BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780288|ref|YP_003064701.1| exodeoxyribonuclease III
protein [Candidatus Liberibacter asiaticus str. psy62]
         (281 letters)

Database: nr 
           13,984,884 sequences; 4,792,584,752 total letters

Searching..................................................done



>gi|254780288|ref|YP_003064701.1| exodeoxyribonuclease III protein [Candidatus Liberibacter asiaticus
           str. psy62]
 gi|254039965|gb|ACT56761.1| exodeoxyribonuclease III protein [Candidatus Liberibacter asiaticus
           str. psy62]
          Length = 281

 Score =  257 bits (655), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 281/281 (100%), Positives = 281/281 (100%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC
Sbjct: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT
Sbjct: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
           STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR
Sbjct: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR
Sbjct: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240

Query: 241 IDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
           IDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI
Sbjct: 241 IDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281


>gi|92117300|ref|YP_577029.1| exodeoxyribonuclease III (xth) [Nitrobacter hamburgensis X14]
 gi|91800194|gb|ABE62569.1| Exodeoxyribonuclease III [Nitrobacter hamburgensis X14]
          Length = 266

 Score =  239 bits (610), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 125/261 (47%), Positives = 175/261 (67%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+R R+ +L AW+ E  PD++CLQE K  D+ FP E +++L Y++ T GQK
Sbjct: 1   MRIATWNVNSVRQRLDHLLAWLGETAPDVVCLQEIKCVDEQFPREAIEALGYNVVTHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           ++NGVA+LSK+   E    L GDD DVQ+RF+E   ++    +RI  LYLP+GNP  + K
Sbjct: 61  TFNGVALLSKFPFDETRPRLAGDDGDVQSRFLEGVVSLKHGVVRIACLYLPNGNPPNTEK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ WI R + ++ +RL+ EE  + AGD+N+IP P D YNP  W +DA F  + R++F
Sbjct: 121 YPYKLKWISRLIEYSKERLKSEETFVLAGDFNVIPAPRDVYNPAAWVDDALFRPQTREAF 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q L  +G TDA+RA  D    Y+FWDY A +W KN G+RIDH++LSP+A+  L +  ID 
Sbjct: 181 QTLLGLGLTDALRAASDATGDYTFWDYQAGAWQKNNGLRIDHLLLSPQASDRLSAVGIDR 240

Query: 244 KPRGWTKPSDHTPVIVSLDIP 264
             RGW K SDH PV + LD+ 
Sbjct: 241 HVRGWEKASDHVPVWIDLDLD 261


>gi|110634038|ref|YP_674246.1| exodeoxyribonuclease III [Mesorhizobium sp. BNC1]
 gi|110285022|gb|ABG63081.1| Exodeoxyribonuclease III [Chelativorans sp. BNC1]
          Length = 262

 Score =  239 bits (610), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 137/260 (52%), Positives = 183/260 (70%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+N ++ARI NL  W++E NPDI+CLQE K+ D+ FP E +++L YH+ET GQK
Sbjct: 1   MKIATWNINGVKARIENLVHWLQEANPDIVCLQEIKSLDEQFPREPIEALGYHVETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVA+LSK +  E+   LPG+D D QARFIE  F+     LR+ +LYLP+GNPI S K
Sbjct: 61  GFNGVALLSKLRFDEVSRGLPGNDGDEQARFIEGVFSTEGGALRVASLYLPNGNPIASEK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K++W+ R   +A +RL LEEPL+ AGDYN+IP+P D  NP  W  DA +  E RQ+F
Sbjct: 121 FAYKLAWMDRLELWAKRRLMLEEPLVLAGDYNVIPEPADAKNPENWLGDALYQPESRQAF 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           ++L N+GFTDA+R+  +    Y+FWDY A +W KN GIRIDH+MLSPEA   + SA +  
Sbjct: 181 RRLCNLGFTDALRSATNEPGTYTFWDYQAGAWQKNNGIRIDHLMLSPEAADRIASASVQK 240

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
             R W KPSDH PV+V L I
Sbjct: 241 HTRAWEKPSDHVPVVVDLRI 260


>gi|75676002|ref|YP_318423.1| exodeoxyribonuclease III xth [Nitrobacter winogradskyi Nb-255]
 gi|74420872|gb|ABA05071.1| Exodeoxyribonuclease III [Nitrobacter winogradskyi Nb-255]
          Length = 266

 Score =  238 bits (606), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 127/260 (48%), Positives = 173/260 (66%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+R R+ +L  W++E  PD++CLQE K  D+ FP E +++L Y++ T GQK
Sbjct: 1   MRIATWNVNSVRQRLDHLITWLRETAPDVVCLQEIKCVDEQFPREAIEALGYNVVTHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           ++NGVA+LSK+   E    L GDD DVQARF+E   T+    +R+  LYLP+GNP  + K
Sbjct: 61  TFNGVALLSKFPFDETRPRLAGDDGDVQARFLEGVVTLEHGAVRVACLYLPNGNPPNTEK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ WI R + ++ +RL+ EE  I AGD+N+IP P D YN   W +DA F    RQ+F
Sbjct: 121 YPYKLKWISRLIEYSRERLKSEEAFILAGDFNVIPAPCDVYNSAAWVDDALFRPRTRQAF 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q L  +G TDA+RA  D    Y+FWDY A +W KN G+RIDH++LSP+A+  L  A ID 
Sbjct: 181 QTLLGLGLTDALRAVSDAAGEYTFWDYQAGAWQKNNGLRIDHLLLSPQASDRLSGAGIDR 240

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
             RGW K SDH PV + LD+
Sbjct: 241 HVRGWEKASDHVPVWIDLDL 260


>gi|85716516|ref|ZP_01047487.1| Exodeoxyribonuclease III xth [Nitrobacter sp. Nb-311A]
 gi|85696705|gb|EAQ34592.1| Exodeoxyribonuclease III xth [Nitrobacter sp. Nb-311A]
          Length = 279

 Score =  235 bits (599), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 126/262 (48%), Positives = 173/262 (66%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
            ++ +ATWNVNSIR R+ +L  W+ E  PD++CLQE K  D+ FP E +++L Y++ T G
Sbjct: 12  RLMRIATWNVNSIRQRLDHLITWLGETTPDVVCLQEIKCVDEQFPREAIEALGYNVVTHG 71

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           QK++NGVA+LSK+   E    L GDD DVQ+RF+E   ++    +RI  LYLP+GNP  +
Sbjct: 72  QKTFNGVALLSKFPFDETRPRLAGDDGDVQSRFLEGVVSLKQGIVRIACLYLPNGNPPNT 131

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            KY  K+ WI R + ++ +RL+ EE  + AGD+N+IP P D YNP  W +DA F    RQ
Sbjct: 132 EKYPYKLKWISRLIEYSKERLKSEEAFVLAGDFNVIPAPRDVYNPASWVDDALFRPHTRQ 191

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           +FQ L  +G TDA+RA  D    Y+FWDY A +W KN G+RIDH++LSP+A+  L    I
Sbjct: 192 AFQTLLGLGLTDALRAASDAAGEYTFWDYQAGAWQKNNGLRIDHLLLSPQASDRLGGVGI 251

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
           D   RGW K SDH PV + LD+
Sbjct: 252 DRHVRGWEKASDHVPVWIDLDL 273


>gi|83942567|ref|ZP_00955028.1| exodeoxyribonuclease III [Sulfitobacter sp. EE-36]
 gi|83846660|gb|EAP84536.1| exodeoxyribonuclease III [Sulfitobacter sp. EE-36]
          Length = 265

 Score =  235 bits (599), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 121/262 (46%), Positives = 162/262 (61%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           +V+ +AT+N+N I+ARI  L  W+ E  PD+  LQE K+ D+ FP E  +   Y++ET G
Sbjct: 4   AVMKIATFNINGIKARIDALPQWLDEAQPDVAILQEIKSVDEGFPRELFEDRGYNVETHG 63

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           QKS+NGVAILSK    ++   LPGD+ D QAR+IEAT   +  ++R+  LYLP+GNP   
Sbjct: 64  QKSFNGVAILSKLPLEDVTRGLPGDESDEQARYIEATVVGDHSSVRLCGLYLPNGNPAPG 123

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            KYD K++W++R    A   L  E P +  GD+NIIPQ  D   P  W  DA F  E R 
Sbjct: 124 PKYDYKLAWMQRLEDRARALLAEETPFLLTGDFNIIPQAEDAATPDAWREDALFRPESRA 183

