IRIDHIM---------LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + G +R D I S E + S PSDH + + Sbjct: 329 NKQGFNGAKMRFDRIYWHGPFNQVHFSLEGRQRIRSC--------LCFPSDHWAINATF 379 >gi|212550735|ref|YP_002309052.1| hypothetical protein CFPG_378 [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|212548973|dbj|BAG83641.1| conserved hypothetical protein [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 343 Score = 51.3 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 35/238 (14%), Positives = 63/238 (26%), Gaps = 15/238 (6%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80 + ++ N DIIC QE + +K +++ VA+ SKY + Sbjct: 112 ILQYVANQNSDIICFQEFRLGNKQLTLSAVRN-TLRATPYFFLLPCRVAVFSKYPILSTK 170 Query: 81 THLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQ 140 G + + + YD + R L + Sbjct: 171 NIPFGSRYNGALIAELNINGRKVTLINCHLESNKILDSEKIDYYDLIQTLNVRKLGAFTY 230 Query: 141 RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHD 200 + + F + D + + Sbjct: 231 MMFHKLTPAFKIRAMQSSIIAEIIRESKNPYTIICGDFNDTPISFTYRKIKGDLEDSFVE 290 Query: 201 THHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257 + S++ N + RID+I S S +A + G + SDH PV Sbjct: 291 SGCG------MGISFNANYFLFRIDYIFHSKNMRSY--NAMV-----GKGEDSDHYPV 335 >gi|15965796|ref|NP_386149.1| hypothetical protein SMc04274 [Sinorhizobium meliloti 1021] gi|15075065|emb|CAC46622.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021] Length = 368 Score = 51.3 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 46/309 (14%), Positives = 90/309 (29%), Gaps = 76/309 (24%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQ--------SLNYHIETCGQKSYNGVAILSKYQP 76 I + + DI+CLQE D + + Y + + + + ++ Sbjct: 66 IADCDADILCLQE---ADNMAALQAFEYGYLFRMAGNGYRQKYLVEGNDSRGIDVAVLMR 122 Query: 77 IEIVTHLPGDDL-----------------------------DVQARFIEATFTINTQTLR 107 E + L + +E I + L Sbjct: 123 EETRDGQKIECLEVKSHAALTYEDLDLFNDELALTNRPRDRIFKRDCLEVDVRIGGRPLT 182 Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPL---IFAGDYNIIPQPHDCY 164 + ++L P + + R + R +E A I + Y Sbjct: 183 LYVVHLKSMGPAREGLDGRQATMAVRIAEVKAVRHIIERRFGRGHTADKVFAISGDMNDY 242 Query: 165 N-------PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK 217 + E + L + GF + ++ + + Sbjct: 243 QEKVKVLGDRRNGYEFLPHEETTSALDVLSHDGFVENPNLRRPVLDRWTLFHSRG---PE 299 Query: 218 NKGI-RIDHIMLSPEATSL-------LHSA------------RIDTKPR-GWTKP--SDH 254 ++ + ++D+I LSPE + A ++ PR GW +P SDH Sbjct: 300 DRHLCQLDYIWLSPELARRNAARLPEIIRAGQPYRTIFPAGQEVERYPRTGWDRPKASDH 359 Query: 255 TPVIVSLDI 263 PV+++LDI Sbjct: 360 CPVVMTLDI 368 >gi|141475|sp|P14381|YTX2_XENLA RecName: Full=Transposon TX1 uncharacterized 149 kDa protein; AltName: Full=ORF 2 gi|214846|gb|AAA49976.1| ORF2 [Xenopus laevis] Length = 1308 Score = 51.3 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 49/259 (18%), Positives = 88/259 (33%), Gaps = 34/259 (13%) Query: 1 MSVVTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 M+ ++++T N N R R+ + +++++ + LQET T + ++++E Sbjct: 1 MA-LSISTLNTNGCRNPFRMFQVLSFLRQGGYSVSFLQETHTTPEL-------EASWNLE 52 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 G+ +N + S Q + AT I + L + Sbjct: 53 WKGRVFFNHLTWTSCGVVTL-------FSDSFQPEVLSATSVIPGRLLHLRVRESGRTYN 105 Query: 119 ITSTKYDDKISWIKRFLRFASQRLEL---EEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + + RF S +E +E LI GD+N D P ++ Sbjct: 106 LMNVYAPTTGPERARFFESLSAYMETIDSDEALIIGGDFNYTLDARDRNVPKKRDSSESV 165 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E+ F D R + +++ S+ RID I +S S Sbjct: 166 LRELIAHF------SLVDVWREQNPETVAFTYVRVRDGHVSQ---SRIDRIYISSHLMSR 216 Query: 236 LHSARIDTKPRGWTKPSDH 254 S+ I P SDH Sbjct: 217 AQSSTIRLAP-----FSDH 230 >gi|297199103|ref|ZP_06916500.1| endonuclease/exonuclease/phosphatase [Streptomyces sviceus ATCC 29083] gi|197715179|gb|EDY59213.1| endonuclease/exonuclease/phosphatase [Streptomyces sviceus ATCC 29083] Length = 238 Score = 51.3 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 37/274 (13%), Positives = 70/274 (25%), Gaps = 47/274 (17%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 M +V V ++N+ S+R LA I+ PD++ +QE Sbjct: 4 MVLVKVLSYNIRSMRDDTDALARVIQACEPDLVLIQE-------------------APRF 44 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + + S + + + L + G Sbjct: 45 FRWRKKLARLASTAGLVVLTGGGTAAGPAILCNLRVTVERTEDVLLPLIPGQHRRGFATA 104 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + + + ++ + + H + D Sbjct: 105 VVRIGAARLGVLSCHLSLQKDERYDQAGMLLDRLAGMGVEHAVAGGDLN--DRPTGPAFS 162 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + LQ+ T T ++ RID I + + Sbjct: 163 RIADSLQDCWATS------PTGGEVTWT-------RTEPHRRIDAIFATKGIE--VRGCG 207 Query: 241 I--------DTKPRGWTKPSDHTPVIVSLDIPEP 266 + +T R T DH PV+ +LDIP Sbjct: 208 VPLDLPGITETDLRAAT---DHLPVLATLDIPAS 238 >gi|150865047|ref|XP_001384099.2| RNA exonuclease NGL2 (Carbon catabolite repressor protein 4 homolog) [Scheffersomyces stipitis CBS 6054] gi|149386303|gb|ABN66070.2| RNA exonuclease NGL2 (Carbon catabolite repressor protein 4 homolog) [Scheffersomyces stipitis CBS 6054] Length = 463 Score = 51.3 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 35/100 (35%), Gaps = 22/100 (22%) Query: 4 VTVATWNV-------------NSIRARIH------NLAAWIKENNPDIICLQETKT-EDK 43 V + ++N+ N A + L K N DI+CLQE + K Sbjct: 61 VKIMSYNILAQSLIRRTLFPTNG--AALKWPNRSKALLEEFKHYNADILCLQEVDVIQFK 118 Query: 44 NFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHL 83 +F + L Y+ + + N + + + I + Sbjct: 119 SFWSKEFDKLGYNHKFYSCGTKNHGVAIVFRKDMFIFRYQ 158 >gi|114332258|ref|YP_748480.1| endonuclease/exonuclease/phosphatase [Nitrosomonas eutropha C91] gi|114309272|gb|ABI60515.1| Endonuclease/exonuclease/phosphatase [Nitrosomonas eutropha C91] Length = 253 Score = 51.3 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 38/266 (14%), Positives = 69/266 (25%), Gaps = 27/266 (10%) Query: 2 SVVTVATWNVN-SI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55 + +AT+N++ + R +H L +++ N DII LQE + Q Sbjct: 6 RTLHIATYNIHKGLSFFNQRVVLHELRDYLRSLNVDIIFLQEV-IGEHTLHASRFQDWPK 64 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + + H L I+ L Sbjct: 65 DAQYEFLADAVWSDFAYGKNAVYNHGHHGNAILSRFPISSWENEDISAHRFESRGLLHCE 124 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + I L + + I ++P F Sbjct: 125 LAIPGWKD---ALHCICVHLGLFKRGRYRQLEAIERRIRQLVPPDAPLVLA------GDF 175 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 + Q L + + SF +R+D I + Sbjct: 176 NDWRGVANQALASRLNLVEVFQYTQGKAARSFPSVLPL-------LRLDRIYIRGF---Q 225 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 + +ARI R W++ SDH + + Sbjct: 226 VKNARIFHN-RPWSRISDHAALSAQI 250 >gi|241766910|ref|ZP_04764717.1| Endonuclease/exonuclease/phosphatase [Acidovorax delafieldii 2AN] gi|241362633|gb|EER58476.1| Endonuclease/exonuclease/phosphatase [Acidovorax delafieldii 2AN] Length = 290 Score = 51.3 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 38/301 (12%), Positives = 81/301 (26%), Gaps = 55/301 (18%) Query: 4 VTVATWN------VNSIRARIHNLAAWIKENNPDIICLQETKTE---------DKNFPFE 48 + + TWN ++ + + + + D++CLQE Sbjct: 1 MQLVTWNTQWCCGLDGVVSPQRIVQHARALADFDVLCLQEIAVHYPALEGNAGHDQVALL 60 Query: 49 TLQSLNYHIET---------CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF 99 Y + GQ+ G I ++ +++ H D R + Sbjct: 61 RALLPGYQVFFGAAVDEWTPDGQRQRFGNLIATRLPVLQLQHHPLPYPADAGVRSMPRMC 120 Query: 100 TINTQT------LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFAS-------------Q 140 T+ T +R+ +L + + + + Q Sbjct: 121 TVATVRDPGLGAVRVMTTHLEFYSKRQRMAQARALRVLHAQACAHAVAPPEASGDGSPFQ 180 Query: 141 RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHD 200 + GD+N P + + + ++ + A Sbjct: 181 SKAHTPHAVLCGDFNFEPHEPEHAAICAPAG----ADDSEGAPLGMRLWDSWRLLHAAAP 236 Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 + +D + D + +S + +D T+ SDH PV VS Sbjct: 237 QPPTFRLYDRRYGPEPGSC----DFVFVSDSLKGRVQRFVVD----AATQASDHQPVAVS 288 Query: 261 L 261 + Sbjct: 289 I 289 >gi|152993433|ref|YP_001359154.1| hypothetical protein SUN_1850 [Sulfurovum sp. NBC37-1] gi|151425294|dbj|BAF72797.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1] Length = 514 Score = 51.3 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 48/298 (16%), Positives = 84/298 (28%), Gaps = 49/298 (16%) Query: 18 IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ--------SLNYHIETCGQKSYNGVA 69 + + + + + DI+ LQE + F LQ Y T + + VA Sbjct: 57 LDHTTEVLCDLDADIVALQEI---ENESVFNALQKRLKRVGCPYRYSAITHKKGAPIQVA 113 Query: 70 ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKIS 129 +LS++ ++ L +E ++ L I + + + K Sbjct: 114 LLSRFP-LKKHRDLQVSFSPYVRNILEVEAEVDGYPLTIFANHWKSKSRKGV---ESKRI 169 Query: 130 WIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNM 189 R L + + I GD N + + + + N Sbjct: 170 AYARTLEKRILSMPASKEYIILGDLNSNYDAYLTLPKKLNDTQGKTGI-NHILKTIDNNK 228 Query: 190 GFTDAIRATHDTHHLYSFW---DYYADSWSKNKGIR--IDHIMLSPEATS---------- 234 + + YS W Y + G R +DHI+L P Sbjct: 229 LISKSQIRKAPEGMHYSTWNELSYKERWSHRFYGHRSTLDHILLPPSMFDGKGIDYVNNS 288 Query: 235 -LL--------HSARIDTKPRGWTKP-----SDHTPVIVSLD----IPEPRKKQQDST 274 + I+ K SDH PV D IP + + +T Sbjct: 289 FRVFKTDRLFTSKGYINRWQIKNGKHTGRGYSDHLPVYAIFDTKPYIPSVKDMPEKAT 346 >gi|229131369|ref|ZP_04260269.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST196] gi|228652113|gb|EEL08050.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST196] Length = 263 Score = 51.3 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 34/271 (12%), Positives = 66/271 (24%), Gaps = 19/271 (7%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET--KTEDKNFP----FETLQS 52 + + T N +S + +I LA I+E + D+I LQE + +N + Sbjct: 1 MKLLTLNCHSWQEENQIEKIKYLAKAIQEEDYDVIALQEVSQSIQAENVCGNKKKDNFGL 60 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 L + + ++ + F + Sbjct: 61 LLLEELRALNVKEYNIIWDFSHIGYDVYEEGLAIITKHNIVKEDTFFVSENKDTTYWKTR 120 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 I + + ++ N + Sbjct: 121 KIVSATIAYNDKNITFYSCHLGWWNDEEESFKDQVDRLMERVNSNELSFLMGDFNNNARL 180 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 E + WD + +RID I+ + Sbjct: 181 EGEGYEYTMQKGLYDTYELAIEKDEGTTVQGEIAGWD------ENKQNLRIDLILSNRS- 233 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 ++S+++ SDH V V LDI Sbjct: 234 -KTVNSSKVIFNGTNRNVISDHFGVEVQLDI 263 >gi|147853994|emb|CAN83404.1| hypothetical protein VITISV_022676 [Vitis vinifera] Length = 709 Score = 51.3 bits (121), Expect = 2e-04, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 8/44 (18%) Query: 4 VTVATWNVNSIRAR-----IHNLAAWIKENNPDIICLQETKTED 42 + V +WN IR + A IK D++CLQETK ++ Sbjct: 453 LRVLSWN---IREANDSEKRKVIKALIKGQKVDVVCLQETKMQE 493 >gi|329113454|ref|ZP_08242235.1| Endonuclease/Exonuclease/Phosphatase [Acetobacter pomorum DM001] gi|326697279|gb|EGE48939.1| Endonuclease/Exonuclease/Phosphatase [Acetobacter pomorum DM001] Length = 227 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 26/129 (20%), Positives = 47/129 (36%), Gaps = 11/129 (8%) Query: 1 MSVVTVATWNVNSIR---ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57 M V + +WN+ +R A +H++AA I+ PD++ +QE E P ++ Sbjct: 25 MEGVRIISWNL--LRRTGATVHDIAALIEAEKPDVLLMQEATIEIDVLPDVIG---GHYA 79 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 +GVA S+ F I + + N++L HG Sbjct: 80 RNPQPGRIHGVACWSRIPFARAPRACTI---PSGPLFKRHAQIIEYENFSLANVHLSHGQ 136 Query: 118 PITSTKYDD 126 + + Sbjct: 137 MLNRKQLRR 145 >gi|56757079|gb|AAW26711.1| SJCHGC01233 protein [Schistosoma japonicum] Length = 399 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 40/279 (14%), Positives = 83/279 (29%), Gaps = 34/279 (12%) Query: 1 MSVVTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55 + + V +WN+N + R+ ++ IK+ ++CLQE E L+S Y Sbjct: 118 LPIFNVLSWNINGLESANLNKRMSSVVQTIKKEEFHVVCLQEVIVSCLKILREQLES-TY 176 Query: 56 HIETCGQKSYNG----VAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 HI + + + V ++ K+ I + T + +++ + Sbjct: 177 HIFSASDHNSSWDYFVVILVKKHPDIVVDTDTVSIQPFPNSVMNRHLLSVDLSLSQSFRQ 236 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 N T + + + + + + + + + Sbjct: 237 SNVELNLRMFTTHLESCAEYSAVRSAQLKSVWDTMSYYVNSGQFRAGSQGNRASILCGDL 296 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYA--DSWSKNKGI-------R 222 + + + + + WD ++ KG+ R Sbjct: 297 NLRDSEVSMLGGLPYGIQDVWNECGRRVEIRNT---WDPMHNPNARRLFKGVPRAHMTFR 353 Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTK-------PSDH 254 D + + S L ID RG K PSDH Sbjct: 354 YDRMYV---LGSRLK--PIDFGLRGIEKIKDLSCLPSDH 387 >gi|326430099|gb|EGD75669.1| hypothetical protein PTSG_07788 [Salpingoeca sp. ATCC 50818] Length = 709 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 31/288 (10%), Positives = 71/288 (24%), Gaps = 36/288 (12%) Query: 4 VTVATWNVNS-------IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56 + + +WN+N + R+ + + + D++ LQE + ++ ++ + + Sbjct: 434 LRLVSWNINGFTPHDELLPGRLAKMQEELSGLDADVVLLQEAERQNLQLLHTLMEEIGF- 492 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 + P+ ++ A F+ + R+ G Sbjct: 493 -------------VPCDAPPLATLSPKHCVPEHFTATFMRESRFELLAQERMPFQSSQRG 539 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + + + K ++ + + + D Sbjct: 540 RDLNTCILRCTATGNKVWVGNVHFESMGTASEARCEQFAESLVEMSQHEHSVLAGDTNLR 599 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-------HHLYSF-WDYYADSWSKNKGI------R 222 E N R+ Y F WD + R Sbjct: 600 DEEGDDGCSAFNKQMLPGSRSIVQDAWELSGSPRQYRFTWDTLLNDRVDTTSWGGRPRAR 659 Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKP-SDHTPVIVSLDIPEPRKK 269 D + S P SDH + V L + + + Sbjct: 660 FDRCFVKGLTASDFRLIGTHKSPDVLVGLVSDHFGICVDLHWAKGKAE 707 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 35/284 (12%), Positives = 76/284 (26%), Gaps = 41/284 (14%) Query: 4 VTVATWNVN----SIRARIHNLAAWIKEN----NPDIICLQETKTEDKNFPF--ETLQSL 53 + V +WN+N S R R+ ++ D++ LQE ++ + +Q Sbjct: 79 LRVLSWNINAPSKS-RQRLPKDYDTLQGQVTTLRSDVVMLQEV--VERQLADLVKVMQDA 135 Query: 54 NYHIETCGQKSYNGVAIL----SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 + Y+G +I + + +A F + + T + Sbjct: 136 GFSRCGGVPLVYSGDSIAPSVPPHFTLTFVRKKRLQLVAHKRAPFTNSRKARDLNTCTVR 195 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 + + + + R Q L+ + + Sbjct: 196 CKRTGKEVWLGNVHLETYRKYAGRRCLQFLQSLQ-----------ALSRHDLGILAGDMN 244 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSF-------WDYYADSWSKNKGI 221 +A ++Q DA +++ W + + N I Sbjct: 245 LREAEAQRVLQQCRGAAPYTSIGDAWEMVGSPKEQEFTWDLQLNTSWSH----FPNNPRI 300 Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 R D + + + SDH + L +P Sbjct: 301 RFDRCYV-KGLRARSFELVGTRALTHFGHFSDHFGICTHLQLPS 343 >gi|254495120|ref|ZP_05108044.1| endonuclease/exonuclease/phosphatase family protein [Polaribacter sp. MED152] gi|85819470|gb|EAQ40627.1| endonuclease/exonuclease/phosphatase family protein [Polaribacter sp. MED152] Length = 325 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 47/286 (16%), Positives = 89/286 (31%), Gaps = 37/286 (12%) Query: 2 SVVTVATWNV--------N-------SI-RARIHNLAAWIKENNPDIICLQETKTEDKNF 45 SV ++AT+N+ N S+ +A + + + NPDII QE D N Sbjct: 52 SVFSIATYNIGYLSGMTNNRPVPKPKSLFKANLQKVKKETQAVNPDIIAFQEI---DYNA 108 Query: 46 -------PFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT 98 E + SL Y+ S V Y P + + I + Sbjct: 109 SRSYHINQEEEVASLGYNY------SARTVNWDENYLPFPYWPISMHFGKVISGQSILSK 162 Query: 99 FTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP 158 + + Q + + + + +K + + F Sbjct: 163 YPLANQERVVLSRVEDSPFYRDAFYLERLAQIVKANINGKEIVIINIHLEAFDKPTRAKQ 222 Query: 159 QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-K 217 ++ND L + + + + +D A+++ K Sbjct: 223 FQEVEAIFNKYKNDYPTLLLGDFNARARDKSSVVQTFFKDDNIGNAAFNYDAIANTFDTK 282 Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + RID+I + E + S R+ + + SDH PV + + Sbjct: 283 DPYERIDYIFYTKETIEYV-SGRVLNEY---EQASDHLPVFMKFKL 324 >gi|224085215|ref|XP_002196659.1| PREDICTED: hypothetical protein [Taeniopygia guttata] Length = 390 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 31/261 (11%), Positives = 72/261 (27%), Gaps = 27/261 (10%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDK--NFPFETLQSLNYHIETCGQKSYNGVAILSKY 74 R+ + ++ D++ LQE +E + + + +G+ + S++ Sbjct: 29 RVRLIGDTLRHEGFDLVLLQEVWSEQDYSDLKVKLAGCYPFSHYFRSGVIGSGLCVFSRF 88 Query: 75 QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRF 134 ++ + + + + +L+ + + ++ Sbjct: 89 PILDTLLYQYSLNGY-------PYMLQHGDWFCGKSLHAEYCRDKD-SYLPHRLVQAWEL 140 Query: 135 LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDA 194 +F + + ++ GD N+ P+ W E Sbjct: 141 AQFIRHTSKAADVVLLGGDLNMHPEDVGIRLLRGWTGLRDAFAEAAHFEGCKNGCTLIPD 200 Query: 195 IRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT----- 249 + L GIRID+I+ +S G Sbjct: 201 NCFAAKSELL-----------PFPLGIRIDYILY-KAISSFTVKCAELKTTMGRAPGVDI 248 Query: 250 KPSDHTPVIVSLDIPEPRKKQ 270 SDH V+ +L I + Sbjct: 249 PFSDHEAVMATLHIQRQGQPA 269 >gi|186475729|ref|YP_001857199.1| endonuclease/exonuclease/phosphatase [Burkholderia phymatum STM815] gi|184192188|gb|ACC70153.1| Endonuclease/exonuclease/phosphatase [Burkholderia phymatum STM815] Length = 287 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 4/38 (10%) Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 D + ++ + + L S ID G T+ SDH PVIV + Sbjct: 253 DFVFVTEDLQARLQSCEID----GGTRASDHQPVIVEI 286 Score = 38.6 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 8/42 (19%) Query: 4 VTVATWNVNSIRARIHN---LAAWIKEN----NPDIICLQET 38 + + +WNV R+ H L+ I E + D++C+QE Sbjct: 1 MRLISWNVQWGRSA-HGDVSLSRTIDEARRLADFDVLCMQEV 41 >gi|71991697|ref|NP_493169.2| hypothetical protein T27F6.6 [Caenorhabditis elegans] gi|33302616|sp|O45870|NSMA_CAEEL RecName: Full=Putative neutral sphingomyelinase gi|31441797|emb|CAB04885.2| C. elegans protein T27F6.6, confirmed by transcript evidence [Caenorhabditis elegans] Length = 434 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 34/283 (12%), Positives = 76/283 (26%), Gaps = 26/283 (9%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDK--NFPFETLQSLNYHIETCGQKSYNGVAILSKY 74 R++ + ++ + DI+ LQE + + Y + +GV + S++ Sbjct: 63 RLNKIGQYMIDELYDIVGLQELWSYYDFVRLSEQVSSVYPYFHYFHSGFTGSGVCVFSRH 122 Query: 75 QPIEIVTHLPGDDLDVQARFIEATFTINTQTLR------------IGNLYLPHGNPITST 122 + +T+ + F L + Sbjct: 123 PIVSTLTNRYSLNGFAHHIHRGDWFGGKVVGLTEIEIDGDLRVNFYTTHLHAEYDRENDL 182 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN-----DACFTL 177 + + +F + +I GD N+ P + + Sbjct: 183 YLPHRTAQAFELAQFVRHTARGADVVIVTGDLNMEPCDLGFRLILSHAKLFDAWRMSHEV 242 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML-SPEATSLL 236 E S +L + Y+ + + RID+++ S L Sbjct: 243 ENEDSEGELLKFRGIAKGGTCDRPDNCYT----KRALKNVDDSKRIDYMLFKSGRCNVKL 298 Query: 237 HSARI-DTKPRGWT-KPSDHTPVIVSLDIPEPRKKQQDSTSQN 277 I + G SDH + I + + ++ + Sbjct: 299 EECEITLNQIPGEDLNYSDHVGLRARFTIDDRFRHEKSVNTWE 341 >gi|326664779|ref|XP_003197883.1| PREDICTED: transposon TX1 uncharacterized 149 kDa protein-like, partial [Danio rerio] Length = 1144 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 37/266 (13%), Positives = 84/266 (31%), Gaps = 37/266 (13%) Query: 4 VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 +T +T NV S+++ R ++ + +K D++ +QE PF T T Sbjct: 6 ITFSTINVRSVKSIVRAQSILSLLKTFRSDVLLIQEC-----ALPFLTK-------YTKW 53 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 ++ + + + + +T + + + + +L + + Sbjct: 54 ERLWTQGPSIWSGSNFNKNDGVAVLINNPHILVKGSTVIRDGRAILVNLSFLDRDINVLN 113 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI--IPQPHDCYNPIIWENDACFTLEV 179 + + + P I AGD+N + + + + Sbjct: 114 VYGFNDKNDRYELFEDFQPHMLGRVPFILAGDFNCVLTHKDRRRREDFKLDKTSVLMQAL 173 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 +++ D R TH ++++ + RID++ S Sbjct: 174 ------VRDFKLVDCFRTTHQREEGFTWFSGDGT-----RASRIDYVF-SRNCPP----- 216 Query: 240 RIDTKPR-GWTKPSDHTPVIVSLDIP 264 T R SDH + +L +P Sbjct: 217 ---TDARLTPLFFSDHHMLSCTLSLP 239 >gi|149638074|ref|XP_001509853.1| PREDICTED: similar to CCR4 carbon catabolite repression 4-like [Ornithorhynchus anatinus] Length = 617 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 43/279 (15%), Positives = 72/279 (25%), Gaps = 36/279 (12%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFE--TLQSLNYHIETCGQKSYNGVAILSKYQPIE 78 + I PDI+CLQE D F L L Y + S +E Sbjct: 229 ILEEILGYQPDILCLQEV---DHFFDTFQPLLSRLGYRGTFFPKP-------WSPCLDVE 278 Query: 79 IVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFA 138 G L E + N + + + T + + Sbjct: 279 HNNGPDGCALFFLRDRFELVESTNIRLMALTLKTNQVAIAQTLRCQETGRLFCVAVTHLK 338 Query: 139 SQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN------MGFT 192 ++ D I F E + + Sbjct: 339 ARTGWERLRSAQGSDLLRNLCAITRGAEIPLIVCGDFNAEPTEEVYRHFATSSLNLNSAY 398 Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA-RIDTKPR----- 246 + + T Y+ W A +++ +D+I S A + SA + T+ + Sbjct: 399 KLLSSDGQTEPPYTTWKVRASGEARHT---LDYIWYSQRAL-RVESALGLLTEEQIGPNR 454 Query: 247 --GWTKPSDHTPVIVSL------DIPEPRKKQQDSTSQN 277 PSDH ++ PE + D S Sbjct: 455 LPSLHYPSDHLSLVCDFGFREDPAPPEVPARTSDRGSPR 493 >gi|302543875|ref|ZP_07296217.1| endonuclease/exonuclease/phosphatase [Streptomyces hygroscopicus ATCC 53653] gi|302461493|gb|EFL24586.1| endonuclease/exonuclease/phosphatase [Streptomyces himastatinicus ATCC 53653] Length = 237 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 28/132 (21%), Positives = 46/132 (34%), Gaps = 9/132 (6%) Query: 152 GDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYY 211 ++ + P F ++ L G+ DA RA H YS+ Sbjct: 109 AGLGLVLGDFNVLEPEHRPTYRFFQPFEYGFYEWLGATGYRDAFRALHPDAAEYSWVGRT 168 Query: 212 ADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR-GWTKPSDHTPVIVSLDIPEPR--K 268 D G R DH S + L + +PR G + +DH+ + VSL + R Sbjct: 169 GD------GYRYDHAHASARLAAELRACSYVHEPRTGTDRLTDHSALTVSLALHPARTLP 222 Query: 269 KQQDSTSQNMKP 280 + + + P Sbjct: 223 VTDPTEAAELVP 234 >gi|251791412|ref|YP_003006133.1| Endonuclease/exonuclease/phosphatase [Dickeya zeae Ech1591] gi|247540033|gb|ACT08654.1| Endonuclease/exonuclease/phosphatase [Dickeya zeae Ech1591] Length = 380 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 39/268 (14%), Positives = 78/268 (29%), Gaps = 39/268 (14%) Query: 25 IKENNPDIICLQET------KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIE 78 IK DI+C E + ++ + + I++ VA L++++ + Sbjct: 122 IKALKADILCAVEVENMAVLRDFNQQILADHAFAQYVMIDSPNDPRGIDVACLTRHRITQ 181 Query: 79 IVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFA 138 + TH+ F + I + + + + R A Sbjct: 182 LRTHIFDASGSFTPLFSRDCLE-----VTIDVGLPQPVHVLCNHFKSQNGRNDEERERAA 236 Query: 139 SQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT 198 +RL E + + Q + + E+ A + F D Sbjct: 237 KRRLAQAERVAEIVRGYNLQQEYVVVMGDLNEDAANPWHSLTPLFSIPDLHPVIDP---N 293 Query: 199 HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT--------------- 243 Y++ Y++ + + ++D+I +S + I+ Sbjct: 294 LPETARYTY--YFSGGKPQERLNQLDYIFISTPLHRAKVTCGIERRGIYNIDKIAAKEGA 351 Query: 244 -------KPRGWT-KPSDHTPVIVSLDI 263 W SDH V V LDI Sbjct: 352 EPVTPFPTVTSWDTGASDHAAVWVELDI 379 >gi|84685512|ref|ZP_01013410.1| hypothetical protein 1099457000258_RB2654_11603 [Maritimibacter alkaliphilus HTCC2654] gi|84666669|gb|EAQ13141.1| hypothetical protein RB2654_11603 [Rhodobacterales bacterium HTCC2654] Length = 266 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 28/283 (9%), Positives = 62/283 (21%), Gaps = 42/283 (14%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS-LNYHIETCGQ 62 + + + N +L ++++ +PD++CLQE P + L H+ Sbjct: 1 MRIMSLNSWGGTLW-DSLLPYLRDESPDVLCLQEV-VHSPASPRDWLIYRDGDHVLDQRA 58 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT-----------LRIGNL 111 V G D Sbjct: 59 NLLRDVTGALPDHVPLFCPAARGTLWDGDDPVPSFWGLATFVHRDLPIVGQVQGFVHKGF 118 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP----- 166 ++ + L ++ AG + + Sbjct: 119 EANGFGEHPRSRSGHAVRVWDDRLDRGVSIAQMHGLRDLAGKMDTPERAVQARRFLGLLR 178 Query: 167 --------IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN 218 + D H T + ++ Sbjct: 179 AVAEPGDATVLCGDFNVEPGSETLSYLADEGFDELVTGGGHPTTRTSHY--PKPGRFA-- 234 Query: 219 KGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 D++++ P+ D + SDH P++++L Sbjct: 235 -----DYMLVGPDTRPAAFEVVRDPEV------SDHCPLVLTL 266 >gi|293375717|ref|ZP_06621989.1| endonuclease/exonuclease/phosphatase family protein [Turicibacter sanguinis PC909] gi|292645660|gb|EFF63698.1| endonuclease/exonuclease/phosphatase family protein [Turicibacter sanguinis PC909] Length = 254 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 33/264 (12%), Positives = 77/264 (29%), Gaps = 27/264 (10%) Query: 4 VTVATWNV-----NSIRARIHNLAAW---IKENNPDIICLQETKTEDKNFPFETLQSLNY 55 + + T+N+ + + + ++ IK PD+I QE + + + L Sbjct: 5 LKIVTFNLRITVDDGLNVWENRVSHVVHKIKSEAPDLIGFQEL---TEISLRDLKRQLTD 61 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 ++ + + + L D+ + + + + Sbjct: 62 YVFVGCGRDEQMSGEMVMIAYNKNKLDLMSLDIFWFSDTPYKPGSKKEMMILARPCNVAV 121 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + + + ++ + + E D ++ Q I+ + ++ Sbjct: 122 FKNQLTNQIFRVYNTHYDHMQSSIRVQSSE---QLLNDLHLREQNISLPTLIMGDMNSEP 178 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E ++ + + D Y+F DY K ID+I + Sbjct: 179 QDEEIKAIVNNEIIELNDLTDKLD-----YTFHDY-GKIKIK-----IDYIFATKSV--N 225 Query: 236 LHSARIDTKPRGWTKPSDHTPVIV 259 A SDH PV+V Sbjct: 226 ASKAVAWADCFDGVYLSDHYPVMV 249 >gi|218463453|ref|ZP_03503544.1| hypothetical protein RetlK5_30263 [Rhizobium etli Kim 5] Length = 183 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 9/40 (22%), Positives = 21/40 (52%), Gaps = 2/40 (5%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQET-KTED 42 + + + N R L ++++++ D++CLQE + D Sbjct: 1 MRIISLNAWGGRLH-EALIDYVRQSDADVLCLQEVLRAPD 39 >gi|149199705|ref|ZP_01876737.1| hypothetical protein LNTAR_25155 [Lentisphaera araneosa HTCC2155] gi|149137222|gb|EDM25643.1| hypothetical protein LNTAR_25155 [Lentisphaera araneosa HTCC2155] Length = 275 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 42/262 (16%), Positives = 74/262 (28%), Gaps = 32/262 (12%) Query: 3 VVTVATWNV-NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 V VA++NV A + K N DII E D ++ + L G Sbjct: 31 TVRVASYNVEFGKSATPEQIGEMFKPYNLDIIGFDE--APDGDWTARVGKVLGMKYSFVG 88 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 + S + + + V+ + + G I Sbjct: 89 KISSAN-----HKDKYKTILSRTPLERKVEHDLSVDRRRCWNPASAVRAVTKIDGVAIAF 143 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 S R + +L E + I+ + DA + Sbjct: 144 YSL-HICSTRDREKIGHAYKLVGEVLRKETTERVIVVGDFNN-----NIGDAAMNTFKKA 197 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS--KNKGIRIDHIMLSPEATSLLHSA 239 F+ D Y++ +++ KN G+ IDHI+ A + + + Sbjct: 198 GFKATWKDLK-------IDVSKEYTY-----NAFDPKKNLGV-IDHILCKTSAGAKVTAG 244 Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261 I SDH P+ + Sbjct: 245 GI---IELKKPLSDHKPIWAEI 263 >gi|109073059|ref|XP_001090569.1| PREDICTED: sphingomyelin phosphodiesterase 2 [Macaca mulatta] Length = 423 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 41/299 (13%), Positives = 90/299 (30%), Gaps = 37/299 (12%) Query: 4 VTVATWNVNSI------RA-RIHNLAAWIKENNPDIICLQETKT-EDKNFPFETLQS-LN 54 + + N I RA R+ L ++ + + D+ L+E + +D + + L Sbjct: 9 LRIFNLNCWGIPYLSKHRADRMRRLGDFLNQESFDLALLEEVWSEQDFQYLRQKLSPTYP 68 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN---- 110 +G+ + SK+ E+ H+ + F+ L + + Sbjct: 69 AAHHFRSGIIGSGLCVFSKHPIQELTQHVYTLNGYPYMIHHGDWFSGKAVGLLVLHLSGM 128 Query: 111 -------LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 N +++ +F + + ++ GD N+ P+ C Sbjct: 129 VLNAYVTHLHAEYNRRKDIYLAHRVAQAWELAQFIHHTSKKADVVLLCGDLNMHPEDLGC 188 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223 W LE R + + G+RI Sbjct: 189 CLLKEWTGLRDAYLETRDFKGSEEGNTMVPKNCYVNQQEL-----------KPFPFGVRI 237 Query: 224 DHIMLSPEATSLLHSARID-----TKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQN 277 D+++ + S + P T SDH ++ +L + +Q +++ Sbjct: 238 DYMLY-KAVSGFYISCKSLETTTGNDPYSGTPLSDHEALMATLFVRHSPPQQSPNSTHR 295 >gi|71989539|ref|NP_001021585.1| EXOnuclease family member (exo-3) [Caenorhabditis elegans] gi|62553978|emb|CAI79211.1| C. elegans protein R09B3.1b, confirmed by transcript evidence [Caenorhabditis elegans] Length = 186 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 27/107 (25%), Positives = 46/107 (42%), Gaps = 10/107 (9%) Query: 5 TVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH-----I 57 WNV +RA + + E PD++ L ETK ++ +P E ++ + + Sbjct: 35 KFVCWNVAGLRACVKKSDFKEVLAEE-PDLVFLGETKCKE--WPPEMEETFKNYTKTLVV 91 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 T Y GV +LSK P+++ + + D R I A F+ Sbjct: 92 STEKNGGYAGVGLLSKCAPMKVHKGIGDPEFDTAGRLIIAEFSKFYF 138 >gi|284034261|ref|YP_003384192.1| endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836] gi|283813554|gb|ADB35393.1| Endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836] Length = 252 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 35/276 (12%), Positives = 73/276 (26%), Gaps = 36/276 (13%) Query: 1 MSV-VTVATWNV-NSIRARIHNLAAW-IKEN---------NPDIICLQETKTEDKNFPFE 48 MS+ + VAT+N+ NS + +W ++ + +++ LQE P + Sbjct: 1 MSLQLRVATFNIRNS--SAQDGDNSWPVRREVAVAAIAALDAEVVGLQEV------LPDQ 52 Query: 49 TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108 + + + + + + +V + R++ A Sbjct: 53 LADLRTAYPDWTIVGAGRDDGVAAGEHSVVMVRPGDWSVESDETRWLSADPATPGSVGW- 111 Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168 + + L E + Sbjct: 112 DAELTRIATLVRLRHVSGVRVGVLNTHYDHVGELAQVESSRLLDRWAAAEPDRPW----- 166 Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 + + ++ D+ + G RIDHI++ Sbjct: 167 ----VLLGDFNAEPGSPPLQVLTEAGWTDAIPAAAGGTWHDFTGAT----DGQRIDHILV 218 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 S + A + PSDH PV +L +P Sbjct: 219 SKPW--QVVEAAVSYHRPANRLPSDHWPVAATLHLP 252 >gi|154270051|ref|XP_001535895.1| hypothetical protein HCAG_09198 [Ajellomyces capsulatus NAm1] gi|150412984|gb|EDN08368.1| predicted protein [Ajellomyces capsulatus NAm1] Length = 841 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 30/254 (11%), Positives = 62/254 (24%), Gaps = 30/254 (11%) Query: 27 ENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGD 86 E+ D+I +QE +S + + + + Sbjct: 11 EDKYDVIAVQEPSRNPHMLATHCPRSCGFWPAYHPETHP---RVCFLVNKRLVEHTWECH 67 Query: 87 DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEE 146 + T + + P G + + ++ + L + Sbjct: 68 YHSEYIAVLTITTDLGKVQIVNVYAPPPGGYSSEPEESPIGQLQEVAGMGTDAELVILGD 127 Query: 147 PLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYS 206 + + + + D + T + Sbjct: 128 LNVHHERWGGVRVERNFRMAWQLI-------------------AQVDRLGLQLATPVGAT 168 Query: 207 FWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEP 266 W G ID LSP L I + K SDH P+ +L++ Sbjct: 169 TWQDRGSP-----GTTIDLTFLSPLLHDKLRRCAIAEEA---CKGSDHKPIETTLELTPI 220 Query: 267 RKKQQDSTSQNMKP 280 K+ + +N +P Sbjct: 221 PKEAERRNWKNAEP 234 >gi|148654035|ref|YP_001281128.1| endonuclease/exonuclease/phosphatase [Psychrobacter sp. PRwf-1] gi|148573119|gb|ABQ95178.1| Endonuclease/exonuclease/phosphatase [Psychrobacter sp. PRwf-1] Length = 251 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 39/270 (14%), Positives = 83/270 (30%), Gaps = 31/270 (11%) Query: 2 SVVTVATWNV-------NSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + +T+ T+N+ N R + + +K+ +PDI+CLQE + ++ L+ + Sbjct: 5 NSITITTYNIHKGMSPLN--RQVVTKQIGMALKDLHPDILCLQEVQGQN-------LKRM 55 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 + E Q + + ++ + + I L Sbjct: 56 VKYNEYPNQSQHEWFGEYLNCAHSY-GKNCEYENGHHGNAVLSRHPLDPKHNVNITVNKL 114 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + L LE + + + D P+I D Sbjct: 115 EQRGVLHCEVLPLGWPEPVVVLCAHLNLLENDRQKQYRAIAEYVNDTIDQSRPLILAGDF 174 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 +V + + T+A H ++ +K + +D I + Sbjct: 175 NDWKKVSC-QRLAHELNMTEAFMQKHKKLLP-TYP-------AKLPVLSLDRIYV-RNL- 223 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + A + W++ SDH P+ L + Sbjct: 224 -KVKRAWVHKGK-PWSELSDHLPISAELSL 251 >gi|297569596|ref|YP_003690940.1| Endonuclease/exonuclease/phosphatase [Desulfurivibrio alkaliphilus AHT2] gi|296925511|gb|ADH86321.1| Endonuclease/exonuclease/phosphatase [Desulfurivibrio alkaliphilus AHT2] Length = 248 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 34/276 (12%), Positives = 75/276 (27%), Gaps = 47/276 (17%) Query: 4 VTVATWNVNSIRA-------RIHNLAAWIKENNPDIICLQET-----KTEDKNFPFETLQ 51 + V ++N++ RA R +A IK + PD++ LQE ++ + + E Sbjct: 3 LRVMSYNIH--RAIGVDRLFRPERIARIIKHHEPDLLLLQEVDVGVPRSRNLDLAEELAG 60 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 Y ++ L+K + + Sbjct: 61 LCGY-----PHRALGLNVALTKGHYGNATLSRFPIVAERNIDLTLPGHKARGCLYTALEI 115 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 +G ++ + L F + ++ + + P + Sbjct: 116 PESNGKSRPLAVFN-----LHLGLSFNERPRQVGNLVKTPEFAALAPDDPCIVGGDFNDW 170 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 + + + ++ + T+ +S +D I + Sbjct: 171 FTRLSPMFTEVMDFKCASSHQEDFQSPYLTYPSFS----PTGG--------LDKIFVRGP 218 Query: 232 ATSLLHSARIDTKPRGWTK----PSDHTPVIVSLDI 263 I + R + SDH PV+ LD Sbjct: 219 FA-------IVKRQRCRMQISKIASDHLPVLADLDW 247 >gi|312891039|ref|ZP_07750563.1| Endonuclease/exonuclease/phosphatase [Mucilaginibacter paludis DSM 18603] gi|311296506|gb|EFQ73651.1| Endonuclease/exonuclease/phosphatase [Mucilaginibacter paludis DSM 18603] Length = 279 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 37/244 (15%), Positives = 68/244 (27%), Gaps = 19/244 (7%) Query: 23 AWIKENNPDIICLQE-TKTEDKNFPFETLQSLNYHIETCGQKSYNGVA-ILSKYQPIEIV 80 A I+ + DI QE K + + + Y + K + I K +++ Sbjct: 52 ALIRFHQFDIFGTQEGLKNQLNDISNALPEYQRYGLGRDDGKDGGEHSAIFFKKYRFKLL 111 Query: 81 THLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQ 140 + + + L + ++ + R S Sbjct: 112 KKGDFWLSETPDKPGLGWDATCCNRICSWVCLLDKVSKKKFYFFNAHFDHQGKIARQESA 171 Query: 141 RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHD 200 +L L+ AG+ I + D E + D Sbjct: 172 KLVLKMIKQIAGNEKAI-----------FTGDLNGDHESSWYQLLASSNYLVDTFA---Q 217 Query: 201 THHLYSFW-DYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 Y+F + N IDHI + + + I T PSDH PV+ Sbjct: 218 AKQPYTFNASFNGFGKELNGNGIIDHIFTTG--KADVKRWGILTDSYHGKYPSDHFPVLA 275 Query: 260 SLDI 263 +++ Sbjct: 276 EVNL 279 >gi|304316058|ref|YP_003851203.1| endonuclease/exonuclease/phosphatase [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302777560|gb|ADL68119.1| Endonuclease/exonuclease/phosphatase [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 232 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 43/263 (16%), Positives = 87/263 (33%), Gaps = 45/263 (17%) Query: 3 VVTVATWNVNS---I--RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57 ++T+ T+N++ I I+ ++ +IK++ D+I LQE +T +Y + Sbjct: 2 ILTIMTYNIHGGKDIDDNLTIYGISNFIKQSKADVIGLQEV---------DTYLGRSYFL 52 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 + + I+I G+ + + ++ G Sbjct: 53 NEIKYLAKRLKMYYAFGPNIKIGLGSFGNGILSRYPIVKKN----------NYHLTSTGE 102 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 ++ ++ F + L L I+ P+I D T Sbjct: 103 RRGVLSVLIELDSYRKIW-FLTTHLGLNSKERVIQSQEILKIIKRLDYPVILTGDFNETP 161 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA-TSLL 236 E +++ + ++ A A D ++ Y +RID+IM S + + Sbjct: 162 EN-EAYSIINHVLVDGAFSANSD------YYSYLDGDEP----VRIDYIMHSKDISVESI 210 Query: 237 HSARIDTKPRGWTKPSDHTPVIV 259 + SDH PVI Sbjct: 211 KAVD--------CNLSDHFPVIA 225 >gi|3021428|emb|CAA10995.1| neutral sphingomyelinase [Homo sapiens] Length = 423 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 44/297 (14%), Positives = 90/297 (30%), Gaps = 37/297 (12%) Query: 4 VTVATWNVNSI------RA-RIHNLAAWIKENNPDIICLQETKT-EDKNFPFETLQS-LN 54 + + N I RA R+ L ++ + + D+ L+E + +D + + L Sbjct: 9 LRIFNLNCWGIPYLSKHRADRMRRLGDFLNQESFDLALLEEVWSEQDFQYLRQKLSPTYP 68 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN---- 110 +G+ + SK+ E+ H+ + F+ L + + Sbjct: 69 AAHHFRSGIIGSGLCVFSKHPIQELTQHIYTLNGYPYMIHHGDWFSGKAVGLLVLHLSGM 128 Query: 111 -------LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 N +++ +F + + ++ GD N+ P+ C Sbjct: 129 VLNAYVTHLHAEYNRQKDIYLAHRVAQAWELAQFIHHTSKKADVVLLCGDLNMHPEDLGC 188 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223 W LE R + G+RI Sbjct: 189 CLLKEWTGLHDAYLETRDFKGSEEGNTMVPKNCYVSQQEL-----------KPFPFGVRI 237 Query: 224 DHIM---LSPEATSLLHSARIDT--KPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTS 275 D+++ +S S T P T SDH ++ +L + +Q S++ Sbjct: 238 DYVLYKAVS-GFYISCKSFETTTGFDPHSGTPLSDHEALMATLFVRHSPPQQNPSST 293 >gi|290961878|ref|YP_003493060.1| hydrolase [Streptomyces scabiei 87.22] gi|260651404|emb|CBG74526.1| putative hydrolase [Streptomyces scabiei 87.22] Length = 489 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 40/276 (14%), Positives = 67/276 (24%), Gaps = 34/276 (12%) Query: 4 VTVATWNVN--SIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 + V TWN+ R R H I E D++ LQET E +L ++ Sbjct: 222 LRVMTWNLWHGGTRVRDHRAKQLEVITETGADVVGLQETYGTAA---RELADALGWY--- 275 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 + PI P A T + + + H + Sbjct: 276 --HHQAGDNLGIISRHPITARFGDPDVGFYGAAGVRVRTGSGAEVDV-----WTVHLDYK 328 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDY-NIIPQPHDCYNPIIWENDACFTLE 178 Y+ ++ A + + L + +P D Sbjct: 329 PYGPYEAAFDGLEAAELIAHEEVRLAQLRDCLRRIDGSVPVVLVGDFNSPSHLDRPDVDW 388 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI-----RIDHIMLSPEAT 233 + + + W G RID ++ T Sbjct: 389 PVTLAAETAGLRDSYREAHPDPVRQPGHTWSPIHVEHEDGSGRPEPQDRIDFVL-HRGLT 447 Query: 234 SLLHSARID--------TKPRGWTKPSDHTPVIVSL 261 + +R PSDH VI + Sbjct: 448 --VLDSRTCVSGTPRPWPDVEDNDWPSDHAAVITTF 481 >gi|206974292|ref|ZP_03235209.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus H3081.97] gi|217957955|ref|YP_002336499.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus AH187] gi|222094154|ref|YP_002528211.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus Q1] gi|229137219|ref|ZP_04265836.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST26] gi|206747532|gb|EDZ58922.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus H3081.97] gi|217066613|gb|ACJ80863.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus AH187] gi|221238209|gb|ACM10919.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus Q1] gi|228646214|gb|EEL02431.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST26] Length = 263 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 34/271 (12%), Positives = 63/271 (23%), Gaps = 19/271 (7%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET------KTEDKNFPFETLQS 52 + + T N +S + +I LA I+E D+I LQE K N + Sbjct: 1 MKLLTLNCHSWQEENQIEKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGL 60 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 L + + ++ + F + Sbjct: 61 LLLEELKALHVKDYNITWDFSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTAYWKTR 120 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 I + + ++ + + Sbjct: 121 KIVSATIAYNGKNITFYSCHLGWWNDEEESFKDQVNRLMERVDSNELSFLMGDFNNNARL 180 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 E G + WD +RID I+ + Sbjct: 181 QGEGYEYMMQKGLYDTYGLAIEKDEGTTVQGEIAGWD------ENKHNLRIDLILCNRS- 233 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + S+++ SDH V V +DI Sbjct: 234 -EKVCSSKVIFNGTNRNIISDHFGVEVQVDI 263 >gi|42565086|ref|NP_188790.2| endonuclease/exonuclease/phosphatase family protein [Arabidopsis thaliana] gi|11994389|dbj|BAB02348.1| unnamed protein product [Arabidopsis thaliana] gi|51971657|dbj|BAD44493.1| unknown protein [Arabidopsis thaliana] Length = 458 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 86/268 (32%), Gaps = 27/268 (10%) Query: 12 NSIRARIHNLAAWIKENNPDIICLQETKTEDKNF--PFETLQ-SLNY-HIETCGQKSYNG 67 N +R ++A ++E + DI+ LQ+ K E++ P L +L ++ G Sbjct: 173 NGYSSR-RSIAELLRELDADILALQDVKAEEETLMKPLSDLASALGMKYVFAESWAPEYG 231 Query: 68 VAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDK 127 AILSK+ + D D + + + L H + K D Sbjct: 232 NAILSKWPIKKWRVQRIADVDDFRNVLKVTVEIPWAGDVNVYCTQLDHLDENWRMKQIDA 291 Query: 128 ISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQ 187 I+ + L + DY+I H +EV + + Sbjct: 292 ITRGDE----SPHILLGGLNSLDGSDYSIARWNHIVKYYED-SGKPTPRVEVMRFLKGKG 346 Query: 188 NMGFTDAIRATHDTHHLYSFWDYYADSWSKN------KGIRIDHIMLSPEATSLLHSARI 241 + + + + +N G R+D+I+ SPE+ Sbjct: 347 YLDSKEFAGECEPVVII---------AKGQNVQGTCKYGTRVDYILASPESPYEFVPGS- 396 Query: 242 DTKPRGWTKPSDHTPVIVSLDIPEPRKK 269 SDH V V L I + R + Sbjct: 397 -YSVVSSKGTSDHHIVKVDLVITKERSR 423 >gi|222150529|ref|YP_002559682.1| hypothetical protein MCCL_0279 [Macrococcus caseolyticus JCSC5402] gi|222119651|dbj|BAH16986.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402] Length = 273 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 41/284 (14%), Positives = 77/284 (27%), Gaps = 35/284 (12%) Query: 4 VTVATWNVNSIRARIHN--------LAAWIKENNPDIICLQETKTEDKN----------- 44 + V T N +S + + + A I + + DII LQE +N Sbjct: 1 MKVLTLNTHS---WLEDNQEEKLNVIVARILKADYDIIALQEVNQLSENDVIDAPNNLCP 57 Query: 45 -FPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 ++ N+ E + GV + I + + + + I+ Sbjct: 58 LLDQTPIKEGNFAYEIVEKLRALGVTYYWSFAMSHIGYDIYD-----EGSALLSKTPIDP 112 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLI-FAGDYNIIPQPHD 162 + + P + L + F+ ++N Sbjct: 113 YAVFVSIEESPDDYKSRKILFGKTNVGENEMLAVSCHYSWWMTFAEGFSYEWNNTINALS 172 Query: 163 CYNPIIWENDACFTLEVR--QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG 220 Y E ++ + D ++ A W N G Sbjct: 173 HYELPKLLMGDFNNPEGTEGYAYVLKSDANIQDTYTVAKKRTGSHTIEKNIAG-WEDNDG 231 Query: 221 -IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +RID I +PE + R SDH V +++ Sbjct: 232 KLRIDFIFSTPEF--KVLHHGTVFDGRTEAIVSDHFGVEAEIEL 273 >gi|157877592|ref|XP_001687113.1| endonuclease/exonuclease protein-like protein [Leishmania major] gi|68130188|emb|CAJ09499.1| endonuclease/exonuclease protein-like protein [Leishmania major strain Friedlin] Length = 735 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 7/43 (16%) Query: 4 VTVATWNVNS-------IRARIHNLAAWIKENNPDIICLQETK 39 + + +WNV IR R ++ + DIICLQE K Sbjct: 1 MFLISWNVAGWSSTSQAIRERFGSIHDFFACTEADIICLQECK 43 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 8/37 (21%), Positives = 17/37 (45%) Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 Y+ WD + +N+G R+D+I++ + Sbjct: 472 CPCPYTCWDQSRNRRLENEGTRLDYILVDSALLPAVV 508 >gi|256395196|ref|YP_003116760.1| endonuclease/exonuclease/phosphatase [Catenulispora acidiphila DSM 44928] gi|256361422|gb|ACU74919.1| Endonuclease/exonuclease/phosphatase [Catenulispora acidiphila DSM 44928] Length = 236 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 31/264 (11%), Positives = 68/264 (25%), Gaps = 35/264 (13%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 V + T+NV S+R LA ++ PD++C+QE Sbjct: 4 TVRILTYNVRSLRDDRAALARVVRSCAPDVVCVQE-------------------SPRFFG 44 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 + + + + + A L Y G + + Sbjct: 45 WQRAARTMAASFGLSVVAGGANASGNLLLAGPNVEVDAAEVLYLEHKRGYHLRGMALAAL 104 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + + + + G + + D + Sbjct: 105 RIGASRFTVASTHLSMNLEQRVHQAGEVLGHL-DGFAERNQTTSRVLAGDFNSYPGSVEW 163 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 + + + ++ + + R+D + +S + + A + Sbjct: 164 GILTERLADAWMVS---PMGDEFT--STGPNPYQ-----RLDAVFVSRDVD--VVRAGVP 211 Query: 243 TKPRGWTK---PSDHTPVIVSLDI 263 T SDH PV+ L I Sbjct: 212 TDLIAKADEALASDHRPVLAVLRI 235 >gi|260598074|ref|YP_003210645.1| hypothetical protein CTU_22820 [Cronobacter turicensis z3032] gi|260217251|emb|CBA31170.1| hypothetical protein CTU_22820 [Cronobacter turicensis z3032] Length = 370 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 38/263 (14%), Positives = 73/263 (27%), Gaps = 32/263 (12%) Query: 22 AAWIKENNPDIICLQETKTEDK--NFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEI 79 A + + N D++ + E ++ F E + +L S+ + + Sbjct: 119 AKVMSDLNADVLAVVEAESRPALAAFNQEIIAALGGEPFRHVMVIDGND---SRGIDVGL 175 Query: 80 VTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFAS 139 +T +++ + R Y + K + A Sbjct: 176 LTGAEYPIGPMRSHVDDRDARGQLIFSRDCPEYSVPLANGDTLWVMVNHLKSKGYGGKAE 235 Query: 140 QRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH 199 + D + I D T E L+ DA Sbjct: 236 SDARRKAQAQRVADIYKARRDAGE-QFIAIAGDFNDTPESDTLAPLLKETDLRDAFTHPA 294 Query: 200 DTHHLY--SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRG-WTKP----- 251 + Y ++ +S NK +D+I+LSP + + + K +P Sbjct: 295 FDNGGYPGTW----GNSAKNNK---LDYILLSPALWERVTAGGVIRKGMWPGERPVKWDV 347 Query: 252 -----------SDHTPVIVSLDI 263 SDH + V L+I Sbjct: 348 YPELKKPQQAGSDHAALWVDLNI 370 >gi|257458602|ref|ZP_05623737.1| endonuclease/exonuclease/phosphatase family protein [Treponema vincentii ATCC 35580] gi|257444036|gb|EEV19144.1| endonuclease/exonuclease/phosphatase family protein [Treponema vincentii ATCC 35580] Length = 260 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 32/274 (11%), Positives = 73/274 (26%), Gaps = 29/274 (10%) Query: 4 VTVATWNVNSIRARIHNL----AAWI--KENNPDIICLQETKTEDKNFPFETLQSLNY-- 55 + + TWN + L AA++ N DI +QE + E + L Sbjct: 1 MKICTWN------CRYGLTFEKAAYLCQAGYNADIYAIQEYDMRNNKPIHEIEKHLGQLQ 54 Query: 56 ------HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 +S + + I + T ++ + Sbjct: 55 DKYGDGREYKDNAESGGDLGLALFSNTYRIERIYSNTIPYRYVVPYKVTCKETNESFTLI 114 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 +++ + + K D + I +L + E + Sbjct: 115 HVWTKIADLEANQKQDYIMQVIGALENPTYNKLLIPEDNKALWIGDFNSSMQLKNEIDKN 174 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 + + + + + + ++F Y + + D+I Sbjct: 175 NHT----RFLETMKKYGLVSAYHTNRQKKYGKEDQFTFIGTYRNGQQRFFN---DYIFYH 227 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + + I ++ SDH PV+ L + Sbjct: 228 HD-RFKCKTVTIGRFNT-FSFFSDHCPVLAELQL 259 >gi|255013349|ref|ZP_05285475.1| hypothetical protein B2_05535 [Bacteroides sp. 2_1_7] gi|298376689|ref|ZP_06986644.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_19] gi|298266567|gb|EFI08225.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_19] Length = 281 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 34/282 (12%), Positives = 78/282 (27%), Gaps = 54/282 (19%) Query: 3 VVTVATWNV------NSIRARIHN---LAAWIKENNPDIICLQE---------TKTEDKN 44 V+ +AT+N+ + A H + I+ D+ QE + D Sbjct: 25 VLKIATFNLRMDTPSDGENAWFHRKDMVNDLIRFYGFDLFGTQEGFTHQLNDILRLSDYR 84 Query: 45 FP---FETLQSLNYHIETCGQKSYNGV----AILSKYQPIEIVTHLPGDDLDVQARFIEA 97 F + + H + V P + G + + + Sbjct: 85 FIGVGRDDGKDAGEHCAIFYRSDRFKVLDQGDFWLSEHPEKPGRGWDGTCCNRICTWGKF 144 Query: 98 TFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII 157 N + N++ + + + + + + + + Sbjct: 145 EDLKNHKQFYFFNVHYEYEGDVARRESSNLMISRIKSIAGNQPVFLTGDF---------- 194 Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK 217 +A T E + + + I + ++ Y + ++ Sbjct: 195 --------------NAFPTEEPIRILNDSGFLNDSYKITKEAPFGPVCTYHGYDSTIKTE 240 Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 R+D+I ++ + + T PSDH PV+V Sbjct: 241 E---RLDYIWVTDSI--QIDKYGVLTNTLYGHTPSDHFPVMV 277 >gi|146308751|ref|YP_001189216.1| endonuclease/exonuclease/phosphatase [Pseudomonas mendocina ymp] gi|145576952|gb|ABP86484.1| Endonuclease/exonuclease/phosphatase [Pseudomonas mendocina ymp] Length = 362 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 41/317 (12%), Positives = 78/317 (24%), Gaps = 61/317 (19%) Query: 4 VTVATWNV---NSIR-----------------------ARIHNLAAWIKENNPDIICLQE 37 + V TWNV R A + + +++ PD++ LQE Sbjct: 54 LKVMTWNVQYLAGKRHVFWYDLPGGDGPDERPSSDDLAATLDEVVRVLRDEQPDLVLLQE 113 Query: 38 T----KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR 93 K D LQ + C +++ A + I + L Sbjct: 114 LHDGAKASDYQDQLALLQERLADLYPCSSQAFYWKAAFVPHPRILGSVGMKLGTLSRFQI 173 Query: 94 FIEATFTINTQT-------------LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQ 140 + L + +L + G + + Sbjct: 174 ARAERLQLPEIPSDPLSRQFQLKRALLVSHLPIRGGGELVAINTHFDAFAQGDDTMRRQV 233 Query: 141 RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH- 199 ++ P ++ E ++ + + A R Sbjct: 234 QMTDALLQQLQA--GASPWILGGDLNLLPPGQFQHLPENQRGWYAADSELQDLAGRYPMI 291 Query: 200 ---------DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 Y+ + + ++ +D++ SP T R G Sbjct: 292 PSLQQASGAQQAQWYTHYPNDPAASGPDRT--LDYLFYSPRLTPFASQVR-QHDTLGI-- 346 Query: 251 PSDHTPVIVSLDIPEPR 267 SDH PVI +P Sbjct: 347 -SDHLPVIGRFFLPSEE 362 >gi|293571332|ref|ZP_06682364.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecium E980] gi|291608597|gb|EFF37887.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecium E980] Length = 274 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 40/282 (14%), Positives = 74/282 (26%), Gaps = 31/282 (10%) Query: 4 VTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQET--KTEDKNFPFETLQSLNY- 55 + + T N +S + ++ +A I D+I LQE + K E L++ + Sbjct: 1 MKIMTLNTHSWLEEEPQEKLKQIAQKICHEQYDVIALQEVNQTMDAKGLTSEQLKNFSQV 60 Query: 56 ---------HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 + C + + + + + Sbjct: 61 QEQTPVRSDNFAYCLIQLLAEQGETYYWSWEMSHIGYAIYEEGNALLSKQPLTSQTHLVS 120 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 H I + K I S ++ + F Sbjct: 121 ETKEKEDYHTRKILVGQTSVKTQCITVASCHFSWWVDEKSGFAFEWKELEASLAPLTTPL 180 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK-GIRIDH 225 + + + DA + + D W NK G+RID+ Sbjct: 181 YLLGDFNNPAEGSGYDLVAKSQLPIRDAYPIAQKKQAEAT-IEKRIDGWENNKEGLRIDY 239 Query: 226 IMLSPEATSLLHSARIDTKPR---GWTKP--SDHTPVIVSLD 262 I + + + R G P SDH V V+L+ Sbjct: 240 IYVP-------QDCFVTSYQRIFDGENGPIVSDHYGVAVTLE 274 >gi|12652591|gb|AAH00038.1| Sphingomyelin phosphodiesterase 2, neutral membrane (neutral sphingomyelinase) [Homo sapiens] gi|119568731|gb|EAW48346.1| sphingomyelin phosphodiesterase 2, neutral membrane (neutral sphingomyelinase) [Homo sapiens] gi|123981952|gb|ABM82805.1| sphingomyelin phosphodiesterase 2, neutral membrane (neutral sphingomyelinase) [synthetic construct] gi|312151710|gb|ADQ32367.1| sphingomyelin phosphodiesterase 2, neutral membrane (neutral sphingomyelinase) [synthetic construct] Length = 423 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 44/297 (14%), Positives = 90/297 (30%), Gaps = 37/297 (12%) Query: 4 VTVATWNVNSI------RA-RIHNLAAWIKENNPDIICLQETKT-EDKNFPFETLQS-LN 54 + + N I RA R+ L ++ + + D+ L+E + +D + + L Sbjct: 9 LRIFNLNCWGIPYLSKHRADRMRRLGDFLNQESFDLALLEEVWSEQDFQYLRQKLSPTYP 68 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN---- 110 +G+ + SK+ E+ H+ + F+ L + + Sbjct: 69 AAHHFRSGIIGSGLCVFSKHPIQELTQHIYTLNGYPYMIHHGDWFSGKAVGLLVLHLSGM 128 Query: 111 -------LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 N +++ +F + + ++ GD N+ P+ C Sbjct: 129 VLNAYVTHLHAEYNRQKDIYLAHRVAQAWELAQFIHHTSKKADVVLLCGDLNMHPEDLGC 188 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223 W LE R + G+RI Sbjct: 189 CLLKEWTGLHDAYLETRDFKGSEEGNTMVPKNCYVSQQEL-----------KPFPFGVRI 237 Query: 224 DHIM---LSPEATSLLHSARIDT--KPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTS 275 D+++ +S S T P T SDH ++ +L + +Q S++ Sbjct: 238 DYVLYKAVS-GFYISCKSFETTTGFDPHSGTPLSDHEALMATLFVRHSPPQQNPSST 293 >gi|294673423|ref|YP_003574039.1| endonuclease/exonuclease/phosphatase family protein [Prevotella ruminicola 23] gi|294471767|gb|ADE81156.1| endonuclease/exonuclease/phosphatase family protein [Prevotella ruminicola 23] Length = 358 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 39/276 (14%), Positives = 75/276 (27%), Gaps = 32/276 (11%) Query: 4 VTVATWNVN-------SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56 + +AT+NV ++ + +K+ D+ C QE D++ + S + Sbjct: 105 IKIATYNVAMFGRETSGF--IAQDILSEMKKQKVDVACFQEY--NDQSGDKKNSDSYKEY 160 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 Q ++ V IV + + A +R+ N +L Sbjct: 161 FPYMAQGEHDMVIYSRY----PIVKSKNMNFEMTNNSAMWAEVNYKGTVIRVYNAHLETT 216 Query: 117 NPITSTKYD---DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + + A D N Sbjct: 217 GINGTMYRAGKLMSQGMDIESNALLRALYGNYTIGMIARSGQANVLAQDMRNCERPIIVC 276 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 +V S+ +G + +Y+F +RID+I Sbjct: 277 GDFNDVPYSYVYNTMLGDKVDGFTECGSGFMYTF---RGGKKK----VRIDYIFHDKTFL 329 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKK 269 + + SDH PV + IP+ ++K Sbjct: 330 G-------LSYYKRELSYSDHNPVFSKIQIPQDQQK 358 >gi|260901207|ref|ZP_05909602.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus AQ4037] gi|308106699|gb|EFO44239.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus AQ4037] Length = 442 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 42/283 (14%), Positives = 81/283 (28%), Gaps = 43/283 (15%) Query: 4 VTVATWNVNSIRA-------RIHNLAAWIKENNPDIICLQETKTE-DKNFPFETLQSLNY 55 + + T+N+ ++ A R + +IK D++ LQE F E + Y Sbjct: 178 LKLMTYNIWALPAIASHIGERYELIPDYIK--GYDVLALQEVFASGRDAFLRELAKDYPY 235 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + + +N + + + I H Sbjct: 236 QTKMLDKDGFNVYDGGVVIVSRYPIVNEAQYVFPDCSGTDCFADKGVNYAEIIKGGQAYH 295 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + +D + R +F R A NI Y+ N Sbjct: 296 VFATHTASFDTDTAREYRQRQFQQMR-------TMAQSLNIPNNETVVYSGDFNVNK--- 345 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYS--FWDYYADSWS-------KNKGIRIDHI 226 + A + Y+ +D ++++ +N +D++ Sbjct: 346 ------LKFPGDYQQMIANLSAMEPQYSGYTASTFDPRINNFAGEALSGGENVEY-LDYV 398 Query: 227 MLSPEA-TSLLHSARID---TKPRGWTKP---SDHTPVIVSLD 262 M+S E + R+D + G K SDH PV + Sbjct: 399 MVSNEYGVKSFNDNRVDVPRSTAEGLWKHYNLSDHFPVSAVIK 441 >gi|225427417|ref|XP_002264301.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1549 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 34/264 (12%), Positives = 70/264 (26%), Gaps = 35/264 (13%) Query: 2 SVVTVATWNVNSI----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57 ++ +WN + R+ L ++E P++I L ET E LNY Sbjct: 359 RTMSCLSWNCRGLGGLETVRL--LTNLVREKKPEVIFLIETFCTSARI-SEIANKLNYE- 414 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 S + G + + + Sbjct: 415 -------------GSYGVNCRGHSAGLGLIWRCKDKVTILGSHDRYIDAIVTLENQRMFR 461 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 ++ + + P GD+N + + Sbjct: 462 LTGFYGLANRSQRSSSWEILRNLHAAHSLPWCVIGDFNELMHQSEKCGNHPHPGSLIEAF 521 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 + L ++G+ Y++ ++ R+D ++S + L H Sbjct: 522 RQVVTNCGLSDLGYVGY---------AYTW--ERGRGTTRWVEERLDRALVSADWKHLFH 570 Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261 + + SDH PV++ L Sbjct: 571 QS---RLIHLFVSTSDHLPVLLEL 591 >gi|313156920|gb|EFR56358.1| putative lipoprotein [Alistipes sp. HGB5] Length = 673 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 41/268 (15%), Positives = 63/268 (23%), Gaps = 39/268 (14%) Query: 21 LAAWIKENNPDIICLQE---TKTEDKNFPFETLQSLN-YHIETCGQKSYNGVAILSKYQP 76 LA I +N DI QE T +++ P Q Y G+ S +GV+ + Sbjct: 75 LAQSIVKNKWDIFGFQEANGT-IQNE-LPTLVGQQGGKYEWWFVGRDSQDGVSGEALGIA 132 Query: 77 IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRF-- 134 D + L + + Sbjct: 133 YNPDRFELTDKHFFWISPTPDEMSYGWDELGYHRIAACAMVTDKLYNKQFFMMVTHAPLG 192 Query: 135 -----------LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + P I GD N ND+ T+E Sbjct: 193 ATARAEGAKLLIEREKMYNPDGIPSILVGDMNAAMDDASSKTLRTHWNDSFLTVESDFVS 252 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + RID+I + L S ++D Sbjct: 253 GPVGTFNGHKITADLTQATA------------------RIDYIYSRGDVE--LKSYKVDN 292 Query: 244 KPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271 G PSDH P+ + D + Sbjct: 293 TVYGNIYPSDHCPLTIQFDTDYEKPAPD 320 >gi|241766052|ref|ZP_04763968.1| Endonuclease/exonuclease/phosphatase [Acidovorax delafieldii 2AN] gi|241363933|gb|EER59221.1| Endonuclease/exonuclease/phosphatase [Acidovorax delafieldii 2AN] Length = 249 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 42/284 (14%), Positives = 89/284 (31%), Gaps = 67/284 (23%) Query: 3 VVTVATWNVN----SI----RARIHNLAAWIKENNPDIICLQET-KTE----------DK 43 ++ VAT+N++ I R IHNL +++ + DI+CLQE K Sbjct: 10 ILRVATYNIHKGVQGIGPARRLEIHNLGLAVEQLDADIVCLQEVRKVHRREAAYFERWPD 69 Query: 44 NFPFETLQSLNYHIET----CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF 99 E L Y + +G A+LS++ I D Q + Sbjct: 70 VPQAEYLAPEGYEAVYRTNAFTRHGEHGNALLSRWPVIGHQHEDISDHRFEQRGLLHVEL 129 Query: 100 TINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159 + + + + ++L + + +I+R + S + + + + Sbjct: 130 DAHGRRVHVIVVHLGLIPGSRVRQVERLQQFIEREVPTGSPVVVAGDFNDWGLQIKRMLS 189 Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK 219 Y D +++ ++ Sbjct: 190 GFGLYEF---------------------------------DAPRAFTYP-------ARLP 209 Query: 220 GIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +++DH+ + + + + R W + SDH P+I + Sbjct: 210 LVQLDHVYV-RGLSPIGLHV---PRGRIWWRMSDHLPLIAEFRL 249 >gi|147792395|emb|CAN70278.1| hypothetical protein VITISV_015612 [Vitis vinifera] Length = 853 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 25/213 (11%), Positives = 58/213 (27%), Gaps = 19/213 (8%) Query: 5 TVATWNVNSIRARIHN--LAAWIKENNPDIICLQETK--TEDKNFPFETLQSLNYHI--- 57 + +WN + +R + ++ NPD++ LQE+K D+ F + + Sbjct: 378 KILSWNTRGLGSRKKRRTVRRFLSTQNPDVVMLQESKREIWDRRFVSSVWKGRSLEWAAL 437 Query: 58 ------------ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT 105 + + S +++ + G Sbjct: 438 PACGASGGILILWDSIKFKCTEKVLGSFSVTVKLNSDEKGSFWLTSVYGPNKPLWRKDFW 497 Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165 L + +LY I I + + + + F + ++ P Sbjct: 498 LELQDLYGLTFPRWCVGGDFKVIRRISEKMXDSRLTVNMRCFDEFIRESGLLDPPLRNAA 557 Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT 198 +EN E ++ F+ + Sbjct: 558 FTWFENMWLLHPEFKEKFRDWWQECTVEGWEGH 590 >gi|71895533|ref|NP_001026218.1| protein angel homolog 2 [Gallus gallus] gi|53127786|emb|CAG31222.1| hypothetical protein RCJMB04_3g5 [Gallus gallus] Length = 558 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 18/108 (16%), Positives = 35/108 (32%), Gaps = 5/108 (4%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73 R N+ IK+ + D++CLQE ++ ++ E L+SL YH E + Sbjct: 212 RFPNILQEIKQLDADVLCLQEV--QEDHYRKEIKSSLESLGYHCEYKMRTGRKSDGCAIC 269 Query: 74 YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 ++ + + L + + N Sbjct: 270 FKTSKFSLISSNPVEFFRRDIPLLDRDNVGLVLLLQPKFPCKTNAAIC 317 >gi|307323928|ref|ZP_07603137.1| Endonuclease/exonuclease/phosphatase [Streptomyces violaceusniger Tu 4113] gi|306890377|gb|EFN21354.1| Endonuclease/exonuclease/phosphatase [Streptomyces violaceusniger Tu 4113] Length = 303 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 37/268 (13%), Positives = 72/268 (26%), Gaps = 24/268 (8%) Query: 6 VATWNV--------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57 V T+N+ NS R + ++ P ++ QE + L Sbjct: 50 VMTFNLRYAGDSEPNSWGRRRPVMRELLRRARPHLLGTQE--GLYGQL-RDIAHDLGQRY 106 Query: 58 ETCGQKSYNGVA--ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 G G ++ + + + D + + ++ Sbjct: 107 AWIGTGRMGGSRDEFMAVFYDTGRLEPVEYDHFWLSDTPNVIGSNTWGGAVVRMVTWVRF 166 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + T ++ + + + A G + +P+ + + Sbjct: 167 HDRRTGEEFYALNTHLDHRSQNARDHAAALITERLGGLDSALPRIVTGDFNVAAHGN--- 223 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 + D + + + G RID I+ SP Sbjct: 224 -PVYDAMLHGGTLVDSWDTAERRGPLYGTFHGFGPLVPD-----GDRIDWILTSPGV--R 275 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 H A IDT PSDH PV L++ Sbjct: 276 THHAVIDTYSGDGQYPSDHLPVRTVLEL 303 >gi|86358327|ref|YP_470219.1| putative endonuclease/exonuclease/phosphatase family protein [Rhizobium etli CFN 42] gi|86282429|gb|ABC91492.1| putative endonuclease/exonuclease/phosphatase family protein [Rhizobium etli CFN 42] Length = 369 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 24/112 (21%) Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E + + GF + + ++ Y+A + ++D+I LSP + Sbjct: 260 HQPEAESALDVFSHDGFAENVVVRRQPLDRWTL--YHARGPQEQHLCQLDYIWLSPALAA 317 Query: 235 L--------LHSA-----------RIDTKPR-GWTKP--SDHTPVIVSLDIP 264 + + ++ PR GW +P SDH PV+++LD+P Sbjct: 318 HNSGRVPEIIRNGQPYRTVFPPGQEVERYPRTGWDRPKASDHCPVVMTLDLP 369 >gi|7488319|pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana (fragment) Length = 1365 Score = 50.9 bits (120), Expect = 2e-04, Method: Composition-based stats. Identities = 47/258 (18%), Positives = 84/258 (32%), Gaps = 33/258 (12%) Query: 6 VATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 V +WN +R I L K++ PDI+ L ETK ++F ++ L Y + Sbjct: 2 VISWNCQGLRNPWTIRYLKEMKKDHFPDILFLMETK-NSQDFVYKVFCWLGYDFIHTVEP 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 S I +HL + L ++ + + I +Y + Sbjct: 61 E-----GRSGGLAIFWKSHLEIEFLYADKNLMDLQVSSRNKVWFISCVYGLPVTHMRPKL 115 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 ++ S L+ E GD+N I + + E Sbjct: 116 WEHL----------NSIGLKRAEAWCLIGDFNDIRSNDEKLGGPRRSPSSFQCFEHMLLN 165 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + +G T + +++ D W + K +D +P S+ +A Sbjct: 166 CSMHELGS---------TGNSFTWGGNRNDQWVQCK---LDRCFGNPAWFSIFPNA---H 210 Query: 244 KPRGWTKPSDHTPVIVSL 261 + SDH PV+V Sbjct: 211 QWFLEKFGSDHRPVLVKF 228 >gi|29349191|ref|NP_812694.1| hypothetical protein BT_3783 [Bacteroides thetaiotaomicron VPI-5482] gi|29341099|gb|AAO78888.1| putative endonuclease/exonuclease/phosphatase family protein [Bacteroides thetaiotaomicron VPI-5482] Length = 315 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 42/292 (14%), Positives = 78/292 (26%), Gaps = 45/292 (15%) Query: 4 VTVATWNV-----------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52 +TVA++N+ + R +A ++ ++ DI QE E L Sbjct: 27 LTVASYNLRNANGSDSARGDGWGQRYPVIAQMVQYHDFDIFGTQECFLHQLKDMKEALPG 86 Query: 53 LNY-HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 +Y + K + + + L + + Sbjct: 87 YDYIGVGRDDGKDKGEHSAIFYRTDKFDIVEKGDFWLSETPDVPSKGWDAVLPRICSWGH 146 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 + ++ + I + R S L E+ N+ N Sbjct: 147 FKCKDTGFEFLFFNLHMDHIGKKARVESAFLVQEKMKELGRGKNLP------AILTGDFN 200 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 K + + + ++ +D +S+++ RIDHI +SP Sbjct: 201 VDQTHQSYDAFVSKGVLCDSYEKCDYRYALNGTFNNFD--PNSFTE---SRIDHIFVSPS 255 Query: 232 A--------------------TSLLHSA--RIDTKPRGWTKPSDHTPVIVSL 261 + I K PSDH PV V L Sbjct: 256 FHVKRYGVLTDTYRSVRENSKKEDVRDCPEEITIKAYEARTPSDHFPVKVEL 307 >gi|20092035|ref|NP_618110.1| hypothetical protein MA3219 [Methanosarcina acetivorans C2A] gi|19917247|gb|AAM06590.1| predicted protein [Methanosarcina acetivorans C2A] Length = 330 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 36/335 (10%), Positives = 89/335 (26%), Gaps = 80/335 (23%) Query: 4 VTVATWNVNSI-------------RARIHNLAAWIKENNPDIICLQETKTEDK------- 43 + +AT+N+ ++ R + + ++ N DI+CLQE +++ Sbjct: 3 LRIATFNLENLDFQKSNKEPTLEERIAV--MRPQLQRVNADILCLQEVNGQEEVGHPRRL 60 Query: 44 ----------NFPF--------------------------ETLQSLNYHIETCGQKSYNG 67 + E L+ Y Y Sbjct: 61 LALEALLKDTQYASFNRVSTVDEGGSQVYDERNLVILSRCEILEHHQYKHNFASAPLYRI 120 Query: 68 VAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDK 127 V ++ + + + + A+ ++ L + + + Y K Sbjct: 121 VTAIANGGEEQTAKEITWERPILHAKIKVGEKVMDVINLHLKSKIPTYIPGQKLDNYTWK 180 Query: 128 ISWIKRFLRFASQRLELEE----PLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + F S + + ++ +N P +E + Sbjct: 181 TASGWAEGFFISSMKRVGQALEARMLIDDLFNKTENPWIVVCGDFNSEFDDVPVEAIRGR 240 Query: 184 QKLQ---NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + + + + KG +DH+++ + + + Sbjct: 241 VENTGNGELARRIMFPCEMSIPE-----STRFSLYHQGKGNMLDHLLVCRDMLAYYKGSE 295 Query: 241 IDTKPRGWTKP----------SDHTPVIVSLDIPE 265 + + SDH+PVI ++P+ Sbjct: 296 VHNELLHDESIAFATDIKFPESDHSPVIAEFEMPD 330 >gi|288800678|ref|ZP_06406135.1| endonuclease/exonuclease/phosphatase [Prevotella sp. oral taxon 299 str. F0039] gi|288332139|gb|EFC70620.1| endonuclease/exonuclease/phosphatase [Prevotella sp. oral taxon 299 str. F0039] Length = 270 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 37/262 (14%), Positives = 66/262 (25%), Gaps = 29/262 (11%) Query: 4 VTVATWNVNSIRARIHNL-----AAWIKENNPDIICLQET--KTEDKNFPFETLQSLNYH 56 + V T+N IR+ + A ++ DIICL E ++ + + Sbjct: 25 IKVITFN---IRSFEPDFDVAPYAELLRSEEADIICLNEVENRSSRQQRDGKFRD----- 76 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 + + N I + ++ + I ++ + + L Sbjct: 77 VVAELAQKLNMFEIFGYSYNLANKRGEYPEENYRYSLNELYGNAILSRYPILNSNCLQLP 136 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 P S + R+ G Sbjct: 137 RPKGSADQRGVVYADILLPTKKMFRIASTHLDHMGGQLEQAEVLVSDKVYTSSIPMILTG 196 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 + + N T R +D Y S ID I S Sbjct: 197 DMNQGPGSSVINKIETAFERMDNDNG------TYLGLSK-------IDFIFGSKG-KWTF 242 Query: 237 HSARIDTKPRGWTKPSDHTPVI 258 S R+ + + SDH PV+ Sbjct: 243 ESCRVLDRFFNGKELSDHCPVV 264 >gi|171910959|ref|ZP_02926429.1| hypothetical protein VspiD_07285 [Verrucomicrobium spinosum DSM 4136] Length = 300 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 37/277 (13%), Positives = 76/277 (27%), Gaps = 45/277 (16%) Query: 4 VTVATWNVNSI------RA-RIHNLAAWIKENNPDIICLQETKTEDKNFPF-ETLQSLNY 55 + V TWNV + R+ R+ +A + PDI+ QE E + LQ + Sbjct: 54 LRVVTWNVWGLHWITPLRSERLRKVAEEVARLKPDIVGFQEAFVEADRAELTQALQVVGL 113 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 G +L + + + + ++ + L + L L Sbjct: 114 EHSRYFHSGLVGSGLLMVSRYPVLAEGFIRYASNGRPEALQHGDWWAGKGLSLCTLDLGE 173 Query: 116 GNPI--TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 G + +T + + +Q +L + + +N + Sbjct: 174 GRRLSFGNTHLHARYKENRYHATQLAQTAQLIPWVKKVRETGAPALWTGDWNNTPDGDVL 233 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS-PEA 232 +E + R+DH+ S Sbjct: 234 SPLMEAGAWKLLSTDQP-------------------------------RVDHVFGSGEGW 262 Query: 233 TSLLHS-ARIDTKPRGWTK--PSDHTPVIVSLDIPEP 266 + +++ K SDH V V +++ Sbjct: 263 EWQVVDQGKVNGKLESDPTVPWSDHAAVWVDVELRSK 299 >gi|32476790|ref|NP_869784.1| hypothetical protein RB11105 [Rhodopirellula baltica SH 1] gi|32447336|emb|CAD77162.1| probable secreted protein [Rhodopirellula baltica SH 1] Length = 286 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 37/266 (13%), Positives = 74/266 (27%), Gaps = 43/266 (16%) Query: 5 TVATWNV-----NSIRARIHNLAAWIKENNPDIICLQET--KTEDKNFPFETLQSLNYHI 57 V ++N+ N + + A I + PD + LQE + + Q L H+ Sbjct: 54 RVLSYNIKRGYGNDGKTDLPRTADVISKLKPDFVGLQEVDERCNRSG-KVDQAQWLGEHL 112 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 + + +Y + + V+ + + + Sbjct: 113 DMHAAFAPFMDYDGGRYGMAILSRYPIEKTESVELARGREPRVALVAHVTLPDGNKLTLV 172 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + D ++ + L P I GD+N P+ Sbjct: 173 NVHFDYIRDDTVRFEQATKVREFIRSLSNPAILLGDFNDTPE------------------ 214 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 + + + A ++F ID + SPE + Sbjct: 215 ------SRTVQLFQDGFVEADKPADDSFTF-SAEKPDRE------IDFLFASPETQWTVK 261 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263 + + +P SDH PV+ L + Sbjct: 262 TVDVIDEPL----ASDHRPVMAVLQL 283 >gi|256395293|ref|YP_003116857.1| endonuclease/exonuclease/phosphatase [Catenulispora acidiphila DSM 44928] gi|256361519|gb|ACU75016.1| Endonuclease/exonuclease/phosphatase [Catenulispora acidiphila DSM 44928] Length = 252 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 38/271 (14%), Positives = 73/271 (26%), Gaps = 30/271 (11%) Query: 1 MSVVTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQETKTED--KNFPFETLQSL 53 M + V + N + R R+ LA + +++ D++CLQE T S Sbjct: 1 MPKIRVLSLNT--LYKDKPRVRLRALAEVLADSDYDVVCLQELSLPPSFGLIRSLTKTSF 58 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 Y + G + P+ + + + + + Sbjct: 59 PYAAHGTRLPTVAGGLLTLSRVPLVGHRYHVVAAPAKWRADVVMRRGVLVARFAVDGEFF 118 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 +T+T ++ + E + I Sbjct: 119 T----VTNTHLSPNHETDWSQAAPFTRVQQAELARMAQAIRRIDSGEPVIAVGDFNVPRD 174 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 + E Q+ L++ DA WD G +D I++SP Sbjct: 175 SWLFEGFQAASGLRDAFDGDAATTFRPVPG----WD----------GAALDQILVSPGVP 220 Query: 234 SLLHSARIDTKPRG---WTKPSDHTPVIVSL 261 + + G SDH V ++ Sbjct: 221 AKAEVVMQEKVRMGDGQDRYLSDHYGVAATI 251 >gi|224047139|ref|XP_002192582.1| PREDICTED: LOC90806 protein [Taeniopygia guttata] Length = 560 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 35/108 (32%), Gaps = 5/108 (4%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73 R N+ IKE + D++CLQE ++ ++ E L+SL YH E + Sbjct: 214 RFPNILQEIKELDADVLCLQEV--QEDHYRTEIKSSLESLGYHCEYKMRTGRKPDGCAIC 271 Query: 74 YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 ++ + + L + + N Sbjct: 272 FKTSKFSLISSNPVEFFRRDIPLLDRDNVGLVLLLQPRFHCKANAAIC 319 >gi|218780993|ref|YP_002432311.1| endonuclease/exonuclease/phosphatase [Desulfatibacillum alkenivorans AK-01] gi|218762377|gb|ACL04843.1| Endonuclease/exonuclease/phosphatase [Desulfatibacillum alkenivorans AK-01] Length = 250 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 34/252 (13%), Positives = 63/252 (25%), Gaps = 34/252 (13%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPF-----ETLQSLNYHIETCGQKSYNGVAIL 71 R + PDI+ +QE D E + N + Sbjct: 26 RKDAFMKLFRTYKPDILAVQE--ANDFQAEHLIQRMEDYDHAGFRKNAPDFWQSNILFFK 83 Query: 72 SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWI 131 + + D D ++++ ++ + +++ Sbjct: 84 KPWSLKKHRHIFYSDTPDEESKWKDSKWPRQGTLVQLEKGGKTLA--------------- 128 Query: 132 KRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191 + E A I + P + D + + Q Sbjct: 129 ---CVDTHYDFKPEVQARSARLLLNILEDFAPGLPTLVMGDFNAKPDSSCRKEFEQGGFK 185 Query: 192 TDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP 251 + THH ++ K+ G RID I+ + S +I G P Sbjct: 186 DPFDKRFGGTHHGFT---------GKDDGRRIDWILYRGGIEPVKASRKIIRGRFGGVYP 236 Query: 252 SDHTPVIVSLDI 263 SDH V Sbjct: 237 SDHFQVYCEFTW 248 >gi|290963099|ref|YP_003494281.1| hypothetical protein SCAB_88221 [Streptomyces scabiei 87.22] gi|260652625|emb|CBG75758.1| conserved hypothetical protein [Streptomyces scabiei 87.22] Length = 332 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 14/81 (17%), Positives = 26/81 (32%), Gaps = 17/81 (20%) Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP-- 251 I T Y+ + +G IDH++++ + + I + Sbjct: 259 PIEHTIPNEARYT-------LFHHGRGQMIDHMLVTRNLLAHYRGSEIHNEILHDDSIAF 311 Query: 252 --------SDHTPVIVSLDIP 264 SDH PV+ + D Sbjct: 312 ATDVKYPESDHAPVVATFDFD 332 Score = 38.2 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 11/53 (20%) Query: 1 MSVVTVATWNV-N----------SIRARIHNLAAWIKENNPDIICLQETKTED 42 M+ + +AT+N+ N S+ RI + I DI C QE ++ Sbjct: 1 MAQIRIATFNLENFDEPAPEDPPSLADRIALMKPQITRLRADIACFQEVHGQE 53 >gi|147771141|emb|CAN74183.1| hypothetical protein VITISV_034261 [Vitis vinifera] Length = 1201 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 25/240 (10%), Positives = 69/240 (28%), Gaps = 28/240 (11%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80 + + ++++ PD++CLQETK ++ + V Sbjct: 3 IKSMVRKHKPDLVCLQETKMKE---------------------MSDRVVKSVGIGRNLGW 41 Query: 81 THLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQ 140 L + + +G+ + + S + + + Sbjct: 42 VSLDARGXAGGVLVMWDKRVLEGLEFEVGSFSISCRFRNCEEGFVWVFSGLYGPSKGRER 101 Query: 141 RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHD 200 R EE G +N +N + + + ++ + ++ + + Sbjct: 102 RELWEELAAIKGLWNDPWCIAXDFNVVRFPAETSNGRQMSTAMREFSSFIDEFELVDPXL 161 Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 +++ + +D + S + + A + SDH P+++ Sbjct: 162 GGGAFTWIGGEGGALKAX----LDRFLFSGDWEERVTGAM---QCLLTRPVSDHCPILLD 214 >gi|167772884|ref|ZP_02444937.1| hypothetical protein ANACOL_04272 [Anaerotruncus colihominis DSM 17241] gi|167664817|gb|EDS08947.1| hypothetical protein ANACOL_04272 [Anaerotruncus colihominis DSM 17241] Length = 300 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 36/274 (13%), Positives = 80/274 (29%), Gaps = 21/274 (7%) Query: 2 SVVTVATWNV---NSI---RA-----RIHNLAAWIKENNPDIICLQETKTEDKNFPFETL 50 +++ V ++N+ I R+ R A +I+E+ I+ +QE + L Sbjct: 30 NLIRVVSFNLKRDFGIALNRSHKWGQRRALAAQFIRESGATIVGVQEL-LPNMRDDVSRL 88 Query: 51 QSLNYHI--ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL-R 107 ++Y + + S + ++ E R Sbjct: 89 LDVDYSVLGFGRFSGAKPNSDEHSDIIIKNDNASVRLIKTFWLSKSPERLSRAYFAVFPR 148 Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167 I + + + + + ++ L + L + +N Sbjct: 149 ICTVAEVYLTKLDRCV--RVFNTHLDHICGIARTLGIRVILDYMRSFNEERPMPTILMGD 206 Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227 + + ++ + H + ++ + ID+I Sbjct: 207 FNAKPTSRPVRLLRACSDEYPQLHLTDVYTRFPAHINNTLHNFSGRVRPGAQP--IDYIF 264 Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +S E + A I T P PSDH P+ +L Sbjct: 265 VSDEFE--IVEAHIMTDPVDGHYPSDHYPLEATL 296 >gi|323488215|ref|ZP_08093465.1| Endonuclease/exonuclease/phosphatase [Planococcus donghaensis MPA1U2] gi|323398073|gb|EGA90869.1| Endonuclease/exonuclease/phosphatase [Planococcus donghaensis MPA1U2] Length = 279 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 41/294 (13%), Positives = 82/294 (27%), Gaps = 39/294 (13%) Query: 3 VVTVATWNV-NSIRARIHNLAAW------IKENNPDIICLQETKTEDKNFP--FETLQSL 53 +V V ++N+ + + + + I+++ II LQE D++F + + Sbjct: 10 IVKVMSFNIAHGLG--MDGVVDLEKTAQVIEDSCATIIALQEV---DRHFSVRSSFVDQV 64 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 + E G + G + E G+ + + + TQ Sbjct: 65 GWLSERLGMYAAYGANMDVTPLDSERPNQQYGNVILSKYPIKYNENHLLTQVYCPFGNNE 124 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 G T + D + P Sbjct: 125 QRGILETVIEVDGSYVSVFNTHLALKDEELEVSVDEILAITGKSHFPRII---------T 175 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG------IRIDHIM 227 + + Y++ Y + K G RID+I Sbjct: 176 GDFNAPASNVHIQKLKRHFRDAFLKMKRGDAYTYPSPYVN---KETGEVFRPATRIDYIF 232 Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 P ++ +A I+T SDH P+ V + + + + Q T + + Sbjct: 233 ADPYL-DVVQAAVIETAV------SDHLPIAVDMVLSDAKVNDQVYTRKARVTV 279 >gi|281354345|gb|EFB29929.1| hypothetical protein PANDA_014987 [Ailuropoda melanoleuca] Length = 286 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 27/186 (14%), Positives = 52/186 (27%), Gaps = 18/186 (9%) Query: 96 EATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYN 155 + + I + ++ + + +++ + GD N Sbjct: 10 AIERDTEGHYIILKGSIQQVDMTIINIYAPNRGAARYTSQLLTKIKRHIDKNTVIVGDLN 69 Query: 156 IIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW 215 D E + L + D R H YSF+ ++ Sbjct: 70 TPLSEIDRTPWQKLSK------ESKALNAILDELDLIDIYRTLHPRTKEYSFYSNAHGTF 123 Query: 216 SKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTS 275 S RIDH + S I SDH + + L+ K ++S + Sbjct: 124 S-----RIDHALGHKTGLSQYQKIEIIPCI-----FSDHNALKLELN--HKEKPGRNSNT 171 Query: 276 QNMKPI 281 ++ I Sbjct: 172 WRLRTI 177 >gi|329922986|ref|ZP_08278502.1| endonuclease/exonuclease/phosphatase family protein [Paenibacillus sp. HGF5] gi|328941759|gb|EGG38044.1| endonuclease/exonuclease/phosphatase family protein [Paenibacillus sp. HGF5] Length = 494 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 37/287 (12%), Positives = 78/287 (27%), Gaps = 30/287 (10%) Query: 4 VTVATWNVNSIRARIHNLAAW----------IKENNPDIICLQETKTEDKNFPFETLQSL 53 + V ++N +R ++ W I E+ PD+I QE + Sbjct: 38 LKVMSFN---LRYAANDGQPWENRRPVTRNLILEHQPDVIGTQE--GLHRQIVDLENDLP 92 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 Y G++ + ++ + E + L + + + ++ Sbjct: 93 GYDRIGVGREGGSLGEYMAIFYNTERLKPLEQSHFWLSDTPQTISSASWGNQIPRMATWV 152 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + + + L S+ + + + Sbjct: 153 RFQDLRNGKTF----YMVNTHLDHQSEVSRQKSAALIVDKMKSFDPEIPVVITGDFNTLP 208 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 + L + T R D +++ D G RID I+ Sbjct: 209 ASDTYSIFTNNGLSDAHVTAKKRTNDDLGTFHNYKDPTGGG----SGNRIDWILHGQGW- 263 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 + + I PSDH PV++ +Q + T+ P Sbjct: 264 -NVLHSEIINYKEDDQYPSDHYPVMME-----GTLQQSNKTTGETVP 304 >gi|321445374|gb|EFX60676.1| hypothetical protein DAPPUDRAFT_123357 [Daphnia pulex] Length = 359 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 34/275 (12%), Positives = 77/275 (28%), Gaps = 33/275 (12%) Query: 3 VVTVATWNVNSIR--ARIHNLA----AWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56 + + T+N+ +R ++ + I+ N +I QET + + + Sbjct: 26 TIQIRTYNIRGLRCNLKLKRVLNTCHKIIQNNPFAVIGFQETHLTKDDVQSLKFKWRHGF 85 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 + G GV +L + + + D + T + Sbjct: 86 VLAPGTNRQCGVLLLYGDAWTHLTSEVDTDGQRASVVLAKGANTFIFNCIYAP------- 138 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 +D + P + + + + + Sbjct: 139 --------NDHSIDFFANIYDKLAEQIANYPEAVLNIFGDFNVALEGIDGVNRQKTTSEA 190 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 + + + + D RA + + +++ G R+D I + + Sbjct: 191 NASKLIIENNKILNLIDTFRAINPSGG-FTW--VRDKC-----GSRLDMIFSAKCDFVKI 242 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271 + ID SDH V+ L+I E K+ Sbjct: 243 KQSSID----WTFDDSDHAMVLTELEILECTKRGP 273 >gi|297835128|ref|XP_002885446.1| endonuclease/exonuclease/phosphatase family protein [Arabidopsis lyrata subsp. lyrata] gi|297331286|gb|EFH61705.1| endonuclease/exonuclease/phosphatase family protein [Arabidopsis lyrata subsp. lyrata] Length = 460 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 45/270 (16%), Positives = 82/270 (30%), Gaps = 25/270 (9%) Query: 12 NSIRARIHNLAAWIKENNPDIICLQETKTEDKNF--PFETLQ-SLNY-HIETCGQKSYNG 67 N +R ++A ++E + DI+ LQ+ K E++ P L +L ++ G Sbjct: 173 NGYSSR-RSIAELLRELDADILALQDVKAEEETLMKPLSDLASALGMKYVFAESWAPEYG 231 Query: 68 VAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDK 127 AILSK+ + D D + + + L H + K D Sbjct: 232 NAILSKWPIKKWRVQRIADVDDFRNVLKVTVEVPWAGDVNVYCTQLDHLDENWRMKQIDA 291 Query: 128 ISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQ 187 I+ L + ++ +EV + + Sbjct: 292 ITRGDESPHILLGGLNSLDGSDYSI---ARWNHILKVKYYEDSGKPTPRVEVMRFLKGKG 348 Query: 188 NMGFTDAIRATHDTHHLYSFWDYYADSWSKN------KGIRIDHIMLSPEATSLLHSARI 241 + + + + +N G R+D+I+ SPE+ Sbjct: 349 YLDSKEFAGECEPVVII---------AKGQNVQGTCKYGTRVDYILASPESPYEFVPGS- 398 Query: 242 DTKPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271 SDH V V L I + R + Sbjct: 399 -YSVVSSKGTSDHHIVKVDLVITKERSRGS 427 >gi|326789876|ref|YP_004307697.1| endonuclease/exonuclease/phosphatase [Clostridium lentocellum DSM 5427] gi|326540640|gb|ADZ82499.1| Endonuclease/exonuclease/phosphatase [Clostridium lentocellum DSM 5427] Length = 263 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 49/271 (18%), Positives = 90/271 (33%), Gaps = 19/271 (7%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET--KTEDKNFPFETLQSLNYH 56 + + T N +S + +I+ LA IKEN+ D+I LQE K F L++ NY Sbjct: 1 MKLLTLNCHSWQEDHQLDKINYLAKTIKENDYDVIALQEVSQHMLGKQF-KGQLKTDNYV 59 Query: 57 I---ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 + E + N ++ + I + G L + IE +QT N Sbjct: 60 VVLQEALQKLGVNHYEVVWDFAHIGFQVYEEGLCLLSKHPIIEEESFFVSQTKDTLNWKS 119 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 T ++I L + E + + + + P+ N Sbjct: 120 RRIVKATINYKGEEIDCYSCHLGWWEDEEEPAKLQLNKLNAKLHPKRRAFLLGDFNNNAN 179 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK-GIRIDHIMLSPEA 232 + A + W +N G+R+D+I + + Sbjct: 180 VRDKGYDYMLGLGWKDTYMLAKDKDNGVTVQ-----GKIHGWEENAGGLRLDYIFTNQKV 234 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + S+++ SDH V V +++ Sbjct: 235 E--VRSSKVIFNGSNKAVISDHHGVQVEIEL 263 >gi|169832807|ref|YP_001695419.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pneumoniae Hungary19A-6] gi|168995309|gb|ACA35921.1| endonuclease/exonuclease/phosphatase family [Streptococcus pneumoniae Hungary19A-6] Length = 284 Score = 50.6 bits (119), Expect = 2e-04, Method: Composition-based stats. Identities = 41/285 (14%), Positives = 88/285 (30%), Gaps = 23/285 (8%) Query: 1 MSVVTVATWNVN-------SIRARIHNLAAWIKENNPDIICLQE-TKTEDKNFPFETLQS 52 M +TV+TWN+N + + + + N DI+CL E K ++ + E L+S Sbjct: 1 MKKMTVSTWNINQRSGTGKG-KQIPEMIVHELAKQNSDIVCLTEYVKGKNHSEFCEQLKS 59 Query: 53 LNY--HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 L Y + K + +++ + + + F+ L I Sbjct: 60 LGYSLFMYPEHIKKFQNEVLIAIKTKFVTLPRITTFPEEEFPDFLHLQIDFEGAPLHIIG 119 Query: 111 LYLPHGNPITSTKY---------DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161 + + + Y D K ++ R L+ N H Sbjct: 120 ARIKIADIDDTLPYKRKLPLLVKDAKERLLQIEYITEYVRKLNGNILLMGDFNNFHYFEH 179 Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI 221 + + + T + +YS+ + + + + I Sbjct: 180 QKIDSWEHDKEFLQNYYSYPLLVAKMTEVNLATYSPTGNYDEVYSWINPGTRADNIKRYI 239 Query: 222 RIDHIMLSPEATSLLHSAR---IDTKPRGWTKPSDHTPVIVSLDI 263 R DH+ + S + + + K + DH + ++ + Sbjct: 240 RNDHLFSNLTEISDIKYSWEFTKNPKYQNKVGFPDHAILSATISL 284 >gi|315445296|ref|YP_004078175.1| metal-dependent hydrolase [Mycobacterium sp. Spyr1] gi|315263599|gb|ADU00341.1| metal-dependent hydrolase [Mycobacterium sp. Spyr1] Length = 263 Score = 50.6 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 30/272 (11%), Positives = 71/272 (26%), Gaps = 33/272 (12%) Query: 4 VTVATWNVNSIRAR-------IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56 + + T+N+ + R + + + DI+ LQE + L +L Sbjct: 1 MKLVTFNI--LHGRTPGAEVDLDRFVDCVAGLDADILALQEVDSIQARSGLADLTALAAE 58 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL-RIGNLYLPH 115 + + T + + + + + R+ + P Sbjct: 59 AMGARSHRFVAAIAGTPGATWMAATGEEQPGTAAYGVALLSRYPAVSWQVARLPRIPFPF 118 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + + + R L E + + +P + + + Sbjct: 119 PLYLREPRKVVVVHEEPRAAVIGRFDTPLGELTVANTHLSFVPGWNRYQLHHLMRDVRGL 178 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR-IDHIMLSPEATS 234 + H + + ++ R +DH++ A Sbjct: 179 PSPWIVTGDLNMPAKPARRWSRLHCLASAPT--------FPADRPTRQLDHVLTDEPAF- 229 Query: 235 LLHSARIDTKPRGWTKP----SDHTPVIVSLD 262 R + P SDH P++V L+ Sbjct: 230 ---------TIRSYDTPEMAISDHRPLVVDLE 252 >gi|319939609|ref|ZP_08013968.1| LPXTG cell wall surface protein [Streptococcus anginosus 1_2_62CV] gi|319811198|gb|EFW07504.1| LPXTG cell wall surface protein [Streptococcus anginosus 1_2_62CV] Length = 736 Score = 50.6 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 32/90 (35%), Gaps = 10/90 (11%) Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT---K 250 + HD YS++ Y + S +D+I +S + + + Sbjct: 604 NMMLNHDAADRYSYF-YRGSNQS------LDNIFVSKNIADKTVFSPVHINASFMEEHGR 656 Query: 251 PSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 SDH PVI LD + + + KP Sbjct: 657 ASDHDPVIAQLDFSQKKDDTTPTQPTEPKP 686 >gi|74007512|ref|XP_848633.1| PREDICTED: similar to LINE-1 reverse transcriptase homolog [Canis familiaris] Length = 682 Score = 50.6 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 22/93 (23%), Positives = 35/93 (37%), Gaps = 12/93 (12%) Query: 189 MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGW 248 M FTD R H Y+F+ ++ RIDHI+ + I Sbjct: 1 MDFTDIYRTLHPNSTEYTFFSSAHGTFP-----RIDHILGHKSGLNRNQKIGIVPCI--- 52 Query: 249 TKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 SDH + + L+ +K + S + +K I Sbjct: 53 --FSDHNALKLELN--HNKKFGRTSNTWRLKTI 81 >gi|281354022|gb|EFB29606.1| hypothetical protein PANDA_013694 [Ailuropoda melanoleuca] Length = 324 Score = 50.6 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 27/186 (14%), Positives = 52/186 (27%), Gaps = 18/186 (9%) Query: 96 EATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYN 155 + + I + ++ + + +++ + GD N Sbjct: 48 AIERDTEGHYIILKGSIQQVDMTIINIYAPNRGAARYTSQLLTKIKRHIDKNTVIVGDLN 107 Query: 156 IIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW 215 D E + L + D R H YSF+ ++ Sbjct: 108 TPLSEIDRTPWQKLSK------ESKALNAILDELDLIDIYRTLHPRTKEYSFYSNAHGTF 161 Query: 216 SKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTS 275 S RIDH + S I SDH + + L+ K ++S + Sbjct: 162 S-----RIDHALGHKTGLSQYQKIEIIPCI-----FSDHNALKLELN--HKEKPGRNSNT 209 Query: 276 QNMKPI 281 ++ I Sbjct: 210 WRLRTI 215 >gi|74821373|sp|Q95SX7|RTBS_DROME RecName: Full=Probable RNA-directed DNA polymerase from transposon BS; AltName: Full=Reverse transcriptase gi|16648424|gb|AAL25477.1| LD46618p [Drosophila melanogaster] Length = 906 Score = 50.6 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 38/273 (13%), Positives = 70/273 (25%), Gaps = 40/273 (14%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 M+ + + WN N I + ++ + DI+ + E + + ET++ Y Sbjct: 1 MNPLKILIWNANGISRKAKDVELFAHNKKVDILLVTELRLKRG----ETVKIYGYAYYPA 56 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + S N ++ + F + L + G+ Sbjct: 57 YRPSLNNNSVG----------GVAVFVRTTLRHFPQRVIETRHIQLSSVKVATGLGDLQF 106 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 S Y S F + + GD+N + L V Sbjct: 107 SAIY-CSPSTRIEERHFTDIIRACGQRYLVGGDWNARHWLWGDTCNSPRGRELAEALSVT 165 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + +H ID + L A Sbjct: 166 GAKILATGSPTRYPYVPSHTPSC-------------------ID-FAVYHGIPDHL--AT 203 Query: 241 IDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDS 273 I + W SDH P+I+S++ Sbjct: 204 I---TQSWDLDSDHLPLIISIETDSTHVNPSPR 233 >gi|11323019|emb|CAC16871.1| pol [Drosophila melanogaster] Length = 1227 Score = 50.6 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 38/274 (13%), Positives = 68/274 (24%), Gaps = 51/274 (18%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETK--TEDKNF--PFETLQSLNYHIE 58 +T+ WN++ I + L IK++ PDI+ LQETK NF P E Y Sbjct: 2 TITILQWNIHGIFNNYNELTLLIKDHAPDIVFLQETKLPCNSTNFICPKE---YSGYFHN 58 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 S + + + + A + IN I + + Sbjct: 59 FSYNTSAKQGIGVLIKRNVPHTYRNINSSILCSALQLNFEQVINIVNAYIPPSQIFSSSD 118 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 I+ + S P I + ++ + Sbjct: 119 ISEILQN-LNGSTILLGDLNSWSPLWGSPRTNTRGKKIETVILENSLIVLNDGSPTHLST 177 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 ID ++SP+ + Sbjct: 178 HNTFTH--------------------------------------IDISLISPQIAHMCSW 199 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQD 272 + SDH P+ + ++ P Sbjct: 200 S-----ISDNLHGSDHFPITIHINTPTRPDNTLP 228 >gi|124087428|ref|XP_001346851.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|145474943|ref|XP_001423494.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|50057240|emb|CAH03224.1| Conserved hypothetical protein with homology to transcriptional regulator [Paramecium tetraurelia] gi|124390554|emb|CAK56096.1| unnamed protein product [Paramecium tetraurelia] Length = 326 Score = 50.6 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 42/267 (15%), Positives = 83/267 (31%), Gaps = 28/267 (10%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAI------ 70 R + +K N DI CLQE ++ +F E ++ LNY I + + Sbjct: 64 RSTKIIEQLKIFNVDIFCLQEV--DNIDFYQERIKKLNYEICFVQRPQRPDGCLIAFKVD 121 Query: 71 ---------LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 S + + + + + L IGN++ Sbjct: 122 KFKLLKSSEYSLDKMAINYGLPLQYQRQNVFQIVILEHILTKKQLVIGNIHTFWNPNQDD 181 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 KY + +++ ++ LIF GD N +P + + + Sbjct: 182 LKYFQIVQLVQKMEAEKE---SDDQILIFCGDLNSLPHSNPIQYIQKNKPIVERIEKSSN 238 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL----H 237 + + + + Y + + + + KG ID+I + Sbjct: 239 QIKLQKEIFEHYGPPKLNWQS-AYHPFPKFTNYTTDFKGC-IDYIFYHNANVEKILRLPE 296 Query: 238 SARIDTKP--RGWTKPSDHTPVIVSLD 262 + + + PSDH P++ S D Sbjct: 297 ESVLQQEVALPNRNFPSDHLPILASFD 323 >gi|262395406|ref|YP_003287259.1| metal-dependent hydrolase [Vibrio sp. Ex25] gi|262339000|gb|ACY52794.1| metal-dependent hydrolase [Vibrio sp. Ex25] Length = 288 Score = 50.6 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 43/288 (14%), Positives = 83/288 (28%), Gaps = 46/288 (15%) Query: 2 SVVTVATWNV-----NSIRARIH-----NLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51 + + + +WN+ N + L ++ + DII QE D + Sbjct: 20 NSINLTSWNIEWLSINGGKVSRTSDDFIKLNQYVDKTQADIIAFQEV---DSKAAVQKAV 76 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 Y I + N ++ T + + + T + LR + Sbjct: 77 GDGYAIYLSDRAQSNN--KHLQFSDTNQYTGFAVRKDIEVSDPADFSITRSNSKLRFASY 134 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 + + N + + R + + + + Sbjct: 135 IVVNPNQKDELHLLSVHLKAGCSGAYKNNRN--------CQTLSQQGEALAKWMSEREKK 186 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIR-------- 222 + + + + AI + L + D AD + NK R Sbjct: 187 KQQYAVMGDFNHNLSYQRDWLWAIMTLGNDAQLVTR-DTKADCKVRSNKNPRKTHQFRSL 245 Query: 223 IDHIMLSPEATSL------LHSARIDTKPRGWTKPSDHTPV--IVSLD 262 IDHI++SP+ + S + K SDH PV V+L+ Sbjct: 246 IDHIIVSPQIKAKNAHQTLFSSQDVLDY-----KLSDHCPVNATVTLN 288 >gi|222111827|ref|YP_002554091.1| endonuclease/exonuclease/phosphatase [Acidovorax ebreus TPSY] gi|221731271|gb|ACM34091.1| Endonuclease/exonuclease/phosphatase [Acidovorax ebreus TPSY] Length = 291 Score = 50.6 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 40/300 (13%), Positives = 73/300 (24%), Gaps = 52/300 (17%) Query: 4 VTVATWN---VNSIRARIH--NLAAWIKEN-NPDIICLQETKT-----------EDKNFP 46 + + TWN + R+ + + + D++CLQE + Sbjct: 1 MQLVTWNTQWCRGLDGRVDPARIVQYAVALGDVDVLCLQEIAVNYPGLAGSPGDQVAQVQ 60 Query: 47 FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 + + A + I T LP L + + Sbjct: 61 SAL--PAGWQVFFGAAVDE-WTAAGRQRFGNLIATRLPVLQLQHHPLPYPPDAGVRSMPR 117 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 L + + + + R A L PQ +P Sbjct: 118 LCSVLTVQDPALGPVRVMTTHLEYYSKPQRMAQALALRALHLQACAQAAQRPQGLADGSP 177 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI--- 223 + + + + A D + W R+ Sbjct: 178 FQPKAHTPHAVLCGDFNLQAHEPEYAMLAAALADEEGATAGQAGQPPLWDA---WRLLHP 234 Query: 224 ----------------------DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 D I +S S + + R+D G T+ SDH PV++ L Sbjct: 235 GAPQPPTFCVFDQTYAPQPLACDFIWVSDSLRSRVRAVRVD----GVTQASDHQPVLLEL 290 >gi|323305214|gb|EGA58961.1| Isc1p [Saccharomyces cerevisiae FostersB] Length = 471 Score = 50.6 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 37/268 (13%), Positives = 77/268 (28%), Gaps = 19/268 (7%) Query: 26 KENNPDIICLQETKTEDK--NFPFETLQSLNYH-IETCGQKSYNGVAILSKYQPIEIVTH 82 + + D+I LQE + Y + G + G+AILSK + Sbjct: 83 ENEDYDVIALQEIWCVEDWKYLASACASKYPYQRLFHSGILTGPGLAILSKVPIESTFLY 142 Query: 83 LPGDDLDVQARFIEATFTINTQTLRI------------GNLYLPHGNPITSTKYDDKISW 130 + A F + + + + +++ P+ + + Sbjct: 143 RFPINGRPSAVFRGDWYVGKSIAITVLNTGTRPIAIMNSHMHAPYAKQGDAAYLCHRSCQ 202 Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG 190 F R + +I GD N P ++ Sbjct: 203 AWDFSRLIKLYRQAGYAVIVVGDLNSRPGSLPHKFLTQEAGLVDSWEQLHGKQDLAVIAR 262 Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR---G 247 + + S + + ++ R+D+ ++ P+ + A + R Sbjct: 263 LSPLQQLLKGCTTCDSLLNTWRAQRQPDEACRLDYALIDPDFLQTV-DAGVRFTERIPHL 321 Query: 248 WTKPSDHTPVIVSLDIPEPRKKQQDSTS 275 SDH +L+I + + STS Sbjct: 322 DCSVSDHFAYSCTLNIVPQGTESRPSTS 349 >gi|114608807|ref|XP_001151885.1| PREDICTED: sphingomyelin phosphodiesterase 2, neutral membrane (neutral sphingomyelinase) isoform 2 [Pan troglodytes] gi|114608809|ref|XP_001152001.1| PREDICTED: sphingomyelin phosphodiesterase 2, neutral membrane (neutral sphingomyelinase) isoform 3 [Pan troglodytes] Length = 423 Score = 50.6 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 42/297 (14%), Positives = 89/297 (29%), Gaps = 37/297 (12%) Query: 4 VTVATWNVNSI------RA-RIHNLAAWIKENNPDIICLQETKT-EDKNFPFETLQS-LN 54 + + N I RA R+ L ++ + + D+ L+E + +D + + L Sbjct: 9 LRIFNLNCWGIPYLSKHRANRMRRLGDFLNQESFDLALLEEVWSEQDFQYLRQKLSPTYP 68 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN---- 110 +G+ + SK+ E+ H+ + F+ L + + Sbjct: 69 AAHHFRSGIIGSGLCVFSKHPIQELTQHIYTLNGYPYMIHHGDWFSGKAVGLLVLHLSGM 128 Query: 111 -------LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 N +++ +F + + ++ GD N+ P+ C Sbjct: 129 VLNAYVTHLHAEYNRRKDIYLAHRVAQAWELAQFIHHTSKKADVVLLCGDLNMHPEDLGC 188 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223 W LE R + G+RI Sbjct: 189 CLLKEWTGLHDAYLETRDFKGSEEGNTMVPKNCYVSQQEL-----------KPFPFGVRI 237 Query: 224 DHIMLSPEATSLLHSARIDT-----KPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTS 275 D+++ + S + P T SDH ++ +L + +Q S++ Sbjct: 238 DYVLY-KAVSGFYISCKSLETTTGFDPHSGTPLSDHEALMATLFVRHSPPQQNPSST 293 >gi|151944728|gb|EDN62987.1| Inositol phosphosphingolipid phospholipase C [Saccharomyces cerevisiae YJM789] Length = 471 Score = 50.6 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 37/268 (13%), Positives = 77/268 (28%), Gaps = 19/268 (7%) Query: 26 KENNPDIICLQETKTEDK--NFPFETLQSLNYH-IETCGQKSYNGVAILSKYQPIEIVTH 82 + + D+I LQE + Y + G + G+AILSK + Sbjct: 83 ENEDYDVIALQEIWCVEDWKYLASACASKYPYQRLFHSGILTGPGLAILSKVPIESTFLY 142 Query: 83 LPGDDLDVQARFIEATFTINTQTLRI------------GNLYLPHGNPITSTKYDDKISW 130 + A F + + + + +++ P+ + + Sbjct: 143 RFPINGRPSAVFRGDWYVGKSIAITVLNTGTRPIAIMNSHMHAPYAKQGDAAYLCHRSCQ 202 Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG 190 F R + +I GD N P ++ Sbjct: 203 AWDFSRLIKLYRQAGYAVIVVGDLNSRPGSLPHKFLTQEAGLVDSWEQLHGKQDLAVIAR 262 Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR---G 247 + + S + + ++ R+D+ ++ P+ + A + R Sbjct: 263 LSPLQQLLKGCTTCDSLLNTWRAQRQPDEACRLDYALIDPDFLQTV-DAGVRFTERIPHL 321 Query: 248 WTKPSDHTPVIVSLDIPEPRKKQQDSTS 275 SDH +L+I + + STS Sbjct: 322 DCSVSDHFAYSCTLNIVPQGTESRPSTS 349 >gi|190405580|gb|EDV08847.1| inositol phosphosphingolipids phospholipase C [Saccharomyces cerevisiae RM11-1a] gi|256273772|gb|EEU08697.1| Isc1p [Saccharomyces cerevisiae JAY291] gi|259145925|emb|CAY79185.1| Isc1p [Saccharomyces cerevisiae EC1118] gi|323333910|gb|EGA75299.1| Isc1p [Saccharomyces cerevisiae AWRI796] gi|323337923|gb|EGA79162.1| Isc1p [Saccharomyces cerevisiae Vin13] gi|323348959|gb|EGA83195.1| Isc1p [Saccharomyces cerevisiae Lalvin QA23] Length = 477 Score = 50.6 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 37/268 (13%), Positives = 77/268 (28%), Gaps = 19/268 (7%) Query: 26 KENNPDIICLQETKTEDK--NFPFETLQSLNYH-IETCGQKSYNGVAILSKYQPIEIVTH 82 + + D+I LQE + Y + G + G+AILSK + Sbjct: 89 ENEDYDVIALQEIWCVEDWKYLASACASKYPYQRLFHSGILTGPGLAILSKVPIESTFLY 148 Query: 83 LPGDDLDVQARFIEATFTINTQTLRI------------GNLYLPHGNPITSTKYDDKISW 130 + A F + + + + +++ P+ + + Sbjct: 149 RFPINGRPSAVFRGDWYVGKSIAITVLNTGTRPIAIMNSHMHAPYAKQGDAAYLCHRSCQ 208 Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG 190 F R + +I GD N P ++ Sbjct: 209 AWDFSRLIKLYRQAGYAVIVVGDLNSRPGSLPHKFLTQEAGLVDSWEQLHGKQDLAVIAR 268 Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR---G 247 + + S + + ++ R+D+ ++ P+ + A + R Sbjct: 269 LSPLQQLLKGCTTCDSLLNTWRAQRQPDEACRLDYALIDPDFLQTV-DAGVRFTERIPHL 327 Query: 248 WTKPSDHTPVIVSLDIPEPRKKQQDSTS 275 SDH +L+I + + STS Sbjct: 328 DCSVSDHFAYSCTLNIVPQGTESRPSTS 355 >gi|327193878|gb|EGE60754.1| putative endonuclease/exonuclease/phosphatase family protein [Rhizobium etli CNPAF512] Length = 369 Score = 50.6 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 45/112 (40%), Gaps = 24/112 (21%) Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT- 233 E + + GF + + A ++ Y+A + ++D+I LSP Sbjct: 260 HQPEAESALDVFSHDGFVENVMARRQPLDRWTL--YHARGPQEQHLCQLDYIWLSPALAT 317 Query: 234 -------SLLHSA-----------RIDTKPR-GWTKP--SDHTPVIVSLDIP 264 ++ + ++ PR GW +P SDH PV+++LD+P Sbjct: 318 HNSGRLPEIIRNGQPYRTVFPPGQEVERYPRTGWDRPKASDHCPVVMTLDLP 369 >gi|190346925|gb|EDK39113.2| hypothetical protein PGUG_03211 [Meyerozyma guilliermondii ATCC 6260] Length = 290 Score = 50.6 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 36/265 (13%), Positives = 60/265 (22%), Gaps = 45/265 (16%) Query: 17 RIHNLAAWIK---ENNPDIICLQE-TKTEDKNF-----PFETLQSLN--------YHIET 59 R + IK +P I+ LQE + + + P + Y Sbjct: 53 RKAGVIDSIKNYTSQHPTIVGLQEALRGQLDDIMKGLGPEWKFFGVGGSGDTKGEYCPII 112 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 + V +K+ G + A + I Sbjct: 113 YKSNEWELVNGTTKWLSETPDKPSRGYGSKYERIVTFAELRHVSSGRTIHYFNTHLDPHD 172 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 +Y+ R + P+ GD+N A + Sbjct: 173 DHVRYE-----SVRDIITYVNHTRQGSPVFLGGDFNAKRTSAPYKYVATQMTPASIAPDP 227 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML-SPEATSLLHS 238 + + H ID I + + S Sbjct: 228 --KGVDNKEKSTNSGFQFNHPKT--------------------IDFIFFQDHGSKVKVDS 265 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263 I + G SDH+PVI I Sbjct: 266 YEILSSTSGNVVISDHSPVIADFSI 290 >gi|88803294|ref|ZP_01118820.1| hypothetical protein PI23P_11917 [Polaribacter irgensii 23-P] gi|88780860|gb|EAR12039.1| hypothetical protein PI23P_11917 [Polaribacter irgensii 23-P] Length = 336 Score = 50.6 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 48/275 (17%), Positives = 83/275 (30%), Gaps = 48/275 (17%) Query: 2 SVVTVATWNV-------------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFE 48 S + V ++NV N N +I + DI+ LQE Sbjct: 97 SDLKVMSFNVKTFDFFNNKKKVEN-----TKNGFEFIADQALDILVLQEY----YQLKKN 147 Query: 49 TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108 L +I+ ++S G+AI SKY+ I+ D I A T+RI Sbjct: 148 KLPYPYRYIKLRSKRSKYGMAIYSKYK---IINSGSLDLKSTGNNIIFADILKEKDTIRI 204 Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168 N + ++ ++ + R+ + + I Sbjct: 205 YNAHFES-----LKIKPNEENFGEENSEKLIGRVAQAFKRQASQTALFLNHEKQWKGKKI 259 Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 D T + +N I A Y++W + +RID I+ Sbjct: 260 ICGDFNNTAYSWMYHEISKN-KKDAFIVAGEGFGKSYNYW------FP----LRIDFILT 308 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 A I+ SDH P+ +++ Sbjct: 309 DEA-------AIINQFKTFTEIYSDHFPIRANINW 336 >gi|84625383|ref|YP_452755.1| hypothetical protein XOO_3726 [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|84369323|dbj|BAE70481.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 319 Score = 50.6 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 33/271 (12%), Positives = 65/271 (23%), Gaps = 26/271 (9%) Query: 4 VTVATWNV------NS---IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 + V ++NV + R ++ A IK+ +PD+ QE E + L + Sbjct: 66 LRVMSFNVRVPMDSDGDKRWTVRRTSMVALIKQAHPDVFGTQELVQEQAQYLASHLPAYR 125 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 + + + + V L ++ + Sbjct: 126 WFGKGRRADGSDEHMGVFYDSNALSVIESGDFWLSETPEIPGSSSWNTDLPRMVTWALFE 185 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 N R + + +P + +D Sbjct: 186 RRNDKRRFYL----LNTHLPHRDQDEAAREHVARVILSRIATLPADIPVVVTGDFNSDPD 241 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 + + T ++ RID I+ T Sbjct: 242 QGTYRTLTAVLGDARAHVAKPQGPEKTFQNFTTQPTR----------RIDWILF-RGLTP 290 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 G PSDH PV+ + + P+ Sbjct: 291 --TRFSTLDARSGGILPSDHYPVLAAFEWPQ 319 >gi|71418503|ref|XP_810873.1| RNA-editing complex protein MP100 [Trypanosoma cruzi strain CL Brener] gi|70875471|gb|EAN89022.1| RNA-editing complex protein MP100, putative [Trypanosoma cruzi] Length = 922 Score = 50.6 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 33/292 (11%), Positives = 69/292 (23%), Gaps = 47/292 (16%) Query: 2 SVVTVATWNV-------------------NSIRARIHNLAAWIKENNPDIICLQETKTED 42 + + + TWNV S + R LA I++ + D++ +QE Sbjct: 646 TTLKLLTWNVMFDRYSGKPTPLGMPGIDWCSPK-RYPVLARVIQQEDADVVGMQEV---- 700 Query: 43 KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIE-IVTHLPGDDLDVQARFIEATFTI 101 + +E L + E +S + + + T + Sbjct: 701 EPVFWEFLSKQPWMRENYYFSCGYTSPSISPWGVLMLVHRRRFPVQSITYLNVPAWTNHV 760 Query: 102 NTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161 + + L + + + L GD + + Sbjct: 761 SLMPVVCLQLPHGPVHVAAAHLLAPYTKSHETARTSQDSALRHHMLKTLTGDVVTMGDFN 820 Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI 221 D ++ D F+ Sbjct: 821 DWPTNEFLMPAESQYVDCWPLIYPHDAGKTMDETNTFCKLKVEEMFFG------------ 868 Query: 222 RID-HIMLSPEATS---------LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 R D + S ++ + G+ PSDH V ++ + Sbjct: 869 RSDKLFLRSRRLAPVEGHLVGTKSVNDENGNKDAPGYLFPSDHYGVSMTFAL 920 >gi|115753090|ref|XP_001204165.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] gi|115927127|ref|XP_788090.2| PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus] Length = 124 Score = 50.6 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 23/56 (41%), Gaps = 2/56 (3%) Query: 188 NMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEA-TSLLHSARI 241 + F D+ R H + ++ W + N G RID+I+++ L I Sbjct: 67 DNLFVDSFRYFHPKRENAFTCWSTLTGARQTNYGTRIDYIIVNERLSVDELTECDI 122 >gi|227550110|ref|ZP_03980159.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecium TX1330] gi|227180754|gb|EEI61726.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecium TX1330] Length = 293 Score = 50.6 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 40/282 (14%), Positives = 74/282 (26%), Gaps = 31/282 (10%) Query: 4 VTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQET--KTEDKNFPFETLQSLNY- 55 + + T N +S + ++ +A I D+I LQE + K E L++ + Sbjct: 20 MKIMTLNTHSWLEEEPQEKLKQIAQKICHEQYDVIALQEVNQTMDAKRLTSEQLKNFSQV 79 Query: 56 ---------HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 + C + + + + + Sbjct: 80 QEQTPVRSDNFAYCLIQLLAEQGETYYWSWEMSHIGYAIYEEGNALLSKQPLTSQTHLVS 139 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 H I + K I S ++ + F Sbjct: 140 ETKEKEDYHTRKILVGQTSVKTQCITVASCHFSWWVDEKSGFAFEWKELEASLAPLTTPL 199 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK-GIRIDH 225 + + + DA + + D W NK G+RID+ Sbjct: 200 YLLGDFNNPAEGSGYDLVAKSQLPIRDAYPIAQKKQAEAT-IEKRIDGWENNKEGLRIDY 258 Query: 226 IMLSPEATSLLHSARIDTKPR---GWTKP--SDHTPVIVSLD 262 I + + + R G P SDH V V+L+ Sbjct: 259 IYVP-------QDCFVTSYQRIFDGENGPIVSDHYGVAVTLE 293 >gi|190892451|ref|YP_001978993.1| putative endonuclease/exonuclease/phosphatase family protein [Rhizobium etli CIAT 652] gi|190697730|gb|ACE91815.1| putative endonuclease/exonuclease/phosphatase family protein [Rhizobium etli CIAT 652] Length = 369 Score = 50.6 bits (119), Expect = 3e-04, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 44/112 (39%), Gaps = 24/112 (21%) Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E + + GF + + A ++ Y+A + ++D+I LSP + Sbjct: 260 HQPEAESALDVFSHDGFVENVMARRQPLDRWTL--YHARGPQEQHLCQLDYIWLSPALAA 317 Query: 235 L--------LHSA-----------RIDTKPR-GWTKP--SDHTPVIVSLDIP 264 + ++ PR GW +P SDH PV+++LD+P Sbjct: 318 HNSGRLPEIIRKGQPYRTVFPPGQEVERYPRTGWDRPKASDHCPVVMTLDLP 369 >gi|47231636|gb|AAT12845.1| pol protein [Drosophila melanogaster] Length = 1092 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 41/266 (15%), Positives = 84/266 (31%), Gaps = 38/266 (14%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 ++ +A WN I +I L +I + II + ET+ ++ + E Y + Sbjct: 21 ILKIAFWNAGGINNKIDELKLFILNIDAHIIIVTETRLDNNSTKLELPGYFTYLAQNPAS 80 Query: 63 KSYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 GVA + + + + + ++ + I ++Y P + Sbjct: 81 SKRGGVATIVNSSLRHMALEPIEKECIQSAPIVLLPENNRRSEMIVIASVYCPPSLSWSP 140 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + L FA + + + LI GD+N + I + Q Sbjct: 141 HHF-------TDVLNFAEKTMGGQTKLILCGDWNAKH---RQWGCIRACQRGAALYDAIQ 190 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA---TSLLHS 238 + + + A HDT S ID + + S Sbjct: 191 ADSMAEIVATGSATHFPHDTRKSPSA---------------IDFSIC-KRLGRYEKRISS 234 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIP 264 + + SDH P+++ +++ Sbjct: 235 SAHLS--------SDHLPILLEINLD 252 >gi|330837418|ref|YP_004412059.1| Endonuclease/exonuclease/phosphatase [Spirochaeta coccoides DSM 17374] gi|329749321|gb|AEC02677.1| Endonuclease/exonuclease/phosphatase [Spirochaeta coccoides DSM 17374] Length = 372 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 40/328 (12%), Positives = 86/328 (26%), Gaps = 61/328 (18%) Query: 4 VTVATWNVNSI---RA---------------------RIHNLAAWIKEN---NPDIICLQ 36 VT+ +WNV ++ R R+ ++ + + DII LQ Sbjct: 34 VTILSWNVQNLMDGRTSGTEYEEYGPSSRWDETAYHLRLEDIRKVLSSRIFPDADIIVLQ 93 Query: 37 ETKTEDKNFPFETLQS----LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQA 92 E E+ + + Y + + + + + G + Sbjct: 94 EV--ENSGVVADLIAGPLARRGYRWYAAAGQEGGAICTAIISRLNPVRITVQGVEGF--R 149 Query: 93 RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG 152 +EA F ++ T+ + ++ + + + A + + + Sbjct: 150 PALEAVFNVHGGTVVVWAVHAKSRKEGDRVTEEGRRALASLLSTRARLWRQADPGCLLVI 209 Query: 153 DYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFW---- 208 ++ P + A + + + YS W Sbjct: 210 AGDMNEDPGEEKGMERGYRTALVRAASSHAREWEAAGSLVVSGMQGGQKGSWYSPWLDGR 269 Query: 209 --DYYADSWSKNKGI-RIDHIMLS------------PEATSLLHSARIDTK-------PR 246 + S+ R DHI+ S E + + + R Sbjct: 270 INTFRPGSYVYEGTWHRYDHILFSGLAPADRAGWRMKEFGCNAPDSAVASDGTPRAWNVR 329 Query: 247 GWTKPSDHTPVIVSLDIPEPRKKQQDST 274 SDH PV E ++ + Sbjct: 330 LRRGTSDHFPVWGVFRFDERERRHAPVS 357 >gi|237721042|ref|ZP_04551523.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|293372989|ref|ZP_06619358.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CMC 3f] gi|229449877|gb|EEO55668.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|292632057|gb|EFF50666.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CMC 3f] Length = 365 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 45/272 (16%), Positives = 81/272 (29%), Gaps = 33/272 (12%) Query: 3 VVTVATWNVNSIR------ARIHNLAAWIKENNPDIICLQETKTEDK---NFPFETLQSL 53 V+TVAT+NV++ + +A++++ DI+C QE D+ + + L + Sbjct: 109 VLTVATYNVDAFNHEHTGYSC-KEIASYMRNLQADILCFQEFGINDEFGIDSIYAALSNW 167 Query: 54 NYHIETCGQKSYNGV------AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107 YH + N + K + + I L T + L+ Sbjct: 168 PYHYIPSSPEGKNLLQLAVFSRYPIKEEHLIIYPDSKNCSLACDIEINGRTIRLFNNHLQ 227 Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167 + + DD L E D Y + Sbjct: 228 TTEVSQNKRKLEKGLRTDDSQRVEHAALGLIDGLHENFRKRAVQADLLKQLIAASPYPTL 287 Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227 + D + R+ H + + ++ +RID+I+ Sbjct: 288 V-CGDFNSLPSSYVYHTIKGDKLQDGFQRSGHGYMYTFKYF---------KHLLRIDYIL 337 Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 SPE S SDH PV++ Sbjct: 338 HSPELNST-------DYFSPDLNYSDHNPVVM 362 >gi|149236269|ref|XP_001524012.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] gi|146452388|gb|EDK46644.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] Length = 600 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 31/226 (13%), Positives = 61/226 (26%), Gaps = 30/226 (13%) Query: 4 VTVATWNV-------------NS------IRARIHNLAAWIKENNPDIICLQET-KTEDK 43 V + ++N+ N IR L A ++ +PDI+CLQE K + Sbjct: 119 VKIMSYNILAQCLIRRSLFPTNGKILKWYIR--KEILLAELRWYDPDILCLQECDKLQFH 176 Query: 44 NFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 NF L L Y + + N +++ I ++ H D + ++A Sbjct: 177 NFWQSELAKLGYECKFHRYNTKNHGLVIAYKTEIFLIKHQSFIKYDQDVKPLKANCKA-G 235 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 + + P + + + + Sbjct: 236 EASEVNQDCDRVELPPARIQTKNVGFMCYLEFKQSVLERFPYLKQRNGVIIGTTHAFWHP 295 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWD 209 + L + F + + YSF+ Sbjct: 296 FGTYDRTRQMYIILHKFREFHHTMQVLSKNKFPF-------YSFFT 334 >gi|301311917|ref|ZP_07217839.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 20_3] gi|300830019|gb|EFK60667.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 20_3] Length = 287 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 38/269 (14%), Positives = 74/269 (27%), Gaps = 22/269 (8%) Query: 4 VTVATWNV---NS------IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 + V ++N+ NS + R A +K + D+ QE N + L Sbjct: 27 MNVMSYNIRYDNSGDKDNQWKFRRDFAADLVKFHEADVFGAQEVLNNQLNDLLDRLPEYA 86 Query: 55 YHIETCGQKSYNGVA--ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 Y G I + + + + + + + + Sbjct: 87 YVGVGREDGKTKGEYAPIFYRKDRFSVEKSGNFWLAEDINAVGKKGWDAACERVATWAIL 146 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 + + + + R L LE+ + + II P Sbjct: 147 KDKNTGKKFFFLNTHLDHMGKVARHEGASLVLEQAKKLSENLPIIVTGDFNAVPSDEPIQ 206 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 + A ++F D+ + K + ID+I + Sbjct: 207 VLTNPSDPR-------HLTHSRTIAGFTYGPEWTFHDFGKIPYDK-REW-IDYIFVKGNI 257 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + + T+ PSDH PVI +L Sbjct: 258 --KVLRHGVLTETLNNLFPSDHCPVISTL 284 >gi|6320856|ref|NP_010935.1| Isc1p [Saccharomyces cerevisiae S288c] gi|731443|sp|P40015|ISC1_YEAST RecName: Full=Inositol phosphosphingolipids phospholipase C; Short=IPS phospholipase C; Short=IPS-PLC; AltName: Full=Neutral sphingomyelinase; Short=N-SMase; Short=nSMase gi|603611|gb|AAB64552.1| Yer019wp [Saccharomyces cerevisiae] gi|285811643|tpg|DAA07671.1| TPA: Isc1p [Saccharomyces cerevisiae S288c] Length = 477 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 37/268 (13%), Positives = 77/268 (28%), Gaps = 19/268 (7%) Query: 26 KENNPDIICLQETKTEDK--NFPFETLQSLNYH-IETCGQKSYNGVAILSKYQPIEIVTH 82 + + D+I LQE + Y + G + G+AILSK + Sbjct: 89 ENEDYDVIALQEIWCVEDWKYLASACASKYPYQRLFHSGILTGPGLAILSKVPIESTFLY 148 Query: 83 LPGDDLDVQARFIEATFTINTQTLRI------------GNLYLPHGNPITSTKYDDKISW 130 + A F + + + + +++ P+ + + Sbjct: 149 RFPINGRPSAVFRGDWYVGKSIAITVLNTGTRPIAIMNSHMHAPYAKQGDAAYLCHRSCQ 208 Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG 190 F R + +I GD N P ++ Sbjct: 209 AWDFSRLIKLYRQAGYAVIVVGDLNSRPGSLPHKFLTQEAGLVDSWEQLHGKQDLAVIAR 268 Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR---G 247 + + S + + ++ R+D+ ++ P+ + A + R Sbjct: 269 LSPLQQLLKGCTTCDSLLNTWRAQRQPDEACRLDYALIDPDFLQTV-DAGVRFTERIPHL 327 Query: 248 WTKPSDHTPVIVSLDIPEPRKKQQDSTS 275 SDH +L+I + + STS Sbjct: 328 DCSVSDHFAYSCTLNIVPQGTESRPSTS 355 >gi|294501930|ref|YP_003565630.1| endonuclease/exonuclease/phosphatase family protein [Bacillus megaterium QM B1551] gi|295707279|ref|YP_003600354.1| endonuclease/exonuclease/phosphatase family protein [Bacillus megaterium DSM 319] gi|294351867|gb|ADE72196.1| endonuclease/exonuclease/phosphatase family protein [Bacillus megaterium QM B1551] gi|294804938|gb|ADF42004.1| endonuclease/exonuclease/phosphatase family protein [Bacillus megaterium DSM 319] Length = 261 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 40/265 (15%), Positives = 85/265 (32%), Gaps = 14/265 (5%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET--KTEDKNFPFETLQSLNYH 56 + + T N +S + ++ LA IK+ D+I LQE K D + ++ ++S NY Sbjct: 1 MKLLTLNCHSWQEENQLDKLSCLAEVIKKEKYDVIALQEVSQKV-DAPYVYDYIRSDNYA 59 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 + G + I + + + + + + Y Sbjct: 60 WLLAKELGKQGEDYQLVWDLSHIGYEVYEEGIAILTKHPIIEEHSFFVSQTSNIDYWKTR 119 Query: 117 NPIT-STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + + +Y+ ++ E + + + + + NDA Sbjct: 120 RIVGATIEYEKELLTFYSCHLGWWDDEEEPFKQQVDTLLAHVHKDNPFFLLGDFNNDAHR 179 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E + L + G D ++ + A + +R+D I+ S Sbjct: 180 RNEG---YDYLLSQGLYDTYTLSNKKDSGITVKGNIAGWDDNERALRLDLILSSH--AQD 234 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVS 260 + S+ + + SDH V V Sbjct: 235 IQSSTVVFNGIHYPVVSDHFGVSVE 259 >gi|91776730|ref|YP_546486.1| endonuclease/exonuclease/phosphatase [Methylobacillus flagellatus KT] gi|91710717|gb|ABE50645.1| Endonuclease/exonuclease/phosphatase [Methylobacillus flagellatus KT] Length = 251 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 28/266 (10%), Positives = 66/266 (24%), Gaps = 26/266 (9%) Query: 2 SVVTVATWNVN----SIRAR--IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55 SV+ +AT+N++ S AR +H I++ D++ LQE + + + Sbjct: 3 SVIRIATFNIHKGVTSFNARFALHEQRELIRKLQADVVFLQEVR--------DQHIKHSR 54 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + + + + + + + I Sbjct: 55 RFSAWPLAGQVEFLADAVWSDYAYGKNSVYPAGHHGNALLSKYPIVKYENIDISAHQSEQ 114 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + + L + + F Sbjct: 115 RGML-HGEIAVPGWHQPLHCICVHLGLFAGWRRKQIAILRKQIEEVVPKDAP-LVIAGDF 172 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 + ++L + + H + + + R+D I + Sbjct: 173 NDWSMSAGRELVHGLHLQEVFEHHSGGKPARSFPSFLPLF------RLDRIYVRGF---H 223 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 + + P+ K SDH + L Sbjct: 224 VRHVEVHAGPQFM-KVSDHAALTAVL 248 >gi|299532507|ref|ZP_07045897.1| Endonuclease/exonuclease/phosphatase [Comamonas testosteroni S44] gi|298719454|gb|EFI60421.1| Endonuclease/exonuclease/phosphatase [Comamonas testosteroni S44] Length = 291 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 43/303 (14%), Positives = 91/303 (30%), Gaps = 58/303 (19%) Query: 4 VTVATWNV------NSIRARIHNLAAWIK----ENNPDIICLQETKTEDKNF---PFETL 50 + + TWNV + + + + ++ D++CLQE + P + L Sbjct: 1 MNILTWNVQWCCGMDGLVSVERIVRHALQMGEQSGGLDVLCLQEIAVNYPDLQGRPGDQL 60 Query: 51 QSL-----NYHIET--------CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA 97 L + I G I ++ + + +L R ++ Sbjct: 61 AELKALLPGWQIFFGASVDEFTSSGHQRFGNLIATRLPVLLVQHYLLPMPAQADMRCMQR 120 Query: 98 TFTINTQ------TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFAS------------ 139 ++ T +RI +L + + + ++ + Sbjct: 121 MCSVVTVDDAALGPVRIMTTHLEYFSARQRMAQAGALRALQMQACALADAPPQPASDGSP 180 Query: 140 -QRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT 198 Q + GD+N P + V LQ + ++ Sbjct: 181 YQTKPHTRHAVLCGDFNFEPHEPEYA--------VLSAPWVAGEEGCLQAGQWRNSWDVL 232 Query: 199 HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVI 258 + + +W G D I +S +H+ +D+ T+ SDH PV+ Sbjct: 233 YPGQPQPPTFRLVDRTWGAEPGA-CDLIWVSDSLCQRVHTWSVDSA----TQASDHQPVM 287 Query: 259 VSL 261 ++L Sbjct: 288 LTL 290 >gi|284033951|ref|YP_003383882.1| endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836] gi|283813244|gb|ADB35083.1| Endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836] Length = 293 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 40/275 (14%), Positives = 80/275 (29%), Gaps = 36/275 (13%) Query: 4 VTVATWNVN-SIRARIHNLAAW------IKENNPDIICLQET------KTEDKNFPFETL 50 + VAT+N++ A N+ ++ + D+I LQE +++ ++ E Sbjct: 32 LRVATYNIHAG--AGHDNVFDLDRTETTLRALDADVIGLQEVDVHWSERSQWRDLVSELA 89 Query: 51 QSLNYH--IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108 Q L + + +++ P ++ +T + Sbjct: 90 QRLGMRAGFAPIYDFDPLRAGEPRRQYGLAVLSKAPILEVQNHNLTRLSTQDPGAGPTPM 149 Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168 + + R + E I A D + Sbjct: 150 PGFLEAVVQAKGARLHFYVTHLDYRADPSLRRTEVDETLKILADD-----PAGANQVLVG 204 Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 N E+ + + + + I + Y A + K RID+I + Sbjct: 205 DLNAEPQAAELARLWPAMTDAWTAAPITTGNPL-------TYPAATPVK----RIDYITV 253 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 S + A + P SDH PV+ L + Sbjct: 254 SDGVG--VLRAEVPASP-ALLAASDHRPVVADLAL 285 >gi|171060686|ref|YP_001793035.1| endonuclease/exonuclease/phosphatase [Leptothrix cholodnii SP-6] gi|170778131|gb|ACB36270.1| Endonuclease/exonuclease/phosphatase [Leptothrix cholodnii SP-6] Length = 276 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 43/288 (14%), Positives = 84/288 (29%), Gaps = 67/288 (23%) Query: 2 SVVTVATWNVN-SIR-------ARIHNLAAWIKENNPDIICLQETKT------------- 40 S + VAT+N++ +R IHNL ++ + D++CLQE + Sbjct: 27 SRLRVATYNIHKGVRGMGPQKRLEIHNLGMGVQALDADLVCLQEVRLFHHGDANRFDHTH 86 Query: 41 --EDKNFPFETLQSLNYHIETCGQK----SYNGVAILSKYQPIEIVTHLPGDDLDVQARF 94 K E L Y +G A+LS++ ++ H D Q Sbjct: 87 FGWPKQGQAEFLAPEGYESAYRTNAVTRGGEHGNALLSRWPLGDVGHHDVSDHRFEQRGL 146 Query: 95 IEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDY 154 + + T+ + + + + +I + + + + + Sbjct: 147 LHTMVQWHGVTVHTIVAHFGLIHASRVRQAERLGDYIDAKIPRGALVVVAGDFNDWGERL 206 Query: 155 NIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADS 214 + P DA S L + +Y+ Sbjct: 207 D--PIIGAAGLQRAAPPDARRGPLTFPSRMPLFAL------------DRVYT-------- 244 Query: 215 WSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 +G+R + W + SDH P++V L+ Sbjct: 245 ----RGLR-------------CADTFVPRGA-AWARMSDHLPLVVELE 274 >gi|322824803|gb|EFZ30090.1| RNA-editing complex protein MP100, putative [Trypanosoma cruzi] Length = 968 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 33/292 (11%), Positives = 68/292 (23%), Gaps = 47/292 (16%) Query: 2 SVVTVATWNV-------------------NSIRARIHNLAAWIKENNPDIICLQETKTED 42 + + TWNV S + R LA I++ + D++ +QE Sbjct: 692 KTLKLLTWNVMFDRYSGKPTPLGMPGIDWCSPK-RYPVLARVIQQEDADVVGMQEV---- 746 Query: 43 KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIE-IVTHLPGDDLDVQARFIEATFTI 101 + +E L + E +S + + + T + Sbjct: 747 EPVFWEFLSKQPWMRENYYFSCGYTSPSISPWGVLMLVHRRRFPVQSITYLNVPAWTNHV 806 Query: 102 NTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161 + + L + + + L GD + + Sbjct: 807 SLMPVVCLQLPHGPVHVAAAHLLAPYTKSHETARTSQDSALRHHMLKTLTGDVVTMGDFN 866 Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI 221 D ++ D F+ Sbjct: 867 DWPTNEFLMPAESQYVDCWPLIYPHDAGKTMDETNTFCKLKVEEMFFG------------ 914 Query: 222 RID-HIMLSPEATS---------LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 R D + S ++ + G+ PSDH V ++ + Sbjct: 915 RSDKLFLRSRRLAPVEGHLVGTKSVNDENGNKDAPGYLFPSDHYGVSMTFAL 966 >gi|296863686|pdb|3MPR|A Chain A, Crystal Structure Of EndonucleaseEXONUCLEASEPHOSPHATASE FA Protein From Bacteroides Thetaiotaomicron, Northeast Struct Genomics Consortium Target Btr318a gi|296863687|pdb|3MPR|B Chain B, Crystal Structure Of EndonucleaseEXONUCLEASEPHOSPHATASE FA Protein From Bacteroides Thetaiotaomicron, Northeast Struct Genomics Consortium Target Btr318a gi|296863688|pdb|3MPR|C Chain C, Crystal Structure Of EndonucleaseEXONUCLEASEPHOSPHATASE FA Protein From Bacteroides Thetaiotaomicron, Northeast Struct Genomics Consortium Target Btr318a gi|296863689|pdb|3MPR|D Chain D, Crystal Structure Of EndonucleaseEXONUCLEASEPHOSPHATASE FA Protein From Bacteroides Thetaiotaomicron, Northeast Struct Genomics Consortium Target Btr318a Length = 298 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 42/294 (14%), Positives = 78/294 (26%), Gaps = 45/294 (15%) Query: 2 SVVTVATWNV-----------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETL 50 + +TVA++N+ + R +A ++ ++ DI QE E L Sbjct: 5 TSLTVASYNLRNANGSDSARGDGWGQRYPVIAQXVQYHDFDIFGTQECFLHQLKDXKEAL 64 Query: 51 QSLNY-HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 +Y + K + + + L + + Sbjct: 65 PGYDYIGVGRDDGKDKGEHSAIFYRTDKFDIVEKGDFWLSETPDVPSKGWDAVLPRICSW 124 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 + ++ I + R S L E+ N+ Sbjct: 125 GHFKCKDTGFEFLFFNLHXDHIGKKARVESAFLVQEKXKELGRGKNLP------AILTGD 178 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 N K + + + ++ +D +S+++ RIDHI +S Sbjct: 179 FNVDQTHQSYDAFVSKGVLCDSYEKCDYRYALNGTFNNFD--PNSFTE---SRIDHIFVS 233 Query: 230 PEA--------------------TSLLHSA--RIDTKPRGWTKPSDHTPVIVSL 261 P + I K PSDH PV V L Sbjct: 234 PSFHVKRYGVLTDTYRSVRENSKKEDVRDCPEEITIKAYEARTPSDHFPVKVEL 287 >gi|224049325|ref|XP_002191825.1| PREDICTED: CCR4 carbon catabolite repression 4-like [Taeniopygia guttata] Length = 425 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 34/264 (12%), Positives = 70/264 (26%), Gaps = 28/264 (10%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFP--FETLQSLNYHIETCGQKSYNGVAILSKYQPIE 78 + I PDI+CLQE D F L L Y + S +E Sbjct: 173 ILEEILAYKPDILCLQEV---DHYFDTFEPLLSRLGYQCTFFPKP-------WSPCLDVE 222 Query: 79 IVTHLPGDDLDVQARFIEATFT--INTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 G + E + I +++ + + + L+ Sbjct: 223 HNNGPDGCAMFFLKERFELVNSANIRLMAMKLKTNQVAIAQTLKCHETGRLFCIAVTHLK 282 Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN----MGFT 192 + N+ P+I D + + Sbjct: 283 ARTGWERFRSAQGCDLLQNLKNITQGAKIPLIVCGDFNAEPTEEVYREFSNSSLNLNSAY 342 Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR------ 246 + + Y+ W ++ +D+I S A ++ + + T+ + Sbjct: 343 KLLSPDGQSEPPYTTWKIRPSGECRHT---LDYIWYSQHALNVNSALGLLTEEQIGPNRL 399 Query: 247 -GWTKPSDHTPVIVSLDIPEPRKK 269 + PSDH ++ + + Sbjct: 400 PSFNYPSDHLSLVCDFSFNQDPDR 423 >gi|154276646|ref|XP_001539168.1| predicted protein [Ajellomyces capsulatus NAm1] gi|150414241|gb|EDN09606.1| predicted protein [Ajellomyces capsulatus NAm1] Length = 1913 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 37/278 (13%), Positives = 77/278 (27%), Gaps = 44/278 (15%) Query: 4 VTVATWNVNSIRARIHNLAAWIKE---NNPDIICLQETKTEDKNFP-FETLQSLNYHIET 59 + + +NV ++R LA+ + + DI+ +QE P +YH Sbjct: 646 LRILQYNV--WKSRDVVLASLFQNRKILDYDILAIQE--------PWRNPFIETSYHPLK 695 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 + ++ PG I+ + + L G + Sbjct: 696 AQFQLTYLANAATRVCLYISKRINPGTWSVSY---------ISKDIISLQILNPHSGRKV 746 Query: 120 TSTK-YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + Y++ + + A + L E +I GD+N+ + Sbjct: 747 SVFNVYNEVGTDTLSTMAEAIRALNSPEDIIVLGDFNLHHPLWSSTHRHGGRG-----PS 801 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 + ++ + TH K+ ID S + + Sbjct: 802 AQGLLTVIEEFQLQLLTKPGTPTH------------RWKDGESTIDLTFASEDLADRVTH 849 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQ 276 ++D + SDH P+ + D Sbjct: 850 CKVDREV---DCDSDHLPIALVFDWNWQPANPTRKRLW 884 >gi|255551567|ref|XP_002516829.1| hydrolase, putative [Ricinus communis] gi|223543917|gb|EEF45443.1| hydrolase, putative [Ricinus communis] Length = 490 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 34/271 (12%), Positives = 72/271 (26%), Gaps = 32/271 (11%) Query: 21 LAAWIKENNPDIICLQETKTEDKNF--PFETLQ---SLNYHIETCGQKSY-NGVAILSKY 74 + ++E + D++ LQ+ K +++ P L + Y Y N + Sbjct: 220 ILEVLREVDADVLALQDVKAQEEKGMRPLSDLAASLGMKYAFAESWAPDYGNAILSKWPI 279 Query: 75 QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRF 134 + ++ +D + + L + N Sbjct: 280 KRWKVQKIANDEDFRNVLKATISVPGAGELDFYCTQLDHLNENW-------RMKQINAII 332 Query: 135 LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDA 194 S + G + D +EV + + + D Sbjct: 333 QSTNSPHVLAGGLNSLTGSDYSPERWMDIVKYYEEIGKPRPKIEVTNFLKGKEYIDAKDF 392 Query: 195 IRATHDTHHLYSFWDYYADSWSKN------KGIRIDHIMLSPEATSLLHSARIDTKPRGW 248 + + +N G R+D+++ S ++ Sbjct: 393 AGECEPVVII---------AKGQNVQGTCKYGTRVDYVLASQDSPYKFVPGS--YTVISS 441 Query: 249 TKPSDHTPVIVSLDIPEPRKKQQDSTSQNMK 279 SDH IV +DI + + Q +Q K Sbjct: 442 KGTSDHH--IVKVDITKASEANQGRQTQKAK 470 >gi|156933850|ref|YP_001437766.1| hypothetical protein ESA_01676 [Cronobacter sakazakii ATCC BAA-894] gi|156532104|gb|ABU76930.1| hypothetical protein ESA_01676 [Cronobacter sakazakii ATCC BAA-894] Length = 370 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 37/112 (33%), Gaps = 26/112 (23%) Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY--SFWDYYADSWSKNKGIRIDHIML 228 D T E L+ DA + Y ++ +S NK +D+I+L Sbjct: 266 GDFNDTPESDALAPLLKETDLRDAFTHPAFDNGGYPGTW----GNSAKNNK---LDYILL 318 Query: 229 SPEATSLLHSARIDTKPRG-WTKP----------------SDHTPVIVSLDI 263 SP + + + K +P SDH + V L+I Sbjct: 319 SPALWERVTAGGVIRKGMWPGERPVKWEVYPELKKPQQAGSDHAALWVDLNI 370 >gi|321469761|gb|EFX80740.1| hypothetical protein DAPPUDRAFT_318357 [Daphnia pulex] Length = 391 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 47/281 (16%), Positives = 74/281 (26%), Gaps = 35/281 (12%) Query: 7 ATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDK--NFPFETLQSLNYHI 57 T N I R RI + + ++ + D + LQE ED + Y Sbjct: 6 LTLNCWGIAGVSKDRRTRIDAIGSHLQLGHYDFVFLQEVWVEDDFQAIVKQVGNIFPYSH 65 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 G+ ILSK + I+++ H + + F L + N Sbjct: 66 YFHSGVIGGGICILSKAKIIDVLFHAWSLNGYIHKIQHGDWFGGKGVGLCTVVYHGMKIN 125 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 ++ + AS + I + + I D Sbjct: 126 L--------YVTHLHAEYNPASDEYCAHRVVQAFETSQFIRYTRNKADFCILGGDLNTEP 177 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTH----------HLYSFWDYYADSWSKNKGIRIDHIM 227 E + D +T + Y+ + G RID +M Sbjct: 178 ENLAYRLICDHTSLKDLYLSTGKPEIEGMTSETPANSYT---ASESLRACPNGKRIDFVM 234 Query: 228 LS--PEATSLLHSARIDTKPRGWTKP---SDHTPVIVSLDI 263 S I PR P SDH V I Sbjct: 235 CSSRKGLQIETIDVNIPLPPRIPNYPFSYSDHEAVCAKFRI 275 >gi|262383745|ref|ZP_06076881.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|262294643|gb|EEY82575.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] Length = 287 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 38/269 (14%), Positives = 74/269 (27%), Gaps = 22/269 (8%) Query: 4 VTVATWNV---NS------IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 + V ++N+ NS + R A +K + D+ QE N + L Sbjct: 27 MNVMSYNIRYDNSGDKDNQWKFRRDFAADLVKFHEADVFGAQEVLNNQLNDLLDRLPEYA 86 Query: 55 YHIETCGQKSYNGVA--ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 Y G I + + + + + + + + Sbjct: 87 YVGVGREDGKTKGEYAPIFYRKDRFSVEKSGNFWLAEDINAVGKKGWDAACERVATWAIL 146 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 + + + + R L LE+ + + II P Sbjct: 147 KDKNTGKKFFFLNTHLDHMGKVARHEGASLVLEQAKKLSENLPIIVTGDFNAVPSDEPIQ 206 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 + A ++F D+ + K + ID+I + Sbjct: 207 VLTNPSDPR-------HLTHSRTIAGFTYGPEWTFHDFGKIPYDK-REW-IDYIFVKGNI 257 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + + T+ PSDH PVI +L Sbjct: 258 --KVLRHGVLTETLNNLFPSDHCPVISTL 284 >gi|258542290|ref|YP_003187723.1| hypothetical protein APA01_11960 [Acetobacter pasteurianus IFO 3283-01] gi|256633368|dbj|BAH99343.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01] gi|256636427|dbj|BAI02396.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-03] gi|256639480|dbj|BAI05442.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-07] gi|256642536|dbj|BAI08491.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-22] gi|256645591|dbj|BAI11539.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-26] gi|256648644|dbj|BAI14585.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-32] gi|256651697|dbj|BAI17631.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654688|dbj|BAI20615.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-12] Length = 227 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 47/129 (36%), Gaps = 11/129 (8%) Query: 1 MSVVTVATWNVNSIR---ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57 M V V +WN+ +R A +H++AA I+ PD++ +QE E P ++ Sbjct: 25 MEGVRVISWNL--LRRTGATVHDIAALIEAEKPDVLLMQEATVEIDVLPDVIG---GHYA 79 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 +GVA S+ F I + + N++L HG Sbjct: 80 RNPQPGRIHGVACWSRIPFARAPRACTI---PSGPLFKRHAQIIEYEKFSLANVHLSHGQ 136 Query: 118 PITSTKYDD 126 + + Sbjct: 137 MLNRKQLRR 145 >gi|147796513|emb|CAN68153.1| hypothetical protein VITISV_009302 [Vitis vinifera] Length = 1323 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 3/42 (7%) Query: 1 MS-VVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETK 39 MS + + WN + +R + +++ N D++ +QETK Sbjct: 288 MSFSMKIINWNTRGLGSRNKRRVVKDFLRSENSDVVMIQETK 329 >gi|156376989|ref|XP_001630640.1| predicted protein [Nematostella vectensis] gi|156217665|gb|EDO38577.1| predicted protein [Nematostella vectensis] Length = 145 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 5/43 (11%) Query: 1 MSVVTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQET 38 + + TWNV+ + R R + IK + PDI+ LQE Sbjct: 89 LRNLKFLTWNVDGLDQKNLRPRTQAVIDLIKSHKPDIVYLQEV 131 >gi|149926631|ref|ZP_01914891.1| predicted endonuclease / exonuclease / phosphatase family protein [Limnobacter sp. MED105] gi|149824560|gb|EDM83776.1| predicted endonuclease / exonuclease / phosphatase family protein [Limnobacter sp. MED105] Length = 264 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 33/269 (12%), Positives = 61/269 (22%), Gaps = 21/269 (7%) Query: 4 VTVATWNVN----SIR---ARIHNLAAWIKENNPDIICLQET--KTEDKNFPFETLQSLN 54 + +AT+N++ +R IH L I N D++ LQE + + FE Sbjct: 3 LRIATYNIHKGVMGLRKPALTIHALREQIHAMNADLVFLQEVQGRHDRHAGKFEHWPEGG 62 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 H S + Q + + L Sbjct: 63 QHEFLAQSPSAIDDLLGHASQQYFTAYGMNAVYSHGHHGNALLSRYEIEWML-----NQD 117 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 + + + H + Sbjct: 118 VSDHRLEQRGLLHCCVKTPAGPIHAMVAHFGLLYRSRVRQASKLIEHVGTHVPAGMPLVV 177 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEAT 233 + + S+ + + +D + Sbjct: 178 AGDFNDWQRRLGPILQQGLKAEEVMPLDKKNRL--ARVGSFPSRFPVLGLDRVFARGF-- 233 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 +H A + P W K SDH P +V L+ Sbjct: 234 -KVHEATVLHGP-AWAKLSDHAPFVVDLE 260 >gi|326569254|gb|EGE19315.1| endonuclease/exonuclease/phosphatase [Moraxella catarrhalis BC7] gi|326575442|gb|EGE25367.1| endonuclease/exonuclease/phosphatase [Moraxella catarrhalis 101P30B1] Length = 249 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 36/270 (13%), Positives = 70/270 (25%), Gaps = 39/270 (14%) Query: 1 MSVVTVATWNV-------NSIRARIHNLAAWIKENNPDIICLQETKTEDKN--FPFETLQ 51 M +T+ ++N+ N + R+ + + + NPDI+CLQE + ++ F Sbjct: 1 MKSITITSYNIHKGMSPTNRL-VRLMGMKDALLKTNPDILCLQEVQGQNLKRTIDFAEFP 59 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 H + + + L I Sbjct: 60 DGGQHEWFGEFLGIAS----------SYGKNAEYEHGHHGNAVLSRHPLDPKHNLNITVN 109 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 L + + D L L + + + I + Sbjct: 110 RLEKRGVLHCEVHPDGWRRPVVVLCCHLNLLHRDRIKQYQAIRDYIFTLPADASL----- 164 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY--SFWDYYADSWSKNKGIRIDHIMLS 229 S + Q + H Y +F + +D I + Sbjct: 165 -ILAGDFNDWSKKSCQALSSLGLSEVFLQVHGEYPATFPAKMPV-------LSLDRIYV- 215 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 +H+A + W+ SDH P+ Sbjct: 216 RRL--KVHNAMVHGGV-PWSNLSDHLPISA 242 >gi|92859618|ref|NP_003071.2| sphingomyelin phosphodiesterase 2 [Homo sapiens] gi|160332206|sp|O60906|NSMA_HUMAN RecName: Full=Sphingomyelin phosphodiesterase 2; AltName: Full=Lyso-platelet-activating factor-phospholipase C; Short=Lyso-PAF-PLC; AltName: Full=Neutral sphingomyelinase; Short=N-SMase; Short=nSMase gi|56203787|emb|CAI23338.1| sphingomyelin phosphodiesterase 2, neutral membrane (neutral sphingomyelinase) [Homo sapiens] Length = 423 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 44/297 (14%), Positives = 90/297 (30%), Gaps = 37/297 (12%) Query: 4 VTVATWNVNSI------RA-RIHNLAAWIKENNPDIICLQETKT-EDKNFPFETLQS-LN 54 + + N I RA R+ L ++ + + D+ L+E + +D + + L Sbjct: 9 LRIFNLNCWGIPYLSKHRADRMRRLGDFLNQESFDLALLEEVWSEQDFQYLRQKLSPTYP 68 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN---- 110 +G+ + SK+ E+ H+ + F+ L + + Sbjct: 69 AAHHFRSGIIGSGLCVFSKHPIQELTQHIYTLNGYPYMIHHGDWFSGKAVGLLVLHLSGM 128 Query: 111 -------LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 N +++ +F + + ++ GD N+ P+ C Sbjct: 129 VLNAYVTHLHAEYNRQKDIYLAHRVAQAWELAQFIHHTSKKADVVLLCGDLNMHPEDLGC 188 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223 W LE R + G+RI Sbjct: 189 CLLKEWTGLHDAYLETRDFKGSEEGNTMVPKNCYVSQQEL-----------KPFPFGVRI 237 Query: 224 DHIM---LSPEATSLLHSARIDT--KPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTS 275 D+++ +S S T P T SDH ++ +L + +Q S++ Sbjct: 238 DYVLYKAVS-GFYISCKSFETTTGFDPHRGTPLSDHEALMATLFVRHSPPQQNPSST 293 >gi|288962299|ref|YP_003452594.1| hypothetical protein AZL_d02240 [Azospirillum sp. B510] gi|288914565|dbj|BAI76050.1| hypothetical protein AZL_d02240 [Azospirillum sp. B510] Length = 269 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 39/269 (14%), Positives = 72/269 (26%), Gaps = 42/269 (15%) Query: 1 MSVVTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55 M+ +VATWN++S R +A I++ + D+I LQE ++ Sbjct: 38 MTAFSVATWNIHSCVGLDARFAPDRVAQVIRDLDVDLIGLQEV-------------GWHH 84 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 E+ + H ++ L +G Sbjct: 85 RGESGMDQFAFLEQHTGLKAYAAPTKHSARAHYGNCLLTRLPVRSMEPIDLSVGKREPRG 144 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 G + I L + I + P + Sbjct: 145 GIDAVIEVRGRPVRVIVAHLGLDPWERAKQVSDIVSRVERQPALPTLFMGDLNEW--TPS 202 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 + +RQ ++ + A T +R+D I ++ Sbjct: 203 SPRLRQLASSFADVANPRSFHARMPT-------------------LRLDRIYVTGGL--Q 241 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 + + + + SDH PV L IP Sbjct: 242 IPAFEVVRTIL-TRRASDHLPVRAVLAIP 269 >gi|148379569|ref|YP_001254110.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum A str. ATCC 3502] gi|153934095|ref|YP_001383947.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum A str. ATCC 19397] gi|148289053|emb|CAL83143.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum A str. ATCC 3502] gi|152930139|gb|ABS35639.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum A str. ATCC 19397] Length = 263 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 34/274 (12%), Positives = 74/274 (27%), Gaps = 25/274 (9%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYHI 57 + + T N +S + +I LA I ENN D+I LQE ++ + F+ ++ N+ Sbjct: 1 MKILTLNCHSWQEEKQLEKIKYLAKVIYENNYDVIALQEVSQSINSKILFDNIKEDNFAF 60 Query: 58 E-TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT-------QTLRIG 109 + + I + L + + + Sbjct: 61 ILIKELEKLGENRFKILWDFAHIGYDKYEEGLAILTKHPIKEKKSFYISKSKDKNFWKTR 120 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 + + + Y + ++ + + + D N Sbjct: 121 KIIKCKIDYNNNPIYFYSCHLGWWDDEEEDFKFQVNKLVQELKEKETCILMGDYNNDAFL 180 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 N L ++ D + K +R+D I+ + Sbjct: 181 NNKGYDYLINKKLKDIYHLARSKDNGVTAIGDIDGW---------KGNTKDMRLDLILSN 231 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + ++ SDH V ++I Sbjct: 232 KNL--KVEYCKVIFNGIRKEIISDHFGVEAKIEI 263 >gi|237716270|ref|ZP_04546751.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262407875|ref|ZP_06084423.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294807694|ref|ZP_06766487.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides xylanisolvens SD CC 1b] gi|229443917|gb|EEO49708.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262354683|gb|EEZ03775.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294445130|gb|EFG13804.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides xylanisolvens SD CC 1b] gi|295084435|emb|CBK65958.1| Metal-dependent hydrolase [Bacteroides xylanisolvens XB1A] Length = 365 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 44/272 (16%), Positives = 79/272 (29%), Gaps = 33/272 (12%) Query: 3 VVTVATWNVNSIR------ARIHNLAAWIKENNPDIICLQETKTEDK---NFPFETLQSL 53 V+TVAT+NV++ + +A++++ DI+C QE D+ + L + Sbjct: 109 VLTVATYNVDAFNHEHTGYSC-KEIASYMRNLQADILCFQEFGINDEFGIDSISAALSNW 167 Query: 54 NYHIETCGQKSYNGV------AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107 YH + N + K + + I L T + L+ Sbjct: 168 PYHYIPSSPEGKNLLQLAVFSRYPIKEEHLIIYPDSKNCSLACDIEINGRTIRLFNNHLQ 227 Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167 + + DD L E D Y + Sbjct: 228 TTEVSQNKRKLEKGLRTDDSQRVEHATLGLIDGLHENFRKRAVQADLLKQLIAASPYPTL 287 Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227 + D + + H + + ++ +RID+I+ Sbjct: 288 V-CGDFNSLPSSYVYHTIKGDKLQDGFQTSGHGYMYTFKYF---------KHLLRIDYIL 337 Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 SPE S SDH PV++ Sbjct: 338 HSPELNST-------DYFSPDLNYSDHNPVVM 362 >gi|167569725|ref|ZP_02362599.1| endonuclease/exonuclease/phosphatase family superfamily protein [Burkholderia oklahomensis C6786] Length = 286 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 36/292 (12%), Positives = 74/292 (25%), Gaps = 43/292 (14%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNP-------DIICLQET----KT-----EDKNFPF 47 + + +WN+ R + + D++C+QE + D + Sbjct: 1 MRLISWNIQWGRDA-DGTVDLARTIDAARRLVDFDVLCMQEVTRGFRALPGGPSDDQYAE 59 Query: 48 ETLQSLNYHIE--------TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF 99 Y + + + + + + A Sbjct: 60 LAALLPGYSVFDAIGVDLPPLEPGAPRRQFGNALATRLPVER---VMRHALPWPASAAAP 116 Query: 100 TINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIF--------- 150 ++ L + + T + + + A +RL E Sbjct: 117 SMPRCALEVTLRAPLGALRVVVTHLEYYSAEQRLAQVDALRRLHREAAAHTRASAPPETP 176 Query: 151 AGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL-YSFWD 209 G + + D + + R F DA A H + Sbjct: 177 TGPFAPSARAADAIVCGDFNSAYRSDAYRRFLAPFPDAPRFVDAWLARHPGETPPMTAGV 236 Query: 210 YYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 Y + W + + D ++ L ID G + SDH P+ + L Sbjct: 237 YDTEQWKEGP-LTCDFAFVTDTLIGRLSRCEID----GAVRASDHQPIALEL 283 >gi|147858484|emb|CAN79230.1| hypothetical protein VITISV_033954 [Vitis vinifera] Length = 876 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 30/258 (11%), Positives = 67/258 (25%), Gaps = 58/258 (22%) Query: 5 TVATWNVNSIRAR--IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + +WNV + + ++IK D++CLQETK ++ L+SL Sbjct: 344 RLLSWNVRGANXKDKRKXIKSFIKSQMVDVVCLQETKIKE--MTIGLLRSLG----VGRH 397 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 ++ V + I + + + Sbjct: 398 LDWSAVNSRGATRGILVFWDNRVF------------------------------DLVDLG 427 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K + IS + + Y + N+ +R Sbjct: 428 KGEYSISCCFKNCEDGVLWEFTGVYGLVCRRKIEDFWEELGYGRRVTFNNEEIFRSIRGF 487 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG-IRIDHIMLSPEATSLLHSARI 241 + + +++ N+ R+D +++ L + Sbjct: 488 GAEGHPL-----------AGGPFTW-----RGRLNNQSQSRLDPFLVTDNW-DNLFDGFV 530 Query: 242 DTKPRGWTKPSDHTPVIV 259 DH P+++ Sbjct: 531 QGVLPKPVL--DHFPILL 546 >gi|323355424|gb|EGA87248.1| Isc1p [Saccharomyces cerevisiae VL3] Length = 477 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 37/268 (13%), Positives = 77/268 (28%), Gaps = 19/268 (7%) Query: 26 KENNPDIICLQETKTEDK--NFPFETLQSLNYH-IETCGQKSYNGVAILSKYQPIEIVTH 82 + + D+I LQE + Y + G + G+AILSK + Sbjct: 89 ENEDYDVIALQEIWCVEDWKYLASACASKYPYQRLFHSGILTGPGLAILSKVPIESTFLY 148 Query: 83 LPGDDLDVQARFIEATFTINTQTLRI------------GNLYLPHGNPITSTKYDDKISW 130 + A F + + + + +++ P+ + + Sbjct: 149 RFPINGRPSAVFRGDWYVGKSIAITVLNTGTRPIAIMNSHMHAPYAKQGDAAYLCHRSCQ 208 Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG 190 F R + +I GD N P ++ Sbjct: 209 AWDFSRLIKLYRQAGYAVIVVGDLNSRPGSLPHKFLTQEAGLVDSWEQLHGKQDLAVIAR 268 Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR---G 247 + + S + + ++ R+D+ ++ P+ + A + R Sbjct: 269 LSPLQQLLKGCTTCDSLLNTWRAQRQPDEACRLDYALIDPDFLQTV-DAGVRFTERIPHL 327 Query: 248 WTKPSDHTPVIVSLDIPEPRKKQQDSTS 275 SDH +L+I + + STS Sbjct: 328 DCSVSDHFAYSCTLNIVPXGTESRPSTS 355 >gi|154280320|ref|XP_001540973.1| predicted protein [Ajellomyces capsulatus NAm1] gi|150412916|gb|EDN08303.1| predicted protein [Ajellomyces capsulatus NAm1] Length = 473 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 28/75 (37%), Gaps = 8/75 (10%) Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 + W G ID LSP L I + K SDH P+ +L++ Sbjct: 100 TTWQDRGSP-----GTTIDLTFLSPLLHDKLRRCAIAEEA---CKGSDHKPIETTLELTP 151 Query: 266 PRKKQQDSTSQNMKP 280 K+ + +N +P Sbjct: 152 IPKEAERRNWKNAEP 166 >gi|154277106|ref|XP_001539398.1| predicted protein [Ajellomyces capsulatus NAm1] gi|150414471|gb|EDN09836.1| predicted protein [Ajellomyces capsulatus NAm1] Length = 1315 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 28/75 (37%), Gaps = 8/75 (10%) Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 + W G ID LSP L I + K SDH P+ +L++ Sbjct: 467 TTWQDRGSP-----GTTIDLTFLSPLLHDKLRRCAIAEEA---CKGSDHKPIETTLELTP 518 Query: 266 PRKKQQDSTSQNMKP 280 K+ + +N +P Sbjct: 519 IPKEAERRNWKNAEP 533 >gi|154277386|ref|XP_001539534.1| predicted protein [Ajellomyces capsulatus NAm1] gi|150413119|gb|EDN08502.1| predicted protein [Ajellomyces capsulatus NAm1] Length = 1390 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 28/75 (37%), Gaps = 8/75 (10%) Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 + W G ID LSP L I + K SDH P+ +L++ Sbjct: 467 TTWQDRGSP-----GTTIDLTFLSPLLHDKLRRCAIAEEA---CKGSDHKPIETTLELTP 518 Query: 266 PRKKQQDSTSQNMKP 280 K+ + +N +P Sbjct: 519 IPKEAERRNWKNAEP 533 >gi|154273216|ref|XP_001537460.1| predicted protein [Ajellomyces capsulatus NAm1] gi|150415972|gb|EDN11316.1| predicted protein [Ajellomyces capsulatus NAm1] Length = 1306 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 28/75 (37%), Gaps = 8/75 (10%) Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 + W G ID LSP L I + K SDH P+ +L++ Sbjct: 467 TTWQDRGSP-----GTTIDLTFLSPLLHDKLRRCAIAEEA---CKGSDHKPIETTLELTP 518 Query: 266 PRKKQQDSTSQNMKP 280 K+ + +N +P Sbjct: 519 IPKEAERRNWKNAEP 533 >gi|154276770|ref|XP_001539230.1| predicted protein [Ajellomyces capsulatus NAm1] gi|150414303|gb|EDN09668.1| predicted protein [Ajellomyces capsulatus NAm1] Length = 875 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 28/75 (37%), Gaps = 8/75 (10%) Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 + W G ID LSP L I + K SDH P+ +L++ Sbjct: 497 TTWQDRGSP-----GTTIDLTFLSPLLHDKLRRCAIAEEA---CKGSDHKPIETTLELTP 548 Query: 266 PRKKQQDSTSQNMKP 280 K+ + +N +P Sbjct: 549 IPKEAERRNWKNAEP 563 >gi|154281441|ref|XP_001541533.1| predicted protein [Ajellomyces capsulatus NAm1] gi|150411712|gb|EDN07100.1| predicted protein [Ajellomyces capsulatus NAm1] Length = 1329 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 28/75 (37%), Gaps = 8/75 (10%) Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 + W G ID LSP L I + K SDH P+ +L++ Sbjct: 464 TTWQDRGSP-----GTTIDLTFLSPLLHDKLRRCAIAEEA---CKGSDHKPIETTLELTP 515 Query: 266 PRKKQQDSTSQNMKP 280 K+ + +N +P Sbjct: 516 IPKEAERRNWKNAEP 530 >gi|154278826|ref|XP_001540226.1| predicted protein [Ajellomyces capsulatus NAm1] gi|150412169|gb|EDN07556.1| predicted protein [Ajellomyces capsulatus NAm1] Length = 1356 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 28/75 (37%), Gaps = 8/75 (10%) Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 + W G ID LSP L I + K SDH P+ +L++ Sbjct: 433 TTWQDRGSP-----GTTIDLTFLSPLLHDKLRRCAIAEEA---CKGSDHKPIETTLELTP 484 Query: 266 PRKKQQDSTSQNMKP 280 K+ + +N +P Sbjct: 485 IPKEAERRNWKNAEP 499 >gi|154286678|ref|XP_001544134.1| predicted protein [Ajellomyces capsulatus NAm1] gi|150407775|gb|EDN03316.1| predicted protein [Ajellomyces capsulatus NAm1] Length = 964 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 28/75 (37%), Gaps = 8/75 (10%) Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 + W G ID LSP L I + K SDH P+ +L++ Sbjct: 516 TTWQDRGSP-----GTTIDLTFLSPLLHDKLRRCAIAEEA---CKGSDHKPIETTLELTP 567 Query: 266 PRKKQQDSTSQNMKP 280 K+ + +N +P Sbjct: 568 IPKEAERRNWKNAEP 582 >gi|154284902|ref|XP_001543246.1| predicted protein [Ajellomyces capsulatus NAm1] gi|150406887|gb|EDN02428.1| predicted protein [Ajellomyces capsulatus NAm1] Length = 1390 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 28/75 (37%), Gaps = 8/75 (10%) Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 + W G ID LSP L I + K SDH P+ +L++ Sbjct: 467 TTWQDRGSP-----GTTIDLTFLSPLLHDKLRRCAIAEEA---CKGSDHKPIETTLELTP 518 Query: 266 PRKKQQDSTSQNMKP 280 K+ + +N +P Sbjct: 519 IPKEAERRNWKNAEP 533 >gi|26344421|dbj|BAC35861.1| unnamed protein product [Mus musculus] Length = 419 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 42/281 (14%), Positives = 87/281 (30%), Gaps = 33/281 (11%) Query: 15 RA-RIHNLAAWIKENNPDIICLQETKT-EDKNFPFETLQSLNYHIETCGQKSY--NGVAI 70 RA R+ L ++ N D+ L+E + +D + + L SL Y + +G+ + Sbjct: 26 RADRMKRLGDFLNLENFDLALLEEVWSEQDFQYLRQRL-SLTYPDAHYFRSGMIGSGLCV 84 Query: 71 LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI-----------GNLYLPHGNPI 119 SK+ EI H+ + F + L + + Sbjct: 85 FSKHPIQEIFQHVYSLNGYPYMFHHGDWFCGKSVGLLVLRLSGLVLNAYVTHLHAEYSRQ 144 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + +++ +F + + ++ GD N+ P+ C W +E Sbjct: 145 KDIYFAHRVAQAWELAQFIHHTSKNADVVLLCGDLNMHPKDLGCCLLKEWTGLHDAFVET 204 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 F+ + L + GIRID+++ + Sbjct: 205 ED-FKGSDDGCTMVPKNCYVSQQDL--------GPFP--SGIRIDYVLY-KAVSEFHVCC 252 Query: 240 RIDT-----KPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTS 275 P SDH ++ +L + ++ T+ Sbjct: 253 ETLKTTTGCDPHSDKPFSDHEALMATLYVKHSPPQEDPCTA 293 >gi|328470709|gb|EGF41620.1| hypothetical protein VP10329_07912 [Vibrio parahaemolyticus 10329] Length = 293 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 37/281 (13%), Positives = 70/281 (24%), Gaps = 32/281 (11%) Query: 2 SVVTVATWNV-----NSIRARIH-----NLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51 + + + +WN+ N + L ++ + DII QE D + Sbjct: 25 NSINLTSWNIEWLSINGGKVSRTSDDFVKLNQYVDKTQADIIAFQEV---DSKAAVQKAV 81 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL--RIG 109 Y I + N + + D T + I Sbjct: 82 GDGYAIYLSDRAQSNNKHLQFSDTNQYTGFAVRKDIEVSDPADFSITRGNSKLRFASYIV 141 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 + + Q L + + + + Sbjct: 142 VNPNQKDELHLLSVHLKAGCSGAYKNSRDCQTLSQQGEALAKWVSEREKKKEQYAVMGDF 201 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 ++ + + + L N D S + IDHI++S Sbjct: 202 NHNLSYQRDWLWAIMTLGNDAQLVTRDTQADCKVR----SNKNPSKTHQFRSLIDHIIVS 257 Query: 230 PEATSL------LHSARIDTKPRGWTKPSDHTPV--IVSLD 262 P+ + S + K SDH PV V+L+ Sbjct: 258 PQIKAKNAHQTLFSSQDVLDY-----KLSDHCPVNATVTLN 293 >gi|298481016|ref|ZP_06999211.1| transmembrane endonuclease/exonuclease/phosphatase [Bacteroides sp. D22] gi|298273039|gb|EFI14605.1| transmembrane endonuclease/exonuclease/phosphatase [Bacteroides sp. D22] Length = 365 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 45/272 (16%), Positives = 81/272 (29%), Gaps = 33/272 (12%) Query: 3 VVTVATWNVNSIR------ARIHNLAAWIKENNPDIICLQETKTEDK---NFPFETLQSL 53 V+TVAT+NV++ + +A++++ DI+C QE D+ + L + Sbjct: 109 VLTVATYNVDAFNHEHTGYSC-KEIASYMRNLQADILCFQEFGINDEFGIDSISAALSNW 167 Query: 54 NYHIETCGQKSYNGV------AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107 YH + N + K + + I L T + L+ Sbjct: 168 PYHYIPSSPEGKNLLQLAVFSRYPIKEEHLIIYPDSKNCSLACDIEINGRTIRLFNNHLQ 227 Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167 + + DD L E + D Y + Sbjct: 228 TTEVSQNKRKLEKGLRTDDSQRVEHAALGLIDGLHENFQKRAVQADLLKQLIAASPYPTL 287 Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227 + D + R+ H + + ++ +RID+I+ Sbjct: 288 V-CGDFNSLPSSYVYHTIKGDKLQDGFQRSGHGYMYTFKYF---------KHLLRIDYIL 337 Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 SPE S SDH PV++ Sbjct: 338 HSPELNST-------DYFSPDLNYSDHNPVVM 362 >gi|255691864|ref|ZP_05415539.1| transmembrane endonuclease/exonuclease/phosphatase family protein [Bacteroides finegoldii DSM 17565] gi|260622589|gb|EEX45460.1| transmembrane endonuclease/exonuclease/phosphatase family protein [Bacteroides finegoldii DSM 17565] Length = 378 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 44/286 (15%), Positives = 92/286 (32%), Gaps = 41/286 (14%) Query: 3 VVTVATWNVNSIR------ARIHNLAAWIKENNPDIICLQETKTEDK-NFPF--ETLQSL 53 ++TVAT+NV++ + +A ++ DI+CLQE N + Sbjct: 109 ILTVATYNVDAFNHEYMGYSC-KGIATQMQNLQADILCLQEVGINSSFNIDSVCAAFSNW 167 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 Y + L+ + I D + + I +T+R+ N +L Sbjct: 168 PYQ-YVPSAPEGKELLQLAVFSRYPIREQSLITYPDSKNCSLWCDIEIPGRTIRLFNNHL 226 Query: 114 PHGNPITSTKYDDKISWIKRFLR------------FASQRLELEEPLIFAGDYNIIPQPH 161 + + +K + + + + R + + P P Sbjct: 227 QTTEVTRNKRELEKELYKEDTQKAERAALTLIDGLHENFRKRAGQADVLKQLIADSPHPT 286 Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH----DTHHLYSFWDYYADSWSK 217 + ++ + + ++Y+F + K Sbjct: 287 LVCGDFNSLPSSYVYHTIKGDKKGDKKGNKKGNKLQDGFQTSGHGYMYTF------KFFK 340 Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + +RID+++ SPE S D W+ SDH PV++ + + Sbjct: 341 HL-LRIDYVLHSPELKST------DYFSPDWSY-SDHNPVVMRMKL 378 >gi|323343527|ref|ZP_08083754.1| AP endonuclease domain protein [Prevotella oralis ATCC 33269] gi|323095346|gb|EFZ37920.1| AP endonuclease domain protein [Prevotella oralis ATCC 33269] Length = 361 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 34/247 (13%), Positives = 67/247 (27%), Gaps = 25/247 (10%) Query: 22 AAWIKENNPDIICLQE------TKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75 +I E N DI+CLQE K + + + + +G +L+ Y Sbjct: 123 LQFIAEQNADIVCLQEAEGWGIYKAKADSV------MNGLYQYADTSRRKDGGDVLAIYS 176 Query: 76 PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKIS---WIK 132 I+ IN T+ + N + K + K + Sbjct: 177 KYPIIKKERIVYPSKTNHSAAFYLKINGDTVIVINNHFESIGLSPEDKTNFKEMVKGDMN 236 Query: 133 RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192 + +++ + Y + Sbjct: 237 AKCVEKESKKLIDKLAEASKRRAPQVDAVAQYIYEHKRMSMILCGDFNDGPLSYTRRIMA 296 Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPS 252 ++ + Y+ + +RID+IM S + ++D + K S Sbjct: 297 KSLTDCYVESGNGIGISYHHGGFY----VRIDNIMCSNDWVPY--GCKVDNRV----KSS 346 Query: 253 DHTPVIV 259 DH P+ Sbjct: 347 DHYPIYC 353 >gi|225440718|ref|XP_002275102.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1169 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 35/263 (13%), Positives = 80/263 (30%), Gaps = 38/263 (14%) Query: 4 VTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 + + WNV + R I + ++ D++CL ETK +D Sbjct: 3 IKILCWNVRGLHDCDKRKLIKGV---VRNQKADLVCLLETKVKD---------------V 44 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA-TFTINTQTLRIGNLYLPHGN 117 + + GV + ++ G L R +E ++ + G Sbjct: 45 STQLVNSVGVGRFLNWASVDARGTAGGLLLIWDNRVLENLEVESGGYSISVRFRNCSDG- 103 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + S + + + + EE G + +N + + + Sbjct: 104 ------FSWIFSGVYGPVIGSEKEDFWEELGAIRGLWEDPWCIGGDFNAVRYPEERRNAP 157 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 + ++ + +R +++ + R+D ++S + Sbjct: 158 RLTADMRRFSEVIGELGLRDIPLAGGPFTW----IGGLNSQAASRLDRFLISDQWEDHFS 213 Query: 238 SARIDTKPRGWTKPSDHTPVIVS 260 + PR SDH+P+I+ Sbjct: 214 AISQSALPR---LVSDHSPIILE 233 >gi|302404834|ref|XP_003000254.1| endonuclease/exonuclease/phosphatase family protein [Verticillium albo-atrum VaMs.102] gi|261360911|gb|EEY23339.1| endonuclease/exonuclease/phosphatase family protein [Verticillium albo-atrum VaMs.102] Length = 298 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 32/286 (11%), Positives = 72/286 (25%), Gaps = 28/286 (9%) Query: 4 VTVATWNV---------N--SIRARIHNL---AAWIKE-NN-PDIICLQETKTEDKNFPF 47 V V T+NV N S + R + +I ++ P +CLQE + Sbjct: 15 VRVVTFNVRYAAPRPMPNEKSWQVRCPKICTQLDFITRGHDSP-FLCLQEV-LYPQLLDI 72 Query: 48 ETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT---- 103 + + G+ + + LS + + Sbjct: 73 QAGLGEGWGYVGIGRDDGDRLGELSPVFYRVGTWKCEVFKNYWLSETPDRPSKGWDAALP 132 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 + + +G +++ + + P Sbjct: 133 RIVTVGEFVHKRTGQRAVVMSTHFDHLGVVAREQSAKLILRIAAQWAEERASSPPAAVIL 192 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223 + + + + Y+ +D + +RI Sbjct: 193 GGDFNSNPSDNAYKSMVAKGSGMADAHALVPSEKRYGNELTYTSFD-----EPDQQAVRI 247 Query: 224 DHIMLSPEATSLLHSARIDTKPRG-WTKPSDHTPVIVSLDIPEPRK 268 D I + + + + + T SDH PV+ L++ + Sbjct: 248 DFIFVKVPSNVKVTTFGVLTNRFDDGVFLSDHRPVVADLEVRAAKD 293 >gi|154272351|ref|XP_001537028.1| predicted protein [Ajellomyces capsulatus NAm1] gi|150409015|gb|EDN04471.1| predicted protein [Ajellomyces capsulatus NAm1] Length = 1753 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 37/278 (13%), Positives = 76/278 (27%), Gaps = 44/278 (15%) Query: 4 VTVATWNVNSIRARIHNLAAWIKE---NNPDIICLQETKTEDKNFP-FETLQSLNYHIET 59 + + +NV ++R LA+ + + DI+ +QE P +YH Sbjct: 486 LRILQYNV--WKSRDVVLASLFQNRKILDYDILAIQE--------PWRNPFIETSYHPLK 535 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 + ++ PG I+ + + L G + Sbjct: 536 AQFQLTYLANAATRVCLYISKRINPGTWSVSY---------ISKDIISLQILNPHSGRKV 586 Query: 120 TSTK-YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + Y++ + + A + L E +I GD+N+ + Sbjct: 587 SVFNVYNEVGTDTLSTMAEAIRALNSPEDIIVLGDFNLHHPLWSSTHRHGGRG-----PS 641 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 + ++ TH K+ ID S + + Sbjct: 642 AQGLLTVIEEFQLQLLTEPGTPTH------------RWKDGESTIDLTFASEDLADRVTH 689 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQ 276 ++D + SDH P+ + D Sbjct: 690 CKVDREV---DCDSDHLPIALVFDWNWQPVNPTRKRLW 724 >gi|119386766|ref|YP_917821.1| endonuclease/exonuclease/phosphatase [Paracoccus denitrificans PD1222] gi|119377361|gb|ABL72125.1| Endonuclease/exonuclease/phosphatase [Paracoccus denitrificans PD1222] Length = 260 Score = 50.2 bits (118), Expect = 3e-04, Method: Composition-based stats. Identities = 28/274 (10%), Positives = 57/274 (20%), Gaps = 54/274 (19%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQETK----TEDKNFPFETLQSLN 54 + +A++N++ R I E D+I LQE + P ++ Sbjct: 8 LRLASYNLHKCRGMTGPHAPERNLRVIAELGADVIALQEVDFRFGARPEALPRALIEK-- 65 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 + + + G E + L + + Sbjct: 66 -------------TTGMVPAPFLGTGENSLGWHGQTILLRPELRGKAEIRRLPLPGIEPR 112 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 + + +L I A I +D+ Sbjct: 113 GALVLRLPGITVVAVHLGLMRSSRRAQLSR----IIAQARRIGHDRMALTGDFNEWHDSR 168 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 + + +R D +S Sbjct: 169 GLEALEALRVVTPGPSWPAPFPR-----------------------LRYDRFAVSRSIE- 204 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268 + + SDH PV L + + Sbjct: 205 -VLDCGVLDNEMARA-ASDHLPVWADLAVDAHEE 236 >gi|164448715|ref|NP_001068851.2| sphingomyelin phosphodiesterase 2, neutral [Bos taurus] gi|296484135|gb|DAA26250.1| sphingomyelin phosphodiesterase 2, neutral [Bos taurus] Length = 423 Score = 50.2 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 45/301 (14%), Positives = 85/301 (28%), Gaps = 45/301 (14%) Query: 4 VTVATWNVNSI------RA-RIHNLAAWIKENNPDIICLQETKTEDK--NFPFETLQSLN 54 + V N I RA R+ L ++ + D+ L+E +E + L + Sbjct: 9 LRVFNLNCWGIPYLSKHRADRVKRLGDFLNMESFDLALLEEVWSEQDFQYLRQKLLPTYP 68 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN---- 110 +G+ + SK+ E H+ + F L + + Sbjct: 69 AAHYFRSGIIGSGLCVFSKHPIQEFTQHVFTLNGYPYMIHHCDWFCGKAVGLLVLHLSGL 128 Query: 111 -------LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 N T +++ +F + + ++ GD N+ P+ C Sbjct: 129 VLNAYVTHLHAEYNRQKDTYLAHRVAQAWELAQFIHHTSKKADVVLLCGDLNLHPKDLGC 188 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223 W LE R F+ + L + GIRI Sbjct: 189 RLLKEWTGLHDAYLETRD-FKGSEEGCTMVPKNCYVKHQEL--------GPFP--LGIRI 237 Query: 224 DHIMLSPEATSLLHSARID---------TKPRGWTKPSDHTPVIVSLDIPEPRKKQQDST 274 D++ + I P SDH ++ +L + + S Sbjct: 238 DYV-----LYKAVSGLYIFCKTFKTTTGHDPYSGPPFSDHEALMATLCVRHSPPQHNPSP 292 Query: 275 S 275 + Sbjct: 293 T 293 >gi|170760014|ref|YP_001787009.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum A3 str. Loch Maree] gi|169407003|gb|ACA55414.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum A3 str. Loch Maree] Length = 263 Score = 50.2 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 41/268 (15%), Positives = 81/268 (30%), Gaps = 13/268 (4%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYHI 57 + + T N +S + +I LA I ENN D+I LQE ++ + F+ ++ N+ Sbjct: 1 MKILTLNCHSWQEEKQLEKIKYLAKVIYENNYDVIALQEVSQSINSKILFDNIKEDNFAF 60 Query: 58 E-TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFI-EATFTINTQTLRIGNLYLPH 115 + + I + L + + + + + N + Sbjct: 61 ILIKELEKLGENRFKILWDFAHIGYDKYEEGLAILTKHSVKEKDSFYISKSKDKNFWKAR 120 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 Y +K + E + + Q C + NDA Sbjct: 121 KIIKCKIFYKNKPILVYSCHLGWWDDKEEDFKFQANKLIEDLKQDETCILMGDFNNDAFL 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 + + L N F D + + K +R+D I+ + Sbjct: 181 ---NYRGYDYLINKNFKDIYHLAKSKDNGVTVIGDIDGWKENTKNMRLDLILSNKNL--K 235 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + ++ SDH V ++I Sbjct: 236 VEYCKVIFNGIRKEIISDHFGVEAKIEI 263 >gi|170033629|ref|XP_001844679.1| sphingomyelin phosphodiesterase 2 [Culex quinquefasciatus] gi|167874647|gb|EDS38030.1| sphingomyelin phosphodiesterase 2 [Culex quinquefasciatus] Length = 423 Score = 50.2 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 47/287 (16%), Positives = 81/287 (28%), Gaps = 38/287 (13%) Query: 1 MSV-VTVATWNVNSI------RA-RIHNLAAWIKENNPDIICLQETKTEDK--NFPFETL 50 M++ +++ T N+ I RA R+ + + N DI+ LQE +E Sbjct: 1 MALELSILTLNIWGIPYVSKDRAVRVEAIGEVLASGNYDIVSLQEVWSESDYRYLKERAA 60 Query: 51 QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL---- 106 +L + +G+A+LSKY + H + V F Sbjct: 61 AALPFAHYFYSGVVGSGLAVLSKYPIVSAFFHAWSVNGYVHRIQHGDWFGGKGVGFVKIS 120 Query: 107 -------RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159 + ++ +F + AGD N P Sbjct: 121 VNEQLVHVYAAHLHAEYDRSCDDYMAHRVIQAYDTAQFIENTQGNGVLQVLAGDLNTEPG 180 Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK 219 + T + ++ + R ++ + K Sbjct: 181 DLAYRVLQTC---SRLTDSADKKMYASGDLNTNEIARNSYTDPEA---------AKKSPK 228 Query: 220 GIRIDHIM--LSPEATSLLHSARI---DTKPRGWTKPSDHTPVIVSL 261 G RID+IM L R+ D P SDH V + Sbjct: 229 GKRIDYIMYRFGSHYEGKLLEHRLPLPDRIPGKDISYSDHEAVYAKI 275 >gi|91224719|ref|ZP_01259980.1| hypothetical protein V12G01_08258 [Vibrio alginolyticus 12G01] gi|91190607|gb|EAS76875.1| hypothetical protein V12G01_08258 [Vibrio alginolyticus 12G01] Length = 287 Score = 50.2 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 30/277 (10%), Positives = 80/277 (28%), Gaps = 28/277 (10%) Query: 2 SVVTVATWNV-----NSIR-ARIHN----LAAWIKENNPDIICLQET-KTEDKNFPFETL 50 + + + +WN+ + + +R L ++ + DI+ QE + Sbjct: 20 NSINLTSWNIEWLSIDGGKVSRTPQDFEKLTHYVDKTQADILAFQEVERAAAIQ------ 73 Query: 51 QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 +++ N ++ T + + + T LR + Sbjct: 74 KAVGNDFTIYLSDRSNASNRHLQFNDTNQYTGFAVRNGVSVLDKPDFSITRGNSKLRFAS 133 Query: 111 LYLPHGNPITSTKY--DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168 + + N T + R +++ + + + + ++ Sbjct: 134 YLVLNPNQENETHLLSVHLKAGCSGAYRNNRDCKIVKQQGQALAKWIKAREDNKQHYVVL 193 Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 + + + + + + + + + IDHI+ Sbjct: 194 GDFNHNLGYQGDWLWDVISDNTSAKLVTKDTKAECKVR--SNRNPNKTHQFRSVIDHIIA 251 Query: 229 SPEATSLLHSARIDTKPRGWT----KPSDHTPVIVSL 261 S + + S+ + T + K SDH PV +L Sbjct: 252 SGDLKA---SSGVQTVFKTQDVLDYKLSDHCPVSTTL 285 >gi|326915191|ref|XP_003203903.1| PREDICTED: LOW QUALITY PROTEIN: protein angel homolog 2-like [Meleagris gallopavo] Length = 553 Score = 50.2 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 18/108 (16%), Positives = 35/108 (32%), Gaps = 5/108 (4%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73 R N+ IK+ + D++CLQE ++ ++ E L+SL YH E + Sbjct: 207 RFPNILQEIKQLDADVLCLQEV--QEDHYRKEIKSSLESLGYHCEYKMRTGSKPDGCAIC 264 Query: 74 YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 ++ + + L + + N Sbjct: 265 FKTSKFRLISSNPVEFFRRDIPLLDRDNVGLVLLLQPKFPCKTNAAIC 312 >gi|6678031|ref|NP_033239.1| sphingomyelin phosphodiesterase 2 [Mus musculus] gi|20138887|sp|O70572|NSMA_MOUSE RecName: Full=Sphingomyelin phosphodiesterase 2; AltName: Full=Lyso-platelet-activating factor-phospholipase C; Short=Lyso-PAF-PLC; AltName: Full=Neutral sphingomyelinase; Short=N-SMase; Short=nSMase gi|3021480|emb|CAA10994.1| neutral Sphingomyelinase [Mus musculus] gi|15012139|gb|AAH10978.1| Sphingomyelin phosphodiesterase 2, neutral [Mus musculus] gi|148673028|gb|EDL04975.1| sphingomyelin phosphodiesterase 2, neutral, isoform CRA_b [Mus musculus] Length = 419 Score = 50.2 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 42/281 (14%), Positives = 87/281 (30%), Gaps = 33/281 (11%) Query: 15 RA-RIHNLAAWIKENNPDIICLQETKT-EDKNFPFETLQSLNYHIETCGQKSY--NGVAI 70 RA R+ L ++ N D+ L+E + +D + + L SL Y + +G+ + Sbjct: 26 RADRMKRLGDFLNLENFDLALLEEVWSEQDFQYLRQRL-SLTYPDAHYFRSGMIGSGLCV 84 Query: 71 LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI-----------GNLYLPHGNPI 119 SK+ EI H+ + F + L + + Sbjct: 85 FSKHPIQEIFQHVYSLNGYPYMFHHGDWFCGKSVGLLVLRLSGLVLNAYVTHLHAEYSRQ 144 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + +++ +F + + ++ GD N+ P+ C W +E Sbjct: 145 KDIYFAHRVAQAWELAQFIHHTSKNADVVLLCGDLNMHPKDLGCCLLKEWTGLHDAFVET 204 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 F+ + L + GIRID+++ + Sbjct: 205 ED-FKGSDDGCTMVPKNCYVSQQDL--------GPFP--SGIRIDYVLY-KAVSEFHVCC 252 Query: 240 RIDT-----KPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTS 275 P SDH ++ +L + ++ T+ Sbjct: 253 ETLKTTTGCDPHSDKPFSDHEALMATLYVKHSPPQEDPCTA 293 >gi|325838966|ref|ZP_08166749.1| endonuclease/exonuclease/phosphatase family protein [Turicibacter sp. HGF1] gi|325490621|gb|EGC92933.1| endonuclease/exonuclease/phosphatase family protein [Turicibacter sp. HGF1] Length = 254 Score = 50.2 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 35/265 (13%), Positives = 76/265 (28%), Gaps = 29/265 (10%) Query: 4 VTVATWNV-----NSIRARIHNLAAW---IKENNPDIICLQETKTEDKNFPFETLQSLNY 55 + + T+N+ + + + ++ IK PD+I QE + + Q +Y Sbjct: 5 LKIVTFNLRITVDDGLNVWENRVSHVVHKIKSEAPDLIGFQE--LTEISLRDLKRQLTDY 62 Query: 56 -HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 + + +G ++ Y ++ + + R N+ + Sbjct: 63 VFVGCGRDEQMSGEMVMIAYNKNKLDLMSLDIFWFSDTPYKPGSKKEMMTLARPCNVAVF 122 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 + ++ D ++ Q I+ + ++ Sbjct: 123 KNQLTNQIFRVYNT-----HYDHMQSSIRVQSSEQLLNDLHLREQNISLPTLIMGDMNSE 177 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E ++ + + D Y+F DY K ID+I + Sbjct: 178 PQDEEIKAIVNNEIIELNDLTDKLD-----YTFHDY-GKIKIK-----IDYIFATKSV-- 224 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIV 259 A SDH PV+V Sbjct: 225 NASKAVAWADCFDGVYLSDHYPVMV 249 >gi|313207216|ref|YP_004046393.1| endonuclease/exonuclease/phosphatase [Riemerella anatipestifer DSM 15868] gi|312446532|gb|ADQ82887.1| Endonuclease/exonuclease/phosphatase [Riemerella anatipestifer DSM 15868] gi|315022982|gb|EFT36003.1| endonuclease/exonuclease/phosphatase [Riemerella anatipestifer RA-YM] gi|325335338|gb|ADZ11612.1| Metal-dependent hydrolase [Riemerella anatipestifer RA-GD] Length = 286 Score = 50.2 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 37/269 (13%), Positives = 86/269 (31%), Gaps = 28/269 (10%) Query: 4 VTVATWNV------NSIRARIHNLAA---WIKENNPDIICLQETKTEDKNFPFETLQSLN 54 + + T+N+ + + + + ++ PDII QE ++ +T+ + Sbjct: 25 LKLMTFNIRYDNPDDGLNVWRNRILNTKNLLEFYIPDIIGFQEV-LPNQYLDLKTILP-S 82 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 Y+ + G+ S N + L + + + RI + + Sbjct: 83 YNSYSLGRDSENQGEACPLFFNKNRFELLDSGTFWLSPTPNKISKAWGANLNRICSWVML 142 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 N ST + + L L + I + Y ++ + + Sbjct: 143 KDNISKSTLKIYNLHFDHESELSRKNSLALIQEYINKDR------EQNIYTLVMGDFNTT 196 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI--RIDHIMLSPEA 232 F+ + + + T + + ++ K G RID+I + + Sbjct: 197 FSNQELLQQVLPPLAEASTLAKKTLLNNGTF-------QAFGKKVGQSPRIDYIFVPKD- 248 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + + +I + P DH PV+ + Sbjct: 249 -TEVLQYQILSNQFYGQYPYDHFPVLTEI 276 >gi|262037299|ref|ZP_06010773.1| metal-dependent hydrolase [Leptotrichia goodfellowii F0264] gi|261748682|gb|EEY36047.1| metal-dependent hydrolase [Leptotrichia goodfellowii F0264] Length = 263 Score = 50.2 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 41/271 (15%), Positives = 83/271 (30%), Gaps = 19/271 (7%) Query: 4 VTVATWNVNSIRARIHN--------LAAWIKENNPDIICLQET-KTEDKNFPFETLQSLN 54 + + T NV+ A I LA I EN+ D+I +QE ++ + F ++ N Sbjct: 1 MKLLTINVH---AWIEENQDEKMEILAKVIAENDYDVIAMQEVNQSMNSLVLFRAIRQDN 57 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 Y + S + + + D+ + R ++ Sbjct: 58 YGWVLLDKISKYTDRTYYYHWSNSHIGYDKYDEGLAIITKHKLLDVDEFYCTRAQSVNTI 117 Query: 115 HGNPITSTKYDD--KISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 I S + +I E + + + D Sbjct: 118 TSRRINSATIEYKGQIMEFYTCHMNLPTNKEEKMSDNIQRILKRSQTDNLKILMGDFNTD 177 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 A + E ++ + + G D A + + + RID+I + + Sbjct: 178 AINSPED---YKMILSQGLYDTYTAAIEKDSGITVGGNIDGWSKNKEDKRIDYIFSNKKI 234 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + S+++ + SDH + V LD+ Sbjct: 235 --KVLSSKVIFNGKNHPVVSDHYGLEVILDM 263 >gi|260365700|ref|ZP_05778214.1| metal-dependent hydrolase [Vibrio parahaemolyticus K5030] gi|260896112|ref|ZP_05904608.1| metal-dependent hydrolase [Vibrio parahaemolyticus Peru-466] gi|308094717|ref|ZP_05891469.2| metal-dependent hydrolase [Vibrio parahaemolyticus AN-5034] gi|308126490|ref|ZP_05910491.2| metal-dependent hydrolase [Vibrio parahaemolyticus AQ4037] gi|308088090|gb|EFO37785.1| metal-dependent hydrolase [Vibrio parahaemolyticus Peru-466] gi|308090251|gb|EFO39946.1| metal-dependent hydrolase [Vibrio parahaemolyticus AN-5034] gi|308109923|gb|EFO47463.1| metal-dependent hydrolase [Vibrio parahaemolyticus AQ4037] gi|308111792|gb|EFO49332.1| metal-dependent hydrolase [Vibrio parahaemolyticus K5030] Length = 288 Score = 50.2 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 41/279 (14%), Positives = 76/279 (27%), Gaps = 28/279 (10%) Query: 2 SVVTVATWNV-----NSIRARIH-----NLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51 + + + +WN+ N + L ++ + DII QE D + Sbjct: 20 NSINLTSWNIEWLSINGGKVSRTSDDFVKLNQYVDKTQADIIAFQEV---DSKAAVQKAV 76 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 Y I + N ++ T + + + T LR + Sbjct: 77 GDGYAIYLSDRAQSNN--KHLQFSDTNQYTGFAVRKDIEVSDPADFSITRGNSKLRFASY 134 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 + + + + + R + + Sbjct: 135 IVVNPSQKDELHLLSVHLKAGCSGAYKNSRDCQTLSQQGEALAKWMSEREKKKEQYAVMG 194 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 D L ++ + DA T DT S + IDHI++SP+ Sbjct: 195 DFNHNLSYQRDWLWAIMTLGNDAQLVTRDTQADCKVRSNKNPSKTHQFRSLIDHIIVSPQ 254 Query: 232 ATSL------LHSARIDTKPRGWTKPSDHTPV--IVSLD 262 + S + K SDH PV V+L+ Sbjct: 255 IKAKNAHQTLFSSQDVLDY-----KLSDHCPVNATVTLN 288 >gi|321466080|gb|EFX77077.1| hypothetical protein DAPPUDRAFT_305861 [Daphnia pulex] Length = 358 Score = 50.2 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 36/277 (12%), Positives = 70/277 (25%), Gaps = 49/277 (17%) Query: 5 TVATWNVNSI-----RARIHNLAAWIKENNPDIICLQET--KTED---KNFPFETLQSLN 54 + +WN++ + + R ++ I+ +NPD++ LQE KT D N P Sbjct: 110 RMISWNIDGLDDRNLKMRTKSVVKIIQTHNPDVVFLQEVIPKTLDYLENNLPQFKF---- 165 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT----LRIGN 110 + +G ++ I + L++ N Sbjct: 166 ------IPGNVDGYFTVTMLNMFTIHYDSHEIIDFPATTMGRNLLKVEAHMGPLKLKLLN 219 Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170 ++ + + R + + D + Sbjct: 220 THMESTGEHADERMNQLNISFHELSRTDKSVNVIMGGDLNMRDKELATVGGLPDLTYDLW 279 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML-- 228 E + ++ +N + R D I L Sbjct: 280 EACGSRKECQWTWDITRNTNKDFPGKFKPRC--------------------RFDRIYLRP 319 Query: 229 --SPEATSLLHSARIDTKPRGWT-KPSDHTPVIVSLD 262 S A K G+ PSDH ++ D Sbjct: 320 ATSTSAVPKFFGLIGLQKISGYQCFPSDHWGLLADFD 356 >gi|270015323|gb|EFA11771.1| hypothetical protein TcasGA2_TC004098 [Tribolium castaneum] Length = 1336 Score = 50.2 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 11/34 (32%), Positives = 17/34 (50%) Query: 9 WNVNSIRARIHNLAAWIKENNPDIICLQETKTED 42 WN N +RA L ++ DI+ + ETK + Sbjct: 493 WNANGLRAARDELEEFVDRLQLDIVLVCETKLQP 526 >gi|154269638|ref|XP_001535769.1| hypothetical protein HCAG_09311 [Ajellomyces capsulatus NAm1] gi|150411145|gb|EDN06533.1| predicted protein [Ajellomyces capsulatus NAm1] Length = 266 Score = 50.2 bits (118), Expect = 4e-04, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 28/75 (37%), Gaps = 8/75 (10%) Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 + W G ID LSP L I + K SDH P+ +L++ Sbjct: 84 TTWQDRGSP-----GTTIDLTFLSPLLHDKLRRCAIAEEA---CKGSDHKPIETTLELTP 135 Query: 266 PRKKQQDSTSQNMKP 280 K+ + +N +P Sbjct: 136 IPKEAERRNWKNAEP 150 >gi|73951376|ref|XP_851047.1| PREDICTED: similar to LINE-1 reverse transcriptase homolog [Canis familiaris] Length = 1402 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 40/110 (36%), Gaps = 12/110 (10%) Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 + E R L M FTD R H Y+F+ ++S RIDHI+ Sbjct: 285 KQNISKETRALNDTLDQMDFTDIYRTLHPNSTEYTFFSSAHGTFS-----RIDHILGHKS 339 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 + I SDH + + L+ +K + S + ++ I Sbjct: 340 GLNRYQKIGIVPCI-----FSDHNALKLELN--HNKKFGRTSNTWRLRTI 382 >gi|302346017|ref|YP_003814370.1| endonuclease/exonuclease/phosphatase family protein [Prevotella melaninogenica ATCC 25845] gi|302149189|gb|ADK95451.1| endonuclease/exonuclease/phosphatase family protein [Prevotella melaninogenica ATCC 25845] Length = 355 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 41/268 (15%), Positives = 82/268 (30%), Gaps = 22/268 (8%) Query: 4 VTVATWNVNSIRA-----RIHN-LAAWIKENNPDIICLQETKTE--DKNFPFETLQSLNY 55 + V ++NV + N + +I ++ DI+CLQE + DK+ + TL+ Sbjct: 90 IKVLSYNVFMFSSWSEPDAKKNPIVDYIVKSKADIVCLQEAQATLDDKDHIYSTLKKHYP 149 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + + +K+ ++ + + T TL + N + + Sbjct: 150 YFKLMIKKAPGADYMVLLSKYPVLWQDTIPYGSSSNQSVAYMLDIKGTNTLVVNNHFESN 209 Query: 116 G-NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 G + + + + Q + L L + + Sbjct: 210 GLSSGDKEGFKTLVKGELKTGEAKRQSVHLITKLGDVSARRAPQAETVARYVKKYLDKKV 269 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK-GI--RIDHIMLSPE 231 + + + +D S +K G+ RIDHI S + Sbjct: 270 PVILCGDFNDSPLSYTHRTIAKELNDCFVE----SGNGPGISYHKSGMYFRIDHIFCSDD 325 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIV 259 S A++D SDH P+ Sbjct: 326 FDSY--GAKVDNSVTT----SDHYPIYC 347 >gi|290991312|ref|XP_002678279.1| endonuclease/exonuclease/phosphatase family protein [Naegleria gruberi] gi|284091891|gb|EFC45535.1| endonuclease/exonuclease/phosphatase family protein [Naegleria gruberi] Length = 378 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 41/297 (13%), Positives = 74/297 (24%), Gaps = 43/297 (14%) Query: 5 TVATWNV------NSIRARIHNLAAWIK-----ENNPDIICLQE---TKTEDKNF--PFE 48 T+N+ N + + L ++ DII L E +K P Sbjct: 81 KCCTYNIHVFKSGNG-QTTLDKLIDYLTVGQIGSKPFDIIGLNEAFESKYRRGQILTPLN 139 Query: 49 TLQ---------SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF 99 +Q + + N + + G ++ Sbjct: 140 EIQKSLTKYYGTEYKCYYAPTCKTMGNCFITALPVKKTQTWRLAKGPGGVRNVLGLQLDL 199 Query: 100 TINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159 + L + + GD+N + + Sbjct: 200 EKCKSPVEYFFLTHLDFINEEWRVKQFSQILEFMEKFMRQSFNTKDNNFVMMGDFNAMYK 259 Query: 160 P------HDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY-SF----- 207 D + + I+ LY ++ Sbjct: 260 NDYTQEFWDQIQMDRMQEQWEPAVSTLMDILLGDIKDERLPIQKNLKCEKLYDTWRMCNK 319 Query: 208 ---WDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 ++ S S+ K RID+I+ S + + + IDTK T SDH PVI Sbjct: 320 ELQFNGRNLSSSRLK-TRIDYILCSKSLSKNVLHSCIDTKS-KTTSISDHNPVITHF 374 >gi|153839235|ref|ZP_01991902.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus AQ3810] gi|149747230|gb|EDM58218.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus AQ3810] Length = 434 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 41/283 (14%), Positives = 81/283 (28%), Gaps = 43/283 (15%) Query: 4 VTVATWNVNSIRA-------RIHNLAAWIKENNPDIICLQETKTE-DKNFPFETLQSLNY 55 + + T+N+ ++ A R + ++K D++ LQE F E + Y Sbjct: 170 LKLMTYNIWALPAIASHIGDRYELIPDYVK--GYDVLALQEVFASGRDAFLRELAKDYPY 227 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + + +N + + + I H Sbjct: 228 QTKMLDKDDFNVYDGGVVIVSRYPIVNEAQYVFPDCSGTDCFADKGVNYAEIIKGGQAYH 287 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + +D + R +F R A NI Y+ N Sbjct: 288 VFATHTASFDTDTAREYRQRQFQQMR-------TMAQSLNIPNNETVVYSGDFNVNK--- 337 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYS--FWDYYADSWS-------KNKGIRIDHI 226 + A + Y+ +D ++++ +N +D++ Sbjct: 338 ------LKFPGDYQQMIANLSAMEPQYSGYTASTFDPRINNFAGEALSGGENVEY-LDYV 390 Query: 227 MLSPEA-TSLLHSARID---TKPRGWTKP---SDHTPVIVSLD 262 M+S E + R+D + G K SDH PV + Sbjct: 391 MVSNEYGVKSFNDNRVDVPRSTAEGLWKHYNLSDHFPVSAVIK 433 >gi|28900797|ref|NP_800452.1| hypothetical protein VPA0942 [Vibrio parahaemolyticus RIMD 2210633] gi|28809243|dbj|BAC62285.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633] Length = 293 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 41/279 (14%), Positives = 76/279 (27%), Gaps = 28/279 (10%) Query: 2 SVVTVATWNV-----NSIRARIH-----NLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51 + + + +WN+ N + L ++ + DII QE D + Sbjct: 25 NSINLTSWNIEWLSINGGKVSRTSDDFVKLNQYVDKTQADIIAFQEV---DSKAAVQKAV 81 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 Y I + N ++ T + + + T LR + Sbjct: 82 GDGYAIYLSDRAQSNN--KHLQFSDTNQYTGFAVRKDIEVSDPADFSITRGNSKLRFASY 139 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 + + + + + R + + Sbjct: 140 IVVNPSQKDELHLLSVHLKAGCSGAYKNSRDCQTLSQQGEALAKWMSEREKKKEQYAVMG 199 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 D L ++ + DA T DT S + IDHI++SP+ Sbjct: 200 DFNHNLSYQRDWLWAIMTLGNDAQLVTRDTQADCKVRSNKNPSKTHQFRSLIDHIIVSPQ 259 Query: 232 ATSL------LHSARIDTKPRGWTKPSDHTPV--IVSLD 262 + S + K SDH PV V+L+ Sbjct: 260 IKAKNAHQTLFSSQDVLDY-----KLSDHCPVNATVTLN 293 >gi|115360332|ref|YP_777469.1| endonuclease/exonuclease/phosphatase [Burkholderia ambifaria AMMD] gi|115285660|gb|ABI91135.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria AMMD] Length = 269 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 28/263 (10%), Positives = 62/263 (23%), Gaps = 49/263 (18%) Query: 4 VTVATWNVNS------IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57 + +AT+N+ RA H +A I E + D+I LQE L Sbjct: 29 LRIATYNIRGGYGKWHTRAA-HRIAQVIHELDADVIALQEV-------------PLG--- 71 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 + + G L + Sbjct: 72 ------------GTHAPDVLAHLRDATGMHAVAGPTIDTPERRYGNAVLSRCPIRAARTL 119 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 ++ + + + + A + L + Sbjct: 120 DLSFHQREPRGALDADIDSSAGMIRVVATHLGLSASERSAQVQRLLAAFDTGAMPVILMG 179 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLY-SFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 ++ + F + + + + + + ++ I + P L Sbjct: 180 DINEWFVRGRALRALVTRFRRAPAPRTFPTLYPVFSLDR----------IWIHPG--EWL 227 Query: 237 HSARIDTKPRGWTKPSDHTPVIV 259 + R + SDH P++ Sbjct: 228 VDVNVHRSMRAR-RASDHYPLVA 249 >gi|327539872|gb|EGF26475.1| endonuclease/exonuclease/phosphatase family protein [Rhodopirellula baltica WH47] Length = 286 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 37/266 (13%), Positives = 74/266 (27%), Gaps = 43/266 (16%) Query: 5 TVATWNV-----NSIRARIHNLAAWIKENNPDIICLQET--KTEDKNFPFETLQSLNYHI 57 V ++N+ N + + A I + PD + LQE + + Q L H+ Sbjct: 54 RVLSYNIKRGYGNDGKTDLPRTAEVISKLKPDFVGLQEVDERCNRSG-KVDQAQWLGEHL 112 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 + + +Y + + V+ + + + Sbjct: 113 DMHAAFAPFMDYDGGRYGMAILSRYPIEKTESVELARGREPRVALAAHVTLPDGNKLTLV 172 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + D ++ + L P I GD+N P+ Sbjct: 173 NVHFDYIRDDTVRFEQATKVREFIQSLSNPAILLGDFNDTPE------------------ 214 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 + + + A ++F ID + SPE + Sbjct: 215 ------SRTVQLFQDGFVEADKPADDSFTF-SAEKPDRE------IDFLFASPETQWTVK 261 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263 + + +P SDH PV+ L + Sbjct: 262 TVDVIDEPL----ASDHRPVMAVLQL 283 >gi|71026795|ref|XP_763041.1| hypothetical protein [Theileria parva strain Muguga] gi|68349994|gb|EAN30758.1| hypothetical protein TP03_0022 [Theileria parva] Length = 479 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 20/144 (13%), Positives = 43/144 (29%), Gaps = 12/144 (8%) Query: 5 TVATWNVNSI------RARIHNLAAWIKENNPDIICLQETKTEDKNF----PFETLQSLN 54 T+ TWNV + + + +K+++PDI+ LQ+ K P + ++ Sbjct: 293 TILTWNVCGLALSKSKKNIWESFIQIVKQHDPDIVVLQDVKLCSSEILGKQPKLSARTYG 352 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGD--DLDVQARFIEATFTINTQTLRIGNLY 112 H+ + +++ + + A FTI L + Sbjct: 353 GHVAPSYAQEVQDADLVNDLKRTTFKKYYCVFSLSAWRIAGRKMHHFTIQQLLLNLTVSS 412 Query: 113 LPHGNPITSTKYDDKISWIKRFLR 136 H + + Sbjct: 413 FKHFSNYLQHISNYLQCNTNAPQD 436 >gi|78776910|ref|YP_393225.1| endonuclease/exonuclease/phosphatase [Sulfurimonas denitrificans DSM 1251] gi|78497450|gb|ABB43990.1| Endonuclease/exonuclease/phosphatase [Sulfurimonas denitrificans DSM 1251] Length = 334 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 47/328 (14%), Positives = 86/328 (26%), Gaps = 76/328 (23%) Query: 2 SVVTVATWNV------------------NS----------IRARIHNLAAWIKENNPDII 33 +++ +AT+NV NS I+ + N+A IK+ + DII Sbjct: 18 TILKIATYNVENLFDLETSGYEYSEYIPNSTSEWNQKNYKIK--LKNIAQVIKDIDADII 75 Query: 34 CLQETKTEDKNFPFETL-----QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDL 88 L+E ++ Y+ + + VA+LSK + + Sbjct: 76 ALEEVESLQALLDLRFALKQSGLYYGYYSIADKKNTTVKVALLSKVPFVY-SKEISVTQT 134 Query: 89 DVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRL------ 142 +E F IN + L I + + S + S +KR + Sbjct: 135 YEYRNILETKFNINGKELYIFVNHWKSKSGAESQRVLCAKSLMKRVKEIGFDKNIILLGD 194 Query: 143 ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH 202 + + I Q F + D Sbjct: 195 FNSDYEEYLKFAKKREHNDTDGITGINHILGTINQRNSALHVNYQKESFYNLW-YDTDED 253 Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKP----------------- 245 YS+ Y +D+I++S + + I Sbjct: 254 KRYSY-LYRGKKEV------LDNILISQSLLNAKDVSYIHNTISNFNKEYLFKKNNIYRW 306 Query: 246 ---------RGWTKPSDHTPVIVSLDIP 264 SDH P++ + Sbjct: 307 QISKARVKKHKGQGYSDHLPLVARFRVD 334 >gi|16125115|ref|NP_419679.1| hypothetical protein CC_0862 [Caulobacter crescentus CB15] gi|221233842|ref|YP_002516278.1| hypothetical protein CCNA_00905 [Caulobacter crescentus NA1000] gi|13422121|gb|AAK22847.1| conserved hypothetical protein [Caulobacter crescentus CB15] gi|220963014|gb|ACL94370.1| hypothetical protein CCNA_00905 [Caulobacter crescentus NA1000] Length = 305 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 41/290 (14%), Positives = 80/290 (27%), Gaps = 44/290 (15%) Query: 6 VATWNV---N-----SIRARIHNLAAWIKENNPDIICLQE-TKTEDKNFPFETLQSLNYH 56 V ++N+ N R R + I+ PDI+ LQE + +Y Sbjct: 45 VMSYNIRYDNPDDRPDWRTRRGPMVEQIRFFAPDILGLQEALPAMVDQLAGDLAGYAHYG 104 Query: 57 IETCGQKSYNGVAILSK----YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 + + +Q + T+ D ++ +A L + + Sbjct: 105 VGRDDGARLGETTTIFYRAERFQRVLARTYWCSPTPDTPSKAYDAALPRTFTRLVLKDRI 164 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRL--ELEEPLIFAGDYNIIPQPHDCYNPIIWE 170 + + D + + L + LI GD+N P+ E Sbjct: 165 TGVTFDVRNAHLDHVGAESRAKCAAQILALAPWPKARLITLGDFNSAPEEAPYRLLTAPE 224 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230 + + + T + ++ + G ID+I + Sbjct: 225 G-----------PYRDARAAASSVFSPSTGTFNRFT---------PASIGPPIDYIFVDR 264 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 + + T SDH PV+ + + T KP Sbjct: 265 RL--NVARFAVPTDVADAGVISDHFPVLAEITL-------SPKTRAKAKP 305 >gi|291515225|emb|CBK64435.1| Metal-dependent hydrolase [Alistipes shahii WAL 8301] Length = 292 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 42/277 (15%), Positives = 73/277 (26%), Gaps = 42/277 (15%) Query: 7 ATWNV----------NSIRARIHNLAAWIKENNPDIICLQE--------TKTEDKNFPFE 48 ++N+ N AR I+ +PD+I QE K N P Sbjct: 38 MSFNIRYYKPGADGDNGWVARRAACLEMIRAESPDVIGFQEPHRPQIDYLKV---NLPEY 94 Query: 49 TLQSLNYHIETCGQKSYN--GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 + T +K + ++ + I+ + + + + Sbjct: 95 AEVDMGRDAATDIEKKPDGGEHLMIMYRRSKYILLDSGFFWISPTPECPSRGWDAMCRRV 154 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 + +D I + R S R+ + AG+ + D Sbjct: 155 TVWVQLKDRKTGKEFFYFDTHFDHIGKQARAESARMMVARMKRIAGEKAAVFLSGDLNTT 214 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226 A TD + +D S W ID I Sbjct: 215 YDN---ALLDPLKAWMQSARHAAPVTDELPTFNDFGKR-SLW--------------IDFI 256 Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 A +L + +D+ G SDH PV + Sbjct: 257 FA-RNARALAYRTLVDSGRYGVPFLSDHNPVYALYKL 292 >gi|74007490|ref|XP_848434.1| PREDICTED: similar to LINE-1 reverse transcriptase homolog [Canis familiaris] Length = 1377 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 40/110 (36%), Gaps = 12/110 (10%) Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 + E R L M FTD R H Y+F+ ++S RIDHI+ Sbjct: 260 KQNISKETRALNDTLDQMDFTDIYRTLHPNSTEYTFFSSAHGTFS-----RIDHILGHKS 314 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 + I SDH + + L+ +K + S + ++ I Sbjct: 315 GLNRYQKIGIVPCI-----FSDHNALKLELN--HNKKFGRTSNTWRLRTI 357 >gi|317125945|ref|YP_004100057.1| endonuclease/exonuclease/phosphatase [Intrasporangium calvum DSM 43043] gi|315590033|gb|ADU49330.1| Endonuclease/exonuclease/phosphatase [Intrasporangium calvum DSM 43043] Length = 255 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 39/272 (14%), Positives = 73/272 (26%), Gaps = 33/272 (12%) Query: 4 VTVATWNV-NSIRARIH--------NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 + VAT+N+ N R+ LA +K + DI+ LQE D+N L Sbjct: 1 MRVATFNILNG---RVPADQHVDPTGLADAVKRLDADILALQEV---DQNQHRSGFADLT 54 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFI----EATFTINTQTLRIGN 110 ++ P GD+ A + Q +R+ Sbjct: 55 SVAAEAMDAPHHRFVAAIHGSPGATWVASTGDEQPDSAAYGVALLSRYPVKGWQVIRLEP 114 Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170 + ++ R A+ + E + + IP+ + + Sbjct: 115 VPFRVPMRFRGRLRPYLVTDEPRVAVLATVDSPVGECTVVGTHLSFIPRWNVHQLRKVVR 174 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230 V + ++ A S IDH+++ Sbjct: 175 ATLDCREPVILMGDLNMGPDQAERTTGLRAAASHATY-PVGAPSEQ------IDHVLVRG 227 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 T+ A SDH + ++ Sbjct: 228 PLTTSDSGAPALP-------ISDHRALWADVE 252 >gi|223040783|ref|ZP_03611050.1| putative endonuclease/exonuclease/phosphatase [Campylobacter rectus RM3267] gi|222877973|gb|EEF13087.1| putative endonuclease/exonuclease/phosphatase [Campylobacter rectus RM3267] Length = 445 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 42/255 (16%), Positives = 79/255 (30%), Gaps = 43/255 (16%) Query: 16 ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75 A+ ++A IKE N DII LQE E++ E ++ +Y V + + Sbjct: 64 AKFKTVSAKIKELNADIIALQEI--ENEQILKELMREASYKYFAFSNSKNGPVGLAVLSR 121 Query: 76 PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135 T + + F +N Q + NL+ P Sbjct: 122 VKPEKTRIFSVPNVKTRDILRLDFEVNGQKFSLLNLHFP--------------------- 160 Query: 136 RFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAI 195 +++ L++ + + N E+ +N+ Sbjct: 161 ---ARKNPLKQRKTAFITLKSALTDTEKVVVLGDFNAPYGDKELLGDLAASKNLANLWVF 217 Query: 196 RATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL--LHSARIDTKPRGWTKPSD 253 H YS A +DH++LS +A S + ++ + SD Sbjct: 218 L---PKHERYSHTSNNA----------LDHVLLSKDALSQNYVLNSF--KVELDGAQISD 262 Query: 254 HTPVIVSLDIPEPRK 268 H ++ L+ + K Sbjct: 263 HFALVFRLNFDKNAK 277 >gi|74007516|ref|XP_534504.2| PREDICTED: similar to LINE-1 reverse transcriptase homolog [Canis familiaris] Length = 1207 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 41/110 (37%), Gaps = 12/110 (10%) Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 + + E R L M +TD R H Y+F+ ++S RIDHI+ Sbjct: 90 NHNISKETRALNDTLDQMDYTDIYRTLHPNSTEYTFFSSAHGTFS-----RIDHILGHKS 144 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 + I SDH + + L+ +K + S + ++ I Sbjct: 145 GLNRYQKIGIVPCI-----FSDHNALKLELN--HNKKFGRTSNTWRLRTI 187 >gi|241205438|ref|YP_002976534.1| endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240859328|gb|ACS56995.1| Endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 369 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 22/64 (34%) Query: 223 IDHIMLSPEATSLLHSA-------------------RIDTKPR-GWTKP--SDHTPVIVS 260 +D++ LSP + ++ PR GW +P SDH PV+++ Sbjct: 306 LDYLWLSPALAAHNAGCLPEIIRSGQPYRTVFPPGQEVERYPRTGWDRPKASDHCPVVMT 365 Query: 261 LDIP 264 LD+P Sbjct: 366 LDLP 369 >gi|281347898|gb|EFB23482.1| hypothetical protein PANDA_006821 [Ailuropoda melanoleuca] Length = 126 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 23/106 (21%), Positives = 37/106 (34%), Gaps = 12/106 (11%) Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 +E R L + D R H YSF+ ++S RIDH + S Sbjct: 18 NIETRALNAILDELDLIDIYRTLHPRTKEYSFYSNAHGTFS-----RIDHALGHKTGLSQ 72 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 I SDH + + L+ K ++S + ++ I Sbjct: 73 YQKIEIIPCI-----FSDHNALKLELN--HKEKPGRNSNTWRLRTI 111 >gi|162147973|ref|YP_001602434.1| endonuclease/exonuclease/phosphatase family protein [Gluconacetobacter diazotrophicus PAl 5] gi|209542591|ref|YP_002274820.1| endonuclease/exonuclease/phosphatase [Gluconacetobacter diazotrophicus PAl 5] gi|161786550|emb|CAP56132.1| putative endonuclease/exonuclease/phosphatase family [Gluconacetobacter diazotrophicus PAl 5] gi|209530268|gb|ACI50205.1| Endonuclease/exonuclease/phosphatase [Gluconacetobacter diazotrophicus PAl 5] Length = 290 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 44/287 (15%), Positives = 77/287 (26%), Gaps = 45/287 (15%) Query: 2 SVVTVATWNVNSIRAR------------------IHNLAAWIKENNPDIICLQETKTEDK 43 + V+TWN++ + AR + LA + + DI+ QE + Sbjct: 25 RTIKVSTWNLDWLTARAAGDPTLPPDVHPRADADLRRLAVYAARLDADIVGFQEV--DSP 82 Query: 44 NFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 Y I + + P + Sbjct: 83 ALAARLFPPGRYRIVMTADPVVQRTGLAVATSL--TIERHPDLAALDVYPPTAPHPLRSG 140 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 + IG+ N + + L L + D+ Q Sbjct: 141 LDVTIGDG---TANLRVLVVHLKAGCRDAAPSDRRAACLTLARQMAVLDDWVAQRQDEGV 197 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223 ++ + + T Q+ T A +++ I Sbjct: 198 PFLVMGDFNRNLTPGDPFFHLLDQDGPLTLATAGRASPCWGGTYF--------------I 243 Query: 224 DHIMLSPEATSLLH--SARIDT----KPRGWTKPSDHTPVIVSLDIP 264 DH++L +A L S R+ T P SDH PV V L++P Sbjct: 244 DHLLLGNQARGWLRPDSLRVLTYDEQDPARAPALSDHCPVSVRLEMP 290 >gi|254427925|ref|ZP_05041632.1| endonuclease/exonuclease/phosphatase family [Alcanivorax sp. DG881] gi|196194094|gb|EDX89053.1| endonuclease/exonuclease/phosphatase family [Alcanivorax sp. DG881] Length = 310 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 32/267 (11%), Positives = 68/267 (25%), Gaps = 40/267 (14%) Query: 14 IRARIHNLAAWIKE--NNPDIICLQETKTEDKNFPFETLQS------LNYHIETCGQKSY 65 +RARI+ +A +I E N P ++ LQE + + L Y Sbjct: 65 LRARINAVAGFIVEDLNAPHVLALQEV---ENQAVLDRLADRLSQRGYRYRSALREGNDP 121 Query: 66 NGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYD 125 +G+ + + + Q A + + + + + Sbjct: 122 SGMDV-AIMYRSPVNIGSVSTLFSGQQFHGHALYARPPLVVALEAPLAANVVVVHWRSAR 180 Query: 126 DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQK 185 + R L + + + ++ + + + Sbjct: 181 NLKKAWVHEKRQTQAALLANWVTMQTSPLIVAGDFNTTWDEGRFSDSHERFEQSGLLNLW 240 Query: 186 LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI---- 241 YSF + +DHI +SP + + Sbjct: 241 SF-----------LPEKERYSF---RHRCRPQA----LDHIWVSPGLKPSVSKVAVSRGN 282 Query: 242 ------DTKPRGWTKPSDHTPVIVSLD 262 +G SDH ++V + Sbjct: 283 AGRYDSLYGSQGVAPISDHDALVVYFE 309 >gi|94267118|ref|ZP_01290753.1| Endonuclease/exonuclease/phosphatase [delta proteobacterium MLMS-1] gi|94269243|ref|ZP_01291411.1| Endonuclease/exonuclease/phosphatase [delta proteobacterium MLMS-1] gi|94272682|ref|ZP_01292167.1| Endonuclease/exonuclease/phosphatase [delta proteobacterium MLMS-1] gi|93450049|gb|EAT01420.1| Endonuclease/exonuclease/phosphatase [delta proteobacterium MLMS-1] gi|93451292|gb|EAT02176.1| Endonuclease/exonuclease/phosphatase [delta proteobacterium MLMS-1] gi|93452167|gb|EAT02834.1| Endonuclease/exonuclease/phosphatase [delta proteobacterium MLMS-1] Length = 248 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 43/275 (15%), Positives = 79/275 (28%), Gaps = 45/275 (16%) Query: 4 VTVATWNVNSIRA-------RIHNLAAWIKENNPDIICLQETKTEDKNFPF----ETLQS 52 + + ++N++ RA R +A I + PD++ LQE D P + + Sbjct: 3 LRIMSYNIH--RAIGVDRLFRPERIARIINHHQPDLVLLQEV---DVGVPRSRKLDLAEE 57 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 L + + VA+ + R T+ R Sbjct: 58 LARLCDYPHRALGLNVALR------QGHYGNATLSRFPIQRQRNIDLTLPDHKARGCLYT 111 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 +P S + + L F + ++ + + P + Sbjct: 112 NIVIDPDQSGPVALPVFNLHLGLSFHERPQQVGMVIRSPEFAELDPAAPCIVAGDFNDWF 171 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 + + + SF Y S+S G +D I L Sbjct: 172 TRLAPMFTEIMGFRCATSHSHGFQN--------SFLTY--PSFSPTGG--LDKIFLRGPL 219 Query: 233 TSLLHSARIDTKPR---GWTK-PSDHTPVIVSLDI 263 I + R G +K SDH PV+ L++ Sbjct: 220 -------EIIKRRRCRMGISKLASDHLPVLAELEL 247 >gi|328473167|gb|EGF44015.1| putative phospholipase C [Vibrio parahaemolyticus 10329] Length = 442 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 42/283 (14%), Positives = 82/283 (28%), Gaps = 43/283 (15%) Query: 4 VTVATWNVNSIRA-------RIHNLAAWIKENNPDIICLQETKTE-DKNFPFETLQSLNY 55 + + T+N+ ++ A R + ++K D++ LQE F E + Y Sbjct: 178 LKLMTYNIWALPAIASHIGERYELIPDYVK--GYDVLALQEVFASGRDAFLRELAKEYPY 235 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + +K +N + + + I H Sbjct: 236 QTKMLDKKGFNVYDGGVVIVSRYPIVNEAQYVFPDCSGTDCFADKGVNYAEIIKGGQAYH 295 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + +D + R +F R A NI Y+ N Sbjct: 296 VFATHTASFDTDTAREYRQRQFQQMR-------TMAQSLNIPNNETVVYSGDFNVNK--- 345 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYS--FWDYYADSWS-------KNKGIRIDHI 226 + A + Y+ +D ++++ +N +D++ Sbjct: 346 ------LKFPGDYQQMIANLSAMEPQYSGYTASTFDPRINNFAGEALSGGENVEY-LDYV 398 Query: 227 MLSPEA-TSLLHSARID---TKPRGWTKP---SDHTPVIVSLD 262 M+S E + R+D + G K SDH PV + Sbjct: 399 MVSNEYGVKSFNDNRVDVPRSTAEGLWKHYNLSDHFPVSAVIK 441 >gi|328958120|ref|YP_004375506.1| endonuclease/exonuclease/phosphatase [Carnobacterium sp. 17-4] gi|328674444|gb|AEB30490.1| endonuclease/exonuclease/phosphatase [Carnobacterium sp. 17-4] Length = 278 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 32/271 (11%), Positives = 65/271 (23%), Gaps = 15/271 (5%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 + + T N +S ++ L I + D+I QE + Y Sbjct: 1 MKLLTLNTHSWLEEQPYDKLDTLVKTILSHQFDVIAFQEINQPIDEAVLDLSDQFAYQAA 60 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + Q +E + + Sbjct: 61 DPTVQIKRNNFAFLVQQKLEQAGLRYTWTWQPAHVGYDIYDEGLAFLSLHPIKEIKTFYA 120 Query: 119 ITSTKYDDKISW-------IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC-YNPIIWE 170 S +D+ + + ++ F + + PI Sbjct: 121 SKSRAFDNYKTRPVLGVLIEDSWYFNLHLGWWDDKDDSFKEQWAVCSTVFKMLAEPIYLM 180 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230 D ++ L + D Y+ N+ +RID I + Sbjct: 181 GDFNNPAQMTNEGYDLVTRDWFDTFHLAEKRDKGYTVEKNIDGWAENNEKLRIDFIFTNH 240 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + S+++ + SDH V + L Sbjct: 241 PFE--VDSSKVFFNGKNNQIISDHYGVSIKL 269 >gi|324511832|gb|ADY44920.1| Neutral sphingomyelinase [Ascaris suum] Length = 392 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 39/281 (13%), Positives = 74/281 (26%), Gaps = 39/281 (13%) Query: 17 RIHNLAAWIKENNPDIICLQETKTED--KNFPFETLQSLNYHIETCGQKSYNGVAILSKY 74 R+ L + N DII LQE + Y + +GV I S++ Sbjct: 29 RLSKLCEALLSTNYDIISLQEIWSVRDFDRINSAIKDVYPYSYYFHSGFTGSGVCIFSRH 88 Query: 75 QPIEIVTHLPGDDLDVQARFIEATFTINTQTLR-----------IGNLYLPHGNPITSTK 123 + + H + F + + Sbjct: 89 AIVSTLMHRYSLNGFAHHIHRGDWFGGKVVGMVQLEIGTYRINFYATHLHAEYDRENDLY 148 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 ++S +F + I GD+N+ P + N + ++ Sbjct: 149 LPHRLSQAFELSQFVKHTSHAADLTILTGDFNLEPDDLGYRLIVDNAN-------LIDAW 201 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID- 242 N + + Y+ G R+D+IM + +D Sbjct: 202 LARPNKSGCETGMTCDRPDNCYT---ARNLKQPNPAGKRLDYIM------YKCGKSDVDL 252 Query: 243 --TKPRGWTKP-------SDHTPVIVSLDIPEPRKKQQDST 274 + R P SDH V + + +K++ Sbjct: 253 VMCENRLGRIPGDKQINYSDHLGVYADFVVSKQHEKEKQEH 293 >gi|182419446|ref|ZP_02950698.1| endonuclease/exonuclease/phosphatase family protein [Clostridium butyricum 5521] gi|237666690|ref|ZP_04526675.1| endonuclease/exonuclease/phosphatase family protein [Clostridium butyricum E4 str. BoNT E BL5262] gi|182376777|gb|EDT74349.1| endonuclease/exonuclease/phosphatase family protein [Clostridium butyricum 5521] gi|237657889|gb|EEP55444.1| endonuclease/exonuclease/phosphatase family protein [Clostridium butyricum E4 str. BoNT E BL5262] Length = 265 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 44/280 (15%), Positives = 77/280 (27%), Gaps = 37/280 (13%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET------KTEDKNFPFETLQS 52 + + T N +S + +I LA I E N D+I LQE K D + Sbjct: 1 MKLLTLNCHSWQEENQLDKIKYLAKVISEKNYDVIALQEVSQSIDCKIIDGILKEDNF-- 58 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 K S Y+ +H+ D + + IN+++ I Sbjct: 59 ------IVLLKEELNKFTKSNYEFYWDFSHIGYDIYEEGLAIMTRHKFINSESFFITKSM 112 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP--HDCYNPIIWE 170 K ++ ++ + I Sbjct: 113 DRTYWKTRKIIKSSIEINNKEVDFYSCHLGWWKDDEEPFTYQADKLLDTVNSKKTAIFMG 172 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYS--------FWDYYADSWSKNKGIR 222 + + + L N D T + S WD + +R Sbjct: 173 DFNNNAFVRNEGYDYLINKNLNDLYLKTDKSDEECSATVKGKIDGWD------ENKEKLR 226 Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 +D I+ S + +AR+ SDH V + +D Sbjct: 227 LDLIL-SNNLL-KVKNARVIFNGINKEIISDHYGVELEID 264 >gi|73996185|ref|XP_848835.1| PREDICTED: similar to LINE-1 reverse transcriptase homolog [Canis familiaris] Length = 1366 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 39/110 (35%), Gaps = 12/110 (10%) Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 + E R L M F D R H Y+F+ ++S RIDHI+ Sbjct: 249 KQNISKETRALNDTLDQMDFIDIYRTLHPNSTEYTFFSSAHGTFS-----RIDHILGHKS 303 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 + I SDH + + L+ +K + S + ++ I Sbjct: 304 GLNRYQKIGIVPCI-----FSDHNALKLELN--HNKKFGRTSNTWRLRTI 346 >gi|170074079|ref|XP_001870509.1| sphingomyelin phosphodiesterase 2 [Culex quinquefasciatus] gi|167870837|gb|EDS34220.1| sphingomyelin phosphodiesterase 2 [Culex quinquefasciatus] Length = 423 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 47/287 (16%), Positives = 81/287 (28%), Gaps = 38/287 (13%) Query: 1 MSV-VTVATWNVNSI------RA-RIHNLAAWIKENNPDIICLQETKTEDK--NFPFETL 50 M++ +++ T N+ I RA R+ + + N DI+ LQE +E Sbjct: 1 MALELSILTLNIWGIPYVSKDRAVRVEAIGEVLASGNYDIVSLQEVWSESDYRYLKERAA 60 Query: 51 QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL---- 106 +L + +G+A+LSKY + H + V F Sbjct: 61 AALPFAHYFYSGVVGSGLAVLSKYPIVSAFFHAWSVNGYVHRIQHGDWFGGKGVGFVKIS 120 Query: 107 -------RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159 + ++ +F + AGD N P Sbjct: 121 VNEQLVHVYAAHLHAEYDRSCDDYMAHRVIQAYDTAQFIENTQGNGVLQVLAGDLNTEPG 180 Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK 219 + T + ++ + R ++ + K Sbjct: 181 DLAYRVLQTC---SRLTDSADKKMYASGDLNTNEIARNSYTDPEA---------AKKSPK 228 Query: 220 GIRIDHIM--LSPEATSLLHSARI---DTKPRGWTKPSDHTPVIVSL 261 G RID+IM L R+ D P SDH V + Sbjct: 229 GKRIDYIMYRFGSHYEGKLLEHRLPLPDRIPGKDISYSDHEAVYAKI 275 >gi|269967746|ref|ZP_06181794.1| hypothetical protein VMC_32240 [Vibrio alginolyticus 40B] gi|269827652|gb|EEZ81938.1| hypothetical protein VMC_32240 [Vibrio alginolyticus 40B] Length = 287 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 30/276 (10%), Positives = 80/276 (28%), Gaps = 26/276 (9%) Query: 2 SVVTVATWNV-----NSIR-ARIHN----LAAWIKENNPDIICLQETKTEDKNFPFETLQ 51 + + + +WN+ + + +R L ++ + DI+ QE + Sbjct: 20 NSINLTSWNIEWLSIDGGKVSRTPQDFEKLTHYVDKTQADILAFQEV-----ESVAAMQK 74 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 ++ N ++ T + + + T LR + Sbjct: 75 AVGNDFTIYLSDRSNASNRHLQFNDTNQYTGFAVRNGVSVLDTPDFSITRGNSKLRFASY 134 Query: 112 YLPHGNPITSTKY--DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 + + N T + R +++ + + + + ++ Sbjct: 135 LVLNPNQENETHLLSVHLKAGCSGAYRNNRDCKIVKQQGQALAKWIKAREDNKQHYVVLG 194 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 + + + + + + + + + IDHI++S Sbjct: 195 DFNHNLGYQGDWLWDVISDNTSAKLVTKDTKAECKVR--SNRNPNKTHQFRSVIDHIIVS 252 Query: 230 PEATSLLHSARIDTKPRGWT----KPSDHTPVIVSL 261 + + S+ + T + K SDH PV +L Sbjct: 253 GDLKA---SSGVQTVFKTQDVLDYKLSDHCPVSTTL 285 >gi|307822071|ref|ZP_07652303.1| Endonuclease/exonuclease/phosphatase [Methylobacter tundripaludum SV96] gi|307736637|gb|EFO07482.1| Endonuclease/exonuclease/phosphatase [Methylobacter tundripaludum SV96] Length = 502 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 31/253 (12%), Positives = 78/253 (30%), Gaps = 23/253 (9%) Query: 20 NLAAWIKENNPDIICLQET----------KTEDKNFPFETLQSLNYHIETCGQKSYNGVA 69 +A I + N D++CLQE + + YHI T Sbjct: 260 QIAKAINDLNVDVVCLQEVAELWNDGAGDWASNSAKIINDRLATPYHIHTDWSHLGFD-- 317 Query: 70 ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKIS 129 + + + +I+++ + + + +P+ + Sbjct: 318 -KYREGVAILSKYPLLKQDAKYVSDSHDVHSIHSRKVVMAQIKVPYMGRVNVFSAHLSWW 376 Query: 130 WIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNM 189 +F E + ++ + + + + + Sbjct: 377 EDGFAGQFQRLCEWAEAKQSAHVNTTLLCGDFNIAAGSTGYHLVVDGHQYDDQYLAANSQ 436 Query: 190 GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT 249 G + I +D + + +Y +D + RID+I L+ + + SA++ + + Sbjct: 437 GVFEKIFRVNDPY----WQNYLSDDY------RIDYIFLNKTSELQVFSAKVLFTEQDYG 486 Query: 250 KPSDHTPVIVSLD 262 + SDH ++ + Sbjct: 487 RVSDHCGYFMTFE 499 >gi|29828020|ref|NP_822654.1| hypothetical protein SAV_1479 [Streptomyces avermitilis MA-4680] gi|29605122|dbj|BAC69189.1| hypothetical protein [Streptomyces avermitilis MA-4680] Length = 303 Score = 49.8 bits (117), Expect = 4e-04, Method: Composition-based stats. Identities = 43/268 (16%), Positives = 77/268 (28%), Gaps = 24/268 (8%) Query: 6 VATWNV--------NSIRARIHNLAAWIKENNPDIICLQE-TKTEDKNFPFETLQSLNYH 56 V T+N+ +S R + ++ P +I QE + ++ + ++ Sbjct: 49 VMTFNLRFASASEPHSWAVRRPVMRELLRRERPHVIGTQEGLYQQVRDIEADLGPHYDW- 107 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 I T + Y + + + T ++R+ Sbjct: 108 IGTGRAGGSRDEFMAVFYDTRRLAPLEYDHFWLSDTPDVIGSNTWGGGSIRMVTRVRFRD 167 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + + + ++A R AG P +A + Sbjct: 168 LADGDRPFHFLNTHLDNASQYARARAAALIADRIAGLDRSQPLVVTGDFNAAAHKNAVYE 227 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLY-SFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 + G D + LY +F Y G RID I+ SP + Sbjct: 228 --------TMLGAGLVDTWDTAAERGKLYGTFHGYKPLVPD---GDRIDWILASPGVAAH 276 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 A I+ PSDH PV SL + Sbjct: 277 C--ASINAFSSNGQFPSDHLPVQASLRL 302 >gi|330811892|ref|YP_004356354.1| Conserved hypothetical protein; putative exported protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380000|gb|AEA71350.1| Conserved hypothetical protein; putative exported protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 359 Score = 49.8 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 46/314 (14%), Positives = 80/314 (25%), Gaps = 57/314 (18%) Query: 4 VTVATWNV---NSIRAR---------------------IHNLAAWIKENNPDIICLQET- 38 + V TWNV R + +A I++ PD++ LQE Sbjct: 53 LKVMTWNVQFLAGKRYVFWHDLAQGNDESPTLEDMAFSLDEVARVIRDEQPDVVLLQELD 112 Query: 39 ---KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFI 95 K D + LQ + CG +++ A I L Sbjct: 113 KGAKASDYQDQLKLLQERLADLYPCGTSAFDWKADFVPDPHIFGSVGRQLATLSRYRIDH 172 Query: 96 EATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL----------- 144 + I + N + + L +R Sbjct: 173 AERVQLPVADTNIISRQFQPKNALLVSYLPLSGGGQLAVLNTHLERATEPDETLPRQITA 232 Query: 145 -----------EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTD 193 P + GD+N++P P + + K + + Sbjct: 233 VAKALDKFESAGTPWLIGGDFNLLPLGQYRRLPTEQRTPYSADSPLHLLWDKYPMIPTNN 292 Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253 D H + + +D++ SP A++ + SD Sbjct: 293 EAS-GIDREHWLTHYPNDPG--LNGPDRTVDYLFYSPRLKR--VEAQVRQD--DTLRISD 345 Query: 254 HTPVIVSLDIPEPR 267 H PVI +P Sbjct: 346 HLPVIARFLLPAAP 359 >gi|283457615|ref|YP_003362199.1| metal-dependent hydrolase [Rothia mucilaginosa DY-18] gi|283133614|dbj|BAI64379.1| metal-dependent hydrolase [Rothia mucilaginosa DY-18] Length = 292 Score = 49.8 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 44/298 (14%), Positives = 79/298 (26%), Gaps = 45/298 (15%) Query: 4 VTVATWNVNS------IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETL--QSLNY 55 + T N +S I A+I LA +I E D+I LQE + + LNY Sbjct: 1 MRFLTLNTHSWCEIHQI-AKIRTLAKFIIEQQVDVIALQEV----NQLTSTPVVKEPLNY 55 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + A+L + G + + + + I + Sbjct: 56 RGGAGVPVREDNYALLLVQAL-----NEMGATYEWTLTETHIGWDRYDECVAILSRMPIR 110 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 G D ++R A+ +E + ++ D E Sbjct: 111 GIRPIDMSPDYTYFQVQRRAAQAAL-IETPSGPFWCATTHMSWWDFDGEPLFAQEFTRLS 169 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFW------DYYADSWSKN---------KG 220 + +G A Y+F D + G Sbjct: 170 QALAECAETAPVLLGGDFNSAAHLPDEG-YAFVTSTGLIDTRTIAKHTKGENTVHREIAG 228 Query: 221 I-------RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271 RID + + + + SDH+ +++ +D P Q Sbjct: 229 WEGSSDAKRIDFVF-TDRLVDVASHTVVFRDN-SPEAISDHSGLLLEID-PASWAPQS 283 >gi|189242290|ref|XP_966849.2| PREDICTED: similar to endonuclease and reverse transcriptase-like protein [Tribolium castaneum] Length = 859 Score = 49.8 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 11/34 (32%), Positives = 17/34 (50%) Query: 9 WNVNSIRARIHNLAAWIKENNPDIICLQETKTED 42 WN N +RA L ++ DI+ + ETK + Sbjct: 16 WNANGLRAARDELEEFVDRLQLDIVLVCETKLQP 49 >gi|73946349|ref|XP_855521.1| PREDICTED: similar to LINE-1 reverse transcriptase homolog [Canis familiaris] Length = 1339 Score = 49.8 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 40/110 (36%), Gaps = 12/110 (10%) Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 + E R L M FTD R H Y+F+ ++S RIDHI+ Sbjct: 222 KQNISKETRALNDTLDQMDFTDIYRTLHPNSTEYTFFSSAHGTFS-----RIDHILGHKS 276 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 + I SDH + + L+ +K + S + ++ I Sbjct: 277 GLNRYQKIGIVPCI-----FSDHNALKLELN--HNKKFGRTSNTWRLRTI 319 >gi|281346193|gb|EFB21777.1| hypothetical protein PANDA_022020 [Ailuropoda melanoleuca] Length = 128 Score = 49.8 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 36/104 (34%), Gaps = 12/104 (11%) Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 E + L + D R H YSF+ ++S RIDH + S Sbjct: 22 ETKALNAILDELDLIDIYRTLHPRTKEYSFYSNAHGTFS-----RIDHALGHKTGLSQYQ 76 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 I SDH + + L+ K ++S + ++ I Sbjct: 77 KIEIIPCI-----FSDHNALKLELN--HKEKPGRNSNTWRLRTI 113 >gi|74002870|ref|XP_850679.1| PREDICTED: similar to LINE-1 reverse transcriptase homolog [Canis familiaris] Length = 1363 Score = 49.8 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 40/110 (36%), Gaps = 12/110 (10%) Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 + E R L M FTD R H Y+F+ ++S RIDHI+ Sbjct: 246 KQNISKETRALNDTLDQMDFTDIYRTLHPNSTEYTFFSSAHGTFS-----RIDHILGHKS 300 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 + I SDH + + L+ +K + S + ++ I Sbjct: 301 GLNRYQKIGIVPCI-----FSDHNALKLELN--HNKKFGRTSNTWRLRTI 343 >gi|289619041|emb|CBI54309.1| unnamed protein product [Sordaria macrospora] Length = 459 Score = 49.8 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 20/97 (20%), Positives = 40/97 (41%), Gaps = 9/97 (9%) Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK--NKGIRIDHI 226 + + +Q +K + + D RA + Y+F+ ++ W N R+D + Sbjct: 366 NKRAGAWLGPGKQDMEKEKCLDAVDVFRAIYGMEKRYTFYS-QSNVWGTSCN---RVDMV 421 Query: 227 MLSPEATS--LLHSARIDTKPRGWTKPSDHTPVIVSL 261 ++S + + I P+ PSDH P+ V + Sbjct: 422 IVSKQLWEDGRVIDTGILNTPQ-ERGPSDHVPIWVEI 457 >gi|169834285|ref|YP_001694221.1| metal-dependent hydrolase [Streptococcus pneumoniae Hungary19A-6] gi|168996787|gb|ACA37399.1| metal-dependent hydrolase [Streptococcus pneumoniae Hungary19A-6] Length = 271 Score = 49.8 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 31/264 (11%), Positives = 72/264 (27%), Gaps = 14/264 (5%) Query: 4 VTVATWNVNSI--RARIHNL---AAWIKENNPDIICLQETK-------TEDKNFPFETLQ 51 + T N +S+ + I E + D+IC QE E + Sbjct: 1 MKFLTLNTHSLMEKEAEEKFQILLEDILEKDYDLICFQEINQEMTSSEVEVNDLYQALPA 60 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 + H + + ++ K + G D + I + I + + + ++ Sbjct: 61 AEPIHQDHYVRLLVEKLSEQGKNYYWTWAYNHIGYDRYHEGVAILSKTPIEAREILVSDV 120 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 P + + K + ++ ++ + Sbjct: 121 DDPTDYHTRRVALAETVVDGKELAVASVHLSWWDKGFQEEWARFEAVLKKLNKPLLLAGD 180 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 + +G DA T + Y+ + +RID++ + E Sbjct: 181 FNNPAGQEGYQAILASPLGLQDAFEVTQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTTKE 240 Query: 232 ATSLLHSARIDTKPRGWTKPSDHT 255 + + + + SDH Sbjct: 241 LA--VENLHVVFDGNKSPQVSDHY 262 >gi|223634725|sp|Q5XJA0|TYDP2_DANRE RecName: Full=Tyrosyl-DNA phosphodiesterase 2; Short=Tyr-DNA phosphodiesterase 2; AltName: Full=5'-tyrosyl-DNA phosphodiesterase; Short=5'-Tyr-DNA phosphodiesterase; AltName: Full=TRAF and TNF receptor-associated protein homolog gi|133777713|gb|AAI15077.1| Ttrap protein [Danio rerio] Length = 369 Score = 49.8 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 9/44 (20%) Query: 2 SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQET 38 S +++ +WNV+ + RAR L +++ PD++ LQE Sbjct: 121 SKLSIISWNVDGLDTLNLADRAR--GLCSYLALYTPDVVFLQEL 162 >gi|119226210|ref|NP_001073171.1| tyrosyl-DNA phosphodiesterase 2 [Danio rerio] gi|102230105|gb|ABF70183.1| Ttrap [Danio rerio] Length = 369 Score = 49.8 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 9/44 (20%) Query: 2 SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQET 38 S +++ +WNV+ + RAR L +++ PD++ LQE Sbjct: 121 SKLSIISWNVDGLDTLNLADRAR--GLCSYLALYTPDVVFLQEL 162 >gi|94733763|emb|CAK05424.1| traf and tnf receptor associated protein, like [Danio rerio] Length = 383 Score = 49.8 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 9/44 (20%) Query: 2 SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQET 38 S +++ +WNV+ + RAR L +++ PD++ LQE Sbjct: 135 SKLSIISWNVDGLDTLNLADRAR--GLCSYLALYTPDVVFLQEL 176 >gi|94732377|emb|CAK05007.1| novel protein similar to vertebrate TRAF and TNF receptor associated protein (TTRAP) [Danio rerio] Length = 387 Score = 49.8 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 9/44 (20%) Query: 2 SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQET 38 S +++ +WNV+ + RAR L +++ PD++ LQE Sbjct: 139 SKLSIISWNVDGLDTLNLAERAR--GLCSYLALYTPDVVFLQEL 180 >gi|53734141|gb|AAH83404.1| Ttrap protein [Danio rerio] Length = 379 Score = 49.8 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 9/44 (20%) Query: 2 SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQET 38 S +++ +WNV+ + RAR L +++ PD++ LQE Sbjct: 131 SKLSIISWNVDGLDTLNLADRAR--GLCSYLALYTPDVVFLQEL 172 >gi|73971897|ref|XP_855057.1| PREDICTED: similar to LINE-1 reverse transcriptase homolog [Canis familiaris] Length = 1344 Score = 49.8 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 40/110 (36%), Gaps = 12/110 (10%) Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 + E R L M FTD R H Y+F+ ++S RIDHI+ Sbjct: 228 KQNISKETRALNDTLDQMDFTDIYRTLHPNSTEYTFFSSAHGTFS-----RIDHILGHKS 282 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 + I SDH + + L+ +K + S + ++ I Sbjct: 283 GLNRYQKIGIVPCI-----FSDHNALKLELN--HNKKFGRTSNTWRLRTI 325 >gi|325109290|ref|YP_004270358.1| endonuclease/exonuclease/phosphatase [Planctomyces brasiliensis DSM 5305] gi|324969558|gb|ADY60336.1| Endonuclease/exonuclease/phosphatase [Planctomyces brasiliensis DSM 5305] Length = 247 Score = 49.8 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 35/277 (12%), Positives = 66/277 (23%), Gaps = 58/277 (20%) Query: 4 VTVATWNVN---SIRARIHNLAAWIKE---NNPDIICLQET-----KTEDKNFPFETLQS 52 + + ++N+ R R +N I NPDII LQE +T N P E L Sbjct: 1 MRLLSYNIQKGYGGRDRRYNFERTIAAIEHENPDIIVLQEVDHNERRTRFDNQP-EILSD 59 Query: 53 L------NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 +Y K G ++S++ + + L Sbjct: 60 YFRYEATDYQFNHRVSKGGYGNLLISRFPFHSVTQVCLKLKHRKKRGAQVVVVDSPEGKL 119 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 + +L + + + + L + + + P Sbjct: 120 LLVGWHLGLKEKQRHAQVNHLLDHVDLQDNLDLPTLIVGDFNDWRNTLADGPFAKHG--- 176 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226 ++F +G D Sbjct: 177 ---FEQLTRPPSRYRTFPAYLPIGSLDKAFCRGPI------------------------- 208 Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + R+ SDH P++V + Sbjct: 209 --------NVRDVRVVRNQLTKE-ASDHLPLLVDFHL 236 >gi|94967527|ref|YP_589575.1| endonuclease/exonuclease/phosphatase [Candidatus Koribacter versatilis Ellin345] gi|94549577|gb|ABF39501.1| Endonuclease/exonuclease/phosphatase [Candidatus Koribacter versatilis Ellin345] Length = 246 Score = 49.8 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 39/278 (14%), Positives = 74/278 (26%), Gaps = 48/278 (17%) Query: 4 VTVATWNVN---SI--RARIHNLAAWIKENNPDIICLQETKTEDKNFPFET--------L 50 + +AT+NV+ + R +A I+E + D+I +QE P L Sbjct: 3 LRIATYNVHKCRGLDRRTDPERIATVIRELDADVIAMQEILDVRDGHPGHDQARRIATNL 62 Query: 51 QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 Q + ++ + + + R + +L + Sbjct: 63 QEYEWRFGENRSLHGGAYGNMTLSRLPITASENYDITWRHRERRGCLRTDV---SLTDRS 119 Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170 + + ++ + + K +R E P I GD+N Sbjct: 120 VLHLFNLHLGTSFVERRHQARKLLTEAVLRRAEFTGPRIVLGDFN----EWTRGLASRLM 175 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230 +E R + + + +DH Sbjct: 176 GTEFEAIEPRTHLRYARTYPGVMPLLH-------------------------LDHFYFDR 210 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268 L S I R SDH P++ + E K Sbjct: 211 TL--SLESYCIHRS-RTALIASDHLPLVSEFSLAERTK 245 >gi|242053339|ref|XP_002455815.1| hypothetical protein SORBIDRAFT_03g025683 [Sorghum bicolor] gi|241927790|gb|EES00935.1| hypothetical protein SORBIDRAFT_03g025683 [Sorghum bicolor] Length = 377 Score = 49.8 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 39/259 (15%), Positives = 79/259 (30%), Gaps = 32/259 (12%) Query: 6 VATWNVNSI--RARIHNLAAWIKENNPDIICLQETKTED-KNFPFETLQSLNYHIETCGQ 62 + TWNV + RAR + +++ + + CL ETK + L + Sbjct: 116 IFTWNVRGLNSRARRDVVRSFLLQERVFVACLVETKVDVMDRVMLLDLMGAGFDYFVLPA 175 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 +G I++ + + A +I TL I + + S Sbjct: 176 VGASGGIIVA----------------WLCGDWSVARHSIRNFTLTINIHAVDGSSQPWSL 219 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 F ++ E+ D+ +N I D + Sbjct: 220 CAVYGPVDDNLKPDFLAEIREVG------ADFPSPLLFSGDFNMIYRAQDKNNNRLNLAA 273 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 ++ + A+ + LY++ ++ + R+D + L R Sbjct: 274 MRRFRRALDAMALDELYLHGRLYTW----SNERVRLTLERLDRAFATLPWLELFPDHR-L 328 Query: 243 TKPRGWTKPSDHTPVIVSL 261 SDH+P+++ L Sbjct: 329 RALSSEC--SDHSPLLLQL 345 >gi|296112314|ref|YP_003626252.1| endonuclease/exonuclease/phosphatase [Moraxella catarrhalis RH4] gi|295920008|gb|ADG60359.1| endonuclease/exonuclease/phosphatase [Moraxella catarrhalis RH4] gi|326561824|gb|EGE12159.1| endonuclease/exonuclease/phosphatase [Moraxella catarrhalis 7169] gi|326563256|gb|EGE13523.1| endonuclease/exonuclease/phosphatase [Moraxella catarrhalis 46P47B1] gi|326563370|gb|EGE13635.1| endonuclease/exonuclease/phosphatase [Moraxella catarrhalis 12P80B1] gi|326576470|gb|EGE26378.1| endonuclease/exonuclease/phosphatase [Moraxella catarrhalis CO72] Length = 249 Score = 49.8 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 36/270 (13%), Positives = 70/270 (25%), Gaps = 39/270 (14%) Query: 1 MSVVTVATWNV-------NSIRARIHNLAAWIKENNPDIICLQETKTEDKN--FPFETLQ 51 M +T+ ++N+ N + R+ + + + NPDI+CLQE + ++ F Sbjct: 1 MKSITITSYNIHKGMSPTNRL-VRLMGMKDALLKTNPDILCLQEVQGQNLKRTIDFAEFP 59 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 H + + + L I Sbjct: 60 DGGQHEWFGEFLGIAS----------SYGKNAEYEHGHHGNAVLSRHPLDPKHNLNITVN 109 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 L + + D L L + + + I + Sbjct: 110 RLEKRGVLHCEVHPDGWRRPVVVLCCHLNLLHRDRIKQYQAIRDYIVTLPADASL----- 164 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY--SFWDYYADSWSKNKGIRIDHIMLS 229 S + Q + H Y +F + +D I + Sbjct: 165 -ILAGDFNDWSKKSCQALSSLGLSEVFLQVHGEYPATFPAKMPV-------LSLDRIYV- 215 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 +H+A + W+ SDH P+ Sbjct: 216 RRL--KVHNAMVHGGV-PWSNLSDHLPISA 242 >gi|264677073|ref|YP_003276979.1| endonuclease/exonuclease/phosphatase [Comamonas testosteroni CNB-2] gi|262207585|gb|ACY31683.1| Endonuclease/exonuclease/phosphatase [Comamonas testosteroni CNB-2] Length = 307 Score = 49.8 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 42/303 (13%), Positives = 92/303 (30%), Gaps = 58/303 (19%) Query: 4 VTVATWNV------NSIRARIHNLAAWIK----ENNPDIICLQETKTEDKNF---PFETL 50 + + TWNV + + + + ++ D++C+QE + P + L Sbjct: 17 MNILTWNVQWCCGMDGLVSVERIVRHALQMGEQSGGLDVLCMQEIAVNYPDLQGRPGDQL 76 Query: 51 QSL-----NYHIET--------CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA 97 L + I G I ++ + + +L + R ++ Sbjct: 77 AELKALLPGWQIFFGASVDEFTPRGHQRFGNLIATRLPVLLVQHYLLPMPAEADMRCMQR 136 Query: 98 TFTINTQ------TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFAS------------ 139 ++ T +RI +L + + + ++ + Sbjct: 137 MCSVVTVDDAALGPVRIMTTHLEYFSARQRMAQAGALRALQMQACALADAPPQPASDGSP 196 Query: 140 -QRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT 198 Q + GD+N P + V LQ + ++ Sbjct: 197 YQTKPHTRHAVLCGDFNFEPHEPEYA--------VLSAPWVAGEEGCLQAGQWRNSWDVL 248 Query: 199 HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVI 258 + + +W G D I +S +H+ +D+ T+ SDH PV+ Sbjct: 249 YPGQPQPPTFRLVDRTWGAEPGA-CDLIWVSDSLCQRVHTWSVDSA----TQASDHQPVM 303 Query: 259 VSL 261 ++L Sbjct: 304 LTL 306 >gi|229159517|ref|ZP_04287533.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus R309803] gi|228623974|gb|EEK80784.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus R309803] Length = 247 Score = 49.8 bits (117), Expect = 5e-04, Method: Composition-based stats. Identities = 31/252 (12%), Positives = 53/252 (21%), Gaps = 14/252 (5%) Query: 18 IHNLAAWIKENNPDIICLQET------KTEDKNFPFETLQSLNYHIETCGQKSYNGVAIL 71 I LA I+E D+I LQE K N + L + Sbjct: 4 IKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGLLLLEELKALHVKDYNITWD 63 Query: 72 SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWI 131 + ++ + F + I + Sbjct: 64 FSHIGYDVYEEGLAIITKHSIIKEDTFFVSENKDTAYWKTRKIVSATIAYNGKNITFYSC 123 Query: 132 KRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191 + + + + E Sbjct: 124 HLGWWNDEEESFKGQIDRLMERVDSNALAFLMGDFNNNARLEGEGYEYTMQKGLYDTYEL 183 Query: 192 TDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP 251 + WD +RID I+ + + S+++ Sbjct: 184 AIEKDEGTTVQGKIAGWD------ENKHNLRIDLILCNQG--KTVRSSKVIFNGINRNVI 235 Query: 252 SDHTPVIVSLDI 263 SDH V V LDI Sbjct: 236 SDHFGVEVQLDI 247 >gi|282880174|ref|ZP_06288894.1| endonuclease/exonuclease/phosphatase family protein [Prevotella timonensis CRIS 5C-B1] gi|281306047|gb|EFA98087.1| endonuclease/exonuclease/phosphatase family protein [Prevotella timonensis CRIS 5C-B1] Length = 267 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 41/266 (15%), Positives = 66/266 (24%), Gaps = 35/266 (13%) Query: 3 VVTVATWNVNSIRARIHNL-----AAWIKENNPDIICLQET-----KTEDKNFPFETLQS 52 V V T+NV R+ + A +K D ICL E + + + +Q Sbjct: 21 TVKVITFNV---RSFEPDFDTKPYADLLKGEQADFICLNEVENRSSRQQKNGKFRDVVQE 77 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 L G S + + + + + + Sbjct: 78 L------ALNLHMFGTFGYSYNLSNKQGEYPEANYKYCMNELYGNAILSRYPIMNVISKQ 131 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 LP P S I+ + R+ G Sbjct: 132 LP--RPKGSADQRSVIAADVLLPSGKTIRIISTHLDHIGGQLEQAKVITSDEITSSTLPT 189 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 + + N T R +D Y S ID I S Sbjct: 190 ILTGDMNQGVGSSVINQYLTRYERMDNDNG------TYMGMSK-------IDFIFGSKG- 235 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVI 258 L S ++ + + SDH PV+ Sbjct: 236 QWNLQSCKVLERFLNQKELSDHCPVL 261 >gi|222085749|ref|YP_002544279.1| hypothetical protein Arad_2072 [Agrobacterium radiobacter K84] gi|221723197|gb|ACM26353.1| conserved hypothetical protein [Agrobacterium radiobacter K84] Length = 277 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 11/52 (21%), Positives = 23/52 (44%), Gaps = 2/52 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQE-TKTEDKNFPFETLQSLN 54 + + + NV R L ++ + + D++CLQE +T D + + Sbjct: 11 LRIVSLNVWGGRLHEP-LMRYLVDIDADVLCLQEVVRTPDAEADWLVYRDHG 61 >gi|168180262|ref|ZP_02614926.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum NCTC 2916] gi|182668813|gb|EDT80791.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum NCTC 2916] Length = 263 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 34/274 (12%), Positives = 74/274 (27%), Gaps = 25/274 (9%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYHI 57 + + T N +S + +I LA I ENN D+I LQE ++ + F+ ++ N+ Sbjct: 1 MKILTLNCHSWQEEKQLEKIKYLAKVIYENNYDVIALQEVSQSINSKILFDNIKEDNFAF 60 Query: 58 E-TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT-------QTLRIG 109 + + I + L + + + Sbjct: 61 ILIKELEKLGENRFKILWDFAHIGYDKYEEGLAILTKHPIKEKKSFYISKSKDKNFWKTR 120 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 + + + Y + ++ + + + D N Sbjct: 121 KIIKCKIDYNNNPIYFYSCHLGWWDDEEEDFKSQVNKLVQELKEKETCILMGDYNNDAFL 180 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 N L ++ D + K +R+D I+ + Sbjct: 181 NNKGYDYLINKKLKDIYHLARSKDNGVTAIGDIDGW---------KGNTKNMRLDLILSN 231 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + ++ SDH V ++I Sbjct: 232 KNL--KVEYCKVIFNGIRKEIISDHFGVEAKIEI 263 >gi|147816006|emb|CAN72456.1| hypothetical protein VITISV_026051 [Vitis vinifera] Length = 1130 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 32/235 (13%), Positives = 71/235 (30%), Gaps = 28/235 (11%) Query: 26 KENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPG 85 ++ D++C+QETK + ++SL + A + + Sbjct: 106 RKQKVDLVCIQETKIQ--LMTDGVVKSLGVGRFLDWRTLEAAGAAGGVLICWDKRSLEML 163 Query: 86 DDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELE 145 + + Q T+ + + Y K + + + Sbjct: 164 EWEEGQFSISCKFRTVENGAVWVFT---------GVYGYFTKEDRECLWDELGAVKGLWG 214 Query: 146 EPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY 205 +P GD+N+I + T +R+ Q + ++ D + Sbjct: 215 DPWCVGGDFNVILAQGER------SRQGRVTPAMRRFAQVMDDLELIDJPLQ----GGSF 264 Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 ++ + R+D ++SP + T+ R SDH P+ + Sbjct: 265 TW----SGGLHNQAWARLDRFLVSPIWLDQFSNV---TQKRLSRPISDHFPITIE 312 >gi|74007229|ref|XP_854893.1| PREDICTED: similar to LINE-1 reverse transcriptase homolog [Canis familiaris] Length = 1346 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 40/110 (36%), Gaps = 12/110 (10%) Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 + E R L M FTD R H Y+F+ ++S RIDHI+ Sbjct: 229 KQNISKETRALNDTLDQMDFTDIYRTLHPNSTEYTFFSSAHGTFS-----RIDHILGHKS 283 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 + I SDH + + L+ +K + S + ++ I Sbjct: 284 GLNRYQKIGIVPCI-----FSDHNALKLELN--HNKKFGRTSNTWRLRTI 326 >gi|270016062|gb|EFA12510.1| hypothetical protein TcasGA2_TC004208 [Tribolium castaneum] Length = 841 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 11/34 (32%), Positives = 18/34 (52%) Query: 9 WNVNSIRARIHNLAAWIKENNPDIICLQETKTED 42 WN N +RA + L ++ DI+ + ETK + Sbjct: 139 WNANGLRAARNELEEFVDRLQLDIVLVCETKLQP 172 >gi|254509579|ref|ZP_05121646.1| endonuclease/exonuclease/phosphatase family protein [Rhodobacteraceae bacterium KLH11] gi|221533290|gb|EEE36278.1| endonuclease/exonuclease/phosphatase family protein [Rhodobacteraceae bacterium KLH11] Length = 236 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 34/273 (12%), Positives = 62/273 (22%), Gaps = 60/273 (21%) Query: 2 SVVTVATWNVN---SI--RARIHNLAAWIKENNPDIICLQET--KTE--DKNFPFETLQS 52 S + +A++N+ + R + + I+ DI+ LQE + P L Sbjct: 7 STLRLASYNIQKCVGLDLRRQPQRILQVIESLQADIVVLQEADKRLPPRPAALPHFMLDE 66 Query: 53 LNYHIETCGQKS----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108 + I G + I T + F LR+ Sbjct: 67 AGWQIVDLGGAGSLGWHGNAVIWRGDAIEVRQTGHHDLPGLEPRGAVRVEFDTQIGPLRV 126 Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168 ++L G S + + + ++ P + Sbjct: 127 MGMHL--GLLSASRRRQITHIRHCDSDLADMPTVWAGDFNEWSR----QPVLDHLAPDMR 180 Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 + + +D I + Sbjct: 181 FLPPVPSFPAAQPLGA--------------------------------------LDRIAV 202 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + LH R SDH PV L Sbjct: 203 GQGLEAALHGV---HNARPAHIASDHLPVWADL 232 >gi|189242197|ref|XP_972152.2| PREDICTED: similar to GH03753p, partial [Tribolium castaneum] Length = 841 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 11/34 (32%), Positives = 18/34 (52%) Query: 9 WNVNSIRARIHNLAAWIKENNPDIICLQETKTED 42 WN N +RA + L ++ DI+ + ETK + Sbjct: 136 WNANGLRAARNELEEFVDRLQLDIVLVCETKLQP 169 >gi|73999443|ref|XP_852480.1| PREDICTED: similar to LINE-1 reverse transcriptase homolog [Canis familiaris] Length = 1338 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 40/110 (36%), Gaps = 12/110 (10%) Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 + E R L M FTD R H Y+F+ ++S RIDHI+ Sbjct: 221 KQNISKETRALNDTLDQMDFTDIYRTLHPNSTEYTFFSSAHGTFS-----RIDHILGHKS 275 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 + I SDH + + L+ +K + S + ++ I Sbjct: 276 GLNRYQKIGIVPCI-----FSDHNALKLELN--HNKKFGRTSNTWRLRTI 318 >gi|330817173|ref|YP_004360878.1| Endonuclease/exonuclease/phosphatase [Burkholderia gladioli BSR3] gi|327369566|gb|AEA60922.1| Endonuclease/exonuclease/phosphatase [Burkholderia gladioli BSR3] Length = 289 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 43/306 (14%), Positives = 81/306 (26%), Gaps = 67/306 (21%) Query: 4 VTVATWNV-----NSIRARI-HNLAAWIKENNPDIICLQE-TKTED--------KNFPFE 48 + + WNV S R + +A + D++CLQE T+ D F Sbjct: 1 MQLINWNVQWGRDASGRVDLGRTVAEARALADFDVLCLQELTRGFDSLPGGPGADQFAEL 60 Query: 49 TLQSLNY---------------HIETCGQKSYNGVAILSKYQPIEIVTHLPGDD-----L 88 Y + G AI ++ I+ H Sbjct: 61 AALLPGYTVIEALAVDLPLDPGQAAAGAPRRQFGNAIATRLPVGRILRHTLPWPADDSVP 120 Query: 89 DVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQR------- 141 + +EA LR+ +L + + + R ++ Sbjct: 121 SMPRVALEANLQTAHGPLRVVTTHLEFYSGAQRMAQVEALREQHREAIDHARHPASAEKT 180 Query: 142 ------LELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAI 195 + GD+N + + + A ++ Sbjct: 181 GSAFTASARARDAVVCGDFNSAWRDDAYRRLLAPIDGA---PAFVDAWMHAHPGKTPPPT 237 Query: 196 RATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHT 255 HDT + S + D + ++ + ID+ R SDH Sbjct: 238 AGVHDTEQ------WRQGSLTC------DFVFVTETLRERILRCEIDSTTR----ASDHQ 281 Query: 256 PVIVSL 261 P+++ L Sbjct: 282 PILLEL 287 >gi|301165660|emb|CBW25231.1| putative endonuclease/exonuclease/phosphatase family protein [Bacteriovorax marinus SJ] Length = 256 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 37/270 (13%), Positives = 73/270 (27%), Gaps = 27/270 (10%) Query: 3 VVTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNF-PFETLQS 52 ++ VA+ N+ N R L+ I PD++ QE + + L Sbjct: 1 MLKVASTNIRFDNPADAPNDWAGRKSLLSELINNFAPDLLGTQE--GREPQLKDLDQLLP 58 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 + I+ + P+ + GD + + T + ++ R+ Sbjct: 59 AHTLIDGHRSWITERMYPCIFVNPLTVEVKESGDIWLSETPYEAGTKSFDSAFPRLCTWI 118 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 ++++ I + +P D Sbjct: 119 HGVFKDTKKEFIYVNTHLDHVKSHTRRSQIQVLISEIKKINTKSLPIILTGDFNESPAED 178 Query: 173 ACFTLEVRQSF-QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 + + + + H ++ ++G RID I+ Sbjct: 179 VREVINREWTNLYDAWQFLGKEEETSFHKFDGVH------------DEGSRIDWILTDRF 226 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 S I + R PSDH PV S Sbjct: 227 F--KTKSIEIIKEHREEIYPSDHFPVFASF 254 >gi|160885982|ref|ZP_02066985.1| hypothetical protein BACOVA_03988 [Bacteroides ovatus ATCC 8483] gi|156108795|gb|EDO10540.1| hypothetical protein BACOVA_03988 [Bacteroides ovatus ATCC 8483] Length = 366 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 44/272 (16%), Positives = 81/272 (29%), Gaps = 33/272 (12%) Query: 3 VVTVATWNVNSIR------ARIHNLAAWIKENNPDIICLQETKTEDK---NFPFETLQSL 53 ++TVAT+NV++ + +A++++ DI+C QE D+ + L Sbjct: 109 ILTVATYNVDAFNHEHTGYSC-KEIASYMRNLQADILCFQEFGINDEFGVDSIAAVLSDW 167 Query: 54 NYHIETCGQKSYNGV------AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107 Y+ + + + K + + + L T + L+ Sbjct: 168 PYYYIPISPEGKHLLQLAVFSRYPIKEENLIVYPDSKNCSLWCDIETNARTIRLFNNHLQ 227 Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167 + DD + L E + Y I Sbjct: 228 TTEVSQNKRKLEKGLHTDDSQRVERAALGLIDGLHENFRKRAVQANTLKQLIAASPYPTI 287 Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227 I D + + H +Y+F + K+ +RID+I+ Sbjct: 288 I-CGDFNSLPSSYVYHTVKGDKLQDGFQTSGHGY--MYTF------KFFKHL-LRIDYIL 337 Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 SPE S SDH PV++ Sbjct: 338 HSPELNST-------DYFSPDLTYSDHNPVVM 362 >gi|73973206|ref|XP_536892.2| PREDICTED: similar to LINE-1 reverse transcriptase homolog [Canis familiaris] Length = 1385 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 25/110 (22%), Positives = 40/110 (36%), Gaps = 12/110 (10%) Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 + E R L M FTD R H Y+F+ ++S RIDHI+ Sbjct: 268 KQNISKETRALNDTLDQMDFTDIYRTLHPNSTEYTFFSSAHGTFS-----RIDHILGHKS 322 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 + I SDH + + L+ +K + S + ++ I Sbjct: 323 GLNRYQKIGIVPCI-----FSDHNALKLELN--HNKKFGRTSNTWRLRTI 365 >gi|154270414|ref|XP_001536062.1| predicted protein [Ajellomyces capsulatus NAm1] gi|150409989|gb|EDN05377.1| predicted protein [Ajellomyces capsulatus NAm1] Length = 954 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 28/75 (37%), Gaps = 8/75 (10%) Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 + W G ID LSP L I + K SDH P+ +L++ Sbjct: 100 TTWQDRGSP-----GTTIDLTFLSPLLHDKLRRCAIAEEA---CKGSDHKPIETTLELTP 151 Query: 266 PRKKQQDSTSQNMKP 280 K+ + +N +P Sbjct: 152 IPKEAERRNWKNAEP 166 >gi|189069263|dbj|BAG36295.1| unnamed protein product [Homo sapiens] Length = 423 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 43/297 (14%), Positives = 89/297 (29%), Gaps = 37/297 (12%) Query: 4 VTVATWNVNSI------RA-RIHNLAAWIKENNPDIICLQETKT-EDKNFPFETLQS-LN 54 + + N I RA R+ L ++ + + D+ L+E + +D + + L Sbjct: 9 LRIFNLNCWGIPYLSKHRADRMRRLGDFLNQESFDLALLEEVWSEQDFQYLRQKLSPTYP 68 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN---- 110 +G+ + SK+ E+ + + F+ L + + Sbjct: 69 AAHHFRSGIIGSGLCVFSKHPIQELTQRIYTLNGYPYMIHHGDWFSGKAVGLLVLHLSGM 128 Query: 111 -------LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 N +++ +F + + ++ GD N+ P+ C Sbjct: 129 VLNAYVTHLHAEYNRQKDIYLAHRVAQAWELAQFIHHTSKKADVVLLCGDLNMHPEDLGC 188 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223 W LE R + G+RI Sbjct: 189 CLLKEWTGLHDAYLETRDFKGSEEGNTMVPKNCYVSQQEL-----------KPFPFGVRI 237 Query: 224 DHIM---LSPEATSLLHSARIDT--KPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTS 275 D+++ +S S T P T SDH ++ +L + +Q S++ Sbjct: 238 DYVLYKAVS-GFYISCKSFETTTGFDPHRGTPLSDHEALMATLFVRHSPPQQNPSST 293 >gi|58583572|ref|YP_202588.1| hypothetical protein XOO3949 [Xanthomonas oryzae pv. oryzae KACC10331] gi|58428166|gb|AAW77203.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae KACC10331] Length = 342 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 33/271 (12%), Positives = 65/271 (23%), Gaps = 26/271 (9%) Query: 4 VTVATWNV------NS---IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 + V ++NV + R ++ A IK+ +PD+ QE E + L + Sbjct: 89 LRVMSFNVRVPMDSDGDKRWTVRRTSMVALIKQAHPDVFGTQELVQEQAQYLASHLPAYR 148 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 + + + + V L ++ + Sbjct: 149 WFGKGRRADGSDEHMGVFYDSNALSVIESGDFWLSEIPEIPGSSSWNTDLPRMVTWALFE 208 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 N R + + +P + +D Sbjct: 209 RRNDKRRFYL----LNTHLPHRDQDEAAREHVARVILSRIATLPADIPVVVTGDFNSDPD 264 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 + + T ++ RID I+ T Sbjct: 265 QGTYRTLTAVLGDARAHVAKPQGPEKTFQNFTTQPTR----------RIDWILF-RGLTP 313 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 G PSDH PV+ + + P+ Sbjct: 314 --TRFSTLDARSGGILPSDHYPVLAAFEWPQ 342 >gi|256419904|ref|YP_003120557.1| endonuclease/exonuclease/phosphatase [Chitinophaga pinensis DSM 2588] gi|256034812|gb|ACU58356.1| Endonuclease/exonuclease/phosphatase [Chitinophaga pinensis DSM 2588] Length = 371 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 40/280 (14%), Positives = 84/280 (30%), Gaps = 43/280 (15%) Query: 4 VTVATWNVN--SI------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55 +T+ ++NV + + + A IK+ DI+CLQ+ T +K F + Sbjct: 105 LTIMSYNVAQFGLYREKDSKYNREAMFALIKKQELDIVCLQDFYTSEKKNDFNNRED--- 161 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ-TLRIGNLYLP 114 + K + + + + + I + Sbjct: 162 --ISREMKLPYRFFSSDFNRDGMQHWGSIIYSRYPIIKSDKLKMSYGPRSESLIYADIVK 219 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 +G+ I + ++++ +E NI+ + D Y + D Sbjct: 220 NGDTIRIINMHLASYRFNERDYRSIEKIKKQEDTGLVATRNIVQKMRDAYVDRSKQADIV 279 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYA---DSW-SKNKG---------- 220 + +DT Y+++ D++ K G Sbjct: 280 SAFISTCPYP-------VILCGDFNDTPASYTYFTIRGDLQDAFLRKGSGIGRTYAGLAP 332 Query: 221 -IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 +RID+I +++ + + SDH PVI Sbjct: 333 TLRIDYIFTDKSFK-------VNSFRKINSTLSDHYPVIA 365 >gi|281352921|gb|EFB28505.1| hypothetical protein PANDA_007799 [Ailuropoda melanoleuca] Length = 113 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 34/94 (36%), Gaps = 12/94 (12%) Query: 188 NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRG 247 + D R H YSF+ ++S RIDH++ S I Sbjct: 17 ELDLIDIYRTLHPRTKEYSFYSNAHGTFS-----RIDHVLGHKTGLSQYQKIEIIPCI-- 69 Query: 248 WTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 SDH + + L+ K ++S + ++ I Sbjct: 70 ---FSDHNALKLELN--HKEKPGRNSNTWRLRTI 98 >gi|84387306|ref|ZP_00990326.1| putative phospholipase C precursor [Vibrio splendidus 12B01] gi|84377755|gb|EAP94618.1| putative phospholipase C precursor [Vibrio splendidus 12B01] Length = 444 Score = 49.4 bits (116), Expect = 5e-04, Method: Composition-based stats. Identities = 38/285 (13%), Positives = 81/285 (28%), Gaps = 43/285 (15%) Query: 2 SVVTVATWNVNSIRA-------RIHNLAAWIKENNPDIICLQETKTE-DKNFPFETLQSL 53 + + V T+N+ ++ A R + ++K D++ LQE F E + Sbjct: 179 NTLKVMTYNIWALPAIASHIGDRYDLIPKYVK--GYDVLALQEVFANGRDEFLRELAKEY 236 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 Y + + N + + I N Sbjct: 237 PYQTKMLDKDGINIYDGGVIIVSRYPIVNEAQYVFPDCTGTDCFADKGVNYAEVIKNGQA 296 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 H + +D + R + ++ A I Y+ N Sbjct: 297 YHVFGTHTASFDTNTARDYRQ-------RQFKQMRQLAQSLEIPTSETVIYSGDFNVNK- 348 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYS--FWDYYADSWS-------KNKGIRID 224 ++A + Y+ +D ++++ +N +D Sbjct: 349 --------LKFPGDYQQMFANLQADEPEYSGYTASTFDPRINNFAGEPMSGGENVEY-LD 399 Query: 225 HIMLSPEATSLLHSA-RID------TKPRGWTKPSDHTPVIVSLD 262 ++++S E H+ R+D ++ SDH PV + Sbjct: 400 YVVVSSEYAQKTHNNNRVDVPRSTSSELWKHYNLSDHFPVSAVIK 444 >gi|324515144|gb|ADY46104.1| Neutral sphingomyelinase [Ascaris suum] Length = 426 Score = 49.4 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 38/268 (14%), Positives = 68/268 (25%), Gaps = 39/268 (14%) Query: 17 RIHNLAAWIKENNPDIICLQETKTED--KNFPFETLQSLNYHIETCGQKSYNGVAILSKY 74 R+ L + N DII LQE + Y + +GV I S++ Sbjct: 39 RLSKLCEALLSTNYDIISLQEIWSVRDFDRINSAIKDVYPYSYYFHSGFTGSGVCIFSRH 98 Query: 75 QPIEIVTHLPGDDLDVQARFIEATFTINTQTLR-----------IGNLYLPHGNPITSTK 123 + + H + F + + Sbjct: 99 AIVSTLMHRYSLNGFAHHIHRGDWFGGKVVGMVQLEIGTYRINFYATHLHAEYDRENDLY 158 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 ++S +F + I GD+N+ P + N + ++ Sbjct: 159 LPHRLSQAFELSQFVKHTSHAADLTILTGDFNLEPDDLGYRLIVDNAN-------LIDAW 211 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID- 242 N + + Y+ G R+D+IM + +D Sbjct: 212 LARPNKSGCETGMTCDRPDNCYT---ARNLKQPNPAGKRLDYIM------YKCGKSDVDL 262 Query: 243 --TKPRGWTKP-------SDHTPVIVSL 261 + R P SDH V Sbjct: 263 VMCENRLGRIPGDKQINYSDHLGVYADF 290 >gi|261408212|ref|YP_003244453.1| endonuclease/exonuclease/phosphatase [Paenibacillus sp. Y412MC10] gi|261284675|gb|ACX66646.1| Endonuclease/exonuclease/phosphatase [Paenibacillus sp. Y412MC10] Length = 494 Score = 49.4 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 37/287 (12%), Positives = 79/287 (27%), Gaps = 30/287 (10%) Query: 4 VTVATWNVNSIRARIHNLAAW----------IKENNPDIICLQETKTEDKNFPFETLQSL 53 + V ++N +R ++ W I E+ PD+I QE + Sbjct: 38 LKVMSFN---LRYAANDSQPWENRRPVTRNLILEHQPDVIGTQE--GLHRQIVDLENDLP 92 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 Y G++ + ++ + + +T L + + + ++ Sbjct: 93 GYDRIGVGREGGSLGEYMAIFYNTDRLTPLEQSHFWLSDTPQTISSASWGNQIPRMATWV 152 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + + + L S+ + + + Sbjct: 153 RFQDLRNGKTF----YMVNTHLDHQSEVSRQKSAALIVDKMKAFDPDIPVVITGDFNTLP 208 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 + L + T R D +++ D G RID I+ Sbjct: 209 GSDTYSIFTSNGLSDAHVTAKKRTNDDLGTFHNYKDPTGGG----SGNRIDWILHGQGW- 263 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 + + I PSDH PV++ +Q + T+ P Sbjct: 264 -NILHSEIINYKEDGQYPSDHYPVMME-----GTLQQSNKTTGETVP 304 >gi|126660414|ref|ZP_01731524.1| hypothetical protein CY0110_01310 [Cyanothece sp. CCY0110] gi|126618280|gb|EAZ89039.1| hypothetical protein CY0110_01310 [Cyanothece sp. CCY0110] Length = 125 Score = 49.4 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 22/63 (34%), Gaps = 17/63 (26%) Query: 217 KNKGIRIDHIMLSPEATSL------LHSARID-----------TKPRGWTKPSDHTPVIV 259 + G IDHI++S E + + ID R SDH P+ Sbjct: 61 RGNGELIDHILVSKELLPGNPPQTPVVDSHIDGLGSLPSISEQPSQRRGEPGSDHAPITA 120 Query: 260 SLD 262 + D Sbjct: 121 TFD 123 >gi|322805921|emb|CBZ03486.1| exodeoxyribonuclease III [Clostridium botulinum H04402 065] Length = 263 Score = 49.4 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 39/268 (14%), Positives = 79/268 (29%), Gaps = 13/268 (4%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYHI 57 + + T N +S + +I LA I ENN D+I LQE ++ + F+ ++ N+ Sbjct: 1 MKILTLNCHSWQEEKQLEKIKYLAKVIYENNYDVIALQEVSQSINSKILFDNIKEDNFAF 60 Query: 58 E-TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT-INTQTLRIGNLYLPH 115 + + I + L + + + + N + Sbjct: 61 ILIKELEKLGENRFKILWDFAHIGYDKYEEGLAILTKHLIKEKKSFYISKSKDKNFWKTR 120 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 Y++ + E + + Q C + NDA Sbjct: 121 KVIKCKIDYNNNPIYFYSCHLGWWDDEEEDFKFQANKLIEDLKQDETCILMGDYNNDAFL 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 + + L N D + + K +R+D I+ + Sbjct: 181 ---NNKGYDYLINKKLKDIYHLARSKDNGVTAIGDIDGWKGNTKNMRLDLILSNKNL--K 235 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + ++ SDH V ++I Sbjct: 236 VEYCKVIFNGIRKEIISDHFGVEAKIEI 263 >gi|260788648|ref|XP_002589361.1| hypothetical protein BRAFLDRAFT_218091 [Branchiostoma floridae] gi|229274538|gb|EEN45372.1| hypothetical protein BRAFLDRAFT_218091 [Branchiostoma floridae] Length = 275 Score = 49.4 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 34/258 (13%), Positives = 75/258 (29%), Gaps = 17/258 (6%) Query: 16 ARIHNLAAWIKENNPDIICLQETKTE--DKNFPFETLQSLNYHIETCGQKSYNGVAILSK 73 AR + + D++ LQE ++ + + L YH +G+ + S+ Sbjct: 24 ARFQAIGEELCTGRYDVVSLQEVWSQYVYEEMVSQVQDVLPYHHYFYSGWHGSGLCVFSR 83 Query: 74 YQPIEIVTHLPGDDLDVQARFIEATFTINT---QTLRIGNLYLPHGNPITSTKYDDKISW 130 Y I H + + +R + T T+Y+ + Sbjct: 84 YPIIGSHQHRFTLNGFPHKPHHPDWYGGKMAGLCQVRHPGAEINIYVTHTHTEYNHENDK 143 Query: 131 IKRFLRFASQRLELEEPLI-FAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNM 189 K + L D NI+ + + + ++ ++ Sbjct: 144 DKAHRVSQAFELSQFIRHTGQCADVNILAGDLNNQPFELGLKIIQSNTGMEDAWLTAEHR 203 Query: 190 GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM--LSPEATSLLHSAR--IDTKP 245 D+ + + ++ + Y R D+++ S + P Sbjct: 204 NAEDSGLTWNLDDNNFTCYPDYPPC-------RYDYVLYKGSARCRVKCVHCETTMHKVP 256 Query: 246 RGWTKPSDHTPVIVSLDI 263 SDH V+ L++ Sbjct: 257 GKPFNYSDHEGVVAHLEL 274 >gi|147834770|emb|CAN72707.1| hypothetical protein VITISV_043786 [Vitis vinifera] Length = 1372 Score = 49.4 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 28/240 (11%), Positives = 71/240 (29%), Gaps = 28/240 (11%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80 + + +++ D++C+QETK + ++SL + A + Sbjct: 186 IKSVVRKQKVDLVCIQETKIQA--MTDGVVKSLGVGRFLDWRTLEATGAAGGVLVCWDKR 243 Query: 81 THLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQ 140 + + + Q T+ T+ + N + + Sbjct: 244 SLDLLEWEEGQFSVSCKFRTVENGTVWVFTGVYGPFNKKDRECL---------WEELGAV 294 Query: 141 RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHD 200 R +P GD+N+ + + V + ++ + + Sbjct: 295 RGLWGDPWCVGGDFNVTLA----------QGERSRQGRVTSAMRRFAQVMDDLELIDLPL 344 Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 +++ + R+D +++P + T+ R SDH P+ + Sbjct: 345 QGGSFTW----SGGLYNQAWARLDRFLVAPRWLDQFSNV---TQKRLSRPISDHFPITIE 397 >gi|118462542|ref|YP_883226.1| endonuclease/exonuclease/phosphatase [Mycobacterium avium 104] gi|118163829|gb|ABK64726.1| endonuclease/exonuclease/phosphatase [Mycobacterium avium 104] Length = 252 Score = 49.4 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 32/267 (11%), Positives = 75/267 (28%), Gaps = 31/267 (11%) Query: 7 ATWNV-------NSIRARIHNLAAWIKENNPDIICLQET-----KTEDKNFPFETLQSLN 54 AT+N+ + + + L I+ +PD++ LQE ++E + +++ Sbjct: 2 ATFNILHGRTVGDGV--IVERLRDCIRRLDPDVLSLQEVDCDQPRSEHADLTGAAAEAMG 59 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 + ++ + + + Q LR+ + + Sbjct: 60 ----AVEHRFVAAISGTPGATWMAATGDEQPGTAAYGIALLSRYPVASWQVLRLPRIPMR 115 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 + + R A R + E + + +P + + + Sbjct: 116 FPMYLPGPNRVMIVDEEPRAAVIAQLRTPIGELTVANTHLSFVPGWNRRQLRRLIRDLRG 175 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 + + +F + N ++DHI+ Sbjct: 176 LPGPRLLTGDLNMTPQTVRRWSGMRALGNAKTFP-------ADNPNRQLDHILTDDR--- 225 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261 L A + SDH P++V L Sbjct: 226 RLRCAAVQADLM---PISDHRPLVVDL 249 >gi|226225952|ref|YP_002760058.1| hypothetical membrane protein [Gemmatimonas aurantiaca T-27] gi|226089143|dbj|BAH37588.1| hypothetical membrane protein [Gemmatimonas aurantiaca T-27] Length = 465 Score = 49.4 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 33/264 (12%), Positives = 62/264 (23%), Gaps = 20/264 (7%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + + N +L + P ++ QE E ++ Sbjct: 212 LRILSLNAQGGGVVQQHLDEMMAAYTPSVMAFQECGRELGQ-NLAKRAEWHFEQFHNLCL 270 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 P + A I T + NL+L Sbjct: 271 LSRWPVTQRDSMPRAAFARISDLGYGGAAIVIRYTIAHPAGPFELVNLHLETARKGLEGI 330 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD--CYNPIIWENDACFTLEVRQ 181 D+ + D + + Sbjct: 331 LGDQGLLRDDTGLPNVPASLETDRFAINADIRLRESERASYWSARHANTTPIVVVGDFNM 390 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI----RIDHIMLSPEATSLLH 237 + + A+ + D ++K++G RIDH++ +P+ Sbjct: 391 PVESSIFRAYWSALSSAFDAGG-------RGFGFTKHEGRWLRIRIDHVLFAPQWFET-S 442 Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261 A + G SDH PVI L Sbjct: 443 GAWV-----GNDVGSDHRPVIADL 461 >gi|322491121|emb|CBZ26386.1| endonuclease/exonuclease protein-like protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 736 Score = 49.4 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 7/43 (16%) Query: 4 VTVATWNVNS-------IRARIHNLAAWIKENNPDIICLQETK 39 + + +WNV IR ++ + + DIICLQE K Sbjct: 1 MFLISWNVAGWSSTSQAIRESFGSIHDFFACTDADIICLQECK 43 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 8/37 (21%), Positives = 17/37 (45%) Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 Y+ WD + +N+G R+D+I++ + Sbjct: 473 CPCPYTCWDQSRNRRLENEGTRLDYILVDSALLPAVV 509 >gi|149187109|ref|ZP_01865414.1| metal-dependent hydrolase [Erythrobacter sp. SD-21] gi|148829261|gb|EDL47707.1| metal-dependent hydrolase [Erythrobacter sp. SD-21] Length = 233 Score = 49.4 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 36/269 (13%), Positives = 69/269 (25%), Gaps = 50/269 (18%) Query: 4 VTVATWNVN---SI-RAR-IHNLAAWIKENNPDIICLQE----TKTEDKNFPFETLQSLN 54 +T A++N++ + R R + + + E + DII LQE + P + Sbjct: 3 LTFASYNIHKAVGLDRKRDPERILSVLHEIDADIIALQEADRRIGARESCLPRSEIDD-- 60 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 S ++ +E+ A + F ++ P Sbjct: 61 -----------------SHWRLVEVAKRPRSIGWHGNALLVRRNFEVHEGEALDLPTLEP 103 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 G + I S ++ G Sbjct: 104 RGAACGEITVEGHRLRIIGTHLDLSGLRRRDQIRSLVGFVE---------KCSRNLPTVI 154 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 + F+D S+ + +D I+ S Sbjct: 155 MGDFNQWGRATGAMREFSDRWLVVTPGR---SYPSRQPVAT-------LDRIVASKHWG- 203 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 A + + SDH PV+ +LD+ Sbjct: 204 -CVEAEVHHTGQSSV-ASDHLPVVATLDL 230 >gi|170755058|ref|YP_001781240.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum B1 str. Okra] gi|169120270|gb|ACA44106.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum B1 str. Okra] Length = 263 Score = 49.4 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 41/268 (15%), Positives = 81/268 (30%), Gaps = 13/268 (4%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYHI 57 + + T N +S + +I LA I ENN D+I LQE ++ + F+ ++ N+ Sbjct: 1 MKILTLNCHSWQEEKQLEKIKYLAKVIYENNYDVIALQEVSQSINSKILFDNIKEDNFAF 60 Query: 58 E-TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFI-EATFTINTQTLRIGNLYLPH 115 + + I + L + + + + + N + Sbjct: 61 ILIKELEKLGENRFKILWDFAHIGYDKYEEGLAILTKHSVKEKDSFYISKSKDKNFWKAR 120 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 Y +K + E + + Q C + NDA Sbjct: 121 KIIKCKIFYKNKPILVYSCHLGWWNDKEEDFKFQANKLIEDLKQDETCILMGDFNNDAFL 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 + + L N F D + + K +R+D I+ + Sbjct: 181 ---NYRGYDYLINKNFKDIYHLARSKDNGVTVIGDIDGWKGNTKNMRLDLILSNKNL--K 235 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + ++ SDH V ++I Sbjct: 236 VEYCKVIFNGIRKEIISDHFGVEAKIEI 263 >gi|147844821|emb|CAN79026.1| hypothetical protein VITISV_022897 [Vitis vinifera] Length = 1241 Score = 49.4 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 3/43 (6%) Query: 1 MSVVTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTE 41 M V + +WNV ++ + +I+ + D+IC+QETK + Sbjct: 933 MKV-KILSWNVRGANDSSKRKVIKTFIRNQSVDLICIQETKIQ 974 >gi|1196432|gb|AAA88037.1| unknown protein [Homo sapiens] Length = 1192 Score = 49.4 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 23/92 (25%), Positives = 33/92 (35%), Gaps = 12/92 (13%) Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR 246 D R H Y+F+ ++SK IDHI+ S S I T Sbjct: 90 HQADLIDIYRTLHPKSTEYTFFSAPHHTYSK-----IDHIVGSKALLSKCKRTEIITNYL 144 Query: 247 GWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278 SDH+ + + L I Q ST+ + Sbjct: 145 -----SDHSAIKLELRI--KNLTQSRSTTWKL 169 >gi|71017527|ref|XP_758994.1| hypothetical protein UM02847.1 [Ustilago maydis 521] gi|46098772|gb|EAK84005.1| hypothetical protein UM02847.1 [Ustilago maydis 521] Length = 525 Score = 49.4 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 54/359 (15%), Positives = 96/359 (26%), Gaps = 86/359 (23%) Query: 4 VTVATWNVNSIR-------ARIHNLAAWIKENN---PDIICLQETK--TEDKNFPFETLQ 51 +++ T NV ++ ARI +A+ + ++ D +CLQE + D F L Sbjct: 39 LSILTLNVWGLKYISKLRIARIKAIASRLASSDMPLYDFVCLQEIWYESRDWRFLKHALS 98 Query: 52 SLNYHI-ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT----- 105 S H +G+AILS++ +E TH + F Sbjct: 99 SRYPHSKFFYSGAFGSGLAILSRWNILETRTHPYSLNGQPIHVHHGDWFVGKACGSVTIN 158 Query: 106 ------LRIGNLYLPHGNPITSTKYDDKISWIKRFL--RFASQRLELEEPLIFAGDYNII 157 + + N + +Y + + ++ GD N Sbjct: 159 HPRLGLVDVWNTHFVAAGGEDGPEYKRSHRITQAYELAANCRNSASKGRHVVCVGDLNST 218 Query: 158 PQ-------PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL------ 204 P H + + E S + Sbjct: 219 PPSLAIGLLRHIGGLYDSFLDTRPQLPEHAVSLDPEETSTQVGDRATAAPDPQRAIEELG 278 Query: 205 -------YSFW-----DYYADSWSKNKGIRIDHIM-----------------LSPEATSL 235 ++ D A S+ G R+D+I +S Sbjct: 279 VTCDSPLNTWTAGKPLDERA---SRGAGKRLDYIFYRGPVDQQHSSESNASTVSSALAYS 335 Query: 236 ----------LHSARI---DTKPRGWTKPSDHTPVIVSLDI--PEPRKKQQDSTSQNMK 279 S+ + DT P SDH V + DI P ++ + + Sbjct: 336 ASHSTRGRLTCKSSSVVITDTIPEHLCSYSDHFGVASTFDILPPSSGAPSPTASDSDAR 394 >gi|150025222|ref|YP_001296048.1| hypothetical protein FP1150 [Flavobacterium psychrophilum JIP02/86] gi|149771763|emb|CAL43237.1| Protein of unknown function [Flavobacterium psychrophilum JIP02/86] Length = 348 Score = 49.4 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 45/273 (16%), Positives = 74/273 (27%), Gaps = 40/273 (14%) Query: 6 VATWNVNSIRARIHNLAAWI-------------KENNPDIICLQETKTEDKNFPFETLQS 52 V ++NV R+ NL WI ENNPD++C+QE + + Sbjct: 102 VMSYNV-----RLLNLFNWIPRDNVAQDILHFVNENNPDLLCIQEY-STSAKIDLKI--- 152 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 Y + K + + IV + I A I +R+ N++ Sbjct: 153 --YPYSSIVMKGKKIRTGQAIFSKFPIVNEGELAFPESNNNAIFADIKIGKDLVRVYNIH 210 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 L K ++ + + E I H Sbjct: 211 LQSIKISPDVKEINENVEGINKQKSQIIFNRISEAFKKQQQQGEIIMNHKKSCKYPIIIC 270 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL-YSFWDYYADSWSKNKGIRIDHIMLSPE 231 + D YSF Y A RID+I + + Sbjct: 271 GDMNNSAFSYVYRSIKGNMQDCFEQAGKGFGQTYSFKYYPA---------RIDYIFANSK 321 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 + + SDH P++ L + Sbjct: 322 M--RVKNFTNFPD----FVNSDHLPIMTRLSVD 348 >gi|298491351|ref|YP_003721528.1| endonuclease/exonuclease/phosphatase ['Nostoc azollae' 0708] gi|298233269|gb|ADI64405.1| Endonuclease/exonuclease/phosphatase ['Nostoc azollae' 0708] Length = 256 Score = 49.4 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 40/269 (14%), Positives = 77/269 (28%), Gaps = 29/269 (10%) Query: 4 VTV--ATWNVN------SIRARIHNLAAW---IKENNPDIICLQETKTEDKNFPFETLQS 52 + + ++N+ +R + A I+ PD+I QE KT + L Sbjct: 1 MKITVMSFNLRYDKPDSGVRQWEKRIGAIASVIQHYQPDLIGTQEGKTPQLSNLQALLPE 60 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 + + + + + +L F + ++ Sbjct: 61 YKF--------IGGDRTGTGEGEHCAVFYNPQRLELQQTKDFYLSDTPEIPGSITWDTRL 112 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 T + IS + + E ++ P + Y + + + Sbjct: 113 PRMATWANFTVGNPSISLTIVNTHLDHENAKARELGAALVILRLMEFPSEDYLLLTGDFN 172 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 A + L + AT +F ++ ++W ID I Sbjct: 173 AN---PTTLARMILADNYKIQDALATLPLDKQKTFHEFTGEAWDA-----IDTIYCDRRF 224 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + ID + PSDH PVIV L Sbjct: 225 --QIEQVIIDRQQWEDIWPSDHFPVIVKL 251 >gi|256074176|ref|XP_002573402.1| cript-related [Schistosoma mansoni] gi|238658581|emb|CAZ29634.1| cript-related [Schistosoma mansoni] Length = 427 Score = 49.4 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 36/282 (12%), Positives = 85/282 (30%), Gaps = 32/282 (11%) Query: 1 MSVVTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55 + ++ V +WN+ + R+ ++ IK+ ++CLQE E L+S Y Sbjct: 53 LPIINVLSWNIQGLELANLNKRMMSVVETIKKEEFHVVCLQEVILVCLEILREKLES-TY 111 Query: 56 HIETCGQKSYNG----VAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 HI + + V ++ K+ I++ T + +I+ + Sbjct: 112 HIFSASDHNSLWDYFVVILVKKHPDIKVDTDSVSIQPFPNSVMNRHLLSIDLNLSQFLPK 171 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 N T + + + + + + + + Sbjct: 172 SNLELNLRIFTAHLESCAEYSGERVTQLKSVWDTMSSYVNCGDSKASSNRGRASIFCGDL 231 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYA-DSWSKNKGI-------RI 223 + + + + + ++ ++ + +GI R Sbjct: 232 NLRDSEVCVLGGLPYGIHDVWNECGCRTEIRN--TWDPLRNQNARRQFRGIPRAHMTFRY 289 Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTK-------PSDHTPVI 258 D + + S + +D RG K PSDH ++ Sbjct: 290 DRMYV---LGSRIK--PVDFGLRGIEKVRNLSCLPSDHWAIL 326 >gi|325109514|ref|YP_004270582.1| endonuclease/exonuclease/phosphatase [Planctomyces brasiliensis DSM 5305] gi|324969782|gb|ADY60560.1| Endonuclease/exonuclease/phosphatase [Planctomyces brasiliensis DSM 5305] Length = 329 Score = 49.4 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 38/289 (13%), Positives = 77/289 (26%), Gaps = 33/289 (11%) Query: 4 VTVATWNVNSIR--------ARIHNLAAWIKENN--PDIICLQETKTEDKNFPFETLQSL 53 + V TWNV S R A I ++ + D+I L E + + Sbjct: 22 IKVLTWNVESNRDNRTTNNPAVIARKLKLLQSTSGPYDLIGLTEVAASSAGTYTDAFAAD 81 Query: 54 N--YHIETCGQKSYNGVAILSKYQPIEIVTH-------------LPGDDLDVQARFIEAT 98 Y + + + IL + I + PG Sbjct: 82 GLEYRAFLSASGNTDRMLILVRDDRFTIEGNRAEELQNDGGSILFPGGSARQPFVVTVTD 141 Query: 99 FTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP 158 + T R +L GN + + + R R + + + N+ Sbjct: 142 SKNDDLTFRFMVNHLNRGNSNSRQQQAKGLREWAR--RQTLPVVAVGDYNFDFDFRNLTG 199 Query: 159 QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYS---FWDYYADSW 215 P + + + + + ++ ++D D + Sbjct: 200 NPSMSMFMRLDPAERGLFVWNWIIPNATFTVDGATDVTRKIKLDVTFTDSNWYDPQRDGF 259 Query: 216 SKNKGIRIDHIMLSPEATSLLHSARIDT---KPRGWTKPSDHTPVIVSL 261 + +D I ++ A + + + SDH PV + Sbjct: 260 DDFRDSLLDFIFVAGPARNWAARSNVIQLPGDFPDNDHTSDHRPVDATF 308 >gi|34392566|dbj|BAC82613.1| pol-like protein [Danio rerio] Length = 1284 Score = 49.4 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 39/271 (14%), Positives = 84/271 (30%), Gaps = 41/271 (15%) Query: 6 VATWNVNS---IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + ++N IR + + K D+I LQET ++ + ++ Sbjct: 23 IVSFNARGLLDIR-KFEKVKEMCKRE--DVILLQETNWREE--CMKEIRKRWSGEMLYNN 77 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 ++ D + + + + + + N++ P Sbjct: 78 GDGRLGRGVAILLKENSGVLCKTIYNDKEGKCMICEMEYVKKKVIMVNVHAPTEENKKKE 137 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 Y+ L+ E +I GD+N + + ++++ D ++ Sbjct: 138 YYN-----------VLRDYLKKHERVIIMGDFNTVFSKLEMAEGMVFKTD----KGRKEL 182 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG-----IRIDHIMLSPEATSLLH 237 ++ M D R ++ YS + G RID I+ + Sbjct: 183 KILMEEMNLIDVWRERNEQTKEYS--------RRQIVGNFCCQTRIDFILCTRN-----V 229 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268 I+ T SDH P+ + LD ++ Sbjct: 230 EGFINKIKYEETSLSDHKPLFMKLDWSNVKR 260 >gi|270017092|gb|EFA13538.1| hypothetical protein TcasGA2_TC002170 [Tribolium castaneum] Length = 363 Score = 49.4 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 40/257 (15%), Positives = 68/257 (26%), Gaps = 49/257 (19%) Query: 9 WNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGV 68 WN NS++ +I L A++ NN DI+ + ETK P + NY+I + Sbjct: 10 WNANSVKQKIDELIAFLHSNNVDILAISETKLT----PNDRFYIQNYNIIRQDRVDGTNA 65 Query: 69 AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKI 128 A + ++ + + I N + + + Sbjct: 66 AGGVAILVKKGISFSKLTLPRTTIEAVGIKLANQIHFIAIYNRPYYNISQRDLENLN--- 122 Query: 129 SWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN 188 + +I AGD+N C+ N Sbjct: 123 --------------NIGNKVIIAGDFNATHNTRGCHRNNTSGNTIYNLSVSNNIIINHPR 168 Query: 189 MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGW 248 + T ID I+ D + Sbjct: 169 SPTHFPSNNSTPTV--------------------IDLILTKNFLLEN------DPQSLSQ 202 Query: 249 TKPSDHTPVIVSL-DIP 264 SDH PVI + ++P Sbjct: 203 LN-SDHNPVIFEISNLP 218 >gi|171913306|ref|ZP_02928776.1| hypothetical protein VspiD_19040 [Verrucomicrobium spinosum DSM 4136] Length = 299 Score = 49.4 bits (116), Expect = 6e-04, Method: Composition-based stats. Identities = 36/291 (12%), Positives = 70/291 (24%), Gaps = 51/291 (17%) Query: 8 TWNV-----------NSIRARIHNLAAWIKENNPDIICLQE-TKTEDKNFPFETLQSLNY 55 T+N+ N R +A+ I+ + D++ +QE + ++ + Sbjct: 24 TFNIRYDNPRDGENGNGWLQRAPVVASLIRFHRFDVLGIQEALHHQVEDLQRHLPAYAHA 83 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 A + + + + L + + + Sbjct: 84 GCGRDDGHEAGEFAAIFYRKDVFTLKDSGTFWLSPTPELPSIGWDAKFNRICTWVKLESN 143 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 T ++ R RL L + AG + + Sbjct: 144 KTHETLYVFNTHFDHHGTTARLEGARLILAKIREIAGGRPTVLTGDFNVDQTSESYRRIH 203 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 + + + A Y+ RIDHI + Sbjct: 204 DSQFLADGFETAEERYALNGTANGFKVTAYT-------------DRRIDHIFHTRGF--K 248 Query: 236 LHSARIDTK-----------------PRGWTK-------PSDHTPVIVSLD 262 + + T PR PSDH PV+V L+ Sbjct: 249 VLRYGVLTDSYRSPSGDAAETGSVAFPREMKFRNYLPRTPSDHFPVLVELE 299 >gi|301307682|ref|ZP_07213639.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 20_3] gi|300834356|gb|EFK64969.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 20_3] Length = 325 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 32/298 (10%), Positives = 74/298 (24%), Gaps = 43/298 (14%) Query: 4 VTVATWNV-NSI----RARIHNLAAWIKENNPDIICLQETKTEDKNF----------PFE 48 + + WN+ N + W+K+ +PDI C E ++ E Sbjct: 31 LRLLYWNIQNGMWCGQDDNYEKFTTWVKQQDPDI-C---VWCEAQSIYKNGTADPLDSQE 86 Query: 49 TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA-----TFTINT 103 N+ + + +++T + + E Sbjct: 87 RFLVDNWGVLAKRYGHPYWYIGGHRDNYPQVITSKYPIENIKKIIGEEPNQVVTHGAGWA 146 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 + + + ++ + + + + + I + Sbjct: 147 KIIVDEKVLNIVTLHTWPQQWAFRTEDQEASKAENGGDKYRRMEIEYICKHTIGTSTNAT 206 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK------ 217 + D + + + Y D A + Sbjct: 207 NEYWMMMGDFNSRNRTDNAIYRYPEDSPKFLTQDYIAQETPY--VDVIAKKYPNEFKTTT 264 Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWT-----------KPSDHTPVIVSLDIP 264 K RID++ + ++ A + T PSDH P+I+ D+ Sbjct: 265 GKEARIDYVYCTQPLFDIIQYADVITDEYTKPVRDPKELSNFWWPSDHRPIIIDFDLS 322 >gi|302383396|ref|YP_003819219.1| endonuclease/exonuclease/phosphatase [Brevundimonas subvibrioides ATCC 15264] gi|302194024|gb|ADL01596.1| Endonuclease/exonuclease/phosphatase [Brevundimonas subvibrioides ATCC 15264] Length = 245 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 5/40 (12%) Query: 4 VTVATWNVN---SI--RARIHNLAAWIKENNPDIICLQET 38 + + T+NV+ + R + + I E++PDI+CLQE Sbjct: 1 MRLLTYNVHRCVGVDRRLDVERIVGVIAEHDPDIVCLQEL 40 Score = 42.5 bits (98), Expect = 0.062, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 3/42 (7%) Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 IRIDH+ +SP + R P SDH P+IV + Sbjct: 203 IRIDHVFVSPHI--RVTGVRAAFSPLAR-MASDHLPLIVDFE 241 >gi|242827049|ref|XP_002488758.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500] gi|218712150|gb|EED11577.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500] Length = 951 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 19/56 (33%), Gaps = 3/56 (5%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278 ID + S + + + R W +DH P++ D+ R N Sbjct: 660 IDLVWASHNLANRVVNCD---TKREWWYGADHVPILTQFDLTAVRVPPMVRKQWNA 712 >gi|207723157|ref|YP_002253556.1| metal-dependent hydrolase protein [Ralstonia solanacearum MolK2] gi|206588351|emb|CAQ35314.1| metal-dependent hydrolase protein [Ralstonia solanacearum MolK2] Length = 289 Score = 49.0 bits (115), Expect = 6e-04, Method: Composition-based stats. Identities = 35/300 (11%), Positives = 77/300 (25%), Gaps = 52/300 (17%) Query: 1 MSVVTVATWNV------NSIRARIHNLAAWIKENNP-DIICLQETKTEDKNFP------- 46 M + + TWN+ + R + + A P DI+CLQE + + P Sbjct: 1 MGTI-ILTWNIQWGRGADG-RVDLPRMLAEAHAMGPFDILCLQEVTSGFGHLPGQPGDDQ 58 Query: 47 -FETLQSLNYHI----------ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFI 95 E +L + + G AI+++ + ++ H D Sbjct: 59 WRELAGALGHAFTLIDGIALERHEGTRIQRFGNAIVTRLPVLHVMRHALPCPADTSPTMP 118 Query: 96 EATFT-----------INTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL 144 + + L + + Sbjct: 119 RMAIEATVQAPFGPLRVISTHLEYYSETQRIAQIDALRALHVEGWMRVAHPPTLGPEPAD 178 Query: 145 EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL 204 A + + P ++ T + Sbjct: 179 GPFRPLAQTHATVICGDFNCKPDSTPKRLATVPFSHETATLYDAWEVAHGPAPQPPTFGV 238 Query: 205 Y--SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + + W A + D +++S + + ++ T+ SDH P+++ L+ Sbjct: 239 HDRTGWTEPAYA--------CDFMLISEPLKTRVARVEVN----SVTQASDHQPMLLELN 286 >gi|153009983|ref|YP_001371198.1| endonuclease/exonuclease/phosphatase [Ochrobactrum anthropi ATCC 49188] gi|151561871|gb|ABS15369.1| Endonuclease/exonuclease/phosphatase [Ochrobactrum anthropi ATCC 49188] Length = 337 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 41/270 (15%), Positives = 68/270 (25%), Gaps = 60/270 (22%) Query: 19 HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIE 78 + I PD+I Y + + + S + Sbjct: 118 KRILQMIAREKPDVI--------------------TYEEASDQWTKWLTILQGSYPYHLN 157 Query: 79 I--VTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 + G + + F E T + + G R+ Sbjct: 158 CADDPNTWGVGILSKRPFSEDAQTACVGDGLLAIAPINFGGTTVHVAALHFSWPWPRWQP 217 Query: 137 FASQRLELEEPL-----IFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191 + + +E E + AGD+N P + T L + Sbjct: 218 YQLRYIEPELQKLKGPLVVAGDFNAAPWSNAVRRVERASGTRHMTGIGGTWMTHLLPVKL 277 Query: 192 TDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP 251 Y G+ ID I++SPE SAR Sbjct: 278 A-----------PY-------------IGLPIDQILVSPEIGGAEVSAR-------EDAG 306 Query: 252 SDHTPVIVSLDIPEP--RKKQQDSTSQNMK 279 SDH PV + +P P +++ T M Sbjct: 307 SDHLPVRLDFSVPPPVRPDEEEPETQSVML 336 >gi|153941384|ref|YP_001390946.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum F str. Langeland] gi|152937280|gb|ABS42778.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum F str. Langeland] gi|295319008|gb|ADF99385.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum F str. 230613] Length = 263 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 40/268 (14%), Positives = 79/268 (29%), Gaps = 13/268 (4%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYHI 57 + + T N +S + +I LA I ENN D+I LQE ++ + F+ ++ N+ Sbjct: 1 MKILTLNCHSWQEEKQLEKIKYLAKVIYENNYDVIALQEVSQSINSKILFDNIKEDNFAF 60 Query: 58 E-TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT-INTQTLRIGNLYLPH 115 + + I + L + + + N + Sbjct: 61 ILIKELEKLGENRFKILWDFAHIGYDKYEEGLAILTKHPIKEKDSFYISKSKDKNFWKAR 120 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 Y +K + E + + Q C + NDA Sbjct: 121 KIIKCKIFYKNKPILVYSCHLGWWGDKEEDFKFQANKLIEDLKQDETCILMGDFNNDAFL 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 + + + N F D + + K +R+D I+ + Sbjct: 181 ---NNKGYDYIINNNFKDIYHLAKSKDNGVTVIGDIDGWKGNTKNMRLDLILSNKNL--K 235 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + ++ SDH V ++I Sbjct: 236 VEYCKVIFNGIRKEIISDHFGVEAKIEI 263 >gi|260460592|ref|ZP_05808843.1| Endonuclease/exonuclease/phosphatase [Mesorhizobium opportunistum WSM2075] gi|259033697|gb|EEW34957.1| Endonuclease/exonuclease/phosphatase [Mesorhizobium opportunistum WSM2075] Length = 305 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 38/311 (12%), Positives = 75/311 (24%), Gaps = 58/311 (18%) Query: 4 VTVATWNV------NSIR---ARIHNLAAWIKENNPDIICLQET--KTEDKNFPF--ETL 50 + + ++N+ + R +R + A DII LQE + NF E L Sbjct: 1 MKLVSYNIQYGFGSDG-RYDLSRAARIVA-----GADIIALQEVERHWQRSNFDDQPELL 54 Query: 51 QSL--NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108 L +YH + + + +TLR Sbjct: 55 SRLLPDYHWVYGPAFDMDASERRDGRLVNRRRQFGTMVLSKLPIAWSRLHALPMRRTLRP 114 Query: 109 GNLYLPHGNPITSTK--------------------YDDKISWIKRFLRFASQRLELEEPL 148 N + T + + Sbjct: 115 LNTRNAALECMIRTPAGPLRVLSLHLAHIAAEERLEQIDYLLAQHRRAPSEGGPWSGADD 174 Query: 149 IFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL---- 204 + ++ + IW D + + + + + Sbjct: 175 EPSRNWTSGEAEPENPLAAIWMGDFNMEPGSAEYRRIVGSTPYHRGAAYLDGFVDAAAVA 234 Query: 205 ------YSFWDYYADSWS---KNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHT 255 + D++ + K R+DH + + S D SDH Sbjct: 235 SEPVLDFHTRDFHTHVKTIDGKLTNRRLDHCFVGGMFAGRVRSVGADI----GEVASDHF 290 Query: 256 PVIVSLDIPEP 266 P+ + +D+ P Sbjct: 291 PLRIDIDLETP 301 >gi|254447779|ref|ZP_05061244.1| endonuclease/exonuclease/phosphatase family protein [gamma proteobacterium HTCC5015] gi|198262559|gb|EDY86839.1| endonuclease/exonuclease/phosphatase family protein [gamma proteobacterium HTCC5015] Length = 246 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 32/270 (11%), Positives = 69/270 (25%), Gaps = 34/270 (12%) Query: 4 VTVATWN------VNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57 + + T+N V + R +H++ ++ N DI+CLQE + ++ Sbjct: 1 MKLITYNMHKGFGVGNRRLVLHDMREALRAANADIVCLQEL----------QGEHHHHRN 50 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 + L+ + + I + + + Sbjct: 51 NHRHWPEEEQLEFLADSLWPHTAYGKNAVYQHGHHGNAILSRQPFSDWENINVSHRENAS 110 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + + + L E + + F Sbjct: 111 RSLLHGVIESNDGQRLHIICVHLGLFERERRRQIRQLSDR-IESHVPHHEALLIAGDFND 169 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYS---FWDYYADSWSKNKGIRIDHIMLSPEATS 234 ++ + L+ + + H S ++ +G +S A Sbjct: 170 WRQRCDRYLRQHSEVEEVFEAHLGKVAPSFPAWYPLLKVDRVYARG-------VSVNAVK 222 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 L + W SDH P+ V D P Sbjct: 223 RLTG-------QPWRGLSDHIPLSVEFDWP 245 >gi|325856403|ref|ZP_08172119.1| endonuclease/exonuclease/phosphatase family protein [Prevotella denticola CRIS 18C-A] gi|325483587|gb|EGC86559.1| endonuclease/exonuclease/phosphatase family protein [Prevotella denticola CRIS 18C-A] Length = 291 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 37/249 (14%), Positives = 68/249 (27%), Gaps = 18/249 (7%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQP 76 R L +I P + QE + L+ Y I + + Sbjct: 54 RCPQLCDFINFEQPAVFGTQEVLATQLRDLLQGLEGYAY-IGVGRDDGREEGEYAAIFYR 112 Query: 77 IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 +++ L + + + + +RI Y + Sbjct: 113 KDLLKLLDSGNFWLSQTPERPSLGWDAACIRICTWGKFEDKTTGKQFYFFNT-----HMD 167 Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIR 196 E + + + + D + S + + A + Sbjct: 168 HVGTVARRESTRLILQRIGQLAKSQPTILTGDFNVDQTDEIYGIFSRSGILRDCYAHARQ 227 Query: 197 ATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK----PS 252 T ++ D+ DS S RIDH+ +S + + I T K S Sbjct: 228 RMAPTG---TWNDFMQDSRSN---ARIDHVFVSSDFD--IQHYAIFTNSYWLGKSRRNIS 279 Query: 253 DHTPVIVSL 261 DH PV+V L Sbjct: 280 DHYPVMVKL 288 >gi|304392145|ref|ZP_07374087.1| endonuclease/exonuclease/phosphatase [Ahrensia sp. R2A130] gi|303296374|gb|EFL90732.1| endonuclease/exonuclease/phosphatase [Ahrensia sp. R2A130] Length = 380 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 44/317 (13%), Positives = 81/317 (25%), Gaps = 81/317 (25%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQ--------SLNY--------------------- 55 I + DIICLQE + E + L+Y Sbjct: 66 IADCRADIICLQEV---EDLATLEAFERNYLLPMTGLDYPQKEWRQGNDGRGIDVAIMAR 122 Query: 56 ---------HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 I + + +A L P I D + +E + + Sbjct: 123 EKTADGEEIEIRSVKSHAGRTMADLEVLTPRLIELGFEKDTRLFRRDCLEVNLKVGGKHF 182 Query: 107 RIGNLYLPHG----------NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI 156 + + + + + + + + GD N Sbjct: 183 TVFVAHFKSMGGPRGGLTGRDFTMPVRQAEAAGVKRIIEDRFGAERAADMRWMVCGDLND 242 Query: 157 IPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADS-- 214 + + E L + GF + ++ + S Sbjct: 243 YAARLAITGDKAAGHSFDWIAEETHGSAPLLDDGFAINLVDRRAQDDRWTLFYANGKSAS 302 Query: 215 ------WSKNKGIRIDHIMLSPEATSLLHSA-------------------RIDTKPR-GW 248 +++D+++ SP A ++ PR GW Sbjct: 303 ARLPQERPTRHLVQLDYLLASPRLAKGNAKAVPDIIRNGQPYRTVFPPDQEVERYPRTGW 362 Query: 249 TKP--SDHTPVIVSLDI 263 +P SDH PV+VSLD+ Sbjct: 363 DRPKASDHCPVVVSLDM 379 >gi|297678860|ref|XP_002817273.1| PREDICTED: sphingomyelin phosphodiesterase 2-like [Pongo abelii] Length = 423 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 42/297 (14%), Positives = 90/297 (30%), Gaps = 37/297 (12%) Query: 4 VTVATWNVNSI------RA-RIHNLAAWIKENNPDIICLQETKT-EDKNFPFETLQS-LN 54 + + N I RA R+ L ++ + + D+ L+E + +D + + L Sbjct: 9 LRIFNLNCWGIPYLSKHRADRMRRLGDFLNQESFDLALLEEVWSEQDFQYLRQKLSPTYP 68 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN---- 110 +G+ + SK+ E+ H+ + F+ L + + Sbjct: 69 AAHHFRSGIIGSGLCVFSKHPIQELTQHIYTLNGYPYMIHHGDWFSGKAVGLLVLHLSGM 128 Query: 111 -------LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 N +++ +F + + ++ GD N+ P+ C Sbjct: 129 VLNAYVTHLHAEYNRQKDIYLAHRVAQAWELAQFIHHTSKKADVVLLCGDLNMHPEDLGC 188 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223 W LE R + + G+RI Sbjct: 189 CLLKEWTGLRDAYLETRDFQGSEEGNTMVPKNCYVSQQEL---------KLFP--FGVRI 237 Query: 224 DHIMLSPEATSLLHSARID-----TKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTS 275 D+++ + S + P T SDH ++ +L + +Q S++ Sbjct: 238 DYVLY-KAVSGFYISCKSLETTTGNDPYSGTPLSDHEALMATLFVRHSPLQQNPSST 293 >gi|168182540|ref|ZP_02617204.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum Bf] gi|182674371|gb|EDT86332.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum Bf] Length = 263 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 41/268 (15%), Positives = 79/268 (29%), Gaps = 13/268 (4%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYHI 57 + + T N +S + +I LA I ENN D+I LQE ++ + F+ ++ N+ Sbjct: 1 MKILTLNCHSWQEEKQLEKIKYLAKVIYENNYDVIALQEVSQSINSKILFDNIKEDNFAF 60 Query: 58 E-TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ-TLRIGNLYLPH 115 + + I + L + + + N + Sbjct: 61 ILIKELEKLGENRFKILWDFAHIGYDKYEEGLAILTKHPIKEKDAFYISKSKDKNFWKAR 120 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 Y +K + E + + Q C + NDA Sbjct: 121 KIIKCKIFYKNKPILVYSCHLGWWDDKEEDFKFQANKLIEDLRQDEICILMGDFNNDAFL 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 + + L N F D + + K +R+D I+ + Sbjct: 181 ---NYRGYDYLINKNFKDIYHLAKSKDNGVTVIGDIDGWKGNTKDMRLDLILSNKNL--K 235 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + ++ SDH V ++I Sbjct: 236 VEYCKVIFNGIRKEIISDHFGVEAKIEI 263 >gi|307129015|ref|YP_003881031.1| Endonuclease/Exonuclease/phosphatase family protein [Dickeya dadantii 3937] gi|306526544|gb|ADM96474.1| Endonuclease/Exonuclease/phosphatase family protein [Dickeya dadantii 3937] Length = 380 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 39/268 (14%), Positives = 78/268 (29%), Gaps = 39/268 (14%) Query: 25 IKENNPDIICLQET------KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIE 78 IK N DI+C E + ++ + + I++ VA L++++ + Sbjct: 122 IKALNADILCAVEVENMAVLRDFNQQILADRAFAQYVMIDSPNDPRGIDVACLTRHRITQ 181 Query: 79 IVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFA 138 + TH+ + F + I + + + R A Sbjct: 182 LRTHIFDVSESFKPLFSRDCLE-----VTIDVGLPQPVHVLCNHFKSQNGRNDDERERAA 236 Query: 139 SQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT 198 +R E + + Q + + E+ A + F D Sbjct: 237 KRRRAQAERVAEIVRGYNLQQEYVVVMGDLNEDVANPWHSLAPLFSVPDLHPAIDPSL-- 294 Query: 199 HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT--------------- 243 Y++ Y++ + + ++D+I +S + I+ Sbjct: 295 -PETARYTY--YFSGGKAGERLNQLDYIFISTPLHQAKVTCGIERRGIYNIDKITAKEGA 351 Query: 244 -------KPRGWTKP-SDHTPVIVSLDI 263 W SDH V V LDI Sbjct: 352 EPVTPFPTVTSWDTAASDHAAVWVELDI 379 >gi|237794947|ref|YP_002862499.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum Ba4 str. 657] gi|229262666|gb|ACQ53699.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum Ba4 str. 657] Length = 263 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 41/268 (15%), Positives = 79/268 (29%), Gaps = 13/268 (4%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYHI 57 + + T N +S + +I LA I ENN D+I LQE ++ + F+ ++ N+ Sbjct: 1 MKILTLNCHSWQEEKQLEKIKYLAKVIYENNYDVIALQEVSQSINSKILFDNIKEDNFAF 60 Query: 58 E-TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ-TLRIGNLYLPH 115 + + I + L + + + N + Sbjct: 61 ILIKELEKLGENRFKILWDFAHIGYDKYEEGLAILTKHPIKEKDAFYISKSKDKNFWKAR 120 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 Y +K + E + + Q C + NDA Sbjct: 121 KIIKCKIFYKNKPILVYSCHLGWWDDKEEDFKFQANKLIEDLRQDEICILMGDFNNDAFL 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 + + L N F D + + K +R+D I+ + Sbjct: 181 ---NYRGYDYLINKNFKDIYHLAKSKDNGVTVIGDIDGWKGNTKNMRLDLILSNKNL--K 235 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + ++ SDH V ++I Sbjct: 236 VEYCKVIFNGIRKEIISDHFGVEAKIEI 263 >gi|330504967|ref|YP_004381836.1| endonuclease/exonuclease/phosphatase [Pseudomonas mendocina NK-01] gi|328919253|gb|AEB60084.1| endonuclease/exonuclease/phosphatase [Pseudomonas mendocina NK-01] Length = 363 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 43/316 (13%), Positives = 86/316 (27%), Gaps = 59/316 (18%) Query: 4 VTVATWNV---NSIR-----------------------ARIHNLAAWIKENNPDIICLQE 37 + V TWNV R ++ + ++ PD++ LQE Sbjct: 55 LKVMTWNVQYLAGKRYVFWYDLPSGDGPDERPSSEDLALTLNEVVRVLRAEQPDVVLLQE 114 Query: 38 T----KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR 93 K D LQ+ + C +++ A + I + L Sbjct: 115 LHDNAKASDHQDQLALLQARLGDLYPCSSQAFYWKAGFVPHPRILGSVGMKLGTLSRFQI 174 Query: 94 FIEATFTINT------------------QTLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135 + L I + + ++R + Sbjct: 175 ARAERLQLPMLEADPLSRQFQLKRALLVSYLPIRGGEELVAINTHFDAFAQGQNTMQRQV 234 Query: 136 RFASQRLEL----EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191 + L+ + + GD N++P + P + E++ ++ + Sbjct: 235 QMTDDLLQQLQGTGKTWVLGGDLNLLPPGQFQHLPEGQRSWYAADSELQDLARRYPMIPS 294 Query: 192 TDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP 251 + Y+ + ++ +D++ SP T L R Sbjct: 295 LQQASGA-EQAQWYTHSPNDPAAHGPDRT--LDYLFYSPRLTPLASQVRQHDTL----SI 347 Query: 252 SDHTPVIVSLDIPEPR 267 SDH PVI +P Sbjct: 348 SDHLPVIGRFFLPSQE 363 >gi|240172254|ref|ZP_04750913.1| hypothetical protein MkanA1_23264 [Mycobacterium kansasii ATCC 12478] Length = 260 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 36/269 (13%), Positives = 71/269 (26%), Gaps = 27/269 (10%) Query: 4 VTVATWNV-------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56 + VAT+N+ + + + L ++ +PD++ LQE + L + Sbjct: 1 MRVATFNILHGRTVGDGV--EVQRLCDCVRRIDPDVLALQEVDCDQPRSGRADLTAAAAE 58 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT-LRIGNLYLPH 115 + + T + + F + +R+ + Sbjct: 59 AMGAVAHRFVAAISGTPGATWMAATGDEQPGTAAYGIALLSRFPAASWQVVRLPRIPARF 118 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + + R A R L + + +P + + +D Sbjct: 119 PMYLPGPDKVMIVDEEPRAAVIARLRTPLGTLTVANTHLSFVPG-WNRWQLRRLAHDVRG 177 Query: 176 TLEVRQSFQKLQ-NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML-SPEAT 233 R L +F A +DHI+ P Sbjct: 178 FPWPRLLTGDLNLTPAAVRRWSRMRPLATAATF-PASAPDRQ------LDHILTDDPGLR 230 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 SA + SDH ++V LD Sbjct: 231 VGAASAELMP-------ISDHRALLVDLD 252 >gi|282877907|ref|ZP_06286716.1| endonuclease/exonuclease/phosphatase family protein [Prevotella buccalis ATCC 35310] gi|281299908|gb|EFA92268.1| endonuclease/exonuclease/phosphatase family protein [Prevotella buccalis ATCC 35310] Length = 283 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 39/282 (13%), Positives = 77/282 (27%), Gaps = 59/282 (20%) Query: 2 SVVTVATWNVNSIR-------------ARIHNLAAWIKENNPDIICLQE-----TKTEDK 43 + +TV ++N IR A + N+A +K+ N D++ LQE T+ + Sbjct: 40 NNLTVMSYN---IRHCSPYIGSGVPSPAEVGNVAKVLKDKNADVVLLQEVDSMTTRAFNI 96 Query: 44 NFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 + E + Y ++ + + + T + Sbjct: 97 DQAKELAKRAGYKYHKFFKQKDY-QGGAYGAAILSKYEMKNIINHPLPKMIDGQTIKGSN 155 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEP--LIFAGDYNIIPQPH 161 ++ I + S + + LE +I GD+N P Sbjct: 156 ILGSAKIVFAGKDIYIATMHLSVTESERLKQFPKYLECLEPYAHKLIIIGGDFNSRPTDA 215 Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI 221 T+ + ++ + Sbjct: 216 SITMLEAN------------------------GFTRTNKDPNKFTIPSDKPNRE------ 245 Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +D+I P + S + T SDH P++ L I Sbjct: 246 -LDYIAYKPSTAVDVVSHTVFTGI----NASDHLPIVSVLKI 282 >gi|156363326|ref|XP_001625996.1| predicted protein [Nematostella vectensis] gi|156212855|gb|EDO33896.1| predicted protein [Nematostella vectensis] Length = 277 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 36/266 (13%), Positives = 78/266 (29%), Gaps = 28/266 (10%) Query: 4 VTVATWNV-------NSIRARIHNLAAWIKENNPDIICLQETKTE-DKNFPFETLQSLNY 55 + + WNV N +A + + + DI+ + ET +++ Y Sbjct: 25 MRIGNWNVRTLYSSGNVAQAARE-----MGKRDIDIMGISETHWTGQGKMQLRDGETMVY 79 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 ++SK ++ P ++ +QARF + + Sbjct: 80 SGREDNIHREGVGILMSKNAAACLIEWTPWNERMIQARFYSRHIQLTIIHIY------AP 133 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 D+ + ++ L +Q + ++ Sbjct: 134 TEDADEHLKDEFYTRLQEVLDSRNQHDMVIITGDMNAKVGGQNWDYERVMGKHGLGVRND 193 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E L + T + H ++ D +KN+ IDH++++ + Sbjct: 194 NGERLCELCDLNELVITGTLFPHRTIHKA-TWIS--PDGKTKNQ---IDHVLVNKRFRNS 247 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 + R+ R SDH V + Sbjct: 248 VKDTRVF---RSADVGSDHYLVCATY 270 >gi|323344671|ref|ZP_08084895.1| endonuclease/exonuclease/phosphatase [Prevotella oralis ATCC 33269] gi|323093941|gb|EFZ36518.1| endonuclease/exonuclease/phosphatase [Prevotella oralis ATCC 33269] Length = 305 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 40/296 (13%), Positives = 77/296 (26%), Gaps = 62/296 (20%) Query: 8 TWNV-----------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY- 55 T+N+ N R + + PDI QE K + + L+ NY Sbjct: 26 TYNIRYDNDGDKKEGNGWERRWPIICDMLNFEEPDIFGTQEAKVNQIHDLQKGLEGYNYI 85 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + K A + + L+ + + + ++ + Sbjct: 86 GVGRDDGKEKGEYAAIFYKKDKLTKIRSGNFWLNETPDKPKLGWDAACIRICTWGEFMDN 145 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII------PQPHDCYNPIIW 169 + + ++ + I R S +L + + G + + I+ Sbjct: 146 KDKLKFYFFNLHMDHIGVVARRESAKLVIRKIKEITGGNAPVILTGDFNVDQNDEIFKIF 205 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 + + G + T RIDHI +S Sbjct: 206 SASGILKDSYSAAKMRFAENGTFNDFDTELKTE------------------SRIDHIFVS 247 Query: 230 PEATSLLHSARIDTKPRGWTK------------------------PSDHTPVIVSL 261 P+ + + T K PSDH PV+V + Sbjct: 248 PKF--NVKRYGVLTNGYWTEKGSKENLSSNKAPKELKFKKYARRTPSDHYPVLVKI 301 >gi|302546099|ref|ZP_07298441.1| endonuclease/exonuclease/phosphatase [Streptomyces hygroscopicus ATCC 53653] gi|302463717|gb|EFL26810.1| endonuclease/exonuclease/phosphatase [Streptomyces himastatinicus ATCC 53653] Length = 257 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 14/36 (38%), Positives = 24/36 (66%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQE 37 +VV V ++N+ S+R LA I+ +PD++C+QE Sbjct: 15 AVVRVLSYNIRSLRDDREALARVIRACDPDVVCVQE 50 >gi|126664651|ref|ZP_01735635.1| Metal-dependent hydrolase [Marinobacter sp. ELB17] gi|126630977|gb|EBA01591.1| Metal-dependent hydrolase [Marinobacter sp. ELB17] Length = 289 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 41/293 (13%), Positives = 84/293 (28%), Gaps = 63/293 (21%) Query: 4 VTVATWNVN-SI-------------------RARIHNLAAWIKE--NNPDIICLQETKTE 41 + + T+N+ I R+R NL I +N D+I LQE + Sbjct: 38 LRLLTFNIQVGISTSSYRHYLTRSWQHVLPHRSRFENL-DRIATLLSNYDVIALQE--CD 94 Query: 42 DKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI 101 + + + Y E G + + Q + L ++ + I Sbjct: 95 GGSLRSGHINQVQYLAEAAGIPYWYQQLNRNLGQFAQHSNGLLSRFRPLEVKEHRLPGLI 154 Query: 102 NTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161 + + + P + + ++ L + + Sbjct: 155 PGRGVIVAKYGNPEDPLLLVMMHLSLSKSAQQRQLGFVSDLISDYRHVVLMGDMNAHAEQ 214 Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI 221 N + + D SF + + Sbjct: 215 LLTNTPLKQTDLIPLPANAH------------------------SFPSWRPEKA------ 244 Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDST 274 +DHI++SP +HS+ + + P SDH P+ + + +P+P S+ Sbjct: 245 -LDHILVSPSL--QVHSSGVVSYP-----VSDHLPIALDITLPKPGATSPKSS 289 >gi|226948935|ref|YP_002804026.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum A2 str. Kyoto] gi|226842849|gb|ACO85515.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum A2 str. Kyoto] Length = 263 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 34/274 (12%), Positives = 74/274 (27%), Gaps = 25/274 (9%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYHI 57 + + T N +S + +I LA I ENN D+I LQE ++ + F+ ++ N+ Sbjct: 1 MKILTLNCHSWQEEKQLEKIKYLAKVIYENNYDVIALQEVSQSINSKILFDNIKEDNFAF 60 Query: 58 E-TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT-------QTLRIG 109 + + I + L + + + Sbjct: 61 ILIKELEKLGENRFKILWDFAHIGYDKYEEGLAILTKHPIKEKKSFYISKSKDKNFWKTR 120 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 + + + Y + ++ + + + D N Sbjct: 121 KIIKCKIDYNNNPIYFYSCHLGWWDDEEEDLKSQVNKLVQELKEKETCILMGDYNNDAFL 180 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 N L ++ D + K +R+D I+ + Sbjct: 181 NNKGYDYLINKKLKDIYHLARSKDNGVTAIGDIDGW---------KGNTKDMRLDLILSN 231 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + ++ SDH V ++I Sbjct: 232 KNL--KVEYCKVIFNGIRKEIISDHFGVEAKIEI 263 >gi|160884067|ref|ZP_02065070.1| hypothetical protein BACOVA_02043 [Bacteroides ovatus ATCC 8483] gi|299144720|ref|ZP_07037788.1| putative secreted protein [Bacteroides sp. 3_1_23] gi|156110409|gb|EDO12154.1| hypothetical protein BACOVA_02043 [Bacteroides ovatus ATCC 8483] gi|298515211|gb|EFI39092.1| putative secreted protein [Bacteroides sp. 3_1_23] Length = 260 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 39/271 (14%), Positives = 73/271 (26%), Gaps = 56/271 (20%) Query: 4 VTVATWNVNSIR----ARIHNLAAWIKENNPDIICLQET------KTEDKNFPFETLQSL 53 V V T+N +R A + LA IK PD + LQE K + + L Sbjct: 24 VRVMTYN---LRFGELASLEELAHHIKSFKPDFVALQEVDSKTDRKRTPHQKGKDFISEL 80 Query: 54 NYH--IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 YH + K+ + + ++ + + E + L Sbjct: 81 AYHTGMFGLYGKTIDYSTGYYGIGMLSKYPYISVQKIMLPHPVKEHERRAMLEGL-FEMG 139 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 T + + + ++ + P+I GD+N W Sbjct: 140 NDTIVFTSTHLDVNSQETRAEQIKFITGHFKNYKYPVILGGDFNARHYSEAIRGMDSWFA 199 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 + + ++ ID++ P+ Sbjct: 200 ASNDDFGMPAWKPVIK-----------------------------------IDYLFAYPQ 224 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + S + SDH P+I L+ Sbjct: 225 KGWRVISTQTVQSLL-----SDHLPIITELE 250 >gi|149198151|ref|ZP_01875198.1| hypothetical protein LNTAR_15857 [Lentisphaera araneosa HTCC2155] gi|149138753|gb|EDM27159.1| hypothetical protein LNTAR_15857 [Lentisphaera araneosa HTCC2155] Length = 336 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 39/280 (13%), Positives = 79/280 (28%), Gaps = 42/280 (15%) Query: 22 AAWIKENNPDIICLQET---KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIE 78 A I + + DI+ L E + D+ + ++Y ++ + + + + Sbjct: 60 ANVIAQIDADIVLLSELGHGDSLDELLKDLAERQVHYTFKSIVEGPDSLRRLCILAKFPP 119 Query: 79 IVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG-----------NPITSTKYDDK 127 + + P+ T Sbjct: 120 VKVDHRTRVKFKLKSEEVFVSRGFAYCIFEWQNSYKLHFIGAHLKSKIPTPLGQTDMRRY 179 Query: 128 ISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQ 187 + +L + E E +I AGD N A ++ + Sbjct: 180 EARQLHYLVDEILKKEPEANIIVAGDMNDTFDSSPIKEIQYRRYKA-----EKRLYDLRP 234 Query: 188 NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH-SARIDTKPR 246 + +D YS RID+ S S ++ + Sbjct: 235 YDKSHASWTHYYDKSDEYS---------------RIDYFFSSYAMLSEINYDTLVIPHSP 279 Query: 247 GWTKPSDHTPVIVSLDIPEPRKKQ------QDSTSQNMKP 280 W SDH P+++S PE + + +++T +N+KP Sbjct: 280 HWFIASDHRPMLLSFT-PENKDPKPALKLFENATRKNIKP 318 >gi|21218691|ref|NP_624470.1| secreted protein [Streptomyces coelicolor A3(2)] gi|5708245|emb|CAB52358.1| putative secreted protein [Streptomyces coelicolor A3(2)] Length = 279 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 78/259 (30%), Gaps = 60/259 (23%) Query: 18 IHNLAAWIKENNPDIICLQET------KTEDKNFPFETLQSLNYHIET------------ 59 + +A I+++ D++ LQE +++ + P E + L YH+ Sbjct: 58 LRRVANVIRKSGADVVGLQEVDKHYSARSDWADQPAELAELLGYHVVFGANIDNSPPAPG 117 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 + Y + T L Q + AT ++ + + N +L G+ Sbjct: 118 GHRVQYGTAILSRYPITASDNTWLYKSPGQEQRGLLHATLDVHGKKVEFYNTHLAAGSQA 177 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + + +P I GD+N +P + DA Sbjct: 178 DRLQQ----------TAQVVDLIGTRKPGILVGDFNALPAAPESRPLQNAYTDA------ 221 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + L G A T RID I + T L+ A Sbjct: 222 --WAKSLHARGDGATYPAQSPTE-------------------RIDLIYATRRVTPLV--A 258 Query: 240 RIDTKPRGWTKPSDHTPVI 258 ++ SDH P++ Sbjct: 259 QVLKD---DPAASDHRPLL 274 >gi|229820664|ref|YP_002882190.1| Endonuclease/exonuclease/phosphatase [Beutenbergia cavernae DSM 12333] gi|229566577|gb|ACQ80428.1| Endonuclease/exonuclease/phosphatase [Beutenbergia cavernae DSM 12333] Length = 269 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 36/237 (15%), Positives = 60/237 (25%), Gaps = 18/237 (7%) Query: 30 PDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSK--YQPIEIVTHLPGDD 87 PD++ LQE + Y G+ + G Sbjct: 44 PDVVGLQEV--QSHQLADLRADLPEYEAVGVGRDDGAAGGEHVPLLVRRAAWRIAEWGTF 101 Query: 88 LDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEP 147 + + + F T L + + +Q L Sbjct: 102 WLSETPAVPSRFAGTTFPRTCTWAVLEPVDGAGRAGSIGVWNVHLDHESTDAQAFGLRVV 161 Query: 148 LIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF 207 L + +P D + T T +F Sbjct: 162 LDAVRERGDVPAVVL--------GDLNAGPRTEPLAVVAGALHDARTRSRTAPTGPGGTF 213 Query: 208 WDYYADSWSKNKG---IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 D+ D+ + G RIDH+++S + + P PSDH PV+V L Sbjct: 214 HDWVPDAVADTAGDDDSRIDHVLVSDAVGVVAYDVP---VPGPGVVPSDHLPVVVDL 267 >gi|221042584|dbj|BAH12969.1| unnamed protein product [Homo sapiens] Length = 375 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 5/63 (7%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73 R N+ IK + D++CLQE ++ ++ E L+SL YH E + Sbjct: 31 RFPNILKEIKHFDADVLCLQEV--QEDHYGAEIRPSLESLGYHCEYKMRTGRKPDGCAIC 88 Query: 74 YQP 76 ++ Sbjct: 89 FKH 91 >gi|21218370|gb|AAM44053.1|AF510741_1 unknown [Homo sapiens] gi|55665689|emb|CAH71919.1| angel homolog 2 (Drosophila) [Homo sapiens] gi|119613774|gb|EAW93368.1| angel homolog 2 (Drosophila), isoform CRA_d [Homo sapiens] gi|119613775|gb|EAW93369.1| angel homolog 2 (Drosophila), isoform CRA_d [Homo sapiens] Length = 375 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 5/63 (7%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73 R N+ IK + D++CLQE ++ ++ E L+SL YH E + Sbjct: 31 RFPNILKEIKHFDADVLCLQEV--QEDHYGAEIRPSLESLGYHCEYKMRTGRKPDGCAIC 88 Query: 74 YQP 76 ++ Sbjct: 89 FKH 91 >gi|134300632|ref|YP_001114128.1| endonuclease/exonuclease/phosphatase [Desulfotomaculum reducens MI-1] gi|134053332|gb|ABO51303.1| Endonuclease/exonuclease/phosphatase [Desulfotomaculum reducens MI-1] Length = 244 Score = 49.0 bits (115), Expect = 7e-04, Method: Composition-based stats. Identities = 44/273 (16%), Positives = 77/273 (28%), Gaps = 59/273 (21%) Query: 1 MSVVTVATWNVNSIRAR--------IHNLAAWIKENNPDIICLQETKTEDKNFPFETL-- 50 MS + V ++N IR I +AA + +I LQE DK+ P Sbjct: 1 MSQIKVVSYN---IRHAQGMDGTIHIQRIAASLAHTKAQLIGLQEV---DKHMPRSHFIH 54 Query: 51 --QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108 ++L + N +++Y + + L++ Sbjct: 55 QAKTLGQLLNMHWVYGPNLDWGVAQYGNAILSYWPVLLYRQYMLPSKGEQRGLLEAVLQL 114 Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168 + + +++ + +K L + I GD+N P + Sbjct: 115 KHSKVSFFCTHLGLNQEERAAQVKEILNIIKKCCYP---CILVGDFNDGPTSKEHRLLTT 171 Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 DA G + ID+I + Sbjct: 172 ILKDAVGI------------QGSIKTFPSHKPQEQ-------------------IDYIFV 200 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 SPE I + T SDH PV ++L Sbjct: 201 SPEWK-------ILSASTYTTLASDHLPVQITL 226 >gi|326565908|gb|EGE16069.1| endonuclease/exonuclease/phosphatase [Moraxella catarrhalis 103P14B1] gi|326571929|gb|EGE21934.1| endonuclease/exonuclease/phosphatase [Moraxella catarrhalis BC8] gi|326577941|gb|EGE27805.1| endonuclease/exonuclease/phosphatase [Moraxella catarrhalis O35E] Length = 249 Score = 49.0 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 36/270 (13%), Positives = 70/270 (25%), Gaps = 39/270 (14%) Query: 1 MSVVTVATWNV-------NSIRARIHNLAAWIKENNPDIICLQETKTEDKN--FPFETLQ 51 M +T+ ++N+ N + R+ + + + NPDI+CLQE + ++ F Sbjct: 1 MKSITITSYNIHKGMSPTNRL-VRLMGMKDALLKTNPDILCLQEVQGQNLKRTIDFTEFP 59 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 H + + + L I Sbjct: 60 DGGQHEWFGEFLGIAS----------SYGKNAEYEHGHHGNAVLSRHPLDPKHNLNITVN 109 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 L + + D L L + + + I + Sbjct: 110 RLEKRGVLHCEVHPDGWRRPVVVLCCHLNLLHRDRIKQYQAIRDYIFTLPADASL----- 164 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY--SFWDYYADSWSKNKGIRIDHIMLS 229 S + Q + H Y +F + +D I + Sbjct: 165 -ILAGDFNDWSKKSCQALSSLGLSEVFLQVHGEYPATFPAKMPV-------LSLDRIYV- 215 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 +H+A + W+ SDH P+ Sbjct: 216 RRL--KVHNAMVHGGV-PWSNLSDHLPISA 242 >gi|308448585|ref|XP_003087692.1| hypothetical protein CRE_26029 [Caenorhabditis remanei] gi|308253595|gb|EFO97547.1| hypothetical protein CRE_26029 [Caenorhabditis remanei] Length = 740 Score = 49.0 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 37/286 (12%), Positives = 80/286 (27%), Gaps = 37/286 (12%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENN---PDIICLQETKTEDKNFPFETLQSLNYHIETC 60 + + T+N S+ A + LA ++E N DII L ETK Sbjct: 21 LRICTFNCRSV-ATDNRLAELLEETNRIKYDIIGLSETK----------------RSAEV 63 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + +G ++ + V+ G ++ I + + L + Sbjct: 64 HMTNRDGTGVILGKRNDSSVSGGVGFIINKSLMPKIKEIKIVSHRIGYITLQVNKNQCTI 123 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 Y + + + L + Y ++ + N+ Sbjct: 124 IQGYAPTADYEEEEHSNFYENL-EDVYKSCKSRYKMVIGDFNARIGERKGNEVFIGPHSM 182 Query: 181 QSFQKLQN----MGFTDAIRATHDTHHLYSF--WDYYADSWSKNKGIRIDHIMLSPEATS 234 + + + + + W Y + +DHI+ + Sbjct: 183 EKRNDSGERLATFCEVNRVFHMNSQFIKATHRRWTYISPDKQHRHE--LDHILANG---K 237 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 + + +T SDH + + I + K + + KP Sbjct: 238 YITDVSV---VPSFTNGSDHRMLRAKIHINAKQAKYEQV--KRRKP 278 >gi|218658684|ref|ZP_03514614.1| putative metal-dependent hydrolase protein [Rhizobium etli IE4771] Length = 216 Score = 49.0 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 34/251 (13%), Positives = 64/251 (25%), Gaps = 47/251 (18%) Query: 20 NLAAWIKENNPDIICLQETKT---------EDKNFPFETLQSLNYHIETCGQKSYNGVAI 70 +A+ I E DII LQE + ++H + G AI Sbjct: 1 RIASVIAEAGADIIALQEVDVLRRRTGGVDQAHLIASLLKMQAHFHPALSVAEEQYGDAI 60 Query: 71 LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISW 130 ++ + + + + + L + G + Sbjct: 61 ITALPTAAVKAGPLPSIGEQRGALSVEVLVGDRKLLVVNTHLGLRGRDR------IRQMT 114 Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG 190 + + P I GD+N IP DA + Sbjct: 115 TLLNSGWLRGTKDEPLPCILCGDFNAIPSSATYRLATRSLKDALLGGKAAP--------- 165 Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 + + +R+DHI ++ + + A + R Sbjct: 166 -RATFPSRYPL-------------------MRLDHIFVTDDLV--VKRATVLQN-RLTRV 202 Query: 251 PSDHTPVIVSL 261 SDH P+ + Sbjct: 203 ASDHLPLFAEI 213 >gi|281339730|gb|EFB15314.1| hypothetical protein PANDA_021504 [Ailuropoda melanoleuca] Length = 126 Score = 49.0 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 36/104 (34%), Gaps = 12/104 (11%) Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 E R L + D R H YSF+ ++S RIDH + S Sbjct: 20 ETRALNAILDELDLIDIYRTLHPRTKEYSFYSNAHGTFS-----RIDHALGHKTGLSQYQ 74 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 I SDH + + L+ K ++S + ++ I Sbjct: 75 KIEIIPCI-----FSDHNALKLELN--HKEKPGRNSNTWRLRTI 111 >gi|239831464|ref|ZP_04679793.1| endonuclease/exonuclease/phosphatase [Ochrobactrum intermedium LMG 3301] gi|239823731|gb|EEQ95299.1| endonuclease/exonuclease/phosphatase [Ochrobactrum intermedium LMG 3301] Length = 341 Score = 49.0 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 39/265 (14%), Positives = 69/265 (26%), Gaps = 50/265 (18%) Query: 19 HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIE 78 + I PD+I Y + + + S + Sbjct: 122 KRILQMIAREKPDVI--------------------TYEEASDQWSKWLTILQGSYPYHLN 161 Query: 79 I--VTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 + G + + F E T + + G R+ Sbjct: 162 CADDPNTWGVGILSKRPFSEEAQTACVGDGLLAIAPINFGGTTVHVAAIHFSWPWPRWQP 221 Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIR 196 + +E E + P ++A +E + L +G T Sbjct: 222 HQLRYIEPELQKL------NGPMIIAGDFNAAPWSNAVRRVEYASGTRHLTGIGGTWMTH 275 Query: 197 ATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTP 256 + Y G+ ID I++SPE S+R SDH P Sbjct: 276 LLPVSLSPY-------------IGLPIDQILVSPEIGGARVSSR-------EDAGSDHLP 315 Query: 257 VIVSLDIPEP--RKKQQDSTSQNMK 279 V + +P P +++ T M Sbjct: 316 VRLDFSVPPPVRPDEEEPETQSVML 340 >gi|28704050|gb|AAH47469.1| ANGEL2 protein [Homo sapiens] Length = 286 Score = 49.0 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 5/63 (7%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73 R N+ IK + D++CLQE ++ ++ E L+SL YH E + Sbjct: 31 RFPNILKEIKHFDADVLCLQEV--QEDHYGAEIRPSLESLGYHCEYKMRTGRKPDGCAIC 88 Query: 74 YQP 76 ++ Sbjct: 89 FKH 91 >gi|34392575|dbj|BAC82619.1| pol-like protein [Danio rerio] Length = 1197 Score = 49.0 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 34/258 (13%), Positives = 75/258 (29%), Gaps = 34/258 (13%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIK-ENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 M+ + + + NV + +++ I D+IC+QET ++ Sbjct: 1 MNNLCLVSINVRGLSSKVK-FENVIALTKKCDVICIQET---------------GWNENI 44 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPG-DDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + + + F + L I + Sbjct: 45 VNDLKKCWDGEILYNNDPNKKKGMAILIRRGIGYTFDVLFKDNYGRILTIKIMNKDEEIR 104 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 I + ++ F + S + +I GD+N + + D + +++ D Sbjct: 105 ICNIHAPNEDLERVTFFKDLSVLMSGWNNVIVLGDFNTVLERIDVDDHMVFRADVGRRE- 163 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN--KGIRIDHIMLSPEATSLL 236 ++ + D R + YS W K R+D+++ + S + Sbjct: 164 ---LKHMIEKHKYVDVWRERNRAKREYS-----RRQWVNTVLKQSRLDYVLCTRNVESFI 215 Query: 237 HSARIDTKPRGWTKPSDH 254 + SDH Sbjct: 216 SNIF-----YKIFSCSDH 228 >gi|254420344|ref|ZP_05034068.1| endonuclease/exonuclease/phosphatase family [Brevundimonas sp. BAL3] gi|196186521|gb|EDX81497.1| endonuclease/exonuclease/phosphatase family [Brevundimonas sp. BAL3] Length = 245 Score = 49.0 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 3/48 (6%) Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268 IRIDH +SPE + + D P SDH P+I+ +I +P + Sbjct: 201 IRIDHCFVSPEI--RITGVKADFSPLARV-ASDHLPLIIDFEIVQPSR 245 Score = 38.6 bits (88), Expect = 0.89, Method: Composition-based stats. Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 5/39 (12%) Query: 5 TVATWNVN---SI--RARIHNLAAWIKENNPDIICLQET 38 + T+NV+ R + + A I E+ DI+CLQE Sbjct: 3 RLLTYNVHRCVGTDKRLDVDRIVAVIGEHEADIVCLQEL 41 >gi|172060778|ref|YP_001808430.1| endonuclease/exonuclease/phosphatase [Burkholderia ambifaria MC40-6] gi|171993295|gb|ACB64214.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria MC40-6] Length = 284 Score = 49.0 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 10/39 (25%), Positives = 17/39 (43%), Gaps = 4/39 (10%) Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 D + ++ + ID R SDH PV++ +D Sbjct: 250 DFVFVTDTLLPRVTRCEIDGDVR----ASDHQPVVLEVD 284 >gi|302547749|ref|ZP_07300091.1| putative secreted protein [Streptomyces hygroscopicus ATCC 53653] gi|302465367|gb|EFL28460.1| putative secreted protein [Streptomyces himastatinicus ATCC 53653] Length = 182 Score = 49.0 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 19/44 (43%), Positives = 22/44 (50%), Gaps = 2/44 (4%) Query: 220 GIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 G RID I+ SP A IDT G PSDH PV L++ Sbjct: 141 GDRIDWILTSPGV--RTRYAAIDTYSSGGQFPSDHLPVHAVLEL 182 >gi|124359529|gb|ABD32574.2| Endonuclease/exonuclease/phosphatase [Medicago truncatula] Length = 521 Score = 49.0 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 32/270 (11%), Positives = 68/270 (25%), Gaps = 68/270 (25%) Query: 4 VTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 + + ++NV + RA + N I+E NP ++CLQE+K + Sbjct: 1 MKILSYNVRGLGSFEKRAEVRNF---IREKNPFVVCLQESKLS---------------MV 42 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + + +Y + G +E TI + + I + + + Sbjct: 43 DDYIINSIWGNVGCEYSYQASIGASGGLLTVWNPLLVEVWCTITFRYVLIIKVKVLSTDQ 102 Query: 119 ITSTKYDDKISWIKRFLRFASQ-----RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + + + GD+N + + + Sbjct: 103 DFIIANVYAPCDTLAKQDLWVRLSQFLTANGDVNVCVCGDFNYVRSEEERRGRNVVFRQV 162 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHL-YSFWDYYADSWSKNKGIRIDHIMLSPEA 232 N + +++ Y D Sbjct: 163 D---------ADNFNNFIDISFLIDLPICGRLFTW--YRGDGEQ---------------- 195 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 SDH P+++S+D Sbjct: 196 ------------VAYQRGLSDHVPLVLSVD 213 >gi|77461149|ref|YP_350656.1| endonuclease/exonuclease/phosphatase [Pseudomonas fluorescens Pf0-1] gi|77385152|gb|ABA76665.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1] Length = 375 Score = 49.0 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 44/309 (14%), Positives = 82/309 (26%), Gaps = 53/309 (17%) Query: 4 VTVATWNV---NSIRAR---------------------IHNLAAWIKENNPDIICLQET- 38 + V TWNV R + +A I++ PD++ LQE Sbjct: 70 LKVMTWNVQYLAGKRYVFWNDLAQGDDEAPTPEDMAFSLDEVARVIRDEQPDVVLLQELD 129 Query: 39 ---KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFI 95 K D + LQ + C +++ A I L Sbjct: 130 DGAKASDYQNQLKLLQERLTDLYPCSAHAFDWKADFVPDPHIFGSVGRQLATLSRYRIEH 189 Query: 96 EATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWI---KRFLRFASQRLELEEPLIFAG 152 + Q + + + +T + + + Sbjct: 190 AERLQLPVQPANFISRQFQPKDALLATTLPLSDGGQLVVFNTHLDRATQPDDTLQAQVTA 249 Query: 153 DYNIIPQPHDCYNPIIWENDACFTL---------EVRQSFQKLQNMGFTDAIRATHDTHH 203 ++ + P + D E R + + T++ Sbjct: 250 VAKVLDKHESHGTPWLIGGDFNLLPLGQYRRLPTEQRTPYSADSALHVLWDKYPMIPTNN 309 Query: 204 LYSFWDYYAD---SWSKNKGI----R-IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHT 255 S D A + + G+ R +D++ SP+ A + + SDH Sbjct: 310 EASGID-RAKWLTHYPNDPGLNGPDRTVDYLFYSPKIKR--VEATVRQD--DTLRISDHL 364 Query: 256 PVIVSLDIP 264 PVI +P Sbjct: 365 PVIAKFLLP 373 >gi|89072797|ref|ZP_01159354.1| hypothetical protein SKA34_04820 [Photobacterium sp. SKA34] gi|89051319|gb|EAR56774.1| hypothetical protein SKA34_04820 [Photobacterium sp. SKA34] Length = 647 Score = 49.0 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 45/295 (15%), Positives = 85/295 (28%), Gaps = 44/295 (14%) Query: 2 SVVTVATWNVNSI-----RARIHN----LAAWIKENNPDIICLQETKTEDKNFPFETLQS 52 + +T+ +N+ I A +A I+ D+ L E + K + Sbjct: 360 NSLTLMEFNIWGIDDRGTNAAPKYGSKYVAEVIENAGADVAVLTEGRLNAK----AVAEE 415 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 L ++ S ++S+++ I T + + + + Sbjct: 416 LGWYYVEHDDFSKYAPGVVSRFKIESIDT--TNSRTLSLKLHDKNFNRHYSLGVIHPSSS 473 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFAS---------------QRLELEEPLIFAGDYNII 157 + + + + + + GD+N + Sbjct: 474 ANYNSWDAAVTQAFNNELWTNIQNEEKESKLKVLNVVVDKLFINKDDKTSDLIVGDFNTV 533 Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL---YSF-WDYYAD 213 + + S + + +M F D+ R H Y++ W Y Sbjct: 534 MSGEFIKDSEFETIRTYAGQKFLMSSKLMDDMDFKDSYREVHPNVKEIPGYTYSWFYQQ- 592 Query: 214 SWSKNKGIRIDHIML--SPEATSLLH---SARIDTKPRGWTKPSDHTPVIVSLDI 263 K KG RIDHIM + L S P W SDH+ V+ I Sbjct: 593 --DKQKGGRIDHIMYRNNKNLKYKLKPINSYVTHYHPVTWV--SDHSAVVTKFKI 643 >gi|145297705|ref|YP_001140546.1| phospholipase C precursor [Aeromonas salmonicida subsp. salmonicida A449] gi|142850477|gb|ABO88798.1| putative phospholipase C precursor [Aeromonas salmonicida subsp. salmonicida A449] Length = 438 Score = 49.0 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 43/280 (15%), Positives = 85/280 (30%), Gaps = 43/280 (15%) Query: 2 SVVTVATWNVN-------SIRARIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSL 53 S + VA++NV SI R+ L ++K + + LQE + F + Sbjct: 172 SKLKVASYNVWALPVIASSIGERLTLLPDYLKGYDA--LLLQEVFDGRREGFLQALAKEY 229 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 Y + + N + ++ + Q + + T T + + Sbjct: 230 PYQTKVLDKPGVN------IHDGGVVIVSRYPIVREAQLVYPQCTGTDCFADKGVMYAEV 283 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 G + + ++++ + A I Y N Sbjct: 284 IKGG-KAWHLFATHTASFDTDEARQLRQIQFGQIRTLAASLKIPASDTVIYGGDFNVNKR 342 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYS--FWDYYADSWS-------KNKGIRID 224 F + + A + Y+ +D + ++ N +D Sbjct: 343 KFADDY---------ASMLANLDAHEPGYGGYTEATFDPRINPYAGGPLSGGANVEY-LD 392 Query: 225 HIMLSPE---ATSLLHSARIDTKPRGWTKP----SDHTPV 257 ++++S E A+ L+S I G P SDH PV Sbjct: 393 YLVVSREYGAASHNLNSVWIPRSSDGSLWPASNLSDHFPV 432 >gi|257458794|ref|ZP_05623917.1| putative endonuclease/exonuclease/phosphatase [Campylobacter gracilis RM3268] gi|257443782|gb|EEV18902.1| putative endonuclease/exonuclease/phosphatase [Campylobacter gracilis RM3268] Length = 453 Score = 49.0 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 38/283 (13%), Positives = 74/283 (26%), Gaps = 65/283 (22%) Query: 4 VTVATWNV----NSIR---------------------ARIHNLAAWIKENNPDIICLQET 38 + +A++NV + + ++ +A I N DI+ LQE Sbjct: 20 LKIASFNVQNLFDGVNDGTEYADFEIGRGGWSEQKYERKLQEIADEISALNADILGLQEI 79 Query: 39 KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT 98 E++ Q Y + + + + A Sbjct: 80 --ENEAVLKALAQKAGYKFYAFSRAQTAPAGVAVMSRIPIKFQKTYRPTELKTRDILRAD 137 Query: 99 FTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP 158 F + +++ S KR F + L+ + I AGD+N Sbjct: 138 FALGGTDFSFYVVHMLSARNPLS--------ERKRNFAFLREVLQGHQRAIVAGDFNT-- 187 Query: 159 QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN 218 + + + +H+ Sbjct: 188 ---NFGRNSLLNELIERDGFSDLWALHPCSQLKHFGSCESHE------------------ 226 Query: 219 KGIRIDHIMLSPEATSL----LHSARIDTKPRGWTKPSDHTPV 257 G +DHI+LS + S + + + SDH P+ Sbjct: 227 SGAVLDHILLSDDFFSNEPGYKKDSFV---VAKSSTASDHFPI 266 >gi|225458669|ref|XP_002282902.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 695 Score = 49.0 bits (115), Expect = 8e-04, Method: Composition-based stats. Identities = 28/251 (11%), Positives = 65/251 (25%), Gaps = 31/251 (12%) Query: 11 VNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAI 70 VN R R + + +++ D+ C+QETK + + V Sbjct: 99 VNESRKR-KVIKSVVRKQKVDLFCIQETKIQ---------------------LMFESVVR 136 Query: 71 LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISW 130 L + +G L + + Sbjct: 137 SLGSGRFLEWKALNACGSTGGMLICWDKRVLELLEWEVGQFSLSYRFKTLENGVIWAFTG 196 Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG 190 + + E+ G + +N + + + + + ++ + Sbjct: 197 VYGPFTRLEREGLWEKVGAIRGIWEGPWCLGGDFNITLAQGERNRQGRITSAMRRFAEVV 256 Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 + +++ + R+D ++SP R + Sbjct: 257 DDLGLVDIQLHGGAFTW----TGGLNNMSRARLDRFLVSPCWLDQFSRV----CQRRLPR 308 Query: 251 P-SDHTPVIVS 260 P SDH PV++ Sbjct: 309 PISDHFPVLLE 319 >gi|158297124|ref|XP_001689028.1| AGAP008053-PA [Anopheles gambiae str. PEST] gi|157015043|gb|EDO63591.1| AGAP008053-PA [Anopheles gambiae str. PEST] Length = 404 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 38/273 (13%), Positives = 81/273 (29%), Gaps = 18/273 (6%) Query: 4 VTVATWNVNSI------R-ARIHNLAAWIKENNPDIICLQETKT-EDKNFPFETLQS-LN 54 +++ T N+ I R R+ + + N DI+ LQE + D + + +++ L Sbjct: 3 LSILTLNIWGIPYVSKDRETRVKAIGDVLASGNYDIVSLQEVWSDSDYQYLKQRVENVLP 62 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL-RIGNLYL 113 + +G+AILS+Y + H + + F + +I Sbjct: 63 FCHYFYSGVVGSGLAILSRYPIVAAFFHAWSVNGYIHRIQHGDWFGGKGVGMAKISVNDQ 122 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + + Q + + + +++ N + Sbjct: 123 LVHVYVAHLHAEYNRQCDDYMAHRVIQAHDTAQFIESTRGQSVLQVLAGDLNTEPGDLAY 182 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM--LSPE 231 + + + + Y+ + G RID+I+ + Sbjct: 183 RVLVTSSKLKDSYDRKSIGSGVGTNECHTNSYT---DPLAAKQLPNGKRIDYILYRIGDH 239 Query: 232 ATSLLHSARI---DTKPRGWTKPSDHTPVIVSL 261 L R+ + P SDH V L Sbjct: 240 YEGRLLEHRLPLPERVPGQTFSYSDHEAVYAKL 272 >gi|125536384|gb|EAY82872.1| hypothetical protein OsI_38085 [Oryza sativa Indica Group] Length = 498 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 39/294 (13%), Positives = 78/294 (26%), Gaps = 52/294 (17%) Query: 2 SVVTVATWNVNS------IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55 + T+NV R R+ L IK +NPD+IC QE Y Sbjct: 227 KTFKIMTYNVWFHEDLELCR-RMDALGDLIKNHNPDLICFQEV------------TPNIY 273 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + LS ++ + F F+ + + ++ Sbjct: 274 LLLQKSDWWQEYRCSLSNSMAMQRKYYCMQMSKLPVESFDCTPFSNSIMGRELCVAHVKT 333 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP-IIWENDAC 174 G + + Q E I+ + + +D Sbjct: 334 GGAVKLVLATSHLESPMPGPPTWDQMYSTERVAQANKSLKILGSFRNVIFCGDMNWDDKG 393 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI--RIDHIMLSPEA 232 + G+TDA +++ S N+ + R+D + + Sbjct: 394 DGPFPLPA-------GWTDAWIELKPGEDGWTYDTKANSMLSANRKLQKRLDRFVC--KL 444 Query: 233 TS------------------LLHSARIDTKPRGWT---KPSDHTPVIVSLDIPE 265 + ++ + R PSDH +++S+ + Sbjct: 445 ADFKINSIQMIGKNAIPGLSYVKEKKVRKEVRKLELPVLPSDHFGLVLSITLES 498 >gi|77555100|gb|ABA97896.1| Endonuclease/Exonuclease/phosphatase family protein, expressed [Oryza sativa Japonica Group] Length = 498 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 39/294 (13%), Positives = 78/294 (26%), Gaps = 52/294 (17%) Query: 2 SVVTVATWNVNS------IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55 + T+NV R R+ L IK +NPD+IC QE Y Sbjct: 227 KTFKIMTYNVWFHEDLELCR-RMDALGDLIKNHNPDLICFQEV------------TPNIY 273 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + LS ++ + F F+ + + ++ Sbjct: 274 LLLQKSDWWQEYRCSLSNSMAMQRKYYCMQMSKLPVESFDCTPFSNSIMGRELCVAHVKT 333 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP-IIWENDAC 174 G + + Q E I+ + + +D Sbjct: 334 GGAVKLVLATSHLESPMPGPPTWDQMYSTERVAQANKSLKILGSFRNVIFCGDMNWDDKG 393 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI--RIDHIMLSPEA 232 + G+TDA +++ S N+ + R+D + + Sbjct: 394 DGPFPLPA-------GWTDAWIELKPGEDGWTYDTKANSMLSANRKLQKRLDRFVC--KL 444 Query: 233 TS------------------LLHSARIDTKPRGWT---KPSDHTPVIVSLDIPE 265 + ++ + R PSDH +++S+ + Sbjct: 445 ADFKINNIQMIGKNAIPGLSYVKEKKVRKEVRKLELPVLPSDHFGLVLSITLES 498 >gi|260061391|ref|YP_003194471.1| hypothetical protein RB2501_07320 [Robiginitalea biformata HTCC2501] gi|88785523|gb|EAR16692.1| hypothetical protein RB2501_07320 [Robiginitalea biformata HTCC2501] Length = 255 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 45/280 (16%), Positives = 78/280 (27%), Gaps = 46/280 (16%) Query: 7 ATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57 ++N+ +S R L A I + PD++ QE + Y Sbjct: 1 MSYNIRYDNPGDGRDSWDQRKEFLIAQIAYHAPDVVGTQE--GLLHQLRDMEVALEGYAF 58 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL-------RIGN 110 G+ + + L ++ + E L R + Sbjct: 59 FGKGRDQGDDQGEHTAVFYNTGQLELLEEETFWLSETPEVPSKGWDAALNRVCTYGRFRH 118 Query: 111 LYLPHGNPITSTKYDDKISWIKRFL-----RFASQRLELEEPLIFAGDYNIIPQPHDCYN 165 + +T +D +R R ++ P++ GD N+ P Sbjct: 119 RPSGREFYLFNTHFDHVGEAARRESVSLILRQMARVNAAGLPVVLMGDLNLEPDSAPIRQ 178 Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225 +DA + G + T RID+ Sbjct: 179 LANSMDDA----FDQAGQAAYGPPGTFNGFDCTQPVT------------------RRIDY 216 Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 I P + S I ++ G PSDH PV+ L+ E Sbjct: 217 IFTGPGDF-TVRSHAILSEFTGLGFPSDHFPVLARLEFSE 255 >gi|83858654|ref|ZP_00952176.1| hypothetical protein OA2633_04106 [Oceanicaulis alexandrii HTCC2633] gi|83853477|gb|EAP91329.1| hypothetical protein OA2633_04106 [Oceanicaulis alexandrii HTCC2633] Length = 324 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 27/255 (10%), Positives = 59/255 (23%), Gaps = 51/255 (20%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + ++N+ ++ A+++E + D++ LQE + P ++ Y Sbjct: 113 LRLISFNMWNLNRDPDAAIAFLREGDFDVVFLQEVGGALRGVPASLQETYPYQQRCRWGA 172 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 + L + G D LR+ + + + Sbjct: 173 AVISRLPLLE----------RGCDPYETVPVAFIEIEFQGAPLRLTSTHFARPTRPDLYQ 222 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 Y + ++ + + + + R Sbjct: 223 YHREQLGELITDHAHQSQILAGDFNTAENGFQMRLLADALAPLERITHGLRTWPSERVLP 282 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + IDHI +S + A Sbjct: 283 LPVIG----------------------------------IDHIWVSEGLCASYTGA---- 304 Query: 244 KPRGWTKPSDHTPVI 258 SDH PV Sbjct: 305 ---AADAGSDHRPVF 316 >gi|322505842|emb|CBZ14872.1| endonuclease/exonuclease protein-like protein [Leishmania braziliensis MHOM/BR/75/M2904] Length = 745 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 9/37 (24%), Positives = 17/37 (45%) Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 Y+ WD + +N+G RID+I++ + Sbjct: 484 CPCPYTCWDQSRNRRLENEGTRIDYILVDSALLPAVV 520 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 7/43 (16%) Query: 4 VTVATWNVNS-------IRARIHNLAAWIKENNPDIICLQETK 39 + + +WNV IR ++ + DIICLQE K Sbjct: 1 MFLISWNVAGWSSTSQAIRESFGSIHDFFACTEADIICLQECK 43 >gi|237717287|ref|ZP_04547768.1| metallophosphoesterase [Bacteroides sp. D1] gi|237719038|ref|ZP_04549519.1| metallophosphoesterase [Bacteroides sp. 2_2_4] gi|262406053|ref|ZP_06082603.1| metallophosphoesterase [Bacteroides sp. 2_1_22] gi|293371916|ref|ZP_06618320.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CMC 3f] gi|294648117|ref|ZP_06725660.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CC 2a] gi|294806860|ref|ZP_06765685.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides xylanisolvens SD CC 1b] gi|298480123|ref|ZP_06998322.1| secreted protein [Bacteroides sp. D22] gi|229443270|gb|EEO49061.1| metallophosphoesterase [Bacteroides sp. D1] gi|229451816|gb|EEO57607.1| metallophosphoesterase [Bacteroides sp. 2_2_4] gi|262356928|gb|EEZ06018.1| metallophosphoesterase [Bacteroides sp. 2_1_22] gi|292633162|gb|EFF51739.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CMC 3f] gi|292636501|gb|EFF54976.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CC 2a] gi|294445889|gb|EFG14531.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides xylanisolvens SD CC 1b] gi|295085514|emb|CBK67037.1| Metal-dependent hydrolase [Bacteroides xylanisolvens XB1A] gi|298273932|gb|EFI15494.1| secreted protein [Bacteroides sp. D22] Length = 263 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 39/271 (14%), Positives = 73/271 (26%), Gaps = 56/271 (20%) Query: 4 VTVATWNVNSIR----ARIHNLAAWIKENNPDIICLQET------KTEDKNFPFETLQSL 53 V V T+N +R A + LA IK PD + LQE K + + L Sbjct: 27 VRVMTYN---LRFGELASLEELAHHIKSFKPDFVALQEVDSKTDRKRTPHQKGKDFISEL 83 Query: 54 NYH--IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 YH + K+ + + ++ + + E + L Sbjct: 84 AYHTGMFGLYGKTIDYSTGYYGIGMLSKYPYISVQKIMLPHPVKEHERRAMLEGL-FEMG 142 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 T + + + ++ + P+I GD+N W Sbjct: 143 NDTIVFTSTHLDVNSQETRAEQIKFITGHFKNYKYPVILGGDFNARHYSEAIRGMDSWFA 202 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 + + ++ ID++ P+ Sbjct: 203 ASNDDFGMPAWKPVIK-----------------------------------IDYLFAYPQ 227 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + S + SDH P+I L+ Sbjct: 228 KGWRVISTQTVQSLL-----SDHLPIITELE 253 >gi|51092216|gb|AAT94521.1| GH03334p [Drosophila melanogaster] Length = 526 Score = 48.6 bits (114), Expect = 8e-04, Method: Composition-based stats. Identities = 38/270 (14%), Positives = 78/270 (28%), Gaps = 32/270 (11%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETCGQKSYNGVAILSKYQPIEIVTH 82 I +N PD+ICLQE + F L S NY + + I Sbjct: 235 ILQNQPDVICLQEV--DHFKFLQTVLGSQNYAGIFFPKPDSPCLYIEQNNGPDGCAIFYK 292 Query: 83 LPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK------------YDDKISW 130 L I + + + + I + + Sbjct: 293 RDKLQLQGYDTRILEVWRVQSNQVAIAARLRMRSSGREFCVATTHLKARHGALLAKLRNE 352 Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE----NDACFTLEVRQSFQKL 186 R L ++ + PL+ GD+N P + + A +++ + Sbjct: 353 QGRDLIRFVKQFAGDTPLLLCGDFNAEPVEPIYATILGCDLLRLGSAYADVKLDREEILH 412 Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR 246 N + + + Y+ W + + ID++ +P+ + + Sbjct: 413 PNADVGEFVAKSMKREPPYTTWKIREEGEECHT---IDYVFYTPD-RLKIKNCLYFPAGE 468 Query: 247 --------GWTKPSDHTPVIVSLDIPEPRK 268 + PSDH ++ ++ P + Sbjct: 469 QIGKNRTPSFQYPSDHFSLVCDFELLPPTE 498 >gi|313205315|ref|YP_004043972.1| endonuclease/exonuclease/phosphatase [Paludibacter propionicigenes WB4] gi|312444631|gb|ADQ80987.1| Endonuclease/exonuclease/phosphatase [Paludibacter propionicigenes WB4] Length = 369 Score = 48.6 bits (114), Expect = 9e-04, Method: Composition-based stats. Identities = 29/251 (11%), Positives = 57/251 (22%), Gaps = 16/251 (6%) Query: 19 HNLAAWIKENNPDIICLQE--TKTEDKNFPFE----TLQSLNYHIETCGQKSYNGVAILS 72 + + + ++N DIICLQE ++ E Y QK+ + + Sbjct: 126 NKVIQYAIDSNADIICLQEFTVSGSNEYLTMEDINKAFAKYPYKHIQFRQKNSKENGVAT 185 Query: 73 KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIK 132 + + + I N + K+ Sbjct: 186 FSKFPIVSKQKINYPSAYNNSILSDININGKIVRVINNHLESNRLTEYDKAMPAKLKNNW 245 Query: 133 RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192 + L A + + Sbjct: 246 DTNKLTRVTRHFTNKLGSAFKIRAVQADTVAGVIANSPYKVIVCGDFNDVPSSYTYTKVK 305 Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPS 252 +++ W + + RID++ P + I S Sbjct: 306 GSLKDAFAETGTGLGWTFN----ERYYHFRIDYVFFDP------TAYSIIDYKTDKVNYS 355 Query: 253 DHTPVIVSLDI 263 DH PV+ + I Sbjct: 356 DHYPVLCQIKI 366 >gi|297539130|ref|YP_003674899.1| Endonuclease/exonuclease/phosphatase [Methylotenera sp. 301] gi|297258477|gb|ADI30322.1| Endonuclease/exonuclease/phosphatase [Methylotenera sp. 301] Length = 250 Score = 48.6 bits (114), Expect = 9e-04, Method: Composition-based stats. Identities = 42/282 (14%), Positives = 83/282 (29%), Gaps = 59/282 (20%) Query: 2 SVVTVATWNVN-SI---RAR--IHNLAAWIKENNPDIICLQE-----TKTED-------- 42 + + +AT+N++ AR +H +++ D+I LQE TK + Sbjct: 3 NTLRIATFNIHKGFTHFNARFSLHLQRDMLRKLQADVIFLQEVQDVHTKHTERFASMSTS 62 Query: 43 ---KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF 99 + E +Y + ++G A+LSK+ I+ Q + Sbjct: 63 GQMEFLADEVWSDYSYGKNSVYPAGHHGNAVLSKFPIIKTNNQDISAHATEQRGMLHCEI 122 Query: 100 TINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159 I T + + + G + + + Q + PLI AGD+N Sbjct: 123 NIPTWDEPLHAVCVHLGLFAQWRRQQ-----LVSVSEYIEQHIPANAPLIIAGDFND--- 174 Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK 219 + + + A Sbjct: 175 ------WGMRTGRIFAERLNMHEVFEHHAGKPAKSFPAWLPM------------------ 210 Query: 220 GIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +R+D I + + + + + K SDH + +L Sbjct: 211 -LRLDRIYVRGF---NVKHVEVHSGA-HFLKVSDHAILTATL 247 >gi|300311792|ref|YP_003775884.1| metal-dependent hydrolase [Herbaspirillum seropedicae SmR1] gi|300074577|gb|ADJ63976.1| metal-dependent hydrolase protein [Herbaspirillum seropedicae SmR1] Length = 260 Score = 48.6 bits (114), Expect = 9e-04, Method: Composition-based stats. Identities = 45/264 (17%), Positives = 81/264 (30%), Gaps = 47/264 (17%) Query: 4 VTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 +TVAT+N++ R +AA + E D++ LQE L Sbjct: 36 LTVATYNIHGAVGTDGRFAPERVAAVLDELQADVVALQEV-------------PLG---- 78 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + V +L+ + + G ++ AR L ++ L G+ Sbjct: 79 -----GADQVDVLALLRAHTGMFAAEGPTMESPARRYGNAVLSRYPILATESIDLSFGSR 133 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 D I + LR + L L+ A ++ P+I D Sbjct: 134 EPRGALDADIDCRGQLLRVVATHLGLKPAERRAQIKRLLQAFDTNDAPVILLGDV----- 188 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLY-SFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 + F + + + + S W +A +D I +SP L Sbjct: 189 -NEWFMWGRTLRWLVGHFEAAPAPPTFPSRWPVFA----------LDRIWISPR--RRLQ 235 Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261 + SDH P++ + Sbjct: 236 HLAVHRSALARV-ASDHLPLLAHI 258 >gi|170595251|ref|XP_001902307.1| Endonuclease/Exonuclease/phosphatase family protein [Brugia malayi] gi|158590094|gb|EDP28850.1| Endonuclease/Exonuclease/phosphatase family protein [Brugia malayi] Length = 391 Score = 48.6 bits (114), Expect = 9e-04, Method: Composition-based stats. Identities = 39/290 (13%), Positives = 76/290 (26%), Gaps = 29/290 (10%) Query: 3 VVTVATWNVNSI------RA-----RIHNLAAWIKENNPDIICLQETKTEDK--NFPFET 49 ++ V + N ++ R+ RI + + +N DI+ L+E E Sbjct: 4 ILRVVSLNCWALPLPWPFRSSDHALRIKKIGEALLQNEYDIVALEEVWGEGDFLRLQKAL 63 Query: 50 LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT---QTL 106 Y + +G+ + S++ + + H + F + Sbjct: 64 KDVYAYSYYFHSGFTGSGICVFSRHPIVSTLMHRFTLNGFAHHIHRGDWFGGKGVGLVEI 123 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 I + +YD + L +I P Sbjct: 124 EIEQYRINFYAAHLHAEYDPNKDLYLPHRLAQAFELAQFVKHTSYSADALILAGDFNIEP 183 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK---GIRI 223 + + D + Y+ KNK G R+ Sbjct: 184 DNLAYQLIMKNANLRDAWIQKPNSCDDCGATFGRLDNCYT------PQRLKNKKCYGKRL 237 Query: 224 DHIML-SPEATSLLHSARIDTKPRGWTK---PSDHTPVIVSLDIPEPRKK 269 D+IM S ++ L I K SDH + + + + Sbjct: 238 DYIMYRSGKSKIELKLCEIRMNRIHDQKSINYSDHVGIYAEFSVSDQYDE 287 >gi|311746546|ref|ZP_07720331.1| endonuclease/exonuclease/phosphatase family protein [Algoriphagus sp. PR1] gi|311302536|gb|EAZ79778.2| endonuclease/exonuclease/phosphatase family protein [Algoriphagus sp. PR1] Length = 348 Score = 48.6 bits (114), Expect = 9e-04, Method: Composition-based stats. Identities = 37/250 (14%), Positives = 69/250 (27%), Gaps = 22/250 (8%) Query: 19 HNLAAWIKENNPDIICLQE-----TKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSK 73 N+ W++++ DI QE T T + + + + + L Sbjct: 110 PNVYTWLQDHPADIKVFQEFYQDFTTTSRNSI-KLLGEDMGFESSYQVIEGNPQKRSLGL 168 Query: 74 YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKR 133 + G D I I + ++ + I +K Sbjct: 169 AIFSKYSIIQEGKVFDKNGTNGAIFADILVNQDTIRIYNAHLESMRIDSEGLENIEGVKE 228 Query: 134 FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTD 193 R +L ++ + +PII D F+ +N+ + Sbjct: 229 NYRQTLGKLHRGSLERSKQLSLLVEHIQNSPHPIILMGDLNEVPYSYTYFKLSENL---E 285 Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253 +++ + +RIDHI SP+ I K SD Sbjct: 286 NAFELMGRGFGFTY--NRILIF-----LRIDHIFASPQLKP------IQFKTHREVDYSD 332 Query: 254 HTPVIVSLDI 263 H PV + Sbjct: 333 HYPVSATFTW 342 >gi|154277306|ref|XP_001539494.1| predicted protein [Ajellomyces capsulatus NAm1] gi|150413079|gb|EDN08462.1| predicted protein [Ajellomyces capsulatus NAm1] Length = 1321 Score = 48.6 bits (114), Expect = 9e-04, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 28/75 (37%), Gaps = 8/75 (10%) Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 + W G ID LSP L I + K SDH P+ +L++ Sbjct: 430 TTWQDRGSP-----GTTIDLTFLSPLLHDKLRRCAIAEEA---CKGSDHKPIETTLELTP 481 Query: 266 PRKKQQDSTSQNMKP 280 K+ + +N +P Sbjct: 482 IPKEAERRNWKNTEP 496 >gi|260903873|ref|ZP_05912195.1| hypothetical protein BlinB_00970 [Brevibacterium linens BL2] Length = 255 Score = 48.6 bits (114), Expect = 9e-04, Method: Composition-based stats. Identities = 44/276 (15%), Positives = 74/276 (26%), Gaps = 40/276 (14%) Query: 1 MSVVTVATWNVNSIR----------ARIHNLAAWIKENNPDIICLQETKTEDKNFPFET- 49 MS ++ T+N +R R+ A I + P II QE E Sbjct: 1 MSDFSIMTFN---LRYPALDGHPVATRLPIAAELITQARPHIIGTQE--GELDQLENLIS 55 Query: 50 LQSLNYHI----ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT 105 L Y + G I + + + E+ + +T Sbjct: 56 LLPKEYVWLGEGHSGGNSGEFTAVIYDSSRFDVDRVDISWLSEQPETVASESWGVSHART 115 Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165 L + + + + + + + Sbjct: 116 LTVVDFRDLVTKQPLRLLNTHLDHRSEEARLESGKIMADHLAEAAGPCVVTGDFNVATGS 175 Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225 P+ L + +N+G +F Y K+ RID Sbjct: 176 PVYNYFCTELGLTDTGAAVPGENIG---------------TFHRYKG---PKDGDPRIDW 217 Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 I+ + + S RI+T G PSDH PV L Sbjct: 218 ILTTSDL--QTVSTRINTFSAGGEYPSDHFPVEAVL 251 >gi|254418698|ref|ZP_05032422.1| endonuclease/exonuclease/phosphatase family [Brevundimonas sp. BAL3] gi|196184875|gb|EDX79851.1| endonuclease/exonuclease/phosphatase family [Brevundimonas sp. BAL3] Length = 298 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 33/275 (12%), Positives = 70/275 (25%), Gaps = 36/275 (13%) Query: 2 SVVTVATWNVNSIR-----------ARIHNLAAWIKENNPDIICLQETKTE-----DKNF 45 V + ++N IR R ++A I +PD++ +QE Sbjct: 38 RSVRLMSYN---IRYDAPDDTPNWLQRRPHMARQIAFFDPDVLGVQEALIPMVAYLADQA 94 Query: 46 PFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT 105 P + Q + + + T + Sbjct: 95 P--AYDHYGVGRDDGAQAGETTTLFWRRARFEAVSTQTLWCSPTPDRPSKGWDAALPRTV 152 Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165 R+ G + + A+ +L + ++ Sbjct: 153 TRVVLRDRASGRLLDVRNAHMDHVGAVAREQCAALAADLAPATVEGATAAVV-------- 204 Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225 D + + L + ++ D + + + G+ IDH Sbjct: 205 ---LMGDFNAGPDTAPYRRVLAAGLRDARAVSPVVFGPAGTYND-FDIARDND-GVAIDH 259 Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 + ++P + + T SDH PV+V Sbjct: 260 VFVAPGL--SVERYGVPTDSFSGQVISDHFPVVVD 292 >gi|115647238|ref|XP_001180799.1| PREDICTED: similar to bcnt, partial [Strongylocentrotus purpuratus] Length = 434 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 37/277 (13%), Positives = 81/277 (29%), Gaps = 34/277 (12%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSY 65 + TWNV ++ ++ DI+ Q E + + Sbjct: 1 IGTWNVRTLN----------QDGKLDILMSQ----------LEKFKGYKVLCASEEDVHR 40 Query: 66 NGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYD 125 GVA++ Q + + T +++ + + T YD Sbjct: 41 RGVALILNKQAQKALLGY-NTISPRLISARFQTQVGALTIIQVYAPNMADREEMIDTFYD 99 Query: 126 DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQK 185 I ++ + D++ + E +F Sbjct: 100 QLQQTIDDTPNKDILIVQGDLIAKVGRDWDT----WKNVIGHHGYGEMNNRGEKLLNFCM 155 Query: 186 LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKP 245 N+ + + + +++ D +KNK ID +M++ + S + Sbjct: 156 ANNLAIANTMFKQKNASREWTWES--PDGRTKNK---IDFVMVNNKWKSSVQ-CG--RSF 207 Query: 246 RGWTKPSDHTPVIVSLDIPEPRKKQQDS-TSQNMKPI 281 SDH VI + + K +Q++ +P+ Sbjct: 208 PSADVASDHQLVICNFKLRFKTKPKQNAIIGGKFRPL 244 >gi|294055186|ref|YP_003548844.1| Endonuclease/exonuclease/phosphatase [Coraliomargarita akajimensis DSM 45221] gi|293614519|gb|ADE54674.1| Endonuclease/exonuclease/phosphatase [Coraliomargarita akajimensis DSM 45221] Length = 261 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 41/288 (14%), Positives = 77/288 (26%), Gaps = 62/288 (21%) Query: 4 VTVATWNVN---------SI-RAR-----IHNLAAWIKENNPDIICLQETKTEDK----- 43 + T N+ + RA + + ++ PD++ +QE Sbjct: 6 LRFLTLNIAHGRGLSLYQGLHRASTIERNLQRIVRLLEREQPDVVAMQEVDGSSHWNKHI 65 Query: 44 NFPFETLQSLNYHIETCGQKSY--------NGVAILSKYQPIEIVTHLPGDDLDVQARFI 95 N + Y G + G A+LS+Y T G + F+ Sbjct: 66 NLLEFLAREAGYAYHHLGVHNRRLGKLPLAYGNALLSRYPIENPDTQAFGSAELGEKGFL 125 Query: 96 EATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYN 155 + + L + NL+L + +++ I GD+N Sbjct: 126 YSELRLPAGHLPVVNLHLDFRSRQRRLDQVERLIGYLEARHREKGGETY-FSPIICGDFN 184 Query: 156 IIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW 215 LE ++Q L + G + Sbjct: 185 SSATKQRDAV-----KHLIGYLEGHCAYQLLPSGG--KTFPSILPMQS------------ 225 Query: 216 SKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +D I + P + + SDH PV+ L++ Sbjct: 226 -------LDFIFVPPS--HEVRRCEVLKS-----YVSDHRPVVADLEL 259 >gi|218662414|ref|ZP_03518344.1| putative endonuclease/exonuclease/phosphatase family protein [Rhizobium etli IE4771] Length = 357 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 19/80 (23%), Positives = 35/80 (43%), Gaps = 22/80 (27%) Query: 207 FWDYYADSWSKNKGIRIDHIMLSPEATSL--------LHSA-----------RIDTKPR- 246 + Y+ + ++D+I LSP + + + ++ PR Sbjct: 278 WTLYHTRGPQEQHLCQLDYIWLSPALAAHNSGRLPEIIRNGQPFRTVFPPGQEVERYPRT 337 Query: 247 GWTKP--SDHTPVIVSLDIP 264 GW +P SDH PV+++LD+P Sbjct: 338 GWDRPKASDHCPVVMTLDLP 357 >gi|85000047|ref|XP_954742.1| endonuclease [Theileria annulata strain Ankara] gi|65302888|emb|CAI75266.1| endonuclease, putative [Theileria annulata] Length = 586 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 46/323 (14%), Positives = 91/323 (28%), Gaps = 79/323 (24%) Query: 5 TVATWNVNSI------RARIHNLAAWIKENNPDIICLQETK------------------- 39 T+ TWNV+ + + + +K+++PDI+ LQ+ K Sbjct: 276 TILTWNVSGLALSKSKKTIWESFLQILKQHDPDIVVLQDVKLCSSEILGKQPKLSARTYG 335 Query: 40 ----------TEDKNFPFET----LQSLN-YHIETCGQKSYNGVAILSKYQPIEIVTHLP 84 +D + E + H + + + V + +++ +++ +L Sbjct: 336 GHVSPSYAQEVQDADLVNELKRTTFKKYYLVHSLSAWRIAGQLVFVKKEFECLKMRYNLN 395 Query: 85 GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL 144 + + + +L P I + S R L + Sbjct: 396 IKANAKYHHPEGRCIILQFNSFYLISLLSPVQGWINRSV--RIRSRWDRELATFLNNSKS 453 Query: 145 EEPLIFAGDYNIIPQPHD--------------CYNPIIWENDACFTLEVRQSFQKLQNMG 190 E+ I G N PQ D + ++ L Sbjct: 454 EKATIITGCLNCAPQDIDLSDPERLKQEKSIVLHKQEELGFPGSRDVDREGFKWLLDAGN 513 Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNK------GIRIDHIMLSPEATSLLHSARI--- 241 D R H + KN +R + +++S + I Sbjct: 514 MVDVFRVKHPYDG--------TEKTEKNINDKTRCAVRTNLVLMSKNFLRNVKFCEIIGN 565 Query: 242 --DTKPRGWTKPSDHTPVIVSLD 262 D P GW H P ++ L+ Sbjct: 566 VNDLNPSGWR----HLPQLLRLE 584 >gi|315223109|ref|ZP_07864977.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus anginosus F0211] gi|315187798|gb|EFU21545.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus anginosus F0211] Length = 271 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 30/253 (11%), Positives = 62/253 (24%), Gaps = 15/253 (5%) Query: 18 IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPI 77 + LA I + D+ICLQE + + +Q+ YH + + + Sbjct: 21 LDQLAERILQEKYDVICLQEV--NQEMESEQVVQAPFYHAVDGAIAIHKDHFAHCLVERL 78 Query: 78 E----IVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKR 133 I + RF E ++ L+ L + N T + Sbjct: 79 VEKGLIYHWSWAYNHIGFDRFHEGVAILSLNPLKPRELLVSDANDPTDYHTRKVLLAETE 138 Query: 134 FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTD 193 + + + + Sbjct: 139 VDGRLVTVASCHLSW-WNKGFQEEWAQIEEELLQCNMPLVLMGDFNNPVGYEGYQHILRS 197 Query: 194 AIRATHDTHHLYSFWDYYA-----DSWSKNK-GIRIDHIMLSPEATSLLHSARIDTKPRG 247 + + W+ NK ++ID+I S + + + + + Sbjct: 198 PLALQDSHAVAATVVGTATVEGDIAGWAGNKEALKIDYIFTSKDF--NIEKSAVVFDGKA 255 Query: 248 WTKPSDHTPVIVS 260 SDH + Sbjct: 256 TPVVSDHFGLEAE 268 >gi|224177590|gb|ACN38810.1| MIP06315p [Drosophila melanogaster] Length = 441 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 39/270 (14%), Positives = 80/270 (29%), Gaps = 32/270 (11%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETCGQKSYNGVAILSKYQPIEIVTH 82 I +N PD+ICLQE + F L S NY + + I Sbjct: 150 ILQNQPDVICLQEV--DHFKFLQTVLGSQNYAGIFFPKPDSPCLYIEQNNGPDGCAIFYK 207 Query: 83 LPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK------------YDDKISW 130 L I + + + + I + + Sbjct: 208 RDKLQLQGYDTRILEVWRVQSNQVAIAARLRMRSSGREFCVATTHLKARHGALLAKLRNE 267 Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE----NDACFTLEVRQSFQKL 186 R L ++ + PL+ GD+N P + + A +++ + Sbjct: 268 QGRDLIRFVKQFAGDTPLLLCGDFNAEPVEPIYATILGCDLLRLGSAYADVKLDREEILH 327 Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA------- 239 N + + + Y+ W + + ID++ +P+ + + Sbjct: 328 PNADVGEFVAKSMKREPPYTTWKIREEGEECHT---IDYVFYTPD-RLKIKNCLDFPAGE 383 Query: 240 RIDTKPR-GWTKPSDHTPVIVSLDIPEPRK 268 +I + PSDH ++ ++ P + Sbjct: 384 QIGKNRTPSFQYPSDHFSLVCDFELLPPTE 413 >gi|161078191|ref|NP_001097746.1| curled, isoform D [Drosophila melanogaster] gi|158030219|gb|ABW08640.1| curled, isoform D [Drosophila melanogaster] Length = 642 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 39/270 (14%), Positives = 80/270 (29%), Gaps = 32/270 (11%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETCGQKSYNGVAILSKYQPIEIVTH 82 I +N PD+ICLQE + F L S NY + + I Sbjct: 351 ILQNQPDVICLQEV--DHFKFLQTVLGSQNYAGIFFPKPDSPCLYIEQNNGPDGCAIFYK 408 Query: 83 LPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK------------YDDKISW 130 L I + + + + I + + Sbjct: 409 RDKLQLQGYDTRILEVWRVQSNQVAIAARLRMRSSGREFCVATTHLKARHGALLAKLRNE 468 Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE----NDACFTLEVRQSFQKL 186 R L ++ + PL+ GD+N P + + A +++ + Sbjct: 469 QGRDLIRFVKQFAGDTPLLLCGDFNAEPVEPIYATILGCDLLRLGSAYADVKLDREEILH 528 Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA------- 239 N + + + Y+ W + + ID++ +P+ + + Sbjct: 529 PNADVGEFVAKSMKREPPYTTWKIREEGEECHT---IDYVFYTPD-RLKIKNCLDFPAGE 584 Query: 240 RIDTKPR-GWTKPSDHTPVIVSLDIPEPRK 268 +I + PSDH ++ ++ P + Sbjct: 585 QIGKNRTPSFQYPSDHFSLVCDFELLPPTE 614 >gi|161078189|ref|NP_001097745.1| curled, isoform C [Drosophila melanogaster] gi|21654879|gb|AAK85704.1| nocturin [Drosophila melanogaster] gi|158030218|gb|ABW08639.1| curled, isoform C [Drosophila melanogaster] Length = 449 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 39/270 (14%), Positives = 80/270 (29%), Gaps = 32/270 (11%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETCGQKSYNGVAILSKYQPIEIVTH 82 I +N PD+ICLQE + F L S NY + + I Sbjct: 158 ILQNQPDVICLQEV--DHFKFLQTVLGSQNYAGIFFPKPDSPCLYIEQNNGPDGCAIFYK 215 Query: 83 LPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK------------YDDKISW 130 L I + + + + I + + Sbjct: 216 RDKLQLQGYDTRILEVWRVQSNQVAIAARLRMRSSGREFCVATTHLKARHGALLAKLRNE 275 Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE----NDACFTLEVRQSFQKL 186 R L ++ + PL+ GD+N P + + A +++ + Sbjct: 276 QGRDLIRFVKQFAGDTPLLLCGDFNAEPVEPIYATILGCDLLRLGSAYADVKLDREEILH 335 Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA------- 239 N + + + Y+ W + + ID++ +P+ + + Sbjct: 336 PNADVGEFVAKSMKREPPYTTWKIREEGEECHT---IDYVFYTPD-RLKIKNCLDFPAGE 391 Query: 240 RIDTKPR-GWTKPSDHTPVIVSLDIPEPRK 268 +I + PSDH ++ ++ P + Sbjct: 392 QIGKNRTPSFQYPSDHFSLVCDFELLPPTE 421 >gi|161078193|ref|NP_001097747.1| curled, isoform E [Drosophila melanogaster] gi|73853348|gb|AAZ86746.1| RE65127p [Drosophila melanogaster] gi|108383940|gb|ABF85759.1| IP15605p [Drosophila melanogaster] gi|158030220|gb|ABW08641.1| curled, isoform E [Drosophila melanogaster] Length = 446 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 39/270 (14%), Positives = 80/270 (29%), Gaps = 32/270 (11%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETCGQKSYNGVAILSKYQPIEIVTH 82 I +N PD+ICLQE + F L S NY + + I Sbjct: 155 ILQNQPDVICLQEV--DHFKFLQTVLGSQNYAGIFFPKPDSPCLYIEQNNGPDGCAIFYK 212 Query: 83 LPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK------------YDDKISW 130 L I + + + + I + + Sbjct: 213 RDKLQLQGYDTRILEVWRVQSNQVAIAARLRMRSSGREFCVATTHLKARHGALLAKLRNE 272 Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE----NDACFTLEVRQSFQKL 186 R L ++ + PL+ GD+N P + + A +++ + Sbjct: 273 QGRDLIRFVKQFAGDTPLLLCGDFNAEPVEPIYATILGCDLLRLGSAYADVKLDREEILH 332 Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA------- 239 N + + + Y+ W + + ID++ +P+ + + Sbjct: 333 PNADVGEFVAKSMKREPPYTTWKIREEGEECHT---IDYVFYTPD-RLKIKNCLDFPAGE 388 Query: 240 RIDTKPR-GWTKPSDHTPVIVSLDIPEPRK 268 +I + PSDH ++ ++ P + Sbjct: 389 QIGKNRTPSFQYPSDHFSLVCDFELLPPTE 418 >gi|268592513|ref|ZP_06126734.1| endonuclease/exonuclease/phosphatase family protein [Providencia rettgeri DSM 1131] gi|291311920|gb|EFE52373.1| endonuclease/exonuclease/phosphatase family protein [Providencia rettgeri DSM 1131] Length = 297 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 45/280 (16%), Positives = 77/280 (27%), Gaps = 48/280 (17%) Query: 4 VTVATWNV--NSIR---ARIHNLAAWIKENNPDIICLQET--------KTED-KNFPFET 49 + VAT+N+ N + + + L I + + D+I L E K + Sbjct: 47 IKVATYNIGKNELSPDVSNLDELNKAIAKIDADVIVLTEIDNKTARSKKVHQLEEIAKAN 106 Query: 50 LQSLNYHIETCGQKSYNGVAILSKYQPIE--IVTHLPGDDLDVQARFIEATFTINTQTLR 107 + GV ILSKY+ + ++ GD + + + Sbjct: 107 KMDFAFGKALDFDGGEYGVGILSKYKIDKSKVINLPSGDAEQRVVLISQISKPGFDAPII 166 Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167 + G + K R + AS A I+ + Sbjct: 167 VM------GTHLDWQKDPTIRIGQVRHILDASIGDTDTGFDNIAASIKILAGDFNSTA-- 218 Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227 N+ + A + IDHI Sbjct: 219 ---NEQPIQEIRYMWNPVELKGIDYRSWPAVNPAID-------------------IDHIF 256 Query: 228 LSPEATSLLHSARI--DTKPRGWTKPSDHTPVIVSLDIPE 265 + I D+K W+ SDH P+I L++ E Sbjct: 257 TFKGQVWDVKKMEIPTDSKEFQWSSVSDHLPIIAELELQE 296 >gi|147857933|emb|CAN80388.1| hypothetical protein VITISV_000106 [Vitis vinifera] Length = 1130 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 34/243 (13%), Positives = 72/243 (29%), Gaps = 28/243 (11%) Query: 18 IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPI 77 + A IK+ D++CLQETK +D ++SL + V I Sbjct: 160 RKVIKALIKKQKVDLVCLQETKIQD--MSKGIIRSLG----VGRYLEWGAVDSRGAAGSI 213 Query: 78 EIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF 137 + DL I I ++ + + + + Sbjct: 214 VVFWDNRVLDL----------VDIQRGVFSISCIFKNSED-----GFKWMFTGVYGPTLR 258 Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA 197 + EE G +N +N I+ + + + ++ + ++ Sbjct: 259 RERESFWEELGAIKGLWNGPWCAAGDFNAILSPEERNRGGRMNSNMRRFLEIIEDLELKD 318 Query: 198 THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257 +++ + R+D + + + R PR SDH P+ Sbjct: 319 VPLVGGPFTW----NGGVNNQTFSRLDRFLFNEGWDNHFGDVRQCVLPR---PVSDHFPI 371 Query: 258 IVS 260 ++ Sbjct: 372 LLD 374 >gi|74143952|dbj|BAE41277.1| unnamed protein product [Mus musculus] Length = 375 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 31/97 (31%), Gaps = 5/97 (5%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73 R N+ IK + D++CLQE ++ ++ E L+SL YH E + Sbjct: 31 RFPNILKEIKHFDADVLCLQEV--QEDHYGTEIRPSLESLGYHCEYKMKTGRKPDGCAIC 88 Query: 74 YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 ++ + L + Sbjct: 89 FKHSRFSLLSVNPVEFCRRDIPLLDRDNIGLVLLLQP 125 >gi|301162733|emb|CBW22280.1| putative endonuclease/exonuclease/phosphatase family protein [Bacteroides fragilis 638R] Length = 279 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 38/284 (13%), Positives = 78/284 (27%), Gaps = 54/284 (19%) Query: 6 VATWNV------NSI---RARIHNLAAWIKENNPDIICLQET----------KTEDKNFP 46 V ++N+ +S+ R R +A I + DI+ QE + + Sbjct: 23 VMSFNIRYDNPEDSLDNWRYRKDRVANAIHFYDVDILGTQEVLHNQLEDLKLRLPEYGVV 82 Query: 47 ---FETLQSLNYHIETCGQKSYNGV-----AILSKYQPIEIVTHLPGDDLDVQARFIEAT 98 E + + +K V LS+ + G + + Sbjct: 83 GVGREDGKEKGEYSALWYKKDRFNVLDSGYFWLSETPEVAGSKGWDGACERIASWVKLQD 142 Query: 99 FTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP 158 + + G + L P+I GD+N P Sbjct: 143 KVSGKEYFALNTHLDHVGGMA--------RREGISLMLDRVNELSDGLPVIVTGDFNSEP 194 Query: 159 QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN 218 + + + N E ++ + + + Y + Sbjct: 195 ESDVIKHVTDFAN-----PEHLTDARQASPIVYGPSWSFHDFGKIPY-------NKRPL- 241 Query: 219 KGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 ID++ + + I + SDHTPV+V+++ Sbjct: 242 ----IDYVFVRNGL--KVLRYGILAETENNAFLSDHTPVLVTVE 279 >gi|296230136|ref|XP_002760576.1| PREDICTED: protein angel homolog 2 isoform 2 [Callithrix jacchus] gi|296230138|ref|XP_002760577.1| PREDICTED: protein angel homolog 2 isoform 3 [Callithrix jacchus] Length = 418 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 5/63 (7%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73 R N+ IK + D++CLQE ++ ++ E L+SL YH E + Sbjct: 74 RFPNILKEIKHFDADVLCLQEV--QEDHYGAEIRPSLESLGYHCEYKMRTGRKPDGCAIC 131 Query: 74 YQP 76 ++ Sbjct: 132 FKH 134 >gi|260170561|ref|ZP_05756973.1| hypothetical protein BacD2_01735 [Bacteroides sp. D2] gi|315918907|ref|ZP_07915147.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313692782|gb|EFS29617.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 366 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 47/272 (17%), Positives = 87/272 (31%), Gaps = 33/272 (12%) Query: 3 VVTVATWNVNSIR------ARIHNLAAWIKENNPDIICLQETKTEDK---NFPFETLQSL 53 ++TVAT+NV++ + +A++++ DI+C QE D+ + L Sbjct: 109 ILTVATYNVDAFNHEDTGYSC-KEIASYMRNLQADILCFQEFGINDEFGVDSIAAVLSDW 167 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 Y+ + + L+ + I D + + N +T+R+ N +L Sbjct: 168 PYYFIPISPEGKHL-LQLAVFSRYPIKEENLIVYPDSKNCSLWCDIETNGRTIRLFNNHL 226 Query: 114 PHGNPITSTKYDDKISWIKRFLRFAS------QRLELEEPLIFAGDYNIIPQPHDCYNPI 167 + + +K R L A + P Sbjct: 227 QTTEVSQNKRKLEKGLRTDDSQRVERAAVGLIDGLHENFRKRAAQANTLKQLIAASPYPT 286 Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227 I D + + H +Y+F + K+ +RID+I+ Sbjct: 287 IVCGDFNSLPSSYVYHTVKGDKLQDGFQTSGHGY--MYTF------KFFKHL-LRIDYIL 337 Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 SPE S SDH PV++ Sbjct: 338 HSPELNST-------DYFSPDLTYSDHNPVVM 362 >gi|221040040|dbj|BAH11783.1| unnamed protein product [Homo sapiens] Length = 418 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 5/63 (7%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73 R N+ IK + D++CLQE ++ ++ E L+SL YH E + Sbjct: 74 RFPNILKEIKHFDADVLCLQEV--QEDHYGAEIRPSLESLGYHCEYKMRTGRKPDGCAIC 131 Query: 74 YQP 76 ++ Sbjct: 132 FKH 134 >gi|281352819|gb|EFB28403.1| hypothetical protein PANDA_012024 [Ailuropoda melanoleuca] Length = 111 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 25/108 (23%), Positives = 40/108 (37%), Gaps = 12/108 (11%) Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 E R L M FTD R H Y+F+ ++S R+DHI+ Sbjct: 13 QINKERRALNDTLDEMDFTDIFRTFHPKATEYTFFSSAHGTFS-----RVDHILGHKSGL 67 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 + I SDH+ + L++ K ++S + +K I Sbjct: 68 NQYQKIGIIPWIL-----SDHS--GLKLELKHKGKVGKNSNTWRLKSI 108 >gi|323528578|ref|YP_004230730.1| endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1001] gi|323385580|gb|ADX57670.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1001] Length = 302 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 17/38 (44%), Gaps = 4/38 (10%) Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 D I ++ + + S +D R SDH P+ + L Sbjct: 256 DFIFVTEDLAPRVASCEVDPHSRS----SDHQPMWLEL 289 >gi|332109156|gb|EGJ10079.1| hypothetical protein RBXJA2T_07110 [Rubrivivax benzoatilyticus JA2] Length = 269 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 36/270 (13%), Positives = 71/270 (26%), Gaps = 34/270 (12%) Query: 4 VTVATWNVN--------SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55 + VAT+N++ R IHNL ++ + D++ LQE + F T +S + Sbjct: 21 LRVATYNIHKGVRGVGRGKRLEIHNLGLAVESFDADMVFLQEVRL------FNTRESRRF 74 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + G L+ + + + I + ++ Sbjct: 75 QRTSFGWPEQGQAEFLAPEGYDVAYRTNAITRHGEHGNALLSRWPIGD--IGHHDVSDHR 132 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + + A L L + F Sbjct: 133 FEQRGLLHVPVQWQGMTVHAVVAHFGLVHASRLRQVARLA-EFIDATVPPGEMLIVAGDF 191 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWD---YYADSWSKNKGIRIDHIMLSPEA 232 + + +G A +F +A +G+R Sbjct: 192 NDWGERLDSPMATIGLQRAFAPESTRQQRLTFPSLAPVFALDRFYLRGLR---------- 241 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 S + W + SDH P++ L+ Sbjct: 242 ---CVSTMVPRG-MAWARMSDHLPLVAELE 267 >gi|313158592|gb|EFR57986.1| endonuclease/exonuclease/phosphatase family protein [Alistipes sp. HGB5] Length = 320 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 37/307 (12%), Positives = 70/307 (22%), Gaps = 63/307 (20%) Query: 4 VTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNF--------- 45 + + WN+ N N AW+K +PD+ C E ++ Sbjct: 29 MRLLYWNIQNGMWSDQSNG----YDNFVAWVKGYDPDV-C---VWCEAQSIYKSGTAERV 80 Query: 46 ------------PFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR 93 Y + ++ V D V Sbjct: 81 DSVDRYLTANWGELAARYGHKYWYVGGHRDNFPQVVTSKYPIENVRRIVGQAPDSIVSHG 140 Query: 94 FIEATFTINTQTLRI------GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEP 147 A N + + I Y ++K + +R + Sbjct: 141 AGWARIVKNGRPVNIVTLHTWPQAYAFQAVDRDASKAEHGGDRYRRMEIEYICSHTIATQ 200 Query: 148 LIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF 207 ++ + + + + R + Sbjct: 201 SDAGQQLWMMMGDFNSRSRLDNRIYNYPDDDTRLLVHDYIAEHTPYVDVIAEKHPGEF-H 259 Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK-----PRGWTK------PSDHTP 256 + S RID + +P + A + R K PSDH P Sbjct: 260 TTTHGQS-------RIDFVYCTPPLCERITRAEVIADDFTEPVRDPGKLSNFYHPSDHRP 312 Query: 257 VIVSLDI 263 ++V D+ Sbjct: 313 ILVDFDM 319 >gi|114572548|ref|XP_001170966.1| PREDICTED: hypothetical protein isoform 1 [Pan troglodytes] Length = 418 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 5/63 (7%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73 R N+ IK + D++CLQE ++ ++ E L+SL YH E + Sbjct: 74 RFPNILKEIKHFDADVLCLQEV--QEDHYGAEIRPSLESLGYHCEYKMRTGRKPDGCAIC 131 Query: 74 YQP 76 ++ Sbjct: 132 FKH 134 >gi|329770281|ref|ZP_08261669.1| hypothetical protein HMPREF0433_01433 [Gemella sanguinis M325] gi|328836839|gb|EGF86487.1| hypothetical protein HMPREF0433_01433 [Gemella sanguinis M325] Length = 719 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 33/82 (40%), Gaps = 10/82 (12%) Query: 199 HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT---KPSDHT 255 H+ YS++ Y + S +D+I++S + + + + SDH Sbjct: 574 HEAGDRYSYF-YRGSNQS------LDNILVSKNIKDRVLFSPVHINASFMEEHGRASDHD 626 Query: 256 PVIVSLDIPEPRKKQQDSTSQN 277 PV+V +D + + + N Sbjct: 627 PVVVQIDFSKSEEVVSPEVTPN 648 >gi|229917919|ref|YP_002886565.1| Endonuclease/exonuclease/phosphatase [Exiguobacterium sp. AT1b] gi|229469348|gb|ACQ71120.1| Endonuclease/exonuclease/phosphatase [Exiguobacterium sp. AT1b] Length = 247 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 42/269 (15%), Positives = 84/269 (31%), Gaps = 36/269 (13%) Query: 4 VTVATWNVNS----IRARIHNLAAWIKENNPDIICLQETKTEDKN-FPFETLQSLNY-HI 57 + +AT+N+ + + RI + +K N D+I LQE ++ +K + ++ Y + Sbjct: 1 MRIATYNIWNHDTLWQKRIDAICQEVKRINADVIALQEVRSYEKGSVAHDIAEATGYPYC 60 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 + + + + E+ F TL G N Sbjct: 61 VFHAYPDSPDEGLAFLSKVP-----FSSVEAIWEEDVEESNFCATRVTLIFGGQEWGLTN 115 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP--HDCYNPIIWENDACF 175 + + +R + + + GD+N PQ +D + W + F Sbjct: 116 VHLNWRSSSIRECQMEVVRDWLSKGHQKAIEVLCGDFNDHPQSTIYDDVSDAGWLDVTTF 175 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E + +++ + + R D I+ E + L Sbjct: 176 VGEEARPTLDVKHNPYLQSSHLEQPE--------------------RYDWILFRSEWSEL 215 Query: 236 -LHSARIDTKPR--GWTKPSDHTPVIVSL 261 + + R PSDH V+V Sbjct: 216 EVQHVDVFGDMRTSRDVVPSDHYGVVVDF 244 >gi|269959773|ref|ZP_06174152.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269835527|gb|EEZ89607.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 287 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 39/288 (13%), Positives = 83/288 (28%), Gaps = 50/288 (17%) Query: 2 SVVTVATWNV-----NSIR-ARIHN----LAAWIKENNPDIICLQET-------KTEDKN 44 + + + +WN+ + + +R L ++ + DI+ QE K + Sbjct: 20 NSINLTSWNIEWLSIDGGKVSRTPQDFEKLTHYVDKTQADILAFQEVESAAAIQKAVGND 79 Query: 45 FPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEI-------VTHLPGDDLDVQARFIEA 97 F N N + + + +T + Sbjct: 80 FTIYLSDRANASNRHLQFNDTNQYTGFAVRNGVNVLDKPDFSITRGNSKLRFASYLVLNP 139 Query: 98 TFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII 157 T L + G + + ++ R + ++ + GD+N Sbjct: 140 NQDNETHLLSVHLKAGCSGAYRNNRDCKIVKQQGQALAKWIKAREDNKQQYVVLGDFNHN 199 Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK 217 + + ++ L + + + R + TH S Sbjct: 200 LGYRGDWLWEVLSDNTDAKLVTKN----TKAECKVRSNRNPNKTHQFRSV---------- 245 Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWT----KPSDHTPVIVSL 261 IDHI++S + + S+ + T + K SDH PV +L Sbjct: 246 -----IDHIIVSGDLKA---SSGVQTVFKTQDVLDYKLSDHCPVSTTL 285 >gi|163789004|ref|ZP_02183448.1| endonuclease/exonuclease/phosphatase family protein [Flavobacteriales bacterium ALC-1] gi|159875668|gb|EDP69728.1| endonuclease/exonuclease/phosphatase family protein [Flavobacteriales bacterium ALC-1] Length = 332 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 41/273 (15%), Positives = 81/273 (29%), Gaps = 46/273 (16%) Query: 4 VTVATWNVNSIRA---------RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 +++ ++NV S + I + + NPDI+ LQE + E L+ Sbjct: 92 ISLISYNVRSFKQPVHSDSQQNAITEIKKIVDSINPDILLLQE------SSYKEGLRIKG 145 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 Y G + +L+ Y I+ D D I A I T+RI N +L Sbjct: 146 YSNVFLGYRKDVQKTLLTIYSKYPIINKGFIDFSDTYNNAIFADLKIKQDTVRIYNTHLQ 205 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 D + ++ ++E+ + + Sbjct: 206 SFVFAPHIIADKYNDYNYLSNLNSTISKQVEQAKLVK-----------NHASKSNSKVII 254 Query: 175 FTLEVRQSFQKLQNMGFTD----AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230 S+ + + + + + YS Y +R+D+ + Sbjct: 255 CGDFNATSYSQPYRILKKELNDSYVSNGNGFGATYSLLRYP---------LRLDYFLSDK 305 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + + + SDH P+ + I Sbjct: 306 QI-------EVLSHKNFDFNLSDHEPIYIKFKI 331 >gi|170650688|ref|NP_612535.1| nocturnin [Rattus norvegicus] gi|149064849|gb|EDM15000.1| similar to Nocturnin (CCR4 protein homolog) [Rattus norvegicus] Length = 428 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 35/264 (13%), Positives = 68/264 (25%), Gaps = 28/264 (10%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFE--TLQSLNYHIETCGQKSYNGVAILSKYQPIE 78 + I PDI+CLQE D F L L Y + S +E Sbjct: 176 ILEEILAYQPDILCLQEV---DHYFDTFQPLLSRLGYQGTFFPKP-------WSPCLDVE 225 Query: 79 IVTHLPGD--DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 G + + I + + + + + + L+ Sbjct: 226 HNNGPDGCALFFLQSRFKLINSTNIRLTAMTLKTNQVAIAQTLECKESGRQFCIAVTHLK 285 Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN----MGFT 192 + N+ P+I D + Sbjct: 286 ARTGWERFRSAQGCDLLQNLQNITEGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAY 345 Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR------ 246 + + Y+ W ++ +D+I S A S+ + + T+ + Sbjct: 346 KLLSPDGQSEPPYTTWKIRTSGECRHT---LDYIWYSRHALSVTSALDLLTEEQIGPNRL 402 Query: 247 -GWTKPSDHTPVIVSLDIPEPRKK 269 + PSDH ++ E + Sbjct: 403 PSFHYPSDHLSLVCDFSFNEEPDE 426 >gi|254438485|ref|ZP_05051979.1| endonuclease/exonuclease/phosphatase family [Octadecabacter antarcticus 307] gi|198253931|gb|EDY78245.1| endonuclease/exonuclease/phosphatase family [Octadecabacter antarcticus 307] Length = 289 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 41/287 (14%), Positives = 74/287 (25%), Gaps = 51/287 (17%) Query: 2 SVVTVATWNVNSI---RA----------RIHN-LAAWIKENNPDIICLQET----KTE-D 42 + + +AT+NV+ I R+ R L K + D+I QE + + Sbjct: 28 NTLRIATYNVHYIWLGRSQGDWSVGDWERRKGPLQTAFKTLDADVIGFQEMESFGRGQAP 87 Query: 43 KNFPFETLQS--LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT 100 N + L+S L+Y G S Y+ ++ G + + T Sbjct: 88 ANLTLDWLESQNLDYAAAAVGDPSTFPSTQPIFYRKDRLLLRDQGWFFFSDTPDVIYSRT 147 Query: 101 INTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP 160 N + G F L E + Sbjct: 148 FNGSWPAFASWAEFEGR---------------DGTIFRVYNLHTEYRSRSNRRLSAALVA 192 Query: 161 HDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG 220 P+ + + +FW + N+G Sbjct: 193 QRIAEPMQRMPVFVIGDFNAIRGSATLGLLEDANV----------TFWPAQGSKFHFNRG 242 Query: 221 I----RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + ID I S + + + +DH PV+ + Sbjct: 243 LNLFPAIDRIGGSERIVPVGETFSV-RGQFDGEWATDHYPVVGDFRV 288 >gi|153009147|ref|YP_001370362.1| endonuclease/exonuclease/phosphatase [Ochrobactrum anthropi ATCC 49188] gi|151561035|gb|ABS14533.1| Endonuclease/exonuclease/phosphatase [Ochrobactrum anthropi ATCC 49188] Length = 369 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 27/141 (19%), Positives = 47/141 (33%), Gaps = 24/141 (17%) Query: 145 EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL 204 + + GD+N + +E + L GF + Sbjct: 230 DRRWLICGDFNDYRERIIIGGDEWNGYQFTPMVEEESALDVLLADGFAVNLVERRPVMDR 289 Query: 205 YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA-------------------RIDTKP 245 ++ Y+ + ++D+IM SP A +I+ P Sbjct: 290 WTL--YHTRGPQERHLCQLDYIMASPSFAKKNEKAVPNIIRRGQPWRTIFPPDQQIERYP 347 Query: 246 R-GWTKP--SDHTPVIVSLDI 263 R GW +P SDH PV V+L++ Sbjct: 348 RTGWDRPKASDHCPVAVTLNM 368 >gi|148982124|ref|ZP_01816600.1| hypothetical protein VSWAT3_19371 [Vibrionales bacterium SWAT-3] gi|145960657|gb|EDK26003.1| hypothetical protein VSWAT3_19371 [Vibrionales bacterium SWAT-3] Length = 291 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 40/275 (14%), Positives = 77/275 (28%), Gaps = 22/275 (8%) Query: 4 VTVATWNVN--SIRARIHNLAA------------WIKENNPDIICLQETKTEDKNFPFET 49 +T+++WN+ S ++ + + + N D++ QE D + Sbjct: 23 LTISSWNIEWLSTNEAVNKFSDKRDQADFDKLGRYFQSLNADVVAFQEV---DDVNAIQR 79 Query: 50 LQSLNYHI-ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108 + Y I + NG + G L A F T + + Sbjct: 80 VAGDQYQILMSDRALPKNGNHQFKEVNQYTGFAVRKGVALTDYADFPLETTSNSKLRFAS 139 Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168 + PI K + E+ + ++ Y + Sbjct: 140 YIVIETETKPIHMLSVHLKAGCSGAYKSNRDCSRLKEQAQQLNKWIKQRERNNEDYAILG 199 Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 N + Q A R T + S + + IDHI++ Sbjct: 200 DFNHNLAYSRDWIWKELTQYTDAQLATRKTRADCKVRS---NRNNHRTHQFRSVIDHIVV 256 Query: 229 SPEATSLLHSARIDTKPRGWT-KPSDHTPVIVSLD 262 S + ++ K SDH PV +++ Sbjct: 257 SESLNAAPAKQQVFKTQDVLDYKLSDHCPVSTTIN 291 >gi|125579119|gb|EAZ20265.1| hypothetical protein OsJ_35869 [Oryza sativa Japonica Group] Length = 345 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 39/294 (13%), Positives = 78/294 (26%), Gaps = 52/294 (17%) Query: 2 SVVTVATWNVNS------IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55 + T+NV R R+ L IK +NPD+IC QE Y Sbjct: 74 KTFKIMTYNVWFHEDLELCR-RMDALGDLIKNHNPDLICFQEV------------TPNIY 120 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + LS ++ + F F+ + + ++ Sbjct: 121 LLLQKSDWWQEYRCSLSNSMAMQRKYYCMQMSKLPVESFDCTPFSNSIMGRELCVAHVKT 180 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP-IIWENDAC 174 G + + Q E I+ + + +D Sbjct: 181 GGAVKLVLATSHLESPMPGPPTWDQMYSTERVAQANKSLKILGSFRNVIFCGDMNWDDKG 240 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI--RIDHIMLSPEA 232 + G+TDA +++ S N+ + R+D + + Sbjct: 241 DGPFPLPA-------GWTDAWIELKPGEDGWTYDTKANSMLSANRKLQKRLDRFVC--KL 291 Query: 233 TS------------------LLHSARIDTKPRGWT---KPSDHTPVIVSLDIPE 265 + ++ + R PSDH +++S+ + Sbjct: 292 ADFKINNIQMIGKNAIPGLSYVKEKKVRKEVRKLELPVLPSDHFGLVLSITLES 345 >gi|221198686|ref|ZP_03571731.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans CGD2M] gi|221204948|ref|ZP_03577964.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans CGD2] gi|221174739|gb|EEE07170.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans CGD2] gi|221181137|gb|EEE13539.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans CGD2M] Length = 280 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 25/58 (43%), Gaps = 3/58 (5%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 +D I + P LL + R SDH P++ + P+P K + + + +P Sbjct: 216 LDRIWVHPG--ELLVDVAVHRSARAR-HASDHYPLVARMRAPQPEPKPEPAAAPFDRP 270 Score = 47.9 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 7/41 (17%) Query: 4 VTVATWNVNS------IRARIHNLAAWIKENNPDIICLQET 38 + +AT+N++ RA +AA I E + D+I LQE Sbjct: 29 LRIATYNIHGGYGPWHARAA-DRIAAVIDELDADVIALQEV 68 >gi|289774208|ref|ZP_06533586.1| secreted protein [Streptomyces lividans TK24] gi|289704407|gb|EFD71836.1| secreted protein [Streptomyces lividans TK24] Length = 274 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 78/259 (30%), Gaps = 60/259 (23%) Query: 18 IHNLAAWIKENNPDIICLQET------KTEDKNFPFETLQSLNYHIET------------ 59 + +A I+++ D++ LQE +++ + P E + L YH+ Sbjct: 53 LRRVANVIRKSGADVVGLQEVDKHYSARSDWADQPAELAELLGYHVVFGANIDNSPPAPG 112 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 + Y + T L Q + AT ++ + + N +L G+ Sbjct: 113 GHRVQYGTAILSRYPITASDNTWLYKSPGQEQRGLLHATLDVHGKKVEFYNTHLAAGSQA 172 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + + +P I GD+N +P + DA Sbjct: 173 DRLQQ----------TAQVVDLIGTRKPGILVGDFNALPAAPESQPLQNAYTDA------ 216 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + L G A T RID I + T L+ A Sbjct: 217 --WAKSLHARGDGATYPAQSPTE-------------------RIDLIYATRRVTPLV--A 253 Query: 240 RIDTKPRGWTKPSDHTPVI 258 ++ SDH P++ Sbjct: 254 QVLKD---DPAASDHRPLL 269 >gi|256790330|ref|ZP_05528761.1| secreted protein [Streptomyces lividans TK24] Length = 279 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 43/259 (16%), Positives = 78/259 (30%), Gaps = 60/259 (23%) Query: 18 IHNLAAWIKENNPDIICLQET------KTEDKNFPFETLQSLNYHIET------------ 59 + +A I+++ D++ LQE +++ + P E + L YH+ Sbjct: 58 LRRVANVIRKSGADVVGLQEVDKHYSARSDWADQPAELAELLGYHVVFGANIDNSPPAPG 117 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 + Y + T L Q + AT ++ + + N +L G+ Sbjct: 118 GHRVQYGTAILSRYPITASDNTWLYKSPGQEQRGLLHATLDVHGKKVEFYNTHLAAGSQA 177 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + + +P I GD+N +P + DA Sbjct: 178 DRLQQ----------TAQVVDLIGTRKPGILVGDFNALPAAPESQPLQNAYTDA------ 221 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + L G A T RID I + T L+ A Sbjct: 222 --WAKSLHARGDGATYPAQSPTE-------------------RIDLIYATRRVTPLV--A 258 Query: 240 RIDTKPRGWTKPSDHTPVI 258 ++ SDH P++ Sbjct: 259 QVLKD---DPAASDHRPLL 274 >gi|242075302|ref|XP_002447587.1| hypothetical protein SORBIDRAFT_06g004861 [Sorghum bicolor] gi|241938770|gb|EES11915.1| hypothetical protein SORBIDRAFT_06g004861 [Sorghum bicolor] Length = 626 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 29/242 (11%), Positives = 65/242 (26%), Gaps = 32/242 (13%) Query: 23 AWIKEN----NPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIE 78 W+KE+ + DI+ LQET +F L+ + Sbjct: 316 NWVKEHILLEDLDIVALQET--MKHDFSNCELKEM-----------------AGTNDFHW 356 Query: 79 IVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFA 138 + G + F I + L + ++ +Y + + Sbjct: 357 LWAPARGHSRGLITGVKSDDFEIEQTNISTFFLATLLRDRKSNHRYWIMNVYGPAHHDMS 416 Query: 139 SQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT 198 L+ + I+ E + + Sbjct: 417 EVFLQELNEFCVGNTFPILMGGDFNLTQNNNERNQGHGDPRLMTMFNNFIGDLQLKEIFI 476 Query: 199 HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVI 258 + +++ ++ I++D I+ S + +K R SDH+P++ Sbjct: 477 --SGVKFTW----SNKQRNPTLIKLDRILASTYWDIRYSRCFVWSKAR---VGSDHSPLL 527 Query: 259 VS 260 + Sbjct: 528 LD 529 >gi|254452409|ref|ZP_05065846.1| endonuclease/exonuclease/phosphatase family [Octadecabacter antarcticus 238] gi|198266815|gb|EDY91085.1| endonuclease/exonuclease/phosphatase family [Octadecabacter antarcticus 238] Length = 290 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 39/286 (13%), Positives = 76/286 (26%), Gaps = 51/286 (17%) Query: 3 VVTVATWNVNSI---RA----------RIHN-LAAWIKENNPDIICLQET----KTEDKN 44 + VAT+NV+ I RA R L A + D++ QE + + Sbjct: 30 TLRVATYNVHYIWLGRAQGDWSVGDWERRKGALQAAFVSLDADVVGFQEMESFGRGQAPQ 89 Query: 45 -FPFETLQS--LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI 101 + L+ Y G + Y+ + G + + T Sbjct: 90 NLTLDWLREQNPGYAAAAVGDPAVFPSTQPIFYRKDRLTLRDQGWFFFSDTPDVIYSRTF 149 Query: 102 NTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161 N + +++D+ I R ++ + + Sbjct: 150 NGSWPAFTSWA----------EFEDRDGTIFRVYNLHTEYRSMSNKQLSVALVAARIAEP 199 Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI 221 P+ D +FW ++ N+G+ Sbjct: 200 AARMPVFVIGDFNAIRGSTTLGVLEDANV---------------TFWPVQGSTFHFNRGL 244 Query: 222 ----RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 IDHI S + + + + +DH PV+ + Sbjct: 245 NLFPAIDHIGGSDGISPVGKTFSV-RGRFDGEWATDHYPVVGDFAV 289 >gi|147859197|emb|CAN81837.1| hypothetical protein VITISV_001932 [Vitis vinifera] Length = 342 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 9/38 (23%), Positives = 21/38 (55%), Gaps = 2/38 (5%) Query: 4 VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETK 39 + + +WN + +R + +++ NPD++ +ETK Sbjct: 1 MKIISWNTKGLGSRKKRRVVKDFLRLENPDVVMFRETK 38 >gi|147768824|emb|CAN69264.1| hypothetical protein VITISV_040482 [Vitis vinifera] Length = 662 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 2/38 (5%) Query: 7 ATWNVNSIR-ARIHNLAA-WIKENNPDIICLQETKTED 42 +WNV + + + IK D++CLQETK ++ Sbjct: 408 LSWNVRGVNDSNKRRVIKSVIKSQKADVVCLQETKIKE 445 >gi|34392557|dbj|BAC82607.1| pol-like protein [Tetraodon nigroviridis] Length = 1302 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 37/261 (14%), Positives = 66/261 (25%), Gaps = 26/261 (9%) Query: 1 MSVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 M ++T N+N R+ L + N D++ +QET + KN I Sbjct: 10 MCDFNISTLNLNGARSDFKRAALFKLMDIKNIDVLLVQETHSCQKNHSDWRRAFNGEAIL 69 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + G GV +L + + I V + + L + Y P Sbjct: 70 SHGSSLSGGVGVLFARRFLPISFTTDEIIPGVLLKVKAVFENVKLVFLSV---YAPTNQV 126 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + I L + + D + + A Sbjct: 127 ERMAFLNILSDCIANSADEGFMFLGGDFNCTVSPDLDRNHPEPHPASARALGRLAE---- 182 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 + D R + Y++ S R+D ++ Sbjct: 183 ---------SRELADVWRTFNREAKQYTYSHSRGMVLSA---ARLDRFYCFKHHFNVFKK 230 Query: 239 ARIDTKPRGWTKPSDHTPVIV 259 I +DH V Sbjct: 231 CVI-----SPVGFTDHCLVTC 246 >gi|320168591|gb|EFW45490.1| hypothetical protein CAOG_03474 [Capsaspora owczarzaki ATCC 30864] Length = 397 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 31/266 (11%), Positives = 64/266 (24%), Gaps = 21/266 (7%) Query: 19 HNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYHIETCGQKSYN---------GV 68 + +K+ N DII L E + L Y V Sbjct: 132 DRVVKVLKDVNADIINLVEIENCTILYYLVNALPGFGYKPYLITGTDTATGQNVGILTRV 191 Query: 69 AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKI 128 E + P A T ++ L + + Sbjct: 192 DPYMAMTRDESRQNYPVPGTQCAAATASGTTGVSKHYLTAFQINNKKVGMMGLHLLSQPW 251 Query: 129 SWIKRFLRFASQRLELEEPLIFAGDYN-------IIPQPHDCYNPIIWENDACFTLEVRQ 181 R A + + + + ++ Sbjct: 252 QAENCRKREAQALVARNAADTILAGVDELIFLGDFNDYDGTVLDIAGSVPTSRTLEYLKT 311 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYS-FWDYYADSWSK--NKGIRIDHIMLSPEATSLLHS 238 + + + Y+ +WD + ++ IDH+++S + + + Sbjct: 312 PINPSTAHLALSNVASHVPLENRYTSWWDKDNSCVDEGGDEHTSIDHMLVSAGLAAGIQN 371 Query: 239 ARIDTKPRGWTKP-SDHTPVIVSLDI 263 D + + SDH PV+V + Sbjct: 372 VLFDHEFVACCQCVSDHWPVVVDFAV 397 >gi|307136223|gb|ADN34060.1| endonuclease/exonuclease/phosphatase family protein [Cucumis melo subsp. melo] Length = 481 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 31/237 (13%), Positives = 65/237 (27%), Gaps = 30/237 (12%) Query: 1 MSVVTVATWNVNS-----IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55 + V + T+NV +R R+ L I+ ++PD+IC QE Y Sbjct: 211 LKPVKIMTYNVWFREDLELRNRMRALGQLIQRHSPDVICFQEV------------TPAIY 258 Query: 56 HIE-TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 I +++ L +I + L IGNL + Sbjct: 259 DIFQITNWWKVYRCSVIKDSHSRGYFCMLLSKLPVKSFSCQPFPNSIMGRELCIGNLEVQ 318 Query: 115 HGNPITS-TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 +G +T T + + + + + P + + Sbjct: 319 NGISLTVATSHLESPCPAPPKWNQMYSKERVVQAKQAVDFLKETPNVIFGGDMNWDDKLD 378 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI--RIDHIML 228 + + + +++ S N+ + R+D + Sbjct: 379 GQFPFPDGWIDAWEELR---------PGENGWTYDTKSNKMLSGNRTLQKRLDRFIC 426 >gi|282878661|ref|ZP_06287430.1| endonuclease/exonuclease/phosphatase family protein [Prevotella buccalis ATCC 35310] gi|281299206|gb|EFA91606.1| endonuclease/exonuclease/phosphatase family protein [Prevotella buccalis ATCC 35310] Length = 248 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 33/243 (13%), Positives = 57/243 (23%), Gaps = 12/243 (4%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQP 76 R + + I+ + DI QE F +Q + +G Sbjct: 14 RKELVKSLIRFHEFDIFGTQE------GFKHMLVQIAELKQYAWIGEGRDGGDEGEHSAI 67 Query: 77 IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 D N G + F Sbjct: 68 FYRKDRFDLLDSGNFWYSETPEKVGLGWDATCCNRICSWGKFREKISGKIFFLFNSHFDH 127 Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIR 196 L+ +I + + L + +I+ Sbjct: 128 QGVIARRESARLLLQKIKSIAGTNATVISTGDFNATPESEPIRILLNDGLLLDSYKISIQ 187 Query: 197 ATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTP 256 + T+ + W K K RIDHI ++ + + + PSDH P Sbjct: 188 PPYGTYGTSNGW----KIREKGKDQRIDHIFVTKDV--SIQKYGVINDIPYGQFPSDHYP 241 Query: 257 VIV 259 V+V Sbjct: 242 VMV 244 >gi|265763129|ref|ZP_06091697.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|263255737|gb|EEZ27083.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] Length = 287 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 38/284 (13%), Positives = 79/284 (27%), Gaps = 54/284 (19%) Query: 6 VATWNV------NSI---RARIHNLAAWIKENNPDIICLQET----------KTEDKNFP 46 V ++N+ +S+ R R +A I + DI+ QE + + Sbjct: 31 VMSFNIRYDNPEDSLDNWRYRKDRVANAIHFYDVDILGTQEVLHNQLEDLKLRLPEYGVV 90 Query: 47 ---FETLQSLNYHIETCGQKSYNGV-----AILSKYQPIEIVTHLPGDDLDVQARFIEAT 98 E + + +K V LS+ + G + + Sbjct: 91 GVGREDGKEKGEYSALWYKKDRFNVLDSGYFWLSETPEVAGSKGWDGACERIASWVKLQD 150 Query: 99 FTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP 158 + + + G + L P+I GD+N P Sbjct: 151 KVSDKEYFALNTHLDHVGGMA--------RREGISLMLDRVNELSDGLPVIVTGDFNSEP 202 Query: 159 QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN 218 + + N E ++ ++ + + Y + Sbjct: 203 ESDVIKHVTDSVN-----PEHLTDARQASSIVYGPSWSFHDFGKIPY-------NKRPL- 249 Query: 219 KGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 ID++ + + I + SDHTPV+V+++ Sbjct: 250 ----IDYVFVRNGL--KVLRYGILAETENNGFLSDHTPVLVTVE 287 >gi|254473115|ref|ZP_05086513.1| endonuclease/exonuclease/phosphatase family protein [Pseudovibrio sp. JE062] gi|211957836|gb|EEA93038.1| endonuclease/exonuclease/phosphatase family protein [Pseudovibrio sp. JE062] Length = 282 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 36/272 (13%), Positives = 75/272 (27%), Gaps = 25/272 (9%) Query: 21 LAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEI 79 L ++ + PD++CLQE T + + + + H+ + V Sbjct: 14 LLPYLSQALPDVLCLQEVVHTPESDKDWLAYRD-GDHVLPQRANFFRDVCEALPEHVAVF 72 Query: 80 VTHLPGDDLDVQARFIEATFTINTQTLR----------IGNLYLPHGNPITSTKYDDKIS 129 G D + + Y G Sbjct: 73 CPAAQGVLWDDEKSVPSQWGLATFVHRSFPIIGQVQGFVHKGYSADGYGEHPRSRSAHGV 132 Query: 130 WIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNM 189 + + + L P ++ + A E + N+ Sbjct: 133 RVYDYASDRVVSITQMHGLRDLNGKMDTPDRLAQAKRLLKISQAVSEPEDLRVICGDFNV 192 Query: 190 GFTDAIRATHDTHH------LYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + Y F +S+ K G D++++ + + ++ Sbjct: 193 EPDSETIRLLEADGLVELVKHYGFETTR-NSYYKKPGKFADYMLIDQ--IEQISTFQVLQ 249 Query: 244 KPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTS 275 KP + SDH P++++L+ KQQ + S Sbjct: 250 KP----EVSDHCPLVLTLNSDVTEAKQQRAHS 277 >gi|91781292|ref|YP_556499.1| hypothetical protein Bxe_C1289 [Burkholderia xenovorans LB400] gi|91693952|gb|ABE37149.1| Conserved hypothetical protein [Burkholderia xenovorans LB400] Length = 290 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 17/38 (44%), Gaps = 4/38 (10%) Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 D I ++ T + + +D R SDH P+ + L Sbjct: 256 DFIFVTENLTPRVAACEVDPHSR----ASDHQPLWLEL 289 >gi|8823|emb|CAA35587.1| unnamed protein product [Drosophila melanogaster] Length = 888 Score = 48.6 bits (114), Expect = 0.001, Method: Composition-based stats. Identities = 40/259 (15%), Positives = 73/259 (28%), Gaps = 40/259 (15%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 M+ + ++ WN N + L +I E N D++ L ET +KN Y Sbjct: 1 MASLRISLWNANGVSRHTQELTQFIYEKNIDVMLLSETHLTNKN----NFHIPGYLFYGT 56 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 I H + + +N + + +Y P PI+ Sbjct: 57 NHPDGKAHGGTGILIRNRIKHHHLNNFDKNYLQSTSIALQLNNGSTTLAAVYCPPRFPIS 116 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 ++ L + I AGDYN Sbjct: 117 EDQF-------------MEFFNTLGDRFIAAGDYNAKHTHWGSRLVSPKGK--------- 154 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 +L N + + + ++W + + ID ++ + +A Sbjct: 155 ----QLYNALTKPENKLDYVSPGKPTYWP----ADPRKIPDLID-FAITKHVPRNMVTAE 205 Query: 241 IDTKPRGWTKPSDHTPVIV 259 SDH+PV + Sbjct: 206 ALADLS-----SDHSPVFL 219 >gi|116251825|ref|YP_767663.1| hypothetical protein RL2065 [Rhizobium leguminosarum bv. viciae 3841] gi|115256473|emb|CAK07557.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae 3841] Length = 267 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 9/35 (25%), Positives = 17/35 (48%), Gaps = 1/35 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQET 38 + + + N R L ++ +PD++CLQE Sbjct: 1 MRIISLNAWGGRLH-EALIEYVTAADPDVLCLQEV 34 >gi|42397986|gb|AAS13459.1| putative reverse transcriptase [Drosophila simulans] Length = 888 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 40/259 (15%), Positives = 73/259 (28%), Gaps = 40/259 (15%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 M+ + ++ WN N + L +I E N D++ L ET +KN Y Sbjct: 1 MASLRISLWNANGVSRHTQELTQFIYEKNIDVMLLSETHLTNKN----NFHIPGYLFYGT 56 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 I H + + +N + + +Y P PI+ Sbjct: 57 NHPDGKAHGGTGILIRNRIKHHHLNNFDKNYLQSTSIALQLNNGSTTLAAVYCPPRFPIS 116 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 ++ L + I AGDYN Sbjct: 117 EDQF-------------MEFFNTLGDRFIAAGDYNAKHTHWGSRLVSPKGK--------- 154 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 +L N + + + ++W + + ID ++ + +A Sbjct: 155 ----QLYNALTKPENKLDYVSPGKPTYWP----ADPRKIPDLID-FAITKHVPRNMVTAE 205 Query: 241 IDTKPRGWTKPSDHTPVIV 259 SDH+PV + Sbjct: 206 ALADLS-----SDHSPVFL 219 >gi|78066588|ref|YP_369357.1| endonuclease/exonuclease/phosphatase [Burkholderia sp. 383] gi|77967333|gb|ABB08713.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. 383] Length = 284 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 4/38 (10%) Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 D + ++ + ID R SDH PV++ L Sbjct: 250 DFVFVTDTLLPRVTRCEIDGDVR----ASDHQPVLLEL 283 >gi|253566723|ref|ZP_04844175.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|251944286|gb|EES84775.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] Length = 287 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 38/284 (13%), Positives = 79/284 (27%), Gaps = 54/284 (19%) Query: 6 VATWNV------NSI---RARIHNLAAWIKENNPDIICLQET----------KTEDKNFP 46 V ++N+ +S+ R R +A I + DI+ QE + + Sbjct: 31 VMSFNIRYDNPEDSLDNWRYRKDRVANAIHFYDVDILGTQEVLHNQLEDLKLRLPEYGVV 90 Query: 47 ---FETLQSLNYHIETCGQKSYNGV-----AILSKYQPIEIVTHLPGDDLDVQARFIEAT 98 E + + +K V LS+ + G + + Sbjct: 91 GVGREDGKEKGEYSALWYKKDRFNVLDSGYFWLSETPEVAGSKGWDGACERIASWVKLQD 150 Query: 99 FTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP 158 + + + G + L P+I GD+N P Sbjct: 151 KVSDKEYFALNTHLDHVGGMA--------RREGISLMLDRVNELSDGLPVIVTGDFNSEP 202 Query: 159 QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN 218 + + N E ++ ++ + + Y + Sbjct: 203 ESDVIKHVTDSAN-----PEHLTDARQASSIVYGPSWSFHDFGKIPY-------NKRPL- 249 Query: 219 KGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 ID++ + + I + SDHTPV+V+++ Sbjct: 250 ----IDYVFVRNGL--KVLRYGILAETENNGFLSDHTPVLVTVE 287 >gi|291299746|ref|YP_003511024.1| endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis DSM 44728] gi|290568966|gb|ADD41931.1| Endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis DSM 44728] Length = 315 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 44/294 (14%), Positives = 81/294 (27%), Gaps = 53/294 (18%) Query: 4 VTVATWN-------VNSIRARIHNLAAWIKENNPDIICLQE---TKTED--KNFPFETLQ 51 + V ++N VN RA + +IK D+I LQE T + K ++ LQ Sbjct: 37 LKVMSFNLWHGGSQVNDYRA--KQV-EFIKSTGADVITLQESSVTSARELAKALDWDYLQ 93 Query: 52 SL-------NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 + Y I Q+ N + + L N Sbjct: 94 ADADRGIISRYEIVDDTQQPSNAGFGVHIELDSGQRVAVWNAHLGYDPYGPYDACFDNMS 153 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 I G +I+ I +R + L+ Sbjct: 154 VDEILEREAESGRTG-------QITDILADMRDDLANADQTPVLLTGDFNAPSHLDWTAA 206 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY---SFWDYYADSWSKNKGI 221 ++ + K G TD+ R + ++ + + K+ G Sbjct: 207 TADSHCG---YSDIPWPTSVKPAEAGLTDSFREANPDPAAVPGNTW----SPVYPKHDGS 259 Query: 222 --------RIDHIM------LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 RID+I+ ++ ++ + SDH V+ + Sbjct: 260 TGADEPQDRIDYILYKGGLTVTDSQALVVGEPQPVPDHADNEWTSDHAAVLTTF 313 >gi|126663886|ref|ZP_01734881.1| hypothetical protein FBBAL38_10402 [Flavobacteria bacterium BAL38] gi|126624150|gb|EAZ94843.1| hypothetical protein FBBAL38_10402 [Flavobacteria bacterium BAL38] Length = 316 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 36/257 (14%), Positives = 60/257 (23%), Gaps = 23/257 (8%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + WN I PDI+ + E ++E+K F L G Sbjct: 1 MRIIEWNCQG---AFRKKNDRILSLQPDILIVPECESENK-LKFGDLTPKPNDFFWYGDS 56 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 G+ I S + + + I + Sbjct: 57 ENKGIGIFSYSDYKFELLKIFNPRFRFIIPLKVIGKDSSFLLFAIWAMDNKEKPEERYIG 116 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 L L + D + +D LE + F Sbjct: 117 QIWLAINYYSNLLSLPCILTGDFNSNKIWD---------EKERVGNHSDMVGFLEKKNIF 167 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + + H T H+Y K ID+ S ++ Sbjct: 168 CLYHMQENIEQGKEIHPTFHMY---------RKTEKPYHIDYFFASDLIIKDGFEIKVGK 218 Query: 244 KPRGWTKPSDHTPVIVS 260 W SDH P+ + Sbjct: 219 -VENWIDLSDHVPLTLE 234 >gi|157145931|ref|YP_001453250.1| hypothetical protein CKO_01684 [Citrobacter koseri ATCC BAA-895] gi|157083136|gb|ABV12814.1| hypothetical protein CKO_01684 [Citrobacter koseri ATCC BAA-895] Length = 300 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 38/275 (13%), Positives = 67/275 (24%), Gaps = 38/275 (13%) Query: 4 VTVATWNVNSIRARIHNLAAW------IKENNPDIICLQET-----KTEDKNFPFETLQS 52 + +AT+N+ N+A + IK+ DII + E +++ + + Sbjct: 50 LRIATYNI-GKNEASENVADFTSLNAAIKKIAADIIAVPEVDNKTARSQKIDQLKTIADA 108 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 NYH ++G + H +L Sbjct: 109 NNYHYAFGKALDFDGGEYGLGILSKYKIQHTQVINLPSGDAEQRVALLAQIAVPGFDTPV 168 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 L + K R L S + A I+ + + Sbjct: 169 LVMVTHLDWQKDPTMRIEQVRHLLDVSIGDASSDFKDIASSIKILAGDFNSTRDEQPLKE 228 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 + Y W + IDHI Sbjct: 229 IGYF------------------FNPVEKQGTDYRTWPAVNPAID------IDHIFTFKGQ 264 Query: 233 TSLLHSARIDTK--PRGWTKPSDHTPVIVSLDIPE 265 + I W+ SDH P I +++ E Sbjct: 265 KWDVKKIDIPHNSPAFTWSSASDHLPFIADMELTE 299 >gi|312194867|ref|YP_004014928.1| endonuclease/exonuclease/phosphatase [Frankia sp. EuI1c] gi|311226203|gb|ADP79058.1| Endonuclease/exonuclease/phosphatase [Frankia sp. EuI1c] Length = 357 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 7/46 (15%) Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEP 266 IRIDH++ SP I RG SDH PVI +L + P Sbjct: 319 IRIDHVLASPAFA-------ITGYHRGGNDGSDHLPVIANLALRRP 357 >gi|238027065|ref|YP_002911296.1| endonuclease/exonuclease/phosphatase [Burkholderia glumae BGR1] gi|237876259|gb|ACR28592.1| Endonuclease/exonuclease/phosphatase [Burkholderia glumae BGR1] Length = 285 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 32/289 (11%), Positives = 67/289 (23%), Gaps = 37/289 (12%) Query: 4 VTVATWNV-----NSIRARI-HNLAAWIKENNPDIICLQE-TKT--------EDKNFPFE 48 + + WN+ S R + +A + D+ C+QE T+ F Sbjct: 1 MRLIDWNIQWGRDASGRVELARTVAQARALADFDVWCVQELTRGFAALPGGPGPDQFAEL 60 Query: 49 TLQSLNY---HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT 105 Y G ++ G L + T + Sbjct: 61 AALLPGYTVIEAIAVDLPPAAGGVARRQFGNAIATRLPVGRVLRHMLPWPAEAGTPSMPR 120 Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165 + + G P+ + L + + P Sbjct: 121 IALEVNLCGAGGPLRIVT-THLEFYSAAQRLAQVDALREQHREAAGHAHRPAPAETPDGP 179 Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWD-------------YYA 212 + + + + ++ Y Sbjct: 180 FAGSARALDAIVCGDFNSAYRDDAYRRITAPIAGAPDLVDAWVQAHPGQTPPPTAGVYDT 239 Query: 213 DSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + W + D + ++ + ID G T+ SDH P+++ L Sbjct: 240 EQWQDGA-MTCDFVFVTDTLAKRIVRCEID----GATRASDHQPILLEL 283 >gi|207080050|ref|NP_001128793.1| DKFZP459I087 protein [Pongo abelii] gi|55728462|emb|CAH90974.1| hypothetical protein [Pongo abelii] Length = 212 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 5/63 (7%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73 R N+ IK + D++CLQE ++ ++ E L+SL YH E + Sbjct: 31 RFPNILKEIKHFDADVLCLQEV--QEDHYGAEIRPSLESLGYHCEYKMRTGRKPDGCAIC 88 Query: 74 YQP 76 ++ Sbjct: 89 FKH 91 >gi|242827232|ref|XP_002488790.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500] gi|218712046|gb|EED11474.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500] Length = 1907 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 20/56 (35%), Gaps = 3/56 (5%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278 ID + S + + S DTKP W DH P+ D+ R N Sbjct: 803 IDLVWASHNLANRVVSC--DTKPEWWYGA-DHVPISTQFDLTAIRVPPLVRKQWNA 855 >gi|161522526|ref|YP_001585455.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans ATCC 17616] gi|189348598|ref|YP_001941794.1| metal-dependent hydrolase [Burkholderia multivorans ATCC 17616] gi|221211889|ref|ZP_03584867.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans CGD1] gi|160346079|gb|ABX19163.1| Endonuclease/exonuclease/phosphatase [Burkholderia multivorans ATCC 17616] gi|189338736|dbj|BAG47804.1| metal-dependent hydrolase [Burkholderia multivorans ATCC 17616] gi|221167974|gb|EEE00443.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans CGD1] Length = 278 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 12/62 (19%) Query: 4 VTVATWNVNS------IRARIHNLAAWIKENNPDIICLQE-----TKTEDKNFPFETLQS 52 + +AT+N++ RA + +AA I E + D+I LQE T+ D P Sbjct: 29 LRIATYNIHGGHGPWHARA-VDRIAAVIDELDADVIALQEVPLGGTRAPDVLAPLRDATG 87 Query: 53 LN 54 ++ Sbjct: 88 MH 89 Score = 35.9 bits (81), Expect = 6.7, Method: Composition-based stats. Identities = 10/37 (27%), Positives = 15/37 (40%), Gaps = 3/37 (8%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 +D I + P LL + R SDH P++ Sbjct: 216 LDRIWVHPG--ELLVDVVVHRSARAR-HASDHYPLVA 249 >gi|110737963|dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thaliana] Length = 910 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 42/271 (15%), Positives = 84/271 (30%), Gaps = 27/271 (9%) Query: 4 VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + V WN+ + +R + +WI NN + C ET +N + Sbjct: 1 MKVFCWNIRGLNSRNRQRVVRSWIASNNLLVGCFLETHVAQEN------------ANSVL 48 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 + G + S Y E+ D + + T I +++I +L Sbjct: 49 ASTLPGWRMDSNYCCSELGRIWIVWDPSISVLVFKRTDQIMFCSIKIPSLLQSFA----- 103 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + + L L + ++ + +L + Sbjct: 104 VAFVYGRNSELDRRSLWEDILVLSRTSPLSVTPWLLLGDFNQIAAASEHYSINQSLLNLR 163 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR-IDHIMLSPEATSLLHSAR 240 + LQ + +++ ++ N +R +D + + E ++ SA Sbjct: 164 GMEDLQCCLRDSQLSDLPSRGVFFTW----SNHQQDNPILRKLDRALANGEWFAVFPSAL 219 Query: 241 IDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271 P G SDH P I+ +D P K+ Sbjct: 220 AVFDPPGD---SDHAPCIILIDNQPPPSKKS 247 >gi|241888840|ref|ZP_04776146.1| lpxtg cell wall surface protein [Gemella haemolysans ATCC 10379] gi|241864516|gb|EER68892.1| lpxtg cell wall surface protein [Gemella haemolysans ATCC 10379] Length = 866 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 14/81 (17%), Positives = 32/81 (39%), Gaps = 10/81 (12%) Query: 199 HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT---KPSDHT 255 H+ YS++ Y + S +D++++S + + + + SDH Sbjct: 576 HEQGDRYSYF-YRGSNQS------LDNVLISKNIKDKVVFSPVHINASFMEEHGRASDHD 628 Query: 256 PVIVSLDIPEPRKKQQDSTSQ 276 PV+V +D + + + Sbjct: 629 PVVVQIDFSKSAAPESPGLNP 649 >gi|297828519|ref|XP_002882142.1| endonuclease/exonuclease/phosphatase family protein [Arabidopsis lyrata subsp. lyrata] gi|297327981|gb|EFH58401.1| endonuclease/exonuclease/phosphatase family protein [Arabidopsis lyrata subsp. lyrata] Length = 444 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 36/274 (13%), Positives = 75/274 (27%), Gaps = 37/274 (13%) Query: 13 SIRARIHNLAAWIKENNPDIICLQETKTEDKN---FPFETLQSLNY-HIETCGQKSYNGV 68 +R+ L ++E + D++ LQ+ K ++ + + +L ++ G Sbjct: 157 GLRSTRTAL-EVLRELDADVLALQDVKADEADQMRPLSDLAAALGMNYVFAESWAPEYGN 215 Query: 69 AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY---- 124 AILSK+ DD D + + + + +L H + K Sbjct: 216 AILSKWPIKSSDVLRIFDDTDFRNVLKASIEVPGSGEVEFHCTHLDHLDEKWRMKQVDAI 275 Query: 125 ----DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + E Y + +P + + +T Sbjct: 276 IRSTNVPHILAGALNSLDESDYSPERWTDIVKYYEEMGKPIPKAQVMRFLKSKEYTDAKD 335 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + + + G R+D+I+ S ++ Sbjct: 336 FAGECESVVVVAKGQSVQGTCK----------------YGTRVDYILASSDSPYRFVPGS 379 Query: 241 IDTKPRGWTKPSDHTPVIVS------LDIPEPRK 268 SDH V V +++ E R Sbjct: 380 --YSVLSSKGTSDHHIVKVDVVKARAINVDEQRP 411 >gi|149020402|ref|ZP_01835294.1| peptide chain release factor 2 [Streptococcus pneumoniae SP23-BS72] gi|303260024|ref|ZP_07345998.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pneumoniae SP-BS293] gi|303261430|ref|ZP_07347378.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pneumoniae SP14-BS292] gi|303264097|ref|ZP_07350018.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pneumoniae BS397] gi|303269531|ref|ZP_07355295.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pneumoniae BS458] gi|147930704|gb|EDK81686.1| peptide chain release factor 2 [Streptococcus pneumoniae SP23-BS72] gi|302637564|gb|EFL68051.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pneumoniae SP14-BS292] gi|302638943|gb|EFL69404.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pneumoniae SP-BS293] gi|302640916|gb|EFL71299.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pneumoniae BS458] gi|302646502|gb|EFL76728.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pneumoniae BS397] Length = 271 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 31/272 (11%), Positives = 72/272 (26%), Gaps = 14/272 (5%) Query: 4 VTVATWNVNSI--RARIHNL---AAWIKENNPDIICLQETK-------TEDKNFPFETLQ 51 + T N +S + I E + D+IC QE E + Sbjct: 1 MKFLTLNTHSWMEKEAEEKFQILLEDILEKDYDLICFQEINQEMTSSEVEVNDLYQALPA 60 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 + H + + + K + G D + I + I + + + ++ Sbjct: 61 AEPIHQDHYVRLLVEKLLEQGKNYYWTWAYNHIGYDRYHEGVAILSKTPIEAREILVSDV 120 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 P + + K + ++ ++ + Sbjct: 121 DDPTDYHTRRVALAETVVDGKELAVASVHLSWWDKGFQEEWARFEAVLKKLNKPLLLAGD 180 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 + +G DA + Y+ + +RID++ + E Sbjct: 181 FNNPAGQEGYQAILASPLGLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTTKE 240 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + + + + SDH + L+ Sbjct: 241 LA--VENLHVVFDGNKSPQVSDHYGLNAVLNW 270 >gi|126307063|ref|XP_001374687.1| PREDICTED: similar to LOC90806 protein [Monodelphis domestica] Length = 544 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 36/107 (33%), Gaps = 5/107 (4%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73 R N+ IK + DI+CLQE ++ ++ E L+SL YH E + Sbjct: 201 RFPNILREIKHMDADILCLQEV--QEDHYRKEIKPNLESLGYHCEYKMRTGRKPDGCAIC 258 Query: 74 YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 ++ + + L + + +PI Sbjct: 259 FKCSKFTLLSANPVEFYRRDIPLLDRDNVGLVLLLQPKFHCTASPIC 305 >gi|88799498|ref|ZP_01115075.1| hypothetical protein MED297_03917 [Reinekea sp. MED297] gi|88777808|gb|EAR09006.1| hypothetical protein MED297_03917 [Reinekea sp. MED297] Length = 280 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 35/277 (12%), Positives = 72/277 (25%), Gaps = 36/277 (12%) Query: 4 VTVATWNVNSI---------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 + VA+ N++ I R + A I + DI+ QE E+ Sbjct: 25 LRVASHNIHYILPNNPDDDWETRRDAVIAVIDDMAADILAFQE---------MESFVG-- 73 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT--INTQTLRIGNLY 112 + V + Q Sbjct: 74 --GVNHQNLQLDWVLEHHPDYNAGAFSDNADQFPITQPILYRRDRFSLQTQGFFFFSETP 131 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 + +Y +SW++ F + L + + Q + I + Sbjct: 132 DVIYSRQWDGRYPYFVSWVELFDHTNDRNLFVFNFHNDFASRSNRRQSSELTAERIEQIA 191 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR----IDHIML 228 + + F + S ++ G++ IDHI++ Sbjct: 192 GETPVILLGDFNAPVWFREVERFEPKLTPIKP-------GGSTNRILGLKLLPAIDHILI 244 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 S + + ++ + G PSDH P+ + + Sbjct: 245 SDDFVAD-TDVQVWDRRYGGEYPSDHFPISADIRFSD 280 >gi|86141714|ref|ZP_01060238.1| hypothetical protein MED217_01245 [Leeuwenhoekiella blandensis MED217] gi|85831277|gb|EAQ49733.1| hypothetical protein MED217_01245 [Leeuwenhoekiella blandensis MED217] Length = 279 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 33/268 (12%), Positives = 71/268 (26%), Gaps = 24/268 (8%) Query: 6 VATWNV------NSIRARIHNLAAWIKEN----NPDIICLQETKTEDKNFPFETLQSLNY 55 + T+N+ + A ++ PD++ +QE + + Y Sbjct: 24 LMTYNIRMATESDGADAWSKR-KEYLTSQVLFYAPDVMGVQE--ALPEQMDYLGKHLTGY 80 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 G++ N + + + + L D + + + + RI L Sbjct: 81 KHVGVGREGKNKGEFSAIFYNADRLKVLEDDTFWLSETPEKISTGWDAALPRICTYALFK 140 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 Y + + + N Sbjct: 141 DKKSGEKFYVFNT-----HFDHVGIEARKNASALILAKIKELNPKNLPAFVSGDLNLEPD 195 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 + + +L + A + +++ RID+I TS Sbjct: 196 SAPIAVLKTELDDTYELAPNGAFGPKG------TFNGFKFTEPVTRRIDYIFQVKSNTSK 249 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + I + + PSDH PV V + + Sbjct: 250 VLKHAILSDSKDLHYPSDHLPVYVLIAL 277 >gi|326497739|dbj|BAK05959.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 524 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 38/293 (12%), Positives = 77/293 (26%), Gaps = 62/293 (21%) Query: 2 SVVTVATWNVNS-----IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56 + V T+NV + R+H L I+ +NPD+IC QE ++ Y Sbjct: 255 KTIKVMTYNVWFREDLELTKRMHALGNLIQHHNPDLICFQEVTPNIYQLLQKSGWWQEYK 314 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 + + + + + + + IN + L H Sbjct: 315 CSLSARMAMQRQYYCMQMSKLPVNSFNCIPFSNSVMERELCVGDINIGGVTKMVLATSHL 374 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + + + + + + +D Sbjct: 375 ESPCAWNQMYSKERVVQANASMRILDKFRNVIFCGD---------------MNWDDKGDG 419 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW-SKNKGI--RIDHIMLSPEAT 233 G+ DA +++ D A+ + N+ + R+D + Sbjct: 420 PFPLP-------NGWIDAWAELKPGEDGWTY-DTRANGMLAGNRKLQKRLDRFVC----- 466 Query: 234 SLLHSARID------------------TKPRGWTK-------PSDHTPVIVSL 261 L ID R + PSDH +++S+ Sbjct: 467 -KLPDFEIDSIEMIGKEAIPGISHYKEKTVRKVVQNIEYPVLPSDHFGLVLSI 518 >gi|270295395|ref|ZP_06201596.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270274642|gb|EFA20503.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 283 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 41/276 (14%), Positives = 80/276 (28%), Gaps = 40/276 (14%) Query: 6 VATWNV---------NSIRARIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQS--L 53 V ++N+ N+ + R N A I PDI+ +QE K + + Q L Sbjct: 30 VMSFNIRLDHVADSMNNWKYRKDNAAQMIAYYAPDIVGMQEVVKNQLNDLKERLPQYTAL 89 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 +K + + G + + + + + Sbjct: 90 GVGRADGKEKGEYCSLFYKTERFELLKNGDFGLSETPDSIGKKGWDAACERIVT-WAVLK 148 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + ++ + R S +L LE+ AG+ + Sbjct: 149 DKVSGRKVAAFNTHFDHVGEVARRESAKLILEKIKQIAGEL-------PVIITGDFNGTV 201 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR-IDHIMLSPEA 232 + ++N T + W ++ + R ID I ++ Sbjct: 202 DSEPVTILTEGGMRNACSTAKVVYGPT-------WSFHDFGRIPVEKRRLIDFIFVNA-- 252 Query: 233 TSLLHSARIDTKPRGWTKP-----SDHTPVIVSLDI 263 S ++ KP SDH PV+V+L + Sbjct: 253 -----SVEVERYRTVGDKPDNGYLSDHAPVLVTLKL 283 >gi|251800194|ref|YP_003014925.1| endonuclease/exonuclease/phosphatase [Paenibacillus sp. JDR-2] gi|247547820|gb|ACT04839.1| Endonuclease/exonuclease/phosphatase [Paenibacillus sp. JDR-2] Length = 264 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 33/244 (13%), Positives = 68/244 (27%), Gaps = 10/244 (4%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQP 76 R+ I++++P +I QE ++ Y G+ + + + Sbjct: 26 RVDRATNVIRKHHPLLIGTQE--GYHSMLKDLEIELYEYDWVGRGRFGEHENEHNAIFYN 83 Query: 77 IEIVTHLPGDDLDVQARFIEATFTINTQTL-RIGNLYLPHGNPITSTKYDDKISWIKRFL 135 + +T + + RI H + Y Sbjct: 84 RDELTVEENGQFWLSETPESEASVSWDSSFPRICTWARFHHRRSGKSFYLYNTHLDHHSQ 143 Query: 136 RFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAI 195 + +++ + + + + + + G TDA Sbjct: 144 EAKDRGIQVIGEYMAKQRALDGLPALLTGDFNSYPGEFPIRFLRGEIEIDGKKSGLTDAY 203 Query: 196 RATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHT 255 + L +F + + G ID+I + E S +ID PSDH Sbjct: 204 SQIAENPGL-TFHSFKGG----DSGEPIDYIFATAEF--QFLSVQIDRSQVNGRYPSDHY 256 Query: 256 PVIV 259 PV+ Sbjct: 257 PVVA 260 >gi|49083150|gb|AAT50960.1| PA5488 [synthetic construct] Length = 293 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 34/290 (11%), Positives = 72/290 (24%), Gaps = 67/290 (23%) Query: 4 VTVATWNVN-SI---------------------RA-RIHNLAAWIKENNPDIICLQETKT 40 + + ++N+ I RA + + + + D++ LQE Sbjct: 35 LRLLSFNIQVGISTERYRHYLTRGWQHLLPHAGRATNLKRIGELLA--DYDLVALQE--- 89 Query: 41 EDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT 100 + Q + Q Sbjct: 90 ----------------------ADGGSLRSGYVNQVEHLAQLGAFPYWYQQLNRNLGRIA 127 Query: 101 INTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP 160 ++ L + + + RF A + + L Sbjct: 128 QHSNGLLSRWRPTLLEDHPLPGP-PGRGAIFVRFGEGADALVVVMMHLALGARTRTRQLA 186 Query: 161 HDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG 220 + + + + L+N D +F + +N Sbjct: 187 YIRELIGDYRHQVLMGDMNTHAVDLLENSPLRDLGLMAPQVEA--TFPSWRP---QRN-- 239 Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQ 270 +DHI+LS + L + +P SDH PV V + +P+ + + Sbjct: 240 --LDHILLSSDLA--LERVDVLDQP-----ISDHLPVSVEIRLPDNLRDK 280 >gi|15010430|gb|AAK77263.1| GH03753p [Drosophila melanogaster] Length = 888 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 40/259 (15%), Positives = 73/259 (28%), Gaps = 40/259 (15%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 M+ + ++ WN N + L +I E N D++ L ET +KN Y Sbjct: 1 MASLRISLWNANGVSRHTQELTQFIYEKNIDVMLLSETHLTNKN----NFHIPGYLFYGT 56 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 I H + + +N + + +Y P PI+ Sbjct: 57 NHPDGKAHGGTGILIRNRIKHHHLNNFDKNYLQSTSIALQLNNGSTTLAAVYCPPRFPIS 116 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 ++ L + I AGDYN Sbjct: 117 EDQF-------------MEFFNTLGDRFIAAGDYNAKHTHWGSRLVTPKGK--------- 154 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 +L N + + + ++W + + ID ++ + +A Sbjct: 155 ----QLYNALTKPENKLDYVSPGKPTYWP----ADPRKIPDLID-FAITKHVPRNMVTAE 205 Query: 241 IDTKPRGWTKPSDHTPVIV 259 SDH+PV + Sbjct: 206 ALADLS-----SDHSPVFL 219 >gi|304382431|ref|ZP_07364930.1| AP endonuclease domain protein [Prevotella marshii DSM 16973] gi|304336439|gb|EFM02676.1| AP endonuclease domain protein [Prevotella marshii DSM 16973] Length = 362 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 40/248 (16%), Positives = 74/248 (29%), Gaps = 25/248 (10%) Query: 21 LAAWIKENNPDIICLQE--TKTEDKNFPFETLQSL-NYHIETCGQKSYNGVAILSKYQPI 77 +A I + NPDI+CLQE K P + + L + + L+ + Sbjct: 123 IADDIIKANPDILCLQEASLKFP---IPSDVMHRLKKQYAYCDTTYKGRDGSCLALFSKF 179 Query: 78 EIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF 137 I++ + + I+ T+ + N + + + + K + Sbjct: 180 PILSRKQIRYKSIYNMSMAYMLNIHGDTVIVINNHFEGTGLTLNERREFKRMLKGELKAY 239 Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA 197 +++ A D + N + + T Sbjct: 240 MARKESQRLIDRLATSTATRAPQADSVAAFVKANKRHSIILCGDFNDNPLSYTRTTLGDV 299 Query: 198 THDTH------HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP 251 D + S+ D +RID+IM S E ++D K K Sbjct: 300 LTDCYIATGNGPGISYHDNRMY-------VRIDNIMCSDEWIPYA--CKVDNKM----KH 346 Query: 252 SDHTPVIV 259 SDH P+ Sbjct: 347 SDHYPIYC 354 >gi|281341958|gb|EFB17542.1| hypothetical protein PANDA_012468 [Ailuropoda melanoleuca] Length = 130 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 36/104 (34%), Gaps = 12/104 (11%) Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 E + L + D R H YSF+ ++S RIDH + S Sbjct: 24 ESKALNAILDELDLIDIYRTLHPRTKEYSFYSNAHGTFS-----RIDHALGHKTGLSQYQ 78 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 I SDH + + L+ K ++S + ++ I Sbjct: 79 KIEIIPCI-----FSDHNALKLELN--HKEKPGRNSNTWRLRTI 115 >gi|242825331|ref|XP_002488418.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500] gi|218712236|gb|EED11662.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500] Length = 1110 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 20/56 (35%), Gaps = 3/56 (5%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278 ID + S + + S DTKP W DH P+ D+ R N Sbjct: 181 IDLVWASHNLANRVVSC--DTKPEWWYGA-DHVPISTQFDLTAIRVPPLVRKQWNA 233 >gi|242775759|ref|XP_002478704.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500] gi|218722323|gb|EED21741.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500] Length = 1181 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 20/56 (35%), Gaps = 3/56 (5%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278 ID + S + + S DTKP W DH P+ D+ R N Sbjct: 181 IDLVWASHNLANRVVSC--DTKPEWWYGA-DHVPISTQFDLTAIRVPPLVRKQWNA 233 >gi|194208445|ref|XP_001501284.2| PREDICTED: similar to CCR4 carbon catabolite repression 4-like [Equus caballus] Length = 450 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 37/263 (14%), Positives = 65/263 (24%), Gaps = 28/263 (10%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFE--TLQSLNYHIETCGQKSYNGVAILSKYQPIE 78 + I PDI+CLQE D F L L Y + S +E Sbjct: 198 ILEEILAYQPDILCLQEV---DHYFDTFQPLLSRLGYQGTFFPKP-------WSPCLDVE 247 Query: 79 IVTHLPGD--DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 G + + I + + + + + + L+ Sbjct: 248 HNNGPDGCALFFLQNRFKLVNSANIRLTAMTLKTNQVAIAQTLECKESSRQFCIAVTHLK 307 Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN----MGFT 192 + N+ P+I D + Sbjct: 308 ARTGWERFRSAQGCDLLQNLQNITQGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAY 367 Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP------EATSLLHSARIDTKPR 246 + A + Y+ W ++ +D+I S A LL +I Sbjct: 368 KLLSADGQSEPPYTTWKIRTSGECRHT---LDYIWYSKHALSVRSALDLLTEEQIGPNRL 424 Query: 247 -GWTKPSDHTPVIVSLDIPEPRK 268 + PSDH ++ E Sbjct: 425 PSFNYPSDHLSLVCDFSFNEEPD 447 >gi|308813644|ref|XP_003084128.1| exodeoxyribonuclease (ISS) [Ostreococcus tauri] gi|116056011|emb|CAL58544.1| exodeoxyribonuclease (ISS) [Ostreococcus tauri] Length = 1557 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 43/136 (31%), Gaps = 16/136 (11%) Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY-NPIIWENDACFTLEVRQS 182 ++ +R +R L+ +P+I+ GD N+ + D + A FT E R + Sbjct: 99 LRERTETWERAMRAHLCELKKAKPVIYCGDLNVAHEEIDLWGRHKENAKSAGFTPEERSA 158 Query: 183 FQKL-QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 L D+ R H Y+ + + A I Sbjct: 159 MSTLLSECELVDSFRHKHPDKRAYT--SIADGDSIT--------FSSTRRLADSIVDAEI 208 Query: 242 DTKPRGWTKPSDHTPV 257 G SDH PV Sbjct: 209 YPDVTG----SDHCPV 220 >gi|56460629|ref|YP_155910.1| extracellular nuclease [Idiomarina loihiensis L2TR] gi|56179639|gb|AAV82361.1| Extracellular nuclease [Idiomarina loihiensis L2TR] Length = 589 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 35/310 (11%), Positives = 78/310 (25%), Gaps = 67/310 (21%) Query: 4 VTVATWNV------NSI-------RAR---------IHNLAAWIKENNPDIICLQETKTE 41 + +A++NV N + R + A + + D+I L E E Sbjct: 288 LRIASFNVLNFFNGNGVGQGFPTPRGADTPEQMQRQQKKIVAALTAIDADVIGLMEI--E 345 Query: 42 DKNF-----------PFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDV 90 + F E +Y I + I + + I+ + Sbjct: 346 NDGFGERSAIMQLVKALEKASGKDYAIAEPRAEK-----IGTDQITVGIIYQPQRVKPNS 400 Query: 91 QARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIF 150 A F + ++ + + + + Sbjct: 401 HAIFTRQGPFSWGSRPPLAQSFIDANTGKEFSVVVNHFKSKGSCPEDSESPNSNQNDGQA 460 Query: 151 AGD--YNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF- 207 + + + ++ + +Q+ F D YS+ Sbjct: 461 CWNDLRLQSSRELIQWIQSESLANSVLLGDFNAYYQEDPVRYFADNGFYNPSGAKDYSYV 520 Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID---------TKPR-------GWTKP 251 +D A + +DH+ ++ + R G + Sbjct: 521 YDSQAGA--------LDHVFVTDSLKDAIQEVYHLPFNADEPQLYDYRDEAYFAEGPFRS 572 Query: 252 SDHTPVIVSL 261 SDH P+++ L Sbjct: 573 SDHDPLVLDL 582 >gi|327395006|dbj|BAK12428.1| endonuclease/exonuclease/phosphatase [Pantoea ananatis AJ13355] Length = 371 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 32/112 (28%), Gaps = 26/112 (23%) Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY--SFWDYYADSWSKNKGIRIDHIML 228 D T + L+ D + Y ++ + NK ID+I+L Sbjct: 267 GDFNDTPDSEALAPLLKETDLKDIFTHEKFDNGGYPGTW----GGCSASNK---IDYILL 319 Query: 229 SPEATSLLHSARIDTKPR-------GWTK----------PSDHTPVIVSLDI 263 SP + + K W SDH V V L I Sbjct: 320 SPALWKKVEKGGVWRKGMWPGVRPVKWETYPELKKEVNAASDHAAVWVDLKI 371 >gi|291618627|ref|YP_003521369.1| Hypothetical Protein PANA_3074 [Pantoea ananatis LMG 20103] gi|291153657|gb|ADD78241.1| Hypothetical Protein PANA_3074 [Pantoea ananatis LMG 20103] Length = 371 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 32/112 (28%), Gaps = 26/112 (23%) Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY--SFWDYYADSWSKNKGIRIDHIML 228 D T + L+ D + Y ++ + NK ID+I+L Sbjct: 267 GDFNDTPDSEALAPLLKETDLKDIFTHEKFDNGGYPGTW----GGCSASNK---IDYILL 319 Query: 229 SPEATSLLHSARIDTKPR-------GWTK----------PSDHTPVIVSLDI 263 SP + + K W SDH V V L I Sbjct: 320 SPALWKKVEKGGVWRKGMWPGVRPVKWETYPELKKEVNAASDHAAVWVDLKI 371 >gi|224026812|ref|ZP_03645178.1| hypothetical protein BACCOPRO_03569 [Bacteroides coprophilus DSM 18228] gi|224020048|gb|EEF78046.1| hypothetical protein BACCOPRO_03569 [Bacteroides coprophilus DSM 18228] Length = 288 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 37/267 (13%), Positives = 76/267 (28%), Gaps = 23/267 (8%) Query: 7 ATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57 AT+N+ N+ + R +AA+IK N DI+ +QE L+ L + Sbjct: 33 ATFNIRYDNPADSLNNWKYRKDTVAAFIKANQLDIVGMQEV-------LHNQLEDLKQRL 85 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 + ++ + + + F + ++ + Sbjct: 86 PEYAEVGVGREDGKTQGEYAPLFYRKDRFEALDSNTF-WLSQYPDSVGFIGWDGACTRIA 144 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 K I + ++ + Sbjct: 145 TWAKLKDRKTGKIFMAVNTHFDHIGVEARKNSALLIIQKIKEIVGDQPAVLTGDFNVSDQ 204 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHH-LYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 + + DA + Y+F D +K +ID I ++P+ + Sbjct: 205 WDAYTTITTNSFVLKDAYKIADKQEGVNYTFHD--FGREPIDKREKIDFIFVTPQI--KV 260 Query: 237 HSARIDTKPRGWTKP-SDHTPVIVSLD 262 I + +G T SDH P + +L+ Sbjct: 261 KDTSIPQESQGETGFLSDHNPQLATLE 287 >gi|219112079|ref|XP_002177791.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217410676|gb|EEC50605.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 580 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 27/89 (30%), Gaps = 26/89 (29%) Query: 4 VTVATWNVNSIRA---RIH------------------NLAAWIKENNPDIICLQETKTED 42 + + +WNV + RIH LA +++ + DI CLQE K Sbjct: 1 MLILSWNVAGLSTTVNRIHSSYDSPAPKGTKRQPTSAALARFLELHGADIACLQEHKIPK 60 Query: 43 KNF-----PFETLQSLNYHIETCGQKSYN 66 + P Y N Sbjct: 61 QQLSSKSEPRHCSNVTGYESFWSCCVDNN 89 Score = 44.0 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 10/65 (15%), Positives = 23/65 (35%), Gaps = 1/65 (1%) Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 + LQ+ D R + ++ W+ + N G RID+ ++ + Sbjct: 338 PTRKWLSTVLQDDDMVDVFRYHFPSAEARFTCWNQSLNRRYFNDGSRIDYTIVDRCLMNR 397 Query: 236 LHSAR 240 + + Sbjct: 398 VADSE 402 >gi|290971386|ref|XP_002668488.1| predicted protein [Naegleria gruberi] gi|284081918|gb|EFC35744.1| predicted protein [Naegleria gruberi] Length = 174 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 3/41 (7%) Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 RID+++ + E L + ID+ G SDH PV+V + Sbjct: 136 RIDYVISNTELEPYLKQSWIDSDASGI---SDHLPVVVLFE 173 >gi|260173227|ref|ZP_05759639.1| Endonuclease/exonuclease/phosphatase [Bacteroides sp. D2] gi|315921500|ref|ZP_07917740.1| metallophosphoesterase [Bacteroides sp. D2] gi|313695375|gb|EFS32210.1| metallophosphoesterase [Bacteroides sp. D2] Length = 263 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 39/271 (14%), Positives = 73/271 (26%), Gaps = 56/271 (20%) Query: 4 VTVATWNVNSIR----ARIHNLAAWIKENNPDIICLQET------KTEDKNFPFETLQSL 53 V V T+N +R A + LA IK PD + LQE K + + L Sbjct: 27 VRVMTYN---LRFGELASLEELAHHIKSFKPDFVALQEVDSKTDRKRTPHQKGKDFISEL 83 Query: 54 NYH--IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 YH + K+ + + ++ + + E + L Sbjct: 84 AYHTGMFGLYGKTIDYSTGYYGIGMLSKYPYISVQKIMLPHPVKEHERRAMLEGL-FEMG 142 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 T + + + ++ + P+I GD+N W Sbjct: 143 NDTIVFTSTHLDVNSQETRAEQIKFITGHFKNYKYPVILGGDFNARHYSEVIRGMDSWFA 202 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 + + ++ ID++ P+ Sbjct: 203 ASNDDFGMPAWKPVIK-----------------------------------IDYLFAYPQ 227 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + S + SDH P+I L+ Sbjct: 228 KGWRVISTQTVQSLL-----SDHLPIITELE 253 >gi|154274920|ref|XP_001538311.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] gi|150414751|gb|EDN10113.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1] Length = 492 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 52/346 (15%), Positives = 90/346 (26%), Gaps = 66/346 (19%) Query: 2 SVVTVATWNVNSIRA----RIHNLAAW-----IKENNPDIICLQETKTEDK--NFPFETL 50 + + + T N ++ R L + EN P I+ LQE + + N ET Sbjct: 11 AKINILTLNCWGLKYISEYRRERLIEIGKRIALSENTPHIVGLQECWSREDYHNIRRETR 70 Query: 51 QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ---TLR 107 + L Y G+AILSK+ E H + A F + +R Sbjct: 71 EILPYGKFYFSGIFGGGLAILSKWPIEESTMHTYPLNGRPSAIFRGDWYVGKGVACARIR 130 Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP--------- 158 IG + + + + E + Sbjct: 131 IGPAAADIVDVFCTHLHAPYEREPRDSYICHRTAQAWEIAKLMKAAAEKGHLVVGLGDFN 190 Query: 159 -----------------QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT 201 + Y A + + + F + Sbjct: 191 MLPQSFAHRLITSHAPVKDVWGYLHPDSSIGAAIDSAEMNRKKPVPSADFNISENGATCD 250 Query: 202 HHLYSF-WDYYADSWSKNKG-------------IRIDHIML-------SPEATSL-LHSA 239 L ++ W K +G R+D+I + P + SA Sbjct: 251 SILNTWRWSKSQQKRLKREGPMPVDGQRPDPLAKRLDYIFVGDGSFSNPPPLRKWDIESA 310 Query: 240 RI---DTKPRGWTKPSDHTPVIVSLDIP-EPRKKQQDSTSQNMKPI 281 R+ + P SDH V ++ + D + PI Sbjct: 311 RVCMLERHPHLHCSLSDHFGVEATIKLDIAKEADDGDEGPSSFLPI 356 >gi|18310037|ref|NP_561971.1| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens str. 13] gi|18144716|dbj|BAB80761.1| hypothetical protein [Clostridium perfringens str. 13] Length = 256 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 40/249 (16%), Positives = 70/249 (28%), Gaps = 21/249 (8%) Query: 20 NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEI 79 + IK++ PDII QE + + L ++ + + + + + Sbjct: 23 RITKLIKDHLPDIIGTQEGLIHMLDDMDDLLDEYSW-VGEDREGNGKDEFNAIFFLNNKF 81 Query: 80 VTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIK-----RF 134 + I+ + N+ RI R Sbjct: 82 EVLEWDQFWLSKTPNIKGSKDFNSSLPRICTKLKLKDKISGLKIDIYNTHLDHESELARE 141 Query: 135 LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDA 194 E+++ II +CY N F + + Sbjct: 142 EGIKIILKEVKKNYSIEKTPYIIMGDFNCYLEDNLFNIIREEETNNTCFNVCYDNIKNNI 201 Query: 195 IRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDH 254 + H Y +G ID+I+ S E + S ID + PSDH Sbjct: 202 LGTFHYFKGGY-------------EGKIIDYILYSKEYE--IKSLNIDDRKIDGGYPSDH 246 Query: 255 TPVIVSLDI 263 PVI L++ Sbjct: 247 YPVICELEL 255 >gi|308458017|ref|XP_003091362.1| hypothetical protein CRE_16479 [Caenorhabditis remanei] gi|308257153|gb|EFP01106.1| hypothetical protein CRE_16479 [Caenorhabditis remanei] Length = 925 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 44/280 (15%), Positives = 91/280 (32%), Gaps = 25/280 (8%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENN---PDIICLQETKTEDKNFPFETLQSLNYHIETC 60 + + T+N S+ A + LA ++E N DII L ETK + + Sbjct: 21 LRICTFNCRSV-ATDNRLAELLEETNRIKYDIIGLSETKRSAE---VHMTNRDGTRVI-L 75 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 G+++ + V+ + + + + V R T +N I Y P + Sbjct: 76 GKRNDSSVSGGVGFIINKSLMPKIKEIKIVSHRIGYLTLQVNKNQYTIIQGYAPTADYEE 135 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + + + S+ + + + + ND+ E R Sbjct: 136 EDHSNFYENLEDVYKSCKSRYKMVIGDFNARIGERKGNEVFIGPHSMENRNDS----EER 191 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + N F + TH +++ + +DHI+ + + Sbjct: 192 LATFCEVNRVFHMNSQFIKPTHRRWTYISPDKQHRHE-----LDHILANG---KYITDVS 243 Query: 241 IDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 + +T SDH + ++ I + K + + KP Sbjct: 244 V---VPSFTNGSDHRMLRANVHINAKQAKFEQV--KRRKP 278 >gi|302761446|ref|XP_002964145.1| hypothetical protein SELMODRAFT_405855 [Selaginella moellendorffii] gi|300167874|gb|EFJ34478.1| hypothetical protein SELMODRAFT_405855 [Selaginella moellendorffii] Length = 589 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 31/99 (31%) Query: 139 SQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT 198 + L+ +I G NI P P D +P + R Sbjct: 267 CRILKRGRRIIIVGHLNISPYPIDSCDPGPKFDTDPSRQWFRSLLVSEGGAFSDSFRVFH 326 Query: 199 HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 + Y+ W + + N G RIDH++++ Sbjct: 327 PEIAEAYTCWSQASGAEEFNYGSRIDHVLIAGPCAGHCQ 365 >gi|222086336|ref|YP_002544869.1| endonuclease/exonuclease/phosphatase family protein [Agrobacterium radiobacter K84] gi|221723784|gb|ACM26940.1| endonuclease/exonuclease/phosphatase family protein [Agrobacterium radiobacter K84] Length = 370 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 49/310 (15%), Positives = 91/310 (29%), Gaps = 77/310 (24%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNY-----------------------HIETCG 61 I + N DIICLQE D + + Y + Sbjct: 66 IADANADIICLQEV---DSMAALQAFE-YGYLYRMVGNGYRQKFLIEGNDSRGIDVAVMM 121 Query: 62 QKSYNG---VAILSKYQPIEIVT-------------HLPGDDLDVQARFIEATFTINTQT 105 ++ + + + + L DD + +E TI Sbjct: 122 REQTSDGQPIVLKDIKSHAMVTYRDFDLFTDELAALGLHEDDKIFKRDCLELDLTIGGVP 181 Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELE----------EPLIFAGDYN 155 + ++L P + + R + R +E + GD N Sbjct: 182 FSLYVVHLKSMGPAREGVDGRQSTMPVRRAETLAVRHIIETRFGAGHTAAKNFAICGDMN 241 Query: 156 IIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW 215 + D E + + GF + + D ++ Y+A Sbjct: 242 DYQERVDVIGTRHTGYRFEHRDEEASALDVFSHDGFVENVMRRRDELDRWTL--YHARGP 299 Query: 216 SKNKGIRIDHIMLSPEAT--------SLLHSA-----------RIDTKPR-GWTKP--SD 253 + ++D+I LSP ++ S ++ PR GW +P SD Sbjct: 300 QEQWLCQLDYIWLSPALARANAARLPDVVRSGQPFRTIFPPGQEVERYPRTGWDRPKASD 359 Query: 254 HTPVIVSLDI 263 H P++++LD+ Sbjct: 360 HCPIVMTLDL 369 >gi|166367334|ref|YP_001659607.1| hypothetical protein MAE_45930 [Microcystis aeruginosa NIES-843] gi|166089707|dbj|BAG04415.1| hypothetical protein MAE_45930 [Microcystis aeruginosa NIES-843] Length = 260 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 49/277 (17%), Positives = 81/277 (29%), Gaps = 33/277 (11%) Query: 4 VTV--ATWNV----------NSIRARIHNLAAWIKENNPDIICLQETKTE---DKNFPFE 48 + + ++N+ N R R +AA I +PDII QE + D + Sbjct: 1 MKLTAMSFNIRYDKPDPDEGN-WRVRREAVAALIAHYSPDIIGTQEARANQLLDLHRLLP 59 Query: 49 TLQSLNYHIETCGQKSYNGVAIL-SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107 QSL G + + S+ + +EI + DV EA + + Sbjct: 60 KYQSLGSDRRRTGLDEHCAILYQPSRLKCLEIYEFWLSETPDVIGSITEAWGNPYPRMVT 119 Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167 G + + A E L DY + + + Sbjct: 120 GAKFRTLEGQTLQFYNTHLDYYSDQAKDLGAKCIQERFCQLDLTKDYLFLTGDFNVNSQQ 179 Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227 + L+ + + + Y+ Y A ID I Sbjct: 180 LPRQILTQPLQPEIKLKDALADLELAEQMSFN----NYTDTPYLA----------IDTIY 225 Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 L A++D PSDH PVI + +P Sbjct: 226 YDSRL--QLDWAKVDPSRWLNLIPSDHYPVIAAFTLP 260 >gi|46109934|ref|XP_382025.1| hypothetical protein FG01849.1 [Gibberella zeae PH-1] Length = 298 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 35/285 (12%), Positives = 79/285 (27%), Gaps = 38/285 (13%) Query: 4 VTVATWNVNSIRARIHNLAA----WIKE---------------NNPDIICLQETKTEDKN 44 + + T+NV R W + +P ICLQE Sbjct: 25 LRIVTFNV---RYATKKFEKNERPWAERRPKLINQLNFITAGHESP-FICLQE--CLFHQ 78 Query: 45 FPFETLQSLN--YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN 102 E + L + G+ + S + + ++ ++ E Sbjct: 79 V-NEIQEDLGSKWQHIGRGRGTKPEDGEFSPIFYRDDIWKNVRSEVRWLSKTPEKPSRGW 137 Query: 103 TQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD 162 L + + + S + +++ + + FA ++ + Sbjct: 138 DAVLN-RIVTMAEFEHRVTATRVVVFSTHFDHIGVEARQNSAKLLVKFAREWGQA--GNK 194 Query: 163 CYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY---SFWDYYADSWSKNK 219 + ++ D + + Y + + + +W Sbjct: 195 KASAVLIGGDFNSEPDDGAYKTITAPGSGISDVSDLVPKEKRYGNETTYTSFGGTWPT-- 252 Query: 220 GIRIDHIMLSPEATSLLHSARIDTKPRG-WTKPSDHTPVIVSLDI 263 RID + + T+ + + + + SDH PV+ LDI Sbjct: 253 -SRIDFLFIQEPRTATVQTFGVLANSFDDGVRISDHRPVVSDLDI 296 >gi|281351494|gb|EFB27078.1| hypothetical protein PANDA_003930 [Ailuropoda melanoleuca] Length = 126 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 36/104 (34%), Gaps = 12/104 (11%) Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 E + L + D R H YSF+ ++S RIDH + S Sbjct: 20 ESKALNAILDELDLIDIYRTLHPRTKEYSFYSNAHGTFS-----RIDHALGHKTGLSQYQ 74 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 I SDH + + L+ K ++S + ++ I Sbjct: 75 KIEIIPCI-----FSDHNALKLELN--HKEKPGRNSNTWRLRTI 111 >gi|281341454|gb|EFB17038.1| hypothetical protein PANDA_019334 [Ailuropoda melanoleuca] gi|281341456|gb|EFB17040.1| hypothetical protein PANDA_019336 [Ailuropoda melanoleuca] gi|281344570|gb|EFB20154.1| hypothetical protein PANDA_016448 [Ailuropoda melanoleuca] gi|281352810|gb|EFB28394.1| hypothetical protein PANDA_010376 [Ailuropoda melanoleuca] gi|281353180|gb|EFB28764.1| hypothetical protein PANDA_014303 [Ailuropoda melanoleuca] gi|281354095|gb|EFB29679.1| hypothetical protein PANDA_017539 [Ailuropoda melanoleuca] Length = 126 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 36/104 (34%), Gaps = 12/104 (11%) Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 E + L + D R H YSF+ ++S RIDH + S Sbjct: 20 ESKALNAILDELDLIDIYRTLHPRTKEYSFYSNAHGTFS-----RIDHALGHKTGLSQYQ 74 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 I SDH + + L+ K ++S + ++ I Sbjct: 75 KIEIIPCI-----FSDHNALKLELN--HKEKPGRNSNTWRLRTI 111 >gi|224045985|ref|XP_002194287.1| PREDICTED: hypothetical protein [Taeniopygia guttata] Length = 311 Score = 48.2 bits (113), Expect = 0.001, Method: Composition-based stats. Identities = 37/273 (13%), Positives = 75/273 (27%), Gaps = 43/273 (15%) Query: 6 VATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 + TWN++ + RAR + ++ +PD++ LQE + P +++ NY I Sbjct: 65 LITWNIDGLDLGNVKDRAR--GICTYLALYSPDVVFLQEV--IPPHLPLLQMKAGNYTII 120 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 Y ++ L T + L + Sbjct: 121 PGNIDEY----------FTAVMLKKSRVKLLKHDIIPFPTTAMKRNLLVVHVSISGIELC 170 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + ++ + + K ++ + + I+ D Sbjct: 171 LMTSHLESTKNHSKERIKQLQIVFNEMQKESESTTV-------------IFGGDTNLRDS 217 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK---NKGIRIDHIMLSPE---- 231 L + H Y+ WD +++ +R D I P Sbjct: 218 EVTKLGNLPDNIKDAWEFLGKPQHCRYT-WDTQSNTNLNAAYKCKMRFDRIYFRPAVEGG 276 Query: 232 -ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 K PSDH ++ + D+ Sbjct: 277 HFIPRSMDLIGLEKLECGRFPSDHWGILCNFDV 309 >gi|308095136|ref|ZP_07663177.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus Peru-466] gi|308089221|gb|EFO38916.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus Peru-466] Length = 434 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 40/283 (14%), Positives = 80/283 (28%), Gaps = 43/283 (15%) Query: 4 VTVATWNVNSIRA-------RIHNLAAWIKENNPDIICLQETKTE-DKNFPFETLQSLNY 55 + + T+N+ ++ A R + ++K D++ QE F E + Y Sbjct: 170 LKLMTYNIWALPAIASHIGDRYELIPDYVK--GYDVLAFQEVFASGRDAFLRELAKEYPY 227 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + + +N + + + I H Sbjct: 228 QTKMLDKDGFNVYDGGVIIVSRYPIVNEAQYVFPDCSGTDCFADKGVNYAEIIKGGQAYH 287 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + +D + R +F R A NI Y+ N Sbjct: 288 VFATHTASFDTDTAREYRQRQFQQMR-------TMAQSLNIPNNETVVYSGDFNVNK--- 337 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYS--FWDYYADSWS-------KNKGIRIDHI 226 + A + Y+ +D ++++ +N +D++ Sbjct: 338 ------LKFPGDYQQMIANLSAMEPQYSGYTASTFDPRINNFAGEALSGGENVEY-LDYV 390 Query: 227 MLSPEA-TSLLHSARID---TKPRGWTKP---SDHTPVIVSLD 262 M+S E + R+D + G K SDH PV + Sbjct: 391 MVSNEYGVKSFNDNRVDVPRSTAEGLWKHYNLSDHFPVSAVIK 433 >gi|153832821|ref|ZP_01985488.1| metal-dependent hydrolase [Vibrio harveyi HY01] gi|148870955|gb|EDL69845.1| metal-dependent hydrolase [Vibrio harveyi HY01] Length = 287 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 41/290 (14%), Positives = 79/290 (27%), Gaps = 54/290 (18%) Query: 2 SVVTVATWNV-----NSIR-ARIHN----LAAWIKENNPDIICLQET-------KTEDKN 44 + V + +WN+ + + +R L ++ + DI+ QE K + Sbjct: 20 NSVNLTSWNIEWLSIDGGKVSRTPQDFEKLNHYVDKTQADILAFQEVESAAAVQKAVGND 79 Query: 45 F-----PFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDD--LDVQARFIEA 97 F + + Q + V + G+ + Sbjct: 80 FTIYLSDRSNASNRHLQFNDTNQYTGFAVRNGVSVLDKPDFSITRGNSKLRFASYLVLNP 139 Query: 98 TFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII 157 T L + G + + ++ R ++ + GD+N Sbjct: 140 DQDNETHLLSVHLKAGCSGAYRNNRDCKIVKQQGQALAKWIKARENNKQQYVVLGDFN-- 197 Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK 217 H+ W D + K H + Sbjct: 198 ---HNLGYRGDWLWDVLSDNTDAKLVTKNTKAECKVRSNRNPKKTHQF------------ 242 Query: 218 NKGIR--IDHIMLSPEATSLLHSARIDTKPRGWT----KPSDHTPVIVSL 261 R IDHI++S + + S+ + T + K SDH PV +L Sbjct: 243 ----RSVIDHIIVSGDLKA---SSGVQTVFKTQDVLDYKLSDHCPVSTTL 285 >gi|293376599|ref|ZP_06622827.1| endonuclease/exonuclease/phosphatase family protein [Turicibacter sanguinis PC909] gi|325839419|ref|ZP_08166858.1| endonuclease/exonuclease/phosphatase family protein [Turicibacter sp. HGF1] gi|292644825|gb|EFF62907.1| endonuclease/exonuclease/phosphatase family protein [Turicibacter sanguinis PC909] gi|325490539|gb|EGC92855.1| endonuclease/exonuclease/phosphatase family protein [Turicibacter sp. HGF1] Length = 262 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 42/280 (15%), Positives = 75/280 (26%), Gaps = 38/280 (13%) Query: 4 VTVATWNVNSIRAR--------IHNLAAWIKENNPDIICLQETKTEDKNF----PFETLQ 51 + + T N + A I LA IKE D+I LQE ++ Sbjct: 1 MKLLTLNCH---AWQEENQVEKIKYLAQVIKEKQYDVIALQEV----SQLINPNDENKVK 53 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 + NY + + ++ YQ I +H+ D + + + + Sbjct: 54 ADNYAVVLLSELMK---LGITDYQFIWDFSHIGFDVYEEGLAILTRYHIERAHSFVVTQA 110 Query: 112 YLPHGNPITS--------TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 + ++ + N + Sbjct: 111 NDVTNYRTRRIVAIDFISNNQPVSVYSCHLGWFHDTEEPFTGQVDELVSRLN---KERLN 167 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223 + NDA + E L + G D + KG+RI Sbjct: 168 IVVGDFNNDANLSGEGYD---YLLSKGLLDTYHLALKKDEGTTVAGKIDGWEENKKGLRI 224 Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 D ++ + S+ + SDH V V L+I Sbjct: 225 DLVLSDKPV--NVLSSHVIFNGSHKDIVSDHFGVEVELNI 262 >gi|294508891|ref|YP_003572950.1| endonuclease/exonuclease/phosphatase family [Salinibacter ruber M8] gi|294345220|emb|CBH25998.1| endonuclease/exonuclease/phosphatase family [Salinibacter ruber M8] Length = 317 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 40/288 (13%), Positives = 74/288 (25%), Gaps = 37/288 (12%) Query: 4 VTVATWNV------NS-IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56 +TV T+NV +RA I+ +PD++ LQE + L+Y+ Sbjct: 45 LTVMTYNVLYATPDTGTVRA--------IEAVDPDVVALQEI--SEPRL-RHIADELDYY 93 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 + N + G L + ++ L Sbjct: 94 FHHSDEHEANEEDTGLLSRYPISRPTRYGALLYLTVDDPIRIANVHLSPYPYEPYALRDD 153 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEP-----LIFAGDYNIIPQPHDCYNPIIWEN 171 ++ L + + Sbjct: 154 EMTPQEAVAQARKTRSPEIKPVLDALAKSVQEDVPTFLMGDFNEPSHLDWTPAAAEAGLH 213 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL---YSFWDYYADSWSKNKGIRIDHIML 228 + + GF DA R H Y++ D RID I + Sbjct: 214 LGLEVPWPT--SRAVTERGFRDAFRVAHPDEVKRPGYTWTTLTED--PDEVHDRIDFIYV 269 Query: 229 SPEATSLLHSARI-DTKPRGWTK-----PSDHTPVIVSLDI-PEPRKK 269 + + S+ + + + PSDH V+ ++ + P P Sbjct: 270 AGASVSVETAYTVGLRDASPTDRSVSGYPSDHRSVVTTVSLAPSPSDP 317 >gi|15600681|ref|NP_254175.1| hypothetical protein PA5488 [Pseudomonas aeruginosa PAO1] gi|107104590|ref|ZP_01368508.1| hypothetical protein PaerPA_01005669 [Pseudomonas aeruginosa PACS2] gi|116053638|ref|YP_793965.1| hypothetical protein PA14_72430 [Pseudomonas aeruginosa UCBPP-PA14] gi|218894591|ref|YP_002443461.1| putative hydrolase [Pseudomonas aeruginosa LESB58] gi|254237831|ref|ZP_04931154.1| hypothetical protein PACG_03928 [Pseudomonas aeruginosa C3719] gi|254243040|ref|ZP_04936362.1| hypothetical protein PA2G_03828 [Pseudomonas aeruginosa 2192] gi|296392353|ref|ZP_06881828.1| putative hydrolase [Pseudomonas aeruginosa PAb1] gi|313111571|ref|ZP_07797370.1| hypothetical protein PA39016_003370046 [Pseudomonas aeruginosa 39016] gi|9951822|gb|AAG08873.1|AE004961_8 hypothetical protein PA5488 [Pseudomonas aeruginosa PAO1] gi|115588859|gb|ABJ14874.1| putative hydrolase [Pseudomonas aeruginosa UCBPP-PA14] gi|126169762|gb|EAZ55273.1| hypothetical protein PACG_03928 [Pseudomonas aeruginosa C3719] gi|126196418|gb|EAZ60481.1| hypothetical protein PA2G_03828 [Pseudomonas aeruginosa 2192] gi|218774820|emb|CAW30638.1| putative hydrolase [Pseudomonas aeruginosa LESB58] gi|310883872|gb|EFQ42466.1| hypothetical protein PA39016_003370046 [Pseudomonas aeruginosa 39016] Length = 292 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 34/290 (11%), Positives = 72/290 (24%), Gaps = 67/290 (23%) Query: 4 VTVATWNVN-SI---------------------RA-RIHNLAAWIKENNPDIICLQETKT 40 + + ++N+ I RA + + + + D++ LQE Sbjct: 35 LRLLSFNIQVGISTERYRHYLTRGWQHLLPHAGRATNLKRIGELLA--DYDLVALQE--- 89 Query: 41 EDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT 100 + Q + Q Sbjct: 90 ----------------------ADGGSLRSGYVNQVEHLAQLGAFPYWYQQLNRNLGRIA 127 Query: 101 INTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP 160 ++ L + + + RF A + + L Sbjct: 128 QHSNGLLSRWRPTLLEDHPLPGP-PGRGAIFVRFGEGADALVVVMMHLALGARTRTRQLA 186 Query: 161 HDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG 220 + + + + L+N D +F + +N Sbjct: 187 YIRELIGDYRHQVLMGDMNTHAVDLLENSPLRDLGLMAPQVEA--TFPSWRP---QRN-- 239 Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQ 270 +DHI+LS + L + +P SDH PV V + +P+ + + Sbjct: 240 --LDHILLSSDLA--LERVDVLDQP-----ISDHLPVSVEIRLPDNLRDK 280 >gi|282859573|ref|ZP_06268677.1| endonuclease/exonuclease/phosphatase family protein [Prevotella bivia JCVIHMP010] gi|282587624|gb|EFB92825.1| endonuclease/exonuclease/phosphatase family protein [Prevotella bivia JCVIHMP010] Length = 296 Score = 47.9 bits (112), Expect = 0.001, Method: Composition-based stats. Identities = 36/289 (12%), Positives = 61/289 (21%), Gaps = 48/289 (16%) Query: 8 TWNV-----------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56 T+N+ N R L + +PDI +QE Q Y Sbjct: 14 TYNIRYDAESDRSEGNGWNVRSKVLCDMMNFEDPDIFGVQE--ALINQVHDLKSQLNGYD 71 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 G+ S + + + E + Sbjct: 72 YIGVGRDDGKEAGEFSAIFYKKDKLKKLANGNFWLSETPEKPGLGWDAACIRICTWGKFE 131 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 T K+ + A + + + + D + Sbjct: 132 EIGTKFKFYYFNLHMDHVGVVARREAAKLVIKRIKEIAGDKAPVILTGDFNVDQKDEIYK 191 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 + K + Y RIDHI +S E + Sbjct: 192 IFAESKILKDTYIAAKQRFAENG---------TYQGFKSDLYTESRIDHIFVSNEFE--V 240 Query: 237 HSARIDT------------------------KPRGWTKPSDHTPVIVSL 261 + I T + PSDH PV+ + Sbjct: 241 NHYGILTNGYWSKNASTNTTKEANAPQQISFEHYTHRLPSDHYPVLAKI 289 >gi|297293391|ref|XP_002804251.1| PREDICTED: nocturnin-like [Macaca mulatta] Length = 431 Score = 47.9 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 37/263 (14%), Positives = 65/263 (24%), Gaps = 28/263 (10%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFE--TLQSLNYHIETCGQKSYNGVAILSKYQPIE 78 + I PDI+CLQE D F L L Y + S +E Sbjct: 179 ILEEILAYQPDILCLQEV---DHYFDTFQPLLSRLGYQGTFFPKP-------WSPCLDVE 228 Query: 79 IVTHLPGD--DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 G + + I + + + + + + L+ Sbjct: 229 HNNGPDGCALFFLQNRFKLVNSANIRLTAMTLKTNQVAIAQTLECKESGRQFCIAVTHLK 288 Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN----MGFT 192 + N+ P+I D + Sbjct: 289 ARTGWERFRSAQGCDLLQNLQNITQGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAY 348 Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP------EATSLLHSARIDTKPR 246 + A + Y+ W ++ +D+I S A LL +I Sbjct: 349 KLLSADGQSEPPYTTWKIRTSGECRHT---LDYIWYSKHALNVRSALDLLTEEQIGPNRL 405 Query: 247 -GWTKPSDHTPVIVSLDIPEPRK 268 + PSDH ++ E Sbjct: 406 PSFNYPSDHLSLVCDFSFTEEPD 428 >gi|322696463|gb|EFY88255.1| exonuclease III [Metarhizium acridum CQMa 102] Length = 522 Score = 47.9 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 33/293 (11%), Positives = 78/293 (26%), Gaps = 40/293 (13%) Query: 2 SVVTVATWNVN-SIRARI----HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56 + V T N+ R I + +++ + D++ LQE+ D ++L ++ Sbjct: 239 RSIRVLTLNLWLGGRNVIDYHNKQV-SFLASQDVDVVALQESYFHDG---LRLAKALGWN 294 Query: 57 IETCGQKSYNGVAILSKYQPIEIVT-------------HLPGDDLDVQARFIEATFTINT 103 V+ILS+Y + L A + Sbjct: 295 A-----WQSKDVSILSRYPIGRVYREIEAGGTVRIDLDGSDRQLLVWNVHLNNAPYGPYD 349 Query: 104 QTL--RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161 N + +I + + + ++ + + Sbjct: 350 LCFTNYSTNYIQRREEWARRVQQVYEIVHRLKEYKVRKPEFQELPQILAGDFSSPSHLDY 409 Query: 162 DCYNPIIWEN---DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN 218 + + D R++ + + ++ + + Sbjct: 410 NKKTRDLHCKGREDPFPWPVSRRTVLDGKWTDSFREVYRNAWKVPGNTWSPIRKVNGDRP 469 Query: 219 KGI-RIDHIMLSPEATSLLHSARIDTKPR------GWTKPSDHTPVIVSLDIP 264 + + RID I + +L + P+ SDH V+ +P Sbjct: 470 EPMDRIDFIY-HKKLKTLHSDVVVVGDPKPEPYHADNEWTSDHAAVLSEFKLP 521 >gi|297674359|ref|XP_002815200.1| PREDICTED: nocturnin-like [Pongo abelii] Length = 431 Score = 47.9 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 37/263 (14%), Positives = 65/263 (24%), Gaps = 28/263 (10%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFE--TLQSLNYHIETCGQKSYNGVAILSKYQPIE 78 + I PDI+CLQE D F L L Y + S +E Sbjct: 179 ILEEILAYQPDILCLQEV---DHYFDTFQPLLSRLGYQGTFFPKP-------WSPCLDVE 228 Query: 79 IVTHLPGD--DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 G + + I + + + + + + L+ Sbjct: 229 HNNGPDGCALFFLQNRFKLVNSANIRLTAMTLKTNQVAIAQTLECKESGRQFCIAVTHLK 288 Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN----MGFT 192 + N+ P+I D + Sbjct: 289 ARTGWERFRSAQGCDLLQNLQNITQGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAY 348 Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP------EATSLLHSARIDTKPR 246 + A + Y+ W ++ +D+I S A LL +I Sbjct: 349 KLLSADGQSEPPYTTWKIRTSGECRHT---LDYIWYSKHALNVRSALDLLTEEQIGPNRL 405 Query: 247 -GWTKPSDHTPVIVSLDIPEPRK 268 + PSDH ++ E Sbjct: 406 PSFNYPSDHLSLVCDFSFTEEPD 428 >gi|325521811|gb|EGD00543.1| endonuclease/exonuclease/phosphatase [Burkholderia sp. TJI49] Length = 132 Score = 47.9 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 10/39 (25%), Positives = 17/39 (43%), Gaps = 4/39 (10%) Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 D + ++ + ID R SDH PV++ L+ Sbjct: 98 DFLFVTDTLLPRVARCEIDGDVR----ASDHQPVVLELN 132 >gi|260788626|ref|XP_002589350.1| hypothetical protein BRAFLDRAFT_217983 [Branchiostoma floridae] gi|229274527|gb|EEN45361.1| hypothetical protein BRAFLDRAFT_217983 [Branchiostoma floridae] Length = 372 Score = 47.9 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 33/267 (12%), Positives = 73/267 (27%), Gaps = 26/267 (9%) Query: 16 ARIHNLAAWIKENNPDIICLQETKTED--KNFPFETLQSLNYHIETCGQKSYNGVAILSK 73 AR + + D++ LQE ++D + ++ L YH + V Sbjct: 9 ARFQAIGEELCSGRYDLVSLQEVWSQDVYEKLVYQVQDVLPYHHYFYRHVKLSNVLHGWH 68 Query: 74 YQPIEIVTHLPGDDLDVQARFIEATFTINT------------QTLRIGNLYLPHGNPITS 121 + + + P + +R + T Sbjct: 69 GSGLCVFSRYPIIGSHQHRFTLNGFPHTPHHPDWYGGKMVGLCQVRHPGAEINIYVTHTH 128 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLI-FAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 T+Y+ + K + L + D NI+ + + + Sbjct: 129 TEYNHENDKDKAHRVLQAFELSQFIRHTGQSADVNILAGDLNNQPFELGLKIIESNTGMD 188 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM--LSPEATSLLHS 238 + ++ D+ + + Y+ + Y R D+++ S Sbjct: 189 DGWLTAEHKNAEDSGLTWNLDDNNYTCYPDYPPC-------RYDYVLYKGSARCRVRCVH 241 Query: 239 AR--IDTKPRGWTKPSDHTPVIVSLDI 263 + P SDH V+ L++ Sbjct: 242 CETTMHKVPGKPFNYSDHEGVVAHLEL 268 >gi|73669331|ref|YP_305346.1| hypothetical protein Mbar_A1825 [Methanosarcina barkeri str. Fusaro] gi|72396493|gb|AAZ70766.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro] Length = 235 Score = 47.9 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 38/262 (14%), Positives = 73/262 (27%), Gaps = 30/262 (11%) Query: 4 VTVATWNVN-SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + TWN N + R + ++ + +PD++ + E + DK Y+ Sbjct: 1 MKIITWNCNMAFRKKYKHILPF----DPDLLIVSECEHPDK------FSDKFYNDVLWIG 50 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 + N + + EI H + + + + + Sbjct: 51 DNRNKGLGVFSFNDFEIAIHESYCENYRYVLPVTVNGNEAMNLIAVWSQNNTEDPKRRYI 110 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K + L S + + ++ + Q Sbjct: 111 GEVWKSLNYYKDLFRFSTIIAGDFNWNVIW-------DQGNQKYPLYGTLTDVINLLEQF 163 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG--IRIDHIMLSPEATSLLHSAR 240 FT+A LY + KNK ID+I + + S Sbjct: 164 DIFSMYHTFTNAEFGIEKEPTLY---------FRKNKKTPYHIDYIFAPSKIINCGKSFL 214 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 + W SDH P+I L+ Sbjct: 215 VGKYE-DWISLSDHMPLIAELE 235 >gi|225387525|ref|ZP_03757289.1| hypothetical protein CLOSTASPAR_01278 [Clostridium asparagiforme DSM 15981] gi|225046361|gb|EEG56607.1| hypothetical protein CLOSTASPAR_01278 [Clostridium asparagiforme DSM 15981] Length = 317 Score = 47.9 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 45/308 (14%), Positives = 87/308 (28%), Gaps = 54/308 (17%) Query: 4 VTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQETK--TEDKNFPFETLQSLNYH 56 + + T N +S+ ++ A + PD++ LQE + E L +L + Sbjct: 1 MKLITLNTHSLVEPDYENKLKLFAEAVLRERPDVVALQEVNQSMGEPAVGQERLGALGF- 59 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 +E + + + V ++ I + L A + +IG G Sbjct: 60 VECRERGNESKVEAGARGAVIPVRADNHAYRLAGLLAEGGAPYFWTWVPAKIGYGRYDEG 119 Query: 117 NPI--------TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDY--NIIPQPHDCYNP 166 + T Y K + + + L+ + ++ Sbjct: 120 TALFSRLPVAQTGWIYLTGSRDYKNWKTRKALEMILDFHGKRCRFFSLHMGWWKDGDEPF 179 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYS---FWDYYADSWSKNKG--- 220 L+ F + L S + D Y + +K+ G Sbjct: 180 AGQWERLSGYLKNASGDLCFLMGDFNSPAGMQGEGWQLVSGSGWLDTYGLAAAKDNGVTV 239 Query: 221 ----------------------------IRIDHIMLSPEATSLLHSARIDTKPRGWTKPS 252 +RID+I ++ E +L S I G S Sbjct: 240 GGVIDGWRDSPQNADGPAPGAEGAHENGMRIDYIWVNREI-PVLRSQVICNGINGPVV-S 297 Query: 253 DHTPVIVS 260 DH V++ Sbjct: 298 DHYGVMIE 305 >gi|254584744|ref|XP_002497940.1| ZYRO0F16984p [Zygosaccharomyces rouxii] gi|186929042|emb|CAQ43367.1| Inositol phosphosphingolipids phospholipase C [Zygosaccharomyces rouxii] gi|238940833|emb|CAR29007.1| ZYRO0F16984p [Zygosaccharomyces rouxii] Length = 462 Score = 47.9 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 34/255 (13%), Positives = 71/255 (27%), Gaps = 19/255 (7%) Query: 28 NNPDIICLQETKTED--KNFPFETLQSLNYH-IETCGQKSYNGVAILSKYQPIEIVTHLP 84 D++ LQE ++ ++ YH I G + G+AILS+ + Sbjct: 78 EQYDVVALQEVWCQEDWDYIVMRCSENYPYHRIFYSGIITGPGLAILSRIPIESTFLYRF 137 Query: 85 GDDLDVQARFIEATFTINTQTLR----IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQ 140 + A + + + I N P + + + + Sbjct: 138 PLNGRPTAVHRGDWYVGKSVAITLLQQIDNNTPPLAIMNSHMHAPYALQGDAAYACHRAC 197 Query: 141 RLEL-----------EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNM 189 + +I GD N P + ++ Sbjct: 198 QAWDFAKLANLYKKAGYAVIVTGDLNSRPGSLHHRLLTDETDLVDSWEQLYGQQDPETLA 257 Query: 190 GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE-ATSLLHSARIDTKPRGW 248 + + + S + Y ++ R+D+ ++ P+ AR + G Sbjct: 258 KLKPSEQIIYGCTTCDSNLNTYRLDKRLDEACRLDYALVDPDRLLPTAAGARFTERIPGV 317 Query: 249 TKPSDHTPVIVSLDI 263 SDH +L + Sbjct: 318 GSFSDHFAYTCTLKL 332 >gi|281349110|gb|EFB24694.1| hypothetical protein PANDA_015351 [Ailuropoda melanoleuca] Length = 113 Score = 47.9 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 33/95 (34%), Gaps = 12/95 (12%) Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR 246 + D R H YSF+ ++S RIDH + S I Sbjct: 16 NELDLIDIYRTLHPRTKKYSFYSNAHGTFS-----RIDHALGHKTGLSQYQKIEIIPCI- 69 Query: 247 GWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 SDH + + L+ K ++S + ++ I Sbjct: 70 ----FSDHNALKLELN--HKEKPGRNSNTWRLRTI 98 >gi|330469350|ref|YP_004407093.1| endonuclease/exonuclease/phosphatase [Verrucosispora maris AB-18-032] gi|328812321|gb|AEB46493.1| endonuclease/exonuclease/phosphatase [Verrucosispora maris AB-18-032] Length = 236 Score = 47.9 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 36/262 (13%), Positives = 78/262 (29%), Gaps = 39/262 (14%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V ++NV+ R + LA +++ PD++ +Q E + + ++ Sbjct: 10 LRVVSYNVHGQRDDVAALATVVRQLAPDVLIVQ-----------EGPRRFGWRAKSATLA 58 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 + G+ + + LP + + Q + G Sbjct: 59 ASFGLVVAAG--------GLPALGNLLLVSLRVRVTGVRHQRFPLTPGRHMRGAAYADCV 110 Query: 124 YDDKISWIKR-FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + ++ +F + ++ P P + Sbjct: 111 VGGPARFTVAGSHLATDPVERPDQAKLFKRELDVAPLPVIAAAD-------LNEEPDGPA 163 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 + + + A+ A YS D RID + + P T + + Sbjct: 164 WCTVAHGLTDAAVAADRADRLTYSCADPR---------RRIDGVFVDPRIT--VVDYDVL 212 Query: 243 TKPRGWTKPSDHTPVIVSLDIP 264 P + SDH P++V L +P Sbjct: 213 DTPLSR-RASDHFPIVVDLLLP 233 >gi|221042678|dbj|BAH13016.1| unnamed protein product [Homo sapiens] Length = 212 Score = 47.9 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 5/63 (7%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73 R N+ IK + D++CLQE ++ ++ E L+SL YH E + Sbjct: 31 RFPNILKEIKHFDADVLCLQEV--QEDHYGAEIRPSLESLGYHCEYKMRTGRKPDGCAIC 88 Query: 74 YQP 76 ++ Sbjct: 89 FKH 91 >gi|209549109|ref|YP_002281026.1| endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209534865|gb|ACI54800.1| Endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 267 Score = 47.9 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%), Gaps = 2/52 (3%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLN 54 + + + N R L ++++ D++CLQE + ++ + + Sbjct: 1 MRIISLNAWGGRLH-EALIDYVRQAEADVLCLQEVLRAPGADWGWSIYRDAG 51 >gi|289167074|ref|YP_003445341.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus mitis B6] gi|288906639|emb|CBJ21473.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus mitis B6] Length = 208 Score = 47.9 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 50/134 (37%), Gaps = 11/134 (8%) Query: 1 MSVVTVATWNVN---SI-RARIHNLAAWIKENNPDIICLQETKTEDKNFPF-ETLQSLNY 55 M+ + + WNVN + + + +K + D++CL E K +F F E L+SL Y Sbjct: 1 MTQLKILNWNVNQRSGLGKQIPDVVVNELKHLDADVVCLTEYK---NHFEFCEQLKSLGY 57 Query: 56 HIETCG---QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 + ++ N V I K + + + D+ F+ L I Sbjct: 58 SLFMYPEYIERFQNEVLIAIKTKFVTLPKLTTFPKEDMFPDFLHLQIDFEGAPLHIIGAR 117 Query: 113 LPHGNPITSTKYDD 126 + S Y+ Sbjct: 118 IKIATIDNSLSYNR 131 >gi|325279089|ref|YP_004251631.1| Endonuclease/exonuclease/phosphatase [Odoribacter splanchnicus DSM 20712] gi|324310898|gb|ADY31451.1| Endonuclease/exonuclease/phosphatase [Odoribacter splanchnicus DSM 20712] Length = 286 Score = 47.9 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 38/275 (13%), Positives = 73/275 (26%), Gaps = 31/275 (11%) Query: 4 VTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 + +AT+N+ NS R ++ A+I +PDII +QE Sbjct: 25 LRLATFNIRYDNSGDGPNSWPHRKDSICAFIHRVDPDIIDMQEV--LHHQLEVLKTGLPE 82 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTH--LPGDDLDVQARFIEATFTINTQTLRIGNL- 111 Y + G++ + + + + RI Sbjct: 83 YTVVGVGREDGKTAGEYAPIFFKQAKYTLLDQNTFWLCEKPDSVGMVGWDAALTRIATWV 142 Query: 112 --YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 I R ++ + + I I+ + Sbjct: 143 KLQDKKTGQILMVVNTHFDHIGTEARRNSALLIIEKIKEIVGTSPAILTGDFNVSEDWDA 202 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 + + K+ + K +ID I ++ Sbjct: 203 YKTITNNEFILKDAHKVAGKRTGVDFTYHN------------FGKIPAEKCEKIDFIFVT 250 Query: 230 PEATSLLHSARI-DTKPRGWTKPSDHTPVIVSLDI 263 P+ + S+ I ++ SDH P IV L+I Sbjct: 251 PQI--RVISSYIPFSQLNDTLFLSDHNPEIVELEI 283 >gi|290956218|ref|YP_003487400.1| hypothetical protein SCAB_17031 [Streptomyces scabiei 87.22] gi|260645744|emb|CBG68835.1| conserved hypothetical protein [Streptomyces scabiei 87.22] Length = 305 Score = 47.9 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 43/272 (15%), Positives = 88/272 (32%), Gaps = 25/272 (9%) Query: 1 MSVVTVATWNV---NSIR-----ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52 +S + ++N+ N++R R A +++ P +I QE + ET Sbjct: 49 LSTM---SFNLRYANTVRPHSWAVRRPVTKALLRQEAPHVIGTQE-GLHQQLLDIETDLG 104 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 N+ G+ N ++ + + + + + Sbjct: 105 GNHRWIGTGRAGGNRDEFMAVFYDTRRLAPVEYRHFWLSDTPEVPGSNTWGGGSIRMVTW 164 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 + + + + ++ L ++ + + D P++ D Sbjct: 165 VRFRDLLDGGREFYVLNTHLDNLSQYARDRAAALIVRRIAGF-------DRSLPLVVTGD 217 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY-SFWDYYADSWSKNKGIRIDHIMLSPE 231 + + + G D A + LY +F Y + G RID I+ +P Sbjct: 218 FNVAAHRNPVYDTMLDAGLVDTWDAAAERTDLYATFHGYRPLTPG---GDRIDWILTTPG 274 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 T H A ++T PSDH PV +L + Sbjct: 275 VT--AHRAAVNTFASNGQYPSDHLPVQATLTL 304 >gi|281349224|gb|EFB24808.1| hypothetical protein PANDA_020565 [Ailuropoda melanoleuca] Length = 102 Score = 47.9 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 34/94 (36%), Gaps = 12/94 (12%) Query: 188 NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRG 247 + D R H YSF+ ++S RIDH++ + I Sbjct: 6 ELDLIDIYRTIHPRTKEYSFYSNAHGTFS-----RIDHVLGHKTGLNRYQKIEIIPCI-- 58 Query: 248 WTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 SDH + + L+ K ++S + ++ I Sbjct: 59 ---FSDHNALKLELN--HKEKFGRNSNTWRLRTI 87 >gi|294875575|ref|XP_002767386.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] gi|239868949|gb|EER00104.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] Length = 437 Score = 47.9 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 42/311 (13%), Positives = 88/311 (28%), Gaps = 57/311 (18%) Query: 2 SVVTVATWNVNSI---------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52 S + + +WNV+ + AR ++A+ I ++ P I+ LQE +F + Sbjct: 149 STLKILSWNVDGLDSHSDEIDMTARTMSVASHIIDHRPHIVLLQEL----IDFNTTWFRR 204 Query: 53 L---NYHIETCGQKSYN-------GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN 102 L Y + ++ + P+ ++ Sbjct: 205 LLSKFYDFYIQSSPPLPYFVGILIDRSAVAVHGPLVTDNFPNTKMGRALVSLDGEVRLLS 264 Query: 103 TQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD 162 +++ + + + S IF GD NI Sbjct: 265 GAPVKVHIATAHLESTKSFGRARVDQLKESFSDMRRSVGHSKSHLAIFGGDLNIRDDEVR 324 Query: 163 CYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI- 221 + + ++ ++ + ++ WD + N GI Sbjct: 325 QALLLPNGSKKVDIIDAWEASGR--------------PKDSEFT-WDMRIND---NLGIK 366 Query: 222 -----RIDHIMLSPEATSLL----------HSARIDTKPRGWTKPSDHTPVIVSLDIPEP 266 R D + L+ T + +D PSDH + + + I Sbjct: 367 GKPKARFDRLYLANSDTMKVSPQGFRLTGTTRCDMDEVKGKKRFPSDHFGIQLEMKIEMK 426 Query: 267 RKKQQDSTSQN 277 +K D ++ N Sbjct: 427 EEKVIDLSNDN 437 >gi|170734592|ref|YP_001773706.1| endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia MC0-3] gi|169820630|gb|ACA95211.1| Endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia MC0-3] Length = 258 Score = 47.9 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 12/50 (24%) Query: 4 VTVATWNVNS------IRARIHNLAAWIKENNPDIICLQE-----TKTED 42 + +AT+N++ RA + +AA I E + D+I LQE T+ D Sbjct: 24 LRIATYNIHGGYGAWPARA-VDRIAAVIDELDADVIALQEVPLGGTRAPD 72 >gi|147774768|emb|CAN66795.1| hypothetical protein VITISV_034153 [Vitis vinifera] Length = 664 Score = 47.9 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 2/41 (4%) Query: 4 VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTED 42 + + +WNV + + + IK N D++CLQETK ++ Sbjct: 3 IRILSWNVRGANDSDKRKTIKSVIKSNKVDVVCLQETKIKE 43 >gi|107022880|ref|YP_621207.1| endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia AU 1054] gi|116686877|ref|YP_840124.1| endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia HI2424] gi|105893069|gb|ABF76234.1| Endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia AU 1054] gi|116652592|gb|ABK13231.1| Endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia HI2424] Length = 263 Score = 47.9 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 12/50 (24%) Query: 4 VTVATWNVNS------IRARIHNLAAWIKENNPDIICLQE-----TKTED 42 + +AT+N++ RA + +AA I E + D+I LQE T+ D Sbjct: 29 LRIATYNIHGGYGAWSARA-VDRIAAVIDELDADVIALQEVPLGGTRAPD 77 >gi|116252933|ref|YP_768771.1| exo/endo phosphatase [Rhizobium leguminosarum bv. viciae 3841] gi|115257581|emb|CAK08678.1| putative exo/endo phosphatase [Rhizobium leguminosarum bv. viciae 3841] Length = 369 Score = 47.9 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 22/64 (34%) Query: 223 IDHIMLSPEATSL--------LHSA-----------RIDTKPR-GWTKP--SDHTPVIVS 260 +D++ LSP + + S ++ PR GW +P SDH PV+++ Sbjct: 306 LDYLWLSPALAAHNAGRLPEIIRSGQPYRTIFPPGQEVERYPRTGWDRPKASDHCPVVMT 365 Query: 261 LDIP 264 LD+P Sbjct: 366 LDLP 369 >gi|322693718|gb|EFY85569.1| exonuclease III [Metarhizium acridum CQMa 102] Length = 705 Score = 47.9 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 29/262 (11%), Positives = 59/262 (22%), Gaps = 31/262 (11%) Query: 22 AAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81 +I DI+ LQE ++L + Q G+ Sbjct: 394 VRFITNARADIVGLQE---STGGHAIRLAKALGWDY---WQGDDVGIISRYPMVEQYAPV 447 Query: 82 HLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQR 141 G R E F Y + ++ + +R + + Sbjct: 448 ERCGAVRIALDRGQEINFWNCHLGYTPYGPYDFCFDHLSPEEVHKNEIKSRRTPQIINIM 507 Query: 142 LELEEP---------LIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192 +++ + + F + + Sbjct: 508 KHMQDHLSQSSKTPVIFTGDFNAPSHLDWTNATKKLHCGQGYFPWPTSKHPVDAGLIDSF 567 Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGI-----RIDHIMLSPEATSLLHSARI------ 241 + + T ++ + + N+G RID I + A + Sbjct: 568 REVHSDPLTKPGITW----SPIYLDNEGRVEPKDRIDFIY-HKGLKTRSSEAVVVGQPTA 622 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 PSDH V + Sbjct: 623 QPDHYYNEWPSDHAAVKTVFKV 644 >gi|167523152|ref|XP_001745913.1| hypothetical protein [Monosiga brevicollis MX1] gi|163775714|gb|EDQ89337.1| predicted protein [Monosiga brevicollis MX1] Length = 585 Score = 47.9 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 35/310 (11%), Positives = 68/310 (21%), Gaps = 37/310 (11%) Query: 4 VTVATWNVNSIR----ARIHNLAAWIKENNPDIICLQET-KTEDKNFPFETL-QSLNYHI 57 +TVAT+N+ +R R + + D++ LQE K E + L Q L Y Sbjct: 101 LTVATYNLFGLRLAWETRWTGICKILGNVQADVLALQEVMKHEPTSTQAHLLAQELGYEY 160 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTH-----LPGDDLDVQARFIEATFTINTQTLRIGNLY 112 + + + + Sbjct: 161 VYYARAHEADPKEGGEEGLAIVSRFPAAVVQTVPLTPMPGSVDANARVFLHARFDTIPAL 220 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRL-----------------ELEEPLIFAGDYN 155 + + + + R L + N Sbjct: 221 AGESLHVLANHWTYDATAQCHAARELLAYLDALPAADHVVLLGDLNIYVNSEWPLDWLTN 280 Query: 156 IIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW 215 +P P + + + D ++ + Y + Sbjct: 281 RVPAPLREHTVNRCAEAMRQYQAGQSDSARRPAFRDVWHTSFAWDPGWTFTNFHYTNRTN 340 Query: 216 SKNKGIRIDHIML-SPEATSLLHSARIDTKPRGW-----TKPSDHTPVIVSLDIPEPRKK 269 + R D I+L S + SDH V + + P Sbjct: 341 LYERATRPDRILLRSEALVER--DVYLFGDALDGLVQPHLYASDHRGVATTFAV-RPGGA 397 Query: 270 QQDSTSQNMK 279 ++ T Sbjct: 398 KEWPTGWARL 407 >gi|15888787|ref|NP_354468.1| hypothetical protein Atu1461 [Agrobacterium tumefaciens str. C58] gi|15156541|gb|AAK87253.1| hypothetical protein Atu1461 [Agrobacterium tumefaciens str. C58] Length = 269 Score = 47.9 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 32/278 (11%), Positives = 80/278 (28%), Gaps = 32/278 (11%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + N + L +I ++PDI+CLQE + L ++ +E + Sbjct: 3 MRLICLNGWGGKLHDK-LVPYIASSDPDILCLQEV-VHTPAATQDWLSYRDHGVELPQRA 60 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT------------LRIGNL 111 ++ + + I DL + F + T G Sbjct: 61 NFFRDVAEALPDHVAIFCPAAQGDLWQGETRYPSQFGLATFVRKSIAIIAQAQGFVHGVF 120 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 ++ I + G ++I + H + + Sbjct: 121 SADGYGNHPRSRTAHAIRVFDFTTGQPVVIAHMHGLRDLEGKHDIPARLHQAKRLVQFVK 180 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTH-------HLYSFWDYYADSWSKNKGIRI- 223 + + + + ++ ++ D ++K R Sbjct: 181 NIAEDGDRVIVCGDFNVLPDSRTFAVLNELDLVELVTTRGFT--DTRTSHYAKPN--RYA 236 Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 D+++++P + + +P + SDH P+++ Sbjct: 237 DYLLVNPAV--KVSQFDVVRQP----EVSDHCPLLLEF 268 >gi|325293378|ref|YP_004279242.1| hypothetical protein AGROH133_07235 [Agrobacterium sp. H13-3] gi|325061231|gb|ADY64922.1| hypothetical protein AGROH133_07235 [Agrobacterium sp. H13-3] Length = 369 Score = 47.9 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 27/150 (18%), Positives = 46/150 (30%), Gaps = 24/150 (16%) Query: 136 RFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAI 195 + GD N + E R + F Sbjct: 221 NRWGANNTRNKNFAICGDMNDYQERISISGDRRSGYSFTPVEEERSALDIFTADDFVTNP 280 Query: 196 RATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT-------SLLHSA--------- 239 + D ++ Y++ + ++D+I LSP + A Sbjct: 281 MSRRDVMDRWTL--YHSRGPQEQHLCQLDYIWLSPHLAHINATRVPEIIRAGQPYRTVFP 338 Query: 240 ---RIDTKPR-GWTKP--SDHTPVIVSLDI 263 +D PR GW +P SDH PV+++LD+ Sbjct: 339 PGQEVDRYPRTGWDRPKASDHCPVVMTLDL 368 >gi|229002991|ref|ZP_04160856.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock3-17] gi|228758256|gb|EEM07438.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock3-17] Length = 354 Score = 47.9 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 39/270 (14%), Positives = 82/270 (30%), Gaps = 39/270 (14%) Query: 20 NLAAWIKENNPDIICLQE-------------TKTEDKNFPFETLQSLNYHIETCGQK--- 63 N+ +++++ + D I +QE K + + Y+ Sbjct: 97 NMLSFLQKEDSDFILVQEMDEKSLRSFDVNQYKAFQDGL-KDHASTFGYNFNAQWVPVPI 155 Query: 64 ------SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 + +G+ SKY+ E+ + + E I + + N Sbjct: 156 KKPHGYTNSGLGSFSKYKVEEVTRYQLPGREMWLRQLFELDRAIVEHKVPVDNGKYLRMV 215 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + + YD + K+ + F + + GDY ++ + + D F Sbjct: 216 NVHLSAYDKGGNIRKQQVEFLKEYMNRHYKN---GDYLVLGGDWNQLLSDVQLKDPKFKE 272 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW----SKNKGIRIDHIMLSPEAT 233 E + +L + D + W + +N ID ++SP Sbjct: 273 EWPEWLVQLPEDFTDGGFQWAVDD----TVWTVRDNVKSYVEDENFVTIIDGFLVSPN-- 326 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + + + SDH PV L + Sbjct: 327 --VEIVSVQGHDLKFEN-SDHNPVNAVLKL 353 >gi|229009363|ref|ZP_04166629.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock1-4] gi|228751907|gb|EEM01668.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock1-4] Length = 354 Score = 47.9 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 39/270 (14%), Positives = 82/270 (30%), Gaps = 39/270 (14%) Query: 20 NLAAWIKENNPDIICLQE-------------TKTEDKNFPFETLQSLNYHIETCGQK--- 63 N+ +++++ + D I +QE K + + Y+ Sbjct: 97 NMLSFLQKEDSDFILVQEMDEKSLRSFDVNQYKAFQDGL-KDHASTFGYNFNAQWVPVPI 155 Query: 64 ------SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 + +G+ SKY+ E+ + + E I + + N Sbjct: 156 KKPHGYTNSGLGSFSKYKVEEVTRYQLPGREMWLRQLFELDRAIVEHKVPVDNGKYLRMV 215 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + + YD + K+ + F + + GDY ++ + + D F Sbjct: 216 NVHLSAYDKGGNIRKQQVEFLKEYMNRHYKN---GDYLVLGGDWNQLLSDVQLKDPKFKE 272 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW----SKNKGIRIDHIMLSPEAT 233 E + +L + D + W + +N ID ++SP Sbjct: 273 EWPEWLVQLPEDFTDGGFQWAVDD----TVWTVRDNVKSYVEDENFVTIIDGFLVSPN-- 326 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + + + SDH PV L + Sbjct: 327 --VEIVSVQGHDLKFEN-SDHNPVNAVLKL 353 >gi|212540906|ref|XP_002150608.1| reverse transcriptase, putative [Penicillium marneffei ATCC 18224] gi|210067907|gb|EEA21999.1| reverse transcriptase, putative [Penicillium marneffei ATCC 18224] Length = 1071 Score = 47.9 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 19/58 (32%), Gaps = 4/58 (6%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 ID ++ S E + I G SDH + DI P + + P Sbjct: 26 IDLVLASTELAEEMVKCGIHYTNHG----SDHQAIETEFDISVPDRPTTERLLWKNAP 79 >gi|311747824|ref|ZP_07721609.1| putative endonuclease/exonuclease/phosphatase family protein [Algoriphagus sp. PR1] gi|126575815|gb|EAZ80125.1| putative endonuclease/exonuclease/phosphatase family protein [Algoriphagus sp. PR1] Length = 278 Score = 47.9 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 35/270 (12%), Positives = 78/270 (28%), Gaps = 41/270 (15%) Query: 2 SVVTVATWNV-------NSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52 + +TV T+N+ N R + + +AA I + +PD++ +QE Sbjct: 39 NTITVLTYNIYHGEDPAN--RGTSNLDEIAALILQYSPDVVAMQEV-------------- 82 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 + + K + A+ ++ + L + Sbjct: 83 --------DSMTTRTAGVYGKKVDLVQELAKLTGYSGYFAKAMDYAEGGYGEGLLVKGEA 134 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 + + + + + ++ + F ++ + Sbjct: 135 IFSTQNLPIPHGGEPRAAAWAEFKLSNDKKIAIAGTHFCHEFEENRIAQVKEISKVAGQS 194 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 + + + + I D + + S G RID++ P Sbjct: 195 NLPVIWAGDLNLRPDSEAYRSIIGTWKDAGSDPTPYSPTFGS--LKDGPRIDYVWFDPS- 251 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 L S ++ P SDH PV+V+L Sbjct: 252 KFTLESYQVLDVP-----FSDHYPVLVTLK 276 >gi|242797311|ref|XP_002482986.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500] gi|218719574|gb|EED18994.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500] Length = 1084 Score = 47.9 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 20/56 (35%), Gaps = 3/56 (5%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278 ID + S + + S DTKP W DH P+ D+ R N Sbjct: 803 IDLVWASHNLANRVVSC--DTKPEWWYGA-DHVPISTQFDLTAIRVPPLVRKQWNA 855 >gi|189461907|ref|ZP_03010692.1| hypothetical protein BACCOP_02573 [Bacteroides coprocola DSM 17136] gi|189431301|gb|EDV00286.1| hypothetical protein BACCOP_02573 [Bacteroides coprocola DSM 17136] Length = 289 Score = 47.9 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 37/266 (13%), Positives = 75/266 (28%), Gaps = 25/266 (9%) Query: 8 TWNV------NSIRA---RIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYHI 57 T+N+ +S+ R N+A +IK + DI+ +QE + ++ + + Sbjct: 35 TFNIRYDNPGDSLNNWQYRKDNVAQFIKSQDIDIVGMQEVLHNQLEDLKSRLPEYAEVGV 94 Query: 58 ETCGQKSYNGVA-ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 K+ + + K E++ + + Sbjct: 95 GREDGKTKGEYSPLFYKKDRFEVLDSNTFWLSQYPDSVGFIGWDGACSRIATWAKLKDKK 154 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + + R L +E+ GD + + T Sbjct: 155 TGKIFMAVNTHFDHVGTEARRKGALLIIEKIKEIVGDQPAVLTGDFNVTDQSEAYETITT 214 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 E + Y+F D + +ID I ++P+ + Sbjct: 215 NEFVLKDAYKEAAQREGV---------DYTFHD--FGRIPADSCDQIDFIFVTPQI--KV 261 Query: 237 HSARIDTK-PRGWTKPSDHTPVIVSL 261 S+ I + SDH P +V L Sbjct: 262 ESSYIPQEAEEAGQFLSDHNPEVVHL 287 >gi|289168236|ref|YP_003446505.1| hypothetical protein smi_1403 [Streptococcus mitis B6] gi|288907803|emb|CBJ22643.1| conserved hypothetical protein [Streptococcus mitis B6] Length = 271 Score = 47.9 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 33/273 (12%), Positives = 79/273 (28%), Gaps = 16/273 (5%) Query: 4 VTVATWNVNSI--RARIHNLAAWIK---ENNPDIICLQETK-------TEDKNFPFETLQ 51 + T N +S + ++ E + D+IC QE E +F Sbjct: 1 MKFLTLNTHSWMEKEAEEKFQFLLEDILEKDYDLICFQEINQEITSPEVEVNDFYQALPA 60 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 + H + + ++ K + G D + I + I + + + ++ Sbjct: 61 AEPIHQDHYVRLLVEKLSEQGKNYYWTWAYNHIGYDRYHEGVAILSKTPIEAREILVSDV 120 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG-DYNIIPQPHDCYNPIIWE 170 P + + K + ++ + + + + + + Sbjct: 121 DDPTDYHTRRVALAETVVDGKELAVASVHLSWWDKGFQEEWARFEAVLKELNKPLLLAGD 180 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230 + E Q+ +G DA + Y+ + +RID++ + Sbjct: 181 FNNPAGQEGYQAILASP-LGLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTTK 239 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 E + + + SDH + L Sbjct: 240 ELA--VEKLHVVFDGNKSPQVSDHYGLSAILSW 270 >gi|152985117|ref|YP_001351598.1| hypothetical protein PSPA7_6287 [Pseudomonas aeruginosa PA7] gi|150960275|gb|ABR82300.1| hypothetical protein PSPA7_6287 [Pseudomonas aeruginosa PA7] Length = 274 Score = 47.9 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 14/65 (21%) Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 +F + +N +DHI+LS + L + +P SDH PV V + +P+ Sbjct: 212 TFPSWRP---QRN----LDHILLSSDLA--LERVDVLDQP-----ISDHLPVSVEIRLPD 257 Query: 266 PRKKQ 270 + + Sbjct: 258 NLRDR 262 >gi|147832907|emb|CAN77370.1| hypothetical protein VITISV_033119 [Vitis vinifera] Length = 1190 Score = 47.9 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 22/40 (55%), Gaps = 2/40 (5%) Query: 4 VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTE 41 + + +WNV ++ + A I+ D++C+QETK + Sbjct: 3 IKLVSWNVRGANDSSKRKVIKAMIRSQRADLVCIQETKIQ 42 >gi|119613771|gb|EAW93365.1| angel homolog 2 (Drosophila), isoform CRA_a [Homo sapiens] Length = 465 Score = 47.9 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 5/63 (7%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73 R N+ IK + D++CLQE ++ ++ E L+SL YH E + Sbjct: 121 RFPNILKEIKHFDADVLCLQEV--QEDHYGAEIRPSLESLGYHCEYKMRTGRKPDGCAIC 178 Query: 74 YQP 76 ++ Sbjct: 179 FKH 181 >gi|325269449|ref|ZP_08136066.1| endonuclease/exonuclease/phosphatase [Prevotella multiformis DSM 16608] gi|324988370|gb|EGC20336.1| endonuclease/exonuclease/phosphatase [Prevotella multiformis DSM 16608] Length = 290 Score = 47.9 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 37/249 (14%), Positives = 71/249 (28%), Gaps = 18/249 (7%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQP 76 R L +I P + QE + L++ Y I + + Sbjct: 46 RCPQLCDFINFEQPAVFGTQEVLVTQLRDLLQGLEAYAY-IGVGRDDGREEGEYAAIFYR 104 Query: 77 IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 +++ L + + + + +RI Y + Sbjct: 105 KDLLKLLDSGNFWLSQTPERPSLGWDAACIRICTWGKFEDRATGKQFYFFNT-----HMD 159 Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIR 196 E + ++ + + D + S + + +A + Sbjct: 160 HVGTVARRESARLILQRIGLLAKAQPTILTGDFNVDQTDEIYGIFSRSGILRDCYANARQ 219 Query: 197 ATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK----PS 252 T ++ D+ DS S RIDH+ +S + + I T K S Sbjct: 220 RMAPTG---TWNDFMQDSRSN---ARIDHVFVSSDFD--IPHYAIFTNSYWTGKSRRNIS 271 Query: 253 DHTPVIVSL 261 DH PV+V L Sbjct: 272 DHYPVMVKL 280 >gi|296124108|ref|YP_003631886.1| endonuclease/exonuclease/phosphatase [Planctomyces limnophilus DSM 3776] gi|296016448|gb|ADG69687.1| Endonuclease/exonuclease/phosphatase [Planctomyces limnophilus DSM 3776] Length = 387 Score = 47.9 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 30/260 (11%), Positives = 64/260 (24%), Gaps = 22/260 (8%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +A+ NV + ++ ++E PD++ QE+++ + + + Sbjct: 146 LRIASCNVQDYQPAFGDVLRDLEELPPDVVAFQESRSINP-LCEDYFADWHKVQVEYFFV 204 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 + + + G + + + + + Sbjct: 205 ASKWPLEVLGHCDDSPFERSSG----LVVKVAHPEHPFALANIHLMTARPGLRELTPGSI 260 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 L + N +P + A + Sbjct: 261 LRGDGPAELAALTLMRSEEMQQLRHFIENARNGLP----LIVVGDFNTPASSHVFQEAWG 316 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + SFW +W RIDHI ++PE Sbjct: 317 DLTGGFETAAIGPSHTAPCRPISFWP---GTWP---WSRIDHIRVTPEWKF-------HQ 363 Query: 244 KPRGWTKPSDHTPVIVSLDI 263 G SDH V L++ Sbjct: 364 FVTGDRNGSDHRLVACELEL 383 >gi|296195555|ref|XP_002745450.1| PREDICTED: nocturnin [Callithrix jacchus] Length = 428 Score = 47.9 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 37/263 (14%), Positives = 65/263 (24%), Gaps = 28/263 (10%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFE--TLQSLNYHIETCGQKSYNGVAILSKYQPIE 78 + I PDI+CLQE D F L L Y + S +E Sbjct: 176 ILEEILAYQPDILCLQEV---DHYFDTFQPLLSRLGYQGTFFPKP-------WSPCLDVE 225 Query: 79 IVTHLPGD--DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 G + + I + + + + + + L+ Sbjct: 226 HNNGPDGCALFFLQNRFKLINSANIRLTAMTLKTNQVAIAQTLECKESGRQFCIAVTHLK 285 Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN----MGFT 192 + N+ P+I D + Sbjct: 286 ARTGWERFRSAQGCDLLQNLQNITQGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAY 345 Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP------EATSLLHSARIDTKPR 246 + A + Y+ W ++ +D+I S A LL +I Sbjct: 346 KLLSADGQSEPPYTTWKIRTSGECRHT---LDYIWYSKHALNVRSALDLLTEEQIGPNRL 402 Query: 247 -GWTKPSDHTPVIVSLDIPEPRK 268 + PSDH ++ E Sbjct: 403 PSFNYPSDHLSLVCDFSFTEESD 425 >gi|22208512|gb|AAM94327.1| putative reverse transcriptase [Sorghum bicolor] Length = 1998 Score = 47.9 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 35/257 (13%), Positives = 71/257 (27%), Gaps = 38/257 (14%) Query: 6 VATWNVNSIRARIHNLAAW------IKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 + WNV + ++ W I + DIICLQETK +F L+++ Sbjct: 810 ILHWNVRGLNSKEK----WNPIRNKIVDLAVDIICLQETK--KDSFDIAFLRNI------ 857 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 ++ L + L + I+ Q + N Sbjct: 858 -CPPDFDRFEYLPLVGASGGILTAWKSKLFSGELIFSNEYAISIQMSSMHNN-------- 908 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 S + + + D+ ++ + + + E+ Sbjct: 909 DSWLLTNVYAPCTDEGKRQFVNWFKNIQTPHEVDWLVVGDFNLMRKHEDRNKEGGDSSEM 968 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + ++G + I Y++ + ++ + ID S Sbjct: 969 FLFNSAISSLGLNEIIL----QGRKYTWSNMQSNPLLQK----IDWTFTSNSWNIKFLDT 1020 Query: 240 RIDTKPRGWTKPSDHTP 256 + PSDH P Sbjct: 1021 SVKGYDM---TPSDHAP 1034 >gi|226942361|ref|YP_002797434.1| endonuclease/exonuclease/phosphatase family protein [Azotobacter vinelandii DJ] gi|226717288|gb|ACO76459.1| endonuclease/exonuclease/phosphatase family protein [Azotobacter vinelandii DJ] Length = 286 Score = 47.9 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 14/60 (23%) Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 +F + IDHI+LSP T L ++ +P SDH PV V + +PE Sbjct: 229 TFPSWRPQ-------RCIDHILLSPSLT--LERVQVLPQP-----ISDHLPVAVEIRLPE 274 >gi|319654834|ref|ZP_08008910.1| hypothetical protein HMPREF1013_05532 [Bacillus sp. 2_A_57_CT2] gi|317393552|gb|EFV74314.1| hypothetical protein HMPREF1013_05532 [Bacillus sp. 2_A_57_CT2] Length = 237 Score = 47.9 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 31/259 (11%), Positives = 62/259 (23%), Gaps = 25/259 (9%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + WN R + +K DI+ + E E+ + + Sbjct: 1 MKLIVWNAA---MRFRDKLEHLKSYQADILIIPE---------SESPEKWG--------Q 40 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 + + ++ + L+ + I L N I Sbjct: 41 TKLKDVNQFLWFGEKVNKGIGIFTLNEHYKIELHPLYNKDFRYIIPLLVTGKRNFILFAV 100 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + + I + N T V Sbjct: 101 WSQNTKTKFESYIGQIYLALKYYDTLLKEPCVIAGDWNSNKNFNHIRRVGTHTDVVNLLK 160 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 K + H + + + + ID+I S + S L+ + Sbjct: 161 SKGITSTYHHFYNEEHGVESQPTHYFRKEYARPFH----IDYIFTSKDILSSLNKMEVGK 216 Query: 244 KPRGWTKPSDHTPVIVSLD 262 W K SDH P++ + Sbjct: 217 HE-NWIKLSDHMPLLTDFN 234 >gi|209550061|ref|YP_002281978.1| endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209535817|gb|ACI55752.1| Endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 369 Score = 47.9 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 22/64 (34%) Query: 223 IDHIMLSPEATSL--------LHSA-----------RIDTKPR-GWTKP--SDHTPVIVS 260 +D++ LSP+ + + S ++ PR GW +P SDH PV+++ Sbjct: 306 LDYLWLSPDLAAHNAGRLPEIIRSGQPYRTIFPPGQEVERYPRTGWDRPKASDHCPVVMT 365 Query: 261 LDIP 264 LD+P Sbjct: 366 LDLP 369 >gi|168020129|ref|XP_001762596.1| predicted protein [Physcomitrella patens subsp. patens] gi|162686329|gb|EDQ72719.1| predicted protein [Physcomitrella patens subsp. patens] Length = 463 Score = 47.9 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 36/264 (13%), Positives = 62/264 (23%), Gaps = 40/264 (15%) Query: 4 VTVATWNV-------NSIRARIHNLAAWIK--ENNPDIICLQE-----TKT-----EDKN 44 +T+A++N+ N R R + + PDII LQE TK + Sbjct: 120 LTIASYNIQCLGRGLNGRRKRRK-IRDLLHISHLQPDIILLQEERLTLTKCIARTVQMNL 178 Query: 45 FPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 L + + I S I +T+ + + Q Sbjct: 179 LTGAVLWKEGGYSAYDDSYAGGTAIIASYKFAIIAITNSICEHGVIVQ--------GRAQ 230 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 L N + Y + + A L + ++ + Sbjct: 231 YLTYLNSAFEKVGILNIYGYSYIGPGASLWQKIADFPLSETKWIMMG---HCNSIEDLSD 287 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA---THDTHHLYSFWDYYADSWSKNKGI 221 E L +G D H Y + + Sbjct: 288 KLGGNPTTGKGPRENESWTTLLIQLGLQDKFYMGVFRHMNQKRY----IRDNRRQHPHML 343 Query: 222 --RIDHIMLSPEATSLLHSARIDT 243 RID ++ E Sbjct: 344 ANRIDRAYVTSEIQERGEETWTHK 367 >gi|154272365|ref|XP_001537035.1| predicted protein [Ajellomyces capsulatus NAm1] gi|150409022|gb|EDN04478.1| predicted protein [Ajellomyces capsulatus NAm1] Length = 1331 Score = 47.9 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 28/75 (37%), Gaps = 8/75 (10%) Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 + W G ID LSP L I + K SDH P+ +L++ Sbjct: 408 TTWQDRGSP-----GTTIDLTFLSPLLHDKLRRCAIAEEA---CKGSDHKPMETTLELTP 459 Query: 266 PRKKQQDSTSQNMKP 280 K+ + +N +P Sbjct: 460 IPKEAERRNMKNAEP 474 >gi|269960777|ref|ZP_06175148.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269834441|gb|EEZ88529.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 442 Score = 47.9 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 39/284 (13%), Positives = 80/284 (28%), Gaps = 45/284 (15%) Query: 4 VTVATWNVNSIRA-------RIHNLAAWIKENNPDIICLQETKTE-DKNFPFETLQSLNY 55 + + T+N+ ++ A R + ++K D++ LQE F E + Y Sbjct: 178 LKLMTYNIWALPAIASHIGDRYELIPDYVK--GYDVLALQEVFASGRDAFLRELAKEYPY 235 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + + +N + + + I H Sbjct: 236 QTKMLDKDGFNIYDGGVIIVSRYPIVNQAQYVFPDCSGTDCFADKGVNYAEIIKGGQAYH 295 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + +D + R + ++ A NI Y+ N Sbjct: 296 VFATHTASFDTDTAREYRQ-------RQFKQMRTMAQSLNIPTNETVVYSGDFNVNK--- 345 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYS--FWDYYADSWS-------KNKGIRIDHI 226 + A + Y+ +D ++++ +N +D++ Sbjct: 346 ------LKFPGDYQQMIANLSAIEPQYSGYTASTFDPRINNFAGEALSGGENVEY-LDYV 398 Query: 227 MLSPEA-TSLLHSARIDTKPRGWTK-------PSDHTPVIVSLD 262 M+S E + R+D PR SDH PV + Sbjct: 399 MVSNEYGVKSFNDNRVD-VPRSTAGSLWKHYNLSDHFPVSAVIK 441 >gi|260173058|ref|ZP_05759470.1| hypothetical protein BacD2_14398 [Bacteroides sp. D2] gi|315921335|ref|ZP_07917575.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313695210|gb|EFS32045.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 575 Score = 47.9 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 31/251 (12%), Positives = 76/251 (30%), Gaps = 20/251 (7%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + +AT N+ + + + + D++C QE +Q+ ++ T Sbjct: 299 KTLKLATQNLWGKSTSV--VLDYFNRIDVDVLCAQEC----SGLSESDIQAQGLYVHTHS 352 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +I+S+Y I + G +D+ + + G L Sbjct: 353 NNGQGKCSIISRYPFSGITPNKYGAYIDLGEGIVVLVMNCHGAYFPYGPYQLNGIEYKDF 412 Query: 122 TKYDDKISWIKRFLRFASQRLEL--EEPLIFAGDYNIIPQPHDCYNPIIWENDA------ 173 DD +K ++ E+ + + + + + W A Sbjct: 413 PATDDVDYVVKVNKEARQGMVDKLLEDFNSSTTPFVCLSGDFNEPSWLDWTEGALSAGLA 472 Query: 174 ---CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230 R ++ I TH +++ + +K+ R+D + + Sbjct: 473 PYVVQWPTTRSLWEGGIKGDAYRTIHPDPVTHPGFTWTPRPSKKDTKD---RLDLTLYTL 529 Query: 231 EATSLLHSARI 241 + + S ++ Sbjct: 530 SPNTEVKSCQV 540 >gi|228998497|ref|ZP_04158085.1| Exonuclease III [Bacillus mycoides Rock3-17] gi|229005973|ref|ZP_04163663.1| Exonuclease III [Bacillus mycoides Rock1-4] gi|228755241|gb|EEM04596.1| Exonuclease III [Bacillus mycoides Rock1-4] gi|228761222|gb|EEM10180.1| Exonuclease III [Bacillus mycoides Rock3-17] Length = 49 Score = 47.9 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 7/29 (24%), Positives = 14/29 (48%), Gaps = 2/29 (6%) Query: 4 VTVATWNVNSIRA--RIHNLAAWIKENNP 30 + +WNVN +RA +++E + Sbjct: 1 MKFISWNVNGLRAVIAKGGFIEYLEEADA 29 >gi|304311554|ref|YP_003811152.1| hypothetical protein HDN1F_19240 [gamma proteobacterium HdN1] gi|301797287|emb|CBL45507.1| Hypothetical protein HDN1F_19240 [gamma proteobacterium HdN1] Length = 306 Score = 47.9 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 32/289 (11%), Positives = 68/289 (23%), Gaps = 69/289 (23%) Query: 2 SVVTVATWNVN------------------------SIRARIHNLAAWIKENNPDIICLQE 37 SV+ + ++N++ R R+ + + + + D + LQE Sbjct: 54 SVLRLLSYNIHAGLGTSSPHHYVTKSWRNLIPDTKGAR-RLDRIGSIL--SGYDFVALQE 110 Query: 38 TKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA 97 D + N V ++ + D ++ Sbjct: 111 V---DGG--------------SIRSSFINQVRYFAEQGQFDYWYQQLNRDFGRFGQYSNG 153 Query: 98 TFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII 157 I + LP + + L + Sbjct: 154 -ILSRYIPYEIQDHKLPGLKGRGAIVARYGDLSNPLVVVCLHLALGERARNRQLAYLRDL 212 Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK 217 +I D + E + + S+ + Sbjct: 213 ---IGIAEHVIVMGDLNCSGEQILATPLRETHLIQANGSHHTYP----SWKPQRS----- 260 Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEP 266 IDHI++SP + + SDH P+ + + +P Sbjct: 261 -----IDHILVSPSL--HIRRVEVLDVAL-----SDHRPIAMEIKLPAS 297 >gi|241760900|ref|ZP_04758989.1| Endonuclease/exonuclease/phosphatase [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|260753130|ref|YP_003226023.1| endonuclease/exonuclease/phosphatase [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|283856234|ref|YP_162080.2| endonuclease/exonuclease/phosphatase [Zymomonas mobilis subsp. mobilis ZM4] gi|241374519|gb|EER63980.1| Endonuclease/exonuclease/phosphatase [Zymomonas mobilis subsp. mobilis ATCC 10988] gi|258552493|gb|ACV75439.1| Endonuclease/exonuclease/phosphatase [Zymomonas mobilis subsp. mobilis NCIMB 11163] gi|283775229|gb|AAV88969.2| Endonuclease/exonuclease/phosphatase [Zymomonas mobilis subsp. mobilis ZM4] Length = 239 Score = 47.9 bits (112), Expect = 0.002, Method: Composition-based stats. Identities = 34/279 (12%), Positives = 72/279 (25%), Gaps = 66/279 (23%) Query: 3 VVTVATWNVNSIRAR-------IHNLAAWIKENNPDIICLQE--TKT--EDKNFPFETLQ 51 + VA++N++ +A + + + E + D + LQE + PF+ L Sbjct: 7 TIKVASYNIH--KAIGADKRRDPERILSVLDEIDADCVVLQEADHRLGKRRAILPFDALA 64 Query: 52 SLNYHIET----CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107 + Y ++G A+L + + I I + R Sbjct: 65 AHGYSYVPLSLRSCSLGWHGNALLLRDFASCVAYERVRLPRLEPRGAIICDIKIRGRVWR 124 Query: 108 IGNLYLPHGN--PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165 + +L + + + + G ++P Sbjct: 125 LIGSHLDLSGLFRRRQVAFIVDRLRNLQRDLPTVIMGDFNQWRRRDGCLRLLPDDFSV-- 182 Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225 + + A H +D Sbjct: 183 -----------------------LPTGASFPAQHPLVG-------------------LDR 200 Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 I+++P+ + P + SDH PV L + Sbjct: 201 IIIAPQI--RYLECGVHNTPLAR-QASDHLPVWAKLALS 236 >gi|242761128|ref|XP_002340120.1| transposon I factor, putative [Talaromyces stipitatus ATCC 10500] gi|218723316|gb|EED22733.1| transposon I factor, putative [Talaromyces stipitatus ATCC 10500] Length = 1384 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 21/65 (32%), Gaps = 4/65 (6%) Query: 209 DYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268 + + ID ++ S T + I G SDH + DIP P Sbjct: 618 TWQGGGQGGDYESTIDLVLASENLTDSMVKCAIH----GTEHGSDHRAIETVFDIPRPGP 673 Query: 269 KQQDS 273 Q+ Sbjct: 674 NHQER 678 >gi|187933196|ref|YP_001884567.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum B str. Eklund 17B] gi|187721349|gb|ACD22570.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum B str. Eklund 17B] Length = 262 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 36/277 (12%), Positives = 81/277 (29%), Gaps = 32/277 (11%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET------KTEDKNFPFETLQS 52 + + T N +S + +I LA I E N D I LQE K + N + Sbjct: 1 MKLLTLNCHSWQEENQIDKIKYLAKIISEKNYDAIALQEISQSIEAKVINNNLKVDNFAV 60 Query: 53 L------NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 L Y+ ++ + + + + T + Sbjct: 61 LLKAELDKYNTNYNFFWDFSHIGYGKYEEGLAVFTKHNIVNEKSFFISKGTDREYWKTRK 120 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 + + + I Y + W + +++ + + + Sbjct: 121 IVQVTFEYNNENID--LYSCHLGWWEDEEEPFKYQVKRLLEENTSNNITFFMGDFNNNAF 178 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226 + E + L N G D + + + + +R+D I Sbjct: 179 VRNEG-----------YDYLVNKGLVDTFNISKEADNGITVKGNIDGWDENKDKLRLDLI 227 Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + + + + ++++ SDH V +SL++ Sbjct: 228 LSNKKLD--VITSKVIFNGTNKDVISDHYGVEISLNL 262 >gi|320170231|gb|EFW47130.1| synaptojanin-PB [Capsaspora owczarzaki ATCC 30864] Length = 1161 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 45/305 (14%), Positives = 83/305 (27%), Gaps = 62/305 (20%) Query: 8 TWNVNSI-RARIHNLAAWI----KENNPDI--ICLQET--------------------KT 40 TWNVN RA L +W+ E PD+ + QE K Sbjct: 532 TWNVNGGKRAGEEALHSWLIVPPGEMPPDVYAVGFQEIVDLTAGNIMNADDSHRTAWEKA 591 Query: 41 EDKNFPFETL---QSLNYH-IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFI- 95 Q +Y + + + + + G + Sbjct: 592 IKDTINSSVFPNGQPASYALVVSQQLVGVCLCIFVRSDSISHVRDVVIGKHKTGFGGYAG 651 Query: 96 -----EATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIF 150 F + + ++ +L G + + D + R + + + + + Sbjct: 652 NKGAVAIRFRMYSTSICFVCAHLAAGQSNVTERNSDYADIMSRMSFGKGRVINNHDIVFW 711 Query: 151 AGDYNIIPQ-PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAI------RATHDTHH 203 GD+N P + + D E Q + +N + Sbjct: 712 IGDFNYRIDLPKEEVEGCVKNGDLATLYEADQLRIQRENGAVFAGFVEAPIIFVPTYKYD 771 Query: 204 LYS-FWDYYADSWSKNKGIRIDHIMLSPEATSLL----HSARIDTKPRGWTKPSDHTPVI 258 LYS +D + + P + + + T R K SDH PV Sbjct: 772 LYSDVFDTSEKARA-------------PAWCDRVLWRGENVDVLTYNRAELKSSDHRPVY 818 Query: 259 VSLDI 263 + D+ Sbjct: 819 ATFDL 823 >gi|89076503|ref|ZP_01162817.1| Exodeoxyribonuclease III [Photobacterium sp. SKA34] gi|89047821|gb|EAR53417.1| Exodeoxyribonuclease III [Photobacterium sp. SKA34] Length = 268 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 39/276 (14%), Positives = 80/276 (28%), Gaps = 25/276 (9%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQETK----------TEDKNFPFE 48 + + T N +S + ++ +A I E + D+I LQE + NFP Sbjct: 1 MKLLTLNTHSWQEQDQLEKLDIVAKAIIEQDCDVIALQEVNQRYDSSIINASTVSNFP-- 58 Query: 49 TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108 + S NY + G + + + + L +R + Sbjct: 59 -VHSDNYAYLLQQRLLVLGHQYYLTWDFVHQSYDVYQEGLAFLSREPVIEHQVIDLNDNY 117 Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168 + H + T + + Sbjct: 118 DENHWKHRRAVRITLGYKEQTLDIYNCHCGWWNDVESPFQQHIERIQSCLSDRLSLFLGD 177 Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK-GIRIDHIM 227 + + E + + + + D + + D W N +RID++ Sbjct: 178 FNTPSHLVDEGYSYLIQQGFIDTYTSAQMKDDGNTVVKCID----GWQNNHEALRIDYVF 233 Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + + + S ++ + SDH +IVSLD+ Sbjct: 234 SNQDV--SVSSHKVIFNGDYYPIVSDHFGLIVSLDL 267 >gi|322517552|ref|ZP_08070421.1| RgfB protein [Streptococcus vestibularis ATCC 49124] gi|322123812|gb|EFX95386.1| RgfB protein [Streptococcus vestibularis ATCC 49124] Length = 271 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 29/276 (10%), Positives = 70/276 (25%), Gaps = 26/276 (9%) Query: 4 VTVATWNVNSIRARIH----NLAAWIKEN----NPDIICLQETKTEDKNFPFETLQ-SLN 54 + T N +S + +KE DIIC QE ++ ++ Sbjct: 1 MKFLTLNTHS---WMEEDAEGKFQTLKEQILKAQYDIICFQEV---NQEIETAAVETDAY 54 Query: 55 YHIETCGQKSYNGVAIL---------SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT 105 YH + + + G D + + + + + Sbjct: 55 YHALPSATPIHQDHFVRLLVEKLAEEGLQYHWTWAYNHIGYDHLNEGVAVLSRQPLTSSE 114 Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165 + + ++ P + + + ++ Sbjct: 115 ILVSDVDDPTDYHTRRVAVAETTVDGREVAVASVHLSWWDKGFQEEWARIEGCFQSIGKP 174 Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225 I+ + + D+ + +T+ Y+ + +RID+ Sbjct: 175 LILAGDFNNPAGREGYQAILASPLKLQDSFQVAQETNGSYTVGPGIDGWKGNEEPLRIDY 234 Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + S E ++ + SDH + L Sbjct: 235 VFASQEWA--VNHLSVIFDGNNQPLVSDHYGLEAEL 268 >gi|149003378|ref|ZP_01828267.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pneumoniae SP14-BS69] gi|147758561|gb|EDK65559.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pneumoniae SP14-BS69] Length = 271 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 31/272 (11%), Positives = 74/272 (27%), Gaps = 14/272 (5%) Query: 4 VTVATWNVNSI--RARIHNL---AAWIKENNPDIICLQETK-------TEDKNFPFETLQ 51 + T N +S + I E + D+IC QE E + Sbjct: 1 MKFLTLNTHSWMEKEAEEKFQILLEDILEKDYDLICFQEINQEMTSSEVEVNDLYQALPA 60 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 + H + + ++ K + G + + I + I T+ + + ++ Sbjct: 61 AEPIHQDHYVRLLVEKLSEQGKNYYWTWAYNHIGYNRYHEGVAILSKTPIETREILVSDV 120 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 P + + K + ++ ++ + Sbjct: 121 DDPTDYHTRRVALAETVVDGKELAVASVHLSWWDKGFQEEWARFEAVLKKLNKPLLLAGD 180 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 + +G DA + Y+ + +RID++ + E Sbjct: 181 FNNPAGQEGYQAILASPLGLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTTKE 240 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + + + + SDH + L+ Sbjct: 241 LA--VENLHVVFDGNKSPQVSDHYGLNAILNW 270 >gi|86146808|ref|ZP_01065128.1| putative phospholipase C precursor [Vibrio sp. MED222] gi|85835458|gb|EAQ53596.1| putative phospholipase C precursor [Vibrio sp. MED222] Length = 444 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 43/285 (15%), Positives = 86/285 (30%), Gaps = 43/285 (15%) Query: 2 SVVTVATWNVNSIRA-------RIHNLAAWIKENNPDIICLQETKTE-DKNFPFETLQSL 53 + + V T+N+ ++ A R + ++K D++ LQE F E + Sbjct: 179 NTLKVMTYNIWALPAIASHIGDRYDLIPQYVK--GYDVLALQEVFANGRDEFLRELSKEY 236 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 Y + + N + + I N Sbjct: 237 PYQTKMLDKDGINIYDGGVIIVSRYPIVNEAQYVFPDCTGTDCFADKGVNYAEIIKNGQA 296 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 H + +D + R + ++ A I Y+ N Sbjct: 297 YHVFGTHTASFDTDTARDYRQ-------RQFKQMRQLAQSLEIPTSETVIYSGDFNVNKL 349 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYS--FWDYYADSWS-------KNKGIRID 224 F + +Q F LQ T+ Y+ +D ++++ +N +D Sbjct: 350 KFPDDYQQMFANLQADE---------PTYSGYTASTFDPRINNFAGEPMSGGENVEY-LD 399 Query: 225 HIMLSPEATSLLHSA-RID------TKPRGWTKPSDHTPVIVSLD 262 ++++S E H+ R+D ++ SDH PV + Sbjct: 400 YVVVSSEYAQKTHNNNRVDVPRSTSSELWKHYNLSDHFPVSAVIK 444 >gi|325923708|ref|ZP_08185327.1| metal-dependent hydrolase [Xanthomonas gardneri ATCC 19865] gi|325545794|gb|EGD17029.1| metal-dependent hydrolase [Xanthomonas gardneri ATCC 19865] Length = 251 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 33/250 (13%), Positives = 66/250 (26%), Gaps = 19/250 (7%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQP 76 R + A I++ +PD+ QE ++ + Y G+++ + + Sbjct: 20 RRTAMVALIEQAHPDVFGTQE--LVEEQAQYLAAHLPAYRWFGKGRRADGSDEHMGVFYD 77 Query: 77 IEIVTHLPGDDLDVQARFIEATFTINTQTL-RIGNLYLPHGNPITSTKYDDKISWIKRFL 135 ++T + D + + L R+ L Y + R Sbjct: 78 SRVLTVVESGDFWLSETPEIPGSSSWNTDLPRMATWALFERRSDKRRFYLFNTHFAHRDQ 137 Query: 136 RFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAI 195 A++ + +P + +D + Sbjct: 138 DEAAREHSA---RVILSRIATLPADIPVVVTGDFNSDPDNGTYRTLTAVLGDARAHATKR 194 Query: 196 RATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHT 255 + T ++ RID I+ T G PSDH Sbjct: 195 QGPEKTFQDFTTHPTR----------RIDWILF-RGLTP--TRFSTLETRPGGILPSDHY 241 Query: 256 PVIVSLDIPE 265 PV+ P+ Sbjct: 242 PVLAEFAWPQ 251 >gi|281353542|gb|EFB29126.1| hypothetical protein PANDA_003778 [Ailuropoda melanoleuca] Length = 131 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 24/125 (19%), Positives = 38/125 (30%), Gaps = 12/125 (9%) Query: 157 IPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS 216 P P + E R L + R H YSF+ ++S Sbjct: 4 TPLSEIDRTPWQKLSKEKINKETRALNAILDQVDLIHIYRTPHPRTKEYSFYSNAHGTFS 63 Query: 217 KNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQ 276 RIDH + S I SDH + + L+ K ++S + Sbjct: 64 -----RIDHALGHKTGLSQYQKIEIIPCI-----FSDHNALKLELN--HKEKPGRNSNTW 111 Query: 277 NMKPI 281 ++ I Sbjct: 112 RLRTI 116 >gi|206560253|ref|YP_002231017.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia cenocepacia J2315] gi|198036294|emb|CAR52190.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia cenocepacia J2315] Length = 284 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 17/38 (44%), Gaps = 4/38 (10%) Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 D + ++ + ID G + SDH PV++ L Sbjct: 250 DFVFVTDTLLPRVTRCEID----GNVRASDHQPVLLDL 283 >gi|156083036|ref|XP_001609002.1| endonuclease/exonuclease/phosphatase family domain containing protein [Babesia bovis T2Bo] gi|154796252|gb|EDO05434.1| endonuclease/exonuclease/phosphatase family domain containing protein [Babesia bovis] Length = 630 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 22/94 (23%), Positives = 41/94 (43%), Gaps = 8/94 (8%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTED-KNFPFETLQSLNYHIETCGQKS 64 V +WN +R + ++++ D++CLQE E+ KNF +L Y +K+ Sbjct: 229 VMSWN-----SRKFAILDVLQQSEADVVCLQEVDEEEYKNFFLTEFLALGYGSYFKKKKT 283 Query: 65 Y--NGVAILSKYQPIEIVTHLPGDDLDVQARFIE 96 +GV +L E++ H + A + Sbjct: 284 PKLDGVCVLYNEDRFELLYHKDVEFAVHDADYDR 317 >gi|18407510|ref|NP_566121.1| endonuclease/exonuclease/phosphatase family protein [Arabidopsis thaliana] gi|4249410|gb|AAD13707.1| expressed protein [Arabidopsis thaliana] gi|21618284|gb|AAM67334.1| unknown [Arabidopsis thaliana] gi|109134181|gb|ABG25088.1| At2g48030 [Arabidopsis thaliana] gi|330255832|gb|AEC10926.1| endonuclease/exonuclease/phosphatase domain-containing protein [Arabidopsis thaliana] Length = 438 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 36/281 (12%), Positives = 74/281 (26%), Gaps = 35/281 (12%) Query: 13 SIRARIHNLAAWIKENNPDIICLQETKTEDKN---FPFETLQSLNY-HIETCGQKSYNGV 68 +R+ L + E + D++ LQ+ K ++ + + +L ++ G Sbjct: 150 GLRSTRTAL-EVLSELDADVLALQDVKADEADQMRPLSDLAAALGMNYVFAESWAPEYGN 208 Query: 69 AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY---- 124 AILSK+ D D + + + + +L H + K Sbjct: 209 AILSKWPIKSSNVLRIFDHTDFRNVLKASIEVPGSGEVEFHCTHLDHLDEKWRMKQVDAI 268 Query: 125 ----DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + E Y + +P + + +T Sbjct: 269 IQSTNVPHILAGALNSLDESDYSPERWTDIVKYYEEMGKPIPKAQVMRFLKSKEYTDAKD 328 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + + + G R+D+I+ S ++ Sbjct: 329 FAGECESVVVVAKGQSVQGTCK----------------YGTRVDYILASSDSPYRFVPGS 372 Query: 241 IDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 SDH V V + + Q +PI Sbjct: 373 --YSVLSSKGTSDHHIVKVD----VVKATSINVNEQEQRPI 407 >gi|86742342|ref|YP_482742.1| endonuclease/exonuclease/phosphatase [Frankia sp. CcI3] gi|86569204|gb|ABD13013.1| Endonuclease/exonuclease/phosphatase [Frankia sp. CcI3] Length = 356 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 7/41 (17%) Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +RIDH++ SP + + G SDH PVI L Sbjct: 320 LRIDHVLASPAFA--VTGFEV-----GGDFGSDHRPVIADL 353 >gi|242811890|ref|XP_002485845.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500] gi|218714184|gb|EED13607.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500] Length = 654 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 20/56 (35%), Gaps = 3/56 (5%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278 ID + S + + S DTKP W DH P+ D+ R N Sbjct: 181 IDLVWASHNLANRVVSC--DTKPEWWYGA-DHVPISTQFDLTAIRVPPLVRKQWNA 233 >gi|5924316|gb|AAD56548.1| carbon catabolite repression 4 protein homolog [Homo sapiens] Length = 431 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 40/263 (15%), Positives = 68/263 (25%), Gaps = 28/263 (10%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFE--TLQSLNYHIETCGQKSYNGVAILSKYQPIE 78 + I PDI+CLQE D F L L Y + S +E Sbjct: 179 ILEEILAYQPDILCLQEV---DHYFDTFQPLLSRLGYQGTFFPKP-------WSPCLDVE 228 Query: 79 IVTHLPGD--DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 G + + I + + + + + + L+ Sbjct: 229 HNNGPDGCALFFLQNRFKLVNSANIRLTAMTLKTNQVAIAQTLECKESGRQFCIAVTHLK 288 Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVRQSFQKLQNMGFTDAI 195 + N+ P+I D E N+ A Sbjct: 289 ARTGWERFRSAQGCDLLQNLQNITQGAKIPLIVCGDFNAEPTEEVYKHFASSNLNLNSAY 348 Query: 196 R---ATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP------EATSLLHSARIDTKPR 246 + A + Y+ W ++ +D+I S A LL +I Sbjct: 349 KLLSADGQSEPPYTTWKIRTSGECRHT---LDYIWYSKHALNVRSALDLLTEEQIGPNRL 405 Query: 247 -GWTKPSDHTPVIVSLDIPEPRK 268 + PSDH ++ E Sbjct: 406 PSFNYPSDHLSLVCDFSFTEESD 428 >gi|83747941|ref|ZP_00944972.1| dioxygenase [Ralstonia solanacearum UW551] gi|207743451|ref|YP_002259843.1| metal-dependent hydrolase protein [Ralstonia solanacearum IPO1609] gi|83725359|gb|EAP72506.1| dioxygenase [Ralstonia solanacearum UW551] gi|206594848|emb|CAQ61775.1| metal-dependent hydrolase protein [Ralstonia solanacearum IPO1609] Length = 289 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 35/300 (11%), Positives = 75/300 (25%), Gaps = 52/300 (17%) Query: 1 MSVVTVATWNV------NSIRARIHNLAAWIKENNP-DIICLQETKTEDKNFP------- 46 M + + TWN+ + R + + A P DI+CLQE + + P Sbjct: 1 MGTI-ILTWNIQWGRGADG-RVDLPRMLAEAHAMGPFDILCLQEITSGFGHLPGQPGDDQ 58 Query: 47 -FETLQSLNYHI----------ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFI 95 E +L + G AI+++ + + H D Sbjct: 59 WRELAGTLGPAFTLIDGIALERHEGTRIQRFGNAIVTRLPVLHVARHALPCPADTSPTMP 118 Query: 96 EATF-----------TINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL 144 + + L + + Sbjct: 119 RMAIEATVQAPFGPLRVISTHLEYYSETQRIAQIDALRALHVEGWMRAAHPPTLGPEPAD 178 Query: 145 EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL 204 A + + P ++ T + Sbjct: 179 GPFRPLAQTHATVICGDFNCKPDSTPKRLATVPFSHETATLYDAWEVAHGTAPQPPTFGV 238 Query: 205 Y--SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + + W A + D +++S + + ++ T+ SDH P+++ L+ Sbjct: 239 HDRTGWTEPAYA--------CDFMLVSEPLKTRVARVEVN----SVTQASDHQPMLLELN 286 >gi|326801928|ref|YP_004319747.1| endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21] gi|326552692|gb|ADZ81077.1| Endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21] Length = 310 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 46/300 (15%), Positives = 82/300 (27%), Gaps = 59/300 (19%) Query: 6 VATWNV------------NSIRARIHNLAAWIKENNPDIICLQE-TKTEDKNFPFETLQS 52 VAT+N+ + + R +A I+ + DI QE + ++ +L + Sbjct: 29 VATYNIRNDNNKEDAARGDGWKQRYPIIADLIRFHEFDIFGTQEGLYHQLEDL-KSSLPN 87 Query: 53 LNYH-IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 NY + K + + + L Q + + + Sbjct: 88 YNYTGVGRDDGKQAGEYSAIFYNTEKFDLLDHGDFWLSTQTDYPNKGWDAVLPRICSWAK 147 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 N T ++ + R S +L L + AG++ I + Sbjct: 148 LQVKANGKTLYFFNVHFDHVGTTARKESAKLILSKVKELAGNHTAILTGDFNVDQHSNSY 207 Query: 172 DA--CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 + + S RIDHI L+ Sbjct: 208 QVLEQSHILQDAFEAAPFRYVTNGTFNNFNPNSKTDS---------------RIDHIFLT 252 Query: 230 PEATSLLHSARID---------------------TKPRGWTK----PSDHTPVIVSLDIP 264 + +H I + R PSDH PV++SLD+P Sbjct: 253 TDF--KVHKYGILTDTYRSTLQNPQEAYQSGNFPKEVRLTDHRARVPSDHFPVMISLDMP 310 >gi|310790575|gb|EFQ26108.1| endonuclease/Exonuclease/phosphatase [Glomerella graminicola M1.001] Length = 300 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 29/240 (12%), Positives = 58/240 (24%), Gaps = 15/240 (6%) Query: 32 IICLQET-KTEDKNFPFETLQSLNYHIETCGQKSYNGVAI-LSKYQPIEIVTHLPGDDLD 89 ICLQE ++ ++ + Y G + L Sbjct: 61 FICLQEVLYSQIEDVQSYLGSAWGYIGLGRDDGKRGGEFSPVFYQVDRWKCERSETLWLS 120 Query: 90 VQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLI 149 + + +L R S +L L Sbjct: 121 KTPEKPSRGWDAALNRVVTVGEFLDKATDTRVVVMSTHFDHQGVVAREESAKLLLRIARE 180 Query: 150 FAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY---- 205 + N P ++ D T E + + Y Sbjct: 181 WGKGANGKPP-----TAVLLAGDFNSTPEDNAYKTMVAPESGMVDVSTQVPEEKRYGNKL 235 Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT-KPSDHTPVIVSLDIP 264 ++ + +RID + + + + + + + SDH PV+ ++IP Sbjct: 236 TYTSFNEPDEEP---LRIDFLFVKDPSPVTIKTFGVLSNKFDDDVYLSDHRPVVADIEIP 292 >gi|254788112|ref|YP_003075541.1| endonuclease/exonuclease/phosphatase family protein [Teredinibacter turnerae T7901] gi|237685110|gb|ACR12374.1| endonuclease/exonuclease/phosphatase family protein [Teredinibacter turnerae T7901] Length = 250 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 45/272 (16%), Positives = 80/272 (29%), Gaps = 33/272 (12%) Query: 2 SVVTVATWNVN-SIRA-----RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55 V + T N++ A +H L ++E +PD++ LQE E + F + + Sbjct: 4 RKVKILTVNMHKGFNAFNRRFTLHELREALREIDPDVVFLQEVLGEHRQF---ATRYTDL 60 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 E + + V + +RF + + +L Sbjct: 61 WPEQSQYEFLADQVWSAHAYGRNAVYPHGHHGNALLSRFPIDRWHNHDISLSGIEKR--- 117 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 G ++ + + + N +P F Sbjct: 118 GLLYCHLNLGEQKLHAICVHLSLRESHRQIQLKRLSKLVNSLPADEPVVVA------GDF 171 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 ++ L N H SF +R+D I L Sbjct: 172 NDWRLKAENLLFNESRLVDAYTGHQGKPARSFPVAMPL-------LRLDRIYL------R 218 Query: 236 LHS-ARIDTKPRG-WTKPSDHTPVIVSLDIPE 265 +S I+ R W++ SDH P++V LDI E Sbjct: 219 CNSRYEIERLHRSPWSRISDHKPLMVELDIQE 250 >gi|228995361|ref|ZP_04155046.1| Endonuclease/exonuclease/phosphatase [Bacillus pseudomycoides DSM 12442] gi|228764403|gb|EEM13266.1| Endonuclease/exonuclease/phosphatase [Bacillus pseudomycoides DSM 12442] Length = 354 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 40/270 (14%), Positives = 83/270 (30%), Gaps = 39/270 (14%) Query: 20 NLAAWIKENNPDIICLQE-------------TKTEDKNFPFETLQSLNYHIETCGQK--- 63 N+ +++++ + D I +QE K + + Y+ Sbjct: 97 NMLSFLQKEDSDFILVQEMDEKSLRSFDVNQYKAFQDGL-KDHASTFGYNFNAQWVPVPI 155 Query: 64 ------SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 + +G+ SKY+ E+ + + E I Q + + N Sbjct: 156 KKPHGYTNSGLGSFSKYKVEEVTRYQLPGREMWLRQLFELDRAIVEQKVPVDNGKYLRMV 215 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + + YD + K+ + F + + GDY ++ + + D F Sbjct: 216 NVHLSAYDKGGNIRKQQVEFLKEYMNKHYKN---GDYLVLGGDWNQLLSDVQLKDPKFKE 272 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW----SKNKGIRIDHIMLSPEAT 233 E + +L + D + W + +N ID ++SP Sbjct: 273 EWPEWLVQLPEDFTDGGFQWAVDD----TVWTVRDNVKSYVEDENFVTIIDGFLVSPN-- 326 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + + + SDH PV L + Sbjct: 327 --VEIVSVQGHDLKFEN-SDHNPVNAVLKL 353 >gi|186474192|ref|YP_001861534.1| endonuclease/exonuclease/phosphatase [Burkholderia phymatum STM815] gi|184196524|gb|ACC74488.1| Endonuclease/exonuclease/phosphatase [Burkholderia phymatum STM815] Length = 250 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 5/40 (12%) Query: 4 VTVATWNVNSI----R-ARIHNLAAWIKENNPDIICLQET 38 + +ATWN++ R A + I+E + DI+ LQE Sbjct: 21 LRIATWNIHGTVGTDRFASPERIGRVIRELDADIVALQEV 60 >gi|330812030|ref|YP_004356492.1| putative endonuclease [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327380138|gb|AEA71488.1| putative endonuclease [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 269 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 33/256 (12%), Positives = 67/256 (26%), Gaps = 37/256 (14%) Query: 15 RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKY 74 R + L ++ + D++ LQE ++ P S + Sbjct: 44 RFILPELREAVRSVSADVVFLQEVHGTHEHHP--------QRYSNWPSMPQYEFLADSLW 95 Query: 75 QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST---KYDDKISWI 131 + D + I L + + + S D Sbjct: 96 PQFAYGRNAVYPAGDHGNALLSKFQIIRHDNLDVSISGHENRGMLHSVLRLPGDGPQVHA 155 Query: 132 KRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY---NPIIWENDACFTLEVRQSFQKLQN 188 + +E+ + + +P + W A LE + Sbjct: 156 ICVHLGLREGHRVEQLKLLCQRLSELPPDAPVIVAGDFNDWRGKASELLEPCGLREVFAE 215 Query: 189 MGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHSARIDTKPRG 247 W A S+ + +R+D I + H ++ R Sbjct: 216 Q------------------WGKPARSFPARLPILRLDRIYV-RNL--KAHHPKVL-NVRP 253 Query: 248 WTKPSDHTPVIVSLDI 263 W+ SDH P+ V +++ Sbjct: 254 WSHLSDHAPLSVEIEL 269 >gi|118764500|emb|CAJ13350.2| pol protein [Drosophila simulans] Length = 902 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 40/277 (14%), Positives = 76/277 (27%), Gaps = 31/277 (11%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + + WN I +I+ L A+IK+ + I+ + ET+ E L +H Sbjct: 12 NTLKIGYWNSCGITNKINELEAYIKKEDIQIMLVTETRLERN---SNALNFKGFHTYLAQ 68 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 + + + I + + I Sbjct: 69 NPTSHRKGGTATIVNQNIRHTCLNPIETDFMQSAPIALIPSNH---IRANMTIVAPIYCP 125 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + + L+ + I GD+N + + + Sbjct: 126 PVFKWTTEQFSKLFNHFDTLLDGKTKFILGGDWNCKH---RLWGNFLSCAKGRSLSQSIL 182 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 + + L + A D S +D + T L + Sbjct: 183 ARKDLDIVATGQATHFPFDKKKQPSA---------------LDFAICKGFHTKRLKTYST 227 Query: 242 DTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278 D SDH P+ + LD PE Q ++T+ N Sbjct: 228 D------ELSSDHLPIQIVLD-PEDTDWQLNNTTNNA 257 >gi|26353944|dbj|BAC40602.1| unnamed protein product [Mus musculus] Length = 212 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 31/97 (31%), Gaps = 5/97 (5%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73 R N+ IK + D++CLQE ++ ++ E L+SL YH E + Sbjct: 31 RFPNILKEIKHFDADVLCLQEV--QEDHYGTEIRPSLESLGYHCEYKMKTGRKPDGCAIC 88 Query: 74 YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 ++ + L + Sbjct: 89 FKHSRFSLLSVNPVEFCRRDIPLLDRDNIGLVLLLQP 125 >gi|291514150|emb|CBK63360.1| Metal-dependent hydrolase [Alistipes shahii WAL 8301] Length = 539 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 29/265 (10%) Query: 7 ATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57 ++N+ N + R + I P I+ LQE + + Q Y Sbjct: 283 ISFNIRVDNPSDGDNIWKNRKQAVITMINRQQPTIMGLQE--AQPHQITYLAKQCPEYAW 340 Query: 58 E----TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 G+ S+ + LD ++ T I ++ Sbjct: 341 YGLGRDTGEAPPKTETYASEECMAIFFQTSIVEMLDKGTFWLSETPNIPSKGWDANYNRS 400 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + + L + E + + N Sbjct: 401 CTWALFRQKTTGKRFYFFNTHLDNSGAVARKESIKLIINKIEEVNSEQLPVFLTADFNSD 460 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR-IDHIMLSPEA 232 Q +++ T + T++ Y K G R +DHI Sbjct: 461 TDESCFNPLHQVMKDARATAPVTDQEATYNGY-----------KTSGTRKLDHIFYDNGC 509 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPV 257 + + + + G SDH PV Sbjct: 510 VASI--FQTLKENYGAPYISDHYPV 532 >gi|154270260|ref|XP_001535986.1| predicted protein [Ajellomyces capsulatus NAm1] gi|150410057|gb|EDN05445.1| predicted protein [Ajellomyces capsulatus NAm1] Length = 987 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 28/75 (37%), Gaps = 8/75 (10%) Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 + W G ID LSP L I + K SDH P+ +L++ Sbjct: 467 TTWQDRGSP-----GTTIDLTFLSPLLHDKLRRCAIAEEA---CKGSDHKPMETTLELTP 518 Query: 266 PRKKQQDSTSQNMKP 280 K+ + +N +P Sbjct: 519 IPKEAERRNWKNAEP 533 >gi|154287936|ref|XP_001544763.1| predicted protein [Ajellomyces capsulatus NAm1] gi|150408404|gb|EDN03945.1| predicted protein [Ajellomyces capsulatus NAm1] Length = 359 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 28/75 (37%), Gaps = 8/75 (10%) Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 + W G ID LSP L I + K SDH P+ +L++ Sbjct: 78 TTWQDRGSP-----GTTIDLTFLSPLLHDKLRRCAIAEEA---CKGSDHKPMETTLELTP 129 Query: 266 PRKKQQDSTSQNMKP 280 K+ + +N +P Sbjct: 130 IPKEAERRNWKNAEP 144 >gi|154271554|ref|XP_001536630.1| predicted protein [Ajellomyces capsulatus NAm1] gi|150409300|gb|EDN04750.1| predicted protein [Ajellomyces capsulatus NAm1] Length = 1163 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 28/75 (37%), Gaps = 8/75 (10%) Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 + W G ID LSP L I + K SDH P+ +L++ Sbjct: 467 TTWQDRGSP-----GTTIDLTFLSPLLHDKLRRCAIAEEA---CKGSDHKPMETTLELTP 518 Query: 266 PRKKQQDSTSQNMKP 280 K+ + +N +P Sbjct: 519 IPKEAERRNWKNAEP 533 >gi|88854566|ref|ZP_01129233.1| hypothetical protein A20C1_10119 [marine actinobacterium PHSC20C1] gi|88816374|gb|EAR26229.1| hypothetical protein A20C1_10119 [marine actinobacterium PHSC20C1] Length = 302 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 42/274 (15%), Positives = 73/274 (26%), Gaps = 46/274 (16%) Query: 6 VATWNVNSIRARIHNLA---------------AWIKENNPDIICLQETKTEDKNFPFETL 50 V ++N IR R+ L + P ++ +QE F Sbjct: 43 VMSYN---IRRRLPKLLPRNPDQWRHRQPLMRRLLAAEQPALVGVQE-----ALFTQARF 94 Query: 51 --QSLNYHIETCGQKSYNGVA-----ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 Q+L H + G I + +++V D ++ T Sbjct: 95 VRQALGEHYRSLGYGRERNTGGEGCPIFYDSRRLQVVDWHQSALSDTPNVPGSTSWGNRT 154 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 + + ++ I + + R R S P P Sbjct: 155 PRVVVEAIFRDLATGIHFQAVNTHLDHRSRTSRLRSADALRN-------IVQATPHPTIM 207 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223 + D E+ + + +F +Y + RI Sbjct: 208 TGDFNTDADTHPYDELTGHGLLVDTWNTAEERLTQVWG----TFPNYGPPKHDRK---RI 260 Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257 D I+ +P T A I+ PSDH PV Sbjct: 261 DWILATPGVT--AVRAGINVTRYAGGWPSDHAPV 292 >gi|301780562|ref|XP_002925696.1| PREDICTED: sphingomyelin phosphodiesterase 2-like [Ailuropoda melanoleuca] gi|281346608|gb|EFB22192.1| hypothetical protein PANDA_015236 [Ailuropoda melanoleuca] Length = 423 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 38/300 (12%), Positives = 78/300 (26%), Gaps = 43/300 (14%) Query: 4 VTVATWNVNSI------RA-RIHNLAAWIKENNPDIICLQETKTEDK-----NFPFETLQ 51 + + N I RA R+ L ++ + D+ L+E +E T Sbjct: 9 LRLFNLNCWGIPYLSKHRADRMKRLGDFLNMESFDLALLEEVWSEQDFQYLRQKLSPTYP 68 Query: 52 SLNYH-----------IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT 100 + +Y + + P I V + Sbjct: 69 AAHYFRSGVIGSGLCIFSKHPIQEFTQHVYTLNGYPYMIHHGDWFCGKAVGLLVLRLGGL 128 Query: 101 INTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP 160 + + + +++ +F + + ++ GD N+ P+ Sbjct: 129 ELNAYVTHLHAEY---SRQKDIYLTHRVAQAWELAQFIHHTSKKADVVLLCGDLNLHPKD 185 Query: 161 HDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG 220 C W LE R + + G Sbjct: 186 LGCRLLKEWTGLHDAYLETRDFKGSEEGCTMVPENCYVNQRELE-----------PFPFG 234 Query: 221 IRIDHIMLSPEATSLLHSARIDT-----KPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTS 275 IRID+++ + S + P T SDH ++ +L + + S + Sbjct: 235 IRIDYVLY-KAVSGFYISCKTLRTTTGRDPHSGTPLSDHEALMATLCVRHSPPQHIPSPT 293 >gi|212539902|ref|XP_002150106.1| reverse transcriptase, putative [Penicillium marneffei ATCC 18224] gi|210067405|gb|EEA21497.1| reverse transcriptase, putative [Penicillium marneffei ATCC 18224] Length = 1318 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 19/58 (32%), Gaps = 4/58 (6%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 ID ++ S E + I G SDH + DI P + + P Sbjct: 383 IDLVLASTELAEEMVKCGIHYTNHG----SDHQAIETEFDISVPERPITERLLWKNAP 436 >gi|148700527|gb|EDL32474.1| Traf and Tnf receptor associated protein, isoform CRA_d [Mus musculus] Length = 349 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 43/280 (15%), Positives = 78/280 (27%), Gaps = 51/280 (18%) Query: 2 SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 S ++ TWN++ + RAR + + + +PD++ LQE P Sbjct: 101 STISFITWNIDGLDGCNLPERAR--GVCSCLALYSPDVVFLQEV------IPP------- 145 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 Y + + + ++ + G I T + L N+ L Sbjct: 146 YCAYLKKRAASYTIITGNEEGYFTAILLKKGRVKFKSQEIIPFPNTKMMRNLLCVNVSLG 205 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 T + + + + + Q +I+ D Sbjct: 206 GNEFCLMTSHLESTREHSAERIRQLKTVLGKM------------QEAPDSTTVIFAGDTN 253 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI--------DHI 226 + L + F H Y+ WD A N +RI D I Sbjct: 254 LRDQEVIKCGGLPDNVFDAWEFLGKPKHCQYT-WDTKA-----NNNLRIPAAYKHRFDRI 307 Query: 227 MLSPE---ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 E K PSDH ++ +L++ Sbjct: 308 FFRAEEGHLIPQSLDLVGLEKLDCGRFPSDHWGLLCTLNV 347 >gi|34809536|gb|AAQ82689.1| Isc1p [Candida glabrata] Length = 436 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 37/307 (12%), Positives = 82/307 (26%), Gaps = 47/307 (15%) Query: 4 VTVATWNVNSI-------RARIHNLAAWIKEN---------------------NPDIICL 35 + T+N + RAR+ LA + + + DI+ L Sbjct: 9 IKFLTFNTWGLKYVSKHRRARLRALAEKLAGHQNSNIKSLPNSEDLYADDDFEDYDIVAL 68 Query: 36 QETKTEDK----------NFPFETLQSLNY-------HIETCGQKSYNGVAILSKYQPIE 78 QE ++ FP+ L Y + + +P Sbjct: 69 QEIWCKEDWDYIVEQCGKIFPYYRWFYLEYCQALDWQYFQKFRLNQRFLYRYPINGRPSA 128 Query: 79 IVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYD-DKISWIKRFLRF 137 I + + T + + + + Y + F + Sbjct: 129 IHRGDWYVGKSIAITTLRNRENPTTPIVIMNSHMHAPYSLTGDAAYSCHRSCQAWDFAKL 188 Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA 197 A E ++ GD N P ++ + + Sbjct: 189 AKIYREAGYAVVIVGDLNSRPGSLPHNILTKEAGLIDSWEQLHGKQDLEKIRTMNAMDQL 248 Query: 198 THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK-PRGWTKPSDHTP 256 + S + + + ++ R+D+ ++ P + + + T+ G SDH Sbjct: 249 VYACTTCDSTLNTWRATRRPDEACRLDYALVDPRRLTTIKTGIKFTELIDGVGSFSDHFA 308 Query: 257 VIVSLDI 263 +L++ Sbjct: 309 YSCTLEV 315 >gi|74198542|dbj|BAE39751.1| unnamed protein product [Mus musculus] Length = 326 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 43/280 (15%), Positives = 78/280 (27%), Gaps = 51/280 (18%) Query: 2 SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 S ++ TWN++ + RAR + + + +PD++ LQE P Sbjct: 78 STISFITWNIDGLDGCNLPERAR--GVCSCLALYSPDVVFLQEV------IPP------- 122 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 Y + + + ++ + G I T + L N+ L Sbjct: 123 YCAYLKKRAASYTIITGNEEGYFTAILLKKGRVKFKSQEIIPFPNTKMMRNLLCVNVSLG 182 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 T + + + + + Q +I+ D Sbjct: 183 GNEFCLMTSHLESTREHSAERIRQLKTVLGKM------------QEAPDSTTVIFAGDTN 230 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI--------DHI 226 + L + F H Y+ WD A N +RI D I Sbjct: 231 LRDQEVIKCGGLPDNVFDAWEFLGKPKHCQYT-WDTKA-----NNNLRIPAAYKHRFDRI 284 Query: 227 MLSPE---ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 E K PSDH ++ +L++ Sbjct: 285 FFRAEEGHLIPQSLDLVGLEKLDCGRFPSDHWGLLCTLNV 324 >gi|9507213|ref|NP_062424.1| tyrosyl-DNA phosphodiesterase 2 [Mus musculus] gi|67462082|sp|Q9JJX7|TYDP2_MOUSE RecName: Full=Tyrosyl-DNA phosphodiesterase 2; Short=Tyr-DNA phosphodiesterase 2; AltName: Full=5'-tyrosyl-DNA phosphodiesterase; Short=5'-Tyr-DNA phosphodiesterase; AltName: Full=TRAF and TNF receptor-associated protein gi|8247283|emb|CAB92971.1| putative TRAF and TNF receptor associated protein [Mus musculus] gi|56237843|emb|CAI26084.1| Traf and Tnf receptor associated protein [Mus musculus] gi|124376774|gb|AAI32512.1| TRAF and TNF receptor associated protein [Mus musculus] gi|124376776|gb|AAI32514.1| TRAF and TNF receptor associated protein [Mus musculus] gi|148700528|gb|EDL32475.1| Traf and Tnf receptor associated protein, isoform CRA_e [Mus musculus] Length = 370 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 43/280 (15%), Positives = 78/280 (27%), Gaps = 51/280 (18%) Query: 2 SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 S ++ TWN++ + RAR + + + +PD++ LQE P Sbjct: 122 STISFITWNIDGLDGCNLPERAR--GVCSCLALYSPDVVFLQEV------IPP------- 166 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 Y + + + ++ + G I T + L N+ L Sbjct: 167 YCAYLKKRAASYTIITGNEEGYFTAILLKKGRVKFKSQEIIPFPNTKMMRNLLCVNVSLG 226 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 T + + + + + Q +I+ D Sbjct: 227 GNEFCLMTSHLESTREHSAERIRQLKTVLGKM------------QEAPDSTTVIFAGDTN 274 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI--------DHI 226 + L + F H Y+ WD A N +RI D I Sbjct: 275 LRDQEVIKCGGLPDNVFDAWEFLGKPKHCQYT-WDTKA-----NNNLRIPAAYKHRFDRI 328 Query: 227 MLSPE---ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 E K PSDH ++ +L++ Sbjct: 329 FFRAEEGHLIPQSLDLVGLEKLDCGRFPSDHWGLLCTLNV 368 >gi|299145368|ref|ZP_07038436.1| putative transmembrane endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_23] gi|298515859|gb|EFI39740.1| putative transmembrane endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_23] Length = 366 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 45/272 (16%), Positives = 82/272 (30%), Gaps = 33/272 (12%) Query: 3 VVTVATWNVNSIR------ARIHNLAAWIKENNPDIICLQETKTEDK---NFPFETLQSL 53 ++TVAT+NV++ + +A++++ DI+C QE D+ + L Sbjct: 109 ILTVATYNVDAFNHEHTGYSC-KEIASYMRNLQADILCFQEFGINDEFGVDSIAAVLSDW 167 Query: 54 NYHIETCGQKSYNGV------AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107 Y+ + N + K + + + L T + L+ Sbjct: 168 PYYYIPISPEGKNLLQLAVFSRYPIKEENLIVYPDSKNCSLWCDIETNARTIRLFNNHLQ 227 Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167 + + DD + L E + Y I Sbjct: 228 TTEVSQNKRKLEKGLRTDDSQRVERAALGLIDGLHENFRKRAVQANTLKQLIAASPYPTI 287 Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227 I D + + H +Y+F + K+ +RID+I+ Sbjct: 288 I-CGDFNSLPSSYVYHTVKGDKLQDGFQTSGHGY--MYTF------KFFKHL-LRIDYIL 337 Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 SPE S SDH PV++ Sbjct: 338 HSPEVNST-------DYFSPDLTYSDHNPVVM 362 >gi|270293069|ref|ZP_06199280.1| RgfB protein [Streptococcus sp. M143] gi|270279048|gb|EFA24894.1| RgfB protein [Streptococcus sp. M143] Length = 271 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 31/273 (11%), Positives = 79/273 (28%), Gaps = 16/273 (5%) Query: 4 VTVATWNVNSI--RARIHNLAAWIKEN---NPDIICLQETK-------TEDKNFPFETLQ 51 + T N +S + +++ + D+IC QE E + Sbjct: 1 MKFLTLNTHSWMEKEAEEKFQLLLQDILDKDYDLICFQEINQEITSPEVEVDHLYQALPA 60 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 + H + + ++ K + G D + I + I + + + ++ Sbjct: 61 AEPIHQDHYVRLLVEKLSEKGKNYYWTWAYNHIGYDRYHEGVAILSKTPIKAREILVSDV 120 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG-DYNIIPQPHDCYNPIIWE 170 P + + K + + + + + + + + Sbjct: 121 DDPTDYHTRRVALAETVVEGKELALASVHLSWWNKGFQEEWARFEDVLKDLNKPLILAGD 180 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230 + E Q+ + DA + Y+ + +RID++ + Sbjct: 181 FNNPAGQEGYQAILASP-LDLQDAFEVAKERSGSYTVPPEIDGWKGNTEPLRIDYVFTTK 239 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 E + S + + + SDH + L+ Sbjct: 240 ELE--VESLHVVFDGQNSPQVSDHYGLNAVLNW 270 >gi|73984049|ref|XP_540938.2| PREDICTED: similar to CCR4 carbon catabolite repression 4-like [Canis familiaris] Length = 474 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 37/263 (14%), Positives = 65/263 (24%), Gaps = 28/263 (10%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFE--TLQSLNYHIETCGQKSYNGVAILSKYQPIE 78 + I PDI+CLQE D F L L Y + S +E Sbjct: 222 ILEEILAYQPDILCLQEV---DHYFDTFQPLLSRLGYQGTFFPKP-------WSPCLDVE 271 Query: 79 IVTHLPGD--DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 G + + I + + + + + + L+ Sbjct: 272 HNNGPDGCALFFLQNRFKLVNSANIRLTAMTLKTNQVAIVQTLECKESSRQFCIAVTHLK 331 Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN----MGFT 192 + N+ P+I D + Sbjct: 332 ARTGWERFRSAQGCDLLQNLQNITQGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAY 391 Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS------PEATSLLHSARIDTKPR 246 + A + Y+ W ++ +D+I S A LL +I Sbjct: 392 KLLSADGQSEPPYTTWKIRTSGECRHT---LDYIWYSKHALSVKSALDLLTEEQIGPNRL 448 Query: 247 -GWTKPSDHTPVIVSLDIPEPRK 268 + PSDH ++ E Sbjct: 449 PSFNYPSDHLSLVCDFSFNEEPD 471 >gi|305666984|ref|YP_003863271.1| putative secreted protein [Maribacter sp. HTCC2170] gi|88709217|gb|EAR01451.1| probable secreted protein [Maribacter sp. HTCC2170] Length = 258 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 33/271 (12%), Positives = 76/271 (28%), Gaps = 51/271 (18%) Query: 3 VVTVATWNV-------NSIRARIHNLAAWIKENNPDIICLQET-----KTEDKNFPFETL 50 + V ++N+ N + +A I + NPD++ LQE + + + P E Sbjct: 23 TLRVMSFNILHGATTKNDFN--LDTIAGVINKYNPDLVALQEVDFKTNRAKKYDLPTEI- 79 Query: 51 QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 + + ++ + +T + +++ + ++ N Sbjct: 80 -GFRTKMASLFARAMYYDGGEYGEAVLSNLTFIGSENISLPHLPTSEPRAALLTRVKTRN 138 Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170 + D + + + P + GD N P Sbjct: 139 GNIIQFVGTHLDHLRDDTDRLMQAKAINEALGSTKYPTLLVGDLNDGPNSETIRILSENF 198 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230 + +++ + +K +DHI+L+ Sbjct: 199 HK----PQLQAAKKKTWPADEPKVC---------------------------LDHILLTN 227 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + ID + SDH V+ +L Sbjct: 228 PKKWKV----IDYEVICENYASDHCIVVATL 254 >gi|241723616|ref|XP_002413718.1| hypothetical protein IscW_ISCW012237 [Ixodes scapularis] gi|215507534|gb|EEC17026.1| hypothetical protein IscW_ISCW012237 [Ixodes scapularis] Length = 232 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 33/111 (29%), Gaps = 5/111 (4%) Query: 9 WNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGV 68 WN N +R R+ + + D++ +QE K L Y + TC N Sbjct: 83 WNSNGLRGRLAQVRDELSRRPYDVLLIQEPKA-----DVADLNISGYTLHTCCGAKKNPC 137 Query: 69 AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 AI + D +A + Q + Y+ Sbjct: 138 AIPYVNNSLPHCGIDTRDYCSARAEIVGVRIRRGEQEFSVFTCYVHLVGQW 188 Score = 44.8 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 20/220 (9%), Positives = 50/220 (22%), Gaps = 19/220 (8%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL---NYHIETCGQ 62 + WN+N + R+ ++ + D++ +QE K E S Sbjct: 21 ILQWNINGLCGRLAHVRDELLRRPYDVLLIQEPKLEASKLDISGYTSYTCCGAKKHPWAV 80 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 +N + + + E + + L+ G Sbjct: 81 LYWNSNGLRGRLAQV---RDELSRRPYDVLLIQEPKADVADLNISGYTLHTCCGAKKNPC 137 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + ++ I + + + + Sbjct: 138 AIPYVNNSLPHCGIDTRDYCSARAEIV---GVRIRRGEQEFSVFTCYVHLVGQWRSRAHA 194 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR 222 + G + + L W N+ +R Sbjct: 195 TIRATETGHIILGGDFNAHNEL----------WGTNRRMR 224 >gi|291401220|ref|XP_002716984.1| PREDICTED: CCR4 carbon catabolite repression 4-like [Oryctolagus cuniculus] Length = 426 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 37/263 (14%), Positives = 65/263 (24%), Gaps = 28/263 (10%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFE--TLQSLNYHIETCGQKSYNGVAILSKYQPIE 78 + I PDI+CLQE D F L L Y + S +E Sbjct: 174 ILEEILAYQPDILCLQEV---DHYFDTFQPLLSRLGYQGTFFPKP-------WSPCLDVE 223 Query: 79 IVTHLPGD--DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 G + + I + + + + + + L+ Sbjct: 224 HNNGPDGCALFFLQNRFKLVNSANIRLTAMTLKTNQVAIAQTLECKESGRQFCIAVTHLK 283 Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN----MGFT 192 + N+ P+I D + Sbjct: 284 ARTGWERFRSAQGCDLLQNLQNITQGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAY 343 Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP------EATSLLHSARIDTKPR 246 + A + Y+ W ++ +D+I S A LL +I Sbjct: 344 KLLSADGQSEPPYTTWKIRTSGECRHT---LDYIWYSKHALSVRSALDLLTEEQIGPNRL 400 Query: 247 -GWTKPSDHTPVIVSLDIPEPRK 268 + PSDH ++ E Sbjct: 401 PSFNYPSDHLSLVCDFSFNEESD 423 >gi|218260769|ref|ZP_03475911.1| hypothetical protein PRABACTJOHN_01575 [Parabacteroides johnsonii DSM 18315] gi|218224372|gb|EEC97022.1| hypothetical protein PRABACTJOHN_01575 [Parabacteroides johnsonii DSM 18315] Length = 353 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 32/237 (13%), Positives = 59/237 (24%), Gaps = 22/237 (9%) Query: 22 AAWIKENNPDIICLQETKTE-DKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80 AA+IK+ PDI+C QE D + ++++ ++ + Y I Sbjct: 124 AAYIKKLQPDIVCFQE--APGDGYYHRDSIRYAFDYVLYKYISRRTDHLPTTIYSRYPIH 181 Query: 81 THLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQ 140 + + + A IN Q +R+ N + + A + Sbjct: 182 SVKALYYKNSSNMSLIADVRINNQYIRVINNHFETTSVNAYRGIITAPGKSLEIRAKAVK 241 Query: 141 RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHD 200 L L+ I + + + Sbjct: 242 NLILQMKDN--NRKRAIQADSIYAEIRRSPYPVIVCGDFNDTPASYTYHRVRKGLTDGFQ 299 Query: 201 THH---LYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDH 254 Y+F + RID++ S SDH Sbjct: 300 DAGNGYQYTF-------RQLYRLWRIDYVFYSESLKG--QDCF-----SPDVSYSDH 342 >gi|32475353|ref|NP_868347.1| hypothetical protein RB8407 [Rhodopirellula baltica SH 1] gi|32445894|emb|CAD78625.1| probable secreted protein [Rhodopirellula baltica SH 1] Length = 281 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 29/265 (10%), Positives = 80/265 (30%), Gaps = 41/265 (15%) Query: 4 VTVATWNVNSIRAR-----IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 + V ++N++ R + LA I+ +PD++ +QE Sbjct: 44 LRVLSYNIHHGRGTDGKIDLDRLANVIRSVDPDLVAVQEV-------------------- 83 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 NG+ + ++ H ++ + ++ G+P Sbjct: 84 -DQNTRRNGMVNQVETLAVQTSLHGKFAKQIDYDGGEYGQAVLSKYPIESLEVHWLPGDP 142 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 I ++ + RL + ++ + N ++ + Sbjct: 143 I-----RERRIVGVAEILIHKTRLRFATTHLHHSRADLREKQATELNRLLACGSTPVIIA 197 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 + + T + T + + + +D++ + P + + Sbjct: 198 GDFNAKPASLAMQTLQAKWRIATTESMHTFPARSPNRQ------LDYVAMYPANSWRIVE 251 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263 + + +P SDH P++V +++ Sbjct: 252 SEVLDEP----VASDHRPLLVEIEL 272 >gi|32475548|ref|NP_868542.1| hypothetical protein RB8783 [Rhodopirellula baltica SH 1] gi|32446090|emb|CAD75919.1| conserved hypothetical protein [Rhodopirellula baltica SH 1] Length = 321 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 37/286 (12%), Positives = 73/286 (25%), Gaps = 61/286 (21%) Query: 7 ATWNVNSIRA---------RIHNLAAWIKENNPDIICLQETKTE---------------- 41 T+N+ + R + I D++ LQE + Sbjct: 67 MTYNIRYLNTHDRQDLWSMRRSKVIETIAS--ADVVGLQEVTVQQLHDIQEGTPEWTWYG 124 Query: 42 ---DKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT 98 D + Y + +G LS+ + + Sbjct: 125 VGRDDGKEGGEFAPIGYR-HDRFEAMDHGTLWLSETPTVVGSKGWDAALPRTMTWMVLRR 183 Query: 99 FTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP 158 + L I + + G R + + + P+I GD+N +P Sbjct: 184 KLDRAEFLVINSHFDHRGQNA--------REQSGRLVAAEVDQRATDLPVIVMGDFNAMP 235 Query: 159 QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN 218 E + G + +A Sbjct: 236 DSAPLKALQSGEKVKLLDARDEVDGKPTGPTGTWNGFKAIQPD----------------- 278 Query: 219 KGIRIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 RIDH++++ + R +D + SDH P+ + +D+ Sbjct: 279 --RRIDHVLVNDRVV--VQEYRTLDPRTEAGRYASDHLPIAIRIDL 320 >gi|163739629|ref|ZP_02147038.1| endonuclease/exonuclease/phosphatase family protein [Phaeobacter gallaeciensis BS107] gi|161387088|gb|EDQ11448.1| endonuclease/exonuclease/phosphatase family protein [Phaeobacter gallaeciensis BS107] Length = 241 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 33/267 (12%), Positives = 67/267 (25%), Gaps = 52/267 (19%) Query: 4 VTVATWNVN---SI--RARIHNLAAWIKENNPDIICLQET--KTED--KNFPFETLQSLN 54 + +A++N+ + R R I+ D++ LQE + P L Sbjct: 12 LRLASYNIQKSVGLDLRRRPRRTLQVIEGTGADLVLLQEADKRLPPRPAALPHFVLDEAG 71 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 + I G A + ++ G +L + + L Sbjct: 72 WQIV------DLGGAGSLGWHGNAVIWRGDGIELQDHGHIPLPGLEPRGAVWALFHTGLG 125 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 + + + + E+ A P+ + D Sbjct: 126 PLRVVGAH-------------LGLTTKARHEQVHHLAEVIAREPELPTVWAGDFN--DWS 170 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 + +L+ + + A +D I +S Sbjct: 171 RQPVLDHLAPQLRFVPPRASFPALRPMGA-------------------LDRIAVSAGLE- 210 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261 + + + R SDH PV L Sbjct: 211 -VVDSGVYR-TRPAHIASDHLPVWADL 235 >gi|110680975|ref|YP_683982.1| hypothetical protein RD1_3833 [Roseobacter denitrificans OCh 114] gi|109457091|gb|ABG33296.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114] Length = 227 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 10/62 (16%) Query: 4 VTVATWNVN---SI--RARIHNLAAWIKENNPDIICLQE----TKTEDKNFPFETLQ-SL 53 + +A++N+ + R +A + E + D++ LQE T T P E L+ L Sbjct: 1 MKIASYNIRKAVGLDWRRDPDRVADVLLEIDADVVVLQEADRRTGTRAGVLPLERLEDEL 60 Query: 54 NY 55 Y Sbjct: 61 GY 62 >gi|300704421|ref|YP_003746024.1| hypothetical protein RCFBP_20225 [Ralstonia solanacearum CFBP2957] gi|299072085|emb|CBJ43417.1| conserved protein of unknown function, endonuclease/exonuclease/phosphatase family [Ralstonia solanacearum CFBP2957] Length = 289 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 44/308 (14%), Positives = 84/308 (27%), Gaps = 68/308 (22%) Query: 1 MSVVTVATWNV------NSIRARIHNLAAWIKENNP-DIICLQETKTEDKNFP------- 46 M + + TWN+ + R + + A + P DI+CLQE + N P Sbjct: 1 MGTI-ILTWNIQWGRGADG-RVDLPRMLAEARAMGPFDILCLQEVTSGFGNLPGRPGDDQ 58 Query: 47 -FETLQSLNYHI----------ETCGQKSYNGVAILSKYQPIEIVTHLPGD----DLDVQ 91 E +L + G AI ++ + + H + Sbjct: 59 WRELAGTLGPAFTLIDGIALERHEGARIQRFGNAIATRLPVLHVARHALPCPAAACPTMP 118 Query: 92 ARFIEATFTINTQTLRIGNLYLPHGNP---------------ITSTKYDDKISWIKRFLR 136 IEA LR+ + +L + + + + Sbjct: 119 RMAIEAIVQAPFGPLRVISTHLEYYSETQRIAQIDALRALHVEGWMRAAHPPTLGPEPAD 178 Query: 137 FASQRLELEEPLIFAGDYNIIPQ--PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDA 194 + L + GD+N P P A + Sbjct: 179 GPFRPLAQTHATVICGDFNCKPDSTPKRLATVPFSHETATLYDAWEVAHGPAPQPPTFGV 238 Query: 195 IRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDH 254 T Y+ D +++S + + ++ T+ SDH Sbjct: 239 HDRAGWTEPAYAC----------------DFMLISEPLKTRVARVEVN----SVTQASDH 278 Query: 255 TPVIVSLD 262 P+++ L+ Sbjct: 279 QPMLLELN 286 >gi|257466188|ref|ZP_05630499.1| Endonuclease/exonuclease/phosphatase [Fusobacterium gonidiaformans ATCC 25563] Length = 265 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 43/272 (15%), Positives = 80/272 (29%), Gaps = 17/272 (6%) Query: 4 VTVATWNVNSIRARIHN------LAAWIKENNPDIICLQET--KTEDKNFPFETLQSLNY 55 + + T NV+S LA I E D+I LQE K E + E + Sbjct: 1 MKLLTINVHSW-LEEKQEEKMELLAKVIAEKRYDVIALQEVNQKIEARLLKGEIREDNFL 59 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLP--GDDLDVQARFIEATFTINTQTLRIGNLYL 113 + + Y + I + G L + +E T + + ++ Sbjct: 60 YQLCKKIEKYTEEKYEYHWSHSHIGFDIYEEGIALLTRHSILEKEDFYCTNSKTVYSISS 119 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 I + + K +E + + DA Sbjct: 120 RKIVKI-FLEIEGKEIEFYSCHMNLPDCIEENMEQNIQNILKHSSRNCLKILMGDFNTDA 178 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 Q + + D +Y + +S + R+D+I L+ + Sbjct: 179 FHDESSYQKILEQGLFDSYTLSKKKDDGVTVYKNISGWENSVEEK---RLDYIFLTEQYE 235 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 + S+ + + + SDH + V L I E Sbjct: 236 --VESSYVIFNGKNYPCISDHNGLEVILKIKE 265 >gi|317504528|ref|ZP_07962503.1| endonuclease/exonuclease/phosphatase [Prevotella salivae DSM 15606] gi|315664350|gb|EFV04042.1| endonuclease/exonuclease/phosphatase [Prevotella salivae DSM 15606] Length = 283 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 35/272 (12%), Positives = 69/272 (25%), Gaps = 35/272 (12%) Query: 8 TWNV-----------NSIRARIHNLAAWIKENNPDIICLQET---KTEDKNFPFETLQSL 53 T+N+ N+ + R +L +I P I QE + D + +L Sbjct: 26 TYNIRYNNPDDIAEGNAWKQRCPHLCDFINFEQPVIFGTQEVLVDQLHDLQKGLDHYSTL 85 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 E + + + + + + + +RI + Sbjct: 86 GVGREDGKEAGEYAAIFFKSDALKCLDSGY----FWLSETPNKPSLGWDAACIRICT-WG 140 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + + + + + A + + ++ Sbjct: 141 KFEDKASKKTFFFFNTHMDHVGTKARRESAHLILNQIKAIAKNNHVILTGDFNVDQTDEI 200 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 + ++ DY D RIDHI +S + Sbjct: 201 YKIFSDSGLLRDCYANAKQRMAPIG-------TWNDYMQDYRDM---ARIDHIFVSNDF- 249 Query: 234 SLLHSARIDTKPRGWTKP----SDHTPVIVSL 261 + I T K SDH PV+V L Sbjct: 250 -NIEHYGIFTNSYWLGKTRRNISDHYPVMVKL 280 >gi|31083028|ref|NP_036250.2| nocturnin [Homo sapiens] gi|212276446|sp|Q9UK39|NOCT_HUMAN RecName: Full=Nocturnin; AltName: Full=CCR4 protein homolog gi|109731055|gb|AAI13495.1| CCR4 carbon catabolite repression 4-like (S. cerevisiae) [Homo sapiens] gi|109731718|gb|AAI13501.1| CCR4 carbon catabolite repression 4-like (S. cerevisiae) [Homo sapiens] gi|119625534|gb|EAX05129.1| CCR4 carbon catabolite repression 4-like (S. cerevisiae), isoform CRA_a [Homo sapiens] gi|119625536|gb|EAX05131.1| CCR4 carbon catabolite repression 4-like (S. cerevisiae), isoform CRA_a [Homo sapiens] Length = 431 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 37/263 (14%), Positives = 65/263 (24%), Gaps = 28/263 (10%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFE--TLQSLNYHIETCGQKSYNGVAILSKYQPIE 78 + I PDI+CLQE D F L L Y + S +E Sbjct: 179 ILEEILAYQPDILCLQEV---DHYFDTFQPLLSRLGYQGTFFPKP-------WSPCLDVE 228 Query: 79 IVTHLPGD--DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 G + + I + + + + + + L+ Sbjct: 229 HNNGPDGCALFFLQNRFKLVNSANIRLTAMTLKTNQVAIAQTLECKESGRQFCIAVTHLK 288 Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN----MGFT 192 + N+ P+I D + Sbjct: 289 ARTGWERFRSAQGCDLLQNLQNITQGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAY 348 Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP------EATSLLHSARIDTKPR 246 + A + Y+ W ++ +D+I S A LL +I Sbjct: 349 KLLSADGQSEPPYTTWKIRTSGECRHT---LDYIWYSKHALNVRSALDLLTEEQIGPNRL 405 Query: 247 -GWTKPSDHTPVIVSLDIPEPRK 268 + PSDH ++ E Sbjct: 406 PSFNYPSDHLSLVCDFSFTEESD 428 >gi|7670468|dbj|BAA95085.1| unnamed protein product [Mus musculus] gi|148681069|gb|EDL13016.1| angel homolog 2 (Drosophila), isoform CRA_b [Mus musculus] Length = 212 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 31/97 (31%), Gaps = 5/97 (5%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73 R N+ IK + D++CLQE ++ ++ E L+SL YH E + Sbjct: 31 RFPNILKEIKHFDADVLCLQEV--QEDHYGTEIRPSLESLGYHCEYKMKTGRKPDGCAIC 88 Query: 74 YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 ++ + L + Sbjct: 89 FKHSRFSLLSVNPVEFCRRDIPLLDRDNIGLVLLLQP 125 >gi|17545927|ref|NP_519329.1| hypothetical protein RSc1208 [Ralstonia solanacearum GMI1000] gi|17428222|emb|CAD14910.1| probable metal-dependent hydrolase protein [Ralstonia solanacearum GMI1000] Length = 289 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 35/302 (11%), Positives = 72/302 (23%), Gaps = 58/302 (19%) Query: 1 MSVVTVATWNV------NSIRARIHNLAAWIKENNP----DIICLQETKTEDKNFPF--- 47 M + + TWN+ + R+ L+ + E D++CLQE + + P Sbjct: 1 MGTI-ILTWNIQWGRGADG---RVD-LSRMLAEARAMGSFDVLCLQEVTSGFGHLPGQPG 55 Query: 48 -----ETLQSLNYHI----------ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQA 92 E +L Q G AI ++ + + H D Sbjct: 56 EDQWQELAGALGQAFTLIDGIALERHEGAQIRRFGNAIATRLPVLHVARHALPCPADAGP 115 Query: 93 RFIEATF-----------TINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQR 141 + + L + + Sbjct: 116 TMPRMAIEAIVQAPFGPLRVVSTHLEYYSETQRIAQIDALRALHVEGCMRAAHPPTLGPE 175 Query: 142 LELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT 201 A + P ++ T Sbjct: 176 PTDGPFRPLAQTRATVICGDFNCKPDSKPKRLATVPFSHEAAALYDAWETAHGPTPQPPT 235 Query: 202 HHLY--SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 ++ + W A + D +++S + + ++ T+ SDH P ++ Sbjct: 236 FGVHDRTGWTEPAYA--------CDFMLVSEPLKTRVTRVEVN----STTQASDHQPTLL 283 Query: 260 SL 261 L Sbjct: 284 EL 285 >gi|74143502|dbj|BAE28819.1| unnamed protein product [Mus musculus] Length = 429 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 35/262 (13%), Positives = 68/262 (25%), Gaps = 28/262 (10%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFE--TLQSLNYHIETCGQKSYNGVAILSKYQPIE 78 + I PDI+CLQE D F L L Y + S +E Sbjct: 177 ILEEILAYQPDILCLQEV---DHYFDTFQPLLSRLGYQGTFFPKP-------WSPCLDVE 226 Query: 79 IVTHLPGD--DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 G + ++ I + + + + + + L+ Sbjct: 227 HNNGPDGCALFFLQNRFKLISSTNIRLTAMTLKTNQVAIAQTLECKESGRQFCIAVTHLK 286 Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN----MGFT 192 + N+ P+I D + Sbjct: 287 ARTGWERFRSAQGCDLLQNLQNITQGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAY 346 Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR------ 246 + + Y+ W ++ +D+I S A S+ + + T+ + Sbjct: 347 KLLSPDGQSEPPYTTWKIRTSGECRHT---LDYIWYSRHALSVTSALDLLTEEQIGPNRL 403 Query: 247 -GWTKPSDHTPVIVSLDIPEPR 267 + PSDH ++ E Sbjct: 404 PSFHYPSDHLSLVCDFSFNEEP 425 >gi|330801193|ref|XP_003288614.1| hypothetical protein DICPUDRAFT_79391 [Dictyostelium purpureum] gi|325081341|gb|EGC34860.1| hypothetical protein DICPUDRAFT_79391 [Dictyostelium purpureum] Length = 548 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 4/42 (9%) Query: 1 MSVVTVATWNV--NSI--RARIHNLAAWIKENNPDIICLQET 38 ++T T+NV +S R R + L I++ NPDIICLQE Sbjct: 246 FKILTYITFNVWFDSFLWRERANQLFKLIQDKNPDIICLQEV 287 >gi|242825438|ref|XP_002488440.1| reverse transcriptase [C. elegans], putative [Talaromyces stipitatus ATCC 10500] gi|218712258|gb|EED11684.1| reverse transcriptase [C. elegans], putative [Talaromyces stipitatus ATCC 10500] Length = 1129 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 20/56 (35%), Gaps = 3/56 (5%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278 ID + S + + S DTKP W DH P+ D+ R N Sbjct: 180 IDLVWASHNLANRVVSC--DTKPEWWYGA-DHVPISTQFDLTAIRVPPLVRKQWNA 232 >gi|146419034|ref|XP_001485482.1| hypothetical protein PGUG_03211 [Meyerozyma guilliermondii ATCC 6260] Length = 290 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 35/265 (13%), Positives = 59/265 (22%), Gaps = 45/265 (16%) Query: 17 RIHNLAAWIK---ENNPDIICLQE-TKTEDKNF-----PFETLQSLN--------YHIET 59 R + IK +P I+ LQE + + + P + Y Sbjct: 53 RKAGVIDSIKNYTSQHPTIVGLQEALRGQLDDIMKGLGPEWKFFGVGGSGDTKGEYCPII 112 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 + V +K+ G + A + I Sbjct: 113 YKSNEWELVNGTTKWLSETPDKPSRGYGSKYERIVTFAELRHVSSGRTIHYFNTHLDPHD 172 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 +Y+ R + P+ GD+N A + Sbjct: 173 DHVRYE-----SVRDIITYVNHTRQGSPVFLGGDFNAKRTSAPYKYVATQMTPALIAPDP 227 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML-SPEATSLLHS 238 + + H ID I + + Sbjct: 228 --KGVDNKEKSTNSGFQFNHPKT--------------------IDFIFFQDHGSKVKVDL 265 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263 I + G SDH+PVI I Sbjct: 266 YEILSSTSGNVVISDHSPVIADFSI 290 >gi|3859942|gb|AAC72921.1| putative endonuclease/reverse transcriptase [Lymantria dispar] Length = 998 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 36/258 (13%), Positives = 66/258 (25%), Gaps = 38/258 (14%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + T+N NS+ + + +++E+ DI+ +QET L+ N Sbjct: 14 LKIGTFNANSLTQQKDEVGTFLREHQLDILLVQET----------FLKPFNKDPRVANYN 63 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 S I L I R+ +++ Sbjct: 64 IVRNDRTTSPMGGTLIYY---KRSLHCTPVDPPPLMYIEASICRLALSGHQPITLVSAYL 120 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 ++ + + LEL +I GD N C + + Sbjct: 121 SPNREHSKQLVEKDLKALLELGGAVIIGGDLNAKNTSWSCQSSNKRGKTLELFADRLGFD 180 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +H +D +L L S + Sbjct: 181 VIAPIEPTHFPFNVSHRPDI-------------------LDIFLL-KNINLRLCSIEVQH 220 Query: 244 KPRGWTKPSDHTPVIVSL 261 + SDH PV + L Sbjct: 221 ELD-----SDHRPVTLEL 233 >gi|124360723|gb|ABN08700.1| Endonuclease/exonuclease/phosphatase [Medicago truncatula] Length = 814 Score = 47.5 bits (111), Expect = 0.002, Method: Composition-based stats. Identities = 31/273 (11%), Positives = 71/273 (26%), Gaps = 34/273 (12%) Query: 4 VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + WNV + ++ +N D+ L ET+ + F + S+ + Sbjct: 518 MKLVCWNVRGCNKPFKQKEIKNFLLKNKFDMCILVETRIKADKF--NKISSMIFKRWPVL 575 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 + V + QA E +++ +Y + Sbjct: 576 NNYDSAANGRIWVSWNPTVLDVKPIASSAQAIHCEVDNLTSSECFNFVAVYAFNTLEQRK 635 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 ++ + R + L+ N + Sbjct: 636 ELWNFIAHTSAQNSRNLLIGGDFNNVLLVDDRRN-------------------GNPVTQH 676 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYY-ADSWSKNKGIRIDHIMLSPEATSLLHSA- 239 Q + + + Y++ + + +K ID + + +A Sbjct: 677 EIQDFSDCLLHNRLSEVRTIGDYYTWCNNQTSGDRIYSK---IDRFIANTSWLQKFTNAV 733 Query: 240 -RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271 + K SDH P+ + + P K Sbjct: 734 GEVLPK-----GVSDHCPISMDMSCPASPKNTP 761 >gi|284034607|ref|YP_003384538.1| endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836] gi|283813900|gb|ADB35739.1| Endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836] Length = 266 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 39/272 (14%), Positives = 74/272 (27%), Gaps = 26/272 (9%) Query: 4 VTVATWNVNSIR-----ARIHNLAAWIKENNPDIICLQETKTE-DKNFPFETLQSLNYHI 57 + V TWNV R R + ++E + D+I LQE + + N + L H Sbjct: 1 MRVLTWNVW-WRFGPWQRRADAILTVLREADADLIGLQEVWAQGNDNQAAQLASELGLHW 59 Query: 58 ETC---GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 + + + D G + Sbjct: 60 TFEPLANPEPWQRRLGDRSVAIGNAILSRRPIDDRAVLELPGPEQRSALFASTGGVPFFT 119 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ-PHDCYNPIIWENDA 173 T + ++ F ++ P + GD+N +P + A Sbjct: 120 THLEAPITASAIRCEQVRALAGFVAEHSRAAHPPVITGDFNALPDSDELRLFSGVRTAPA 179 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML---SP 230 L + +++ + + +F R+D+I + Sbjct: 180 VPGLVLIDAWEYAEPGQPAATWDTANPHVAA-TFTPS----------ARVDYIHVGVPGR 228 Query: 231 EATSLLHSA-RIDTKPRGWTKPSDHTPVIVSL 261 + + R P PSDH V+ L Sbjct: 229 NGAGHVTAVRRTGAAPVDGVWPSDHAAVVAEL 260 >gi|145354287|ref|XP_001421421.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|145354354|ref|XP_001421452.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144581658|gb|ABO99714.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144581689|gb|ABO99745.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 401 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 48/284 (16%), Positives = 84/284 (29%), Gaps = 42/284 (14%) Query: 17 RIHNLAAWIKENNPDIICLQET--KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKY 74 R+ + I + D++ LQE K + F L + Y KS + + + Sbjct: 121 RLQLVLEDILRSKADVVALQEVDKKYHETLFVP-VLTANGYIATDWVGKSGQTLEGCAMF 179 Query: 75 QPIEIV-------------------THLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + DD + + T Q R+ Sbjct: 180 FALSKFESIEREEAIKLTEIGDKALRRWIADDDNAELAMALKKITSIAQLARVKVRASGK 239 Query: 116 GNPITSTKYDDKISWIK------RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 + +T + + +PL+ GD+N P+ Sbjct: 240 SLCVGNTHLFFHPGAMHLRVLQAHEFTTRATAFAAGDPLVLCGDFNGEPEDGVIRYLTKG 299 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHD--THHLYSFWDYYADSWSKNKGIRIDHIM 227 E A VR S + +G +R + + W Y + G +D++ Sbjct: 300 EISASDEDWVRGSLFRAVPIGCGAHLRTARPLFSAGGFLEWTNYVGGF---VGA-LDYVW 355 Query: 228 LS-PEATSLLHS-----ARI--DTKPRGWTKPSDHTPVIVSLDI 263 S + S S + + T PSDH PVIV +D+ Sbjct: 356 CSTSDFASRATSPLPDMSAVLAHTALPNAQFPSDHIPVIVDVDL 399 >gi|33563248|ref|NP_033964.1| nocturnin [Mus musculus] gi|17380366|sp|O35710|NOCT_MOUSE RecName: Full=Nocturnin; AltName: Full=CCR4 protein homolog gi|5924314|gb|AAD56547.1|AF183960_1 carbon catabolite repression 4 protein homolog [Mus musculus] gi|9885278|gb|AAG01384.1|AF199491_1 NOCTURNIN [Mus musculus] gi|26352748|dbj|BAC40004.1| unnamed protein product [Mus musculus] gi|148703247|gb|EDL35194.1| CCR4 carbon catabolite repression 4-like (S. cerevisiae), isoform CRA_c [Mus musculus] gi|187952215|gb|AAI39370.1| CCR4 carbon catabolite repression 4-like (S. cerevisiae) [Mus musculus] gi|223461128|gb|AAI39371.1| CCR4 carbon catabolite repression 4-like (S. cerevisiae) [Mus musculus] Length = 429 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 35/262 (13%), Positives = 68/262 (25%), Gaps = 28/262 (10%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFE--TLQSLNYHIETCGQKSYNGVAILSKYQPIE 78 + I PDI+CLQE D F L L Y + S +E Sbjct: 177 ILEEILAYQPDILCLQEV---DHYFDTFQPLLSRLGYQGTFFPKP-------WSPCLDVE 226 Query: 79 IVTHLPGD--DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 G + ++ I + + + + + + L+ Sbjct: 227 HNNGPDGCALFFLQNRFKLISSTNIRLTAMTLKTNQVAIAQTLECKESGRQFCIAVTHLK 286 Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN----MGFT 192 + N+ P+I D + Sbjct: 287 ARTGWERFRSAQGCDLLQNLQNITQGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAY 346 Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR------ 246 + + Y+ W ++ +D+I S A S+ + + T+ + Sbjct: 347 KLLSPDGQSEPPYTTWKIRTSGECRHT---LDYIWYSRHALSVTSALDLLTEEQIGPNRL 403 Query: 247 -GWTKPSDHTPVIVSLDIPEPR 267 + PSDH ++ E Sbjct: 404 PSFHYPSDHLSLVCDFSFNEEP 425 >gi|302887390|ref|XP_003042583.1| hypothetical protein NECHADRAFT_104616 [Nectria haematococca mpVI 77-13-4] gi|256723495|gb|EEU36870.1| hypothetical protein NECHADRAFT_104616 [Nectria haematococca mpVI 77-13-4] Length = 507 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 32/292 (10%), Positives = 79/292 (27%), Gaps = 42/292 (14%) Query: 4 VTVATWNV-NS----IRARIHNLAAWIKENNPDIICLQETKTEDKN----FPFETLQSLN 54 + V + N+ N + ++ + DII +QE P +L Sbjct: 225 LKVMSLNMWNGGTGVTNYHDKQV-RFMASSGADIIGIQE-----DQWGRHIPRLA-NALG 277 Query: 55 YHIETC--------GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 + + ++S V D ++ Sbjct: 278 WWGWSSGGDVGILSKYPIVEEYGVISGPSRSGGVRIELDGDQQQLNFYVAHLGYTPYGPY 337 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 ++ I + ++ LR L+ + + H + Sbjct: 338 DTCFSHMSPEKVIQREAQSGRTPQMEATLRGMKNHLDQADETPVFLVGDFNAPSHLDWVE 397 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH---HLYSF-----WDYYADSWSKN 218 + E + ++ + + G D+ R + ++ W+ ++ Sbjct: 398 GLKEKNCGYSNFRWPTSVLPEEAGLIDSFRVANPDPVKVQGTTWSPVTIWNNANRREPQD 457 Query: 219 KGIRIDHIM-------LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 RID I+ ++ T ++ + SDH V+ + ++ Sbjct: 458 ---RIDFILHKGKSLKVTDSHTVVVGDPMPIPDTKYNEWFSDHAAVLTTYEL 506 >gi|294865495|ref|XP_002764425.1| hypothetical protein Pmar_PMAR008835 [Perkinsus marinus ATCC 50983] gi|239863765|gb|EEQ97142.1| hypothetical protein Pmar_PMAR008835 [Perkinsus marinus ATCC 50983] Length = 219 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 25/80 (31%) Query: 153 DYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYA 212 NI P + ++ + K + A ++ WD Y Sbjct: 95 GINIPPTEQRKVADLWGMGRGSEDIKRWLNDMKEVDGMIDSFRLAHPSAEDRFTCWDQYR 154 Query: 213 DSWSKNKGIRIDHIMLSPEA 232 + N G RID+I++ Sbjct: 155 NRRYANAGSRIDYILVDNTI 174 >gi|300774356|ref|ZP_07084220.1| endonuclease/exonuclease/phosphatase [Chryseobacterium gleum ATCC 35910] gi|300507000|gb|EFK38134.1| endonuclease/exonuclease/phosphatase [Chryseobacterium gleum ATCC 35910] Length = 269 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 44/273 (16%), Positives = 80/273 (29%), Gaps = 31/273 (11%) Query: 4 VTVATWNVNSIRA------------RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51 +TV ++N IR R ++A + +PD +QE + Sbjct: 15 LTVMSFN---IRLNVESDKDNAWPKRKQDVADLLTYYHPDYFGVQE--ALPEQMKDIKAG 69 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL-RIGN 110 NY G+ S + + E L RI Sbjct: 70 LKNYDYIGVGRDDGKEKGEFSAIFYDTNRLDVVKSGTFWLSETPEKPSKGWDAALNRICT 129 Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170 + ++ + ++ E L + N P Sbjct: 130 YAVFKDKKSKKEFLA--MNLHFDHIGNVARVKSSELILKKIKELNPKNLPVTLSGDFNLT 187 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230 +D+ E + + F + + ++ +D ++ K+ RID+I + Sbjct: 188 DDS----EPIKILSQNMKDTFYHSETKHYGPVGTFTAFDV--NTVPKD---RIDYIF-TQ 237 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 T H I+ + PSDH PVIV L + Sbjct: 238 GFTIRSHR-HINDRRENLLYPSDHFPVIVHLSL 269 >gi|218507835|ref|ZP_03505713.1| putative endonuclease/exonuclease/phosphatase family protein [Rhizobium etli Brasil 5] Length = 149 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 45/112 (40%), Gaps = 24/112 (21%) Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E + + GF + + A ++ Y+A + ++D+I LSP + Sbjct: 40 HQPEAESALDVFSHDGFVENVMARRQPLDRWTL--YHARGPQEQHLCQLDYIWLSPALAA 97 Query: 235 L--------LHSA-----------RIDTKPR-GWTKP--SDHTPVIVSLDIP 264 + + ++ PR GW +P SDH PV+++LD+P Sbjct: 98 HNSGRLPEIIRNGQPYRTVFPPGQEVERYPRTGWDRPKASDHCPVVMTLDLP 149 >gi|254486528|ref|ZP_05099733.1| endonuclease/exonuclease/phosphatase [Roseobacter sp. GAI101] gi|214043397|gb|EEB84035.1| endonuclease/exonuclease/phosphatase [Roseobacter sp. GAI101] Length = 242 Score = 47.1 bits (110), Expect = 0.002, Method: Composition-based stats. Identities = 34/271 (12%), Positives = 67/271 (24%), Gaps = 62/271 (22%) Query: 3 VVTVATWNVN---SI--RARIHNLAAWIKENNPDIICLQE----TKTEDKNFPFETLQ-S 52 + VA++N+ + R H +A + E + D+I LQE P + L+ Sbjct: 15 TIRVASYNIRKAVGLDWRRDPHRIADVLAEVDADVIALQEADKRLGARAGVLPLQRLEAE 74 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR--IGN 110 L Y + +S ++ ++ T R + Sbjct: 75 LGY-----------RMVEVSMRPHSHGWQGNAILVRSHLRDYVAERISLPTMEPRGAVSV 123 Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170 I ++ + + + E + E Sbjct: 124 RLQEPELEIIGLHLGLTPGMRRKQMLNLQKLMAEREHPVLLAG-------------DFNE 170 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230 + S F D + G+R Sbjct: 171 WNTGRMPFAPPSTVVTPGPSFHARRP------------SAQLDRFVLGPGLR-------- 210 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 S+ + P + SDH P++V + Sbjct: 211 -----SVSSHVHQSPLS-KRASDHLPIVVDI 235 >gi|328874296|gb|EGG22662.1| hypothetical protein DFA_04792 [Dictyostelium fasciculatum] Length = 552 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 43/305 (14%), Positives = 88/305 (28%), Gaps = 53/305 (17%) Query: 3 VVTVATWNVNS----IRARIHNLAAWIKENNPDIICLQETK----------------TED 42 + T+N+ + R R + IK++ PD+I LQE + ++ Sbjct: 254 TFKLMTYNIWNYNKPWRIRSKLITDIIKDHQPDVIALQELRYSKWDGEHYKESPKLMGQE 313 Query: 43 KN-----FPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA 97 +N + +L Y+ YN + + + I++ P ++ + Sbjct: 314 RNQIQHIVNLLSFHNLKYNYYYLPSMIYNNEVDGLQMEGLGILSKHPIVKIESTKLTNDH 373 Query: 98 TFTINTQTLRIGNLYLPHGNPIT------STKYDDKISWIKRFLRFASQRLELEEPLIFA 151 R L + + + + + + P I Sbjct: 374 IDDTTDTHQRSCLLATINIDGRHLNVLTSHFSLSFQGGQRNAYEIHNWTKQYDDAPNILV 433 Query: 152 GDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYY 211 GD+N P + + ++ + T ++ D Sbjct: 434 GDFNAEP---NSHPIQFLTGKHSIKDNTGDFKDMYDTYCQSNPDNSICTTKGGITYRDVG 490 Query: 212 ADSWSKNKGIRIDHIMLSPEATSLLHSARI--------------DTKPRGWTKPSDHTPV 257 S K RID IM+ + S + +I D PSDH+ + Sbjct: 491 DVSIEK----RIDFIMVKQSSKSTTTN-QIELTNLESVGGQRFDDNGIPLSIFPSDHSGL 545 Query: 258 IVSLD 262 + + Sbjct: 546 VSTFK 550 >gi|315917346|ref|ZP_07913586.1| metal-dependent hydrolase [Fusobacterium gonidiaformans ATCC 25563] gi|313691221|gb|EFS28056.1| metal-dependent hydrolase [Fusobacterium gonidiaformans ATCC 25563] Length = 269 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 43/272 (15%), Positives = 80/272 (29%), Gaps = 17/272 (6%) Query: 4 VTVATWNVNSIRARIHN------LAAWIKENNPDIICLQET--KTEDKNFPFETLQSLNY 55 + + T NV+S LA I E D+I LQE K E + E + Sbjct: 5 MKLLTINVHSW-LEEKQEEKMELLAKVIAEKRYDVIALQEVNQKIEARLLKGEIREDNFL 63 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLP--GDDLDVQARFIEATFTINTQTLRIGNLYL 113 + + Y + I + G L + +E T + + ++ Sbjct: 64 YQLCKKIEKYTEEKYEYHWSHSHIGFDIYEEGIALLTRHSILEKEDFYCTNSKTVYSISS 123 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 I + + K +E + + DA Sbjct: 124 RKIVKI-FLEIEGKEIEFYSCHMNLPDCIEENMEQNIQNILKHSSRNCLKILMGDFNTDA 182 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 Q + + D +Y + +S + R+D+I L+ + Sbjct: 183 FHDESSYQKILEQGLFDSYTLSKKKDDGVTVYKNISGWENSVEEK---RLDYIFLTEQYE 239 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 + S+ + + + SDH + V L I E Sbjct: 240 --VESSYVIFNGKNYPCISDHNGLEVILKIKE 269 >gi|255326905|ref|ZP_05367981.1| endonuclease/exonuclease/phosphatase family protein [Rothia mucilaginosa ATCC 25296] gi|255296122|gb|EET75463.1| endonuclease/exonuclease/phosphatase family protein [Rothia mucilaginosa ATCC 25296] Length = 292 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 45/297 (15%), Positives = 87/297 (29%), Gaps = 43/297 (14%) Query: 4 VTVATWNVNS------IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETL--QSLNY 55 + T N +S I A+I LA +I E D+I LQE + + LNY Sbjct: 1 MRFLTLNTHSWCEIHQI-AKIRTLAKFIIEQQVDVIALQEV----NQLTSTPVVKEPLNY 55 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + A+L + G + + + + I + Sbjct: 56 RGGAGVPVHEDNYALLLVQAL-----NEMGATYEWTLTEAHIGWDRYDECVAILSRLPIR 110 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN--PIIWENDA 173 G + ++R A+ +E E + ++ D + + Sbjct: 111 GIKPIDMSPEYGYHQVQRRAAQAA-LIETETGTFWCATTHMSWWDFDGEPLFAQEYTRLS 169 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF---WDYYADSWSKN---------KGI 221 E + L F A + + + L + D + + + G Sbjct: 170 QALAECALTAPVLLGGDFNSAAHLSDEGYALVTSSGMVDTRSLAEHTDGENTVHREIAGW 229 Query: 222 -------RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271 RID + ++ A + SDH+ +++ +D P Q Sbjct: 230 EGNTDAKRIDFVFA-DRLLTVNSHAVVFRDN-SPEAISDHSGLLLEID-PSSWAPQS 283 >gi|239995602|ref|ZP_04716126.1| Endonuclease/exonuclease/phosphatase [Alteromonas macleodii ATCC 27126] Length = 232 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 38/273 (13%), Positives = 83/273 (30%), Gaps = 57/273 (20%) Query: 7 ATWNVN-SI-RARI---HNLAAWIKENNPDIICLQE--TK------TED-KNFPFETLQS 52 T+N++ I R + + ++ + D++ LQE T+ +D K+ E Sbjct: 1 MTYNIHSGIGRDKKHDYKRIGQFLANSGADVVLLQEMDTRPSERSTAQDVKDICAENTFK 60 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 L + G AIL+++ + T + L + N + Sbjct: 61 LIPSPAIRESDGWYGNAILTRFDVLAHDTLDVSQNGRQPRNVQIVELKTEKTPLTVVNTH 120 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 +++ + ++ L D Sbjct: 121 KGLKKLERRSQFSLLHEHLSLKMKEKQIPLV-------------------------LAGD 155 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 ++F+ L + + AT S + +A +D + +S + Sbjct: 156 FNEWQFFSKAFKALNELLLQQKVGATFP-----SHFPVFA----------LDRVWVSDDI 200 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 + + R SDH PV+V +++P+ Sbjct: 201 --KVKACRKLKNA-KTRILSDHLPVLVDIELPQ 230 >gi|228994802|ref|ZP_04154600.1| Exonuclease III [Bacillus pseudomycoides DSM 12442] gi|228764910|gb|EEM13666.1| Exonuclease III [Bacillus pseudomycoides DSM 12442] Length = 49 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 7/29 (24%), Positives = 14/29 (48%), Gaps = 2/29 (6%) Query: 4 VTVATWNVNSIRA--RIHNLAAWIKENNP 30 + +WNVN +RA +++E + Sbjct: 1 MKFISWNVNGLRAVIAKGGFIEYLEEADA 29 >gi|195996511|ref|XP_002108124.1| hypothetical protein TRIADDRAFT_20232 [Trichoplax adhaerens] gi|190588900|gb|EDV28922.1| hypothetical protein TRIADDRAFT_20232 [Trichoplax adhaerens] Length = 552 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 32/276 (11%), Positives = 72/276 (26%), Gaps = 49/276 (17%) Query: 28 NNPDIICLQETKTEDK---NFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLP 84 N DIICLQE + F ++ L Y + + + + Sbjct: 285 YNADIICLQE--CDKDIFNQFYAPFMKGLGYDGIQDSKINNREGEATFYHMDRFNMIDHH 342 Query: 85 GDDLDVQARFIEATFTINTQT---------------------------LRIGNLYLPHGN 117 + + E I L + N + Sbjct: 343 CQSIGNTLKNDEIFEQICKCPTLKYRLLNRNSIVQIVTLQPKELENIRLVVVNTHFYFRP 402 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + + S +K ++ + + + +++ GD+N P+ Sbjct: 403 QASHIRILQGYSMLKCVEKYCEKFIGNDVRVLYCGDFNSHPRTALVKLMT----TGSVQS 458 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM---------- 227 + + + ++ + + + + +D+I Sbjct: 459 NDPVWHEGGEEEFCENISLRNDKKCVSFTGYPQFTN-FVNGFVECLDYIFGQPEHFQVEQ 517 Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + P T + +A T PSDH + L + Sbjct: 518 VFPSMTEEVAAA--YTALPSVVSPSDHVAIGCDLRL 551 >gi|290562521|gb|ADD38656.1| TRAF and TNF receptor-associated protein [Lepeophtheirus salmonis] Length = 346 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 5/38 (13%) Query: 6 VATWNVNSI-RA----RIHNLAAWIKENNPDIICLQET 38 + TWNV+ + RA R+ + I++ DI+ LQE Sbjct: 95 LVTWNVDGLSRANLKVRVKAVCKIIEDTKVDIVFLQEV 132 >gi|307727145|ref|YP_003910358.1| endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1003] gi|307587670|gb|ADN61067.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1003] Length = 290 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 17/38 (44%), Gaps = 4/38 (10%) Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 D I ++ + + S +D R SDH P+ + L Sbjct: 256 DFIFVTEDLAPRVASCEVDPHSRS----SDHQPMWLEL 289 >gi|212536837|ref|XP_002148574.1| hypothetical protein PMAA_090370 [Penicillium marneffei ATCC 18224] gi|210068316|gb|EEA22407.1| hypothetical protein PMAA_090370 [Penicillium marneffei ATCC 18224] Length = 654 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 23/59 (38%), Gaps = 11/59 (18%) Query: 223 IDHIMLSPEATSLLHSA----RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQN 277 ID ++S L S ID SDH P+ LDI P+KK + + Sbjct: 252 IDLTLISNGLLERLVSCVRGDDIDHD-------SDHWPIQTVLDITVPQKKSEKRRNWK 303 >gi|86741914|ref|YP_482314.1| endonuclease/exonuclease/phosphatase [Frankia sp. CcI3] gi|86568776|gb|ABD12585.1| Endonuclease/exonuclease/phosphatase [Frankia sp. CcI3] Length = 385 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 22/63 (34%), Gaps = 21/63 (33%) Query: 222 RIDHIMLSPEATSLLHSARIDTK---------------------PRGWTKPSDHTPVIVS 260 R+D+I+LSP+ + +I R SDH + V Sbjct: 323 RLDYILLSPDLADRMTGGQIVRTGLWGDPDNKHPSAQWVIHPKITRADQAASDHAALYVD 382 Query: 261 LDI 263 LDI Sbjct: 383 LDI 385 >gi|296130666|ref|YP_003637916.1| Endonuclease/exonuclease/phosphatase [Cellulomonas flavigena DSM 20109] gi|296022481|gb|ADG75717.1| Endonuclease/exonuclease/phosphatase [Cellulomonas flavigena DSM 20109] Length = 260 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 27/269 (10%), Positives = 66/269 (24%), Gaps = 31/269 (11%) Query: 4 VTVATWNV---NSI---RARIHNLAAWIKENNPDIICLQET-----KTEDKNFPFETLQS 52 + +AT+N+ S+ R + A ++ + D++ LQE ++ + + Sbjct: 1 MRLATFNILHGRSLADGRVDLDRFADAVRRLDADVLALQEVDRAQSRSHGADLTAVAADA 60 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 + + + D + + + L Sbjct: 61 MG-----APHHRFAATLHGEPGLWVAGTGQEQPDTAAYGIALLSRRPVREWHVVALPALR 115 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 ++ + R A E + IP + + Sbjct: 116 RRTPVRFPGQRWPAFVRDEPRAALAAVVDGEGGPLTVVGTHLTFIPGWNVRQLRHLVRTT 175 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR-IDHIMLSPE 231 + A ++ + +R +DH++ P Sbjct: 176 RRLPGACVVMGDLNLAGEQPARLTGMQPLV--------RAATFPVDAPVRQLDHVLAGPG 227 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 + +D SDH ++V Sbjct: 228 VHAAGPGDAVD------LGLSDHRALVVD 250 >gi|322503900|emb|CBZ38986.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 732 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 7/43 (16%) Query: 4 VTVATWNVNS-------IRARIHNLAAWIKENNPDIICLQETK 39 + + +WNV IR ++ + DIICLQE K Sbjct: 1 MFLISWNVAGWSSTSQAIRESFGSIHDFFACTEADIICLQECK 43 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 8/37 (21%), Positives = 17/37 (45%) Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 Y+ WD + +N+G R+D+I++ + Sbjct: 469 CPCPYTCWDQSRNRRLENEGTRLDYILVDSALLPAVV 505 >gi|146104810|ref|XP_001469917.1| endonuclease/exonuclease protein-like protein [Leishmania infantum] gi|134074287|emb|CAM73033.1| endonuclease/exonuclease protein-like protein [Leishmania infantum JPCM5] Length = 732 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 7/43 (16%) Query: 4 VTVATWNVNS-------IRARIHNLAAWIKENNPDIICLQETK 39 + + +WNV IR ++ + DIICLQE K Sbjct: 1 MFLISWNVAGWSSTSQAIRESFGSIHDFFACTEADIICLQECK 43 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 8/37 (21%), Positives = 17/37 (45%) Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 Y+ WD + +N+G R+D+I++ + Sbjct: 469 CPCPYTCWDQSRNRRLENEGTRLDYILVDSALLPAVV 505 >gi|255014700|ref|ZP_05286826.1| hypothetical protein B2_12389 [Bacteroides sp. 2_1_7] Length = 279 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 37/269 (13%), Positives = 71/269 (26%), Gaps = 22/269 (8%) Query: 4 VTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 + V ++N+ N + R A +K D+ QE N L Sbjct: 19 MNVMSYNIRYDNLGDKDNQWKFRRDFAADLVKFYEADVFGAQEVLNNQLNDLLNRLPEYA 78 Query: 55 YHIETCGQKSYNGVA--ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 Y G I + + + + + + + + Sbjct: 79 YVGVGREDGKTKGEYAPIFYRKDRFSVDKSGNFWLAEDINAIGKKGWDAACERVATWAIL 138 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 + + + + R L LE+ + + II P Sbjct: 139 KDKNTGKKFFFLNTHLDHMGKVARHEGASLVLEQAKKLSENLPIIVTGDFNAVPSDEPIQ 198 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 + A ++F D+ + K + ID+I + Sbjct: 199 VLTNPSDPR-------HLTHSRTIAGFTYGPKWTFHDFGKIPYDK-REW-IDYIFVKGNI 249 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + + T+ PSDH PVI +L Sbjct: 250 --KVLRHGVLTETLNNLFPSDHCPVISTL 276 >gi|156976926|ref|YP_001447832.1| hypothetical protein VIBHAR_05711 [Vibrio harveyi ATCC BAA-1116] gi|156528520|gb|ABU73605.1| hypothetical protein VIBHAR_05711 [Vibrio harveyi ATCC BAA-1116] Length = 287 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 38/290 (13%), Positives = 80/290 (27%), Gaps = 54/290 (18%) Query: 2 SVVTVATWNV-----NSIR-ARIHN----LAAWIKENNPDIICLQET-------KTEDKN 44 + V + +WN+ + + +R L ++ + DI+ QE K + Sbjct: 20 NSVNLTSWNIEWLSIDGGKVSRTPQDFEKLNHYVDKTQADILAFQEVENAAAVQKAVGND 79 Query: 45 F-----PFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDD--LDVQARFIEA 97 F + + Q + V + G+ + Sbjct: 80 FTIYLSDRSNASNRHLQFNDTNQYTGFAVRNGVSVLDKPDFSITRGNSKLRFASYLVLNP 139 Query: 98 TFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII 157 T L + G + + ++ R + ++ + GD+N Sbjct: 140 DQDNETHLLSVHLKAGCSGAYRNNRDCKIVKQQGQALAKWIKAREDNKQQYVVLGDFNHN 199 Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK 217 + + ++ + K H + Sbjct: 200 LGYRGDWLWEVLSDNT-----DAKLVTKNTKAECKVRSNRNPKKTHQF------------ 242 Query: 218 NKGIR--IDHIMLSPEATSLLHSARIDTKPRGWT----KPSDHTPVIVSL 261 R IDHI++S + + S+ + T + K SDH PV +L Sbjct: 243 ----RSVIDHIIVSGDLKA---SSGVQTVFKTQDVLDYKLSDHCPVSTTL 285 >gi|145224965|ref|YP_001135643.1| endonuclease/exonuclease/phosphatase [Mycobacterium gilvum PYR-GCK] gi|145217451|gb|ABP46855.1| Endonuclease/exonuclease/phosphatase [Mycobacterium gilvum PYR-GCK] Length = 269 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 34/276 (12%), Positives = 71/276 (25%), Gaps = 43/276 (15%) Query: 4 VTVATWNVNSIRAR-------IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56 + + T+N+ + R + + + DI+ LQE + L +L Sbjct: 7 MKLVTFNI--LHGRTPGAEVDLDRFVDCVAGLDADILALQEVDSIQARSGLADLTALAAE 64 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL-RIGNLYLPH 115 + + T + + + + + R+ + P Sbjct: 65 AMGARSHRFVAAIAGTPGATWMAATGEEQPGTAAYGVALLSRYPAVSWQVARLPRIPFPF 124 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + + + R L E + + +P + Y D Sbjct: 125 PLYLREPRKVVVVHEEPRAAVIGRFDTPLGELTVANTHLSFVPG-WNRYQLHHLMRDVRG 183 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDY-----YADSWSKNKGIR-IDHIMLS 229 L W A ++ ++ R +DH++ Sbjct: 184 LPSPWIVTGDLNMPAKPARR------------WSRLRCLASAPTFPADRPTRQLDHVLTD 231 Query: 230 PEATSLLHSARIDTKPRGWTKP----SDHTPVIVSL 261 A R + P SDH P++V L Sbjct: 232 EPAF----------TIRSYDTPEMAISDHRPLVVDL 257 >gi|170739956|ref|YP_001768611.1| endonuclease/exonuclease/phosphatase [Methylobacterium sp. 4-46] gi|168194230|gb|ACA16177.1| Endonuclease/exonuclease/phosphatase [Methylobacterium sp. 4-46] Length = 259 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 24/132 (18%), Positives = 47/132 (35%), Gaps = 11/132 (8%) Query: 5 TVATWNVNSIR---ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + +WN+ +R A + +AA I + PD++ +QE E P Y+ Sbjct: 25 KIISWNL--LRRTGATVEAVAALIAQEKPDLLLMQEATAEITALPERVG---GYYAWAPL 79 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 + +G+A+ S +P A ++ I N++L HG + Sbjct: 80 PRRIHGLAMWSPAPFPAPPRSIPI---PSGALVDRVAQVLDCGAFGIANVHLSHGQVLNR 136 Query: 122 TKYDDKISWIKR 133 + + Sbjct: 137 RQLRRIEQHLPA 148 >gi|289618020|emb|CBI55597.1| unnamed protein product [Sordaria macrospora] Length = 541 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 41/324 (12%), Positives = 80/324 (24%), Gaps = 69/324 (21%) Query: 6 VATWNVNSIR----ARIHNLAAW-----IKENNPDIICLQETKTEDKNFP--FETLQSLN 54 + T N ++ R L I + P I+ LQE + ET L Sbjct: 10 IVTLNCWGLKYISKLRRERLLEIGRQLAIADPQPQIVALQECFCHEDYLTIRRETRYILP 69 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT----------- 103 Y G+AILSK+ E + A + + Sbjct: 70 YGKFYFAGAFGGGLAILSKWPIEESTMFRYPLNGRPTAFWRGDWYVGKGIACAKIRYGSG 129 Query: 104 --QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFAS------------------QRLE 143 + + N + + K + + L Sbjct: 130 PKHIIEVFNTHTHAPYESGTPKDSYVCHRTAQSWEMSKLLRGAAERGHLVLGLGDFNMLP 189 Query: 144 LEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHH 203 + + + +P A E ++ + ++ + Sbjct: 190 MSLEHHIVTAHAPVHDVWRVLHPDSSVGPAHHPPE--KARNVPVPTAQENILKNCATSDG 247 Query: 204 LYSFWDYYAD----------------SWSKNKGIRIDHIML-SPEATSL-----LHSARI 241 ++ W + S +G R+D+I + + + + A + Sbjct: 248 PFNTWRWLPKHQKKLGIGKPVVTVDPSTPDLRGKRLDYIFAGTGDVAANGGGWVVKRAAV 307 Query: 242 ---DTKPRGWTKPSDHTPVIVSLD 262 P SDH V +L Sbjct: 308 GMMMRHPELGCSLSDHFAVEATLK 331 >gi|303282399|ref|XP_003060491.1| predicted protein [Micromonas pusilla CCMP1545] gi|226457962|gb|EEH55260.1| predicted protein [Micromonas pusilla CCMP1545] Length = 514 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 12/82 (14%), Positives = 22/82 (26%), Gaps = 15/82 (18%) Query: 196 RATHDTHHLYSFWDYYA---DSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP- 251 D +++ + K +G+R+D+ +S T Sbjct: 222 HLHGDARRACTWYGHPGVVATGRYKGRGMRLDYFFVSDGLERAAVECAQATDAYSDKPAA 281 Query: 252 -----------SDHTPVIVSLD 262 SDH V + L Sbjct: 282 LEQRPDDAFFGSDHCGVYLKLK 303 >gi|298375899|ref|ZP_06985855.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_19] gi|298266936|gb|EFI08593.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_19] Length = 287 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 38/269 (14%), Positives = 72/269 (26%), Gaps = 22/269 (8%) Query: 4 VTVATWNV---NS------IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 + V ++N+ NS + R A +K D+ QE N L Sbjct: 27 MNVMSYNIRYDNSGDKDNQWKFRRDFAADLVKFYEADVFGAQEVLNNQLNDLLNRLPEYA 86 Query: 55 YHIETCGQKSYNGVA--ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 Y G I + + + + + + + + Sbjct: 87 YVGVGREDGKTKGEYAPIFYRKDRFSVDKSGNFWLAEDINAIGKKGWDAACERVATWAIL 146 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 + + + + R L LE+ + + II P Sbjct: 147 KDKNTGKKFFFLNTHLDHMGKVARHEGASLVLEQAKKLSENLPIIVTGDFNAVPSDEPIQ 206 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 + A ++F D+ + K + ID+I + Sbjct: 207 VLTNPSDPR-------HLTHSRTIAGFIYGPEWTFHDFGKIPYDK-REW-IDYIFVKGNI 257 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + + T+ PSDH PVI +L Sbjct: 258 --KVLRHGVLTETLNNLFPSDHCPVISTL 284 >gi|261336140|dbj|BAI44772.1| pol-like protein [Alternaria alternata] Length = 1295 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 23/279 (8%), Positives = 70/279 (25%), Gaps = 27/279 (9%) Query: 2 SVVTVATWNVN-SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 + +++ +NV+ S + ++ + + DI+ +QE Sbjct: 5 NTLSILQYNVHKSRNMVMASMLRDPRIHEYDILAIQE----------------------- 41 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 ++ + + + G + ++ + + + Sbjct: 42 PWRNPFVATTHHPAKRVFHLCCPAGSEAGPARVCFFINKRLDHKKWQFKEHSRDICSLTV 101 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 D + + E D I + I+ + Sbjct: 102 EFGDDQQEEQNVIIHNVCNPARRSESDSTVLVDVRTILHDNQSSEQILLGDFDLHHPMWG 161 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + + + D + D + + + ID +++ + ++ Sbjct: 162 GTGVRHIDPKSADLLAIMEDFNLGSTLPPGTITYEERTSRTTIDLCLVTVGLVDRVVRSQ 221 Query: 241 IDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMK 279 +D SDH P+ +D+ + Sbjct: 222 VDRD---LDHDSDHLPISTVIDMRIQQLDATPKRDWKRL 257 >gi|225858569|ref|YP_002740079.1| metal-dependent hydrolase [Streptococcus pneumoniae 70585] gi|225721773|gb|ACO17627.1| metal-dependent hydrolase [Streptococcus pneumoniae 70585] Length = 271 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 30/272 (11%), Positives = 73/272 (26%), Gaps = 14/272 (5%) Query: 4 VTVATWNVNSI--RARIHNL---AAWIKENNPDIICLQETK-------TEDKNFPFETLQ 51 + T N +S + I E + D+IC QE E + Sbjct: 1 MKFLTLNTHSWMEKEAEEKFQILLEDILEKDYDLICFQEINQEMTSSEVEVNDLYQALPA 60 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 + H + + ++ K + G + + I + I + + + ++ Sbjct: 61 AEPIHQDHYVRLLVEKLSEQGKNYYWTWAYNHIGYNRYHEGVAILSKTPIEAREILVSDV 120 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 P + + K + ++ ++ + Sbjct: 121 DDPTDYHTRRVALAETVVDGKELAVASVHLSWWDKGFQEEWARFEAVLKKLNKPLLLAGD 180 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 + +G DA + Y+ + +RID++ + E Sbjct: 181 FNNPAGQEGYQAILASPLGLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTTKE 240 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + + + + SDH + L+ Sbjct: 241 LA--VENLHVVFDGNKSPQVSDHYGLNAILNW 270 >gi|120435157|ref|YP_860843.1| hypothetical protein GFO_0800 [Gramella forsetii KT0803] gi|117577307|emb|CAL65776.1| conserved hypothetical protein, membrane [Gramella forsetii KT0803] Length = 344 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 44/267 (16%), Positives = 76/267 (28%), Gaps = 38/267 (14%) Query: 6 VATWNVNSIRA-----RIH---NLAAWIKENNPDIICLQETKTEDKNFPFETLQS-LNYH 56 + ++NV A R + +IKENNPDI+C+QE L Y Sbjct: 103 LMSYNVRMFNAYEWSDRKDIPEKITGFIKENNPDILCVQE-----HYIGAAALSEVYPYE 157 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 K+ + + PI L T+R+ N++ Sbjct: 158 YIKLKGKNAEFGSAIFSKYPIINQASLDFPHDGNNNAIFTDLVIDKKDTVRVYNVHFQSL 217 Query: 117 NP-ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 N + S L+ E+ I D P + + Sbjct: 218 NIKPGIDDLQKEDSKKLLGRIGYGFSLQQEQAEILLADIKKSPYRTIIAGDFNNTSFSYI 277 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK-GIRIDHIMLSPEATS 234 ++Q + + S+ N +RID +++ Sbjct: 278 YDLIKQDDRFNDAFLEAG---------------SGFGKSFKLNYFPLRIDFLLIENNM-- 320 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261 ++ RI SDH PV+ + Sbjct: 321 KINEFRILD-----IDYSDHYPVLTKI 342 >gi|283853514|ref|ZP_06370755.1| Endonuclease/exonuclease/phosphatase [Desulfovibrio sp. FW1012B] gi|283571095|gb|EFC19114.1| Endonuclease/exonuclease/phosphatase [Desulfovibrio sp. FW1012B] Length = 251 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 28/67 (41%), Gaps = 9/67 (13%) Query: 2 SVVTVATWNVNSIRA---RIH--NLAAWIKENNPDIICLQET----KTEDKNFPFETLQS 52 +++ VAT+NV+ ++ R I+E D++ LQE E++ Sbjct: 7 ALLRVATYNVHGWKSLGGRRDIGRFVETIRELAADVVALQEVVMPPLIEEECLERAVAGP 66 Query: 53 LNYHIET 59 L H + Sbjct: 67 LGMHAVS 73 >gi|224025826|ref|ZP_03644192.1| hypothetical protein BACCOPRO_02568 [Bacteroides coprophilus DSM 18228] gi|224019062|gb|EEF77060.1| hypothetical protein BACCOPRO_02568 [Bacteroides coprophilus DSM 18228] Length = 311 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 45/293 (15%), Positives = 85/293 (29%), Gaps = 41/293 (13%) Query: 2 SVVTVATWNV------N--SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + V +WN+ N + + +K++ D+I + ET SL Sbjct: 28 NTLKVLSWNIWHEGHSNKYG-KQACDGVIGVLKKSEADVILMIETYGASDKVAD----SL 82 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 Y+ + + ++I S+Y ++ T + YL Sbjct: 83 GYY----HRLLSSNLSIYSRYPIVKTYTFPDQISTFNFGGVEILMHGKKVRIFDTWLHYL 138 Query: 114 PHGNPITSTKYDDKISWIKRFLRFA-----------SQRLELEEPLIFAGDYNIIPQPHD 162 P + + K + +I E + + G I D Sbjct: 139 PDARCVPTEKSEAEILAWDDAGTRDDEIRTIISILKPFIAESDSIPMIMGGDFNIHSHLD 198 Query: 163 CYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY--SFWDYYADSWSK-NK 219 + + + ++ GF D+ R + + W ADS N+ Sbjct: 199 WTEATKNLYNHGGAVVNWTVSKSMEEAGFIDSFREVNPDPVKNIGTTWLTAADSLETPNR 258 Query: 220 GIRIDHIMLSPEATSLLHSARIDTKPRGWT---------KPSDHTPVIVSLDI 263 RID+I T +++ G SDH V+ I Sbjct: 259 QDRIDYIYY-QGKTIKATASQCYDNYLGKQFQFEGEPFFYGSDHGFVLTEFSI 310 >gi|326332555|ref|ZP_08198824.1| endonuclease/exonuclease/phosphatase family protein [Nocardioidaceae bacterium Broad-1] gi|325949647|gb|EGD41718.1| endonuclease/exonuclease/phosphatase family protein [Nocardioidaceae bacterium Broad-1] Length = 271 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQET 38 + + + N AR +LAAW+ D++CLQE Sbjct: 1 MRIVSVNAWGG-ARYDDLAAWLPTAGADVVCLQEV 34 >gi|325964365|ref|YP_004242271.1| metal-dependent hydrolase [Arthrobacter phenanthrenivorans Sphe3] gi|323470452|gb|ADX74137.1| metal-dependent hydrolase [Arthrobacter phenanthrenivorans Sphe3] Length = 275 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 37/275 (13%), Positives = 68/275 (24%), Gaps = 34/275 (12%) Query: 2 SVVTVATWNVNS----IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ---SLN 54 + V + TWNV + R + A + + PDI+ L E+ T ++ L L Sbjct: 18 TTVRIVTWNVWGRYGPWQEREAAVIATLTDARPDIVVLTESWTTAEDSQCARLAGPLGLP 77 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 +H + + A+ R +AT + + Sbjct: 78 HHAFSGVPAQEDESALSGVAVLSRWPITAQAGMDFGALRVQQATIAGPRGPITVY----- 132 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 G + + D + + D ++ Sbjct: 133 -GGVMDAWWPDQGRQRQEAVRALLEHLKTSWDDRTPLVVCGDFNADPDSDEIRMFTGRVA 191 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM------- 227 + + + G + W W RID++ Sbjct: 192 APVPGLSFYDAWEAGGTERGCTWANTNP-----WATQLL-WPD---RRIDYVFTGMPRRG 242 Query: 228 -LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + L R P PSDH + L Sbjct: 243 GAGHPLAAELLGTR----PLHGMYPSDHLALQADL 273 >gi|218439253|ref|YP_002377582.1| endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 7424] gi|218171981|gb|ACK70714.1| Endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 7424] Length = 262 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 44/272 (16%), Positives = 75/272 (27%), Gaps = 28/272 (10%) Query: 3 VVTVATWNV----------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52 ++ + T+N+ N + R +A+ I +PD+I QE K L Sbjct: 2 LLKLITFNIRYDKPDPDDHN-WKVRRKAIASVITHYSPDLIGTQEGKAHQ-------LLD 53 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 L+ + + S + L+ F+ T I Sbjct: 54 LHRMLPHYQSVGGDRTGTRSNEHCSIFYHSQRLNCLETGDFFLSETPEIPGSITESWGNP 113 Query: 113 LPHGNPITSTK---YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 P + KI L + S++ + + + Sbjct: 114 HPRMVTWAIFQGLDEPKKIILFNTHLDYYSEKARELGAKLIYERLSQLDVTDTYLFVTAD 173 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 N T+ + L D A SF + ++ ID I Sbjct: 174 FNATPETVTRKTFETPLPEGRQLDDALAQLPLEDQKSFNHFTEEATDA-----IDTIYYD 228 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 L +A +D + PSDH PVI Sbjct: 229 SRV--KLQNAFVDRQKWEGVIPSDHFPVIGEF 258 >gi|150008872|ref|YP_001303615.1| hypothetical protein BDI_2262 [Parabacteroides distasonis ATCC 8503] gi|256841134|ref|ZP_05546641.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|149937296|gb|ABR43993.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503] gi|256736977|gb|EEU50304.1| conserved hypothetical protein [Parabacteroides sp. D13] Length = 287 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 38/269 (14%), Positives = 72/269 (26%), Gaps = 22/269 (8%) Query: 4 VTVATWNV---NS------IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 + V ++N+ NS + R A +K D+ QE N L Sbjct: 27 MNVMSYNIRYDNSGDKDNQWKFRRDFAADLVKFYEADVFGAQEVLNNQLNDLLNRLPEYA 86 Query: 55 YHIETCGQKSYNGVA--ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 Y G I + + + + + + + + Sbjct: 87 YVGVGREDGKTKGEYAPIFYRKDRFSVEKSGNFWLAEDINAIGKKGWDAACERVATWAIL 146 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 + + + + R L LE+ + + II P Sbjct: 147 KDKNTGKKFFFLNTHLDHMGKVARHEGASLVLEQAKKLSENLPIIVTGDFNAVPSDEPIQ 206 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 + A ++F D+ + K + ID+I + Sbjct: 207 VLTNPSDPR-------HLTHSRTIAGFIYGPEWTFHDFGKIPYDK-REW-IDYIFVKGNI 257 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + + T+ PSDH PVI +L Sbjct: 258 --KVLRHGVLTETLNNLFPSDHCPVISTL 284 >gi|50736245|ref|XP_419093.1| PREDICTED: similar to RP1-30M3.3 [Gallus gallus] Length = 369 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 9/44 (20%) Query: 2 SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQET 38 S ++ TWN++ + RAR + +++ +PD++ LQE Sbjct: 119 SSFSLITWNIDGLDLGNLQERAR--GVCSYLALYSPDVVFLQEV 160 >gi|167950579|ref|ZP_02537653.1| endonuclease/exonuclease/phosphatase family protein [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 62 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 12/64 (18%), Positives = 27/64 (42%), Gaps = 14/64 (21%) Query: 202 HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +L++F + +DHI+ SP + + SDH P+++ + Sbjct: 5 CNLHTFPSWRPKRK-------LDHILASPSL--RVARTEVLHYT-----HSDHLPIMLEI 50 Query: 262 DIPE 265 ++P+ Sbjct: 51 ELPD 54 >gi|149923487|ref|ZP_01911890.1| hypothetical protein PPSIR1_41059 [Plesiocystis pacifica SIR-1] gi|149815678|gb|EDM75207.1| hypothetical protein PPSIR1_41059 [Plesiocystis pacifica SIR-1] Length = 343 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 35/294 (11%), Positives = 67/294 (22%), Gaps = 37/294 (12%) Query: 4 VTVATWNVNSIRAR-----IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL--NYH 56 + V +WN+ + R + L I+ +PDI+ +QE K E L +L + Sbjct: 61 LRVVSWNLENFRGDPEDHDLERLRQTIEAVDPDILAVQEIK------DPEALAALLPGWG 114 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 I + ++ + + + R Sbjct: 115 IALSKGGGRGHQKLGVAWRRDRVELVGQPVEHRELTLSGRVRPA-FSAYFRDAARSSASE 173 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + + + + + + H Sbjct: 174 ASPPLDLWVTVVHLKAMPTGHEDRTTQWPALVEAVRGLSKRDPDHVVLGDFNSTGAPGEG 233 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 + + Y + D+W + ID + + L Sbjct: 234 TATEHAELDAALRPADLRRLPNSEGCSAY-YDGARRDAWK--EASEIDLVWV-RGLEGAL 289 Query: 237 -----------HSARIDTKPRGWT--------KPSDHTPVIVSLDIPEPRKKQQ 271 +A R SDH PVI+ L EP Sbjct: 290 GADPAVHSGTHCAAHHCRDFRSTEAYPEPDYSFLSDHCPVILDLRRGEPDGPAD 343 >gi|148989840|ref|ZP_01821134.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pneumoniae SP6-BS73] gi|148992423|ref|ZP_01822118.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pneumoniae SP9-BS68] gi|168488429|ref|ZP_02712628.1| metal-dependent hydrolase [Streptococcus pneumoniae SP195] gi|168492909|ref|ZP_02717052.1| metal-dependent hydrolase [Streptococcus pneumoniae CDC3059-06] gi|221231555|ref|YP_002510707.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pneumoniae ATCC 700669] gi|225854267|ref|YP_002735779.1| metal-dependent hydrolase [Streptococcus pneumoniae JJA] gi|237650468|ref|ZP_04524720.1| metal-dependent hydrolase [Streptococcus pneumoniae CCRI 1974] gi|237821902|ref|ZP_04597747.1| metal-dependent hydrolase [Streptococcus pneumoniae CCRI 1974M2] gi|147924782|gb|EDK75866.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pneumoniae SP6-BS73] gi|147928740|gb|EDK79753.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pneumoniae SP9-BS68] gi|183572906|gb|EDT93434.1| metal-dependent hydrolase [Streptococcus pneumoniae SP195] gi|183576858|gb|EDT97386.1| metal-dependent hydrolase [Streptococcus pneumoniae CDC3059-06] gi|220674015|emb|CAR68528.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pneumoniae ATCC 700669] gi|225723039|gb|ACO18892.1| metal-dependent hydrolase [Streptococcus pneumoniae JJA] gi|332073115|gb|EGI83594.1| endonuclease/Exonuclease/phosphatase family protein [Streptococcus pneumoniae GA17570] Length = 271 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 31/272 (11%), Positives = 72/272 (26%), Gaps = 14/272 (5%) Query: 4 VTVATWNVNSI--RARIHNL---AAWIKENNPDIICLQETK-------TEDKNFPFETLQ 51 + T N +S + I E + D+IC QE E + Sbjct: 1 MKFLTLNTHSWMEKEAEEKFQILLEDILEKDYDLICFQEINQEMTSSEVEVNDLYQALPA 60 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 + H + + + K + G D + I + I + + + ++ Sbjct: 61 AEPIHQDHYVRLLVEKLLEQGKNYYWTWAYNHIGYDRYHEGVAILSKTPIEAREILVSDV 120 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 P + + K + ++ ++ + Sbjct: 121 DDPTDYHTRRVALAETVVDGKELAVASVHLSWWDKGFQEEWARFEAVLKKLNKPLLLAGD 180 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 + +G DA + Y+ + +RID++ + E Sbjct: 181 FNNPAGQEGYQAILASPLGLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTTKE 240 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + + + + SDH + L+ Sbjct: 241 LA--VENLHVVFDGNKSPQVSDHYGLNAILNW 270 >gi|149187906|ref|ZP_01866202.1| putative phospholipase C precursor [Vibrio shilonii AK1] gi|148838302|gb|EDL55243.1| putative phospholipase C precursor [Vibrio shilonii AK1] Length = 442 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 39/283 (13%), Positives = 81/283 (28%), Gaps = 43/283 (15%) Query: 4 VTVATWNVNSIRA-------RIHNLAAWIKENNPDIICLQETKTE-DKNFPFETLQSLNY 55 + + T+N+ ++ A R + ++K D++ LQE F E + Y Sbjct: 178 LKLMTYNIWALPAIASHIGDRYELIPEYVK--GYDVLALQEVFASGRDAFLRELAKEYPY 235 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + ++ N + + + I H Sbjct: 236 QTKMLDKEGINIYDGGVIIVSRYPIVNEAQYVFPDCSGTDCFADKGVNYAEVIKGGQAYH 295 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + +D + R + ++ A +I Y+ N F Sbjct: 296 VFATHTASFDTDTARDYRQ-------RQFKQIRALAQSLDIPANEAVIYSGDFNVNKLKF 348 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYS--FWDYYADSWS-------KNKGIRIDHI 226 + + + + Y+ +D + ++ N +D++ Sbjct: 349 PDDY---------QQMMTNLNVSEPQYSGYTASTFDPRINDFAGGALSGGANVEY-LDYV 398 Query: 227 MLSPEA-TSLLHSARID----TKPRGWTK--PSDHTPVIVSLD 262 M+S E T + R+D T W SDH PV + Sbjct: 399 MVSNEYGTKSYNDNRVDVPRTTDESLWKHYNLSDHFPVTAVIK 441 >gi|315922569|ref|ZP_07918809.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313696444|gb|EFS33279.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 314 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 42/269 (15%), Positives = 81/269 (30%), Gaps = 26/269 (9%) Query: 4 VTVATWNV-----N-----SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + V ++N+ N S AR I+E P +I +QE + + E + Sbjct: 59 IKVMSFNIRYYNTNDTGDKSWDARTAAFIPMIEEQKPTVIGMQEARPPQLKWLEENWKDY 118 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 Y + + N + + + V + D + T+ Sbjct: 119 GYIGKGRRANNANNDEFVPIFYRKKAVELVKWDCFWLSETPDVPGSQGWDNTV-PRVATW 177 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 I S K I+ + +E + + N P + D+ Sbjct: 178 AIFKHIASGKKFFFINTHIDVGSTIAPGKSMEVIVNKMSELNPEGLPMLLTADFNKQIDS 237 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 V+ + D+ + Y+ + A+ + +DHI + Sbjct: 238 DIFNGVKTFMTNV------RLSAPVTDSKYSYTGFGT-ANPYI------VDHIFCTG--F 282 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 L ID + T SDH P++ L+ Sbjct: 283 KALKFETIDKVYQNITYISDHYPIVGKLE 311 >gi|224012699|ref|XP_002295002.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220969441|gb|EED87782.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 400 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 32/285 (11%), Positives = 70/285 (24%), Gaps = 40/285 (14%) Query: 3 VVTVATWNVNSIRARIHNL-----AAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57 ++ VA N+N I+E DII + E ++ + ++ Q Sbjct: 54 ILRVAINNINGTTFHQKGFEVAHEIQTIQELGIDIIAMCE---SNRAWTYKNKQEYERQT 110 Query: 58 ETCGQKSYNGVAIL-------------------SKYQPIEIVTHLPGDDLDVQARFIEAT 98 + A + + T+ ++ R Sbjct: 111 HLLWHNTRTVFASCPTGAEGYQPGGNVLNINGPAAGRVKATGTNKWERFCWMELRGQRDE 170 Query: 99 FTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP 158 + R+ +T+ R ++ L++ L Sbjct: 171 GWVIISAYRVCQEESHRPGALTAYMQQYTAMLSAGITRPNPRQQILDDLLHLITSKREQG 230 Query: 159 QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN 218 + + + + + Y+ +S Sbjct: 231 FRPILLMDANEDWVTNSHGKNQLADFMAAANLQDAFYERHQQSPPTYT----RGNS---- 282 Query: 219 KGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 R+D+I++ P A+ + G SDH V D+ Sbjct: 283 ---RLDYILVDPVASPCIRRVGYLGTHEGN--FSDHCLEYVDFDM 322 >gi|167523032|ref|XP_001745853.1| hypothetical protein [Monosiga brevicollis MX1] gi|163775654|gb|EDQ89277.1| predicted protein [Monosiga brevicollis MX1] Length = 513 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 41/288 (14%), Positives = 75/288 (26%), Gaps = 43/288 (14%) Query: 17 RIHNLAAWIKENNPDIICLQET-----------KTEDKNFP-------------FETLQS 52 R + I + + DIICLQE K ++++ Q+ Sbjct: 223 RKQQILKDILQYSSDIICLQEVASGQFYSYFQHKLRERDYQGLYHPKSRVRTMSDADRQT 282 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN--------TQ 104 ++ + V + G + I+ + + Sbjct: 283 VDGCAIFFHVSKFKLVKEHCIEFERSATRYASGCADMLNRVMIKDNIALCALLERQSTGE 342 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 + NL+L K + ++ F + P++ GD+N + Y Sbjct: 343 KFFVCNLHLTWDPKFRDVKVIQTVLALREIENFLKEHNCPNIPVMIMGDFNSMH-DSGVY 401 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRID 224 + L + + Y Y++ GI ID Sbjct: 402 ELMENGKYCVQPLMGEDWGYDYSKFIESVGLHHNLKLRSAYGNELPYSNYTPTFVGI-ID 460 Query: 225 HIMLS------PEATSLLHSARIDTKPRGWTKP---SDHTPVIVSLDI 263 +I S + A I G P SDH + I Sbjct: 461 YIWYSAERLIPSALLGPVEEAYIQEHVDGCPNPHFASDHLALSAEFRI 508 >gi|119485593|ref|ZP_01619868.1| hypothetical protein L8106_24460 [Lyngbya sp. PCC 8106] gi|119456918|gb|EAW38045.1| hypothetical protein L8106_24460 [Lyngbya sp. PCC 8106] Length = 258 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 37/268 (13%), Positives = 78/268 (29%), Gaps = 20/268 (7%) Query: 4 VTVATWNVN------SIRA---RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 + + T+NV A R +A + E + D++ QE K + + L+ Sbjct: 1 MKIVTFNVRFDKPDPGNNAWVWRRQVMAQLMAEWDADLVGTQEGKAHQ---LLDLHRRLS 57 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 + + NG++ + ++ + ++ + + Sbjct: 58 NYQTVGVDRQGNGLSEYCAIFYHQQRWRCLKTGDFWLSKTPKLVGSVTAEWENPVPRMVS 117 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 G D I + SQR + + + + N Sbjct: 118 WGVFEGVG-QDKPIIIFNTHFDYHSQRARELSAQLISDRLSQFNADEYLFIVTGDFNAEP 176 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 + + + L N A D ++ ++ ++ +D I Sbjct: 177 DSFTRKTLLKPLTNGVVLCDTLADIDLDEQMTYHEFTGKGFAA-----VDTIYYDSRL-- 229 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 LH +D + PSDH PVI + Sbjct: 230 NLHQVSVDRTQIDYVWPSDHFPVIAQFN 257 >gi|9885288|gb|AAG01389.1|AF199494_1 nocturnin [Homo sapiens] Length = 278 Score = 47.1 bits (110), Expect = 0.003, Method: Composition-based stats. Identities = 37/263 (14%), Positives = 65/263 (24%), Gaps = 28/263 (10%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFE--TLQSLNYHIETCGQKSYNGVAILSKYQPIE 78 + I PDI+CLQE D F L L Y + S +E Sbjct: 26 ILEEILAYQPDILCLQEV---DHYFDTFQPLLSRLGYQGTFFPKP-------WSPCLDVE 75 Query: 79 IVTHLPGD--DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 G + + I + + + + + + L+ Sbjct: 76 HNNGPDGCALFFLQNRFKLVNSANIRLTAMTLKTNQVTIAQTLECKESGRQFCIAVTHLK 135 Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN----MGFT 192 + N+ P+I D + Sbjct: 136 ARTGWERFRSAQGCDLLQNLQNITQGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAY 195 Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP------EATSLLHSARIDTKPR 246 + A + Y+ W ++ +D+I S A LL +I Sbjct: 196 KLLSADGQSEPPYTTWKIRTSGECRHT---LDYIWYSKHALNVRSALDLLTEEQIGPNRL 252 Query: 247 -GWTKPSDHTPVIVSLDIPEPRK 268 + PSDH ++ E Sbjct: 253 PSFNYPSDHLSLVCDFSFTEESD 275 >gi|330720429|gb|EGG98744.1| Endonuclease/exonuclease/phosphatase family protein [gamma proteobacterium IMCC2047] Length = 242 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 11/49 (22%) Query: 221 IR----IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 R +DHI++SP+ + A + SDH P+ V +++P Sbjct: 195 WRPVSNLDHILVSPDL--RVKWAEVVPYAL-----SDHLPLAVEIEMPS 236 >gi|260174301|ref|ZP_05760713.1| hypothetical protein BacD2_20756 [Bacteroides sp. D2] Length = 304 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 42/269 (15%), Positives = 81/269 (30%), Gaps = 26/269 (9%) Query: 4 VTVATWNV-----N-----SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + V ++N+ N S AR I+E P +I +QE + + E + Sbjct: 49 IKVMSFNIRYYNTNDTGDKSWDARTAAFIPMIEEQKPTVIGMQEARPPQLKWLEENWKDY 108 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 Y + + N + + + V + D + T+ Sbjct: 109 GYIGKGRRANNANNDEFVPIFYRKKAVELVKWDCFWLSETPDVPGSQGWDNTV-PRVATW 167 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 I S K I+ + +E + + N P + D+ Sbjct: 168 AIFKHIASGKKFFFINTHIDVGSTIAPGKSMEVIVNKMSELNPEGLPMLLTADFNKQIDS 227 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 V+ + D+ + Y+ + A+ + +DHI + Sbjct: 228 DIFNGVKTFMTNV------RLSAPVTDSKYSYTGFGT-ANPYI------VDHIFCTG--F 272 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 L ID + T SDH P++ L+ Sbjct: 273 KALKFETIDKVYQNITYISDHYPIVGKLE 301 >gi|222637558|gb|EEE67690.1| hypothetical protein OsJ_25350 [Oryza sativa Japonica Group] Length = 486 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 39/307 (12%), Positives = 86/307 (28%), Gaps = 53/307 (17%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDK---NFPFETLQSLNY-HIETCGQKSYNGVAILS 72 R ++ ++E DII LQ + E++ + E + L ++ G A+LS Sbjct: 172 RRRSVEEVLREVGADIIGLQNVRAEEERGMSPLSELAEGLGMRYVFAESWAPEYGNAVLS 231 Query: 73 KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIK 132 ++ I D + + R+ + + N K Sbjct: 232 RWP---IKRWKSQRVADQSDFRCSKVRYVRAKNFRVESKHGLILNVDNHLSDRSKKCLYF 288 Query: 133 RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL------ 186 +E+ +++ H + + + +A Sbjct: 289 EMKNVLRATIEVPRAGEV--NFHCTHLDHLDESWRMKQMNAILRSSDGPHILTGGLNALD 346 Query: 187 ---QNMGFTDAIRATHDTHHLYS-------------FWDYYADSWSK------------- 217 + I ++ + + D A ++ Sbjct: 347 GTDYSDERWADIVKYYEEIGKPTPKAEVMKYLKGKQYVD--AKDFAGECEAVVVVAKGQD 404 Query: 218 -----NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQD 272 G R+D+I+ SP + SDH V V + I + ++ ++ Sbjct: 405 VQGTCKYGTRVDYILASPNSPYKFVPGS--YTVISSKGTSDHHIVKVDVTIQDKKETDEE 462 Query: 273 STSQNMK 279 S +Q + Sbjct: 463 SGNQRQR 469 >gi|55822181|ref|YP_140622.1| hypothetical protein str0193 [Streptococcus thermophilus CNRZ1066] gi|55738166|gb|AAV61807.1| conserved hypothetical protein [Streptococcus thermophilus CNRZ1066] Length = 290 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 29/269 (10%), Positives = 69/269 (25%), Gaps = 20/269 (7%) Query: 2 SVVTVATWNVNS-IRARIHNLAAWIKEN----NPDIICLQETKTEDKNFPFETLQ-SLNY 55 ++ T N +S I +KE DIIC QE ++ ++ Y Sbjct: 19 KIMKFLTLNTHSWIEEDAEGKFQTLKEQILKAQYDIICFQEV---NQEIETAAVETDAYY 75 Query: 56 HIETCGQKSYNGVAIL---------SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 H+ + + + G D + + + + + Sbjct: 76 HVLPSATSIHQDHFVRLLVEKLAEEGLQYHWTWAYNHIGYDHLNEGVAVLSRQPLTASEI 135 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 + ++ P + + + ++ Sbjct: 136 LVSDVDDPTDYHTRRVAVAETTVDGREVAVASIHLSWWDKGFQEEWARIEERFQSIGKPL 195 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226 I+ + + D+ + T+ Y+ + +RID++ Sbjct: 196 ILAGDFNNPAGREGYQTILASPLKLQDSFQVAQKTNGSYTVGPGIDGWKGNEEPLRIDYV 255 Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHT 255 S E ++ + + SDH Sbjct: 256 FASQEWA--VNRLSVIFDGNNQSLVSDHY 282 >gi|28897872|ref|NP_797477.1| putative phospholipase C [Vibrio parahaemolyticus RIMD 2210633] gi|260361802|ref|ZP_05774827.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus K5030] gi|260877031|ref|ZP_05889386.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus AN-5034] gi|28806085|dbj|BAC59361.1| putative phospholipase C precursor [Vibrio parahaemolyticus RIMD 2210633] gi|308093920|gb|EFO43615.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus AN-5034] gi|308113224|gb|EFO50764.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus K5030] Length = 442 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 40/283 (14%), Positives = 80/283 (28%), Gaps = 43/283 (15%) Query: 4 VTVATWNVNSIRA-------RIHNLAAWIKENNPDIICLQETKTE-DKNFPFETLQSLNY 55 + + T+N+ ++ A R + ++K D++ QE F E + Y Sbjct: 178 LKLMTYNIWALPAIASHIGDRYELIPDYVK--GYDVLAFQEVFASGRDAFLRELAKEYPY 235 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + + +N + + + I H Sbjct: 236 QTKMLDKDGFNVYDGGVIIVSRYPIVNEAQYVFPDCSGTDCFADKGVNYAEIIKGGQAYH 295 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + +D + R +F R A NI Y+ N Sbjct: 296 VFATHTASFDTDTAREYRQRQFQQMR-------TMAQSLNIPNNETVVYSGDFNVNK--- 345 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYS--FWDYYADSWS-------KNKGIRIDHI 226 + A + Y+ +D ++++ +N +D++ Sbjct: 346 ------LKFPGDYQQMIANLSAMEPQYSGYTASTFDPRINNFAGEALSGGENVEY-LDYV 398 Query: 227 MLSPEA-TSLLHSARID---TKPRGWTKP---SDHTPVIVSLD 262 M+S E + R+D + G K SDH PV + Sbjct: 399 MVSNEYGVKSFNDNRVDVPRSTAEGLWKHYNLSDHFPVSAVIK 441 >gi|311262545|ref|XP_003129235.1| PREDICTED: nocturnin-like [Sus scrofa] Length = 427 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 37/256 (14%), Positives = 64/256 (25%), Gaps = 28/256 (10%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFP--FETLQSLNYHIETCGQKSYNGVAILSKYQPIE 78 + I PDI+CLQE D F L L Y + S +E Sbjct: 179 ILEEILAYQPDILCLQEV---DHYFDTFHPLLSRLGYQGTFFPKP-------WSPCLDVE 228 Query: 79 IVTHLPGD--DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 G + + I + + + + + L+ Sbjct: 229 HNNGPDGCALFFLQNRFKLVNSANIRLTAMTLKTNQVAIAQTLECRASRRQFCIAVTHLK 288 Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV----RQSFQKLQNMGFT 192 + N+ P+I D + L Sbjct: 289 ARTGWERFRSAQGCDLLQNLQNITQGAKIPLIICGDFNAEPTEEVYKHFASSSLNLSSAY 348 Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS------PEATSLLHSARIDTKPR 246 + A + Y+ W ++ +D+I S A LL +I Sbjct: 349 KLLSADGQSEPPYTTWKIRTSGECRHT---LDYIWYSRQALSVRSALDLLTEEQIGPNRL 405 Query: 247 -GWTKPSDHTPVIVSL 261 + PSDH ++ Sbjct: 406 PSFNYPSDHLSLVCDF 421 >gi|307705238|ref|ZP_07642105.1| endonuclease/Exonuclease/phosphatase family protein [Streptococcus mitis SK597] gi|307621187|gb|EFO00257.1| endonuclease/Exonuclease/phosphatase family protein [Streptococcus mitis SK597] Length = 271 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 33/273 (12%), Positives = 78/273 (28%), Gaps = 16/273 (5%) Query: 4 VTVATWNVNSI--RARIHNL---AAWIKENNPDIICLQETK-------TEDKNFPFETLQ 51 + T N +S + I E + D+IC QE E + Sbjct: 1 MKFLTLNTHSWMEKEAEEKFQILLEDILEKDYDLICFQEINQEITSPEVEVNDLYKSLPA 60 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 + H + + ++ K + G D + I + I + + + ++ Sbjct: 61 AEPIHQDHYVRLLVEKLSEQGKNYYWTWAYNHIGYDRYHEGVAILSKTPIEAREILVSDV 120 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG-DYNIIPQPHDCYNPIIWE 170 P + K + ++ + + + + + + Sbjct: 121 DDPTDYHTRRVALAETAVDGKELAVASVHLSWWDKGFQEEWARFEAVLKELNKPLLLAGD 180 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230 + E Q+ +G DA + Y+ + +RID++ + Sbjct: 181 FNNPAGQEGYQAILASP-LGLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTTK 239 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 E + + + + SDH + L+ Sbjct: 240 ELA--VENLHVVFDGNKSPQVSDHYGLNAILNW 270 >gi|126179386|ref|YP_001047351.1| endonuclease/exonuclease/phosphatase [Methanoculleus marisnigri JR1] gi|125862180|gb|ABN57369.1| Endonuclease/exonuclease/phosphatase [Methanoculleus marisnigri JR1] Length = 328 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 26/57 (45%), Gaps = 9/57 (15%) Query: 4 VTVATWNVN----SIRARIHNLAAWIKENNPDIICLQETKTEDKNFP--FETLQSLN 54 + + +WN++ +++ + A ++PDI+ QE D+ P E L+ Sbjct: 7 MRLISWNIDLFRSGLKSVEKKVEAVC-RHSPDIVAFQEV--TDRALPLFREELEKFG 60 Score = 45.2 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 21/66 (31%), Gaps = 6/66 (9%) Query: 198 THDTHHLYSFWDYYAD-SWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTP 256 YS+ K K R DHI S + RG SDH+ Sbjct: 267 HGYQAREYSWCPDRGPEDVPKCK--RYDHIFASTRLNP--TACWYLHDLRG-QGLSDHSA 321 Query: 257 VIVSLD 262 V++ + Sbjct: 322 VVMDFE 327 >gi|326664792|ref|XP_003197888.1| PREDICTED: transposon TX1 uncharacterized 149 kDa protein-like [Danio rerio] Length = 1140 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 40/265 (15%), Positives = 81/265 (30%), Gaps = 35/265 (13%) Query: 4 VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 +T +T NV S+++ R ++ + +K D+ LQE PF NY Sbjct: 3 ITFSTINVRSVKSLVRAQSIFSLLKTFKTDVFLLQEC-----ALPFLK----NYKKWEDL 53 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 + S + + + + +T + + + L + + Sbjct: 54 WTPGPSIWSGSNFNKND---GVAILINNPNILVKGSTVVRDGRAILANLTVLDRDFNVLN 110 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + L + P I AGD+N + D +D Sbjct: 111 FYGFTDKNKRFELLEDIQPHMLGRVPFILAGDFNCVLTQKDRRRA----DDFKVDKTSVL 166 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS--PEATSLLHSA 239 +++ D +A H ++++ + RID++ P + L Sbjct: 167 LQGLVRDFKLVDCFKAMHQREEGFTWFSGDGT-----RASRIDYMFTRDYPPTDAKLT-- 219 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIP 264 SDH + +L +P Sbjct: 220 --------PLFFSDHLMLSCTLSLP 236 >gi|325189143|emb|CCA23668.1| conserved hypothetical protein [Albugo laibachii Nc14] gi|325190841|emb|CCA25329.1| conserved hypothetical protein [Albugo laibachii Nc14] Length = 423 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 46/273 (16%), Positives = 79/273 (28%), Gaps = 37/273 (13%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQP 76 R ++ I E P I+ E L+ + + K Sbjct: 152 RKAHVLDIINEYKPTILG-----------TREGLE-------SQLVDIATNLTDSYKRFG 193 Query: 77 IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 IE + F + N L +++ T ++ + + + + Sbjct: 194 IERDQGSNFWLSENPLDFGTIGWNANCVRLVTWCIFILFETQQTFYVFNTQFDQVGKVSQ 253 Query: 137 FASQRLELEEPLIFAGD--YNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDA 194 + S RL AG + Y E + N Sbjct: 254 YQSARLLWHRIESIAGTNAIVFTLGDFNVYRDDAIYTYLTKYEEGPKFHDAWANAASK-- 311 Query: 195 IRATHDTHHLYSFWDYYADSW----SKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWT 249 D Y++ + ++ K +G+ ID I+ P + ++ T+ R Sbjct: 312 -----DGGVSYTYHAWQGPAYHLEKDKVEGLYHIDWILSRPYV--KVLETKVITECRNGL 364 Query: 250 KPSDHTPVIVSLDIPE---PRKKQQDSTSQNMK 279 PSDH PV L +P R Q DST K Sbjct: 365 YPSDHYPVQTKLVLPASTVKRSSQSDSTGSEKK 397 >gi|323705197|ref|ZP_08116773.1| Endonuclease/exonuclease/phosphatase [Thermoanaerobacterium xylanolyticum LX-11] gi|323535623|gb|EGB25398.1| Endonuclease/exonuclease/phosphatase [Thermoanaerobacterium xylanolyticum LX-11] Length = 231 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 40/265 (15%), Positives = 80/265 (30%), Gaps = 45/265 (16%) Query: 3 VVTVATWNVNS---I--RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57 ++ V T+N++ I ++ ++ I+E DI+ LQE + +Y + Sbjct: 2 IIKVMTYNIHGGKDIEGNLTLYGISNLIREIGVDIVGLQEV---------DVFLKRSYFL 52 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 + + + I G+ + +R+ + + + Sbjct: 53 NEIKYLAKRLKMHYAFGPNLRIGFGSFGNG--ILSRYPIVKKKNHHIYSKGERRGVLTAL 110 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + L + ++ +E L + +N E + Sbjct: 111 IQLNENKKIWFLTTHLGLNRKERLVQSQEILKIVSNLEYPVIMTGDFNETPGEEAYSTII 170 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 V + QN F + + RID+IM S + Sbjct: 171 RVLKDAVNTQNSAFHTYVDGCENV--------------------RIDYIMHSKGM--RVE 208 Query: 238 SAR-IDTKPRGWTKPSDHTPVIVSL 261 S + ID+ SDH PV+ SL Sbjct: 209 SIKAIDS------TLSDHLPVVASL 227 >gi|315612842|ref|ZP_07887753.1| RgfB protein [Streptococcus sanguinis ATCC 49296] gi|315314952|gb|EFU62993.1| RgfB protein [Streptococcus sanguinis ATCC 49296] Length = 271 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 33/267 (12%), Positives = 81/267 (30%), Gaps = 20/267 (7%) Query: 4 VTVATWNVNSI--RARIHNLAAWIKEN---NPDIICLQETKTEDKNFPFETLQSLNY--- 55 + T N +S + +++ + D+IC QE + E + +Y Sbjct: 1 MKFLTLNTHSWMEKEAEEKFQILLQDILDKDYDLICFQEI--NQEMTSPEVEANNHYQAL 58 Query: 56 ------HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 H + + +A K + G D + I + I + + + Sbjct: 59 PSAEPIHQDHYVRLLVEKLAEKGKNYYWTWAYNHIGYDRYHEGVAILSKTPIKAREILVS 118 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG-DYNIIPQPHDCYNPII 168 ++ P + K + ++ + ++ + + + Sbjct: 119 DVDDPTDYHTRRVALAETEVEGKELALASVHLSWWDKGFQEEWARFEVVLKDLNKPLILA 178 Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 + + E Q+ +G DA + Y+ + +RID++ Sbjct: 179 GDFNNPAGQEGYQAIL-ASQLGLQDAFEVAKERSGSYTVPPEIDGWKGNTEPLRIDYVFT 237 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHT 255 + E + S ++ + + SDH Sbjct: 238 TKELE--VESLQVVFDGQNSPQVSDHY 262 >gi|308463548|ref|XP_003094047.1| hypothetical protein CRE_17519 [Caenorhabditis remanei] gi|308248613|gb|EFO92565.1| hypothetical protein CRE_17519 [Caenorhabditis remanei] Length = 968 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 43/280 (15%), Positives = 89/280 (31%), Gaps = 25/280 (8%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENN---PDIICLQETKTEDKNFPFETLQSLNYHIETC 60 + + T+N S+ A + LA ++E N DII L ETK + Sbjct: 21 LRICTFNCRSV-ATDNRLAELLEETNRIKYDIIGLSETKRSAE-VHMTNRDGTG---VIL 75 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 G+++ + V+ + + + + V R T +N I Y P + Sbjct: 76 GKRNDSSVSGGVGFIINKSLMPKIKEIKIVNHRIGYLTLQVNKNQYTIIQGYAPTADYEE 135 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + + + S+ + + + + ND+ L Sbjct: 136 EDHSNFYENLEDVYKSCKSRYKMVIGDFNARIGERKGNEVFIGPHSMENRNDSGERL--- 192 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + N F + TH +++ + +DHI+ + + Sbjct: 193 -ATFCEVNRVFHMNSQFIKPTHRRWTYISPDKQHRHE-----LDHILANG---KYITDVS 243 Query: 241 IDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 + +T SDH + ++ I + K + + KP Sbjct: 244 V---VPSFTNGSDHRMLRANVHINAKQAKFEQV--KRRKP 278 >gi|281354416|gb|EFB30000.1| hypothetical protein PANDA_019779 [Ailuropoda melanoleuca] Length = 128 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 38/110 (34%), Gaps = 12/110 (10%) Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 E L + TD RA H Y+F+ ++S RIDHI+ Sbjct: 16 KQTINKETMALNDSLDWINLTDLFRAFHPKAAEYTFFSSIHGTFS-----RIDHILGHKS 70 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 A + I SDH + L++ + + S + +K I Sbjct: 71 ALNKYKKTEIIACI-----FSDHN--TMKLEVNSRKNCGKTSNTWKLKNI 113 >gi|254506370|ref|ZP_05118513.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus 16] gi|219550850|gb|EED27832.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus 16] Length = 442 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 39/283 (13%), Positives = 80/283 (28%), Gaps = 43/283 (15%) Query: 4 VTVATWNVNSIRA-------RIHNLAAWIKENNPDIICLQETKTE-DKNFPFETLQSLNY 55 + + T+N+ ++ A R + ++K D++ LQE F E + Y Sbjct: 178 LKLMTYNIWALPAIASHIGDRYELIPDYVK--GYDVLALQEVFASGRDAFLRELAKEYPY 235 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + + +N + + + I H Sbjct: 236 QTKMLDKDGFNIHDGGVVIVSRYPIVNQAQYVFPDCSGTDCFADKGVNYAEIIKGGQAYH 295 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + +D + R + ++ A NI Y+ N Sbjct: 296 VFATHTASFDTDTAREYRQ-------RQFKQMRAMAKSLNIPNGETVVYSGDFNVNK--- 345 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYS--FWDYYADSWS-------KNKGIRIDHI 226 + A + Y+ +D ++++ +N +D++ Sbjct: 346 ------LKFPGDYQQMIANLSAIEPRYSGYTASTFDPRINNFAGEALSGGENVEY-LDYV 398 Query: 227 MLSPEA-TSLLHSARID----TKPRGWTK--PSDHTPVIVSLD 262 M+S E + R+D T W SDH PV + Sbjct: 399 MVSNEYGVKSFNDNRVDVPRSTAESLWKHYNLSDHFPVSAVIK 441 >gi|163741385|ref|ZP_02148776.1| endonuclease/exonuclease/phosphatase family protein [Phaeobacter gallaeciensis 2.10] gi|161385119|gb|EDQ09497.1| endonuclease/exonuclease/phosphatase family protein [Phaeobacter gallaeciensis 2.10] Length = 241 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 33/267 (12%), Positives = 65/267 (24%), Gaps = 52/267 (19%) Query: 4 VTVATWNVN---SI--RARIHNLAAWIKENNPDIICLQET--KTED--KNFPFETLQSLN 54 + +A++N+ + R R I+ D++ LQE + P L Sbjct: 12 LRLASYNIQKSVGLDLRRRPRRTLQVIEGTGADLVLLQEADKRLPPRPAALPHFILDEAG 71 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 + I G A + ++ G +L + L Sbjct: 72 WQIV------DLGGAGSLGWHGNAVIWRGDGIELQDHGHIPLPGLEPRGAVWALFQTGLG 125 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 + + + + E+ A P + D Sbjct: 126 PLRVVGAH-------------LGLTTKARHEQVHHLAEVIAREPALPTVWAGDFN--DWS 170 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 + +L+ + + A +D I +S Sbjct: 171 RQPVLDHLAPELRFVPPRPSFPALRPMGA-------------------LDRIAVSAGLE- 210 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261 + + + R SDH PV L Sbjct: 211 -VVDSGVYR-ARPAHIASDHLPVWADL 235 >gi|154274436|ref|XP_001538069.1| predicted protein [Ajellomyces capsulatus NAm1] gi|150414509|gb|EDN09871.1| predicted protein [Ajellomyces capsulatus NAm1] Length = 1553 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 28/75 (37%), Gaps = 8/75 (10%) Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 + W G ID LSP L I + K SDH P+ +L++ Sbjct: 768 TTWQDRGSP-----GTTIDLTFLSPLLHDKLRRCAIAEEA---CKGSDHKPMETTLELTP 819 Query: 266 PRKKQQDSTSQNMKP 280 K+ + +N +P Sbjct: 820 IPKEAERRNWKNAEP 834 >gi|90420840|ref|ZP_01228745.1| possible endonuclease/exonuclease [Aurantimonas manganoxydans SI85-9A1] gi|90334815|gb|EAS48587.1| possible endonuclease/exonuclease [Aurantimonas manganoxydans SI85-9A1] Length = 347 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 41/240 (17%), Positives = 69/240 (28%), Gaps = 47/240 (19%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLP 84 I PDI+ LQET D ETL + H C G + +P T Sbjct: 138 IAAEAPDIVTLQET-GRDWQARLETLSATYPHQFYCSGPFAQGNVAILSKRPFVDETGYC 196 Query: 85 GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL 144 + AR I+ T+ T + P G+ + + ++ Sbjct: 197 DVENGFAARRIDFNGTVATIVSQHLQWPWPFGHWRQLADLQETLGLLR------------ 244 Query: 145 EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL 204 P++ AGD+N P T Sbjct: 245 -GPVLIAGDFNAAPWSAALETYAAASGTTPV-------------------------TGIG 278 Query: 205 YSFWDY-YADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +++ + + G+ IDH++ +P I SDH P+ + + Sbjct: 279 FTWLSRALPGALAPYIGLPIDHVLATPGIV-------IRKLGTLAPTASDHMPIAATFSL 331 >gi|323334754|gb|EGA76127.1| Apn2p [Saccharomyces cerevisiae AWRI796] Length = 330 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 39/138 (28%), Gaps = 17/138 (12%) Query: 2 SVVTVATWNVNSIRA------------RIHNLAAWIKENNPDIICLQETKTEDKNFPFET 49 + + T+NVN IR + ++ + + DII QE KTE + Sbjct: 9 NTIRFLTFNVNGIRTFFHYQPFSQMNQSLRSVFDFFR---ADIITFQELKTEKLSISKWG 65 Query: 50 LQSLNYHIETCGQKS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107 Y + Q Y+GV + + + + N + Sbjct: 66 RVDGFYSFISIPQNRKGYSGVGCWIRIPEKNHPLYHALQVVKAEEGITGYLTIKNGKHSA 125 Query: 108 IGNLYLPHGNPITSTKYD 125 I + D Sbjct: 126 ISYRNDVNQGIGGYDSLD 143 >gi|164687368|ref|ZP_02211396.1| hypothetical protein CLOBAR_01009 [Clostridium bartlettii DSM 16795] gi|164603792|gb|EDQ97257.1| hypothetical protein CLOBAR_01009 [Clostridium bartlettii DSM 16795] Length = 215 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 11/43 (25%) Query: 4 VTVATWNV--------NSIRARIHNLAAWIKENNPDIICLQET 38 + + ++N+ N R + +A ++K N DIICLQE Sbjct: 1 MKIISYNIHTGTDKDKN--RT-LRQMAKYLKIQNCDIICLQEV 40 Score = 44.4 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 10/47 (21%) Query: 215 WSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 ++KN RID+ +S T S +D SDH PVIV Sbjct: 177 FAKN---RIDYCFISENLT--AKSYTVDEVYM-----SDHFPVIVEF 213 >gi|150003207|ref|YP_001297951.1| putative endonuclease/exonuclease/phosphatase family protein [Bacteroides vulgatus ATCC 8482] gi|254882487|ref|ZP_05255197.