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           ++++L  +G T+A RA       YSFWDY A +W++N GIRIDH +LSP     L   +I
Sbjct: 184 AWRRLLALGLTEAFRARTQGPGHYSFWDYQAGAWNRNNGIRIDHFLLSPAIADSLRDCQI 243

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
           D   RG  KPSDH PV V LD+
Sbjct: 244 DKDVRGREKPSDHVPVWVELDL 265


>gi|154253458|ref|YP_001414282.1| exodeoxyribonuclease III Xth [Parvibaculum lavamentivorans DS-1]
 gi|154157408|gb|ABS64625.1| exodeoxyribonuclease III Xth [Parvibaculum lavamentivorans DS-1]
          Length = 261

 Score =  234 bits (596), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 128/260 (49%), Positives = 177/260 (68%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A++NVNSI+AR+ NL  W+KE  PDI+CLQE K  D+NFP   ++ L Y++   GQK
Sbjct: 1   MKIASFNVNSIKARLTNLTDWLKEAEPDIVCLQELKCIDENFPHGPIEELGYNVAVNGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAILSK+   ++   LPG+D D  AR+IEA  + N   +R+ ++YLP+GNP+ + K
Sbjct: 61  TYNGVAILSKHPLEDVSRGLPGNDGDDHARYIEAVVSANGSVVRVASIYLPNGNPVDTDK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W+ R +  A + L  EEPL+ AGDYN+IP   D +NP  W NDA F  E R  F
Sbjct: 121 FTYKLGWMDRLIDHARELLSYEEPLVLAGDYNVIPTIDDVHNPAAWVNDALFRPETRAKF 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           ++L N+G TDA RA H   H Y+FWDY A +W+K+ GIRIDH++LSP+A  LL ++ ID 
Sbjct: 181 RELINLGLTDAFRACHREAHRYTFWDYQAGAWAKDNGIRIDHLLLSPQAADLLKASDIDR 240

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
             RG  KPSDH P+ V LD+
Sbjct: 241 AVRGREKPSDHVPIWVELDL 260


>gi|146340991|ref|YP_001206039.1| exodeoxyribonuclease III [Bradyrhizobium sp. ORS278]
 gi|146193797|emb|CAL77814.1| exodeoxyribonuclease III [Bradyrhizobium sp. ORS278]
          Length = 263

 Score =  232 bits (592), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 129/260 (49%), Positives = 170/260 (65%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSIR RI +L  W+KE +PDI+CLQE K  D  FP   +++L Y++ T GQK
Sbjct: 1   MRIATWNVNSIRQRIEHLVTWLKECSPDIVCLQEIKCTDDAFPRLEIEALGYNVVTHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           ++NGVA+LSK    E  + L GD  DV ARF+E   ++ +  +RI  LYLP+GNP  + K
Sbjct: 61  TFNGVALLSKLPFDETKSGLDGDAEDVHARFLEGVVSLKSGVVRIACLYLPNGNPPNTEK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W+ R   +A +RL+ EEPLI AGD+N+IP   D  NP  W  DA F  E R+SF
Sbjct: 121 YPYKLKWMSRLRDYARERLKTEEPLILAGDFNVIPAAADVSNPEAWVEDALFRPETRESF 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q L  +G TDA+RA +D    Y+FWDY A +W KN GIRIDH++LSP+A+  L    ID+
Sbjct: 181 QSLLGLGLTDALRAVNDAPGQYTFWDYQAGAWQKNAGIRIDHLLLSPQASDRLVEVGIDS 240

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
             R W KPSDH PV    D+
Sbjct: 241 YVRAWEKPSDHVPVWADFDL 260


>gi|227821924|ref|YP_002825894.1| exodeoxyribonuclease III protein [Sinorhizobium fredii NGR234]
 gi|227340923|gb|ACP25141.1| exodeoxyribonuclease III protein [Sinorhizobium fredii NGR234]
          Length = 319

 Score =  232 bits (592), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 141/261 (54%), Positives = 182/261 (69%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           M  + +ATWN+N ++AR+  L AW+K +NPDI CLQE K+ D  FP E +++L YHIET 
Sbjct: 57  MRPMKIATWNINGVKARLDGLVAWLKASNPDIACLQEIKSVDDAFPREEIEALGYHIETH 116

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           GQK +NGVA+LSK +P E+   LPGDD D Q+RFIE  F++    +R+  LYLP+GNP+ 
Sbjct: 117 GQKGFNGVALLSKLRPDEVNRGLPGDDSDEQSRFIEGVFSVAGGAVRVCCLYLPNGNPVG 176

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
           + KY  K+ W++R   FA +RL LEEPLI AGDYN+IP+ HDC++  +W NDA F  E R
Sbjct: 177 TEKYPYKLGWMQRLASFAKERLLLEEPLILAGDYNVIPEAHDCWDVNVWRNDALFLPETR 236

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            +F++L+N+G TDA+RAT D   LYSFWDY A  W KN GIRIDH+MLSPEA   L S  
Sbjct: 237 AAFRQLRNLGLTDAVRATTDEVPLYSFWDYQAGCWQKNFGIRIDHLMLSPEAVDKLVSTS 296

Query: 241 IDTKPRGWTKPSDHTPVIVSL 261
           I+   R W KPSDH PV    
Sbjct: 297 IEKHVRAWEKPSDHVPVAAQF 317


>gi|83953786|ref|ZP_00962507.1| exodeoxyribonuclease III [Sulfitobacter sp. NAS-14.1]
 gi|83841731|gb|EAP80900.1| exodeoxyribonuclease III [Sulfitobacter sp. NAS-14.1]
          Length = 265

 Score =  232 bits (592), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 120/260 (46%), Positives = 160/260 (61%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+N+N I+ARI  L  W+ +  PD+  LQE K+ D+ FP E  +   Y++ET GQK
Sbjct: 6   MKIATFNINGIKARIDALPQWLDDAQPDVAILQEIKSVDEGFPRELFEDRGYNVETHGQK 65

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           S+NGVAILSK    ++   LPGDD D QAR+IEAT   +  ++R+  LYLP+GNP    K
Sbjct: 66  SFNGVAILSKLPLEDVTRGLPGDDSDEQARYIEATVVGDHSSVRLCGLYLPNGNPAPGPK 125

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           YD K++W++R    A   L  E P +  GD+NIIPQ  D   P  W  DA F  E R ++
Sbjct: 126 YDYKLAWMQRLEDRARALLAEETPFLLTGDFNIIPQAEDAATPDAWREDALFRPESRAAW 185

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           ++L  +G T+A RA       YSFWDY A +W++N GIRIDH +LSP     L   +ID 
Sbjct: 186 RRLLALGLTEAFRARTQGPGHYSFWDYQAGAWNRNNGIRIDHFLLSPAIADSLRDCQIDK 245

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
             RG  KPSDH PV V LD+
Sbjct: 246 DVRGREKPSDHVPVWVELDL 265


>gi|83311632|ref|YP_421896.1| exonuclease III [Magnetospirillum magneticum AMB-1]
 gi|82946473|dbj|BAE51337.1| Exonuclease III [Magnetospirillum magneticum AMB-1]
          Length = 440

 Score =  232 bits (592), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 116/260 (44%), Positives = 162/260 (62%), Gaps = 5/260 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+RAR+ N+  W+    PD++ LQE K +D++FP   +Q+  YH    GQK
Sbjct: 185 LRIATWNVNSVRARLGNVLDWLGSFAPDVVLLQEIKCQDQDFPLLEIQAAGYHAAVHGQK 244

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           SYNGVAILS++   ++ T L GDD D QAR+IEAT        R+ +LYLP+GNP    K
Sbjct: 245 SYNGVAILSRHPMSDVRTRLSGDDSDEQARYIEATIGGW----RLASLYLPNGNPAPGDK 300

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +D K++W+ R    A   L    P +  GD+NI P   D Y+P  W +DA    + R ++
Sbjct: 301 FDYKLAWMARLRTHAQALLAQGIPFVLGGDFNICPTDDDVYDPPKWRDDALCRPDSRAAW 360

Query: 184 QKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           + + N+G T+A RA H      YSFWDY A +W +++G+RIDH +LSP+A   LH+  ID
Sbjct: 361 RSIVNLGLTEAFRALHPGEKGRYSFWDYQAGAWQRDEGLRIDHFLLSPQAADCLHACEID 420

Query: 243 TKPRGWTKPSDHTPVIVSLD 262
             PRG  K SDHTPV + L+
Sbjct: 421 KAPRGKEKASDHTPVWIELE 440


>gi|39935926|ref|NP_948202.1| exodeoxyribonuclease III [Rhodopseudomonas palustris CGA009]
 gi|39649780|emb|CAE28302.1| exodeoxyribonuclease III [Rhodopseudomonas palustris CGA009]
          Length = 303

 Score =  231 bits (589), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 130/260 (50%), Positives = 175/260 (67%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+R R+ +L +W+++  PD++CLQE K  D+ FP E +++L Y++ T GQK
Sbjct: 41  MRIATWNVNSVRQRLDHLVSWLQDCQPDVVCLQEIKCVDEAFPREPIEALGYNVVTHGQK 100

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           ++NGVA+LSKY   E    L GD+ DV ARF+E   ++    +R+  LYLP+GNP+ S K
Sbjct: 101 TFNGVALLSKYPLEEANPGLAGDESDVHARFLEGVVSLKHGVVRVACLYLPNGNPVGSEK 160

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+SW+ R   +A QRL+ EEPLI AGD+N+IPQ  D +NP  W  DA F  E R+SF
Sbjct: 161 YPYKLSWMARLRDYAQQRLKTEEPLILAGDFNVIPQAEDVHNPAAWTEDALFRPETRESF 220

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q L  +G TDA+RAT D    Y+FWDY A +W KN GIRIDH++LSP+A   L    ID+
Sbjct: 221 QTLLGLGLTDALRATTDAPGQYTFWDYQAGAWQKNWGIRIDHLLLSPQAADRLRHVGIDS 280

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
             R W KPSDH PV    D+
Sbjct: 281 YVRNWEKPSDHVPVWADFDL 300


>gi|328543967|ref|YP_004304076.1| Exodeoxyribonuclease III [Polymorphum gilvum SL003B-26A1]
 gi|326413711|gb|ADZ70774.1| Exodeoxyribonuclease III [Polymorphum gilvum SL003B-26A1]
          Length = 260

 Score =  230 bits (587), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 127/258 (49%), Positives = 172/258 (66%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+N ++ARI  + AW++E  PD+ CLQE K+ D+ FP +  + L Y++ T GQK
Sbjct: 1   MKIATWNINGVKARIDTVLAWLQEARPDVACLQEIKSVDEAFPCQPFEDLGYNVATHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVA+LSK    ++   LPGDD D QAR+IEA  + +   +R+G LYLP+GNP+ + K
Sbjct: 61  GFNGVALLSKRPLEDVRRGLPGDDGDEQARYIEACVSTDRGAVRVGCLYLPNGNPLGTDK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K++W+ R  R A+ RL  E+P +  GDYN+IP+P D  NP  W  DA F  E RQ F
Sbjct: 121 FPYKLAWMDRLRRHAALRLAEEQPFLLLGDYNVIPEPKDARNPQDWLGDALFQPESRQHF 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + L N+GFT+A+RA  D    Y+FWDY A +W KN GIRIDH++LSP+A  LL S  ID 
Sbjct: 181 RALVNLGFTEAVRACTDAADTYTFWDYQAGAWQKNNGIRIDHVLLSPQAGDLLASCGIDK 240

Query: 244 KPRGWTKPSDHTPVIVSL 261
             R W KPSDH PV V L
Sbjct: 241 HVRAWEKPSDHVPVWVEL 258


>gi|316933979|ref|YP_004108961.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris DX-1]
 gi|315601693|gb|ADU44228.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris DX-1]
          Length = 263

 Score =  230 bits (587), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 133/260 (51%), Positives = 176/260 (67%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+R R+ +L  W+K++  D++CLQE K  D+ FP E +++L Y++ T GQK
Sbjct: 1   MRIATWNVNSVRQRLDHLLTWLKDSQSDVVCLQEIKCVDEAFPREPIEALGYNVVTHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           ++NGVA+LSKY   E    L GDD DV ARF+E   ++    +R+  LYLP+GNP+ S K
Sbjct: 61  TFNGVALLSKYPLEEANPGLAGDDGDVHARFLEGVVSLKHGVVRVACLYLPNGNPVGSEK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+SW+ R   +A QRL  EEPLI AGD+N+IPQP D +NP  W  DA F  E R+SF
Sbjct: 121 YPYKLSWMARLRDYAQQRLRTEEPLILAGDFNVIPQPGDVHNPAAWTEDALFRPETRESF 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q L  +GFTDA+RAT D    Y+FWDY A +W KN G+RIDH++LSP+A   L    ID+
Sbjct: 181 QALLGLGFTDALRATTDAPGQYTFWDYQAGAWQKNWGLRIDHLLLSPQAADRLRHVGIDS 240

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
             R W KPSDH PV   LD+
Sbjct: 241 YVRNWEKPSDHVPVWADLDL 260


>gi|118589109|ref|ZP_01546516.1| exodeoxyribonuclease III [Stappia aggregata IAM 12614]
 gi|118438438|gb|EAV45072.1| exodeoxyribonuclease III [Stappia aggregata IAM 12614]
          Length = 260

 Score =  230 bits (587), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 124/258 (48%), Positives = 167/258 (64%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+N ++ARI  +  W+KE +PD+ CLQE K+ D+NFP +  + L Y +ET GQK
Sbjct: 1   MKIATWNINGVKARIDTVLEWLKEASPDVACLQEIKSVDENFPRQPFEDLGYAVETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVA+LSK    +I   LPG+D D QAR+IEA        +RIG LYLP+GNP+ + K
Sbjct: 61  GFNGVALLSKTPLDDIQRGLPGNDADEQARYIEARLATEKGPVRIGCLYLPNGNPLGTEK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W+ R +  A +RLE E P +  GDYN+IP P D  NP  W  DA F  E RQ F
Sbjct: 121 FSYKLEWMDRLITHAQKRLEEETPFLLLGDYNVIPDPVDAKNPQNWLEDALFQPESRQRF 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + L ++G T+A+R+  +    ++FWDY A +W KN GIRIDHI++SP+AT       ID 
Sbjct: 181 RALTHLGLTEAVRSCTEAPETFTFWDYQAGAWQKNNGIRIDHILMSPQATDRFSGCGIDK 240

Query: 244 KPRGWTKPSDHTPVIVSL 261
             RGW KPSDH PV V L
Sbjct: 241 HVRGWEKPSDHVPVWVKL 258


>gi|315122848|ref|YP_004063337.1| exodeoxyribonuclease III protein [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313496250|gb|ADR52849.1| exodeoxyribonuclease III protein [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 265

 Score =  230 bits (587), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 216/265 (81%), Positives = 242/265 (91%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           MS+VT+ATWNVNSIR RI N+  WI+ENNPDI+CLQETKTEDK FPFE +QSLNYHIETC
Sbjct: 1   MSLVTIATWNVNSIRVRIKNVITWIQENNPDIVCLQETKTEDKTFPFEAIQSLNYHIETC 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           GQKSYNGVAILSKYQPIE++  LPGDDLD QARFIEATFTIN+Q LRIGN+YLP+GNPI 
Sbjct: 61  GQKSYNGVAILSKYQPIEMIKKLPGDDLDEQARFIEATFTINSQILRIGNIYLPNGNPIA 120

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
           STKYD KISWIKRFL+FASQRLELEE LIFAGDYNI+PQP DC++ I+ +NDACFTLEVR
Sbjct: 121 STKYDYKISWIKRFLQFASQRLELEEALIFAGDYNIVPQPRDCHDSIMLQNDACFTLEVR 180

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           Q+FQKLQNMGFTDAIRAT+D HH+YSFWDY++DSW KNKG+RIDH+MLSPEAT+ LHSA 
Sbjct: 181 QAFQKLQNMGFTDAIRATNDAHHIYSFWDYFSDSWRKNKGMRIDHVMLSPEATTFLHSAY 240

Query: 241 IDTKPRGWTKPSDHTPVIVSLDIPE 265
           ID KPRG  KPSDHTPVIV+LDIPE
Sbjct: 241 IDKKPRGCVKPSDHTPVIVALDIPE 265


>gi|148255795|ref|YP_001240380.1| exodeoxyribonuclease III [Bradyrhizobium sp. BTAi1]
 gi|146407968|gb|ABQ36474.1| Exodeoxyribonuclease III [Bradyrhizobium sp. BTAi1]
          Length = 263