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|294776025|ref|ZP_06741521.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides vulgatus PC510] gi|319640411|ref|ZP_07995133.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. 3_1_40A] gi|149931631|gb|ABR38329.1| putative endonuclease/exonuclease/phosphatase family protein [Bacteroides vulgatus ATCC 8482] gi|254835280|gb|EET15589.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|294450163|gb|EFG18667.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides vulgatus PC510] gi|317387898|gb|EFV68755.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. 3_1_40A] Length = 281 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 39/268 (14%), Positives = 82/268 (30%), Gaps = 27/268 (10%) Query: 7 ATWNV------NSIRA---RIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYH 56 AT+N+ +S+ R + +IK++ DI+ +QE + ++ + Sbjct: 28 ATFNIRYDNPQDSLNNWQYRKDRVCQFIKDHELDIVGMQEVLHNQFQDLRAGLPEYDGIG 87 Query: 57 IETCGQKSYNGVA-ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + K+ A + + E++ + + + + Sbjct: 88 VGRDDGKTAGEYAPLFYRKDKYEVLDSNTFWLAENPDSVGMMGWDAVCVRIATWAKFKDK 147 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + + R S L + + G+ DA Sbjct: 148 ATGKIFMAVNTHFDHVGEEARRQSALLIIRKIKEIVGER------PAVVTGDFNVTDASD 201 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDY-YADSWSKNKGIRIDHIMLSPEATS 234 E + + + + A R T Y+F D+ + K ID I ++P+ Sbjct: 202 AYETITTNEFVMKDAYKTAARV---TGVDYTFHDFARIPAEDCEK---IDFIFVTPQVL- 254 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + S I + SDH P + L+ Sbjct: 255 -VKSCEIPAEV-PEALLSDHNPQLADLE 280 >gi|110800029|ref|YP_694880.1| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens ATCC 13124] gi|110674676|gb|ABG83663.1| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens ATCC 13124] Length = 263 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 38/269 (14%), Positives = 77/269 (28%), Gaps = 20/269 (7%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQE----TKTEDKNFPFETLQSLN 54 + + T N +S +I LA I E D+I LQE K L+ N Sbjct: 1 MKLLTLNCHSWLEEEQLYKIKYLAKTIVEEKYDVIALQEASQSIKAS---IKEGNLKEDN 57 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 Y + + + KY + +H+ D + + +N+++ I + Sbjct: 58 YGLVLIEEINK---LGGEKYHLVWDYSHIGYDIYEEGLCILTKHKIVNSESFYISKSHCK 114 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 + ++ + H + Sbjct: 115 TFWRSRKIVKATIDIKNENIDFYSCHMGWWHDKEESFTFQVENLLAHAKESKNRAFFMGD 174 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD--SWSKNKG-IRIDHIMLSPE 231 F + + I + + S + W N G +RID I + Sbjct: 175 FNNNAFLKNEGYDFLKSNGLIDTYNLAENKDSGVTVNKNIAGWEDNTGELRIDIIFTNRN 234 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 + ++ +R+ + SDH + + Sbjct: 235 --TKVYDSRVIFNGKNKEVVSDHFGLEIE 261 >gi|302875724|ref|YP_003844357.1| Endonuclease/exonuclease/phosphatase [Clostridium cellulovorans 743B] gi|307689155|ref|ZP_07631601.1| Endonuclease/exonuclease/phosphatase [Clostridium cellulovorans 743B] gi|302578581|gb|ADL52593.1| Endonuclease/exonuclease/phosphatase [Clostridium cellulovorans 743B] Length = 263 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 40/272 (14%), Positives = 81/272 (29%), Gaps = 21/272 (7%) Query: 4 VTVATWNVNSIRAR--------IHNLAAWIKENNPDIICLQET---KTEDKNFPFETLQS 52 + T N + A I NLA IK+N D+I LQE K ++ F + ++ Sbjct: 1 MRFLTLNCH---AWHEENQLEKIKNLARVIKKNAYDVITLQEVSQSKDSEQMF--KDIKK 55 Query: 53 LNYHIETCGQKSYNGV-AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 NY + GV ++ I + + + + + ++ Sbjct: 56 DNYVFLLVEELGKLGVYDYSFFWEYNHISSGKYEEGTAILTKHPVGKIETSFLSISEDYS 115 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 + + E A + ++ + N Sbjct: 116 NWKTRKSVKNIIEYKNKEIAIFCCHLGFWDDSEEPFKQQADRLLEQVKENELTFLMGDFN 175 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 L+ + L + G D + + A ++ RID I+ + Sbjct: 176 S--DALKRNTGYDYLMSKGLYDTYNMAKEKDLGITVSGKIAGWEKNDEQKRIDLILTNTP 233 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + +R+ + SDH + V ++I Sbjct: 234 VE--VKYSRVIFNGENESIVSDHYGLEVEIEI 263 >gi|163734662|ref|ZP_02142101.1| hypothetical protein RLO149_14583 [Roseobacter litoralis Och 149] gi|161392155|gb|EDQ16485.1| hypothetical protein RLO149_14583 [Roseobacter litoralis Och 149] Length = 227 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 10/62 (16%) Query: 4 VTVATWNVN---SI--RARIHNLAAWIKENNPDIICLQE----TKTEDKNFPFETLQ-SL 53 + +A++N+ + R +A + E + D++ LQE T T P E L+ L Sbjct: 1 MKIASYNIRKAVGLDWRRDPERVADVLLEIDADVVVLQEADRRTGTRAGVLPIERLESEL 60 Query: 54 NY 55 Y Sbjct: 61 GY 62 Score = 37.5 bits (85), Expect = 2.2, Method: Composition-based stats. Identities = 9/46 (19%), Positives = 21/46 (45%), Gaps = 3/46 (6%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268 +D +L P + S+ + + SDH P+++++D + Sbjct: 185 LDLFVLGPGL--RVVSSHVHKSTLA-VRASDHLPIVITVDFTKAEP 227 >gi|149010614|ref|ZP_01831985.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pneumoniae SP19-BS75] gi|147765095|gb|EDK72024.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pneumoniae SP19-BS75] Length = 271 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 29/264 (10%), Positives = 69/264 (26%), Gaps = 14/264 (5%) Query: 4 VTVATWNVNSI--RARIHNL---AAWIKENNPDIICLQETK-------TEDKNFPFETLQ 51 + T N +S + I E + D+IC QE E + Sbjct: 1 MKFLTLNTHSWMEKEAEEKFQILLEDILEKDYDLICFQEINQEMTSSEVEVNDLYQALPA 60 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 + H + + + K + G + + I + I + + + ++ Sbjct: 61 AEPIHQDHYVRLLVEKLLEQGKNYYWTWAYNHIGYNRYHEGVAILSKTPIEAREILVSDV 120 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 P + + K + ++ ++ + Sbjct: 121 DDPTDYHTRRVALAETVVDGKELAVASVHLSWWDKGFQEEWARFEAVLKKLNKPLLLAGD 180 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 + +G DA + Y+ + +RID++ + E Sbjct: 181 FNNPAGQEGYQAILASPLGLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTTKE 240 Query: 232 ATSLLHSARIDTKPRGWTKPSDHT 255 + + + + SDH Sbjct: 241 LA--VENLHVVFDGNKSPQVSDHY 262 >gi|126730184|ref|ZP_01745996.1| Endonuclease/exonuclease/phosphatase [Sagittula stellata E-37] gi|126709564|gb|EBA08618.1| Endonuclease/exonuclease/phosphatase [Sagittula stellata E-37] Length = 239 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 28/66 (42%), Gaps = 14/66 (21%) Query: 2 SVVTVATWNVN---SI--RARIHNLAAWIKENNPDIICLQE------TKTEDKNFPFETL 50 + VA++N+ + R H + + E + D+I LQE T+ P + L Sbjct: 11 RSMRVASYNIRKAVGLDWRRDPHRVVDVLGEIDADVIALQEADRRIGTRA--GVLPLDRL 68 Query: 51 Q-SLNY 55 + L Y Sbjct: 69 ETELGY 74 Score = 37.1 bits (84), Expect = 3.1, Method: Composition-based stats. Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 3/39 (7%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +D +L P S SA + + SDH PV+V + Sbjct: 197 LDRFVLGPGLRS--VSAHVHHSALA-KRASDHLPVVVDI 232 >gi|3283068|gb|AAC72298.1| reverse transcriptase [Caenorhabditis elegans] Length = 1066 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 28/254 (11%), Positives = 67/254 (26%), Gaps = 24/254 (9%) Query: 5 TVATWNVNSIRARIHNLAAWIKEN---NPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 V T+N S+ + LA ++E D+I L ETK + + + Sbjct: 116 RVCTFNCRSL-SSDDRLAELLEETRRIQFDVIGLCETKRAAE---AHLIHHDGTGVFLGK 171 Query: 62 QKSYN-GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + + + + + + L + + + I + + Sbjct: 172 RNESSVSGGVGFIVRSTLLPKIVEVRFLSHRIGLLTFKVSRKFNCTVIQVYAPTADSDLE 231 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + +L + + G + + + Sbjct: 232 EICDFYDSVEDVFRECRSKYKLVIGDFNARMGCRQNNERYIGPHAMEPRNDTG-----EL 286 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + N + H ++F + + IDHI+ + + + Sbjct: 287 LATFCETNRLWHTNSMFKKPMHKRWTFVSPDGNHRHE-----IDHILANGKF---VTDTT 338 Query: 241 IDTKPRGWTKPSDH 254 + +T SDH Sbjct: 339 VLP---SFTNGSDH 349 >gi|21326501|gb|AAM47629.1|AC122147_18 Putative non-LTR retroelement reverse transcriptase [Oryza sativa Japonica Group] Length = 1345 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 35/259 (13%), Positives = 71/259 (27%), Gaps = 33/259 (12%) Query: 6 VATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNF-PFETLQSLNYHI-ETCG 61 + WNV + + R ++ +++ N I+CLQETK + L +L Sbjct: 389 ILNWNVRGLNSQVRKKSVKLLVEQMNATIVCLQETKMN--QISDVDVLHTLGSRFKNEFA 446 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +G + L + T + I +Y P + Sbjct: 447 FLPADGTRGGILLACNDNYFSLSNVLRKQYSLTATVTMKNDGIAWTITVVYGPQQDAQKI 506 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + + + + + N + + LEV++ Sbjct: 507 EFITELQEIKQLVMSPWLLIGDFNLIYKTSDKNNSR----LNRSMMQRFKGTLDRLEVKE 562 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 + +T + ID P+ L SA++ Sbjct: 563 LPLSGRKFTWTQECDNPTQSK--------------------IDRAFCCPDWDVLFDSAQM 602 Query: 242 DTKPRGWTKPSDHTPVIVS 260 + SDH P+ ++ Sbjct: 603 YA---LSSSCSDHAPLFIT 618 >gi|76787484|ref|YP_330513.1| hypothetical protein SAK_1919 [Streptococcus agalactiae A909] gi|77405063|ref|ZP_00782163.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus agalactiae H36B] gi|76562541|gb|ABA45125.1| RgfB protein [Streptococcus agalactiae A909] gi|77176357|gb|EAO79126.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus agalactiae H36B] Length = 276 Score = 46.7 bits (109), Expect = 0.003, Method: Composition-based stats. Identities = 43/286 (15%), Positives = 82/286 (28%), Gaps = 38/286 (13%) Query: 2 SVVTVATWN------VNSIRARIHNLAAW---IKENNPDIICLQETKTEDKNFPFETLQS 52 S+ T N VN + L I DIICLQE S Sbjct: 5 SMAKCLTLNTHSWMEVN----ALKKLFDLAEHIFREKYDIICLQEV--NQSISSPLAKSS 58 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 NYH + L + +L G + ++ + + I +L Sbjct: 59 PNYHPIEGTPALHQDNFAL----QLVHYLNLQGLHYHWTWAYNHIGYSKYHEGVAILSLK 114 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 N I + DD+ + R A L + + + ++ Sbjct: 115 PLKPNDILVSAVDDETDYHTRRALVAETTLNDKVVTVVS--LHLSWFEKGFAEEWKRLET 172 Query: 173 ACFTLEVRQSFQKLQNMGF---------------TDAIRATHDTHHLYSFWDYYADSWSK 217 +E N D+ + + ++ Sbjct: 173 TLLEVETPLLLMGDFNNPTGNQGYELVLNSPLALKDSHQIANHVFGDHTIMADIDGWEGN 232 Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 K +++DHI S + + S+++ + SDH + ++L++ Sbjct: 233 KKALKVDHIFTSEDL--SISSSQVVFEGGEAPVVSDHYGLEITLNL 276 >gi|168484835|ref|ZP_02709780.1| metal-dependent hydrolase [Streptococcus pneumoniae CDC1873-00] gi|172042000|gb|EDT50046.1| metal-dependent hydrolase [Streptococcus pneumoniae CDC1873-00] Length = 271 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 29/264 (10%), Positives = 70/264 (26%), Gaps = 14/264 (5%) Query: 4 VTVATWNVNSI--RARIHNL---AAWIKENNPDIICLQETK-------TEDKNFPFETLQ 51 + T N +S + I E + D+IC QE E + Sbjct: 1 MKFLTLNTHSWMEKEAEEKFQILLEDILEKDYDLICFQEINQEMTSSEVEVNDLYQALPA 60 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 + H + + ++ K + G + + I + I + + + ++ Sbjct: 61 AEPIHQDHYVRLLVEKLSEQGKNYYWTWAYNHIGYNRYHEGVAILSKTPIEAREILVSDV 120 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 P + + K + ++ ++ + Sbjct: 121 DDPTDYHTRRVALAETVVDGKELAVASVHLSWWDKGFQEEWARFEAVLKKLNKPLLLAGD 180 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 + +G DA + Y+ + +RID++ + E Sbjct: 181 FNNPAGQEGYQAILASPLGLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTTKE 240 Query: 232 ATSLLHSARIDTKPRGWTKPSDHT 255 + + + + SDH Sbjct: 241 LA--VENLHVVFDGNKSPQVSDHY 262 >gi|150008485|ref|YP_001303228.1| hypothetical protein BDI_1871 [Parabacteroides distasonis ATCC 8503] gi|149936909|gb|ABR43606.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503] Length = 304 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 40/283 (14%), Positives = 92/283 (32%), Gaps = 35/283 (12%) Query: 2 SVVTVATWNV--NSIRARIH--NLAAWIKENNPDIICLQETKTEDKN------FPFETLQ 51 + V V+++N+ N++ ++ A I+ + DI+ +QE +++ P E + Sbjct: 26 ATVKVSSFNIWLNTLGGKLPPSQTAKVIEASQTDIVGIQEGHIYEEDGIKHDHVP-EIAE 84 Query: 52 SLNYHIETCGQKSYN-------GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 SL +H+ G+ Y I++ + +I Sbjct: 85 SLGFHLFNQGEGHYILSRYPVVDSTASRYGVKIQVGKDKFCWMFNCHLYYIPYQPYQLNG 144 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 ++ + + + R+ + Q ++ P+ GD+N + Sbjct: 145 IPYGDYPFIDTEEEAVRFANEARREEVTRYQKDIQQVMKEGYPVFLTGDFNEP--SFLDW 202 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH---HLYSFWDYYADSWSKNKGI 221 + D + + +G D+ R H Y++ + ++ Sbjct: 203 TQRAADADIHKIKVEWPATKAFSEIGMNDSYRTIHPDEVSTPGYTWTPVPS---EQDILD 259 Query: 222 RIDHIMLSPEATSLLHSARI------DTKPRGWTKPSDHTPVI 258 R+D ++ S + + I + PSDH V Sbjct: 260 RLDFVLYSG---CKVTDSFITGESEATSDVVVSPYPSDHRMVT 299 >gi|114798114|ref|YP_760171.1| endonuclease/exonuclease/phosphatase family protein [Hyphomonas neptunium ATCC 15444] gi|114738288|gb|ABI76413.1| endonuclease/exonuclease/phosphatase family protein [Hyphomonas neptunium ATCC 15444] Length = 442 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 40/278 (14%), Positives = 76/278 (27%), Gaps = 35/278 (12%) Query: 4 VTVATWN------VNSI----R--ARIHNLAAWIKENNPDIICLQET-------KTEDKN 44 + +A WN V+ R A + +A +I + DI LQE + Sbjct: 178 LRIAAWNTEHLTAVSGAGCFPRDEAALDLIADYITRVDADIWLLQEVDGDGALARVFGDG 237 Query: 45 FPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 + F Q + +G + ++ I + + D L A Sbjct: 238 WTFHVEQRAGGETYPLCRGRDDGTRLRAQNTAIAVRDGITHDRLPDLAALDLTGEGRTRY 297 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 + I L P I S +R + + + + + + Sbjct: 298 GVAI-TLPGPVPTDIMSVHLTSGCFSGDTSVRCPALFDQADVLEAWIDQRSAAGRAVIVG 356 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRID 224 +A Y + ID Sbjct: 357 GDFNRRLEAEDDPVWTGLNDGTPAGLHIAGAGTGPSCDPRYREF--------------ID 402 Query: 225 HIMLSP-EATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 ++LS T ++ + +T +PSDH P+ +S+ Sbjct: 403 FLLLSDTALTRMVAGSFRETTYDTPARPSDHCPISLSI 440 >gi|296122827|ref|YP_003630605.1| endonuclease/exonuclease/phosphatase [Planctomyces limnophilus DSM 3776] gi|296015167|gb|ADG68406.1| Endonuclease/exonuclease/phosphatase [Planctomyces limnophilus DSM 3776] Length = 321 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 40/291 (13%), Positives = 86/291 (29%), Gaps = 39/291 (13%) Query: 3 VVTVATWNV-----NSIRARIHNLAAWIKENNPDIICLQETK--TEDKNFPFETLQSLNY 55 VV V ++N+ + + A I+E D++ LQET+ + + + Sbjct: 35 VVRVMSYNLWHGGDAG-KQPLEQTAKVIREARADLVGLQETRGYATGGQPRPDRAKEIAQ 93 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + G AILS+Y + G +++ + + + + Sbjct: 94 ILGWNYFDQGGGTAILSRYPIGKASPGKWGVEIEHPSG-----TKLYLFNAHLMYIPYQP 148 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII------------PQPHDC 163 + D ++ +++ E+ D Sbjct: 149 YQLLNIPYGDYPFIKTEQEAIDFAKKARGEQVERLIADIKATVPADATVFVTGDFNEPSH 208 Query: 164 YNPIIWENDACFTLEVRQSF--QKLQNMGFTDAIRATHDTH---HLYSFWDYYADSWSKN 218 ++ A + + GF D R H ++ + K+ Sbjct: 209 WDWTAAAQKAGRCPIAVKWPSTSMMAETGFIDTYREAHPDPVTAPGITWTPLTKITDPKD 268 Query: 219 KGIRIDHIMLSPEATSLLHSARID------TKPRGWTKPSDHTPVI--VSL 261 + RID +++ + S+++ PSDH V+ V L Sbjct: 269 RHDRIDFVLMRQG-GGKVLSSQVLGESKEAADVVVIPYPSDHRSVVSAVEL 318 >gi|308273030|emb|CBX29634.1| hypothetical protein N47_J06150 [uncultured Desulfobacterium sp.] Length = 273 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 36/239 (15%), Positives = 66/239 (27%), Gaps = 27/239 (11%) Query: 31 DIICLQETKTEDKNFPF--ETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDL 88 D QE D F + L NY + +Q I + + Sbjct: 58 DFYAFQE--ANDFQIDFLSDLLPDYNY--------IGRRQPAPAYWQHNIIFYNKSWKCV 107 Query: 89 DVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQR-LELEEP 147 ++ +T + ++ + + + Sbjct: 108 YCNHFYLSSTPN--------MPSRFRGSKWPRQCTLGIFNNGLQNLIIVNTHFDFSSDVQ 159 Query: 148 LIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF 207 + A + H PII D T + + + + + + Sbjct: 160 VKSAKLIRKRLRRHSKKGPIILMGDFNATPDSGCYNEFTSKVDAYPKFFDAFNNSAIRTC 219 Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEP 266 + KNKG ID I+ S + ++++ T PSDH P+I S P P Sbjct: 220 HRFSG----KNKGEAIDWILYSGNLI--IDNSQVITSKFSGRYPSDHYPLIASFVFPSP 272 >gi|294868438|ref|XP_002765538.1| hypothetical protein Pmar_PMAR002075 [Perkinsus marinus ATCC 50983] gi|239865581|gb|EEQ98255.1| hypothetical protein Pmar_PMAR002075 [Perkinsus marinus ATCC 50983] Length = 965 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 24/35 (68%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQET 38 +TV ++N++ + L +++ ++PD++CLQET Sbjct: 23 LTVISYNIHGLCGSKLELLQYLRRSSPDVVCLQET 57 >gi|327541576|gb|EGF28107.1| secreted protein containing Endonuclease/exonuclease/phosphatase domain [Rhodopirellula baltica WH47] Length = 284 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 34/252 (13%), Positives = 72/252 (28%), Gaps = 39/252 (15%) Query: 19 HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIE 78 LA + +PDII E + + E + L + N L I Sbjct: 64 KRLAMELALYDPDIINFSE--SPSEKLTKEIAELLGMN-HVRFPSGGNWPGTLLSKSKIS 120 Query: 79 IVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFA 138 ++P + + F + L + + + + ++ I+ + Sbjct: 121 DPQNVPMNGERPKELFTRHWGRALVELPNDEPLIVHSAHLYPTPEPTIRLKEIRAMIESM 180 Query: 139 SQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT 198 L+ ++ GD N P + I + G+ D Sbjct: 181 KSDLDSGRSMLLIGDLNHSPDTDEYKLWI--------------------DAGWIDTFAKV 220 Query: 199 HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA--------RIDTKPRGWTK 250 + + ++ + N RID++ + + + R++ + Sbjct: 221 GEGNG-FT-------IKADNPEWRIDYVFATGPIAKRVSESRPLFEGAFRVNNEDEKSYA 272 Query: 251 PSDHTPVIVSLD 262 SDH P D Sbjct: 273 LSDHLPQFAVFD 284 >gi|322376933|ref|ZP_08051426.1| RgfB protein [Streptococcus sp. M334] gi|321282740|gb|EFX59747.1| RgfB protein [Streptococcus sp. M334] Length = 271 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 32/273 (11%), Positives = 79/273 (28%), Gaps = 16/273 (5%) Query: 4 VTVATWNVNSI--RARIHNLAAWIKE---NNPDIICLQETK-------TEDKNFPFETLQ 51 + T N +S + +++ + D+IC QE E + Sbjct: 1 MKFLTLNTHSWMEKEAEEKFQLLLEDVLDKDYDLICFQEINQEITSSEVEVNDLYQALPA 60 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 + H + + ++ K + G D + I + I + + + ++ Sbjct: 61 AEPIHQDHYVRLLVEKLSEQGKNYYWTWAYNHIGYDRYHEGVAILSKTPIEAREILVSDV 120 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG-DYNIIPQPHDCYNPIIWE 170 P + + K + ++ + + + + + + Sbjct: 121 DDPTDYHTRRIALAETVVDGKELAVASVHLSWWDKGFQEEWARFEAVLKELNKPLLLAGD 180 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230 + E Q+ +G DA + Y+ + +RID+I + Sbjct: 181 FNNPAGQEGYQAILASP-LGLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYIFTTK 239 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 E + + + SDH + L+ Sbjct: 240 ELA--VEKLHVVFDGNKSPQVSDHYGLNAILNW 270 >gi|167522888|ref|XP_001745781.1| hypothetical protein [Monosiga brevicollis MX1] gi|163775582|gb|EDQ89205.1| predicted protein [Monosiga brevicollis MX1] Length = 481 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Query: 191 FTDAIRATHDTHH-LYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 D+ H T ++ WD Y + +N+G RID+++L + LL + Sbjct: 235 MLDSFTTLHPTAQARFTCWDQYKNRRYENRGSRIDYVLLDQDLAGLLVGS 284 >gi|158293194|ref|XP_558090.3| AGAP010556-PA [Anopheles gambiae str. PEST] gi|157016841|gb|EAL40350.3| AGAP010556-PA [Anopheles gambiae str. PEST] Length = 876 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 41/298 (13%), Positives = 74/298 (24%), Gaps = 39/298 (13%) Query: 7 ATWNVNSIRARIHNLAAWIKENN--PDI--ICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 ATWNVN + L W+ + PDI + QE + + + ++ Sbjct: 204 ATWNVNGQTSETIELPEWLATTDSPPDIYAVGFQEIEWTPEKILMNETKIDRTWVDKVMS 263 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 + G + + + + + + G S Sbjct: 264 GLHKGAIYTELASVRLV--GMMLTVAVKSTIYPKINDCLTAAVGTGTLKWGNKGGVGVSF 321 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 K ++ + A + + + I E+ F + Sbjct: 322 KLNEALFCFVNTHLAAHTQEVERRNDDHDDIIRRMSFDNGFRMRSIDEHHHIFWIGDLNY 381 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH----IML---------- 228 + R D + LY D +N+ R D+ I+ Sbjct: 382 RLDGPEVSQEYVNRKDRDYNQLYQH-DQLYVEKRRNRIFR-DYKEGKILFPPTYKYNPGT 439 Query: 229 ----------SPEATSLL--HSARI----DTKPRGWTKPSDHTPVIVSLDIPEPRKKQ 270 +P + RI K SDH PV + K Q Sbjct: 440 DEWDSSEKSRTPAWCDRILWKGQRIEMLRYNSVMQLRK-SDHKPVYADFKVDAQAKDQ 496 >gi|313682984|ref|YP_004060722.1| endonuclease/exonuclease/phosphatase [Sulfuricurvum kujiense DSM 16994] gi|313155844|gb|ADR34522.1| Endonuclease/exonuclease/phosphatase [Sulfuricurvum kujiense DSM 16994] Length = 335 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 43/322 (13%), Positives = 82/322 (25%), Gaps = 67/322 (20%) Query: 4 VTVATWNV------------------NS--------IRARIHNLAAWIKENNPDIICLQE 37 V +AT+NV N RA++ N A I+ DII LQE Sbjct: 19 VKIATYNVENLFDMHYDGTEYEEYIPNGDWGWTNEMYRAKLINTATVIRGIGADIIGLQE 78 Query: 38 TKTED--KNFPFETLQ---SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQA 92 ++E K+ E + Y+ + S VA+LS+Y + H + Sbjct: 79 IESESALKDLKAEINRQGLYYPYYAFAKTRNSAVNVALLSRYPIQSALKHPVNYSGKYRD 138 Query: 93 RFIEATFTINTQTLRIGNLYLPHGNP-----ITSTKYDDKISWIKRFLRFASQRLELEEP 147 N + G P + + + +++ + + Sbjct: 139 ILEAKILIEEKPLRVFVNHWKSKGGPESERIVCAKRLLQRLNELPEDEPYVLVGDFNSHY 198 Query: 148 LIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF 207 + I E ++ Sbjct: 199 EEHKTFLKSRKHNNTDGITGINHILGTVNKEGNPITYTALKNTQGVRYNLWYELDKEKR- 257 Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLL------------------HSARIDTKPRGWT 249 W + + G +D+I++S + ++ + Sbjct: 258 WSHQF----RGHGEGLDNIIISQALADGIGIDYIEGSFDRYTPDYLFAKGKVYRWQQSRR 313 Query: 250 KP--------SDHTPVIVSLDI 263 P SDH P+ + Sbjct: 314 YPKHHLGEGYSDHLPIYARFKL 335 >gi|150390789|ref|YP_001320838.1| endonuclease/exonuclease/phosphatase [Alkaliphilus metalliredigens QYMF] gi|149950651|gb|ABR49179.1| Endonuclease/exonuclease/phosphatase [Alkaliphilus metalliredigens QYMF] Length = 379 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 35/261 (13%), Positives = 68/261 (26%), Gaps = 45/261 (17%) Query: 4 VTVATWNVN------SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57 + + ++N++ R + +A IKE+ ++I LQE D++F Q Sbjct: 152 LRIMSYNIHIGRDLFG-RYSLDQIAEVIKESRAEVIGLQEV---DQHFIRTKFQD----- 202 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 S + + IV G+ + + + L + Sbjct: 203 -QIKYLSEELGMNYAYGPNLNIVGAKYGNAVLSVHPIEDYENVMIPSGRESRGLLKTTID 261 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 Q +E+ + A + I+ + L Sbjct: 262 VEGQLVDFFVTHLGLNQKERMGQVKVIEQQIDMAQNPVILVGDFNARPHSQEIQKLSRGL 321 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 + D + RID+I + + Sbjct: 322 LDVGKRMGYNDTPTFDLPVLSG----------------------RIDYIFVDQQM----- 354 Query: 238 SARIDTKPRGWTKPSDHTPVI 258 I T ++ SDH PV Sbjct: 355 --EILTYRVIKSRASDHYPVT 373 >gi|115689672|ref|XP_796533.2| PREDICTED: similar to CCR4 carbon catabolite repression 4-like [Strongylocentrotus purpuratus] gi|115945120|ref|XP_001179947.1| PREDICTED: similar to CCR4 carbon catabolite repression 4-like [Strongylocentrotus purpuratus] Length = 365 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 42/284 (14%), Positives = 77/284 (27%), Gaps = 56/284 (19%) Query: 4 VTVATWNV----------NSIR---------ARIHNLAAWIKENNPDIICLQETKTEDKN 44 V V WN+ N I+ R + + I +PD++CLQE ++ Sbjct: 107 VRVMAWNILADALSMGADNFIKCPKESLLWDNRKYAIIEEILTYDPDVVCLQEVD-HYED 165 Query: 45 FPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 F LQ + Y + + G + ++ Sbjct: 166 FFLPVLQQVGYSGAFNPKPDSP-----------CLEVDYNGKKFVSNQVAVMHHLKCISE 214 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 L + + Y+ + + L ++ PLI GD+N P Sbjct: 215 KLLDEEFCIATTHLKAKHGYETMRAKQGQHLIEVLKKCSKNLPLIVGGDFNAEPTE---- 270 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRID 224 D E + Y+ W + ID Sbjct: 271 -------DVYSVYETSDLNL----ASAYKKLSEDGMQEPPYTTWKIRPRREECHT---ID 316 Query: 225 HIMLSPEATSLLH------SARIDTKPR-GWTKPSDHTPVIVSL 261 ++ + E + I ++ W+ PSDH ++ Sbjct: 317 YMWYTQEHLEPVALLRFPGEKEIGSERLPSWSYPSDHLSLVCDF 360 >gi|57863772|ref|NP_001009928.1| nocturnin [Gallus gallus] gi|33323505|gb|AAQ07476.1|AF503351_1 nocturnin [Gallus gallus] Length = 419 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 35/264 (13%), Positives = 71/264 (26%), Gaps = 28/264 (10%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFP--FETLQSLNYHIETCGQKSYNGVAILSKYQPIE 78 + I PDI+CLQE D F L L Y + S +E Sbjct: 167 ILEEILAYKPDILCLQEV---DHYFDTFEPLLSRLGYQCTFFPKP-------WSPCLDVE 216 Query: 79 IVTHLPGDDLDVQARFIEATFT--INTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 G L E + I +++ + + ++ L+ Sbjct: 217 QNNGPDGCALFFLKERFELINSANIRLTAMKLKTNQVAIAQTLKCSETGRLFCIAVTHLK 276 Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN----MGFT 192 + N+ P+I D + + Sbjct: 277 ARTGWERFRSAQGCDLLQNLKSITQGAKIPLIICGDFNAEPTEEVYREFSNSSLNLNSAY 336 Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR------ 246 + + Y+ W ++ +D+I S A ++ + + T+ + Sbjct: 337 KLLSPDGQSEPPYTTWKIRPSGECRHT---LDYIWYSQHALNVNSALGLLTEEQIGPNRL 393 Query: 247 -GWTKPSDHTPVIVSLDIPEPRKK 269 + PSDH ++ + + Sbjct: 394 PSFNYPSDHLSLVCDFSFNQDPDR 417 >gi|308471696|ref|XP_003098078.1| hypothetical protein CRE_11299 [Caenorhabditis remanei] gi|308269419|gb|EFP13372.1| hypothetical protein CRE_11299 [Caenorhabditis remanei] Length = 943 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 43/280 (15%), Positives = 89/280 (31%), Gaps = 25/280 (8%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENN---PDIICLQETKTEDKNFPFETLQSLNYHIETC 60 + + T+N S+ A + LA ++E N DII L ETK + Sbjct: 21 LRICTFNCRSV-ATDNRLAELLEETNRIKYDIIGLSETKRSAE-VHMTNRDGTG---VIL 75 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 G+++ + V+ + + + + V R T +N I Y P + Sbjct: 76 GKRNDSSVSGGVGFIINKSLMPKIKEIKIVNHRIGYLTLQVNKNQYTIIQGYAPTADYEE 135 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + + + S+ + + + + ND+ L Sbjct: 136 EDHSNFYENLEDVYKSCKSRYKMVIGDFNARIGERKGNEVFIGPHSMENRNDSGERL--- 192 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + N F + TH +++ + +DHI+ + + Sbjct: 193 -ATFCEVNRVFHMNSQFIKPTHRRWTYISPDKQHRHE-----LDHILANG---KYITDVS 243 Query: 241 IDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 + +T SDH + ++ I + K + + KP Sbjct: 244 V---VPSFTNGSDHRMLRANVHINAKQAKFEQV--KRRKP 278 >gi|237710997|ref|ZP_04541478.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|229454841|gb|EEO60562.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] Length = 334 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 40/257 (15%), Positives = 76/257 (29%), Gaps = 37/257 (14%) Query: 4 VTVATWNVNSIRARIHNL---AAWIKENNPDIICLQE---TKTEDKNFPFETLQSLNYHI 57 + + WN R L A I+ P I+CLQE T + Y I Sbjct: 96 LKLVCWNTEGFRLNKDTLTKAAHSIRVLQPGIVCLQERPHTNLLAWDTIRAAFPDYPYCI 155 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 + +A+ S++ + + + + ++A + QT R+ N++L Sbjct: 156 INSREDEVLNLAVFSRWPIGNVQEYYF---PNSYNKILQADIQMTGQTFRLFNVHLQTTG 212 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 S + + +R + + + L+ C + + Sbjct: 213 MNES----YSMKDRFQAMRHHTVQRNRQADLLTKAIAESPYPVIVCGDFNDTPASYAYRK 268 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 R G T + Y W + +RID+ SP Sbjct: 269 ISRLLQDCFLQAGQTWS--------GSYQCW----GGF-----LRIDYTFCSPAF----- 306 Query: 238 SARIDTKPRGWTKPSDH 254 +++ SDH Sbjct: 307 --QVNRYLLISNPWSDH 321 >gi|218264352|ref|ZP_03478209.1| hypothetical protein PRABACTJOHN_03900 [Parabacteroides johnsonii DSM 18315] gi|218222083|gb|EEC94733.1| hypothetical protein PRABACTJOHN_03900 [Parabacteroides johnsonii DSM 18315] Length = 287 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 40/271 (14%), Positives = 76/271 (28%), Gaps = 32/271 (11%) Query: 4 VTVATWNVNSIRA------------RIHNLAAWIKENNPDIICLQETKTEDKNFP--FET 49 + V ++N IR R A IK + D+ QE + Sbjct: 27 MNVMSFN---IRMSTKSDGANWWEYRKDLAANVIKFYDVDMFGAQEV--LHNQLTDLLDR 81 Query: 50 LQSLNYHIETCGQKSYNGVA--ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107 L Y G I + +V + + + + + Sbjct: 82 LPDYGYVGVGREDGKTKGEYSPIFYRKDRFSVVKSGNFWLAEDMNAVGKKGWDAACERVA 141 Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167 ++ + + + + + R L LE+ + AG+ +I P Sbjct: 142 TWAVFKDKESEKEFFFLNTHLDHMGQIARHEGASLVLEQVKLLAGNLPVIVTGDFNAVPT 201 Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227 + + A ++F DY ++ + ID+I Sbjct: 202 DDPIKVLTDEKDLR-------HLTHTRTLAPLCYGPEWTFHDY--GRVPLDERVWIDYIF 252 Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVI 258 + + + T+ G PSDH PVI Sbjct: 253 IKGNI--KVLRHGVLTESLGNLYPSDHCPVI 281 >gi|312214267|emb|CBX94260.1| hypothetical protein [Leptosphaeria maculans] Length = 1190 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 50/328 (15%), Positives = 80/328 (24%), Gaps = 68/328 (20%) Query: 2 SVVTVATWNVNSIR----ARIHNLAAW---IKENNP--DIICLQETKTEDK--NFPFETL 50 S + + T N ++ R L I P DI+ LQE T++ +T Sbjct: 10 SSLRILTLNCWGLKFISKLRHERLTEIGVQIAAAKPTPDIVGLQECWTQEDYNAIREKTH 69 Query: 51 QSLNYHIETCGQKSYNGVAILSKYQPI---EIVTHLPGDDLDVQARFIEATFTINTQTLR 107 L Y G+AILSK+ + L G + +R Sbjct: 70 HILPYGKFYWSGIFGGGLAILSKWPIEESNMVRYPLNGRPAAFYRGDWFVGKGVACARIR 129 Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIF------------AGDYN 155 +G + + E + GD+N Sbjct: 130 MGPSRRDVAEVFCTHLHAPYEREPHDSYICHRTAQAWEITKLMRAAAERGHLVIGLGDFN 189 Query: 156 IIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY---------- 205 ++P + + R Y Sbjct: 190 MVPLSLAHRIIETHSPVKDVWRILHPDSSIGAAKDAVEQARERPMPTAEYNMTINGATCD 249 Query: 206 ----SF-WDY---YADSWSKNKGI----------RIDHIMLS-----------PEATSLL 236 S+ W+ + +N I R+D+I S A L Sbjct: 250 SALNSWRWNQAHKRRLARGENVQIEPTVPDPDAKRLDYIFFSSPRYRDGGTGNEAADWEL 309 Query: 237 HSARI---DTKPRGWTKPSDHTPVIVSL 261 A + P SDH V +L Sbjct: 310 KEANVGMEMRHPTLHCSLSDHFSVEATL 337 >gi|312864007|ref|ZP_07724243.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus vestibularis F0396] gi|311100420|gb|EFQ58627.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus vestibularis F0396] Length = 271 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 29/276 (10%), Positives = 70/276 (25%), Gaps = 26/276 (9%) Query: 4 VTVATWNVNSIRARIH----NLAAWIKEN----NPDIICLQETKTEDKNFPFETLQ-SLN 54 + T N +S + +KE DIIC QE ++ ++ Sbjct: 1 MKFLTLNTHS---WMEEDAEGKFQTLKEQILKAQYDIICFQEV---NQEIETAAVETDAY 54 Query: 55 YHIETCGQKSYNGVAIL---------SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT 105 YH + + + G D + + + + + Sbjct: 55 YHALPSATPIHQDHFVRLLVEKLAEEGLQYHWTWAYNHIGYDHLNEGVAVLSRQPLTSSE 114 Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165 + + ++ P + + + ++ Sbjct: 115 ILVSDVDDPTDYHTRRVAVAETAVDGREVAVASVHLSWWDKGFQEEWARIEGRFQSIGKP 174 Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225 I+ + + D+ + +T+ Y+ + +RID+ Sbjct: 175 LILAGDFNNPAGREGYQAILASPLTLQDSFQVAQETNGSYTVGPGIDGWKGNEEPLRIDY 234 Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + S E ++ + SDH + L Sbjct: 235 VFASQEWA--VNHLSVIFDGNNQPLVSDHYGLEAEL 268 >gi|262037338|ref|ZP_06010804.1| endonuclease/exonuclease/phosphatase [Leptotrichia goodfellowii F0264] gi|261748641|gb|EEY36014.1| endonuclease/exonuclease/phosphatase [Leptotrichia goodfellowii F0264] Length = 249 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 38/255 (14%), Positives = 71/255 (27%), Gaps = 59/255 (23%) Query: 20 NLAAWIKENNPDIICLQET-----KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKY 74 + +IK NPDI+ L E +TE+KN + H + N + Sbjct: 36 RIGEFIKGYNPDIVGLVEVDLGSFRTEEKNQAELLGKITGNHCVFQYKYQKNSRYMKVPM 95 Query: 75 QPIE------IVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKI 128 + + + I T ++ + ++L G + Sbjct: 96 VRKQGNALLSKTEIKSKKFHYLNNGMKKLVMEIETDSVTVFLVHLALGGKTRLKQIVQLR 155 Query: 129 SWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN 188 I+ + I AGD+N++ + L + S N Sbjct: 156 KLIQDCRKP----------FIVAGDFNVL------------WGNEEIELFLEASGLHNVN 193 Query: 189 MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGW 248 + + +D I+ S E + ++ Sbjct: 194 VHREPTFPSWAPKKE-------------------LDFILCSKEI--KVKEFQVIKTLL-- 230 Query: 249 TKPSDHTPVIVSLDI 263 SDH PVI+ +I Sbjct: 231 ---SDHLPVIIDFEI 242 >gi|118374759|ref|XP_001020567.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena thermophila] gi|89302334|gb|EAS00322.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena thermophila SB210] Length = 253 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 45/274 (16%), Positives = 84/274 (30%), Gaps = 55/274 (20%) Query: 6 VATWNV----------NSIRARIHNLAAWIKENNPDIICLQET----------KTEDKNF 45 + +N+ N I + + I+ NPD+ICLQE + + Sbjct: 11 IICYNIHHGADVNDNYN-----IQKIISTIENQNPDVICLQEVDNNYSERSLNQLQP-QI 64 Query: 46 PFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT 105 + +Q + + K+ G+ LSK + I+ T + L F Q Sbjct: 65 LTQQIQGIKESYFSPTIKNSYGILTLSKQKIIDYHTQILTTGLKEDRTFQYLKLQNGLQI 124 Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165 + + + F ++L+++ I GD+N Sbjct: 125 IHFHLNNSFD------QQRSRYHQLLTIFEILDKKQLDIKNNTIICGDFNEDCDGQRYCE 178 Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225 QK + + +LY+F KN IDH Sbjct: 179 EEC---------VFDLLEQKKFFNAKKLYEQKSGTQDNLYTF-----SRKYKNIN--IDH 222 Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 ++ + ++S +I SDH P+ + Sbjct: 223 FYVTNDI--NINSFKIIDSD-----ASDHNPIFL 249 >gi|294852706|ref|ZP_06793379.1| endonuclease/exonuclease/phosphatase [Brucella sp. NVSL 07-0026] gi|294821295|gb|EFG38294.1| endonuclease/exonuclease/phosphatase [Brucella sp. NVSL 07-0026] Length = 275 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 27/141 (19%), Positives = 46/141 (32%), Gaps = 24/141 (17%) Query: 145 EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL 204 E + GD+N + + +E + L GF + Sbjct: 136 ERRWLICGDFNDYRERILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDR 195 Query: 205 YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA-------------------RIDTKP 245 ++ + ++D+IM SP + A +D P Sbjct: 196 WTLYHTRGPLER--HLCQLDYIMASPAFAAKNEHAVPDIIRRGQPWRTIFPPEQNVDRYP 253 Query: 246 R-GWTKP--SDHTPVIVSLDI 263 R GW +P SDH PV V+L++ Sbjct: 254 RTGWDRPKASDHCPVSVTLNM 274 >gi|73964664|ref|XP_849457.1| PREDICTED: similar to a disintegrin and metalloprotease domain 6, partial [Canis familiaris] Length = 904 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 39/110 (35%), Gaps = 12/110 (10%) Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 + E R L M FTD R H Y+F+ ++S RIDHI+ Sbjct: 9 KHNISKETRALSDTLDQMDFTDIYRTLHPNSTEYTFFSGAHGTFS-----RIDHILGHKS 63 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 + SDH + + L+ +K + S + ++ I Sbjct: 64 GLNRYQKIGTIRCI-----FSDHNALKLELN--HNKKFGRTSNTWRLRTI 106 >gi|218661945|ref|ZP_03517875.1| putative exodeoxyribonuclease III [Rhizobium etli IE4771] Length = 37 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%) Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI-PEPRKK 269 + SA I+ R W KPSDH PVI D+ P+ R Sbjct: 1 DRMTSAAIEKHVRAWEKPSDHVPVIAYFDLRPDIRSP 37 >gi|149641541|ref|XP_001509976.1| PREDICTED: similar to angel homolog 2 (Drosophila) [Ornithorhynchus anatinus] Length = 523 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 21/131 (16%), Positives = 41/131 (31%), Gaps = 5/131 (3%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73 R N+ IK N D++CLQE ++ ++ E L+SL YH E + Sbjct: 178 RFPNILKEIKHLNADVLCLQEV--QENHYKKEIRPSLESLGYHCEFKMRTGRKPDGCAIC 235 Query: 74 YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKR 133 ++ + + L + + P + + + R Sbjct: 236 FKFSKFALVSANPVEFYRHNIPLLDRDNVGLVLLLQPKFQYTATPAALCVANTHLLYNPR 295 Query: 134 FLRFASQRLEL 144 +L + Sbjct: 296 RGDIKLTQLAM 306 >gi|149007639|ref|ZP_01831256.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pneumoniae SP18-BS74] gi|307127690|ref|YP_003879721.1| metal-dependent hydrolase [Streptococcus pneumoniae 670-6B] gi|147760794|gb|EDK67765.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pneumoniae SP18-BS74] gi|306484752|gb|ADM91621.1| metal-dependent hydrolase [Streptococcus pneumoniae 670-6B] gi|332077175|gb|EGI87637.1| endonuclease/Exonuclease/phosphatase family protein [Streptococcus pneumoniae GA17545] Length = 271 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 29/264 (10%), Positives = 68/264 (25%), Gaps = 14/264 (5%) Query: 4 VTVATWNVNSI--RARIHNL---AAWIKENNPDIICLQETK-------TEDKNFPFETLQ 51 + T N +S + I E + D+IC QE E + Sbjct: 1 MKFLTLNTHSWMEKEAEEKFQILLEDILEKDYDLICFQEINQEMTSSEVEVNDLYQALPA 60 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 + H + + + K + G D + I + I + + + ++ Sbjct: 61 AEPIHQDHYVRLLVEKLLEQGKNYYWTWAYNHIGYDRYHEGVAILSKTPIEAREILVSDV 120 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 P + + K + ++ ++ + Sbjct: 121 DDPTDYHTRRVALAETVVDGKELAVASVHLSWWDKGFQEEWARFEAVLKKLNKPLLLAGD 180 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 + + DA + Y+ + +RID++ + E Sbjct: 181 FNNPAGQEGYQAILASPLDLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTTKE 240 Query: 232 ATSLLHSARIDTKPRGWTKPSDHT 255 + + + + SDH Sbjct: 241 LA--VENLHVVFDGNKSPQVSDHY 262 >gi|46127109|ref|XP_388108.1| hypothetical protein FG07932.1 [Gibberella zeae PH-1] Length = 309 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 25/239 (10%), Positives = 67/239 (28%), Gaps = 9/239 (3%) Query: 33 ICLQE-TKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQ 91 +C+QE T + ++ + +Y+ + + + + + L Sbjct: 68 VCMQEATYPQIQDLQEDLGDEWDYYGVGRKGGNRGEFSPIFYRPSVWNMEDSKTYWLSST 127 Query: 92 ARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFA 151 + + + H + Y + ++ + A Sbjct: 128 PHKVGSRGWDAAFPRIVTVARFQHISTGNRLVY---MCTHFDHKGKTARENSAKLISATA 184 Query: 152 GDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYY 211 +++ + N + + + ++ + Y+ Y Sbjct: 185 EEWSSYGFDNVPVFIGGDLNSSPDEPAYKHLASAMNDVKSIIPLAKRFGHS-SYT---YT 240 Query: 212 ADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR-GWTKPSDHTPVIVSLDIPEPRKK 269 + S + + +DHI + + S + SDH PV+V L + +K Sbjct: 241 GFTVSPSDDMDLDHIFVKDTSGLQFKSFAVLNNLYEDGVFISDHRPVVVDLRLNHVSRK 299 >gi|307702031|ref|ZP_07639039.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus mitis NCTC 12261] gi|307616676|gb|EFN95865.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus mitis NCTC 12261] Length = 271 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 29/272 (10%), Positives = 74/272 (27%), Gaps = 14/272 (5%) Query: 4 VTVATWNVNSI--RARIHNLAAWIKEN---NPDIICLQETK-------TEDKNFPFETLQ 51 + T N +S + +++ + D+IC QE E +F Sbjct: 1 MKFLTLNTHSWMEKEAEEKFQLLLEDILDKDYDLICFQEINQEITSLEVEVNDFYQALPA 60 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 + H + + ++ K + G D + I + I + + + ++ Sbjct: 61 AEPIHQDHYVRLLVEKLSEQGKNYYWTWAYNHIGYDRYHEGVAILSKTPIEAREILVSDV 120 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 P + + + ++ ++ + Sbjct: 121 DDPTDYHTRRVALAETVVDGNELAVASVHLSWWDKGFQEEWARIEAVLKELNKPLLLAGD 180 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 + +G DA + Y+ + +RID++ + E Sbjct: 181 FNNPAGQEGYQAILASPLGLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTTKE 240 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + + + + SDH + L+ Sbjct: 241 LA--VENLHVVFDGNKSPQVSDHYGLNAILNW 270 >gi|265750587|ref|ZP_06086650.1| predicted protein [Bacteroides sp. 3_1_33FAA] gi|263237483|gb|EEZ22933.1| predicted protein [Bacteroides sp. 3_1_33FAA] Length = 334 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 40/257 (15%), Positives = 76/257 (29%), Gaps = 37/257 (14%) Query: 4 VTVATWNVNSIRARIHNL---AAWIKENNPDIICLQE---TKTEDKNFPFETLQSLNYHI 57 + + WN R L A I+ P I+CLQE T + Y I Sbjct: 96 LKLVCWNTEGFRLNKDTLTKAAHSIRVLQPGIVCLQERPHTNLLAWDTIRAAFPDYPYCI 155 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 + +A+ S++ + + + + ++A + QT R+ N++L Sbjct: 156 INSREDEVLNLAVFSRWPIGNVQEYYF---PNSYNKILQADIQMTGQTFRLFNVHLQTTG 212 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 S + + +R + + + L+ C + + Sbjct: 213 MNES----YSMKDRFQAMRHHTVQRNRQADLLTKAIAESPYPVIVCGDFNDTPASYAYRK 268 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 R G T + Y W + +RID+ SP Sbjct: 269 ISRLLQDCFLQAGQTWS--------GSYQCW----GGF-----LRIDYTFCSPAF----- 306 Query: 238 SARIDTKPRGWTKPSDH 254 +++ SDH Sbjct: 307 --QVNRYLLISNPWSDH 321 >gi|218200121|gb|EEC82548.1| hypothetical protein OsI_27091 [Oryza sativa Indica Group] Length = 486 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 39/307 (12%), Positives = 86/307 (28%), Gaps = 53/307 (17%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDK---NFPFETLQSLNY-HIETCGQKSYNGVAILS 72 R ++ ++E DII LQ + E++ + E + L ++ G A+LS Sbjct: 172 RRRSVEEVLREVGADIIGLQNVRAEEERGMSPLSELAEGLGMRYVFAESWAPEYGDAVLS 231 Query: 73 KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIK 132 ++ I D + + R+ + + N K Sbjct: 232 RWP---IKRWKSQRVADQSDFRCSKVRYVRAKNFRVESKHGLILNVDNHLSDRSKKCLYF 288 Query: 133 RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL------ 186 +E+ +++ H + + + +A Sbjct: 289 EMKNVLRATIEVPRAGEV--NFHCTHLDHLDESWRMKQMNAILRSSDGPHILTGGLNALD 346 Query: 187 ---QNMGFTDAIRATHDTHHLYS-------------FWDYYADSWSK------------- 217 + I ++ + + D A ++ Sbjct: 347 GTDYSDERWADIVKYYEEIGKPTPKAEVMKYLKGKQYVD--AKDFAGECEAVVVVAKGQD 404 Query: 218 -----NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQD 272 G R+D+I+ SP + SDH V V + I + ++ ++ Sbjct: 405 VQGTCKYGTRVDYILASPNSPYKFVPGS--YTVISSKGTSDHHIVKVDVTIQDKKETDEE 462 Query: 273 STSQNMK 279 S +Q + Sbjct: 463 SGNQRQR 469 >gi|148997164|ref|ZP_01824818.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pneumoniae SP11-BS70] gi|168575419|ref|ZP_02721355.1| metal-dependent hydrolase [Streptococcus pneumoniae MLV-016] gi|225860733|ref|YP_002742242.1| metal-dependent hydrolase [Streptococcus pneumoniae Taiwan19F-14] gi|307067363|ref|YP_003876329.1| metal-dependent hydrolase [Streptococcus pneumoniae AP200] gi|147756864|gb|EDK63904.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pneumoniae SP11-BS70] gi|183578405|gb|EDT98933.1| metal-dependent hydrolase [Streptococcus pneumoniae MLV-016] gi|225726547|gb|ACO22398.1| metal-dependent hydrolase [Streptococcus pneumoniae Taiwan19F-14] gi|306408900|gb|ADM84327.1| Metal-dependent hydrolase [Streptococcus pneumoniae AP200] gi|327390116|gb|EGE88459.1| endonuclease/Exonuclease/phosphatase family protein [Streptococcus pneumoniae GA04375] Length = 271 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 30/264 (11%), Positives = 69/264 (26%), Gaps = 14/264 (5%) Query: 4 VTVATWNVNSI--RARIHNL---AAWIKENNPDIICLQETK-------TEDKNFPFETLQ 51 + T N +S + I E + D+IC QE E + Sbjct: 1 MKFLTLNTHSWMEKEAEEKFQILLEDILEKDYDLICFQEINQEMTSSEVEVNDLYQALPA 60 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 + H + + + K + G D + I + I + + + ++ Sbjct: 61 AEPIHQDHYVRLLVEKLLEQGKNYYWTWAYNHIGYDRYHEGVAILSKTPIEAREILVSDV 120 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 P + + K + ++ ++ + Sbjct: 121 DDPTDYHTRRVALAETVVDGKELAVASVHLSWWDKGFQEEWARFEAVLKKLNKPLLLAGD 180 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 + +G DA + Y+ + +RID++ + E Sbjct: 181 FNNPAGQEGYQAILASPLGLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTTKE 240 Query: 232 ATSLLHSARIDTKPRGWTKPSDHT 255 + + + + SDH Sbjct: 241 LA--VENLHVVFDGNKSPQVSDHY 262 >gi|150377262|ref|YP_001313857.1| endonuclease/exonuclease/phosphatase [Sinorhizobium medicae WSM419] gi|150031809|gb|ABR63924.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium medicae WSM419] Length = 268 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 33/277 (11%), Positives = 76/277 (27%), Gaps = 29/277 (10%) Query: 4 VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQE-TKTE----------DKNFPFETLQ 51 + + + N RIHN L ++ DI+CLQE +T D + Sbjct: 1 MRILSLNAWG--GRIHNPLLKYLGSTKADILCLQEVVRTSGQPHGWLTYRDGDLRLPQRS 58 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 +L + ++ + A F+ ++ + L + Sbjct: 59 NL-FDEIRALLPAHRAQFFPVARGLLHDDYGREIWSEFGLATFVRESYATIGEALGFVHG 117 Query: 112 YLPHGNPITSTKYDDKIS---WIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY---- 164 + + + + +A+ Sbjct: 118 AFTPDSWGEHPRARNAHCVRVFDPDSGLYATIAQMHGLRDPAGKGDTPARAEQSMRLVKL 177 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRID 224 +W D + + + A D + D S+ + +G D Sbjct: 178 IESVWPGDERLVVCGDFNLLPQSSTFARLATLGLSDLVTGRGYTDTRT-SFYEKEGRFAD 236 Query: 225 HIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +++++ + + P + SDH P+++ L Sbjct: 237 YMLVNDRVD--VVGFEVVADP----EVSDHRPLLLKL 267 >gi|298674416|ref|YP_003726166.1| deoxyribonuclease I [Methanohalobium evestigatum Z-7303] gi|298287404|gb|ADI73370.1| Deoxyribonuclease I [Methanohalobium evestigatum Z-7303] Length = 447 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 39/263 (14%), Positives = 76/263 (28%), Gaps = 38/263 (14%) Query: 29 NPDIICLQETKTEDKN-FP--FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPG 85 N DII +QE + + +N P E + +Y+ + + +Y I + Sbjct: 92 NYDIIAIQEIRDKSENSLPQLVELVNEGDYNYDFVMSERLGRTVSKEQYAYIYNTATVDI 151 Query: 86 DDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELE 145 + E T + Q I + +GN + A + Sbjct: 152 SNNPHTYPEPEGTDPFHRQP-YIASFEAVNGNFDATFITVHTDPDEATEEINALDSVVEY 210 Query: 146 EPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY 205 ++ + + I + ++ D T+ + + + T Y Sbjct: 211 THEKYSEERDFIVMGDLNADGSYFDEDLDSTMHNDYYYWCIGDD------IDTTTGSTDY 264 Query: 206 SFWDYYADSWSKNKGIRIDHIMLS-PEATSLLHSARIDT-KPRGWTKP------SDHTPV 257 ++ D I+++ P A I + K SDH PV Sbjct: 265 TY----------------DRIIITEPAMEDFTDDAHIYRYDDKYDLKHDETMDVSDHYPV 308 Query: 258 IVSLDIPEPRKKQQDSTSQNMKP 280 + K D+ + N P Sbjct: 309 YATF----WTNKDDDNITSNYTP 327 >gi|330831230|ref|YP_004394182.1| putative phospholipase C [Aeromonas veronii B565] gi|328806366|gb|AEB51565.1| Putative phospholipase C [Aeromonas veronii B565] Length = 438 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 40/278 (14%), Positives = 83/278 (29%), Gaps = 43/278 (15%) Query: 4 VTVATWNVN-------SIRARIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNY 55 + VA++NV SI R+ L ++K + + LQE + F + Y Sbjct: 174 LKVASYNVWALPVIASSIGERLTLLPDYLKGYDA--LLLQEVFDGRREGFLQALAKEYPY 231 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + + N + ++ + Q + + T T + + Sbjct: 232 QTKVLDKPGIN------VHDGGVVIVSRYPIVREAQLVYPQCTGTDCFADKGVMYAEVIK 285 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 G + + ++++ + A I Y N F Sbjct: 286 GG-KAWHLFATHTASFDTDEARKLRQIQFGQIRSLAASLKIPATDTVIYGGDFNVNKRKF 344 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYS--FWDYYADSWS-------KNKGIRIDHI 226 + + A + Y+ +D + ++ N +D++ Sbjct: 345 ADDY---------ANMLANLNAHEPAYGGYTEATFDPRINPYAGGPLSGGANVEY-LDYL 394 Query: 227 MLSP---EATSLLHSARIDTKPRGWTKP----SDHTPV 257 ++S A+ L++ I G P SDH PV Sbjct: 395 VVSREYGNASHNLNTVWIPRSSDGSLWPASNLSDHFPV 432 >gi|317156331|ref|XP_003190713.1| reverse transcriptase [Aspergillus oryzae RIB40] gi|317159444|ref|XP_003191071.1| reverse transcriptase [Aspergillus oryzae RIB40] Length = 1679 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 14/42 (33%), Gaps = 4/42 (9%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 ID ++ S + I G SDH + D P Sbjct: 632 IDLVLASENLADSVIKCAIL----GTEHGSDHCAIETVFDAP 669 >gi|317156047|ref|XP_001825109.2| reverse transcriptase [Aspergillus oryzae RIB40] Length = 1779 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 14/42 (33%), Gaps = 4/42 (9%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 ID ++ S + I G SDH + D P Sbjct: 732 IDLVLASENLADSVIKCAIL----GTEHGSDHCAIETVFDAP 769 >gi|317148708|ref|XP_003190229.1| reverse transcriptase [Aspergillus oryzae RIB40] Length = 1646 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 14/42 (33%), Gaps = 4/42 (9%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 ID ++ S + I G SDH + D P Sbjct: 632 IDLVLASENLADSVIKCAIL----GTEHGSDHCAIETVFDAP 669 >gi|317147694|ref|XP_003189943.1| reverse transcriptase [Aspergillus oryzae RIB40] gi|317159428|ref|XP_001827307.2| reverse transcriptase [Aspergillus oryzae RIB40] gi|317159432|ref|XP_001827309.2| reverse transcriptase [Aspergillus oryzae RIB40] Length = 1676 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 14/42 (33%), Gaps = 4/42 (9%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 ID ++ S + I G SDH + D P Sbjct: 629 IDLVLASENLADSVIKCAIL----GTEHGSDHCAIETVFDAP 666 >gi|317141336|ref|XP_003189359.1| reverse transcriptase [Aspergillus oryzae RIB40] Length = 1679 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 14/42 (33%), Gaps = 4/42 (9%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 ID ++ S + I G SDH + D P Sbjct: 632 IDLVLASENLADSVIKCAIL----GTEHGSDHCAIETVFDAP 669 >gi|83773851|dbj|BAE63976.1| unnamed protein product [Aspergillus oryzae] gi|83776055|dbj|BAE66174.1| unnamed protein product [Aspergillus oryzae] gi|83776057|dbj|BAE66176.1| unnamed protein product [Aspergillus oryzae] Length = 1255 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 14/42 (33%), Gaps = 4/42 (9%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 ID ++ S + I G SDH + D P Sbjct: 208 IDLVLASENLADSVIKCAIL----GTEHGSDHCAIETVFDAP 245 >gi|149369902|ref|ZP_01889753.1| hypothetical protein SCB49_02474 [unidentified eubacterium SCB49] gi|149356393|gb|EDM44949.1| hypothetical protein SCB49_02474 [unidentified eubacterium SCB49] Length = 308 Score = 46.7 bits (109), Expect = 0.004, Method: Composition-based stats. Identities = 35/278 (12%), Positives = 73/278 (26%), Gaps = 50/278 (17%) Query: 6 VATWNVNSIR--------ARIHNLAAWIKENNPDIICLQET------------KTEDKNF 45 + +WN IR I +A +K + DI+ +QE K Sbjct: 60 IISWN---IRDFGQSKNDTEIKAIATIVK--DFDIVLIQEVVAKHPGGAQAVAKL-ADQL 113 Query: 46 PFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT 105 +Y I + ++ Y L G + Sbjct: 114 NR-MGSKWDYSISDPTKSPSAYMSERYAYLWKTARVSLKGKPFLDKELSSLVYREPYIAH 172 Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165 P ++ D + + + ++ GD+N+ + Sbjct: 173 FLFKGTSKPIAVINYHSRKHDDHPENEIQHFLDYNKRLKTDNILLCGDFNLNEAHPVWNS 232 Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225 + K ++ + + H ++Y + D Sbjct: 233 FYDNGYKNAISNTPTTLKMKCKDGNYLN-----HSIDNMY---------------WQGDF 272 Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + S + + TK R + SDH PV ++ ++ Sbjct: 273 TITSAGSLDFIQKCENLTKAR---QLSDHLPVSINFNL 307 >gi|148985891|ref|ZP_01818985.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pneumoniae SP3-BS71] gi|147922037|gb|EDK73161.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pneumoniae SP3-BS71] gi|301799776|emb|CBW32345.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pneumoniae OXC141] Length = 271 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 30/264 (11%), Positives = 70/264 (26%), Gaps = 14/264 (5%) Query: 4 VTVATWNVNSI--RARIHNL---AAWIKENNPDIICLQETK-------TEDKNFPFETLQ 51 + T N +S + I E + D+IC QE E + Sbjct: 1 MKFLTLNTHSWMEKEAEEKFQILLEDILEKDYDLICFQEINQEMTSSEVEVNDLYQALPA 60 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 + H + + ++ K + G D + I + I + + + ++ Sbjct: 61 AEPIHQDHYVRLLVEKLSEQGKNYYWTWAYNHIGYDRYHEGVAILSKTPIEAREILVSDV 120 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 P + + K + ++ ++ + Sbjct: 121 DDPTDYHTRRVALAETVVDGKELAVASVHLSWWDKGFQEEWARFEAVLKKLNKPLLLAGD 180 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 + +G DA + Y+ + +RID++ + E Sbjct: 181 FNNPAGQEGYQAILASPLGLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTTKE 240 Query: 232 ATSLLHSARIDTKPRGWTKPSDHT 255 + + + + SDH Sbjct: 241 LA--VENLHVVFDGNKSPQVSDHY 262 >gi|308484753|ref|XP_003104576.1| hypothetical protein CRE_23497 [Caenorhabditis remanei] gi|308257776|gb|EFP01729.1| hypothetical protein CRE_23497 [Caenorhabditis remanei] Length = 968 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 43/280 (15%), Positives = 89/280 (31%), Gaps = 25/280 (8%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENN---PDIICLQETKTEDKNFPFETLQSLNYHIETC 60 + + T+N S+ A + LA ++E N DII L ETK + Sbjct: 21 LRICTFNCRSV-ATDNRLAELLEETNRIKYDIIGLSETKRSAE-VHMTNRDGTG---VIL 75 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 G+++ + V+ + + + + V R T +N I Y P + Sbjct: 76 GKRNDSSVSGGVGFIINKSLMPKIKEIKIVSHRIGYLTLQVNKNQYTIIQGYAPTADYEE 135 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + + + S+ + + + + ND+ L Sbjct: 136 EEHSNFYENLEDVYKSCKSRYKMVIGDFNARIGERKGNEVFIGPHSMENRNDSGERL--- 192 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + N F + TH +++ + +DHI+ + + Sbjct: 193 -ATFCEVNKVFHMNSQFIKPTHRRWTYISPDKQHRHE-----LDHILANG---KYITDVS 243 Query: 241 IDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 + +T SDH + ++ I + K + + KP Sbjct: 244 V---VPSFTNGSDHRMLRANVHINAKQAKFEQV--KRRKP 278 >gi|313625229|gb|EFR95070.1| endonuclease/exonuclease/phosphatase family protein [Listeria innocua FSL J1-023] Length = 256 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 2/49 (4%) Query: 215 WSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +N+ +ID+I +S E + S + T SDH PV +L+ Sbjct: 209 RPENELEKIDYIFVSKEL--RVCSYKTITDQVDGCSASDHFPVTATLEW 255 >gi|241626053|ref|XP_002409605.1| conserved hypothetical protein [Ixodes scapularis] gi|215503194|gb|EEC12688.1| conserved hypothetical protein [Ixodes scapularis] Length = 383 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 24/54 (44%), Gaps = 10/54 (18%) Query: 3 VVTVATWNVNSIR-----ARIHNLAAWIKENNPDIICLQE-----TKTEDKNFP 46 + TWN++ I R + + I+ + D++ LQE K +++ P Sbjct: 133 TLKFITWNIDGIDDKNLLLRTKAVCSIIESSGIDVVFLQEVVPTSVKVMEQSLP 186 >gi|87116463|dbj|BAE79384.1| unnamed protein product [Ipomoea batatas] Length = 1898 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 37/285 (12%), Positives = 83/285 (29%), Gaps = 46/285 (16%) Query: 3 VVTVATWNVNSI-RARIHNLA-AWIKENNPDIICLQETKTE--DKNFPFETLQSLNYHIE 58 ++ + +WN I +R+ + D +CL E ++ +K + L H Sbjct: 532 LMRILSWNCRGIANSRVRRFVKDLLSTTKADALCLLEIRSSKAEKMIALASRLGLTNHFI 591 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 G+ +L K V + A I +R Sbjct: 592 VNPLGFAGGLLLLWKPALNLSVISHNSQAIHTLASHRLGNCFITFAYIR----------- 640 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + + + ++ P + GD N I + + + Sbjct: 641 ------PNTFAKCGFWEYCKQLANSIQSPWMVVGDLNDIATSDEQWGSSSLNYTSLQNFV 694 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM--LSPEATSLL 236 S L + G + +++ + + + + R+D ++ +S + T Sbjct: 695 DAYSDCGLLDPGSSGP---------NFTWCRFIGNRVVQRR--RLDRVLWNVSAQLTFPE 743 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 + SDH P++ + E S ++P+ Sbjct: 744 AKVSVLP-----RLCSDHNPILF---LDEAGNPPDRS----LRPV 776 >gi|16799425|ref|NP_469693.1| hypothetical protein lin0348 [Listeria innocua Clip11262] gi|16412777|emb|CAC95581.1| lin0348 [Listeria innocua Clip11262] Length = 257 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 2/49 (4%) Query: 215 WSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +N+ +ID+I +S E +HS + T SDH PV +L+ Sbjct: 210 RPENELEKIDYIFVSKEF--RVHSYKTITDQVDGCSASDHFPVTATLEW 256 >gi|212547169|ref|XP_002153737.1| reverse transcriptase, putative [Penicillium marneffei ATCC 18224] gi|210064393|gb|EEA18490.1| reverse transcriptase, putative [Penicillium marneffei ATCC 18224] Length = 1703 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 20/58 (34%), Gaps = 4/58 (6%) Query: 209 DYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEP 266 + + ID ++ S T + I G SDH + LD+P P Sbjct: 642 TWQGRGQDGDYESTIDLVLASENLTDSMVKCAIH----GTEHGSDHRAIETVLDVPRP 695 >gi|126699766|ref|YP_001088663.1| putative endonuclease/exonuclease/phosphatase [Clostridium difficile 630] gi|254975745|ref|ZP_05272217.1| putative endonuclease/exonuclease/phosphatase [Clostridium difficile QCD-66c26] gi|255093132|ref|ZP_05322610.1| putative endonuclease/exonuclease/phosphatase [Clostridium difficile CIP 107932] gi|255307161|ref|ZP_05351332.1| putative endonuclease/exonuclease/phosphatase [Clostridium difficile ATCC 43255] gi|255314874|ref|ZP_05356457.1| putative endonuclease/exonuclease/phosphatase [Clostridium difficile QCD-76w55] gi|255517548|ref|ZP_05385224.1| putative endonuclease/exonuclease/phosphatase [Clostridium difficile QCD-97b34] gi|255650659|ref|ZP_05397561.1| putative endonuclease/exonuclease/phosphatase [Clostridium difficile QCD-37x79] gi|260683749|ref|YP_003215034.1| putative endonuclease/exonuclease/phosphatase [Clostridium difficile CD196] gi|260687409|ref|YP_003218543.1| putative endonuclease/exonuclease/phosphatase [Clostridium difficile R20291] gi|306520587|ref|ZP_07406934.1| putative endonuclease/exonuclease/phosphatase [Clostridium difficile QCD-32g58] gi|115251203|emb|CAJ69034.1| putative endonuclease/exonuclease/phosphatase [Clostridium difficile] gi|260209912|emb|CBA63862.1| putative endonuclease/exonuclease/phosphatase [Clostridium difficile CD196] gi|260213426|emb|CBE05082.1| putative endonuclease/exonuclease/phosphatase [Clostridium difficile R20291] Length = 209 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 9/42 (21%) Query: 4 VTVATWNV-------NSIRARIHNLAAWIKENNPDIICLQET 38 + + T+N+ N R + + ++K+ + D+ICLQE Sbjct: 1 MKIVTYNIHKGMDSNN--RLTLTKMGLYLKQLDCDVICLQEV 40 >gi|77917626|ref|YP_355441.1| hypothetical protein Pcar_0008 [Pelobacter carbinolicus DSM 2380] gi|77543709|gb|ABA87271.1| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380] Length = 244 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 35/277 (12%), Positives = 78/277 (28%), Gaps = 61/277 (22%) Query: 1 MSVVTVATWNVNSIR--------ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52 M + + T+N++ R ARI I PD++ LQE + + Sbjct: 1 MYTIRIMTYNIHGCRGTDGRTDPARI---LEVISRAGPDMVALQEV---AGSLDNDQAAW 54 Query: 53 LNYHIETCGQKSYN--GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 L + + G A LS Y + + A A ++ +R+ Sbjct: 55 LGQRLAMNYYGPDSPGGNAFLSYYPMRAMRYLDLEGGSCLCADINIAGRCLHIFNIRLHE 114 Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170 + + + + P++ GD+ P Sbjct: 115 HF----------RQRRRQWVRLFDPQDGVGSHSTGCPVMLLGDFGDGPW----------- 153 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230 + + + + ++ ++ + D L Sbjct: 154 --SLRHGSIAPALRLAKSPFWSSTFPSWLPLCSR-------------------DRAYLGG 192 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPR 267 + + +RI + S H P++ ++ + +PR Sbjct: 193 QL--RIVDSRIYRYATAR-RASTHLPLLFTVRVADPR 226 >gi|15902713|ref|NP_358263.1| hypothetical protein spr0669 [Streptococcus pneumoniae R6] gi|116516071|ref|YP_816156.1| hypothetical protein SPD_0662 [Streptococcus pneumoniae D39] gi|303255826|ref|ZP_07341867.1| hypothetical protein CGSSpBS455_10054 [Streptococcus pneumoniae BS455] gi|303266291|ref|ZP_07352182.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pneumoniae BS457] gi|15458256|gb|AAK99473.1| Hypothetical protein spr0669 [Streptococcus pneumoniae R6] gi|116076647|gb|ABJ54367.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pneumoniae D39] gi|301801606|emb|CBW34304.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pneumoniae INV200] gi|302597210|gb|EFL64315.1| hypothetical protein CGSSpBS455_10054 [Streptococcus pneumoniae BS455] gi|302644221|gb|EFL74477.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pneumoniae BS457] Length = 271 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 30/264 (11%), Positives = 71/264 (26%), Gaps = 14/264 (5%) Query: 4 VTVATWNVNSI--RARIHNL---AAWIKENNPDIICLQETK-------TEDKNFPFETLQ 51 + T N +S + I E + D+IC QE E + Sbjct: 1 MKFLTLNTHSWMEKEAEEKFQILLEDILEKDYDLICFQEINQEMTSSEVEVNDLYQALPA 60 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 + H + + ++ K + G D + I + I + + + ++ Sbjct: 61 AEPIHQDHYVRLLVEKLSEQGKNYYWTWAYNHIGYDRYHEGVAILSKTPIEAREILVSDV 120 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 P + + K + ++ + ++ + Sbjct: 121 DDPTDYHTRRVALAETVVDGKELAVASVHLSWWDKGFQEEWARFEVVLKKLNKPLLLAGD 180 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 + +G DA + Y+ + +RID++ + E Sbjct: 181 FNNPAGQEGYQAILASPLGLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTTKE 240 Query: 232 ATSLLHSARIDTKPRGWTKPSDHT 255 + + + + SDH Sbjct: 241 LA--VENLHVVFDGNKSPQVSDHY 262 >gi|307325474|ref|ZP_07604676.1| Endonuclease/exonuclease/phosphatase [Streptomyces violaceusniger Tu 4113] gi|306888943|gb|EFN19927.1| Endonuclease/exonuclease/phosphatase [Streptomyces violaceusniger Tu 4113] Length = 286 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 38/278 (13%), Positives = 83/278 (29%), Gaps = 43/278 (15%) Query: 4 VTVATWNVN-SIRAR----IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 + VAT+N++ + +A I++ D+I LQE Y Sbjct: 41 LRVATFNIHHGAGPADVLDLERVARVIEDLRVDVIGLQEV--------------DRYWKR 86 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL------Y 112 + +A Q + + R T ++ +R Sbjct: 87 SGFVDQPAWLAERLGMQHAFGANLDLDPEEPGRPRRQYGTAVLSRGPIRSWTNTHLPLVP 146 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 + D + + ++ + E A ++ + + N Sbjct: 147 GHEQRGLLQATLDVRGTCVEFAVTHLQHDDNKERERQAARIVELLGSSPEHTVLVGDLNA 206 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 T E+ L ++ + +++ + + RID + S + Sbjct: 207 TPETPEIGILTGALDDVW------PRAGSGDGFTY-------DALDPHARIDFHLASRDL 253 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQ 270 L +A++ + SDH PV+ L +P R ++ Sbjct: 254 GPL--TAQV---VTADPEASDHLPVVSDLRMPVRRHRR 286 >gi|301793919|emb|CBW36315.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pneumoniae INV104] Length = 271 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 30/264 (11%), Positives = 69/264 (26%), Gaps = 14/264 (5%) Query: 4 VTVATWNVNSI--RARIHNL---AAWIKENNPDIICLQETK-------TEDKNFPFETLQ 51 + T N +S + I E + D+IC QE E + Sbjct: 1 MKFLTLNTHSWMEKEAEEKFQILLEDILEKDYDLICFQEINQEMTSSEVEVNDLYQALPA 60 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 + H + + + K + G D + I + I + + + ++ Sbjct: 61 AEPIHQDHYVRLLVEKLLEQGKNYYWTWAYNHIGYDRYHEGVAILSKTPIEAREILVSDV 120 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 P + + K + ++ ++ + Sbjct: 121 DDPTDYHTRRVALAETLVDGKELAVASVHLSWWDKGFQEEWARFEAVLKKLNKPLLLAGD 180 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 + +G DA + Y+ + +RID++ + E Sbjct: 181 FNNPAGQEGYQAILASPLGLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTTKE 240 Query: 232 ATSLLHSARIDTKPRGWTKPSDHT 255 + + + + SDH Sbjct: 241 LA--VENLHVVFDGNKSPQVSDHY 262 >gi|225432458|ref|XP_002277228.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 486 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 36/252 (14%), Positives = 72/252 (28%), Gaps = 27/252 (10%) Query: 13 SIRARIHNLAAWIKENNPDIICLQETKTEDKN--FPFETLQS-LNY-HIETCGQKSYNGV 68 +R+ ++ ++E N DI+ LQ+ K E++ P L L ++ G Sbjct: 208 GLRSS-RSILEVLREVNADILALQDVKAEEEKGMKPLSDLAGALGMKYVFAESWAPEFGN 266 Query: 69 AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKI 128 AILSK+ D D + + L H + K + I Sbjct: 267 AILSKWPIKRWKAQKIIDGEDFRNVLKATIDVPWAGEVNFHCTQLDHLDENWRMKQTNAI 326 Query: 129 SWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN 188 + L ++ + D ++V + + + Sbjct: 327 IQSSDCPHILAGGLNSLNGSDYSRER-----WMDIIKYYEEIGKPTPKVDVMEFLKGKEY 381 Query: 189 MGFTDAIRATHDTHHLYSFWDYYADSWSKN------KGIRIDHIMLSPEATSLLHSARID 242 + + + + +N G R+D+I+ S ++ Sbjct: 382 VDAKNFAGECEPVVII---------AKGQNVQGTCKYGTRVDYILASQDSPYKFVPRS-- 430 Query: 243 TKPRGWTKPSDH 254 SDH Sbjct: 431 YSVISSKGTSDH 442 >gi|160891511|ref|ZP_02072514.1| hypothetical protein BACUNI_03962 [Bacteroides uniformis ATCC 8492] gi|156858918|gb|EDO52349.1| hypothetical protein BACUNI_03962 [Bacteroides uniformis ATCC 8492] Length = 283 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 42/271 (15%), Positives = 78/271 (28%), Gaps = 30/271 (11%) Query: 6 VATWNV---------NSIRARIHNLAAWIKENNPDIICLQE-TKTEDKNFPFETLQS--L 53 V ++N+ N+ + R + A I PDII +QE K + + Q L Sbjct: 30 VMSFNIRLDHVADSMNNWKYRKDHAAQMIAYYAPDIIGMQEVVKNQLDDLKERLPQYTAL 89 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 +K + + + G + + + + + Sbjct: 90 GVGRADGEEKGEYCSLFYKTDRFELLKSGNFGLSETPDSIGKKGWDAACERIVT-WAVLK 148 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + ++ + + R S L LE+ AG + Sbjct: 149 DKVSGREIAAFNTHFDHVGKVARRESAVLILEKIKQMAG-------DLPVIVTRDFNGTV 201 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR-IDHIMLSPEA 232 + ++N T + W ++ + R ID I + A Sbjct: 202 DSEPVTVLTEGGMKNACVTAKVAYGPT-------WSFHDFGRIPVEKRRLIDFIFI-KGA 253 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + ID KP SDH PV+ L + Sbjct: 254 VEVERYRTIDDKP-DNGYLSDHAPVMAILKL 283 >gi|189242139|ref|XP_001814281.1| PREDICTED: similar to endonuclease and reverse transcriptase-like protein [Tribolium castaneum] Length = 1308 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 12/38 (31%), Positives = 18/38 (47%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTED 42 VA WN N + A L ++ DI+ + ETK + Sbjct: 451 RVAFWNANGLLAARDELEEFVDRLQLDIVLVCETKLQP 488 >gi|85375599|ref|YP_459661.1| metal-dependent hydrolase [Erythrobacter litoralis HTCC2594] gi|84788682|gb|ABC64864.1| metal-dependent hydrolase [Erythrobacter litoralis HTCC2594] Length = 233 Score = 46.3 bits (108), Expect = 0.004, Method: Composition-based stats. Identities = 36/275 (13%), Positives = 78/275 (28%), Gaps = 62/275 (22%) Query: 4 VTVATWNVNSIRA-----RIH--NLAAWIKENNPDIICLQETKTEDKN----FPFETLQS 52 +TVA++N++ +A R + + ++E + DII LQE P L Sbjct: 3 LTVASYNIH--KAVGTDRRRDPARIVSVLRELDADIIALQEADLRFGQRASVLPRALLDD 60 Query: 53 LNYHIETCGQKS----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108 + ++ ++G A+L + + + + A R+ Sbjct: 61 TPWKAVAVAKRPRSLGWHGNALLVRRGMEIVDSEALDLPMLEPRGAACADIANGKGAFRV 120 Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168 +L S + ++ + R + L + + Sbjct: 121 VGTHLDLSGVRRSDQIRTILAHLHRAHPDMPEILMGDFNQWSVRSGAMRVFD-------- 172 Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 + + SF + R+D I L Sbjct: 173 ------------------------EKWQVLSPGP---SFPSRRPIA-------RLDRIAL 198 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 SP+ + + + SDH P+ ++ + Sbjct: 199 SPQW--QVVGQGVHHSALSA-QASDHLPIWATVRL 230 >gi|326918342|ref|XP_003205448.1| PREDICTED: nocturnin-like [Meleagris gallopavo] Length = 379 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 35/264 (13%), Positives = 71/264 (26%), Gaps = 28/264 (10%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFP--FETLQSLNYHIETCGQKSYNGVAILSKYQPIE 78 + I PDI+CLQE D F L L Y + S +E Sbjct: 127 ILEEILAYKPDILCLQEV---DHYFDTFEPLLSRLGYQCTFFPKP-------WSPCLDVE 176 Query: 79 IVTHLPGDDLDVQARFIEATFT--INTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 G L E + I +++ + + ++ L+ Sbjct: 177 QNNGPDGCALFFLKERFELINSANIRLTAMKLKTNQVAIAQTLKCSETGRLFCIAVTHLK 236 Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN----MGFT 192 + N+ P+I D + + Sbjct: 237 ARTGWERFRSAQGCDLLQNLKSITQGAKIPLIICGDFNAEPTEEVYREFSNSSLNLNSAY 296 Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR------ 246 + + Y+ W ++ +D+I S A ++ + + T+ + Sbjct: 297 KLLSPDGQSEPPYTTWKIRPSGECRHT---LDYIWYSQHALNVNSALGLLTEEQIGPNRL 353 Query: 247 -GWTKPSDHTPVIVSLDIPEPRKK 269 + PSDH ++ + + Sbjct: 354 PSFNYPSDHLSLVCDFSFNQDPDR 377 >gi|261315552|ref|ZP_05954749.1| endonuclease/exonuclease/phosphatase [Brucella pinnipedialis M163/99/10] gi|261317992|ref|ZP_05957189.1| endonuclease/exonuclease/phosphatase [Brucella pinnipedialis B2/94] gi|261758554|ref|ZP_06002263.1| endonuclease/exonuclease/phosphatase family [Brucella sp. F5/99] gi|265989022|ref|ZP_06101579.1| endonuclease/exonuclease/phosphatase [Brucella pinnipedialis M292/94/1] gi|261297215|gb|EEY00712.1| endonuclease/exonuclease/phosphatase [Brucella pinnipedialis B2/94] gi|261304578|gb|EEY08075.1| endonuclease/exonuclease/phosphatase [Brucella pinnipedialis M163/99/10] gi|261738538|gb|EEY26534.1| endonuclease/exonuclease/phosphatase family [Brucella sp. F5/99] gi|264661219|gb|EEZ31480.1| endonuclease/exonuclease/phosphatase [Brucella pinnipedialis M292/94/1] Length = 217 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 27/141 (19%), Positives = 46/141 (32%), Gaps = 24/141 (17%) Query: 145 EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL 204 E + GD+N + + +E + L GF + Sbjct: 78 ERRWLICGDFNDYRERILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDR 137 Query: 205 YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA-------------------RIDTKP 245 ++ + ++D+IM SP + A +D P Sbjct: 138 WTLYHTRGPLER--HLCQLDYIMASPAFAAKNEHAVPDIIRRGQPWRTIFPPEQNVDRYP 195 Query: 246 R-GWTKP--SDHTPVIVSLDI 263 R GW +P SDH PV V+L++ Sbjct: 196 RTGWDRPKASDHCPVSVTLNM 216 >gi|291457367|ref|ZP_06596757.1| hypothetical protein BIFBRE_04610 [Bifidobacterium breve DSM 20213] gi|291381202|gb|EFE88720.1| hypothetical protein BIFBRE_04610 [Bifidobacterium breve DSM 20213] Length = 317 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 34/262 (12%), Positives = 69/262 (26%), Gaps = 45/262 (17%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTED--KNFPFETLQSLNYHIETCGQ 62 V T+NV +A ++ +++ +++ LQET T+D K ++ + Sbjct: 97 RVMTFNVYKGQADAQSIVNLVRDQRVEVLALQET-TDDFVKQLTEAGIEHYLPYAHVSSS 155 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 G + S ++V + + + G Sbjct: 156 DGVYGNGLWSAAPLKDVVDDEVNSSASFMPSGTVDMGGNQIRFVSVHTTAPVPG------ 209 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 W + R + IF GD+N + Sbjct: 210 ---YWGQWKRSLDELGLMRSHTDARYIFMGDFNATYDHTPFREFLGN------------- 253 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA-TSLLHSARI 241 +S+ + G IDH++L A+I Sbjct: 254 --------RFVDAAHQSGHGFTFSWPTNRSYL-PTFAG--IDHVVLDTGMTAGQCQIAKI 302 Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263 SDH ++ ++ + Sbjct: 303 --------AGSDHAALLATISV 316 >gi|153832474|ref|ZP_01985141.1| endonuclease/exonuclease/phosphatase [Vibrio harveyi HY01] gi|148871269|gb|EDL70141.1| endonuclease/exonuclease/phosphatase [Vibrio harveyi HY01] Length = 442 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 38/283 (13%), Positives = 82/283 (28%), Gaps = 43/283 (15%) Query: 4 VTVATWNVNSIRA-------RIHNLAAWIKENNPDIICLQETKTE-DKNFPFETLQSLNY 55 + + T+N+ ++ A R + ++K D++ LQE + + F E + Y Sbjct: 178 LKLVTYNIWALPAVASHIGDRYELIPEYVK--GYDVVALQEVFADGREAFLRELAEEYPY 235 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + + +N + + + I + Sbjct: 236 QTKMLDKDGFNIHDGGVTIVSRYPIVNQAQYVFPDCSSTDCFADKG------INYAEIIK 289 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 G + + + ++ + ++ A NI Y+ N Sbjct: 290 GGQA-YHVFATHAASSDTEIAREHRQRQFKQMRAMAKSLNIPANETVVYSGDFNVNK--- 345 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYS--FWDYYADSWS-------KNKGIRIDHI 226 + A + Y+ +D ++++ N +D++ Sbjct: 346 ------LKFPGDYQQMIANLSAVEPEYSGYTASTFDPRINNFAGKALSGGDNVEY-LDYV 398 Query: 227 MLSPEA-TSLLHSARID----TKPRGWTK--PSDHTPVIVSLD 262 M+S E + R+D T W SDH PV L Sbjct: 399 MVSSEYGAKSFNDNRVDVPRSTAASLWKHYNLSDHFPVSTVLK 441 >gi|103486507|ref|YP_616068.1| endonuclease/exonuclease/phosphatase [Sphingopyxis alaskensis RB2256] gi|98976584|gb|ABF52735.1| Endonuclease/exonuclease/phosphatase [Sphingopyxis alaskensis RB2256] Length = 289 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 33/266 (12%), Positives = 71/266 (26%), Gaps = 21/266 (7%) Query: 7 ATWNV------NSIRARIHN---LAAWIKENNPDIICLQETKTEDKN-FPFETLQSLNYH 56 T+N+ + A H + + +PD+I +QE K + + + Sbjct: 28 MTYNIRLDLASDGDNAWPHRRGAVTNLVGYYSPDLIGMQEVLLHQKQAIEADLPRYIFVG 87 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 + K + L + + L + + Sbjct: 88 VARDDGKEQGEFSPLGFRRDRFTLVASGTFWLSPTPDAPSRGWDAALPRIASWARLKDRS 147 Query: 117 NPITSTKYD-DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + +T + K ++++L ++ +DA Sbjct: 148 SRLTLLAVNTHFDHVGKEARLESARQLRRWIGANRRRGETVVLMGDFNSPVDSPPHDAIT 207 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 + + ++ +D +N IDHI ++ Sbjct: 208 DPAPGPAALH---DTLAISRTPHFGPLGTFTGFD-----IERNDPSPIDHIFVNDGTA-- 257 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 + T+ G PSDH PV+ L Sbjct: 258 VLRHATLTQQTGGKLPSDHYPVLADL 283 >gi|147845367|emb|CAN79050.1| hypothetical protein VITISV_004869 [Vitis vinifera] Length = 1429 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 22/40 (55%), Gaps = 2/40 (5%) Query: 4 VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTE 41 V + +WNV ++ + +I+ D++C+QETK + Sbjct: 434 VKILSWNVRGANDSSKRKVIKTFIRNQRVDLMCIQETKLQ 473 >gi|209560115|ref|YP_002286587.1| hypothetical protein Spy49_1635c [Streptococcus pyogenes NZ131] gi|209541316|gb|ACI61892.1| hypothetical protein Spy49_1635c [Streptococcus pyogenes NZ131] Length = 272 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 37/276 (13%), Positives = 86/276 (31%), Gaps = 20/276 (7%) Query: 3 VVTVATWNVNSIRAR--IHNLAAW---IKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57 + V T N +S + L A I DIICLQE ++ E L + Sbjct: 1 MTKVLTLNTHSWMQANTLKKLVALAEHILAEKYDIICLQEI---NQLIESELATDLPRYQ 57 Query: 58 E-----TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 + + + + I + + + + E ++ Q + + ++ Sbjct: 58 ALSGTPSIHKDHFALLLIHYLQKRGQHYYWSWAYNHIGYDIYQEGVAILSKQPIHVSDIL 117 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLI---FAGDYNIIPQPHDCYNPIIW 169 + + T + + + F G++ + + N + Sbjct: 118 VSAMDDETDYHTRRSLIAKTTLDGKEVAVVNVHLSWFDKGFLGEWEKLEKELLTLNCALL 177 Query: 170 ENDACFTLEVRQSFQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227 + +Q + + D+ + +S + +++DH+ Sbjct: 178 LMGDFNNPTDQDGYQVMMGSPLDLQDSHKVADHVFGDHSIVADIDGWQDNKEALKVDHVF 237 Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 S + + S++I + SDH + V+LD Sbjct: 238 TSKDFI--IRSSKITFEGGDAPVVSDHYGLEVTLDW 271 >gi|168209037|ref|ZP_02634662.1| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens B str. ATCC 3626] gi|170712739|gb|EDT24921.1| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens B str. ATCC 3626] Length = 263 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 37/269 (13%), Positives = 74/269 (27%), Gaps = 20/269 (7%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQE----TKTEDKNFPFETLQSLN 54 + + T N +S +I LA I E D+I LQE K L+ N Sbjct: 1 MKLLTLNCHSWLEEEQLYKIKYLAKTIVEEKYDVIALQEASQSIKAS---IKEGNLKEDN 57 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 Y + + +Y + +H+ D + + +N+++ I + Sbjct: 58 YGLILIEEIKK---LGGEEYHLVWDYSHIGYDIYEEGLCILTKHKVVNSESFYISKSHSK 114 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 + ++ + H + Sbjct: 115 TFWRSRKIVKATIDINNENIDFYSCHMGWWHDKEESFTFQVKNLIAHAKESKNRAFFMGD 174 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD--SWSKNKG-IRIDHIMLSPE 231 F + + I + S + W N G +RID I + Sbjct: 175 FNNNAFLKNEGYDFLKSNGLIDTYDLAENKDSGVTVNKNIAGWEDNTGELRIDIIFTNRN 234 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 ++ +R+ + SDH + + Sbjct: 235 I--KVYDSRVIFNGKNKEVVSDHFGLEIE 261 >gi|126433598|ref|YP_001069289.1| endonuclease/exonuclease/phosphatase [Mycobacterium sp. JLS] gi|126233398|gb|ABN96798.1| Endonuclease/exonuclease/phosphatase [Mycobacterium sp. JLS] Length = 255 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 33/266 (12%), Positives = 75/266 (28%), Gaps = 22/266 (8%) Query: 4 VTVATWNV-NSIRAR------IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56 + VAT+N+ + R+ + LA I+E + DI+ LQE L ++ Sbjct: 1 MRVATFNILHG-RSVHDGEVDVDRLAQSIRELDADIVALQEVDLHQPRSGTTDLTAVAAE 59 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT-LRIGNLYLPH 115 + + T + + F T +R+ + +P Sbjct: 60 AMHAVSHRFVAAIAGTPGATWMAATGREQPGTAAYGIALLSRFPAETWQVVRLPRIPVPF 119 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + ++ R + L + + +P + + + F Sbjct: 120 PMYLPGPNRVQIVNEEPRAAMVGTFDTPLGPLTVANTHLSFVPGWNRVQMRHLVRDLRGF 179 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 + +F +A +DH++ + + Sbjct: 180 KGPRMLLGDLNMSPPTPARWARMRSLGEGLTF-PAHAPDRQ------LDHVL-TDDPRLR 231 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 + + P SDH ++V + Sbjct: 232 VEKCSAVSLP-----ISDHRALVVDI 252 >gi|196013219|ref|XP_002116471.1| hypothetical protein TRIADDRAFT_30983 [Trichoplax adhaerens] gi|190581062|gb|EDV21141.1| hypothetical protein TRIADDRAFT_30983 [Trichoplax adhaerens] Length = 284 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 43/273 (15%), Positives = 77/273 (28%), Gaps = 20/273 (7%) Query: 17 RIHNLAAWIKENNPDIICLQETKTED--KNFPFETLQSLNYHIETCGQKSYNGVAILSKY 74 R LA +++++ DII LQE + + K +G I S++ Sbjct: 11 RFKYLAEALRQSDYDIIGLQEVWLIKNYEALKVALKAVFPHSHYFYSGKIGSGKCIFSRF 70 Query: 75 QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRF 134 + A + + + Sbjct: 71 PIVATSFTAYTLSGYPYALNHGDWLGKKGVGF-------CKIDVNGTILNVYVTHIHAEY 123 Query: 135 LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDA 194 R L I + + + +P+I D F E ++ DA Sbjct: 124 NRDNDVYLPHRVTEIV--QLSQLIRFTAGNSPVILIGDLNFEPEDIGYRFITTSLDLKDA 181 Query: 195 IRATHDTHHLYS--FWDYY----ADSW--SKNKGIRIDHIMLSPE-ATSLLHSARIDTKP 245 D LY+ DY +S+ + RID+I+ S + S + P Sbjct: 182 WLEAGDGVMLYTRNNIDYSDSLNTNSFTPANEIEKRIDYILYSGDHLKSQACQVTLGRIP 241 Query: 246 RGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278 SDH V + + R +Q+ + Sbjct: 242 DAAFNYSDHEGVEATFQLNARRLRQRQDMAGRF 274 >gi|159028078|emb|CAO87155.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 260 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 49/277 (17%), Positives = 80/277 (28%), Gaps = 33/277 (11%) Query: 4 VTV--ATWNV----------NSIRARIHNLAAWIKENNPDIICLQETKTE---DKNFPFE 48 + + ++N+ N R R +AA I +PDII QE + D + Sbjct: 1 MKLTAMSFNIRYDKPDPDERN-WRVRREAVAALIAHYSPDIIGTQEARANQLLDLHRLLP 59 Query: 49 TLQSLNYHIETCGQKSYNGVAIL-SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107 QSL G + + S+ + +EI + DV EA + + Sbjct: 60 KYQSLGSDRRGTGLDEHCAILYQPSRLKCLEIYEFWLSETPDVIGSITEAWGNPYPRMVT 119 Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167 G + K A E L DY + + + Sbjct: 120 GAKFRTLEGQTLQFYNTHLDYYSDKAKDLGAKCIQERFCQLDLTKDYLFLTGDFNVNSQR 179 Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227 + L+ + + + Y+ Y A ID I Sbjct: 180 LPRQILTQPLQSEIKLKDALADLELAEQMSFN----NYTDTPYLA----------IDTIY 225 Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 L ++D PSDH PVI + +P Sbjct: 226 YDSRL--QLDWVKVDPSRWLNLIPSDHYPVIAAFTLP 260 >gi|270296071|ref|ZP_06202271.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. D20] gi|270273475|gb|EFA19337.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. D20] Length = 267 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 42/265 (15%), Positives = 73/265 (27%), Gaps = 27/265 (10%) Query: 2 SVVTVATWNV------NSIRA---RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52 S +TV ++N+ + + A R IK++ PDI+ +QE D F Sbjct: 15 SQLTVISYNMRYGTAEDGVNAWEFRKPATIKMIKKHKPDILGVQE--ALDFQLAFILENC 72 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 NY G+ + + L + E + Sbjct: 73 TNYEAVGVGRIDGKHDGEHASIMYNKKKIELLEWGNFWLSSTPEIPSIGWDAACTRTATW 132 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 + T K+ + + R A + I + + P+I D Sbjct: 133 ALLKDKKTMEKFYYVNTHLDHVGRVARKEG-------LNLILEKIQKINPDNFPLILTGD 185 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 + + M D+ ++ W + ID+I Sbjct: 186 FNMEHTDSSIQKLNEKMIDARTSAKKTDSFGTFNGWGTRSSI--------IDYIYY-KGF 236 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPV 257 I K G T SDH P+ Sbjct: 237 KMCTEYVTIREKYAGKTFISDHYPI 261 >gi|171912039|ref|ZP_02927509.1| hypothetical protein VspiD_12705 [Verrucomicrobium spinosum DSM 4136] Length = 339 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 33/257 (12%), Positives = 65/257 (25%), Gaps = 35/257 (13%) Query: 21 LAAWIKENNPDIICLQET-------------KTEDKNFPFETLQSLNYHIETCGQKSYNG 67 L + PDI+ + E K D + P H E Sbjct: 80 LIEILATIKPDILGVCEIGDAEDLADLQARLKVRDIDLP---------HSEMGNGGDPTR 130 Query: 68 VAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDK 127 L PI + + I T+ + + + + Sbjct: 131 RLALLSRFPITSRNSQSELKYHIGDVILPMQRGILDATVALRPNFEVRFLGVHFKSQREV 190 Query: 128 ISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQ 187 ++ +R L P E+ L + Sbjct: 191 PGMDQKLMRRNEAHLLRRHIESILTT---EPATRLLAYGDFNESKHEAALVEIEGVP-GT 246 Query: 188 NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH--SARIDTKP 245 ++ D FWD + + R+D+ ++ S + + + P Sbjct: 247 DVSMMDVRLRDSRGETWTHFWD------AADHYSRLDYCFVNRALQSDIKKPESFVY-DP 299 Query: 246 RGWTKPSDHTPVIVSLD 262 + SDH P+++ +D Sbjct: 300 PNFYDASDHRPLVIKID 316 >gi|149031531|gb|EDL86498.1| similar to putative TRAF and TNF receptor associated protein, isoform CRA_c [Rattus norvegicus] Length = 366 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 42/280 (15%), Positives = 77/280 (27%), Gaps = 51/280 (18%) Query: 2 SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 S ++ TWN++ + RAR + + + +PD++ LQE P Sbjct: 118 STISFITWNIDGLDGCNLPERAR--GVCSCLALYSPDVVFLQEV------IPS------- 162 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 Y + + ++ + G I T + L N+ L Sbjct: 163 YCAYLRKRARTYNIITGNEEGYFTAILLKKGRVKFKSQEIIPFPNTKMMRNLLCVNVSLG 222 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 T + + + + + Q +I+ D Sbjct: 223 GNEFCLMTSHLESTRKHSAERINQLKTVFQKM------------QEATDSTTVIFAGDTN 270 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI--------DHI 226 + L + F H Y+ WD A N +RI D I Sbjct: 271 LRDQEVIKCGGLPDNVFDAWEFLGKPKHCRYT-WDTKA-----NDNLRIPAACKHRFDRI 324 Query: 227 MLSPE---ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 E + PSDH ++ +L++ Sbjct: 325 FFRAEEGHLIPQSLDLIGLERLDCGRFPSDHWGLLCTLNV 364 >gi|170085645|ref|XP_001874046.1| inositol phosphophingolipids phospholipase C [Laccaria bicolor S238N-H82] gi|164651598|gb|EDR15838.1| inositol phosphophingolipids phospholipase C [Laccaria bicolor S238N-H82] Length = 430 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 53/318 (16%), Positives = 92/318 (28%), Gaps = 46/318 (14%) Query: 2 SVVTVATWNVNSIR-------ARIHNLAAWIKENNPDIICLQET---------------K 39 S + + + N ++ RI +A ++ +++ DI+ LQE + Sbjct: 4 SEIRLLSLNCWGLKYVAKNRTERIQAIARFLADSDHDIVALQEIWVFADYEHVLESVSKR 63 Query: 40 TEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF 99 F + I T V S V A Sbjct: 64 LPHSKFFYSGALGAGLAIFTRFPIVTTSVNPYSLNGSPIDVAAGDWFVGKAAASVTILHP 123 Query: 100 TINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159 + + +L+ G ++ F + Q E +I GD+N IP Sbjct: 124 VLGHVQIFNTHLFAKGGEDGPEYNRAHRLVNAWEFAKLTRQAAERGRYVIALGDFNSIPP 183 Query: 160 PHDCYNPIIW---ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYS-FWDYYADS 214 + T + + + T D+ + YS Y A S Sbjct: 184 TLPMTVIRDHASLTDSWVVTHPNPDATSVTNALEAITKLGITADSPLNSYSAAKGYAAGS 243 Query: 215 WSKNKGIRIDHIM--------LSPEAT---SLLHSARI---DTKPRGWTKPSDHTPVIVS 260 W G R+D+++ SP T ++ D P SDH + + Sbjct: 244 W----GKRLDYVLYRQPERHQTSPGQTFPLLKAKECKVVLTDPVPGYNFSYSDHFGLDAT 299 Query: 261 LDIPEPRKKQQDSTSQNM 278 L I E Q S+ + Sbjct: 300 LHI-EASDVQNAEASKEL 316 >gi|53713044|ref|YP_099036.1| hypothetical protein BF1755 [Bacteroides fragilis YCH46] gi|52215909|dbj|BAD48502.1| conserved hypothetical protein [Bacteroides fragilis YCH46] Length = 287 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 37/284 (13%), Positives = 78/284 (27%), Gaps = 54/284 (19%) Query: 6 VATWNV------NSI---RARIHNLAAWIKENNPDIICLQET----------KTEDKNFP 46 V ++N+ +S+ R R +A I + DI+ QE + + Sbjct: 31 VMSFNIRYDNPEDSLDNWRYRKDRVANAIHFYDVDILGTQEVLHNQLEDLKLRLPEYGVV 90 Query: 47 ---FETLQSLNYHIETCGQKSYNGV-----AILSKYQPIEIVTHLPGDDLDVQARFIEAT 98 E + + +K V LS+ + G + + Sbjct: 91 GVGREDGKEKGEYSALWYKKDRFNVLDSGYFWLSETPEVAGSKGWDGACERIASWVKLQD 150 Query: 99 FTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP 158 + + + G + L P+I GD+N Sbjct: 151 KVSDKEYFALNTHLDHVGGMA--------RREGISLMLDRVNELSDGLPVIVTGDFNSEL 202 Query: 159 QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN 218 + + N E ++ ++ + + Y + Sbjct: 203 ESDVIKHVTDSAN-----PEHLTDARQASSIVYGPSWSFHDFGKIPY-------NKRPL- 249 Query: 219 KGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 ID++ + + I + SDHTPV+V+++ Sbjct: 250 ----IDYVFVRNGL--KVLRYGILAETENNGFLSDHTPVLVTVE 287 >gi|257452011|ref|ZP_05617310.1| Endonuclease/exonuclease/phosphatase [Fusobacterium sp. 3_1_5R] Length = 265 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 42/272 (15%), Positives = 80/272 (29%), Gaps = 17/272 (6%) Query: 4 VTVATWNVNSIRARIHN------LAAWIKENNPDIICLQET--KTEDKNFPFETLQSLNY 55 + + T NV+S LA I E D+I +QE K E + E + Sbjct: 1 MKLLTINVHSW-LEEKQEEKMELLAKVIAEKRYDVIAMQEVNQKIEARLLKGEIREDNFL 59 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLP--GDDLDVQARFIEATFTINTQTLRIGNLYL 113 + + Y + I + G L + +E T + + ++ Sbjct: 60 YQLCKKIEKYTEEKYEYHWSHSHIGFDIYEEGIALLTRHSILEKEDFYCTNSKTVYSISS 119 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 I + + K +E + + DA Sbjct: 120 RKIVKI-FLEIEGKEIEFYSCHMNLPNCIEENMEQNIQNILKHSSRNCLKILMGDFNTDA 178 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 Q + + D +Y + +S + R+D+I L+ + Sbjct: 179 FHDQSSYQKILEQGLFDSYTLSKKKDDGVTVYKNISGWENSVEEK---RLDYIFLTEQYE 235 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 + S+ + + + SDH + V L I E Sbjct: 236 --VESSYVIFNGKNYPCISDHNGLEVILKIKE 265 >gi|82701739|ref|YP_411305.1| endonuclease/exonuclease/phosphatase [Nitrosospira multiformis ATCC 25196] gi|82409804|gb|ABB73913.1| Endonuclease/exonuclease/phosphatase [Nitrosospira multiformis ATCC 25196] Length = 250 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 27/261 (10%), Positives = 62/261 (23%), Gaps = 27/261 (10%) Query: 1 MSVVTVATWNVN-SI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 ++ + +AT+N++ R +H L ++ N DII LQE + Sbjct: 2 LNKLHIATYNIHKGFSHFNRRVMVHQLRDSLRALNADIIFLQEV--------VGEHKGHG 53 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 E + S + + D+ + + + + Sbjct: 54 ARFENWPESPQYEFLADSIWTDFAYGKNAVYDEGHHGNAILSRYPILRWDNVDVSAHRFE 113 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 + + + + Sbjct: 114 SRGLLHCEIGIPQWRENLHCICVHLGLFKRGRSRQL--QLLEKHIEELVPQDAPLVIAGD 171 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 F + + L + + ++ R+D I + Sbjct: 172 FNDWREVASRILVQRLALAEVFELTEGRPARTYPSTLPL-------FRLDRIYVRGF--- 221 Query: 235 LLHSARIDTKPRGWTKPSDHT 255 + A++ W+K SDH Sbjct: 222 HIEKAQVHQGH-PWSKISDHA 241 >gi|313620750|gb|EFR92007.1| endonuclease/exonuclease/phosphatase family protein [Listeria innocua FSL S4-378] Length = 257 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 2/49 (4%) Query: 215 WSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +N+ +ID+I +S E +HS + T SDH PV +L+ Sbjct: 210 RPENELEKIDYIFVSKEF--RVHSYKTITDQVDGCSASDHFPVTATLEW 256 >gi|229820609|ref|YP_002882135.1| Endonuclease/exonuclease/phosphatase [Beutenbergia cavernae DSM 12333] gi|229566522|gb|ACQ80373.1| Endonuclease/exonuclease/phosphatase [Beutenbergia cavernae DSM 12333] Length = 382 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 24/61 (39%), Gaps = 19/61 (31%) Query: 222 RIDHIMLSPEATSLLHSARIDTK---------PRGWT----------KPSDHTPVIVSLD 262 R+D+I+LS + S R+ P W + SDH ++V LD Sbjct: 322 RLDYILLSRGLAARFTSGRVFRTGLWGTRVTRPTAWETYPEMLTGTHQASDHAALVVELD 381 Query: 263 I 263 I Sbjct: 382 I 382 >gi|83816161|ref|YP_446950.1| endonuclease/exonuclease/phosphatase family protein [Salinibacter ruber DSM 13855] gi|83757555|gb|ABC45668.1| endonuclease/exonuclease/phosphatase family [Salinibacter ruber DSM 13855] Length = 270 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 44/285 (15%), Positives = 78/285 (27%), Gaps = 37/285 (12%) Query: 7 ATWNV------NS-IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 T+NV +RA I+ +PD++ LQE + L+Y+ Sbjct: 1 MTYNVLYATPDTGTVRA--------IEAVDPDVVALQEI--SEPRL-RHIADELDYYFHH 49 Query: 60 CGQKSYN--GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 + N +LS+Y + L V A ++ L Sbjct: 50 SDEHEANEEDTGLLSRYPISRPTRYGALLYLTVDDPIRIANVHLSPYPYEPYALRDDEMT 109 Query: 118 PITSTKYDDK---ISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 P + K + E + + Sbjct: 110 PREAVAQARKTRSPEIKPVLDALSKSVQEDVPTFLMGDFNEPSHLDWTPAAAEAGLHLGL 169 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHL---YSFWDYYADSWSKNKGIRIDHIMLSPE 231 + + GF DA R H Y++ D RID I ++ Sbjct: 170 EVPWPT--SRAVTERGFRDAFRVAHPDEVKRPGYTWTTLTGD--PDEVHDRIDFIYVAGA 225 Query: 232 ATSLLHSARI-DTKPRGWTK-----PSDHTPVIVSLDI-PEPRKK 269 + S+ + + + PSDH V+ ++ + P P Sbjct: 226 SVSVETAYTVGLRDASPTDRSVSGYPSDHRSVVTTVSLAPSPSDP 270 >gi|313674251|ref|YP_004052247.1| endonuclease/exonuclease/phosphatase [Marivirga tractuosa DSM 4126] gi|312940949|gb|ADR20139.1| Endonuclease/exonuclease/phosphatase [Marivirga tractuosa DSM 4126] Length = 334 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 29/255 (11%), Positives = 71/255 (27%), Gaps = 19/255 (7%) Query: 22 AAWIKENNPDIICLQETKTEDK-NFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80 + + + D + LQE + +F + L SL H+ + V Y P Sbjct: 84 IDLLSDYDFDFMGLQEVDFQSSRSFNYNQLDSLGVHLNFH--QGAYSVNWDKSYVPFPYF 141 Query: 81 THLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQ 140 + + + + + L + + + + D + K L + Sbjct: 142 PIRNHFGRMYSGQAVLSKMQLLSNELTVFDKPINAPFYYNAFYIDRVMQINKIQLYSDTL 201 Query: 141 RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQ-----------NM 189 + F + + W L + + + Sbjct: 202 IVMNVHLEAFDRETRELQAEEVLVEFNKWSKKYPVILMGDFNSRPPFASEVLEEEKTIEI 261 Query: 190 GFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLLHSARIDTKPRGW 248 + + + Y + ++ + R+D++ + + S + + Sbjct: 262 FLEEPLIGEAISEERYLQNESQFFTFDTADPYERLDYVFYNKNKIRKIES-DVLREA--- 317 Query: 249 TKPSDHTPVIVSLDI 263 SDH PV ++ I Sbjct: 318 EDISDHLPVWMTFTI 332 >gi|301063079|ref|ZP_07203640.1| endonuclease/exonuclease/phosphatase family protein [delta proteobacterium NaphS2] gi|300442799|gb|EFK07003.1| endonuclease/exonuclease/phosphatase family protein [delta proteobacterium NaphS2] Length = 333 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 26/135 (19%), Positives = 44/135 (32%), Gaps = 19/135 (14%) Query: 1 MSV-VTVATWNVNSI-------------RARI-HNLAAWIKENNPDIICLQET---KTED 42 MS+ +T+ +WN+N I +ARI L +I + PD+I +QE K E+ Sbjct: 1 MSLHITIVSWNMNGISFLKSEPQKRGLLKARITRQLNDFIHVHRPDLIAIQEIVRYK-EN 59 Query: 43 KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN 102 Y ++ K++PI D Q + I Sbjct: 60 GAIQELVEPPDGYFYQSSISIDTARQNNPVKWEPIRQSGKWTSDAYLGQGNGLMWRGDIP 119 Query: 103 TQTLRIGNLYLPHGN 117 ++ Sbjct: 120 HCSIWDWKGEKAQRG 134 >gi|295444804|ref|NP_001128591.2| protein angel homolog 2 [Rattus norvegicus] gi|149041025|gb|EDL94982.1| angel homolog 2 (Drosophila) (predicted), isoform CRA_a [Rattus norvegicus] Length = 522 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 32/97 (32%), Gaps = 5/97 (5%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73 R N+ IK + D++CLQE ++ ++ E L+SL YH E + Sbjct: 178 RFPNILKEIKHFDADVLCLQEV--QEDHYGTEIRPSLESLGYHCEYKMKTGRKPDGCAIC 235 Query: 74 YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 ++ + + L + Sbjct: 236 FKHSKFSLLSVNPVEFCRRDIPLLDRDNIGLVLLLQP 272 >gi|296535528|ref|ZP_06897711.1| endonuclease/exonuclease/phosphatase [Roseomonas cervicalis ATCC 49957] gi|296264141|gb|EFH10583.1| endonuclease/exonuclease/phosphatase [Roseomonas cervicalis ATCC 49957] Length = 264 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 29/283 (10%), Positives = 59/283 (20%), Gaps = 45/283 (15%) Query: 3 VVTVATWNVN-SI----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57 ++ +WN++ I R + + I+ + PD++ +QE Sbjct: 2 ILRAMSWNIHAGIGGDGRYDLGRVLGLIRRHRPDLLAVQEI------------------- 42 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 + + + G L + Sbjct: 43 --------DSRPCGRSACAFDTLREAFGGHAIAAETMRGGEGAYGHMLLS--RWPFQEAD 92 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + + L G + + Sbjct: 93 THDLSVEGREPRQAIAARLRMPGGASLGVVAAHLGLRWRERGQQARRMAALVRGMPGPVV 152 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 + A+ + + +R+D I P LL Sbjct: 153 VMGDFNDWSWGGPVWRALAPLLPARTRHRTFPARLPL------LRLDEIFCRP--AQLLG 204 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 + +D SDH PV+ L + R P Sbjct: 205 RSWVDRDA---AIASDHLPVLAELHVGAARHAGPARRGGQEAP 244 >gi|255101285|ref|ZP_05330262.1| putative endonuclease/exonuclease/phosphatase [Clostridium difficile QCD-63q42] Length = 209 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 9/42 (21%) Query: 4 VTVATWNV-------NSIRARIHNLAAWIKENNPDIICLQET 38 + + T+N+ N R + + ++K+ + D+ICLQE Sbjct: 1 MKIVTYNIHKCMDSNN--RLTLTKMGLYLKQLDCDVICLQEV 40 >gi|317058560|ref|ZP_07923045.1| endonuclease/exonuclease/phosphatase [Fusobacterium sp. 3_1_5R] gi|313684236|gb|EFS21071.1| endonuclease/exonuclease/phosphatase [Fusobacterium sp. 3_1_5R] Length = 269 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 42/272 (15%), Positives = 80/272 (29%), Gaps = 17/272 (6%) Query: 4 VTVATWNVNSIRARIHN------LAAWIKENNPDIICLQET--KTEDKNFPFETLQSLNY 55 + + T NV+S LA I E D+I +QE K E + E + Sbjct: 5 MKLLTINVHSW-LEEKQEEKMELLAKVIAEKRYDVIAMQEVNQKIEARLLKGEIREDNFL 63 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLP--GDDLDVQARFIEATFTINTQTLRIGNLYL 113 + + Y + I + G L + +E T + + ++ Sbjct: 64 YQLCKKIEKYTEEKYEYHWSHSHIGFDIYEEGIALLTRHSILEKEDFYCTNSKTVYSISS 123 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 I + + K +E + + DA Sbjct: 124 RKIVKI-FLEIEGKEIEFYSCHMNLPNCIEENMEQNIQNILKHSSRNCLKILMGDFNTDA 182 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 Q + + D +Y + +S + R+D+I L+ + Sbjct: 183 FHDQSSYQKILEQGLFDSYTLSKKKDDGVTVYKNISGWENSVEEK---RLDYIFLTEQYE 239 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 + S+ + + + SDH + V L I E Sbjct: 240 --VESSYVIFNGKNYPCISDHNGLEVILKIKE 269 >gi|307708912|ref|ZP_07645372.1| endonuclease/Exonuclease/phosphatase family protein [Streptococcus mitis SK564] gi|307620248|gb|EFN99364.1| endonuclease/Exonuclease/phosphatase family protein [Streptococcus mitis SK564] Length = 271 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 34/273 (12%), Positives = 78/273 (28%), Gaps = 16/273 (5%) Query: 4 VTVATWNVNSI--RARIHNL---AAWIKENNPDIICLQETK-------TEDKNFPFETLQ 51 + T N +S + I E + D+IC QE E + Sbjct: 1 MKFLTLNTHSWMEKEAEEKFQILLEDILEKDYDLICFQEINQEITSSEVEVNDLYQALPA 60 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 + H + + ++ K + G D + I + I + + + ++ Sbjct: 61 AEPIHQDHYVRLLVEKLSEQGKNYYWTWAYNHIGYDRYHEGVAILSKTPIEAREILVSDV 120 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG-DYNIIPQPHDCYNPIIWE 170 P + + K + ++ + + + + + + Sbjct: 121 DDPTDYHTRRVALAETVVDGKELAVASVHLSWWDKGFQGEWARFESVLKELNKPLLLAGD 180 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230 + E Q+ +G DA + Y+ + +RID+I + Sbjct: 181 FNNPAGQEGYQAILASP-LGLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYIFTTQ 239 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 E + + + SDH + L+ Sbjct: 240 ELA--VEHLHVVFDGNKSPQVSDHYGLNAILNW 270 >gi|187779732|ref|ZP_02996205.1| hypothetical protein CLOSPO_03328 [Clostridium sporogenes ATCC 15579] gi|187773357|gb|EDU37159.1| hypothetical protein CLOSPO_03328 [Clostridium sporogenes ATCC 15579] Length = 263 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 40/269 (14%), Positives = 79/269 (29%), Gaps = 15/269 (5%) Query: 4 VTVATWNVNSIRARIHN------LAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYH 56 + V T N +S LA I ENN D+I LQE ++ + F+ ++ N+ Sbjct: 1 MKVLTLNCHSW-QEKKQIEKIRYLAKVIYENNYDVIALQEVSQSINSKILFDNIKEDNFA 59 Query: 57 IE-TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT-INTQTLRIGNLYLP 114 + + + I + L + ++ + N + Sbjct: 60 LILIKELEKLGENRFKILWDFAHIGYDKYEEGLAILTKYPIKEKDSFYISKSKDRNFWKT 119 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 Y++ + + E + + + C + NDA Sbjct: 120 RKIIKCKIYYNNHLISLYSCHLGWWDDEEEDFKFQVNKLVQDLKEEETCILMGDFNNDAF 179 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E + + + D + + S K +RID I+ + Sbjct: 180 LRYEG---YDYVIDKNLKDIYDLGKSKDNGVTVIGNIDGWESNRKNMRIDLILSNKNLD- 235 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + R+ SDH V ++I Sbjct: 236 -IEYCRVIFNGINKEIISDHFGVEAKIEI 263 >gi|327192091|gb|EGE59069.1| hypothetical protein RHECNPAF_248003 [Rhizobium etli CNPAF512] Length = 267 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 8/40 (20%), Positives = 19/40 (47%), Gaps = 2/40 (5%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQET-KTED 42 + + + N L ++++ + D++CLQE + D Sbjct: 1 MRIISLNAWGGSLH-EALIDYVRQADADVLCLQEVLRAPD 39 >gi|324994996|gb|EGC26909.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis SK678] Length = 749 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 35/90 (38%), Gaps = 13/90 (14%) Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT---K 250 + HD YS++ Y + S +D+I +S A + + Sbjct: 600 NLMQEHDAADRYSYF-YRGSNQS------LDNIFISKNLAGKAVFAPVHINASFMEEHGR 652 Query: 251 PSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 SDH PV+V LD K STS + +P Sbjct: 653 ASDHDPVVVQLDF---SKDIAASTSDSSQP 679 >gi|324993691|gb|EGC25610.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis SK405] gi|325696321|gb|EGD38212.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis SK160] Length = 749 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 35/90 (38%), Gaps = 13/90 (14%) Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT---K 250 + HD YS++ Y + S +D+I +S A + + Sbjct: 600 NLMQEHDAADRYSYF-YRGSNQS------LDNIFISKNLAGKAVFAPVHINASFMEEHGR 652 Query: 251 PSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 SDH PV+V LD K STS + +P Sbjct: 653 ASDHDPVVVQLDF---SKDIAASTSDSSQP 679 >gi|190891534|ref|YP_001978076.1| hypothetical protein RHECIAT_CH0001932 [Rhizobium etli CIAT 652] gi|190696813|gb|ACE90898.1| hypothetical conserved protein [Rhizobium etli CIAT 652] Length = 253 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 8/40 (20%), Positives = 19/40 (47%), Gaps = 2/40 (5%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQET-KTED 42 + + + N L ++++ + D++CLQE + D Sbjct: 1 MRIISLNAWGGSLH-EALIDYVRQADADVLCLQEVLRAPD 39 >gi|298376245|ref|ZP_06986201.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_19] gi|298267282|gb|EFI08939.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_19] Length = 304 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 40/283 (14%), Positives = 92/283 (32%), Gaps = 35/283 (12%) Query: 2 SVVTVATWNV--NSIRARIH--NLAAWIKENNPDIICLQETKTEDKN------FPFETLQ 51 + V V+++N+ N++ ++ A I+ + DI+ +QE +++ P E + Sbjct: 26 ATVKVSSFNIWLNTLGGKLPPSQTAKVIEASQTDIVGIQEGHIYEEDGIKHDHVP-EIAE 84 Query: 52 SLNYHIETCGQKSYN-------GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 SL +H+ G+ Y I++ + +I Sbjct: 85 SLGFHLFNQGEGHYILSRYPVVDSTASRYGVKIQVGKDKFCWMFNCHLYYIPYQPYQLNG 144 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 ++ + + + R+ + Q ++ P+ GD+N + Sbjct: 145 IPYGDYPFIDTEEEAVRFANEARREEVTRYQKDIQQVMKEGYPVFLTGDFNEP--SFLDW 202 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH---HLYSFWDYYADSWSKNKGI 221 + D + + +G D+ R H Y++ ++ + Sbjct: 203 TQRAADADIHKIKVEWPATKAFSEIGMNDSYRTIHPDEVSTPGYTWTPVPSEQEILD--- 259 Query: 222 RIDHIMLSPEATSLLHSARI------DTKPRGWTKPSDHTPVI 258 R+D ++ S + + I + PSDH V Sbjct: 260 RLDFVLYSG---CKVTDSFITGESEATSDVVVSPYPSDHRMVT 299 >gi|288922333|ref|ZP_06416526.1| Endonuclease/exonuclease/phosphatase [Frankia sp. EUN1f] gi|288346325|gb|EFC80661.1| Endonuclease/exonuclease/phosphatase [Frankia sp. EUN1f] Length = 321 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 7/40 (17%) Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 RIDHI+ SP + +I G SDH PV+ L Sbjct: 286 RIDHILASPAFA--ITGYQI-----GSEFGSDHKPVLADL 318 >gi|77917592|ref|NP_001030119.1| tyrosyl-DNA phosphodiesterase 2 [Rattus norvegicus] gi|123780895|sp|Q3T1H5|TYDP2_RAT RecName: Full=Tyrosyl-DNA phosphodiesterase 2; Short=Tyr-DNA phosphodiesterase 2; AltName: Full=5'-tyrosyl-DNA phosphodiesterase; Short=5'-Tyr-DNA phosphodiesterase; AltName: Full=TRAF and TNF receptor-associated protein gi|74354452|gb|AAI01921.1| Traf and Tnf receptor associated protein [Rattus norvegicus] Length = 366 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 42/280 (15%), Positives = 77/280 (27%), Gaps = 51/280 (18%) Query: 2 SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 S ++ TWN++ + RAR + + + +PD++ LQE P Sbjct: 118 STISFITWNIDGLDGCNLPERAR--GVCSCLALYSPDVVFLQEV------IPS------- 162 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 Y + + ++ + G I T + L N+ L Sbjct: 163 YCAYLRKRARTYNIITGNEEGYFTAILLKKGRVKFKGQEIIPFPNTKMMRNLLCVNVSLG 222 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 T + + + + + Q +I+ D Sbjct: 223 GNEFCLMTSHLESTRKHSAERINQLKTVFQKM------------QEATDSTTVIFAGDTN 270 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI--------DHI 226 + L + F H Y+ WD A N +RI D I Sbjct: 271 LRDQEVIKCGGLPDNVFDAWEFLGKPKHCRYT-WDTKA-----NDNLRIPAACKHRFDRI 324 Query: 227 MLSPE---ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 E + PSDH ++ +L++ Sbjct: 325 FFRAEEGHLIPQSLDLIGLERLDCGRFPSDHWGLLCTLNV 364 >gi|312222726|ref|NP_001185949.1| protein angel homolog 2 isoform 2 [Mus musculus] gi|74177577|dbj|BAE38898.1| unnamed protein product [Mus musculus] gi|74187259|dbj|BAE22620.1| unnamed protein product [Mus musculus] Length = 522 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 31/97 (31%), Gaps = 5/97 (5%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73 R N+ IK + D++CLQE ++ ++ E L+SL YH E + Sbjct: 178 RFPNILKEIKHFDADVLCLQEV--QEDHYGTEIRPSLESLGYHCEYKMKTGRKPDGCAIC 235 Query: 74 YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 ++ + L + Sbjct: 236 FKHSRFSLLSVNPVEFCRRDIPLLDRDNIGLVLLLQP 272 >gi|197101543|ref|NP_001125837.1| protein angel homolog 2 [Pongo abelii] gi|55729392|emb|CAH91428.1| hypothetical protein [Pongo abelii] Length = 522 Score = 46.3 bits (108), Expect = 0.005, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 5/63 (7%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73 R N+ IK + D++CLQE ++ ++ E L+SL YH E + Sbjct: 178 RFPNILKEIKHFDADVLCLQEV--QEDHYGAEIRPSLESLGYHCEYKMRTGRKPDGCAIC 235 Query: 74 YQP 76 ++ Sbjct: 236 FKH 238 >gi|326917345|ref|XP_003204960.1| PREDICTED: tyrosyl-DNA phosphodiesterase 2-like [Meleagris gallopavo] Length = 366 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 32/280 (11%), Positives = 70/280 (25%), Gaps = 49/280 (17%) Query: 2 SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 S ++ TWN++ + RAR + +++ +PD++ LQE Sbjct: 116 SSFSLITWNIDGLDLGNLQERAR--GVCSYLTLYSPDVVFLQEV---------------- 157 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 + + I+ + + +R + Sbjct: 158 --------IPPYLCILQRRAGGYTIIPGNVDGYFTAMLLKKPRVKVLKQEIIRFPTTSMM 209 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 + + +++ E N + + + I + Sbjct: 210 RNLLVVHVNISGNELCLMTSHLESTRDHSKERMKQLQIVLNKMQEESESTTVIFGGDTNL 269 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF--WDYYADSWSKNKGIRIDHIMLSPEA 232 EV + +N+ H Y++ +R D + Sbjct: 270 RDSEVAKLGGLPKNITDVWEFLGK-PQHCRYTWDTSSNTNLRIESKCKLRFDRLY----F 324 Query: 233 TSLLHSARIDT---KPRGWTK------PSDHTPVIVSLDI 263 I G K PSDH ++ D+ Sbjct: 325 RPAAEGGHIIPRNMDLIGLEKLDCGRFPSDHWGLLCHFDV 364 >gi|253996227|ref|YP_003048291.1| Endonuclease/exonuclease/phosphatase [Methylotenera mobilis JLW8] gi|253982906|gb|ACT47764.1| Endonuclease/exonuclease/phosphatase [Methylotenera mobilis JLW8] Length = 251 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 26/267 (9%), Positives = 69/267 (25%), Gaps = 29/267 (10%) Query: 2 SVVTVATWNVN-SIR-----ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55 + + +AT+N++ + +H+ +++ + D++ LQE + + + Sbjct: 3 NTLRIATFNIHKGLTHFNTSLSLHHQRELLRKLHADVVFLQEVR--------DVHHEHSR 54 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + + ++ + + I T + I Sbjct: 55 RFDAWPTAGQMEFLADTIWKDYAYGKNAVYPAGHHGNALLSKFPIIKTTNIDISAHSSEE 114 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + S + + I + ++P+I D Sbjct: 115 RGMLHSEINIPNWDTPLHTICVHLGLFARWRKQQLILIKDYIQRHIPAHSPLIVAGDFND 174 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLY-SFWDYYADSWSKNKGIRIDHIMLSPEATS 234 Q + S+ +R+D I + Sbjct: 175 WGMRSGRHFSHQVGLQEVFAHQNGKPARSFPSWLPI----------LRLDRIY-TRGF-- 221 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261 + + + + K SDH + +L Sbjct: 222 KIQHVEVHSGA-HFVKLSDHAMLSATL 247 >gi|253698977|ref|YP_003020166.1| endonuclease/exonuclease/phosphatase [Geobacter sp. M21] gi|251773827|gb|ACT16408.1| Endonuclease/exonuclease/phosphatase [Geobacter sp. M21] Length = 343 Score = 45.9 bits (107), Expect = 0.005, Method: Composition-based stats. Identities = 41/262 (15%), Positives = 74/262 (28%), Gaps = 23/262 (8%) Query: 4 VTVATWNVNSIRARIHNLAAW---IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 + V TWN I+ H+L ++ + PDI+ Q Y Sbjct: 95 LRVMTWN---IKYGKHDLMPLVEELERSRPDIVLFQ------DAVRAGAGPLAGY-FRDW 144 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +S I S+Y + F+ + + + + +++ Sbjct: 145 HLRSRGQYLIASRYPLSAAEVFELPYSGRRKEYFLRCKVLVGSSEISLYDVHFKTPRRSL 204 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K ++ A +R E L + P++ D Sbjct: 205 NAF--RKAKHGPWYIPGAVERFEDNVTLRLIQARTVAGYISRETGPVLVAGDLNSPDPSL 262 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD-SWSKNKGIRIDHIMLSPEATSLLHSA 239 + A + Y + W + +RIDHIM + Sbjct: 263 VCRTLREAGLADAFAAAGKGYGYTYGHFLLKNRIPWLRVSWMRIDHIMTNSWLV--ASRC 320 Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261 R+ G + SDH PVI Sbjct: 321 RV-----GTGRASDHRPVIADF 337 >gi|115398812|ref|XP_001214995.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114191878|gb|EAU33578.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 436 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 41/301 (13%), Positives = 76/301 (25%), Gaps = 39/301 (12%) Query: 3 VVTVATWNVNSIR-------ARIHNLAAWIKENNP--DIICLQETKTED--KNFPFETLQ 51 + + T N ++ R+ + + +P +I+ LQE T+ ++ +T Sbjct: 14 TIRILTLNCWGLKYIAKYRYQRLSEIGRQLALADPPPEIVGLQECWTQQDYESIRQQTRH 73 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ---TLRI 108 L Y G G+AILSK+ E H + A F + +R Sbjct: 74 LLPYGKFYFGGIWGAGLAILSKWPIEESSMHAYPLNGRPTAFFRGDWYVGKGVACARIRF 133 Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168 G + + T + + E Sbjct: 134 GAHPVHDVAEVFCTHLHAPYEKEPNDSYICHRTAQAWEIAKLMRGAADRGHLVIGLGDFN 193 Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIR--------ATHDTHHLYSFWDYYADSWSK--- 217 + + ++ W + + Sbjct: 194 MLPSVIHPDSSVGAAIDPVEKKRNRPVPSAEFNLRVNGATCDGRFNTWRWEKAERKRLAR 253 Query: 218 ------------NKGIRIDHIMLSPE--ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +G R+D+I + P A + A P SDH V + Sbjct: 254 GEDVTVDPDAPCPRGKRLDYIFVGPSRWAVDDVRIAMTQRHPTLKCSLSDHFAVEAVISR 313 Query: 264 P 264 P Sbjct: 314 P 314 >gi|317478380|ref|ZP_07937544.1| endonuclease/Exonuclease/phosphatase [Bacteroides sp. 4_1_36] gi|316905539|gb|EFV27329.1| endonuclease/Exonuclease/phosphatase [Bacteroides sp. 4_1_36] Length = 283 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 42/271 (15%), Positives = 78/271 (28%), Gaps = 30/271 (11%) Query: 6 VATWNV---------NSIRARIHNLAAWIKENNPDIICLQE-TKTEDKNFPFETLQS--L 53 V ++N+ N+ + R + A I PDII +QE K + + Q L Sbjct: 30 VMSFNIRLDHVADSMNNWKYRKDHAAQMIAYYAPDIIGMQEVVKNQLDDLKERLPQYTAL 89 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 +K + + + G + + + + + Sbjct: 90 GVGRADGEEKGEYCSLFYKTDRFELLKSGNFGLSETPDSIGKKGWDAACERIVT-WAVLK 148 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + ++ + + R S L LE+ AG + Sbjct: 149 DKVSGREIAAFNTHFDHVGKVARRESAVLILEKIKQMAG-------DLPVIVTGDFNGTV 201 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR-IDHIMLSPEA 232 + ++N T + W ++ + R ID I + A Sbjct: 202 DSEPVTVLTEGGMKNACVTAKVAYGPT-------WSFHDFGRIPVEKRRLIDFIFI-KGA 253 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + ID KP SDH PV+ L + Sbjct: 254 VEVERYRTIDDKP-DNGYLSDHAPVMAILKL 283 >gi|325269228|ref|ZP_08135847.1| endonuclease/exonuclease/phosphatase family protein [Prevotella multiformis DSM 16608] gi|324988457|gb|EGC20421.1| endonuclease/exonuclease/phosphatase family protein [Prevotella multiformis DSM 16608] Length = 326 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 28/260 (10%), Positives = 67/260 (25%), Gaps = 44/260 (16%) Query: 30 PDIICLQETKTEDKNFPFET-----LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLP 84 PDI+ L E E+ + F+ L+ Y G+ + Y P Sbjct: 84 PDIVGLCEV--ENDSVLFDLTRRSLLRKARYEYVMTASGDVRGIDVALLYSPFSFRLIRA 141 Query: 85 GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL 144 + T + + +G+ + ++ + Sbjct: 142 DTIRVAPILDMRPTRD-----ILHVEGEVENGDTLHVFLVHAPSRMGGELYSRPFRKHVV 196 Query: 145 EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL 204 + + ND + ++ ++ + + R ++ Sbjct: 197 NRLCDAVDSLRLCHSD-PKVLVMGDFNDYPDSPSLQTAYTHGL-VNVSAEARGSNGAKGT 254 Query: 205 YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKP------------------- 245 Y + +W +D I++S + + Sbjct: 255 YRY----HGAWGS-----LDQILVSENLRERVSGCHVHDAVFLLEPDEKYGGVKPRRNYN 305 Query: 246 --RGWTKPSDHTPVIVSLDI 263 R SDH P+++ L++ Sbjct: 306 GMRYNNGFSDHLPLVLHLEL 325 >gi|269127062|ref|YP_003300432.1| endonuclease/exonuclease/phosphatase [Thermomonospora curvata DSM 43183] gi|268312020|gb|ACY98394.1| Endonuclease/exonuclease/phosphatase [Thermomonospora curvata DSM 43183] Length = 644 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 35/272 (12%), Positives = 75/272 (27%), Gaps = 60/272 (22%) Query: 4 VTVATWNVN-SIRAR----IHNLAAWIKENNPDIICLQET-------KTEDKNFPFETLQ 51 + V T+N++ + A + LAA I+ D++ LQE T D Sbjct: 419 LRVLTYNIHHGVNAAGKLDLDALAAVIERQRADVVLLQEVGRGSLVSGTTDVGVWLSRRL 478 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 ++ + + S+ +P D ++ A + + + + + Sbjct: 479 GMHLIWGPAADGQFGNAILTSRRVLSSGSARMPKGDWSQIRGYVWARLDVGGRPVYVWST 538 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 +L G + + + + + I Sbjct: 539 HLDGGADRAAARQ---------------------------REIAALLRAWGGAPRTIIGG 571 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 D + + L G + + G ++D I+ + + Sbjct: 572 DMNSEPGSAEMSRFLDGTGLRASALGDYAPTTP--------------AGKKVDWILGTDD 617 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + K SDH PV V++ I Sbjct: 618 LV--FSDHGVHPS-----KTSDHYPVAVTVRI 642 >gi|269104284|ref|ZP_06156980.1| metal-dependent hydrolase [Photobacterium damselae subsp. damselae CIP 102761] gi|268160924|gb|EEZ39421.1| metal-dependent hydrolase [Photobacterium damselae subsp. damselae CIP 102761] Length = 296 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 41/276 (14%), Positives = 82/276 (29%), Gaps = 20/276 (7%) Query: 4 VTVATWN---VNS------IRARIH--NLAAWIKENNPDIICLQET---KTEDKNFPFET 49 + + +WN +N +R + + I++ +PDI+ QE K P + Sbjct: 26 LRIMSWNMQWLNHHASSPVLRDTDDFSQIRSIIEQVDPDILAFQEVGSLKAMTMVLPLKQ 85 Query: 50 LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI-NTQTLRI 108 L + + +++ I ++ +L + + + L+I Sbjct: 86 YDIL---LSSRADHPRYTFPNTNQFTGFAIRKNIRYRELPDFTKINLNKKGLRYGKNLKI 142 Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168 K K S + R ++L+L + N Sbjct: 143 WWQDQQIHLLNIHLKAGCKQSKRSKACRQLKKQLKLLSLWLKTRIENNHSYILLGDFNYP 202 Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 E + + + +G H T ++ S IDH++ Sbjct: 203 LYTSLNNKKEKQHNHWFFKQLGIPTTALKQHKTSFSCQIKIHHKKSRLITYTQPIDHVIS 262 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 S L + + K + SDH P+ IP Sbjct: 263 DKINISKLETYQYTNKEMSSNQLSDHCPLY--FSIP 296 >gi|254295374|ref|YP_003061397.1| endonuclease/exonuclease/phosphatase [Hirschia baltica ATCC 49814] gi|254043905|gb|ACT60700.1| Endonuclease/exonuclease/phosphatase [Hirschia baltica ATCC 49814] Length = 315 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 43/283 (15%), Positives = 71/283 (25%), Gaps = 60/283 (21%) Query: 25 IKENNPDIICLQE-------TKTEDKNFPFETLQSLNYH------------------IET 59 + + DI CLQE T ++ + Y ++ Sbjct: 49 LSASQADICCLQEVENLVTLTAFHNRYLRRWLKKGYFYRALVEGNDQRGIDVGVLSRVKI 108 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 + S+ + H IE + TL + + HG Sbjct: 109 IRKLSHADKTYADLNIKPPLGCHENDRIFRRDCLEIEVEKEGKSLTLFVCHFKSMHGGRT 168 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + + + R L E I GD+N D Sbjct: 169 ETKPVREAEAKAVRILIEQRFADPEAENWIALGDFND-YFELDGATLFDHGLGPLIRDGF 227 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + + +Y + +DHI +SP + A Sbjct: 228 AIDAGVTLEKSPLNRWTHYYSHGDVY-------GA--------LDHIFMSPSLAARNQDA 272 Query: 240 RI-------------DTKPR----GWTKP--SDHTPVIVSLDI 263 R+ R GW +P SDH P+ V+L I Sbjct: 273 RLRIVRAGQPLRANRYKGHRFGGVGWMRPKSSDHCPLSVTLSI 315 >gi|225681096|gb|EEH19380.1| inositol phosphosphingolipids phospholipase C [Paracoccidioides brasiliensis Pb03] Length = 521 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 55/343 (16%), Positives = 97/343 (28%), Gaps = 65/343 (18%) Query: 4 VTVATWNVNSIRA----RIHNLAAW---IKENN--PDIICLQETKTEDK--NFPFETLQS 52 +++ T N ++ R L I +N P I+ LQE T++ N ET + Sbjct: 13 ISILTLNCWGLKFLSKYRRERLLEIGKRIAGSNNPPHIVGLQECWTQEDYNNIRRETQEI 72 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ---TLRIG 109 L Y G+AILSK+ E + A F F +RIG Sbjct: 73 LPYGKFYYSGIFGGGLAILSKWPIEESTMFAYPLNGRPTAFFRGDWFVGKGVACARIRIG 132 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIF------------AGDYNII 157 + + + E + GD+N++ Sbjct: 133 PASTDIADVFCTHLHAPYEREPHDSYICHRTAQAWEIVKLMRAAAEKGHLVIGLGDFNML 192 Query: 158 PQ--------------PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHH 203 PQ + A + + + F Sbjct: 193 PQSLAHRLITSHAPVKDVWSHLHPDSSIGAAIDAAEMARKKPIPSADFNVLENGATCDGI 252 Query: 204 LYSF-WDYYADSWSKNKG-------------IRIDHIML--------SPEATSLLHSARI 241 ++ W+ + K +G R+D+I + S + SAR+ Sbjct: 253 FNTWRWNKTQQNRLKREGNIVVDGELPDPLAKRLDYIYVGDGAFGQFSSPKKWTISSARV 312 Query: 242 ---DTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 + P SDH V ++ + + + + PI Sbjct: 313 GMMERHPTLHCSLSDHFSVEATIVLDTSKDSDAEDEQNSFLPI 355 >gi|163756803|ref|ZP_02163912.1| endonuclease/exonuclease/phosphatase family protein [Kordia algicida OT-1] gi|161323192|gb|EDP94532.1| endonuclease/exonuclease/phosphatase family protein [Kordia algicida OT-1] Length = 344 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 44/277 (15%), Positives = 88/277 (31%), Gaps = 48/277 (17%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENN-------------PDIICLQE-TKTEDKNFPF 47 + ++V ++NV R+ N+ WIKE + PD++ QE K + F F Sbjct: 102 NSISVMSYNV-----RLFNIYNWIKETHVDKKIVDLVHADFPDVVAFQEFHKNQQAAFNF 156 Query: 48 ETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107 Y + K N + + IV + + I N T+R Sbjct: 157 -------YTYKHVVLKGKNKKTGQAIFSKYPIVHKGSLEFPNTPNNAIYIDIVKNKDTIR 209 Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167 + NL+L + ++++ + A + I + I Sbjct: 210 VYNLHLQS---LRINPQKEELTQENSERLLKRMAKTFKMQQSQAELFEINRKNCTYKKII 266 Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227 + + + V ++ + F +A T Y F+ +RID ++ Sbjct: 267 LGDFNNSQFSNVYKTIKGSMKDAFVEAGSGFGKTLD-YPFFP-----------MRIDFVL 314 Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 + T ++ SDH + + + Sbjct: 315 VDESFT-------VNKFKTFTEHYSDHYAIQSVISLD 344 >gi|154287170|ref|XP_001544380.1| predicted protein [Ajellomyces capsulatus NAm1] gi|150408021|gb|EDN03562.1| predicted protein [Ajellomyces capsulatus NAm1] Length = 411 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 28/75 (37%), Gaps = 8/75 (10%) Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 + W G ID LSP L I + K SDH P+ +L+I Sbjct: 100 TTWQDRGSP-----GTTIDLTFLSPLLHDKLRRCAIAEEA---CKGSDHKPMETTLEITP 151 Query: 266 PRKKQQDSTSQNMKP 280 K+ + ++ +P Sbjct: 152 IPKEAERRNWKDAEP 166 >gi|327490122|gb|EGF21910.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis SK1058] Length = 749 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 35/90 (38%), Gaps = 13/90 (14%) Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT---K 250 + HD YS++ Y + S +D+I +S A + + Sbjct: 600 NLMQEHDAADRYSYF-YRGSNQS------LDNIFISKNLAGKAVFAPVHINASFMEEHGR 652 Query: 251 PSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 SDH PV+V LD K STS + +P Sbjct: 653 ASDHDPVVVQLDF---SKDVAASTSDSSQP 679 >gi|327462960|gb|EGF09281.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis SK1] Length = 749 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 35/90 (38%), Gaps = 13/90 (14%) Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT---K 250 + HD YS++ Y + S +D+I +S A + + Sbjct: 600 NLMQEHDAADRYSYF-YRGSNQS------LDNIFISKNLAGKAVFAPVHINASFMEEHGR 652 Query: 251 PSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 SDH PV+V LD K STS + +P Sbjct: 653 ASDHDPVVVQLDF---SKDVAASTSDSSQP 679 >gi|325690981|gb|EGD32981.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis SK115] Length = 749 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 35/90 (38%), Gaps = 13/90 (14%) Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT---K 250 + HD YS++ Y + S +D+I +S A + + Sbjct: 600 NLMQEHDAADRYSYF-YRGSNQS------LDNIFISKNLAGKAVFAPVHINASFMEEHGR 652 Query: 251 PSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 SDH PV+V LD K STS + +P Sbjct: 653 ASDHDPVVVQLDF---SKDVAASTSDSSQP 679 >gi|320335581|ref|YP_004172292.1| endonuclease/exonuclease/phosphatase [Deinococcus maricopensis DSM 21211] gi|319756870|gb|ADV68627.1| Endonuclease/exonuclease/phosphatase [Deinococcus maricopensis DSM 21211] Length = 309 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 47/260 (18%), Positives = 79/260 (30%), Gaps = 53/260 (20%) Query: 5 TVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 + T+N+ AR LA I PD++CLQET + P L+ L + Sbjct: 94 RLMTYNI----ARGTGGAAELARVISRAEPDVVCLQET---NTVLPG-VLRDLERRLPGY 145 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 V +LS++ + D R + AT + Q + + NL+ Sbjct: 146 AAARSREVVVLSRFPVTGVQDR---ALPDTTRRLLRATVRVRGQPVTLLNLHFTTVLWRG 202 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + R P++ GD+N P+ ++A Sbjct: 203 GWAGARDRRAAQVRAVLQVARQTRG-PVVACGDFNTPPRGLVDAALREQFSNAFAQAGAG 261 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + Y + + RIDH+ L +A Sbjct: 262 ---------------------------FGYTFPARAPLV--RIDHVWLRRA---SAVAAF 289 Query: 241 IDTKPRGWTKPSDHTPVIVS 260 + R SDH P++V Sbjct: 290 V-PDAR----ASDHRPLVVD 304 >gi|253761401|ref|XP_002489104.1| hypothetical protein SORBIDRAFT_0069s002020 [Sorghum bicolor] gi|241947391|gb|EES20536.1| hypothetical protein SORBIDRAFT_0069s002020 [Sorghum bicolor] Length = 659 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 40/261 (15%), Positives = 78/261 (29%), Gaps = 34/261 (13%) Query: 4 VTVATWNVNSI--RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + WNV + +R + +I E+ ++ LQET ++ E L T Sbjct: 1 MRFLFWNVRGLGKTSRKQQVREFIGEHKLQMVGLQET-MKESFSDRELLDIAGTREFTWQ 59 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 G + L + + R +Y P + + Sbjct: 60 YLPSKGKSGGILMGVDLENLELEDFSIHDFCIMMSVRDRRTNFRWRFITVYGPANHDLAD 119 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 D+ + + I GD+N+I + +D + I E Sbjct: 120 AFLDELKAVCQESPLPV----------ILGGDFNLIREANDKNSENINMGLINIFNEFIG 169 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL--LHSA 239 Q +R + Y++ + + N +D ++ S L ++ Sbjct: 170 EMQ----------LRELKRSGQRYTWTNKQNNPILVN----LDRVLFSVNWEDHFPLSTS 215 Query: 240 RIDTKPRGWTKPSDHTPVIVS 260 T+ SDH P++V Sbjct: 216 WGLTRV-----GSDHMPILVD 231 >gi|226292203|gb|EEH47623.1| inositol phosphosphingolipids phospholipase C [Paracoccidioides brasiliensis Pb18] Length = 521 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 55/343 (16%), Positives = 97/343 (28%), Gaps = 65/343 (18%) Query: 4 VTVATWNVNSIRA----RIHNLAAW---IKENN--PDIICLQETKTEDK--NFPFETLQS 52 +++ T N ++ R L I +N P I+ LQE T++ N ET + Sbjct: 13 ISILTLNCWGLKFLSKYRRERLLEIGKRIAGSNNPPHIVGLQECWTQEDYNNIRRETQEI 72 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ---TLRIG 109 L Y G+AILSK+ E + A F F +RIG Sbjct: 73 LPYGKFYYSGIFGGGLAILSKWPIEESTMFAYPLNGRPTAFFRGDWFVGKGVACARIRIG 132 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIF------------AGDYNII 157 + + + E + GD+N++ Sbjct: 133 PASTDIADVFCTHLHAPYEREPHDSYICHRTAQAWEIVKLMRAAAEKGHLVIGLGDFNML 192 Query: 158 PQ--------------PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHH 203 PQ + A + + + F Sbjct: 193 PQSLAHRLITSHAPVKDVWSHLHPDSSIGAAIDAAEMARKKPIPSADFNVLENGATCDGI 252 Query: 204 LYSF-WDYYADSWSKNKG-------------IRIDHIML--------SPEATSLLHSARI 241 ++ W+ + K +G R+D+I + S + SAR+ Sbjct: 253 FNTWRWNKTQQNRLKREGNIVVDGELPDPLAKRLDYIYVGDGAFGQFSSPKKWTISSARV 312 Query: 242 ---DTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 + P SDH V ++ + + + + PI Sbjct: 313 GMMERHPTLHCSLSDHFSVEATIVLDTSKDSDAEDEQNSFLPI 355 >gi|223938378|ref|ZP_03630272.1| Endonuclease/exonuclease/phosphatase [bacterium Ellin514] gi|223892947|gb|EEF59414.1| Endonuclease/exonuclease/phosphatase [bacterium Ellin514] Length = 254 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 30/252 (11%), Positives = 56/252 (22%), Gaps = 24/252 (9%) Query: 17 RIHNLAAWIKENNPDIICLQE-----TKTEDKNFPFETLQSLNYHIETCGQKSYNGVAIL 71 R + IK +PD++ QE K + P L + + + Sbjct: 19 RRPAMQECIKSVSPDVMGTQEGLYGQIKDIASDLPDYDWIGLGRNGGSRSEFMAVFYRKS 78 Query: 72 SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWI 131 L + + +R + +T +D ++ Sbjct: 79 RLEPMEYDHFWLSDTPDVIGSSTWGNKNRRMVTWVRFKDRQTGKEFYFFNTHFDHEVQKA 138 Query: 132 KRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191 + ++ N L+ Sbjct: 139 REKSAELVRQRIEGLKTELPVILGGDFNGGAGTNAAYKILMEGDFLKDTWVTAPQHRGNV 198 Query: 192 TDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP 251 H G RID I+ T +A + T + P Sbjct: 199 VGTFHGYHKAVP---------------NGPRIDWILTRGPVT--AEAAEVITFSKSGEMP 241 Query: 252 SDHTPV--IVSL 261 SDH P+ + Sbjct: 242 SDHFPIATWLEF 253 >gi|125718549|ref|YP_001035682.1| extracellular nuclease, putative [Streptococcus sanguinis SK36] gi|125498466|gb|ABN45132.1| Extracellular nuclease, putative [Streptococcus sanguinis SK36] Length = 749 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 23/90 (25%), Positives = 35/90 (38%), Gaps = 13/90 (14%) Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT---K 250 + HD YS++ Y + S +D+I +S A + + Sbjct: 600 NLMQEHDAADRYSYF-YRGSNQS------LDNIFISKNLAGKAVFAPVHINASFMEEHGR 652 Query: 251 PSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 SDH PV+V LD K STS + +P Sbjct: 653 ASDHDPVVVQLDF---SKDVAASTSDSSQP 679 >gi|319938670|ref|ZP_08013034.1| RgfB protein [Streptococcus anginosus 1_2_62CV] gi|319811720|gb|EFW07986.1| RgfB protein [Streptococcus anginosus 1_2_62CV] Length = 271 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 26/254 (10%), Positives = 58/254 (22%), Gaps = 17/254 (6%) Query: 18 IHNLAAWIKENNPDIICLQETK--TEDKNFPFETLQSLNYHIETCGQKSYNGVAILS--- 72 + LA I + D+ICLQE E + YH + Sbjct: 21 LDQLAERILQEKYDVICLQEVNQGMESEQVVQAPF----YHAVDGAIAIHKDHFACCLVE 76 Query: 73 ------KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDD 126 + G D + I + + L + + P + Sbjct: 77 KLAKRGLIYHWSWAYNHIGFDRFHEGVAILSLKPLKPSELLVSDANDPTDYHTRKVLLAE 136 Query: 127 KISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL 186 + + ++ ++ + + Sbjct: 137 TEVDGRLVTVTSCHLSWWDKGFQEEWGQVEKELLQRDMPLVLMGDFNNPVGYEGYQYILK 196 Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR 246 + D+ + A ++ID+I S + + + + + Sbjct: 197 SPLALQDSHAVAATVVGTATVEGDIAGWVGNKDALKIDYIFTSKDF--NVKKSAVVFDGK 254 Query: 247 GWTKPSDHTPVIVS 260 SDH + Sbjct: 255 ATPVVSDHFGLEAE 268 >gi|255656137|ref|ZP_05401546.1| putative endonuclease/exonuclease/phosphatase [Clostridium difficile QCD-23m63] gi|296450430|ref|ZP_06892186.1| endonuclease/exonuclease/phosphatase [Clostridium difficile NAP08] gi|296879447|ref|ZP_06903441.1| endonuclease/exonuclease/phosphatase [Clostridium difficile NAP07] gi|296260691|gb|EFH07530.1| endonuclease/exonuclease/phosphatase [Clostridium difficile NAP08] gi|296429593|gb|EFH15446.1| endonuclease/exonuclease/phosphatase [Clostridium difficile NAP07] Length = 209 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 9/42 (21%) Query: 4 VTVATWNV-------NSIRARIHNLAAWIKENNPDIICLQET 38 + + T+N+ N R + + ++K+ N D+ICLQE Sbjct: 1 MKIVTYNIHKGMDSNN--RLTLTKMGLYLKQLNCDVICLQEV 40 >gi|108862425|gb|ABA96964.2| retrotransposon protein, putative, LINE subclass [Oryza sativa Japonica Group] Length = 1682 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 2/34 (5%) Query: 9 WNVNSIRARIHN--LAAWIKENNPDIICLQETKT 40 WNV + A+ + A++ + I+CLQETK Sbjct: 819 WNVRGLNAQAKQDVVKAFVHKVGASIVCLQETKL 852 >gi|14389301|ref|NP_112650.1| sphingomyelin phosphodiesterase 2 [Rattus norvegicus] gi|20138814|sp|Q9ET64|NSMA_RAT RecName: Full=Sphingomyelin phosphodiesterase 2; AltName: Full=Lyso-platelet-activating factor-phospholipase C; Short=Lyso-PAF-PLC; AltName: Full=Neutral sphingomyelinase; Short=N-SMase; Short=nSMase gi|9757704|dbj|BAB08219.1| neutral sphingomyelinase [Rattus norvegicus] gi|60552699|gb|AAH91139.1| Sphingomyelin phosphodiesterase 2, neutral [Rattus norvegicus] gi|149046987|gb|EDL99735.1| sphingomyelin phosphodiesterase 2, neutral, isoform CRA_b [Rattus norvegicus] Length = 422 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 37/287 (12%), Positives = 80/287 (27%), Gaps = 45/287 (15%) Query: 15 RA-RIHNLAAWIKENNPDIICLQETKTEDK-----NFPFETLQSLNYHIETCGQKSYNGV 68 RA R+ L ++ + D+ L+E +E T +Y +G+ Sbjct: 26 RADRMKRLGDFLNLESFDLALLEEVWSEQDFQYLKQKLSLTYPDAHY---FRSGIIGSGL 82 Query: 69 AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN-----------LYLPHGN 117 + S++ EIV H+ + + F L + + + Sbjct: 83 CVFSRHPIQEIVQHVYTLNGYPYKFYHGDWFCGKAVGLLVLHLSGLVLNAYVTHLHAEYS 142 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + +++ +F + ++ GD N+ P+ C W + Sbjct: 143 RQKDIYFAHRVAQAWELAQFIHHTSKKANVVLLCGDLNMHPKDLGCCLLKEWTGLRDAFV 202 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 E + G+RID++ + Sbjct: 203 ETEDFKGSEDGCTMVPKNCYVSQQDL---------GPFP--FGVRIDYV-----LYKAVS 246 Query: 238 SARIDT---------KPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTS 275 I P T SDH ++ +L + ++ ++ Sbjct: 247 GFHICCKTLKTTTGCDPHNGTPFSDHEALMATLCVKHSPPQEDPCSA 293 >gi|240102422|ref|YP_002958731.1| Metal-dependent hydrolase [Thermococcus gammatolerans EJ3] gi|239909976|gb|ACS32867.1| Metal-dependent hydrolase [Thermococcus gammatolerans EJ3] Length = 584 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 23/72 (31%), Gaps = 7/72 (9%) Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPS 252 R Y+F K ID+I+L + + + S Sbjct: 520 RDYRDAFPERPPYTFLWERNGVVDKEN---IDYILLKNDWPAEVKDDGCLCDVL----VS 572 Query: 253 DHTPVIVSLDIP 264 DH PV +++P Sbjct: 573 DHRPVWAVIELP 584 >gi|126723004|ref|NP_001075923.1| nocturnin [Bos taurus] gi|126010657|gb|AAI33609.1| CCR4 carbon catabolite repression 4-like (S. cerevisiae) [Bos taurus] gi|296478738|gb|DAA20853.1| CCR4 carbon catabolite repression 4-like [Bos taurus] Length = 427 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 36/256 (14%), Positives = 64/256 (25%), Gaps = 28/256 (10%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFE--TLQSLNYHIETCGQKSYNGVAILSKYQPIE 78 + I PDI+CLQE D F L L Y + S +E Sbjct: 179 ILEEILAYQPDILCLQEV---DHYFDTFQPLLSRLGYQGTFFPKP-------WSPCLDVE 228 Query: 79 IVTHLPGD--DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 G + + I + + + + + + L+ Sbjct: 229 HNNGPDGCALFFLQNRFKLVNSANIRLTAMTLKTNQVAIAQTLECKESSRQFCIAVTHLK 288 Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN----MGFT 192 + N+ P+I D + Sbjct: 289 ARTGWERFRSAQGCDLLQNLQTITQGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAY 348 Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS------PEATSLLHSARIDTKPR 246 + A + Y+ W ++ +D+I S A LL +I Sbjct: 349 KLLSADGQSEPPYTTWKIRTSGECRHT---LDYIWYSRQALSVRSALDLLTEEQIGPNRL 405 Query: 247 -GWTKPSDHTPVIVSL 261 + PSDH ++ Sbjct: 406 PSFNYPSDHLSLVCDF 421 >gi|294947946|ref|XP_002785539.1| hypothetical protein Pmar_PMAR022273 [Perkinsus marinus ATCC 50983] gi|239899518|gb|EER17335.1| hypothetical protein Pmar_PMAR022273 [Perkinsus marinus ATCC 50983] Length = 475 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 4/42 (9%) Query: 1 MSVVTVATWNVNS-IR---ARIHNLAAWIKENNPDIICLQET 38 M +TV T+NV++ I+ RI L ++ + D++CLQE Sbjct: 23 MEDLTVLTYNVDTAIKDMPQRIKILIEVLQNRDYDVVCLQEV 64 >gi|58038559|ref|YP_190523.1| hypothetical protein GOX0070 [Gluconobacter oxydans 621H] gi|58000973|gb|AAW59867.1| Hypothetical membrane-spanning protein [Gluconobacter oxydans 621H] Length = 208 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 42/263 (15%), Positives = 77/263 (29%), Gaps = 72/263 (27%) Query: 5 TVATWNVNSIR---ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + +WN+ R A + ++ I+ +PDI+ +QE +T P E L Y+ Sbjct: 12 KILSWNL--YRWEGASLEDVLTVIRAEDPDIVVMQEAQTAVDELP-EILG--GYYDRIPL 66 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +G A S+ L I+ + + N++L HG + Sbjct: 67 PGRPHGTACWSRLPFT---RPPSFCRLPRGLLVKRTAQLIDFGSFSLANVHLSHGQILNR 123 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + IS R L P++ G ++ P+ Sbjct: 124 RQL-RSISANMRHRAVIMGDFNLVGPVLLPGFLDVGPKEKTHRMLNHVP----------- 171 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +R+D ++ S L Sbjct: 172 ---------------------------------------LRLDRCLV--RGLSRL----- 185 Query: 242 DTKPRGWTKP-SDHTPVIVSLDI 263 + R + SDH P+ V+L + Sbjct: 186 --EARALPRFGSDHRPISVTLRL 206 >gi|119613776|gb|EAW93370.1| angel homolog 2 (Drosophila), isoform CRA_e [Homo sapiens] Length = 522 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 5/63 (7%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73 R N+ IK + D++CLQE ++ ++ E L+SL YH E + Sbjct: 178 RFPNILKEIKHFDADVLCLQEV--QEDHYGAEIRPSLESLGYHCEYKMRTGRKPDGCAIC 235 Query: 74 YQP 76 ++ Sbjct: 236 FKH 238 >gi|70794813|ref|NP_067396.3| protein angel homolog 2 isoform 1 [Mus musculus] gi|81878438|sp|Q8K1C0|ANGE2_MOUSE RecName: Full=Protein angel homolog 2 gi|22137626|gb|AAH24907.1| Angel homolog 2 (Drosophila) [Mus musculus] gi|74177531|dbj|BAE34634.1| unnamed protein product [Mus musculus] gi|148681068|gb|EDL13015.1| angel homolog 2 (Drosophila), isoform CRA_a [Mus musculus] Length = 544 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 31/97 (31%), Gaps = 5/97 (5%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73 R N+ IK + D++CLQE ++ ++ E L+SL YH E + Sbjct: 200 RFPNILKEIKHFDADVLCLQEV--QEDHYGTEIRPSLESLGYHCEYKMKTGRKPDGCAIC 257 Query: 74 YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 ++ + L + Sbjct: 258 FKHSRFSLLSVNPVEFCRRDIPLLDRDNIGLVLLLQP 294 >gi|312277609|gb|ADQ62266.1| Metal-dependent hydrolase [Streptococcus thermophilus ND03] Length = 303 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 28/272 (10%), Positives = 69/272 (25%), Gaps = 26/272 (9%) Query: 2 SVVTVATWNVNSIRARIH----NLAAWIKEN----NPDIICLQETKTEDKNFPFETLQ-S 52 ++ T N +S + +KE DIIC QE ++ ++ Sbjct: 32 KIMKFLTLNTHS---WMEEDAEGKFQTLKEQILKAQYDIICFQEV---NQEIETAAVETD 85 Query: 53 LNYHIETCGQKSYNGVAIL---------SKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 YH+ + + + G D + + + + Sbjct: 86 AYYHVLPSATSIHQDHFVRLLVEKLAEEGLQYHWTWAYNHIGYDHLNEGVAVLSRQPLTA 145 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 + + ++ P + + + ++ Sbjct: 146 SEILVSDVDDPTDYHTRRVAVAETTVDGREVAVASIHLSWWDKGFQEEWARIEERFQSIG 205 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223 I+ + + D+ + T+ Y+ + +RI Sbjct: 206 KPIILAGDFNNPAGREGYQTILASPLKLQDSFQVAQKTNGSYTVGPGIDGWKGNEEPLRI 265 Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHT 255 D++ S E ++ + + SDH Sbjct: 266 DYVFASQEWA--VNRLSVIFDGNNQSLVSDHY 295 >gi|164655745|ref|XP_001729001.1| hypothetical protein MGL_3789 [Malassezia globosa CBS 7966] gi|159102890|gb|EDP41787.1| hypothetical protein MGL_3789 [Malassezia globosa CBS 7966] Length = 473 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 46/317 (14%), Positives = 88/317 (27%), Gaps = 53/317 (16%) Query: 1 MSVVTVATWNVNSIR----ARIHNLAAW---IKENNPDIICLQETKTEDKNFPFETLQ-- 51 MS + V T N +R R LAA + + + D+I LQE Sbjct: 64 MSELRVLTLNCWGLRFFSKLRKERLAAISDRLADTHYDVIALQEIWVRIAGLAAHARSFV 123 Query: 52 --SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLP-------------GDDLDVQARFIE 96 + Y +G+AI+++Y + + TH+ R Sbjct: 124 ATDIPYGKFFLTGAFGSGLAIMTRYPIVSMETHMFRLTGTPIYVQEGDWIAGKACGRITM 183 Query: 97 ATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI 156 A + + + G + + + + + + ++ GD N Sbjct: 184 AHPQLGLVDVYTSHFTAHGGQSGPEIQRVYRTTEAFELAQKCTASAQAGRHVLCMGDLNS 243 Query: 157 IPQPHDCY------------NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL 204 +P + + +N + Sbjct: 244 LPSSLCMALLQSVGGLQDALAHVHNGDSGADITCDSPKNTWSKNKKIDQYAQQHGGKCLD 303 Query: 205 YSFWDYYADSWSKNKGIRIDHIMLSPE--ATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 Y Y + N+ R+ + S E T L+ S ++ SDH + V Sbjct: 304 Y--VLYRGPA---NRMSRLSY--SSHEVTFTDLIDSLQVSY--------SDHFGLEVVFS 348 Query: 263 IPEPRKKQQDSTSQNMK 279 I P + S+ + Sbjct: 349 IVSPEDGKISGGSKKFE 365 >gi|115947205|ref|XP_797066.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] gi|115961731|ref|XP_001190128.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] Length = 1060 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 43/290 (14%), Positives = 81/290 (27%), Gaps = 38/290 (13%) Query: 8 TWNVNSIRARIHNLAAWIKE--NNPDI--ICLQETKTEDKNFPF-ETLQSLNYHIETCGQ 62 TWNVN + +L W+ PD+ I QE + F F ++++ +H Sbjct: 406 TWNVNG-KGATEDLRNWLAADPKPPDMYAIGFQELDLSKEAFLFNDSIREEEWHKRVIMC 464 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL---------------R 107 +GV I K + + L E + Sbjct: 465 LHQDGVYIKLKLIRLVGMMLLVFIQERHYPYIDEVIAGTVGTGIMGKMGNKGAVAVRFNF 524 Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167 + + + + + + A + E E + + N Sbjct: 525 HNTSFCFINSHLAAHMEEYERRNQDYHDICARMKFEREHHQPLGVMQHDVVIWMGDLNYR 584 Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW----SKNKGIRI 223 I + A T++ + + D + + ++ +D + N G Sbjct: 585 IN-DLAVDTVKTLIYNNSFKELLMQDQLNRQRELSRVFKGFDEAPIGFLPTYKYNSGS-- 641 Query: 224 DHIMLS-----PEATSLLH---SARIDTKPRG--WTKPSDHTPVIVSLDI 263 D S P + + + R + SDH PV DI Sbjct: 642 DEWDSSEKQRVPAWCDRILHRGACIVPKVYRSHMKLRLSDHKPVSALYDI 691 >gi|50307403|ref|XP_453680.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49642814|emb|CAH00776.1| KLLA0D13860p [Kluyveromyces lactis] Length = 941 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 52/303 (17%), Positives = 96/303 (31%), Gaps = 47/303 (15%) Query: 8 TWNVNSIRARIHNLAAWIK--ENNPD--IICLQET---------------KTEDKNFPFE 48 T+NVN + L W+K +PD +I L+E KT + Sbjct: 528 TFNVNG-KLSKEKLEGWLKPENESPDLYVIGLEEIVELSPGHMLATDPYIKTFWEKKLLS 586 Query: 49 TLQSLN---YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDV-------QARFIEAT 98 + S N YH Q + + + + + H+ GD I Sbjct: 587 EINSYNDKKYHAVFNSQLGGLALLVFTDEENKSRIKHIEGDMKKTGFGGISSNKGAIAVH 646 Query: 99 FTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP 158 ++ +L G +++D S K R++ + +I+ GD+N Sbjct: 647 LWLSNTKFCFVVSHLSAGLENVEQRHNDYKSIAKHIRFSKGTRIKDHDGVIWMGDFNFRI 706 Query: 159 QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF-WDYYADSWSK 217 + + L + + G + + ++ ++ D + Sbjct: 707 LLSNDDVRQAIIDKNYHRLFEKDQLNQQMISGESFPFFDEMEITFPPTYKFNPGTDVYDT 766 Query: 218 NKGIRIDHIMLSPEATSLLHS-ARIDTKPRGW----TKPSDHTPV----IVSLD-IPEPR 267 ++ +RI P T + S I + SDH PV L I EP+ Sbjct: 767 SEKMRI------PAWTDRILSRGEILRQELYGSAEDIVFSDHRPVYGLFTAKLTVIDEPK 820 Query: 268 KKQ 270 K + Sbjct: 821 KAK 823 >gi|51950578|gb|AAA70222.2| putative ORF2 [Drosophila melanogaster] Length = 1219 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 40/261 (15%), Positives = 71/261 (27%), Gaps = 48/261 (18%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 MS +T+ WN+ +L IK+ +P II LQET + Y Sbjct: 1 MS-LTIIQWNLKGYLNNYSHLLILIKKYSPHIISLQETHIQ-------------YTNNIP 46 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +Y + ++ + + T+ T+ I + + + + Sbjct: 47 TPINYKLLTNIATNRFGGVR----------LLVHKSIQHTVLNITIDIEAIAINIESKLK 96 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + IS K + + H +P + + Sbjct: 97 LNIFSTYISPTKNITNQTLHNTFNIQQTPSLITGDFNGWHHPWGSPTTNKRGKITHRFID 156 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 L N + Y+ ID + SP + Sbjct: 157 NMHLILLNDKSPTHFSTHN----TYTH---------------IDLTLCSPILAPHAKW-K 196 Query: 241 IDTKPRGWTKPSDHTPVIVSL 261 I G SDH P+I +L Sbjct: 197 ILNDLHG----SDHFPIITTL 213 >gi|295673442|ref|XP_002797267.1| inositol phosphosphingolipids phospholipase C [Paracoccidioides brasiliensis Pb01] gi|226282639|gb|EEH38205.1| inositol phosphosphingolipids phospholipase C [Paracoccidioides brasiliensis Pb01] Length = 521 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 55/343 (16%), Positives = 97/343 (28%), Gaps = 65/343 (18%) Query: 4 VTVATWNVNSIRA----RIHNLAAW---IKENN--PDIICLQETKTEDK--NFPFETLQS 52 +++ T N ++ R L I +N P I+ LQE T++ N ET + Sbjct: 13 ISILTLNCWGLKFLSKYRHERLLEIGKRIAGSNNPPHIVGLQECWTQEDYNNIRRETQEI 72 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ---TLRIG 109 L Y G+AILSK+ E + A F F +RIG Sbjct: 73 LPYGKFYYSGIFGGGLAILSKWPIEESTMFAYPLNGRPTAFFRGDWFVGKGVACARIRIG 132 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIF------------AGDYNII 157 + + + E + GD+N++ Sbjct: 133 PASTDIADVFCTHLHAPYEREPHDSYICHRTAQAWEIVKMMRAAAEKGHLVIGLGDFNML 192 Query: 158 PQ--------------PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHH 203 PQ + A + + + F Sbjct: 193 PQSLAHRLITSHAPVKDVWSHLHPDSSIGAAIDAAEMARKKPIPSADFNVLENGATCDGI 252 Query: 204 LYSF-WDYYADSWSKNKG-------------IRIDHIML--------SPEATSLLHSARI 241 ++ W+ + K +G R+D+I + S + SAR+ Sbjct: 253 FNTWRWNKTQQNRLKREGNIVVDGELADPLAKRLDYIFVGDGAFGHFSSPKKWTISSARV 312 Query: 242 ---DTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 + P SDH V ++ + + + + PI Sbjct: 313 GMMERHPTLHCSLSDHFSVEATIVLDTSKDSDAEDEQNSFLPI 355 >gi|171676872|ref|XP_001903388.1| hypothetical protein [Podospora anserina S mat+] gi|170936503|emb|CAP61163.1| unnamed protein product [Podospora anserina S mat+] Length = 380 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 21/75 (28%), Positives = 30/75 (40%), Gaps = 5/75 (6%) Query: 188 NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS--LLHSARIDTKP 245 + D RA H T Y++ W + R+D I+ S L+ S I P Sbjct: 304 CLDAIDVFRALHRTERRYTYHP-RTAHWGSSSD-RVDLILASKRLWEEGLVLSTGILDSP 361 Query: 246 RGWTKPSDHTPVIVS 260 + PSDH P+ V Sbjct: 362 Q-ERGPSDHVPLWVE 375 >gi|328881833|emb|CCA55072.1| hypothetical protein SVEN_1785 [Streptomyces venezuelae ATCC 10712] Length = 248 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 36/264 (13%), Positives = 76/264 (28%), Gaps = 34/264 (12%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 +V+ V ++NV S+R LA I+ +PD++ +QE Sbjct: 17 AVLRVLSYNVRSMRDDEDALARVIRACDPDLVFVQE-------------------APRFF 57 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 + + + +K + + + + L + G Sbjct: 58 RWRKHAARLAAKSELVMLSGGATAAGPMLLCSLRATVERTEDVLLPLTPGLHRRGLATAV 117 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 ++ + Q + + + P+ + E R+ Sbjct: 118 VRFAGARVGLVSCHLSLRQDERYAQAGMVLDRVAALGTPYALVAGDLNEG--PGGPAFRR 175 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 ++LQ+ H + + RID I+ +P L Sbjct: 176 LAKELQDGWEVSPWGGEHTST-------------PADPHQRIDAILATPGVEFLGCGVPT 222 Query: 242 DTKPRGWTKPSDHTPVIVSLDIPE 265 D P +DH PV+ ++ +P Sbjct: 223 DLDPADLRAATDHLPVLAAVRVPA 246 >gi|327405504|ref|YP_004346342.1| Endonuclease/exonuclease/phosphatase [Fluviicola taffensis DSM 16823] gi|327321012|gb|AEA45504.1| Endonuclease/exonuclease/phosphatase [Fluviicola taffensis DSM 16823] Length = 375 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 50/278 (17%), Positives = 86/278 (30%), Gaps = 45/278 (16%) Query: 9 WNVNSIRARI---------------HNLAAWIKENNPDIICLQETKTEDK-------NFP 46 WNV S R+ +N+ +I+E NPD++C QE +DK + Sbjct: 105 WNVMSYNVRLFDVYNSSLAGRNESRNNIVKYIQEVNPDVVCFQEFFHQDKPSSFSTRDTL 164 Query: 47 FETLQSLNYH---IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 + L YH + G+ +LSKY I + + I A Sbjct: 165 IDLLDYKYYHERYSHRIRNRQNFGICMLSKYPIIAKGDVMFENFKTTDNYCIFADIVKGD 224 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 T+R N++L + + ++ RL +++ I + + Sbjct: 225 DTIRFYNIHLQSIKLQQEDYELFGEKNKQAGGKKSTARLLIDKLRIAYPERAEQAERVVE 284 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI-- 221 + + N +D + SF + G Sbjct: 285 HLKTSPYPVVICGDFNDTPMSYVYNQFNSDLVD---------SFRETQTGIGITYVGRVP 335 Query: 222 --RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257 RID+I S + + +I P SDH V Sbjct: 336 AGRIDYIFHSGDLG--AVNFQIQAVPY-----SDHRAV 366 >gi|171914576|ref|ZP_02930046.1| Endonuclease/exonuclease/phosphatase [Verrucomicrobium spinosum DSM 4136] Length = 804 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 44/290 (15%), Positives = 85/290 (29%), Gaps = 59/290 (20%) Query: 3 VVTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQET-----KTEDKNFPFETLQS 52 V+ V ++N +S R +A I +PD++ +QE ++ ++ + Sbjct: 549 VLRVMSYNAHSCIGMDGRVSPRRIARVINHYSPDLVAVQELEHGRSRSRGEDQATRVAEL 608 Query: 53 LNYHIETCGQ----KSYNGVAILSKYQPIEIVTH----LPGDDLDVQARFIEATFTINTQ 104 Y + C G A+LS+ + T PG+ I T+ Q Sbjct: 609 TGYEVVFCPTVTRAAERYGHALLSRRPVEVVKTGLLPADPGNWWPEPRSAIWVRTTLEGQ 668 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 + + +L + + + + EP++ GD+N Sbjct: 669 VVNMVATHLGLSSR------ERVAQMLSLLGPDWLGPVVETEPVVLCGDFNFGVGSPGYK 722 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRID 224 I D + + ++ IR+D Sbjct: 723 LAITALRDVQSITKGWRPVNTFSSLQPF----------------------------IRLD 754 Query: 225 HIMLSPEATSLLHSARIDTKPRGW--TKPSDHTPVIVSLDIPEPRKKQQD 272 H+ +S T PR SDH P++ L + + Sbjct: 755 HVFISSHFT-----VEKLRVPRTQVTRVASDHLPLVADLRLSSSAAAETT 799 >gi|163753635|ref|ZP_02160758.1| Endonuclease/exonuclease/phosphatase [Kordia algicida OT-1] gi|161325849|gb|EDP97175.1| Endonuclease/exonuclease/phosphatase [Kordia algicida OT-1] Length = 269 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 31/270 (11%), Positives = 68/270 (25%), Gaps = 31/270 (11%) Query: 4 VTVATWNVNSI----RAR-IHNLAAWIKENNPDIICLQET-----KTEDKNFPFETLQSL 53 +T+ +WN+ A I +A +K DII +QE + N E L+ Sbjct: 21 ITIISWNIQHFGKTKNAEEIEKIAEIVKH--ADIIAIQEVVTTFQGVQAVNRLTEALEKK 78 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 + + N + +++ I + ++ + + + Y+ Sbjct: 79 GESWDYLISEKTNSPSRMTECYAIVWKNKHIKIKKGHEGSLVKELDKMVDREPFLVQFYV 138 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + + R + A Sbjct: 139 ADTSFFVMNYHAKPHKRNPRPEVKELLAYVQKNYKNKKFILAGDFNLSQSEEVFKNFKLA 198 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 F L+ + + + Y+ ++ S + Sbjct: 199 GFKPVNIDQKTTLKLICKNASYLNYPIDNIFYT---PKINA-------------TSTKII 242 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + T R + SDH PV + + Sbjct: 243 DFVKHCDNLTASR---RLSDHLPVELKFRL 269 >gi|15678949|ref|NP_276066.1| hypothetical protein MTH929 [Methanothermobacter thermautotrophicus str. Delta H] gi|2622027|gb|AAB85427.1| unknown [Methanothermobacter thermautotrophicus str. Delta H] Length = 231 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 38/269 (14%), Positives = 83/269 (30%), Gaps = 49/269 (18%) Query: 4 VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + V TWN+N RA R L +++ E D QE P E NYH Sbjct: 3 LKVLTWNLN--RASYRRRKLWSYMGELEFDAGFFQEVYM----IPNEVR--WNYHTFRGE 54 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 + L D+ ++ ++ I +L + ++Y G Sbjct: 55 MNTLLLHKDLMLDSMKR-NYLEISDNHCIEDFYVSCRIEIGGNSLSLFSIYNYIG--PAD 111 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + + + + + ++ + + +++ + Sbjct: 112 SDFSEFLDLLYNYIEEGEDLIIIGGDFNINKNFSPSLRRLAL-----------------L 154 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR- 240 + + + + ++F + ID++ + + Sbjct: 155 AEEMTGRLSELGFRDVLREEEDPFTFMTPNGGKYQ------IDYLFVPEGV--KILDVWH 206 Query: 241 ------IDTKPRGWTKPSDHTPVIVSLDI 263 I+T+PR SDH P++V+L+I Sbjct: 207 PPAGEIIETRPR----LSDHIPLMVTLEI 231 >gi|313159654|gb|EFR59012.1| endonuclease/exonuclease/phosphatase family protein [Alistipes sp. HGB5] Length = 250 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 39/265 (14%), Positives = 69/265 (26%), Gaps = 51/265 (19%) Query: 4 VTVATWNV-NSIRAR-----IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57 V ++N+ N R + +A I PD++ LQE Sbjct: 28 VKFMSYNIRNG-RGADDVQDLGRIAEVIGRVAPDVVALQE-------------------- 66 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 NG I + + + +D + L + + LP Sbjct: 67 VDSVTGRMNGRFIPEELGRMTGMHARFCRAIDYDGGGYGIGLLSRAEPLSVRRIPLPGRE 126 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + ++ + + L + +DA L Sbjct: 127 EARVLLMAEFPGYVVCVTHLSLSPEDQRASLPIIRQATDTCRKPVLLAGDFNMDDAEEVL 186 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 + + + + IRID+I+ L Sbjct: 187 GGLGGEFRPLSDTAQLTFPSDRPS-------------------IRIDYILG----RGLPQ 223 Query: 238 SARI-DTKPRGWTKPSDHTPVIVSL 261 SA+I + T SDH P+ VSL Sbjct: 224 SAKIAERTVDYTTVASDHCPLWVSL 248 >gi|242068985|ref|XP_002449769.1| hypothetical protein SORBIDRAFT_05g022920 [Sorghum bicolor] gi|241935612|gb|EES08757.1| hypothetical protein SORBIDRAFT_05g022920 [Sorghum bicolor] Length = 705 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 2/42 (4%) Query: 4 VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTEDK 43 + +A WN + A + L + K DI+ L ET+ +K Sbjct: 1 MKIAVWNCRGLNNSAAVRGLLNFQKSEGVDILFLSETRMTEK 42 >gi|18309402|ref|NP_561336.1| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens str. 13] gi|18144078|dbj|BAB80126.1| hypothetical protein [Clostridium perfringens str. 13] Length = 263 Score = 45.9 bits (107), Expect = 0.006, Method: Composition-based stats. Identities = 38/269 (14%), Positives = 76/269 (28%), Gaps = 20/269 (7%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQE----TKTEDKNFPFETLQSLN 54 + + T N +S +I LA I E D+I LQE K L+ N Sbjct: 1 MKLLTLNCHSWLEEEQLYKIKYLAKTIVEEKYDVIALQEASQSIKAS---IKEGNLKEDN 57 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 Y + + + KY + +H+ D + + +N+++ I + Sbjct: 58 YGLVLIEEINK---LGGEKYHLVWDYSHIGYDIYEEGLCILTKHKIVNSESFYISKSHCK 114 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 + ++ + H + Sbjct: 115 TFWRSRKIVKATIDINNENIDFYSCHMGWWHDKEESFTFQVENLLAHAKESKNRAFFMGD 174 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD--SWSKNKG-IRIDHIMLSPE 231 F + + I + S + W N G +RID I + Sbjct: 175 FNNNAFLKNEGYDFLKSNGLIDTYDLAENKDSGVTVNKNIAGWEDNTGELRIDIIFTNRN 234 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 + ++ +R+ + SDH + + Sbjct: 235 --TKVYDSRVIFNGKNKEVVSDHFGLEIE 261 >gi|269963240|ref|ZP_06177574.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269832045|gb|EEZ86170.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 317 Score = 45.9 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 35/272 (12%), Positives = 72/272 (26%), Gaps = 36/272 (13%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEI----- 79 ++ NPDII LQE + ++ + Y C + + + + Sbjct: 47 FEQLNPDIIGLQEVFSIEE--TKTFFAEMGYEHFACVDTPHIEGDYICSRPVVAVASRFP 104 Query: 80 ---------------VTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124 + L + +L P ST Sbjct: 105 IESFEAVTFDKDTLNAFGDIDAPPFSRKPVRACVVHPIIGHLSVYVTHLKSQRPADSTTP 164 Query: 125 DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ 184 ++ I R+L + E + + + ++ + Sbjct: 165 EEASRPIARWLSTQQRGWEAAMLRDVMQRQYALNSMPTVLMGDMNQGITSTSV-NNVLTE 223 Query: 185 KLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL--------- 235 + + + S A + KG +D+I+LS E + Sbjct: 224 HYGDSVTDLQLNDGWELQVTPSLESRPATHYHFAKGNVLDYILLSQEFDAHADVSIAEVT 283 Query: 236 ---LHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 + A I+ SDH V ++++I Sbjct: 284 NYQVLDAHLINPSFERDKNASDHAFVALTVEI 315 >gi|118377424|ref|XP_001021891.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena thermophila] gi|89303658|gb|EAS01646.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena thermophila SB210] Length = 368 Score = 45.9 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 50/294 (17%), Positives = 90/294 (30%), Gaps = 43/294 (14%) Query: 4 VTVATWNV---------NSIRAR-IHNLAAWIK----ENNPDIICL----QETKTEDKNF 45 + + T+NV N I +R I+ E +PD++ L QE K D Sbjct: 35 LKIGTYNVLFGMPSKILN-IYSRNKKRFTHIIENIIPETDPDVLSLMEVTQEFK--DMLL 91 Query: 46 PFETLQSLNY--HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 ++ Y H+ Q+ V ++SK I + F + Sbjct: 92 SNPYIRQNYYVSHVSKIYQRRLFEVFVISKQPFTSIYLVDSKQGRYQFSIFHNQE--VWK 149 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 + I S + + R + I Sbjct: 150 SFILISTHLWAGEGDFGSRQKQLSLVNQCILDRNFLNSRHIN------DTIKQIANIAIQ 203 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK------ 217 N II + D + + + GF D R + Y+ WD +++ Sbjct: 204 NNNIILQGDLNLHMRHEDA--YIYENGFIDTYREIYPFQDGYT-WDSAQNNFINSVFIFD 260 Query: 218 NKGIRIDHIMLSPEA-TSLLHSARIDTKPRGWTK--PSDHTPVIVSLDIPEPRK 268 ++ +R+D I+L + +I K + SDH ++ L I E + Sbjct: 261 DRRMRLDRILLRKSCNLFQIQDVKILGKEKIGIGLCASDHYLLLSILKINENPQ 314 >gi|301761530|ref|XP_002916188.1| PREDICTED: nocturnin-like [Ailuropoda melanoleuca] Length = 452 Score = 45.9 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 39/265 (14%), Positives = 70/265 (26%), Gaps = 30/265 (11%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFE--TLQSLNYHIETCGQKSYNGVAILSKYQPIE 78 + I +PDI+CLQE D F L L Y + S +E Sbjct: 199 ILEEILAYHPDILCLQEV---DHYFDTFQPLLGRLGYQGTFFPKP-------WSPCLDVE 248 Query: 79 IVTHLPGD--DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 G + + I + + + + + + L+ Sbjct: 249 HNNGPDGCALFFLQNRFKLVNSANIRLTAMTLKTNQVAIAQTLECKESSRQFCIAVTHLK 308 Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV----RQSFQKLQNMGFT 192 N+ H P+I D + L Sbjct: 309 ARPGWERFRSAQGCDLLQNLQNITHGAKVPLIVCGDFNAEPTEEVYKHFASSSLNLSSAY 368 Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA-RIDTKPR----- 246 + A + Y+ W ++ +D+I S A + SA + T+ + Sbjct: 369 KLLSADGQSEPPYTTWKIRTSGECRHT---LDYIWYSQHAL-RVRSALDLLTEEQIGPNR 424 Query: 247 --GWTKPSDHTPVIVSLDIPEPRKK 269 + PSDH ++ E Sbjct: 425 LPSFNYPSDHLSLVCDFSFNEEEPD 449 >gi|299755652|ref|XP_001828796.2| hypothetical protein CC1G_06782 [Coprinopsis cinerea okayama7#130] gi|298411320|gb|EAU93062.2| hypothetical protein CC1G_06782 [Coprinopsis cinerea okayama7#130] Length = 443 Score = 45.9 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 30/78 (38%), Gaps = 16/78 (20%) Query: 4 VTVATWNV--------------NSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPF 47 + + TWN+ N ++ R + I+ + D++CLQE DK P Sbjct: 65 LKILTWNILAQCLVRRELFPTSNCLKVGQREPMIHQEIQRLDADVLCLQEVDRMDKLGPM 124 Query: 48 ETLQSLNYHIETCGQKSY 65 +Y T +K + Sbjct: 125 LEAAGYSYRYATGPKKLH 142 >gi|241997776|ref|XP_002433537.1| hypothetical protein IscW_ISCW001771 [Ixodes scapularis] gi|215490960|gb|EEC00601.1| hypothetical protein IscW_ISCW001771 [Ixodes scapularis] Length = 104 Score = 45.9 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNP-DIICLQETKTE 41 + + WN +R+R L E P D++ LQET+T+ Sbjct: 10 IRILQWNCRGLRSRRDELTIRFAELEPCDVLLLQETRTD 48 >gi|168212665|ref|ZP_02638290.1| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens CPE str. F4969] gi|168216494|ref|ZP_02642119.1| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens NCTC 8239] gi|170715660|gb|EDT27842.1| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens CPE str. F4969] gi|182381400|gb|EDT78879.1| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens NCTC 8239] Length = 263 Score = 45.9 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 38/269 (14%), Positives = 76/269 (28%), Gaps = 20/269 (7%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQE----TKTEDKNFPFETLQSLN 54 + + T N +S +I LA I E D+I LQE K L+ N Sbjct: 1 MKLLTLNCHSWLEEEQLYKIKYLAKTIVEEKYDVIALQEASQSVKAS---IKEGNLKEDN 57 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 Y + + + KY + +H+ D + + +N+++ I + Sbjct: 58 YGLVLIEEINK---LGGEKYHLVWDYSHIGYDIYEEGLCILTKHKIVNSESFYISKSHCK 114 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 + ++ + H + Sbjct: 115 TFWRSRKIVKATIDINNENIDFYSCHMGWWHDKEESFTFQVENLLAHAKESKNRAFFMGD 174 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD--SWSKNKG-IRIDHIMLSPE 231 F + + I + S + W N G +RID I + Sbjct: 175 FNNNAFLKNEGYDFLKSNGLIDTYDLAENKDSGVTVNKNIAGWEDNTGELRIDIIFTNRN 234 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 + ++ +R+ + SDH + + Sbjct: 235 --TKVYDSRVIFNGKNKEVVSDHFGLEIE 261 >gi|149031532|gb|EDL86499.1| similar to putative TRAF and TNF receptor associated protein, isoform CRA_d [Rattus norvegicus] Length = 184 Score = 45.9 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 9/44 (20%) Query: 2 SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQET 38 S ++ TWN++ + RAR + + + +PD++ LQE Sbjct: 118 STISFITWNIDGLDGCNLPERAR--GVCSCLALYSPDVVFLQEV 159 >gi|148700526|gb|EDL32473.1| Traf and Tnf receptor associated protein, isoform CRA_c [Mus musculus] Length = 232 Score = 45.9 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 9/44 (20%) Query: 2 SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQET 38 S ++ TWN++ + RAR + + + +PD++ LQE Sbjct: 122 STISFITWNIDGLDGCNLPERAR--GVCSCLALYSPDVVFLQEV 163 >gi|148700529|gb|EDL32476.1| Traf and Tnf receptor associated protein, isoform CRA_f [Mus musculus] Length = 188 Score = 45.9 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 9/44 (20%) Query: 2 SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQET 38 S ++ TWN++ + RAR + + + +PD++ LQE Sbjct: 122 STISFITWNIDGLDGCNLPERAR--GVCSCLALYSPDVVFLQEV 163 >gi|110802553|ref|YP_697748.1| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens SM101] gi|110683054|gb|ABG86424.1| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens SM101] Length = 263 Score = 45.9 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 38/269 (14%), Positives = 76/269 (28%), Gaps = 20/269 (7%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQE----TKTEDKNFPFETLQSLN 54 + + T N +S +I LA I E D+I LQE K L+ N Sbjct: 1 MKLLTLNCHSWLEEEQLYKIKYLAKTIVEEKYDVIALQEASQSIKAS---IKEGNLKEDN 57 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 Y + + + KY + +H+ D + + +N+++ I + Sbjct: 58 YGLILIEEINK---LGGEKYHLVWDYSHIGYDIYEEGLCILTKHKIVNSESFYISKSHCK 114 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 + ++ + H + Sbjct: 115 TFWRSRKIVKATIDINNENIDFYSCHMGWWHDKEESFTFQVENLLAHAKESKNRAFFMGD 174 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD--SWSKNKG-IRIDHIMLSPE 231 F + + I + S + W N G +RID I + Sbjct: 175 FNNNAFLKNEGYDFLKSNGLIDTYDLAENKDSGVTVNKNIAGWEDNTGELRIDIIFTNRN 234 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 + ++ +R+ + SDH + + Sbjct: 235 --TKVYDSRVIFNGKNKEVVSDHFGLEIE 261 >gi|1335196|emb|CAA26917.1| unnamed protein product [Homo sapiens] Length = 268 Score = 45.9 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 49/246 (19%), Positives = 83/246 (33%), Gaps = 32/246 (13%) Query: 33 ICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQA 92 +C+QET ++ ++ + G++ GVAIL + T D + Sbjct: 8 LCIQETHLTCRDTHRLEIKGWRNIYQANGKQKKAGVAILVSDKTDFKPT---KIKRDKEG 64 Query: 93 RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG 152 +I A +I + L I N+Y P+ K + + +L+ I G Sbjct: 65 HYIMAKGSIQEEELTILNIYAPNTGAPRFIKQ-----------VLSDLQRDLDAHTIIMG 113 Query: 153 DYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYA 212 D+N D D ++ L D R H Y+F+ Sbjct: 114 DFNTPLSTLDRSTRQKVNKDI------QELDSALHQADLIDIYRTLHPKSTEYTFFSAPH 167 Query: 213 DSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQD 272 ++SK DHI+ S S T SDH+ + + L I + Q Sbjct: 168 HTYSKT-----DHIVGSKALLSKCKRTETITNCL-----SDHSAIKLELRI--KKLTQNH 215 Query: 273 STSQNM 278 S + + Sbjct: 216 SATWKL 221 >gi|311265022|ref|XP_003130450.1| PREDICTED: protein angel homolog 2-like [Sus scrofa] Length = 544 Score = 45.9 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 18/108 (16%), Positives = 34/108 (31%), Gaps = 5/108 (4%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73 R N+ IK + D++CLQE ++ ++ E L+SL YH E + Sbjct: 200 RFPNILKEIKHFDADVLCLQEV--QEDHYGTEIRPSLESLGYHCEYKMRTGKKPDGCAIC 257 Query: 74 YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 ++ + + L + +P Sbjct: 258 FKHSKFSLLSVNPVEFFRPNVPLLDRDNVGLVLLLQPKSPSAASPAIC 305 >gi|254470152|ref|ZP_05083556.1| endonuclease/exonuclease/phosphatase family protein [Pseudovibrio sp. JE062] gi|211960463|gb|EEA95659.1| endonuclease/exonuclease/phosphatase family protein [Pseudovibrio sp. JE062] Length = 346 Score = 45.9 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 33/247 (13%), Positives = 73/247 (29%), Gaps = 33/247 (13%) Query: 18 IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPI 77 L I++ PD+I QET + ++ Y I +K + Sbjct: 130 KEALQELIEKRQPDLIVFQETASATPRLQAFLRENYQYAILPPEKKDTDLTVFSKFPLEN 189 Query: 78 EIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF 137 +PG + + +N +I + +P + + + + +++ + Sbjct: 190 SKRNLVPGLGFNGYIPREFLSADVNVNGRKIQLYAIHPASPRSKRRLNGRTTYVDYVSKH 249 Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA 197 + ++ D + + L ++ + Sbjct: 250 IQKHRTDTPIMVL--------------------GDWNTPVWSDTFQKLLADLKLKTTFTS 289 Query: 198 THDTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTP 256 Y + + + K G ++DHI S + + I G SDH P Sbjct: 290 FVPQTTRY-----FINPFLGKVLGSKVDHITSSEKII--IKDLMI-----GEDVGSDHFP 337 Query: 257 VIVSLDI 263 + +L I Sbjct: 338 IFATLHI 344 >gi|126331541|ref|XP_001377893.1| PREDICTED: similar to CCR4 carbon catabolite repression 4-like [Monodelphis domestica] Length = 376 Score = 45.9 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 42/266 (15%), Positives = 80/266 (30%), Gaps = 30/266 (11%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFE--TLQSLNYHIETCGQKSYNGVAILSKYQPIE 78 + I PDI+CLQE D F L L Y + S +E Sbjct: 124 ILEEILAYQPDILCLQEV---DHYFDTFQPLLSRLGYQGTFFPKP-------WSPCLDVE 173 Query: 79 IVTHLPGD--DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 G + + I + + + + K L+ Sbjct: 174 HNNGPDGCALFFLQSRFALVNSTNIRLTAMTLKTNQVAIAQTLECRKTGRLFCIAVTHLK 233 Query: 137 FASQR--LELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF--QKLQNMGFT 192 + + + I Q + + + +A T EV + F L Sbjct: 234 ARTGWERFRSAQGSDLLQNLQSITQGAEIPLIVCGDFNAEPTEEVYRHFASSSLNLSSAY 293 Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA-RIDTKPR----- 246 + A + Y+ W + ++ +D+I S +A + SA + T+ + Sbjct: 294 KLLSADGQSEPPYTTWKIRSSGECRHT---LDYIWYSRQAL-HVRSALGLLTEEQIGPNR 349 Query: 247 --GWTKPSDHTPVIVSLDIPEPRKKQ 270 + PSDH ++ E +++ Sbjct: 350 LPSFNYPSDHLSLVCDFSFNEDQERP 375 >gi|299756331|ref|XP_001829256.2| inositol phosphorylsphingolipid-phospholipase C [Coprinopsis cinerea okayama7#130] gi|298411628|gb|EAU92582.2| inositol phosphorylsphingolipid-phospholipase C [Coprinopsis cinerea okayama7#130] Length = 434 Score = 45.9 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 43/283 (15%), Positives = 74/283 (26%), Gaps = 27/283 (9%) Query: 17 RIHNLAAWIKENNPDIICLQET-------KTED---KNFPFETLQ-----SLNYHIETCG 61 RI +A + N DII LQE K ++ K P I T Sbjct: 32 RIEAIAHELSTLNHDIIALQEIWVHSDYQKVQERVSKRLPHAKFFYSGALGAGLAIFTRY 91 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 V S V A + + + +L+ G Sbjct: 92 PIISTSVVPYSLNGAPIDVAAGDWFVGKAAASVVILHPILGQVQVFNTHLFAKGGEDGPE 151 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 ++ F + A Q E+ +I GD+N IP + + Sbjct: 152 FLRAHRLVGAWEFAKLARQAAEVGRYVIALGDFNSIPPTLPMSIILNHASLTDAWTATHP 211 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM-------LSPEATS 234 ++ H + A G R+D+ + S + Sbjct: 212 GYESGPVPKTALEAVERHGITADSPLNTWSAGKRPHGWGKRLDYCLYRQPVRHASDKPVP 271 Query: 235 --LLHSARI---DTKPRGWTKPSDHTPVIVSLDIPEPRKKQQD 272 ++ + P SDH + +L+I + Sbjct: 272 NLRATDCKVVFTEHVPGYTFSFSDHFGLEATLEIETSMADMPN 314 >gi|255601665|ref|XP_002537723.1| conserved hypothetical protein [Ricinus communis] gi|223515316|gb|EEF24660.1| conserved hypothetical protein [Ricinus communis] Length = 287 Score = 45.9 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 11/38 (28%), Positives = 19/38 (50%), Gaps = 4/38 (10%) Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 D + ++ + L +D G T+ SDH P++V L Sbjct: 253 DFVFVTEDLRMRLRRCEVD----GATRASDHQPILVEL 286 Score = 39.0 bits (89), Expect = 0.80, Method: Composition-based stats. Identities = 11/41 (26%), Positives = 20/41 (48%), Gaps = 6/41 (14%) Query: 4 VTVATWNVNSIRARIH--NLAAWIKEN----NPDIICLQET 38 + + +WNV R+ NL + E + D++C+QE Sbjct: 1 MRLISWNVQWGRSAHGDVNLTRTLDEARRLVDFDVLCMQEV 41 >gi|323456026|gb|EGB11893.1| hypothetical protein AURANDRAFT_70680 [Aureococcus anophagefferens] Length = 789 Score = 45.9 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 3/52 (5%) Query: 214 SWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 W+ N RIDH++L+ + ++ R + SDH PV L + + Sbjct: 741 CWTHNPLFRIDHVLLNDGLR---RACDVENYRRVESAASDHFPVAFDLTLRD 789 >gi|320158919|ref|YP_004191297.1| putative phospholipase C [Vibrio vulnificus MO6-24/O] gi|319934231|gb|ADV89094.1| putative phospholipase C [Vibrio vulnificus MO6-24/O] Length = 442 Score = 45.9 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 33/283 (11%), Positives = 72/283 (25%), Gaps = 43/283 (15%) Query: 4 VTVATWNVNSIRA-------RIHNLAAWIKENNPDIICLQETKTE-DKNFPFETLQSLNY 55 + + T+N+ ++ A R + ++K D++ LQE F E + Y Sbjct: 178 LKIMTYNIWALPAIASHIGERFELIPDYVK--GYDVLALQEVFANGRDAFLRELAKEYPY 235 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + + +N + + I Sbjct: 236 QTKMLDKDGFNIFDGGVIIVSRYPIVNQAQFIFPDCTGTDCFADKGVNYAEVIK------ 289 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + + ++ + ++ A I Y+ N Sbjct: 290 -GGEAYHVFATHTASYDTDTARDYRQRQFKQMRALAQSLKIPANETVVYSGDFNVNK--- 345 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYS--FWDYYADSWS-------KNKGIRIDHI 226 + A + Y+ +D ++++ +N +D++ Sbjct: 346 ------RKFPGDYQQMIANLSAIEPHYSGYTESTFDPRINNFAGEPLSGGENVEY-LDYV 398 Query: 227 MLSPEAT---SLLHSARIDT----KPRGWTKPSDHTPVIVSLD 262 M+S E + I SDH PV L Sbjct: 399 MVSNEYAVKGDNNNRVDIPRSTAESLWKHYNLSDHFPVSTVLK 441 >gi|302144127|emb|CBI23232.3| unnamed protein product [Vitis vinifera] Length = 961 Score = 45.9 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 38/294 (12%), Positives = 73/294 (24%), Gaps = 58/294 (19%) Query: 1 MSVVTVATWNVNSIR------ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 +S + + ++NV R R+ L I+ ++PD+IC QE Sbjct: 690 LSSLKILSYNVW-FREDLEMDKRMQALGDLIQLHSPDLICFQEV------------TPNI 736 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 Y + L + + + I L Sbjct: 737 YDVFQQSCW---WKVYRCSVPNEMAHLRPYFCMLLSKLPVKSFSCKRFSN--SIMGRELC 791 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 ++ + + D NP + Sbjct: 792 IAELEVQAGKPLVLATSHLESPCPAPPKWDQMYSKERVDQAKEALNLLTKNPNVIFGGDM 851 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI--RIDHIMLSPEA 232 E L + DA + +++ S N+ + R+D M Sbjct: 852 NWDEKSDGQFPLPDGWV-DAWADLRPGENGWTYDTKSNQMLSGNRTLQKRLDRFMC---- 906 Query: 233 TSLLHSARI------------------DTKPRGWTK-------PSDHTPVIVSL 261 LH +I + K R + PSDH +++++ Sbjct: 907 --RLHDFKISKIDMIGMEPIPGLSYCKEKKVRKEMQQLVLPVLPSDHYGLLLTI 958 >gi|325106309|ref|YP_004275963.1| Endonuclease/exonuclease/phosphatase [Pedobacter saltans DSM 12145] gi|324975157|gb|ADY54141.1| Endonuclease/exonuclease/phosphatase [Pedobacter saltans DSM 12145] Length = 287 Score = 45.9 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 30/247 (12%), Positives = 62/247 (25%), Gaps = 11/247 (4%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80 ++ IK DI+ QE + L + + G Y+ + Sbjct: 52 ISDIIKFYEFDILGTQEGFAHQLEDLKKVLPNYGEYGVGRDDGKNTGEQSAIFYRKDKFD 111 Query: 81 THLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQ 140 G + + + R+ + L Y + Sbjct: 112 LLDSGSFWLSETPEKPSFGWDAQKYRRVCSWILLKDKKTKKKLY-----CYNAHYDHQAN 166 Query: 141 RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHD 200 E + + + + + N+ F + Sbjct: 167 IARKESSKLILEKIKNMRKGTPVILTGDFNGNPST---EWYKEIAQSNVLFDTYSQTPIK 223 Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 ++ +Y ++ IDHI + + + I + PSDH PVI Sbjct: 224 LEGNPTYQEY-GNAELLKGNDVIDHIFTTKDF--KVKKWGILSNTFHGKYPSDHFPVITF 280 Query: 261 LDIPEPR 267 L+ + Sbjct: 281 LEWNSKK 287 >gi|149914631|ref|ZP_01903161.1| endonuclease/exonuclease/phosphatase family protein [Roseobacter sp. AzwK-3b] gi|149811424|gb|EDM71259.1| endonuclease/exonuclease/phosphatase family protein [Roseobacter sp. AzwK-3b] Length = 210 Score = 45.9 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 36/253 (14%), Positives = 62/253 (24%), Gaps = 48/253 (18%) Query: 22 AAWIKENNPDIICLQET--KT--EDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPI 77 I D++ LQE + P + ++ +HI GQ + Sbjct: 1 MRVINALQADVVVLQEVDKRLAPRPAALPHDMVEEEGWHILPFGQPGGSL---------- 50 Query: 78 EIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF 137 + I T + + L + I L Sbjct: 51 --------GWHGNAMLVRDGVQAIETAHIELPGLEPRGAIRADLDTPIGALRVIGLHLGL 102 Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA 197 + L+ I + P P + + + L A R Sbjct: 103 VRRYRLLQLGAINRALRQLPPMPTVFAGDFNEWGNGAALDAAVKLVRFLPAAASYPAPRP 162 Query: 198 THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257 +D I LSP+ S+ + R SDH PV Sbjct: 163 VAP----------------------LDRIALSPDLL--ALSSGVHRG-RPAHIASDHLPV 197 Query: 258 IVSL-DIPEPRKK 269 L +P+ ++ Sbjct: 198 WADLAALPQKGRE 210 >gi|36030946|ref|NP_653168.2| protein angel homolog 2 [Homo sapiens] gi|114572546|ref|XP_514187.2| PREDICTED: hypothetical protein isoform 2 [Pan troglodytes] gi|74746929|sp|Q5VTE6|ANGE2_HUMAN RecName: Full=Protein angel homolog 2 gi|55665690|emb|CAH71920.1| angel homolog 2 (Drosophila) [Homo sapiens] gi|119613772|gb|EAW93366.1| angel homolog 2 (Drosophila), isoform CRA_b [Homo sapiens] gi|221040606|dbj|BAH11980.1| unnamed protein product [Homo sapiens] Length = 544 Score = 45.9 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 5/63 (7%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73 R N+ IK + D++CLQE ++ ++ E L+SL YH E + Sbjct: 200 RFPNILKEIKHFDADVLCLQEV--QEDHYGAEIRPSLESLGYHCEYKMRTGRKPDGCAIC 257 Query: 74 YQP 76 ++ Sbjct: 258 FKH 260 >gi|2251234|gb|AAB62717.1| probable nocturnin protein [Mus musculus] Length = 323 Score = 45.9 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 35/262 (13%), Positives = 68/262 (25%), Gaps = 28/262 (10%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFE--TLQSLNYHIETCGQKSYNGVAILSKYQPIE 78 + I PDI+CLQE D F L L Y + S +E Sbjct: 71 ILEEILAYQPDILCLQEV---DHYFDTFQPLLSRLGYQGTFFPKP-------WSPCLDVE 120 Query: 79 IVTHLPGD--DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 G + ++ I + + + + + + L+ Sbjct: 121 HNNGPDGCALFFLQNRFKLISSTNIRLTAMTLKTNQVAIAQTLECKESGRQFCIAVTHLK 180 Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN----MGFT 192 + N+ P+I D + Sbjct: 181 ARTGWERFRSAQGCDLLQNLQNITQGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAY 240 Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR------ 246 + + Y+ W ++ +D+I S A S+ + + T+ + Sbjct: 241 KLLSPDGQSEPPYTTWKIRTSGECRHT---LDYIWYSRHALSVTSALDLLTEEQIGPNRL 297 Query: 247 -GWTKPSDHTPVIVSLDIPEPR 267 + PSDH ++ E Sbjct: 298 PSFHYPSDHLSLVCDFSFNEEP 319 >gi|323138553|ref|ZP_08073621.1| Endonuclease/exonuclease/phosphatase [Methylocystis sp. ATCC 49242] gi|322396187|gb|EFX98720.1| Endonuclease/exonuclease/phosphatase [Methylocystis sp. ATCC 49242] Length = 319 Score = 45.9 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 16/54 (29%) Query: 1 MSVVTVATWNVNSI-------------RARIHNLAAWIKENNPDIICLQETKTE 41 M+ + +AT+N+ ++ RA L + + + DI+CLQE + Sbjct: 1 MNEMRLATFNLENLDWAPGRPEAFARRRAA---LLPLLDDIDADILCLQEIDAQ 51 Score = 36.3 bits (82), Expect = 4.8, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 18/49 (36%), Gaps = 7/49 (14%) Query: 223 IDHIMLSPEATSLLHSARIDT----KPRGWTKPSD---HTPVIVSLDIP 264 IDHI+ S ++ S I P D H PV+ +I Sbjct: 270 IDHILASHALAAMWRSTAILNAGLQDEFYAKDPIDGSLHAPVMAMFEIS 318 >gi|262383334|ref|ZP_06076470.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. 2_1_33B] gi|262294232|gb|EEY82164.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. 2_1_33B] Length = 304 Score = 45.9 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 39/283 (13%), Positives = 91/283 (32%), Gaps = 35/283 (12%) Query: 2 SVVTVATWNV--NSIRARIH--NLAAWIKENNPDIICLQETKTEDKN------FPFETLQ 51 + V V+++N+ N++ ++ A I+ + DI+ +QE +++ P E + Sbjct: 26 ATVKVSSFNIWLNTLGGKLPPSQTAKVIEASQTDIVGIQEGHIYEEDGIKHDHVP-EIAE 84 Query: 52 SLNYHIETCGQKSYN-------GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 SL +H+ G+ Y I++ + +I Sbjct: 85 SLGFHLFNQGEGHYILSRYPVVDSTASRYGVKIQVGKDKFCWMFNCHLYYIPYQPYQLNG 144 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 ++ + + + R+ + Q ++ P+ GD+N + Sbjct: 145 IPYGDYPFIDTEEEAVWFANEARREEVTRYQKDIQQVMKEGYPVFLTGDFNEP--SFLDW 202 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH---HLYSFWDYYADSWSKNKGI 221 + + + +G D+ R H Y++ ++ + Sbjct: 203 TQRAADAGIHKIKVEWPATKAFSEIGMNDSYRTIHPDEVSTPGYTWTPVPSEQEILD--- 259 Query: 222 RIDHIMLSPEATSLLHSARI------DTKPRGWTKPSDHTPVI 258 R+D ++ S + + I + PSDH V Sbjct: 260 RLDFVLYSG---CKVTDSFITGESEATSDVVVSPYPSDHRMVT 299 >gi|114321996|ref|YP_743679.1| endonuclease/exonuclease/phosphatase [Alkalilimnicola ehrlichii MLHE-1] gi|114228390|gb|ABI58189.1| Endonuclease/exonuclease/phosphatase [Alkalilimnicola ehrlichii MLHE-1] Length = 276 Score = 45.9 bits (107), Expect = 0.007, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 33/96 (34%), Gaps = 14/96 (14%) Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 + + + D H L++F + +N IDHI+LS Sbjct: 189 HRHVIVMGDFNCHSRSPEFTTLVDRTELLEPVHDLHTFPSWKP---QRN----IDHILLS 241 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 + R+ P SDH P+ + + +PE Sbjct: 242 SSLE--VGHVRVLDYPL-----SDHLPITMDISLPE 270 >gi|306829190|ref|ZP_07462380.1| RgfB protein [Streptococcus mitis ATCC 6249] gi|304428276|gb|EFM31366.1| RgfB protein [Streptococcus mitis ATCC 6249] Length = 271 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 29/272 (10%), Positives = 73/272 (26%), Gaps = 14/272 (5%) Query: 4 VTVATWNVNSI--RARIHNLAAWIKEN---NPDIICLQETK-------TEDKNFPFETLQ 51 + T N +S + +++ + D+IC QE E + Sbjct: 1 MKFLTLNTHSWMEKEAEEKFQLLLQDILDKDYDLICFQEINQEITSPEVEVNDLYQALPA 60 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 + H + + +A + + G D + I + I + + + ++ Sbjct: 61 AEPIHQDHYVRLLVEKLAEKGRSYYWTWAYNHIGYDRYHEGVAILSKTPIEAREILVSDV 120 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 P + K + ++ ++ + Sbjct: 121 DDPTDYHTRRVALVETEVEGKELALASVHLSWWDKGFQEEWARFEAVLKDLKKPLLLAGD 180 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 + + DA + Y+ + +RID++ + E Sbjct: 181 FNNPAGQEGYQAILASPLELQDAFEVAKERSGSYTVPPEIDGWKGNTEPLRIDYVFTTKE 240 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + S + + + SDH + L+ Sbjct: 241 LE--VESLHVVFDGQNGPQVSDHYGLNAILNW 270 >gi|168204400|ref|ZP_02630405.1| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens E str. JGS1987] gi|170663976|gb|EDT16659.1| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens E str. JGS1987] Length = 263 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 37/269 (13%), Positives = 75/269 (27%), Gaps = 20/269 (7%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQE----TKTEDKNFPFETLQSLN 54 + + T N +S +I LA I E D+I LQE K L+ N Sbjct: 1 MKLLTLNCHSWLEEEQLYKIKYLAKIIVEEKYDVIALQEASQSIKAS---IKEGNLKEDN 57 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 Y + + +Y + +H+ D + + +N+++ I + Sbjct: 58 YGLILIEEIKK---LGGEEYHLVWDYSHIGYDIYEEGLCILTKHKIVNSESFYISKSHSK 114 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 + ++ + H + Sbjct: 115 TFWRSRKIVKATIDINNENIDFYSCHMGWWHDKDESFTFQVENLLAHAKESKNRAFFMGD 174 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD--SWSKNKG-IRIDHIMLSPE 231 F + + I + S + W N G +RID I + Sbjct: 175 FNNNAFLKNEGYDFLKSNGLIDTYDLAENKDSGVTVNKNIAGWEDNTGELRIDIIFTNRN 234 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 + ++ +R+ + SDH + + Sbjct: 235 --TKVYDSRVIFNGKNKEVVSDHFGLEIE 261 >gi|325108266|ref|YP_004269334.1| endonuclease/exonuclease/phosphatase [Planctomyces brasiliensis DSM 5305] gi|324968534|gb|ADY59312.1| Endonuclease/exonuclease/phosphatase [Planctomyces brasiliensis DSM 5305] Length = 320 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 35/266 (13%), Positives = 73/266 (27%), Gaps = 24/266 (9%) Query: 11 VNSIRARIHNLAAWIKENNPDIICLQET--KTEDKNFPFETLQSLNY-HIETCGQKSYNG 67 VNS+R R+ A I+ N DI+ L E + L + Y H+ + G Sbjct: 60 VNSVRERMGKDAEVIRHLNADILGLAEVENRALLNRLVKGYLSNEGYKHVVLIEGEDSRG 119 Query: 68 VAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDK 127 + + + + + L + + + + + + Sbjct: 120 IDVALLSRFPCFAQSVDIEGLPRDLLACRFSMRGQVFYVVVNHWKSRRDGGGGDVRLNGG 179 Query: 128 ISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQ 187 + + R + P+I GD+N P+ + ++ L Sbjct: 180 RAMQEFVSRTVREYEGQAVPVIAMGDFNDEPEDASFAPMRQAGMVSTMDSLAQEDRWTLG 239 Query: 188 NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML-SPEATSLLH--------S 238 + + + + ++ G+R + + Sbjct: 240 YYDRDASRMDLLCFDQI-----WITPNLQQSPGMR----WVRTEVVRPRFMINDRRQFNG 290 Query: 239 ARI---DTKPRGWTKPSDHTPVIVSL 261 RI R SDH PV + Sbjct: 291 VRIPLPIDDYRDRIGYSDHYPVKATF 316 >gi|296116207|ref|ZP_06834825.1| Endonuclease/exonuclease/phosphatase [Gluconacetobacter hansenii ATCC 23769] gi|295977313|gb|EFG84073.1| Endonuclease/exonuclease/phosphatase [Gluconacetobacter hansenii ATCC 23769] Length = 234 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 22/129 (17%), Positives = 44/129 (34%), Gaps = 11/129 (8%) Query: 2 SVVTVATWNVNSIR---ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 + + V +WN+ +R A + ++ I + PD++ +QE + P ++ Sbjct: 33 NSIRVVSWNL--LRQIGATVRDIVHLIHQEKPDLLLMQEATVDIDALPTLIG---GHYAR 87 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + +GVA S + L I I N++L HG Sbjct: 88 SPLPGRIHGVACWSPWPY---RRPPMTCTLPSGTLIRRVAQIIECGPFAIANVHLSHGQL 144 Query: 119 ITSTKYDDK 127 + + Sbjct: 145 LNRRQLRRM 153 >gi|262282134|ref|ZP_06059903.1| RgfB [Streptococcus sp. 2_1_36FAA] gi|262262588|gb|EEY81285.1| RgfB [Streptococcus sp. 2_1_36FAA] Length = 271 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 31/252 (12%), Positives = 70/252 (27%), Gaps = 13/252 (5%) Query: 18 IHNLAAWIKENNPDIICLQETK--TEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75 ++ LA I + D+ICLQE E + Q + + + Sbjct: 21 LNQLAERILQEKYDVICLQEVNQLMESEQVVQAPFYQAVEGAIAIHQDHFALCLVKKLTE 80 Query: 76 PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKR-- 133 + + E ++ L + + N + Sbjct: 81 AGLDYHWSWAYNHIGFDIYNEGVTILSKNPLTPKEVLVSEVNDPRDYHTRKVLLAETEVE 140 Query: 134 -FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192 L + F G+++ + + + + +Q + + Sbjct: 141 GQLMTIASCHLSWWDKGFQGEWSKLEEELVKVKTPLVLMGDFNNPVDYEGYQHI--LKSP 198 Query: 193 DAIRATHDTHHLYSFWDYYADS---WSKNK-GIRIDHIMLSPEATSLLHSARIDTKPRGW 248 ++ +H S + W N+ ++ID+I S + S+ + + Sbjct: 199 LKLQDSHKVARKISGKATVEGAIAGWDGNQDALKIDYIFTSQGI--QIESSAVVFDGKET 256 Query: 249 TKPSDHTPVIVS 260 SDH + V Sbjct: 257 PVVSDHFGIEVE 268 >gi|148703245|gb|EDL35192.1| CCR4 carbon catabolite repression 4-like (S. cerevisiae), isoform CRA_a [Mus musculus] Length = 609 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 35/262 (13%), Positives = 68/262 (25%), Gaps = 28/262 (10%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFE--TLQSLNYHIETCGQKSYNGVAILSKYQPIE 78 + I PDI+CLQE D F L L Y + S +E Sbjct: 357 ILEEILAYQPDILCLQEV---DHYFDTFQPLLSRLGYQGTFFPKP-------WSPCLDVE 406 Query: 79 IVTHLPGD--DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 G + ++ I + + + + + + L+ Sbjct: 407 HNNGPDGCALFFLQNRFKLISSTNIRLTAMTLKTNQVAIAQTLECKESGRQFCIAVTHLK 466 Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN----MGFT 192 + N+ P+I D + Sbjct: 467 ARTGWERFRSAQGCDLLQNLQNITQGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAY 526 Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR------ 246 + + Y+ W ++ +D+I S A S+ + + T+ + Sbjct: 527 KLLSPDGQSEPPYTTWKIRTSGECRHT---LDYIWYSRHALSVTSALDLLTEEQIGPNRL 583 Query: 247 -GWTKPSDHTPVIVSLDIPEPR 267 + PSDH ++ E Sbjct: 584 PSFHYPSDHLSLVCDFSFNEEP 605 >gi|281340342|gb|EFB15926.1| hypothetical protein PANDA_005445 [Ailuropoda melanoleuca] Length = 525 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 5/63 (7%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73 R N+ IK + D++CLQE ++ ++ E L+SL YH E + Sbjct: 181 RFPNILKEIKHFDADVLCLQEV--QEDHYGAEIRPSLESLGYHCEYKMRTGRKPDGCAIC 238 Query: 74 YQP 76 ++ Sbjct: 239 FKH 241 >gi|254458118|ref|ZP_05071544.1| endonuclease/exonuclease/phosphatase [Campylobacterales bacterium GD 1] gi|207084954|gb|EDZ62240.1| endonuclease/exonuclease/phosphatase [Campylobacterales bacterium GD 1] Length = 336 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 45/290 (15%), Positives = 80/290 (27%), Gaps = 64/290 (22%) Query: 18 IHNLAAWIKENNPDIICLQETKTED--KNFPFETLQ---SLNYHIETCGQKSYNGVAILS 72 + N+A IK+ + DII LQE + K+ F Q Y+ + + VAILS Sbjct: 60 LQNIARVIKDIDADIIALQEIHSLQALKDLRFTLKQNGLYYQYYSIADKKHTAIKVAILS 119 Query: 73 KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH---------------GN 117 K L +E I L + + N Sbjct: 120 KLPFTY-SKELSVTSTYKYRNILETKLKIYGNDLYMFVNHWKAKSGPESMRITSAKSLRN 178 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 I+ YD+ I + F + ++ ++ H + + Sbjct: 179 RISEIGYDENIVLLGDFNSDYEEHIKFKKNRKLNDTNGKTGINHVLRTIKQNQKASNTKY 238 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL-- 235 E + + D + YS+ + + + +D+I++S Sbjct: 239 EKENLYNLWYDT----------DAPNRYSYI-FRGEKEA------LDNIIVSQPLLDKKG 281 Query: 236 ----------------LHSARIDTKPRGWTK--------PSDHTPVIVSL 261 +I + SDH PVI Sbjct: 282 ISYINDSITNLDKEYLFKKKQIYRWQVSKERVPKHKGAGYSDHLPVIAKF 331 >gi|315185421|gb|EFU19193.1| Endonuclease/exonuclease/phosphatase [Spirochaeta thermophila DSM 6578] Length = 311 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 31/269 (11%), Positives = 69/269 (25%), Gaps = 48/269 (17%) Query: 17 RIHNLAAWIKENNPDIICLQET---KTEDKNFPFETLQSLNYHIETCGQKS---YNGVAI 70 R+ ++ ++ + D++ LQE + L Y ++ + V Sbjct: 60 RLEAVSRVVRSLDADVLILQEVENERVL-GRLVSGYLADAGYRWHFLPEEEGAVHVAVLS 118 Query: 71 LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISW 130 + + + +++ Q G + P + + Sbjct: 119 RIPVEGVRVHALKDPRVAVLRSVVEVEYRLGGEQVFLFGVHLISRAGPAWRDEIRRNQLF 178 Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG 190 + +R ++ GD+N+ + + ++ + + Sbjct: 179 LIARRLEEIRRTAPGAHVLVGGDFNMEADEVETFFDRALFPQDVHSVWSMMVPGTMPSG- 237 Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS----LLHSARI----- 241 S+W Y W RID + + + Sbjct: 238 ---------------SYW--YEGRWE-----RIDGFFFTEGLRDGVGLDVTGGEVMAFPW 275 Query: 242 DTKPRG---------WTKPSDHTPVIVSL 261 RG + SDH PV V L Sbjct: 276 LLDERGRPWSWDMGTGSGYSDHLPVKVIL 304 >gi|227819964|ref|YP_002823935.1| endonuclease/exonuclease/phosphatase family protein [Sinorhizobium fredii NGR234] gi|36958668|gb|AAQ87136.1| Dioxygenase [Sinorhizobium fredii NGR234] gi|227338963|gb|ACP23182.1| putative Endonuclease/Exonuclease/phosphatase family protein [Sinorhizobium fredii NGR234] Length = 264 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 10/56 (17%), Positives = 24/56 (42%), Gaps = 3/56 (5%) Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQ 276 +R+DH+ + + + + SDH P++ L++ P ++ +Q Sbjct: 201 LRLDHVFVGDGI--NVGDCTVHSSALARV-ASDHLPILAELEVEPPVRQWAPRAAQ 253 >gi|58532025|emb|CAD41563.3| OSJNBa0006A01.18 [Oryza sativa Japonica Group] Length = 1189 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 34/271 (12%), Positives = 81/271 (29%), Gaps = 34/271 (12%) Query: 6 VATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + +WNV + AR + + + + + C QETK + + Y ++ K Sbjct: 7 LISWNVRGLNSPARCNVVHELMLDTKCTLACFQETKLQSIDDGLARFLG-GYKLDKFAFK 65 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 G + + + + T + T + +Y P + + + Sbjct: 66 PARGTRGGILLLWSSGDFDVQEVRIGRFSISAQITDIRSGVTFLLTGVYGPTRHHLKDSF 125 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 +I + +N++ L + F Sbjct: 126 LRHIRRLRPSPGEGW-----------------LILGDFNMIYRARDKNNSNLNLARMRRF 168 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + + + I + +++ ++ K +++D + E + Sbjct: 169 RAVIDRCELHEIPLQN---RKFTW----SNERRKATLVKLDRCFCNEEWDLAFPHHVLHA 221 Query: 244 KPRGWTKPSDHTPVIVSLDIPEPRKKQQDST 274 P G PSDH P++ + P+ + T Sbjct: 222 LPTG---PSDHYPLV----LSNPQGPHRPRT 245 >gi|73960892|ref|XP_547407.2| PREDICTED: hypothetical protein XP_547407 [Canis familiaris] Length = 544 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 5/63 (7%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73 R N+ IK + D++CLQE ++ ++ E L+SL YH E + Sbjct: 200 RFPNILKEIKHFDADVLCLQEV--QEDHYGAEIRPSLESLGYHCEYKMRTGRKPDGCAIC 257 Query: 74 YQP 76 ++ Sbjct: 258 FKH 260 >gi|254229945|ref|ZP_04923347.1| endonuclease/exonuclease/phosphatase family [Vibrio sp. Ex25] gi|262394659|ref|YP_003286513.1| putative phospholipase C [Vibrio sp. Ex25] gi|151937514|gb|EDN56370.1| endonuclease/exonuclease/phosphatase family [Vibrio sp. Ex25] gi|262338253|gb|ACY52048.1| putative phospholipase C [Vibrio sp. Ex25] Length = 442 Score = 45.5 bits (106), Expect = 0.007, Method: Composition-based stats. Identities = 39/283 (13%), Positives = 82/283 (28%), Gaps = 43/283 (15%) Query: 4 VTVATWNVNSIRA-------RIHNLAAWIKENNPDIICLQETKTE-DKNFPFETLQSLNY 55 + + T+N+ ++ A R + ++K D++ LQE + F E + Y Sbjct: 178 LKLMTYNIWALTAIASHIGDRYELIPQYVK--GYDVLALQEVFASGREAFLRELAKEYPY 235 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + ++ N + + + I H Sbjct: 236 QTKMLDKEGVNIHDGGVIIVSRYPIVNEAQYVFPDCSGTDCFADKGVNYAEIIKGGQAYH 295 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + +D + R + ++ A NI Y+ N Sbjct: 296 VFATHTASFDTDTAREYRQ-------RQFKQIRALAKSLNIPSSETVVYSGDFNVNK--- 345 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYS--FWDYYADSWS-------KNKGIRIDHI 226 + A + Y+ +D ++++ +N +D++ Sbjct: 346 ------RKFPGDYQQMIANLSAIEPQYSGYTESTFDPRINNFAGEALSGGENVEY-LDYV 398 Query: 227 MLSPEA-TSLLHSARID----TKPRGWTK--PSDHTPVIVSLD 262 M+S E + R+D T W SDH PV ++ Sbjct: 399 MVSSEYGVKSFNDNRVDVPRTTSESLWKHYNLSDHFPVSATIK 441 >gi|327441388|dbj|BAK17753.1| predicted extracellular nuclease [Solibacillus silvestris StLB046] Length = 1177 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 30/77 (38%), Gaps = 10/77 (12%) Query: 200 DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT---KPSDHTP 256 +S++ + N + +DHI++S + I + SDH P Sbjct: 997 PVEDRFSYY------FQGNNQV-LDHILVSNNLAEVTEIDMIHINANFTEAQGRASDHDP 1049 Query: 257 VIVSLDIPEPRKKQQDS 273 V+V +D+ + + + Sbjct: 1050 VLVQIDLKSGKDETPEP 1066 >gi|242825122|ref|XP_002488375.1| hypothetical protein TSTA_108090 [Talaromyces stipitatus ATCC 10500] gi|218712193|gb|EED11619.1| hypothetical protein TSTA_108090 [Talaromyces stipitatus ATCC 10500] Length = 169 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 18/58 (31%), Gaps = 4/58 (6%) Query: 209 DYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEP 266 + + ID I+ S + I G SDH + D+P P Sbjct: 110 TWQGRGQGGDYKSTIDLILASENLIDSIVKCAIH----GTEHSSDHRAIETVFDVPRP 163 >gi|162147750|ref|YP_001602211.1| endonuclease/exonuclease/phosphatase family protein [Gluconacetobacter diazotrophicus PAl 5] gi|209542375|ref|YP_002274604.1| endonuclease/exonuclease/phosphatase [Gluconacetobacter diazotrophicus PAl 5] gi|161786327|emb|CAP55909.1| putative endonuclease/exonuclease/phosphatase family [Gluconacetobacter diazotrophicus PAl 5] gi|209530052|gb|ACI49989.1| Endonuclease/exonuclease/phosphatase [Gluconacetobacter diazotrophicus PAl 5] Length = 235 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 33/261 (12%), Positives = 66/261 (25%), Gaps = 68/261 (26%) Query: 5 TVATWNVNSIR---ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + +WN+ +R A ++ I++ PD++ +QE +F ++ + Sbjct: 35 KIVSWNL--LRLVGASPRDVIHLIEQERPDLLLMQE---ATSDFDALPHLIGGHYARSPL 89 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +GVA S + R + + + N++L HG + Sbjct: 90 PGRIHGVACWSPSPFRRQPLTCTLPSGPLVRRVAQM-IECASFAFTVANVHLSHGQIMNR 148 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + + + ++P D Sbjct: 149 RQLRRLGEILPAHAAVLGDFNLVGPT--------LMPHFRDVGPRAPTHRMVDMVP---- 196 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 IRID ++ AR+ Sbjct: 197 ---------------------------------------IRIDRCLV-RGL--SCTEARV 214 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 SDH P+ V L+ Sbjct: 215 LDNYT-----SDHCPITVRLE 230 >gi|71281061|ref|YP_269348.1| extracellular ribonuclease/nuclease fusion protein [Colwellia psychrerythraea 34H] gi|71146801|gb|AAZ27274.1| extracellular ribonuclease/nuclease fusion protein [Colwellia psychrerythraea 34H] Length = 1310 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 55/325 (16%), Positives = 95/325 (29%), Gaps = 77/325 (23%) Query: 4 VTVATWNV----NS-------IRAR-IHNLAAW----------IKENNPDIICLQETKTE 41 + VA++NV N AR L + +KE N DI+ L E E Sbjct: 932 LKVASFNVLNYFNGDGAGQGFPTARGADTLEEFTRQSSKIVSALKEINADIVGLME--LE 989 Query: 42 DKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI 101 + F + I ++ + V + T + GD + V + AT I Sbjct: 990 NDGFDSNSA------IADLVKQLNSQVGEGTYNYVSLDQTGVGGDAIAVGIIYKPATVGI 1043 Query: 102 NTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161 + GN + +I+ + + +G+ Sbjct: 1044 VGNAVTTNQSPFDFGNRQPLVQTFKEIASNEELTIAVNHFKSKGSCGSASGNNLDQGDGQ 1103 Query: 162 DCYNP-----------IIWENDACFTLEVRQSFQKLQNMGFTDAIR-----ATHDTHHLY 205 C+N + + + L G D I H+ Y Sbjct: 1104 GCWNELRTQAANGLTAWLNTKPTGTSDDDFLIIGDLNAYGKEDPINAITNSNYHNLVADY 1163 Query: 206 ---SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT----KPR------------ 246 + + Y S+ G +DH + S + S + + +PR Sbjct: 1164 MGSTGYSY---SFGGEIGY-LDHALASDKLASQVVDTTVWHINADEPRIFDYNTEYKSSE 1219 Query: 247 --------GWTKPSDHTPVIVSLDI 263 + SDH PVIV L++ Sbjct: 1220 QLSTYFAEDAYRASDHDPVIVVLNL 1244 >gi|257453584|ref|ZP_05618874.1| endonuclease/exonuclease/phosphatase [Enhydrobacter aerosaccus SK60] gi|257449042|gb|EEV23995.1| endonuclease/exonuclease/phosphatase [Enhydrobacter aerosaccus SK60] Length = 262 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 35/272 (12%), Positives = 75/272 (27%), Gaps = 35/272 (12%) Query: 2 SVVTVATWNV-------NSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + + ++N+ N R ++ +AA + + DIICLQE + ++ L Sbjct: 13 NSLIITSYNIHKGMSPLN--RFVKMEGIAAALDQVQSDIICLQEVQGQN----------L 60 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLP--GDDLDVQARFIEATFTINTQTLRIGNL 111 ++ + +Y +E + + + I Sbjct: 61 KRVVKYNEFPDQSQHEWFGEYLQLENSYGKNVEYNHGHHGNAVLSRHPLDPKHNVNITVS 120 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 L + L +E + + I D P+I Sbjct: 121 RLEQRGVLHCEIQPIGWHTPIIVLCAHLNLMENDREKQYEVMSQYINNEIDQSTPLILAG 180 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 D ++ + + +K + +D I + Sbjct: 181 DFNDWKKLSCQKLGCDLNLQEAVLTHHGKLLPTF---------PAKLPVLSLDRIYV-RN 230 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +H A + W+ SDH PV + + Sbjct: 231 L--QVHRAWVHKGQ-PWSNLSDHLPVSAEVSL 259 >gi|298229615|ref|ZP_06963296.1| metal-dependent hydrolase [Streptococcus pneumoniae str. Canada MDR_19F] gi|298255811|ref|ZP_06979397.1| metal-dependent hydrolase [Streptococcus pneumoniae str. Canada MDR_19A] gi|298502544|ref|YP_003724484.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pneumoniae TCH8431/19A] gi|298238139|gb|ADI69270.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pneumoniae TCH8431/19A] Length = 271 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 30/264 (11%), Positives = 69/264 (26%), Gaps = 14/264 (5%) Query: 4 VTVATWNVNSI--RARIHNL---AAWIKENNPDIICLQETK-------TEDKNFPFETLQ 51 + T N +S + I E + D+IC QE E + Sbjct: 1 MKFLTLNTHSWMEKEAEEKFQILLEDILEKDYDLICFQEINQEITSPEVEVNDLYQALPA 60 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 + H + + + K + G D + I + I + + + ++ Sbjct: 61 AELIHQDHYVRLLVEKLLEQGKNYYWTWAYNHIGYDRYHEGVAILSKTPIEAREILVSDV 120 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 P + + K + ++ ++ + Sbjct: 121 DDPTDYHTRRVALAETVVDGKELAVASVHLSWWDKGFQEEWARFEAVLKKLNKPLLLAGD 180 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 + +G DA + Y+ + +RID++ + E Sbjct: 181 FNNPAGQEGYQAILASPLGLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTTKE 240 Query: 232 ATSLLHSARIDTKPRGWTKPSDHT 255 + + + + SDH Sbjct: 241 LA--VENLHVVFDGNKSPQVSDHY 262 >gi|328946887|gb|EGG41024.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis SK1087] Length = 749 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 28/72 (38%), Gaps = 10/72 (13%) Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT---K 250 + HD YS++ Y + S +D+I +S A + + Sbjct: 600 NLMQEHDAADRYSYF-YRGSNQS------LDNIFISKNLAGKAVFAPVHINASFMEEHGR 652 Query: 251 PSDHTPVIVSLD 262 SDH PV+V LD Sbjct: 653 ASDHDPVVVQLD 664 >gi|327474564|gb|EGF19969.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis SK408] Length = 749 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 28/72 (38%), Gaps = 10/72 (13%) Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT---K 250 + HD YS++ Y + S +D+I +S A + + Sbjct: 600 NLMQEHDAADRYSYF-YRGSNQS------LDNIFISKNLAGKAVFAPVHINASFMEEHGR 652 Query: 251 PSDHTPVIVSLD 262 SDH PV+V LD Sbjct: 653 ASDHDPVVVQLD 664 >gi|327470461|gb|EGF15917.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis SK330] Length = 749 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 28/72 (38%), Gaps = 10/72 (13%) Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT---K 250 + HD YS++ Y + S +D+I +S A + + Sbjct: 600 NLMQEHDAADRYSYF-YRGSNQS------LDNIFISKNLAGKAVFAPVHINASFMEEHGR 652 Query: 251 PSDHTPVIVSLD 262 SDH PV+V LD Sbjct: 653 ASDHDPVVVQLD 664 >gi|327462051|gb|EGF08380.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis SK1057] Length = 720 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 28/72 (38%), Gaps = 10/72 (13%) Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT---K 250 + HD YS++ Y + S +D+I +S A + + Sbjct: 571 NLMQEHDAADRYSYF-YRGSNQS------LDNIFISKNLAGKAVFAPVHINASFMEEHGR 623 Query: 251 PSDHTPVIVSLD 262 SDH PV+V LD Sbjct: 624 ASDHDPVVVQLD 635 >gi|325695083|gb|EGD36986.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis SK150] Length = 749 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 28/72 (38%), Gaps = 10/72 (13%) Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT---K 250 + HD YS++ Y + S +D+I +S A + + Sbjct: 600 NLMQEHDAADRYSYF-YRGSNQS------LDNIFISKNLAGKAVFAPVHINASFMEEHGR 652 Query: 251 PSDHTPVIVSLD 262 SDH PV+V LD Sbjct: 653 ASDHDPVVVQLD 664 >gi|325687087|gb|EGD29110.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis SK72] Length = 749 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 28/72 (38%), Gaps = 10/72 (13%) Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT---K 250 + HD YS++ Y + S +D+I +S A + + Sbjct: 600 NLMQEHDVADRYSYF-YRGSNQS------LDNIFISKNLAGKAVFAPVHINASFMEEHGR 652 Query: 251 PSDHTPVIVSLD 262 SDH PV+V LD Sbjct: 653 ASDHDPVVVQLD 664 >gi|324991333|gb|EGC23266.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis SK353] Length = 749 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 28/72 (38%), Gaps = 10/72 (13%) Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT---K 250 + HD YS++ Y + S +D+I +S A + + Sbjct: 600 NLMQEHDAADRYSYF-YRGSNQS------LDNIFISKNLAGKAVFAPVHINASFMEEHGR 652 Query: 251 PSDHTPVIVSLD 262 SDH PV+V LD Sbjct: 653 ASDHDPVVVQLD 664 >gi|212691650|ref|ZP_03299778.1| hypothetical protein BACDOR_01145 [Bacteroides dorei DSM 17855] gi|237711947|ref|ZP_04542428.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|237725796|ref|ZP_04556277.1| conserved hypothetical protein [Bacteroides sp. D4] gi|212665839|gb|EEB26411.1| hypothetical protein BACDOR_01145 [Bacteroides dorei DSM 17855] gi|229435604|gb|EEO45681.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4] gi|229454642|gb|EEO60363.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] Length = 281 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 39/268 (14%), Positives = 81/268 (30%), Gaps = 27/268 (10%) Query: 7 ATWNV------NSIRA---RIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYH 56 AT+NV +S+ R + +IK+ DI+ +QE + ++ + Sbjct: 28 ATFNVRYDNPQDSLNNWQYRKDRVCQFIKDRELDIVGMQEVLHNQFQDLRAGLPEYDGIG 87 Query: 57 IETCGQKSYNGVA-ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + K+ A + + E++ + + + + Sbjct: 88 VGRDDGKTAGEYAPLFYRKDKYEVLDSNTFWLAENPDSVGMMGWDAVCVRIATWAKFKDK 147 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + + R S L + + G+ DA Sbjct: 148 ATGKIFMAVNTHFDHVGEEARRQSALLIIRKIKEIVGER------PAVVTGDFNVTDASD 201 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDY-YADSWSKNKGIRIDHIMLSPEATS 234 E + + + + A R T Y+F D+ + K ID I ++P+ Sbjct: 202 AYETITTNEFVMKDAYKTAARV---TGVDYTFHDFARIPAEDCEK---IDFIFVTPQVL- 254 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + + I + SDH P + L+ Sbjct: 255 -VKNCEIPAEV-PEALLSDHNPQLADLE 280 >gi|169343045|ref|ZP_02864073.1| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens C str. JGS1495] gi|169298955|gb|EDS81029.1| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens C str. JGS1495] Length = 263 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 37/269 (13%), Positives = 76/269 (28%), Gaps = 20/269 (7%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQE----TKTEDKNFPFETLQSLN 54 + + T N +S +I LA I E D+I LQE K L+ N Sbjct: 1 MKLLTLNCHSWLEEEQLYKIKYLAKTIVEEKYDVIALQEASQSIKAS---IKEGNLKEDN 57 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 Y + + +Y + +H+ D + + +N+++ I + Sbjct: 58 YGLVLIEEIKK---LGGEEYHLVWDYSHIGYDIYEEGLCILTKHKIVNSESFYISKSHSK 114 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 + + ++ + H + Sbjct: 115 TFWRLRKIVKATIDINNENIDFYSCHMGWWHDKEEIFTFQVENLLAHAKESKNRAFFMGD 174 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD--SWSKNKG-IRIDHIMLSPE 231 F + + I + S + W N G +RID I + Sbjct: 175 FNNNAFLKNEGYDFLKSNGLIDTYDLAENKDSGVTVNKNIAGWEDNTGELRIDIIFTNRN 234 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 + ++ +R+ + SDH + + Sbjct: 235 --TKVYDSRVIFNGKNKEVVSDHFGLEIE 261 >gi|149642963|ref|NP_001092580.1| protein angel homolog 2 [Bos taurus] gi|158706418|sp|A6H7I3|ANGE2_BOVIN RecName: Full=Protein angel homolog 2 gi|148877303|gb|AAI46258.1| ANGEL2 protein [Bos taurus] gi|296478861|gb|DAA20976.1| protein angel homolog 2 [Bos taurus] Length = 544 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 5/63 (7%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73 R N+ IK + D++CLQE ++ ++ E L+SL YH E + Sbjct: 200 RFPNILKEIKHFDADVLCLQEV--QEDHYGTEIRPSLESLGYHCEYKMRTGRKPDGCAIC 257 Query: 74 YQP 76 ++ Sbjct: 258 FKH 260 >gi|23013323|ref|ZP_00053232.1| COG3568: Metal-dependent hydrolase [Magnetospirillum magnetotacticum MS-1] Length = 330 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 18/52 (34%), Gaps = 10/52 (19%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSD----------HTPVIVSLDIP 264 +DHI++S A I + G S H PV+ +P Sbjct: 277 LDHILVSRPLLGWYLGAEIHNETLGDELVSPALVLAPPQSYHAPVVAEFSLP 328 Score = 41.7 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 21/50 (42%), Gaps = 14/50 (28%) Query: 1 MSVVTVATWN--------VNSI----RARIHNLAAWIKENNPDIICLQET 38 M+ + +AT+N V I R + + + DI+CLQE Sbjct: 1 MTPLRIATFNLENLDERPVGGIDFEDRLAV--MRPQFQRLRADILCLQEV 48 >gi|269929041|ref|YP_003321362.1| Endonuclease/exonuclease/phosphatase [Sphaerobacter thermophilus DSM 20745] gi|269788398|gb|ACZ40540.1| Endonuclease/exonuclease/phosphatase [Sphaerobacter thermophilus DSM 20745] Length = 635 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 21/50 (42%), Gaps = 7/50 (14%) Query: 214 SWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +W+ RID+I+ + L I + SDH PV+ L I Sbjct: 591 AWTSEDHRRIDYILATTGIE--LRDIEILDS-----RASDHRPVVARLTI 633 Score = 39.0 bits (89), Expect = 0.83, Method: Composition-based stats. Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 5/40 (12%) Query: 4 VTVATWNV-NSIRA----RIHNLAAWIKENNPDIICLQET 38 +TV T+N+ N + LA I+E +PD++ LQE Sbjct: 409 ITVITYNIQNGFSIDNYFALDALARTIEEVHPDVVVLQEV 448 >gi|237717266|ref|ZP_04547747.1| metallophosphoesterase [Bacteroides sp. D1] gi|229443249|gb|EEO49040.1| metallophosphoesterase [Bacteroides sp. D1] Length = 608 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 36/279 (12%), Positives = 72/279 (25%), Gaps = 60/279 (21%) Query: 3 VVTVATWNV---NSIRARIH------NLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + T+N+ N + +A I +PD++ +QE Sbjct: 22 TLRLMTYNIKNANG----MDDICSFQRVANVINNASPDVVAIQEV--------------- 62 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ-TLRIGNLY 112 +G + H + Q LR+ + Sbjct: 63 ------DSMTRRSGQKYVLGEIAECTQMHACFAPAIEFEGGKYGIGLLAKQVPLRLQTIP 116 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 LP + + +I + + + L + + Sbjct: 117 LPGREEARTLILAEFEDYIYCCTHLSLTEEDRMKSLEIVKSLIASCKKPLFLAGDMNAEP 176 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 ++ Q ++ + A ID+I S + Sbjct: 177 ESDFIKELQKDFQILSNPEKHTYPAPDPKET-------------------IDYIAASKQN 217 Query: 233 TS--LLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKK 269 + + SAR+ +P SDH P++V L E K Sbjct: 218 ATGFAVISARVVNEPM----ASDHRPILVELRTAEKADK 252 >gi|68433741|ref|XP_700794.1| PREDICTED: nocturnin [Danio rerio] Length = 432 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 40/306 (13%), Positives = 79/306 (25%), Gaps = 44/306 (14%) Query: 2 SVVTVATWNV---------NS-IR---------ARIHNLAAWIKENNPDIICLQETKTED 42 S + + WN+ + +R R + + I PD++CLQE D Sbjct: 131 SPLRIMQWNILAQALGEGKDGFVRCPMEALNWSERKYLILEEILTYRPDVVCLQEV---D 187 Query: 43 KNFPFE--TLQSLNYHIETCGQKS------YNGVAILSKYQPIEIVTHLPGDDLDVQARF 94 F L SL Y C + +N ++ Sbjct: 188 HYFDTFQPVLSSLGYQSSFCPKPCSPCLDVHNNNGPDGCALFFNRRRFQMLHTAHLRLSA 247 Query: 95 IEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDY 154 + + + T + W + L+ + + Sbjct: 248 MMLKTNQVAVVATLRCKLTGRVFCVAVTHLKARSGWEAFRSAQGANLLQQLHEITSQSNP 307 Query: 155 NIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN----MGFTDAIRATHDTHHLYSFWDY 210 + P+I D + + T Y+ W Sbjct: 308 EMHQDDQTEGIPLIVCGDFNAEPNEEVYRHFRSSSLGLDSVYKCLSDDRTTEPPYTSWKI 367 Query: 211 YADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR-------GWTKPSDHTPVIVSLDI 263 + +D+I S +A + RI ++ + + PSDH ++ L Sbjct: 368 RPSGECCST---LDYIWYSEKAFEVDAVLRIPSEEQIGPDRLPSFHYPSDHLSLVCDLSF 424 Query: 264 PEPRKK 269 + + Sbjct: 425 SQQPHR 430 >gi|301763641|ref|XP_002917232.1| PREDICTED: LOW QUALITY PROTEIN: protein angel homolog 2-like [Ailuropoda melanoleuca] Length = 546 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 5/63 (7%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73 R N+ IK + D++CLQE ++ ++ E L+SL YH E + Sbjct: 202 RFPNILKEIKHFDADVLCLQEV--QEDHYGAEIRPSLESLGYHCEYKMRTGRKPDGCAIC 259 Query: 74 YQP 76 ++ Sbjct: 260 FKH 262 >gi|297849552|ref|XP_002892657.1| endonuclease/exonuclease/phosphatase family protein [Arabidopsis lyrata subsp. lyrata] gi|297338499|gb|EFH68916.1| endonuclease/exonuclease/phosphatase family protein [Arabidopsis lyrata subsp. lyrata] Length = 444 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 37/291 (12%), Positives = 79/291 (27%), Gaps = 54/291 (18%) Query: 4 VTVATWNVNS-----IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 + + ++NV + R+ + I+ ++P +IC QE + ++ + N+ Sbjct: 176 LKILSYNVWFREDLELNLRMRAIGHLIQLHSPHLICFQEV--TPEI--YDIFRKSNWWKA 231 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 S + Y + + +I + L I + +P G P Sbjct: 232 YSCSVSVDVAVSRGYYCMLLSKLGVKSFSSKSFGN------SIMGRELSIAEVEVPGGKP 285 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + + S + + N Sbjct: 286 L-----------VFATSHLESPCPGPPKWDQMFSRERVEQAKEAIEILRPNTNVIFGGDM 334 Query: 179 VRQSF---QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI--RIDHIMLSPEAT 233 + + D +++ S N+ + R+D I+ Sbjct: 335 NWDDKLDGKFPLADKWVDVWEVMKPGDLGFTYDTKANPMLSGNRALQKRLDRILC--RLD 392 Query: 234 S-LLHSARI-------------DTKPRGWTK-------PSDHTPVIVSLDI 263 L I + K RG K PSDH ++++L + Sbjct: 393 DYKLGGIEIVGKEAIPGLSYEKEKKVRGEIKKLELPVLPSDHFGLLLTLSL 443 >gi|225166446|ref|ZP_03728100.1| endonuclease/exonuclease/phosphatase [Opitutaceae bacterium TAV2] gi|224799314|gb|EEG17887.1| endonuclease/exonuclease/phosphatase [Opitutaceae bacterium TAV2] Length = 313 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 4/58 (6%) Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 ++ YY + + R+D+I++SP + + + P G SDH PV V L Sbjct: 259 TWTHYY--AREETY-SRVDNILVSPALAAAVVRMWVVDSP-GVLVASDHRPVAVELRW 312 >gi|134098128|ref|YP_001103789.1| hypothetical protein SACE_1542 [Saccharopolyspora erythraea NRRL 2338] gi|133910751|emb|CAM00864.1| hypothetical protein SACE_1542 [Saccharopolyspora erythraea NRRL 2338] Length = 305 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 43/277 (15%), Positives = 76/277 (27%), Gaps = 41/277 (14%) Query: 6 VATWNVNSIR--------------ARIHNLAAWIKENNPDIICLQE-----TKTEDKNFP 46 V ++N IR R LA + +P ++ +QE K + P Sbjct: 48 VMSFN---IRYDSKAVPPSPDAWSTRRPILAELLNAESPTLLGVQEALYRQVKQVHADIP 104 Query: 47 FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 +Y G++ +S Y V L D + T+ Sbjct: 105 ------AHYDWIGLGREGGGRGEFMSIYYDTRRVEPLDYDHFWLSDTPNVIGSASWGNTV 158 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 ++ + T ++ + + QR AG +P Sbjct: 159 VRMVTWVRFRDLRTGREFTHVNTHFDHQSENSRQRSAALVRDRIAGFDAGLPVLLTGDFN 218 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226 + + + A +F Y G RID + Sbjct: 219 TRAGDSESYRILTSGGLADGWETAAERLTPAWG------TFGGYEE---PVEGGDRIDWL 269 Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPV--IVSL 261 + + + A I+ + PSDH PV +V L Sbjct: 270 LANDRV--RVLKAAINPFRKDGWFPSDHLPVHALVEL 304 >gi|296230134|ref|XP_002760575.1| PREDICTED: protein angel homolog 2 isoform 1 [Callithrix jacchus] Length = 544 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 5/63 (7%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73 R N+ IK + D++CLQE ++ ++ E L+SL YH E + Sbjct: 200 RFPNILKEIKHFDADVLCLQEV--QEDHYGAEIRPSLESLGYHCEYKMRTGRKPDGCAIC 257 Query: 74 YQP 76 ++ Sbjct: 258 FKH 260 >gi|224102549|ref|XP_002312721.1| predicted protein [Populus trichocarpa] gi|222852541|gb|EEE90088.1| predicted protein [Populus trichocarpa] Length = 493 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 34/251 (13%), Positives = 67/251 (26%), Gaps = 25/251 (9%) Query: 21 LAAWIKENNPDIICLQETKTEDKN---FPFETLQSLNY-HIETCGQKSYNGVAILSKYQP 76 + +KE + DI+ LQ+ K +++ + SL ++ G AILSK+ Sbjct: 219 IMEVLKEVDSDILALQDVKADEEKGMSPLSDLAASLGMKYVFAESWAPGYGNAILSKWPI 278 Query: 77 IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 +D D + + + L H + K + Sbjct: 279 KRWKVQKIANDEDFRNVLKATIYVPWAGEVDFYCTQLDHLDENWRMKQIGAMIKSNDMTP 338 Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIR 196 G + D +EV + + + + Sbjct: 339 HIL----AGGINSLDGSDYSSERWMDIVKYYEDIGKPTPRIEVTKFLKGKGYVDAKEYAG 394 Query: 197 ATHDTHHLYSFWDYYADSWSKN------KGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 + + +N G R+D+++ SP + Sbjct: 395 ECEPVVIV---------AKGQNVQGTCKYGTRVDYMLASPYSPYKFVPGS--YSVISSKG 443 Query: 251 PSDHTPVIVSL 261 SDH V + Sbjct: 444 TSDHHIVKADI 454 >gi|50287091|ref|XP_445975.1| hypothetical protein [Candida glabrata CBS 138] gi|49525281|emb|CAG58894.1| unnamed protein product [Candida glabrata] Length = 436 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 35/311 (11%), Positives = 78/311 (25%), Gaps = 55/311 (17%) Query: 4 VTVATWNVNSI-------RARIHNLAAWIKEN---------------------NPDIICL 35 + T+N + RAR+ LA + + + DI+ L Sbjct: 9 IKFLTFNTWGLKYVSKHRRARLRALAEKLAGHQNSNIKSLPNSEDLYADNDFEDYDIVAL 68 Query: 36 QETKTEDK-----NFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIE------------ 78 QE ++ + + + + Sbjct: 69 QEIWCKEDWDYIVEQCGKIFPYYRWFYSGILSGPGLAILSKIPIESTFLYRYPINGRPSA 128 Query: 79 IVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYD-DKISWIKRFLRF 137 I + + T + + + + Y + F + Sbjct: 129 IHRGDWYVGKSIAITTLRNRENPTTPIVIMNSHMHAPYSLTGDAAYSCHRSCQAWDFAKL 188 Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ----KLQNMGFTD 193 A E ++ GD N P ++ + N Sbjct: 189 AKIYREAGYAVVIVGDLNSRPGSLPHNILTKEAGLIDSWEQLHGKQDLEKIRTMNAMDQL 248 Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK-PRGWTKPS 252 T L ++ A+ ++ R+D+ ++ P + + + T+ G S Sbjct: 249 VYACTTCDSTLNTW---RANRRP-DEACRLDYALVDPRRLTTIKTGIKFTELIDGVGSFS 304 Query: 253 DHTPVIVSLDI 263 DH +L++ Sbjct: 305 DHFAYSCTLEV 315 >gi|13476402|ref|NP_107972.1| hypothetical protein mll7713 [Mesorhizobium loti MAFF303099] gi|14027163|dbj|BAB54117.1| mll7713 [Mesorhizobium loti MAFF303099] Length = 358 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 43/263 (16%), Positives = 72/263 (27%), Gaps = 50/263 (19%) Query: 19 HNLAAWIKENNPDIICLQET---KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75 + + I NPD+I L E T + F + Y I GVA+LS+ Sbjct: 132 KKVLSLIGRTNPDVITLDEVSQMWTTELGF---IASAYPYRILCPYPNGMFGVALLSRRP 188 Query: 76 PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135 + G + R AT TI+ + + + + + Sbjct: 189 FVA------GTAPRCEPRGAMATATIDFGGIEVDVAAIHLS-------WPWPKEQYWQIG 235 Query: 136 RFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAI 195 A L + I AGD N +P + Sbjct: 236 ELAQTLAGLGQTAIMAGDCNAVPWSAAVRRVAALGGLTLMPSAGPTWIHRTLPDVL---- 291 Query: 196 RATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHT 255 + G+ ID + T I + R SDH Sbjct: 292 --------------------RRYAGLPIDQVFSKGGLT-------ILSSQRLEDTGSDHL 324 Query: 256 PVIVSLDIPEPRKKQQDSTSQNM 278 PV+V + K+ ++ + + Sbjct: 325 PVLVEFTLRSDDKQPENGHATAL 347 >gi|172058914|ref|YP_001815374.1| endonuclease/exonuclease/phosphatase [Exiguobacterium sibiricum 255-15] gi|171991435|gb|ACB62357.1| Endonuclease/exonuclease/phosphatase [Exiguobacterium sibiricum 255-15] Length = 267 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 38/269 (14%), Positives = 81/269 (30%), Gaps = 16/269 (5%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYHI 57 + + T N +S + ++ + I + + D+I LQE + D + ++ N+ Sbjct: 1 MRLLTLNCHSWQETDQLEKLDQIVTQIIQQDYDVIALQEVSQLMDTPVLYNNIREDNFVY 60 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 + G + I G D + + I + + Sbjct: 61 LIQQALAKQGFDYSFVWDFSHI-----GYDAYEEGLALLTKHPILKSDSYYISRSQDTMD 115 Query: 118 PITSTKYDDKISWIKRFLRFASQR--LELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + I + F S + F+ +N + D ++ D Sbjct: 116 WKSRKIVRATIDLDGTPITFNSCHLGWWEDADEPFSEQFNNLIARMDPLEWTMFMGDFNN 175 Query: 176 T-LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 LE + + G D +T + + KG+R+D ++ + + Sbjct: 176 DALERETGYDYMMQRGLHDVFLLAQETVGIETVEGKIDGWEENQKGLRLDLVLSNRKID- 234 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + + SDH V V + I Sbjct: 235 -VDRVGVVFDGVFAPVVSDHFGVEVDISI 262 >gi|282862201|ref|ZP_06271264.1| Endonuclease/exonuclease/phosphatase [Streptomyces sp. ACTE] gi|282563226|gb|EFB68765.1| Endonuclease/exonuclease/phosphatase [Streptomyces sp. ACTE] Length = 253 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 15/36 (41%), Positives = 23/36 (63%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQE 37 ++V V ++NV S+R LA I+ PD++CLQE Sbjct: 19 ALVRVLSYNVRSLRDDTEALARVIRACAPDLVCLQE 54 >gi|262406033|ref|ZP_06082583.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294646465|ref|ZP_06724105.1| Ser/Thr phosphatase family protein [Bacteroides ovatus SD CC 2a] gi|294806878|ref|ZP_06765703.1| Ser/Thr phosphatase family protein [Bacteroides xylanisolvens SD CC 1b] gi|262356908|gb|EEZ05998.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|292638200|gb|EFF56578.1| Ser/Thr phosphatase family protein [Bacteroides ovatus SD CC 2a] gi|294445907|gb|EFG14549.1| Ser/Thr phosphatase family protein [Bacteroides xylanisolvens SD CC 1b] Length = 611 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 36/279 (12%), Positives = 72/279 (25%), Gaps = 60/279 (21%) Query: 3 VVTVATWNV---NSIRARIH------NLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + T+N+ N + +A I +PD++ +QE Sbjct: 25 TLRLMTYNIKNANG----MDDICSFQRVANVINNASPDVVAIQEV--------------- 65 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ-TLRIGNLY 112 +G + H + Q LR+ + Sbjct: 66 ------DSMTRRSGQKYVLGEIAECTQMHACFAPAIEFEGGKYGIGLLAKQVPLRLQTIP 119 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 LP + + +I + + + L + + Sbjct: 120 LPGREEARTLILAEFEDYIYCCTHLSLTEEDRMKSLEIVKSLIASCKKPLFLAGDMNAEP 179 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 ++ Q ++ + A ID+I S + Sbjct: 180 ESDFIKELQKDFQILSNPEKHTYPAPDPKET-------------------IDYIAASKQN 220 Query: 233 TS--LLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKK 269 + + SAR+ +P SDH P++V L E K Sbjct: 221 ATGFAVISARVVNEPM----ASDHRPILVELRTAEKADK 255 >gi|21952510|gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus] Length = 1214 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 40/254 (15%), Positives = 76/254 (29%), Gaps = 33/254 (12%) Query: 8 TWNVNSIR--ARIHNLAAWIKENNP---DIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 +WNV R N W K + I+ ET+ ++ L S C Sbjct: 6 SWNVRGFNNSVRRRNFRKWFKLSKALFGSIL---ETRVKEHRARRSLLSSFPGWKSVCNY 62 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 + I + P VT L D + + + + +G + Sbjct: 63 EFAALGRIWVVWDPAVEVTVLSKSDQTISCTVKLPHISTEFVVTFVYAVNCRYGRRRLWS 122 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + A+ + ++P I GD+N P D Sbjct: 123 ELE----------LLAANQTTSDKPWIILGDFNQSLDPVDASTGGSRITRGMEEFRECLL 172 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 + ++ F Y++W+ ++ K ID I+++ L ++ + Sbjct: 173 TSNISDLPFRGNH---------YTWWNNQENNPIAKK---IDRILVNDS---WLIASPLS 217 Query: 243 TKPRGWTKPSDHTP 256 + SDH P Sbjct: 218 YGSFCAMEFSDHCP 231 >gi|47205662|emb|CAF99515.1| unnamed protein product [Tetraodon nigroviridis] Length = 481 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 5/46 (10%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS---LNYHIET 59 R+ NL A I++++ DI+CLQE ++ ++ + + L Y E Sbjct: 190 RLPNLLAEIRQHDADILCLQEV--QEDHYENQIKPALLTLGYQCEY 233 >gi|270015330|gb|EFA11778.1| hypothetical protein TcasGA2_TC005283 [Tribolium castaneum] Length = 955 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 10/28 (35%), Positives = 13/28 (46%) Query: 9 WNVNSIRARIHNLAAWIKENNPDIICLQ 36 WN N +RA L +I DI+ Q Sbjct: 495 WNANGLRAARDELEEFINRLQLDIVLFQ 522 >gi|117928188|ref|YP_872739.1| endonuclease/exonuclease/phosphatase [Acidothermus cellulolyticus 11B] gi|117648651|gb|ABK52753.1| Endonuclease/exonuclease/phosphatase [Acidothermus cellulolyticus 11B] Length = 249 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 35/255 (13%), Positives = 70/255 (27%), Gaps = 36/255 (14%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64 V ++NV S+R + I+ PDI +QE + Sbjct: 15 RVLSYNVRSLRDDRSAVVEVIRTVRPDIAFVQE-----------------------APRF 51 Query: 65 YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124 + ++ + + G + A + + P + Sbjct: 52 FRWRTRCAQLAADAGMYVVTGGRSAGDVLLLAALRVTIRWARDVRLSHQPGLHRRGVALA 111 Query: 125 DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ 184 +++ + + LE + L + +P+ + +P+I D + Sbjct: 112 GVELAGRRAVVASIHLGLEPAQRLRHVAELLAVPEIAEGVDPVIIAGDVNEEPSGPAWRR 171 Query: 185 KLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK 244 L A YS + RID I + P + + Sbjct: 172 -LAERYRDAYGVAPAGRGETYS-------ARQPRT--RIDGIFVDPRF--QVIRCEV-PD 218 Query: 245 PRGWTKPSDHTPVIV 259 + SDH PV+ Sbjct: 219 LPAVRRASDHLPVLA 233 >gi|257075603|ref|ZP_05569964.1| hypothetical protein Faci_00999 [Ferroplasma acidarmanus fer1] Length = 24 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 8/17 (47%), Positives = 12/17 (70%) Query: 4 VTVATWNVNSIRARIHN 20 + + +WNVN IRA + N Sbjct: 1 MKILSWNVNGIRAAVKN 17 >gi|229051261|ref|ZP_04194787.1| hypothetical protein bcere0027_52020 [Bacillus cereus AH676] gi|228722111|gb|EEL73530.1| hypothetical protein bcere0027_52020 [Bacillus cereus AH676] Length = 237 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 36/263 (13%), Positives = 67/263 (25%), Gaps = 31/263 (11%) Query: 4 VTVATWNVNS--IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + WN S R +I + DI+ + E E + + G Sbjct: 1 MKIVAWN-ASMAFRKKIDKILPL----KADILAISEC---------EKSEKWGQIDKEKG 46 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 + I + + + ++ Sbjct: 47 INDFLWEGDNPNKGIGIIAFDERYQIEIHPDYNRSFRYIVPIKVSSDKQEFIMFAVWSQK 106 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL--EV 179 K + +L L+EP I GD+N I F E+ Sbjct: 107 GKKRYSRYIGQIYLVLEKYASLLKEPCIIIGDWNSSKLYDWIKRVKIHSEVVEFLEGFEI 166 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + ++ A H + + ID++ S S Sbjct: 167 KSAYHPFYEEEHGKDSEAPHYFRKE--------KARPFH----IDYLFASEIFLEQFKSF 214 Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262 +I + W + SDH P+I + Sbjct: 215 KIGSCE-EWIEFSDHMPIIAEFN 236 >gi|77411870|ref|ZP_00788203.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus agalactiae CJB111] gi|77162091|gb|EAO73069.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus agalactiae CJB111] Length = 271 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 41/283 (14%), Positives = 80/283 (28%), Gaps = 38/283 (13%) Query: 5 TVATWN------VNSIRARIHNLAAW---IKENNPDIICLQETKTEDKNFPFETLQSLNY 55 T N VN + L I DIICLQE S NY Sbjct: 3 KCLTLNTHSWMEVN----ALKKLFDLAEHIFREKYDIICLQEV--NQSISSPLAKSSPNY 56 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 H + L + +L G + ++ + + I +L Sbjct: 57 HPIEGTPALHQDNFAL----QLVHYLNLQGLHYHWTWAYNHIGYSKYHEGVAILSLKPLK 112 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + I + DD+ + R A L + + + ++ Sbjct: 113 PDDILVSAVDDETDYHTRRALVAETTLNDKVVTVVS--LHLSWFEKGFAEEWKRLETTLL 170 Query: 176 TLEVRQSFQKLQNMGF---------------TDAIRATHDTHHLYSFWDYYADSWSKNKG 220 +E N D+ + + ++ K Sbjct: 171 EVETPLLLMGDFNNPTGNQGYELVLNSPLALKDSHQIANHVFGDHTIMADIDGWEGNKKA 230 Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +++DHI S + + S+++ + SDH + ++L++ Sbjct: 231 LKVDHIFTSEDL--SISSSQVVFEGGEAPVVSDHYGLEITLNL 271 >gi|74008436|ref|XP_852503.1| PREDICTED: similar to LINE-1 reverse transcriptase homolog [Canis familiaris] Length = 1208 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 38/110 (34%), Gaps = 12/110 (10%) Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 + E R L M FTD R Y+F+ ++S RIDHI+ Sbjct: 91 KHNISKETRALNDTLDQMDFTDIYRTLQPNSTEYTFFSSAHGTFS-----RIDHILGHKS 145 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 + I SDH + + L+ +K + S ++ I Sbjct: 146 GLNRYQKIGIVPCI-----FSDHNALKLELN--HNKKFGRTSNMWRLRTI 188 >gi|77461257|ref|YP_350764.1| aminoacyl-tRNA hydrolase [Pseudomonas fluorescens Pf0-1] gi|77385260|gb|ABA76773.1| Endonuclease/exonuclease/phosphatase family protein [Pseudomonas fluorescens Pf0-1] Length = 265 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 32/252 (12%), Positives = 69/252 (27%), Gaps = 29/252 (11%) Query: 15 RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKY 74 R + L ++ + D++ LQE ++ P S + Sbjct: 40 RFILPELREAVRSVSADVVFLQEVHGTHEHHPK--------RYNNWPTMPQYEFLADSLW 91 Query: 75 QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRF 134 + + D + + L + ++ + + Sbjct: 92 PQFAYGRNAVYPEGDHGNAVLSKFQIVRHDNLDV-SISGHENRGLLHCVLRLPGDDREVH 150 Query: 135 LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDA 194 L P+I D F +++ L+ G + Sbjct: 151 AICVHLGLRESHRNAQLALLKKRLAELPEDAPVIVAGD--FNDWRQRADALLEPCGLREV 208 Query: 195 IRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLS--PEATSLLHSARIDTKPRGWTKP 251 A H A S+ + +R+D I +S + + + R W+ Sbjct: 209 FAAHHGRS---------ARSFPARLPLLRLDRIYVSNLKASQPKVLA------NRPWSHL 253 Query: 252 SDHTPVIVSLDI 263 SDH P+ V +++ Sbjct: 254 SDHAPLSVEIEL 265 >gi|32472775|ref|NP_865769.1| signal peptide [Rhodopirellula baltica SH 1] gi|32444012|emb|CAD73454.1| hypothetical protein-signal peptide prediction [Rhodopirellula baltica SH 1] Length = 284 Score = 45.5 bits (106), Expect = 0.008, Method: Composition-based stats. Identities = 33/252 (13%), Positives = 72/252 (28%), Gaps = 39/252 (15%) Query: 19 HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIE 78 LA + +PDII E + + E + L + N L I Sbjct: 64 KRLAMELALYDPDIINFSE--SPSEKLTKEVAELLGMN-HVRFPSGGNWPGTLLSKSKIS 120 Query: 79 IVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFA 138 + P + + F + L + + + + ++ I+ ++ Sbjct: 121 DSQNAPMNGERPKELFTRHWGRALVELPNDEPLIVHSAHLYPTPEPTIRLREIRAMIKSM 180 Query: 139 SQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT 198 L+ ++ GD N P + + G+ D Sbjct: 181 KSDLDSGRSMLLIGDLNHSPDTDEYKLWK--------------------DAGWIDTFAKV 220 Query: 199 HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA--------RIDTKPRGWTK 250 + + ++ + N RID++ + + + R++ + Sbjct: 221 GEGNG-FT-------IKADNPEWRIDYVFATGPIAKRVGESRPLFEGAFRVNNEDEKSYA 272 Query: 251 PSDHTPVIVSLD 262 SDH P + D Sbjct: 273 LSDHLPQLAVFD 284 >gi|326799553|ref|YP_004317372.1| endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21] gi|326550317|gb|ADZ78702.1| Endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21] Length = 649 Score = 45.5 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 46/270 (17%), Positives = 83/270 (30%), Gaps = 48/270 (17%) Query: 5 TVATWNVN--------SIRARIHNLAAWIKENNPDIICLQETKTEDKNFP---FETLQSL 53 V ++NV SI R ++ I +N PD+ +QE D +F + L Sbjct: 86 KVLSFNVRHHDDSDPQSIDERKGSIRQIIVDNAPDVFGVQE--FSDDSFETWFRAQMADL 143 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 Y Y +I + I +R + + + + Sbjct: 144 GY-------GEYYDTSITGTPKAIFYKNVRFSLQRSGTSRLGASPIINTATWVVLQDKIT 196 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + I+++ + I+ ++ Q + P+I D Sbjct: 197 SNRYFISNSHWQYDSQAIR--------------IENAKALAALVKQENTDNLPVIVFGDF 242 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF--WDYYADSWSKNKGIRIDHIMLSPE 231 + + + DA+ D+ Y+F WD S +D IM Sbjct: 243 NAKPGITEILNLKNELDVVDAL---GDSSGDYTFHGWDATGSSK-------LDWIMSDRS 292 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 S+R+ T PSDH P+I + Sbjct: 293 MA--FTSSRVITTSYNGYWPSDHWPIIATY 320 >gi|311696709|gb|ADP99582.1| extracellular nuclease [marine bacterium HP15] Length = 586 Score = 45.5 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 28/86 (32%), Gaps = 24/86 (27%) Query: 195 IRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR---IDTKP------ 245 T T Y++ Y KG +D + S + A ++ Sbjct: 508 YPCTEKTCGHYTY-RYRGQ-----KGS-LDFALASETLKPRVMGAWSWLVNADEPRVLDY 560 Query: 246 --------RGWTKPSDHTPVIVSLDI 263 RG + SDH PVIV L + Sbjct: 561 RSDHPASGRGPWRSSDHNPVIVDLKL 586 >gi|281338153|gb|EFB13737.1| hypothetical protein PANDA_004239 [Ailuropoda melanoleuca] Length = 368 Score = 45.5 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 39/265 (14%), Positives = 70/265 (26%), Gaps = 30/265 (11%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFE--TLQSLNYHIETCGQKSYNGVAILSKYQPIE 78 + I +PDI+CLQE D F L L Y + S +E Sbjct: 116 ILEEILAYHPDILCLQEV---DHYFDTFQPLLGRLGYQGTFFPKP-------WSPCLDVE 165 Query: 79 IVTHLPGD--DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 G + + I + + + + + + L+ Sbjct: 166 HNNGPDGCALFFLQNRFKLVNSANIRLTAMTLKTNQVAIAQTLECKESSRQFCIAVTHLK 225 Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV----RQSFQKLQNMGFT 192 N+ H P+I D + L Sbjct: 226 ARPGWERFRSAQGCDLLQNLQNITHGAKVPLIVCGDFNAEPTEEVYKHFASSSLNLSSAY 285 Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA-RIDTKPR----- 246 + A + Y+ W ++ +D+I S A + SA + T+ + Sbjct: 286 KLLSADGQSEPPYTTWKIRTSGECRHT---LDYIWYSQHAL-RVRSALDLLTEEQIGPNR 341 Query: 247 --GWTKPSDHTPVIVSLDIPEPRKK 269 + PSDH ++ E Sbjct: 342 LPSFNYPSDHLSLVCDFSFNEEEPD 366 >gi|262283216|ref|ZP_06060983.1| LPXTG cell wall surface protein [Streptococcus sp. 2_1_36FAA] gi|262261468|gb|EEY80167.1| LPXTG cell wall surface protein [Streptococcus sp. 2_1_36FAA] Length = 779 Score = 45.5 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 29/82 (35%), Gaps = 10/82 (12%) Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT---K 250 + HD YS++ Y + S +D+I +S A + + Sbjct: 598 NLMQEHDAADRYSYF-YRGSNQS------LDNIFISKNLAGKAIFAPVHINASFMEEHGR 650 Query: 251 PSDHTPVIVSLDIPEPRKKQQD 272 SDH PV+V LD + Sbjct: 651 ASDHDPVVVQLDFSNQTNQPDT 672 >gi|157151208|ref|YP_001450928.1| LPXTG cell wall surface protein [Streptococcus gordonii str. Challis substr. CH1] gi|157076002|gb|ABV10685.1| LPXTG cell wall surface protein, nuclease/phosphatase domain [Streptococcus gordonii str. Challis substr. CH1] Length = 779 Score = 45.5 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 29/82 (35%), Gaps = 10/82 (12%) Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT---K 250 + HD YS++ Y + S +D+I +S A + + Sbjct: 598 NLMQEHDAADRYSYF-YRGSNQS------LDNIFISKNLAGKAIFAPVHINASFMEEHGR 650 Query: 251 PSDHTPVIVSLDIPEPRKKQQD 272 SDH PV+V LD + Sbjct: 651 ASDHDPVVVQLDFSNQTNQPDT 672 >gi|154282963|ref|XP_001542277.1| predicted protein [Ajellomyces capsulatus NAm1] gi|150410457|gb|EDN05845.1| predicted protein [Ajellomyces capsulatus NAm1] Length = 956 Score = 45.5 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 28/75 (37%), Gaps = 8/75 (10%) Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 + W G ID LSP L I + K SDH P+ +L++ Sbjct: 100 TTWQDRGSP-----GTTIDLTFLSPLLHDKLRRCAIAEEA---CKGSDHKPMETTLELTP 151 Query: 266 PRKKQQDSTSQNMKP 280 K+ + ++ +P Sbjct: 152 IPKEAERRNWKDAEP 166 >gi|68477573|ref|XP_717099.1| potential Endonuclease/Exonuclease/Phosphatase [Candida albicans SC5314] gi|68477734|ref|XP_717019.1| potential Endonuclease/Exonuclease/Phosphatase [Candida albicans SC5314] gi|46438715|gb|EAK98041.1| potential Endonuclease/Exonuclease/Phosphatase [Candida albicans SC5314] gi|46438798|gb|EAK98123.1| potential Endonuclease/Exonuclease/Phosphatase [Candida albicans SC5314] Length = 363 Score = 45.5 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 36/268 (13%), Positives = 79/268 (29%), Gaps = 48/268 (17%) Query: 32 IICLQETKTEDKNFP----FETLQSLNYHIETCGQKSYNGVA--ILSKYQPIEIVTHLPG 85 IICLQE ++ +Q NY+ +G IL K Q +I+ + Sbjct: 112 IICLQEV-LHNQLIDILQGLNDIQEWNYYGVGRTDGEKSGEFAPILYKDQDFKIIENSTF 170 Query: 86 DDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELE 145 + + + + I ++ R S +L ++ Sbjct: 171 WLSPTPHVPSKGWDAALERIVTMVTFQSRLNPEIKFNIFNTHYDHRGVEARRKSSQLIVD 230 Query: 146 EPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY 205 + + + + + + + ++ ++ + + Sbjct: 231 KMKNY--------NDYPSFLCGDFNTEPNDEPYHILTKAGFKDGKILIDKKSAYGFETTF 282 Query: 206 SFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSAR------------------------ 240 + +D N+ I RID+I SP T L ++ Sbjct: 283 TGFD------INNEPISRIDYIW-SPSFTRTLSNSENDTNQDSDDDNDNDKSYEVTLKQF 335 Query: 241 -IDTKPRGWTKPSDHTPVIVSLDIPEPR 267 I + SDH PV+ + ++ + + Sbjct: 336 GILSNWFNGHHFSDHRPVVSTYELRKKK 363 >gi|268315822|ref|YP_003289541.1| Endonuclease/exonuclease/phosphatase [Rhodothermus marinus DSM 4252] gi|262333356|gb|ACY47153.1| Endonuclease/exonuclease/phosphatase [Rhodothermus marinus DSM 4252] Length = 338 Score = 45.5 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 39/257 (15%), Positives = 79/257 (30%), Gaps = 29/257 (11%) Query: 23 AWIKENNPDIICLQETKTEDKNFPF----ETLQSLNYHIETCGQKSYNGVAILSKYQPIE 78 ++ N D++ LQE E++ E L LNY + ++ + Sbjct: 90 QVLRMINADLVVLQEV--ENEEVLRRMVTEDLPDLNYEVHFVQGHDTFTGQDVAVLSRLP 147 Query: 79 IVTHLPGDDLDVQARFIEATFTINTQTLRIGNL-YLPHGNPITSTKYDDKISWIKRFLRF 137 + ++ + +R+ + D R Sbjct: 148 VEKIGRTEERVPVEGTDDTYGVSKNIWVRLYLGDLPATIIGVHFLAQPDDSRRKPRREAQ 207 Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA 197 A L E + AG + + Y+ + + + + + K G D + Sbjct: 208 AEVIRRLVERELAAGRAVAVLGDFNDYDESVLDLNGHRPITRTLALVKAAGPGPDDDLYN 267 Query: 198 TH---DTHHLYSFWDYYADSWSKNKGIR--------IDHIMLSPEATSLLHSARID--TK 244 H ++ + + ++ + IDH++LSP + L Sbjct: 268 VMAEVPQHDRFTVF------YDADEDWQVEWPELAAIDHVLLSPRLRARLREVHYVQAYD 321 Query: 245 PRGWTKPSDHTPVIVSL 261 PR T DH P++V+L Sbjct: 322 PRTVT---DHFPIVVTL 335 >gi|218671527|ref|ZP_03521197.1| putative metal-dependent hydrolase protein [Rhizobium etli GR56] Length = 170 Score = 45.5 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 19/41 (46%), Gaps = 3/41 (7%) Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +R+DHI ++ + + A + R SDH P+ + Sbjct: 130 MRLDHIFVTDDLV--VKKATVLQN-RLTRIASDHLPLFAEI 167 >gi|296274120|ref|YP_003656751.1| endonuclease/exonuclease/phosphatase [Arcobacter nitrofigilis DSM 7299] gi|296098294|gb|ADG94244.1| Endonuclease/exonuclease/phosphatase [Arcobacter nitrofigilis DSM 7299] Length = 325 Score = 45.5 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 20/47 (42%), Gaps = 5/47 (10%) Query: 223 IDHIMLSPEATSLLHSARIDTKPR-----GWTKPSDHTPVIVSLDIP 264 ID I +S + + S ++ + G SDH V+ +DI Sbjct: 279 IDFIFVSEQLKDKIVSYKVFDEHLQKNRNGTLLESDHAQVVCEIDID 325 >gi|225463874|ref|XP_002268957.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 997 Score = 45.5 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 2/40 (5%) Query: 4 VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTE 41 + + +WNV ++ + A I+ D+ CLQETK Sbjct: 3 LRILSWNVRGANDSSKRRIIKAMIRSQRVDLFCLQETKIH 42 >gi|119477271|ref|ZP_01617507.1| Endonuclease/exonuclease/phosphatase [marine gamma proteobacterium HTCC2143] gi|119449634|gb|EAW30872.1| Endonuclease/exonuclease/phosphatase [marine gamma proteobacterium HTCC2143] Length = 260 Score = 45.5 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 30/269 (11%), Positives = 68/269 (25%), Gaps = 32/269 (11%) Query: 4 VTVATWNV-------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNF-PFETLQSLNY 55 + + ++N+ NS RA + L I+ N D++ LQE +K + + Sbjct: 15 LRLCSYNIHKGICAANS-RAILPQLRHSIRTVNADMMFLQEV-VGEKQLADLSSKKVSGA 72 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 +E + + + +++ + + Sbjct: 73 AVEYPQFEFLADEVWPHYAYGRNALYQTGHHGNAILSKYPFDEWD--NTDVSHWRFSQRG 130 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 I +R ++ + A + W Sbjct: 131 ILLGKLEIGLYVICTHFGLFGRERKRQLVQLLDLVAERVPDAAPLIIAGDFNDWSGSLDR 190 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 + R Q + + + ++S + +N Sbjct: 191 QIRHRIGVQDVYREAYGRRAKTFPAKFPVFS----MDRIYYRNM---------------E 231 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 L A + + W + SDH + IP Sbjct: 232 LIDAEVLSG-MPWQQLSDHCALYAEFSIP 259 >gi|326672994|ref|XP_003199772.1| PREDICTED: transposon TX1 uncharacterized 149 kDa protein-like [Danio rerio] Length = 1451 Score = 45.5 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 31/255 (12%), Positives = 65/255 (25%), Gaps = 28/255 (10%) Query: 8 TWNVNSIRARIH--NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSY 65 + N+N R L IK N D++ +QET ++ N + + T S Sbjct: 162 SLNLNGARDIKKRMQLYELIKHKNIDVMYVQETHSDCSNTIDWEKEWEGKVVLTHTSFSR 221 Query: 66 NGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYD 125 G AIL + + + + N+Y P + Sbjct: 222 GGGAILFAKHFLPVSYQIEEVIAGRLVII---KTEFEKYRINFINVYAPTNGTERVIFLN 278 Query: 126 DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQK 185 + ++ L + + + + Sbjct: 279 SINTLLQNCRTDDYVFLGGDFNCTENERLDRNHVEPHANSSRVLRELIET---------- 328 Query: 186 LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTK 244 D R + Y++ + + R+D +++ I Sbjct: 329 ---HSLCDIWREFNGNVKQYTW----LHTRENFISMARLDRFYCFKHHVNVVRKCEIVP- 380 Query: 245 PRGWTKPSDHTPVIV 259 +DH+ V+ Sbjct: 381 ----VGFTDHSLVLC 391 >gi|160884186|ref|ZP_02065189.1| hypothetical protein BACOVA_02163 [Bacteroides ovatus ATCC 8483] gi|237721815|ref|ZP_04552296.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|298479959|ref|ZP_06998158.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. D22] gi|156110528|gb|EDO12273.1| hypothetical protein BACOVA_02163 [Bacteroides ovatus ATCC 8483] gi|229448684|gb|EEO54475.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|298273768|gb|EFI15330.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. D22] Length = 575 Score = 45.5 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 32/251 (12%), Positives = 76/251 (30%), Gaps = 20/251 (7%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + +AT N+ + + + + D++C QE N +Q+ ++ T Sbjct: 299 KTLKLATQNLWGKSTSV--VLDYFNRIDVDVLCAQEC----SNLSESDIQAQGLYVHTHS 352 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +I+S+Y I + G +D+ + + G L Sbjct: 353 NNRQGKCSIISRYPFSGITPNKYGVYIDLGDGIVVLVMNCHGAFYPYGPYQLNGIAYEGY 412 Query: 122 TKYDDKISWIKRFLRFASQRLEL--EEPLIFAGDYNIIPQPHDCYNPIIWENDA------ 173 DD +K ++ E+ + + + + + W A Sbjct: 413 EGTDDVDYVVKVNKEARQGMVDKLLEDFNSSTTPFVCLSGDFNEPSWLDWTEGALKAELA 472 Query: 174 ---CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230 R ++ I TH +++ + K+ R+D + + Sbjct: 473 PYVVQWPTTRSLWEGGIKGDAYRTIHPDPVTHPGFTWTPRPS---EKDTRDRLDLTLYTL 529 Query: 231 EATSLLHSARI 241 + + S ++ Sbjct: 530 SPNTEVKSCQV 540 >gi|327537315|gb|EGF24049.1| endonuclease/exonuclease/phosphatase family protein [Rhodopirellula baltica WH47] Length = 275 Score = 45.5 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 38/286 (13%), Positives = 72/286 (25%), Gaps = 61/286 (21%) Query: 7 ATWNVNSIRA---------RIHNLAAWIKENNPDIICLQETKTE---------------- 41 T+NV + R + I D+ LQE + Sbjct: 21 MTYNVRYLNTHDRQDLWSMRRSKVIETIAS--ADVAGLQEVTVQQLHDIQEGTPEWTWYG 78 Query: 42 ---DKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT 98 D + Y + +G LS+ + + Sbjct: 79 VGRDDGKEGGEFAPIGYR-HDRFEAMDHGTLWLSETPTVVGSKGWDAALPRTMTWMVLRR 137 Query: 99 FTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP 158 + L I + + G R + + + P+I GD+N +P Sbjct: 138 KLDRAEFLVINSHFDHRGQNA--------REQSGRLVAAEVDQRATDLPVIVMGDFNAMP 189 Query: 159 QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN 218 E + G + +A Sbjct: 190 DSAPLKALQSGEKVKLLDARDEVDGKPTGPTGTWNGFKAIQPD----------------- 232 Query: 219 KGIRIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263 RIDH++++ + R +D + SDH P+ + +D+ Sbjct: 233 --RRIDHVLVNDRVV--VQEYRTLDPRTEAGRYASDHLPIAIRIDL 274 >gi|306826582|ref|ZP_07459889.1| RgfB protein [Streptococcus pyogenes ATCC 10782] gi|304431220|gb|EFM34222.1| RgfB protein [Streptococcus pyogenes ATCC 10782] Length = 272 Score = 45.5 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 38/276 (13%), Positives = 87/276 (31%), Gaps = 20/276 (7%) Query: 3 VVTVATWNVNSIRAR--IHNLAAW---IKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57 + V T N +S + L A I DIICLQE ++ E L + Sbjct: 1 MTKVLTLNTHSWMQANTLKKLVALAEHILAEKYDIICLQEI---NQLIESELATDLPRYQ 57 Query: 58 E-----TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 + + + + I + + + + E ++ Q + + ++ Sbjct: 58 ALSGTPSIHKDHFALLLIHYLQKRGQHYYWSWAYNHIGYDIYQEGVAILSKQPIHVSDIL 117 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLI---FAGDYNIIPQPHDCYNPIIW 169 + + T + R + + F G++ + + N + Sbjct: 118 VSAMDDETDYHTRRSLIAKTRLDGKEVAVVNVHLSWFDKGFLGEWEKLEKELLTLNCPLL 177 Query: 170 ENDACFTLEVRQSFQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227 + +Q + + D+ + +S + +++DH+ Sbjct: 178 LMGDFNNPTAQDGYQVMMGSPLDLQDSHKVADHVFGDHSIVADIDGWQGNKEALKVDHVF 237 Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 S + + S++I + SDH + V+LD Sbjct: 238 TSKDCI--IRSSKITFEGGDAPVVSDHYGLEVTLDW 271 >gi|302518572|ref|ZP_07270914.1| endonuclease/exonuclease/phosphatase [Streptomyces sp. SPB78] gi|302427467|gb|EFK99282.1| endonuclease/exonuclease/phosphatase [Streptomyces sp. SPB78] Length = 253 Score = 45.5 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 32/271 (11%), Positives = 72/271 (26%), Gaps = 49/271 (18%) Query: 2 SVVTVATWNVNSIR---ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 +VV V ++N+ S+R A + + I+ +PD++ +Q Sbjct: 23 AVVRVLSYNIRSMRDDTAALGRV---IRACDPDLVLIQ-------------------EAP 60 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + + + + + L + G Sbjct: 61 RFFRWRKALARLARSAGLVTLAGGATAAGPALLCSLRATVERTEDVLLPLTPGLHRRGFS 120 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 ++ + + ++ + ++ D E Sbjct: 121 TAVVRFGAARLGVVSCHLSLA-----KDERLAQARLLTERAERLGAPHVLVGGDLNEGPE 175 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 + + A+R ++ S ++N RID + +S + Sbjct: 176 GKAFRHVAGRLRDAWAVRPW---GGEFT-------STAENPYQRIDAMFVSEGVE--VLG 223 Query: 239 ARI----DTKPRGWTKPSDHTPVIVSLDIPE 265 + D R SDH PV+ L +P Sbjct: 224 CGVPTLEDADVRA---ASDHVPVLAVLRLPA 251 >gi|282859591|ref|ZP_06268695.1| endonuclease/exonuclease/phosphatase family protein [Prevotella bivia JCVIHMP010] gi|282587642|gb|EFB92843.1| endonuclease/exonuclease/phosphatase family protein [Prevotella bivia JCVIHMP010] Length = 326 Score = 45.5 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 33/258 (12%), Positives = 61/258 (23%), Gaps = 44/258 (17%) Query: 30 PDIICLQETKTEDKNFPFET-----LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLP 84 PD++ L E E+ F+ L+ Y G+ + Sbjct: 84 PDVVGLCEV--ENDTVLFDLTKRSLLRKARYEYVMTQSADERGIDVALL-------YSPF 134 Query: 85 GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL 144 L T I ++ + T + Sbjct: 135 SFRLLKADTIRIIPMKGMKPTRDILHVMGEIPSSDTLHVFLVHAPSRSGGELQTRPYRLH 194 Query: 145 EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL 204 + +I I+ + + Q + + + TH Sbjct: 195 IAKQLACSIDSIKAIDVHAKMLIMGDFNDYSDSPSLQKLYVHNMLDVSANAQGTHGAKAT 254 Query: 205 YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKP------------------- 245 Y + W +DHI++S S + I+ P Sbjct: 255 YRY----QGEWGS-----LDHILVSGNLLSNVKDCYINDAPFLLEPDTKYGGVKPRRNYN 305 Query: 246 --RGWTKPSDHTPVIVSL 261 R SDH P+++ L Sbjct: 306 GMRYNHGFSDHLPLVLKL 323 >gi|38073480|gb|AAR10849.1| MP100 [Trypanosoma cruzi] Length = 925 Score = 45.5 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 30/290 (10%), Positives = 71/290 (24%), Gaps = 40/290 (13%) Query: 2 SVVTVATWNV-------------------NSIRARIHNLAAWIKENNPDIICLQETKTED 42 + + + TWNV S + R LA I++ + D++ +QE Sbjct: 646 TTLKLLTWNVMFDRYSGKPTPLGMPGIDWCSPK-RYPVLARVIQQEDADVVGMQEV---- 700 Query: 43 KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN 102 + +E L + E +S + + +V + + A Sbjct: 701 EPVFWEFLSKQPWMRENYYFSCGYTSPSISPWGVLMLVHRRRFPVQSITYLNVPAWTNHV 760 Query: 103 TQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD 162 + + + + + R + L + + Sbjct: 761 SLMPVVCLQLPHGPVHVAAAHLLAPYTKSHETARTSQDSALRHHMLKTLTGDVVTMGDFN 820 Query: 163 CYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR 222 + + A + T + + K Sbjct: 821 DWPTNEFLMPAESQYVDCWPLIYHTMLENDGRDEYILQTECKLKVEEMFFGRSDK----- 875 Query: 223 IDHIMLSPEATS---------LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + S ++ + + G+ PSDH V ++ + Sbjct: 876 --LFLRSRRLAPVEGHLVGTKSVNDENGNKEAPGYLFPSDHYGVSMTFAL 923 >gi|307308162|ref|ZP_07587877.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium meliloti BL225C] gi|306901365|gb|EFN31970.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium meliloti BL225C] Length = 265 Score = 45.5 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 4/53 (7%) Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDS 273 +RIDH+++ + S R+ SDH P++ LD+ R KQ+ S Sbjct: 217 LRIDHVLIGKGIE--VASCRVHGSTLAR-SASDHLPLLAELDVVM-RDKQEPS 265 Score = 40.5 bits (93), Expect = 0.26, Method: Composition-based stats. Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 5/40 (12%) Query: 4 VTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQET 38 + T+NV+S R +AA I E PD+I LQE Sbjct: 21 IRFLTYNVHSCFGTDRRLDPARIAAVIAECQPDVIALQEV 60 >gi|302884128|ref|XP_003040961.1| hypothetical protein NECHADRAFT_54591 [Nectria haematococca mpVI 77-13-4] gi|256721855|gb|EEU35248.1| hypothetical protein NECHADRAFT_54591 [Nectria haematococca mpVI 77-13-4] Length = 303 Score = 45.5 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 36/285 (12%), Positives = 86/285 (30%), Gaps = 26/285 (9%) Query: 4 VTVATWNVN-----SIRA---------RIHNLAAWIKEN---NPD-IICLQETKTEDKNF 45 + + T+N+ S RA R ++AA + PD ++C+QE T + Sbjct: 25 LRLMTYNIRYQVEPS-RAEDGEELWPLRRPHMAAQLNYELAGRPDSLVCMQEV-TYPQAL 82 Query: 46 PFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT 105 ++ + G++ LS + +L +R + + Sbjct: 83 DLMDDFGEDWALIGGGRRDGAKKGELSPIFYRRSIWNLEQTKTYWLSRTPDKAGSKGWDA 142 Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165 + + + + + + SQ + A ++ + Sbjct: 143 ELPRVVTVGRFRHLHTGARVVYMCTHFDWKGKKSQGHSAAMIIDLADRWSSHKRESLPVF 202 Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225 N + +L ++ + Y+ + ++ + +DH Sbjct: 203 VAGDLNATPDSPAYNLLATQLYDLKYQVPSSKRFGHQKTYTGFSV-----DESDDMDLDH 257 Query: 226 IMLSPEATSLLHSARIDTKPRGWTKP-SDHTPVIVSLDIPEPRKK 269 + + S + SDH PV+V ++I + +K Sbjct: 258 MFVRDPMDISFKSFAVLNTRYDDGIFISDHRPVVVDMEITQIARK 302 >gi|318057512|ref|ZP_07976235.1| hypothetical protein SSA3_06214 [Streptomyces sp. SA3_actG] Length = 250 Score = 45.5 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 32/271 (11%), Positives = 72/271 (26%), Gaps = 49/271 (18%) Query: 2 SVVTVATWNVNSIR---ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 +VV V ++N+ S+R A + + I+ +PD++ +Q Sbjct: 20 AVVRVLSYNIRSMRDDTAALGRV---IRACDPDLVLIQ-------------------EAP 57 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + + + + + L + G Sbjct: 58 RFFRWRKALARLARSAGLVTLAGGATAAGPALLCSLRATVERTEDVLLPLTPGLHRRGFS 117 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 ++ + + ++ + ++ D E Sbjct: 118 TAVVRFGAARLGVVSCHLSLA-----KDERLAQARLLTERAERLGAPHVLVGGDLNEGPE 172 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 + + A+R ++ S ++N RID + +S + Sbjct: 173 GKAFRHVAGRLRDAWAVRPW---GGEFT-------STAENPYQRIDAMFVSEGVE--VLG 220 Query: 239 ARI----DTKPRGWTKPSDHTPVIVSLDIPE 265 + D R SDH PV+ L +P Sbjct: 221 CGVPTLEDADVRA---ASDHVPVLAVLRLPA 248 >gi|296130593|ref|YP_003637843.1| Endonuclease/exonuclease/phosphatase [Cellulomonas flavigena DSM 20109] gi|296022408|gb|ADG75644.1| Endonuclease/exonuclease/phosphatase [Cellulomonas flavigena DSM 20109] Length = 232 Score = 45.5 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 9/35 (25%), Positives = 19/35 (54%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQE 37 + V T+N+ +R + L ++ PD++ +QE Sbjct: 8 TLRVMTYNLRGLREEVDALVDVVRAARPDVLAVQE 42 Score = 43.2 bits (100), Expect = 0.039, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 3/45 (6%) Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEP 266 RID +++ + AR+ SDH P++V L +PEP Sbjct: 191 RIDAVLVDERLP--VLGARV-PDEAAVGVASDHRPLVVDLHLPEP 232 >gi|83591541|ref|YP_425293.1| endonuclease/exonuclease/phosphatase [Rhodospirillum rubrum ATCC 11170] gi|83574455|gb|ABC21006.1| Endonuclease/exonuclease/phosphatase [Rhodospirillum rubrum ATCC 11170] Length = 264 Score = 45.5 bits (106), Expect = 0.009, Method: Composition-based stats. Identities = 41/273 (15%), Positives = 78/273 (28%), Gaps = 49/273 (17%) Query: 4 VTVATWNVNSI----RARIH-NLAAWIKENNPDIICLQETKT-----EDKNFPFETLQSL 53 + V WN++ R R +A + +PD++ LQE E ++ ++ Sbjct: 26 LRVVCWNLHGCVGTDRRRDPSRVAKALAVLSPDVVGLQEVDLRRHPGEAEDPLTLIARAT 85 Query: 54 NYHIETCGQKSY----NGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 G AILS++ + + R ++AT LR+ Sbjct: 86 GMRAVHSPTLKRDGGAYGNAILSRWPVVAALPLDLSVPGCEPRRAMDATLEHPAGPLRVM 145 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 +L G + + R L A R ++ +P Sbjct: 146 VTHLGLGRKERRWQVGRLGERLSRPLAGADGRDAHHPLILMGDFNEWLPWGQT------- 198 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 V + +R+D +++ Sbjct: 199 --------AVAGLKTWFDADCSRRTFPSWLPI-------------------LRLDRLLVR 231 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 P L + +G + SDH P++V L+ Sbjct: 232 PS-PRRLTPWPTLPQGQGIRRASDHLPLVVDLE 263 >gi|253999039|ref|YP_003051102.1| Endonuclease/exonuclease/phosphatase [Methylovorus sp. SIP3-4] gi|253985718|gb|ACT50575.1| Endonuclease/exonuclease/phosphatase [Methylovorus sp. SIP3-4] Length = 244 Score = 45.2 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 35/281 (12%), Positives = 77/281 (27%), Gaps = 46/281 (16%) Query: 1 MSVVTVATWNVNSIRA--------RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52 MS + + +N++ R+ RIH+L ++ + D +QE ET S Sbjct: 1 MSRMRLLCFNIHGGRSLDGQRDLQRIHHL---MQRLDIDAGVIQE---------METRPS 48 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 + + + G+ + + + + Sbjct: 49 RGGQPNDVERVAGPERPFHLICPSMLEGQGWYGNLIVSRYPIVRGLIHNLETRPSLEPRM 108 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 I + + + + +P++ D Sbjct: 109 AADALIAGPHGNLRVIGTHLSLSIYERRSEARNLIRLI------QAVEEETKSPLLLMGD 162 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 + L +AT + +R+D + Sbjct: 163 INEWQRPSALLRFLDGHLTPVPCKATFPSLCPV---------------LRLDRVWY-EAE 206 Query: 233 TSLLHSARID-TKPRGWTKPSDHTPVIVSLDIPEPRKKQQD 272 + + RID R + SDH P+++ L+ PEP +++ Sbjct: 207 GIKITAHRIDGNDIR---RLSDHLPIVIELEWPEPWPEKRT 244 >gi|260641834|ref|ZP_05413661.2| Ser/Thr protein phosphatase family protein [Bacteroides finegoldii DSM 17565] gi|260624593|gb|EEX47464.1| Ser/Thr protein phosphatase family protein [Bacteroides finegoldii DSM 17565] Length = 611 Score = 45.2 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 34/278 (12%), Positives = 77/278 (27%), Gaps = 58/278 (20%) Query: 3 VVTVATWNV---NSIRARIH------NLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + T+N+ N + +A I +PD++ +QE Sbjct: 25 TLRLMTYNIKNANG----MDDICSFQRVANVINNASPDVVAIQEV--------------- 65 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 T + +++ + + + T + LR+ + L Sbjct: 66 --DSMTRRSGQKYVLGEIAERTQMHACFAPAIEFEGGKYGIGLLTKQVP---LRLQTIPL 120 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 P + + +I + + + L + + + Sbjct: 121 PGREEARTLILAEFEDYIYCCTHMSLTEKDRMKSLEVVKSFVAPYKKPLFLAGDMNAEPE 180 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI--MLSPE 231 ++ Q ++ + A+ ID+I + S Sbjct: 181 SDFIKELQKNFQMLSNPKQSTYPASDPKET-------------------IDYITALKSNA 221 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKK 269 L S+++ +P SDH P++V L E K Sbjct: 222 NGFALISSQVLDEPM----ASDHRPILVELRTAEKADK 255 >gi|218460525|ref|ZP_03500616.1| putative endonuclease/exonuclease/phosphatase family protein [Rhizobium etli Kim 5] Length = 74 Score = 45.2 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 22/64 (34%) Query: 223 IDHIMLSPEAT--------SLLHSA-----------RIDTKPR-GWTKP--SDHTPVIVS 260 +D+I LSP ++ + ++ PR GW +P SDH PV+++ Sbjct: 11 LDYIWLSPALAAHNSGRLPDIIRNGQPYRTVFPPGQEVERYPRTGWDRPKASDHCPVVMT 70 Query: 261 LDIP 264 LD+P Sbjct: 71 LDLP 74 >gi|94957778|gb|ABF47139.1| inositol phosphorylsphingolipid-phospholipase C [Cryptococcus neoformans var. neoformans] Length = 529 Score = 45.2 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 39/241 (16%), Positives = 70/241 (29%), Gaps = 20/241 (8%) Query: 15 RARIHNLAAWIKENNPDIICLQETKT-EDKNFPFETLQ-SLNYHIETCGQKSYNGVAILS 72 R RIH +A ++ ++ DI+CLQE +D E +Q +L + +G+AI + Sbjct: 32 RTRIHAIADYLASSSYDIVCLQELWIYKDYEVVREAVQRNLPFSRFFHTGALGSGLAIFT 91 Query: 73 KYQPIEIV-----------THLPGDDLDVQARFIEATFTINTQTLRIGNLYLP-HGNPIT 120 ++ I GD +A + I N ++ G Sbjct: 92 RFPLIAAHALPYSLSGSPAQAFAGDFFVKKAAANVVILHPVLGEVEIWNTHMHAAGEHPP 151 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW------ENDAC 174 T+ +I+ + GD+N P Sbjct: 152 DTRQAHRIAQSWELANAVRGGAAKGRYVFVMGDFNSQPWSIPIAMMRDHAQLMDSFGQVH 211 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 + S + YS + + G R+D+I A + Sbjct: 212 PSTNSEISPPPSPAEALRVYGMTCDSPLNTYSAGKPIPEHVLEKGGKRLDYIFFRQPAIA 271 Query: 235 L 235 Sbjct: 272 R 272 >gi|320158664|ref|YP_004191042.1| metal-dependent hydrolase [Vibrio vulnificus MO6-24/O] gi|319933976|gb|ADV88839.1| metal-dependent hydrolase [Vibrio vulnificus MO6-24/O] Length = 297 Score = 45.2 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 42/296 (14%), Positives = 86/296 (29%), Gaps = 61/296 (20%) Query: 4 VTVATWNVNSIR----ARIH----------NLAAWIKENNPDIICLQET-------KT-- 40 +T +WN+ + AR+ LA + ++ N D++ QE K Sbjct: 28 MTFTSWNMEWLSSTPSARVKESHRNEEDFAKLAMYFQKTNSDVLAFQEVNDLAAIKKVVG 87 Query: 41 EDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIE----IVTHLPGDDLDVQARFIE 96 + F + Y + + K P I + L + I Sbjct: 88 TNYQILFSDRSNPRYQRFQFDDINQYTGFAIKKGIPFRDVGDIQLNKGNSKLRFASYVII 147 Query: 97 ATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI 156 + L + G + + ++ SQR ++ + GD+N Sbjct: 148 GNTSNEIHVLNVHLKAGCSGAYKGNDACRTLRLESQALGQWISQRQNNKQNYLVLGDFNH 207 Query: 157 IPQPHDCYNPIIWE--NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADS 214 + + E ++ K+++ + + + + Sbjct: 208 NLAYRNDWLMNELTSAGKIHLLTEDTKANCKVRSKKQPNKVH------------SFRSL- 254 Query: 215 WSKNKGIRIDHIMLSPEA------TSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 IDHI++S L S + + SDH PV ++ +P Sbjct: 255 --------IDHIIVSEGLSASQAEQKLFTSNDVLKY-----QLSDHCPVSTTVTLP 297 >gi|298204335|gb|ADI61816.1| endonuclease-reverse transcriptase [Bombyx mori] Length = 994 Score = 45.2 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 39/278 (14%), Positives = 75/278 (26%), Gaps = 20/278 (7%) Query: 6 VATWNVNSIRARIHNLAAWIKE----NNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 +ATWNV + + + +N ++ L ET N F T +I Sbjct: 37 IATWNVRGL--LQPGKLSIVDAESNNHNISVLGLSETHMR-GNGHFTTPSGGTLYISGSE 93 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 KS NGV IL ++ V + + A I I Sbjct: 94 NKSANGVGILLPRDIVKHVLGYNPISDRIITIRLNAKPNILNIVQVYAPTEKAKEEDIDC 153 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 ++ L S R + + R Sbjct: 154 F-----YESLEATLNTISNREITIILGDWNAKIGNTCNDDLPSIVGNFGLGVRNERGQRL 208 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 ++ H LY++ + +N+ ID+I+++ S + + + Sbjct: 209 LDYCIERKFCIANTCFQHHPRRLYTWTS--PGARYRNQ---IDYILINSRWKSAIRNVKT 263 Query: 242 DTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMK 279 G +DH ++ + + + Sbjct: 264 FP---GAECGTDHNLLVARFTLRLKAASSRTTRGPRAL 298 >gi|254580597|ref|XP_002496284.1| ZYRO0C14872p [Zygosaccharomyces rouxii] gi|238939175|emb|CAR27351.1| ZYRO0C14872p [Zygosaccharomyces rouxii] Length = 496 Score = 45.2 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 31/191 (16%), Positives = 50/191 (26%), Gaps = 2/191 (1%) Query: 17 RIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75 R L K N D+ICLQE + ++F + L L Y + Q S N + + Sbjct: 126 RSKVLLNEFKYYNADVICLQEIDYIQYQSFWKDELAKLGYDSQFHRQASKNHGVAIVWKR 185 Query: 76 PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135 ++T D D ++ T I + Sbjct: 186 EYFVMTDKMLIDFDRESSGDIPPRTTTNNAGLI-LSLKFSDKVAQEHNLKKTGIIVGTTH 244 Query: 136 RFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAI 195 F E N + + N + ND + + F Sbjct: 245 LFWHPFGTFERTRQCYVVLNKVKEFSHRVNVLQNGNDGDHSHWYPFFCGDFNSQPFDSPY 304 Query: 196 RATHDTHHLYS 206 + YS Sbjct: 305 LSMTRKPIEYS 315 >gi|159490372|ref|XP_001703153.1| MaoC-like dehydratase [Chlamydomonas reinhardtii] gi|158270783|gb|EDO96618.1| MaoC-like dehydratase [Chlamydomonas reinhardtii] Length = 1117 Score = 45.2 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 12/69 (17%) Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPS 252 D+ R H T ++F ++ S RID IMLSPE S L + +PS Sbjct: 114 DSFRHLHPTRRSFTFINHMGAS-------RIDRIMLSPELLSSLRACAHVPG-----RPS 161 Query: 253 DHTPVIVSL 261 DH V+ +L Sbjct: 162 DHRLVVATL 170 >gi|111225231|ref|YP_716025.1| hypothetical protein FRAAL5881 [Frankia alni ACN14a] gi|111152763|emb|CAJ64506.1| hypothetical protein; putative membrane protein [Frankia alni ACN14a] Length = 356 Score = 45.2 bits (105), Expect = 0.009, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 7/41 (17%) Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +RIDH++ SP + ++ G SDH PVI L Sbjct: 320 LRIDHVLTSPAFA--VTGFQV-----GHDFGSDHLPVIADL 353 >gi|298483187|ref|ZP_07001367.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. D22] gi|298270704|gb|EFI12285.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. D22] Length = 305 Score = 45.2 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 42/270 (15%), Positives = 82/270 (30%), Gaps = 28/270 (10%) Query: 4 VTVATWNV---N-------SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + V ++N+ N S AR I E+ P +I +QE + + E + Sbjct: 50 IKVMSFNIRYYNTKDTGEKSWEARTAAFIPMIGEHKPTVIGMQEARPPQLKWLEENWKDY 109 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL-RIGNLY 112 Y + + N + + + V + D + T+ RI Sbjct: 110 GYVGKGRRANNANNDEFVPIFYRKKAVELIKWDCFWLSETPDVPGSQGWDSTVPRIATWA 169 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 + + I+ + +E + + N P + D Sbjct: 170 IFKHIASGKKFF--FINTHIDVGSTIAPGKSMEVIVNKMSELNPEGLPMLLTADFNKQID 227 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 + V+ + D+ + Y+ + A+ + +DHI + Sbjct: 228 SDIFNGVKTFMTNV------RLSAPITDSKYSYTGFGT-ANPYI------VDHIFCTG-- 272 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 L ID + T SDH P+I L+ Sbjct: 273 FKALKFETIDKVYQNITYISDHYPIIGKLE 302 >gi|158425166|ref|YP_001526458.1| endonuclease [Azorhizobium caulinodans ORS 571] gi|158332055|dbj|BAF89540.1| endonuclease [Azorhizobium caulinodans ORS 571] Length = 370 Score = 45.2 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 22/58 (37%), Gaps = 17/58 (29%) Query: 223 IDHIMLSPEATSLLHSARIDTK-----------------PRGWTKPSDHTPVIVSLDI 263 ID+I+LSPE + + + K R SDH+ V V L + Sbjct: 313 IDYILLSPELFGKVTAGGVFRKGAWPGSRPKRWDVYPEVARPADAASDHSAVWVDLAL 370 >gi|315221940|ref|ZP_07863851.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus anginosus F0211] gi|315188906|gb|EFU22610.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus anginosus F0211] Length = 736 Score = 45.2 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 29/77 (37%), Gaps = 10/77 (12%) Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT---K 250 + HD YS++ Y + S +D+I +S + + + Sbjct: 604 NMMLNHDAADRYSYF-YRGSNQS------LDNIFVSKNIADKTVFSPVHINASFMEEHGR 656 Query: 251 PSDHTPVIVSLDIPEPR 267 SDH PVI LD + + Sbjct: 657 ASDHDPVIAQLDFSQKK 673 >gi|151554255|gb|AAI49516.1| CCRN4L protein [Bos taurus] Length = 361 Score = 45.2 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 36/256 (14%), Positives = 64/256 (25%), Gaps = 28/256 (10%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFE--TLQSLNYHIETCGQKSYNGVAILSKYQPIE 78 + I PDI+CLQE D F L L Y + S +E Sbjct: 113 ILEEILAYQPDILCLQEV---DHYFDTFQPLLSRLGYQGTFFPKP-------WSPCLDVE 162 Query: 79 IVTHLPGD--DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 G + + I + + + + + + L+ Sbjct: 163 HNNGPDGCALFFLQNRFKLVNSANIRLTAMTLKTNQVAIAQTLECKESSRQFCIAVTHLK 222 Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN----MGFT 192 + N+ P+I D + Sbjct: 223 ARTGWERFRSAQGCDLLQNLQTITQGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAY 282 Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS------PEATSLLHSARIDTKPR 246 + A + Y+ W ++ +D+I S A LL +I Sbjct: 283 KLLSADGQSEPPYTTWKIRTSGECRHT---LDYIWYSRQALSVRSALDLLTEEQIGPNRL 339 Query: 247 -GWTKPSDHTPVIVSL 261 + PSDH ++ Sbjct: 340 PSFNYPSDHLSLVCDF 355 >gi|225856435|ref|YP_002737946.1| metal-dependent hydrolase [Streptococcus pneumoniae P1031] gi|225725346|gb|ACO21198.1| metal-dependent hydrolase [Streptococcus pneumoniae P1031] Length = 271 Score = 45.2 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 31/272 (11%), Positives = 71/272 (26%), Gaps = 14/272 (5%) Query: 4 VTVATWNVNSI--RARIHNL---AAWIKENNPDIICLQETK-------TEDKNFPFETLQ 51 + T N S + I E + D+IC QE E + Sbjct: 1 MKFLTLNTYSWMEKEAEEKFQILLEDILEKDYDLICFQEINQEMTSSEVEVNDLYQALPA 60 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 + H + + + K + G D + I + I + + + ++ Sbjct: 61 AEPIHQDHYVRLLVEKLLEQGKNYYWTWAYNHIGYDRYHEGVAILSKTPIEAREILVSDV 120 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 P + + K + ++ ++ + Sbjct: 121 DDPTDYHTRRVALAETVVDGKELAVASVHLSWWDKGFQEEWARFEAVLKKLNKPLLLAGD 180 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 + +G DA + Y+ + +RID++ + E Sbjct: 181 FNNPAGQEGYQAILASPLGLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTTKE 240 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + + + + SDH + L+ Sbjct: 241 LA--VENLHVVFDGNKSPQVSDHYGLNAILNW 270 >gi|158312926|ref|YP_001505434.1| endonuclease/exonuclease/phosphatase [Frankia sp. EAN1pec] gi|158108331|gb|ABW10528.1| Endonuclease/exonuclease/phosphatase [Frankia sp. EAN1pec] Length = 314 Score = 45.2 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 7/43 (16%) Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +RIDH++ SP + ++ G SDH PV L + Sbjct: 278 LRIDHVLASPAFA--VTGYQV-----GSEFDSDHKPVTADLAL 313 >gi|156836046|ref|XP_001642263.1| hypothetical protein Kpol_237p1 [Vanderwaltozyma polyspora DSM 70294] gi|156112746|gb|EDO14405.1| hypothetical protein Kpol_237p1 [Vanderwaltozyma polyspora DSM 70294] Length = 503 Score = 45.2 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 52/184 (28%), Gaps = 2/184 (1%) Query: 25 IKENNPDIICLQET-KTEDKNFPFETLQSLNYHIETCGQKSYN-GVAILSKYQPIEIVTH 82 + N D+ICLQE + + F + L Y + S N GVAI+ K + ++ Sbjct: 140 FQHYNSDVICLQEIDHIQYQAFWKVEFEKLGYESQFHRIASKNHGVAIVWKREMFKMTDR 199 Query: 83 LPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRL 142 + D + I N L + + I F Sbjct: 200 MLIDFDKETSSDIPPRTRTNNTGLILSLKFSDKILSTLPKNTKTTGIIIGTTHLFWHPFG 259 Query: 143 ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH 202 E N + + N + ND + V + F + Sbjct: 260 TYERTRQCYVLLNKMKEFMHRVNVLQNGNDGDLSHWVPFFCGDFNSQPFDSPYLSMTSKP 319 Query: 203 HLYS 206 Y+ Sbjct: 320 IEYT 323 >gi|284030291|ref|YP_003380222.1| endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836] gi|283809584|gb|ADB31423.1| Endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836] Length = 254 Score = 45.2 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 41/280 (14%), Positives = 72/280 (25%), Gaps = 43/280 (15%) Query: 1 MS--VVTVATWN---------VNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFET 49 MS V V TWN V+ R + A ++ PD++ +QE + Sbjct: 1 MSATTVRVMTWNLWWRFGPQWVD----RQEAILATLRAVGPDVVAVQE--AWPEQVETLA 54 Query: 50 LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTH---LPGDDLDVQARFIEATFTINTQTL 106 + L H G I P+ + + + Sbjct: 55 -EQLGMHCRYAGPSYPPETDIARGDDPVSLGMGLLSRWPIADWKVRTMPARHRQLEPVAV 113 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 + + ++ + + ++ + EL + GD +I P Sbjct: 114 VASLDHPQVTLHVVTSCLEYEPAFTDDRIAQTRLLAELATDPAYDGDAPVIVAGDLNAGP 173 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226 + + + D RIDHI Sbjct: 174 TSRVLGPLYDVLRDAWTGDPDAITSPDEAGPDLRDQ-------------------RIDHI 214 Query: 227 MLSPEATSL---LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 P S + A++ P PSDH V+ L Sbjct: 215 FYRPGTFSQEVEVTQAQLAGDPVDGITPSDHQAVVCDLRW 254 >gi|149708543|ref|XP_001488584.1| PREDICTED: angel homolog 2 (Drosophila) [Equus caballus] Length = 544 Score = 45.2 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 5/63 (7%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73 R N+ IK + D++CLQE ++ ++ E L+SL YH E + Sbjct: 200 RFPNILKEIKHFDADVLCLQEV--QEDHYGTEIRPSLESLGYHCEYKMRTGRKPDGCAIC 257 Query: 74 YQP 76 ++ Sbjct: 258 FKH 260 >gi|104779394|ref|YP_605892.1| DNAse I-like hydrolase [Pseudomonas entomophila L48] gi|95108381|emb|CAK13075.1| putative DNAse I-like hydrolase [Pseudomonas entomophila L48] Length = 284 Score = 45.2 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 14/60 (23%) Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 +F + +DHI+LSP T L + +P SDH PV V + +PE Sbjct: 228 TFPSWRPQ-------RCLDHILLSPSLT--LERVEVLAQP-----ISDHLPVAVEIRLPE 273 >gi|55820291|ref|YP_138733.1| hypothetical protein stu0193 [Streptococcus thermophilus LMG 18311] gi|55736276|gb|AAV59918.1| conserved hypothetical protein [Streptococcus thermophilus LMG 18311] Length = 290 Score = 45.2 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 28/272 (10%), Positives = 69/272 (25%), Gaps = 26/272 (9%) Query: 2 SVVTVATWNVNSIRARIH----NLAAWIKEN----NPDIICLQETKTEDKNFPFETLQ-S 52 ++ T N +S + +KE DIIC QE ++ ++ Sbjct: 19 KIMKFLTLNTHS---WMEEDAEGKFQTLKEQILKAQYDIICFQEV---NQEIETAAVETD 72 Query: 53 LNYHIETCGQKSYNGVAIL---------SKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 YH+ + + + G D + + + + Sbjct: 73 AYYHVLPSATSIHQDHFVRLLVEKLAEEGLQYHWTWAYNHIGYDHLNEGVAVLSRQPLTA 132 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 + + ++ P + + + ++ Sbjct: 133 SEILVSDVDDPTDYHTRRVAVAETTVDGREVAVASIHLSWWDKGFQEEWARIEERFQSIG 192 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223 I+ + + D+ + T+ Y+ + +RI Sbjct: 193 KPIILAGDFNNPAGREGYQTILASPLKLQDSFQVAQKTNGSYTVGPGIDGWKGNEEPLRI 252 Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHT 255 D++ S E ++ + + SDH Sbjct: 253 DYVFASQEWA--VNRLSVIFDGNNQSLVSDHY 282 >gi|27367041|ref|NP_762568.1| putative phospholipase C [Vibrio vulnificus CMCP6] gi|27358609|gb|AAO07558.1| Putative phospholipase C [Vibrio vulnificus CMCP6] Length = 442 Score = 45.2 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 32/283 (11%), Positives = 72/283 (25%), Gaps = 43/283 (15%) Query: 4 VTVATWNVNSIRA-------RIHNLAAWIKENNPDIICLQETKTE-DKNFPFETLQSLNY 55 + + T+N+ ++ A R + ++K D++ LQE F E + Y Sbjct: 178 LKIMTYNIWALPAIASHIGERFELIPDYVK--GYDVLALQEVFANGRDAFLRELAKEYPY 235 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + + +N + + I Sbjct: 236 QTKMLDKDGFNIYDGGVIIVSRYPIVNQAQFVFPDCTGTDCFADKGVNYAEVIK------ 289 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + + ++ + ++ A I Y+ N Sbjct: 290 -GGEAYHVFATHTASYDTDTARDYRQRQFKQMRALAQSLKIPANETVVYSGDFNVNK--- 345 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYS--FWDYYADSWS-------KNKGIRIDHI 226 + A + Y+ +D ++++ +N +D++ Sbjct: 346 ------RKFPSDYQQMIANLSAIEPHYSGYTESTFDPRINNFAGEPLSGGENVEY-LDYV 398 Query: 227 MLSPEAT---SLLHSARIDT----KPRGWTKPSDHTPVIVSLD 262 M+S E + I SDH PV + Sbjct: 399 MVSNEYAVKGDNNNHVDIPRSTAESLWKHYNLSDHFPVSTVIK 441 >gi|262274141|ref|ZP_06051953.1| hypothetical protein VHA_001117 [Grimontia hollisae CIP 101886] gi|262221951|gb|EEY73264.1| hypothetical protein VHA_001117 [Grimontia hollisae CIP 101886] Length = 252 Score = 45.2 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 26/247 (10%), Positives = 57/247 (23%), Gaps = 18/247 (7%) Query: 29 NPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIE-IVTHLPGDD 87 + D++ QE + + + L Y + + + S + + D Sbjct: 10 DADLVAFQEV--DSEASLSKVLNPTAYDFYFSDRTKHFNHSRRSHQFTGWAVKKGIKVVD 67 Query: 88 LDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEP 147 + TF + + N + + Sbjct: 68 HEDYQPLGLPTFLSRGNLRYGAYIEVKRENQPPLHLLSIHLKSGCFETPIRRNNSCKKLD 127 Query: 148 LIF-------AGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHD 200 + + + ND + + ++ Sbjct: 128 HQIEALSVWINARLKLGQDFIIAGDFNHYLNDKNEWVWKQLLLDVGEDNLVKLTKGTPAK 187 Query: 201 THHLYSFWDYYADSWSKNKGIR-IDHIMLSPEAT-----SLLHSARIDTKPRGWTKPSDH 254 ++Y W + IDHI+ S A + + SDH Sbjct: 188 CKARK--YNYRTKRWEHVVYQKLIDHIIASKGAVSALNPPQARQYQYSYHAVATYRLSDH 245 Query: 255 TPVIVSL 261 P++V L Sbjct: 246 CPIVVDL 252 >gi|83718560|ref|YP_442749.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia thailandensis E264] gi|257138960|ref|ZP_05587222.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia thailandensis E264] gi|83652385|gb|ABC36448.1| endonuclease/exonuclease/phosphatase family superfamily [Burkholderia thailandensis E264] Length = 286 Score = 45.2 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 17/38 (44%), Gaps = 4/38 (10%) Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 D ++ + ID G T+ SDH P+++ L Sbjct: 250 DFAFVTDTLAHRISRCEID----GATRASDHQPIVLEL 283 Score = 39.0 bits (89), Expect = 0.86, Method: Composition-based stats. Identities = 10/48 (20%), Positives = 18/48 (37%), Gaps = 20/48 (41%) Query: 4 VTVATWNV------NS-------IRARIHNLAAWIKENNPDIICLQET 38 + + +WN+ N I A L + D++C+QE Sbjct: 1 MRLISWNIQWGRDANGTVDLARTIDAA-RGLGDF------DVLCMQEV 41 >gi|297160401|gb|ADI10113.1| hypothetical protein SBI_06993 [Streptomyces bingchenggensis BCW-1] Length = 255 Score = 45.2 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 36/242 (14%), Positives = 62/242 (25%), Gaps = 13/242 (5%) Query: 31 DIICLQETKTE-DKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLD 89 D++ LQE + D+N Q L H S I+ + Sbjct: 11 DVLGLQEVWADGDENLAGWLAQRLGMHWTWAASDSPQKWQHRIGDPTIDFGNAVLSRWPI 70 Query: 90 VQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLI 149 + R+ L + + ++ ++ I Sbjct: 71 AERDVARLPAAGGPDDGRLALYALVDAPSHPAPFFTTHLNADLHESAVRCAQVTALARFI 130 Query: 150 FAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWD 209 P + W + L + D ++ WD Sbjct: 131 AERRGAGPFPPVVTGDYNAWPDSDEMRLLGGCRTAPAVPGQVLLDVWEYADPAAPWATWD 190 Query: 210 ----YYADSWSKNKGIRIDHIMLSPEATSLLHSAR-IDTKPRG-----WTKPSDHTPVIV 259 Y A ++ + RID+I + P L R + G PSDH V+ Sbjct: 191 AANPYVARTFEPSV--RIDYIHVGPPGPDGLGHVRSVRRAGDGPVDEVGVWPSDHAAVVA 248 Query: 260 SL 261 L Sbjct: 249 EL 250 >gi|237749180|ref|ZP_04579660.1| endonuclease/exonuclease/phosphatase [Oxalobacter formigenes OXCC13] gi|229380542|gb|EEO30633.1| endonuclease/exonuclease/phosphatase [Oxalobacter formigenes OXCC13] Length = 264 Score = 45.2 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 45/281 (16%), Positives = 82/281 (29%), Gaps = 41/281 (14%) Query: 4 VTVATWNVN---SI--RARIHNLAAWIKENNPDIICLQETKT-EDKNFPFETL--QSLNY 55 + +AT+N++ SI R I L I+ D+I LQE + D + L Q Sbjct: 3 LRIATYNIHKGASIDHRPIIQELKRSIRSLGADVIFLQEVQGRHDLQVNRQALLWQEQGQ 62 Query: 56 HIE-------------TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN 102 H + ++G A+LS Y + D + Sbjct: 63 HAYLAGDSLYCAYGKNSVYNYGHHGNALLSTYPIVSQFNQDVSDHALESRGILHCVLQTP 122 Query: 103 TQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD 162 + ++L N + I ++ + + + + + Sbjct: 123 ETKVYCYVIHLGLFNGSRIRQTRALIRTVQASAPKDAPVIIAGDFNDWNNKLSGFLMRTL 182 Query: 163 CYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR 222 + E D + + + A R + R Sbjct: 183 QVKEVFDELDMKQNGKRSYFPRLTGQVPKPVAARTFPALFPFF----------------R 226 Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +D I + + SA + WT SDH P++ SL I Sbjct: 227 LDRIYV-RGFE--VDSASVMQGS-PWTSLSDHAPLVASLRI 263 >gi|156974066|ref|YP_001444973.1| hypothetical protein VIBHAR_01777 [Vibrio harveyi ATCC BAA-1116] gi|156525660|gb|ABU70746.1| hypothetical protein VIBHAR_01777 [Vibrio harveyi ATCC BAA-1116] Length = 446 Score = 45.2 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 38/283 (13%), Positives = 82/283 (28%), Gaps = 43/283 (15%) Query: 4 VTVATWNVNSIRA-------RIHNLAAWIKENNPDIICLQETKTE-DKNFPFETLQSLNY 55 + + T+N+ ++ A R + ++K D++ LQE + + F E + Y Sbjct: 182 LKLVTYNIWALPAVASHIGDRYELIPEYVK--GYDVVALQEVFADGREAFLRELAKEYPY 239 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + + +N + + + I + Sbjct: 240 QTKMLDKDGFNIHDGGVTIVSRYPIVNQAQYVFPDCSSTDCFADKG------INYAEIIK 293 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 G + + + ++ + ++ A NI Y+ N Sbjct: 294 GGQA-YHVFATHAASSDTDIAREHRQRQFKQMRAMAKSLNIPANETVVYSGDFNVNK--- 349 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYS--FWDYYADSWS-------KNKGIRIDHI 226 + A + Y+ +D ++++ N +D++ Sbjct: 350 ------LKFPGDYQQMIANLSAVEPEYSGYTASTFDPRINNFAGKALSGGDNVEY-LDYV 402 Query: 227 MLSPEA-TSLLHSARID----TKPRGWTK--PSDHTPVIVSLD 262 M+S E + R+D T W SDH PV L Sbjct: 403 MVSSEYGAKSFNDNRVDVPRSTAASLWKHYNLSDHFPVSTVLK 445 >gi|221068733|ref|ZP_03544838.1| Endonuclease/exonuclease/phosphatase [Comamonas testosteroni KF-1] gi|220713756|gb|EED69124.1| Endonuclease/exonuclease/phosphatase [Comamonas testosteroni KF-1] Length = 291 Score = 45.2 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 41/303 (13%), Positives = 89/303 (29%), Gaps = 58/303 (19%) Query: 4 VTVATWNV------NSIRARIHNLAAWIK-ENNP---DIICLQETKT-------EDKNFP 46 + + +WNV + + + ++ D++CLQE + + P Sbjct: 1 MNILSWNVQWCCGMDGQVSVERIVRHALQMGEQAGGLDVLCLQEIAVNYPDLQGQPGDQP 60 Query: 47 FETLQSL-NYHIET--------CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA 97 E L + I G + ++ +++ H D R ++ Sbjct: 61 AELKALLPGWQIVFGASVDEFTSRGHQRFGNLVATRLPLLQLQHHPLPMPADADVRCMQR 120 Query: 98 TFTINTQ------TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFAS------------ 139 ++ T +RI +L + + + ++ + Sbjct: 121 MCSVVTVADAALGPVRIMTTHLEYFSKRQRMAQAGALRDLQMQACALADAPPQPASDGSP 180 Query: 140 -QRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT 198 Q + GD+N P + LQ + ++ Sbjct: 181 YQTKPHTRHAVLCGDFNFEPHEPEYA--------VLSAPWAAGEQGCLQAGQWRNSWDLL 232 Query: 199 HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVI 258 H + +W G D + +S + + R+D T+ SDH PV+ Sbjct: 233 HPGQPQPPTFRLVDRTWGAEPGA-CDLLWVSDSLCQHVQAWRVD----STTEASDHQPVM 287 Query: 259 VSL 261 ++L Sbjct: 288 LTL 290 >gi|319745959|gb|EFV98242.1| RgfB protein [Streptococcus agalactiae ATCC 13813] Length = 276 Score = 45.2 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 42/285 (14%), Positives = 81/285 (28%), Gaps = 38/285 (13%) Query: 2 SVVTVATWN------VNSIRARIHNLAAW---IKENNPDIICLQETKTEDKNFPFETLQS 52 S+ T N VN + L I DIICLQE S Sbjct: 5 SMAKCLTLNTHSWMEVN----ALKKLFDLAEHIFREKYDIICLQEV--NQSISSPLAKSS 58 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 NYH + L + +L G + ++ + + I +L Sbjct: 59 PNYHPIEGTPALHQDNFAL----QLVHYLNLQGLHYHWTWAYNHIGYSKYHEGVAILSLK 114 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 + I + DD+ + R A L + + + ++ Sbjct: 115 PLKPDDILVSAVDDETDYHTRRALVAETTLNDKVVTVVS--LHLSWFEKGFAEEWKRLET 172 Query: 173 ACFTLEVRQSFQKLQNMGF---------------TDAIRATHDTHHLYSFWDYYADSWSK 217 +E N D+ + + ++ Sbjct: 173 TLLEVETPLLLMGDFNNPTGNQGYELVLNSPLALKDSHQIANHVFGDHTIMADIDGWEGN 232 Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 K +++DHI S + + S+++ + SDH + +++D Sbjct: 233 KKALKVDHIFTSEDL--SISSSQVVFEGGEAPVVSDHYGLEITID 275 >gi|241954618|ref|XP_002420030.1| endonuclease/exonuclease/phosphatase family protein, putative [Candida dubliniensis CD36] gi|223643371|emb|CAX42248.1| endonuclease/exonuclease/phosphatase family protein, putative [Candida dubliniensis CD36] Length = 362 Score = 45.2 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 33/256 (12%), Positives = 67/256 (26%), Gaps = 30/256 (11%) Query: 32 IICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQ 91 IICLQE ++ + L+ LN E S ++ Sbjct: 117 IICLQEV-LHNQLL--DILEGLNEIEEWNYYGVGRTDGKTSGEYAPIFYKDKDFKIIENS 173 Query: 92 ARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFA 151 ++ T I ++ + S I + + Sbjct: 174 TFWLSPTPNIPSKGWDAALERIVTMVTFESRLNPQIKFNIFNTHYDHRGIIARRKSSQLI 233 Query: 152 GDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYY 211 D + + + + + ++ + + ++ +D Sbjct: 234 VDKMKNYNDYPSFLCGDFNTEPNDEPYHILTTAGFKDGKILIDKNSAYGFETTFTGFD-- 291 Query: 212 ADSWSKNKGI-RIDHIMLSPEATSL-------------------LHSARIDTKPRGWTKP 251 N+ I RID+I SP T L I + Sbjct: 292 ----INNEPISRIDYIW-SPAFTHTSLSSENETGNDSDDTYEVTLKQFGILSNWFNGHHF 346 Query: 252 SDHTPVIVSLDIPEPR 267 SDH PV+ + ++ + + Sbjct: 347 SDHRPVVSTYELRKKK 362 >gi|90577899|ref|ZP_01233710.1| Exodeoxyribonuclease III [Vibrio angustum S14] gi|90440985|gb|EAS66165.1| Exodeoxyribonuclease III [Vibrio angustum S14] Length = 268 Score = 45.2 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 39/276 (14%), Positives = 78/276 (28%), Gaps = 25/276 (9%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQETK----------TEDKNFPFE 48 + + T N +S + ++ +A I E + D+I LQE + NFP Sbjct: 1 MKLLTLNTHSWQEQDQLEKLDVVAKAIIEQDCDVIALQEVNQRYDSSIINASTVSNFP-- 58 Query: 49 TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108 + S NY + G + + + + L +R + Sbjct: 59 -VHSDNYAYLLQQRLLVLGHQYYLTWDFVHQSYDVYQEGLAFLSREPVIEHQVIDLNDNY 117 Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168 + H + T + Sbjct: 118 DEKHWKHRRAVRITLGYKDQTLDIYNCHCGWWNDIESPFQQHIERIKSCLSGRLSLFLGD 177 Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK-GIRIDHIM 227 + + E + + + + D + + D W N +RID++ Sbjct: 178 FNTPSHLVDEGYSYLIQQGFIDTYTSAQMKDDGNTVVKCID----GWQNNHEALRIDYVF 233 Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + + S ++ + SDH +IVSLD+ Sbjct: 234 SNQNV--SVSSHKVIFNGDYYPIVSDHFGLIVSLDL 267 >gi|332076038|gb|EGI86504.1| endonuclease/Exonuclease/phosphatase family protein [Streptococcus pneumoniae GA41301] Length = 260 Score = 45.2 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 28/242 (11%), Positives = 66/242 (27%), Gaps = 9/242 (3%) Query: 21 LAAWIKENNPDIICLQETK-------TEDKNFPFETLQSLNYHIETCGQKSYNGVAILSK 73 L I E + D+IC QE E + + H + + ++ K Sbjct: 12 LLEDILEKDYDLICFQEINQEMTSSEVEVNDLYQALPAAEPIHQDHYVRLLVEKLSEQGK 71 Query: 74 YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKR 133 + G + + I + I T+ + + ++ P + + K Sbjct: 72 NYYWTWAYNHIGYNRYHEGVAILSKTPIETREILVSDVDDPTDYHTRRVALAETVVDGKE 131 Query: 134 FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTD 193 + ++ ++ + + +G D Sbjct: 132 LAVASVHLSWWDKGFQEEWARFEAVLKKLNKPLLLAGDFNNPAGQEGYQAILASPLGLQD 191 Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253 A + Y+ + +RID++ + E + + + + SD Sbjct: 192 AFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTTKELA--VENLHVVFDGNKSPQVSD 249 Query: 254 HT 255 H Sbjct: 250 HY 251 >gi|291224336|ref|XP_002732161.1| PREDICTED: TRAF and TNF receptor associated protein-like [Saccoglossus kowalevskii] Length = 350 Score = 45.2 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 41/279 (14%), Positives = 78/279 (27%), Gaps = 49/279 (17%) Query: 3 VVTVATWNVNS-----IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57 ++ + TWN++ I R + + IK +PD++ LQE ET +I Sbjct: 102 MLKLLTWNIDGLDNKNITERTKTVCSIIKRESPDVVYLQEV-------IVETFA----YI 150 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 ET +Y + S+ I+ L T + L + + Sbjct: 151 ETMCSPTYIAIPANSEQYFTTILLRKSRISLLAHKIIEFPTTKMYRNLLTVKARFRDIDL 210 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + ++ + + + L+ D +I+ D Sbjct: 211 LLMTSHMESMKNHSHERKTQLTTVLKH-------------MSEADAATAVIFGGDTNLRD 257 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI--------RIDHIML- 228 L + +S+ +KN + R D + L Sbjct: 258 YEITQIGGLPDSIGDVWQMCGSPEDAQFSW------DITKNDNLDMPFKPKCRFDRLFLR 311 Query: 229 ----SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 S + + P G SDH ++ I Sbjct: 312 QGCSSKLLPQMFMFVGTERLPCGR-FASDHWGILCEFKI 349 >gi|269968311|ref|ZP_06182334.1| putative phospholipase C precursor [Vibrio alginolyticus 40B] gi|269827084|gb|EEZ81395.1| putative phospholipase C precursor [Vibrio alginolyticus 40B] Length = 442 Score = 45.2 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 37/281 (13%), Positives = 81/281 (28%), Gaps = 39/281 (13%) Query: 4 VTVATWNVNSIRARIHNLAA---WIKEN--NPDIICLQETKTE-DKNFPFETLQSLNYHI 57 + + T+N+ ++ A ++ I ++ D++ LQE + F E + Y Sbjct: 178 LKLMTYNIWALTAIASHIGDRYELIPQHVKGYDVLALQEVFASGREAFLRELAKEYPYQT 237 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 + ++ N + + + I H Sbjct: 238 KMLDKEGVNIHDGGVIIVSRYPIVNEAQYVFPDCSGTDCFADKGVNYAEIIKGGQAYHVF 297 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + +D + R + ++ A I Y+ N Sbjct: 298 ATHTASFDTDTAREYRQ-------RQFKQIRALAQSLKIPSSETVVYSGDFNVNK----- 345 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYS--FWDYYADSWS-------KNKGIRIDHIML 228 + A + Y+ +D ++++ +N +D++M+ Sbjct: 346 ----RKFPSDYQQMIANLSAIEPHYSGYTESTFDPRINNFAGEALSGGENVEY-LDYVMV 400 Query: 229 SPEA-TSLLHSARID---TKPRGWTKP---SDHTPVIVSLD 262 S E + R+D T K SDH PV ++ Sbjct: 401 SSEYGVKSFNDNRVDVPRTTAESLWKHYNLSDHFPVSATIK 441 >gi|17231714|ref|NP_488262.1| hypothetical protein alr4222 [Nostoc sp. PCC 7120] gi|17133357|dbj|BAB75921.1| alr4222 [Nostoc sp. PCC 7120] Length = 281 Score = 45.2 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 25/265 (9%), Positives = 64/265 (24%), Gaps = 38/265 (14%) Query: 2 SVVTVATWNV---NSIRARIHNLAAWIKENNPDIICLQETK--TEDKNFPFETLQSLNYH 56 + + V WN+ N + + ++ PDII LQE + + ++++ Sbjct: 45 NSIKVLNWNIAKNNFEKFWFQDFFKILRLYQPDIIFLQEVRMGVNVEQI--MGFTNMSWA 102 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 +++ + + + E F +L Sbjct: 103 YAPNFIDAHHQT----YSGILTAAKISAIAKKVIVTKHHEPVFKTPKVSLITEYSLSHQQ 158 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + + + LEL + Sbjct: 159 QTLLTINSHLINFVDLDKFKAQLHELELAISTHRGSILFAGDFNTWSRKRAVLLEKTVIR 218 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 L ++++ + + +D+I + Sbjct: 219 LGLKEAHFTPEENKKIKRFLLSPP----------------------LDYIFY-RGLSEKP 255 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSL 261 +A++ + SDH P++ Sbjct: 256 ATAKVLDEICS----SDHKPLLAEF 276 >gi|90412878|ref|ZP_01220878.1| hypothetical protein P3TCK_26405 [Photobacterium profundum 3TCK] gi|90326237|gb|EAS42664.1| hypothetical protein P3TCK_26405 [Photobacterium profundum 3TCK] Length = 320 Score = 45.2 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 43/293 (14%), Positives = 77/293 (26%), Gaps = 33/293 (11%) Query: 2 SVVTVATWNVNSI---------------RARIHNLAAWIKENNPDIICLQETKTEDKNFP 46 + +TVA+WN+ + RA LA + + DI+ QE D+ Sbjct: 30 TTLTVASWNLQWLASDPIIIIPPPPQRTRADYQQLAHIATQLDTDILAFQEV--ADRQAI 87 Query: 47 FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 + L + Y E ++ + +P R + Sbjct: 88 EKVLTNDEYVFEFSRRQQESQHNNKRHTKPWPQFVGFAIRKGISYVRNADLHQLDLRGNK 147 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 + +K Q + + ++ Q D Sbjct: 148 SLRYGVDITLLNDGKAALRLLTVHLKSGCYSQQQSTKNRACRQLNRQFEVLEQWVDRRAA 207 Query: 167 IIWENDACFTLE-----VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW-SKNKG 220 + + G + T S S K++ Sbjct: 208 EPLPFMILGDFNRRLTLHNDQMWQQLDDGRPTGLSLYAATEGQKSQCRIRIHSKHKKHRK 267 Query: 221 IR-----IDHIMLSPEATSLLHSARI-----DTKPRGWTKPSDHTPVIVSLDI 263 IR IDHI+L A + + D + SDH P+ +SL + Sbjct: 268 IRHYPNFIDHIVLDERAKQKMVNNSFRELTSDVEVVKAFNLSDHCPITLSLSL 320 >gi|297736947|emb|CBI26148.3| unnamed protein product [Vitis vinifera] Length = 408 Score = 45.2 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 35/244 (14%), Positives = 68/244 (27%), Gaps = 26/244 (10%) Query: 21 LAAWIKENNPDIICLQETKTEDKN--FPFETLQS-LNY-HIETCGQKSYNGVAILSKYQP 76 + ++E N DI+ LQ+ K E++ P L L ++ G AILSK+ Sbjct: 137 ILEVLREVNADILALQDVKAEEEKGMKPLSDLAGALGMKYVFAESWAPEFGNAILSKWPI 196 Query: 77 IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 D D + + L H + K + I Sbjct: 197 KRWKAQKIIDGEDFRNVLKATIDVPWAGEVNFHCTQLDHLDENWRMKQTNAIIQSSDCPH 256 Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIR 196 + L ++ + D ++V + + + + + Sbjct: 257 ILAGGLNSLNGSDYSRER-----WMDIIKYYEEIGKPTPKVDVMEFLKGKEYVDAKNFAG 311 Query: 197 ATHDTHHLYSFWDYYADSWSKN------KGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 + + +N G R+D+I+ S ++ Sbjct: 312 ECEPVVII---------AKGQNVQGTCKYGTRVDYILASQDSPYKFVPRS--YSVISSKG 360 Query: 251 PSDH 254 SDH Sbjct: 361 TSDH 364 >gi|258653500|ref|YP_003202656.1| endonuclease/exonuclease/phosphatase [Nakamurella multipartita DSM 44233] gi|258556725|gb|ACV79667.1| Endonuclease/exonuclease/phosphatase [Nakamurella multipartita DSM 44233] Length = 263 Score = 45.2 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 10/35 (28%), Positives = 19/35 (54%), Gaps = 1/35 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQET 38 + + + N A +L +WI ++ D++CLQE Sbjct: 1 MRIVSVNAWGG-ALADDLLSWIADDPADVLCLQEV 34 >gi|241831529|ref|XP_002414867.1| glucose-repressible alcohol dehydrogenase, putative [Ixodes scapularis] gi|215509079|gb|EEC18532.1| glucose-repressible alcohol dehydrogenase, putative [Ixodes scapularis] Length = 368 Score = 45.2 bits (105), Expect = 0.010, Method: Composition-based stats. Identities = 36/264 (13%), Positives = 79/264 (29%), Gaps = 14/264 (5%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETCGQKSYNGVAILSKY 74 R + + PD+ICLQE + F +L S+ + V + Sbjct: 97 RRWRILEEVLSYEPDLICLQEV--DHYKFLRASLGSVGFGGTFFPKPDSPCCYVRGNNGP 154 Query: 75 QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRF 134 I +L + + FT + + + ++ + + + Sbjct: 155 DGCAIFYDKAKFELVRCEKRVLEVFTCQSNQVTLLCVFRRKLDDAELCLVTTHLKARQGG 214 Query: 135 LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDA 194 L + + + ++ L F ++ + + + + Q L++ Sbjct: 215 LLSSLRNEQGKDLLDFVQNHRGRRPTIIAGDFNAEPTEPVYKTLLAQRDLSLESSYALQP 274 Query: 195 IRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE---ATSLL---HSARIDTK-PRG 247 + Y+ W D ++ ID+I S + L +I Sbjct: 275 GSGRREQEPPYTTWKIREDGEVRHT---IDYIFFSKADFSLEARLDFPTEDQIGPGRVPS 331 Query: 248 WTKPSDHTPVIVSLDIPEPRKKQQ 271 SDH ++ L +P +Q Sbjct: 332 LAYASDHFSLVADLALPFRISDEQ 355 >gi|271966389|ref|YP_003340585.1| hypothetical protein Sros_5052 [Streptosporangium roseum DSM 43021] gi|270509564|gb|ACZ87842.1| conserved hypothetical protein [Streptosporangium roseum DSM 43021] Length = 511 Score = 45.2 bits (105), Expect = 0.011, Method: Composition-based stats. Identities = 36/296 (12%), Positives = 75/296 (25%), Gaps = 46/296 (15%) Query: 4 VTVATWN-------VNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56 + +WN V R L ++ + + D++ +QET + E ++L + Sbjct: 225 LRTMSWNLWHGGSQVKG--GREKQL-KFLLDRDVDVVGMQETSSTSAK---ELAEALGW- 277 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 ++ + I+S+Y + L I + Y P+G Sbjct: 278 ---DHYQAGADLGIVSRYPIVSRGPLPSESGLAGINAKIRLDDRHEVAVWNVHLGYTPYG 334 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + R R E +GD + Sbjct: 335 PYDACFGKWGVERLMAREAESKRTRQIQEIMSAMSGDLADASRTPVLLTGDFNAPSHLDW 394 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLY-------------SF---WDYYADSWSKN-- 218 + T Y ++ + + + + Sbjct: 395 TAETRKCGYDSVSWPTSVAPEQSGMKDSYRVAHPDPVADPGITWSPIYTTFTGGYDHDGH 454 Query: 219 KGI-----RIDHIMLSPEATSLLHSARID------TKPRGWTKPSDHTPVIVSLDI 263 KG RID + + A ++ + SDH V+ + + Sbjct: 455 KGEPEPQDRIDFVHYKGDLKVKSSDAVVEGTPAPIPNHKDNAWTSDHAAVLTTFAV 510 >gi|167031164|ref|YP_001666395.1| endonuclease/exonuclease/phosphatase [Pseudomonas putida GB-1] gi|166857652|gb|ABY96059.1| Endonuclease/exonuclease/phosphatase [Pseudomonas putida GB-1] Length = 284 Score = 45.2 bits (105), Expect = 0.011, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 14/60 (23%) Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 +F + +DHI+LSP T L + +P SDH PV V + +P+ Sbjct: 228 TFPSWRPQ-------RCLDHILLSPSLT--LERVEVLAQP-----ISDHLPVAVEIRLPD 273 >gi|170724257|ref|YP_001751945.1| endonuclease/exonuclease/phosphatase [Pseudomonas putida W619] gi|169762260|gb|ACA75576.1| Endonuclease/exonuclease/phosphatase [Pseudomonas putida W619] Length = 284 Score = 45.2 bits (105), Expect = 0.011, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 14/60 (23%) Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 +F + +DHI+LSP T L + +P SDH PV V + +P+ Sbjct: 228 TFPSWRPQ-------RCLDHILLSPSLT--LERVEVLAQP-----ISDHLPVAVEIRLPD 273 >gi|77407890|ref|ZP_00784642.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus agalactiae COH1] gi|77173535|gb|EAO76652.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus agalactiae COH1] Length = 271 Score = 45.2 bits (105), Expect = 0.011, Method: Composition-based stats. Identities = 41/283 (14%), Positives = 80/283 (28%), Gaps = 38/283 (13%) Query: 5 TVATWN------VNSIRARIHNLAAW---IKENNPDIICLQETKTEDKNFPFETLQSLNY 55 T N VN + L I DIICLQE S NY Sbjct: 3 KCLTLNTHSWMEVN----ALKKLFDLAEHIFREKYDIICLQEV--NQSISSPLATSSPNY 56 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 H + L + +L G + ++ + + I +L Sbjct: 57 HPIEGTPALHQDNFAL----QLVHYLNLQGLHYHWTWAYNHIGYSKYHEGVAILSLKPLK 112 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + I + DD+ + R A L + + + ++ Sbjct: 113 PDDILVSAVDDETDYHTRRALVAETTLNDKVVTVVS--LHLSWFEKGFAEEWKRLETTLL 170 Query: 176 TLEVRQSFQKLQNMGF---------------TDAIRATHDTHHLYSFWDYYADSWSKNKG 220 +E N D+ + + ++ K Sbjct: 171 EVETPLLLMGDFNNPTGNQGYELVLNSPLALKDSHQIANHVFGDHTIMADIDGWEGNKKA 230 Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +++DHI S + + S+++ + SDH + ++L++ Sbjct: 231 LKVDHIFTSEDL--SISSSQVVFEGGEAPVVSDHYGLEITLNL 271 >gi|227485102|ref|ZP_03915418.1| endonuclease/exonuclease/phosphatase family protein [Anaerococcus lactolyticus ATCC 51172] gi|227236935|gb|EEI86950.1| endonuclease/exonuclease/phosphatase family protein [Anaerococcus lactolyticus ATCC 51172] Length = 353 Score = 45.2 bits (105), Expect = 0.011, Method: Composition-based stats. Identities = 38/307 (12%), Positives = 72/307 (23%), Gaps = 51/307 (16%) Query: 5 TVATWN-------------------VNSIRA-----RIHNLAAWIKENNPDIICLQETKT 40 + TWN VN I + ++ IK NPD++ LQE Sbjct: 56 KILTWNIGYGGLDKDTDFFMDGGKMVNPISKDHVENALAGISKEIKTINPDLLFLQEVDA 115 Query: 41 EDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT 100 D + + + Y + S + P I + E + Sbjct: 116 -DSQRTY-HINEVEYFDKELNGASTFAFNYKVGFVPFPIPPMGKVNSGIFTKSKFEIESS 173 Query: 101 INTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP 160 Q + N G Q Sbjct: 174 YRYQQPVPHKWPVRLANLKRGFNASYLPIEGSDKYLVLVNVHLDAYESGSNGRLAQTKQI 233 Query: 161 HDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF-WDYYADSWSKN- 218 + + + + + + + + Y + D ++ +N Sbjct: 234 IAFMTEEYNKGN-YLIVGGDFNQELRKGYEANVPEGIWNPSPFPYDYLTDNIKPTFDENT 292 Query: 219 KGIR---------------IDHIMLSPEA-TSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 R ID ++S + I SDH PV++ Sbjct: 293 NSSRLNHKPYDPNDSYECIIDGFLVSDNVEVKSVKGQAI------GFVNSDHNPVLLEFS 346 Query: 263 IPEPRKK 269 + E ++ Sbjct: 347 LKENKED 353 >gi|147902860|ref|NP_001090474.1| hypothetical protein LOC779387 [Xenopus laevis] gi|83405601|gb|AAI10749.1| MGC130968 protein [Xenopus laevis] Length = 257 Score = 45.2 bits (105), Expect = 0.011, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFET-LQSLNYHIET 59 R+ N+ +++ N DI+CLQE + + L+SL YH E Sbjct: 71 RLPNILKELEDMNADILCLQEVQENHYQTQIKPSLESLGYHCEY 114 >gi|301309385|ref|ZP_07215327.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 20_3] gi|300832474|gb|EFK63102.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 20_3] Length = 304 Score = 45.2 bits (105), Expect = 0.011, Method: Composition-based stats. Identities = 39/283 (13%), Positives = 91/283 (32%), Gaps = 35/283 (12%) Query: 2 SVVTVATWNV--NSIRARIH--NLAAWIKENNPDIICLQETKTEDKN------FPFETLQ 51 + V V+++N+ N++ ++ A I+ + DI+ +QE +++ P E + Sbjct: 26 ATVKVSSFNIWLNTLGGKLPPSQTAKVIEASQTDIVGIQEGHIYEEDGIKHDHVP-EIAE 84 Query: 52 SLNYHIETCGQKSYN-------GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 SL +H+ G+ Y I++ + +I Sbjct: 85 SLGFHLFNQGEGHYILSRYPVVDSTASRYGVKIQVGKDKFCWMFNCHLYYIPYQPYQLNG 144 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 ++ + + + R+ + Q ++ P+ GD+N + Sbjct: 145 IPYGDYPFIDTEEEAIRFANEARREEVTRYQKDIQQVMKEGYPVFLTGDFNEP--SFLDW 202 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH---HLYSFWDYYADSWSKNKGI 221 + + + +G D+ R H Y++ ++ + Sbjct: 203 TQRAADAGIHKIKVEWPATKAFSEIGMNDSYRTIHPDEVSTPGYTWTPVPSEQEILD--- 259 Query: 222 RIDHIMLSPEATSLLHSARI------DTKPRGWTKPSDHTPVI 258 R+D ++ S + + I + PSDH V Sbjct: 260 RLDFVLYSG---CKVTDSFITGESETTSDVVVSPYPSDHRMVT 299 >gi|332089000|gb|EGI94112.1| endonuclease/Exonuclease/phosphatase family protein [Shigella boydii 5216-82] Length = 253 Score = 45.2 bits (105), Expect = 0.011, Method: Composition-based stats. Identities = 34/267 (12%), Positives = 64/267 (23%), Gaps = 32/267 (11%) Query: 5 TVATWNVN-SI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN--YH 56 V T N++ R + L ++ + DI+CLQE +++ H Sbjct: 11 KVLTINIHKGFTAFNRRFILPELRDAVRTVSADIVCLQEV-MGAHEVHPLHVENWPDTSH 69 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 E ++ A E + +++ R Sbjct: 70 YEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVP 129 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + + R +Q L E + D + D + N Sbjct: 130 PMTGKAIHVMCVHLGLREAHRQAQLAMLAEWVNELPDGEPVLVEGDFNDWRQKANHPLKV 189 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 + +R+D I + + Sbjct: 190 QAGLDEIFTRAHGRPARTFPVQFPL-------------------LRLDRIYV----KNAS 226 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263 SA R W SDH P+ + + Sbjct: 227 ASAPTALPLRTWRHLSDHAPLSAEIHL 253 >gi|312602724|ref|YP_004022569.1| endonuclease/Exonuclease/phosphatase family protein [Burkholderia rhizoxinica HKI 454] gi|312170038|emb|CBW77050.1| Endonuclease/Exonuclease/phosphatase family protein [Burkholderia rhizoxinica HKI 454] Length = 273 Score = 45.2 bits (105), Expect = 0.011, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 10/48 (20%) Query: 1 MSVV-----TVATWNVNS----IRAR-IHNLAAWIKENNPDIICLQET 38 M+ + +AT+N++ R R +A + E + DII LQE Sbjct: 1 MTTMAYSELRIATYNIHGAGGRWRQRSTQRIAGVVAELDADIIALQEV 48 >gi|293365069|ref|ZP_06611786.1| endonuclease/exonuclease/phosphatase family protein RgfB [Streptococcus oralis ATCC 35037] gi|307702222|ref|ZP_07639182.1| endonuclease/Exonuclease/phosphatase family protein [Streptococcus oralis ATCC 35037] gi|291316519|gb|EFE56955.1| endonuclease/exonuclease/phosphatase family protein RgfB [Streptococcus oralis ATCC 35037] gi|307624235|gb|EFO03212.1| endonuclease/Exonuclease/phosphatase family protein [Streptococcus oralis ATCC 35037] Length = 271 Score = 45.2 bits (105), Expect = 0.011, Method: Composition-based stats. Identities = 35/267 (13%), Positives = 80/267 (29%), Gaps = 20/267 (7%) Query: 4 VTVATWNVNSI--RARIHNLAAWIK---ENNPDIICLQETKTEDKNFPFETLQSLNY--- 55 + T N +S + ++ E + D+IC QE + E + +Y Sbjct: 1 MKFLTLNTHSWMEKEAEEKFQILLQDILEKDYDLICFQEI--NQEMTSPEVEVNNHYQAL 58 Query: 56 ------HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 H + Q +A K + G D + I + I + + + Sbjct: 59 PSAEPIHQDHYVQLLVEKLAEKGKNYYWTWAYNHIGYDRYHEGVAILSKTPIKAREILVS 118 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG-DYNIIPQPHDCYNPII 168 ++ P + K + ++ + + + + + Sbjct: 119 DVDDPTDYHTRRVALVETEVEGKELALASVHLSWWDKGFQEEWARFEAVLKELNKPLILA 178 Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 + + E Q+ +G DA + Y+ + +RID++ Sbjct: 179 GDFNNPAGQEGNQAILASP-LGLQDAFEVAKERSGSYTVPPEIDGWKGNTEPLRIDYVFT 237 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHT 255 + E + S ++ + + SDH Sbjct: 238 TKELE--VESLQVVFDGQNSPQVSDHY 262 >gi|94995179|ref|YP_603277.1| Endonuclease/Exonuclease/phosphatase family protein [Streptococcus pyogenes MGAS10750] gi|94548687|gb|ABF38733.1| Endonuclease/Exonuclease/phosphatase family protein [Streptococcus pyogenes MGAS10750] Length = 279 Score = 45.2 bits (105), Expect = 0.011, Method: Composition-based stats. Identities = 37/276 (13%), Positives = 86/276 (31%), Gaps = 20/276 (7%) Query: 3 VVTVATWNVNSIRAR--IHNLAAW---IKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57 + V T N +S + L A I DIICLQE ++ E L + Sbjct: 8 MTKVLTLNTHSWMQANTLKKLVALAEHILAEKYDIICLQEI---NQLIESELATDLPRYQ 64 Query: 58 E-----TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 + + + + I + + + + E ++ Q + + ++ Sbjct: 65 ALSGTPSIHKDHFALLLIHYLQKRGQHYYWSWAYNHIGYDIYQEGVAILSKQPIHVSDIL 124 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLI---FAGDYNIIPQPHDCYNPIIW 169 + T+ + + + F G++ + + N + Sbjct: 125 VSAMADETNYHTRRSLIAKTTLDGKEVAVVNVHLSWFDKGFLGEWEKLEKELLTLNCPLL 184 Query: 170 ENDACFTLEVRQSFQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227 + +Q + + D+ + +S + +++DH+ Sbjct: 185 LMGDFNNPTDQDGYQVMMGSPLDLQDSHKVADHVFGDHSIVADIDGWQGNKEALKVDHVF 244 Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 S + + S++I + SDH + V+LD Sbjct: 245 TSKDFI--IRSSKITFEGGDAPVVSDHYGLEVTLDW 278 >gi|10140689|gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse transcriptase [Oryza sativa Japonica Group] Length = 1382 Score = 45.2 bits (105), Expect = 0.011, Method: Composition-based stats. Identities = 35/261 (13%), Positives = 69/261 (26%), Gaps = 33/261 (12%) Query: 5 TVATW--NVNSI-RARIHNLAAWI-KENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 + TW N + A W+ K P ++ L ETK DK Sbjct: 5 KLVTWGRNCRGLGSAATVGELRWLVKSLRPSLVFLSETKMRDKQ---------------A 49 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 ++ S E ++ F + + + LP Sbjct: 50 RNLMWSLGFSGSFAVSCEGLSGGLALFWTTAYTVSLRGFNSHFIDVLVSTEELPPWRISF 109 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + + + P + GD+N + + Sbjct: 110 VYGEPKRELRHFFWNLLRRLHDQWRGPWLCCGDFNEVLCLDEHLGMRERSEPHMQHFRSC 169 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 L ++GF ++ W D+ + N +R+D + + E + Sbjct: 170 LDDCGLIDLGFVGP---------KFT-WSNKQDA-NSNSKVRLDRAVANGEFSRYFEDCL 218 Query: 241 IDTKPRGWTKPSDHTPVIVSL 261 ++ SDH + + L Sbjct: 219 VENVITTS---SDHYAISIDL 236 >gi|190344380|gb|EDK36047.2| hypothetical protein PGUG_00145 [Meyerozyma guilliermondii ATCC 6260] Length = 497 Score = 45.2 bits (105), Expect = 0.011, Method: Composition-based stats. Identities = 41/313 (13%), Positives = 69/313 (22%), Gaps = 70/313 (22%) Query: 3 VVTVATWNV-NSIRARI-HNLAAWIKENN---PDI---------ICLQET-KTEDKNF-- 45 + + NV N R + +W+K I + LQE K + + Sbjct: 196 TFRIYSHNVRNGGRDILDPGEESWLKRYRKITASIKFNSQLNTVVALQEVYKFQLDDIMR 255 Query: 46 -------PFE-TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA 97 P E ++ Q + + + + D +E Sbjct: 256 DLNRYSPPEEPEWEAYGVGRIDGDQLGEFVPILFKTSEWEMVFYDSIWLNEDNPRMALEG 315 Query: 98 TFTINTQTLRIGNLYLPHGNPITSTKYDDKIS-----WIKRFLRFASQRLELEEPLIFAG 152 + + L GN I + + P G Sbjct: 316 WDAKYLRIVSYVTLKHVSGNYINVFNTHLDHMGELSKQGSAQIILDKMNSINQWPSFLCG 375 Query: 153 DYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYA 212 D N P ++ A + H S + Sbjct: 376 DLNTEPNEKAYQIITEQFRNSA------------------KLTTAFNKYGHSKSTVTGFE 417 Query: 213 DSWSKNKGIRIDHIML------------------SPE----ATSLLHSARIDTKPRGWTK 250 N G ID+I SP L S + Sbjct: 418 GEVLLNGGQNIDYIFAPSYTAKLGETVLCDKLTTSPPSERYLDLRLKSFGMLHSKFNGLY 477 Query: 251 PSDHTPVIVSLDI 263 SDH P++ + Sbjct: 478 MSDHRPIVADFTL 490 >gi|291007593|ref|ZP_06565566.1| hypothetical protein SeryN2_23964 [Saccharopolyspora erythraea NRRL 2338] Length = 295 Score = 45.2 bits (105), Expect = 0.011, Method: Composition-based stats. Identities = 39/253 (15%), Positives = 70/253 (27%), Gaps = 24/253 (9%) Query: 16 ARIHNLAAWIKENNPDIICLQE-----TKTEDKNFPFETLQSLNYHIETCGQKSYNGVAI 70 R LA + +P ++ +QE K + P +Y G++ Sbjct: 59 TRRPILAELLNAESPTLLGVQEALYRQVKQVHADIP------AHYDWIGLGREGGGRGEF 112 Query: 71 LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISW 130 +S Y V L D + T+ ++ + T ++ + Sbjct: 113 MSIYYDTRRVEPLDYDHFWLSDTPNVIGSASWGNTVVRMVTWVRFRDLRTGREFTHVNTH 172 Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG 190 + QR AG +P + + + Sbjct: 173 FDHQSENSRQRSAALVRDRIAGFDAGLPVLLTGDFNTRAGDSESYRILTSGGLADGWETA 232 Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 A +F Y G RID ++ + + A I+ + Sbjct: 233 AERLTPAWG------TFGGYEE---PVEGGDRIDWLLANDRV--RVLKAAINPFRKDGWF 281 Query: 251 PSDHTPV--IVSL 261 PSDH PV +V L Sbjct: 282 PSDHLPVHALVEL 294 >gi|260823635|ref|XP_002606186.1| hypothetical protein BRAFLDRAFT_126502 [Branchiostoma floridae] gi|229291525|gb|EEN62196.1| hypothetical protein BRAFLDRAFT_126502 [Branchiostoma floridae] Length = 560 Score = 45.2 bits (105), Expect = 0.011, Method: Composition-based stats. Identities = 12/169 (7%), Positives = 30/169 (17%), Gaps = 12/169 (7%) Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 YH H + + Sbjct: 373 YHHYPWSW------CYTWSNDHGCTRYHHYPWSWCNTRSDDHGCARYHHYPWNRCYTWSH 426 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 + + Y + ++ + ++ + Y W N Sbjct: 427 NYSCNRYYHYPWSWCNTRSDHHGCTRYHHYPWSWCYTWSHHYGCTRYHHYP-WSWCNTRS 485 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF-----WDYYADSWSKN 218 + + T + +H Y + W ++ N Sbjct: 486 HDHGCTRYHHYPWSRCNTRSHDHGCTRYHNYPWNRCYTWSHHYGCTRNN 534 Score = 44.8 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 12/162 (7%), Positives = 29/162 (17%), Gaps = 9/162 (5%) Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 YH H + + Sbjct: 333 YHHYPWSW------CNTRSDDHGCTRYHHYPWSWCNTRSDDHGCTRYHHYPWSWCYTWSN 386 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 Y + ++ + +N + + P W N Sbjct: 387 DHGCTRYHHYPWSWCNTRSDDHGCARYHHYPWNRCYTWSHNYSCNRY-YHYPWSWCNTRS 445 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLY--SFWDYYADS 214 + + +T + +H Y S+ + + Sbjct: 446 DHHGCTRYHHYPWSWCYTWSHHYGCTRYHHYPWSWCNTRSHD 487 Score = 44.8 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 15/170 (8%), Positives = 30/170 (17%), Gaps = 12/170 (7%) Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 YH H + + N Sbjct: 393 YHHYPWSW------CNTRSDDHGCARYHHYPWNRCYTWSHNYSCNRYYHYPWSWCNTRSD 446 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 H Y + ++ ++ + Y N Sbjct: 447 HHGCTRYHHYPWSWCYTWSHHYGCTRYHHYPWSWCNTRSHDHGCTRYHHYPWSR-CNTRS 505 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF-----WDYYADSWSKNK 219 + N +T + ++ Y++ W SKN Sbjct: 506 HDHGCTRYHNYPWNRCYTWSHHYGCTRNNDYTWSWCNTWSDDHGCTSKNY 555 >gi|94989322|ref|YP_597423.