 Score =  230 bits (587), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 127/260 (48%), Positives = 167/260 (64%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+R RI +L  W+KE +PDI+CLQE K  D  FP   +++L Y++ T GQK
Sbjct: 1   MRIATWNVNSVRQRIEHLVTWLKECSPDIVCLQEIKCTDDAFPRLEIEALGYNVVTHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           ++NGVA+LSK    E  + L GD  DV ARF+E   ++    +RI  LYLP+GNP  + K
Sbjct: 61  TFNGVALLSKLPFDETRSGLDGDVEDVHARFLEGVVSLKHGVVRIACLYLPNGNPPNTEK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W+ R   +  +RL+ EEPLI AGD+N+IP   D  NP  W  DA F  E R+SF
Sbjct: 121 YPYKLKWMSRLRDYTRERLKTEEPLILAGDFNVIPAAADVSNPEAWVEDALFRPETRESF 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q L  +G TDA+RA  D    Y+FWDY A +W KN GIRIDH++LSP+A+  L    ID+
Sbjct: 181 QALLGLGLTDALRAVTDAPGQYTFWDYQAGAWQKNAGIRIDHLLLSPQASDRLVEVGIDS 240

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
             R W KPSDH PV    D+
Sbjct: 241 YVRAWEKPSDHVPVWADFDL 260


>gi|126725257|ref|ZP_01741099.1| exodeoxyribonuclease III [Rhodobacterales bacterium HTCC2150]
 gi|126704461|gb|EBA03552.1| exodeoxyribonuclease III [Rhodobacterales bacterium HTCC2150]
          Length = 259

 Score =  230 bits (586), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 124/259 (47%), Positives = 168/259 (64%), Gaps = 1/259 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A++N+N I+ARI+ L  W+ E  PD++ LQE K+ D+NFP E  + + Y +ET GQK
Sbjct: 1   MKIASFNINGIKARINALPEWLAEAKPDVVLLQEIKSVDENFPRELFEDMGYTVETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           S+NGVAILS+    +I   LPGDD D QAR+IEAT    T  +R+  LYLP+GNP+   K
Sbjct: 61  SFNGVAILSRLPLEDITRGLPGDDTDEQARWIEATVMGKTP-VRVCGLYLPNGNPVPGPK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           YD K++W+ R    A + LE+EEP + AGDYNIIPQ  D  +P +W  DA    E R ++
Sbjct: 120 YDYKLAWMDRLQARAVELLEIEEPFVVAGDYNIIPQDEDAKHPEVWVEDALARPESRAAY 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           ++L N+GFT+  R  +     YSFWDY   +W KN GIRIDH + SPE   L+   +ID+
Sbjct: 180 RRLLNLGFTEVFRTRNPGPGHYSFWDYQRGAWDKNDGIRIDHFLASPECADLVTDCQIDS 239

Query: 244 KPRGWTKPSDHTPVIVSLD 262
             RG  KPSDH PV + LD
Sbjct: 240 YVRGREKPSDHVPVWIELD 258


>gi|192291575|ref|YP_001992180.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris TIE-1]
 gi|192285324|gb|ACF01705.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris TIE-1]
          Length = 263

 Score =  230 bits (585), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 130/260 (50%), Positives = 175/260 (67%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+R R+ +L +W+++  PD++CLQE K  D+ FP E +++L Y++ T GQK
Sbjct: 1   MRIATWNVNSVRQRLDHLVSWLQDCQPDVVCLQEIKCVDEAFPREPIEALGYNVVTHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           ++NGVA+LSKY   E    L GD+ DV ARF+E   ++    +R+  LYLP+GNP+ S K
Sbjct: 61  TFNGVALLSKYPLEEANPGLAGDESDVHARFLEGVVSLKHGVVRVACLYLPNGNPVGSEK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+SW+ R   +A QRL+ EEPLI AGD+N+IPQ  D +NP  W  DA F  E R+SF
Sbjct: 121 YPYKLSWMARLRDYAQQRLKTEEPLILAGDFNVIPQAEDVHNPAAWTEDALFRPETRESF 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q L  +G TDA+RAT D    Y+FWDY A +W KN GIRIDH++LSP+A   L    ID+
Sbjct: 181 QTLLGLGLTDALRATTDAPGQYTFWDYQAGAWQKNWGIRIDHLLLSPQAADRLRHVGIDS 240

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
             R W KPSDH PV    D+
Sbjct: 241 YVRNWEKPSDHVPVWADFDL 260


>gi|254469887|ref|ZP_05083292.1| exodeoxyribonuclease III [Pseudovibrio sp. JE062]
 gi|211961722|gb|EEA96917.1| exodeoxyribonuclease III [Pseudovibrio sp. JE062]
          Length = 260

 Score =  229 bits (584), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 122/258 (47%), Positives = 170/258 (65%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A+WN+N ++AR+  +  W++E  PD+ C QE K+ D+NFP    + L Y++ET GQK
Sbjct: 1   MKIASWNINGVKARLETVLKWLEEEQPDVACFQEIKSVDENFPRAPFEELGYNLETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVAILSK    E+   LPGD+ D QAR+IEA    N + +R+G LYLP+GNP+ + K
Sbjct: 61  GFNGVAILSKRPFEEVNRRLPGDEQDEQARYIEAVIAGNNEPIRVGCLYLPNGNPVETEK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W+ R  + A ++LE EE  +  GDYN+IP+P D   P  W  DA F  E RQ F
Sbjct: 121 FPYKLRWMDRLHKHAEKQLEKEEAFLLVGDYNVIPEPEDAKKPEAWVGDALFRPESRQRF 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + L N+GFT+A+RAT+     Y+FWDY A +W ++ GIRIDH++LSPEA  ++    ID 
Sbjct: 181 RALLNLGFTEAVRATNSNAGTYTFWDYQAGAWQRDNGIRIDHLLLSPEAARIMQGVGIDK 240

Query: 244 KPRGWTKPSDHTPVIVSL 261
             RGW KPSDH PV V L
Sbjct: 241 HVRGWEKPSDHVPVWVEL 258


>gi|299134949|ref|ZP_07028140.1| exodeoxyribonuclease III [Afipia sp. 1NLS2]
 gi|298589926|gb|EFI50130.1| exodeoxyribonuclease III [Afipia sp. 1NLS2]
          Length = 260

 Score =  229 bits (583), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 128/259 (49%), Positives = 171/259 (66%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+R R+ +L  W+KE  PD++CLQE K  D+ FP E +++L Y++ T GQK
Sbjct: 1   MRIATWNVNSVRQRLDHLLTWLKEREPDLVCLQEIKCLDEAFPREPIEALGYNVVTHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           ++NGVA+LSKY+  E    L GD  D+ ARF+E   +    T R+  LYLP+GNP+ + K
Sbjct: 61  TFNGVALLSKYRFEETRPQLAGDPEDLHARFLEGVVSHKDGTFRLACLYLPNGNPVNTEK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W+ R + +A +RL+ EEP + AGD+N+IP P D YNP  W  DA F  + R  F
Sbjct: 121 YPYKLRWMDRLIEYARERLKSEEPFVLAGDFNVIPTPADVYNPQAWLEDALFLPQTRDKF 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q L N+G TDA RAT D    Y+FWDY A +W KN GIRIDH+++SP A+  L +A ID 
Sbjct: 181 QTLLNLGLTDAFRATSDAPRQYTFWDYQAGAWQKNNGIRIDHLLMSPPASDRLKAAGIDK 240

Query: 244 KPRGWTKPSDHTPVIVSLD 262
             RGW K SDH PV   LD
Sbjct: 241 HVRGWEKASDHVPVWADLD 259


>gi|294852226|ref|ZP_06792899.1| exodeoxyribonuclease III [Brucella sp. NVSL 07-0026]
 gi|294820815|gb|EFG37814.1| exodeoxyribonuclease III [Brucella sp. NVSL 07-0026]
          Length = 260

 Score =  229 bits (583), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 141/260 (54%), Positives = 190/260 (73%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+N ++ARI NL  W++E++PDI+CLQE K+ D+ FP   +++L YH+ET GQK
Sbjct: 1   MKIATWNINGVKARIDNLQHWLRESSPDIVCLQEIKSVDEQFPRLEIEALGYHVETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVA+LSK  P EI   LPGDD D QARFIE  ++ +T  +R+ +LYLP+GNPI + K
Sbjct: 61  GFNGVALLSKKSPDEINKGLPGDDSDEQARFIEGIYSTDTGVVRVVSLYLPNGNPIDTEK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+SW++R   +A +RL LEEPL+ AGDYN+IP+P    NP  W  DA F  + RQ+F
Sbjct: 121 FPYKLSWMQRLENWAKKRLTLEEPLVLAGDYNVIPEPVGARNPQAWLGDALFQPQSRQAF 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           ++L+N+GFTDAIRA+ D   +YSFWDY A +W KN GIRIDH+MLSPEAT+   SA I+ 
Sbjct: 181 RRLENLGFTDAIRASTDESGVYSFWDYQAGAWQKNNGIRIDHLMLSPEATNRFISANIEK 240

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
             R W KPSDH PV V+L +
Sbjct: 241 HVRAWEKPSDHVPVTVTLAV 260


>gi|241204407|ref|YP_002975503.1| exodeoxyribonuclease III Xth [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240858297|gb|ACS55964.1| exodeoxyribonuclease III Xth [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 263

 Score =  229 bits (583), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 142/260 (54%), Positives = 192/260 (73%), Gaps = 1/260 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+N ++ARI NL  W+K+++PDI+CLQE KT D+ FP   +++L YH+ET GQK
Sbjct: 1   MKIATWNINGVKARIDNLTQWLKDSDPDIVCLQEIKTVDEGFPRLEIEALGYHVETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL-RIGNLYLPHGNPITST 122
            +NGVAILSK  P E+   LPGD LD QARF+EA FT++   + R+  LYLP+GNP+ + 
Sbjct: 61  GFNGVAILSKNSPFEVNRGLPGDPLDEQARFLEAAFTLSDTRILRVCCLYLPNGNPVETE 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           KY  K++W++R   FA++RL  EE L+ AGDYN+IP+PHDC++P +WENDA F  + R++
Sbjct: 121 KYPYKLAWMERLRTFAAERLAYEEMLVLAGDYNVIPEPHDCFDPKVWENDALFLPQTREA 180

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F++L+N+G TDA+RAT D   LYSFWDY A +W KN GIRIDH++LSPEA   + SA I+
Sbjct: 181 FRRLENLGLTDALRATTDATQLYSFWDYQAGAWPKNNGIRIDHLLLSPEAADRMTSAAIE 240

Query: 243 TKPRGWTKPSDHTPVIVSLD 262
              R W KPSDH PVI   D
Sbjct: 241 KHVRAWEKPSDHVPVIAYFD 260


>gi|163746501|ref|ZP_02153859.1| exodeoxyribonuclease III, putative [Oceanibulbus indolifex HEL-45]
 gi|161380386|gb|EDQ04797.1| exodeoxyribonuclease III, putative [Oceanibulbus indolifex HEL-45]
          Length = 260

 Score =  229 bits (583), Expect = 4e-58,   Method: Composition-based stats.
 Identities = 125/260 (48%), Positives = 161/260 (61%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A++N+N I+AR   L  W+ E  PD++ LQE K+ D+ FP E L+   Y++ET GQK
Sbjct: 1   MKIASFNINGIKARAAALPEWLDEAQPDVVVLQEIKSVDEAFPREMLEERGYNVETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           S+NGVAILSK    ++   LPGDD D QAR+IEAT   +   LR+  LYLP+GNP+   K
Sbjct: 61  SFNGVAILSKLPLEDVTRGLPGDDEDDQARWIEATVVGDDMALRVCGLYLPNGNPVPGPK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           YD K++W+ R    A   L  E P + AGDYNIIPQ  D   P  W  DA F  E R ++
Sbjct: 121 YDYKLAWMARLQARAEALLAEETPFLMAGDYNIIPQAEDAAKPDSWREDALFRPESRAAW 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           ++L N+G TDA RA       YSFWDY A +W++N GIRIDH +LSP     L   +ID 
Sbjct: 181 RRLVNLGLTDAFRARTQGPGHYSFWDYQAGAWNRNNGIRIDHFLLSPTVADRLRDCQIDR 240

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
             RG  KPSDH PV V L I
Sbjct: 241 DVRGRDKPSDHVPVWVELAI 260


>gi|150396373|ref|YP_001326840.1| exodeoxyribonuclease III Xth [Sinorhizobium medicae WSM419]
 gi|150027888|gb|ABR60005.1| exodeoxyribonuclease III Xth [Sinorhizobium medicae WSM419]
          Length = 263

 Score =  228 bits (582), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 142/258 (55%), Positives = 183/258 (70%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+N ++AR+  L  W+KE+NPDI CLQE K+ D  FP   ++SL YH+ET GQK
Sbjct: 1   MKIATWNINGVKARLDGLVGWLKESNPDIACLQEIKSIDDAFPRGEIESLGYHVETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVA+LSK +P E+   LPGD  D Q+RFIE  F++N   LR+  LYLP+GNP+ + K
Sbjct: 61  GFNGVALLSKLRPDEVNRGLPGDASDEQSRFIEGVFSVNGGALRVCCLYLPNGNPVETEK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K++W++R   FA QRL LEEPLI AGDYN+IP+PHDC++  +W NDA +  E R +F
Sbjct: 121 YPYKLAWMRRLAAFAEQRLMLEEPLILAGDYNVIPEPHDCWDVKVWRNDALYLPETRAAF 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           ++L+N+GFTDA+RAT D   LYSFWDY A  W KN GIRIDH+MLSPEA   L S  I+ 
Sbjct: 181 RRLRNLGFTDAVRATSDEAPLYSFWDYQAGCWPKNLGIRIDHLMLSPEAADKLVSTSIEK 240

Query: 244 KPRGWTKPSDHTPVIVSL 261
             R W KPSDH PV    
Sbjct: 241 HVRSWEKPSDHVPVTAEF 258


>gi|85703273|ref|ZP_01034377.1| exodeoxyribonuclease III [Roseovarius sp. 217]
 gi|85672201|gb|EAQ27058.1| exodeoxyribonuclease III [Roseovarius sp. 217]
          Length = 260

 Score =  228 bits (582), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 125/259 (48%), Positives = 165/259 (63%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+N+N I+ARI  L AW+ E  PD++ LQE K+ D  FP E  + L Y++ET GQK
Sbjct: 1   MKIATFNINGIKARIDALPAWLDEAAPDVVLLQEIKSVDDGFPREIFEDLGYNVETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVAILSK    ++   LPGDD D QAR+IEAT   + + LR+  LYLP+GNP    K
Sbjct: 61  GFNGVAILSKRPLEDVTRGLPGDDTDEQARWIEATVMGDHRALRLCGLYLPNGNPTPGPK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           YD K++W++R    A   L  EEP++  GDYNIIPQ  D   P  W  DA    E R +F
Sbjct: 121 YDYKLAWMERLQARARDLLASEEPVLMGGDYNIIPQDEDAARPEAWREDALALPESRAAF 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           +++ N+GFT+A RA       Y+FWDY A +W+KN GIRIDH +LSP+A  LL    ID 
Sbjct: 181 RRILNLGFTEAFRARVQGPGHYTFWDYQAGAWNKNDGIRIDHFLLSPQAADLLTDCGIDK 240