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pyogenes MGAS9429] gi|94993210|ref|YP_601309.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pyogenes MGAS2096] gi|94542830|gb|ABF32879.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pyogenes MGAS9429] gi|94546718|gb|ABF36765.1| Endonuclease/Exonuclease/phosphatase family protein [Streptococcus pyogenes MGAS2096] Length = 279 Score = 45.2 bits (105), Expect = 0.011, Method: Composition-based stats. Identities = 37/276 (13%), Positives = 85/276 (30%), Gaps = 20/276 (7%) Query: 3 VVTVATWNVNSIRAR--IHNLAAW---IKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57 + V T N +S + L A I DIICLQE ++ E L + Sbjct: 8 MTKVLTLNTHSWMQANTLKKLVALAEHILAEKYDIICLQEI---NQLIESELATDLPRYQ 64 Query: 58 E-----TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 + + + + I + + + + E ++ Q + + ++ Sbjct: 65 ALSGTPSIHKDHFALLLIHYLQKRGQHYYWSWAYNHIGYDIYQEGVAILSKQPIHVSDIL 124 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLI---FAGDYNIIPQPHDCYNPIIW 169 + T + + + F G++ + + N + Sbjct: 125 VSAMADETDYHTRRSLIAKTTLDGKEVAVVNVHLSWFDKGFLGEWEKLEKELLTLNCPLL 184 Query: 170 ENDACFTLEVRQSFQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227 + +Q + + D+ + +S + +++DH+ Sbjct: 185 LMGDFNNPTDQDGYQVMMGSPLNLQDSHKVADHVFGDHSIVADIDGWQGNKEALKVDHVF 244 Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 S + + S++I + SDH + V+LD Sbjct: 245 TSKDFI--IRSSKITFEGGDAPVVSDHYGLEVTLDW 278 >gi|116627133|ref|YP_819752.1| hypothetical protein STER_0240 [Streptococcus thermophilus LMD-9] gi|116100410|gb|ABJ65556.1| Metal-dependent hydrolase [Streptococcus thermophilus LMD-9] Length = 259 Score = 45.2 bits (105), Expect = 0.011, Method: Composition-based stats. Identities = 25/245 (10%), Positives = 62/245 (25%), Gaps = 15/245 (6%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQ-SLNYHIETCGQKSYNGVAIL-------- 71 L I + DIIC QE ++ ++ YH+ + Sbjct: 12 LKEQILKAQYDIICFQEV---NQEIETAAVETDAYYHVLPSAISIHQDHFFHLLVEKLAE 68 Query: 72 -SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISW 130 + G D + + + + + + ++ P + Sbjct: 69 EGLQYHWTWAYNHIGYDHLNEGVAVLSRQPLTASEILVSDVDDPTDYHTRRVAVAETTVD 128 Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG 190 ++ + ++ I+ + + Sbjct: 129 GRKVAVASIHLSWWDKGFQEEWARIEERFQSIGKPLILAGDFNNPAGREGYQTILASPLK 188 Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 D+ + T+ Y+ + +RID++ S E ++ + + Sbjct: 189 LQDSFQVDQKTNGSYTVGPGIDGWKGNEEPLRIDYVFASQEWA--VNRLSVIFDGNNQSL 246 Query: 251 PSDHT 255 SDH Sbjct: 247 VSDHY 251 >gi|56807835|ref|ZP_00365677.1| COG3568: Metal-dependent hydrolase [Streptococcus pyogenes M49 591] Length = 260 Score = 45.2 bits (105), Expect = 0.011, Method: Composition-based stats. Identities = 33/253 (13%), Positives = 79/253 (31%), Gaps = 15/253 (5%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE-----TCGQKSYNGVAILSKYQ 75 LA I DIICLQE ++ E L + + + + + I + Sbjct: 12 LAEHILAEKYDIICLQEI---NQLIESELATDLPRYQALSGTPSIHKDHFALLLIHYLQK 68 Query: 76 PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135 + + + E ++ Q + + ++ + + T + Sbjct: 69 RGQHYYWSWAYNHIGYDIYQEGVAILSKQPIHVSDILVSAMDDETDYHTRRSLIAKTTLD 128 Query: 136 RFASQRLELEEPLI---FAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN--MG 190 + + F G++ + + N + + +Q + + Sbjct: 129 GKEVAVVNVHLSWFDKGFLGEWEKLEKELLTLNCPLLLMGDFNNPTDQDGYQVMMGSPLD 188 Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 D+ + +S + +++DH+ S + + S++I + Sbjct: 189 LQDSHKVADHVFGDHSIVADIDGWQDNKEALKVDHVFTSKDFI--IRSSKITFEGGDAPV 246 Query: 251 PSDHTPVIVSLDI 263 SDH + V+LD Sbjct: 247 VSDHYGLEVTLDW 259 >gi|167836386|ref|ZP_02463269.1| endonuclease/exonuclease/phosphatase family superfamily protein [Burkholderia thailandensis MSMB43] Length = 128 Score = 45.2 bits (105), Expect = 0.011, Method: Composition-based stats. Identities = 9/38 (23%), Positives = 17/38 (44%), Gaps = 4/38 (10%) Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 D + ++ + ID G + SDH P+++ L Sbjct: 92 DFVFVTDTLAHRISRCEID----GAVRASDHQPIVLEL 125 >gi|147798883|emb|CAN65940.1| hypothetical protein VITISV_038402 [Vitis vinifera] Length = 2014 Score = 45.2 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 10/45 (22%) Query: 2 SVVTV--ATWNV-----NSIRARIHNLAAWIKENNPDIICLQETK 39 S + + +WNV NS R I + I+ D+ C+QETK Sbjct: 1186 SPMKIRLLSWNVRGANDNSKRKVIKAM---IRSQKVDLFCVQETK 1227 >gi|254389420|ref|ZP_05004647.1| hypothetical protein SSCG_01974 [Streptomyces clavuligerus ATCC 27064] gi|294815797|ref|ZP_06774440.1| Endonuclease/exonuclease/phosphatase [Streptomyces clavuligerus ATCC 27064] gi|326444141|ref|ZP_08218875.1| hypothetical protein SclaA2_23884 [Streptomyces clavuligerus ATCC 27064] gi|197703134|gb|EDY48946.1| hypothetical protein SSCG_01974 [Streptomyces clavuligerus ATCC 27064] gi|294328396|gb|EFG10039.1| Endonuclease/exonuclease/phosphatase [Streptomyces clavuligerus ATCC 27064] Length = 348 Score = 45.2 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 5/46 (10%) Query: 221 IRIDHIMLSPEATSLLHSARIDTKPR---GWTKP--SDHTPVIVSL 261 RID +L P + L R PR G +P SDH PV V L Sbjct: 300 RRIDLFLLGPGLAARLARYRAVDHPRLTAGPDRPAASDHRPVTVEL 345 >gi|319956480|ref|YP_004167743.1| endonuclease/exonuclease/phosphatase [Nitratifractor salsuginis DSM 16511] gi|319418884|gb|ADV45994.1| Endonuclease/exonuclease/phosphatase [Nitratifractor salsuginis DSM 16511] Length = 531 Score = 45.2 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 44/342 (12%), Positives = 96/342 (28%), Gaps = 74/342 (21%) Query: 2 SVVTVATWNV--------------------NS-----IRARIHNLAAWIKENNPDIICLQ 36 + +A+WNV + +R ++ + A I + + D+I LQ Sbjct: 20 RTIKIASWNVENLFDMHYQGTEYEEYVPGRHGWSEAMLRKKLEHTAQVICDLDADVIGLQ 79 Query: 37 ET-------KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLD 89 E + + Y T G+ + A+LS+ ++ Sbjct: 80 EIENDEVLSRLQR--LLKRVGCPYPYRAVTGGRAPVH-TALLSRIPLAKVRDLPVTRYGR 136 Query: 90 VQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLI 149 + + + + + G Y + LR +L + Sbjct: 137 QRPILEATLRLDPSLKIFVNHWRSKRGPESERILYA-------KALRKRLMKLPPSTEYL 189 Query: 150 FAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFW- 208 GD+N + +P + + + + + M ++ Y+ W Sbjct: 190 LLGDFNSDWEEFRIIDPKLNDTGGITGINQVMATTRDGRMVRYRDLKRGQREFLHYNLWL 249 Query: 209 ----DYY-ADSWSKNKGIRIDHIMLSPEATS-----LLHSA----------RIDTKPRGW 248 + ++ NK ID +++ P + + I + W Sbjct: 250 DLPASQRWSHNFYGNKEA-IDAMLIPPSLADGRRWEYVRGSFGVYRPSYLFGIHGEILRW 308 Query: 249 ---------TKPSDHTPVIVSLD-IPEPRKKQQDSTSQNMKP 280 SDH P+ +P+ K ++ P Sbjct: 309 GYRHGKHTGKGFSDHLPIYARFQTLPDLPVKTSAPEAKKPLP 350 >gi|317031358|ref|XP_001393252.2| reverse transcriptase [Aspergillus niger CBS 513.88] Length = 1646 Score = 45.2 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 15/42 (35%), Gaps = 4/42 (9%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 ID ++ S T + I G SDH + D P Sbjct: 632 IDLVLASDNLTDSVIKCAIL----GTEHGSDHCAIETVFDAP 669 >gi|224008636|ref|XP_002293277.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220971403|gb|EED89738.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 1850 Score = 45.2 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 32/285 (11%), Positives = 68/285 (23%), Gaps = 40/285 (14%) Query: 3 VVTVATWNVNSIRARIHNL-----AAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57 ++ VA N+N I+E DI+ + E ++ + ++ Q Sbjct: 54 ILRVAINNINGTTFHQKGFEVAHEIQTIQELGIDIMAMCE---SNRAWTYKNKQEYERQT 110 Query: 58 ETCGQKSYNGVAIL-------------------SKYQPIEIVTHLPGDDLDVQARFIEAT 98 + A + + T G ++ R Sbjct: 111 HLLWHNTRTVFASCPTGAEGYQPGGNVLNINGPAAGRVKATGTDKWGRFCWMELRGQRDE 170 Query: 99 FTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP 158 + R+ +T+ R ++ L+ L Sbjct: 171 GWVIISAYRVCQEESHKPGALTAYMQQYTAMLSAGITRPNPRQQILDNLLHLITSKREQG 230 Query: 159 QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN 218 + + + + + Y+ +S Sbjct: 231 FRPILLMDANEDWVTNSHGKNQLADFMAAANLQDAFYERHQQSPPTYT----RGNS---- 282 Query: 219 KGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 R+D+I++ P A + G SDH V D+ Sbjct: 283 ---RLDYILVDPVALPCIRRVGYLGTHEGN--FSDHCLEYVDFDM 322 >gi|134077782|emb|CAK45822.1| unnamed protein product [Aspergillus niger] Length = 1652 Score = 45.2 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 15/42 (35%), Gaps = 4/42 (9%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 ID ++ S T + I G SDH + D P Sbjct: 605 IDLVLASDNLTDSVIKCAIL----GTEHGSDHCAIETVFDAP 642 >gi|90409692|ref|ZP_01217709.1| hypothetical protein P3TCK_02976 [Photobacterium profundum 3TCK] gi|90329045|gb|EAS45302.1| hypothetical protein P3TCK_02976 [Photobacterium profundum 3TCK] Length = 292 Score = 45.2 bits (105), Expect = 0.012, Method: Composition-based stats. Identities = 34/246 (13%), Positives = 60/246 (24%), Gaps = 17/246 (6%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQP 76 R + + + N DI LQE + Y G+ N Sbjct: 54 RKKIVTSIFHDQNIDIAGLQE--PFSDQIMYLARNLPEYSWVGVGRDDGNAKGEAVPIFY 111 Query: 77 IEIVT----HLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIK 132 + + G ++ I Sbjct: 112 RSDKYVKLSGGTFWLSKTPELVASIGWDAELTRISTWVRLEEKGTGKRVLVFNSHFDHIG 171 Query: 133 RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192 + R S +L + GD N + + T Sbjct: 172 KVARQESAKLMSDRAKEIIGDGN----DAVIVLGDLNFERTDTVSYHAITNLFNDAREIT 227 Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPS 252 A D Y++ Y ++ S++ ID+I ++ T +++ R S Sbjct: 228 KAPFKGADNGKAYTYHGY-GNAPSED----IDYIFVNDSLT--VNTFEYKNVIRDGIYSS 280 Query: 253 DHTPVI 258 DH VI Sbjct: 281 DHLSVI 286 >gi|325096241|gb|EGC49551.1| inositol phosphosphingolipids phospholipase C [Ajellomyces capsulatus H88] Length = 500 Score = 44.8 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 50/346 (14%), Positives = 88/346 (25%), Gaps = 66/346 (19%) Query: 2 SVVTVATWNVNSIRA----RIHNLAAW-----IKENNPDIICLQETKTEDK--NFPFETL 50 + + V T N ++ R L + EN P I+ LQE + + N ET Sbjct: 11 AKINVLTLNCWGLKYISEYRRERLIEIGKRIALSENTPHIVGLQECWSREDYHNIRRETR 70 Query: 51 QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ---TLR 107 + L Y G+AILSK+ E H + A F + +R Sbjct: 71 EILPYGKFYFSGIFGGGLAILSKWPIEESTMHAYPLNGRPSAIFRGDWYVGKGVACARIR 130 Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP--------- 158 IG + + + + E + Sbjct: 131 IGPAAADIVDVFCTHLHAPYEREPRDSYICHRTAQAWEIAKLMKAAAEKGHLVVGLGDFN 190 Query: 159 -----------------QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT 201 + + A + + + F + Sbjct: 191 MLPQSFAHRLITSHAPVKDVWGHLHPDSSIGAAIDSAEMSRKKPVPSADFNISENGATCD 250 Query: 202 HHLYSF-WDYYADSWSKNKG-------------IRIDHIMLSPEATSLLHS--------- 238 L ++ W K +G R+D+I + + S S Sbjct: 251 SILNTWRWSKSQQKRLKREGPMPVDGQRPDPLAKRLDYIFVGDGSFSNFSSLRKWDIESA 310 Query: 239 --ARIDTKPRGWTKPSDHTPVIVSLDIP-EPRKKQQDSTSQNMKPI 281 ++ P SDH V ++ + D + PI Sbjct: 311 RVCMLERHPHLHCSLSDHFGVEATIKLDIAKEADDGDEGPSSFLPI 356 >gi|296133066|ref|YP_003640313.1| Endonuclease/exonuclease/phosphatase [Thermincola sp. JR] gi|296031644|gb|ADG82412.1| Endonuclease/exonuclease/phosphatase [Thermincola potens JR] Length = 224 Score = 44.8 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 7/42 (16%) Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 RID+I++S I++ SDH PV+ +L++ Sbjct: 190 RIDYILVSENIVDYSLEV-INSD------ASDHLPVLATLEV 224 >gi|240278178|gb|EER41685.1| inositol phosphosphingolipids phospholipase C [Ajellomyces capsulatus H143] Length = 500 Score = 44.8 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 50/346 (14%), Positives = 88/346 (25%), Gaps = 66/346 (19%) Query: 2 SVVTVATWNVNSIRA----RIHNLAAW-----IKENNPDIICLQETKTEDK--NFPFETL 50 + + V T N ++ R L + EN P I+ LQE + + N ET Sbjct: 11 AKINVLTLNCWGLKYISEYRRERLIEIGKRIALSENTPHIVGLQECWSREDYHNIRRETR 70 Query: 51 QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ---TLR 107 + L Y G+AILSK+ E H + A F + +R Sbjct: 71 EILPYGKFYFSGIFGGGLAILSKWPIEESTMHAYPLNGRPSAIFRGDWYVGKGVACARIR 130 Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP--------- 158 IG + + + + E + Sbjct: 131 IGPAAADIVDVFCTHLHAPYEREPRDSYICHRTAQAWEIAKLMKAAAEKGHLVVGLGDFN 190 Query: 159 -----------------QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT 201 + + A + + + F + Sbjct: 191 MLPQSFAHRLITSHAPVKDVWGHLHPDSSIGAAIDSAEMSRKKPVPSADFNISENGATCD 250 Query: 202 HHLYSF-WDYYADSWSKNKG-------------IRIDHIMLSPEATSLLHS--------- 238 L ++ W K +G R+D+I + + S S Sbjct: 251 SILNTWRWSKSQQKRLKREGPMPVDGQRPDPLAKRLDYIFVGDGSFSNFSSLRKWDIESA 310 Query: 239 --ARIDTKPRGWTKPSDHTPVIVSLDIP-EPRKKQQDSTSQNMKPI 281 ++ P SDH V ++ + D + PI Sbjct: 311 RVCMLERHPHLHCSLSDHFGVEATIKLDIAKEADDGDEGPSSFLPI 356 >gi|254490888|ref|ZP_05104071.1| endonuclease/exonuclease/phosphatase family [Methylophaga thiooxidans DMS010] gi|224464060|gb|EEF80326.1| endonuclease/exonuclease/phosphatase family [Methylophaga thiooxydans DMS010] Length = 228 Score = 44.8 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 34/267 (12%), Positives = 74/267 (27%), Gaps = 52/267 (19%) Query: 4 VTVATWNVNSIRARIH--------NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55 + +A++N++ A I +AA I E D+I LQE Sbjct: 3 LKLASYNIH---ACIGTDGQFDPFRIAAVINELGADVIALQEV----------------- 42 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 E + + L++ + + E+ N R+ Sbjct: 43 --EHHLVNDIDLLDFLAQQTGMIALAG--------PTMLRESRHYGNAILTRLTPESHQL 92 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + + + + + + + Q + Sbjct: 93 LDLSLEDNEPRGVIQLSLNIDDHRLLVYATHLGLKPVERRFQVQKILSLFETKTADTTVL 152 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLY-SFWDYYADSWSKNKGIRIDHIMLSPEATS 234 ++ + F + + + A + + SFW ++A +D + ++P Sbjct: 153 MGDLNEWFLWGRPLRWLKAYFDITPAINSFPSFWPFFA----------LDRVWVTPR--H 200 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261 L + K SDH PV + Sbjct: 201 HLLNVSAHKTALA-KKASDHLPVTADI 226 >gi|222618572|gb|EEE54704.1| hypothetical protein OsJ_02025 [Oryza sativa Japonica Group] Length = 470 Score = 44.8 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 23/135 (17%), Positives = 50/135 (37%), Gaps = 12/135 (8%) Query: 132 KRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ----KLQ 187 R + + L++ I P + + + N+ ++ E + + ++ Sbjct: 309 WRCTFVYGEPKTTDRHLMWELIRRIKPVSNALWLMMGDFNETLWSFEQFSARRRPEKQMM 368 Query: 188 NMGFTDAIRATHDTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLLHSARIDT--K 244 + + HD L W Y +N +R+D + SP ++ A++ Sbjct: 369 DFREVLSHCDLHDIGFLGRPWTYDNGQRGDRNVKVRLDRAVASPSWSNHFSEAKLLHLVS 428 Query: 245 PRGWTKPSDHTPVIV 259 PR SDH P+++ Sbjct: 429 PR-----SDHCPILL 438 >gi|91227580|ref|ZP_01261884.1| putative phospholipase C precursor [Vibrio alginolyticus 12G01] gi|91188473|gb|EAS74766.1| putative phospholipase C precursor [Vibrio alginolyticus 12G01] Length = 442 Score = 44.8 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 37/281 (13%), Positives = 82/281 (29%), Gaps = 39/281 (13%) Query: 4 VTVATWNVNSIRARIHNLAA---WIKEN--NPDIICLQETKTE-DKNFPFETLQSLNYHI 57 + + T+N+ ++ A ++ I ++ D++ LQE + F E + Y Sbjct: 178 LKLMTYNIWALTAIASHIGDRYELIPQHVKGYDVLALQEVFASGREAFLRELAKEYPYQT 237 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 + ++ N + + + I H Sbjct: 238 KMLDKEGVNIHDGGVIIVSRYPIVNEAQYVFPDCSGTDCFADKGVNYAEIIKGGQAYHVF 297 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + +D + R + ++ A +I Y+ N Sbjct: 298 ATHTASFDTDTAREYRQ-------RQFKQIRTLAQSLDIPSSETVVYSGDFNVNK----- 345 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYS--FWDYYADSWS-------KNKGIRIDHIML 228 + A + Y+ +D ++++ +N +D++M+ Sbjct: 346 ----RKFPGDYQQMIANLSAIEPHYSGYTESTFDPRINNFAGEALSGGENVEY-LDYVMV 400 Query: 229 SPEA-TSLLHSARID---TKPRGWTKP---SDHTPVIVSLD 262 S E + R+D T K SDH PV ++ Sbjct: 401 SSEYGVKSFNDNRVDVPRTTAESLWKHYNLSDHFPVSATIK 441 >gi|226371904|gb|ACO51577.1| Retrovirus-related Pol polyprotein LINE-1 [Rana catesbeiana] Length = 156 Score = 44.8 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 22/122 (18%), Positives = 41/122 (33%), Gaps = 4/122 (3%) Query: 3 VVTVATWNVNSIRARIH--NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 ++ + NV + + + + ++ I LQET P L + Y Sbjct: 12 MLRCISLNVKGLNLPEKRSQVLSSLSKHKAHFIFLQETHFRSDAIPK--LSNHIYRSAFH 69 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +S HL +D RFI T + + + N+Y P+ + +T Sbjct: 70 ATNPDAKRKGISILISKHANFHLSDSLIDPAGRFIFLKGTYAAKPITLANIYCPNEHQVT 129 Query: 121 ST 122 Sbjct: 130 FF 131 >gi|111658349|ref|ZP_01409037.1| hypothetical protein SpneT_02000489 [Streptococcus pneumoniae TIGR4] Length = 260 Score = 44.8 bits (104), Expect = 0.012, Method: Composition-based stats. Identities = 28/250 (11%), Positives = 68/250 (27%), Gaps = 9/250 (3%) Query: 21 LAAWIKENNPDIICLQETK-------TEDKNFPFETLQSLNYHIETCGQKSYNGVAILSK 73 L I E + D+IC QE E + + H + + ++ K Sbjct: 12 LLEDILEKDYDLICFQEINQEMTSSEVEVNDLYQALPAAEPIHQDHYVRLLVEKLSEQGK 71 Query: 74 YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKR 133 + G + + I + I + + + ++ P + + K Sbjct: 72 NYYWTWAYNHIGYNRYHEGVAILSKTPIEAREILVSDVDDPTDYHTRRVALAETVVDGKE 131 Query: 134 FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTD 193 + ++ ++ + + +G D Sbjct: 132 LAVASVHLSWWDKGFQEEWARFEAVLKKLNKPLLLAGDFNNPAGQEGYQAILASPLGLQD 191 Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253 A + Y+ + +RID++ + E + + + + SD Sbjct: 192 AFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTTKELA--VENLHVVFDGNKSPQVSD 249 Query: 254 HTPVIVSLDI 263 H + L+ Sbjct: 250 HYGLNAILNW 259 >gi|289829521|ref|ZP_06547123.1| hypothetical protein Salmonellentericaenterica_23358 [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] Length = 28 Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 8/24 (33%), Positives = 16/24 (66%) Query: 4 VTVATWNVNSIRARIHNLAAWIKE 27 + ++N+N +RAR H L A +++ Sbjct: 1 MKFVSFNINGLRARPHQLEAIVEK 24 >gi|218515316|ref|ZP_03512156.1| putative metal-dependent hydrolase protein [Rhizobium etli 8C-3] Length = 65 Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 19/41 (46%), Gaps = 3/41 (7%) Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +R+DHI ++ + + A + R SDH P+ + Sbjct: 25 MRLDHIFVTDDLV--VKRAAVLQN-RLTNVASDHLPLFAEI 62 >gi|86360979|ref|YP_472866.1| putative metal-dependent hydrolase protein [Rhizobium etli CFN 42] gi|86285081|gb|ABC94139.1| putative metal-dependent hydrolase protein [Rhizobium etli CFN 42] Length = 242 Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 20/41 (48%), Gaps = 3/41 (7%) Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +R+DHI ++ + A + + R SDH P++ + Sbjct: 202 MRLDHIFVTEGLV--VQRATVL-QTRLTRVASDHLPLLAEI 239 >gi|116201803|ref|XP_001226713.1| hypothetical protein CHGG_08786 [Chaetomium globosum CBS 148.51] gi|88177304|gb|EAQ84772.1| hypothetical protein CHGG_08786 [Chaetomium globosum CBS 148.51] Length = 1577 Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 42/273 (15%), Positives = 70/273 (25%), Gaps = 47/273 (17%) Query: 9 WNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGV 68 WN L A ++E D++ +QE + Sbjct: 444 WNTEG---NKQALEALLEEAQYDLMAIQE---------------------PWINQQTKST 479 Query: 69 AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKI 128 + + + V +F + T + GN Sbjct: 480 YCPRGSKYHLVHKASGRAAIFVSRKFDTGQWEYETSEEHCKVWFPGLGNSGLELWSIYNP 539 Query: 129 SWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN 188 K L+ R P++ AGD+N+ D + + +A L ++ Sbjct: 540 LEDKTLLQTLLSRPAPAYPVVLAGDFNLHHPHWDRFGRYERKAEALLELALQWDLDLRTP 599 Query: 189 MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGW 248 G + IDH S + + RG Sbjct: 600 AGTITRAPQGAQRGRTST----------------IDHFWASVGL----QTTYYGLEYRGK 639 Query: 249 TKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 SDH P I+ DI P +Q N K + Sbjct: 640 ---SDHYPQILEADIGGPLPQQTQPGGWNWKMM 669 >gi|324114357|gb|EGC08326.1| endonuclease/Exonuclease/phosphatase [Escherichia fergusonii B253] Length = 253 Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 34/267 (12%), Positives = 64/267 (23%), Gaps = 32/267 (11%) Query: 5 TVATWNVN-SI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN--YH 56 V T N++ R + L ++ + DI+CLQE +++ H Sbjct: 11 KVLTINIHKGFTAFNRRFILPELRDAVRTVSADIVCLQEV-MGAHEVHPLHVENWPDTSH 69 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 E ++ A E + +++ R Sbjct: 70 YEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVP 129 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + + R +Q L E + D + D + N Sbjct: 130 PMTGKAIHVMCVHLGLREAHRQAQLAMLAEWVNELPDGEPVLVAGDFNDWRQKANHPLKM 189 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 + +R+D I + + Sbjct: 190 QAGLDEIFTHAHGRPARTFPVQFPL-------------------LRLDRIYV----KNAS 226 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263 SA R W SDH P+ + + Sbjct: 227 ASAPTALPLRTWRHLSDHAPLSAEIHL 253 >gi|242023120|ref|XP_002431984.1| protein angel, putative [Pediculus humanus corporis] gi|212517335|gb|EEB19246.1| protein angel, putative [Pediculus humanus corporis] Length = 354 Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 41/297 (13%), Positives = 85/297 (28%), Gaps = 43/297 (14%) Query: 2 SVVTVATWNV----------NSIRA-------RIHNL--AAWIKENNPDIICLQETKTED 42 S + + WN+ N ++ + I +N+PD+ICL+E + Sbjct: 68 SFLRLLQWNILSQTLGVSNDNFVKTPPESLDWSLKRFYVLQEIIQNDPDVICLEEV--DH 125 Query: 43 KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA--TFT 100 F L+S+ Y + + S +E G + + E T Sbjct: 126 FKFLESALKSIGYSGKFFPKPD-------SPCVYVEGNNGSDGAAMFYKTSKYEVIKWET 178 Query: 101 INTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP 160 + + + + + + + + L+ + L D + Sbjct: 179 RILEVWHVQSNQVGLSSILKDKESGIEFCVAVTHLKAKAGALLATLRDHQGRDLLTWLEK 238 Query: 161 HDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG 220 PII D N + + + Y+ W + Sbjct: 239 ISGGRPIIIGGDFNAEPSEPVYRTMTDNRLDLKSAYSVNGREPPYTTW----KGEICHT- 293 Query: 221 IRIDHIMLSPEATS-LLHSA----RIDTK-PRGWTKPSDHTPVIVSLDIPEPRKKQQ 271 ID++ S L I + + PSDH ++V ++ + + Sbjct: 294 --IDYVFHSKHFIPLRLLDFPTGKTIGPERIPSLSYPSDHFSLVVDFELNNVVAEDE 348 >gi|297161073|gb|ADI10785.1| endonuclease/exonuclease/phosphatase [Streptomyces bingchenggensis BCW-1] Length = 271 Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 44/263 (16%), Positives = 84/263 (31%), Gaps = 24/263 (9%) Query: 5 TVATWNVNSIRA-RIHNLAAWIK-ENNPDIICLQETKTEDK-NFPFETLQSLNYHIE--- 58 + T+N A R A W+ + D++ + E + L Y Sbjct: 24 RLITFNAQHASAERSRRQAEWLAGQEAADLVVMTEVGSGPGGQALVTALAQRGYRSVLAL 83 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 G+ Y V + + + + A I + T+ + LY+P P Sbjct: 84 PSGRPDYRTVLASRSAELEAVDSGIGVLSHRGP----AARVRIGSHTVGLLGLYVPSRGP 139 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 D + + + P+I +GD N++ P + A F Sbjct: 140 KERRNEDKRAFQGAVTDAVPGLLAQFDGPVIVSGDLNVV-------EPGHVPHHAVFGKW 192 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 ++ + G DA R H +S++ G R DH ++ + + Sbjct: 193 EYSFYRSFVDAGLIDAFRHLHPDAAEHSWFG-RGGD-----GYRFDHAFVTARHGEYVRT 246 Query: 239 ARIDTKPRGWTKPSDHTPVIVSL 261 + +PR +DH + + L Sbjct: 247 CQYLHEPREL-GLTDHAAMFLRL 268 >gi|159899198|ref|YP_001545445.1| endonuclease/exonuclease/phosphatase [Herpetosiphon aurantiacus ATCC 23779] gi|159892237|gb|ABX05317.1| Endonuclease/exonuclease/phosphatase [Herpetosiphon aurantiacus ATCC 23779] Length = 304 Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 39/254 (15%), Positives = 73/254 (28%), Gaps = 44/254 (17%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + + +WNV ++ I + PD+I LQE L S ++E Sbjct: 83 LRLLSWNVAGWNLNSVDILRVIDDEQPDLIALQEVDVGLGKPLQTALASKYPYVEFRPAS 142 Query: 64 ---SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +A+ SK+ I R + + I + + Sbjct: 143 GAAQPADLALWSKWPFALIHPCAYWQCYRRAYRVQHPQQPLILVNVHIEHSPIR------ 196 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 ++ + + + EP++ AGD+N + Q D+ Sbjct: 197 -WLRFEREREEAAIGQMIADFGQTTEPVLLAGDFNTVEQQAGYAALNTVWGDS------- 248 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 ++ MGF+ R+ H RID+I + + Sbjct: 249 -WHERGVGMGFSWPQRSWHPPIV------------------RIDYIWHNAAIRPI----- 284 Query: 241 IDTKPRGWTKPSDH 254 + SDH Sbjct: 285 ---QLETGAGVSDH 295 >gi|197265396|ref|ZP_03165470.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197243651|gb|EDY26271.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] Length = 252 Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 28/251 (11%), Positives = 58/251 (23%), Gaps = 27/251 (10%) Query: 15 RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN--YHIETCGQKSYNGVAILS 72 R + L ++ DI+CLQE +++ H E ++ A Sbjct: 27 RFILPELRDAVRTVGADIVCLQEV-MGAHEVHPLHIENWPDTTHYEFLADTMWSDFAYGR 85 Query: 73 KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIK 132 E + ++ R IT + I + Sbjct: 86 NAVYPEGHHGNAVLSRYPIEHYENRDVSVGGSEKRGVLYC-----RITPPMLNRPIHVMC 140 Query: 133 RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192 L + + ++ + + + + + Sbjct: 141 VHLGLRESHRQAQLTMLAGWVNALPESEPVLVAGDFNDWRQKAGPPLNAAGLEEIFTRAH 200 Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPS 252 T +R+D I + S + R W S Sbjct: 201 GRPARTFPVSMPL---------------LRLDRIYVKNANASSPTA----LPLRNWRHLS 241 Query: 253 DHTPVIVSLDI 263 DH P+ + + Sbjct: 242 DHAPLSAEIHL 252 >gi|115918004|ref|XP_001190384.1| PREDICTED: similar to endonuclease/reverse transcriptase [Strongylocentrotus purpuratus] gi|115929974|ref|XP_001194002.1| PREDICTED: similar to endonuclease/reverse transcriptase [Strongylocentrotus purpuratus] Length = 1154 Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 38/262 (14%), Positives = 74/262 (28%), Gaps = 35/262 (13%) Query: 2 SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 + + N S+++ A I++ +PDIIC ET + F E Y+I Sbjct: 71 RTLKLLNVNCRSLKSLKKQRDFQALIEQEDPDIICGTETHLNGEYFTSEVFPQ-TYNIFR 129 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 + + G + + + +I + + GN L G+ Sbjct: 130 KDRNEHGGGVFIGLRKDL---------LGMEMDNLDTDCESIWAKIIFAGNRILYIGSFY 180 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 D +I GD+N + N + + A + Sbjct: 181 RPPNDDPTSLMNLNDALKKLTEKATLPNIILCGDFNAPH--INWENNTVIIDAAQNKPQY 238 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + + D + + + KN +D + + + + Sbjct: 239 GRRLNETLLDMTHDNMLSQMQCD----------ATREKNI---LDLTFTT--IPNQITKS 283 Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261 I SDH V + L Sbjct: 284 EIVP------GMSDHKAVSIHL 299 >gi|291515515|emb|CBK64725.1| Metal-dependent hydrolase [Alistipes shahii WAL 8301] Length = 290 Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 30/274 (10%), Positives = 73/274 (26%), Gaps = 44/274 (16%) Query: 5 TVATWNVNSI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 + T+NV I + +A +KE + D IC+ E Sbjct: 51 RLVTYNV-GIFNKYIKDDYQLIADMMKEIDADAICMNEL--------------------- 88 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 N ++ L G + + + + + Sbjct: 89 -----DNNTNRTRHVYQLKHFASLMGSWDFEYGAAMPYDGGEYGEGVTTRKKAVNKFSVA 143 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + + + + + + + D+ + + Sbjct: 144 LPKGVGAEPRVLV-VMEMEDYVICTSHLDHVSSEAQLGQVELITKTMKERYGDSGKPVFL 202 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM---LSPEATSLL 236 + ++ + + + + + N ID+IM +P+ + Sbjct: 203 GGDMNATPSSETGKLLQKDWEILTI-TGFGTFPSD---NPSKCIDYIMQLKGTPKCE--V 256 Query: 237 HSARIDTKPRGWT--KPSDHTPVIVSLDIPEPRK 268 ++I + K SDH PV++ + +P K Sbjct: 257 VGSQILRWFKSGDVTKASDHLPVMLDIKLPAKNK 290 >gi|265753182|ref|ZP_06088751.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|263236368|gb|EEZ21863.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] Length = 281 Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 39/268 (14%), Positives = 81/268 (30%), Gaps = 27/268 (10%) Query: 7 ATWNV------NSIRA---RIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYH 56 AT+NV +S+ R + +IK+ DI+ +QE + ++ + Sbjct: 28 ATFNVRYDNPQDSLNNWQYRKDRVCQFIKDRELDIVGMQEVLHNQFQDLRAGLPEYDGIG 87 Query: 57 IETCGQKSYNGVA-ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + K+ A + + E++ + + + + Sbjct: 88 VGRDDGKTAGEYAPLFYRKDKYEVLDSNTFWLAENPDSVGMMGWDAVCVRIATWAKFKDK 147 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + + R S L + + G+ DA Sbjct: 148 ATGKIFMAVNTHFDHVGEEARRQSALLIIRKIKEIVGER------PAVVTGDFNVTDASD 201 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDY-YADSWSKNKGIRIDHIMLSPEATS 234 E + + + + A R T Y+F D+ + K ID I ++P+ Sbjct: 202 AYETITTNEFVMKDAYKTAARV---TGVDYTFHDFARIPAEDCEK---IDFIFVTPQVL- 254 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + + I + SDH P + L+ Sbjct: 255 -VRNCEIPAEV-PEALLSDHNPQLADLE 280 >gi|30248098|ref|NP_840168.1| hypothetical protein NE0067 [Nitrosomonas europaea ATCC 19718] gi|30179983|emb|CAD83978.1| conserved hypothetical protein [Nitrosomonas europaea ATCC 19718] Length = 274 Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 33/260 (12%), Positives = 66/260 (25%), Gaps = 27/260 (10%) Query: 2 SVVTVATWNVN-SI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55 + +AT+N++ + R +H L + + D++ LQE + + Sbjct: 27 RTLHIATYNIHKGLSFFNQRLILHELRDQLHGLDVDVVFLQEV-VGEHALHATRFRDWPR 85 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + + + H L + I+ L Sbjct: 86 NTQYEFLADSMWPDFAYGKNAVYGHGHHGNAILSRFSIVNWENEDISAHRFESRGLLHCE 145 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 I R + + + W A Sbjct: 146 LAIPGWKDTLHCICVHLGLFRRGRSQQLEAIEKRIRQLVSPDAPLVVAGDFNDWRGAANP 205 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 L R + ++ A R+ L +R+D I + Sbjct: 206 LLASRLNLVEVFQHTHGKAARSFPSVLPL----------------LRLDRIYIRGF---Q 246 Query: 236 LHSARIDTKPRGWTKPSDHT 255 + +A+I R W++ SDH Sbjct: 247 VKNAQILHN-RPWSRISDHA 265 >gi|291513563|emb|CBK62773.1| Metal-dependent hydrolase [Alistipes shahii WAL 8301] Length = 406 Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 44/266 (16%), Positives = 73/266 (27%), Gaps = 27/266 (10%) Query: 17 RIHNLAAWIKEN--NPDIICLQE--TKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILS 72 R ++ I+++ +PDI+ +QE + + L L + E S G+ Sbjct: 144 RKSHVGDIIRQSGNDPDILGVQECSIAAQKADM-KAMLGDLYDYSENEKPTSSPGLIFWK 202 Query: 73 KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIK 132 K DL +R+ +L + S Sbjct: 203 KGAFELEER--EIVDLLNGKYPNTYEKQRYGHFVRLKHLASGSSILVYSVHLRAGSDVAT 260 Query: 133 RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192 LR + + N + FT Sbjct: 261 ADLRKEMIDNLCPLAARKSAETGCPVIVLGDMNCTPNRLIGGIPSSPQVYKSHGFLDTFT 320 Query: 193 DAIRATHDTHHLYSFWDYYADSWS------KNKGIRIDHIMLSPEATSLLHS---ARIDT 243 + T++ + YS A +N RID+I PE S + + A + Sbjct: 321 QTRQRTNENYATYS--SSAAVVEECRVEVGENGSRRIDYIFTYPE--SRVTTTRYATVLN 376 Query: 244 KPRGWTK-------PSDHTPVIVSLD 262 T PSDH PV L+ Sbjct: 377 FAEDGTANKLRSPLPSDHHPVRAELN 402 >gi|227357889|ref|ZP_03842237.1| conserved hypothetical protein [Proteus mirabilis ATCC 29906] gi|227161999|gb|EEI47017.1| conserved hypothetical protein [Proteus mirabilis ATCC 29906] Length = 306 Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 41/281 (14%), Positives = 84/281 (29%), Gaps = 31/281 (11%) Query: 2 SVVTVATWNVNS---IRARIHNLAAWIKENNPDIICLQET----------KTED------ 42 + + VAT+N++ RA + ++ N D++ LQE K+ D Sbjct: 33 NTLVVATYNIDGKVYGRAAEQ--SRLLENLNVDLVGLQEVNHHNRRFKQLKSYDALEYFN 90 Query: 43 -KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI 101 + F + ++ + +S + I +V+ D + Sbjct: 91 KEYFKHQFFGEMSIFAHGGWGIALLSRYKISNTKNIHLVSDETSVYKDEVNQIFANYDPN 150 Query: 102 NTQTLR-IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP 160 N +++R +LY P G + + + P + Sbjct: 151 NAESVRAFDSLYEPDGPMHNGAVAPKSYIHAVVNKNGMNIDVYVAHPSFESMALRQQQFK 210 Query: 161 HDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG 220 + L + Q + A Y + + + D K Sbjct: 211 TILEDMDNCNGKYKILLADTNADQDTHELDIFRA-NYRLANGGEYGWIETFHDKDPMMKV 269 Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + ID+I++S I + SDH P++ +L Sbjct: 270 LSIDNIIVSKNI-------EISDVKAIQSTLSDHYPLVATL 303 >gi|159185011|ref|NP_354980.2| hypothetical protein Atu2011 [Agrobacterium tumefaciens str. C58] gi|159140285|gb|AAK87765.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58] Length = 319 Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 17/79 (21%), Positives = 34/79 (43%), Gaps = 22/79 (27%) Query: 207 FWDYYADSWSKNKGIRIDHIMLSPEATSL--------LHSA-----------RIDTKPR- 246 + Y++ + ++D++ LSP + + ++ PR Sbjct: 240 WTLYHSRGPQEQHLCQLDYVWLSPRLAETSATHVPEIIRNGQPFRTVFPPGQEVERYPRT 299 Query: 247 GWTKP--SDHTPVIVSLDI 263 GW +P SDH PV+++LD+ Sbjct: 300 GWDRPKASDHCPVVMTLDL 318 >gi|281312468|sp|Q28FQ5|TYDP2_XENTR RecName: Full=Tyrosyl-DNA phosphodiesterase 2; Short=Tyr-DNA phosphodiesterase 2; AltName: Full=5'-tyrosyl-DNA phosphodiesterase; Short=5'-Tyr-DNA phosphodiesterase; AltName: Full=TRAF and TNF receptor-associated protein homolog Length = 373 Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 21/40 (52%), Gaps = 9/40 (22%) Query: 6 VATWNVNSI-------RARIHNLAAWIKENNPDIICLQET 38 TWN++ + RAR + +++ +PD++ LQE Sbjct: 127 FLTWNIDGLDESNVAERAR--GVCSYLALYSPDVVFLQEV 164 >gi|162449652|ref|YP_001612019.1| putative nuclease [Sorangium cellulosum 'So ce 56'] gi|161160234|emb|CAN91539.1| putative nuclease [Sorangium cellulosum 'So ce 56'] Length = 257 Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 38/267 (14%), Positives = 70/267 (26%), Gaps = 23/267 (8%) Query: 7 ATWNV-NSIRARIHNLAAWIKENNPDIICLQE---------TKTEDKNF--PFETLQSLN 54 T+N+ R + A + PD++ LQE + + P ++ Sbjct: 1 MTFNILFGGEDRFEAILAIVAAARPDLLVLQECVGWEDGARLRAVAEAIGAPAGERHAVL 60 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 + N VA++S+ H P ++ + L + +L Sbjct: 61 GNANPRPNGRRNHVAVVSRAPLAGARVHAPEALAHCLVEV---ELSLGGEPLVVLGTHLN 117 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 G+ + + RFA+ L L + P Sbjct: 118 AGSEDRRLTEARWLLSLVPPTRFAAGLWALAGDLNALSRRDPYPADLGARLAAAGIEKYG 177 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 + + ++ R D+++LSP Sbjct: 178 SPPRFDTMDSIEAFGWADALLLRPRTSR----WFTALRGRDGAQVETRTDYVLLSPRLAG 233 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261 L A + SDH VI L Sbjct: 234 RLALADVID----VGAASDHHAVIAEL 256 >gi|62858529|ref|NP_001016944.1| tyrosyl-DNA phosphodiesterase 2 [Xenopus (Silurana) tropicalis] gi|89268280|emb|CAJ81630.1| novel protein similar to ttrap [Xenopus (Silurana) tropicalis] gi|183986439|gb|AAI66146.1| TRAF and TNF receptor associated protein [Xenopus (Silurana) tropicalis] Length = 384 Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 21/40 (52%), Gaps = 9/40 (22%) Query: 6 VATWNVNSI-------RARIHNLAAWIKENNPDIICLQET 38 TWN++ + RAR + +++ +PD++ LQE Sbjct: 138 FLTWNIDGLDESNVAERAR--GVCSYLALYSPDVVFLQEV 175 >gi|269867186|ref|XP_002652514.1| exodeoxyribonuclease III [Enterocytozoon bieneusi H348] gi|220062326|gb|EED41542.1| exodeoxyribonuclease III [Enterocytozoon bieneusi H348] Length = 243 Score = 44.8 bits (104), Expect = 0.013, Method: Composition-based stats. Identities = 24/220 (10%), Positives = 54/220 (24%), Gaps = 17/220 (7%) Query: 3 VVTVATWNVNSIRARIH----NLAAWIKENNPDIICLQETKTED----KNFPFETL---- 50 +V + NVN IR+ W+ DI C QE + + F + Sbjct: 1 MVKIFCLNVNGIRSFEKFHKIPFNNWLLGLGYDIYCFQEIRGNEVSLRYLFTLDDFCTFA 60 Query: 51 ---QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107 H + N + + I+ + + + + + + Sbjct: 61 SFHSRAGRHGVATLVRKDNYCCATEEVRKGRILKTIHSNFVLYNCYMPYCSDESLIEAVM 120 Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPL--IFAGDYNIIPQPHDCYN 165 L + L + E + ++++ Sbjct: 121 ETYDKLTDVLNKEQHPVVILCGDMNATYSMCDNYLYMREYEQLHYVSEWSMSIDHISKVE 180 Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY 205 I + +N +T+ + D +Y Sbjct: 181 NPIQRGKLHTRDFYMKLQMSSENGIYTEKVAPRIDELPVY 220 >gi|258541736|ref|YP_003187169.1| hypothetical protein APA01_06400 [Acetobacter pasteurianus IFO 3283-01] gi|256632814|dbj|BAH98789.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01] gi|256635871|dbj|BAI01840.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-03] gi|256638926|dbj|BAI04888.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-07] gi|256641980|dbj|BAI07935.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-22] gi|256645035|dbj|BAI10983.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-26] gi|256648090|dbj|BAI14031.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-32] gi|256651143|dbj|BAI17077.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654134|dbj|BAI20061.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-12] Length = 321 Score = 44.8 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 34/292 (11%), Positives = 71/292 (24%), Gaps = 41/292 (14%) Query: 3 VVTVATWNVNSI-----------------R--ARIHNLAAWIKENNPDIICLQETKTEDK 43 + ++TWN++ + R A I +LA++ + D++ LQE ++ Sbjct: 49 TLKLSTWNLDWLLDPAHPGYAQAPPDIPHRTSADISSLASYAAHLHGDVVALQEIESPAG 108 Query: 44 NFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 + YH+ A+ + + Sbjct: 109 A--GQLFPFARYHLAISQDHILQHTALAVRADIPFEQNPDVTALDAYATAPTTHHHLRSG 166 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 + + + K + + + L Sbjct: 167 LDITLHQNGQALRILVVHLKAGCPDNLPHASRPACTTLWQQFAALDDWVATRTQHHEAFA 226 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223 + + T + + + I Sbjct: 227 IMGDFNRHLTVHDPLFLTLLRIAPLDLATAGMASPCQGGSYF-----------------I 269 Query: 224 DHIMLSPEA-TSLLHSA--RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQD 272 DHI+L A + ++ I SDH PV +SL +P + Q Sbjct: 270 DHIILGGAARAWKVPNSLRVIPLAEETGQNLSDHCPVSISLRLPSTNQPPQP 321 >gi|224582626|ref|YP_002636424.1| hypothetical protein SPC_0810 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224467153|gb|ACN44983.1| hypothetical protein SPC_0810 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 252 Score = 44.8 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 28/251 (11%), Positives = 58/251 (23%), Gaps = 27/251 (10%) Query: 15 RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN--YHIETCGQKSYNGVAILS 72 R + L ++ DI+CLQE +++ H E ++ A Sbjct: 27 RFILPELRDAVRTVGADIVCLQEV-MGAHEVHPLHIENWPDTTHYEFLADTMWSDFAYGR 85 Query: 73 KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIK 132 E + ++ R IT + I + Sbjct: 86 NAVYPEGHHGNAVLSRYPIEHYENRDVSVGGSEKRGVLYC-----RITPPMLNRPIHVMC 140 Query: 133 RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192 L + + ++ + + + + + Sbjct: 141 VHLGLRESHRQAQLTMLAGWVNALPESEPVLVAGDFNDWRQKAGPPLNAAGLEEIFTRAH 200 Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPS 252 T +R+D I + S + R W S Sbjct: 201 GRPARTFPVSMPL---------------LRLDRIYVKNANASSPTA----LPLRNWRHLS 241 Query: 253 DHTPVIVSLDI 263 DH P+ + + Sbjct: 242 DHAPLSAEIHL 252 >gi|255085004|ref|XP_002504933.1| predicted protein [Micromonas sp. RCC299] gi|226520202|gb|ACO66191.1| predicted protein [Micromonas sp. RCC299] Length = 209 Score = 44.8 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 7/50 (14%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55 + +W R R+ + +K PD++CLQE ED + L Y Sbjct: 26 ILSW-----RRRLRGIVQEVKALRPDVLCLQE--CEDFHGIAAALAGCGY 68 >gi|16764176|ref|NP_459791.1| cytoplasmic protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56414087|ref|YP_151162.1| hypothetical protein SPA1940 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62179380|ref|YP_215797.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161614949|ref|YP_001588914.1| hypothetical protein SPAB_02703 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167550511|ref|ZP_02344268.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167992044|ref|ZP_02573142.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168230699|ref|ZP_02655757.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168236740|ref|ZP_02661798.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168240676|ref|ZP_02665608.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168263689|ref|ZP_02685662.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168466402|ref|ZP_02700264.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168820041|ref|ZP_02832041.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194443379|ref|YP_002040048.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194450151|ref|YP_002044841.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194471467|ref|ZP_03077451.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194734200|ref|YP_002113904.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197251468|ref|YP_002145768.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197363010|ref|YP_002142647.1| hypothetical protein SSPA1809 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198243219|ref|YP_002214776.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200390368|ref|ZP_03216979.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204929865|ref|ZP_03220886.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205352071|ref|YP_002225872.1| hypothetical protein SG0792 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207856250|ref|YP_002242901.1| hypothetical protein SEN0759 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|238913372|ref|ZP_04657209.1| hypothetical protein SentesTe_19906 [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] gi|16419319|gb|AAL19750.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56128344|gb|AAV77850.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|62127013|gb|AAX64716.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|161364313|gb|ABX68081.1| hypothetical protein SPAB_02703 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194402042|gb|ACF62264.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194408455|gb|ACF68674.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194457831|gb|EDX46670.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194709702|gb|ACF88923.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195630975|gb|EDX49561.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197094487|emb|CAR60004.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197215171|gb|ACH52568.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197290109|gb|EDY29466.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197937735|gb|ACH75068.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199602813|gb|EDZ01359.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204320859|gb|EDZ06060.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205271852|emb|CAR36687.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205324628|gb|EDZ12467.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205329612|gb|EDZ16376.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205334664|gb|EDZ21428.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205339836|gb|EDZ26600.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205343080|gb|EDZ29844.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205347702|gb|EDZ34333.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206708053|emb|CAR32344.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|261246071|emb|CBG23873.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267992555|gb|ACY87440.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301157398|emb|CBW16887.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312911837|dbj|BAJ35811.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320085086|emb|CBY94873.1| Uncharacterized protein ybhP [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321226386|gb|EFX51437.1| Endonuclease/Exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322616289|gb|EFY13198.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322619539|gb|EFY16414.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622765|gb|EFY19610.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322628677|gb|EFY25464.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631615|gb|EFY28371.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322637141|gb|EFY33844.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322641659|gb|EFY38295.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322644546|gb|EFY41086.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322648478|gb|EFY44930.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322654215|gb|EFY50538.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322658130|gb|EFY54397.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322663604|gb|EFY59806.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322670340|gb|EFY66480.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322671576|gb|EFY67698.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676932|gb|EFY72999.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322682857|gb|EFY78876.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686536|gb|EFY82518.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|322713851|gb|EFZ05422.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323129120|gb|ADX16550.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|323194567|gb|EFZ79760.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323199102|gb|EFZ84198.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323202057|gb|EFZ87116.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323208917|gb|EFZ93854.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323215246|gb|EFZ99991.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323220835|gb|EGA05273.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323227306|gb|EGA11474.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229924|gb|EGA14047.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323233149|gb|EGA17245.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240884|gb|EGA24926.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323243201|gb|EGA27221.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248740|gb|EGA32668.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323251744|gb|EGA35611.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323258764|gb|EGA42421.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323260691|gb|EGA44296.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323267872|gb|EGA51351.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323268742|gb|EGA52202.1| endonuclease/exonuclease/phosphatase family protein [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] gi|326622531|gb|EGE28876.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|326627113|gb|EGE33456.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 252 Score = 44.8 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 28/251 (11%), Positives = 58/251 (23%), Gaps = 27/251 (10%) Query: 15 RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN--YHIETCGQKSYNGVAILS 72 R + L ++ DI+CLQE +++ H E ++ A Sbjct: 27 RFILPELRDAVRTVGADIVCLQEV-MGAHEVHPLHIENWPDTTHYEFLADTMWSDFAYGR 85 Query: 73 KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIK 132 E + ++ R IT + I + Sbjct: 86 NAVYPEGHHGNAVLSRYPIEHYENRDVSVGGSEKRGVLYC-----RITPPMLNRPIHVMC 140 Query: 133 RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192 L + + ++ + + + + + Sbjct: 141 VHLGLRESHRQAQLTMLAGWVNALPESEPVLVAGDFNDWRQKAGPPLNAAGLEEIFTRAH 200 Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPS 252 T +R+D I + S + R W S Sbjct: 201 GRPARTFPVSMPL---------------LRLDRIYVKNANASSPTA----LPLRNWRHLS 241 Query: 253 DHTPVIVSLDI 263 DH P+ + + Sbjct: 242 DHAPLSAEIHL 252 >gi|27366781|ref|NP_762308.1| metal-dependent hydrolase [Vibrio vulnificus CMCP6] gi|27358348|gb|AAO07298.1|AE016809_60 Metal-dependent hydrolase [Vibrio vulnificus CMCP6] Length = 297 Score = 44.8 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 45/292 (15%), Positives = 85/292 (29%), Gaps = 53/292 (18%) Query: 4 VTVATWNVNSIR----ARIH----------NLAAWIKENNPDIICLQET-------KT-- 40 +T +WN+ + AR+ LA + ++ N D++ QE K Sbjct: 28 MTFTSWNMEWLSSTPSARVKESHRNEEDFAKLAMYFQKTNSDVLAFQEVNDLAAIKKVVG 87 Query: 41 EDKNFPFETLQSLNYH-IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF 99 + F + Y + Y G AI ++ Sbjct: 88 TNYQILFSDRSNPRYQRFQFDDINQYTGFAIKKGIPFRDVGDIQLNKGNSKLRFASYVII 147 Query: 100 TINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRL-ELEEPLIFAGDYNIIP 158 + L + N++L G K + R LR SQ L + ++ Sbjct: 148 GNTSNELHVLNVHLKAG-----CSGAYKGNDACRTLRLESQALGQWISQRQSNKQTYLVL 202 Query: 159 QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN 218 + + + ++ +R+ + ++SF Sbjct: 203 GDFNHNLAYRNDWLMNELTSAGKIHLLTEDTKANCKVRSKKQPNKVHSFRSL-------- 254 Query: 219 KGIRIDHIMLSPEA------TSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 IDHI++S L S + + SDH PV ++ +P Sbjct: 255 ----IDHIIVSEGLSASQAEQKLFTSNDVLKY-----QLSDHCPVSTTVTLP 297 >gi|37676556|ref|NP_936952.1| hypothetical protein VVA0896 [Vibrio vulnificus YJ016] gi|37201098|dbj|BAC96922.1| hypothetical protein [Vibrio vulnificus YJ016] Length = 297 Score = 44.8 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 45/292 (15%), Positives = 85/292 (29%), Gaps = 53/292 (18%) Query: 4 VTVATWNVNSIR----ARIH----------NLAAWIKENNPDIICLQET-------KT-- 40 +T +WN+ + AR+ LA + ++ N D++ QE K Sbjct: 28 MTFTSWNMEWLSSTPSARVKESHRNEEDFAKLAMYFQKTNSDVLAFQEVNDLAAIKKVVG 87 Query: 41 EDKNFPFETLQSLNYH-IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF 99 + F + Y + Y G AI ++ Sbjct: 88 TNYQILFSDRSNPRYQRFQFDDINQYTGFAIKKGIPFRDVGDIQLNKGNSKLRFASYVII 147 Query: 100 TINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRL-ELEEPLIFAGDYNIIP 158 + L + N++L G K + R LR SQ L + ++ Sbjct: 148 GNTSNELHVLNVHLKAG-----CSGAYKGNDACRTLRLESQALGQWISQRQSNKQTYLVL 202 Query: 159 QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN 218 + + + ++ +R+ + ++SF Sbjct: 203 GDFNHNLAYRNDWLMNELTSAGKIHLLTEDTKANCKVRSKKQPNKVHSFRSL-------- 254 Query: 219 KGIRIDHIMLSPEA------TSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 IDHI++S L S + + SDH PV ++ +P Sbjct: 255 ----IDHIIVSEGLSASQAEQKLFTSNDVLKY-----QLSDHCPVSTTVTLP 297 >gi|167619814|ref|ZP_02388445.1| endonuclease/exonuclease/phosphatase family superfamily protein [Burkholderia thailandensis Bt4] Length = 123 Score = 44.8 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 17/38 (44%), Gaps = 4/38 (10%) Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 D ++ + ID G T+ SDH P+++ L Sbjct: 87 DFAFVTDTLAHRISRCEID----GATRASDHQPIVLEL 120 >gi|206975161|ref|ZP_03236075.1| putative secreted protein [Bacillus cereus H3081.97] gi|206746582|gb|EDZ57975.1| putative secreted protein [Bacillus cereus H3081.97] Length = 264 Score = 44.8 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 40/279 (14%), Positives = 78/279 (27%), Gaps = 35/279 (12%) Query: 2 SVVTVATWNV---NSIRA-RIHNLAAWIKENNPDIICLQETKT-----EDKNFPFETLQS 52 +++ +AT+N+ +S+ R+ + I+ +P I+ LQE ++ KN Sbjct: 6 NLLRIATFNIWNHDSLWLERLEAICEEIRTISPHILALQEVRSCVNLNSKKNVAQYIAGQ 65 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 + Y + + L+ I I ++ + E+ + T Sbjct: 66 IGYPFGIFKEYPDSPDEGLAFLSKIPI----IAEEAIWETDIEESNYCAIRITFTYKGCK 121 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 N + K + + + L+ + Y D Sbjct: 122 FGVTNVHLNWKSSRIRQEQMNTVNNWIENRASDYELLCGDFNDDPFSMVHQYLIRKHWID 181 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 E+ ++ + + D R D IM+ A Sbjct: 182 VAQFKEIEENMIAQPTLDYRKNPNLKDDVKQE----------------KRYDWIMIQENA 225 Query: 233 T---SLLHSARIDTKP---RGWTKPSDHTPVIVSLDIPE 265 + + I PSDH V V L E Sbjct: 226 AFEFPTIENVSIFGDSALNSTGMFPSDHYGVFVDLKFNE 264 >gi|153207659|ref|ZP_01946323.1| endonuclease/exonuclease/phosphatase family protein [Coxiella burnetii 'MSU Goat Q177'] gi|212218503|ref|YP_002305290.1| endonuclease/Exonuclease/phosphatase family protein [Coxiella burnetii CbuK_Q154] gi|120576478|gb|EAX33102.1| endonuclease/exonuclease/phosphatase family protein [Coxiella burnetii 'MSU Goat Q177'] gi|212012765|gb|ACJ20145.1| endonuclease/Exonuclease/phosphatase family protein [Coxiella burnetii CbuK_Q154] Length = 255 Score = 44.8 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 38/270 (14%), Positives = 67/270 (24%), Gaps = 38/270 (14%) Query: 5 TVATWNVN-SIRARIHNLA-----AWIKENNPDIICLQET-----KTEDKNFPFETLQSL 53 TV ++N++ AR ++ + DI+ LQE K+ K F L Sbjct: 12 TVLSYNIHKGFSARYRRFVLPDIREALRAIDADIVLLQEVQGKHRKSRLKKFAHADL--- 68 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 SK+ + + + + + +L Sbjct: 69 ----------PQTEFIAESKWPHYMYGKNAVYGSAHHGNALLSNFPFKMVENINV-SLSQ 117 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 I D + + + E I + P+I D Sbjct: 118 RASRSILHAIIDYEPTVELHVICIHLGLFRAERDYQLITLIKRIEAHVPSHAPLIIAGDF 177 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 ++ + + Y S + RI + Sbjct: 178 NDWRRGAFNYMEKELELKEVYKVLEGKHAKTY------PASRPTLEVDRIYY----RGL- 226 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 L S I + W K SDH P+ I Sbjct: 227 -KLLSGEIFNESY-WKKLSDHLPLHAKFAI 254 >gi|46108350|ref|XP_381233.1| hypothetical protein FG01057.1 [Gibberella zeae PH-1] Length = 476 Score = 44.8 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 49/296 (16%), Positives = 80/296 (27%), Gaps = 44/296 (14%) Query: 2 SVVTVATWNVNSIR-------ARIHNLAAWIKEN--NPDIICLQETKTED--KNFPFETL 50 S + + T N +R AR+ + I P I+ LQE T++ + T Sbjct: 29 SNINLLTLNCWGLRYISTQRNARLDEIGRRIAHAVPTPQIVALQECFTQEDYEAIRHHTR 88 Query: 51 QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 Q L Y G+AILS + EI L A + Sbjct: 89 QILPYGKFYHSGAFGGGLAILSHWPIEEIAQSWEMSKLLRGAAERGHLVVGMGD-FNMFP 147 Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170 L + H + D + E+ P P +N + Sbjct: 148 LSIYHRVITGNAPVRDVWRILHPDSSLGPAYHPSEKDRH-------RPLPTADFNLLENG 200 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230 + + + QN I +G R+D+I S Sbjct: 201 VTSNSVYNTWRWNKNQQNRLTKGEICEVPPDTI-------------DPRGQRLDYIFAST 247 Query: 231 EATS---------LLHSARI---DTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDST 274 ++ +A + + P SDH V +L P + Sbjct: 248 GVDPDAPAKTPGWVVKTAHVSMTERHPDLLCSLSDHFAVQATLTRHTPSPAPIPAD 303 >gi|237654298|ref|YP_002890612.1| endonuclease/exonuclease/phosphatase [Thauera sp. MZ1T] gi|237625545|gb|ACR02235.1| Endonuclease/exonuclease/phosphatase [Thauera sp. MZ1T] Length = 249 Score = 44.8 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 42/281 (14%), Positives = 87/281 (30%), Gaps = 59/281 (20%) Query: 4 VTVATWNVN-SI-----RARIHNLAAWIKENNPDIICLQETKT----------------E 41 + + ++N++ R +H L ++ + D++ LQE + + Sbjct: 3 LRICSYNIHKGFSQFNRRMVVHELRDRLRSLDADLVFLQEVQGLHLGHPARHPDWPALPQ 62 Query: 42 DKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI 101 + + Q + Y ++G AILS++ + D + + + Sbjct: 63 HEFLAEDAWQQIAYGGNAIYDHGHHGNAILSRHLILSTANQDVSDHRFERRGLLHCEVQL 122 Query: 102 NTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161 + + + + G S + ++ + PLI AGD+N Sbjct: 123 PEFDVPVHCVCVHLGLMAGS-----RRRQMEALAERMEELAPGNAPLIIAGDFND----- 172 Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI 221 W N A L R + G R+ T + Sbjct: 173 -------WRNRADDLLGRRLGLAEAFGSGRGRPARSYPSTLPFF---------------- 209 Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 R+D I + + A++ W + SDH + L+ Sbjct: 210 RLDRIYVRGF---RVRQAQVHYGA-PWARISDHAALTADLE 246 >gi|169827405|ref|YP_001697563.1| endonuclease yhcR [Lysinibacillus sphaericus C3-41] gi|168991893|gb|ACA39433.1| Endonuclease yhcR precursor [Lysinibacillus sphaericus C3-41] Length = 1379 Score = 44.8 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 13/73 (17%), Positives = 30/73 (41%), Gaps = 10/73 (13%) Query: 200 DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT---KPSDHTP 256 ++++ + N + +DHI++S + I + SDH P Sbjct: 1199 PEQDRFTYF------FQGNNQV-LDHILVSNHLADVTEIDLIHMNANFTEAQGRASDHDP 1251 Query: 257 VIVSLDIPEPRKK 269 V+V +D+ +++ Sbjct: 1252 VLVQIDLQAGKEE 1264 >gi|322374633|ref|ZP_08049147.1| RgfB protein [Streptococcus sp. C300] gi|321280133|gb|EFX57172.1| RgfB protein [Streptococcus sp. C300] Length = 271 Score = 44.8 bits (104), Expect = 0.014, Method: Composition-based stats. Identities = 33/267 (12%), Positives = 80/267 (29%), Gaps = 20/267 (7%) Query: 4 VTVATWNVNSI--RARIHNLAAWIKEN---NPDIICLQETKTEDKNFPFETLQSLNY--- 55 + T N +S + +++ + D+IC QE + E + +Y Sbjct: 1 MKFLTLNTHSWMEKEAEEKFQILLQDILDKDYDLICFQEI--NQEMTSPEVEVNNHYQAL 58 Query: 56 ------HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 H + + +A K + G D + I + I + + + Sbjct: 59 PSAEPIHQDHYVRLLVEKLAEKGKNYYWTWAYNHVGYDRYHEGVAILSKTPIKAREILVS 118 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG-DYNIIPQPHDCYNPII 168 ++ P + K + ++ + + + + + Sbjct: 119 DVDDPTDYHTRRVALAETEVEGKELALASVHLSWWDKGFQEEWARFEAVLKELNKPLILA 178 Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 + + E Q+ +G DA + Y+ + +RID++ Sbjct: 179 GDFNNPAGQEGYQAILASP-LGLQDAFEVAKERSGSYTVPPEIDGWKGNTEPLRIDYVFT 237 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHT 255 + E + S ++ + + SDH Sbjct: 238 TKELE--VESLQVVFDGQNSPQVSDHY 262 >gi|228476525|ref|ZP_04061215.1| metal-dependent hydrolase [Streptococcus salivarius SK126] gi|228251946|gb|EEK10992.1| metal-dependent hydrolase [Streptococcus salivarius SK126] Length = 303 Score = 44.8 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 29/278 (10%), Positives = 68/278 (24%), Gaps = 26/278 (9%) Query: 2 SVVTVATWNVNSIRARIH----NLAAWIKEN----NPDIICLQETKTEDKNFPFETLQ-S 52 ++ T N +S + +KE DIIC QE ++ + Sbjct: 31 KLMKFLTLNTHS---WMEEDAEGKFQTLKEQILKAQYDIICFQEV---NQEIETSVVDTD 84 Query: 53 LNYHIETCGQKSYNGVAIL---------SKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 YH + + + G D + + + + Sbjct: 85 AYYHALPSATPIHQDHFVRLLVEKLAEEGLQYHWTWAYNHIGYDHLNEGVAVLSRQPLTA 144 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 + + ++ P + + + ++ Sbjct: 145 SEILVSDVDDPTDYHTRRVAVAETTVDGREVAVASVHLSWWDKGFQEEWARIEERFKAIG 204 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223 I+ + ++ D+ +T Y+ + +RI Sbjct: 205 KPLILAGDFNNPAGREGHQAILASSLNLQDSFEVAKETTGSYTVGPGIDGWKGNEEPLRI 264 Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 D++ S + T + + SDH + L Sbjct: 265 DYVFASQDWT--VERLSVIFDGNNQPLVSDHYGLEAEL 300 >gi|218699162|ref|YP_002406791.1| putative metal-dependent hydrolase [Escherichia coli IAI39] gi|218369148|emb|CAR16903.1| putative metal-dependent hydrolase [Escherichia coli IAI39] Length = 253 Score = 44.8 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 34/267 (12%), Positives = 64/267 (23%), Gaps = 32/267 (11%) Query: 5 TVATWNVN-SI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN--YH 56 V T N++ R + L ++ + DI+CLQE +++ H Sbjct: 11 KVLTINIHKGFTAFNRRFILPELRDAVRTVSADIVCLQEV-MGAHEVHPLHVENWPDTSH 69 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 E ++ A E + +++ R Sbjct: 70 YEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIENYENRDVSVDGAEKRGVLYCRIVP 129 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + + R +Q L E + D + D + N Sbjct: 130 PMTGKAIHVMCVHLGLREAHRQAQLAMLAEWVNELPDGEPVLVAGDFNDWRQKANHPLKV 189 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 + +R+D I + + Sbjct: 190 QAGLDEIFTRAHGRPARTFPVQFPL-------------------LRLDRIYV----KNAS 226 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263 SA R W SDH P+ + + Sbjct: 227 TSAPTALPLRTWRHLSDHAPLSAEIHL 253 >gi|147787189|emb|CAN66833.1| hypothetical protein VITISV_030891 [Vitis vinifera] Length = 1767 Score = 44.8 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 30/234 (12%), Positives = 59/234 (25%), Gaps = 29/234 (12%) Query: 27 ENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGD 86 N D+ CLQETK + + GV L Sbjct: 705 SINYDV-CLQETKMTEMSL---------------------GVVRSLGVGRFLEWGALDAR 742 Query: 87 DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEE 146 + L +G + + S + + EE Sbjct: 743 GAAGGVVVFWDNRVLELMGLEVGLFSISCRFKNVEDGFRWTFSGVYGPTLKRYREAFWEE 802 Query: 147 PLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYS 206 G + +N + N+ V S ++ + +R ++ Sbjct: 803 LGAIRGLWTDPWCIEGDFNMTRFSNERRRGGRVSSSMRRFSEVIDELELRDLPLQGGPFT 862 Query: 207 FWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 + + + RID ++S + + SDH P+++ Sbjct: 863 W----SGGLNNQTMSRIDRFLVSEDWEGYFKGVV---QSTLSRPVSDHFPILLD 909 >gi|331266731|ref|YP_004326361.1| metal-dependent hydrolase superfamily protein [Streptococcus oralis Uo5] gi|326683403|emb|CBZ01021.1| metal-dependent hydrolase superfamily protein [Streptococcus oralis Uo5] Length = 271 Score = 44.8 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 33/267 (12%), Positives = 80/267 (29%), Gaps = 20/267 (7%) Query: 4 VTVATWNVNSI--RARIHNLAAWIKEN---NPDIICLQETKTEDKNFPFETLQSLNY--- 55 + T N +S + +++ + D+IC QE + E + +Y Sbjct: 1 MKFLTLNTHSWMEKEAEEKFQILLRDILDKDYDLICFQEI--NQEMTSPEVEVNNHYQAL 58 Query: 56 ------HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 H + + +A K + G D + I + I + + + Sbjct: 59 PSAEPIHQDHYVRLLVEKLAEKGKNYYWTWAYNHIGYDRYHEGVAILSKTPIKAREILVS 118 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG-DYNIIPQPHDCYNPII 168 ++ P + K + ++ + + + + + Sbjct: 119 DVDDPTDYHTRRVALAETEVEGKELALASVHLSWWDKGFQEEWARFEAVLKELNKPLILA 178 Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 + + E Q+ +G DA + Y+ + +RID++ Sbjct: 179 GDFNNPAGQEGYQAILASP-LGLQDAFEVAKERSGSYTVPPEIDGWKGNTEPLRIDYVFT 237 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHT 255 + E + S ++ + + SDH Sbjct: 238 TKELE--VESLQVVFDGQNSPQVSDHY 262 >gi|323967391|gb|EGB62812.1| endonuclease/Exonuclease/phosphatase [Escherichia coli M863] gi|327253576|gb|EGE65205.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia coli STEC_7v] Length = 253 Score = 44.8 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 34/267 (12%), Positives = 64/267 (23%), Gaps = 32/267 (11%) Query: 5 TVATWNVN-SI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN--YH 56 V T N++ R + L ++ + DI+CLQE +++ H Sbjct: 11 KVLTINIHKGFTAFNRRFILPELRDAVRTVSADIVCLQEV-MGAHEVHPLHVENWPDTSH 69 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 E ++ A E + +++ R Sbjct: 70 YEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVP 129 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + + R +Q L E + D + D + N Sbjct: 130 PMTGKAIHVMCVHLGLREAHRQAQLAMLAEWVNELPDGEPVLVAGDFNDWRQKANHPLKM 189 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 + +R+D I + + Sbjct: 190 QAGLDEIFTRAHGRPARTFPVQFPL-------------------LRLDRIYV----KNAS 226 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263 SA R W SDH P+ + + Sbjct: 227 ASAPTALPLRTWRHLSDHAPLSAEIHL 253 >gi|82702653|ref|YP_412219.1| endonuclease/exonuclease/phosphatase [Nitrosospira multiformis ATCC 25196] gi|82410718|gb|ABB74827.1| Endonuclease/exonuclease/phosphatase [Nitrosospira multiformis ATCC 25196] Length = 228 Score = 44.8 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 44/265 (16%) Query: 4 VTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 +T+AT+N++ R + + ++E N DII LQE E Q Y + Sbjct: 3 MTLATYNIHGCIGADGRFKPDRIIDVLQEMNADIIALQEV---------EHHQVEGYDLL 53 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 AI + +N L + Sbjct: 54 DYFAVKTGFTAIAGPTLVRRTHHY------GNALLTKLPVLAVNRIDLTLPGREPRGALD 107 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 +T D ++ + L + + + D Sbjct: 108 VTLAWNDRRVHVVATHLGLRPSERRQQVRHLL------KLFEIRLTEIYVLMGDLNEWFL 161 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 + + L AT + + +D + + P L S Sbjct: 162 WGRPLRWLHAHFKRPPHCATFPARKPF---------------MALDRLWVHPR--RRLKS 204 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263 + SDH P+ ++I Sbjct: 205 LEAHSSSLARI-ASDHLPLKAIIEI 228 >gi|120553053|ref|YP_957404.1| endonuclease/exonuclease/phosphatase [Marinobacter aquaeolei VT8] gi|120322902|gb|ABM17217.1| Endonuclease/exonuclease/phosphatase [Marinobacter aquaeolei VT8] Length = 586 Score = 44.8 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 29/87 (33%), Gaps = 22/87 (25%) Query: 192 TDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID----TKPR- 246 Y++ Y KG +D+ + SP + A+I +PR Sbjct: 503 HQYYPCLPMQCEHYTY-RYQGQ-----KGT-LDYALASPALMPWIEQAQIWNINADEPRA 555 Query: 247 ----------GWTKPSDHTPVIVSLDI 263 G + SDH PV+ L + Sbjct: 556 LSYRQTPDQSGPWRSSDHNPVLTDLKL 582 >gi|116194258|ref|XP_001222941.1| hypothetical protein CHGG_03727 [Chaetomium globosum CBS 148.51] gi|88179640|gb|EAQ87108.1| hypothetical protein CHGG_03727 [Chaetomium globosum CBS 148.51] Length = 1425 Score = 44.8 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 18/55 (32%), Gaps = 4/55 (7%) Query: 219 KGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDS 273 G ID ++ S E + + G SDH + DI P D Sbjct: 508 YGSTIDLVLASEELAEAVIRCGVHRTEHG----SDHRAIETVFDIEVPVPTHHDR 558 >gi|156363320|ref|XP_001625993.1| predicted protein [Nematostella vectensis] gi|156212852|gb|EDO33893.1| predicted protein [Nematostella vectensis] Length = 251 Score = 44.8 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 31/236 (13%), Positives = 69/236 (29%), Gaps = 16/236 (6%) Query: 27 ENNPDIICLQETKTE-DKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPG 85 + + DI+ + ET +++ Y ++SK ++ P Sbjct: 24 KRDIDIMGISETHWTGQGKMQLRDGETMVYSGREDNIHREGVGILMSKNAAACLIEWTPW 83 Query: 86 DDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELE 145 ++ +QARF + + D+ + ++ L +Q + Sbjct: 84 NERMIQARFYSRHIQLTIIHIY------APTEDADEHLKDEFYTRLQEVLDSRNQHDMVI 137 Query: 146 EPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY 205 ++ E L + T + H Sbjct: 138 ITGDMNAKVGGQNWDYERVMGKHGLGVRNDNGERLCELCDLNELVITGTLFPHRTIHKA- 196 Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 ++ D +KN+ IDH++++ + + R+ R SDH V + Sbjct: 197 TWIS--PDGKTKNQ---IDHVLVNKRFRNSVKDTRVF---RSADVGSDHYLVCATY 244 >gi|117618538|ref|YP_855175.1| endonuclease/exonuclease/phosphatase family protein [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117559945|gb|ABK36893.1| endonuclease/exonuclease/phosphatase family [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 371 Score = 44.8 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 42/278 (15%), Positives = 81/278 (29%), Gaps = 43/278 (15%) Query: 4 VTVATWNV-------NSIRARIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNY 55 + VA++NV SI R+ L ++K + + LQE + F + Y Sbjct: 107 LKVASYNVWALPVIAASIGERLALLPEYLKGYDA--LLLQEVFDGRREGFLQALAKEYPY 164 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + N + ++ + Q + + T T + + Sbjct: 165 QTRVLDKPGVN------IHDGGVVIVSRYPIVREAQLVYPQCTGTDCFADKGVMYAEVIK 218 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 G + + ++++ + A I Y N F Sbjct: 219 GG-KAWHLFATHTASFDTDEARRLRQIQFGQIRTLAASLKIPASDTVIYGGDFNVNKRKF 277 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYS--FWDYYADSWS-------KNKGIRIDHI 226 + G + A + Y+ +D + ++ N +D++ Sbjct: 278 ADDY---------AGMLANLNADEPGYGGYTEATFDPRINPYAGGPLSGGANVEY-LDYL 327 Query: 227 MLSPE---ATSLLHSARIDTKPRGWTKP----SDHTPV 257 + S E L+S I G P SDH PV Sbjct: 328 VASREYGAVCHNLNSVWIPRSSDGSLWPASNLSDHFPV 365 >gi|323351045|ref|ZP_08086702.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis VMC66] gi|322122769|gb|EFX94478.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis VMC66] Length = 749 Score = 44.8 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 28/72 (38%), Gaps = 10/72 (13%) Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT---K 250 + HD YS++ Y + S +D+I +S A + + Sbjct: 600 NLMQEHDVADRYSYF-YRGSNQS------LDNIFISKNLAGKTVFAPVHINASFMEEHGR 652 Query: 251 PSDHTPVIVSLD 262 SDH PV+V LD Sbjct: 653 ASDHDPVVVQLD 664 >gi|315299279|gb|EFU58531.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 16-3] Length = 253 Score = 44.8 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 34/267 (12%), Positives = 64/267 (23%), Gaps = 32/267 (11%) Query: 5 TVATWNVN-SI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN--YH 56 V T N++ R + L ++ + DI+CLQE +++ H Sbjct: 11 KVLTINIHKGFTAFNRRFILPELRDAVRTVSADIVCLQEV-MGAHEVHLLHVENWPDTSH 69 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 E ++ A E + +++ R Sbjct: 70 YEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVP 129 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + + R +Q L E + D + D + N Sbjct: 130 PMTGKAIHVMCVHLGLREAHRQAQLAMLAEWVNELPDGEPVLVAGDFNDWRQKANHPLKV 189 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 + +R+D I + + Sbjct: 190 QAGLDEIFTRAHGRPARTFPVQFPL-------------------LRLDRIYV----KNAS 226 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263 SA R W SDH P+ + + Sbjct: 227 ASAPTALPLRTWRHLSDHAPLSAEIHL 253 >gi|293371500|ref|ZP_06617920.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CMC 3f] gi|292633537|gb|EFF52100.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CMC 3f] Length = 297 Score = 44.8 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 32/267 (11%), Positives = 70/267 (26%), Gaps = 25/267 (9%) Query: 2 SVVTVATWNVN-----SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56 + + VAT+N+ R +A IK+ + +I +E + + Q + + Sbjct: 51 TSMRVATYNLQVETGTGWTNRRERVAQLIKDYDFEICGFEE--ASWEQRSYLGTQLASDY 108 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 + + + LD + T I + N Sbjct: 109 QILAYGRDTGNDDNKAGEMSGILYKKSRYTLLDAGRFWFSETPEIPSNGWDETNFKRFCV 168 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 K ++ + + + + + N Sbjct: 169 WGKFKDSKTQKEFYLFETHMPLADNARKHACQMLVDAVSDKAKDNTPAFCTGDFNATPDA 228 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 E+ + A L++F RID I + Sbjct: 229 PEIAT-TICQSGILKDAYREAAVQHGALFTFPSKKT---------RIDFIFV-------- 270 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263 A + + + SDH P+++ ++I Sbjct: 271 KHATVLSTRTIVSSLSDHYPMVIVVEI 297 >gi|218676474|ref|YP_002395293.1| Endonuclease/Exonuclease/phosphatase family [Vibrio splendidus LGP32] gi|218324742|emb|CAV26393.1| Endonuclease/Exonuclease/phosphatase family [Vibrio splendidus LGP32] Length = 291 Score = 44.8 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 38/276 (13%), Positives = 74/276 (26%), Gaps = 24/276 (8%) Query: 4 VTVATWN---------VNSI---R--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFET 49 +T+++WN VN R A L + + N D++ QE D + Sbjct: 23 LTISSWNIEWLSTNEAVNKFSDQRDQADFDKLEQYFQSLNSDVLAFQEV---DDINAIQR 79 Query: 50 LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 + Y I ++ + + + + + + LR Sbjct: 80 IAGDQYKIL-MSDRALPENSNHQFKEVNQYTGFAVRKGIILTDYADFPLESGANSKLRFA 138 Query: 110 NLYLPHGNPITSTKYDDKISWIK--RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167 + + + + + ++ + Y + Sbjct: 139 SYMVVETDTKPIHMLSVHLKAGCSGAYKSNRDCSRLKDQAQQLNKWIQQRERQGQDYAIL 198 Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227 N QN A R T + S + + IDHI+ Sbjct: 199 GDFNHNLSYSRDWMWKDLTQNADAQLATRKTRADCKVRS---NRNNHRTHQFRSVIDHIV 255 Query: 228 LSPEA-TSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 +S S +T+ K SDH PV ++ Sbjct: 256 VSKSLDASPAKQKVFETQDVLDYKLSDHCPVSTTIK 291 >gi|73999461|ref|XP_852673.1| PREDICTED: similar to LINE-1 reverse transcriptase homolog [Canis familiaris] Length = 1344 Score = 44.8 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 38/110 (34%), Gaps = 12/110 (10%) Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 + E R L M FTD R H Y+F+ ++S IDHI+ Sbjct: 227 KHNISKETRALNDTLDQMDFTDIYRTLHPNSTEYTFFSSAHGTFST-----IDHILGHKS 281 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 + I SDH + + L+ +K + S ++ I Sbjct: 282 GLNRYQKIGIVPCI-----FSDHNALKLELN--HNKKFGRTSNMWRLRTI 324 >gi|307706951|ref|ZP_07643750.1| endonuclease/Exonuclease/phosphatase family protein [Streptococcus mitis SK321] gi|307617665|gb|EFN96833.1| endonuclease/Exonuclease/phosphatase family protein [Streptococcus mitis SK321] Length = 271 Score = 44.8 bits (104), Expect = 0.015, Method: Composition-based stats. Identities = 31/273 (11%), Positives = 80/273 (29%), Gaps = 16/273 (5%) Query: 4 VTVATWNVNSI--RARIHNLAAWIKEN---NPDIICLQETK-------TEDKNFPFETLQ 51 + T N +S + +++ + D+IC QE E + Sbjct: 1 MKFLTLNTHSWMEKEAEEKFQLLLEDILDKDYDLICFQEINQEITSPEVEVNDLYQALPA 60 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 + H + + ++ K + G D + I + I + + + ++ Sbjct: 61 AEPIHQDHYVRLLVEKLSEQGKDYYWTWAYNHIGYDRYHEGVAILSKTPIEAREILVSDV 120 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG-DYNIIPQPHDCYNPIIWE 170 P + + K + ++ + + + + + + Sbjct: 121 DDPTDYHTRRVAVAETVVDGKELAVASVHLSWWDKGFQEEWARFEAVLKELNKPLLLAGD 180 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230 + E Q+ +G DA + Y+ + +RID++ + Sbjct: 181 FNNPAGQEGYQAILASP-LGLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTTK 239 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 E + + + + SDH + L+ Sbjct: 240 ELE--VENLHVVFDGNKGPQVSDHYGLNAILNW 270 >gi|302908054|ref|XP_003049782.1| hypothetical protein NECHADRAFT_56855 [Nectria haematococca mpVI 77-13-4] gi|256730718|gb|EEU44069.1| hypothetical protein NECHADRAFT_56855 [Nectria haematococca mpVI 77-13-4] Length = 515 Score = 44.8 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 37/262 (14%), Positives = 68/262 (25%), Gaps = 24/262 (9%) Query: 22 AAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE----TCGQKSYNGVAILSKYQPI 77 +I + DII +QE D ++L +H + S + S Sbjct: 251 LRFIVNSKADIIGIQE--DGDGERAKALAEALGWHYWASKVSHSILSKYPIESTSGNINR 308 Query: 78 EIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRF--- 134 + D F A + + +YD Sbjct: 309 SGGARIELDGDWQTVNFWVAHLNYKPYGPYDFCYSGMKADKVMQREYDSGRPTQVEDTLK 368 Query: 135 -LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTD 193 +++ + ++E + + K G D Sbjct: 369 AMKYDLRTADIEPLFLVGDFNAPSHLDWTDKRKKKNCGQG---KFNWPTSMKPTEAGMID 425 Query: 194 AIRATHDTHHLYSFWDYYA-DSWSKNKG-----IRIDHIMLSPEATSLLHSARIDTKPRG 247 + R H Y W+K+ G R+D I A + + + P+ Sbjct: 426 SYRVAHPDPDQDEGITYGPITPWNKDWGKEEPHERLDFIYY-MGAGLEVVDSWVMKPPKS 484 Query: 248 W----TKPSDHTPVIVSLDIPE 265 SDH+ V+ +I E Sbjct: 485 GHPLDEWTSDHSAVMTLFNISE 506 >gi|255071615|ref|XP_002499482.1| predicted protein [Micromonas sp. RCC299] gi|226514744|gb|ACO60740.1| predicted protein [Micromonas sp. RCC299] Length = 539 Score = 44.8 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 43/302 (14%), Positives = 82/302 (27%), Gaps = 61/302 (20%) Query: 1 MSVVTVATWNVNSIRA-------RIHNLAAWIKENNPDIICLQET--------KTED--K 43 +S V + T+NV A RI L + +P +ICLQE + + Sbjct: 257 LSQVRLLTYNV--WFAEHVALVDRIDGLTDIVMREDPHVICLQEVTHNILMLLHAQPWFE 314 Query: 44 NFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 ++ Y+ ++S N ++ + +T G Sbjct: 315 DYKGSPPPQQQYYTIIMFKRSMNKPDGSTRVSRRDFMTSDMGRYAVGFCGMNCGD----G 370 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 + L + +L Q + + + P Sbjct: 371 KELTVFTSHLES----------FISKERTSSDERVRQMKDALRVIDAVTERRANEYPGTA 420 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI-- 221 I+ D + G+ DA D +++ D + G Sbjct: 421 TRNGIFMGDTNWDETTDGDVPLP--EGWRDAWLTHGDGTEGFTY-DLRKNPMMG--GWLQ 475 Query: 222 -RIDHIM--------------LSPEATSLLHSARID-TKPRGWTK-----PSDHTPVIVS 260 R+D ++ + S + RG + PSDH ++V+ Sbjct: 476 KRLDRVLYRLSDFEVTGIKMVGTEPIKRKDGSVVTYVNEYRGRRETKPVLPSDHFGLMVT 535 Query: 261 LD 262 L Sbjct: 536 LK 537 >gi|269864719|ref|XP_002651673.1| exodeoxyribonuclease III [Enterocytozoon bieneusi H348] gi|220064093|gb|EED42383.1| exodeoxyribonuclease III [Enterocytozoon bieneusi H348] Length = 231 Score = 44.8 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 24/220 (10%), Positives = 54/220 (24%), Gaps = 17/220 (7%) Query: 3 VVTVATWNVNSIRARIH----NLAAWIKENNPDIICLQETKTED----KNFPFETL---- 50 +V + NVN IR+ W+ DI C QE + + F + Sbjct: 1 MVKIFCLNVNGIRSFEKFHKIPFNNWLLGLGYDIYCFQEIRGNEVSLRYLFTLDDFCTFA 60 Query: 51 ---QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107 H + N + + I+ + + + + + + Sbjct: 61 SFHSRAGRHGVATLVRKDNYCCATEEVRKGRILKTIHSNFVLYNCYMPYCSDESLIEAVM 120 Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPL--IFAGDYNIIPQPHDCYN 165 L + L + E + ++++ Sbjct: 121 ETYDKLTDVLNKEQHPVVILCGDMNATYSMCDNYLYMREYEQLHYVSEWSMSIDHISKVE 180 Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY 205 I + +N +T+ + D +Y Sbjct: 181 NPIQRGKLHTRDFYMKLQMSSENGIYTEKVAPRIDELPVY 220 >gi|242797316|ref|XP_002482987.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500] gi|218719575|gb|EED18995.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500] Length = 1249 Score = 44.8 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 19/48 (39%), Gaps = 3/48 (6%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQ 270 ID + S + + S DTKP W DH P+ D+ R Sbjct: 181 IDLVWASHNLANRVVSC--DTKPEWWYGA-DHVPISTQFDLTAIRVPP 225 >gi|212535218|ref|XP_002147765.1| reverse transcriptase, putative [Penicillium marneffei ATCC 18224] gi|210070164|gb|EEA24254.1| reverse transcriptase, putative [Penicillium marneffei ATCC 18224] Length = 1537 Score = 44.8 bits (104), Expect = 0.016, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 19/58 (32%), Gaps = 4/58 (6%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 ID ++ S E + I G SDH + DI P + + P Sbjct: 641 IDLVLASTELAEEMVKYGIHYTNYG----SDHQAIETEFDISVPDRPITERLLWKNAP 694 >gi|224012501|ref|XP_002294903.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220969342|gb|EED87683.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 2488 Score = 44.4 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 32/285 (11%), Positives = 69/285 (24%), Gaps = 40/285 (14%) Query: 3 VVTVATWNVNSIRARIHNL-----AAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57 ++ VA N+N I+E DI+ + E ++ + ++ Q Sbjct: 54 ILRVAINNINGTTFHQKGFEVAHEIQTIQELGIDIMAMCE---SNRAWTYKNKQEYERQT 110 Query: 58 ETCGQKSYNGVAIL-------------------SKYQPIEIVTHLPGDDLDVQARFIEAT 98 + A + + T G ++ R Sbjct: 111 HLLWHNTRTVFASCPTGAEGYQPGGNVLNINGPAAGRVKATGTDKWGRFCWMELRGQRDE 170 Query: 99 FTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP 158 + R+ +T+ R ++ L++ L Sbjct: 171 GWVIISAYRVCQEESHKPGALTAYMQQYTAMLSAGITRPNPRQQILDDLLHLITSKREQG 230 Query: 159 QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN 218 + + + + + Y+ +S Sbjct: 231 FRPILLMDANEDWVTNSHGKNQLADFMAAANLQDAFYERHQQSPPTYT----RGNS---- 282 Query: 219 KGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 R+D+I++ P A + G SDH V D+ Sbjct: 283 ---RLDYILVDPVALPCIRRVGYLGTHEGN--FSDHCLEYVDFDM 322 >gi|3859723|emb|CAA21997.1| glucose-repressible alcohol dehydrogenase transcriptional effector [Candida albicans] Length = 589 Score = 44.4 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 39/301 (12%), Positives = 74/301 (24%), Gaps = 53/301 (17%) Query: 17 RIHNLAAWIKENNPDIICLQE--TKT-EDKNFPFETLQSL-NYHI--------------- 57 R + L + N DI+C+QE TKT ++ P T Y Sbjct: 289 RKNLLEKEVLNYNTDIVCMQEVETKTFQEFWLPVMTANGYKGYFFSKTRSKTMSETDSKK 348 Query: 58 ---------------ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN 102 YN V + S + D A + Sbjct: 349 VDGCATFFKNDKFSLVHKQNFEYNSVCMGSDKYKKTKDLFNRFMNKDNIALISYLQHKES 408 Query: 103 TQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD 162 + + + N +L K ++ + ++ + Sbjct: 409 GEKIAVVNTHLHWDPAFNDVKALQVGILLEELQGIIKKYRHTNSNEDIKNSSIVVCGDFN 468 Query: 163 CYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF-------WDYYADSW 215 ++ G H ++ + ++ Sbjct: 469 SVKDSAVYQLFSTGASKGHEDMNGRDYGKFTEDGFHHPFKLKSAYEAVGELPFTNLTPAF 528 Query: 216 SKNKGIRIDHIMLS-PEATSLLHSARIDTKPRG-------WTKPSDHTPVIVSLDIPEPR 267 + N ID+I S P R+D + PSDH P++ + + + Sbjct: 529 TDN----IDYIWYSTPTLQVKGLLGRVDEEYTSHSIGFPDANFPSDHVPILAKFQLKKGK 584 Query: 268 K 268 K Sbjct: 585 K 585 >gi|301307705|ref|ZP_07213662.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 20_3] gi|300834379|gb|EFK64992.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 20_3] Length = 280 Score = 44.4 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 9/39 (23%), Positives = 19/39 (48%), Gaps = 2/39 (5%) Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 RID+I ++ ++ + + PSDH P+++ Sbjct: 241 RIDYIFVTKNI--HVNKYGTLNEFQYGHYPSDHFPIMIE 277 >gi|282892485|ref|ZP_06300819.1| hypothetical protein pah_c260o038 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281497767|gb|EFB40131.1| hypothetical protein pah_c260o038 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 346 Score = 44.4 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 47/271 (17%), Positives = 79/271 (29%), Gaps = 41/271 (15%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKN------FPFETLQSLN---------------Y 55 R + I+ NPD+I QE + F + + Sbjct: 88 RCSRVVELIQAINPDLIGSQE--LQQDQVEDLLSFLGDEYAFYGKGTLDGKMKGEVNGIF 145 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + ++ V +S +E + + I N ++ Sbjct: 146 YRKSRFNVDNESVLFMSSTPHTP---GKDPYSFARTLTILELEDFVTGKRFAIANAHVAF 202 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 G+ + RF+ ++ P+I D N P D ++ D Sbjct: 203 GSIDSRDY-------SVRFMASHISKMAKRLPVIITADLNTFPHRQDIKKFPAYDGDYLH 255 Query: 176 TLEVRQSFQKLQNMGF-----TDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230 L QN + D +D S + G+ +DH+ + Sbjct: 256 RLLTSAGLLNAQNTSLLGFLGPLSTYTNDDGETKKGGFDNRFLS-TGTPGVFLDHVYVGG 314 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 T LLH+ I+ PSDH PVIV L Sbjct: 315 GITVLLHA--IEPAKVDQQFPSDHLPVIVDL 343 >gi|262382996|ref|ZP_06076133.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|262295874|gb|EEY83805.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] Length = 280 Score = 44.4 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 9/39 (23%), Positives = 19/39 (48%), Gaps = 2/39 (5%) Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 RID+I ++ ++ + + PSDH P+++ Sbjct: 241 RIDYIFVTKNI--HVNKYGTLNEFQYGHYPSDHFPIMIE 277 >gi|260170324|ref|ZP_05756736.1| Endonuclease/exonuclease/phosphatase [Bacteroides sp. D2] Length = 297 Score = 44.4 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 32/265 (12%), Positives = 69/265 (26%), Gaps = 25/265 (9%) Query: 4 VTVATWNVN-----SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 + VAT+N+ R +A IK+ + +I +E + + Q + + Sbjct: 53 MRVATYNLQVETGTGWTNRRERVAQLIKDYDFEICGFEE--ASWEQRSYLGTQLASDYQI 110 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + + + LD + T I + N Sbjct: 111 LAYGRDTGNDDNKAGEMSGILYKKSRYTLLDAGRFWFSETPDIPSNGWDETNFKRFCVWG 170 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 K ++ + + + + + N E Sbjct: 171 KFKDSKTQKEFYLFETHMPLADNARKHACQMLVDAVSDKAKDNTPAFCTGDFNATPDAPE 230 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 + + A L++F RID I + Sbjct: 231 IAT-TICQSGILKDAYREAAVQHGALFTFPSKKT---------RIDFIFV--------KH 272 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263 A + + + SDH P+++ ++I Sbjct: 273 ATVLSTRTIVSSLSDHYPMVIVVEI 297 >gi|57640238|ref|YP_182716.1| membrane-bound metal-dependent hydrolase [Thermococcus kodakarensis KOD1] gi|57158562|dbj|BAD84492.1| membrane-bound metal-dependent hydrolase [Thermococcus kodakarensis KOD1] Length = 583 Score = 44.4 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 37/249 (14%), Positives = 64/249 (25%), Gaps = 52/249 (20%) Query: 21 LAAWIKENNPDIICLQET--KTED---KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75 L ++E+ PDII QE ++ P L Y E Sbjct: 382 LVKLLREHEPDIIASQEVVGGMIANGYQDVPLMLSAYLGYAYEYKPAVE----GTYGIAI 437 Query: 76 PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135 + G+ + + L I + + G + Sbjct: 438 FSHWRMNTEGELNLKSVGQARPAQKVMIEELGITLVNVHMGLSEEERAMQAEELLSFAES 497 Query: 136 RFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAI 195 A+ + GD N P DA Sbjct: 498 EPAAH--------VILGDTNAEPDEKAIQIITQEYKDAF--------------------- 528 Query: 196 RATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHT 255 + Y+F + D +N ID+I+L + + + + SDH Sbjct: 529 ----EERPPYTF--NWGDIDIEN----IDYILLRRGWPAKVKDYGCLCEV----EVSDHR 574 Query: 256 PVIVSLDIP 264 PV +++P Sbjct: 575 PVWALIELP 583 >gi|116206178|ref|XP_001228898.1| hypothetical protein CHGG_02382 [Chaetomium globosum CBS 148.51] gi|88182979|gb|EAQ90447.1| hypothetical protein CHGG_02382 [Chaetomium globosum CBS 148.51] Length = 1236 Score = 44.4 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 18/55 (32%), Gaps = 4/55 (7%) Query: 219 KGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDS 273 G ID ++ S E + + G SDH + DI P D Sbjct: 286 YGSTIDLVLASEELAEAVIRCGVHRTEHG----SDHRAIETVFDIEVPVPTHHDR 336 >gi|322391715|ref|ZP_08065182.1| RgfB protein [Streptococcus peroris ATCC 700780] gi|321145425|gb|EFX40819.1| RgfB protein [Streptococcus peroris ATCC 700780] Length = 272 Score = 44.4 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 37/278 (13%), Positives = 84/278 (30%), Gaps = 26/278 (9%) Query: 4 VTVATWNVNSIRARIHN--------LAAWIKENNPDIICLQE-----TKTEDKN----FP 46 + T N +S + L I ENN D+IC QE T ++ FP Sbjct: 1 MKFLTLNTHS---WMEKNPEEKFQLLLQDIFENNYDLICFQEINQEITSSQVDAGPFYFP 57 Query: 47 FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 + + + H + + +A + G D + I + I + + Sbjct: 58 LPSAEPI--HQDHYVRLLVEQLAEKGLKYYWTWAYNHIGYDRYHEGVAILSKTPIEAREI 115 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG-DYNIIPQPHDCYN 165 + ++ P + + K + + + + + + Sbjct: 116 LVSDVDDPTDYHTRRVALAETVVEGKELAVASVHLSWWGKGFQEEWARFEAVLKELNKPL 175 Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225 + + + E Q+ + DA + Y+ ++ +RID+ Sbjct: 176 LLAGDFNNPAGQEGYQAILASP-LELQDAFEVAKERRGSYTVPPEIDGWKGNSEPLRIDY 234 Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + + + + S + + + SDH + L Sbjct: 235 VFTTKDI--QIESLHVVFDGKQNPQVSDHYGLQAELSW 270 >gi|229089031|ref|ZP_04220388.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-44] gi|228694283|gb|EEL47902.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-44] Length = 353 Score = 44.4 bits (103), Expect = 0.016, Method: Composition-based stats. Identities = 44/273 (16%), Positives = 88/273 (32%), Gaps = 41/273 (15%) Query: 18 IHNLAAWIKENNPDIICLQETKTEDKNF------PFETLQS--------LNYHIETCGQK 63 I N+ +++++ + D I +QE ++K+ ++ Q Y+ Sbjct: 94 IGNMVSFLQKEDSDFILVQE--MDEKSLRSFDVNEYKAFQDGLKGFASTFGYNFNAQWVP 151 Query: 64 ---------SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 + +G+ SKY+ E+ + + E I + + N Sbjct: 152 VPIKKPHGYTKSGLGSFSKYKVEEVTRYQLPGREMWLRQLFELDRAIVEHKIPVDNGKYL 211 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 + + YD S K+ + F + + GDY ++ + + D Sbjct: 212 RMVNVHLSAYDKGGSIRKQQVEFLKEYMNKHYKN---GDYIVLGGDWNQLLSDVQLQDPK 268 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG----IRIDHIMLSP 230 F E + +L + D S W + S +G ID ++SP Sbjct: 269 FKEEWPEWLVQLPEDFTDGGFQWAVDD----SVWTVRDNVKSYVEGENFVTIIDGFLVSP 324 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + + + SDH PV L + Sbjct: 325 N----VEIVSVQGHDLKFEN-SDHNPVSTVLKL 352 >gi|313125896|ref|YP_004036166.1| metal-dependent hydrolase [Halogeometricum borinquense DSM 11551] gi|312292261|gb|ADQ66721.1| metal-dependent hydrolase [Halogeometricum borinquense DSM 11551] Length = 283 Score = 44.4 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 39/280 (13%), Positives = 71/280 (25%), Gaps = 43/280 (15%) Query: 4 VTVATWNV------NSIRA---RIHNLAAWIKENNPDIICLQE-TKTEDKNFPFETLQSL 53 V V ++NV + A R + ++ + PD++CLQE K + F + L Sbjct: 20 VRVLSFNVRYDTDDDGPDAWPHRRDDAVRLVRYHRPDVVCLQEPLKHQLDAF-RDGLDEY 78 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 + + A SK T +RF + Sbjct: 79 EW-VAVPRTGGNAADATDSKETDDAASTGESVPVGYDASRFSLEDSET----FWLSETPE 133 Query: 114 PHGNPITSTKYDDK------ISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167 G+ AS L+ + + + Sbjct: 134 EPGSVGWDATLPRILTRATLQGESGETFHVASVHLDNDGVKARLEGAKLARDRLAQLDGP 193 Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227 + C ++ + A H H + ++ + RID++ Sbjct: 194 VILAGDCNATPDSDPYEAVTEAFADARHVAKHGHHGP----EKTMHHFTGDPTERIDYVF 249 Query: 228 L-------SPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 + S PSDH PV+ Sbjct: 250 VRECDVRLSATLADRTREGY----------PSDHFPVVAD 279 >gi|225557534|gb|EEH05820.1| inositol phosphosphingolipids phospholipase C [Ajellomyces capsulatus G186AR] Length = 473 Score = 44.4 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 50/346 (14%), Positives = 88/346 (25%), Gaps = 66/346 (19%) Query: 2 SVVTVATWNVNSIRA----RIHNLAAW-----IKENNPDIICLQETKTEDK--NFPFETL 50 + + V T N ++ R L + EN P I+ LQE + + N ET Sbjct: 11 AKINVLTLNCWGLKYISEYRRERLIEIGKRIALSENTPHIVGLQECWSREDYHNIRRETR 70 Query: 51 QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ---TLR 107 + L Y G+AILSK+ E H + A F + +R Sbjct: 71 EILPYGKFYFSGIFGGGLAILSKWPIEESTMHAYPLNGRPSAIFRGDWYVGKGVACARIR 130 Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP--------- 158 IG + + + + E + Sbjct: 131 IGPAAADIVDVFCTHLHAPYEREPRDSYICHRTAQAWEIAKLMKAAAEKGHLVVGLGDFN 190 Query: 159 -----------------QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT 201 + + A + + + F + Sbjct: 191 MLPQSFAHRLITSHAPVKDVWGHLHPDSSIGAAIDSAEMSRKKPVPSADFNISENGATCD 250 Query: 202 HHLYSF-WDYYADSWSKNKG-------------IRIDHIMLSPEATSLLHS--------- 238 L ++ W K +G R+D+I + + S S Sbjct: 251 SILNTWRWSKSQQKRLKREGPMPVDGQRPDPLAKRLDYIFVGDGSFSNFSSLRKWDIESA 310 Query: 239 --ARIDTKPRGWTKPSDHTPVIVSLDIP-EPRKKQQDSTSQNMKPI 281 ++ P SDH V ++ + D + PI Sbjct: 311 RVCMLERHPHLHCSLSDHFGVEATIKLDIAKEADDGDEGPSSFLPI 356 >gi|126653851|ref|ZP_01725711.1| endonuclease/exonuclease/phosphatase family protein [Bacillus sp. B14905] gi|126589639|gb|EAZ83777.1| endonuclease/exonuclease/phosphatase family protein [Bacillus sp. B14905] Length = 1502 Score = 44.4 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 16/81 (19%), Positives = 28/81 (34%), Gaps = 12/81 (14%) Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT--- 243 + D Y++ Y +S +DHI++S + I Sbjct: 983 HEGQLMTNMINKVDDSDRYTYV-YQGNSQV------LDHILVSNNLVNK-TEIDILHINA 1034 Query: 244 KPRGWT-KPSDHTPVIVSLDI 263 + SDH PV+V +D+ Sbjct: 1035 DFTDMAGRASDHDPVMVQIDL 1055 >gi|284039823|ref|YP_003389753.1| endonuclease/exonuclease/phosphatase [Spirosoma linguale DSM 74] gi|283819116|gb|ADB40954.1| Endonuclease/exonuclease/phosphatase [Spirosoma linguale DSM 74] Length = 266 Score = 44.4 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 34/267 (12%), Positives = 70/267 (26%), Gaps = 40/267 (14%) Query: 4 VTVATWNVN-------SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56 + V T+N++ + + +A I PD++ LQE + Sbjct: 32 LKVMTYNIHHCNPPSAGSKIDVEAIARVITAEKPDLVALQEVDVNTE------------- 78 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 + + + D + +++ + G Sbjct: 79 -RSGKGLNQAKELARLTGMNFFFSKAIDHQGGDYGVAVLSRFPILDSTRFILPIDPTIGG 137 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 T + + KR + ++ E + + I I+ + T Sbjct: 138 ETRTIAAITVEPTKGKRMIFASTHLDLKEPNRLTQSELIIRHFGATDLPVILAGDFNAQT 197 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 + + T KN ID +M+ + Sbjct: 198 DSKVIQLFDQTFVRSCQSCAPTIPV---------------KNPNRAIDFVMVKQGGSLKS 242 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263 S R+ + SDH PV+V L + Sbjct: 243 TSTRVVDE----QYASDHLPVVVELKL 265 >gi|149031529|gb|EDL86496.1| similar to putative TRAF and TNF receptor associated protein, isoform CRA_a [Rattus norvegicus] Length = 305 Score = 44.4 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 9/44 (20%) Query: 2 SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQET 38 S ++ TWN++ + RAR + + + +PD++ LQE Sbjct: 57 STISFITWNIDGLDGCNLPERAR--GVCSCLALYSPDVVFLQEV 98 >gi|110640994|ref|YP_668722.1| hypothetical protein ECP_0804 [Escherichia coli 536] gi|191174511|ref|ZP_03036010.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli F11] gi|300992083|ref|ZP_07179785.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 200-1] gi|110342586|gb|ABG68823.1| hypothetical protein YbhP [Escherichia coli 536] gi|190905224|gb|EDV64864.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli F11] gi|300305412|gb|EFJ59932.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 200-1] gi|324011114|gb|EGB80333.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 60-1] Length = 253 Score = 44.4 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 34/267 (12%), Positives = 65/267 (24%), Gaps = 32/267 (11%) Query: 5 TVATWNVN-SI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN--YH 56 V T N++ R + L ++ + DI+CLQE +++ H Sbjct: 11 KVLTINIHKGFTAFNRRFILPELRDAVRTVSADIVCLQEV-MGAHEVHPLHVENWPDTSH 69 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 E ++ A +E + +++ R Sbjct: 70 YEFLADTMWSDFAYGRNAVYLEGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVP 129 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + + R +Q L E + D + D + N Sbjct: 130 PMTGKAIHVMCVHLGLREAHRQAQLAMLAEWVNELPDGEPVLVAGDFNDWRQKANHPLKV 189 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 + +R+D I + + Sbjct: 190 QAGLDEIFTRAHGRPARTFPVQFPL-------------------LRLDRIYV----KNAS 226 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263 SA R W SDH P+ + + Sbjct: 227 ASAPTALPLRTWRHLSDHAPLSAEIHL 253 >gi|182624597|ref|ZP_02952379.1| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens D str. JGS1721] gi|177910201|gb|EDT72589.1| endonuclease/exonuclease/phosphatase family protein [Clostridium perfringens D str. JGS1721] Length = 263 Score = 44.4 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 38/269 (14%), Positives = 77/269 (28%), Gaps = 20/269 (7%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQE----TKTEDKNFPFETLQSLN 54 + + T N +S +I LA I E D+I LQE K K L+ N Sbjct: 1 MKLLTLNCHSWLEEEQLYKIKYLAKTIVEEKYDVIALQEASQSIKASVK---EGNLKEDN 57 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 Y + + + +Y + +H+ D + + +N+++ I + Sbjct: 58 YGLVLIEEINK---LGGEEYHLVWDYSHIGYDIYEEGLCILTKHKIVNSESFYISKSHSK 114 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 + ++ + H + Sbjct: 115 TFWRSRKIVKATIDIKNENIDFYSCHMGWWHDKEESFTFQVENLLAHAKESKNRAFFMGD 174 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD--SWSKNKG-IRIDHIMLSPE 231 F + + I + S + W N G +RID I + Sbjct: 175 FNNNAFLKNEGYDFLKSNGLIDTYDLAENKDSGVTVNKNIAGWEDNTGELRIDIIFTNRN 234 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 + ++ +R+ + SDH + + Sbjct: 235 --TKVYDSRVIFNGKNKEVVSDHFGLEIE 261 >gi|238878752|gb|EEQ42390.1| conserved hypothetical protein [Candida albicans WO-1] Length = 785 Score = 44.4 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 39/301 (12%), Positives = 74/301 (24%), Gaps = 53/301 (17%) Query: 17 RIHNLAAWIKENNPDIICLQE--TKT-EDKNFPFETLQSL-NYHI--------------- 57 R + L + N DI+C+QE TKT ++ P T Y Sbjct: 485 RKNLLEKEVLNYNTDIVCMQEVETKTFQEFWLPVMTANGYKGYFFSKTRSKTMSETDSKK 544 Query: 58 ---------------ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN 102 YN V + S + D A + Sbjct: 545 VDGCATFFKNDKFSLVHKQNFEYNSVCMGSDKYKKTKDLFNRFMNKDNIALISYLQHKES 604 Query: 103 TQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD 162 + + + N +L K ++ + ++ + Sbjct: 605 GEKIAVVNTHLHWDPAFNDVKALQVGILLEELQGIIKKYRHTNSNEDIKNSSIVVCGDFN 664 Query: 163 CYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF-------WDYYADSW 215 ++ G H ++ + ++ Sbjct: 665 SVKDSAVYQLFSTGASKGHEDMNGRDYGKFTEDGFHHPFKLKSAYEAVGELPFTNLTPAF 724 Query: 216 SKNKGIRIDHIMLS-PEATSLLHSARIDTKPRG-------WTKPSDHTPVIVSLDIPEPR 267 + N ID+I S P R+D + PSDH P++ + + + Sbjct: 725 TDN----IDYIWYSTPTLQVKGLLGRVDEEYTSHSIGFPDANFPSDHVPILAKFQLKKGK 780 Query: 268 K 268 K Sbjct: 781 K 781 >gi|283798597|ref|ZP_06347750.1| exodeoxyribonuclease III [Clostridium sp. M62/1] gi|291073681|gb|EFE11045.1| exodeoxyribonuclease III [Clostridium sp. M62/1] Length = 324 Score = 44.4 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 33/293 (11%), Positives = 71/293 (24%), Gaps = 39/293 (13%) Query: 4 VTVATWNVNSIRAR-----IHNLAAWIKENNPDIICLQETK--TEDKNFPFETLQSLNYH 56 + + T N +S+ R + I + PD+I LQE + + E L+ + Sbjct: 1 MKLLTLNTHSLEERDYEKKLKIFTEEILKEKPDVIALQEVNQPLDGEEADGEVLKKSGFI 60 Query: 57 -IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + V + + + G + + + + + + + Sbjct: 61 PCPSEPPSCAVPVRLGNHGLRAAQLLRRSGFPVFWTWTSAKVGYGKYDEGMALMSRRPIA 120 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + K A + + + + Sbjct: 121 EVSQLFLTDGRDYNNWKTRKALAITLNIGKGEEPVS--FVTAHMGWWKDEEEPFSRQWER 178 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHL-Y-----SFWD--YYADSWSKN--------- 218 S ++ ++ Y S W Y A Sbjct: 179 LDAFASSLRRRADVWLMGDFNTQDSVRGEGYDRITASGWTDAYRAAGKRDGGITVPGAID 238 Query: 219 --------KGIRIDHIMLSP--EATSLLHSARID-TKPRGWTKPSDHTPVIVS 260 G+RID+I ++ + + R SD PV+ Sbjct: 239 GWREDGEVPGMRIDYIWYGRKHDSGDRKSRGDVLIEEVRTVFNGSD-CPVVSD 290 >gi|167581698|ref|ZP_02374572.1| endonuclease/exonuclease/phosphatase family superfamily protein [Burkholderia thailandensis TXDOH] Length = 135 Score = 44.4 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 17/38 (44%), Gaps = 4/38 (10%) Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 D ++ + ID G T+ SDH P+++ L Sbjct: 99 DFAFVTDTLAYRISRCEID----GATRASDHQPIVLEL 132 >gi|324517012|gb|ADY46703.1| Unknown [Ascaris suum] Length = 323 Score = 44.4 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 48/304 (15%), Positives = 85/304 (27%), Gaps = 47/304 (15%) Query: 1 MSVVTVATW----NV-NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN- 54 +V+T TW NV N + + I PDI+ LQE E++ + ++ L Sbjct: 27 FTVMTFNTWQSGKNVENGLFKVAKH----ISYVYPDIVALQEI--ENETVIGQLIKMLGR 80 Query: 55 --------Y----------HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIE 96 Y H + ++ +K + L + R Sbjct: 81 RWSGVANNYSYPDTAILTRHPIINNSIATTARSVGAKILLPIHNRTVQIYSLHLDYRSYG 140 Query: 97 ATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYN- 155 N + N + ++++ +I + + EEPL+ GD+N Sbjct: 141 PYAANNKLVSYATQIMAGERNIDGNGRFENMREFILDDGFRRAVKRSKEEPLLVCGDFNA 200 Query: 156 IIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW 215 + + + + + W + Sbjct: 201 PSHLDWTEETKDLHGGWVFDWPATKMLQGEAAMEDSFRKLHPNPLLKTGNT-WSTVEKTT 259 Query: 216 SKNKGI-------RIDHIMLSPEATSLLHSA------RIDTKPRGW--TKPSDHTPVIVS 260 S G RID I ++S + KP W PSDH V+ Sbjct: 260 SAGWGWTIPEPQDRIDFIFYKSPLLEPINSYTYQGRDVVWPKPYHWHNDYPSDHFAVVTK 319 Query: 261 LDIP 264 I Sbjct: 320 FTIS 323 >gi|187607433|ref|NP_001120209.1| sphingomyelin phosphodiesterase 2, neutral membrane (neutral sphingomyelinase) [Xenopus (Silurana) tropicalis] gi|166796474|gb|AAI59354.1| LOC100145256 protein [Xenopus (Silurana) tropicalis] Length = 395 Score = 44.4 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 38/267 (14%), Positives = 72/267 (26%), Gaps = 27/267 (10%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDK--NFPFETLQSLNYHIETCGQKSYNGVAILSKY 74 R+ + + + D+ LQE ++ Y +G+ + S++ Sbjct: 29 RLALIGQLLSQQCYDLALLQEIWSDKDYSELRHRLSDVFPYTHRFKSGVIGSGLCVFSQF 88 Query: 75 QPIEI----------VTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124 I+ + D + +L + Y Sbjct: 89 PIIDCLQYQFSLNGFPYMMNHGDWFCGKAVGLVKLKAYGFLCHVYVTHLHAEYCRENDCY 148 Query: 125 D-DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 +I +F + ++ AGD N+ P W LE + Sbjct: 149 RSHRILQSWELAQFIRHTSNNSDVVVLAGDLNMHPGDLGVKLVREWTGLKDSYLECTEYE 208 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM--LSPEATSLLHSARI 241 + T ++ +GIRID+IM +P Sbjct: 209 GPPDGCTLIPSNPFTDPQEL---------KNFP--QGIRIDYIMYKSAPGIAVSCQQVTT 257 Query: 242 DTKP-RGWTKPSDHTPVIVSLDIPEPR 267 ++ R T SDH V +L + Sbjct: 258 GSQSSRSDTPFSDHEIVTATLRLQRIP 284 >gi|261332364|emb|CBH15359.1| RNA editing 3' exouridylylase MP99 [Trypanosoma brucei gambiense DAL972] Length = 929 Score = 44.4 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 39/303 (12%), Positives = 68/303 (22%), Gaps = 56/303 (18%) Query: 2 SVVTVATWNV--------------NSI----RARIHNLAAWIKENNPDIICLQETKTEDK 43 S + V TWNV + I R LA ++ + D+I +QE Sbjct: 637 STLRVVTWNVQFSRHSGERTPLGRDGIDWCTSTRYVALAQTLEGLDADVIGMQEV----- 691 Query: 44 NFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 + ++ ++ + + Sbjct: 692 ------EPAWCKYLSQQPWVREKYAMTCCEHSHAIQPWGVMLLVRRSLCVTSTHHANVPA 745 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 + + + + + P + Sbjct: 746 FSGHTSVMPEVTVVVSEGVPVTVGSMHLLAPYNQNNISNRTTQLDNLTKRLRTRPPINGK 805 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYS---------FWDYYADS 214 +I D F + F MGF DA H + S Y A Sbjct: 806 QAGLIVMGD--FNDCAKNYFTFPPEMGFKDAWLLLHPDEGVSSKSGHTIDGDRNPYAAQI 863 Query: 215 WSKNKGIRIDHIMLSPEATSLL----------------HSARIDTKPRGWTKPSDHTPVI 258 K R D ++ S + ID + PSDH ++ Sbjct: 864 IEKEFYGRADRVLFSSRNLQPIQTEIIGTTSVREMGITKQVDIDKDVPEYLYPSDHFGLL 923 Query: 259 VSL 261 V Sbjct: 924 VEF 926 >gi|108797936|ref|YP_638133.1| endonuclease/exonuclease/phosphatase [Mycobacterium sp. MCS] gi|119867032|ref|YP_936984.1| endonuclease/exonuclease/phosphatase [Mycobacterium sp. KMS] gi|108768355|gb|ABG07077.1| Endonuclease/exonuclease/phosphatase [Mycobacterium sp. MCS] gi|119693121|gb|ABL90194.1| Endonuclease/exonuclease/phosphatase [Mycobacterium sp. KMS] Length = 255 Score = 44.4 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 33/266 (12%), Positives = 75/266 (28%), Gaps = 22/266 (8%) Query: 4 VTVATWNV-NSIRAR------IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56 + VAT+N+ + R+ + LA I+E + DI+ LQE L ++ Sbjct: 1 MRVATFNILHG-RSVHDGEVDVDRLAQSIRELDADIVALQEVDLHQPRSGTTDLTAVAAE 59 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT-LRIGNLYLPH 115 + + T + + F T +R+ + +P Sbjct: 60 AMRAVSHRFVAAIAGTPGATWMAATGREQPGTAAYGIALLSRFPAETWQVVRLPRIPVPF 119 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + ++ R + L + + +P + + + F Sbjct: 120 PMYLPGPNRVQIVNEEPRAAMVGTFDTPLGPLTVANTHLSFVPGWNRVQMRHLVRDLRGF 179 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 + +F +A +DH++ + + Sbjct: 180 EGPRMLLGDLNMSPPTPARWARMRSLGEGLTF-PAHAPDRQ------LDHVL-TDDPRLR 231 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 + + P SDH ++V + Sbjct: 232 VEKCSAVSLP-----ISDHRALVVDI 252 >gi|29293904|gb|AAO63566.1| RNA editing complex protein MP99 [Trypanosoma brucei] Length = 907 Score = 44.4 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 39/303 (12%), Positives = 68/303 (22%), Gaps = 56/303 (18%) Query: 2 SVVTVATWNV--------------NSI----RARIHNLAAWIKENNPDIICLQETKTEDK 43 S + V TWNV + I R LA ++ + D+I +QE Sbjct: 615 STLRVVTWNVQFSRHSGERTPLGRDGIDWCTSTRYVALAQTLEGLDADVIGMQEV----- 669 Query: 44 NFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 + ++ ++ + + Sbjct: 670 ------EPAWCKYLSQQPWVREKYAMTCCEHSHAIQPWGVMLLVRRSLCVTSTHHANVPA 723 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 + + + + + P + Sbjct: 724 FSGHTSVMPEVTVVVSEGVPVTVGSMHLLAPYNQNNISNRTTQLDNLTKRLRTRPPINGK 783 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYS---------FWDYYADS 214 +I D F + F MGF DA H + S Y A Sbjct: 784 QAGLIVMGD--FNDCAKNYFTFPPEMGFKDAWLLLHPDEGVSSKSGHTIDGDRNPYAAQI 841 Query: 215 WSKNKGIRIDHIMLSPEATSLL----------------HSARIDTKPRGWTKPSDHTPVI 258 K R D ++ S + ID + PSDH ++ Sbjct: 842 IEKEFYGRADRVLFSSRNLQPIQTEIIGTTSVREMGITKQVDIDKDVPEYLYPSDHFGLL 901 Query: 259 VSL 261 V Sbjct: 902 VEF 904 >gi|34392550|dbj|BAC82603.1| pol-like protein [Takifugu rubripes] Length = 1234 Score = 44.4 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 29/230 (12%), Positives = 54/230 (23%), Gaps = 22/230 (9%) Query: 1 MSVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 M V T N+N R + K D++ LQET + N + + Sbjct: 1 MHTFRVGTLNINGARDERKRALVFDTTKIKRVDVMFLQETHSNRNNEADWEKEWEGQALL 60 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + GV +L + + + I Sbjct: 61 SHNTTLSGGVGLLFSRGFTPSSLEVEHVVRGRCLMVKARLQNHSLVFINIYA-----PTN 115 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 T + K + + + + + A Sbjct: 116 GTEKELSRKKVGTVLNGCGDDLLFLVGDFNCTESFLDRDHADPHLASFLSLTETA----- 170 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 + G D R H Y+++ S + R+D +L Sbjct: 171 -------GYSHGLVDVWRRMHTDSRQYTWF---RLSEDRISSARLDRFLL 210 >gi|71747102|ref|XP_822606.1| RNA editing 3' exouridylylase MP99 [Trypanosoma brucei TREU927] gi|70832274|gb|EAN77778.1| RNA editing 3' exouridylylase MP99 [Trypanosoma brucei] Length = 907 Score = 44.4 bits (103), Expect = 0.017, Method: Composition-based stats. Identities = 39/303 (12%), Positives = 68/303 (22%), Gaps = 56/303 (18%) Query: 2 SVVTVATWNV--------------NSI----RARIHNLAAWIKENNPDIICLQETKTEDK 43 S + V TWNV + I R LA ++ + D+I +QE Sbjct: 615 STLRVVTWNVQFSRHSGERTPLGRDGIDWCTSTRYVALAQTLEGLDADVIGMQEV----- 669 Query: 44 NFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 + ++ ++ + + Sbjct: 670 ------EPAWCKYLSQQPWVREKYAMTCCEHSHAIQPWGVMLLVRRSLCVTSTHHANVPA 723 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 + + + + + P + Sbjct: 724 FSGHTSVMPEVTVVVSEGVPVTVGSMHLLAPYNQNNISNRTTQLDNLTKRLRTRPPINGK 783 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYS---------FWDYYADS 214 +I D F + F MGF DA H + S Y A Sbjct: 784 QAGLIVMGD--FNDCAKNYFTFPPEMGFKDAWLLLHPDEGVSSKSGHTIDGDRNPYAAQI 841 Query: 215 WSKNKGIRIDHIMLSPEATSLL----------------HSARIDTKPRGWTKPSDHTPVI 258 K R D ++ S + ID + PSDH ++ Sbjct: 842 IEKEFYGRADRVLFSSRNLQPIQTEIIGTTSVREMGITKQVDIDKDVPEYLYPSDHFGLL 901 Query: 259 VSL 261 V Sbjct: 902 VEF 904 >gi|221198087|ref|ZP_03571133.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans CGD2M] gi|221204354|ref|ZP_03577371.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans CGD2] gi|221175211|gb|EEE07641.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans CGD2] gi|221182019|gb|EEE14420.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans CGD2M] Length = 285 Score = 44.4 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 4/38 (10%) Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 D ++ L ID G + SDH P+++ L Sbjct: 250 DFAFVTDTLLPRLARCEID----GAVRASDHQPIVLEL 283 >gi|221212763|ref|ZP_03585739.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans CGD1] gi|221166976|gb|EED99446.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans CGD1] Length = 285 Score = 44.4 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 4/38 (10%) Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 D ++ L ID G + SDH P+++ L Sbjct: 250 DFAFVTDTLLPRLARCEID----GAVRASDHQPIVLEL 283 >gi|161524628|ref|YP_001579640.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans ATCC 17616] gi|189350616|ref|YP_001946244.1| metal-dependent hydrolase [Burkholderia multivorans ATCC 17616] gi|160342057|gb|ABX15143.1| Endonuclease/exonuclease/phosphatase [Burkholderia multivorans ATCC 17616] gi|189334638|dbj|BAG43708.1| metal-dependent hydrolase [Burkholderia multivorans ATCC 17616] Length = 285 Score = 44.4 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 4/38 (10%) Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 D ++ L ID G + SDH P+++ L Sbjct: 250 DFAFVTDTLLPRLARCEID----GAVRASDHQPIVLEL 283 >gi|149041026|gb|EDL94983.1| angel homolog 2 (Drosophila) (predicted), isoform CRA_b [Rattus norvegicus] Length = 359 Score = 44.4 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 17/97 (17%), Positives = 32/97 (32%), Gaps = 5/97 (5%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73 R N+ IK + D++CLQE ++ ++ E L+SL YH E + Sbjct: 178 RFPNILKEIKHFDADVLCLQEV--QEDHYGTEIRPSLESLGYHCEYKMKTGRKPDGCAIC 235 Query: 74 YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 ++ + + L + Sbjct: 236 FKHSKFSLLSVNPVEFCRRDIPLLDRDNIGLVLLLQP 272 >gi|146421647|ref|XP_001486768.1| hypothetical protein PGUG_00145 [Meyerozyma guilliermondii ATCC 6260] Length = 497 Score = 44.4 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 41/313 (13%), Positives = 68/313 (21%), Gaps = 70/313 (22%) Query: 3 VVTVATWNV-NSIRARI-HNLAAWIKENN---PDI---------ICLQET-KTEDKNF-- 45 + + NV N R + +W+K I + LQE K + + Sbjct: 196 TFRIYSHNVRNGGRDILDPGEESWLKRYRKITASIKFNSQLNTVVALQEVYKFQLDDIMR 255 Query: 46 -------PFE-TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA 97 P E ++ Q + + + + D +E Sbjct: 256 DLNRYSPPEEPEWEAYGVGRIDGDQLGEFVPILFKTSEWEMVFYDSIWLNEDNPRMALEG 315 Query: 98 TFTINTQTLRIGNLYLPHGNPITSTKYDDKIS-----WIKRFLRFASQRLELEEPLIFAG 152 + + L GN I + + P G Sbjct: 316 WDAKYLRIVSYVTLKHVSGNYINVFNTHLDHMGELSKQGLAQIILDKMNSINQWPSFLCG 375 Query: 153 DYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYA 212 D N P + A + H S + Sbjct: 376 DLNTEPNEKAYQIITEQFRN------------------LAKLTTAFNKYGHSKSTVTGFE 417 Query: 213 DSWSKNKGIRIDHIML------------------SPE----ATSLLHSARIDTKPRGWTK 250 N G ID+I SP L S + Sbjct: 418 GEVLLNGGQNIDYIFAPSYTAKLGETVLCDKLTTSPPSERYLDLRLKSFGMLHSKFNGLY 477 Query: 251 PSDHTPVIVSLDI 263 SDH P++ + Sbjct: 478 MSDHRPIVADFTL 490 >gi|116317784|emb|CAH65761.1| H0215A08.3 [Oryza sativa Indica Group] Length = 1186 Score = 44.4 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 37/259 (14%), Positives = 77/259 (29%), Gaps = 43/259 (16%) Query: 9 WNVNSIRARIHN--LAAWIKENNPDIICLQETKTED------KNFPFETLQSLNYHIETC 60 WNV + R H + + + + + CLQETK +D F L Y Sbjct: 11 WNVRGLNDRAHRADVRSVVTDARCSVACLQETKLDDIPVTLAAQFLSANLSDFLY----- 65 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + + + + D ++Q + + + + Sbjct: 66 -LPADETRGGILLAWDQSVASCDSLSLGDFSLTARLQFVDGSSQWITVVYGPQAESDKLR 124 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 R P + AGD+N+I Q D N + Sbjct: 125 F------------LQELRDIRNARSGPWVVAGDFNLIYQDQDKNNANLNRR--------- 163 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + + ++ H +++ ++ W+ R+D I + + + Sbjct: 164 -MMGRYRRAINDLSLHELHLNGRSFTW----SNGWTNPTLERLDRIFYTSDWEDMFPQCF 218 Query: 241 IDTKPRGWTKPSDHTPVIV 259 + P + SDH P+++ Sbjct: 219 LMALP---STVSDHCPLLL 234 >gi|296420844|ref|XP_002839978.1| hypothetical protein [Tuber melanosporum Mel28] gi|295636186|emb|CAZ84169.1| unnamed protein product [Tuber melanosporum] Length = 493 Score = 44.4 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 57/321 (17%), Positives = 101/321 (31%), Gaps = 46/321 (14%) Query: 4 VTVATWNVNSIR-------ARIHNLAAWIKENNP--DIICLQE--TKTEDKNFPFETLQS 52 + V T N ++ AR++ ++ I +P DI+ LQE + N +T Sbjct: 16 IRVFTMNCWGLKYIAKHREARLNEVSLRIARASPSFDIVALQEFWVYADYGNLRTKTSSI 75 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTH-----------LPGDDLDVQARFIEATFTI 101 L Y G+ ILSK+ + GD + A Sbjct: 76 LPYGKFYFSGAIGGGLVILSKWPIEQSSMFGYPLNGRPTAFWRGDWYVGKGVACAAVRHP 135 Query: 102 NTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161 + +T+ I N +L + + + + ++ I GD+N+IP Sbjct: 136 SGKTIDIFNTHLHAPYEKNDSYLCHRTAQAWEIAKLLRGAVQKGHIAIGLGDFNMIPSSL 195 Query: 162 DCYNPIIWENDACFT----LEVRQSFQKLQNMGFTDAIRATHDTHHLYSF----WDYYAD 213 + N + L ++ Sbjct: 196 AHRIISTHGLVSDSWLSANPTTPSITPPKTNAKTNIEVLGATCDSVLNTWRMSTPTLPPP 255 Query: 214 SWSKNKGIRIDHIMLSPEATSLLHSARI-DTKPRGWTK-------------PSDHTPVIV 259 KG R+D+I +P S + RI T+P SDH V V Sbjct: 256 ETEDPKGKRLDYIFHAPR-YSSVQDIRIGMTEPMSMPSQKGGKGGAGGYCSLSDHFSVEV 314 Query: 260 SLDIPEPRKKQQDSTSQNMKP 280 +L + P ++QQ++ ++ P Sbjct: 315 TLSL-APNQQQQNALAEARNP 334 >gi|312882993|ref|ZP_07742724.1| putative phospholipase C [Vibrio caribbenthicus ATCC BAA-2122] gi|309369153|gb|EFP96674.1| putative phospholipase C [Vibrio caribbenthicus ATCC BAA-2122] Length = 441 Score = 44.4 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 38/279 (13%), Positives = 76/279 (27%), Gaps = 41/279 (14%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKEN-----NPDIICLQETKTE-DKNFPFETLQSLNY 55 + + V T+N+ ++ ++ +E D++ LQE F E + Y Sbjct: 176 NALKVMTYNIWALPVIAKHIGDRYQEIPKHVKGYDVLALQEVFAAGRGEFLRELAKEYPY 235 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + +K N + + I Sbjct: 236 QTQMLDKKGPNIYDGGVTIVSRYPIVNQTQFVFPDCTGTDCFADKGVNYAEIIK------ 289 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + + + ++ + ++ A NI Y N Sbjct: 290 -GGVAYHVFATHTASYDTSTAREYRQRQFKQMRQLASTLNIPKNEAVIYGGDFNVNK--- 345 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYS--FWDYYADSWSKNKGIR--------IDH 225 + A ++ Y+ +D ++++ IR +D+ Sbjct: 346 ------RKFPGDYQQMLSNLSAIEPSYSGYTESTFDPRVNNFAGK--IREDNGNVEYLDY 397 Query: 226 IMLSPEATSLLHSARIDTKPRG-----WTKP--SDHTPV 257 +M+S E + HS PR W SDH PV Sbjct: 398 VMVSNEYLNKSHSDNRVDVPRSTSEGLWKHFNLSDHFPV 436 >gi|217969785|ref|YP_002355019.1| endonuclease/exonuclease/phosphatase [Thauera sp. MZ1T] gi|217507112|gb|ACK54123.1| Endonuclease/exonuclease/phosphatase [Thauera sp. MZ1T] Length = 301 Score = 44.4 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 8/38 (21%), Positives = 16/38 (42%), Gaps = 4/38 (10%) Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 D ++ + + + + T SDH PV++ L Sbjct: 266 DFFFVTADLAPRVRAVEVLAD----TAASDHQPVVLEL 299 >gi|94991267|ref|YP_599367.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pyogenes MGAS10270] gi|94544775|gb|ABF34823.1| Endonuclease/Exonuclease/phosphatase family protein [Streptococcus pyogenes MGAS10270] Length = 279 Score = 44.4 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 37/276 (13%), Positives = 85/276 (30%), Gaps = 20/276 (7%) Query: 3 VVTVATWNVNSIRAR--IHNLAAW---IKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57 + V T N +S + L A I DIICLQE ++ E L + Sbjct: 8 MTKVLTLNTHSWMQANTLKKLVALAEHILAEKYDIICLQEI---NQLIESELATDLPRYQ 64 Query: 58 E-----TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 + + + + I + + + + E ++ Q + + ++ Sbjct: 65 ALSGTPSIHKDHFALLLIHYLQKRGQHYYWSWASNHIGYDIYQEGVAILSKQPIHVSDIL 124 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLI---FAGDYNIIPQPHDCYNPIIW 169 + T + + + F G++ + + N + Sbjct: 125 VSAMADETDYHTRRSLIAKTTLDGKEVAVVNVHLSWFDKGFLGEWEKLEKELLTLNCPLL 184 Query: 170 ENDACFTLEVRQSFQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227 + +Q + + D+ + +S + +++DH+ Sbjct: 185 LMGDFNNPTDQDGYQVMMGSPLDLQDSHKVADHVFGDHSIVADIDGWQGNKEALKVDHVF 244 Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 S + + S++I + SDH + V+LD Sbjct: 245 TSKDFI--IRSSKITFEGGDAPVVSDHYGLEVTLDW 278 >gi|290959609|ref|YP_003490791.1| hypothetical protein SCAB_52121 [Streptomyces scabiei 87.22] gi|260649135|emb|CBG72249.1| conserved hypothetical protein [Streptomyces scabiei 87.22] Length = 295 Score = 44.4 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 45/280 (16%), Positives = 69/280 (24%), Gaps = 25/280 (8%) Query: 4 VTVATWNVNSIR-----ARIHNLAAWIKENNPDIICLQETK----------TEDKNFPFE 48 + V TWN+ R R + A ++E PD + LQE N Sbjct: 1 MRVVTWNLW-WRFGPWQERQKAILAVLRELRPDAVGLQEVWQRGGGTGRDGGGGDNLAGW 59 Query: 49 TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108 L H + I + + I T Sbjct: 60 LAGELGMHWAWGEYGDAGRWQRRIGDSDVGIGGAVLSRWPVRERDAIALPAGDGGSTRGA 119 Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168 L S Q L + + P Sbjct: 120 LYALLDAPGAPVPFFTAHLSSATDASAVRCRQVTALAGFVARHRGGHAHPSVITGDFNAW 179 Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF---WDYYADSWSKNKGIRIDH 225 ++D ++ + F DA ++ Y A S+ + R+D+ Sbjct: 180 PDSDEVRLFGGYRTAPAVPGQCFFDAWEYAEPGAPSATWDLANPYVAGSFGPSV--RVDY 237 Query: 226 IMLSPEATSLLHSARIDT----KPRGWTKPSDHTPVIVSL 261 I + P L R P G PSDH V+ L Sbjct: 238 IHVGPPGPGGLGHVRAVRRAGEGPVGGVWPSDHLAVVADL 277 >gi|256838624|ref|ZP_05544134.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|256739543|gb|EEU52867.1| conserved hypothetical protein [Parabacteroides sp. D13] Length = 280 Score = 44.4 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 9/39 (23%), Positives = 19/39 (48%), Gaps = 2/39 (5%) Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 RID+I ++ ++ + + PSDH P+++ Sbjct: 241 RIDYIFVTKNI--HVNKYGTLNEFQYGHYPSDHFPIMIE 277 >gi|196015334|ref|XP_002117524.1| hypothetical protein TRIADDRAFT_32656 [Trichoplax adhaerens] gi|190579846|gb|EDV19934.1| hypothetical protein TRIADDRAFT_32656 [Trichoplax adhaerens] Length = 627 Score = 44.4 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 41/294 (13%), Positives = 87/294 (29%), Gaps = 50/294 (17%) Query: 8 TWNVNSIRARIHNLAAWIKENN--PDIICL--QE--------------------TKTEDK 43 TWNVN + +++ W+++ + DII + QE K DK Sbjct: 7 TWNVNG-QLTSEDISEWLRKEDGNSDIIAIGFQELDLSAEALLQLKESSRAEEWVKIVDK 65 Query: 44 NFPFETLQSLNYHIETC---GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT 100 + P + + + N +++ + T + G + + Sbjct: 66 HLPIDMCKVRGIRLVGMLLLVYAKSNLREFITEIHADHVGTGIMGMMGNKGGVAVRFKLH 125 Query: 101 INTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP 160 + T + + H I D K + +SQ L + + ++ + Sbjct: 126 LTTMCF-VNSHLAAHAEEIEKRNQDFKEVSS-KLFSRSSQPLSVLDHETTFWFGDLNYRI 183 Query: 161 HDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY--SF--------WDY 210 + + ++ + Q Q M + + + ++ WD Sbjct: 184 AGNEAIVKDMIKSGLLDDLFKFDQLNQQMSQRKVFQNFIEGPIKFIPTYKYDPGTNNWDT 243 Query: 211 YADSWSKNKGIRIDHIMLSPEATSLLHSA-RIDTKPRGWTKPSDHTPVIVSLDI 263 + RI + +D + K SDH PV S ++ Sbjct: 244 SEKCRAPAWCDRI---------LWKATNVLFVDYRSHPSLKCSDHKPVSASFNV 288 >gi|68476691|ref|XP_717638.1| potential mRNA deadenylase and CCR4-NOT complex subunit Ccr4p [Candida albicans SC5314] gi|68476838|ref|XP_717564.1| potential mRNA deadenylase and CCR4-NOT complex subunit Ccr4p [Candida albicans SC5314] gi|74586169|sp|Q5A761|CCR4_CANAL RecName: Full=Glucose-repressible alcohol dehydrogenase transcriptional effector; AltName: Full=Carbon catabolite repressor protein 4; AltName: Full=Cytoplasmic deadenylase gi|46439279|gb|EAK98599.1| potential mRNA deadenylase and CCR4-NOT complex subunit Ccr4p [Candida albicans SC5314] gi|46439356|gb|EAK98675.1| potential mRNA deadenylase and CCR4-NOT complex subunit Ccr4p [Candida albicans SC5314] Length = 787 Score = 44.4 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 39/301 (12%), Positives = 74/301 (24%), Gaps = 53/301 (17%) Query: 17 RIHNLAAWIKENNPDIICLQE--TKT-EDKNFPFETLQSL-NYHI--------------- 57 R + L + N DI+C+QE TKT ++ P T Y Sbjct: 487 RKNLLEKEVLNYNTDIVCMQEVETKTFQEFWLPVMTANGYKGYFFSKTRSKTMSETDSKK 546 Query: 58 ---------------ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN 102 YN V + S + D A + Sbjct: 547 VDGCATFFKNDKFSLIHKQNFEYNSVCMGSDKYKKTKDLFNRFMNKDNIALISYLQHKES 606 Query: 103 TQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD 162 + + + N +L K ++ + ++ + Sbjct: 607 GEKIAVVNTHLHWDPAFNDVKALQVGILLEELQGIIKKYRHTNSNEDIKNSSIVVCGDFN 666 Query: 163 CYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF-------WDYYADSW 215 ++ G H ++ + ++ Sbjct: 667 SVKDSAVYQLFSTGASKGHEDMNGRDYGKFTEDGFHHPFKLKSAYEAVGELPFTNLTPAF 726 Query: 216 SKNKGIRIDHIMLS-PEATSLLHSARIDTKPRG-------WTKPSDHTPVIVSLDIPEPR 267 + N ID+I S P R+D + PSDH P++ + + + Sbjct: 727 TDN----IDYIWYSTPTLQVKGLLGRVDEEYTSHSIGFPDANFPSDHVPILAKFQLKKGK 782 Query: 268 K 268 K Sbjct: 783 K 783 >gi|118477610|ref|YP_894761.1| hypothetical protein BALH_1938 [Bacillus thuringiensis str. Al Hakam] gi|118416835|gb|ABK85254.1| conserved hypothetical protein [Bacillus thuringiensis str. Al Hakam] Length = 264 Score = 44.4 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 41/278 (14%), Positives = 78/278 (28%), Gaps = 35/278 (12%) Query: 3 VVTVATWNV-N--SI-RARIHNLAAWIKENNPDIICLQETKT-----EDKNFPFETLQSL 53 ++ +AT+N+ N S+ R+ + I+ +P I+ LQE ++ KN + Sbjct: 7 ILRIATFNIWNHESLWFERLEAICEEIRSISPHILALQEVRSSVNLNSKKNVAQYIAGQI 66 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 Y + + L+ I I ++ + E+ + T Sbjct: 67 GYPFCIFKEYPDSPDEGLAFLSKIPI----IAEEAIWETDIEESNYCAIRITFTYKGCKF 122 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 N + K + + + L+ + Y D Sbjct: 123 GVTNVHLNWKSSRIRQEQMNTVNNWIENRASDYELLCGDFNDDPFSMVHQYLIRKHWIDV 182 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 E+ ++ + + D R D IM+ A Sbjct: 183 AQFKEIEENMIAQPTLDYRKNPNLKDDVKQE----------------KRYDWIMIQENAA 226 Query: 234 ---SLLHSARIDTK---PRGWTKPSDHTPVIVSLDIPE 265 + + I + PSDH V V L E Sbjct: 227 FEFPTIENVSIFGESALTSTGMFPSDHYGVFVDLKFNE 264 >gi|47222275|emb|CAG11154.1| unnamed protein product [Tetraodon nigroviridis] Length = 360 Score = 44.4 bits (103), Expect = 0.018, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 9/44 (20%) Query: 2 SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQET 38 +++ TWNV+ + RAR L ++I PD++ LQE Sbjct: 110 RKLSLITWNVDGLDTDNLAERAR--GLCSFIVLYTPDVVFLQEL 151 >gi|307546855|ref|YP_003899334.1| hypothetical protein HELO_4265 [Halomonas elongata DSM 2581] gi|307218879|emb|CBV44149.1| K06896 [Halomonas elongata DSM 2581] Length = 273 Score = 44.4 bits (103), Expect = 0.019, Method: Composition-based stats. Identities = 14/100 (14%), Positives = 30/100 (30%), Gaps = 16/100 (16%) Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 ++ + +L H S+ + +DHI+LS Sbjct: 181 HVVVMGDLNCTPDQLHAHERFRKSLPLHPVRPPLSYPSWQPR-------RALDHILLSDS 233 Query: 232 A-TSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQ 270 + + SDH PV + + +P+ ++ Sbjct: 234 LQADRV---EVLEHL-----FSDHLPVAIDIRVPDACRET 265 >gi|221487002|gb|EEE25248.1| endonuclease/exonuclease/phosphatase domain-containing protein, putative [Toxoplasma gondii GT1] Length = 1347 Score = 44.4 bits (103), Expect = 0.019, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%) Query: 17 RIHNLAAWIKENNPDIICLQETKTED-KNFPFETLQSLNYH 56 R + I +NPD++CLQE ++E ++F L Y+ Sbjct: 864 RRQRILEEILAHNPDVVCLQEVQSEHFEDFFLPELARYGYN 904 >gi|237831705|ref|XP_002365150.1| endonuclease/exonuclease/phosphatase domain-containing protein [Toxoplasma gondii ME49] gi|211962814|gb|EEA98009.1| endonuclease/exonuclease/phosphatase domain-containing protein [Toxoplasma gondii ME49] gi|221506685|gb|EEE32302.1| endonuclease/exonuclease/phosphatase domain-containing protein, putative [Toxoplasma gondii VEG] Length = 1347 Score = 44.4 bits (103), Expect = 0.019, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%) Query: 17 RIHNLAAWIKENNPDIICLQETKTED-KNFPFETLQSLNYH 56 R + I +NPD++CLQE ++E ++F L Y+ Sbjct: 864 RRQRILEEILAHNPDVVCLQEVQSEHFEDFFLPELARYGYN 904 >gi|315918688|ref|ZP_07914928.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. D2] gi|313692563|gb|EFS29398.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. D2] Length = 289 Score = 44.4 bits (103), Expect = 0.019, Method: Composition-based stats. Identities = 32/265 (12%), Positives = 69/265 (26%), Gaps = 25/265 (9%) Query: 4 VTVATWNVN-----SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 + VAT+N+ R +A IK+ + +I +E + + Q + + Sbjct: 45 MRVATYNLQVETGTGWTNRRERVAQLIKDYDFEICGFEE--ASWEQRSYLGTQLASDYQI 102 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + + + LD + T I + N Sbjct: 103 LAYGRDTGNDDNKAGEMSGILYKKSRYTLLDAGRFWFSETPDIPSNGWDETNFKRFCVWG 162 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 K ++ + + + + + N E Sbjct: 163 KFKDSKTQKEFYLFETHMPLADNARKHACQMLVDAVSDKAKDNTPAFCTGDFNATPDAPE 222 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 + + A L++F RID I + Sbjct: 223 IAT-TICQSGILKDAYREAAVQHGALFTFPSKKT---------RIDFIFV--------KH 264 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263 A + + + SDH P+++ ++I Sbjct: 265 ATVLSTRTIVSSLSDHYPMVIVVEI 289 >gi|116200462|ref|XP_001226043.1| hypothetical protein CHGG_10776 [Chaetomium globosum CBS 148.51] gi|88175490|gb|EAQ82958.1| hypothetical protein CHGG_10776 [Chaetomium globosum CBS 148.51] Length = 1241 Score = 44.4 bits (103), Expect = 0.019, Method: Composition-based stats. Identities = 42/273 (15%), Positives = 70/273 (25%), Gaps = 47/273 (17%) Query: 9 WNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGV 68 WN L A ++E D++ +QE + Sbjct: 415 WNTEG---NKQALEALLEEAQYDLMAIQE---------------------PWINQQTKST 450 Query: 69 AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKI 128 + + + V +F + T + GN Sbjct: 451 YCPRGSKYHLVHKASGRAAIFVSRKFDTGQWEYETSEEHCKVWFPGLGNSGLELWSIYNP 510 Query: 129 SWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN 188 K L+ R P++ AGD+N+ D + + +A L ++ Sbjct: 511 LEDKTLLQTLLSRPAPAYPVVLAGDFNLHHPQWDRFGRYERKAEALLELALQWDLDLRTP 570 Query: 189 MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGW 248 G + IDH S + + RG Sbjct: 571 AGTITRAPQGAQRGRTST----------------IDHFWASVGL----QTTYYGLEYRGK 610 Query: 249 TKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 SDH P I+ DI P +Q N K + Sbjct: 611 ---SDHYPQILEADIGGPLPQQTQPGGWNWKMM 640 >gi|116199715|ref|XP_001225669.1| hypothetical protein CHGG_08013 [Chaetomium globosum CBS 148.51] gi|88179292|gb|EAQ86760.1| hypothetical protein CHGG_08013 [Chaetomium globosum CBS 148.51] Length = 1173 Score = 44.4 bits (103), Expect = 0.019, Method: Composition-based stats. Identities = 42/273 (15%), Positives = 70/273 (25%), Gaps = 47/273 (17%) Query: 9 WNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGV 68 WN L A ++E D++ +QE + Sbjct: 429 WNTEG---NKQALEALLEEAQYDLMAIQE---------------------PWINQQTKST 464 Query: 69 AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKI 128 + + + V +F + T + GN Sbjct: 465 YCPRGSKYHLVHKASGRAAIFVSRKFDTGQWEYETSEEHCKVWFPGLGNSGLELWSIYNP 524 Query: 129 SWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN 188 K L+ R P++ AGD+N+ D + + +A L ++ Sbjct: 525 LEDKTLLQTLLSRPAPAYPVVLAGDFNLHHPQWDRFGRYERKAEALLELALQWDLDLRTP 584 Query: 189 MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGW 248 G + IDH S + + RG Sbjct: 585 AGTITRAPQGAQRGRTST----------------IDHFWASVGL----QTTYYGLEYRGK 624 Query: 249 TKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 SDH P I+ DI P +Q N K + Sbjct: 625 ---SDHYPQILEADIGGPLPQQTQPGGWNWKMM 654 >gi|323455298|gb|EGB11167.1| hypothetical protein AURANDRAFT_61968 [Aureococcus anophagefferens] Length = 831 Score = 44.4 bits (103), Expect = 0.019, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 22/57 (38%), Gaps = 7/57 (12%) Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWT-------KPSDHTPVIVSLDIPEPRKKQ 270 ++DH++ +P A ++ PSDH PV +L +P R Sbjct: 639 WKLDHVLCTPALRPAARWASLEADAPSRAAGLPNASWPSDHYPVAAALALPGARGDP 695 >gi|299534838|ref|ZP_07048167.1| endonuclease yhcR precursor [Lysinibacillus fusiformis ZC1] gi|298729683|gb|EFI70229.1| endonuclease yhcR precursor [Lysinibacillus fusiformis ZC1] Length = 1375 Score = 44.4 bits (103), Expect = 0.019, Method: Composition-based stats. Identities = 13/81 (16%), Positives = 31/81 (38%), Gaps = 10/81 (12%) Query: 200 DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT---KPSDHTP 256 ++++ + N + +DHI++S + + I + SDH P Sbjct: 1195 PEQDRFTYF------FQGNNQV-LDHILVSNKLADVTEIDLIHINANFTEAQGRASDHDP 1247 Query: 257 VIVSLDIPEPRKKQQDSTSQN 277 V+V +D+ ++ + Sbjct: 1248 VLVQIDLKADNEEIPTPITPE 1268 >gi|284031870|ref|YP_003381801.1| endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836] gi|283811163|gb|ADB33002.1| Endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836] Length = 264 Score = 44.4 bits (103), Expect = 0.019, Method: Composition-based stats. Identities = 8/35 (22%), Positives = 15/35 (42%), Gaps = 1/35 (2%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQET 38 + + + N A W++ D++CLQE Sbjct: 1 MRIVSVNAWGG-AMFDEFVPWLETVGADVLCLQEV 34 >gi|87116466|dbj|BAE79385.1| unnamed protein product [Ipomoea batatas] Length = 1366 Score = 44.4 bits (103), Expect = 0.019, Method: Composition-based stats. Identities = 34/261 (13%), Positives = 76/261 (29%), Gaps = 39/261 (14%) Query: 4 VTVATWNVNSI-RARIHNLA-AWIKENNPDIICLQETKTE--DKNFPFETLQSLNYHIET 59 + + +WN I +R+ + D +CL E ++ +K + L H Sbjct: 1 MRILSWNCRGIANSRVRRFVKDLLSTTKADALCLLEIRSSKAEKMIALASRLGLTNHFIV 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 G+ +L K V + A I +R Sbjct: 61 NPLGFAGGLLLLWKPALNLSVISHNSQAIHTLASHRLGNCFITFAYIR------------ 108 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + + + + ++ P + GD N I + + + Sbjct: 109 -----PNTFAKCRFWEYCKQLANSIQSPWMVVGDLNDIATSDEQWGSSSLNYTSLQNFVD 163 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM--LSPEATSLLH 237 S L + G + +++ + + + + R+D ++ +S + T Sbjct: 164 AYSDCGLLDPGSSGP---------NFTWCRFIGNRVVQRR--RLDRVLWNVSAQLTFPEA 212 Query: 238 SARIDTKPRGWTKPSDHTPVI 258 + SDH P++ Sbjct: 213 KVSVLP-----RLCSDHNPIL 228 >gi|87116459|dbj|BAE79382.1| unnamed protein product [Ipomoea batatas] Length = 1366 Score = 44.4 bits (103), Expect = 0.019, Method: Composition-based stats. Identities = 34/261 (13%), Positives = 76/261 (29%), Gaps = 39/261 (14%) Query: 4 VTVATWNVNSI-RARIHNLA-AWIKENNPDIICLQETKTE--DKNFPFETLQSLNYHIET 59 + + +WN I +R+ + D +CL E ++ +K + L H Sbjct: 1 MRILSWNCRGIANSRVRRFVKDLLSTTKADALCLLEIRSSKAEKMIALASRLGLTNHFIV 60 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 G+ +L K V + A I +R Sbjct: 61 NPLGFAGGLLLLWKPALNLSVISHNSQAIHTLASHRLGNCFITFAYIR------------ 108 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + + + + ++ P + GD N I + + + Sbjct: 109 -----PNTFAKCRFWEYCKQLANSIQSPWMVVGDLNDIATSDEQWGSSSLNYTSLQNFVD 163 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM--LSPEATSLLH 237 S L + G + +++ + + + + R+D ++ +S + T Sbjct: 164 AYSDCGLLDPGSSGP---------NFTWCRFIGNRVVQRR--RLDRVLWNVSAQLTFPEA 212 Query: 238 SARIDTKPRGWTKPSDHTPVI 258 + SDH P++ Sbjct: 213 KVSVLP-----RLCSDHNPIL 228 >gi|328473848|gb|EGF44678.1| hypothetical protein LM220_01292 [Listeria monocytogenes 220] Length = 23 Score = 44.4 bits (103), Expect = 0.019, Method: Composition-based stats. Identities = 6/17 (35%), Positives = 11/17 (64%) Query: 4 VTVATWNVNSIRARIHN 20 + + +WNVN +RA + Sbjct: 1 MKLISWNVNGLRAAVKK 17 >gi|306825594|ref|ZP_07458933.1| RgfB protein [Streptococcus sp. oral taxon 071 str. 73H25AP] gi|304431955|gb|EFM34932.1| RgfB protein [Streptococcus sp. oral taxon 071 str. 73H25AP] Length = 271 Score = 44.4 bits (103), Expect = 0.019, Method: Composition-based stats. Identities = 32/267 (11%), Positives = 80/267 (29%), Gaps = 20/267 (7%) Query: 4 VTVATWNVNSI--RARIHNLAAWIKEN---NPDIICLQETKTEDKNFPFETLQSLNY--- 55 + T N +S + +++ + D+IC QE + E + +Y Sbjct: 1 MKFLTLNTHSWMEKEAEEKFQLLLQDILDKDYDLICFQEI--NQEMTSPEVEVNNHYQAL 58 Query: 56 ------HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 H + + +A K + G D + I + I + + + Sbjct: 59 PSAEPIHQDHYVRLLVEKLAEKGKNYYWTWAYNHIGYDRYHEGVAILSKTPIKAREILVS 118 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG-DYNIIPQPHDCYNPII 168 ++ P + K + ++ + + + + + Sbjct: 119 DVDDPTDYHTRRVVLTETEVEGKELAVASVHLSWWDKGFQEEWARFEAVLKELNKPLILA 178 Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 + + E Q+ +G DA+ + Y+ + +RID++ Sbjct: 179 GDFNNPAGQEGYQAILASP-LGLQDALEVAKERSGSYTVPPEIDGWKGNTEPLRIDYVFT 237 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHT 255 + + + S + + + SDH Sbjct: 238 TKDLE--VESLHVVFDGQNGPQVSDHY 262 >gi|209518265|ref|ZP_03267091.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. H160] gi|209501285|gb|EEA01315.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. H160] Length = 290 Score = 44.4 bits (103), Expect = 0.019, Method: Composition-based stats. Identities = 9/38 (23%), Positives = 19/38 (50%), Gaps = 4/38 (10%) Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 D + ++ + ++ + S +D R SDH P+ + L Sbjct: 256 DFVFVTQDLSTRVASCEVDPHSRS----SDHQPMWLEL 289 >gi|330993334|ref|ZP_08317269.1| endonuclease/exonuclease/phosphatase [Gluconacetobacter sp. SXCC-1] gi|329759364|gb|EGG75873.1| endonuclease/exonuclease/phosphatase [Gluconacetobacter sp. SXCC-1] Length = 283 Score = 44.4 bits (103), Expect = 0.020, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 6/48 (12%) Query: 223 IDHIMLSPEATSLLH----SARIDTKPRGWT--KPSDHTPVIVSLDIP 264 IDHI++ A + + + + G + SDH PV V+L +P Sbjct: 236 IDHILVGGPAYARVRPDSLRVMLYHEDSGTEASRLSDHCPVSVNLSLP 283 >gi|319946436|ref|ZP_08020673.1| RgfB protein [Streptococcus australis ATCC 700641] gi|319747404|gb|EFV99660.1| RgfB protein [Streptococcus australis ATCC 700641] Length = 271 Score = 44.4 bits (103), Expect = 0.020, Method: Composition-based stats. Identities = 35/278 (12%), Positives = 66/278 (23%), Gaps = 24/278 (8%) Query: 4 VTVATWNVNSIRARIH-----NLAAWIK---ENNPDIICLQETK---------TEDKNFP 46 + T N +S + +K E D+IC QE D P Sbjct: 1 MKFLTLNTHS---WMEENPQQKFEDLLKDILEKQYDLICFQEINQAIESPVVPVNDLYHP 57 Query: 47 FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 + + ++ LS + G D + I + I L Sbjct: 58 TPSAEPIHQDHYVRCLVEKLEEEGLS--YHWTWAYNHIGYDRYHEGVAILSRTPIQASEL 115 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 + + P + K + ++ Sbjct: 116 LVSDANDPTDYHTRRIAIAETQVDGKEIAVASVHLSWWDKGFQQEWARLEERFSQLQKPL 175 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226 I+ + + + D+ T Y+ +RID++ Sbjct: 176 ILAGDFNNPAGQEGYEAILASPLALQDSFIEARQTKGTYTVGPGIDGWDDNQVPLRIDYV 235 Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 S E + + SDH + L +P Sbjct: 236 FTSKEWV--IERLEVVFDGSSQPLVSDHYGLSADLYLP 271 >gi|260462359|ref|ZP_05810567.1| Endonuclease/exonuclease/phosphatase [Mesorhizobium opportunistum WSM2075] gi|259031853|gb|EEW33121.1| Endonuclease/exonuclease/phosphatase [Mesorhizobium opportunistum WSM2075] Length = 336 Score = 44.4 bits (103), Expect = 0.020, Method: Composition-based stats. Identities = 42/260 (16%), Positives = 68/260 (26%), Gaps = 44/260 (16%) Query: 19 HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIE 78 + + I NPD+I L E + + Y I GVA+LS+ Sbjct: 110 KKVLSLIGRTNPDVITLDEVSAMWETELGYITSAYPYRILCPYPNGVFGVALLSRRPF-- 167 Query: 79 IVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFA 138 A E + T+ G + S + + +W L + Sbjct: 168 ---------AADSAPHCEPRGAMAIATVDFGGTAVNVAAIHLSWPWPREQNWQIGELSNS 218 Query: 139 SQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT 198 L E I AGD N +P Sbjct: 219 ISSL--GETAIMAGDCNAVPWSAAVRRVASLGGLTVMPSAGPTWLYIKLPDVL------- 269 Query: 199 HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVI 258 + G+ ID + S + + R SDH PV+ Sbjct: 270 -----------------RRFAGLPIDQVF-SKG------GVTVHSATRLEDTGSDHLPVL 305 Query: 259 VSLDIPEPRKKQQDSTSQNM 278 V + K+ +D + + Sbjct: 306 VEFSVRSAEKQPEDRHATAL 325 >gi|323490963|ref|ZP_08096158.1| endonuclease yhcR [Planococcus donghaensis MPA1U2] gi|323395443|gb|EGA88294.1| endonuclease yhcR [Planococcus donghaensis MPA1U2] Length = 1164 Score = 44.4 bits (103), Expect = 0.020, Method: Composition-based stats. Identities = 11/82 (13%), Positives = 29/82 (35%), Gaps = 10/82 (12%) Query: 200 DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT---KPSDHTP 256 YS++ Y +S +DH++++ + + SDH P Sbjct: 926 PLEDRYSYY-YQGNSQV------LDHLLVTNNLAQRTELDMVHINAMFMEEHGRASDHDP 978 Query: 257 VIVSLDIPEPRKKQQDSTSQNM 278 ++ + +P + + ++ Sbjct: 979 LLAQISFEKPAVPGEQTAKPDL 1000 >gi|260173205|ref|ZP_05759617.1| hypothetical protein BacD2_15145 [Bacteroides sp. D2] gi|315921479|ref|ZP_07917719.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313695354|gb|EFS32189.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 608 Score = 44.4 bits (103), Expect = 0.020, Method: Composition-based stats. Identities = 34/278 (12%), Positives = 74/278 (26%), Gaps = 58/278 (20%) Query: 3 VVTVATWNV---NSIRARIH------NLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + T+N+ N + +A I +PD++ +QE Sbjct: 22 TLRLMTYNIKNANG----MDDICNFQRVANVINNASPDVVAIQEV--------------- 62 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 T + +++ + + T + LR+ + L Sbjct: 63 --DSMTRRSGQKYVLGEIAERTQMHACFAPAIKFDGGKYGIGLLTKQVP---LRLQAIPL 117 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 P + +I + + + L + + + Sbjct: 118 PGREEARILILAEFEDYIYCCTHLSLTEEDRMKSLEIVKSFTASYKKPLFLAGDMNAEPE 177 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI--MLSPE 231 ++ Q ++ + A ID+I + S Sbjct: 178 SDFIKELQKDFQILSNPKQSTYPAPDPKET-------------------IDYITALKSNA 218 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKK 269 L S+++ +P SDH P++V L E K Sbjct: 219 NGFALISSQVLDEPM----ASDHRPILVELRTAEKADK 252 >gi|29654239|ref|NP_819931.1| endonuclease/exonuclease/phosphatase family protein [Coxiella burnetii RSA 493] gi|29541505|gb|AAO90445.1| endonuclease/exonuclease/phosphatase family protein [Coxiella burnetii RSA 493] Length = 255 Score = 44.4 bits (103), Expect = 0.020, Method: Composition-based stats. Identities = 34/265 (12%), Positives = 65/265 (24%), Gaps = 28/265 (10%) Query: 5 TVATWNVN-SIRARIHNLA-----AWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 TV ++N++ AR ++ + DI+ LQE + + + Sbjct: 12 TVLSYNIHKGFSARYRRFVLPDIREALRAIDADIVLLQEVQGKHHKSRLKKFA------- 64 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 SK+ + + + + + +L Sbjct: 65 -HADLPQTEFIAESKWPHYMYGKNAVYGSAHHGNALLSNFPFKMVENINV-SLSQRASRS 122 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 I D + + + E I + P+I D Sbjct: 123 ILHAIIDYEPTVELHVICIHLGLFRAERDYQLITLSKRIEAHVPSHAPLIIAGDFNDWRR 182 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 ++ + + Y S + RI + L S Sbjct: 183 GAFNYMEKELELKEVYKVLEGKHAKTY------PASRPTLEVDRIYY----RGL--KLLS 230 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263 I + W K SDH P+ I Sbjct: 231 GEIFNESY-WKKLSDHLPLHAKFAI 254 >gi|325105102|ref|YP_004274756.1| Endonuclease/exonuclease/phosphatase [Pedobacter saltans DSM 12145] gi|324973950|gb|ADY52934.1| Endonuclease/exonuclease/phosphatase [Pedobacter saltans DSM 12145] Length = 278 Score = 44.4 bits (103), Expect = 0.020, Method: Composition-based stats. Identities = 43/278 (15%), Positives = 76/278 (27%), Gaps = 59/278 (21%) Query: 3 VVTVATWNVN---------SIRARIHNLAAWIKENNPDIICLQET--KTEDKNFPFETLQ 51 V ++N++ S R + +A I PD++ L E KT+ + + Sbjct: 42 TFKVMSYNIHIGNPPSKDASYRD-LEAIAQVINIQKPDLVALSEVDNKTKRSGTTVDQAK 100 Query: 52 SLN-----YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 L Y+ T G A + Sbjct: 101 ELGRLTGMYYYFTKAMDYQGG------------EYGDAVLSKFPIAESKRYELPVTGTGF 148 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 +L L Y + + ++ L+ + N +N Sbjct: 149 EPRSLALILVEKEGHKFY-FGSTHLDHTSAEDNRVLQANTLVDIIKSLNYPLVLAGDWN- 206 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR-IDH 225 + Q + T Y+ + NK R ID+ Sbjct: 207 ---------------ALPTSQTINILKKALNPTCTDCPYT--------FPMNKPDRTIDY 243 Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 IM P + S ++ + T SDH P++V L+I Sbjct: 244 IMYKPAEKFKVKSLKVVNE----TYASDHLPLVVDLEI 277 >gi|145226094|ref|YP_001136748.1| endonuclease/exonuclease/phosphatase [Mycobacterium gilvum PYR-GCK] gi|145218557|gb|ABP47960.1| Endonuclease/exonuclease/phosphatase [Mycobacterium gilvum PYR-GCK] Length = 399 Score = 44.4 bits (103), Expect = 0.020, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 20/58 (34%), Gaps = 18/58 (31%) Query: 223 IDHIMLSPEATSLLHSARIDTK-------PRGWTK-----------PSDHTPVIVSLD 262 ID+I+LSP + + + I R K SDH + L+ Sbjct: 341 IDYILLSPALSERVVAGGIIRSGMWRGPRVRKPWKMYDTLTAEQHAASDHALIWADLE 398 >gi|16263840|ref|NP_436632.1| hypothetical protein SM_b20092 [Sinorhizobium meliloti 1021] gi|15139964|emb|CAC48492.1| CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti 1021] Length = 252 Score = 44.4 bits (103), Expect = 0.020, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 21/43 (48%), Gaps = 3/43 (6%) Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +RIDH+++ + S R+ SDH P++ LD+ Sbjct: 208 LRIDHVLVGKGIE--VASCRVHGSTLAR-SASDHLPLLAELDV 247 Score = 40.5 bits (93), Expect = 0.26, Method: Composition-based stats. Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 5/40 (12%) Query: 4 VTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQET 38 + T+NV+S R +AA I E PD+I LQE Sbjct: 12 IRFLTYNVHSCFGTDRRLDPARIAAVIAECQPDVIALQEV 51 >gi|295085529|emb|CBK67052.1| Metal-dependent hydrolase [Bacteroides xylanisolvens XB1A] Length = 611 Score = 44.4 bits (103), Expect = 0.020, Method: Composition-based stats. Identities = 35/278 (12%), Positives = 76/278 (27%), Gaps = 58/278 (20%) Query: 3 VVTVATWNV---NSIRARIH------NLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + T+N+ N + +A I +PD++ +QE Sbjct: 25 TLRLMTYNIKNANG----MDDICSFQRVANVINNASPDVVAIQEV--------------- 65 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 T + +++ + + + T + LR+ + L Sbjct: 66 --DSMTRRSGQKYVLGEIAERTQMHACFAPAIEFEGGKYGIGLLTKQVP---LRLQTIPL 120 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 P + + +I + + + L + + Sbjct: 121 PGREEARTLILAEFEDYIYCCTHLSLAEEDRMKSLEIVKSLIASYKKPLFLAGDMNAEPE 180 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 ++ Q ++ + A ID+I S + Sbjct: 181 SDFIKELQKDFQILSNPEKHTYPAPDPKET-------------------IDYIAASKQNA 221 Query: 234 S--LLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKK 269 + + SAR+ +P SDH P++V L E K Sbjct: 222 TGFAVISARVVNEPM----ASDHRPILVELRTAEKTDK 255 >gi|294625453|ref|ZP_06704084.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294664696|ref|ZP_06730028.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292600276|gb|EFF44382.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292605521|gb|EFF48840.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 299 Score = 44.4 bits (103), Expect = 0.020, Method: Composition-based stats. Identities = 37/274 (13%), Positives = 70/274 (25%), Gaps = 27/274 (9%) Query: 4 VTVATWNVNSIR----ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 +T+ T N++ R AR ++A +K PD+I LQE E + Sbjct: 47 MTLVTLNLHHDREDWPARRAHIAKELKRLAPDVIALQEV--------IERRGGVENQAAW 98 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 +K S + + R+ + Sbjct: 99 LARKLGYDYTFASVDPVGAPKRYGNALLSRRRVLATHQRLLQPLDDYRVAAHLQVDVDGQ 158 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 Y ++ + ++ + L F + + + Sbjct: 159 PVNVYVTHLNERADARGTGIRTRQVADLLDFIASNSAQAPVVIAGDFNTAADTLDLQALR 218 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 R ++ + H++ ++ RIDH+ L A Sbjct: 219 RGYGDSYGSVHRNSDATVSTLNMHVF------------DRPARIDHVFFQQN-RLLAREA 265 Query: 240 RIDTKPRGWTK--PSDHTPVIVSLDIPEPRKKQQ 271 RI SDH V V L + + Sbjct: 266 RILFDTPYAEGRWASDHYGVWVRLQLAPQAQSAP 299 >gi|157151235|ref|YP_001449822.1| RgfB [Streptococcus gordonii str. Challis substr. CH1] gi|157076029|gb|ABV10712.1| RgfB [Streptococcus gordonii str. Challis substr. CH1] Length = 271 Score = 44.4 bits (103), Expect = 0.020, Method: Composition-based stats. Identities = 31/252 (12%), Positives = 70/252 (27%), Gaps = 13/252 (5%) Query: 18 IHNLAAWIKENNPDIICLQETK--TEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75 ++ LA I + D+ICLQE E + Q + + + Sbjct: 21 LNQLAERILQEKYDVICLQEVNQLMESEQVVQAPFYQAVEGAIAIHQDHFALCLVKKLAE 80 Query: 76 PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKR-- 133 + + E ++ L + + N + Sbjct: 81 AGLDYHWSWAYNHIGFDIYNEGVTILSKNPLTPKEVLVSEVNDPRDYHTRKVLLAETEVE 140 Query: 134 -FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192 L + F G+++ + + + + +Q + + Sbjct: 141 GQLMTIASCHLSWWGKGFQGEWSKLEEELLKVKTPLVLMGDFNNPVDYEGYQHI--LKSP 198 Query: 193 DAIRATHDTHHLYSFWDYYADS---WSKNK-GIRIDHIMLSPEATSLLHSARIDTKPRGW 248 ++ +H S + W N+ ++ID+I S + S+ + + Sbjct: 199 LKLQDSHKVAQKISGQATVEGAIAGWDGNQDALKIDYIFTSQGI--QIESSAVVFDGKET 256 Query: 249 TKPSDHTPVIVS 260 SDH + V Sbjct: 257 PVVSDHFGLEVE 268 >gi|119196745|ref|XP_001248976.1| hypothetical protein CIMG_02747 [Coccidioides immitis RS] Length = 2000 Score = 44.0 bits (102), Expect = 0.021, Method: Composition-based stats. Identities = 32/238 (13%), Positives = 69/238 (28%), Gaps = 39/238 (16%) Query: 28 NNPDIICLQETKTEDKNFP-FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGD 86 + DI+ +QE P + +YH + ++ PG Sbjct: 645 LDYDILAIQE--------PWRNPFIATSYHPLKTHFQLMYLADAATRVCMYVSKRIDPGT 696 Query: 87 DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK-YDDKISWIKRFLRFASQRLELE 145 I+ + + G ++ Y++ + L A + L+ + Sbjct: 697 WSVSY---------ISKDIISLEIFNPHSGRKVSIFNVYNEVGTDTLSTLAGAIRALDSQ 747 Query: 146 EPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY 205 E ++ GD+N+ + + + L + T Y Sbjct: 748 EEIVVLGDFNLHHPLWSATHRRANN--------TPNAQELLSVIEEFQLQLLTEPGTPTY 799 Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + D + ID S + + +ID + SDH P+ ++ + Sbjct: 800 RWKDGEST---------IDLTFASEDVAGCVIRCKIDREV---DCDSDHLPIAIAFEW 845 >gi|322703506|gb|EFY95114.1| exonuclease III [Metarhizium anisopliae ARSEF 23] Length = 654 Score = 44.0 bits (102), Expect = 0.021, Method: Composition-based stats. Identities = 27/261 (10%), Positives = 57/261 (21%), Gaps = 29/261 (11%) Query: 22 AAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81 +I DI+ LQE +++ + Q G+ Sbjct: 343 VRFITNARADIVGLQE---STGGHAIRLAKAMGWDY---WQGDDVGIISRYPMVEQYAPI 396 Query: 82 HLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQR 141 G R E F Y + ++ + +R + + Sbjct: 397 ERCGAVRIALDRGQEINFWNCHLGYTPYGPYDFCFDHLSPEEVLKNEIKSRRTPQIINIM 456 Query: 142 LELEEP---------LIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192 +++ + + F + + Sbjct: 457 KHMQDHLSQSSKTPVIFTGDFNAPSHLDWTNATKKLHCGQGYFPWPTSKHPIDAGLIDSF 516 Query: 193 DAIRATHDTHHLYSFW----DYYADSWSKNKGIRIDHIMLSPEATSLLHSARI------D 242 + + ++ D + K+ RID I + A + Sbjct: 517 REVHSDPLVQPGLTWSPIYLDNGGRTEPKD---RIDFIY-HKGLKTHSSEAVVVGQPKAQ 572 Query: 243 TKPRGWTKPSDHTPVIVSLDI 263 PSDH V + Sbjct: 573 PDHYHNEWPSDHAAVKTVFKV 593 >gi|291222530|ref|XP_002731269.1| PREDICTED: phosphatidylinositol polyphosphate 5-phosphatase-like [Saccoglossus kowalevskii] Length = 488 Score = 44.0 bits (102), Expect = 0.021, Method: Composition-based stats. Identities = 41/291 (14%), Positives = 73/291 (25%), Gaps = 46/291 (15%) Query: 6 VATWNVNSIRARIHNLAAWIK--ENNPDI--ICLQETKTEDKNF-----PFET------L 50 + TWNVN ++ +L W+ PDI + QE + F P E Sbjct: 74 IGTWNVNG-KSCAEDLGPWLACDAEPPDIYAVGFQELDLSKEAFLFNDSPREEEWLRGVY 132 Query: 51 QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR---FIEATFTINTQTLR 107 ++L+ K V ++ + D NT + Sbjct: 133 KALHPRANYKKIKLIRLVGMMLIVFAKHELASYITDVAAETGNKGGVGVRLVFHNTTFVF 192 Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG-------DYNIIPQP 160 I + H D + + L + + + Sbjct: 193 INSHLAAHVEEYERRNQDYNDICSRMLFKDFGSPLHISQHDAIFWLGDLNYRISELSADE 252 Query: 161 HDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY-----SFWD---YYA 212 + D ++ + + + + Y S+ A Sbjct: 253 VKGFIRKDMLRDVYEYDQLNRQMRIQKAFIGFTEGEINFLPTYKYDSGTDSWDSSEKNRA 312 Query: 213 DSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +W D I+ E+ L K SDH PV D+ Sbjct: 313 PAW-------CDRILYRGESIRQLK----YRGHMAL-KISDHKPVSSIFDV 351 >gi|84997700|ref|XP_953571.1| sphingomyelinase, [Theileria annulata] gi|65304568|emb|CAI72893.1| sphingomyelinase,, putative [Theileria annulata] Length = 574 Score = 44.0 bits (102), Expect = 0.021, Method: Composition-based stats. Identities = 28/216 (12%), Positives = 55/216 (25%), Gaps = 20/216 (9%) Query: 6 VATWNV-----------N-SIRARI--HNLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51 + ++NV N IR+RI L + + + D++ LQE F Sbjct: 209 IMSYNVQCIPWYLVPGYNIGIRSRILPKYLVEIVNKYSIDVLILQEC------FDKNIFN 262 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 S + S N + +++ ++ ++ + IN L N Sbjct: 263 SFKNSLYHLLPFSTNLIGCKNEWDSTMNNSNRWLILINGGVCILSRYPIINRHQLIFKNC 322 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 KR + + P F + N Sbjct: 323 RNTCSLASKGACLAVINKGNKRINIIGTHLQAYDGPSKFIRQQQFNEIIQWLMTLDVNIN 382 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF 207 D + F + + ++F Sbjct: 383 DPYILAGDLNTCCLTDTSEFNTMLSNENFIKFTHTF 418 >gi|16759734|ref|NP_455351.1| hypothetical protein STY0848 [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29142493|ref|NP_805835.1| hypothetical protein t2075 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213161219|ref|ZP_03346929.1| hypothetical protein Salmoneentericaenterica_14750 [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213586700|ref|ZP_03368526.1| hypothetical protein SentesTyph_37640 [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213647750|ref|ZP_03377803.1| hypothetical protein SentesTy_10972 [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213855118|ref|ZP_03383358.1| hypothetical protein SentesT_13982 [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|289825286|ref|ZP_06544565.1| hypothetical protein Salmonellentericaenterica_07871 [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25353375|pir||AB0599 conserved hypothetical protein ybhP [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16502027|emb|CAD05260.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29138124|gb|AAO69695.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 252 Score = 44.0 bits (102), Expect = 0.021, Method: Composition-based stats. Identities = 30/257 (11%), Positives = 59/257 (22%), Gaps = 39/257 (15%) Query: 15 RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN--YHIETCGQKSYNGVAILS 72 R + L ++ DI+CLQE +++ H E ++ A Sbjct: 27 RFILPELRDAVRTVGADIVCLQEV-MGAHEVHPLHIENWPDTTHYEFLADTMWSDFAYGR 85 Query: 73 KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIK 132 E + ++ R IT + I + Sbjct: 86 NAVYPEGHHGNAVLSRYPIEHYENRGVSVGGSEKRGVLYC-----RITPPMLNRPIHVMC 140 Query: 133 RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192 L + + ++ + + + + + Sbjct: 141 VHLGLRESHRQAQLTMLAGWVNALPESEPVLVAGDFNDWRQKAGPPLNAAGLEEIFTRAH 200 Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML------SPEATSLLHSARIDTKPR 246 T +R+D I + SP A R Sbjct: 201 GRPARTFPVSMPL---------------LRLDRIYVKNANASSPGALP----------LR 235 Query: 247 GWTKPSDHTPVIVSLDI 263 W SDH P+ + + Sbjct: 236 NWRHLSDHAPLSAEIHL 252 >gi|302792621|ref|XP_002978076.1| hypothetical protein SELMODRAFT_418021 [Selaginella moellendorffii] gi|300154097|gb|EFJ20733.1| hypothetical protein SELMODRAFT_418021 [Selaginella moellendorffii] Length = 355 Score = 44.0 bits (102), Expect = 0.021, Method: Composition-based stats. Identities = 40/303 (13%), Positives = 76/303 (25%), Gaps = 67/303 (22%) Query: 16 ARIHNLAAWIKENNPDIICLQETKTED-KNFPFETLQSLNYHIETCGQKSYNGVAILSKY 74 R + + + + D++CLQE ++ ++F L+S Y + Y Sbjct: 66 TRSEQVLSRLLSLDADLLCLQE--LDEFESFYKPLLESKGYSSIYIQRSGNRRDGCGIIY 123 Query: 75 QPIEIVTHLPGDDLDVQARFIEAT--------------------------FTINTQTLRI 108 +P E T R Sbjct: 124 KPERCQLLKQQFLDYNDIAPDETTAGRASESVEEENDRDVSDPRVRFRRNCVGILSAFRF 183 Query: 109 GNLYLPHGNPITSTKYD-------------DKISWIKRFLRFASQRLELEEPLIFAGDYN 155 + + Y ++ + +F + SQ ++ AGD+N Sbjct: 184 NHAPSNIVVIANTHLYWDPALQDVKLAQAKYLLAKLSQFEKEISQEFNSNPVVLVAGDFN 243 Query: 156 IIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY---------S 206 P ++ +E+ LY + Sbjct: 244 STPGDRVYNYITSGRRNSGPDVELSSFKVP----DLESLKVPAIPLDSLYAAVQGEPALT 299 Query: 207 FWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA-----RIDTKPRGWTKPSDHTPVIVSL 261 W KG +D+I SP A+ + ++ PSDH P+ Sbjct: 300 NWS------PNFKGT-LDYIFFSPSASMRPKTILEVPPDVEEGLPNHFHPSDHLPIGADF 352 Query: 262 DIP 264 + Sbjct: 353 SLS 355 >gi|299145528|ref|ZP_07038596.1| putative endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_23] gi|298516019|gb|EFI39900.1| putative endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_23] Length = 289 Score = 44.0 bits (102), Expect = 0.021, Method: Composition-based stats. Identities = 32/265 (12%), Positives = 69/265 (26%), Gaps = 25/265 (9%) Query: 4 VTVATWNVN-----SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 + VAT+N+ R +A IK+ + +I +E + + Q + + Sbjct: 45 MRVATYNLQVETGTGWTNRRERVAQLIKDYDFEICGFEE--ASWEQRSYLGTQLASDYQI 102 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + + + LD + T I + N Sbjct: 103 LAYGRDTGNDDNKAGEMSGILYKKSRYTLLDAGRFWFSGTPDIPSNGWDETNFKRFCVWG 162 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 K ++ + + + + + N E Sbjct: 163 KFKDSKTQKEFYLFETHMPLADNARKHACQMLVDAVSDKAKDNTPAFCTGDFNATPDAPE 222 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 + + A L++F RID I + Sbjct: 223 IAT-TICQSGILKDAYREAAVQHGALFTFPSKKT---------RIDFIFV--------KH 264 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263 A + + + SDH P+++ ++I Sbjct: 265 ATVLSTRTIVSSLSDHYPMVIVVEI 289 >gi|328724145|ref|XP_003248042.1| PREDICTED: hypothetical protein LOC100575610 [Acyrthosiphon pisum] Length = 512 Score = 44.0 bits (102), Expect = 0.021, Method: Composition-based stats. Identities = 39/262 (14%), Positives = 73/262 (27%), Gaps = 41/262 (15%) Query: 5 TVATWNVNSI-RA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + TWNV S+ R NL + + +QE + Sbjct: 27 KIVTWNVTSLYRTDASQNLVDVLNTYIIKVAAIQEIR----------------------- 63 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP---HGNPI 119 G + KY E + + + T + + I N + P + + Sbjct: 64 WLGVGQLTIGKYTSTEFFSGMENTHHFGNGFAVHRTLVPYIKDICIINGHAPTEIKDDNV 123 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + YD+ + + + + + P ++ + Sbjct: 124 KDSFYDELTETYEDITGNMIRIVIGDFNAKCGREPQYFPCIGKESLHCNSNDNGQRLIA- 182 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 N + H H ++ D + N+ IDHI++ S +H Sbjct: 183 ----FATSNGLTVSSTTFPHKNIHKATWKS--PDGETLNQ---IDHILIQNRYRSTIHDV 233 Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261 RG +DH VI L Sbjct: 234 ---RSHRGADCDTDHYLVIAKL 252 >gi|161830200|ref|YP_001596787.1| endonuclease/exonuclease/phosphatase family protein [Coxiella burnetii RSA 331] gi|161762067|gb|ABX77709.1| endonuclease/exonuclease/phosphatase family protein [Coxiella burnetii RSA 331] Length = 255 Score = 44.0 bits (102), Expect = 0.021, Method: Composition-based stats. Identities = 34/265 (12%), Positives = 65/265 (24%), Gaps = 28/265 (10%) Query: 5 TVATWNVN-SIRARIHNLA-----AWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 TV ++N++ AR ++ + DI+ LQE + + + Sbjct: 12 TVLSYNIHKGFSARYRRFVLPDIREALRAIDADIVLLQEVQGKHHKSRLKKFA------- 64 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 SK+ + + + + + +L Sbjct: 65 -HADLPQTEFIAESKWPHYMYGRNAVYGSAHHGNALLSNFPFKMVENINV-SLSQRASRS 122 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 I D + + + E I + P+I D Sbjct: 123 ILHAIIDYEPTVELHVICIHLGLFRAERDYQLITLSKRIEAHVPSHAPLIIAGDFNDWRR 182 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 ++ + + Y S + RI + L S Sbjct: 183 GAFNYMEKELELKEVYKVLEGKHAKTY------PASRPTLEVDRIYY----RGL--KLLS 230 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263 I + W K SDH P+ I Sbjct: 231 GEIFNENY-WKKLSDHLPLHAKFAI 254 >gi|325186273|emb|CCA20779.1| conserved hypothetical protein [Albugo laibachii Nc14] Length = 279 Score = 44.0 bits (102), Expect = 0.021, Method: Composition-based stats. Identities = 34/271 (12%), Positives = 71/271 (26%), Gaps = 39/271 (14%) Query: 6 VATWNVNSIRA---------RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56 V ++NV + A R L +I+ NPD I QE + F F Sbjct: 22 VISYNVRTSNAPDVSYPWTDRKQQLQPFIEAENPDFIGTQE--ASPEQFEF--------- 70 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 Q++ ++ E + + ++ + F +R N + Sbjct: 71 ----FQQALGDTYGITGECAGECYENERPFLMYKKSEWNSLEFGSFALEIRGSNTWNLEY 126 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFA------GDYNIIPQPHDCYNPIIWE 170 S + S F + + L + + Sbjct: 127 KRSVSWQRFQHKSNSISICLFNTHFDMTKGHLESSKLIVQERSKICKSFDFFILTGDLNA 186 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230 N + + + + T +++ + + D+I + P Sbjct: 187 NLQDDAIHYLKGIPLISTLQQCGYQGGTFIGPGVFTG-PLSSAVF--------DYIFIQP 237 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + + I R +DH V + Sbjct: 238 NENIRIIGSSIIDSRRNGQAITDHAIVKTTF 268 >gi|302808881|ref|XP_002986134.1| hypothetical protein SELMODRAFT_425108 [Selaginella moellendorffii] gi|300145993|gb|EFJ12665.1| hypothetical protein SELMODRAFT_425108 [Selaginella moellendorffii] Length = 852 Score = 44.0 bits (102), Expect = 0.021, Method: Composition-based stats. Identities = 12/56 (21%), Positives = 23/56 (41%), Gaps = 12/56 (21%) Query: 1 MSVVTVATWNVNSI----------RARIHNLAAWIKEN--NPDIICLQETKTEDKN 44 M+ ++V +WNV I +AR+ ++ D C QE + ++ Sbjct: 608 MTDLSVLSWNVGGISKDGVLWNDKKARLRQYLRQLEGVIGKCDFFCFQEQRMQEHQ 663 Score = 39.0 bits (89), Expect = 0.75, Method: Composition-based stats. Identities = 29/182 (15%), Positives = 53/182 (29%), Gaps = 19/182 (10%) Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 R+ I + + + + + + I AGD+N H+ Sbjct: 634 RLRQYLRQLEGVIGKCDFFCFQEQRMQEHQTIFKFSQGIDDWILAGDFNF--MDHEEDKR 691 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATH--DTHHLYSFWDYYADSWSKNKGIRID 224 D C +E L +G DA +++ + R+D Sbjct: 692 GGIIQDRCTRVECLAWNSFLLQIGTCDAYEIPGFVTHEPRFTWRERQHRGLQ----CRLD 747 Query: 225 HIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQ------DSTSQNM 278 L+ + ID SDH P+ ++ +P R + +S Sbjct: 748 RFYLTMDLCMQGGKLDIDNTYTD---FSDHHPIRLT--LPFRRSRGPRSQLPYPRSSLRS 802 Query: 279 KP 280 KP Sbjct: 803 KP 804 >gi|25027653|ref|NP_737707.1| hypothetical protein CE1097 [Corynebacterium efficiens YS-314] gi|259506945|ref|ZP_05749845.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] gi|23492935|dbj|BAC17907.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] gi|259165483|gb|EEW50037.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] Length = 292 Score = 44.0 bits (102), Expect = 0.021, Method: Composition-based stats. Identities = 36/266 (13%), Positives = 63/266 (23%), Gaps = 36/266 (13%) Query: 6 VATWNVNSIRARIHN---------------LAAWIKENNPDIICLQETKTEDKN--FPFE 48 V TWN IR RI + + + P I+ +QE + F + Sbjct: 25 VMTWN---IRRRIPGQLTHRADRWATRAPLIREALSQLRPTILGVQE--ALPEQTAFLQQ 79 Query: 49 TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108 L H + + + L + E +++ L Sbjct: 80 VLGPS--HRFVGWGRGRHHTGEATPVFYDTTQLELIDWRQQALSDTPEVPGSVSWGNLFP 137 Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168 + + L S+ + N Sbjct: 138 RAFVAATFRHRATGTRFLVFNTHLDPLSRRSRLRSARAIRDHIRTTQLPAVVTGDVNAHQ 197 Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 +F +Y A + G RID I+ Sbjct: 198 NSATFRAFTSGNVLTDTWSVAAGHLTAEWG-------TFPNYRA---PRPGGKRIDWILS 247 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDH 254 +P+ +H A I+ + SDH Sbjct: 248 TPDW--QVHRAGINARQYAGAWASDH 271 >gi|300939825|ref|ZP_07154463.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 21-1] gi|300455357|gb|EFK18850.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 21-1] Length = 253 Score = 44.0 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 34/267 (12%), Positives = 65/267 (24%), Gaps = 32/267 (11%) Query: 5 TVATWNVN-SI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN--YH 56 V T N++ R + L ++ + DI+CLQE +++ H Sbjct: 11 KVLTINIHKGFTAFNRRFILPELRDAVRSVSADIVCLQEV-MGAHEVHPLHVENWPDTSH 69 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 E ++ A E + +++ R Sbjct: 70 YEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVP 129 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + + R +Q L E + D ++ D + N Sbjct: 130 PMTGKAIHVMCVHLGLREAHRQAQLAMLAEWVNELPDGELVLVAGDFNDWRQKANHPLKV 189 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 + +R+D I + + Sbjct: 190 QAGLDEIFTRAHGRPARTFPVQFPL-------------------LRLDRIYV----KNAS 226 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263 SA R W SDH P+ + + Sbjct: 227 ASAPTALPLRTWRHLSDHAPLSAEIHL 253 >gi|253570952|ref|ZP_04848360.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. 1_1_6] gi|251839901|gb|EES67984.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. 1_1_6] Length = 217 Score = 44.0 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 32/264 (12%), Positives = 62/264 (23%), Gaps = 58/264 (21%) Query: 2 SVVTVATWNVNS--IRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57 S + + TWN + I L + +++ +QE + P + +Y + Sbjct: 8 SHMKICTWNSQGNPLNDAIKLNILNHLLTTEQCNVVMIQE--CGNFILPAQHSGRYHYVV 65 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 + + ++ N TL + G+ Sbjct: 66 VEHAGAYNCRCNTCIIADLNFVASIHYLISGTGRSAICLNYNGCNIYTLHCESGSGAVGD 125 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 ++ P I GD N P Y I+ Sbjct: 126 IRDLVRHAVS-------------------PFIIGGDMNSTPSELSEYLRIMTTGTRSRPG 166 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 + + G +D+ ++ L Sbjct: 167 NSANFACCGMP-----------------THFS----------GRELDYFLIDSRL--QLR 197 Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261 + R K DH PVI+ + Sbjct: 198 TCV----RRYHMKGGDHYPVILEI 217 >gi|242239847|ref|YP_002988028.1| endonuclease/exonuclease/phosphatase [Dickeya dadantii Ech703] gi|242131904|gb|ACS86206.1| Endonuclease/exonuclease/phosphatase [Dickeya dadantii Ech703] Length = 253 Score = 44.0 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 27/247 (10%), Positives = 66/247 (26%), Gaps = 22/247 (8%) Query: 15 RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKY 74 R + L ++ + D++ LQE + + P H+E+ + + + Sbjct: 27 RFILPELREAVRSVSADVVFLQEVQGRHETHPL--------HVESWPDTPHYEFLAETMW 78 Query: 75 QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRF 134 + + D + + + L I + + Sbjct: 79 NDYAYGRNAVYPEGDHGNAVLSRFPIFSYRNLDISLSEHERRG-LLYCVLKVPNRDLHLH 137 Query: 135 LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDA 194 + + + + P++ D L+ Sbjct: 138 VVCVHLGMSPHRQRQQMELLHTLLDTIPPDVPLVVAGDFNDWLQQATPDLNRYARLEEVF 197 Query: 195 IRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDH 254 + + + +R+D I + ++ SA P+ W+ SDH Sbjct: 198 SQHYGKPARTF------PARFPL---LRLDRIYV----RNVRTSAPTLLGPKPWSHLSDH 244 Query: 255 TPVIVSL 261 P+ V + Sbjct: 245 APLAVEI 251 >gi|168044976|ref|XP_001774955.1| predicted protein [Physcomitrella patens subsp. patens] gi|162673702|gb|EDQ60221.1| predicted protein [Physcomitrella patens subsp. patens] Length = 547 Score = 44.0 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 39/292 (13%), Positives = 72/292 (24%), Gaps = 60/292 (20%) Query: 1 MSVVTVATWNV-------NSIRARIHNLAAWIKEN--NPDIICLQETK--TEDKNFPFET 49 M +++A+ NV +R R + PDI+ LQE K E+ + Sbjct: 140 MEPISLASLNVRCLGRGLAGVRKRRK-MKELFARVTPRPDILFLQEHKYSLEECQIRAQK 198 Query: 50 LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 + L Y + + + + L + + Q + + Sbjct: 199 VDFLRYTSRWSDTRYSAARDSFTGGIGMLLSKKLAEQICEHGVI-----DSGRAQYVTLQ 253 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 + I + + R + +L L + + W Sbjct: 254 LSHNLKLGIINISDKQGGAATTGRGQNEITAWNDLTLFLELSDCFLNGHFRKVGNKLFTW 313 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 +N V ID I L Sbjct: 314 DNGRQAPQMVCSC----------------------------------------IDRIYLP 333 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 L I + SDH P+ V L+ P + + ++ I Sbjct: 334 TAIHHLGGLTGIWS---SMPHISDHAPIFVKLNADRPPPPKPIRFNTHLLKI 382 >gi|225464293|ref|XP_002264857.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 546 Score = 44.0 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 10/33 (30%), Positives = 19/33 (57%), Gaps = 2/33 (6%) Query: 9 WNVNSIRARIHN--LAAWIKENNPDIICLQETK 39 WN + +R + +++ NPD++ +QETK Sbjct: 223 WNTRGLGSRNKRRVVKDFLRSKNPDVVMIQETK 255 >gi|311895579|dbj|BAJ27987.1| hypothetical protein KSE_21650 [Kitasatospora setae KM-6054] Length = 252 Score = 44.0 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 13/34 (38%), Positives = 21/34 (61%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQE 37 V V ++NV S+R +A I+ PD++C+QE Sbjct: 21 VRVLSYNVRSLRDDRAAVARVIRACAPDVVCVQE 54 >gi|325292791|ref|YP_004278655.1| endonuclease/exonuclease/phosphatase family protein [Agrobacterium sp. H13-3] gi|325060644|gb|ADY64335.1| endonuclease/exonuclease/phosphatase family protein [Agrobacterium sp. H13-3] Length = 267 Score = 44.0 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 32/277 (11%), Positives = 73/277 (26%), Gaps = 30/277 (10%) Query: 4 VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQE-TKTEDKNFPFETLQSLNYHIETCG 61 + + N ++H+ L +I ++PDI+CLQE T + + + + Sbjct: 1 MRLICLN--GWGGKLHDELVPYISASDPDILCLQEVVHTPAAEEDWLSYRDDGRDL-PQR 57 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 V GD + R+ I + G Sbjct: 58 ANFLRDVEEALPDHLAIFCPASQGDLWHGETRYPSQWGLATFVRKSIAIVAQAQGFVHGC 117 Query: 122 TKYD-DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + R + + P+ ++ A +++ Sbjct: 118 FSANGYGDHPRSRTGHAVRVFDFTTGQPAVIAHMHGLRDPNGKHDIPARLMQAKRLVKLV 177 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYS---------------FWDYYADSWSKNKGIRI-D 224 + + + ++ F D ++K R D Sbjct: 178 KDIAEDGDRIIVCGDFNVLPESDTFTVLKELDLIELVTTRGFTDTRTSHYAKQN--RFAD 235 Query: 225 HIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +++++P + R SDH P+++ Sbjct: 236 YMLVNP-----VVQVDHFDVVRQPEV-SDHCPLLIEF 266 >gi|323357343|ref|YP_004223739.1| exonuclease III [Microbacterium testaceum StLB037] gi|323273714|dbj|BAJ73859.1| exonuclease III [Microbacterium testaceum StLB037] Length = 232 Score = 44.0 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 11/51 (21%) Query: 3 VVTVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTEDKNFPFET 49 V+ V ++N R H L+ + E+ D++CLQE + ++ P E Sbjct: 2 VMKVISYN-----LRKHRAAGELSRLVDEHAVDVLCLQE--CDTRDIPVEI 45 >gi|81299809|ref|YP_400017.1| hypothetical protein Synpcc7942_1000 [Synechococcus elongatus PCC 7942] gi|81168690|gb|ABB57030.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942] Length = 1076 Score = 44.0 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 28/69 (40%), Gaps = 9/69 (13%) Query: 200 DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL--LHSARIDTKPRGWTKPSDHTPV 257 + Y+F + N IDHI++S + + ++T+ + SDH PV Sbjct: 883 PENERYTFI------FQGNSQS-IDHILVSGSLANRAEIDIVNVNTEFAESLQASDHDPV 935 Query: 258 IVSLDIPEP 266 + I P Sbjct: 936 LARFTIAAP 944 >gi|56750554|ref|YP_171255.1| hypothetical protein syc0545_d [Synechococcus elongatus PCC 6301] gi|56685513|dbj|BAD78735.1| hypothetical protein [Synechococcus elongatus PCC 6301] Length = 1088 Score = 44.0 bits (102), Expect = 0.022, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 28/69 (40%), Gaps = 9/69 (13%) Query: 200 DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL--LHSARIDTKPRGWTKPSDHTPV 257 + Y+F + N IDHI++S + + ++T+ + SDH PV Sbjct: 895 PENERYTFI------FQGNSQS-IDHILVSGSLANRAEIDIVNVNTEFAESLQASDHDPV 947 Query: 258 IVSLDIPEP 266 + I P Sbjct: 948 LARFTIAAP 956 >gi|298376208|ref|ZP_06986164.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_19] gi|298267245|gb|EFI08902.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_19] Length = 246 Score = 44.0 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 32/262 (12%), Positives = 64/262 (24%), Gaps = 49/262 (18%) Query: 4 VTVATWNVN-SI----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 + + ++N+ I + + +A I + PD + LQE Sbjct: 26 LRIMSYNIRIGIGMDQQTNLKRIAEVINKIQPDYVGLQEV-----------------DSV 68 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 N A L++ + + + + I P Sbjct: 69 CERSGWINQYAELARLTGMYPIFAPATERSKGLYGIAALSRKKPRSYQYIP--LPGKEEP 126 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 T + + L + +P E D+ Sbjct: 127 RTFLCLEYPNYTLCNTHFSLDPDSRLASIRLINETMKSENKPILITGDFNMEPDSKEFK- 185 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 + +L + + + H +R+D+I L H Sbjct: 186 TMKQTWRLLSDPTLETYPSDHPR-------------------LRLDYIF-----GDLRHE 221 Query: 239 ARIDTKPRGWTKPSDHTPVIVS 260 RI + SDH P+ + Sbjct: 222 FRIINDQVIDIQSSDHLPIYID 243 >gi|212212637|ref|YP_002303573.1| endonuclease/exonuclease/phosphatase family protein [Coxiella burnetii CbuG_Q212] gi|212011047|gb|ACJ18428.1| endonuclease/exonuclease/phosphatase family protein [Coxiella burnetii CbuG_Q212] Length = 255 Score = 44.0 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 36/273 (13%), Positives = 67/273 (24%), Gaps = 44/273 (16%) Query: 5 TVATWNVN-SIRARIHNLA-----AWIKENNPDIICLQET-----KTEDKNFPFETLQSL 53 TV ++N++ AR ++ + DI+ LQE K+ K F L Sbjct: 12 TVLSYNIHKGFSARYRRFVLPDIREALRAIDADIVLLQEVQGKHRKSRLKKFAHADL--- 68 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 SK+ + + + + + +L Sbjct: 69 ----------PQTEFIAESKWPHYMYGKNAVYGSAHHGNALLSNFPFKMVENINV-SLSQ 117 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 I D + + + E + Sbjct: 118 RASRSILHAIIDYEPTVELHVICIHLGLFRAERDYQLITL--SKRIEAHVPSHASLIIAG 175 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD---SWSKNKGIRIDHIMLSP 230 F R +F ++ + + H ++ A +G+ Sbjct: 176 DFNDWRRGAFNYMEKELELKEVYKVLEGKHAKTYPASRATLEVDRIYYRGL--------- 226 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 L S I + W K SDH P+ I Sbjct: 227 ----KLLSGEIFNESY-WKKLSDHLPLHAKFAI 254 >gi|145544246|ref|XP_001457808.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124425626|emb|CAK90411.1| unnamed protein product [Paramecium tetraurelia] Length = 239 Score = 44.0 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 41/269 (15%), Positives = 85/269 (31%), Gaps = 39/269 (14%) Query: 4 VTVATWNVNSIR-------ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56 + +AT+N IR R L + I+ N D+I LQE P + +Y Sbjct: 1 MRIATYN---IRNTQDQYLKRREILQSIIQGLNADVISLQEV-----ALPELDYLAGDYQ 52 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 + + +++ + ++ + N Q + IG++++ + Sbjct: 53 KFFAPIQLQFPLHPDPEFRIDGNAILVRKGLEVKLHEYVHISVFRNIQHIVIGDVHIYNT 112 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + D S + E GD+N+ P+ + + + +T Sbjct: 113 HLHHVIGDDQVRSHQIDNILTYLLGQMNERIF-LMGDFNLTPESQEYKKMTHYFKSS-YT 170 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 L ++ + G T T +F D+I + + Sbjct: 171 LANQKEPEITFPTGLTGPFMDTDPAG---TF----------------DYIWIRGNNIE-V 210 Query: 237 HSARID--TKPRGWTKPSDHTPVIVSLDI 263 + K + PSDH ++ +I Sbjct: 211 KECTLFGSDKIQEGVYPSDHLGILGVYNI 239 >gi|308460342|ref|XP_003092476.1| hypothetical protein CRE_30476 [Caenorhabditis remanei] gi|308253162|gb|EFO97114.1| hypothetical protein CRE_30476 [Caenorhabditis remanei] Length = 923 Score = 44.0 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 33/260 (12%), Positives = 70/260 (26%), Gaps = 35/260 (13%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENN---PDIICLQETKTEDKNFPFETLQSLNYHIETC 60 + + T+N S+ A + LA ++E N DII L ETK Sbjct: 21 LRICTFNCRSV-ATDNRLAELLEETNRIKYDIIGLSETK----------------RSAKV 63 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + +G ++ + V+ G ++ I + L + Sbjct: 64 HMTNRDGTGVILGKRNNSSVSGGVGFIINKSLMPKIKEIKIVNHRIGYITLQVNKNQCTI 123 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 Y + + + L + Y ++ + N+ Sbjct: 124 IQGYAPTAKYEEEEHSNFYENL-EDVYKSCKSRYKMVIGDFNARIGERKGNEVFIGPHSM 182 Query: 181 QSFQKLQN----MGFTDAIRATHDTHHLYSF--WDYYADSWSKNKGIRIDHIMLSPEATS 234 + + + + + W Y + +DHI+ + Sbjct: 183 EKRNDSGERLATFCEVNRVFHMNSQFIKATHRRWTYISPDKQHRHE--LDHILANG---K 237 Query: 235 LLHSARIDTKPRGWTKPSDH 254 + + +T SDH Sbjct: 238 YITDVSV---VPSFTNGSDH 254 >gi|218549643|ref|YP_002383434.1| metal-dependent hydrolase [Escherichia fergusonii ATCC 35469] gi|218357184|emb|CAQ89819.1| putative metal-dependent hydrolase [Escherichia fergusonii ATCC 35469] Length = 253 Score = 44.0 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 34/267 (12%), Positives = 64/267 (23%), Gaps = 32/267 (11%) Query: 5 TVATWNVN-SI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN--YH 56 V T N++ R + L ++ + DI+CLQE +++ H Sbjct: 11 KVLTINIHKGFTAFNRRFILPELRDAVRTVSADIVCLQEV-MGAHEVHPLHVENWPDTSH 69 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 E ++ A E + +++ R Sbjct: 70 YEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVP 129 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + + R +Q L E + D + D + N Sbjct: 130 PMTGKAIHVMCVHLGLREAHRQAQLAMLAEWVNELPDGEPVLVAGDFNDWRQKANHPLKV 189 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 + +R+D I + + Sbjct: 190 QAGLDEIFTRAHGRPARTFPVQFPL-------------------LRLDRIYV----KNAS 226 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263 SA R W SDH P+ + + Sbjct: 227 ASAPTALPLRTWRHLSDHAPLSAEIHL 253 >gi|254563795|ref|YP_003070890.1| hypothetical protein METDI5472 [Methylobacterium extorquens DM4] gi|254271073|emb|CAX27080.1| conserved hypothetical protein [Methylobacterium extorquens DM4] Length = 259 Score = 44.0 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 6/39 (15%) Query: 5 TVATWNVNSIR---ARIHNLAAWIKENNPDIICLQE-TK 39 + +WN+ +R A + L A I++ PD + +QE TK Sbjct: 19 KIVSWNL--LRRTGAAVDCLVALIEQERPDFLLMQEATK 55 >gi|218532778|ref|YP_002423594.1| endonuclease/exonuclease/phosphatase [Methylobacterium chloromethanicum CM4] gi|218525081|gb|ACK85666.1| Endonuclease/exonuclease/phosphatase [Methylobacterium chloromethanicum CM4] Length = 259 Score = 44.0 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 6/39 (15%) Query: 5 TVATWNVNSIR---ARIHNLAAWIKENNPDIICLQE-TK 39 + +WN+ +R A + L A I++ PD + +QE TK Sbjct: 19 KIVSWNL--LRRTGAAVDCLVALIEQERPDFLLMQEATK 55 >gi|163853833|ref|YP_001641876.1| endonuclease/exonuclease/phosphatase [Methylobacterium extorquens PA1] gi|163665438|gb|ABY32805.1| Endonuclease/exonuclease/phosphatase [Methylobacterium extorquens PA1] Length = 259 Score = 44.0 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 6/39 (15%) Query: 5 TVATWNVNSIR---ARIHNLAAWIKENNPDIICLQE-TK 39 + +WN+ +R A + L A I++ PD + +QE TK Sbjct: 19 KIVSWNL--LRRTGAAVDCLVALIEQERPDFLLMQEATK 55 >gi|260910352|ref|ZP_05917025.1| endonuclease/exonuclease/phosphatase [Prevotella sp. oral taxon 472 str. F0295] gi|260635535|gb|EEX53552.1| endonuclease/exonuclease/phosphatase [Prevotella sp. oral taxon 472 str. F0295] Length = 310 Score = 44.0 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 35/280 (12%), Positives = 68/280 (24%), Gaps = 57/280 (20%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80 +A + ++PD QE +Y G+ + Sbjct: 54 IADQLNYHHPDAFGAQEV--LKGQLDDMLRALPDYDYVGVGRDDGREAGEYAPIFYRRDR 111 Query: 81 THLPGD-DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFAS 139 GD + + + + + +RI + ++ Sbjct: 112 LDKLGDGYFWLSPTYTKPSLGWDAACIRICTWAKFKVRESGKVFLFFNLHTDHVGVKARR 171 Query: 140 QRLE-----------LEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN 188 + + + P++ GD+N+ A + + Sbjct: 172 ESAKLVMKAIEGLGGKDMPVVLTGDFNVDQTDETYAIFTAN---ARLNDAYVVAKHRFAE 228 Query: 189 MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT--------------- 233 G ++ T T RIDHI +SP + Sbjct: 229 NGTFNSFNPTLKTT------------------SRIDHIFVSPRFSVARYAVLPNFYWTEE 270 Query: 234 -----SLLHSA--RIDTKPRGWTKPSDHTPVIVSLDIPEP 266 A +ID K SDH PV +++ Sbjct: 271 PATKSQKGQDAPQQIDLKQHQLRTASDHYPVFAEINLNSK 310 >gi|189192006|ref|XP_001932342.1| inositol phosphosphingolipids phospholipase C [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187973948|gb|EDU41447.1| inositol phosphosphingolipids phospholipase C [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 429 Score = 44.0 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 46/323 (14%), Positives = 76/323 (23%), Gaps = 57/323 (17%) Query: 2 SVVTVATWNVNSIR----ARIHNLAAW---IKEN--NPDIICLQETKTEDK--NFPFETL 50 S + V + N ++ R L I PDI+ LQE T+ +T Sbjct: 10 SSLRVISLNCWGLKFISTLRNERLTEIGVQIAAASPRPDIVGLQECWTQQDYNVIREKTQ 69 Query: 51 QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 L Y G+ ILS++ IE + A + F + Sbjct: 70 HILPYGKFYHSGIFGGGLVILSRWPIIESNMVRYPLNGRPAAFYRGDWFVAQAWEIT--- 126 Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170 + + + +E + I+ Sbjct: 127 ---KLMRGAAERGHLVIGMGDFNMVPLSLAHRIIETHSPVRDVWRILHPESSIGAAKDKV 183 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF-WDYYADSW-------------S 216 F N D+ S+ W+ Sbjct: 184 EQLRGVPMPSAQFNMTVNGATCDSELN--------SWRWNKQQQKRLTKGENVQIDPAVP 235 Query: 217 KNKGIRIDHIMLS-----------PEATSLLHSARI---DTKPRGWTKPSDHTPVIVSLD 262 R+D++ S A L A + P SDH V +L Sbjct: 236 DPNAKRLDYVFFSSGRYHNPETKEETAEWELKEANVGMEMRHPTLHCSLSDHFSVEATLT 295 Query: 263 ----IPEPRKKQQDSTSQNMKPI 281 P + + + PI Sbjct: 296 RSVVAPSAVELPPSALPERYLPI 318 >gi|71064661|ref|YP_263388.1| hypothetical protein Psyc_0080 [Psychrobacter arcticus 273-4] gi|71037646|gb|AAZ17954.1| conserved hypothetical protein [Psychrobacter arcticus 273-4] Length = 302 Score = 44.0 bits (102), Expect = 0.023, Method: Composition-based stats. Identities = 32/265 (12%), Positives = 64/265 (24%), Gaps = 57/265 (21%) Query: 18 IHNLAAWIKENNPDIICLQETKTE-----------DKNFPFETL-------QSLNYHIET 59 + +A + DI+CLQE + + E S + E Sbjct: 77 VQGIAQALDIIGSDILCLQEVQGQNLKRNIQYNEYPDQSQHEWFGEYLQLENSYGKNSEY 136 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 N V P V E + + +L Sbjct: 137 ENGHHGNAVLSRFPLDPKHNVNITVNKLEQRGVLHCEVQPVGWNVPVVVLCAHLNLFERD 196 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 +Y+ +++++ + + + W+ +C L Sbjct: 197 RIKQYEAIVNYVRDEIAPDQPLILAGDFND-------------------WKKMSCDKLAS 237 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + + + S +D I + + A Sbjct: 238 NLGMTEAFKHCHGKLLPTFPAKLPVLS----------------LDRIYV-RNL--RIKDA 278 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIP 264 + T W+ SDH P+ L +P Sbjct: 279 WVHTGK-PWSTLSDHLPLSAELALP 302 >gi|320104208|ref|YP_004179799.1| endonuclease/exonuclease/phosphatase [Isosphaera pallida ATCC 43644] gi|319751490|gb|ADV63250.1| Endonuclease/exonuclease/phosphatase [Isosphaera pallida ATCC 43644] Length = 271 Score = 44.0 bits (102), Expect = 0.024, Method: Composition-based stats. Identities = 40/278 (14%), Positives = 81/278 (29%), Gaps = 37/278 (13%) Query: 4 VTVATWNV------NSIRA---RIHNLAAWIKENNPDIICLQ-------ETKTEDKNFPF 47 + V T+N+ + A R + + +++PD++ LQ ET + P Sbjct: 9 LKVLTFNLRYADAADGPNAWPNRREAVKQVLIDHDPDLVLLQEALAVQVETVC--EALPG 66 Query: 48 ETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI---NTQ 104 + + + +++ T D D + Sbjct: 67 HLAVGSGRNDGRDDGEFVPILIRARRFRLETARTFWLSDTPDQPGSISRSWGNHLPRIGV 126 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 +R+ + + + D + +R + + Sbjct: 127 EVRLVDRLGGRRWVVGNLHLDHDSAEARRRGLDLAVDRLTAAAVASGD----------PR 176 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRID 224 ++ D E + L A + + D+ G RID Sbjct: 177 VLLLMGGDFNAPTEDNTLRRHLGEGFIDLVTAADPSLAAVGTRHDFLGQG-----GPRID 231 Query: 225 HIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 H+ L + + +A IDT+P PSDH PV ++ Sbjct: 232 HLWLRGGEFTPI-AAGIDTRPMLERMPSDHHPVWAVVE 268 >gi|108708285|gb|ABF96080.1| Endonuclease/Exonuclease/phosphatase family protein, expressed [Oryza sativa Japonica Group] Length = 523 Score = 44.0 bits (102), Expect = 0.024, Method: Composition-based stats. Identities = 41/251 (16%), Positives = 75/251 (29%), Gaps = 16/251 (6%) Query: 16 ARIHNLAAWIKENNPDIICLQETKTEDKN---FPFETLQSLNY-HIETCGQKSYNGVAIL 71 AR ++A ++E D++ LQ + E+ E + L ++ G A+L Sbjct: 245 ARRRSVAEALREAGADMVALQNVRAEEGRGMRPLSELAEGLGMRYVFAESWAPEYGNAVL 304 Query: 72 SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWI 131 S++ D D + + + +L H + K D I Sbjct: 305 SRWPIKRWNARRLADHFDFRNVMRATIEVPGAGEVNLYCTHLDHLDEGLRMKQVDSILRF 364 Query: 132 KRFLRFASQR--LELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNM 189 L+ A + I + H+ +++ L+ ++ Sbjct: 365 ADGHHHILAGGLNALDASDYSADRWAAIAKYHEEIGKPPPKSEVMRHLKAKRYVDAKDFA 424 Query: 190 GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT 249 G DA D G R+D+I+ SP + Sbjct: 425 GGRDAGLVVVPNGQ-----DVQGTCK---YGTRVDYILASPNSPYNFVPGS--YAVVPSM 474 Query: 250 KPSDHTPVIVS 260 SDH V+V Sbjct: 475 GTSDHHIVMVD 485 >gi|309782328|ref|ZP_07677055.1| endonuclease/exonuclease/phosphatase [Ralstonia sp. 5_7_47FAA] gi|308918946|gb|EFP64616.1| endonuclease/exonuclease/phosphatase [Ralstonia sp. 5_7_47FAA] Length = 287 Score = 44.0 bits (102), Expect = 0.024, Method: Composition-based stats. Identities = 46/285 (16%), Positives = 86/285 (30%), Gaps = 34/285 (11%) Query: 6 VATWNVNSIRARIHN--LAAWIKENN----PDIICLQETKTEDKNFP--------FETLQ 51 + TWN+ R + LA +K+ D++CLQE + + P E Sbjct: 5 ILTWNIQWGRGADGHVSLARQLKQAREMAEFDVLCLQEVTSGFSDLPGQPGADQWSELAD 64 Query: 52 SLNYHI--------------ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA 97 +L + + Y + P + IEA Sbjct: 65 ALGSEYTVIGGFALERHNGAHVQRFGNAIATRLPVHYIQRHALPCPPDTTPYMPRMAIEA 124 Query: 98 TFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII 157 LRI +L + + + D + I + + AG + + Sbjct: 125 IVQAAFGALRIVTTHLEYYSELQRVAQIDALRAIHTEGCARANQPARLGAEPEAGPFRPL 184 Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWS 216 Q + A + + + DA H T +F Y W+ Sbjct: 185 AQTKATIICGDFNCKADSMPKRLATAPFAREPALHDAWEIAHGATPQPPTFGVYDRADWT 244 Query: 217 KNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + D +++S + I++ T+ SDH P+++ L Sbjct: 245 EPAYA-CDFMLISEPLKPRVLRLEINSA----TQASDHQPMLLEL 284 >gi|168035674|ref|XP_001770334.1| predicted protein [Physcomitrella patens subsp. patens] gi|162678365|gb|EDQ64824.1| predicted protein [Physcomitrella patens subsp. patens] Length = 623 Score = 44.0 bits (102), Expect = 0.024, Method: Composition-based stats. Identities = 23/128 (17%), Positives = 40/128 (31%), Gaps = 17/128 (13%) Query: 147 PLIFAGDYNIIPQPHDCYNPIIWENDACFTL-----EVRQSFQKLQNMGFTDAIRATHDT 201 + I Q H + + + + E N TD + Sbjct: 439 WHKLVSNLPINCQWHIAGDFNMMDKSSQCGRLLSGGEKFAWESFRSNFQVTDPFKFQGKL 498 Query: 202 HHLYSFWDYYADSWSKNKGIRIDHIMLS----PEATSLLHSARIDTKPRGWTKPSDHTPV 257 ++ WD + G R+D LS P+ ++ + I G SDH PV Sbjct: 499 --RFT-WDNQHKDGCRIPG-RLDRYYLSESQNPDFSAAVKECAIL----GANTISDHHPV 550 Query: 258 IVSLDIPE 265 + L + + Sbjct: 551 RLELALTD 558 >gi|70733598|ref|YP_257238.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas fluorescens Pf-5] gi|68347897|gb|AAY95503.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas fluorescens Pf-5] Length = 292 Score = 44.0 bits (102), Expect = 0.024, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 14/59 (23%) Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 +F + +DHI+LSP T L + +P SDH PV V + +P Sbjct: 228 TFPSWRPQ-------RCLDHILLSPSLT--LERVEVLAQP-----ISDHLPVAVEIRLP 272 >gi|170693030|ref|ZP_02884191.1| Endonuclease/exonuclease/phosphatase [Burkholderia graminis C4D1M] gi|170142028|gb|EDT10195.1| Endonuclease/exonuclease/phosphatase [Burkholderia graminis C4D1M] Length = 292 Score = 44.0 bits (102), Expect = 0.024, Method: Composition-based stats. Identities = 8/38 (21%), Positives = 16/38 (42%), Gaps = 4/38 (10%) Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 D + ++ + + +D R SDH P+ + L Sbjct: 258 DFVFVTEDLAPRVACCEVDAHSRS----SDHQPMWLEL 291 >gi|241662748|ref|YP_002981108.1| endonuclease/exonuclease/phosphatase [Ralstonia pickettii 12D] gi|240864775|gb|ACS62436.1| Endonuclease/exonuclease/phosphatase [Ralstonia pickettii 12D] Length = 287 Score = 44.0 bits (102), Expect = 0.024, Method: Composition-based stats. Identities = 46/285 (16%), Positives = 86/285 (30%), Gaps = 34/285 (11%) Query: 6 VATWNVNSIRARIHN--LAAWIKENN----PDIICLQETKTEDKNFP--------FETLQ 51 + TWN+ R + LA +K+ D++CLQE + + P E Sbjct: 5 ILTWNIQWGRGADGHVSLARQLKQAREMAEFDVLCLQEVTSGFSDLPGQPGADQWSELAD 64 Query: 52 SLNYHI--------------ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA 97 +L + + Y + P + IEA Sbjct: 65 ALGSEYTVIGGFALERHNGAHVQRFGNAIATRLPVHYIQRHALPCPPDTTPYMPRMAIEA 124 Query: 98 TFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII 157 LRI +L + + + D + I + + AG + + Sbjct: 125 IVQAAFGALRIVTTHLEYYSELQRVAQIDALRAIHTEGCARANQPATLGAEPEAGPFRPL 184 Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWS 216 Q + A + + + DA H T +F Y W+ Sbjct: 185 AQTKATIICGDFNCKADSMPKRLATAPFAREPALHDAWEIAHGATPQPPTFGVYDRADWT 244 Query: 217 KNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + D +++S + I++ T+ SDH P+++ L Sbjct: 245 EPAYA-CDFMLISEPLKPRVLRLEINSA----TQASDHQPMLLEL 284 >gi|150008523|ref|YP_001303266.1| hypothetical protein BDI_1909 [Parabacteroides distasonis ATCC 8503] gi|256841460|ref|ZP_05546967.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|149936947|gb|ABR43644.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503] gi|256737303|gb|EEU50630.1| conserved hypothetical protein [Parabacteroides sp. D13] Length = 246 Score = 44.0 bits (102), Expect = 0.024, Method: Composition-based stats. Identities = 33/262 (12%), Positives = 68/262 (25%), Gaps = 49/262 (18%) Query: 4 VTVATWNVN-SI----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 + + ++N+ I + + +A I + PD + LQE Sbjct: 26 LRIMSYNIRIGIGMDQQTNLKRIAEVINKIQPDYVGLQEV-----------------DSV 68 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 N A L++ + + + + I P Sbjct: 69 CERSGWINQYAELARLTGMYPIFAPATERSKGLYGIAALSRKKPRSYQYIP--LPGKEEP 126 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 T + + L + +P E D+ Sbjct: 127 RTFLCLEYPNYTLCNTHFSLDPDSRLASIRLINETMKSENKPILITGDFNMEPDSKEFKA 186 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 ++Q+++ L + + + H +R+D+I L H Sbjct: 187 MKQTWRLLSD-PTLETYPSDHPR-------------------LRLDYIF-----GDLRHE 221 Query: 239 ARIDTKPRGWTKPSDHTPVIVS 260 RI + SDH P+ + Sbjct: 222 FRIINDQVIDIQSSDHLPIYID 243 >gi|325185771|emb|CCA20275.1| pollike protein putative [Albugo laibachii Nc14] Length = 933 Score = 44.0 bits (102), Expect = 0.024, Method: Composition-based stats. Identities = 43/271 (15%), Positives = 79/271 (29%), Gaps = 22/271 (8%) Query: 7 ATWNVNSIRARIHNLAA-WIKENNPDIICLQETKTEDKN---FPFETLQSLNYHIETCGQ 62 + N+N + L + I LQET+ ++ +S+N + T Sbjct: 318 LSLNINGLNKPHPTLYRTLLSRYQS--IALQETRLSSEDNRRINEHFFRSVNAN-ATLFW 374 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 + + +++ V ++ + L + L I Sbjct: 375 SPCPASSSKGRNGVGLLLSSAHPFGPVVNITARHLPSALHDRYLILDTSILSQRVWIHVV 434 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + S +F L + I GD+N+ P + + + Sbjct: 435 YAPAQSSDQIQFFTSLPTDLPRDVQHIVLGDFNVPLDPTLDLSHLRPAGTN-----IDAF 489 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 Q ++G DA R TH + Y+ R+D+ LS E I Sbjct: 490 LQWNLHLGLVDAWRLTHPSVQEYT-----GPGRRN----RLDYCFLSTELFQSSL-THIA 539 Query: 243 TKPRGWTKPSDHTPVIVSLDIPEPRKKQQDS 273 +DH PV L P+ + Sbjct: 540 HDHLTQYHLADHLPVTFLLQHPDHPGHSRQP 570 >gi|307718261|ref|YP_003873793.1| endonuclease/exonuclease/phosphatase family protein [Spirochaeta thermophila DSM 6192] gi|306531986|gb|ADN01520.1| endonuclease/exonuclease/phosphatase family protein [Spirochaeta thermophila DSM 6192] Length = 311 Score = 44.0 bits (102), Expect = 0.024, Method: Composition-based stats. Identities = 29/269 (10%), Positives = 63/269 (23%), Gaps = 48/269 (17%) Query: 17 RIHNLAAWIKENNPDIICLQET---KTEDKNFPFETLQSLNYHIETCGQKS---YNGVAI 70 R+ ++ ++ + D++ LQE + L Y ++ + V Sbjct: 60 RLEAVSRVVRSLDADVLILQEVENERVL-GRLVSGYLADAGYRWHFLPEEEGAVHVAVLS 118 Query: 71 LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISW 130 + + + +++ Q G + P + + Sbjct: 119 RIPVEGVRVHALKDPRVAALRSVVEVEYRLGGEQVFLFGVHLISRAGPAWRDEIRRNQLF 178 Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG 190 + +R ++ GD+ ++ Sbjct: 179 LIARRLEEIRRTAPGVHVLVGGDF--------------NMEADAVETFFDRALFPQDVHS 224 Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS----LLHSARI----- 241 + Y +Y W RID + + + Sbjct: 225 VWSMMVPGTMPPGSY----WYEGRWE-----RIDGFFFTEGLRDGVGLDVTGGEVVAFPW 275 Query: 242 DTKPRG---------WTKPSDHTPVIVSL 261 RG + SDH PV V L Sbjct: 276 LLDERGRPWSWDMGTGSGYSDHLPVKVIL 304 >gi|260854081|ref|YP_003227972.1| putative DNase [Escherichia coli O26:H11 str. 11368] gi|257752730|dbj|BAI24232.1| predicted DNase [Escherichia coli O26:H11 str. 11368] gi|323155689|gb|EFZ41860.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia coli EPECa14] Length = 253 Score = 44.0 bits (102), Expect = 0.024, Method: Composition-based stats. Identities = 33/267 (12%), Positives = 64/267 (23%), Gaps = 32/267 (11%) Query: 5 TVATWNVN-SI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN--YH 56 V T N++ R + L ++ + DI+CLQE +++ H Sbjct: 11 KVLTINIHKGFTAFNRRFILPELRDAVRTVSADIVCLQEV-MGAHEVHPLHVENWPDTSH 69 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 E ++ A + + +++ R Sbjct: 70 YEFLADTMWSDFAYGRNAVYPKGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVP 129 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + + R +Q L E + D + D + N Sbjct: 130 PMTGKAIHVMCVHLGLREAHRQAQLAMLAEWVNELPDGEPVLVAGDFNDWRQKANHPLKV 189 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 + +R+D I + + Sbjct: 190 QAGLDEIFTRAHGRPARTFPVQFPL-------------------LRLDRIYV----KNAS 226 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263 SA R W SDH P+ + + Sbjct: 227 ASAPTALPLRTWRHLSDHAPLSAEIHL 253 >gi|157158045|ref|YP_001461980.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli E24377A] gi|300822925|ref|ZP_07103060.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 119-7] gi|300922814|ref|ZP_07138900.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 182-1] gi|301327982|ref|ZP_07221147.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 78-1] gi|331667154|ref|ZP_08368019.1| putative cytoplasmic protein [Escherichia coli TA271] gi|331676525|ref|ZP_08377221.1| putative cytoplasmic protein [Escherichia coli H591] gi|157080075|gb|ABV19783.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli E24377A] gi|300420846|gb|EFK04157.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 182-1] gi|300524466|gb|EFK45535.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 119-7] gi|300845547|gb|EFK73307.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 78-1] gi|320198979|gb|EFW73576.1| Endonuclease/Exonuclease/phosphatase family protein [Escherichia coli EC4100B] gi|331065510|gb|EGI37403.1| putative cytoplasmic protein [Escherichia coli TA271] gi|331075214|gb|EGI46512.1| putative cytoplasmic protein [Escherichia coli H591] Length = 253 Score = 44.0 bits (102), Expect = 0.024, Method: Composition-based stats. Identities = 34/267 (12%), Positives = 64/267 (23%), Gaps = 32/267 (11%) Query: 5 TVATWNVN-SI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN--YH 56 V T N++ R + L ++ + DI+CLQE +++ H Sbjct: 11 KVLTINIHKGFTAFNRRFILPELRDAVRTVSADIVCLQEV-MGAHEVHPLHVENWPDTSH 69 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 E ++ A E + +++ R Sbjct: 70 YEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVP 129 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + + R +Q L E + D + D + N Sbjct: 130 PMTGKAIHVMCVHLGLREAHRQAQLAMLAEWVNELPDGEPVLVAGDFNDWRQKANHPLKV 189 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 + +R+D I + + Sbjct: 190 QAGLDEIFTRVHGRPARTFPVQFPL-------------------LRLDRIYV----KNAS 226 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263 SA R W SDH P+ + + Sbjct: 227 ASAPTALPLRTWRHLSDHAPLSAEIHL 253 >gi|254260300|ref|ZP_04951354.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1710a] gi|254218989|gb|EET08373.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1710a] Length = 305 Score = 44.0 bits (102), Expect = 0.025, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 4/38 (10%) Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 D ++ L ID G + SDH P+++ L Sbjct: 269 DFAFVTDTLVRRLSRCEID----GTVRASDHQPIVLEL 302 >gi|242317310|ref|ZP_04816326.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1106b] gi|242140549|gb|EES26951.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1106b] Length = 305 Score = 44.0 bits (102), Expect = 0.025, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 4/38 (10%) Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 D ++ L ID G + SDH P+++ L Sbjct: 269 DFAFVTDTLVRRLSRCEID----GTVRASDHQPIVLEL 302 >gi|237727294|ref|ZP_04557775.1| conserved hypothetical protein [Bacteroides sp. D4] gi|229434150|gb|EEO44227.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4] Length = 334 Score = 44.0 bits (102), Expect = 0.025, Method: Composition-based stats. Identities = 35/257 (13%), Positives = 66/257 (25%), Gaps = 37/257 (14%) Query: 4 VTVATWNVNSIRARIHNLAAWIKE---NNPDIICLQE---TKTEDKNFPFETLQSLNYHI 57 + + WN R LA I P I+CLQE T + Y I Sbjct: 96 LKLVCWNAEGFRLNKDTLAKAIHSIRILQPGIVCLQERPHTNLLAWDTIRAAFPDYPYCI 155 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 + +A+ S++ + + D + + + + G Sbjct: 156 VNSREDEILNLAVFSRWPVGNVQEYYFPDSYNKMLQADIRMIGQTFRLFNVH--LQTTGM 213 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 +S+ D + +R Q L + + I+ + +L Sbjct: 214 NESSSMKDRLQTMRHHAIRRNRQADLLANAIAESPYPVIVCGDFNDTPASYVYRKISRSL 273 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 + G +RID+ + SP Sbjct: 274 QDCFLQAGRTWKGSYQRWGDF----------------------LRIDYTLCSPAF----- 306 Query: 238 SARIDTKPRGWTKPSDH 254 +++ SDH Sbjct: 307 --QVNCYQLVSNPWSDH 321 >gi|53726143|ref|YP_103011.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei ATCC 23344] gi|52429566|gb|AAU50159.1| endonuclease/exonuclease/phosphatase family superfamily [Burkholderia mallei ATCC 23344] Length = 324 Score = 44.0 bits (102), Expect = 0.025, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 4/38 (10%) Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 D ++ L ID G + SDH P+++ L Sbjct: 288 DFAFVTDTLVRRLSRCEID----GTVRASDHQPIVLEL 321 >gi|126438983|ref|YP_001059231.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 668] gi|126218476|gb|ABN81982.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 668] Length = 286 Score = 44.0 bits (102), Expect = 0.025, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 4/38 (10%) Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 D ++ L ID G + SDH P+++ L Sbjct: 250 DFAFVTDTLVRRLSRCEID----GTVRASDHQPIVLEL 283 >gi|76808611|ref|YP_333756.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1710b] gi|237812555|ref|YP_002897006.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei MSHR346] gi|254179545|ref|ZP_04886144.1| endonuclease/exonuclease/phosphatase family superfamily [Burkholderia pseudomallei 1655] gi|254189064|ref|ZP_04895575.1| endonuclease/exonuclease/phosphatase family superfamily [Burkholderia pseudomallei Pasteur 52237] gi|76578064|gb|ABA47539.1| endonuclease/exonuclease/phosphatase family superfamily [Burkholderia pseudomallei 1710b] gi|157936743|gb|EDO92413.1| endonuclease/exonuclease/phosphatase family superfamily [Burkholderia pseudomallei Pasteur 52237] gi|184210085|gb|EDU07128.1| endonuclease/exonuclease/phosphatase family superfamily [Burkholderia pseudomallei 1655] gi|237503102|gb|ACQ95420.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei MSHR346] Length = 286 Score = 44.0 bits (102), Expect = 0.025, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 4/38 (10%) Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 D ++ L ID G + SDH P+++ L Sbjct: 250 DFAFVTDTLVRRLSRCEID----GTVRASDHQPIVLEL 283 >gi|121601098|ref|YP_993160.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei SAVP1] gi|121229908|gb|ABM52426.1| endonuclease/exonuclease/phosphatase family superfamily [Burkholderia mallei SAVP1] Length = 286 Score = 44.0 bits (102), Expect = 0.025, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 4/38 (10%) Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 D ++ L ID G + SDH P+++ L Sbjct: 250 DFAFVTDTLVRRLSRCEID----GTVRASDHQPIVLEL 283 >gi|53719141|ref|YP_108127.1| hypothetical protein BPSL1507 [Burkholderia pseudomallei K96243] gi|67639890|ref|ZP_00438719.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei GB8 horse 4] gi|124383859|ref|YP_001026065.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei NCTC 10229] gi|126449985|ref|YP_001080667.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei NCTC 10247] gi|126454152|ref|YP_001066498.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1106a] gi|134277293|ref|ZP_01764008.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 305] gi|167002249|ref|ZP_02268039.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei PRL-20] gi|167845399|ref|ZP_02470907.1| endonuclease/exonuclease/phosphatase family superfamily protein [Burkholderia pseudomallei B7210] gi|167902390|ref|ZP_02489595.1| endonuclease/exonuclease/phosphatase family superfamily protein [Burkholderia pseudomallei NCTC 13177] gi|167910632|ref|ZP_02497723.1| endonuclease/exonuclease/phosphatase family superfamily protein [Burkholderia pseudomallei 112] gi|217421528|ref|ZP_03453032.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 576] gi|226197165|ref|ZP_03792742.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei Pakistan 9] gi|254178197|ref|ZP_04884852.1| endonuclease/exonuclease/phosphatase family superfamily [Burkholderia mallei ATCC 10399] gi|254197468|ref|ZP_04903890.1| endonuclease/exonuclease/phosphatase family superfamily [Burkholderia pseudomallei S13] gi|254199957|ref|ZP_04906323.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei FMH] gi|254206290|ref|ZP_04912642.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei JHU] gi|254297422|ref|ZP_04964875.1| endonuclease/exonuclease/phosphatase family superfamily [Burkholderia pseudomallei 406e] gi|254358295|ref|ZP_04974568.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei 2002721280] gi|52209555|emb|CAH35508.1| conserved hypothetical protein [Burkholderia pseudomallei K96243] gi|124291879|gb|ABN01148.1| endonuclease/exonuclease/phosphatase family superfamily [Burkholderia mallei NCTC 10229] gi|126227794|gb|ABN91334.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1106a] gi|126242855|gb|ABO05948.1| endonuclease/exonuclease/phosphatase family superfamily [Burkholderia mallei NCTC 10247] gi|134250943|gb|EBA51022.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 305] gi|147749553|gb|EDK56627.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei FMH] gi|147753733|gb|EDK60798.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei JHU] gi|148027422|gb|EDK85443.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei 2002721280] gi|157807264|gb|EDO84434.1| endonuclease/exonuclease/phosphatase family superfamily [Burkholderia pseudomallei 406e] gi|160699236|gb|EDP89206.1| endonuclease/exonuclease/phosphatase family superfamily [Burkholderia mallei ATCC 10399] gi|169654209|gb|EDS86902.1| endonuclease/exonuclease/phosphatase family superfamily [Burkholderia pseudomallei S13] gi|217395270|gb|EEC35288.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 576] gi|225930544|gb|EEH26554.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei Pakistan 9] gi|238520501|gb|EEP83960.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei GB8 horse 4] gi|243062066|gb|EES44252.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia mallei PRL-20] Length = 286 Score = 44.0 bits (102), Expect = 0.025, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 4/38 (10%) Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 D ++ L ID G + SDH P+++ L Sbjct: 250 DFAFVTDTLVRRLSRCEID----GTVRASDHQPIVLEL 283 >gi|321249742|ref|XP_003191557.1| phospholipase C [Cryptococcus gattii WM276] gi|317458024|gb|ADV19770.1| phospholipase C, putative [Cryptococcus gattii WM276] Length = 529 Score = 44.0 bits (102), Expect = 0.025, Method: Composition-based stats. Identities = 40/245 (16%), Positives = 71/245 (28%), Gaps = 28/245 (11%) Query: 15 RARIHNLAAWIKENNPDIICLQETKT-EDKNFPFETLQS-LNYHIETCGQKSYNGVAILS 72 R RI +A ++ ++ DI+CLQE +D E +Q L + +G+AI + Sbjct: 32 RTRIQAIAEYMASSSYDIVCLQELWIYKDYEVVREEVQGNLPFSRFFHTGALGSGLAIFT 91 Query: 73 KYQPIEIV-----------THLPGDDLDVQARFIEATFTINTQTLRIGNLYLP-HGNPIT 120 ++ I GD +A + I N ++ G Sbjct: 92 RFPLIAAHALPYSLSGSPAQAFAGDFFVKKAAGNVVILHPVLGEVEIWNTHMHAAGEHPP 151 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 T+ +I+ + + GD+N P + +V Sbjct: 152 DTRQAHRIAQSWQLANAVRGGAAKGRYVFVMGDFNSQPWSIPIAMMRDHAHLTDSFAQVH 211 Query: 181 ------QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK----GIRIDHIMLSP 230 S + YS +N G R+D+I Sbjct: 212 LSANSEISPPPSPAEALKVYGMTCDSPLNTYS----AGKPIPENVLERGGKRLDYIFFRQ 267 Query: 231 EATSL 235 A + Sbjct: 268 PAVAR 272 >gi|154706938|ref|YP_001424522.1| endonuclease/exonuclease/phosphatase family protein [Coxiella burnetii Dugway 5J108-111] gi|165918872|ref|ZP_02218958.1| endonuclease/exonuclease/phosphatase family protein [Coxiella burnetii RSA 334] gi|154356224|gb|ABS77686.1| endonuclease/exonuclease/phosphatase family protein [Coxiella burnetii Dugway 5J108-111] gi|165917420|gb|EDR36024.1| endonuclease/exonuclease/phosphatase family protein [Coxiella burnetii RSA 334] Length = 255 Score = 44.0 bits (102), Expect = 0.025, Method: Composition-based stats. Identities = 38/270 (14%), Positives = 67/270 (24%), Gaps = 38/270 (14%) Query: 5 TVATWNVN-SIRARIHNLA-----AWIKENNPDIICLQET-----KTEDKNFPFETLQSL 53 TV ++N++ AR ++ + DI+ LQE K+ K F L Sbjct: 12 TVLSYNIHKGFSARYRRFVLPDIREALRAIDADIVLLQEVQGKHRKSRLKKFAHADL--- 68 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 SK+ + + + + + +L Sbjct: 69 ----------PQTEFIAESKWPHYMYGKNAVYGSAHHGNALLSNFPFKMVENINV-SLSQ 117 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 I D + + + E I + P+I D Sbjct: 118 RASRSILHAIIDYEPTVELHVICIHLGLFRAERDYQLITLSKRIEAHVPSHAPLIIAGDF 177 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 ++ + + Y S + RI + Sbjct: 178 NDWRRGAFNYMEKELELKEVYKVLEGKHAKTY------PASRPTLEVDRIYY----RGL- 226 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 L S I + W K SDH P+ I Sbjct: 227 -KLLSGEIFNESY-WKKLSDHLPLHAKFAI 254 >gi|320654071|gb|EFX22139.1| hypothetical protein ECO7815_07649 [Escherichia coli O55:H7 str. 3256-97 TW 07815] Length = 253 Score = 44.0 bits (102), Expect = 0.025, Method: Composition-based stats. Identities = 34/267 (12%), Positives = 64/267 (23%), Gaps = 32/267 (11%) Query: 5 TVATWNVN-SI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN--YH 56 V T N++ R + L ++ + DI+CLQE +++ H Sbjct: 11 KVLTINIHKGFTAFNRRFILPELRDAVRTVSADIVCLQEV-MGAHEVHPLHVENWPDTSH 69 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 E ++ A E + +++ R Sbjct: 70 YEFLADTMWSDFAYGHNAVYPEGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVP 129 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + + R +Q L E + D + D + N Sbjct: 130 PMTGKAIHVMCVHLGLREAHRQAQLAMLAEWVNELPDGEPVLVAGDFNDWRQKANHPLKV 189 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 + +R+D I + + Sbjct: 190 QAGLDEIFTRAHGRPARTFPVQFPL-------------------LRLDRIYV----KNAS 226 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263 SA R W SDH P+ + + Sbjct: 227 ASAPTALPLRTWRHLSDHAPLSAEIHL 253 >gi|66825681|ref|XP_646195.1| hypothetical protein DDB_G0269692 [Dictyostelium discoideum AX4] gi|60474259|gb|EAL72196.1| hypothetical protein DDB_G0269692 [Dictyostelium discoideum AX4] Length = 620 Score = 44.0 bits (102), Expect = 0.025, Method: Composition-based stats. Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 4/41 (9%) Query: 2 SVVTVATWNV--NSI--RARIHNLAAWIKENNPDIICLQET 38 ++T T+NV +S + R L I+ NPD+ICLQE Sbjct: 230 KILTFLTFNVWFDSFLWKQRAERLFKTIESKNPDVICLQEV 270 >gi|251781115|ref|ZP_04824035.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243085430|gb|EES51320.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 262 Score = 44.0 bits (102), Expect = 0.025, Method: Composition-based stats. Identities = 41/266 (15%), Positives = 85/266 (31%), Gaps = 10/266 (3%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYHI 57 + + T N +S + +I LA I EN+ D I LQE ++ + N L+ N+ + Sbjct: 1 MKLLTLNCHSWQEENQIDKIKYLAKTIAENDYDAIALQEVSQSINSNVIKSNLKYDNFAV 60 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 + + I + L + + + + ++ Sbjct: 61 LLKSELDKYNTNYNFFWDFSHIGYEKYEEGLAIFTKHNIVDEKSFFIS-KANDIEYWKTR 119 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 I ++ I + + EEP ++ + + Sbjct: 120 RIVKLTFEYNNENIDIYSCHLGWWEDQEEPFK-CQVKKLLEENTSNNTTFFMGDFNNNAF 178 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 + + L N G D + + + + + +R+D I+ + + +L Sbjct: 179 IRNEGYDYLLNKGLIDTFTISKEADNGITVRGKIDGWDENKEKLRLDLILSNKKL-DVLT 237 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263 S I SDH V VSL++ Sbjct: 238 SKVIFNGI-NKDIISDHYGVEVSLNL 262 >gi|238881455|gb|EEQ45093.1| conserved hypothetical protein [Candida albicans WO-1] Length = 359 Score = 44.0 bits (102), Expect = 0.025, Method: Composition-based stats. Identities = 36/268 (13%), Positives = 80/268 (29%), Gaps = 48/268 (17%) Query: 32 IICLQETKTEDKNFP----FETLQSLNYHIETCGQKSYNGVA--ILSKYQPIEIVTHLPG 85 IICLQE ++ +Q NY+ +G IL K Q +I+ + Sbjct: 108 IICLQEV-LHNQLIDILQGLNDIQEWNYYGVGRTDGEKSGEFAPILYKDQDFKIIENSTF 166 Query: 86 DDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELE 145 + + + + I ++ R S +L ++ Sbjct: 167 WLSPTPHVPSKGWDAALERIVTMVTFQSRLNPEIKFNIFNTHYDHRGVEARRKSSQLIVD 226 Query: 146 EPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY 205 + + + + + + + ++ ++ + + Sbjct: 227 KMKNY--------NDYPSFLCGDFNTEPNDEPYHILTKAGFKDGKILIDKKSAYGFETTF 278 Query: 206 SFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSA------------------------- 239 + +D N+ I RID+I SP T +L ++ Sbjct: 279 TGFD------INNEPISRIDYIW-SPSFTRILSNSNNDTNQDSDDDNDNDESYEVTLKQF 331 Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPR 267 I + SDH PV+ + ++ + + Sbjct: 332 GILSNWFNGHHFSDHRPVVSTYELRKKK 359 >gi|323976824|gb|EGB71912.1| endonuclease/Exonuclease/phosphatase [Escherichia coli TW10509] Length = 253 Score = 44.0 bits (102), Expect = 0.025, Method: Composition-based stats. Identities = 36/267 (13%), Positives = 64/267 (23%), Gaps = 32/267 (11%) Query: 5 TVATWNVN-SI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN--YH 56 V T N++ R + L ++ + DI+CLQE +++ H Sbjct: 11 KVLTINIHKGFTAFNRRFILPELRDAVRTVSADIVCLQEV-MGAHEVHPLHVENWPDTSH 69 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 E ++ A E + +I+ R Sbjct: 70 YEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIEHYENRDVSIDGAEKRGVLYCRIVP 129 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + + R +Q L E + D I D + N Sbjct: 130 PMTGKAIHVMCVHLGLREAHRQAQLAMLAEWVNELPDGEPILVAGDFNDWRQKANHPLKV 189 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 + +R+D I + + Sbjct: 190 QAGLDEIFTRAHGRPARTFPVQFPL-------------------LRLDRIYV----KNAS 226 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263 SA R W SDH P+ + + Sbjct: 227 ASAPTALPLRTWRHLSDHAPLSAEIHL 253 >gi|182683680|ref|YP_001835427.1| hypothetical protein SPCG_0710 [Streptococcus pneumoniae CGSP14] gi|182629014|gb|ACB89962.1| hypothetical protein SPCG_0710 [Streptococcus pneumoniae CGSP14] Length = 249 Score = 44.0 bits (102), Expect = 0.025, Method: Composition-based stats. Identities = 28/250 (11%), Positives = 67/250 (26%), Gaps = 9/250 (3%) Query: 21 LAAWIKENNPDIICLQETK-------TEDKNFPFETLQSLNYHIETCGQKSYNGVAILSK 73 + I E + D+IC QE E + + H + + + K Sbjct: 1 MLEDILEKDYDLICFQEINQEMTSSEVEVNDLYQALPAAEPIHQDHYVRLLVEKLLEQGK 60 Query: 74 YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKR 133 + G D + I + I + + + ++ P + + K Sbjct: 61 NYYWTWAYNHIGYDRYHEGVAILSKTPIEAREILVSDVDDPTDYHTRRVALAETVVDGKE 120 Query: 134 FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTD 193 + ++ ++ + + +G D Sbjct: 121 LAVASVHLSWWDKGFQEEWARFEAVLKKLNKPLLLAGDFNNPAGQEGYQAILASPLGLQD 180 Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253 A + Y+ + +RID++ + E + + + + SD Sbjct: 181 AFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTTKELA--VENLHVVFDGNKSPQVSD 238 Query: 254 HTPVIVSLDI 263 H + L+ Sbjct: 239 HYGLNAILNW 248 >gi|15800541|ref|NP_286553.1| hypothetical protein Z1009 [Escherichia coli O157:H7 EDL933] gi|15830122|ref|NP_308895.1| hypothetical protein ECs0868 [Escherichia coli O157:H7 str. Sakai] gi|16128758|ref|NP_415311.1| conserved protein, endo/exonuclease/phosphatase family PFAM PF03372 [Escherichia coli str. K-12 substr. MG1655] gi|24112158|ref|NP_706668.1| hypothetical protein SF0740 [Shigella flexneri 2a str. 301] gi|26246763|ref|NP_752803.1| hypothetical protein c0873 [Escherichia coli CFT073] gi|30062275|ref|NP_836446.1| hypothetical protein S0781 [Shigella flexneri 2a str. 2457T] gi|74311333|ref|YP_309752.1| hypothetical protein SSON_0769 [Shigella sonnei Ss046] gi|89107641|ref|AP_001421.1| predicted DNase [Escherichia coli str. K-12 substr. W3110] gi|91209822|ref|YP_539808.1| putative DNase [Escherichia coli UTI89] gi|110804791|ref|YP_688311.1| hypothetical protein SFV_0773 [Shigella flexneri 5 str. 8401] gi|168764306|ref|ZP_02789313.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC4501] gi|168787004|ref|ZP_02812011.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC869] gi|168799936|ref|ZP_02824943.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC508] gi|170080449|ref|YP_001729769.1| DNase [Escherichia coli str. K-12 substr. DH10B] gi|170684095|ref|YP_001742893.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli SMS-3-5] gi|191169284|ref|ZP_03031034.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli B7A] gi|193064436|ref|ZP_03045517.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli E22] gi|193069403|ref|ZP_03050358.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli E110019] gi|194428175|ref|ZP_03060718.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli B171] gi|194433120|ref|ZP_03065402.1| endonuclease/exonuclease/phosphatase family protein [Shigella dysenteriae 1012] gi|209918036|ref|YP_002292120.1| endonuclease/exonuclease/phosphatase [Escherichia coli SE11] gi|215485878|ref|YP_002328309.1| predicted DNase [Escherichia coli O127:H6 str. E2348/69] gi|217324324|ref|ZP_03440408.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. TW14588] gi|218553374|ref|YP_002386287.1| putative metal-dependent hydrolase [Escherichia coli IAI1] gi|218557695|ref|YP_002390608.1| metal-dependent hydrolase [Escherichia coli S88] gi|218688576|ref|YP_002396788.1| putative metal-dependent hydrolase [Escherichia coli ED1a] gi|218694264|ref|YP_002401931.1| putative metal-dependent hydrolase [Escherichia coli 55989] gi|218704168|ref|YP_002411687.1| putative metal-dependent hydrolase [Escherichia coli UMN026] gi|227884248|ref|ZP_04002053.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli 83972] gi|237707251|ref|ZP_04537732.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|238900049|ref|YP_002925845.1| putative DNase [Escherichia coli BW2952] gi|256021140|ref|ZP_05435005.1| putative DNase [Shigella sp. D9] gi|256023614|ref|ZP_05437479.1| putative DNase [Escherichia sp. 4_1_40B] gi|260843033|ref|YP_003220811.1| putative DNase [Escherichia coli O103:H2 str. 12009] gi|260866957|ref|YP_003233359.1| putative DNase [Escherichia coli O111:H- str. 11128] gi|261225437|ref|ZP_05939718.1| putative DNase [Escherichia coli O157:H7 str. FRIK2000] gi|261258594|ref|ZP_05951127.1| putative DNase [Escherichia coli O157:H7 str. FRIK966] gi|291281787|ref|YP_003498605.1| hypothetical protein G2583_1018 [Escherichia coli O55:H7 str. CB9615] gi|293404090|ref|ZP_06648084.1| ybhP protein [Escherichia coli FVEC1412] gi|293409167|ref|ZP_06652743.1| ybhP protein [Escherichia coli B354] gi|293414069|ref|ZP_06656718.1| ybhP protein [Escherichia coli B185] gi|293433051|ref|ZP_06661479.1| ybhP protein [Escherichia coli B088] gi|298379871|ref|ZP_06989476.1| ybhP protein [Escherichia coli FVEC1302] gi|300816436|ref|ZP_07096658.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 107-1] gi|300898278|ref|ZP_07116629.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 198-1] gi|300907118|ref|ZP_07124784.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 84-1] gi|300920037|ref|ZP_07136496.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 115-1] gi|300993265|ref|ZP_07180312.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 45-1] gi|301020719|ref|ZP_07184787.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 69-1] gi|301024514|ref|ZP_07188190.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 196-1] gi|301051290|ref|ZP_07198116.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 185-1] gi|301306923|ref|ZP_07212967.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 124-1] gi|307137414|ref|ZP_07496770.1| hypothetical protein EcolH7_04690 [Escherichia coli H736] gi|307313800|ref|ZP_07593417.1| Endonuclease/exonuclease/phosphatase [Escherichia coli W] gi|309797967|ref|ZP_07692346.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 145-7] gi|312969189|ref|ZP_07783396.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia coli 2362-75] gi|331641303|ref|ZP_08342438.1| putative cytoplasmic protein [Escherichia coli H736] gi|331646007|ref|ZP_08347110.1| putative cytoplasmic protein [Escherichia coli M605] gi|331651793|ref|ZP_08352812.1| putative cytoplasmic protein [Escherichia coli M718] gi|331656807|ref|ZP_08357769.1| putative cytoplasmic protein [Escherichia coli TA206] gi|331672300|ref|ZP_08373091.1| putative cytoplasmic protein [Escherichia coli TA280] gi|77416769|sp|P0AAW3|YBHP_ECO57 RecName: Full=Uncharacterized protein ybhP gi|77416770|sp|P0AAW2|YBHP_ECOL6 RecName: Full=Uncharacterized protein ybhP gi|77416771|sp|P0AAW1|YBHP_ECOLI RecName: Full=Uncharacterized protein ybhP gi|77416772|sp|P0AAW4|YBHP_SHIFL RecName: Full=Uncharacterized protein ybhP gi|12513779|gb|AAG55161.1|AE005259_12 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933] gi|26107162|gb|AAN79346.1|AE016757_250 Hypothetical protein ybhP [Escherichia coli CFT073] gi|1787008|gb|AAC73877.1| conserved protein, endo/exonuclease/phosphatase family PFAM PF03372 [Escherichia coli str. K-12 substr. MG1655] gi|4062347|dbj|BAA35449.1| predicted DNase [Escherichia coli str. K12 substr. W3110] gi|13360327|dbj|BAB34291.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai] gi|24050995|gb|AAN42375.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] gi|30040520|gb|AAP16252.1| hypothetical protein S0781 [Shigella flexneri 2a str. 2457T] gi|73854810|gb|AAZ87517.1| conserved hypothetical protein [Shigella sonnei Ss046] gi|91071396|gb|ABE06277.1| putative DNase [Escherichia coli UTI89] gi|110614339|gb|ABF03006.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401] gi|169888284|gb|ACB01991.1| predicted DNase [Escherichia coli str. K-12 substr. DH10B] gi|170521813|gb|ACB19991.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli SMS-3-5] gi|189365678|gb|EDU84094.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC4501] gi|189373043|gb|EDU91459.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC869] gi|189377721|gb|EDU96137.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC508] gi|190900673|gb|EDV60472.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli B7A] gi|192928898|gb|EDV82511.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli E22] gi|192957356|gb|EDV87804.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli E110019] gi|194413735|gb|EDX30014.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli B171] gi|194418617|gb|EDX34704.1| endonuclease/exonuclease/phosphatase family protein [Shigella dysenteriae 1012] gi|209775978|gb|ACI86301.1| hypothetical protein ECs0868 [Escherichia coli] gi|209775980|gb|ACI86302.1| hypothetical protein ECs0868 [Escherichia coli] gi|209775982|gb|ACI86303.1| hypothetical protein ECs0868 [Escherichia coli] gi|209775984|gb|ACI86304.1| hypothetical protein ECs0868 [Escherichia coli] gi|209911295|dbj|BAG76369.1| endonuclease/exonuclease/phosphatase [Escherichia coli SE11] gi|215263950|emb|CAS08290.1| predicted DNase [Escherichia coli O127:H6 str. E2348/69] gi|217320545|gb|EEC28969.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. TW14588] gi|218350996|emb|CAU96700.1| putative metal-dependent hydrolase [Escherichia coli 55989] gi|218360142|emb|CAQ97691.1| putative metal-dependent hydrolase [Escherichia coli IAI1] gi|218364464|emb|CAR02146.1| putative metal-dependent hydrolase [Escherichia coli S88] gi|218426140|emb|CAR06960.1| putative metal-dependent hydrolase [Escherichia coli ED1a] gi|218431265|emb|CAR12143.1| putative metal-dependent hydrolase [Escherichia coli UMN026] gi|222032521|emb|CAP75260.1| Uncharacterized protein ybhP [Escherichia coli LF82] gi|226898461|gb|EEH84720.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|227839000|gb|EEJ49466.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli 83972] gi|238862335|gb|ACR64333.1| predicted DNase [Escherichia coli BW2952] gi|257758180|dbj|BAI29677.1| predicted DNase [Escherichia coli O103:H2 str. 12009] gi|257763313|dbj|BAI34808.1| predicted DNase [Escherichia coli O111:H- str. 11128] gi|260450063|gb|ACX40485.1| Endonuclease/exonuclease/phosphatase [Escherichia coli DH1] gi|281600115|gb|ADA73099.1| Metal-dependent hydrolase [Shigella flexneri 2002017] gi|284920642|emb|CBG33705.1| putative endonuclease/exonuclease/phosphatase [Escherichia coli 042] gi|290761660|gb|ADD55621.1| hypothetical protein G2583_1018 [Escherichia coli O55:H7 str. CB9615] gi|291323870|gb|EFE63292.1| ybhP protein [Escherichia coli B088] gi|291428676|gb|EFF01701.1| ybhP protein [Escherichia coli FVEC1412] gi|291434127|gb|EFF07100.1| ybhP protein [Escherichia coli B185] gi|291469635|gb|EFF12119.1| ybhP protein [Escherichia coli B354] gi|294491262|gb|ADE90018.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli IHE3034] gi|298279569|gb|EFI21077.1| ybhP protein [Escherichia coli FVEC1302] gi|299880367|gb|EFI88578.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 196-1] gi|300297049|gb|EFJ53434.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 185-1] gi|300358067|gb|EFJ73937.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 198-1] gi|300398530|gb|EFJ82068.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 69-1] gi|300401163|gb|EFJ84701.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 84-1] gi|300406673|gb|EFJ90211.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 45-1] gi|300412984|gb|EFJ96294.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 115-1] gi|300531126|gb|EFK52188.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 107-1] gi|300837849|gb|EFK65609.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 124-1] gi|306906440|gb|EFN36954.1| Endonuclease/exonuclease/phosphatase [Escherichia coli W] gi|307552635|gb|ADN45410.1| endonuclease/exonuclease/phosphatase family [Escherichia coli ABU 83972] gi|307627800|gb|ADN72104.1| hypothetical protein UM146_13695 [Escherichia coli UM146] gi|308118455|gb|EFO55717.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 145-7] gi|309701068|emb|CBJ00366.1| putative endonuclease/exonuclease/phosphatase [Escherichia coli ETEC H10407] gi|312286591|gb|EFR14504.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia coli 2362-75] gi|312945308|gb|ADR26135.1| putative DNase [Escherichia coli O83:H1 str. NRG 857C] gi|313650312|gb|EFS14724.1| endonuclease/Exonuclease/phosphatase family protein [Shigella flexneri 2a str. 2457T] gi|315060026|gb|ADT74353.1| predicted DNase [Escherichia coli W] gi|315135440|dbj|BAJ42599.1| hypothetical protein ECDH1ME8569_0743 [Escherichia coli DH1] gi|315257776|gb|EFU37744.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 85-1] gi|315287185|gb|EFU46597.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 110-3] gi|315292598|gb|EFU51950.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 153-1] gi|315619791|gb|EFV00310.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia coli 3431] gi|320178501|gb|EFW53466.1| Endonuclease/Exonuclease/phosphatase family protein [Shigella boydii ATCC 9905] gi|320192735|gb|EFW67376.1| Endonuclease/Exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC1212] gi|320196715|gb|EFW71338.1| Endonuclease/Exonuclease/phosphatase family protein [Escherichia coli WV_060327] gi|320637652|gb|EFX07444.1| hypothetical protein ECO5101_22645 [Escherichia coli O157:H7 str. G5101] gi|320642778|gb|EFX11979.1| hypothetical protein ECO9389_02401 [Escherichia coli O157:H- str. 493-89] gi|320648234|gb|EFX16889.1| hypothetical protein ECO2687_18506 [Escherichia coli O157:H- str. H 2687] gi|320659694|gb|EFX27250.1| hypothetical protein ECO5905_24328 [Escherichia coli O55:H7 str. USDA 5905] gi|320664164|gb|EFX31315.1| hypothetical protein ECOSU61_00998 [Escherichia coli O157:H7 str. LSU-61] gi|323159720|gb|EFZ45698.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia coli E128010] gi|323165708|gb|EFZ51494.1| endonuclease/Exonuclease/phosphatase family protein [Shigella sonnei 53G] gi|323172094|gb|EFZ57733.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia coli LT-68] gi|323175592|gb|EFZ61187.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia coli 1180] gi|323185054|gb|EFZ70420.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia coli 1357] gi|323190916|gb|EFZ76183.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia coli RN587/1] gi|323379415|gb|ADX51683.1| Endonuclease/exonuclease/phosphatase [Escherichia coli KO11] gi|323938145|gb|EGB34405.1| endonuclease/Exonuclease/phosphatase [Escherichia coli E1520] gi|323942663|gb|EGB38828.1| endonuclease/Exonuclease/phosphatase [Escherichia coli E482] gi|323947052|gb|EGB43065.1| endonuclease/Exonuclease/phosphatase [Escherichia coli H120] gi|323953547|gb|EGB49413.1| endonuclease/Exonuclease/phosphatase [Escherichia coli H252] gi|323958079|gb|EGB53788.1| endonuclease/Exonuclease/phosphatase [Escherichia coli H263] gi|323971955|gb|EGB67176.1| endonuclease/Exonuclease/phosphatase [Escherichia coli TA007] gi|324009624|gb|EGB78843.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 57-2] gi|324018520|gb|EGB87739.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 117-3] gi|324116214|gb|EGC10136.1| endonuclease/Exonuclease/phosphatase [Escherichia coli E1167] gi|326338324|gb|EGD62153.1| Endonuclease/Exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. 1125] gi|326346302|gb|EGD70040.1| Endonuclease/Exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. 1044] gi|330910533|gb|EGH39043.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia coli AA86] gi|331038101|gb|EGI10321.1| putative cytoplasmic protein [Escherichia coli H736] gi|331044759|gb|EGI16886.1| putative cytoplasmic protein [Escherichia coli M605] gi|331050071|gb|EGI22129.1| putative cytoplasmic protein [Escherichia coli M718] gi|331055055|gb|EGI27064.1| putative cytoplasmic protein [Escherichia coli TA206] gi|331070495|gb|EGI41859.1| putative cytoplasmic protein [Escherichia coli TA280] gi|332091084|gb|EGI96174.1| endonuclease/Exonuclease/phosphatase family protein [Shigella dysenteriae 155-74] gi|332104718|gb|EGJ08064.1| conserved hypothetical protein [Shigella sp. D9] Length = 253 Score = 44.0 bits (102), Expect = 0.025, Method: Composition-based stats. Identities = 34/267 (12%), Positives = 64/267 (23%), Gaps = 32/267 (11%) Query: 5 TVATWNVN-SI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN--YH 56 V T N++ R + L ++ + DI+CLQE +++ H Sbjct: 11 KVLTINIHKGFTAFNRRFILPELRDAVRTVSADIVCLQEV-MGAHEVHPLHVENWPDTSH 69 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 E ++ A E + +++ R Sbjct: 70 YEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVP 129 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + + R +Q L E + D + D + N Sbjct: 130 PMTGKAIHVMCVHLGLREAHRQAQLAMLAEWVNELPDGEPVLVAGDFNDWRQKANHPLKV 189 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 + +R+D I + + Sbjct: 190 QAGLDEIFTRAHGRPARTFPVQFPL-------------------LRLDRIYV----KNAS 226 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263 SA R W SDH P+ + + Sbjct: 227 ASAPTALPLRTWRHLSDHAPLSAEIHL 253 >gi|239942130|ref|ZP_04694067.1| endonuclease/exonuclease/phosphatase family protein [Streptomyces roseosporus NRRL 15998] gi|239988594|ref|ZP_04709258.1| endonuclease/exonuclease/phosphatase family protein [Streptomyces roseosporus NRRL 11379] gi|291445578|ref|ZP_06584968.1| endonuclease/exonuclease/phosphatase family protein [Streptomyces roseosporus NRRL 15998] gi|291348525|gb|EFE75429.1| endonuclease/exonuclease/phosphatase family protein [Streptomyces roseosporus NRRL 15998] Length = 332 Score = 44.0 bits (102), Expect = 0.026, Method: Composition-based stats. Identities = 39/295 (13%), Positives = 79/295 (26%), Gaps = 49/295 (16%) Query: 2 SVVTVATWNV--------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 S + V T N+ + + L A IK++ PD++ LQET + E + L Sbjct: 49 SELRVMTLNLWHGGDRVDDGL---AKQL-AVIKKHRPDVVGLQET---SGHSAREIAEEL 101 Query: 54 NYHIE--------TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT 105 + + V + I Sbjct: 102 GWDHWQSDADLGIISRFPFTSEVETSQAAAGVRIRIDEATGQEVELWTAHLGYDPYGPYD 161 Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII-PQPHDCY 164 + + + + E P++ GD+N Sbjct: 162 ACFDRMPVEEIFRREAESGRTPQAEAIAKDLAPKIAAADETPVLLVGDFNTPSHLDWTEA 221 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH---HLYSFWDYYADSWSKNKGI 221 + + + G D+ R + ++ + + K++G Sbjct: 222 TKDSHCG---YGQVDWPVTKIFEKAGLKDSFREANPDPAAVPGNTW----SPVYPKHEGS 274 Query: 222 --------RIDHI-MLSPEATSLLHSARIDTKPR------GWTKPSDHTPVIVSL 261 RID I + + T + ++ P+ G P+DH V+ + Sbjct: 275 TGVDEPQDRIDFIDYVGDKLTVKDSVSFVEGDPKPVPDQAGNAWPTDHAAVLTTF 329 >gi|114608811|ref|XP_001151814.1| PREDICTED: sphingomyelin phosphodiesterase 2, neutral membrane (neutral sphingomyelinase) isoform 1 [Pan troglodytes] Length = 394 Score = 44.0 bits (102), Expect = 0.026, Method: Composition-based stats. Identities = 37/276 (13%), Positives = 82/276 (29%), Gaps = 30/276 (10%) Query: 18 IHNLAAWIKENNPDIICLQETKT-EDKNFPFETLQS-LNYHIETCGQKSYNGVAILSKYQ 75 + L ++ + + D+ L+E + +D + + L +G+ + SK+ Sbjct: 1 MRRLGDFLNQESFDLALLEEVWSEQDFQYLRQKLSPTYPAAHHFRSGIIGSGLCVFSKHP 60 Query: 76 PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN-----------LYLPHGNPITSTKY 124 E+ H+ + F+ L + + N Sbjct: 61 IQELTQHIYTLNGYPYMIHHGDWFSGKAVGLLVLHLSGMVLNAYVTHLHAEYNRRKDIYL 120 Query: 125 DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ 184 +++ +F + + ++ GD N+ P+ C W LE R Sbjct: 121 AHRVAQAWELAQFIHHTSKKADVVLLCGDLNMHPEDLGCCLLKEWTGLHDAYLETRDFKG 180 Query: 185 KLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT- 243 + G+RID+++ + S + Sbjct: 181 SEEGNTMVPKNCYVSQQEL-----------KPFPFGVRIDYVLY-KAVSGFYISCKSLET 228 Query: 244 ----KPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTS 275 P T SDH ++ +L + +Q S++ Sbjct: 229 TTGFDPHSGTPLSDHEALMATLFVRHSPPQQNPSST 264 >gi|147797881|emb|CAN63072.1| hypothetical protein VITISV_025643 [Vitis vinifera] Length = 740 Score = 44.0 bits (102), Expect = 0.026, Method: Composition-based stats. Identities = 10/61 (16%), Positives = 23/61 (37%), Gaps = 9/61 (14%) Query: 201 THHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 +++ + N+ R+D ++SP ++ R SDH P+++ Sbjct: 646 QGGEFTW-----NGGLNNQVWARLDRFLVSPSWLDQFSGV---SQSRLSRPISDHFPIVL 697 Query: 260 S 260 Sbjct: 698 E 698 >gi|162455565|ref|YP_001617933.1| hypothetical protein sce7284 [Sorangium cellulosum 'So ce 56'] gi|161166147|emb|CAN97452.1| hypothetical protein sce7284 [Sorangium cellulosum 'So ce 56'] Length = 354 Score = 44.0 bits (102), Expect = 0.026, Method: Composition-based stats. Identities = 35/307 (11%), Positives = 78/307 (25%), Gaps = 47/307 (15%) Query: 4 VTVATWNV----NSIR------ARIHNLAAWIKENNP--DIICLQETKTE---------- 41 + + ++NV + R A I +A + +P D++CLQE +T+ Sbjct: 45 LRIVSYNVRYFGHGTRGIASTSAAITRIATTLARMSPLPDLVCLQEVETQSLRSSTMNPR 104 Query: 42 ----DKNFPFETLQ-------------SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLP 84 + + + Y+ + + I + + Sbjct: 105 WHPEETQLDRLMTELHAALAQAQRRERYVAYYFPAHTYRLTSRTNIYTTGLAVLARDTFH 164 Query: 85 GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL 144 + + + + +D + + F+ + Sbjct: 165 IGHHNAERPHDITHRRGVKSLKQTRICAHVSFEHESGQSFDVFNTHLSLPSVFSREFWTG 224 Query: 145 EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL 204 E + F + + + +D + S F D Sbjct: 225 EARMGFGPNQIEEARVLADFVRRERRSDNFVVVGDFNSLPGSPVDRFLREEIGFVDAFAK 284 Query: 205 YSFWD-YYADSWSK----NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP--SDHTPV 257 + A ++ N + +DH+ S L SDH P+ Sbjct: 285 VRCFSETEARAFPTAGFMNLRMHLDHVYSSERL-QWLDFTGTHPFGHKGAFAGLSDHVPL 343 Query: 258 IVSLDIP 264 I +P Sbjct: 344 IARCRLP 350 >gi|126733500|ref|ZP_01749247.1| hypothetical protein RCCS2_05074 [Roseobacter sp. CCS2] gi|126716366|gb|EBA13230.1| hypothetical protein RCCS2_05074 [Roseobacter sp. CCS2] Length = 306 Score = 44.0 bits (102), Expect = 0.026, Method: Composition-based stats. Identities = 41/288 (14%), Positives = 76/288 (26%), Gaps = 42/288 (14%) Query: 2 SVVTVATWNVNSI---R---ARIHNLAAW----------IKENNPDIICLQETKTEDKNF 45 + + VAT+NV+ I R A ++ W + D+I QE Sbjct: 39 NTLRVATYNVHYIILGRETGAW--SVGDWERRKTPFNLAFNAVDADVIGFQE-------- 88 Query: 46 PFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI-NTQ 104 ++S + + + + V + T+ + Sbjct: 89 ----MESFGRGSGGRINLTLDWLLENNPDYAAAAVGDPAAFPSTQPILYRSDRLTLLDDG 144 Query: 105 TLRIGNLYLPHGNPITSTKYD-DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 + + + + R + +A N I Sbjct: 145 WFFFSDTPDVIYSRTFNGSFPAFTSWAQFRDNTSGEIFRVINLHTDYASRSNRIQSIELV 204 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI-- 221 + I A + + F G +F ++ N+GI Sbjct: 205 ADRI-----APWMADNETLFVIGDFNGRIGDTVVNILADKGLNFAPVQGSTFHFNRGINL 259 Query: 222 --RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPR 267 IDHI S L+ + + P+DH PVI + R Sbjct: 260 FGAIDHI-ASTGNAQLIGQPIVLRRKFAGEWPTDHYPVIADYRLGPSR 306 >gi|125543950|gb|EAY90089.1| hypothetical protein OsI_11658 [Oryza sativa Indica Group] Length = 523 Score = 44.0 bits (102), Expect = 0.026, Method: Composition-based stats. Identities = 41/251 (16%), Positives = 75/251 (29%), Gaps = 16/251 (6%) Query: 16 ARIHNLAAWIKENNPDIICLQETKTEDKN---FPFETLQSLNY-HIETCGQKSYNGVAIL 71 AR ++A ++E D++ LQ + E+ E + L ++ G A+L Sbjct: 245 ARRRSVAEALREAGADMVALQNVRAEEGRGMRPLSELAEGLGMRYVFAESWAPEYGNAVL 304 Query: 72 SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWI 131 S++ D D + + + +L H + K D I Sbjct: 305 SRWPIKRWNARRLADHFDFRNVMRATIEVPGAGEVNLYCTHLDHLDEGLRMKQVDSILRF 364 Query: 132 KRFLRFASQR--LELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNM 189 L+ A + I + H+ +++ L+ ++ Sbjct: 365 ADGHHHILAGGLNALDASDYSADRWAAIAKYHEEIGKPPPKSEVMRHLKAKRYVDAKDFA 424 Query: 190 GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT 249 G DA D G R+D+I+ SP + Sbjct: 425 GGRDAGLVVVPNGQ-----DVQGTCK---YGTRVDYILASPNSPYSFVPGS--YAVVPSM 474 Query: 250 KPSDHTPVIVS 260 SDH V+V Sbjct: 475 GTSDHHIVMVD 485 >gi|312958184|ref|ZP_07772707.1| endonuclease/exonuclease/phosphatase [Pseudomonas fluorescens WH6] gi|311287615|gb|EFQ66173.1| endonuclease/exonuclease/phosphatase [Pseudomonas fluorescens WH6] Length = 292 Score = 44.0 bits (102), Expect = 0.026, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 14/59 (23%) Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 +F + +DHI+LSP T L S ++ P SDH PV V + +P Sbjct: 228 TFPSWRPQ-------RCLDHILLSPTLT--LESVQVLAHP-----ISDHLPVAVEIRLP 272 >gi|149279437|ref|ZP_01885567.1| hypothetical protein PBAL39_16596 [Pedobacter sp. BAL39] gi|149229730|gb|EDM35119.1| hypothetical protein PBAL39_16596 [Pedobacter sp. BAL39] Length = 294 Score = 44.0 bits (102), Expect = 0.026, Method: Composition-based stats. Identities = 26/240 (10%), Positives = 64/240 (26%), Gaps = 15/240 (6%) Query: 22 AAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80 A ++ + D+ +QE K + + + +Y K + + + + Sbjct: 64 ANLLRFHQYDVFGVQEAFKNQVDDLQRLLPEYDHYGAGRDDGKDGGEHSTVFYRKDKFKL 123 Query: 81 THLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQ 140 L + RI + Y + Sbjct: 124 IKKGDFWLSENPDRPGLGWDATCCN-RICSYVCLQDLKTGKQFYFFNAHFDHE----GKI 178 Query: 141 RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHD 200 LI + +I + + + + + L++ ++ Sbjct: 179 ARVESSKLIISKIRSIAGKLPAIFTGDLNGGHSSEWYLTLANSGFLKDTYGQVKFPYANN 238 Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 ++ + + + IDH+ ++ + T + T SDH PV+V Sbjct: 239 AS-----FNAFGKALEGKEI--IDHVFVTKDFT--AKRWGLLTDTYHGKFISDHFPVLVD 289 >gi|320166045|gb|EFW42944.1| predicted protein [Capsaspora owczarzaki ATCC 30864] Length = 1251 Score = 44.0 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 10/46 (21%), Positives = 21/46 (45%), Gaps = 13/46 (28%) Query: 4 VTVATWNVNSI-----------RARIHNLAAWIKENNPDIICLQET 38 + + T+NV + + R + A+++ + D+I LQE Sbjct: 285 LKIVTFNV--LFDVYQPELIHTKERTPRMLAFLESLDADVIALQEV 328 >gi|212545554|ref|XP_002152931.1| hypothetical protein PMAA_007610 [Penicillium marneffei ATCC 18224] gi|210065900|gb|EEA19994.1| hypothetical protein PMAA_007610 [Penicillium marneffei ATCC 18224] Length = 317 Score = 44.0 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 19/58 (32%), Gaps = 4/58 (6%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 ID ++ S E + I G SDH + DI P + + P Sbjct: 198 IDLVLASTELAEEMVKYGIHYTNHG----SDHQAIETEFDISVPDRPITERLLWKNAP 251 >gi|196046040|ref|ZP_03113268.1| putative secreted protein [Bacillus cereus 03BB108] gi|196023095|gb|EDX61774.1| putative secreted protein [Bacillus cereus 03BB108] Length = 264 Score = 44.0 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 41/278 (14%), Positives = 78/278 (28%), Gaps = 35/278 (12%) Query: 3 VVTVATWNV-N--SI-RARIHNLAAWIKENNPDIICLQETKT-----EDKNFPFETLQSL 53 ++ +AT+N+ N S+ R+ + I+ +P I+ LQE ++ KN + Sbjct: 7 ILRIATFNIWNHESLWFERLEAICEEIRSISPHILALQEVRSSVNLNSKKNVAQYIAGRI 66 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 Y + + L+ I I ++ + E+ + T Sbjct: 67 GYPFCIFKEYPDSPDEGLAFLSKIPI----IAEEAIWETDIEESNYCAIRITFTYKGCKF 122 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 N + K + + + L+ + Y D Sbjct: 123 GVTNVHLNWKSSRIRQEQMNTVNNWIENRASDYELLCGDFNDDPFSMVHQYLIRKHWIDV 182 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 E+ ++ + + D R D IM+ A Sbjct: 183 AQFKEIEENMIAQPTLDYRKNPNLKDDVKQE----------------KRYDWIMIQENAA 226 Query: 234 ---SLLHSARIDTK---PRGWTKPSDHTPVIVSLDIPE 265 + + I + PSDH V V L E Sbjct: 227 FEFPTIENVSIFGESALTSTGMFPSDHYGVFVDLKFNE 264 >gi|126728921|ref|ZP_01744736.1| endonuclease/exonuclease/phosphatase family protein [Sagittula stellata E-37] gi|126710851|gb|EBA09902.1| endonuclease/exonuclease/phosphatase family protein [Sagittula stellata E-37] Length = 333 Score = 44.0 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 12/53 (22%) Query: 223 IDHIMLSPEATSLLHSARIDT---KPRGWTKP---------SDHTPVIVSLDI 263 +D++M+SP+ + RI PR W P SDH PV + L+I Sbjct: 281 LDYVMVSPDLMARQPDWRIWHPFDNPRCWRDPALREALLTASDHFPVTLDLEI 333 >gi|301610412|ref|XP_002934749.1| PREDICTED: protein angel homolog 2 [Xenopus (Silurana) tropicalis] Length = 526 Score = 44.0 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 5/46 (10%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIET 59 R+ N+ + + N DI+CLQE ++ ++ + L+SL YH E Sbjct: 189 RLPNILKELVDMNADILCLQEV--QEDHYTTQIKPSLESLGYHCEY 232 >gi|296103284|ref|YP_003613430.1| endonuclease/exonuclease/phosphatase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295057743|gb|ADF62481.1| endonuclease/exonuclease/phosphatase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 253 Score = 44.0 bits (102), Expect = 0.027, Method: Composition-based stats. Identities = 31/268 (11%), Positives = 62/268 (23%), Gaps = 32/268 (11%) Query: 4 VTVATWNVN-SI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN--Y 55 + V T N++ R + L ++ + DI+CLQE ++ Sbjct: 10 LKVLTINIHKGFTAFNRRFILPELRDAVRTVSADIVCLQEV-MGAHEVHPMHFENWPDTP 68 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 H E ++ A E + ++ R Sbjct: 69 HYEFLADTMWSDYAYGRNAVYPEGHHGNAVLSRYPIEHYENRDVSVGESEKRGLLYCRIA 128 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + + + R +Q L E + + D + N Sbjct: 129 PPDLDFPVHVGCVHLGLREAHRQAQLQMLAEWTNALPEGEPVVIAGDFNDWRQRANHPLK 188 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 + + +R+D I + S Sbjct: 189 VEAGLEEIFTRAHGRPARTFPVRFPL-------------------LRLDRIYVKNAHASS 229 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + W SDH P+ + + Sbjct: 230 PTA----LALLNWRHLSDHAPLSAEIHL 253 >gi|118587710|ref|ZP_01545120.1| Endonuclease/exonuclease/phosphatase [Stappia aggregata IAM 12614] gi|118439332|gb|EAV45963.1| Endonuclease/exonuclease/phosphatase [Stappia aggregata IAM 12614] Length = 320 Score = 43.6 bits (101), Expect = 0.027, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 20/65 (30%), Gaps = 7/65 (10%) Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 S W + G+ +DH + + + G SDH PV + E Sbjct: 263 SRWTPTWLAPVPGIGLELDHFFVKDGLA--VKNCE-----LGHFNGSDHWPVFAEFTLAE 315 Query: 266 PRKKQ 270 + Sbjct: 316 GKPSD 320 >gi|291239603|ref|XP_002739715.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii] Length = 563 Score = 43.6 bits (101), Expect = 0.027, Method: Composition-based stats. Identities = 41/286 (14%), Positives = 78/286 (27%), Gaps = 40/286 (13%) Query: 7 ATWNV---NSI---------RARIHNLAAWIKENNPDIICLQETKTEDK--------NFP 46 A++N+ NS R RI +L + +++ DI+ QE + + + Sbjct: 278 ASYNIWNFNSFVEDNHKEYER-RILHLGEIVSQSDSDIVSFQEVRFDLEKSGELGPFQVQ 336 Query: 47 FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 +L NY ++ + + I + P D A+ + Sbjct: 337 HLSLALPNYQFIYQPAMTFMDNIFGRTEEGLAIFSKFPIKSHDFILLSRNASDPNDFHQR 396 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRF-----ASQRLELEEPLIFAGDYNIIPQPH 161 + + ++ +S + + P + GD N P Sbjct: 397 ICIHAEIEFPVFGMIHVFNTHLSLSEDARDRTVVEIWEFMQKFTGPALLMGDLNAEPHEK 456 Query: 162 DCY----NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK 217 I + K RA H ++ S Sbjct: 457 SIKFLTGQAEINGVQTKGLYDAWTLQHKEPRSAKLGLYRANEKRDHGLTWSTIKPQLVS- 515 Query: 218 NKGIRIDHIMLSPEATSLLHSARI---DTKPRGWTKPSDHTPVIVS 260 RID+I + + I D R SDH ++ + Sbjct: 516 ----RIDYIFV--RLPKDIQLHNISLLDDGKRKHFAASDHLGLLAT 555 >gi|226372700|gb|ACO51975.1| LINE-1 reverse transcriptase homolog [Rana catesbeiana] Length = 173 Score = 43.6 bits (101), Expect = 0.027, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 21/43 (48%), Gaps = 2/43 (4%) Query: 1 MSVVTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTE 41 M+ V + ++NV + A+ H + +K+ I LQET Sbjct: 1 MARVKIVSYNVRGLNVAAKRHQVYRELKQATCSIAFLQETHLT 43 >gi|126657241|ref|ZP_01728407.1| hypothetical protein CY0110_24971 [Cyanothece sp. CCY0110] gi|126621512|gb|EAZ92223.1| hypothetical protein CY0110_24971 [Cyanothece sp. CCY0110] Length = 652 Score = 43.6 bits (101), Expect = 0.027, Method: Composition-based stats. Identities = 15/85 (17%), Positives = 33/85 (38%), Gaps = 11/85 (12%) Query: 200 DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS----ARIDTKPRGWTKPSDHT 255 Y++ +N ++D+I++S + S ++ SDH Sbjct: 349 PPSDRYTY-------EFRNNLQQLDYILVSDNLFTTGKSQFDIVHVNVNQPSNLALSDHD 401 Query: 256 PVIVSLDIPEPRKKQQDSTSQNMKP 280 PV+ +P+ + TS+++ P Sbjct: 402 PVLAQFTLPKRVTTPEKPTSESIFP 426 >gi|262383373|ref|ZP_06076509.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|262294271|gb|EEY82203.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] Length = 246 Score = 43.6 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 33/262 (12%), Positives = 68/262 (25%), Gaps = 49/262 (18%) Query: 4 VTVATWNVN-SI----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 + + ++N+ I + + +A I + PD + LQE Sbjct: 26 LRIMSYNIRIGIGMDQQTNLKRIAEVINKVQPDYVGLQEV-----------------DSV 68 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 N A L++ + + + + I P Sbjct: 69 CERSGWINQYAELARLTGMYPIFAPATERSKGLYGIAALSRKKPRSYQYIP--LPGKEEP 126 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 T + + L + +P E D+ Sbjct: 127 RTFLCLEYPNYTLCNTHFSLDPDSRLASIRLINETMTSENKPILITGDFNMEPDSKEFKA 186 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 ++Q+++ L + + + H +R+D+I L H Sbjct: 187 MKQTWRLLSD-PTLETYPSDHPR-------------------LRLDYIF-----GDLKHE 221 Query: 239 ARIDTKPRGWTKPSDHTPVIVS 260 RI + SDH P+ + Sbjct: 222 FRIINDQVIDIQSSDHLPIYID 243 >gi|289207222|ref|YP_003459288.1| endonuclease/exonuclease/phosphatase [Thioalkalivibrio sp. K90mix] gi|288942853|gb|ADC70552.1| Endonuclease/exonuclease/phosphatase [Thioalkalivibrio sp. K90mix] Length = 290 Score = 43.6 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 7/44 (15%) Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPR 267 DHI+L+P+ + R+ SDH PV + +++P + Sbjct: 245 DHILLTPDL--HVSDMRVYNVAL-----SDHLPVGIEIELPAAQ 281 >gi|325300418|ref|YP_004260335.1| Endonuclease/exonuclease/phosphatase [Bacteroides salanitronis DSM 18170] gi|324319971|gb|ADY37862.1| Endonuclease/exonuclease/phosphatase [Bacteroides salanitronis DSM 18170] Length = 283 Score = 43.6 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 37/267 (13%), Positives = 73/267 (27%), Gaps = 25/267 (9%) Query: 7 ATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57 AT+N+ N+ + R + +I+ + DI+ +QE + Y Sbjct: 28 ATFNIRYDNPADQSNNWQFRKDTVTRFIQAQDMDIVGMQEV--LHNQLEDLLQRLPGYKS 85 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFI--EATFTINTQTLRIGNLYLPH 115 G+ + E + + +++ + RI Sbjct: 86 IGVGRDDGKTKGEYAPILYKEDRFEVLDSNTFWLSQYPDSIGFIGWDGACTRIATWAKMK 145 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + E L+ I + + Sbjct: 146 DRQSGKIF-----MAVNTHFDHVGVTARREGALLIIRKIKEIVGDRPAVLTGDF--NVND 198 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E ++ + A A T Y+F + + +ID I ++P+ Sbjct: 199 QSEAYRTITSNAFVLKDAAKIAGKQTGVDYTFHN--FGQIPSEQCEKIDFIFVTPQI--K 254 Query: 236 LHSARIDTK-PRGWTKPSDHTPVIVSL 261 + + I + G SDH P IV L Sbjct: 255 VLDSFIPKEAAPGSKFLSDHNPQIVHL 281 >gi|260888950|ref|ZP_05900213.1| hypothetical protein GCWU000323_00109 [Leptotrichia hofstadii F0254] gi|260861397|gb|EEX75897.1| putative endonuclease/exonuclease/phosphatase [Leptotrichia hofstadii F0254] Length = 244 Score = 43.6 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 28/251 (11%), Positives = 61/251 (24%), Gaps = 39/251 (15%) Query: 15 RARIH--NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILS 72 R+ H + +I + PDI+ L E L + Sbjct: 29 RSVRHVYRIGKFINKYKPDIVGLVEV-------------DLG---SFRMYSKNQATLLGR 72 Query: 73 KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIK 132 + + + +D + + L D + + Sbjct: 73 ITRNNNVYQYKYEEDSNYMKFPMVRKQGNA-------ILSKKPVLREEFHYLDIGMKKLI 125 Query: 133 RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192 + + L + + + ++ M Sbjct: 126 IEVETEDIVVFLVHLALGGKTRQKQIVQLYNFVKNCKKPVIVAGDFNVFWGEEEIEMFLQ 185 Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPS 252 + + +F + N +D I+ S E + S + T+ S Sbjct: 186 ASNLQNINIRKEPTFPSW-------NPKRELDFILCSKEI--KVKSYEVI-----QTQLS 231 Query: 253 DHTPVIVSLDI 263 DH P++V +I Sbjct: 232 DHLPILVDFEI 242 >gi|223674122|pdb|3G6S|A Chain A, Crystal Structure Of The EndonucleaseEXONUCLEASEPHOSPHATASE (BVU_0621) FROM Bacteroides Vulgatus. Northeast Structural Genomics Consortium Target Bvr56d Length = 267 Score = 43.6 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 39/269 (14%), Positives = 82/269 (30%), Gaps = 27/269 (10%) Query: 7 ATWNV------NSIRA---RIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYH 56 AT+N+ +S+ R + +IK++ DI+ QE + ++ + Sbjct: 7 ATFNIRYDNPQDSLNNWQYRKDRVCQFIKDHELDIVGXQEVLHNQFQDLRAGLPEYDGIG 66 Query: 57 IETCGQKSYNGVA-ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + K+ A + + E++ + + + + Sbjct: 67 VGRDDGKTAGEYAPLFYRKDKYEVLDSNTFWLAENPDSVGXXGWDAVCVRIATWAKFKDK 126 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + + R S L + + G+ DA Sbjct: 127 ATGKIFXAVNTHFDHVGEEARRQSALLIIRKIKEIVGER------PAVVTGDFNVTDASD 180 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDY-YADSWSKNKGIRIDHIMLSPEATS 234 E + + + + A R T Y+F D+ + K ID I ++P+ Sbjct: 181 AYETITTNEFVXKDAYKTAARV---TGVDYTFHDFARIPAEDCEK---IDFIFVTPQVL- 233 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + S I + SDH P + L++ Sbjct: 234 -VKSCEIPAEVPEAL-LSDHNPQLADLEL 260 >gi|254255473|ref|ZP_04948789.1| Metal-dependent hydrolase [Burkholderia dolosa AUO158] gi|124901210|gb|EAY71960.1| Metal-dependent hydrolase [Burkholderia dolosa AUO158] Length = 401 Score = 43.6 bits (101), Expect = 0.028, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 7/41 (17%) Query: 4 VTVATWNVNS------IRARIHNLAAWIKENNPDIICLQET 38 + +AT+N+ + A +AA I+E + D+I LQE Sbjct: 167 LRIATYNIGGGYGTWSVPAA-DRIAAVIEELDADVIALQEV 206 >gi|311696215|gb|ADP99088.1| endonuclease/exonuclease/phosphatase [marine bacterium HP15] Length = 286 Score = 43.6 bits (101), Expect = 0.029, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 11/49 (22%) Query: 221 IR----IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 R +DHI++SP + + + + P SDH P+ + + +PE Sbjct: 239 WRPEKALDHILVSPSLE--IRRSEVVSYPM-----SDHLPIAMDVALPE 280 >gi|313610961|gb|EFR85889.1| endonuclease/exonuclease/phosphatase family protein [Listeria monocytogenes FSL F2-208] Length = 273 Score = 43.6 bits (101), Expect = 0.029, Method: Composition-based stats. Identities = 36/272 (13%), Positives = 70/272 (25%), Gaps = 26/272 (9%) Query: 2 SVVTVATWNVN---------SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52 + +V T+N+ S R + + + D + ++E + + + Sbjct: 17 KMFSVTTFNIRFDDTSERKKSWELRKTLTKSLLDKYQWDFMGVEE-PLLPQMLDMKAMLD 75 Query: 53 LNYH-IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 +Y + + + L T + + Sbjct: 76 WDYFGVGRDDGLEKGEFTAVFYNSTRFTLLQEGHFWLSDTPDVPSIHSTAMFPRICVWGE 135 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 + + FASQ L + I II + N Sbjct: 136 FADSDGKQFYIFNTHLDHISEEARLFASQLLLKKAATIAKDSPVIILGDFNTQPNTPTYN 195 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 + Q + G T + H +N+ +ID+I +S E Sbjct: 196 YITEKYQDAQLISQKPAKGPTGSFHDFHPL-------------RPENELEKIDYIFVSNE 242 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + + SDH PV +LD Sbjct: 243 F--QVSTYETIVDEVEGFSASDHFPVTANLDW 272 >gi|294643629|ref|ZP_06721431.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CC 2a] gi|294808048|ref|ZP_06766821.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides xylanisolvens SD CC 1b] gi|292641006|gb|EFF59222.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CC 2a] gi|294444689|gb|EFG13383.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides xylanisolvens SD CC 1b] Length = 297 Score = 43.6 bits (101), Expect = 0.029, Method: Composition-based stats. Identities = 31/265 (11%), Positives = 69/265 (26%), Gaps = 25/265 (9%) Query: 4 VTVATWNVN-----SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 + VAT+N+ R +A I++ + +I +E + + Q + + Sbjct: 53 MRVATYNLQVETGTGWTNRRERVAQLIRDYDFEICGFEE--ASWEQRSYLGTQLASDYQI 110 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + + + LD + T I + N Sbjct: 111 LAYGRDTGNDDNKAGEMSGILYKKSRYTLLDAGRFWFSETPEIPSNGWDETNFKRFCVWG 170 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 K ++ + + + + + N E Sbjct: 171 KFKDSKTQKEFYLFETHMPLADNARKHACQMLVDAVSDKAKDNTPAFCTGDFNATPDAPE 230 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 + + A L++F RID I + Sbjct: 231 IAT-TICQSGILKDAYREAAVQHGALFTFPSKKT---------RIDFIFV--------KH 272 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263 A + + + SDH P+++ ++I Sbjct: 273 ATVLSTRTIVSSLSDHYPMVIVVEI 297 >gi|241841265|ref|XP_002415328.1| conserved hypothetical protein [Ixodes scapularis] gi|215509540|gb|EEC18993.1| conserved hypothetical protein [Ixodes scapularis] Length = 284 Score = 43.6 bits (101), Expect = 0.029, Method: Composition-based stats. Identities = 9/40 (22%), Positives = 20/40 (50%), Gaps = 5/40 (12%) Query: 4 VTVATWNVNSIR-----ARIHNLAAWIKENNPDIICLQET 38 + + +WN++ + AR ++ + PD++ LQE Sbjct: 34 LKLVSWNIDGLNDKEIQARTLSICNALNGLEPDVVFLQEV 73 >gi|330972149|gb|EGH72215.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. aceris str. M302273PT] Length = 291 Score = 43.6 bits (101), Expect = 0.030, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 14/61 (22%) Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 +F + +DHI+LSP T L ++ +P SDH PV V + +P+ Sbjct: 230 TFPSWRPQ-------RCLDHILLSPTLT--LERVQVLAQP-----ISDHLPVAVEIRLPD 275 Query: 266 P 266 Sbjct: 276 S 276 >gi|330952069|gb|EGH52329.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae Cit 7] Length = 291 Score = 43.6 bits (101), Expect = 0.030, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 14/61 (22%) Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 +F + +DHI+LSP T L ++ +P SDH PV V + +P+ Sbjct: 230 TFPSWRPQ-------RCLDHILLSPTLT--LERVQVLAQP-----ISDHLPVAVEIRLPD 275 Query: 266 P 266 Sbjct: 276 S 276 >gi|330938836|gb|EGH42355.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. pisi str. 1704B] Length = 265 Score = 43.6 bits (101), Expect = 0.030, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 14/61 (22%) Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 +F + +DHI+LSP T L ++ +P SDH PV V + +P+ Sbjct: 204 TFPSWRPQ-------RCLDHILLSPTLT--LERVQVLAQP-----ISDHLPVAVEIRLPD 249 Query: 266 P 266 Sbjct: 250 S 250 >gi|330901521|gb|EGH32940.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. japonica str. M301072PT] Length = 138 Score = 43.6 bits (101), Expect = 0.030, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 14/61 (22%) Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 +F + +DHI+LSP T L ++ +P SDH PV V + +P+ Sbjct: 77 TFPSWRPQ-------RCLDHILLSPTLT--LERVQVLAQP-----ISDHLPVAVEIRLPD 122 Query: 266 P 266 Sbjct: 123 S 123 >gi|302188968|ref|ZP_07265641.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. syringae 642] Length = 291 Score = 43.6 bits (101), Expect = 0.030, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 14/61 (22%) Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 +F + +DHI+LSP T L ++ +P SDH PV V + +P+ Sbjct: 230 TFPSWRPQ-------RCLDHILLSPTLT--LERVQVLAQP-----ISDHLPVAVEIRLPD 275 Query: 266 P 266 Sbjct: 276 S 276 >gi|294790312|ref|ZP_06755470.1| endonuclease/exonuclease/phosphatase family protein [Scardovia inopinata F0304] gi|294458209|gb|EFG26562.1| endonuclease/exonuclease/phosphatase family protein [Scardovia inopinata F0304] Length = 273 Score = 43.6 bits (101), Expect = 0.030, Method: Composition-based stats. Identities = 38/255 (14%), Positives = 69/255 (27%), Gaps = 23/255 (9%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80 L++ IK+ DII L E + N + +Y IE + Sbjct: 18 LSSVIKDQQIDIIVLAEYCADKDNLFTSIRANQDYFIEYMTLGCNRINIWGNYRNVEP-- 75 Query: 81 THLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQ 140 G + + I T+ + L + K + + Sbjct: 76 ---RGQNSYYSIQVINNTYVLCGLHLISDLHGDNSEERFAKIREIIKDVHDTEEEINSFK 132 Query: 141 RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHD 200 + + + ++ P + + +++ N + Sbjct: 133 SIIVGDFNDMPYSKGLLNADGFHGLPALKTTKKKTRMVSGTLYREYYN-PMWNFFGDFSA 191 Query: 201 THHLYSFWDYYADSWSKNKGIRI-DHIMLSPEATSLLH------------SARIDTKPRG 247 Y YY +S + I D +LS E L D R Sbjct: 192 PPGTY----YYNNSKLYSPMWYILDQFLLSRELAPNLVIDQLKIITECSHGTLYDKNDRP 247 Query: 248 WTKPSDHTPVIVSLD 262 TK SDH P++ +D Sbjct: 248 NTKISDHFPIMCEID 262 >gi|289674481|ref|ZP_06495371.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. syringae FF5] Length = 269 Score = 43.6 bits (101), Expect = 0.030, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 14/61 (22%) Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 +F + +DHI+LSP T L ++ +P SDH PV V + +P+ Sbjct: 208 TFPSWRPQ-------RCLDHILLSPTLT--LERVQVLAQP-----ISDHLPVAVEIRLPD 253 Query: 266 P 266 Sbjct: 254 S 254 >gi|71737405|ref|YP_272561.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|257481811|ref|ZP_05635852.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289627987|ref|ZP_06460941.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289646455|ref|ZP_06477798.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. aesculi str. 2250] gi|298485207|ref|ZP_07003300.1| Endonuclease/exonuclease/phosphatase family protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|71557958|gb|AAZ37169.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|298160195|gb|EFI01223.1| Endonuclease/exonuclease/phosphatase family protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320322199|gb|EFW78295.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. glycinea str. B076] gi|320331850|gb|EFW87788.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330866580|gb|EGH01289.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330872976|gb|EGH07125.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. glycinea str. race 4] gi|330986813|gb|EGH84916.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. lachrymans str. M301315] gi|331009446|gb|EGH89502.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 291 Score = 43.6 bits (101), Expect = 0.030, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 14/61 (22%) Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 +F + +DHI+LSP T L ++ +P SDH PV V + +P+ Sbjct: 230 TFPSWRPQ-------RCLDHILLSPTLT--LERVQVLAQP-----ISDHLPVAVEIRLPD 275 Query: 266 P 266 Sbjct: 276 S 276 >gi|66043537|ref|YP_233378.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. syringae B728a] gi|63254244|gb|AAY35340.1| Endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. syringae B728a] Length = 291 Score = 43.6 bits (101), Expect = 0.030, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 14/61 (22%) Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 +F + +DHI+LSP T L ++ +P SDH PV V + +P+ Sbjct: 230 TFPSWRPQ-------RCLDHILLSPTLT--LERVQVLAQP-----ISDHLPVAVEIRLPD 275 Query: 266 P 266 Sbjct: 276 S 276 >gi|328765816|gb|EGF75929.1| hypothetical protein BATDEDRAFT_28958 [Batrachochytrium dendrobatidis JAM81] Length = 579 Score = 43.6 bits (101), Expect = 0.030, Method: Composition-based stats. Identities = 15/81 (18%), Positives = 27/81 (33%), Gaps = 12/81 (14%) Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT--- 243 + + Y++ + N + +DHI++S I Sbjct: 45 HEGEHMTNMINKVEDGDRYTY------LFQGNSQV-LDHILVSNNLAE-ATEIDILHINA 96 Query: 244 KPRGWT-KPSDHTPVIVSLDI 263 + SDH PV+V LD+ Sbjct: 97 DFTDMAGRASDHDPVMVKLDL 117 >gi|167893940|ref|ZP_02481342.1| endonuclease/exonuclease/phosphatase family superfamily protein [Burkholderia pseudomallei 7894] Length = 139 Score = 43.6 bits (101), Expect = 0.030, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 4/38 (10%) Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 D ++ L ID G + SDH P+++ L Sbjct: 103 DFAFVTDTLVRRLSRCEID----GTVRASDHQPIVLEL 136 >gi|145546428|ref|XP_001458897.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124426719|emb|CAK91500.1| unnamed protein product [Paramecium tetraurelia] Length = 172 Score = 43.6 bits (101), Expect = 0.030, Method: Composition-based stats. Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 3/38 (7%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETK 39 + + + WN++SI+ N I++ P +ICLQE + Sbjct: 92 TKLKILCWNISSIK---KNTFQEIQQQKPHLICLQEVR 126 >gi|224113265|ref|XP_002332611.1| predicted protein [Populus trichocarpa] gi|222832812|gb|EEE71289.1| predicted protein [Populus trichocarpa] Length = 422 Score = 43.6 bits (101), Expect = 0.030, Method: Composition-based stats. Identities = 29/236 (12%), Positives = 66/236 (27%), Gaps = 33/236 (13%) Query: 5 TVATWNVNSIR------ARIHNLAAWIKENNPDIICLQETKTED--KNFPF-ETLQSLNY 55 + ++NV R R+ L I+ ++PD+ICLQE D F ++ Sbjct: 155 KILSYNVW-FREDLEMHRRMKALGELIQLHSPDVICLQEV-IPDIYDIFQRSSWWKAYQC 212 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + + S + P++ + P + + A + + + Sbjct: 213 SVSSEIASSRGYFCMQLSKLPVKSFSTKPFMNSIMGRELCIAELEVPGKKSLVVATSHLE 272 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 K+D S + + L + + C + + Sbjct: 273 SPCPAPPKWDQMFSKERVDQAKEAINLLKKNSNVIF-----------CGDMNWDDKLDGQ 321 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI--RIDHIMLS 229 + + +++ S N+ + R+D + S Sbjct: 322 FPFPDGWVDAWVELK---------PGDNGWTYDTKSNQMLSGNRALQKRLDRFICS 368 >gi|147787725|emb|CAN71912.1| hypothetical protein VITISV_018965 [Vitis vinifera] Length = 1856 Score = 43.6 bits (101), Expect = 0.030, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 22/60 (36%), Gaps = 7/60 (11%) Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 +++ + R+D ++SP S T+ R SDH P+I+ Sbjct: 299 QGGSFTW----SGGLHNQAWARLDRFLVSPSWLDQFSSV---TQKRLSRPISDHFPIIIE 351 >gi|4902834|emb|CAB43589.1| unnamed protein product [Homo sapiens] Length = 152 Score = 43.6 bits (101), Expect = 0.030, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 18/44 (40%), Gaps = 5/44 (11%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEP 266 IDHI+ S S I T SDH+ + + L I P Sbjct: 112 IDHILGSKALLSKCKRTEIITNYL-----SDHSAIKLELRIKNP 150 >gi|325189192|emb|CCA23715.1| conserved hypothetical protein [Albugo laibachii Nc14] Length = 283 Score = 43.6 bits (101), Expect = 0.031, Method: Composition-based stats. Identities = 39/270 (14%), Positives = 77/270 (28%), Gaps = 33/270 (12%) Query: 6 VATWNVNSIRA---------RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN-- 54 V ++NV + A R L +I+ NPD I QE + F F Q+L Sbjct: 22 VISYNVRTSNAPDVSYPWTDRKQQLQPFIEAENPDFIGTQE--ASPEQFEF-FQQALGDT 78 Query: 55 YHIETCGQKSYNGV---AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 Y I ++ K + D Q T+ + + Sbjct: 79 YGITGECAGECYENERPFLMYKKSEWNSLEFGSFALSDRQEIRGSNTWNLEYKRSVSWQR 138 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 + N I+ ++ K L + ++ + + D+ I+ + + Sbjct: 139 FQHKSNSISICLFNTHFDMTKGHLESSKLIVQERSKICKSFDFFILTGDLNANLQDDAIH 198 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 + Q G +++ + + D+I + P Sbjct: 199 YLKGIPLISTLQQCGYQGGTFIG-------PGVFTG-PLSSAVF--------DYIFIQPN 242 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + + I R +DH V + Sbjct: 243 ENIRIIGSSIIDSRRNGQAITDHAIVKTTF 272 >gi|229587662|ref|YP_002869781.1| putative endonuclease/exonuclease/phosphatase family protein [Pseudomonas fluorescens SBW25] gi|229359528|emb|CAY46369.1| putative endonuclease/exonuclease/phosphatase family protein [Pseudomonas fluorescens SBW25] Length = 292 Score = 43.6 bits (101), Expect = 0.031, Method: Composition-based stats. Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 14/59 (23%) Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 +F + +DHI+LSP T L S ++ +P SDH PV V + +P Sbjct: 228 TFPSWRPQ-------RCLDHILLSPTLT--LESVQVLAQP-----ISDHLPVAVEIRLP 272 >gi|167765272|ref|ZP_02437385.1| hypothetical protein BACSTE_03660 [Bacteroides stercoris ATCC 43183] gi|167696900|gb|EDS13479.1| hypothetical protein BACSTE_03660 [Bacteroides stercoris ATCC 43183] Length = 287 Score = 43.6 bits (101), Expect = 0.031, Method: Composition-based stats. Identities = 9/40 (22%), Positives = 20/40 (50%), Gaps = 2/40 (5%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 ID++ + + + + + G SDH PV+V+++ Sbjct: 250 IDYVFVRNDL--KVLRYGVLAETEGSEFLSDHAPVLVTVE 287 >gi|146284370|ref|YP_001174523.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas stutzeri A1501] gi|145572575|gb|ABP81681.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas stutzeri A1501] gi|327482753|gb|AEA86063.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas stutzeri DSM 4166] Length = 289 Score = 43.6 bits (101), Expect = 0.031, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 25/66 (37%), Gaps = 14/66 (21%) Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 +F + +DHI+LSP T L + SDH PV V + +P+ Sbjct: 229 TFPSWRPQ-------RCLDHILLSPSLT--LERVDVL-----ALPISDHLPVAVEIRLPD 274 Query: 266 PRKKQQ 271 + Sbjct: 275 SLRADS 280 >gi|108762628|ref|YP_630932.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus xanthus DK 1622] gi|108466508|gb|ABF91693.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus xanthus DK 1622] Length = 254 Score = 43.6 bits (101), Expect = 0.031, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 31/77 (40%), Gaps = 10/77 (12%) Query: 4 VTVATWNVN-SI----RARIHNLAAWIKENNPDIICLQET---KT--EDKNFPFETLQSL 53 + + ++N++ I R + + A ++E + DI+ LQE + ++ P L Sbjct: 3 LRLVSYNIHSGIGTDGRFDLGRVGAVLREVDADIVALQEVGDFRAVTPREDQPEHLADML 62 Query: 54 NYHIETCGQKSYNGVAI 70 H+ NG Sbjct: 63 GLHMAFGPNVVRNGRRY 79 >gi|168752009|ref|ZP_02777031.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC4113] gi|168756575|ref|ZP_02781582.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC4401] gi|168767291|ref|ZP_02792298.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC4486] gi|168777230|ref|ZP_02802237.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC4196] gi|168779334|ref|ZP_02804341.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC4076] gi|195936830|ref|ZP_03082212.1| DNase [Escherichia coli O157:H7 str. EC4024] gi|208815890|ref|ZP_03257069.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC4045] gi|208822066|ref|ZP_03262385.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC4042] gi|209396778|ref|YP_002269459.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC4115] gi|254791984|ref|YP_003076821.1| putative DNase [Escherichia coli O157:H7 str. TW14359] gi|187767486|gb|EDU31330.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC4196] gi|188014050|gb|EDU52172.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC4113] gi|189003112|gb|EDU72098.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC4076] gi|189356304|gb|EDU74723.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC4401] gi|189363397|gb|EDU81816.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC4486] gi|208732538|gb|EDZ81226.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC4045] gi|208737551|gb|EDZ85234.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC4042] gi|209158178|gb|ACI35611.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli O157:H7 str. EC4115] gi|209775986|gb|ACI86305.1| hypothetical protein ECs0868 [Escherichia coli] gi|254591384|gb|ACT70745.1| predicted DNase [Escherichia coli O157:H7 str. TW14359] Length = 253 Score = 43.6 bits (101), Expect = 0.031, Method: Composition-based stats. Identities = 34/267 (12%), Positives = 64/267 (23%), Gaps = 32/267 (11%) Query: 5 TVATWNVN-SI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN--YH 56 V T N++ R + L ++ + DI+CLQE +++ H Sbjct: 11 KVLTINIHKGFTAFNRRFILPELRDAVRTVSADIVCLQEV-MGAHEVHPLHVENWPDTSH 69 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 E ++ A E + +++ R Sbjct: 70 YEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVP 129 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + + R +Q L E + D + D + N Sbjct: 130 PMTGKAIHVMCVHLGLREAHRQAQLAMLAEWVNELPDGEPVLVAGDFNDWRQKANHPLKV 189 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 + +R+D I + + Sbjct: 190 QAGLDEIFTRAHGRPARTFPVQFPL-------------------LRLDRIYV----KNTS 226 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263 SA R W SDH P+ + + Sbjct: 227 ASAPTALPLRTWRHLSDHAPLSAEIHL 253 >gi|269796550|ref|YP_003316005.1| metal-dependent hydrolase [Sanguibacter keddieii DSM 10542] gi|269098735|gb|ACZ23171.1| metal-dependent hydrolase [Sanguibacter keddieii DSM 10542] Length = 251 Score = 43.6 bits (101), Expect = 0.032, Method: Composition-based stats. Identities = 10/35 (28%), Positives = 22/35 (62%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQE 37 + V ++NV S++ + I+E++PD++ +QE Sbjct: 18 TLRVLSYNVKSLQMDAAAVRDVIRESDPDVVAIQE 52 Score = 37.1 bits (84), Expect = 2.8, Method: Composition-based stats. Identities = 11/41 (26%), Positives = 20/41 (48%), Gaps = 3/41 (7%) Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 RID +++ + S+ + P + SDH P++V L Sbjct: 209 RRIDGVLVGDGFE--VLSSTVLRTP-AALRGSDHLPLLVEL 246 >gi|170747161|ref|YP_001753421.1| endonuclease/exonuclease/phosphatase [Methylobacterium radiotolerans JCM 2831] gi|170653683|gb|ACB22738.1| Endonuclease/exonuclease/phosphatase [Methylobacterium radiotolerans JCM 2831] Length = 261 Score = 43.6 bits (101), Expect = 0.032, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 35/77 (45%), Gaps = 10/77 (12%) Query: 5 TVATWNVNSIR---ARIHNLAAWIKENNPDIICLQE-TKTEDKNFPFETLQSLNYHIETC 60 + +WN+ +R A + ++AA + + PD++ +QE T+ F + + ++ Sbjct: 31 KIVSWNL--LRRTGAAVDDVAALVAQERPDLLLMQEATRAI--GFLLDRIG--GHYAWAP 84 Query: 61 GQKSYNGVAILSKYQPI 77 +G+A+ S Sbjct: 85 LPGRIHGLAMWSPKPWT 101 >gi|147811286|emb|CAN61231.1| hypothetical protein VITISV_041719 [Vitis vinifera] Length = 996 Score = 43.6 bits (101), Expect = 0.032, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 23/61 (37%), Gaps = 9/61 (14%) Query: 201 THHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 Y++ N+ R+D +++P S+ I R SDH PV++ Sbjct: 69 QGGDYTW-----SGGPNNRYWARLDRFLVTPSWMDQF-SSVIQK--RLPRPASDHFPVVL 120 Query: 260 S 260 Sbjct: 121 E 121 >gi|261856746|ref|YP_003264029.1| endonuclease/exonuclease/phosphatase [Halothiobacillus neapolitanus c2] gi|261837215|gb|ACX96982.1| Endonuclease/exonuclease/phosphatase [Halothiobacillus neapolitanus c2] Length = 286 Score = 43.6 bits (101), Expect = 0.032, Method: Composition-based stats. Identities = 23/292 (7%), Positives = 64/292 (21%), Gaps = 64/292 (21%) Query: 1 MSVVTVATWNV--------------NSIR---------ARIHNLAAWIKENNPDIICLQE 37 + + + ++N+ N + + ++A + + D+I LQE Sbjct: 29 LRPLRLLSYNIQAGIGTRNFRDYVLNGWKHVLPFPKRMQNLDHIAQLL--SQFDLIGLQE 86 Query: 38 TKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA 97 + + L + Y + + + Sbjct: 87 --ADGGSLRSHFLNQIEYLAMRSNMPFWATRINRDLGHWGQHALGMLSRVEPYHIERYAL 144 Query: 98 TFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII 157 I + + + + + + L + Sbjct: 145 PARIPGRGVVLADFDW-----------------------YGQRVRVQVSHLSLSDRARRA 181 Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK 217 ++ + + ++ + Sbjct: 182 QLDRLIARCREFDGVNIVMADFNCTPNNRDLQRLCLEAGLKLPFAPPLTYPSWEPK---- 237 Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKK 269 IDHI++S I++ SDH P+ + + +P Sbjct: 238 ---RAIDHILVSENI-------EIESVDALTYGVSDHAPLSMQIKLPPVSNH 279 >gi|149199714|ref|ZP_01876746.1| endonuclease/exonuclease/phosphatase family protein [Lentisphaera araneosa HTCC2155] gi|149137231|gb|EDM25652.1| endonuclease/exonuclease/phosphatase family protein [Lentisphaera araneosa HTCC2155] Length = 319 Score = 43.6 bits (101), Expect = 0.032, Method: Composition-based stats. Identities = 35/294 (11%), Positives = 83/294 (28%), Gaps = 27/294 (9%) Query: 2 SVVTVATWNVNSIRA------RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55 + + V ++N+ R + A I+E DI+ +QE ++ + + L++ Sbjct: 27 AKLRVMSYNI--YRGGEMFGRELSQTAKVIQEAEADIVGIQEPRSPKGFTTQKLAKLLDW 84 Query: 56 HIETCGQKSYNGVAI--LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 + + +K + + G ++ + + + Q L I + Sbjct: 85 NHSSNIRKGIILTPYEIIENLDGGVKIKLPTGQEVYAFSLHLPSHPYQPYQLLGIRPKWH 144 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELE----------EPLIFAGDYNIIPQPHDC 163 + N I K + + + R A + L+ + Sbjct: 145 KNTNNIEFIKTEAEAIEWAKKARGAEIKKLLKVISSLPDKEAPVFVVGDFNEPSHLDWTE 204 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223 + + K I + ++ Y RI Sbjct: 205 AAAKAGRHPIKVAYPNSVAMVKAGFSDSYRVIYPDEMKNPGLTWSPKYKADDPTTHLDRI 264 Query: 224 DHIMLSPEATSLLHSARI------DTKPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271 D + + A+I + PSDH V+ + + + ++ Sbjct: 265 DFVYF-KGKGLKVTDAKIIGENSENADIVVTPYPSDHRAVVATFTLDKASALKE 317 >gi|146310939|ref|YP_001176013.1| endonuclease/exonuclease/phosphatase [Enterobacter sp. 638] gi|145317815|gb|ABP59962.1| Endonuclease/exonuclease/phosphatase [Enterobacter sp. 638] Length = 253 Score = 43.6 bits (101), Expect = 0.032, Method: Composition-based stats. Identities = 29/268 (10%), Positives = 63/268 (23%), Gaps = 32/268 (11%) Query: 4 VTVATWNVN-SI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN--Y 55 + + T N + R + L ++ DI+CLQE +++ Sbjct: 10 LKILTINTHKGFTAFNRRFILPELRDAVRTVGADIVCLQEV-MGAHEIHPMHVENWPDTT 68 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 H E ++ A E + ++ R Sbjct: 69 HYEFLADTMWSDYAYGRNAVYPEGHHGNAVLSRFPIEHYENRDVSVGESEKRGLLYCRIT 128 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + + + R +Q + + + + + D + N Sbjct: 129 PPELAFPIHVGCVHLGLREAHRQAQLNMMAKWVNALPEGEPVVVAGDFNDWRQRANHPLK 188 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 + + +R+D I + S Sbjct: 189 AQAGLDEIFTRAHGRPARTFPVSFPV-------------------LRLDRIYVKNAHASS 229 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + R W SDH P+ + + Sbjct: 230 PTA----LALRTWRHLSDHAPLSAEIHL 253 >gi|298245685|ref|ZP_06969491.1| Endonuclease/exonuclease/phosphatase [Ktedonobacter racemifer DSM 44963] gi|297553166|gb|EFH87031.1| Endonuclease/exonuclease/phosphatase [Ktedonobacter racemifer DSM 44963] Length = 340 Score = 43.6 bits (101), Expect = 0.032, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 24/59 (40%), Gaps = 5/59 (8%) Query: 222 RIDHIMLSPEATSLLHSAR-ID--TKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQN 277 RID+I +PE L + I G SDH + S I +P K T++ Sbjct: 280 RIDYIFATPELAQRLEQCQPILMGNGVLGSA-ASDHLAMTASF-ISQPSKTTTQPTTEE 336 >gi|302897971|ref|XP_003047751.1| hypothetical protein NECHADRAFT_72444 [Nectria haematococca mpVI 77-13-4] gi|256728682|gb|EEU42038.1| hypothetical protein NECHADRAFT_72444 [Nectria haematococca mpVI 77-13-4] Length = 305 Score = 43.6 bits (101), Expect = 0.032, Method: Composition-based stats. Identities = 39/288 (13%), Positives = 72/288 (25%), Gaps = 38/288 (13%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNP-DI--------------------ICLQETKTED 42 + + T+NV R N P D+ ICLQE Sbjct: 26 LRIVTFNV---RYATTNFEP---HEKPWDVRCPKLVNQLSFITAGHESPFICLQEC-LYP 78 Query: 43 KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQP---IEIVTHLPGDDLDVQARFIEATF 99 + ++ + G+ S S L + Sbjct: 79 QVKDIQSRLGDGWSHIGRGRGSGEHDGEFSPIFYRSDNWSCERSEVRWLSKTPFEPSRGW 138 Query: 100 TINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159 + +L G I R S +L ++ + P Sbjct: 139 DAVLNRIVTMGEFLHRGTGTRVIVMSTHFDHIGVKARENSAKLLIKFAREWGSGGVGSPS 198 Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK 219 + + + ++ A + Y+ + S + Sbjct: 199 AVLVGGDFNSSPNDGGYKIMTAPDSGMSDISHLLPKSAHYGNQITYTSF---GKYDSSGE 255 Query: 220 GI---RIDHIMLSPEATSLLHSARIDTKPRGWT-KPSDHTPVIVSLDI 263 G RID + + T+ + + + + SDH PV+ LDI Sbjct: 256 GWEEARIDFLFIQEPRTAHVKTFGVLANFFDDDVRVSDHRPVVSDLDI 303 >gi|170690563|ref|ZP_02881730.1| Endonuclease/exonuclease/phosphatase [Burkholderia graminis C4D1M] gi|170144998|gb|EDT13159.1| Endonuclease/exonuclease/phosphatase [Burkholderia graminis C4D1M] Length = 258 Score = 43.6 bits (101), Expect = 0.033, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 19/41 (46%), Gaps = 7/41 (17%) Query: 4 VTVATWNVNSI------RARIHNLAAWIKENNPDIICLQET 38 + + T+N++ R+ +A I N D++ LQE Sbjct: 34 LRIVTYNIHGAVGTDGKRSAA-RIAEVIAALNADVVALQEV 73 Score = 36.3 bits (82), Expect = 5.4, Method: Composition-based stats. Identities = 10/76 (13%), Positives = 23/76 (30%), Gaps = 10/76 (13%) Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + + +F +++ +D + + P + L +D Sbjct: 189 WFVWGWPLRALLTRFGRVAAPRTFPS-RFPAFA------LDRVWVHP--AARLVDIEVDR 239 Query: 244 KPRGWTKPSDHTPVIV 259 R SDH P++ Sbjct: 240 S-RPARIASDHLPLVA 254 >gi|114624073|ref|XP_001149897.1| PREDICTED: hypothetical protein [Pan troglodytes] Length = 373 Score = 43.6 bits (101), Expect = 0.033, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 26/77 (33%), Gaps = 10/77 (12%) Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR 246 D R H Y+F ++SK IDHI+ S S I Sbjct: 6 HQADLIDIYRTLHPESTEYTFLSEPHCTYSK-----IDHIVGSKSLLSKCKRTEIIINCL 60 Query: 247 GWTKPSDHTPVIVSLDI 263 SDH+ + + L I Sbjct: 61 -----SDHSAIKLELRI 72 >gi|254382637|ref|ZP_04997995.1| endonuclease/exonuclease/phosphatase [Streptomyces sp. Mg1] gi|194341540|gb|EDX22506.1| endonuclease/exonuclease/phosphatase [Streptomyces sp. Mg1] Length = 253 Score = 43.6 bits (101), Expect = 0.033, Method: Composition-based stats. Identities = 34/270 (12%), Positives = 68/270 (25%), Gaps = 41/270 (15%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 +V+ V ++N+ S+R LA I+ PD++ +QE Sbjct: 20 AVIRVLSYNIRSLRDDEDALARVIRACAPDLVFVQE-------------------APRFF 60 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 + + + SK + + + + L + G Sbjct: 61 RWRKHAARLASKSELVVLSGGATAAGPLLLCSLRAFVERTEDVLLPMTPGLHRRGFATAV 120 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 ++ + L + + N+ + Sbjct: 121 VRFGAVRVGVLSAHLSLDPGERLAQAGLLLERTEA--MDTPYKIAAGDFNEPPEGPAFAR 178 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 +LQ+ H S RID + S + + Sbjct: 179 VAARLQDCRTVAPWGGEHTFTGGPS-------------ARRIDAVFASRGVE--VLGCGV 223 Query: 242 DTKPRG-----WTKPSDHTPVIVSLDIPEP 266 G +DH PV+ +L +P P Sbjct: 224 PEGLPGVTPADLRAATDHLPVLAALRLPAP 253 >gi|170782595|ref|YP_001710928.1| hypothetical protein CMS_2252 [Clavibacter michiganensis subsp. sepedonicus] gi|169157164|emb|CAQ02344.1| conserved hypothetical protein [Clavibacter michiganensis subsp. sepedonicus] Length = 264 Score = 43.6 bits (101), Expect = 0.033, Method: Composition-based stats. Identities = 34/249 (13%), Positives = 64/249 (25%), Gaps = 28/249 (11%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQP 76 R LA +++ P ++ +QE P ++ + + Sbjct: 26 REPVLARFLQLEQPTVLGVQE--ALSAQLP-----------AIARALPHHRMLGYGRDGG 72 Query: 77 IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 D F ++ IG+ +T + Sbjct: 73 SGGEYSAIFYDERRLDVVAWDQFWLSDLPELIGSRSWGCSTTRIATWARFRDRRSGAEFV 132 Query: 137 FASQRLELEE---PLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQ-----N 188 + L+ E + A Q P++ D E ++ L Sbjct: 133 HLNTHLDHESELARVKSADLITERLQEVASGAPVVVTGDFNAPAEESAAYDILTRDAGLA 192 Query: 189 MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGW 248 +T A ++ A +G RID I+ + + I+ Sbjct: 193 DTWTTAAHHATPGIGTFT-----AYGDPVPEGERIDWILAGDGVE--VVDSAINPYTYEG 245 Query: 249 TKPSDHTPV 257 PSDH V Sbjct: 246 RSPSDHAAV 254 >gi|167815447|ref|ZP_02447127.1| endonuclease/exonuclease/phosphatase family superfamily protein [Burkholderia pseudomallei 91] Length = 118 Score = 43.6 bits (101), Expect = 0.033, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 4/38 (10%) Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 D ++ L ID G + SDH P+++ L Sbjct: 82 DFAFVTDTLVRRLSRCEID----GTVRASDHQPIVLEL 115 >gi|289641584|ref|ZP_06473745.1| endonuclease/exonuclease/phosphatase [Frankia symbiont of Datisca glomerata] gi|289508565|gb|EFD29503.1| endonuclease/exonuclease/phosphatase [Frankia symbiont of Datisca glomerata] Length = 85 Score = 43.6 bits (101), Expect = 0.033, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 7/43 (16%) Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +RIDH++ SP+ + ++ G SDH P++V L + Sbjct: 49 LRIDHVLASPQFA--VTGYQV-----GNKIGSDHKPLVVDLAL 84 >gi|166710588|ref|ZP_02241795.1| hypothetical protein Xoryp_03765 [Xanthomonas oryzae pv. oryzicola BLS256] Length = 245 Score = 43.6 bits (101), Expect = 0.033, Method: Composition-based stats. Identities = 15/95 (15%), Positives = 30/95 (31%), Gaps = 14/95 (14%) Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 +A + + + R + +++F + D IDHI++S Sbjct: 160 HPNAMLMGDFNCMADRPEMQSLYRHTRLQPPSCEVHTFPSWRPD-------RAIDHILVS 212 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 I+ SDH V + + +P Sbjct: 213 DRLV-------IEHTEATPAAFSDHLAVGMDIRVP 240 >gi|68065240|ref|XP_674604.1| hypothetical protein [Plasmodium berghei strain ANKA] gi|56493285|emb|CAI01530.1| hypothetical protein PB401683.00.0 [Plasmodium berghei] Length = 108 Score = 43.6 bits (101), Expect = 0.033, Method: Composition-based stats. Identities = 11/41 (26%), Positives = 21/41 (51%), Gaps = 2/41 (4%) Query: 6 VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKN 44 + + +N + + I L W+ + +P CLQET +K+ Sbjct: 17 LISLTINGLHSPIKRHRLTDWLHKQDPTFCCLQETHLREKD 57 >gi|50289263|ref|XP_447062.1| hypothetical protein [Candida glabrata CBS 138] gi|74609806|sp|Q6FRT2|CCR4_CANGA RecName: Full=Glucose-repressible alcohol dehydrogenase transcriptional effector; AltName: Full=Carbon catabolite repressor protein 4; AltName: Full=Cytoplasmic deadenylase gi|49526371|emb|CAG59995.1| unnamed protein product [Candida glabrata] Length = 873 Score = 43.6 bits (101), Expect = 0.033, Method: Composition-based stats. Identities = 36/286 (12%), Positives = 71/286 (24%), Gaps = 46/286 (16%) Query: 17 RIHNLAAWIKENNPDIICLQETKTED-KNFPFETLQSLNY----HIETCGQKSYNGVAIL 71 R L I N DIICLQE + + ++F L+ Y H +T + + + Sbjct: 569 RREKLKEQILNFNTDIICLQEVEAKTFEDFWQPLLEKHGYTGLFHAKTRAKTMQSKDSKK 628 Query: 72 SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWI 131 T F L + + Sbjct: 629 VDGCCAFYKTSKFKMLFKECVDFSGLWMKHKKFQRTEDYLNRAMNKDNVAIVMKLQHIQS 688 Query: 132 KRFLRFASQRLELEEPLI---------FAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + L + + + + + Sbjct: 689 GEIMWLVTTHLHWDPKFNDVKTFQVGVLLDHMETLLKEQNPKQDVKKYPLVICGDLNSYL 748 Query: 183 FQKLQNMGFTDAIRATHDTHHL-YSFWDYYADSWSKNKGIR------------------- 222 + + T ++ HD + ++ D++S N ++ Sbjct: 749 SSSVYELFSTGRVQHHHDGKDRDFGYFS--EDNFSHNLALKSSYNCIGELAFTNFTPSFT 806 Query: 223 --IDHIM-LSPEATSLLHSARIDTKPRGW-------TKPSDHTPVI 258 ID+I S +D++ PSDH P++ Sbjct: 807 DVIDYIWFSSQALRVRGLLGEVDSEYVSNFIGFPNDKFPSDHIPLL 852 >gi|305667408|ref|YP_003863695.1| hypothetical protein FB2170_14213 [Maribacter sp. HTCC2170] gi|88709456|gb|EAR01689.1| hypothetical protein FB2170_14213 [Maribacter sp. HTCC2170] Length = 252 Score = 43.6 bits (101), Expect = 0.033, Method: Composition-based stats. Identities = 43/283 (15%), Positives = 75/283 (26%), Gaps = 59/283 (20%) Query: 7 ATWN---------VNSIRARIHNLAAWIKENNPDIICLQE-----TKTEDKNFPFETLQS 52 T+N VN+ R +L I+ P I QE K D+ P + Sbjct: 1 MTYNIKYDNKKDTVNNWNDRKASLVRLIRHYEPSIFGTQEALHHQVKYIDEELPDFSFIG 60 Query: 53 LN---------Y---HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT 100 + Y H K + P +I + + Sbjct: 61 VGRDDGKQKGEYSSIHYNHTKYKVLSSNTFWLSKTPNKISVGWDASMERICTYGLFEELE 120 Query: 101 INTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP 160 + + G + K L+ + P+I GD+N+ P Sbjct: 121 TSNTFYVFNTHFDHRGKKA-------REKSAKLILKKIKKINSSNLPVILMGDFNLNPVE 173 Query: 161 HDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG 220 + D + GF ++ + Sbjct: 174 KPIKSIKKVMVDGLDATQKPFYGPSGTFNGFNPTMKLDN--------------------- 212 Query: 221 IRIDHIMLSPEATSLLHS-ARIDTKPRGWTKPSDHTPVIVSLD 262 RID+I + + S ID + SDH PV++ ++ Sbjct: 213 -RIDYIFV-KNI--KVKSYTHIDDRMENNKHISDHLPVLIHIE 251 >gi|94311051|ref|YP_584261.1| endonuclease/exonuclease/phosphatase [Cupriavidus metallidurans CH34] gi|93354903|gb|ABF08992.1| Metal-dependent hydrolase [Cupriavidus metallidurans CH34] Length = 284 Score = 43.6 bits (101), Expect = 0.033, Method: Composition-based stats. Identities = 32/305 (10%), Positives = 79/305 (25%), Gaps = 66/305 (21%) Query: 4 VTVATWNV------NSIRARIHNLAAWIKE-NNPDIICLQET---------KTEDKNFPF 47 + + +WN+ + + + + ++ + D++CLQE Sbjct: 1 MELISWNIQWGRGADG-KVDLARIVDTLRGMADADVLCLQEITRGFSDLAGHPGPDQVAE 59 Query: 48 ETLQSLNYHIETCG---------QKSYNGVAILSKYQPIEIVTHLPGDDLD-----VQAR 93 + +Y + G I ++ EI H D + Sbjct: 60 LSALLPDYQVIFAPGVDRTHRDGSPRQFGNVIATRLPVREIFRHALPWPADPDVASMPRV 119 Query: 94 FIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLI---- 149 +E T ++ LRI +L + + + + ++ E Sbjct: 120 ALEVTVQAGSRLLRIICTHLEYYSTSQRAAQTEALRDWHVQACDHARHPGRSENRPGPFT 179 Query: 150 ---------FAGDYNIIPQPHDCYNPIIWENDA--CFTLEVRQSFQKLQNMGFTDAIRAT 198 GD+N P+ + + + Sbjct: 180 PEPRPSEAILCGDFNSRPEDGAYLRMVETFGGVTPDWHDAWIHMHPGQPHAPTCALFDKE 239 Query: 199 HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVI 258 ++ D + ++ + + ++ T SDH P+ Sbjct: 240 QWPEPPFAC----------------DFVFVTDDLLGNVRRCEVND----RTDASDHQPIH 279 Query: 259 VSLDI 263 ++ D+ Sbjct: 280 LTTDL 284 >gi|328541790|ref|YP_004301899.1| Endonuclease/exonuclease/phosphatase family [Polymorphum gilvum SL003B-26A1] gi|326411542|gb|ADZ68605.1| Endonuclease/exonuclease/phosphatase family [Polymorphum gilvum SL003B-26A1] Length = 323 Score = 43.6 bits (101), Expect = 0.034, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 24/56 (42%), Gaps = 9/56 (16%) Query: 217 KNKGIRIDHIMLSPEATSLLHSARID-----TKPRGWTKP----SDHTPVIVSLDI 263 + +G +DHI++S E R+ + R P S H PV+ + ++ Sbjct: 268 RGRGHALDHILVSRELLFRARDIRVLNEGLADEVRDAGTPAEAGSFHAPVVATFEL 323 Score = 40.9 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 11/48 (22%), Positives = 22/48 (45%), Gaps = 10/48 (20%) Query: 4 VTVATWNVNS----------IRARIHNLAAWIKENNPDIICLQETKTE 41 + +AT+N+ S ++ R+ L + D++CLQE + Sbjct: 1 MRLATFNLESFGEDDFDAEALQPRLDALRPTLLALKADVLCLQEVNAQ 48 >gi|307316912|ref|ZP_07596354.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium meliloti AK83] gi|306897534|gb|EFN28278.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium meliloti AK83] Length = 261 Score = 43.6 bits (101), Expect = 0.034, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 21/43 (48%), Gaps = 3/43 (6%) Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +RIDH+++ + S R+ SDH P++ LD+ Sbjct: 217 LRIDHVLVGKGVE--VASCRVHGSTLAR-SASDHLPLLAELDV 256 Score = 40.5 bits (93), Expect = 0.26, Method: Composition-based stats. Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 5/40 (12%) Query: 4 VTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQET 38 + T+NV+S R +AA I E PD+I LQE Sbjct: 21 IRFLTYNVHSCFGTDRRLDPARIAAVIAECQPDVIALQEV 60 >gi|148271905|ref|YP_001221466.1| hypothetical protein CMM_0726 [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147829835|emb|CAN00758.1| conserved hypothetical protein [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 349 Score = 43.6 bits (101), Expect = 0.034, Method: Composition-based stats. Identities = 34/249 (13%), Positives = 64/249 (25%), Gaps = 28/249 (11%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQP 76 R LA +++ P ++ +QE P ++ + + Sbjct: 111 REPVLARFLQLEQPTVLGVQE--ALSAQLP-----------AIARALPHHRMLGYGRDGG 157 Query: 77 IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 D F ++ IG+ +T + Sbjct: 158 SGGEYSAIFYDERRLDVVAWDQFWLSDLPELIGSRSWGCSTTRIATWARFRDRRSGAEFV 217 Query: 137 FASQRLELEE---PLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQ-----N 188 + L+ E + A Q P++ D E ++ L Sbjct: 218 HLNTHLDHESELARVKSADLITERLQEVASGAPVVVTGDFNAPAEESAAYDILTRDAGLA 277 Query: 189 MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGW 248 +T A ++ A +G RID I+ + + I+ Sbjct: 278 DTWTTAAHHATPGIGTFT-----AYGDPVPEGERIDWILAGSGVE--VVDSAINPYTFEG 330 Query: 249 TKPSDHTPV 257 PSDH V Sbjct: 331 RSPSDHAAV 339 >gi|77456279|ref|YP_345784.1| endonuclease/exonuclease/phosphatase [Pseudomonas fluorescens Pf0-1] gi|77380282|gb|ABA71795.1| putative endonuclease/exonuclease/phosphatase family protein [Pseudomonas fluorescens Pf0-1] Length = 292 Score = 43.6 bits (101), Expect = 0.034, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 14/59 (23%) Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 +F + +DHI+LSP T L + +P SDH PV V + +P Sbjct: 228 TFPSWRPQ-------RCLDHILLSPTLT--LEKVEVLAQP-----ISDHLPVAVEIRLP 272 >gi|218190510|gb|EEC72937.1| hypothetical protein OsI_06799 [Oryza sativa Indica Group] Length = 1035 Score = 43.6 bits (101), Expect = 0.034, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 9/60 (15%) Query: 204 LYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI--DTKPRGWTKPSDHTPVIVSL 261 Y++ D + S N +R+D+ + L +A++ + PR SDH P++V Sbjct: 735 PYTY-DNRREGRS-NVKVRLDYALADDGWRGLFSTAQVFHLSSPR-----SDHCPILVKF 787 >gi|147770408|emb|CAN62682.1| hypothetical protein VITISV_026756 [Vitis vinifera] Length = 757 Score = 43.6 bits (101), Expect = 0.034, Method: Composition-based stats. Identities = 19/127 (14%), Positives = 42/127 (33%), Gaps = 7/127 (5%) Query: 134 FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTD 193 F L E G ++ +N I + N++ + S ++ + Sbjct: 186 FWDNRVLELVGMELEAICGLWSDPWCIGGDFNMIRFPNESRRAGRLSSSMRRFSKVIDDL 245 Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253 +R +++ + + R+D ++S + T PR SD Sbjct: 246 DLRDLPLQGGPFTW----SGGLNNQAMSRLDRFLVSEDWEGHFKGVVQCTLPRSV---SD 298 Query: 254 HTPVIVS 260 H P+++ Sbjct: 299 HFPILLD 305 >gi|298504828|gb|ADI83551.1| endonuclease/exonuclease/phosphatase family protein [Geobacter sulfurreducens KN400] Length = 335 Score = 43.6 bits (101), Expect = 0.034, Method: Composition-based stats. Identities = 44/332 (13%), Positives = 78/332 (23%), Gaps = 78/332 (23%) Query: 1 MSVVTVATWNVNSI------------RARIHNLAAWIKENNPDIICLQE----------- 37 M V + +WNV + R R + I+E PDI+CL E Sbjct: 1 MGTVKITSWNVAHLERLTRAHPTAKERRRRDAVVREIRELAPDILCLLEGPAGEAGIDLV 60 Query: 38 -----------TKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGD 86 K D N+ + I ++ A L + + Sbjct: 61 ANDLLDGEWVAVKAADGNYATRG----DQWIWFLVRQDLADRASLLPVGTWDTFAGVSWT 116 Query: 87 DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELE- 145 + I + I I+ +R R +R E Sbjct: 117 CHLWGEFTEGTHRHYRHPQVLILDWNGLRVEFIGLHLKSKFINQGERLWRDERERFIREA 176 Query: 146 -------------EPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192 + + P + E + F L Sbjct: 177 LTARIKMATEAVNVRAYIDAKFRQVGNPALFVLGDFNDGPGKEYFEEQYLFFDLIANIQG 236 Query: 193 DAI-------RATHDTHHLYSFWDYYADSW---SKNKGIRIDHIMLSPEATS-------L 235 + D W + + I +DHI+ + + Sbjct: 237 NVFATSRFLNHGLFDIPDEL-CWTVRFRDFVQPDRRPEILLDHILFTQGLVNGSLPWQVK 295 Query: 236 LHSARIDTKPRGWTKP--------SDHTPVIV 259 H+ +++ + SDH PV + Sbjct: 296 PHAGKVEHEVHELVNAGLPKDSQTSDHRPVSL 327 >gi|256419905|ref|YP_003120558.1| endonuclease/exonuclease/phosphatase [Chitinophaga pinensis DSM 2588] gi|256034813|gb|ACU58357.1| Endonuclease/exonuclease/phosphatase [Chitinophaga pinensis DSM 2588] Length = 367 Score = 43.6 bits (101), Expect = 0.034, Method: Composition-based stats. Identities = 31/282 (10%), Positives = 75/282 (26%), Gaps = 43/282 (15%) Query: 5 TVATWNV-N-SIR-----ARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56 T+ T+N N + + + + ++E +PDI+C+QE T + Sbjct: 106 TIMTFNTSNMGLNDYREDSVLQGSIYDMLREASPDILCMQEFYTNEG------------- 152 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 + Y F +++ + Sbjct: 153 PNFTNHIDSISRTLGYPYHFFTCDMSHWDYWHYGIVLFSRFPIVRSSKIPCGYSSAGSGS 212 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + + S + + S + + + + + Sbjct: 213 SFLQSDILVQGDTIRVLTAQLQSYMFRGNDYDLLEKGKGTFSGIRNLASKMKHTIHKRAA 272 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWD---YYADSWSKN---KG---------I 221 + + + +D Y++ D++ K+ G + Sbjct: 273 QSRKMAELIAASPYKVVVCGDFNDPPVSYTYNTISANMQDAFLKDGFGVGRTLSFLAPTL 332 Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 RID+I+ + S + T R + H P++ L + Sbjct: 333 RIDYILAQKPI--RVKSYK--TFHRKGFQ---HFPIMAGLSL 367 >gi|28269466|gb|AAO38009.1| putative reverse transcriptase [Oryza sativa Japonica Group] gi|28875978|gb|AAO59987.1| putative reverse transcriptase [Oryza sativa Japonica Group] gi|108709646|gb|ABF97441.1| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 1349 Score = 43.6 bits (101), Expect = 0.034, Method: Composition-based stats. Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 2/38 (5%) Query: 6 VATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTE 41 + WNV + A+ N+ + + ++CLQETK E Sbjct: 331 ILNWNVRGLNSQAKQDNVKLLVDQMKATVVCLQETKME 368 >gi|189464427|ref|ZP_03013212.1| hypothetical protein BACINT_00769 [Bacteroides intestinalis DSM 17393] gi|189438217|gb|EDV07202.1| hypothetical protein BACINT_00769 [Bacteroides intestinalis DSM 17393] Length = 277 Score = 43.6 bits (101), Expect = 0.034, Method: Composition-based stats. Identities = 36/272 (13%), Positives = 79/272 (29%), Gaps = 32/272 (11%) Query: 6 VATWNV---------NSIRARIHNLAAWIKENNPDIICLQET---KTEDKNFPFETLQSL 53 V T+N+ N+ + R N+ I PD++ +QE + ED +L Sbjct: 23 VMTFNIRLDAPSDSANNWKYRKDNVCKMIAYYQPDLLGMQEVCHNQMEDLKLGLPQYTAL 82 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 + + + + + + + + + Sbjct: 83 GVGRDDGKEAGEYCPVFFKTDRFTLVEHGNFS-LSEQPETIGVRGWDASYNRITTWAILQ 141 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + ++ + + R +L L + + + P I D Sbjct: 142 KKSDGKKLVFFNTHLDNDGKTARKEGVQLILNKI-----------KETAPHMPAIITGDF 190 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR--IDHIMLSPE 231 T + + AT +SF D+ K R +D++ ++ Sbjct: 191 NCTPGEAPLQTLEKGGMKNTSKVATVMYGPSWSFHDFGRLPMEK----RVLLDYVFVTNG 246 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + R+ SDH PV+V++ + Sbjct: 247 --TKTDRYRVIQDTPENGFLSDHNPVLVNITL 276 >gi|320175211|gb|EFW50320.1| Endonuclease/Exonuclease/phosphatase family protein [Shigella dysenteriae CDC 74-1112] Length = 253 Score = 43.6 bits (101), Expect = 0.035, Method: Composition-based stats. Identities = 35/268 (13%), Positives = 64/268 (23%), Gaps = 34/268 (12%) Query: 5 TVATWNV-------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN--Y 55 V T N+ N R + L ++ + DI+CLQE +++ Sbjct: 11 KVLTINIQKGFTAFN-RRFILPELRDAVRTVSADIVCLQEV-MGAHEVHPLHVENWPDTS 68 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 H E ++ A E + +++ R Sbjct: 69 HYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIV 128 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + + R +Q L E + D + D + N Sbjct: 129 PPMTGKAIHVMCVHLGLREAHRQAQLAMLAEWVNELPDGEPVLVAGDFNDWRQKANHPLK 188 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 + +R+D I + + Sbjct: 189 VQAGLDEIFTRAHGRPARTFPVQFPL-------------------LRLDRIYV----KNA 225 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 SA R W SDH P+ + + Sbjct: 226 SASAPTALPLRTWRHLSDHAPLSAEIHL 253 >gi|323359561|ref|YP_004225957.1| hypothetical protein MTES_3113 [Microbacterium testaceum StLB037] gi|323275932|dbj|BAJ76077.1| hypothetical protein MTES_3113 [Microbacterium testaceum StLB037] Length = 340 Score = 43.2 bits (100), Expect = 0.035, Method: Composition-based stats. Identities = 37/259 (14%), Positives = 74/259 (28%), Gaps = 26/259 (10%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V TWN ++A + + D++ L ET + E ++ + Sbjct: 104 LRVMTWNTAGAATSAESIAQFAVDMQADVVTLPETTIDTGTRVAELMRDMG-----RPMW 158 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +++ ++ + + + D + NT T+ G+ Sbjct: 159 AHHAEYGVTGWGATSTTVLIRPELGDYSVIDSSLDGSSNTSTVPSAVAMPVSGDGPIIVA 218 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + R R +L+ N+I + + Sbjct: 219 ---AHAVAPREDYMTQWRSDLKWLADQCASDNVILAGDFNATIDHMTGLGVDGGTLGRCR 275 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 G D + G IDH+M +P+ T + + + Sbjct: 276 DTTSASGNGGVGTWPTDIPAI--------------LGAPIDHVMATPDWT--VSGSIVMR 319 Query: 244 KPRGWTKPSDHTPVIVSLD 262 G SDH PV+V L+ Sbjct: 320 TLDGS--GSDHRPVVVQLE 336 >gi|196005147|ref|XP_002112440.1| hypothetical protein TRIADDRAFT_25141 [Trichoplax adhaerens] gi|190584481|gb|EDV24550.1| hypothetical protein TRIADDRAFT_25141 [Trichoplax adhaerens] Length = 267 Score = 43.2 bits (100), Expect = 0.035, Method: Composition-based stats. Identities = 28/265 (10%), Positives = 56/265 (21%), Gaps = 33/265 (12%) Query: 16 ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75 +R H+L I + DIICL E + + + + K Sbjct: 16 SRKHSLMQEILRSKADIICL------------EEVDHYSDFFQPILTSLDYIGFFVPKPD 63 Query: 76 PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135 ++ F F++ I N + + + Sbjct: 64 SPCLLYDENNGPDGCALFFSAKKFSLILHDQFILRKNDGDTNQVAIVILLETTFLPESKK 123 Query: 136 RFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAI 195 + + N + + F N Sbjct: 124 ICIVCTHLKSHSSEWCENIRKEQSAFLLNKVGQLINFEYIPIIICGDFNTDPNTPTYTNF 183 Query: 196 RATHDT-----------HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH------S 238 ++ W + + ID+I S + + Sbjct: 184 ANFQPCHLKSAYALNGEEPKFTTWKFRPKCQVCHT---IDYIWFSDKFLKRVQFLAIPTM 240 Query: 239 ARIDTKPRGWT-KPSDHTPVIVSLD 262 + I PSDH ++ Sbjct: 241 SEIGPNALPAEHYPSDHMSLVAEFK 265 >gi|242034801|ref|XP_002464795.1| hypothetical protein SORBIDRAFT_01g026845 [Sorghum bicolor] gi|241918649|gb|EER91793.1| hypothetical protein SORBIDRAFT_01g026845 [Sorghum bicolor] Length = 295 Score = 43.2 bits (100), Expect = 0.036, Method: Composition-based stats. Identities = 19/155 (12%), Positives = 43/155 (27%), Gaps = 7/155 (4%) Query: 4 VTVATWNVNSI---RARIHNLAAWIKENNPDIICLQET---KTEDKNFPFETLQSLNYHI 57 + + WN + RA + L + NPD++ L ET K + +N + Sbjct: 1 MKILAWNCRGLASHRA-VRALLEVQRRENPDVLFLSETHLSKAKVENLKRKVGCEKFAIH 59 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 E+ G+ + + + D+ ++ I + Sbjct: 60 ESDGRSGGLLMLWKKEVVVRPVNISQYYIDVVMEEEEEWRLTGIYGDPYHKEQTWEAMRE 119 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG 152 S K ++ + + + Sbjct: 120 LKDSMKQEEIYWVQRARANWLKHGDKNTNFFHHFA 154 >gi|237716420|ref|ZP_04546901.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262408021|ref|ZP_06084569.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. 2_1_22] gi|229444067|gb|EEO49858.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262354829|gb|EEZ03921.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. 2_1_22] Length = 289 Score = 43.2 bits (100), Expect = 0.036, Method: Composition-based stats. Identities = 31/265 (11%), Positives = 69/265 (26%), Gaps = 25/265 (9%) Query: 4 VTVATWNVN-----SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 + VAT+N+ R +A I++ + +I +E + + Q + + Sbjct: 45 MRVATYNLQVETGTGWTNRRERVAQLIRDYDFEICGFEE--ASWEQRSYLGTQLASDYQI 102 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + + + LD + T I + N Sbjct: 103 LAYGRDTGNDDNKAGEMSGILYKKSRYTLLDAGRFWFSETPEIPSNGWDETNFKRFCVWG 162 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 K ++ + + + + + N E Sbjct: 163 KFKDSKTQKEFYLFETHMPLADNARKHACQMLVDAVSDKAKDNTPAFCTGDFNATPDAPE 222 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 + + A L++F RID I + Sbjct: 223 IAT-TICQSGILKDAYREAAVQHGALFTFPSKKT---------RIDFIFV--------KH 264 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263 A + + + SDH P+++ ++I Sbjct: 265 ATVLSTRTIVSSLSDHYPMVIVVEI 289 >gi|328767273|gb|EGF77323.1| hypothetical protein BATDEDRAFT_36021 [Batrachochytrium dendrobatidis JAM81] Length = 1267 Score = 43.2 bits (100), Expect = 0.036, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 8/44 (18%) Query: 2 SVVTVA--TWNVNSIRARIHNLAAWI---KENNPD--IICLQET 38 S + + +WNVN R +L W+ + +PD I+ QE Sbjct: 256 SKLKLCVGSWNVNG-RLASESLVPWLGSKEAEDPDMYILGFQEV 298 >gi|312194022|ref|YP_004014083.1| endonuclease/exonuclease/phosphatase [Frankia sp. EuI1c] gi|311225358|gb|ADP78213.1| Endonuclease/exonuclease/phosphatase [Frankia sp. EuI1c] Length = 324 Score = 43.2 bits (100), Expect = 0.036, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 9/44 (20%) Query: 221 IRIDHIMLSPEATSLLHSARIDTKPR-GWTKPSDHTPVIVSLDI 263 R+DH+++SP+ T+ T R G + SDH P++ L + Sbjct: 285 WRLDHVLISPQFTA--------TGLRVGKSYGSDHLPLVADLAL 320 >gi|225438271|ref|XP_002271965.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 2090 Score = 43.2 bits (100), Expect = 0.036, Method: Composition-based stats. Identities = 28/228 (12%), Positives = 56/228 (24%), Gaps = 28/228 (12%) Query: 33 ICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQA 92 CLQETK + + GV L Sbjct: 838 FCLQETKMTEMSL---------------------GVVRSLGVGRFLEWGALDARGAAGGV 876 Query: 93 RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG 152 + L +G + + S + + EE G Sbjct: 877 VVFWDNRVLELMGLEVGLFSISCRFKNVEDGFRWTFSGVYGPTLKRYREAFWEELGAIRG 936 Query: 153 DYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYA 212 + +N + N+ V S ++ + +R +++ + Sbjct: 937 LWTDPWCIEGDFNMTRFSNERRRGGRVSSSMRRFSEVIDELELRDLPLQGGPFTW----S 992 Query: 213 DSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 + RID ++S + + SDH P+++ Sbjct: 993 GGLNNQTMSRIDRFLVSEDWEGYFKGVV---QSTLSRPVSDHFPILLD 1037 >gi|188589668|ref|YP_001919752.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum E3 str. Alaska E43] gi|188499949|gb|ACD53085.1| endonuclease/exonuclease/phosphatase family protein [Clostridium botulinum E3 str. Alaska E43] Length = 262 Score = 43.2 bits (100), Expect = 0.037, Method: Composition-based stats. Identities = 44/267 (16%), Positives = 86/267 (32%), Gaps = 12/267 (4%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYHI 57 + + T N +S + +I LA I E + D I LQE ++ + N L+ N+ + Sbjct: 1 MKLLTLNCHSWQEENQIDKIKYLAKTIAEKDYDAIALQEVSQSINSNVIKSNLKYDNFAV 60 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 + + I + L + + + Y Sbjct: 61 LLKSELDKYNTNYNFFWDFSHIGYEKYEEGLAIFTKHNIVDEKSFFISKATDVEYWKT-R 119 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 I ++ I + + EEP + + + + N + D Sbjct: 120 RIVKLTFEYNNENIDIYSCHLGWWEDQEEPFKY--QVKKLLEENTSNNTTFFMGDFNNNA 177 Query: 178 EVRQ-SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 +R + L N G D + + + + + +R+D I+ + + +L Sbjct: 178 FIRNEGYDYLLNKGLIDTFTISKEADNGITVRGKIDGWDENKEKLRLDLILSNKKL-DVL 236 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263 S I SDH V VSL++ Sbjct: 237 TSKVIFNGI-NKDIISDHYGVEVSLNL 262 >gi|224013854|ref|XP_002296591.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220968943|gb|EED87287.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 625 Score = 43.2 bits (100), Expect = 0.037, Method: Composition-based stats. Identities = 19/140 (13%), Positives = 41/140 (29%), Gaps = 29/140 (20%) Query: 6 VATWNVNSIRARIHN-----------------LAAWIKEN-NPDIICLQETKTEDKNF-- 45 + +WNV ++ ++ A+++ + NP ++CLQE+K + Sbjct: 22 IISWNVAGLKPALNKIASDYGNNDKNKNKPHPFASYLSHHSNPTLLCLQESKIPHSHLSS 81 Query: 46 ---PFETLQSLNYHIETCG-----QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA 97 P Y + +NGV +K + + Sbjct: 82 RSEPHFCSSIPGYESFWSCATAEKCRGFNGVVTYAKQGCV-VRADCNPLGSVELDSQGRC 140 Query: 98 TFTINTQTLRIGNLYLPHGN 117 T + + + G Sbjct: 141 VMTDHGRWVCFNVYVPCGGG 160 Score = 41.3 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 11/92 (11%), Positives = 27/92 (29%), Gaps = 3/92 (3%) Query: 150 FAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL--QNMGFTDAIRATHDT-HHLYS 206 + ++ + WE + + + G D R + ++ Sbjct: 335 MSKIAHVTWDEGTLRSIAEWEGAGLNVDATPYLWGRGLLEEDGMVDVFRHLYPEAEGRFT 394 Query: 207 FWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 W + + N+G RID + + + Sbjct: 395 CWHQFMNKRYSNEGTRIDFTFVDSDLMRFVEK 426 >gi|312130303|ref|YP_003997643.1| endonuclease/exonuclease/phosphatase [Leadbetterella byssophila DSM 17132] gi|311906849|gb|ADQ17290.1| Endonuclease/exonuclease/phosphatase [Leadbetterella byssophila DSM 17132] Length = 363 Score = 43.2 bits (100), Expect = 0.037, Method: Composition-based stats. Identities = 31/250 (12%), Positives = 69/250 (27%), Gaps = 24/250 (9%) Query: 19 HNLAAWIKENNPDIICLQETKTEDKNFPFETL----QSLNYHIETCGQKSYN---GVAIL 71 + + N DI C QE + KNF ++ + + Y++ Q+ + G L Sbjct: 128 KGIGETVVGQNADIKCFQEFYNDSKNFDYDLIRRTAEKNPYYVYMHSQQGNDKGQGTIGL 187 Query: 72 SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWI 131 + + I+ + +N T+R+ N L + +D ++ Sbjct: 188 ATFSIYPIIRKEEMYWPTNNNGLLSTDIVVNGDTIRVINFQLKSMGIRVNKVFDHGLNK- 246 Query: 132 KRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191 L + + A E+ + + Sbjct: 247 ----VETKNILVQLKNGFSERGNEVNILESWINKSPYPVIIAGDLNELPYGYAYGKLRRL 302 Query: 192 TDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP 251 +++ + +RID+ + + + K Sbjct: 303 LLNAFEEEGRGFGFTY-------RKILRFLRIDNQFF-EAEKFKIVRFKTLHEY----KY 350 Query: 252 SDHTPVIVSL 261 SDH P++ Sbjct: 351 SDHYPLLGEY 360 >gi|295681288|ref|YP_003609862.1| endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1002] gi|295441183|gb|ADG20351.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1002] Length = 290 Score = 43.2 bits (100), Expect = 0.037, Method: Composition-based stats. Identities = 9/38 (23%), Positives = 18/38 (47%), Gaps = 4/38 (10%) Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 D + ++ + + + S +D R SDH P+ + L Sbjct: 256 DFVFVTQDLGTRIASCEVDPHSRS----SDHQPMWLEL 289 >gi|300773137|ref|ZP_07083006.1| endonuclease/exonuclease/phosphatase [Sphingobacterium spiritivorum ATCC 33861] gi|300759308|gb|EFK56135.1| endonuclease/exonuclease/phosphatase [Sphingobacterium spiritivorum ATCC 33861] Length = 645 Score = 43.2 bits (100), Expect = 0.038, Method: Composition-based stats. Identities = 45/285 (15%), Positives = 78/285 (27%), Gaps = 47/285 (16%) Query: 2 SVVTVATWNVN--SI-------RARIHNLAAWIKENNPDIICLQE-TKTEDKNFPFETLQ 51 ++V V WN+ + R+RI A I+ DII +QE +D Q Sbjct: 374 NLVRVLQWNIWHGGVHLGKEAGRSRI---ADLIRNTKADIITMQEGYSAQDS-----IAQ 425 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 +L +H++T N + + + IN LR Sbjct: 426 ALGFHLQT-KSSKDNLALLSRYPVESIKSSEPFKSNPAKIDLPNGKRILINDCWLRYAYR 484 Query: 112 YLPHGNPITSTKYDDKISWIKR-----------FLRFASQRLELEEPLIFAGDYN-IIPQ 159 + + P+I AGD+N Sbjct: 485 PEYTCAYQNTGMDPRIWIAEDSALALTDIRNLIEKDIDPYIDSPDMPVIIAGDFNSCSHM 544 Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK 219 + + + + GF+D+ R + + +++ Sbjct: 545 DWTERTRSLHYG---YGPVDFPVSKFMYEQGFSDSFRELNPDEL-----THQGGTFAPIY 596 Query: 220 G----IRIDHIMLSPEATSLLHSARIDTKPRGWT--KPSDHTPVI 258 G RID I S++I SDH V+ Sbjct: 597 GQLQNARIDFIYYKGGI--KAISSKIVRTSPDIDDIWASDHAAVL 639 >gi|254459775|ref|ZP_05073191.1| endonuclease/exonuclease/phosphatase [Rhodobacterales bacterium HTCC2083] gi|206676364|gb|EDZ40851.1| endonuclease/exonuclease/phosphatase [Rhodobacteraceae bacterium HTCC2083] Length = 329 Score = 43.2 bits (100), Expect = 0.038, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 20/52 (38%), Gaps = 12/52 (23%) Query: 223 IDHIMLSPEATSLLH-----------SARIDTKPRG-WTKPSDHTPVIVSLD 262 +D+IM+S + +D K R SDH PV + LD Sbjct: 277 LDYIMVSDDLRYKAKTWRIWHPFDDPECWVDLKLRDALLTASDHFPVTLDLD 328 >gi|261404204|ref|YP_003240445.1| 5'-Nucleotidase domain-containing protein [Paenibacillus sp. Y412MC10] gi|261280667|gb|ACX62638.1| 5'-Nucleotidase domain protein [Paenibacillus sp. Y412MC10] Length = 2084 Score = 43.2 bits (100), Expect = 0.038, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 30/81 (37%), Gaps = 16/81 (19%) Query: 200 DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP------SD 253 Y++ Y +S +DHI++S T S ++D P SD Sbjct: 1075 PLKEQYTY-TYDGNSQV------LDHILVSKNLT---RSTQVDIVHLNADFPASKGRVSD 1124 Query: 254 HTPVIVSLDIPEPRKKQQDST 274 H PV+ +D+ E T Sbjct: 1125 HDPVVAQIDLKEEAVDGFPLT 1145 >gi|149689206|gb|ABR27973.1| salivary inositol polyphosphate 5-phosphatase [Triatoma infestans] Length = 318 Score = 43.2 bits (100), Expect = 0.038, Method: Composition-based stats. Identities = 45/307 (14%), Positives = 84/307 (27%), Gaps = 70/307 (22%) Query: 6 VATWNVN------SIRARIHNLAAWIKENNPDI--ICLQETKTED--------------K 43 V TWNV S++ + ++ E NPDI I LQE Sbjct: 31 VVTWNVAEKDPPGSVKELLGQVSDS-SEVNPDIVIIGLQELTMNPVQAVVNNIFKDKWSD 89 Query: 44 NFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDD--------LDVQARFI 95 +F NYH + + K + + + + + Sbjct: 90 DFNEILKSRNNYHKVYSESLLGILLKGIVKIKYKDSINKKADATTVKTGLGGMSGNKGAV 149 Query: 96 EATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYN 155 F +N + I N +L + + + + + + + + GD N Sbjct: 150 ILKFQLNNRWFCIVNSHLAAHDEKL---QERIEDYKTINNKRVDFCNKPSDFIFWLGDLN 206 Query: 156 IIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY---------- 205 Q I ++ + Q N + ++ + Sbjct: 207 FRLQEDVEDEKIRNWVQQRKYADLLKLDQLKINKQTKEIFTDFNEKEITFAPTFKLEKGT 266 Query: 206 -SFWDYYADSWSKNKGIRIDHIM--------LSPEATSLLHSARIDTKPRGWTKPSDHTP 256 ++ +W+ D I+ ++P + S K SDH P Sbjct: 267 GTYSTKRRPAWT-------DRILYKSDTKKNITPTLYKSIESY----------KHSDHYP 309 Query: 257 VIVSLDI 263 V DI Sbjct: 310 VQAQFDI 316 >gi|281352255|gb|EFB27839.1| hypothetical protein PANDA_007669 [Ailuropoda melanoleuca] Length = 113 Score = 43.2 bits (100), Expect = 0.039, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 36/110 (32%), Gaps = 12/110 (10%) Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 E R L M R H YSF+ ++S R+DHI+ Sbjct: 1 KQKINKETRALNVILDQMDLIGIYRTLHSRTTEYSFFSNAHGTFS-----RVDHILGQKT 55 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 + + SDH + + L+ K ++S + ++ I Sbjct: 56 GLNRYQKTEVIPCI-----FSDHNALKLELN--HKEKSGRNSNTWKVRTI 98 >gi|126650018|ref|ZP_01722251.1| endonuclease/exonuclease/phosphatase family protein [Bacillus sp. B14905] gi|126593190|gb|EAZ87152.1| endonuclease/exonuclease/phosphatase family protein [Bacillus sp. B14905] Length = 1275 Score = 43.2 bits (100), Expect = 0.040, Method: Composition-based stats. Identities = 13/73 (17%), Positives = 31/73 (42%), Gaps = 10/73 (13%) Query: 200 DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT---KPSDHTP 256 ++++ + N + +DHI++S ++ I + SDH P Sbjct: 1095 PETDRFTYF------FQGNNQV-LDHILVSNNLANVTAIDLIHINANFTEAQGRASDHDP 1147 Query: 257 VIVSLDIPEPRKK 269 V+V +D+ +++ Sbjct: 1148 VLVQIDLKAGKEE 1160 >gi|330806705|ref|YP_004351167.1| Putative endonuclease/exonuclease/phosphatase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|253559456|gb|ACT32417.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas fluorescens] gi|327374813|gb|AEA66163.1| Putative endonuclease/exonuclease/phosphatase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 292 Score = 43.2 bits (100), Expect = 0.040, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 14/59 (23%) Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 +F + +DHI+LSP T L + +P SDH PV V + +P Sbjct: 228 TFPSWRPQ-------RCLDHILLSPTLT--LERVEVLAQP-----ISDHLPVAVEIRLP 272 >gi|163860141|gb|ABY41236.1| probable endonuclease/exonuclease/phosphatase family protein [Pseudomonas fluorescens] Length = 292 Score = 43.2 bits (100), Expect = 0.040, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 14/59 (23%) Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 +F + +DHI+LSP T L + +P SDH PV V + +P Sbjct: 228 TFPSWRPQ-------RCLDHILLSPTLT--LERVEVLAQP-----ISDHLPVAVEIRLP 272 >gi|311063871|ref|YP_003970596.1| hypothetical protein BBPR_0452 [Bifidobacterium bifidum PRL2010] gi|310866190|gb|ADP35559.1| Conserved hypothetical membrane spanning protein with Endonuclease/Exonuclease/phosphatase family domain [Bifidobacterium bifidum PRL2010] Length = 371 Score = 43.2 bits (100), Expect = 0.041, Method: Composition-based stats. Identities = 38/264 (14%), Positives = 69/264 (26%), Gaps = 51/264 (19%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTED--KNFPFETLQSLNYHIETCGQ 62 V T+NV A + +++ +++ LQET T D K + S + + Sbjct: 149 RVMTFNVYKGHADAKAIVDIVRDQRVEVLALQET-TNDFVKKLDEAGIHSYLPYSQVSSS 207 Query: 63 KSYNGVAILSKYQPIEIVTHLPGD--DLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 G I S + V G + + + G Sbjct: 208 DGVYGNGIWSATELGRPVDDEVGSSASFMPGGTVTFGGGKAQLRFVSVHTTAPIPG---- 263 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 W + AS R +F GD+N N + Sbjct: 264 -----YWSRWKRSLDELASMRSHEGSRYVFMGDFNATTDHTPFRNILGN----------- 307 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS---LLH 237 +++ + G IDHI+L + + + Sbjct: 308 ----------RFSDAARQSGHGFTFTWPSNKLPL-PRFAG--IDHIVLDKDIIAGQMQVK 354 Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261 S SDH ++ ++ Sbjct: 355 SV----------AGSDHAALLATI 368 >gi|282880129|ref|ZP_06288849.1| endonuclease/exonuclease/phosphatase family protein [Prevotella timonensis CRIS 5C-B1] gi|281306002|gb|EFA98042.1| endonuclease/exonuclease/phosphatase family protein [Prevotella timonensis CRIS 5C-B1] Length = 311 Score = 43.2 bits (100), Expect = 0.041, Method: Composition-based stats. Identities = 38/292 (13%), Positives = 71/292 (24%), Gaps = 50/292 (17%) Query: 6 VATWNV-----------NSIRARIHNLAAWIKENNPDIICLQE-TKTEDKNFPFETLQSL 53 VAT+N+ N R + ++ PDI QE K + ++ Q Sbjct: 24 VATYNLRYDNEDDRQEGNGWTKRCQVICDFLNFEQPDIFGTQEGLKHQLEDLKRGLDQ-- 81 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 Y G++ S + E + Sbjct: 82 -YDYIGIGREDGKEQGEHSAIFYKKDKLKCFDKGNFWLNETPEKPVLGWDAACVRICTWG 140 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + T+ + + A + + + ++D Sbjct: 141 KFRDWKTNLTFYFFNLHMDHVGVVARREAAKLVIKKIKEIAGNNAPVILTGDFNVDQHDE 200 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 + + K + S ++S RIDHI +S + Sbjct: 201 IYKIFSESGILKDSYVAAKHRFAENGTFQDFDS--SMKSES-------RIDHIFVSNKFE 251 Query: 234 SLLHSARIDTKPR--GWTK----------------------PSDHTPVIVSL 261 +++ I T K PSDH PV+ + Sbjct: 252 --VNNYAIHTDAYWTANEKMPKLKSGNAPKELEFQQYTHRLPSDHYPVLAKI 301 >gi|270016726|gb|EFA13172.1| hypothetical protein TcasGA2_TC001813 [Tribolium castaneum] Length = 970 Score = 43.2 bits (100), Expect = 0.041, Method: Composition-based stats. Identities = 38/260 (14%), Positives = 69/260 (26%), Gaps = 49/260 (18%) Query: 13 SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILS 72 S++ +I L A++ NN DI+ + ETK P + NY+I + A Sbjct: 351 SVKQKIDELIAFLHSNNVDILAISETKLT----PNDRFYIQNYNIIRQDRVDGTNAAGGV 406 Query: 73 KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIK 132 + ++ + + I N + + + Sbjct: 407 AILVKKGISFSKLTLPRTTIEAVGIKLANQIHFIAIYNRPCYNISQRDLENLN------- 459 Query: 133 RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192 + +I AGD+N C+ N Sbjct: 460 ----------NIGNKVIIAGDFNATHNTWGCHRNNTSGNTIYNLSISNNIIINHPRSPTH 509 Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPS 252 + T ID I+ D + S Sbjct: 510 FPSNNSTPTV--------------------IDLILTKNFLLEN------DPQSLSQLN-S 542 Query: 253 DHTPVIVSL-DIPEPRKKQQ 271 DH PVI + ++P+ + +Q Sbjct: 543 DHNPVIFEISNLPKDKDNRQ 562 >gi|227537026|ref|ZP_03967075.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC 33300] gi|227243118|gb|EEI93133.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC 33300] Length = 674 Score = 43.2 bits (100), Expect = 0.041, Method: Composition-based stats. Identities = 43/285 (15%), Positives = 77/285 (27%), Gaps = 47/285 (16%) Query: 2 SVVTVATWNVN--SI-------RARIHNLAAWIKENNPDIICLQE-TKTEDKNFPFETLQ 51 ++V V WN+ + R+RI I+ DII +QE +D Q Sbjct: 403 NLVRVLQWNIWHGGVHLGKEAGRSRI---TDLIRSAKADIITMQEGYSAQDS-----IAQ 454 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 +L +H++T N + + + +N LR Sbjct: 455 ALGFHLQT-KSSKDNLALLSRYPVESIKSSEPFKSNPAKIDLPNGKRILVNDCWLRYAYR 513 Query: 112 YLPHGNPITSTKYDDKISWIKR-----------FLRFASQRLELEEPLIFAGDYN-IIPQ 159 + + P+I AGD+N Sbjct: 514 PEYTCAYQNTGMDPQTWIAEDAVLALTDIRNLMEKDVNPYIESPDMPVIIAGDFNSCSHL 573 Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK 219 + + + + + GF D+ R + + +++ Sbjct: 574 DWTERTRSLHYG---YGPVAFPTSKFMYEQGFKDSFREMNPDEL-----THQGGTFAPIY 625 Query: 220 G----IRIDHIMLSPEATSLLHSARIDTKPRGWT--KPSDHTPVI 258 G RID I S++I SDH V+ Sbjct: 626 GQLQNARIDFIYYKGGI--KAISSKIVRTSPDIDDVWASDHAAVL 668 >gi|167823858|ref|ZP_02455329.1| endonuclease/exonuclease/phosphatase family superfamily protein [Burkholderia pseudomallei 9] Length = 125 Score = 43.2 bits (100), Expect = 0.041, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 4/38 (10%) Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 D ++ L ID G + SDH P+++ L Sbjct: 89 DFAFVTDTLVRRLSRCEID----GTVRASDHQPIVLEL 122 >gi|257125417|ref|YP_003163531.1| endonuclease/exonuclease/phosphatase [Leptotrichia buccalis C-1013-b] gi|257049356|gb|ACV38540.1| Endonuclease/exonuclease/phosphatase [Leptotrichia buccalis C-1013-b] Length = 248 Score = 43.2 bits (100), Expect = 0.042, Method: Composition-based stats. Identities = 33/259 (12%), Positives = 73/259 (28%), Gaps = 43/259 (16%) Query: 15 RARIH--NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN-YHIETCGQKSYNGVAIL 71 R+ H + +I + PDI+ L E L + + + Q + G Sbjct: 29 RSVRHIYRIGKFINKYKPDIVGLVEV-------------DLGSFRMYSRNQATLLGRITR 75 Query: 72 SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWI 131 + R LR YL G + + + + Sbjct: 76 NNNVYQYKYEEDSNYMKFPMVRKQGNALLSKKPVLREEFHYLDIGMKKLIIEVETEDVVV 135 Query: 132 KRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY-NPIIWENDACFTLEVRQSFQKLQNMG 190 + ++ + +P + ++ + + ++ S + N+ Sbjct: 136 FLVHLALGGKTRQKQIVQLYNFVKNCKKPVIVAGDFNVFWGEEEIEMFLQASNLRNINIR 195 Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 + + +D I+ S E + S + T+ Sbjct: 196 KDPTFPSWNPKRE-------------------LDFILCSKEI--KVKSYEVI-----QTQ 229 Query: 251 PSDHTPVIVSLDIPEPRKK 269 SDH P++V +I + K+ Sbjct: 230 LSDHLPILVDFEIVKSEKR 248 >gi|319784539|ref|YP_004144015.1| endonuclease/exonuclease/phosphatase [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317170427|gb|ADV13965.1| Endonuclease/exonuclease/phosphatase [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 348 Score = 43.2 bits (100), Expect = 0.042, Method: Composition-based stats. Identities = 41/257 (15%), Positives = 67/257 (26%), Gaps = 46/257 (17%) Query: 19 HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIE 78 + + I NPD+I L E + Y I GVA+LS+ Sbjct: 122 KKVLSLIGRTNPDVITLDEVSAMWATELGYISSAYPYRILCPYPNKIFGVALLSRRPFAA 181 Query: 79 IVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFA 138 G + + R AT T++ + + + + + Sbjct: 182 ------GTEARCERRGAMATATVDFGGIDVDVAAIHLS-------WPWPREQYWQIGELT 228 Query: 139 SQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT 198 L E I AGD N P Sbjct: 229 EPLSALGETAIMAGDCNAAPWSAAVRRVAALGGLTVMPSAGP------------------ 270 Query: 199 HDTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257 ++ + + G+ ID + S I + R SDH PV Sbjct: 271 -------TWIHIRLPDFLRRFAGLPIDQVF-SKG------GVTIHSATRLEDTGSDHLPV 316 Query: 258 IVSLDIPEPRKKQQDST 274 +V + ++K D Sbjct: 317 MVEFSLRLNQQKPLDEH 333 >gi|2129709|pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW15) - Arabidopsis thaliana retrotransposon Ta11-1 gi|976278|gb|AAA75254.1| reverse transcriptase [Arabidopsis thaliana] Length = 1333 Score = 43.2 bits (100), Expect = 0.042, Method: Composition-based stats. Identities = 35/262 (13%), Positives = 72/262 (27%), Gaps = 35/262 (13%) Query: 4 VTVATWNVNSIR----ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 +++ +WN + I L + P+++ L ETK N + + L Y Sbjct: 1 MSLVSWNCQGLGWSQDLTIPRLMEMRLSHFPEVLFLMETK-NCSNVVVDLQEWLGYERVF 59 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 LS + + I+ + + +Y Sbjct: 60 TVNP-----IGLSGGLALFWKKGVDIVIKYADKNLIDFQIQFGSHEFYVSCVYGNPAFSD 114 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 ++ + + +EP GD+N I + D+ F Sbjct: 115 KHLVWE----------KITRIGINRKEPWCMLGDFNPILH-NGEKRGGPRRGDSSFLPFT 163 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + + +++ + W + R+D + Sbjct: 164 DMLDSC--------DMLELPSIGNPFTWGGKTNEMWIQ---SRLDRCFGNKN---WFRFF 209 Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261 I + + SDH PV+V L Sbjct: 210 PISNQEFLDKRGSDHRPVLVRL 231 >gi|86142990|ref|ZP_01061412.1| Endonuclease/exonuclease/phosphatase [Leeuwenhoekiella blandensis MED217] gi|85830435|gb|EAQ48894.1| Endonuclease/exonuclease/phosphatase [Leeuwenhoekiella blandensis MED217] Length = 362 Score = 43.2 bits (100), Expect = 0.042, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 21/54 (38%), Gaps = 7/54 (12%) Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDST 274 +DHI +S + + RG SDH P L + +K +Q + Sbjct: 288 WPLDHIFVSEHFRAK----EVL---RGNDVGSDHFPAYAELTLESDKKDEQTPS 334 >gi|323356483|ref|YP_004222879.1| metal-dependent hydrolase [Microbacterium testaceum StLB037] gi|323272854|dbj|BAJ72999.1| metal-dependent hydrolase [Microbacterium testaceum StLB037] Length = 278 Score = 43.2 bits (100), Expect = 0.042, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 2/50 (4%) Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQ 270 RID ++ +P+ + + ID +P G PSDH PV + I + Sbjct: 231 RRIDALLATPDVG--VRAVGIDPRPTGTQWPSDHLPVQAVVRIHPGSDAR 278 >gi|319650796|ref|ZP_08004935.1| hypothetical protein HMPREF1013_01541 [Bacillus sp. 2_A_57_CT2] gi|317397653|gb|EFV78352.1| hypothetical protein HMPREF1013_01541 [Bacillus sp. 2_A_57_CT2] Length = 926 Score = 43.2 bits (100), Expect = 0.043, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 29/75 (38%), Gaps = 12/75 (16%) Query: 202 HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGW----TKPSDHTPV 257 Y++ +Y ++ +DHI++S I G+ + SDH PV Sbjct: 734 EERYTY-NYQGNAQV------LDHILVSNNLAKK-TEVDILHINSGFMEEHGRASDHDPV 785 Query: 258 IVSLDIPEPRKKQQD 272 ++ + K ++ Sbjct: 786 MIQTSLKPSVKPEEP 800 >gi|309800613|ref|ZP_07694757.1| exodeoxyribonuclease III [Streptococcus infantis SK1302] gi|308115759|gb|EFO53291.1| exodeoxyribonuclease III [Streptococcus infantis SK1302] Length = 269 Score = 43.2 bits (100), Expect = 0.043, Method: Composition-based stats. Identities = 35/274 (12%), Positives = 82/274 (29%), Gaps = 22/274 (8%) Query: 4 VTVATWNVNSIRARIHN--------LAAWIKENNPDIICLQE-----TKTEDKNFPF--E 48 + T N +S + L I EN+ D+IC QE T + + P Sbjct: 1 MKFLTLNTHS---WMEKNPEQKFQLLLQDILENSYDLICFQEINQEITSAQVETAPLYQP 57 Query: 49 TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108 + H + + +A + + G D + I + I + + + Sbjct: 58 LPSAEPIHQDHYVRLLVEKLAEHGQNYYWTWAYNHIGYDRYHEGVAILSKTPIEAREILV 117 Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG-DYNIIPQPHDCYNPI 167 ++ P + + K + ++ + + + + + Sbjct: 118 SDVDDPTDYHTRRVALAETVVEGKELAVASVHLSWWDKGFQEEWARFEAVLKELNKSLLL 177 Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227 + + E Q+ + DA + Y+ ++ +RID+I Sbjct: 178 AGDFNNPAGQEGYQAILASP-LDLQDAYEVAKERSGSYTVPPEIDGWKGNSEPLRIDYIF 236 Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + + + + + + SDH + L Sbjct: 237 TTKDV--QVEKLHVVFDGKNSPQVSDHYGLQAEL 268 >gi|307330479|ref|ZP_07609622.1| Endonuclease/exonuclease/phosphatase [Streptomyces violaceusniger Tu 4113] gi|306883904|gb|EFN14947.1| Endonuclease/exonuclease/phosphatase [Streptomyces violaceusniger Tu 4113] Length = 279 Score = 43.2 bits (100), Expect = 0.043, Method: Composition-based stats. Identities = 14/36 (38%), Positives = 23/36 (63%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQE 37 +VV V ++N+ S+R LA I+ PD++C+QE Sbjct: 16 AVVRVLSYNIRSMRDDREALARVIRACTPDVVCVQE 51 >gi|294941672|ref|XP_002783182.1| carbon catabolite repressor protein, putative [Perkinsus marinus ATCC 50983] gi|239895597|gb|EER14978.1| carbon catabolite repressor protein, putative [Perkinsus marinus ATCC 50983] Length = 320 Score = 43.2 bits (100), Expect = 0.043, Method: Composition-based stats. Identities = 42/289 (14%), Positives = 82/289 (28%), Gaps = 55/289 (19%) Query: 9 WNVNSIRARIHNLAAWIKENNPDIICLQETKTED--KNFPFETLQSLNYHIETCGQKSYN 66 WN+ R+ L E++ DI+CL E D ++F + + + Sbjct: 56 WNM-----RLPMLVKTCLESSADILCLCE---MDSYEDFRQALGSYYDGYFAPRAGGRDD 107 Query: 67 GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDD 126 G AI + +++++ R N + + Sbjct: 108 GSAIFWRRSILKLMSAKTLHYTGGSERVAAICRLQNLYGQTFTVVGTHLYWKGSCPTQSH 167 Query: 127 KISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL 186 + + L+ +EP+I GD N + D + I + Sbjct: 168 E---VDELTTELRAILDRDEPVILCGDLN-NHRDSDTFMRIRDCGMEDCFTAAGLKPPRY 223 Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR--IDHIML---SPEATSLLHSAR- 240 ++ + + S+ G ID+I + S + T + A Sbjct: 224 TSLVPPSYVL------------SSRSGSYRLLPGREDEIDYIFVGGQSSDLTFKVVDAVA 271 Query: 241 ID-----------------------TKPRGWTKPSDHTPVIVSLDIPEP 266 ID + SDH PV+ +++ P Sbjct: 272 IDSCNDETGNGVVTGADSRDSSVAERGIPNMSHASDHLPVMCEVELTGP 320 >gi|225864161|ref|YP_002749539.1| putative secreted protein [Bacillus cereus 03BB102] gi|225789553|gb|ACO29770.1| putative secreted protein [Bacillus cereus 03BB102] Length = 264 Score = 43.2 bits (100), Expect = 0.043, Method: Composition-based stats. Identities = 40/278 (14%), Positives = 77/278 (27%), Gaps = 35/278 (12%) Query: 3 VVTVATWNV-N--SI-RARIHNLAAWIKENNPDIICLQETKT-----EDKNFPFETLQSL 53 ++ +AT+N+ N S+ R+ + I+ +P I+ LQE ++ KN + Sbjct: 7 ILRIATFNIWNHESLWFERLEAICEEIRSISPHILALQEVRSSVNLNSKKNVAQYIAGQI 66 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 Y + + L+ I I ++ + E+ + T Sbjct: 67 GYPFCIFKEYPDSPDEGLAFLSKIPI----IAEEAIWETDIEESNYCAIRITFTYKGCKF 122 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 N + K + + + L+ + Y D Sbjct: 123 GVTNVHLNWKSSRIRQEQMNTVNNWIENRASDYELLCGDFNDDPFSMVHQYLIRKHWIDV 182 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 E+ ++ + + D R D IM+ Sbjct: 183 AQFKEIEENMIAQPTLDYRKNPNLKDDVKQE----------------KRYDWIMIQENTA 226 Query: 234 ---SLLHSARIDTK---PRGWTKPSDHTPVIVSLDIPE 265 + + I + PSDH V V L E Sbjct: 227 FEFPTIENVSIFGESALTSTGMFPSDHYGVFVDLKFNE 264 >gi|167738257|ref|ZP_02411031.1| endonuclease/exonuclease/phosphatase family superfamily protein [Burkholderia pseudomallei 14] Length = 115 Score = 43.2 bits (100), Expect = 0.043, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 4/38 (10%) Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 D ++ L ID G + SDH P+++ L Sbjct: 79 DFAFVTDTLVRRLSRCEID----GTVRASDHQPIVLEL 112 >gi|147778443|emb|CAN63032.1| hypothetical protein VITISV_024672 [Vitis vinifera] Length = 1413 Score = 43.2 bits (100), Expect = 0.043, Method: Composition-based stats. Identities = 31/244 (12%), Positives = 63/244 (25%), Gaps = 29/244 (11%) Query: 18 IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPI 77 + L ++E P++I L ET E LNY S Sbjct: 358 VRLLTNLVREKKPEVIFLIETFCTSARI-SEIANKLNYE--------------GSYGVNC 402 Query: 78 EIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF 137 + G + + + ++ + Sbjct: 403 RGHSAGLGLIWRCKDKVTILGSHDRYIDAIVTLENQRMFRLTGFYGLANRSQRSSSWEIL 462 Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA 197 + P GD+N + + + L ++G+ Sbjct: 463 RNLHAAHSLPWCVIGDFNELMHQSEKCGNHPHPGSLIEAFRQVVTNCGLSDLGYVGY--- 519 Query: 198 THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257 Y++ ++ R+D ++S + L H + + SDH PV Sbjct: 520 ------AYTW--ERGRGTTRWVEERLDRALVSADWKHLFHQS---RLIHLFVSTSDHLPV 568 Query: 258 IVSL 261 ++ L Sbjct: 569 LLEL 572 >gi|325117381|emb|CBZ52933.1| Carbon catabolite repressor protein, related [Neospora caninum Liverpool] Length = 1483 Score = 43.2 bits (100), Expect = 0.043, Method: Composition-based stats. Identities = 15/91 (16%), Positives = 23/91 (25%), Gaps = 2/91 (2%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQP 76 R + I +NPD++CLQE + ++F L L H K S Sbjct: 1004 RRQRILDEILTHNPDVVCLQEV--QSEHFEDFFLPELARHGYNGMYKQKTMEIFTSGSGK 1061 Query: 77 IEIVTHLPGDDLDVQARFIEATFTINTQTLR 107 + Sbjct: 1062 KSGGKFTMDGCATFYRKSKFTIVDQCGLEFS 1092 >gi|167918661|ref|ZP_02505752.1| endonuclease/exonuclease/phosphatase family superfamily protein [Burkholderia pseudomallei BCC215] Length = 114 Score = 43.2 bits (100), Expect = 0.043, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 4/38 (10%) Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 D ++ L ID G + SDH P+++ L Sbjct: 78 DFAFVTDTLVRRLSRCEID----GTVRASDHQPIVLEL 111 >gi|159028952|emb|CAO87413.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 1628 Score = 43.2 bits (100), Expect = 0.043, Method: Composition-based stats. Identities = 10/46 (21%), Positives = 24/46 (52%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268 +DHI+++ S + +P+DH P++ +L++P+ + Sbjct: 729 LDHILITNNLASKAEYDIVRVNVDFLDQPADHEPILATLNLPQQSQ 774 >gi|152964513|ref|YP_001360297.1| endonuclease/exonuclease/phosphatase [Kineococcus radiotolerans SRS30216] gi|151359030|gb|ABS02033.1| Endonuclease/exonuclease/phosphatase [Kineococcus radiotolerans SRS30216] Length = 344 Score = 43.2 bits (100), Expect = 0.043, Method: Composition-based stats. Identities = 12/56 (21%), Positives = 21/56 (37%), Gaps = 3/56 (5%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFE-TLQSLNYHIE 58 + VAT+N + R L ++ PD++ LQE + + Y Sbjct: 105 LRVATFNTTNWRGA-EGLEDLLRRGRPDVVALQEV-VPSQQRDYAGVFPEYPYRSY 158 >gi|213964132|ref|ZP_03392371.1| endonuclease/exonuclease/phosphatase family protein [Capnocytophaga sputigena Capno] gi|213953225|gb|EEB64568.1| endonuclease/exonuclease/phosphatase family protein [Capnocytophaga sputigena Capno] Length = 253 Score = 43.2 bits (100), Expect = 0.044, Method: Composition-based stats. Identities = 42/272 (15%), Positives = 72/272 (26%), Gaps = 32/272 (11%) Query: 3 VVTVATWNVNSIRARIHN--------LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 + +ATWNV R + I+E N D++ L E + L + Sbjct: 1 MYKIATWNV----ERPKKGTQKTALAIVK-IEELNADVLVLTE---NATSISLTELYPFS 52 Query: 55 YHI-ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 H + V+I SK+Q E + T+ + Sbjct: 53 VHSLSYERTPEEHWVSIFSKWQITEQIQTFDNYRTACAVIKSPFGDITVFGTIIPYHQAG 112 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 G + Y K + A + I N + D Sbjct: 113 VSGIKYGNLGYKQWEYHEKDLHQQAK-----DWERITKKTQNPLWVMGDFNQSRYNHQGY 167 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 + + + T + D + N IDHI +S Sbjct: 168 GTEKVRQLLSDY---LKKLNLTCVTEGDLSPFLHPDPIKNKIRNN----IDHICISNSFM 220 Query: 234 SLLHSARI---DTKPRGWTKPSDHTPVIVSLD 262 + + ++ D SDH V +S + Sbjct: 221 LKMKAYQVGAWDHFNEEGKYMSDHNGVFISFE 252 >gi|167533155|ref|XP_001748258.1| hypothetical protein [Monosiga brevicollis MX1] gi|163773378|gb|EDQ87019.1| predicted protein [Monosiga brevicollis MX1] Length = 372 Score = 43.2 bits (100), Expect = 0.044, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 15/44 (34%), Gaps = 6/44 (13%) Query: 222 RIDHIMLSPEATS--LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 RID+I + + ID SDH PVI Sbjct: 331 RIDYIYTNRAWEDHLRCTNCIIDR----GNVSSDHKPVIADFAW 370 >gi|89071355|ref|ZP_01158492.1| endonuclease/exonuclease/phosphatase family protein [Oceanicola granulosus HTCC2516] gi|89043144|gb|EAR49387.1| endonuclease/exonuclease/phosphatase family protein [Oceanicola granulosus HTCC2516] Length = 232 Score = 43.2 bits (100), Expect = 0.044, Method: Composition-based stats. Identities = 9/44 (20%), Positives = 21/44 (47%), Gaps = 11/44 (25%) Query: 3 VVTVATWNVNSIRARI--------HNLAAWIKENNPDIICLQET 38 + +A++N IR + H + +++ + D++ LQE Sbjct: 2 TLRLASYN---IRKCLGTDRRRDPHRILQVLRQADADVVALQEV 42 >gi|242033909|ref|XP_002464349.1| hypothetical protein SORBIDRAFT_01g016750 [Sorghum bicolor] gi|241918203|gb|EER91347.1| hypothetical protein SORBIDRAFT_01g016750 [Sorghum bicolor] Length = 384 Score = 43.2 bits (100), Expect = 0.044, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 7/43 (16%) Query: 2 SVVTVATWNVNS------IRARIHNLAAWIKENNPDIICLQET 38 V + T+NV IR R++ + I+ ++PD+IC QE Sbjct: 114 KTVKIMTYNVWFREELELIR-RMNAIGDLIQHHSPDLICFQEV 155 >gi|242826100|ref|XP_002488573.1| hypothetical protein TSTA_109970 [Talaromyces stipitatus ATCC 10500] gi|218712391|gb|EED11817.1| hypothetical protein TSTA_109970 [Talaromyces stipitatus ATCC 10500] Length = 231 Score = 43.2 bits (100), Expect = 0.044, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 16/44 (36%), Gaps = 4/44 (9%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEP 266 ID ++ S + I G SDH + D+P P Sbjct: 72 IDLVLASENLIDSMVKCAIH----GTEHGSDHRAIKTVFDVPRP 111 >gi|254883467|ref|ZP_05256177.1| metallophosphoesterase [Bacteroides sp. 4_3_47FAA] gi|319641746|ref|ZP_07996428.1| metallophosphoesterase [Bacteroides sp. 3_1_40A] gi|254836260|gb|EET16569.1| metallophosphoesterase [Bacteroides sp. 4_3_47FAA] gi|317386633|gb|EFV67530.1| metallophosphoesterase [Bacteroides sp. 3_1_40A] Length = 251 Score = 43.2 bits (100), Expect = 0.045, Method: Composition-based stats. Identities = 41/267 (15%), Positives = 75/267 (28%), Gaps = 61/267 (22%) Query: 4 VTVATWNV-NSI----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL----N 54 + + ++N+ N I + +A I + NPD++ LQE + P L+ + Sbjct: 31 LRIMSYNIHNGIGMDGKVDYARIANVISDVNPDVVALQELDSITHRSPVNVLEEIASVTG 90 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 + SY G E ++ L + + + + + Sbjct: 91 MNYVFGPAISYGGGKYGIGVMSKEKPLNVRNVSLPGREEARTLLVVEFEKYIFLATHFSL 150 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 IK + E+P+ AGD N +P N + Sbjct: 151 TA-----------ADQIKSIEVILKEVFSKEKPVFMAGDMNSVPSSLTQKNIRKYFK--- 196 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI-DHIMLSPEAT 233 L + + D + Y + ++ + RI DH+ Sbjct: 197 ----------VLTDDRWITCNGECIDYIYGY---EKKKGKFAVRRKGRIEDHV------- 236 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVS 260 SDH PV V Sbjct: 237 -----------------ASDHCPVYVD 246 >gi|327273914|ref|XP_003221724.1| PREDICTED: nocturnin-like [Anolis carolinensis] Length = 375 Score = 43.2 bits (100), Expect = 0.045, Method: Composition-based stats. Identities = 35/260 (13%), Positives = 61/260 (23%), Gaps = 20/260 (7%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFE--TLQSLNYHIET--CGQKSYNGVAILSKYQP 76 + I PDI+CLQE D F L + Y V + Sbjct: 123 ILEEILAYQPDILCLQEV---DHYFDTFQPLLSRMGYQCTFLPKPWSPCLDVECNNGPDG 179 Query: 77 IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 + L + T + I + + + Sbjct: 180 CALFFLKDRFSLVKSTNIRLTAMKLKTNQVAIAQILKCN-ETDRLFCIAVTHLKARNGWE 238 Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIR 196 + + P + E S L + + Sbjct: 239 RFRYAQGADLLENLKRITHEAEIPLIVCGDFNADPTEEVYKEFSTSSLNLNSAYKLLSAD 298 Query: 197 ATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP------EATSLLHSARIDTKPR-GWT 249 + Y+ W ++ +D+I S A SLL +I + Sbjct: 299 GL--SEPPYTTWKIRPSGECRHT---LDYIWYSQHALKVDSALSLLTEEQIGPNRLPSFN 353 Query: 250 KPSDHTPVIVSLDIPEPRKK 269 PSDH ++ E + Sbjct: 354 YPSDHLSLVCDFTFNEDPDR 373 >gi|325273997|ref|ZP_08140156.1| endonuclease/exonuclease/phosphatase [Pseudomonas sp. TJI-51] gi|324100886|gb|EGB98573.1| endonuclease/exonuclease/phosphatase [Pseudomonas sp. TJI-51] Length = 284 Score = 43.2 bits (100), Expect = 0.045, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 14/60 (23%) Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 +F + +DHI+LS T L + +P SDH PV V + +P+ Sbjct: 228 TFPSWRPQ-------RCLDHILLSSSLT--LERVEVLAQP-----ISDHLPVAVEIRLPD 273 >gi|313496499|gb|ADR57865.1| Endonuclease/exonuclease/phosphatase [Pseudomonas putida BIRD-1] Length = 284 Score = 43.2 bits (100), Expect = 0.045, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 14/60 (23%) Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 +F + +DHI+LS T L + +P SDH PV V + +P+ Sbjct: 228 TFPSWRPQ-------RCLDHILLSSSLT--LERVEVLAQP-----ISDHLPVAVEIRLPD 273 >gi|205373613|ref|ZP_03226416.1| putative exodeoxyribonuclease [Bacillus coahuilensis m4-4] Length = 46 Score = 43.2 bits (100), Expect = 0.045, Method: Composition-based stats. Identities = 9/30 (30%), Positives = 12/30 (40%) Query: 29 NPDIICLQETKTEDKNFPFETLQSLNYHIE 58 + DI CLQETK + + Y Sbjct: 2 DADIFCLQETKVQYGQIELDLPGYYQYWNY 31 >gi|148238331|ref|NP_001089542.1| angel homolog 2 [Xenopus laevis] gi|66911787|gb|AAH97844.1| MGC115586 protein [Xenopus laevis] Length = 536 Score = 43.2 bits (100), Expect = 0.045, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 5/46 (10%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIET 59 R+ N+ + + N DI+CLQE ++ ++ + L+SL YH E Sbjct: 199 RLPNILKELADMNADILCLQEV--QENHYRTQIKPSLESLGYHCEY 242 >gi|26986873|ref|NP_742298.1| endonuclease/exonuclease/phosphatase [Pseudomonas putida KT2440] gi|148545402|ref|YP_001265504.1| endonuclease/exonuclease/phosphatase [Pseudomonas putida F1] gi|24981475|gb|AAN65762.1|AE016202_5 conserved hypothetical protein [Pseudomonas putida KT2440] gi|148509460|gb|ABQ76320.1| Endonuclease/exonuclease/phosphatase [Pseudomonas putida F1] Length = 284 Score = 43.2 bits (100), Expect = 0.045, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 14/60 (23%) Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 +F + +DHI+LS T L + +P SDH PV V + +P+ Sbjct: 228 TFPSWRPQ-------RCLDHILLSSSLT--LERVEVLAQP-----ISDHLPVAVEIRLPD 273 >gi|125531835|gb|EAY78400.1| hypothetical protein OsI_33487 [Oryza sativa Indica Group] Length = 450 Score = 43.2 bits (100), Expect = 0.045, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 7/43 (16%) Query: 2 SVVTVATWNVNSIR------ARIHNLAAWIKENNPDIICLQET 38 + T+NV IR R+ L I+ +NPD IC QE Sbjct: 141 KTFKIMTYNVW-IREDIELHRRLGALGDLIQLHNPDFICFQEV 182 >gi|294627673|ref|ZP_06706255.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294667101|ref|ZP_06732326.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292598025|gb|EFF42180.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292603111|gb|EFF46537.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 255 Score = 43.2 bits (100), Expect = 0.046, Method: Composition-based stats. Identities = 15/95 (15%), Positives = 30/95 (31%), Gaps = 14/95 (14%) Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 +A + + + R + +++F + D IDHI++S Sbjct: 170 HPNAMLMGDFNCMADRPEMQSLYRHTRLQPPSCDVHTFPSWRPD-------RAIDHILVS 222 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 I+ SDH V + + +P Sbjct: 223 DSLV-------IEHTEAIPAAFSDHLAVGMDIRVP 250 >gi|21241492|ref|NP_641074.1| hypothetical protein XAC0721 [Xanthomonas axonopodis pv. citri str. 306] gi|21106837|gb|AAM35610.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] Length = 245 Score = 43.2 bits (100), Expect = 0.046, Method: Composition-based stats. Identities = 15/95 (15%), Positives = 30/95 (31%), Gaps = 14/95 (14%) Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 +A + + + R + +++F + D IDHI++S Sbjct: 160 HPNAMLMGDFNCMADRPEMQSLYRHTRLQPPSCDVHTFPSWRPD-------RAIDHILVS 212 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 I+ SDH V + + +P Sbjct: 213 DSLV-------IEHTEAIPAAFSDHLAVGMDIRVP 240 >gi|331014877|gb|EGH94933.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 291 Score = 42.9 bits (99), Expect = 0.046, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 14/61 (22%) Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 +F + +DHI+LSP T L ++ P SDH PV V + +P Sbjct: 230 TFPSWRPQ-------RCLDHILLSPTLT--LERVQVLAHP-----ISDHLPVAVEIRLPA 275 Query: 266 P 266 Sbjct: 276 S 276 >gi|330965675|gb|EGH65935.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. actinidiae str. M302091] Length = 291 Score = 42.9 bits (99), Expect = 0.046, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 14/61 (22%) Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 +F + +DHI+LSP T L ++ P SDH PV V + +P Sbjct: 230 TFPSWRPQ-------RCLDHILLSPTLT--LERVQVLAHP-----ISDHLPVAVEIRLPA 275 Query: 266 P 266 Sbjct: 276 S 276 >gi|330874571|gb|EGH08720.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 291 Score = 42.9 bits (99), Expect = 0.046, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 14/61 (22%) Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 +F + +DHI+LSP T L ++ P SDH PV V + +P Sbjct: 230 TFPSWRPQ-------RCLDHILLSPTLT--LERVQVLAHP-----ISDHLPVAVEIRLPA 275 Query: 266 P 266 Sbjct: 276 S 276 >gi|330501089|ref|YP_004377958.1| endonuclease/exonuclease/phosphatase [Pseudomonas mendocina NK-01] gi|328915375|gb|AEB56206.1| endonuclease/exonuclease/phosphatase [Pseudomonas mendocina NK-01] Length = 290 Score = 42.9 bits (99), Expect = 0.046, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 14/62 (22%) Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 +F + +DHI+LS E L + ++P SDH PV V + +PE Sbjct: 229 TFPSWRPQ-------RCLDHILLSSELE--LGRVDVLSQP-----ISDHLPVAVEIRLPE 274 Query: 266 PR 267 + Sbjct: 275 AQ 276 >gi|28867571|ref|NP_790190.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213971019|ref|ZP_03399140.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. tomato T1] gi|301385582|ref|ZP_07234000.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. tomato Max13] gi|302058834|ref|ZP_07250375.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. tomato K40] gi|302132137|ref|ZP_07258127.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28850806|gb|AAO53885.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. tomato str. DC3000] gi|213924255|gb|EEB57829.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. tomato T1] Length = 291 Score = 42.9 bits (99), Expect = 0.046, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 14/61 (22%) Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 +F + +DHI+LSP T L ++ P SDH PV V + +P Sbjct: 230 TFPSWRPQ-------RCLDHILLSPTLT--LERVQVLAHP-----ISDHLPVAVEIRLPA 275 Query: 266 P 266 Sbjct: 276 S 276 >gi|77551044|gb|ABA93841.1| retrotransposon protein, putative, LINE subclass [Oryza sativa Japonica Group] Length = 362 Score = 42.9 bits (99), Expect = 0.046, Method: Composition-based stats. Identities = 25/214 (11%), Positives = 60/214 (28%), Gaps = 5/214 (2%) Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL-PHGN 117 K N VA+ + + FI + G+ Sbjct: 103 FYSLKFPNVVALSEDMRRAWRIRAEMSYKSLKDNLFIITFSMKGDYNFVLQGGPWLHRGD 162 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 +D S ++ + E N+ +N +W + Sbjct: 163 ASLIADFDGLTSPSMLAVKIKLKGREEFRRFNLRQSSNLPWMVTSDFNEALWHFEQFSRT 222 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 +S + L +D + W N +R+D + ++ Sbjct: 223 PRNESQMQAFRDVMQICELRDFGFKGLPHTYDNRREGW-NNVKVRLDRAIADDRWRDIVT 281 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271 +A++ + SDH P++++ + + + ++ Sbjct: 282 NAQVVHLV---SPCSDHCPILLNFHVKDDSRTRK 312 >gi|20502719|gb|AAM22579.1|AF390107_1 RgfB [Streptococcus agalactiae] Length = 271 Score = 42.9 bits (99), Expect = 0.047, Method: Composition-based stats. Identities = 42/283 (14%), Positives = 80/283 (28%), Gaps = 38/283 (13%) Query: 5 TVATWN------VNSIRARIHNLAAW---IKENNPDIICLQETKTEDKNFPFETLQSLNY 55 T N VN + L I DIICLQE S NY Sbjct: 3 KCLTLNTHSWMEVN----ALKKLFDLAEHIFREKYDIICLQEV--NQSISSPLAKSSPNY 56 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 H + L + +L G + ++ + + I +L Sbjct: 57 HPIEGTPALHQDNFAL----QLVHYLNLQGLHYHWTWAYNHIGYSKYHEGVAILSLKPLK 112 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 N I + DD+ + R A L + + + ++ Sbjct: 113 PNDILVSAVDDETDYHTRRALVAETTLNDKVVTVVS--LHLSWFEKGFAEEWKRLETTLL 170 Query: 176 TLEVRQSFQKLQNMGF---------------TDAIRATHDTHHLYSFWDYYADSWSKNKG 220 +E N D+ + + ++ K Sbjct: 171 EVETPLLLMGDFNNPTGNQGYELVLNSPLALKDSHQIANHVFGDHTIMADIDGWEGNKKA 230 Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +++DHI S + + S+++ + SDH + ++L++ Sbjct: 231 LKVDHIFTSEDL--SISSSQLVFEGGEAPVVSDHYGLEITLNL 271 >gi|74825508|sp|Q9NBX4|RTXE_DROME RecName: Full=Probable RNA-directed DNA polymerase from transposon X-element; AltName: Full=Reverse transcriptase gi|8925303|gb|AAF81411.1|AF237761_2 unknown [Drosophila melanogaster] Length = 908 Score = 42.9 bits (99), Expect = 0.047, Method: Composition-based stats. Identities = 31/268 (11%), Positives = 66/268 (24%), Gaps = 53/268 (19%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 M + + WN + + ++ + +++ + D++ L ET + P + T Sbjct: 1 MMPLRILVWNADGVSTKLPEVECFVRRHEIDVLLLSETHCKGAETPKL----FGFVAYTA 56 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 S + A + + + G Sbjct: 57 NDPSGGNAKGGAAILIK------NSLAHFPLTPIATAKVQLAPAVIETALGPISFGAVYC 110 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 ++ K ++ +N W A + + Sbjct: 111 PPRFAWTTDEFKD----------------ILEEFQTKFIVAGDWNASHWLWGAGRSNQRG 154 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR-----IDHIMLSPEATSL 235 + L D++ T + Y G R ID + Sbjct: 155 IALANLVLNSEVDSLATGGPTRYPY--------------GCRGSPGYIDFALTKGVL--- 197 Query: 236 LHSARIDTKPRG-WTKPSDHTPVIVSLD 262 I SDH P++++LD Sbjct: 198 ----GIHANISAVVELSSDHLPLVITLD 221 >gi|228473947|ref|ZP_04058688.1| endonuclease/exonuclease/phosphatase [Capnocytophaga gingivalis ATCC 33624] gi|228274461|gb|EEK13302.1| endonuclease/exonuclease/phosphatase [Capnocytophaga gingivalis ATCC 33624] Length = 343 Score = 42.9 bits (99), Expect = 0.047, Method: Composition-based stats. Identities = 48/274 (17%), Positives = 90/274 (32%), Gaps = 50/274 (18%) Query: 4 VTVATWNVNSIRARI-------------HNLAAWIKENNPDIICLQE--TKTEDKNFPFE 48 ++V ++NV R+ + ++KE +P I+ LQE K E ++FPF Sbjct: 102 LSVMSFNV-----RLFNHYKWSSDTLLREKILTFVKEEHPKILALQEFYYK-EKESFPF- 154 Query: 49 TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108 Y + K + I+ D + A +N TLR+ Sbjct: 155 ------YKYKKFIYKHKKDKIGQAILSDYPIINSGSLDFPHTGNNGVYADIVVNGDTLRL 208 Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168 +L+ + + D KR +R +++ + + + P+ Sbjct: 209 YSLHFESFHIEDT---DISQENSKRIFLKLPRRFAIQQAQVELFNAHADSCPYPIVVCGD 265 Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 + N A L + + L + Y + RID+I+ Sbjct: 266 FNNTAFSYLYQKFQDRGLVDSFEEAGSGFGRTYDFPY---------FP----FRIDYILA 312 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 P + S ++ T SDH P+ +L Sbjct: 313 DPYF--KITSHKVYT----GRDYSDHFPIRATLK 340 >gi|242760642|ref|XP_002340032.1| hypothetical protein TSTA_061350 [Talaromyces stipitatus ATCC 10500] gi|218723228|gb|EED22645.1| hypothetical protein TSTA_061350 [Talaromyces stipitatus ATCC 10500] Length = 244 Score = 42.9 bits (99), Expect = 0.047, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 18/56 (32%), Gaps = 3/56 (5%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278 ID + S + + S DTK W DH P+ D+ N Sbjct: 144 IDLVWASHNLANRVVSC--DTKLEWWYGA-DHVPISTQFDLTAIHVPPLVRKQWNA 196 >gi|197104868|ref|YP_002130245.1| hypothetical protein PHZ_c1402 [Phenylobacterium zucineum HLK1] gi|196478288|gb|ACG77816.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1] Length = 324 Score = 42.9 bits (99), Expect = 0.048, Method: Composition-based stats. Identities = 35/264 (13%), Positives = 69/264 (26%), Gaps = 45/264 (17%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V N+ S + + W+ +PD++ ++ET + +H+ Sbjct: 106 LKVVQINLWSRNGSLDDTLNWVLAQDPDVVVMEET---SPPLREKVRGLAGWHV------ 156 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 + I++ P + + R + Sbjct: 157 -------SCATCEVMILSRRPPIRSEAVRLRGPNPGPLTRAVFRDRRGRYAVIGVHYAWP 209 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 D + + + E I AGD+N P + Sbjct: 210 TDMEDHQAQEAGLAEVIAMGPRERTIVAGDFNSAPWSFSRRRWDAEFGLIRRDRALLTWP 269 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 ++ + A IDH+ + + ++ Sbjct: 270 ALQYKRLRWLG------------WFPFLA----------IDHVYAGSDWA----TVSVER 303 Query: 244 KPRGWTKPSDHTPVIVSLDIPEPR 267 PR SDH PV++SL PR Sbjct: 304 GPRLG---SDHYPVVMSLAPAAPR 324 >gi|22538094|ref|NP_688945.1| hypothetical protein SAG1958 [Streptococcus agalactiae 2603V/R] gi|76797931|ref|ZP_00780192.1| RgfB [Streptococcus agalactiae 18RS21] gi|22535000|gb|AAN00818.1|AE014280_10 conserved hypothetical protein [Streptococcus agalactiae 2603V/R] gi|76586705|gb|EAO63202.1| RgfB [Streptococcus agalactiae 18RS21] Length = 276 Score = 42.9 bits (99), Expect = 0.048, Method: Composition-based stats. Identities = 42/285 (14%), Positives = 79/285 (27%), Gaps = 38/285 (13%) Query: 2 SVVTVATWN------VNSIRARIHNLAAW---IKENNPDIICLQETKTEDKNFPFETLQS 52 S+ T N VN + L I DIICLQE S Sbjct: 5 SMAKCLTLNTHSWMEVN----ALKKLFDLAEHIFREKYDIICLQEV--NQSISSPLAKSS 58 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 NYH + L + +L G + ++ + + I +L Sbjct: 59 PNYHPIEGTPALHQDNFAL----QLVHYLNLQGLHYHWTWAYNHIGYSKYHEGVAILSLK 114 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 I + DD+ + R A L + + + + Sbjct: 115 PLKPEDILVSAVDDETDYHTRRALVAETTLNDKVVTVVS--LHFSWFEKGFAEEWKRLET 172 Query: 173 ACFTLEVRQSFQKLQNMGF---------------TDAIRATHDTHHLYSFWDYYADSWSK 217 +E N D+ + + ++ Sbjct: 173 TLLEVETPLLLMGDFNNPTGNQGYELVLNSPLALKDSHQIANHVFGDHTIMADIDGWEGN 232 Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 K +++DHI S + + S+++ + SDH + +++D Sbjct: 233 KKALKVDHIFTSEDL--SISSSQVVFEGGEAPVVSDHYGLEITMD 275 >gi|47214396|emb|CAG00877.1| unnamed protein product [Tetraodon nigroviridis] Length = 256 Score = 42.9 bits (99), Expect = 0.048, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 23/42 (54%), Gaps = 9/42 (21%) Query: 4 VTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQET 38 +++ +WN++ + RAR L++ + + D++ LQE Sbjct: 7 LSLISWNIDGLDGEKQPERAR--GLSSSLTSESADVVFLQEL 46 >gi|153005502|ref|YP_001379827.1| endonuclease/exonuclease/phosphatase [Anaeromyxobacter sp. Fw109-5] gi|152029075|gb|ABS26843.1| Endonuclease/exonuclease/phosphatase [Anaeromyxobacter sp. Fw109-5] Length = 289 Score = 42.9 bits (99), Expect = 0.049, Method: Composition-based stats. Identities = 11/68 (16%), Positives = 27/68 (39%), Gaps = 7/68 (10%) Query: 197 ATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTP 256 + W + + R+D +++ + + + A ++ + SDH P Sbjct: 229 HVDPLPSWETTWSSGSPAE------RLDALLVGRASAAAIVRAVVERG-TDVARASDHQP 281 Query: 257 VIVSLDIP 264 V++ L +P Sbjct: 282 VVLDLRLP 289 Score = 41.7 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 25/59 (42%), Gaps = 22/59 (37%) Query: 2 SVVTVATWNVN------------S----------IRARIHNLAAWIKENNPDIICLQET 38 +V+ VATWNV+ ++A++ +A + + D++ LQE Sbjct: 33 TVLRVATWNVHDLFDAEDRLLPPGAEDALPSPEAVKAKLDAVAEVLLRVDADVVLLQEV 91 >gi|52785878|ref|YP_091707.1| hypothetical protein BLi02127 [Bacillus licheniformis ATCC 14580] gi|52348380|gb|AAU41014.1| conserved hypothetical protein [Bacillus licheniformis ATCC 14580] Length = 243 Score = 42.9 bits (99), Expect = 0.049, Method: Composition-based stats. Identities = 40/262 (15%), Positives = 78/262 (29%), Gaps = 33/262 (12%) Query: 3 VVT--VATWNVNSIRARIHNL-----AAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55 ++ + T+N++ + R + A I ++ DII L E D++F Sbjct: 2 IMKFSIMTFNIHHGKGRDRRVDLGRTAGVIAQSGCDIIGLNEV---DRHFSN-------- 50 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + Q + Y ++ GD + + + R + Sbjct: 51 RSDYEDQIGRLAEQLNMHYAYCPSLSLSSGDSSEKRQYGNALLTRFPIKKERHHSFNFVK 110 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 G + + + R R L L L +I + + P+I D Sbjct: 111 GLIEGRSLLEADVRIGDRLFRVFVTHLSLNPWLHGKQTDFLIEKVQESDLPVIVTGDFNM 170 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 R + + + ++ + R+D+I LSP Sbjct: 171 KPYSRGWKKVAEKLADLWDESQY---GQGFTHPSHRPR-------RRLDYIFLSPSF--H 218 Query: 236 LHSARIDTKPRGWTKPSDHTPV 257 + +A I SDH P+ Sbjct: 219 VSAAEI---VAVDPNASDHLPL 237 >gi|156541496|ref|XP_001601120.1| PREDICTED: similar to secreted protein [Nasonia vitripennis] Length = 1163 Score = 42.9 bits (99), Expect = 0.049, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 4/54 (7%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKN--FPFETLQSL 53 S VT+ +WNV +R + N++ +I DII L ET ++ + FP + Sbjct: 209 SEVTIISWNVRGVRDKWSNISQYINSY--DIIFLCETFLDENDYSFPARGFNEI 260 >gi|149376400|ref|ZP_01894162.1| Metal-dependent hydrolase [Marinobacter algicola DG893] gi|149359241|gb|EDM47703.1| Metal-dependent hydrolase [Marinobacter algicola DG893] Length = 286 Score = 42.9 bits (99), Expect = 0.049, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 23/48 (47%), Gaps = 11/48 (22%) Query: 221 IR----IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 R +DHI++SP + + + + P SDH P+ + + +P Sbjct: 239 WRPERALDHILVSPSLE--IRRSEVVSYP-----VSDHLPIAMDIKLP 279 >gi|115747640|ref|XP_001189235.1| PREDICTED: similar to endonuclease/reverse transcriptase [Strongylocentrotus purpuratus] gi|115918140|ref|XP_785273.2| PREDICTED: similar to endonuclease/reverse transcriptase [Strongylocentrotus purpuratus] Length = 942 Score = 42.9 bits (99), Expect = 0.050, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 36/97 (37%), Gaps = 3/97 (3%) Query: 4 VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + + N ++++ L I++ +PDIIC E+ E + E NY I Sbjct: 29 LKLLSINCRGLKSKKKQRDLLGAIQQEDPDIICGCESHLEGSYYTSEIF-PRNYDIYRKD 87 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT 98 + + G + + + I + G T Sbjct: 88 RDRHGGGVLQTDCESIWVKIFFAGKQPLYVGSIYRPT 124 >gi|260433467|ref|ZP_05787438.1| endonuclease/exonuclease/phosphatase family protein [Silicibacter lacuscaerulensis ITI-1157] gi|260417295|gb|EEX10554.1| endonuclease/exonuclease/phosphatase family protein [Silicibacter lacuscaerulensis ITI-1157] Length = 234 Score = 42.9 bits (99), Expect = 0.050, Method: Composition-based stats. Identities = 33/268 (12%), Positives = 66/268 (24%), Gaps = 44/268 (16%) Query: 1 MSVVTVATWNVN---SI--RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55 + + +A++N+ + R + + + DI+ LQE DK P Sbjct: 4 LPKLRLASYNIQKCVGLDLRRQPQRILQVLDRLGADIVVLQE---ADKRLP--------- 51 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + + +L + + G I I + +L Sbjct: 52 -----PRPAALPHFMLDEAGWKIVDLGGAGSLGWHGNAVIWRGDHIRVRRAAHHDLPGLE 106 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 ++D I ++ I + N+ Sbjct: 107 PRGAVRVEFDTHIGPLRVMGMHLGLFSAWRRQQILHLRRDGRALDRMPTVWAGDFNEWSR 166 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 + + ++ + + A +D I L +L Sbjct: 167 QPILDRLAPDMRFLPPVPSFPAAQPLGA-------------------LDRIALGGGLEAL 207 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263 H R SDH PV L + Sbjct: 208 AHGV---HGERPAHIASDHLPVWADLRL 232 >gi|260797709|ref|XP_002593844.1| hypothetical protein BRAFLDRAFT_75696 [Branchiostoma floridae] gi|229279074|gb|EEN49855.1| hypothetical protein BRAFLDRAFT_75696 [Branchiostoma floridae] Length = 403 Score = 42.9 bits (99), Expect = 0.050, Method: Composition-based stats. Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 5/39 (12%) Query: 5 TVATWNVNSI--RA---RIHNLAAWIKENNPDIICLQET 38 T+ TWN+N + R R + I PD++ LQE Sbjct: 126 TLLTWNINGLDQRNILERTKAVCNTINSLYPDVVFLQEV 164 >gi|147798168|emb|CAN60702.1| hypothetical protein VITISV_015869 [Vitis vinifera] Length = 3028 Score = 42.9 bits (99), Expect = 0.050, Method: Composition-based stats. Identities = 23/167 (13%), Positives = 55/167 (32%), Gaps = 7/167 (4%) Query: 94 FIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGD 153 + + + +G + ++ S + + L EE G Sbjct: 1965 VFWDKRVLELEGMEVGLFSVSCRFKNCEDGFNWVFSGVYGPTVKRYRELFWEELGAIRGL 2024 Query: 154 YNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD 213 ++ +N I + N++ + S ++ + +R +++ + Sbjct: 2025 WSDPWCIGGDFNLIRFPNESRRGGRLSSSMRRFSEVIDDLDLRDLPLQGGPFTW----SG 2080 Query: 214 SWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 + R+D ++S + S A T PR SDH P+++ Sbjct: 2081 GLNNQAMTRLDRFLVSEDWESHFKGAVQCTLPR---PVSDHFPILLD 2124 >gi|21243041|ref|NP_642623.1| hypothetical protein XAC2306 [Xanthomonas axonopodis pv. citri str. 306] gi|21108551|gb|AAM37159.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] Length = 278 Score = 42.9 bits (99), Expect = 0.050, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 7/63 (11%) Query: 4 VTVATWNVNSIR----ARIHNLAAWIKENNPDIICLQET---KTEDKNFPFETLQSLNYH 56 +T+ T N++ R AR ++A +K PD+I LQE + +N + L Y Sbjct: 23 MTLVTLNLHHDREDWPARRAHIAKELKRLAPDVIALQEVIERRGSVENQAAWLARKLGYD 82 Query: 57 IET 59 Sbjct: 83 YIF 85 >gi|163734486|ref|ZP_02141926.1| hypothetical protein RLO149_09579 [Roseobacter litoralis Och 149] gi|161392494|gb|EDQ16823.1| hypothetical protein RLO149_09579 [Roseobacter litoralis Och 149] Length = 280 Score = 42.9 bits (99), Expect = 0.051, Method: Composition-based stats. Identities = 35/270 (12%), Positives = 74/270 (27%), Gaps = 35/270 (12%) Query: 4 VTVATWNV---NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPF--ETLQSLNYHIE 58 + V +WNV N ARI A + NPDI QE P +++ ++ Sbjct: 36 LRVLSWNVFNENPDAARI---ADALTALNPDIALFQEV------LPAHIAVIKASFPYVS 86 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + G ++ + + + + Sbjct: 87 VARDYALKGELCHLVIASRFPTRRETILFHSDTSKPAPTRWARHAGWVEFLDSLSVDVVV 146 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ--PHDCYNPIIWENDACFT 176 + + + ++++ EL E + Y Sbjct: 147 PGARPFRVVNLHTSAGVSPSARQAELAETQSHFDCEGPCLVAGDFNSYAVPWLAPLLAIP 206 Query: 177 LEVRQSFQKLQNMGFTDAIRATH---DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 L R + ++ H +F + D + + + T Sbjct: 207 LHYRPKDWLIFERRALNSWFQRQGFAPAVHGVTFPKFRLQM---------D-QLFTRDIT 256 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + +A I+ R W SDH P+ + +++ Sbjct: 257 --VETAVIER--RLW--GSDHRPLSLEINL 280 >gi|297161245|gb|ADI10957.1| hypothetical protein SBI_07837 [Streptomyces bingchenggensis BCW-1] Length = 271 Score = 42.9 bits (99), Expect = 0.051, Method: Composition-based stats. Identities = 31/285 (10%), Positives = 67/285 (23%), Gaps = 42/285 (14%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 +VV V ++N+ S+R L ++ PD++C+QE Sbjct: 16 AVVRVLSYNIRSMRDDREALVRVVRACAPDVLCVQE---------------------APR 54 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 + A + + T T+ + + ++ H + + Sbjct: 55 FFRWRKAASWLARETGLVHTTGGATATGPMLLTSLRAHVERTEDILLPHVPGLHRRGLAT 114 Query: 122 TKYDDKISWIKRFLRFASQRLEL----EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 E + + D Sbjct: 115 AVLRFGGGHRGDNGIRLGVVSCHLSLAEAERYDQAGMVLDQLARLDVPYTVLAGDINDPP 174 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 E R + + A ++ + ID + + + Sbjct: 175 EGRAFRRLAGPLRDAWATEPW---GSELTYPP--GQPRER-----IDALFATEGVE--IL 222 Query: 238 SARIDTKPRG-----WTKPSDHTPVIVSLDIPEPRKKQQDSTSQN 277 + G SDH PV+ +L +P ++ Sbjct: 223 GCGVPAGLPGVTEADLRAASDHLPVLAALRLPRVSSAVPAGSTGK 267 >gi|149277549|ref|ZP_01883690.1| hypothetical protein PBAL39_05158 [Pedobacter sp. BAL39] gi|149231782|gb|EDM37160.1| hypothetical protein PBAL39_05158 [Pedobacter sp. BAL39] Length = 278 Score = 42.9 bits (99), Expect = 0.051, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 3/53 (5%) Query: 212 ADSWSKNKGIR-IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 ++ + KG+ IDHI +S + T I T PSDH PV+ + + Sbjct: 228 SNGFKIPKGMGVIDHIFMSKQFT--AQKWGILTDTYFGKYPSDHFPVLAVVAL 278 >gi|254475984|ref|ZP_05089370.1| endonuclease/exonuclease/phosphatase family protein [Ruegeria sp. R11] gi|214030227|gb|EEB71062.1| endonuclease/exonuclease/phosphatase family protein [Ruegeria sp. R11] Length = 271 Score = 42.9 bits (99), Expect = 0.052, Method: Composition-based stats. Identities = 41/275 (14%), Positives = 79/275 (28%), Gaps = 25/275 (9%) Query: 3 VVTVATWNVN---SIRARIHNLAAWIKEN--NPDIICLQET-----KTED-KNFPFETLQ 51 ++ +AT+N+ + +I I + DI+ LQE ++ED T + Sbjct: 1 MIKLATYNIQYCMGLDEKID--PDRIADAVGGADILALQEVDRFWERSEDQDQVEELTRR 58 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 + H + + + + I++ P + + + Sbjct: 59 LPHVHHVFAPGIDVHHPRLGRRQHGLMILSRWPILSHRTMPLPMRPHPDLFVGQSLLQ-- 116 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 P + + A Q + A + + + Sbjct: 117 EAVIATPEGVLRLYNTHFNYGDEALIAEQAAFSAAVMRQALQAGGVWGGGNVERDKSNGD 176 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI-----RIDHI 226 DA E L +DA R + + + S R+DH+ Sbjct: 177 DAPPMPETTVLVGDLNVGPTSDAYRILMRSGLVDPWVS-LGQSEEGVTSSHLDDKRLDHV 235 Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + + + S IDT G SDH PV + Sbjct: 236 LCTEDCISDDAQMWIDTTAVG----SDHMPVWLQF 266 >gi|329928380|ref|ZP_08282250.1| 5'-nucleotidase, C-terminal domain protein [Paenibacillus sp. HGF5] gi|328937816|gb|EGG34222.1| 5'-nucleotidase, C-terminal domain protein [Paenibacillus sp. HGF5] Length = 2084 Score = 42.9 bits (99), Expect = 0.052, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 29/72 (40%), Gaps = 16/72 (22%) Query: 200 DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP------SD 253 Y++ Y +S +DHI++S T S ++D P SD Sbjct: 1075 PLKEQYTY-TYDGNSQV------LDHILVSKNLT---RSTQVDIVHLNADFPASKGRVSD 1124 Query: 254 HTPVIVSLDIPE 265 H PV+ +D+ E Sbjct: 1125 HDPVVAQIDLKE 1136 >gi|70942558|ref|XP_741431.1| exodeoxyribonuclease III [Plasmodium chabaudi chabaudi] gi|56519806|emb|CAH79414.1| exodeoxyribonuclease III, putative [Plasmodium chabaudi chabaudi] Length = 652 Score = 42.9 bits (99), Expect = 0.052, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 28/69 (40%), Gaps = 11/69 (15%) Query: 198 THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL-LHSARIDTKPRGWTKPSDHTP 256 D + ++ WD Y + N+G RID+I + + + +P Sbjct: 409 YPDMNGKFTCWDMYKQNRITNEGSRIDYIFVDSILFEMFIKKYNHLYD----------SP 458 Query: 257 VIVSLDIPE 265 +I++ D+ E Sbjct: 459 IILTKDLEE 467 >gi|281342084|gb|EFB17668.1| hypothetical protein PANDA_018675 [Ailuropoda melanoleuca] Length = 115 Score = 42.9 bits (99), Expect = 0.053, Method: Composition-based stats. Identities = 22/94 (23%), Positives = 36/94 (38%), Gaps = 12/94 (12%) Query: 188 NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRG 247 M TD RA H +F+ ++S RIDHI+ A + I Sbjct: 30 QMDLTDIFRAFHPKAAECTFFSRAHGTFS-----RIDHILGHKSALNKYRKIEIIPFI-- 82 Query: 248 WTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 SDH + LD+ + +K + ++ + I Sbjct: 83 ---FSDHNA--MKLDVNQKKKFGKTTSRWRLMNI 111 >gi|219111411|ref|XP_002177457.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217411992|gb|EEC51920.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 409 Score = 42.9 bits (99), Expect = 0.053, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 35/120 (29%), Gaps = 10/120 (8%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC----- 60 V++WN R L I + DI+CLQE + F+ ++ L Y + Sbjct: 57 VSSWN-----FRKDLLRERIATVDADIVCLQEVSPVSFDTDFDFMRELGYDGKEMFKKGR 111 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + + + + + T I N +L G Sbjct: 112 FRPATFWKTSRCEIVTPPVHKDRTLLTAFRVLPPPTVSDPAETHVWYILNCHLQAGKEGG 171 >gi|145349696|ref|XP_001419264.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144579495|gb|ABO97557.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 249 Score = 42.9 bits (99), Expect = 0.053, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 9/60 (15%) Query: 204 LYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 Y++ + + +D+I+ S + SA I + SDH P++ +LDI Sbjct: 159 RYTWQSGSSKAK-------LDYILTSRADIE-VVSAAI-RHDLVTSSVSDHFPLVATLDI 209 >gi|322411016|gb|EFY01924.1| hypothetical protein SDD27957_01170 [Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957] Length = 277 Score = 42.9 bits (99), Expect = 0.054, Method: Composition-based stats. Identities = 34/276 (12%), Positives = 82/276 (29%), Gaps = 20/276 (7%) Query: 3 VVTVATWNVNSI--RARIHNLAAW---IKENNPDIICLQETKTEDKNFPFETLQSLNYH- 56 + + T N +S + L I DIICLQE ++ E L + Sbjct: 1 MTKLLTLNTHSWMEANALKKLVDLAEHILAEKYDIICLQEI---NQLIESELAMELPSYQ 57 Query: 57 ----IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 + + + I + + + + E ++ Q + + ++ Sbjct: 58 PIVGTPAIHKDHFALLLIHYLKKRGQHYYWSWAYNHIGYDIYHEGVAILSKQPIHVSDIL 117 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLI---FAGDYNIIPQP--HDCYNPI 167 + + T + + + + F G++ + + I Sbjct: 118 VSAMDDETDYHTRRSLVAKTKLDGKEVAIVNVHLSWFDKGFLGEWERLEKELLSLNCPLI 177 Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227 + + T + + D+ + +S + ++DH+ Sbjct: 178 LMGDFNNPTDQDGYQVIMGSPLDLQDSHKIADHIFGDHSIVADIDGWEDNKEAFKVDHVF 237 Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 S + + ++ I + SDH + V+LD Sbjct: 238 TSKDFE--IKASHITFEGGDAPVVSDHYGLEVTLDW 271 >gi|323340316|ref|ZP_08080576.1| endonuclease/exonuclease/phosphatase family protein [Lactobacillus ruminis ATCC 25644] gi|323092265|gb|EFZ34877.1| endonuclease/exonuclease/phosphatase family protein [Lactobacillus ruminis ATCC 25644] Length = 285 Score = 42.9 bits (99), Expect = 0.054, Method: Composition-based stats. Identities = 30/279 (10%), Positives = 71/279 (25%), Gaps = 26/279 (9%) Query: 4 VTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFP----FETLQSLN 54 + + T N +S+ +I + I D++ LQE F + L+SL Sbjct: 1 MRMLTLNCHSLLDYDSDKQIQEIVDQIVREEIDVLSLQE--ANQSQFESAIAEDELESLG 58 Query: 55 Y-HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 Y + ++ V + R+ + Sbjct: 59 YKEPAEGNAIIKKDNFAYRLSRALKKVKLDFKWSWNSSYGEANGLEWGVALFSRLCLTNV 118 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 +S + + + + + + F G+ + + Sbjct: 119 HSTLISSSDFAGNLTKRCVLLAQLSDEMKTVVAAVHFNGENSSEFRHEWSNLMETIAGLG 178 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADS-----WSKNKGI------- 221 + + ++ + K G Sbjct: 179 LSNRPLYLLGNFNVDAEVDTGSYTLMCQEFEDTYCSAISKGDGMTVRGKLDGWDDSGISE 238 Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 R+D+I+ A + + +RI + S+H V++ Sbjct: 239 RLDYILT--NAQNEVSYSRICFDGNIGPRISNHAGVLIE 275 >gi|149175989|ref|ZP_01854606.1| deoxyribonuclease gamma (precursor) [Planctomyces maris DSM 8797] gi|148845143|gb|EDL59489.1| deoxyribonuclease gamma (precursor) [Planctomyces maris DSM 8797] Length = 343 Score = 42.9 bits (99), Expect = 0.054, Method: Composition-based stats. Identities = 32/283 (11%), Positives = 82/283 (28%), Gaps = 28/283 (9%) Query: 3 VVTVATWNV----NSIRARIHNLAAWIKE--NNPDIICLQETKTEDKNFPFETLQSLN-- 54 + +AT+N+ +S + + + + D++ +QE + D++F E L+ LN Sbjct: 76 TIRIATFNIQVFGHS-KMQKPEVPQILARIIQQFDVVAVQEIRALDQSFLDEFLKILNAG 134 Query: 55 -YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 A +Y + ++ + + Sbjct: 135 EQQYGCLVGPRQGRTASKEQYAYFYNTARITVNEKWTYTVIDKYDKLHRPPYVAHFRTLS 194 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 P + + I+ + L++ + + ++ Sbjct: 195 PSSSNPFTFSL---INIHTDPDETDQELNVLDDVYRVVANDGSQEDDVILLGDLNVDDQH 251 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 L + T+ ++ + L+S + ++ G+ + + Sbjct: 252 LGELGQVSDIMWTVSKTPTNTRKSKQYDNILFS--RRRSQEFTGKSGV---Y-----DFR 301 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQ 276 + + + SDH P+ I E +Q S +Q Sbjct: 302 TRFKLSE--KEAL---TVSDHLPIWAEFHISENGAVRQASAAQ 339 >gi|83949536|ref|ZP_00958269.1| endonuclease/exonuclease/phosphatase family protein [Roseovarius nubinhibens ISM] gi|83837435|gb|EAP76731.1| endonuclease/exonuclease/phosphatase family protein [Roseovarius nubinhibens ISM] Length = 340 Score = 42.9 bits (99), Expect = 0.054, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 21/53 (39%), Gaps = 12/53 (22%) Query: 223 IDHIMLSPEATSLLHSARI-----DTKP-------RGWTKPSDHTPVIVSLDI 263 +D+IM++ + RI D R SDH PV + LDI Sbjct: 288 LDYIMVTRGLRERGAAWRIWHPFDDPDCWNLPELSRALLTASDHYPVTIDLDI 340 >gi|260172525|ref|ZP_05758937.1| hypothetical protein BacD2_11731 [Bacteroides sp. D2] gi|315920818|ref|ZP_07917058.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313694693|gb|EFS31528.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 299 Score = 42.9 bits (99), Expect = 0.054, Method: Composition-based stats. Identities = 30/242 (12%), Positives = 60/242 (24%), Gaps = 15/242 (6%) Query: 23 AWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTH 82 I ++ DI + E ++ L+ Y G Y+ + Sbjct: 72 EIITSHDFDIFGVNEC-LLNQLNDLLELKQYEYIGTGRDDGKEAGEFCPILYKKERVELL 130 Query: 83 LPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRL 142 G + + + RI K D + S Sbjct: 131 YHGQFWYSETPDKPSKSWNSFCN-RICTW-----GKFKDKKTDKDFFFFSSHFDHVSNEA 184 Query: 143 ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH 202 + + I + D L ++ + Sbjct: 185 RVNSAKLLVQKVQEIAGDLPYFCTGDLNCDPDEEPISFILNSGLFKDSYSISETTPKGPA 244 Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSL 261 +W+ + N RID+I++ + S I R SDH P+++ Sbjct: 245 GTLHYWN-----FDFNPEHRIDYILVEKSI--KVLSFETITDDARQGRFSSDHYPIMIKA 297 Query: 262 DI 263 ++ Sbjct: 298 EL 299 >gi|237797954|ref|ZP_04586415.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. oryzae str. 1_6] gi|331020805|gb|EGI00862.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. oryzae str. 1_6] Length = 291 Score = 42.9 bits (99), Expect = 0.054, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 14/61 (22%) Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 +F + +DHI+LSP T L ++ +P SDH PV V + +P Sbjct: 230 TFPSWRPQ-------RCLDHILLSPTLT--LERVQVLAQP-----ISDHLPVAVEIRLPA 275 Query: 266 P 266 Sbjct: 276 S 276 >gi|187928145|ref|YP_001898632.1| endonuclease/exonuclease/phosphatase [Ralstonia pickettii 12J] gi|187725035|gb|ACD26200.1| Endonuclease/exonuclease/phosphatase [Ralstonia pickettii 12J] Length = 287 Score = 42.9 bits (99), Expect = 0.055, Method: Composition-based stats. Identities = 45/289 (15%), Positives = 87/289 (30%), Gaps = 42/289 (14%) Query: 6 VATWNVN---------SIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFP--------F 47 + TWN+ S+ AR + + D++CLQE + + P Sbjct: 5 ILTWNIQWGRGADGHVSL-ARQLKQGREMAE---FDVLCLQEVTSGFSDLPGQPGADQWS 60 Query: 48 ETLQSLNYHI--------------ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR 93 E ++L + + Y + P + Sbjct: 61 ELAEALGSEYTVIGGFALERHNGAHVQRFGNAIATRLPVHYIQRHALPCPPDATPCMPRM 120 Query: 94 FIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGD 153 IEA LRI +L + + + D + I + + AG Sbjct: 121 AIEAVVQAPFGVLRIVTTHLEYYSELQRVAQIDALRAIHTEGCARANQPATLGAEPEAGP 180 Query: 154 YNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYA 212 + + Q + A + + + DA H T +F Y Sbjct: 181 FRPLAQTKATIICGDFNCKADSMPKRLATAPFAREPALHDAWEIAHGATPQPPTFGVYDR 240 Query: 213 DSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 W++ D +++S + I++ T+ SDH P++++L Sbjct: 241 ADWTEPAYA-CDFMLISEPLKPRVLRLEINSA----TQASDHQPMLLAL 284 >gi|77412876|ref|ZP_00789080.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus agalactiae 515] gi|77161016|gb|EAO72123.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus agalactiae 515] Length = 276 Score = 42.9 bits (99), Expect = 0.055, Method: Composition-based stats. Identities = 42/285 (14%), Positives = 80/285 (28%), Gaps = 38/285 (13%) Query: 2 SVVTVATWN------VNSIRARIHNLAAW---IKENNPDIICLQETKTEDKNFPFETLQS 52 S+ T N VN + L I DIICLQE S Sbjct: 5 SMAKCLTLNTHSWMEVN----ALKKLFDLAEHIFREKYDIICLQEV--NQSISSPLAKSS 58 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 NYH + L + +L G + ++ + + I +L Sbjct: 59 PNYHPIEGTPALHQDNFAL----QLVHYLNLQGLHYHWTWAYNHIGYSKYHEGVAILSLK 114 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 I + DD+ + R A L + + + ++ Sbjct: 115 PLKPEDILVSAVDDETDYHTRRALVAETTLNDKVVTVVS--LHLSWFEKGFAEEWKRLET 172 Query: 173 ACFTLEVRQSFQKLQNMGF---------------TDAIRATHDTHHLYSFWDYYADSWSK 217 +E N D+ + + ++ Sbjct: 173 TLLEVETPLLLMGDFNNPTGNQGYELVLNSPLALKDSHQIANHVFGDHTIMADIDGWEGN 232 Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 K +++DHI S + + S+++ + SDH + +++D Sbjct: 233 KKALKVDHIFTSEDL--SISSSQVVFEGGEAPVVSDHYGLEITMD 275 >gi|166363682|ref|YP_001655955.1| hypothetical protein MAE_09410 [Microcystis aeruginosa NIES-843] gi|166086055|dbj|BAG00763.1| unknown protein [Microcystis aeruginosa NIES-843] Length = 313 Score = 42.9 bits (99), Expect = 0.056, Method: Composition-based stats. Identities = 37/267 (13%), Positives = 75/267 (28%), Gaps = 48/267 (17%) Query: 4 VTVATWNVN------SIRARIHNLAAWIKENNPDIICLQE-TKTEDKNFPFETLQSLNYH 56 +TV T+NVN S + ++ N D+ L E K + Y+ Sbjct: 87 LTVMTYNVNYQLWETS------AVTDLVRANPVDVFGLVEPFKEQAAELLDNVQDLYPYY 140 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 + + G+++ S+Y E T G + F T + + + + P Sbjct: 141 Y----RATGGGLSLFSRYPITEATTDNLGTRHH--SLFASVNVTGHPIRVVVAHPLAPIS 194 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 P + ++ + + + + + + + + + Sbjct: 195 MPNFINRNQAMVALAAYAAQQSITTVIMGDFNLTSWSIYFRNFIINSGLRSVNLGHGLNP 254 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 + + IDHI +S Sbjct: 255 TWFYTDEARSLSHLDHWKQALKIP----------------------IDHIFVS------- 285 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263 + R+D + SDH PVI L + Sbjct: 286 QNVRVDQVITLPSGVSDHRPVIAKLRV 312 >gi|84496163|ref|ZP_00995017.1| hypothetical protein JNB_01550 [Janibacter sp. HTCC2649] gi|84382931|gb|EAP98812.1| hypothetical protein JNB_01550 [Janibacter sp. HTCC2649] Length = 225 Score = 42.9 bits (99), Expect = 0.057, Method: Composition-based stats. Identities = 9/45 (20%), Positives = 20/45 (44%), Gaps = 14/45 (31%) Query: 1 MSVVTVATWNVNSIRARIHNLAA-------WIKENNPDIICLQET 38 M+ + +A++N + ++ +PD++CLQE Sbjct: 1 MTTIRIASYN-------TRDFLEDPYAAARVVRAIDPDVLCLQEV 38 >gi|114320344|ref|YP_742027.1| endonuclease/exonuclease/phosphatase [Alkalilimnicola ehrlichii MLHE-1] gi|114226738|gb|ABI56537.1| Endonuclease/exonuclease/phosphatase [Alkalilimnicola ehrlichii MLHE-1] Length = 575 Score = 42.9 bits (99), Expect = 0.057, Method: Composition-based stats. Identities = 15/83 (18%), Positives = 25/83 (30%), Gaps = 26/83 (31%) Query: 198 THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR-----------IDTKPR 246 Y++ + G +DH + P + +A ++ R Sbjct: 498 HLPPERRYTY------VFRGESGY-LDHALAPPRLADRVQAAGTWAINADEPRLLEYDAR 550 Query: 247 GWTK--------PSDHTPVIVSL 261 G + SDH PV V L Sbjct: 551 GIERRFRPGPWRSSDHDPVWVDL 573 >gi|156374238|ref|XP_001629715.1| predicted protein [Nematostella vectensis] gi|156216721|gb|EDO37652.1| predicted protein [Nematostella vectensis] Length = 304 Score = 42.9 bits (99), Expect = 0.057, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 32/79 (40%), Gaps = 14/79 (17%) Query: 186 LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN--KGIRIDHIMLSPEATSLLHSARIDT 243 +Q D R + Y++ K R+D ++S ++ SA+I T Sbjct: 184 MQENDLIDIWRVRNPDSKRYTW-------RQKKQLVQRRLDFWLISNFLQDVIESAKIKT 236 Query: 244 KPRGWTKPSDHTPVIVSLD 262 + DH+ +++S+D Sbjct: 237 AIQT-----DHSAILLSID 250 >gi|194365350|ref|YP_002027960.1| endonuclease/exonuclease/phosphatase [Stenotrophomonas maltophilia R551-3] gi|194348154|gb|ACF51277.1| Endonuclease/exonuclease/phosphatase [Stenotrophomonas maltophilia R551-3] Length = 284 Score = 42.9 bits (99), Expect = 0.057, Method: Composition-based stats. Identities = 34/275 (12%), Positives = 74/275 (26%), Gaps = 34/275 (12%) Query: 4 VTVATWNVNSIRA------------RIHNLAAWIKENNPDIICLQE-TKTEDKNFPFETL 50 + V ++NV R R + I + +P +I QE K + E L Sbjct: 30 LKVMSFNV---RTPADTEPGKRWPDRRDAMVKVILDAHPAVIGTQELVKEQADYL-SEHL 85 Query: 51 QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 + E S + + + + L + N + Sbjct: 86 PGYRWFGEGRRGGSGDEHMGVFYDSKVLTIEESGNFWLSDTPDVPGSISWGNLYPRMVTW 145 Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170 + + R + ++ + +P + Sbjct: 146 AVFRRLDDDRRFYF----MDTHLPYRDEDEPRRVKGAELIGKRLASLPADLPVVLTGDFN 201 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230 + +++ + + +F D+ + S+ +D +++ Sbjct: 202 -----SEPGGDTYKAFSRVLQDTRPQVKAPQGPRLTFHDFTGKATSQ-----LDWVLVRG 251 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 S D + PSDH P++V LD P Sbjct: 252 F---HARSFLTDDRRIDGVLPSDHFPLVVELDWPA 283 >gi|109390622|emb|CAJ13338.1| pol protein [Drosophila melanogaster] Length = 1103 Score = 42.9 bits (99), Expect = 0.057, Method: Composition-based stats. Identities = 39/274 (14%), Positives = 75/274 (27%), Gaps = 31/274 (11%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + + WN I + + L A+IK+ I+ + ET+ E L +H Sbjct: 12 NTLKIGYWNSCGITNKTNELEAYIKKEGIQIMLVTETRLERN---SNALNIKGFHTYLAQ 68 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 + + + I + F+++ + RI Sbjct: 69 NPTSHRKGGTATIVSQNIRHACLNPI---ETDFMQSAPIALIPSSRIRADMTIVAPIYCP 125 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 Y + L+ + I GD+N + Y ++ R+ Sbjct: 126 PVYKWTTEQFSKLFNHFEMLLDGKSKFILGGDWNCKHRLWGNYLSCARGRSLSQSILARK 185 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 + T +D + T L + Sbjct: 186 DLDIVATGHATHFPFDKKKQPSA------------------LDFAICKGFHTQKLKTYST 227 Query: 242 DTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTS 275 D SDH P+ + LD P+ Q + T+ Sbjct: 228 D------ELSSDHLPIQIVLD-PDDSDWQHNKTN 254 >gi|48596582|emb|CAD65869.1| pol protein [Drosophila melanogaster] Length = 1103 Score = 42.9 bits (99), Expect = 0.057, Method: Composition-based stats. Identities = 39/274 (14%), Positives = 75/274 (27%), Gaps = 31/274 (11%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + + WN I + + L A+IK+ I+ + ET+ E L +H Sbjct: 12 NTLKIGYWNSCGITNKTNELEAYIKKEGIQIMLVTETRLERN---SNALNIKGFHTYLAQ 68 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 + + + I + F+++ + RI Sbjct: 69 NPTSHRKGGTATIVSQNIRHACLNPI---ETDFMQSAPIALIPSSRIRADMTIVAPIYCP 125 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 Y + L+ + I GD+N + Y ++ R+ Sbjct: 126 PVYKWTTEQFSKLFNHFEMLLDGKSKFILGGDWNCKHRLWGNYLSCARGRSLSQSILARK 185 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 + T +D + T L + Sbjct: 186 DLDIVATGHATHFPFDKKKQPSA------------------LDFAICKGFHTQKLKTYST 227 Query: 242 DTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTS 275 D SDH P+ + LD P+ Q + T+ Sbjct: 228 D------ELSSDHLPIQIVLD-PDDSDWQHNKTN 254 >gi|254513404|ref|ZP_05125469.1| alkaline phosphatase [Rhodobacteraceae bacterium KLH11] gi|221532408|gb|EEE35404.1| alkaline phosphatase [Rhodobacteraceae bacterium KLH11] Length = 2116 Score = 42.9 bits (99), Expect = 0.058, Method: Composition-based stats. Identities = 10/48 (20%), Positives = 19/48 (39%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQ 270 +DHI ++ + + SDH P++ S + P + Q Sbjct: 1900 LDHIFVTDSLLEGANVDFVHVNVDFADSASDHEPIVASFTLEAPAEDQ 1947 >gi|163760748|ref|ZP_02167828.1| Endonuclease/exonuclease/phosphatase family protein [Hoeflea phototrophica DFL-43] gi|162282070|gb|EDQ32361.1| Endonuclease/exonuclease/phosphatase family protein [Hoeflea phototrophica DFL-43] Length = 368 Score = 42.9 bits (99), Expect = 0.058, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 30/79 (37%), Gaps = 22/79 (27%) Query: 207 FWDYYADSWSKNKGIRIDHIMLSPEA----TSLLHSA---------------RIDTKPR- 246 + Y+ + ++D+++ SP L ++ PR Sbjct: 289 WTLYHTRGPQERHLCQLDYLLASPALTRSNRDRLPDIIRAGQPWRTLFPQGQEVERYPRT 348 Query: 247 GWTKP--SDHTPVIVSLDI 263 GW +P SDH PV ++ D+ Sbjct: 349 GWDRPKASDHCPVAMTFDM 367 Score = 38.6 bits (88), Expect = 0.94, Method: Composition-based stats. Identities = 10/31 (32%), Positives = 13/31 (41%), Gaps = 4/31 (12%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNY 55 I E + DI+CLQE +N Y Sbjct: 66 IAEADADILCLQEV----ENLDTLHRFEYGY 92 >gi|71002678|ref|XP_756020.1| endonuclease/exonuclease/phosphatase family protein [Aspergillus fumigatus Af293] gi|66853658|gb|EAL93982.1| endonuclease/exonuclease/phosphatase family protein [Aspergillus fumigatus Af293] gi|159130073|gb|EDP55187.1| endonuclease/exonuclease/phosphatase family protein [Aspergillus fumigatus A1163] Length = 300 Score = 42.9 bits (99), Expect = 0.058, Method: Composition-based stats. Identities = 30/259 (11%), Positives = 67/259 (25%), Gaps = 27/259 (10%) Query: 26 KENNPDIICLQET------------KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSK 73 + + ICLQE K P ++ + G+ + S Sbjct: 46 RNQDA-FICLQEVLHNQLVDVLSGLKQPPSTIPKSASETQQWEYIGVGRDDGHKAGEYSP 104 Query: 74 YQPIEIVTHLPGDDLDVQARFIEATFTINT----QTLRIGNLYLPHGNPITSTKYDDKIS 129 V L + + + L IG Sbjct: 105 IFYQPSVWQLCHWESVWLSETPNKPSKGWDAASIRILTIGVFTHNITRHTVLVMNTHLDD 164 Query: 130 WIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNM 189 + A++ + + +G + + + + S L + Sbjct: 165 QGSQSRFEAAKIILQKIDEYRSGKFGTLIAGVFLAGDFNSQETQEAYNVLTGSESSLVDT 224 Query: 190 GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE---ATSLLHSARIDTKPR 246 + ++ ++ + Y + + RID+I++ P S + + R Sbjct: 225 AKVVEPSQHYGNYYTWTGFGYEGEDPT-----RIDYILIGPGKNKLGSWIVNGYAVLANR 279 Query: 247 --GWTKPSDHTPVIVSLDI 263 SDH V+ + + Sbjct: 280 FDSGVFLSDHRAVVADITL 298 >gi|289668451|ref|ZP_06489526.1| hypothetical protein XcampmN_08130 [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 245 Score = 42.9 bits (99), Expect = 0.059, Method: Composition-based stats. Identities = 15/95 (15%), Positives = 30/95 (31%), Gaps = 14/95 (14%) Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 +A + + + R + +++F + D IDHI++S Sbjct: 160 HPNAMLMGDFNCMADRPEMQSLYRHTRLQPPSCEVHTFPSWRPD-------RAIDHILVS 212 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 I+ SDH V + + +P Sbjct: 213 DSLV-------IEHTEAIPAAFSDHLAVGMDIRVP 240 >gi|289662605|ref|ZP_06484186.1| hypothetical protein XcampvN_05822 [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 255 Score = 42.9 bits (99), Expect = 0.059, Method: Composition-based stats. Identities = 15/95 (15%), Positives = 30/95 (31%), Gaps = 14/95 (14%) Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 +A + + + R + +++F + D IDHI++S Sbjct: 170 HPNAMLMGDFNCMADRPEMQSLYRHTRLQPPSCEVHTFPSWRPD-------RAIDHILVS 222 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 I+ SDH V + + +P Sbjct: 223 DSLV-------IEHTEAIPAAFSDHLAVGMDIRVP 250 >gi|167719260|ref|ZP_02402496.1| endonuclease/exonuclease/phosphatase family superfamily protein [Burkholderia pseudomallei DM98] Length = 107 Score = 42.9 bits (99), Expect = 0.059, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 4/38 (10%) Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 D ++ L ID G + SDH P+++ L Sbjct: 71 DFAFVTDTLVRRLSRCEID----GTVRASDHQPIVLEL 104 >gi|92115234|ref|YP_575162.1| endonuclease/exonuclease/phosphatase [Chromohalobacter salexigens DSM 3043] gi|91798324|gb|ABE60463.1| Endonuclease/exonuclease/phosphatase [Chromohalobacter salexigens DSM 3043] Length = 271 Score = 42.9 bits (99), Expect = 0.059, Method: Composition-based stats. Identities = 33/255 (12%), Positives = 70/255 (27%), Gaps = 44/255 (17%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQP 76 R+ + ++ + DI+ LQE + +F + + Y + G + + + Sbjct: 52 RLDLIGDTLR--DYDIVGLQEV--DGGSFRSGHVNQVEYLAKRGGFPHHYQQLNRNLGRV 107 Query: 77 IEIVTHLPGDDLDVQARFIEATFTINTQT-LRIGNLYLPHGNPITSTKYDDKISWIKRFL 135 + L Q T+ + + P + R L Sbjct: 108 AQHSNGLLSRLTPRQVDEYRLPGTLPGRGAIHARFGEGPDALHLVVAHLALGHRTRTRQL 167 Query: 136 RFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAI 195 + S+ ++ ++ GD N P + + Sbjct: 168 DYLSEIIQPLRHVVVMGDLNCTPDQINAHQRFCH-------------------------A 202 Query: 196 RATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHT 255 H S+ + +DHI++S + SDH Sbjct: 203 LPLHPVAMPLSYPAWQPR-------RALDHILISSAL--HAERFEVLD-----RLFSDHL 248 Query: 256 PVIVSLDIPEPRKKQ 270 PV V + +P ++ Sbjct: 249 PVAVDIQLPAACQRS 263 >gi|58583508|ref|YP_202524.1| hypothetical protein XOO3885 [Xanthomonas oryzae pv. oryzae KACC10331] gi|188575228|ref|YP_001912157.1| endonuclease/exonuclease/phosphatase [Xanthomonas oryzae pv. oryzae PXO99A] gi|58428102|gb|AAW77139.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae KACC10331] gi|188519680|gb|ACD57625.1| endonuclease/exonuclease/phosphatase [Xanthomonas oryzae pv. oryzae PXO99A] Length = 255 Score = 42.9 bits (99), Expect = 0.059, Method: Composition-based stats. Identities = 15/95 (15%), Positives = 30/95 (31%), Gaps = 14/95 (14%) Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 +A + + + R + +++F + D IDHI++S Sbjct: 170 HPNAMLMGDFNCMADRPEMQSLYRHTRLQPPSCEVHTFPSWRPD-------RAIDHILVS 222 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 I+ SDH V + + +P Sbjct: 223 DSLV-------IEHTEAIPAAFSDHLAVGMDIRVP 250 >gi|84625324|ref|YP_452696.1| hypothetical protein XOO_3667 [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|84369264|dbj|BAE70422.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 245 Score = 42.9 bits (99), Expect = 0.059, Method: Composition-based stats. Identities = 15/95 (15%), Positives = 30/95 (31%), Gaps = 14/95 (14%) Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 +A + + + R + +++F + D IDHI++S Sbjct: 160 HPNAMLMGDFNCMADRPEMQSLYRHTRLQPPSCEVHTFPSWRPD-------RAIDHILVS 212 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 I+ SDH V + + +P Sbjct: 213 DSLV-------IEHTEAIPAAFSDHLAVGMDIRVP 240 >gi|78046333|ref|YP_362508.1| hypothetical protein XCV0777 [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325928431|ref|ZP_08189622.1| metal-dependent hydrolase [Xanthomonas perforans 91-118] gi|78034763|emb|CAJ22408.1| conserved hypothetical protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325541148|gb|EGD12699.1| metal-dependent hydrolase [Xanthomonas perforans 91-118] Length = 255 Score = 42.9 bits (99), Expect = 0.059, Method: Composition-based stats. Identities = 15/95 (15%), Positives = 30/95 (31%), Gaps = 14/95 (14%) Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 +A + + + R + +++F + D IDHI++S Sbjct: 170 HPNAMLMGDFNCMADRPEMQSLYRHTRLQPPSCEVHTFPSWRPD-------RAIDHILVS 222 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 I+ SDH V + + +P Sbjct: 223 DSLV-------IEHTEAIPAAFSDHLAVGMDIRVP 250 >gi|317478482|ref|ZP_07937642.1| endonuclease/Exonuclease/phosphatase [Bacteroides sp. 4_1_36] gi|316905371|gb|EFV27165.1| endonuclease/Exonuclease/phosphatase [Bacteroides sp. 4_1_36] Length = 287 Score = 42.9 bits (99), Expect = 0.059, Method: Composition-based stats. Identities = 30/269 (11%), Positives = 75/269 (27%), Gaps = 30/269 (11%) Query: 6 VATWNV---------NSIRARIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQS--L 53 V T+NV N+ R + I +PD++ +QE + ++ Q L Sbjct: 33 VMTFNVRLDIPSDSVNNWNYRKGDACRMIAYYSPDLLGMQEVLHNQMEDLKRGLPQYTAL 92 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 + + + + + + + + + Sbjct: 93 GVGRDDGKEAGEYCPIFFRTDRFTLVEYGNFSL-SEQPETIGIKGWDASYNRVTTWAILQ 151 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 N ++ + + R +L L++ A D N Sbjct: 152 EKNNGQKFVYFNTHLDNDGKTARKEGVQLILDKIKEIAPDM--------PAIITGDFNCT 203 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEA 232 ++ + A + W ++ + + +D++ ++ Sbjct: 204 PGEEPLQTLEKGGMENAAKTAAVTYGPS------WSFHDFGRLPVEERVLLDYVFVTKG- 256 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + + R+ + SDH P++V L Sbjct: 257 -AKIDRYRVIQDKPENSYLSDHCPILVEL 284 >gi|330957166|gb|EGH57426.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas syringae pv. maculicola str. ES4326] Length = 291 Score = 42.9 bits (99), Expect = 0.060, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 14/61 (22%) Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 +F + +DHI+LSP T L ++ +P SDH PV V + +P Sbjct: 230 TFPSWRPK-------RCLDHILLSPTLT--LERVQVLAQP-----ISDHLPVAVEIRLPA 275 Query: 266 P 266 Sbjct: 276 S 276 >gi|322696490|gb|EFY88281.1| Endonuclease/Exonuclease/phosphatase family protein [Metarhizium acridum CQMa 102] Length = 325 Score = 42.9 bits (99), Expect = 0.060, Method: Composition-based stats. Identities = 32/291 (10%), Positives = 71/291 (24%), Gaps = 41/291 (14%) Query: 2 SVV--TVATWNVNSIRARIHNLAAWIKENNPDI--------------------ICLQE-T 38 + + + ++N IR + + E D+ +CLQE Sbjct: 45 ATMPVRLISFN---IRYAANEDERALAEQPWDVRCPKVCSQMRFITAGHESPFVCLQESL 101 Query: 39 KTEDKNFPFETLQSLNYHIETCGQKSYNGVAI----LSKYQPIEIVTHLPGDDLDVQARF 94 ++ + E + + + L Sbjct: 102 YSQLNDIQAELGEPW---AHIGRGREEGETDGEFSPIFYRSDAWACELSETRWLSKTPEK 158 Query: 95 IEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDY 154 + + L+ N I R S +L ++ ++ Sbjct: 159 PSRGWDAALNRIVTIGLFSHRANGTKVVVMSTHFDHIGVEARKNSAKLLIKFANEWSHGK 218 Query: 155 NIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY-SFWDYYAD 213 + P + ++ D + I Y + Y + Sbjct: 219 GVPP------SVVLIGGDFNSEPDDEAYQMMTAPGSGMSDISGLVPERGHYGNHLTYTSF 272 Query: 214 SWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT-KPSDHTPVIVSLDI 263 RID + + T+ + + + + SDH P++ L I Sbjct: 273 GEPNEHPQRIDFLFIQEPRTAQVETFGVLANSFDDQIRFSDHRPIVSDLQI 323 >gi|147858056|emb|CAN82510.1| hypothetical protein VITISV_012726 [Vitis vinifera] Length = 1308 Score = 42.9 bits (99), Expect = 0.060, Method: Composition-based stats. Identities = 22/238 (9%), Positives = 54/238 (22%), Gaps = 28/238 (11%) Query: 18 IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPI 77 + + ++ D+ C+QETK + + V Sbjct: 501 RKVIKSVFRKQKVDLFCIQETKIQ---------------------IMTDRVVRSLGTGRF 539 Query: 78 EIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF 137 L + + +G L + + Sbjct: 540 LDWKVLNACGMAGGILICWDKRALELLEWEVGQFSLSCRFRTMENGVIWAFTGVYGPFTR 599 Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA 197 + EE G + +N + + + + + ++ + + Sbjct: 600 LEREWLWEEVGAIRGIWEGPWCLGGDFNITLAQGERSRQGRITSAMRRFAEVVDDLGLVD 659 Query: 198 THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK--PSD 253 +++ + R+D ++SP G PSD Sbjct: 660 LQLQRGAFTW----TGGLNNMSRARLDRFLVSPCWLDQFSR-FYLRGVVGREGLPPSD 712 >gi|21220603|ref|NP_626382.1| hypothetical protein SCO2125 [Streptomyces coelicolor A3(2)] gi|256788258|ref|ZP_05526689.1| hypothetical protein SlivT_27549 [Streptomyces lividans TK24] gi|289772150|ref|ZP_06531528.1| conserved hypothetical protein [Streptomyces lividans TK24] gi|5689935|emb|CAB51973.1| hypothetical protein [Streptomyces coelicolor A3(2)] gi|289702349|gb|EFD69778.1| conserved hypothetical protein [Streptomyces lividans TK24] Length = 253 Score = 42.9 bits (99), Expect = 0.060, Method: Composition-based stats. Identities = 14/36 (38%), Positives = 22/36 (61%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQE 37 +V+ V ++N+ S+R LA IK PD++ LQE Sbjct: 19 AVIRVLSYNIRSLRDDTDALARVIKACAPDLVLLQE 54 >gi|323530343|ref|YP_004232495.1| endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1001] gi|323387345|gb|ADX59435.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1001] Length = 258 Score = 42.5 bits (98), Expect = 0.060, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 19/41 (46%), Gaps = 7/41 (17%) Query: 4 VTVATWNV------NSIRARIHNLAAWIKENNPDIICLQET 38 + + T+N+ + R+ +A I N D++ LQE Sbjct: 34 LRIVTYNIHGAVGTDGRRSAA-RIAEVITALNADVVALQEV 73 >gi|48596584|emb|CAD65871.1| pol protein [Drosophila melanogaster] Length = 1103 Score = 42.5 bits (98), Expect = 0.060, Method: Composition-based stats. Identities = 39/274 (14%), Positives = 75/274 (27%), Gaps = 31/274 (11%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + + WN I + + L A+IK+ I+ + ET+ E L +H Sbjct: 12 NTLKIGYWNSCGITNKTNELEAYIKKEGIQIMLVTETRLERN---SNALNIKGFHTYLAQ 68 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 + + + I + F+++ + RI Sbjct: 69 NPTSHRKGGTATIVSQNIRHACLNPI---ETDFMQSAPIALIPSSRIRADMTIVAPIYCP 125 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 Y + L+ + I GD+N + Y ++ R+ Sbjct: 126 PVYKWTTEQFSKLFNHFEMLLDGKSKFILGGDWNCKHRLWGNYLSCARGRSLSQSILARK 185 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 + T +D + T L + Sbjct: 186 DLDIVATGHATHFPFDKKKQPSA------------------LDFAICKGFHTQKLKTYST 227 Query: 242 DTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTS 275 D SDH P+ + LD P+ Q + T+ Sbjct: 228 D------ELSSDHLPIQIVLD-PDDSDWQHNKTN 254 >gi|254563662|ref|YP_003070757.1| endonuclease/exonuclease/phosphatase [Methylobacterium extorquens DM4] gi|254270940|emb|CAX26945.1| putative endonuclease/exonuclease/phosphatase [Methylobacterium extorquens DM4] Length = 275 Score = 42.5 bits (98), Expect = 0.061, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 3/43 (6%) Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +R+DH+ +S + + P K SDH PV+ + I Sbjct: 233 LRVDHVFVSERVA--VERIAVVDTPLAR-KASDHLPVLAEIRI 272 Score = 42.1 bits (97), Expect = 0.094, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 7/41 (17%) Query: 4 VTVATWNV------NSIRARIHNLAAWIKENNPDIICLQET 38 + + T+NV + R +A I PDI+ LQE Sbjct: 29 LRLLTYNVRHCRGTDG-RVAPERVARVIAALAPDIVALQEV 68 >gi|240141150|ref|YP_002965630.1| putative endonuclease/exonuclease/phosphatase [Methylobacterium extorquens AM1] gi|240011127|gb|ACS42353.1| putative endonuclease/exonuclease/phosphatase [Methylobacterium extorquens AM1] Length = 275 Score = 42.5 bits (98), Expect = 0.061, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 3/43 (6%) Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +R+DH+ +S + + P K SDH PV+ + I Sbjct: 233 LRVDHVFVSERVA--VERIAVVDTPLAR-KASDHLPVLAEIRI 272 Score = 42.1 bits (97), Expect = 0.094, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 7/41 (17%) Query: 4 VTVATWNV------NSIRARIHNLAAWIKENNPDIICLQET 38 + + T+NV + R +A I PDI+ LQE Sbjct: 29 LRLLTYNVRHCRGTDG-RVAPERVARVIAALAPDIVALQEV 68 >gi|222624956|gb|EEE59088.1| hypothetical protein OsJ_10924 [Oryza sativa Japonica Group] Length = 392 Score = 42.5 bits (98), Expect = 0.061, Method: Composition-based stats. Identities = 41/251 (16%), Positives = 75/251 (29%), Gaps = 16/251 (6%) Query: 16 ARIHNLAAWIKENNPDIICLQETKTEDKN---FPFETLQSLNY-HIETCGQKSYNGVAIL 71 AR ++A ++E D++ LQ + E+ E + L ++ G A+L Sbjct: 114 ARRRSVAEALREAGADMVALQNVRAEEGRGMRPLSELAEGLGMRYVFAESWAPEYGNAVL 173 Query: 72 SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWI 131 S++ D D + + + +L H + K D I Sbjct: 174 SRWPIKRWNARRLADHFDFRNVMRATIEVPGAGEVNLYCTHLDHLDEGLRMKQVDSILRF 233 Query: 132 KRFLRFASQR--LELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNM 189 L+ A + I + H+ +++ L+ ++ Sbjct: 234 ADGHHHILAGGLNALDASDYSADRWAAIAKYHEEIGKPPPKSEVMRHLKAKRYVDAKDFA 293 Query: 190 GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT 249 G DA D G R+D+I+ SP + Sbjct: 294 GGRDAGLVVVPNGQ-----DVQGTCK---YGTRVDYILASPNSPYNFVPGS--YAVVPSM 343 Query: 250 KPSDHTPVIVS 260 SDH V+V Sbjct: 344 GTSDHHIVMVD 354 >gi|221101359|ref|XP_002169156.1| PREDICTED: similar to pol-like protein [Hydra magnipapillata] Length = 1476 Score = 42.5 bits (98), Expect = 0.061, Method: Composition-based stats. Identities = 30/242 (12%), Positives = 63/242 (26%), Gaps = 23/242 (9%) Query: 1 MSVVTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 M + T NVN + +++ L D+ +QET +KN Sbjct: 1 MERLKFYTSNVNGLNNGSKLKTLINNFINKPYDVFLIQETHLNNKNINLLKNVWEGDVFY 60 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + S+ + + D I+ + I + Sbjct: 61 SPSDTSFTRGTAILFKLNFDKPLLSGNDLKGSYNYVAIKFIGIDYLIINIYAPSGVGTSQ 120 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + + ++ GD+N+ D Y + Sbjct: 121 KLRVNL------FNELINEFKNKDLNNFQIVMGGDFNMTLSNKDRYPTLFK----SECPS 170 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG---IRIDHIMLSPEATSL 235 + L + D R + Y+ ++ + G RID +S ++ Sbjct: 171 CKTLKTLLNLLEIEDTWRVFNPYKQEYT--------FAASNGVSQSRIDRFYISKKSRQN 222 Query: 236 LH 237 + Sbjct: 223 IK 224 >gi|218532583|ref|YP_002423399.1| endonuclease/exonuclease/phosphatase [Methylobacterium chloromethanicum CM4] gi|218524886|gb|ACK85471.1| Endonuclease/exonuclease/phosphatase [Methylobacterium chloromethanicum CM4] Length = 328 Score = 42.5 bits (98), Expect = 0.061, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 3/43 (6%) Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +R+DH+ +S + + P K SDH PV+ + I Sbjct: 286 LRVDHVFVSERVA--VERIAVVDTPLAR-KASDHLPVLAEIRI 325 Score = 42.1 bits (97), Expect = 0.097, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 7/41 (17%) Query: 4 VTVATWNV------NSIRARIHNLAAWIKENNPDIICLQET 38 + + T+NV + R +A I + PDI+ LQE Sbjct: 82 LRLLTYNVRHCRGTDG-RVAPERVARVIADLAPDIVALQEV 121 >gi|163853725|ref|YP_001641768.1| endonuclease/exonuclease/phosphatase [Methylobacterium extorquens PA1] gi|163665330|gb|ABY32697.1| Endonuclease/exonuclease/phosphatase [Methylobacterium extorquens PA1] Length = 328 Score = 42.5 bits (98), Expect = 0.061, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 3/43 (6%) Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +R+DH+ +S + + P K SDH PV+ + I Sbjct: 286 LRVDHVFVSERVA--VERIAVVDTPLAR-KASDHLPVLAEIRI 325 Score = 42.1 bits (97), Expect = 0.094, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 7/41 (17%) Query: 4 VTVATWNV------NSIRARIHNLAAWIKENNPDIICLQET 38 + + T+NV + R +A I PDI+ LQE Sbjct: 82 LRLLTYNVRHCRGTDG-RVAPERVARVIAALAPDIVALQEV 121 >gi|237740410|ref|ZP_04570891.1| predicted protein [Fusobacterium sp. 2_1_31] gi|229422427|gb|EEO37474.1| predicted protein [Fusobacterium sp. 2_1_31] Length = 261 Score = 42.5 bits (98), Expect = 0.061, Method: Composition-based stats. Identities = 37/277 (13%), Positives = 79/277 (28%), Gaps = 33/277 (11%) Query: 4 VTVATWNVNSIRARIHN---LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 + WN+N R + +EN+ DI+ + E ++ N + SL+Y + Sbjct: 1 MKFLFWNIN----RKDLSNTIIEICQENDIDILGVCE--GQNLNI-KNLIGSLDYEEISV 53 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + L + I I+ + D + I + + + + N + Sbjct: 54 IHNLEDNGIKLFCRENISIIANEENTDYHKEYTLILESIKYKLFLVHLPSKLHLTENEQS 113 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + + + + + Sbjct: 114 LLVPRFECTKQAMQRTLIFGDFNMNPFENGIISSETFHALSSKEITLKKKRRVNKKE--- 170 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR-IDHIMLSPEATSLLH-- 237 N + R ++ Y YY S N D +++SP+ ++ Sbjct: 171 --RYFFYNPTWFLYARKHNEIIGSY----YYNKSSPNNLFWNMFDQVIISPDLINVFEFN 224 Query: 238 SARIDTKPR-----------GWTKPSDHTPVIVSLDI 263 +I T + + SDH P++ L+I Sbjct: 225 KFKIITDTKQKNLLYEDKTPNKKRYSDHLPILFELNI 261 >gi|238576283|ref|XP_002387981.1| hypothetical protein MPER_13062 [Moniliophthora perniciosa FA553] gi|215448887|gb|EEB88911.1| hypothetical protein MPER_13062 [Moniliophthora perniciosa FA553] Length = 36 Score = 42.5 bits (98), Expect = 0.061, Method: Composition-based stats. Identities = 8/35 (22%), Positives = 14/35 (40%), Gaps = 3/35 (8%) Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 LS + I ++ G SDH P+ + + Sbjct: 2 LSKRVVEKVKMCEIRSEIYG---ASDHCPLTMEYE 33 >gi|299142905|ref|ZP_07036032.1| endonuclease/Exonuclease/phosphatase [Prevotella oris C735] gi|298575634|gb|EFI47513.1| endonuclease/Exonuclease/phosphatase [Prevotella oris C735] Length = 313 Score = 42.5 bits (98), Expect = 0.062, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 22/61 (36%), Gaps = 21/61 (34%) Query: 223 IDHIMLSPEATSLLHSARI--------DTKPRGWTKP-------------SDHTPVIVSL 261 +DH++ S L S I D + G +P SDH P++V Sbjct: 252 LDHVLCSEALVPLFRSCTIADFPFLLTDDEVYGGLQPLRNFHGAKYLNGFSDHLPLVVKF 311 Query: 262 D 262 D Sbjct: 312 D 312 >gi|298373566|ref|ZP_06983555.1| endonuclease/exonuclease/phosphatase family protein [Bacteroidetes oral taxon 274 str. F0058] gi|298274618|gb|EFI16170.1| endonuclease/exonuclease/phosphatase family protein [Bacteroidetes oral taxon 274 str. F0058] Length = 317 Score = 42.5 bits (98), Expect = 0.062, Method: Composition-based stats. Identities = 29/261 (11%), Positives = 68/261 (26%), Gaps = 26/261 (9%) Query: 3 VVTVATWNVNS-IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ + WN R + ++ PDI+ + E E ++ + + Sbjct: 1 MIRIIEWNCQGAFRLKNRHILDLC----PDILIVAE--CEKEHILQFGKLTPPPNDFIWY 54 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 S G+AI S + + + ++ Sbjct: 55 GDSNKGIAIFSYSGFKLQRLKEFNPNFRYIIPIEVYDDARSFMLFAVWAKDDRRNPLVSY 114 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + + + L + E + V Sbjct: 115 IGQVWGAINYYQTILQENSILMGDFN--------------SNRIWDGKERIGNHSDVVCF 160 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 + + L +F+ + S + ID++ S T ++ Sbjct: 161 LKRFGIESLYHKQHNEEQGQEKLKTFFMHRNISKPYH----IDYVFASDRITRNGYNLT- 215 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 P+ W SDH P+++ ++ Sbjct: 216 LGTPQNWIDKSDHIPLMLDIN 236 >gi|255713086|ref|XP_002552825.1| KLTH0D02310p [Lachancea thermotolerans] gi|238934205|emb|CAR22387.1| KLTH0D02310p [Lachancea thermotolerans] Length = 739 Score = 42.5 bits (98), Expect = 0.062, Method: Composition-based stats. Identities = 37/295 (12%), Positives = 71/295 (24%), Gaps = 53/295 (17%) Query: 17 RIHNLAAWIKENNPDIICLQETKT-EDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75 R L I N DI+CLQE + ++F L+ Y + + + Sbjct: 439 RREKLKEQILSYNTDIVCLQEVECKTYEDFWAPLLREKGYSGIFHTKTRARTMHSKDSKK 498 Query: 76 PIEIVT--------------------HLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + ++ + L + ++ Sbjct: 499 VDGCCFFYKDSEFKLMFKEAVDFSSVWMKHKKFQRTEDYLNRAMNKDNVALVVKLQHIKS 558 Query: 116 GNPITSTK--------------------YDDKISWIKRFLRFASQRLELEEPLIFAGDYN 155 G + + D IK + + + P++ GD+N Sbjct: 559 GEHVWAATTHLHWDPQFNDVKTFQVGVLLDYMEKVIKEQNNCNNTQELKKVPVVICGDFN 618 Query: 156 IIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW 215 +E R Q + + + ++ Sbjct: 619 SQTNSAVYELLNTGNVSKHRDIEGRDFGYMSQKNYAHNLPLKSSYDSIGELPFTNLTPTF 678 Query: 216 SKNKGIRIDHIM-LSPEATSLLHSARIDTKPRGW-------TKPSDHTPVIVSLD 262 + ID+I S ID + PSDH P+I + Sbjct: 679 TDV----IDYIWYSSQGLRVRGLLGEIDPEYASKFIGFPNDKFPSDHIPLITRFE 729 >gi|147789894|emb|CAN76132.1| hypothetical protein VITISV_022809 [Vitis vinifera] Length = 2404 Score = 42.5 bits (98), Expect = 0.063, Method: Composition-based stats. Identities = 22/168 (13%), Positives = 52/168 (30%), Gaps = 7/168 (4%) Query: 93 RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG 152 + + +G + + S + + L EE G Sbjct: 1230 FVFWDKRVXELEGMEVGLFSISCRFKNCEDGFSWIFSGVYGPTLKRYKELFWEELGAIRG 1289 Query: 153 DYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYA 212 ++ +N I + N++ + S ++ + +R +++ + Sbjct: 1290 LWSDPWCIRGDFNLIRFPNESRRGGRLSSSMRRFSEVIDDLDLRDLPLQGGPFTW----S 1345 Query: 213 DSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 + R+D ++S + A T PR SDH P+++ Sbjct: 1346 GGLNNQAMSRLDRFLVSKDWEGHFKGAVQCTLPR---PVSDHFPILLD 1390 >gi|39995817|ref|NP_951768.1| endonuclease/exonuclease/phosphatase family protein [Geobacter sulfurreducens PCA] gi|39982581|gb|AAR34041.1| endonuclease/exonuclease/phosphatase family protein [Geobacter sulfurreducens PCA] Length = 335 Score = 42.5 bits (98), Expect = 0.063, Method: Composition-based stats. Identities = 44/332 (13%), Positives = 78/332 (23%), Gaps = 78/332 (23%) Query: 1 MSVVTVATWNVNSI------------RARIHNLAAWIKENNPDIICLQE----------- 37 M V + +WNV + R R + I+E PDI+CL E Sbjct: 1 MGTVKITSWNVAHLERLTRAHPTAKERRRRDAVVREIRELAPDILCLLEGPAGEAGIDLV 60 Query: 38 -----------TKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGD 86 K D N+ + I ++ A L + + Sbjct: 61 ANDLLDGEWVAVKAADGNYATRG----DQWIWFLVRQDLAARASLLPVGTWDAFAGVSWT 116 Query: 87 DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELE- 145 + I + I I+ +R R +R E Sbjct: 117 CHLWGEFTEGTHRHYRHPQVLILDWNGLRVEFIGLHLKSKFINQGERLWRDERERFIREA 176 Query: 146 -------------EPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192 + + P + E + F L Sbjct: 177 LTARIKMATEAANVRAYIDAKFRQVGNPALFVLGDFNDGPGKEYFEEQYLFFDLIANIQG 236 Query: 193 DAI-------RATHDTHHLYSFWDYYADSW---SKNKGIRIDHIMLSPEATS-------L 235 + D W + + I +DHI+ + + Sbjct: 237 NVFATSRFLNHGLFDIPDEL-CWTVRFRDFVQPDRRPEILLDHILFTQGLVNGSLPWQVK 295 Query: 236 LHSARIDTKPRGWTKP--------SDHTPVIV 259 H+ +++ + SDH PV + Sbjct: 296 PHAGKVEHEVHELANAGLPKDSQTSDHRPVSL 327 >gi|88802681|ref|ZP_01118208.1| endonuclease/exonuclease/phosphatase family protein [Polaribacter irgensii 23-P] gi|88781539|gb|EAR12717.1| endonuclease/exonuclease/phosphatase family protein [Polaribacter irgensii 23-P] Length = 329 Score = 42.5 bits (98), Expect = 0.063, Method: Composition-based stats. Identities = 43/303 (14%), Positives = 83/303 (27%), Gaps = 70/303 (23%) Query: 5 TVATWNVNSIRARIHNLAAWI--------KENNPD--------------------IICLQ 36 V +WNV + +EN PD ++ LQ Sbjct: 52 KVLSWNVA-------HFVDSFDDPYIDSKRENQPDSLMGNKVASLVVALRRIDAAVVVLQ 104 Query: 37 ETKTEDKNFPF----ETLQSLNY--------HIETCGQKSYNGVAILSKYQPIEIVTHLP 84 E E F E LQ + Y H + + Y + T + Sbjct: 105 E--FESAKFLRSLANEHLQDMGYKYFADVPSHGWYMNVVMMSKFPLGIIYGYGNVTTPVL 162 Query: 85 GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL 144 G + A + T ++ + + + + L+ Sbjct: 163 GASIASGATETQNTLNTRMWSIDVYPSPNYNFLLTGVHLKAGRGERNVAMRKGQINFLKQ 222 Query: 145 EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL 204 + D N +N + + L+ + +K + A+ T D Sbjct: 223 QFKRFLKEDKNKNILVLGDFNSVQGSEEINLFLQEKNKREKFIDPLPDSAMTHTSDAPK- 281 Query: 205 YSFWDYYADSWSKNKGIRIDHIMLSPEATS--LLHSARI--DTKPRGWTKPSDHTPVIVS 260 R+D+++++ + SA++ P + SDH PV ++ Sbjct: 282 ----------------RRLDYVLINTNMYKEYKVGSAKVSSLFSPLKMREISDHLPVTIN 325 Query: 261 LDI 263 I Sbjct: 326 FTI 328 >gi|325282271|ref|YP_004254812.1| Endonuclease/exonuclease/phosphatase [Deinococcus proteolyticus MRP] gi|324314080|gb|ADY25195.1| Endonuclease/exonuclease/phosphatase [Deinococcus proteolyticus MRP] Length = 326 Score = 42.5 bits (98), Expect = 0.064, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 10/62 (16%) Query: 4 VTVATWNVNSIRAR-----IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL-NYHI 57 +T+ T+N+ AR LAA I+ + D++ LQET D F E L+ L YH Sbjct: 105 LTLLTYNI----ARGTQGSAETLAAQIRAQDADLVTLQETNGWDAEFTPELLRRLPGYHA 160 Query: 58 ET 59 Sbjct: 161 AH 162 >gi|290976084|ref|XP_002670771.1| predicted protein [Naegleria gruberi] gi|284084333|gb|EFC38027.1| predicted protein [Naegleria gruberi] Length = 551 Score = 42.5 bits (98), Expect = 0.064, Method: Composition-based stats. Identities = 30/254 (11%), Positives = 58/254 (22%), Gaps = 38/254 (14%) Query: 17 RIHNLAAWIKENNPDIICLQET---KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSK 73 R + + + +KE DII LQE F E + + + +G+ + + Sbjct: 325 RKYKIFSVLKERRFDIIGLQEIDNQHASQIQFFLEQ-EGFSVYHSYKNYPKKDGLILAIR 383 Query: 74 YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKR 133 EI + + + R + H + + Sbjct: 384 NTKFEIFNKGEKTLVKEYPEVFQYVIARDRVKGRFFCIINCHLTFQPRDTGPREKQVNEI 443 Query: 134 FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTD 193 + + +I+ GD+N P E+ Sbjct: 444 LNQIGKIADPQKTSIIWFGDFNTSPHEKPIQLIEACESIPLQKSHDTVQEFWTCCGTTGR 503 Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK------PRG 247 D+I SP + + + Sbjct: 504 NSIV--------------------------DYIWHSPSL--QVKDSGPCLEFVPKSSIPD 535 Query: 248 WTKPSDHTPVIVSL 261 SDH P+ Sbjct: 536 EDHGSDHLPLFAEF 549 >gi|256085040|ref|XP_002578732.1| neutral sphingomyelinase [Schistosoma mansoni] gi|238664115|emb|CAZ34970.1| putative neutral sphingomyelinase [Schistosoma mansoni] Length = 631 Score = 42.5 bits (98), Expect = 0.064, Method: Composition-based stats. Identities = 41/275 (14%), Positives = 69/275 (25%), Gaps = 31/275 (11%) Query: 29 NPDIICLQETKTEDK--NFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGD 86 + D+I LQE E + Y G+ I SK+ + TH Sbjct: 40 DFDVILLQEIWLESDYRKLRNILDEKYPYSNYFYCNLIGTGMCIFSKWTIECVFTHPFTA 99 Query: 87 DLDVQARFIEATFTINTQTL-RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELE 145 + + L RI + N + + +L Sbjct: 100 NGYPHLIHQADYYCGKGIGLARITSKEGFRINFYVTHLIARYELDRMLDRYNGHRISQLV 159 Query: 146 EPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT---- 201 E + F + +E+ + KL + + + + Sbjct: 160 EVMEFVRMTSTG-SDAIIITGDFNLESNTSAIELFSTSLKLSDAWLNNTVALKNTNITDL 218 Query: 202 -HHLYSF----WDYYADSWSK--NKGIRIDHIM--LSPEATSL----------LHSARID 242 + Y W+ G R+D+I P +S +D Sbjct: 219 ESEGCTCDRADNPYRNQLWTNTYGNGERLDYIFYRSGPSIIDSFYIPSYAKLVCNSCWLD 278 Query: 243 -TKPRGWTKP---SDHTPVIVSLDIPEPRKKQQDS 273 K G SDH V S I R + Sbjct: 279 MRKVPGDPHGLHYSDHEGVAASFTITRLRNPVKPE 313 >gi|254825627|ref|ZP_05230628.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes FSL J1-194] gi|254853407|ref|ZP_05242755.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes FSL R2-503] gi|254992839|ref|ZP_05275029.1| endonuclease/exonuclease/phosphatase family protein [Listeria monocytogenes FSL J2-064] gi|255519856|ref|ZP_05387093.1| endonuclease/exonuclease/phosphatase family protein [Listeria monocytogenes FSL J1-175] gi|300764548|ref|ZP_07074540.1| endonuclease/exonuclease/phosphatase family protein [Listeria monocytogenes FSL N1-017] gi|258606777|gb|EEW19385.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes FSL R2-503] gi|293594872|gb|EFG02633.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes FSL J1-194] gi|300514655|gb|EFK41710.1| endonuclease/exonuclease/phosphatase family protein [Listeria monocytogenes FSL N1-017] Length = 256 Score = 42.5 bits (98), Expect = 0.064, Method: Composition-based stats. Identities = 37/275 (13%), Positives = 72/275 (26%), Gaps = 34/275 (12%) Query: 3 VVTVATWNVN---------SIRARIHNLAAWIKENNPDIICLQETKTEDKNFP----FET 49 + +V T+N+ S R + + + D + E+ P + Sbjct: 1 MFSVTTFNIRFDDTSERKKSWELRKTLTKSLLDKYQWDFMG-----VEEPLLPQMCDMKE 55 Query: 50 LQSLNYH-IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108 +Q +Y + + + L T + + Sbjct: 56 MQDWDYFGVGRDDGFEKGEFTAVFYNSTRFTLLQEGHFWLSETPEVPSIHSTAMFPRICV 115 Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168 + + FASQ L + +I I+ + Sbjct: 116 WGKFADSDGKQVYIFNTHLDHISEEARLFASQLLLKKAAIIAENSPVIVLGDFNTQPNTP 175 Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 N + Q + G T + H +N+ +ID+I + Sbjct: 176 TYNYITEKYQDAQLISQKPAKGPTGSFHDFHPL-------------RPQNELEKIDYIFV 222 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 S E +++ SDH PV +LD Sbjct: 223 SNEF--KVNTYETIVDEVDGFSASDHFPVTANLDW 255 >gi|298204347|gb|ADI61822.1| endonuclease-reverse transcriptase [Bombyx mori] Length = 996 Score = 42.5 bits (98), Expect = 0.064, Method: Composition-based stats. Identities = 34/257 (13%), Positives = 73/257 (28%), Gaps = 20/257 (7%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN-YHIETCGQK 63 AT NV ++ + LA+ K D CLQET+ + ++ + Sbjct: 54 RFATLNVGTLTGKTKELASLFKRRKVDFACLQETRWT-GAKALNIGEGYKLMYVGARHGR 112 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 + +A+ +++ + + D L +E T Sbjct: 113 NGVAIAVKAEHLENFLEVNRINDRLMSLKVLVEGEVINVISAYAPQAGCSRAEKDSFWTT 172 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 +D + I + + H EV S Sbjct: 173 LEDHLRQIPSKETMLLGGDLNGHIGTENKAFKRVHGGHG-------FGTINEEGEVILST 225 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 ++ T+ A H + ++ S ID+I+++ + + ++ Sbjct: 226 AAAFDLAITNTFFAKKPEHTI-TYKSGQTTSQ-------IDYILVNRAYIGRVTNCKVIP 277 Query: 244 KPRGWTKPSDHTPVIVS 260 T+ H V++ Sbjct: 278 GECAVTQ---HRIVVMD 291 >gi|45185112|ref|NP_982829.1| ABL118Wp [Ashbya gossypii ATCC 10895] gi|44980748|gb|AAS50653.1| ABL118Wp [Ashbya gossypii ATCC 10895] Length = 504 Score = 42.5 bits (98), Expect = 0.064, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%) Query: 17 RIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYHIETCGQKSYN 66 R L + ++ NPD+ICLQE T+ K+F + LQ Y + N Sbjct: 135 RSKVLLSELQYYNPDVICLQEIDHTQYKSFWMDALQHAGYCSKFHRSFGKN 185 >gi|71480111|ref|NP_001025131.1| protein angel homolog 2 [Danio rerio] gi|82077818|sp|Q5RGT6|ANGE2_DANRE RecName: Full=Protein angel homolog 2 gi|55962530|emb|CAI11673.1| novel protein similar to human KIAA0759 [Danio rerio] Length = 569 Score = 42.5 bits (98), Expect = 0.065, Method: Composition-based stats. Identities = 15/99 (15%), Positives = 33/99 (33%), Gaps = 5/99 (5%) Query: 15 RARIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAIL 71 R R N+ +++ + DI+CLQE ++ ++ + L+SL YH E + Sbjct: 230 RNRFPNIIKELEQYSADIMCLQEV--QEDHYKQQIKPSLESLGYHCEFKRRTGLKPDGCA 287 Query: 72 SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 ++ + + + Sbjct: 288 VIFKRERFSLVSCHPVEYFRRGVPLMDRDNVGLIVLLRP 326 >gi|315223415|ref|ZP_07865272.1| endonuclease/exonuclease/phosphatase [Capnocytophaga ochracea F0287] gi|314946588|gb|EFS98579.1| endonuclease/exonuclease/phosphatase [Capnocytophaga ochracea F0287] Length = 266 Score = 42.5 bits (98), Expect = 0.066, Method: Composition-based stats. Identities = 45/274 (16%), Positives = 71/274 (25%), Gaps = 31/274 (11%) Query: 2 SVV-TVATWNVNSIRARIHNLAA-------WIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + +ATWNV R IKE N DI+ L E + L S Sbjct: 12 NTMYKIATWNV----ERPKKGTEKTSLAITKIKEVNADILVLTE---NATSISLTELYSF 64 Query: 54 NYHI-ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 + H + V+I SK+Q + + T+ + Sbjct: 65 SVHSLAYERTPEEHWVSIFSKWQITQQIKTFDNYRTACAVIKAPFGDIAVFGTIIPYHQA 124 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 G + Y K + A ++ E Sbjct: 125 GVSGVRYGNLGYKQWEYHEKDLHQQAKNWEDIIEETQIPLWVMGDFNQSRYNLQGYGTEK 184 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 L L + D H + +N IDHI ++ Sbjct: 185 VRQILTNYLEKLDLSCVTEGDLSPFLHPDPIKH---------KIRNN---IDHICIANNF 232 Query: 233 TSLLHSARI---DTKPRGWTKPSDHTPVIVSLDI 263 + ++ D SDH V +S DI Sbjct: 233 IKQMKQYQVGAWDHFSEEGKYMSDHNGVFISFDI 266 >gi|255716040|ref|XP_002554301.1| KLTH0F02090p [Lachancea thermotolerans] gi|238935684|emb|CAR23864.1| KLTH0F02090p [Lachancea thermotolerans] Length = 440 Score = 42.5 bits (98), Expect = 0.066, Method: Composition-based stats. Identities = 34/261 (13%), Positives = 78/261 (29%), Gaps = 29/261 (11%) Query: 18 IHNLAAWIKENNPDIICLQET--KTEDKNFPFETLQSLNY-HIETCGQKSYNGVAILSKY 74 +H L ++ D++ LQE K++ + Y I G + G+AILSK Sbjct: 47 LHGLEEDSGSDDYDVVALQEIWCKSDWEYIEETCRHRYPYRRIFYSGIIAGPGLAILSKI 106 Query: 75 QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI---------------GNLYLPHGNPI 119 + + A F + + ++ + +++ P+ Sbjct: 107 PIESTFLYRFPINGRPSAFFRGDWYVGKSVSVTLLKPTSSSSNALAILNSHMHAPYAQSG 166 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + Y + + A+ + ++ GD N P ++ Sbjct: 167 DAAYYCHRSCQAWDMSQMANLYKKAGYAVVIVGDLNSKPGTLPHKFLTKETGFVDSWEQL 226 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 ++ ++ S + + ++ R+D+ ++ P L + Sbjct: 227 HGKQDLVRISKLDPLLQIKQGGTTCDSILNTWRSMRRPDEACRLDYALVDPSRLQTLEAC 286 Query: 240 RIDTKPRGWTK------PSDH 254 R + SDH Sbjct: 287 -----VRFTERIPEIGSFSDH 302 >gi|255264183|ref|ZP_05343525.1| endonuclease/exonuclease/phosphatase [Thalassiobium sp. R2A62] gi|255106518|gb|EET49192.1| endonuclease/exonuclease/phosphatase [Thalassiobium sp. R2A62] Length = 341 Score = 42.5 bits (98), Expect = 0.068, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 12/53 (22%) Query: 223 IDHIMLSPEATSLLHSARI-----------DTKPRG-WTKPSDHTPVIVSLDI 263 +D+IM+SP+ L S I D + R SDH PV + +++ Sbjct: 289 LDYIMVSPDLAELAPSWHIWHPFEDPACWGDVELRDALLTASDHFPVTLDIEL 341 >gi|242763345|ref|XP_002340557.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500] gi|218723753|gb|EED23170.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500] Length = 924 Score = 42.5 bits (98), Expect = 0.068, Method: Composition-based stats. Identities = 39/251 (15%), Positives = 69/251 (27%), Gaps = 27/251 (10%) Query: 28 NNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDD 87 N DI+ +QE P+ + + T IL + P E P Sbjct: 10 QNYDILAIQE--------PY--INKYTNPLTTYSLALKGSFHILLQPTPKEEYKKRPQVC 59 Query: 88 LDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEP 147 V AT+ + + L L T ++ + L+ Sbjct: 60 FYVNRGLDPATWEVQYHNRDLSTLTLHTAAHGTIHIHNVYNPGVNSNEESVINTLQTTMA 119 Query: 148 LIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF 207 +I+ + Y+P+ E L + + + + Sbjct: 120 P---RTQHIVLGDFNRYHPLWAGPRYRHVDEEATKLINLIDEHRLEQLLPPGTITYE--- 173 Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPR 267 ++ S I+ + S + + S DTKP W DH P+ D+ R Sbjct: 174 ---RVNAKST-----INLVWASHNLANWVVSC--DTKPEWWYGA-DHVPISTQFDLTAVR 222 Query: 268 KKQQDSTSQNM 278 N Sbjct: 223 VPPMVRKQWNA 233 >gi|254780797|ref|YP_003065210.1| hypothetical protein CLIBASIA_03440 [Candidatus Liberibacter asiaticus str. psy62] gi|254040474|gb|ACT57270.1| hypothetical protein CLIBASIA_03440 [Candidatus Liberibacter asiaticus str. psy62] Length = 231 Score = 42.5 bits (98), Expect = 0.068, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 16/51 (31%) Query: 4 VTVATWNVNSI----------RARIH------NLAAWIKENNPDIICLQET 38 + +A+WN+N++ + I L + ++ + DI+CLQE Sbjct: 7 IRIASWNINNLSEKSGVALFKNSVIREDNDYALLQKYAEQLDADIVCLQEI 57 >gi|270307561|ref|YP_003329619.1| endonuclease/exonuclease/phosphatase family [Dehalococcoides sp. VS] gi|270153453|gb|ACZ61291.1| endonuclease/exonuclease/phosphatase family [Dehalococcoides sp. VS] Length = 639 Score = 42.5 bits (98), Expect = 0.068, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 19/41 (46%), Gaps = 5/41 (12%) Query: 3 VVTVATWNV-NSI----RARIHNLAAWIKENNPDIICLQET 38 + + T+N+ N R + L I+ + D++ LQE Sbjct: 411 TLRIMTYNLHNGFNTQGRLDMEALVRVIENSGADVVALQEI 451 Score = 40.9 bits (94), Expect = 0.18, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 7/43 (16%) Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 RID+I SP+ + S I + SDH VI + + Sbjct: 604 RIDYIWASPDIV-YVDSFTIFS------LASDHLAVIADIRLS 639 >gi|322386957|ref|ZP_08060581.1| RgfB protein [Streptococcus cristatus ATCC 51100] gi|321269239|gb|EFX52175.1| RgfB protein [Streptococcus cristatus ATCC 51100] Length = 271 Score = 42.5 bits (98), Expect = 0.069, Method: Composition-based stats. Identities = 31/246 (12%), Positives = 69/246 (28%), Gaps = 9/246 (3%) Query: 16 ARIHNLAAWIKENNPDIICLQETK--TEDKNFPFETLQSL-----NYHIETCGQKSYNGV 68 ++++ LA I + D+ICLQE E + H + + + Sbjct: 19 SKLNQLAERILQEKYDVICLQEVNQLVESEQVVQAPFYYAVDGAIPIHQDHYALRLVEKL 78 Query: 69 AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKI 128 A + G D+ + I + + + L + ++ P + Sbjct: 79 AEAGLDYYWSWAYNHIGFDIYNEGVAILSRKPLKARELLVSDVNDPSDYHTRKVLLAETE 138 Query: 129 SWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN 188 + + ++ ++ + Sbjct: 139 LDGRLITVASCHLSWWDKGFQGEWAKFESELLQVETPLVLMGDFNNPVDYEGYQHILQSP 198 Query: 189 MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGW 248 + D+ + T + A ++ID+I S + ++ SA + RG Sbjct: 199 LALQDSHKVAVQTIGAATVEGDIAGWAGNKDALKIDYIFTSKDF-NVERSAVVFDGQRGP 257 Query: 249 TKPSDH 254 SDH Sbjct: 258 VV-SDH 262 >gi|90425348|ref|YP_533718.1| endonuclease/exonuclease/phosphatase [Rhodopseudomonas palustris BisB18] gi|90107362|gb|ABD89399.1| Endonuclease/exonuclease/phosphatase [Rhodopseudomonas palustris BisB18] Length = 328 Score = 42.5 bits (98), Expect = 0.069, Method: Composition-based stats. Identities = 34/289 (11%), Positives = 74/289 (25%), Gaps = 39/289 (13%) Query: 1 MSVVTVATWNVNSI----------RARIHNLAAWIKENNPDIICLQET-KTEDKNFPFET 49 M + V + N + R R L+ I + + D++ LQE + + E Sbjct: 46 MGTLRVGSLNT-GLSVWKIDLQQWRLRAAQLSKLIGDLSLDVVLLQEIWRIKWDETTDEM 104 Query: 50 ---LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 L L G ++ + V + ++ + L + Sbjct: 105 KTFLTGLG----LSGDQNKDDVLAAALGSGFQVRSSLVPSFDRGRREPGLYWGLTIVSRF 160 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 I + + ++ K L + + L Sbjct: 161 PIEQVEKKELSYSKFDRWPRIAQSGKIKLANGDSSIFVNVHLPA----ESHESRLGLGLE 216 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI----- 221 + + + + + +S + N+ Sbjct: 217 TLSFSRSLGAPTLCIGGDMNAGPQAGPVQIFMTEYSDCWSSGSTRVVKFEGNESRAGSAL 276 Query: 222 -------RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTP-VIVSLD 262 RID+++ + + S+ G SDH P VI ++ Sbjct: 277 YRTVAEGRIDYLLADK--MARITSSTYLYGDYGSAPLSDH-PFVIAEIE 322 >gi|147842050|emb|CAN75859.1| hypothetical protein VITISV_014707 [Vitis vinifera] Length = 1407 Score = 42.5 bits (98), Expect = 0.069, Method: Composition-based stats. Identities = 12/61 (19%), Positives = 22/61 (36%), Gaps = 9/61 (14%) Query: 201 THHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 Y++ N+ R+D +++ S+ I R SDH PV++ Sbjct: 580 QGGDYTW-----SGGPNNRYWARLDRFLVTSCWIDQF-SSVIQK--RLSRPASDHFPVVL 631 Query: 260 S 260 Sbjct: 632 E 632 >gi|288942589|ref|YP_003444829.1| endonuclease/exonuclease/phosphatase [Allochromatium vinosum DSM 180] gi|288897961|gb|ADC63797.1| Endonuclease/exonuclease/phosphatase [Allochromatium vinosum DSM 180] Length = 255 Score = 42.5 bits (98), Expect = 0.070, Method: Composition-based stats. Identities = 28/249 (11%), Positives = 59/249 (23%), Gaps = 45/249 (18%) Query: 16 ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75 ARI L D++ LQE + + + Y + + Sbjct: 42 ARIAQLLR-----QFDVVGLQEV--DAGSLRSSYVDQTQYLATQGAFPHWYRQINRNLAP 94 Query: 76 PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135 + L + + + + L G + Sbjct: 95 FAQHSNGLLARPRPACITEHRL-PGLPGRGVVVAEFALDDGEVLAIGI------------ 141 Query: 136 RFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAI 195 L + + + + K + Sbjct: 142 ----------VHLALGWNARRLQLDYLSRLAQTYPYLVLMGDFNCGCNSKGLRNMVRRSG 191 Query: 196 RATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHT 255 D +F + N +DHI++S + +AR+ SDH Sbjct: 192 MRGLDCELK-TFPSWRPRH---N----LDHILVSRPIE--VVAARVLDYAL-----SDHL 236 Query: 256 PVIVSLDIP 264 P+ + +++P Sbjct: 237 PISMRIELP 245 >gi|163119479|ref|YP_079289.2| hypothetical protein BL01872 [Bacillus licheniformis ATCC 14580] gi|145902986|gb|AAU23651.2| hypothetical protein BL01872 [Bacillus licheniformis ATCC 14580] Length = 241 Score = 42.5 bits (98), Expect = 0.070, Method: Composition-based stats. Identities = 40/261 (15%), Positives = 77/261 (29%), Gaps = 33/261 (12%) Query: 4 VT--VATWNVNSIRARIHNL-----AAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56 + + T+N++ + R + A I ++ DII L E D++F Sbjct: 1 MKFSIMTFNIHHGKGRDRRVDLGRTAGVIAQSGCDIIGLNEV---DRHFSN--------R 49 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 + Q + Y ++ GD + + + R + G Sbjct: 50 SDYEDQIGRLAEQLNMHYAYCPSLSLSSGDSSEKRQYGNALLTRFPIKKERHHSFNFVKG 109 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + + + R R L L L +I + + P+I D Sbjct: 110 LIEGRSLLEADVRIGDRLFRVFVTHLSLNPWLHGKQTDFLIEKVQESDLPVIVTGDFNMK 169 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 R + + + ++ + R+D+I LSP + Sbjct: 170 PYSRGWKKVAEKLADLWDESQY---GQGFTHPSHRPR-------RRLDYIFLSPSF--HV 217 Query: 237 HSARIDTKPRGWTKPSDHTPV 257 +A I SDH P+ Sbjct: 218 SAAEI---VAVDPNASDHLPL 235 >gi|15675775|ref|NP_269949.1| hypothetical protein SPy_1985 [Streptococcus pyogenes M1 GAS] gi|71911504|ref|YP_283054.1| exodeoxyribonuclease III [Streptococcus pyogenes MGAS5005] gi|13622999|gb|AAK34670.1| hypothetical protein SPy_1985 [Streptococcus pyogenes M1 GAS] gi|71854286|gb|AAZ52309.1| exodeoxyribonuclease III [Streptococcus pyogenes MGAS5005] Length = 272 Score = 42.5 bits (98), Expect = 0.070, Method: Composition-based stats. Identities = 36/274 (13%), Positives = 85/274 (31%), Gaps = 20/274 (7%) Query: 3 VVTVATWNVNSIRAR--IHNLAAW---IKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57 + V T N +S + L A I DIICLQE ++ E L + Sbjct: 1 MTKVLTLNTHSWMQANTLKKLVALAEHILAEKYDIICLQEI---NQLIESELATDLPRYQ 57 Query: 58 E-----TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 + + + + I + + + + E ++ Q + + ++ Sbjct: 58 ALSGTPSIHKDHFALLLIHYLQKRGQHYYWSWAYNHIGYDIYQEGVAILSKQPIHVSDIL 117 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLI---FAGDYNIIPQPHDCYNPIIW 169 + + T + + + F G++ + + N + Sbjct: 118 VSAMDDETDYHTRRSLIAKTTLDGKEVAVVNVHLSWFDKGFLGEWEKLEKELLTLNCPLL 177 Query: 170 ENDACFTLEVRQSFQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227 + +Q + + D+ + +S + +++DH+ Sbjct: 178 LMGDFNNPTDQDGYQVMMGSPLDLQDSHKGADHVFGDHSIVADIDGWQGNKEALKVDHVF 237 Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 S + + S++I + SDH + V+L Sbjct: 238 TSKDFI--IRSSKITFEGGDAPVVSDHYGLEVTL 269 >gi|241949399|ref|XP_002417422.1| CCR4-NOT complex subunit, putative; carbon catabolite repressor protein 4, putative; cytoplasmic deadenylase, putative; glucose-repressible alcohol dehydrogenase transcriptional effector, putative [Candida dubliniensis CD36] gi|223640760|emb|CAX45074.1| CCR4-NOT complex subunit, putative [Candida dubliniensis CD36] Length = 784 Score = 42.5 bits (98), Expect = 0.070, Method: Composition-based stats. Identities = 38/287 (13%), Positives = 69/287 (24%), Gaps = 53/287 (18%) Query: 31 DIICLQE--TKTEDK-NFPFETLQSL-NYHI----------------------------- 57 DIIC+QE TKT ++ P T Y Sbjct: 498 DIICMQEVETKTFNEFWLPVMTANGYKGYFFSKTRSKTMNEADSKKVDGCATFFKNDKFS 557 Query: 58 -ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 YN V + S + D A + + + + N +L Sbjct: 558 LVHKQNFEYNSVCMGSDKYKKTKDLFNRFMNKDNIALISYLQHKESGEKIAVVNTHLHWD 617 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 K ++ + I+ + Sbjct: 618 PAFNDVKALQVGILLEELQGIIKKYRHTNSNEDIKNSSIIVCGDFNSVKDSAVYQLFSTG 677 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSF-------WDYYADSWSKNKGIRIDHIMLS 229 ++ G H ++ + +++ N ID+I S Sbjct: 678 ASKGHEDMNGRDYGKFTEEGFHHPFKLKSAYETVGELPFTNLTPAFTDN----IDYIWYS 733 Query: 230 -PEATSLLHSARIDTKPRG-------WTKPSDHTPVIVSLDIPEPRK 268 P R+D + PSDH P++ + + +K Sbjct: 734 TPTLQVKGLLGRVDEEYTSHSIGFPDANFPSDHVPILAKFHLKKGKK 780 >gi|224109796|ref|XP_002333199.1| predicted protein [Populus trichocarpa] gi|222835077|gb|EEE73526.1| predicted protein [Populus trichocarpa] Length = 439 Score = 42.5 bits (98), Expect = 0.070, Method: Composition-based stats. Identities = 44/279 (15%), Positives = 77/279 (27%), Gaps = 45/279 (16%) Query: 6 VATWNVNSI--RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + WNV + R + L ++ + I+ + ETK E N F + H Sbjct: 97 IIVWNVCGLGGREKKRCLRNLGRKFDLHILGILETKLETLN-DFTIIAIWGRHPRAWYAV 155 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 G++ + + + + R + T N L ++ N Sbjct: 156 PSLGLSGGILCIWNPDLFCVSSCSVAMNGRILHIEGTFNRSNLDCLVSFVYAPNGGNLKN 215 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFA-GDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 R L + D Q D C +E+ Sbjct: 216 ELWTYLVTFRDSVSKPWCLAGDFNETLFPSDRKGGSQITSSMTRFKNCIDGCNLMELPL- 274 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 +++ ++ RID I +S + S+ Sbjct: 275 ------------------NGRKFTW--SRGNA-----ASRIDRIFVSGDWLQTFPSST-- 307 Query: 243 TKPRGWTKPS-DHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 G +K S DH P+ + LD ST+ KP Sbjct: 308 --LFGLSKYSYDHRPLHLLLD----------STNWGPKP 334 >gi|117167885|gb|AAI24748.1| Si:ch211-181h6.2 protein [Danio rerio] Length = 569 Score = 42.5 bits (98), Expect = 0.070, Method: Composition-based stats. Identities = 15/99 (15%), Positives = 33/99 (33%), Gaps = 5/99 (5%) Query: 15 RARIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAIL 71 R R N+ +++ + DI+CLQE ++ ++ + L+SL YH E + Sbjct: 230 RNRFPNIIKELEQYSADIMCLQEV--QEDHYKQQIKPSLESLGYHCEFKRRTGLKPDGCA 287 Query: 72 SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 ++ + + + Sbjct: 288 VIFKRERFSLVSCHPVEYFRRGVPLMDRDNVGLIVLLRP 326 >gi|320104403|ref|YP_004179994.1| endonuclease/exonuclease/phosphatase [Isosphaera pallida ATCC 43644] gi|319751685|gb|ADV63445.1| Endonuclease/exonuclease/phosphatase [Isosphaera pallida ATCC 43644] Length = 356 Score = 42.5 bits (98), Expect = 0.071, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 22/44 (50%), Gaps = 6/44 (13%) Query: 4 VTVATWNVNSI------RARIHNLAAWIKENNPDIICLQETKTE 41 + + TWN +++ + R + + E PD+I LQE ++ Sbjct: 56 IRIVTWNCDALFTTDEVKRRKSDFINMVAEVQPDVILLQEVTSQ 99 >gi|255073017|ref|XP_002500183.1| predicted protein [Micromonas sp. RCC299] gi|226515445|gb|ACO61441.1| predicted protein [Micromonas sp. RCC299] Length = 590 Score = 42.5 bits (98), Expect = 0.071, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 6/54 (11%) Query: 7 ATWNVNSIRARIHNLAAWIKENNPDIICLQETKTED-KNFPFETLQSLNYHIET 59 +WN R N+ I ++ DI+CLQE +++ ++F L Y Sbjct: 262 LSWN-----YRRQNILKEIVMHDADILCLQEVQSDHFEDFFAGELAKAGYTAVY 310 >gi|257052454|ref|YP_003130287.1| Endonuclease/exonuclease/phosphatase [Halorhabdus utahensis DSM 12940] gi|256691217|gb|ACV11554.1| Endonuclease/exonuclease/phosphatase [Halorhabdus utahensis DSM 12940] Length = 260 Score = 42.5 bits (98), Expect = 0.072, Method: Composition-based stats. Identities = 29/247 (11%), Positives = 67/247 (27%), Gaps = 13/247 (5%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQP 76 R +++ I+ + PD++ LQE D + ++ G+ + Sbjct: 20 RREAVSSTIRFHAPDVVGLQE--PLDHQLADVADRLPSFEWIGSGRVDGESEGEHTPIGY 77 Query: 77 IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 D + E ++ + + + Sbjct: 78 RTDRIEYVDGDTFWLSEAPEEPGSVGWDARYPRIVTWARLRDRRTDATLLFANTHFSHDG 137 Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIR 196 ++R L D + + + + + + + Sbjct: 138 PRARRKSAHLLLDRLADLRDDEPVVLTGDFNCVAGEEPYEILTGEDSPLALSGEQERSAE 197 Query: 197 ATHDTHHLYSFWDYYADSWSKNKGIR-IDHIMLSPEATSLLHSARIDTKPRGWTK-PSDH 254 H + + R IDH+ +P+ T + + + + + PSDH Sbjct: 198 PAHGPPTSVT-------DFENLVPNRKIDHVFTTPDVT--VGTHGVCSDVYDDGRFPSDH 248 Query: 255 TPVIVSL 261 PV+V L Sbjct: 249 LPVLVEL 255 >gi|320547790|ref|ZP_08042074.1| RgfB protein [Streptococcus equinus ATCC 9812] gi|320447550|gb|EFW88309.1| RgfB protein [Streptococcus equinus ATCC 9812] Length = 271 Score = 42.5 bits (98), Expect = 0.072, Method: Composition-based stats. Identities = 48/278 (17%), Positives = 86/278 (30%), Gaps = 30/278 (10%) Query: 5 TVATWNVNS-IRA-RIHNLAAWIK---ENNPDIICLQ---------ETKTED--KNFPFE 48 T N +S + A + L + + D+ICLQ ETK + +N P Sbjct: 3 KFLTLNTHSWLEANALKKLFDLAETIYSEDYDVICLQEINQDIRGLETKEVEGYENLPGS 62 Query: 49 -TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107 L NY ++ G + I + + + ++ I + Sbjct: 63 PALHRDNYALQLVNYLKSQGRHYYWSWAYNHIGYDKYNEGVVILSKKPIKVQDILVSEVD 122 Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167 + + T+ D K + + E + P+P Sbjct: 123 DEHDFHTRRVLAAETEVDGKTITVVSLHMSWYGKGFESEWAKLEKALSDYPKPLVLMGDF 182 Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK-GIRIDHI 226 D + QS LQ+ + T D W NK +++DH+ Sbjct: 183 NNPTDTAGYEMILQSPLDLQDSHKVAKVIQGDHTIIE------DIDGWEGNKQSLKVDHV 236 Query: 227 MLSPEATSLLHSARIDTKPRGWTKP--SDHTPVIVSLD 262 S + + S+++ G P SDH + V L+ Sbjct: 237 FTSKDID--IQSSKVVFD--GGESPIVSDHFGLAVELN 270 >gi|255025182|ref|ZP_05297168.1| endonuclease/exonuclease/phosphatase family protein [Listeria monocytogenes FSL J2-003] Length = 256 Score = 42.5 bits (98), Expect = 0.072, Method: Composition-based stats. Identities = 36/271 (13%), Positives = 71/271 (26%), Gaps = 26/271 (9%) Query: 3 VVTVATWNVN---------SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + +V T+N+ S R + + + D + ++E + + + Sbjct: 1 MFSVTTFNIRFDDTSERKKSWELRKTLTKSLLDKYQWDFMGVEE-PLLPQMLDMKAMLDW 59 Query: 54 NYH-IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 +Y + + + L T + + + Sbjct: 60 DYFGVGRDDGLEKGEFTAVFYNSTRFTLLQEGHFWLSDTPDVPSIHSTAMFPRICVWGKF 119 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 + FASQ L + +I II + N Sbjct: 120 ADSDGKQFYIFNTHLDHISEEARLFASQLLLKKAAIIAENSPVIILGDFNTQPNTPTYNY 179 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 + Q + G T + H +N+ +ID+I +S E Sbjct: 180 ITEKYQDAQLISQKPAKGPTGSFHDFHPL-------------RPENELEKIDYIFVSNEF 226 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + + SDH PV +LD Sbjct: 227 --QVSTYETIVDEVDGFSASDHFPVTANLDW 255 >gi|139474462|ref|YP_001129178.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pyogenes str. Manfredo] gi|134272709|emb|CAM30981.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus pyogenes str. Manfredo] Length = 272 Score = 42.5 bits (98), Expect = 0.072, Method: Composition-based stats. Identities = 37/276 (13%), Positives = 86/276 (31%), Gaps = 20/276 (7%) Query: 3 VVTVATWNVNSIRAR--IHNLAAW---IKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57 + V T N +S + L A I DIICLQE ++ E L + Sbjct: 1 MTKVLTLNTHSWMQANTLKKLVALAEHILAEKYDIICLQEI---NQLIESELATDLPRYQ 57 Query: 58 E-----TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 + + + + I + + + + E ++ Q + + ++ Sbjct: 58 ALSGTPSIHKDHFALLLIHYLQKRGQHYYWSWAYNHIGYDIYHEGVAILSKQPIHVSDIL 117 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLI---FAGDYNIIPQPHDCYNPIIW 169 + T+ + R + + F G++ + + N + Sbjct: 118 VSAMADETNYHTRRSLIAKTRLDGKEVAVVNVHLSWFDKGFLGEWEKLEKELLTLNCPLL 177 Query: 170 ENDACFTLEVRQSFQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227 + +Q + + D+ + +S + +++DH+ Sbjct: 178 LMGDFNNPTDQDGYQVMMGSPLDLQDSHKVADHVFGDHSIVADIDGWQGNKEALKVDHVF 237 Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 S + + S++ + SDH + V+LD Sbjct: 238 TSKDFI--IRSSKTTFEGGDAPVVSDHYGLEVTLDW 271 >gi|315644659|ref|ZP_07897790.1| 5'-Nucleotidase domain protein [Paenibacillus vortex V453] gi|315279918|gb|EFU43217.1| 5'-Nucleotidase domain protein [Paenibacillus vortex V453] Length = 2086 Score = 42.5 bits (98), Expect = 0.073, Method: Composition-based stats. Identities = 15/67 (22%), Positives = 26/67 (38%), Gaps = 10/67 (14%) Query: 200 DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID---TKPRGWTKPSDHTP 256 Y++ Y +S +DHI++S T + P + SDH P Sbjct: 1076 PLKEQYTY-TYDGNSQV------LDHILVSKNLTRSTQVDVVHLNADFPASKGRVSDHDP 1128 Query: 257 VIVSLDI 263 V+ +D+ Sbjct: 1129 VVAQIDL 1135 >gi|281424056|ref|ZP_06254969.1| endonuclease/Exonuclease/phosphatase family protein [Prevotella oris F0302] gi|281401839|gb|EFB32670.1| endonuclease/Exonuclease/phosphatase family protein [Prevotella oris F0302] Length = 313 Score = 42.5 bits (98), Expect = 0.073, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 22/61 (36%), Gaps = 21/61 (34%) Query: 223 IDHIMLSPEATSLLHSARI--------DTKPRGWTKP-------------SDHTPVIVSL 261 +DH++ S L S I D + G +P SDH P++V Sbjct: 252 LDHVLCSEALVPLFRSCTIADFPFLLTDDEVYGGLQPLRNFHGAKYLNGFSDHLPLVVKF 311 Query: 262 D 262 D Sbjct: 312 D 312 >gi|325922580|ref|ZP_08184334.1| metal-dependent hydrolase [Xanthomonas gardneri ATCC 19865] gi|325546930|gb|EGD18030.1| metal-dependent hydrolase [Xanthomonas gardneri ATCC 19865] Length = 255 Score = 42.5 bits (98), Expect = 0.073, Method: Composition-based stats. Identities = 16/95 (16%), Positives = 31/95 (32%), Gaps = 14/95 (14%) Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 +A + + + R + +++F + D IDHI++S Sbjct: 170 HPNAMLMGDFNCMADRPEMQALYRHTRLQPPSCEVHTFPSWRPD-------RAIDHILVS 222 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 T I+ SDH V + + +P Sbjct: 223 DSLT-------IERIEAIPAAFSDHLAVGMDIRVP 250 >gi|260584082|ref|ZP_05851830.1| RgfB protein [Granulicatella elegans ATCC 700633] gi|260158708|gb|EEW93776.1| RgfB protein [Granulicatella elegans ATCC 700633] Length = 271 Score = 42.5 bits (98), Expect = 0.073, Method: Composition-based stats. Identities = 33/277 (11%), Positives = 75/277 (27%), Gaps = 24/277 (8%) Query: 4 VTVATWNVNSI--RARIHNL----AAWIKENNPDIICLQET---------KTED--KNFP 46 + T N +S + + + N D+IC QE K +D K P Sbjct: 1 MKFLTLNTHSWMEKEAEEKFNLLLQDILDK-NYDLICFQEVNQEITLPEVKVDDYYKALP 59 Query: 47 FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 H + + +A + + G D + I + I + + Sbjct: 60 SAEPI----HQDHYVRLLLEKLAESGRNYYWTWSYNHIGYDRYHEGVAILSKTPIEAREV 115 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 + ++ P + + K + ++ Sbjct: 116 LVSDVDDPTDYHTRRVALAETVVDGKELAVASVHLSWWDKGFQEEWARFETVLKTLNKPL 175 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226 ++ + + +G DA + Y+ + +RID++ Sbjct: 176 LLAGDFNNPAGQEGYQAILASPLGLQDAFEVAKEKSGSYTVPPEIDGWKGNTEPLRIDYV 235 Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + E + + + + SDH + L+ Sbjct: 236 FTTKELE--IENLHVVFDGNHSPQVSDHFGLNAQLNW 270 >gi|261879847|ref|ZP_06006274.1| endonuclease/exonuclease/phosphatase family protein [Prevotella bergensis DSM 17361] gi|270333506|gb|EFA44292.1| endonuclease/exonuclease/phosphatase family protein [Prevotella bergensis DSM 17361] Length = 321 Score = 42.5 bits (98), Expect = 0.074, Method: Composition-based stats. Identities = 28/260 (10%), Positives = 60/260 (23%), Gaps = 44/260 (16%) Query: 30 PDIICLQETKTEDKNFPFET-----LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLP 84 PD++ L E E+ + + L++ Y G+ + Y P Sbjct: 72 PDLVALTEV--ENDSVVHDLTKRSLLKNAGYEYVVTDSPDQRGIDVALLYLPSS-----F 124 Query: 85 GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL 144 R T+ + + G+ + + Sbjct: 125 RLLSSRSIRIPPFRHFRPTRDILCASGATASGDTLHVFVVHAPSRSAGEKATRPYRMHVA 184 Query: 145 EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL 204 + + + + L+++ R H Sbjct: 185 RQLYGAIDSLRALYAQPGIIVMGDFNDYTGNASIQFLLSGGLRDVS--AEARGGHGAKGT 242 Query: 205 YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKP------------------- 245 Y + + +DHI+ + + I+ P Sbjct: 243 YRYHSDWGS---------LDHILCDEHTAACVVKCSINDAPFLLENEQKYGGVKPRRTYL 293 Query: 246 --RGWTKPSDHTPVIVSLDI 263 R SDH P++ D+ Sbjct: 294 GPRYLGGFSDHLPLVAVFDL 313 >gi|261856796|ref|YP_003264079.1| endonuclease/exonuclease/phosphatase [Halothiobacillus neapolitanus c2] gi|261837265|gb|ACX97032.1| Endonuclease/exonuclease/phosphatase [Halothiobacillus neapolitanus c2] Length = 243 Score = 42.5 bits (98), Expect = 0.075, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 7/64 (10%) Query: 3 VVTVATWNVN-SI----RARIHNLAAWIKENNPDIICLQETKTED--KNFPFETLQSLNY 55 ++TVATWN++ I R + + I+ + D+I LQE D + Q+ Y Sbjct: 2 ILTVATWNIHAGIGRDRRLDLARIWRVIELIDADLIGLQEVVLTDLHDDLLIRWAQAAGY 61 Query: 56 HIET 59 Sbjct: 62 ATHF 65 >gi|147802057|emb|CAN74986.1| hypothetical protein VITISV_008771 [Vitis vinifera] Length = 1971 Score = 42.5 bits (98), Expect = 0.075, Method: Composition-based stats. Identities = 21/167 (12%), Positives = 52/167 (31%), Gaps = 7/167 (4%) Query: 94 FIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGD 153 + + + +G + ++ S + + L EE Sbjct: 377 VFWDKRVLELEGMEVGLFSISCRFKNCEDGFNWVFSGVYGPTLKRYRELFWEELRAIRRL 436 Query: 154 YNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD 213 ++ +N I + N++ + S ++ + +R +++ + Sbjct: 437 WSDPWCIGGDFNLIRFPNESRRGGRLSSSMRRFSEVIDDLDLRDLPLQGGPFTW----SG 492 Query: 214 SWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 + RID ++S + T PR SDH P+++ Sbjct: 493 GLNNQAMTRIDRFLVSEDWEGHFKGVVQCTLPR---PVSDHFPILLD 536 >gi|46094758|gb|AAS79823.1| putative exonuclease [Homo sapiens] Length = 204 Score = 42.5 bits (98), Expect = 0.077, Method: Composition-based stats. Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 2/37 (5%) Query: 4 VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQET 38 +++ NVN A + +A WI+ + P + CLQET Sbjct: 8 ISIVMLNVNGQNAPLKRYRMAEWIRIHQPSVCCLQET 44 >gi|254831846|ref|ZP_05236501.1| hypothetical protein Lmon1_10855 [Listeria monocytogenes 10403S] Length = 256 Score = 42.5 bits (98), Expect = 0.078, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 3/58 (5%) Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 SF D+ N+ +ID+I +S E + + SDH PV +LD Sbjct: 201 SFHDFRPL-RPINELEKIDYIFVSKEF--QVCTYETIVDEVDGFSASDHFPVTANLDW 255 >gi|147778389|emb|CAN69557.1| hypothetical protein VITISV_000928 [Vitis vinifera] Length = 648 Score = 42.5 bits (98), Expect = 0.078, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 23/57 (40%), Gaps = 11/57 (19%) Query: 211 YADSWSKNKGI------RIDHIMLSPEATSLLHSARIDTKPRGWTKP-SDHTPVIVS 260 +++ N G+ R+D ++SP R +P SDH P+++ Sbjct: 549 QGGAFTWNGGLNNVSRARLDRFLVSPCWLDQFSRVS----QRRLPRPISDHFPILLE 601 >gi|328709897|ref|XP_003244099.1| PREDICTED: nocturnin-like isoform 2 [Acyrthosiphon pisum] gi|328709899|ref|XP_001951703.2| PREDICTED: nocturnin-like isoform 1 [Acyrthosiphon pisum] Length = 417 Score = 42.1 bits (97), Expect = 0.080, Method: Composition-based stats. Identities = 34/249 (13%), Positives = 63/249 (25%), Gaps = 15/249 (6%) Query: 20 NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEI 79 ++ I ++NPDIICLQE +F F + ++L + + Sbjct: 166 HMLEEILKHNPDIICLQEV----DHFDFLS-RALATQSYSGLFVPKPDSPCVYINDNNGP 220 Query: 80 VTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFAS 139 D + + T+ + L + + Sbjct: 221 DGCAIFYKNDKFDLLEKHDKVLQVWTVHSNQVSLLLV-LKDKSTQKELCVSTTHLKARKG 279 Query: 140 QRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH 199 L I I+ + E S + D+ Sbjct: 280 ALLSTLRNEQGKDLLQFISSHAADRPTIVCGDFNAEPTEPVYSTMCSCSYLPLDSAYKLS 339 Query: 200 DTHHLYSFWDYYADSWSKNKGIRIDHIMLSP------EATSLLHSARI-DTKPRGWTKPS 252 + LY+ W ID++ + + I + + T PS Sbjct: 340 GSEPLYTSWKIRGGEGEVMHT--IDYMFYTKHKLTVSNILDMPKEIDIGENRVPSMTYPS 397 Query: 253 DHTPVIVSL 261 DH +I Sbjct: 398 DHFSLISDF 406 >gi|283833916|ref|ZP_06353657.1| endonuclease/exonuclease/phosphatase family protein [Citrobacter youngae ATCC 29220] gi|291070588|gb|EFE08697.1| endonuclease/exonuclease/phosphatase family protein [Citrobacter youngae ATCC 29220] Length = 253 Score = 42.1 bits (97), Expect = 0.080, Method: Composition-based stats. Identities = 27/251 (10%), Positives = 59/251 (23%), Gaps = 26/251 (10%) Query: 15 RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKY 74 R + L ++ DI+CLQE + H+E ++ + + Sbjct: 27 RFILPELREAVRTVGADIVCLQEV--------LGAHEVHPLHVENWPDTTHYEFLADTMW 78 Query: 75 QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDK--ISWIK 132 + + + + + + Sbjct: 79 SDFAYGRNAVYPQGHHGNAVLSRYPIEHFENRDVSVGASEKRGVLYCRIVPPMLSHPVHV 138 Query: 133 RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192 + + + L D+ + ND + N Sbjct: 139 MCVHLGLREAHRQAQLAMLADWVNALPEGEPVVVAGDFNDWRQK----ANHPLKANADLD 194 Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPS 252 + H +F + +R+D I + S + R W S Sbjct: 195 EIFTRAHGRPAR-TFPVQFPL-------LRLDRIYVKNANASTPTA----LALRHWRHLS 242 Query: 253 DHTPVIVSLDI 263 DH P+ + + Sbjct: 243 DHAPLSAEIHL 253 >gi|77554244|gb|ABA97040.1| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 1913 Score = 42.1 bits (97), Expect = 0.080, Method: Composition-based stats. Identities = 32/269 (11%), Positives = 80/269 (29%), Gaps = 32/269 (11%) Query: 16 ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75 A + +L A +KE N ++ L ET+ + + + K Sbjct: 616 AAVRDLIALVKEANSQVVFLSETR------------------QKIERIRRLRSRLGLKGF 657 Query: 76 PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135 L G I + + L +P+ + ++ Sbjct: 658 VGCNSDGLSGGLALFWHESIFMDVKSVNERYVDAYMRLSPEDPLCHVTFVYGEPRVENRH 717 Query: 136 RFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAI 195 R S+ L+L++ +I + E + + +++ + Sbjct: 718 RLWSRLLDLKQSSPLPW---MIIGDFNETLWQFEHFSVSKRGEAQM--RAFRDVLQICEL 772 Query: 196 RATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHT 255 + Y++ D + S N +R+D + + ++++ + SDH Sbjct: 773 VDLGFSGVPYTY-DNRREGRS-NVKVRLDRALADNSWRDIYSNSQV---VHLTSSCSDHC 827 Query: 256 PVIVSLDIPEPRKKQQD----STSQNMKP 280 P+++ + ++ +P Sbjct: 828 PILLKFAADSRQSNRKKCFHYEICWEREP 856 >gi|319649900|ref|ZP_08004051.1| hypothetical protein HMPREF1013_00655 [Bacillus sp. 2_A_57_CT2] gi|317398480|gb|EFV79167.1| hypothetical protein HMPREF1013_00655 [Bacillus sp. 2_A_57_CT2] Length = 261 Score = 42.1 bits (97), Expect = 0.081, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 75/279 (26%), Gaps = 39/279 (13%) Query: 4 VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET----KTEDKNFPFETLQSLN 54 + + T N +S + +I LA IKEN D+I LQE K ++ N Sbjct: 1 MKLLTLNCHSWQEDQQLEKIKILAEAIKENLYDVIALQEVSQHIKAP---LIDGHIREDN 57 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 Y + + GV K + G D+ + I I Sbjct: 58 YALLLIEELRKIGV----KDYVFKWDFSHIGYDIYEEGLAIITRHEIKEDQSFFITKNRD 113 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII------PQPHDCYNPII 168 + T K+ + + F S L + + + P+ Sbjct: 114 QKHWKTRKIVGIKLLHQDKPISFYSCHLGWWHDQEESYRFQVESLLSKVPKDESAILMGD 173 Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD--SWSKNKG-IRIDH 225 + + A E + S W NK +RID Sbjct: 174 FNSSAYVRNEGYDFLTGNGLYDTYELASRKD------SGVTVRGKIAGWENNKHDMRIDL 227 Query: 226 IMLSPEATSLLHSA---RIDTKPRGWTKPSDHTPVIVSL 261 I+ + I SDH V + + Sbjct: 228 ILSAQPIQPKYSRVIFNGIHKPI-----ISDHYGVEIEI 261 >gi|302345504|ref|YP_003813857.1| endonuclease/exonuclease/phosphatase family protein [Prevotella melaninogenica ATCC 25845] gi|302149821|gb|ADK96083.1| endonuclease/exonuclease/phosphatase family protein [Prevotella melaninogenica ATCC 25845] Length = 258 Score = 42.1 bits (97), Expect = 0.082, Method: Composition-based stats. Identities = 34/217 (15%), Positives = 66/217 (30%), Gaps = 12/217 (5%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQP 76 R +L +I P+I QE + + + L S Y I + + Sbjct: 46 RCSHLCDFINFEQPEIFGTQEVLVDQLHDLMKGLDSYGY-IGVGRDDGKEKGEYAAIFYK 104 Query: 77 IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 ++ L + + A+ + +RI Y + + Sbjct: 105 KNQLSLLDSGNFWLSPTPERASLGWDAACIRICTWGKFQDKVSGKQFY-----FFNAHMD 159 Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIR 196 E + N + + + D + S + +T+A++ Sbjct: 160 HVGTVARRESARLILKRINQLSKGLPTILTGDFNVDQTDEIYQIFSNSGVLRDCYTNALQ 219 Query: 197 ATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 T ++ D+ DS SK RIDHI +S + Sbjct: 220 RMTPTG---TWNDFMQDSRSK---SRIDHIFVSSDFK 250 >gi|237747027|ref|ZP_04577507.1| endonuclease/exonuclease/phosphatase [Oxalobacter formigenes HOxBLS] gi|229378378|gb|EEO28469.1| endonuclease/exonuclease/phosphatase [Oxalobacter formigenes HOxBLS] Length = 264 Score = 42.1 bits (97), Expect = 0.082, Method: Composition-based stats. Identities = 43/279 (15%), Positives = 82/279 (29%), Gaps = 41/279 (14%) Query: 4 VTVATWNVN---SI--RARIHNLAAWIKENNPDIICLQETKTEDKNF---PFETLQSLNY 55 + +AT+N++ SI R I L I+ + D+I LQE + Q Sbjct: 3 LRIATYNIHKGASIDHRPVIQELKRSIRSLSADVIFLQEVQGRHDLMANRHALLWQDQGQ 62 Query: 56 HIE-------------TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN 102 H ++G A+LS Y + D + Sbjct: 63 HAYLAGSSLYCAYGKNAVYDYGHHGNALLSAYPIVSQYNTDVSDHALESRGILHCVLQTP 122 Query: 103 TQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD 162 + ++L N + I ++R + + + + + + + + Sbjct: 123 ETKVYCYVIHLGLFNGSRVRQTHALIDTVQRSAPNDAPVIIAGDFNDWNNNLSDLLRKTL 182 Query: 163 CYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR 222 + D E R+ + G L+ F+ R Sbjct: 183 RVKEVF---DEMAEREERKKSFFPRLTGKVPKPLPARTFPALFPFF-------------R 226 Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +D I + + + WT SDH P++ SL Sbjct: 227 LDRIYV----RGFQVDSACVMQGSPWTALSDHAPLVASL 261 >gi|147800480|emb|CAN68584.1| hypothetical protein VITISV_043904 [Vitis vinifera] Length = 1283 Score = 42.1 bits (97), Expect = 0.083, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 23/61 (37%), Gaps = 9/61 (14%) Query: 201 THHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 Y++ N+ R+D +++P S+ I R SDH PV++ Sbjct: 665 QGGGYTW-----SGGPNNQSWARLDRFLVTPCWLDQF-SSVIQK--RLSXPVSDHFPVLL 716 Query: 260 S 260 Sbjct: 717 E 717 >gi|254414082|ref|ZP_05027850.1| endonuclease/exonuclease/phosphatase family [Microcoleus chthonoplastes PCC 7420] gi|196179218|gb|EDX74214.1| endonuclease/exonuclease/phosphatase family [Microcoleus chthonoplastes PCC 7420] Length = 316 Score = 42.1 bits (97), Expect = 0.083, Method: Composition-based stats. Identities = 39/287 (13%), Positives = 70/287 (24%), Gaps = 38/287 (13%) Query: 2 SVVTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56 S + VA++NV S A ++ + DI E + E E + Sbjct: 34 SQLKVASFNVESGDAVPSVIARKHIGPL---EDIDIWGFSEVQNESWLLDLEQGTEDGEN 90 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 + G + R Sbjct: 91 ADFKTILGSTGRGDRLAIAYNSNLLEEVKHYELDDINIGGRVRAPLVAQFRFKPTGEEFL 150 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + + S ++ E P+I AGDYN + W+ Sbjct: 151 FVVNHLYRSSESSRHEQAQLLNEWGRSQELPIIAAGDYNFDWDVVSGVHDEGWDFLTADD 210 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 + KL +D + +D + ++ EA + Sbjct: 211 VFTWVKPDKLVATLCSDRYDSV------------------------LDFVFVAGEAKNWS 246 Query: 237 HSARIDTKPRGWTK------PSDHTPVIVSLDIPEPRKKQQDSTSQN 277 S+ I SDH P++ + + E + S Q Sbjct: 247 ASSVILYSEPSDAYCPDDKTTSDHRPILATFQLEELVEPTPPSREQR 293 >gi|326433914|gb|EGD79484.1| hypothetical protein PTSG_12983 [Salpingoeca sp. ATCC 50818] Length = 504 Score = 42.1 bits (97), Expect = 0.084, Method: Composition-based stats. Identities = 46/285 (16%), Positives = 84/285 (29%), Gaps = 47/285 (16%) Query: 17 RIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYH--------IETCGQKSYNG 67 R + + + DI+CLQE K+E + LQ YH ++ +G Sbjct: 223 RKGKILTELANSKCDILCLQEVSKSEFYQYFLGQLQKEGYHGAFKVKTRAAYQADETIDG 282 Query: 68 VAILSKYQPIEIVTHL--------------------PGDDLDVQARFIEATFTINTQTLR 107 A + +++ D A F + + + Sbjct: 283 CATFYSTKTYKMLYEHGIDLQQLSVANSNGCNTVIDRCMPKDNVALFTVFEHAVTKKRVF 342 Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC---Y 164 + NL+L + K + +K F + L+ P++ GD+N +P Sbjct: 343 VANLHLTWDPHFSDVKVVQIVLALKAIREFLQENKLLDVPVMLMGDFNSMPDSGVYEFLA 402 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRID 224 I N ++F +R+ + T Y+ + GI ID Sbjct: 403 TGKINPNHPDMQGYDYKAFFDSVGTTHPFKLRSAYTTEMQYT---NKTAGF---VGI-ID 455 Query: 225 HIMLSP-EATSLLHSARIDTKPRGWTKP-------SDHTPVIVSL 261 +I + +D SDH + L Sbjct: 456 YIWYTEGSLLPQAVWGPVDESYMDRVSGCPNPHFSSDHLALGAKL 500 >gi|156381859|ref|XP_001632273.1| predicted protein [Nematostella vectensis] gi|156219326|gb|EDO40210.1| predicted protein [Nematostella vectensis] Length = 215 Score = 42.1 bits (97), Expect = 0.085, Method: Composition-based stats. Identities = 18/99 (18%), Positives = 29/99 (29%), Gaps = 5/99 (5%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL---NYHIETCGQKSYNGVAILSK 73 R NL I N DI+CLQE E ++F L Y + + Sbjct: 31 RKKNLLKEILHCNADILCLQEV--ESEHFDNWFFPELCKAGYKGFYKKRTGKKSDGCATF 88 Query: 74 YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 Y+ L + + + + + Y Sbjct: 89 YKKSRFHHLLTQEVEFCRKDILVMDRDNVALIVVLRPRY 127 >gi|116198337|ref|XP_001224980.1| hypothetical protein CHGG_07324 [Chaetomium globosum CBS 148.51] gi|88178603|gb|EAQ86071.1| hypothetical protein CHGG_07324 [Chaetomium globosum CBS 148.51] Length = 261 Score = 42.1 bits (97), Expect = 0.085, Method: Composition-based stats. Identities = 30/251 (11%), Positives = 58/251 (23%), Gaps = 35/251 (13%) Query: 32 IICLQET-KTEDKNFPFETLQSLN--------------YHIETCG--QKSYNGVAILSKY 74 +CLQE ++ + S Y + Sbjct: 23 FVCLQEVLHSQLTDIQARLGPSWGRIGQGREDGKEAGEYSSIFFRADHWECDRSRTYWLS 82 Query: 75 QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRF 134 E+ + + + + + + H + + + + R Sbjct: 83 PTPEVSSKGWDAAFERVVTIGSFRHKRTGAVVVVMSTHFDHEGEVAREQSAHLLLKLART 142 Query: 135 LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDA 194 +L P+ F GD+N P + + K N T Sbjct: 143 W-CGEGAFDLSAPVFFGGDFNSTPTGRAYKVLTEPGIGMKDIFNILPADAKYGNEEITFT 201 Query: 195 IRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRG-WTKPSD 253 H RID + + + S I SD Sbjct: 202 SFGDDPNQHP----------------ARIDFLFVRDLGSLRFLSFSILPNRFDEGVYLSD 245 Query: 254 HTPVIVSLDIP 264 H PV+ +++ Sbjct: 246 HRPVVADVEVS 256 >gi|87308119|ref|ZP_01090261.1| putative endonuclease/exonuclease/phosphatase family protein [Blastopirellula marina DSM 3645] gi|87289201|gb|EAQ81093.1| putative endonuclease/exonuclease/phosphatase family protein [Blastopirellula marina DSM 3645] Length = 306 Score = 42.1 bits (97), Expect = 0.085, Method: Composition-based stats. Identities = 42/283 (14%), Positives = 74/283 (26%), Gaps = 41/283 (14%) Query: 16 ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI---------------ETC 60 +R LAA IK+ D+I +QE L +L + Sbjct: 26 SRHDELAAVIKQTQADVIGVQE-----DTSSDRLLTALGDNWRRAGSIYSKYPLTPISVD 80 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG---N 117 + V + S + + TH + Q + + G N Sbjct: 81 RLPTVCRVHLPSGDSIVIVNTHWRPGPYGPYDIQKDIRQNGAPQNFDLWEQQILDGCDKN 140 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + + + L + D+ + Sbjct: 141 HGARGYQETVDTIQSYVAAGETVILTGDFNEPSHLDWTKRAAEQGLDRWVENPTHVPLRF 200 Query: 178 EV-RQSFQKLQNMGFTDAIRATHDTHHL---YSF-WDYYAD--SWSKNKGI---RIDHIM 227 + + Q L+ G DA R ++ Y A N RID + Sbjct: 201 AIAWRGSQMLEQAGMRDAYRTAFPDEVEKPGLTWTPTYPAGTPGRHPNADRVLDRIDMVY 260 Query: 228 LSPEATSLLHSARIDTK-------PRGWTKPSDHTPVIVSLDI 263 + A ++ A + + PSDH V+V +I Sbjct: 261 FT-GANLRVNDAAVVGESAAFSEIVFPGEWPSDHRAVLVEFEI 302 >gi|242788658|ref|XP_002481265.1| hypothetical protein TSTA_040250 [Talaromyces stipitatus ATCC 10500] gi|218721412|gb|EED20831.1| hypothetical protein TSTA_040250 [Talaromyces stipitatus ATCC 10500] Length = 633 Score = 42.1 bits (97), Expect = 0.085, Method: Composition-based stats. Identities = 36/257 (14%), Positives = 68/257 (26%), Gaps = 19/257 (7%) Query: 26 KENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPG 85 + +I +QE + N SL + + N +K + + + Sbjct: 276 RALRASVIAIQEPWRNELNNTTHQPASLTHQLLYPKPNDNNDNTNNNKRARMALFVNKSI 335 Query: 86 DDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELE 145 + I + I + + N Y I R F EL Sbjct: 336 NPASWSHTVISPDYQIL--HIHYQRCLHSNSNSEPHDLYIHNIYNEPRSTTFTHIDRELT 393 Query: 146 EPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY 205 +I+ + + W E ++ + + L Sbjct: 394 RLGCSQTTAHIVLGDMN-AHHPAWGGPGTKIDEQATELLEIMDRHGIELAT----EEGLV 448 Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP-SDHTPVIVSLDIP 264 ++ S S ID LS L + + + SDH P+ + +DI Sbjct: 449 TW--ERGQSQST-----IDLTFLSTTLFHRL----VLHERADEIQHDSDHWPIRMQIDID 497 Query: 265 EPRKKQQDSTSQNMKPI 281 P + + I Sbjct: 498 TPTHEPPRRRNWAAIDI 514 >gi|150376190|ref|YP_001312786.1| endonuclease/exonuclease/phosphatase [Sinorhizobium medicae WSM419] gi|150030737|gb|ABR62853.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium medicae WSM419] Length = 242 Score = 42.1 bits (97), Expect = 0.085, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 22/43 (51%), Gaps = 3/43 (6%) Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +RIDH+++ + S ++ + SDH P++ LD+ Sbjct: 201 LRIDHVLIGDCIE--VVSCQVHSSALAR-SASDHLPLLTELDV 240 Score = 37.1 bits (84), Expect = 3.0, Method: Composition-based stats. Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 5/40 (12%) Query: 4 VTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQET 38 + T+NV+S + +AA I E PD+I LQE Sbjct: 5 IRFLTYNVHSCFGTDRKLDPARIAAVIAECRPDVIALQEV 44 >gi|310790394|gb|EFQ25927.1| endonuclease/Exonuclease/phosphatase [Glomerella graminicola M1.001] Length = 307 Score = 42.1 bits (97), Expect = 0.087, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 23/58 (39%), Gaps = 6/58 (10%) Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL--LHSARIDTKPRGWTKPSDHTPVI 258 Y+ +D N RID I L P++ + + I + SDH PV+ Sbjct: 247 GTYTTFDTSLQ----NSASRIDFIWLGPQSANKYSVQKIEIKSNIASGVVISDHRPVV 300 >gi|223996013|ref|XP_002287680.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220976796|gb|EED95123.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 453 Score = 42.1 bits (97), Expect = 0.087, Method: Composition-based stats. Identities = 41/291 (14%), Positives = 86/291 (29%), Gaps = 34/291 (11%) Query: 4 VTVATWNVNS-----------IRA-RIHNLA--AWIKENNPDIICLQETKTEDKNFPFET 49 ++V +WN++S +R+ R L I+ PD+I LQET ++ Sbjct: 36 LSVVSWNISSAQPSQLAPNIALRSQRAPGLIRDECIRSL-PDVIALQETSHPNQGTDMFG 94 Query: 50 LQSLNY-HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108 S Y ++ Q +++ + E+ +H +L N + + Sbjct: 95 TGSTGYSYVSIGTQVAHHTAEYVDLLVKRELYSHCQTINLQNLPAVAATINLPNGTRIAV 154 Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168 +L+ + T ++ +I GD+N+ ++ Sbjct: 155 ASLH------LPHTSQAAPERKRMCEAIMKGIVSQVGNNIILLGDFNMRKAEDKPTEGLV 208 Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 V S + + + ++ + +R + ++ Sbjct: 209 GGGWMDAWKVVTNSDKSRNFTWNSHDNLYHGPDNFQFTCRFDRCYARGAKLALR-EFQLI 267 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMK 279 T SDH + V LDI QQ + + Sbjct: 268 GNN-----------TVEGKGDYLSDHFGLAVRLDIANDPSNQQSVQAAGAQ 307 >gi|154491719|ref|ZP_02031345.1| hypothetical protein PARMER_01330 [Parabacteroides merdae ATCC 43184] gi|154087960|gb|EDN87005.1| hypothetical protein PARMER_01330 [Parabacteroides merdae ATCC 43184] Length = 287 Score = 42.1 bits (97), Expect = 0.087, Method: Composition-based stats. Identities = 35/269 (13%), Positives = 67/269 (24%), Gaps = 28/269 (10%) Query: 4 VTVATWNVNSIRA------------RIHNLAAWIKENNPDIICLQETKTEDKNFP--FET 49 + V ++N IR R A IK + D+ QE + Sbjct: 27 MNVMSFN---IRMSTKSDGANWWEYRKDLAANVIKFYDVDMFGAQEV--LHNQLTDLLDR 81 Query: 50 LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 L Y G Y+ G+ + + R+ Sbjct: 82 LPDYGYVGVGREDGKTKGEYSPILYRKDRFSVVKSGNFWLAEDMNAVGKKGWDAACERVA 141 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 + + ++ L Q E + ++ + + Sbjct: 142 TWAIFKDKKSGKEFF-----FLNTHLDHMGQVARHEGASLVLKQVKLLSRNLPVIVTGDF 196 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 + +K A ++F DY ++ + ID+I + Sbjct: 197 NAVPTDDPIKVLTDEKDPRHLTHARTLAPLCYGPEWTFHDY--GRVPLDERVWIDYIFVK 254 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVI 258 + + + PSDH PVI Sbjct: 255 GNV--KVLRHGVLAESLDNLYPSDHCPVI 281 >gi|269218137|ref|ZP_06161991.1| endonuclease/exonuclease/phosphatase [Actinomyces sp. oral taxon 848 str. F0332] gi|269212265|gb|EEZ78605.1| endonuclease/exonuclease/phosphatase [Actinomyces sp. oral taxon 848 str. F0332] Length = 261 Score = 42.1 bits (97), Expect = 0.088, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 22/53 (41%), Gaps = 17/53 (32%) Query: 4 VTVATWNVNSIRA-----------------RIHNLAAWIKENNPDIICLQETK 39 + + ++NV S RA + AA I + PD++ LQE + Sbjct: 1 MRLVSFNVQSGRANQSWGGAVLGDDAMNDAAVREAAAEIAQLKPDVLALQEVR 53 >gi|116192681|ref|XP_001222153.1| hypothetical protein CHGG_06058 [Chaetomium globosum CBS 148.51] gi|88181971|gb|EAQ89439.1| hypothetical protein CHGG_06058 [Chaetomium globosum CBS 148.51] Length = 715 Score = 42.1 bits (97), Expect = 0.088, Method: Composition-based stats. Identities = 39/273 (14%), Positives = 65/273 (23%), Gaps = 47/273 (17%) Query: 9 WNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGV 68 WN L A ++E D++ +QE + Sbjct: 310 WNTEG---NKQALEALLEEAQYDLMAIQE---------------------PWINQQTKST 345 Query: 69 AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKI 128 + + + V +F + T + GN Sbjct: 346 YCPRGSKYHLVHKASGRAAIFVSRKFDTGQWEYETSEEHCKVWFPGLGNSGLELWSIYNP 405 Query: 129 SWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN 188 K L+ R ++ AGD+N+ Y E + Sbjct: 406 LEDKTLLQTLLSRPAPAYSVVLAGDFNL------HYPQWDRFGRYERKAEALLELALQWD 459 Query: 189 MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGW 248 + + + IDH S + + RG Sbjct: 460 LDLRTPAGTITRAP----------QGAQRGRTSTIDHFWASVGL----QTTYYGLEYRGK 505 Query: 249 TKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 SDH P I+ DI P +Q N K + Sbjct: 506 ---SDHYPQILEADIGGPLPQQTQPGGWNWKMM 535 >gi|325285062|ref|YP_004260852.1| Endonuclease I [Cellulophaga lytica DSM 7489] gi|324320516|gb|ADY27981.1| Endonuclease I [Cellulophaga lytica DSM 7489] Length = 1889 Score = 42.1 bits (97), Expect = 0.088, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 8/60 (13%) Query: 209 DYYADSWSKNKGIRIDHIMLSPEATSL--LHSARIDTKPRGWTKP---SDHTPVIVSLDI 263 D+ + + +N IDHI ++ E SAR+ + P SDH PV + Sbjct: 1545 DFRSYVFRENM---IDHITITNELNDNYIAESARVHYEFYDSDYPNTVSDHFPVSARFQL 1601 >gi|315128102|ref|YP_004070105.1| hypothetical protein PSM_A3040 [Pseudoalteromonas sp. SM9913] gi|315016615|gb|ADT69953.1| conserved hypothetical protein [Pseudoalteromonas sp. SM9913] Length = 887 Score = 42.1 bits (97), Expect = 0.088, Method: Composition-based stats. Identities = 45/336 (13%), Positives = 81/336 (24%), Gaps = 79/336 (23%) Query: 4 VTVATWNV----NS-------------------IRARIHNLAAWIKENNPDIICLQETKT 40 + VA++NV N IR + ++A I D+I L E Sbjct: 461 LRVASFNVLNYFNGDGQGSGFPTSRGADSEVELIRQQAKLVSA-ISAMQADVIGLMEI-- 517 Query: 41 EDKNF-----------PFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLD 89 E+ F S N + G ++ Sbjct: 518 ENDGFGEFSAVASLVNALNDADSQNQYAFVDFGVDKIGTDAITTALIYRADKVQQVGTAA 577 Query: 90 VQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLI 149 + +L + K A Q Sbjct: 578 ITTDAPFDYSNRAPIAQSFKSLETEEVFTVAVAHLKSKGGCGSATGGNADQNDGQACWNE 637 Query: 150 FAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQK------LQNMGFTDAIRATHDTHH 203 P +++ + ++ + G + + Sbjct: 638 IRTAGANAFADWLNSKPTGVDDEDIILVGDMNAYAMEDPIRAFADKGLKNVVAELDGNTL 697 Query: 204 LYSF-WDYYADSWSKNKGIRIDHIMLSPEATSLLHSA---RIDTKP-------------- 245 YS+ + A S +DH ++SP + + SA I+ Sbjct: 698 GYSYSFSGRAGS--------LDHALVSPSLLNKVVSATDWHINADEPISLDYNVEFKSDA 749 Query: 246 -------RGWTKPSDHTPVIVSLD---IPEPRKKQQ 271 +G + SDH PVIV + I P + + Sbjct: 750 QQSTLYAQGPYRASDHDPVIVDIRSTIIAPPEPEPE 785 >gi|237730766|ref|ZP_04561247.1| conserved hypothetical protein [Citrobacter sp. 30_2] gi|226906305|gb|EEH92223.1| conserved hypothetical protein [Citrobacter sp. 30_2] Length = 253 Score = 42.1 bits (97), Expect = 0.088, Method: Composition-based stats. Identities = 28/251 (11%), Positives = 58/251 (23%), Gaps = 26/251 (10%) Query: 15 RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN--YHIETCGQKSYNGVAILS 72 R + L ++ DI+CLQE +++ H E ++ A Sbjct: 27 RFILPELREAVRTVGADIVCLQEV-MGAHEAHSLHIENWPDTSHYEFLADTMWSDFAYGR 85 Query: 73 KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIK 132 + + ++ R ++ + + Sbjct: 86 NAVYPQGHHGNAVLSRYPIEHYENRDVSVGASEKRGVLYCRIVPPMLSHPIHVMCVHLGL 145 Query: 133 RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192 R +Q L + + D + D + N + Sbjct: 146 REAHRQAQLAMLADWVNALPDAEPVVIAGDFNDWRQTANRPLKAKAGLDEIFTRAHGRPA 205 Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPS 252 +R+D I + S + R W S Sbjct: 206 RTFPVQFPL-------------------LRLDRIYVKNANASTPTT----LALRHWRHLS 242 Query: 253 DHTPVIVSLDI 263 DH P+ + + Sbjct: 243 DHAPLSAEIHL 253 >gi|108757091|ref|YP_631342.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus xanthus DK 1622] gi|108460971|gb|ABF86156.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus xanthus DK 1622] Length = 427 Score = 42.1 bits (97), Expect = 0.089, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 24/62 (38%), Gaps = 7/62 (11%) Query: 220 GIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPR-KKQQDSTSQNM 278 G R D++ SP L +D SDH PV+ D+ P K + + Sbjct: 371 GKRFDNLYASPGLVPRL--FEVDRSTES----SDHQPVVAHYDVRTPGLKDGKPAPGTVQ 424 Query: 279 KP 280 +P Sbjct: 425 RP 426 >gi|16802368|ref|NP_463853.1| hypothetical protein lmo0323 [Listeria monocytogenes EGD-e] gi|224502384|ref|ZP_03670691.1| hypothetical protein LmonFR_07664 [Listeria monocytogenes FSL R2-561] gi|16409687|emb|CAD00850.1| lmo0323 [Listeria monocytogenes EGD-e] Length = 256 Score = 42.1 bits (97), Expect = 0.089, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 30/93 (32%), Gaps = 3/93 (3%) Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230 D + + I H + SF D+ N+ +ID+I +S Sbjct: 166 GDFNTEPDTPTYNFITKKYQDAQLISQKHAKGPIGSFHDFRPL-RPINELEKIDYIFVSE 224 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 E + + SDH PV +LD Sbjct: 225 EF--QVCTYETIVDEVDGFSASDHFPVTANLDW 255 >gi|256841497|ref|ZP_05547004.1| endonuclease/exonuclease/phosphatase [Parabacteroides sp. D13] gi|256737340|gb|EEU50667.1| endonuclease/exonuclease/phosphatase [Parabacteroides sp. D13] Length = 293 Score = 42.1 bits (97), Expect = 0.090, Method: Composition-based stats. Identities = 34/260 (13%), Positives = 85/260 (32%), Gaps = 29/260 (11%) Query: 2 SVVTVATWNV--NSIRARIH--NLAAWIKENNPDIICLQETKTEDKN------FPFETLQ 51 + V V+++N+ N++ ++ A I+ + DI+ +QE +++ P E + Sbjct: 26 ATVKVSSFNIWLNTLGGKLPPSQTAKVIEASQTDIVGIQEGHIYEEDGIKHDHVP-EIAE 84 Query: 52 SLNYHIETCGQKSYN-------GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104 SL +H+ G+ Y I++ + +I Sbjct: 85 SLGFHLFNQGEGHYILSRYPVVDSTASRYGVKIQVGKDKFCWMFNCHLYYIPYQPYQLNG 144 Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 ++ + + + R+ + Q ++ P+ GD+N + Sbjct: 145 IPYGDYPFIDTEEEAVWFANEARREEVTRYQKDIQQVMKEGYPVFLTGDFNEP--SFLDW 202 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH---HLYSFWDYYADSWSKNKGI 221 + + + +G D+ R H Y++ ++ + Sbjct: 203 TQRAADAGIHKIKVEWPATKAFSEIGMNDSYRTIHPDEVSTPGYTWTPVPSEQEILD--- 259 Query: 222 RIDHIMLSPEATSLLHSARI 241 R+D ++ S + + I Sbjct: 260 RLDFVLYSG---CKVTDSFI 276 >gi|220920538|ref|YP_002495839.1| endonuclease/exonuclease/phosphatase [Methylobacterium nodulans ORS 2060] gi|219945144|gb|ACL55536.1| Endonuclease/exonuclease/phosphatase [Methylobacterium nodulans ORS 2060] Length = 259 Score = 42.1 bits (97), Expect = 0.090, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 33/80 (41%), Gaps = 8/80 (10%) Query: 5 TVATWNVNSIR---ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + +WN+ +R A + +AA I+ PD++ +QE E + ++ Sbjct: 25 KIISWNL--LRRSGATVEAVAALIEHEKPDLLLMQEATVEITDLQERVG---GHYAWAPL 79 Query: 62 QKSYNGVAILSKYQPIEIVT 81 + +G+A+ S + Sbjct: 80 PRRIHGLAMWSPTPWLSTPR 99 >gi|147844534|emb|CAN79990.1| hypothetical protein VITISV_021024 [Vitis vinifera] Length = 1226 Score = 42.1 bits (97), Expect = 0.090, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 22/60 (36%), Gaps = 7/60 (11%) Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 +++ + R+D M+SP + T+ R SDH P+I+ Sbjct: 519 QGGSFTW----SGGLHNQAWARLDRFMVSPSWLDQFSNV---TQKRLSRPISDHFPIIIE 571 >gi|68063349|ref|XP_673675.1| exodeoxyribonuclease III [Plasmodium berghei strain ANKA] gi|56491699|emb|CAH95125.1| exodeoxyribonuclease III, putative [Plasmodium berghei] Length = 391 Score = 42.1 bits (97), Expect = 0.090, Method: Composition-based stats. Identities = 17/117 (14%), Positives = 32/117 (27%), Gaps = 1/117 (0%) Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 I + +++ + L+ NII + N Sbjct: 43 ILCKYEFKHCTINDKYIVKKKNGIYLKYINEIFLSLNIILSKENLINIANNIGYTSPECC 102 Query: 179 VRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 + D + + ++ WD Y + NKG RID+I + Sbjct: 103 NDFVNTLICEDNMIDIFSYLYPDMNGKFTCWDTYNPNRITNKGSRIDYIFVDRILFE 159 >gi|47096406|ref|ZP_00234000.1| endonuclease/exonuclease/phosphatase family protein [Listeria monocytogenes str. 1/2a F6854] gi|254900495|ref|ZP_05260419.1| hypothetical protein LmonJ_11794 [Listeria monocytogenes J0161] gi|254913554|ref|ZP_05263566.1| endonuclease/exonuclease/phosphatase family protein [Listeria monocytogenes J2818] gi|254937865|ref|ZP_05269562.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes F6900] gi|47015201|gb|EAL06140.1| endonuclease/exonuclease/phosphatase family protein [Listeria monocytogenes str. 1/2a F6854] gi|258610472|gb|EEW23080.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes F6900] gi|293591565|gb|EFF99899.1| endonuclease/exonuclease/phosphatase family protein [Listeria monocytogenes J2818] Length = 256 Score = 42.1 bits (97), Expect = 0.090, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 30/93 (32%), Gaps = 3/93 (3%) Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230 D + + I H + SF D+ N+ +ID+I +S Sbjct: 166 GDFNTEPDTPTYNFITKKYQDAQLISQKHAKGPIGSFHDFRPL-RPINELEKIDYIFVSE 224 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 E + + SDH PV +LD Sbjct: 225 EF--QVCTYETIVDEVDGFSASDHFPVTANLDW 255 >gi|325180657|emb|CCA15062.1| conserved hypothetical protein [Albugo laibachii Nc14] Length = 515 Score = 42.1 bits (97), Expect = 0.090, Method: Composition-based stats. Identities = 37/298 (12%), Positives = 72/298 (24%), Gaps = 40/298 (13%) Query: 3 VVTVATWNV----------------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFP 46 ++ V T+N+ + IR + + I NPD +QET D Sbjct: 47 IMKVMTFNIRTDQAPEDAGGHCTQWDGIR--KNTVVQQITSQNPDFFGVQET--SDAQKG 102 Query: 47 FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 F Q L + + + Sbjct: 103 FLD-QQLGTYAAIGASSGSLNGISGEWNAIYHQKDIWAPIASGMFWLGPNPDVASVDWGM 161 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 G R+ + + + + Q D Sbjct: 162 T-HYRTCVWGRFKHIPTGITVCVLNTRWETLGNDLAQNNGAKLIVQRLGSLCQQSDKAVV 220 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226 ++ + +A + Q + D + D + D I Sbjct: 221 LLGDMNAKSSSPAVQYLLTQDLKDESVDPTFCGDLVSK-TCSDKF------------DFI 267 Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP-----EPRKKQQDSTSQNMK 279 + A + + + PSDH ++ S + +P K ++ST+ K Sbjct: 268 LHRLPAGVCAIESSVIRQQFNECYPSDHAVLVTSFCLAGDCCKKPDMKSKNSTTNADK 325 >gi|319899949|ref|YP_004159677.1| Endonuclease/exonuclease/phosphatase [Bacteroides helcogenes P 36-108] gi|319414980|gb|ADV42091.1| Endonuclease/exonuclease/phosphatase [Bacteroides helcogenes P 36-108] Length = 287 Score = 42.1 bits (97), Expect = 0.090, Method: Composition-based stats. Identities = 41/284 (14%), Positives = 79/284 (27%), Gaps = 54/284 (19%) Query: 6 VATWNV---------NSIRARIHNLAAWIKENNPDIICLQET-----KTEDKNFP----- 46 V ++N+ N+ R R +A I+ + D++ QE K + P Sbjct: 31 VMSFNIRYDNPEDSLNNWRYRKDRVATAIRFYDTDLLGTQEVLHNQLKDLQECLPEYGVV 90 Query: 47 ---FETLQSLNYHIETCGQKSY-----NGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT 98 E + + +K +G LS+ + G + + Sbjct: 91 GVGREDGKEKGEYSALWYKKDRFVLLDSGNFWLSETPGVAGSKGWDGACERIASWAKLKD 150 Query: 99 FTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP 158 + + G S R + L P+I GD+N P Sbjct: 151 KVSGKEYFALNTHLDHVGVVA--------RSEGIRLILDRVDELSNGLPVIVTGDFNADP 202 Query: 159 QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN 218 + + N T +S +D Sbjct: 203 ESDVIKHVTDPANPRHLTDARMESPVVYGPAWTFHDFGKIP--------YDQRPL----- 249 Query: 219 KGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 ID++ + + + + G SDH+PV+V+++ Sbjct: 250 ----IDYVFVRNGL--KVLRYGVLAETEGNAFLSDHSPVLVTVE 287 >gi|124359464|gb|ABN05905.1| reverse transcriptase, related [Medicago truncatula] Length = 328 Score = 42.1 bits (97), Expect = 0.090, Method: Composition-based stats. Identities = 19/197 (9%), Positives = 51/197 (25%), Gaps = 10/197 (5%) Query: 71 LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISW 130 ++ + ++ F+I+ +RIG + + Sbjct: 1 MTYCPVLWCFCLHNLQLDVLEIDDQLVAFSISYNNIRIGISTVYASTTYIHRRLIWNKLQ 60 Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE----NDACFTLEVRQSFQKL 186 + + + I + ++ N+ L +F Sbjct: 61 NIQNQQLIPWCFMGDFNSILGAHEHRGHCVPARAPMEEFQLSTNNNHLIHLPTAGAFFTW 120 Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR 246 + + ++ + + N R+D + + + S T R Sbjct: 121 RPGSGLSKPGLAWPIPNP-TWRSGRSGTR--NTERRLDRCICNQRWMDFVSSVNCSTLIR 177 Query: 247 GWTKPSDHTPVIVSLDI 263 SDH P+++ + Sbjct: 178 NQ---SDHYPILLYFQL 191 >gi|288928392|ref|ZP_06422239.1| endonuclease/Exonuclease/phosphatase [Prevotella sp. oral taxon 317 str. F0108] gi|288331226|gb|EFC69810.1| endonuclease/Exonuclease/phosphatase [Prevotella sp. oral taxon 317 str. F0108] Length = 321 Score = 42.1 bits (97), Expect = 0.091, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 25/68 (36%), Gaps = 21/68 (30%) Query: 223 IDHIMLSPEATSLLHSARI--------DTKPRGWTKP-------------SDHTPVIVSL 261 +DH+ +S + S I D + G +P SDH PV+V+ Sbjct: 253 LDHVFVSQKIHEKGVSCHIFDAPFLMEDEEKYGGKRPWRTYQGPKYLGGFSDHLPVVVTF 312 Query: 262 DIPEPRKK 269 +P + Sbjct: 313 GMPNAASR 320 >gi|260912305|ref|ZP_05918856.1| endonuclease/exonuclease/phosphatase family protein [Prevotella sp. oral taxon 472 str. F0295] gi|260633606|gb|EEX51745.1| endonuclease/exonuclease/phosphatase family protein [Prevotella sp. oral taxon 472 str. F0295] Length = 321 Score = 42.1 bits (97), Expect = 0.091, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 26/69 (37%), Gaps = 21/69 (30%) Query: 223 IDHIMLSPEATSLLHSARI--------DTKPRGWTKP-------------SDHTPVIVSL 261 +DHI +S S RI D + G +P SDH P++V+ Sbjct: 253 LDHIYVSRLLHEKGVSCRIFDAPFLLEDEEKYGGKRPWRTYQGPKYLGGFSDHLPLVVTF 312 Query: 262 DIPEPRKKQ 270 +PE K Sbjct: 313 GMPETTVKP 321 >gi|254430067|ref|ZP_05043774.1| endonuclease/exonuclease/phosphatase family [Alcanivorax sp. DG881] gi|196196236|gb|EDX91195.1| endonuclease/exonuclease/phosphatase family [Alcanivorax sp. DG881] Length = 300 Score = 42.1 bits (97), Expect = 0.091, Method: Composition-based stats. Identities = 43/286 (15%), Positives = 78/286 (27%), Gaps = 65/286 (22%) Query: 3 VVTVATWNV-NSI--------------------RAR--IHNLAAWIKENNPDIICLQETK 39 V + ++N+ I R+ I +A + ++ D++ LQE Sbjct: 42 TVKLMSFNIQAGIGSQKFGDYITGSWKHLVAHPRSVETIEQIAEVL--SHFDVVGLQEV- 98 Query: 40 TEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF 99 D + ++ N + L+ +L +F F Sbjct: 99 --DGG--------------SLRSRNMNQLVHLASMADFPFWHQQLNRNLGRLGQFSNG-F 141 Query: 100 TINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159 Q I + LP + + A L + + Sbjct: 142 LSRHQPFEITDHRLPGLPGRGAIVIKYGHPIQPLVVVVAHLALGEKVRNTQLSYLARLLA 201 Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK 219 + + L N T +L ++ + D Sbjct: 202 DY---------KYVVMMGDFNCRLTHLDNSPLAALGLQTVQADNLNTYPSWAPD------ 246 Query: 220 GIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 IDHI+LSP+ S R+ T SDH P+ + IP+ Sbjct: 247 -RHIDHILLSPDLESR--HTRVLTDCL----LSDHLPLATEIVIPD 285 >gi|147866083|emb|CAN84133.1| hypothetical protein VITISV_000111 [Vitis vinifera] Length = 1527 Score = 42.1 bits (97), Expect = 0.091, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 19/34 (55%), Gaps = 2/34 (5%) Query: 8 TWNVNSIRARIHN--LAAWIKENNPDIICLQETK 39 +WN + + + +++ NPD++ +QETK Sbjct: 549 SWNAKGLGSSNKRRVIKDFLRSENPDVVMIQETK 582 >gi|197116747|ref|YP_002137174.1| endonuclease/exonuclease/phosphatase family protein [Geobacter bemidjiensis Bem] gi|197086107|gb|ACH37378.1| endonuclease/exonuclease/phosphatase family protein [Geobacter bemidjiensis Bem] Length = 343 Score = 42.1 bits (97), Expect = 0.091, Method: Composition-based stats. Identities = 39/264 (14%), Positives = 76/264 (28%), Gaps = 27/264 (10%) Query: 4 VTVATWNVNSIRARIHNLAAW---IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 + V TWN I+ H+L ++ + PDI+ Q Y + Sbjct: 95 LRVMTWN---IKYGKHDLMPLVEELERSRPDIVLFQ------DAVRAGAGPLAGY-FKDW 144 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 S I S+Y + + + + + + +++ Sbjct: 145 HLLSQGRYLIASRYPLSAAEVFELPYSGRSKEYLLRCKVRVGSSEISLYDVHFKTPRRSL 204 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + K ++ A +R E L + P++ D Sbjct: 205 NAF--RKAKQGPWYIPDAVERFEDNVTLRLIQARTVAGYLSREKGPVLVAGDLNSPDSS- 261 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS---KNKGIRIDHIMLSPEATSLLH 237 + A + Y++ + + + +RIDH+M + T Sbjct: 262 -LVCRTLREAGLADAFAAAGEGYGYTYGHFLLKNRIPLLRVSWMRIDHVMTNSWLT--AS 318 Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261 R+ G + SDH PVI Sbjct: 319 RCRV-----GTGRASDHRPVIADF 337 >gi|313158021|gb|EFR57427.1| endonuclease/exonuclease/phosphatase family protein [Alistipes sp. HGB5] Length = 279 Score = 42.1 bits (97), Expect = 0.092, Method: Composition-based stats. Identities = 38/288 (13%), Positives = 72/288 (25%), Gaps = 60/288 (20%) Query: 4 VTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNF--------- 45 ++V T+N+ N+ R R +A IK D++ QE F Sbjct: 22 LSVMTFNMRYDNPEDGQNNWRFRRERVAGVIKAQEVDVLGTQE--LLSNQFNDLSGLLTG 79 Query: 46 -------PFETLQSLNYHIETCGQKSY---NGVAILSKYQPIEIVTHLPGDDLDVQARFI 95 + ++S Y + + + P + + + A ++ Sbjct: 80 YQGVGVGRLDGVESGEYCAVFFRKDRFTLLDSGTFWLSETPEVVGSLGWDGACERIATWV 139 Query: 96 EATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYN 155 + I G L + L P+I GD+N Sbjct: 140 VLRDRDGREFFFIDTHLDHVGQVA--------RDEGVSLLMKRIETLSGGRPVILTGDFN 191 Query: 156 IIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW 215 P + D + Q+ + Sbjct: 192 SEPGSSVVAHVQ---KDGVLRDAKAIAAQRSGTDWSFSDFGQIPEAERPL---------- 238 Query: 216 SKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +D+I +S + + SDH PV+ + I Sbjct: 239 -------LDYIFVSGDIE--AVRYEVLPDTFDGGYVSDHAPVMAVVKI 277 >gi|217965584|ref|YP_002351262.1| endonuclease/exonuclease/phosphatase family protein [Listeria monocytogenes HCC23] gi|217334854|gb|ACK40648.1| endonuclease/exonuclease/phosphatase family protein [Listeria monocytogenes HCC23] gi|307569865|emb|CAR83044.1| endonuclease/exonuclease/phosphatase family protein [Listeria monocytogenes L99] Length = 256 Score = 42.1 bits (97), Expect = 0.092, Method: Composition-based stats. Identities = 35/271 (12%), Positives = 71/271 (26%), Gaps = 26/271 (9%) Query: 3 VVTVATWNVN---------SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + +V T+N+ S R + + + D + ++E + + + Sbjct: 1 MFSVTTFNIRFDDTSERKKSWELRKTLTKSLLDKYQWDFMGVEE-PLLPQMLDMKAMLDW 59 Query: 54 NYH-IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 +Y + + + L T + + + Sbjct: 60 DYFGVGRDDGLEKGEFTAVFYNSTRFTLLQEGHFWLSDTPDVPSIHSTAMFPRICVWGKF 119 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 + FASQ L + +I I+ + N Sbjct: 120 ADSDGKQFYLFNTHLDHISEEARLFASQLLLKKAAIIAENSPVIVLGDFNTQPNTPTYNY 179 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 + Q + G T H +N+ +ID+I +S E Sbjct: 180 ITEKYQDAQLISQKPAKGPTGCFHDFHPL-------------RPENELEKIDYIFVSNEF 226 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +++ SDH PV +LD Sbjct: 227 --QVNTYETIVDEVDGFSASDHFPVTANLDW 255 >gi|260808289|ref|XP_002598940.1| hypothetical protein BRAFLDRAFT_221680 [Branchiostoma floridae] gi|229284215|gb|EEN54952.1| hypothetical protein BRAFLDRAFT_221680 [Branchiostoma floridae] Length = 114 Score = 42.1 bits (97), Expect = 0.093, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 24/44 (54%), Gaps = 2/44 (4%) Query: 2 SVVTVATWNVNSI--RARIHNLAAWIKENNPDIICLQETKTEDK 43 + +++ + NV + + + +L +++K DII LQET + Sbjct: 1 NDISLLSLNVRGLLEKNKRRSLLSYVKNQKADIIFLQETHFTAE 44 >gi|260593422|ref|ZP_05858880.1| AP endonuclease domain protein [Prevotella veroralis F0319] gi|260534698|gb|EEX17315.1| AP endonuclease domain protein [Prevotella veroralis F0319] Length = 367 Score = 42.1 bits (97), Expect = 0.094, Method: Composition-based stats. Identities = 40/276 (14%), Positives = 74/276 (26%), Gaps = 38/276 (13%) Query: 4 VTVATWNVNSIRARIHN------LAAWIKENNPDIICLQETKTE---DKNFPFETLQSLN 54 + V ++NV + + +I ++ D++CLQE + DKN + Sbjct: 102 IKVLSYNVYMFDSWEETNPKTNPIVNYIIDSKADLVCLQE--AQGDGDKNGGIYKRLKAH 159 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 Y K G + I+ + + I + N + Sbjct: 160 YPYFKLMVKKKPGADYMVLLSRYPILWQDTIPYGSSSNQSVAYMVDIKGTKTLVVNNHFE 219 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQ---RLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 K K R ++ L + + Y + Sbjct: 220 SNGLSNDDKAGFKSLVKGRMRTNKAKSESVHLLRKLGKVSMRRAPQADMVARYVKQYLDK 279 Query: 172 DACFTLEVRQ------SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI--RI 223 L ++ + D A+ + + Y+ G+ RI Sbjct: 280 KVPIILCGDFNDNPLSYTHRVIDKELIDCFVASGNGPGI----SYHR------SGMYFRI 329 Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 DHI S + A +D SDH P+ Sbjct: 330 DHIFCSDDFEPY--DAHVDNSVT----ASDHYPIYC 359 >gi|126665590|ref|ZP_01736572.1| Endonuclease/exonuclease/phosphatase [Marinobacter sp. ELB17] gi|126630218|gb|EBA00834.1| Endonuclease/exonuclease/phosphatase [Marinobacter sp. ELB17] Length = 536 Score = 42.1 bits (97), Expect = 0.094, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 26/73 (35%), Gaps = 22/73 (30%) Query: 207 FWDYYADSWSKNKGIR--IDHIMLSPEATSLLHSARIDT---------KPRGWTKP---- 251 + Y KG R +DH + S + SA++ R + P Sbjct: 470 HYSYRF------KGARGSLDHALASAALKPRVLSAKVWNINADQPRIADYRSHSSPQPWR 523 Query: 252 -SDHTPVIVSLDI 263 SDH P+I + + Sbjct: 524 SSDHNPLITDIKL 536 >gi|221633952|ref|YP_002523178.1| putative endonuclease/exonuclease/phosphatase family protein [Thermomicrobium roseum DSM 5159] gi|221156684|gb|ACM05811.1| putative endonuclease/exonuclease/phosphatase family protein [Thermomicrobium roseum DSM 5159] Length = 608 Score = 42.1 bits (97), Expect = 0.095, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 7/44 (15%) Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 RID++ ++ E L S SDH PV+V L +P Sbjct: 572 RRIDYLFITDELRPLAGSV-------PPISASDHRPVVVRLALP 608 >gi|125606578|gb|EAZ45614.1| hypothetical protein OsJ_30281 [Oryza sativa Japonica Group] Length = 1068 Score = 42.1 bits (97), Expect = 0.095, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 26/59 (44%), Gaps = 7/59 (11%) Query: 204 LYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP-SDHTPVIVSL 261 Y++ D + N +R+D ++ + ++++ T P SDH P++V Sbjct: 413 PYTY-DNRREGR-NNVKVRLDRVLADNSWRDIFSNSQVVH----MTSPCSDHCPILVRF 465 >gi|134083|sp|P21328|RTJK_DROME RecName: Full=RNA-directed DNA polymerase from mobile element jockey; AltName: Full=Reverse transcriptase gi|157825|gb|AAA28675.1| ORF2, reverse transcriptase (put.); putative [Drosophila melanogaster] Length = 916 Score = 42.1 bits (97), Expect = 0.095, Method: Composition-based stats. Identities = 31/263 (11%), Positives = 64/263 (24%), Gaps = 50/263 (19%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + WN + L ++ +++ D++ ET + Y + Sbjct: 5 TLKIGLWNARGLTRGSEELRIFLSDHDIDVMLTTETHMRVGQ----RIYLPGYLMYHAHH 60 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 S N + + + + T+ + +YLP Sbjct: 61 PSGNSRGGSAVIIKSRLCHSPLTPISTNDRQIARVHLQTSVGTVTVAAVYLPPAERWIVD 120 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + S L I GDYN W + + Sbjct: 121 DF-------------KSMFAALGNKFIAGGDYNAKHA---------WWGNPRSCPRGKML 158 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI- 241 + + + + +F+ Y +L+P A + Sbjct: 159 QEVIAHGQYQVLAT------GEPTFYSYNP--------------LLTPSALDFFITCGYG 198 Query: 242 ---DTKPRGWTKPSDHTPVIVSL 261 SDH P++ L Sbjct: 199 MGRLDVQTLQELSSDHLPILAVL 221 >gi|288929073|ref|ZP_06422919.1| endonuclease/exonuclease/phosphatase family protein [Prevotella sp. oral taxon 317 str. F0108] gi|288330057|gb|EFC68642.1| endonuclease/exonuclease/phosphatase family protein [Prevotella sp. oral taxon 317 str. F0108] Length = 313 Score = 42.1 bits (97), Expect = 0.096, Method: Composition-based stats. Identities = 35/277 (12%), Positives = 72/277 (25%), Gaps = 57/277 (20%) Query: 21 LAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEI 79 +A + ++PD QE K + + L +Y + + + + Sbjct: 58 IADQLNYHHPDAFGAQEVLKGQLDDL-LRALPDYDY-VGVGRDDGHEAGEYAPIFYRRDR 115 Query: 80 VTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFAS 139 + L + + + + +RI + ++ Sbjct: 116 LDKLSDGYFWLSPTYTTPSLGWDAACIRICTWAKFRVRESGEVFLFFNLHTDHVGVKARR 175 Query: 140 QRLE-----------LEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN 188 + + + P++ GD+N+ A + + Sbjct: 176 ESAKLVMKAIDGLGGKDMPVVLTGDFNVDQTDETYAIFTAN---ARLNDAYVVAKHRFAE 232 Query: 189 MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT--------------- 233 G ++ T T RIDH+ +SP Sbjct: 233 NGTFNSFDPTLKTT------------------SRIDHVFVSPRFAVARYGVLPNFYWTEE 274 Query: 234 -----SLLHSA--RIDTKPRGWTKPSDHTPVIVSLDI 263 A +ID K SDH PV V +++ Sbjct: 275 PAAKSQKGQDAPQQIDFKQHRIRTASDHYPVFVEVNL 311 >gi|330805758|ref|XP_003290845.1| hypothetical protein DICPUDRAFT_155390 [Dictyostelium purpureum] gi|325079008|gb|EGC32630.1| hypothetical protein DICPUDRAFT_155390 [Dictyostelium purpureum] Length = 77 Score = 42.1 bits (97), Expect = 0.097, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 1/40 (2%) Query: 1 MSVVTVATWNVNS-IRARIHNLAAWIKENNPDIICLQETK 39 + + ++N+N +++ N+ + N IICLQETK Sbjct: 34 FKNLNILSFNINGDFTSKLKNIIKLSIKKNIKIICLQETK 73 >gi|331230830|ref|XP_003328079.1| hypothetical protein PGTG_09373 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309307069|gb|EFP83660.1| hypothetical protein PGTG_09373 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 532 Score = 42.1 bits (97), Expect = 0.097, Method: Composition-based stats. Identities = 42/261 (16%), Positives = 71/261 (27%), Gaps = 35/261 (13%) Query: 31 DIICLQETKTEDKNFPFETLQSLN---YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDD 87 DI+ LQE Y +G+AILS++ I H + Sbjct: 102 DIVALQELWVYHDFLVIRDRAKEGGFKYSKWFHSAALGSGLAILSRFPIISSHFHPYLLN 161 Query: 88 LDVQARFIEATF-------------TINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRF 134 F T+ + +LY PH P K + + Sbjct: 162 GHPLHFIQGDFFVGKSVGSCLLDVPTVGEVEVFTTHLYAPHDVPAPEWKRAHRTAQAWEL 221 Query: 135 LRFASQRLELEEPLIFAGDYNIIPQPHDCYN-------PIIWENDACFTLEVRQSFQKLQ 187 + E + GD N +P W L + + Sbjct: 222 AKLVRASAERGRTVFVCGDLNSVPSSLPITLLQSYGQLRDSWIASHPNGLSTISTNEMTY 281 Query: 188 NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS--------LLHSA 239 + + ++ A+ +K G R+D+I+ P A + Sbjct: 282 RTAIQEEGITCDSLINTFTASKNAANRGAKGYGKRLDYILYRPAAKRLTRRDRLGRCQTE 341 Query: 240 RIDTKPRGWTKPSDHTPVIVS 260 ID + DH VI++ Sbjct: 342 FIDDQNITC----DHCAVILT 358 >gi|56477773|ref|YP_159362.1| endonuclease / exonuclease / phosphatase family protein [Aromatoleum aromaticum EbN1] gi|56313816|emb|CAI08461.1| predicted endonuclease / exonuclease / phosphatase family protein [Aromatoleum aromaticum EbN1] Length = 250 Score = 42.1 bits (97), Expect = 0.098, Method: Composition-based stats. Identities = 28/280 (10%), Positives = 73/280 (26%), Gaps = 51/280 (18%) Query: 1 MSVVTVATWNVN-SI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 M + V T+N++ R +H L ++ + D++ LQE +L+ Sbjct: 1 MPALRVCTYNIHKGFSQFNRRMVVHELRERLRTLDVDVVFLQEV-----QGLHLGHANLH 55 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 + Q + + S++ + G + I + Sbjct: 56 PNWPGSPQHEFLAEDVWSQFAYGGNAVYDHGHHGNAVLSRYP-----------IVSSMNQ 104 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 + + ++ + AG + A Sbjct: 105 DVSDHRFERRGILHCEVEVPGIGEPVHCVCAHLGLMAGSRRRQMGALAERMEQVAPGGAP 164 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG------------IR 222 + + + + + ++ + +G + Sbjct: 165 LIIAGDFNDWRNRAAQLLGRRLGLRE-------------AFDRGRGEPARSFPSTVPVLC 211 Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 +D I + + A++ W++ SDH + L+ Sbjct: 212 LDRIYVRGF---RVRQAQVHCG-LPWSRISDHAALTAELE 247 >gi|331662145|ref|ZP_08363068.1| putative cytoplasmic protein [Escherichia coli TA143] gi|331060567|gb|EGI32531.1| putative cytoplasmic protein [Escherichia coli TA143] Length = 253 Score = 42.1 bits (97), Expect = 0.098, Method: Composition-based stats. Identities = 31/251 (12%), Positives = 59/251 (23%), Gaps = 26/251 (10%) Query: 15 RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN--YHIETCGQKSYNGVAILS 72 R + L ++ + DI+CLQE +++ H E ++ A Sbjct: 27 RFILPELRDAVRTVSADIVCLQEV-MGAHEVHPLHVENWPDTSHYEFLADTMWSDFAYGR 85 Query: 73 KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIK 132 E + +++ R + + Sbjct: 86 NAVYPEGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVPPMTGKAIHVMCVHLGL 145 Query: 133 RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192 R +Q L E + D + D + N + Sbjct: 146 REAHRQAQLAMLAEWVNELPDGEPVLVAGDFNDWRQKANHPLKVQAGLDEIFTRAHGRPA 205 Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPS 252 +R+D I + + SA R W S Sbjct: 206 RTFPVQFPL-------------------LRLDRIYV----KNASASAPTALPLRTWRHLS 242 Query: 253 DHTPVIVSLDI 263 DH P+ + + Sbjct: 243 DHAPLSAEIHL 253 >gi|295398413|ref|ZP_06808453.1| RgfB protein [Aerococcus viridans ATCC 11563] gi|294973366|gb|EFG49153.1| RgfB protein [Aerococcus viridans ATCC 11563] Length = 278 Score = 42.1 bits (97), Expect = 0.098, Method: Composition-based stats. Identities = 30/281 (10%), Positives = 66/281 (23%), Gaps = 30/281 (10%) Query: 4 VTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQET-------KTEDKNFPFET 49 + + T N +S + +A I E + D++ LQE + + KN Sbjct: 1 MKLLTLNTHSYGEENQDQKLAF--IAQSIAEWDIDVVGLQEVNQKIIGHRVDVKNIV--N 56 Query: 50 LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 ++ + + L + + Sbjct: 57 FVPMDGQVNVKEDNFAMRLVALLAELGKTYYWAWAMTHIAHDTMQEGVAILSKYPIDSVT 116 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 + + + K ++ S + G+ N Sbjct: 117 SYNVSKSHNWYDYKTRRILTAKITKPNGESFMAVSGHFSWWHGENNEEFHYEWQETEKYL 176 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK---GI----- 221 + G+ + Y+ + + K G Sbjct: 177 TRTKLPIYFMGDFNNPAGTDGYDYMVSTAIPITDSYTIAEETVGGPTVLKEIGGWTGLKE 236 Query: 222 --RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 RID+I + + + + SDH+ V+V Sbjct: 237 QIRIDYIFVPKGVA--VKKSEVVFDGERQQAVSDHSGVLVE 275 >gi|147794985|emb|CAN76142.1| hypothetical protein VITISV_007730 [Vitis vinifera] Length = 728 Score = 42.1 bits (97), Expect = 0.098, Method: Composition-based stats. Identities = 12/61 (19%), Positives = 26/61 (42%), Gaps = 9/61 (14%) Query: 201 THHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 +++ + N+ R+D ++SP + + A T+ R SDH P+++ Sbjct: 138 QGGEFTW-----NGGLNNQVWARLDRFLVSPTWLEMFNGA---TQIRLSRPISDHFPIVL 189 Query: 260 S 260 Sbjct: 190 E 190 >gi|99081700|ref|YP_613854.1| endonuclease/exonuclease/phosphatase [Ruegeria sp. TM1040] gi|99037980|gb|ABF64592.1| Endonuclease/exonuclease/phosphatase [Ruegeria sp. TM1040] Length = 344 Score = 42.1 bits (97), Expect = 0.098, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 25/61 (40%), Gaps = 12/61 (19%) Query: 223 IDHIMLSPEATSLLHSARI-----DTKPRGWT-------KPSDHTPVIVSLDIPEPRKKQ 270 +D+IM+SP + RI D G SDH PV + LD+ + + + Sbjct: 278 LDYIMISPPLQACAPRWRIWHPFEDAACYGTPSLCHALLTASDHFPVTLDLDLTQASRPE 337 Query: 271 Q 271 Sbjct: 338 D 338 >gi|270009208|gb|EFA05656.1| hypothetical protein TcasGA2_TC015867 [Tribolium castaneum] Length = 488 Score = 42.1 bits (97), Expect = 0.099, Method: Composition-based stats. Identities = 10/39 (25%), Positives = 16/39 (41%) Query: 9 WNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPF 47 WN N +RA L ++ DI+ + E + P Sbjct: 410 WNANGLRAARDELEEFVDRLQLDIVLVCELVATSNDGPK 448 >gi|254574412|ref|XP_002494315.1| Mitochondrial membrane localized inositol phosphosphingolipid phospholipase C [Pichia pastoris GS115] gi|238034114|emb|CAY72136.1| Mitochondrial membrane localized inositol phosphosphingolipid phospholipase C [Pichia pastoris GS115] Length = 413 Score = 42.1 bits (97), Expect = 0.099, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 25/53 (47%), Gaps = 11/53 (20%) Query: 1 MSVVTVATWNVNSIR-------ARIHNLAAWIK---ENNPDIICLQETKTEDK 43 MS + + T+N ++ R+ +A + +++ DI+ LQE ++ Sbjct: 1 MS-LKLLTFNTWGLKYVSKHRQERLRAIADELADDTKHDYDIVALQEVWCDED 52 >gi|168486747|ref|ZP_02711255.1| metal-dependent hydrolase [Streptococcus pneumoniae CDC1087-00] gi|168490847|ref|ZP_02714990.1| metal-dependent hydrolase [Streptococcus pneumoniae CDC0288-04] gi|183570235|gb|EDT90763.1| metal-dependent hydrolase [Streptococcus pneumoniae CDC1087-00] gi|183574548|gb|EDT95076.1| metal-dependent hydrolase [Streptococcus pneumoniae CDC0288-04] Length = 271 Score = 42.1 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 29/264 (10%), Positives = 70/264 (26%), Gaps = 14/264 (5%) Query: 4 VTVATWNVNSI--RARIHNL---AAWIKENNPDIICLQETK-------TEDKNFPFETLQ 51 + T N +S + I E + ++IC QE E + Sbjct: 1 MKFLTLNTHSWMEKEAEEKFQILLEDILEKDYNLICFQEINQEMTSSEVEVNDLYQALPA 60 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 + + H + + + K + G D + I + I + + + ++ Sbjct: 61 AESIHQDHYVRLLVEKLLEQGKNYYWTWAYNHIGYDRYHEGVAILSKTPIEAREILVSDV 120 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 P + + K + ++ ++ + Sbjct: 121 DDPTDYHTRRVALAETVVDGKELAVASVHLSWWDKGFQEEWARFEAVLKKLNKPLLLAGD 180 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 + +G DA + Y+ + +RID++ + E Sbjct: 181 FNNPAGQEGYQAILASPLGLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTTKE 240 Query: 232 ATSLLHSARIDTKPRGWTKPSDHT 255 + + + + SDH Sbjct: 241 LA--VENLHVVFDGNKSPQVSDHY 262 >gi|71989663|ref|NP_504373.2| hypothetical protein F14F9.5 [Caenorhabditis elegans] gi|75022238|sp|Q9GUC9|YFEF9_CAEEL RecName: Full=Uncharacterized protein F14F9.5; Flags: Precursor gi|33620952|gb|AAF98622.2| Hypothetical protein F14F9.5 [Caenorhabditis elegans] Length = 314 Score = 42.1 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 36/295 (12%), Positives = 74/295 (25%), Gaps = 47/295 (15%) Query: 4 VTVATWNV-NSIRARIHNLAAWIKEN----NPDIICLQETKTEDKNFPFETLQSLNYHIE 58 + + T+N+ NS A + N I ++ NPD++ LQE N L + Sbjct: 27 IRLMTFNIWNSG-ANVENGQQKIAKHILMVNPDVVALQEVYA---NVTRNLTLMLGHPWV 82 Query: 59 ----------------TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN 102 + N + I + T + + Sbjct: 83 AVERNHEYPDTAILTRHVLIPNTNLSTSGAVGVKIMLRTGFMIHFWSLHLDYTSYGPYAA 142 Query: 103 TQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD 162 L + G + +I + ++ + ++ I Sbjct: 143 NNKLVDKLDQIMAGENVGRGPQIYEILNLPMMKKWMEKVEDV-PIFIAGDFNGPSHLDWT 201 Query: 163 CYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF---------WDYYAD 213 I + ++ ++ + F + + ++ W+Y Sbjct: 202 EQTKKIHGDWVIRWPATKELEEREFSDTFREIYPNVVSDPGI-TWSTVNKFNPEWNYTIP 260 Query: 214 SWSKNKGIRIDHIMLSPEATSL--LHSARIDTKPR-----GWTKPSDHTPVIVSL 261 RID + L + + R PSDH V Sbjct: 261 EPQD----RIDFLFYKGPVVPYQILTYSGCEKPQRIPFHSKNDYPSDHFAVFADY 311 >gi|297180781|gb|ADI16988.1| hypothetical protein [uncultured Sphingobacteriales bacterium HF0010_19H17] Length = 357 Score = 42.1 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 44/280 (15%), Positives = 89/280 (31%), Gaps = 42/280 (15%) Query: 18 IHNLAAWIKENNP-DIICLQET-----KTEDKNFPFETLQSLNYHI-------------E 58 + + +I++++ D LQE ++ NF S Y+ Sbjct: 95 MDGVIDFIQKHSYVDFFLLQEVDSMSWRSNKLNFFQRIENSWQYNYTLNYASSFVPIPIF 154 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 Y G+ ++ + I+ + + R TQ + + L N Sbjct: 155 NPLGPVYGGLCSMTHFPVIDAYRYDLRTESAWPKRLFFLKRCFLTQRIPLLEKELIVINI 214 Query: 119 ITSTKYDDKISWIKRFLR---FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 S I K FA + ++ GD+N P + D+ F Sbjct: 215 HNSAYDKSGIKKNKEMQHILNFAEREFYKGNYVVIGGDWNQSPPNYSNNTIPELYKDSSF 274 Query: 176 -TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA-T 233 +V Q ++ + ++ + S+ IDH ++SP Sbjct: 275 TNDDVPQDWKWVADVNTPTNRKLNMPYIKGLSYTSV------------IDHYLISPNVSV 322 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDS 273 + A +D + K SDH PV + + + + + + + Sbjct: 323 DSI--AVVDMQ----FKYSDHQPVYLKVTLDKGSNQAKPA 356 >gi|294650031|ref|ZP_06727419.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC 19194] gi|292824124|gb|EFF82939.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC 19194] Length = 822 Score = 42.1 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 24/78 (30%), Gaps = 24/78 (30%) Query: 223 IDHIMLSPEATSLLHSARI------------DTKPRGWT------------KPSDHTPVI 258 +DH + S + A + + + SDH PVI Sbjct: 718 LDHAIADSNLYSKVKKAFVWHINADEPTVLDYNEEYKTDEQKALFFAEDPYRSSDHDPVI 777 Query: 259 VSLDIPEPRKKQQDSTSQ 276 V +D+ +P K S Sbjct: 778 VDIDLQDPENKPSTQKSS 795 >gi|116748060|ref|YP_844747.1| endonuclease/exonuclease/phosphatase [Syntrophobacter fumaroxidans MPOB] gi|116697124|gb|ABK16312.1| Endonuclease/exonuclease/phosphatase [Syntrophobacter fumaroxidans MPOB] Length = 291 Score = 42.1 bits (97), Expect = 0.10, Method: Composition-based stats. Identities = 29/274 (10%), Positives = 65/274 (23%), Gaps = 33/274 (12%) Query: 2 SVVTVATWNVNSIRA------------RIHNLAAWIKENNPDIICLQETKTEDKNFPFET 49 ++ V T+N +R R +A + P ++ QE F E Sbjct: 38 RLMRVMTFN---LRFENDSDGENRWGCRRDMVARIVARYGPSVLGTQEGMVSQLRFLEEH 94 Query: 50 LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 LQ Y + + + + +++ L GD+ + Sbjct: 95 LQ--GYELYAPRRFWDESCQYPTLFYRRDVMRPLEGDEFWLSLTPRVHRSKSWDSAF--- 149 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 + G + + + + + A + I Sbjct: 150 PRMISFGRFE-------SLEDGRAVWVGVTHLDHIGDAARAAQAERVAEWACGRDGSCIL 202 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 D + + ++ + R+D ++ S Sbjct: 203 MGDFNDVPGSPAHRLLTDVLQDCWEALGRSEDESGMTYHKFTGIPQIA----RMDWVLAS 258 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + + + PSDH P + Sbjct: 259 RDM--RVLDQVVVRDQESGRYPSDHFPCFADVKW 290 >gi|327277808|ref|XP_003223655.1| PREDICTED: nuclear receptor subfamily 5 group A member 2-like [Anolis carolinensis] Length = 855 Score = 41.7 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 10/75 (13%) Query: 188 NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRG 247 ++G D R + Y+F + +WS RID I + TS +I + Sbjct: 94 DLGLLDIWRHRNGRERDYTFLSHRHSTWS-----RIDMIWGTKLITSQATVIKILPRLY- 147 Query: 248 WTKPSDHTPVIVSLD 262 SDH P+ + ++ Sbjct: 148 ----SDHAPMEILIE 158 >gi|322373807|ref|ZP_08048342.1| RgfB protein [Streptococcus sp. C150] gi|321277179|gb|EFX54249.1| RgfB protein [Streptococcus sp. C150] Length = 270 Score = 41.7 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 27/277 (9%), Positives = 69/277 (24%), Gaps = 26/277 (9%) Query: 4 VTVATWNVNSIRARIH----NLAAWIKEN----NPDIICLQETKTEDKNFPFETLQ-SLN 54 + T N +S + +K+ D+IC QE ++ + Sbjct: 1 MKFLTLNTHS---WMEEDAEGKFQTLKKQILKAQYDLICFQEV---NQEIETSVVATDAY 54 Query: 55 YHIETCGQKSYNGVAIL---------SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT 105 YH + + + G D + + + + Sbjct: 55 YHALPSATPIHQDHFVRLLVEKLAEEGLQYHWTWAYNHIGYDHLNEGVAVLSRQPLTASE 114 Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165 + + ++ P + + + ++ Sbjct: 115 ILVSDVDDPTDYHTRRVAVAETTVDGREVAVASVHLSWWDKGFQEEWARIEERFKAIGKP 174 Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225 I+ + + + D+ +T Y+ + +RID+ Sbjct: 175 LILAGDFNNPAGQEGYQAILASPLHLQDSFEVAKETTGSYTVGPGIDGWKGNEEPLRIDY 234 Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + S + T ++ + SDH + L+ Sbjct: 235 VFASQDWT--VNRLSVIFDGNNQPLVSDHYGLEAELE 269 >gi|212694729|ref|ZP_03302857.1| hypothetical protein BACDOR_04261 [Bacteroides dorei DSM 17855] gi|212662708|gb|EEB23282.1| hypothetical protein BACDOR_04261 [Bacteroides dorei DSM 17855] Length = 334 Score = 41.7 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 35/257 (13%), Positives = 67/257 (26%), Gaps = 37/257 (14%) Query: 4 VTVATWNVNSIRARIHNLAAW---IKENNPDIICLQE---TKTEDKNFPFETLQSLNYHI 57 + + WN R LA I+ P I+CLQE T + Y I Sbjct: 96 LKLVCWNAEGFRLNKDTLAKAAHSIRILQPGIVCLQERPHTNLLAWDTIQAAFPDYPYCI 155 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 + +A+ S++ + + D + + + + G Sbjct: 156 INSREDEILNLAVFSRWPVGNVQEYYFPDSYNKMLQADIRMIGQTFRLFNVH--LQTTGM 213 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 +S+ D + +R Q L + + I+ + +L Sbjct: 214 NESSSMKDRLQTMRHHAIRRNRQADLLANAIAESPYPVIVCGDFNDIPASYVYRKISRSL 273 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 + G +RID+ + SP Sbjct: 274 QDCFLQAGRTWKGSYQRWGDF----------------------LRIDYTLCSPAF----- 306 Query: 238 SARIDTKPRGWTKPSDH 254 +++ SDH Sbjct: 307 --QVNCYQLVSNPWSDH 321 >gi|254476088|ref|ZP_05089474.1| endonuclease/exonuclease/phosphatase [Ruegeria sp. R11] gi|214030331|gb|EEB71166.1| endonuclease/exonuclease/phosphatase [Ruegeria sp. R11] Length = 331 Score = 41.7 bits (96), Expect = 0.10, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 20/54 (37%), Gaps = 12/54 (22%) Query: 223 IDHIMLSPEATSL---------LHSARIDTKPRGWT---KPSDHTPVIVSLDIP 264 +D+IMLSP A + SDH PV + +D+P Sbjct: 278 LDYIMLSPGLMRHQPRWRIWHPFEDAACYEDAPLREALLQASDHFPVSLDIDLP 331 >gi|255014286|ref|ZP_05286412.1| hypothetical protein B2_10271 [Bacteroides sp. 2_1_7] Length = 268 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 35/259 (13%), Positives = 78/259 (30%), Gaps = 31/259 (11%) Query: 22 AAWIKENNPDIICLQETKTEDKN------FPFETLQSLNYHIETCGQKSYN-------GV 68 A I+ + DI+ +QE +++ P E +SL +H+ G+ Y Sbjct: 14 AKVIEASQTDIVGIQEGHIYEEDGIKHDHVP-EIAESLGFHLFNQGEGHYILSRYPVVDS 72 Query: 69 AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKI 128 I++ + +I ++ + + Sbjct: 73 TASRYGVKIQVGKDKFCWMFNCHLYYIPYQPYQLNGIPYGDYPFIDTEEEAVWFANEARR 132 Query: 129 SWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN 188 + R+ + Q ++ P+ GD+N + + + + Sbjct: 133 EEVTRYQKDIQQVMKEGYPVFLTGDFNEP--SFLDWTQRAADAGIHKIKVEWPATKAFSE 190 Query: 189 MGFTDAIRATHDTH---HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI---- 241 +G D+ R H Y++ ++ + R+D ++ S + + I Sbjct: 191 IGMNDSYRTIHPDEVSTPGYTWTPVPSEQEILD---RLDFVLYSG---CKVTDSFITGES 244 Query: 242 --DTKPRGWTKPSDHTPVI 258 + PSDH V Sbjct: 245 EATSDVVVSPYPSDHRMVT 263 >gi|257068283|ref|YP_003154538.1| metal-dependent hydrolase [Brachybacterium faecium DSM 4810] gi|256559101|gb|ACU84948.1| metal-dependent hydrolase [Brachybacterium faecium DSM 4810] Length = 316 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 5/43 (11%) Query: 1 MSVVTVATWNV-NSI----RARIHNLAAWIKENNPDIICLQET 38 M+ VAT+N+ + + R + LA I + D+I LQE Sbjct: 1 MTSWRVATFNIRHGLGPDERVDLPRLAGQIAALDADVIGLQEV 43 >gi|254509674|ref|ZP_05121741.1| endonuclease/exonuclease/phosphatase family protein [Rhodobacteraceae bacterium KLH11] gi|221533385|gb|EEE36373.1| endonuclease/exonuclease/phosphatase family protein [Rhodobacteraceae bacterium KLH11] Length = 333 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 21/53 (39%), Gaps = 12/53 (22%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKP------------SDHTPVIVSLDI 263 +D+IM+S + + RI R SDH PV + +D+ Sbjct: 281 LDYIMISTDLRDRHPNWRIWHPFRDTDCWGNPELREALLTASDHFPVTLDIDL 333 >gi|116182486|ref|XP_001221092.1| hypothetical protein CHGG_01871 [Chaetomium globosum CBS 148.51] gi|88186168|gb|EAQ93636.1| hypothetical protein CHGG_01871 [Chaetomium globosum CBS 148.51] Length = 574 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 40/321 (12%), Positives = 79/321 (24%), Gaps = 65/321 (20%) Query: 6 VATWNVNSI-------RARIHNLAAWIKEN--NPDIICLQETKTEDK--NFPFETLQSLN 54 + T N + R R+ + + P I+ LQE T++ + E L Sbjct: 10 LVTLNCWGLKYISKLRRERLTEIGRQLATASPQPHIVALQECFTQEDYQSIRHEVRFILP 69 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ---------- 104 Y G+AILS++ E + + A + + Sbjct: 70 YGKFYHSAAFGGGLAILSRWPIEESTMYRYPLNGRPTAFWRGDWYVGKGIACAKIRYGPA 129 Query: 105 ------TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP 158 G + + + + E ++ GD+N+IP Sbjct: 130 AKQVVEVFNTHTHAPYEGGKPNDSYLCHRTAQSWEMAKLLRGAAERGHLVLAMGDFNMIP 189 Query: 159 QPHD-------------CYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY 205 + + ++ + + + Y Sbjct: 190 MSREYQLITGLAPVSDVWRTLHPDSSLGPSHHPAEEARHRPVPTAEFNIQENGAASDGPY 249 Query: 206 SFWDYY----------------ADSWSKNKGIRIDHIMLSPEATSLLHSAR--------- 240 + W + + G R+D+I S L Sbjct: 250 NTWRWTKAQQKLLGPGKPPVTVSPDTPDPLGKRLDYIFASSGDAMALGGTWEVEQANVGM 309 Query: 241 IDTKPRGWTKPSDHTPVIVSL 261 + P SDH + +L Sbjct: 310 MMRHPELGCSLSDHFSIEATL 330 >gi|254522846|ref|ZP_05134901.1| endonuclease/exonuclease/phosphatase family protein [Stenotrophomonas sp. SKA14] gi|219720437|gb|EED38962.1| endonuclease/exonuclease/phosphatase family protein [Stenotrophomonas sp. SKA14] Length = 291 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 37/274 (13%), Positives = 77/274 (28%), Gaps = 34/274 (12%) Query: 4 VTVATWNVNSIRA------------RIHNLAAWIKENNPDIICLQE-TKTEDKNFPFETL 50 + V ++NV R R + I + +P +I QE K + E L Sbjct: 37 LKVMSFNV---RTPADTEPGKRWPDRRDAMVKVILDAHPAVIGTQELVKEQADYL-SEHL 92 Query: 51 QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 + E S + + + + L + N + Sbjct: 93 PGYRWFGEGRRGGSGDEHMGVFYDSKVLAIEASGNFWLSDTPDVPGSITWGNLYPRMVTW 152 Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170 + R + ++ + +P + Sbjct: 153 ALFRRLEDGRRFYF----MDTHLPYRDEDEPRRVKGAELIGKRLATLPADLPVVLTGDF- 207 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230 ++ E ++F ++ T +F D+ + + +D +++ Sbjct: 208 -NSEPGGETYKAFTRVLQDTRTQVKAPQGPRL---TFHDFTGKATVQ-----LDWVLV-R 257 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 T+ S D + PSDH P++V LD P Sbjct: 258 GFTAR--SFLTDDRRIDGVLPSDHFPLVVELDWP 289 >gi|147859354|emb|CAN83946.1| hypothetical protein VITISV_043666 [Vitis vinifera] Length = 1352 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 23/236 (9%), Positives = 67/236 (28%), Gaps = 28/236 (11%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLP 84 ++ D++C ETK ++ + + + ++ Sbjct: 492 VRAQKADLVCFLETKVQE---------------MSLKMVKSLXTGRFTDWGXVDAGGASX 536 Query: 85 GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL 144 G + +E I + + + + + + + Sbjct: 537 GILIFWDNXVLELLELERGV-FTISGXFRNVEDG-----FVWVFTGVXGPVLLREKEEFW 590 Query: 145 EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL 204 E+ G ++ +N I + + L + ++ + +++ + Sbjct: 591 EKLDAIKGLWDDPWCXGGDFNSIRFLGERRNGLNLTXEMRRFSEVIEEFSLKDLPSSXGX 650 Query: 205 YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 ++++ + R+D ++S E PR SDH P+ + Sbjct: 651 FTWY----GGLNSQAASRLDRFLISNEWEDHFSGVFQSALPR---IVSDHCPISLE 699 >gi|110835509|ref|YP_694368.1| hypothetical protein ABO_2648 [Alcanivorax borkumensis SK2] gi|110648620|emb|CAL18096.1| conserved hypothetical protein [Alcanivorax borkumensis SK2] Length = 300 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 42/286 (14%), Positives = 76/286 (26%), Gaps = 65/286 (22%) Query: 3 VVTVATWNV-NSI--------------------RAR--IHNLAAWIKENNPDIICLQETK 39 V + ++N+ I R+ I +A + ++ D++ LQE Sbjct: 42 TVKLMSFNIQAGIGSQKFGDYITGSWKHLVAHPRSVETIEQIAQVL--SHFDVVGLQEV- 98 Query: 40 TEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF 99 D + ++ N + L+ + +L +F F Sbjct: 99 --DGG--------------SLRSRNMNQLVHLASMAGFPVWHQQLNRNLGRFGQFSNG-F 141 Query: 100 TINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159 Q I + LP + + A L + + Sbjct: 142 LSRHQPFEITDHRLPGLPGRGAIVIKYGHPIQPLVVVVAHLALGEKVRNTQLSYLARLLA 201 Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK 219 + + N L+ D + S+ Sbjct: 202 DYKYVVVMGDFNCRLNHLDHSPLAALGLQTVRADNLNTYP------SWAPDRH------- 248 Query: 220 GIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 IDHI+LSPE S T+ SDH P+ + IP+ Sbjct: 249 ---IDHILLSPELESR------HTRVLSDCLLSDHLPLATEIIIPD 285 >gi|326427499|gb|EGD73069.1| hypothetical protein PTSG_04783 [Salpingoeca sp. ATCC 50818] Length = 390 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 41/273 (15%), Positives = 62/273 (22%), Gaps = 38/273 (13%) Query: 17 RIHNLAAWIKENNPDIICLQETKTED-KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75 R L I DI L E + F Y + C + Sbjct: 72 RSPLLRDEIARIRADIFGLAE--CNEFDTFWEPMFAEEGYDVVYCAKSKSPAQRFGGTAD 129 Query: 76 PIEIVTHLP--------GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDK 127 I D A + Q L + +L G + Sbjct: 130 GCCIAVRRDRFRVVSKLQRDDAPVAVAAQLLDITTQQHLLVCMCHLKSGRTFGDMRSAQM 189 Query: 128 ISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQ 187 + F I GD+N C +V+ Sbjct: 190 EMLLASISEFEEGLSRPCPTAIMLGDFNA-HSDEMCVTMCEEAGFTKVFSDVKHYPWTTW 248 Query: 188 NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI---DTK 244 + + ++ IDHI+ P + L S D + Sbjct: 249 KYRHGPSADPKDEVEQKHT----------------IDHILARP--ATRLVSYLALPSDDE 290 Query: 245 PR-----GWTKPSDHTPVIVSLDIPEPRKKQQD 272 T PSDH V V + R+ +D Sbjct: 291 VTQGCFPSATFPSDHVSVAVRIAWGPNREGSED 323 >gi|124360676|gb|ABN08665.1| reverse transcriptase - beet retrotransposon, putative [Medicago truncatula] Length = 152 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 19/40 (47%), Gaps = 2/40 (5%) Query: 4 VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTE 41 + + + N+ + A + + E ++CLQETK E Sbjct: 1 MKILSVNIRGLGAPEKRREIHRLVAERKLTVLCLQETKLE 40 >gi|325474697|gb|EGC77883.1| endonuclease/exonuclease/phosphatase [Treponema denticola F0402] Length = 342 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 33/262 (12%), Positives = 68/262 (25%), Gaps = 54/262 (20%) Query: 30 PDIICLQET--KTEDKNFPFETLQSLNYHIETCGQKSYNGVAI--------LSKYQPIEI 79 PDI+ LQE + +F + +Y G +++ + I Sbjct: 104 PDILVLQEIESRAVIDDFCKILPMNNSYKYAVFIPPQNGGAFSTALLSKFPITETKVFNI 163 Query: 80 VTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFAS 139 + ++ R T + + + + + + + Sbjct: 164 YSGKRSLRPLIETRIRIGNSTGDNELVLLNVHWKSKVGDSDTDSIRRQQEEQAYKRLKEL 223 Query: 140 QRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH 199 + E + P I GD+N + + + + A + + Sbjct: 224 KASEPQTPFIICGDFNQTLEEFSLLSEFDNCWNI---------------EAYRAAAQEGN 268 Query: 200 DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS------ARID----------- 242 Y +Y +SW IDH S + + I+ Sbjct: 269 QPEGSY----FYKESWEG-----IDHFFYSDNLSDG-KNFDLSFFCVINLKPLTDTSGKP 318 Query: 243 --TKPRGWTKPSDHTPVIVSLD 262 SDH P+ + L Sbjct: 319 DKYSVYSGKGYSDHLPIGIILK 340 >gi|224498832|ref|ZP_03667181.1| hypothetical protein LmonF1_03653 [Listeria monocytogenes Finland 1988] Length = 256 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 3/58 (5%) Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 SF D+ N+ +ID+I +S E + + SDH PV +LD Sbjct: 201 SFHDFRPL-RPINELEKIDYIFVSEEF--QVCTYETIVDEVDGFSASDHFPVTANLDW 255 >gi|163801984|ref|ZP_02195880.1| putative phospholipase C precursor [Vibrio sp. AND4] gi|159174125|gb|EDP58933.1| putative phospholipase C precursor [Vibrio sp. AND4] Length = 442 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 37/284 (13%), Positives = 79/284 (27%), Gaps = 45/284 (15%) Query: 4 VTVATWNVNSIRARIHNLAA-------WIKENNPDIICLQETKTE-DKNFPFETLQSLNY 55 + + T+N+ ++ A ++ ++K D++ LQE + + F E + Y Sbjct: 178 LNLMTYNIWALPAVASHIDDRYELIPSYVK--GFDVVALQEVFADGREAFLRELAKEYPY 235 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + + +N + + + I + Sbjct: 236 QTKMLDKDGFNIHDGGVTIVSRYPIVNQAQYVFPDCSSADCLADKG------INYAEIIK 289 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 G ++ + + ++ + ++ A NI Y+ N F Sbjct: 290 GGQA-YHIFNTHAASSDTEIAREHRQRQFKQMRAMAQSLNIPSNETVVYSGDFNVNKLKF 348 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR----------IDH 225 + + A + Y+ + D N R +D+ Sbjct: 349 PDDY---------QQMIANLSAIEPEYSGYT--ESTFDPRINNFAGRTFSGDGSVEYLDY 397 Query: 226 IMLSPEATSLLHSARIDTKPRGWT-------KPSDHTPVIVSLD 262 +M+S E + PR SDH PV L Sbjct: 398 VMVSNEYGIKSQNDNYVDVPRSTAASIWQHYNLSDHFPVSTVLK 441 >gi|110346936|ref|YP_665754.1| endonuclease/exonuclease/phosphatase [Mesorhizobium sp. BNC1] gi|110283047|gb|ABG61107.1| Endonuclease/exonuclease/phosphatase [Chelativorans sp. BNC1] Length = 326 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 39/235 (16%), Positives = 63/235 (26%), Gaps = 35/235 (14%) Query: 30 PDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLD 89 DI+ LQE + + S S+ L Sbjct: 127 ADILVLQE---------------MTPRWQDALAASGIWPFESSRDLHANTDMKLFSRFPI 171 Query: 90 VQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLI 149 + AR + + L + + R R S L Sbjct: 172 LTARTVSPDSADTGGRFAVRYELLVGARTLIVYAVHPQTPRSPRMWRERSAYL-----RD 226 Query: 150 FAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWD 209 A P W N A ++ + L + G+ + + Sbjct: 227 LAQALRSEPHDTPVVVAGDW-NTASWSPFFKDL---LSSTGYRTTESRWWPLP---TRFS 279 Query: 210 YYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 SW++ G ID I+L+P +D+ G S+H PVI L +P Sbjct: 280 IRFGSWTQ-LGTPIDRIVLTPA-------VGLDSLAMGPKFGSNHLPVIARLTLP 326 >gi|149922986|ref|ZP_01911405.1| endonuclease/exonuclease/phosphatase family protein [Plesiocystis pacifica SIR-1] gi|149816172|gb|EDM75681.1| endonuclease/exonuclease/phosphatase family protein [Plesiocystis pacifica SIR-1] Length = 236 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 33/246 (13%), Positives = 64/246 (26%), Gaps = 29/246 (11%) Query: 14 IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSK 73 +RA + +AAWI E N D+ C+QE + ++ VA L++ Sbjct: 13 LRANLRGIAAWIAEANADLACVQE-----------------ADASSWWSGRFDHVAFLAQ 55 Query: 74 YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKR 133 + + VT D + Sbjct: 56 HSGLPYVTRACNVDGGGLRYGTALLSRWPLEQAWAHTFAPTPPTFRKGFVISSLRWPGAP 115 Query: 134 FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTD 193 L F + + + A + + + Sbjct: 116 ELEFDVVSVHTDFARASQRRRQVRELAALIRQRGRPVIVAGDLNSDWREGGATRLLARDL 175 Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253 + A T + +F S ++ R+D +++S A + SD Sbjct: 176 ELEAFEPTGPMVTF---PGPGPSPDR--RLDWVLISKAFEFSGVEAV-------DLRLSD 223 Query: 254 HTPVIV 259 H P++ Sbjct: 224 HRPLLA 229 >gi|134093694|ref|YP_001098769.1| hypothetical protein HEAR0422 [Herminiimonas arsenicoxydans] gi|133737597|emb|CAL60640.1| putative DNase I-like [Herminiimonas arsenicoxydans] Length = 337 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 47/335 (14%), Positives = 79/335 (23%), Gaps = 60/335 (17%) Query: 4 VTVATWNVNSIRARIHNL-----------------AAWIKEN----NPDIICLQET---- 38 + A++NV + + WI + + D+I LQE Sbjct: 5 LRFASFNVC--NLALPGMKYYDDQIPYSSEEYDVKINWIAQQLDRLDADVIGLQEIFSQD 62 Query: 39 -------KTE---DKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDL 88 KT+ D L H+ E+ +L Sbjct: 63 ALKDVLAKTQNYRDAQLIGFDPDPLTDHLTPSVALISRLPVSPGAVIYTELPNNLSVTLP 122 Query: 89 DVQARFIEATFTINTQTLRI-GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEP 147 V T I T+ I +L +K D + + L Sbjct: 123 GVHHPVSRFTRPILHATIEIAPDLLTHVFVCHLKSKLPDYRNDNNDDHPDQAGIAMLRSL 182 Query: 148 LIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF 207 + D + N + M F Sbjct: 183 IRRGTDALGLRTLLSNVNKKKRLPIIVMGDFNDVASAIPTQMVMGLGKYPLDGIDDRL-F 241 Query: 208 WDYYADSWS---KNKGI---------RIDHIMLSPEATSL-------LHSARIDTKPRGW 248 Y S ++ G IDHI++S E + + Sbjct: 242 ESYRIQSRRDALRDVGYTHVHDGIYETIDHILVSEEFNPASRAAIGEVAEVMYLNDHMTF 301 Query: 249 TKP--SDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 +P SDH V+V + + S+ P+ Sbjct: 302 KQPQASDHGLVLVRILLHGKSLPDTTSSGMPDVPL 336 >gi|115908401|ref|XP_001201354.1| PREDICTED: similar to RP1-30M3.3 [Strongylocentrotus purpuratus] gi|115935692|ref|XP_001196610.1| PREDICTED: similar to RP1-30M3.3 [Strongylocentrotus purpuratus] Length = 242 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 19/42 (45%), Gaps = 5/42 (11%) Query: 2 SVVTVATWNVNSI--RARIHN---LAAWIKENNPDIICLQET 38 ++ + +WN++ + R I + PD++ LQE Sbjct: 25 NIFRLMSWNIDGLDERNAEERTGAACDTIMKLAPDVVFLQEV 66 >gi|109390630|emb|CAJ13343.1| pol protein [Drosophila sechellia] Length = 903 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 21/167 (12%), Positives = 49/167 (29%), Gaps = 6/167 (3%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 + + + WN I + + L A+IK+ I+ + ET+ E L +H Sbjct: 11 FNTLKIGYWNACGITNKTNELGAYIKKEGIQIMLVTETRLERN---SNALNFKGFHTYLA 67 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + + + + ++ F+++ + RI Sbjct: 68 QNPTSHRKGGTATIINQNV---RHTCLNPIETDFLQSAPIALIPSSRIRANMTIVAPIYC 124 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167 + + L+ + + GD+N + Y Sbjct: 125 PPVFKWTTEQFSKLFNHFDMLLDGKTKFVLGGDWNCKHRLWGNYLSC 171 >gi|325983079|ref|YP_004295481.1| endonuclease/exonuclease/phosphatase [Nitrosomonas sp. AL212] gi|325532598|gb|ADZ27319.1| Endonuclease/exonuclease/phosphatase [Nitrosomonas sp. AL212] Length = 250 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 30/271 (11%), Positives = 68/271 (25%), Gaps = 37/271 (13%) Query: 4 VTVATWNV-------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56 + V T+N+ N +R +H + +++ + DI+ LQE E + N Sbjct: 6 LKVLTYNIHKGFSATN-LRFILHEIKNFLRHIDADIVFLQEVHGER--------RISNQR 56 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 + + + + + I + + L Sbjct: 57 FDNWPNTQQFEFLADQVWHHYAYGKNAIYNSGHHGNAILSKYPIIEWDNINVSMLRSASR 116 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + + + + + E + I P+I D Sbjct: 117 SLLHGVISIPETNQKIHIICIHFGLFGHERKRQLSALVKRISTHVSASEPLIIAGDFNDW 176 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLY-SFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E + + + ++ + +G+ I Sbjct: 177 REQAEHYLHRDLGVKEVFKITRGAYARTFPAWMPVLSMDRIYYRGLDI------------ 224 Query: 236 LHSARIDTKPRG---WTKPSDHTPVIVSLDI 263 ID W + SDH P++ + Sbjct: 225 -----IDCNRLHGQPWHRLSDHIPLLAEFRL 250 >gi|85714027|ref|ZP_01045016.1| Endonuclease/exonuclease/phosphatase [Nitrobacter sp. Nb-311A] gi|85699153|gb|EAQ37021.1| Endonuclease/exonuclease/phosphatase [Nitrobacter sp. Nb-311A] Length = 226 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 5/41 (12%) Query: 3 VVTVATWNVNS---IRAR--IHNLAAWIKENNPDIICLQET 38 + V TWNV+ + R I +A+ I+ +PDI+ LQE Sbjct: 4 TIRVMTWNVHGTFNLNPRFDIEAVASIIRRWSPDIVGLQEI 44 >gi|325498038|gb|EGC95897.1| hypothetical protein ECD227_2135 [Escherichia fergusonii ECD227] Length = 242 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 31/251 (12%), Positives = 59/251 (23%), Gaps = 26/251 (10%) Query: 15 RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN--YHIETCGQKSYNGVAILS 72 R + L ++ + DI+CLQE +++ H E ++ A Sbjct: 16 RFILPELRDAVRTVSADIVCLQEV-MGAHEVHPLHVENWPDTSHYEFLADTMWSDFAYGR 74 Query: 73 KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIK 132 E + +++ R + + Sbjct: 75 NAVYPEGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVPPMTGKAIHVMCVHLGL 134 Query: 133 RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192 R +Q L E + D + D + N + Sbjct: 135 REAHRQAQLAMLAEWVNELPDGEPVLVAGDFNDWRQKANHPLKVQAGLDEIFTRAHGRPA 194 Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPS 252 +R+D I + + SA R W S Sbjct: 195 RTFPVQFPL-------------------LRLDRIYV----KNASASAPTALPLRTWRHLS 231 Query: 253 DHTPVIVSLDI 263 DH P+ + + Sbjct: 232 DHAPLSAEIHL 242 >gi|151945993|gb|EDN64225.1| RNase [Saccharomyces cerevisiae YJM789] Length = 515 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 28/192 (14%), Positives = 49/192 (25%), Gaps = 3/192 (1%) Query: 17 RIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNY--HIETCGQKSYNGVAILSK 73 R L K N D+ICLQE + ++F + L Y K++ + + Sbjct: 142 RSKVLLNEFKYYNSDVICLQEIDHIQFQSFWKDEFSKLGYDGQYYRNATKNHGVAIMWRR 201 Query: 74 YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKR 133 ++ L D + T T N + + + I Sbjct: 202 ELFHQVDKMLIDYDKESSESISARTTTNNVGLVLALKFSEKVLSNLGKKSSKKCGILIGT 261 Query: 134 FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTD 193 F E + + N + END + + F Sbjct: 262 THLFWHPFGTYERTRQCYIVLKKMKEFMHRVNVLQNENDGDLSHWFPFFCGDFNSQPFDT 321 Query: 194 AIRATHDTHHLY 205 + Y Sbjct: 322 PYLSMTSKPVHY 333 >gi|242057665|ref|XP_002457978.1| hypothetical protein SORBIDRAFT_03g024493 [Sorghum bicolor] gi|241929953|gb|EES03098.1| hypothetical protein SORBIDRAFT_03g024493 [Sorghum bicolor] Length = 390 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 41/264 (15%), Positives = 78/264 (29%), Gaps = 42/264 (15%) Query: 6 VATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + WN+ + A+ + + I E++ I+CLQETK E+ +L Sbjct: 5 ILVWNIRGLNSQAKWDAIRSKIDESSCQILCLQETK-------RESFNNL---------- 47 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 Y HL TI L G++ +G IT Sbjct: 48 ----------YLKKFCPRHLNRFAFSPSIGASGGIITIWNGKLFDGSVVHSNGYCITIKF 97 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + + + N+ + D + N T + Sbjct: 98 LNKLDNSTFHLTNVYGPSQSDAKMAFITWLLNVDTEELDDWILAGDFNLYRSTENRNKPG 157 Query: 184 QKLQNMGFTDAIRATHD------THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 M + + + D +++ ++ + I++D + SP + Sbjct: 158 GDAIEMQLFNDLISALDLLELPFNGRTFTW----SNMQADPLLIKLDWVFCSPSWSWTHP 213 Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261 S I R SDH P +++ Sbjct: 214 STEIQPLDR---PISDHIPFVITF 234 >gi|134101851|ref|YP_001107512.1| endonuclease/exonuclease/phosphatase family protein [Saccharopolyspora erythraea NRRL 2338] gi|133914474|emb|CAM04587.1| endonuclease/exonuclease/phosphatase family [Saccharopolyspora erythraea NRRL 2338] Length = 312 Score = 41.7 bits (96), Expect = 0.11, Method: Composition-based stats. Identities = 33/258 (12%), Positives = 70/258 (27%), Gaps = 29/258 (11%) Query: 22 AAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81 A+++ + D+ +QET + E L +H G + + + + Sbjct: 58 EAFVRSSGADVFGMQET---EGTLADELAGRLGWHSYQTGDVALLSRYPIVERFQSRVGV 114 Query: 82 HLPGDDLDVQARFIEATFTINTQ------TLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135 D + + T +S + D+ +++ Sbjct: 115 GARLQLDDGRQAVVWTVHLNYTPYGPYDACFDHMTPQQILDREESSGRVDEIRETLEKMA 174 Query: 136 RFASQRLELEEPLIFAGDYN-IIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDA 194 Q P+ GD+N + F +A Sbjct: 175 PQIEQARAGGAPVFLTGDFNAPSHLDWTGAAQDSHCGYTVQWPTSVAVAEAGLADSFREA 234 Query: 195 IRATHDTHHLYSFWDYYADSWSKNKGI--------RIDHIMLSPEATSLLHSARID---- 242 T ++ + + K+ G RID + + A ++ +A + Sbjct: 235 NADPVATPGN-TW----SPVYPKHDGSTGADEPQDRIDFVHHAGSARTVSSTAEVRGEPA 289 Query: 243 --TKPRGWTKPSDHTPVI 258 G P+DH V+ Sbjct: 290 PVPDHAGNEWPTDHAAVV 307 >gi|167562541|ref|ZP_02355457.1| endonuclease/exonuclease/phosphatase family superfamily protein [Burkholderia oklahomensis EO147] Length = 171 Score = 41.7 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 15/38 (39%), Gaps = 4/38 (10%) Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 D ++ L ID G + SDH P+ + L Sbjct: 135 DFAFVTDTLIGRLSRCEID----GAVRASDHQPIALEL 168 >gi|108757277|ref|YP_635313.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus xanthus DK 1622] gi|108461157|gb|ABF86342.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus xanthus DK 1622] Length = 996 Score = 41.7 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 27/74 (36%), Gaps = 14/74 (18%) Query: 219 KGIR--------IDHIMLSPEATSLLH--SARIDTK----PRGWTKPSDHTPVIVSLDIP 264 +G+R IDH ++S E + S I P SDH PVI S D+ Sbjct: 767 RGLRTTVDYPDAIDHTLVSNELAANYLPGSVEILRPDAWIPNYGDIVSDHYPVISSYDLG 826 Query: 265 EPRKKQQDSTSQNM 278 + N+ Sbjct: 827 DSGGVTDPEPLSNL 840 >gi|158315736|ref|YP_001508244.1| endonuclease/exonuclease/phosphatase [Frankia sp. EAN1pec] gi|158111141|gb|ABW13338.1| Endonuclease/exonuclease/phosphatase [Frankia sp. EAN1pec] Length = 470 Score = 41.7 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 42/282 (14%), Positives = 76/282 (26%), Gaps = 30/282 (10%) Query: 16 ARIHNLAAWIKENNPDIICLQET------------KTEDKNFPF--ETLQS--LNYHIET 59 AR +A + PD++ LQE +T P + L+ LNY + Sbjct: 160 ARAQAIAKLLARQRPDVLGLQEVALWQEGPIGGPLRTTVDYLPILQKALKERGLNYEVAA 219 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDD--LDVQARFIEATFTINTQTLRIGNLYLPHGN 117 + I + Q + + + L + P Sbjct: 220 ENTNFSGQLPISATRQVRFTDHDAILVRTGIPGRWQVSHPESHEYVARLTLPTAAGPFTI 279 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + D + + + I+ + Sbjct: 280 TRGWSAVDVTARGKTVRVANTHLEPVSPQVRNAQANELYSALVTATRPVILLGDLNSQPS 339 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP-----EA 232 ++ + G+TDA H ++ D RID+++ P Sbjct: 340 DLTGPYGLFTQGGYTDAWATIHGPDGGFTATQIELDVMPSTLDRRIDYVLYQPTRPEHSD 399 Query: 233 TSLLHSAR---IDTKPR----GWTKPSDHTPVIVSLDIPEPR 267 + +AR I K R PSDH V+ +L + R Sbjct: 400 LEQVRAARATVIGNKLRDRTPSGLWPSDHAGVVAALTVSHQR 441 >gi|325287411|ref|YP_004263201.1| Endonuclease/exonuclease/phosphatase [Cellulophaga lytica DSM 7489] gi|324322865|gb|ADY30330.1| Endonuclease/exonuclease/phosphatase [Cellulophaga lytica DSM 7489] Length = 279 Score = 41.7 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 30/264 (11%), Positives = 73/264 (27%), Gaps = 26/264 (9%) Query: 7 ATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57 T+N+ N+ R +AA I+ +P + +QE + NY+ Sbjct: 28 MTYNIKYDNTSDTINNWNFRKAKMAALIQHYSPSFLGIQE--GLHNQVSYLDSNLPNYNY 85 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 G+ S + + + + + Sbjct: 86 IGVGRDDGKQKGEYSAIYYNKNNFKVIKSNTFWLSTTPNKISVGWDAAME-RICTYGLFQ 144 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + +Y + + +++ + + + N P + T Sbjct: 145 HKKTKQYYWVFNAHFDHIGVEARKNSAKLIVEKIKNLNTKNYPVILMGDF----NVTPTT 200 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 E + +T+++ + ++ + RID++ + Sbjct: 201 EAITTITNYIPDSYTNSLTTPYGPKGTFNGFTNRILDH------RIDYVFA-KNL--NVL 251 Query: 238 SARIDTKPRGWTKP-SDHTPVIVS 260 S ++ K SDH PV+ + Sbjct: 252 SVKVIDDRLDNNKHISDHLPVLAT 275 >gi|111222155|ref|YP_712949.1| hypothetical protein FRAAL2735 [Frankia alni ACN14a] gi|111149687|emb|CAJ61379.1| hypothetical protein; putative DNase I-like domain [Frankia alni ACN14a] Length = 281 Score = 41.7 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 3/41 (7%) Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 RID I ++ + + P SDH V+V LD Sbjct: 231 RIDQIWVTTPLAPAVIGYTVLDTP---EGASDHHGVMVELD 268 >gi|167521495|ref|XP_001745086.1| hypothetical protein [Monosiga brevicollis MX1] gi|163776700|gb|EDQ90319.1| predicted protein [Monosiga brevicollis MX1] Length = 586 Score = 41.7 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 18/49 (36%), Gaps = 10/49 (20%) Query: 223 IDHIMLSPEATSLLHSARI-------DTKPRGWTK---PSDHTPVIVSL 261 IDHI +S A + + R + PSDH P+ L Sbjct: 537 IDHICVSRALFQTTRRAGVAHELFEQFSDARLEGRARHPSDHRPIWADL 585 >gi|322488807|emb|CBZ24054.1| conserved hypothetical protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 645 Score = 41.7 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 19/113 (16%), Positives = 34/113 (30%), Gaps = 18/113 (15%) Query: 4 VTVATWNVNSI-----R-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57 + V ++N+ I R AR+ A K + D+I LQE F E + H Sbjct: 14 IRVLSFNLWGIFNSKMREARMKAFAT--KIEHYDVILLQE------QFSAEDFDLIFQHA 65 Query: 58 ETCGQKSYNGVAILSKY----QPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 Q++Y S + + + ++ Sbjct: 66 SPVVQRTYTFRRFCSSFYGSGCAVISRYPICQAFFHTFPLQGCPEMVLHGDFF 118 >gi|260800722|ref|XP_002595246.1| hypothetical protein BRAFLDRAFT_142827 [Branchiostoma floridae] gi|229280490|gb|EEN51258.1| hypothetical protein BRAFLDRAFT_142827 [Branchiostoma floridae] Length = 114 Score = 41.7 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 23/40 (57%), Gaps = 2/40 (5%) Query: 2 SVVTVATWNVNSI--RARIHNLAAWIKENNPDIICLQETK 39 + +++ + NV + + + +L +++K DII LQET Sbjct: 1 NDISLLSLNVRGLLEKNKRRSLLSYVKNQKADIIFLQETH 40 >gi|238060298|ref|ZP_04605007.1| endonuclease/exonuclease/phosphatase [Micromonospora sp. ATCC 39149] gi|237882109|gb|EEP70937.1| endonuclease/exonuclease/phosphatase [Micromonospora sp. ATCC 39149] Length = 238 Score = 41.7 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 3/45 (6%) Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 RID + + P T + + P+ + SDH P++V L +P Sbjct: 195 RRIDAVFVDPRIT--VVDYDVVDTPQAR-RASDHFPIVVDLLLPA 236 >gi|299752303|ref|XP_002911744.1| glucose-repressible alcohol dehydrogenase transcriptional effector [Coprinopsis cinerea okayama7#130] gi|298409772|gb|EFI28250.1| glucose-repressible alcohol dehydrogenase transcriptional effector [Coprinopsis cinerea okayama7#130] Length = 684 Score = 41.7 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 22/53 (41%), Gaps = 1/53 (1%) Query: 17 RIHNLAAWIKENNPDIICLQETK-TEDKNFPFETLQSLNYHIETCGQKSYNGV 68 R H + I E+ DIICLQE + ++F L+ Y + + Sbjct: 342 RKHQIMKEITEHGTDIICLQEVDIAQYEDFFSRDLEEHGYAGAYHPKSRSRTI 394 >gi|58040215|ref|YP_192179.1| hypothetical protein GOX1784 [Gluconobacter oxydans 621H] gi|58002629|gb|AAW61523.1| Hypothetical protein GOX1784 [Gluconobacter oxydans 621H] Length = 280 Score = 41.7 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 18/46 (39%), Gaps = 4/46 (8%) Query: 223 IDHIMLSPEATSLLH----SARIDTKPRGWTKPSDHTPVIVSLDIP 264 IDHI+L A L SDH PV V L++P Sbjct: 235 IDHILLGNAARDWLVPDSLRVMTYKNDTVPAGLSDHCPVSVRLEMP 280 >gi|308454513|ref|XP_003089877.1| hypothetical protein CRE_23222 [Caenorhabditis remanei] gi|308267978|gb|EFP11931.1| hypothetical protein CRE_23222 [Caenorhabditis remanei] Length = 1147 Score = 41.7 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 37/252 (14%), Positives = 68/252 (26%), Gaps = 45/252 (17%) Query: 10 NVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVA 69 N NSI ++ L + N D+ CL ETK D +F L + + ++ +G Sbjct: 242 NCNSISNKLSKLDLLCEYYNFDVFCLSETKL-DDSFTDSLLSINDNYSILRKDRNRHGGG 300 Query: 70 ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKIS 129 + + A T+RI Y P+ ST +D Sbjct: 301 VGILIAKHIRFVPVDLPASSQSAEVCAIDIFAGGTTIRIITAYHPNHGHCKSTLFD---- 356 Query: 130 WIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNM 189 L + + GD+N+ + + ++ Q++ Sbjct: 357 -------TLEYLLIPGKHTVLLGDFNMPCIDWN--LLSAPDKACSDFVDFVVKHGLTQSV 407 Query: 190 GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT 249 + +D + + I + Sbjct: 408 KSPTRFNPENI----------------------LDLCL---------SNTGIISDVSVGD 436 Query: 250 KPSDHTPVIVSL 261 SDH + V L Sbjct: 437 LFSDHCLIKVVL 448 >gi|188584137|ref|YP_001927582.1| endonuclease/exonuclease/phosphatase [Methylobacterium populi BJ001] gi|179347635|gb|ACB83047.1| Endonuclease/exonuclease/phosphatase [Methylobacterium populi BJ001] Length = 259 Score = 41.7 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 31/78 (39%), Gaps = 14/78 (17%) Query: 5 TVATWNVNSIR---ARIHNLAAWIKENNPDIICLQE-TKTEDKNFPFETLQSL--NYHIE 58 + +WN+ +R A + L I++ PD++ +QE TK L+ + Sbjct: 19 KIVSWNL--LRRTGAAVDCLVTLIEQERPDLLLMQEATK------EIAALKDRVGGVYAW 70 Query: 59 TCGQKSYNGVAILSKYQP 76 +G+A+ S Sbjct: 71 AQLPGRIHGLAMWSPIPW 88 >gi|147827031|emb|CAN59992.1| hypothetical protein VITISV_009778 [Vitis vinifera] Length = 1670 Score = 41.7 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 20/40 (50%), Gaps = 2/40 (5%) Query: 4 VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTE 41 + + +WNV ++ + A I+ D+ C+QE K + Sbjct: 587 LRLLSWNVRGANDSSKRKVIKAMIRSQRVDLFCIQEXKIQ 626 >gi|227877707|ref|ZP_03995743.1| endonuclease-exonuclease-phosphatase family protein [Lactobacillus crispatus JV-V01] gi|227862695|gb|EEJ70178.1| endonuclease-exonuclease-phosphatase family protein [Lactobacillus crispatus JV-V01] Length = 339 Score = 41.7 bits (96), Expect = 0.12, Method: Composition-based stats. Identities = 37/269 (13%), Positives = 80/269 (29%), Gaps = 33/269 (12%) Query: 19 HNLAAWIKENNPDIICLQE-------------TKTEDKNFPF-ETLQSLNYHIET----- 59 + + +K+ NPD + QE K + +FP ++ + N+H Sbjct: 79 NGVIQTMKKQNPDFMFFQEIDTDSTRSFHVNQVKKVEDDFPKMDSTFASNFHSAFLAVPL 138 Query: 60 --CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 +GV +SKY+ + +F++ + N Sbjct: 139 NNPHGTVRSGVLSMSKYKMDSAIRRKYPVSSVPIEKFVDLDRCFVVMRFPVTNGKDLVMI 198 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + YD K ++ S +E E G+Y I+ + Sbjct: 199 NSHMSAYDKGGKMRKAQMKLISSVMEKEYRR---GNYVIVGGDFNHALGKDMMTHFEHQE 255 Query: 178 EVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSWSKNKGIRI-DHIMLSPEATS 234 E+ L + + ++ + K + I D ++S + Sbjct: 256 EIPSWVSVLDQKMLSKDFTMIKAQNRENVATVRATDMKYDPKVNYMTICDGFIVSKNVQA 315 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +++ + DH PV + ++ Sbjct: 316 KVYNINTHFEYA------DHNPVRLEFEL 338 >gi|67078126|ref|YP_245746.1| hypothetical protein pE33L466_0251 [Bacillus cereus E33L] gi|66970432|gb|AAY60408.1| conserved hypothetical protein [Bacillus cereus E33L] Length = 237 Score = 41.7 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 30/261 (11%), Positives = 59/261 (22%), Gaps = 27/261 (10%) Query: 4 VTVATWNVNS--IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + WN R +I + DI+ + E E + + G Sbjct: 1 MKIVAWN-AGMAFRKKIDKILPL----KADILVISEC---------EKPEKWGQIDKEKG 46 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 + I + + + ++ Sbjct: 47 INDFLWEGDNPNKGIGIITFDERYQIEIYPDYDRSFRYIVPIKISAGNQEFIMFAVWSQK 106 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + + +L L+EP I GD+N F Sbjct: 107 GEKRYSSYIGQIYLALEKYASLLKEPCIIVGDWNSCKLYDWIKRVKTHSEVVEFLEGFGI 166 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 + + + + ID + S + L S I Sbjct: 167 KNAYHHFSEEEQG------EESKTTHYLRKEKARPFH----IDCLFTSEIFLNELESIEI 216 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 + W + SDH P+ + Sbjct: 217 GSYE-EWIEFSDHMPISAEFN 236 >gi|323307597|gb|EGA60864.1| Ngl2p [Saccharomyces cerevisiae FostersO] Length = 488 Score = 41.7 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 28/192 (14%), Positives = 49/192 (25%), Gaps = 3/192 (1%) Query: 17 RIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNY--HIETCGQKSYNGVAILSK 73 R L K N D+ICLQE + ++F + L Y K++ + + Sbjct: 115 RSKVLLNEFKYYNSDVICLQEIDHIQFQSFWKDEFSKLGYDGQYYRNATKNHGVAIMWRR 174 Query: 74 YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKR 133 ++ L D + T T N + + + I Sbjct: 175 ELFHQVDKMLIDYDKESSESISARTTTNNVGLVLALKFSEKVLSNLGKKSSKKCGILIGT 234 Query: 134 FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTD 193 F E + + N + END + + F Sbjct: 235 THLFWHPFGTYERTRQCYIVLKKMKEFMHRVNVLQNENDGDLSHWFPFFCGDFNSQPFDT 294 Query: 194 AIRATHDTHHLY 205 + Y Sbjct: 295 PYLSMTSKPVHY 306 >gi|301307706|ref|ZP_07213663.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 20_3] gi|300834380|gb|EFK64993.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 20_3] Length = 305 Score = 41.7 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 37/299 (12%), Positives = 69/299 (23%), Gaps = 56/299 (18%) Query: 4 VTVATWNV-----------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52 + VAT+N+ N R +A I+ + DI QE K + Sbjct: 23 MVVATYNLRNANAGDSTNGNGWGQRYPYIAQLIQFHGFDIFGTQEGKYQ--QLQDLKNAM 80 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL-RIGNL 111 Y G+ S + + + + L RI Sbjct: 81 PGYDYIGVGRDDGKQAGEHSAIFYRKEKFEVLDHGDFWLSTITDRPNKGWDAVLPRICTW 140 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 T + + + E + P N Sbjct: 141 GKFRDKQTGFTFLFFNL-----HMDHIGVQARAESAKLILKKLKEFP-EKLPAILTGDFN 194 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK--GIRIDHIMLS 229 + + + +++ ++ RIDH+ L+ Sbjct: 195 VDQHNESYLLLDNSGIMRDSYQIADFRYVPNGTF-------NAFHADRKTDSRIDHLFLT 247 Query: 230 PEATSLLHSARIDTKPRGWT-------------------------KPSDHTPVIVSLDI 263 E + + T PSDH PV+V +++ Sbjct: 248 KEFD--VKKYGVLTDTYRSEAKESAQKEQDANFPKEVSMQKYVARTPSDHFPVMVVVEV 304 >gi|290892528|ref|ZP_06555521.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes FSL J2-071] gi|290557837|gb|EFD91358.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes FSL J2-071] Length = 256 Score = 41.7 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 35/271 (12%), Positives = 72/271 (26%), Gaps = 26/271 (9%) Query: 3 VVTVATWNVN---------SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + +V T+N+ S R + + + D + ++E + + + Sbjct: 1 MFSVTTFNIRFDDTSERKKSWELRKTLTKSLLDKYQWDFMGVEE-PLLPQMLDMKAMLDW 59 Query: 54 NYH-IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 +Y + + + L T + + + Sbjct: 60 DYFGVGRDDGLEKGEFTAVFYNSTRFTLLQEGHFWLSDTPDVPSIHSTAMFPRICVWGKF 119 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 + FASQ L + +I I+ + N Sbjct: 120 ADSDGKQFYLFNTHLDHISEEARLFASQLLLKKAAIIAENSPVIVLGDFNTQPNTPTYNY 179 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 + Q + G T + H +N+ +ID+I +S E Sbjct: 180 ITEKYQDAQLISQKPAKGPTGSFHDFHPL-------------RPENELEKIDYIFVSNEF 226 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +++ SDH PV +LD Sbjct: 227 --QVNTYETIVDEVDGFSASDHFPVTANLDW 255 >gi|148273865|ref|YP_001223426.1| putative hydrolase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147831795|emb|CAN02765.1| conserved hypothetical protein, putative hydrolase [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 281 Score = 41.7 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 5/49 (10%) Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDH 254 ++ +Y A + RID ++++P+ + I+T G PSDH Sbjct: 229 TWSNYKAPKRTT---RRIDWMLVTPDIE--VERVGINTTRIGGRAPSDH 272 >gi|29293902|gb|AAO63565.1| RNA editing complex protein MP100 [Trypanosoma brucei] Length = 902 Score = 41.7 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 32/289 (11%), Positives = 75/289 (25%), Gaps = 32/289 (11%) Query: 2 SVVTVATWNV-------------------NSIRARIHNLAAWIKENNPDIICLQETKTED 42 + + + TWNV S + R +A I+E + D++ +QE E Sbjct: 616 ASLKLLTWNVMFDRYSGKPTPLGMPGIDWCSPK-RYPVIAKIIEEEDADVVGMQEV--EP 672 Query: 43 KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN 102 + F + ++L + + LP ++ Sbjct: 673 VFWEFLSKRALIRQRYYFSCGHMSPAIAPWGVLMLIHRRRLPVQSINYLNVPAWTNHVSL 732 Query: 103 TQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD 162 + + ++ S + + GD + +D Sbjct: 733 MPVVGLKMVHGTVHIAAAHLLAPYTKSHENARTSQDTALRHHMTKTLGGGDVVTMGDFND 792 Query: 163 CYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR 222 ++ D F+ + +++ R Sbjct: 793 WPTNEFIMPHESQYVDCWPVLHPNNPGKTMDETNTFCKLKVEEMFFGRSDKVFLRSR--R 850 Query: 223 I----DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPR 267 + H++ + ++A + PSDH V ++ + P Sbjct: 851 LVPVEAHLVGTRSVNDENNNA----DAPAYLFPSDHYGVSITFSLKVPE 895 >gi|322387486|ref|ZP_08061096.1| RgfB protein [Streptococcus infantis ATCC 700779] gi|321142015|gb|EFX37510.1| RgfB protein [Streptococcus infantis ATCC 700779] Length = 272 Score = 41.7 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 34/276 (12%), Positives = 84/276 (30%), Gaps = 22/276 (7%) Query: 4 VTVATWNVNSIRARIHN--------LAAWIKENNPDIICLQE-----TKTEDKNFPF--E 48 + T N +S + L I EN+ D+IC QE T T+ ++ P Sbjct: 1 MKFLTLNTHS---WMEKNPEEKFQLLLQDILENSYDLICFQEINQEITSTQVESGPLYNP 57 Query: 49 TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108 + H + + ++ + G D + I + I + + + Sbjct: 58 LPSAEPIHQDHYVRLLVEKLSEKGLDYYWTWAYNHIGYDRYHEGVSILSKTPIKAREILV 117 Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG-DYNIIPQPHDCYNPI 167 ++ P + + K + ++ + + + + + Sbjct: 118 SDVDDPTDYHTRRVALVETVVEGKELAVASVHLSWWDKGFQEEWARFEAVLKELNKPLLL 177 Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227 + + E Q+ + DA + Y+ + +RID++ Sbjct: 178 AGDFNNPAGQEGYQAILSSP-LDLQDAFEVAKERSGSYTVPPEIDGWKGNTEPLRIDYVF 236 Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 ++ + + ++ + + SDH + L Sbjct: 237 MTKDL--QVEKLQVVFDGQASPQVSDHFGLQAELSW 270 >gi|189520528|ref|XP_001338369.2| PREDICTED: sphingomyelin phosphodiesterase 2-like [Danio rerio] Length = 436 Score = 41.7 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 40/281 (14%), Positives = 66/281 (23%), Gaps = 35/281 (12%) Query: 5 TVATWNVNSI----RARIHNLA---AWIKENNPDIICLQETKTEDKNFPFETLQSLNY-H 56 V + N I + R + + D+ LQE E + S Y H Sbjct: 10 RVLSLNCWGIQYLSKKRQERFVLIGELLNQEELDVALLQEVWCEKDFLYLKKKLSTVYPH 69 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-----------TINTQT 105 + + I + I+ Sbjct: 70 SHYFKSGFFGSGLAVFSRHQIHDAFLYRYSLNGYPYMAQHGDWFGGKAVGKVLLNISGLK 129 Query: 106 LRIGNLYLPHGNPITSTKY-DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 + + +L Y ++ +F + +I GD N+ P Sbjct: 130 VHVFVTHLHAEYCREKDSYLSHRVVQAWELQQFIRHTSAGADVVILGGDLNMHPDDLGTR 189 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRID 224 + E TH + + ++ D GIRID Sbjct: 190 LLRNYTGLQDSFTEAATFDGC--------EGGLTHISENPFTLAD---GLAPFGGGIRID 238 Query: 225 HIM--LSPEATSLLHSARIDTKPRGWTKP--SDHTPVIVSL 261 +IM S E S P SDH + Sbjct: 239 YIMFKGSGEVDVSCESLSTTKGPVPGQPFPYSDHEALTAQF 279 >gi|291009864|ref|ZP_06567837.1| endonuclease/exonuclease/phosphatase family protein [Saccharopolyspora erythraea NRRL 2338] Length = 305 Score = 41.7 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 33/258 (12%), Positives = 70/258 (27%), Gaps = 29/258 (11%) Query: 22 AAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81 A+++ + D+ +QET + E L +H G + + + + Sbjct: 51 EAFVRSSGADVFGMQET---EGTLADELAGRLGWHSYQTGDVALLSRYPIVERFQSRVGV 107 Query: 82 HLPGDDLDVQARFIEATFTINTQ------TLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135 D + + T +S + D+ +++ Sbjct: 108 GARLQLDDGRQAVVWTVHLNYTPYGPYDACFDHMTPQQILDREESSGRVDEIRETLEKMA 167 Query: 136 RFASQRLELEEPLIFAGDYN-IIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDA 194 Q P+ GD+N + F +A Sbjct: 168 PQIEQARAGGAPVFLTGDFNAPSHLDWTGAAQDSHCGYTVQWPTSVAVAEAGLADSFREA 227 Query: 195 IRATHDTHHLYSFWDYYADSWSKNKGI--------RIDHIMLSPEATSLLHSARID---- 242 T ++ + + K+ G RID + + A ++ +A + Sbjct: 228 NADPVATPGN-TW----SPVYPKHDGSTGADEPQDRIDFVHHAGSARTVSSTAEVRGEPA 282 Query: 243 --TKPRGWTKPSDHTPVI 258 G P+DH V+ Sbjct: 283 PVPDHAGNEWPTDHAAVV 300 >gi|188577518|ref|YP_001914447.1| exodeoxyribonuclease III [Xanthomonas oryzae pv. oryzae PXO99A] gi|188521970|gb|ACD59915.1| exodeoxyribonuclease III [Xanthomonas oryzae pv. oryzae PXO99A] Length = 52 Score = 41.7 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 10/26 (38%), Positives = 22/26 (84%) Query: 205 YSFWDYYADSWSKNKGIRIDHIMLSP 230 Y+FW+Y+ +++++G+RIDH++L+ Sbjct: 27 YTFWEYFRQHFARDRGLRIDHLLLNR 52 >gi|42528087|ref|NP_973185.1| endonuclease/exonuclease/phosphatase family protein [Treponema denticola ATCC 35405] gi|41819132|gb|AAS13104.1| endonuclease/exonuclease/phosphatase family protein [Treponema denticola ATCC 35405] Length = 339 Score = 41.7 bits (96), Expect = 0.13, Method: Composition-based stats. Identities = 31/262 (11%), Positives = 65/262 (24%), Gaps = 54/262 (20%) Query: 30 PDIICLQET--KTEDKNFPFETLQSLNYHIETCGQKSYNGVAI--------LSKYQPIEI 79 PDI+ LQE + +F + +Y G +++ + + Sbjct: 101 PDILVLQEIESRAVIDDFCKILPMNNSYKYAVFIPPQNGGAFSTALLSKFPITETKVFNV 160 Query: 80 VTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFAS 139 + ++ R T + + + + + + + Sbjct: 161 YSGKRSLRPLIETRIRIGNSTGDNELVLLNVHWKSKVGNSDTDSIRRQQEEQAYKRLKEL 220 Query: 140 QRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH 199 + E + P I GD+N + + + Q + F Sbjct: 221 KASEPQTPFIICGDFNQTLEEFSLLSEFDNCWNIEAYRAAAQEGSQPAGSYFYKE----- 275 Query: 200 DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS------ARID----------- 242 S+ +G IDH S + + I+ Sbjct: 276 ------SW-----------EG--IDHFFYSDNLSDG-KNFDLSFFCVINLKPLTDTSGKP 315 Query: 243 --TKPRGWTKPSDHTPVIVSLD 262 SDH P+ + L Sbjct: 316 DKYSVYSGKGYSDHLPIGIILK 337 >gi|291240061|ref|XP_002739940.1| PREDICTED: angel-like [Saccoglossus kowalevskii] Length = 378 Score = 41.3 bits (95), Expect = 0.13, Method: Composition-based stats. Identities = 23/164 (14%), Positives = 41/164 (25%), Gaps = 5/164 (3%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73 R +NL IKE DI+CLQE ++++F L L Y + + Sbjct: 31 RKNNLMKEIKELQADILCLQEV--QEEHFQTFYQPQLALLGYEGVFKRRTGDKHDGCATF 88 Query: 74 YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKR 133 + + + + + + + KR Sbjct: 89 FLTSQFELETYRLIQYYKPGVYLLNRDNVGVIVLLKPKVNTSSHQRICVANTHLLFNPKR 148 Query: 134 FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 +Q L + Y P + D Sbjct: 149 GDVKLAQLAVLFAEIDKLALRRTTHNGRPVYCPTLLCGDMNSIP 192 >gi|186684269|ref|YP_001867465.1| endonuclease I [Nostoc punctiforme PCC 73102] gi|186466721|gb|ACC82522.1| Endonuclease I [Nostoc punctiforme PCC 73102] Length = 603 Score = 41.3 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 2/52 (3%) Query: 223 IDHIMLSPEATSLLH-SARIDTKPRGWTKP-SDHTPVIVSLDIPEPRKKQQD 272 IDH+++S + + I G+++P SDH PVI + +P + Sbjct: 304 IDHLLVSENLSRVAQPKIDIVHVNVGFSRPVSDHDPVIAAFTLPANQSTSDT 355 >gi|255514310|gb|EET90569.1| Endonuclease/exonuclease/phosphatase [Candidatus Micrarchaeum acidiphilum ARMAN-2] Length = 234 Score = 41.3 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 33/262 (12%), Positives = 65/262 (24%), Gaps = 33/262 (12%) Query: 3 VVTVATWNV---NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 ++ + N+ N AR+ + +IKE PDI+ LQE + Sbjct: 1 MLKLLDLNIWLYNDWEARMPKIVNFIKEQKPDIVTLQEV------MDDAKYNKYGDNTA- 53 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 G+ + Y + P D +AR EA + T + H + Sbjct: 54 KQIARAAGMDNCAFYLSGNLQKESPQWIGDRRARAGEAILSKYPLTKIVKKKLKRHPDDR 113 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + + + ++ + D + Sbjct: 114 HHRGIVKARVMSEPPIDIIVVHFSNNDLFSRLQMEEVLHYIRRARIRPVVVGDFNMYPKN 173 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + + +F D++M+ Sbjct: 174 IMQMVPEDYILSYALKKYVSFPSEGNTF----------------DYMMIPRSMRFGSLEC 217 Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261 ID SDH+ +I + Sbjct: 218 -IDR------GLSDHSALIAEI 232 >gi|6323941|ref|NP_014012.1| Ngl2p [Saccharomyces cerevisiae S288c] gi|2497217|sp|Q03264|NGL2_YEAST RecName: Full=RNA exonuclease NGL2; AltName: Full=Carbon catabolite repressor protein 4 homolog gi|825551|emb|CAA89783.1| unknown [Saccharomyces cerevisiae] gi|190408511|gb|EDV11776.1| RNase [Saccharomyces cerevisiae RM11-1a] gi|256270686|gb|EEU05849.1| Ngl2p [Saccharomyces cerevisiae JAY291] gi|259148873|emb|CAY82118.1| Ngl2p [Saccharomyces cerevisiae EC1118] gi|285814291|tpg|DAA10186.1| TPA: Ngl2p [Saccharomyces cerevisiae S288c] gi|323346978|gb|EGA81255.1| Ngl2p [Saccharomyces cerevisiae Lalvin QA23] gi|323353212|gb|EGA85512.1| Ngl2p [Saccharomyces cerevisiae VL3] Length = 515 Score = 41.3 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 28/192 (14%), Positives = 49/192 (25%), Gaps = 3/192 (1%) Query: 17 RIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNY--HIETCGQKSYNGVAILSK 73 R L K N D+ICLQE + ++F + L Y K++ + + Sbjct: 142 RSKVLLNEFKYYNSDVICLQEIDHIQFQSFWKDEFSKLGYDGQYYRNATKNHGVAIMWRR 201 Query: 74 YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKR 133 ++ L D + T T N + + + I Sbjct: 202 ELFHQVDKMLIDYDKESSESISTRTTTNNVGLVLALKFSEKVLSNLGKKSSKKCGILIGT 261 Query: 134 FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTD 193 F E + + N + END + + F Sbjct: 262 THLFWHPFGTYERTRQCYIVLKKMKEFMHRVNVLQNENDGDLSHWFPFFCGDFNSQPFDT 321 Query: 194 AIRATHDTHHLY 205 + Y Sbjct: 322 PYLSMTSKPVHY 333 >gi|89095707|ref|ZP_01168601.1| Endonuclease/Exonuclease/phosphatase family protein [Bacillus sp. NRRL B-14911] gi|89089453|gb|EAR68560.1| Endonuclease/Exonuclease/phosphatase family protein [Bacillus sp. NRRL B-14911] Length = 1532 Score = 41.3 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 26/63 (41%), Gaps = 10/63 (15%) Query: 200 DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS--LLHSARIDTKPRGWT-KPSDHTP 256 YS+ Y ++ +DHI++S + + I++ + SDH P Sbjct: 1025 PAEERYSY-SYQGNAQV------LDHILVSNNLAAATAVDIVHINSGFMEEHGRASDHDP 1077 Query: 257 VIV 259 V++ Sbjct: 1078 VLI 1080 >gi|328725105|ref|XP_003248346.1| PREDICTED: craniofacial development protein 2-like, partial [Acyrthosiphon pisum] Length = 280 Score = 41.3 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 35/259 (13%), Positives = 79/259 (30%), Gaps = 19/259 (7%) Query: 3 VVTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTE-DKNFPFETLQSLNYHIET 59 V TWN+ S+ + + + +K+ D++ LQE + + + + ++ + Sbjct: 25 VFRFGTWNIRSLYKPGALKCITSIVKKYYVDLVALQEVRWPGSGHLKSDNMTI--FYSGS 82 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 + +GV + K +++V D + IE + + N Sbjct: 83 GNGRHEHGVGFIVKEFLVKLVKKFEAVDDRLCYIIIEGKTSNIA-IINCYAPTETADNDY 141 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + YD R + L ++ ++ N+ + Sbjct: 142 KDSFYDKLERVYDMIPRSYIRILVGDQNAQVGREHAFRHTIGKESMHSESNNNGLRLISF 201 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + + + ++ + S+ IDHI++ S + Sbjct: 202 ASTKGLVISSTQFQRKEIYKQ-----TWVSPDGRTKSQ-----IDHILIDKRYRSSVRQV 251 Query: 240 RIDTKPRGWTKPSDHTPVI 258 RG +DH VI Sbjct: 252 ---RSYRGADGDTDHYLVI 267 >gi|284033875|ref|YP_003383806.1| endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836] gi|283813168|gb|ADB35007.1| Endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836] Length = 320 Score = 41.3 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 16/41 (39%), Positives = 21/41 (51%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 ID I LSP L +A I + + +DH P +SLDI Sbjct: 280 IDQIWLSPALAPKLTAAWIGRRRKLARDGTDHDPAWISLDI 320 >gi|91785939|ref|YP_546891.1| endonuclease/exonuclease/phosphatase [Polaromonas sp. JS666] gi|91695164|gb|ABE41993.1| Endonuclease/exonuclease/phosphatase [Polaromonas sp. JS666] Length = 267 Score = 41.3 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 31/270 (11%), Positives = 69/270 (25%), Gaps = 33/270 (12%) Query: 3 VVTVATWNVN-SI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN-- 54 + V T N++ + + L ++ D++ LQE T + + + Sbjct: 22 LFKVLTVNIHKGFTFFNRKFILPELREAVRTVGADVVFLQEV-TGNHLKHADKFDNYPDT 80 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR-IGNLYL 113 H E + A RF +I+ R + + L Sbjct: 81 PHYEFLADTIWPQFAYGRNAVYTNGHHGNAVLSKFPIVRFENRDVSISGPERRGLLHCEL 140 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + + R + + + + D + + + Sbjct: 141 KVPGRSVNVHAVCVHLGLMETHRVQQMEMLCDLVRKDIPPHAPVVVAGDFNDWRLRAHTL 200 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 + N A +R+D I + Sbjct: 201 LESGADLHEVFVQANGQAARTFPARLPL-------------------LRLDRIYV----R 237 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + + A + R W+ SDH P+ +++ Sbjct: 238 NAIGHAPVVLPSRPWSHLSDHAPLAAEIEL 267 >gi|270003873|gb|EFA00321.1| hypothetical protein TcasGA2_TC003159 [Tribolium castaneum] Length = 398 Score = 41.3 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 44/269 (16%), Positives = 71/269 (26%), Gaps = 27/269 (10%) Query: 9 WNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGV 68 WN +R + I E PDIICLQE + NF L + Y + V Sbjct: 137 WN-----SRKFRIIEEIVEYCPDIICLQEV--DHFNFLKYILGTQGYTGVFYPKPDSPCV 189 Query: 69 AILSKYQPIEIVTHLPGDDL---DVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYD 125 I P + ++++R +E + Q + NL + Sbjct: 190 YISGNNGPDGCAIFYRTNKFDVINIESRILEIWRVQSNQVALLANLRIKETGQEVCVTTT 249 Query: 126 DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ-PHDCYNPIIWENDACFTLEVRQSFQ 184 + FL + + P +N E L Sbjct: 250 HLKARQGAFLSTLRNEQGKDLLQFVSQHCGPRPVVICGDFNAEPIEPIYSTILSDEYLNL 309 Query: 185 KLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK 244 + + Y+ W + + ID+I A + Sbjct: 310 GSAYADCDSSSANSAAREPPYTTWKIRDEGEVCHT---IDYIFYKKGCLE--VEA-VLEL 363 Query: 245 PRGWT----------KPSDHTPVIVSLDI 263 P G PSDH ++ I Sbjct: 364 PTGEEIGEDRVPSFSYPSDHFSLVCDFKI 392 >gi|50119211|ref|YP_048378.1| endonuclease/exonuclease/phosphatase family protein [Pectobacterium atrosepticum SCRI1043] gi|49609737|emb|CAG73171.1| endonuclease/Exonuclease/phosphatase family protein [Pectobacterium atrosepticum SCRI1043] Length = 392 Score = 41.3 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 28/90 (31%), Gaps = 31/90 (34%) Query: 200 DTHHLYSFWDYYADSWSKNKGIRI---DHIMLSPEATSLLHSARIDT------------- 243 Y++ Y++ KG R+ D+I LS + ++ Sbjct: 307 PEKERYTY--YFSGGK---KGARLNQLDYIFLSAPLHQAVVEWGVERRGIYNIDKIAAKE 361 Query: 244 ---------KPRGWTKP-SDHTPVIVSLDI 263 + W SDH + V +DI Sbjct: 362 GAEPVTPLPEVTSWDTAASDHAALWVEVDI 391 >gi|85712710|ref|ZP_01043755.1| Uncharacterized conserved secreted protein [Idiomarina baltica OS145] gi|85693442|gb|EAQ31395.1| Uncharacterized conserved secreted protein [Idiomarina baltica OS145] Length = 397 Score = 41.3 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 27/65 (41%), Gaps = 15/65 (23%) Query: 210 YYADSWSKNKGIRIDHIMLSPEATSLLHSARID--------TKPRGWTKPS-DHTPVIVS 260 Y+ +W K R+D+++ S + + A I + S DH V + Sbjct: 339 YHTAAWRK----RVDYVLPSDDLI--VKDAGIFWPVQGEPGYELMKKRDASSDHRLVWLD 392 Query: 261 LDIPE 265 +++PE Sbjct: 393 IELPE 397 >gi|298204333|gb|ADI61815.1| endonuclease-reverse transcriptase [Bombyx mori] Length = 1010 Score = 41.3 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 34/255 (13%), Positives = 67/255 (26%), Gaps = 16/255 (6%) Query: 2 SVVTVATWNVNSI--RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 + + + TWNV + ++H L ++ N I L ET ++ ++L H Sbjct: 59 NDIRIGTWNVRGLIDEGKLHVLDHELERCNTVITGLSETHWKESG-----HRNLENHTIY 113 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 + A + P + G + I Sbjct: 114 FSGNELSSFAGVGIAIPKLWTESVLGYNPVSDRIITMKLSASPCALNIIQVYAPTSAATE 173 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + + L + ++ E Sbjct: 174 EKIESFYNQLEACINNIPKREILMIIGDFNAKVGTTVLDVGLRNIVGHYGLGCRNSRGER 233 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 F N+ + H LY++ + +N+ ID+I++ S + +A Sbjct: 234 LIQFAADNNLTIMNTAFKHHPR-RLYTWTS--PNGEHRNQ---IDYILIKTRWRSSITNA 287 Query: 240 RIDTKPRGWTKPSDH 254 G SDH Sbjct: 288 HTLP---GADVTSDH 299 >gi|183599926|ref|ZP_02961419.1| hypothetical protein PROSTU_03446 [Providencia stuartii ATCC 25827] gi|188022200|gb|EDU60240.1| hypothetical protein PROSTU_03446 [Providencia stuartii ATCC 25827] Length = 301 Score = 41.3 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 31/265 (11%), Positives = 63/265 (23%), Gaps = 33/265 (12%) Query: 28 NNPDIICLQET-KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGD 86 + DI+ LQE T F ++SL + T YN + Sbjct: 41 YDVDIVILQEVFNTHSAQKLFSGMRSLGFFYHTPVAAQYNESVLSYCDSNHCWNAKKGEW 100 Query: 87 DLDVQARFIEATFTINTQTLRIGNLYLPHG----------------NPITSTKYDDKISW 130 D+ Q A + R L+ G Sbjct: 101 DMVQQVNSGIAIVSRYPIVYREYQLFDDAGCGADRFSAKGGVRAVIEIEGKMLQVIGTHL 160 Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG 190 N I + +++ ++ Sbjct: 161 QSDDNFCLMTSPSSHRKAQLTQLINWAETSITEDRQITILGGDLNINYGSEEYEQALDII 220 Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKN------KGIRIDHIML----SPEATSLLHSAR 240 + WD+ ++ + + +D+I S + + + ++ Sbjct: 221 GWGEPHHFNPRPS----WDFSTNNVIREAYPDTRQSWHLDYIFAKNMRSIKQQTRVIKSK 276 Query: 241 IDTKPRGWTKP--SDHTPVIVSLDI 263 I SDH PV+ +++ Sbjct: 277 IGYNYNNKVFFDYSDHYPVVAEIEL 301 >gi|118588886|ref|ZP_01546293.1| Endonuclease/exonuclease/phosphatase [Stappia aggregata IAM 12614] gi|118438215|gb|EAV44849.1| Endonuclease/exonuclease/phosphatase [Stappia aggregata IAM 12614] Length = 238 Score = 41.3 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 5/40 (12%) Query: 3 VVTVATWNVN-SI----RARIHNLAAWIKENNPDIICLQE 37 ++ + ++N+ SI R R I+E + DI+ LQE Sbjct: 1 MLKIGSYNIQKSIGVDARRRPDRTLKVIQELDCDILALQE 40 >gi|329769127|ref|ZP_08260548.1| hypothetical protein HMPREF0433_00312 [Gemella sanguinis M325] gi|328839473|gb|EGF89050.1| hypothetical protein HMPREF0433_00312 [Gemella sanguinis M325] Length = 264 Score = 41.3 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 38/285 (13%), Positives = 70/285 (24%), Gaps = 51/285 (17%) Query: 4 VTVATWNVNSIRARIHN--------LAAWIKENNPDIICLQET----------------- 38 + + T NV+S + N LA I E D+I +QE Sbjct: 1 MKLLTINVHS---WLENNQLEKLDILAKTIVEKKYDVIAMQEVNQLINSENVYSNIKKDN 57 Query: 39 --KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIE 96 K +Y+ L+ ++ Q Sbjct: 58 FGKMLLDKINSYGESDYSYYWTYSHIGFDKYEEGLAILAKGKVCDVEDFYCTSHQDIHSI 117 Query: 97 ATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI 156 ++ I TL I T + R L + D N+ Sbjct: 118 SSRKILKVTLEIN----------NQTIEFYSCHMNLPTCEDENIRENLYNLVNHTDDSNL 167 Query: 157 IPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS 216 D + + F + D + S W+ + Sbjct: 168 KIFMGDFNTDYFNQKKDYNMIIEMGLFDTYEMAQKKDDGVTVYKNI---SGWEDSMNKKK 224 Query: 217 KNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +D+I + E + + + + SDH + V++ Sbjct: 225 ------LDYIFSNREL--NVTESSVIFNNTNYPIISDHNGLEVTI 261 >gi|315499225|ref|YP_004088029.1| endonuclease/exonuclease/phosphatase [Asticcacaulis excentricus CB 48] gi|315417237|gb|ADU13878.1| Endonuclease/exonuclease/phosphatase [Asticcacaulis excentricus CB 48] Length = 303 Score = 41.3 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 19/53 (35%), Gaps = 7/53 (13%) Query: 211 YADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 A + G IDHIM S L R G SDH P+I I Sbjct: 258 MAVRRQLDVGSPIDHIMASHTV--HLRHCR-----TGPVMASDHRPLICEFSI 303 >gi|220912809|ref|YP_002488118.1| endonuclease/exonuclease/phosphatase [Arthrobacter chlorophenolicus A6] gi|219859687|gb|ACL40029.1| Endonuclease/exonuclease/phosphatase [Arthrobacter chlorophenolicus A6] Length = 225 Score = 41.3 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 5/41 (12%) Query: 4 VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTED 42 + V ++N +R A L A + ++ D +CLQE D Sbjct: 1 MRVISYN---LRKHAASGELLALARNHDIDALCLQEVDAAD 38 >gi|190348984|gb|EDK41547.2| hypothetical protein PGUG_05645 [Meyerozyma guilliermondii ATCC 6260] Length = 308 Score = 41.3 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 40/261 (15%), Positives = 82/261 (31%), Gaps = 28/261 (10%) Query: 14 IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVA---- 69 + +RIH+ P ++ LQE K N + L LN +T ++ GV Sbjct: 66 LNSRIHDF--------PTLVGLQELK---HNQLVDVLAGLNGQNQTEFPWAHYGVGRDDG 114 Query: 70 ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKIS 129 + + L D L+ +++ T + + G+ + + + K++ Sbjct: 115 VEKGEYSAILYNTLEWDLLNGTYKWLSPTPDVPSYGWDAGSRRIVTMTTFRNKQTGTKVN 174 Query: 130 WIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNM 189 + L S++ E + G IP + + + + A + Sbjct: 175 YFNTHLDNKSEQSRQESTKLIVGWLQSIPNDYPQFLSGDFNSIASDIAYETVADYMADTN 234 Query: 190 GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML-SPEATSL----LHSARIDTK 244 + + Y+ ++Y + ID I S + + + Sbjct: 235 VIANIHETGN--ETTYTGFEY------GDHQSVIDFIWAPSNSNKPKSGVEVVGYEVLSN 286 Query: 245 PRGWTKPSDHTPVIVSLDIPE 265 + SDH PV I Sbjct: 287 NYSDFRFSDHRPVTSHFRISS 307 >gi|328724970|ref|XP_003248303.1| PREDICTED: craniofacial development protein 2-like [Acyrthosiphon pisum] Length = 263 Score = 41.3 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 31/252 (12%), Positives = 65/252 (25%), Gaps = 25/252 (9%) Query: 8 TWNVNSIRA-----RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 TWNV R +HN+ +++ + LQE + + T+ I G Sbjct: 32 TWNV---RTLYKSGAVHNIVNEVEKYKVKLTALQEIRWTNTG----TININETTIFYGGC 84 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 + + D++ + + + + Sbjct: 85 TEQRQLGTGFAVHKDLVPVVKEFKDINSRMSVLTIEAQWFISFVNVHAPTEDKSQDEKEA 144 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 Y+ S + Q + + + ++ + Sbjct: 145 FYEQLESALNLIPSNRIQIVLGDLNAKVGKEEMFRQVTGGHSLHDETNDNGTKLINFAIW 204 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 N + H H ++ D N+ IDHI+++ + + Sbjct: 205 -----NGLVIRSTMFPHKNIHKGTWRS--PDGRYTNQ---IDHILVNSRFKNYIQDV--- 251 Query: 243 TKPRGWTKPSDH 254 RG SDH Sbjct: 252 RSVRGADSDSDH 263 >gi|238883835|gb|EEQ47473.1| conserved hypothetical protein [Candida albicans WO-1] Length = 891 Score = 41.3 bits (95), Expect = 0.14, Method: Composition-based stats. Identities = 47/293 (16%), Positives = 84/293 (28%), Gaps = 46/293 (15%) Query: 8 TWNVNSIRARIHN-LAAWI--KENNPD--IICLQET---------------KTEDKNFPF 47 T+NVN + + WI +EN+ D I LQE KT+ + Sbjct: 594 TFNVNG--SVYEGDIDKWIYPEENDYDLIFIGLQEIVVLNAGQMVNTDFRNKTQWERKIL 651 Query: 48 ETLQSLNYHIETC----------GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA 97 LQ N ++ + V +S + T L G + + Sbjct: 652 SVLQKRNKYMVMWSGQLGGVALYFFVKESQVKYVSNVECSFKKTGLGGVSANKGGIAVSF 711 Query: 98 TFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII 157 F+ T + + I + K + + I+ GD+N Sbjct: 712 KFSDTTICF-VSAHLAAGLSNIEERHQNYKALIKGIQFSKNRRIQNHDAV-IWLGDFNYR 769 Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF-WDYYADSWS 216 + + + K G + + + + ++ +D + Sbjct: 770 IDMTNDQVKPMILQKLYAKIFECDQLNKQMANGESFPFFSEQEINFPPTYKFDKGTKVYD 829 Query: 217 KNKGIRI----DHIM-LS-PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 ++ RI D I+ LS L SDH PV + I Sbjct: 830 TSEKQRIPAWTDRILFLSRQNLIEPLS-----YNSCQNLTFSDHRPVYATFKI 877 >gi|254411438|ref|ZP_05025215.1| endonuclease/exonuclease/phosphatase family [Microcoleus chthonoplastes PCC 7420] gi|196181939|gb|EDX76926.1| endonuclease/exonuclease/phosphatase family [Microcoleus chthonoplastes PCC 7420] Length = 261 Score = 41.3 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 41/275 (14%), Positives = 79/275 (28%), Gaps = 31/275 (11%) Query: 1 MSVVTVATWNV--------N-SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51 M++ + T+N+ N R R +AA I+E +PDII QE K + Sbjct: 1 MNI-RIITFNIRYDKPDPDNQDWRIRRDAIAALIQEYHPDIIGTQEGKAH--QLLDLHRR 57 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIE-----ATFTINTQTL 106 NY + + + + + L D + + + Sbjct: 58 LPNYQSIGGDRTGTGTGEHCAIFYNQDRLKCLDNGDFYLSDTPDIAGSISPEWGNPAPRM 117 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 ++ T T ++ + + R RL + + + Sbjct: 118 ATWAVFSVAQVSKTITCFNTHLDYTSAKARELGARLIRDRMIHC-------HPDNTYLFL 170 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226 N +L N A + S + ++++ +D I Sbjct: 171 TGDFNAEPGSLPREILSDSSTNSMILHDALAGVELEKQQSIHGFTGEAFAA-----VDTI 225 Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + +D + PSDH PVI + Sbjct: 226 YYDSRLRQ--ETVTVDNRKWQGIFPSDHFPVIANF 258 >gi|83643892|ref|YP_432327.1| metal-dependent hydrolase [Hahella chejuensis KCTC 2396] gi|83631935|gb|ABC27902.1| Metal-dependent hydrolase [Hahella chejuensis KCTC 2396] Length = 265 Score = 41.3 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 32/247 (12%), Positives = 63/247 (25%), Gaps = 42/247 (17%) Query: 18 IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPI 77 + +AA + + D++ LQE + Q Sbjct: 50 LDRIAALL--SQYDVVALQEC-------------------------DGGSIRSGFVNQVE 82 Query: 78 EIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF 137 + Q ++ L + + I + Sbjct: 83 YLAEKSGHPYWFQQLNRNLGRIAQHSNGLLSRYRPNSVTQHKLPGVIPGRGAIIATYGDP 142 Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA 197 + + + L H C +E+ + Q L + Sbjct: 143 TNPLVVVMLHLSLGEKAQCQQLEHVCKLIEGYEHVVLMGDLNNHAEQLLSSTALGRTTLV 202 Query: 198 THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257 + +F + + +DHIM+SP + +A + P SDH PV Sbjct: 203 SLPERVN-TFPSWRPERS-------LDHIMVSPGL--QIRNAGVVCFP-----VSDHLPV 247 Query: 258 IVSLDIP 264 V + +P Sbjct: 248 AVDVALP 254 >gi|89070957|ref|ZP_01158183.1| possible Endonuclease/Exonuclease/phosphatase fa [Oceanicola granulosus HTCC2516] gi|89043464|gb|EAR49678.1| possible Endonuclease/Exonuclease/phosphatase fa [Oceanicola granulosus HTCC2516] Length = 333 Score = 41.3 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 12/52 (23%) Query: 223 IDHIMLSPEATSLLHSARI-----------DTKPR-GWTKPSDHTPVIVSLD 262 +D++M+SP+ + + RI D R SDH PV + LD Sbjct: 281 LDYVMVSPDLAARYPAWRIWHPFEDPALFADPDLRHALLTASDHFPVSLDLD 332 >gi|160891380|ref|ZP_02072383.1| hypothetical protein BACUNI_03830 [Bacteroides uniformis ATCC 8492] gi|156858787|gb|EDO52218.1| hypothetical protein BACUNI_03830 [Bacteroides uniformis ATCC 8492] Length = 217 Score = 41.3 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 8/39 (20%), Positives = 19/39 (48%), Gaps = 2/39 (5%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +D++ ++ + + R+ + SDH P++V L Sbjct: 178 LDYVFVTKG--AKIDRYRVIQDKPENSYLSDHCPILVEL 214 >gi|157160265|ref|YP_001457583.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli HS] gi|170020854|ref|YP_001725808.1| endonuclease/exonuclease/phosphatase [Escherichia coli ATCC 8739] gi|188495117|ref|ZP_03002387.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli 53638] gi|194438459|ref|ZP_03070549.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli 101-1] gi|253774207|ref|YP_003037038.1| endonuclease/exonuclease/phosphatase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254160867|ref|YP_003043975.1| putative DNase [Escherichia coli B str. REL606] gi|300929408|ref|ZP_07144877.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 187-1] gi|312970864|ref|ZP_07785043.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia coli 1827-70] gi|157065945|gb|ABV05200.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli HS] gi|169755782|gb|ACA78481.1| Endonuclease/exonuclease/phosphatase [Escherichia coli ATCC 8739] gi|188490316|gb|EDU65419.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli 53638] gi|194422683|gb|EDX38680.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli 101-1] gi|242376582|emb|CAQ31291.1| predicted DNase [Escherichia coli BL21(DE3)] gi|253325251|gb|ACT29853.1| Endonuclease/exonuclease/phosphatase [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253972768|gb|ACT38439.1| predicted DNase [Escherichia coli B str. REL606] gi|253976988|gb|ACT42658.1| predicted DNase [Escherichia coli BL21(DE3)] gi|300462608|gb|EFK26101.1| endonuclease/exonuclease/phosphatase family protein [Escherichia coli MS 187-1] gi|310336625|gb|EFQ01792.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia coli 1827-70] gi|323963037|gb|EGB58608.1| endonuclease/Exonuclease/phosphatase [Escherichia coli H489] Length = 253 Score = 41.3 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 33/267 (12%), Positives = 65/267 (24%), Gaps = 32/267 (11%) Query: 5 TVATWNVN-SI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN--YH 56 V T N++ R + L ++ + DI+CLQE +++ H Sbjct: 11 KVLTINIHKGFTAFNRRFILPELRDAVRTVSADIVCLQEV-MGAHEVHPLHVENWPDTSH 69 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 E ++ A E + +++ R Sbjct: 70 YEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVP 129 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + + R +Q L E + D + D + N Sbjct: 130 PMTGKAIHVMCVHLGLREAHRQAQLAMLAEWVNELPDGEPVLVAGDFNDWRQKANHPLKV 189 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 + +R+D I + + S Sbjct: 190 QAGLDEIFTRAHGRPARTFPVQFPL-------------------LRLDRIYVKNASASAP 230 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263 + + T W SDH P+ + + Sbjct: 231 TALPLQT----WRHLSDHAPLSAEIHL 253 >gi|294900680|ref|XP_002777063.1| carbon catabolite repressor protein, putative [Perkinsus marinus ATCC 50983] gi|239884517|gb|EER08879.1| carbon catabolite repressor protein, putative [Perkinsus marinus ATCC 50983] Length = 320 Score = 41.3 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 43/289 (14%), Positives = 85/289 (29%), Gaps = 55/289 (19%) Query: 9 WNVNSIRARIHNLAAWIKENNPDIICLQETKTED--KNFPFETLQSLNYHIETCGQKSYN 66 WN+ R+ L +++ DI+CL E D ++F + + + Sbjct: 56 WNM-----RLPMLVKTCLDSSADILCLCE---MDSYEDFRQALGSYYDGYFAPRAGGRDD 107 Query: 67 GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDD 126 G AI + +++++ R N + + Sbjct: 108 GSAIFWRRSILKLMSAKTLHYTGGSERVAAICRLQNLYGQTFTVVGTHLYWKGSCPTQSH 167 Query: 127 KISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL 186 + + L+ +EP+I GD N + D + I + Sbjct: 168 E---VDELTTELRAILDRDEPVILCGDLN-NHRDSDTFMRIRDCGMEDGFTAAGLKPPRY 223 Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR--IDHIML---SPEATSLLHSAR- 240 ++ + + S+ G ID+I + S + T + A Sbjct: 224 TSLVPPSYVL------------SSRSGSYRLLPGREDEIDYIFVGGQSSDLTLKVVDAVA 271 Query: 241 IDT--------------------KPRG---WTKPSDHTPVIVSLDIPEP 266 ID+ RG + SDH PV+ +++ P Sbjct: 272 IDSRNDETGNGVVTGADSRDSSVAERGIPNMSHASDHLPVMCEVELTGP 320 >gi|207342066|gb|EDZ69945.1| YMR285Cp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 510 Score = 41.3 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 28/192 (14%), Positives = 49/192 (25%), Gaps = 3/192 (1%) Query: 17 RIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNY--HIETCGQKSYNGVAILSK 73 R L K N D+ICLQE + ++F + L Y K++ + + Sbjct: 142 RSKVLLNEFKYYNSDVICLQEIDHIQFQSFWKDEFSKLGYDGQYYRNATKNHGVAIMWRR 201 Query: 74 YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKR 133 ++ L D + T T N + + + I Sbjct: 202 ELFHQVDKMLIDYDKESSESISTRTTTNNVGLVLALKFSEKVLSNLGKKSSKKCGILIGT 261 Query: 134 FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTD 193 F E + + N + END + + F Sbjct: 262 THLFWHPFGTYERTRQCYIVLKKMKEFMHRVNVLQNENDGDLSHWFPFFCGDFNSQPFDT 321 Query: 194 AIRATHDTHHLY 205 + Y Sbjct: 322 PYLSMTSKPVHY 333 >gi|318079532|ref|ZP_07986864.1| hypothetical protein SSA3_23297 [Streptomyces sp. SA3_actF] Length = 72 Score = 41.3 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 19/48 (39%), Gaps = 9/48 (18%) Query: 222 RIDHIMLSPEATSLLHSARI----DTKPRGWTKPSDHTPVIVSLDIPE 265 RID + +S + + D R SDH PV+ L +P Sbjct: 28 RIDAMFVSEGVE--VLGCGVPTLEDADVRA---ASDHVPVLAVLRLPA 70 >gi|116511761|ref|YP_808977.1| metal-dependent hydrolase [Lactococcus lactis subsp. cremoris SK11] gi|116107415|gb|ABJ72555.1| Metal-dependent hydrolase [Lactococcus lactis subsp. cremoris SK11] Length = 352 Score = 41.3 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 34/269 (12%), Positives = 71/269 (26%), Gaps = 30/269 (11%) Query: 14 IRARIHNLAAWIKENNPDIICLQET--------KTEDKNFPFETLQSL------NYHIET 59 +++ I IK+ NPD +QE + + L NY Sbjct: 93 VKSAIQEDIRLIKKENPDFGNIQEIDWQGDRSQQVNEPQLVRAGLPDYSSVLTQNYDSAY 152 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-TQTLRIGNLYLPHGNP 118 + + + + + L + + + Sbjct: 153 LFYPVTKPIGKAKSGIMTYSKYEIENSTRYKLPIETNFNKFFDLDRAFSVSLLPIKNSDK 212 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + + + F+ + + L A + + A Sbjct: 213 K----FVIFNTHLSAFITDQKIQKQQLVTLFDAMKKYVNKGDYVICGADYNHALAGKAHP 268 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSF----WDYYADSWSKNKGIRIDHIMLSPEATS 234 ++ T +R T+ + + Y+ + GI ID ++S Sbjct: 269 ELTWMKEFPTENLTKGMRVVAPTNAP-TVRSLDFAYHQKNPKNTFGI-IDGFLVSNNIKD 326 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 L ID + K SDH PV++ + Sbjct: 327 -LKIQTIDNQ----FKSSDHQPVLMDFSL 350 >gi|296273651|ref|YP_003656282.1| endonuclease/exonuclease/phosphatase [Arcobacter nitrofigilis DSM 7299] gi|296097825|gb|ADG93775.1| Endonuclease/exonuclease/phosphatase [Arcobacter nitrofigilis DSM 7299] Length = 517 Score = 41.3 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 38/289 (13%), Positives = 78/289 (26%), Gaps = 50/289 (17%) Query: 7 ATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETCGQKS 64 T+N ++ ++ I + + D+I LQE E K E ++L + K+ Sbjct: 55 TTYN-----TKLKHIVKVINDLDKDVIALQEV--ESKQAFDELAKNLPQYKYSIFKKYKT 107 Query: 65 YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124 + + I + V ++ T I+ + N + P S + Sbjct: 108 SSIGLAILSKYEISDYKLIDVKHSKVNRPILKVTLNIDNHKFIVFNNHWPSKRNEESQRV 167 Query: 125 DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ 184 + + L + + GD N + + N T Sbjct: 168 LYAQ-----AIEEYIKNLNEDVDYVILGDLNSNYNEFETFKYSKLNNTYDLTGINDVLNT 222 Query: 185 KLQNMGFTDAIRATHDTHHLYSFW---------DYYADSWSKNKGIRIDHIMLSPEATSL 235 ++ + +D Y+ W Y ++ D+I+L Sbjct: 223 SIKGKFISKNEILKYDKKVHYNLWLELNYNQRFSYKFRGENETP----DNIVLPKALFDN 278 Query: 236 ------------------LHSARIDT-----KPRGWTKPSDHTPVIVSL 261 + +I SDH P+ + Sbjct: 279 KNISYVNNSFQVFKPNYLIKDGKIFRWKIKNNIHQNIGYSDHLPIYATF 327 >gi|256838623|ref|ZP_05544133.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|256739542|gb|EEU52866.1| conserved hypothetical protein [Parabacteroides sp. D13] Length = 304 Score = 41.3 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 36/298 (12%), Positives = 69/298 (23%), Gaps = 55/298 (18%) Query: 4 VTVATWNV-----------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52 + VAT+N+ N R +A I+ + DI QE K + Sbjct: 23 MVVATYNLRNANAGDSTNGNGWGQRYPYIAQLIQFHGFDIFGTQEGKYQ--QLQDLKNAM 80 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL-RIGNL 111 Y G+ S + + + + L RI Sbjct: 81 PGYDYIGVGRDDGKQAGEHSAIFYRKEKFEVLDHGDFWLSTITDRPNKGWDAVLPRICTW 140 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 T + + + E + P N Sbjct: 141 GKFRDKQTGFTFLFFNL-----HMDHIGVQARAESAKLILKKLKEFP-EKLPAILTGDFN 194 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK--GIRIDHIMLS 229 + + + +++ ++ RIDH+ L+ Sbjct: 195 VDQHNESYLLLDNSGIMRDSYQIADFRYVPNGTF-------NAFHADRKTDSRIDHLFLT 247 Query: 230 PEATSLLHSARIDTKPRGWTK------------------------PSDHTPVIVSLDI 263 E + + T PSDH PV++ +++ Sbjct: 248 KEFD--VKKYGVLTDTYRSEAKDAKNEQNANFPKEVSMQKHVARVPSDHFPVMIVVEV 303 >gi|323303482|gb|EGA57276.1| Ngl2p [Saccharomyces cerevisiae FostersB] Length = 515 Score = 41.3 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 28/192 (14%), Positives = 49/192 (25%), Gaps = 3/192 (1%) Query: 17 RIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNY--HIETCGQKSYNGVAILSK 73 R L K N D+ICLQE + ++F + L Y K++ + + Sbjct: 142 RSKVLLNEFKYYNSDVICLQEIDHIQFQSFWKDEFSKLGYDGQYYRNATKNHGVAIMWRR 201 Query: 74 YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKR 133 ++ L D + T T N + + + I Sbjct: 202 ELFHQVDXMLIDYDKESSESISARTTTNNVGLVLALKFSEKVLSNLGKKSSKKCGILIGT 261 Query: 134 FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTD 193 F E + + N + END + + F Sbjct: 262 THLFWHPFGTYERTRQCYIVLKKMKEFMHRVNVLQNENDGDLSHWFPFFCGDFNSQPFDT 321 Query: 194 AIRATHDTHHLY 205 + Y Sbjct: 322 PYLSMTSKPVHY 333 >gi|221107207|ref|XP_002170688.1| PREDICTED: similar to predicted protein [Hydra magnipapillata] Length = 495 Score = 41.3 bits (95), Expect = 0.15, Method: Composition-based stats. Identities = 44/312 (14%), Positives = 89/312 (28%), Gaps = 58/312 (18%) Query: 4 VTVATWNV------NS---------------IRA--RIHNLAAWIKENNPDIICLQETKT 40 + + T+N+ +S ++ R++ L + N DI+CLQE Sbjct: 189 LRIITYNILADVFCDSEYASEVLYPYCPKYALKLSYRMNLLIKELIGFNADILCLQE--C 246 Query: 41 EDKNFP---FETLQSLNYH----------------IETCGQKSYNGVAILSKYQPIEIVT 81 E K F LQ NY + Y +S + + + Sbjct: 247 ELKMFQVYLKPVLQIYNYEGYLNLKTGKMPEGEAIFIRKNKFIYLKDFSISVKEALHLEC 306 Query: 82 HLPGDDLDVQARFIEATFTINTQ-TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQ 140 + + ++ + I +G + + +R Sbjct: 307 NKDILAAIQNNDIFDLLCKKSSIAQIHILAENKTNGRHLCIFNTHLYFKPGAQLIRVLQI 366 Query: 141 RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA--CFTLEVRQSFQKLQNMGFTDAIRAT 198 + L ++ C + + D F E S + L N+ + Sbjct: 367 AVLLNYVEKVLKEHQTKCSLIMCGDYNSKKGDPLLQFLNEKSYSLKLLYNLDYVLQCPFQ 426 Query: 199 HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT-------SLLHSARIDTKPRGWTKP 251 + + + + + + +D+I + T L + P Sbjct: 427 LENVTGFPLFTVFVPQFRET----LDYIFVDESFTLEGFVPIPLAEELEVFCALPSVVSP 482 Query: 252 SDHTPVIVSLDI 263 SDH P+IV L+ Sbjct: 483 SDHIPLIVDLNW 494 >gi|294054975|ref|YP_003548633.1| Endonuclease/exonuclease/phosphatase [Coraliomargarita akajimensis DSM 45221] gi|293614308|gb|ADE54463.1| Endonuclease/exonuclease/phosphatase [Coraliomargarita akajimensis DSM 45221] Length = 299 Score = 41.3 bits (95), Expect = 0.16, Method: Composition-based stats. Identities = 35/251 (13%), Positives = 62/251 (24%), Gaps = 16/251 (6%) Query: 18 IHNLAAWIKENNPDIICLQETKTED--KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75 H L I PD++ +QE + + + L +L + + ++ Sbjct: 56 KHALRQAILSVRPDVLVVQEIGGAEFLEELRLD-LANLGLEYSSAIHMRGSDTV---RHV 111 Query: 76 PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135 + + F + + G S Sbjct: 112 AVLSMVEPQSIVRHADLNFAYMERRQAVSRGLLELSFEGRGGQNFRLFAVHLKSRRTTEK 171 Query: 136 RFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAI 195 L + I D P + D + Q Sbjct: 172 ADPQSVLWRTREAEACRNRIIERHDGDGNLPYLVVGDFNDHPRSSTLRRFYQRGERELGH 231 Query: 196 --RATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS--ARIDTKPRGWTKP 251 A +++ + S+S G + SPE + + A I PR Sbjct: 232 WVPAADSRGQVWTHFYAREYSYSTVDG-----FVASPELLPSIKNGRATIVDDPRTL-SA 285 Query: 252 SDHTPVIVSLD 262 SDH V + LD Sbjct: 286 SDHRMVYLDLD 296 >gi|237510534|ref|ZP_04523249.1| metal-dependent hydrolase [Burkholderia pseudomallei MSHR346] gi|235002739|gb|EEP52163.1| metal-dependent hydrolase [Burkholderia pseudomallei MSHR346] Length = 338 Score = 41.3 bits (95), Expect = 0.16, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 17/46 (36%) Query: 4 VTVATWNVNSIRARIHNLAAW-----------IKENNPDIICLQET 38 + +AT+N++ L AW + E D+I LQE Sbjct: 53 LRIATYNIHG------GLGAWTASAAERIAVVLDELRADVIALQEV 92 >gi|189235069|ref|XP_974729.2| PREDICTED: similar to nocturnin CG31299-PE [Tribolium castaneum] Length = 397 Score = 41.3 bits (95), Expect = 0.16, Method: Composition-based stats. Identities = 44/269 (16%), Positives = 71/269 (26%), Gaps = 27/269 (10%) Query: 9 WNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGV 68 WN +R + I E PDIICLQE + NF L + Y + V Sbjct: 136 WN-----SRKFRIIEEIVEYCPDIICLQEV--DHFNFLKYILGTQGYTGVFYPKPDSPCV 188 Query: 69 AILSKYQPIEIVTHLPGDDL---DVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYD 125 I P + ++++R +E + Q + NL + Sbjct: 189 YISGNNGPDGCAIFYRTNKFDVINIESRILEIWRVQSNQVALLANLRIKETGQEVCVTTT 248 Query: 126 DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ-PHDCYNPIIWENDACFTLEVRQSFQ 184 + FL + + P +N E L Sbjct: 249 HLKARQGAFLSTLRNEQGKDLLQFVSQHCGPRPVVICGDFNAEPIEPIYSTILSDEYLNL 308 Query: 185 KLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK 244 + + Y+ W + + ID+I A + Sbjct: 309 GSAYADCDSSSANSAAREPPYTTWKIRDEGEVCHT---IDYIFYKKGCLE--VEA-VLEL 362 Query: 245 PRGWT----------KPSDHTPVIVSLDI 263 P G PSDH ++ I Sbjct: 363 PTGEEIGEDRVPSFSYPSDHFSLVCDFKI 391 >gi|167915276|ref|ZP_02502367.1| Metal-dependent hydrolase [Burkholderia pseudomallei 112] Length = 287 Score = 41.3 bits (95), Expect = 0.16, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 17/46 (36%) Query: 4 VTVATWNVNSIRARIHNLAAW-----------IKENNPDIICLQET 38 + +AT+N++ L AW + E D+I LQE Sbjct: 2 LRIATYNIHG------GLGAWTASAAERIAVVLDELRADVIALQEV 41 >gi|167906917|ref|ZP_02494122.1| Metal-dependent hydrolase [Burkholderia pseudomallei NCTC 13177] Length = 296 Score = 41.3 bits (95), Expect = 0.16, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 17/46 (36%) Query: 4 VTVATWNVNSIRARIHNLAAW-----------IKENNPDIICLQET 38 + +AT+N++ L AW + E D+I LQE Sbjct: 11 LRIATYNIHG------GLGAWTAGAAERIAVVLDELRADVIALQEV 50 >gi|167830020|ref|ZP_02461491.1| Metal-dependent hydrolase [Burkholderia pseudomallei 9] Length = 290 Score = 41.3 bits (95), Expect = 0.16, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 17/46 (36%) Query: 4 VTVATWNVNSIRARIHNLAAW-----------IKENNPDIICLQET 38 + +AT+N++ L AW + E D+I LQE Sbjct: 5 LRIATYNIHG------GLGAWTASAAERIAVVLDELRADVIALQEV 44 >gi|167723990|ref|ZP_02407226.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei DM98] Length = 296 Score = 41.3 bits (95), Expect = 0.16, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 17/46 (36%) Query: 4 VTVATWNVNSIRARIHNLAAW-----------IKENNPDIICLQET 38 + +AT+N++ L AW + E D+I LQE Sbjct: 11 LRIATYNIHG------GLGAWTASAAERIAVVLDELRADVIALQEV 50 >gi|146305200|ref|YP_001185665.1| endonuclease/exonuclease/phosphatase [Pseudomonas mendocina ymp] gi|145573401|gb|ABP82933.1| Endonuclease/exonuclease/phosphatase [Pseudomonas mendocina ymp] Length = 290 Score = 41.3 bits (95), Expect = 0.16, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 26/66 (39%), Gaps = 14/66 (21%) Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 +F + +DHI+LS E L + ++P SDH PV V + +P Sbjct: 229 TFPSWRPQ-------RCLDHILLSSELE--LGRVDVLSQP-----ISDHLPVAVEIRLPG 274 Query: 266 PRKKQQ 271 + Sbjct: 275 AQNAAP 280 >gi|53722408|ref|YP_111393.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei K96243] gi|52212822|emb|CAH38854.1| putative Endonuclease/Exonuclease/phosphatase family protein [Burkholderia pseudomallei K96243] Length = 338 Score = 41.3 bits (95), Expect = 0.16, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 17/46 (36%) Query: 4 VTVATWNVNSIRARIHNLAAW-----------IKENNPDIICLQET 38 + +AT+N++ L AW + E D+I LQE Sbjct: 53 LRIATYNIHG------GLGAWTASAAERIAVVLDELRADVIALQEV 92 >gi|254186690|ref|ZP_04893206.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei Pasteur 52237] gi|157934374|gb|EDO90044.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei Pasteur 52237] Length = 338 Score = 41.3 bits (95), Expect = 0.16, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 17/46 (36%) Query: 4 VTVATWNVNSIRARIHNLAAW-----------IKENNPDIICLQET 38 + +AT+N++ L AW + E D+I LQE Sbjct: 53 LRIATYNIHG------GLGAWTASAAERIAVVLDELRADVIALQEV 92 >gi|126444014|ref|YP_001062967.1| metal-dependent hydrolase [Burkholderia pseudomallei 668] gi|126223505|gb|ABN87010.1| metal-dependent hydrolase [Burkholderia pseudomallei 668] Length = 338 Score = 41.3 bits (95), Expect = 0.16, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 17/46 (36%) Query: 4 VTVATWNVNSIRARIHNLAAW-----------IKENNPDIICLQET 38 + +AT+N++ L AW + E D+I LQE Sbjct: 53 LRIATYNIHG------GLGAWTASAAERIAVVLDELRADVIALQEV 92 >gi|134282657|ref|ZP_01769361.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 305] gi|226199100|ref|ZP_03794662.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei Pakistan 9] gi|254183777|ref|ZP_04890369.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1655] gi|134246214|gb|EBA46304.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 305] gi|184214310|gb|EDU11353.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1655] gi|225928875|gb|EEH24900.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei Pakistan 9] Length = 338 Score = 41.3 bits (95), Expect = 0.16, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 17/46 (36%) Query: 4 VTVATWNVNSIRARIHNLAAW-----------IKENNPDIICLQET 38 + +AT+N++ L AW + E D+I LQE Sbjct: 53 LRIATYNIHG------GLGAWTASAAERIAVVLDELRADVIALQEV 92 >gi|260781343|ref|XP_002585776.1| hypothetical protein BRAFLDRAFT_111142 [Branchiostoma floridae] gi|229270818|gb|EEN41787.1| hypothetical protein BRAFLDRAFT_111142 [Branchiostoma floridae] Length = 241 Score = 41.3 bits (95), Expect = 0.16, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 19/55 (34%), Gaps = 13/55 (23%) Query: 2 SVVT-----------VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDK 43 S + +AT NV + L + D+ CLQETK + Sbjct: 4 STMKMSAQSIRFKIQIATLNVRGLSQISKRQELDELLARKRVDMCCLQETKVARE 58 >gi|260781277|ref|XP_002585745.1| hypothetical protein BRAFLDRAFT_111271 [Branchiostoma floridae] gi|229270783|gb|EEN41756.1| hypothetical protein BRAFLDRAFT_111271 [Branchiostoma floridae] Length = 409 Score = 41.3 bits (95), Expect = 0.16, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 19/55 (34%), Gaps = 13/55 (23%) Query: 2 SVVT-----------VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDK 43 S + +AT NV + L + D+ CLQETK + Sbjct: 4 STMKMSAQSIRFKIQIATLNVRGLSQISKRQELDELLARKRVDMCCLQETKVARE 58 >gi|229917556|ref|YP_002886202.1| Endonuclease/exonuclease/phosphatase [Exiguobacterium sp. AT1b] gi|229468985|gb|ACQ70757.1| Endonuclease/exonuclease/phosphatase [Exiguobacterium sp. AT1b] Length = 1168 Score = 41.3 bits (95), Expect = 0.16, Method: Composition-based stats. Identities = 15/81 (18%), Positives = 27/81 (33%), Gaps = 10/81 (12%) Query: 185 KLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK 244 ++ + YS+ Y +S +DHI++S + I Sbjct: 978 QIFKGDLMTNMVEKVPAVDRYSYV-YQGNSQV------LDHILVSNRLAASTKIDMIHVN 1030 Query: 245 PRGWT---KPSDHTPVIVSLD 262 + SDH PV+ +D Sbjct: 1031 SDFTEMSGRASDHDPVLAQID 1051 >gi|183179612|ref|ZP_02957823.1| hypothetical protein A51_B2651 [Vibrio cholerae MZO-3] gi|183013023|gb|EDT88323.1| hypothetical protein A51_B2651 [Vibrio cholerae MZO-3] Length = 869 Score = 41.3 bits (95), Expect = 0.16, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 29/77 (37%), Gaps = 26/77 (33%) Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT------------------ 249 W Y S++ G +DH+++SP + + A D G Sbjct: 775 WSY---SFNDEVGA-LDHLLVSPSLKNKVVDAT-DWHINGAESTLFDYNDEFKGNLPKYN 829 Query: 250 ---KPSDHTPVIVSLDI 263 + SDH P ++ L+I Sbjct: 830 DQFRASDHDPAVLELNI 846 >gi|147858617|emb|CAN81007.1| hypothetical protein VITISV_011582 [Vitis vinifera] Length = 1152 Score = 41.3 bits (95), Expect = 0.16, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 18/45 (40%), Gaps = 4/45 (8%) Query: 217 KNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 N+ R+D ++SP PR SDH PV++ Sbjct: 671 NNQSWARLDRFLVSPSWLDHFSDVLQRRLPR---PLSDHFPVLLE 712 >gi|115704992|ref|XP_796769.2| PREDICTED: similar to endonuclease-reverse transcriptase [Strongylocentrotus purpuratus] gi|115952010|ref|XP_001187856.1| PREDICTED: similar to endonuclease-reverse transcriptase [Strongylocentrotus purpuratus] Length = 765 Score = 41.3 bits (95), Expect = 0.16, Method: Composition-based stats. Identities = 32/256 (12%), Positives = 64/256 (25%), Gaps = 20/256 (7%) Query: 3 VVTVATWNVNSIRAR--IHNLAAWIKENNPDIICLQETKT--EDKNFPFETLQSLNYHIE 58 V+ + TWNV +++ L + + DI+ L ET + E L + Sbjct: 112 VLNIGTWNVRTLKKAGHWDILLEEARRFDLDILGLCETHLTGTETLINKEEYSIL---LS 168 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + + + Q I +++ H Sbjct: 169 SRKDNTSREGVGIMISQQILHCLVSYEAISPRIITAKFNMKEGIMNIIQVYAPTSAHSEQ 228 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + YD I++ R + + + D+ + Y LE Sbjct: 229 ESDLFYDALQLHIQKVPRKENIIVIGDLNAKVGADHGVWAPTLGKYGLGQINRRGEKLLE 288 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 + + H ++ ++ ID I+ E + Sbjct: 289 FCMLHEMAVCNTYFQ-----HKECRRATWTSPRGHYRNQ-----IDFIITKLENIKTFQN 338 Query: 239 ARIDTKPRGWTKPSDH 254 SDH Sbjct: 339 C---RSYCSADIGSDH 351 >gi|270295490|ref|ZP_06201691.