Query: 244 KPRGWTKPSDHTPVIVSLD 262
           + R   KPSDH P+ V +D
Sbjct: 241 EIRARDKPSDHVPLWVEID 259


>gi|23501759|ref|NP_697886.1| exodeoxyribonuclease III [Brucella suis 1330]
 gi|161618833|ref|YP_001592720.1| exodeoxyribonuclease III (xth) [Brucella canis ATCC 23365]
 gi|225627361|ref|ZP_03785398.1| exodeoxyribonuclease III Xth [Brucella ceti str. Cudo]
 gi|225852385|ref|YP_002732618.1| exodeoxyribonuclease III Xth [Brucella melitensis ATCC 23457]
 gi|254701637|ref|ZP_05163465.1| exodeoxyribonuclease III Xth [Brucella suis bv. 5 str. 513]
 gi|254704180|ref|ZP_05166008.1| exodeoxyribonuclease III Xth [Brucella suis bv. 3 str. 686]
 gi|254706917|ref|ZP_05168745.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis M163/99/10]
 gi|254709975|ref|ZP_05171786.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis B2/94]
 gi|254713975|ref|ZP_05175786.1| exodeoxyribonuclease III Xth [Brucella ceti M644/93/1]
 gi|256031468|ref|ZP_05445082.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis M292/94/1]
 gi|256044546|ref|ZP_05447450.1| exodeoxyribonuclease III Xth [Brucella melitensis bv. 1 str. Rev.1]
 gi|256060978|ref|ZP_05451136.1| exodeoxyribonuclease III Xth [Brucella neotomae 5K33]
 gi|256113411|ref|ZP_05454260.1| exodeoxyribonuclease III Xth [Brucella melitensis bv. 3 str. Ether]
 gi|256159594|ref|ZP_05457356.1| exodeoxyribonuclease III Xth [Brucella ceti M490/95/1]
 gi|256254874|ref|ZP_05460410.1| exodeoxyribonuclease III Xth [Brucella ceti B1/94]
 gi|256264117|ref|ZP_05466649.1| exodeoxyribonuclease III [Brucella melitensis bv. 2 str. 63/9]
 gi|256369301|ref|YP_003106809.1| exodeoxyribonuclease III [Brucella microti CCM 4915]
 gi|260168602|ref|ZP_05755413.1| exodeoxyribonuclease III [Brucella sp. F5/99]
 gi|261222058|ref|ZP_05936339.1| exodeoxyribonuclease III Xth [Brucella ceti B1/94]
 gi|261314381|ref|ZP_05953578.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis M163/99/10]
 gi|261317523|ref|ZP_05956720.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis B2/94]
 gi|261321730|ref|ZP_05960927.1| exodeoxyribonuclease III Xth [Brucella ceti M644/93/1]
 gi|261324980|ref|ZP_05964177.1| exodeoxyribonuclease III Xth [Brucella neotomae 5K33]
 gi|261752190|ref|ZP_05995899.1| exodeoxyribonuclease III Xth [Brucella suis bv. 5 str. 513]
 gi|261754849|ref|ZP_05998558.1| exodeoxyribonuclease III Xth [Brucella suis bv. 3 str. 686]
 gi|265988558|ref|ZP_06101115.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis M292/94/1]
 gi|265990972|ref|ZP_06103529.1| exodeoxyribonuclease III Xth [Brucella melitensis bv. 1 str. Rev.1]
 gi|265994809|ref|ZP_06107366.1| exodeoxyribonuclease III Xth [Brucella melitensis bv. 3 str. Ether]
 gi|265998023|ref|ZP_06110580.1| exodeoxyribonuclease III Xth [Brucella ceti M490/95/1]
 gi|23347687|gb|AAN29801.1| exodeoxyribonuclease III [Brucella suis 1330]
 gi|161335644|gb|ABX61949.1| exodeoxyribonuclease III (xth) [Brucella canis ATCC 23365]
 gi|225617366|gb|EEH14411.1| exodeoxyribonuclease III Xth [Brucella ceti str. Cudo]
 gi|225640750|gb|ACO00664.1| exodeoxyribonuclease III Xth [Brucella melitensis ATCC 23457]
 gi|255999461|gb|ACU47860.1| exodeoxyribonuclease III [Brucella microti CCM 4915]
 gi|260920642|gb|EEX87295.1| exodeoxyribonuclease III Xth [Brucella ceti B1/94]
 gi|261294420|gb|EEX97916.1| exodeoxyribonuclease III Xth [Brucella ceti M644/93/1]
 gi|261296746|gb|EEY00243.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis B2/94]
 gi|261300960|gb|EEY04457.1| exodeoxyribonuclease III Xth [Brucella neotomae 5K33]
 gi|261303407|gb|EEY06904.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis M163/99/10]
 gi|261741943|gb|EEY29869.1| exodeoxyribonuclease III Xth [Brucella suis bv. 5 str. 513]
 gi|261744602|gb|EEY32528.1| exodeoxyribonuclease III Xth [Brucella suis bv. 3 str. 686]
 gi|262552491|gb|EEZ08481.1| exodeoxyribonuclease III Xth [Brucella ceti M490/95/1]
 gi|262765922|gb|EEZ11711.1| exodeoxyribonuclease III Xth [Brucella melitensis bv. 3 str. Ether]
 gi|263001756|gb|EEZ14331.1| exodeoxyribonuclease III Xth [Brucella melitensis bv. 1 str. Rev.1]
 gi|263094335|gb|EEZ18180.1| exodeoxyribonuclease III [Brucella melitensis bv. 2 str. 63/9]
 gi|264660755|gb|EEZ31016.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis M292/94/1]
 gi|326408891|gb|ADZ65956.1| exodeoxyribonuclease III Xth [Brucella melitensis M28]
          Length = 260

 Score =  228 bits (582), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 142/260 (54%), Positives = 191/260 (73%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+N ++ARI NL  W++E++PDI+CLQE K+ D+ FP   +++L YH+ET GQK
Sbjct: 1   MKIATWNINGVKARIDNLQHWLRESSPDIVCLQEIKSVDEQFPRLEIEALGYHVETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVA+LSK  P EI   LPGDD D QARFIE  ++ +T  +R+ +LYLP+GNPI + K
Sbjct: 61  GFNGVALLSKKSPDEINKGLPGDDSDEQARFIEGIYSTDTGVVRVVSLYLPNGNPIDTEK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+SW++R   +A +RL LEEPL+ AGDYN+IP+P D  NP  W  DA F  + RQ+F
Sbjct: 121 FPYKLSWMQRLENWAKKRLTLEEPLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAF 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           ++L+N+GFTDAIRA+ D   +YSFWDY A +W KN GIRIDH+MLSPEAT+   SA I+ 
Sbjct: 181 RRLENLGFTDAIRASTDESGVYSFWDYQAGAWQKNNGIRIDHLMLSPEATNRFISANIEK 240

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
             R W KPSDH PV V+L +
Sbjct: 241 HVRAWEKPSDHVPVTVTLAV 260


>gi|254718977|ref|ZP_05180788.1| exodeoxyribonuclease III Xth [Brucella sp. 83/13]
 gi|265983967|ref|ZP_06096702.1| exodeoxyribonuclease III Xth [Brucella sp. 83/13]
 gi|264662559|gb|EEZ32820.1| exodeoxyribonuclease III Xth [Brucella sp. 83/13]
          Length = 260

 Score =  228 bits (582), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 141/260 (54%), Positives = 190/260 (73%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+N ++ARI NL  W++E++PDI+CLQE K+ D+ FP   +++L YH+ET GQK
Sbjct: 1   MKIATWNINGVKARIDNLQHWLRESSPDIVCLQEIKSVDEQFPRLEIEALGYHVETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVA+LSK  P EI   LPGDD D QARFIE  ++ +   +R+ +LYLP+GNPI + K
Sbjct: 61  GFNGVALLSKKSPDEINKGLPGDDSDEQARFIEGVYSTDNGVVRVVSLYLPNGNPIDTEK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+SW++R   +A +RL LEEPL+ AGDYN+IP+P D  NP  W  DA F  + RQ+F
Sbjct: 121 FPYKLSWMQRLENWAKERLTLEEPLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAF 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           ++L+N+GFTDAIRA+ D   +YSFWDY A +W KN GIRIDH+MLSPEAT+   SA I+ 
Sbjct: 181 RRLENLGFTDAIRASTDESGVYSFWDYQAGAWQKNNGIRIDHLMLSPEATNRFISANIEK 240

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
             R W KPSDH PV V+L +
Sbjct: 241 HVRAWEKPSDHVPVTVTLAV 260


>gi|298291878|ref|YP_003693817.1| exodeoxyribonuclease III [Starkeya novella DSM 506]
 gi|296928389|gb|ADH89198.1| exodeoxyribonuclease III [Starkeya novella DSM 506]
          Length = 262

 Score =  228 bits (582), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 128/258 (49%), Positives = 171/258 (66%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS++ R+ +  AW+ E  PD++CLQE K  D+ FP E  +SL Y++   GQK
Sbjct: 1   MRIATWNVNSVKQRLEHAVAWLGETRPDVVCLQEIKCVDEAFPREAFESLGYNVAVHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVA+LS+    E+ + LPGDD DVQ+RFIE   +      RI  +YLP+GNP+ + K
Sbjct: 61  GFNGVAVLSRLPFDEVSSGLPGDDEDVQSRFIEVVVSTPEGVARICGIYLPNGNPVDTEK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K++W+KR     + RL  EEPLI  GDYN+IP+P D  NP  W NDA F  + R +F
Sbjct: 121 YPYKLNWMKRLKAHVANRLAYEEPLIVCGDYNVIPEPVDAANPAAWVNDALFLPQTRSAF 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           ++L ++G T+A+RAT D   LYSFWDY A +W KN GIRIDH++LSP+A   L +  ID 
Sbjct: 181 RELIHLGMTEAVRATTDEPGLYSFWDYQAGAWQKNNGIRIDHLLLSPQAADRLKAVGIDK 240

Query: 244 KPRGWTKPSDHTPVIVSL 261
             R W KPSDH PV V L
Sbjct: 241 HVRAWEKPSDHVPVWVDL 258


>gi|27379872|ref|NP_771401.1| exonuclease III [Bradyrhizobium japonicum USDA 110]
 gi|27353025|dbj|BAC50026.1| exonuclease III [Bradyrhizobium japonicum USDA 110]
          Length = 273

 Score =  228 bits (582), Expect = 5e-58,   Method: Composition-based stats.
 Identities = 132/260 (50%), Positives = 174/260 (66%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + VATWNVNS+R RI  L  W+KE  PDI+CLQE K  D+ FP   +++L Y++ T GQK
Sbjct: 11  IRVATWNVNSVRQRIDLLLTWLKECQPDIVCLQEIKCVDEAFPRLEIEALGYNVVTHGQK 70

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           ++NGVA+LSK +  E  + L GDD D  ARF+E   T+    LRI  LYLP+GNP+ + K
Sbjct: 71  TFNGVALLSKLRFDETKSGLAGDDEDAHARFLEGVVTLKHGVLRIACLYLPNGNPVGTEK 130

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W+ R L ++ +RL+ EEPLI AGD+N+IP   D +NP  W  DA F  E R+SF
Sbjct: 131 YPYKLKWMSRLLEYSKERLKTEEPLILAGDFNVIPHARDVHNPAAWTEDALFKTETRESF 190

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q L  +G TDA+RA  D   LY+FWDY A +W KN G+RIDH++LSP+A+  L +  ID+
Sbjct: 191 QSLLGLGLTDALRAVTDEPGLYTFWDYQAGAWQKNHGLRIDHLLLSPQASDRLANVGIDS 250

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
             R W KPSDH PV   LD+
Sbjct: 251 YVRAWEKPSDHVPVWADLDL 270


>gi|307946864|ref|ZP_07662199.1| exodeoxyribonuclease III [Roseibium sp. TrichSKD4]
 gi|307770528|gb|EFO29754.1| exodeoxyribonuclease III [Roseibium sp. TrichSKD4]
          Length = 260

 Score =  228 bits (581), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 127/258 (49%), Positives = 176/258 (68%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+N ++AR+  + AW++E  P+I CLQE K+ D+NFP E ++ L Y+++T GQK
Sbjct: 1   MKIATWNINGVKARLDTVLAWLQEAEPEIACLQEIKSVDENFPREAIEELGYNVKTHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           S+NGVA+LS     ++   LPGDD D QARFIE T + +   +R+G LYLP+GNP+ + K
Sbjct: 61  SFNGVALLSNRPLEDVQRGLPGDDSDEQARFIEGTVSTDNGVVRVGCLYLPNGNPLGTEK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W+ R +  A +RL+ E P +  GDYN+IP P D  NP  W NDA F  E RQ F
Sbjct: 121 FPYKLGWMDRLIAHAKRRLDDEIPYLLLGDYNVIPDPMDAKNPENWGNDALFQPESRQKF 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + L ++GFT+A+RA  D    ++FWDY A +W KN GIRIDHI+LSP+A+ L+    ID 
Sbjct: 181 RTLTHLGFTEAVRACTDAPETFTFWDYQAGAWQKNNGIRIDHILLSPQASDLMAGCGIDK 240

Query: 244 KPRGWTKPSDHTPVIVSL 261
             RGW KPSDH PV V+L
Sbjct: 241 HVRGWEKPSDHVPVWVNL 258


>gi|254693606|ref|ZP_05155434.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 3 str. Tulya]
 gi|261213872|ref|ZP_05928153.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 3 str. Tulya]
 gi|260915479|gb|EEX82340.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 3 str. Tulya]
          Length = 260

 Score =  228 bits (581), Expect = 6e-58,   Method: Composition-based stats.
 Identities = 142/260 (54%), Positives = 191/260 (73%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+N ++ARI NL  W++E++PDI+CLQE K+ D+ FP   +++L YH+ET GQK
Sbjct: 1   MKIATWNINGVKARIDNLQHWLRESSPDIVCLQEIKSVDEQFPRLEIEALGYHVETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVA+LSK  P EI   LPGDD D QARFIE  ++ +T  +R+ +LYLP+GNPI + K
Sbjct: 61  CFNGVALLSKKSPDEINKGLPGDDSDEQARFIEGIYSTDTGVVRVVSLYLPNGNPIDTEK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+SW++R   +A +RL LEEPL+ AGDYN+IP+P D  NP  W  DA F  + RQ+F
Sbjct: 121 FPYKLSWMQRLENWAKKRLTLEEPLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAF 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           ++L+N+GFTDAIRA+ D   +YSFWDY A +W KN GIRIDH+MLSPEAT+   SA I+ 
Sbjct: 181 RRLENLGFTDAIRASTDESGVYSFWDYQAGAWQKNNGIRIDHLMLSPEATNRFISANIEK 240

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
             R W KPSDH PV V+L +
Sbjct: 241 HVRAWEKPSDHVPVTVTLAV 260


>gi|209885397|ref|YP_002289254.1| exodeoxyribonuclease III [Oligotropha carboxidovorans OM5]
 gi|209873593|gb|ACI93389.1| exodeoxyribonuclease III [Oligotropha carboxidovorans OM5]
          Length = 260

 Score =  228 bits (581), Expect = 7e-58,   Method: Composition-based stats.
 Identities = 128/259 (49%), Positives = 171/259 (66%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+R R+ +L  W+KE  PD++CLQE K  D+ FP E L++L Y++ T GQK
Sbjct: 1   MRIATWNVNSVRQRLDHLVTWLKEREPDLVCLQEIKCLDEAFPREPLEALGYNVVTHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           ++NGVA+LSKY+  E    L GD  D+ ARF+E   +    T R+  LYLP+GNP+ + K
Sbjct: 61  TFNGVALLSKYRFEETRPQLAGDPDDLHARFLEGVVSHKDGTFRLACLYLPNGNPVNTEK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+SW+ R + +A +R++ EEP + AGD+N+IP P D YNP  W  DA F  + R  F
Sbjct: 121 YPYKLSWMDRLITYARERIKSEEPFVLAGDFNVIPTPADVYNPQAWLGDALFLPQTRDKF 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q L N+G TDA+RAT D    Y+FWDY A +W KN GIRIDH+++SP A   L +  ID 
Sbjct: 181 QTLLNLGLTDALRATTDAPQQYTFWDYQAGAWQKNNGIRIDHLLMSPPAADRLQAVGIDK 240

Query: 244 KPRGWTKPSDHTPVIVSLD 262
             RGW K SDH PV   LD
Sbjct: 241 HVRGWEKASDHVPVWADLD 259


>gi|327191803|gb|EGE58803.1| exodeoxyribonuclease III protein [Rhizobium etli CNPAF512]
          Length = 263

 Score =  228 bits (580), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 142/260 (54%), Positives = 192/260 (73%), Gaps = 1/260 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+N ++ARI NL  W+K+++PDI+CLQE KT D+ FP   +++L YH+ET GQK
Sbjct: 1   MKIATWNINGVKARIDNLTQWLKDSDPDIVCLQEIKTIDEGFPRLEIEALGYHVETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL-RIGNLYLPHGNPITST 122
            +NGVAILSK  P E+   LPGD LD QARF+EA FT+    + R+  +YLP+GNP+ + 
Sbjct: 61  GFNGVAILSKSSPSEVNRGLPGDALDEQARFLEAVFTLPDTRILRVCCIYLPNGNPVETE 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           KY  K++W++R   FA++RL+ EE L+ AGDYN+IP+PHDC++P +WENDA F  + R++
Sbjct: 121 KYPYKLAWMERLRSFAAERLDYEEMLVLAGDYNVIPEPHDCFDPKVWENDALFLPQTREA 180

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F+KL+N+G TDA+RAT D   LYSFWDY A +W KN GIRIDH++LSPEA   + SA I+
Sbjct: 181 FRKLENLGLTDAVRATTDATQLYSFWDYQAGAWPKNNGIRIDHLLLSPEAADRMTSAAIE 240

Query: 243 TKPRGWTKPSDHTPVIVSLD 262
              R W KPSDH PVI   D
Sbjct: 241 KHVRAWEKPSDHVPVIAYFD 260


>gi|294677951|ref|YP_003578566.1| exodeoxyribonuclease III [Rhodobacter capsulatus SB 1003]
 gi|294476771|gb|ADE86159.1| exodeoxyribonuclease III-1 [Rhodobacter capsulatus SB 1003]
          Length = 259

 Score =  228 bits (580), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 127/259 (49%), Positives = 164/259 (63%), Gaps = 1/259 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+N+N I+AR   L AW++   PD++ LQE K+ D+ FP E L    Y + T GQK
Sbjct: 1   MKIATFNINGIKARAEALPAWLRAAEPDVVLLQEIKSTDEAFPQEVLDGTGYTVHTHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           S+NGVAILS+    ++   LPGDD D QAR+IEAT  I T+ +R+  LYLP+GNP    K
Sbjct: 61  SFNGVAILSRLPLEDVTRGLPGDDSDDQARWIEAT-VIGTRAVRVCGLYLPNGNPAPGPK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           YD K++W+ R        L  EEPL+FAGDYN+IPQ  D   P  W  DA    E R +F
Sbjct: 120 YDYKLAWMARMQARVETLLRSEEPLVFAGDYNVIPQDEDAAKPESWRADALALPETRAAF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           +++ N+G TDA RA       YSFWDY A +W KN GIRIDH++LSP+A  LL  A ID 
Sbjct: 180 RRIVNLGLTDAFRARVPGPGQYSFWDYQAGAWQKNNGIRIDHLLLSPQAADLLRDAGIDK 239