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270274737|gb|EFA20598.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 254 Score = 41.3 bits (95), Expect = 0.16, Method: Composition-based stats. Identities = 8/39 (20%), Positives = 19/39 (48%), Gaps = 2/39 (5%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +D++ ++ + + R+ + SDH P++V L Sbjct: 215 LDYVFVTKG--AKIDRYRVIQDKPENSYLSDHCPILVEL 251 >gi|209881833|ref|XP_002142354.1| endonuclease/exonuclease/phosphatase family protein [Cryptosporidium muris RN66] gi|209557960|gb|EEA08005.1| endonuclease/exonuclease/phosphatase family protein [Cryptosporidium muris RN66] Length = 750 Score = 41.3 bits (95), Expect = 0.16, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 28/74 (37%), Gaps = 19/74 (25%) Query: 2 SVVTVATWNV-NSIRARIHNL-------AAW----------IKENNPDIICLQETKTED- 42 S V +WN+ I A +W I + PDI+CLQE +TE Sbjct: 363 SRFKVLSWNILAEIYASQEAFPHCDAYMLSWTYRKTRIIVEILSHQPDIVCLQEVQTEHF 422 Query: 43 KNFPFETLQSLNYH 56 +F LQ Y Sbjct: 423 DDFFKPILQQYGYE 436 >gi|321458623|gb|EFX69688.1| hypothetical protein DAPPUDRAFT_113436 [Daphnia pulex] Length = 726 Score = 41.3 bits (95), Expect = 0.16, Method: Composition-based stats. Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 2/38 (5%) Query: 3 VVTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQET 38 ++ VA+ N+ I R+ L + N D+ICLQE Sbjct: 275 IMKVASINIARISTPERLQLLLNYCFSNEFDVICLQEV 312 >gi|218195535|gb|EEC77962.1| hypothetical protein OsI_17322 [Oryza sativa Indica Group] Length = 1104 Score = 41.3 bits (95), Expect = 0.16, Method: Composition-based stats. Identities = 39/261 (14%), Positives = 86/261 (32%), Gaps = 30/261 (11%) Query: 1 MSVVTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 MS ++V WNV + A+ + + ++ ++CLQE+K + + L Sbjct: 1 MSRLSVLVWNVRGLNNPAKRRVVKESVVNSHASVVCLQESKL--EVVDLLVIHEL----- 53 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 CG + VA+ + + ++ G + GN + Sbjct: 54 -CGLDFDDFVALPASHTRGGVIVAWKGSVFRGSQVHLGQWSVTAKLEWTAGNHSCFLTSV 112 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 ++KI +++ E + AGD+N+I D N + Sbjct: 113 YGPQDDNEKILFLEELAEIRG---ICGEVWLVAGDFNLIAAAADKNNSRVNRR------- 162 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 +N ++ + Y++ +++D +++S E Sbjct: 163 ---LMNAFRNKINELELKELYLFGRRYTWSSEQ----QIPTLVKLDRVLVSTEWEDAFPD 215 Query: 239 ARIDTKPRGWTKPSDHTPVIV 259 A + + SDH +++ Sbjct: 216 A--HLQALSSSS-SDHCALLL 233 >gi|330799773|ref|XP_003287916.1| hypothetical protein DICPUDRAFT_47628 [Dictyostelium purpureum] gi|325082050|gb|EGC35545.1| hypothetical protein DICPUDRAFT_47628 [Dictyostelium purpureum] Length = 576 Score = 41.3 bits (95), Expect = 0.16, Method: Composition-based stats. Identities = 49/321 (15%), Positives = 86/321 (26%), Gaps = 63/321 (19%) Query: 4 VTVA---TWNVNS-IRARIHNLAAWIKENNPDIICLQETK----TEDKNFPFETLQSL-- 53 + V TWN N R R +A I +PDIIC QE + T + F + Sbjct: 256 IKVMSYNTWNFNDPWRERRVKMADVILNESPDIICFQEIRYSSWTSEAPFKSSVRKGEER 315 Query: 54 ---------------NYHIETCGQKSYNGVAI-------------LSKYQPIEIVTHLPG 85 YH YN ++ I++ + Sbjct: 316 NQVQHIWKLLSERNQKYHFTYLPSMVYNTNTGLQFEGLAIFSKHPITDISSIKLSREVMN 375 Query: 86 DDLDVQARFIEATFTINTQTLRIGNLYLPHG-NPITSTKYDDKISWIKRFLRFASQRLEL 144 D Q + A + L I S + + + Sbjct: 376 ADDAHQRSLLRAQVYLKQHDLNINVFTSHFSLEAEGSKRNAYESLKYINEFPKPHLFMGD 435 Query: 145 EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL 204 A + ++ N D R+ + + D +R + Sbjct: 436 LNLEPSANAIQYLIGDYEINNHAGNLKDTWMEYSSRKLEENSNQDIYLDQLRNQVHSDCK 495 Query: 205 YSFWDYYAD-SWSKNKGI---RIDHIMLSPEATSLLHSARI---DTKPRGWT-------- 249 + DY ++ G RID++ S + + I + + Sbjct: 496 IT--DYLNGYTFPTLYGAPNKRIDYLFRSNDNNLKVLDFHIKGRCKEIPALSSSSSKTST 553 Query: 250 -------KPSDHTPVIVSLDI 263 PSDHT ++ + +I Sbjct: 554 NSDSNHLYPSDHTSIVTTFEI 574 >gi|254444166|ref|ZP_05057642.1| endonuclease/exonuclease/phosphatase family [Verrucomicrobiae bacterium DG1235] gi|198258474|gb|EDY82782.1| endonuclease/exonuclease/phosphatase family [Verrucomicrobiae bacterium DG1235] Length = 307 Score = 41.3 bits (95), Expect = 0.16, Method: Composition-based stats. Identities = 38/293 (12%), Positives = 72/293 (24%), Gaps = 54/293 (18%) Query: 3 VVTVATWNVNSIR--ARIHNLAA-------------------WIKENNPDIICLQETKTE 41 + VAT+N +R + + I PD++ +QE +E Sbjct: 30 TLRVATYN---LRNYLAMDRIVEGDFRVNYPKPESEKTVVRESILAVEPDLLAIQEIGSE 86 Query: 42 ------DKNFPFETLQSLNYHI--ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR 93 + E L Y + + + + T + + + Sbjct: 87 ELLLELRDDLANEGLVYEGYFLLEADDQTRKIGALWNGALKVRPIAHTDMSFPFFGDRKK 146 Query: 94 FIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGD 153 + L L + + D + R ++ F Sbjct: 147 IKRGLLELQLDDFGGEPLSLFVVHLKSRYTSDKRDPKSARRRTSEAEAARDRILERFPDP 206 Query: 154 YNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDA---IRATHDTHHLYSFWDY 210 N + LE + ++ + YS Sbjct: 207 SVSRFIIMGDLNDYRHTSSVRRFLERGDVRISVIQEARDESGLIWTHFYKKGGEYSL--- 263 Query: 211 YADSWSKNKGIRIDHIMLSPEATSL--LHSARIDTKPRGWTKPSDHTPVIVSL 261 ID+I+ SP + SA D++ + SDH V L Sbjct: 264 ------------IDYILCSPGLEDASEMKSAIYDSENYY--QGSDHRLVWTEL 302 >gi|147773403|emb|CAN73438.1| hypothetical protein VITISV_040987 [Vitis vinifera] Length = 228 Score = 41.3 bits (95), Expect = 0.16, Method: Composition-based stats. Identities = 16/129 (12%), Positives = 36/129 (27%), Gaps = 7/129 (5%) Query: 132 KRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191 ++ + + I A Y + +LE S + + Sbjct: 48 PEYVPYDVNGKYGQLFDIIAQRYKENMEERSLTLQKQLRRYVPISLEAEISSVVMNHCVL 107 Query: 192 TDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP 251 + +++ + R+D ++SP + I R Sbjct: 108 PSPLVDLPLQGGSFTW----SGGLYNQAWARLDRFLVSPSWLDQFSN-GIQK--RLPRPI 160 Query: 252 SDHTPVIVS 260 SDH P+++ Sbjct: 161 SDHFPILIE 169 >gi|148975846|ref|ZP_01812635.1| Endonuclease/exonuclease/phosphatase [Vibrionales bacterium SWAT-3] gi|145964591|gb|EDK29844.1| Endonuclease/exonuclease/phosphatase [Vibrionales bacterium SWAT-3] Length = 430 Score = 41.3 bits (95), Expect = 0.16, Method: Composition-based stats. Identities = 34/287 (11%), Positives = 84/287 (29%), Gaps = 45/287 (15%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNP---------DIICLQETKTEDKNFPFETLQS 52 + + + T+NV + + ++ + + D++ +QE + Sbjct: 165 NSINILTYNVW----LLPYIGEYMNDRDIRIAEAVKSHDVVFMQEVFRRENELRLNADMR 220 Query: 53 LNYHIETCG----QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108 L++ + + +++ + + D + T+ ++ Sbjct: 221 LHFQYVSHKLDGGGSNTYDGGVITYSKYPIVEQAQHVFDNCRGTDCAADKGVLYTKIIKD 280 Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQR-----LELEEPLIFAGDYNIIPQPHDC 163 Y + S + + R + L EP+IF GD+NI Sbjct: 281 SRPYHLFNLHLGSWNSREHRNIRMRQVGEILAFVEQLGLPENEPVIFGGDFNIAKHKFPL 340 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223 + ++ S + + + + R+ Sbjct: 341 DFTQMLRVLDLQEPPLKGSLAHSYDPLVNQNLSDSDQSAQE-----------------RL 383 Query: 224 DHIMLSPEATSLLHSARI------DTKPRGWTKPSDHTPVIVSLDIP 264 D+++ S + + S++I D G SDH V ++P Sbjct: 384 DYLLYSNNGSVVASSSKIEVLRNFDDDMWGVWDLSDHLAVSARFEVP 430 >gi|242771336|ref|XP_002477822.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500] gi|218721441|gb|EED20859.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500] Length = 1077 Score = 41.3 bits (95), Expect = 0.17, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 3/41 (7%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 ID + S + + S DTKP W DH P+ ++ Sbjct: 181 IDLVWASHNLANRVVSC--DTKPEWWYGA-DHVPISTQFNL 218 >gi|242827044|ref|XP_002488757.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500] gi|218712149|gb|EED11576.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500] Length = 1977 Score = 41.3 bits (95), Expect = 0.17, Method: Composition-based stats. Identities = 36/254 (14%), Positives = 68/254 (26%), Gaps = 19/254 (7%) Query: 26 KENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPG 85 + +I +QE + N SL + + N +K + + + Sbjct: 741 RALRASVIAIQEPWRNELNNTTHQPASLTHQLLYPKPNDNNNNTNNNKRARVALFVNKSI 800 Query: 86 DDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELE 145 + I + I +R + N Y I R F EL Sbjct: 801 NPASWSHTVISPDYQIL--HIRYQRCLHSNSNSEPHDLYIHNIYNEPRSTTFTHIDRELT 858 Query: 146 EPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY 205 +I+ + + W E ++ + + L Sbjct: 859 RLGCSRTTAHIVLGDMN-AHHPAWGGPGTKIDEQATELLEIMDRHGIELAT----EEGLV 913 Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP-SDHTPVIVSLDIP 264 ++ S S ID LS L + + + SDH P+ +DI Sbjct: 914 TW--ERGQSQST-----IDLTFLSTTLFHRL----VLHERADEIQHDSDHWPIRTQIDID 962 Query: 265 EPRKKQQDSTSQNM 278 P + + + Sbjct: 963 TPTHEPRRRRNWAA 976 >gi|148260431|ref|YP_001234558.1| endonuclease/exonuclease/phosphatase [Acidiphilium cryptum JF-5] gi|326403624|ref|YP_004283706.1| hypothetical protein ACMV_14770 [Acidiphilium multivorum AIU301] gi|146402112|gb|ABQ30639.1| Endonuclease/exonuclease/phosphatase [Acidiphilium cryptum JF-5] gi|325050486|dbj|BAJ80824.1| hypothetical protein ACMV_14770 [Acidiphilium multivorum AIU301] Length = 204 Score = 41.3 bits (95), Expect = 0.17, Method: Composition-based stats. Identities = 23/126 (18%), Positives = 45/126 (35%), Gaps = 8/126 (6%) Query: 4 VTVATWNVNSIR---ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 + + +WN+ +R A +AA I++ PD++ +QE + L + Sbjct: 1 MRLISWNL--LRRVGAEAREVAALIEDYRPDLMLMQE--ATESIAQVTDLCG-GWFYRAP 55 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 Q G+A+ S E T + + Q + N++L HG + Sbjct: 56 MQGRIYGLAVWSPAPLAEPGTVRLPASVMPGRVPPRLALLVEAQGITFANVHLSHGQMLN 115 Query: 121 STKYDD 126 + Sbjct: 116 RLQLRH 121 >gi|306832641|ref|ZP_07465780.1| RgfB protein [Streptococcus bovis ATCC 700338] gi|304425249|gb|EFM28376.1| RgfB protein [Streptococcus bovis ATCC 700338] Length = 276 Score = 41.3 bits (95), Expect = 0.17, Method: Composition-based stats. Identities = 43/276 (15%), Positives = 80/276 (28%), Gaps = 26/276 (9%) Query: 5 TVATWN------VNSIRARIHNLAAWIKENNPDIICLQE---------TKTED--KNFPF 47 T N NS++ ++ +LA I N D+ICLQE TK D + P Sbjct: 8 KFLTLNTHSWLEANSLK-KLFDLAETIYSENYDVICLQEINQDIRGLLTKEVDGYEKLPG 66 Query: 48 E-TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 L NY ++ G + I + + + ++ I + Sbjct: 67 SPALHRDNYALQLVNYLRSQGRYYYWSWAYNHIGYEKYNEGVVILSKTPIKVNDILVSDV 126 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 + + T+ D K + + E P+P Sbjct: 127 DDETDFHTRRVLVAETEIDQKPITVVSLHMSWFGKGFESEWQKLETALLDSPKPLVLMGD 186 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226 D + S LQ+ ++ + + +++DH+ Sbjct: 187 FNNPTDTAGYDMILNSPLDLQDSHKVAK-----KVQGDHTIIEDIDGWEGNKQSLKVDHV 241 Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 S + S+ + SDH + V L+ Sbjct: 242 FTSKGID--ILSSTVTFDGGEAPIVSDHFGLAVELN 275 >gi|260430974|ref|ZP_05784945.1| endonuclease/exonuclease/phosphatase family protein [Silicibacter lacuscaerulensis ITI-1157] gi|260414802|gb|EEX08061.1| endonuclease/exonuclease/phosphatase family protein [Silicibacter lacuscaerulensis ITI-1157] Length = 337 Score = 41.3 bits (95), Expect = 0.17, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 12/53 (22%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRG------------WTKPSDHTPVIVSLDI 263 +D+IM+SP+ + + RI R SDH PV + +D+ Sbjct: 285 LDYIMISPDLRARRPAWRIWHPFRDEHCWSVPELRDALVTASDHFPVTLDIDL 337 >gi|167622812|ref|YP_001673106.1| endonuclease/exonuclease/phosphatase [Shewanella halifaxensis HAW-EB4] gi|167352834|gb|ABZ75447.1| Endonuclease/exonuclease/phosphatase [Shewanella halifaxensis HAW-EB4] Length = 377 Score = 41.3 bits (95), Expect = 0.17, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 22/54 (40%), Gaps = 13/54 (24%) Query: 223 IDHIMLSPEATSLLHS-----ARIDTKPRGWTKPS--------DHTPVIVSLDI 263 +D+I+LS + H T+ R PS DH PVI +L I Sbjct: 322 LDYILLSADFDPSYHKSIAEVCDYHTEDRHLVNPSFERDSHSSDHAPVICTLRI 375 >gi|254828780|ref|ZP_05233467.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes FSL N3-165] gi|258601187|gb|EEW14512.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes FSL N3-165] Length = 256 Score = 41.3 bits (95), Expect = 0.17, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 31/93 (33%), Gaps = 3/93 (3%) Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230 D + + I H + SF D+ S N+ +ID+I +S Sbjct: 166 GDFNTEPDTPTYNFITKKYQDAQLISQKHAKGPIGSFHDFRPL-RSINELEKIDYIFVSE 224 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 E + + SDH PV +LD Sbjct: 225 EF--QVCTYETIVDEVDGFSASDHFPVTANLDW 255 >gi|270295842|ref|ZP_06202042.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270273246|gb|EFA19108.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 287 Score = 40.9 bits (94), Expect = 0.18, Method: Composition-based stats. Identities = 35/290 (12%), Positives = 74/290 (25%), Gaps = 66/290 (22%) Query: 6 VATWNVNSIRARIHNLAAWIKE--------------NNPDIICLQET-KTEDKNFPFETL 50 V ++N+ R NL + + DI+ QE + ++ + L Sbjct: 31 VMSFNI-----RYDNLEDSLDNWQYRKDRAANAIRFYDVDILGTQEVLHNQLEDL-KQRL 84 Query: 51 QSLN--------------YHIETCGQKSYN----GVAILSKYQPIEIVTHLPGDDLDVQA 92 Y + +N G LS+ + G + + Sbjct: 85 PEYGVIGVGREDGKEKGEYSALWYKKDRFNLLDSGYFWLSETPEVAGSKGWDGACERIAS 144 Query: 93 RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG 152 + + G + L P++ G Sbjct: 145 WAKLQDKVSGKEFFALNTHLDHVGVAA--------RREGISLMLDKVNELSGNLPVVVTG 196 Query: 153 DYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYA 212 D+N P+ + N E ++ + + A Y D Sbjct: 197 DFNASPESDVIKHVTDPSN-----PEHLTDARQASAIVYGPAWSFHDFGKIPY---DKRP 248 Query: 213 DSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 ID++ + + + + SDH P++V+++ Sbjct: 249 L---------IDYVFVRNGL--KVLRYGVLAETENNAFLSDHAPILVTVE 287 >gi|229141809|ref|ZP_04270337.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST26] gi|228641645|gb|EEK97948.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST26] Length = 352 Score = 40.9 bits (94), Expect = 0.18, Method: Composition-based stats. Identities = 47/274 (17%), Positives = 82/274 (29%), Gaps = 34/274 (12%) Query: 11 VNSIRARIHNLAAWIKENNPDIICLQET--K------TEDKNFPFETLQSL------NYH 56 VN + N+ ++++ N D LQE K + F + L NY Sbjct: 91 VN-----LKNMLSFLQNENSDFALLQEVDIKSLRSFDVNEHEFLKKGLPDYVSSFGKNYD 145 Query: 57 IETCGQKSYNGVAI-------LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 + N + SKY E R + I T+ + Sbjct: 146 TKWVPVPITNPMGYAEAGLSTFSKYTVQEAKRFQLPGMEPWPKRLFDLDQAIVEHTIPVN 205 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 N + + YD+ K+ + F + + GDY I+ + + Sbjct: 206 NGKHVRLVNLHLSAYDEGGKIRKQQVEFLKEYMNKHYKN---GDYVIMGGDWNQLVSDVQ 262 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 +D F E + +L + D + D +N ID ++S Sbjct: 263 LSDPKFVKERPEWLVELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVS 322 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 P + + K + SDH PV + Sbjct: 323 PN----VEIVNVQGKDLKFEN-SDHNPVSAVFKL 351 >gi|260781208|ref|XP_002585713.1| hypothetical protein BRAFLDRAFT_257725 [Branchiostoma floridae] gi|229270746|gb|EEN41724.1| hypothetical protein BRAFLDRAFT_257725 [Branchiostoma floridae] Length = 249 Score = 40.9 bits (94), Expect = 0.18, Method: Composition-based stats. Identities = 39/264 (14%), Positives = 75/264 (28%), Gaps = 24/264 (9%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSY 65 + T N+ + R + + +K DI+ L ETK + + Sbjct: 1 IGTLNIGTYRHKEEEILQIMKRRKLDILGLGETKLRGEIVGKDIGDG--------FTLIS 52 Query: 66 NGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYD 125 GV + + I+ D ++ + + Sbjct: 53 RGVKEGRLHARVAIIVGPRLKDNIQNITITNERIVSVQIKVKDNVYGFTQIYAPQQGRSE 112 Query: 126 DKISWIKRFLRFASQRLELEEPLIFAGDYN--IIPQPHDCYNPIIWENDACFTLEVRQSF 183 ++ L A +L I GD+N + + + + E + Sbjct: 113 EEKDSFYAQLETAISQLPSMTAHIVIGDFNGRVGRNRSGIESTLGPFGEETQNEEGERLI 172 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG-----IRIDHIMLSPEATSLLHS 238 H YS W+KN G ID+I+ S +++ Sbjct: 173 DFC---LRNSLAIMNGFFRHQYSHTMTRYR-WNKNIGQYDHVSIIDYILSSD--KRIIND 226 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 ++ G + SDH +I L+ Sbjct: 227 VKVMP---GESLDSDHRLLIADLN 247 >gi|148886652|ref|NP_001092156.1| tyrosyl-DNA phosphodiesterase 2 [Xenopus laevis] gi|281312450|sp|A5D8M0|TYDP2_XENLA RecName: Full=Tyrosyl-DNA phosphodiesterase 2; Short=Tyr-DNA phosphodiesterase 2; AltName: Full=5'-tyrosyl-DNA phosphodiesterase; Short=5'-Tyr-DNA phosphodiesterase; AltName: Full=TRAF and TNF receptor-associated protein homolog gi|146327082|gb|AAI41729.1| LOC100049743 protein [Xenopus laevis] Length = 371 Score = 40.9 bits (94), Expect = 0.18, Method: Composition-based stats. Identities = 37/278 (13%), Positives = 82/278 (29%), Gaps = 45/278 (16%) Query: 2 SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 S T TWN++ + RAR + + + PD++ LQE P + L Sbjct: 121 SHFTFLTWNIDGLDESNVAERARA--VCSCLALYTPDVVFLQEV------IPP-YCEYLK 171 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 + + N + ++ V + + I + Sbjct: 172 KRAVSYKIITGNEDEYFTAM-MLKKSRVKLISQEIVPYPSTLMMRNLLVANVNISGNSIC 230 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 + D +K+ + ++ + + + N Sbjct: 231 LMTSHLESTKDHSKERLKQLDTVLKKMMDAPPSATVIFGGDTNLRDQEVAKIGGLPNTIL 290 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM------- 227 V + K ++ +T + ++ Y+ +R D I+ Sbjct: 291 D---VWEFLGKPEHCRYTWDTKLNNNLRACYT------------SRLRFDRILYRASMEG 335 Query: 228 --LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + P+ +L+ + ++D PSDH ++ DI Sbjct: 336 SQVIPQFLNLVGTEKLDC----GRFPSDHWGLLCDFDI 369 >gi|239621676|ref|ZP_04664707.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis CCUG 52486] gi|317482419|ref|ZP_07941436.1| endonuclease/Exonuclease/phosphatase [Bifidobacterium sp. 12_1_47BFAA] gi|239515551|gb|EEQ55418.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis CCUG 52486] gi|316916079|gb|EFV37484.1| endonuclease/Exonuclease/phosphatase [Bifidobacterium sp. 12_1_47BFAA] Length = 370 Score = 40.9 bits (94), Expect = 0.18, Method: Composition-based stats. Identities = 33/258 (12%), Positives = 66/258 (25%), Gaps = 43/258 (16%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTED--KNFPFETLQSLNYHIETCGQ 62 V T+NV +A + +++ +++ LQET TED K ++ + + Sbjct: 150 RVMTFNVYKGQADPQAIVELVRDQRVEVLALQET-TEDFVKKLNEAGIEHYLPYAQVSSS 208 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 G + S + + + + G Sbjct: 209 DGVFGNGLWSATPLADPTDDDVNSSASFMPGGTVDMGGQQIRFVSVHTTAPVPG------ 262 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 W + R + IF GD+N + + Sbjct: 263 ---YWRQWKRSLDELGLMREHTDTRYIFMGDFNATYDHTPFRDFL--------------- 304 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 +S+ A + G IDH++L ++ Sbjct: 305 ------GDRFVDAARESGHGFTFSWPTNRA-AVPMFAG--IDHVVLDQGM--KAGQCKVV 353 Query: 243 TKPRGWTKPSDHTPVIVS 260 SDH ++ + Sbjct: 354 KVE-----GSDHAALLAT 366 >gi|294654552|ref|XP_002769996.1| DEHA2A06578p [Debaryomyces hansenii CBS767] gi|199428970|emb|CAR65373.1| DEHA2A06578p [Debaryomyces hansenii] Length = 523 Score = 40.9 bits (94), Expect = 0.18, Method: Composition-based stats. Identities = 17/103 (16%), Positives = 37/103 (35%), Gaps = 18/103 (17%) Query: 4 VTVATWNV---------------NSIR--ARIHNLAAWIKENNPDIICLQETK-TEDKNF 45 + + ++N+ N+++ R L + K + DI+CLQE + ++ Sbjct: 112 IKIMSYNILAQALIRRKLFPTSGNALKWSTRSQVLLSEFKHYDADILCLQELDFIQYNSY 171 Query: 46 PFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDL 88 + L L Y ++ + N ++ I H Sbjct: 172 WRKELGKLGYDMKYYRADTKNHGLAIAFKSDKFICKHQSFMYY 214 >gi|149190193|ref|ZP_01868468.1| hypothetical protein VSAK1_14887 [Vibrio shilonii AK1] gi|148835940|gb|EDL52902.1| hypothetical protein VSAK1_14887 [Vibrio shilonii AK1] Length = 301 Score = 40.9 bits (94), Expect = 0.18, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 3/41 (7%) Query: 223 IDHIMLSPEAT--SLLHSARIDTKPRGWTKPSDHTPVIVSL 261 IDHI++SPE + S SDH P+ + L Sbjct: 260 IDHIIVSPELRTSPAVQSLMPVEDVLKHQM-SDHCPLSIEL 299 >gi|23466288|ref|NP_696891.1| hypothetical protein BL1743 [Bifidobacterium longum NCC2705] gi|23327039|gb|AAN25527.1| hypothetical transmembrane protein with unknown function [Bifidobacterium longum NCC2705] Length = 370 Score = 40.9 bits (94), Expect = 0.18, Method: Composition-based stats. Identities = 33/258 (12%), Positives = 66/258 (25%), Gaps = 43/258 (16%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTED--KNFPFETLQSLNYHIETCGQ 62 V T+NV +A + +++ +++ LQET TED K ++ + + Sbjct: 150 RVMTFNVYKGQADPQAIVELVRDQRVEVLALQET-TEDFVKKLNEAGIEHYLPYAQVSSS 208 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 G + S + + + + G Sbjct: 209 DGVFGNGLWSATPLADPTDDDVNSSASFMPGGTVDMGGQQIRFVSVHTTAPVPG------ 262 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 W + R + IF GD+N + + Sbjct: 263 ---YWRQWKRSLDELGLMREHTDTRYIFMGDFNATYDHTPFRDFL--------------- 304 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 +S+ A + G IDH++L ++ Sbjct: 305 ------GDRFVDAARESGHGFTFSWPTNRA-AVPMFAG--IDHVVLDQGM--KAGQCKVV 353 Query: 243 TKPRGWTKPSDHTPVIVS 260 SDH ++ + Sbjct: 354 KVE-----GSDHAALLAT 366 >gi|118102264|ref|XP_001232516.1| PREDICTED: hypothetical protein isoform 1 [Gallus gallus] Length = 410 Score = 40.9 bits (94), Expect = 0.18, Method: Composition-based stats. Identities = 33/261 (12%), Positives = 68/261 (26%), Gaps = 30/261 (11%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDK--NFPFETLQSLNYHIETCGQKSYNGVAILSKY 74 RI + + + D++ LQE +E + + + +G+ + SK+ Sbjct: 29 RIRLIGDRLCQEGFDLVLLQEIWSERDYSDLKAKLGGCCPFSHYFRSGVIGSGLCVFSKF 88 Query: 75 QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI-----------GNLYLPHGNPITSTK 123 ++ + + + F + L + + Sbjct: 89 PILDTLLYQYSLNGYPYMLQHGDWFCGKSVGLVVVRIAEITFNIYVTHLHAEYSREKDAY 148 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 ++ +F + + ++ GD N+ P W E + Sbjct: 149 LPHRVVQAWELAQFICHTAKAADVVLLGGDLNMHPGDVGVRLLRGWTGLHDAFTEAKHFE 208 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 T + GIRID+I+ +S Sbjct: 209 GCEDGCTLIPNNCFTVKSELQ-----------PFPLGIRIDYILY-KAVSSFTVKCEELR 256 Query: 244 ----KPRGWTKP-SDHTPVIV 259 G P SDH V+ Sbjct: 257 TTTGTVPGMDIPYSDHEAVMA 277 >gi|149248640|ref|XP_001528707.1| hypothetical protein LELG_01227 [Lodderomyces elongisporus NRRL YB-4239] gi|146448661|gb|EDK43049.1| hypothetical protein LELG_01227 [Lodderomyces elongisporus NRRL YB-4239] Length = 390 Score = 40.9 bits (94), Expect = 0.18, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 2/52 (3%) Query: 214 SWSKNKGIRIDHIM-LSPEATSLLHSARIDTKPRG-WTKPSDHTPVIVSLDI 263 + G ID+I +SPE+ + +D + SDH PVI S I Sbjct: 338 GFGNATGYTIDYIWNMSPESGIKILGHEVDDNLFDQGFRFSDHRPVIASFSI 389 >gi|62858061|ref|NP_001016531.1| CCR4 carbon catabolite repression 4-like [Xenopus (Silurana) tropicalis] gi|89267365|emb|CAJ82796.1| CCR4 carbon catabolite repression 4-like (S. cerevisiae) [Xenopus (Silurana) tropicalis] gi|213627135|gb|AAI70786.1| CCR4 carbon catabolite repression 4-like (S. cerevisiae) [Xenopus (Silurana) tropicalis] Length = 458 Score = 40.9 bits (94), Expect = 0.18, Method: Composition-based stats. Identities = 40/265 (15%), Positives = 74/265 (27%), Gaps = 22/265 (8%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFE--TLQSLNYHIET--CGQKSYNGVAILS 72 R + + I PD++CLQE D F L L Y V + Sbjct: 202 RKYLILEEILMYQPDVLCLQEV---DHYFDTFQPILSRLGYQCTFLAKPWSPCLDVEHNN 258 Query: 73 KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIK 132 + L A+ + T+ T + I ++ +K Sbjct: 259 GPDGCALFFLQDRFRLVNSAKIRLSARTLKTNQVAIAETLQCCETGRLLC---FAVTHLK 315 Query: 133 RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192 + RL L+ + + + + R + L Sbjct: 316 ARTGWERFRLAQGSDLLHNLESITEGATVPLIICGDFNAEPTEEVYKRFASSSLNLNSAY 375 Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA-------RIDTKP 245 + ++ Y+ W S + +D+I S A ++SA +I Sbjct: 376 KLLSEDGESEPPYTTWKIRPTGESCHT---LDYIWYSQHAL-RVNSALGLPTEEQIGPNR 431 Query: 246 R-GWTKPSDHTPVIVSLDIPEPRKK 269 + PSDH ++ E + Sbjct: 432 LPSFNYPSDHLSLVCDFSFNEDPAR 456 >gi|67623175|ref|XP_667870.1| hypothetical protein [Cryptosporidium hominis TU502] gi|54659030|gb|EAL37629.1| hypothetical protein Chro.40217 [Cryptosporidium hominis] Length = 783 Score = 40.9 bits (94), Expect = 0.18, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 28/79 (35%), Gaps = 19/79 (24%) Query: 2 SVVTVATWNV-NSIRARIHNL-------AAW----------IKENNPDIICLQETKTED- 42 S V +WNV I A +W I + PDI+CLQE +TE Sbjct: 356 SRFKVFSWNVLAEIYASQEAFPHCDAYMLSWSYRKTRIIVEILSHQPDIVCLQEVQTEHF 415 Query: 43 KNFPFETLQSLNYHIETCG 61 +F LQ Y Sbjct: 416 DDFFKPVLQQYGYEGVYKQ 434 >gi|323447130|gb|EGB03078.1| hypothetical protein AURANDRAFT_68316 [Aureococcus anophagefferens] Length = 431 Score = 40.9 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 7/36 (19%), Positives = 15/36 (41%) Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 ++ W Y + +N G RID++++ Sbjct: 150 NGERFTCWHQYHNKRYENVGSRIDYVLVDRALFEAA 185 >gi|315921153|ref|ZP_07917393.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313695028|gb|EFS31863.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 269 Score = 40.9 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 35/277 (12%), Positives = 75/277 (27%), Gaps = 50/277 (18%) Query: 3 VVTVATWNVNS---IRARIHNLAAW---IKENNPDIICLQE----T-KTEDKNFPFETLQ 51 +V V ++N+ S + + + A IK+ NPD+ LQE T K E+ + + Sbjct: 29 LVKVMSYNIYSGQKVYSGKKGMEAIAQVIKKINPDLAGLQEFETKTNKVENADIIALMKE 88 Query: 52 SLNYHIETCGQKSYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 + ++ DL + Sbjct: 89 VTGMQYAFFVKTRDVDGGEYGNLILSKYPISDEVNYDLPRIETVEDVYPRSMGVVKTEKE 148 Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170 + + ++ + I + + ++ P+I GD+N + Sbjct: 149 GKNFYFGVTHLSHVGNETNRINQTSTILEKTKGMDAPMILTGDFNAL------------A 196 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230 + + + N + ID ++ +P Sbjct: 197 DSGPMKILYERFDIGCLNGNYGLTTGTPVPVKA-------------------IDFVLYTP 237 Query: 231 E--ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 + + D SDH PV+ + I + Sbjct: 238 DKGMAPKAYDVYYDAYVE-----SDHFPVVATFSIND 269 >gi|290990899|ref|XP_002678073.1| predicted protein [Naegleria gruberi] gi|284091684|gb|EFC45329.1| predicted protein [Naegleria gruberi] Length = 314 Score = 40.9 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 5/33 (15%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQET 38 + +W +N R H L + DIICLQE Sbjct: 21 ILSW-IN----RKHRLLDEFLSYHADIICLQEV 48 >gi|260172870|ref|ZP_05759282.1| Endonuclease/exonuclease/phosphatase [Bacteroides sp. D2] Length = 277 Score = 40.9 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 35/277 (12%), Positives = 75/277 (27%), Gaps = 50/277 (18%) Query: 3 VVTVATWNVNS---IRARIHNLAAW---IKENNPDIICLQE----T-KTEDKNFPFETLQ 51 +V V ++N+ S + + + A IK+ NPD+ LQE T K E+ + + Sbjct: 37 LVKVMSYNIYSGQKVYSGKKGMEAIAQVIKKINPDLAGLQEFETKTNKVENADIIALMKE 96 Query: 52 SLNYHIETCGQKSYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 + ++ DL + Sbjct: 97 VTGMQYAFFVKTRDVDGGEYGNLILSKYPISDEVNYDLPRIETVEDVYPRSMGVVKTEKE 156 Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170 + + ++ + I + + ++ P+I GD+N + Sbjct: 157 GKNFYFGVTHLSHVGNETNRINQTSTILEKTKGMDAPMILTGDFNAL------------A 204 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230 + + + N + ID ++ +P Sbjct: 205 DSGPMKILYERFDIGCLNGNYGLTTGTPVPVKA-------------------IDFVLYTP 245 Query: 231 E--ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 + + D SDH PV+ + I + Sbjct: 246 DKGMAPKAYDVYYDAYVE-----SDHFPVVATFSIND 277 >gi|303276925|ref|XP_003057756.1| predicted protein [Micromonas pusilla CCMP1545] gi|226460413|gb|EEH57707.1| predicted protein [Micromonas pusilla CCMP1545] Length = 600 Score = 40.9 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 6/54 (11%) Query: 7 ATWNVNSIRARIHNLAAWIKENNPDIICLQETKTED-KNFPFETLQSLNYHIET 59 +WN R N+ I ++ DI+CLQE +++ ++F L Y Sbjct: 273 LSWN-----YRRQNILKEIVMHDADILCLQEVQSDHFEDFFQGELGKHGYTSVY 321 >gi|50305037|ref|XP_452476.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49641609|emb|CAH01327.1| KLLA0C06248p [Kluyveromyces lactis] Length = 516 Score = 40.9 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 28/188 (14%), Positives = 50/188 (26%), Gaps = 3/188 (1%) Query: 21 LAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYHIETCGQKSYN-GVAILSKYQPIE 78 L K N D++CLQE + K+F L Y + + N GV I K + Sbjct: 151 LLNEFKYYNVDVLCLQEIDTVQYKSFWKMEFTKLGYMCQFHFNPTKNHGVLIAWKEDLFD 210 Query: 79 IVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFA 138 + + D IE T + + + I L + Sbjct: 211 MTDKMLIDYDKETTGAIEPRTTTKNVGMLLSLKFKKKVLEKYPDTKVSGIIIGTTHLFWH 270 Query: 139 SQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT 198 + + + + N + E D + + F + Sbjct: 271 PFGTYERTRQCYI-VLKKVKEFQNRINVLQNEKDGDNSHWPAFFCGDFNSQPFDAPYLSI 329 Query: 199 HDTHHLYS 206 Y+ Sbjct: 330 TSKPVEYT 337 >gi|302865833|ref|YP_003834470.1| endonuclease/exonuclease/phosphatase [Micromonospora aurantiaca ATCC 27029] gi|302568692|gb|ADL44894.1| Endonuclease/exonuclease/phosphatase [Micromonospora aurantiaca ATCC 27029] Length = 675 Score = 40.9 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 9/43 (20%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRG-WTKPSDHTPVIVSLDIP 264 IDH+ +SP T+ T+ R T+ SDH PV +++ +P Sbjct: 641 IDHVFVSPGLTA--------TEVRAPRTEASDHLPVTLTVTLP 675 >gi|253686638|ref|YP_003015828.1| Endonuclease/exonuclease/phosphatase [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251753216|gb|ACT11292.1| Endonuclease/exonuclease/phosphatase [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 381 Score = 40.9 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 28/90 (31%), Gaps = 31/90 (34%) Query: 200 DTHHLYSFWDYYADSWSKNKGIRI---DHIMLSPEATSLLHSARIDT------------- 243 Y++ Y+A KG R+ D+I LS + ++ Sbjct: 296 PEKERYTY--YFAGGK---KGARLNQLDYIFLSAPLHQAVVEWGVERRGIYNIDKIAAKE 350 Query: 244 ---------KPRGWTKP-SDHTPVIVSLDI 263 + W SDH + V +DI Sbjct: 351 GAEPVTPLPEVTSWDTAASDHAALWVEVDI 380 >gi|242047432|ref|XP_002461462.1| hypothetical protein SORBIDRAFT_02g003036 [Sorghum bicolor] gi|241924839|gb|EER97983.1| hypothetical protein SORBIDRAFT_02g003036 [Sorghum bicolor] Length = 1203 Score = 40.9 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 26/66 (39%), Gaps = 17/66 (25%) Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP-----SDHT 255 L+++ ++ + RIDH S + I+ PR + SDH Sbjct: 1046 HGRLFTW----SNERRRPTLERIDHAFASQD--------WIEAFPRHHLRCLSSDCSDHA 1093 Query: 256 PVIVSL 261 P+++ L Sbjct: 1094 PLLLEL 1099 >gi|147835479|emb|CAN72819.1| hypothetical protein VITISV_012036 [Vitis vinifera] Length = 818 Score = 40.9 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 15/119 (12%), Positives = 39/119 (32%), Gaps = 9/119 (7%) Query: 143 ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH 202 EE G + +N +++ + + + ++ + + Sbjct: 689 MWEEFGAIRGLWEDPWCLGGDFNITLFQKERSSQRRINSAMRRFAEIVDDLGLVDLPLQG 748 Query: 203 HLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 +++ + N+ R+D ++SP T+ R SDH P+++ Sbjct: 749 EEFTW-----NGGLNNQAWARLDKFLMSPSWLDQFSGV---TQSRLSRPISDHFPIVLE 799 >gi|66357216|ref|XP_625786.1| hypothetical protein [Cryptosporidium parvum Iowa II] gi|46226921|gb|EAK87887.1| hypothetical protein cgd4_1920 [Cryptosporidium parvum Iowa II] Length = 782 Score = 40.9 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 28/79 (35%), Gaps = 19/79 (24%) Query: 2 SVVTVATWNV-NSIRARIHNL-------AAW----------IKENNPDIICLQETKTED- 42 S V +WNV I A +W I + PDI+CLQE +TE Sbjct: 356 SRFKVFSWNVLAEIYASQEAFPHCDAYMLSWSYRKTRIIVEILSHQPDIVCLQEVQTEHF 415 Query: 43 KNFPFETLQSLNYHIETCG 61 +F LQ Y Sbjct: 416 DDFFKPVLQQYGYEGVYKQ 434 >gi|281349743|gb|EFB25327.1| hypothetical protein PANDA_007759 [Ailuropoda melanoleuca] Length = 127 Score = 40.9 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 19/101 (18%), Positives = 37/101 (36%), Gaps = 12/101 (11%) Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 E L M TD R H Y+F+ ++S RIDH + + + Sbjct: 22 ETMALNDTLDQMDLTDIFRTLHPETAEYTFFSGAHGTFS-----RIDHTLAHKDRLNKFK 76 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278 ++ SDH + L++ +K +++ + + Sbjct: 77 KIKLIPCI-----FSDHN--GMKLEVNHKKKTGKNTNAWRL 110 >gi|327470396|gb|EGF15852.1| RgfB protein [Streptococcus sanguinis SK330] Length = 271 Score = 40.9 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 28/254 (11%), Positives = 65/254 (25%), Gaps = 29/254 (11%) Query: 18 IHNLAAWIKENNPDIICLQETK--TEDKNFPFETLQSLNYHIETCGQKSYNGVAILS--- 72 ++ LA I + D+ICLQE TE + Y + + L Sbjct: 21 LNQLAERILQEKYDVICLQEVNQLTESEQVVQAPF----YQAVEGAIEIHQDHFALCLVE 76 Query: 73 ------KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDD 126 + G D+ + I + + + + + + P + Sbjct: 77 KLAEAGLDYHWSWAYNHIGFDIYNEGVAILSRKPLTPREVLVSEVNDPRDYHTRKVLLAE 136 Query: 127 KISWIK------RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + L + + + E + A + + + + Sbjct: 137 TEVEGQLLTITSCHLSWWDKGFQGEWAKLEAELLKVESPLVLMGDFNNPVGQQGYQTILA 196 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + + + WD ++ID++ S + + Sbjct: 197 SPLKLQDSHAVAREAIGEATVEGTIAGWD------DNKHALKIDYVFTSKGMD--VERSA 248 Query: 241 IDTKPRGWTKPSDH 254 + + SDH Sbjct: 249 VVFDGKETPVVSDH 262 >gi|298375120|ref|ZP_06985077.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_19] gi|298267620|gb|EFI09276.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_19] Length = 306 Score = 40.9 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 37/300 (12%), Positives = 72/300 (24%), Gaps = 52/300 (17%) Query: 3 VVTVATWNV-----------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51 + VAT+N+ N R +A ++ + DI QE K Sbjct: 22 TMVVATYNLRNANGGDSTNGNGWGQRYPYIAQIVQFHGFDIFGTQEGKYP--QLQDLRQA 79 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL-RIGN 110 Y G+ S + + + L RI Sbjct: 80 MPGYDYIGVGRDDGKQAGEHSAIFYRTDKFEVLEHGDFWLSEITDRPNKGWDAVLPRICT 139 Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170 G + + Q LI + Sbjct: 140 W----GEFRDKQTGFTFLFFNLHMDHVGVQARAESAKLILKKIKEFPKRLPAILTGDFNV 195 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230 + + ++ +++ R + ++ + + RIDH+ L+ Sbjct: 196 DQTSESYKLLDGSGIMRDSYEIADFRYAPNGT-----FNGFHPDRKNDS--RIDHLFLTK 248 Query: 231 EATSLLHSARIDTKPRGWT-------------------------KPSDHTPVIVSLDIPE 265 E + I T PSDH PV++ +++ + Sbjct: 249 EFE--VKKYGILTDTYRSEVKESAQKEQNGNFPKEVSLSKYEARTPSDHFPVMIVVEVKD 306 >gi|116669243|ref|YP_830176.1| 5'-nucleotidase domain-containing protein [Arthrobacter sp. FB24] gi|116609352|gb|ABK02076.1| 5'-Nucleotidase domain protein [Arthrobacter sp. FB24] Length = 1525 Score = 40.9 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 26/73 (35%), Gaps = 21/73 (28%) Query: 223 IDHIMLSPEATSLLHSARI---------------------DTKPRGWTKPSDHTPVIVSL 261 +DH++ +P A S++ A I + + SDH PV+V L Sbjct: 784 LDHVLATPGADSVVTGADIWNINSVESVALEYSRYNSNVTNYYAPDQFRASDHDPVVVGL 843 Query: 262 DIPEPRKKQQDST 274 D+P Sbjct: 844 DLPAVPVLPPSVD 856 >gi|227114004|ref|ZP_03827660.1| endonuclease/exonuclease/phosphatase family protein [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 381 Score = 40.9 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 28/90 (31%), Gaps = 31/90 (34%) Query: 200 DTHHLYSFWDYYADSWSKNKGIRI---DHIMLSPEATSLLHSARIDT------------- 243 Y++ Y++ KG R+ D+I LS + ++ Sbjct: 296 PEKERYTY--YFSGGK---KGARLNQLDYIFLSAPLHQAVVEWGVERRGIYNIDKIAAKE 350 Query: 244 ---------KPRGWTKP-SDHTPVIVSLDI 263 + W SDH + V +DI Sbjct: 351 GAEPVTPLPEVTSWDTAASDHAALWVEVDI 380 >gi|225441072|ref|XP_002264311.1| PREDICTED: hypothetical protein, partial [Vitis vinifera] Length = 695 Score = 40.9 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 16/167 (9%), Positives = 48/167 (28%), Gaps = 7/167 (4%) Query: 94 FIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGD 153 + + +G+ + + S + + +R EE G Sbjct: 510 VMWDKRVLEGLEFEVGSFSISCRFRNCEEGFVWVFSGLYGPSKGRERRELWEELAAIKGL 569 Query: 154 YNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD 213 +N +N + + + ++ + ++ + + +++ Sbjct: 570 WNDPWCIAGDFNVVRFPAETSNGRQMSTAMREFSSFIEEFELVDPPLGGGAFTWIGGEGG 629 Query: 214 SWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 + R+D + S + + A + SDH P+ + Sbjct: 630 ALKA----RLDRFLFSGDWEERVTGAM---QCLLTRPVSDHCPIRLD 669 >gi|147833202|emb|CAN64220.1| hypothetical protein VITISV_014001 [Vitis vinifera] Length = 1937 Score = 40.9 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 34/251 (13%), Positives = 68/251 (27%), Gaps = 32/251 (12%) Query: 13 SIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAI 70 I + ++ PD++CL ETK +D + Sbjct: 771 GINDCEKRKLIKGVVRNQKPDLVCLLETKVKDVSLQL------------VKSVGVGRFLN 818 Query: 71 LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISW 130 + L + +E + ++R N + S Sbjct: 819 WASVDARGAARGLLLFWDNRVLEKLEIESGEYSISVRFRNCADGFSWIFSGVYGPVIGSE 878 Query: 131 IKRFLRFASQRLE-LEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNM 189 + F E+P GD+N + P + N + + EV Sbjct: 879 KEDFWEELGAIRGLWEDPWCIRGDFNAVRFPEERRNALRLTTEMRRFTEVIG-------- 930 Query: 190 GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT 249 +R +++ + R+D ++S + PR Sbjct: 931 --ELGLRDFPLAGGPFTW----IGGLNSQAASRLDRFLISDPWEDHFSAITQSALPR--- 981 Query: 250 KPSDHTPVIVS 260 SDH+P+++ Sbjct: 982 LVSDHSPIVLE 992 >gi|89891525|ref|ZP_01203030.1| endonuclease/exonuclease/phosphatase family protein [Flavobacteria bacterium BBFL7] gi|89516299|gb|EAS18961.1| endonuclease/exonuclease/phosphatase family protein [Flavobacteria bacterium BBFL7] Length = 372 Score = 40.9 bits (94), Expect = 0.19, Method: Composition-based stats. Identities = 45/280 (16%), Positives = 80/280 (28%), Gaps = 51/280 (18%) Query: 2 SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQET--KTEDKNFPFETLQSLNYHI 57 S + + T NV ++ L I+E PD+I ET + ++ + + Y I Sbjct: 101 STIHIYTANV--LQKNKKGQELYNEIREQQPDLIVFTETNERWSNE-IKNKIGKEYPYKI 157 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 E +Y + + ++ + Q I Sbjct: 158 EQPQDNTYGMLVYSKLRLSDSEIKFKVDPNIPSIESKVMMENGKQFQLYAIHPTPPMP-- 215 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + + A + P+I GD+N + W + T Sbjct: 216 ----QHNPMSTDRDQELILTAMSSYDSNIPVIILGDFNDV----------AWSDSTQLTK 261 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 + + GF + A + +DHI++SPE L Sbjct: 262 TIGKLLDLRIGRGFFNTYHAQYPLMR-----------------WPLDHILISPEF--RLK 302 Query: 238 SARIDTKPRGWTKPSDHTPVIVSL----DIPEPRKKQQDS 273 A G SDH P L D+ ++ + S Sbjct: 303 DAG-----TGVDFESDHFPSWAVLTFEPDLASEQRPAEPS 337 >gi|327485101|gb|AEA79508.1| Extracellular deoxyribonuclease Xds [Vibrio cholerae LMA3894-4] Length = 869 Score = 40.9 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 24/76 (31%) Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSA---RI-----------------DTKPRG 247 W Y S++ G +DH+++SP + A I K + Sbjct: 775 WSY---SFNDEVGA-LDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKD 830 Query: 248 WTKPSDHTPVIVSLDI 263 + SDH P ++ L+I Sbjct: 831 QFRASDHDPAVLELNI 846 >gi|262401910|ref|ZP_06078475.1| extracellular nuclease-related protein [Vibrio sp. RC586] gi|262351882|gb|EEZ01013.1| extracellular nuclease-related protein [Vibrio sp. RC586] Length = 870 Score = 40.9 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 24/76 (31%) Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSA---RI-----------------DTKPRG 247 W Y S++ G +DH+++SP + A I K + Sbjct: 773 WSY---SFNDEVGA-LDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKD 828 Query: 248 WTKPSDHTPVIVSLDI 263 + SDH P ++ L+I Sbjct: 829 QFRASDHDPAVLELNI 844 >gi|262190835|ref|ZP_06049057.1| extracellular nuclease-related protein [Vibrio cholerae CT 5369-93] gi|262033284|gb|EEY51800.1| extracellular nuclease-related protein [Vibrio cholerae CT 5369-93] Length = 869 Score = 40.9 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 24/76 (31%) Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSA---RI-----------------DTKPRG 247 W Y S++ G +DH+++SP + A I K + Sbjct: 775 WSY---SFNDEVGA-LDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKD 830 Query: 248 WTKPSDHTPVIVSLDI 263 + SDH P ++ L+I Sbjct: 831 QFRASDHDPAVLELNI 846 >gi|261211177|ref|ZP_05925466.1| extracellular nuclease-related protein [Vibrio sp. RC341] gi|260839678|gb|EEX66289.1| extracellular nuclease-related protein [Vibrio sp. RC341] Length = 867 Score = 40.9 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 24/76 (31%) Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSA---RI-----------------DTKPRG 247 W Y S++ G +DH+++SP + A I K + Sbjct: 773 WSY---SFNDEVGA-LDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKD 828 Query: 248 WTKPSDHTPVIVSLDI 263 + SDH P ++ L+I Sbjct: 829 QFRASDHDPAVLELNI 844 >gi|229521687|ref|ZP_04411105.1| extracellular nuclease-related protein [Vibrio cholerae TM 11079-80] gi|229341281|gb|EEO06285.1| extracellular nuclease-related protein [Vibrio cholerae TM 11079-80] Length = 869 Score = 40.9 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 24/76 (31%) Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSA---RI-----------------DTKPRG 247 W Y S++ G +DH+++SP + A I K + Sbjct: 775 WSY---SFNDEVGA-LDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKD 830 Query: 248 WTKPSDHTPVIVSLDI 263 + SDH P ++ L+I Sbjct: 831 QFRASDHDPAVLELNI 846 >gi|229524601|ref|ZP_04414006.1| extracellular nuclease-related protein [Vibrio cholerae bv. albensis VL426] gi|229338182|gb|EEO03199.1| extracellular nuclease-related protein [Vibrio cholerae bv. albensis VL426] Length = 869 Score = 40.9 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 24/76 (31%) Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSA---RI-----------------DTKPRG 247 W Y S++ G +DH+++SP + A I K + Sbjct: 775 WSY---SFNDEVGA-LDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKD 830 Query: 248 WTKPSDHTPVIVSLDI 263 + SDH P ++ L+I Sbjct: 831 QFRASDHDPAVLELNI 846 >gi|229527450|ref|ZP_04416842.1| extracellular nuclease-related protein [Vibrio cholerae 12129(1)] gi|229335082|gb|EEO00567.1| extracellular nuclease-related protein [Vibrio cholerae 12129(1)] Length = 869 Score = 40.9 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 24/76 (31%) Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSA---RI-----------------DTKPRG 247 W Y S++ G +DH+++SP + A I K + Sbjct: 775 WSY---SFNDEVGA-LDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKD 830 Query: 248 WTKPSDHTPVIVSLDI 263 + SDH P ++ L+I Sbjct: 831 QFRASDHDPAVLELNI 846 >gi|254285815|ref|ZP_04960777.1| hypothetical protein A33_2558 [Vibrio cholerae AM-19226] gi|150423997|gb|EDN15936.1| hypothetical protein A33_2558 [Vibrio cholerae AM-19226] Length = 869 Score = 40.9 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 24/76 (31%) Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSA---RI-----------------DTKPRG 247 W Y S++ G +DH+++SP + A I K + Sbjct: 775 WSY---SFNDEVGA-LDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKD 830 Query: 248 WTKPSDHTPVIVSLDI 263 + SDH P ++ L+I Sbjct: 831 QFRASDHDPAVLELNI 846 >gi|153825148|ref|ZP_01977815.1| hypothetical protein A5A_2794 [Vibrio cholerae MZO-2] gi|149741294|gb|EDM55336.1| hypothetical protein A5A_2794 [Vibrio cholerae MZO-2] Length = 869 Score = 40.9 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 24/76 (31%) Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSA---RI-----------------DTKPRG 247 W Y S++ G +DH+++SP + A I K + Sbjct: 775 WSY---SFNDEVGA-LDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKD 830 Query: 248 WTKPSDHTPVIVSLDI 263 + SDH P ++ L+I Sbjct: 831 QFRASDHDPAVLELNI 846 >gi|153830066|ref|ZP_01982733.1| hypothetical protein A59_2694 [Vibrio cholerae 623-39] gi|148874465|gb|EDL72600.1| hypothetical protein A59_2694 [Vibrio cholerae 623-39] Length = 400 Score = 40.9 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 24/76 (31%) Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSA---RI-----------------DTKPRG 247 W Y S++ G +DH+++SP + A I K + Sbjct: 306 WSY---SFNDEVGA-LDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKD 361 Query: 248 WTKPSDHTPVIVSLDI 263 + SDH P ++ L+I Sbjct: 362 QFRASDHDPAVLELNI 377 >gi|227082737|ref|YP_002811288.1| extracellular nuclease-related protein [Vibrio cholerae M66-2] gi|298500556|ref|ZP_07010360.1| conserved hypothetical protein [Vibrio cholerae MAK 757] gi|227010625|gb|ACP06837.1| extracellular nuclease-related protein [Vibrio cholerae M66-2] gi|297540725|gb|EFH76782.1| conserved hypothetical protein [Vibrio cholerae MAK 757] Length = 869 Score = 40.9 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 24/76 (31%) Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSA---RI-----------------DTKPRG 247 W Y S++ G +DH+++SP + A I K + Sbjct: 775 WSY---SFNDEVGA-LDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKD 830 Query: 248 WTKPSDHTPVIVSLDI 263 + SDH P ++ L+I Sbjct: 831 QFRASDHDPAVLELNI 846 >gi|5668810|gb|AAD46036.1|AC007519_21 Contains similarity to gb|M74161 inositol polyphosphate 5-phosphatase from Homo sapiens and contains a PF|00783 inositol polyphosphate phosphatase catalytic domain [Arabidopsis thaliana] gi|48527527|gb|AAT45895.1| phospholipid-specific inositol polyphosphate 5-phosphatase [Arabidopsis thaliana] Length = 331 Score = 40.9 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 37/280 (13%), Positives = 67/280 (23%), Gaps = 30/280 (10%) Query: 4 VTVATWNVNSIRARIHNLAAWI-KENNPD--IICLQET-KTEDKNF-------PFETLQS 52 + + TWN+N +L + KE D ++ LQE K E L Sbjct: 53 IRIITWNMNG-NVSYEDLVELVGKERKFDLLVVGLQEAPKANVDQLLQTASSPTHELLGK 111 Query: 53 LNYHIE--TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 + + V G + + + + I Sbjct: 112 AKLQSVQLYLFGPKNSHTLVKELKAERYSVGGCGGLIGRKKGAVAIRINYDDIKMVFISC 171 Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170 H + + + ++ GD N Q + Sbjct: 172 HLSAHAKKVD----QRNTELRHIANSLLPRDKRKRDLTVWLGDLNYRIQDVSNHPVRSLI 227 Query: 171 NDACFT---------LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI 221 + + E + T + T+ + S DY + Sbjct: 228 QNHLQSVLVSKDQLLQEAERGEIFKGYSEGTLGFKPTYKYNVGSS--DYDTSHKIRVPAW 285 Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 D I+ + T + + SDH PV L Sbjct: 286 -TDRILFKIQDTDNIQATLHSYDSIDQVYGSDHKPVKADL 324 >gi|42562585|ref|NP_175182.2| 5PTASE11 (INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 11); hydrolase/ phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase/ phosphatidylinositol-3,5-bisphosphate 5-phosphatase/ phosphatidylinositol-4,5-bisphosphate 5-phosphatase [Arabidopsis thaliana] gi|67460994|sp|Q5EAF2|IP5PB_ARATH RecName: Full=Type I inositol-1,4,5-trisphosphate 5-phosphatase 11; Short=At5PTase11 gi|58743294|gb|AAW81725.1| At1g47510 [Arabidopsis thaliana] gi|61656149|gb|AAX49377.1| At1g47510 [Arabidopsis thaliana] gi|332194058|gb|AEE32179.1| Type I inositol-1,4,5-trisphosphate 5-phosphatase 11 [Arabidopsis thaliana] Length = 334 Score = 40.9 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 37/280 (13%), Positives = 67/280 (23%), Gaps = 30/280 (10%) Query: 4 VTVATWNVNSIRARIHNLAAWI-KENNPD--IICLQET-KTEDKNF-------PFETLQS 52 + + TWN+N +L + KE D ++ LQE K E L Sbjct: 56 IRIITWNMNG-NVSYEDLVELVGKERKFDLLVVGLQEAPKANVDQLLQTASSPTHELLGK 114 Query: 53 LNYHIE--TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 + + V G + + + + I Sbjct: 115 AKLQSVQLYLFGPKNSHTLVKELKAERYSVGGCGGLIGRKKGAVAIRINYDDIKMVFISC 174 Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170 H + + + ++ GD N Q + Sbjct: 175 HLSAHAKKVD----QRNTELRHIANSLLPRDKRKRDLTVWLGDLNYRIQDVSNHPVRSLI 230 Query: 171 NDACFT---------LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI 221 + + E + T + T+ + S DY + Sbjct: 231 QNHLQSVLVSKDQLLQEAERGEIFKGYSEGTLGFKPTYKYNVGSS--DYDTSHKIRVPAW 288 Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 D I+ + T + + SDH PV L Sbjct: 289 -TDRILFKIQDTDNIQATLHSYDSIDQVYGSDHKPVKADL 327 >gi|147674583|ref|YP_001218114.1| hypothetical protein VC0395_A2198 [Vibrio cholerae O395] gi|262170130|ref|ZP_06037819.1| extracellular nuclease-related protein [Vibrio cholerae RC27] gi|146316466|gb|ABQ21005.1| hypothetical protein VC0395_A2198 [Vibrio cholerae O395] gi|227014509|gb|ACP10719.1| extracellular nuclease-related protein [Vibrio cholerae O395] gi|262021538|gb|EEY40250.1| extracellular nuclease-related protein [Vibrio cholerae RC27] Length = 869 Score = 40.9 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 24/76 (31%) Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSA---RI-----------------DTKPRG 247 W Y S++ G +DH+++SP + A I K + Sbjct: 775 WSY---SFNDEVGA-LDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKD 830 Query: 248 WTKPSDHTPVIVSLDI 263 + SDH P ++ L+I Sbjct: 831 QFRASDHDPAVLELNI 846 >gi|254226796|ref|ZP_04920369.1| hypothetical protein VCV51_1756 [Vibrio cholerae V51] gi|125620689|gb|EAZ49050.1| hypothetical protein VCV51_1756 [Vibrio cholerae V51] Length = 869 Score = 40.9 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 24/76 (31%) Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSA---RI-----------------DTKPRG 247 W Y S++ G +DH+++SP + A I K + Sbjct: 775 WSY---SFNDEVGA-LDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKD 830 Query: 248 WTKPSDHTPVIVSLDI 263 + SDH P ++ L+I Sbjct: 831 QFRASDHDPAVLELNI 846 >gi|121729036|ref|ZP_01682037.1| hypothetical protein VCV52_2576 [Vibrio cholerae V52] gi|121628684|gb|EAX61155.1| hypothetical protein VCV52_2576 [Vibrio cholerae V52] Length = 869 Score = 40.9 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 24/76 (31%) Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSA---RI-----------------DTKPRG 247 W Y S++ G +DH+++SP + A I K + Sbjct: 775 WSY---SFNDEVGA-LDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKD 830 Query: 248 WTKPSDHTPVIVSLDI 263 + SDH P ++ L+I Sbjct: 831 QFRASDHDPAVLELNI 846 >gi|15642616|ref|NP_232249.1| extracellular nuclease-related protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121588108|ref|ZP_01677856.1| hypothetical protein VC274080_2619 [Vibrio cholerae 2740-80] gi|153819030|ref|ZP_01971697.1| hypothetical protein A5C_2696 [Vibrio cholerae NCTC 8457] gi|153821574|ref|ZP_01974241.1| hypothetical protein A5E_2936 [Vibrio cholerae B33] gi|229507327|ref|ZP_04396832.1| extracellular nuclease-related protein [Vibrio cholerae BX 330286] gi|229509749|ref|ZP_04399230.1| extracellular nuclease-related protein [Vibrio cholerae B33] gi|229516874|ref|ZP_04406320.1| extracellular nuclease-related protein [Vibrio cholerae RC9] gi|229606833|ref|YP_002877481.1| extracellular nuclease-related protein [Vibrio cholerae MJ-1236] gi|254851160|ref|ZP_05240510.1| extracellular nuclease-related protein [Vibrio cholerae MO10] gi|255744412|ref|ZP_05418364.1| extracellular nuclease-related protein [Vibrio cholera CIRS 101] gi|262158475|ref|ZP_06029590.1| extracellular nuclease-related protein [Vibrio cholerae INDRE 91/1] gi|9657210|gb|AAF95762.1| extracellular nuclease-related protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121547651|gb|EAX57748.1| hypothetical protein VC274080_2619 [Vibrio cholerae 2740-80] gi|126510411|gb|EAZ73005.1| hypothetical protein A5C_2696 [Vibrio cholerae NCTC 8457] gi|126520959|gb|EAZ78182.1| hypothetical protein A5E_2936 [Vibrio cholerae B33] gi|229345937|gb|EEO10909.1| extracellular nuclease-related protein [Vibrio cholerae RC9] gi|229353223|gb|EEO18162.1| extracellular nuclease-related protein [Vibrio cholerae B33] gi|229354832|gb|EEO19753.1| extracellular nuclease-related protein [Vibrio cholerae BX 330286] gi|229369488|gb|ACQ59911.1| extracellular nuclease-related protein [Vibrio cholerae MJ-1236] gi|254846865|gb|EET25279.1| extracellular nuclease-related protein [Vibrio cholerae MO10] gi|255737937|gb|EET93330.1| extracellular nuclease-related protein [Vibrio cholera CIRS 101] gi|262029636|gb|EEY48285.1| extracellular nuclease-related protein [Vibrio cholerae INDRE 91/1] Length = 869 Score = 40.9 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 24/76 (31%) Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSA---RI-----------------DTKPRG 247 W Y S++ G +DH+++SP + A I K + Sbjct: 775 WSY---SFNDEVGA-LDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKD 830 Query: 248 WTKPSDHTPVIVSLDI 263 + SDH P ++ L+I Sbjct: 831 QFRASDHDPAVLELNI 846 >gi|298204351|gb|ADI61824.1| endonuclease-reverse transcriptase [Bombyx mori] Length = 1061 Score = 40.9 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 27/237 (11%), Positives = 56/237 (23%), Gaps = 16/237 (6%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI---ETCGQKSYNGVAILSKYQPI 77 +A + N D+ L ET D+ E + + + + Sbjct: 27 VARELHRYNVDVAALSETHVADEGELVEVGAGYTFFWKGTAVSETRHSGVGFAIKNHLIK 86 Query: 78 EIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF 137 + + V + + + L + I Y + + Sbjct: 87 RLEEYPVHISDRVTTLRLHLDKDNYLNVISVYAPTLDKSDDIKDKFYGEVTLCLDSINAR 146 Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA 197 L + DY P + ++ L + + Sbjct: 147 EQVLLLGDFNARVGRDYEAWPGVLGRHGVGNMNSNGQLLLSLCAQYGLAITNAMFRLAAK 206 Query: 198 THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDH 254 ++ + W ID+ ++ S + I RG SDH Sbjct: 207 YKT-----TWMHPRSKHWHL-----IDYAIVRQRDFSQVQ---ITRVMRGAHCWSDH 250 >gi|254504315|ref|ZP_05116466.1| endonuclease/exonuclease/phosphatase family [Labrenzia alexandrii DFL-11] gi|222440386|gb|EEE47065.1| endonuclease/exonuclease/phosphatase family [Labrenzia alexandrii DFL-11] Length = 237 Score = 40.9 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 3/41 (7%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +D I+ SPE T + A + SDH PV L + Sbjct: 193 LDRIITSPEFT--VQKAGVHKSKTARI-ASDHLPVWAELAL 230 Score = 39.0 bits (89), Expect = 0.83, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 5/40 (12%) Query: 3 VVTVATWNVN-SI----RARIHNLAAWIKENNPDIICLQE 37 ++ + ++N+ SI R R I E D+I LQE Sbjct: 1 MLKIGSYNIQKSIGVDARRRPDRTLKVIGELQCDVIALQE 40 >gi|297192706|ref|ZP_06910104.1| polynucleotide adenyltransferase [Streptomyces pristinaespiralis ATCC 25486] gi|297151462|gb|EFH31179.1| polynucleotide adenyltransferase [Streptomyces pristinaespiralis ATCC 25486] Length = 401 Score = 40.9 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 9/44 (20%) Query: 4 VTVATWNV-----NSIR----ARIHNLAAWIKENNPDIICLQET 38 + V TWN +S R R L ++E + D+I LQE Sbjct: 117 LRVLTWNTLWDRYDSDRIATAVRRPLLIDALREADADVIALQEV 160 >gi|206976682|ref|ZP_03237587.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus H3081.97] gi|217962556|ref|YP_002341128.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus AH187] gi|206745168|gb|EDZ56570.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus H3081.97] gi|217063640|gb|ACJ77890.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus AH187] Length = 352 Score = 40.9 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 47/274 (17%), Positives = 82/274 (29%), Gaps = 34/274 (12%) Query: 11 VNSIRARIHNLAAWIKENNPDIICLQET--K------TEDKNFPFETLQSL------NYH 56 VN + N+ ++++ N D LQE K + F + L NY Sbjct: 91 VN-----LKNMLSFLQNENSDFALLQEVDIKSLRSFDVNEHEFLKKGLPDYVSSFGKNYD 145 Query: 57 IETCGQKSYNGVAI-------LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 + N + SKY E R + I T+ + Sbjct: 146 TKWVPVPITNPMGYAEAGLSTFSKYTVQEAKRFQLPGMEPWPKRLFDLDRAIVEHTIPVN 205 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 N + + YD+ K+ + F + + GDY I+ + + Sbjct: 206 NGKHVRLVNLHLSAYDEGGKIRKQQVEFLKEYMNKHYKN---GDYVIMGGDWNQLVSDVQ 262 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 +D F E + +L + D + D +N ID ++S Sbjct: 263 LSDPKFVKERPEWLVELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVS 322 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 P + + K + SDH PV + Sbjct: 323 PN----VEIVNVQGKDLKFEN-SDHNPVSAVFKL 351 >gi|147788645|emb|CAN69756.1| hypothetical protein VITISV_008645 [Vitis vinifera] Length = 1196 Score = 40.9 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 11/60 (18%), Positives = 23/60 (38%), Gaps = 9/60 (15%) Query: 201 THHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 +++ + N+ R+D ++SP + PR SDH P+++ Sbjct: 682 QGGEFTW-----NGGQNNQVWARLDRFLVSPSWXDQYNGISQCRLPR---PVSDHFPIML 733 >gi|147772713|emb|CAN76071.1| hypothetical protein VITISV_004551 [Vitis vinifera] Length = 1367 Score = 40.9 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 10/58 (17%), Positives = 22/58 (37%), Gaps = 7/58 (12%) Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 Y++ + R+D ++S E S + ++ SDH P+++ Sbjct: 681 GSYTWC----GGLNNRSASRLDWFLVSEEWESHFSN---LSQSLLPKPISDHAPILLD 731 >gi|242010076|ref|XP_002425802.1| Type II inositol-1,4,5-trisphosphate 5-phosphatase precursor, putative [Pediculus humanus corporis] gi|212509735|gb|EEB13064.1| Type II inositol-1,4,5-trisphosphate 5-phosphatase precursor, putative [Pediculus humanus corporis] Length = 893 Score = 40.9 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 20/139 (14%), Positives = 36/139 (25%), Gaps = 10/139 (7%) Query: 6 VATWNVNSIRARIHNLAAWIKENN------PDI--ICLQETKTEDKNFPFETLQSLNYHI 57 + TWNVN A + +L+ W+ N PDI + QE + F F + Sbjct: 234 IGTWNVNGQPAAV-SLSDWLTTTNPEYPDVPDIYAVGFQELDLSKEAFLFNETPREGEWL 292 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR-IGNLYLPHG 116 E N ++ + + + ++ I G Sbjct: 293 EAVSNALQNHKSVTYHKICLVRLVGMMLIVFVQDKHIDHVRNVVSDTVGTGIMGKMGNKG 352 Query: 117 NPITSTKYDDKISWIKRFL 135 + Sbjct: 353 GIGVRFDFYATSMCFVNSH 371 >gi|288930875|ref|YP_003434935.1| hypothetical protein Ferp_0486 [Ferroglobus placidus DSM 10642] gi|288893123|gb|ADC64660.1| hypothetical protein Ferp_0486 [Ferroglobus placidus DSM 10642] Length = 1665 Score = 40.9 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 12/173 (6%), Positives = 37/173 (21%), Gaps = 10/173 (5%) Query: 39 KTEDKNFPFETLQS--LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIE 96 K + E ++ YH + S++ + + + + + + + Sbjct: 1492 KWHQLDITLEDVEGNVKTYHYKVRWVGSWSNPVEVKQSTAGDTTSKVCRYVTENVRKCGY 1551 Query: 97 ATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI 156 T + R + + W + + + G + Sbjct: 1552 KTEEVCRNEFRCWD------EKKCGWHKECSKPWWCFWCSEKCEWKYSCKTERKCGWKPV 1605 Query: 157 IPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWD 209 E + ++ + Y+ W Sbjct: 1606 CRSERKYKCWYEPVRKYTCWTEPVERYKCWNERKCGWKPVCR--SERKYTCWT 1656 >gi|229199222|ref|ZP_04325900.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus m1293] gi|228584239|gb|EEK42379.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus m1293] Length = 352 Score = 40.9 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 45/274 (16%), Positives = 81/274 (29%), Gaps = 34/274 (12%) Query: 11 VNSIRARIHNLAAWIKENNPDIICLQET--K------TEDKNFPFETLQSL------NYH 56 VN + N+ ++++ N D LQE K + F + L NY Sbjct: 91 VN-----LKNMLSFLQNENSDFALLQEVDIKSLRSFDVNEHEFLKKGLPDYVSSFGKNYD 145 Query: 57 IETCGQKSYNGVAI-------LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 + N + SKY R + I T+ + Sbjct: 146 TKWVPVPITNPMGYAEAGLSTFSKYTVQTAKRFQLPGMEPWPKRLFDLDRAIVEHTIPVN 205 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 N + + YD+ K+ + + + + GDY I+ + + Sbjct: 206 NGKHVRLVNLHLSAYDEGGKIRKQQVEYLKEYMNKHYEK---GDYVIMGGDWNQLVSDVQ 262 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 +D F E + +L + D + D +N ID ++S Sbjct: 263 LSDPKFVKERPEWLVELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVS 322 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 P + + K + SDH PV + Sbjct: 323 PN----VEIVNVQGKDLKFEN-SDHNPVSAVFKL 351 >gi|156052389|ref|XP_001592121.1| hypothetical protein SS1G_06360 [Sclerotinia sclerotiorum 1980] gi|154704140|gb|EDO03879.1| hypothetical protein SS1G_06360 [Sclerotinia sclerotiorum 1980 UF-70] Length = 311 Score = 40.9 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 32/261 (12%), Positives = 69/261 (26%), Gaps = 44/261 (16%) Query: 32 IICLQET-KTEDKNFPFETLQSLNYHI------------------ETCGQKSYNGVAILS 72 ICLQE ++ + + Y ++ V + Sbjct: 73 FICLQEVLHSQLVDIHDVLNEGPGYKWSRLGVGRDDGKQSGEYSPIFYRPAVWDLVLYKT 132 Query: 73 KYQPIEIVTHLPGDDLDVQARFI--EATFTINTQTLRIGNLYLPHGNPITSTKYDDKISW 130 + G D + + + + + +L + PI+ K + I Sbjct: 133 YWLSETPDKPSFGWDAGCIRLVTLGIFRHRLTNEIVVVMSTHLDNSGPISRQKSAELILE 192 Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG 190 + A L GD+N P S + ++ Sbjct: 193 KVNHYKNAYAPAALLLA----GDFNSPPDDEAYKTMTS-------------STSTMADIR 235 Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT- 249 + ++ + Y N RID I + + + + + Sbjct: 236 DLVPEVKRYGNEMTFTSFGY-----VDNTPSRIDFIFSAKDTMAKYGIYAVLSNRYDDEV 290 Query: 250 KPSDHTPVIVSLDIPEPRKKQ 270 SDH V+ +++ R ++ Sbjct: 291 YLSDHRAVVADIEVSSTRARE 311 >gi|21232830|ref|NP_638747.1| hypothetical protein XCC3401 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66767099|ref|YP_241861.1| hypothetical protein XC_0763 [Xanthomonas campestris pv. campestris str. 8004] gi|188990191|ref|YP_001902201.1| putative nuclease / phosphatase [Xanthomonas campestris pv. campestris str. B100] gi|21114655|gb|AAM42671.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66572431|gb|AAY47841.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. 8004] gi|167731951|emb|CAP50137.1| putative nuclease / phosphatase [Xanthomonas campestris pv. campestris] Length = 245 Score = 40.9 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 15/95 (15%), Positives = 29/95 (30%), Gaps = 14/95 (14%) Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 + + + + R + +++F + D IDHI++S Sbjct: 160 HPNVMLMGDFNCVADRPEMQALYRHTRLQPPSCVVHTFPSWRPD-------RAIDHILVS 212 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 I+ SDH V + L +P Sbjct: 213 DSLV-------IEHTEAIPAAFSDHLAVGMDLRVP 240 >gi|321461027|gb|EFX72063.1| hypothetical protein DAPPUDRAFT_111147 [Daphnia pulex] Length = 448 Score = 40.9 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 41/261 (15%), Positives = 77/261 (29%), Gaps = 43/261 (16%) Query: 4 VTVATWNVNSI-RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62 + + WN + RA++ ++ NP I+ L ET +++ + N + Sbjct: 6 IKILQWNARGLFRAKLQEFRENLRSVNPLIVFLSETHWKNEYTIK--FSAYN----SYLL 59 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 + ++ I T++ + + +N + + ++Y P+GN Sbjct: 60 NRPSQGGGVAILVKKAIQTNILTLPNLPNLEAVGVSVKLNDSFIDLISVYCPNGN----- 114 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 I GD+N H + ++C Sbjct: 115 --------QCNDQEINLLFNTPRNKAIIGGDFNS----HSEVSDDFHTTNSCGRKISEFL 162 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 T T YS ID + + + L I Sbjct: 163 LTDPNWTLSTPRNLNTRPNSRDYSSST-------------IDLTFTTSDLSPL---TSIH 206 Query: 243 TKPRGWTKPSDHTPVIVSLDI 263 T P SDH PVI+ +D+ Sbjct: 207 TGPYWS---SDHLPVIIDIDL 224 >gi|222106133|ref|YP_002546924.1| hypothetical protein Avi_5005 [Agrobacterium vitis S4] gi|221737312|gb|ACM38208.1| conserved hypothetical protein [Agrobacterium vitis S4] Length = 245 Score = 40.9 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 3/43 (6%) Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +R+DH+++S + AR+ P + SDH P++V++ I Sbjct: 206 LRLDHVLISGGL--NILEARVIDTPLAR-RASDHLPLLVTMQI 245 Score = 40.9 bits (94), Expect = 0.21, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 5/42 (11%) Query: 2 SVVTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQET 38 S+ + T+N++S R +A I DI+CLQE Sbjct: 3 SIFRLLTYNIHSCIGTDRRLDPARIAEVIVATEADIVCLQEV 44 >gi|108761648|ref|YP_634768.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus xanthus DK 1622] gi|108465528|gb|ABF90713.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus xanthus DK 1622] Length = 287 Score = 40.9 bits (94), Expect = 0.20, Method: Composition-based stats. Identities = 10/46 (21%), Positives = 18/46 (39%), Gaps = 13/46 (28%) Query: 221 IRIDHIMLSPEA---TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +RID+++ S + + SDH PV+ L + Sbjct: 234 LRIDYVLACDAFTFVASRVLRVDV----------SDHYPVVADLRL 269 Score = 39.0 bits (89), Expect = 0.73, Method: Composition-based stats. Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 2/36 (5%) Query: 4 VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQET 38 + V T+N+ S AR + +A I+ PD++ LQE Sbjct: 41 LRVMTFNIQSG-ARGLERVAHVIRAAVPDVVALQEV 75 >gi|20803864|emb|CAD31442.1| HYPOTHETICAL PROTEIN [Mesorhizobium loti R7A] Length = 66 Score = 40.9 bits (94), Expect = 0.21, Method: Composition-based stats. Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 3/39 (7%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKP---SDHTPVI 258 IDH+ +SP H I R + SDH PV+ Sbjct: 18 IDHVFISPNLVPGGHDFMILALDRTIERFLEVSDHRPVL 56 >gi|304383804|ref|ZP_07366262.1| endonuclease/exonuclease/phosphatase family protein [Prevotella marshii DSM 16973] gi|304335060|gb|EFM01332.1| endonuclease/exonuclease/phosphatase family protein [Prevotella marshii DSM 16973] Length = 325 Score = 40.9 bits (94), Expect = 0.21, Method: Composition-based stats. Identities = 30/262 (11%), Positives = 58/262 (22%), Gaps = 40/262 (15%) Query: 30 PDIICLQET---KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGD 86 PD++ L E L++ Y+ G+ + Y P Sbjct: 80 PDVVALCEVENDTVMTDLTKKSLLRAAGYNYVMTHSADRRGMDVALLYSPATFAPIRDCT 139 Query: 87 DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEE 146 + T I L + + + R ++ Sbjct: 140 FRVPPPEGMRPTRDI----LYVAGRLPAGDTLHIIVVHAPSRMGGEPQTRPYRCKVAQCI 195 Query: 147 PLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYS 206 + P+ + E +S ++ Y Sbjct: 196 VAVTDSIRRQSPEAKILIAGDFNDYS---DNEAVRSIVAKGMADVSEHATGKQGAGGTYR 252 Query: 207 FWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKP--------------------- 245 + + +DH+ SP + I+ P Sbjct: 253 YQGQWGS---------LDHLFASPSLLPFIQECYINDAPFLTEDDPTYGGRMPHRSFRGT 303 Query: 246 RGWTKPSDHTPVIVSLDIPEPR 267 R SDH P++V L + Sbjct: 304 RYVGGISDHLPLVVHLRWEKSE 325 >gi|321452193|gb|EFX63643.1| hypothetical protein DAPPUDRAFT_335237 [Daphnia pulex] Length = 206 Score = 40.9 bits (94), Expect = 0.21, Method: Composition-based stats. Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 2/37 (5%) Query: 4 VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQET 38 + VA+ N+ I R+ L + N D+ICLQE Sbjct: 1 MKVASINIARISTPERLQLLLNYCVSNEFDVICLQEV 37 >gi|321452110|gb|EFX63579.1| hypothetical protein DAPPUDRAFT_335317 [Daphnia pulex] Length = 206 Score = 40.9 bits (94), Expect = 0.21, Method: Composition-based stats. Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 2/37 (5%) Query: 4 VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQET 38 + VA+ N+ I R+ L + N D+ICLQE Sbjct: 1 MKVASINIARISTPERLQLLLNYCVSNEFDVICLQEV 37 >gi|321450763|gb|EFX62654.1| hypothetical protein DAPPUDRAFT_120011 [Daphnia pulex] Length = 271 Score = 40.9 bits (94), Expect = 0.21, Method: Composition-based stats. Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 2/37 (5%) Query: 4 VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQET 38 + VA+ N+ I R+ L + N D+ICLQE Sbjct: 1 MKVASINIARISTPERLQLLLNYCVSNEFDVICLQEV 37 >gi|298204343|gb|ADI61820.1| endonuclease-reverse transcriptase [Bombyx mori] Length = 1013 Score = 40.9 bits (94), Expect = 0.21, Method: Composition-based stats. Identities = 44/282 (15%), Positives = 81/282 (28%), Gaps = 24/282 (8%) Query: 5 TVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKT-EDKNFPFETLQSLNYHIETCG 61 + TWNV + ++H L I ++ L ET + +F + Sbjct: 58 KIGTWNVRGLMQPGKLHILEKEITRCELNVCGLSETHWKSNGHFLTDAHAIY---FSGNN 114 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 KS NGVAI+ + V V R + L I +Y P + Sbjct: 115 TKSSNGVAIVIPKGINDCVMGYE----SVSDRVLSIRIKAAPINLDIIQVYAPTSSSSDK 170 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 D + ++ L + E Sbjct: 171 DLEDFYCDLENTMSKIPNRELLI-VMGDLNSKIGANANQLSQTAGKFGLGQRNERGERLL 229 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F N+ ++ H LY++ +N+ ID+IM+S + + + Sbjct: 230 EFAADHNLVICNSFFQNHPR-RLYTWISSTGH---RNQ---IDYIMISSRWKTSVRNTHT 282 Query: 242 DTKPRGWTKPSDHTPVIVSLDI---PEPRKKQQDSTSQNMKP 280 SDH ++ ++ + + +Q P Sbjct: 283 LPSA---DCSSDHELLVATIQLKLKAARKVDKQRRIQPTDLP 321 >gi|241958790|ref|XP_002422114.1| inositol phosphosphingolipids phospholipase C, putative; phospholipase C, putative [Candida dubliniensis CD36] gi|223645459|emb|CAX40116.1| inositol phosphosphingolipids phospholipase C, putative [Candida dubliniensis CD36] Length = 438 Score = 40.9 bits (94), Expect = 0.21, Method: Composition-based stats. Identities = 37/302 (12%), Positives = 82/302 (27%), Gaps = 38/302 (12%) Query: 4 VTVATWNVNSIR-------ARIHNLAAWIK-----ENNPDIICLQETKTEDKNFPFETLQ 51 + + T+N ++ R+ +A + + + DI+ LQE E+ + + Sbjct: 20 IKLLTFNTWGLKFISKHRKERLRAIADALANPKSPDEDYDIVALQEIWCEEDWQYLDLVC 79 Query: 52 SLNY---HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108 Y + G S G+A+LSK E + + A F + + + + Sbjct: 80 RPRYPYRRVFKAGIVSGPGLAVLSKISIAETFLYRFPINGRPSAFFRGDFYVGKSIAVTM 139 Query: 109 GN--------------LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDY 154 ++ + F + + +I GD Sbjct: 140 FQPHHPDILPIALLNSHMHAPYGSGDASYSTHRACQAWDFAKLVRMLKKAGYAVIQVGDL 199 Query: 155 NIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADS 214 N P + + + T ++ + + Sbjct: 200 NSKPDSLPYKLFTVEGGLTDSWNVLNADNVVPNDQIATLSLEDQISLAGV-TCNSRLNTW 258 Query: 215 WSKNKGI---RIDHIMLSPE----ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPR 267 R+D+ ++ + + P + SDH V L I Sbjct: 259 RESRPLWEACRLDYALIDASNITPVAAQVKFVDKLPPPLSCSY-SDHFAYSVDLVIRPKE 317 Query: 268 KK 269 ++ Sbjct: 318 ER 319 >gi|150009697|ref|YP_001304440.1| hypothetical protein BDI_3112 [Parabacteroides distasonis ATCC 8503] gi|255013008|ref|ZP_05285134.1| hypothetical protein B2_03828 [Bacteroides sp. 2_1_7] gi|298374104|ref|ZP_06984062.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_19] gi|149938121|gb|ABR44818.1| conserved hypothetical protein with endonuclease/exonuclease/phosphatase family domain [Parabacteroides distasonis ATCC 8503] gi|298268472|gb|EFI10127.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_19] Length = 280 Score = 40.9 bits (94), Expect = 0.21, Method: Composition-based stats. Identities = 8/39 (20%), Positives = 18/39 (46%), Gaps = 2/39 (5%) Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 RID+I ++ ++ + + SDH P+++ Sbjct: 241 RIDYIFVTKGI--QVNKYGTLNECQYGHFSSDHFPIMIE 277 >gi|284989389|ref|YP_003407943.1| endonuclease/exonuclease/phosphatase [Geodermatophilus obscurus DSM 43160] gi|284062634|gb|ADB73572.1| Endonuclease/exonuclease/phosphatase [Geodermatophilus obscurus DSM 43160] Length = 257 Score = 40.9 bits (94), Expect = 0.21, Method: Composition-based stats. Identities = 11/41 (26%), Positives = 22/41 (53%), Gaps = 6/41 (14%) Query: 4 VTVATWNV-NSI-----RARIHNLAAWIKENNPDIICLQET 38 + +AT+N+ + R + LA +K+ + D++ LQE Sbjct: 1 MRIATFNILHGRSPVDDRVDVERLATAVKDLDADVLGLQEV 41 >gi|114704450|ref|ZP_01437358.1| putative Endonuclease/Exonuclease/phosphatase family protein [Fulvimarina pelagi HTCC2506] gi|114539235|gb|EAU42355.1| putative Endonuclease/Exonuclease/phosphatase family protein [Fulvimarina pelagi HTCC2506] Length = 248 Score = 40.9 bits (94), Expect = 0.21, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 7/42 (16%) Query: 3 VVTVATWNVNSI--RARIHN----LAAWIKENNPDIICLQET 38 + + +WN++ R R N +A I+ PDI+ LQE Sbjct: 11 TLRIVSWNIHGAIGRRRRPNPERTIAE-IERMAPDILILQEV 51 >gi|72390874|ref|XP_845731.1| RNA-editing complex protein MP100 [Trypanosoma brucei TREU927] gi|62175829|gb|AAX69956.1| RNA-editing complex protein MP100 [Trypanosoma brucei] gi|70802267|gb|AAZ12172.1| RNA-editing complex protein MP100 [Trypanosoma brucei brucei strain 927/4 GUTat10.1] Length = 894 Score = 40.9 bits (94), Expect = 0.21, Method: Composition-based stats. Identities = 32/288 (11%), Positives = 74/288 (25%), Gaps = 32/288 (11%) Query: 2 SVVTVATWNV-------------------NSIRARIHNLAAWIKENNPDIICLQETKTED 42 + + + TWNV S + R +A I+E + D++ +QE E Sbjct: 616 ASLKLLTWNVMFDRYSGKPTPLGMPGIDWCSPK-RYPVIAKIIEEEDADVVGMQEV--EP 672 Query: 43 KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN 102 + F + + L + + LP ++ Sbjct: 673 VFWEFLSKRPLIRQRYYFSCGHMSPAIAPWGVLMLIHRRRLPVQSINYLNVPAWTNHVSL 732 Query: 103 TQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD 162 + + ++ S + + GD + +D Sbjct: 733 MPVVGLKMVHGTVHIAAAHLLAPYTKSHENARTSQDTALRHHMTKTLGGGDVVTMGDFND 792 Query: 163 CYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR 222 ++ D F+ + +++ R Sbjct: 793 WPTNEFIMPHESQYVDCWPVLHPNNPGKTMDETNTFCKLKVEEMFFGRSDKVFLRSR--R 850 Query: 223 I----DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEP 266 + H++ + ++A + PSDH V ++ + P Sbjct: 851 LVPVEAHLVGTRSVNDENNNA----DAPAYLFPSDHYGVSITFSLKLP 894 >gi|307178840|gb|EFN67403.1| Protein angel-like protein 2 [Camponotus floridanus] Length = 480 Score = 40.9 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 29/79 (36%), Gaps = 24/79 (30%) Query: 3 VVTVATWNV----------------N----SIRARIHNLAAWIKENNPDIICLQETKTED 42 ++ + ++N+ N S + R L I+E + +IICLQE ++ Sbjct: 87 ILRLLSFNILAQNLLEDHSYLYQDHNKKALSWKIRKPLLIQEIREADANIICLQE--MQE 144 Query: 43 KNFPFET--LQSLNYHIET 59 + + L Y Sbjct: 145 DHLLDFVIPFKQLGYEYLY 163 >gi|242065810|ref|XP_002454194.1| hypothetical protein SORBIDRAFT_04g026455 [Sorghum bicolor] gi|241934025|gb|EES07170.1| hypothetical protein SORBIDRAFT_04g026455 [Sorghum bicolor] Length = 1026 Score = 40.9 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 2/43 (4%) Query: 1 MSVVTVATWNVNSIRARIHNLA--AWIKENNPDIICLQETKTE 41 MS WNV + +R + + ++CLQETK + Sbjct: 4 MSDNKFLFWNVRGLNSRASRVCVRDVVILEAVSVVCLQETKVQ 46 >gi|45185974|ref|NP_983690.1| ACR288Wp [Ashbya gossypii ATCC 10895] gi|74694735|sp|Q75BI3|CCR4_ASHGO RecName: Full=Glucose-repressible alcohol dehydrogenase transcriptional effector; AltName: Full=Carbon catabolite repressor protein 4; AltName: Full=Cytoplasmic deadenylase gi|44981764|gb|AAS51514.1| ACR288Wp [Ashbya gossypii ATCC 10895] Length = 736 Score = 40.9 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 33/292 (11%), Positives = 62/292 (21%), Gaps = 47/292 (16%) Query: 17 RIHNLAAWIKENNPDIICLQET--KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKY 74 R L + DIICLQE KT ++ F L+ Y + + Sbjct: 429 RREKLKDEVLAYQTDIICLQEVESKTYEE-FWLPILEKQGYSGIFHAKTRARTMQSKDAK 487 Query: 75 QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYD-----DKIS 129 + + + ++ + + + Sbjct: 488 KVDGCCIFYKNSEFTAVFKDAIDFSSVWMKHKKFQRTEDYLNRAMNKDNVALIIKLRHER 547 Query: 130 WIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL--Q 187 + + + + + + Sbjct: 548 TGEHVWVVTTHLHWDPHFNDVKTFQVAVMLDYIEKLLKQHGGVGSPQDKKKIPLVICGDF 607 Query: 188 NMGFTDAIRATHDTHHLYSFWDYYADSW----SKN--KGIR------------------- 222 N A+ +T + S D + KN G+ Sbjct: 608 NSQLDSAVVELFNTGSVRSHKDIEGRDFGYMSQKNFAHGLALKSSYGSIGELPFTNLSPT 667 Query: 223 ----IDHIMLS-PEATSLLHSARIDTKPRGW-------TKPSDHTPVIVSLD 262 ID+I S ID PSDH P++ + Sbjct: 668 FTDVIDYIWYSTQALRVRGLLGEIDPAYAAKFIGLPNDKIPSDHIPLLARFE 719 >gi|323335993|gb|EGA77269.1| Ngl2p [Saccharomyces cerevisiae Vin13] Length = 482 Score = 40.9 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 28/192 (14%), Positives = 49/192 (25%), Gaps = 3/192 (1%) Query: 17 RIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNY--HIETCGQKSYNGVAILSK 73 R L K N D+ICLQE + ++F + L Y K++ + + Sbjct: 109 RSKVLLNEFKYYNXDVICLQEIDHIQFQSFWKDEFSKLGYDGQYYRNATKNHGVAIMWRR 168 Query: 74 YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKR 133 ++ L D + T T N + + + I Sbjct: 169 ELFHQVDKMLIDYDKESSESISTRTTTNNVGLVLALKFSEKVLSNLGKKSSKKCGILIGT 228 Query: 134 FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTD 193 F E + + N + END + + F Sbjct: 229 THLFWHPFGTYERTRQCYIVLKKMKEFMHRVNVLQNENDGDLSHWFPFFCGDFNSQPFDT 288 Query: 194 AIRATHDTHHLY 205 + Y Sbjct: 289 PYLSMTSKPVHY 300 >gi|229072559|ref|ZP_04205761.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus F65185] gi|229082318|ref|ZP_04214781.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock4-2] gi|228700750|gb|EEL53273.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock4-2] gi|228710535|gb|EEL62508.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus F65185] Length = 352 Score = 40.9 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 43/267 (16%), Positives = 78/267 (29%), Gaps = 29/267 (10%) Query: 18 IHNLAAWIKENNPDIICLQET--K------TEDKNFPFETLQSL------NYHIETCGQK 63 + N+ ++++ N D LQE K + F + L NY + Sbjct: 93 LKNMLSFLQNENSDFALLQEVDIKSLRSFDVNEHEFLKKGLPDYVSSFGKNYDTKWVPVP 152 Query: 64 SYNGVAI-------LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 N + SKY E R + I + + N Sbjct: 153 ITNPMGYAEAGLSTFSKYTVQEAKRFQLPGMEPWPKRLFDLDRAIVEYKIPVNNGKHVRL 212 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + + YD+ K+ + + + + GDY I+ + +D F Sbjct: 213 VNLHLSAYDEGGKIRKQQVEYLKEYMNKHYEN---GDYVIMGGDWNQLVSNAQLSDPKFV 269 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 E + +L + D + D +N ID ++SP + Sbjct: 270 KERPEWLVELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN----V 325 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263 + K + SDH PV + Sbjct: 326 EIVNVQGKDLKFEN-SDHNPVSAVFKL 351 >gi|229147624|ref|ZP_04275968.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST24] gi|296505509|ref|YP_003667209.1| endonuclease/exonuclease/phosphatase family protein [Bacillus thuringiensis BMB171] gi|228635833|gb|EEK92319.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST24] gi|296326561|gb|ADH09489.1| endonuclease/exonuclease/phosphatase family protein [Bacillus thuringiensis BMB171] Length = 352 Score = 40.9 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 43/267 (16%), Positives = 78/267 (29%), Gaps = 29/267 (10%) Query: 18 IHNLAAWIKENNPDIICLQET--K------TEDKNFPFETLQSL------NYHIETCGQK 63 + N+ ++++ N D LQE K + F + L NY + Sbjct: 93 LKNMLSFLQNENSDFALLQEVDIKSLRSFDVNEHEFLKKGLPDYVSSFGKNYDTKWVPVP 152 Query: 64 SYNGVAI-------LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 N + SKY E R + I + + N Sbjct: 153 ITNPMGYAEAGLSTFSKYTVQEAKRFQLPGMEPWPKRLFDLDRAIVEYKIPVNNGKHVRL 212 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + + YD+ K+ + + + + GDY I+ + +D F Sbjct: 213 VNLHLSAYDEGGKIRKQQVEYLKEYMNKHYEN---GDYVIMGGDWNQLVSNAQLSDPKFV 269 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 E + +L + D + D +N ID ++SP + Sbjct: 270 KERPEWLVELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN----V 325 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263 + K + SDH PV + Sbjct: 326 EIVNVQGKDLKFEN-SDHNPVSAVFKL 351 >gi|206970057|ref|ZP_03231010.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus AH1134] gi|218234375|ref|YP_002369878.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus B4264] gi|228955337|ref|ZP_04117345.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229153262|ref|ZP_04281440.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus m1550] gi|229181366|ref|ZP_04308695.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus 172560W] gi|206734634|gb|EDZ51803.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus AH1134] gi|218162332|gb|ACK62324.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus B4264] gi|228602102|gb|EEK59594.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus 172560W] gi|228629866|gb|EEK86517.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus m1550] gi|228804470|gb|EEM51081.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 352 Score = 40.9 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 43/267 (16%), Positives = 78/267 (29%), Gaps = 29/267 (10%) Query: 18 IHNLAAWIKENNPDIICLQET--K------TEDKNFPFETLQSL------NYHIETCGQK 63 + N+ ++++ N D LQE K + F + L NY + Sbjct: 93 LKNMLSFLQNENSDFALLQEVDIKSLRSFDVNEHEFLKKGLPDYVSSFGKNYDTKWVPVP 152 Query: 64 SYNGVAI-------LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 N + SKY E R + I + + N Sbjct: 153 ITNPMGYAEAGLSTFSKYTVQEAKRFQLPGMEPWPKRLFDLDRAIVEYKIPVNNGKHVRL 212 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + + YD+ K+ + + + + GDY I+ + +D F Sbjct: 213 VNLHLSAYDEGGKIRKQQVEYLKEYMNKHYEN---GDYVIMGGDWNQLVSNAQLSDPKFV 269 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 E + +L + D + D +N ID ++SP + Sbjct: 270 KERPEWLVELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN----V 325 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263 + K + SDH PV + Sbjct: 326 EIVNVQGKDLKFEN-SDHNPVSAVFKL 351 >gi|157960646|ref|YP_001500680.1| endonuclease/exonuclease/phosphatase [Shewanella pealeana ATCC 700345] gi|157845646|gb|ABV86145.1| Endonuclease/exonuclease/phosphatase [Shewanella pealeana ATCC 700345] Length = 379 Score = 40.9 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 21/54 (38%), Gaps = 13/54 (24%) Query: 223 IDHIMLSPEATSLLHS-----ARIDTKPRGWTKPS--------DHTPVIVSLDI 263 +D+I+LS + + T+ R PS DH PV +L I Sbjct: 324 LDYILLSADFDPSFDNSVAEVCDYHTEDRHLVNPSFERDSQSSDHAPVTCTLRI 377 >gi|229513544|ref|ZP_04403008.1| extracellular nuclease-related protein [Vibrio cholerae TMA 21] gi|229349421|gb|EEO14377.1| extracellular nuclease-related protein [Vibrio cholerae TMA 21] Length = 869 Score = 40.9 bits (94), Expect = 0.22, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 30/76 (39%), Gaps = 24/76 (31%) Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR---I-----------------DTKPRG 247 W Y S++ G +DH+++SP + + A I K + Sbjct: 775 WSY---SFNDEVGA-LDHLLVSPSLKTKVVDASDWHINGAESTLFDYNDEFKGNLPKYKD 830 Query: 248 WTKPSDHTPVIVSLDI 263 + SDH P ++ L+I Sbjct: 831 QFRASDHDPAVLELNI 846 >gi|260950683|ref|XP_002619638.1| hypothetical protein CLUG_00797 [Clavispora lusitaniae ATCC 42720] gi|238847210|gb|EEQ36674.1| hypothetical protein CLUG_00797 [Clavispora lusitaniae ATCC 42720] Length = 476 Score = 40.9 bits (94), Expect = 0.23, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 36/105 (34%), Gaps = 22/105 (20%) Query: 4 VTVATWNV-------------NSIRARIH------NLAAWIKENNPDIICLQET-KTEDK 43 +++ ++NV N A + L + K + DI+CLQE + Sbjct: 76 ISIMSYNVLAQALIRRSLFPTNG--AALKWGTRSQVLLSEFKHYDCDILCLQELDYIQYN 133 Query: 44 NFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDL 88 +F + L L Y+ + + N + Q H + Sbjct: 134 SFWKQKLSKLGYNSQYYRSGTKNHGVAIFYKQEKFAFKHSMFINY 178 >gi|77555695|gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 1621 Score = 40.9 bits (94), Expect = 0.23, Method: Composition-based stats. Identities = 18/134 (13%), Positives = 41/134 (30%), Gaps = 9/134 (6%) Query: 134 FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW-----ENDACFTLEVRQSFQKLQN 188 L + P ++ + + + ++ Sbjct: 350 CLYGDAHSETKHRTWTTMRGLIDNPTTPWLMAGDFNEILFSHEKQGGRMKAQSAMDEFRH 409 Query: 189 MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGW 248 + ++ W ++ S R+D + +PE ++ +AR+ G Sbjct: 410 ALTDCGLDDLGFEGDAFT-WRNHSHSQEGYIRERLDRAVANPEWRAMFPAARVIN---GD 465 Query: 249 TKPSDHTPVIVSLD 262 + SDH PVI+ L+ Sbjct: 466 PRHSDHRPVIIELE 479 >gi|225711984|gb|ACO11838.1| TRAF and TNF receptor-associated protein [Lepeophtheirus salmonis] Length = 346 Score = 40.5 bits (93), Expect = 0.23, Method: Composition-based stats. Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 5/38 (13%) Query: 6 VATWNVNSI-RA----RIHNLAAWIKENNPDIICLQET 38 + TWNV+ + RA R+ + I++ I+ LQE Sbjct: 95 LVTWNVDGLSRANLKVRVKAVCKIIEDTKVGIVFLQEV 132 >gi|228961316|ref|ZP_04122933.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228798369|gb|EEM45365.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar pakistani str. T13001] Length = 352 Score = 40.5 bits (93), Expect = 0.23, Method: Composition-based stats. Identities = 44/267 (16%), Positives = 79/267 (29%), Gaps = 29/267 (10%) Query: 18 IHNLAAWIKENNPDIICLQET--KT------EDKNFPFETLQSL------NYHIETCGQK 63 + N+ A+++ N D LQE K+ + F + L NY + Sbjct: 93 LKNMLAFLQNENSDFALLQEVDIKSLRSFDINEHEFLKKGLPDYVSSFGKNYDTKWVPVP 152 Query: 64 SYNGVAI-------LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 N + SKY E R + I + + N Sbjct: 153 ITNPMGYAEAGLSTFSKYTVQEAKRFQLPGMEPWPKRLFDLDRAIVEYKIPVNNGKHVRL 212 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + + YD+ K+ + + + + GDY I+ + +D F Sbjct: 213 VNLHLSAYDEGGKIRKQQVEYLKEYMNKHYEN---GDYVIMGGDWNQLVSNAQLSDPKFV 269 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 E + +L + D + D +N ID ++SP + Sbjct: 270 KERPEWLVELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN----V 325 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263 + K + SDH PV + Sbjct: 326 EIVNVQGKDLKFEN-SDHNPVSAVFKL 351 >gi|148271891|ref|YP_001221452.1| hypothetical protein CMM_0712 [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147829821|emb|CAN00742.1| conserved hypothetical protein [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 276 Score = 40.5 bits (93), Expect = 0.23, Method: Composition-based stats. Identities = 34/246 (13%), Positives = 67/246 (27%), Gaps = 22/246 (8%) Query: 17 RIHNLAAWIKENNPDIICLQE-----TKTEDKNFPFETLQSLNYHIETCGQKSYNGVAIL 71 R L ++++ P ++ +QE +T +K P + + E + + Sbjct: 41 RQEVLTRFLQQERPTVLGVQEALWPQIQTIEKALPPS-YRMIGQGREGGSHGEHGAIFY- 98 Query: 72 SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWI 131 + + ++ H D T+ + + D + Sbjct: 99 -QASRLTLLEHDVMWLSDTPDVIGSMTWGNPMPRILTWARFQDEATGHPLVVLDTHLDHD 157 Query: 132 KRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191 R + E ++ + DA + Sbjct: 158 VAEARDRAAEAIAELVRTRFAGLPLVLIGDFNAPVDSFPYDALTRRAGLRDSWLDTARQA 217 Query: 192 TDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP 251 T A +F DY G RID I++S + +A ++ Sbjct: 218 TPAFG---------TFPDYRPPVVD---GPRIDWILVSDRVD--VRAAAVNDFAWRGRMM 263 Query: 252 SDHTPV 257 SDH PV Sbjct: 264 SDHLPV 269 >gi|190345986|gb|EDK37968.2| hypothetical protein PGUG_02066 [Meyerozyma guilliermondii ATCC 6260] Length = 444 Score = 40.5 bits (93), Expect = 0.23, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 31/76 (40%), Gaps = 22/76 (28%) Query: 4 VTVATWNV---------------NSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFP 46 + + ++N N+++ R L + +K + DI+CLQE ++ F Sbjct: 65 LKIMSYNTLAQSLVRRTLFPTSGNALKWATRSKVLTSELKYYDADIMCLQEV--DEVQFE 122 Query: 47 ---FETLQSLNYHIET 59 E L+ L Y + Sbjct: 123 SYWKEKLKELGYEYKF 138 >gi|146420885|ref|XP_001486395.1| hypothetical protein PGUG_02066 [Meyerozyma guilliermondii ATCC 6260] Length = 444 Score = 40.5 bits (93), Expect = 0.23, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 31/76 (40%), Gaps = 22/76 (28%) Query: 4 VTVATWNV---------------NSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFP 46 + + ++N N+++ R L + +K + DI+CLQE ++ F Sbjct: 65 LKIMSYNTLAQSLVRRTLFPTSGNALKWATRSKVLTSELKYYDADIMCLQEV--DEVQFE 122 Query: 47 ---FETLQSLNYHIET 59 E L+ L Y + Sbjct: 123 SYWKEKLKELGYEYKF 138 >gi|332022932|gb|EGI63200.1| hypothetical protein G5I_08437 [Acromyrmex echinatior] Length = 723 Score = 40.5 bits (93), Expect = 0.24, Method: Composition-based stats. Identities = 34/232 (14%), Positives = 62/232 (26%), Gaps = 43/232 (18%) Query: 31 DIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDV 90 DIICLQET + N +K+ ++ + + Sbjct: 225 DIICLQETLLKQDN-------KFGTSSHIQFRKN------IASKGDMNAHQNTFWYCNYT 271 Query: 91 QARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIF 150 I+ L I N P + + + S P+ Sbjct: 272 DKVGPILCNEIDRSNLIILNKDAPTLMQPPNLVLASPNLALIADPQTNSDSQGNHFPVCT 331 Query: 151 AGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDY 210 N+ P Y + E +S + N I+ Sbjct: 332 TIGGNVNAHPTFWYCDYTNKVGQIICSENDRSDLVILNKDAPTLIQPP------------ 379 Query: 211 YADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 D ++ SP + ++ D+ P + SDH PV ++++ Sbjct: 380 -------------DLVLASPNLAP-IADSQTDSNP----QASDHFPVCITIE 413 >gi|261329150|emb|CBH12129.1| RNA-editing complex protein MP100 [Trypanosoma brucei gambiense DAL972] Length = 894 Score = 40.5 bits (93), Expect = 0.24, Method: Composition-based stats. Identities = 32/288 (11%), Positives = 74/288 (25%), Gaps = 32/288 (11%) Query: 2 SVVTVATWNV-------------------NSIRARIHNLAAWIKENNPDIICLQETKTED 42 + + + TWNV S + R +A I+E + D++ +QE E Sbjct: 616 ASLKLLTWNVMFDRYSGKPTPLGMPGIDWCSPK-RYPVIAKIIEEEDADVVGMQEV--EP 672 Query: 43 KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN 102 + F + + L + + LP ++ Sbjct: 673 VFWEFLSKRPLIRQRYYFSCGHMSPAIAPWGVLMLIHRRRLPVQSINYLNVPAWTNHVSL 732 Query: 103 TQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD 162 + + ++ S + + GD + +D Sbjct: 733 MPVVGLKMVHGTVHIAAAHLLAPYTKSHENARTSQDTALRHHMTKTLGGGDVVTMGDFND 792 Query: 163 CYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR 222 ++ D F+ + +++ R Sbjct: 793 WPTNEFIMPHESQYVDCWPVLHPNDPGKTMDETNTFCKLKVEEMFFGRSDKVFLRSR--R 850 Query: 223 I----DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEP 266 + H++ + ++A + PSDH V ++ + P Sbjct: 851 LVPVEAHLVGTRSVNDENNNA----DAPAYLFPSDHYGVSITFSLKLP 894 >gi|213691505|ref|YP_002322091.1| Endonuclease/exonuclease/phosphatase [Bifidobacterium longum subsp. infantis ATCC 15697] gi|213522966|gb|ACJ51713.1| Endonuclease/exonuclease/phosphatase [Bifidobacterium longum subsp. infantis ATCC 15697] gi|320457581|dbj|BAJ68202.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis ATCC 15697] Length = 370 Score = 40.5 bits (93), Expect = 0.24, Method: Composition-based stats. Identities = 33/260 (12%), Positives = 67/260 (25%), Gaps = 47/260 (18%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTED--KNFPFETLQSLNYHIETCGQ 62 V T+NV +A + +++ +++ LQET TED K ++ + + Sbjct: 150 RVMTFNVYKGQADPQAIVELVRDQRVEVLALQET-TEDFVKKLNEAGIEHYLPYAQVSSS 208 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 G + S + + + + G Sbjct: 209 DGVFGNGLWSATPLADPADDDVNSSASFMPGGTVDMGGQQIRFISVHTTAPVPG------ 262 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 W + R + IF GD+N + + Sbjct: 263 ---YWRQWKRSLDELGLMRRHTDTRYIFMGDFNATYDHTPFRDFL--------------- 304 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYA--DSWSKNKGIRIDHIMLSPEATSLLHSAR 240 +S+ A ++ IDH++L + Sbjct: 305 ------GDRFVDAARESGHGFTFSWPTNRATVPMFAG-----IDHVVLDQGM--KAGQCK 351 Query: 241 IDTKPRGWTKPSDHTPVIVS 260 + SDH ++V+ Sbjct: 352 VVKVE-----GSDHAALLVT 366 >gi|115379792|ref|ZP_01466863.1| endonuclease/exonuclease/phosphatase [Stigmatella aurantiaca DW4/3-1] gi|310820726|ref|YP_003953084.1| endonuclease/exonuclease/phosphatase domain-containing protein [Stigmatella aurantiaca DW4/3-1] gi|115363210|gb|EAU62374.1| endonuclease/exonuclease/phosphatase [Stigmatella aurantiaca DW4/3-1] gi|309393798|gb|ADO71257.1| Endonuclease/exonuclease/phosphatase domain protein [Stigmatella aurantiaca DW4/3-1] Length = 254 Score = 40.5 bits (93), Expect = 0.24, Method: Composition-based stats. Identities = 14/66 (21%), Positives = 31/66 (46%), Gaps = 10/66 (15%) Query: 4 VTVATWNVN-SI----RARIHNLAAWIKENNPDIICLQETK-----TEDKNFPFETLQSL 53 +T+ ++N++ + R +H + ++E + D+I LQE T+ ++ P L Sbjct: 3 LTLVSYNIHSGVGTDGRFDLHRVGEVLRETHADVIALQEVGDFRSVTDREDQPEHLADML 62 Query: 54 NYHIET 59 H+ Sbjct: 63 GLHMAF 68 >gi|293373246|ref|ZP_06619606.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CMC 3f] gi|292631769|gb|EFF50387.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides ovatus SD CMC 3f] Length = 217 Score = 40.5 bits (93), Expect = 0.24, Method: Composition-based stats. Identities = 29/264 (10%), Positives = 55/264 (20%), Gaps = 58/264 (21%) Query: 2 SVVTVATWNVNS--IRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57 S + + TWN + I L + +++ +QE P +Y + Sbjct: 8 SHMRICTWNSQGNPLNDAIKLNILNHLLTIEQCNVVMIQE--CGKFILPAHFSGIYHYVV 65 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 + + ++ N TL + G+ Sbjct: 66 VEQAGAYNYRGNTCIIADLNFVASIHYLISGTGRSAICLNYNGYNIYTLHCESGSGAVGD 125 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + I + L E I P + Sbjct: 126 IRDLVHHAVSPFIIGGDMNSTPSEL-SENLRIMTTGVRSRPGNSAHFACCGMPTHI---- 180 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 G +D+ ++ L Sbjct: 181 -----------------------------------------SGRELDYFLIDSRL--QLR 197 Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261 + R K DH PVI+ + Sbjct: 198 TCV----RRYHMKGGDHYPVILEI 217 >gi|71904339|ref|YP_281142.1| exodeoxyribonuclease III [Streptococcus pyogenes MGAS6180] gi|71803434|gb|AAX72787.1| exodeoxyribonuclease III [Streptococcus pyogenes MGAS6180] Length = 279 Score = 40.5 bits (93), Expect = 0.24, Method: Composition-based stats. Identities = 35/274 (12%), Positives = 77/274 (28%), Gaps = 20/274 (7%) Query: 3 VVTVATWNVNSIRAR--IHNLAAW---IKENNPDIICLQETKTEDKNFPFETLQSLN-YH 56 + V T N +S + L A I DIICLQE ++ E L Y Sbjct: 8 MTKVLTLNTHSWMQANTLKKLVALAEHILAEKYDIICLQEI---NQLIESELATDLPRYQ 64 Query: 57 IETCGQKSYNGVAI---------LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107 + + ++ + G D+ + I + I+ + Sbjct: 65 ALSGTPNIHKDHFALLLIHYLQKRGQHYYWSWAYNHIGYDIYQEGVAILSKQPIHVSDIL 124 Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167 + + + K ++ + + + Sbjct: 125 VSAMADETDYHTRRSLIAKTTLDGKEVAVVNVHLSWFDKGFLGEWEKLEKELLTLNCPLL 184 Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227 + + T + + D+ + +S + +++DH+ Sbjct: 185 LMGDFNNPTDQDGYQVMMGSPLDLQDSHKVADHVFGDHSIVADIDGWQGNKEALKVDHVF 244 Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 S + + S++I + SDH + V+L Sbjct: 245 TSKDFI--IRSSKITFEGGDAPVVSDHYGLEVTL 276 >gi|190573815|ref|YP_001971660.1| hypothetical protein Smlt1836 [Stenotrophomonas maltophilia K279a] gi|190011737|emb|CAQ45357.1| conserved hypothetical protein [Stenotrophomonas maltophilia K279a] Length = 298 Score = 40.5 bits (93), Expect = 0.24, Method: Composition-based stats. Identities = 33/273 (12%), Positives = 75/273 (27%), Gaps = 32/273 (11%) Query: 4 VTVATWNVNSIRA------------RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51 + V ++NV R R + I + +P +I QE E ++ E L+ Sbjct: 44 LKVMSFNV---RTPADTEPGKRWPDRRDAMVKVILDAHPAVIGTQELVKEQADYLSEHLR 100 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 + E S + + + + L + N + Sbjct: 101 GYRWFGEGRRGGSGDEHMGVFYDSKVLAIEESGNFWLSDTPDVPGSITWGNLYPRMVTWA 160 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 + + R + ++ + +P + Sbjct: 161 LFRRLDDGRRFYF----MNTHLPYRDEDEPRRVKGAELIGKRVEALPADLPVVLTGDFN- 215 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 + +++ + + +F D+ + + +D +++ Sbjct: 216 ----SEPGGDTYKAFTRLLQDTRTQVKVPQGPRLTFHDFTGKATVQ-----LDWVLVRGF 266 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 S D + PSDH P++V LD P Sbjct: 267 ---HARSFLTDDRRIDGVLPSDHFPLVVELDWP 296 >gi|312130952|ref|YP_003998292.1| endonuclease/exonuclease/phosphatase [Leadbetterella byssophila DSM 17132] gi|311907498|gb|ADQ17939.1| Endonuclease/exonuclease/phosphatase [Leadbetterella byssophila DSM 17132] Length = 274 Score = 40.5 bits (93), Expect = 0.24, Method: Composition-based stats. Identities = 42/269 (15%), Positives = 67/269 (24%), Gaps = 28/269 (10%) Query: 4 VTVATWNV------NSIRA---RIHNLAAWIKENNPDIICLQETKTEDKNF--PFETLQS 52 + VA++N+ + A R + IK + DI QE F + Sbjct: 21 LIVASYNLRMDTPKDGPNAWPNRKEMVKELIKYHEFDIFGTQE------GFIHQLNDISE 74 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 L G +G D + N Sbjct: 75 LK-EYAFTGSGRDDGKQAGEHSAIFYRKKRFKLLDSGDFWLSEDPDKPGKGWDATCCNRI 133 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 G + F L+ + Q P+I D Sbjct: 134 ASWGKFKDLKTKKTFYFFNVHFDHQGIVARRESGQLMISKI-----QEIAGKFPVILTGD 188 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 E Q + + + + D+ KN RID+I +S Sbjct: 189 FNSLPETDQIKAISGLLKDAYTSSIAPPYGPVGTANSFKLDAPLKN---RIDYIFVSGTM 245 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +L A T + PSDH P+ + Sbjct: 246 -EVLKYAS-LTDHKDQRYPSDHLPIAAKI 272 >gi|255712199|ref|XP_002552382.1| KLTH0C03608p [Lachancea thermotolerans] gi|238933761|emb|CAR21944.1| KLTH0C03608p [Lachancea thermotolerans] Length = 495 Score = 40.5 bits (93), Expect = 0.24, Method: Composition-based stats. Identities = 30/208 (14%), Positives = 63/208 (30%), Gaps = 17/208 (8%) Query: 15 RARIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYHIETCGQKSYN-GVAILS 72 R+R+ L N D++CLQE + ++F E + L Y + + N G+AI+ Sbjct: 126 RSRV--LLNEFMHYNSDVLCLQEVDYIQYQSFWKEEFEKLGYESQFHRHGTKNHGIAIVW 183 Query: 73 KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI------------T 120 K +V + D + +E T L I + T Sbjct: 184 KRDMFTMVDKMLIDYDKEPSGALEPRTTTKNVGLAIALGFTKKVLAKYPGSSKRGIIVGT 243 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV- 179 + + +R + +++E + + + D Sbjct: 244 THLFWHPFGTFERTRQCYVMLNKMKEFMHRINVLQDKGATQENLWYPFFCGDFNSQPFDT 303 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSF 207 + + + + + Y+F Sbjct: 304 PYLSVSSKPVTYKGRAKTVIECSTSYTF 331 >gi|147902412|ref|NP_001089262.1| CCR4 carbon catabolite repression 4-like [Xenopus laevis] gi|58399136|gb|AAH89295.1| MGC85016 protein [Xenopus laevis] Length = 459 Score = 40.5 bits (93), Expect = 0.24, Method: Composition-based stats. Identities = 38/265 (14%), Positives = 74/265 (27%), Gaps = 22/265 (8%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFE--TLQSLNYHIET--CGQKSYNGVAILS 72 R + + I PD++CLQE D F L L Y V + Sbjct: 203 RKYLILEEILMYQPDVLCLQEV---DHYFDTFQPILSRLGYQCTFLAKPWSPCLDVEHNN 259 Query: 73 KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIK 132 + L ++ + T+ T + I ++ +K Sbjct: 260 GPDGCALFFLQDRFQLVNSSKIRLSARTLKTNQVAIAETLQCCETGRLLC---FAVTHLK 316 Query: 133 RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192 + RL L+ + + + + R + L Sbjct: 317 ARTGWERFRLAQGTDLLHNLESITQGATVPLIICGDFNAEPTEEVYKRFASSSLNLNSAY 376 Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA-------RIDTKP 245 + ++ Y+ W S + +D+I S A +++A +I Sbjct: 377 KLLSEDGESEPPYTTWKIRPTGESCHT---LDYIWYSQHAL-RVNNALGLPTEEQIGPNR 432 Query: 246 R-GWTKPSDHTPVIVSLDIPEPRKK 269 + PSDH ++ E + Sbjct: 433 LPSFNYPSDHLSLVCDFSFNEDPAR 457 >gi|330466241|ref|YP_004403984.1| endonuclease/exonuclease/phosphatase [Verrucosispora maris AB-18-032] gi|328809212|gb|AEB43384.1| endonuclease/exonuclease/phosphatase [Verrucosispora maris AB-18-032] Length = 650 Score = 40.5 bits (93), Expect = 0.25, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 7/46 (15%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268 IDHI +SP+ I + SDH PV V+L +P Sbjct: 611 IDHIFVSPDL-PTTDPVAI------ASTASDHLPVAVTLKLPPGTP 649 >gi|312382185|gb|EFR27728.1| hypothetical protein AND_05223 [Anopheles darlingi] Length = 518 Score = 40.5 bits (93), Expect = 0.25, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 22/46 (47%), Gaps = 8/46 (17%) Query: 1 MSV-VTVATWNVNSI------R-ARIHNLAAWIKENNPDIICLQET 38 M++ +++ T N+ I R R+ + + N DI+ LQE Sbjct: 1 MAMELSILTLNIWGIPYISKDREVRVKAIGDVLASGNYDIVSLQEV 46 >gi|262170443|ref|ZP_06038121.1| extracellular nuclease-related protein [Vibrio mimicus MB-451] gi|261891519|gb|EEY37505.1| extracellular nuclease-related protein [Vibrio mimicus MB-451] Length = 867 Score = 40.5 bits (93), Expect = 0.25, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 30/76 (39%), Gaps = 24/76 (31%) Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSA---RI-----------------DTKPRG 247 W Y S++ G +DH+++SP + + A I K + Sbjct: 773 WSY---SFNDEVGA-LDHLLVSPSLKTKVVDATDWHINGAESTLFDYNDEFKGNLPKYKD 828 Query: 248 WTKPSDHTPVIVSLDI 263 + SDH P ++ L+I Sbjct: 829 QFRASDHDPAVLELNI 844 >gi|258625717|ref|ZP_05720596.1| Nuclease-related protein [Vibrio mimicus VM603] gi|258581955|gb|EEW06825.1| Nuclease-related protein [Vibrio mimicus VM603] Length = 869 Score = 40.5 bits (93), Expect = 0.25, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 30/76 (39%), Gaps = 24/76 (31%) Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSA---RI-----------------DTKPRG 247 W Y S++ G +DH+++SP + + A I K + Sbjct: 775 WSY---SFNDEVGA-LDHLLVSPSLKTKVVDATDWHINGAESTLFDYNDEFKGNLPKYKD 830 Query: 248 WTKPSDHTPVIVSLDI 263 + SDH P ++ L+I Sbjct: 831 QFRASDHDPAVLELNI 846 >gi|147844133|emb|CAN80567.1| hypothetical protein VITISV_004504 [Vitis vinifera] Length = 1627 Score = 40.5 bits (93), Expect = 0.25, Method: Composition-based stats. Identities = 9/24 (37%), Positives = 13/24 (54%) Query: 18 IHNLAAWIKENNPDIICLQETKTE 41 + IK D++CLQETK + Sbjct: 775 RRLIKDVIKSQKADLVCLQETKIQ 798 >gi|147819043|emb|CAN71630.1| hypothetical protein VITISV_015580 [Vitis vinifera] Length = 1742 Score = 40.5 bits (93), Expect = 0.25, Method: Composition-based stats. Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 4/34 (11%) Query: 13 SIRA----RIHNLAAWIKENNPDIICLQETKTED 42 RA + + A IK+ D++CLQETK +D Sbjct: 451 GXRANNCDKRKVIKALIKKQKVDLVCLQETKIQD 484 >gi|153214876|ref|ZP_01949674.1| hypothetical protein A55_2851 [Vibrio cholerae 1587] gi|124115035|gb|EAY33855.1| hypothetical protein A55_2851 [Vibrio cholerae 1587] Length = 869 Score = 40.5 bits (93), Expect = 0.25, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 30/76 (39%), Gaps = 24/76 (31%) Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSA---RI-----------------DTKPRG 247 W Y S++ G +DH+++SP + + A I K + Sbjct: 775 WSY---SFNDEVGA-LDHLLVSPSLKTKVVDATDWHINGAESTLFDYNDEFKGNLPKYKD 830 Query: 248 WTKPSDHTPVIVSLDI 263 + SDH P ++ L+I Sbjct: 831 QFRASDHDPAVLELNI 846 >gi|116179146|ref|XP_001219422.1| predicted protein [Chaetomium globosum CBS 148.51] gi|88184498|gb|EAQ91966.1| predicted protein [Chaetomium globosum CBS 148.51] Length = 376 Score = 40.5 bits (93), Expect = 0.25, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 20/58 (34%), Gaps = 4/58 (6%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 ID ++ S E L RI SDH + + DI ++ + P Sbjct: 278 IDLVLASAELIEQLLKCRIHP----CDHGSDHRAIETTFDIAGEDRQTETRLLFKDAP 331 >gi|302868995|ref|YP_003837632.1| endonuclease/exonuclease/phosphatase [Micromonospora aurantiaca ATCC 27029] gi|315504534|ref|YP_004083421.1| endonuclease/exonuclease/phosphatase [Micromonospora sp. L5] gi|302571854|gb|ADL48056.1| Endonuclease/exonuclease/phosphatase [Micromonospora aurantiaca ATCC 27029] gi|315411153|gb|ADU09270.1| Endonuclease/exonuclease/phosphatase [Micromonospora sp. L5] Length = 232 Score = 40.5 bits (93), Expect = 0.25, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 3/44 (6%) Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 RID + + P T + + P + SDH PV+V L +P Sbjct: 190 RRIDALFVDPRIT--VVDYDVVDTP-AARRASDHFPVLVDLLLP 230 >gi|145553143|ref|XP_001462246.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124430085|emb|CAK94873.1| unnamed protein product [Paramecium tetraurelia] Length = 363 Score = 40.5 bits (93), Expect = 0.25, Method: Composition-based stats. Identities = 16/102 (15%), Positives = 37/102 (36%), Gaps = 1/102 (0%) Query: 15 RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKY 74 ++R + + IK+ PDI+CLQE ++ + +Q Y + N + + Sbjct: 24 KSRWPLIFSQIKKYKPDILCLQELDCDENDLSQLLIQD-QYEKLFLKRSQENQKDGCALF 82 Query: 75 QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 + + +L ++ + I + + G Sbjct: 83 YLKQKYKLIKSYNLHLKQEHLFCNSKTRMDKPNICLIAVLQG 124 >gi|117622972|ref|YP_851885.1| metal-dependent hydrolase [Escherichia coli APEC O1] gi|115512096|gb|ABJ00171.1| Metal-dependent hydrolase [Escherichia coli APEC O1] Length = 253 Score = 40.5 bits (93), Expect = 0.25, Method: Composition-based stats. Identities = 34/267 (12%), Positives = 64/267 (23%), Gaps = 32/267 (11%) Query: 5 TVATWNVN-SI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN--YH 56 V T N++ R + L ++ + DI+CLQE +++ H Sbjct: 11 KVLTINIHKGFTAFNRRFILPELRDAVRTVSTDIVCLQEV-MGAHEVHPLHVENWPDTSH 69 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 E ++ A E + +++ R Sbjct: 70 YEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVP 129 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + + R +Q L E + D + D + N Sbjct: 130 PMTGKAIHVMCVHLGLREAHRQAQLAMLAEWVNELPDGEPVLVAGDFNDWRQKANHPLKV 189 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 + +R+D I + + Sbjct: 190 QAGLDEIFTRAHGRPARTFPVQFPL-------------------LRLDRIYV----KNAS 226 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263 SA R W SDH P+ + + Sbjct: 227 ASAPTALPLRTWRHLSDHAPLSAEIHL 253 >gi|297622787|ref|YP_003704221.1| endonuclease/exonuclease/phosphatase [Truepera radiovictrix DSM 17093] gi|297163967|gb|ADI13678.1| Endonuclease/exonuclease/phosphatase [Truepera radiovictrix DSM 17093] Length = 865 Score = 40.5 bits (93), Expect = 0.25, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 25/73 (34%), Gaps = 23/73 (31%) Query: 223 IDHIMLSPEATSLLHSARIDT----KPRGWT------------------KPSDHTPVIVS 260 +D+ + SP + + I +PR + SDH PVI+ Sbjct: 711 LDYALASPSLAAQVTGVDIWHINPDEPRALEYDSAPRFGGEDRFTPTPYRSSDHDPVIIG 770 Query: 261 LDIP-EPRKKQQD 272 L + EP + Sbjct: 771 LSLTGEPAPEPTP 783 >gi|294931919|ref|XP_002780052.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] gi|239889896|gb|EER11847.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] Length = 286 Score = 40.5 bits (93), Expect = 0.25, Method: Composition-based stats. Identities = 25/170 (14%), Positives = 54/170 (31%), Gaps = 13/170 (7%) Query: 9 WNVNSIRARIHN----LAAWIKENNPDIICLQETKTEDK-------NFPFETLQSL--NY 55 WNV+S+RA +++ L KE P++I + D+ ++++ Sbjct: 86 WNVDSLRALLNHNVQELIDLCKEEQPNVIGFMNIRLSDEEMCEQCDQLLRAAVENILGPV 145 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + G + + + + A T T+ + + Y+P+ Sbjct: 146 ETVWNRCTAKKGYSGTAMIVRKSVGKFDSKLGISDHADPEGRTITLEFDDMVVVLCYVPN 205 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165 A ++P + GD N+ + D +N Sbjct: 206 SGHGLYRLAYRTSGRRCFDAELAEYCKSFDKPTLLLGDMNVADRDVDIWN 255 >gi|256090393|ref|XP_002581177.1| hypothetical protein [Schistosoma mansoni] gi|238667023|emb|CAZ37416.1| conserved hypothetical protein [Schistosoma mansoni] Length = 144 Score = 40.5 bits (93), Expect = 0.25, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 3/41 (7%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 IDHI +S T A RG SDH PV+ +++ Sbjct: 5 IDHICISKNFTRSTEDA---RTKRGADLASDHHPVMAKMEV 42 >gi|84501585|ref|ZP_00999757.1| endonuclease/exonuclease/phosphatase family protein [Oceanicola batsensis HTCC2597] gi|84390206|gb|EAQ02765.1| endonuclease/exonuclease/phosphatase family protein [Oceanicola batsensis HTCC2597] Length = 336 Score = 40.5 bits (93), Expect = 0.25, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 12/53 (22%) Query: 223 IDHIMLSPEATSLLHSARIDT---KPRGWTKP---------SDHTPVIVSLDI 263 +D+IM+SP+ S RI P W++P SDH PV++ +D+ Sbjct: 284 LDYIMISPDLMSHNPRWRIWHPFDDPGCWSRPQLRDALITASDHFPVVLDIDL 336 >gi|310794858|gb|EFQ30319.1| endonuclease/Exonuclease/phosphatase [Glomerella graminicola M1.001] Length = 603 Score = 40.5 bits (93), Expect = 0.25, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 25/68 (36%), Gaps = 11/68 (16%) Query: 200 DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL----LHSARIDTKPRGWTKPSDHT 255 Y++ Y ++ +DHI +SP + +++ SDH Sbjct: 542 PAEERYTY-AYDMNAQE------LDHIFVSPALAARNGTAYEHIHVNSWELYDELVSDHD 594 Query: 256 PVIVSLDI 263 P + L++ Sbjct: 595 PSVARLNV 602 >gi|330994578|ref|ZP_08318501.1| endonuclease/exonuclease/phosphatase [Gluconacetobacter sp. SXCC-1] gi|329758219|gb|EGG74740.1| endonuclease/exonuclease/phosphatase [Gluconacetobacter sp. SXCC-1] Length = 216 Score = 40.5 bits (93), Expect = 0.26, Method: Composition-based stats. Identities = 21/126 (16%), Positives = 46/126 (36%), Gaps = 11/126 (8%) Query: 4 VTVATWNVNSIR---ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 V V +WN+ +R A + ++ I PD++ +QE + + P ++ + Sbjct: 17 VKVVSWNL--LRRIGATVRDVIELIHAERPDLLLMQEATVDIDSLPTLVG---GHYARSP 71 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 +G+A S + L ++ + L + N++L HG + Sbjct: 72 LPGRIHGLACWSPHPY---RRPPLTCTLPAGTLIRRVAQVVDCRALVVANVHLSHGQLLN 128 Query: 121 STKYDD 126 + Sbjct: 129 RRQLRR 134 >gi|294566525|gb|ADF18553.1| endonuclease-reverse transcriptase [Bombyx mori] Length = 989 Score = 40.5 bits (93), Expect = 0.26, Method: Composition-based stats. Identities = 37/272 (13%), Positives = 71/272 (26%), Gaps = 36/272 (13%) Query: 4 VTVATWNVNSIRARIHNLAAWIKEN----NPDIICLQET--------KTEDKNFPFETLQ 51 + + T NV + I+ DI+ L E KT + N Sbjct: 58 LRIGTLNVRGM--LKPGKQEVIEREMLRCKIDILGLSEVHRRGSGHIKTANGNIL----- 110 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 + S NGVAI+ + V D + +++ Sbjct: 111 ----YFSGSENHSGNGVAIILPQKLESSVLGY-KTPSDRIIAVKLDARPVPINIVQVYAP 165 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 I+ Y + ++ + + + N + Sbjct: 166 TSQSEEIISDQFYFELDDLLRTIPSKEVTVVYGDWNAKVGTTRGDVLLGATVGNFGL--G 223 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 E F + + H LY++ +N+ ID+I + Sbjct: 224 VRNDRGEKFLQFCVENQLVIMNTWFEHHPR-RLYTWISPSGH---RNQ---IDYITIKSR 276 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 S + + + G SDH V+ + Sbjct: 277 WRSSVLNTKTLP---GADCGSDHQLVVADFRL 305 >gi|125624386|ref|YP_001032869.1| endonuclease/exonuclease/phosphatase family protein [Lactococcus lactis subsp. cremoris MG1363] gi|124493194|emb|CAL98159.1| endonuclease/exonuclease/phosphatase family protein [Lactococcus lactis subsp. cremoris MG1363] gi|300071173|gb|ADJ60573.1| endonuclease/exonuclease/phosphatase family protein [Lactococcus lactis subsp. cremoris NZ9000] Length = 352 Score = 40.5 bits (93), Expect = 0.26, Method: Composition-based stats. Identities = 35/269 (13%), Positives = 70/269 (26%), Gaps = 30/269 (11%) Query: 14 IRARIHNLAAWIKENNPDIICLQET--------KTEDKNFPFETLQSL------NYHIET 59 +++ I IK+ NPD +QE + + L NY Sbjct: 93 VKSAIQEDIRLIKKENPDFGNIQEIDWQGDRSQQVNEPQLVRAGLPDYSSVLTQNYDSAY 152 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-TQTLRIGNLYLPHGNP 118 + + + + + L + + + Sbjct: 153 LFYPVTKPIGKAKSGIMTYSKYEIENSTRYKLPIETNFNKFFDLDRAFSVSLLPIKNSDK 212 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 ++I Q L L + + + + A Sbjct: 213 KFVIFNTHLSAFITDQKIQKQQLLTLFDAMK----KYVNKGDYVICGADYNHALAGKAHP 268 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSF----WDYYADSWSKNKGIRIDHIMLSPEATS 234 ++ T +R T+ + + Y+ + GI ID ++S Sbjct: 269 ELTWMKEFPTENLTKGMRVVAPTNAP-TVRSLDFAYHQKNPKNTFGI-IDGFIVSNNIKD 326 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 L ID + K SDH PV++ + Sbjct: 327 -LKIQTIDNQ----FKSSDHQPVLMDFSL 350 >gi|116179358|ref|XP_001219528.1| hypothetical protein CHGG_00307 [Chaetomium globosum CBS 148.51] gi|88184604|gb|EAQ92072.1| hypothetical protein CHGG_00307 [Chaetomium globosum CBS 148.51] Length = 1821 Score = 40.5 bits (93), Expect = 0.26, Method: Composition-based stats. Identities = 32/280 (11%), Positives = 76/280 (27%), Gaps = 41/280 (14%) Query: 1 MS-VVTVATWNVNSIRARIHNL--AAWIKE---NNPDIICLQETKTEDKNFPFETLQ-SL 53 MS + + NV R + + + + N ++ +QE + Sbjct: 369 MSRTLRLIQLNV-----RKQGVVHESLMNDKDIQNATVLAIQEPHARR--IHGRLFTTPM 421 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDD-LDVQARFIEATFTINTQTLRIGNLY 112 +H S + + + + + A + + + + ++Y Sbjct: 422 GHHKWIKMVPSTWREGRWAVRSMLWVNKDVEAEQVPIGSPDMTAAILRLPGRRVLVVSVY 481 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 +P + + + + A + ++ AGD+N + + E Sbjct: 482 VPK---QDPQALRETCDNLHKTIMGARRDAGTTVDVVIAGDFN-RHDQLWGGDDVSVEIK 537 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 + + + H + ID ++ S E Sbjct: 538 GEADSIIDLMNEFALRSLLRRGTKTWHLGDSNTT----------------IDLVLASAEL 581 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLD--IPEPRKKQ 270 I G SDH + D +P P+++ Sbjct: 582 AETTVKCAIHRTKHG----SDHRAIETVFDTLVPVPKERD 617 >gi|316973068|gb|EFV56700.1| sphingomyelin phosphodiesterase 2 [Trichinella spiralis] Length = 280 Score = 40.5 bits (93), Expect = 0.26, Method: Composition-based stats. Identities = 37/227 (16%), Positives = 62/227 (27%), Gaps = 24/227 (10%) Query: 4 VTVATWNVNSI-----------RARIHNLAAWIKENNPDIICLQETKTEDK--NFPFETL 50 + V T N I + RI +A + DI+ LQE +E+ Sbjct: 7 LRVLTLNCWGIPLPFPFGSADRKVRIKEIAKELATGKYDIVSLQEIWSENDFNMIHDAVR 66 Query: 51 QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL---- 106 + Y + +GV + SK +E + H + V F L Sbjct: 67 LVMPYSFYFHNGYAGSGVCVFSKGIILETLMHRYSLNGYVHHIHRGDWFGGKMVGLCRIQ 126 Query: 107 -------RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159 N ++ +F ++ E I GD N+ P Sbjct: 127 FSGININVYATHIHAEYNHDEDVYLAHRVVQAFELGQFMRNTMQNCEMAILMGDLNLRPT 186 Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYS 206 + LE L + D+ R H ++ Sbjct: 187 DLGYDLIRHSASLKDAWLERSDDVILLACIVHMDSGRGIALAGHHFT 233 >gi|147767145|emb|CAN75646.1| hypothetical protein VITISV_031269 [Vitis vinifera] Length = 1701 Score = 40.5 bits (93), Expect = 0.26, Method: Composition-based stats. Identities = 16/133 (12%), Positives = 38/133 (28%), Gaps = 9/133 (6%) Query: 130 WIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR--QSFQKLQ 187 + + Y + +W + C + + + + Sbjct: 593 CRFKNCEDGFNWIFSGVYGPTVKRYRELFWEELGAIRGLWSDPWCIGGDFNLIRFPNESR 652 Query: 188 NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRG 247 G + +++ + + R+D ++S + S A T PR Sbjct: 653 RGGRLSSSMRRFSEGGPFTW----SGGLNNQAMTRLDRFLVSEDWESHFKGAVQCTLPR- 707 Query: 248 WTKPSDHTPVIVS 260 SDH P+++ Sbjct: 708 --PVSDHFPILLD 718 >gi|116206820|ref|XP_001229219.1| hypothetical protein CHGG_02703 [Chaetomium globosum CBS 148.51] gi|88183300|gb|EAQ90768.1| hypothetical protein CHGG_02703 [Chaetomium globosum CBS 148.51] Length = 690 Score = 40.5 bits (93), Expect = 0.26, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 22/59 (37%), Gaps = 7/59 (11%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 IDH S + + RG SDH P I+ DI P +Q N K + Sbjct: 504 IDHFWASVGL----QTTYYGLEYRGK---SDHYPQILEADIGGPLPQQTQPGGWNWKMM 555 >gi|302410141|ref|XP_003002904.1| endonuclease/exonuclease/phosphatase family [Verticillium albo-atrum VaMs.102] gi|261357928|gb|EEY20356.1| endonuclease/exonuclease/phosphatase family [Verticillium albo-atrum VaMs.102] Length = 509 Score = 40.5 bits (93), Expect = 0.26, Method: Composition-based stats. Identities = 39/305 (12%), Positives = 82/305 (26%), Gaps = 62/305 (20%) Query: 2 SVVTVATWN-------VNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 + V T+N V+ + ++ E+N DI+ LQE + +L Sbjct: 226 KTLRVLTFNMWHGGTQVD--NYHEKQV-RFLLESNVDIVGLQE--DQSGRHAHRLAHALG 280 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 +H + + + PI V+ IN + +G Sbjct: 281 WHY-----WASSRSVGVISRYPIAKKYGEINASGGVRIALDGDEQQINFWVVHLGYTPYG 335 Query: 115 HGNPITSTKYDDKISWIK-------------RFLRFASQRLELEEPLIFAGDYNIIPQPH 161 + + + + + E L+ Sbjct: 336 PYDFCFDGMDVETVIERETKSGRTPQITDTLAAMEGQIASAEDVPVLLVGDFNAPSHLDW 395 Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY---SF---WDYYADSW 215 A + K + G D+ R + ++ + ++ + Sbjct: 396 TEALRKKNCGYANV---PWPTSVKTTDAGLVDSFRVANPDPVKVPGITWSPLFPFHDGA- 451 Query: 216 SKNKGI-----RIDHIMLSPEATSLLHSARIDTKPRGWTKPS----------DHTPVIVS 260 G RID I + T + +++ G KPS DH ++ + Sbjct: 452 ---TGRPEPQDRIDFIYHAGNLT--VKNSK--DVVVGQPKPSPNHKQNEWTTDHATILTT 504 Query: 261 LDIPE 265 ++P Sbjct: 505 YELPA 509 >gi|89074806|ref|ZP_01161260.1| putative exported phosphatase [Photobacterium sp. SKA34] gi|89049381|gb|EAR54943.1| putative exported phosphatase [Photobacterium sp. SKA34] Length = 436 Score = 40.5 bits (93), Expect = 0.26, Method: Composition-based stats. Identities = 47/318 (14%), Positives = 90/318 (28%), Gaps = 58/318 (18%) Query: 7 ATWNVN-----S---IRARIHNLAAWIKENNPDII----------CLQETKTEDKNFPFE 48 +WN+ ++ I + I NPD+ +QE + + P E Sbjct: 122 LSWNLWTGPGEGTPELKDHIKRVVEDIAAINPDVFLSIETYGKGAAIQEAMAKANHVPVE 181 Query: 49 TLQSLNYHIETCGQKSYNG------------VAILSKYQPIEIVTHLPGDDLDVQARFIE 96 + +Y+ TC + V + I + +V I Sbjct: 182 DI---HYYTITCNNPADQSSCQRGKGIDNLAVFSKYEIIDSFIYNGKTVGNFNVGGVKIN 238 Query: 97 ATFTINT--QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPL------ 148 Q + + + +L + + I D ++ S E Sbjct: 239 VENKKTGIKQPVWVIDTWLHYKDDIEKPLDDYYLAKRDGTPLPESPVKTDENYRLPQAKE 298 Query: 149 ------IFAGDYNIIPQ----PHDCYNPIIWENDACFTLEVRQSFQK----LQNMGFTDA 194 + + P H+ + + + K + GF D+ Sbjct: 299 IIEVIEPLLSNADDTPIILGGDHNTVSHLDFAKKWKKAHYGVVLPFKVSKVFTDAGFKDS 358 Query: 195 IRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP--S 252 R H LY + + + + RID+I A + + PR S Sbjct: 359 YREIHPNPILYPGSSWSPMNRTSDAPQRIDYIYY-KGAKLQATDSVMVDSPRAGFSHLTS 417 Query: 253 DHTPVIVSLDIPEPRKKQ 270 DH ++ S ++ KK Sbjct: 418 DHGAMLTSFNLSAFPKKD 435 >gi|289432089|ref|YP_003461962.1| endonuclease/exonuclease/phosphatase [Dehalococcoides sp. GT] gi|288945809|gb|ADC73506.1| Endonuclease/exonuclease/phosphatase [Dehalococcoides sp. GT] Length = 639 Score = 40.5 bits (93), Expect = 0.27, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 21/40 (52%), Gaps = 5/40 (12%) Query: 4 VTVATWNV-NSIRAR----IHNLAAWIKENNPDIICLQET 38 + + T+N+ N + + LA I+++ D++ LQE Sbjct: 412 LRIMTYNLHNGFNTQGKLDMEALARVIEDSGADVVALQEI 451 Score = 40.2 bits (92), Expect = 0.34, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 7/43 (16%) Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 RID+I SPE + S I + SDH +I + + Sbjct: 604 RIDYIWASPEI-EYIDSYTIVS------LASDHLAIIADIRLS 639 >gi|147807723|emb|CAN77758.1| hypothetical protein VITISV_035945 [Vitis vinifera] Length = 1859 Score = 40.5 bits (93), Expect = 0.27, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 8/41 (19%) Query: 4 VTVATWNVNSIRAR-----IHNLAAWIKENNPDIICLQETK 39 + + +WNV R + A I+ D+ C+QETK Sbjct: 3 LRLLSWNV---RXANDSSKRKVIKAMIRSQRVDLFCIQETK 40 >gi|147668908|ref|YP_001213726.1| endonuclease/exonuclease/phosphatase [Dehalococcoides sp. BAV1] gi|146269856|gb|ABQ16848.1| Endonuclease/exonuclease/phosphatase [Dehalococcoides sp. BAV1] Length = 639 Score = 40.5 bits (93), Expect = 0.27, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 21/40 (52%), Gaps = 5/40 (12%) Query: 4 VTVATWNV-NSIRAR----IHNLAAWIKENNPDIICLQET 38 + + T+N+ N + + LA I+++ D++ LQE Sbjct: 412 LRIMTYNLHNGFNTQGKLDMEALARVIEDSGADVVALQEI 451 Score = 40.2 bits (92), Expect = 0.34, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 7/43 (16%) Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 RID+I SPE + S I + SDH +I + + Sbjct: 604 RIDYIWASPEI-EYIDSYTIVS------LASDHLAIIADIRLS 639 >gi|89074584|ref|ZP_01161056.1| hypothetical protein SKA34_11975 [Photobacterium sp. SKA34] gi|89049688|gb|EAR55247.1| hypothetical protein SKA34_11975 [Photobacterium sp. SKA34] Length = 379 Score = 40.5 bits (93), Expect = 0.27, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 17/70 (24%) Query: 211 YADSWSKNKGIRIDHIMLSPEATSLLHSARI---DT---------KPRGWTKP---SDHT 255 + W+ G+R+D+++ S + + D +G KP SDH Sbjct: 312 RKNEWTHLAGLRLDYVLPSENLE--VIKTGVFWPDKSDALRELILDCKGREKPVAGSDHR 369 Query: 256 PVIVSLDIPE 265 V V ++I + Sbjct: 370 MVWVDINIAD 379 >gi|295115708|emb|CBL36555.1| Metal-dependent hydrolase [butyrate-producing bacterium SM4/1] Length = 324 Score = 40.5 bits (93), Expect = 0.27, Method: Composition-based stats. Identities = 38/300 (12%), Positives = 70/300 (23%), Gaps = 53/300 (17%) Query: 4 VTVATWNVNSIR-----ARIHNLAAWIKENNPDIICLQETK--TEDKNFPFETLQSLNYH 56 + + T N +S+ ++ I + PD+I LQE + + E L+ + Sbjct: 1 MKLLTLNTHSLEEKDYEKKLKIFTEEILKEKPDVIALQEVNQPLDGEEADGEVLKKSGFI 60 Query: 57 IETCGQKSYN---------------------GVAILSKYQPIEIVTHLPGDDLDVQARFI 95 S V + + G L + Sbjct: 61 PCPSEPPSCAVPVRLGNHGLRAAQLLRRSGFLVFWTWTSAKVGYGKYDEGMALMSRRPIA 120 Query: 96 EATFTINTQTLRIGNL----------YLPHGNPITSTKYDDKISWIKRFLRFASQRLELE 145 E + T N + G S W F+ Q L+ Sbjct: 121 EVSQLFLTDGRDYNNWKTRKALAITLNIGKGEEPVSFVTAHMGWWKDEEEPFSRQWERLD 180 Query: 146 EPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY 205 + D + + + G D + Sbjct: 181 AFASSLRRRADVWLMGDFNTQDSVRGEGYDRITASGWKDAYRAAGKRDGGITIPGAIDGW 240 Query: 206 SFWDYYADSWSKNK--GIRIDHIMLSP--EATSLLHSARID-TKPRGWTKPSDHTPVIVS 260 + G+RID+I ++ + + R SD PV+ Sbjct: 241 ---------REDGEVPGMRIDYIWYGRKHDSGDRKSRGDVLIEEVRTVFNGSD-CPVVSD 290 >gi|242039679|ref|XP_002467234.1| hypothetical protein SORBIDRAFT_01g021750 [Sorghum bicolor] gi|241921088|gb|EER94232.1| hypothetical protein SORBIDRAFT_01g021750 [Sorghum bicolor] Length = 426 Score = 40.5 bits (93), Expect = 0.27, Method: Composition-based stats. Identities = 25/264 (9%), Positives = 79/264 (29%), Gaps = 32/264 (12%) Query: 4 VTVATWNVNS----IRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 +T+ +WN +R+ ++++LA + + + ET+ Sbjct: 1 MTLLSWNCRGSGGSLRSSKMNHLARLLTSTKSQVCFISETR------------------- 41 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + + ++++++ ++ + F++ ++ N Sbjct: 42 ---NSTISRTSLINRFNALDAFIIPAQGQSGGLWLIWKQDFSLTIVDQSPNYIFALCNNN 98 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + + ++ + + + A + D N + + + Sbjct: 99 LDNRQFGLICLYGDPHHHNTTSIWMQVHDFVVANTNMPMFCMGDLNNIMHPDEKSGPGRP 158 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 + + + Y++ + + + R+D + + E + Sbjct: 159 DLRRINSFCDSVKECGFIDLGYSGPAYTWTNKRFSTTPTFE--RLDRCLANAEWCMMYPR 216 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 + P SDHTP++ LD Sbjct: 217 TTVYHLPMLR---SDHTPILALLD 237 >gi|325916353|ref|ZP_08178628.1| metal-dependent hydrolase [Xanthomonas vesicatoria ATCC 35937] gi|325537401|gb|EGD09122.1| metal-dependent hydrolase [Xanthomonas vesicatoria ATCC 35937] Length = 255 Score = 40.5 bits (93), Expect = 0.27, Method: Composition-based stats. Identities = 15/95 (15%), Positives = 30/95 (31%), Gaps = 14/95 (14%) Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 +A + + + R + +++F + D IDHI++S Sbjct: 170 HPNAMLMGDFNCVADRPEMQALYRHTRLQPPSGVVHTFPSWRPD-------RAIDHILVS 222 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 I+ SDH V + + +P Sbjct: 223 DSLV-------IEHTEAIPAAFSDHLAVGMDIRVP 250 >gi|324520567|gb|ADY47668.1| Craniofacial development protein 2 [Ascaris suum] Length = 328 Score = 40.5 bits (93), Expect = 0.27, Method: Composition-based stats. Identities = 15/114 (13%), Positives = 40/114 (35%), Gaps = 14/114 (12%) Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL-YSFWDYYADSWSKNKGIRIDHIM 227 +Q +N H +++ D+ KN+ ID+I+ Sbjct: 81 NFGLGTRNPRGQQLVDFCENNRMKITNTFFKKRHGKKWTWRSPSGDA--KNE---IDYIL 135 Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPR---KKQQDSTSQNM 278 ++ + + + SDH V L + + R +++++ +++ + Sbjct: 136 VNKAII--VKDTEVLNH---FQTGSDHRLVRTKLRLNDKRLWARRKRNKSTEKL 184 >gi|257068362|ref|YP_003154617.1| metal-dependent hydrolase [Brachybacterium faecium DSM 4810] gi|256559180|gb|ACU85027.1| metal-dependent hydrolase [Brachybacterium faecium DSM 4810] Length = 244 Score = 40.5 bits (93), Expect = 0.27, Method: Composition-based stats. Identities = 10/34 (29%), Positives = 20/34 (58%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQE 37 + + TWN+ +R I L +++ PD++ +QE Sbjct: 8 LRILTWNLWELRGDIAALIEAVEDLQPDVLLVQE 41 >gi|149377356|ref|ZP_01895101.1| extracellular nuclease, putative [Marinobacter algicola DG893] gi|149358368|gb|EDM46845.1| extracellular nuclease, putative [Marinobacter algicola DG893] Length = 588 Score = 40.5 bits (93), Expect = 0.27, Method: Composition-based stats. Identities = 35/265 (13%), Positives = 63/265 (23%), Gaps = 38/265 (14%) Query: 29 NPDIICLQETKTEDKNFP-----FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHL 83 +PDI+ + E E+ + E ++L H + G + + Sbjct: 332 DPDILAVTE--MENDGYEGDSAIAELARALGPHWRYVDTNNNTGSDAIRTDLLYRSDRVV 389 Query: 84 PGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISW--------IKRFL 135 + I K Sbjct: 390 AEGSASRLTTTPFDRRGRPPVAQIFRPINSDRALRIVVPHLKSKACRGAKGPNRDQDDGQ 449 Query: 136 RFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAI 195 S R E I + + I + +A Q + + Sbjct: 450 GCYSHRREQATRAIIRWTHALPHPNGLAGTMITGDMNAYAREAPLQLLEAAGFINTVHHF 509 Query: 196 RATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA---RIDTKP---RGWT 249 DT ++ Y S +D+ ++S + A I++ G+ Sbjct: 510 HGCTDTSCKHT--SYRYHGRSGT----LDYSLVSNGLLPQIVGAHTWSINSDEPRALGYK 563 Query: 250 KP-----------SDHTPVIVSLDI 263 P SDH PVI L + Sbjct: 564 GPVTLPTGQPWRSSDHNPVITDLSL 588 >gi|156095775|ref|XP_001613922.1| sphingomyelin phosphodiesterase [Plasmodium vivax SaI-1] gi|148802796|gb|EDL44195.1| sphingomyelin phosphodiesterase, putative [Plasmodium vivax] Length = 753 Score = 40.5 bits (93), Expect = 0.27, Method: Composition-based stats. Identities = 35/227 (15%), Positives = 72/227 (31%), Gaps = 37/227 (16%) Query: 73 KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN---PITSTKYDDKIS 129 ++ I ++ D+ I +N + + + +L G+ Sbjct: 520 MHKHALIYSNCKFPDMFCTKGAIYLKCCVNNKPVNVIATHLQAGDTSDQQNCRWKQLNEL 579 Query: 130 WIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNM 189 + S ++ EPL F GD+NI + + + + +++ + + Sbjct: 580 SNWVYNGAPSFHIKKNEPLFFVGDFNIRYHLDKSFFDRVLSSGCLNSSVTKKALETTYDS 639 Query: 190 GFTDAIRATHDTHHLYSF-WDYYADSWSKNKGIRIDHIMLSPE--ATSLLHSARIDTKPR 246 D YSF ++Y +D+I+++ + +L+ I R Sbjct: 640 YLNDYCMHM---ERDYSFKYNYT-----------LDYILVNNDSDVKTLVPQTAIQKDYR 685 Query: 247 -----------------GWTKPSDHTPVIVSLDIPEPRKKQQDSTSQ 276 PSDH P+ + IP R + Q S Sbjct: 686 PIQIIKSLLGFIPYKCTYIHHPSDHFPIYATFKIPNQRGELQGRASP 732 >gi|118102266|ref|XP_001232552.1| PREDICTED: hypothetical protein isoform 2 [Gallus gallus] Length = 298 Score = 40.5 bits (93), Expect = 0.27, Method: Composition-based stats. Identities = 33/261 (12%), Positives = 68/261 (26%), Gaps = 30/261 (11%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDK--NFPFETLQSLNYHIETCGQKSYNGVAILSKY 74 RI + + + D++ LQE +E + + + +G+ + SK+ Sbjct: 29 RIRLIGDRLCQEGFDLVLLQEIWSERDYSDLKAKLGGCCPFSHYFRSGVIGSGLCVFSKF 88 Query: 75 QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI-----------GNLYLPHGNPITSTK 123 ++ + + + F + L + + Sbjct: 89 PILDTLLYQYSLNGYPYMLQHGDWFCGKSVGLVVVRIAEITFNIYVTHLHAEYSREKDAY 148 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 ++ +F + + ++ GD N+ P W E + Sbjct: 149 LPHRVVQAWELAQFICHTAKAADVVLLGGDLNMHPGDVGVRLLRGWTGLHDAFTEAKHFE 208 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 T + GIRID+I+ +S Sbjct: 209 GCEDGCTLIPNNCFTVKSELQ-----------PFPLGIRIDYILY-KAVSSFTVKCEELR 256 Query: 244 ----KPRGWTKP-SDHTPVIV 259 G P SDH V+ Sbjct: 257 TTTGTVPGMDIPYSDHEAVMA 277 >gi|327182593|gb|AEA31040.1| hypothetical protein LAB52_00220 [Lactobacillus amylovorus GRL 1118] Length = 367 Score = 40.5 bits (93), Expect = 0.28, Method: Composition-based stats. Identities = 37/273 (13%), Positives = 70/273 (25%), Gaps = 29/273 (10%) Query: 13 SIRARIHNLAAWIKENNPDIICLQETKTEDK--------NFPFETLQSL------NYHIE 58 S+ A + +K+ NPD + QE T N ++ N+H Sbjct: 101 SVLASTDGVIKTMKKQNPDFMLFQEIDTHSTRSHYVNQVNLVEHAFKNYDHVFANNFHSA 160 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPG--DDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 Y+ + H+ + + FT + + + + G Sbjct: 161 YLDWPLYDPHGSVQSGLLSMSKYHMQSAVRRKYPVSSAFISKFTDLDRCFTVMHYPIKGG 220 Query: 117 NP---ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 I S R + +E AG+Y I+ + Sbjct: 221 KELIVINSHMSAYDKGGKMRKAQMKILSKVIEAEYK-AGNYVIVGGDFNHALGRDMLTHF 279 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSP 230 ++ L + + + K N D ++S Sbjct: 280 DHQEKIPSWVSVLDQKMLPKDFIMVKATNRERVATVRSTDMKYRPKVNYQTVGDGFIISK 339 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + I+T R DH PV + + Sbjct: 340 NIKAKATD--INTDYRYA----DHNPVRLGFSL 366 >gi|226310908|ref|YP_002770802.1| hypothetical protein BBR47_13210 [Brevibacillus brevis NBRC 100599] gi|226093856|dbj|BAH42298.1| hypothetical protein [Brevibacillus brevis NBRC 100599] Length = 1829 Score = 40.5 bits (93), Expect = 0.28, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 30/77 (38%), Gaps = 10/77 (12%) Query: 200 DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS--LLHSARIDTKPRGWT-KPSDHTP 256 Y++ Y +S +D I++S + I+ + SDH P Sbjct: 1210 PKGEQYTYV-YQGNSQV------LDQILVSNHLEDDTKVDIVHINAGLTENEGRVSDHNP 1262 Query: 257 VIVSLDIPEPRKKQQDS 273 V+V LD+ + ++ + Sbjct: 1263 VLVQLDLKDRGTPEKTA 1279 >gi|110639788|ref|YP_679998.1| endonuclease/exonuclease/phosphatase family protein [Cytophaga hutchinsonii ATCC 33406] gi|110282469|gb|ABG60655.1| endonuclease/exonuclease/phosphatase family protein [Cytophaga hutchinsonii ATCC 33406] Length = 339 Score = 40.5 bits (93), Expect = 0.28, Method: Composition-based stats. Identities = 33/260 (12%), Positives = 72/260 (27%), Gaps = 51/260 (19%) Query: 19 HNLAAWIKENNPDIICLQETKTEDKNFPFETLQ------SLNYHIETCGQKSYNGVAILS 72 + +IK++ D++CLQE + K+ F T+ Y ET ++ ++ Sbjct: 103 RKIIDFIKKSEADVLCLQEFYNDPKDTLFNTIHRIRKKYKYYYFSETYKNRAGASFGMII 162 Query: 73 KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIK 132 + + I A + +T+RI N++L + + Sbjct: 163 FSKYPIKNRGKVVFHERSNNQTIYADVLLPNKTVRIYNMHLQSMSINDKEIAESNFDTKS 222 Query: 133 RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192 + + + + + Sbjct: 223 KTNVLNAFTKFKKGTIN------------------------RSIQVDTLVGHIKASPYKV 258 Query: 193 DAIRATHDTHHLYSF---WDYYADSW-SKNKG-----------IRIDHIMLSPEATSLLH 237 +D + Y++ D +++ K G +RID + Sbjct: 259 IVCGDLNDPPYSYTYETLSDQLNNAFEEKGNGLGITFNGRLPFLRIDQQFCDQDIE---- 314 Query: 238 SARIDTKPRGWTKPSDHTPV 257 I + + +DH PV Sbjct: 315 --VIRFETQHNITYTDHFPV 332 >gi|325963443|ref|YP_004241349.1| endonuclease/exonuclease/phosphatase family protein [Arthrobacter phenanthrenivorans Sphe3] gi|323469530|gb|ADX73215.1| endonuclease/exonuclease/phosphatase family protein [Arthrobacter phenanthrenivorans Sphe3] Length = 225 Score = 40.5 bits (93), Expect = 0.28, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 9/43 (20%) Query: 4 VTVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTED 42 + V ++N R H L A + ++ D +CLQE D Sbjct: 1 MRVISYN-----LRKHKASGELLALARNHDIDALCLQEVDASD 38 >gi|302540364|ref|ZP_07292706.1| PE-PGRS family protein [Streptomyces hygroscopicus ATCC 53653] gi|302457982|gb|EFL21075.1| PE-PGRS family protein [Streptomyces himastatinicus ATCC 53653] Length = 290 Score = 40.5 bits (93), Expect = 0.28, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 5/46 (10%) Query: 221 IRIDHIMLSPEATSLLHSARIDTKPR-----GWTKPSDHTPVIVSL 261 RID +LSP T L S + PR G SDH P+ + L Sbjct: 242 RRIDVFLLSPALTGALASYQAVDDPRLLPHDGRPGASDHRPITLRL 287 >gi|300772811|ref|ZP_07082681.1| possible secreted protein [Sphingobacterium spiritivorum ATCC 33861] gi|300761114|gb|EFK57940.1| possible secreted protein [Sphingobacterium spiritivorum ATCC 33861] Length = 269 Score = 40.5 bits (93), Expect = 0.29, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 15/70 (21%) Query: 2 SVVTVATWNV------NSIRARIHNLAAWIKENNPDIICLQET--------KTEDKNFPF 47 S +TV T+N+ NS + N+A IK+ NPD++ LQE K + Sbjct: 35 SKLTVITYNIHHGAPENSEVVNLENIANTIKQKNPDLVALQEVDVNVPRSGKVDQAKKLA 94 Query: 48 ETLQSLNYHI 57 E L ++NY+ Sbjct: 95 ELL-NMNYYF 103 >gi|227538193|ref|ZP_03968242.1| endonuclease/exonuclease/phosphatase [Sphingobacterium spiritivorum ATCC 33300] gi|227241962|gb|EEI91977.1| endonuclease/exonuclease/phosphatase [Sphingobacterium spiritivorum ATCC 33300] Length = 269 Score = 40.5 bits (93), Expect = 0.29, Method: Composition-based stats. Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 15/70 (21%) Query: 2 SVVTVATWNV------NSIRARIHNLAAWIKENNPDIICLQET--------KTEDKNFPF 47 S +TV T+N+ NS + N+A IK+ NPD++ LQE K + Sbjct: 35 SKLTVITYNIHHGAPENSEVVNLENIANTIKQKNPDLVALQEVDVNVPRSGKVDQAKKLA 94 Query: 48 ETLQSLNYHI 57 E L ++NY+ Sbjct: 95 ELL-NMNYYF 103 >gi|167756050|ref|ZP_02428177.1| hypothetical protein CLORAM_01570 [Clostridium ramosum DSM 1402] gi|237734036|ref|ZP_04564517.1| glycosyl hydrolase [Mollicutes bacterium D7] gi|167704042|gb|EDS18621.1| hypothetical protein CLORAM_01570 [Clostridium ramosum DSM 1402] gi|229382862|gb|EEO32953.1| glycosyl hydrolase [Coprobacillus sp. D7] Length = 1946 Score = 40.5 bits (93), Expect = 0.29, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 26/67 (38%), Gaps = 18/67 (26%) Query: 1 MSVVTV---------ATWNVNSIRAR-----IHNLAAWIKENNPDIICLQETKTEDKNFP 46 M ++ V AT+N+ A I L +K NN DI+ LQE P Sbjct: 22 MPMMKVTAATDNVRLATFNI----AANKKPDITKLNELLKTNNVDIVGLQEVDINTSRNP 77 Query: 47 FETLQSL 53 + L+ Sbjct: 78 YNMLEKF 84 >gi|147788673|emb|CAN65298.1| hypothetical protein VITISV_008130 [Vitis vinifera] Length = 1936 Score = 40.5 bits (93), Expect = 0.29, Method: Composition-based stats. Identities = 12/62 (19%), Positives = 23/62 (37%), Gaps = 11/62 (17%) Query: 201 THHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKP-SDHTPVI 258 +++ N+ R+D ++SP A R +P SDH P++ Sbjct: 889 QGGSFTW-----SGGLNNQXWARLDRFLVSPNWIDQYSRAI----QRRLPRPISDHFPIL 939 Query: 259 VS 260 + Sbjct: 940 LE 941 >gi|321452771|gb|EFX64087.1| hypothetical protein DAPPUDRAFT_267098 [Daphnia pulex] Length = 310 Score = 40.5 bits (93), Expect = 0.29, Method: Composition-based stats. Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 2/37 (5%) Query: 4 VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQET 38 + VA+ N+ I R+ L + N D+ICLQE Sbjct: 1 MKVASINIARISTPERLQLLLNYCVSNEFDVICLQEV 37 >gi|242023630|ref|XP_002432235.1| Nocturnin, putative [Pediculus humanus corporis] gi|212517632|gb|EEB19497.1| Nocturnin, putative [Pediculus humanus corporis] Length = 525 Score = 40.5 bits (93), Expect = 0.29, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 20/56 (35%) Query: 3 VVTVATWNV---------------N---SIR--ARIHNLAAWIKENNPDIICLQET 38 ++TV ++NV N S++ R L IKE + DI+CLQE Sbjct: 173 LITVVSYNVLSQSLLEKHRYLYKRNDEKSLKWEVRSKLLIEEIKEFDADILCLQEI 228 >gi|171778868|ref|ZP_02919930.1| hypothetical protein STRINF_00789 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] gi|171282514|gb|EDT47938.1| hypothetical protein STRINF_00789 [Streptococcus infantarius subsp. infantarius ATCC BAA-102] Length = 271 Score = 40.5 bits (93), Expect = 0.29, Method: Composition-based stats. Identities = 34/276 (12%), Positives = 76/276 (27%), Gaps = 26/276 (9%) Query: 5 TVATWN------VNSIRARIHNLAAWIKE---NNPDIICLQETKTEDKNFPFETLQSL-- 53 T N NS+ L + N D+ICLQE + + + ++ Sbjct: 3 KFLTLNTHSWLEANSL----KKLFDLAENIYIENYDVICLQEINQDIRGLAAKDVEGYEK 58 Query: 54 -----NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108 H + + N + ++ + G D + I + I + + + Sbjct: 59 LPGSPELHCDNYALQLVNYLKSQGRHYYWSWAYNHIGYDKYNEGVVILSKNPIKVKDILV 118 Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168 + H + K + + ++ Sbjct: 119 SEVDDEHDYHTRRVLAAETEVDGKPVTVVSLHMSWFGKGFESEWAKLEKALSDFPKPLVL 178 Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 + T + D+ + ++ + + +++DH+ Sbjct: 179 MGDFNNPTDTAGYDMILNSPLELQDSHKVAKSIQGDHTIIEDIDGWEGNKQSLKVDHVFT 238 Query: 229 SPEATSLLHSARIDTKPRGWTKP--SDHTPVIVSLD 262 S E + S+ + G P SDH + V L+ Sbjct: 239 SKEIE--IQSSTVVFD--GGESPIVSDHFGLAVDLN 270 >gi|168700428|ref|ZP_02732705.1| probable secreted protein [Gemmata obscuriglobus UQM 2246] Length = 263 Score = 40.5 bits (93), Expect = 0.29, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 22/43 (51%), Gaps = 7/43 (16%) Query: 2 SVVTVATWNV------NSIRARIHNLAAWIKENNPDIICLQET 38 +V+ V T+N+ + + + +A IK PD++ LQE Sbjct: 25 NVLRVLTYNIHHGEGTDG-KLDLARIAEVIKAAKPDVVALQEV 66 >gi|268567764|ref|XP_002647867.1| Hypothetical protein CBG23668 [Caenorhabditis briggsae] Length = 526 Score = 40.5 bits (93), Expect = 0.29, Method: Composition-based stats. Identities = 22/202 (10%), Positives = 51/202 (25%), Gaps = 25/202 (12%) Query: 4 VTVATWNVNSI----------RA-RIHNLAAWIKENNPDIICLQETKTEDK--NFPFETL 50 + + T N + R R+ + +++ DI+ LQE + + + Sbjct: 43 LRIVTLNAWCLPQPWPIGSTDRVHRLQKIGEYMRNETYDIVGLQELWSYNDFVRLSEQVK 102 Query: 51 QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR--- 107 + Y + +GV + S++ + +T + F L Sbjct: 103 DAYPYFHYFHSGFTGSGVCVFSRHPIVSTLTSRYSLNGFAHHIHRGDWFGGKVVGLTEVE 162 Query: 108 ---------IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP 158 + + + +F + +I GD N+ P Sbjct: 163 IDGDLRVNFYTTHLHAEYDRENDLYLPHRTAQSFELAQFVRHTARGADVVIVTGDLNMEP 222 Query: 159 QPHDCYNPIIWENDACFTLEVR 180 + Sbjct: 223 CDLGFRLILSHAKLFDAWRMSH 244 >gi|270008339|gb|EFA04787.1| hypothetical protein TcasGA2_TC014836 [Tribolium castaneum] Length = 348 Score = 40.5 bits (93), Expect = 0.30, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 6/50 (12%) Query: 224 DHIMLSPEATSLLHS-ARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQD 272 DHI+++ ++ A I G T SDH P++ L + +PR + Sbjct: 65 DHILVTDSLSNRASDSANI-----GTTITSDHLPLVFDLSVSKPRTPTPE 109 >gi|147791764|emb|CAN75044.1| hypothetical protein VITISV_023140 [Vitis vinifera] Length = 170 Score = 40.5 bits (93), Expect = 0.30, Method: Composition-based stats. Identities = 9/61 (14%), Positives = 22/61 (36%), Gaps = 9/61 (14%) Query: 201 THHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 L+++ + N+ R+D +++ + R SDH P+++ Sbjct: 19 QGGLFTW-----NGGQNNQSWARLDRFLVTQNWLDQFSGVL---QSRLPRPTSDHFPILL 70 Query: 260 S 260 Sbjct: 71 E 71 >gi|321452722|gb|EFX64044.1| hypothetical protein DAPPUDRAFT_118585 [Daphnia pulex] Length = 432 Score = 40.2 bits (92), Expect = 0.30, Method: Composition-based stats. Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 2/38 (5%) Query: 3 VVTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQET 38 ++ V + N+ I R+ L + N D+ICLQE Sbjct: 129 IMKVTSINIARISTPERLQLLLNYCVSNEFDVICLQEV 166 >gi|321449105|gb|EFX61732.1| hypothetical protein DAPPUDRAFT_121080 [Daphnia pulex] Length = 514 Score = 40.2 bits (92), Expect = 0.30, Method: Composition-based stats. Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 2/38 (5%) Query: 3 VVTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQET 38 ++ V + N+ I R+ L + N D+ICLQE Sbjct: 338 IMKVTSINIARISTPERLQLLLNYCVSNEFDVICLQEV 375 >gi|322390045|ref|ZP_08063581.1| endonuclease/exonuclease/phosphatase [Streptococcus parasanguinis ATCC 903] gi|321143252|gb|EFX38694.1| endonuclease/exonuclease/phosphatase [Streptococcus parasanguinis ATCC 903] Length = 793 Score = 40.2 bits (92), Expect = 0.30, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 31/88 (35%), Gaps = 10/88 (11%) Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT--- 249 + A HD YS++ Y + +D+I +S + + Sbjct: 609 TNLMAQHDAGDRYSYF-YRGSNQV------LDNIFISNNMAAKARFEPVHINASFMKEHG 661 Query: 250 KPSDHTPVIVSLDIPEPRKKQQDSTSQN 277 + SDH PV+V +D + + Q Sbjct: 662 RASDHDPVLVQIDFSGAQTPGTPTDDQQ 689 >gi|291239149|ref|XP_002739487.1| PREDICTED: reverse transcriptase-like protein-like [Saccoglossus kowalevskii] Length = 776 Score = 40.2 bits (92), Expect = 0.30, Method: Composition-based stats. Identities = 43/261 (16%), Positives = 84/261 (32%), Gaps = 42/261 (16%) Query: 9 WNVNSIRARIHNLAAWIKENNPDIICLQE--TKTEDKNFPFETLQSLNYHIETCGQKSYN 66 WNV+ I+ + ++ +I E+N D + + E K + Y + Sbjct: 81 WNVHLIQNKATLISDYIVEHNIDALAITESWLKASGDEPIINEVTPAGYTYHHFPRVKST 140 Query: 67 GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDD 126 G I ++ VT +EAT + T ++ +Y P N Sbjct: 141 GGGIAFIFKSSITVTTWKPLQNVTTFEAVEATLRYHGITFKVIIVYRPPPNTKNKFTVSK 200 Query: 127 KISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL 186 + L E + G+ +II + + + + + E+ S Sbjct: 201 FFNEFGDLL---------ESSSTYTGNLSIIGDFNFHWANVSPDPNTRKFQELLDSCNLK 251 Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR 246 Q T H ++F D + +P+ + + +DT Sbjct: 252 Q-------WVNTPTHTHGHTF----------------DLVFTNPDL---ILNVTVDT--- 282 Query: 247 GWTKPSDHTPVIVSLDIPEPR 267 SDH P+ + + +P+P Sbjct: 283 --VYISDHFPIYIQVLLPKPP 301 >gi|67904338|ref|XP_682425.1| hypothetical protein AN9156.2 [Aspergillus nidulans FGSC A4] gi|40742799|gb|EAA61989.1| hypothetical protein AN9156.2 [Aspergillus nidulans FGSC A4] gi|259485420|tpe|CBF82427.1| TPA: endonuclease/exonuclease/phosphatase family protein (AFU_orthologue; AFUA_3G09210) [Aspergillus nidulans FGSC A4] Length = 600 Score = 40.2 bits (92), Expect = 0.30, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 20/45 (44%), Gaps = 2/45 (4%) Query: 223 IDHIMLSPEATS--LLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 +DH+ +S + ++T PSDH P + L++ E Sbjct: 556 LDHMFVSEALAEGARMEHVHVNTWVNYDDAPSDHDPSVAVLNVCE 600 >gi|147812508|emb|CAN68382.1| hypothetical protein VITISV_041532 [Vitis vinifera] Length = 964 Score = 40.2 bits (92), Expect = 0.30, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 15/92 (16%) Query: 1 MSVVT--VATWNV--------NSI---RARIHNLAAWIKENNPDIICLQETKTE--DKNF 45 M+ V + + N+ N R + + +++ NPD++ +QETK E D+ F Sbjct: 157 MAKVREVLCSLNIKVYSRRKNNGSTGSRNKRRMVKDFLRSKNPDVVMIQETKKEKCDRRF 216 Query: 46 PFETLQSLNYHIETCGQKSYNGVAILSKYQPI 77 LQ N+ S ++ + Sbjct: 217 ENMWLQHPNFKENFRNWWSGYQGYGWEGHKFM 248 >gi|47567314|ref|ZP_00238027.1| endonuclease/exonuclease/phosphatase family protein, putative [Bacillus cereus G9241] gi|47555935|gb|EAL14273.1| endonuclease/exonuclease/phosphatase family protein, putative [Bacillus cereus G9241] Length = 327 Score = 40.2 bits (92), Expect = 0.30, Method: Composition-based stats. Identities = 45/274 (16%), Positives = 79/274 (28%), Gaps = 34/274 (12%) Query: 11 VNSIRARIHNLAAWIKENNPDIICLQET--K------TEDKNFPFETLQSL------NYH 56 VN + N+ ++++ D LQE K + F + L NY Sbjct: 66 VN-----LKNMLSFLQNEKSDFALLQEVDIKSMRSFDVNEHEFLKKGLPDYVSSFGKNYD 120 Query: 57 IETCGQKSYNGVAI-------LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 + N + SKY R + I T+ + Sbjct: 121 TKWVPVPITNPMGYAEAGLSTFSKYTVQTAKRFQLPGMEPWPKRLFDLDRAIVEHTIPVN 180 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 N + + YD+ K+ + F + + GDY I+ + Sbjct: 181 NGKHVRLVNLHLSAYDEGGKIRKQQVEFLKEYMNKHYKN---GDYVIMGGDWNQLVSNAQ 237 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 +D F E + +L + D + D +N ID ++S Sbjct: 238 LSDPKFVKERPEWLVELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVS 297 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 P + + K + SDH PV + Sbjct: 298 PN----VEIVNVQGKDLKFEN-SDHNPVSAVFKL 326 >gi|228942241|ref|ZP_04104781.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228975171|ref|ZP_04135730.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228981810|ref|ZP_04142105.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis Bt407] gi|228777922|gb|EEM26194.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis Bt407] gi|228784692|gb|EEM32712.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228817575|gb|EEM63660.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326942895|gb|AEA18791.1| endonuclease/exonuclease/phosphatase family protein [Bacillus thuringiensis serovar chinensis CT-43] Length = 352 Score = 40.2 bits (92), Expect = 0.31, Method: Composition-based stats. Identities = 44/267 (16%), Positives = 78/267 (29%), Gaps = 29/267 (10%) Query: 18 IHNLAAWIKENNPDIICLQET--K------TEDKNFPFETLQSL------NYHIETCGQK 63 + N+ ++++ N D LQE K + F + L NY + Sbjct: 93 LKNMLSFLQNENSDFALLQEVDIKSLRSFDVNEHEFLKKGLPDYVSSFGKNYDTKWVPVP 152 Query: 64 SYNGVAI-------LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 N + SKY E R + I + + N Sbjct: 153 ITNPMGYAEAGLSTFSKYTVQEAKRFQLPGMEPWPKRLFDLDRAIVEYKIPVNNGKHVRL 212 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + + YD+ K+ + + + + GDY II + +D F Sbjct: 213 VNLHLSAYDEGGKIRKQQVEYLKEYMNKHYEN---GDYVIIGGDWNQLVSNAQLSDPKFV 269 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 E + +L + D + D +N ID ++SP + Sbjct: 270 KERPEWLVELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN----V 325 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263 + K + SDH PV + Sbjct: 326 EIVNVQGKDLKFEN-SDHNPVSAVFKL 351 >gi|219126251|ref|XP_002183375.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217405131|gb|EEC45075.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 808 Score = 40.2 bits (92), Expect = 0.31, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 28/81 (34%), Gaps = 32/81 (39%) Query: 3 VVTVATWN------------VN---SIR-------ARIHNLAAWIKE----NNP--DIIC 34 ++V +WN VN S R AR + A +K P D++C Sbjct: 78 TISVVSWNMLAEAYCSPRSHVNLPASYRKVVFDRTARRDRIFAILKRLAQQQQPVIDVLC 137 Query: 35 LQETKTEDKNFPFETLQSLNY 55 LQE + LQ Y Sbjct: 138 LQEVDVHLD----DALQRWGY 154 >gi|149191611|ref|ZP_01869856.1| extracellular nuclease-related protein [Vibrio shilonii AK1] gi|148834569|gb|EDL51561.1| extracellular nuclease-related protein [Vibrio shilonii AK1] Length = 872 Score = 40.2 bits (92), Expect = 0.31, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 32/97 (32%), Gaps = 29/97 (29%) Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA---RI-- 241 + G+ + + H YS+ D +DHI++SP + + A I Sbjct: 761 HSYGYVNVLGEMHPQGWSYSYNDEVGA---------LDHILISPSLSKRVVDATEWHINA 811 Query: 242 -------DTKPRGWTKP--------SDHTPVIVSLDI 263 P SDH P ++ L++ Sbjct: 812 AESTLFDYNDEYKGDLPKYQDHYRSSDHDPAVIDLNM 848 >gi|50285291|ref|XP_445074.1| hypothetical protein [Candida glabrata CBS 138] gi|49524377|emb|CAG57974.1| unnamed protein product [Candida glabrata] Length = 471 Score = 40.2 bits (92), Expect = 0.31, Method: Composition-based stats. Identities = 24/94 (25%), Positives = 34/94 (36%), Gaps = 2/94 (2%) Query: 17 RIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYH-IETCGQKSYNGVAILSKY 74 R L IK N DI CLQE + F E L Y I +GV I K Sbjct: 110 RSKVLLHEIKHYNADICCLQEIDDVQYDLFWSEELPKFGYKTIYFHQDSKSHGVMIAWKE 169 Query: 75 QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108 + ++ +H+ + I+ N L + Sbjct: 170 ELFQLESHMNIEFDKEAPAGIQPRTRTNNVGLLV 203 >gi|326319964|ref|NP_001191852.1| protein angel [Acyrthosiphon pisum] gi|328726434|ref|XP_003248895.1| PREDICTED: LOW QUALITY PROTEIN: protein angel homolog 2-like [Acyrthosiphon pisum] Length = 438 Score = 40.2 bits (92), Expect = 0.31, Method: Composition-based stats. Identities = 36/205 (17%), Positives = 57/205 (27%), Gaps = 8/205 (3%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQP 76 R L IK+ N DIIC QE + N+ F+ L L Y+ + ++ Y+ Sbjct: 99 RRQLLLKEIKQFNADIICFQEVQESHLNWFFKKLSDLGYNGVYKKRTRFHCDGCAIYYRN 158 Query: 77 IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 + Q LR+ N I ST + Sbjct: 159 DKFTLKEKVTVEYNQPGINVLDRDNVGIVLRLSPRKNEAENIIVSTTHILYNKKRHDIKL 218 Query: 137 FASQRLELEEPLIFAGDYNIIPQPH-DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAI 195 L E + + + + Y+PII D + F + Sbjct: 219 AQVHLLLAEIERVAYKGHKKVGDDNIPEYHPIILTGDFNLEPNTAVYDFLINGALFYSNL 278 Query: 196 RATHDTHHLYSFWDYYADSWSKNKG 220 + + W S N G Sbjct: 279 QKP-------TLWSQNNQSGRCNMG 296 >gi|260574139|ref|ZP_05842144.1| conserved hypothetical protein [Rhodobacter sp. SW2] gi|259023605|gb|EEW26896.1| conserved hypothetical protein [Rhodobacter sp. SW2] Length = 316 Score = 40.2 bits (92), Expect = 0.31, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 20/67 (29%) Query: 209 DYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD-----------HTPV 257 DY AD+ G+R+D+I+ S + T + + + W SD H PV Sbjct: 259 DYTADAGPG--GLRVDYILPSVDLT--VTGSGVL-----WPPESDPLAATLAAASRHRPV 309 Query: 258 IVSLDIP 264 V +++P Sbjct: 310 WVEINLP 316 >gi|145348823|ref|XP_001418843.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144579073|gb|ABO97136.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 325 Score = 40.2 bits (92), Expect = 0.31, Method: Composition-based stats. Identities = 33/284 (11%), Positives = 68/284 (23%), Gaps = 49/284 (17%) Query: 4 VTVATWNVN-SIRA---RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 + + T+NV A R+ L I+ + ++CLQE T F L++ + Sbjct: 44 LRLLTYNVWFGDVAQAERLEALGKVIETCDAHVVCLQEV-TPQALF---VLRAQPWWDAY 99 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 S +V F + + Sbjct: 100 VVGPKPPLQEYFSMMLFKRVVRSEVLKRDQY--AFRNSQMGRYLDVVSHMRCPSSRATFA 157 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 T + + R E + + W++ Sbjct: 158 LGTSHLESYISASRTSARERAVQMSE-----CFSWLNQHENAIFMGDTNWDDKDGAVPLP 212 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK-GIRIDHIMLSPEAT----S 234 +++ D ++ + R+D + + Sbjct: 213 DGWRDAWLEAR---------PGDPGFTY-DARKNAMLRGYLQKRLDRAFV--KLKHFDVK 260 Query: 235 LLHSARIDTKP----------RGWTK-------PSDHTPVIVSL 261 + D P RG + PSDH ++++L Sbjct: 261 RVEMVGTDPIPGVTYHKTVSNRGKAQILELPVVPSDHFGLLLTL 304 >gi|120556472|ref|YP_960823.1| endonuclease/exonuclease/phosphatase [Marinobacter aquaeolei VT8] gi|120326321|gb|ABM20636.1| Endonuclease/exonuclease/phosphatase [Marinobacter aquaeolei VT8] Length = 286 Score = 40.2 bits (92), Expect = 0.31, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 23/48 (47%), Gaps = 11/48 (22%) Query: 221 IR----IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 R +DHI++SP + + + + P SDH P+ + + +P Sbjct: 239 WRPEKALDHILVSPSLE--IRRSEVVSYP-----VSDHLPIAMDVALP 279 >gi|302846967|ref|XP_002955019.1| hypothetical protein VOLCADRAFT_106614 [Volvox carteri f. nagariensis] gi|300259782|gb|EFJ44007.1| hypothetical protein VOLCADRAFT_106614 [Volvox carteri f. nagariensis] Length = 831 Score = 40.2 bits (92), Expect = 0.31, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 1/44 (2%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDK-NFPFETLQSLNYHIET 59 R NL + + DI+CLQE +++ +F LQ Y Sbjct: 251 RKRNLLRELLSHKADILCLQEVQSDHYLDFWAPELQRAGYVAIY 294 >gi|68487904|ref|XP_712169.1| potential phospholipase C/sphingomyelinase Isc1p [Candida albicans SC5314] gi|46433540|gb|EAK92976.1| potential phospholipase C/sphingomyelinase Isc1p [Candida albicans SC5314] Length = 438 Score = 40.2 bits (92), Expect = 0.31, Method: Composition-based stats. Identities = 37/302 (12%), Positives = 84/302 (27%), Gaps = 38/302 (12%) Query: 4 VTVATWNVNSIR-------ARIHNLAAWIK-----ENNPDIICLQETKTEDKNFPFETLQ 51 + + T+N ++ R+ +A + + + DI+ LQE E+ + + Sbjct: 20 IKLLTFNTWGLKFISKHRKERLRAIADALANPKSPDEDYDIVALQEIWCEEDWQYLDLVC 79 Query: 52 SLNY---HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108 Y + G S G+A+LSK E + + A F + + + + Sbjct: 80 RPRYPYRRVFKAGIVSGPGLAVLSKIFIAETFLYRFPINGRPSAFFRGDFYVGKSIAVTM 139 Query: 109 GN--------------LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDY 154 ++ + F + + +I GD Sbjct: 140 FQPHHPDILPIALLNSHMHAPYGSGDASYSTHRACQAWDFAKLVRMLKKAGYAVIQVGDL 199 Query: 155 NIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADS 214 N P + + + + T ++ + + Sbjct: 200 NSKPDSLPYKLFTVEGGLTDSWNVLNKDNVVPNDQIATLSLEDQISLAGV-TCNSRLNTW 258 Query: 215 WSKNKGI---RIDHIMLSPE----ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPR 267 R+D+ ++ ++ + P + SDH V L I Sbjct: 259 RESRPLWEACRLDYALIDASNITPVSAQVKFVDKLPPPLSCSY-SDHFAYSVDLVIRPKE 317 Query: 268 KK 269 ++ Sbjct: 318 ER 319 >gi|324993637|gb|EGC25556.1| RgfB protein [Streptococcus sanguinis SK405] Length = 271 Score = 40.2 bits (92), Expect = 0.32, Method: Composition-based stats. Identities = 27/244 (11%), Positives = 64/244 (26%), Gaps = 9/244 (3%) Query: 18 IHNLAAWIKENNPDIICLQETK--TEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75 ++ L I + D+ICLQE TE + Q + + + Sbjct: 21 LNQLVERILQEKYDVICLQEVNQLTESEQVVQAPFYQAVEGAIAIHQDHFALCLVEKLAE 80 Query: 76 PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135 + + E ++ + L + + N T + Sbjct: 81 AGLDYHWSWAYNHIGFDIYNEGVAILSRKPLTPREVLVSEANDPTDYHTRKVLLAETEVD 140 Query: 136 RF---ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN--MG 190 + F G++ + + + +Q +Q + + Sbjct: 141 GQLLTIASCHLSWWDKGFQGEWAKLEEELLKVKTPLVLMGDFNNPVGQQGYQTILASPLK 200 Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 D+ + + A ++ID++ S + + + + Sbjct: 201 LQDSHAVAREAIGEATVEGTIAGWDDNKHALKIDYVFTSQGMD--VERSAVVFDGKETPV 258 Query: 251 PSDH 254 SDH Sbjct: 259 VSDH 262 >gi|239790439|dbj|BAH71781.1| ACYPI000743 [Acyrthosiphon pisum] Length = 438 Score = 40.2 bits (92), Expect = 0.32, Method: Composition-based stats. Identities = 36/205 (17%), Positives = 57/205 (27%), Gaps = 8/205 (3%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQP 76 R L IK+ N DIIC QE + N+ F+ L L Y+ + ++ Y+ Sbjct: 99 RRQLLLKEIKQFNADIICFQEVQESHLNWFFKKLSDLGYNGVYKKRTRFHCDGCAIYYRN 158 Query: 77 IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 + Q LR+ N I ST + Sbjct: 159 DKFTLKEKVTVGYNQPGINVLDRDNVGIVLRLSPRKNEAENIIVSTTHILYNKKRHDIKL 218 Query: 137 FASQRLELEEPLIFAGDYNIIPQPH-DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAI 195 L E + + + + Y+PII D + F + Sbjct: 219 AQVHLLLAEIERVAYKGHKKVGDDNIPEYHPIILTGDFNLEPNTAVYDFLINGALFYSNL 278 Query: 196 RATHDTHHLYSFWDYYADSWSKNKG 220 + + W S N G Sbjct: 279 QKP-------TLWSQNNQSGRCNMG 296 >gi|169787282|gb|ACA80080.1| putative DNA lyase [Glomerella tucumanensis] Length = 233 Score = 40.2 bits (92), Expect = 0.32, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 22/57 (38%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81 + DI+ +QETK + K+ + + + + K G + ++ Y Sbjct: 2 FEILEADIVVMQETKVQRKDLHDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATCC 58 >gi|13940623|gb|AAK50425.1|AC021891_26 Hypothetical protein [Oryza sativa Japonica Group] Length = 250 Score = 40.2 bits (92), Expect = 0.32, Method: Composition-based stats. Identities = 18/116 (15%), Positives = 32/116 (27%), Gaps = 11/116 (9%) Query: 2 SVVTVATWNVNSIR------ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55 + T+NV IR R+ L I+ +NPD IC Q N E ++ L Sbjct: 139 KTFKIMTYNVW-IREDIELHRRLGALGDLIQLHNPDFICFQ----VPGNKENEKIEPLPV 193 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 + + + + + T + + Sbjct: 194 VVLHPPARGLPPNLEAKLAGRVRMRPGQSWTAACAKLVARRCTPPRYGEPFPVPTH 249 >gi|328853940|gb|EGG03075.1| hypothetical protein MELLADRAFT_109522 [Melampsora larici-populina 98AG31] Length = 267 Score = 40.2 bits (92), Expect = 0.32, Method: Composition-based stats. Identities = 21/105 (20%), Positives = 33/105 (31%), Gaps = 17/105 (16%) Query: 1 MSVVTVATWNV-----NS--------IRARIHNLAAWIKENNPDIICLQETKTEDKNF-- 45 +S++ +AT+N+ NS R+ + + PDII QE D F Sbjct: 7 LSILKLATYNIRYSPTNSHPILPEAPWSTRLPLILNQLNWEEPDIIGAQEV--LDHQFID 64 Query: 46 PFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDV 90 E L L Y G+ + + L Sbjct: 65 LLEGLHQLGYTGIGVGRDDGKRLGEYAPIFWKSDQFELVDHHYFW 109 >gi|295425006|ref|ZP_06817715.1| conserved hypothetical protein [Lactobacillus amylolyticus DSM 11664] gi|295065324|gb|EFG56223.1| conserved hypothetical protein [Lactobacillus amylolyticus DSM 11664] Length = 367 Score = 40.2 bits (92), Expect = 0.32, Method: Composition-based stats. Identities = 37/273 (13%), Positives = 70/273 (25%), Gaps = 29/273 (10%) Query: 13 SIRARIHNLAAWIKENNPDIICLQETKTEDK--------NFPFETLQSL------NYHIE 58 S+ A + +K+ NPD + QE T N ++ N+H Sbjct: 101 SVLASTDGVIKTMKKQNPDFMLFQEIDTHSTRSHYVNQVNLVEHAFKNYDHVFANNFHSA 160 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPG--DDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 Y+ + H+ + + FT + + + + G Sbjct: 161 YLAWPLYDPHGSVQSGLLSMSKYHMQSAVRRKYPVSSAFISKFTDLDRCFTVMHYPIKGG 220 Query: 117 NP---ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 I S R + +E AG+Y I+ + Sbjct: 221 KELIVINSHMSAYDKGGKMRKAQMKILSKVIEAEYK-AGNYVIVGGDFNHALGRDMLTHF 279 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSP 230 ++ L + + + K N D ++S Sbjct: 280 DHQEKIPSWVSVLDQKMLPKDFIMVKATNRERVATVRSTDMKYRPKVNYQTVGDGFIISK 339 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + I+T R DH PV + + Sbjct: 340 NIKAKATD--INTDYRYA----DHNPVRLGFSL 366 >gi|242079219|ref|XP_002444378.1| hypothetical protein SORBIDRAFT_07g021012 [Sorghum bicolor] gi|241940728|gb|EES13873.1| hypothetical protein SORBIDRAFT_07g021012 [Sorghum bicolor] Length = 397 Score = 40.2 bits (92), Expect = 0.32, Method: Composition-based stats. Identities = 16/102 (15%), Positives = 35/102 (34%), Gaps = 7/102 (6%) Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 + + + + + ++ +Y++ + ID + Sbjct: 67 CCKEKNNGVVNVKWVDLFNEWINRNGLIELKPSNRVYTWTNNKKQPIMAA----IDKVFC 122 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQ 270 S A + T+ RG SDH P+I++L+ E +K Sbjct: 123 SSNFEQKFPLAFVSTRARG---HSDHVPLILNLNCSERKKPS 161 >gi|218197223|gb|EEC79650.1| hypothetical protein OsI_20886 [Oryza sativa Indica Group] Length = 835 Score = 40.2 bits (92), Expect = 0.32, Method: Composition-based stats. Identities = 10/67 (14%), Positives = 27/67 (40%), Gaps = 5/67 (7%) Query: 204 LYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 Y++ + N +R+D + + S++++ + SDH PV++ + Sbjct: 400 PYTYDNKREG--INNVRVRLDRAVADDGWRDMFRSSQVEHLI---SPCSDHCPVVLKFCV 454 Query: 264 PEPRKKQ 270 + + Sbjct: 455 DTNQPAR 461 >gi|154286664|ref|XP_001544127.1| hypothetical protein HCAG_01173 [Ajellomyces capsulatus NAm1] gi|150407768|gb|EDN03309.1| hypothetical protein HCAG_01173 [Ajellomyces capsulatus NAm1] Length = 616 Score = 40.2 bits (92), Expect = 0.32, Method: Composition-based stats. Identities = 30/241 (12%), Positives = 55/241 (22%), Gaps = 32/241 (13%) Query: 22 AAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81 A DI+ QETK + K+ + + + K I Sbjct: 1 MAMFDALEADIVIFQETKIQRKDLQDDMVLVNGWDCFFSLPK------YKKGPNSICCPI 54 Query: 82 HLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQR 141 + + + + R G + + Sbjct: 55 RAEEGITGILCLPTSGSNLSSPTSFRDLPEEAQIGG--------YPTAEQLALSDVDAAT 106 Query: 142 LELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT 201 L+ E + + C D T V +++N+ Sbjct: 107 LDSEGRCMILEFPAFVLIGVYCPANRDETRDGFRTGFVNVLDARVRNLATMGKRVIVMGD 166 Query: 202 HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 ++ G +ID S A + + + SDH PV L Sbjct: 167 LNI--------------SGSQID----SARALEGIRKGTLTDSEFVSSPGSDHCPVFAEL 208 Query: 262 D 262 Sbjct: 209 K 209 >gi|262166640|ref|ZP_06034377.1| extracellular nuclease-related protein [Vibrio mimicus VM223] gi|262026356|gb|EEY45024.1| extracellular nuclease-related protein [Vibrio mimicus VM223] Length = 734 Score = 40.2 bits (92), Expect = 0.33, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 29/77 (37%), Gaps = 26/77 (33%) Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT------------------ 249 W Y S++ G +DH+++SP + + A D G Sbjct: 640 WSY---SFNDEVGA-LDHLLVSPSLKTKVVDAT-DWHINGAESTLFDYNDEFKGNLPKYN 694 Query: 250 ---KPSDHTPVIVSLDI 263 + SDH P ++ L+I Sbjct: 695 DQFRASDHDPAVLELNI 711 >gi|258620504|ref|ZP_05715542.1| Nuclease-related protein [Vibrio mimicus VM573] gi|258587383|gb|EEW12094.1| Nuclease-related protein [Vibrio mimicus VM573] Length = 869 Score = 40.2 bits (92), Expect = 0.33, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 29/77 (37%), Gaps = 26/77 (33%) Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT------------------ 249 W Y S++ G +DH+++SP + + A D G Sbjct: 775 WSY---SFNDEVGA-LDHLLVSPSLKTKVVDAT-DWHINGAESTLFDYNDEFKGNLPKYN 829 Query: 250 ---KPSDHTPVIVSLDI 263 + SDH P ++ L+I Sbjct: 830 DQFRASDHDPAVLELNI 846 >gi|254486542|ref|ZP_05099747.1| endonuclease/exonuclease/phosphatase family protein [Roseobacter sp. GAI101] gi|214043411|gb|EEB84049.1| endonuclease/exonuclease/phosphatase family protein [Roseobacter sp. GAI101] Length = 341 Score = 40.2 bits (92), Expect = 0.33, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 19/52 (36%), Gaps = 12/52 (23%) Query: 223 IDHIMLSPEATSLLH-----------SARIDTKPRG-WTKPSDHTPVIVSLD 262 +D+IM+SP+ T D R SDH PV + D Sbjct: 289 LDYIMVSPQFTDNNARWRIWHPLDDPECWADADLRDALVTASDHFPVTIEFD 340 >gi|189463755|ref|ZP_03012540.1| hypothetical protein BACINT_00088 [Bacteroides intestinalis DSM 17393] gi|189438705|gb|EDV07690.1| hypothetical protein BACINT_00088 [Bacteroides intestinalis DSM 17393] Length = 516 Score = 40.2 bits (92), Expect = 0.33, Method: Composition-based stats. Identities = 19/135 (14%), Positives = 36/135 (26%), Gaps = 9/135 (6%) Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + + + + L D I + +I EN E+ Sbjct: 144 DWLHHFPVAMCAMENGKHVAIEVPSAMNLQECWDL-INMSEKTRKHCMILENCCYDWFEM 202 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWD-YYADSWSKNKGIRIDH-------IMLSPE 231 Q + H L FWD Y+ + + G R+D+ + + Sbjct: 203 NTLNMAQQGVFGEVIRGQGAYIHELSPFWDHYWKNGENDKLGWRLDYNKKHRGDVYATHG 262 Query: 232 ATSLLHSARIDTKPR 246 + + I R Sbjct: 263 LGPVAQAFDIHRGDR 277 >gi|159487996|ref|XP_001702008.1| protein of endonuclease / exonuclease / phosphatase family [Chlamydomonas reinhardtii] gi|158271465|gb|EDO97283.1| protein of endonuclease / exonuclease / phosphatase family [Chlamydomonas reinhardtii] Length = 573 Score = 40.2 bits (92), Expect = 0.33, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 1/44 (2%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDK-NFPFETLQSLNYHIET 59 R NL + + DI+CLQE +++ +F LQ Y Sbjct: 250 RKRNLLRELLAHKADILCLQEVQSDHYVDFWAPELQRAGYVAIY 293 >gi|153808285|ref|ZP_01960953.1| hypothetical protein BACCAC_02573 [Bacteroides caccae ATCC 43185] gi|149129188|gb|EDM20404.1| hypothetical protein BACCAC_02573 [Bacteroides caccae ATCC 43185] Length = 673 Score = 40.2 bits (92), Expect = 0.33, Method: Composition-based stats. Identities = 33/285 (11%), Positives = 71/285 (24%), Gaps = 42/285 (14%) Query: 4 VTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 + V WN+ + + IK++ D++ +QE + Sbjct: 405 LKVLQWNIWHGGKHLGKDG----RERIIDLIKQSGADVVTMQEGYGSQEMIAKAI----- 455 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 + + + S+Y +I T + + + +L Sbjct: 456 -GFNLQTPSPGDNLCLFSRYPIQKIKTKNTFYSNPAIITLPS------GKKVYLNACWLR 508 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI-IWENDA 173 + T Y L L + + I I N Sbjct: 509 YAYRPEYTCYYANYGMDTHRWAAEDSILALVDMKRLLENDLIPYVDSSMPVIIGGDFNSC 568 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY--SFWDYYADSWSKNKG----------- 220 ++ + + + + +F + D + +G Sbjct: 569 SHLDWTHKAAPIHFGYIAEELPVSRYMLDKGFRDTFREINPDELERGEGTYAVIYGQSQT 628 Query: 221 IRIDHIMLSPEATSLLHSARIDTK--PRGWTKPSDHTPVIVSLDI 263 RID I S +++I P DH V+ ++ Sbjct: 629 SRIDFIY-SKGNGIKTVASKIVRTMPEIDDVWPGDHAAVLTVFEL 672 >gi|299145012|ref|ZP_07038080.1| putative endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_23] gi|298515503|gb|EFI39384.1| putative endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_23] Length = 277 Score = 40.2 bits (92), Expect = 0.33, Method: Composition-based stats. Identities = 32/274 (11%), Positives = 65/274 (23%), Gaps = 44/274 (16%) Query: 3 VVTVATWNVNSIRAR------IHNLAAWIKENNPDIICLQE----T-KTEDKNFPFETLQ 51 +V V ++N+ S + + +A IK+ NPD+ LQE T K E + + Sbjct: 37 LVKVMSYNIYSGQKAYSGKKGMEAIAQVIKKINPDLAGLQEFETKTNKVEKADIIALMKE 96 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 V I + + R + Sbjct: 97 VTGMPYAFF--VKTRDVDGGEYGNLILSKYPISDEVNYDLPRIETVEDVYPRSMGVVKTE 154 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 G T + R + + + + + + Sbjct: 155 KDGKGFYFGVTHLSHVGNETNRINQTTTIIEKTKGLDK---------PMILTGDFNALAD 205 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 + + N + ID ++ +P+ Sbjct: 206 SGPMKILYERFEIGCLNGNYGLTTGTPVPVKA-------------------IDFVLYTPD 246 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 + + SDH PV+ + I + Sbjct: 247 DGMSPKAYDVYYDAYVE---SDHFPVVATFSIND 277 >gi|147859622|emb|CAN83120.1| hypothetical protein VITISV_043394 [Vitis vinifera] Length = 1596 Score = 40.2 bits (92), Expect = 0.33, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 22/56 (39%), Gaps = 7/56 (12%) Query: 205 YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 +++ + + R+D M+SP + T+ R DH P+I+ Sbjct: 712 FTW----SGGFQNQAWARLDRFMVSPSWLDQFRNV---TQKRLSRPILDHFPIIIE 760 >gi|315037288|ref|YP_004030856.1| hypothetical protein LA2_00290 [Lactobacillus amylovorus GRL 1112] gi|312275421|gb|ADQ58061.1| hypothetical protein LA2_00290 [Lactobacillus amylovorus GRL 1112] Length = 367 Score = 40.2 bits (92), Expect = 0.34, Method: Composition-based stats. Identities = 37/273 (13%), Positives = 70/273 (25%), Gaps = 29/273 (10%) Query: 13 SIRARIHNLAAWIKENNPDIICLQETKTEDK--------NFPFETLQSL------NYHIE 58 S+ A + +K+ NPD + QE T N ++ N+H Sbjct: 101 SVLASTDGVIKTMKKQNPDFMLFQEIDTHSTRSHYVNQVNLVEHAFKNYDHVFANNFHSA 160 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPG--DDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 Y+ + H+ + + FT + + + + G Sbjct: 161 YLAWPLYDPHGSVQSGLLSMSKYHMQSAVRRKYPVSSAFISKFTDLDRCFTVMHYPIKGG 220 Query: 117 NP---ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 I S R + +E AG+Y I+ + Sbjct: 221 KELIVINSHMSAYDKGGKMRKAQMKILSKVIEAEYK-AGNYVIVGGDFNHALGRDMLTHF 279 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSP 230 ++ L + + + K N D ++S Sbjct: 280 DHQEKIPSWVSVLDQKMLPKDFIMVKATNRERVATVRSTDMKYRPKVNYQTVGDGFIISK 339 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + I+T R DH PV + + Sbjct: 340 NIKAKATD--INTDYRYA----DHNPVRLGFSL 366 >gi|307167078|gb|EFN60867.1| RNA-directed DNA polymerase from mobile element jockey [Camponotus floridanus] Length = 71 Score = 40.2 bits (92), Expect = 0.34, Method: Composition-based stats. Identities = 9/37 (24%), Positives = 20/37 (54%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETK 39 + +A+WN N + I + +I+ + D++ + ET Sbjct: 1 TLKIASWNANRLNQHIQEVKTFIQNQDLDLLLISETH 37 >gi|147826521|emb|CAN72914.1| hypothetical protein VITISV_034007 [Vitis vinifera] Length = 1586 Score = 40.2 bits (92), Expect = 0.34, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 4/40 (10%) Query: 4 VTV--ATWNVNSIRARIHN--LAAWIKENNPDIICLQETK 39 + + +WNV + A IK+N D++CL ETK Sbjct: 1 MKIRLLSWNVRGANNCDKRKVIKALIKKNRVDLVCLXETK 40 >gi|167587986|ref|ZP_02380374.1| Endonuclease/exonuclease/phosphatase [Burkholderia ubonensis Bu] Length = 253 Score = 40.2 bits (92), Expect = 0.34, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 17/46 (36%), Gaps = 17/46 (36%) Query: 4 VTVATWNVNSIRARIHNLAAW-----------IKENNPDIICLQET 38 + +AT+N+ W I E + D+I LQE Sbjct: 19 LRIATYNIRG------GFGIWHAAAADRIAAVIDELDADVIALQEV 58 Score = 40.2 bits (92), Expect = 0.39, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 3/45 (6%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPR 267 +D I + P LL + R + SDH P++ + +P P Sbjct: 206 LDRIWIHPG--ELLIDVAVHRSARAR-RASDHYPLVARMRVPAPP 247 >gi|163793638|ref|ZP_02187613.1| Endonuclease/exonuclease/phosphatase [alpha proteobacterium BAL199] gi|159181440|gb|EDP65955.1| Endonuclease/exonuclease/phosphatase [alpha proteobacterium BAL199] Length = 258 Score = 40.2 bits (92), Expect = 0.34, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 20/48 (41%), Gaps = 15/48 (31%) Query: 1 MSVVTVATWNVNSI----------RARIHNLAAWIKENNPDIICLQET 38 M+ V V TWN++ R R I + +PDI +QE Sbjct: 1 MNSVRVLTWNIHGFLGQDGGFDPERVR-----RIIADLSPDIAAIQEV 43 >gi|156386625|ref|XP_001634012.1| predicted protein [Nematostella vectensis] gi|156221090|gb|EDO41949.1| predicted protein [Nematostella vectensis] Length = 244 Score = 40.2 bits (92), Expect = 0.34, Method: Composition-based stats. Identities = 37/258 (14%), Positives = 77/258 (29%), Gaps = 28/258 (10%) Query: 2 SVVTVATWNVNSIR-----ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56 + + + TWNV R ++ + I++ DI+ + E + + + + Sbjct: 9 TKIRLGTWNV---RTMYETSKAAQVLNEIEKYQLDILGISECRWTGSG---KQVTNNGSA 62 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 I G + + I L N++ ++ L Sbjct: 63 IIWSGHPHRHE----REVAIIVSKAKLKTLLEWEPISDRLIRARFNSKHSKLTILQCYAE 118 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 Y++ + R R + + A D + + + + ++ Sbjct: 119 EEDKDEWYEELQVAVPRVPRHDLLLIMGDINAKAASDNTNFERAMEKHGCGVMNDNGRRF 178 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 E N H H ++ D +KN+ IDH+ ++ + L Sbjct: 179 AEFCLK-----NNCIIGGTIFPHKNLHKVTWNS--PDGHTKNQ---IDHVAINGKWRRSL 228 Query: 237 HSARIDTKPRGWTKPSDH 254 R+ RG SDH Sbjct: 229 QDVRVY---RGADVYSDH 243 >gi|315635841|ref|ZP_07891103.1| endonuclease/exonuclease/phosphatase [Arcobacter butzleri JV22] gi|315479820|gb|EFU70491.1| endonuclease/exonuclease/phosphatase [Arcobacter butzleri JV22] Length = 313 Score = 40.2 bits (92), Expect = 0.34, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 6/46 (13%) Query: 223 IDHIMLSPEATSLLHSARIDTKPR-----GWTKPSDHTPVIVSLDI 263 +D+I +S E + S + K G K SDH V+ ++I Sbjct: 269 LDYIFVSKEL-QKISSYEVLDKHLQKNHNGSLKQSDHAQVVCEIEI 313 >gi|323344203|ref|ZP_08084429.1| endonuclease/exonuclease/phosphatase family protein [Prevotella oralis ATCC 33269] gi|323094932|gb|EFZ37507.1| endonuclease/exonuclease/phosphatase family protein [Prevotella oralis ATCC 33269] Length = 317 Score = 40.2 bits (92), Expect = 0.34, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 20/62 (32%), Gaps = 21/62 (33%) Query: 223 IDHIMLSPEATSLLHSARIDTKP--------RGWTKP-------------SDHTPVIVSL 261 +DHI+ + L RI P G +P SDH P++ Sbjct: 252 LDHILADEDLADSLVECRIHDAPFLLTDDKTYGGKQPFRTYIGPKYQQGFSDHLPLVARF 311 Query: 262 DI 263 I Sbjct: 312 RI 313 >gi|325955766|ref|YP_004286376.1| hypothetical protein LAC30SC_00225 [Lactobacillus acidophilus 30SC] gi|325332331|gb|ADZ06239.1| hypothetical protein LAC30SC_00225 [Lactobacillus acidophilus 30SC] Length = 367 Score = 40.2 bits (92), Expect = 0.34, Method: Composition-based stats. Identities = 37/273 (13%), Positives = 70/273 (25%), Gaps = 29/273 (10%) Query: 13 SIRARIHNLAAWIKENNPDIICLQETKTEDK--------NFPFETLQSL------NYHIE 58 S+ A + +K+ NPD + QE T N ++ N+H Sbjct: 101 SVLASTDGVIKTMKKQNPDFMLFQEIDTHSTRSHYVNQVNLVEHAFKNYDHVFANNFHSA 160 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPG--DDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 Y+ + H+ + + FT + + + + G Sbjct: 161 YLAWPLYDPHGSVQSGLLSMSKYHMQSAVRRKYPVSSAFISKFTDLDRCFTVMHYPIKGG 220 Query: 117 NP---ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 I S R + +E AG+Y I+ + Sbjct: 221 KELIVINSHMSAYDKGGKMRKAQMKILSKVIEAEYK-AGNYVIVGGDFNHALGRDMLTHF 279 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSP 230 ++ L + + + K N D ++S Sbjct: 280 DHQEKIPSWVSVLDQKMLPKDFIMVKATNRERVATVRSTDMKYRPKVNYQTVGDGFIISK 339 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + I+T R DH PV + + Sbjct: 340 NIKAKATD--INTDYRYA----DHNPVRLGFSL 366 >gi|325690925|gb|EGD32925.1| RgfB protein [Streptococcus sanguinis SK115] Length = 271 Score = 40.2 bits (92), Expect = 0.35, Method: Composition-based stats. Identities = 28/254 (11%), Positives = 63/254 (24%), Gaps = 29/254 (11%) Query: 18 IHNLAAWIKENNPDIICLQETK--TEDKNFPFETLQSLNYHIETCGQKSYNGVAILS--- 72 ++ LA I + D+ICLQE TE + Y + + L Sbjct: 21 LNQLAERILQEKYDVICLQEVNQLTESEQVVQAPF----YQAVEGAIEIHQDHFALCLVE 76 Query: 73 ------KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDD 126 + G D+ + I + + + + + P + Sbjct: 77 KLAEAGLDYHWSWAYNHIGFDIYNEGVAILSRKPLAPREVLVSEANDPRDYHTRKVLLAE 136 Query: 127 KISWIK------RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + L + + + E + A + + + Sbjct: 137 TEVEGQLLTIASCHLSWWDKGFQGEWAKLEAELLKAETPLVLMGDFNNPVGQQGYQTILA 196 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + + + WD ++ID++ S + + Sbjct: 197 SPLKLQDSHTAAKEAIGEATVEGTIAGWD------DNKHALKIDYVFTSQGMD--VERSA 248 Query: 241 IDTKPRGWTKPSDH 254 + + SDH Sbjct: 249 VVFDGKETPVVSDH 262 >gi|220933285|ref|YP_002512184.1| Endonuclease/exonuclease/phosphatase [Thioalkalivibrio sp. HL-EbGR7] gi|219994595|gb|ACL71197.1| Endonuclease/exonuclease/phosphatase [Thioalkalivibrio sp. HL-EbGR7] Length = 294 Score = 40.2 bits (92), Expect = 0.35, Method: Composition-based stats. Identities = 38/286 (13%), Positives = 80/286 (27%), Gaps = 65/286 (22%) Query: 4 VTVATWNVN-SIRA-RIHN---------------------LAAWIKENNPDIICLQETKT 40 + V ++NV I A R H+ +A +I + D++ LQE Sbjct: 40 IRVLSYNVQVGISATRFHHYFTNSWKHVLPYQGRLGNLDSVARFI--SGFDLVGLQE--L 95 Query: 41 EDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT 100 + + + + Y E + + + + L Sbjct: 96 DAGSLRSQFINLAQYLSERSDLPYWYSQTNRNLGKIAQHSLGLLSRYHPHTVVEHRLPSV 155 Query: 101 INTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP 160 I + + G+ + E + + Sbjct: 156 IPGRGALEAHFGAEQGSGSLVIMLVHLSLGKRDRRLQMEYIAE-------------VLRD 202 Query: 161 HDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYY-ADSWSKNK 219 H+ + N +C EV++ ++ R ++ + A ++ Sbjct: 203 HEHVVVMGDMNCSCHADEVKRLVRQT---------RLQEPLAAHKTYPSWRPAHAF---- 249 Query: 220 GIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 DHI+++P + + SDH PV V + +PE Sbjct: 250 ----DHILVTPGLG--VEQVHVYN-----VNYSDHLPVGVEIVVPE 284 >gi|147805881|emb|CAN76026.1| hypothetical protein VITISV_027817 [Vitis vinifera] Length = 1728 Score = 40.2 bits (92), Expect = 0.35, Method: Composition-based stats. Identities = 30/244 (12%), Positives = 71/244 (29%), Gaps = 30/244 (12%) Query: 18 IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPI 77 + ++ D++CL ETK +D + + GV + + Sbjct: 100 RKLIKGVVRNQKADLVCLLETKVKD---------------VSTQLVNSVGVGRFLNWASV 144 Query: 78 EIVTHLPGDDLDVQARFIEA-TFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 + G L R +E ++ + G + S + + Sbjct: 145 DARGTAGGLLLIWDNRVLENLEVESGGYSISVRFRNCSDG-------FSWIFSGVYGPVI 197 Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIR 196 + + EE G + +N + + + + ++ + +R Sbjct: 198 GSEKEDFWEELGAIRGLWEDPWCIGGDFNAVRYPEERRNAPRLTADMRRFSEVIGELGLR 257 Query: 197 ATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTP 256 +++ + R+D ++S + + PR SDH P Sbjct: 258 DIPLAGGPFTW----IGGLNSQAASRLDRFLISDQWEDHFSAISQSALPR---LVSDHXP 310 Query: 257 VIVS 260 +I+ Sbjct: 311 IILE 314 >gi|327313721|ref|YP_004329158.1| endonuclease/exonuclease/phosphatase family protein [Prevotella denticola F0289] gi|326945022|gb|AEA20907.1| endonuclease/exonuclease/phosphatase family protein [Prevotella denticola F0289] Length = 371 Score = 40.2 bits (92), Expect = 0.35, Method: Composition-based stats. Identities = 26/256 (10%), Positives = 57/256 (22%), Gaps = 44/256 (17%) Query: 30 PDIICLQETKTEDKNFPFET-----LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLP 84 PDI+ L E E+ + F+ L+ Y G+ + Y P Sbjct: 129 PDIVGLCEV--ENDSVLFDLTRRSLLRKARYEYVMTASDDRRGIDVALLYSPFSFRLIKA 186 Query: 85 GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL 144 + T + + +G+ + + Sbjct: 187 DTIHVAPMADMRPTRD-----ILHVEGEIENGDTLHVFLLHAPSRMGGERYSRPFRLYVA 241 Query: 145 EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL 204 + + + A + + + + Sbjct: 242 GLLCQAVDSLRSLYADPRILVMGDFNDYADS--PSVRLLCTRGFVNVSARAHGNNGAKGT 299 Query: 205 YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKP------------------- 245 Y + +W +D I++S + S + Sbjct: 300 YRY----HGAWGS-----LDQILVSENLCPWVISCHVHDAAFLLEEDDKYGGVKPRRNYN 350 Query: 246 --RGWTKPSDHTPVIV 259 R SDH P+++ Sbjct: 351 GMRYNNGFSDHLPLVL 366 >gi|288904371|ref|YP_003429592.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus gallolyticus UCN34] gi|306830403|ref|ZP_07463573.1| RgfB protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325977367|ref|YP_004287083.1| endonuclease/exonuclease/phosphatase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] gi|288731096|emb|CBI12642.1| putative endonuclease/exonuclease/phosphatase family protein [Streptococcus gallolyticus UCN34] gi|304427428|gb|EFM30530.1| RgfB protein [Streptococcus gallolyticus subsp. gallolyticus TX20005] gi|325177295|emb|CBZ47339.1| Endonuclease/exonuclease/phosphatase [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069] Length = 271 Score = 40.2 bits (92), Expect = 0.35, Method: Composition-based stats. Identities = 43/276 (15%), Positives = 81/276 (29%), Gaps = 26/276 (9%) Query: 5 TVATWN------VNSIRARIHNLAAWIKENNPDIICLQE---------TKTED--KNFPF 47 T N NS++ ++ +LA I N D+ICLQE TK D + P Sbjct: 3 KFLTLNTHSWLEANSLK-KLFDLAETIYSENYDVICLQEINQDIRGLLTKEVDGYEKLPG 61 Query: 48 E-TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 L NY ++ G + I + + + ++ I + Sbjct: 62 SPALHRDNYALQLVNYLRSQGRYYYWSWAYNHIGYEKYNEGVVILSKTPIKVNDILVSDV 121 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 + + T+ D K + + E P+P Sbjct: 122 DDETDFHTRRVLVAETEIDQKPITVVSLHMSWFGKGFESEWQKLETALLDYPKPLVLMGD 181 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226 D + S LQ+ ++ + + +++DH+ Sbjct: 182 FNNPTDTAGYDMILNSPLDLQDSHKVAK-----KVQGDHTIIEDIDGWEGNKQSLKVDHV 236 Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 S + + S+ + SDH + V L+ Sbjct: 237 FTSKDID--ILSSTVTFDGGEAPIVSDHFGLAVELN 270 >gi|156254839|gb|ABU62831.1| Zorro3 ORF2 protein [Expression vector pPZ3TA] gi|183240792|gb|ACC61187.1| unknown [synthetic construct] Length = 1149 Score = 40.2 bits (92), Expect = 0.35, Method: Composition-based stats. Identities = 31/232 (13%), Positives = 69/232 (29%), Gaps = 12/232 (5%) Query: 18 IHNLAAWIKENN-PDIICLQETK-TEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75 + I E++ DI +QE + + F + + L H + + + Sbjct: 30 LDIFLKLIGEHSMIDIWFIQEIRFVSQEQFNY-INKILKQHNAQLRMHHFEDLTGFLIHS 88 Query: 76 PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135 P + D+ + E +I TL N + S D +++ +K F+ Sbjct: 89 PHAKLKFKIRDNDNHHTTHFEGRISILDITLITNEDITLINNYLHSGNMDAQMTLLKAFI 148 Query: 136 RFASQRLELEEPLIFAG---DYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192 ++ + + I G ++ + + + E+ Q Sbjct: 149 KYIANLKKHTNHNIIYGGDYNHIMSLDDVQLPSDQTRYIISKKESEIIQLMSNFYKKWKL 208 Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK 244 + +F + R+D I + L + RI + Sbjct: 209 QDAFQIRNNLQPTNFHSNKSVKK------RLDRIYIDSRIRRKLRNCRILEE 254 >gi|297581461|ref|ZP_06943384.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|297534299|gb|EFH73137.1| conserved hypothetical protein [Vibrio cholerae RC385] Length = 869 Score = 40.2 bits (92), Expect = 0.35, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 24/76 (31%) Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSA---RI-----------------DTKPRG 247 W Y S++ G +DH+++SP + A I K + Sbjct: 775 WSY---SFNDEVGA-LDHLLISPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKD 830 Query: 248 WTKPSDHTPVIVSLDI 263 + SDH P ++ L+I Sbjct: 831 QFRASDHDPAVLELNI 846 >gi|302338290|ref|YP_003803496.1| endonuclease/exonuclease/phosphatase [Spirochaeta smaragdinae DSM 11293] gi|301635475|gb|ADK80902.1| Endonuclease/exonuclease/phosphatase [Spirochaeta smaragdinae DSM 11293] Length = 250 Score = 40.2 bits (92), Expect = 0.36, Method: Composition-based stats. Identities = 40/247 (16%), Positives = 67/247 (27%), Gaps = 29/247 (11%) Query: 21 LAAWIKENNPDIICLQETKTE-----DKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75 L ++ NPDI C QE + E D+ PF +++ Y + + Sbjct: 27 LEDFLVRFNPDICCFQEIREETMRFLDEAMPFHARVEDDFNGWRNEGNIYYRKDLFRETG 86 Query: 76 PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135 E+ +P D + +E + +L + T + + Sbjct: 87 HTELFLDMPEPDRRLFILDLECLADGRKFQVCTVHLTHQNNRDEQDTGTSYRHEEALKIA 146 Query: 136 RFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAI 195 R+ R PL+ GD+N P E+ Sbjct: 147 RWLKNRKSDAPPLLLCGDFNDPWHPSRILAE---AGLNDVFYELGLLQPPTFPNPALSEE 203 Query: 196 RATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHT 255 ++T ID IM +L S SDH Sbjct: 204 IYMNET---------------------IDRIMYGGGPLPVLASVVDFHGSGASCGVSDHK 242 Query: 256 PVIVSLD 262 PV+ + Sbjct: 243 PVVAVFE 249 >gi|169787490|gb|ACA80184.1| putative DNA lyase [Colletotrichum sublineolum] Length = 233 Score = 40.2 bits (92), Expect = 0.36, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 21/57 (36%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81 + DI+ +QETK + K+ + + + + K G + + Y Sbjct: 2 FETLEADIVVMQETKIQRKDLRDDMVLVPGWDVVFSLPKHKKGYSGVVIYTRNATCC 58 >gi|169787244|gb|ACA80061.1| putative DNA lyase [Colletotrichum sublineolum] gi|169787290|gb|ACA80084.1| putative DNA lyase [Colletotrichum sublineolum] gi|169787486|gb|ACA80182.1| putative DNA lyase [Colletotrichum sublineolum] Length = 233 Score = 40.2 bits (92), Expect = 0.36, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 21/57 (36%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81 + DI+ +QETK + K+ + + + + K G + + Y Sbjct: 2 FETLEADIVVMQETKIQRKDLRDDMVLVPGWDVVFSLPKHKKGYSGVVIYTRNATCC 58 >gi|169787240|gb|ACA80059.1| putative DNA lyase [Glomerella tucumanensis] gi|169787246|gb|ACA80062.1| putative DNA lyase [Colletotrichum sublineolum] gi|169787292|gb|ACA80085.1| putative DNA lyase [Colletotrichum sublineolum] gi|169787482|gb|ACA80180.1| putative DNA lyase [Colletotrichum sublineolum] gi|169787484|gb|ACA80181.1| putative DNA lyase [Colletotrichum sublineolum] Length = 233 Score = 40.2 bits (92), Expect = 0.36, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 21/57 (36%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81 + DI+ +QETK + K+ + + + + K G + + Y Sbjct: 2 FETLEADIVVMQETKIQRKDLRDDMVLVPGWDVVFSLPKHKKGYSGVVIYTRNATCC 58 >gi|169787214|gb|ACA80046.1| putative DNA lyase [Glomerella tucumanensis] Length = 233 Score = 40.2 bits (92), Expect = 0.36, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 21/57 (36%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81 + DI+ +QETK + K+ + + + + K G + + Y Sbjct: 2 FETLEADIVVMQETKIQRKDLRDDMVLVPGWDVVFSLPKHKKGYSGVVIYTRNATCC 58 >gi|158312783|ref|YP_001505291.1| endonuclease/exonuclease/phosphatase [Frankia sp. EAN1pec] gi|158108188|gb|ABW10385.1| Endonuclease/exonuclease/phosphatase [Frankia sp. EAN1pec] Length = 259 Score = 40.2 bits (92), Expect = 0.36, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 21/41 (51%), Gaps = 6/41 (14%) Query: 4 VTVATWNV-NSI-----RARIHNLAAWIKENNPDIICLQET 38 + V ++NV + + R + AA + + + D++ LQE Sbjct: 1 MRVGSFNVMHGLSLADGRVEVDRFAAAVADLDCDVLGLQEV 41 >gi|156335524|ref|XP_001619610.1| hypothetical protein NEMVEDRAFT_v1g150827 [Nematostella vectensis] gi|156203139|gb|EDO27510.1| predicted protein [Nematostella vectensis] Length = 113 Score = 40.2 bits (92), Expect = 0.36, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 3/56 (5%) Query: 6 VATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59 + + N + +R+ R + ++ N DII LQET D+ + L+ N I Sbjct: 4 LVSINSHGLRSQDRRATAFSLLRRNRYDIILLQETHWTDE-IQDDILREWNGDIYF 58 >gi|118361191|ref|XP_001013826.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena thermophila] gi|89295593|gb|EAR93581.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena thermophila SB210] Length = 276 Score = 40.2 bits (92), Expect = 0.36, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 6/40 (15%) Query: 4 VTVATWNV-----NSIRARIHNLAAWIKENNPDIICLQET 38 + ++NV N + R L +++PD ICLQE Sbjct: 38 LKFISYNVWFDQFNFV-ERNQELRKLFLKHDPDFICLQEV 76 >gi|68491768|ref|XP_710326.1| polyprotein of L1-like non-LTR retrotransposon Zorro 3 [Candida albicans SC5314] gi|68491785|ref|XP_710318.1| polyprotein of L1-like non-LTR retrotransposon Zorro 3 [Candida albicans SC5314] gi|46431502|gb|EAK91055.1| polyprotein of L1-like non-LTR retrotransposon Zorro 3 [Candida albicans SC5314] gi|46431511|gb|EAK91063.1| polyprotein of L1-like non-LTR retrotransposon Zorro 3 [Candida albicans SC5314] Length = 1149 Score = 40.2 bits (92), Expect = 0.36, Method: Composition-based stats. Identities = 31/232 (13%), Positives = 69/232 (29%), Gaps = 12/232 (5%) Query: 18 IHNLAAWIKENN-PDIICLQETK-TEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75 + I E++ DI +QE + + F + + L H + + + Sbjct: 30 LDIFLKLIGEHSMIDIWFIQEIRFVSQEQFNY-INKILKQHNAQLRMHHFEDLTGFLIHS 88 Query: 76 PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135 P + D+ + E +I TL N + S D +++ +K F+ Sbjct: 89 PHAKLKFKIRDNDNHHTTHFEGRISILDITLITNEDITLINNYLHSGNMDAQMTLLKAFI 148 Query: 136 RFASQRLELEEPLIFAG---DYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192 ++ + + I G ++ + + + E+ Q Sbjct: 149 KYIANLKKHTNHNIIYGGDYNHIMSLDDVQLPSDQTRYIISKKESEIIQLMSNFYKKWKL 208 Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK 244 + +F + R+D I + L + RI + Sbjct: 209 QDAFQIRNNLQPTNFHSNKSVKK------RLDRIYIDSRIRRKLRNCRILEE 254 >gi|324991280|gb|EGC23213.1| RgfB protein [Streptococcus sanguinis SK353] Length = 271 Score = 40.2 bits (92), Expect = 0.36, Method: Composition-based stats. Identities = 29/250 (11%), Positives = 69/250 (27%), Gaps = 21/250 (8%) Query: 18 IHNLAAWIKENNPDIICLQETK--TEDKNFPFETLQSLNYHIETCGQKSYNGVAILS--- 72 ++ LA I + D+ICLQE TE + Y + + L Sbjct: 21 LNQLAERILQEKYDVICLQEVNQLTESEQVVQAPF----YQAVEGAIEIHQDHFALCLVE 76 Query: 73 ------KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDD 126 + G D+ + I + + + + + + P + Sbjct: 77 KLAEAGLDYHWSWAYNHIGFDIYNEGVAILSRKPLTPREVLVSEVNDPRDYHTRKVLLAE 136 Query: 127 KISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL 186 + + ++ G++ + + +Q +Q + Sbjct: 137 TEVEGQLLTIASCHLSWWDKGFQ--GEWAKLEAELLKAESPLVLMGDFNNPVGQQGYQTI 194 Query: 187 QN--MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK 244 + D+ A + + A ++ID++ S + + + Sbjct: 195 LASPLKLQDSHIAAKEIVGEATVEGTIAGWDDNKHALKIDYVFTSQGM--NIERSAVVFD 252 Query: 245 PRGWTKPSDH 254 + SDH Sbjct: 253 GKETPVVSDH 262 >gi|315502378|ref|YP_004081265.1| endonuclease/exonuclease/phosphatase [Micromonospora sp. L5] gi|315408997|gb|ADU07114.1| Endonuclease/exonuclease/phosphatase [Micromonospora sp. L5] Length = 675 Score = 40.2 bits (92), Expect = 0.36, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 7/42 (16%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 IDH+ +SP + + PR T+ SDH PV +++ +P Sbjct: 641 IDHVFVSPGL----TAGEV-RAPR--TEASDHLPVTLTVTLP 675 >gi|269119815|ref|YP_003307992.1| endonuclease/exonuclease/phosphatase [Sebaldella termitidis ATCC 33386] gi|268613693|gb|ACZ08061.1| Endonuclease/exonuclease/phosphatase [Sebaldella termitidis ATCC 33386] Length = 244 Score = 40.2 bits (92), Expect = 0.36, Method: Composition-based stats. Identities = 33/255 (12%), Positives = 68/255 (26%), Gaps = 58/255 (22%) Query: 19 HNLAAWIKENNPDIICLQET-----KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSK 73 + ++K+ PD++ L E +T KN + L ++ + S N + Sbjct: 35 DKIGDFLKKYKPDVVGLVEVDLGSYRTRRKNQATFLGKQLGHYGIYEHKYSQNSSLMKVP 94 Query: 74 YQPIEIVTHLPG------DDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDK 127 + L G + + T+ I ++L G T+ Sbjct: 95 VLRRQGNAFLSGLQVEGQKFHYFNNGMKKLVIELETKDFSIFLIHLALG---AKTRLKQI 151 Query: 128 ISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQ 187 + + + + +F G+ I + Sbjct: 152 VELYEVIDSCTKPFIIAGDFNLFWGEEEIELFLRALNLKNANIKNIPTYP---------- 201 Query: 188 NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRG 247 S+ K +D I+ S ++ ++ T R Sbjct: 202 ------------------SW-------KPKKV---LDFIIYSEGI--KINDFKVLTDVR- 230 Query: 248 WTKPSDHTPVIVSLD 262 SDH P+ V + Sbjct: 231 ---LSDHLPLYVDFE 242 >gi|14286189|gb|AAF73434.2|AF254443_1 reverse transcriptase [Candida albicans] Length = 1149 Score = 40.2 bits (92), Expect = 0.36, Method: Composition-based stats. Identities = 31/232 (13%), Positives = 69/232 (29%), Gaps = 12/232 (5%) Query: 18 IHNLAAWIKENN-PDIICLQETK-TEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75 + I E++ DI +QE + + F + + L H + + + Sbjct: 30 LDIFLKLIGEHSMIDIWFIQEIRFVSQEQFNY-INKILKQHNAQLRMHHFEDLTGFLIHS 88 Query: 76 PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135 P + D+ + E +I TL N + S D +++ +K F+ Sbjct: 89 PHAKLKFKIRDNDNHHTTHFEGRISILDITLITNEDITLINNYLHSGNMDAQMTLLKAFI 148 Query: 136 RFASQRLELEEPLIFAG---DYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192 ++ + + I G ++ + + + E+ Q Sbjct: 149 KYIANLKKHTNHNIIYGGDYNHIMSLDDVQLPSDQTRYIISKKESEIIQLMSNFYKKWKL 208 Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK 244 + +F + R+D I + L + RI + Sbjct: 209 QDAFQIRNNLQPTNFHSNKSVKK------RLDRIYIDSRIRRKLRNCRILEE 254 >gi|146413308|ref|XP_001482625.1| hypothetical protein PGUG_05645 [Meyerozyma guilliermondii ATCC 6260] Length = 308 Score = 40.2 bits (92), Expect = 0.37, Method: Composition-based stats. Identities = 40/261 (15%), Positives = 83/261 (31%), Gaps = 28/261 (10%) Query: 14 IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVA---- 69 + +RIH+ P ++ LQE K N + L LN +T ++ GV Sbjct: 66 LNSRIHDF--------PTLVGLQELK---HNQLVDVLAGLNGQNQTEFPWAHYGVGRDDG 114 Query: 70 ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKIS 129 + + L D L+ +++ T + + G+ + + + K++ Sbjct: 115 VEKGEYSAILYNTLEWDLLNGTYKWLSPTPDVPSYGWDAGSRRIVTMTTFRNKQTGTKVN 174 Query: 130 WIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNM 189 + L S++ E + G +IP + + + + A + Sbjct: 175 YFNTHLDNKSEQSRQESTKLIVGWLQLIPNDYPQFLLGDFNSIASDIAYETVADYMADTN 234 Query: 190 GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML-SPEATSL----LHSARIDTK 244 + + Y+ ++Y + ID I S + + + Sbjct: 235 VIANIHETGN--ETTYTGFEY------GDHQSVIDFIWAPSNSNKPKSGVEVVGYEVLSN 286 Query: 245 PRGWTKPSDHTPVIVSLDIPE 265 + SDH PV I Sbjct: 287 NYLDFRFSDHRPVTSHFRISS 307 >gi|83815332|ref|YP_444975.1| endonuclease/exonuclease/phosphatase family protein [Salinibacter ruber DSM 13855] gi|83756726|gb|ABC44839.1| endonuclease/exonuclease/phosphatase family [Salinibacter ruber DSM 13855] Length = 386 Score = 40.2 bits (92), Expect = 0.37, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 5/44 (11%) Query: 220 GIRIDHIMLSPEATSLLHSARIDTKP--RGWTKP-SDHTPVIVS 260 G RID+++ P AT + A + R P SDH PV V Sbjct: 340 GARIDYVL--PAATVAVDDAGVWRPAPARVPDVPVSDHFPVWVD 381 >gi|156396904|ref|XP_001637632.1| predicted protein [Nematostella vectensis] gi|156224746|gb|EDO45569.1| predicted protein [Nematostella vectensis] Length = 119 Score = 40.2 bits (92), Expect = 0.37, Method: Composition-based stats. Identities = 19/128 (14%), Positives = 39/128 (30%), Gaps = 9/128 (7%) Query: 149 IFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFW 208 ++ E L + T + H ++ Sbjct: 1 DMNAKVGDQNWDYERVMGKHGLGVRNDNGERLCELCDLDELVITATLFPHRTIHKA-TWI 59 Query: 209 DYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268 D +KN+ IDH++++ + + R+ R SDH V ++ I + Sbjct: 60 S--PDGKTKNQ---IDHVLVNKRFRNSVKDTRVF---RSSDVGSDHYLVCATVKIRLRKV 111 Query: 269 KQQDSTSQ 276 + TS+ Sbjct: 112 QNGRVTSE 119 >gi|329963050|ref|ZP_08300830.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides fluxus YIT 12057] gi|328529091|gb|EGF56021.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides fluxus YIT 12057] Length = 287 Score = 40.2 bits (92), Expect = 0.37, Method: Composition-based stats. Identities = 31/269 (11%), Positives = 74/269 (27%), Gaps = 24/269 (8%) Query: 6 VATWNV------NSI---RARIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNY 55 V ++N+ +S+ + R A I+ + DI+ QE + ++ + L Sbjct: 31 VMSFNIRYDNPEDSLDNWKYRKDRAANAIRFYDVDILGTQEVLHNQLEDL-KQRLPEYGV 89 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 G Y+ G + + + + RI + Sbjct: 90 IGVGREDGKEKGEYSALWYKKERFNLLDSGYFWLSETPEVAGSKGWDGACERIASWAKLQ 149 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + + L E + N + + ++ Sbjct: 150 DKASGKEFFA-----LNTHLDHVGVVARREGISLILDRINALSDGLPVIVTGDFNSEPES 204 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR--IDHIMLSPEAT 233 + + + +SF D+ + K R ID++ + Sbjct: 205 DVIKHVTDPSNPEHLTDARQASPIVYGPAWSFHDFGKIPYDK----RPLIDYVFVRNRL- 259 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + + + SDH P++V+++ Sbjct: 260 -KVLRYGVLAETEENAFLSDHAPILVTVE 287 >gi|296444974|ref|ZP_06886936.1| Endonuclease/exonuclease/phosphatase [Methylosinus trichosporium OB3b] gi|296257642|gb|EFH04707.1| Endonuclease/exonuclease/phosphatase [Methylosinus trichosporium OB3b] Length = 325 Score = 40.2 bits (92), Expect = 0.37, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 19/53 (35%), Gaps = 9/53 (16%) Query: 218 NKGIR--IDHIMLSPEATSLLHSARIDTKPRGWTK-------PSDHTPVIVSL 261 + G R +DHI++S + I + S H P++ S Sbjct: 263 HAGRRTLLDHILVSRALAARCARVEIMNEGLADEATAPDPILGSLHAPIMASF 315 >gi|260425583|ref|ZP_05779563.1| endonuclease/exonuclease/phosphatase [Citreicella sp. SE45] gi|260423523|gb|EEX16773.1| endonuclease/exonuclease/phosphatase [Citreicella sp. SE45] Length = 225 Score = 40.2 bits (92), Expect = 0.37, Method: Composition-based stats. Identities = 28/269 (10%), Positives = 65/269 (24%), Gaps = 58/269 (21%) Query: 4 VTVATWNVN---SI-RARIH-NLAAWIKENNPDIICLQE--TKT--EDKNFPFETLQ-SL 53 + VA++N+ + R R + + D++ LQE + P ++ Sbjct: 3 LKVASYNIRKAMGLDRRRDPARILKVLNRIGADVVMLQEADLRLGPRPTAIPRFLIEQET 62 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 +Y + S N V+I + + L + + + Sbjct: 63 DYEVA---DVSVNDVSIGWHGNAMLVRKGLQRGGVRRLELPGLEPRGAVLVEVEGISFVG 119 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 H + + + + + + ++ P +D + + Sbjct: 120 AHLGLMRRFRLLQMTAIREHLSGIETTAFIAGDFNEWSDVRGYEPWENDFKLVLPGRSYH 179 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 D ++ +RI Sbjct: 180 AARPVAAL-------------------------------DGFAYGNALRI---------- 198 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + + SDH P+ LD Sbjct: 199 ---ERMGVMREGPARV-ASDHLPIWAELD 223 >gi|157736673|ref|YP_001489356.1| hypothetical protein Abu_0412 [Arcobacter butzleri RM4018] gi|157698527|gb|ABV66687.1| conserved hypothetical protein [Arcobacter butzleri RM4018] Length = 313 Score = 40.2 bits (92), Expect = 0.37, Method: Composition-based stats. Identities = 45/286 (15%), Positives = 76/286 (26%), Gaps = 52/286 (18%) Query: 22 AAWIKEN----NPDIICLQETKTEDK--NFPFETLQSLNYHIETCGQKSYNG-------V 68 AW K N DI+ QE + D+ N E ++ N V Sbjct: 36 IAWCKNQLNLMNCDIVGFQEVFSNDELKNLCLEVGFKYFEVVDFAKVDKKNEKVYISTTV 95 Query: 69 AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKI 128 AI SK+ I I + N + + + +L K Sbjct: 96 AIASKFPIINIEKIDTKSFKFARIPIKAIISLPNEKNITVYITHLKSNRENEFEYIFTKN 155 Query: 129 SWIKRFLRFASQRLELEEPLIFAGDYN----------------IIPQPHDCYNP------ 166 ++ L+ L+ L N I+ + Sbjct: 156 DTLEDKLKKVEVALKDNYSLSLKQRINEAKILFYDIKSNKTPTILMCDLNDKEFSITIDA 215 Query: 167 ----IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR 222 + + + L + + Y+A KG Sbjct: 216 LTNKRFYNKNLKKDDYLLFDAYYLHKPKIYNPHPEFKGIKRTPT--SYFAG-----KGNI 268 Query: 223 IDHIMLSPEATSLLHSARIDTKPR-----GWTKPSDHTPVIVSLDI 263 +D+I +S E + S + K G K SDH V+ ++I Sbjct: 269 LDYIFVSKEL-QKISSYEVFDKHLQKNHNGSLKQSDHAQVVCEIEI 313 >gi|225444482|ref|XP_002268030.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 413 Score = 40.2 bits (92), Expect = 0.37, Method: Composition-based stats. Identities = 38/294 (12%), Positives = 73/294 (24%), Gaps = 58/294 (19%) Query: 1 MSVVTVATWNVNSIR------ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 +S + + ++NV R R+ L I+ ++PD+IC QE Sbjct: 142 LSSLKILSYNVW-FREDLEMDKRMQALGDLIQLHSPDLICFQEV------------TPNI 188 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 Y + L + + + I L Sbjct: 189 YDVFQQSCW---WKVYRCSVPNEMAHLRPYFCMLLSKLPVKSFSCKRFSN--SIMGRELC 243 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 ++ + + D NP + Sbjct: 244 IAELEVQAGKPLVLATSHLESPCPAPPKWDQMYSKERVDQAKEALNLLTKNPNVIFGGDM 303 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI--RIDHIMLSPEA 232 E L + DA + +++ S N+ + R+D M Sbjct: 304 NWDEKSDGQFPLPDGWV-DAWADLRPGENGWTYDTKSNQMLSGNRTLQKRLDRFMC---- 358 Query: 233 TSLLHSARI------------------DTKPRGWTK-------PSDHTPVIVSL 261 LH +I + K R + PSDH +++++ Sbjct: 359 --RLHDFKISKIDMIGMEPIPGLSYCKEKKVRKEMQQLVLPVLPSDHYGLLLTI 410 >gi|147797602|emb|CAN78035.1| hypothetical protein VITISV_031077 [Vitis vinifera] Length = 844 Score = 40.2 bits (92), Expect = 0.37, Method: Composition-based stats. Identities = 21/228 (9%), Positives = 55/228 (24%), Gaps = 30/228 (13%) Query: 33 ICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQA 92 +C+QETK + + + + + Sbjct: 1 MCIQETKVQ-----------------CMTDSIARSIGSGRFLGWRAVNAEGASGGIFICW 43 Query: 93 RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG 152 + + + + + + + EE G Sbjct: 44 DRRALDMLDWEEGQFTLSCRFCNIEDGNVWVF----TGVYXPFTKVERNALWEEFGAIRG 99 Query: 153 DYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYA 212 + +N ++ + + + + + + +++ Sbjct: 100 LWEDPWCIGGDFNITLFSRERSGQRRISSAMRNFAEIVDDLGLVDLPLQGGDFTW----- 154 Query: 213 DSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 + N+ R+D M+SP PR SDH P+++ Sbjct: 155 NGGLHNQTWARLDRFMVSPSWIDQFSGINQCRLPR---PVSDHFPIML 199 >gi|46116288|ref|XP_384162.1| hypothetical protein FG03986.1 [Gibberella zeae PH-1] Length = 510 Score = 40.2 bits (92), Expect = 0.37, Method: Composition-based stats. Identities = 35/298 (11%), Positives = 79/298 (26%), Gaps = 47/298 (15%) Query: 1 MSVVTVATWNV-NS---IRARIHNLAAWIKENNPDIICLQETKTEDKN---FPFETLQSL 53 +S + V + N+ N + ++ D++ +QE D+ P +L Sbjct: 225 LSQLKVLSLNMWNGGTGVTNYHDKQIKFLASCGADVVGIQE----DQQGRHVPRLA-DAL 279 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 ++ S V ILSKY + G + Y Sbjct: 280 GWY----HWSSGGDVGILSKYPITADYGVISGPARSGGVKIALDGTNKEINFFVAHLGYT 335 Query: 114 PHGNPITSTKYD---------------DKISWIKRFLRFASQRLELEEPLIFAGDYNIIP 158 P+G T + ++ ++ + + Sbjct: 336 PYGPYDTCFDHYPVDKIIEREAQSGRTPQMKATLAGMKSQLDNADEIPTFLVGDFNAPSH 395 Query: 159 QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT---HHLYSF---WDYYA 212 + + + + G D+ R H ++ + + Sbjct: 396 LDYTEGLKDKNCGYSDIK---WPTSVLPEEAGLIDSFRVAHPDPVKEQGITWSPIYIWNG 452 Query: 213 DSWSKNKGIRIDHIM-------LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 RID ++ ++ T ++ + + SDH V+ + +I Sbjct: 453 GRRRPEPLDRIDFVLHKGKGLKVTDSQTVVVGEPKPQPNHKENEWFSDHRAVLTTYEI 510 >gi|156374024|ref|XP_001629609.1| predicted protein [Nematostella vectensis] gi|156216613|gb|EDO37546.1| predicted protein [Nematostella vectensis] Length = 271 Score = 40.2 bits (92), Expect = 0.38, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 43/124 (34%), Gaps = 4/124 (3%) Query: 4 VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + V T N S++ + + I PDI+ + ET D F E L+ Y Sbjct: 7 LRVLTLNACSLKGKDKRLEFQSLIDNYKPDIVNVNETHINDTVFSAEILEK-GY-TIFRK 64 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 ++ G +LS + +VTH D + + + + + P N Sbjct: 65 DRNEFGGGVLSAFSNHLVVTHEEQMDGNYEGIWSKINIAGSKSLFVGSVYRTPDSNVDPL 124 Query: 122 TKYD 125 D Sbjct: 125 VALD 128 >gi|170084023|ref|XP_001873235.1| predicted protein [Laccaria bicolor S238N-H82] gi|164650787|gb|EDR15027.1| predicted protein [Laccaria bicolor S238N-H82] Length = 476 Score = 40.2 bits (92), Expect = 0.38, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 28/72 (38%), Gaps = 18/72 (25%) Query: 4 VTVATWNV--------------NSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPF 47 + V TWN+ + ++A R L I +N DI+CLQE ++ P Sbjct: 57 IRVLTWNLLAQCLVRRQLFPASDCLKAGQREPVLHREILSHNADILCLQEVDRLEQLLP- 115 Query: 48 ETLQSLNYHIET 59 LQ Y Sbjct: 116 -VLQKAGYSHHF 126 >gi|168044587|ref|XP_001774762.1| predicted protein [Physcomitrella patens subsp. patens] gi|162673917|gb|EDQ60433.1| predicted protein [Physcomitrella patens subsp. patens] Length = 293 Score = 40.2 bits (92), Expect = 0.38, Method: Composition-based stats. Identities = 21/97 (21%), Positives = 30/97 (30%), Gaps = 21/97 (21%) Query: 4 VTVATWNV--NSI-------RARIHNLAAW----------IKENNPDIICLQETKTEDKN 44 + V WNV + + R W I +++P +ICLQE D Sbjct: 41 LRVMQWNVLADGLAQSGDFDR-VEKKFLEWNHRAPLLLGRILKDDPHVICLQELNHFDDF 99 Query: 45 FPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81 F E L+ Y E + S I Sbjct: 100 FLPE-LKRHGYVGEYWQKPCSAAQKFESPADGCAIFY 135 >gi|147803604|emb|CAN75353.1| hypothetical protein VITISV_030454 [Vitis vinifera] Length = 1101 Score = 40.2 bits (92), Expect = 0.38, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 23/59 (38%), Gaps = 7/59 (11%) Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 +YS+ + S R+D ++S + A PR SDH P+++ Sbjct: 212 QGGVYSW----SGGRSNQTWARLDRFLVSQGWLDIFRGAXQCRLPR---PTSDHFPILL 263 >gi|292609568|ref|XP_697426.2| PREDICTED: nocturnin-like isoform 2 [Danio rerio] Length = 378 Score = 39.8 bits (91), Expect = 0.39, Method: Composition-based stats. Identities = 35/264 (13%), Positives = 64/264 (24%), Gaps = 26/264 (9%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFE--TLQSLNYHIETCG--QKSYNGVAILSKYQP 76 + I PDI+CLQE D F L +L Y C V + Sbjct: 121 ILEEILTYKPDILCLQEV---DHYFDMFQPVLATLGYQSSFCPKPWSPCLDVENNNGPDG 177 Query: 77 IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK-----YDDKISWI 131 + + L + + T + I + Sbjct: 178 CALFFNHKRFQLVNTTHLRLSAMMLKTNQVAIVAALRCRSTGRVFCVGVTHLKARSGWEV 237 Query: 132 KRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191 R + + L + + + + L Sbjct: 238 LRSAQGSDLLRNLRNITQKIETEENAESAIPLIVCGDFNAEPSEDVYRNFATSSLGLDSA 297 Query: 192 TDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID--------- 242 + T Y+ W S + +D++ S A +A +D Sbjct: 298 YKLLSTDGKTEPPYTTWKIRPSGESCHT---LDYVWYSHRAFD--VNAVLDFPTAEQIGP 352 Query: 243 TKPRGWTKPSDHTPVIVSLDIPEP 266 + + PSDH ++ +P Sbjct: 353 NRLPSYNYPSDHLSLVCDFCFTDP 376 >gi|187924331|ref|YP_001895973.1| hypothetical protein Bphyt_2351 [Burkholderia phytofirmans PsJN] gi|187715525|gb|ACD16749.1| conserved hypothetical protein [Burkholderia phytofirmans PsJN] Length = 226 Score = 39.8 bits (91), Expect = 0.39, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 20/38 (52%), Gaps = 4/38 (10%) Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 D I ++ + TS + + +D ++ SDH P+ + L Sbjct: 192 DFIFVTEDLTSRIAACEVD----AVSEASDHQPMWLEL 225 >gi|308805745|ref|XP_003080184.1| Predicted Mg2+-dependent phosphodiesterase TTRAP (ISS) [Ostreococcus tauri] gi|116058644|emb|CAL54351.1| Predicted Mg2+-dependent phosphodiesterase TTRAP (ISS) [Ostreococcus tauri] Length = 387 Score = 39.8 bits (91), Expect = 0.39, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 10/42 (23%) Query: 4 VTVATWNV-------NSIRARIHNLAAWIKENNPDIICLQET 38 + + T+NV AR+ L I E +P ++CLQE Sbjct: 111 LRLLTYNVWFGDVAQA---ARLEALGKVIAECDPHVLCLQEV 149 >gi|68488901|ref|XP_711695.1| potential phospholipase C/sphingomyelinase Isc1p [Candida albicans SC5314] gi|46433016|gb|EAK92473.1| potential phospholipase C/sphingomyelinase Isc1p [Candida albicans SC5314] Length = 438 Score = 39.8 bits (91), Expect = 0.39, Method: Composition-based stats. Identities = 37/302 (12%), Positives = 84/302 (27%), Gaps = 38/302 (12%) Query: 4 VTVATWNVNSIR-------ARIHNLAAWIK-----ENNPDIICLQETKTEDKNFPFETLQ 51 + + T+N ++ R+ +A + + + DI+ LQE E+ + + Sbjct: 20 IKLLTFNTWGLKFISKHRKERLRAIADALANPKCPDEDYDIVALQEIWCEEDWQYLDLVC 79 Query: 52 SLNY---HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108 Y + G S G+A+LSK E + + A F + + + + Sbjct: 80 RPRYPYRRVFKAGIVSGPGLAVLSKISIAETFLYRFPINGRPSAFFRGDFYVGKSIAVTM 139 Query: 109 GN--------------LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDY 154 ++ + F + + +I GD Sbjct: 140 FQPHHPDILPIALLNSHMHAPYGSGDASYSTHRACQAWDFAKLVRMLKKAGYAVIQVGDL 199 Query: 155 NIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADS 214 N P + + + + T ++ + + Sbjct: 200 NSKPDSLPYKLFTVEGGLTDSWNVLNKDNVVPNDQIATLSLEDQISLAGV-TCNSRLNTW 258 Query: 215 WSKNKGI---RIDHIMLSPE----ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPR 267 R+D+ ++ ++ + P + SDH V L I Sbjct: 259 RESRPLWEACRLDYALIDASNITPVSAQVKFVDKLPPPLSCSY-SDHFAYSVDLVIRPKE 317 Query: 268 KK 269 ++ Sbjct: 318 ER 319 >gi|225445027|ref|XP_002280110.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1034 Score = 39.8 bits (91), Expect = 0.39, Method: Composition-based stats. Identities = 11/62 (17%), Positives = 22/62 (35%), Gaps = 11/62 (17%) Query: 201 THHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKP-SDHTPVI 258 +++ N+ R+D ++SP R +P SDH P++ Sbjct: 138 QGGAFTW-----SGGLNNQSWARLDRFLVSPSWLDKFSGV----NQRRLPRPVSDHFPIL 188 Query: 259 VS 260 + Sbjct: 189 LE 190 >gi|328856732|gb|EGG05852.1| hypothetical protein MELLADRAFT_107286 [Melampsora larici-populina 98AG31] Length = 419 Score = 39.8 bits (91), Expect = 0.40, Method: Composition-based stats. Identities = 18/69 (26%), Positives = 26/69 (37%), Gaps = 18/69 (26%) Query: 4 VTVATWNV--------N---S-----IRARIHNLAAWIKENNPDIICLQET-KTEDKNFP 46 + + TWNV N + R + I +PD+ICLQE + D P Sbjct: 35 IKIMTWNVLAQCLVKRNLFPGSDCLKWKERGKTITEEIINYDPDVICLQEVDRLTDHG-P 93 Query: 47 FETLQSLNY 55 T +Y Sbjct: 94 ILTKAGYDY 102 >gi|147856633|emb|CAN82456.1| hypothetical protein VITISV_010028 [Vitis vinifera] Length = 4128 Score = 39.8 bits (91), Expect = 0.40, Method: Composition-based stats. Identities = 30/244 (12%), Positives = 72/244 (29%), Gaps = 30/244 (12%) Query: 18 IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPI 77 + ++ D++CL ETK +D + + GV + + Sbjct: 2420 RKLIKGVVRNQKADLVCLLETKVKD---------------VSTQLVNSVGVGRFLNWASV 2464 Query: 78 EIVTHLPGDDLDVQARFIEA-TFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 + G L R +E ++ + G + S + + Sbjct: 2465 DARGTAGGLLLIWDNRVLENLEVESGGYSISVRFRNCSDG-------FSWIFSGVYGPVI 2517 Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIR 196 + + EE G + +N + + + + ++ + +R Sbjct: 2518 GSEKEDFWEELGAIRGLWEDPWCIGGDFNAVRYPEERRNAPRLTADMRRFSEVIGELGLR 2577 Query: 197 ATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTP 256 +++ + R+D ++S + + PR SDH+P Sbjct: 2578 DIPLAGGPFTW----IGGLNSQAASRLDRFLISDQWEDHFSAISQSALPR---LVSDHSP 2630 Query: 257 VIVS 260 +I+ Sbjct: 2631 IILE 2634 >gi|147778361|emb|CAN76280.1| hypothetical protein VITISV_013228 [Vitis vinifera] Length = 1821 Score = 39.8 bits (91), Expect = 0.40, Method: Composition-based stats. Identities = 15/167 (8%), Positives = 48/167 (28%), Gaps = 7/167 (4%) Query: 94 FIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGD 153 + + +G+ + + S + + +R EE Sbjct: 902 VMWDKRVLEGLEFEVGSFSISCRFRNCEEGFVWVFSGLYGPSKGRERRELWEELAAIKXL 961 Query: 154 YNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD 213 +N +N + + + ++ + ++ + + +++ Sbjct: 962 WNDPWCIAGDFNVVRFPAETSNGRQMSTAMREFSSFIDEFELVDPPLGGGAFTWIGGEGG 1021 Query: 214 SWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 + R+D + S + + A + SDH P+++ Sbjct: 1022 ALKA----RLDRFLFSGDWEERVTGAM---QCLLTRPVSDHCPILLD 1061 >gi|196000682|ref|XP_002110209.1| predicted protein [Trichoplax adhaerens] gi|190588333|gb|EDV28375.1| predicted protein [Trichoplax adhaerens] Length = 213 Score = 39.8 bits (91), Expect = 0.40, Method: Composition-based stats. Identities = 17/192 (8%), Positives = 47/192 (24%), Gaps = 11/192 (5%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSY 65 +ATWNV ++ A ++ + D++ LQE + + + + Sbjct: 5 LATWNV----SQSKGFAQFLHQQ--DVVVLQE--ANPA--SRKEITQAGFKFIVGQRSHC 54 Query: 66 NGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYD 125 I + + A + I + + Sbjct: 55 GETHIYVRQGMMAHPFGDEWPHGTACALID-DRWLICGVHWPPFKESKSLRSKCANWVMA 113 Query: 126 DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQK 185 + + + E + QP D + + + ++ ++ Sbjct: 114 KLRNHEYVVVAGDTNMRNDENVSELDDTFLTAGQPADHRFTMDGYENKGWWVDRPFKWKC 173 Query: 186 LQNMGFTDAIRA 197 + + Sbjct: 174 RYDRVYLRNNEW 185 >gi|255532422|ref|YP_003092794.1| endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM 2366] gi|255345406|gb|ACU04732.1| Endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM 2366] Length = 312 Score = 39.8 bits (91), Expect = 0.40, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 29/73 (39%), Gaps = 18/73 (24%) Query: 2 SVVTVATWNVN---------SIRARIHNLAAWIKENNPDIICLQETKTE--------DKN 44 + + V T+N++ I + +AA IK +PD++ LQE D+ Sbjct: 72 AKIKVMTYNIHIGNPPSKPAGI-VDLPAIAAVIKAQDPDLVALQEVDVNTNRSGTSLDEA 130 Query: 45 FPFETLQSLNYHI 57 L +NY Sbjct: 131 KELARLTGMNYFY 143 >gi|116203539|ref|XP_001227580.1| hypothetical protein CHGG_09653 [Chaetomium globosum CBS 148.51] gi|88175781|gb|EAQ83249.1| hypothetical protein CHGG_09653 [Chaetomium globosum CBS 148.51] Length = 1641 Score = 39.8 bits (91), Expect = 0.40, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 13/40 (32%), Gaps = 4/40 (10%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 ID ++ S E L I SDH + D Sbjct: 620 IDLVLASAELADQLLRCTIHP----CDHGSDHRAIETDFD 655 >gi|116197451|ref|XP_001224537.1| hypothetical protein CHGG_06881 [Chaetomium globosum CBS 148.51] gi|88178160|gb|EAQ85628.1| hypothetical protein CHGG_06881 [Chaetomium globosum CBS 148.51] Length = 1206 Score = 39.8 bits (91), Expect = 0.40, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 13/40 (32%), Gaps = 4/40 (10%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 ID ++ S E L I SDH + D Sbjct: 616 IDLVLASAELADQLLRCTIHP----CDHGSDHRAIETDFD 651 >gi|147779794|emb|CAN62294.1| hypothetical protein VITISV_019972 [Vitis vinifera] Length = 1851 Score = 39.8 bits (91), Expect = 0.41, Method: Composition-based stats. Identities = 20/169 (11%), Positives = 43/169 (25%), Gaps = 24/169 (14%) Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------ 161 + + + +S + + + + F + Sbjct: 812 LICWDKRSLEIVDWEEGQYSLSCRFKNVEDGAVWVFTGVYGPFTKEERGCLWEELGAVRG 871 Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHD---------THHLYSFWDYYA 212 P D TL R+ + + D ++++ Sbjct: 872 IWDEPWCLGGDFNSTLYQRERSHQGRITPIMRRFAHIIDDLGLVDLPLQGGVFTW----- 926 Query: 213 DSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 N+ R+D ++SP S I R SDH P+++ Sbjct: 927 SGGLNNQSWARLDRFLVSPSWLDKF-SGMIQR--RLPRPVSDHFPILLE 972 >gi|281341983|gb|EFB17567.1| hypothetical protein PANDA_018075 [Ailuropoda melanoleuca] Length = 123 Score = 39.8 bits (91), Expect = 0.41, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 37/110 (33%), Gaps = 12/110 (10%) Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 E R L M D R H Y F+ ++S RIDHI+ Sbjct: 14 KQKSNKETRALNDMLDQMDLIDIYRTLHPRTTEYIFFSNAQGTFS-----RIDHILGHKI 68 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 + I +DH+ + L+ + K ++S + ++ I Sbjct: 69 GLNRYQKTEIIPCI-----FTDHS--TLKLECNDKEKFGRNSNTWKLRTI 111 >gi|169787320|gb|ACA80099.1| putative DNA lyase [Colletotrichum eleusines] Length = 233 Score = 39.8 bits (91), Expect = 0.41, Method: Composition-based stats. Identities = 10/61 (16%), Positives = 24/61 (39%), Gaps = 3/61 (4%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80 + ++ DI+ +QETK + K+ + + + + K G + ++ Y Sbjct: 1 MFDILE---ADIVVMQETKIQRKDLHDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATC 57 Query: 81 T 81 Sbjct: 58 C 58 >gi|167923106|ref|ZP_02510197.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei BCC215] Length = 296 Score = 39.8 bits (91), Expect = 0.41, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 17/46 (36%) Query: 4 VTVATWNVNSIRARIHNLAAW-----------IKENNPDIICLQET 38 + +AT+N++ L AW + E D+I LQE Sbjct: 11 LRIATYNIHG------GLGAWTASAAERIAVVLDELCADVIALQEV 50 >gi|167898570|ref|ZP_02485971.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 7894] Length = 299 Score = 39.8 bits (91), Expect = 0.41, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 17/46 (36%) Query: 4 VTVATWNVNSIRARIHNLAAW-----------IKENNPDIICLQET 38 + +AT+N++ L AW + E D+I LQE Sbjct: 14 LRIATYNIHG------GLGAWTASAAERIAVVLDELCADVIALQEV 53 >gi|167851455|ref|ZP_02476963.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei B7210] Length = 290 Score = 39.8 bits (91), Expect = 0.41, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 17/46 (36%) Query: 4 VTVATWNVNSIRARIHNLAAW-----------IKENNPDIICLQET 38 + +AT+N++ L AW + E D+I LQE Sbjct: 5 LRIATYNIHG------GLGAWTASAAERIAVVLDELCADVIALQEV 44 >gi|167742958|ref|ZP_02415732.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 14] Length = 292 Score = 39.8 bits (91), Expect = 0.41, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 17/46 (36%) Query: 4 VTVATWNVNSIRARIHNLAAW-----------IKENNPDIICLQET 38 + +AT+N++ L AW + E D+I LQE Sbjct: 7 LRIATYNIHG------GLGAWTASAAERIAVVLDELCADVIALQEV 46 >gi|168031621|ref|XP_001768319.1| predicted protein [Physcomitrella patens subsp. patens] gi|162680497|gb|EDQ66933.1| predicted protein [Physcomitrella patens subsp. patens] Length = 256 Score = 39.8 bits (91), Expect = 0.41, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 22/60 (36%), Gaps = 5/60 (8%) Query: 202 HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 ++ WD N RID L+PE + I R SDH P+ + L Sbjct: 115 QKHFT-WDNRRHP-PANICTRIDRAYLNPELIDMGGHVGIW---RILLNISDHAPIFIKL 169 >gi|217425444|ref|ZP_03456938.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 576] gi|254265260|ref|ZP_04956125.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1710a] gi|217391695|gb|EEC31723.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 576] gi|254216262|gb|EET05647.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1710a] Length = 338 Score = 39.8 bits (91), Expect = 0.41, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 17/46 (36%) Query: 4 VTVATWNVNSIRARIHNLAAW-----------IKENNPDIICLQET 38 + +AT+N++ L AW + E D+I LQE Sbjct: 53 LRIATYNIHG------GLGAWTASAAERIAVVLDELCADVIALQEV 92 >gi|147770314|emb|CAN73640.1| hypothetical protein VITISV_043180 [Vitis vinifera] Length = 719 Score = 39.8 bits (91), Expect = 0.41, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 22/59 (37%), Gaps = 9/59 (15%) Query: 201 THHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVI 258 +++ + N+ R+D ++SP T+ R SDH P+I Sbjct: 638 QGGEFTW-----NGGHNNQAWARLDKFLVSPSWLDQFSGI---TQSRLPRPISDHFPII 688 >gi|119938530|ref|XP_001257096.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like, partial [Bos taurus] Length = 82 Score = 39.8 bits (91), Expect = 0.41, Method: Composition-based stats. Identities = 6/19 (31%), Positives = 12/19 (63%) Query: 2 SVVTVATWNVNSIRARIHN 20 + + + +WNV+ +RA I Sbjct: 60 ATLKICSWNVDGLRAWIKK 78 >gi|76818411|ref|YP_335567.1| putative endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1710b] gi|76582884|gb|ABA52358.1| putative Endonuclease/Exonuclease/phosphatase family protein [Burkholderia pseudomallei 1710b] Length = 1153 Score = 39.8 bits (91), Expect = 0.41, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 17/46 (36%) Query: 4 VTVATWNVNSIRARIHNLAAW-----------IKENNPDIICLQET 38 + +AT+N++ L AW + E D+I LQE Sbjct: 868 LRIATYNIHG------GLGAWTASAAERIAVVLDELCADVIALQEV 907 >gi|126457011|ref|YP_001075914.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1106a] gi|242313530|ref|ZP_04812547.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1106b] gi|254194220|ref|ZP_04900652.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei S13] gi|126230779|gb|ABN94192.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1106a] gi|169650971|gb|EDS83664.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei S13] gi|242136769|gb|EES23172.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia pseudomallei 1106b] Length = 338 Score = 39.8 bits (91), Expect = 0.41, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 17/46 (36%) Query: 4 VTVATWNVNSIRARIHNLAAW-----------IKENNPDIICLQET 38 + +AT+N++ L AW + E D+I LQE Sbjct: 53 LRIATYNIHG------GLGAWTASAAERIAVVLDELCADVIALQEV 92 >gi|325687143|gb|EGD29166.1| RgfB protein [Streptococcus sanguinis SK72] Length = 271 Score = 39.8 bits (91), Expect = 0.42, Method: Composition-based stats. Identities = 27/254 (10%), Positives = 63/254 (24%), Gaps = 29/254 (11%) Query: 18 IHNLAAWIKENNPDIICLQETK--TEDKNFPFETLQSLNYHIETCGQKSYNGVAILS--- 72 ++ L I + D+ICLQE TE + Y + + L Sbjct: 21 LNQLVERILQEKYDVICLQEVNQLTESEQVVQAPF----YQAVEGAIEIHQDHFALCLVE 76 Query: 73 ------KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDD 126 + G D+ + I + + + + + P + Sbjct: 77 KLAEAGLDYHWSWAYNHIGFDIYNEGVAILSRNPMAPREVLVSEANDPTDYHTRKVLLAE 136 Query: 127 KISWIK------RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + L + + + E + A + + + + Sbjct: 137 TEVEGQLLTIASCHLSWWDKGFQGEWAKLEAELLKVKTPLVLMGDFNNPVGQQGYQTILA 196 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + + + WD ++ID++ S + + Sbjct: 197 SPLKLQDSHAVAREAIGEATVEGTIAGWD------DNKHALKIDYVFTSQGMD--VERSA 248 Query: 241 IDTKPRGWTKPSDH 254 + + SDH Sbjct: 249 VVFDGKETPVVSDH 262 >gi|321455937|gb|EFX67056.1| hypothetical protein DAPPUDRAFT_115747 [Daphnia pulex] Length = 324 Score = 39.8 bits (91), Expect = 0.42, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 26/69 (37%), Gaps = 16/69 (23%) Query: 216 SKNKGIR----------IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 KN G R ID I SP+ + L + + G SDH PVI SL I Sbjct: 164 PKNLGTRPNPNGKESSTIDLIFSSPDLAN-LTNINV-----GPCWGSDHLPVITSLSIGS 217 Query: 266 PRKKQQDST 274 K + Sbjct: 218 SPIKTPNVH 226 >gi|260805867|ref|XP_002597807.1| hypothetical protein BRAFLDRAFT_238945 [Branchiostoma floridae] gi|229283075|gb|EEN53819.1| hypothetical protein BRAFLDRAFT_238945 [Branchiostoma floridae] Length = 254 Score = 39.8 bits (91), Expect = 0.42, Method: Composition-based stats. Identities = 38/263 (14%), Positives = 80/263 (30%), Gaps = 22/263 (8%) Query: 8 TWNVNSIRARIH-----NLAAWIKENNPDIICLQETK-TEDKNFPFETLQSLNYH-IETC 60 TWNV R +A ++ +++ + E++ T + L Y E Sbjct: 4 TWNV---RTMYEAGKTAQIATEMRNYKLEVLGISESRWIGSGQVTLNTGELLLYSGHEEE 60 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 GVA++ + + + + G Sbjct: 61 NAHHTQGVALMLSKTAQKALIGWEAHGPRILTACFRTERRRINIDIIQCYAPTNEGEDEA 120 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 ++ ++ I + + + + + G+ N + + ND R Sbjct: 121 KDEFYSRLLTIIQNRPRRNIVITMGDLNAKVGNNNQGFESIMGKEGLGTMNDNG----ER 176 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + + H H ++ D +++N+ IDHI + + L R Sbjct: 177 FANMCATSNLVIGGSMFQHKRIHKATWTS--PDGFTENQ---IDHICIGKKFRRSLQDVR 231 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263 + RG SDH ++ SL + Sbjct: 232 V---KRGADVSSDHHLLVASLRL 251 >gi|307565860|ref|ZP_07628321.1| endonuclease/exonuclease/phosphatase family protein [Prevotella amnii CRIS 21A-A] gi|307345484|gb|EFN90860.1| endonuclease/exonuclease/phosphatase family protein [Prevotella amnii CRIS 21A-A] Length = 315 Score = 39.8 bits (91), Expect = 0.43, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 22/60 (36%), Gaps = 21/60 (35%) Query: 223 IDHIMLSPEATSLLHSARIDTKP---------------------RGWTKPSDHTPVIVSL 261 +DH ++S S + S I+ P R + SDH P+++ L Sbjct: 254 LDHFLISLNLLSNIKSCSINDAPFLLEEDMKYGGVKPRRNYNGLRYNSGFSDHLPLVLRL 313 >gi|190575838|ref|YP_001973683.1| putative endonuclease/exonuclease/phosphatase family protein [Stenotrophomonas maltophilia K279a] gi|190013760|emb|CAQ47395.1| putative endonuclease/exonuclease/phosphatase family protein [Stenotrophomonas maltophilia K279a] Length = 255 Score = 39.8 bits (91), Expect = 0.43, Method: Composition-based stats. Identities = 15/96 (15%), Positives = 30/96 (31%), Gaps = 14/96 (14%) Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 +A + ++ + R + +F + D IDHI++S Sbjct: 170 HPNAVLMGDFNCLAERPEMQVLYQKTRLQPPGCIVPTFPSWRPD-------RAIDHILVS 222 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 + A SDH + + +D+P Sbjct: 223 SGLQTRTVEAV-------PAAFSDHLALAMQIDVPA 251 >gi|169838781|ref|ZP_02871969.1| Endonuclease/exonuclease/phosphatase [candidate division TM7 single-cell isolate TM7a] Length = 245 Score = 39.8 bits (91), Expect = 0.43, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 34/93 (36%), Gaps = 9/93 (9%) Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230 + + V F + D ++ + D SW N +D I+ S Sbjct: 157 KNCKKPVIVAGDFNVFWGEEEIEMFLQASDLKNINTRKDPTFPSW--NPKRELDFILCSK 214 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 E ++S + T+ SDH P+++ DI Sbjct: 215 EI--KVNSYEVI-----QTQLSDHLPILIDFDI 240 >gi|323350990|ref|ZP_08086647.1| RgfB protein [Streptococcus sanguinis VMC66] gi|322122714|gb|EFX94423.1| RgfB protein [Streptococcus sanguinis VMC66] Length = 271 Score = 39.8 bits (91), Expect = 0.43, Method: Composition-based stats. Identities = 29/268 (10%), Positives = 68/268 (25%), Gaps = 26/268 (9%) Query: 5 TVATWNVNS-------IRARIHNLAAWIKENNPDIICLQETK--TEDKNFPFETLQSLNY 55 T N +S I+ ++ LA I + D+ICLQE TE + Y Sbjct: 3 KFLTLNTHSWMEEEQEIK--LNQLAERILQEKYDVICLQEVNQLTESEQVVQAPF----Y 56 Query: 56 HIETCGQKSYNGVAILS---------KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 + + L + G D+ + I + + + + Sbjct: 57 QAVEGAIEIHQDHFALCLVEKLAEAGLDYHWSWAYNHIGFDIYNEGVAILSRKPLTPREV 116 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 + + P + + + ++ Sbjct: 117 LVSEVNDPRDYHTRKVLLAETEVDGQLLTIASCHLSWWDKGFQGEWAKLEEELLKVKTPL 176 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226 ++ + + + D+ + + A ++ID++ Sbjct: 177 VLMGDFNNPVGQQGYQTILASPLKLQDSHAVAREAIGEATVEGTIAGWDDNKHALKIDYV 236 Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDH 254 S + + + + SDH Sbjct: 237 FTSQGMD--VERSAVVFDGKETPVVSDH 262 >gi|325073605|gb|ADY76659.1| phosphatase [Streptomyces sp. DSM 5940] Length = 255 Score = 39.8 bits (91), Expect = 0.44, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 12/62 (19%) Query: 2 SVVTVATWNVNS-I------RARIHNL---AAWIKENNPDIICLQETKTEDKNFPFETLQ 51 +++ +ATWN+ I R I +L A+ + ++ PD++CLQE D + E+ Sbjct: 4 TLLRIATWNMGGGILGESHQRDGIPSLDYYASVLADHRPDVLCLQE--AHDYDGRRESQS 61 Query: 52 SL 53 Sbjct: 62 EY 63 >gi|281338309|gb|EFB13893.1| hypothetical protein PANDA_019337 [Ailuropoda melanoleuca] Length = 126 Score = 39.8 bits (91), Expect = 0.44, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 37/110 (33%), Gaps = 12/110 (10%) Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 E + L M F D R H YSF+ S+S I+HI+ Sbjct: 14 KQKINKETKALKDTLYRMDFIDIYRTFHPKPTQYSFFSSAHGSFSG-----IEHILGYKS 68 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 + I SDH + + L+ K +++ + +K I Sbjct: 69 GFNRYKKIVIIPWI-----FSDHNALKLELN--HKEKFGRNTNTWRLKKI 111 >gi|239942303|ref|ZP_04694240.1| hypothetical protein SrosN15_15000 [Streptomyces roseosporus NRRL 15998] gi|239988768|ref|ZP_04709432.1| hypothetical protein SrosN1_15772 [Streptomyces roseosporus NRRL 11379] gi|291445762|ref|ZP_06585152.1| predicted protein [Streptomyces roseosporus NRRL 15998] gi|291348709|gb|EFE75613.1| predicted protein [Streptomyces roseosporus NRRL 15998] Length = 255 Score = 39.8 bits (91), Expect = 0.44, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 12/62 (19%) Query: 2 SVVTVATWNVNS-I------RARIHNL---AAWIKENNPDIICLQETKTEDKNFPFETLQ 51 +++ +ATWN+ I R I +L A+ + ++ PD++CLQE D + E+ Sbjct: 4 TLLRIATWNMGGGILGESHQRDGIPSLDYYASVLADHRPDVLCLQE--AHDYDGRRESQS 61 Query: 52 SL 53 Sbjct: 62 EY 63 >gi|150866588|ref|XP_001386237.2| hypothetical protein PICST_49245 [Scheffersomyces stipitis CBS 6054] gi|149387844|gb|ABN68208.2| predicted protein [Scheffersomyces stipitis CBS 6054] Length = 318 Score = 39.8 bits (91), Expect = 0.44, Method: Composition-based stats. Identities = 34/252 (13%), Positives = 66/252 (26%), Gaps = 20/252 (7%) Query: 32 IICLQET-KTEDKNF--------PFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTH 82 I+CLQE K + + P E + + I + + + + Sbjct: 65 IVCLQEVYKFQLNDIMKELNRYSPNEDWKYYGVGRIDGMELGEFVPIIYKESEWELVFSD 124 Query: 83 LPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF----- 137 + + + G+ ++ + + + Sbjct: 125 SLWLNEKNTRS-SLTGWDAQYPRIVSYVTMKHKGSENYINVFNTHLDHVGEKSKIGSVKL 183 Query: 138 --ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF--TLEVRQSFQKLQNMGFTD 193 + + P GD+N P +D T R +K GF Sbjct: 184 IGQTMKSINSWPSFLCGDFNTEPDDAAFKQLEESFSDVSTLSTPFNRYGHEKSSVTGFEG 243 Query: 194 AIRATHDTHHLYSFWD-YYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPS 252 + Y F Y A K + ID + + L + G + S Sbjct: 244 EVLLQGGQSIDYIFAPKYTAKMSDKPQCDSIDVNSAANKLFLRLQGFGMLHSKFGGSYMS 303 Query: 253 DHTPVIVSLDIP 264 DH P++ + Sbjct: 304 DHRPIVADFSLS 315 >gi|91080695|ref|XP_975263.1| PREDICTED: similar to carbon catabolite repressor protein [Tribolium castaneum] Length = 481 Score = 39.8 bits (91), Expect = 0.44, Method: Composition-based stats. Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 24/94 (25%) Query: 6 VATWNV------------------NSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNF 45 V T+NV +S++ R +NL A I+ NPDI+CLQE ++ + Sbjct: 119 VMTYNVLAQDLVNQHPYLYALHRKDSLKWDTRWNNLLAEIRNLNPDILCLQEV--QNTHL 176 Query: 46 P--FETLQSLNYHIETCGQKSYNGVAILSKYQPI 77 F TL +L Y + Y+P Sbjct: 177 DQYFSTLDTLGYQGLYKQRTGPRTDGCAIYYKPH 210 >gi|46190974|ref|ZP_00120778.2| hypothetical protein Blon03000651 [Bifidobacterium longum DJO10A] gi|189440783|ref|YP_001955864.1| metal-dependent hydrolase [Bifidobacterium longum DJO10A] gi|312134036|ref|YP_004001375.1| elsh2 [Bifidobacterium longum subsp. longum BBMN68] gi|189429218|gb|ACD99366.1| Metal-dependent hydrolase [Bifidobacterium longum DJO10A] gi|311773343|gb|ADQ02831.1| ElsH2 [Bifidobacterium longum subsp. longum BBMN68] Length = 320 Score = 39.8 bits (91), Expect = 0.44, Method: Composition-based stats. Identities = 33/258 (12%), Positives = 66/258 (25%), Gaps = 43/258 (16%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTED--KNFPFETLQSLNYHIETCGQ 62 V T+NV +A + +++ +++ LQET TED K ++ + + Sbjct: 100 RVMTFNVYKGQADPQAIVELVRDQRVEVLALQET-TEDFVKKLNEAGIEHYLPYAQVSSS 158 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 G + S + + + + G Sbjct: 159 DGVFGNGLWSATPLADPTDDDVNSSASFMPGGTVDMGGQQIRFVSVHTTAPVPG------ 212 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 W + R + IF GD+N + + Sbjct: 213 ---YWRQWKRSLDELGLMREHTDTRYIFMGDFNATYDHTPFRDFL--------------- 254 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 +S+ A + G IDH++L ++ Sbjct: 255 ------GDRFVDAARESGHGFTFSWPTNRA-AVPMFAG--IDHVVLDQGM--KAGQCKVV 303 Query: 243 TKPRGWTKPSDHTPVIVS 260 SDH ++ + Sbjct: 304 KVE-----GSDHAALLAT 316 >gi|147782527|emb|CAN70693.1| hypothetical protein VITISV_041975 [Vitis vinifera] Length = 1795 Score = 39.8 bits (91), Expect = 0.45, Method: Composition-based stats. Identities = 19/195 (9%), Positives = 54/195 (27%), Gaps = 8/195 (4%) Query: 13 SIRARIHN--LAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYHIETCGQKSYNGVA 69 + +R + +++ N D++ +QET K E P + + + + Sbjct: 880 GLGSRKKRRVVKDFLRLENXDVVMIQETKKVECDRRPLWLFAXYGPNDPLLRKDFWVELL 939 Query: 70 ILSKYQPIEIVTHLPGDDLDVQARF-----IEATFTINTQTLRIGNLYLPHGNPITSTKY 124 + + + + + + ++ +R L P T Sbjct: 940 DIFSLSFLLWCVGGDFNVIKRSSEKLGGSSLTSSMKDFBXFIRECELLDPPLRNAPFTWS 999 Query: 125 DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ 184 + + S + + L E E + + + D + ++ N + + Sbjct: 1000 NMQESPVCKRLDRFLYSNEWEHHFPQSLQEALPRRTSDHWPIVLETNXFKWGPTPFRFEN 1059 Query: 185 KLQNMGFTDAIRATH 199 + Sbjct: 1060 MWLQHPSFKECFKKN 1074 >gi|325695113|gb|EGD37015.1| RgfB protein [Streptococcus sanguinis SK150] Length = 271 Score = 39.8 bits (91), Expect = 0.45, Method: Composition-based stats. Identities = 28/268 (10%), Positives = 66/268 (24%), Gaps = 26/268 (9%) Query: 5 TVATWNVNS-------IRARIHNLAAWIKENNPDIICLQETK--TEDKNFPFETLQSLNY 55 T N +S I+ ++ L I + D+ICLQE TE + Y Sbjct: 3 KFLTLNTHSWMEEGQEIK--LNQLVERILQEKYDVICLQEVNQLTESEQVVQAPF----Y 56 Query: 56 HIETCGQKSYNGVAILS---------KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 + L + G D+ + I + + ++ + Sbjct: 57 QAVEGAIAIHQDNFALCLVEKLAEAGLDYHWSWAYNHIGFDIYNEGVAILSRKPLASREV 116 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 + P + + + ++ Sbjct: 117 LVSEANDPRDYHTRKVLLAETEVEGQLLTIASCHLSWWDKGFQGEWAKLEEELLKVKTPL 176 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226 ++ + + + D+ + + A ++ID++ Sbjct: 177 VLMGDFNNPVGQQGCQTILASPLKLQDSHAVAREAIGEATVEGTIAGWDDNKHALKIDYV 236 Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDH 254 S + + + + SDH Sbjct: 237 FTSQGID--VERSAVVFDGKEIPVVSDH 262 >gi|325859957|ref|ZP_08173084.1| endonuclease/exonuclease/phosphatase family protein [Prevotella denticola CRIS 18C-A] gi|325482483|gb|EGC85489.1| endonuclease/exonuclease/phosphatase family protein [Prevotella denticola CRIS 18C-A] Length = 356 Score = 39.8 bits (91), Expect = 0.45, Method: Composition-based stats. Identities = 26/256 (10%), Positives = 57/256 (22%), Gaps = 44/256 (17%) Query: 30 PDIICLQETKTEDKNFPFET-----LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLP 84 PDI+ L E E+ + F+ L+ Y G+ + Y P Sbjct: 114 PDIVGLCEV--ENDSVLFDLTRRSLLRKARYEYVMTASDDRRGIDVALLYSPFSFRLIKA 171 Query: 85 GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL 144 + T + + +G+ + + Sbjct: 172 DTIHVAPMADMRPTRD-----ILHVEGEIENGDTLHVFLLHAPSRMGGERYSRPFRLYVA 226 Query: 145 EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL 204 + + + A + + + + Sbjct: 227 GLLCQAVDSLRSLYADPRILVMGDFNDYADS--PSVRLLCTRGFVNVSARAHGNNGAKGT 284 Query: 205 YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKP------------------- 245 Y + +W +D I++S + S + Sbjct: 285 YRY----HGAWGS-----LDQILVSENLCPWVISCHVHDAAFLLEEDDKYGGVKPRRNYN 335 Query: 246 --RGWTKPSDHTPVIV 259 R SDH P+++ Sbjct: 336 GMRYNNGFSDHLPLVL 351 >gi|320170151|gb|EFW47050.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864] Length = 684 Score = 39.8 bits (91), Expect = 0.45, Method: Composition-based stats. Identities = 29/141 (20%), Positives = 45/141 (31%), Gaps = 22/141 (15%) Query: 2 SVVTVATWNV--------NS---------IRA---RIHNLAAWIKENNPDIICLQETKTE 41 + V ++N+ NS RA R NL A I PDI+CLQE Sbjct: 255 NKFKVMSYNILANQHFRNNSYLYRWTPSAARAWSYRRANLVAEITALQPDILCLQELD-S 313 Query: 42 DKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI 101 + P ETL+ L Y + + + + ++ + Sbjct: 314 YHDLP-ETLRHLGYSGRYFKKTGGEATDACAIFVKSDRFAINRVHNVQNFIEGSRVLTSH 372 Query: 102 NTQTLRIGNLYLPHGNPITST 122 N L + + LP I Sbjct: 373 NIGMLAVVTMQLPTAPWIRKM 393 >gi|323463737|gb|ADX75890.1| endonuclease/exonuclease/phosphatase family protein [Staphylococcus pseudintermedius ED99] Length = 623 Score = 39.8 bits (91), Expect = 0.45, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 30/93 (32%), Gaps = 10/93 (10%) Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232 + K + YS+ Y ++ + +DHI++S Sbjct: 526 GDYNDFQWSKPLKTFESYGLTNKVNDVPKNKRYSYV-YQGNTQT------LDHILVSEHL 578 Query: 233 TS--LLHSARIDTKPRGWT-KPSDHTPVIVSLD 262 L +++ + SDH P++ +D Sbjct: 579 KRQTKLDMIHVNSDFTDMAGRASDHDPILAQID 611 >gi|328946822|gb|EGG40959.1| RgfB protein [Streptococcus sanguinis SK1087] Length = 271 Score = 39.8 bits (91), Expect = 0.46, Method: Composition-based stats. Identities = 25/248 (10%), Positives = 62/248 (25%), Gaps = 17/248 (6%) Query: 18 IHNLAAWIKENNPDIICLQETK--TEDKNFPFETLQSLNYHIETCGQKSYNGVAILS--- 72 ++ LA I + D+ICLQE TE + Y + + L Sbjct: 21 LNQLAERILQEKYDVICLQEVNQLTESEQVVQAPF----YQAVEGAIEIHQDHFALCLVE 76 Query: 73 ------KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDD 126 + G D+ + I + + + + + + P + Sbjct: 77 KLAEAGLDYHWSWAYNHIGFDIYNEGVAILSRKPLTPREVLVSEVNDPRDYHTRKVLLAE 136 Query: 127 KISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL 186 + + ++ ++ + + Sbjct: 137 TEVDGQLLTIASCHLSWWDKGFQGEWAKLEEELLKVKTPLVLMGDFNNPVGQQGYQTILA 196 Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR 246 + D+ + + A ++ID++ S + + + + Sbjct: 197 SPLKLQDSHAVAREAIGEATVEGTIAGWDDNKHALKIDYVFTSQGMD--VERSAVVFDGK 254 Query: 247 GWTKPSDH 254 SDH Sbjct: 255 ETPVVSDH 262 >gi|224153842|ref|XP_002337404.1| predicted protein [Populus trichocarpa] gi|222838981|gb|EEE77332.1| predicted protein [Populus trichocarpa] Length = 337 Score = 39.8 bits (91), Expect = 0.46, Method: Composition-based stats. Identities = 46/279 (16%), Positives = 87/279 (31%), Gaps = 45/279 (16%) Query: 6 VATWNVNSI--RARIHNLAAWIKENNPDIICLQETKTED-KNFPFETLQSLNYHIETCGQ 62 + WNV + R + L ++ + I+ + ETK E +F + + Sbjct: 11 IIVWNVCGLGGREKKRCLRNLGRKFDLHILGILETKLETLNDFTITAIWGRHPRAWYAVL 70 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 IL + P ++ + IE TFT + + +Y P+G + + Sbjct: 71 SLGLSGGILCIWNPDLFCVSSCSVAMNGRILHIEGTFTRSNLDCLVSFVYAPNGGNLKNE 130 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + +++ + +F D Q D C +E+ Sbjct: 131 LWTYLVTFRDSVSKPW-CLAGDFNETLFPSDRKGSSQITSSMTRFKNCIDGCNLMELPL- 188 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 +++ ++ RID I +S + S+ Sbjct: 189 ------------------NGRKFTW--SRGNA-----ASRIDRIFVSGDWLQTFPSST-- 221 Query: 243 TKPRGWTKP-SDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 G +K SDH P+ + LD ST+ KP Sbjct: 222 --LFGLSKYSSDHRPLHLLLD----------STNWGPKP 248 >gi|307275377|ref|ZP_07556520.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecalis TX2134] gi|306508011|gb|EFM77138.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecalis TX2134] gi|315149596|gb|EFT93612.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecalis TX0012] Length = 274 Score = 39.8 bits (91), Expect = 0.46, Method: Composition-based stats. Identities = 29/243 (11%), Positives = 58/243 (23%), Gaps = 14/243 (5%) Query: 32 IICLQET--KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLD 89 II LQE K K P E L + N ++ +Y + + ++ Sbjct: 34 IIALQEVNQKVASKKVPLEQLTTFCPIATQTPIHEDNFAYLIVQYLAEKGQHYYWSWEMS 93 Query: 90 VQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRL----ELE 145 I + + L T Y + + Sbjct: 94 HIGYAIYEEGNALLSKCPLTSEALLISESQEPTNYRTRKILVAETESSKGTLTVVSGHFS 153 Query: 146 EPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNM------GFTDAIRATH 199 + + Y + + + + DA Sbjct: 154 WWETPCTGFAYEWLQLEKYLAMGQQPLVILGDLNNPAGTTGYQLVENSYLPIQDAFVVAE 213 Query: 200 DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 +T + +RID+ +S + + + R SDH +++ Sbjct: 214 ETSGEATVEKKIDGWEENEAALRIDYAFVSKQW--HVRKYEVIFDGRKTPIVSDHFGLLI 271 Query: 260 SLD 262 L Sbjct: 272 QLK 274 >gi|227546644|ref|ZP_03976693.1| endonuclease/exonuclease/phosphatase [Bifidobacterium longum subsp. infantis ATCC 55813] gi|322691706|ref|YP_004221276.1| hypothetical protein BLLJ_1517 [Bifidobacterium longum subsp. longum JCM 1217] gi|227212961|gb|EEI80840.1| endonuclease/exonuclease/phosphatase [Bifidobacterium longum subsp. infantis ATCC 55813] gi|320456562|dbj|BAJ67184.1| conserved hypothetical protein [Bifidobacterium longum subsp. longum JCM 1217] Length = 335 Score = 39.8 bits (91), Expect = 0.46, Method: Composition-based stats. Identities = 33/258 (12%), Positives = 66/258 (25%), Gaps = 43/258 (16%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTED--KNFPFETLQSLNYHIETCGQ 62 V T+NV +A + +++ +++ LQET TED K ++ + + Sbjct: 115 RVMTFNVYKGQADPQAIVELVRDQRVEVLALQET-TEDFVKKLNEAGIEHYLPYAQVSSS 173 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 G + S + + + + G Sbjct: 174 DGVFGNGLWSATPLADPTDDDVNSSASFMPGGTVDMGGQQIRFVSVHTTAPVPG------ 227 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 W + R + IF GD+N + + Sbjct: 228 ---YWRQWKRSLDELGLMREHTDTRYIFMGDFNATYDHTPFRDFL--------------- 269 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 +S+ A + G IDH++L ++ Sbjct: 270 ------GDRFVDAARESGHGFTFSWPTNRA-AVPMFAG--IDHVVLDQGM--KAGQCKVV 318 Query: 243 TKPRGWTKPSDHTPVIVS 260 SDH ++ + Sbjct: 319 KVE-----GSDHAALLAT 331 >gi|327461997|gb|EGF08326.1| RgfB protein [Streptococcus sanguinis SK1057] Length = 271 Score = 39.8 bits (91), Expect = 0.46, Method: Composition-based stats. Identities = 25/248 (10%), Positives = 61/248 (24%), Gaps = 17/248 (6%) Query: 18 IHNLAAWIKENNPDIICLQETK--TEDKNFPFETLQSLNYHIETCGQKSYNGVAILS--- 72 ++ LA I + D+ICLQE TE + Y + + L Sbjct: 21 LNQLAERILQEKYDVICLQEVNQLTESEQVVQAPF----YQAVEGAIEIHRDHFALCLVE 76 Query: 73 ------KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDD 126 + G D+ + I + + + + + P + Sbjct: 77 KLAEAGLDYHWSWAYNHIGFDIYNEGVAILSRNPMAPREVLVSEANDPRDYHTRKVLLAE 136 Query: 127 KISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL 186 + + ++ ++ + + Sbjct: 137 TEVDGQLLTIASCHLSWWDKGFQGEWAKLEEELLKVKTPLVLMGDFNNPVGQQGYQTILA 196 Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR 246 + D+ + + A ++ID++ S + + + + Sbjct: 197 SPLKLQDSHAVAREAIGEATVEGTIAGWDDNKHALKIDYVFTSQGMD--VERSTVVFDGK 254 Query: 247 GWTKPSDH 254 SDH Sbjct: 255 ETPVVSDH 262 >gi|268316715|ref|YP_003290434.1| Endonuclease/exonuclease/phosphatase [Rhodothermus marinus DSM 4252] gi|262334249|gb|ACY48046.1| Endonuclease/exonuclease/phosphatase [Rhodothermus marinus DSM 4252] Length = 370 Score = 39.8 bits (91), Expect = 0.46, Method: Composition-based stats. Identities = 44/295 (14%), Positives = 69/295 (23%), Gaps = 41/295 (13%) Query: 6 VATWNV-NSIRARI-HNLAAWIKENNPDIICLQET--------------KTEDKNFPFET 49 V T+NV S R + +L A + P +I QE + P Sbjct: 93 VMTYNVPESRRPALGDSLQALVLRYRPQLIGFQEVGVWRYEQRGRPSTVRLIGHLRPLVE 152 Query: 50 LQSLNYHIETCGQKSYNG---VAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 Q + + + EI G + + + Sbjct: 153 RQGFRFSVPDPTRGPMFAEVVTLTRLPVVRQEIRLLERGPEGLIYQAVRSELCWAGRLFV 212 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 +G D R A + P Sbjct: 213 HYNVRLQSYGPVKPWEVLRDGGWKRPANWRRWLGAYRRAMLQRAAQVRQLRAWIDQEELP 272 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI-RIDH 225 +I D T + + + + A SW + + RIDH Sbjct: 273 VILSGDFNSTPDQWFYGWLSRGLQAAGRLGGIA------------APSWPAGRPLVRIDH 320 Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 +++S E + SDH PVI L R T P Sbjct: 321 VLVSREW-------EVLGGAVPAAGLSDHRPVIARLRW--RRTSASPGTCPFDAP 366 >gi|226509154|ref|NP_001146094.1| hypothetical protein LOC100279626 [Zea mays] gi|219885683|gb|ACL53216.1| unknown [Zea mays] Length = 605 Score = 39.8 bits (91), Expect = 0.46, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 21/54 (38%), Gaps = 6/54 (11%) Query: 7 ATWNVNSIRARIHNLAAWIKENNPDIICLQETKTED-KNFPFETLQSLNYHIET 59 TWN R NL I + DIICLQE + ++F L Y Sbjct: 281 LTWN-----YRRQNLLREIIGYHADIICLQEVQVNHFEDFFSPELDKHGYQALY 329 >gi|260805302|ref|XP_002597526.1| hypothetical protein BRAFLDRAFT_157550 [Branchiostoma floridae] gi|229282791|gb|EEN53538.1| hypothetical protein BRAFLDRAFT_157550 [Branchiostoma floridae] Length = 274 Score = 39.8 bits (91), Expect = 0.47, Method: Composition-based stats. Identities = 31/251 (12%), Positives = 64/251 (25%), Gaps = 20/251 (7%) Query: 9 WNVNSIRARIH--NLAAWIKENNPDIICLQETKTED-KNFPFETLQSLNYHIETCGQKSY 65 WNV ++ + ++E N +I+ L E + D F + L + Sbjct: 4 WNVRTLYQASKLAQVIKEMEEYNLNILGLSEVRWTDSGKFVSDDKTIL---FSGRQDGIH 60 Query: 66 NGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYD 125 L +P + T ++ + T Y+ Sbjct: 61 RDGVALVLDKPASNALEEWSPINERLLTARFVTNHAKVTIVQCYAPINERDDIHKDTFYE 120 Query: 126 DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQK 185 + + R + + G + ++ + Sbjct: 121 QLQDLVDKTPRHDILVIMGDMNAQIGGSREGFEHTLGPHAFGNRTDNGDRYIHFCSMNNM 180 Query: 186 LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT-SLLHSARIDTK 244 + H + ++ + ++ IDHI + P L R+ Sbjct: 181 KIGSSLFE-----HKDIYKITWLSNDHKTRTQ-----IDHIAIGPRWRTPCLQDVRVY-- 228 Query: 245 PRGWTKPSDHT 255 RG SDH Sbjct: 229 -RGADVGSDHY 238 >gi|115481910|ref|NP_001064548.1| Os10g0401100 [Oryza sativa Japonica Group] gi|110289058|gb|ABG66071.1| endonuclease/exonuclease/phosphatase family protein, putative, expressed [Oryza sativa Japonica Group] gi|113639157|dbj|BAF26462.1| Os10g0401100 [Oryza sativa Japonica Group] Length = 411 Score = 39.8 bits (91), Expect = 0.47, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 7/41 (17%) Query: 2 SVVTVATWNVNSIR------ARIHNLAAWIKENNPDIICLQ 36 + T+NV IR R+ L I+ +NPD IC Q Sbjct: 139 KTFKIMTYNVW-IREDIELHRRLGALGDLIQLHNPDFICFQ 178 >gi|118371231|ref|XP_001018815.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena thermophila] gi|89300582|gb|EAR98570.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena thermophila SB210] Length = 345 Score = 39.8 bits (91), Expect = 0.47, Method: Composition-based stats. Identities = 36/264 (13%), Positives = 78/264 (29%), Gaps = 33/264 (12%) Query: 2 SVVTVATW--NVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIE 58 + V W NV S+ ++ ++L + + PD++ L ET + + ET NY I Sbjct: 25 RTIKV--WGANVASLNSKGNDLKELLDQKKPDVVLLNETWLKSE----ETFDDPNYLEIA 78 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 T + + G AIL + + + + I + I P GN Sbjct: 79 TDFNQKHQGTAILLRINSSKYYSCYQVSHSNKNLTEIVLRLDPENKIHFISVYAPPQGNE 138 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + + +S +R + + + ++ +++ Sbjct: 139 NRDEQREKALSDFYSTVREFKFDQNYKCIGYSDFNARLRKFVDKQDADAKNLLESLKSIK 198 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 + + + + ++ Y ID+ Sbjct: 199 LNLIYDLKPSSFTRSGTNSKNEASQSY-----------------IDYFFY-RNL--SYKK 238 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 +I SDH+ + V + Sbjct: 239 FKILDSIGK----SDHSLLEVQIK 258 >gi|150863920|ref|XP_001382566.2| hypothetical protein PICST_30030 [Scheffersomyces stipitis CBS 6054] gi|149385176|gb|ABN64537.2| predicted protein [Scheffersomyces stipitis CBS 6054] Length = 320 Score = 39.8 bits (91), Expect = 0.47, Method: Composition-based stats. Identities = 34/257 (13%), Positives = 68/257 (26%), Gaps = 24/257 (9%) Query: 8 TWNV--N--SIRARIHNLAAWIKENNPD---IICLQETKTEDKNFPFETLQSLNYHIETC 60 TWN+ N S R + I + I+ LQE K KN + +Q L + Sbjct: 75 TWNLKRNEESWAKRRARVIDCITHCSAHLPTIVGLQEVK---KNQLDDIIQGLGSGWDYF 131 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 G +G+ + T+ ++ + + I Sbjct: 132 GVGRDDGIDKGEFAPIFYKSSEW--------QLVSGTTYWLSETPAKPSKGWDAALPRIV 183 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 ++ + + + I D + D + Sbjct: 184 TSIIVKHKQSGREIKCMNTHYDHKGKEARNNSSRMIKELASDHSHVCCVLGDFNAEPDHV 243 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 A Y+F ++ S++ ID+I ++ + + Sbjct: 244 AYSILASGNLLDTATNCFKRDGFQYTF-SGFSKEESEST---IDYIWVT--LPARILKFH 297 Query: 241 IDTKPRGWTKPSDHTPV 257 + SDH P+ Sbjct: 298 VMNNEFNDRNFSDHRPL 314 >gi|326473513|gb|EGD97522.1| endonuclease/exonuclease/phosphatase [Trichophyton tonsurans CBS 112818] Length = 292 Score = 39.8 bits (91), Expect = 0.48, Method: Composition-based stats. Identities = 42/300 (14%), Positives = 83/300 (27%), Gaps = 53/300 (17%) Query: 3 VVTVATWNVN-------------SIRARIHNLAAWIK---ENNPD-IICLQETKTEDKNF 45 + + T N+ S+RA ++ + NP+ +CLQE Sbjct: 7 LFRILTHNIRYATTSPSAGEQPWSVRA--PHIVNELDYHSRLNPESFVCLQE--ALHNQV 62 Query: 46 PF------------ETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR 93 ET Q Y + K + + + + L Sbjct: 63 TDVLAGLNSRPHAAETDQWAYYGVGRDDGKQAGEYSPIFYRPAVWTLQEKETVWLSETPS 122 Query: 94 FIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGD 153 + + + ++ + IT + + RF S +L L + Sbjct: 123 VPSKGWDAASIRIVTIGVFNHKSSNITVLAMNTHLDDQGSKSRFESAKLILSLIQKYLAR 182 Query: 154 YNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD 213 + + E + + + + ++ +D Sbjct: 183 -YPEVKGNFLAGDFNSIESQEAYREFTKPGSSIVDTYKKVPAAQHYGDEITFTGFD---- 237 Query: 214 SWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP----------SDHTPVIVSLDI 263 K KG RID++M+ P+ SA I G+ SDH V+ + + Sbjct: 238 --GKTKGSRIDYVMVGPQ---SCSSASIPFTVNGYAVMPNRFDNRIYNSDHRAVVADITL 292 >gi|307725679|ref|YP_003908892.1| endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1003] gi|307586204|gb|ADN59601.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1003] Length = 258 Score = 39.8 bits (91), Expect = 0.48, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 11/43 (25%) Query: 4 VTVATWNVNSI------R--ARIHNLAAWIKENNPDIICLQET 38 + + T+N++ R ARI A I N D++ LQE Sbjct: 34 LRIVTYNIHGAVGTDGKRSGARI---AEVISALNADVVALQEV 73 >gi|115948334|ref|XP_001179619.1| PREDICTED: similar to bucentaur [Strongylocentrotus purpuratus] gi|115974782|ref|XP_001180110.1| PREDICTED: similar to bucentaur [Strongylocentrotus purpuratus] Length = 320 Score = 39.8 bits (91), Expect = 0.48, Method: Composition-based stats. Identities = 36/266 (13%), Positives = 88/266 (33%), Gaps = 21/266 (7%) Query: 8 TWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTED-KNFPFETLQSLNYHIETCGQKSY 65 TWN +IR +I + ++ N +++ L E + D + + + I + G+ Sbjct: 47 TWNTRTIRDDKIETIKREMQRYNMNLLALTEIRWLDSGDLMSDEFKV----IYSEGKVRQ 102 Query: 66 NGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYD 125 GVA+L Q + V R + + + + +Y+P + D Sbjct: 103 RGVALLLDKQTAK----NVCRIKAVSDRPLAVRIKGSPVDIVVLVVYMPPSDYEDKDVED 158 Query: 126 DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQK 185 + + R+ L + G + D + + Q ++ Sbjct: 159 IYDMIDEELEKGNDYRILLGDWNAVVGS---SHKHDDAVDEWGLGRQNHRGNMLVQFCKR 215 Query: 186 LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKP 245 + + Y++ + + ID+I+++ + + + Sbjct: 216 RKLVVINTLFEQHPRYTRRYTWKAPGDTARYQ-----IDYILVNQRYKNSVKKSLAYP-- 268 Query: 246 RGWTKPSDHTPVIVSLDIPEPRKKQQ 271 G SDH V++++ + + + Sbjct: 269 -GADCDSDHNLVMMTVQLNLKKMRGS 293 >gi|295680429|ref|YP_003609003.1| endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1002] gi|295440324|gb|ADG19492.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1002] Length = 250 Score = 39.8 bits (91), Expect = 0.48, Method: Composition-based stats. Identities = 8/40 (20%), Positives = 17/40 (42%), Gaps = 5/40 (12%) Query: 4 VTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQET 38 + + T+N++ + + + E + DI LQE Sbjct: 22 LRIGTYNLHGAVGIDGKFAPKRIGDVLTEIDADIFALQEV 61 >gi|212547123|ref|XP_002153714.1| reverse transcriptase, putative [Penicillium marneffei ATCC 18224] gi|210064370|gb|EEA18467.1| reverse transcriptase, putative [Penicillium marneffei ATCC 18224] Length = 614 Score = 39.8 bits (91), Expect = 0.48, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 21/57 (36%), Gaps = 5/57 (8%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKP-SDHTPVIVSLDIPEPRKKQQDSTSQNM 278 ID LS + L I + + SDH P+ LDI P K+ + Sbjct: 72 IDLTFLSGSLFNRL----ILIERADSVQHDSDHWPIQTQLDIDTPTKEPPKRRNWAA 124 >gi|299144741|ref|ZP_07037809.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_23] gi|298515232|gb|EFI39113.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_23] Length = 611 Score = 39.8 bits (91), Expect = 0.48, Method: Composition-based stats. Identities = 33/278 (11%), Positives = 77/278 (27%), Gaps = 58/278 (20%) Query: 3 VVTVATWNV---NSIRARIH------NLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + T+N+ N + +A I +PD++ +Q Sbjct: 25 TLRLMTYNIKNANG----MDDICSFQRVANVINNASPDVVAIQ----------------- 63 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 +++ ++S + + ++ ++ LR+ + L Sbjct: 64 --EVDSMTRRSRQKYVLGEIAERTQMHACFAPAIEFEGGKYGIG-LLTKQVPLRLQTIPL 120 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 P + + +I + + + L + + Sbjct: 121 PGREEARTLILAEFEDYIYCCTHLSLTEEDRMKSLEIVKSLIASYKKPLFLAGDMNAEPE 180 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 ++ Q ++ + A ID+I S + Sbjct: 181 SDFIKELQKDFQILSNPEKHTYPAPAPKET-------------------IDYIAASKQNA 221 Query: 234 S--LLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKK 269 + + SAR+ +P SDH P++V L E K Sbjct: 222 TGFAVISARVVNEPM----ASDHRPILVELRTAEKADK 255 >gi|294506837|ref|YP_003570895.1| hypothetical protein SRM_01022 [Salinibacter ruber M8] gi|294343165|emb|CBH23943.1| conserved hypothetical protein [Salinibacter ruber M8] Length = 445 Score = 39.8 bits (91), Expect = 0.48, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 5/44 (11%) Query: 220 GIRIDHIMLSPEATSLLHSARIDTKP--RGWTKP-SDHTPVIVS 260 G RID+++ P AT + A + R P SDH PV V Sbjct: 399 GARIDYVL--PAATVAVDDAGVWRPAPARVPDVPVSDHFPVWVD 440 >gi|125574717|gb|EAZ16001.1| hypothetical protein OsJ_31445 [Oryza sativa Japonica Group] Length = 293 Score = 39.8 bits (91), Expect = 0.48, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 7/41 (17%) Query: 2 SVVTVATWNVNSIR------ARIHNLAAWIKENNPDIICLQ 36 + T+NV IR R+ L I+ +NPD IC Q Sbjct: 21 KTFKIMTYNVW-IREDIELHRRLGALGDLIQLHNPDFICFQ 60 >gi|319790707|ref|YP_004152347.1| endonuclease/exonuclease/phosphatase [Variovorax paradoxus EPS] gi|315593170|gb|ADU34236.1| Endonuclease/exonuclease/phosphatase [Variovorax paradoxus EPS] Length = 262 Score = 39.8 bits (91), Expect = 0.49, Method: Composition-based stats. Identities = 31/286 (10%), Positives = 63/286 (22%), Gaps = 63/286 (22%) Query: 2 SVVTVATWNVN-SIRA-----RIHNLAAWIKENNPDIICLQET---------KTE--DKN 44 + + V T N + A + L ++ D++ LQE K Sbjct: 16 TSLKVMTVNTHKGFTALNRKFILPELRDAVRTVGADVVFLQEVLGTHSRHSRKVSNWPDA 75 Query: 45 FPFETLQS-------LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA 97 +E L + N V Sbjct: 76 PHYEFLADTMWPQFAYGRNAVYPKGHHGNAVLSKFPIVHFRNHDVSVSGPEKRGLLHCVL 135 Query: 98 TFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII 157 T + + +L + + ++ + + + + + G + + Sbjct: 136 RLPGRTVDVHVICAHLGLAEAHRQQQLELLCHIVRDEVPADAPLIVAGDFNDWRGRAHEV 195 Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK 217 EV F +Y + Sbjct: 196 L------------EKGADLREVFVHANGRAARTFPSRFPLL-PLDRIY----------VR 232 Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 N G A + R W+ SDH P++ +D+ Sbjct: 233 NAG----------------VHAPVVLPRRPWSHLSDHAPLVADIDL 262 >gi|295689833|ref|YP_003593526.1| endonuclease/exonuclease/phosphatase [Caulobacter segnis ATCC 21756] gi|295431736|gb|ADG10908.1| Endonuclease/exonuclease/phosphatase [Caulobacter segnis ATCC 21756] Length = 283 Score = 39.8 bits (91), Expect = 0.49, Method: Composition-based stats. Identities = 31/270 (11%), Positives = 68/270 (25%), Gaps = 29/270 (10%) Query: 6 VATWNV---N-----SIRARIHNLAAWIKENNPDIICLQETKTE-DKNFPFETLQSLNYH 56 V ++N+ N R R +A I +PDI+ +QE + +Y Sbjct: 32 VMSYNIRYDNPEDRPDWRMRREPMARQISFFSPDILGVQEALVPMVADLSAALPGYAHYG 91 Query: 57 I--ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 + + + + ++ + + R+ Sbjct: 92 VGRDDGDKAGETTTIFYRSARFERLLAQTRWCSPTPERPGKAYDAALPRTYARVVLR--- 148 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 D + + E + A P ++ + ++ Sbjct: 149 ----------DRASGVLLDVRNAHLDHVGAESRRLCARQLRDQPTWPGARLVVLGDFNSA 198 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 + + +F D+ + ID++ + Sbjct: 199 PGEPPHDVLTSGGDGLRDARAASPIVFGPAGTFNDFSPGAPPVGP---IDYVFVDRAL-- 253 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 + T G SDH P+IV + P Sbjct: 254 QVLRFATLTDTEGGVAISDHFPIIVQIAAP 283 >gi|156387622|ref|XP_001634302.1| predicted protein [Nematostella vectensis] gi|156221383|gb|EDO42239.1| predicted protein [Nematostella vectensis] Length = 149 Score = 39.8 bits (91), Expect = 0.49, Method: Composition-based stats. Identities = 16/122 (13%), Positives = 36/122 (29%), Gaps = 9/122 (7%) Query: 149 IFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFW 208 ++ E L + T + H ++ Sbjct: 5 DMNAKVGDQNWDYERVMGKHGLGVRNDDGERLCELCDLNELVITGTLFPHRTLHKA-TWI 63 Query: 209 DYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268 D +KN+ IDH++++ + + R+ R SDH V ++ + + Sbjct: 64 S--PDGKTKNQ---IDHVLVNTRFRNSVKDTRVF---RSADVGSDHYLVCATVKLRLRKD 115 Query: 269 KQ 270 + Sbjct: 116 PK 117 >gi|291516299|emb|CBK69915.1| Metal-dependent hydrolase [Bifidobacterium longum subsp. longum F8] Length = 320 Score = 39.8 bits (91), Expect = 0.50, Method: Composition-based stats. Identities = 33/258 (12%), Positives = 66/258 (25%), Gaps = 43/258 (16%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTED--KNFPFETLQSLNYHIETCGQ 62 V T+NV +A + +++ +++ LQET TED K ++ + + Sbjct: 100 RVMTFNVYKGQADPQAIVELVRDQRVEVLALQET-TEDFVKKLNEAGIEHYLPYAQVSSS 158 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 G + S + + + + G Sbjct: 159 DGVFGNGLWSATPLADPTDDDVNSSASFMPGGTVDMGGQQIRFVSVHTTAPVPG------ 212 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 W + R + IF GD+N + + Sbjct: 213 ---YWRQWKRSLDELGLMREHTDTRYIFMGDFNATYDHTPFRDFL--------------- 254 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 +S+ A + G IDH++L ++ Sbjct: 255 ------GDRFVDAARESGHGFTFSWPTNRA-AVPMFAG--IDHVVLDQGM--KAGQCKVV 303 Query: 243 TKPRGWTKPSDHTPVIVS 260 SDH ++ + Sbjct: 304 KVE-----GSDHAALLAT 316 >gi|156357354|ref|XP_001624185.1| predicted protein [Nematostella vectensis] gi|156210945|gb|EDO32085.1| predicted protein [Nematostella vectensis] Length = 681 Score = 39.8 bits (91), Expect = 0.50, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 20/44 (45%), Gaps = 5/44 (11%) Query: 6 VATWNVNSIRARIHNLAAWI--KENNPD--IICLQETKTEDKNF 45 + TWNVN ++ + L W+ + PD ++ QE + Sbjct: 18 IGTWNVNG-KSPVEGLGPWLTCDDEAPDVVVVGFQELDLSTEAL 60 >gi|291441787|ref|ZP_06581177.1| polynucleotide adenyltransferase [Streptomyces ghanaensis ATCC 14672] gi|291344682|gb|EFE71638.1| polynucleotide adenyltransferase [Streptomyces ghanaensis ATCC 14672] Length = 973 Score = 39.8 bits (91), Expect = 0.50, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 11/45 (24%) Query: 4 VTVATWN----------VNSIRARIHNLAAWIKENNPDIICLQET 38 + V TWN +++ R R L A +++ + D+I LQE Sbjct: 148 LRVLTWNTLWDRYDSDRIDTAR-RRPLLLAALEDADADVIALQEV 191 >gi|239933421|ref|ZP_04690374.1| polynucleotide adenyltransferase [Streptomyces ghanaensis ATCC 14672] Length = 947 Score = 39.8 bits (91), Expect = 0.50, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 11/45 (24%) Query: 4 VTVATWN----------VNSIRARIHNLAAWIKENNPDIICLQET 38 + V TWN +++ R R L A +++ + D+I LQE Sbjct: 122 LRVLTWNTLWDRYDSDRIDTAR-RRPLLLAALEDADADVIALQEV 165 >gi|229143782|ref|ZP_04272202.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST24] gi|228639657|gb|EEK96067.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST24] Length = 788 Score = 39.8 bits (91), Expect = 0.50, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 22/44 (50%), Gaps = 3/44 (6%) Query: 223 IDHIMLSPEATSL--LHSARIDTKPRGWT-KPSDHTPVIVSLDI 263 +DHI+++ + S +++ + SDH PV+ +D+ Sbjct: 741 LDHILVTNNIAPHTIVDSVHLNSNIMKEHGRVSDHDPVLAQIDL 784 >gi|42523979|ref|NP_969359.1| hypothetical protein Bd2555 [Bdellovibrio bacteriovorus HD100] gi|39576187|emb|CAE80352.1| hypothetical protein Bd2555 [Bdellovibrio bacteriovorus HD100] Length = 343 Score = 39.8 bits (91), Expect = 0.50, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 27/73 (36%), Gaps = 18/73 (24%) Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLH--SARIDTK----------PRGWTK--- 250 +F+ S + G +ID + + P L SA + PR Sbjct: 268 TFYQVRNSSRAD--GRQIDFVFIPPLLHPYLKPASAHVHRYKDEFGMAHDIPRNMDAKLS 325 Query: 251 -PSDHTPVIVSLD 262 PSDH P++ ++ Sbjct: 326 LPSDHYPLVFEIE 338 >gi|319893216|ref|YP_004150091.1| Endonuclease/Exonuclease/phosphatase family protein [Staphylococcus pseudintermedius HKU10-03] gi|317162912|gb|ADV06455.1| Endonuclease/Exonuclease/phosphatase family protein [Staphylococcus pseudintermedius HKU10-03] Length = 623 Score = 39.4 bits (90), Expect = 0.51, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 28/66 (42%), Gaps = 10/66 (15%) Query: 200 DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS--LLHSARIDTKPRGWT-KPSDHTP 256 + YS+ Y ++ + +DHI++S L +++ + SDH P Sbjct: 553 PKNKRYSYV-YQGNTQT------LDHILVSEHLKRQTKLDMIHVNSDFTDMAGRASDHDP 605 Query: 257 VIVSLD 262 ++ +D Sbjct: 606 ILAQID 611 >gi|301121032|ref|XP_002908243.1| carbon catabolite repressor protein, putative [Phytophthora infestans T30-4] gi|262103274|gb|EEY61326.1| carbon catabolite repressor protein, putative [Phytophthora infestans T30-4] Length = 1180 Score = 39.4 bits (90), Expect = 0.51, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 1/44 (2%) Query: 17 RIHNLAAWIKENNPDIICLQETKTED-KNFPFETLQSLNYHIET 59 R L ++ N DIICLQE + + K+F ++ Y Sbjct: 281 RRELLKRELQSYNADIICLQEVQGDHYKSFFAPMMEEWGYEGWY 324 >gi|298204359|gb|ADI61828.1| endonuclease-reverse transcriptase [Bombyx mori] Length = 1011 Score = 39.4 bits (90), Expect = 0.51, Method: Composition-based stats. Identities = 28/273 (10%), Positives = 71/273 (26%), Gaps = 22/273 (8%) Query: 5 TVATWNVNSIRARIHNLAAWIKEN--NPD--IICLQETKTEDKNFPFETLQSLNYHIETC 60 + TWNV + ++ D I L ET + + + Sbjct: 63 KIGTWNVRGL--LKPGKIDIVEGEVTKCDLCICGLSETHWRNSG---HFFTENHAVYFSG 117 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + + + D +N +++ + Sbjct: 118 NDNDSQNGVAILVPRHRKNCVIGYEPVSDRIISMKLKASPVNLNLIQVYAPTSTALPEVL 177 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 Y + I + + + + N+ ++ E Sbjct: 178 ENFYRELQIVIAKVPNRELLVIMGDFNSKIGANSNL----YNNCVGKFGLGLRNERGERL 233 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 F + +++ H LY++ +N+ ID+I++ + + +A Sbjct: 234 MRFANENGLTVANSLFQHHPR-RLYTWTS--PGGKHRNQ---IDYILIRSRWRTSVLNAH 287 Query: 241 IDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDS 273 G SDH ++ + + + + Sbjct: 288 TLP---GACCGSDHELLVAKIRLKLKAARSPRA 317 >gi|147777454|emb|CAN73833.1| hypothetical protein VITISV_034783 [Vitis vinifera] Length = 1168 Score = 39.4 bits (90), Expect = 0.51, Method: Composition-based stats. Identities = 15/166 (9%), Positives = 44/166 (26%), Gaps = 7/166 (4%) Query: 94 FIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGD 153 T+ L +G + + + + EE G Sbjct: 576 ICWDKRTLELMELEVGCFSISCRMRNVEDGRVWMFTGVYGPFSKEEREWMWEELGAIRGI 635 Query: 154 YNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD 213 + +N + + + + ++ + + + ++ + Sbjct: 636 WEDPWCIGGDFNVTLSLRERSNQGRLTSAMRRFAQVVDELELIDLPLQGGMLTW----SG 691 Query: 214 SWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 + R+D +++ + PR SDH P+++ Sbjct: 692 GRNNQAWARLDRFLVTQGWLDHFNEVVQCRLPR---PTSDHFPIVL 734 >gi|322689757|ref|YP_004209491.1| hypothetical protein BLIF_1575 [Bifidobacterium longum subsp. infantis 157F] gi|320461093|dbj|BAJ71713.1| conserved hypothetical protein [Bifidobacterium longum subsp. infantis 157F] Length = 335 Score = 39.4 bits (90), Expect = 0.52, Method: Composition-based stats. Identities = 33/258 (12%), Positives = 66/258 (25%), Gaps = 43/258 (16%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTED--KNFPFETLQSLNYHIETCGQ 62 V T+NV +A + +++ +++ LQET TED K ++ + + Sbjct: 115 RVMTFNVYKGQADPQAIVELVRDQRVEVLALQET-TEDFVKKLNEAGIEHYLPYAQVSSS 173 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 G + S + + + + G Sbjct: 174 DGVFGNGLWSATPLADPTDDDVNSSASFMPGGTVDMGGQQIRFVSVHTTAPVPG------ 227 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 W + R + IF GD+N + + Sbjct: 228 ---YWRQWKRSLDELGLMREHTDTRYIFMGDFNATYDHTPFRDFL--------------- 269 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 +S+ A + G IDH++L ++ Sbjct: 270 ------GDRFVDAARESGHGFTFSWPTNRA-AVPMFAG--IDHVVLDQGM--KAGQCKVV 318 Query: 243 TKPRGWTKPSDHTPVIVS 260 SDH ++ + Sbjct: 319 KVE-----GSDHAALLAT 331 >gi|270005856|gb|EFA02304.1| hypothetical protein TcasGA2_TC007970 [Tribolium castaneum] Length = 505 Score = 39.4 bits (90), Expect = 0.52, Method: Composition-based stats. Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 24/94 (25%) Query: 6 VATWNV------------------NSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNF 45 V T+NV +S++ R +NL A I+ NPDI+CLQE ++ + Sbjct: 143 VMTYNVLAQDLVNQHPYLYALHRKDSLKWDTRWNNLLAEIRNLNPDILCLQEV--QNTHL 200 Query: 46 P--FETLQSLNYHIETCGQKSYNGVAILSKYQPI 77 F TL +L Y + Y+P Sbjct: 201 DQYFSTLDTLGYQGLYKQRTGPRTDGCAIYYKPH 234 >gi|225453594|ref|XP_002266993.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 453 Score = 39.4 bits (90), Expect = 0.52, Method: Composition-based stats. Identities = 17/118 (14%), Positives = 39/118 (33%), Gaps = 7/118 (5%) Query: 143 ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH 202 EE G + +N + + + + ++ + +R T Sbjct: 113 FWEELRAIRGLWEDPWCIGGDFNIVRFLKERRNAPRLTTEMRRFSEVIRDLGLRDFPLTG 172 Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 +++ + R+DH ++S + + T PR SDH P+++ Sbjct: 173 GHFTW----IGGLNSQAASRLDHFLVSDQWKDHFSAITQSTLPR---LVSDHNPIVLE 223 >gi|54023631|ref|YP_117873.1| hypothetical protein nfa16630 [Nocardia farcinica IFM 10152] gi|54015139|dbj|BAD56509.1| hypothetical protein [Nocardia farcinica IFM 10152] Length = 329 Score = 39.4 bits (90), Expect = 0.52, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 22/59 (37%), Gaps = 12/59 (20%) Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 ++ +W G IDH++++ + S I SDH V L +P Sbjct: 282 TWPADR--AWGPVIG--IDHVLVADGGAGRVESITI--------PGSDHRAVYAELRLP 328 >gi|67526289|ref|XP_661206.1| hypothetical protein AN3602.2 [Aspergillus nidulans FGSC A4] gi|74596539|sp|Q5B778|CCR4_EMENI RecName: Full=Glucose-repressible alcohol dehydrogenase transcriptional effector; AltName: Full=Carbon catabolite repressor protein 4; AltName: Full=Cytoplasmic deadenylase gi|40740620|gb|EAA59810.1| hypothetical protein AN3602.2 [Aspergillus nidulans FGSC A4] gi|259481873|tpe|CBF75800.1| TPA: Glucose-repressible alcohol dehydrogenase transcriptional effector (EC 3.1.13.4)(Carbon catabolite repressor protein 4)(Cytoplasmic deadenylase) [Source:UniProtKB/Swiss-Prot;Acc:Q5B778] [Aspergillus nidulans FGSC A4] Length = 675 Score = 39.4 bits (90), Expect = 0.52, Method: Composition-based stats. Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 5/34 (14%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQET 38 V +W R + ++ ++PDIICLQE Sbjct: 333 RVLSW-----EFRRETILNELRAHDPDIICLQEI 361 >gi|329934913|ref|ZP_08284954.1| putative membrane protein [Streptomyces griseoaurantiacus M045] gi|329305735|gb|EGG49591.1| putative membrane protein [Streptomyces griseoaurantiacus M045] Length = 346 Score = 39.4 bits (90), Expect = 0.52, Method: Composition-based stats. Identities = 45/261 (17%), Positives = 72/261 (27%), Gaps = 47/261 (18%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTED-KNFPFETLQSLNYHIETCGQ 62 +TVAT NVN+ A A I D++ LQE K + + YH Sbjct: 129 LTVATHNVNASNADPSGTAREIAVAGADVLALQELKASAVPTYERLLEPTYKYHAVV--- 185 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 V + SK+ + T R + AT T L + +LP Sbjct: 186 ---GTVGLWSKFPMSGVRTVDIRLGW---KRAMRATVTTPDGPLAVYVAHLPSVRVKLRA 239 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + A+ E + ++ D N + Sbjct: 240 GFTARERDRSADALGAAIAHEKQSRVVLLADANGTMNDRALTAVTSQMRSTQGAVGSGF- 298 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 +S+ + + RID IM+ S+ Sbjct: 299 ---------------------GFSWPASFPMA-------RIDQIMV-KGVKP--VSSWTL 327 Query: 243 TKPRGWTKPSDHTPVIVSLDI 263 K SDH P+ L + Sbjct: 328 PKT-----GSDHLPIAARLQL 343 >gi|115745149|ref|XP_001203234.1| PREDICTED: similar to endonuclease/reverse transcriptase [Strongylocentrotus purpuratus] gi|115914182|ref|XP_001177305.1| PREDICTED: similar to endonuclease/reverse transcriptase [Strongylocentrotus purpuratus] Length = 858 Score = 39.4 bits (90), Expect = 0.53, Method: Composition-based stats. Identities = 38/270 (14%), Positives = 76/270 (28%), Gaps = 46/270 (17%) Query: 5 TVAT-WNVN--SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 V T NVN SIRA+ + A I ++NPD++ E+ + E + +Y+IE Sbjct: 137 KVLTILNVNCQSIRAKKQSFAILIHQHNPDVVIGTESWLTEDIRSSEVFPTDHYNIERRD 196 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 + + H + + T I G Sbjct: 197 RPNDP---------------HGGVFLAIRKDLLASREIELETDCELIWCKISMPGAKTLH 241 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + +R + P + + + Sbjct: 242 VAAFYRPHEGDEMSLTELER----------SLSRLSPTHSVVIGGDLNLPGWDWRNQQVG 291 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 + + ++ H + + + +N +D +++S + Sbjct: 292 NCRYPNLHRRLGSLLDDHGLTQVVT-----EPTRYQNT---LDLLLVSNP--------TV 335 Query: 242 DTKPRGWTKPSDH-TPVIVSLDIPEPRKKQ 270 + SDH P+ V LD+ R+ Q Sbjct: 336 VNEVTVVPGVSDHDCPL-VKLDVRPTRRHQ 364 >gi|1448963|gb|AAB04627.1| reverse transcriptase [Chironomus tentans] Length = 755 Score = 39.4 bits (90), Expect = 0.53, Method: Composition-based stats. Identities = 29/270 (10%), Positives = 59/270 (21%), Gaps = 42/270 (15%) Query: 9 WNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGV 68 WN N + ++ ++ D+ C+ ET + P + S ++ + Sbjct: 12 WNANGLTDKMLAFLDYLSTQKVDVACISETFLK----PNSKIDSHPDYVIHRFDRVDRPK 67 Query: 69 AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKI 128 ++ + L I I G Sbjct: 68 GGVAIIVKRNLKHQLQPSYNTKLMECIGIKVFITDSVSCHILSVYLPGGSKGKEIDQHLR 127 Query: 129 SWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN 188 I + GD+N + +C N A L+ + Sbjct: 128 DDINKITNIRG-------NYYICGDFNAKHREWNCNV----ANKAGTILQDMSGEFMIYY 176 Query: 189 MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGW 248 ID ++ + + + Sbjct: 177 PDSPTYYPEDPKKSEST-----------------IDLMLSNSNLETTELNCT-------- 211 Query: 249 TKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278 SDH V I + + ++T Sbjct: 212 EAMSDHCAVY--FQIKTSKIDRTENTVYRY 239 >gi|329115285|ref|ZP_08244040.1| Hypothetical protein APO_2103 [Acetobacter pomorum DM001] gi|326695728|gb|EGE47414.1| Hypothetical protein APO_2103 [Acetobacter pomorum DM001] Length = 139 Score = 39.4 bits (90), Expect = 0.53, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 11/57 (19%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRG-------WTKPSDHTPVIVSLDIPEPRKKQQD 272 IDHI+L A + +I R SDH PV ++L +P +++ Q Sbjct: 87 IDHIILGGAARAW----KIPNSLRVTPLAEEVGQTLSDHCPVSITLQLPSAKEQPQP 139 >gi|325568346|ref|ZP_08144713.1| RgfB protein [Enterococcus casseliflavus ATCC 12755] gi|325158115|gb|EGC70268.1| RgfB protein [Enterococcus casseliflavus ATCC 12755] Length = 276 Score = 39.4 bits (90), Expect = 0.54, Method: Composition-based stats. Identities = 36/286 (12%), Positives = 73/286 (25%), Gaps = 45/286 (15%) Query: 4 VTVATWNVNSIRARIHNLAAWIKEN---------------NPDIICLQETK--------T 40 + V T N +S W++EN + DII LQE Sbjct: 1 MKVLTLNTHS----------WLEENQLEKCKMIAQEIATGDYDIIALQEVNQTIAAQTIV 50 Query: 41 EDKNF-PFE---TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIE 96 D + P + ++ N+ + + + + + + + ++ Sbjct: 51 PDGLYCPTDTLVEIKEDNFALRLVEELQLLDCDYYWSWTYSHVGYDIYHEGNALLSKQPI 110 Query: 97 ATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI 156 + N T+ D +I + Q + + Sbjct: 111 IAKEYLASQATDVWDHTTRKNLSGVTEADGQIVQVVSCHFSWWQDGKFAYEWQQTEAFLA 170 Query: 157 IPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS 216 + A ++ F A T + + D W Sbjct: 171 ERADTLLILGDFNNDAASSGHQLVLDSSLQLQDSFLTAAETTGEASVV-----KAIDGWQ 225 Query: 217 KNK-GIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 N+ +RID++ S + + SDH + V Sbjct: 226 DNREALRIDYVFASKDL--QATEYEVVFDGTRTPIVSDHFGIKVVF 269 >gi|321453655|gb|EFX64870.1| hypothetical protein DAPPUDRAFT_333741 [Daphnia pulex] Length = 176 Score = 39.4 bits (90), Expect = 0.54, Method: Composition-based stats. Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 2/37 (5%) Query: 4 VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQET 38 + V + N+ I R+ L + N D+ICLQE Sbjct: 1 MKVTSINIARISTPERLQLLLNYCVSNEFDVICLQEV 37 >gi|223985092|ref|ZP_03635188.1| hypothetical protein HOLDEFILI_02493 [Holdemania filiformis DSM 12042] gi|223962914|gb|EEF67330.1| hypothetical protein HOLDEFILI_02493 [Holdemania filiformis DSM 12042] Length = 662 Score = 39.4 bits (90), Expect = 0.54, Method: Composition-based stats. Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 3/39 (7%) Query: 2 SVVTVATWNVNSIRAR--IHNLAAWIKENNPDIICLQET 38 + + VATWN++S +A I ++ I E +I+ QE Sbjct: 56 TTMRVATWNIDS-KAHPDIKEMSNIIHERGIEIMGFQEI 93 >gi|242817518|ref|XP_002486972.1| endonuclease/exonuclease/phosphatase family protein [Talaromyces stipitatus ATCC 10500] gi|218713437|gb|EED12861.1| endonuclease/exonuclease/phosphatase family protein [Talaromyces stipitatus ATCC 10500] Length = 334 Score = 39.4 bits (90), Expect = 0.54, Method: Composition-based stats. Identities = 33/258 (12%), Positives = 65/258 (25%), Gaps = 31/258 (12%) Query: 32 IICLQET-KTEDKNF----PFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGD 86 ICLQE + ++ + G+ S + L Sbjct: 85 FICLQEVLHVQLEDILGGLTQAAKAEEQWAYIGVGRDDGEKQGEYSPIIYQPVTWQLHHW 144 Query: 87 DLDVQARFIE----ATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRL 142 + + E + +T+ + IG R A++ + Sbjct: 145 ETVWLSETPEKPSKSWDAASTRIVTIGVFRHRATGKFLLVLNTHLDDQGPRSRYEAARII 204 Query: 143 ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH 202 + G Y+ + + L + + Sbjct: 205 LGKINGYLDGSYDETISGVVLAGDFNSQETQEAYQTLTAKESILVDSQKITKATEHYGNE 264 Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSP-------------EATSLLHSARIDTKPRGWT 249 ++ + Y RID+I+L P + ++R D Sbjct: 265 ITWTGFGY-----EDEPKSRIDYILLGPVDKSSDEPHHRWNSIGYAVLASRFDDGV---- 315 Query: 250 KPSDHTPVIVSLDIPEPR 267 SDH V+V D+ +P Sbjct: 316 WNSDHRAVVVDADLADPS 333 >gi|147853091|emb|CAN81282.1| hypothetical protein VITISV_037391 [Vitis vinifera] Length = 1449 Score = 39.4 bits (90), Expect = 0.54, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 8/46 (17%) Query: 2 SVVTV--ATWNVNSIRA----RIHNLAAWIKENNPDIICLQETKTE 41 S++ + +WNV RA + + A I+ D+ LQETK Sbjct: 480 SLMKIRLLSWNVR--RANDSSKRKLIKALIRNQRVDLFRLQETKIH 523 >gi|148272370|ref|YP_001221931.1| putative membrane protein with hydrolase activity [Clavibacter michiganensis subsp. michiganensis NCPPB 382] gi|147830300|emb|CAN01234.1| putative membrane protein with hydrolase activity [Clavibacter michiganensis subsp. michiganensis NCPPB 382] Length = 345 Score = 39.4 bits (90), Expect = 0.54, Method: Composition-based stats. Identities = 47/268 (17%), Positives = 72/268 (26%), Gaps = 45/268 (16%) Query: 4 VTVATWN----VNSIRARIHNLAAWIKENNPDIICLQETK----TEDKNFPFETLQSLNY 55 VTV TWN RA +A E+ D+I L ET+ E + + + Sbjct: 109 VTVLTWNTLGGATGARA----VADLAIESGADVITLPETREETGAEIAVLMRDAGRPMWV 164 Query: 56 HIETCGQ--KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 + + ++S + G + +E + + + Sbjct: 165 RTAAFDDVAAARSTTILISAAYGDYRMDESRGTTSVLPTVIMEPVDGNGPVIMAVHPVSP 224 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + R + E +I AGD+N Y E D Sbjct: 225 IP-----------EQMDNWRADLAWLGQRCDEGNVIIAGDFNATLDHMSRYGGAPTERDQ 273 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 L + G G IDHIM +P Sbjct: 274 VTDLGKCVDAGRASGNGAVGTWPTGLPAL----------------LGTPIDHIMATPGWA 317 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + R+ G SDH PVI L Sbjct: 318 --VTGFRVVEDRDGA--GSDHRPVIAQL 341 >gi|330833582|ref|YP_004402407.1| DNA nuclease [Streptococcus suis ST3] gi|329307805|gb|AEB82221.1| DNA nuclease [Streptococcus suis ST3] Length = 1039 Score = 39.4 bits (90), Expect = 0.54, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 41/93 (44%), Gaps = 18/93 (19%) Query: 192 TDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL-------LHSARIDTK 244 + + HD +S++ Y ++ S +D++++S ++SA ++ Sbjct: 867 MANLVSRHDASDRFSYF-YNGNNQS------LDNMLVSTNLLDRYAFDMVHVNSAFMEEH 919 Query: 245 PRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQN 277 R SDH P++V LD+ + ++ Q S Sbjct: 920 GR----ASDHDPLLVQLDVTKAQEPTQPEPSDK 948 >gi|321453147|gb|EFX64413.1| hypothetical protein DAPPUDRAFT_118205 [Daphnia pulex] Length = 367 Score = 39.4 bits (90), Expect = 0.54, Method: Composition-based stats. Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 2/37 (5%) Query: 4 VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQET 38 + V + N+ I R+ L + N D+ICLQE Sbjct: 1 MKVTSINIARISTPERLQLLLNYCVSNEFDVICLQEV 37 >gi|218437404|ref|YP_002375733.1| endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 7424] gi|218170132|gb|ACK68865.1| Endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 7424] Length = 1073 Score = 39.4 bits (90), Expect = 0.54, Method: Composition-based stats. Identities = 8/41 (19%), Positives = 19/41 (46%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +DHI++S + + + + SDH P++ ++ Sbjct: 884 LDHILVSDNLLNSAEFDIVHINSQFADQTSDHDPLLARFNL 924 >gi|169787278|gb|ACA80078.1| putative DNA lyase [Colletotrichum caudatum] Length = 233 Score = 39.4 bits (90), Expect = 0.54, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 22/57 (38%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81 + DI+ +QETK + K+ + + + + K G + ++ Y Sbjct: 2 FEILEADIVVMQETKIQRKDLQDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATCC 58 >gi|169787224|gb|ACA80051.1| putative DNA lyase [Colletotrichum caudatum] Length = 233 Score = 39.4 bits (90), Expect = 0.54, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 22/57 (38%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81 + DI+ +QETK + K+ + + + + K G + ++ Y Sbjct: 2 FEILEADIVVMQETKIQRKDLQDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATCC 58 >gi|223933529|ref|ZP_03625511.1| LPXTG-motif cell wall anchor domain protein [Streptococcus suis 89/1591] gi|223897789|gb|EEF64168.1| LPXTG-motif cell wall anchor domain protein [Streptococcus suis 89/1591] Length = 651 Score = 39.4 bits (90), Expect = 0.54, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 41/93 (44%), Gaps = 18/93 (19%) Query: 192 TDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL-------LHSARIDTK 244 + + HD +S++ Y ++ S +D++++S ++SA ++ Sbjct: 479 MANLVSRHDASDRFSYF-YNGNNQS------LDNMLVSTNLLDRYAFDMVHVNSAFMEEH 531 Query: 245 PRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQN 277 R SDH P++V LD+ + ++ Q S Sbjct: 532 GR----ASDHDPLLVQLDVTKAQEPTQPEPSDK 560 >gi|307591319|ref|YP_003900118.1| endonuclease I [Cyanothece sp. PCC 7822] gi|306986173|gb|ADN18052.1| Endonuclease I [Cyanothece sp. PCC 7822] Length = 573 Score = 39.4 bits (90), Expect = 0.54, Method: Composition-based stats. Identities = 21/92 (22%), Positives = 33/92 (35%), Gaps = 13/92 (14%) Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT----SLLHSARIDTKPRGW 248 + + YSF + N+ + ID I++S + + ++ G Sbjct: 258 ENLTEKIPLAERYSFI------FKGNREL-IDQILVSENLASGGQPEIKAVHVNAGKPG- 309 Query: 249 TKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 + SDH PVI S I K S N P Sbjct: 310 -RASDHDPVIASFTIFPSSKVVIPPVSANDAP 340 >gi|255943518|ref|XP_002562527.1| Pc19g00360 [Penicillium chrysogenum Wisconsin 54-1255] gi|211587261|emb|CAP79452.1| Pc19g00360 [Penicillium chrysogenum Wisconsin 54-1255] Length = 294 Score = 39.4 bits (90), Expect = 0.54, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 16/47 (34%), Gaps = 4/47 (8%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKK 269 ID ++ S + I G SDH + D P P K Sbjct: 30 IDLVLASENLADSMTKCAIL----GTDHGSDHDAIETVFDAPWPIPK 72 >gi|149634120|ref|XP_001506672.1| PREDICTED: similar to laminin beta 2-like chain [Ornithorhynchus anatinus] Length = 1850 Score = 39.4 bits (90), Expect = 0.54, Method: Composition-based stats. Identities = 14/162 (8%), Positives = 32/162 (19%), Gaps = 7/162 (4%) Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 C G + + + + + + G Sbjct: 1061 CYCDRITGHCSCRPHVLGRNCDRCAPNFWNFGGTHGCEPCSCHPTRSLHLSCNTFTGQCH 1120 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + + + + LE + P+ + Sbjct: 1121 CRAGFGGRTCSHCQEGYWGDPELE-------CRACDCDPRGSESLQCHRLTGRCSCREGF 1173 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI 221 S + GF D+ H ++ WD K+ Sbjct: 1174 TGSRCSVCTRGFQDSFPHCPPCHPCFTHWDQQLGLLRKHLAW 1215 >gi|149199822|ref|ZP_01876852.1| hypothetical protein LNTAR_23729 [Lentisphaera araneosa HTCC2155] gi|149137110|gb|EDM25533.1| hypothetical protein LNTAR_23729 [Lentisphaera araneosa HTCC2155] Length = 271 Score = 39.4 bits (90), Expect = 0.54, Method: Composition-based stats. Identities = 32/242 (13%), Positives = 68/242 (28%), Gaps = 42/242 (17%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLP 84 I+ + D++ LQE + +H + A S+ E V Sbjct: 66 IQASPVDLLALQE-----------AEAEMTWHKNLHQSQFLAEQAGFSQVAQGEHVRGKR 114 Query: 85 GDDLD----VQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQ 140 + L ++ K+ IS FL ++ Sbjct: 115 YSYGTAVLSKLKIVHSESHVFPRSKLTFPKGFVSAEVISHCQKHFRVISLHLDFLHEKTR 174 Query: 141 RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHD 200 + +++ + + +P + + L+ + ++ + Sbjct: 175 QRQIQMLCNYIQNQAPLPLIIMGDFNCQYRKNGV-----------LERLAQELNLQVWNP 223 Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 + SF G+R+D I++S E +S + SDH V Sbjct: 224 QEKIVSF---------PKLGLRLDWILISQEM--RFNSYELWDDL-----ASDHLAVRAE 267 Query: 261 LD 262 L+ Sbjct: 268 LE 269 >gi|303324261|ref|XP_003072118.1| Endonuclease/Exonuclease/phosphatase family protein [Coccidioides posadasii C735 delta SOWgp] gi|240111828|gb|EER29973.1| Endonuclease/Exonuclease/phosphatase family protein [Coccidioides posadasii C735 delta SOWgp] Length = 343 Score = 39.4 bits (90), Expect = 0.55, Method: Composition-based stats. Identities = 37/279 (13%), Positives = 74/279 (26%), Gaps = 44/279 (15%) Query: 6 VATWNVNS------IRARIHNLAAWIKENNP--DIICLQE-TKTEDKNFPFETLQSLNYH 56 + TWN+N IR + I++ P D+I LQE T+T L ++ + Sbjct: 70 LVTWNINGTDLAPDIRTSA--IITHIRDMRPVMDVIFLQEVTRTT-----LSVLLAMPWV 122 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 E + + I T + R+ Sbjct: 123 REQWYSSEADATSWG----HQSISTMMLLSKSRFHGLKRTPERAALGAVWRVPFPSHFGR 178 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN----- 171 + + + + + + + I P II Sbjct: 179 DALCCDIFLPICNPSECKKSVPGSHARIRLVNVHLDSLAIQPSYRPRQLSIIASYLRATG 238 Query: 172 ----DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI- 226 F + + + D H +++ ++ N R+D + Sbjct: 239 RGLVAGDFNPVLPEDDSIINENNLVDMWTELHPNDPGFTWGIDGKQAYPAN---RLDKVA 295 Query: 227 ----------MLSPEATSLLHSARIDTKPRGWTKPSDHT 255 ++ P + ++A + R K SDH Sbjct: 296 KLGLKTHEIEVIPPGTCTYAYAAENRPEER-EHKWSDHC 333 >gi|169787300|gb|ACA80089.1| putative DNA lyase [Colletotrichum miscanthi] Length = 233 Score = 39.4 bits (90), Expect = 0.55, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 22/57 (38%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81 + DI+ +QETK + K+ + + + + K G + ++ Y Sbjct: 2 FEILEADIVVIQETKIQRKDLHDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATCC 58 >gi|147841954|emb|CAN67512.1| hypothetical protein VITISV_026954 [Vitis vinifera] Length = 793 Score = 39.4 bits (90), Expect = 0.55, Method: Composition-based stats. Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 2/36 (5%) Query: 4 VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQE 37 + + +WNV + A IK+ D++CLQE Sbjct: 136 LRLLSWNVRGANDYEKRKVIKALIKDQKVDLVCLQE 171 >gi|126735526|ref|ZP_01751271.1| Endonuclease/exonuclease/phosphatase [Roseobacter sp. CCS2] gi|126714713|gb|EBA11579.1| Endonuclease/exonuclease/phosphatase [Roseobacter sp. CCS2] Length = 326 Score = 39.4 bits (90), Expect = 0.55, Method: Composition-based stats. Identities = 32/252 (12%), Positives = 69/252 (27%), Gaps = 52/252 (20%) Query: 15 RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS--LNYH-IETCGQKSYNGVAIL 71 R +L I+ +PD++ L ET E L+S Y +++ + + G+ Sbjct: 110 NTRYDDLINIIEREDPDVLLLMET----DALWAEALESTLARYATVKSYIEDDHYGMIFA 165 Query: 72 SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWI 131 ++ + P DD + I + P T T+ + Sbjct: 166 TRLDVVSTEFIWPIDDDTPAVKAILRAPNGPEFNFIGLHPRPPVPGNDTETRDRQIKNAA 225 Query: 132 KRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191 + + + + + E + G Sbjct: 226 LMTSSMDRPTICMGDFNDVSWSW-----------------TTKRFKEYGNFREPRIGRGM 268 Query: 192 TDAIRATHDTHHLYSFWDYYADSWSKNKGIR--IDHIMLSPEATSLLHSARIDTKPRGWT 249 + A + +R ID + ++ + + + R Sbjct: 269 ISSFHADYPF-------------------MRLPIDQLFVTE-------NVGLVSFARLEN 302 Query: 250 KPSDHTPVIVSL 261 SDH P+I ++ Sbjct: 303 FGSDHFPMIATI 314 >gi|114707796|ref|ZP_01440690.1| hypothetical protein FP2506_17604 [Fulvimarina pelagi HTCC2506] gi|114536785|gb|EAU39915.1| hypothetical protein FP2506_17604 [Fulvimarina pelagi HTCC2506] Length = 244 Score = 39.4 bits (90), Expect = 0.55, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 5/40 (12%) Query: 4 VTVATWNVNSI----RAR-IHNLAAWIKENNPDIICLQET 38 + T+N++S R R + A I + D++ LQE Sbjct: 1 MRFVTYNIHSCLGTDRRRDPDRIGAVISDLRADVVALQEV 40 Score = 39.4 bits (90), Expect = 0.64, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 18/40 (45%), Gaps = 3/40 (7%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 +DH + + SA + P + SDH P+++ D Sbjct: 202 LDHCFFRGDL--KVRSAYVVRSPL-VRRASDHLPLVIDFD 238 >gi|242068817|ref|XP_002449685.1| hypothetical protein SORBIDRAFT_05g021596 [Sorghum bicolor] gi|241935528|gb|EES08673.1| hypothetical protein SORBIDRAFT_05g021596 [Sorghum bicolor] Length = 649 Score = 39.4 bits (90), Expect = 0.56, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 18/51 (35%), Gaps = 10/51 (19%) Query: 1 MSVVTVATWNVNSI------RARIHNLAAWIKENNPDIICLQETKTEDKNF 45 V +WNV + P +ICLQE+K +D N Sbjct: 501 FRTFNVLSWNVCGLGDLDKCNLVRSVFLDV----KPSVICLQESKLDDINL 547 >gi|169787288|gb|ACA80083.1| putative DNA lyase [Glomerella tucumanensis] Length = 233 Score = 39.4 bits (90), Expect = 0.56, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 22/57 (38%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81 + DI+ +QETK + K+ + + + + K G + ++ Y Sbjct: 2 FEILEADIVVMQETKIQRKDLHDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATCC 58 >gi|169787228|gb|ACA80053.1| putative DNA lyase [Glomerella tucumanensis] gi|169787280|gb|ACA80079.1| putative DNA lyase [Glomerella tucumanensis] Length = 233 Score = 39.4 bits (90), Expect = 0.56, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 22/57 (38%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81 + DI+ +QETK + K+ + + + + K G + ++ Y Sbjct: 2 FEILEADIVVMQETKIQRKDLHDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATCC 58 >gi|169787216|gb|ACA80047.1| putative DNA lyase [Colletotrichum caudatum] gi|169787218|gb|ACA80048.1| putative DNA lyase [Colletotrichum caudatum] Length = 233 Score = 39.4 bits (90), Expect = 0.56, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 22/57 (38%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81 + DI+ +QETK + K+ + + + + K G + ++ Y Sbjct: 2 FEILEADIVVMQETKIQRKDLHDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATCC 58 >gi|147768164|emb|CAN71649.1| hypothetical protein VITISV_003282 [Vitis vinifera] Length = 1021 Score = 39.4 bits (90), Expect = 0.56, Method: Composition-based stats. Identities = 26/229 (11%), Positives = 55/229 (24%), Gaps = 32/229 (13%) Query: 33 ICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQA 92 +C+QETK + GV L Sbjct: 312 LCIQETKMQ---------------------VMSEGVVRSLGSGRFLNWRALNAIGSVGGV 350 Query: 93 RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG 152 + G + + + EE G Sbjct: 351 LICWDKRLLEILEWEEGQFSISCRLRNVEDGVVWVFMGVYGPFSREERECLWEEIGAIGG 410 Query: 153 DYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYA 212 + +N I+++++ + + ++ + + +++ Sbjct: 411 LWEEPWCLGGDFNTILYQSERSRNGRITSAMRRFAQIIDDLGLVDLPLQGGSFTW----- 465 Query: 213 DSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKP-SDHTPVIV 259 N+ R+D + +P R +P SDH PVI+ Sbjct: 466 SGGLNNQSWARLDRFLATPSWFDQYSRVS----QRRLPRPTSDHFPVIL 510 >gi|281338990|gb|EFB14574.1| hypothetical protein PANDA_021039 [Ailuropoda melanoleuca] Length = 114 Score = 39.4 bits (90), Expect = 0.56, Method: Composition-based stats. Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 12/107 (11%) Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 E L M TD +R Y F+ ++S RIDHI+ Sbjct: 14 KQKINKETMTLNNTLDQMDKTDILRTFLPRATEYMFFSSVHGTFS-----RIDHILGHKS 68 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278 + +I + + SDH + L++ +K + + + + Sbjct: 69 GLNKYKKIKIISS-----RFSDHKA--MKLEVNHRKKFGKTTNTWRL 108 >gi|147844432|emb|CAN82094.1| hypothetical protein VITISV_031210 [Vitis vinifera] Length = 1501 Score = 39.4 bits (90), Expect = 0.57, Method: Composition-based stats. Identities = 11/62 (17%), Positives = 22/62 (35%), Gaps = 11/62 (17%) Query: 201 THHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKP-SDHTPVI 258 +++ N+ R+D + +P R ++P SDH PV+ Sbjct: 697 QGGSFTW-----SGGLNNQSWARLDRFLATPSWLDQYSRV----HQRRLSRPTSDHFPVL 747 Query: 259 VS 260 + Sbjct: 748 LE 749 >gi|323497286|ref|ZP_08102305.1| metal-dependent hydrolase [Vibrio sinaloensis DSM 21326] gi|323317643|gb|EGA70635.1| metal-dependent hydrolase [Vibrio sinaloensis DSM 21326] Length = 232 Score = 39.4 bits (90), Expect = 0.58, Method: Composition-based stats. Identities = 28/237 (11%), Positives = 59/237 (24%), Gaps = 15/237 (6%) Query: 31 DIICLQETKTEDKNFPFETLQSLNYHIET--CGQKSYNGVAILSKYQPIEIVTHLPGDDL 88 D++ QE + + + Y I Q+ + Q + Sbjct: 4 DVLAFQEV---NDEAALQKVIGKGYDIVFSDRTQERHTEKRFHDINQFTGVAIKHGISWQ 60 Query: 89 DVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPL 148 ++ ++ + + PI K + R+ ++ Sbjct: 61 NMPDVLLDQRSNSKLRFATYVVIQPNSERPIHLLSVHLKARCSGAYKNNRDCRILKQQGE 120 Query: 149 IFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFW 208 N + Y + N Q+ A + T + Sbjct: 121 RLNQWINEKEVANQAYVILGDFNHNLSYPNDWLWNTLTQSNRAQLATQRTRAECKV---- 176 Query: 209 DYYADSWSKNKGI-R--IDHIMLSPEATSLLHSARIDTKPRGWT-KPSDHTPVIVSL 261 + R IDHI++S + + + + SDH P+ L Sbjct: 177 --RSRKQPNKTHSFRSLIDHIIVSDQIKLSAPKQDVYPSQQVLKHQLSDHCPITAQL 231 >gi|308478180|ref|XP_003101302.1| hypothetical protein CRE_14091 [Caenorhabditis remanei] gi|308264007|gb|EFP07960.1| hypothetical protein CRE_14091 [Caenorhabditis remanei] Length = 1212 Score = 39.4 bits (90), Expect = 0.58, Method: Composition-based stats. Identities = 37/252 (14%), Positives = 68/252 (26%), Gaps = 45/252 (17%) Query: 10 NVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVA 69 N NSI ++ L + N D+ CL ETK D +F L + + ++ +G Sbjct: 298 NCNSISNKLSKLDLLCEYYNFDVFCLSETKL-DNSFTDSLLSINDNYSILRKDRNRHGGG 356 Query: 70 ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKIS 129 + + A T+RI Y P+ ST +D Sbjct: 357 VGILIAKHIRFVPVDLPASSQSAEVCAIDIFAGGTTIRIITAYHPNHGHSKSTLFD---- 412 Query: 130 WIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNM 189 L + + GD+N+ + + ++ Q++ Sbjct: 413 -------TLEYLLIPGKHTVLLGDFNMPCIDWN--LLSAPDKACADFVDFVVKHGLTQSV 463 Query: 190 GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT 249 + +D + + I + Sbjct: 464 KSPTRFNPENI----------------------LDLCL---------SNTGIISDVSVGD 492 Query: 250 KPSDHTPVIVSL 261 SDH + V L Sbjct: 493 LFSDHCLIKVVL 504 >gi|262382995|ref|ZP_06076132.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|262295873|gb|EEY83804.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] Length = 305 Score = 39.4 bits (90), Expect = 0.58, Method: Composition-based stats. Identities = 38/299 (12%), Positives = 71/299 (23%), Gaps = 56/299 (18%) Query: 4 VTVATWNV-----------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52 + VAT+N+ N R +A I+ + DI QE K + Sbjct: 23 MVVATYNLRNANAGDSTNGNGWGQRYPYIAQLIQFHGFDIFGTQEGKYQ--QLQDLKNVM 80 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL-RIGNL 111 Y G+ S + + + + L RI Sbjct: 81 PGYDYIGVGRDDGKQAGEHSAIFYRKEKFEVLDHGDFWLSTITDRPNKGWDAVLPRICTW 140 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 T + + + E + P N Sbjct: 141 GKFRDKQTGFTFLFFNL-----HMDHIGVQARAESAKLILKKLKEFP-EKLPAILTGDFN 194 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK--GIRIDHIMLS 229 + + + +++ ++ RIDH+ L+ Sbjct: 195 VDQHNESYLLLDNSGIMRDSYQIADFRYVPNGTF-------NAFHADRKTDSRIDHLFLT 247 Query: 230 PEATSLLHSARIDTK-PRGWTK------------------------PSDHTPVIVSLDI 263 E + + T R K PSDH PV++ +++ Sbjct: 248 KEFD--VKKYGVLTDSYRSEAKESTEKEQNANFPKEVSMQKYVARTPSDHFPVMIVVEV 304 >gi|308806584|ref|XP_003080603.1| Endonuclease/exonuclease/phosphatase (ISS) [Ostreococcus tauri] gi|116059064|emb|CAL54771.1| Endonuclease/exonuclease/phosphatase (ISS) [Ostreococcus tauri] Length = 546 Score = 39.4 bits (90), Expect = 0.58, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 25/61 (40%), Gaps = 9/61 (14%) Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 Y++ + + +D+I++S L SA I SDH P++ +D Sbjct: 276 DRYTWRSGSSKAK-------LDYILVSRSDFD-LVSASIQHD-LVNASVSDHFPLLAIVD 326 Query: 263 I 263 + Sbjct: 327 V 327 >gi|238755079|ref|ZP_04616426.1| hypothetical protein yruck0001_22720 [Yersinia ruckeri ATCC 29473] gi|238706639|gb|EEP99009.1| hypothetical protein yruck0001_22720 [Yersinia ruckeri ATCC 29473] Length = 266 Score = 39.4 bits (90), Expect = 0.59, Method: Composition-based stats. Identities = 11/55 (20%), Positives = 22/55 (40%), Gaps = 12/55 (21%) Query: 209 DYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 D + ++ G +D++ E + A + T+ SDH P+ V + Sbjct: 224 DNRSRAF----GRPLDYVFY-REL--KVADAEVL-----VTRASDHNPLWVEFKL 266 >gi|189461476|ref|ZP_03010261.1| hypothetical protein BACCOP_02135 [Bacteroides coprocola DSM 17136] gi|189431810|gb|EDV00795.1| hypothetical protein BACCOP_02135 [Bacteroides coprocola DSM 17136] Length = 514 Score = 39.4 bits (90), Expect = 0.59, Method: Composition-based stats. Identities = 18/138 (13%), Positives = 38/138 (27%), Gaps = 9/138 (6%) Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYN-IIPQPHDCYNPIIWENDACFT 176 I + + +E+ + + + + I EN Sbjct: 141 YIAADWLHHFPVAKCALEHGKNVAVEVPSAMNLKECWALVNLSETSRKHCFILENCCYDW 200 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDY-YADSWSKNKGIRIDH-------IML 228 E+ Q + H+L +FWDY + + G R+D+ + Sbjct: 201 FEMNTLNMAQQGVLGEVIRAQGAYIHNLEAFWDYYWKNGKEDKLGWRLDYNMRHRGDVYA 260 Query: 229 SPEATSLLHSARIDTKPR 246 + + + I R Sbjct: 261 THGLGPVAQALDIHRGDR 278 >gi|33465891|gb|AAQ19327.1| bZIP-like protein [Oryza sativa Japonica Group] Length = 2367 Score = 39.4 bits (90), Expect = 0.59, Method: Composition-based stats. Identities = 22/175 (12%), Positives = 56/175 (32%), Gaps = 14/175 (8%) Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 + L P + ++ R S + + I + + Sbjct: 820 YVQLSPEEPQWHVTFVYGEPRVENRHRMWSLLRTIHQSSSLPWAV-IGDFNETMWQFEHF 878 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 +++ LQ+ D +D + W +N +R+D ++ Sbjct: 879 SRTPRGEPQMQDFRDVLQDCELHDLGFKGVPHT-----YDNKREGW-RNVKVRLDRVVAD 932 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTS----QNMKP 280 + + +A++ + SDH P++++L + +P + +Q +P Sbjct: 933 DKWRDIYSTAQVVHLV---SPCSDHCPILLNLVVKDPHQLRQKCLHYEIVWEREP 984 >gi|238880020|gb|EEQ43658.1| conserved hypothetical protein [Candida albicans WO-1] Length = 438 Score = 39.4 bits (90), Expect = 0.60, Method: Composition-based stats. Identities = 39/303 (12%), Positives = 86/303 (28%), Gaps = 40/303 (13%) Query: 4 VTVATWNVNSIR-------ARIHNLAAWIK-----ENNPDIICLQETKTEDKNFPFETLQ 51 + + T+N ++ R+ +A + + + DI+ LQE E+ + + Sbjct: 20 IKLLTFNTWGLKFISKHRKERLRAIADALANPKSPDEDYDIVALQEIWCEEDWQYLDLVC 79 Query: 52 SLNY---HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108 Y + G S G+A+LSK E + + A F + + + + Sbjct: 80 RPRYPYRRVFKAGIVSGPGLAVLSKISIAETFLYRFPINGRPSAFFRGDFYVGKSIAVTM 139 Query: 109 GN--------------LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDY 154 ++ + F + + +I GD Sbjct: 140 FQPHHPDILPIALLNSHMHAPYGSGDASYSTHRACQAWDFAKLVRMLKKAGYAVIQVGDL 199 Query: 155 NIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADS 214 N P + + + + T ++ + + Sbjct: 200 NSKPDSLPYKLFTVEGGLTDSWNVLNKDNVVPNDQIATLSLEDQISLAGV-TCNSRLNTW 258 Query: 215 WSKNKGI---RIDHIMLSPEATSLLHSARIDTKPRGWTKP-----SDHTPVIVSLDIPEP 266 R+D+ ++ + + SA++ P SDH V L I Sbjct: 259 RESRPFWEACRLDYALIDASNITPV-SAQV-RFVDKLPPPLSCSYSDHFAYSVDLVIRPK 316 Query: 267 RKK 269 ++ Sbjct: 317 EER 319 >gi|145351477|ref|XP_001420103.1| predicted protein [Ostreococcus lucimarinus CCE9901] gi|144580336|gb|ABO98396.1| predicted protein [Ostreococcus lucimarinus CCE9901] Length = 578 Score = 39.4 bits (90), Expect = 0.60, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 20/44 (45%), Gaps = 1/44 (2%) Query: 17 RIHNLAAWIKENNPDIICLQETKTED-KNFPFETLQSLNYHIET 59 R N+ I N DI+CLQE +++ ++F + Y Sbjct: 248 RRQNILKEIVNYNADILCLQEVQSDHYEDFFQGEMAKYGYASVY 291 >gi|110677885|ref|YP_680892.1| hypothetical protein RD1_0499 [Roseobacter denitrificans OCh 114] gi|109454001|gb|ABG30206.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114] Length = 253 Score = 39.4 bits (90), Expect = 0.60, Method: Composition-based stats. Identities = 32/265 (12%), Positives = 72/265 (27%), Gaps = 25/265 (9%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 + V +WNV + +A + NPDI LQE + + +++ H+ Sbjct: 9 LRVLSWNVFNENPDPARIAEALATLNPDIALLQE--ALPAHI--DEIKASFPHVSVARDY 64 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 + G ++ + + + + + Sbjct: 65 ALKGELCHLVIASRFPTRRETTLFHADTSKPAPTRWARHAGWVEFLDSLSVDVVVPGTRP 124 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ--PHDCYNPIIWENDACFTLEVRQ 181 + + + ++ EL E + Y L R Sbjct: 125 FRVVNLHTSAGVSPSVRQAELAETQRHFDHEGPCLVAGDFNSYAVPWLAPLLAIPLHYRP 184 Query: 182 SFQKLQNMGFTDAIRATH---DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 + +A H +F + D + + + + + Sbjct: 185 KDWLIFERRALNAWFRRRGFAPALHGVTFPKFRLQM---------DQVF-TRDIM--VET 232 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263 A I+ R W SDH P+++ + + Sbjct: 233 AAIER--RLW--GSDHRPILLDISV 253 >gi|90579026|ref|ZP_01234836.1| hypothetical protein VAS14_04953 [Vibrio angustum S14] gi|90439859|gb|EAS65040.1| hypothetical protein VAS14_04953 [Vibrio angustum S14] Length = 379 Score = 39.4 bits (90), Expect = 0.60, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 26/70 (37%), Gaps = 17/70 (24%) Query: 211 YADSWSKNKGIRIDHIMLSPEATSLLHSARI-----DTKPR-------GWTKP---SDHT 255 + W+ G+R+D+++ S + + R G KP SDH Sbjct: 312 RKNEWTHLAGLRLDYVLPSKNLD--VIETGVFWPDKHDSLRELILDCKGREKPSAGSDHR 369 Query: 256 PVIVSLDIPE 265 V ++I + Sbjct: 370 MVWADINIAD 379 >gi|72008481|ref|XP_786487.1| PREDICTED: similar to RP1-30M3.3 [Strongylocentrotus purpuratus] gi|115968135|ref|XP_001192231.1| PREDICTED: similar to RP1-30M3.3 [Strongylocentrotus purpuratus] Length = 238 Score = 39.4 bits (90), Expect = 0.60, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 18/40 (45%), Gaps = 5/40 (12%) Query: 4 VTVATWNVNSIR-----ARIHNLAAWIKENNPDIICLQET 38 + + TWN+ + AR ++ PD+I LQE Sbjct: 36 LRLVTWNIYGLGNKDTLARTSAACDTLESLFPDVIFLQEV 75 >gi|116200556|ref|XP_001226090.1| hypothetical protein CHGG_10823 [Chaetomium globosum CBS 148.51] gi|88175537|gb|EAQ83005.1| hypothetical protein CHGG_10823 [Chaetomium globosum CBS 148.51] Length = 484 Score = 39.4 bits (90), Expect = 0.60, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 22/59 (37%), Gaps = 7/59 (11%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 IDH + + + RG SDH P ++ + I P +Q N K + Sbjct: 138 IDHFWATVGL----QTTYYGLEQRGK---SDHYPQVLEVHISGPPLQQSQPEGWNWKMM 189 >gi|15838039|ref|NP_298727.1| hypothetical protein XF1438 [Xylella fastidiosa 9a5c] gi|9106456|gb|AAF84247.1|AE003974_2 conserved hypothetical protein [Xylella fastidiosa 9a5c] Length = 245 Score = 39.4 bits (90), Expect = 0.61, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 18/49 (36%), Gaps = 11/49 (22%) Query: 221 IR----IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 R IDHI++S I SDH V + L IP+ Sbjct: 200 WRPERAIDHILVSEGL-------HICKTEAVPAAFSDHLAVSMDLVIPQ 241 >gi|169787274|gb|ACA80076.1| putative DNA lyase [Colletotrichum jacksonii] Length = 233 Score = 39.4 bits (90), Expect = 0.61, Method: Composition-based stats. Identities = 11/57 (19%), Positives = 24/57 (42%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81 + DI+ +QETK + K+ + + + + K+ G + ++ Y I Sbjct: 2 FEILEADIVVMQETKIQRKDLSDDMVLVPGWDVAFSLPKNKKGYSGVAIYTRIATCC 58 >gi|169787272|gb|ACA80075.1| putative DNA lyase [Colletotrichum jacksonii] gi|169787318|gb|ACA80098.1| putative DNA lyase [Colletotrichum jacksonii] gi|169787322|gb|ACA80100.1| putative DNA lyase [Colletotrichum jacksonii] gi|169787324|gb|ACA80101.1| putative DNA lyase [Colletotrichum jacksonii] Length = 233 Score = 39.4 bits (90), Expect = 0.61, Method: Composition-based stats. Identities = 11/57 (19%), Positives = 24/57 (42%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81 + DI+ +QETK + K+ + + + + K+ G + ++ Y I Sbjct: 2 FEILEADIVVMQETKIQRKDLSDDMVLVPGWDVAFSLPKNKKGYSGVAIYTRIATCC 58 >gi|6735373|emb|CAB68194.1| putative protein [Arabidopsis thaliana] Length = 597 Score = 39.4 bits (90), Expect = 0.61, Method: Composition-based stats. Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 2/40 (5%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56 R NL I + DI+CLQE ++ +F L L+ H Sbjct: 279 RRQNLLREIVKYRADIVCLQEV--QNDHFEEFFLPELDKH 316 >gi|22331849|ref|NP_191415.2| endonuclease/exonuclease/phosphatase family protein [Arabidopsis thaliana] gi|75248588|sp|Q8W0Z9|CCR4A_ARATH RecName: Full=Carbon catabolite repressor protein 4 homolog 1; Short=CCR4 homolog 1 gi|18087604|gb|AAL58932.1|AF462845_1 AT3g58560/F14P22_150 [Arabidopsis thaliana] gi|22137046|gb|AAM91368.1| At3g58560/F14P22_150 [Arabidopsis thaliana] Length = 602 Score = 39.4 bits (90), Expect = 0.61, Method: Composition-based stats. Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 2/40 (5%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56 R NL I + DI+CLQE ++ +F L L+ H Sbjct: 279 RRQNLLREIVKYRADIVCLQEV--QNDHFEEFFLPELDKH 316 >gi|68061719|ref|XP_672860.1| hypothetical protein [Plasmodium berghei strain ANKA] gi|56490274|emb|CAI05680.1| hypothetical protein PB405489.00.0 [Plasmodium berghei] Length = 298 Score = 39.4 bits (90), Expect = 0.61, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 25/69 (36%), Gaps = 10/69 (14%) Query: 186 LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKP 245 ++ M D + + Y+F+ ++SK IDHI+ + + I Sbjct: 61 MKEMDLPDIYKTFYPETKGYTFFSARHSTFSK-----IDHIIGHKAGLNRYKNIEIVPCI 115 Query: 246 RGWTKPSDH 254 SDH Sbjct: 116 L-----SDH 119 >gi|295133317|ref|YP_003583993.1| endonuclease/Exonuclease/phosphatase family protein [Zunongwangia profunda SM-A87] gi|294981332|gb|ADF51797.1| endonuclease/Exonuclease/phosphatase family protein [Zunongwangia profunda SM-A87] Length = 349 Score = 39.4 bits (90), Expect = 0.62, Method: Composition-based stats. Identities = 31/248 (12%), Positives = 72/248 (29%), Gaps = 25/248 (10%) Query: 19 HNLAAWIKENNPDIICLQET-KTE--DKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75 + IKE +PDI+ ++E K E +K +P++ ++ + + + Sbjct: 122 EKINDIIKEADPDILTIEEYYKNEYLEKKYPYKFIKYRSDKSSFGQAIFSKFPLLAKRSL 181 Query: 76 PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135 + ++ + I TI + +L + + + S Sbjct: 182 DFHVDNFTGDNNNAIFTDIIIKKDTIRLYNIHFQSLQVTEDVQEVDNFKNKQESKKVIKN 241 Query: 136 RFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAI 195 + + + + P + +VR + + Sbjct: 242 ISSGFVRQQNQSERVKRSIDSSEYPVIISGDFNNTAFSYTYNQVRNDRFQDAFVKKGAGF 301 Query: 196 RATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHT 255 + Y + + +RID +L I++ R SDH Sbjct: 302 SS-----------TYNLNYFP----LRIDFHLLDTVF-------EINSYERIKVPYSDHY 339 Query: 256 PVIVSLDI 263 P++ + I Sbjct: 340 PILTTFSI 347 >gi|170782964|ref|YP_001711298.1| hypothetical protein CMS_2654 [Clavibacter michiganensis subsp. sepedonicus] gi|169157534|emb|CAQ02728.1| conserved hypothetical protein [Clavibacter michiganensis subsp. sepedonicus] Length = 281 Score = 39.4 bits (90), Expect = 0.62, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 23/49 (46%), Gaps = 5/49 (10%) Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDH 254 ++ +Y A + RID ++++P+ + I+T PSDH Sbjct: 229 TWSNYKAPKRTT---RRIDWMLVTPDVE--VERVGINTTRIDGRAPSDH 272 >gi|224011357|ref|XP_002295453.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|209583484|gb|ACI64170.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 712 Score = 39.4 bits (90), Expect = 0.62, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 25/80 (31%), Gaps = 1/80 (1%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFE-TLQSLNYHIETCGQKSYNGVAILSKYQ 75 R+ + + +N DIICLQE + + L L Y + L Sbjct: 199 RLERMIQILSHSNSDIICLQECELQSFQDDLAPALSKLGYDGIAQEDERDERPTSLKYVT 258 Query: 76 PIEIVTHLPGDDLDVQARFI 95 + +++F Sbjct: 259 KHRDPRNHIAATFWKRSKFD 278 >gi|149202233|ref|ZP_01879206.1| endonuclease/exonuclease/phosphatase family protein [Roseovarius sp. TM1035] gi|149144331|gb|EDM32362.1| endonuclease/exonuclease/phosphatase family protein [Roseovarius sp. TM1035] Length = 341 Score = 39.4 bits (90), Expect = 0.62, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 22/53 (41%), Gaps = 12/53 (22%) Query: 223 IDHIMLSPEATSL---------LHS--ARIDTKPRG-WTKPSDHTPVIVSLDI 263 +D+I++SP+ + + + R SDH PV + L++ Sbjct: 289 LDYILISPDLMARRPVWRIWHPFDDPVCWDNKELRDALLMASDHFPVSLDLEL 341 >gi|150396093|ref|YP_001326560.1| endonuclease/exonuclease/phosphatase [Sinorhizobium medicae WSM419] gi|150027608|gb|ABR59725.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium medicae WSM419] Length = 287 Score = 39.4 bits (90), Expect = 0.62, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 3/56 (5%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278 +D ++ +P L+ S + P SDH PV S+D+ +K D + Sbjct: 227 LDRVLGNPH--HLVTSVEVHDSPLARV-ASDHLPVKASIDLKAAQKDDADGDEARL 279 >gi|222615657|gb|EEE51789.1| hypothetical protein OsJ_33245 [Oryza sativa Japonica Group] Length = 825 Score = 39.4 bits (90), Expect = 0.63, Method: Composition-based stats. Identities = 21/168 (12%), Positives = 43/168 (25%), Gaps = 15/168 (8%) Query: 101 INTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP 160 + + + + DD W + + + + N Sbjct: 19 FWKKEINLRLRTVSRLFMDVDVMEDDGFWWRFTGVYGEPRSDKKDLTWKALRTLNATKGE 78 Query: 161 HDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT-----HDTHHLYSF---WDYYA 212 E + E + + F + T +++ W Sbjct: 79 LWLCVGDFNEVLFSWEKERGHAKAQSCMDRFRQTLDCCSLSNLGFTGDPFTWRNNWCVRD 138 Query: 213 DSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 + R+D + + S R+ G + SDH PVIV+ Sbjct: 139 GYIRE----RLDRAVADSDWCCRFPSFRVRK---GDPRHSDHHPVIVT 179 >gi|156376821|ref|XP_001630557.1| predicted protein [Nematostella vectensis] gi|156217580|gb|EDO38494.1| predicted protein [Nematostella vectensis] Length = 222 Score = 39.4 bits (90), Expect = 0.63, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 1/53 (1%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 +A N+NSI+ + L IK+ ++ + ETK D ++P Y + Sbjct: 89 IAHLNINSIQNKFEELCKIIKDLQIHVMFISETKI-DSSYPDSQFSMAGYSLY 140 >gi|156376358|ref|XP_001630328.1| predicted protein [Nematostella vectensis] gi|156217346|gb|EDO38265.1| predicted protein [Nematostella vectensis] Length = 494 Score = 39.4 bits (90), Expect = 0.63, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 1/53 (1%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 +A N+NSI+ + L IK+ ++ + ETK D ++P Y + Sbjct: 237 IAHLNINSIQNKFEELCKIIKDLQIHVMFISETKI-DSSYPDSQFSMAGYSLY 288 >gi|156349335|ref|XP_001622016.1| hypothetical protein NEMVEDRAFT_v1g221280 [Nematostella vectensis] gi|156208405|gb|EDO29916.1| predicted protein [Nematostella vectensis] Length = 1047 Score = 39.4 bits (90), Expect = 0.63, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 1/53 (1%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 +A N+NSI+ + L IK+ ++ + ETK D ++P Y + Sbjct: 321 IAHLNINSIQNKFEELCKIIKDLQIHVMFISETKI-DSSYPDSQFSMAGYSLY 372 Score = 39.4 bits (90), Expect = 0.63, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 1/53 (1%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 +A N+NSI+ + L IK+ ++ + ETK D ++P Y + Sbjct: 475 IAHLNINSIQNKFEELCKIIKDLQIHVMFISETKI-DSSYPDSQFSMAGYSLY 526 Score = 39.4 bits (90), Expect = 0.63, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 1/53 (1%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 +A N+NSI+ + L IK+ ++ + ETK D ++P Y + Sbjct: 782 IAHLNINSIQNKFEELCKIIKDLQIHVMFISETKI-DSSYPDSQFSMAGYSLY 833 >gi|297846518|ref|XP_002891140.1| endonuclease/exonuclease/phosphatase family protein [Arabidopsis lyrata subsp. lyrata] gi|297336982|gb|EFH67399.1| endonuclease/exonuclease/phosphatase family protein [Arabidopsis lyrata subsp. lyrata] Length = 419 Score = 39.4 bits (90), Expect = 0.63, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 24/61 (39%), Gaps = 1/61 (1%) Query: 15 RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKY 74 +AR H + + +K D CLQE E +F ++SL Y + + + Sbjct: 123 KARSHAILSVLKNLKADFFCLQEVD-EYDSFYRNNMESLGYSGIYIQRTGQRKRDGCAIF 181 Query: 75 Q 75 Sbjct: 182 Y 182 Score = 38.2 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 19/52 (36%), Gaps = 13/52 (25%) Query: 223 IDHIMLSPEATSLLHSARID-------TKPRGWT----KPSDHTPVIVSLDI 263 +D+I +SP + I G+ PSDH P+ +I Sbjct: 367 LDYIFISPS--DFIKPVSILQLPEPDSPDIVGFLPNHHHPSDHLPIGAEFEI 416 >gi|294506961|ref|YP_003571019.1| Endonuclease/exonuclease/phosphatase family [Salinibacter ruber M8] gi|294343289|emb|CBH24067.1| Endonuclease/exonuclease/phosphatase family [Salinibacter ruber M8] Length = 361 Score = 39.4 bits (90), Expect = 0.63, Method: Composition-based stats. Identities = 42/314 (13%), Positives = 83/314 (26%), Gaps = 78/314 (24%) Query: 3 VVTVATWNVNSIRARIHNLAA-----WIKE-----------------------NNPDIIC 34 V VATWN + + +I + D++ Sbjct: 66 TVRVATWN-------LEHFVDGHDNPYIDAGTENTPAPDLKNRKRRVARALRRLDADLLV 118 Query: 35 LQETKTEDKN----FPFETLQSLNYHIE-TCGQKSYNGVAILSKYQPIEIVTHLPG---- 85 LQE E + F + L Y + ++ +L P+ +V + Sbjct: 119 LQE--AESEAFLQSFVEDRLGDTGYRFATSVESPTWYMNVVLLSRYPLGVVRNYADVVTP 176 Query: 86 -------------DDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIK 132 L + + + +L G + Sbjct: 177 IVGQEADNGEPAAQSLTNHRLWTADVRVAPNRVWTLIGAHLKAGRSAADRGWRIGQIRFL 236 Query: 133 RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192 + ++ AGD N +P + + + + Q + ++ FT Sbjct: 237 HAELSRLRDDRPAAKMLVAGDLNSLPDSPELRLLLNNPD--RPAPDSVQPGRVPGDIRFT 294 Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR-----G 247 D + H + N ++D+++ +P + L + R Sbjct: 295 DPLSDRPTPTHP-----------ADNPVRQLDYLLPNPALSDRLVDGSV-RVARPLPADS 342 Query: 248 WTKPSDHTPVIVSL 261 SDH PV S Sbjct: 343 MAATSDHLPVAASF 356 >gi|170739969|ref|YP_001768624.1| endonuclease/exonuclease/phosphatase [Methylobacterium sp. 4-46] gi|168194243|gb|ACA16190.1| Endonuclease/exonuclease/phosphatase [Methylobacterium sp. 4-46] Length = 1795 Score = 39.4 bits (90), Expect = 0.63, Method: Composition-based stats. Identities = 9/42 (21%), Positives = 21/42 (50%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 +DH++++ + + + + + SDH P++ L IP Sbjct: 1285 LDHVLVTDALAAGVQFEPVHINADFFDQTSDHDPLLARLAIP 1326 >gi|300776178|ref|ZP_07086037.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910] gi|300505311|gb|EFK36450.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910] Length = 311 Score = 39.4 bits (90), Expect = 0.64, Method: Composition-based stats. Identities = 37/269 (13%), Positives = 67/269 (24%), Gaps = 33/269 (12%) Query: 20 NLAAWIKENN---PDIICLQET---KTEDKNFPFETLQ-SLNYHIETCGQKSYNGVAILS 72 ++ +KE+N P +I L E K + E + VA+L Sbjct: 47 HVFQLMKEDNGVLPFMIGLSEVSGRKVLEDLVEMEPFNSEYGIVHYNSMDERKVDVAMLY 106 Query: 73 KYQPIEIVTHLPGDDLD-----------VQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 +E++ + + + + + +LP Sbjct: 107 DKNKVEVIDSETITFFFEIVNKNTENYDTTRDVLFSKIKYKGEIINVFIAHLPSKREKDI 166 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD--CYNPIIWENDACFTLEV 179 K + R +E +I GD+N P + Sbjct: 167 NKPKRAFILNEIRQRIMKIVDADKEHVILCGDFNENPDDENLVQILYDNEHEKVLVNPFQ 226 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRID-HIMLSPEATSLLHS 238 + + + + S D ++ D HI S + S + Sbjct: 227 QLFSTRNYSTFHYKSGLLYDQIIMSRSLLDNKTLAFQ-------DAHIFNSEKIRSRTRN 279 Query: 239 AR-----IDTKPRGWTKPSDHTPVIVSLD 262 R SDH PV V Sbjct: 280 FEGRPFRTYAGTRYLGGYSDHFPVFVKFK 308 >gi|326920839|ref|XP_003206674.1| PREDICTED: protein angel homolog 1-like [Meleagris gallopavo] Length = 659 Score = 39.4 bits (90), Expect = 0.64, Method: Composition-based stats. Identities = 11/64 (17%), Positives = 24/64 (37%), Gaps = 7/64 (10%) Query: 17 RIHNLAAWIKENNPDIICLQETKTED----KNFPFETLQSLNYHIETCGQKSYNGVAILS 72 R+ N+ I+ +PD++CLQE ++ + T + + + Sbjct: 264 RLPNILQEIQHWDPDVLCLQEV--QENHYREQLEP-TFMKMGFACFYKRRTGRKTDGCAV 320 Query: 73 KYQP 76 Y+ Sbjct: 321 CYKQ 324 >gi|169787258|gb|ACA80068.1| putative DNA lyase [Colletotrichum paspali] gi|169787304|gb|ACA80091.1| putative DNA lyase [Colletotrichum paspali] Length = 233 Score = 39.4 bits (90), Expect = 0.64, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 22/57 (38%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81 + DI+ +QETK + K+ + + + + K G + ++ Y Sbjct: 2 FEILEADIVIMQETKIQRKDLHDDMVLIPGWDVFFSLPKHKKGYSGVAIYTRNATCC 58 >gi|160890835|ref|ZP_02071838.1| hypothetical protein BACUNI_03280 [Bacteroides uniformis ATCC 8492] gi|317479733|ref|ZP_07938855.1| endonuclease/Exonuclease/phosphatase [Bacteroides sp. 4_1_36] gi|156859834|gb|EDO53265.1| hypothetical protein BACUNI_03280 [Bacteroides uniformis ATCC 8492] gi|316904103|gb|EFV25935.1| endonuclease/Exonuclease/phosphatase [Bacteroides sp. 4_1_36] Length = 287 Score = 39.4 bits (90), Expect = 0.64, Method: Composition-based stats. Identities = 7/40 (17%), Positives = 18/40 (45%), Gaps = 2/40 (5%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 ID++ + + + + SDH P++V+++ Sbjct: 250 IDYVFVRNGL--KVLRYGVLAETENNAFLSDHAPILVTVE 287 >gi|83774376|dbj|BAE64500.1| unnamed protein product [Aspergillus oryzae] Length = 1292 Score = 39.4 bits (90), Expect = 0.64, Method: Composition-based stats. Identities = 31/280 (11%), Positives = 67/280 (23%), Gaps = 32/280 (11%) Query: 1 MSV--VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 M+ + + N+ RA + L + N DI+ +QE L + + H+ Sbjct: 1 MTTPNLRLVQLNIWKSRAGMEALINDSQTQNLDILLIQE----------PPLTAYSTHVN 50 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 S Q + N + ++ Sbjct: 51 H-----SAWHLYQSTCQEDTPKKRSLLYVNRRISTASHRQIKCNHPDVTAVKMWTMERQM 105 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + + Y + + + Q + E +P + + Sbjct: 106 LIFSIYVPTTNHSQPMEEVSIQAMLEEIETCIQQAIETTDKPTTIIMAGDFNRHHPMWSK 165 Query: 179 VRQSFQKLQNMGFTDAIRATHD-----THHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 R +++ H ++W + ID + Sbjct: 166 NRIYHVAIEHAEELVTFFHKHGLQPCLPRGTPTYWSMSYPGSNST----IDLTVTDTP-- 219 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDS 273 L + G SDH V + R +++ Sbjct: 220 ESLIKCHLYHDHYG----SDHRAVYSEWSLDPSRNAEREP 255 >gi|313201147|ref|YP_004039805.1| endonuclease/exonuclease/phosphatase [Methylovorus sp. MP688] gi|312440463|gb|ADQ84569.1| Endonuclease/exonuclease/phosphatase [Methylovorus sp. MP688] Length = 241 Score = 39.4 bits (90), Expect = 0.65, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 25/53 (47%), Gaps = 5/53 (9%) Query: 221 IRIDHIMLSPEATSLLHSARID-TKPRGWTKPSDHTPVIVSLDIPEPRKKQQD 272 +R+D + + + RI R + SDH P+++ L+ PE +++ Sbjct: 193 LRLDRVWY-EAEGIKITAHRIHGNDIR---RLSDHLPIVIELEWPESWPEKRT 241 >gi|115730339|ref|XP_791769.2| PREDICTED: similar to reverse transcriptase-like protein, partial [Strongylocentrotus purpuratus] Length = 956 Score = 39.4 bits (90), Expect = 0.65, Method: Composition-based stats. Identities = 15/36 (41%), Positives = 23/36 (63%) Query: 9 WNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKN 44 WN NS+R + + L +I ENN DI+ L ET + ++ Sbjct: 76 WNCNSLRNKTYLLTDYILENNVDIMFLTETWLKSED 111 >gi|294668724|ref|ZP_06733817.1| endonuclease/exonuclease/phosphatase family protein [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291309241|gb|EFE50484.1| endonuclease/exonuclease/phosphatase family protein [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 250 Score = 39.4 bits (90), Expect = 0.66, Method: Composition-based stats. Identities = 32/263 (12%), Positives = 73/263 (27%), Gaps = 27/263 (10%) Query: 4 VTVATWNVN-SI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57 +T+AT+N++ + + +I ++A ++ PDI+ LQE + +N E Sbjct: 5 ITIATYNIHKGMSPLNRKVQISDMAQALESLKPDILFLQEV--QGQNLLRELKLP----- 57 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 + + + + + Q + I L Sbjct: 58 -DFPARPQDNIIADHLAYYTSYGKNAVFPQKHHGNAILSRLPMQMRQNVNISVNRLEKRG 116 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + D L LE + + + + P+I D Sbjct: 117 VLHCEILPDGWEMPIVCLCAHLNLLERDRVKQYVAIFEYVTTYIPPEAPLILAGDFNDWR 176 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 + + + + + +D I + + Sbjct: 177 HKSTLNIGSTLGLTEVFLDRHGELPKTF-------PARMPV--LSLDRIY-TRNLD--IL 224 Query: 238 SARIDTKPRGWTKPSDHTPVIVS 260 +A + ++ W SDH P+ + Sbjct: 225 NATLHSEE-PWQYLSDHLPLSAT 246 >gi|147768602|emb|CAN78335.1| hypothetical protein VITISV_004143 [Vitis vinifera] Length = 336 Score = 39.4 bits (90), Expect = 0.66, Method: Composition-based stats. Identities = 24/148 (16%), Positives = 48/148 (32%), Gaps = 17/148 (11%) Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + + + F ++ E +++ I ++ + + N F E Sbjct: 148 CRFKNCEDGFCWSFSGVYGPTMKAERKELWSELGAIRGIWNEPWCIVGDFNMIRFPSERS 207 Query: 181 QSFQKLQNMGFTDAIRATHD------THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 + + Q M + D +++ + RID ++S E S Sbjct: 208 RGGRLSQEMRRFSEVVEELDLRDLPLQGGSFTWC----GGLNNRSKSRIDRFLISEEWES 263 Query: 235 LLHSAR--IDTKPRGWTKPSDHTPVIVS 260 A I T+P SDH PV++ Sbjct: 264 HFQGAVQTILTRP-----VSDHAPVLLD 286 >gi|325922786|ref|ZP_08184516.1| metal-dependent hydrolase [Xanthomonas gardneri ATCC 19865] gi|325546728|gb|EGD17852.1| metal-dependent hydrolase [Xanthomonas gardneri ATCC 19865] Length = 305 Score = 39.0 bits (89), Expect = 0.67, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 7/63 (11%) Query: 4 VTVATWNVNSIR----ARIHNLAAWIKENNPDIICLQET---KTEDKNFPFETLQSLNYH 56 +T+ T N++ R AR +A +K+ PD+I LQE + +N + L Y Sbjct: 53 MTLVTLNLHHDREDWPARRAYIAKQLKQLAPDVIALQEVIERRGSVENQAAWLARKLGYE 112 Query: 57 IET 59 Sbjct: 113 YTF 115 >gi|221105136|ref|XP_002165882.1| PREDICTED: similar to pol-like protein, partial [Hydra magnipapillata] Length = 606 Score = 39.0 bits (89), Expect = 0.67, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 20/49 (40%), Gaps = 2/49 (4%) Query: 5 TVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQ 51 + + N+ + + + +E N DII LQET N L+ Sbjct: 5 KIFSVNICGLNDKNKQNVVITKFQEMNYDIIMLQETHLSKNNADDFLLK 53 >gi|221091677|ref|XP_002169998.1| PREDICTED: similar to pol-like protein [Hydra magnipapillata] Length = 308 Score = 39.0 bits (89), Expect = 0.67, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 8/43 (18%) Query: 7 ATWNVNSI-----RARIHNLAAWIKENNPDIICLQETKTEDKN 44 T NVN + R HN+ ++K DI C+QET ++ Sbjct: 2 LTLNVNGLYDDIKR---HNIMMYLKNTCCDIACIQETHFSNEK 41 >gi|297612697|ref|NP_001066197.2| Os12g0156200 [Oryza sativa Japonica Group] gi|108862221|gb|ABA96496.2| retrotransposon protein, putative, unclassified, expressed [Oryza sativa Japonica Group] gi|255670064|dbj|BAF29216.2| Os12g0156200 [Oryza sativa Japonica Group] Length = 1764 Score = 39.0 bits (89), Expect = 0.67, Method: Composition-based stats. Identities = 22/175 (12%), Positives = 56/175 (32%), Gaps = 14/175 (8%) Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 + L P + ++ R S + + I + + Sbjct: 217 YVQLSPEEPQWHVTFVYGEPRVENRHRMWSLLRTIHQSSSLPWAV-IGDFNETMWQFEHF 275 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 +++ LQ+ D +D + W +N +R+D ++ Sbjct: 276 SRTPRGEPQMQDFRDVLQDCELHDLGFKGVPHT-----YDNKREGW-RNVKVRLDRVVAD 329 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTS----QNMKP 280 + + +A++ + SDH P++++L + +P + +Q +P Sbjct: 330 DKWRDIYSTAQVVHLV---SPCSDHCPILLNLVVKDPHQLRQKCLHYEIVWEREP 381 >gi|87308507|ref|ZP_01090647.1| deoxyribonuclease gamma (precursor) [Blastopirellula marina DSM 3645] gi|87288599|gb|EAQ80493.1| deoxyribonuclease gamma (precursor) [Blastopirellula marina DSM 3645] Length = 392 Score = 39.0 bits (89), Expect = 0.67, Method: Composition-based stats. Identities = 13/85 (15%), Positives = 34/85 (40%), Gaps = 10/85 (11%) Query: 3 VVTVATWNV----NSIRARIHNLAAWIKE--NNPDIICLQETKTEDKNFPFET---LQSL 53 + +A++N+ S +A ++ A + + D++ +QE ++ D++ E + + Sbjct: 125 TIRIASFNIQVFGRS-KADKPHVMARLAQIVRQYDVMAIQEIRSLDQSILPEFIDQINAA 183 Query: 54 NYHIETCGQKSYNGVAILSKYQPIE 78 H + +Y I Sbjct: 184 GRHYDYVIGPRLGRSDSKEQYAYIY 208 >gi|189025772|ref|YP_001933544.1| hypothetical protein TPASS_0544 [Treponema pallidum subsp. pallidum SS14] gi|189018347|gb|ACD70965.1| hypothetical protein TPASS_0544 [Treponema pallidum subsp. pallidum SS14] Length = 624 Score = 39.0 bits (89), Expect = 0.68, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 15/52 (28%) Query: 4 VTVATWNV---------NSIRARI--HNLAAWIKENNPDIICLQETKTEDKN 44 + +A++NV +S RAR+ + +K PD+ICL E +D + Sbjct: 301 LNIASYNVENFSAGNKADSARARVFAKHFVNDLKA--PDVICLVEI--QDDD 348 >gi|147863118|emb|CAN78774.1| hypothetical protein VITISV_001219 [Vitis vinifera] Length = 1012 Score = 39.0 bits (89), Expect = 0.68, Method: Composition-based stats. Identities = 11/28 (39%), Positives = 17/28 (60%) Query: 15 RARIHNLAAWIKENNPDIICLQETKTED 42 R + + A IK D++CLQETK ++ Sbjct: 207 REKRKVIKALIKGQKVDLVCLQETKMQE 234 >gi|125842765|ref|XP_698034.2| PREDICTED: protein angel homolog 1-like [Danio rerio] Length = 667 Score = 39.0 bits (89), Expect = 0.68, Method: Composition-based stats. Identities = 15/109 (13%), Positives = 31/109 (28%), Gaps = 5/109 (4%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73 R+ + ++ PDI+CLQE ++ +F + L ++ Y + Sbjct: 293 RLQAVLKELQIWQPDIVCLQEV--QEDHFQEQMHPVLINMGYTCIYKRRTGSKTDGCAVL 350 Query: 74 YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 Y+ ++ L + PH Sbjct: 351 YRGERFTQLSVSLLEFRRSECELLDRDNVGIVLLLQPTAGPHHQFTPVC 399 >gi|15639533|ref|NP_218983.1| hypothetical protein TP0544 [Treponema pallidum subsp. pallidum str. Nichols] gi|3322837|gb|AAC65531.1| predicted coding region TP0544 [Treponema pallidum subsp. pallidum str. Nichols] gi|291059921|gb|ADD72656.1| endonuclease/exonuclease/phosphatase family [Treponema pallidum subsp. pallidum str. Chicago] Length = 622 Score = 39.0 bits (89), Expect = 0.68, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 15/52 (28%) Query: 4 VTVATWNV---------NSIRARI--HNLAAWIKENNPDIICLQETKTEDKN 44 + +A++NV +S RAR+ + +K PD+ICL E +D + Sbjct: 301 LNIASYNVENFSAGNKADSARARVFAKHFVNDLKA--PDVICLVEI--QDDD 348 >gi|261334720|emb|CBH17714.1| pantothenate kinase subunit, putative [Trypanosoma brucei gambiense DAL972] Length = 1467 Score = 39.0 bits (89), Expect = 0.69, Method: Composition-based stats. Identities = 41/326 (12%), Positives = 75/326 (23%), Gaps = 56/326 (17%) Query: 4 VTVATWNVNSI--------RARIHNLAAWIKENNPDIICLQET----------------- 38 + V ++N N + R RI + + + D+I LQE Sbjct: 35 LRVLSYNFNILPRGCGGFQRERISSFLETVDQY--DVIMLQEVYAASVLPYFLQNRMCFQ 92 Query: 39 KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT 98 K Q + I + A Sbjct: 93 KMLVDELVLRGFQHYAISKQPSYTTMLRNNVFSDNGLIIASRFPIGQRGSYTFRSHERAV 152 Query: 99 FTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP 158 ++ L S + + + S+ ++ + N+ Sbjct: 153 QSVRRGCLFAEVKVPLTSGGEESIIFFNVHLRQEDSDDVTSEHVKETRQFAASVIRNMCS 212 Query: 159 QPHDCYNPI--------------IWENDACFTLEVR----QSFQKLQNMGFTDAIRATHD 200 P D E Q+ DA Sbjct: 213 NPEDVAQIPFVLAGDFDVNGINLHNVGQPTKKYEDLLGELQALGSGVREAVFDAQHRHPP 272 Query: 201 THHLYSFWDYYAD-SWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP----SDHT 255 T F+ + + R D+ +S + + I +P SDH Sbjct: 273 TRPTELFFPTQSKLVRNSFSPQRQDYFFVSHTVA--VKNPDIHKFVSDSQQPYTYLSDHF 330 Query: 256 PVIVSLDIPEPRKKQQDSTSQNMKPI 281 V L IP+ K++ + P+ Sbjct: 331 GVSAVLAIPQTSKQRH----KRWMPL 352 >gi|222632149|gb|EEE64281.1| hypothetical protein OsJ_19117 [Oryza sativa Japonica Group] Length = 911 Score = 39.0 bits (89), Expect = 0.69, Method: Composition-based stats. Identities = 39/252 (15%), Positives = 81/252 (32%), Gaps = 36/252 (14%) Query: 12 NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAIL 71 NS AR L IK + DI+ LQETK +NF L S + ++ Sbjct: 457 NS--ARRGLLKEMIKLRDIDIVGLQETK--RENFSNRELNS--FQGSKTFSWAWKASRGA 510 Query: 72 SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWI 131 S + + T + + + + K++ K I Sbjct: 511 SGGILLGVNTDKVELIRNHVGAYFL--------------------SCVIRHKFNQKTWEI 550 Query: 132 KRFLRFASQRLELEEPLIFAGDYNIIPQPH---DCYNPIIWENDACFTLEVRQSFQKLQN 188 + L+ + P P +NP + + + ++ + Sbjct: 551 VVVYGPVTDSLKQSFLSELSWHLQDSPHPFIIGGDFNPYRFAKEKSNSNLDFRAMDLFNS 610 Query: 189 MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGW 248 + H + ++F D ++ +D +++S ++ + + + R Sbjct: 611 FILDMDLSELHRSGARFTF-TNKQDCPTQEV---LDRVLVSQLWEAIYPISTLLSITR-- 664 Query: 249 TKPSDHTPVIVS 260 SDH+P+I+ Sbjct: 665 -IGSDHSPLILD 675 >gi|328789948|ref|XP_392265.4| PREDICTED: phosphatidylinositol 4,5-bisphosphate 5-phosphatase A-like isoform 1 [Apis mellifera] Length = 430 Score = 39.0 bits (89), Expect = 0.69, Method: Composition-based stats. Identities = 47/325 (14%), Positives = 85/325 (26%), Gaps = 57/325 (17%) Query: 4 VTV--ATWNVN------SIRARIHNLAAW--IKENN--PD--IICLQETKTEDKNFPFET 49 + + TWNV S+ L I + D I LQE K + +N + Sbjct: 8 LRIYFVTWNVATKYPEQSLN----KLLDLNNINNSKTLADLYFIGLQEVKAQPQNMVMDI 63 Query: 50 LQSLNY------------HIETCGQKSYNGVAILSKYQPIEIV---------THLPGDDL 88 + +++ Q+ V + + G Sbjct: 64 FFEDPWTKSFREVLKKYDYVKIRTQRLQGLVLNIFCLRKHITHLRSIETQYTRTGCGGMW 123 Query: 89 DVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKIS-WIKRFLRFASQRLELEEP 147 + + PH + + D F + R+ + Sbjct: 124 GNKGAVSIRLNIYGINMCVVNTHLTPHDHLLADRIVDYNTILTNHSFSNPDTSRILFHDY 183 Query: 148 LIFAGDYNII-PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY- 205 + + GD N I + Q M DA +++ + Sbjct: 184 VFWIGDLNFRLHGEDLTATEIDILVKKNQLTTLLAKDQLKMVMEKGDAFAELNESAITFP 243 Query: 206 -SFWDYYADSWSKNKGIR---IDHIM--LSPEATSLLHSARIDTKPRGWTKP--SDHTPV 257 ++ Y S + R D I+ ++ + I + + SDH PV Sbjct: 244 PTY-KYEFASQEFDLKRRPSWTDRILYRVNANIYDDIKLNVIQHNYKSHSNYIQSDHKPV 302 Query: 258 IVSLDI---PEPRK---KQQDSTSQ 276 DI P + Q TS Sbjct: 303 TGEFDIIIRPSIEDYGVEFQPVTSW 327 >gi|71755785|ref|XP_828807.1| pantothenate kinase subunit [Trypanosoma brucei TREU927] gi|70834193|gb|EAN79695.1| pantothenate kinase subunit, putative [Trypanosoma brucei] Length = 1467 Score = 39.0 bits (89), Expect = 0.69, Method: Composition-based stats. Identities = 41/326 (12%), Positives = 75/326 (23%), Gaps = 56/326 (17%) Query: 4 VTVATWNVNSI--------RARIHNLAAWIKENNPDIICLQET----------------- 38 + V ++N N + R RI + + + D+I LQE Sbjct: 35 LRVLSYNFNILPRGCGGFQRERISSFLETVDQY--DVIMLQEVYAASVLPYFLQNRMCFQ 92 Query: 39 KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT 98 K Q + I + A Sbjct: 93 KMLVDELVLRGFQHYAISKQPSYTTMLRNNVFSDNGLIIASRFPIGQRGSYTFRSHERAV 152 Query: 99 FTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP 158 ++ L S + + + S+ ++ + N+ Sbjct: 153 QSVRRGCLFAEVKVPLTSGGEESIIFFNVHLRQEDSDDVTSEHVKETRQFAASVIRNMCS 212 Query: 159 QPHDCYNPI--------------IWENDACFTLEVR----QSFQKLQNMGFTDAIRATHD 200 P D E Q+ DA Sbjct: 213 NPEDVAQIPFVLAGDFDVNGINLHNVGQPTKKYEDLLGELQALGSGVREAVFDAQHRHPP 272 Query: 201 THHLYSFWDYYAD-SWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP----SDHT 255 T F+ + + R D+ +S + + I +P SDH Sbjct: 273 TRPTELFFPTQSKLVRNSFSPQRQDYFFVSHTVA--VKNPDIHKFVSDSQQPYTYLSDHF 330 Query: 256 PVIVSLDIPEPRKKQQDSTSQNMKPI 281 V L IP+ K++ + P+ Sbjct: 331 GVSAVLAIPQTSKQRH----KRWMPL 352 >gi|303236615|ref|ZP_07323196.1| conserved domain protein [Prevotella disiens FB035-09AN] gi|302483119|gb|EFL46133.1| conserved domain protein [Prevotella disiens FB035-09AN] Length = 193 Score = 39.0 bits (89), Expect = 0.69, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 23/54 (42%), Gaps = 3/54 (5%) Query: 21 LAAWIKENNPDIICLQETKTEDK---NFPFETLQSLNYHIETCGQKSYNGVAIL 71 + +I+++N DI+CLQET + N + Y+ N ++ Sbjct: 124 IVKYIQQSNADIVCLQETNVSEAGGRNVYEALVSKYPYYHILHAHSPGNQHMMV 177 >gi|324999709|ref|ZP_08120821.1| hypothetical protein PseP1_13115 [Pseudonocardia sp. P1] Length = 196 Score = 39.0 bits (89), Expect = 0.70, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 22/56 (39%), Gaps = 7/56 (12%) Query: 214 SWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKK 269 SW + GIRIDH+++ + SDH V+V + +P Sbjct: 146 SWPRWAGIRIDHVLVP-------RRSSTHRYAVRELPGSDHRAVLVRVALPGQAPD 194 >gi|217927085|gb|ACK57212.1| CG12034-like protein [Drosophila affinis] Length = 321 Score = 39.0 bits (89), Expect = 0.70, Method: Composition-based stats. Identities = 37/205 (18%), Positives = 62/205 (30%), Gaps = 31/205 (15%) Query: 69 AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYD-DK 127 + + + D + Q + + N +L + +Y + Sbjct: 27 TLFHAWSVNGYFHRIQHADWFGGKGVGLCRILVGDQMVHLYNAHLHAEYDNDNDEYKTHR 86 Query: 128 ISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQ 187 + +F I AGD N PQ + + Sbjct: 87 VIQAFDTAQFIEATRGNSVLQILAGDLNAQPQDISYKVLLYTSK--------------ML 132 Query: 188 NMGFTDAIRATHDTHHLYSFWDYYADSWSKN-KGIRIDHIMLSPEATSLLHSARI----- 241 + +D R H+ Y+ A + SKN +GIRIDHI + + +A I Sbjct: 133 DSCASDTFRTNECDHNSYT----SAKALSKNPRGIRIDHIFVRGG--DNI-NAEIVEYTL 185 Query: 242 ---DTKPRGWTKPSDHTPVIVSLDI 263 D P SDH V+ L + Sbjct: 186 PLPDRVPGQKFSFSDHEAVLAKLKL 210 >gi|242007264|ref|XP_002424462.1| CCR4-NOT transcription complex subunit, putative [Pediculus humanus corporis] gi|212507862|gb|EEB11724.1| CCR4-NOT transcription complex subunit, putative [Pediculus humanus corporis] Length = 656 Score = 39.0 bits (89), Expect = 0.70, Method: Composition-based stats. Identities = 23/207 (11%), Positives = 45/207 (21%), Gaps = 5/207 (2%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL---NYHIETCGQKSYNGVAILSK 73 R + I+ DII LQE E F L L Y + ++ + Sbjct: 69 RKKGILEEIRHYAADIISLQEV--ETDQFYNFFLPELKRDGYDGIFSPKSRAKTMSENDR 126 Query: 74 YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKR 133 + + + + L P + + + Sbjct: 127 KFVDGCAIFYRTAKFSLTKNHLVEFNQLAMANSEGSDHMLNRVMPKDNIGLAALLKTKEA 186 Query: 134 FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTD 193 + AG + + + S Q+ + Sbjct: 187 AWDNGEKSYRYRILTKMAGYQTKEEYWANQSQYNNYNYPSPDPNVGFHSELNFQDTSQYE 246 Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKG 220 + + Y+ Y K G Sbjct: 247 NVPNDSWQANYYTGEGYGVQGEFKTTG 273 >gi|168061234|ref|XP_001782595.1| predicted protein [Physcomitrella patens subsp. patens] gi|162665915|gb|EDQ52584.1| predicted protein [Physcomitrella patens subsp. patens] Length = 614 Score = 39.0 bits (89), Expect = 0.70, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Query: 17 RIHNLAAWIKENNPDIICLQETKTED-KNFPFETLQSLNY 55 R NL I DI+CLQE +++ ++F L+ Y Sbjct: 291 RRQNLLREIVAYRADILCLQEVQSDHYEDFYAPELEKHGY 330 >gi|83414021|emb|CAI30435.1| unspecific 9/13 divinyl ether synthase [Allium sativum] Length = 472 Score = 39.0 bits (89), Expect = 0.70, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 15/60 (25%) Query: 6 VATWNVN---SIRARIHNLAAWIKENNPDIICLQE---------TKTEDKNFPFETLQSL 53 + TW +N IR + L WI + PD LQE ++E+ F ++ + Sbjct: 270 IFTWAINAYLGIRTCLMRLFKWIVASGPD---LQEKLAREVRSVVRSEEGKITFAGIEKM 326 >gi|310799683|gb|EFQ34576.1| endonuclease/Exonuclease/phosphatase [Glomerella graminicola M1.001] Length = 307 Score = 39.0 bits (89), Expect = 0.70, Method: Composition-based stats. Identities = 35/289 (12%), Positives = 67/289 (23%), Gaps = 45/289 (15%) Query: 3 VVTVATWNVNSIR--------------ARIHNLAAWIKENNP----DIICLQETKTEDKN 44 + + T+N IR R L A + ++C+QE + Sbjct: 24 TLRLMTYN---IRWATPVAGPNEAYWSTRRPRLTAQLNYETAGRPESLLCMQEV---VEQ 77 Query: 45 FPFETLQSLNYHIETCGQKSYNGV-------AILSKYQPIEIVTHLPGDDLDVQARFIEA 97 + Q L G +G + Sbjct: 78 QLLDIAQDLGPAWAHVGVGRDDGAAAGEFSPIFYRPDTWDLVENRTYWLSETPDVPGSRG 137 Query: 98 TFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII 157 + + + ++ E + A + Sbjct: 138 WDAALPRIATVASFRHAATGLPLVYM-----CTHFDHEGQTARERSAELLVRLAKGWESG 192 Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTD---AIRATHDTHHLYSFWDYYADS 214 P D P+ D + + D + H T H ++ + Sbjct: 193 SGPEDTAVPVFLGGDLNVEPDNAAYKTLVAEGNLRDASDVVPEAHRTGHSKTYTAFTDVD 252 Query: 215 WSKNKGIRIDHIMLSPEATSLLH--SARIDTKPRGWTKP-SDHTPVIVS 260 W + IDH+ + A + S + SDH PV++ Sbjct: 253 WDD---MLIDHLFVRDPAARGIKFLSHAVLPNRFDDRLFISDHRPVVLD 298 >gi|317047407|ref|YP_004115055.1| endonuclease/exonuclease/phosphatase [Pantoea sp. At-9b] gi|316949024|gb|ADU68499.1| Endonuclease/exonuclease/phosphatase [Pantoea sp. At-9b] Length = 253 Score = 39.0 bits (89), Expect = 0.70, Method: Composition-based stats. Identities = 29/265 (10%), Positives = 63/265 (23%), Gaps = 43/265 (16%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH-IETCGQKS 64 ++N R + L + + DI+ LQE + H I + ++ Sbjct: 21 FTSFN---RRFILPELRDAARATSADIVFLQEV--------------MGTHAIHSLHIEN 63 Query: 65 YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124 + + + G + + N + Sbjct: 64 WPETSHYEFIADTMWHDYAYGRNAVYPEGHHGNAILSRFPIVEYENRDISVAGGENRGML 123 Query: 125 DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ 184 KIS + + L + + + Sbjct: 124 HCKISLPGQPQPLHVICVHLG--------LREPHRRAQLRMMCEMIASLPPDAPLVVAGD 175 Query: 185 KLQNMGFTDAIRATH-DTHHLYSFWDYY-ADSWS-KNKGIRIDHIML-----SPEATSLL 236 + H ++S A ++ + +R+D I + S + Sbjct: 176 FNDWQVRANPYLKRHAGLEEVFSLKSGRPARTFPARFPLLRLDRIYVRNAAISQPWALPV 235 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSL 261 W+ SDH P+ V + Sbjct: 236 K---------PWSHLSDHAPLAVEI 251 >gi|226952709|ref|ZP_03823173.1| endonuclease/exonuclease/phosphatase [Acinetobacter sp. ATCC 27244] gi|226836550|gb|EEH68933.1| endonuclease/exonuclease/phosphatase [Acinetobacter sp. ATCC 27244] Length = 821 Score = 39.0 bits (89), Expect = 0.70, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 24/78 (30%), Gaps = 24/78 (30%) Query: 223 IDHIMLSPEATSLLHSAR---I---------DTKPRGWT------------KPSDHTPVI 258 +DH + S + A I + + SDH PVI Sbjct: 717 LDHAIADSNLYSKVKKAFAWHINADEPTVLDYNEEYKNDEQKALFFAEDPYRSSDHDPVI 776 Query: 259 VSLDIPEPRKKQQDSTSQ 276 V +D+ +P K S Sbjct: 777 VDIDLQDPENKPSTQKSS 794 >gi|147866531|emb|CAN81579.1| hypothetical protein VITISV_023185 [Vitis vinifera] Length = 1232 Score = 39.0 bits (89), Expect = 0.70, Method: Composition-based stats. Identities = 11/61 (18%), Positives = 22/61 (36%), Gaps = 9/61 (14%) Query: 201 THHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 +++ N+ R+D ++SP T+ R SDH P+++ Sbjct: 59 QGGEFTW-----SGGLNNQAWARLDRFLVSPSWLDQFSGV---TQGRLSRPTSDHFPIVL 110 Query: 260 S 260 Sbjct: 111 E 111 >gi|147780543|emb|CAN69124.1| hypothetical protein VITISV_026287 [Vitis vinifera] Length = 1048 Score = 39.0 bits (89), Expect = 0.70, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 21/41 (51%), Gaps = 2/41 (4%) Query: 4 VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTED 42 + + WNV + + + ++ PD++CL ETK ++ Sbjct: 3 IKILRWNVCGLNDSEKRKLIKGVVRNQKPDLVCLLETKVKE 43 >gi|255721849|ref|XP_002545859.1| hypothetical protein CTRG_00640 [Candida tropicalis MYA-3404] gi|240136348|gb|EER35901.1| hypothetical protein CTRG_00640 [Candida tropicalis MYA-3404] Length = 436 Score = 39.0 bits (89), Expect = 0.71, Method: Composition-based stats. Identities = 42/316 (13%), Positives = 92/316 (29%), Gaps = 46/316 (14%) Query: 4 VTVATWNVNSIR-------ARIHNLAAWI-----KENNPDIICLQETKTEDKNFPFETLQ 51 + + T+N ++ R+ +A + ++++ DI+ LQE E+ + + Sbjct: 19 IKLLTFNTWGLKYISKFRKQRLRAIADSLANPASEDDDYDIVALQEVWCEEDWQYLDLVC 78 Query: 52 SLNY---HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108 + Y I G S G+A+LSK E + + A F + + + + Sbjct: 79 RVRYPYRRIFRSGIVSGPGLAVLSKIPVTETFLYRFPINGRPSAFFRGDFYVGKSIAVTM 138 Query: 109 GN--------------LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDY 154 ++ + F + + +I GD Sbjct: 139 FQPQHADILPIALLNSHMHAPYGKGDASYSTHRACQAWDFAKLVRMLKKAGYAVIQVGDL 198 Query: 155 NIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH------DTHHLYSFW 208 N P I + + + ++ L ++ Sbjct: 199 NSTPDSLPYKLFTIEGGLSDSWNILNKDRVIPNEEIAKLSLEDQILLAGVTCNSRLNTWR 258 Query: 209 DYYADSWSKNKGIRIDHIMLSPE----ATSLLHSARIDT-KPRGWTKPSDHTPVIVSLDI 263 W R+D+ ++ + + +D P SDH V L + Sbjct: 259 STRPL-WEA---CRLDYALIDAANITPIDAKVK--FVDKLNPPFRCSYSDHFAYSVDLVV 312 Query: 264 PEPRKKQQDSTSQNMK 279 ++ S+ N + Sbjct: 313 NSINNRKSYSSGANDE 328 >gi|169787230|gb|ACA80054.1| putative DNA lyase [Colletotrichum axonopodi] Length = 233 Score = 39.0 bits (89), Expect = 0.71, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 22/57 (38%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81 + DI+ +QETK + K+ + + + + K G + ++ Y Sbjct: 2 FEILEADIVVMQETKIQRKDLRDDMVLVPGWDVAFSLPKHKKGYSGVAIYTRNATCC 58 >gi|169787198|gb|ACA80038.1| putative DNA lyase [Colletotrichum hanaui] gi|169787210|gb|ACA80044.1| putative DNA lyase [Colletotrichum hanaui] gi|169787260|gb|ACA80069.1| putative DNA lyase [Colletotrichum hanaui] gi|169787306|gb|ACA80092.1| putative DNA lyase [Colletotrichum hanaui] Length = 233 Score = 39.0 bits (89), Expect = 0.71, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 22/57 (38%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81 + DI+ +QETK + K+ + + + + K G + ++ Y Sbjct: 2 FEILEADIVVMQETKIQRKDLRDDMVLVPGWDVAFSLPKHKKGYSGVAIYTRNATCC 58 >gi|124359184|gb|ABN05702.1| reverse transcriptase - beet retrotransposon, putative [Medicago truncatula] Length = 384 Score = 39.0 bits (89), Expect = 0.71, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 8/57 (14%) Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 +++ Y+++ S RIDH+++S E + + PR SDH P+++ Sbjct: 149 RKFTW--YHSNGRSM---SRIDHVLVSDEWKRAWGDSALWVLPRDV---SDHCPLVL 197 >gi|82793510|ref|XP_728069.1| endonuclease/exonuclease/phosphatase [Plasmodium yoelii yoelii str. 17XNL] gi|23484232|gb|EAA19634.1| Endonuclease/Exonuclease/phosphatase family, putative [Plasmodium yoelii yoelii] Length = 827 Score = 39.0 bits (89), Expect = 0.72, Method: Composition-based stats. Identities = 26/225 (11%), Positives = 47/225 (20%), Gaps = 16/225 (7%) Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 Y + + K + F Q +R+ +Y Sbjct: 603 YDTFIKISDDLDEIINEIKTVYQIGIFMHNNSQNIFIIANTHLYFHSLAQHIRVIQVYCM 662 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII------ 168 K + + Sbjct: 663 LHILEKIKNKYKDKYKNKEIYVILNGDFNTNFESEVFSFLQGNDVMENSKLWENGKLFKK 722 Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFW---DYYADSWSKNKGIRIDH 225 +D + + LYS + D +W+ N +D+ Sbjct: 723 EYDDLNKYPTLFNIDNNSNDQKINGPYLNRKKFLPLYSAYKKVDIPYTNWNNNFIDVLDY 782 Query: 226 IMLSPEATSLLHSARIDTKPRGWTK-------PSDHTPVIVSLDI 263 I LSPE +D K PSDH + +++ Sbjct: 783 IFLSPELKVKRVLKGVDKDIFDQYKGIVSPFNPSDHLSIAAEIEL 827 >gi|144897769|emb|CAM74633.1| Metal-dependent hydrolase [Magnetospirillum gryphiswaldense MSR-1] Length = 382 Score = 39.0 bits (89), Expect = 0.72, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 20/47 (42%), Gaps = 10/47 (21%) Query: 5 TVATWNVNSIRARIHNLAAW----------IKENNPDIICLQETKTE 41 +AT+N+ S+ R+ + ++ DI+CLQE Sbjct: 58 RLATFNLESLDDRLSGADDFADRMAVLRPQLQRLRADILCLQEVNAH 104 Score = 39.0 bits (89), Expect = 0.85, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 12/56 (21%) Query: 218 NKGIR--IDHIMLSPEATSLLHSARIDTKPRG---------WTKP-SDHTPVIVSL 261 + G R +DHI++S L + I + G WT P S H P++ Sbjct: 324 HHGQRVMLDHILVSRPLLGCLAACEIHNETLGDELVGPATVWTAPDSFHAPMVAEF 379 >gi|261819592|ref|YP_003257698.1| endonuclease/exonuclease/phosphatase [Pectobacterium wasabiae WPP163] gi|261603605|gb|ACX86091.1| Endonuclease/exonuclease/phosphatase [Pectobacterium wasabiae WPP163] Length = 381 Score = 39.0 bits (89), Expect = 0.73, Method: Composition-based stats. Identities = 17/90 (18%), Positives = 28/90 (31%), Gaps = 31/90 (34%) Query: 200 DTHHLYSFWDYYADSWSKNKGIRI---DHIMLSPEATSLLHSARIDT------------- 243 Y++ Y+A KG R+ D+I LS + ++ Sbjct: 296 PEKERYTY--YFAGGK---KGARLNQLDYIFLSAPLHQAMVGWGVERRGIYNIDKIAAKE 350 Query: 244 ---------KPRGWTKP-SDHTPVIVSLDI 263 + W SDH + V +DI Sbjct: 351 GAEPVTPLPEVTSWDTAASDHAALWVEVDI 380 >gi|220911600|ref|YP_002486909.1| 5'-nucleotidase domain protein [Arthrobacter chlorophenolicus A6] gi|219858478|gb|ACL38820.1| 5'-Nucleotidase domain protein [Arthrobacter chlorophenolicus A6] Length = 1512 Score = 39.0 bits (89), Expect = 0.73, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 24/66 (36%), Gaps = 21/66 (31%) Query: 223 IDHIMLSPEATSLLHSARI---------------------DTKPRGWTKPSDHTPVIVSL 261 +DHI+ SP A ++ A I + + SDH PV+V L Sbjct: 783 LDHILASPAANGVVTGADIWNINSVESVALEYSRYNNNVTNYYAPDQFRASDHDPVVVGL 842 Query: 262 DIPEPR 267 D+ Sbjct: 843 DLKSAP 848 >gi|194383744|dbj|BAG59230.1| unnamed protein product [Homo sapiens] Length = 231 Score = 39.0 bits (89), Expect = 0.73, Method: Composition-based stats. Identities = 39/260 (15%), Positives = 67/260 (25%), Gaps = 48/260 (18%) Query: 19 HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIE 78 L +++ +PD+I LQE P Y+ + S + + Sbjct: 3 RALNSYLALYSPDVIFLQEV------IPP-------YYSYLKKRSSNYEIITGHEEGYFT 49 Query: 79 IVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFA 138 + I T + L ++ + T + + Sbjct: 50 AIMLKKSRVKLKSQEIIPFPSTKMMRNLLCVHVNVSGNELCLMTSHLESTRGHAAERMNQ 109 Query: 139 SQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT 198 + + + Q +I+ D L N Sbjct: 110 LKMVLKKM------------QEAPESATVIFAGDTNLRDREVTRCGGLPNNIVDVWEFLG 157 Query: 199 HDTHHLYSFWDYYADSWSKNKG------IRIDHIMLSPEATSLLHSARIDT---KPRGWT 249 H Y+ WD +S N G +R D I + I G Sbjct: 158 KPKHCQYT-WDTQMNS---NLGITAACKLRFDRIF----FRAAAEEGHIIPRSLDLLGLE 209 Query: 250 K------PSDHTPVIVSLDI 263 K PSDH ++ +LDI Sbjct: 210 KLDCGRFPSDHWGLLCNLDI 229 >gi|325962168|ref|YP_004240074.1| extracellular nuclease [Arthrobacter phenanthrenivorans Sphe3] gi|323468255|gb|ADX71940.1| putative extracellular nuclease [Arthrobacter phenanthrenivorans Sphe3] Length = 1467 Score = 39.0 bits (89), Expect = 0.73, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 24/62 (38%), Gaps = 21/62 (33%) Query: 223 IDHIMLSPEATSLLHSARI---------------------DTKPRGWTKPSDHTPVIVSL 261 +DHI+ SP A + + A I + + SDH PVIV L Sbjct: 738 LDHILASPAADAAVTGADIWNINSVESVALEYSRYNSNITNYYAPDQYRASDHDPVIVGL 797 Query: 262 DI 263 D+ Sbjct: 798 DL 799 >gi|294776759|ref|ZP_06742223.1| oxidoreductase, NAD-binding domain protein [Bacteroides vulgatus PC510] gi|294449414|gb|EFG17950.1| oxidoreductase, NAD-binding domain protein [Bacteroides vulgatus PC510] Length = 502 Score = 39.0 bits (89), Expect = 0.74, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 32/104 (30%), Gaps = 9/104 (8%) Query: 151 AGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWD- 209 D I + + +I EN E+ Q + H+L FWD Sbjct: 159 CWDL-INLSEKNRKHCMILENCCYDWFEMNTLNMAQQGVFGEVIRAQGAYIHNLSPFWDH 217 Query: 210 YYADSWSKNKGIRIDH-------IMLSPEATSLLHSARIDTKPR 246 Y+ + G R+D+ + + + + I R Sbjct: 218 YWKNGKEDKLGWRLDYNMKHRGDVYATHGLGPVAQALDIHRGDR 261 >gi|325179666|emb|CCA14064.1| carbon catabolite repressor protein putative [Albugo laibachii Nc14] Length = 607 Score = 39.0 bits (89), Expect = 0.75, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 21/55 (38%), Gaps = 6/55 (10%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKN-FPFETLQSLNYHIET 59 V +WN R L + N DI+CLQE + + F + + Y Sbjct: 281 VLSWN-----FRKELLKNELHSYNADILCLQEVQGDHYKTFFYPMMSEWGYDGWY 330 >gi|284121624|ref|ZP_06386820.1| Endonuclease/exonuclease/phosphatase [Candidatus Poribacteria sp. WGA-A3] gi|283829405|gb|EFC33793.1| Endonuclease/exonuclease/phosphatase [Candidatus Poribacteria sp. WGA-A3] Length = 378 Score = 39.0 bits (89), Expect = 0.75, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 14/66 (21%) Query: 211 YADSWSKNKGIRIDHIMLSPEATS-LLHSARI--------DTKPRGWTKP-----SDHTP 256 + + +G +DH++++ + T SAR+ + +G P SDH P Sbjct: 308 RCSHYFRGRGEWLDHVLVAKDMTEMRTRSARVTGYCAVAGCRRIKGEYPPAYRRLSDHCP 367 Query: 257 VIVSLD 262 VI+ +D Sbjct: 368 VIIEID 373 >gi|169787350|gb|ACA80114.1| putative DNA lyase [Colletotrichum cereale] Length = 233 Score = 39.0 bits (89), Expect = 0.75, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 22/57 (38%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81 + DI+ +QETK + K+ + + + + K G + ++ Y Sbjct: 2 FEILGADIVVMQETKIQRKDLHDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATCC 58 >gi|169787220|gb|ACA80049.1| putative DNA lyase [Colletotrichum cereale] gi|169787222|gb|ACA80050.1| putative DNA lyase [Colletotrichum cereale] gi|169787366|gb|ACA80122.1| putative DNA lyase [Colletotrichum cereale] gi|169787368|gb|ACA80123.1| putative DNA lyase [Colletotrichum cereale] gi|169787370|gb|ACA80124.1| putative DNA lyase [Colletotrichum cereale] gi|169787452|gb|ACA80165.1| putative DNA lyase [Colletotrichum cereale] gi|169787454|gb|ACA80166.1| putative DNA lyase [Colletotrichum cereale] Length = 233 Score = 39.0 bits (89), Expect = 0.75, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 22/57 (38%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81 + DI+ +QETK + K+ + + + + K G + ++ Y Sbjct: 2 FEILGADIVVMQETKIQRKDLHDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATCC 58 >gi|254505117|ref|ZP_05117268.1| endonuclease/exonuclease/phosphatase family [Labrenzia alexandrii DFL-11] gi|222441188|gb|EEE47867.1| endonuclease/exonuclease/phosphatase family [Labrenzia alexandrii DFL-11] Length = 324 Score = 39.0 bits (89), Expect = 0.75, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 10/48 (20%) Query: 4 VTVATWNVNS----------IRARIHNLAAWIKENNPDIICLQETKTE 41 + +AT+N+ S + RI L + E DI+CLQE + Sbjct: 1 MKLATFNLESFGTDRIDEDLLARRIDALRPKLLELEADILCLQEVNAQ 48 >gi|156358597|ref|XP_001624603.1| predicted protein [Nematostella vectensis] gi|156211394|gb|EDO32503.1| predicted protein [Nematostella vectensis] Length = 159 Score = 39.0 bits (89), Expect = 0.75, Method: Composition-based stats. Identities = 21/139 (15%), Positives = 42/139 (30%), Gaps = 9/139 (6%) Query: 125 DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ 184 + L+ + LI GD N + + Sbjct: 27 EHLKDEFYTRLQEVLDSRNQHDMLIITGDMNAKVGDQKWDYKRVMQKHGLGVRNDNGELC 86 Query: 185 KLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK 244 L + T + H ++ D +KN+ IDH++++ + + R+ Sbjct: 87 DLNELVITGRLFPHRTIHKA-TWIS--PDGKTKNQ---IDHVLVNKRFRNSVKDTRVF-- 138 Query: 245 PRGWTKPSDHTPVIVSLDI 263 R SDH V ++ + Sbjct: 139 -RSADVGSDHYLVCATVKL 156 >gi|53749387|gb|AAU90246.1| hypothetical protein [Oryza sativa Japonica Group] Length = 1275 Score = 39.0 bits (89), Expect = 0.75, Method: Composition-based stats. Identities = 39/252 (15%), Positives = 81/252 (32%), Gaps = 36/252 (14%) Query: 12 NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAIL 71 NS AR L IK + DI+ LQETK +NF L S + ++ Sbjct: 442 NS--ARRGLLKEMIKLRDIDIVGLQETK--RENFSNRELNS--FQGSKTFSWAWKASRGA 495 Query: 72 SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWI 131 S + + T + + + + K++ K I Sbjct: 496 SGGILLGVNTDKVELIRNHVGAYFL--------------------SCVIRHKFNQKTWEI 535 Query: 132 KRFLRFASQRLELEEPLIFAGDYNIIPQPH---DCYNPIIWENDACFTLEVRQSFQKLQN 188 + L+ + P P +NP + + + ++ + Sbjct: 536 VVVYGPVTDSLKQSFLSELSWHLQDSPHPFIIGGDFNPYRFAKEKSNSNLDFRAMDLFNS 595 Query: 189 MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGW 248 + H + ++F D ++ +D +++S ++ + + + R Sbjct: 596 FILDMDLSELHRSGARFTF-TNKQDCPTQEV---LDRVLVSQLWEAIYPISTLLSITR-- 649 Query: 249 TKPSDHTPVIVS 260 SDH+P+I+ Sbjct: 650 -IGSDHSPLILD 660 >gi|325181322|emb|CCA15737.1| PREDICTED: similar to pollike protein putative [Albugo laibachii Nc14] Length = 848 Score = 39.0 bits (89), Expect = 0.77, Method: Composition-based stats. Identities = 41/235 (17%), Positives = 68/235 (28%), Gaps = 36/235 (15%) Query: 10 NVNSIRARIHNLAAWIKENNPDIICLQETKTED------------KNFPFETL-QSLNYH 56 N N ++ H I I C+QET+ D FP ++ N Sbjct: 297 NTNGVKQDGHLFIQNIVSKYA-ICCVQETRFRDNRHLETFRFHLASTFPSKSFVSDTNSL 355 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 + NGV + + T L V R++ TI + I N+Y P Sbjct: 356 HSHPFRARVNGVMTIIRTDFPGSDTAEALRTLSVTNRYLVVRLTILGAPVYIHNVYAPVD 415 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 ++ + I GD N P + + Sbjct: 416 PTERKPFFEQVSTGSFEQHAT----------HIVCGDLNTTLCPRLDRSS----GASRHE 461 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 + L N+G A H +++ + R+D+I+LS Sbjct: 462 PSRLSCLEWLSNLGVLYAWHLHHPDERVFTGPQPRKN--------RLDYILLSES 508 >gi|298376437|ref|ZP_06986392.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_19] gi|298266315|gb|EFI07973.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 3_1_19] Length = 628 Score = 39.0 bits (89), Expect = 0.79, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 22/43 (51%), Gaps = 7/43 (16%) Query: 2 SVVTVATWNV-NSIR-----ARIHNLAAWIKENNPDIICLQET 38 + + + ++N+ N R + +A I++ PD++ +QE Sbjct: 40 NTLRIMSYNIRNG-RGMDEVTDLGRIAEAIRKVAPDVVAVQEV 81 >gi|265751343|ref|ZP_06087406.1| glycosyl hydrolase family 109 protein 5 [Bacteroides sp. 3_1_33FAA] gi|263238239|gb|EEZ23689.1| glycosyl hydrolase family 109 protein 5 [Bacteroides sp. 3_1_33FAA] Length = 520 Score = 39.0 bits (89), Expect = 0.79, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 32/104 (30%), Gaps = 9/104 (8%) Query: 151 AGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWD- 209 D I + + +I EN E+ Q + H+L FWD Sbjct: 177 CWDL-INLSEKNRKHCMILENCCYDWFEMNTLNMAQQGVFGEIIRAQGAYIHNLSPFWDH 235 Query: 210 YYADSWSKNKGIRIDH-------IMLSPEATSLLHSARIDTKPR 246 Y+ + G R+D+ + + + + I R Sbjct: 236 YWKNGKEDKLGWRLDYNMKHRGDVYATHGLGPVAQALDIHRGDR 279 >gi|198422688|ref|XP_002131393.1| PREDICTED: hypothetical protein [Ciona intestinalis] Length = 321 Score = 39.0 bits (89), Expect = 0.79, Method: Composition-based stats. Identities = 35/292 (11%), Positives = 73/292 (25%), Gaps = 50/292 (17%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDK-NFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75 RI + + D+I L E + ++K F + L++ + + + Sbjct: 35 RIKVTIDNLAKLKADVIALNEIRIKEKVEFTKQLLENKGFSVFLFWNNENDMSFRNIIAI 94 Query: 76 PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG-NLYLPHGNPITSTKYDDKISWIKRF 134 + + + + + ++ I + + + D K Sbjct: 95 SKQSKWNQTKWEHKWVSVNEQNQPCLSNVFSTIQGDQHGRCVGIVYLQHKDTKKQVCVAV 154 Query: 135 LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNM----- 189 NI D I D E ++ FQ+ Sbjct: 155 SHVVPFGEVKYLQQKALMSLNIDNHKLDPPVSTIIAGDLNRFDEDKEIFQQQIKNFKLQE 214 Query: 190 ---------GFTDAIRATHDTHHLYSFW----------DYYADSWSKNKGIRIDHIMLSP 230 + + T+ ++ W Y A S +K +D + S Sbjct: 215 LQFSKLVIKHSQNNLIRTNKDVGTFNPWPVDKMLYEDKSYMAQPMSYSK---LDLQVCSN 271 Query: 231 EATSLLHSARID-------------------TKPRGWTKPSDHTPVIVSLDI 263 + T + A + SDH V+ +I Sbjct: 272 DMT--IKQAEVHASMLKPPNLTEPSPGVNEVRHILDKVMSSDHLAVLGEYEI 321 >gi|147866881|emb|CAN78850.1| hypothetical protein VITISV_013214 [Vitis vinifera] Length = 1074 Score = 39.0 bits (89), Expect = 0.79, Method: Composition-based stats. Identities = 10/61 (16%), Positives = 22/61 (36%), Gaps = 9/61 (14%) Query: 201 THHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 +++ + N+ R+D ++SP + R SDH P+++ Sbjct: 138 QGEKFTW-----NGGLNNQAWARLDKFLVSPSWLDQFSGVI---QSRLSRPISDHFPIVL 189 Query: 260 S 260 Sbjct: 190 E 190 >gi|115963747|ref|XP_001185059.1| PREDICTED: similar to reverse transcriptase-like protein [Strongylocentrotus purpuratus] Length = 2519 Score = 39.0 bits (89), Expect = 0.79, Method: Composition-based stats. Identities = 15/36 (41%), Positives = 23/36 (63%) Query: 9 WNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKN 44 WN NS+R + + L +I ENN DI+ L ET + ++ Sbjct: 110 WNCNSLRNKTYLLTDYILENNVDIMFLTETWLKSED 145 >gi|108759756|ref|YP_628914.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus xanthus DK 1622] gi|108463636|gb|ABF88821.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus xanthus DK 1622] Length = 360 Score = 39.0 bits (89), Expect = 0.79, Method: Composition-based stats. Identities = 38/336 (11%), Positives = 82/336 (24%), Gaps = 67/336 (19%) Query: 2 SVVTVATWNVN-------SIRARI---HNLAAWIKENNP--DIICLQETKTE-------- 41 S + + T+NV + + + +AA + +P D++CLQE +T Sbjct: 34 SPLRIVTYNVRYFGHMLRGLASTVGPKRRVAAALASLDPLPDVVCLQEVETSSLRSNIAD 93 Query: 42 ------DKNFPF------ETLQSLN----YHIETCGQKSY---------NGVAILSKYQP 76 + ET L Y Y G+A+L + Sbjct: 94 RPKQPGETQLTAFMGRMVETFDRLGREMPYEAFYFRAHHYKLREVSLYTTGLAVLVNTRK 153 Query: 77 IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDK-------IS 129 +E+ TH G + ++ + L + ++ Sbjct: 154 LEVATHNVGAPQAITHHHVQRLKDRKQSRICAHMRLLRREDRHPFHIFNTHLSLPTPFAR 213 Query: 130 WIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNM 189 + ++ + Y N + R + Sbjct: 214 EFWATRDKMGGGVNQLHEARKLTEFMQGLTGDEPYIVCGDFNSPPASPVYRYLTTDGRLT 273 Query: 190 GFTDAIRATHDTHHLYSFWDYYADSWSK----NKGIRIDHIMLSPEATSL-LHSARIDTK 244 A+ + + + + +DH+ L Sbjct: 274 CAQAAVGQIDPNV---------SRGFPTAGFLHMRMHLDHVFSGAGVRWLDTQETSPFGD 324 Query: 245 PRGWTKP-SDHTPVIVSLDIPEPRKKQQDSTSQNMK 279 R SDH P++ + + + + Sbjct: 325 LRSRFHGLSDHMPIVARFALDSGKTLITPPPTSLLL 360 >gi|56758758|gb|AAW27519.1| SJCHGC06222 protein [Schistosoma japonicum] Length = 213 Score = 39.0 bits (89), Expect = 0.79, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 28/92 (30%), Gaps = 2/92 (2%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDK--NFPFETLQSLNYHIETCGQKSYNGVAILSKY 74 R++ +A+ + + D+I LQE E Y G+ I SK+ Sbjct: 28 RVNAIASKLANGDFDVILLQEIWLESDYRKLRLLLDDKYPYSNYFYCNLIGTGMCIFSKW 87 Query: 75 QPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 + TH + + L Sbjct: 88 IIECVFTHPFTTNGYPHLIHQADYYCGKGIGL 119 >gi|45267888|gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group] gi|54291856|gb|AAV32224.1| hypothetical protein [Oryza sativa Japonica Group] Length = 1936 Score = 39.0 bits (89), Expect = 0.79, Method: Composition-based stats. Identities = 31/283 (10%), Positives = 80/283 (28%), Gaps = 34/283 (12%) Query: 4 VTVATWNVNSI--RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 ++ WN + A + +L A I++ ++ L ET+ + + Sbjct: 636 MSCLAWNCRGLGNTATVQDLRALIQKAGSQLVFLCETRQSVEKMSRLRRKLAFRGFVGVS 695 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 + +G L + + + + T +G P Sbjct: 696 SEGKSGGLALYWDESVSVDVKDINKRYIDAYVRLSPDEPQWHITFV-------YGEPRVE 748 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 ++ A + + + + + + +++ Sbjct: 749 NRHRMWSLLRTIRQSSALPWMVIGDFNETLWQFE------------HFSKNPRCETQMQN 796 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 L + D +D D W +N +R+D + + L A++ Sbjct: 797 FRDALYDCDLQDLGFKGVPHT-----YDNRRDGW-RNVKVRLDRAVADDKWRDLFPEAQV 850 Query: 242 DTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTS----QNMKP 280 + SDH+P+++ + + + +Q +P Sbjct: 851 SHLV---SPCSDHSPILLEFIVKDTTRPRQKCLHYEIVWEREP 890 >gi|303314689|ref|XP_003067353.1| Endonuclease/Exonuclease/phosphatase family protein [Coccidioides posadasii C735 delta SOWgp] gi|240107021|gb|EER25208.1| Endonuclease/Exonuclease/phosphatase family protein [Coccidioides posadasii C735 delta SOWgp] Length = 290 Score = 39.0 bits (89), Expect = 0.80, Method: Composition-based stats. Identities = 33/262 (12%), Positives = 67/262 (25%), Gaps = 27/262 (10%) Query: 17 RIHNLAAWI---KENNPD-IICLQET-KTEDKNFPFETLQSLNYHIETCGQKSYNGVAIL 71 R H + + +N + ICLQE + + + + L LN H +T Sbjct: 33 RKHLVLNELIFHTRHNAESFICLQEVLRVQLE----DVLSGLNSHGDTWAYIGVGRDDGK 88 Query: 72 SKYQPIEIVTHLPGD--------DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 + I L + + + ++ + T Sbjct: 89 QAGEYSPIFYRPDVWKLETWETVWLSETPEVPSKGWDAASIRIVTVGVFRHRASRKTVLA 148 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + R+ S +L L + + E + Sbjct: 149 MSTHLDDQGSKSRYESAKLILRTIDGYLHKFKDRISGLFLAGDFNSEVNQEAYQVFIDPT 208 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP----EATSLLHSA 239 L + + Y+ + Y + + RID+I++ P + Sbjct: 209 SPLVDARDQIKPDERYGNEITYTGFGYEGERET-----RIDYILVGPKTEQGFPWTVKQY 263 Query: 240 RIDTKPRGWTKP-SDHTPVIVS 260 + SDH V+ Sbjct: 264 GVLPNKFDDGVFSSDHRAVVAD 285 >gi|114762656|ref|ZP_01442090.1| endonuclease/exonuclease/phosphatase family protein [Pelagibaca bermudensis HTCC2601] gi|114544566|gb|EAU47572.1| endonuclease/exonuclease/phosphatase family protein [Roseovarius sp. HTCC2601] Length = 333 Score = 39.0 bits (89), Expect = 0.80, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 12/53 (22%) Query: 223 IDHIMLSPEATSLLHSARIDT---KPRGWTKP---------SDHTPVIVSLDI 263 +D+IM+S + S RI P W P SDH PV + +D+ Sbjct: 281 LDYIMVSEDLARTRPSWRIWHPFDDPVCWRTPELREALLDASDHFPVTLDIDL 333 >gi|326672568|ref|XP_003199694.1| PREDICTED: RNA-directed DNA polymerase from mobile element jockey-like [Danio rerio] Length = 1049 Score = 39.0 bits (89), Expect = 0.81, Method: Composition-based stats. Identities = 31/243 (12%), Positives = 68/243 (27%), Gaps = 14/243 (5%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLP 84 + N DI LQET+ D E + ++ + + + + P Sbjct: 25 LLRLNVDIAALQETRLADSGTLKE--KDYTFYWQGRAPDEPRQHGVAFAVKNNLLSMVEP 82 Query: 85 GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL 144 G + + + T TL + T K+ ++ + + Q + L Sbjct: 83 GRNGTERLLTLRLNTTTGPLTLVSVYAPTLNATLETKDKFYGNLTSVINNIPDKEQLVLL 142 Query: 145 EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL 204 F + + N+ ++ T H + Sbjct: 143 G---DFNARVGANHESWPSCLGKFGIGKMNENGQRLLELCAFHNLCIANSYFQTKPQHKV 199 Query: 205 YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 S+ + W + +D I++ A + + +DH+ V + + Sbjct: 200 -SWRHPRSKHWHQ-----LDLILVRRSAINCVLHV---RSYHSADCDTDHSLVCCKIRLN 250 Query: 265 EPR 267 R Sbjct: 251 PKR 253 >gi|295090629|emb|CBK76736.1| Metal-dependent hydrolase [Clostridium cf. saccharolyticum K10] Length = 324 Score = 39.0 bits (89), Expect = 0.81, Method: Composition-based stats. Identities = 36/305 (11%), Positives = 72/305 (23%), Gaps = 56/305 (18%) Query: 4 VTVATWNVNSIR-----ARIHNLAAWIKENNPDIICLQETK--TEDKNFPFETLQSLNYH 56 + + T N +S+ ++ I + PD+I LQE + + E L+ + Sbjct: 1 MKLLTLNTHSLEEKDYEKKLKIFTEEILKEKPDVIALQEVNQPLDGEEADGEVLKKSGFI 60 Query: 57 -IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + V + + + G + + + + + + + Sbjct: 61 PCPSEPPSCAVPVRLGNHGLRAAQLLRRSGFPVFWTWTSAKVGYGKYDEGMALMSRRPIA 120 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + K A + + + + Sbjct: 121 EVSQLFLTDGRDYNNWKTRKALAITLNIGKGEEPVS--FVTAHMGWWKDEEEPFSRQWER 178 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHL-Y-----SFWD--YYADSWSKN--------- 218 S ++ ++ Y S W Y A Sbjct: 179 LDAFASSLRRRADVWLMGDFNTQDSVRGEGYDRITASGWTDAYRAAGKRDGGITVPGAID 238 Query: 219 --------KGIRIDHIMLSPEATSLLHSARIDTKPRGW---------------TKPSDHT 255 G+RID+I H + D K RG SDH Sbjct: 239 GWREDGEVPGMRIDYIW-----YGRKHDSG-DRKSRGDVLIEEVRTVFNGSDCPAVSDHF 292 Query: 256 PVIVS 260 V+ Sbjct: 293 GVLAE 297 >gi|326667425|ref|XP_003198594.1| PREDICTED: RNA-directed DNA polymerase from mobile element jockey-like [Danio rerio] Length = 1049 Score = 39.0 bits (89), Expect = 0.81, Method: Composition-based stats. Identities = 31/243 (12%), Positives = 68/243 (27%), Gaps = 14/243 (5%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLP 84 + N DI LQET+ D E + ++ + + + + P Sbjct: 25 LLRLNVDIAALQETRLADSGTLKE--KDYTFYWQGRAPDEPRQHGVAFAVKNNLLSMVEP 82 Query: 85 GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL 144 G + + + T TL + T K+ ++ + + Q + L Sbjct: 83 GRNGTERLLTLRLNTTTGPLTLVSVYAPTLNATLETKDKFYGNLTSVINNIPDKEQLVLL 142 Query: 145 EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL 204 F + + N+ ++ T H + Sbjct: 143 G---DFNARVGANHESWPSCLGKFGIGKMNENGQRLLELCAFHNLCIANSYFQTKPQHKV 199 Query: 205 YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 S+ + W + +D I++ A + + +DH+ V + + Sbjct: 200 -SWRHPRSKHWHQ-----LDLILVRRSAINCVLHV---RSYHSADCDTDHSLVCCKIRLN 250 Query: 265 EPR 267 R Sbjct: 251 PKR 253 >gi|325925887|ref|ZP_08187256.1| putative extracellular nuclease [Xanthomonas perforans 91-118] gi|325543718|gb|EGD15132.1| putative extracellular nuclease [Xanthomonas perforans 91-118] Length = 572 Score = 39.0 bits (89), Expect = 0.81, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 14/56 (25%) Query: 222 RIDHIMLSPEATSLLHSA---RIDTKPR-----------GWTKPSDHTPVIVSLDI 263 R+DH +LSP L A I+ G + SDH PV+++ + Sbjct: 517 RLDHALLSPAMAKQLRGAAEWHINADVMDDAGYAKRNLPGPWRSSDHDPVLLAFSL 572 >gi|254883062|ref|ZP_05255772.1| glycosyl hydrolase family 109 protein 5 [Bacteroides sp. 4_3_47FAA] gi|254835855|gb|EET16164.1| glycosyl hydrolase family 109 protein 5 [Bacteroides sp. 4_3_47FAA] Length = 508 Score = 39.0 bits (89), Expect = 0.81, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 31/104 (29%), Gaps = 9/104 (8%) Query: 151 AGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWD- 209 D I + +I EN E+ Q + H+L FWD Sbjct: 165 CWDL-INLSEKTRKHCMILENCCYDWFEMNTLNMAQQGVFGEVIRAQGAYIHNLSPFWDH 223 Query: 210 YYADSWSKNKGIRIDH-------IMLSPEATSLLHSARIDTKPR 246 Y+ + G R+D+ + + + + I R Sbjct: 224 YWKNGKEDKLGWRLDYNMKHRGDVYATHGLGPVAQALDIHRGDR 267 >gi|315636836|ref|ZP_07892061.1| endonuclease/exonuclease/phosphatase [Arcobacter butzleri JV22] gi|315478890|gb|EFU69598.1| endonuclease/exonuclease/phosphatase [Arcobacter butzleri JV22] Length = 526 Score = 39.0 bits (89), Expect = 0.82, Method: Composition-based stats. Identities = 44/282 (15%), Positives = 75/282 (26%), Gaps = 39/282 (13%) Query: 34 CLQETKTED-KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQA 92 LQE + +D + L Y S G+ LSK + + + Sbjct: 79 GLQEIENKDLMQLLQKKLPKYKYFSFIKYPDSAVGLGFLSKVEIKNSSSIDVKFTDKLFR 138 Query: 93 RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG 152 +E TF +I N + P + + + R +L + I G Sbjct: 139 PILETTFIYENIEFKIFNNHWPSKAAAENYRIKYAKTLQDR-----LLKLPKDYDYILLG 193 Query: 153 DYNIIPQPHD-CYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFW--- 208 D+N + + + T + + T + Y+ W Sbjct: 194 DFNSNYNEFETFKKDLKLNLTSGVTGINHVLNTIIDDHFITYDDILKEEKKVHYNLWLDI 253 Query: 209 --DYYADSWSKNKGIRIDHIMLSPEATSL------LHSARIDT----------------- 243 + KN+ D+I+LS S + Sbjct: 254 KTSERFSTKFKNQNNTPDNIILSSSLFDNKNLTYIKKSFEVFKPNYLYENGEVKRWKMTQ 313 Query: 244 ----KPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 K SDH P+ I E K +N+ I Sbjct: 314 DRNIKIHKGEGFSDHLPIFAKFSINENITKNNPQVEENLSTI 355 >gi|85375016|ref|YP_459078.1| hypothetical protein ELI_10945 [Erythrobacter litoralis HTCC2594] gi|84788099|gb|ABC64281.1| hypothetical protein ELI_10945 [Erythrobacter litoralis HTCC2594] Length = 333 Score = 39.0 bits (89), Expect = 0.82, Method: Composition-based stats. Identities = 11/79 (13%), Positives = 22/79 (27%), Gaps = 9/79 (11%) Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 F + ++ SW+ G +DHI + + + + Sbjct: 256 PWSKTTEQFREMGNYGDPRAGRGTYPT--FPSWAGKFGWPLDHIFVKGGL--HVRNFAVL 311 Query: 243 TKPRGWTKPSDHTPVIVSL 261 SDH P+ + Sbjct: 312 DDV-----GSDHRPLAADI 325 >gi|319788340|ref|YP_004147815.1| endonuclease/exonuclease/phosphatase [Pseudoxanthomonas suwonensis 11-1] gi|317466852|gb|ADV28584.1| Endonuclease/exonuclease/phosphatase [Pseudoxanthomonas suwonensis 11-1] Length = 276 Score = 39.0 bits (89), Expect = 0.83, Method: Composition-based stats. Identities = 13/96 (13%), Positives = 28/96 (29%), Gaps = 14/96 (14%) Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 +A + + + +F + IDHI++S Sbjct: 190 HPNAVLMGDFNCLPDVPEMELLYRTTSLRPPECVVPTFPSWKPQ-------RAIDHILVS 242 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 + A+ SDH + + +++PE Sbjct: 243 GDL--RCAGAKALPAA-----FSDHLALAMDIEVPE 271 >gi|298204337|gb|ADI61817.1| endonuclease-reverse transcriptase [Bombyx mori] Length = 989 Score = 39.0 bits (89), Expect = 0.83, Method: Composition-based stats. Identities = 35/263 (13%), Positives = 67/263 (25%), Gaps = 26/263 (9%) Query: 6 VATWNVNSIRARIH--NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 +AT+NV ++R L + DI+ L E + + + Sbjct: 49 LATYNVRTLRTDEKIVELEEELSRLRWDIVGLSEVR-REGEDTITLRSGNLLYFREGDHL 107 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 S GV + V + V + T + + +++ H + T Sbjct: 108 SQGGVGFFVHKSLVNNVLKIESVSTRVVYLVLRITKKYSLKIIQVYAPTSAHSDDEVETM 167 Query: 124 YD---DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 Y+ + K + G+ + P N E Sbjct: 168 YEDISRAMHSFKTHITIVMGDFNARLGKRSEGELRVGPFGFGNRNHRGNLLAGFMEKEEL 227 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + KN+ ID IM + + + Sbjct: 228 FMMNSFFQKRNHRKWTWMSP------------NGAIKNE---IDFIMSTKR--QIFNDVS 270 Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263 + SDH V +L++ Sbjct: 271 VINMV---KTGSDHRMVRGTLNL 290 >gi|146171520|ref|XP_001017972.2| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena thermophila] gi|146145002|gb|EAR97727.2| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena thermophila SB210] Length = 892 Score = 39.0 bits (89), Expect = 0.83, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 9/47 (19%) Query: 1 MSVVTV--ATWNVNSIRA--RIHNLAAWIK---ENNPDIIC--LQET 38 S + V TWNVN + A +I ++ ++ PD++C LQE Sbjct: 538 FSKIKVFVITWNVNGLEAPSQIDQNGSFFAFDPKDTPDVVCVGLQEI 584 >gi|301309757|ref|ZP_07215696.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 20_3] gi|300831331|gb|EFK61962.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. 20_3] Length = 628 Score = 39.0 bits (89), Expect = 0.83, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 22/43 (51%), Gaps = 7/43 (16%) Query: 2 SVVTVATWNV-NSIR-----ARIHNLAAWIKENNPDIICLQET 38 + + + ++N+ N R + +A I++ PD++ +QE Sbjct: 40 NTLRIMSYNIRNG-RGMDEVTDLGRIAEAIRKVAPDVVAVQEV 81 >gi|297699068|ref|XP_002826638.1| PREDICTED: sphingomyelin phosphodiesterase 3-like [Pongo abelii] Length = 630 Score = 39.0 bits (89), Expect = 0.83, Method: Composition-based stats. Identities = 35/269 (13%), Positives = 63/269 (23%), Gaps = 43/269 (15%) Query: 31 DIICLQE-------TKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHL 83 D +CLQE TK + + + Y + G + L+ + Sbjct: 358 DFLCLQEVFDKRAATKL-KEQLHG-YFEYILYDVGVYGCQGCCSFKCLNSGLLFASRYPI 415 Query: 84 PGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLE 143 + L + + + A+ E Sbjct: 416 MDVAYHCYPNKCNDDALASKGALFLKKDSAIRCGQLDLLQDWLADFRKYTSSSSAANPEE 475 Query: 144 LEEPLIFAGDYNI-----------IPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192 L + GD+N Y + + Sbjct: 476 LVAFDVVCGDFNFDNCSSDDKLEQQHSLFTHYRDPCRLGPGEEKPWAIGTLLDTNGLYDE 535 Query: 193 DAIRATH--------DTHHLY----SFWDYYADSWS---KNKGIRIDHIM-----LSPEA 232 D + + Y + K G RID+++ L P+ Sbjct: 536 DVCTPDNLQKVLESEEGRREYLAFPTSKSSGQKGRKELLKGNGRRIDYMLHAEEGLCPDW 595 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + + T+ G T DH PV + L Sbjct: 596 KAEVEEFSFITQLSGLT---DHLPVAMRL 621 >gi|255956321|ref|XP_002568913.1| Pc21g19220 [Penicillium chrysogenum Wisconsin 54-1255] gi|211590624|emb|CAP96819.1| Pc21g19220 [Penicillium chrysogenum Wisconsin 54-1255] Length = 289 Score = 39.0 bits (89), Expect = 0.83, Method: Composition-based stats. Identities = 28/248 (11%), Positives = 68/248 (27%), Gaps = 25/248 (10%) Query: 32 IICLQET----------KT-EDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80 +CLQE + +D + + + + + + + Sbjct: 51 FLCLQEVLHNQLGDILARLNQDAELETPEWEYIG--VGRDDGHEAGEYSPIIYRPAVWEL 108 Query: 81 THLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQ 140 H L ++ + + ++ + T + + RF + Sbjct: 109 LHWETVWLSKTPETPSKSWDAASIRIVTIGVFTHRASRNTVLAMNTHLDDQGSQSRFEAA 168 Query: 141 RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHD 200 R+ +++ ++ + ++ + L + + Sbjct: 169 RIIIDKISEYSQNKFAKLISGTFLAGDFN--SEENQEAYQELTRSLLDAYKQIESSRRYG 226 Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK-----PSDHT 255 H ++ + Y RID++++ P A I G SDH Sbjct: 227 NHITWTGFGY-----EDEPASRIDYVLVRPTGAQGQRLAVIGYAVLGNRFDDGVLSSDHR 281 Query: 256 PVIVSLDI 263 VIV L + Sbjct: 282 AVIVDLTL 289 >gi|281207457|gb|EFA81640.1| ankyrin repeat-containing protein [Polysphondylium pallidum PN500] Length = 1696 Score = 39.0 bits (89), Expect = 0.84, Method: Composition-based stats. Identities = 11/59 (18%), Positives = 25/59 (42%), Gaps = 11/59 (18%) Query: 221 IRIDHIMLSPEAT---SLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQ 276 R+D I ++ + + D SDH P+ V +++ P+ + + T++ Sbjct: 984 RRLDRIYVASTMLGSNPAVATYFHDK--------SDHCPISVDINLSIPKIDESEKTNE 1034 >gi|222629518|gb|EEE61650.1| hypothetical protein OsJ_16098 [Oryza sativa Japonica Group] Length = 393 Score = 39.0 bits (89), Expect = 0.84, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 2/43 (4%) Query: 1 MSVVTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTE 41 MS ++V WNV + A+ + + ++ ++CLQE+K E Sbjct: 1 MSRLSVLVWNVRGLNNPAKRRVVKESVVNSHASVVCLQESKLE 43 >gi|260061623|ref|YP_003194703.1| Endonuclease/exonuclease/phosphatase [Robiginitalea biformata HTCC2501] gi|88785755|gb|EAR16924.1| Endonuclease/exonuclease/phosphatase [Robiginitalea biformata HTCC2501] Length = 370 Score = 39.0 bits (89), Expect = 0.84, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 19/58 (32%), Gaps = 8/58 (13%) Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD-IPEPRKKQQDSTSQN 277 +DHI E L + SDH PV + LD PE Q + Sbjct: 287 WPLDHIFAHREF--RLRDLEVMPDI-----GSDHFPVYIHLDYFPEGAGDQSPEPASE 337 >gi|84686218|ref|ZP_01014113.1| possible Endonuclease/Exonuclease/phosphatase fa [Maritimibacter alkaliphilus HTCC2654] gi|84665745|gb|EAQ12220.1| possible Endonuclease/Exonuclease/phosphatase fa [Rhodobacterales bacterium HTCC2654] Length = 343 Score = 39.0 bits (89), Expect = 0.84, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 12/53 (22%) Query: 223 IDHIMLSPEATSLLHSARIDT-----------KPR-GWTKPSDHTPVIVSLDI 263 +D+IM+SP+ + RI + R SDH PV + +D+ Sbjct: 291 LDYIMVSPDLLASKPDWRIWHPFDDPVCYRTIELREALLTASDHFPVSIDIDL 343 >gi|323307425|gb|EGA60699.1| Inp52p [Saccharomyces cerevisiae FostersO] Length = 1103 Score = 39.0 bits (89), Expect = 0.85, Method: Composition-based stats. Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 7/37 (18%) Query: 8 TWNVNSIRARIHNLAAWI----KENNPDII--CLQET 38 T+NVN +R +L+ W+ + PD++ LQE Sbjct: 597 TFNVNG-NSRRADLSEWLFPIGDKFKPDVVVLGLQEV 632 >gi|320037679|gb|EFW19616.1| endonuclease/exonuclease/phosphatase [Coccidioides posadasii str. Silveira] Length = 290 Score = 39.0 bits (89), Expect = 0.85, Method: Composition-based stats. Identities = 33/262 (12%), Positives = 67/262 (25%), Gaps = 27/262 (10%) Query: 17 RIHNLAAWI---KENNPD-IICLQET-KTEDKNFPFETLQSLNYHIETCGQKSYNGVAIL 71 R H + + +N + ICLQE + + + + L LN H +T Sbjct: 33 RKHLVLNELIFHTRHNAESFICLQEVLRVQLE----DVLSGLNSHGDTWAYIGVGRDDGK 88 Query: 72 SKYQPIEIVTHLPGD--------DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 + I L + + + ++ + T Sbjct: 89 QAGEYSPIFYRPDVWKLETWETVWLSETPEVPSKGWDAASIRIVTVGVFRHRASRKTVLA 148 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + R+ S +L L + + E + Sbjct: 149 MTTHLDDQGSGSRYESAKLILRTIDGYLHKFKDRISGLFLAGDFNSEVNQEAYQVFIDPT 208 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP----EATSLLHSA 239 L + + Y+ + Y + + RID+I++ P + Sbjct: 209 SPLVDARDQIKPDERYGNEITYTGFGYEGERET-----RIDYILVGPKTEQGFPWTVKQY 263 Query: 240 RIDTKPRGWTKP-SDHTPVIVS 260 + SDH V+ Sbjct: 264 GVLPNKFDDGVFSSDHRAVVAD 285 >gi|259149255|emb|CAY82497.1| Inp52p [Saccharomyces cerevisiae EC1118] Length = 1183 Score = 39.0 bits (89), Expect = 0.85, Method: Composition-based stats. Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 7/37 (18%) Query: 8 TWNVNSIRARIHNLAAWI----KENNPDII--CLQET 38 T+NVN +R +L+ W+ + PD++ LQE Sbjct: 597 TFNVNG-NSRRADLSEWLFPIGDKFKPDVVVLGLQEV 632 >gi|151944429|gb|EDN62707.1| inositol polyphosphate 5-phosphatase [Saccharomyces cerevisiae YJM789] Length = 1183 Score = 39.0 bits (89), Expect = 0.85, Method: Composition-based stats. Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 7/37 (18%) Query: 8 TWNVNSIRARIHNLAAWI----KENNPDII--CLQET 38 T+NVN +R +L+ W+ + PD++ LQE Sbjct: 597 TFNVNG-NSRRADLSEWLFPIGDKFKPDVVVLGLQEV 632 >gi|30682419|ref|NP_563894.2| endonuclease/exonuclease/phosphatase family protein [Arabidopsis thaliana] gi|4835775|gb|AAD30241.1|AC007296_2 EST gb|F14156 comes from this gene [Arabidopsis thaliana] gi|22135816|gb|AAM91094.1| At1g11800/F25C20_3 [Arabidopsis thaliana] gi|23308397|gb|AAN18168.1| At1g11800/F25C20_3 [Arabidopsis thaliana] gi|332190667|gb|AEE28788.1| endonuclease/exonuclease/phosphatase-like protein [Arabidopsis thaliana] Length = 441 Score = 39.0 bits (89), Expect = 0.85, Method: Composition-based stats. Identities = 38/288 (13%), Positives = 80/288 (27%), Gaps = 52/288 (18%) Query: 4 VTVATWNVNS-----IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 + + ++NV + R+ + I+ ++P +IC QE + ++ + N+ Sbjct: 173 LKILSYNVWFREDLELNLRMRAIGHLIQLHSPHLICFQEV--TPEI--YDIFRKSNWWKA 228 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 S + Y + + +I + L I + +P P Sbjct: 229 YSCSVSVDVAVSRGYYCMLLSKLGVKSFSSKSFGN------SIMGRELSIAEVEVPGRKP 282 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + + S + + N Sbjct: 283 L-----------VFATSHLESPCPGPPKWDQMFSRERVEQAKEAIEILRPNANVIFGGDM 331 Query: 179 VRQSF---QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI--RIDHIM------ 227 + + D +++ S N+ + R+D I+ Sbjct: 332 NWCDKLDGKFPLPDKWVDVWEVLKPGDLGFTYDTKANPMLSGNRALQKRLDRILCRLDDY 391 Query: 228 -------LSPEATSLLHSARIDTKPRGWTK-------PSDHTPVIVSL 261 + EA L + + K RG K PSDH ++V+L Sbjct: 392 KLGGIEMVGKEAIPGLSYVK-EKKVRGDIKKLELPVLPSDHFGLLVTL 438 >gi|321453050|gb|EFX64329.1| hypothetical protein DAPPUDRAFT_118284 [Daphnia pulex] Length = 572 Score = 39.0 bits (89), Expect = 0.86, Method: Composition-based stats. Identities = 11/38 (28%), Positives = 18/38 (47%), Gaps = 2/38 (5%) Query: 3 VVTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQET 38 ++ V + N+ I + L + N D+ICLQE Sbjct: 205 IMKVTSINIARISTPECLQLLLNYCVSNEFDVICLQEV 242 >gi|319643580|ref|ZP_07998200.1| glycosyl hydrolase family 109 protein 5 [Bacteroides sp. 3_1_40A] gi|317384749|gb|EFV65708.1| glycosyl hydrolase family 109 protein 5 [Bacteroides sp. 3_1_40A] Length = 502 Score = 39.0 bits (89), Expect = 0.86, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 31/104 (29%), Gaps = 9/104 (8%) Query: 151 AGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWD- 209 D I + +I EN E+ Q + H+L FWD Sbjct: 159 CWDL-INLSEKTRKHCMILENCCYDWFEMNTLNMAQQGVFGEVIRAQGAYIHNLSPFWDH 217 Query: 210 YYADSWSKNKGIRIDH-------IMLSPEATSLLHSARIDTKPR 246 Y+ + G R+D+ + + + + I R Sbjct: 218 YWKNGKEDKLGWRLDYNMKHRGDVYATHGLGPVAQALDIHRGDR 261 >gi|271498824|ref|YP_003331849.1| endonuclease/exonuclease/phosphatase [Dickeya dadantii Ech586] gi|270342379|gb|ACZ75144.1| Endonuclease/exonuclease/phosphatase [Dickeya dadantii Ech586] Length = 380 Score = 39.0 bits (89), Expect = 0.86, Method: Composition-based stats. Identities = 36/268 (13%), Positives = 74/268 (27%), Gaps = 39/268 (14%) Query: 25 IKENNPDIICLQETK----TED--KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIE 78 I DI+C E + D + + + I++ VA L++++ + Sbjct: 122 INALKADILCAAEVENMAVLHDFNQQILADQAFAQYVMIDSPNDPRGIDVACLTRHRITQ 181 Query: 79 IVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFA 138 + TH+ F + I + + + + R A Sbjct: 182 LRTHIFDTSASFSPLFSRDCLE-----VTIDIGLTQPVHVLCNHFKSQNGRNDEERERSA 236 Query: 139 SQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT 198 +R E + + Q + + E+ A + F D Sbjct: 237 RRRHAQAERVADIVRGYNLQQEYVVVMGDLNEDSANPWHSLAPLFSVADLHPVVDPAL-- 294 Query: 199 HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT--------------- 243 Y++ Y++ S + ++D+I +S I+ Sbjct: 295 -PETARYTY--YFSGGKSGERLNQLDYIFISTPLHQAKVDWGIERRGIYNIDKIAAKEGA 351 Query: 244 -------KPRGWTKP-SDHTPVIVSLDI 263 W SDH + V D+ Sbjct: 352 DPVTPFPTVTSWDTAASDHAAIWVECDL 379 >gi|222616232|gb|EEE52364.1| hypothetical protein OsJ_34428 [Oryza sativa Japonica Group] Length = 1102 Score = 39.0 bits (89), Expect = 0.86, Method: Composition-based stats. Identities = 18/130 (13%), Positives = 41/130 (31%), Gaps = 13/130 (10%) Query: 157 IPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS 216 + ++ + + + Q F+ R +++ D Sbjct: 548 RHNMWSMLRSLRNSSNLPWLVIGDFNEALWQFEHFSSHPRGEPQMGTPFTY-DNKRQGR- 605 Query: 217 KNKGIRIDHIMLSPEATSLLHSARI--DTKPRGWTKPSDHTPVIVSL--DIPEPRKKQ-- 270 N +R+D + +A + PR SDH P+ + L ++ +P +K+ Sbjct: 606 NNVRVRLDRAIADNAWRDTFPNATLAHLASPR-----SDHCPISLQLSQEMKQPARKKIL 660 Query: 271 QDSTSQNMKP 280 +P Sbjct: 661 HYEICWEREP 670 >gi|167619815|ref|ZP_02388446.1| endonuclease/exonuclease/phosphatase family superfamily protein [Burkholderia thailandensis Bt4] Length = 160 Score = 39.0 bits (89), Expect = 0.86, Method: Composition-based stats. Identities = 10/48 (20%), Positives = 18/48 (37%), Gaps = 20/48 (41%) Query: 4 VTVATWNV------NS-------IRARIHNLAAWIKENNPDIICLQET 38 + + +WN+ N I A L + D++C+QE Sbjct: 1 MRLISWNIQWGRDANGTVDLARTIDAA-RGLGDF------DVLCMQEV 41 >gi|167581699|ref|ZP_02374573.1| endonuclease/exonuclease/phosphatase family superfamily protein [Burkholderia thailandensis TXDOH] Length = 101 Score = 39.0 bits (89), Expect = 0.86, Method: Composition-based stats. Identities = 10/48 (20%), Positives = 18/48 (37%), Gaps = 20/48 (41%) Query: 4 VTVATWNV------NS-------IRARIHNLAAWIKENNPDIICLQET 38 + + +WN+ N I A L + D++C+QE Sbjct: 1 MRLISWNIQWGRDANGTVDLARTIDAA-RGLGDF------DVLCMQEV 41 >gi|28198568|ref|NP_778882.1| hypothetical protein PD0660 [Xylella fastidiosa Temecula1] gi|28056652|gb|AAO28531.1| conserved hypothetical protein [Xylella fastidiosa Temecula1] gi|307579699|gb|ADN63668.1| endonuclease/exonuclease/phosphatase [Xylella fastidiosa subsp. fastidiosa GB514] Length = 246 Score = 39.0 bits (89), Expect = 0.86, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 18/49 (36%), Gaps = 11/49 (22%) Query: 221 IR----IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 R IDHI++S I SDH V + L IP+ Sbjct: 201 WRPERAIDHILVSEGF-------YICKTEAVPAAFSDHLAVSMDLVIPQ 242 >gi|71897607|ref|ZP_00679852.1| Endonuclease/exonuclease/phosphatase [Xylella fastidiosa Ann-1] gi|182681249|ref|YP_001829409.1| endonuclease/exonuclease/phosphatase [Xylella fastidiosa M23] gi|71732510|gb|EAO34563.1| Endonuclease/exonuclease/phosphatase [Xylella fastidiosa Ann-1] gi|182631359|gb|ACB92135.1| Endonuclease/exonuclease/phosphatase [Xylella fastidiosa M23] Length = 256 Score = 39.0 bits (89), Expect = 0.86, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 18/49 (36%), Gaps = 11/49 (22%) Query: 221 IR----IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 R IDHI++S I SDH V + L IP+ Sbjct: 211 WRPERAIDHILVSEGF-------YICKTEAVPAAFSDHLAVSMDLVIPQ 252 >gi|77553854|gb|ABA96650.1| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 1100 Score = 38.6 bits (88), Expect = 0.87, Method: Composition-based stats. Identities = 23/151 (15%), Positives = 49/151 (32%), Gaps = 8/151 (5%) Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 I +D+ + R + E ++ I P + + N+A Sbjct: 194 YTNRHIDVLVKEDRSAMQWRCTFVYGEPKAHERHNMWTLLRRIKPNSTAPWCLMGDFNEA 253 Query: 174 CFTLEVR----QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIML 228 + E + +++ + + D + + W Y N +R+D + Sbjct: 254 MWQFEHFSEHKRKEKQMLDFREILSHCDVFDLGFIGTPWTYDNKRKGGYNVRVRLDRAVA 313 Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 S + L A++ SDH P++V Sbjct: 314 SQSWSVLYPQAQVRHLVSSR---SDHCPILV 341 >gi|284034341|ref|YP_003384272.1| endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836] gi|283813634|gb|ADB35473.1| Endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836] Length = 272 Score = 38.6 bits (88), Expect = 0.88, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 7/42 (16%) Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 RID+++ S SA + T SDH PV+ + + Sbjct: 237 RIDYLLHSAALRP--TSASV-----PATLASDHLPVVATFTL 271 >gi|150004584|ref|YP_001299328.1| putative oxidoreductase [Bacteroides vulgatus ATCC 8482] gi|205749538|sp|A6L1Z2|G1095_BACV8 RecName: Full=Glycosyl hydrolase family 109 protein 5; Flags: Precursor gi|149933008|gb|ABR39706.1| putative oxidoreductase [Bacteroides vulgatus ATCC 8482] Length = 520 Score = 38.6 bits (88), Expect = 0.88, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 31/104 (29%), Gaps = 9/104 (8%) Query: 151 AGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWD- 209 D I + +I EN E+ Q + H+L FWD Sbjct: 177 CWDL-INLSEKTRKHCMILENCCYDWFEMNTLNMAQQGVFGEVIRAQGAYIHNLSPFWDH 235 Query: 210 YYADSWSKNKGIRIDH-------IMLSPEATSLLHSARIDTKPR 246 Y+ + G R+D+ + + + + I R Sbjct: 236 YWKNGKEDKLGWRLDYNMKHRGDVYATHGLGPVAQALDIHRGDR 279 >gi|125718607|ref|YP_001035740.1| hypothetical protein SSA_1808 [Streptococcus sanguinis SK36] gi|125498524|gb|ABN45190.1| Conserved hypothetical protein [Streptococcus sanguinis SK36] Length = 271 Score = 38.6 bits (88), Expect = 0.88, Method: Composition-based stats. Identities = 27/254 (10%), Positives = 64/254 (25%), Gaps = 29/254 (11%) Query: 18 IHNLAAWIKENNPDIICLQETK--TEDKNFPFETLQSLNYHIETCGQKSYNGVAILS--- 72 ++ LA I + D+ICLQE TE + Y + + L Sbjct: 21 LNQLAERILQEKYDVICLQEVNQLTESEQVVQAPF----YQAVEGAIEIHQDHFALCLVE 76 Query: 73 ------KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDD 126 + G D+ + I + + + + + + P + Sbjct: 77 KLADAGLDYHWSWAYNHIGFDIYNEGVAILSRKPLTPREVLVSEVNDPRDYHTRKVLLAE 136 Query: 127 KISWIK------RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + L + + + E + + + + Sbjct: 137 TEVEGQLLTIASCHLSWWDKGFQGEWAKLEEKLLKAESSLVLMGDFNNPVGQQGYQTILA 196 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + + + + WD ++ID++ S + + Sbjct: 197 SPLKLQDSHAVAREAIGEATVEGIIAGWD------DNKHALKIDYVFTSQGMD--VERSA 248 Query: 241 IDTKPRGWTKPSDH 254 + + SDH Sbjct: 249 VVFDGKETPVVSDH 262 >gi|284033955|ref|YP_003383886.1| endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836] gi|283813248|gb|ADB35087.1| Endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836] Length = 269 Score = 38.6 bits (88), Expect = 0.89, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 18/43 (41%), Gaps = 7/43 (16%) Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 RID+++ S + + I DH PV+ + ++ Sbjct: 234 RRIDYVLHSTDFRAKSARTPITHAA-------DHLPVVATFEL 269 >gi|71894913|ref|NP_001026376.1| protein angel homolog 1 [Gallus gallus] gi|53133676|emb|CAG32167.1| hypothetical protein RCJMB04_19e20 [Gallus gallus] Length = 662 Score = 38.6 bits (88), Expect = 0.89, Method: Composition-based stats. Identities = 11/64 (17%), Positives = 24/64 (37%), Gaps = 7/64 (10%) Query: 17 RIHNLAAWIKENNPDIICLQETKTED----KNFPFETLQSLNYHIETCGQKSYNGVAILS 72 R+ N+ I+ +PD++CLQE ++ + T + + + Sbjct: 283 RLPNILQEIQHWDPDVLCLQEV--QENHYREQLEP-TFVKMGFACFYKRRTGRKTDGCAV 339 Query: 73 KYQP 76 Y+ Sbjct: 340 CYKQ 343 >gi|304404660|ref|ZP_07386321.1| Endonuclease/exonuclease/phosphatase [Paenibacillus curdlanolyticus YK9] gi|304346467|gb|EFM12300.1| Endonuclease/exonuclease/phosphatase [Paenibacillus curdlanolyticus YK9] Length = 313 Score = 38.6 bits (88), Expect = 0.90, Method: Composition-based stats. Identities = 28/253 (11%), Positives = 59/253 (23%), Gaps = 16/253 (6%) Query: 17 RIHNLAAWIKENNPDIICLQETKTE-DKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75 I + A I+ PD++ L E ++ + L L H + Sbjct: 63 AIAEIVARIRALAPDVVGLCEVFANGERKRIRDALSDLYPHFREGPDEGDLESDGGLLLL 122 Query: 76 PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135 + + +R+ P Y + Sbjct: 123 SRHPLLAADAMIFRACDGWDCFANKG-VIHIRVQPASWP---IPLDIFYSHMQNIETDNG 178 Query: 136 RFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAI 195 + + I + ++ + + D Sbjct: 179 VGTLYAQLTTMNNFIVTRRDPAGSQIIMGDLNIPGENQQHYAQLYDRLRLVDCWFLADNQ 238 Query: 196 RATHD----THHLYSFWDYYADSWSKNKGIRIDHIMLSP--EATSLLHSARIDTKPRGWT 249 + ++ Y+ D S N R+D++++ +L + Sbjct: 239 ATSGPTLVIENNFYANPDDRPSS---NH--RLDYVLMRGGIRLVPILADIEVLKFQHNGR 293 Query: 250 KPSDHTPVIVSLD 262 SDH V S D Sbjct: 294 FISDHFGVRASFD 306 >gi|237723968|ref|ZP_04554449.1| glycosyl hydrolase family 109 protein 5 [Bacteroides sp. D4] gi|229437632|gb|EEO47709.1| glycosyl hydrolase family 109 protein 5 [Bacteroides dorei 5_1_36/D4] Length = 502 Score = 38.6 bits (88), Expect = 0.90, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 31/104 (29%), Gaps = 9/104 (8%) Query: 151 AGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWD- 209 D I + +I EN E+ Q + H+L FWD Sbjct: 159 CWDL-INLSEKTRKHCMILENCCYDWFEMNTLNMAQQGVFGEIIRAQGAYIHNLSPFWDH 217 Query: 210 YYADSWSKNKGIRIDH-------IMLSPEATSLLHSARIDTKPR 246 Y+ + G R+D+ + + + + I R Sbjct: 218 YWKNGKEDKLGWRLDYNMKHRGDVYATHGLGPVAQALDIHRGDR 261 >gi|212693871|ref|ZP_03301999.1| hypothetical protein BACDOR_03393 [Bacteroides dorei DSM 17855] gi|237708495|ref|ZP_04538976.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|212663403|gb|EEB23977.1| hypothetical protein BACDOR_03393 [Bacteroides dorei DSM 17855] gi|229457424|gb|EEO63145.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] Length = 503 Score = 38.6 bits (88), Expect = 0.90, Method: Composition-based stats. Identities = 18/104 (17%), Positives = 31/104 (29%), Gaps = 9/104 (8%) Query: 151 AGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWD- 209 D I + +I EN E+ Q + H+L FWD Sbjct: 159 CWDL-INLSEKTRKHCMILENCCYDWFEMNTLNMAQQGVFGEIIRAQGAYIHNLSPFWDH 217 Query: 210 YYADSWSKNKGIRIDH-------IMLSPEATSLLHSARIDTKPR 246 Y+ + G R+D+ + + + + I R Sbjct: 218 YWKNGKEDKLGWRLDYNMKHRGDVYATHGLGPVAQALDIHRGDR 261 >gi|308186127|ref|YP_003930258.1| hypothetical protein Pvag_0607 [Pantoea vagans C9-1] gi|308056637|gb|ADO08809.1| Uncharacterized protein ybhP [Pantoea vagans C9-1] Length = 253 Score = 38.6 bits (88), Expect = 0.90, Method: Composition-based stats. Identities = 31/260 (11%), Positives = 56/260 (21%), Gaps = 44/260 (16%) Query: 15 RARIHNLAAWIKENNPDIICLQE---TKTEDKNFPFETLQSLNYHIETCGQKSYNGVAIL 71 R + L ++ + D++ LQE T E +S +Y +N A Sbjct: 27 RFILPELREAVRATSADVVFLQEVMGTHAIHSLNHEEWPESPHYEFLADTM--WNDFAYG 84 Query: 72 SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ----TLRIGNLYLPHGNPITSTKYDDK 127 E + ++ L + Sbjct: 85 RNAVYPEGHHGNAVLSRFPITDYENRDISVAGSENRGMLHCQIALPEPHGTLHVICVHLG 144 Query: 128 ISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQ 187 + R + + A EV Sbjct: 145 LKEAHRHAQMKKICEMVNSLPPDAPVVVAGDFNDWQRRANAILKQGAGLKEVFSMKTGRP 204 Query: 188 NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK--- 244 F +R+D I + +A + Sbjct: 205 ARTFPARFPL-----------------------LRLDRIYV--------RNATVSHPWAL 233 Query: 245 PRG-WTKPSDHTPVIVSLDI 263 PR W+ SDH P+ V + + Sbjct: 234 PRKPWSHLSDHAPLAVEIHL 253 >gi|294674138|ref|YP_003574754.1| endonuclease/exonuclease/phosphatase family protein [Prevotella ruminicola 23] gi|294472322|gb|ADE81711.1| endonuclease/exonuclease/phosphatase family protein [Prevotella ruminicola 23] Length = 311 Score = 38.6 bits (88), Expect = 0.90, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 21/60 (35%), Gaps = 21/60 (35%) Query: 223 IDHIMLSPEATSLLHSARIDT---------------------KPRGWTKPSDHTPVIVSL 261 IDHI+ S + + +A I PR SDH P++V L Sbjct: 250 IDHILGSSSINNKVDTAFIHAPKFLLEEDARYGGYRPRRTYIGPRYQGGFSDHLPLVVRL 309 >gi|126735134|ref|ZP_01750880.1| Endonuclease/exonuclease/phosphatase [Roseobacter sp. CCS2] gi|126715689|gb|EBA12554.1| Endonuclease/exonuclease/phosphatase [Roseobacter sp. CCS2] Length = 332 Score = 38.6 bits (88), Expect = 0.90, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 21/53 (39%), Gaps = 12/53 (22%) Query: 223 IDHIMLSPEATSLLH-----------SARIDTKPR-GWTKPSDHTPVIVSLDI 263 +D++M+S + D R G SDH PV++ +D+ Sbjct: 280 LDYVMVSQGLRQKAPIWQIWHPFDHPACYADVVLRDGLLAASDHFPVVLDIDL 332 >gi|7327281|gb|AAB26437.2| reverse transcriptase homolog [Chironomus thummi] Length = 883 Score = 38.6 bits (88), Expect = 0.90, Method: Composition-based stats. Identities = 8/30 (26%), Positives = 16/30 (53%) Query: 9 WNVNSIRARIHNLAAWIKENNPDIICLQET 38 WN N + ++ ++ + N D+ C+ ET Sbjct: 13 WNANGLTDKMLAFLDYLSKQNVDVACISET 42 >gi|319759037|gb|ADV70979.1| DNA nuclease [Streptococcus suis JS14] Length = 1039 Score = 38.6 bits (88), Expect = 0.91, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 41/93 (44%), Gaps = 18/93 (19%) Query: 192 TDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL-------LHSARIDTK 244 + + HD +S++ Y ++ S +D++++S ++SA ++ Sbjct: 867 MANLVSRHDASDRFSYF-YNGNNQS------LDNMLVSTNLLERYAFDMVHVNSAFMEEH 919 Query: 245 PRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQN 277 R SDH P++V LD+ + ++ Q S Sbjct: 920 GR----ASDHDPLLVQLDVTKAQEPTQPEPSDK 948 >gi|281349076|gb|EFB24660.1| hypothetical protein PANDA_011327 [Ailuropoda melanoleuca] Length = 96 Score = 38.6 bits (88), Expect = 0.91, Method: Composition-based stats. Identities = 18/79 (22%), Positives = 25/79 (31%), Gaps = 10/79 (12%) Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 E L M T R H Y+F+ ++S RIDHI+ + + Sbjct: 3 NKETLSLNDTLDQMDLTHIYRTLHPKTTEYTFFSSVHGTFS-----RIDHILGHKTSLNK 57 Query: 236 LHSARIDTKPRGWTKPSDH 254 I SDH Sbjct: 58 FRKIEIIPCI-----FSDH 71 >gi|281341662|gb|EFB17246.1| hypothetical protein PANDA_006643 [Ailuropoda melanoleuca] Length = 119 Score = 38.6 bits (88), Expect = 0.91, Method: Composition-based stats. Identities = 18/67 (26%), Positives = 24/67 (35%), Gaps = 10/67 (14%) Query: 188 NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRG 247 M TD RA H Y+F+ ++S RIDHI+ A + Sbjct: 30 QMDLTDIFRAFHPKAAEYTFFSSAHGTFS-----RIDHILGHKSALNKYKKIETIPCI-- 82 Query: 248 WTKPSDH 254 SDH Sbjct: 83 ---FSDH 86 >gi|253752620|ref|YP_003025761.1| surface-anchored DNA nuclease [Streptococcus suis SC84] gi|253754446|ref|YP_003027587.1| surface-anchored DNA nuclease [Streptococcus suis P1/7] gi|251816909|emb|CAZ52558.1| surface-anchored DNA nuclease [Streptococcus suis SC84] gi|251820692|emb|CAR47454.1| surface-anchored DNA nuclease [Streptococcus suis P1/7] Length = 1039 Score = 38.6 bits (88), Expect = 0.91, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 41/93 (44%), Gaps = 18/93 (19%) Query: 192 TDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL-------LHSARIDTK 244 + + HD +S++ Y ++ S +D++++S ++SA ++ Sbjct: 867 MANLVSRHDASDRFSYF-YNGNNQS------LDNMLVSTNLLERYAFDMVHVNSAFMEEH 919 Query: 245 PRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQN 277 R SDH P++V LD+ + ++ Q S Sbjct: 920 GR----ASDHDPLLVQLDVTKAQEPTQPEPSDK 948 >gi|255594310|ref|XP_002536065.1| General secretion pathway protein E, putative [Ricinus communis] gi|223521009|gb|EEF26317.1| General secretion pathway protein E, putative [Ricinus communis] Length = 279 Score = 38.6 bits (88), Expect = 0.91, Method: Composition-based stats. Identities = 17/93 (18%), Positives = 35/93 (37%), Gaps = 16/93 (17%) Query: 2 SVVTVATWN-------VNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54 S++ + N +N IRA I +PDII + E + ++ ++ Sbjct: 62 SLMRQTSVNAANKVDFINGIRA--------ILRQDPDIILIGEVR-DESTAAMAVRAAMT 112 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDD 87 H+ + + A S+ Q + + H+ Sbjct: 113 GHLVMTTLHTNSATAAFSRLQDLGVSPHMMAGC 145 >gi|147833918|emb|CAN72699.1| hypothetical protein VITISV_011568 [Vitis vinifera] Length = 1059 Score = 38.6 bits (88), Expect = 0.91, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 2/44 (4%) Query: 1 MSVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTED 42 + + + + NV + A IK N D++ LQETK ++ Sbjct: 524 LMKLRILSLNVRGANDSDKRKVIKASIKAQNVDLVYLQETKMQE 567 >gi|146319622|ref|YP_001199334.1| DNA nuclease [Streptococcus suis 05ZYH33] gi|146321820|ref|YP_001201531.1| DNA nuclease [Streptococcus suis 98HAH33] gi|145690428|gb|ABP90934.1| DNA nuclease [Streptococcus suis 05ZYH33] gi|145692626|gb|ABP93131.1| DNA nuclease [Streptococcus suis 98HAH33] gi|292559239|gb|ADE32240.1| DNA nuclease [Streptococcus suis GZ1] Length = 1059 Score = 38.6 bits (88), Expect = 0.91, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 41/93 (44%), Gaps = 18/93 (19%) Query: 192 TDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL-------LHSARIDTK 244 + + HD +S++ Y ++ S +D++++S ++SA ++ Sbjct: 887 MANLVSRHDASDRFSYF-YNGNNQS------LDNMLVSTNLLERYAFDMVHVNSAFMEEH 939 Query: 245 PRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQN 277 R SDH P++V LD+ + ++ Q S Sbjct: 940 GR----ASDHDPLLVQLDVTKAQEPTQPEPSDK 968 >gi|21553771|gb|AAM62864.1| unknown [Arabidopsis thaliana] Length = 426 Score = 38.6 bits (88), Expect = 0.91, Method: Composition-based stats. Identities = 38/288 (13%), Positives = 80/288 (27%), Gaps = 52/288 (18%) Query: 4 VTVATWNVNS-----IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 + + ++NV + R+ + I+ ++P +IC QE + ++ + N+ Sbjct: 158 LKILSYNVWFREDLELNLRMRAIGHLIQLHSPHLICFQEV--TPEI--YDIFRKSNWWKA 213 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 S + Y + + +I + L I + +P P Sbjct: 214 YSCSVSVDVAVSRGYYCMLLSKLGVKSFSSKSFGN------SIMGRELSIAEVEVPGRKP 267 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + + S + + N Sbjct: 268 L-----------VFATSHLESPCPGPPKWDQMFSRERVEQAKEAIEILRPNANVIFGGDM 316 Query: 179 VRQSF---QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI--RIDHIM------ 227 + + D +++ S N+ + R+D I+ Sbjct: 317 NWCDKLDGKFPLPDKWVDVWEVLKPGDLGFTYDTKANPMLSGNRALQKRLDRILCRLDDY 376 Query: 228 -------LSPEATSLLHSARIDTKPRGWTK-------PSDHTPVIVSL 261 + EA L + + K RG K PSDH ++V+L Sbjct: 377 KLGGIEMVGKEAIPGLSYVK-EKKVRGDIKKLELPVLPSDHFGLLVTL 423 >gi|32472920|ref|NP_865914.1| hypothetical protein RB4127 [Rhodopirellula baltica SH 1] gi|32444157|emb|CAD73600.1| probable secreted protein [Rhodopirellula baltica SH 1] Length = 279 Score = 38.6 bits (88), Expect = 0.92, Method: Composition-based stats. Identities = 11/46 (23%), Positives = 20/46 (43%), Gaps = 4/46 (8%) Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 N +ID I+ P + L ++ + SDH P+ L++ Sbjct: 236 NPRRQIDFILFRPSNSWKLIEVKVLDEA----VASDHRPIFAVLEL 277 >gi|332040139|gb|EGI76521.1| hypothetical protein HGR_10877 [Hylemonella gracilis ATCC 19624] Length = 475 Score = 38.6 bits (88), Expect = 0.93, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 20/55 (36%), Gaps = 15/55 (27%) Query: 223 IDHIMLSPEATSLLHS-ARI---DTKPRGWTK-----------PSDHTPVIVSLD 262 IDHI++S L + + R PSDH P V+LD Sbjct: 420 IDHILVSAALAQRLKKTSFVMSRYNYRRIGENTPMVVTPQDAVPSDHCPHFVALD 474 >gi|221134816|ref|ZP_03561119.1| endonuclease/exonuclease/phosphatase [Glaciecola sp. HTCC2999] Length = 321 Score = 38.6 bits (88), Expect = 0.93, Method: Composition-based stats. Identities = 31/282 (10%), Positives = 72/282 (25%), Gaps = 31/282 (10%) Query: 2 SVVTVATWNV-------N-SIRAR----IHNLAAWIKENNPDIICLQETKTEDKNFPFET 49 S +TVATWNV N + R I+ + ++ + D+ LQE + Sbjct: 49 SQLTVATWNVEHLAYPINTGCKPRTESDINAMREYVNNVDADVFALQEV--ASEQAVRLL 106 Query: 50 LQSLNYHI------ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 + + + ++ + ++ + V + + + Sbjct: 107 FPTDTWQVLMSPRPDSETYECRGSGRESTQQKIAYAVKNGININSVKGLSELGLNNPGLR 166 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 L + + + + + + D Sbjct: 167 YGLELTIQSELGAIKLLNVHMKSGCFVDNYSRSDRESCQTFAQQAPILDAWVETQESEDI 226 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223 ++ + + + ++L + T L YY I Sbjct: 227 QYVLLGDFNHRLSAPYNHLTRQLMTNSDGSESTLYNTTGQLIGCHPYYPAP--------I 278 Query: 224 DHIML---SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 D + + S + A SDH V + ++ Sbjct: 279 DLVFVGGMSDNKYDYTYQAHTFNNMAPKAMLSDHCAVSLQIE 320 >gi|78048060|ref|YP_364235.1| endonuclease/exonuclease/phosphatase family protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325927483|ref|ZP_08188725.1| metal-dependent hydrolase [Xanthomonas perforans 91-118] gi|78036490|emb|CAJ24181.1| endonuclease/exonuclease/phosphatase family protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|325542146|gb|EGD13646.1| metal-dependent hydrolase [Xanthomonas perforans 91-118] Length = 298 Score = 38.6 bits (88), Expect = 0.94, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 7/63 (11%) Query: 4 VTVATWNVNSIR----ARIHNLAAWIKENNPDIICLQET---KTEDKNFPFETLQSLNYH 56 +T+ T N++ R AR +A +K PD+I LQE + +N + L Y Sbjct: 43 MTLVTLNLHHDREDWPARRAYIARELKRLAPDVIALQEVIERRGSVENQAAWLARKLGYD 102 Query: 57 IET 59 Sbjct: 103 YTF 105 >gi|301095832|ref|XP_002897015.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262108444|gb|EEY66496.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 490 Score = 38.6 bits (88), Expect = 0.94, Method: Composition-based stats. Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 7/39 (17%) Query: 6 VATWNVNSIRAR-----IHNLAAWIKENNPDIICLQETK 39 VA+WN+ +I R + +A +KE DI+ LQE + Sbjct: 193 VASWNIRNISRRKEIFLLERIADILKE--FDIVALQEVR 229 >gi|126342340|ref|XP_001373660.1| PREDICTED: similar to ocrl1 [Monodelphis domestica] Length = 864 Score = 38.6 bits (88), Expect = 0.94, Method: Composition-based stats. Identities = 49/292 (16%), Positives = 88/292 (30%), Gaps = 50/292 (17%) Query: 6 VATWNVNSIRARIHNLAAWI--KENNPDIICL--QETKTEDKNF-------PFETL---- 50 + TWNVN ++ L W+ + PDI CL QE + F E L Sbjct: 209 IGTWNVNG-QSPDSALEPWLNCDTDPPDIYCLGFQELDLSTEAFFYFESTKEQEWLTSVD 267 Query: 51 QSLNYHIETCGQKSYNGVAIL-------------SKYQPIEIVTHLPGDDLDVQARFIEA 97 ++L+Y + + V ++ + T L G + A + Sbjct: 268 RALHYKCKYKKVQLVRLVGMMLLIFAKKDQCKYLHDVVTETVGTGLMGKMGNKGAVAVRF 327 Query: 98 TFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFL---RFASQRLELEEPLIFAGDY 154 F T + + + H D K + + + +I+ GD Sbjct: 328 LFHNTTFCI-VNSHLAAHVEDFERRNQDYKDICSRMTFSVPNQGHLNIMKHDVVIWLGDL 386 Query: 155 NIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY--SF-WDYY 211 N N + + ++ + Q A + + ++ +D Sbjct: 387 NYRLC-MPDANEVKTLINRNELPKLLKLDQLNIQRSHKKAFADFTEGEIRFMPTYKFDPK 445 Query: 212 ADSWSKNKGIRIDHIMLSPEATSLL--HSARIDTKPRGW----TKPSDHTPV 257 D W + R +P + + + R W K SDH PV Sbjct: 446 TDRWDSSGKCR------TPAWCDRILWRGTNV-NQQRYWSHMELKTSDHKPV 490 >gi|326680843|ref|XP_003201639.1| PREDICTED: hypothetical protein LOC100537186 [Danio rerio] Length = 1202 Score = 38.6 bits (88), Expect = 0.95, Method: Composition-based stats. Identities = 31/243 (12%), Positives = 68/243 (27%), Gaps = 14/243 (5%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLP 84 + N DI LQET+ D E + ++ + + + + P Sbjct: 25 LLRLNVDIAALQETRLADSGTLKE--KDYTFYWQGRAPDEPRQHGVAFAVKNNLLSMVEP 82 Query: 85 GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL 144 G + + + T TL + T K+ ++ + + Q + L Sbjct: 83 GRNGTERLLTLRLNTTTGPLTLVSVYAPTLNATLETKDKFYGNLTSVINNIPDKEQLVLL 142 Query: 145 EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL 204 F + + N+ ++ T H + Sbjct: 143 G---DFNARVGANHESWPSCLGKFGIGKMNENGQRLLELCAFHNLCIANSYFQTKPQHKV 199 Query: 205 YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 S+ + W + +D I++ A + + +DH+ V + + Sbjct: 200 -SWRHPRSKHWHQ-----LDLILVRRSAINCVLHV---RSYHSADCDTDHSLVCCKIRLN 250 Query: 265 EPR 267 R Sbjct: 251 PKR 253 >gi|327300110|ref|XP_003234748.1| endonuclease/exonuclease/phosphatase [Trichophyton rubrum CBS 118892] gi|326463642|gb|EGD89095.1| endonuclease/exonuclease/phosphatase [Trichophyton rubrum CBS 118892] Length = 322 Score = 38.6 bits (88), Expect = 0.95, Method: Composition-based stats. Identities = 36/290 (12%), Positives = 81/290 (27%), Gaps = 41/290 (14%) Query: 3 VVTVATWNVN-------------SIRARIHNLAAWIK---ENNPD-IICLQE-TKTEDKN 44 + + T N+ SIRA ++ + NP+ +CLQE + + Sbjct: 39 LFRILTHNIRYATTSPSAGEQPWSIRA--PHIVNELDYHSRLNPESFVCLQEALHNQVTD 96 Query: 45 F-------PFETLQSLNYH-IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIE 96 P Y+ + K + + + + L Sbjct: 97 VLAGLNARPHAQADEWAYYGVGRDDGKQAGEYSPIFYRPAVWTLQERETVWLSETPSVPS 156 Query: 97 ATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI 156 + + + ++ + T + + R S +L L + + Sbjct: 157 KGWDAASIRIVTIGVFNHKASNTTVLAMNTHLDDQGSKSRLESAKLILSLIQKYLAR-HP 215 Query: 157 IPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS 216 + + E + + + + ++ +D Sbjct: 216 EVKGNFLAGDFNSIESQEAYREFTKPGSSIVDTYKKVPAAQHYGDEITFTGFD------G 269 Query: 217 KNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP------SDHTPVIVS 260 K KG RID++M+ P++ S ++ + SDH V+ Sbjct: 270 KTKGSRIDYVMVGPQSASASIPFTVNGYAVVPNRFDNRIYNSDHRAVVAD 319 >gi|305667498|ref|YP_003863785.1| hypothetical protein FB2170_14663 [Maribacter sp. HTCC2170] gi|88709546|gb|EAR01779.1| hypothetical protein FB2170_14663 [Maribacter sp. HTCC2170] Length = 602 Score = 38.6 bits (88), Expect = 0.95, Method: Composition-based stats. Identities = 31/234 (13%), Positives = 57/234 (24%), Gaps = 28/234 (11%) Query: 9 WNV-----------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57 WN+ + +R+ + IKE N D+I +QET + +F L Y+ Sbjct: 376 WNIWHGGIHWSMDKDGWDSRM-RIVEIIKEKNLDVILMQETY-SNGDF---IAAELGYYF 430 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 T Y +T L + TQ + + + N Sbjct: 431 ATTSDWDYKYQGANISVISRYPITELQVSEETEFNNVAVKLKISETQEIWAMSNWYGMSN 490 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGD---YNIIPQPHDCYNPIIWENDAC 174 Y+ + P G+ + D Sbjct: 491 FNKVFDYNKSRFDNSDSIPVFFGGDFNAVPHEDGGENLASEKMLVEGFTDAYRSLYPDVE 550 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228 + + + + + S W S DH ++ Sbjct: 551 KHPGFTHQSDVRIDQLYYKGRGLMNTSTKVISTWPSGFPS---------DHFLI 595 >gi|88854827|ref|ZP_01129493.1| probable 5'-nucleotidase precursor [marine actinobacterium PHSC20C1] gi|88815988|gb|EAR25844.1| probable 5'-nucleotidase precursor [marine actinobacterium PHSC20C1] Length = 1422 Score = 38.6 bits (88), Expect = 0.96, Method: Composition-based stats. Identities = 14/74 (18%), Positives = 27/74 (36%), Gaps = 23/74 (31%) Query: 202 HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT------KPRGWT------ 249 Y++ ++ G +DHI++SP + A + RG+ Sbjct: 546 DGQYTY------TFDGELGS-LDHIIVSPSLADKVTDAAVWNINSPEWGDRGYAFGATEA 598 Query: 250 ----KPSDHTPVIV 259 + SDH P+ + Sbjct: 599 GTVFRSSDHDPISI 612 >gi|322802816|gb|EFZ23015.1| hypothetical protein SINV_01767 [Solenopsis invicta] Length = 109 Score = 38.6 bits (88), Expect = 0.97, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 23/59 (38%), Gaps = 8/59 (13%) Query: 209 DYYADSWSKNKGIR---IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 +Y + G R ID I + I+ + T SDH PV +++D+ Sbjct: 12 NYDTKTRLNYYGQRASNIDLIFANNNLARR-----INYQQLSNTWGSDHFPVEINVDVS 65 >gi|160884084|ref|ZP_02065087.1| hypothetical protein BACOVA_02060 [Bacteroides ovatus ATCC 8483] gi|156110426|gb|EDO12171.1| hypothetical protein BACOVA_02060 [Bacteroides ovatus ATCC 8483] Length = 611 Score = 38.6 bits (88), Expect = 0.97, Method: Composition-based stats. Identities = 31/278 (11%), Positives = 77/278 (27%), Gaps = 58/278 (20%) Query: 3 VVTVATWNV---NSIRARIH------NLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + T+N+ N + +A I +PD++ +Q Sbjct: 25 TLRLMTYNIKNANG----MDDICSFQRVANVINNASPDVVAIQ----------------- 63 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 +++ ++S + + ++ ++ LR+ + L Sbjct: 64 --EVDSMTRRSGQKYVLGEIAERTQMHACFAPAIEFEGGKYGIG-LLTKQVPLRLQTIPL 120 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 P + + +I + + + L + + Sbjct: 121 PGREEARTLILAEFEDYIYCCTHLSLTEGDRMKSLEIVKSLIASYKKPLFLAGDMNAEPE 180 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 ++ Q ++ + A ID+I +S + Sbjct: 181 SDFIKELQKDFQILSNPEKHTYPAPDPKEA-------------------IDYIAVSKQNA 221 Query: 234 S--LLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKK 269 + + SA++ + SDH P++V L E K Sbjct: 222 TGFAVISAKVVNELM----ASDHRPILVELRTAEKADK 255 >gi|147865625|emb|CAN80960.1| hypothetical protein VITISV_014609 [Vitis vinifera] Length = 753 Score = 38.6 bits (88), Expect = 0.97, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 38/126 (30%), Gaps = 3/126 (2%) Query: 18 IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH-IETCGQKSYNGVAILSKYQP 76 + A IK+N D++CLQETK ++ ++SL G G Sbjct: 265 RKVIKALIKKNRVDLVCLQETKIQE--MSRGLIRSLGVERFLEWGTVDSRGTTGGIVVIW 322 Query: 77 IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 V L + + + T +Y P +++ + + Sbjct: 323 DNRVFELIELEKGEHSISCHFKNCEDGFTWTFTGVYGPTMRRDRDCFWNELETIYGLWNG 382 Query: 137 FASQRL 142 + Sbjct: 383 PWVDYM 388 >gi|332022124|gb|EGI62446.1| Inositol polyphosphate 5-phosphatase K [Acromyrmex echinatior] Length = 436 Score = 38.6 bits (88), Expect = 0.98, Method: Composition-based stats. Identities = 38/318 (11%), Positives = 83/318 (26%), Gaps = 70/318 (22%) Query: 4 VTV--ATWNVN--------------SIRARIHNLAAWIKENNPD--IICLQETKTEDKNF 45 + + T+NV I + + W PD + LQE K++ +N Sbjct: 8 LRIYFITYNVATKFPDPREDLHQLLGITSCDKSKLVW-----PDLYFVGLQEVKSQPQNL 62 Query: 46 PFE--TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDL--------------- 88 + + K Y+ V + S+ ++ Sbjct: 63 ILDYILFEDPWTKAFRDVLKKYDYVKVRSQRLQGLVLNVFCLRKHLTHLRLIETQYTKTG 122 Query: 89 ----DVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL 144 + ++ + N +L + + + + D + + A + Sbjct: 123 FGGIWGNKGAVSIRMNTYGVSICVVNTHLTPHDHLLADRVSDYNTIVTDHTFTAPFTSRI 182 Query: 145 EEPLIFAG----DYNIIPQPHDCYNPIIWENDAC-----FTLEVRQSFQKLQNMGFTDAI 195 ++ + + + + ++ ++ Q + Sbjct: 183 LYHDYIFWIGDLNFRLNGEELTAADIDLLVKKKQLKELLERDQLMMVMKEQQAFAELNES 242 Query: 196 RATHDTHHLYSFWDY-----YADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 T + Y F SW+ D I+ A + I T+ + Sbjct: 243 SITFPPTYKYEFESQEFDLKRRPSWT-------DRILYKVNAADIYDDIEIHTEQHTYKS 295 Query: 251 P-----SDHTPVIVSLDI 263 SDH PV DI Sbjct: 296 HPDYSVSDHKPVTGEFDI 313 >gi|307219280|gb|ADN39445.1| RT09974p [Drosophila melanogaster] Length = 1292 Score = 38.6 bits (88), Expect = 0.98, Method: Composition-based stats. Identities = 12/160 (7%), Positives = 37/160 (23%), Gaps = 2/160 (1%) Query: 34 CLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR 93 CL E K ++ + ++S + + I + Sbjct: 801 CLGEIKCQNNATCIDGVESYKCECQPGFSGEFCDTKIQFCSPEFNPCANGAKCMDHFTHY 860 Query: 94 FIEATFTINTQTLR--IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFA 151 + + I + + + + + E + Sbjct: 861 SCDCQAGFHGTNCTDNIDDCQNHMCQNGGTCVDGINDYQCRCPDDYTGKYCEGHNMISMM 920 Query: 152 GDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191 Q H+C + + ++ +A + + + Sbjct: 921 YPQTSPCQNHECKHGVCFQPNAQGSDYLCRCHPGYTGKWC 960 >gi|147816091|emb|CAN72890.1| hypothetical protein VITISV_022310 [Vitis vinifera] Length = 1356 Score = 38.6 bits (88), Expect = 0.98, Method: Composition-based stats. Identities = 11/60 (18%), Positives = 22/60 (36%), Gaps = 9/60 (15%) Query: 201 THHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 +++ + N+ R+D ++SP PR SDH P+++ Sbjct: 231 QGGDFTW-----NGGLNNQTWARLDRFLVSPSWIDQFSGINQCRLPR---PVSDHFPIML 282 >gi|308274459|emb|CBX31058.1| unknown protein [uncultured Desulfobacterium sp.] Length = 73 Score = 38.6 bits (88), Expect = 0.99, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 17/40 (42%) Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 D I +S + ID + + SDH P + +D+ Sbjct: 34 DQIWVSQALAGRFANPTIDRRTKHKGDGSDHDPAWIDIDL 73 >gi|293368736|ref|ZP_06615341.1| Ser/Thr phosphatase family protein [Bacteroides ovatus SD CMC 3f] gi|298480109|ref|ZP_06998308.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. D22] gi|292636201|gb|EFF54688.1| Ser/Thr phosphatase family protein [Bacteroides ovatus SD CMC 3f] gi|298273918|gb|EFI15480.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides sp. D22] Length = 611 Score = 38.6 bits (88), Expect = 0.99, Method: Composition-based stats. Identities = 31/278 (11%), Positives = 77/278 (27%), Gaps = 58/278 (20%) Query: 3 VVTVATWNV---NSIRARIH------NLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 + + T+N+ N + +A I +PD++ +Q Sbjct: 25 TLRLMTYNIKNANG----MDDICSFQRVANVINNASPDVVAIQ----------------- 63 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 +++ ++S + + ++ ++ LR+ + L Sbjct: 64 --EVDSMTRRSGQKYVLGEIAERTQMHACFAPAIEFEGGKYGIG-LLTKQVPLRLQTIPL 120 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 P + + +I + + + L + + Sbjct: 121 PGREEARTLILAEFEDYIYCCTHLSLTEGDRMKSLEIVKSLIASYKKPLFLAGDMNAEPE 180 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 ++ Q ++ + A ID+I +S + Sbjct: 181 SDFIKELQKDFQILSNPEKHTYPAPDPKEA-------------------IDYIAVSKQNA 221 Query: 234 S--LLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKK 269 + + SA++ + SDH P++V L E K Sbjct: 222 TGFAVISAKVVNELM----ASDHRPILVELRTAEKADK 255 >gi|294812176|ref|ZP_06770819.1| Endonuclease/exonuclease/phosphatase [Streptomyces clavuligerus ATCC 27064] gi|326440668|ref|ZP_08215402.1| hypothetical protein SclaA2_06358 [Streptomyces clavuligerus ATCC 27064] gi|294324775|gb|EFG06418.1| Endonuclease/exonuclease/phosphatase [Streptomyces clavuligerus ATCC 27064] Length = 251 Score = 38.6 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 12/35 (34%), Positives = 20/35 (57%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQE 37 VV V ++NV S+R L ++ PD++ +QE Sbjct: 18 VVRVLSYNVRSLRDDEDALIRVVRAAAPDLVLVQE 52 >gi|242381487|emb|CAY39203.1| hypothetical protein [Streptomyces clavuligerus] Length = 237 Score = 38.6 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 12/35 (34%), Positives = 20/35 (57%) Query: 3 VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQE 37 VV V ++NV S+R L ++ PD++ +QE Sbjct: 18 VVRVLSYNVRSLRDDEDALIRVVRAAAPDLVLVQE 52 >gi|242082908|ref|XP_002441879.1| hypothetical protein SORBIDRAFT_08g004125 [Sorghum bicolor] gi|241942572|gb|EES15717.1| hypothetical protein SORBIDRAFT_08g004125 [Sorghum bicolor] Length = 605 Score = 38.6 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 30/71 (42%), Gaps = 13/71 (18%) Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL--HSARIDTKPRGWTKPSDHTPVI 258 Y++ ++ +ID + S T SA I PSDH P++ Sbjct: 95 QGRKYTW----SNMQPSPLLQKIDWVFTSNAWTLKYPDTSATILD-----RTPSDHCPLL 145 Query: 259 VSL--DIPEPR 267 V++ +IP+P+ Sbjct: 146 VTISTNIPKPK 156 >gi|240141286|ref|YP_002965766.1| hypothetical protein MexAM1_META1p4880 [Methylobacterium extorquens AM1] gi|240011263|gb|ACS42489.1| conserved hypothetical protein [Methylobacterium extorquens AM1] Length = 239 Score = 38.6 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 6/37 (16%) Query: 7 ATWNVNSIR---ARIHNLAAWIKENNPDIICLQE-TK 39 +WN+ +R A + L A I++ PD + +QE TK Sbjct: 1 MSWNL--LRRTGAAVDCLVALIEQERPDFLLMQEATK 35 >gi|224023659|ref|ZP_03642025.1| hypothetical protein BACCOPRO_00371 [Bacteroides coprophilus DSM 18228] gi|224016881|gb|EEF74893.1| hypothetical protein BACCOPRO_00371 [Bacteroides coprophilus DSM 18228] Length = 637 Score = 38.6 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 7/42 (16%), Positives = 19/42 (45%), Gaps = 5/42 (11%) Query: 2 SVVTVATWNVN---SI--RARIHNLAAWIKENNPDIICLQET 38 + + + ++N+ + + +A +E D++ LQE Sbjct: 37 NDLKIISYNIRHGEGLDGKTDYVRIARMFREQQADVVALQEV 78 >gi|147798829|emb|CAN61071.1| hypothetical protein VITISV_006592 [Vitis vinifera] Length = 1198 Score = 38.6 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 9/59 (15%), Positives = 22/59 (37%), Gaps = 7/59 (11%) Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 ++S+ + + R+D +++ L + R SDH P+++ Sbjct: 918 QRGVFSW----SGGRNNQSWARLDRFLVTQSWLDLFRGVV---QSRLPRPTSDHFPILL 969 >gi|311977773|ref|YP_003986893.1| hypothetical protein MIMI_gp0419 [Acanthamoeba polyphaga mimivirus] gi|82000306|sp|Q5UQW5|YL388_MIMIV RecName: Full=Uncharacterized protein L388 gi|55417007|gb|AAV50657.1| unknown [Acanthamoeba polyphaga mimivirus] gi|308204374|gb|ADO18175.1| putative endonuclease/exonuclease/phosphatase [Acanthamoeba polyphaga mimivirus] Length = 268 Score = 38.6 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 35/255 (13%), Positives = 73/255 (28%), Gaps = 20/255 (7%) Query: 17 RIHNLAAWIKENNPDIICLQET-KTED----KNFPFETLQSLNYHIETCGQKSYNGVAIL 71 R + I+ NPDII QE K ++ + F E L + +Y I+ + A++ Sbjct: 25 RRDLIINLIEAENPDIILFQECNKLQNTEDMEKF-MEDLPNYDYVIKYSLPGVFRSRALI 83 Query: 72 SKYQPIEIVTHLPGDDLDVQAR----FIEATFTINTQTLRIGNLYLPHGNPITSTKYDDK 127 Y P +++ + + + +G +L + ++ Sbjct: 84 IAYNPNKLIKNSEIVKWFSDTPDVPSIGWGNPDDDFGRIILGCEFLEKNSDKKFWIFNVH 143 Query: 128 ISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQ 187 +R + L D II + + + Sbjct: 144 FDIDVESIRKSILLLPELIDKQCLSDSKIILAGDFNTDDKLLFDTLKNNNFD-------- 195 Query: 188 NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRG 247 + T SF + + + +DH+ ++ Sbjct: 196 --RLSQTFNTTDKVKLNVSFVGKRDNFGKLTEDLYLDHVFGREVYNYNIYCPFEYDFIIN 253 Query: 248 WTKPSDHTPVIVSLD 262 SDH PV++ + Sbjct: 254 KYIVSDHLPVVIIFE 268 >gi|254523952|ref|ZP_05136007.1| endonuclease/exonuclease/phosphatase [Stenotrophomonas sp. SKA14] gi|219721543|gb|EED40068.1| endonuclease/exonuclease/phosphatase [Stenotrophomonas sp. SKA14] Length = 245 Score = 38.6 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 15/96 (15%), Positives = 31/96 (32%), Gaps = 14/96 (14%) Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 +A + ++ + R + +F + D IDHI++S Sbjct: 160 HPNAVLMGDFNCLAERPEMQVLYQKTRLQPPGCIVPTFPSWRPD-------RAIDHILVS 212 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 + A SDH + +++D+P Sbjct: 213 SGLQTRTVEAV-------PAAFSDHLALAMAIDVPA 241 >gi|194367178|ref|YP_002029788.1| endonuclease/exonuclease/phosphatase [Stenotrophomonas maltophilia R551-3] gi|194349982|gb|ACF53105.1| Endonuclease/exonuclease/phosphatase [Stenotrophomonas maltophilia R551-3] Length = 245 Score = 38.6 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 15/96 (15%), Positives = 31/96 (32%), Gaps = 14/96 (14%) Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 +A + ++ + R + +F + D IDHI++S Sbjct: 160 HPNAVLMGDFNCLAERPEMQVLYQKTRLQPPGCIVPTFPSWRPD-------RAIDHILVS 212 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 + A SDH + +++D+P Sbjct: 213 SGLQTRTVEAV-------PAAFSDHLALAMAIDVPA 241 >gi|95928596|ref|ZP_01311343.1| Endonuclease/exonuclease/phosphatase [Desulfuromonas acetoxidans DSM 684] gi|95135386|gb|EAT17038.1| Endonuclease/exonuclease/phosphatase [Desulfuromonas acetoxidans DSM 684] Length = 230 Score = 38.6 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 11/41 (26%), Positives = 20/41 (48%), Gaps = 7/41 (17%) Query: 4 VTVATWNV------NSIRARIHNLAAWIKENNPDIICLQET 38 + +ATWN+ + R + + I++ D+I LQE Sbjct: 6 LRLATWNIHMAVGSDGQRD-LSRIIKVIRQLRADVIGLQEV 45 >gi|308193419|gb|ADO16251.1| RT09980p [Drosophila melanogaster] Length = 1468 Score = 38.6 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 12/160 (7%), Positives = 37/160 (23%), Gaps = 2/160 (1%) Query: 34 CLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR 93 CL E K ++ + ++S + + I + Sbjct: 977 CLGEIKCQNNATCIDGVESYKCECQPGFSGEFCDTKIQFCSPEFNPCANGAKCMDHFTHY 1036 Query: 94 FIEATFTINTQTLR--IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFA 151 + + I + + + + + E + Sbjct: 1037 SCDCQAGFHGTNCTDNIDDCQNHMCQNGGTCVDGINDYQCRCPDDYTGKYCEGHNMISMM 1096 Query: 152 GDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191 Q H+C + + ++ +A + + + Sbjct: 1097 YPQTSPCQNHECKHGVCFQPNAQGSDYLCRCHPGYTGKWC 1136 >gi|289671214|ref|ZP_06492289.1| endonuclease/exonuclease/phosphatase family protein [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 303 Score = 38.6 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 7/63 (11%) Query: 4 VTVATWNVNSIR----ARIHNLAAWIKENNPDIICLQET---KTEDKNFPFETLQSLNYH 56 +T+ T N++ R AR +A +K+ PD+I LQE + +N + L Y Sbjct: 48 MTLVTLNLHHDREDWPARRAYIAKELKQLAPDVIALQEVIERRGSVENQAAWLARKLGYD 107 Query: 57 IET 59 Sbjct: 108 YTF 110 >gi|289665777|ref|ZP_06487358.1| endonuclease/exonuclease/phosphatase family protein [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 303 Score = 38.6 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 7/63 (11%) Query: 4 VTVATWNVNSIR----ARIHNLAAWIKENNPDIICLQET---KTEDKNFPFETLQSLNYH 56 +T+ T N++ R AR +A +K+ PD+I LQE + +N + L Y Sbjct: 48 MTLVTLNLHHDREDWPARRAYIAKELKQLAPDVIALQEVIERRGSVENQAAWLARKLGYD 107 Query: 57 IET 59 Sbjct: 108 YTF 110 >gi|324096448|gb|ADY17753.1| RT11125p [Drosophila melanogaster] Length = 1468 Score = 38.6 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 12/160 (7%), Positives = 37/160 (23%), Gaps = 2/160 (1%) Query: 34 CLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR 93 CL E K ++ + ++S + + I + Sbjct: 977 CLGEIKCQNNATCIDGVESYKCECQPGFSGEFCDTKIQFCSPEFNPCANGAKCMDHFTHY 1036 Query: 94 FIEATFTINTQTLR--IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFA 151 + + I + + + + + E + Sbjct: 1037 SCDCQAGFHGTNCTDNIDDCQNHMCQNGGTCVDGINDYQCRCPDDYTGKYCEGHNMISMM 1096 Query: 152 GDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191 Q H+C + + ++ +A + + + Sbjct: 1097 YPQTSPCQNHECKHGVCFQPNAQGSDYLCRCHPGYTGKWC 1136 >gi|308818232|gb|ADO51076.1| RT09973p [Drosophila melanogaster] Length = 1474 Score = 38.6 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 12/160 (7%), Positives = 37/160 (23%), Gaps = 2/160 (1%) Query: 34 CLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR 93 CL E K ++ + ++S + + I + Sbjct: 980 CLGEIKCQNNATCIDGVESYKCECQPGFSGEFCDTKIQFCSPEFNPCANGAKCMDHFTHY 1039 Query: 94 FIEATFTINTQTLR--IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFA 151 + + I + + + + + E + Sbjct: 1040 SCDCQAGFHGTNCTDNIDDCQNHMCQNGGTCVDGINDYQCRCPDDYTGKYCEGHNMISMM 1099 Query: 152 GDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191 Q H+C + + ++ +A + + + Sbjct: 1100 YPQTSPCQNHECKHGVCFQPNAQGSDYLCRCHPGYTGKWC 1139 >gi|253756379|ref|YP_003029519.1| surface-anchored DNA nuclease [Streptococcus suis BM407] gi|251818843|emb|CAZ56686.1| surface-anchored DNA nuclease [Streptococcus suis BM407] Length = 1039 Score = 38.6 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 41/93 (44%), Gaps = 18/93 (19%) Query: 192 TDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL-------LHSARIDTK 244 + + HD +S++ Y ++ S +D++++S ++SA ++ Sbjct: 867 MANLVSRHDASDRFSYF-YNGNNQS------LDNMLVSTNLFERYAFDMVHVNSAFMEEH 919 Query: 245 PRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQN 277 R SDH P++V LD+ + ++ Q S Sbjct: 920 GR----ASDHDPLLVQLDVTKAQEPTQPEPSDK 948 >gi|195583744|ref|XP_002081676.1| GD25590 [Drosophila simulans] gi|194193685|gb|EDX07261.1| GD25590 [Drosophila simulans] Length = 1506 Score = 38.6 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 12/160 (7%), Positives = 37/160 (23%), Gaps = 2/160 (1%) Query: 34 CLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR 93 CL E K ++ + ++S + + I + Sbjct: 1015 CLGEIKCQNNATCIDGVESYKCECQPGFSGEFCDTKIQFCSPEFNPCANGAKCMDHFTHY 1074 Query: 94 FIEATFTINTQTLR--IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFA 151 + + I + + + + + E + Sbjct: 1075 SCDCQAGFHGTNCTDNIDDCQNHMCQNGGTCVDGINDYQCRCPDDYTGKYCEGHNMISMM 1134 Query: 152 GDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191 Q H+C + + ++ +A + + + Sbjct: 1135 YPQTSPCQNHECKHGVCFQPNAQGSDYLCRCHPGYTGKWC 1174 >gi|195488431|ref|XP_002092313.1| GE14122 [Drosophila yakuba] gi|194178414|gb|EDW92025.1| GE14122 [Drosophila yakuba] Length = 1507 Score = 38.6 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 12/160 (7%), Positives = 37/160 (23%), Gaps = 2/160 (1%) Query: 34 CLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR 93 CL E K ++ + ++S + + I + Sbjct: 1016 CLGEIKCQNNATCIDGVESYKCECQPGFSGEFCDTKIQFCSPEFNPCANGAKCMDHFTHY 1075 Query: 94 FIEATFTINTQTLR--IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFA 151 + + I + + + + + E + Sbjct: 1076 SCDCQAGFHGTNCTDNIDDCQNHMCQNGGTCVDGINDYQCRCPDDYTGKYCEGHNMISMM 1135 Query: 152 GDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191 Q H+C + + ++ +A + + + Sbjct: 1136 YPQTSPCQNHECKHGVCFQPNAQGSDYLCRCHPGYTGKWC 1175 >gi|195334727|ref|XP_002034028.1| GM20113 [Drosophila sechellia] gi|194125998|gb|EDW48041.1| GM20113 [Drosophila sechellia] Length = 1506 Score = 38.6 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 12/160 (7%), Positives = 37/160 (23%), Gaps = 2/160 (1%) Query: 34 CLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR 93 CL E K ++ + ++S + + I + Sbjct: 1015 CLGEIKCQNNATCIDGVESYKCECQPGFSGEFCDTKIQFCSPEFNPCANGAKCMDHFTHY 1074 Query: 94 FIEATFTINTQTLR--IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFA 151 + + I + + + + + E + Sbjct: 1075 SCDCQAGFHGTNCTDNIDDCQNHMCQNGGTCVDGINDYQCRCPDDYTGKYCEGHNMISMM 1134 Query: 152 GDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191 Q H+C + + ++ +A + + + Sbjct: 1135 YPQTSPCQNHECKHGVCFQPNAQGSDYLCRCHPGYTGKWC 1174 >gi|147858612|emb|CAN78865.1| hypothetical protein VITISV_013346 [Vitis vinifera] Length = 2935 Score = 38.6 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 8/27 (29%), Positives = 16/27 (59%) Query: 13 SIRARIHNLAAWIKENNPDIICLQETK 39 R + + +++ NPD++ +QETK Sbjct: 708 GSRNKRRMVKDFLRSENPDVVMIQETK 734 >gi|17136480|ref|NP_476727.1| slit, isoform C [Drosophila melanogaster] gi|161077132|ref|NP_001097334.1| slit, isoform E [Drosophila melanogaster] gi|33302576|sp|P24014|SLIT_DROME RecName: Full=Protein slit; Short=dSlit; Contains: RecName: Full=Protein slit N-product; Contains: RecName: Full=Protein slit C-product; Flags: Precursor gi|7303028|gb|AAF58097.1| slit, isoform C [Drosophila melanogaster] gi|157400354|gb|ABV53817.1| slit, isoform E [Drosophila melanogaster] Length = 1504 Score = 38.6 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 12/160 (7%), Positives = 37/160 (23%), Gaps = 2/160 (1%) Query: 34 CLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR 93 CL E K ++ + ++S + + I + Sbjct: 1013 CLGEIKCQNNATCIDGVESYKCECQPGFSGEFCDTKIQFCSPEFNPCANGAKCMDHFTHY 1072 Query: 94 FIEATFTINTQTLR--IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFA 151 + + I + + + + + E + Sbjct: 1073 SCDCQAGFHGTNCTDNIDDCQNHMCQNGGTCVDGINDYQCRCPDDYTGKYCEGHNMISMM 1132 Query: 152 GDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191 Q H+C + + ++ +A + + + Sbjct: 1133 YPQTSPCQNHECKHGVCFQPNAQGSDYLCRCHPGYTGKWC 1172 >gi|90022590|ref|YP_528417.1| metal-dependent hydrolase-like protein [Saccharophagus degradans 2-40] gi|89952190|gb|ABD82205.1| Endonuclease/exonuclease/phosphatase [Saccharophagus degradans 2-40] Length = 261 Score = 38.6 bits (88), Expect = 1.0, Method: Composition-based stats. Identities = 37/272 (13%), Positives = 75/272 (27%), Gaps = 59/272 (21%) Query: 5 TVATWNVNSIRA-------------RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51 TV ++N IR R +N+ I + NP +I LQE T + + E L Sbjct: 36 TVMSFN---IRTEHANDPGELAWEKRKNNVVDVIVKANPSVIGLQEASTNQQQYIEEALG 92 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 N+ + + + + ++A T + + Sbjct: 93 P-NWLPVANAPILFRSDMYRLLAKGAIELVEDKWEKRFAYWVKLKAKNTNTSWLFITTHW 151 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 + + + S + + P++ GD+N P Sbjct: 152 GVDEASQLGS--------AEILLNALPAVIKNWQLPVVLVGDFNAEPNSEPY-------- 195 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 ++ + + +FW + +ID+ + Sbjct: 196 -----------------------LKMVNGSPLQNNFWGLTFTGFKSKAIAQIDYAWAAGL 232 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + + D T SDH P+I + Sbjct: 233 TINKCKA---DRFDAYATPASDHYPIICEFKL 261 >gi|312218131|emb|CBX98077.1| similar to glucose-repressible alcohol dehydrogenase transcriptional effector [Leptosphaeria maculans] Length = 760 Score = 38.6 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 3/58 (5%) Query: 16 ARIHNLAAWIKENNPDIICLQETKTEDK--NFPFETLQSLNYHIETCGQKSYNGVAIL 71 +R + A ++E N DI+CLQE +D F E L +Y + +A Sbjct: 412 SRRELILAELRERNADIVCLQEID-QDSFNEFFREALAHNDYKGVFWPKSRARTMAER 468 >gi|310823846|ref|YP_003956204.1| hypothetical protein STAUR_6620 [Stigmatella aurantiaca DW4/3-1] gi|309396918|gb|ADO74377.1| uncharacterized protein [Stigmatella aurantiaca DW4/3-1] Length = 397 Score = 38.6 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 10/39 (25%), Positives = 19/39 (48%), Gaps = 7/39 (17%) Query: 4 VTVATWNVNSIR----ARIHNLAAWIKENNPDIICLQET 38 + T+N I+ + + +A+ I PD++ LQE Sbjct: 1 MRFMTYN---IKHAELSSLEAIASVINAQAPDVVALQEV 36 >gi|147815906|emb|CAN68199.1| hypothetical protein VITISV_039763 [Vitis vinifera] Length = 607 Score = 38.6 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 9/60 (15%), Positives = 21/60 (35%), Gaps = 9/60 (15%) Query: 201 THHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 ++S+ N+ R+D +++ + R SDH P+++ Sbjct: 508 QGGVFSWSGXR-----NNQXWARLDRFLVTQNWLDHFSGVV---QSRLPRPTSDHFPILL 559 >gi|308070047|ref|YP_003871652.1| Predicted extracellular nuclease [Paenibacillus polymyxa E681] gi|305859326|gb|ADM71114.1| Predicted extracellular nuclease [Paenibacillus polymyxa E681] Length = 691 Score = 38.6 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 10/53 (18%), Positives = 23/53 (43%), Gaps = 3/53 (5%) Query: 223 IDHIMLSPEATSLLHSARIDTKPR---GWTKPSDHTPVIVSLDIPEPRKKQQD 272 +DH+++SP + + + SDH P++ +D+P ++ Sbjct: 591 LDHMLVSPSLSKTSVLDIVHMNADFSAADGRVSDHDPLVAQIDVPRKTEEPPT 643 >gi|291302792|ref|YP_003514070.1| endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis DSM 44728] gi|290572012|gb|ADD44977.1| Endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis DSM 44728] Length = 940 Score = 38.6 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 19/48 (39%), Gaps = 1/48 (2%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQ 270 +DHI++SP + + SDH P + L+ P K Sbjct: 758 LDHILVSPALA-KADYEVVHINAEFAEQNSDHDPQVARLNFPPKCTKT 804 >gi|290983315|ref|XP_002674374.1| endonuclease/exonuclease/phosphatase family member [Naegleria gruberi] gi|284087964|gb|EFC41630.1| endonuclease/exonuclease/phosphatase family member [Naegleria gruberi] Length = 322 Score = 38.6 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 2/37 (5%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53 R+ L + PDI+CLQE E F + L+ L Sbjct: 70 RVKKLLRDFTIHQPDILCLQEV--ELACFEKDVLEPL 104 >gi|295689871|ref|YP_003593564.1| endonuclease/exonuclease/phosphatase [Caulobacter segnis ATCC 21756] gi|295431774|gb|ADG10946.1| Endonuclease/exonuclease/phosphatase [Caulobacter segnis ATCC 21756] Length = 288 Score = 38.6 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 37/282 (13%), Positives = 63/282 (22%), Gaps = 43/282 (15%) Query: 4 VTVATWNV-----NSIRARIHN-------LAAWIKENNPDIICLQET---KTEDKNFPFE 48 + VATWN+ + + + + + N D++ +E K Sbjct: 27 LRVATWNMEHLSEDGAKGCKPRTDADYETMRRYAERLNADVVAFEEVESVKA-----AAR 81 Query: 49 TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108 Y + + + N R + T Sbjct: 82 VFDPAKYQLLIEARPAGNPFPCGEGRTLTRQAVGFAIRKGITVERAPDLTDLQLGD---- 137 Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168 G + + + S + A +P + Sbjct: 138 ---PNLRGGVDVTIRAPGHAPLRLLAVHLKSGCFAGDAAKACATLMRQVPILERWIDARA 194 Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF--------WDYYADSWSKNKG 220 E L + I + S D + Sbjct: 195 AEGVRFAVLGDFNRRLARADDVVWREIDDADPPNADLSLAEGSAGPKCDPRYSEF----- 249 Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 IDHI+L A L T G + SDH PV+ L Sbjct: 250 --IDHIVLDARAARDLEGFEELTYAAG-ERGSDHCPVLARLK 288 >gi|218185789|gb|EEC68216.1| hypothetical protein OsI_36205 [Oryza sativa Indica Group] Length = 1032 Score = 38.6 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 8/68 (11%), Positives = 30/68 (44%), Gaps = 5/68 (7%) Query: 204 LYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +++ + N +R+D + ++ +A++ + SDH P++++ + Sbjct: 778 PHTYDNRREGC--NNVKVRLDRAIADDRWRDIVTNAQVVHLV---SPCSDHCPILLNFHV 832 Query: 264 PEPRKKQQ 271 + + ++ Sbjct: 833 KDDSRTRK 840 >gi|306821497|ref|ZP_07455099.1| conserved hypothetical protein [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550455|gb|EFM38444.1| conserved hypothetical protein [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 144 Score = 38.6 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 7/42 (16%) Query: 21 LAAWIKENNPDIICL----QETKTEDK---NFPFETLQSLNY 55 + ++KE DI+ L QE K D+ +F L Y Sbjct: 42 IREYLKEKEVDIVFLNEKIQEVKALDESKKDFTNAILHIWGY 83 >gi|220909980|ref|YP_002485291.1| Endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 7425] gi|219866591|gb|ACL46930.1| Endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 7425] Length = 244 Score = 38.6 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 30/263 (11%), Positives = 65/263 (24%), Gaps = 29/263 (11%) Query: 3 VVTVATWNVN----SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 + +ATWN++ + + I+ N D+ L ET + + + + Sbjct: 5 TLRIATWNLDHPKPGSWQKTPAILQQIEAINADVWILTETNNKAVDLAAKGYEKFTSIEY 64 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 T N + D + + I + Sbjct: 65 TDKGLEQNAYTTIWSRLQAPTQIIKTFDPDLSVCIKVSQPIDLMIYGTIITWHGDRGSDG 124 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 + + + S ++ E + + + + D Sbjct: 125 TSKSWEEHYRSIQHHGDDWSRLIQEYSDHKLLVAGDFNQARDGSRWYGTQKGIDLLTAQL 184 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R L + N+G +DH+ +S + + Sbjct: 185 DRNHLVCLTDQIQ------------------------PTNRGN-VDHVCISQDLQPFCTA 219 Query: 239 ARIDTKPRGWTKPSDHTPVIVSL 261 + + K SDH V + L Sbjct: 220 SFWNNISDQGVKLSDHNGVFIDL 242 >gi|163749176|ref|ZP_02156426.1| hypothetical protein KT99_20084 [Shewanella benthica KT99] gi|161331246|gb|EDQ02135.1| hypothetical protein KT99_20084 [Shewanella benthica KT99] Length = 365 Score = 38.6 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 23/114 (20%), Positives = 40/114 (35%), Gaps = 20/114 (17%) Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY--SFWDYYADSWSKNK-----GIRID 224 D + S + ++ D++ LY S + + G +D Sbjct: 252 DTRIKPQADMSQGAMGDIAHQLGFYRLQDSYDLYQASQYSLSEQARPATHYYFAQGSVLD 311 Query: 225 HIMLSPEATSL--LHSARIDTKP---RGWTKPS--------DHTPVIVSLDIPE 265 +I+LS E + L A + R PS DH PV++++ I E Sbjct: 312 YILLSSEFDAKNDLSLAEVGRYETYDRHLINPSFEHDSQSTDHAPVMITIAIRE 365 Score = 37.1 bits (84), Expect = 2.6, Method: Composition-based stats. Identities = 10/50 (20%), Positives = 20/50 (40%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAI 70 +A ++ E+ PD+I QE + D+ L+Y + + Sbjct: 48 IAKYLNEHQPDVIAFQEVFSPDELETLTKACGLDYFSVLDSPQVMDDFIY 97 >gi|4590406|gb|AAD26567.1|AF126540_1 slit protein [Drosophila melanogaster] Length = 1504 Score = 38.6 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 12/160 (7%), Positives = 37/160 (23%), Gaps = 2/160 (1%) Query: 34 CLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR 93 CL E K ++ + ++S + + I + Sbjct: 1013 CLGEIKCQNNATCIDGVESYKCECQPGFSGEFCDTKIQFCSPEFNPCANGAKCMDHFTHY 1072 Query: 94 FIEATFTINTQTLR--IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFA 151 + + I + + + + + E + Sbjct: 1073 SCDCQAGFHGTNCTDNIDDCQNHMCQNGGTCVDGINDYQCRCPDDYTGKYCEGHNMISMM 1132 Query: 152 GDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191 Q H+C + + ++ +A + + + Sbjct: 1133 YPQTSPCQNHECKHGVCFQPNAQGSDYLCRCHPGYTGKWC 1172 >gi|167521309|ref|XP_001744993.1| hypothetical protein [Monosiga brevicollis MX1] gi|163776607|gb|EDQ90226.1| predicted protein [Monosiga brevicollis MX1] Length = 1203 Score = 38.6 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 6/44 (13%) Query: 2 SVVTVATWNVNSI----RARI--HNLAAWIKENNPDIICLQETK 39 S + V T NV+ R+R+ H + + PD+ICLQE K Sbjct: 828 SDLRVMTLNVHEFFDPSRSRLLNHEVNKCVSLFAPDVICLQEVK 871 >gi|147838082|emb|CAN65207.1| hypothetical protein VITISV_016719 [Vitis vinifera] Length = 1391 Score = 38.6 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 14/118 (11%), Positives = 37/118 (31%), Gaps = 9/118 (7%) Query: 144 LEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHH 203 EE G + YN +++ + + + ++ + + Sbjct: 617 WEEIRAIRGLWEDPWCVGGDYNITLFQRERSRQGRITSAMRRFAQIVDELGLMDIPLQGG 676 Query: 204 LYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 ++++ N+ R+D +++ + R SDH PV++ Sbjct: 677 VFTW-----SGGPNNQSWARLDRFLVNTSWLDQFSGVL---QSRLPRPLSDHFPVLLE 726 >gi|229015042|ref|ZP_04172107.1| hypothetical protein bmyco0001_54100 [Bacillus mycoides DSM 2048] gi|228746238|gb|EEL96176.1| hypothetical protein bmyco0001_54100 [Bacillus mycoides DSM 2048] Length = 236 Score = 38.6 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 37/262 (14%), Positives = 72/262 (27%), Gaps = 30/262 (11%) Query: 4 VTVATWNVNS--IRARIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYHIETC 60 + + WN R +I + +I+ + E K + + +Q+ + Sbjct: 1 MKIVAWN-AGMAFRKKIDKILPL----KANILVISECEK--PEKWERSVVQNSTDNFLWE 53 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 G G+ I++ + +I H D ++ T + + Sbjct: 54 GDNPNKGIGIITLDKRYKIEIHPDYDKKFRYIIPLKVTGEQEFIMFAVWS---------Q 104 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + + +L L+EP I GD+N F Sbjct: 105 KGEKRYSSYIGQIYLALEKYASLLKEPCIIVGDWNSSKVFDHIKRVKTHSEVVEFLEGFG 164 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 N + +H K ID + S + L S Sbjct: 165 IKSAYHCNTYEKQGQEKSPTYYHR----------KDKTSSYHIDFLFASEIFLNQLESIE 214 Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262 + + W + SDH P+ + Sbjct: 215 VGSYE-EWIEFSDHMPISAEFN 235 >gi|255947092|ref|XP_002564313.1| Pc22g02690 [Penicillium chrysogenum Wisconsin 54-1255] gi|211591330|emb|CAP97557.1| Pc22g02690 [Penicillium chrysogenum Wisconsin 54-1255] Length = 681 Score = 38.6 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 23/58 (39%), Gaps = 6/58 (10%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYHIETCG 61 V +W R + ++ +N DI+CLQE + NF E L +Y Sbjct: 336 RVLSW-----EFRRELILNELRSHNADIVCLQEVDQGSYNNFFREQLAYNDYKGVYWP 388 >gi|119946106|ref|YP_943786.1| hypothetical protein Ping_2456 [Psychromonas ingrahamii 37] gi|119864710|gb|ABM04187.1| Endonuclease/exonuclease/phosphatase [Psychromonas ingrahamii 37] Length = 279 Score = 38.6 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 40/246 (16%), Positives = 62/246 (25%), Gaps = 41/246 (16%) Query: 18 IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPI 77 I N I+E D + QE K FP + L+ I Sbjct: 62 IENFETLIQEYPCDFLLFQEVK-----FPKKIASVLDAFSYAMASNIETSQHIYGVLTAT 116 Query: 78 EIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF 137 +I L Q T + + + T + F Sbjct: 117 KIAFTTISSHLTHQREVGLITHK------SMLITHHKLPDGRTLHIVNIHGINFVSIKGF 170 Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA 197 + +++ L I+ + W LE Q L+ + Sbjct: 171 IKELEKIKAVLHSCSGPIIVAGDFNN-----WTKKRIMALETFQHALGLEKADIQEGHHV 225 Query: 198 THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257 H +DHI LL + IDTK K SDH P+ Sbjct: 226 KHIFAKP------------------LDHIFYRE--LKLLQAEAIDTK-----KISDHNPI 260 Query: 258 IVSLDI 263 + + Sbjct: 261 YATFSV 266 >gi|325920888|ref|ZP_08182783.1| putative extracellular nuclease [Xanthomonas gardneri ATCC 19865] gi|325548640|gb|EGD19599.1| putative extracellular nuclease [Xanthomonas gardneri ATCC 19865] Length = 572 Score = 38.6 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 22/56 (39%), Gaps = 14/56 (25%) Query: 222 RIDHIMLSPEATSLLHSAR---IDTKPR-----------GWTKPSDHTPVIVSLDI 263 R+DH +LSP L A I+ G + SDH PV++ + Sbjct: 517 RLDHALLSPAMAKQLRGAVEWHINADVMDDAGYAKRNLAGPWRSSDHDPVLLGFSL 572 >gi|289669936|ref|ZP_06491011.1| nuclease [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 378 Score = 38.6 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 22/56 (39%), Gaps = 14/56 (25%) Query: 222 RIDHIMLSPEATSLLHSAR---IDTKPR-----------GWTKPSDHTPVIVSLDI 263 R+DH +LSP L A I+ G + SDH PV++ + Sbjct: 323 RLDHALLSPAMAKQLRGAVEWHINADVMDAAGYAKRNLPGPWRSSDHDPVLLGFSL 378 >gi|254508339|ref|ZP_05120461.1| metal-dependent hydrolase [Vibrio parahaemolyticus 16] gi|219548753|gb|EED25756.1| metal-dependent hydrolase [Vibrio parahaemolyticus 16] Length = 295 Score = 38.6 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 29/243 (11%), Positives = 63/243 (25%), Gaps = 17/243 (6%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIET----CGQKSYNGVAILSKYQPIEIV 80 + DI+ QE D+ + + Y + + + + +++Y + Sbjct: 62 FSSMDSDIVAFQEV--NDEKALRKVI-GKQYRVFFSTRRNPEHAAHQFTAINQYTGFAVR 118 Query: 81 THLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQ 140 + + + + + + + S + S R Sbjct: 119 EGISVIEKESLQLDTSHRSKLRFASYVVISPTSDTPIHALSVHLKARCSGAFRHNDACRT 178 Query: 141 RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHD 200 E L N + L + D+ Sbjct: 179 LKRQGEALNHWIREREAHGERYMILGDFNHNMSYPKD-------WLWEIVSQDSTAKLAT 231 Query: 201 THHLYSFWDYYADSWSKNKGIR--IDHIMLSPEA-TSLLHSARIDTKPRGWTKPSDHTPV 257 + ++ SK R IDH++ S + S + T K SDH P+ Sbjct: 232 RETKATCKVRSRNNPSKTHQFRSLIDHVITSDQISVSKIEQRNYKTDDLFRYKLSDHCPI 291 Query: 258 IVS 260 ++ Sbjct: 292 TLT 294 >gi|166714173|ref|ZP_02245380.1| nuclease [Xanthomonas oryzae pv. oryzicola BLS256] Length = 572 Score = 38.6 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 22/56 (39%), Gaps = 14/56 (25%) Query: 222 RIDHIMLSPEATSLLHSAR---IDTKPR-----------GWTKPSDHTPVIVSLDI 263 R+DH +LSP L A I+ G + SDH PV++ + Sbjct: 517 RLDHALLSPAMAKQLRGAVEWHINADVMDAAGYAKRNLPGPWRSSDHDPVLLGFSL 572 >gi|312883334|ref|ZP_07743060.1| Endonuclease/Exonuclease/phosphatase family protein [Vibrio caribbenthicus ATCC BAA-2122] gi|309368950|gb|EFP96476.1| Endonuclease/Exonuclease/phosphatase family protein [Vibrio caribbenthicus ATCC BAA-2122] Length = 303 Score = 38.6 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 35/262 (13%), Positives = 66/262 (25%), Gaps = 41/262 (15%) Query: 18 IHNLAAWIKENNPDIICLQET-------KT--EDKNFPFETLQSLNYHIETCGQKSYNGV 68 + L + + + DI+ QE K D I + Sbjct: 53 LRLLRKYFIKTSADIMAFQEVNDVSIISKVVGSDYKVILSQRSKAENQIHQFSDINQYTG 112 Query: 69 AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT------QTLRIGNLYLPHGNPITST 122 + K + + D + + T L + N Sbjct: 113 FAVKKSFKVRDHKDIQLDKRLKSRLRFASYIELTTPSKQSVHLLSVHLKAGCRKNYQEKR 172 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 + + +R + + I GD+N + + L + + Sbjct: 173 NCRILKEQLININSWIREREKYQHDYIVLGDFNSQIADEAKWAWYLISKKTQAVLTSQNT 232 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242 + T S + Y + IDHI++S +A+ Sbjct: 233 TAQCYVRSKTKRA----------SVFKYKSI---------IDHIIVSSS--HTFTTAKQL 271 Query: 243 ----TKPRGWTKPSDHTPVIVS 260 R + SDH PVI+ Sbjct: 272 PFKTKDVRQYE-LSDHCPVIIE 292 >gi|296454683|ref|YP_003661826.1| endonuclease/exonuclease/phosphatase [Bifidobacterium longum subsp. longum JDM301] gi|296184114|gb|ADH00996.1| Endonuclease/exonuclease/phosphatase [Bifidobacterium longum subsp. longum JDM301] Length = 370 Score = 38.6 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 31/260 (11%), Positives = 65/260 (25%), Gaps = 47/260 (18%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTED--KNFPFETLQSLNYHIETCGQ 62 V T+NV +A + +++ +++ LQET TED K ++ + + Sbjct: 150 RVMTFNVYKGQADPQAIVELVRDQRVEVLALQET-TEDFVKKLNEAGIEHYLPYAQVSSS 208 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122 G + S + + + + G Sbjct: 209 DGVFGNGLWSATPLADPADDDVNSSASFMPGGTVDMGGQQIRFVSVHTTAPVPG------ 262 Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182 W + R + IF GD+N + + Sbjct: 263 ---YWRQWKRSLDELGPMRGHTDTRYIFMGDFNATYDHTPFRDFL--------------- 304 Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYY--ADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 +S+ ++ IDH++L + Sbjct: 305 ------GDRFVDAARESGHGFTFSWPTNRVYMPMFAG-----IDHVVLDQGM--KAGQCK 351 Query: 241 IDTKPRGWTKPSDHTPVIVS 260 + SDH ++ + Sbjct: 352 VVKVE-----GSDHAALLAT 366 >gi|326406489|gb|ADZ63560.1| endonuclease/exonuclease/phosphatase family protein [Lactococcus lactis subsp. lactis CV56] Length = 352 Score = 38.6 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 33/269 (12%), Positives = 66/269 (24%), Gaps = 30/269 (11%) Query: 14 IRARIHNLAAWIKENNPDIICLQET--------KTEDKNFPFETLQSL------NYHIET 59 +++ I I + PD +QE + + L NY Sbjct: 93 VKSAIQEDIRLINKEKPDFGNIQEIDWQGDRSQQVNEPQMVRAGLPDYTSVLTQNYDSAY 152 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-TQTLRIGNLYLPHGNP 118 + + + + + L + + + Sbjct: 153 LFYPVTKPIGKAKSGIMTYSKYEIESSTRYKLPIETNFNKFFDLDRAFSVSILPIKNSDK 212 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 ++I Q L L + + + + A Sbjct: 213 KFVIFNTHLSAFITDQKIQKQQLLTLFDEMK----KYVSKGDYVICGADYNHALAGKAHP 268 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWD----YYADSWSKNKGIRIDHIMLSPEATS 234 ++ T +R T+ + Y + GI ID ++S Sbjct: 269 ELTWMKEFPTENLTKGMRVVAPTNAP-TVRSLDYAYDKKNPKNTFGI-IDGFLVSNNIKD 326 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 L ID + K SDH PV++ + Sbjct: 327 -LKIQTIDNQ----FKSSDHQPVVMDFSL 350 >gi|320538511|ref|ZP_08038372.1| endonuclease/exonuclease/phosphatase family protein [Treponema phagedenis F0421] gi|320144618|gb|EFW36373.1| endonuclease/exonuclease/phosphatase family protein [Treponema phagedenis F0421] Length = 353 Score = 38.6 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 37/262 (14%), Positives = 69/262 (26%), Gaps = 55/262 (20%) Query: 30 PDIICLQET---KTEDKNFPFETLQSLNYHIETCGQKSYN---GVAILSKYQPIEIVTHL 83 PDI+ LQE + + F + + +Y+ N A+LSK +++ H Sbjct: 112 PDILILQEIEGERVIND-FCRQLSRKESYNYAVITPIEKNAAFTTALLSKLPILDVFIHR 170 Query: 84 PGDDLDVQARFIEATFTI----NTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFAS 139 + + E I + L + + + + + Sbjct: 171 LHTEKESVRPLCEVWINIGSEEYPEPLVVFSTHWKSKLGKNTAEIRRMQEKQVFQKIQEL 230 Query: 140 QRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH 199 ++ + + GD+N + D + + C L + Sbjct: 231 KKTNPDIHYVICGDFNQPLEEFDLLTELPNSWNRCEYLRALSVNAQPGGSFC-------- 282 Query: 200 DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID----------------- 242 Y + W IDHI S + I+ Sbjct: 283 ----------YKGN-WQA-----IDHIFYSENLSDN-KGLDIEHFAVIAIPPLITSAGKP 325 Query: 243 --TKPRGWTKPSDHTPVIVSLD 262 SDH P+ V L Sbjct: 326 NAYSVFSGKGYSDHLPIGVRLK 347 >gi|330939748|ref|XP_003305882.1| hypothetical protein PTT_18837 [Pyrenophora teres f. teres 0-1] gi|311316921|gb|EFQ86022.1| hypothetical protein PTT_18837 [Pyrenophora teres f. teres 0-1] Length = 756 Score = 38.6 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 9/23 (39%), Positives = 15/23 (65%) Query: 16 ARIHNLAAWIKENNPDIICLQET 38 +R + A ++E + DI+CLQE Sbjct: 410 SRRELILAELRERDADIVCLQEI 432 >gi|281491447|ref|YP_003353427.1| endonuclease/exonuclease/phosphatase family protein [Lactococcus lactis subsp. lactis KF147] gi|281375165|gb|ADA64678.1| Endonuclease/exonuclease/phosphatase family protein [Lactococcus lactis subsp. lactis KF147] Length = 352 Score = 38.6 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 33/269 (12%), Positives = 66/269 (24%), Gaps = 30/269 (11%) Query: 14 IRARIHNLAAWIKENNPDIICLQET--------KTEDKNFPFETLQSL------NYHIET 59 +++ I I + PD +QE + + L NY Sbjct: 93 VKSAIQEDIRLINKEKPDFGNIQEIDWQGDRSQQVNEPQMVRAGLPDYTSVLTQNYDSAY 152 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-TQTLRIGNLYLPHGNP 118 + + + + + L + + + Sbjct: 153 LFYPVTKPIGKAKSGIMTYSKYEIESSTRYKLPIETNFNKFFDLDRAFSVSILPIKNSDK 212 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 ++I Q L L + + + + A Sbjct: 213 KFVIFNTHLSAFITDQKIQKQQLLTLFDEMK----KYVSKGDYVICGADYNHALAGKAHP 268 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWD----YYADSWSKNKGIRIDHIMLSPEATS 234 ++ T +R T+ + Y + GI ID ++S Sbjct: 269 ELTWMKEFPTENLTKGMRVVAPTNAP-TVRSLDYAYDKKNPKNTFGI-IDGFLVSNNIKD 326 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 L ID + K SDH PV++ + Sbjct: 327 -LKIQTIDNQ----FKSSDHQPVVMDFSL 350 >gi|198401906|gb|ACH87585.1| hypothetical protein [Dunaliella viridis] Length = 2229 Score = 38.6 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 7/42 (16%) Query: 4 VTVA--TWNVNSIRARIHNLAAWI---KENNPDIIC--LQET 38 + V +WNVN R ++ W+ + DI+C LQE Sbjct: 1273 LRVVVGSWNVNVTRPSQRSMYEWLGCHAADGADIVCVGLQEV 1314 >gi|255077378|ref|XP_002502331.1| predicted protein [Micromonas sp. RCC299] gi|226517596|gb|ACO63589.1| predicted protein [Micromonas sp. RCC299] Length = 328 Score = 38.6 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 21/48 (43%), Gaps = 9/48 (18%) Query: 223 IDHIMLSPEATSLLHSA-------RIDTKPRGWTKPSDHTPVIVSLDI 263 ID++ + + SA + T T+ SDH P+ V L++ Sbjct: 280 IDYVFVDDGVA--VRSAMPLPGRDEVATGLPDATRGSDHLPLTVDLEL 325 >gi|218187613|gb|EEC70040.1| hypothetical protein OsI_00627 [Oryza sativa Indica Group] Length = 1499 Score = 38.6 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 23/152 (15%), Positives = 50/152 (32%), Gaps = 10/152 (6%) Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + I D+ R + E ++ I + + N+A Sbjct: 551 YNFRYIDVLIKDESCPVQWRCTFVYGEPKASERHNMWTLLRRIKSNSAAPWCLVGDFNEA 610 Query: 174 CFTLEVR--QSFQKLQNMGFTDAIRATHDTHHLYS---F-WDYYADSWSKNKGIRIDHIM 227 + E ++ Q M F + + ++ + +D N +R+D + Sbjct: 611 MWQFEHFSDHKRREKQIMDFREVLSHCDVFDLGFTGAPWTFDNKQKGR-NNVQVRLDRTV 669 Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 S +SL +A + SDH+P+++ Sbjct: 670 ASQSWSSLFPAAEV---IHLTVSSSDHSPILL 698 >gi|218186460|gb|EEC68887.1| hypothetical protein OsI_37529 [Oryza sativa Indica Group] Length = 1765 Score = 38.6 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 22/175 (12%), Positives = 56/175 (32%), Gaps = 14/175 (8%) Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 + L P + ++ R S + + I + + Sbjct: 561 YVQLSPEEPQWHVTFVYGEPRVENRHRMWSLLRTIHQSSSLPWAV-IGDFNETMWQFEHF 619 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 +++ LQ+ D +D + W +N +R+D ++ Sbjct: 620 SRTPRGEPQMQDFRDVLQDCELHDLGFKGVPHT-----YDNKREGW-RNVKVRLDRVVAD 673 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTS----QNMKP 280 + + +A++ + SDH P++++L + +P + +Q +P Sbjct: 674 DKWRDIYSTAQVVHLV---SPCSDHCPILLNLVVKDPHQLRQKCLHYEIVWEREP 725 >gi|189242004|ref|XP_001807057.1| PREDICTED: hypothetical protein, partial [Tribolium castaneum] Length = 765 Score = 38.6 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 9/165 (5%), Positives = 29/165 (17%) Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 +++ + +G + + + Sbjct: 433 YDWNWYWHWNRFNSGYNWYRINFNFWSFNFRKWYWFYSGYNWYWVNLNLWRFDFWKRYWF 492 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 + +D S + R +N + + Sbjct: 493 NSWYDWNWYRNWDRFHSRYNWKWYGFNTRYNWNWVNFDFWSFNFRKWYWFYSGYNWYWVN 552 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK 217 + + R H Y++ Y ++ Sbjct: 553 LNLWRFDFWKRYWFNSWYDWNWYRNWDRFHSRYNWKWYGFNTRYN 597 Score = 37.1 bits (84), Expect = 3.0, Method: Composition-based stats. Identities = 6/165 (3%), Positives = 25/165 (15%) Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 +++ + ++ + + F + Sbjct: 359 YDWNWYRNWDRFHSRYNWKWYGFNTGYNWNWVNFNFWSFNFRKWYWFYSRYNWYWVNFNL 418 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 + +N + + Sbjct: 419 WRFDFWKRYWFNSWYDWNWYWHWNRFNSGYNWYRINFNFWSFNFRKWYWFYSGYNWYWVN 478 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK 217 + + R H Y++ Y ++ Sbjct: 479 LNLWRFDFWKRYWFNSWYDWNWYRNWDRFHSRYNWKWYGFNTRYN 523 Score = 37.1 bits (84), Expect = 3.1, Method: Composition-based stats. Identities = 8/160 (5%), Positives = 27/160 (16%) Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 G + + + N + Y + Sbjct: 153 FWKGYWFNSWYDWNWYRNWDRFHSRYNWKWYGFNTGYNWNWVNFNFWSFNFRKWYWFYSR 212 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + + + + + +N + + Sbjct: 213 YNWYWVNFNLWRFDFWKRYWFNSWYDWNWINFNFWSFNFRKWYWFYSGYNWYWVNLNLWR 272 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK 217 + + R H Y++ Y ++ Sbjct: 273 FDFWKRYWFNSWYDWNWYRNWDRFHSRYNWKWYGFNTRYN 312 >gi|156344708|ref|XP_001621283.1| hypothetical protein NEMVEDRAFT_v1g248701 [Nematostella vectensis] gi|156207057|gb|EDO29183.1| predicted protein [Nematostella vectensis] Length = 492 Score = 38.6 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 34/216 (15%), Positives = 66/216 (30%), Gaps = 26/216 (12%) Query: 81 THLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQ 140 A + E + + N + I + W +A Sbjct: 164 FCFINSHFAAHAEYTEYRNSDGLCVYVVSNYKTYSWDWIGLYRVGFHHIWDYEMYEWAVG 223 Query: 141 RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHD 200 + A ++ +P+ Y + + V ++F+ LQ+ + + Sbjct: 224 DGDEYGENGCAVLFDCLPEEPGHYVMAYYSYKMEAIISVSEAFELLQSKDAKLSFIDFKE 283 Query: 201 THHLY--SF--------WD-----YYADSWSKNKGIRIDHIMLSPEATSLLHSAR-IDTK 244 ++ ++ WD Y +W+ R E +A+ I K Sbjct: 284 GPLVFKPTYKYNPGSSDWDTESGKYRKPAWTDRVLWR--------EKPEKADTAQLITYK 335 Query: 245 PRGWTKPSDHTPV--IVSLDIPEPRKKQQDSTSQNM 278 SDH PV ++SLD+P+ K +D M Sbjct: 336 SHDQYMTSDHRPVSALLSLDLPDSALKIEDPIDWKM 371 >gi|15672926|ref|NP_267100.1| hypothetical protein L169897 [Lactococcus lactis subsp. lactis Il1403] gi|12723881|gb|AAK05042.1|AE006329_1 unknown protein [Lactococcus lactis subsp. lactis Il1403] Length = 352 Score = 38.6 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 33/269 (12%), Positives = 66/269 (24%), Gaps = 30/269 (11%) Query: 14 IRARIHNLAAWIKENNPDIICLQET--------KTEDKNFPFETLQSL------NYHIET 59 +++ I I + PD +QE + + L NY Sbjct: 93 VKSAIQEDIRLINKEKPDFGNIQEIDWQGDRSQQVNEPQMVRAGLPDYTSVLTQNYDSAY 152 Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-TQTLRIGNLYLPHGNP 118 + + + + + L + + + Sbjct: 153 LFYPVTKPIGKAKSGIMTYSKYEIESSTRYKLPIETNFNKFFDLDRAFSVSILPIKNSDK 212 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 ++I Q L L + + + + A Sbjct: 213 KFVIFNTHLSAFITDQKIQKQQLLTLFDEMK----KYVSKGDYVICGADYNHALAGKAHP 268 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWD----YYADSWSKNKGIRIDHIMLSPEATS 234 ++ T +R T+ + Y + GI ID ++S Sbjct: 269 ELTWMKEFPTENLTKGMRVVAPTNAP-TVRSLDYAYDKKNPKNTFGI-IDGFLVSNNIKD 326 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 L ID + K SDH PV++ + Sbjct: 327 -LKIQTIDNQ----FKSSDHQPVVMDFSL 350 >gi|331237187|ref|XP_003331251.1| hypothetical protein PGTG_13214 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] gi|309310241|gb|EFP86832.1| hypothetical protein PGTG_13214 [Puccinia graminis f. sp. tritici CRL 75-36-700-3] Length = 710 Score = 38.6 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 8/50 (16%), Positives = 17/50 (34%), Gaps = 4/50 (8%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQD 272 ID ++ + + + SDH P+ ++L + E Sbjct: 370 IDLCWVNTHCKPRIRECSVALE----NHASDHQPIRLTLSLTEALLDPPP 415 >gi|4522005|gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1715 Score = 38.6 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 32/268 (11%), Positives = 76/268 (28%), Gaps = 45/268 (16%) Query: 2 SVVTVATWNVNSI------RARIHNLAA--WIKENNPDIICLQETKTEDKNFPFETLQSL 53 S + V WN + R R+ + ++ D++ L ETK + N+ + + Sbjct: 361 SPMRVGFWNCQGLGQPLTVR-RLEEVQRVYFL-----DMLFLIETK-QQDNYTRDLGVKM 413 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 + LS + HL + R ++ + +Y Sbjct: 414 GFEDMCIISP-----RGLSGGLVVYWKKHLSIQVISHDVRLVDLYVEYKNFNFYLSCIYG 468 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + + P + GD+N I ++ + Sbjct: 469 H----------PIPSERHHLWEKLQRVSAHRSGPWMMCGDFNEILNLNEKKGGRRRSIGS 518 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233 + ++++ + YS+ + + +D + ++ + Sbjct: 519 LQNFTNMINCCNMKDLKS---------KGNPYSWVGKRQN---ETIESCLDRVFINSDWQ 566 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + + SDH PVI+ + Sbjct: 567 ASFPAFE---TEFLPIAGSDHAPVIIDI 591 >gi|85703791|ref|ZP_01034895.1| endonuclease/exonuclease/phosphatase family protein [Roseovarius sp. 217] gi|85672719|gb|EAQ27576.1| endonuclease/exonuclease/phosphatase family protein [Roseovarius sp. 217] Length = 126 Score = 38.6 bits (88), Expect = 1.1, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 21/53 (39%), Gaps = 12/53 (22%) Query: 223 IDHIMLSPEATSL---------LHS--ARIDTKPR-GWTKPSDHTPVIVSLDI 263 +D+I++SP+ + + R SDH PV + L++ Sbjct: 74 LDYILISPDLMARRPVWRIWHPFDDPGCWDNRDLREALLAASDHFPVTLDLEL 126 >gi|157417476|gb|ABV54895.1| exodeoxyribonuclease-like protein [Streptomyces pristinaespiralis] Length = 144 Score = 38.2 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 12/67 (17%), Positives = 24/67 (35%), Gaps = 2/67 (2%) Query: 145 EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA--THDTH 202 ++ GD+NI D N ++ F E R+ ++ + + D Sbjct: 78 GREVVVCGDWNIAHHEADLKNWKSNRKNSGFLPEEREWLGRVFSEAEYVDVVRDLHPDQE 137 Query: 203 HLYSFWD 209 Y++W Sbjct: 138 GPYTWWS 144 >gi|8615|emb|CAA37910.1| slit protein [Drosophila melanogaster] Length = 1480 Score = 38.2 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 12/160 (7%), Positives = 37/160 (23%), Gaps = 2/160 (1%) Query: 34 CLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR 93 CL E K ++ + ++S + + I + Sbjct: 989 CLGEIKCQNNATCIDGVESYKCECQPGFSGEFCDTKIQFCSPEFNPCANGAKCMDHFTHY 1048 Query: 94 FIEATFTINTQTLR--IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFA 151 + + I + + + + + E + Sbjct: 1049 SCDCQAGFHGTNCTDNIDDCQNHMCQNGGTCVDGINDYQCRCPDDYTGKYCEGHNMISMM 1108 Query: 152 GDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191 Q H+C + + ++ +A + + + Sbjct: 1109 YPQTSPCQNHECKHGVCFQPNAQGSDYLCRCHPGYTGKWC 1148 >gi|332194059|gb|AEE32180.1| Type I inositol-1,4,5-trisphosphate 5-phosphatase 11 [Arabidopsis thaliana] Length = 271 Score = 38.2 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 5/46 (10%) Query: 4 VTVATWNVNSIRARIHNLAAWI-KENNPD--IICLQET-KTEDKNF 45 + + TWN+N +L + KE D ++ LQE K Sbjct: 56 IRIITWNMNG-NVSYEDLVELVGKERKFDLLVVGLQEAPKANVDQL 100 >gi|324995051|gb|EGC26964.1| RgfB protein [Streptococcus sanguinis SK678] gi|327462906|gb|EGF09227.1| RgfB protein [Streptococcus sanguinis SK1] Length = 271 Score = 38.2 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 28/244 (11%), Positives = 65/244 (26%), Gaps = 9/244 (3%) Query: 18 IHNLAAWIKENNPDIICLQETK--TEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75 ++ LA I + D+ICLQE TE + Q + + + Sbjct: 21 LNELAERILQEKYDVICLQEVNQLTESEQVVQAPFYQAVEGAIEIHQDHFALCLVEKLAE 80 Query: 76 PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135 + + E ++ + L + + N + Sbjct: 81 AGLDYHWSWAYNHIGFDIYNEGVAILSRKPLTPREVLVSEANDPRDYHTRKVLLAETEVD 140 Query: 136 RF---ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN--MG 190 + F G++ + + + +Q +Q + + Sbjct: 141 GQLLTIASCHLSWWDKGFQGEWAKLEEELLKAETPLVLMGDFNNPVGQQGYQTILASPLK 200 Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250 D+ A + + A ++ID++ S + + + + Sbjct: 201 LQDSHTAAKEAIGEATVEGTIAGWDDNKHALKIDYVFTSQGMD--VERSAVVFDGKETPV 258 Query: 251 PSDH 254 SDH Sbjct: 259 VSDH 262 >gi|323450990|gb|EGB06869.1| hypothetical protein AURANDRAFT_71920 [Aureococcus anophagefferens] Length = 556 Score = 38.2 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 7/45 (15%) Query: 15 RARIHNLAAWIKENNPDIICLQETKTEDKNFPFE---TLQSLNYH 56 RAR+ + + + N D+ICLQE + +F + ++S Y Sbjct: 256 RARV--VIQELIDTNADVICLQE--AQRDHFERDVEPAMKSAGYE 296 >gi|290960579|ref|YP_003491761.1| hydrolase [Streptomyces scabiei 87.22] gi|260650105|emb|CBG73221.1| putative hydrolase [Streptomyces scabiei 87.22] Length = 371 Score = 38.2 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 10/55 (18%), Positives = 21/55 (38%), Gaps = 14/55 (25%) Query: 223 IDHIMLSPEATSLLHSARIDT----KPR----------GWTKPSDHTPVIVSLDI 263 +D+++ PE + + ++ PR + SDH + LD+ Sbjct: 317 LDYLLFGPELWERVTNVGVERRGIWAPRTFPSFDTVTSKADQASDHAALFADLDV 371 >gi|169787478|gb|ACA80178.1| putative DNA lyase [Colletotrichum cereale] Length = 233 Score = 38.2 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 22/57 (38%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81 + DI+ +QETK + K+ + + + + K G + ++ Y Sbjct: 2 FEILEADIVIMQETKIQRKDLHDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATCC 58 >gi|169787448|gb|ACA80163.1| putative DNA lyase [Colletotrichum cereale] Length = 233 Score = 38.2 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 22/57 (38%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81 + DI+ +QETK + K+ + + + + K G + ++ Y Sbjct: 2 FEILEADIVIMQETKIQRKDLHDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATCC 58 >gi|169787434|gb|ACA80156.1| putative DNA lyase [Colletotrichum cereale] gi|169787472|gb|ACA80175.1| putative DNA lyase [Colletotrichum cereale] gi|169787474|gb|ACA80176.1| putative DNA lyase [Colletotrichum cereale] Length = 233 Score = 38.2 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 22/57 (38%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81 + DI+ +QETK + K+ + + + + K G + ++ Y Sbjct: 2 FEILEADIVIMQETKIQRKDLHDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATCC 58 >gi|169787348|gb|ACA80113.1| putative DNA lyase [Colletotrichum cereale] gi|169787446|gb|ACA80162.1| putative DNA lyase [Colletotrichum cereale] gi|169787462|gb|ACA80170.1| putative DNA lyase [Colletotrichum cereale] gi|169787492|gb|ACA80185.1| putative DNA lyase [Colletotrichum cereale] gi|169787494|gb|ACA80186.1| putative DNA lyase [Colletotrichum cereale] Length = 233 Score = 38.2 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 22/57 (38%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81 + DI+ +QETK + K+ + + + + K G + ++ Y Sbjct: 2 FEILEADIVIMQETKIQRKDLHDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATCC 58 >gi|169787346|gb|ACA80112.1| putative DNA lyase [Colletotrichum cereale] Length = 233 Score = 38.2 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 22/57 (38%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81 + DI+ +QETK + K+ + + + + K G + ++ Y Sbjct: 2 FEILEADIVIMQETKIQRKDLHDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATCC 58 >gi|169787332|gb|ACA80105.1| putative DNA lyase [Colletotrichum cereale] gi|169787334|gb|ACA80106.1| putative DNA lyase [Colletotrichum cereale] gi|169787336|gb|ACA80107.1| putative DNA lyase [Colletotrichum cereale] gi|169787338|gb|ACA80108.1| putative DNA lyase [Colletotrichum cereale] gi|169787340|gb|ACA80109.1| putative DNA lyase [Colletotrichum cereale] gi|169787342|gb|ACA80110.1| putative DNA lyase [Colletotrichum cereale] gi|169787344|gb|ACA80111.1| putative DNA lyase [Colletotrichum cereale] gi|169787352|gb|ACA80115.1| putative DNA lyase [Colletotrichum cereale] gi|169787410|gb|ACA80144.1| putative DNA lyase [Colletotrichum cereale] gi|169787416|gb|ACA80147.1| putative DNA lyase [Colletotrichum cereale] gi|169787418|gb|ACA80148.1| putative DNA lyase [Colletotrichum cereale] gi|169787438|gb|ACA80158.1| putative DNA lyase [Colletotrichum cereale] gi|169787444|gb|ACA80161.1| putative DNA lyase [Colletotrichum cereale] Length = 233 Score = 38.2 bits (87), Expect = 1.1, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 22/57 (38%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81 + DI+ +QETK + K+ + + + + K G + ++ Y Sbjct: 2 FEILEADIVIMQETKIQRKDLHDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATCC 58 >gi|302851072|ref|XP_002957061.1| hypothetical protein VOLCADRAFT_98156 [Volvox carteri f. nagariensis] gi|300257617|gb|EFJ41863.1| hypothetical protein VOLCADRAFT_98156 [Volvox carteri f. nagariensis] Length = 581 Score = 38.2 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 15/84 (17%), Positives = 24/84 (28%), Gaps = 2/84 (2%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQP 76 R L I E + DIICLQE D+ + L L Y + + + Sbjct: 67 RRPLLLQEILEADADIICLQELNHFDEL--DQVLSGLGYEGAFREKHASPALKYEYPPDG 124 Query: 77 IEIVTHLPGDDLDVQARFIEATFT 100 + + + Sbjct: 125 MAVFYRRSRFRCCPNGVEGRSFHD 148 >gi|294667784|ref|ZP_06732994.1| extracellular nuclease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292602410|gb|EFF45851.1| extracellular nuclease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 572 Score = 38.2 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 22/56 (39%), Gaps = 14/56 (25%) Query: 222 RIDHIMLSPEATSLLHSA---RIDTKPR-----------GWTKPSDHTPVIVSLDI 263 R+DH +LSP L A I+ G + SDH PV++ + Sbjct: 517 RLDHALLSPAMAKQLRGAAEWHINADVMDAAGYAKRNLPGPWRSSDHDPVLLGFSL 572 >gi|294627485|ref|ZP_06706068.1| extracellular nuclease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292598116|gb|EFF42270.1| extracellular nuclease [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 572 Score = 38.2 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 22/56 (39%), Gaps = 14/56 (25%) Query: 222 RIDHIMLSPEATSLLHSA---RIDTKPR-----------GWTKPSDHTPVIVSLDI 263 R+DH +LSP L A I+ G + SDH PV++ + Sbjct: 517 RLDHALLSPAMAKQLRGAAEWHINADVMDAAGYAKRNLPGPWRSSDHDPVLLGFSL 572 >gi|289664940|ref|ZP_06486521.1| nuclease [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 572 Score = 38.2 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 22/56 (39%), Gaps = 14/56 (25%) Query: 222 RIDHIMLSPEATSLLHSA---RIDTKPR-----------GWTKPSDHTPVIVSLDI 263 R+DH +LSP L A I+ G + SDH PV++ + Sbjct: 517 RLDHALLSPAMAKQLRGAAEWHINADVMDAAGYAKRNLPGPWRSSDHDPVLLGFSL 572 >gi|194756234|ref|XP_001960384.1| GF13339 [Drosophila ananassae] gi|190621682|gb|EDV37206.1| GF13339 [Drosophila ananassae] Length = 1502 Score = 38.2 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 11/160 (6%), Positives = 38/160 (23%), Gaps = 2/160 (1%) Query: 34 CLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR 93 CL E K ++ + ++S + + + I + Sbjct: 1010 CLGEIKCQNNATCVDGVESYHCECQPGFTGEFCDTKIQFCSAEFNPCQNGAKCLDHFTHY 1069 Query: 94 FIEATFTINTQTLR--IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFA 151 + + + + + + + + E + Sbjct: 1070 SCDCQAGFHGTNCTDNVDDCQNHMCQNGGTCVDGINDYVCRCPDDYTGKYCEGHNMISMM 1129 Query: 152 GDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191 Q H+C + + ++ +A + + + Sbjct: 1130 YPQTSPCQNHECKHGVCFQPNAQGSDYLCRCHPGYTGKWC 1169 >gi|78045838|ref|YP_362013.1| putative extracellular nuclease [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78034268|emb|CAJ21913.1| putative extracellular nuclease [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 572 Score = 38.2 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 22/56 (39%), Gaps = 14/56 (25%) Query: 222 RIDHIMLSPEATSLLHSA---RIDTKPR-----------GWTKPSDHTPVIVSLDI 263 R+DH +LSP L A I+ G + SDH PV++ + Sbjct: 517 RLDHALLSPAMAKQLRGAAEWHINADVMDDAGYAKRNLPGPWRSSDHDPVLLGFSL 572 >gi|308153331|gb|ADO14992.1| RT09975p [Drosophila melanogaster] Length = 1444 Score = 38.2 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 12/160 (7%), Positives = 37/160 (23%), Gaps = 2/160 (1%) Query: 34 CLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR 93 CL E K ++ + ++S + + I + Sbjct: 953 CLGEIKCQNNATCIDGVESYKCECQPGFSGEFCDTKIQFCSPEFNPCANGAKCMDHFTHY 1012 Query: 94 FIEATFTINTQTLR--IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFA 151 + + I + + + + + E + Sbjct: 1013 SCDCQAGFHGTNCTDNIDDCQNHMCQNGGTCVDGINDYQCRCPDDYTGKYCEGHNMISMM 1072 Query: 152 GDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191 Q H+C + + ++ +A + + + Sbjct: 1073 YPQTSPCQNHECKHGVCFQPNAQGSDYLCRCHPGYTGKWC 1112 >gi|198461203|ref|XP_001361946.2| GA21014 [Drosophila pseudoobscura pseudoobscura] gi|198137269|gb|EAL26525.2| GA21014 [Drosophila pseudoobscura pseudoobscura] Length = 1527 Score = 38.2 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 16/160 (10%), Positives = 38/160 (23%), Gaps = 2/160 (1%) Query: 34 CLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR 93 CL ETK ++ + ++S + + I + Sbjct: 1036 CLGETKCQNNATCIDGVESYRCECQPGFSGEFCDTKIQFCSPEFNPCANGAKCVDHFTHY 1095 Query: 94 FIEATFTINTQTLR--IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFA 151 E + I + + K F + E + Sbjct: 1096 SCECQAGFHGTNCTDNIDDCQNHMCQNGGTCIDGINDYVCKCPDDFTGKYCEGHNMISMM 1155 Query: 152 GDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191 Q H+C + + ++ +A + + + Sbjct: 1156 YPQTSPCQNHECKHGVCFQPNAAGSDYLCKCHPGYTGKWC 1195 >gi|307095198|gb|ADN29905.1| salivary inositol polyphosphate 5-phosphatase [Triatoma matogrossensis] Length = 316 Score = 38.2 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 39/297 (13%), Positives = 73/297 (24%), Gaps = 56/297 (18%) Query: 3 VVTVATWNVNSIR-ARIHNLAAWIKENN---PD--IICLQETKTEDKNFPF--------- 47 + V TWNVN+ R + L +++ + PD I+ LQE + Sbjct: 30 TMHVVTWNVNAERPTCLVKLLGQLQQRDEDEPDMVIVGLQEVTMSLGSALKNYFLGDRWT 89 Query: 48 ----ETLQSLNY---------------HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDL 88 + L+S +Y +++ S V + G + Sbjct: 90 ASIEDILESNDYVKVETASMFGMLLNVYVKIQHSWSVADVDVAHVETDYFRYYGNKGGVI 149 Query: 89 DVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPL 148 + +N + ++ + L Sbjct: 150 MKFRLYGRLFCIVNAH----FHALNKTTRFEDYKTFNKTRTEFCENPSDYIFFLGDLNFR 205 Query: 149 IFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFW 208 I + PQ + + E+ +K + + + Y Sbjct: 206 IRKTEKFNTPQKINKLIEAKKYEELLKQDELLYYQKKKEIFEDFTELPINFPPTYKYLLK 265 Query: 209 DYYADSWSKNKGIRIDHIMLSPEATSLLHS--------ARIDTKPRGWTKPSDHTPV 257 Y N R P T + I+ + SDH PV Sbjct: 266 RYK---RDYNLKRR-------PAWTDRILYKTETDRPITPINYDAMEDHRKSDHFPV 312 >gi|147773617|emb|CAN65417.1| hypothetical protein VITISV_026739 [Vitis vinifera] Length = 226 Score = 38.2 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 12/26 (46%), Positives = 18/26 (69%) Query: 17 RIHNLAAWIKENNPDIICLQETKTED 42 R + A IK+N D++CLQETK ++ Sbjct: 96 RRKVIKALIKKNMVDLVCLQETKIQE 121 >gi|38346596|emb|CAE04660.2| OSJNBa0061G20.16 [Oryza sativa Japonica Group] Length = 1285 Score = 38.2 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 21/190 (11%), Positives = 54/190 (28%), Gaps = 11/190 (5%) Query: 97 ATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI 156 + ++ N S+ R + L + Sbjct: 618 YWDESVSVDVKDINKRYIDAYVRLSSDEPQWHITFVYGEPRVENRHRMWSLLRTIRQSSA 677 Query: 157 IPQPH--DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADS 214 +P D + Q ++ + ++ +++ D D Sbjct: 678 LPWMVIGDFNETLWQFEHFSKNPRCETQMQNFRDALYDCDLQDLGFKGVPHTY-DNRRDG 736 Query: 215 WSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDST 274 W +N +R+D + + L A++ + SDH+P+++ + + + +Q Sbjct: 737 W-RNVKVRLDRAVADDKWRDLFPEAQVSHLV---SPCSDHSPILLEFIVKDTTRPRQKCL 792 Query: 275 S----QNMKP 280 +P Sbjct: 793 HYEIVWEREP 802 >gi|167627082|ref|YP_001677582.1| hypothetical protein Fphi_0858 [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|241667644|ref|ZP_04755222.1| hypothetical protein FphipA2_02660 [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876189|ref|ZP_05248899.1| endonuclease/exonuclease/phosphatase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|167597083|gb|ABZ87081.1| endonuclease/exonuclease/phosphatase family [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|254842210|gb|EET20624.1| endonuclease/exonuclease/phosphatase [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 239 Score = 38.2 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 43/247 (17%), Positives = 77/247 (31%), Gaps = 48/247 (19%) Query: 21 LAAWIK----ENNPDIICLQE-TKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75 A+I+ +N DI CLQE D FP + +N+ + GVA +S + Sbjct: 32 FKAYIRHTYFNHNIDIFCLQEAVHQHDTKFPIDKF-DINFASNIVLRSHNYGVATVSHFP 90 Query: 76 PIEIVTHLPGDDLDVQARFIEATFTINTQT-LRIGNLYLPHGNPITSTKYDDKISWIKRF 134 I+ V L V + T ++ + + N ++ Y+ + IK + Sbjct: 91 VIKNVKILTTHRESVINTHKASLITHLNIDGTKVVVVNIHAINFKSNKVYEYEFEKIKEY 150 Query: 135 LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDA 194 + + + II + +N + F E + + Sbjct: 151 ISPEKYKHPI-----------IIAGDFNTWNRRRVKLIKDFCREFSFKVAFIDEPQLVKS 199 Query: 195 IRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDH 254 ++ H LY +G+ L A + K SDH Sbjct: 200 FQSNHLDFVLY-------------RGL-------------NLEKASVLD----CKKISDH 229 Query: 255 TPVIVSL 261 P+I Sbjct: 230 NPIIAEF 236 >gi|115694558|ref|XP_786460.2| PREDICTED: similar to ependymin-related protein precursor [Strongylocentrotus purpuratus] gi|115971257|ref|XP_001185599.1| PREDICTED: similar to ependymin-related protein precursor [Strongylocentrotus purpuratus] Length = 605 Score = 38.2 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 1/38 (2%) Query: 3 VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETK 39 V+++ + N+ + A+ LA N DI+C+QET Sbjct: 48 VLSIISSNIEGLSGAKQELLADLCITTNCDILCIQETH 85 >gi|70932240|ref|XP_737670.1| hypothetical protein [Plasmodium chabaudi chabaudi] gi|56513249|emb|CAH80745.1| hypothetical protein PC000205.04.0 [Plasmodium chabaudi chabaudi] Length = 148 Score = 38.2 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 26/76 (34%), Gaps = 14/76 (18%) Query: 195 IRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK---- 250 A Y+ W+ N +D+I LSPE +D G K Sbjct: 80 YSAYKKVDIPYTNWN-------NNFIDVLDYIFLSPELKVKRLLKGVDKHLFGQYKGIVT 132 Query: 251 ---PSDHTPVIVSLDI 263 PSDH + +++ Sbjct: 133 PFNPSDHLSIAAEIEL 148 >gi|222616780|gb|EEE52912.1| hypothetical protein OsJ_35521 [Oryza sativa Japonica Group] Length = 1003 Score = 38.2 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 21/135 (15%), Positives = 44/135 (32%), Gaps = 8/135 (5%) Query: 130 WIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR----QSFQK 185 R + E ++ I P + + N+A + E + ++ Sbjct: 176 MQWRCTFVYGEPKAHERHNMWTLLRRIKPNSTAPWCLMGDFNEAMWQFEHFSEHKRKEKQ 235 Query: 186 LQNMGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLLHSARIDTK 244 + + + D + + W Y N +R+D + S + L A++ Sbjct: 236 MLDFREILSHCDVFDLGFIGTPWTYDNKRKGGYNVRVRLDRAVASQSWSVLYPQAQVRHL 295 Query: 245 PRGWTKPSDHTPVIV 259 SDH P++V Sbjct: 296 VSSR---SDHCPILV 307 >gi|56697332|ref|YP_167698.1| endonuclease/exonuclease/phosphatase family protein [Ruegeria pomeroyi DSS-3] gi|56679069|gb|AAV95735.1| endonuclease/exonuclease/phosphatase family protein [Ruegeria pomeroyi DSS-3] Length = 233 Score = 38.2 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 35/272 (12%), Positives = 68/272 (25%), Gaps = 60/272 (22%) Query: 3 VVTVATWNVN---SI--RARIHNLAAWIKENNPDIICLQET--KTED--KNFPFETLQSL 53 + +A++N+ + R + + + I LQE + P L+ Sbjct: 5 TLRLASYNIQKCVGLDLRRQPRRILQVLDAMGARIAVLQEADKRLPPRPAALPHFVLEEA 64 Query: 54 NYHIETCGQKS----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 + + G + I ++ + + F LR+ Sbjct: 65 GWQVVDLGGAGSLGWHGNAVIWKGAGITQLASAHHDLPGFEPRGAVRVEFDTPIGPLRVL 124 Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169 L+L ++ + A D +P + Sbjct: 125 GLHLGL-----------------------LPASRRDQIVHLAHDLERLPPMPTVWAGDFN 161 Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 E + L+ + + A +D I S Sbjct: 162 EWS--RQPVLDHLAPMLRFLPARPSFPAPRPLGA-------------------LDRIAHS 200 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 PE +++ H R SDH PV L Sbjct: 201 PELSAVAHGVF---AERPAPIASDHLPVWADL 229 >gi|222629449|gb|EEE61581.1| hypothetical protein OsJ_15963 [Oryza sativa Japonica Group] Length = 1494 Score = 38.2 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 22/163 (13%), Positives = 45/163 (27%), Gaps = 6/163 (3%) Query: 101 INTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP 160 ++L++ + + W F+ + E + Sbjct: 317 FWDESLKVELKSYNMRHIDVIITEPEGARWTATFVYGEPKAQNRHEMWNLLRRIRLNASD 376 Query: 161 HDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF--WDYYAD-SWSK 217 E R + Q F + + + W Y + + Sbjct: 377 PWLMIGDFNEAMWQIEHRSRVKHSERQMRDFREVLVECDLQDIGFQGVPWTYDNNQASPN 436 Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 N +R+D + SP ++ A I T SDH P+++ Sbjct: 437 NVKVRLDRAVASPVWRAMFDQANIMH---LTTACSDHVPLLLE 476 >gi|17136482|ref|NP_476728.1| slit, isoform A [Drosophila melanogaster] gi|161077130|ref|NP_001097333.1| slit, isoform D [Drosophila melanogaster] gi|7303029|gb|AAF58098.1| slit, isoform A [Drosophila melanogaster] gi|157400353|gb|ABV53816.1| slit, isoform D [Drosophila melanogaster] Length = 1480 Score = 38.2 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 12/160 (7%), Positives = 37/160 (23%), Gaps = 2/160 (1%) Query: 34 CLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR 93 CL E K ++ + ++S + + I + Sbjct: 989 CLGEIKCQNNATCIDGVESYKCECQPGFSGEFCDTKIQFCSPEFNPCANGAKCMDHFTHY 1048 Query: 94 FIEATFTINTQTLR--IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFA 151 + + I + + + + + E + Sbjct: 1049 SCDCQAGFHGTNCTDNIDDCQNHMCQNGGTCVDGINDYQCRCPDDYTGKYCEGHNMISMM 1108 Query: 152 GDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191 Q H+C + + ++ +A + + + Sbjct: 1109 YPQTSPCQNHECKHGVCFQPNAQGSDYLCRCHPGYTGKWC 1148 >gi|86143416|ref|ZP_01061818.1| hypothetical protein MED217_09540 [Leeuwenhoekiella blandensis MED217] gi|85830321|gb|EAQ48781.1| hypothetical protein MED217_09540 [Leeuwenhoekiella blandensis MED217] Length = 193 Score = 38.2 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 20/44 (45%), Gaps = 9/44 (20%) Query: 221 IRIDHIMLSPEAT-SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +RID I+ PE + ++ SDH P++ L++ Sbjct: 158 LRIDFILTDPEFKTQAFQNFDVEY--------SDHFPIMAVLEL 193 >gi|312881196|ref|ZP_07740994.1| putative phospholipase C precursor [Vibrio caribbenthicus ATCC BAA-2122] gi|309371088|gb|EFP98542.1| putative phospholipase C precursor [Vibrio caribbenthicus ATCC BAA-2122] Length = 431 Score = 38.2 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 40/280 (14%), Positives = 82/280 (29%), Gaps = 35/280 (12%) Query: 4 VTVATWNVNSI---------RARIHNLAAWIKEN--NPDIICLQETK--TEDKNFPFETL 50 + + T+N + RAR +I E D++ LQE + F Sbjct: 166 LRMMTYNTWMLPYIGQERDTRAR------YIAEAVKGYDVVFLQEVFDLGNEDTINFLMS 219 Query: 51 QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 + Y E N ++T+ E + + Sbjct: 220 EEYVYRSEKLTANDSNTFDGG-------VLTYSKYPIEFQDQLVFEHCTGTDCSGDKGAV 272 Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170 + + ++ + ++ +L E +F I Sbjct: 273 YTKINHSGKAYHLFNIHLGAWNGDQHRQTRMAQLGELRVFISAQQIAEHEPVIVGGDFNI 332 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY-SFWDYYADSWSKNKGIRIDHIML- 228 D E Q ++ + + Y + + DS + ++ R+D+++L Sbjct: 333 -DREHYPEDFQQMLRILDAYDPGESSPFRYSSDPYLNHFSLNNDSTAIDR-ERLDYVLLL 390 Query: 229 -SPEATSLLHSA---RIDTKPR-GWTKPSDHTPVIVSLDI 263 S ++S R+ T G + SDH V ++I Sbjct: 391 KSTSPKRYINSVLPRRVFTSELWGKWELSDHFAVEALIEI 430 >gi|296876028|ref|ZP_06900084.1| endonuclease/exonuclease/phosphatase [Streptococcus parasanguinis ATCC 15912] gi|296432939|gb|EFH18730.1| endonuclease/exonuclease/phosphatase [Streptococcus parasanguinis ATCC 15912] Length = 770 Score = 38.2 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 30/88 (34%), Gaps = 10/88 (11%) Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT--- 249 + HD YS++ Y + +D+I +S + + Sbjct: 590 TNLMDQHDAGDRYSYF-YRGSNQV------LDNIFISNNMAAKARFEPVHINASFMKEHG 642 Query: 250 KPSDHTPVIVSLDIPEPRKKQQDSTSQN 277 + SDH PV+V ++ + + Q Sbjct: 643 RASDHDPVLVQIEFSGAQTSGTPTDDQQ 670 >gi|289580690|ref|YP_003479156.1| endonuclease/exonuclease/phosphatase [Natrialba magadii ATCC 43099] gi|289530243|gb|ADD04594.1| Endonuclease/exonuclease/phosphatase [Natrialba magadii ATCC 43099] Length = 261 Score = 38.2 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 18/45 (40%), Gaps = 8/45 (17%) Query: 219 KGIR-IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 G R +D SP + + + SDH P+++ LD Sbjct: 223 VGSRSLDLFCCSPSLD--VGRCDVLD-----VQLSDHRPIVLELD 260 >gi|168061179|ref|XP_001782568.1| predicted protein [Physcomitrella patens subsp. patens] gi|162665975|gb|EDQ52643.1| predicted protein [Physcomitrella patens subsp. patens] Length = 617 Score = 38.2 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%) Query: 17 RIHNLAAWIKENNPDIICLQETKTED-KNFPFETLQSLNY 55 R NL I DI+CLQE +++ ++F L+ Y Sbjct: 293 RRQNLLREIVAYRADILCLQEVQSDHYEDFYAVELEKHGY 332 >gi|119486376|ref|ZP_01620435.1| hypothetical protein L8106_17019 [Lyngbya sp. PCC 8106] gi|119456589|gb|EAW37719.1| hypothetical protein L8106_17019 [Lyngbya sp. PCC 8106] Length = 282 Score = 38.2 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 19/47 (40%), Gaps = 5/47 (10%) Query: 223 IDHIMLSPEATSLLHSARIDTKP-----RGWTKPSDHTPVIVSLDIP 264 +D++ +S A + I + SDH P++ + IP Sbjct: 236 LDYVFVSQMAKKWPCESDILFVQNQVCQKEKEGFSDHYPLMANFSIP 282 >gi|163740897|ref|ZP_02148290.1| endonuclease/exonuclease/phosphatase family protein [Phaeobacter gallaeciensis 2.10] gi|161385888|gb|EDQ10264.1| endonuclease/exonuclease/phosphatase family protein [Phaeobacter gallaeciensis 2.10] Length = 339 Score = 38.2 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 21/53 (39%), Gaps = 12/53 (22%) Query: 223 IDHIMLSPEATSLLHSARI-----------DTKPR-GWTKPSDHTPVIVSLDI 263 +D+IM+S S RI D R SDH PV + LD+ Sbjct: 286 LDYIMVSSGLRQPAASWRIWHPFEDAACYEDVALREALLAASDHFPVSLDLDL 338 >gi|17136484|ref|NP_476729.1| slit, isoform B [Drosophila melanogaster] gi|21645372|gb|AAM70966.1| slit, isoform B [Drosophila melanogaster] Length = 1469 Score = 38.2 bits (87), Expect = 1.2, Method: Composition-based stats. Identities = 12/160 (7%), Positives = 37/160 (23%), Gaps = 2/160 (1%) Query: 34 CLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR 93 CL E K ++ + ++S + + I + Sbjct: 989 CLGEIKCQNNATCIDGVESYKCECQPGFSGEFCDTKIQFCSPEFNPCANGAKCMDHFTHY 1048 Query: 94 FIEATFTINTQTLR--IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFA 151 + + I + + + + + E + Sbjct: 1049 SCDCQAGFHGTNCTDNIDDCQNHMCQNGGTCVDGINDYQCRCPDDYTGKYCEGHNMISMM 1108 Query: 152 GDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191 Q H+C + + ++ +A + + + Sbjct: 1109 YPQTSPCQNHECKHGVCFQPNAQGSDYLCRCHPGYTGKWC 1148 >gi|147795054|emb|CAN60861.1| hypothetical protein VITISV_009889 [Vitis vinifera] Length = 1300 Score = 38.2 bits (87), Expect = 1.3, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 20/41 (48%), Gaps = 2/41 (4%) Query: 3 VVTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTE 41 ++ + +WNV ++ + A + D+ CL ETK + Sbjct: 550 LLRLLSWNVRGANDSSKRKVIKAMXRNQKVDLFCLXETKIQ 590 >gi|126727467|ref|ZP_01743301.1| Endonuclease/exonuclease/phosphatase [Rhodobacterales bacterium HTCC2150] gi|126703247|gb|EBA02346.1| Endonuclease/exonuclease/phosphatase [Rhodobacterales bacterium HTCC2150] Length = 334 Score = 38.2 bits (87), Expect = 1.3, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 21/53 (39%), Gaps = 12/53 (22%) Query: 223 IDHIMLSPEATSLLHSARI-----DTKPRG-------WTKPSDHTPVIVSLDI 263 +D+IM+S + + I D G SDH PV + +DI Sbjct: 282 LDYIMVSSDLKEKNPAWHIWHPFDDPACYGDLNLREALLAASDHFPVTLDIDI 334 >gi|166215964|sp|A2BHJ4|CNO6L_DANRE RecName: Full=CCR4-NOT transcription complex subunit 6-like gi|123230008|emb|CAM16193.1| novel protein similar to vertebrate (CCR4-NOT transcription complex, subunit 6-like) (CNOT6L) (zgc:111987) [Danio rerio] Length = 559 Score = 38.2 bits (87), Expect = 1.3, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 22/56 (39%), Gaps = 5/56 (8%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKN---FPFETLQSLNYHIETCGQKSYNGVA 69 R + I + DII LQE E + F ETL+ Y C + V+ Sbjct: 215 RKKGIMEEITNCDADIISLQEV--ETEQYYTFFLETLKDRGYDGFFCPKSRAKLVS 268 >gi|262047327|ref|ZP_06020284.1| metal-dependent hydrolase [Lactobacillus crispatus MV-3A-US] gi|312977126|ref|ZP_07788874.1| endonuclease/exonuclease/phosphatase family protein [Lactobacillus crispatus CTV-05] gi|260572301|gb|EEX28864.1| metal-dependent hydrolase [Lactobacillus crispatus MV-3A-US] gi|310895557|gb|EFQ44623.1| endonuclease/exonuclease/phosphatase family protein [Lactobacillus crispatus CTV-05] Length = 290 Score = 38.2 bits (87), Expect = 1.3, Method: Composition-based stats. Identities = 33/267 (12%), Positives = 70/267 (26%), Gaps = 29/267 (10%) Query: 19 HNLAAWIKENNPDIICLQE-------------TKTEDKNFPF-ETLQSLNYHIETCGQKS 64 + + +K+ NPD + QE K + +FP ++ + N+H Sbjct: 30 NGVIQTMKKQNPDCMFFQEIDTDSTRSFHVNQVKKVEDDFPKMDSTFASNFHSAFLAVPL 89 Query: 65 YNGVAILSKYQPIEIVTHLP--GDDLDVQARFIEATFTINTQTLRIGNLYLPHGN---PI 119 N + + + F + + + +G I Sbjct: 90 NNPHGTVRSGLLSMSKYKMDSAIRRKYPVSSGPIEKFVDLDRCFVVMRFPVTNGKDLVMI 149 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 S R + +E+ G+Y I+ + E+ Sbjct: 150 NSHMSAYDKGGKMRKAQMKLISSVMEKEYR-RGNYVIVGGDFNHALGKDMMTHFEHQEEI 208 Query: 180 RQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSWSKNKGIRI-DHIMLSPEATSLL 236 L + ++ + K + I D ++S Sbjct: 209 PSWVSVLDQKMLPKDFTMIKAQNRENVATVRATDMKYDPKVNYMTICDGFIVSKNV--QA 266 Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263 + I+T DH PV + ++ Sbjct: 267 KAYNINTHFEYA----DHNPVRLEFEL 289 >gi|241958458|ref|XP_002421948.1| polyprotein of l1-like non-ltr retrotransposon zorro 3, putative [Candida dubliniensis CD36] gi|223645293|emb|CAX39949.1| polyprotein of l1-like non-ltr retrotransposon zorro 3, putative [Candida dubliniensis CD36] Length = 1151 Score = 38.2 bits (87), Expect = 1.3, Method: Composition-based stats. Identities = 28/235 (11%), Positives = 66/235 (28%), Gaps = 18/235 (7%) Query: 18 IHNLAAWIKENN-PDIICLQETK-TEDKNFPF--ETLQSLNYHIETCGQKSYNGVAILSK 73 + I E++ DI +QE + + F + + L+ N + + G I S Sbjct: 30 LDIFLKLIGEHSMIDIWFIQEVRFVSQEQFNYINKILKQHNAQLRMHHFEDLTGFLIHSP 89 Query: 74 Y---QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISW 130 + + I I + + + N YL G+ + + Sbjct: 90 HAKLKFKINDNDNHQTTHFEGCISILDIKLITNEDITLINNYLHSGDMDAQMTLLNAFTK 149 Query: 131 IKRF-LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNM 189 + + + + + P + + + ++ + + K + Sbjct: 150 YIANLKKHNNHNIIYGSDFNHIMSLDDVQLPSNQNSYTFTKKESEIIQLMSRFHNKWKLQ 209 Query: 190 GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK 244 T+ F + R+D I + L R+ T+ Sbjct: 210 DAFQIFNNMRPTN----FHSNKSVKK------RLDRIYIDSRIRRKLKKYRLLTE 254 >gi|118592105|ref|ZP_01549499.1| hypothetical protein SIAM614_25552 [Stappia aggregata IAM 12614] gi|118435401|gb|EAV42048.1| hypothetical protein SIAM614_25552 [Stappia aggregata IAM 12614] Length = 323 Score = 38.2 bits (87), Expect = 1.3, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 10/48 (20%) Query: 4 VTVATWNVNS----------IRARIHNLAAWIKENNPDIICLQETKTE 41 + +AT+N+ S + R+ L I E DI+CLQE + Sbjct: 1 MKLATFNMESFGEDRHDPDALTPRLDALRPKILELEADILCLQEVNAQ 48 >gi|308808454|ref|XP_003081537.1| Glucose-repressible alcohol dehydrogenase transcriptional effector CCR4 and related proteins (ISS) [Ostreococcus tauri] gi|116060002|emb|CAL56061.1| Glucose-repressible alcohol dehydrogenase transcriptional effector CCR4 and related proteins (ISS) [Ostreococcus tauri] Length = 572 Score = 38.2 bits (87), Expect = 1.3, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 20/45 (44%), Gaps = 3/45 (6%) Query: 17 RIHNLAAWIKENNPDIICLQETKTE--DKNFPFETLQSLNYHIET 59 R N+ I N DI+CLQE +++ ++ F E Y Sbjct: 246 RRQNILKEIVNYNADILCLQEVQSDHYEEFFQGEM-AKYGYASVY 289 >gi|145324102|ref|NP_001077640.1| endonuclease/exonuclease/phosphatase family protein [Arabidopsis thaliana] gi|215275244|sp|A8MS41|CCR4D_ARATH RecName: Full=Carbon catabolite repressor protein 4 homolog 4; Short=CCR4 homolog 4 gi|332193244|gb|AEE31365.1| carbon catabolite repressor protein 4-like 4 [Arabidopsis thaliana] Length = 417 Score = 38.2 bits (87), Expect = 1.3, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 19/52 (36%), Gaps = 13/52 (25%) Query: 223 IDHIMLSPEATSLLHSARID-------TKPRGWT----KPSDHTPVIVSLDI 263 +D+I +SP + I G+ PSDH P+ +I Sbjct: 365 LDYIFISPS--DFIKPVSILQLPEPDSPDVVGFLPNHHHPSDHLPIGAEFEI 414 Score = 38.2 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 23/61 (37%), Gaps = 1/61 (1%) Query: 15 RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKY 74 +AR H + + +K D CLQE E +F + SL Y + + + Sbjct: 121 KARSHAILSVLKNLQADFFCLQEVD-EYDSFYRNNMDSLGYSGIYIQRTGQRKRDGCAIF 179 Query: 75 Q 75 Sbjct: 180 Y 180 >gi|12322547|gb|AAG51276.1|AC027135_17 hypothetical protein [Arabidopsis thaliana] gi|12597833|gb|AAG60143.1|AC074360_8 hypothetical protein [Arabidopsis thaliana] Length = 335 Score = 38.2 bits (87), Expect = 1.3, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 19/52 (36%), Gaps = 13/52 (25%) Query: 223 IDHIMLSPEATSLLHSARID-------TKPRGWT----KPSDHTPVIVSLDI 263 +D+I +SP + I G+ PSDH P+ +I Sbjct: 283 LDYIFISPS--DFIKPVSILQLPEPDSPDVVGFLPNHHHPSDHLPIGAEFEI 332 Score = 38.2 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 23/61 (37%), Gaps = 1/61 (1%) Query: 15 RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKY 74 +AR H + + +K D CLQE E +F + SL Y + + + Sbjct: 25 KARSHAILSVLKNLQADFFCLQEVD-EYDSFYRNNMDSLGYSGIYIQRTGQRKRDGCAIF 83 Query: 75 Q 75 Sbjct: 84 Y 84 >gi|79605875|ref|NP_973943.2| endonuclease/exonuclease/phosphatase family protein [Arabidopsis thaliana] gi|332193243|gb|AEE31364.1| carbon catabolite repressor protein 4-like 4 [Arabidopsis thaliana] Length = 358 Score = 38.2 bits (87), Expect = 1.3, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 19/52 (36%), Gaps = 13/52 (25%) Query: 223 IDHIMLSPEATSLLHSARID-------TKPRGWT----KPSDHTPVIVSLDI 263 +D+I +SP + I G+ PSDH P+ +I Sbjct: 306 LDYIFISPS--DFIKPVSILQLPEPDSPDVVGFLPNHHHPSDHLPIGAEFEI 355 Score = 38.2 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 23/61 (37%), Gaps = 1/61 (1%) Query: 15 RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKY 74 +AR H + + +K D CLQE E +F + SL Y + + + Sbjct: 62 KARSHAILSVLKNLQADFFCLQEVD-EYDSFYRNNMDSLGYSGIYIQRTGQRKRDGCAIF 120 Query: 75 Q 75 Sbjct: 121 Y 121 >gi|42562445|ref|NP_174435.2| endonuclease/exonuclease/phosphatase family protein [Arabidopsis thaliana] gi|332193241|gb|AEE31362.1| carbon catabolite repressor protein 4-like 4 [Arabidopsis thaliana] Length = 388 Score = 38.2 bits (87), Expect = 1.3, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 19/52 (36%), Gaps = 13/52 (25%) Query: 223 IDHIMLSPEATSLLHSARID-------TKPRGWT----KPSDHTPVIVSLDI 263 +D+I +SP + I G+ PSDH P+ +I Sbjct: 336 LDYIFISPS--DFIKPVSILQLPEPDSPDVVGFLPNHHHPSDHLPIGAEFEI 385 Score = 38.2 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 23/61 (37%), Gaps = 1/61 (1%) Query: 15 RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKY 74 +AR H + + +K D CLQE E +F + SL Y + + + Sbjct: 92 KARSHAILSVLKNLQADFFCLQEVD-EYDSFYRNNMDSLGYSGIYIQRTGQRKRDGCAIF 150 Query: 75 Q 75 Sbjct: 151 Y 151 >gi|228990178|ref|ZP_04150148.1| Endonuclease/exonuclease/phosphatase [Bacillus pseudomycoides DSM 12442] gi|228769541|gb|EEM18134.1| Endonuclease/exonuclease/phosphatase [Bacillus pseudomycoides DSM 12442] Length = 788 Score = 38.2 bits (87), Expect = 1.3, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%) Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263 +DHI+++ ++ I + + SDH PV+ +D+ Sbjct: 741 LDHILVTNNIAPHTVVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784 >gi|228996264|ref|ZP_04155909.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock3-17] gi|229003931|ref|ZP_04161737.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock1-4] gi|228757300|gb|EEM06539.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock1-4] gi|228763456|gb|EEM12358.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock3-17] Length = 788 Score = 38.2 bits (87), Expect = 1.3, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%) Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263 +DHI+++ ++ I + + SDH PV+ +D+ Sbjct: 741 LDHILVTNNIAPHTVVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784 >gi|229095675|ref|ZP_04226655.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-29] gi|228687708|gb|EEL41606.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-29] Length = 190 Score = 38.2 bits (87), Expect = 1.3, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%) Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263 +DHI+++ ++ I + + SDH PV+ +D+ Sbjct: 143 LDHILVTNNIAPHTVVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 186 >gi|229114626|ref|ZP_04244040.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock1-3] gi|228668691|gb|EEL24119.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock1-3] Length = 786 Score = 38.2 bits (87), Expect = 1.3, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%) Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263 +DHI+++ ++ I + + SDH PV+ +D+ Sbjct: 739 LDHILVTNNIAPHTVVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 782 >gi|218195351|gb|EEC77778.1| hypothetical protein OsI_16940 [Oryza sativa Indica Group] Length = 299 Score = 38.2 bits (87), Expect = 1.3, Method: Composition-based stats. Identities = 10/37 (27%), Positives = 20/37 (54%), Gaps = 5/37 (13%) Query: 7 ATWNVNS-----IRARIHNLAAWIKENNPDIICLQET 38 T+NV S + R+ + + ++++ PD+I QE Sbjct: 1 MTYNVWSREDVAVYTRMKAIGSLVEKHKPDVIFFQEI 37 >gi|66472474|ref|NP_001018474.1| CCR4-NOT transcription complex subunit 6-like [Danio rerio] gi|63100861|gb|AAH95634.1| CCR4-NOT transcription complex, subunit 6-like [Danio rerio] gi|182890998|gb|AAI64274.1| Cnot6l protein [Danio rerio] Length = 559 Score = 38.2 bits (87), Expect = 1.3, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 22/56 (39%), Gaps = 5/56 (8%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKN---FPFETLQSLNYHIETCGQKSYNGVA 69 R + I + DII LQE E + F ETL+ Y C + V+ Sbjct: 215 RKKGIMEEITNCDADIISLQEV--ETEQYYTFFLETLKDRGYDGFFCPKSRAKLVS 268 >gi|147833952|emb|CAN64339.1| hypothetical protein VITISV_031562 [Vitis vinifera] Length = 1739 Score = 38.2 bits (87), Expect = 1.3, Method: Composition-based stats. Identities = 8/27 (29%), Positives = 16/27 (59%) Query: 13 SIRARIHNLAAWIKENNPDIICLQETK 39 R + + +++ NPD++ +QETK Sbjct: 605 GSRNKRRMVKDFLRSXNPDVVMIQETK 631 >gi|260777714|ref|ZP_05886607.1| hypothetical protein VIC_003111 [Vibrio coralliilyticus ATCC BAA-450] gi|260605727|gb|EEX32012.1| hypothetical protein VIC_003111 [Vibrio coralliilyticus ATCC BAA-450] Length = 296 Score = 38.2 bits (87), Expect = 1.3, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 1/41 (2%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKP-SDHTPVIVSLD 262 IDHI++SP T+ + + SDH P+ L+ Sbjct: 256 IDHIIVSPGLTTAQTNQDVFPTSLVLQHHLSDHCPISTQLN 296 >gi|169787326|gb|ACA80102.1| putative DNA lyase [Colletotrichum nicholsonii] Length = 233 Score = 38.2 bits (87), Expect = 1.3, Method: Composition-based stats. Identities = 10/56 (17%), Positives = 22/56 (39%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80 + DI+ +QETK + K+ + + + + K G + ++ Y Sbjct: 2 FEILEADIVIMQETKIQRKDLHDDMVLVPGWDVFFSLPKHKKGYSGVAIYTRNATC 57 >gi|169787256|gb|ACA80067.1| putative DNA lyase [Colletotrichum nicholsonii] gi|169787264|gb|ACA80071.1| putative DNA lyase [Colletotrichum nicholsonii] gi|169787302|gb|ACA80090.1| putative DNA lyase [Colletotrichum nicholsonii] gi|169787310|gb|ACA80094.1| putative DNA lyase [Colletotrichum nicholsonii] Length = 233 Score = 38.2 bits (87), Expect = 1.3, Method: Composition-based stats. Identities = 10/56 (17%), Positives = 22/56 (39%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80 + DI+ +QETK + K+ + + + + K G + ++ Y Sbjct: 2 FEILEADIVIMQETKIQRKDLHDDMVLVPGWDVFFSLPKHKKGYSGVAIYTRNATC 57 >gi|169787200|gb|ACA80039.1| putative DNA lyase [Colletotrichum nicholsonii] Length = 233 Score = 38.2 bits (87), Expect = 1.3, Method: Composition-based stats. Identities = 10/56 (17%), Positives = 22/56 (39%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80 + DI+ +QETK + K+ + + + + K G + ++ Y Sbjct: 2 FEILEADIVIMQETKIQRKDLHDDMVLVPGWDVFFSLPKHKKGYSGVAIYTRNATC 57 >gi|229065513|ref|ZP_04200760.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH603] gi|228715763|gb|EEL67537.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH603] Length = 190 Score = 38.2 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 22/47 (46%), Gaps = 9/47 (19%) Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263 +DHI+++ ++ I + + SDH PV+V +D+ Sbjct: 143 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLVQIDL 186 >gi|229131979|ref|ZP_04260843.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST196] gi|228651483|gb|EEL07454.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST196] Length = 788 Score = 38.2 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 22/47 (46%), Gaps = 9/47 (19%) Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263 +DHI+++ ++ I + + SDH PV+V +D+ Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLVQIDL 784 >gi|229166011|ref|ZP_04293775.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH621] gi|228617422|gb|EEK74483.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH621] Length = 788 Score = 38.2 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 22/47 (46%), Gaps = 9/47 (19%) Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263 +DHI+++ ++ I + + SDH PV+V +D+ Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLVQIDL 784 >gi|159901673|ref|YP_001547919.1| signal transduction protein [Herpetosiphon aurantiacus ATCC 23779] gi|159894712|gb|ABX07791.1| putative signal transduction protein with Nacht domain [Herpetosiphon aurantiacus ATCC 23779] Length = 969 Score = 38.2 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 20/184 (10%), Positives = 39/184 (21%), Gaps = 12/184 (6%) Query: 36 QETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFI 95 QET + F E Y Q+ G I + G + Q Sbjct: 678 QETTHLSQQFGREGTHYWRYMPAGQYQRGDAGTDIAETIEKHLGDFDPAGMNHRGQGDTQ 737 Query: 96 EATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGD-- 153 + IG + + + + + + + + Sbjct: 738 IGDVGVVPHPYWIGQFMVTVEQYQAFIQAGGYHTDRWWSTHGKAWKTMIACSEPWWWEQQ 797 Query: 154 ----------YNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHH 203 Y + Y + + + + A H H Sbjct: 798 TLQQYINQPIYGVSWYEAVAYCNWLNHYLQPMLPVGYRVCVPSETEWMSAAYNDEHGQFH 857 Query: 204 LYSF 207 YS+ Sbjct: 858 NYSW 861 >gi|90412320|ref|ZP_01220325.1| hypothetical protein P3TCK_09808 [Photobacterium profundum 3TCK] gi|90326811|gb|EAS43204.1| hypothetical protein P3TCK_09808 [Photobacterium profundum 3TCK] Length = 286 Score = 38.2 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 32/247 (12%), Positives = 69/247 (27%), Gaps = 20/247 (8%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQP 76 R +++ E N DI LQE + + NY G+ Sbjct: 49 RKEIVSSIFSEQNIDIAGLQE--AFNDQIIYLARNLSNYGWVGVGRDDGKTKGEAVPIFY 106 Query: 77 IEIVT----HLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIK 132 + + + + + ++ I Sbjct: 107 RADKYVKLGGGTFWLSETPEVVASVGWDADLTRITSWVRLEDKESSKRVLVFNAHFDHIG 166 Query: 133 RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192 + R S +L ++ GD +D + N + ++ L N + Sbjct: 167 KVARQQSAKLLSKKAKEIIGD------DNDAVIVLGDLNFERSDVASYEALTSLFNDARS 220 Query: 193 DAIRATHDTHH-LYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP 251 I+ Y++ Y+ + ID+I ++ + +++ + + Sbjct: 221 TTIKPFEGIDGKEYTYHGYFKEPTED-----IDYIFVNDKL--RVNTFKYVNVIKDGIYS 273 Query: 252 SDHTPVI 258 SDH VI Sbjct: 274 SDHLSVI 280 >gi|163938988|ref|YP_001643872.1| endonuclease/exonuclease/phosphatase [Bacillus weihenstephanensis KBAB4] gi|163861185|gb|ABY42244.1| Endonuclease/exonuclease/phosphatase [Bacillus weihenstephanensis KBAB4] Length = 788 Score = 38.2 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 22/47 (46%), Gaps = 9/47 (19%) Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263 +DHI+++ ++ I + + SDH PV+V +D+ Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLVQIDL 784 >gi|296411058|ref|XP_002835252.1| hypothetical protein [Tuber melanosporum Mel28] gi|295628027|emb|CAZ79373.1| unnamed protein product [Tuber melanosporum] Length = 431 Score = 38.2 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 30/81 (37%), Gaps = 13/81 (16%) Query: 200 DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 H +++ SW+ RI + + S +H + K SDH PV+ Sbjct: 303 PDDHSWNWAPLRWPSWTD----RILY-LPSENL--RVHKYTSIQEI----KSSDHRPVVA 351 Query: 260 SLDIPEPRKKQQDSTSQNMKP 280 + IP + S ++P Sbjct: 352 HISIPA--EPLSASDGWRVRP 370 >gi|196230175|ref|ZP_03129038.1| Endonuclease/exonuclease/phosphatase [Chthoniobacter flavus Ellin428] gi|196225772|gb|EDY20279.1| Endonuclease/exonuclease/phosphatase [Chthoniobacter flavus Ellin428] Length = 379 Score = 38.2 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 30/246 (12%), Positives = 57/246 (23%), Gaps = 33/246 (13%) Query: 12 NS--IRAR--------IHNLAAWIKENNPDIICLQETKTEDKN----FPFETLQSLNYHI 57 N +RA +++ PDII +Q+ K + P L+ Sbjct: 128 NGSELRAVTFNFGESNRPQFMSFLDAVKPDIILIQDAKGRGADLGRKIPGMYFSDLDQFA 187 Query: 58 ETCGQKSYNG--VAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 V + + A + T Q R Sbjct: 188 FLSKFPIQKAELVGGAKIHGEPVAARYEIQYQGRTIAIYSVHLPTPRQQLSRFLGGRHIL 247 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 G+ + + ++R + AG + + + + Sbjct: 248 GDLAGHGHREAGYGDFRDWVRER---------MSLAGALAKVLAEEKEPMIVGGDFNTPD 298 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWD-YYADSWSKNKGIRIDHIMLSPEATS 234 + F F R T Y+ + W +RID+ Sbjct: 299 HGYIYHIFAGEMTDCFARVGRGWGLTFPGYTHNPISFFGPW-----LRIDYFFTGKGW-- 351 Query: 235 LLHSAR 240 + R Sbjct: 352 RVTECR 357 >gi|285017614|ref|YP_003375325.1| hypothetical protein XALc_0819 [Xanthomonas albilineans GPE PC73] gi|283472832|emb|CBA15337.1| conserved hypothetical protein [Xanthomonas albilineans] Length = 289 Score = 38.2 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 29/273 (10%), Positives = 57/273 (20%), Gaps = 34/273 (12%) Query: 4 VTVATWNVNSIRA------------RIHNLAAWIKENNPDIICLQE-TKTEDKNFPFETL 50 + V ++NV R R +A I+ +PD+ QE K + + L Sbjct: 36 LKVMSFNV---RVPIDTEGDKRWEVRRSAMAVLIRAQHPDLFGTQELIKRQADYLATK-L 91 Query: 51 QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 + + + + + L + + + Sbjct: 92 PDYRWFGRSRDGNEDGERMGVFYDRHRLKLLASGDFWLSDTPEIPGSISWGHPLPRMVNW 151 Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170 R + + + +P + Sbjct: 152 GLFERIADGRRFYL----FDTHLPYREQDESARAKGAALILSRLRALPANVPVVLTGDFN 207 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230 + + T H ++ RID I+ + Sbjct: 208 TVQDSPTYRTLTRTLTDARTQVTQPQGPEATFHDFTGHPDR----------RIDWIL-TR 256 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 PSDH PVI Sbjct: 257 GL--HATRYATLDARPQGHWPSDHFPVIAEFAW 287 >gi|222152427|ref|YP_002561602.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus uberis 0140J] gi|222113238|emb|CAR40741.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus uberis 0140J] Length = 273 Score = 38.2 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 37/269 (13%), Positives = 69/269 (25%), Gaps = 16/269 (5%) Query: 5 TVATWNVNSI---RARIHNLAAW---IKENNPDIICLQETK-------TEDKNFPFETLQ 51 T N +S A + L I D+ICLQE E+ F Sbjct: 3 KFLTLNTHSWMEANA-LKKLVDLAEHILAEKYDVICLQEINQLINSELAEEDFFYRPIPG 61 Query: 52 SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 + H + N + ++ + G D+ + I + I + + + Sbjct: 62 TPALHKDNFALLLVNYLQKRGQHYYWSWAYNHIGYDIYHEGVAIFSKKPITATDILMSQV 121 Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 H K + + +I + Sbjct: 122 DDEHDYHTRRALLAKTEIDGKETALVSLHMSWFGKGFEGEWTTLETELNALGIPLMIMGD 181 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 T + +G D+ + YS + ++DH S E Sbjct: 182 FNNPTDLEGYQLIEASPLGLRDSHKVADKVFGDYSIVADIDGWKDNKESYKVDHAFASKE 241 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 + + I + SDH + V+ Sbjct: 242 FD--ILRSEITFEGGSAPVISDHFGLEVT 268 >gi|83942866|ref|ZP_00955326.1| endonuclease/exonuclease/phosphatase family protein [Sulfitobacter sp. EE-36] gi|83845874|gb|EAP83751.1| endonuclease/exonuclease/phosphatase family protein [Sulfitobacter sp. EE-36] Length = 341 Score = 38.2 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 12/53 (22%) Query: 223 IDHIMLSPEATSLLHSARI---DTKPRGW---------TKPSDHTPVIVSLDI 263 +D+IM+SP T+ RI P W SDH PV + LD+ Sbjct: 285 LDYIMISPALTAHRPHWRIWHPLDDPECWGDAALRDALITASDHFPVTIDLDL 337 >gi|290989101|ref|XP_002677183.1| predicted protein [Naegleria gruberi] gi|284090789|gb|EFC44439.1| predicted protein [Naegleria gruberi] Length = 422 Score = 38.2 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 3/51 (5%) Query: 17 RIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYHIETCGQKSYN 66 R NL I+ N DIICLQE K E+ F + L+ L Y Q + + Sbjct: 54 RRENLLNEIEFYNSDIICLQEVDKYEE--FWKDKLKELGYSSFYHAQYNPS 102 >gi|114765835|ref|ZP_01444928.1| metal-dependent hydrolase [Pelagibaca bermudensis HTCC2601] gi|114541834|gb|EAU44871.1| metal-dependent hydrolase [Roseovarius sp. HTCC2601] Length = 223 Score = 38.2 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 8/42 (19%), Positives = 18/42 (42%), Gaps = 11/42 (26%) Query: 4 VTVATWNVNSIRARIH--------NLAAWIKENNPDIICLQE 37 + +A++N IR + + + + + D + LQE Sbjct: 1 MKIASYN---IRKALGTDRRRDPARILKVLNQIDADAVLLQE 39 >gi|238508578|ref|XP_002385478.1| reverse transcriptase, putative [Aspergillus flavus NRRL3357] gi|220688370|gb|EED44723.1| reverse transcriptase, putative [Aspergillus flavus NRRL3357] Length = 1312 Score = 38.2 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 35/272 (12%), Positives = 67/272 (24%), Gaps = 31/272 (11%) Query: 21 LAAWIKE---NNPDIICLQETKTEDKNFP-FETLQSLNYHIETCGQKSYNGVAILSKYQP 76 +A ++++ DII +QE P +H + A + Q Sbjct: 1 MAQFLRDPEVRQADIIAIQE--------PWRNPYSDTTHHPAFGSHQLLYPTADDTGGQR 52 Query: 77 IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 + ++ + + L + L N +D + + Sbjct: 53 ARVALYISRKINPRTWKHTVHSADCQELELHVHGRRLRIFNIYNPGPWD---TGRTDTVD 109 Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIR 196 + I GD+N+ + +D E + + R Sbjct: 110 LLDHVVPERGDHIVLGDFNLHHPAWSERDAH---DDPAAAGETTTTNDDTDDTSRDRQTR 166 Query: 197 ATHDTHHLYSFWDYYADS-W---------SKNKGIRIDHIMLSPEATSLLHSARIDTKPR 246 L F D W N ID + + + + K Sbjct: 167 TDRKAPQLLEFADSRLLDLWLEPGTVTRDQNNHRSTIDLVFGAQSLADQYIACEVAPKVH 226 Query: 247 GWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278 SDH P+ LD+ + Sbjct: 227 TD---SDHLPIRTILDLAPHAYQPPKRRQWKA 255 >gi|223944849|gb|ACN26508.1| unknown [Zea mays] Length = 282 Score = 38.2 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 29/241 (12%), Positives = 57/241 (23%), Gaps = 32/241 (13%) Query: 29 NPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDL 88 +PD++CLQE + ++S Y + Sbjct: 43 DPDVVCLQEV--DRFQDIAAGMKSRGYEGIFQRRTGDTRDGCA------------IFWKS 88 Query: 89 DVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPL 148 E + + LR + + K+ + + +L P Sbjct: 89 KQLHLVEEDSIDFSEFNLRNNVAQICVFELNGTHKFVLGNIHVLFNPKRGDVKLGQTYPD 148 Query: 149 IFAGDYNIIPQPHDCYNPIIWEN-DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF 207 I + N + N S + + Y Sbjct: 149 ISHSLLKYQWTDEEVRNATGYSNVMVAEHPLKLSSSYAMLKGNSNNRGLHGEPLATSYH- 207 Query: 208 WDYYADSWSKNKGIRIDHIMLSPEAT-SLLHS---ARIDTKPRG---WTKPSDHTPVIVS 260 K G +D++ + S + + + RG SDH P++ Sbjct: 208 --------RKFLGT-VDYLWHTHGIECSRVLDTLPISVLKRTRGLPTREIGSDHLPIVAE 258 Query: 261 L 261 Sbjct: 259 F 259 >gi|222612692|gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group] Length = 1594 Score = 38.2 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 20/136 (14%), Positives = 43/136 (31%), Gaps = 13/136 (9%) Query: 134 FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW-----ENDACFTLEVRQSFQKLQN 188 L + P C ++ + + + ++ Sbjct: 398 CLYGDAHSETKHRTWTTMRGLIDNPTTPWLMAGDFNEILFSHEKQCGRMKAQSAMDEFRH 457 Query: 189 MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR--IDHIMLSPEATSLLHSARIDTKPR 246 + +++ S S+ IR +D + +PE ++ +AR+ Sbjct: 458 ALTDCGLDDLGFEGDAFTW---RNHSHSQEGYIREWLDRAVANPEWRAMFPAARVIN--- 511 Query: 247 GWTKPSDHTPVIVSLD 262 G + SDH PVI+ L+ Sbjct: 512 GDPRHSDHRPVIIELE 527 >gi|227204495|dbj|BAH57099.1| AT1G31500 [Arabidopsis thaliana] Length = 222 Score = 38.2 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 23/61 (37%), Gaps = 1/61 (1%) Query: 15 RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKY 74 +AR H + + +K D CLQE E +F + SL Y + + + Sbjct: 92 KARSHAILSVLKNLQADFFCLQEVD-EYDSFYRNNMDSLGYSGIYIQRTGQRKRDGCAIF 150 Query: 75 Q 75 Sbjct: 151 Y 151 >gi|168002952|ref|XP_001754177.1| predicted protein [Physcomitrella patens subsp. patens] gi|162694731|gb|EDQ81078.1| predicted protein [Physcomitrella patens subsp. patens] Length = 331 Score = 38.2 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 9/52 (17%), Positives = 18/52 (34%), Gaps = 18/52 (34%) Query: 5 TVATWN------VNSI------------RARIHNLAAWIKENNPDIICLQET 38 + ++N V I + R + + + D++CLQE Sbjct: 1 RIVSYNILAQSYVKGISFPHSPSPCLRWKNRSKAVLERLLSFDADVLCLQEL 52 >gi|42571707|ref|NP_973944.1| endonuclease/exonuclease/phosphatase family protein [Arabidopsis thaliana] gi|332193242|gb|AEE31363.1| carbon catabolite repressor protein 4-like 4 [Arabidopsis thaliana] Length = 283 Score = 38.2 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 23/61 (37%), Gaps = 1/61 (1%) Query: 15 RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKY 74 +AR H + + +K D CLQE E +F + SL Y + + + Sbjct: 87 KARSHAILSVLKNLQADFFCLQEVD-EYDSFYRNNMDSLGYSGIYIQRTGQRKRDGCAIF 145 Query: 75 Q 75 Sbjct: 146 Y 146 >gi|308478231|ref|XP_003101327.1| hypothetical protein CRE_13469 [Caenorhabditis remanei] gi|308263228|gb|EFP07181.1| hypothetical protein CRE_13469 [Caenorhabditis remanei] Length = 1815 Score = 38.2 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 15/167 (8%), Positives = 29/167 (17%), Gaps = 5/167 (2%) Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 + ++ V + Q E +L N + + + G Sbjct: 1059 VSGQCPCHDNVIGMQCDQCAENHFNLASGAGCEACGCDPNGVVPNHEGVPHLQCNIFDGQ 1118 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + L + P Sbjct: 1119 CQCKPGRGGRKCDQCEDLYWGDPTTPDGCH-----RCECNPTGSKSLQCHRNNGTCECQP 1173 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRID 224 + G+T + + WD K ID Sbjct: 1174 GSGGALCNECARGYTGQWPYCNPCGECFHQWDNIMQKLQKQVHALID 1220 >gi|149247002|ref|XP_001527926.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] gi|146447880|gb|EDK42268.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL YB-4239] Length = 299 Score = 38.2 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 2/41 (4%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 ID I S +L I G SDH PVI ++I Sbjct: 261 IDFIWTSQNI-PILQHCTISQDCCGCL-CSDHRPVIAIIEI 299 >gi|68077019|ref|XP_680429.1| hypothetical protein [Plasmodium berghei strain ANKA] gi|56501361|emb|CAH96637.1| conserved hypothetical protein [Plasmodium berghei] Length = 633 Score = 38.2 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 30/240 (12%), Positives = 63/240 (26%), Gaps = 23/240 (9%) Query: 31 DIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDV 90 DI K D E ++ + + G +N + + H + V Sbjct: 410 DIF----IKLSDDL--DEIIKEIK-TVYQIGIFMHNTSQNIFIIANTHLYFHSLAQHIRV 462 Query: 91 QARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIF 150 + + I + ++ +E + Sbjct: 463 IQVYCILHILEKIKNKYKNKYKNKEIYVILNGDFNTNFESEVFSFVQGDDIMENSKLWEN 522 Query: 151 AGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDY 210 + + + Y + + ++ + +N F A Y+ W+ Sbjct: 523 SKLFKKEYDDLNKYPTLFNIENNSNDQKINGLYLNRKN--FLPLYSAYKKVDIPYTNWN- 579 Query: 211 YADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK-------PSDHTPVIVSLDI 263 N +D+I LSPE +D K PSDH + +++ Sbjct: 580 ------NNFIDVLDYIFLSPELKVKRVLKGMDKHLFDQYKGVVSPFNPSDHLSIAAEIEL 633 >gi|83951017|ref|ZP_00959750.1| hypothetical protein ISM_07945 [Roseovarius nubinhibens ISM] gi|83838916|gb|EAP78212.1| hypothetical protein ISM_07945 [Roseovarius nubinhibens ISM] Length = 341 Score = 38.2 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 14/48 (29%) Query: 3 VVTVATWNV----NS-------IR---ARIHNLAAWIKENNPDIICLQ 36 + +ATWNV +R A+ +A I ++ PDI+ LQ Sbjct: 12 TLRLATWNVELSRAGPGILLRDLRRGDAQADAVAEIIADHAPDILLLQ 59 >gi|116793209|gb|ABK26655.1| unknown [Picea sitchensis] Length = 322 Score = 38.2 bits (87), Expect = 1.4, Method: Composition-based stats. Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 7/39 (17%) Query: 6 VATWNVNSIR------ARIHNLAAWIKENNPDIICLQET 38 T+NV R AR+ L I+++ P IC QE Sbjct: 81 FLTYNVW-FREDLEVHARMKALGDLIEQHQPHFICFQEV 118 >gi|307103760|gb|EFN52018.1| hypothetical protein CHLNCDRAFT_139582 [Chlorella variabilis] Length = 632 Score = 38.2 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 17/150 (11%), Positives = 34/150 (22%), Gaps = 7/150 (4%) Query: 20 NLAAWIKENNPDIICLQE-TKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIE 78 + W+KE NPD++ L E D E ++H + + V Sbjct: 288 QILEWVKEVNPDVVFLFENVDLSDHQ---EPAIREDWHTVKRMLRCRHAVDTAWHRAAGP 344 Query: 79 IVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFL--- 135 P +A +R + Sbjct: 345 PHACTPAPCFQPNVLIFDAALVSPAHRVRAYWEDRDLATALHPCHRPKLSPTTDNPRIFA 404 Query: 136 RFASQRLELEEPLIFAGDYNIIPQPHDCYN 165 F + + + + ++ N Sbjct: 405 HFNKKGQPMRKYPTVCRTWQAEHGAYNLAN 434 >gi|290581317|ref|YP_003485709.1| hypothetical protein SmuNN2025_1791 [Streptococcus mutans NN2025] gi|254998216|dbj|BAH88817.1| hypothetical protein SMU.2046c [Streptococcus mutans NN2025] Length = 280 Score = 38.2 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 33/270 (12%), Positives = 85/270 (31%), Gaps = 22/270 (8%) Query: 2 SVVTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56 ++V + T N +S + ++ L I EN+ D+IC+QE ++ E + L + Sbjct: 7 TMVKLLTINSHSWMEEDPQKKLEILGKTILENDYDVICVQEV---NQLLHSEPAKDLPNY 63 Query: 57 IET-----CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111 + + +Y + + + + RF E ++ L + Sbjct: 64 CQVAGTPAIHKDNYALQLVTFLLEQERVYYWSWAYNHIGYDRFQEGVAILSKTPLVSQGI 123 Query: 112 YLPHGNPITSTKYDD-----KISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 + + + + + + + + + P Sbjct: 124 LISDVDDEHNYHTRRALLGKTKIDQEDIAIVSLHMSWWNKGFQGEWN-KLERALSNLKLP 182 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK-GIRIDH 225 ++ D E L++ + + + D W N+ +++D+ Sbjct: 183 LLLMGDFNNPYENEGYQAILKSSLKLQDSHQSAKITYGKATIQKEIDGWQGNQEALKVDY 242 Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHT 255 + LS + + + + + + SDH Sbjct: 243 VFLSSDW--QVEKSEVIFDGKHYPMISDHC 270 >gi|260825207|ref|XP_002607558.1| hypothetical protein BRAFLDRAFT_119718 [Branchiostoma floridae] gi|229292906|gb|EEN63568.1| hypothetical protein BRAFLDRAFT_119718 [Branchiostoma floridae] Length = 1216 Score = 38.2 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 18/165 (10%), Positives = 36/165 (21%), Gaps = 10/165 (6%) Query: 55 YHIETCGQKSYNGVAILS-KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 YH+ + A + + I ++ P V + L++ Sbjct: 235 YHMNPRQWDHVSEQACCTNCWCCIVVLQMNPRQWDHVSEQACCTNCWCCIVVLQMNPRQW 294 Query: 114 PHGN----PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC-----Y 164 H + + R S++ + P+ D Sbjct: 295 DHVSEQACCTNCWCCIVVLQMNPRQWDHVSEQACCTNCWCCIVVLQMNPRQWDHVSEQAC 354 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWD 209 W + RQ + T+ WD Sbjct: 355 CTNCWCCIVILQMNPRQWDHVSEQACCTNCWCCIVVLQMNPRQWD 399 Score = 35.5 bits (80), Expect = 7.9, Method: Composition-based stats. Identities = 11/159 (6%), Positives = 25/159 (15%), Gaps = 5/159 (3%) Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + +++ + R + Sbjct: 267 QWDHVSEQACCTNCWCCIVVLQMNPRQWDHVSEQACCTNCWCCIVVLQMNPRQWDHVSEQ 326 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC-----YNPIIWE 170 + R S++ + P+ D W Sbjct: 327 ACCTNCWCCIVVLQMNPRQWDHVSEQACCTNCWCCIVILQMNPRQWDHVSEQACCTNCWC 386 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWD 209 + RQ + T+ WD Sbjct: 387 CIVVLQMNPRQWDHVSEQACCTNCWCCIVVLQMNPRQWD 425 >gi|115694560|ref|XP_001182170.1| PREDICTED: similar to bucentaur [Strongylocentrotus purpuratus] gi|115971255|ref|XP_001185554.1| PREDICTED: similar to bucentaur [Strongylocentrotus purpuratus] Length = 318 Score = 38.2 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 32/93 (34%), Gaps = 8/93 (8%) Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 + N H L+++ + ++ ID+IM+ + L + + Sbjct: 220 FCVANSFIIGNTWFEHHPRRLWTWMGPGDRARTQ-----IDYIMVKKRWRTSLQNVKTRP 274 Query: 244 KPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQ 276 G SDH ++ L + KK + + Sbjct: 275 ---GADCGSDHQLLVAKLRLRIKAKKCDSAPTW 304 >gi|315178934|gb|ADT85848.1| extracellular nuclease-related protein [Vibrio furnissii NCTC 11218] Length = 877 Score = 38.2 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 27/77 (35%), Gaps = 26/77 (33%) Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT------------------ 249 W Y S++ G +DH+++S + A D G Sbjct: 777 WSY---SYNDEVGA-LDHLLVSDSLKLRVVDAM-DWHINGGESTLFDYNDEYKGDLPKYA 831 Query: 250 ---KPSDHTPVIVSLDI 263 + SDH P +V L+I Sbjct: 832 DHFRASDHDPAVVELNI 848 >gi|260770890|ref|ZP_05879819.1| extracellular nuclease-related protein [Vibrio furnissii CIP 102972] gi|260614127|gb|EEX39317.1| extracellular nuclease-related protein [Vibrio furnissii CIP 102972] Length = 877 Score = 38.2 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 27/77 (35%), Gaps = 26/77 (33%) Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT------------------ 249 W Y S++ G +DH+++S + A D G Sbjct: 777 WSY---SYNDEVGA-LDHLLVSDSLKLRVVDAM-DWHINGGESTLFDYNDEYKGDLPKYA 831 Query: 250 ---KPSDHTPVIVSLDI 263 + SDH P +V L+I Sbjct: 832 DHFRASDHDPAVVELNI 848 >gi|294954722|ref|XP_002788286.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] gi|239903549|gb|EER20082.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] Length = 1104 Score = 38.2 bits (87), Expect = 1.5, Method: Composition-based stats. Identities = 25/137 (18%), Positives = 42/137 (30%), Gaps = 13/137 (9%) Query: 130 WIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNM 189 F + + LE P I GD+N +PI A E + +L + Sbjct: 118 QKDEFWDVVEEVVRLERPEIVCGDFNARLGSDLARDPIHGLGKAYAYEETNDNGWRLVML 177 Query: 190 GF-----TDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK 244 A HL ++ W + +DH ++ + R+ Sbjct: 178 AAASHMGHAATHFLKPQTHLGTWLSPVEKCWHQ-----LDHFLIWSNRKLQVLDVRVRRT 232 Query: 245 PRGWTKPSDHTPVIVSL 261 G SDH + +S Sbjct: 233 VMGS---SDHCALELSF 246 >gi|242209337|ref|XP_002470516.1| predicted protein [Postia placenta Mad-698-R] gi|220730426|gb|EED84283.1| predicted protein [Postia placenta Mad-698-R] Length = 1315 Score = 37.8 bits (86), Expect = 1.5, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 23/70 (32%), Gaps = 19/70 (27%) Query: 200 DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRG------WTKPSD 253 Y++ Y + IDHI +SP + A ++ + SD Sbjct: 1228 PPAERYTYV-YDQHAQE------IDHIFVSPAIAAR--GADVEHVHMNTWAQTMGERASD 1278 Query: 254 HTP----VIV 259 H P V V Sbjct: 1279 HDPSVARVWV 1288 >gi|302695395|ref|XP_003037376.1| hypothetical protein SCHCODRAFT_48185 [Schizophyllum commune H4-8] gi|300111073|gb|EFJ02474.1| hypothetical protein SCHCODRAFT_48185 [Schizophyllum commune H4-8] Length = 429 Score = 37.8 bits (86), Expect = 1.5, Method: Composition-based stats. Identities = 47/308 (15%), Positives = 82/308 (26%), Gaps = 36/308 (11%) Query: 4 VTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQET---------------KTE 41 + V + N + R R+ +AA + D+ICLQE + Sbjct: 8 LRVFSLNCWGLKFVSKDRRERVDAIAAALANAEYDVICLQEIWVFSDYERVRDAAAARLP 67 Query: 42 DKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI 101 F + I + V S V A + Sbjct: 68 HSKFYYSGALGAGLAILSRYPIVATAVHPYSLNGAPIDVGAGDWFVGKAAASATLLHPRL 127 Query: 102 NTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161 + +L+ G ++ + A Q EL +I AGD+N IP Sbjct: 128 GLVQVFNTHLFAKGGEDGPEYNRAHRLVNAWEIAKLARQSAELGRYVIAAGDFNSIPTTL 187 Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL---YS-FWDYYADSWSK 217 + R YS + + + Sbjct: 188 PMEVIRDHAALTDAWAITHANPGAGAASPLEALSRFGVTADSPLNTYSAGKPLDSHARA- 246 Query: 218 NKGIRIDHIM------LSPEATSLLHSARI---DTKPRGWTKPSDHTPVIVSLDIPEPRK 268 + G R+D+++ P R+ D P SDH V + +I +P + Sbjct: 247 HWGKRLDYVLYRQPVRAGPHPRLKATQCRVVLTDLVPGRAFSYSDHFGVETTFEIGDPEE 306 Query: 269 KQQDSTSQ 276 ++ Sbjct: 307 LPAPLPTE 314 >gi|255557747|ref|XP_002519903.1| RNA exonuclease NGL1, putative [Ricinus communis] gi|223540949|gb|EEF42507.1| RNA exonuclease NGL1, putative [Ricinus communis] Length = 443 Score = 37.8 bits (86), Expect = 1.5, Method: Composition-based stats. Identities = 11/64 (17%), Positives = 22/64 (34%), Gaps = 1/64 (1%) Query: 15 RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKY 74 ++R + +K D +CLQE E +F + ++ Y + Y Sbjct: 135 KSRSKAILTILKNLEADFLCLQEVD-EYDSFYKQNMEIHGYSSIYIQRSGQKRDGCGIFY 193 Query: 75 QPIE 78 + Sbjct: 194 KHDC 197 >gi|219116713|ref|XP_002179151.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217409042|gb|EEC48974.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 765 Score = 37.8 bits (86), Expect = 1.5, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 9/54 (16%) Query: 219 KGIR--IDHIMLSPEA-------TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +G R +DHI++SP+ + DT PSDH +I +D+ Sbjct: 705 RGFRGTLDHILVSPDLIPLKSGPMPSMRDVTRDTAMPSERIPSDHVSLICEVDM 758 Score = 36.7 bits (83), Expect = 4.3, Method: Composition-based stats. Identities = 7/22 (31%), Positives = 12/22 (54%) Query: 17 RIHNLAAWIKENNPDIICLQET 38 R+ + I + D++CLQE Sbjct: 445 RLPLILHEILAHQADVVCLQEV 466 >gi|187940074|gb|ACD39207.1| hypothetical protein PACL_0419 [Pseudomonas aeruginosa] Length = 368 Score = 37.8 bits (86), Expect = 1.5, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 8/46 (17%) Query: 224 DHIMLSPEATSLLHSARIDTKPR--GW------TKPSDHTPVIVSL 261 D+I +S L +A I PR GW SDH PV V+L Sbjct: 226 DNIWVSRTHRLKLDNAGIMDYPRMIGWSHEKSRKHVSDHAPVFVTL 271 >gi|218902274|ref|YP_002450108.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus AH820] gi|218539755|gb|ACK92153.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus AH820] Length = 788 Score = 37.8 bits (86), Expect = 1.5, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 22/44 (50%), Gaps = 3/44 (6%) Query: 223 IDHIMLSPEATSL--LHSARIDTKPRGWT-KPSDHTPVIVSLDI 263 +DHI+++ + ++T + SDH PV+V +D+ Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNTNIMKEHGRVSDHDPVLVQIDL 784 >gi|68063165|ref|XP_673592.1| hypothetical protein [Plasmodium berghei strain ANKA] gi|56491555|emb|CAI03741.1| hypothetical protein PB405569.00.0 [Plasmodium berghei] Length = 90 Score = 37.8 bits (86), Expect = 1.5, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 19/41 (46%), Gaps = 8/41 (19%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKN 44 + + +N+ W+ + +P CLQET+ DK+ Sbjct: 3 MKI--FNLKG------QQTDWLHKQDPTFCCLQETRLRDKD 35 >gi|323453471|gb|EGB09342.1| hypothetical protein AURANDRAFT_62900 [Aureococcus anophagefferens] Length = 393 Score = 37.8 bits (86), Expect = 1.5, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 11/56 (19%) Query: 223 IDHIMLSPEA----TSLLHSARIDTKPRGW-------TKPSDHTPVIVSLDIPEPR 267 ID I++S A T+ + A + TK SDH PV V ++ + Sbjct: 338 IDWILVSSPAFVEGTAAVLDAEVHTKQCAAWSAYNHTRYGSDHYPVSVDFELHPNQ 393 >gi|119489711|ref|ZP_01622470.1| hypothetical protein L8106_13340 [Lyngbya sp. PCC 8106] gi|119454448|gb|EAW35597.1| hypothetical protein L8106_13340 [Lyngbya sp. PCC 8106] Length = 273 Score = 37.8 bits (86), Expect = 1.5, Method: Composition-based stats. Identities = 12/78 (15%), Positives = 25/78 (32%), Gaps = 11/78 (14%) Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT----KPR 246 + + D+ +D + +S + S++I Sbjct: 199 ENQVWTWVRPQEIIATHCSSRYDTV-------LDFVFISSQIQPRSASSKILYPEADYCP 251 Query: 247 GWTKPSDHTPVIVSLDIP 264 ++ SDH PV +L +P Sbjct: 252 DTSQKSDHRPVQATLSLP 269 >gi|328876892|gb|EGG25255.1| inositol 5-phosphatase [Dictyostelium fasciculatum] Length = 1338 Score = 37.8 bits (86), Expect = 1.5, Method: Composition-based stats. Identities = 33/212 (15%), Positives = 55/212 (25%), Gaps = 19/212 (8%) Query: 8 TWNVNSIRARIHNLAAWI--KENNPD--IICLQE---------TKTEDKNFPFETLQSLN 54 +WN N R+ NLA W+ PD +I LQE K + + Sbjct: 426 SWNCNGKRS--TNLANWLLCNNFAPDVVVIGLQEIVDMKASSIVKATAAD--KNNNKENA 481 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 YH + ++ + L G L V + A F ++ + Sbjct: 482 YHPWKHDIEQTLSLSTGGTKYVKVMSKVLVGIMLLVYVKEEHAPFVEEKHGQKVACGAMG 541 Query: 115 HGNP--ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 GN + K + A+ I D + + Sbjct: 542 IGNKGGVGIRFQIYKTGFCFINTHMAAGPSHERMERREKDFKKIQMMSFDNHLSPLDHEC 601 Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL 204 + ++ QN T H Sbjct: 602 LIWCGDLNYRIDLGQNEAKQLIFNKQWQTLHA 633 >gi|281351904|gb|EFB27488.1| hypothetical protein PANDA_007824 [Ailuropoda melanoleuca] Length = 128 Score = 37.8 bits (86), Expect = 1.5, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 27/77 (35%), Gaps = 10/77 (12%) Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 E L+ M T+ R H Y+F ++S RIDHI+ + + Sbjct: 22 ETMILNDTLEQMDLTNTFRTLHPKTAEYTFVSSAHRTFS-----RIDHILAHKTSFNKFK 76 Query: 238 SARIDTKPRGWTKPSDH 254 ++ SDH Sbjct: 77 KIKV-----KPCIFSDH 88 >gi|169787460|gb|ACA80169.1| putative DNA lyase [Colletotrichum cereale] Length = 233 Score = 37.8 bits (86), Expect = 1.5, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 22/57 (38%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81 + DI+ +QETK + K+ + + + + K G + ++ Y Sbjct: 2 FEILGADIVIMQETKIQRKDLHDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATCC 58 >gi|169787328|gb|ACA80103.1| putative DNA lyase [Colletotrichum cereale] Length = 233 Score = 37.8 bits (86), Expect = 1.5, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 22/57 (38%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81 + DI+ +QETK + K+ + + + + K G + ++ Y Sbjct: 2 FEILGADIVIMQETKIQRKDLHDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATCC 58 >gi|169787316|gb|ACA80097.1| putative DNA lyase [Colletotrichum cereale] Length = 233 Score = 37.8 bits (86), Expect = 1.5, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 22/57 (38%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81 + DI+ +QETK + K+ + + + + K G + ++ Y Sbjct: 2 FEILGADIVIMQETKIQRKDLHDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATCC 58 >gi|169787270|gb|ACA80074.1| putative DNA lyase [Colletotrichum cereale] Length = 233 Score = 37.8 bits (86), Expect = 1.5, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 22/57 (38%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81 + DI+ +QETK + K+ + + + + K G + ++ Y Sbjct: 2 FEILGADIVIMQETKIQRKDLHDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATCC 58 >gi|169787266|gb|ACA80072.1| putative DNA lyase [Colletotrichum cereale] gi|169787312|gb|ACA80095.1| putative DNA lyase [Colletotrichum cereale] Length = 233 Score = 37.8 bits (86), Expect = 1.5, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 22/57 (38%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81 + DI+ +QETK + K+ + + + + K G + ++ Y Sbjct: 2 FEILGADIVIMQETKIQRKDLHDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATCC 58 >gi|169787234|gb|ACA80056.1| putative DNA lyase [Colletotrichum cereale] gi|169787236|gb|ACA80057.1| putative DNA lyase [Colletotrichum cereale] gi|169787238|gb|ACA80058.1| putative DNA lyase [Colletotrichum cereale] gi|169787242|gb|ACA80060.1| putative DNA lyase [Colletotrichum cereale] gi|169787248|gb|ACA80063.1| putative DNA lyase [Colletotrichum cereale] gi|169787250|gb|ACA80064.1| putative DNA lyase [Colletotrichum cereale] gi|169787262|gb|ACA80070.1| putative DNA lyase [Colletotrichum cereale] gi|169787268|gb|ACA80073.1| putative DNA lyase [Colletotrichum cereale] gi|169787276|gb|ACA80077.1| putative DNA lyase [Colletotrichum cereale] gi|169787286|gb|ACA80082.1| putative DNA lyase [Colletotrichum cereale] gi|169787294|gb|ACA80086.1| putative DNA lyase [Colletotrichum cereale] gi|169787308|gb|ACA80093.1| putative DNA lyase [Colletotrichum cereale] gi|169787464|gb|ACA80171.1| putative DNA lyase [Colletotrichum cereale] Length = 233 Score = 37.8 bits (86), Expect = 1.5, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 22/57 (38%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81 + DI+ +QETK + K+ + + + + K G + ++ Y Sbjct: 2 FEILGADIVIMQETKIQRKDLHDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATCC 58 >gi|169787212|gb|ACA80045.1| putative DNA lyase [Colletotrichum cereale] Length = 232 Score = 37.8 bits (86), Expect = 1.5, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 22/57 (38%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81 + DI+ +QETK + K+ + + + + K G + ++ Y Sbjct: 2 FEILGADIVIMQETKIQRKDLHDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATCC 58 >gi|169787208|gb|ACA80043.1| putative DNA lyase [Colletotrichum cereale] Length = 233 Score = 37.8 bits (86), Expect = 1.5, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 22/57 (38%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81 + DI+ +QETK + K+ + + + + K G + ++ Y Sbjct: 2 FEILGADIVIMQETKIQRKDLHDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATCC 58 >gi|169787206|gb|ACA80042.1| putative DNA lyase [Colletotrichum cereale] Length = 233 Score = 37.8 bits (86), Expect = 1.5, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 22/57 (38%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81 + DI+ +QETK + K+ + + + + K G + ++ Y Sbjct: 2 FEILGADIVIMQETKIQRKDLHDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATCC 58 >gi|169787196|gb|ACA80037.1| putative DNA lyase [Colletotrichum cereale] gi|169787202|gb|ACA80040.1| putative DNA lyase [Colletotrichum cereale] gi|169787204|gb|ACA80041.1| putative DNA lyase [Colletotrichum cereale] gi|169787226|gb|ACA80052.1| putative DNA lyase [Colletotrichum cereale] gi|169787252|gb|ACA80065.1| putative DNA lyase [Colletotrichum cereale] gi|169787254|gb|ACA80066.1| putative DNA lyase [Colletotrichum cereale] gi|169787296|gb|ACA80087.1| putative DNA lyase [Colletotrichum cereale] gi|169787298|gb|ACA80088.1| putative DNA lyase [Colletotrichum cereale] gi|169787314|gb|ACA80096.1| putative DNA lyase [Colletotrichum cereale] gi|169787374|gb|ACA80126.1| putative DNA lyase [Colletotrichum cereale] gi|169787376|gb|ACA80127.1| putative DNA lyase [Colletotrichum cereale] gi|169787378|gb|ACA80128.1| putative DNA lyase [Colletotrichum cereale] gi|169787380|gb|ACA80129.1| putative DNA lyase [Colletotrichum cereale] gi|169787382|gb|ACA80130.1| putative DNA lyase [Colletotrichum cereale] gi|169787384|gb|ACA80131.1| putative DNA lyase [Colletotrichum cereale] gi|169787386|gb|ACA80132.1| putative DNA lyase [Colletotrichum cereale] gi|169787388|gb|ACA80133.1| putative DNA lyase [Colletotrichum cereale] gi|169787390|gb|ACA80134.1| putative DNA lyase [Colletotrichum cereale] gi|169787392|gb|ACA80135.1| putative DNA lyase [Colletotrichum cereale] gi|169787394|gb|ACA80136.1| putative DNA lyase [Colletotrichum cereale] gi|169787396|gb|ACA80137.1| putative DNA lyase [Colletotrichum cereale] gi|169787398|gb|ACA80138.1| putative DNA lyase [Colletotrichum cereale] gi|169787432|gb|ACA80155.1| putative DNA lyase [Colletotrichum cereale] gi|169787436|gb|ACA80157.1| putative DNA lyase [Colletotrichum cereale] gi|169787450|gb|ACA80164.1| putative DNA lyase [Colletotrichum cereale] gi|169787456|gb|ACA80167.1| putative DNA lyase [Colletotrichum cereale] gi|169787488|gb|ACA80183.1| putative DNA lyase [Colletotrichum cereale] Length = 233 Score = 37.8 bits (86), Expect = 1.5, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 22/57 (38%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81 + DI+ +QETK + K+ + + + + K G + ++ Y Sbjct: 2 FEILGADIVIMQETKIQRKDLHDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATCC 58 >gi|323352556|gb|EGA85055.1| Inp52p [Saccharomyces cerevisiae VL3] Length = 1111 Score = 37.8 bits (86), Expect = 1.5, Method: Composition-based stats. Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 7/37 (18%) Query: 8 TWNVNSIRARIHNLAAWI----KENNPDII--CLQET 38 T+NVN +R +L+ W+ + PD++ LQE Sbjct: 525 TFNVNG-NSRRADLSKWLFPIGDKFKPDVVVLGLQEV 560 >gi|323335797|gb|EGA77076.1| Inp52p [Saccharomyces cerevisiae Vin13] Length = 1111 Score = 37.8 bits (86), Expect = 1.5, Method: Composition-based stats. Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 7/37 (18%) Query: 8 TWNVNSIRARIHNLAAWI----KENNPDII--CLQET 38 T+NVN +R +L+ W+ + PD++ LQE Sbjct: 525 TFNVNG-NSRRADLSKWLFPIGDKFKPDVVVLGLQEV 560 >gi|256273815|gb|EEU08737.1| Inp52p [Saccharomyces cerevisiae JAY291] Length = 1183 Score = 37.8 bits (86), Expect = 1.5, Method: Composition-based stats. Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 7/37 (18%) Query: 8 TWNVNSIRARIHNLAAWI----KENNPDII--CLQET 38 T+NVN +R +L+ W+ + PD++ LQE Sbjct: 597 TFNVNG-NSRRADLSKWLFPIGDKFKPDVVVLGLQEV 632 >gi|207341735|gb|EDZ69710.1| YNL106Cp-like protein [Saccharomyces cerevisiae AWRI1631] Length = 1183 Score = 37.8 bits (86), Expect = 1.5, Method: Composition-based stats. Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 7/37 (18%) Query: 8 TWNVNSIRARIHNLAAWI----KENNPDII--CLQET 38 T+NVN +R +L+ W+ + PD++ LQE Sbjct: 597 TFNVNG-NSRRADLSKWLFPIGDKFKPDVVVLGLQEV 632 >gi|190409094|gb|EDV12359.1| inositol polyphosphate 5-phosphatase [Saccharomyces cerevisiae RM11-1a] Length = 1183 Score = 37.8 bits (86), Expect = 1.5, Method: Composition-based stats. Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 7/37 (18%) Query: 8 TWNVNSIRARIHNLAAWI----KENNPDII--CLQET 38 T+NVN +R +L+ W+ + PD++ LQE Sbjct: 597 TFNVNG-NSRRADLSKWLFPIGDKFKPDVVVLGLQEV 632 >gi|6324224|ref|NP_014293.1| Inp52p [Saccharomyces cerevisiae S288c] gi|1730760|sp|P50942|INP52_YEAST RecName: Full=Inositol-1,4,5-trisphosphate 5-phosphatase 2; AltName: Full=Synaptojanin-like protein 2 gi|1302022|emb|CAA95982.1| PIE3 [Saccharomyces cerevisiae] gi|285814546|tpg|DAA10440.1| TPA: Inp52p [Saccharomyces cerevisiae S288c] Length = 1183 Score = 37.8 bits (86), Expect = 1.5, Method: Composition-based stats. Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 7/37 (18%) Query: 8 TWNVNSIRARIHNLAAWI----KENNPDII--CLQET 38 T+NVN +R +L+ W+ + PD++ LQE Sbjct: 597 TFNVNG-NSRRADLSKWLFPIGDKFKPDVVVLGLQEV 632 >gi|929847|emb|CAA90520.1| ORF N2160 [Saccharomyces cerevisiae] Length = 1102 Score = 37.8 bits (86), Expect = 1.5, Method: Composition-based stats. Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 7/37 (18%) Query: 8 TWNVNSIRARIHNLAAWI----KENNPDII--CLQET 38 T+NVN +R +L+ W+ + PD++ LQE Sbjct: 597 TFNVNG-NSRRADLSKWLFPIGDKFKPDVVVLGLQEV 632 >gi|239834620|ref|ZP_04682948.1| outer membrane autotransporter barrel domain-containing protein [Ochrobactrum intermedium LMG 3301] gi|239822683|gb|EEQ94252.1| outer membrane autotransporter barrel domain-containing protein [Ochrobactrum intermedium LMG 3301] Length = 1199 Score = 37.8 bits (86), Expect = 1.6, Method: Composition-based stats. Identities = 14/90 (15%), Positives = 28/90 (31%), Gaps = 24/90 (26%) Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSL--------------LHSARIDTKPRGWTKP 251 ++ + +K IDH ++S + ++ R Sbjct: 321 TWASW---DRAK-----IDHFLVSRPFGKWYEIVDDPNDPYTGVIKDVKVTRPGRQPEAI 372 Query: 252 SDHTPVIVSLDI--PEPRKKQQDSTSQNMK 279 SDH PV P+ + ++ TS+ Sbjct: 373 SDHEPVAHDFRWVGPQLQTYSENETSKTRL 402 >gi|169787372|gb|ACA80125.1| putative DNA lyase [Colletotrichum cereale] Length = 233 Score = 37.8 bits (86), Expect = 1.6, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 22/57 (38%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81 + DI+ +QETK + K+ + + + + K G + ++ Y Sbjct: 2 FQILEADIVIMQETKIQRKDLHDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATCC 58 >gi|20279456|gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group] Length = 1509 Score = 37.8 bits (86), Expect = 1.6, Method: Composition-based stats. Identities = 20/136 (14%), Positives = 43/136 (31%), Gaps = 13/136 (9%) Query: 134 FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW-----ENDACFTLEVRQSFQKLQN 188 L + P C ++ + + + ++ Sbjct: 395 CLYGDAHSETKHRTWTTMRGLIDNPTTPWLMAGDFNEILFSHEKQCGRMKAQSAMDEFRH 454 Query: 189 MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR--IDHIMLSPEATSLLHSARIDTKPR 246 + +++ S S+ IR +D + +PE ++ +AR+ Sbjct: 455 ALTDCGLDDLGFEGDAFTW---RNHSHSQEGYIREWLDRAVANPEWRAMFPAARVIN--- 508 Query: 247 GWTKPSDHTPVIVSLD 262 G + SDH PVI+ L+ Sbjct: 509 GDPRHSDHRPVIIELE 524 >gi|193212906|ref|YP_001998859.1| endonuclease/exonuclease/phosphatase [Chlorobaculum parvum NCIB 8327] gi|193086383|gb|ACF11659.1| Endonuclease/exonuclease/phosphatase [Chlorobaculum parvum NCIB 8327] Length = 341 Score = 37.8 bits (86), Expect = 1.6, Method: Composition-based stats. Identities = 49/278 (17%), Positives = 85/278 (30%), Gaps = 42/278 (15%) Query: 17 RIHNLAAWIKENN-----PDIICLQETKTEDKNFP--FETLQSLNYHIETCGQKSYNGVA 69 RI + I++ PDI+ ET F + + Y I+ G+ Sbjct: 73 RIAQVFRAIEQQREYERYPDIVAFAET-ENRGVFEGTLQAIDHAQYKIDYHESPDPRGID 131 Query: 70 ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKIS 129 I + P + + I + G+ + N S +D K S Sbjct: 132 IGLAWNPATLKFTGSKPCRVTLDNGRGTRYVIVAGFMASGHPFSVVLNHWPSRSFDAKWS 191 Query: 130 WIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNM 189 KR R ++ + + +N + L +++ + Sbjct: 192 EPKRIAAAKVARHIVDS--LTTRNPMAEIIVMGDFNDHPNDRSIRTVLGSSFDRKEVTSS 249 Query: 190 GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK----- 244 +DT ++ YY W RID I++SP + IDTK Sbjct: 250 ANRLLYNCWNDTKSPGTY--YYRKQWE-----RIDQILVSPALLDNSKLS-IDTKSFRVF 301 Query: 245 -----------------PRGWTKP--SDHTPVIVSLDI 263 RG K SDH P+++ +D+ Sbjct: 302 SIPEMFSHPGKTLYSTYQRGKFKGGYSDHLPLLLKIDV 339 >gi|255946389|ref|XP_002563962.1| Pc20g14870 [Penicillium chrysogenum Wisconsin 54-1255] gi|211588697|emb|CAP86816.1| Pc20g14870 [Penicillium chrysogenum Wisconsin 54-1255] Length = 1659 Score = 37.8 bits (86), Expect = 1.6, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 19/58 (32%), Gaps = 4/58 (6%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 ID ++ S L+ I G SDH + D P K Q+ P Sbjct: 612 IDLVLASDNLADLMTKCVIH----GTKHGSDHRTIETIFDAPWSAPKHQERLRLKNAP 665 >gi|238059546|ref|ZP_04604255.1| hypothetical protein MCAG_00512 [Micromonospora sp. ATCC 39149] gi|237881357|gb|EEP70185.1| hypothetical protein MCAG_00512 [Micromonospora sp. ATCC 39149] Length = 338 Score = 37.8 bits (86), Expect = 1.6, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 22/61 (36%), Gaps = 9/61 (14%) Query: 221 IRIDHIM------LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDST 274 R+DH++ + L D PSDH V ++LDI P + Sbjct: 280 WRLDHVLYRAGDPVRAATRPALLGTACDD---SGQYPSDHFGVALTLDIEAPAPGGSNPA 336 Query: 275 S 275 S Sbjct: 337 S 337 >gi|260831478|ref|XP_002610686.1| hypothetical protein BRAFLDRAFT_117919 [Branchiostoma floridae] gi|229296053|gb|EEN66696.1| hypothetical protein BRAFLDRAFT_117919 [Branchiostoma floridae] Length = 392 Score = 37.8 bits (86), Expect = 1.6, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 6/51 (11%) Query: 7 ATWNVNSIRARIHNLAAWIKENNPDIICLQETK-TEDKNFPFETLQSLNYH 56 TW+V R L + N D++CLQE + + +F LQ L Y Sbjct: 27 LTWDV-----RKEKLLQQFQHYNVDVLCLQEVQESHYHDFFLPELQKLGYE 72 >gi|194882717|ref|XP_001975457.1| GG22325 [Drosophila erecta] gi|190658644|gb|EDV55857.1| GG22325 [Drosophila erecta] Length = 1504 Score = 37.8 bits (86), Expect = 1.6, Method: Composition-based stats. Identities = 12/160 (7%), Positives = 37/160 (23%), Gaps = 2/160 (1%) Query: 34 CLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR 93 CL E K ++ + ++S + + I + Sbjct: 1013 CLGEIKCQNNATCIDGVESYKCECQPGFTGEFCDTKIQFCSPEFNPCANGAKCIDHFTHY 1072 Query: 94 FIEATFTINTQTLR--IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFA 151 + + I + + + + + E + Sbjct: 1073 SCDCQAGFHGTNCTDNIDDCQNHMCQNGGTCVDGINDYQCRCPDDYTGKYCEGHNMISMM 1132 Query: 152 GDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191 Q H+C + + ++ +A + + + Sbjct: 1133 YPQTSPCQNHECKHGVCFQPNAQGSDYLCRCHPGYTGKWC 1172 >gi|163737422|ref|ZP_02144839.1| Endonuclease/exonuclease/phosphatase [Phaeobacter gallaeciensis BS107] gi|161388948|gb|EDQ13300.1| Endonuclease/exonuclease/phosphatase [Phaeobacter gallaeciensis BS107] Length = 331 Score = 37.8 bits (86), Expect = 1.6, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 21/53 (39%), Gaps = 12/53 (22%) Query: 223 IDHIMLSPEATSLLHSARI-----------DTKPR-GWTKPSDHTPVIVSLDI 263 +D+IM+S + RI D R SDH PV + LD+ Sbjct: 278 LDYIMVSSGLRQPAANWRIWHPFEDAACYEDVALREALLAASDHFPVSLDLDL 330 >gi|292491294|ref|YP_003526733.1| endonuclease/exonuclease/phosphatase [Nitrosococcus halophilus Nc4] gi|291579889|gb|ADE14346.1| Endonuclease/exonuclease/phosphatase [Nitrosococcus halophilus Nc4] Length = 226 Score = 37.8 bits (86), Expect = 1.6, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 21/43 (48%), Gaps = 11/43 (25%) Query: 4 VTVATWNVNSIR--------ARIHNLAAWIKENNPDIICLQET 38 + + T+N++S R AR A+ ++ D++ LQE Sbjct: 1 MRLVTYNISSCRGTDRCFNPART---ASVLRSLKADVLALQEV 40 >gi|260591557|ref|ZP_05857015.1| endonuclease/Exonuclease/phosphatase family protein [Prevotella veroralis F0319] gi|260536588|gb|EEX19205.1| endonuclease/Exonuclease/phosphatase family protein [Prevotella veroralis F0319] Length = 326 Score = 37.8 bits (86), Expect = 1.6, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 23/63 (36%), Gaps = 21/63 (33%) Query: 223 IDHIMLSPEATSLLHSARIDTKP---------------------RGWTKPSDHTPVIVSL 261 +D I++S S + S I+ P R SDH P+++ + Sbjct: 264 LDQILISENLRSYVLSCHINDAPFLLEEDIKYGGVKPRRDYNGMRYNNGFSDHLPLVLQM 323 Query: 262 DIP 264 IP Sbjct: 324 AIP 326 >gi|285017645|ref|YP_003375356.1| hypothetical protein XALc_0850 [Xanthomonas albilineans GPE PC73] gi|283472863|emb|CBA15368.1| conserved hypothetical protein [Xanthomonas albilineans] Length = 255 Score = 37.8 bits (86), Expect = 1.6, Method: Composition-based stats. Identities = 15/96 (15%), Positives = 27/96 (28%), Gaps = 14/96 (14%) Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 +A + + + R + +F + IDHI+LS Sbjct: 170 HPNAILMGDFNCVADRPEMQLLYQRTRLQPPACVVPTFPSWRPQ-------RAIDHILLS 222 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 H A SDH + + +P+ Sbjct: 223 DSLRCNAHRAV-------PAAFSDHLALTTEIQVPQ 251 >gi|169625216|ref|XP_001806012.1| hypothetical protein SNOG_15875 [Phaeosphaeria nodorum SN15] gi|111055593|gb|EAT76713.1| hypothetical protein SNOG_15875 [Phaeosphaeria nodorum SN15] Length = 464 Score = 37.8 bits (86), Expect = 1.6, Method: Composition-based stats. Identities = 22/171 (12%), Positives = 42/171 (24%), Gaps = 14/171 (8%) Query: 2 SVVTVATWNVNSIR-------ARIHNLAAWIKENNP--DIICLQETKT-EDKNFPFET-- 49 S + + + N ++ R+ +A I +P DI+ LQE T +D N E Sbjct: 8 SSIRILSLNCWGLKYIATLRNERLTEIANQIAAADPRPDIVGLQECWTQQDYNVIREKTN 67 Query: 50 -LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ-TLR 107 + + + +V + R +R Sbjct: 68 SFLPYGKFYHSGIFGGGLAILSKWPLEESNMVRYPLNGRPAAFYRGDWFVGKGVACARIR 127 Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP 158 IG + + + E + G Sbjct: 128 IGPGRRDIAEVFCTHLHAPYETEPHDSYICHRTAQAWEITKLMRGAAERGH 178 >gi|325696374|gb|EGD38265.1| RgfB protein [Streptococcus sanguinis SK160] Length = 271 Score = 37.8 bits (86), Expect = 1.6, Method: Composition-based stats. Identities = 28/250 (11%), Positives = 64/250 (25%), Gaps = 21/250 (8%) Query: 18 IHNLAAWIKENNPDIICLQETK--TEDKNFPFETLQSL--NYHIETCGQKSYNGV---AI 70 ++ LA I + D+ICLQE TE + + V A Sbjct: 21 LNELAERILQEKYDVICLQEVNQLTESEQVVQAPFYQAVEGAIAIHQDHFALCLVEKLAE 80 Query: 71 LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISW 130 + G D+ + I + + + + + + P + Sbjct: 81 AGLDYHWSWAYNHIGFDIYNEGVAILSRNPMAPREVLVSEVNDPRDYHTRKVLLAETEVE 140 Query: 131 IK------RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ 184 + L + + + E + A + + + + + Sbjct: 141 GQLLTIASCHLSWWDKGFQGEWAKLEAELLKVKTPLVLMGDFNNPVGQQGYQTILASPLK 200 Query: 185 KLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK 244 + + WD ++ID++ S + + + Sbjct: 201 LQDSHAVAREAIGEATVEGTIAGWD------DNKHALKIDYVFTSQGMD--VERSAVVFD 252 Query: 245 PRGWTKPSDH 254 + SDH Sbjct: 253 GKETPVVSDH 262 >gi|229189268|ref|ZP_04316289.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus ATCC 10876] gi|228594168|gb|EEK51966.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus ATCC 10876] Length = 788 Score = 37.8 bits (86), Expect = 1.6, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%) Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263 +DHI+++ ++ I + + SDH PV+ +D+ Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---QGRVSDHDPVLAQIDL 784 >gi|289768186|ref|ZP_06527564.1| conserved hypothetical protein [Streptomyces lividans TK24] gi|289698385|gb|EFD65814.1| conserved hypothetical protein [Streptomyces lividans TK24] Length = 293 Score = 37.8 bits (86), Expect = 1.7, Method: Composition-based stats. Identities = 10/50 (20%), Positives = 20/50 (40%), Gaps = 6/50 (12%) Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271 RID++ + + + +P SDH PV+ + +P + Sbjct: 250 RIDYVTAGKDV--RIRRTAVPEEP----AASDHRPVVADVSLPRRTPGRD 293 >gi|256784304|ref|ZP_05522735.1| hypothetical protein SlivT_07438 [Streptomyces lividans TK24] Length = 276 Score = 37.8 bits (86), Expect = 1.7, Method: Composition-based stats. Identities = 10/50 (20%), Positives = 20/50 (40%), Gaps = 6/50 (12%) Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271 RID++ + + + +P SDH PV+ + +P + Sbjct: 233 RIDYVTAGKDV--RIRRTAVPEEP----AASDHRPVVADVSLPRRTPGRD 276 >gi|21224501|ref|NP_630280.1| hypothetical protein SCO6176 [Streptomyces coelicolor A3(2)] gi|4008541|emb|CAA22510.1| conserved hypothetical protein [Streptomyces coelicolor A3(2)] Length = 276 Score = 37.8 bits (86), Expect = 1.7, Method: Composition-based stats. Identities = 10/50 (20%), Positives = 20/50 (40%), Gaps = 6/50 (12%) Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271 RID++ + + + +P SDH PV+ + +P + Sbjct: 233 RIDYVTAGKDV--RIRRTAVPEEP----AASDHRPVVADVSLPRRTPGRD 276 >gi|332141756|ref|YP_004427494.1| extracellular ribonuclease/nuclease fusion protein [Alteromonas macleodii str. 'Deep ecotype'] gi|327551778|gb|AEA98496.1| extracellular ribonuclease/nuclease fusion protein [Alteromonas macleodii str. 'Deep ecotype'] Length = 1346 Score = 37.8 bits (86), Expect = 1.7, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 33/98 (33%), Gaps = 31/98 (31%) Query: 192 TDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT----KPR- 246 + D YS+ S+ G +DH + SP T + A + +PR Sbjct: 1194 YSNLVNFFDGDSAYSY------SFGGEMGY-LDHALSSPSLTEYVVDATVWHINADEPRV 1246 Query: 247 -------------------GWTKPSDHTPVIVSLDIPE 265 + SDH PV+V L+ PE Sbjct: 1247 FDYNVEFKSETQLSSYYGADAYRSSDHDPVVVVLNFPE 1284 >gi|332184870|gb|AEE27124.1| hypothetical protein FN3523_1821 [Francisella cf. novicida 3523] Length = 239 Score = 37.8 bits (86), Expect = 1.7, Method: Composition-based stats. Identities = 45/247 (18%), Positives = 76/247 (30%), Gaps = 48/247 (19%) Query: 21 LAAWIKEN----NPDIICLQE-TKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75 A+I+ N DI CLQE D FP + +N+ + GVA +S + Sbjct: 32 FKAYIRHTYFNYNVDIFCLQEAVHQHDTKFPIDKF-DINFASNIVLRSHNYGVATVSHFP 90 Query: 76 PIEIVTHLPGDDLDVQARFIEATFTI-NTQTLRIGNLYLPHGNPITSTKYDDKISWIKRF 134 I+ V L V + T N ++ + + N ++ Y+ + IK F Sbjct: 91 VIKNVKILTTHRESVINTHKASLITHLNINNTKVIVVNIHAINFKSNKVYEYEFEKIKEF 150 Query: 135 LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDA 194 + + + II + +N + F E + + Sbjct: 151 IAPEKYKHPI-----------IIAGDFNTWNRKRVKLIKDFCREFCFKVAFIDEPQLVKS 199 Query: 195 IRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDH 254 + H LY +G+ L A + K SDH Sbjct: 200 FQNNHLDFVLY-------------RGL-------------NLEKAAVLD----CKKISDH 229 Query: 255 TPVIVSL 261 P+I Sbjct: 230 NPIIAEF 236 >gi|309362229|emb|CAP28348.2| hypothetical protein CBG_08683 [Caenorhabditis briggsae AF16] Length = 320 Score = 37.8 bits (86), Expect = 1.7, Method: Composition-based stats. Identities = 39/299 (13%), Positives = 77/299 (25%), Gaps = 53/299 (17%) Query: 4 VTVATWNV--------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55 + + T+N+ N + ++ NPDI+ LQET N L + Sbjct: 31 IRLMTFNIWQSGKNVENGQQKIAKHILMV----NPDIVALQETYA---NVTKNLTMMLGH 83 Query: 56 -HIETCGQKSYNGVAILSKYQP---------------IEIVTHLPGDDLDVQARFIEATF 99 + Y AIL+++ I + T + + Sbjct: 84 PWVAVERNHEYPDTAILTRHVIVPNTNLSTSGGVGVKIMLRTGYMVHFWSLHLDYTSYGP 143 Query: 100 TINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYN-IIP 158 L + G + + + + P+ AGD+N Sbjct: 144 YAANNKLVNRIDQILAGENTEYGRGPQIYEILTLPMMKKWMEKSDDVPIFIAGDFNGPSH 203 Query: 159 QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF---------WD 209 I + ++ + + + + ++ W+ Sbjct: 204 LDWTEQTKKIHGDWVIRWPATKELEDRGFTDTYREIYPNVLTNPGI-TWSTVNKFNPEWN 262 Query: 210 YYADSWSKNKGIRIDHIML-SPEATSLLHS-ARIDTKPR-----GWTKPSDHTPVIVSL 261 Y RID + P + + + + R PSDH V Sbjct: 263 YTIPEPQD----RIDFLFYKGPVVADQIMAYSGCEKPKRIPFHEHNDYPSDHFAVFADY 317 >gi|254587306|emb|CAX83710.1| endonuclease-reverse transcriptase [Schistosoma japonicum] Length = 1007 Score = 37.8 bits (86), Expect = 1.7, Method: Composition-based stats. Identities = 42/265 (15%), Positives = 78/265 (29%), Gaps = 23/265 (8%) Query: 6 VATWNVNSIRARIH-----NLAAWIKENNPDIICLQETK-TEDKNFPFETLQSLNYH-IE 58 + TWNV R +AA +K N ++ + ET T+ T + L Y E Sbjct: 29 IGTWNV---RTMWETGKTSQIAAEMKRYNLTVLGISETHWTQTGQKTLATGEVLLYSGHE 85 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 GVA++ + + + + T + GN Sbjct: 86 EENAPHTQGVALMLSKKARNALVGWEPHGPRIIKASFKTMKKGITMNIIQCYAPTNDGND 145 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 ++ D++ I + + + G N + + N Sbjct: 146 EDKDQFYDRLQSIIAKCPGKDLTILMGDLNAKVGMDNTGYEDIMGRKGLGERNQNGERFT 205 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 +F K+ H H ++ + ++ IDHI ++ S Sbjct: 206 NLCAFNKM----VIGGTIFPHKRIHKVTWVSPDHTTENQ-----IDHICINR----KFRS 252 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263 RG SDH V+ + + Sbjct: 253 TEDVRNRRGADIASDHHLVVAKMKL 277 >gi|255554853|ref|XP_002518464.1| hydrolase, putative [Ricinus communis] gi|223542309|gb|EEF43851.1| hydrolase, putative [Ricinus communis] Length = 429 Score = 37.8 bits (86), Expect = 1.7, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 7/41 (17%) Query: 2 SVVTVATWNVNSIR------ARIHNLAAWIKENNPDIICLQ 36 S + ++NV R R+ L I+ ++PD+IC Q Sbjct: 165 SSFKILSYNVW-FREALEVHKRMKALGDIIQLHSPDVICFQ 204 >gi|28973671|gb|AAO64154.1| unknown protein [Arabidopsis thaliana] gi|29824267|gb|AAP04094.1| unknown protein [Arabidopsis thaliana] gi|110737063|dbj|BAF00485.1| hypothetical protein [Arabidopsis thaliana] Length = 321 Score = 37.8 bits (86), Expect = 1.7, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 19/52 (36%), Gaps = 13/52 (25%) Query: 223 IDHIMLSPEATSLLHSARID-------TKPRGWT----KPSDHTPVIVSLDI 263 +D+I +SP + I G+ PSDH P+ +I Sbjct: 269 LDYIFISPS--DFIKPVSILQLPEPDSPDVVGFLPNHHHPSDHLPIGAEFEI 318 Score = 37.8 bits (86), Expect = 1.7, Method: Composition-based stats. Identities = 9/24 (37%), Positives = 13/24 (54%) Query: 15 RARIHNLAAWIKENNPDIICLQET 38 +AR H + + +K D CLQE Sbjct: 25 KARSHAILSVLKNLQADFFCLQEV 48 >gi|321449469|gb|EFX61903.1| hypothetical protein DAPPUDRAFT_302699 [Daphnia pulex] Length = 460 Score = 37.8 bits (86), Expect = 1.7, Method: Composition-based stats. Identities = 9/30 (30%), Positives = 16/30 (53%), Gaps = 5/30 (16%) Query: 9 WNVNSIRARIHNLAAWIKENNPDIICLQET 38 WN +R + +++N D++CLQE Sbjct: 113 WN-----SRAERILREVRDNQADVLCLQEV 137 >gi|298204363|gb|ADI61830.1| endonuclease-reverse transcriptase [Bombyx mori] Length = 1245 Score = 37.8 bits (86), Expect = 1.7, Method: Composition-based stats. Identities = 36/280 (12%), Positives = 84/280 (30%), Gaps = 25/280 (8%) Query: 6 VATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 VAT+NV ++ R+ L +K D++ L E + +++ + I + Sbjct: 308 VATYNVRTLSTSHRLIELIDSLKNTTYDVVGLSEVR-----RVGTSVREYDDFIFCYKGE 362 Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 + + + + R +N L I +Y P Sbjct: 363 TRGIIWCWLLLYRNNLQKKTSSVLNGISERVALLKLNLNGYQLNILQVYAPTEASNEDEV 422 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + + + + + + G+ P+P + R Sbjct: 423 ERFYDTINETLRKTGKNIIVMGDFNSKIGN----PRPEESLIMKNHGYGVRNNRGERLID 478 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 +N + +++ + +KN+ ID+I+ + + ++ Sbjct: 479 FAYENKLSITNTFFKKPKNLRWTWRSPDGN--TKNE---IDYILT--NLDKNVLNVQVLN 531 Query: 244 KPRGWTKPSDHTPVIVSL---DIPEPRKKQQDSTSQNMKP 280 P+DH V + I + R K + + +K Sbjct: 532 VI----FPTDHRLVRATFILQKITKSRAKYTNCLGKTLKT 567 >gi|92116447|ref|YP_576176.1| endonuclease/exonuclease/phosphatase [Nitrobacter hamburgensis X14] gi|91799341|gb|ABE61716.1| Endonuclease/exonuclease/phosphatase [Nitrobacter hamburgensis X14] Length = 292 Score = 37.8 bits (86), Expect = 1.7, Method: Composition-based stats. Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 5/37 (13%) Query: 6 VATWNVN-SI-RARI---HNLAAWIKENNPDIICLQE 37 +A++N++ + R R H IKE PDII LQE Sbjct: 49 IASYNIHKGVGRDRRFDPHRTVRVIKEIQPDIIALQE 85 >gi|5597017|gb|AAC24982.2| reverse transcriptase [synthetic construct] Length = 1016 Score = 37.8 bits (86), Expect = 1.7, Method: Composition-based stats. Identities = 39/283 (13%), Positives = 79/283 (27%), Gaps = 39/283 (13%) Query: 5 TVATWNVNS---IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 +A++NV + IR ++ LA ++ N D+ CL ET+ +D E LQ + + + Sbjct: 20 KLASFNVRTLMQIRQQM-GLAMSLESLNVDVCCLSETRIQDS---SEVLQIRSPSVASKS 75 Query: 62 QKSY--------------------NGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI 101 + A + I I + L L+ + Sbjct: 76 LFHVRLSGDPVASSSGLAGVGVALSARAEAALIDWIPINSRLCAVRLESSIKVRRNRREK 135 Query: 102 NTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161 + ++ +++ + + R + + G Sbjct: 136 RCLFVISAYAPTDCSPDAIKDEFYHQLTVLLQKARSTDIVVLAGDLNAQVGRLGT---EE 192 Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYA-DSWSKNKG 220 R + F + H ++ A +W++ Sbjct: 193 SRLGGRWGLVGRRTDNGDRLLQLCTDHNLFLASTNFRHSHRRCATWRPPSASQAWTQ--- 249 Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 IDHI +S + SDH V +L + Sbjct: 250 --IDHIAISYRWRGCVQDC---RSFWSTYLESDHALVCANLTL 287 >gi|147845298|emb|CAN83372.1| hypothetical protein VITISV_034945 [Vitis vinifera] Length = 1471 Score = 37.8 bits (86), Expect = 1.7, Method: Composition-based stats. Identities = 8/59 (13%), Positives = 21/59 (35%), Gaps = 7/59 (11%) Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 ++S+ + + R+D +++ + R SDH P+++ Sbjct: 984 QGGVFSW----SRGRNNQSWARLDRFLVTQNWLDHFSGVV---QSRLPRPTSDHFPILL 1035 >gi|118361193|ref|XP_001013827.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena thermophila] gi|89295594|gb|EAR93582.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena thermophila SB210] Length = 279 Score = 37.8 bits (86), Expect = 1.7, Method: Composition-based stats. Identities = 22/95 (23%), Positives = 32/95 (33%), Gaps = 17/95 (17%) Query: 4 VTVATWNVNSIRARIHNLAA-------WIKENNPDIICLQETKTEDKNFPFETLQS---- 52 + ++NV HN + +PD ICLQE T+D F Sbjct: 36 LKFISYNVW---FEKHNFEERNIELRKIFLQFDPDFICLQEV-TQD--FLQLIFSDDQIC 89 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDD 87 Y+ + V ILSKY + P + Sbjct: 90 DKYYFSSSSLVQAYDVLILSKYPIPFKCRYFPSEM 124 >gi|239834270|ref|ZP_04682598.1| ATPase-like protein [Ochrobactrum intermedium LMG 3301] gi|239822333|gb|EEQ93902.1| ATPase-like protein [Ochrobactrum intermedium LMG 3301] Length = 727 Score = 37.8 bits (86), Expect = 1.7, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 20/54 (37%) Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 LS + RG T+P DH PV+ P + + T + + I Sbjct: 601 LSHRLDWRHIESVALGNGRGLTQPQDHAPVVTEWHWPSSEEVAEGLTDEQKEAI 654 >gi|220907814|ref|YP_002483125.1| Endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 7425] gi|219864425|gb|ACL44764.1| Endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 7425] Length = 647 Score = 37.8 bits (86), Expect = 1.7, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 24/65 (36%), Gaps = 7/65 (10%) Query: 200 DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 YS+ + ++ +DH+++S + T+ SDH P + Sbjct: 590 PEVERYSYV-FQGNAQE------LDHVLVSSALQPRAQFDIVHLNAEFHTQLSDHDPCVA 642 Query: 260 SLDIP 264 L +P Sbjct: 643 RLLLP 647 >gi|47227637|emb|CAG09634.1| unnamed protein product [Tetraodon nigroviridis] Length = 553 Score = 37.8 bits (86), Expect = 1.7, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 27/88 (30%), Gaps = 5/88 (5%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKN---FPFETLQSLNYHIETCGQKSYNGVAILSK 73 R + I + DII LQE E + ETL+ Y C + V+ + Sbjct: 215 RKKGIMEEITNCDADIISLQEV--ETEQYYTLFLETLKERGYDGYFCPKSRAKLVSEQER 272 Query: 74 YQPIEIVTHLPGDDLDVQARFIEATFTI 101 + + + + + Sbjct: 273 KHVEGCASFFKTEKFTLVQKHTVEFNQV 300 >gi|170782608|ref|YP_001710942.1| hypothetical protein CMS_2268 [Clavibacter michiganensis subsp. sepedonicus] gi|169157178|emb|CAQ02359.1| conserved hypothetical protein [Clavibacter michiganensis subsp. sepedonicus] Length = 273 Score = 37.8 bits (86), Expect = 1.7, Method: Composition-based stats. Identities = 33/247 (13%), Positives = 66/247 (26%), Gaps = 24/247 (9%) Query: 17 RIHNLAAWIKENNPDIICLQE-----TKTEDKNFPFETLQSLNYHIETCGQKSYNGVAIL 71 R L ++++ P ++ +QE + +K P + + E + + Sbjct: 38 RQEVLTRFLQQERPTVLGVQEALWPQIQAIEKALPPS-YRMVGQGREGGSHGEHGAIFY- 95 Query: 72 SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWI 131 + + ++ H D T+ + + D + Sbjct: 96 -QASRLTLLEHDVMWLSDTPDVIGSMTWGNPMPRILTWARFQDEATGHPLVVLDTHLDHD 154 Query: 132 KRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191 R + E ++ + DA + Sbjct: 155 VAEARDRAAEAIAELVRTRFAGLPLVLMGDFNAPVDSFPYDALTRRAGLRDSWLDTARQA 214 Query: 192 TDAIRATHDTHHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTK 250 T A +F DY G RID I++S + +A ++ Sbjct: 215 TPAFG---------TFPDYR----PPVVGAPRIDWILVSERVD--VRAAAVNDFTWRGRM 259 Query: 251 PSDHTPV 257 SDH PV Sbjct: 260 MSDHLPV 266 >gi|322797498|gb|EFZ19553.1| hypothetical protein SINV_12060 [Solenopsis invicta] Length = 227 Score = 37.8 bits (86), Expect = 1.8, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 2/43 (4%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKN 44 + + WNV I + +I N DII L ET EDK Sbjct: 174 RKLKIIFWNVAGINNKDEEFWEYIG--NFDIINLTETWIEDKK 214 >gi|319954984|ref|YP_004166251.1| endonuclease i [Cellulophaga algicola DSM 14237] gi|319423644|gb|ADV50753.1| Endonuclease I [Cellulophaga algicola DSM 14237] Length = 1976 Score = 37.8 bits (86), Expect = 1.8, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 22/58 (37%), Gaps = 8/58 (13%) Query: 209 DYYADSWSKNKGIRIDHIMLSPEATSLLHSARI-----DTKPRGWTKPSDHTPVIVSL 261 DY + + +N IDHI +S E ++ + T SDH PV Sbjct: 1629 DYRSYVFRENM---IDHITVSNELSASYIDGSVSVGYEFYDTDYTTTVSDHFPVSARF 1683 >gi|20513185|emb|CAC85650.1| reverse transcriptase [Yarrowia lipolytica] Length = 1300 Score = 37.8 bits (86), Expect = 1.8, Method: Composition-based stats. Identities = 33/262 (12%), Positives = 71/262 (27%), Gaps = 15/262 (5%) Query: 4 VTVATWNVNSIRAR--IHNLAAWI-----KENNPDIICLQETKTEDKNF-PFETLQSLNY 55 V V T N+ + ++ L I + PD++ LQET D + + + S + Sbjct: 26 VKVITANIGGFKMAEALNRLPDTIVNIIRTTHYPDLVLLQETNWVDSSLQTAQQIISNSP 85 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + A +S + + + E ++ + Sbjct: 86 YPGGRHYTLLGSTAGVSNRSVGVGLVYSDNVTITNFTTVFEYFPALDNRLCLADVHIKGT 145 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 ++ L++ L + D + Sbjct: 146 DRHLSLINVYAPNEQGASPFTNRQFYQSLDDYLRLQPCQYPLIAAGDWNAVASNDGRIGE 205 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 + + LY+ + + G R+D + +S + Sbjct: 206 KVTTHLKDFLANWDLLDTYTLISKHRKGLYTHTNNSRGA-----GRRLDQLHISSTLSQW 260 Query: 236 LHSARIDTKPRGW--TKPSDHT 255 + S ++ T +G TK S H Sbjct: 261 IKSTQLVTNKQGHNITKSSHHA 282 >gi|326779823|ref|ZP_08239088.1| Endonuclease/exonuclease/phosphatase [Streptomyces cf. griseus XylebKG-1] gi|326660156|gb|EGE45002.1| Endonuclease/exonuclease/phosphatase [Streptomyces cf. griseus XylebKG-1] Length = 260 Score = 37.8 bits (86), Expect = 1.8, Method: Composition-based stats. Identities = 14/36 (38%), Positives = 21/36 (58%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQE 37 +V+ V ++NV S+R LA I PD+I +QE Sbjct: 17 AVIRVLSYNVRSLRDDTAALARVIHACAPDLILVQE 52 >gi|147792016|emb|CAN70844.1| hypothetical protein VITISV_007637 [Vitis vinifera] Length = 1676 Score = 37.8 bits (86), Expect = 1.8, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 14/22 (63%) Query: 21 LAAWIKENNPDIICLQETKTED 42 + IK D++C+QETK ++ Sbjct: 610 IKDVIKSQKVDLVCIQETKIQE 631 >gi|67625701|tpe|CAJ00236.1| TPA: endonuclease-reverse transcriptase [Schistosoma mansoni] Length = 992 Score = 37.8 bits (86), Expect = 1.8, Method: Composition-based stats. Identities = 36/265 (13%), Positives = 81/265 (30%), Gaps = 22/265 (8%) Query: 6 VATWNVNSIRA-----RIHNLAAWIKENNPDIICLQETK-TEDKNFPFETLQSLNYH-IE 58 + TWNV R R+ ++A +++ N +++ + ET T+ + + L Y E Sbjct: 15 IGTWNV---RTMWETGRVFQISAEMRKYNLEVLGISETHWTQVGQQRLSSGELLLYSGHE 71 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 GVA++ + + + + T + + Sbjct: 72 EENAPHTQGVALMLSRKAQNALIGWESHGPRIIKASFKTKREGITMNIIQCYAPTNDYDE 131 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 ++ D++ I + + + G N + Sbjct: 132 DAKNQFYDRLQSIFEKCPTKDLTILMGDFNAKVGKDNTGYED----VMGQHGLGGRNENG 187 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 R + N H H ++ D ++N+ IDH+ ++ + + Sbjct: 188 DRFANLCAFNKLVIGGTIFPHRNIHKATWIS--PDHTTQNQ---IDHVCINKKFRRTMED 242 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263 RG SDH ++ + + Sbjct: 243 V---RTRRGADIASDHHLLVAKMKL 264 >gi|91793693|ref|YP_563344.1| endonuclease/exonuclease/phosphatase [Shewanella denitrificans OS217] gi|91715695|gb|ABE55621.1| Endonuclease/exonuclease/phosphatase [Shewanella denitrificans OS217] Length = 475 Score = 37.8 bits (86), Expect = 1.8, Method: Composition-based stats. Identities = 41/281 (14%), Positives = 80/281 (28%), Gaps = 43/281 (15%) Query: 2 SVVTVATWNV------NS-IRARIHNLAAWIKENNPDIICLQETKTE-DKNFPFETLQSL 53 + +TV T+N+ S I R+ L ++ + D++ LQE F Q Sbjct: 203 NSLTVMTYNIWALPVIASHINERLALLPQKMRGH--DVLMLQEVFAPGRGAFLRALAQEY 260 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113 Y + N + + I Sbjct: 261 PYQTRMLDKSGVNIYDGGVMIVSRYPIVAQAQFVYPDCSGTDCFADKGINYAQVIKQGE- 319 Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + + + ++++ + ++ FA I Y N Sbjct: 320 ------AYHVFATHTASFDTDVARSNRQKQFKQMREFAHSLAIPADETVIYGGDFNVNKR 373 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY--SFWDYYADSWS-------KNKGIRID 224 F + ++A ++ Y S +D + ++ +N +D Sbjct: 374 KFEDDY---------QQMFANLKAKQPSYSGYIESTFDPRINEFAGTPLSGGENVEY-LD 423 Query: 225 HIMLSPEATSLLHSARIDTKPRG-----WTKP--SDHTPVI 258 +I++S E + PR W K SDH PV+ Sbjct: 424 YIVISDEYAQTQSNDNDVKVPRSSAASLWQKWNLSDHFPVV 464 >gi|56696006|ref|YP_166360.1| endonuclease/exonuclease/phosphatase family protein [Ruegeria pomeroyi DSS-3] gi|56677743|gb|AAV94409.1| endonuclease/exonuclease/phosphatase family protein [Ruegeria pomeroyi DSS-3] Length = 337 Score = 37.8 bits (86), Expect = 1.8, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 22/53 (41%), Gaps = 12/53 (22%) Query: 223 IDHIMLSPEATSLLHSARIDT-----------KPR-GWTKPSDHTPVIVSLDI 263 +D++M+S + + RI + R SDH PV + +DI Sbjct: 285 LDYVMISKGLMARRPAWRIWHPFDDAECWQMVELREALLTASDHFPVTLDIDI 337 >gi|260589681|ref|ZP_05855594.1| putative hyaluronidase [Blautia hansenii DSM 20583] gi|260539921|gb|EEX20490.1| putative hyaluronidase [Blautia hansenii DSM 20583] Length = 1828 Score = 37.8 bits (86), Expect = 1.8, Method: Composition-based stats. Identities = 4/144 (2%), Positives = 26/144 (18%), Gaps = 3/144 (2%) Query: 78 EIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF 137 + T ++ + ++ + + + + + Sbjct: 1654 WLYTGNHWYYMNDNGIMVTGWAAVDGHWYYMDQWGAMCTGWVAADGHWYYMDQWGAMCTG 1713 Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA 197 + ++ + + + + + + Sbjct: 1714 ---WVAVDGHWYYMDQWGAMCIGWVLVGDTWYYMNGSGAMCTGWVAADGHWYYMDQWGAM 1770 Query: 198 THDTHHLYSFWDYYADSWSKNKGI 221 + W Y + G Sbjct: 1771 CTGWVVVDGHWYYMDQWGAMRTGW 1794 >gi|190892922|ref|YP_001979464.1| hypothetical protein RHECIAT_CH0003338 [Rhizobium etli CIAT 652] gi|190698201|gb|ACE92286.1| hypothetical protein RHECIAT_CH0003338 [Rhizobium etli CIAT 652] Length = 357 Score = 37.8 bits (86), Expect = 1.8, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 20/47 (42%), Gaps = 14/47 (29%) Query: 5 TVATWNV-N-----S--IR------ARIHNLAAWIKENNPDIICLQE 37 +A+WN+ N +R A ++ + PD++ LQE Sbjct: 26 KLASWNIGNLASKPGVPLRGHARDEAEYQHIRDIFAKLEPDVVALQE 72 >gi|256088084|ref|XP_002580189.1| carbon catabolite repressor protein [Schistosoma mansoni] gi|238665702|emb|CAZ36428.1| carbon catabolite repressor protein, putative [Schistosoma mansoni] Length = 658 Score = 37.8 bits (86), Expect = 1.8, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 32/92 (34%), Gaps = 3/92 (3%) Query: 17 RIHNLAAWIKENNPDIICLQETKTE--DKNFPFETLQSLNYHIETCGQKSYNGVAILSKY 74 R + I+ + +IICLQE +T+ ++ F E LQ LNY + + + Sbjct: 246 RRRAILDEIRIYHANIICLQELRTDHFEEVFKPE-LQKLNYDAVFLPKSRRRTMELKESK 304 Query: 75 QPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 + + + F T Sbjct: 305 KVDGCAIFWQTNKFEKLHEFHHEFMLSCTSMC 336 >gi|195429361|ref|XP_002062731.1| GK19542 [Drosophila willistoni] gi|194158816|gb|EDW73717.1| GK19542 [Drosophila willistoni] Length = 1514 Score = 37.8 bits (86), Expect = 1.8, Method: Composition-based stats. Identities = 18/160 (11%), Positives = 39/160 (24%), Gaps = 2/160 (1%) Query: 34 CLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR 93 CL ETK ++ + +QS + Y I Q + Sbjct: 1023 CLGETKCQNNATCIDGVQSYTCECQPGFTGEYCDTKIQFCSQEFNPCANGAKCMDHFTHY 1082 Query: 94 FIEATFTINTQTLR--IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFA 151 + + I + + K F + E + Sbjct: 1083 SCDCLAGFHGINCTDNIDDCQNHMCQNGGTCIDGINDYVCKCPDDFTGKYCEGHNMISMM 1142 Query: 152 GDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191 Q H+C + + ++ +A + + + Sbjct: 1143 YPQTSPCQNHECKHGVCFQPNAAGSDYLCKCHPGYTGKWC 1182 >gi|110288963|gb|AAP53315.2| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 1505 Score = 37.8 bits (86), Expect = 1.8, Method: Composition-based stats. Identities = 20/136 (14%), Positives = 43/136 (31%), Gaps = 13/136 (9%) Query: 134 FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW-----ENDACFTLEVRQSFQKLQN 188 L + P C ++ + + + ++ Sbjct: 391 CLYGDAHSETKHRTWTTMRGLIDNPTTPWLMAGDFNEILFSHEKQCGRMKAQSAMDEFRH 450 Query: 189 MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR--IDHIMLSPEATSLLHSARIDTKPR 246 + +++ S S+ IR +D + +PE ++ +AR+ Sbjct: 451 ALTDCGLDDLGFEGDAFTW---RNHSHSQEGYIREWLDRAVANPEWRAMFPAARVIN--- 504 Query: 247 GWTKPSDHTPVIVSLD 262 G + SDH PVI+ L+ Sbjct: 505 GDPRHSDHRPVIIELE 520 >gi|242003618|ref|XP_002422799.1| Skeletal muscle and kidney-enriched inositol phosphatase, putative [Pediculus humanus corporis] gi|212505657|gb|EEB10061.1| Skeletal muscle and kidney-enriched inositol phosphatase, putative [Pediculus humanus corporis] Length = 428 Score = 37.8 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 31/78 (39%), Gaps = 16/78 (20%) Query: 1 MSVVTV--ATWNVNSIRARIH---NLAAWI-----KENNPD--IICLQETKTEDKNFPFE 48 M + + ++NV A NL + +EN PD I+ LQE K + N + Sbjct: 1 MDSLRIYIVSYNV----ACKPPEENLEELLGFEKSEENLPDFYIVGLQEVKAQLYNIVLD 56 Query: 49 TLQSLNYHIETCGQKSYN 66 L + I KS N Sbjct: 57 ALLDDPWTIAFKQLKSKN 74 >gi|222615910|gb|EEE52042.1| hypothetical protein OsJ_33770 [Oryza sativa Japonica Group] Length = 222 Score = 37.8 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 10/56 (17%), Positives = 21/56 (37%), Gaps = 4/56 (7%) Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 +D + N +R+D + + A I + SDH P+ + ++ Sbjct: 48 YDNRREGR-NNVRVRLDRALADDNWRDIFSEAHI---VHLTSPCSDHCPIQLQFNM 99 >gi|50915043|ref|YP_061015.1| exodeoxyribonuclease III [Streptococcus pyogenes MGAS10394] gi|50904117|gb|AAT87832.1| Exodeoxyribonuclease III [Streptococcus pyogenes MGAS10394] Length = 294 Score = 37.8 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 35/274 (12%), Positives = 84/274 (30%), Gaps = 20/274 (7%) Query: 3 VVTVATWNVNSIRAR--IHNLAAW---IKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57 + V T N +S + L A I DIICLQE ++ E L + Sbjct: 23 MTKVLTLNTHSWMQANTLKKLVALAEHILAEKYDIICLQEI---NQLIESELATDLPRYQ 79 Query: 58 E-----TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 + + + + I + + + + E ++ Q + + ++ Sbjct: 80 ALSGTPSIHKDHFALLLIHYLQKRGQHYYWSWAYNHIGYDIYQEGVAILSKQPIHVSDIL 139 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLI---FAGDYNIIPQPHDCYNPIIW 169 + T+ + + + F G++ + + N + Sbjct: 140 VSAMADETNYHTRRSLIAKTTLDGKEVAVVNVHLSWFDKGFLGEWEKLEKELLTLNCPLL 199 Query: 170 ENDACFTLEVRQSFQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227 + +Q + + D+ + +S + +++DH+ Sbjct: 200 LMGDFNNPTDQDGYQVMMGSPLDLQDSHKVADHVFGDHSIVADIDGWQGNKEALKVDHVF 259 Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 S + + S++ + SDH + V+L Sbjct: 260 TSKDFI--IRSSKTTFEGGDAPVVSDHYGLEVTL 291 >gi|188989673|ref|YP_001901683.1| putative extracellular nuclease [Xanthomonas campestris pv. campestris str. B100] gi|167731433|emb|CAP49608.1| putative extracellular nuclease [Xanthomonas campestris pv. campestris] Length = 572 Score = 37.8 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 22/56 (39%), Gaps = 14/56 (25%) Query: 222 RIDHIMLSPEATSLLHSA---RIDTKPR-----------GWTKPSDHTPVIVSLDI 263 R+DH +LSP L A I+ G + SDH PV++ + Sbjct: 517 RLDHALLSPAMAKQLRGAAEWHINADAMDDAGYAKRNLPGPWRSSDHDPVLLGFAL 572 >gi|163749177|ref|ZP_02156427.1| hypothetical protein KT99_20089 [Shewanella benthica KT99] gi|161331247|gb|EDQ02136.1| hypothetical protein KT99_20089 [Shewanella benthica KT99] Length = 76 Score = 37.8 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 13/60 (21%) Query: 219 KGIRIDHIMLSPEATSL--LHSARIDTKP---RGWTKPS--------DHTPVIVSLDIPE 265 KG +D+I+LS E + L A + R PS DH PV+++L I E Sbjct: 17 KGSVLDYILLSSEFDAKNDLSLAEVGRYETYDRHLINPSFEHDSQSTDHAPVMITLAIRE 76 >gi|21229733|ref|NP_635650.1| nuclease [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66766610|ref|YP_241372.1| nuclease [Xanthomonas campestris pv. campestris str. 8004] gi|21111221|gb|AAM39574.1| nuclease [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66571942|gb|AAY47352.1| nuclease [Xanthomonas campestris pv. campestris str. 8004] Length = 606 Score = 37.8 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 22/56 (39%), Gaps = 14/56 (25%) Query: 222 RIDHIMLSPEATSLLHSA---RIDTKPR-----------GWTKPSDHTPVIVSLDI 263 R+DH +LSP L A I+ G + SDH PV++ + Sbjct: 551 RLDHALLSPAMAKQLRGAAEWHINADAMDDAGYAKRNLPGPWRSSDHDPVLLGFAL 606 >gi|83815707|ref|YP_446788.1| endonuclease/exonuclease/phosphatase family protein, putative [Salinibacter ruber DSM 13855] gi|83757101|gb|ABC45214.1| endonuclease/exonuclease/phosphatase family protein, putative [Salinibacter ruber DSM 13855] Length = 320 Score = 37.8 bits (86), Expect = 1.9, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 17/46 (36%), Gaps = 3/46 (6%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268 IDHI P+ + PSDH V +L +P K Sbjct: 262 IDHIFYPPQFFEAV---DTQRWCGRPAPPSDHCAVTAALRLPSRAK 304 >gi|320587729|gb|EFX00204.1| transcriptional effector [Grosmannia clavigera kw1407] Length = 693 Score = 37.5 bits (85), Expect = 1.9, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 29/105 (27%), Gaps = 21/105 (20%) Query: 4 VTVATWNVNSIR---------------A---RIHNLAAWIKENNPDIICLQE--TKTEDK 43 + V +WN+ R A R + I+ N D +CLQE T + Sbjct: 327 IKVFSWNILGERYATPQVFSYTPSGALAWDYRKEKIMDEIRYRNADFVCLQEITTDALRE 386 Query: 44 NFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDL 88 F E L +Y + + G Sbjct: 387 TFGPE-LAQADYRSIHYPRSKARTMTEKDAATVDGCAIFYKGSKF 430 >gi|242070283|ref|XP_002450418.1| hypothetical protein SORBIDRAFT_05g005061 [Sorghum bicolor] gi|241936261|gb|EES09406.1| hypothetical protein SORBIDRAFT_05g005061 [Sorghum bicolor] Length = 753 Score = 37.5 bits (85), Expect = 1.9, Method: Composition-based stats. Identities = 28/259 (10%), Positives = 66/259 (25%), Gaps = 33/259 (12%) Query: 4 VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + WN I A + L K+ P ++ + ET +++L Y + Sbjct: 1 MKTLCWNCRGIGNPATVKELRDLAKDYAPSVMFIMET-----QISKYRVENLRYTLSFDN 55 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 + N + + + + + I+ + +G P S Sbjct: 56 SFAVNSSG---RSGGLGLFWNNDVLLSIQKYSNYHIDTIISEHGKEPRRMSFIYGEPNRS 112 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDY-NIIPQPHDCYNPIIWENDACFTLEVR 180 +Y + + + + + P + Y + Sbjct: 113 FRYRTWDIMKQMRSDTDLPWVCMGDFNEILRREEQLGPNEREEYLMEGVRDAVDMCQLRD 172 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + L + + +R+D + S + A Sbjct: 173 IGYIGLDWTFEKKVA----------------GGHFVR---VRLDRALASVNWCARFPLAA 213 Query: 241 IDTKPRGWTKPSDHTPVIV 259 + SDH P+++ Sbjct: 214 VQH---LTAVKSDHCPILL 229 >gi|239995387|ref|ZP_04715911.1| extracellular ribonuclease/nuclease fusion protein [Alteromonas macleodii ATCC 27126] Length = 1097 Score = 37.5 bits (85), Expect = 1.9, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 26/73 (35%), Gaps = 24/73 (32%) Query: 223 IDHIMLSPEATSLLHSARIDT----KPR--------------------GWTKPSDHTPVI 258 +DH + S T + A + +PR + SDH PVI Sbjct: 964 LDHALSSSTLTEYVADATVWHINADEPRVFDYNVEYKSETQLSSYYGADAYRSSDHDPVI 1023 Query: 259 VSLDIPEPRKKQQ 271 V LD PE + + Sbjct: 1024 VVLDFPETSEPEP 1036 >gi|281350370|gb|EFB25954.1| hypothetical protein PANDA_019434 [Ailuropoda melanoleuca] Length = 96 Score = 37.5 bits (85), Expect = 1.9, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 31/91 (34%), Gaps = 10/91 (10%) Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 E+R L + FTD RA H Y+F + RIDHI+ Sbjct: 14 KQKINKEIRSLNDTLDQIDFTDIYRAFHPKATEYTFSSSAHGT-----CSRIDHILGRKL 68 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + I SDH+ + + L+ Sbjct: 69 HLNRYQKTGIIPCI-----FSDHSALKLELN 94 >gi|119946323|ref|YP_944003.1| endonuclease/exonuclease/phosphatase [Psychromonas ingrahamii 37] gi|119864927|gb|ABM04404.1| Endonuclease/exonuclease/phosphatase [Psychromonas ingrahamii 37] Length = 1010 Score = 37.5 bits (85), Expect = 1.9, Method: Composition-based stats. Identities = 19/106 (17%), Positives = 32/106 (30%), Gaps = 29/106 (27%) Query: 185 KLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA----- 239 ++ G+ + IR H H YS+ D +D+I+ S + + Sbjct: 751 MTESYGYANVIRDRHPESHSYSYNDEVGT---------LDYILASASLKDKIVDSMYWNI 801 Query: 240 ---------------RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQ 270 K + SDH P IV L+ + Sbjct: 802 NSSESSLFEYSTKYTGYLPKYDNAYRSSDHDPAIVVLNFADKSVTP 847 >gi|20092415|ref|NP_618490.1| hypothetical protein MA3615 [Methanosarcina acetivorans C2A] gi|19917671|gb|AAM06970.1| predicted protein [Methanosarcina acetivorans C2A] Length = 238 Score = 37.5 bits (85), Expect = 1.9, Method: Composition-based stats. Identities = 28/264 (10%), Positives = 71/264 (26%), Gaps = 28/264 (10%) Query: 1 MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60 M + + WN N I PD++ + + ++ Y Sbjct: 1 MLNMRIIAWNCN---MAFRKKYEQILPYEPDLL------VVPECEHPDKFKNKFYDDVLW 51 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 ++ N + + EI H + ++ + + + + Sbjct: 52 IGENRNKGLAVFSFNGFEIAIHESYCESYRYVLPVKVSHNREINLIAVWSQNNK--EDPG 109 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + + + + + ++ + + + + E+ Sbjct: 110 RRYIGEVWQSLNYYKDMFGSPTIIAGDFNWNVIWDSEHLKYPLHGTLADVINLLNRFEIS 169 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG--IRIDHIMLSPEATSLLHS 238 + + + F + LY + KN+ ID+I + + Sbjct: 170 SIYHTSKQVKFGNE-----KDPTLY---------FRKNRQTPYHIDYIFAPVDLINCRKP 215 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 K W SDH P+I ++ Sbjct: 216 VN-LGKYEDWISLSDHMPLIAEIE 238 >gi|229010475|ref|ZP_04167677.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides DSM 2048] gi|228750673|gb|EEM00497.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides DSM 2048] Length = 788 Score = 37.5 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 22/47 (46%), Gaps = 9/47 (19%) Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263 +DHI+++ ++ I + + SDH PV+V +D+ Sbjct: 741 LDHILVTNNIAPYTIVDPVHLNSNIMKE---HGRVSDHDPVLVQIDL 784 >gi|84516871|ref|ZP_01004229.1| hypothetical protein SKA53_06827 [Loktanella vestfoldensis SKA53] gi|84509339|gb|EAQ05798.1| hypothetical protein SKA53_06827 [Loktanella vestfoldensis SKA53] Length = 257 Score = 37.5 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 8/39 (20%), Positives = 18/39 (46%), Gaps = 5/39 (12%) Query: 4 VTVATWNVN---SIRARIH--NLAAWIKENNPDIICLQE 37 + +A++N+ + R + + + D+I LQE Sbjct: 29 LRLASYNIRKAKGVDGRYDPGRIVDILAGLDADVIALQE 67 >gi|296501782|ref|YP_003663482.1| endonuclease/exonuclease/phosphatase family protein [Bacillus thuringiensis BMB171] gi|296322834|gb|ADH05762.1| endonuclease/exonuclease/phosphatase family protein [Bacillus thuringiensis BMB171] Length = 788 Score = 37.5 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%) Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263 +DHI+++ ++ I + + SDH PV+ +D+ Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784 >gi|315497896|ref|YP_004086700.1| endonuclease/exonuclease/phosphatase [Asticcacaulis excentricus CB 48] gi|315415908|gb|ADU12549.1| Endonuclease/exonuclease/phosphatase [Asticcacaulis excentricus CB 48] Length = 315 Score = 37.5 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 15/85 (17%), Positives = 27/85 (31%), Gaps = 15/85 (17%) Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA-TSLLHSAR 240 + + + +++ A GI+IDH++ + L Sbjct: 245 LWSGSMEPLMRARMSWPAGSGLRHTWPTGRAL-----LGIQIDHVL-TKGLPAGRLT--- 295 Query: 241 IDTKPRGWTKPSDHTPVIVSLDIPE 265 + SDH PV L +PE Sbjct: 296 VLRHV-----GSDHLPVRADLVLPE 315 >gi|228904025|ref|ZP_04068131.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis IBL 4222] gi|228855621|gb|EEN00175.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis IBL 4222] Length = 792 Score = 37.5 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%) Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263 +DHI+++ ++ I + + SDH PV+ +D+ Sbjct: 745 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 788 >gi|228906812|ref|ZP_04070681.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis IBL 200] gi|228852816|gb|EEM97601.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis IBL 200] Length = 788 Score = 37.5 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%) Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263 +DHI+++ ++ I + + SDH PV+ +D+ Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784 >gi|228919906|ref|ZP_04083261.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228839722|gb|EEM85008.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 788 Score = 37.5 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%) Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263 +DHI+++ ++ I + + SDH PV+ +D+ Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784 >gi|228932469|ref|ZP_04095350.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228827159|gb|EEM72912.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 788 Score = 37.5 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%) Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263 +DHI+++ ++ I + + SDH PV+ +D+ Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784 >gi|228944800|ref|ZP_04107163.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228814828|gb|EEM61086.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 788 Score = 37.5 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%) Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263 +DHI+++ ++ I + + SDH PV+ +D+ Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784 >gi|228951535|ref|ZP_04113640.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228808100|gb|EEM54614.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 788 Score = 37.5 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%) Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263 +DHI+++ ++ I + + SDH PV+ +D+ Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784 >gi|228957450|ref|ZP_04119204.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar pakistani str. T13001] gi|228802204|gb|EEM49067.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar pakistani str. T13001] Length = 788 Score = 37.5 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%) Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263 +DHI+++ ++ I + + SDH PV+ +D+ Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784 >gi|228964133|ref|ZP_04125257.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar sotto str. T04001] gi|228795567|gb|EEM43050.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar sotto str. T04001] Length = 129 Score = 37.5 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%) Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263 +DHI+++ ++ I + + SDH PV+ +D+ Sbjct: 82 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 125 >gi|228938309|ref|ZP_04100922.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228971187|ref|ZP_04131818.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228977796|ref|ZP_04138180.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis Bt407] gi|228781906|gb|EEM30100.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis Bt407] gi|228788514|gb|EEM36462.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228821346|gb|EEM67358.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|326938818|gb|AEA14714.1| endonuclease/exonuclease/phosphatase family protein [Bacillus thuringiensis serovar chinensis CT-43] Length = 788 Score = 37.5 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%) Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263 +DHI+++ ++ I + + SDH PV+ +D+ Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784 >gi|228984258|ref|ZP_04144440.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228775545|gb|EEM23929.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 788 Score = 37.5 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%) Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263 +DHI+++ ++ I + + SDH PV+ +D+ Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784 >gi|229016371|ref|ZP_04173315.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1273] gi|229022601|ref|ZP_04179127.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1272] gi|228738692|gb|EEL89162.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1272] gi|228744927|gb|EEL94985.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1273] Length = 788 Score = 37.5 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%) Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263 +DHI+++ ++ I + + SDH PV+ +D+ Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784 >gi|229028860|ref|ZP_04184961.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1271] gi|228732431|gb|EEL83312.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1271] Length = 788 Score = 37.5 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%) Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263 +DHI+++ ++ I + + SDH PV+ +D+ Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784 >gi|229042920|ref|ZP_04190653.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH676] gi|228726385|gb|EEL77609.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH676] Length = 788 Score = 37.5 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%) Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263 +DHI+++ ++ I + + SDH PV+ +D+ Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784 >gi|229068731|ref|ZP_04202028.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus F65185] gi|228714348|gb|EEL66226.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus F65185] Length = 788 Score = 37.5 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%) Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263 +DHI+++ ++ I + + SDH PV+ +D+ Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784 >gi|229078378|ref|ZP_04210941.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock4-2] gi|228704919|gb|EEL57342.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock4-2] Length = 788 Score = 37.5 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%) Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263 +DHI+++ ++ I + + SDH PV+ +D+ Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784 >gi|229101774|ref|ZP_04232490.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-28] gi|228681641|gb|EEL35802.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-28] Length = 190 Score = 37.5 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%) Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263 +DHI+++ ++ I + + SDH PV+ +D+ Sbjct: 143 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 186 >gi|229108638|ref|ZP_04238249.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock1-15] gi|228674779|gb|EEL30012.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock1-15] Length = 788 Score = 37.5 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%) Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263 +DHI+++ ++ I + + SDH PV+ +D+ Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784 >gi|229120698|ref|ZP_04249941.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus 95/8201] gi|228662703|gb|EEL18300.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus 95/8201] Length = 788 Score = 37.5 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%) Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263 +DHI+++ ++ I + + SDH PV+ +D+ Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784 >gi|229126482|ref|ZP_04255496.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-Cer4] gi|228656871|gb|EEL12695.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-Cer4] Length = 788 Score = 37.5 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%) Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263 +DHI+++ ++ I + + SDH PV+ +D+ Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784 >gi|229149383|ref|ZP_04277619.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus m1550] gi|228634025|gb|EEK90618.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus m1550] Length = 788 Score = 37.5 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%) Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263 +DHI+++ ++ I + + SDH PV+ +D+ Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784 >gi|229154750|ref|ZP_04282865.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus ATCC 4342] gi|228628698|gb|EEK85410.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus ATCC 4342] Length = 788 Score = 37.5 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%) Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263 +DHI+++ ++ I + + SDH PV+ +D+ Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784 >gi|229160143|ref|ZP_04288144.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus R309803] gi|228623354|gb|EEK80179.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus R309803] Length = 788 Score = 37.5 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%) Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263 +DHI+++ ++ I + + SDH PV+ +D+ Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784 >gi|229171829|ref|ZP_04299400.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus MM3] gi|228611649|gb|EEK68900.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus MM3] Length = 788 Score = 37.5 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%) Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263 +DHI+++ ++ I + + SDH PV+ +D+ Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784 >gi|229177605|ref|ZP_04304982.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus 172560W] gi|228605795|gb|EEK63239.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus 172560W] Length = 788 Score = 37.5 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%) Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263 +DHI+++ ++ I + + SDH PV+ +D+ Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784 >gi|229183381|ref|ZP_04310608.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BGSC 6E1] gi|228600097|gb|EEK57690.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BGSC 6E1] Length = 788 Score = 37.5 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%) Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263 +DHI+++ ++ I + + SDH PV+ +D+ Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784 >gi|229195383|ref|ZP_04322152.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus m1293] gi|228588082|gb|EEK46131.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus m1293] Length = 788 Score = 37.5 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%) Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263 +DHI+++ ++ I + + SDH PV+ +D+ Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784 >gi|227538655|ref|ZP_03968704.1| endonuclease/exonuclease/phosphatase [Sphingobacterium spiritivorum ATCC 33300] gi|227241574|gb|EEI91589.1| endonuclease/exonuclease/phosphatase [Sphingobacterium spiritivorum ATCC 33300] Length = 258 Score = 37.5 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 17/44 (38%), Gaps = 4/44 (9%) Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 N ID IM++ + + + + SDH PV L Sbjct: 216 NPNREIDFIMVNKSKNPKFQNHTVIEE----SYASDHRPVYAEL 255 >gi|225863033|ref|YP_002748411.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus 03BB102] gi|225790557|gb|ACO30774.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus 03BB102] Length = 788 Score = 37.5 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%) Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263 +DHI+++ ++ I + + SDH PV+ +D+ Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784 >gi|222094804|ref|YP_002528864.1| endonuclease/exonuclease/phosphatase [Bacillus cereus Q1] gi|221238862|gb|ACM11572.1| endonuclease/exonuclease/phosphatase [Bacillus cereus Q1] Length = 788 Score = 37.5 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%) Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263 +DHI+++ ++ I + + SDH PV+ +D+ Sbjct: 741 LDHILVTNNIAPHTIVDPLHLNSNIMKE---HGRVSDHDPVLAQIDL 784 >gi|206976594|ref|ZP_03237500.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus H3081.97] gi|206745277|gb|EDZ56678.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus H3081.97] Length = 788 Score = 37.5 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%) Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263 +DHI+++ ++ I + + SDH PV+ +D+ Sbjct: 741 LDHILVTNNIAPHTIVDPLHLNSNIMKE---HGRVSDHDPVLAQIDL 784 >gi|218896127|ref|YP_002444538.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus G9842] gi|218542051|gb|ACK94445.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus G9842] Length = 788 Score = 37.5 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%) Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263 +DHI+++ ++ I + + SDH PV+ +D+ Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784 >gi|218235001|ref|YP_002365840.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus B4264] gi|218162958|gb|ACK62950.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus B4264] Length = 788 Score = 37.5 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%) Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263 +DHI+++ ++ I + + SDH PV+ +D+ Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784 >gi|196036463|ref|ZP_03103859.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus W] gi|195990937|gb|EDX54909.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus W] Length = 788 Score = 37.5 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%) Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263 +DHI+++ ++ I + + SDH PV+ +D+ Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784 >gi|206968309|ref|ZP_03229265.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus AH1134] gi|206737229|gb|EDZ54376.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus AH1134] Length = 788 Score = 37.5 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%) Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263 +DHI+++ ++ I + + SDH PV+ +D+ Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784 >gi|217958656|ref|YP_002337204.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus AH187] gi|229137866|ref|ZP_04266465.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST26] gi|217063925|gb|ACJ78175.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus AH187] gi|228645523|gb|EEL01756.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST26] Length = 788 Score = 37.5 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%) Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263 +DHI+++ ++ I + + SDH PV+ +D+ Sbjct: 741 LDHILVTNNIAPHTIVDPLHLNSNIMKE---HGRVSDHDPVLAQIDL 784 >gi|52144237|ref|YP_082591.1| endonuclease/exonuclease/phosphatase [Bacillus cereus E33L] gi|51977706|gb|AAU19256.1| endonuclease/exonuclease/phosphatase [Bacillus cereus E33L] Length = 788 Score = 37.5 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%) Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263 +DHI+++ ++ I + + SDH PV+ +D+ Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784 >gi|42780246|ref|NP_977493.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus ATCC 10987] gi|42736165|gb|AAS40101.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus ATCC 10987] Length = 788 Score = 37.5 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%) Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263 +DHI+++ ++ I + + SDH PV+ +D+ Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784 >gi|30019227|ref|NP_830858.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus ATCC 14579] gi|29894770|gb|AAP08059.1| Endonuclease/Exonuclease/phosphatase family protein [Bacillus cereus ATCC 14579] Length = 738 Score = 37.5 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%) Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263 +DHI+++ ++ I + + SDH PV+ +D+ Sbjct: 691 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 734 >gi|83954036|ref|ZP_00962756.1| endonuclease/exonuclease/phosphatase family protein [Sulfitobacter sp. NAS-14.1] gi|83841073|gb|EAP80243.1| endonuclease/exonuclease/phosphatase family protein [Sulfitobacter sp. NAS-14.1] Length = 341 Score = 37.5 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 12/54 (22%) Query: 223 IDHIMLSPEATSLLHSARI---DTKPRGW---------TKPSDHTPVIVSLDIP 264 +D+IM+SP T+ RI P W SDH PV + LD+ Sbjct: 285 LDYIMISPALTAHRPQWRIWHPLDDPECWGDATLRDALITASDHFPVTIDLDLS 338 >gi|75759359|ref|ZP_00739455.1| Endonuclease/Exonuclease/phosphatase family protein [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74493126|gb|EAO56246.1| Endonuclease/Exonuclease/phosphatase family protein [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 788 Score = 37.5 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%) Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263 +DHI+++ ++ I + + SDH PV+ +D+ Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784 >gi|47567552|ref|ZP_00238263.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus G9241] gi|47555747|gb|EAL14087.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus G9241] Length = 788 Score = 37.5 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%) Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263 +DHI+++ ++ I + + SDH PV+ +D+ Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784 >gi|168021087|ref|XP_001763073.1| predicted protein [Physcomitrella patens subsp. patens] gi|162685556|gb|EDQ71950.1| predicted protein [Physcomitrella patens subsp. patens] Length = 347 Score = 37.5 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 31/198 (15%), Positives = 59/198 (29%), Gaps = 15/198 (7%) Query: 16 ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNG---VAILS 72 AR L + +PDI+CLQE ++ E L+S Y + + Sbjct: 36 ARKKKLLRELALWSPDIMCLQEVD-HYEDL-NEELESKGYVGVYTSRTGASTDGCAMFWR 93 Query: 73 KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIK 132 K + + + + + + +GN +L K ++ Sbjct: 94 KNRFELLEEECIKFNEFNLRDNVAQLCVLWNNCVVVGNTHLLFNPKRGDVKLGQARVLLE 153 Query: 133 RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192 + + P+ AGD+N P + D + +N+ Sbjct: 154 KAHAISE--KWGNAPVAIAGDFNSTPWSALYRFMSCSQLD--------LAGHDRRNISGQ 203 Query: 193 DAIRATHDTHHLYSFWDY 210 + + YS WD Sbjct: 204 EEGAKERFKTNAYSRWDQ 221 >gi|147779484|emb|CAN67711.1| hypothetical protein VITISV_020427 [Vitis vinifera] Length = 843 Score = 37.5 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 7/60 (11%), Positives = 17/60 (28%), Gaps = 7/60 (11%) Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 ++ R+D +++ + R SDH P+++ Sbjct: 366 QGGRCTW----NGGRGSQSWARLDRFLVTQNWLDHFSGVV---QSRLPRPTSDHFPILLE 418 >gi|189464629|ref|ZP_03013414.1| hypothetical protein BACINT_00972 [Bacteroides intestinalis DSM 17393] gi|189436903|gb|EDV05888.1| hypothetical protein BACINT_00972 [Bacteroides intestinalis DSM 17393] Length = 356 Score = 37.5 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 35/248 (14%), Positives = 74/248 (29%), Gaps = 42/248 (16%) Query: 20 NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEI 79 + + + + D++ L E + + K F ++ L + ++++ + + Sbjct: 47 GIIDVLDQMDADVVFLCEVR-DGKRFIPHVIEELKKRGKHYYGETFDLAIGILSKFKPDS 105 Query: 80 VTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWI-------- 131 +T D ++ T TI Q + + +L + N + Sbjct: 106 MTKCCIVPGDESRAMVKMTTTIEGQPVSFYSCHLDYRNYECYMPRGYSGTSWKKIDNPIT 165 Query: 132 ------------------KRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 F++ ++ P+I GD+N P D D Sbjct: 166 DESEVLKANRLSFRDESIHAFVQEVQTDIKQGRPVIMGGDFN-EPSHLDWQADTKNLWDH 224 Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD------------SW--SKNK 219 + L GF D+ R + Y + + A +W ++ Sbjct: 225 NGAVIHWDCSMMLHEAGFKDSYREKYPNPVRYPGFTFPAGNKLAEEAKLEKLAWAPEADE 284 Query: 220 GIRIDHIM 227 RID I Sbjct: 285 RDRIDFIY 292 >gi|169617934|ref|XP_001802381.1| hypothetical protein SNOG_12150 [Phaeosphaeria nodorum SN15] gi|182676428|sp|Q0U7W4|CCR4_PHANO RecName: Full=Glucose-repressible alcohol dehydrogenase transcriptional effector; AltName: Full=Carbon catabolite repressor protein 4; AltName: Full=Cytoplasmic deadenylase gi|160703518|gb|EAT80562.2| hypothetical protein SNOG_12150 [Phaeosphaeria nodorum SN15] Length = 597 Score = 37.5 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 23/59 (38%), Gaps = 5/59 (8%) Query: 16 ARIHNLAAWIKENNPDIICLQETKTEDKNFP---FETLQSLNYHIETCGQKSYNGVAIL 71 R + +K+ N DI+CLQE + +F E L +Y + +A Sbjct: 251 TRRELILGELKQRNADIVCLQEI--DQDSFNEYFREKLAHYDYKGVFWPKSRARTMAER 307 >gi|50551685|ref|XP_503317.1| YALI0D26444p [Yarrowia lipolytica] gi|49649185|emb|CAG81523.1| YALI0D26444p [Yarrowia lipolytica] Length = 1301 Score = 37.5 bits (85), Expect = 2.0, Method: Composition-based stats. Identities = 33/262 (12%), Positives = 71/262 (27%), Gaps = 15/262 (5%) Query: 4 VTVATWNVNSIRAR--IHNLAAWI-----KENNPDIICLQETKTEDKNF-PFETLQSLNY 55 V V T N+ + ++ L I + PD++ LQET D + + + S + Sbjct: 26 VKVITANIGGFKMAEALNRLPDTIVNIIRTTHYPDLVLLQETNWVDSSLQTAQQIISNSP 85 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + A +S + + + E ++ + Sbjct: 86 YPGGRHYTLLGSTAGVSNRSVGVGLVYSDNVTITNFTTVFEYFPALDNRLCLADVHIKGT 145 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 ++ L++ L + D + Sbjct: 146 DRHLSLINVYAPNEQGASPFTNRQFYQSLDDYLRLHPCQYPLIAAGDWNAVASNDGRIGE 205 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 + + LY+ + + G R+D + +S + Sbjct: 206 KVTTHLKDFLANWDLLDTYTLISKHRKGLYTHTNNSRGA-----GRRLDQLHISSTLSQW 260 Query: 236 LHSARIDTKPRGW--TKPSDHT 255 + S ++ T +G TK S H Sbjct: 261 IKSTQLVTNKQGHNITKSSHHA 282 >gi|319427362|gb|ADV55436.1| Endonuclease/exonuclease/phosphatase [Shewanella putrefaciens 200] Length = 396 Score = 37.5 bits (85), Expect = 2.1, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 17/53 (32%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSK 73 L+ +I PDI+ QE + + Q L Y + S Sbjct: 59 LSEFIAHRQPDIVGFQEVFSPEPLKRIAREQGLGYFAVVDEPTLISDYIYRSP 111 >gi|86138524|ref|ZP_01057097.1| endonuclease/exonuclease/phosphatase family protein [Roseobacter sp. MED193] gi|85824584|gb|EAQ44786.1| endonuclease/exonuclease/phosphatase family protein [Roseobacter sp. MED193] Length = 331 Score = 37.5 bits (85), Expect = 2.1, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 18/53 (33%), Gaps = 12/53 (22%) Query: 223 IDHIMLSPEATSL---------LHSARIDTKPRGWTK---PSDHTPVIVSLDI 263 +D+IM+S + A SDH PV + L++ Sbjct: 278 LDYIMISHGLEAYGPHWRIWHPFEDAECYDDIPLREALLAASDHFPVSLDLEL 330 >gi|146294023|ref|YP_001184447.1| endonuclease/exonuclease/phosphatase [Shewanella putrefaciens CN-32] gi|145565713|gb|ABP76648.1| Endonuclease/exonuclease/phosphatase [Shewanella putrefaciens CN-32] Length = 396 Score = 37.5 bits (85), Expect = 2.1, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 17/53 (32%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSK 73 L+ +I PDI+ QE + + Q L Y + S Sbjct: 59 LSEFIAHRQPDIVGFQEVFSPEPLKRIAREQGLGYFAVVDEPTLISDYIYRSP 111 >gi|327538463|gb|EGF25127.1| endonuclease/exonuclease/phosphatase [Rhodopirellula baltica WH47] Length = 406 Score = 37.5 bits (85), Expect = 2.1, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 29/57 (50%), Gaps = 6/57 (10%) Query: 215 WSKNKGIRIDHIMLSPEATSLLHSARIDTKPR----GWTKPSDHTPVIVSLDIPEPR 267 + +N+ IR+D+++ S ++ SA + + + +DH V + ++ P P+ Sbjct: 352 FGRNE-IRVDYVLPSSNL-HVIRSAVVWPDAQTDLGKRVRATDHRMVWIDIERPSPQ 406 >gi|302556768|ref|ZP_07309110.1| secreted protein [Streptomyces griseoflavus Tu4000] gi|302474386|gb|EFL37479.1| secreted protein [Streptomyces griseoflavus Tu4000] Length = 295 Score = 37.5 bits (85), Expect = 2.1, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 7/42 (16%) Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 RID I +SP + AR T+ SDH PV+ L I Sbjct: 256 RIDLITVSPGIG--VRDAR-----TVATEASDHRPVVADLTI 290 >gi|258648749|ref|ZP_05736218.1| endonuclease/Exonuclease/phosphatase family protein [Prevotella tannerae ATCC 51259] gi|260851066|gb|EEX70935.1| endonuclease/Exonuclease/phosphatase family protein [Prevotella tannerae ATCC 51259] Length = 337 Score = 37.5 bits (85), Expect = 2.1, Method: Composition-based stats. Identities = 35/286 (12%), Positives = 73/286 (25%), Gaps = 49/286 (17%) Query: 15 RARIHNLAAWIKE----NNPDIICLQET---KTEDKNFPFETLQSLNYHIETCGQKSYNG 67 RA++ +A+ I P ++ L E + + L S NY G Sbjct: 60 RAKLSRIASVIAGVGEMQPPKLVALCEVENARVIEDLLHHTRLHSFNYRYCMTESADRRG 119 Query: 68 VAIL-----------SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 + + I + + + +T ++ + +L G Sbjct: 120 IDVALLYQPSTFHLLYMDTLRVIPANKHENPTRDILHVCGLVPSGDTLSVFVVHLPSRRG 179 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + Y +++ R R + ++ GD+N + Sbjct: 180 GVRRTMPYRCRVAQRLRQEIDGLTRNGRDRKVVIMGDFNDEHTDPSIATVLE-ARKWTDA 238 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236 ++ ++ + I+ TH W D ++ + + Sbjct: 239 IQPPFLCVLTADLKAANGIQGTHKFQGR---WAQLDQIIVN------DRLLTTEGLHTSP 289 Query: 237 HSARIDTKP---------------------RGWTKPSDHTPVIVSL 261 I T SDH PV+V Sbjct: 290 KDCFIFTDAPLLKYDAGDHGVVPYRSFLGSFYQGGFSDHLPVVVDF 335 >gi|229125430|ref|ZP_04254492.1| hypothetical protein bcere0016_56560 [Bacillus cereus 95/8201] gi|228658006|gb|EEL13784.1| hypothetical protein bcere0016_56560 [Bacillus cereus 95/8201] Length = 237 Score = 37.5 bits (85), Expect = 2.1, Method: Composition-based stats. Identities = 32/261 (12%), Positives = 74/261 (28%), Gaps = 27/261 (10%) Query: 4 VTVATWNVNS--IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + WN R +I + DI+ + E + + + + Y G Sbjct: 1 MKIVAWN-AGMAFRKKIDKILPL----KADILIISEC-EQPEKWGQIDKEKGIYKFLWEG 54 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 G+ I++ + +I H + + + Q + ++ G S Sbjct: 55 DNPNKGIGIITFDKRYKIEIHPE--YDKSFRYIVPIKVSADNQEFIMFAVWSQKGEKRYS 112 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + ++++ + + ++ I + I + Q Sbjct: 113 SYIGQIYLALEKYASLLKEPCIIVGDWNSNKVFDYIKRVKTHSEVIGFLEAFGIKSAYHQ 172 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 F++ Q + + ID + S + L S I Sbjct: 173 FFEEEQGEELKATHYFRKEKVRPFH----------------IDCLFASDIFLNKLESIEI 216 Query: 242 DTKPRGWTKPSDHTPVIVSLD 262 + W + SDH P+ + Sbjct: 217 GSYE-EWIEFSDHMPLSAEFN 236 >gi|3046704|emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|7269488|emb|CAB79491.1| putative protein [Arabidopsis thaliana] Length = 1141 Score = 37.5 bits (85), Expect = 2.1, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 31/67 (46%), Gaps = 6/67 (8%) Query: 205 YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 +++W+ S ++ +ID I+++ ++L S+ G SDH V L++ Sbjct: 180 FTWWN---KSKTRPVAKKIDRILVNESWSNLFPSSF---GLFGPPDFSDHASCGVVLELD 233 Query: 265 EPRKKQQ 271 + K+ Sbjct: 234 PIKAKRP 240 >gi|326480264|gb|EGE04274.1| endonuclease/exonuclease/phosphatase [Trichophyton equinum CBS 127.97] Length = 292 Score = 37.5 bits (85), Expect = 2.1, Method: Composition-based stats. Identities = 42/297 (14%), Positives = 81/297 (27%), Gaps = 53/297 (17%) Query: 3 VVTVATWNVN-------------SIRARIHNLAAWIK---ENNPD-IICLQETKTEDKNF 45 + + T N+ S+RA ++ + NP+ +CLQE Sbjct: 7 LFRILTHNIRYATTSPSAGEQPWSVRA--PHIVNELDYHSRLNPESFVCLQE--ALHNQV 62 Query: 46 PF------------ETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR 93 ET Q Y + K + + + + L Sbjct: 63 TDVLAGLNSRPHAAETDQWAYYGVGRDDGKQAGEYSPIFYRPAVWTLQEKETVWLSETPS 122 Query: 94 FIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGD 153 + + + ++ + IT + + RF S +L L + Sbjct: 123 VPSKGWDAASIRIVTIGVFNHKSSNITVLAMNTHLDDQGSKSRFESAKLILSLIQKYLAR 182 Query: 154 YNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD 213 + + E + + + + ++ +D Sbjct: 183 -YPEVKGNFLAGDFNSIESQEAYREFTKPGSSIVDTYKKVPAAQHYGDEITFTGFD---- 237 Query: 214 SWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP----------SDHTPVIVS 260 K KG RID++M+ P+ SA I G+ SDH V+ Sbjct: 238 --GKTKGSRIDYVMVGPQ---SCSSASIPFTVNGYAVMPNRFDNRIYNSDHRAVVAD 289 >gi|325181728|emb|CCA16183.1| AlNc14C19G1963 [Albugo laibachii Nc14] Length = 196 Score = 37.5 bits (85), Expect = 2.1, Method: Composition-based stats. Identities = 30/205 (14%), Positives = 57/205 (27%), Gaps = 24/205 (11%) Query: 33 ICLQETKTEDKNFPFET-----LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDD 87 I LQET+ + + + + N + +G + Sbjct: 2 IALQETRLSNDDNQRKNDRFIRIVDANARVFWFPISEASGHNGVGLILSSHHPFG----- 56 Query: 88 LDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEP 147 V + +++ L + + + + F + Sbjct: 57 PIVNVTSLHINQSVHDPYLLLDTSIMSQRIWMHVVYAPSHLPERLSFFQSLPHDGPAGLQ 116 Query: 148 LIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF 207 I GD+++ P + ++ + MG TDA R TH Y+ Sbjct: 117 HIVLGDFDVPLNPTLDSSKQRHSGA-----DIEALPRWTMQMGLTDAWRTTHPYFKEYT- 170 Query: 208 WDYYADSWSKNKGIRIDHIMLSPEA 232 +N RID+ LS E Sbjct: 171 -----GPRRRN---RIDYCFLSSEL 187 >gi|313237482|emb|CBY19922.1| unnamed protein product [Oikopleura dioica] Length = 391 Score = 37.5 bits (85), Expect = 2.1, Method: Composition-based stats. Identities = 27/236 (11%), Positives = 58/236 (24%), Gaps = 36/236 (15%) Query: 2 SVVTVATWNVNSI------R--------ARIHNLAAW----------IKENNPDIICLQE 37 S +++WN+ + R A L W IKE + D++CLQE Sbjct: 44 SKFRLSSWNI--LAQDYADRCSHLYGHLASKKQLLNWPVRWTKISDEIKELDSDVLCLQE 101 Query: 38 TKTEDKNFPFETL-QSLNYHIETCGQKS--------YNGVAILSKYQPIEIVTHLPGDDL 88 ++ + L Y +++ + + H Sbjct: 102 VQSSCYESEVRPFLERLRYKCRYLQKRNLPDGSLIAFKEGIFKKVLTKEIHMWHPDKCPT 161 Query: 89 DVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPL 148 + + + + + +L K + + + + Sbjct: 162 GQIGLLVLLEHVKSGKMILVSTTHLVFNPYRGDWKLKQIMEILAEIHEILRNSR-QKPAV 220 Query: 149 IFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL 204 + GD N P + + D + Q + H Sbjct: 221 VLCGDLNSQPHSSLVQFLLNKKFDLSGIRARDIAQQDYDFSRQYNYYGRRHSHVGR 276 >gi|169787424|gb|ACA80151.1| putative DNA lyase [Glomerella graminicola] Length = 233 Score = 37.5 bits (85), Expect = 2.1, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 22/57 (38%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81 + DI+ +QETK + K+ + + + + K G + ++ Y Sbjct: 2 FEILEADIVIMQETKIQRKDLRDDMVLVPGWDVFFSLPKHKKGYSGVAIYTRNAKCC 58 >gi|169787422|gb|ACA80150.1| putative DNA lyase [Glomerella graminicola] Length = 233 Score = 37.5 bits (85), Expect = 2.1, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 22/57 (38%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81 + DI+ +QETK + K+ + + + + K G + ++ Y Sbjct: 2 FEILEADIVIMQETKIQRKDLRDDMVLVPGWDVFFSLPKHKKGYSGVAIYTRNAKCC 58 >gi|169787420|gb|ACA80149.1| putative DNA lyase [Glomerella graminicola] gi|169787426|gb|ACA80152.1| putative DNA lyase [Glomerella graminicola] gi|169787428|gb|ACA80153.1| putative DNA lyase [Glomerella graminicola] Length = 233 Score = 37.5 bits (85), Expect = 2.1, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 22/57 (38%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81 + DI+ +QETK + K+ + + + + K G + ++ Y Sbjct: 2 FEILEADIVIMQETKIQRKDLRDDMVLVPGWDVFFSLPKHKKGYSGVAIYTRNAKCC 58 >gi|169787364|gb|ACA80121.1| putative DNA lyase [Glomerella graminicola] Length = 233 Score = 37.5 bits (85), Expect = 2.1, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 22/57 (38%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81 + DI+ +QETK + K+ + + + + K G + ++ Y Sbjct: 2 FEILEADIVIMQETKIQRKDLRDDMVLVPGWDVFFSLPKHKKGYSGVAIYTRNAKCC 58 >gi|169787362|gb|ACA80120.1| putative DNA lyase [Glomerella graminicola] Length = 233 Score = 37.5 bits (85), Expect = 2.1, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 22/57 (38%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81 + DI+ +QETK + K+ + + + + K G + ++ Y Sbjct: 2 FEILEADIVIMQETKIQRKDLRDDMVLVPGWDVFFSLPKHKKGYSGVAIYTRNAKCC 58 >gi|169787354|gb|ACA80116.1| putative DNA lyase [Glomerella graminicola] gi|169787356|gb|ACA80117.1| putative DNA lyase [Glomerella graminicola] gi|169787358|gb|ACA80118.1| putative DNA lyase [Glomerella graminicola] gi|169787360|gb|ACA80119.1| putative DNA lyase [Glomerella graminicola] gi|169787400|gb|ACA80139.1| putative DNA lyase [Glomerella graminicola] gi|169787402|gb|ACA80140.1| putative DNA lyase [Glomerella graminicola] gi|169787404|gb|ACA80141.1| putative DNA lyase [Glomerella graminicola] gi|169787406|gb|ACA80142.1| putative DNA lyase [Glomerella graminicola] gi|169787408|gb|ACA80143.1| putative DNA lyase [Glomerella graminicola] gi|169787466|gb|ACA80172.1| putative DNA lyase [Glomerella graminicola] gi|169787468|gb|ACA80173.1| putative DNA lyase [Glomerella graminicola] Length = 233 Score = 37.5 bits (85), Expect = 2.1, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 22/57 (38%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81 + DI+ +QETK + K+ + + + + K G + ++ Y Sbjct: 2 FEILEADIVIMQETKIQRKDLRDDMVLVPGWDVFFSLPKHKKGYSGVAIYTRNAKCC 58 >gi|53803236|ref|YP_115006.1| endonuclease/exonuclease/phosphatase family protein [Methylococcus capsulatus str. Bath] gi|53756997|gb|AAU91288.1| endonuclease/exonuclease/phosphatase family protein [Methylococcus capsulatus str. Bath] Length = 282 Score = 37.5 bits (85), Expect = 2.1, Method: Composition-based stats. Identities = 31/284 (10%), Positives = 65/284 (22%), Gaps = 61/284 (21%) Query: 3 VVTVATWNVN--------------SIR------ARIHNLAAWIKENNP-DIICLQETKTE 41 V+ +A++N+ R R+ NL + P DI LQE Sbjct: 27 VLRLASFNIQTGISTSSYRDYITGGWRHVWPSTKRLPNLNRIAQLLEPFDIAGLQEV--- 83 Query: 42 DKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI 101 G+ + Q + H Q + Sbjct: 84 ----------------------DGGGMRSHNIVQTQYLAEHAGFAYWHNQVNRRIGRLAL 121 Query: 102 NTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161 ++ L + + + L + + Sbjct: 122 HSNGLLSRIRPDFVHDYPLPGMPGRGALLARFGRDPRNALYVCVAHLALSRRARLKQLRF 181 Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI 221 + ++ L +F + Sbjct: 182 ISDLIGHLPYVVMMGDLNCEPNTPELDLLLDATHLN-DPVCRLKTFPSWRPHKM------ 234 Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 +DHI+++P ++ + SDH PV + + +P+ Sbjct: 235 -LDHILVTPSL--RVNRLEVIDFA-----CSDHLPVSMEVVLPD 270 >gi|24380384|ref|NP_722339.1| hypothetical protein SMU.2046c [Streptococcus mutans UA159] gi|24378406|gb|AAN59645.1|AE015027_3 conserved hypothetical protein [Streptococcus mutans UA159] Length = 273 Score = 37.5 bits (85), Expect = 2.1, Method: Composition-based stats. Identities = 35/269 (13%), Positives = 86/269 (31%), Gaps = 22/269 (8%) Query: 3 VVTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57 +V + T N +S + ++ L I EN+ D+IC+QE ++ E + L + Sbjct: 1 MVKLLTINSHSWMEEDPQKKLEILGKTILENDYDVICVQEV---NQLLHSEPAKDLPNYC 57 Query: 58 ET-----CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIE-----ATFTINTQTLR 107 + + +Y + + + + RF E + + +Q + Sbjct: 58 QVAGTPAIHKDNYALQLVTFLLEQERVYYWSWAYNHIGYDRFQEGVAILSKTPLVSQGIL 117 Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167 I ++ H + + + + + + P+ Sbjct: 118 ISDVDDEHDYHTRRALLGKTKIDQEDIAIVSLHMSWWNKGFQGEWN-KLERVLSNLKLPL 176 Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK-GIRIDHI 226 + D E L++ + + + D W N+ +++D++ Sbjct: 177 LLMGDFNNPYENEGYQAILKSSLKLQDSHQSAKITYGKATIQKEIDGWQGNQEALKVDYV 236 Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHT 255 LS + + + + + + SDH Sbjct: 237 FLSSDW--QVEKSEVIFDGKHYPMISDHC 263 >gi|37676826|ref|NP_937222.1| putative phospholipase C precursor [Vibrio vulnificus YJ016] gi|37201370|dbj|BAC97192.1| putative phospholipase C precursor [Vibrio vulnificus YJ016] Length = 378 Score = 37.5 bits (85), Expect = 2.1, Method: Composition-based stats. Identities = 24/146 (16%), Positives = 49/146 (33%), Gaps = 18/146 (12%) Query: 4 VTVATWNVNSIRA-------RIHNLAAWIKENNPDIICLQETKTE-DKNFPFETLQSLNY 55 + + T+N+ ++ A R + ++K D++ LQE F E + Y Sbjct: 178 LKIMTYNIWALPAIASHIDERFELIPDYVK--GYDVLALQEVFANGRGAFLRELAKEYPY 235 Query: 56 HIETCGQKSYN----GVAILSKYQPI----EIVTHLPGDDLDVQARFIEATFTINTQTLR 107 + + +N GV I+S+Y + + G D A + Sbjct: 236 QTKMLDKDGFNIYDGGVIIVSRYPIVNQAQFVFPDCTGTDCFADKGVNYAEVIKGGEAYH 295 Query: 108 IGNLYLPHGNPITSTKYDDKISWIKR 133 + + + T+ Y + R Sbjct: 296 VFATHTASYDTDTARDYRQRQFKQMR 321 >gi|297727473|ref|NP_001176100.1| Os10g0351414 [Oryza sativa Japonica Group] gi|255679325|dbj|BAH94828.1| Os10g0351414 [Oryza sativa Japonica Group] Length = 912 Score = 37.5 bits (85), Expect = 2.1, Method: Composition-based stats. Identities = 25/253 (9%), Positives = 58/253 (22%), Gaps = 28/253 (11%) Query: 18 IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPI 77 + +L I N +I + ETK+ ++ + Sbjct: 10 MQHLQRLIYSTNAKVIFISETKSS----------------------KVTASDLIHHFHVA 47 Query: 78 EIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF 137 + + I + + ++ + R Sbjct: 48 NSHVVPVDQASGGLWLMWDEDMDLTIVQSSINYILAYGVYKNSGPIFNLLCIYGDPSHRA 107 Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA 197 S + + D + + ++ + Sbjct: 108 TSAMWSEISSFVVHSSHKPTFCMGDLNEIMHANEKYGLAPPNQNRINIFKHHVNNLGLMD 167 Query: 198 THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257 Y+ W R+D + + E + + P SDH P+ Sbjct: 168 MGYNGPAYT-WSNKQQGKDL-VLERLDRCLANVEWCFNYPNTTVYHLPM---LYSDHAPI 222 Query: 258 IVSLDIPEPRKKQ 270 I L+ P+ R+ + Sbjct: 223 IAILN-PKNRRPK 234 >gi|147777299|emb|CAN66801.1| hypothetical protein VITISV_015403 [Vitis vinifera] Length = 965 Score = 37.5 bits (85), Expect = 2.1, Method: Composition-based stats. Identities = 10/60 (16%), Positives = 20/60 (33%), Gaps = 7/60 (11%) Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 +++ R+D M+S + T+ R SDH P+++ Sbjct: 202 QGGSFTW----GGGLHNQAWARLDRFMVSSSWLDQFSNV---TQKRLSWPISDHFPILIE 254 >gi|127511624|ref|YP_001092821.1| endonuclease/exonuclease/phosphatase [Shewanella loihica PV-4] gi|126636919|gb|ABO22562.1| Endonuclease/exonuclease/phosphatase [Shewanella loihica PV-4] Length = 357 Score = 37.5 bits (85), Expect = 2.1, Method: Composition-based stats. Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 13/61 (21%) Query: 218 NKGIRIDHIMLSPEATSLLHSA--------RIDTKP----RGWTKPS-DHTPVIVSLDIP 264 N+G ID+I+LS E H D+ S DH PV+VSL I Sbjct: 297 NRGEVIDYILLSNEFDPHNHQCLAQVSQYHTYDSHLINPQYDRDSHSTDHAPVMVSLKIR 356 Query: 265 E 265 E Sbjct: 357 E 357 >gi|330960376|gb|EGH60636.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. maculicola str. ES4326] Length = 261 Score = 37.5 bits (85), Expect = 2.1, Method: Composition-based stats. Identities = 32/271 (11%), Positives = 66/271 (24%), Gaps = 41/271 (15%) Query: 7 ATWNV---N-----SI---RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55 + NV N I R + L ++ + DI+ LQE Sbjct: 18 VSLNVLTMNMHMGFGIFNRRFILPELREAVRSVSADIVFLQEV----------------- 60 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 Q V E + D + L + Sbjct: 61 --HGEQQSHARSVKGWPTISQYEFLADAMWSDFAYGRNAVYPDGDHGNALLS--KYPIIQ 116 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + + + + + + + G + + + Sbjct: 117 HENLDISIDGTEQRGLLHCILDVPNAGRVHAVCVHLGLFESHRRQQLKLLAELMARLPEG 176 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIML--SPEA 232 + ++ T + A S+ + +R+D + + S Sbjct: 177 EPVIVAGDFNDWRQRADALLQGTGLYEVFVEHFGAPAKSFPARLPLLRLDRVYVRNSTSH 236 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + S+ R W+ SDH P+ V L + Sbjct: 237 RPKVLSS------RPWSHLSDHAPLAVELTL 261 >gi|156328698|ref|XP_001618979.1| hypothetical protein NEMVEDRAFT_v1g231585 [Nematostella vectensis] gi|156201151|gb|EDO26879.1| predicted protein [Nematostella vectensis] Length = 409 Score = 37.5 bits (85), Expect = 2.1, Method: Composition-based stats. Identities = 15/179 (8%), Positives = 38/179 (21%), Gaps = 8/179 (4%) Query: 31 DIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDV 90 D+IC QE K E + F + + + + + + L + Sbjct: 25 DLICPQEIKVEPELFDLKGITEE----VSKALNLSDKPHKCDECGKCFTQSGTLKTHLRI 80 Query: 91 QARFIEATFTINTQTLR----IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEE 146 + + + + + H + + + A + + Sbjct: 81 HTKVKPYECEVCGKCFTRKTHLKTHLMVHSGQKPYKCDECGKCFTQHAHLKAHLVIHSGK 140 Query: 147 PLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY 205 + + + E + G H Y Sbjct: 141 KPYKCDECGKCFTLSGDLKTHLVIHSGEKPYECDDCGKCFTQSGAMKRHLRIHTGKKPY 199 >gi|50547863|ref|XP_501401.1| YALI0C03498p [Yarrowia lipolytica] gi|50548455|ref|XP_501697.1| YALI0C10868p [Yarrowia lipolytica] gi|50549073|ref|XP_502007.1| YALI0C19305p [Yarrowia lipolytica] gi|50549121|ref|XP_502031.1| YALI0C19888p [Yarrowia lipolytica] gi|50555059|ref|XP_504938.1| YALI0F03245p [Yarrowia lipolytica] gi|49647268|emb|CAG81700.1| YALI0C03498p [Yarrowia lipolytica] gi|49647564|emb|CAG82006.1| YALI0C10868p [Yarrowia lipolytica] gi|49647874|emb|CAG82327.1| YALI0C19305p [Yarrowia lipolytica] gi|49647898|emb|CAG82351.1| YALI0C19888p [Yarrowia lipolytica] gi|49650808|emb|CAG77745.1| YALI0F03245p [Yarrowia lipolytica] Length = 1300 Score = 37.5 bits (85), Expect = 2.1, Method: Composition-based stats. Identities = 33/262 (12%), Positives = 71/262 (27%), Gaps = 15/262 (5%) Query: 4 VTVATWNVNSIRAR--IHNLAAWI-----KENNPDIICLQETKTEDKNF-PFETLQSLNY 55 V V T N+ + ++ L I + PD++ LQET D + + + S + Sbjct: 26 VKVITANIGGFKMAEALNRLPDTIVNIIRTTHYPDLVLLQETNWVDSSLQTAQQIISNSP 85 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + A +S + + + E ++ + Sbjct: 86 YPGGRHYTLLGSTAGVSNRSVGVGLVYSDNVTITNFTTVFEYFPALDNRLCLADVHIKGT 145 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 ++ L++ L + D + Sbjct: 146 DRHLSLINVYAPNEQGASPFTNRQFYQSLDDYLRLHPCQYPLIAAGDWNAVASNDGRIGE 205 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 + + LY+ + + G R+D + +S + Sbjct: 206 KVTTHLKDFLANWDLLDTYTLISKHRKGLYTHTNNSRGA-----GRRLDQLHISSTLSQW 260 Query: 236 LHSARIDTKPRGW--TKPSDHT 255 + S ++ T +G TK S H Sbjct: 261 IKSTQLVTNKQGHNITKSSHHA 282 >gi|50543562|ref|XP_499947.1| YALI0A10527p [Yarrowia lipolytica] gi|50549709|ref|XP_502325.1| YALI0D02431p [Yarrowia lipolytica] gi|49645812|emb|CAG83876.1| YALI0A10527p [Yarrowia lipolytica] gi|49648193|emb|CAG80513.1| YALI0D02431p [Yarrowia lipolytica] Length = 1300 Score = 37.5 bits (85), Expect = 2.1, Method: Composition-based stats. Identities = 33/262 (12%), Positives = 71/262 (27%), Gaps = 15/262 (5%) Query: 4 VTVATWNVNSIRAR--IHNLAAWI-----KENNPDIICLQETKTEDKNF-PFETLQSLNY 55 V V T N+ + ++ L I + PD++ LQET D + + + S + Sbjct: 26 VKVITANIGGFKMAEALNRLPDTIVNIIRTTHYPDLVLLQETNWVDSSLQTAQQIISNSP 85 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + A +S + + + E ++ + Sbjct: 86 YPGGRHYTLLGSTAGVSNRSVGVGLVYSDNVTITNFTTVFEYFPALDNRLCLADVHIKGT 145 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 ++ L++ L + D + Sbjct: 146 DRHLSLINVYAPNEQGASPFTNRQFYQSLDDYLRLHPCQYPLIAAGDWNAVASNDGRIGE 205 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 + + LY+ + + G R+D + +S + Sbjct: 206 KVTTHLKDFLANWDLLDTYTLISKHRKGLYTHTNNSRGA-----GRRLDQLHISSTLSQW 260 Query: 236 LHSARIDTKPRGW--TKPSDHT 255 + S ++ T +G TK S H Sbjct: 261 IKSTQLVTNKQGHNITKSSHHA 282 >gi|50543342|ref|XP_499837.1| YALI0A07238p [Yarrowia lipolytica] gi|50549987|ref|XP_502466.1| YALI0D05973p [Yarrowia lipolytica] gi|49645702|emb|CAG83763.1| YALI0A07238p [Yarrowia lipolytica] gi|49648334|emb|CAG80654.1| YALI0D05973p [Yarrowia lipolytica] Length = 1300 Score = 37.5 bits (85), Expect = 2.1, Method: Composition-based stats. Identities = 33/262 (12%), Positives = 71/262 (27%), Gaps = 15/262 (5%) Query: 4 VTVATWNVNSIRAR--IHNLAAWI-----KENNPDIICLQETKTEDKNF-PFETLQSLNY 55 V V T N+ + ++ L I + PD++ LQET D + + + S + Sbjct: 26 VKVITANIGGFKMAEALNRLPDTIVNIIRTTHYPDLVLLQETNWVDSSLQTAQQIISNSP 85 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + A +S + + + E ++ + Sbjct: 86 YPGGRHYTLLGSTAGVSNRSVGVGLVYSDNVTITNFTTVFEYFPALDNRLCLADVHIKGT 145 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 ++ L++ L + D + Sbjct: 146 DRHLSLINVYAPNEQGASPFTNRQFYQSLDDYLRLHPCQYPLIAAGDWNAVASNDGRIGE 205 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235 + + LY+ + + G R+D + +S + Sbjct: 206 KVTTHLKDFLANWDLLDTYTLISKHRKGLYTHTNNSRGA-----GRRLDQLHISSTLSQW 260 Query: 236 LHSARIDTKPRGW--TKPSDHT 255 + S ++ T +G TK S H Sbjct: 261 IKSTQLVTNKQGHNITKSSHHA 282 >gi|312892184|ref|ZP_07751681.1| Endonuclease/exonuclease/phosphatase [Mucilaginibacter paludis DSM 18603] gi|311295314|gb|EFQ72486.1| Endonuclease/exonuclease/phosphatase [Mucilaginibacter paludis DSM 18603] Length = 369 Score = 37.5 bits (85), Expect = 2.2, Method: Composition-based stats. Identities = 33/282 (11%), Positives = 77/282 (27%), Gaps = 47/282 (16%) Query: 4 VTVATWNVNSIRAR------IHNLAAWIKENNPDIICLQE----TK---TEDKNFPFETL 50 + + +NV+S + + ++E PD I ++E K + Sbjct: 108 IRMMAYNVHSFSNAQTNASSAQQIVSLVREQQPDFINMEEFYSFAKGKFAMCDSIKAALQ 167 Query: 51 QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 ++ G + G + PI + + I + + R+ Sbjct: 168 TPYYFYQPFSGTLAAGGGLAIFSKFPIIHQGVIRLTQDYSDTKAIFIDVKKDDKIFRVYC 227 Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170 ++L + + + ++ + Sbjct: 228 VHLQS-------FLLTAEDHVYMDSVSQKGKTNIRSSKRIVSKLKAAFIHRSAQVTMMKD 280 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI-R------- 222 + A + + + + + K +G+ R Sbjct: 281 HMAQCPYPYIVAGDFNDTPSSYAVNQMSKGIKNAF---------REKGRGLGRTYNGDIP 331 Query: 223 ---IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 ID+I++SP+ +L+ I+ K SDH P+ L Sbjct: 332 NYQIDYILVSPQF-DVLNYTVIEK------KLSDHYPIRSDL 366 >gi|212224424|ref|YP_002307660.1| membrane-bound metal-dependent hydrolase, C-terminus [Thermococcus onnurineus NA1] gi|212009381|gb|ACJ16763.1| membrane-bound metal-dependent hydrolase, C-terminus [Thermococcus onnurineus NA1] Length = 56 Score = 37.5 bits (85), Expect = 2.2, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 19/42 (45%), Gaps = 4/42 (9%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 IDHI+L + + + + SDH P+ +++P Sbjct: 19 IDHILLKKDWPAKVKDYGCLCDV----EVSDHRPIWAVIELP 56 >gi|242827035|ref|XP_002488755.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500] gi|218712147|gb|EED11574.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500] Length = 301 Score = 37.5 bits (85), Expect = 2.2, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 22/60 (36%), Gaps = 5/60 (8%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKP-SDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 ID LS + L I + + SDH P+ + +DI P + + + Sbjct: 188 IDLTFLSTSLFNRL----ILHERADEIQHDSDHRPIRMQIDIDTPTYELPHRRNWAATSV 243 >gi|139436883|ref|ZP_01771043.1| Hypothetical protein COLAER_00014 [Collinsella aerofaciens ATCC 25986] gi|133776530|gb|EBA40350.1| Hypothetical protein COLAER_00014 [Collinsella aerofaciens ATCC 25986] Length = 1098 Score = 37.5 bits (85), Expect = 2.2, Method: Composition-based stats. Identities = 14/169 (8%), Positives = 43/169 (25%), Gaps = 5/169 (2%) Query: 60 CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119 ++ + + Y ++ I+ + Sbjct: 747 FKHRNADWLEKYCVYMAVKKYFEGESRHDWPADVARYNEHLIDDKRF----HNEAELQAY 802 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 ++D + + + + P+ + D + + + Sbjct: 803 MQYRFDLAWCELMNYAHKKGIEVIGDIPMYVSDDSADAWSEPENFWLSDTGKAIEISGAP 862 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYY-ADSWSKNKGIRIDHIM 227 +F + R H + Y++W ++S +R+DH + Sbjct: 863 PDNFAPEGQVWGNPTFRWDHMKQNGYTWWMDRLRRAFSLYDRVRLDHFL 911 >gi|296422688|ref|XP_002840891.1| hypothetical protein [Tuber melanosporum Mel28] gi|295637117|emb|CAZ85082.1| unnamed protein product [Tuber melanosporum] Length = 680 Score = 37.5 bits (85), Expect = 2.2, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 18/45 (40%), Gaps = 6/45 (13%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKN------FPFETLQSLNY 55 R + + E+ DIICLQE E+ N E + Y Sbjct: 348 RKKLIHDQLIESKADIICLQEVDMENFNEYFMPGLAREEYKGAFY 392 >gi|229917706|ref|YP_002886352.1| Endonuclease/exonuclease/phosphatase [Exiguobacterium sp. AT1b] gi|229469135|gb|ACQ70907.1| Endonuclease/exonuclease/phosphatase [Exiguobacterium sp. AT1b] Length = 263 Score = 37.5 bits (85), Expect = 2.2, Method: Composition-based stats. Identities = 39/279 (13%), Positives = 77/279 (27%), Gaps = 42/279 (15%) Query: 4 VTVATWNVNSIRARI--------HNLAAWIKENNPDIICLQET---K--------TEDKN 44 + + T N + A + + I D I LQE K + N Sbjct: 1 MNILTLNCH---AWLEDRQQEKIDAIVERIASEEYDFIALQEVNQHKEAPLIYGNIRENN 57 Query: 45 FPF---ETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI 101 F E L+ L+ H ++ G I + I T + ++ + Sbjct: 58 FAHVLVERLKELDLHYHMTWDFAHYGYDIYEEGVAILSRTPFLSTESFFVSKTTDPDNYK 117 Query: 102 NTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161 + + ++ + G +T Y + W +L+ + D+ ++ Sbjct: 118 SRKIVK----AVIEGPETPTTVYSCHLGWWHDEEEPVKHQLDELLRRVEHDDHALLLGDF 173 Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI 221 + I E + +E WD K + Sbjct: 174 NNDAFIRGEG-YDYLMENGLQDLFHLATEREGDATVQGKIAG----WD------ENKKSL 222 Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 RID ++ + + + SDH V + Sbjct: 223 RIDLMLTNAPI--HVSRHAVVFDGENGPVVSDHAGVEAT 259 >gi|147779996|emb|CAN60067.1| hypothetical protein VITISV_012399 [Vitis vinifera] Length = 1707 Score = 37.5 bits (85), Expect = 2.2, Method: Composition-based stats. Identities = 12/83 (14%), Positives = 29/83 (34%), Gaps = 7/83 (8%) Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 E + + L + + + +++ + + R+D ++ + Sbjct: 785 EELGAIRGLWSDPWCIGGDFQFNQGGPFTW----SGGLNNQAMTRLDRFLVLEDWEGHFK 840 Query: 238 SARIDTKPRGWTKPSDHTPVIVS 260 A T PR SDH P+++ Sbjct: 841 GAAQCTLPR---PVSDHFPILLD 860 >gi|324325200|gb|ADY20460.1| endonuclease/exonuclease/phosphatase family protein [Bacillus thuringiensis serovar finitimus YBT-020] Length = 788 Score = 37.5 bits (85), Expect = 2.2, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 21/44 (47%), Gaps = 3/44 (6%) Query: 223 IDHIMLSPEATSL--LHSARIDTKPRGWT-KPSDHTPVIVSLDI 263 +DHI+++ + ++T + SDH PV+ +D+ Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNTNIMKEHGRVSDHDPVLAQIDL 784 >gi|301052723|ref|YP_003790934.1| endonuclease/exonuclease/phosphatase [Bacillus anthracis CI] gi|300374892|gb|ADK03796.1| endonuclease/exonuclease/phosphatase [Bacillus cereus biovar anthracis str. CI] Length = 788 Score = 37.5 bits (85), Expect = 2.2, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 21/44 (47%), Gaps = 3/44 (6%) Query: 223 IDHIMLSPEATSL--LHSARIDTKPRGWT-KPSDHTPVIVSLDI 263 +DHI+++ + ++T + SDH PV+ +D+ Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNTNIMKEHGRVSDHDPVLAQIDL 784 >gi|281338506|gb|EFB14090.1| hypothetical protein PANDA_006139 [Ailuropoda melanoleuca] Length = 126 Score = 37.5 bits (85), Expect = 2.2, Method: Composition-based stats. Identities = 21/110 (19%), Positives = 35/110 (31%), Gaps = 12/110 (10%) Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 E + L M TD R H ++F+ +SK DHI+ Sbjct: 14 KQKINKETMALDKTLDKMDLTDIFRTFHPKEAEHTFFSSAHGIFSKR-----DHILGHKS 68 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 + I SDH + L++ +K + + +K I Sbjct: 69 GLNKYKKTEITPCI-----FSDHNA--MELEVNHKKKLGNTTNTWRLKNI 111 >gi|238063240|ref|ZP_04607949.1| endonuclease/exonuclease/phosphatase [Micromonospora sp. ATCC 39149] gi|237885051|gb|EEP73879.1| endonuclease/exonuclease/phosphatase [Micromonospora sp. ATCC 39149] Length = 331 Score = 37.5 bits (85), Expect = 2.2, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 16/43 (37%), Gaps = 7/43 (16%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 IDH+++ S R SDH V+ L +P Sbjct: 295 IDHVLVDRRIAVRSVSVR-------GVPGSDHRAVLAELRLPA 330 >gi|228913758|ref|ZP_04077383.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228845697|gb|EEM90723.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 190 Score = 37.5 bits (85), Expect = 2.2, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 21/44 (47%), Gaps = 3/44 (6%) Query: 223 IDHIMLSPEATSL--LHSARIDTKPRGWT-KPSDHTPVIVSLDI 263 +DHI+++ + ++T + SDH PV+ +D+ Sbjct: 143 LDHILVTNNIAPHTIVDPVHLNTNIMKEHGRVSDHDPVLAQIDL 186 >gi|228926225|ref|ZP_04089300.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228833478|gb|EEM79040.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 788 Score = 37.5 bits (85), Expect = 2.2, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 21/44 (47%), Gaps = 3/44 (6%) Query: 223 IDHIMLSPEATSL--LHSARIDTKPRGWT-KPSDHTPVIVSLDI 263 +DHI+++ + ++T + SDH PV+ +D+ Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNTNIMKEHGRVSDHDPVLAQIDL 784 >gi|229084175|ref|ZP_04216463.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-44] gi|228699133|gb|EEL51830.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-44] Length = 190 Score = 37.5 bits (85), Expect = 2.2, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 21/44 (47%), Gaps = 3/44 (6%) Query: 223 IDHIMLSPEATSL--LHSARIDTKPRGWT-KPSDHTPVIVSLDI 263 +DHI+++ + ++T + SDH PV+ +D+ Sbjct: 143 LDHILVTNNIAPHTIVDPVHLNTNIMKEHGRVSDHDPVLAQIDL 186 >gi|229090130|ref|ZP_04221380.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-42] gi|228693207|gb|EEL46918.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-42] Length = 788 Score = 37.5 bits (85), Expect = 2.2, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 21/44 (47%), Gaps = 3/44 (6%) Query: 223 IDHIMLSPEATSL--LHSARIDTKPRGWT-KPSDHTPVIVSLDI 263 +DHI+++ + ++T + SDH PV+ +D+ Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNTNIMKEHGRVSDHDPVLAQIDL 784 >gi|170688095|ref|ZP_02879307.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. A0465] gi|254682749|ref|ZP_05146610.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. CNEVA-9066] gi|170667990|gb|EDT18741.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. A0465] Length = 788 Score = 37.5 bits (85), Expect = 2.2, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 21/44 (47%), Gaps = 3/44 (6%) Query: 223 IDHIMLSPEATSL--LHSARIDTKPRGWT-KPSDHTPVIVSLDI 263 +DHI+++ + ++T + SDH PV+ +D+ Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNTNIMKEHGRVSDHDPVLAQIDL 784 >gi|196037227|ref|ZP_03104538.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus NVH0597-99] gi|196031469|gb|EDX70065.1| endonuclease/exonuclease/phosphatase family protein [Bacillus cereus NVH0597-99] Length = 788 Score = 37.5 bits (85), Expect = 2.2, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 21/44 (47%), Gaps = 3/44 (6%) Query: 223 IDHIMLSPEATSL--LHSARIDTKPRGWT-KPSDHTPVIVSLDI 263 +DHI+++ + ++T + SDH PV+ +D+ Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNTNIMKEHGRVSDHDPVLAQIDL 784 >gi|167635355|ref|ZP_02393669.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. A0442] gi|254740190|ref|ZP_05197882.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. Kruger B] gi|167529183|gb|EDR91936.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. A0442] Length = 788 Score = 37.5 bits (85), Expect = 2.2, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 21/44 (47%), Gaps = 3/44 (6%) Query: 223 IDHIMLSPEATSL--LHSARIDTKPRGWT-KPSDHTPVIVSLDI 263 +DHI+++ + ++T + SDH PV+ +D+ Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNTNIMKEHGRVSDHDPVLAQIDL 784 >gi|49479799|ref|YP_035327.1| endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49331355|gb|AAT62001.1| endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 788 Score = 37.5 bits (85), Expect = 2.2, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 21/44 (47%), Gaps = 3/44 (6%) Query: 223 IDHIMLSPEATSL--LHSARIDTKPRGWT-KPSDHTPVIVSLDI 263 +DHI+++ + ++T + SDH PV+ +D+ Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNTNIMKEHGRVSDHDPVLAQIDL 784 >gi|30261191|ref|NP_843568.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. Ames] gi|47777892|ref|YP_017700.2| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. 'Ames Ancestor'] gi|30254805|gb|AAP25054.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. Ames] gi|47551597|gb|AAT30175.2| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. 'Ames Ancestor'] Length = 583 Score = 37.5 bits (85), Expect = 2.2, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 21/44 (47%), Gaps = 3/44 (6%) Query: 223 IDHIMLSPEATSL--LHSARIDTKPRGWT-KPSDHTPVIVSLDI 263 +DHI+++ + ++T + SDH PV+ +D+ Sbjct: 536 LDHILVTNNIAPHTIVDPVHLNTNIMKEHGRVSDHDPVLAQIDL 579 >gi|49184024|ref|YP_027276.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. Sterne] gi|65318458|ref|ZP_00391417.1| COG2374: Predicted extracellular nuclease [Bacillus anthracis str. A2012] gi|165871845|ref|ZP_02216488.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. A0488] gi|167640270|ref|ZP_02398536.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. A0193] gi|170707621|ref|ZP_02898073.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. A0389] gi|177654201|ref|ZP_02936174.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. A0174] gi|190566721|ref|ZP_03019638.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis Tsiankovskii-I] gi|227816075|ref|YP_002816084.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. CDC 684] gi|229604339|ref|YP_002865620.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. A0248] gi|254725540|ref|ZP_05187322.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. A1055] gi|254734166|ref|ZP_05191879.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. Western North America USA6153] gi|254753529|ref|ZP_05205565.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. Vollum] gi|254758627|ref|ZP_05210654.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. Australia 94] gi|49177951|gb|AAT53327.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. Sterne] gi|164712422|gb|EDR17956.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. A0488] gi|167511871|gb|EDR87251.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. A0193] gi|170127396|gb|EDS96271.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. A0389] gi|172080908|gb|EDT65988.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis str. A0174] gi|190562273|gb|EDV16241.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis Tsiankovskii-I] gi|227003436|gb|ACP13179.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. CDC 684] gi|229268747|gb|ACQ50384.1| endonuclease/exonuclease/phosphatase family protein [Bacillus anthracis str. A0248] Length = 788 Score = 37.5 bits (85), Expect = 2.2, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 21/44 (47%), Gaps = 3/44 (6%) Query: 223 IDHIMLSPEATSL--LHSARIDTKPRGWT-KPSDHTPVIVSLDI 263 +DHI+++ + ++T + SDH PV+ +D+ Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNTNIMKEHGRVSDHDPVLAQIDL 784 >gi|322789041|gb|EFZ14499.1| hypothetical protein SINV_10499 [Solenopsis invicta] Length = 1157 Score = 37.5 bits (85), Expect = 2.2, Method: Composition-based stats. Identities = 28/197 (14%), Positives = 62/197 (31%), Gaps = 28/197 (14%) Query: 96 EATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYN 155 + + + + G + + D ++ + L + + + GD+N Sbjct: 672 AIRCVLYSTSFCFVCAHFAAGQSQVNERNADYAEITRKITFPMGRTLNTHDYVFWCGDFN 731 Query: 156 IIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF-WDYYADS 214 + + + + + + Q G ++ +D ++D Sbjct: 732 YRVEMDKDEMKELIKQNEFDQILQYDQLKVQQQQGNVFKNFQEGPITFAPTYKYDLFSDD 791 Query: 215 WSKNKGIRIDHIMLSPEATSLLHSAR------ID-----------TKPRGWTKPSDHTPV 257 + ++ R +P T + R ID R K SDH PV Sbjct: 792 YDTSEKCR------TPAWTDRILWKRRKQIPDIDSPTDWNPGKLVYYGRAELKQSDHRPV 845 Query: 258 IVSLDIP----EPRKKQ 270 I ++DI +P K++ Sbjct: 846 IATIDIDVHCVDPEKRE 862 >gi|225870288|ref|YP_002746235.1| endonuclease/exonuclease/phosphatase family surface anchored protein [Streptococcus equi subsp. equi 4047] gi|225699692|emb|CAW93409.1| endonuclease/exonuclease/phosphatase family surface anchored protein [Streptococcus equi subsp. equi 4047] Length = 926 Score = 37.5 bits (85), Expect = 2.2, Method: Composition-based stats. Identities = 15/90 (16%), Positives = 33/90 (36%), Gaps = 14/90 (15%) Query: 192 TDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT-- 249 + + H+ YS++ Y ++ + +D++++S + Sbjct: 793 MANLVSRHELSDRYSYF-YRGNNQT------LDNMLVSRNLLGRYEFDMVHVNSPFMEAH 845 Query: 250 -KPSDHTPVIVSL----DIPEPRKKQQDST 274 + SDH P+++ L D P Q T Sbjct: 846 GRASDHDPLLLQLSFGKDKPAAPSDQPKKT 875 >gi|313243086|emb|CBY39780.1| unnamed protein product [Oikopleura dioica] Length = 358 Score = 37.5 bits (85), Expect = 2.2, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 23/61 (37%), Gaps = 26/61 (42%) Query: 2 SVVTVATWNVNSI------R--------ARIHNLAAW----------IKENNPDIICLQE 37 S +++WN+ + R A L W IKE + D++CLQE Sbjct: 44 SKFRLSSWNI--LAQDYADRCSHLYGHLASKKQLLNWPVRWTKISDEIKELDSDVLCLQE 101 Query: 38 T 38 Sbjct: 102 V 102 >gi|225460610|ref|XP_002264296.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1159 Score = 37.5 bits (85), Expect = 2.2, Method: Composition-based stats. Identities = 14/118 (11%), Positives = 35/118 (29%), Gaps = 7/118 (5%) Query: 143 ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH 202 EE G + +N I + + + ++ + +R Sbjct: 80 FWEEMGTIRGLWQDPWCVGGDFNVIRLLGERNRISRLSAAMRRFSEVIDDLELRDFPLQG 139 Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 +++ + R+D ++S + A + SDH P+++ Sbjct: 140 GSFTW----RGGLNNQTQSRLDRFLVSEDWEGYFSGAI---QSLLPRIVSDHCPILLD 190 >gi|118086197|ref|XP_418838.2| PREDICTED: similar to KIAA1706 protein [Gallus gallus] Length = 558 Score = 37.5 bits (85), Expect = 2.2, Method: Composition-based stats. Identities = 38/287 (13%), Positives = 71/287 (24%), Gaps = 38/287 (13%) Query: 3 VVTVATWNV--NSI-RARIHNLAAW----IKENNPDIICLQETKTEDKNFPFETLQSLNY 55 V+ VATWN+ SI +A + + EN+ ++ +QE E L+ Sbjct: 252 VLRVATWNLQSCSIEKANNPGVREVICMTLLENSIKLLAVQEL------LDREALEKFCM 305 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY--- 112 + + + G T L+ + Sbjct: 306 ELNQPTLPNIRKWKGPRGCWKGVVSEKPSGQLPKGVEYCGFLWDTTAGIELKDASSQENV 365 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW--- 169 +GN S + + L L + H Sbjct: 366 QTNGNGRHSYPHPYIAHFKVGMNDLTLVNLHLALAPAAGDNAGKNHDSHKLATFAQTLQE 425 Query: 170 ----ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225 E D + Q+ + + ++ SK+ +D+ Sbjct: 426 TLKGEKDVIILGDFNQAPDSSDHDILRKEKFHHLVPSNTFTNISTKNPQGSKS----LDN 481 Query: 226 IMLSPEATSL-----------LHSARIDTKPRGWTKPSDHTPVIVSL 261 + +S + L + I SDH PV+ Sbjct: 482 MWISRSLKKVFTGHWAVVREGLTNPWIPDNWSWGGVASDHCPVLAEF 528 >gi|329890223|ref|ZP_08268566.1| endonuclease/Exonuclease/phosphatase family protein [Brevundimonas diminuta ATCC 11568] gi|328845524|gb|EGF95088.1| endonuclease/Exonuclease/phosphatase family protein [Brevundimonas diminuta ATCC 11568] Length = 315 Score = 37.5 bits (85), Expect = 2.3, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 13/62 (20%) Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR-GWTKPSDHTPVIVSLDIP 264 ++ + GI IDH+ SP+ + R G SDH PVIV L Sbjct: 266 TWPS----ALPPFLGITIDHVWRSPDLA--------LVERRLGQKTGSDHRPVIVRLSRA 313 Query: 265 EP 266 EP Sbjct: 314 EP 315 >gi|300113189|ref|YP_003759764.1| endonuclease/exonuclease/phosphatase [Nitrosococcus watsonii C-113] gi|299539126|gb|ADJ27443.1| Endonuclease/exonuclease/phosphatase [Nitrosococcus watsonii C-113] Length = 289 Score = 37.5 bits (85), Expect = 2.3, Method: Composition-based stats. Identities = 10/94 (10%), Positives = 24/94 (25%), Gaps = 14/94 (14%) Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227 ++ + + ++ + IDHI+ Sbjct: 179 HNHPYVVVMGDLNCQIHSPELRALLRKTGLKAPVTKIPTYPSWRPK-------RHIDHIL 231 Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +SP ++ + SDH P+ + Sbjct: 232 VSPSL-EVIQVCALAHAV------SDHLPLATEI 258 >gi|289741011|gb|ADD19253.1| glucose-repressible alcohol dehydrogenase transcriptional effector CCR4 [Glossina morsitans morsitans] Length = 627 Score = 37.5 bits (85), Expect = 2.3, Method: Composition-based stats. Identities = 37/294 (12%), Positives = 73/294 (24%), Gaps = 56/294 (19%) Query: 17 RIHNLAAWIKENNPDIICLQE--TK---------TEDKN------FPFETLQSLN----Y 55 R + I N DIICLQE K ED + + Y Sbjct: 331 RKQLIIKEILGYNADIICLQEVDVKFFNFDLQHILEDDQQAFKGLLAQKGICGEGVATFY 390 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI------- 108 +++ I + + I L + T L + Sbjct: 391 NVKRFDLLETRNFNIGENIRVLTIFRDLWQKIQTNEKLAERICDRSTTLQLTLLKMKECE 450 Query: 109 --------GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP 160 + P + I ++ + +I+ R ++L L E A ++ Sbjct: 451 HYLLVANTHLYFHPDADHIRLLQFGLSMLYIEDMYRKLIKQLNLNEENQLAVVFSGDFNS 510 Query: 161 HDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH-----HLYSFWDYYADSW 215 + + + +++ Y+ + + + Sbjct: 511 VPECGIFRLMTEGFVEDDFIDWRSNTEEALAGVSLKQPFRMQSACGTPQYTNFTHAFAA- 569 Query: 216 SKNKGIRIDHIML-SPEA-------TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +D+I S L + PSDH ++ L Sbjct: 570 ------CLDYIFYQSDRLDVEQVVPLPALEELKSHIAIPSVVFPSDHVALVADL 617 >gi|260589618|ref|ZP_05855531.1| putative cell wall binding repeat-containing domain protein [Blautia hansenii DSM 20583] gi|260539858|gb|EEX20427.1| putative cell wall binding repeat-containing domain protein [Blautia hansenii DSM 20583] Length = 2146 Score = 37.5 bits (85), Expect = 2.3, Method: Composition-based stats. Identities = 13/174 (7%), Positives = 39/174 (22%), Gaps = 13/174 (7%) Query: 48 ETLQSLNYHIETC--GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT 105 + + Y+ E+ + V Y +D +++ + T Sbjct: 1953 KEISKHWYYFESNGIMTTGWTEVGEHWYYMDQWGAMMTGWVSVDGHWYYMDQWGAMTTGW 2012 Query: 106 LRIGNLYLPHGNP----ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161 + + Y D ++ A+ + + + + + Sbjct: 2013 VYVNGHYYYMDRWGAMQTGWVSVDGHWYYLNADGAMATGWVYVNGHYYYMDQWGAMQTGW 2072 Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW 215 + +A + + T + W + W Sbjct: 2073 VSVGGHWYYLNADGAMATGWVYVGGYWYYLDQWGAMT-------TGWVQVGNDW 2119 >gi|147801777|emb|CAN61342.1| hypothetical protein VITISV_022199 [Vitis vinifera] Length = 784 Score = 37.5 bits (85), Expect = 2.3, Method: Composition-based stats. Identities = 12/112 (10%), Positives = 37/112 (33%), Gaps = 10/112 (8%) Query: 151 AGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHD---THHLYSF 207 G+++I + + + ++W + R+ + + + ++ Sbjct: 3 VGNFSISCRLRNVEDXLVWMFTGVYEPFSREDRECMWEEIGAIRGIWDDPWCLGGGVLTW 62 Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 + + R+D +++ + PR SDH P+++ Sbjct: 63 ----SGGRNNQAWARLDRFLVTQNWLDHFNGVVQSRLPRTT---SDHFPILL 107 >gi|83593698|ref|YP_427450.1| endonuclease/exonuclease/phosphatase [Rhodospirillum rubrum ATCC 11170] gi|83576612|gb|ABC23163.1| Endonuclease/exonuclease/phosphatase [Rhodospirillum rubrum ATCC 11170] Length = 255 Score = 37.5 bits (85), Expect = 2.3, Method: Composition-based stats. Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 5/38 (13%) Query: 6 VATWNVNSI-----RARIHNLAAWIKENNPDIICLQET 38 +AT+N++S R +A I+ + D+I LQE Sbjct: 19 IATYNIHSCLGTDGAFRPDRVAQAIRALDADVIGLQEV 56 >gi|228924088|ref|ZP_04087364.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228835578|gb|EEM80943.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 334 Score = 37.5 bits (85), Expect = 2.3, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 24/63 (38%), Gaps = 16/63 (25%) Query: 216 SKNKGIRIDHIMLSPEA-----TSLLHSAR-IDTKPRGW----------TKPSDHTPVIV 259 N + +DHI+LSP + ++ I +PSDH PV + Sbjct: 271 EANSHLLLDHILLSPGLSTNSGLRRVQNSGKIHHAEYNNHTVNNGNFRENRPSDHRPVSI 330 Query: 260 SLD 262 L+ Sbjct: 331 LLE 333 >gi|303312829|ref|XP_003066426.1| glucose-repressible alcohol dehydrogenase, putative [Coccidioides posadasii C735 delta SOWgp] gi|240106088|gb|EER24281.1| glucose-repressible alcohol dehydrogenase, putative [Coccidioides posadasii C735 delta SOWgp] gi|320036731|gb|EFW18669.1| glucose-repressible alcohol dehydrogenase transcriptional effector [Coccidioides posadasii str. Silveira] Length = 758 Score = 37.5 bits (85), Expect = 2.3, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 13/22 (59%) Query: 17 RIHNLAAWIKENNPDIICLQET 38 R L I+ ++ DI+CLQE Sbjct: 414 RRDLLLNEIRGHDADIVCLQEI 435 >gi|119192450|ref|XP_001246831.1| hypothetical protein CIMG_00602 [Coccidioides immitis RS] gi|121932279|sp|Q1EA11|CCR4_COCIM RecName: Full=Glucose-repressible alcohol dehydrogenase transcriptional effector; AltName: Full=Carbon catabolite repressor protein 4; AltName: Full=Cytoplasmic deadenylase Length = 687 Score = 37.5 bits (85), Expect = 2.3, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 13/22 (59%) Query: 17 RIHNLAAWIKENNPDIICLQET 38 R L I+ ++ DI+CLQE Sbjct: 343 RRDLLLNEIRGHDADIVCLQEI 364 >gi|314950241|ref|ZP_07853524.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecium TX0082] gi|313643380|gb|EFS07960.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecium TX0082] Length = 284 Score = 37.5 bits (85), Expect = 2.3, Method: Composition-based stats. Identities = 33/285 (11%), Positives = 67/285 (23%), Gaps = 31/285 (10%) Query: 4 VTVATWNVNSIRARI-----HNLAAWIKE---NNPDIICLQETKTEDKNFPFETLQSLN- 54 + T N +S + L + + ++I LQE ++ E ++ Sbjct: 8 MKFMTLNTHS---WLEPEPEKKLQELADKILLEDYEVIALQEI---NQLLESEEVEPAKL 61 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL----RIGN 110 + + + H + I L + + Sbjct: 62 MKFCPVKNQVPIRKDNFAYRLVQLLKEHGKEYFWSWEMSHIGYDKYEEGNALLTKKTLES 121 Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170 L Y + I + + D + Sbjct: 122 QVLTVSQFQKKEDYQTRKILIGKTKIDDQDIFVSSCHFSWWTDKKSGFYFEWKNLENYFL 181 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADS---------WSKN-KG 220 + + + G+ + Y + + W +N + Sbjct: 182 ETRVPLFFLGDFNNPVDSQGYYTVRESCLLLQDSYVVANEKGKAATVEKKIDGWEQNTEK 241 Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 +RID I + RI SDH V + LD+ E Sbjct: 242 LRIDFIFVPEGMQVK-KYQRIFDGI-DSPIISDHYGVEIELDVNE 284 >gi|307200674|gb|EFN80777.1| Protein angel-like protein 2 [Harpegnathos saltator] Length = 475 Score = 37.5 bits (85), Expect = 2.3, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 25/78 (32%), Gaps = 22/78 (28%) Query: 3 VVTVATWNV---N-----------------SIRARIHNLAAWIKENNPDIICLQETKTED 42 + + ++N+ N S + R + I E +IICLQE +D Sbjct: 87 TLRLFSFNILAQNLLDTHSYLYQEHDPAALSWKNRKPLVLQEILEAEANIICLQEV-LKD 145 Query: 43 KNFPF-ETLQSLNYHIET 59 F L Y Sbjct: 146 HLLDFVAPFLELGYEYLY 163 >gi|182439171|ref|YP_001826890.1| hypothetical protein SGR_5378 [Streptomyces griseus subsp. griseus NBRC 13350] gi|178467687|dbj|BAG22207.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus NBRC 13350] Length = 263 Score = 37.5 bits (85), Expect = 2.3, Method: Composition-based stats. Identities = 13/36 (36%), Positives = 21/36 (58%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQE 37 +V+ V ++NV S+R LA I PD++ +QE Sbjct: 20 AVIRVLSYNVRSLRDDTAALARVIHACAPDLVLVQE 55 >gi|69244470|ref|ZP_00602886.1| Endonuclease/exonuclease/phosphatase [Enterococcus faecium DO] gi|257881648|ref|ZP_05661301.1| endonuclease/exonuclease/phosphatase [Enterococcus faecium 1,231,502] gi|258615343|ref|ZP_05713113.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecium DO] gi|293562857|ref|ZP_06677329.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecium E1162] gi|294623334|ref|ZP_06702194.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecium U0317] gi|68196411|gb|EAN10839.1| Endonuclease/exonuclease/phosphatase [Enterococcus faecium DO] gi|257817306|gb|EEV44634.1| endonuclease/exonuclease/phosphatase [Enterococcus faecium 1,231,502] gi|291597228|gb|EFF28419.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecium U0317] gi|291605181|gb|EFF34643.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecium E1162] Length = 277 Score = 37.5 bits (85), Expect = 2.3, Method: Composition-based stats. Identities = 33/285 (11%), Positives = 67/285 (23%), Gaps = 31/285 (10%) Query: 4 VTVATWNVNSIRARI-----HNLAAWIKE---NNPDIICLQETKTEDKNFPFETLQSLN- 54 + T N +S + L + + ++I LQE ++ E ++ Sbjct: 1 MKFMTLNTHS---WLEPEPEKKLQELADKILLEDYEVIALQEI---NQLLESEEVEPAKL 54 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL----RIGN 110 + + + H + I L + + Sbjct: 55 MKFCPVKNQVPIRKDNFAYRLVQLLKEHGKEYFWSWEMSHIGYDKYEEGNALLTKKTLES 114 Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170 L Y + I + + D + Sbjct: 115 QVLTVSQFQKKEDYQTRKILIGKTKIDDQDIFVSSCHFSWWTDKKSGFYFEWKNLENYFL 174 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADS---------WSKN-KG 220 + + + G+ + Y + + W +N + Sbjct: 175 ETRVPLFFLGDFNNPVDSQGYYTVRESCLLLQDSYVVANEKGKAATVEKKIDGWEQNTEK 234 Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 +RID I + RI SDH V + LD+ E Sbjct: 235 LRIDFIFVPEGMQVK-KYQRIFDGI-DSPIISDHYGVEIELDVNE 277 >gi|253571723|ref|ZP_04849129.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|251838931|gb|EES67016.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] Length = 314 Score = 37.5 bits (85), Expect = 2.3, Method: Composition-based stats. Identities = 17/193 (8%), Positives = 51/193 (26%), Gaps = 7/193 (3%) Query: 20 NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEI 79 + + + + D++ L E + + K F ++ L + ++++ + + Sbjct: 46 GIIDVLDQMDADVVFLCEIR-DGKQFIPHVIEELEKRGKHYYGETFDLAIGVLSKFKPDS 104 Query: 80 VTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFAS 139 T D ++ TI Q + + +L + + + K+ + + Sbjct: 105 WTKCCIVPGDEGRAMVKMVATIEGQPVSFYSCHLDYRHYQCYMPRGYNGTTWKKMDKPIT 164 Query: 140 QR------LELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTD 193 + Q I +++ + Sbjct: 165 DEEEVLKANRQSFRDETIRAFIQEVQSDIQQGRPIIMGGDFNEPSHLDWQADTKDLWDHN 224 Query: 194 AIRATHDTHHLYS 206 D + S Sbjct: 225 GAIIHWDCSMMLS 237 >gi|256396175|ref|YP_003117739.1| endonuclease/exonuclease/phosphatase [Catenulispora acidiphila DSM 44928] gi|256362401|gb|ACU75898.1| Endonuclease/exonuclease/phosphatase [Catenulispora acidiphila DSM 44928] Length = 1007 Score = 37.5 bits (85), Expect = 2.3, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 9/43 (20%) Query: 4 VTVATWNV-------NSIRARIHN--LAAWIKENNPDIICLQE 37 + + TWN + IR L A ++ + D+I LQE Sbjct: 122 LRILTWNTLWDRYDKDLIRTAERRPMLLAALRAADVDVIALQE 164 >gi|189194932|ref|XP_001933804.1| conserved hypothetical protein [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187979683|gb|EDU46309.1| conserved hypothetical protein [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 410 Score = 37.5 bits (85), Expect = 2.3, Method: Composition-based stats. Identities = 31/226 (13%), Positives = 60/226 (26%), Gaps = 20/226 (8%) Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + N A +T L +F A + ++ P Sbjct: 190 WLQEMNDEAEWRPIGLRLHLTLLRLTRSREHYKFDFAVLSQIRTHIKSWWQQTPLPTTTA 249 Query: 121 STKYDDKISWIKRFLRFASQRLEL--EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 S + ++ + +AG + IIP I D Sbjct: 250 SPTFQKWHNFDQEQWMPFVSHKFPRPGIRHQWAGSFRIIPGYSKIAGRGIIAGDFNPVPP 309 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK------------GIRIDHI 226 + ++ DA H +++ Y S+ N+ G+ I Sbjct: 310 EDDDLVRANDLT--DAWTQLHPNSPGHTWGVYGEQSFPSNRFDKVALFNLSPSGMGI--- 364 Query: 227 MLSPEATSLLHSARID-TKPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271 + + E +D T+ SDH + + E R + + Sbjct: 365 LQTSELRFCSEKTSVDATESIPKAHFSDHLGLWCDVGWEEDRPRPE 410 >gi|147864195|emb|CAN83027.1| hypothetical protein VITISV_012956 [Vitis vinifera] Length = 874 Score = 37.5 bits (85), Expect = 2.3, Method: Composition-based stats. Identities = 10/61 (16%), Positives = 22/61 (36%), Gaps = 9/61 (14%) Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP-SDHTPVIV 259 +++ + + R+D +++P R +P SDH PV++ Sbjct: 390 QGGSFTW----SGGLNNQSRARLDRFLVTPCWLDQFSRVV----QRRLPRPTSDHFPVLL 441 Query: 260 S 260 Sbjct: 442 E 442 >gi|125579657|gb|EAZ20803.1| hypothetical protein OsJ_36426 [Oryza sativa Japonica Group] Length = 787 Score = 37.5 bits (85), Expect = 2.3, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 25/58 (43%), Gaps = 9/58 (15%) Query: 204 LYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI--DTKPRGWTKPSDHTPVIV 259 Y++ D + N +R+D + + + +AR+ T R SDH P+ V Sbjct: 63 PYTY-DNRREGR-NNIRVRLDRALADNDWREMFGNARVSHLTSTR-----SDHCPISV 113 >gi|29345579|ref|NP_809082.1| hypothetical protein BT_0169 [Bacteroides thetaiotaomicron VPI-5482] gi|29337471|gb|AAO75276.1| putative endonuclease/exonuclease/phosphatase [Bacteroides thetaiotaomicron VPI-5482] Length = 351 Score = 37.5 bits (85), Expect = 2.3, Method: Composition-based stats. Identities = 17/193 (8%), Positives = 51/193 (26%), Gaps = 7/193 (3%) Query: 20 NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEI 79 + + + + D++ L E + + K F ++ L + ++++ + + Sbjct: 46 GIIDVLDQMDADVVFLCEIR-DGKQFIPHVIEELEKRGKHYYGETFDLAIGVLSKFKPDS 104 Query: 80 VTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFAS 139 T D ++ TI Q + + +L + + + K+ + + Sbjct: 105 WTKCCIVPGDEGRAMVKMVATIEGQPVSFYSCHLDYRHYQCYMPRGYNGTTWKKMDKPIT 164 Query: 140 QR------LELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTD 193 + Q I +++ + Sbjct: 165 DEEEVLKANRQSFRDETIRAFIQEVQSDIQQGRPIIMGGDFNEPSHLDWQADTKDLWDHN 224 Query: 194 AIRATHDTHHLYS 206 D + S Sbjct: 225 GAIIHWDCSMMLS 237 >gi|307103438|gb|EFN51698.1| hypothetical protein CHLNCDRAFT_54968 [Chlorella variabilis] Length = 500 Score = 37.5 bits (85), Expect = 2.4, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 3/54 (5%) Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQN 277 D+ + S L + +D+ + SDH ++ L++ P Q+DST+Q Sbjct: 206 DYWLASASLLPRLPTMAVDSWGLAA-QHSDHATLL--LELAAPPAVQRDSTAQQ 256 >gi|298384499|ref|ZP_06994059.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. 1_1_14] gi|298262778|gb|EFI05642.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. 1_1_14] Length = 351 Score = 37.5 bits (85), Expect = 2.4, Method: Composition-based stats. Identities = 17/193 (8%), Positives = 51/193 (26%), Gaps = 7/193 (3%) Query: 20 NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEI 79 + + + + D++ L E + + K F ++ L + ++++ + + Sbjct: 46 GIIDVLDQMDADVVFLCEIR-DGKQFIPHVIEELEKRGKHYYGETFDLAIGVLSKFKPDS 104 Query: 80 VTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFAS 139 T D ++ TI Q + + +L + + + K+ + + Sbjct: 105 WTKCCIVPGDEGRAMVKMVATIEGQPVSFYSCHLDYRHYQCYMPRGYNGTTWKKMDKPIT 164 Query: 140 QR------LELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTD 193 + Q I +++ + Sbjct: 165 DEEEVLKANRQSFRDETIRAFIQEVQSDIQQGRPIIMGGDFNEPSHLDWQADTKDLWDHN 224 Query: 194 AIRATHDTHHLYS 206 D + S Sbjct: 225 GAVIHWDCSMMLS 237 >gi|294674281|ref|YP_003574897.1| endonuclease/exonuclease/phosphatase family protein [Prevotella ruminicola 23] gi|294473158|gb|ADE82547.1| endonuclease/exonuclease/phosphatase family protein [Prevotella ruminicola 23] Length = 293 Score = 37.5 bits (85), Expect = 2.4, Method: Composition-based stats. Identities = 37/258 (14%), Positives = 61/258 (23%), Gaps = 37/258 (14%) Query: 28 NNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDD 87 +PDI QE + Q +Y G+ S L Sbjct: 47 EHPDIFGAQEV--LESQRQDLLKQLTDYDCIGLGRDDGKHAGEHSNIFYDRNKIKLLDHG 104 Query: 88 LDVQARFIEATFTINTQ-TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEE 146 + E +RI + + Y + + E Sbjct: 105 DFWLSETPEKPGLGWDAACVRICSWGYFKLKGTSLKFYYFNL-----HMDHVGTVARREG 159 Query: 147 PLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYS 206 + I + + D + + + + F A + S Sbjct: 160 AKLVVQRIKEIAKGKPVVLTGDFNVDQTNEIYGIFTQSGVLDDSFEKAQFRFAENGTFNS 219 Query: 207 FWDYYADSWSKNKGIRIDHIMLSPEAT-------------------SLLHSA----RIDT 243 + RIDH+ +SP T + A I+ Sbjct: 220 W------DPELKTASRIDHVFVSPAFTVQRYGVLTNTYWSEAPQQTDTVKGADAPQEINF 273 Query: 244 KPRGWTKPSDHTPVIVSL 261 + PSDH PV V L Sbjct: 274 QKHQKRLPSDHYPVFVRL 291 >gi|282891647|ref|ZP_06300134.1| hypothetical protein pah_c188o013 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281498437|gb|EFB40769.1| hypothetical protein pah_c188o013 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 192 Score = 37.5 bits (85), Expect = 2.4, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 17/52 (32%), Gaps = 13/52 (25%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRG-------------WTKPSDHTPVIVSL 261 +D++++S +H D + SDH P+ + Sbjct: 131 LDYVLVSKSLKDRVHMFEPDDQELSLANLAEDTVHFDPMLLFSDHRPLWTKI 182 >gi|147798313|emb|CAN65634.1| hypothetical protein VITISV_007119 [Vitis vinifera] Length = 1703 Score = 37.5 bits (85), Expect = 2.4, Method: Composition-based stats. Identities = 10/60 (16%), Positives = 23/60 (38%), Gaps = 9/60 (15%) Query: 201 THHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 ++S+ + N+ R+D +++ L + R SDH P+++ Sbjct: 369 QGGVFSWSEGR-----NNQSWARLDRFLVTQSWLDLFRGVV---QSRLSRPTSDHFPILL 420 >gi|115751701|ref|XP_795384.2| PREDICTED: similar to bucentaur [Strongylocentrotus purpuratus] gi|115934873|ref|XP_001188264.1| PREDICTED: similar to bucentaur [Strongylocentrotus purpuratus] Length = 426 Score = 37.5 bits (85), Expect = 2.4, Method: Composition-based stats. Identities = 10/59 (16%), Positives = 21/59 (35%), Gaps = 5/59 (8%) Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240 + N H +LY++ +N+ ID+I++ S + A+ Sbjct: 225 AEFCHVNNLILTNTTFDHHKRNLYTWKS--PGDRYRNQ---IDYILIRRRWKSSIKDAK 278 >gi|328859868|gb|EGG08976.1| hypothetical protein MELLADRAFT_61521 [Melampsora larici-populina 98AG31] Length = 152 Score = 37.5 bits (85), Expect = 2.4, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 18/44 (40%), Gaps = 1/44 (2%) Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPR 267 D SPE + DT+ + SDH ++ LD+P Sbjct: 77 DLQWTSPECYDWATTCVTDTQF-KHSHFSDHMAILTELDLPANP 119 >gi|221640330|ref|YP_002526592.1| hypothetical protein RSKD131_2231 [Rhodobacter sphaeroides KD131] gi|221161111|gb|ACM02091.1| Hypothetical Protein RSKD131_2231 [Rhodobacter sphaeroides KD131] Length = 309 Score = 37.5 bits (85), Expect = 2.4, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 23/50 (46%), Gaps = 8/50 (16%) Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWT------KPSDHTPVIVSLDIP 264 +R D+I+ + + ++ + P G + S H PV V LD+P Sbjct: 262 LRTDYILPARGL--HVTASGVLWPPPGDPLADVAAQASRHRPVWVELDLP 309 >gi|169787480|gb|ACA80179.1| putative DNA lyase [Colletotrichum cereale] Length = 233 Score = 37.5 bits (85), Expect = 2.4, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 22/57 (38%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81 + DI+ +QETK + K+ + + + + K G + ++ Y Sbjct: 2 FEILEADIVIMQETKIQRKDLGDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATCC 58 >gi|169787476|gb|ACA80177.1| putative DNA lyase [Colletotrichum cereale] Length = 233 Score = 37.5 bits (85), Expect = 2.4, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 22/57 (38%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81 + DI+ +QETK + K+ + + + + K G + ++ Y Sbjct: 2 FEILEADIVIMQETKIQRKDLGDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATCC 58 >gi|169787414|gb|ACA80146.1| putative DNA lyase [Colletotrichum cereale] Length = 233 Score = 37.5 bits (85), Expect = 2.4, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 22/57 (38%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81 + DI+ +QETK + K+ + + + + K G + ++ Y Sbjct: 2 FEILEADIVIMQETKIQRKDLGDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATCC 58 >gi|169787330|gb|ACA80104.1| putative DNA lyase [Colletotrichum cereale] gi|169787412|gb|ACA80145.1| putative DNA lyase [Colletotrichum cereale] gi|169787430|gb|ACA80154.1| putative DNA lyase [Colletotrichum cereale] gi|169787458|gb|ACA80168.1| putative DNA lyase [Colletotrichum cereale] gi|169787470|gb|ACA80174.1| putative DNA lyase [Colletotrichum cereale] Length = 233 Score = 37.5 bits (85), Expect = 2.4, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 22/57 (38%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81 + DI+ +QETK + K+ + + + + K G + ++ Y Sbjct: 2 FEILEADIVIMQETKIQRKDLGDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATCC 58 >gi|169787232|gb|ACA80055.1| putative DNA lyase [Colletotrichum cereale] gi|169787440|gb|ACA80159.1| putative DNA lyase [Colletotrichum cereale] gi|169787442|gb|ACA80160.1| putative DNA lyase [Colletotrichum cereale] Length = 233 Score = 37.5 bits (85), Expect = 2.4, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 22/57 (38%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81 + DI+ +QETK + K+ + + + + K G + ++ Y Sbjct: 2 FEILEADIVIMQETKIQRKDLGDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATCC 58 >gi|313224249|emb|CBY20038.1| unnamed protein product [Oikopleura dioica] gi|313245969|emb|CBY34943.1| unnamed protein product [Oikopleura dioica] Length = 602 Score = 37.5 bits (85), Expect = 2.4, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 18/50 (36%), Gaps = 12/50 (24%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55 +WN R H L I N DI+CLQE + + Y Sbjct: 296 FVSWN-----HRSHLLLDEIIGYNADIVCLQE-------LDSKMFRGEFY 333 >gi|218128486|ref|ZP_03457290.1| hypothetical protein BACEGG_00056 [Bacteroides eggerthii DSM 20697] gi|217989377|gb|EEC55690.1| hypothetical protein BACEGG_00056 [Bacteroides eggerthii DSM 20697] Length = 511 Score = 37.5 bits (85), Expect = 2.4, Method: Composition-based stats. Identities = 18/138 (13%), Positives = 40/138 (28%), Gaps = 9/138 (6%) Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYN-IIPQPHDCYNPIIWENDACFT 176 I + + + +E+ + ++ I + +I EN Sbjct: 140 YIATDWLHHFPVAMCAMENGKNVAIEVPSAMNLKECWDLINMSEKTRKHCMILENCCYDW 199 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWD-YYADSWSKNKGIRIDH-------IML 228 E+ + H+L FW+ Y+ + S G R+D+ + Sbjct: 200 FEMNTLNMAQHGVFGEVIRAQGAYIHNLSPFWNHYWKNGESDKLGWRLDYNMRHRGDVYA 259 Query: 229 SPEATSLLHSARIDTKPR 246 + + + I R Sbjct: 260 THGLGPVAQALDIHRGDR 277 >gi|241762981|ref|ZP_04761043.1| Endonuclease/exonuclease/phosphatase [Acidovorax delafieldii 2AN] gi|241367933|gb|EER62152.1| Endonuclease/exonuclease/phosphatase [Acidovorax delafieldii 2AN] Length = 431 Score = 37.5 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 11/51 (21%), Positives = 22/51 (43%), Gaps = 13/51 (25%) Query: 223 IDHIMLSPEATSLLHS-ARIDTKPRGW------TKP------SDHTPVIVS 260 +DHI++S + + + ++ P G +P SDH P++ Sbjct: 378 LDHILVSQSLAAAVSNTIKVSIGPFGGSLLPSVNRPDPLLAVSDHCPLVAD 428 >gi|169787284|gb|ACA80081.1| putative DNA lyase [Glomerella graminicola] Length = 233 Score = 37.5 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 10/57 (17%), Positives = 22/57 (38%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81 + DI+ +QETK + K+ + + + + K G + ++ Y Sbjct: 2 FEILEADIVIMQETKIQRKDLRDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNAKCC 58 >gi|21686921|gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza sativa Japonica Group] Length = 1833 Score = 37.5 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 22/215 (10%), Positives = 60/215 (27%), Gaps = 12/215 (5%) Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 + + + + ++ + + + + + Sbjct: 1 MGKNTQFWIHRPKIVFLAETRQDQYMVQNRIGLRRCFTVNGVGKGGGLALFWDESMNVVL 60 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172 + + + R + + L+++ I D + I N+ Sbjct: 61 KSYNSRHIDVLITELDCCTWRATFVYGEPRAQDRHLMWSLLRRIRSNSGDPWLMIGDFNE 120 Query: 173 ACFTLEVRQS-------FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225 A + E + + + + + ++F + + N +R+D Sbjct: 121 AMWQTEHKSHRKRSESQMRDFREVLSECDLHDIGFQGAPWTFCNMQREGR--NVKVRLDR 178 Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 + SP +S A I T SDH P+++ Sbjct: 179 GVASPAWSSRFPQAVI---THLTTPSSDHAPLLLE 210 >gi|282877586|ref|ZP_06286401.1| endonuclease/exonuclease/phosphatase family protein [Prevotella buccalis ATCC 35310] gi|281300158|gb|EFA92512.1| endonuclease/exonuclease/phosphatase family protein [Prevotella buccalis ATCC 35310] Length = 316 Score = 37.5 bits (85), Expect = 2.5, Method: Composition-based stats. Identities = 12/64 (18%), Positives = 18/64 (28%), Gaps = 21/64 (32%) Query: 223 IDHIMLSPEATSLLHSARIDTKP---------------------RGWTKPSDHTPVIVSL 261 +DHIM+ L + P R SDH P++ L Sbjct: 253 LDHIMVDEHTAQRLVECHVHDAPFLLKEDEKYGGVQPRRNYLGPRYQNGFSDHLPLVARL 312 Query: 262 DIPE 265 + Sbjct: 313 RWDD 316 >gi|307111955|gb|EFN60189.1| hypothetical protein CHLNCDRAFT_56640 [Chlorella variabilis] Length = 581 Score = 37.1 bits (84), Expect = 2.5, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 3/54 (5%) Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQN 277 D+ + S L + +D+ + SDH ++ L++ P Q+DST+Q Sbjct: 231 DYWLASASLLPRLPTMAVDSWGLAA-QHSDHATLL--LELAAPPAVQRDSTAQQ 281 >gi|126282271|ref|XP_001367467.1| PREDICTED: similar to KIAA0759 protein [Monodelphis domestica] Length = 671 Score = 37.1 bits (84), Expect = 2.5, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 28/75 (37%), Gaps = 10/75 (13%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQ 62 + WN R NL + +PDI+CLQE ++ ++ + L+ + + + Sbjct: 273 ILNWN-----YRFSNLVQEFQHWDPDILCLQEV--QEDHYWEQLEPTLRMMGFTCFYKRR 325 Query: 63 KSYNGVAILSKYQPI 77 Y+ Sbjct: 326 TGCKTDGCAVCYKHT 340 >gi|71274786|ref|ZP_00651074.1| Endonuclease/exonuclease/phosphatase [Xylella fastidiosa Dixon] gi|71901074|ref|ZP_00683183.1| Endonuclease/exonuclease/phosphatase [Xylella fastidiosa Ann-1] gi|170729968|ref|YP_001775401.1| hypothetical protein Xfasm12_0781 [Xylella fastidiosa M12] gi|71164518|gb|EAO14232.1| Endonuclease/exonuclease/phosphatase [Xylella fastidiosa Dixon] gi|71729156|gb|EAO31278.1| Endonuclease/exonuclease/phosphatase [Xylella fastidiosa Ann-1] gi|167964761|gb|ACA11771.1| conserved hypothetical protein [Xylella fastidiosa M12] Length = 256 Score = 37.1 bits (84), Expect = 2.5, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 17/43 (39%), Gaps = 7/43 (16%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 IDHI++S I SDH V + L IP+ Sbjct: 217 IDHILVSEGF-------YICKTEAVPAAFSDHLAVSMDLVIPQ 252 >gi|119961986|ref|YP_946639.1| 5'-nucleotidase family protein [Arthrobacter aurescens TC1] gi|119948845|gb|ABM07756.1| putative 5'-nucleotidase family protein [Arthrobacter aurescens TC1] Length = 1509 Score = 37.1 bits (84), Expect = 2.5, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 26/71 (36%), Gaps = 21/71 (29%) Query: 223 IDHIMLSPEATSLLHSARI---------------------DTKPRGWTKPSDHTPVIVSL 261 +DHI+ SP A ++ I + + + SDH PV+V L Sbjct: 774 LDHILASPAAHKVVTGTDIWNINSVESVALEYSRYNNNVTNYYAQDEFRASDHDPVVVGL 833 Query: 262 DIPEPRKKQQD 272 ++ + D Sbjct: 834 NLTADQPATVD 844 >gi|327474509|gb|EGF19914.1| RgfB protein [Streptococcus sanguinis SK408] gi|327490066|gb|EGF21854.1| RgfB protein [Streptococcus sanguinis SK1058] Length = 271 Score = 37.1 bits (84), Expect = 2.6, Method: Composition-based stats. Identities = 28/250 (11%), Positives = 68/250 (27%), Gaps = 21/250 (8%) Query: 18 IHNLAAWIKENNPDIICLQETK--TEDKNFPFETLQSLNYHIETCGQKSYNGVAILS--- 72 ++ LA I + D+ICLQE TE + Y + + L Sbjct: 21 LNELAERILQEKYDVICLQEVNQLTESEQVVQAPF----YQAVEGAIEIHQDHFALCLVE 76 Query: 73 ------KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDD 126 + G D+ + I + + + + + P + Sbjct: 77 KLAEAGLDYHWSWAYNHIGFDIYNEGVAILSRNPMAPREVLVSEANDPRDYHTRKVLLAE 136 Query: 127 KISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL 186 + + ++ G++ + + + +Q +Q + Sbjct: 137 TEVDGQLLTIASCHLSWWDKGFQ--GEWAKLEEELLKAESSLVLMGDFNNPVGQQGYQTI 194 Query: 187 QN--MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK 244 + D+ + + A ++ID++ S + + + Sbjct: 195 LASPLKLQDSHTVAKEAIGEATVEGTIAGWDDNKHALKIDYVFTSQGMD--VERSAVVFD 252 Query: 245 PRGWTKPSDH 254 + SDH Sbjct: 253 GKETPVVSDH 262 >gi|317495662|ref|ZP_07954028.1| 4-alpha-glucanotransferase [Gemella moribillum M424] gi|316914217|gb|EFV35697.1| 4-alpha-glucanotransferase [Gemella moribillum M424] Length = 501 Score = 37.1 bits (84), Expect = 2.6, Method: Composition-based stats. Identities = 17/163 (10%), Positives = 39/163 (23%), Gaps = 4/163 (2%) Query: 67 GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDD 126 + L Y + G + I+ + L + + Sbjct: 141 NASWLVDYAEYMAIKENFGYQSFIHWDEDIKRAEISAREKYCIELQDSIRYYTITQYFFF 200 Query: 127 KISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL 186 K + + + + I+ ++ + E++ + + Sbjct: 201 KQWLALKNYANSKGIKIIGDMPIYVSADSVEMWTMPE-LFKVNEDNEPLYVAGCPADDFS 259 Query: 187 QNMGFTDA--IRATHDTHHLYSFWDYYAD-SWSKNKGIRIDHI 226 YS+W Y S+ +RIDH Sbjct: 260 PTGQLWGNPIYNWEKHREQNYSWWVYRVQESFKIYDVLRIDHF 302 >gi|254491940|ref|ZP_05105119.1| endonuclease/exonuclease/phosphatase family [Methylophaga thiooxidans DMS010] gi|224463418|gb|EEF79688.1| endonuclease/exonuclease/phosphatase family [Methylophaga thiooxydans DMS010] Length = 250 Score = 37.1 bits (84), Expect = 2.6, Method: Composition-based stats. Identities = 24/266 (9%), Positives = 66/266 (24%), Gaps = 27/266 (10%) Query: 4 VTVATWNVN-SIRAR-----IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57 + + T+N++ +H + + N DI+ LQE Sbjct: 6 LRILTYNLHKGFNTSNREFTLHPIRDALVATNADIMLLQEI--------QGAHSEHGLTH 57 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 + ++ + + + + + + + + + Sbjct: 58 QHWPKEPHFEFLASDVWPHYAYAKNAVYSVGHHGNAILSKYPLQSWENINVSPFTWASRS 117 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + + + + +E F + F Sbjct: 118 LLHGEIKLPWSDDVLHIICIHLGLIGMERRRQFVTL--CERIDAHVPHDAPLIVAGDFND 175 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 Q+ ++L T + ++ + RI + + P Sbjct: 176 WAGQAEKRLSQHLNLKEAFRTLHNRYARTWPSWMPVLKMD----RIYYRGMEPIICERPP 231 Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263 + W + SDH P++ S ++ Sbjct: 232 HST-------WNRLSDHAPLLASFEL 250 >gi|319645540|ref|ZP_07999772.1| hypothetical protein HMPREF1012_00805 [Bacillus sp. BT1B_CT2] gi|317392426|gb|EFV73221.1| hypothetical protein HMPREF1012_00805 [Bacillus sp. BT1B_CT2] Length = 214 Score = 37.1 bits (84), Expect = 2.6, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 20/58 (34%), Gaps = 12/58 (20%) Query: 200 DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257 ++ + R+D+I LSP + +A I SDH P+ Sbjct: 163 QYGQGFTHPSHRPR-------RRLDYIFLSPSF--HVSAAEI---VAVDPNASDHLPL 208 >gi|317475689|ref|ZP_07934949.1| oxidoreductase family protein [Bacteroides eggerthii 1_2_48FAA] gi|316908145|gb|EFV29839.1| oxidoreductase family protein [Bacteroides eggerthii 1_2_48FAA] Length = 511 Score = 37.1 bits (84), Expect = 2.6, Method: Composition-based stats. Identities = 18/138 (13%), Positives = 40/138 (28%), Gaps = 9/138 (6%) Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYN-IIPQPHDCYNPIIWENDACFT 176 I + + + +E+ + ++ I + +I EN Sbjct: 140 YIATDWLHHFPVAMCAMENGKNVAIEVPSAMNLKECWDLINMSEKTRKHCMILENCCYDW 199 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWD-YYADSWSKNKGIRIDH-------IML 228 E+ + H+L FW+ Y+ + S G R+D+ + Sbjct: 200 FEMNTLNMAQHGVFGEVIRAQGAYIHNLSPFWNHYWKNGESDKLGWRLDYNMRHRGDVYA 259 Query: 229 SPEATSLLHSARIDTKPR 246 + + + I R Sbjct: 260 THGLGPVAQALDIHRGDR 277 >gi|302832782|ref|XP_002947955.1| hypothetical protein VOLCADRAFT_88385 [Volvox carteri f. nagariensis] gi|300266757|gb|EFJ50943.1| hypothetical protein VOLCADRAFT_88385 [Volvox carteri f. nagariensis] Length = 1491 Score = 37.1 bits (84), Expect = 2.6, Method: Composition-based stats. Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 3/35 (8%) Query: 7 ATWNVNSIRARIHNLAAWIK-ENNPDI--ICLQET 38 ATWNVN R +L W++ DI I LQE Sbjct: 1039 ATWNVNETRPASQSLRKWLEPAAKADIVSISLQEV 1073 >gi|239928478|ref|ZP_04685431.1| hypothetical protein SghaA1_09638 [Streptomyces ghanaensis ATCC 14672] gi|291436804|ref|ZP_06576194.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] gi|291339699|gb|EFE66655.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] Length = 290 Score = 37.1 bits (84), Expect = 2.6, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 7/42 (16%) Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 RID + +SP+ T + A T+ SDH PV+ L + Sbjct: 251 RIDLVTVSPDIT--VVGAE-----AVATRASDHRPVVADLRL 285 >gi|158341378|ref|YP_001522543.1| hypothetical protein AM1_G0049 [Acaryochloris marina MBIC11017] gi|158311619|gb|ABW33229.1| hypothetical protein AM1_G0049 [Acaryochloris marina MBIC11017] Length = 401 Score = 37.1 bits (84), Expect = 2.6, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 11/50 (22%) Query: 223 IDHIMLSPEATSLLHSARI--------DTKPRGWTKPSDHTPVIVSLDIP 264 +D I LS +A + + I D P G SDH PV +D+ Sbjct: 237 LDFIFLSGDAKKWSNQSEILFKGSSFCDNDPTG---ASDHFPVQAIIDLD 283 >gi|21241048|ref|NP_640630.1| nuclease [Xanthomonas axonopodis pv. citri str. 306] gi|21106341|gb|AAM35166.1| nuclease [Xanthomonas axonopodis pv. citri str. 306] Length = 609 Score = 37.1 bits (84), Expect = 2.6, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 22/56 (39%), Gaps = 14/56 (25%) Query: 222 RIDHIMLSPEATSLLHSA---RIDTKPR-----------GWTKPSDHTPVIVSLDI 263 R+DH +LSP L A ++ G + SDH PV++ + Sbjct: 554 RLDHALLSPAMAKQLRGAAEWHVNADVMDAAGYAKRNLPGPWRSSDHDPVLLGFSL 609 >gi|268318329|ref|YP_003292048.1| glucosamine-6-phosphate isomerase [Rhodothermus marinus DSM 4252] gi|262335863|gb|ACY49660.1| glucosamine-6-phosphate isomerase [Rhodothermus marinus DSM 4252] Length = 642 Score = 37.1 bits (84), Expect = 2.6, Method: Composition-based stats. Identities = 25/208 (12%), Positives = 47/208 (22%), Gaps = 19/208 (9%) Query: 15 RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKY 74 RAR + + P E +Q L HI + V L+ Sbjct: 426 RARQQEILDFFARKKP------------GEVDLEVIQKLKAHIRYAEAVAGIEVVGLTAE 473 Query: 75 QPIEIVTHLPGDDLDVQARFIEATFTINTQTLR--IGNLYLPHGNPITSTKYDDKISWIK 132 + + EA I L + G+ Sbjct: 474 HARFLDMPFYKTGTVRKDPIGEADIRIVLDLLEEIHPHHIFVAGDLSDPHGTHRMCYTAI 533 Query: 133 RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192 + R E Y Q + + ++ + L+ + Sbjct: 534 QQALQRYHRAHPREEWPLVWLYRGAWQEWEVHQADVFLPMSKADLDRKIEAIFKHESQKD 593 Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKG 220 A+ + W + +N+G Sbjct: 594 RAMFPGAYDDREF--W---QRARDRNRG 616 >gi|145615065|ref|XP_001414248.1| hypothetical protein MGG_13020 [Magnaporthe oryzae 70-15] gi|145021989|gb|EDK06009.1| hypothetical protein MGG_13020 [Magnaporthe oryzae 70-15] Length = 697 Score = 37.1 bits (84), Expect = 2.6, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 3/50 (6%) Query: 17 RIHNLAAWIKENNPDIICLQETKTED--KNFPFETLQSLNYHIETCGQKS 64 R + I+E + D +CLQE TE ++F E L L+Y + Sbjct: 353 RRRKIYQEIEERDADFLCLQEVTTEAFREDFSPE-LAKLDYKGIHFPRTK 401 >gi|288802726|ref|ZP_06408164.1| endonuclease/Exonuclease/phosphatase [Prevotella melaninogenica D18] gi|288334876|gb|EFC73313.1| endonuclease/Exonuclease/phosphatase [Prevotella melaninogenica D18] Length = 324 Score = 37.1 bits (84), Expect = 2.6, Method: Composition-based stats. Identities = 30/258 (11%), Positives = 65/258 (25%), Gaps = 44/258 (17%) Query: 30 PDIICLQETKTEDKNFPFET-----LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLP 84 PDI+ L E E+ + F+ L+ Y G+ + Y P Sbjct: 83 PDIVGLCEV--ENDSVLFDLTRRSLLRKARYEYVMTASNDARGIDVALLYSPFSFRLIKA 140 Query: 85 GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL 144 + + + T + + G+ + ++ + Sbjct: 141 DTIRVIPMKEMRPTRD-----ILHVEGEIESGDTLHVFLLHAPSRMGGELYSRPFRKHVM 195 Query: 145 EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL 204 E+ ++ + + Q + + + + Sbjct: 196 EQLCNVIDSLRRQYVEP--KLLVMGDFNDYADSPSLQLAYEHGLINVSAEAHGCNGAKGT 253 Query: 205 YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI---------------------DT 243 Y + +W +D I++S S + RI Sbjct: 254 YRY----HGAWGS-----LDQILVSKNLRSWMIDCRINDARFLLEEDTKYGGVKPRRNYN 304 Query: 244 KPRGWTKPSDHTPVIVSL 261 R SDH P+++ L Sbjct: 305 GMRFNNGFSDHLPLVLRL 322 >gi|124360463|gb|ABN08473.1| reverse transcriptase - beet retrotransposon, putative [Medicago truncatula] Length = 297 Score = 37.1 bits (84), Expect = 2.6, Method: Composition-based stats. Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 3/41 (7%) Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 R+D +LS E L + + RG SDH P+I+S+D Sbjct: 14 RLDWFLLSEEWCLLWSNCLQIAQLRGL---SDHCPLILSVD 51 >gi|257886279|ref|ZP_05665932.1| endonuclease/exonuclease/phosphatase [Enterococcus faecium 1,231,501] gi|257822135|gb|EEV49265.1| endonuclease/exonuclease/phosphatase [Enterococcus faecium 1,231,501] Length = 274 Score = 37.1 bits (84), Expect = 2.7, Method: Composition-based stats. Identities = 31/265 (11%), Positives = 62/265 (23%), Gaps = 23/265 (8%) Query: 19 HNLAAWIKE---NNPDIICLQETKTEDKNFPFETLQSLN-YHIETCGQKSYNGVAILSKY 74 L + + ++I LQE ++ E ++ + + Sbjct: 15 KKLQELADKILLEDYEVIALQEI---NQLLESEEVEPAKLMKFCPVKNQVPIRKDNFAYR 71 Query: 75 QPIEIVTHLPGDDLDVQARFIEATFTINTQTL----RIGNLYLPHGNPITSTKYDDKISW 130 + H + I L + + L Y + Sbjct: 72 LVQLLKEHGKEYFWSWEMSHIGYDKYEEGNALLAKKTLESQVLTVSQSQKKEDYQTRKIL 131 Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG 190 I + + D + + + + G Sbjct: 132 IGKTKIDDQDIFVSSCHFSWWTDKKSGFYFEWKNLENYFLETRVPLFFLGDFNNPVDSQG 191 Query: 191 FTDAIRATHDTHHLYSFWDYYADS---------WSKN-KGIRIDHIMLSPEATSLLHSAR 240 + + Y + + W +N + +RID I +S R Sbjct: 192 YYTVRESCLLLQDSYVVANEKGKAATVEKKIDGWEQNTEKLRIDFIFVSEGMQVK-KYQR 250 Query: 241 IDTKPRGWTKPSDHTPVIVSLDIPE 265 I SDH V + LD+ E Sbjct: 251 IFDGI-DSPIISDHYGVEIELDVNE 274 >gi|196044355|ref|ZP_03111591.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus 03BB108] gi|196024994|gb|EDX63665.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus 03BB108] Length = 788 Score = 37.1 bits (84), Expect = 2.7, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%) Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263 +DHI+++ ++ I + + SDH PV+ +D+ Sbjct: 741 LDHILVTNNIAPYTSVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784 >gi|118476676|ref|YP_893827.1| endonuclease/exonuclease/phosphatase [Bacillus thuringiensis str. Al Hakam] gi|118415901|gb|ABK84320.1| endonuclease/exonuclease/phosphatase [Bacillus thuringiensis str. Al Hakam] Length = 788 Score = 37.1 bits (84), Expect = 2.7, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%) Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263 +DHI+++ ++ I + + SDH PV+ +D+ Sbjct: 741 LDHILVTNNIAPYTSVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784 >gi|50304665|ref|XP_452288.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140] gi|49641421|emb|CAH01139.1| KLLA0C02057p [Kluyveromyces lactis] Length = 450 Score = 37.1 bits (84), Expect = 2.7, Method: Composition-based stats. Identities = 38/316 (12%), Positives = 82/316 (25%), Gaps = 48/316 (15%) Query: 4 VTVATWNVNSI----RARIHNLAAWIKE-------------------NNPDIICLQETKT 40 + T+N + R R L A + D++ LQE Sbjct: 15 IRFLTFNTWGLKYIARFRKQRLTALAERLAGNLDAGNFWDQNPNDTKEQYDVVALQEVWC 74 Query: 41 EDK---NFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA 97 ++ + Y G S G+AILSK + + A + Sbjct: 75 DEDWNYIVERCKHRYPYYRRFKSGMISGPGLAILSKIPIESTFLYRFPINGRPSAFWRGD 134 Query: 98 TFTINTQTLRI----GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL--------- 144 + + ++ + Y P + ++ + + + Sbjct: 135 WYVGKSISVTLLKRTSPEYPPLAILNSHMHAPYALTGDAAYECHRACQSWDFSKLVKLYK 194 Query: 145 --EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH 202 ++ GD N P I + + A + T+ Sbjct: 195 KAGYSVVVVGDLNSRPGSLPHKFLTIEAGQVDSWEQKFGVQDLKDIAALSPANQITYGGT 254 Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSPE----ATSLLHSARIDTKPRGWTKPSDHTPVI 258 S + + S ++ R+D+ ++ + + SDH Sbjct: 255 TCDSTLNTWRASRGAHEACRLDYALIDSNTLHTLDAKVTFTETIPNI---GSFSDHFAYS 311 Query: 259 VSLDIPEPRKKQQDST 274 + L + + + Q Sbjct: 312 ILLQLKDLTQTDQKPH 327 >gi|303236932|ref|ZP_07323510.1| endonuclease/exonuclease/phosphatase family protein [Prevotella disiens FB035-09AN] gi|302482861|gb|EFL45878.1| endonuclease/exonuclease/phosphatase family protein [Prevotella disiens FB035-09AN] Length = 324 Score = 37.1 bits (84), Expect = 2.7, Method: Composition-based stats. Identities = 10/62 (16%), Positives = 20/62 (32%), Gaps = 21/62 (33%) Query: 223 IDHIMLSPEATSLLHSARIDTKP---------------------RGWTKPSDHTPVIVSL 261 +D +++S + I+ P R SDH P+++ L Sbjct: 263 LDQMLISQHLLPKVKQCSINDAPFLIEEDNKYGGVKPRRFYNGMRYNGGFSDHLPLVLDL 322 Query: 262 DI 263 + Sbjct: 323 SL 324 >gi|218197220|gb|EEC79647.1| hypothetical protein OsI_20882 [Oryza sativa Indica Group] Length = 1784 Score = 37.1 bits (84), Expect = 2.7, Method: Composition-based stats. Identities = 31/264 (11%), Positives = 72/264 (27%), Gaps = 30/264 (11%) Query: 9 WNVNSI-RAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYN 66 WN I A + +L A +E ++ L ET+ + + + Sbjct: 6 WNCRGIGNAATVRDLCALSREAGSQLVFLCETRQSVERMRRLRSRLGLRGFVGENCNGMS 65 Query: 67 GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDD 126 G L + + + + + I T +G P ++ Sbjct: 66 GGLALFWDESVFVEIKGINERYIDAYVRLSVNDPIWHVTFV-------YGEPRVEHRHRM 118 Query: 127 KISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL 186 L L + + + + D T E+ K Sbjct: 119 WSMLNSIKQSSNLPWLVLGDFNETLWQFEHFSKKKRSEVQMQAFRDVLQTYELHDLGFKG 178 Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR 246 Y++ + N +R+D ++ + S++++ Sbjct: 179 L----------------PYTYDNKREG--INNVRVRLDRVVADDGWRDMFRSSQVEHLI- 219 Query: 247 GWTKPSDHTPVIVSLDIPEPRKKQ 270 + S+H PV++ + + + Sbjct: 220 --SPCSNHCPVVLKFCVDTNQPAR 241 >gi|119716549|ref|YP_923514.1| endonuclease/exonuclease/phosphatase [Nocardioides sp. JS614] gi|119537210|gb|ABL81827.1| Endonuclease/exonuclease/phosphatase [Nocardioides sp. JS614] Length = 929 Score = 37.1 bits (84), Expect = 2.7, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 30/77 (38%), Gaps = 21/77 (27%) Query: 223 IDHIMLSPEATSLLHSARI---------------------DTKPRGWTKPSDHTPVIVSL 261 +DH++ SP A +++ I D G + SDH P +V + Sbjct: 765 LDHVLASPAAAAMVTGVDIWNINADESIAFEYSRYNYNATDFYAPGPYRASDHDPEVVGI 824 Query: 262 DIPEPRKKQQDSTSQNM 278 D+P T++++ Sbjct: 825 DLPVIGPVASTVTAEDV 841 >gi|172058551|ref|YP_001815011.1| endonuclease/exonuclease/phosphatase [Exiguobacterium sibiricum 255-15] gi|171991072|gb|ACB61994.1| Endonuclease/exonuclease/phosphatase [Exiguobacterium sibiricum 255-15] Length = 915 Score = 37.1 bits (84), Expect = 2.7, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 25/72 (34%), Gaps = 10/72 (13%) Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS--ARIDTKPRGWTK 250 YS+ Y ++ +DH+++S S I++ Sbjct: 762 WNTVEDLPKSERYSYV-YNGNAQV------LDHVLISKNLKPYTSSDIVNINSDYMEADG 814 Query: 251 -PSDHTPVIVSL 261 SDH P I+S+ Sbjct: 815 SASDHDPAIISI 826 >gi|147803018|emb|CAN63923.1| hypothetical protein VITISV_004023 [Vitis vinifera] Length = 1081 Score = 37.1 bits (84), Expect = 2.7, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 22/57 (38%), Gaps = 11/57 (19%) Query: 211 YADSWSKNKGI------RIDHIMLSPEATSLLHSARIDTKPRGWTKP-SDHTPVIVS 260 +++ G+ R+D ++SP R +P SDH PV++ Sbjct: 583 QGGAFTWTGGLNNMSKARLDRFLVSPCWLDQFSRVS----QRRLPRPISDHFPVLLE 635 >gi|147771570|emb|CAN60473.1| hypothetical protein VITISV_028413 [Vitis vinifera] Length = 1659 Score = 37.1 bits (84), Expect = 2.7, Method: Composition-based stats. Identities = 11/60 (18%), Positives = 23/60 (38%), Gaps = 7/60 (11%) Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 Y++ + + R+D ++S + + T PR SDH P+++ Sbjct: 755 QGGPYTW----SGGLNGQSWSRLDRFLISEDWENHFSGVSQCTLPR---PVSDHXPILLD 807 >gi|300712153|ref|YP_003737967.1| endonuclease/exonuclease/phosphatase family protein [Halalkalicoccus jeotgali B3] gi|299125836|gb|ADJ16175.1| endonuclease/exonuclease/phosphatase family protein [Halalkalicoccus jeotgali B3] Length = 364 Score = 37.1 bits (84), Expect = 2.8, Method: Composition-based stats. Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 9/48 (18%) Query: 223 IDHIMLSPEATSLLHSARI----DTKPRGW----TKPSDHTPVIVSLD 262 ID+++ SP+ + SA + D+ RG SDH V ++ Sbjct: 317 IDYVLPSPDLSVR-DSAAVWPSEDSDERGLLSDVRTASDHRLVWADIE 363 >gi|293568433|ref|ZP_06679753.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecium E1071] gi|291588769|gb|EFF20597.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecium E1071] Length = 277 Score = 37.1 bits (84), Expect = 2.8, Method: Composition-based stats. Identities = 33/285 (11%), Positives = 68/285 (23%), Gaps = 31/285 (10%) Query: 4 VTVATWNVNSIRARI-----HNLAAWIKE---NNPDIICLQETKTEDKNFPFETLQS--L 53 + T N +S + L + + ++I LQE ++ E ++ L Sbjct: 1 MKFMTLNTHS---WLEPEPEKKLQELADKILLEDYEVIALQEI---NQLLESEEVEPAKL 54 Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR---IGN 110 + Q + + + + L + + Sbjct: 55 MKFCQVKNQVPIRKDNFAYRLVQLLKEHGKEYFWSWEMSHIGYDKYEEGNALLTKKTLES 114 Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170 L Y + I + + D + Sbjct: 115 QVLTVSQSQKKEDYQTRKILIGKTKIDDQDIFVSSCHFSWWTDKKSGFYFEWKNLENYFL 174 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADS---------WSKN-KG 220 + + + G+ + Y + + W +N + Sbjct: 175 ETRVPLFFLGDFNNPVDSQGYYTVRESCLLLQDSYVVANEKGKAATVEKKIDGWEQNTEK 234 Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 +RID I + RI SDH V + LD+ E Sbjct: 235 LRIDFIFVPEGMQVK-KYQRIFDGI-DSPIISDHYGVEIELDVNE 277 >gi|297607703|ref|NP_001060456.2| Os07g0645500 [Oryza sativa Japonica Group] gi|255678013|dbj|BAF22370.2| Os07g0645500 [Oryza sativa Japonica Group] Length = 494 Score = 37.1 bits (84), Expect = 2.8, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 26/61 (42%), Gaps = 2/61 (3%) Query: 219 KGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278 G R+D+I+ SP + SDH V V + I + ++ ++S +Q Sbjct: 419 YGTRVDYILASPNSPYKFVPGS--YTVISSKGTSDHHIVKVDVTIQDKKETDEESGNQRQ 476 Query: 279 K 279 + Sbjct: 477 R 477 Score = 36.7 bits (83), Expect = 3.8, Method: Composition-based stats. Identities = 16/96 (16%), Positives = 34/96 (35%), Gaps = 4/96 (4%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDK---NFPFETLQSLNY-HIETCGQKSYNGVAILS 72 R ++ ++E DII LQ + E++ + E + L ++ G A+LS Sbjct: 172 RRRSVEEVLREVGADIIGLQNVRAEEERGMSPLSELAEGLGMRYVFAESWAPEYGNAVLS 231 Query: 73 KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108 ++ + D D + + + Sbjct: 232 RWPIKRWKSQRVADQSDFRLVSSCPRCLEFPGRVAV 267 >gi|116200858|ref|XP_001226241.1| hypothetical protein CHGG_10974 [Chaetomium globosum CBS 148.51] gi|88175688|gb|EAQ83156.1| hypothetical protein CHGG_10974 [Chaetomium globosum CBS 148.51] Length = 1567 Score = 37.1 bits (84), Expect = 2.8, Method: Composition-based stats. Identities = 10/53 (18%), Positives = 17/53 (32%), Gaps = 4/53 (7%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTS 275 ID ++ S E L I SDH + + D + + + Sbjct: 616 IDLVLASAELADQLLRCTIHP----CDHGSDHRAIETAFDTTVEDRPSETRHT 664 >gi|116205393|ref|XP_001228507.1| hypothetical protein CHGG_10580 [Chaetomium globosum CBS 148.51] gi|88176708|gb|EAQ84176.1| hypothetical protein CHGG_10580 [Chaetomium globosum CBS 148.51] Length = 1481 Score = 37.1 bits (84), Expect = 2.8, Method: Composition-based stats. Identities = 10/53 (18%), Positives = 17/53 (32%), Gaps = 4/53 (7%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTS 275 ID ++ S E L I SDH + + D + + + Sbjct: 573 IDLVLASAELADQLLRCTIHP----CDHGSDHRAIETAFDTTVEDRPSETRHT 621 >gi|225429104|ref|XP_002269440.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 656 Score = 37.1 bits (84), Expect = 2.8, Method: Composition-based stats. Identities = 15/166 (9%), Positives = 49/166 (29%), Gaps = 7/166 (4%) Query: 94 FIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGD 153 T+ + +G + + + + + EE G Sbjct: 31 ICWDKRTLEMIEMEVGQFSISCRLRNVEDGFVWTFTGVYGPFSRVDREAFWEELGAIRGI 90 Query: 154 YNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD 213 ++ +N ++ + + + + ++ + + ++S+ + Sbjct: 91 WSDPWCIGGDFNVVLSQRERSSQGRISGAMRRFAQVVDDLELLDLPLQGGVFSW----SG 146 Query: 214 SWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 + R+D +++ I + R SDH P+++ Sbjct: 147 GRNNQAWARLDRFLVTQCWPDNF--CGIV-QCRLPRPTSDHFPIML 189 >gi|54302544|ref|YP_132537.1| hypothetical protein PBPRB0865 [Photobacterium profundum SS9] gi|46915966|emb|CAG22737.1| hypothetical protein PBPRB0865 [Photobacterium profundum SS9] Length = 234 Score = 37.1 bits (84), Expect = 2.8, Method: Composition-based stats. Identities = 32/244 (13%), Positives = 63/244 (25%), Gaps = 22/244 (9%) Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80 + + E N DI LQE + + NY G+ Sbjct: 1 MTSIFSEQNIDIAGLQE--AFNDQIIYLARNLSNYGWVGVGRDDGKTKGEAVPIFYRADK 58 Query: 81 T----HLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136 + + + + + ++ I + R Sbjct: 59 YVKLGGGTFWLSETPEVVASVGWDADLTRITSWVRLEDKESSKRVLVFNAHFDHIGKVAR 118 Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIR 196 S +L ++ GD +D + N + ++ L N + I+ Sbjct: 119 QQSAKLLSKKAKEIIGD------DNDAVIVLGDLNFERSDVASYEALTSLFNDARSTTIK 172 Query: 197 ATHDTHH-LYSFWDYYADSWSKNKGIRIDHIMLSPEAT-SLLHSARIDTKPRGWTKPSDH 254 Y++ Y+ ID+I ++ + + I SDH Sbjct: 173 PFEGIDGKEYTYHGYFKKPTED-----IDYIFVNDKLRVNTFKYVNIIKD---GIYSSDH 224 Query: 255 TPVI 258 VI Sbjct: 225 LSVI 228 >gi|115675789|ref|XP_793350.2| PREDICTED: similar to endonuclease/reverse transcriptase [Strongylocentrotus purpuratus] gi|115942241|ref|XP_001189330.1| PREDICTED: similar to endonuclease/reverse transcriptase [Strongylocentrotus purpuratus] Length = 810 Score = 37.1 bits (84), Expect = 2.9, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 31/70 (44%), Gaps = 3/70 (4%) Query: 4 VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + + N ++++ L I++ +PDIIC E+ E + E NY I Sbjct: 29 LKLLSINCRGLKSKKKQRDLLGAIQQEDPDIICGCESHLEGSYYTSEIF-PRNYDIYRKD 87 Query: 62 QKSYNGVAIL 71 ++ + G + Sbjct: 88 RERHGGGVFI 97 >gi|108864566|gb|ABA94593.2| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 1469 Score = 37.1 bits (84), Expect = 2.9, Method: Composition-based stats. Identities = 18/130 (13%), Positives = 41/130 (31%), Gaps = 13/130 (10%) Query: 157 IPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS 216 + ++ + + + Q F+ R +++ D Sbjct: 541 RHNMWSMLRSLRNSSNLPWLVIGDFNEALWQFEHFSSHPRGEPQMGTPFTY-DNKRQGR- 598 Query: 217 KNKGIRIDHIMLSPEATSLLHSARI--DTKPRGWTKPSDHTPVIVSL--DIPEPRKKQ-- 270 N +R+D + +A + PR SDH P+ + L ++ +P +K+ Sbjct: 599 NNVRVRLDRAIADNAWRDTFPNATLAHLASPR-----SDHCPISLQLSQEMKQPARKKIL 653 Query: 271 QDSTSQNMKP 280 +P Sbjct: 654 HYEICWEREP 663 >gi|315181613|gb|ADT88526.1| Metal-dependent hydrolase [Vibrio furnissii NCTC 11218] Length = 264 Score = 37.1 bits (84), Expect = 2.9, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 17/47 (36%), Gaps = 11/47 (23%) Query: 223 IDHIMLSPEATS------LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 IDHI++SP + S + SDH P+ L Sbjct: 223 IDHIIVSPTLKASDTQQVNFESQDVLRYAL-----SDHCPLRSELQW 264 >gi|225449792|ref|XP_002271720.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 2499 Score = 37.1 bits (84), Expect = 2.9, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 20/45 (44%), Gaps = 4/45 (8%) Query: 217 KNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 N+ R+D + +P +R+ + R SDH PV++ Sbjct: 945 NNQTWARLDRFLATPNWLD--QYSRVL-QRRLPCPTSDHFPVLLE 986 >gi|293557058|ref|ZP_06675618.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecium E1039] gi|291600878|gb|EFF31170.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecium E1039] Length = 277 Score = 37.1 bits (84), Expect = 2.9, Method: Composition-based stats. Identities = 33/285 (11%), Positives = 67/285 (23%), Gaps = 31/285 (10%) Query: 4 VTVATWNVNSIRARI-----HNLAAWIKE---NNPDIICLQETKTEDKNFPFETLQSLN- 54 + T N +S + L + + ++I LQE ++ E ++ Sbjct: 1 MKFMTLNTHS---WLEPEPEKKLQELADKILLEDYEVIALQEI---NQLLESEEVEPAKL 54 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL----RIGN 110 + + + H + I L + + Sbjct: 55 MKFCPVKNQVPIRKDNFAYRLVQLLKEHGKEYFWSWEMSHIGYDKYEEGNALLAKKTLES 114 Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170 L Y + I + + D + Sbjct: 115 QVLTVSQSQKKEDYQTRKILIGKTKIDDQDIFVSSCHFSWWTDKKSGFYFEWKNLENYFL 174 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADS---------WSKN-KG 220 + + + G+ + Y + + W +N + Sbjct: 175 ETRVPLFFLGDFNNPVDSQGYYTVRESCLLLQDSYVVANEKGKAATVEKKIDGWEQNTEK 234 Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 +RID I + RI SDH V + LD+ E Sbjct: 235 LRIDFIFVPEGMQVK-KYQRIFDGI-DSPIISDHYGVEIELDVNE 277 >gi|29290095|gb|AAO67565.1| Pol protein [Drosophila americana] Length = 1517 Score = 37.1 bits (84), Expect = 2.9, Method: Composition-based stats. Identities = 34/269 (12%), Positives = 72/269 (26%), Gaps = 41/269 (15%) Query: 5 TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS----------LN 54 +A WN + + + A++ +N DI+ + E + +++ Sbjct: 63 KMAYWNAAGVSNKCREMEAFMCHHNVDIMMVIELRQRASQSASNSVRGPFANNVSPSIDG 122 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 YH +K+ N G ++ + + Sbjct: 123 YHTYVATRKAPNQRFGGVAILI------RHGIKHIALEPIMQDACQCAPVAITLSTQETI 176 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 PI K + + + I GD+N W + Sbjct: 177 LVAPIYCPPQ-YKWTSENFGKLLSHIDSLSPQGFIICGDWNAK---------STWWGNMR 226 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 R+ + + + + + + + Y N+ ID + Sbjct: 227 HCQRGRELLRTIHSNKKYNILA-----TGGTTHYPYARG----NQPSAIDFAIYGGIGDR 277 Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 L + I SDH P+++ L I Sbjct: 278 RLRTYSI------NDLNSDHLPILIDLAI 300 >gi|289566966|ref|ZP_06447369.1| endonuclease/exonuclease/phosphatase [Enterococcus faecium D344SRF] gi|294613977|ref|ZP_06693909.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecium E1636] gi|289161234|gb|EFD09131.1| endonuclease/exonuclease/phosphatase [Enterococcus faecium D344SRF] gi|291593171|gb|EFF24748.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus faecium E1636] Length = 277 Score = 37.1 bits (84), Expect = 2.9, Method: Composition-based stats. Identities = 33/285 (11%), Positives = 67/285 (23%), Gaps = 31/285 (10%) Query: 4 VTVATWNVNSIRARI-----HNLAAWIKE---NNPDIICLQETKTEDKNFPFETLQSLN- 54 + T N +S + L + + ++I LQE ++ E ++ Sbjct: 1 MKFMTLNTHS---WLEPEPEKKLQELADKILLEDYEVIALQEI---NQLLESEEVEPAKL 54 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL----RIGN 110 + + + H + I L + + Sbjct: 55 MKFCPVKNQVPIRKDNFAYRLVQLLKEHGKEYFWSWEMSHIGYDKYEEGNALLTKKTLES 114 Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170 L Y + I + + D + Sbjct: 115 QVLTVSQSQKKEDYQTRKILIGKTKIDDQDIFVSSCHFSWWTDKKSGFYFEWKNLENYFL 174 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADS---------WSKN-KG 220 + + + G+ + Y + + W +N + Sbjct: 175 ETRVPLFFLGDFNNPVDSQGYYTVRESCLLLQDSYVVANEKGKAATVEKKIDGWEQNTEK 234 Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 +RID I + RI SDH V + LD+ E Sbjct: 235 LRIDFIFVPEGMQVK-KYQRIFDGI-DSPIISDHYGVEIELDVNE 277 >gi|322712256|gb|EFZ03829.1| reverse transcriptase, putative [Metarhizium anisopliae ARSEF 23] Length = 1111 Score = 37.1 bits (84), Expect = 3.0, Method: Composition-based stats. Identities = 13/61 (21%), Positives = 23/61 (37%), Gaps = 5/61 (8%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV--IVSLDIPEPRKKQQDSTSQNMKP 280 ID + + T + +ID G SDH P+ + + ++ S+ P Sbjct: 45 IDLTFATEDLTRHVTHCKIDG---GLDCDSDHLPIDTALDWEWKAATVTRKRLWSKTKIP 101 Query: 281 I 281 I Sbjct: 102 I 102 >gi|330924640|ref|XP_003300719.1| hypothetical protein PTT_12052 [Pyrenophora teres f. teres 0-1] gi|311325004|gb|EFQ91187.1| hypothetical protein PTT_12052 [Pyrenophora teres f. teres 0-1] Length = 617 Score = 37.1 bits (84), Expect = 3.0, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 22/45 (48%), Gaps = 4/45 (8%) Query: 223 IDHIMLSPEATSLLHSAR----IDTKPRGWTKPSDHTPVIVSLDI 263 +DH+ +SP +A ++T P + SDH P + L++ Sbjct: 571 LDHMYVSPSLAKKSKAAYEHIHVNTWPEFAAQVSDHDPSVAKLNV 615 >gi|209881847|ref|XP_002142361.1| endonuclease/exonuclease/phosphatase family protein [Cryptosporidium muris RN66] gi|209557967|gb|EEA08012.1| endonuclease/exonuclease/phosphatase family protein [Cryptosporidium muris RN66] Length = 675 Score = 37.1 bits (84), Expect = 3.0, Method: Composition-based stats. Identities = 17/142 (11%), Positives = 35/142 (24%), Gaps = 1/142 (0%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDK-NFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75 R + + + + DI+CLQE ++ F L NY+ + G + Sbjct: 335 RRSLIIQELIDLDADILCLQEVQSSTFVQFYQPILAYYNYNGCIAERDKEKGGVATFMKK 394 Query: 76 PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135 + + + + + N T ++ S Sbjct: 395 DKFNIINSHCIHFNSRFIENYPDLVEKISIMWPQFFTNLFYNISTVYQFTIAESIYGSMY 454 Query: 136 RFASQRLELEEPLIFAGDYNII 157 + L I Sbjct: 455 LVINTHLFYHPNGGHVRILQIK 476 >gi|189198097|ref|XP_001935386.1| endonuclease/exonuclease/phosphatase family protein [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187981334|gb|EDU47960.1| endonuclease/exonuclease/phosphatase family protein [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 607 Score = 37.1 bits (84), Expect = 3.0, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 22/45 (48%), Gaps = 4/45 (8%) Query: 223 IDHIMLSPEATSLLHSAR----IDTKPRGWTKPSDHTPVIVSLDI 263 +DH+ +SP +A ++T P + SDH P + L++ Sbjct: 561 LDHMYVSPSLAKKSKAAYEHIHVNTWPEFAAQVSDHDPSVAKLNV 605 >gi|124360675|gb|ABN08664.1| reverse transcriptase - beet retrotransposon, putative [Medicago truncatula] Length = 324 Score = 37.1 bits (84), Expect = 3.0, Method: Composition-based stats. Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 3/41 (7%) Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 R+D I+LS T+L + PRG DH P+++++D Sbjct: 3 RLDRILLSESWTALFPNCIQVALPRGLL---DHCPILLTID 40 >gi|146100536|ref|XP_001468887.1| hypothetical protein [Leishmania infantum] gi|134073256|emb|CAM71979.1| conserved hypothetical protein [Leishmania infantum JPCM5] Length = 531 Score = 37.1 bits (84), Expect = 3.1, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 27/68 (39%), Gaps = 8/68 (11%) Query: 3 VVTVATWNV-NSIRARIHNLAAWIKENNPDIICLQET-----KTEDKNFPFETLQSLNYH 56 V WN+ ++ + + A +K + D I LQE ++ N P E ++L Sbjct: 42 TFRVVQWNIERGVK--LDAIIADLKALHADFIVLQELDINCRRSNYANVPKEIAKALEAE 99 Query: 57 IETCGQKS 64 + + Sbjct: 100 LYFACEFQ 107 >gi|294646774|ref|ZP_06724397.1| conserved domain protein [Bacteroides ovatus SD CC 2a] gi|292637934|gb|EFF56329.1| conserved domain protein [Bacteroides ovatus SD CC 2a] Length = 201 Score = 37.1 bits (84), Expect = 3.1, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 10/79 (12%) Query: 3 VVTVATWNVNSIR------ARIHNLAAWIKENNPDIICLQETKTEDK---NFPFETLQSL 53 V+TVAT+NV++ + +A++++ DI+C QE D+ + L + Sbjct: 109 VLTVATYNVDAFNHEHTGYSC-KEIASYMRNLQADILCFQEFGINDEFGIDSISAALSNW 167 Query: 54 NYHIETCGQKSYNGVAILS 72 YH + VA Sbjct: 168 PYHYIPSSPEGKKSVATGC 186 >gi|255068805|emb|CBA11992.1| endonuclease-reverse transcriptase HmRTE-e01 [Heliconius melpomene] Length = 990 Score = 37.1 bits (84), Expect = 3.1, Method: Composition-based stats. Identities = 12/36 (33%), Positives = 17/36 (47%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETK 39 + ATWN+ S+ R LA + LQET+ Sbjct: 51 LRFATWNIGSLTGRCRELADVLMRRRVQCAFLQETR 86 >gi|46906561|ref|YP_012950.1| endonuclease/exonuclease/phosphatase family protein [Listeria monocytogenes str. 4b F2365] gi|47091460|ref|ZP_00229257.1| endonuclease/exonuclease/phosphatase family protein [Listeria monocytogenes str. 4b H7858] gi|46879826|gb|AAT03127.1| endonuclease/exonuclease/phosphatase family protein [Listeria monocytogenes serotype 4b str. F2365] gi|47020137|gb|EAL10873.1| endonuclease/exonuclease/phosphatase family protein [Listeria monocytogenes str. 4b H7858] gi|328467778|gb|EGF38824.1| endonuclease/exonuclease/phosphatase family protein [Listeria monocytogenes 1816] Length = 257 Score = 37.1 bits (84), Expect = 3.1, Method: Composition-based stats. Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 2/37 (5%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 ID+I +S E + S T SDH PV+ Sbjct: 218 IDYIFVSNEF--HICSYETSTDEIDGCSASDHFPVMA 252 >gi|325914373|ref|ZP_08176720.1| putative extracellular nuclease [Xanthomonas vesicatoria ATCC 35937] gi|325539381|gb|EGD11030.1| putative extracellular nuclease [Xanthomonas vesicatoria ATCC 35937] Length = 572 Score = 37.1 bits (84), Expect = 3.1, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 22/56 (39%), Gaps = 14/56 (25%) Query: 222 RIDHIMLSPEATSLLHSAR---IDTKPR-----------GWTKPSDHTPVIVSLDI 263 R+DH +LSP L A ++ G + SDH PV++ + Sbjct: 517 RLDHALLSPAMAKQLRGAVEWHVNADAMDDAGYAKRNLPGPWRSSDHDPVLLGFSL 572 >gi|256391129|ref|YP_003112693.1| endonuclease/exonuclease/phosphatase [Catenulispora acidiphila DSM 44928] gi|256357355|gb|ACU70852.1| Endonuclease/exonuclease/phosphatase [Catenulispora acidiphila DSM 44928] Length = 802 Score = 37.1 bits (84), Expect = 3.1, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 25/63 (39%), Gaps = 8/63 (12%) Query: 200 DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 T+ Y++ DY S +DHI++S L + + SDH P +V Sbjct: 747 PTNEQYTY-DYEGVSEV------LDHILVSKGIKD-LSYQVVHVNAEYTDQASDHDPQVV 798 Query: 260 SLD 262 + Sbjct: 799 RIK 801 >gi|297194844|ref|ZP_06912242.1| endonuclease/exonuclease/phosphatase [Streptomyces pristinaespiralis ATCC 25486] gi|197720692|gb|EDY64600.1| endonuclease/exonuclease/phosphatase [Streptomyces pristinaespiralis ATCC 25486] Length = 247 Score = 37.1 bits (84), Expect = 3.1, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 19/45 (42%), Gaps = 3/45 (6%) Query: 222 RIDHIMLSPEATSLLHSARI-DTKPRGWTKPSDHTPVIVSLDIPE 265 RID + + + + D P SDH PV+ +L IP Sbjct: 203 RIDAVFATEGVE--VLGCGVPDLPPADLRAASDHLPVLAALRIPA 245 >gi|94501571|ref|ZP_01308088.1| hypothetical protein RED65_08314 [Oceanobacter sp. RED65] gi|94426254|gb|EAT11245.1| hypothetical protein RED65_08314 [Oceanobacter sp. RED65] Length = 275 Score = 37.1 bits (84), Expect = 3.1, Method: Composition-based stats. Identities = 9/43 (20%), Positives = 19/43 (44%), Gaps = 7/43 (16%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 +DHI++S + + SDH P+ + + +P+ Sbjct: 235 LDHILVSEGV--QVKRLAVLDVA-----VSDHLPIAMEIALPD 270 >gi|329963123|ref|ZP_08300903.1| oxidoreductase, NAD-binding domain protein [Bacteroides fluxus YIT 12057] gi|328529164|gb|EGF56094.1| oxidoreductase, NAD-binding domain protein [Bacteroides fluxus YIT 12057] Length = 515 Score = 37.1 bits (84), Expect = 3.1, Method: Composition-based stats. Identities = 19/135 (14%), Positives = 37/135 (27%), Gaps = 9/135 (6%) Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + + + + L D I + + +I EN E+ Sbjct: 145 DWLHHFPVAKCALENGKHVAIEVPSAMNLQECWDL-INLSEANRKHCMILENCCYDWFEM 203 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDY-YADSWSKNKGIRIDH-------IMLSPE 231 Q + H+L FWDY + + G R+D+ + + Sbjct: 204 NTLNMAQQGVFGEVIRAQGAYIHNLEPFWDYYWKNGEGDKLGWRLDYNMKHRGDVYATHG 263 Query: 232 ATSLLHSARIDTKPR 246 + + I R Sbjct: 264 LGPVAQALDIHRGDR 278 >gi|330934643|ref|XP_003304635.1| hypothetical protein PTT_17284 [Pyrenophora teres f. teres 0-1] gi|311318650|gb|EFQ87267.1| hypothetical protein PTT_17284 [Pyrenophora teres f. teres 0-1] Length = 257 Score = 37.1 bits (84), Expect = 3.1, Method: Composition-based stats. Identities = 32/259 (12%), Positives = 71/259 (27%), Gaps = 32/259 (12%) Query: 30 PDIICLQETKTEDKNFPFETLQSL---NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGD 86 D++ LQE + + N++ ++ +S ++ G Sbjct: 14 ADVVFLQEV--SKEGLAALIEEPWIQQNWYTSDANASAFGNQKFISITLVSKLWVATDGI 71 Query: 87 DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEE 146 L R + L + + ++ + + L + Sbjct: 72 LLGAIWRISLPSRFGRDALCCDLILNSSSKHTSGRSSLRIRLINVHLDSLPINPSLRPYQ 131 Query: 147 PLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYS 206 I A + + + F + + ++ DA H + Y+ Sbjct: 132 LFISASYLSAVGRGIIA---------GDFNPVLPEDDDLVRTNDLIDAWAHLHPNNPGYT 182 Query: 207 FWDYYADSWSKNKGIRID---HIMLSPEATSLLHSARI----------DTKPRGWTKPSD 253 + Y S+ N R+D L+P +L ++ + + SD Sbjct: 183 WGVYGEQSFPPN---RLDKVALFNLTPSGMGILQTSELGFCGEKTSAGLKESFSKAHFSD 239 Query: 254 HTPVIVSLDIPEPRKKQQD 272 H + DI + Q Sbjct: 240 HLGLWC--DIGWVEDRPQP 256 >gi|322502896|emb|CBZ37978.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 531 Score = 37.1 bits (84), Expect = 3.2, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 27/68 (39%), Gaps = 8/68 (11%) Query: 3 VVTVATWNV-NSIRARIHNLAAWIKENNPDIICLQET-----KTEDKNFPFETLQSLNYH 56 V WN+ ++ + + A +K + D I LQE ++ N P E ++L Sbjct: 42 TFRVVQWNIERGVK--LDAIIADLKALHADFIVLQELDINCRRSNYANVPKEIAKALEAE 99 Query: 57 IETCGQKS 64 + + Sbjct: 100 LYFACEFQ 107 >gi|164662056|ref|XP_001732150.1| hypothetical protein MGL_0743 [Malassezia globosa CBS 7966] gi|159106052|gb|EDP44936.1| hypothetical protein MGL_0743 [Malassezia globosa CBS 7966] Length = 1201 Score = 37.1 bits (84), Expect = 3.2, Method: Composition-based stats. Identities = 10/147 (6%), Positives = 26/147 (17%), Gaps = 9/147 (6%) Query: 76 PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135 +++ + G + Q + + D + + Sbjct: 571 WLKVWQWMQGPKMPKQHIIKHYPWWPWQHLEAAWLRWTAPLAWKPPASSDLPLWGSEEAP 630 Query: 136 RFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAI 195 + + P W R + Sbjct: 631 SIELEPTNHMHTIPT-----PPPAKQGGTPGQRWWAKIEC-DWQRNWLHWIILCAVCIGW 684 Query: 196 RATHDTHHLYSFWDYYADSWSKNKGIR 222 Y+++ N+G R Sbjct: 685 LFCFSVMVHYTWFSARIL---TNEGWR 708 >gi|254932552|ref|ZP_05265911.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes HPB2262] gi|293584109|gb|EFF96141.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes HPB2262] gi|328476050|gb|EGF46765.1| endonuclease/exonuclease/phosphatase family protein [Listeria monocytogenes 220] Length = 257 Score = 37.1 bits (84), Expect = 3.2, Method: Composition-based stats. Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 2/37 (5%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 ID+I +S E + S T SDH PV+ Sbjct: 218 IDYIFVSNEF--HICSYETSTDEIDGCSASDHFPVMA 252 >gi|146307309|ref|YP_001187774.1| endonuclease/exonuclease/phosphatase [Pseudomonas mendocina ymp] gi|145575510|gb|ABP85042.1| Endonuclease/exonuclease/phosphatase [Pseudomonas mendocina ymp] Length = 262 Score = 37.1 bits (84), Expect = 3.2, Method: Composition-based stats. Identities = 27/252 (10%), Positives = 61/252 (24%), Gaps = 30/252 (11%) Query: 15 RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKY 74 R + L + ++ D++ LQE + Q S + Sbjct: 38 RFILPELRSAVQATGADLVFLQEV-LGSHAMHAKRFQDW-------PSVPQYEFLADSMW 89 Query: 75 QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRF 134 + D + + L + + + + Sbjct: 90 PQFAYGRNAVYPAGDHGNALLSRFPILEYHNLDVTVSGTEQRGLLHCRLDVPGHAEVHAI 149 Query: 135 LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDA 194 R + + + F +++ +L T+ Sbjct: 150 CVHLGLRERHRRQQLGLLLDLLATLAPAAPVIVA----GDFNDWRQRADDQLAPHALTEV 205 Query: 195 IRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPE--ATSLLHSARIDTKPRGWTKP 251 + H A S+ + +R+D I + + S R W+ Sbjct: 206 FKHHHGKP---------ARSFPARCPLLRLDRIYVRNATALKPQVLST------RPWSHL 250 Query: 252 SDHTPVIVSLDI 263 SDH P+ + + Sbjct: 251 SDHAPLAAEIHL 262 >gi|6323517|ref|NP_013588.1| Ngl3p [Saccharomyces cerevisiae S288c] gi|2497064|sp|Q03210|NGL3_YEAST RecName: Full=Probable RNA exonuclease NGL3 gi|151946045|gb|EDN64276.1| conserved protein [Saccharomyces cerevisiae YJM789] gi|285813885|tpg|DAA09780.1| TPA: Ngl3p [Saccharomyces cerevisiae S288c] Length = 505 Score = 37.1 bits (84), Expect = 3.2, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 20/47 (42%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 R L +K+ PD++ LQE + NF E L + + + Sbjct: 139 RSKVLVHELKKYRPDVVSLQEVDYNELNFWQENFHKLGFDVIFKRHE 185 >gi|307109204|gb|EFN57442.1| hypothetical protein CHLNCDRAFT_50978 [Chlorella variabilis] Length = 226 Score = 37.1 bits (84), Expect = 3.2, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 26/65 (40%), Gaps = 8/65 (12%) Query: 13 SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPF--ETLQSLNYHIETCGQKSYNGVAI 70 S R+R+ + I ++PDI+CLQE FP LQ Y + + Sbjct: 96 SFRSRL--IIREILHHSPDIVCLQEV----DRFPEFQHALQPHGYEGVFTKRTGDRSDGL 149 Query: 71 LSKYQ 75 ++ Sbjct: 150 AMFWR 154 >gi|288574157|ref|ZP_06392514.1| Endonuclease/exonuclease/phosphatase [Dethiosulfovibrio peptidovorans DSM 11002] gi|288569898|gb|EFC91455.1| Endonuclease/exonuclease/phosphatase [Dethiosulfovibrio peptidovorans DSM 11002] Length = 242 Score = 37.1 bits (84), Expect = 3.2, Method: Composition-based stats. Identities = 31/281 (11%), Positives = 67/281 (23%), Gaps = 60/281 (21%) Query: 4 VTVATWNV------------------NSIRA--RIHNLAAWIKENNPDIICLQETKTEDK 43 + + +NV N R+ R + ++ +PDII L E Sbjct: 1 MRLILYNVRYGTGTGLSYHVPAPFSGNFRRSTGRFKRITDYLMNLSPDIIGLVEV----- 55 Query: 44 NFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 + ++ + + + + L V Sbjct: 56 --------DGGSYRHGGNCQAETAASSMGGHHRFAVKYSERISRLPVLRS-QGNAIVSRL 106 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 ++ L G + + + R + + +P Sbjct: 107 PPIKTDCHDLGRGMKRNALEVAYGDFSLILVHLSLGSRSRRHQIRALRDLCSARERPLIL 166 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223 + E ++ + T+ + + + Sbjct: 167 AGDY----NTLSGPEELAPLRETGMASVNELGLPTYPCR------------RPRKE---L 207 Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 D +++S E I R SDH P+I L+I Sbjct: 208 DFVLISEEI--STKGFFI-PDVR----FSDHLPLICDLEIS 241 >gi|322832105|ref|YP_004212132.1| Endonuclease/exonuclease/phosphatase [Rahnella sp. Y9602] gi|321167306|gb|ADW73005.1| Endonuclease/exonuclease/phosphatase [Rahnella sp. Y9602] Length = 370 Score = 37.1 bits (84), Expect = 3.2, Method: Composition-based stats. Identities = 41/272 (15%), Positives = 70/272 (25%), Gaps = 40/272 (14%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 S + + NV + L A ++ PDI+ L ET Sbjct: 101 SRIKIMNSNVLTTNREPEKLLAQVRHYQPDILVLLET----DQ------------WWEDQ 144 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 + S P+E + + + LP G + Sbjct: 145 MAELDADYPHSLRCPLENLYGMHVYSRLPMQAAKIQYLVADDIPSMHFRAELPSGEQVIL 204 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 S+ EL A N + W +++ Sbjct: 205 HCLHPMPPSPTEADESTSRDGELVAVGHTAAKARYPTIVTGDLNDVAWSRTTRLFMKISG 264 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 + G + A++ +DH+ S + T I Sbjct: 265 LLDPRRGRGMYNTFHASYPFLR-----------------WPLDHVFHSKDFT------LI 301 Query: 242 DTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDS 273 D K R SDH P++V L + + Q+S Sbjct: 302 DLK-RLDFMGSDHFPILVELALTPSQGIDQES 332 >gi|271967547|ref|YP_003341743.1| metal-dependent hydrolase-like protein [Streptosporangium roseum DSM 43021] gi|270510722|gb|ACZ89000.1| Metal-dependent hydrolase-like protein [Streptosporangium roseum DSM 43021] Length = 617 Score = 37.1 bits (84), Expect = 3.2, Method: Composition-based stats. Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 7/39 (17%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 IDH++++P T A +D SDH P+ V+L Sbjct: 582 IDHVLVTPGFTGR-DQANVD------VPHSDHRPIAVTL 613 >gi|147768250|emb|CAN73611.1| hypothetical protein VITISV_023626 [Vitis vinifera] Length = 293 Score = 37.1 bits (84), Expect = 3.2, Method: Composition-based stats. Identities = 7/19 (36%), Positives = 14/19 (73%) Query: 21 LAAWIKENNPDIICLQETK 39 + +++ NPD++ +QETK Sbjct: 89 VKDFLRLENPDVVMIQETK 107 >gi|281344662|gb|EFB20246.1| hypothetical protein PANDA_012098 [Ailuropoda melanoleuca] Length = 126 Score = 37.1 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 38/110 (34%), Gaps = 12/110 (10%) Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231 E R L M F D RA H Y+F+ ++S R DHI+ Sbjct: 14 KQKINKETRALNDTLDKMDFIDIFRAFHPEAIEYTFFSSAHGTFS-----RTDHILGHES 68 Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 + I DH+ + L + RK +++ + +K I Sbjct: 69 GLNWYQKIGIILCIFL-----DHSA--LKLKLSHKRKFGRNTNTWRLKSI 111 >gi|281421494|ref|ZP_06252493.1| endonuclease/Exonuclease/phosphatase family protein [Prevotella copri DSM 18205] gi|281404566|gb|EFB35246.1| endonuclease/Exonuclease/phosphatase family protein [Prevotella copri DSM 18205] Length = 335 Score = 37.1 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 24/65 (36%), Gaps = 22/65 (33%) Query: 221 IR-IDHIMLSPEATSLLHSARI--------DTKPRGWTKP-------------SDHTPVI 258 R +D I+ SP + L S +I D + G KP SDH P++ Sbjct: 266 WRSLDQILFSPSLSRLKMSCQIGDLPFLLEDDEKYGGKKPFRTYLGPRYLGGYSDHLPLV 325 Query: 259 VSLDI 263 I Sbjct: 326 AKFKI 330 >gi|147844291|emb|CAN80038.1| hypothetical protein VITISV_040550 [Vitis vinifera] Length = 869 Score = 37.1 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 9/40 (22%), Positives = 21/40 (52%), Gaps = 2/40 (5%) Query: 4 VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTE 41 + + + NV I + + + I ++ +++C QETK + Sbjct: 637 LRILSLNVRGINKGDKRKAIKSLICSHSANLVCRQETKVQ 676 >gi|50548277|ref|XP_501608.1| YALI0C08657p [Yarrowia lipolytica] gi|49647475|emb|CAG81911.1| YALI0C08657p [Yarrowia lipolytica] Length = 455 Score = 37.1 bits (84), Expect = 3.3, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 31/78 (39%), Gaps = 20/78 (25%) Query: 199 HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT-------------KP 245 H +S W A +W +G+ +D+I +S + + + +P Sbjct: 384 HKKEPRFSNW---AHAW---RGL-LDYIFVSSNNSDEVQVKSLLKMPLEEDMGPEPSGQP 436 Query: 246 RGWTKPSDHTPVIVSLDI 263 R PSDH ++ +++ Sbjct: 437 RIDMYPSDHLAIMAEVEL 454 >gi|147765313|emb|CAN66945.1| hypothetical protein VITISV_020092 [Vitis vinifera] Length = 894 Score = 36.7 bits (83), Expect = 3.3, Method: Composition-based stats. Identities = 10/61 (16%), Positives = 21/61 (34%), Gaps = 9/61 (14%) Query: 201 THHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 ++++ N+ R+D +++ S + R SDH PV + Sbjct: 163 QGGVFTW-----SGGPNNQSWARLDRFLVNTSWLDQFSSVL---QSRLPRPLSDHFPVSL 214 Query: 260 S 260 Sbjct: 215 E 215 >gi|260771675|ref|ZP_05880594.1| exodeoxyribonuclease III [Vibrio metschnikovii CIP 69.14] gi|260613259|gb|EEX38459.1| exodeoxyribonuclease III [Vibrio metschnikovii CIP 69.14] Length = 265 Score = 36.7 bits (83), Expect = 3.4, Method: Composition-based stats. Identities = 27/254 (10%), Positives = 66/254 (25%), Gaps = 28/254 (11%) Query: 25 IKENNPDIICLQETK------TEDKNFPFE---TLQSLNYHIETCGQKSYNGVAILSKYQ 75 I E D++ LQE D N + Y ++ + + + Sbjct: 24 IIEQGCDVVALQEVNQHQNSPAVDSNILTNHTVLADNYGYLLQKKLMEYGYHYQLTWDFV 83 Query: 76 PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135 + G + +E + + I T + Sbjct: 84 HQSYDVYQEGLAFLTRLPIVEHEVIDLSDNYDVNFWKHRRAVRIKVTSQRGDFNLYNCHC 143 Query: 136 RFASQ------RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNM 189 + S + + + + + + I E ++ + Sbjct: 144 GWWSDSESSFEDQFNRIKATLSTELSFLLGDFNNPSHIRNEGYDYVLQCGLIDCYEIAEI 203 Query: 190 GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT 249 + + W+ + + +RID ++ + + ++ + Sbjct: 204 KDSGTTVIKNIDG-----WEQNSQA------LRIDLVLSNQPMV--VKQHQVIFNNDFYP 250 Query: 250 KPSDHTPVIVSLDI 263 SDH V+V +DI Sbjct: 251 VVSDHFGVLVEVDI 264 >gi|226222950|ref|YP_002757057.1| hypothetical protein Lm4b_00342 [Listeria monocytogenes Clip81459] gi|225875412|emb|CAS04109.1| Hypothetical protein of unknown function [Listeria monocytogenes serotype 4b str. CLIP 80459] Length = 257 Score = 36.7 bits (83), Expect = 3.4, Method: Composition-based stats. Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 2/37 (5%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 ID+I +S E + S T SDH PV+ Sbjct: 218 IDYIFVSNEF--HICSYETSTDEIDGCSASDHFPVMA 252 >gi|514357|gb|AAA72722.1| invplved in the development of the embryonic central nervous system [Drosophila melanogaster] Length = 530 Score = 36.7 bits (83), Expect = 3.4, Method: Composition-based stats. Identities = 12/160 (7%), Positives = 37/160 (23%), Gaps = 2/160 (1%) Query: 34 CLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR 93 CL E K ++ + ++S + + I + Sbjct: 109 CLGEIKCQNNATCIDGVESYKCECQPGFSGEFCDTKIQFCSPEFNPCANGAKCMDHFTHY 168 Query: 94 FIEATFTINTQTLR--IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFA 151 + + I + + + + + E + Sbjct: 169 SCDCQAGFHGTNCTDNIDDCQNHMCQNGGTCVDGINDYQCRCPDDYTGKYCEGHNMISMM 228 Query: 152 GDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191 Q H+C + + ++ +A + + + Sbjct: 229 YPQTSPCQNHECKHGVCFQPNAQGSDYLCRCHPGYTGKWC 268 >gi|332172322|gb|AEE21576.1| Endonuclease/exonuclease/phosphatase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 391 Score = 36.7 bits (83), Expect = 3.4, Method: Composition-based stats. Identities = 11/52 (21%), Positives = 19/52 (36%), Gaps = 10/52 (19%) Query: 221 IRIDHIMLSPEATSLLHSARI---------DTKPRGWTKPSDHTPVIVSLDI 263 +R D+++ S + + + R SDH V V +DI Sbjct: 339 MRADYVIPSKALGE-VTDSGVFWPTPQDPLHRLIRDRQASSDHRLVWVDVDI 389 >gi|302814903|ref|XP_002989134.1| hypothetical protein SELMODRAFT_427751 [Selaginella moellendorffii] gi|300143034|gb|EFJ09728.1| hypothetical protein SELMODRAFT_427751 [Selaginella moellendorffii] Length = 1303 Score = 36.7 bits (83), Expect = 3.4, Method: Composition-based stats. Identities = 32/260 (12%), Positives = 67/260 (25%), Gaps = 32/260 (12%) Query: 45 FPFET-LQSLN-YHIETCGQ-----KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA 97 PF L+ + YH + N + S + + V Sbjct: 967 IPFAWPLRPMGPYHWVERQRLGSARGFRNEHRLSSMDLVYKFTKGKYFWNPAVSCSGGTL 1026 Query: 98 TFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII 157 + + ++ + +A E + + I Sbjct: 1027 IVVKGQWESLVEEHAILVPGRAQCVQFKIGDMLVGLLNVYAPAGSSSERADFWNELVHRI 1086 Query: 158 PQPHDCYNPIIWEN--------------DACFTLEVRQSFQKLQNMGFTDAIRATH--DT 201 P + N D + E Q + +G D Sbjct: 1087 PAQPSTWMVTGDFNFVEEVLDKDGGEMRDKRTSRERAMWAQLVLALGLEDTYNIPGFVQH 1146 Query: 202 HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +++ ++ + R+D +SPE ++ G+ SDH V ++L Sbjct: 1147 QPRFTWQEHQQRGIQR----RLDRFYVSPEL---CRNSGKLDITTGYRDFSDHNSVSLTL 1199 Query: 262 DI--PEPRKKQQDSTSQNMK 279 I K+ + +N + Sbjct: 1200 PILKRWGTKRPAPVSRKNFE 1219 >gi|300123561|emb|CBK24833.2| unnamed protein product [Blastocystis hominis] Length = 491 Score = 36.7 bits (83), Expect = 3.4, Method: Composition-based stats. Identities = 46/316 (14%), Positives = 90/316 (28%), Gaps = 66/316 (20%) Query: 1 MSV---VTVATWN----------VNSIR------ARIHNLAAWIKENNPDIICLQETKTE 41 MS+ + + ++N + R R+ +AA ++ +PDII LQE + + Sbjct: 180 MSLHPRLRIVSYNAWNTMPASWFITGERRFDWFYKRMQLMAANLRAADPDIIVLQEIRYD 239 Query: 42 D---KN---FPFETLQSL--NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR 93 + F L L +Y YN + + + +++ P D Sbjct: 240 ETLGDQRRRFQLRHLTELLPDYQYIFQPANMYNEHGSRVE-EGVAVLSKFPIRRQDYILL 298 Query: 94 FIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGD 153 + T + + + + + T Y +S + + L A + Sbjct: 299 SRDYTDKQDDHQRLVLHAQIAVPSIGTIHVYGTHLSLSEAARDRTVRELSDFIDWNGANE 358 Query: 154 YNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD 213 +++ + E+ ++ H S Sbjct: 359 FSVFCGDLNAEPDSAAIRYLIGKGELGGKRTNYKDA-----FLQVHPEPKPRS---PSEG 410 Query: 214 SWSK-------NKGIRIDHIML---------------------SPEATSLLHSARIDTKP 245 + +K N RID+I+ S T L + + Sbjct: 411 ARAKALTFPTDNPVKRIDYIIYKQGSGVHVRVDDSQLIGLKPWSGTETDDLKAGMMSKDS 470 Query: 246 RGWTKPSDHTPVIVSL 261 W PSDH V Sbjct: 471 ALW--PSDHRGVYADF 484 >gi|50414810|ref|XP_457434.1| DEHA2B11044p [Debaryomyces hansenii CBS767] gi|49653099|emb|CAG85438.1| DEHA2B11044p [Debaryomyces hansenii] Length = 306 Score = 36.7 bits (83), Expect = 3.4, Method: Composition-based stats. Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 ID I + ++ ID + G SDH PV ++ Sbjct: 268 IDFIWTTKG-VPIVKHEIIDHECNGS-YCSDHRPVTAIFEV 306 >gi|32483159|emb|CAE02147.1| OSJNBa0081G05.2 [Oryza sativa Japonica Group] gi|116309213|emb|CAH66305.1| OSIGBa0135K14.2 [Oryza sativa Indica Group] gi|116309230|emb|CAH66320.1| OSIGBa0150M16.3 [Oryza sativa Indica Group] Length = 1711 Score = 36.7 bits (83), Expect = 3.4, Method: Composition-based stats. Identities = 21/190 (11%), Positives = 54/190 (28%), Gaps = 11/190 (5%) Query: 97 ATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI 156 + ++ N S+ R + L + Sbjct: 618 YWDESVSVDVKDINKRYIDAYVRLSSDEPQWHITFVYGEPRVENRHRMWSLLRTIRQSSA 677 Query: 157 IPQPH--DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADS 214 +P D + Q ++ + ++ +++ D D Sbjct: 678 LPWMVIGDFNETLWQFEHFSKNPRCETQMQNFRDALYDCDLQDLGFKGVPHTY-DNRRDG 736 Query: 215 WSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDST 274 W +N +R+D + + L A++ + SDH+P+++ + + + +Q Sbjct: 737 W-RNVKVRLDRAVADDKWRDLFPEAQVSHLV---SPCSDHSPILLEFIVKDTTRPRQKCL 792 Query: 275 S----QNMKP 280 +P Sbjct: 793 HYEIVWEREP 802 >gi|115803163|ref|XP_783572.2| PREDICTED: similar to reverse transcriptase-like protein [Strongylocentrotus purpuratus] gi|115958751|ref|XP_001196705.1| PREDICTED: similar to reverse transcriptase-like protein [Strongylocentrotus purpuratus] Length = 1028 Score = 36.7 bits (83), Expect = 3.4, Method: Composition-based stats. Identities = 14/114 (12%), Positives = 39/114 (34%), Gaps = 9/114 (7%) Query: 5 TVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQ-------SLNY 55 A WN SI+A+ + ++ +++ D++ L ET + + + ++ Sbjct: 133 RFALWNARSIKAKGKATTVCDYVIQDHIDVLALTETWLTNTDRDHHAIATIRKTLVKYDF 192 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109 H + GV ++ + + + T + + + + Sbjct: 193 HHIPQATSTGGGVGVILHKAFDVVFHDRHAFSSFEYSDLTIHSSTKHLRLVTVY 246 >gi|294508721|ref|YP_003572780.1| Endonuclease/exonuclease/phosphatase family protein [Salinibacter ruber M8] gi|294345050|emb|CBH25828.1| Endonuclease/exonuclease/phosphatase family protein [Salinibacter ruber M8] Length = 358 Score = 36.7 bits (83), Expect = 3.4, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 18/46 (39%), Gaps = 3/46 (6%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268 IDHI+ SP+ + PSDH V +L + + Sbjct: 300 IDHILYSPQFFEAV---DTKRWCGRPAPPSDHCAVTAALRLTSRAE 342 >gi|218194668|gb|EEC77095.1| hypothetical protein OsI_15508 [Oryza sativa Indica Group] Length = 1296 Score = 36.7 bits (83), Expect = 3.4, Method: Composition-based stats. Identities = 28/223 (12%), Positives = 64/223 (28%), Gaps = 11/223 (4%) Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 +S P + G D++ +EAT ++ N S Sbjct: 410 DQTNTGAVSGVTPRALKRLKKGADMNASGEDMEATSPGAAVDVKDINKRYIDAYVRLSPD 469 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH--DCYNPIIWENDACFTLEVRQ 181 R + L + +P D + Sbjct: 470 EPQWHITFVYGETRVENRHRMWSLLRTIRQSSALPWMVIGDFNETLWQFEHFSKNPRCET 529 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 Q ++ + ++ +++ D D W +N +R+D + + L A++ Sbjct: 530 QMQNFRDALYDCDLQDLGFKGVPHTY-DNRRDGW-RNVKVRLDRAVADDKWRDLFPEAQV 587 Query: 242 DTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTS----QNMKP 280 + SDH+P+++ + + + +Q +P Sbjct: 588 SHLV---SPCSDHSPILLEFIVKDTTRPRQKCLRYEIVWEREP 627 >gi|126734997|ref|ZP_01750743.1| possible endonuclease/exonuclease/phosphatase family protein [Roseobacter sp. CCS2] gi|126715552|gb|EBA12417.1| possible endonuclease/exonuclease/phosphatase family protein [Roseobacter sp. CCS2] Length = 399 Score = 36.7 bits (83), Expect = 3.4, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 22/63 (34%), Gaps = 32/63 (50%) Query: 1 MSVVTVATWNVNSIRARIHNLA---------------------AWIKEN----NPDIICL 35 MS T+A++NV NL AW+ + N D++C Sbjct: 1 MSRFTIASFNV-------KNLIEAEEEYYRFEEYTPEEYAWKRAWLADQLLTMNADVVCF 53 Query: 36 QET 38 QE Sbjct: 54 QEI 56 >gi|45199199|ref|NP_986228.1| AFR680Wp [Ashbya gossypii ATCC 10895] gi|44985339|gb|AAS54052.1| AFR680Wp [Ashbya gossypii ATCC 10895] Length = 461 Score = 36.7 bits (83), Expect = 3.4, Method: Composition-based stats. Identities = 35/259 (13%), Positives = 78/259 (30%), Gaps = 40/259 (15%) Query: 27 ENNPD---IICLQETKTEDK-NFPFETLQS-LNYH-IETCGQKSYNGVAILSKYQPIEIV 80 E + D ++ LQE + ++ + + YH G + G+AILSK Sbjct: 77 EEDADEYDVVALQEVWCKKDWDYIVDRCKGRYPYHRWFLSGIVAGPGLAILSKIPIESTF 136 Query: 81 THLPGDDLDVQARFIEATFTINTQTLRI---------------GNLYLPHGNPITSTKYD 125 + + A + + + ++ + +++ P+G Sbjct: 137 LYRFPINGRPSAFWRGDWYVGKSVSITLLRPTGPNAAPLCIMNSHMHAPYGLDGDEAYEC 196 Query: 126 DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQK 185 + F R AS + ++ GD N P Q + Sbjct: 197 HRACQAWDFSRLASVYRKSGYAVVIVGDLNSRPGSLPYKLLTHETGLEDSWE---QLNGE 253 Query: 186 LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG----IRIDHIMLSPEATSLLHSARI 241 + + + ++W ++G R+D+ ++ P+ + ++ Sbjct: 254 QDLQYIARLLPMDQIKYGGVTCNSTL-NTWRADRGPQEACRLDYALVDPDRLETIKAS-- 310 Query: 242 DTKPRGWTK------PSDH 254 R + SDH Sbjct: 311 ---VRFTERIPNVGSFSDH 326 >gi|147784566|emb|CAN70489.1| hypothetical protein VITISV_008665 [Vitis vinifera] Length = 450 Score = 36.7 bits (83), Expect = 3.5, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 3/38 (7%) Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 R+DH ++S E + I DH P+I+ Sbjct: 316 RLDHFLVSNEWEDHF--SGISQFAFXVIAF-DHCPIIL 350 >gi|147793829|emb|CAN71156.1| hypothetical protein VITISV_036760 [Vitis vinifera] Length = 1793 Score = 36.7 bits (83), Expect = 3.5, Method: Composition-based stats. Identities = 25/225 (11%), Positives = 62/225 (27%), Gaps = 28/225 (12%) Query: 36 QETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFI 95 QETK ++ ++SL + V I ++ +L + Sbjct: 890 QETKIQE--MSMGIVRSLG----VGRFLDWGAVDSRGAAGGIVVIWDNRMLELVDMQK-- 941 Query: 96 EATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYN 155 I + + + + + + EE G +N Sbjct: 942 --------GLFSISCTFKSCEDG-----FIWTFTGVYGPTLRRKRESFWEELGAIKGLWN 988 Query: 156 IIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW 215 +N I+ ++ + ++ + ++ +++ Sbjct: 989 GPWCVAGDFNAILRPEESSRGGSLNSIMRRFXEVIEELELKDLPXVGGPFTW----TGGT 1044 Query: 216 SKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 R+D +++ E S A + SDH P+++ Sbjct: 1045 DNQSFSRLDRFLVNEEWDSHFGDA---RQFLLPRPVSDHFPILMD 1086 >gi|288962170|ref|YP_003452465.1| hypothetical protein AZL_d00950 [Azospirillum sp. B510] gi|288914436|dbj|BAI75921.1| hypothetical protein AZL_d00950 [Azospirillum sp. B510] Length = 333 Score = 36.7 bits (83), Expect = 3.5, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 19/54 (35%), Gaps = 8/54 (14%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWT-----KPSD---HTPVIVSLDIPEPRK 268 +DH++ SP L I + PS H PV+ + ++ Sbjct: 275 LDHLLASPRLAEGLRQVAIHNEDLTDEVDHADGPSPVSYHAPVVAGFSLQPRQE 328 >gi|225452374|ref|XP_002273505.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 800 Score = 36.7 bits (83), Expect = 3.5, Method: Composition-based stats. Identities = 9/59 (15%), Positives = 20/59 (33%), Gaps = 7/59 (11%) Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 ++S+ + R+D +++ PR SDH P+++ Sbjct: 99 QGGVFSW----SGGRDNQSWARLDRYLVTQNWLDKFCGVVQCRLPR---PTSDHFPILL 150 >gi|224008777|ref|XP_002293347.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220970747|gb|EED89083.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 1064 Score = 36.7 bits (83), Expect = 3.5, Method: Composition-based stats. Identities = 11/120 (9%), Positives = 24/120 (20%) Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167 I ++D + E + + + + Sbjct: 83 IFVQMEALTGWPAKDEWDFWGLGDSNHPFIKANYPHHEGVWGWGSNADQVVMMVRNIRKS 142 Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227 + E N + Y++ D + G ID+ M Sbjct: 143 MVEYHDFLWDIGYAKTWDDANEYLENLYNERPPIEDFYAWRDDRVMDEAHWYGWFIDYWM 202 >gi|121699269|ref|XP_001267965.1| sphingomyelinase family protein, putative [Aspergillus clavatus NRRL 1] gi|119396107|gb|EAW06539.1| sphingomyelinase family protein, putative [Aspergillus clavatus NRRL 1] Length = 482 Score = 36.7 bits (83), Expect = 3.5, Method: Composition-based stats. Identities = 40/343 (11%), Positives = 76/343 (22%), Gaps = 65/343 (18%) Query: 4 VTVATWNVNSIR-------ARIHNLAAWIKENNP--DIICLQETKTEDK-----NFPFET 49 + + T N ++ R+ + + +P I+ LQE T+ + Sbjct: 18 IRILTLNCWGLKYISKFRHERMSEIGRQLAIADPPPQIVGLQECWTQQDYESIRQQTRDI 77 Query: 50 LQSLNYHI---------ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT 100 L ++ + F Sbjct: 78 LPYGKFYFGGIFGAGLAILSKWPIEESSMFAYPLNGRPTAFFRGDWFVGKGVACARIRFG 137 Query: 101 INTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRL---ELEEPLIFAGDYNII 157 Q + H + A E +I GD+N+I Sbjct: 138 PAAQDVAEVFCTHLHAPYEREPHDSYLCHRTAQAWEIAKLMRGAAERGHLVIGLGDFNMI 197 Query: 158 P--------------QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHH 203 P + A +Q + + + F + Sbjct: 198 PSSFAHRLIHAHAPVRDVWQVLHPDSSVGATIDPPEQQRNKPMPSAAFNLSENGATCDGK 257 Query: 204 LYSF-WDYYADSW-------------SKNKGIRIDHIMLS--------PEATSLLHSARI 241 ++ W G R+D+I + P A + S I Sbjct: 258 FNTWRWSKEDRKRLEKGHDVVVDPDAPCPYGKRLDYIFVGDGGFPPDYPAARWSVESVAI 317 Query: 242 ---DTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281 P SDH V + + D+ + P+ Sbjct: 318 GMTQRHPTLRCSLSDHFAVEAVIARDVASAGKSDAKEMVIHPV 360 >gi|115374836|ref|ZP_01462110.1| endonuclease/exonuclease/phosphatase family [Stigmatella aurantiaca DW4/3-1] gi|310817631|ref|YP_003949989.1| ap endonuclease, family 1 [Stigmatella aurantiaca DW4/3-1] gi|115368145|gb|EAU67106.1| endonuclease/exonuclease/phosphatase family [Stigmatella aurantiaca DW4/3-1] gi|309390703|gb|ADO68162.1| AP endonuclease, family 1 [Stigmatella aurantiaca DW4/3-1] Length = 269 Score = 36.7 bits (83), Expect = 3.5, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 21/52 (40%), Gaps = 7/52 (13%) Query: 215 WSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEP 266 + G RID +SP T+ SDH PV +++ +P P Sbjct: 225 RGPDTGSRIDGFYVSPAITTNNLH-------LLPQTGSDHRPVQMTIGVPAP 269 >gi|124505041|ref|XP_001351262.1| endonuclease/exonuclease/phosphatase family protein, putative [Plasmodium falciparum 3D7] gi|7768299|emb|CAB11122.2| endonuclease/exonuclease/phosphatase family protein, putative [Plasmodium falciparum 3D7] Length = 906 Score = 36.7 bits (83), Expect = 3.5, Method: Composition-based stats. Identities = 26/216 (12%), Positives = 48/216 (22%), Gaps = 17/216 (7%) Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 + I K+ N + ++S L L + Sbjct: 701 FQIGIYMHKNTNSIFLISNTHFYFHSLAQHIRALQSYTILHILQTLKKKYQLTYPEKEVY 760 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 I + ++ + A + D Y + Sbjct: 761 ---IILNGDFNTNFDSEVFHFIQGKDISPTSDIWFNAQLFKKEFDDLDKYPNLFELEKNK 817 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234 E L F A ++ W+ N +D+I LS Sbjct: 818 NNNEQSIIGPHLDRKKFMPLYSAYTKQDIQFTNWN-------NNFIDVLDYIFLSTNIKV 870 Query: 235 LLHSARIDTK-------PRGWTKPSDHTPVIVSLDI 263 ID + PSDH + +++ Sbjct: 871 RKVLKGIDKECFQKYKGALSPINPSDHISIAAEVEL 906 >gi|116198421|ref|XP_001225022.1| hypothetical protein CHGG_07366 [Chaetomium globosum CBS 148.51] gi|88178645|gb|EAQ86113.1| hypothetical protein CHGG_07366 [Chaetomium globosum CBS 148.51] Length = 346 Score = 36.7 bits (83), Expect = 3.5, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 21/55 (38%), Gaps = 3/55 (5%) Query: 17 RIHNLAAWIKENNPDIICLQETKTED--KNFPFETLQSLNYHIETCGQKSYNGVA 69 R + + E + DI+CLQE D ++F L Y + +A Sbjct: 40 RSERILQELHERDADILCLQEI-ATDVFRDFFSPELAQDGYKGVHWPRPKAKTMA 93 >gi|327259312|ref|XP_003214482.1| PREDICTED: protein angel homolog 1-like [Anolis carolinensis] Length = 660 Score = 36.7 bits (83), Expect = 3.6, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 26/65 (40%), Gaps = 5/65 (7%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFE---TLQSLNYHIETCGQKSYNGVAILSK 73 R+ N+ I+ +PDI+CLQE ++ +F + L + + + Sbjct: 284 RLTNILQEIQHWDPDILCLQEI--QENHFWEQLEPALTMMGFTCIYKRRTGRKTDGCAIC 341 Query: 74 YQPIE 78 Y+ Sbjct: 342 YKQNM 346 >gi|319785687|ref|YP_004145162.1| endonuclease/exonuclease/phosphatase [Pseudoxanthomonas suwonensis 11-1] gi|317464199|gb|ADV25931.1| Endonuclease/exonuclease/phosphatase [Pseudoxanthomonas suwonensis 11-1] Length = 575 Score = 36.7 bits (83), Expect = 3.6, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 23/56 (41%), Gaps = 14/56 (25%) Query: 222 RIDHIMLSPEATSLLHSA---RID-----------TKPRGWTKPSDHTPVIVSLDI 263 R+DH +LSP L A ++ G + SDH P+++ D+ Sbjct: 520 RLDHALLSPSLVPALRGAAEWHVNADEPDDAGYAGRNEPGPWRSSDHDPLLLGFDL 575 >gi|284434618|gb|ADB85341.1| putative retrotransposon protein [Phyllostachys edulis] Length = 486 Score = 36.7 bits (83), Expect = 3.6, Method: Composition-based stats. Identities = 10/91 (10%), Positives = 28/91 (30%), Gaps = 7/91 (7%) Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229 D + + + + + Y++ + N +D + +S Sbjct: 159 MGDKNSSNYNWKLIDMFNEFIYENDLIEIKKGGGKYTWTNKQKCPILVN----LDRVFVS 214 Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 + + + R SDH P++++ Sbjct: 215 LDWEAKFPLCHVQCLLR---VGSDHCPILLT 242 >gi|326479013|gb|EGE03023.1| glucose-repressible alcohol dehydrogenase transcriptional effector [Trichophyton equinum CBS 127.97] Length = 612 Score = 36.7 bits (83), Expect = 3.6, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 13/22 (59%) Query: 17 RIHNLAAWIKENNPDIICLQET 38 R L + I+ + DI+CLQE Sbjct: 330 RRDLLLSEIRGQDADIVCLQEV 351 >gi|326476302|gb|EGE00312.1| glucose-repressible alcohol dehydrogenase transcriptional effector [Trichophyton tonsurans CBS 112818] Length = 707 Score = 36.7 bits (83), Expect = 3.6, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 13/22 (59%) Query: 17 RIHNLAAWIKENNPDIICLQET 38 R L + I+ + DI+CLQE Sbjct: 355 RRDLLLSEIRGQDADIVCLQEV 376 >gi|327294443|ref|XP_003231917.1| glucose-repressible alcohol dehydrogenase transcriptional effector [Trichophyton rubrum CBS 118892] gi|326465862|gb|EGD91315.1| glucose-repressible alcohol dehydrogenase transcriptional effector [Trichophyton rubrum CBS 118892] Length = 802 Score = 36.7 bits (83), Expect = 3.6, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 13/22 (59%) Query: 17 RIHNLAAWIKENNPDIICLQET 38 R L + I+ + DI+CLQE Sbjct: 450 RRDLLLSEIRGQDADIVCLQEV 471 >gi|315056461|ref|XP_003177605.1| glucose-repressible alcohol dehydrogenase transcriptional effector protein [Arthroderma gypseum CBS 118893] gi|311339451|gb|EFQ98653.1| glucose-repressible alcohol dehydrogenase transcriptional effector protein [Arthroderma gypseum CBS 118893] Length = 801 Score = 36.7 bits (83), Expect = 3.6, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 13/22 (59%) Query: 17 RIHNLAAWIKENNPDIICLQET 38 R L + I+ + DI+CLQE Sbjct: 449 RRDLLLSEIRGQDADIVCLQEV 470 >gi|302665175|ref|XP_003024200.1| hypothetical protein TRV_01633 [Trichophyton verrucosum HKI 0517] gi|291188246|gb|EFE43589.1| hypothetical protein TRV_01633 [Trichophyton verrucosum HKI 0517] Length = 693 Score = 36.7 bits (83), Expect = 3.6, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 13/22 (59%) Query: 17 RIHNLAAWIKENNPDIICLQET 38 R L + I+ + DI+CLQE Sbjct: 341 RRDLLLSEIRGQDADIVCLQEV 362 >gi|302503490|ref|XP_003013705.1| hypothetical protein ARB_00156 [Arthroderma benhamiae CBS 112371] gi|291177270|gb|EFE33065.1| hypothetical protein ARB_00156 [Arthroderma benhamiae CBS 112371] Length = 691 Score = 36.7 bits (83), Expect = 3.6, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 13/22 (59%) Query: 17 RIHNLAAWIKENNPDIICLQET 38 R L + I+ + DI+CLQE Sbjct: 339 RRDLLLSEIRGQDADIVCLQEV 360 >gi|296826702|ref|XP_002851020.1| glucose-repressible alcohol dehydrogenase transcriptional effector [Arthroderma otae CBS 113480] gi|238838574|gb|EEQ28236.1| glucose-repressible alcohol dehydrogenase transcriptional effector [Arthroderma otae CBS 113480] Length = 703 Score = 36.7 bits (83), Expect = 3.6, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 13/22 (59%) Query: 17 RIHNLAAWIKENNPDIICLQET 38 R L + I+ + DI+CLQE Sbjct: 352 RRDLLLSEIRGQDADIVCLQEV 373 >gi|294633236|ref|ZP_06711795.1| secreted protein [Streptomyces sp. e14] gi|292831017|gb|EFF89367.1| secreted protein [Streptomyces sp. e14] Length = 299 Score = 36.7 bits (83), Expect = 3.6, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 7/43 (16%) Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 RID I SP A + T SDH PV+ L +P Sbjct: 260 RIDVIATSP-------DAVVTRARTVDTAASDHRPVVADLLLP 295 >gi|254418585|ref|ZP_05032309.1| endonuclease/exonuclease/phosphatase family [Brevundimonas sp. BAL3] gi|196184762|gb|EDX79738.1| endonuclease/exonuclease/phosphatase family [Brevundimonas sp. BAL3] Length = 317 Score = 36.7 bits (83), Expect = 3.7, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 10/54 (18%) Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 W +++ GI ID + SP+ L S RI G SDH PV+ Sbjct: 269 WPSRLPAFA---GITIDQVYRSPDLA--LISRRI-----GEPTGSDHYPVVTEF 312 >gi|190572318|ref|YP_001970163.1| hypothetical protein Smlt0242 [Stenotrophomonas maltophilia K279a] gi|190010240|emb|CAQ43848.1| unnamed protein product [Stenotrophomonas maltophilia K279a] Length = 570 Score = 36.7 bits (83), Expect = 3.7, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 21/55 (38%), Gaps = 14/55 (25%) Query: 222 RIDHIMLSPEATSLLHSA--------------RIDTKPRGWTKPSDHTPVIVSLD 262 R+DH +LSP L A +G + SDH P+++ D Sbjct: 515 RLDHALLSPGMAKRLRGAAEWHSNADEQDASGYQGRNVQGPWRSSDHDPLLLGFD 569 >gi|89055881|ref|YP_511332.1| endonuclease/exonuclease/phosphatase [Jannaschia sp. CCS1] gi|88865430|gb|ABD56307.1| Endonuclease/exonuclease/phosphatase [Jannaschia sp. CCS1] Length = 337 Score = 36.7 bits (83), Expect = 3.7, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 17/51 (33%), Gaps = 12/51 (23%) Query: 223 IDHIMLSPEATSLLH-----------SARIDTKPR-GWTKPSDHTPVIVSL 261 +D++M+SP T R SDH PV + L Sbjct: 286 LDYVMVSPALRLRADRWHIWHPFDDPDCWGQTDLREALLTASDHFPVSLDL 336 >gi|19112103|ref|NP_595311.1| inositol-polyphosphate 5-phosphatase (synaptojanin homolog 2) [Schizosaccharomyces pombe 972h-] gi|74638872|sp|Q9USQ6|SYJ2_SCHPO RecName: Full=Inositol-1,4,5-trisphosphate 5-phosphatase 2; AltName: Full=Synaptojanin-like protein 2 gi|5830513|emb|CAB54821.1| inositol-polyphosphate 5-phosphatase (synaptojanin homolog 2) [Schizosaccharomyces pombe] Length = 889 Score = 36.7 bits (83), Expect = 3.7, Method: Composition-based stats. Identities = 12/56 (21%), Positives = 18/56 (32%), Gaps = 10/56 (17%) Query: 209 DYYADSWSKNKGIRIDHIMLSPEATSLL-HSARIDTKPRGWTKPSDHTPVIVSLDI 263 DY + D I+ + T S I + SDH PV + + Sbjct: 814 DYDTSDKQRVPSW-TDRILATKSFTRNCYKSCDI--------RCSDHRPVFATFSL 860 >gi|24372731|ref|NP_716773.1| hypothetical protein SO_1148 [Shewanella oneidensis MR-1] gi|24346800|gb|AAN54218.1|AE015559_2 hypothetical protein SO_1148 [Shewanella oneidensis MR-1] Length = 377 Score = 36.7 bits (83), Expect = 3.7, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 13/58 (22%) Query: 219 KGIRIDHIMLSPEA-----TSLLHSARIDTKPRGWTKP-------S-DHTPVIVSLDI 263 KG +D+I+LS E SL T R +P S DH PV V L + Sbjct: 318 KGSVLDYILLSNEFDASDSRSLAQVVDYQTCDRHLVRPEYERDAYSTDHAPVWVELAL 375 >gi|195997029|ref|XP_002108383.1| hypothetical protein TRIADDRAFT_18427 [Trichoplax adhaerens] gi|190589159|gb|EDV29181.1| hypothetical protein TRIADDRAFT_18427 [Trichoplax adhaerens] Length = 378 Score = 36.7 bits (83), Expect = 3.8, Method: Composition-based stats. Identities = 11/109 (10%), Positives = 28/109 (25%), Gaps = 1/109 (0%) Query: 17 RIHNLAAWIKENNPDIICLQETKTED-KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75 R + + + N DI+CLQE + N+ ++ Y + N + ++ Sbjct: 36 RKEKIINELYQLNADIVCLQEVHDQHYHNYIKPMMKRKGYIGAYEKRFGNNFDGCATFFK 95 Query: 76 PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124 + + + + + Sbjct: 96 KTKFNMVQRCRVDYHVNGVSLMDRDNIGLIVMLEYRNPTSNRRHGQSNH 144 >gi|146276446|ref|YP_001166605.1| endonuclease/exonuclease/phosphatase [Rhodobacter sphaeroides ATCC 17025] gi|145554687|gb|ABP69300.1| Endonuclease/exonuclease/phosphatase [Rhodobacter sphaeroides ATCC 17025] Length = 339 Score = 36.7 bits (83), Expect = 3.8, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 20/53 (37%), Gaps = 12/53 (22%) Query: 223 IDHIMLSPEATSLLHSARI---DTKP---------RGWTKPSDHTPVIVSLDI 263 +D IM+SP+ RI P SDH PV + +++ Sbjct: 287 LDFIMISPDLAEKGPRWRIWHPLNDPNCFRIPELQEALLAASDHFPVTLDIEL 339 >gi|325299684|ref|YP_004259601.1| Alpha-N-acetylgalactosaminidase [Bacteroides salanitronis DSM 18170] gi|324319237|gb|ADY37128.1| Alpha-N-acetylgalactosaminidase [Bacteroides salanitronis DSM 18170] Length = 516 Score = 36.7 bits (83), Expect = 3.8, Method: Composition-based stats. Identities = 18/138 (13%), Positives = 37/138 (26%), Gaps = 9/138 (6%) Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYN-IIPQPHDCYNPIIWENDACFT 176 I + + +E+ + + + + +I EN Sbjct: 141 YIAADWLHHFPIAKCALENGKNVAIEVPSAMNLKECWELVNLSEKMRKHCMILENCCYDW 200 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWD-YYADSWSKNKGIRIDH-------IML 228 E+ Q + H+L FWD Y+ G R+D+ + Sbjct: 201 FEMNTLNMAQQGVFGEIIRAQGAYIHNLNEFWDHYWKKGEDDKLGWRLDYNMRHRGDVYA 260 Query: 229 SPEATSLLHSARIDTKPR 246 + + + I R Sbjct: 261 THGLGPVAQALNIHRGDR 278 >gi|118361195|ref|XP_001013828.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena thermophila] gi|89295595|gb|EAR93583.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena thermophila SB210] Length = 277 Score = 36.7 bits (83), Expect = 3.8, Method: Composition-based stats. Identities = 37/266 (13%), Positives = 77/266 (28%), Gaps = 37/266 (13%) Query: 4 VTVATWNV-----NSI-RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-H 56 + ++NV N + R+ L +PD IC+QE T+ + + + Sbjct: 36 LKFISYNVWFDQHNFVERSIE--LKKIFLNYDPDFICMQEV-TQPFLIQLAQDKEICQKY 92 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 + + V ILSKY I + + IN + + IG +L Sbjct: 93 YFSSPFVNQYDVFILSKYP---ISFKQMFFPSQMGRNLLFGEININNRKIVIGTTHLESL 149 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + + + + + + + + IP D Sbjct: 150 KNNDNYRMEQLKIIKELLSSYDESIFMGDFNMSKLNEEQSIP---------ENYIDIWKA 200 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI-MLSPEATSL 235 L + +Q ++R ++W HI ++ + Sbjct: 201 LHPNEEGHTMQASKKFPSVRFDRVLLRQSTYWSPS-------------HIEIIGKDPIPY 247 Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261 + + + PSDH + + Sbjct: 248 YQNHQ-KKQIYEIVTPSDHYGLYAEI 272 >gi|322787161|gb|EFZ13351.1| hypothetical protein SINV_00529 [Solenopsis invicta] Length = 103 Score = 36.7 bits (83), Expect = 3.8, Method: Composition-based stats. Identities = 11/39 (28%), Positives = 22/39 (56%), Gaps = 6/39 (15%) Query: 2 SVVTVATWNVNSIRARIHNLAAWIKENN--PDIICLQET 38 S + + WN S+R+++ +++ DI+C+QET Sbjct: 20 SNLRMFQWNCQSLRSKLP----FLQAQAELFDILCIQET 54 >gi|322709123|gb|EFZ00699.1| Endonuclease/Exonuclease/phosphatase family protein [Metarhizium anisopliae ARSEF 23] Length = 320 Score = 36.7 bits (83), Expect = 3.8, Method: Composition-based stats. Identities = 35/265 (13%), Positives = 74/265 (27%), Gaps = 23/265 (8%) Query: 9 WNVNSIRARIHNLAAWIK-----ENNPDIICLQE-TKTEDKNFPFETLQSLNYHIETCGQ 62 WNV R + + ++ +P +CLQE ++ + E + + G+ Sbjct: 67 WNV-----RCPKVCSQMRFITAGHESP-FVCLQESLSSQLNDIQAELGEP--WAHIGRGR 118 Query: 63 KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT---QTLRIGNLYLPHGNPI 119 S + ++ E + L+ N Sbjct: 119 GEGEADGEFSPVFYRSDAWACEVSETRWLSKTPEKPSRGWDAALNRIVTIGLFSHRANGT 178 Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 I R S +L ++ ++ + P E D + Sbjct: 179 KVVVMSTHFDHIGVEARKNSAKLLIKFANEWSHGKGVPPSVVLIGGDFNSETDDEAYRMM 238 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 + ++ R + H Y+ + RID + + T+ + + Sbjct: 239 TAPGSGMSDISDLVPERRHYGNHLTYTSF-----GEPNEHPQRIDFLFIQEPRTAHVETF 293 Query: 240 RIDTKPRGWT-KPSDHTPVIVSLDI 263 + + SDH P++ L I Sbjct: 294 GVLANSFDDQIRFSDHRPIVSDLQI 318 >gi|311895360|dbj|BAJ27768.1| hypothetical protein KSE_19440 [Kitasatospora setae KM-6054] Length = 809 Score = 36.7 bits (83), Expect = 3.8, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 23/64 (35%), Gaps = 8/64 (12%) Query: 200 DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVI 258 YS+ Y +S +DHI++SP + + SDH P + Sbjct: 752 PAEERYSYV-YQGNSQV------LDHILVSPALKPEKTHYDVVHINSEFAAQASDHDPQV 804 Query: 259 VSLD 262 V + Sbjct: 805 VRIK 808 >gi|301164489|emb|CBW24047.1| putative exported phosphatase [Bacteroides fragilis 638R] Length = 312 Score = 36.7 bits (83), Expect = 3.8, Method: Composition-based stats. Identities = 40/293 (13%), Positives = 79/293 (26%), Gaps = 37/293 (12%) Query: 4 VTVATWNV-------N----SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52 + V +WNV N ++++ D+I + ET S Sbjct: 29 LKVLSWNVWHAGHAKNYPEKG----CEGTIGILRKSQADVILMIET----YGAAPMVADS 80 Query: 53 LNYHIE------TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 L Y + L D+D + T+ + Sbjct: 81 LGYDYVLLSDNLCIYSRYPIKKTYLFPDSISTFNFGGVEIDMDGTPVRLFDTWLHYLPDM 140 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEE--PLIFAGDYNI-IPQPHDC 163 R+ + + + + I+R L + + P+I GD+N+ Sbjct: 141 RLVPTEQSETDILAWDDAGTRDNEIRRILSVLQPMIRQTDSIPMIMGGDFNVHSHLDWTE 200 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223 ++ + + + ++ + W Y + RI Sbjct: 201 ATKDMYHHGGAVVEWTVSKEMQNAGFKDSFREIHPEPEKNIGTTWIYDNEDKPLRSD-RI 259 Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTK--------PSDHTPVIVSLDIPEPRK 268 D I + + S + + K PSDH V+ + I K Sbjct: 260 DFIYYQGKTIRAITSESYNQELTKPLKFMGEEFFYPSDHGFVMTTFKISPLEK 312 >gi|300863989|ref|ZP_07108897.1| hypothetical protein OSCI_510002 [Oscillatoria sp. PCC 6506] gi|300338010|emb|CBN54043.1| hypothetical protein OSCI_510002 [Oscillatoria sp. PCC 6506] Length = 160 Score = 36.7 bits (83), Expect = 3.8, Method: Composition-based stats. Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 7/41 (17%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 IDH +++ ++ G SDH P+I L I Sbjct: 120 IDHCLIT-------KDIQVLNIRTGRKIGSDHLPLITDLAI 153 >gi|53715061|ref|YP_101053.1| hypothetical protein BF3777 [Bacteroides fragilis YCH46] gi|60683023|ref|YP_213167.1| putative exported phosphatase [Bacteroides fragilis NCTC 9343] gi|52217926|dbj|BAD50519.1| conserved hypothetical protein [Bacteroides fragilis YCH46] gi|60494457|emb|CAH09253.1| putative exported phosphatase [Bacteroides fragilis NCTC 9343] Length = 312 Score = 36.7 bits (83), Expect = 3.8, Method: Composition-based stats. Identities = 40/293 (13%), Positives = 79/293 (26%), Gaps = 37/293 (12%) Query: 4 VTVATWNV-------N----SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52 + V +WNV N ++++ D+I + ET S Sbjct: 29 LKVLSWNVWHAGHAKNYPEKG----CEGTIGILRKSQADVILMIET----YGAAPMVADS 80 Query: 53 LNYHIE------TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 L Y + L D+D + T+ + Sbjct: 81 LGYDYVLLSDNLCIYSRYPIKKTYLFPDSISTFNFGGVEIDMDGTPVRLFDTWLHYLPDM 140 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEE--PLIFAGDYNI-IPQPHDC 163 R+ + + + + I+R L + + P+I GD+N+ Sbjct: 141 RLVPTEQSETDILAWDDAGTRDNEIRRILSVLQPMIRQTDSIPMIMGGDFNVHSHLDWTD 200 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223 ++ + + + ++ + W Y + RI Sbjct: 201 ATKDMYHHGGAVVEWTVSKEMQNAGFKDSFREIHPEPEKNIGTTWIYDNEDKPLRSD-RI 259 Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTK--------PSDHTPVIVSLDIPEPRK 268 D I + + S + + K PSDH V+ + I K Sbjct: 260 DFIYYQGKTIRAITSESYNQELTKPLKFMGEEFFYPSDHGFVMTTFKISPLEK 312 >gi|225423450|ref|XP_002273870.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 989 Score = 36.7 bits (83), Expect = 3.9, Method: Composition-based stats. Identities = 18/137 (13%), Positives = 44/137 (32%), Gaps = 7/137 (5%) Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 + + + + EE G +N +N I+ +++ + Sbjct: 61 FIWTFTGVYGPTLRRKRESFWEELGTIKGFWNGPWCVAGDFNAIMRPDESSRGGSLNSIM 120 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 ++ + ++ +++ R+D +++ E S AR Sbjct: 121 RRFAEVIEELELKDLPMVGGPFTW----TGGTDNQSFSRLDRFLVNEEWDSHFGDARQFL 176 Query: 244 KPRGWTKPSDHTPVIVS 260 PR SDH P+++ Sbjct: 177 LPRPM---SDHFPILMD 190 >gi|115920143|ref|XP_001179756.1| PREDICTED: similar to ORF2-encoded protein [Strongylocentrotus purpuratus] gi|115938174|ref|XP_001199327.1| PREDICTED: similar to ORF2-encoded protein [Strongylocentrotus purpuratus] gi|115951793|ref|XP_001179039.1| PREDICTED: similar to ORF2-encoded protein [Strongylocentrotus purpuratus] gi|115969372|ref|XP_001177206.1| PREDICTED: similar to ORF2-encoded protein [Strongylocentrotus purpuratus] Length = 982 Score = 36.7 bits (83), Expect = 3.9, Method: Composition-based stats. Identities = 14/36 (38%), Positives = 20/36 (55%) Query: 9 WNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKN 44 WN NS+R + L I +NN DI+ L ET ++ Sbjct: 35 WNCNSVRNKTSLLFDHIIDNNVDIMFLTETWLRAED 70 >gi|12862428|dbj|BAB32464.1| Pol-like protein Pol-1 [Tricholoma matsutake] Length = 445 Score = 36.7 bits (83), Expect = 3.9, Method: Composition-based stats. Identities = 17/136 (12%), Positives = 31/136 (22%), Gaps = 19/136 (13%) Query: 126 DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQK 185 S + + GD+N+ D E Sbjct: 130 YSDSQHSAITLLFESVMTIPRLHFMCGDFNVRHASWD-----------PQGPEHSIHADH 178 Query: 186 LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKP 245 L + + + ID + + + + I + Sbjct: 179 LVETATALGLTRALPVVEGPTHFPPQQGLHPTV----IDLMFVPTDLR-FVLYCEIVPEA 233 Query: 246 RGWTKPSDHTPVIVSL 261 RG SDH P+ + L Sbjct: 234 RGT---SDHAPLTLVL 246 >gi|115472309|ref|NP_001059753.1| Os07g0510300 [Oryza sativa Japonica Group] gi|34394650|dbj|BAC83957.1| unknown protein [Oryza sativa Japonica Group] gi|113611289|dbj|BAF21667.1| Os07g0510300 [Oryza sativa Japonica Group] Length = 261 Score = 36.7 bits (83), Expect = 4.0, Method: Composition-based stats. Identities = 10/37 (27%), Positives = 20/37 (54%), Gaps = 5/37 (13%) Query: 7 ATWNVNS-----IRARIHNLAAWIKENNPDIICLQET 38 T+NV S + R+ + + ++++ PD+I QE Sbjct: 1 MTYNVWSREDVAVYKRMKAIGSLVEKHKPDVIFFQEI 37 >gi|326515450|dbj|BAK03638.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 1193 Score = 36.7 bits (83), Expect = 4.0, Method: Composition-based stats. Identities = 11/36 (30%), Positives = 19/36 (52%), Gaps = 2/36 (5%) Query: 6 VATWNVNSIR--ARIHNLAAWIKENNPDIICLQETK 39 + WNV + A+ +++ + I+CLQETK Sbjct: 8 IMCWNVCDLNNPAKRASVSEMAAAHRAAILCLQETK 43 >gi|224115140|ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1| predicted protein [Populus trichocarpa] Length = 1386 Score = 36.7 bits (83), Expect = 4.0, Method: Composition-based stats. Identities = 35/261 (13%), Positives = 78/261 (29%), Gaps = 34/261 (13%) Query: 4 VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + WN+ + I + L I + + L ET+ +DKN Sbjct: 806 MIIGCWNIRGLNDPIKHSELRRLIHQERIALFGLVETRVKDKN-----------KYNVTQ 854 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 + + + + + V+ + ++ I + I Sbjct: 855 LLLRSWSFLYNYDFSCRGRIWVCWNADTVKVDVFGMSDQAIHVSVTILATNISFNTSIIY 914 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + + + P I GD+N I D L+ Sbjct: 915 GDNNASLREALWSDIVSRSDGWESTPWILMGDFNAIRNQSDRLGGSTTWAGTMDRLDTVI 974 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR-IDHIMLSP--EATSLLHS 238 K+ ++ ++ Y++ ++ +N +R +D ++++ L Sbjct: 975 REAKVDDLRYSGMH---------YTW----SNQCPENLIMRKLDRVLVNEKWNLNFPLSE 1021 Query: 239 ARIDTKPRGWTKPSDHTPVIV 259 AR SDH+P++V Sbjct: 1022 ARFLPSGM-----SDHSPMVV 1037 >gi|156539995|ref|XP_001599888.1| PREDICTED: similar to pol-like protein [Nasonia vitripennis] Length = 963 Score = 36.7 bits (83), Expect = 4.0, Method: Composition-based stats. Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 2/42 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNF 45 + + WN S+R + + L + + N + CLQET ++ Sbjct: 7 LKILQWNCRSLRGKTYELESLLNNYN--VACLQETWLNSQDI 46 >gi|325179617|emb|CCA14015.1| conserved hypothetical protein [Albugo laibachii Nc14] Length = 394 Score = 36.7 bits (83), Expect = 4.1, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 41/117 (35%), Gaps = 7/117 (5%) Query: 3 VVTVATWNV--NSI--RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 ++ + T NV +SI R+ + ++ P +I QE +E + S Y Sbjct: 15 MLRILTLNVYFDSIALTLRMRAIGKCVERLRPGVIGFQEVTSESLAILKKQAWSRYYDCS 74 Query: 59 TCGQKSYNG---VAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 N V + + + I T+ + + TQTL +G + Sbjct: 75 ADCIAPSNNPYFVVLFTALPMLSIETYAFEETRMGRELICMHLRVSETQTLYVGTTH 131 >gi|322702385|gb|EFY94041.1| reverse transcriptase, putative [Metarhizium anisopliae ARSEF 23] Length = 1334 Score = 36.7 bits (83), Expect = 4.1, Method: Composition-based stats. Identities = 9/46 (19%), Positives = 18/46 (39%), Gaps = 4/46 (8%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268 ID ++ + E + + G SDH + + D+ P + Sbjct: 296 IDVVLATSELADEMVKCTLHPTDHG----SDHRAIQTTFDVAMPER 337 >gi|255727859|ref|XP_002548855.1| hypothetical protein CTRG_03152 [Candida tropicalis MYA-3404] gi|240133171|gb|EER32727.1| hypothetical protein CTRG_03152 [Candida tropicalis MYA-3404] Length = 815 Score = 36.7 bits (83), Expect = 4.1, Method: Composition-based stats. Identities = 16/81 (19%), Positives = 29/81 (35%), Gaps = 16/81 (19%) Query: 208 WDYYADSWSKNKGIRIDHIMLS-PEATSLLHSARIDTKPRG-------WTKPSDHTPVIV 259 + ++ N ID+I S P ++D + PSDH P++ Sbjct: 733 FTNMTPGFTDN----IDYIWYSTPTLQVKGLLGKVDEEYTSHCIGFPDANFPSDHVPILA 788 Query: 260 SLDIPEPRKKQQDSTSQNMKP 280 + KK ++ + KP Sbjct: 789 RFQV----KKGSNAKKPDFKP 805 >gi|255071691|ref|XP_002499520.1| predicted protein [Micromonas sp. RCC299] gi|226514782|gb|ACO60778.1| predicted protein [Micromonas sp. RCC299] Length = 414 Score = 36.7 bits (83), Expect = 4.1, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 16/49 (32%) Query: 6 VATWNVN-----------SIR---ARIHNLAAWIKENNP--DIICLQET 38 + TWNV S+R AR +A I E P D++ LQE Sbjct: 80 IVTWNVQMLPGVLPGCAGSVRHLVARAEQIAERILELEPWPDVVVLQEV 128 >gi|45478186|gb|AAS66264.1| LRRGT00173 [Rattus norvegicus] Length = 931 Score = 36.7 bits (83), Expect = 4.1, Method: Composition-based stats. Identities = 38/219 (17%), Positives = 60/219 (27%), Gaps = 30/219 (13%) Query: 36 QETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFI 95 QET DK+ + ++ + GQK GVAIL + + Sbjct: 283 QETHLRDKDRHYLRVKGWKTTFQANGQKKQAGVAILISNKINF--------------QLK 328 Query: 96 EATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYN 155 + I I + + + + + I GD+N Sbjct: 329 VIKKDKKGHFIFIKGKIHQDELSILNIYAPNTRAPTYVKETLLKLKTHIAPHTIIVGDFN 388 Query: 156 IIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW 215 D +D EV TD R + Y+F+ ++ Sbjct: 389 TPLSSMDRSGKQKLNSDVDRLREVMSQM------DLTDIYRTFYPKAKGYTFFSAPHGTF 442 Query: 216 SKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDH 254 SK IDHI+ + I SDH Sbjct: 443 SK-----IDHIIGQKTGLNRYRKIEIIPCVL-----SDH 471 >gi|290981586|ref|XP_002673511.1| predicted protein [Naegleria gruberi] gi|284087095|gb|EFC40767.1| predicted protein [Naegleria gruberi] Length = 292 Score = 36.7 bits (83), Expect = 4.1, Method: Composition-based stats. Identities = 22/116 (18%), Positives = 39/116 (33%), Gaps = 14/116 (12%) Query: 1 MSVVTVATWNVNS-IRARIHNLAAWI---KENNPDIICLQE-TKTEDKNFPFETLQSLNY 55 ++ V T+NV ++ R + I K+ N DI+CLQE TK E + +L+Y Sbjct: 174 LTSFKVLTFNVWFDLQDREDRMIKIIDICKDCNADIVCLQEMTKGT-----LEIMTNLSY 228 Query: 56 ----HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107 + + N + +Y + V + Sbjct: 229 VRENFYISDSVEFGNRTVMPYEYANDKNVYEQTSNKHVSVGNECRIECEWRVGVFY 284 >gi|152974643|ref|YP_001374160.1| endonuclease/exonuclease/phosphatase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152023395|gb|ABS21165.1| Endonuclease/exonuclease/phosphatase [Bacillus cytotoxicus NVH 391-98] Length = 790 Score = 36.7 bits (83), Expect = 4.1, Method: Composition-based stats. Identities = 10/48 (20%), Positives = 21/48 (43%), Gaps = 3/48 (6%) Query: 223 IDHIMLSPEATSL-LHSARIDTKPRGWT--KPSDHTPVIVSLDIPEPR 267 +DHI+++ + + + SDH PV+ +D+ + R Sbjct: 741 LDHILVTNNIANHTIVDPVHLNTNMMKEHGRVSDHDPVLAQIDLKKAR 788 >gi|242066048|ref|XP_002454313.1| hypothetical protein SORBIDRAFT_04g028482 [Sorghum bicolor] gi|241934144|gb|EES07289.1| hypothetical protein SORBIDRAFT_04g028482 [Sorghum bicolor] Length = 509 Score = 36.7 bits (83), Expect = 4.2, Method: Composition-based stats. Identities = 28/241 (11%), Positives = 60/241 (24%), Gaps = 29/241 (12%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLP 84 +++ P +I + ET +++L Y + + N Sbjct: 220 LRDYAPAVIFIMET-----QINKYRVENLRYSLGYDDSFAVNSSGKSGGLGLFWKNDVNV 274 Query: 85 GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL 144 + + R+ +Y + +D F Sbjct: 275 SIKKFSKYHIDTIIEENGKEPWRMSFIYGEPNRSLRHRTWDIMKQMRSDFDLPWLCI--G 332 Query: 145 EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL 204 + I D + P + Y + + L Sbjct: 333 DFNEILRRDEQLGPNIREDYLMEGFREAVDVCQLCDIGYMGLDWTFEKKVA--------- 383 Query: 205 YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 + + +R+D + S +S A + SDH P+++SL + Sbjct: 384 -------GGHFVR---VRLDRALASASWSSYFPFA-VLRHLTAVK--SDHCPILLSLQLD 430 Query: 265 E 265 E Sbjct: 431 E 431 >gi|147775294|emb|CAN61586.1| hypothetical protein VITISV_042821 [Vitis vinifera] Length = 1302 Score = 36.7 bits (83), Expect = 4.2, Method: Composition-based stats. Identities = 7/59 (11%), Positives = 22/59 (37%), Gaps = 7/59 (11%) Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 +++ + + R+D +++ + + + R SDH P+++ Sbjct: 465 QEGAFTW----SGGRNNQSWARLDRFLVTQQWLEMFSGIA---QCRLQRPTSDHFPILL 516 >gi|255637077|gb|ACU18870.1| unknown [Glycine max] Length = 393 Score = 36.7 bits (83), Expect = 4.2, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 19/40 (47%), Gaps = 7/40 (17%) Query: 5 TVATWNVNSIR------ARIHNLAAWIKENNPDIICLQET 38 + ++NV R R+ + ++ ++PD IC QE Sbjct: 136 KILSYNVW-FREDLELHKRMKAIGDLVQFHSPDFICFQEV 174 >gi|171910435|ref|ZP_02925905.1| hypothetical protein VspiD_04665 [Verrucomicrobium spinosum DSM 4136] Length = 280 Score = 36.7 bits (83), Expect = 4.2, Method: Composition-based stats. Identities = 39/275 (14%), Positives = 76/275 (27%), Gaps = 39/275 (14%) Query: 3 VVTVATWNV-----------NSIRARIHNLAAWIK---ENNPDIICLQETKTED--KNFP 46 VV + TWN+ + R + + D++ LQE + +D + Sbjct: 15 VVRLVTWNLEWFPGRKPTATQGKKDR--HFLEVAAVIPQFRADVMVLQEVRDQDSAEKL- 71 Query: 47 FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 + + H+ + + G L + + + + A L Sbjct: 72 AKLMPGFQVHVVSRFKDEVGGAVGLQQIAIMSRFPADGAWAESWKRGWANAPRGYVYAKL 131 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 + L + D I + Q L + AG+ ++ + Sbjct: 132 IVEGRPLHVYGLHLKSNLGDPIKNTSKREDAVEQLLGHIKDQCKAGEPVVVTGDFNTSKE 191 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226 + L++ + G R T Y + DH+ Sbjct: 192 QLNLAGDRTLLKLEEQGFFWAFEGVPLKDRITIPGGGRY-----PDACF--------DHV 238 Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + + + A + G SDH PV V L Sbjct: 239 Y-TRDLGRPV--AAVLKDTPG----SDHFPVAVDL 266 >gi|32472396|ref|NP_865390.1| hypothetical protein RB3242 [Rhodopirellula baltica SH 1] gi|32443632|emb|CAD73074.1| hypothetical protein-transmembrane prediction [Rhodopirellula baltica SH 1] Length = 439 Score = 36.7 bits (83), Expect = 4.2, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 29/57 (50%), Gaps = 6/57 (10%) Query: 215 WSKNKGIRIDHIMLSPEATSLLHSARIDTKPR----GWTKPSDHTPVIVSLDIPEPR 267 + +N+ IR+D+++ S ++ SA + + + +DH + + ++ P PR Sbjct: 385 FGRNE-IRVDYVLPSSNL-HVIRSAVVWPDAQTDLGKRVRATDHRMIWIDIERPSPR 439 >gi|242047566|ref|XP_002461529.1| hypothetical protein SORBIDRAFT_02g004230 [Sorghum bicolor] gi|241924906|gb|EER98050.1| hypothetical protein SORBIDRAFT_02g004230 [Sorghum bicolor] Length = 569 Score = 36.7 bits (83), Expect = 4.2, Method: Composition-based stats. Identities = 18/113 (15%), Positives = 35/113 (30%), Gaps = 16/113 (14%) Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWD--YYADSWSKNKGIRID 224 + ++R + + R + YSF Y + + R Sbjct: 436 MHNWKQLLEKDQLRMQQRYGRVFQGWREGRIYFPPTYKYSFNSDRYAGEGRHPKEKRR-- 493 Query: 225 HIMLSPEATSLLHSAR----IDTKPRGWTKPSDHTPV----IVSLDIPEPRKK 269 +P + + RG ++ SDH PV + +DI R++ Sbjct: 494 ----TPAWCDRILWYGNGLNQLSYVRGESRFSDHRPVYSIFLAEVDIVHQRRR 542 >gi|158338869|ref|YP_001520046.1| hypothetical protein AM1_5782 [Acaryochloris marina MBIC11017] gi|158309110|gb|ABW30727.1| conserved hypothetical protein [Acaryochloris marina MBIC11017] Length = 290 Score = 36.7 bits (83), Expect = 4.2, Method: Composition-based stats. Identities = 43/264 (16%), Positives = 73/264 (27%), Gaps = 51/264 (19%) Query: 4 VTVATWNVNSIRARIHN-----LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58 + V +N+ I N +A I+ +PDI+ L E K E L+Y Sbjct: 71 MRVMAYNI-----WIDNPNTDAIAQSIQGEDPDILFLSEV---SKPMMAELQSRLSY--P 120 Query: 59 TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118 + + A+ S+Y +E T+ G + + A + + I ++ P Sbjct: 121 HDYRTEGSNNALFSRYPILEATTNDFGVTTKGRTFSLVAKLQVEGNPVTIIGIHPPVPII 180 Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178 ++ + +E LI GD+N P Sbjct: 181 PGFFHIRNRQLDTFAKASQS-----IEGKLIVLGDFNATPWSPYFQRFERISQLQNSGHR 235 Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238 N T +DHI Sbjct: 236 QWIWATWYFNQTLTTRYIKIP-----------------------LDHI--------ETRG 264 Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262 + G T SDH P++ L+ Sbjct: 265 FTVLKTWTGQTGGSDHKPIVTVLE 288 >gi|147828499|emb|CAN77578.1| hypothetical protein VITISV_015344 [Vitis vinifera] Length = 1102 Score = 36.7 bits (83), Expect = 4.2, Method: Composition-based stats. Identities = 10/45 (22%), Positives = 17/45 (37%), Gaps = 4/45 (8%) Query: 216 SKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 N+ R+D ++S PR SDH P+++ Sbjct: 564 QNNQTWARLDRFLVSLSWIDQFSGINQCRLPRSI---SDHFPIML 605 >gi|304395763|ref|ZP_07377646.1| Endonuclease/exonuclease/phosphatase [Pantoea sp. aB] gi|304357057|gb|EFM21421.1| Endonuclease/exonuclease/phosphatase [Pantoea sp. aB] Length = 253 Score = 36.3 bits (82), Expect = 4.3, Method: Composition-based stats. Identities = 31/260 (11%), Positives = 54/260 (20%), Gaps = 44/260 (16%) Query: 15 RARIHNLAAWIKENNPDIICLQE---TKTEDKNFPFETLQSLNYHIETCGQKSYNGVAIL 71 R + L ++ D++ LQE T S +Y E +N A Sbjct: 27 RFILPELRDAVRATEADVVFLQEVMGTHAIHALNHEAWPDSPHY--EFLADTIWNDFAYG 84 Query: 72 SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ----TLRIGNLYLPHGNPITSTKYDDK 127 E + ++ L + Sbjct: 85 RNAVYPEGHHGNAVLSRFPITEYENRDISVAGSENRGMLHCQIALPEPHGTLHVICVHLG 144 Query: 128 ISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQ 187 + R + + A EV Sbjct: 145 LKEAHRHAQMKKICEMVNSLPPDAPVVVAGDFNDWQRRANSILKQGAGLKEVFSMKTGRP 204 Query: 188 NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK--- 244 F +R+D I + +A + Sbjct: 205 ARTFPARFPI-----------------------LRLDRIYV--------RNATVSHPWAL 233 Query: 245 PRG-WTKPSDHTPVIVSLDI 263 PR W+ SDH P+ V + + Sbjct: 234 PRKPWSHLSDHAPLAVEIHL 253 >gi|171682868|ref|XP_001906377.1| hypothetical protein [Podospora anserina S mat+] gi|170941393|emb|CAP67043.1| unnamed protein product [Podospora anserina S mat+] Length = 619 Score = 36.3 bits (82), Expect = 4.3, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 26/70 (37%), Gaps = 13/70 (18%) Query: 199 HDTHHLYSF-WDYYADSWSKNKGIRIDHIMLSPEATSLLHS----ARIDTKPRGWTKPSD 253 Y++ +D A + +DH+ +SP + S ++T SD Sbjct: 556 IKPTERYTYAFDMNAQA--------LDHMYVSPSLAASSKSDFEHIHVNTWGSYAEMVSD 607 Query: 254 HTPVIVSLDI 263 H P + D+ Sbjct: 608 HDPSVALFDL 617 >gi|77166097|ref|YP_344622.1| endonuclease/exonuclease/phosphatase [Nitrosococcus oceani ATCC 19707] gi|254435463|ref|ZP_05048970.1| endonuclease/exonuclease/phosphatase family [Nitrosococcus oceani AFC27] gi|76884411|gb|ABA59092.1| Endonuclease/exonuclease/phosphatase [Nitrosococcus oceani ATCC 19707] gi|207088574|gb|EDZ65846.1| endonuclease/exonuclease/phosphatase family [Nitrosococcus oceani AFC27] Length = 288 Score = 36.3 bits (82), Expect = 4.3, Method: Composition-based stats. Identities = 12/66 (18%), Positives = 21/66 (31%), Gaps = 14/66 (21%) Query: 200 DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 + ++ + IDHI++SP I SDH P+ Sbjct: 210 PVTKIATYPSWRPK-------RHIDHILVSPSLE------VIQVGALAHAV-SDHLPLAT 255 Query: 260 SLDIPE 265 + +P Sbjct: 256 EILVPA 261 >gi|290976752|ref|XP_002671103.1| predicted protein [Naegleria gruberi] gi|284084669|gb|EFC38359.1| predicted protein [Naegleria gruberi] Length = 358 Score = 36.3 bits (82), Expect = 4.4, Method: Composition-based stats. Identities = 42/334 (12%), Positives = 83/334 (24%), Gaps = 73/334 (21%) Query: 2 SVVTVATWN--------VNSIRARIHNLAAWIKENNPDIICLQETKTEDKN--FPFETLQ 51 + + +A++N VN + + I + + D++ LQE + + E Sbjct: 30 NNLKIASFNTALVPGTPVN-----VKKIIETIPK-DLDVVFLQEVWLQSHSHLIAEELKS 83 Query: 52 SLNYHIE---------------TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIE 96 S Y + + T P + +A + Sbjct: 84 SYPYSFHGHKEVLNEASCTDDSFHRFALPFLHCVRENNLTLSWTTLGPCAEFLSRAAYGN 143 Query: 97 ATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIK------------------------ 132 T + N + + T + Sbjct: 144 FKCISCVLTSIVENKNMANCYTPGHTGQEFLYDGSNGLMVLSKTPISRANYTSYPSFLLS 203 Query: 133 ----RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN 188 +E P F D ++ QP I+ + + + Sbjct: 204 RGLLEMCINGLYIMESHFPFNFGIDLPVMYQPEFSRMVIMKRPNILVGDLNSGPMTQPEG 263 Query: 189 MGFTDAIRATHDTHHLYSF------WDYY--ADSWSKNKGIRIDHIML---SPEATSLLH 237 + +F W+ +D +N G+ DHIM+ S + Sbjct: 264 YETLAGYGYQSIDPNKATFCVNGLNWESGDCSDDPERNTGM--DHIMVDKFSRILEWNFN 321 Query: 238 SARIDT-KPRGWTKPSDHTPVIVSLDIPEPRKKQ 270 ++ PSDH + L+ RK Sbjct: 322 NSFKLQLFGDSTPTPSDHLGITTELNYNMARKHP 355 >gi|254520361|ref|ZP_05132417.1| endonuclease/exonuclease/phosphatase [Clostridium sp. 7_2_43FAA] gi|226914110|gb|EEH99311.1| endonuclease/exonuclease/phosphatase [Clostridium sp. 7_2_43FAA] Length = 263 Score = 36.3 bits (82), Expect = 4.4, Method: Composition-based stats. Identities = 33/282 (11%), Positives = 66/282 (23%), Gaps = 43/282 (15%) Query: 4 VTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQET-----KT------EDKNF-- 45 + + T N +S +I LA I E D+I QE K+ ++ NF Sbjct: 1 MKLLTLNCHSWMEENQLEKIKYLAEIINEKQYDVISFQEVSQSIEKSVVSGDIKEDNFIY 60 Query: 46 ----PFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI 101 E L NY + ++ + Sbjct: 61 LLNKELEKLGEFNYKYVWDFSHIGYDIYEEGLSILTRHEIEDVELFYITKSSEKTFYKSR 120 Query: 102 NTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161 I + D ++ + N + Sbjct: 121 KIIKATITIDNKKINFFTCHLGWWDDEEESFKYQVDNLMTKVNGISFVMGDINNNALIRN 180 Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI 221 + Y+ ++ + + + G + Sbjct: 181 EGYDYLLSKGLIDTYDIALEKDNGITVQGEIAGWEGKTENK------------------- 221 Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 R+D I + + + + + + SDH V +DI Sbjct: 222 RLDIIFTNTDV--NVKKSNVIFNDINKSIISDHYGVEADIDI 261 >gi|89074807|ref|ZP_01161261.1| putative exported phosphatase [Photobacterium sp. SKA34] gi|89049382|gb|EAR54944.1| putative exported phosphatase [Photobacterium sp. SKA34] Length = 342 Score = 36.3 bits (82), Expect = 4.4, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 26/76 (34%), Gaps = 7/76 (9%) Query: 191 FTDAIRATHDTHHLYSF--WDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRG- 247 F DA R H ++ W + N RID+I L S ID+ G Sbjct: 268 FKDAFREMHPNVLTHTGKSWSPQGGDIAPN---RIDYIYYKGSKLQALESVTIDSIAAGT 324 Query: 248 -WTKPSDHTPVIVSLD 262 SDH+ V Sbjct: 325 TNDTTSDHSAVFARFK 340 >gi|317156327|ref|XP_001825633.2| reverse transcriptase [Aspergillus oryzae RIB40] Length = 1393 Score = 36.3 bits (82), Expect = 4.5, Method: Composition-based stats. Identities = 31/270 (11%), Positives = 64/270 (23%), Gaps = 35/270 (12%) Query: 13 SIRARIH-NLAAWIKE---NNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGV 68 I AR+ + A I + N DI+ +QE L + + H+ Sbjct: 113 GI-ARLGAGMEALINDSQTQNLDILLIQE----------PPLTAYSTHVNH-----SAWH 156 Query: 69 AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKI 128 S Q + N + ++ + + Y Sbjct: 157 LYQSTCQEDTPKKRSLLYVNRRISTASHRQIKCNHPDVTAVKMWTMERQMLIFSIYVPTT 216 Query: 129 SWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN 188 + + + Q + E +P + + R +++ Sbjct: 217 NHSQPMEEVSIQAMLEEIETCIQQAIETTDKPTTIIMAGDFNRHHPMWSKNRIYHVAIEH 276 Query: 189 MGFTDAIRATHD-----THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243 H ++W + ID + L + Sbjct: 277 AEELVTFFHKHGLQPCLPRGTPTYWSMSYPGSNST----IDLTVTDTP--ESLIKCHLYH 330 Query: 244 KPRGWTKPSDHTPVIVSLDIPEPRKKQQDS 273 G SDH V + R +++ Sbjct: 331 DHYG----SDHRAVYSEWSLDPSRNAEREP 356 >gi|270295774|ref|ZP_06201974.1| glycosyl hydrolase family 109 protein [Bacteroides sp. D20] gi|270273178|gb|EFA19040.1| glycosyl hydrolase family 109 protein [Bacteroides sp. D20] Length = 512 Score = 36.3 bits (82), Expect = 4.5, Method: Composition-based stats. Identities = 17/104 (16%), Positives = 30/104 (28%), Gaps = 9/104 (8%) Query: 151 AGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWD- 209 D I + I EN E+ + H+L FWD Sbjct: 175 CWDL-INLSESTRKHCFILENCCYDWFEMNTLNMAQHGVFGEVIRAQGAYIHNLSPFWDH 233 Query: 210 YYADSWSKNKGIRIDH-------IMLSPEATSLLHSARIDTKPR 246 Y+ + + G R+D+ + + + + I R Sbjct: 234 YWKNGENDKLGWRLDYNMKHRGDVYATHGLGPVAQALDIHRGDR 277 >gi|254562926|ref|YP_003070021.1| hypothetical protein METDI4575 [Methylobacterium extorquens DM4] gi|254270204|emb|CAX26198.1| conserved hypothetical protein; putative membrane protein [Methylobacterium extorquens DM4] Length = 348 Score = 36.3 bits (82), Expect = 4.5, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 15/41 (36%), Gaps = 7/41 (17%) Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +DHI S L + R SDH P+ V L Sbjct: 284 WPLDHIFFSEHFL--LSDMQ-----RLNDVGSDHFPIWVDL 317 >gi|240140331|ref|YP_002964810.1| hypothetical protein MexAM1_META1p3842 [Methylobacterium extorquens AM1] gi|240010307|gb|ACS41533.1| conserved hypothetical protein; putative membrane protein [Methylobacterium extorquens AM1] Length = 348 Score = 36.3 bits (82), Expect = 4.5, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 15/41 (36%), Gaps = 7/41 (17%) Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +DHI S L + R SDH P+ V L Sbjct: 284 WPLDHIFFSEHFL--LSDMQ-----RLNDVGSDHFPIWVDL 317 >gi|218531799|ref|YP_002422615.1| endonuclease/exonuclease/phosphatase [Methylobacterium chloromethanicum CM4] gi|218524102|gb|ACK84687.1| Endonuclease/exonuclease/phosphatase [Methylobacterium chloromethanicum CM4] Length = 353 Score = 36.3 bits (82), Expect = 4.5, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 15/41 (36%), Gaps = 7/41 (17%) Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +DHI S L + R SDH P+ V L Sbjct: 289 WPLDHIFFSEHFL--LSDMQ-----RLNDVGSDHFPIWVDL 322 >gi|163852991|ref|YP_001641034.1| endonuclease/exonuclease/phosphatase [Methylobacterium extorquens PA1] gi|163664596|gb|ABY31963.1| Endonuclease/exonuclease/phosphatase [Methylobacterium extorquens PA1] Length = 353 Score = 36.3 bits (82), Expect = 4.5, Method: Composition-based stats. Identities = 12/41 (29%), Positives = 15/41 (36%), Gaps = 7/41 (17%) Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 +DHI S L + R SDH P+ V L Sbjct: 289 WPLDHIFFSEHFL--LSDMQ-----RLNDVGSDHFPIWVDL 322 >gi|147854675|emb|CAN80245.1| hypothetical protein VITISV_031023 [Vitis vinifera] Length = 1636 Score = 36.3 bits (82), Expect = 4.5, Method: Composition-based stats. Identities = 19/143 (13%), Positives = 48/143 (33%), Gaps = 11/143 (7%) Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + + + + + EE G ++ +N I + + E+ Sbjct: 748 CMDGMRWVFTGVYGPVCRRDREVFWEELGSIKGLWSDPWCVGGDFNMIRYPEERRRGGEL 807 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 S ++ + +R L+++ + R+D +++ E + + A Sbjct: 808 SASMRRFTEVVEDLELRDYPLQGGLFTW----RGGLNNQSQSRLDRFLVTDEWDRMFNGA 863 Query: 240 --RIDTKPRGWTKPSDHTPVIVS 260 I +P SDH P+++ Sbjct: 864 KQGILARP-----VSDHFPILLE 881 >gi|126272963|ref|XP_001371745.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 729 Score = 36.3 bits (82), Expect = 4.5, Method: Composition-based stats. Identities = 40/287 (13%), Positives = 85/287 (29%), Gaps = 44/287 (15%) Query: 8 TWNVNSIRARIHNLAAWI--KENNPDIICL--QETKTEDKNF-------PFETL----QS 52 TWNVN ++ L W+ + PDI CL QE + F E L ++ Sbjct: 89 TWNVNG-QSPDSGLEPWLNCDRDPPDIYCLGFQELDLSIEAFFYFESTKEHEWLASVKRA 147 Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 L++ + + V ++ + D + N + + ++ Sbjct: 148 LHFKSKYNKVQLVRLVGMMLLIFARKEHCMYIQDVVTDTVGTGLMGKMGNKGAVAVRFMF 207 Query: 113 LPHGNPITSTKYDDKISWIK-RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171 I ++ ++ ++ R + + + G NI+ + + Sbjct: 208 HNTTFCIVNSHLAAQMEDVEGRNQDYKDICARMSFLVPNQGHLNIMKHDVVIWLGDLNYR 267 Query: 172 DACFTLEVRQSFQKLQNMGF-------------TDAIRATHDTHHLY--SF-WDYYADSW 215 ++ + + ++ A + + ++ +D D W Sbjct: 268 IYIYSAKEVKWLISRNDLHKLLKLDQLNIQRSDKKAFTDFTEGEIRFIPTYKFDTKTDRW 327 Query: 216 SKNKGIRIDHIMLSPEATSLL--HSARID---TKPRGWTKPSDHTPV 257 + RI P + I + K SDH PV Sbjct: 328 DSSGKCRI------PAWCDRILWKGENIQQLRYQSHMGLKTSDHKPV 368 >gi|160890679|ref|ZP_02071682.1| hypothetical protein BACUNI_03124 [Bacteroides uniformis ATCC 8492] gi|317479793|ref|ZP_07938913.1| oxidoreductase family protein [Bacteroides sp. 4_1_36] gi|156859678|gb|EDO53109.1| hypothetical protein BACUNI_03124 [Bacteroides uniformis ATCC 8492] gi|316903999|gb|EFV25833.1| oxidoreductase family protein [Bacteroides sp. 4_1_36] Length = 512 Score = 36.3 bits (82), Expect = 4.5, Method: Composition-based stats. Identities = 17/104 (16%), Positives = 30/104 (28%), Gaps = 9/104 (8%) Query: 151 AGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWD- 209 D I + I EN E+ + H+L FWD Sbjct: 175 CWDL-INLSESTRKHCFILENCCYDWFEMNTLNMAQHGVFGEVIRAQGAYIHNLSPFWDH 233 Query: 210 YYADSWSKNKGIRIDH-------IMLSPEATSLLHSARIDTKPR 246 Y+ + + G R+D+ + + + + I R Sbjct: 234 YWKNGENDKLGWRLDYNMKHRGDVYATHGLGPVAQALDIHRGDR 277 >gi|281340144|gb|EFB15728.1| hypothetical protein PANDA_008703 [Ailuropoda melanoleuca] Length = 95 Score = 36.3 bits (82), Expect = 4.6, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 23/77 (29%), Gaps = 11/77 (14%) Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237 E + M TD R H Y+F+ ++ IDHI+ + Sbjct: 20 ETMALNDTQELMNLTDIFRKFHP-KTEYTFFSSAHGTFYS-----IDHILAHKTILNKFK 73 Query: 238 SARIDTKPRGWTKPSDH 254 + SDH Sbjct: 74 KIEVIPCI-----FSDH 85 >gi|260788622|ref|XP_002589348.1| hypothetical protein BRAFLDRAFT_77801 [Branchiostoma floridae] gi|229274525|gb|EEN45359.1| hypothetical protein BRAFLDRAFT_77801 [Branchiostoma floridae] Length = 392 Score = 36.3 bits (82), Expect = 4.6, Method: Composition-based stats. Identities = 19/144 (13%), Positives = 33/144 (22%), Gaps = 18/144 (12%) Query: 134 FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTD 193 F + + I AGD N P M Sbjct: 153 HHYFYRHMSQSADVNILAGDLNNQPFELGLKIIQSNTGMEDAWPSAEHKNADDSGMTCWC 212 Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM--LSPEATSLLHSAR--IDTKPRGWT 249 + + +RID++ S + P Sbjct: 213 SENNYNSGCPE--------------APMRIDYVFYKGSARCRVKCVHCETTMHKVPGKPF 258 Query: 250 KPSDHTPVIVSLDIPEPRKKQQDS 273 SDH V+ L++ + + D+ Sbjct: 259 NYSDHEGVLAHLELEKVSEPSDDN 282 >gi|156347587|ref|XP_001621682.1| hypothetical protein NEMVEDRAFT_v1g144035 [Nematostella vectensis] gi|156207863|gb|EDO29582.1| predicted protein [Nematostella vectensis] Length = 287 Score = 36.3 bits (82), Expect = 4.6, Method: Composition-based stats. Identities = 15/166 (9%), Positives = 37/166 (22%) Query: 47 FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 ++ Y + Y + Y + + +A + Sbjct: 39 LHMYRAHYYRLHMYRAHYYRLHMYRAHYYTLHMYRAHYYRLHMYRAHYYRLHMYRAHYYR 98 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 + + Y + + R R ++ Y + Y Sbjct: 99 LHMYRAHYYRLHMYCAHYYRLHMYRAHYYRLHMYRAHYYRLHMYRAHYYRLHMYRAHYYR 158 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYA 212 + + L + ++ +M H Y+ Y A Sbjct: 159 LHMCRAHYYRLHMYRAHYYRLHMYRAHYYTLHMYRAHYYTLHMYRA 204 Score = 36.3 bits (82), Expect = 5.0, Method: Composition-based stats. Identities = 16/166 (9%), Positives = 38/166 (22%) Query: 47 FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 ++ Y + Y + Y + + +A + Sbjct: 29 LHMYRAHYYRLHMYRAHYYRLHMYRAHYYRLHMYRAHYYTLHMYRAHYYRLHMYRAHYYR 88 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 + + Y + + R R ++ Y + Y Sbjct: 89 LHMYRAHYYRLHMYRAHYYRLHMYCAHYYRLHMYRAHYYRLHMYRAHYYRLHMYRAHYYR 148 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYA 212 + + L + ++ +M R H Y+ Y A Sbjct: 149 LHMYRAHYYRLHMCRAHYYRLHMYRAHYYRLHMYRAHYYTLHMYRA 194 Score = 36.3 bits (82), Expect = 5.5, Method: Composition-based stats. Identities = 14/161 (8%), Positives = 36/161 (22%), Gaps = 1/161 (0%) Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 +Y+ + Y + + + + L + R+ Sbjct: 64 AHYYTLHMYRAHYYRLHMYRAHYYRLHMYRAHYYRLHMYRAHYYRLHMYCAHYYRLHMYR 123 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII-PQPHDCYNPIIWEN 171 + + ++ + L + Y + Sbjct: 124 AHYYRLHMYRAHYYRLHMYRAHYYRLHMYRAHYYRLHMCRAHYYRLHMYRAHYYRLHMYR 183 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYA 212 +TL + ++ +M R H Y+ Y A Sbjct: 184 AHYYTLHMYRAHYYTLHMYRAHYYRLHMYRAHYYTLHMYRA 224 Score = 35.9 bits (81), Expect = 6.1, Method: Composition-based stats. Identities = 15/166 (9%), Positives = 36/166 (21%) Query: 47 FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 ++ Y + Y + Y + + +A + Sbjct: 79 LHMYRAHYYRLHMYRAHYYRLHMYRAHYYRLHMYCAHYYRLHMYRAHYYRLHMYRAHYYR 138 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 + + Y + R R ++ Y + Y Sbjct: 139 LHMYRAHYYRLHMYRAHYYRLHMCRAHYYRLHMYRAHYYRLHMYRAHYYTLHMYRAHYYT 198 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYA 212 + + L + ++ +M H Y+ Y A Sbjct: 199 LHMYRAHYYRLHMYRAHYYTLHMYRAHYYTLHMYGAHYYTLHMYRA 244 >gi|298713638|emb|CBJ33686.1| n/a [Ectocarpus siliculosus] Length = 1023 Score = 36.3 bits (82), Expect = 4.6, Method: Composition-based stats. Identities = 9/163 (5%), Positives = 22/163 (13%), Gaps = 6/163 (3%) Query: 52 SLNYHIETCGQKSYNGVAILSKYQPI-EIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 ++ + + G + N + Sbjct: 735 YAGPYVCWWHYTGPYRRSWWRPWYADPYDDRRNAGPYVCWWYYAGPYVCRWNYAGPYVCR 794 Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH---DCYNPI 167 W + + H Sbjct: 795 WNYADPYDDRRNAGPYVCWWYYAGPYVCRWYYAGPYVCRWYYAGPYVCWWHYTGPYRRSW 854 Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY--SFW 208 A + R + + + Y S+W Sbjct: 855 WRPWYADPYDDRRDAGPYVCRWYYAGPYVCWWHYTGPYRRSWW 897 Score = 36.3 bits (82), Expect = 4.7, Method: Composition-based stats. Identities = 7/173 (4%), Positives = 24/173 (13%), Gaps = 16/173 (9%) Query: 52 SLNYHIETCGQKSYNGVAILSKYQPI-EIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 ++ + + G + + Sbjct: 683 YAGPYVCWWHYTGPCRRSWWRPWYADPYDDRRNAGPYVCWWYYAGPYVCRWYYAGPYVCW 742 Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170 + + + + R P ++ Sbjct: 743 WHYTGPYRRSWWRPWYADPYDDRRNAGPYVCWWYYAGPYVCRWNYAGPYVCRWNYADPYD 802 Query: 171 NDACFTLEVRQSFQ-------------KLQNMGFTDAIRATHDTHHLY--SFW 208 + V + + + Y S+W Sbjct: 803 DRRNAGPYVCWWYYAGPYVCRWYYAGPYVCRWYYAGPYVCWWHYTGPYRRSWW 855 Score = 35.1 bits (79), Expect = 9.7, Method: Composition-based stats. Identities = 13/172 (7%), Positives = 20/172 (11%), Gaps = 5/172 (2%) Query: 47 FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 + + + V P + G + N Sbjct: 751 RSWWRPWYADPYDDRRNAGPYVCWWYYAGPYVCRWNYAGPYVCRWNYADPYDDRRNAGPY 810 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 Y W + + P Sbjct: 811 VCWWYYAGPYVCRWYYAGPYVCRWYYAGPYVCWWHYTGPYRRSWWRPWYADPYDDRRDAG 870 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH-----HLYSFWDYYAD 213 V Y W YYA Sbjct: 871 PYVCRWYYAGPYVCWWHYTGPYRRSWWRAWYADPYDDRRNAGPYVCWWYYAG 922 >gi|226289942|gb|EEH45426.1| glucose-repressible alcohol dehydrogenase transcriptional effector [Paracoccidioides brasiliensis Pb18] Length = 771 Score = 36.3 bits (82), Expect = 4.6, Method: Composition-based stats. Identities = 11/22 (50%), Positives = 12/22 (54%) Query: 17 RIHNLAAWIKENNPDIICLQET 38 R L IK N DI+CLQE Sbjct: 417 RRDLLLNEIKGYNADIVCLQEI 438 >gi|295661161|ref|XP_002791136.1| glucose-repressible alcohol dehydrogenase transcriptional effector [Paracoccidioides brasiliensis Pb01] gi|226281063|gb|EEH36629.1| glucose-repressible alcohol dehydrogenase transcriptional effector [Paracoccidioides brasiliensis Pb01] Length = 769 Score = 36.3 bits (82), Expect = 4.6, Method: Composition-based stats. Identities = 11/22 (50%), Positives = 12/22 (54%) Query: 17 RIHNLAAWIKENNPDIICLQET 38 R L IK N DI+CLQE Sbjct: 417 RRDLLLNEIKGYNADIVCLQEI 438 >gi|225682536|gb|EEH20820.1| glucose-repressible alcohol dehydrogenase transcriptional effector [Paracoccidioides brasiliensis Pb03] Length = 607 Score = 36.3 bits (82), Expect = 4.6, Method: Composition-based stats. Identities = 11/22 (50%), Positives = 12/22 (54%) Query: 17 RIHNLAAWIKENNPDIICLQET 38 R L IK N DI+CLQE Sbjct: 253 RRDLLLNEIKGYNADIVCLQEI 274 >gi|156349174|ref|XP_001621948.1| hypothetical protein NEMVEDRAFT_v1g143109 [Nematostella vectensis] gi|156208312|gb|EDO29848.1| predicted protein [Nematostella vectensis] Length = 388 Score = 36.3 bits (82), Expect = 4.6, Method: Composition-based stats. Identities = 7/170 (4%), Positives = 28/170 (16%), Gaps = 4/170 (2%) Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + + + ++ + + + + Sbjct: 30 WWACWRRNCWTRGTWWACWRWNSWTRGTWWACWRWNSWTRGTWWACWRRNSWTRGNWWAC 89 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLEL----EEPLIFAGDYNIIPQPHDCYNPIIWEN 171 + T+ W + + + + N Sbjct: 90 WRWNSWTRSTWWACWRWNCWTRGTWWACWRRNSWTRSTWWACWRGNSWTRGTWWACWRRN 149 Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI 221 G A + + + +SW++ Sbjct: 150 SWTRGTWWACWRWNSWTRGTWWACWKWNSWTRGTWWACWRRNSWTRGTWW 199 >gi|147820051|emb|CAN60555.1| hypothetical protein VITISV_013544 [Vitis vinifera] Length = 269 Score = 36.3 bits (82), Expect = 4.6, Method: Composition-based stats. Identities = 10/62 (16%), Positives = 23/62 (37%), Gaps = 11/62 (17%) Query: 201 THHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKP-SDHTPVI 258 ++++ N+ R+D +++P R +P SDH P++ Sbjct: 138 QGGVFTW-----SGGLNNQSWARLDRFLVTPSXLDXFSGVI----QRRLPRPVSDHFPIL 188 Query: 259 VS 260 + Sbjct: 189 LE 190 >gi|317032663|ref|XP_001394168.2| sphingomyelinase family protein [Aspergillus niger CBS 513.88] Length = 461 Score = 36.3 bits (82), Expect = 4.7, Method: Composition-based stats. Identities = 37/327 (11%), Positives = 70/327 (21%), Gaps = 49/327 (14%) Query: 4 VTVATWNVNSIR-------ARIHNLAAWIKENNP--DIICLQETKTEDK-----NFPFET 49 + + T N ++ AR+ + + +P +I+ LQE T+ Sbjct: 18 IRIFTLNCWGLKYIAKHRHARLAEIGRQLAIASPPPEIVGLQECWTQQDYESIRQQTRHI 77 Query: 50 LQSLNYHIETCG---------QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT 100 L ++ + F Sbjct: 78 LPYGKFYFGGIWGAGLAILSKWPIEESSMFAYPLNGRPTAFFRGDWYVGKGVACARVRFG 137 Query: 101 INTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP 160 Q + H + A E Sbjct: 138 PGVQDVAEVFCTHLHAPYEREPNDSYICHRTAQAWEIAKLMRGAAERGHLVIGLGDFNML 197 Query: 161 HDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY-SF-WDYYADSW--- 215 + + V Q K + + ++ W Sbjct: 198 PSSFVLHPDSSVGAAIDPVEQKRGKPIPSAEYNITENGATCDGKFNTWRWSKEDQKRLEK 257 Query: 216 ------SKN----KGIRIDHIMLS--------PEATSLLHS---ARIDTKPRGWTKPSDH 254 K+ KG R+D+I + P + S + + P SDH Sbjct: 258 GQDIVVDKDAPCPKGKRLDYIFVGDGNYPPLYPAPRWSVESTRLSMTERHPTLRCSLSDH 317 Query: 255 TPVIVSLDIPEPRKKQQDSTSQNMKPI 281 V + K D+T + P+ Sbjct: 318 FAVEAVITRVPSEKVDNDTTISHQSPV 344 >gi|47230227|emb|CAG10641.1| unnamed protein product [Tetraodon nigroviridis] Length = 422 Score = 36.3 bits (82), Expect = 4.7, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 25/62 (40%), Gaps = 5/62 (8%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNF---PFETLQSLNYHIETCGQKSYNGVAILSK 73 R + I++ PDI+CLQE ++ +F + L L Y + + Sbjct: 34 RCRRILLEIQKWAPDILCLQEV--QENHFYQHVYPVLSQLGYSCAYKRRTGNKTDGCATC 91 Query: 74 YQ 75 Y+ Sbjct: 92 YR 93 >gi|147788698|emb|CAN69754.1| hypothetical protein VITISV_024938 [Vitis vinifera] Length = 971 Score = 36.3 bits (82), Expect = 4.8, Method: Composition-based stats. Identities = 10/61 (16%), Positives = 21/61 (34%), Gaps = 9/61 (14%) Query: 201 THHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 ++++ N+ R+D +++ S + R SDH PV + Sbjct: 19 QGGVFTW-----SGGPNNQSWARLDRFLVNTSWLDQFSSVL---QSRLPRPLSDHFPVSL 70 Query: 260 S 260 Sbjct: 71 E 71 >gi|260770527|ref|ZP_05879460.1| hypothetical protein VFA_003594 [Vibrio furnissii CIP 102972] gi|260615865|gb|EEX41051.1| hypothetical protein VFA_003594 [Vibrio furnissii CIP 102972] Length = 264 Score = 36.3 bits (82), Expect = 4.8, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 17/47 (36%), Gaps = 11/47 (23%) Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263 IDHI++SP + S + SDH P+ L Sbjct: 223 IDHIIISPTLKASATQQVNFESQDVLRYAL-----SDHCPLRSELQW 264 >gi|156386176|ref|XP_001633789.1| predicted protein [Nematostella vectensis] gi|156220864|gb|EDO41726.1| predicted protein [Nematostella vectensis] Length = 111 Score = 36.3 bits (82), Expect = 4.8, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 28/73 (38%), Gaps = 8/73 (10%) Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 + L N H H ++ D + N+ IDHI+++ + L + R+ Sbjct: 34 ADFCLNNDLVNGGTIFPHKNIHKLTWMS--PDGRTLNQ---IDHIIINGKWRRSLLNVRV 88 Query: 242 DTKPRGWTKPSDH 254 RG SDH Sbjct: 89 Y---RGDDASSDH 98 >gi|291536503|emb|CBL09615.1| 4-alpha-glucanotransferase [Roseburia intestinalis M50/1] Length = 513 Score = 36.3 bits (82), Expect = 4.8, Method: Composition-based stats. Identities = 20/171 (11%), Positives = 44/171 (25%), Gaps = 3/171 (1%) Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 + + + + ++ + T + R+ Sbjct: 125 FAAFCKDEAEWLDEYALFMALKDANGGVAWYEWEKDLKTRKTEALKEA--RVTYAEDIAF 182 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + + + +K ++ + + P+ AGD + + N Sbjct: 183 YKMLQYLFFKQWWDLKAYVNDLGIEIIGDVPIYVAGDSADVWADPGQFYLDEELNPIDVA 242 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI-RIDHI 226 +F + R YS+W + SK I RIDH Sbjct: 243 GCPPDAFSADGQLWGNPLFRWDAMKKDGYSWWTKRVKAMSKLYDIVRIDHF 293 >gi|242095430|ref|XP_002438205.1| hypothetical protein SORBIDRAFT_10g009570 [Sorghum bicolor] gi|241916428|gb|EER89572.1| hypothetical protein SORBIDRAFT_10g009570 [Sorghum bicolor] Length = 468 Score = 36.3 bits (82), Expect = 4.8, Method: Composition-based stats. Identities = 10/54 (18%), Positives = 18/54 (33%), Gaps = 7/54 (12%) Query: 224 DHIMLSPEAT-SLLHS---ARIDTKPRG---WTKPSDHTPVIVSLDIPEPRKKQ 270 D++ + S + + + RG SDH P++ PE Sbjct: 382 DYLWHTRGIECSRVLDTLPIGVLRRTRGLPTREIGSDHLPIVAEFSFPESVDDS 435 >gi|260589359|ref|ZP_05855272.1| beta-galactosidase [Blautia hansenii DSM 20583] gi|260540440|gb|EEX21009.1| beta-galactosidase [Blautia hansenii DSM 20583] Length = 1807 Score = 36.3 bits (82), Expect = 4.8, Method: Composition-based stats. Identities = 14/194 (7%), Positives = 41/194 (21%), Gaps = 10/194 (5%) Query: 38 TKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA 97 TK P E +N+ I+ N + + + E Sbjct: 1540 TKATLTAVPKEGFAFVNWTIDGQEVSKENPYIHTVETDATITANFERIEVENEGWVQTEN 1599 Query: 98 TFTINTQTLRIGNLYLPHGNPI----------TSTKYDDKISWIKRFLRFASQRLELEEP 147 + ++ G ++ ++ ++ + ++ Sbjct: 1600 GWEYYENGQKVVGWKEVSGKWYYFEENGLMQTGWVFVNNHWYYMDQWGAMCIGWVAVDGH 1659 Query: 148 LIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF 207 + + + N + D ++ + + Sbjct: 1660 WYYMDQWGAMCTGWVSVNGHWYHMDQWGAMQTGWALVDSNWYYLNTDGSMAIGWVAVNGH 1719 Query: 208 WDYYADSWSKNKGI 221 W Y + G Sbjct: 1720 WYYMDQWGAMQTGW 1733 >gi|156367134|ref|XP_001627274.1| predicted protein [Nematostella vectensis] gi|156214179|gb|EDO35174.1| predicted protein [Nematostella vectensis] Length = 302 Score = 36.3 bits (82), Expect = 4.8, Method: Composition-based stats. Identities = 15/166 (9%), Positives = 38/166 (22%) Query: 47 FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106 + Y + Y + Y +++ A + Sbjct: 39 LHMYCAHYYRLHMYCAHYYRLHMYCAHYYRLDMYCAHYYRLDMYCAHYYRLHMYCAHYYR 98 Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166 + + Y + + R ++ Y + Y Sbjct: 99 LHMYCAHYYRLHMYRAHYYRLHMYRAHYYRLDMYCAHYYRLHMYRAHYYTLHMYFAHYYT 158 Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYA 212 + + + L + ++ +M R + H Y+ Y A Sbjct: 159 LHMYSAHYYRLHMYRAHYHRLHMYRVHYYRLHMNCAHCYTLHMYRA 204 >gi|302814905|ref|XP_002989135.1| hypothetical protein SELMODRAFT_427753 [Selaginella moellendorffii] gi|300143035|gb|EFJ09729.1| hypothetical protein SELMODRAFT_427753 [Selaginella moellendorffii] Length = 570 Score = 36.3 bits (82), Expect = 4.9, Method: Composition-based stats. Identities = 17/114 (14%), Positives = 38/114 (33%), Gaps = 7/114 (6%) Query: 148 LIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF 207 + GD+N + + D + + + + T I +++ Sbjct: 360 WMVTGDFNFVEEVLDKDGGEMRDKRTSRERAMWAQLVLALGLEDTYNIPGFVQHQPRFTW 419 Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 ++ + R+D +SPE ++ G+ SDH V ++L Sbjct: 420 QEHQQRGIQR----RLDRFYVSPEL---CRNSGKLDITTGYRDFSDHNSVSLTL 466 >gi|282897774|ref|ZP_06305773.1| hypothetical protein CRD_01893 [Raphidiopsis brookii D9] gi|281197453|gb|EFA72350.1| hypothetical protein CRD_01893 [Raphidiopsis brookii D9] Length = 257 Score = 36.3 bits (82), Expect = 4.9, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 24/74 (32%), Gaps = 7/74 (9%) Query: 188 NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRG 247 + + +F D+ +W D I ++ ID + Sbjct: 185 DNYRIRDVLGNLPLESQKTFHDFTGQAWDAR-----DTIYCDHRW--QINHVIIDDQRWE 237 Query: 248 WTKPSDHTPVIVSL 261 PSDH PVIV L Sbjct: 238 GIWPSDHFPVIVKL 251 >gi|222637117|gb|EEE67249.1| hypothetical protein OsJ_24400 [Oryza sativa Japonica Group] Length = 253 Score = 36.3 bits (82), Expect = 4.9, Method: Composition-based stats. Identities = 10/37 (27%), Positives = 20/37 (54%), Gaps = 5/37 (13%) Query: 7 ATWNVNS-----IRARIHNLAAWIKENNPDIICLQET 38 T+NV S + R+ + + ++++ PD+I QE Sbjct: 1 MTYNVWSREDVAVYKRMKAIGSLVEKHKPDVIFFQEI 37 >gi|212536828|ref|XP_002148570.1| reverse transcriptase, putative [Penicillium marneffei ATCC 18224] gi|210070969|gb|EEA25059.1| reverse transcriptase, putative [Penicillium marneffei ATCC 18224] Length = 1262 Score = 36.3 bits (82), Expect = 4.9, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 21/57 (36%), Gaps = 5/57 (8%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKP-SDHTPVIVSLDIPEPRKKQQDSTSQNM 278 ID LS ++ L I + + SDH P+ +DI P + + Sbjct: 179 IDLTFLSSSLSNRL----ILVERADAIQHDSDHWPIRTQIDIQTPVNEPPKRRNWAA 231 >gi|328472297|gb|EGF43167.1| extracellular nuclease-like protein [Vibrio parahaemolyticus 10329] Length = 984 Score = 36.3 bits (82), Expect = 4.9, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 24/63 (38%), Gaps = 20/63 (31%) Query: 223 IDHIMLSPEATSLLHSAR---ID-----------------TKPRGWTKPSDHTPVIVSLD 262 +DH + S + + I+ K + SDH PVI+++D Sbjct: 785 LDHALASNSLAQKVVAIEDWHINSLESNLFEYGSKYTGDMPKYKDAFSASDHDPVIIAID 844 Query: 263 IPE 265 +P+ Sbjct: 845 LPD 847 >gi|260900883|ref|ZP_05909278.1| endonuclease/exonuclease/phosphatase family protein [Vibrio parahaemolyticus AQ4037] gi|308106508|gb|EFO44048.1| endonuclease/exonuclease/phosphatase family protein [Vibrio parahaemolyticus AQ4037] Length = 984 Score = 36.3 bits (82), Expect = 4.9, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 24/63 (38%), Gaps = 20/63 (31%) Query: 223 IDHIMLSPEATSLLHSAR---ID-----------------TKPRGWTKPSDHTPVIVSLD 262 +DH + S + + I+ K + SDH PVI+++D Sbjct: 785 LDHALASNSLAQKVVAIEDWHINSLESNLFEYGSKYTGDMPKYKDAFSASDHDPVIIAID 844 Query: 263 IPE 265 +P+ Sbjct: 845 LPD 847 >gi|260786407|ref|XP_002588249.1| hypothetical protein BRAFLDRAFT_86696 [Branchiostoma floridae] gi|229273409|gb|EEN44260.1| hypothetical protein BRAFLDRAFT_86696 [Branchiostoma floridae] Length = 754 Score = 36.3 bits (82), Expect = 4.9, Method: Composition-based stats. Identities = 10/39 (25%), Positives = 19/39 (48%), Gaps = 2/39 (5%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 IDHI++ ++ S ++ SDH+P++ S Sbjct: 609 IDHILIPYSLSTEAVSCKVIGDC--SLNLSDHSPIVASF 645 >gi|153839526|ref|ZP_01992193.1| nuclease [Vibrio parahaemolyticus AQ3810] gi|149746952|gb|EDM57940.1| nuclease [Vibrio parahaemolyticus AQ3810] Length = 632 Score = 36.3 bits (82), Expect = 4.9, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 24/63 (38%), Gaps = 20/63 (31%) Query: 223 IDHIMLSPEATSLLHSAR---ID-----------------TKPRGWTKPSDHTPVIVSLD 262 +DH + S + + I+ K + SDH PVI+++D Sbjct: 433 LDHALASNSLAQKVVAIEDWHINSLESNLFEYGSKYTGDMPKYKDAFSASDHDPVIIAID 492 Query: 263 IPE 265 +P+ Sbjct: 493 LPD 495 >gi|28899573|ref|NP_799178.1| extracellular nuclease-like protein [Vibrio parahaemolyticus RIMD 2210633] gi|260361411|ref|ZP_05774473.1| endonuclease/exonuclease/phosphatase family protein [Vibrio parahaemolyticus K5030] gi|260876683|ref|ZP_05889038.1| nuclease [Vibrio parahaemolyticus AN-5034] gi|28807809|dbj|BAC61062.1| extracellular nuclease-related protein [Vibrio parahaemolyticus RIMD 2210633] gi|308093950|gb|EFO43645.1| nuclease [Vibrio parahaemolyticus AN-5034] gi|308112902|gb|EFO50442.1| endonuclease/exonuclease/phosphatase family protein [Vibrio parahaemolyticus K5030] Length = 984 Score = 36.3 bits (82), Expect = 4.9, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 24/63 (38%), Gaps = 20/63 (31%) Query: 223 IDHIMLSPEATSLLHSAR---ID-----------------TKPRGWTKPSDHTPVIVSLD 262 +DH + S + + I+ K + SDH PVI+++D Sbjct: 785 LDHALASNSLAQKVVAIEDWHINSLESNLFEYGSKYTGDMPKYKDAFSASDHDPVIIAID 844 Query: 263 IPE 265 +P+ Sbjct: 845 LPD 847 >gi|260592150|ref|ZP_05857608.1| oxidoreductase, Gfo/Idh/MocA family [Prevotella veroralis F0319] gi|260535784|gb|EEX18401.1| oxidoreductase, Gfo/Idh/MocA family [Prevotella veroralis F0319] Length = 515 Score = 36.3 bits (82), Expect = 5.0, Method: Composition-based stats. Identities = 18/198 (9%), Positives = 48/198 (24%), Gaps = 9/198 (4%) Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 G+ +++ + L + ++ + Sbjct: 76 AVERWTHIPGIQVMALCDFEKDRAERCQQYLRKASMPAADIYSGEDGYKELCKRKDIDLV 135 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 I + + +E+ + + + +I + + C+ Sbjct: 136 YIAPDWKHHFLVAKEAMTHGKHVAIEVPAAMNMSEIWQLIELSEKNRLHCMMLENCCYDF 195 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYS-FWD-YYADSWSKNKGIRIDH-------IML 228 S Q F + + H + FW+ Y+ G R+D+ + Sbjct: 196 FELNSLNMAQKGIFGEILYVQGAYRHDLTPFWNAYWKKDKEDKLGWRLDYNQKFRGDVYA 255 Query: 229 SPEATSLLHSARIDTKPR 246 + + I R Sbjct: 256 THGLGPIAQVLDIHRGDR 273 >gi|260814894|ref|XP_002602148.1| hypothetical protein BRAFLDRAFT_234265 [Branchiostoma floridae] gi|229287455|gb|EEN58160.1| hypothetical protein BRAFLDRAFT_234265 [Branchiostoma floridae] Length = 215 Score = 36.3 bits (82), Expect = 5.0, Method: Composition-based stats. Identities = 8/141 (5%), Positives = 19/141 (13%) Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 I + I + F + T + Sbjct: 5 IYWWWWIFTCLHWCWGIFTCIHWWWWIFTCLHWCWGIFTCIHWWWWIFTCLHWCWGIFTC 64 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + F G + I + + W Sbjct: 65 IHWWWWIFTCLHWCWGIFTCIHWWWWIFTCLHWCWGIFTCIHWWWWIFTCLHWCWGIFTC 124 Query: 177 LEVRQSFQKLQNMGFTDAIRA 197 + + + Sbjct: 125 IHWWWWIFTCLHWCSRGDLHM 145 >gi|169625455|ref|XP_001806131.1| hypothetical protein SNOG_16000 [Phaeosphaeria nodorum SN15] gi|160705657|gb|EAT76579.2| hypothetical protein SNOG_16000 [Phaeosphaeria nodorum SN15] Length = 890 Score = 36.3 bits (82), Expect = 5.0, Method: Composition-based stats. Identities = 22/185 (11%), Positives = 42/185 (22%), Gaps = 17/185 (9%) Query: 85 GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL 144 + + L + I + Sbjct: 15 FCIHKTLKNYTIIQAQGKNRGLLVTLFLTTEHGNIAIHNL-YNYERAADIDELIEACRDK 73 Query: 145 EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL 204 I GD+N+ + + E QK +G T + Sbjct: 74 TYAHIIIGDFNLRHKDWEGPTCRN------PHPEANTLVQKAGAIGMT-----CVNKPGH 122 Query: 205 YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264 +++ + ID +S SDH P+ V+LD+ Sbjct: 123 FTYSRGEFKTPGNEYKSVIDLAFVSTLLVGHAS-----HDVLDGVFDSDHRPIRVTLDLR 177 Query: 265 EPRKK 269 R++ Sbjct: 178 VERRR 182 >gi|308453155|ref|XP_003089323.1| CRE-LAM-1 protein [Caenorhabditis remanei] gi|308241157|gb|EFO85109.1| CRE-LAM-1 protein [Caenorhabditis remanei] Length = 1264 Score = 36.3 bits (82), Expect = 5.0, Method: Composition-based stats. Identities = 15/167 (8%), Positives = 29/167 (17%), Gaps = 5/167 (2%) Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 + ++ V + Q E +L N + + + G Sbjct: 1059 VSGQCPCHDNVIGMQCDQCAENHFNLASGAGCEACGCDPNGVVPNHEGVPHLQCNIFDGQ 1118 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 + L + P Sbjct: 1119 CQCKPGRGGRKCDQCEDLYWGDPTTPDGCH-----RCECNPTGSKSLQCHRNNGTCECQP 1173 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRID 224 + G+T + + WD K ID Sbjct: 1174 GSGGALCNECARGYTGQWPYCNPCGECFHQWDNIMQKLQKQVHALID 1220 >gi|255713110|ref|XP_002552837.1| KLTH0D02574p [Lachancea thermotolerans] gi|238934217|emb|CAR22399.1| KLTH0D02574p [Lachancea thermotolerans] Length = 368 Score = 36.3 bits (82), Expect = 5.0, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 19/51 (37%), Gaps = 11/51 (21%) Query: 224 DHIMLSP---EATSLLHSARIDTKPR--------GWTKPSDHTPVIVSLDI 263 D+I +L A + + R PSDH PV+ L++ Sbjct: 316 DYIWYHDKDFRLKRILSGAEVSQELRELQEFGLPNKDHPSDHIPVLAELEL 366 >gi|218193742|gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indica Group] Length = 1874 Score = 36.3 bits (82), Expect = 5.0, Method: Composition-based stats. Identities = 22/139 (15%), Positives = 46/139 (33%), Gaps = 12/139 (8%) Query: 129 SWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS------ 182 R + + L+++ I D + I N+A + E + Sbjct: 52 CCTWRATFLYGEPRAQDRHLMWSLLRRIRSNSGDPWLMIGDFNEAMWQTEHKSHRKRSES 111 Query: 183 -FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241 + + + + ++F + + N +R+D + SP +S A I Sbjct: 112 QMRDFREVLSECDLHDIGFQGAPWTFCNMQREGR--NVKVRLDRGVASPAWSSRFPQAVI 169 Query: 242 DTKPRGWTKPSDHTPVIVS 260 T SDH P+++ Sbjct: 170 ---THLTTPSSDHAPLLLE 185 >gi|193599016|ref|XP_001948281.1| PREDICTED: inositol polyphosphate 5-phosphatase K-like [Acyrthosiphon pisum] Length = 465 Score = 36.3 bits (82), Expect = 5.1, Method: Composition-based stats. Identities = 37/302 (12%), Positives = 76/302 (25%), Gaps = 52/302 (17%) Query: 7 ATWNVN--SIRARIHNLAAW--IKENN-PDI--ICLQETKTEDKNFPFETLQSL------ 53 T+NV S R + +L W E+ PD QE K + +N +++ Sbjct: 9 VTYNVATRSPRQPLEDLLQWNGRTEHQLPDFCLFGFQEIKAQPQNLLLDSVFDDPWTAAL 68 Query: 54 -----NYHIETCGQKSYNGVAILSKYQPIEIV----------THLPGDDLDVQARFIEAT 98 YH G+ + + + + + Sbjct: 69 RDVLSGYHYVKIRTVKMVGLLLNVFCKRKHVPLLKEMQTSETRTGILGVWGNKGAVSFSF 128 Query: 99 FTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP 158 + + H + D + + + + + + + GD N Sbjct: 129 KIYGATICCVNCHFAAHEEYLKHRINDYHTIIESQHFGSSRKVILDHDYVFWFGDLNFRL 188 Query: 159 QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN 218 + ++ L ++ D + + + + + + Sbjct: 189 DNSKLKSAEEIARHVNNVNLSLRTATTLSDIWAQDELSSVMQKSKAFKGFFEHLPMFPPT 248 Query: 219 KGIRIDHIMLS--------PEATSLLHSARID------------TKPRGWTKPSDHTPVI 258 R +I S P T + ID K + SDH PV Sbjct: 249 Y--R--YIFGSGSYDLKRRPAWTDRILYKTIDSSNEKCVLEVLSYKYIESIRLSDHRPVY 304 Query: 259 VS 260 Sbjct: 305 SE 306 >gi|322502593|emb|CBZ37676.1| unnamed protein product [Leishmania donovani BPK282A1] Length = 832 Score = 36.3 bits (82), Expect = 5.1, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 20/47 (42%), Gaps = 8/47 (17%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWT--------KPSDHTPVIVSL 261 ID+I S ++ +L + I ++ PSDH ++ L Sbjct: 781 IDYIFFSEDSLEVLRTVPIPSEAELTENFALPNKKYPSDHVALVADL 827 >gi|322495024|emb|CBZ30327.1| conserved hypothetical protein [Leishmania mexicana MHOM/GT/2001/U1103] Length = 704 Score = 36.3 bits (82), Expect = 5.1, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 20/47 (42%), Gaps = 8/47 (17%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWT--------KPSDHTPVIVSL 261 ID+I S ++ +L + I ++ PSDH ++ L Sbjct: 653 IDYIFFSEDSLEVLRTVPIPSEAELTENFALPNKKYPSDHVALVADL 699 >gi|321398689|emb|CAM71649.2| conserved hypothetical protein [Leishmania infantum JPCM5] Length = 832 Score = 36.3 bits (82), Expect = 5.1, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 20/47 (42%), Gaps = 8/47 (17%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWT--------KPSDHTPVIVSL 261 ID+I S ++ +L + I ++ PSDH ++ L Sbjct: 781 IDYIFFSEDSLEVLRTVPIPSEAELTENFALPNKKYPSDHVALVADL 827 >gi|146099120|ref|XP_001468563.1| hypothetical protein [Leishmania infantum] Length = 465 Score = 36.3 bits (82), Expect = 5.1, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 20/47 (42%), Gaps = 8/47 (17%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWT--------KPSDHTPVIVSL 261 ID+I S ++ +L + I ++ PSDH ++ L Sbjct: 414 IDYIFFSEDSLEVLRTVPIPSEAELTENFALPNKKYPSDHVALVADL 460 >gi|157875900|ref|XP_001686320.1| hypothetical protein [Leishmania major strain Friedlin] gi|68129394|emb|CAJ07935.1| conserved hypothetical protein [Leishmania major strain Friedlin] Length = 705 Score = 36.3 bits (82), Expect = 5.1, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 20/47 (42%), Gaps = 8/47 (17%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWT--------KPSDHTPVIVSL 261 ID+I S ++ +L + I ++ PSDH ++ L Sbjct: 654 IDYIFFSEDSLEVLRTVPIPSEAELTENFALPNKKYPSDHVALVADL 700 >gi|119173435|ref|XP_001239168.1| hypothetical protein CIMG_10190 [Coccidioides immitis RS] Length = 346 Score = 36.3 bits (82), Expect = 5.2, Method: Composition-based stats. Identities = 36/279 (12%), Positives = 73/279 (26%), Gaps = 44/279 (15%) Query: 6 VATWNVNS------IRARIHNLAAWIKENNP--DIICLQE-TKTEDKNFPFETLQSLNYH 56 + TWN+N IR + I++ P D+I LQE T+T L ++ + Sbjct: 73 LVTWNINGTDLAPDIRTSA--IVTHIRDMRPVMDVIFLQEVTRTT-----LSVLLAMPWV 125 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 E + + I T + R+ Sbjct: 126 REQWYSSEADATSWG----HQSISTMTLLSKSRFHGLKCTPERAALSAVWRVPFPSHFGR 181 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN----- 171 + + + + + + + I P II Sbjct: 182 DALCCDIFLPICTPSECKKSVPGSHARIRLVNVHLDSLAIQPSYRPRQLSIIASYLRAAG 241 Query: 172 ----DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI- 226 F + + + D +++ ++ N R+D + Sbjct: 242 RGLVAGDFNPVLPEDDSLINENNLVDVWTELRPNDPGFTWGIDGKQAYPAN---RLDKVA 298 Query: 227 ----------MLSPEATSLLHSARIDTKPRGWTKPSDHT 255 ++ P + ++A + R K SDH Sbjct: 299 KLGLKTHEIEVIPPGTCTYAYAAENRPEER-EHKWSDHC 336 >gi|282899308|ref|ZP_06307277.1| hypothetical protein CRC_00757 [Cylindrospermopsis raciborskii CS-505] gi|281195765|gb|EFA70693.1| hypothetical protein CRC_00757 [Cylindrospermopsis raciborskii CS-505] Length = 256 Score = 36.3 bits (82), Expect = 5.2, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 23/74 (31%), Gaps = 7/74 (9%) Query: 188 NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRG 247 + +F D+ +W D I ++ ID + Sbjct: 185 DNYRIKDALGNLPVESQKTFHDFTGQAWDPR-----DTIYCDRRW--QINQVIIDDQQWE 237 Query: 248 WTKPSDHTPVIVSL 261 PSDH PVIV L Sbjct: 238 GIWPSDHFPVIVKL 251 >gi|159465185|ref|XP_001690803.1| CCR4-NOT transcription complex, subunit 6-like protein [Chlamydomonas reinhardtii] gi|158279489|gb|EDP05249.1| CCR4-NOT transcription complex, subunit 6-like protein [Chlamydomonas reinhardtii] Length = 369 Score = 36.3 bits (82), Expect = 5.2, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 5/56 (8%) Query: 16 ARIHNLAAWIKENNPDIICLQETKTEDKNFPFE---TLQSLNYHIETCGQKSYNGV 68 +R + I+ + DIICLQE + + F E L + Y ++ + V Sbjct: 28 SRRERILQEIESYSSDIICLQEVEAQV--FAGELQPWLAARGYRGHYLPRQYGDSV 81 >gi|224114253|ref|XP_002332412.1| predicted protein [Populus trichocarpa] gi|222832345|gb|EEE70822.1| predicted protein [Populus trichocarpa] Length = 349 Score = 36.3 bits (82), Expect = 5.3, Method: Composition-based stats. Identities = 35/261 (13%), Positives = 78/261 (29%), Gaps = 34/261 (13%) Query: 4 VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + WN+ + I + L I + + L ET+ +DKN Sbjct: 1 MIIGCWNIRGLNDPIKHSELRRLIHQERIALFGLVETRVKDKNKD-----------NVSQ 49 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 + + + + + V+ + ++ I + I Sbjct: 50 LLLRSWSFLYNYDFSCRGRIWVCWNADTVKVDVFGMSDQAIHVSVTILATNISFNTSIIY 109 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + + + P I GD+N I D L+ Sbjct: 110 GDNNASLREALWSDIVSRSDGWESTPWILMGDFNAIRNQSDKLGGSTTWAGTMHRLDTCI 169 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR-IDHIMLSP--EATSLLHS 238 K+ ++ ++ Y++ ++ +N +R +D ++++ L Sbjct: 170 REAKVDDLWYSGMH---------YTW----SNQCPENLIMRKLDRVLVNEKWNLNFPLSE 216 Query: 239 ARIDTKPRGWTKPSDHTPVIV 259 AR SDH+P++V Sbjct: 217 ARFLPSGM-----SDHSPMVV 232 >gi|169620580|ref|XP_001803701.1| hypothetical protein SNOG_13492 [Phaeosphaeria nodorum SN15] gi|111057819|gb|EAT78939.1| hypothetical protein SNOG_13492 [Phaeosphaeria nodorum SN15] Length = 358 Score = 36.3 bits (82), Expect = 5.3, Method: Composition-based stats. Identities = 23/182 (12%), Positives = 44/182 (24%), Gaps = 2/182 (1%) Query: 37 ETKTE--DKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARF 94 ETK + DK L + + S + + + S + D+ Q Sbjct: 85 ETKLKVVDKQIKILMNNYLKMFYQEYRKHSRDELRMWSFPTIVWQHYQKMFCDVTRQRPD 144 Query: 95 IEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDY 154 E + + G+ + I K F++ + E + G Sbjct: 145 FELDECFDNGNVVPGSKWNGWVKGQVDAFPPSLIIHGKEAKSFSTSQGSECEMHMVNGHG 204 Query: 155 NIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADS 214 ++ + + FT R YS Y + Sbjct: 205 QLVQTIYHVHCGPKLCGTRVDGGPEIVCKHPGHAHQFTKRPREWDPQKGWYSGNPYRYNH 264 Query: 215 WS 216 Sbjct: 265 RP 266 >gi|77556102|gb|ABA98898.1| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 1188 Score = 36.3 bits (82), Expect = 5.3, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 25/58 (43%), Gaps = 9/58 (15%) Query: 204 LYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI--DTKPRGWTKPSDHTPVIV 259 Y++ D + N +R+D + + + +AR+ T R SDH P+ V Sbjct: 63 PYTY-DNRREGR-NNIRVRLDRALADNDWREMFGNARVSHLTSTR-----SDHCPISV 113 >gi|291538629|emb|CBL11740.1| 4-alpha-glucanotransferase [Roseburia intestinalis XB6B4] Length = 513 Score = 36.3 bits (82), Expect = 5.4, Method: Composition-based stats. Identities = 20/171 (11%), Positives = 44/171 (25%), Gaps = 3/171 (1%) Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 + + + + ++ + T + R+ Sbjct: 125 FAAFCKDEAEWLDEYALFMALKDANGGVAWFEWEKDLKTRKTEALKEA--RVTYAEDIAF 182 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + + + +K ++ + + P+ AGD + + N Sbjct: 183 YKMLQYLFFKQWWDLKAYVNDLGIEIIGDVPIYVAGDSADVWADPGQFYLDKELNPIDVA 242 Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI-RIDHI 226 +F + R YS+W + SK I RIDH Sbjct: 243 GCPPDAFSADGQLWGNPLFRWDAMKKDGYSWWTKRVKAMSKLYDIVRIDHF 293 >gi|147853273|emb|CAN80672.1| hypothetical protein VITISV_002979 [Vitis vinifera] Length = 1102 Score = 36.3 bits (82), Expect = 5.4, Method: Composition-based stats. Identities = 8/39 (20%), Positives = 16/39 (41%), Gaps = 3/39 (7%) Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 R+D ++S + A + SDH P+++ Sbjct: 776 RLDRFLVSEDWEGYFSGAI---QSLLPRIVSDHCPILLD 811 >gi|147794028|emb|CAN60110.1| hypothetical protein VITISV_023618 [Vitis vinifera] Length = 867 Score = 36.3 bits (82), Expect = 5.4, Method: Composition-based stats. Identities = 16/155 (10%), Positives = 35/155 (22%), Gaps = 8/155 (5%) Query: 4 VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTED--KNFPFET----LQSLNY 55 + + +WN ++ + A I+ D+ LQETK + + Sbjct: 3 LRLLSWNARGTNDSSKRKVIKAMIRIQRVDLFGLQETKIQAMTEGLVRSLGIGRFLDWGT 62 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 ++ + +V E + I + Sbjct: 63 LDAHGSTGGNFSISCRLRNVEDXLVWMFXXVYGPFSREEREWMWEEIGXIRGIWDDPWCL 122 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIF 150 G + + L + L Sbjct: 123 GGDFNGVCLHGSGXRNNQAWAKLDRFLVTQSWLDH 157 >gi|260896624|ref|ZP_05905120.1| nuclease [Vibrio parahaemolyticus Peru-466] gi|308086332|gb|EFO36027.1| nuclease [Vibrio parahaemolyticus Peru-466] Length = 984 Score = 36.3 bits (82), Expect = 5.4, Method: Composition-based stats. Identities = 12/63 (19%), Positives = 24/63 (38%), Gaps = 20/63 (31%) Query: 223 IDHIMLSPEATSLLHSAR---ID-----------------TKPRGWTKPSDHTPVIVSLD 262 +D+ + S + + I+ K + SDH PVI+++D Sbjct: 785 LDYALASNSLAQKVVAIEDWHINSLESNLFEYGSKYTGDMPKYKDAFSASDHDPVIIAID 844 Query: 263 IPE 265 +P+ Sbjct: 845 LPD 847 >gi|147844361|emb|CAN80026.1| hypothetical protein VITISV_004059 [Vitis vinifera] Length = 1114 Score = 36.3 bits (82), Expect = 5.4, Method: Composition-based stats. Identities = 9/58 (15%), Positives = 20/58 (34%), Gaps = 7/58 (12%) Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 +++ R+D +++ E S A + SDH P+++ Sbjct: 726 GPFTW----TGGADNQSFSRLDRFLVNEEWDSHFGDA---RQFLLPRPVSDHFPILMD 776 >gi|147766078|emb|CAN76931.1| hypothetical protein VITISV_023947 [Vitis vinifera] Length = 916 Score = 36.3 bits (82), Expect = 5.4, Method: Composition-based stats. Identities = 12/126 (9%), Positives = 37/126 (29%), Gaps = 7/126 (5%) Query: 134 FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTD 193 + EE G ++ +N + + + + + ++ + Sbjct: 29 PCNRKDKEAMWEELGAIRGIWDEPWCLGGDFNVTLSQRERSRQGSLNGAMRRFAQVVDDL 88 Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253 + +S+ + + R+D +++ + R SD Sbjct: 89 DLIDLPLQGGAFSW----SGGRNNQTWARLDRFLVTQSWLDFFRGVV---QCRLPXXTSD 141 Query: 254 HTPVIV 259 H P+++ Sbjct: 142 HFPILL 147 >gi|254415356|ref|ZP_05029117.1| endonuclease/exonuclease/phosphatase family [Microcoleus chthonoplastes PCC 7420] gi|196177831|gb|EDX72834.1| endonuclease/exonuclease/phosphatase family [Microcoleus chthonoplastes PCC 7420] Length = 334 Score = 36.3 bits (82), Expect = 5.6, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 7/43 (16%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265 +DH ++SPE + G SDH P+IV L I + Sbjct: 293 LDHCLISPEI-------NVLAIRTGGDIGSDHRPLIVDLVISD 328 >gi|170592777|ref|XP_001901141.1| hypothetical protein Bm1_48395 [Brugia malayi] gi|158591208|gb|EDP29821.1| hypothetical protein Bm1_48395 [Brugia malayi] Length = 858 Score = 36.3 bits (82), Expect = 5.6, Method: Composition-based stats. Identities = 23/217 (10%), Positives = 53/217 (24%), Gaps = 22/217 (10%) Query: 20 NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEI 79 + + NPD++ L L+ ++ + V + Sbjct: 259 HFVEKLAAENPDVLAL--------------FPPLDTLVKRLTKHREYKVYRRRFEYEKIM 304 Query: 80 VTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFAS 139 G + ++ I + T+++ + + R A+ Sbjct: 305 AERRRGLHSKDCTPGMLRRMRPFPPSVCIECGISIVTDADTTSQENFVDHVSQDHQREAT 364 Query: 140 QRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG-FTDAIRAT 198 + + + Q Y + + + + Sbjct: 365 CQYYSFPGVHLFEQWMRELQQRSRYKIRRFSMHNESLFFLCAADDRWCRTYGVNSDGLHC 424 Query: 199 HDTHHLYSFWDYYADSWSKNKGIRI----DHIMLSPE 231 +Y DY S + + +RI DH S E Sbjct: 425 TAFVRVY---DYRRVSRQETRVLRIQYCLDHNFHSDE 458 >gi|54308439|ref|YP_129459.1| hypothetical protein PBPRA1246 [Photobacterium profundum SS9] gi|46912868|emb|CAG19657.1| Hypothetical protein PBPRA1246 [Photobacterium profundum SS9] Length = 388 Score = 36.3 bits (82), Expect = 5.6, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 27/70 (38%), Gaps = 17/70 (24%) Query: 209 DYYADSWSKNKGIRIDHIMLSPEATSLLHSARI------------DTKPRGWTKP---SD 253 ++ W+ G+R+D+++ S + + + T +G + SD Sbjct: 318 SGRSNEWTHLSGLRLDYVLPSVDL--SVKQTGVFWPDKKDPLRHLITNEKGKERAQDGSD 375 Query: 254 HTPVIVSLDI 263 H V V L + Sbjct: 376 HRLVWVDLQL 385 >gi|241392429|ref|XP_002409449.1| synaptojanin, putative [Ixodes scapularis] gi|215497492|gb|EEC06986.1| synaptojanin, putative [Ixodes scapularis] Length = 921 Score = 35.9 bits (81), Expect = 5.6, Method: Composition-based stats. Identities = 12/31 (38%), Positives = 15/31 (48%) Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQ 270 RI R K SDH PV+ +DI R + Sbjct: 742 RIAHYGRAELKTSDHRPVVADIDIEVCRVDE 772 >gi|55641101|ref|XP_510084.1| PREDICTED: angel homolog 1 isoform 4 [Pan troglodytes] Length = 682 Score = 35.9 bits (81), Expect = 5.6, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 29/78 (37%), Gaps = 16/78 (20%) Query: 6 VATWN---VNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIET 59 + WN VN L + +PDI+CLQE ++ ++ + L+ + + Sbjct: 284 ILNWNYRFVN--------LMQEFQHWDPDILCLQEV--QEDHYWEQLEPSLRMMGFTCFY 333 Query: 60 CGQKSYNGVAILSKYQPI 77 + Y+P Sbjct: 334 KRRTGCKTDGCAVCYKPT 351 >gi|282881374|ref|ZP_06290053.1| putative oxidoreductase [Prevotella timonensis CRIS 5C-B1] gi|281304780|gb|EFA96861.1| putative oxidoreductase [Prevotella timonensis CRIS 5C-B1] Length = 561 Score = 35.9 bits (81), Expect = 5.7, Method: Composition-based stats. Identities = 23/198 (11%), Positives = 48/198 (24%), Gaps = 9/198 (4%) Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 G+ +++ + L + ++ I Sbjct: 123 AVERWTHIPGIQVMALCDYEKERAEDCQKYLRKASMPAADIYSGEKGYEEICKRKDIDLV 182 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177 I + +E+ + + +I + + C+ Sbjct: 183 YIATDWLHHFPVAKCAMENGKHVAIEVPSAMNMHEIWQLIDMSEKTRLHCVMLENCCYDF 242 Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYS-FWD-YYADSWSKNKGIRIDH-------IML 228 S Q F + I A H S FWD Y+ + G R+D+ + Sbjct: 243 FELNSLNMAQKGLFGEVIYAQGAYRHELSPFWDHYWKKDQNDKLGWRLDYNQKYRGDVYA 302 Query: 229 SPEATSLLHSARIDTKPR 246 + + I R Sbjct: 303 THGLGPVAQVMNIHRGDR 320 >gi|85058440|ref|YP_454142.1| hypothetical protein SG0462 [Sodalis glossinidius str. 'morsitans'] gi|84778960|dbj|BAE73737.1| hypothetical protein [Sodalis glossinidius str. 'morsitans'] Length = 411 Score = 35.9 bits (81), Expect = 5.7, Method: Composition-based stats. Identities = 17/144 (11%), Positives = 35/144 (24%), Gaps = 9/144 (6%) Query: 11 VNSIRARI--HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGV 68 VNS RAR+ L + +PD++ + E + + Y + + Sbjct: 17 VNS-RARLDFPLLLRALLRQDPDVLMVGEIRDPETAAVTLNAARTGYLVLSTLHTLCADS 75 Query: 69 AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKI 128 + ++ R + L + Sbjct: 76 VWKRR------RHGAGAAGHNLVRRTQARFGSFAMNGLWLWRWQGLCAEGRFCRGKMIGR 129 Query: 129 SWIKRFLRFASQRLELEEPLIFAG 152 S +R +Q + I Sbjct: 130 SRRDCGMRLVAQGYQPFRLRIHCW 153 >gi|62859005|ref|NP_001016236.1| angel homolog 1 [Xenopus (Silurana) tropicalis] gi|89268167|emb|CAJ82107.1| novel protein [Xenopus (Silurana) tropicalis] gi|183985907|gb|AAI66333.1| angel homolog 1 (Drosophila) [Xenopus (Silurana) tropicalis] gi|213624587|gb|AAI71302.1| angel homolog 1 (Drosophila) [Xenopus (Silurana) tropicalis] Length = 566 Score = 35.9 bits (81), Expect = 5.7, Method: Composition-based stats. Identities = 12/67 (17%), Positives = 24/67 (35%), Gaps = 5/67 (7%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73 R N+ ++ DIICLQE + ++ L ++ Y + + Sbjct: 172 RWPNILQELQHWEADIICLQEV--QQDHYKEHVEPSLSAIGYSCHFKRRTGRKTDGCCTC 229 Query: 74 YQPIEIV 80 Y+ + Sbjct: 230 YKTQRFM 236 >gi|332030472|gb|EGI70160.1| Protein angel-like protein 2 [Acromyrmex echinatior] Length = 554 Score = 35.9 bits (81), Expect = 5.7, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 27/79 (34%), Gaps = 24/79 (30%) Query: 3 VVTVATWNV----------------N----SIRARIHNLAAWIKENNPDIICLQETKTED 42 ++ + ++N+ N S + R + I E +IICLQE ++ Sbjct: 162 ILKLLSFNILAQNLLEDHLYLYMNHNKKALSWKTRKSLVIQEIFEAEANIICLQE--MQE 219 Query: 43 KNFPF--ETLQSLNYHIET 59 ++ + Y Sbjct: 220 EHLLDFVAPFKQHGYEYLY 238 >gi|225451140|ref|XP_002266491.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 998 Score = 35.9 bits (81), Expect = 5.7, Method: Composition-based stats. Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 3/39 (7%) Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 R+D ++S + S A T PR SDH P+++ Sbjct: 3 RLDRFLVSEDWESHFKGAVQCTLPR---PVSDHFPILLD 38 >gi|47225502|emb|CAG11985.1| unnamed protein product [Tetraodon nigroviridis] Length = 562 Score = 35.9 bits (81), Expect = 5.8, Method: Composition-based stats. Identities = 24/213 (11%), Positives = 52/213 (24%), Gaps = 29/213 (13%) Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + + G + Q ++ + + E F + N Sbjct: 373 YFNCTHLHAPEGEGEVRCEQLDMVIKWIGDFQAANRQPDEEVAFDVLCGDFNFDNCSPDD 432 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 ++D + G P ++ Sbjct: 433 TKEQNHRIFEDYRDPCRAGPGREKPW--------VIGTLLDQPTLYEDDVNNPESLQRTL 484 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM-----LSP 230 E ++ + ++ +T + G RID+I+ +S Sbjct: 485 EREDQRKMYISHPIPAENSPLVYPETDQPW-------------IGRRIDYILYRDSSVSK 531 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + + T G T DH PV + L++ Sbjct: 532 HWRTEIEEVTFITHLAGLT---DHIPVGLRLNV 561 >gi|328779825|ref|XP_395873.4| PREDICTED: protein angel-like [Apis mellifera] Length = 558 Score = 35.9 bits (81), Expect = 5.9, Method: Composition-based stats. Identities = 10/50 (20%), Positives = 20/50 (40%), Gaps = 4/50 (8%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFET--LQSLNYHIETCGQKS 64 R L I ++ICLQE ++++ + L Y+ + + Sbjct: 208 RRQLLLEEILAAQANVICLQE--MQEEHLEEFLIPFKELGYNYLYKRRTN 255 >gi|302345268|ref|YP_003813621.1| endonuclease/exonuclease/phosphatase family protein [Prevotella melaninogenica ATCC 25845] gi|302149592|gb|ADK95854.1| endonuclease/exonuclease/phosphatase family protein [Prevotella melaninogenica ATCC 25845] Length = 324 Score = 35.9 bits (81), Expect = 5.9, Method: Composition-based stats. Identities = 31/258 (12%), Positives = 64/258 (24%), Gaps = 44/258 (17%) Query: 30 PDIICLQETKTEDKNFPFET-----LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLP 84 PDI+ L E E+ + F+ L+ Y G+ + Y P Sbjct: 83 PDIVGLCEV--ENDSVLFDLTRRSLLRKARYEYVMTASNDARGIDVALLYSPFSFRLIKA 140 Query: 85 GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL 144 + + + T + + G+ + + + Sbjct: 141 DTIRVIPMKEMRPTRD-----ILHVEGEIESGDTLHVFLLHAPSRMGGELYSRPFRMHVM 195 Query: 145 EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL 204 E + + A Q + + + + + Sbjct: 196 ERLRSAIDSLRSAYTDPKLLVMGDFNDYADS--PSLQLAYEYGLINISAGVHGRNGAKGT 253 Query: 205 YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKP------------------- 245 Y + + +D I++S S + RI+ P Sbjct: 254 YRYHGEWGS---------LDQILVSVNLRSWVTDCRINDAPFLLEEDTKYGGVKPRRNYN 304 Query: 246 --RGWTKPSDHTPVIVSL 261 R SDH P+++ L Sbjct: 305 GMRFNNGFSDHLPLVLRL 322 >gi|326521854|dbj|BAK04055.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 396 Score = 35.9 bits (81), Expect = 6.0, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 20/52 (38%), Gaps = 13/52 (25%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGW-----------TKPSDHTPVIVSLDI 263 +D+I LS + + + + PRG PSDH P+ + Sbjct: 344 LDYIFLSGD--NSIKPTTLLRIPRGGSPDVEGGLPNFHHPSDHLPIGADFQL 393 >gi|188574659|ref|YP_001911588.1| nuclease [Xanthomonas oryzae pv. oryzae PXO99A] gi|188519111|gb|ACD57056.1| nuclease [Xanthomonas oryzae pv. oryzae PXO99A] Length = 572 Score = 35.9 bits (81), Expect = 6.0, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 25/86 (29%), Gaps = 21/86 (24%) Query: 192 TDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR---IDTKPR-- 246 A YSF D DH +LSP L A I+ Sbjct: 494 WQDAFAVAGVKQPYSFVDDGMSGRQ-------DHALLSPAMAKQLRGAVEWHINADVMDA 546 Query: 247 ---------GWTKPSDHTPVIVSLDI 263 G + SDH PV++ + Sbjct: 547 AGYAKRNLPGPWRSSDHDPVLLGFSL 572 >gi|317496367|ref|ZP_07954721.1| endonuclease/Exonuclease/phosphatase [Gemella moribillum M424] gi|316913503|gb|EFV34995.1| endonuclease/Exonuclease/phosphatase [Gemella moribillum M424] Length = 354 Score = 35.9 bits (81), Expect = 6.0, Method: Composition-based stats. Identities = 38/270 (14%), Positives = 75/270 (27%), Gaps = 34/270 (12%) Query: 18 IHNLAAWIKENNPDIICLQETKTE-------------DKNFPFETLQSLNYHIETCGQKS 64 + N+ IKE D+ LQE + DK ++ + N+ + Sbjct: 94 LTNITRIIKEEAADVTFLQEVDVDSKRTYNINQVDYLDKALDNSSIFAYNFRVAYIPYPL 153 Query: 65 YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-TQTLRIGNLYLPHGNPIT--- 120 + S + + F T N + + + + + Sbjct: 154 PPLGKVNSGIYTSTKFNIENAERYQMPIPFTFPTRLANLKRGFSVIYSNIENSDKKLVLI 213 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + D K + Q +E E G+Y ++ + + + + T Sbjct: 214 NAHLDAYDKDNKGKIAQTKQLIEFMEKEYAKGNYVLVGADFNQELRDLTKEEIEKTPAEL 273 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR------IDHIMLSPEA-T 233 + D + +D ++ KG ID + S Sbjct: 274 WRAELFDKTLLKDKFKLYYDNSRP----SARLNNKPYEKGSNGTYEFIIDGFIASDNIEV 329 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 S + +D R SDH PV + + Sbjct: 330 SQVK--TLDQDYRY----SDHNPVKLRFRL 353 >gi|190408129|gb|EDV11394.1| DNase [Saccharomyces cerevisiae RM11-1a] gi|256270016|gb|EEU05262.1| Ngl3p [Saccharomyces cerevisiae JAY291] Length = 506 Score = 35.9 bits (81), Expect = 6.0, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 20/47 (42%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 R L +K+ PD++ LQE + NF E L + + + Sbjct: 139 RSKVLVHELKKYRPDVVSLQEVDYNELNFWQENFHKLGFDMIFKRHE 185 >gi|226532622|ref|NP_001141499.1| hypothetical protein LOC100273611 [Zea mays] gi|194704824|gb|ACF86496.1| unknown [Zea mays] Length = 443 Score = 35.9 bits (81), Expect = 6.1, Method: Composition-based stats. Identities = 33/280 (11%), Positives = 70/280 (25%), Gaps = 51/280 (18%) Query: 29 NPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDL 88 +PD++CLQE + ++S Y + HL +D Sbjct: 145 DPDVVCLQEV--DRFQDIAAGMKSRGYEGIFQ--RRTGDTRDGCAIFWKSKQLHLVEEDS 200 Query: 89 DVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQR------L 142 + F + + I + +R + Sbjct: 201 IDFSEFNLRNNVAQICVFELNGTHKFVLGNIHVLFNPKRGDVKLGQIRMLLENANALAEK 260 Query: 143 ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR----QSFQKLQNMGFTDAIRAT 198 + P++ AGD+N P + + S + + + T Sbjct: 261 WDKIPIVLAGDFNSTPDSAIYKFLSTMKLNISLHDRRHLSGLDSTEFGYELCSLLKYQWT 320 Query: 199 HDTHHLYSFWDY---------------YADSWSKNKGIR---------------IDHIML 228 + + + S N+G+ +D++ Sbjct: 321 DEEVRNATGYSNVMVAEHPLKLSSSYAMLKGNSNNRGLHGEPLATSYHRKFLGTVDYLWH 380 Query: 229 SPEAT-SLLHS---ARIDTKPRG---WTKPSDHTPVIVSL 261 + S + + + RG SDH P++ Sbjct: 381 THGIECSRVLETLPISVLKRTRGLPTREIGSDHLPIVAEF 420 >gi|326497785|dbj|BAK05982.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 85 Score = 35.9 bits (81), Expect = 6.1, Method: Composition-based stats. Identities = 8/36 (22%), Positives = 17/36 (47%), Gaps = 2/36 (5%) Query: 26 KENNPDIICLQETKTEDKNFP--FETLQSLNYHIET 59 + N D++CLQET ++ + + Y+ + Sbjct: 50 QRENFDVLCLQETHLKEGDVKDFKNLIPGYEYNYWS 85 >gi|17529698|gb|AAL40415.1|AF369891_4 endonuclease/reverse transcriptase [Branchiostoma floridae] Length = 1045 Score = 35.9 bits (81), Expect = 6.1, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 25/66 (37%), Gaps = 4/66 (6%) Query: 4 VTVATWNVN--SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + NVN S+R ++ L I+ PDII ET E + Y Sbjct: 105 IRIL--NVNFQSVRGKVPELDNLIQSLRPDIILGTETWLETPEISSSEIFPTGYTKVYRK 162 Query: 62 QKSYNG 67 ++ G Sbjct: 163 DRNKYG 168 >gi|259148455|emb|CAY81700.1| Ngl3p [Saccharomyces cerevisiae EC1118] Length = 506 Score = 35.9 bits (81), Expect = 6.2, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 20/47 (42%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 R L +K+ PD++ LQE + NF E L + + + Sbjct: 139 RSKVLVHELKKYRPDVVSLQEVDYNELNFWQENFHKLGFDMIFKRHE 185 >gi|261251117|ref|ZP_05943691.1| metal-dependent hydrolase [Vibrio orientalis CIP 102891] gi|260937990|gb|EEX93978.1| metal-dependent hydrolase [Vibrio orientalis CIP 102891] Length = 292 Score = 35.9 bits (81), Expect = 6.2, Method: Composition-based stats. Identities = 25/238 (10%), Positives = 57/238 (23%), Gaps = 15/238 (6%) Query: 31 DIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDV 90 DI+ QE DK + + S + + N S G + Sbjct: 64 DILAFQEV--NDKQALTKVIGSDYQFFFSHRSNADNQRHQFSDINQYTGFAIRKGIAVKD 121 Query: 91 QARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIF 150 + + P+ + + L+ Sbjct: 122 MPDIKLDRSPNSKLRFASYVMLHPNSQQPIHALSVHLKARCSGAYNGSKACRTLKVQGQQ 181 Query: 151 AGDY---NIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF 207 + N + + + + + + + Sbjct: 182 LNKWIKEREKNNDAYVILGDFNHNLSYNGDWLWKGISQGTDATLATKMTKANCKVK---- 237 Query: 208 WDYYADSWSKNKGIRIDHIMLSPEA---TSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 + + IDHI++S + + + ++D + SDH P+ VS+ Sbjct: 238 -SRNNPNKTHQFKSLIDHIIVSSDLGFHSPKQNLYKVDDVL--NRQMSDHCPISVSIK 292 >gi|73964324|ref|XP_547922.2| PREDICTED: similar to angel homolog 1 [Canis familiaris] Length = 652 Score = 35.9 bits (81), Expect = 6.2, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 29/75 (38%), Gaps = 10/75 (13%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQ 62 + WN R NL + +PDI+CLQE ++ ++ + L+ + + + Sbjct: 254 ILNWN-----YRFANLMQEFQHWDPDILCLQEV--QEDHYWEQLEPSLRMMGFTCFYKRR 306 Query: 63 KSYNGVAILSKYQPI 77 Y+P Sbjct: 307 TGCKTDGCAVCYKPT 321 >gi|224282153|ref|NP_056120.2| protein angel homolog 1 [Homo sapiens] gi|17369713|sp|Q9UNK9|ANGE1_HUMAN RecName: Full=Protein angel homolog 1 gi|5524739|gb|AAD44362.1|AF111169_2 KIAA0759 [Homo sapiens] gi|52545611|emb|CAB70667.2| hypothetical protein [Homo sapiens] gi|119601668|gb|EAW81262.1| angel homolog 1 (Drosophila), isoform CRA_b [Homo sapiens] gi|119601669|gb|EAW81263.1| angel homolog 1 (Drosophila), isoform CRA_b [Homo sapiens] gi|168267560|dbj|BAG09836.1| angel homolog 1 [synthetic construct] Length = 670 Score = 35.9 bits (81), Expect = 6.2, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 29/78 (37%), Gaps = 16/78 (20%) Query: 6 VATWN---VNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIET 59 + WN VN L + +PDI+CLQE ++ ++ + L+ + + Sbjct: 272 ILNWNYRFVN--------LMQEFQHWDPDILCLQEV--QEDHYWEQLEPSLRMMGFTCFY 321 Query: 60 CGQKSYNGVAILSKYQPI 77 + Y+P Sbjct: 322 KRRTGCKTDGCAVCYKPT 339 >gi|323336135|gb|EGA77406.1| Ngl3p [Saccharomyces cerevisiae Vin13] Length = 506 Score = 35.9 bits (81), Expect = 6.3, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 20/47 (42%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 R L +K+ PD++ LQE + NF E L + + + Sbjct: 139 RSKVLVHELKKYRPDVVSLQEVDYNELNFWQENFHKLGFDMIFKRHE 185 >gi|194225225|ref|XP_001493083.2| PREDICTED: similar to Protein angel homolog 1 [Equus caballus] Length = 650 Score = 35.9 bits (81), Expect = 6.3, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 29/75 (38%), Gaps = 10/75 (13%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQ 62 + WN R NL + +PDI+CLQE ++ ++ + L+ + + + Sbjct: 252 ILNWN-----YRFANLMQEFQHWDPDILCLQEV--QEDHYWEQLEPSLRMMGFTCFYKRR 304 Query: 63 KSYNGVAILSKYQPI 77 Y+P Sbjct: 305 TGCKTDGCAVCYKPT 319 >gi|20379588|gb|AAH28714.1| Angel homolog 1 (Drosophila) [Homo sapiens] Length = 670 Score = 35.9 bits (81), Expect = 6.3, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 29/78 (37%), Gaps = 16/78 (20%) Query: 6 VATWN---VNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIET 59 + WN VN L + +PDI+CLQE ++ ++ + L+ + + Sbjct: 272 ILNWNYRFVN--------LMQEFQHWDPDILCLQEV--QEDHYWEQLEPSLRMMGFTCFY 321 Query: 60 CGQKSYNGVAILSKYQPI 77 + Y+P Sbjct: 322 KRRTGCKTDGCAVCYKPT 339 >gi|11359908|pir||T46340 hypothetical protein DKFZp434B0814.1 - human (fragment) gi|3882239|dbj|BAA34479.1| KIAA0759 protein [Homo sapiens] Length = 673 Score = 35.9 bits (81), Expect = 6.3, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 29/78 (37%), Gaps = 16/78 (20%) Query: 6 VATWN---VNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIET 59 + WN VN L + +PDI+CLQE ++ ++ + L+ + + Sbjct: 275 ILNWNYRFVN--------LMQEFQHWDPDILCLQEV--QEDHYWEQLEPSLRMMGFTCFY 324 Query: 60 CGQKSYNGVAILSKYQPI 77 + Y+P Sbjct: 325 KRRTGCKTDGCAVCYKPT 342 >gi|282880228|ref|ZP_06288945.1| endonuclease/exonuclease/phosphatase family protein [Prevotella timonensis CRIS 5C-B1] gi|281305888|gb|EFA97931.1| endonuclease/exonuclease/phosphatase family protein [Prevotella timonensis CRIS 5C-B1] Length = 316 Score = 35.9 bits (81), Expect = 6.4, Method: Composition-based stats. Identities = 11/62 (17%), Positives = 21/62 (33%), Gaps = 21/62 (33%) Query: 223 IDHIMLSPEATSLLHSARIDTKP---------------------RGWTKPSDHTPVIVSL 261 +DHI L + +L+ + P R SDH P+++ + Sbjct: 253 LDHIFLDKSSAALVQECYVHDAPFLLEKDEKYGGVKPRRNYQGPRYLNGFSDHLPLVMRI 312 Query: 262 DI 263 + Sbjct: 313 NW 314 >gi|147807236|emb|CAN66193.1| hypothetical protein VITISV_013311 [Vitis vinifera] Length = 1222 Score = 35.9 bits (81), Expect = 6.4, Method: Composition-based stats. Identities = 7/59 (11%), Positives = 22/59 (37%), Gaps = 7/59 (11%) Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 +++ + + R+D +++ + + + R SDH P+++ Sbjct: 335 QGGAFTW----SGGRNNQSWXRLDRFLVTQQWLEMFSGIA---QCRLQRPTSDHFPILL 386 >gi|323347254|gb|EGA81528.1| Ngl3p [Saccharomyces cerevisiae Lalvin QA23] Length = 503 Score = 35.9 bits (81), Expect = 6.4, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 20/47 (42%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 R L +K+ PD++ LQE + NF E L + + + Sbjct: 139 RSKVLVHELKKYRPDVVSLQEVDYNELNFWQENFHKLGFDMIFKRHE 185 >gi|222617844|gb|EEE53976.1| hypothetical protein OsJ_00596 [Oryza sativa Japonica Group] Length = 1066 Score = 35.9 bits (81), Expect = 6.4, Method: Composition-based stats. Identities = 23/152 (15%), Positives = 50/152 (32%), Gaps = 10/152 (6%) Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173 + I D+ R + E ++ I + + N+A Sbjct: 473 YNFRYIDVLIKDESCPVQWRCTFVYGEPKASERHNMWTLLRRIKSNSTAPWCLVGDFNEA 532 Query: 174 CFTLEVR--QSFQKLQNMGFTDAIRATHDTHHLYS---F-WDYYADSWSKNKGIRIDHIM 227 + E ++ Q M F + + ++ + +D N +R+D + Sbjct: 533 MWQFEHFSDHKRREKQIMDFREVLSHCDVFDLGFTGAPWTFDNKQKGR-NNVRVRLDRAV 591 Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 S +SL +A + SDH+P+++ Sbjct: 592 ASQSWSSLFPAAEV---IHLTVSSSDHSPILL 620 >gi|302808860|ref|XP_002986124.1| hypothetical protein SELMODRAFT_425096 [Selaginella moellendorffii] gi|300146272|gb|EFJ12943.1| hypothetical protein SELMODRAFT_425096 [Selaginella moellendorffii] Length = 1035 Score = 35.9 bits (81), Expect = 6.5, Method: Composition-based stats. Identities = 22/127 (17%), Positives = 38/127 (29%), Gaps = 7/127 (5%) Query: 148 LIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF 207 I AGD+N + D II + SF I +++ Sbjct: 754 WILAGDFNFVDHEEDKQGGIIQDRRTRAERLAWNSFLLQIGTCDAYEIPGFVTHEPRFTW 813 Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPR 267 + + R+D L+ + ID SDH P+ ++L R Sbjct: 814 RERQRRGIQR----RLDRFYLTMDLCMQGGKLDIDNTYTD---FSDHHPIRLTLPFRRSR 866 Query: 268 KKQQDST 274 ++ Sbjct: 867 GPRKPVA 873 >gi|188576654|ref|YP_001913583.1| hypothetical protein PXO_00879 [Xanthomonas oryzae pv. oryzae PXO99A] gi|188521106|gb|ACD59051.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae PXO99A] Length = 525 Score = 35.9 bits (81), Expect = 6.5, Method: Composition-based stats. Identities = 26/205 (12%), Positives = 58/205 (28%), Gaps = 19/205 (9%) Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL------R 107 ++ + N + ++ + G E + + R Sbjct: 133 GFYYHFLDMQQGNRYDSWVELSSVDTALLMMGVLFTQSYYDGEDPREKEIRQIADTLYKR 192 Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167 + +L P+ S + + +I ++ + L + + + + P + Sbjct: 193 VDWRWLQPRAPLISMGWFPESGFINHDWMGYNEAMMLYILALGSPTHGVDPDAWTSWTRT 252 Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227 + + + SF L ++ D Y + +G ID+ + Sbjct: 253 YNNDWGVYQGQEYLSFGPLFGHQYSHVWIDFRDIQDQY----------MRERG--IDYFL 300 Query: 228 LSPEATSLLHSARIDTKPRGWTKPS 252 S AT ID P W S Sbjct: 301 NSRRATLAQRDYAID-NPMKWKDYS 324 >gi|147854690|emb|CAN80237.1| hypothetical protein VITISV_036283 [Vitis vinifera] Length = 756 Score = 35.9 bits (81), Expect = 6.5, Method: Composition-based stats. Identities = 10/39 (25%), Positives = 19/39 (48%), Gaps = 3/39 (7%) Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 R+D ++S + + A + PR SDH P+++ Sbjct: 610 RLDRFLISEDWENHFSGASQCSLPR---PVSDHFPILLD 645 >gi|57164482|gb|AAW34241.1| putative inositol polyphosphate 5-phosphatase [Oryza sativa Japonica Group] gi|108709919|gb|ABF97714.1| Type I inositol-1,4,5-trisphosphate 5-phosphatase 11, putative, expressed [Oryza sativa Japonica Group] Length = 335 Score = 35.9 bits (81), Expect = 6.5, Method: Composition-based stats. Identities = 43/281 (15%), Positives = 79/281 (28%), Gaps = 33/281 (11%) Query: 6 VATWNVNSIRARIHNLAAWIKEN-NPD--IICLQET-KTEDKNFPFETLQSLNYHIETCG 61 + TWN+N + + ++ + N D + LQE K + ET+ + + Sbjct: 54 IITWNMNG-KMSVEDVTKLVSSNRKFDLLVFGLQEVPKCDVAQVLQETMAETHILLCQKT 112 Query: 62 QKSYNGVAILSKYQPIEIVT---------HLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 +S +K I G + + + + Sbjct: 113 MQSLQMFLFGAKSSEKYIRELKVDKHAVGGCGGIIGRKKGAVAMYINFSGIRMVFVSCHL 172 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD--------CY 164 H N + + + F + Q + + ++ GD N Q Sbjct: 173 AAHENKVEKRNSECQHISHSLFSKNDIQYTKSADITVWLGDLNYRLQGISSIPARKLIEE 232 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI- 223 N E + T + T+ + S +D + RI Sbjct: 233 NRQSLRGKDQLLQEAEKGEVFNGYCEGTLLFKPTYKYNIGSSNYDTSYKIRVPSWTDRIL 292 Query: 224 ---DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 DH + ++L+S R SDH PV L Sbjct: 293 FKVDH---TSGLDAVLNSYEALDCIRS----SDHKPVRAHL 326 >gi|167518073|ref|XP_001743377.1| hypothetical protein [Monosiga brevicollis MX1] gi|163778476|gb|EDQ92091.1| predicted protein [Monosiga brevicollis MX1] Length = 367 Score = 35.9 bits (81), Expect = 6.6, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 10/43 (23%) Query: 4 VTVAT---WNVN------SIRARIHNLAAWIKENNPDIICLQE 37 + + + WNVN ++ R+ L + I E NPD+I QE Sbjct: 193 LKLVSYNIWNVNKFQDDPYLK-RMERLTSEIHEANPDVIAFQE 234 >gi|327537765|gb|EGF24470.1| hypothetical protein RBWH47_04462 [Rhodopirellula baltica WH47] Length = 58 Score = 35.9 bits (81), Expect = 6.7, Method: Composition-based stats. Identities = 9/50 (18%), Positives = 27/50 (54%), Gaps = 6/50 (12%) Query: 214 SWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 + + N+ ++D++ + P + + + + +P SDH P++V +++ Sbjct: 6 ARTPNR--QLDYVAMYPANSWRIVESEVLDEP----VASDHRPLLVEVEL 49 >gi|301757849|ref|XP_002914778.1| PREDICTED: protein angel homolog 1-like [Ailuropoda melanoleuca] Length = 675 Score = 35.9 bits (81), Expect = 6.7, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 29/75 (38%), Gaps = 10/75 (13%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQ 62 + WN R NL + +PDI+CLQE ++ ++ + L+ + + + Sbjct: 277 ILNWN-----YRFANLMQEFQHWDPDILCLQEV--QEDHYWEQLEPSLRMMGFTCFYKRR 329 Query: 63 KSYNGVAILSKYQPI 77 Y+P Sbjct: 330 TGCKTDGCAVCYKPT 344 >gi|288801511|ref|ZP_06406963.1| endonuclease/Exonuclease/phosphatase [Prevotella sp. oral taxon 299 str. F0039] gi|288331592|gb|EFC70078.1| endonuclease/Exonuclease/phosphatase [Prevotella sp. oral taxon 299 str. F0039] Length = 314 Score = 35.9 bits (81), Expect = 6.7, Method: Composition-based stats. Identities = 11/61 (18%), Positives = 19/61 (31%), Gaps = 21/61 (34%) Query: 223 IDHIMLSPEATSLLHSARI--------DTKPRGWTKP-------------SDHTPVIVSL 261 +DHI +S I + + G +P SDH P++ Sbjct: 252 LDHIFVSEPLRKYWLDCFINDADFLLCNDEKYGGKQPFRCYIGAKYHEGYSDHLPLVAHF 311 Query: 262 D 262 + Sbjct: 312 E 312 >gi|116179164|ref|XP_001219431.1| predicted protein [Chaetomium globosum CBS 148.51] gi|88184507|gb|EAQ91975.1| predicted protein [Chaetomium globosum CBS 148.51] Length = 593 Score = 35.9 bits (81), Expect = 6.7, Method: Composition-based stats. Identities = 9/40 (22%), Positives = 14/40 (35%), Gaps = 4/40 (10%) Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 ID ++ S + L I SDH + + D Sbjct: 415 IDLVLASADLADQLLRCTIHP----CDHGSDHRAIETAFD 450 >gi|281351455|gb|EFB27039.1| hypothetical protein PANDA_002696 [Ailuropoda melanoleuca] Length = 646 Score = 35.9 bits (81), Expect = 6.8, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 29/75 (38%), Gaps = 10/75 (13%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQ 62 + WN R NL + +PDI+CLQE ++ ++ + L+ + + + Sbjct: 248 ILNWN-----YRFANLMQEFQHWDPDILCLQEV--QEDHYWEQLEPSLRMMGFTCFYKRR 300 Query: 63 KSYNGVAILSKYQPI 77 Y+P Sbjct: 301 TGCKTDGCAVCYKPT 315 >gi|223935015|ref|ZP_03626934.1| hypothetical protein Cflav_PD5545 [bacterium Ellin514] gi|223896468|gb|EEF62910.1| hypothetical protein Cflav_PD5545 [bacterium Ellin514] Length = 541 Score = 35.9 bits (81), Expect = 6.8, Method: Composition-based stats. Identities = 14/142 (9%), Positives = 33/142 (23%), Gaps = 1/142 (0%) Query: 85 GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL 144 V + + + + + +T + A + Sbjct: 164 NPPAQVNYFYNDLSPYGSWVQVDGFGWCWQPRTVVTVHGWRPYCDGGHWVNTDAGWYWQS 223 Query: 145 EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL 204 + +A + H+ + + V + A D Sbjct: 224 DYSWGWATFHYGRWHLHERCGWVWIPDTVWAPAWVTWRADEGHCGWAPLPPHADFDIRLG 283 Query: 205 YSFWDYYADSWSKNKGIRIDHI 226 Y F + + G+R+DH Sbjct: 284 YRFNGVSVRA-DFDFGLRLDHF 304 >gi|55167960|gb|AAV43829.1| hypothetical protein [Oryza sativa Japonica Group] gi|55168037|gb|AAV43905.1| hypothetical protein [Oryza sativa Japonica Group] Length = 796 Score = 35.9 bits (81), Expect = 6.8, Method: Composition-based stats. Identities = 26/175 (14%), Positives = 48/175 (27%), Gaps = 18/175 (10%) Query: 85 GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY--DDKISWIKRFLRFASQRL 142 G L + N + + + + Y +K + + Sbjct: 395 GIALFWDESIKVELKSYNVRHIDVLITESDGERWRGTFVYGEPRSQDRLKMWTLLRRIKS 454 Query: 143 ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH 202 P + GD+N + ++ + + L ++GF Sbjct: 455 NAALPWLMIGDFNEAMWQSEHWSRVRRSERQMKDFREALADCDLHDLGFHGVP------- 507 Query: 203 HLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTP 256 W Y + + N +R+D + SP A I T SDH P Sbjct: 508 -----WTYDNNQRGANNVRVRLDRAVASPAWLGRFRQASITHLV---TPSSDHVP 554 >gi|37654314|gb|AAQ96262.1| LRRGT00049 [Rattus norvegicus] Length = 898 Score = 35.9 bits (81), Expect = 6.8, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 24/69 (34%), Gaps = 10/69 (14%) Query: 186 LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKP 245 + M TD R + Y+F+ ++SK IDHI+ + I Sbjct: 668 MSQMDLTDIYRTFYPKAKGYTFFSAPHGTFSK-----IDHIIGQKTGLNRYRKIEIIPCV 722 Query: 246 RGWTKPSDH 254 SDH Sbjct: 723 L-----SDH 726 >gi|242039321|ref|XP_002467055.1| hypothetical protein SORBIDRAFT_01g018876 [Sorghum bicolor] gi|241920909|gb|EER94053.1| hypothetical protein SORBIDRAFT_01g018876 [Sorghum bicolor] Length = 477 Score = 35.9 bits (81), Expect = 6.8, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 9/57 (15%) Query: 204 LYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 +++ + KN + ++D ++ S E S + TK R SDH P+I+ Sbjct: 247 RFTW-----SNKQKNPIMVKLDRVLASEEWESKFPTCFAWTKAR---IGSDHCPIIL 295 >gi|114654101|ref|XP_001163194.1| PREDICTED: angel homolog 1 isoform 3 [Pan troglodytes] Length = 670 Score = 35.9 bits (81), Expect = 6.8, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 29/78 (37%), Gaps = 16/78 (20%) Query: 6 VATWN---VNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIET 59 + WN VN L + +PDI+CLQE ++ ++ + L+ + + Sbjct: 272 ILNWNYRFVN--------LMQEFQHWDPDILCLQEV--QEDHYWEQLEPSLRMMGFTCFY 321 Query: 60 CGQKSYNGVAILSKYQPI 77 + Y+P Sbjct: 322 KRRTGCKTDGCAVCYKPT 339 >gi|323352922|gb|EGA85222.1| Ngl3p [Saccharomyces cerevisiae VL3] Length = 506 Score = 35.9 bits (81), Expect = 6.9, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 20/47 (42%) Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 R L +K+ PD++ LQE + NF E L + + + Sbjct: 139 RSKVLVHELKKYRPDVVSLQEVDYNELNFWQENFHKLGFDMIFKRHE 185 >gi|222635572|gb|EEE65704.1| hypothetical protein OsJ_21338 [Oryza sativa Japonica Group] Length = 901 Score = 35.9 bits (81), Expect = 6.9, Method: Composition-based stats. Identities = 19/118 (16%), Positives = 39/118 (33%), Gaps = 4/118 (3%) Query: 144 LEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHH 203 + N+ +N +W+ + + +S + D Sbjct: 660 WTALRNISQTSNLPWLVMGDFNETMWQFEHFSRTQRNESQMQAFRDVLQDCELHDLGFQG 719 Query: 204 LYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + +D D W N +R+D + + + SA+I + SDH V++ L Sbjct: 720 VPHTYDNRRDGW-NNVKVRLDRAVANNGWRDIFPSAQIVHLV---SPCSDHCSVLLKL 773 >gi|58581792|ref|YP_200808.1| hypothetical protein XOO2169 [Xanthomonas oryzae pv. oryzae KACC10331] gi|58426386|gb|AAW75423.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae KACC10331] Length = 539 Score = 35.9 bits (81), Expect = 6.9, Method: Composition-based stats. Identities = 26/205 (12%), Positives = 58/205 (28%), Gaps = 19/205 (9%) Query: 54 NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL------R 107 ++ + N + ++ + G E + + R Sbjct: 147 GFYYHFLDMQQGNRYDSWVELSSVDTALLMMGVLFTQSYYDGEDPREKEIRQIADTLYKR 206 Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167 + +L P+ S + + +I ++ + L + + + + P + Sbjct: 207 VDWRWLQPRAPLISMGWFPESGFINHDWMGYNEAMMLYILALGSPTHGVDPDAWTSWTRT 266 Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227 + + + SF L ++ D Y + +G ID+ + Sbjct: 267 YNNDWGVYQGQEYLSFGPLFGHQYSHVWIDFRDIQDQY----------MRERG--IDYFL 314 Query: 228 LSPEATSLLHSARIDTKPRGWTKPS 252 S AT ID P W S Sbjct: 315 NSRRATLAQRDYAID-NPMKWKDYS 338 >gi|147825435|emb|CAN77770.1| hypothetical protein VITISV_044337 [Vitis vinifera] Length = 729 Score = 35.9 bits (81), Expect = 6.9, Method: Composition-based stats. Identities = 10/45 (22%), Positives = 17/45 (37%), Gaps = 4/45 (8%) Query: 217 KNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 N+ R+D ++ P + R SDH PV++ Sbjct: 165 NNQSWARLDRFLVPPSWLDHFSGVL---QSRLPRPISDHFPVLLE 206 >gi|34392572|dbj|BAC82617.1| pol-like protein [Danio rerio] Length = 1279 Score = 35.9 bits (81), Expect = 6.9, Method: Composition-based stats. Identities = 40/278 (14%), Positives = 89/278 (32%), Gaps = 45/278 (16%) Query: 1 MSVVTVATWNVNSI---RARIHNLAAWIKENNPDIICLQET--KTEDKNFPFETLQSLNY 55 + V+ ++N + R + N+ K II LQET K E + + Y Sbjct: 11 LMVLNCVSFNARGLMDLR-KFKNVKEKCKREE--IIILQETNWKNEVMDIYKKEWDGDFY 67 Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 + ++ + D Q + + + + + N++ P+ Sbjct: 68 YSN----GDTKAGRGVAILIKKNALQMSKVIYKDKQGKCMILEIKYEGKDIILVNVHAPN 123 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 + ++ + L+ + +I GD+N + D +++++D Sbjct: 124 EESEKKSFFNI-----------LRRFLKNYKQIIVCGDFNTVFSRQDITEGMVFKSDTGR 172 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG-----IRIDHIMLSP 230 ++ G D R + +S + G RID+++ + Sbjct: 173 KE----LKSLIEEKGMIDIWRERNGKKKEFS--------RRQIVGNFVNQSRIDYVLCTR 220 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268 + R D SDH V + + E ++ Sbjct: 221 NIEIYIEKIRYDETVL-----SDHKFVFFNFNTEEIQR 253 >gi|296215581|ref|XP_002754191.1| PREDICTED: protein angel homolog 1 [Callithrix jacchus] Length = 663 Score = 35.9 bits (81), Expect = 7.0, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 29/78 (37%), Gaps = 16/78 (20%) Query: 6 VATWN---VNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIET 59 + WN VN L + +PDI+CLQE ++ ++ + L+ + + Sbjct: 265 ILNWNYRFVN--------LMQEFQHWDPDILCLQEV--QEDHYWEQLEPSLRMMGFTCFY 314 Query: 60 CGQKSYNGVAILSKYQPI 77 + Y+P Sbjct: 315 KRRTGCKTDGCAVCYKPT 332 >gi|222631150|gb|EEE63282.1| hypothetical protein OsJ_18092 [Oryza sativa Japonica Group] Length = 763 Score = 35.9 bits (81), Expect = 7.0, Method: Composition-based stats. Identities = 26/175 (14%), Positives = 48/175 (27%), Gaps = 18/175 (10%) Query: 85 GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY--DDKISWIKRFLRFASQRL 142 G L + N + + + + Y +K + + Sbjct: 362 GIALFWDESIKVELKSYNVRHIDVLITESDGERWRGTFVYGEPRSQDRLKMWTLLRRIKS 421 Query: 143 ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH 202 P + GD+N + ++ + + L ++GF Sbjct: 422 NAALPWLMIGDFNEAMWQSEHWSRVRRSERQMKDFREALADCDLHDLGFHGVP------- 474 Query: 203 HLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTP 256 W Y + + N +R+D + SP A I T SDH P Sbjct: 475 -----WTYDNNQRGANNVRVRLDRAVASPAWLGRFRQASITHLV---TPSSDHVP 521 >gi|307194526|gb|EFN76818.1| Synaptojanin-1 [Harpegnathos saltator] Length = 1172 Score = 35.9 bits (81), Expect = 7.1, Method: Composition-based stats. Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 4/29 (13%) Query: 246 RGWTKPSDHTPVIVSLDIP----EPRKKQ 270 R K SDH PVI ++DI +P K++ Sbjct: 834 RAELKQSDHRPVIATIDIDVHCVDPEKRE 862 >gi|290242949|ref|YP_003494619.1| Endonuclease/exonuclease/phosphatase [Thioalkalivibrio sp. K90mix] gi|288945454|gb|ADC73152.1| Endonuclease/exonuclease/phosphatase [Thioalkalivibrio sp. K90mix] Length = 361 Score = 35.9 bits (81), Expect = 7.1, Method: Composition-based stats. Identities = 32/278 (11%), Positives = 61/278 (21%), Gaps = 35/278 (12%) Query: 1 MSVVTVATWNVN--SIR--------ARIHNLAAWIKENNPDIICLQETKTEDKNF----- 45 ++ + +A+WN+ ARI D + +QE + Sbjct: 23 LADLRLASWNIQHLGWNVGKDYPAVARI--------AAQFDFLAIQEV-MNAEGIYRLRD 73 Query: 46 PFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT 105 E + + N + E G L + Sbjct: 74 TLEDATGAEWSVLYSDALGRNTYREKYAFLWREAAVEYVGGALTYIDEADRFAREPFSAV 133 Query: 106 LRIGNL-YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164 R + T D ++ L + + I+ + Sbjct: 134 FRSRGTDQHFLAATVHITYGDRVADRVEEIEALRRYWDWLADVMPEYAGERILFGDFNLP 193 Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRID 224 E + +D + + G Sbjct: 194 PHHDGWASMRAVAEPLVTEGATTLSTHDRRYANLYDNL----WVPKDHTLPLGDAG---- 245 Query: 225 HIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262 I+ P S + D + + SDH PV V + Sbjct: 246 -ILPFPVVLSEVTGVYWDHEK-ARDRVSDHAPVYVLFE 281 >gi|224126187|ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1| predicted protein [Populus trichocarpa] Length = 1046 Score = 35.9 bits (81), Expect = 7.2, Method: Composition-based stats. Identities = 34/261 (13%), Positives = 77/261 (29%), Gaps = 34/261 (13%) Query: 4 VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61 + + WN+ + I + L I + + L ET+ +DKN Sbjct: 455 MIIGCWNIRGLNDPIKHSELHRLIHQERITLFGLVETRVKDKNKD-----------NVSQ 503 Query: 62 QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121 + + + + + V+ + ++ I + I Sbjct: 504 LLLRSWSFLYNYDFSCRGRIWVCWNADTVKVDVFGMSDEAIHVSVTILATNISFNTSIIY 563 Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181 + + + P I GD+N I L+ Sbjct: 564 GDNNASLREALWSDIVSRSDGWESTPWILMGDFNAIRNQSGRLGGSTTWAGTMDRLDTCI 623 Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR-IDHIMLSP--EATSLLHS 238 K+ ++ ++ Y++ ++ +N +R +D ++++ L Sbjct: 624 REAKVDDLRYSGMH---------YTW----SNQCPENLIMRTLDRVLVNEKWNLNFPLSK 670 Query: 239 ARIDTKPRGWTKPSDHTPVIV 259 AR SDH+P++V Sbjct: 671 ARFLPSGM-----SDHSPMVV 686 >gi|240960473|ref|XP_002400551.1| conserved hypothetical protein [Ixodes scapularis] gi|215490694|gb|EEC00337.1| conserved hypothetical protein [Ixodes scapularis] Length = 699 Score = 35.9 bits (81), Expect = 7.2, Method: Composition-based stats. Identities = 40/297 (13%), Positives = 80/297 (26%), Gaps = 57/297 (19%) Query: 2 SVVT-----VATWNV--NS----IRARIHNLAAWIKENNPDI--ICLQETKTEDKNFPFE 48 ++ + TWNV +R+ + I E PD+ I QE +N + Sbjct: 12 KMLRDFRVYIMTWNVVCRGPIEDLRSALGLEPPVIPEALPDMYAIGFQEVSARPQNLLSQ 71 Query: 49 TLQSLNY--------HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT 100 + H + + IL+ + E + HL G + + Sbjct: 72 AFFEEPWIQAIRNALHKYSYVKHVRLQGLILTIFTKREHLIHLRGIQSTYTRTGLGGVWG 131 Query: 101 INTQ-----TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYN 155 + ++ + + + + + ++ + I DY Sbjct: 132 NKGGVTIRLCVYGCSMCFVNSHLAAHESETFQRVTEYNIIIEKQRFVDAQATNILTHDYA 191 Query: 156 IIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHD--THHLYSFWDYYAD 213 + + ++E Q LQ + D +F + Sbjct: 192 FWFGDLNFRVDDCTMEEMKASIENGTFDQMLQKDQLMLTALSAIDLTVDVDCTFCSHRKP 251 Query: 214 SWSKNKGIR----------ID---HIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257 +W+ R +D H +S + I SDH PV Sbjct: 252 AWTDRILFRFTKNAYENVALDLKQHQYVSHDL-------YIQ---------SDHKPV 292 >gi|195174832|ref|XP_002028174.1| GL16263 [Drosophila persimilis] gi|194116644|gb|EDW38687.1| GL16263 [Drosophila persimilis] Length = 1426 Score = 35.9 bits (81), Expect = 7.2, Method: Composition-based stats. Identities = 15/170 (8%), Positives = 31/170 (18%), Gaps = 1/170 (0%) Query: 34 CLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR 93 CL ETK ++ + ++S + + I E G + Sbjct: 964 CLGETKCQNNATCIDGVESYRCECQPGFSGEFCDTKIQFCSPDCECQAGFHGTNCTDNID 1023 Query: 94 FIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGD 153 + N T I + + + Sbjct: 1024 DCQNHMCQNGGTC-IDGINDYVCKCPDDFTGKYCEGHNMISMMYPQTSPCQNHECKHGVC 1082 Query: 154 YNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHH 203 + D + + N T + Sbjct: 1083 FQPNAAGSDYLCKCHPGYTGKWCEYLTSISFVHNNSFVELEPLRTRPEAN 1132 >gi|110633268|ref|YP_673476.1| endonuclease/exonuclease/phosphatase [Mesorhizobium sp. BNC1] gi|110284252|gb|ABG62311.1| Endonuclease/exonuclease/phosphatase [Chelativorans sp. BNC1] Length = 335 Score = 35.5 bits (80), Expect = 7.3, Method: Composition-based stats. Identities = 12/56 (21%), Positives = 24/56 (42%), Gaps = 8/56 (14%) Query: 216 SKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD-IPEPRKKQ 270 + G+ ID+I + + R + SDH P++V +P P+++ Sbjct: 281 RRTAGLPIDNIFVKGRVA-------VLQTKRLESVGSDHLPLLVEFSLLPGPQQEP 329 >gi|320592218|gb|EFX04657.1| sphingomyelinase family [Grosmannia clavigera kw1407] Length = 1091 Score = 35.5 bits (80), Expect = 7.5, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 21/70 (30%), Gaps = 16/70 (22%) Query: 220 GIRIDHIM--LSPEATSLLHSARIDT--------------KPRGWTKPSDHTPVIVSLDI 263 G R+D+I SP S+ I P SDH V +L + Sbjct: 903 GKRLDYIFYMSSPPIPPNADSSSIYHSWTVKTARVAMVEPHPTLGCSVSDHFAVEATLAL 962 Query: 264 PEPRKKQQDS 273 + S Sbjct: 963 EFNSQDSDAS 972 >gi|146181039|ref|XP_001022028.2| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena thermophila] gi|146144304|gb|EAS01783.2| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena thermophila SB210] Length = 449 Score = 35.5 bits (80), Expect = 7.5, Method: Composition-based stats. Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 5/30 (16%) Query: 9 WNVNSIRARIHNLAAWIKENNPDIICLQET 38 WN AR+ L IK +P I+CLQET Sbjct: 75 WN-----ARLDLLIKEIKFVDPTILCLQET 99 >gi|148670957|gb|EDL02904.1| angel homolog 1 (Drosophila) [Mus musculus] Length = 674 Score = 35.5 bits (80), Expect = 7.9, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 29/75 (38%), Gaps = 10/75 (13%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQ 62 + WN R NL + +PDI+CLQE ++ ++ + L+ + + + Sbjct: 276 ILNWN-----YRFANLMQEFQHWDPDILCLQEV--QEDHYWEQLEPSLRMMGFTCFYKRR 328 Query: 63 KSYNGVAILSKYQPI 77 Y+P Sbjct: 329 TGCKTDGCAVCYKPT 343 >gi|195977910|ref|YP_002123154.1| extracellular nuclease [Streptococcus equi subsp. zooepidemicus MGCS10565] gi|195974615|gb|ACG62141.1| extracellular nuclease [Streptococcus equi subsp. zooepidemicus MGCS10565] Length = 926 Score = 35.5 bits (80), Expect = 7.9, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 32/92 (34%), Gaps = 11/92 (11%) Query: 192 TDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT-- 249 + + H+ YS++ Y ++ + +D++++S + Sbjct: 793 MANLVSRHELSDRYSYF-YRGNNQT------LDNMLVSRNLLGRYEFDMVHVNSPFMEAH 845 Query: 250 -KPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280 + SDH P+++ L K S P Sbjct: 846 GRASDHDPLLLQLSF-GKDKPGAPSAQPKKTP 876 >gi|148223125|ref|NP_001090759.1| contactin associated protein 1 [Xenopus (Silurana) tropicalis] gi|124481572|gb|AAI33056.1| LOC100037844 protein [Xenopus (Silurana) tropicalis] Length = 1326 Score = 35.5 bits (80), Expect = 7.9, Method: Composition-based stats. Identities = 23/206 (11%), Positives = 39/206 (18%), Gaps = 11/206 (5%) Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123 + G S I + + + Y + K Sbjct: 556 EHGGRCYQSWDDFFCICDMTGYKGETCHKSLFKENCDAYRVSGKYSGNYTIDPDGSGPMK 615 Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183 I + + G P + + + Sbjct: 616 PFYVHCDISEERAWTIVHHDRYYATRVTGSSPDQPFLGEVNYWNATWGEVSALANGSEYC 675 Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG------IR----IDHIMLSPEAT 233 ++ + YSFW + G R ID P+ Sbjct: 676 EQRIEFSCYRSRLLNTPNGLPYSFWMGRNNERHFYWGGSSPGIQRCGCGIDKSCADPKLF 735 Query: 234 SLLH-SARIDTKPRGWTKPSDHTPVI 258 +G K DH PV Sbjct: 736 CNCDGDYTQWKYDKGLLKFRDHLPVT 761 >gi|160893950|ref|ZP_02074729.1| hypothetical protein CLOL250_01505 [Clostridium sp. L2-50] gi|156864328|gb|EDO57759.1| hypothetical protein CLOL250_01505 [Clostridium sp. L2-50] Length = 252 Score = 35.5 bits (80), Expect = 8.0, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 21/45 (46%), Gaps = 2/45 (4%) Query: 216 SKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 +K +G R+D+ + S + + + ID P DH VI+ Sbjct: 208 AKYRG-RLDYAIASEAVYASISNMEIDPMPMDCGMT-DHAAVIID 250 >gi|147771264|emb|CAN72019.1| hypothetical protein VITISV_001842 [Vitis vinifera] Length = 590 Score = 35.5 bits (80), Expect = 8.2, Method: Composition-based stats. Identities = 10/58 (17%), Positives = 24/58 (41%), Gaps = 7/58 (12%) Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260 +++ + + R+DH ++S + + + PR SDH P+++ Sbjct: 283 GPFTW----IGALNSQAAFRLDHFLISDQWEDHFSAITQSSLPR---MVSDHNPIVLE 333 >gi|238923041|ref|YP_002936554.1| hypothetical protein EUBREC_0631 [Eubacterium rectale ATCC 33656] gi|238874713|gb|ACR74420.1| Hypothetical protein EUBREC_0631 [Eubacterium rectale ATCC 33656] Length = 263 Score = 35.5 bits (80), Expect = 8.3, Method: Composition-based stats. Identities = 30/281 (10%), Positives = 72/281 (25%), Gaps = 39/281 (13%) Query: 4 VTVATWN------VNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57 + + WN +NS + + +N D++ L E + LN ++ Sbjct: 1 MRILFWNTHRNVDINSY------ILDIVNQNEIDVLVLAEY--------MAEINELNDNL 46 Query: 58 ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117 + C ++ +N + I + ++ L + Sbjct: 47 KQCKKRLFNWNTKGCERIHIWGNYIDVTPGEQNKYFSVQIVNKQYIMCGVHMYSNLNGEH 106 Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGD--YNIIPQPHDCYNPIIWENDACF 175 ++I + + ++ Q + + + Sbjct: 107 YDERVALAEEIMYSIKHIKQRLQTEHVIVIGDINESPYEKACLSAKGFHALPALQILDKG 166 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATS 234 + V + + Y Y +S N +D +++S Sbjct: 167 SRTVYGKEYEKMYNPMWNLFGDFKYPPGTY----YRVESKLYNPCWFMLDQVIISQSMIP 222 Query: 235 -----------LLHSARIDTKPRG-WTKPSDHTPVIVSLDI 263 + T R + SDH P++ +I Sbjct: 223 LMVKEQLKIITKCGKGVLYTDNRYPNSNISDHFPIMCEFNI 263 >gi|308504709|ref|XP_003114538.1| hypothetical protein CRE_27203 [Caenorhabditis remanei] gi|308261923|gb|EFP05876.1| hypothetical protein CRE_27203 [Caenorhabditis remanei] Length = 317 Score = 35.5 bits (80), Expect = 8.4, Method: Composition-based stats. Identities = 35/298 (11%), Positives = 74/298 (24%), Gaps = 53/298 (17%) Query: 4 VTVATWNV--------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55 + + T+N+ N + ++ NPD++ LQE N L + Sbjct: 30 IRLMTFNIWQSGANVENGQQKIAKHILMV----NPDVVALQEVYA---NVTRNLTLMLGH 82 Query: 56 -HIETCGQKSYNGVAILSKY---------------QPIEIVTHLPGDDLDVQARFIEATF 99 + Y AIL+++ I + T + + Sbjct: 83 PWVAVDRNHEYPDTAILTRHVVVPNTNLSTSGGVGAKIMLRTGYMIHFWSLHLDYTSYGP 142 Query: 100 TINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159 L + G + ++ + ++ + E+ I Sbjct: 143 YAANNKLVNKLDQIMAGENVGRGPQIYEVLDLPMMKKWIEKSDEI-PIFIAGDFNGPSHL 201 Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF---------WDY 210 I + ++ ++ F + + ++ W+Y Sbjct: 202 DWTEQTKKIHGDWVVRWPATKELEERKFTDTFREIYPNVVTNPGI-TWSTVNKFNPEWNY 260 Query: 211 YADSWSKNKGIRIDHIMLSPEATSL--LHSARIDTKPR-----GWTKPSDHTPVIVSL 261 RID + L + + R PSDH V Sbjct: 261 TIPEPQD----RIDFLFYRGPVVPYQILTYSGCEKPQRIPFHAHNDYPSDHFSVFADY 314 >gi|302346426|ref|YP_003814724.1| oxidoreductase, NAD-binding domain protein [Prevotella melaninogenica ATCC 25845] gi|302150879|gb|ADK97140.1| oxidoreductase, NAD-binding domain protein [Prevotella melaninogenica ATCC 25845] Length = 515 Score = 35.5 bits (80), Expect = 8.5, Method: Composition-based stats. Identities = 20/197 (10%), Positives = 47/197 (23%), Gaps = 9/197 (4%) Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 H G+ +++ + L + ++ + Sbjct: 74 HDAVERWTHIPGIQVMALCDYERDRAERCQEYLRKASMPAADIYSGEDGYKELCKRKDID 133 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 I + + +E+ + + +I + + C+ Sbjct: 134 LVYIAPDWKHHFLVAYEAMNNGKHVAVEVPAAMNLTEIWKLIDISEKKRLHCMMLENCCY 193 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYS-FWD-YYADSWSKNKGIRIDH-------I 226 S Q F + + H S FWD Y+ G R+D+ + Sbjct: 194 DFFELNSLNMAQKDVFGEILYVQGAYRHELSKFWDAYWKKDAQDKLGWRLDYNQKFRGDV 253 Query: 227 MLSPEATSLLHSARIDT 243 + + I Sbjct: 254 YATHGLGPIAQVLNIHR 270 >gi|291298919|ref|YP_003510197.1| hypothetical protein Snas_1397 [Stackebrandtia nassauensis DSM 44728] gi|290568139|gb|ADD41104.1| hypothetical protein Snas_1397 [Stackebrandtia nassauensis DSM 44728] Length = 160 Score = 35.5 bits (80), Expect = 8.5, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 21/52 (40%), Gaps = 3/52 (5%) Query: 213 DSWSKNKGIRIDHIMLSPEATSLLHSARIDTKP-RGWTKPSDHTPVIVSLDI 263 K G RID I+ + +H A I+T R SDH V + + Sbjct: 109 RPRPKPDGRRIDWIIATERFA--VHKAGINTWVTRHDNLCSDHWAVQAVVSL 158 >gi|288802525|ref|ZP_06407964.1| oxidoreductase, Gfo/Idh/MocA family [Prevotella melaninogenica D18] gi|288335053|gb|EFC73489.1| oxidoreductase, Gfo/Idh/MocA family [Prevotella melaninogenica D18] Length = 515 Score = 35.5 bits (80), Expect = 8.7, Method: Composition-based stats. Identities = 20/197 (10%), Positives = 47/197 (23%), Gaps = 9/197 (4%) Query: 56 HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115 H G+ +++ + L + ++ + Sbjct: 74 HDAVERWTHIPGIQVMALCDYERDRAERCQEYLRKASMPAADIYSGEDGYKELCKRKDID 133 Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 I + + +E+ + + +I + + C+ Sbjct: 134 LVYIAPDWKHHFLVAYEAMNNGKHVAVEVPAAMNLTEIWKLIDISEKKRLHCMMLENCCY 193 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYS-FWD-YYADSWSKNKGIRIDH-------I 226 S Q F + + H S FWD Y+ G R+D+ + Sbjct: 194 DFFELNSLNMAQKDVFGEILYVQGAYRHELSKFWDAYWKKDAQDKLGWRLDYNQKFRGDV 253 Query: 227 MLSPEATSLLHSARIDT 243 + + I Sbjct: 254 YATHGLGPIAQVLNIHR 270 >gi|147771823|emb|CAN71339.1| hypothetical protein VITISV_043792 [Vitis vinifera] Length = 719 Score = 35.5 bits (80), Expect = 8.7, Method: Composition-based stats. Identities = 11/60 (18%), Positives = 21/60 (35%), Gaps = 9/60 (15%) Query: 201 THHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259 +++ + N+ R+D ++SP PR DH P+I+ Sbjct: 19 QGGKFTW-----NEGHNNQAWARLDRFLVSPSWLDQFSRVTQSRLPRLIF---DHFPIIL 70 >gi|320104698|ref|YP_004180289.1| endonuclease/exonuclease/phosphatase [Isosphaera pallida ATCC 43644] gi|319751980|gb|ADV63740.1| Endonuclease/exonuclease/phosphatase [Isosphaera pallida ATCC 43644] Length = 375 Score = 35.5 bits (80), Expect = 8.8, Method: Composition-based stats. Identities = 36/258 (13%), Positives = 73/258 (28%), Gaps = 34/258 (13%) Query: 15 RARIHNLAAWIKEN--------NPDIICLQET---KTED---KNFPFETLQSLNYHIETC 60 RA H L + E PD++ L E + + E L+Y Sbjct: 106 RALAHKL-DLLAETLLAMNGGRGPDLLALVEVENRRAVELLRDRLHRELPPELHYRHLVH 164 Query: 61 GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120 + + + I + + + + + + Sbjct: 165 HDLTTGRRVEPAILSRLPINPARTRTFGQRRILQAVVEVDGDELAVLVAHWTSRLTDQEG 224 Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180 + + + ++ ++ A +RL ++ GD+N PQ + Sbjct: 225 TKRLEYGLACLEA--VEALRRLNPAADVLVMGDFNDHPQDRSLTEGLRAGPSPSAIDADG 282 Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI-DHIMLSPEATSLLHSA 239 F+ M + A ++W Y G I DH+++SP Sbjct: 283 TLFRLWNLMTLIEPGTAG-------TYW-YRG-------GWEILDHLVVSPGLVDQ-RGW 326 Query: 240 RIDTKPRGWTKPSDHTPV 257 ++ K SD P+ Sbjct: 327 QVLPKTLTLGDNSDRRPL 344 >gi|798882|emb|CAA89100.1| unknown [Saccharomyces cerevisiae] Length = 366 Score = 35.5 bits (80), Expect = 8.8, Method: Composition-based stats. Identities = 10/39 (25%), Positives = 18/39 (46%) Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63 +K+ PD++ LQE + NF E L + + + Sbjct: 8 LKKYRPDVVSLQEVDYNELNFWQENFHKLGFDVIFKRHE 46 >gi|71909379|ref|YP_286966.1| endonuclease/exonuclease/phosphatase [Dechloromonas aromatica RCB] gi|71849000|gb|AAZ48496.1| Endonuclease/exonuclease/phosphatase [Dechloromonas aromatica RCB] Length = 252 Score = 35.5 bits (80), Expect = 8.8, Method: Composition-based stats. Identities = 31/268 (11%), Positives = 72/268 (26%), Gaps = 34/268 (12%) Query: 3 VVTVATWNVN-SI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56 + + T+N++ R +H L ++ NPDI+ LQE + ++ + Sbjct: 5 TLHITTFNIHKGFSQFNRRMMVHELRERLRHLNPDIVFLQEV----QGLHLGHAENHDDW 60 Query: 57 IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116 ++ + S ++ + +R L + H Sbjct: 61 PDSPQHEFLAEDVWASCAYGQNMIYDHGHHGNAILSR-----------------LPILHS 103 Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176 + T + + + + + + + A T Sbjct: 104 HNQDVTHLQFEKRGLLHCQIELPEGPAAHCVCVHLSLFGYSRRKQMDALATYLDKTADPT 163 Query: 177 LEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWD-YYADSWSKNKGI-RIDHIMLSPEAT 233 + + A ++S A S+ + R+D I + Sbjct: 164 APLIIAGDFNDWGNRAGEHMARRLGLREVFSGPSGNPARSFPAAMPMFRLDRIYV-RGFD 222 Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSL 261 + + W+ SDH + L Sbjct: 223 --VKRTEVHHG-LPWSNISDHAALSAYL 247 >gi|317148498|ref|XP_001822371.2| endonuclease/exonuclease/phosphatase family protein [Aspergillus oryzae RIB40] Length = 325 Score = 35.5 bits (80), Expect = 8.9, Method: Composition-based stats. Identities = 28/274 (10%), Positives = 66/274 (24%), Gaps = 33/274 (12%) Query: 26 KENNPDIICLQETKTEDKNFP-------------FETLQSLNYHIETCGQKSYNGVAILS 72 + + ICLQE D+ E + +I + Sbjct: 46 RNQDA-FICLQEV-LHDQLIDIHSGLNREHSAASAEAGEDAWAYIGVGRDDGHEAGEYSP 103 Query: 73 KYQPIEIV---THLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKIS 129 + + + ++ + + + IG Sbjct: 104 IFYRPSVWQLRHWETVWLSETPHVPSKSWDAASIRIVTIGVFTHHTSRQTILAMNTHLDD 163 Query: 130 WIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNM 189 R A+ + + +G++ + + E + + L + Sbjct: 164 QGSRSRFEAAHIILRKIDEYESGEHKDVISAVFLTGDLNSEETQEAYSVLTGNESTLIDA 223 Query: 190 GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS---------LLHSAR 240 + H ++ + Y K RID+++L P + Sbjct: 224 AKAVDPVEHYGNHLTWTGFGY-----EKEDPSRIDYVLLGPRPMEVLNNGGQPWKVEGYS 278 Query: 241 IDTKPRGWTKP-SDHTPVIVSLDIPEPRKKQQDS 273 + SDH V+V + + + Sbjct: 279 VLANRFDDGVFNSDHRAVVVDMRLCSKTRTMDPR 312 >gi|225431045|ref|XP_002273981.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1044 Score = 35.5 bits (80), Expect = 8.9, Method: Composition-based stats. Identities = 17/141 (12%), Positives = 47/141 (33%), Gaps = 7/141 (4%) Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179 + + + + + EE G ++ +N I + + E+ Sbjct: 55 CMDGMRWVFTGVYGPVCRRDREVFWEELGSIKGLWSDPWCVGGDFNMIRYPEERRRGGEL 114 Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239 S ++ + +R L+++ + + R+D +++ E + + A Sbjct: 115 SASMRRFTEVVEDLELRDYPLQGGLFTWRGGLNNQFQ----SRLDRFLVTDEWDRMFNGA 170 Query: 240 RIDTKPRGWTKPSDHTPVIVS 260 + SDH P+++ Sbjct: 171 ---KQGILARPVSDHFPILLE 188 >gi|163310734|ref|NP_653107.2| protein angel homolog 1 [Mus musculus] gi|218563496|sp|Q8VCU0|ANGE1_MOUSE RecName: Full=Protein angel homolog 1 Length = 667 Score = 35.5 bits (80), Expect = 8.9, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 29/75 (38%), Gaps = 10/75 (13%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQ 62 + WN R NL + +PDI+CLQE ++ ++ + L+ + + + Sbjct: 269 ILNWN-----YRFANLMQEFQHWDPDILCLQEV--QEDHYWEQLEPSLRMMGFTCFYKRR 321 Query: 63 KSYNGVAILSKYQPI 77 Y+P Sbjct: 322 TGCKTDGCAVCYKPT 336 >gi|114654104|ref|XP_001163086.1| PREDICTED: angel homolog 1 isoform 1 [Pan troglodytes] gi|114654106|ref|XP_001163119.1| PREDICTED: angel homolog 1 isoform 2 [Pan troglodytes] Length = 624 Score = 35.5 bits (80), Expect = 8.9, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 29/78 (37%), Gaps = 16/78 (20%) Query: 6 VATWN---VNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIET 59 + WN VN L + +PDI+CLQE ++ ++ + L+ + + Sbjct: 226 ILNWNYRFVN--------LMQEFQHWDPDILCLQEV--QEDHYWEQLEPSLRMMGFTCFY 275 Query: 60 CGQKSYNGVAILSKYQPI 77 + Y+P Sbjct: 276 KRRTGCKTDGCAVCYKPT 293 >gi|37361844|gb|AAQ91035.1| LRRGT00079 [Rattus norvegicus] Length = 602 Score = 35.5 bits (80), Expect = 9.0, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 24/69 (34%), Gaps = 10/69 (14%) Query: 186 LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKP 245 + M TD R + Y+F+ ++SK IDHI+ + I Sbjct: 338 MSQMDLTDIYRTFYPKAKGYTFFSAPHGTFSK-----IDHIIGQKTGLNRYRKIEIIPCV 392 Query: 246 RGWTKPSDH 254 SDH Sbjct: 393 L-----SDH 396 >gi|84489269|ref|YP_447501.1| hypothetical protein Msp_0458 [Methanosphaera stadtmanae DSM 3091] gi|84372588|gb|ABC56858.1| hypothetical protein Msp_0458 [Methanosphaera stadtmanae DSM 3091] Length = 131 Score = 35.5 bits (80), Expect = 9.0, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 2/42 (4%) Query: 223 IDHIMLSPEATSLL-HSARIDTKPRGWTKPSDHTPVIVSLDI 263 ID++ PE + +RI+ SDH P+I +DI Sbjct: 91 IDYLFAKPELITSFDVGSRIEYAN-NEDNHSDHVPLIFEIDI 131 >gi|157823485|ref|NP_001102187.1| protein angel homolog 1 [Rattus norvegicus] gi|218563497|sp|B2RYM0|ANGE1_RAT RecName: Full=Protein angel homolog 1 gi|149025240|gb|EDL81607.1| angel homolog 1 (Drosophila) (predicted) [Rattus norvegicus] Length = 667 Score = 35.5 bits (80), Expect = 9.1, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 29/75 (38%), Gaps = 10/75 (13%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQ 62 + WN R NL + +PDI+CLQE ++ ++ + L+ + + + Sbjct: 269 ILNWN-----YRFANLMQEFQHWDPDILCLQEV--QEDHYWEQLEPSLRMMGFTCFYKRR 321 Query: 63 KSYNGVAILSKYQPI 77 Y+P Sbjct: 322 TGCKTDGCAVCYKPT 336 >gi|17512364|gb|AAH19148.1| Angel homolog 1 (Drosophila) [Mus musculus] Length = 667 Score = 35.5 bits (80), Expect = 9.1, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 29/75 (38%), Gaps = 10/75 (13%) Query: 6 VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQ 62 + WN R NL + +PDI+CLQE ++ ++ + L+ + + + Sbjct: 269 ILNWN-----YRFANLMQEFQHWDPDILCLQEV--QEDHYWEQLEPSLRMMGFTCFYKRR 321 Query: 63 KSYNGVAILSKYQPI 77 Y+P Sbjct: 322 TGCKTDGCAVCYKPT 336 >gi|38346716|emb|CAE04866.2| OSJNBa0086O06.14 [Oryza sativa Japonica Group] Length = 1205 Score = 35.5 bits (80), Expect = 9.1, Method: Composition-based stats. Identities = 22/148 (14%), Positives = 46/148 (31%), Gaps = 6/148 (4%) Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175 G + D++ + + A + EE + + + + Sbjct: 110 GELLGHETKTDQLLLMDKPHGRAEGDIIGEEERNDVDETRSLEEDPWLMIGDFNDAMWQI 169 Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF--WDYYAD-SWSKNKGIRIDHIMLSPEA 232 R + Q F + + + W Y + + N +R+D + SP Sbjct: 170 EHRSRVKHSERQMRDFREVLVECDLQDIGFQCVPWTYDNNQASPNNVKVRLDRAVASPVW 229 Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVS 260 ++ A I T SDH P+++ Sbjct: 230 RAMFDQANIMH---LTTACSDHVPLLLE 254 >gi|332020639|gb|EGI61046.1| hypothetical protein G5I_10736 [Acromyrmex echinatior] Length = 360 Score = 35.5 bits (80), Expect = 9.3, Method: Composition-based stats. Identities = 14/131 (10%), Positives = 34/131 (25%), Gaps = 13/131 (9%) Query: 132 KRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191 F+ L + + + D + Sbjct: 141 HDFVSLCETWLNEKGWDAVKDRIGELGEEDDGKDRCSKNKVIRNGGRDFVKRITKYGWHI 200 Query: 192 TDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP 251 + + Y++ + S ID+ +++ + RID Sbjct: 201 LNGRSRDNWEEK-YTYVEIRDSSV-------IDYALVNDNICDRIVEFRID-----ARVN 247 Query: 252 SDHTPVIVSLD 262 S+H P+ ++L+ Sbjct: 248 SNHMPLSLTLE 258 >gi|157737125|ref|YP_001489808.1| endonuclease/exonuclease/phosphatase [Arcobacter butzleri RM4018] gi|157698979|gb|ABV67139.1| endonuclease/exonuclease/phosphatase [Arcobacter butzleri RM4018] Length = 526 Score = 35.5 bits (80), Expect = 9.3, Method: Composition-based stats. Identities = 40/266 (15%), Positives = 70/266 (26%), Gaps = 39/266 (14%) Query: 34 CLQETKTED-KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQA 92 LQE + +D + L Y S G+ LSK + + + Sbjct: 79 GLQEIENKDLMQLLQKKLPKYKYFSFIKYPDSAVGLGFLSKVEIKNSSSIDVKFIDKLFR 138 Query: 93 RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG 152 +E TF +I N + P + + + R +L + I G Sbjct: 139 PILETTFIYENVEFKIFNNHWPSKAAAENYRIKYAKTLQDR-----LLKLPKDYDYILLG 193 Query: 153 DYNIIPQPHD-CYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFW--- 208 D+N + + + T + + T + Y+ W Sbjct: 194 DFNSNYNEFETFKKDLKLNLTSGVTGINHVLNTTIDDHFITYDDILKEEKKVHYNLWLDI 253 Query: 209 --DYYADSWSKNKGIRIDHIMLSPEATSL------LHSARIDT----------------- 243 + KN+ D+I+LS S + Sbjct: 254 KTSERFSTKFKNQNNTPDNIILSSSLFDNKNLTYIKKSFEVFKPNYLYENGEVKRWKMTQ 313 Query: 244 ----KPRGWTKPSDHTPVIVSLDIPE 265 K SDH P+ I + Sbjct: 314 DRNIKIHKGEGFSDHLPIFAKFSIND 339 >gi|145511109|ref|XP_001441482.1| hypothetical protein [Paramecium tetraurelia strain d4-2] gi|124408732|emb|CAK74085.1| unnamed protein product [Paramecium tetraurelia] Length = 2135 Score = 35.5 bits (80), Expect = 9.3, Method: Composition-based stats. Identities = 15/151 (9%), Positives = 30/151 (19%), Gaps = 1/151 (0%) Query: 44 NFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103 P++ NY + GV Q +I H+ + Sbjct: 1397 QIPYDGCFECNYQCQPECTDCQLGVCYKCGVQGWDIENHICFPVCGDGYVVKGQEQCDDG 1456 Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163 T+ ++ ++ F + + I + D Sbjct: 1457 NTVEFDGCFMCQYQCEEMCT-TCELGICYECDVFGWVIEQHKCTPYCGDGVVIGYEQCDD 1515 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDA 194 N + L Q Sbjct: 1516 MNDDFNDGCYKCKLACDQYCTDCLEGICQKC 1546 >gi|223999779|ref|XP_002289562.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220974770|gb|EED93099.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 1860 Score = 35.5 bits (80), Expect = 9.5, Method: Composition-based stats. Identities = 13/93 (13%), Positives = 25/93 (26%), Gaps = 13/93 (13%) Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230 + + + + Y+ +S R+D+I++ P Sbjct: 7 WVTNSHGKNQLADFMAAANLQDAFYERHQQSPPTYT----RGNS-------RLDYILVDP 55 Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263 A + G SDH V D+ Sbjct: 56 VALPCIRRVGYLGTHEGN--FSDHCLEYVDFDM 86 >gi|37718787|gb|AAR01658.1| putative inositol polyphosphate 5-phosphatase [Oryza sativa Japonica Group] Length = 336 Score = 35.5 bits (80), Expect = 9.5, Method: Composition-based stats. Identities = 42/282 (14%), Positives = 79/282 (28%), Gaps = 34/282 (12%) Query: 6 VATWNVNSIRARIHNLAAWIKEN-NPD--IICLQET-KTEDKNFPFETLQSLNYHIETCG 61 + TWN+N + + ++ + N D + LQE K + ET+ + + Sbjct: 54 IITWNMNG-KMSVEDVTKLVSSNRKFDLLVFGLQEVPKCDVAQVLQETMAETHILLCQKT 112 Query: 62 QKSYNGVAILSKYQPIEIVT---------HLPGDDLDVQARFIEATFTINTQTLRIGNLY 112 +S +K I G + + + + Sbjct: 113 MQSLQMFLFGAKSSEKYIRELKVDKHAVGGCGGIIGRKKGAVAMYINFSGIRMVFVSCHL 172 Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP---------HDC 163 H N + + + F + Q + + ++ GD N Q + Sbjct: 173 AAHENKVEKRNSECQHISHSLFSKNDIQYTKSADITVWLGDLNYRLQGISSIPARKLIEE 232 Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223 E + T + T+ + S +D + RI Sbjct: 233 NRQSKLRGKDQLLQEAEKGEVFNGYCEGTLLFKPTYKYNIGSSNYDTSYKIRVPSWTDRI 292 Query: 224 ----DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261 DH + ++L+S R SDH PV L Sbjct: 293 LFKVDH---TSGLDAVLNSYEALDCIRS----SDHKPVRAHL 327 >gi|313219842|emb|CBY30759.1| unnamed protein product [Oikopleura dioica] Length = 1616 Score = 35.1 bits (79), Expect = 9.6, Method: Composition-based stats. Identities = 15/171 (8%), Positives = 41/171 (23%), Gaps = 7/171 (4%) Query: 51 QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110 + + + E S + + I G + I T+ + Sbjct: 383 EGVGWSCEQEYCFSKSDCIYRCPHGTIC------GKANFWECSHPSECIHICTEEFNLDC 436 Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170 + + + ++ ++ P + + Sbjct: 437 RCPDEHSCLNPPCGMIDECTEDPEITCQDVFKWEINSHLYKCYFDGSPNYECLDDTWDYL 496 Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY-SFWDYYADSWSKNKG 220 + C+ E + + T Y ++ +Y+A + N G Sbjct: 497 QENCYPPECEPVPCTATFDNKERCVMGLNGTVDGYLTWDEYWAQYEAGNVG 547 >gi|294874344|ref|XP_002766909.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] gi|239868284|gb|EEQ99626.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983] Length = 1177 Score = 35.1 bits (79), Expect = 9.8, Method: Composition-based stats. Identities = 13/85 (15%), Positives = 29/85 (34%), Gaps = 1/85 (1%) Query: 188 NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRG 247 + + + +D +F + S ID M S + + ++D Sbjct: 340 DWAEKNGLHVINDCESPPTFRSHRTCSDGSIITSHIDVTMCSVDLVERVADWQVDWDDPS 399 Query: 248 WTKPSDHTPVIVSLDIPEPRKKQQD 272 SDH V V++ + +++ Sbjct: 400 SAV-SDHAAVKVAISLRLIARQEPP 423 >gi|195402333|ref|XP_002059761.1| GJ10044 [Drosophila virilis] gi|194155975|gb|EDW71159.1| GJ10044 [Drosophila virilis] Length = 765 Score = 35.1 bits (79), Expect = 9.8, Method: Composition-based stats. Identities = 22/205 (10%), Positives = 52/205 (25%), Gaps = 9/205 (4%) Query: 4 VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETK---------TEDKNFPFETLQSLN 54 + +A WN I + + A++ +N DI+ + E + D + L Sbjct: 154 LKMAYWNAAGISNKSREMEAFMHHHNVDIMMVIEIRQGTNRQSNPIRDIHANNAPLNIDG 213 Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114 YH +++ N + Q + ++ + + Sbjct: 214 YHTYVAKRRAPNQRSGGVATLNNPTRDQPTPPPTWQQQKHLQLQYICQPMHWAQHQQHKQ 273 Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174 + +++ + Q + L P W Sbjct: 274 LSAEHNMSIGLQHHPLVQQTAIWGLQNQQQWSTLAKNDQKLQQPDLWGHQLQRQWSMVTQ 333 Query: 175 FTLEVRQSFQKLQNMGFTDAIRATH 199 +Q Q +Q + + Sbjct: 334 TDSMGQQKNQPIQLHQYIGVQPQKN 358 >gi|302774036|ref|XP_002970435.1| hypothetical protein SELMODRAFT_411008 [Selaginella moellendorffii] gi|300161951|gb|EFJ28565.1| hypothetical protein SELMODRAFT_411008 [Selaginella moellendorffii] Length = 350 Score = 35.1 bits (79), Expect = 9.9, Method: Composition-based stats. Identities = 22/127 (17%), Positives = 39/127 (30%), Gaps = 7/127 (5%) Query: 148 LIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF 207 I AGD+N + D + II + S I +++ Sbjct: 61 WILAGDFNFVDHEEDKWGGIIQDRRTRAERLAWNSLLLWIGTCDAYEIPGFVTHEPRFTW 120 Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPR 267 ++ + R+D L+ + ID SDH P+ V+L R Sbjct: 121 REHQCRGIQR----RLDRFYLTMDLCMQGGKLDIDNTYTD---FSDHHPIRVTLPFQRSR 173 Query: 268 KKQQDST 274 ++ Sbjct: 174 GPRKPVA 180 Database: nr Posted date: May 13, 2011 4:10 AM Number of letters in database: 999,999,932 Number of sequences in database: 2,987,209 Database: /data/usr2/db/fasta/nr.01 Posted date: May 13, 2011 4:17 AM Number of letters in database: 999,998,956 Number of sequences in database: 2,896,973 Database: /data/usr2/db/fasta/nr.02 Posted date: May 13, 2011 4:23 AM Number of letters in database: 999,999,979 Number of sequences in database: 2,907,862 Database: /data/usr2/db/fasta/nr.03 Posted date: May 13, 2011 4:29 AM Number of letters in database: 999,999,513 Number of sequences in database: 2,932,190 Database: /data/usr2/db/fasta/nr.04 Posted date: May 13, 2011 4:33 AM Number of letters in database: 792,586,372 Number of sequences in database: 2,260,650 Lambda K H 0.309 0.124 0.406 Lambda K H 0.267 0.0384 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,961,136,773 Number of Sequences: 13984884 Number of extensions: 91584019 Number of successful extensions: 288319 Number of sequences better than 10.0: 7191 Number of HSP's better than 10.0 without gapping: 3850 Number of HSP's successfully gapped in prelim test: 3341 Number of HSP's that attempted gapping in prelim test: 271950 Number of HSP's gapped (non-prelim): 9640 length of query: 281 length of database: 4,792,584,752 effective HSP length: 137 effective length of query: 144 effective length of database: 2,876,655,644 effective search space: 414238412736 effective search space used: 414238412736 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 80 (35.5 bits)