Query: 244 KPRGWTKPSDHTPVIVSLD 262
           + R   KPSDH PV + LD
Sbjct: 240 EVRAGEKPSDHVPVWIDLD 258


>gi|190891504|ref|YP_001978046.1| exodeoxyribonuclease III protein [Rhizobium etli CIAT 652]
 gi|190696783|gb|ACE90868.1| exodeoxyribonuclease III protein [Rhizobium etli CIAT 652]
          Length = 263

 Score =  228 bits (580), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 141/260 (54%), Positives = 191/260 (73%), Gaps = 1/260 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+N ++ARI NL  W+K+++PDI+CLQE KT D+ FP   +++L YH+ET GQK
Sbjct: 1   MKIATWNINGVKARIDNLTQWLKDSDPDIVCLQEIKTIDEGFPRLEIEALGYHVETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL-RIGNLYLPHGNPITST 122
            +NGVAILSK  P E+   LPGD LD QARF+EA FT+    + R+  +YLP+GNP+ + 
Sbjct: 61  GFNGVAILSKSSPSEVNRGLPGDALDEQARFLEAVFTLPDTRILRVCCIYLPNGNPVETE 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           KY  K++W++R   FA++RL  EE L+ AGDYN+IP+PHDC++P +WENDA F  + R++
Sbjct: 121 KYPYKLAWMERLRSFAAERLAYEEMLVLAGDYNVIPEPHDCFDPKVWENDALFLPQTREA 180

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F++L+N+G TDA+RAT D   LYSFWDY A +W KN GIRIDH++LSPEA   + SA I+
Sbjct: 181 FRRLENLGLTDAVRATTDATRLYSFWDYQAGAWPKNNGIRIDHLLLSPEAADRMTSAAIE 240

Query: 243 TKPRGWTKPSDHTPVIVSLD 262
              R W KPSDH PVI   D
Sbjct: 241 KHVRAWEKPSDHVPVIAYFD 260


>gi|163759458|ref|ZP_02166543.1| exodeoxyribonuclease III [Hoeflea phototrophica DFL-43]
 gi|162283055|gb|EDQ33341.1| exodeoxyribonuclease III [Hoeflea phototrophica DFL-43]
          Length = 260

 Score =  227 bits (579), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 143/258 (55%), Positives = 189/258 (73%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+N ++ARI NL AW++E++PDI CLQE K+ D+ FP   L++L YH+ET GQK
Sbjct: 1   MKIATWNINGVKARIENLQAWLRESDPDIACLQEIKSVDEGFPRLELEALGYHVETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVAILSK  P E+   LPGDD D QARFIEA F+ ++  LR+ +LYLP+GNP+ + K
Sbjct: 61  GFNGVAILSKQSPEEVNRGLPGDDTDEQARFIEAVFSKDSGVLRVVSLYLPNGNPVDTEK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W++R   FA  RL LEEPL+ AGDYN+IP+P DC+NP  WE DA F  E R +F
Sbjct: 121 FPYKLRWMERLQAFAEDRLALEEPLVLAGDYNVIPEPVDCHNPKAWEGDALFRPESRTAF 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           ++L+N+GFTDA+R+ +D    Y+FWDY A +W KN GIRIDH+MLSPEA   L  A ++ 
Sbjct: 181 RRLENLGFTDALRSANDQAETYTFWDYQAGAWPKNNGIRIDHLMLSPEAADNLEWANVEK 240

Query: 244 KPRGWTKPSDHTPVIVSL 261
             RGW KPSDH PV +SL
Sbjct: 241 HVRGWEKPSDHVPVAISL 258


>gi|116251798|ref|YP_767636.1| exodeoxyribonuclease III [Rhizobium leguminosarum bv. viciae 3841]
 gi|115256446|emb|CAK07530.1| putative exodeoxyribonuclease III [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 263

 Score =  227 bits (579), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 142/260 (54%), Positives = 191/260 (73%), Gaps = 1/260 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+N ++ARI NL  W+K++NPDI+CLQE KT D+ FP   +++L YH+ET GQK
Sbjct: 1   MKIATWNINGVKARIDNLTQWLKDSNPDIVCLQEIKTVDEGFPRLEIEALGYHVETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL-RIGNLYLPHGNPITST 122
            +NGVAILSK  P E+   LPGD LD QARF+EA FT++   + R+  +YLP+GNP+ + 
Sbjct: 61  GFNGVAILSKSSPFEVNRGLPGDPLDEQARFLEAAFTLSDMRILRVCCIYLPNGNPVETE 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           KY  K++W++R   FA++RL  EE LI AGDYN+IP+PHDC++P +WENDA F  + R++
Sbjct: 121 KYPYKLAWMERLQTFAAERLAYEEMLILAGDYNVIPEPHDCFDPRVWENDALFLPQTREA 180

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F++L+N+G TDA+RAT D    YSFWDY A +W KN GIRIDH++LSPEA   + SA I+
Sbjct: 181 FRRLENLGLTDAVRATTDATQFYSFWDYQAGAWPKNNGIRIDHLLLSPEAADRMTSAAIE 240

Query: 243 TKPRGWTKPSDHTPVIVSLD 262
              R W KPSDH PVI   D
Sbjct: 241 KHVRAWEKPSDHVPVIAYFD 260


>gi|90423996|ref|YP_532366.1| exodeoxyribonuclease III [Rhodopseudomonas palustris BisB18]
 gi|90106010|gb|ABD88047.1| Exodeoxyribonuclease III [Rhodopseudomonas palustris BisB18]
          Length = 267

 Score =  227 bits (579), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 132/264 (50%), Positives = 176/264 (66%), Gaps = 1/264 (0%)

Query: 1   MSV-VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           M V + +ATWNVNS+R R+ +L  W+K+  PDI+CLQE K  D+ FP E +++L Y++ T
Sbjct: 1   MKVPMRIATWNVNSVRQRLDHLLVWLKDCAPDIVCLQEIKCVDEAFPREAIEALGYNVVT 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            GQK++NGVA+LSKY   E    L GDD D+ ARFIE   ++ +  +R+  LYLP+GNP 
Sbjct: 61  HGQKTFNGVALLSKYPLEEATPRLAGDDDDLHARFIEGVVSLKSGVVRVACLYLPNGNPP 120

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
            + KY  K+ W+ R L +A +RL+ EEPLI AGD+N+IP P D YNP  W  DA F  + 
Sbjct: 121 ETEKYAYKLKWMSRLLDYAKERLKTEEPLILAGDFNVIPAPGDVYNPAAWVGDALFKPQT 180

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R+SFQ L  +G +DA+RA  D    Y+FWDY A +W KN GIRIDH++LSP+A   L   
Sbjct: 181 RESFQALLGLGLSDALRAVTDAPSQYTFWDYQAGAWQKNWGIRIDHLLLSPQAADRLTGV 240

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
            ID   R W KPSDH PV + LD+
Sbjct: 241 GIDKHVRSWEKPSDHVPVWIDLDL 264


>gi|114707219|ref|ZP_01440117.1| exodeoxyribonuclease III [Fulvimarina pelagi HTCC2506]
 gi|114537415|gb|EAU40541.1| exodeoxyribonuclease III [Fulvimarina pelagi HTCC2506]
          Length = 260

 Score =  227 bits (579), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 129/258 (50%), Positives = 180/258 (69%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A+WN+N I+ARI  L AW++E NPDI CLQE K++D+ FP + ++ L YH+ET GQK
Sbjct: 1   MLIASWNINGIKARIDGLTAWLQERNPDIACLQEIKSQDETFPKKVIEDLGYHVETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVA+LSK +P  +   LPGD+ D QAR+IE  +  ++  LR+ ++YLP+GNP+ + K
Sbjct: 61  GFNGVALLSKEKPESVRRGLPGDESDEQARYIEGLWQTDSGPLRVASIYLPNGNPLGTAK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           ++ K++W+ R  R A   L  EE LI AGDYN+IPQP D ++P  W NDA F  E R + 
Sbjct: 121 FEYKLAWMDRLERHAEALLAHEERLILAGDYNVIPQPKDVHDPAAWLNDALFQPESRGNL 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           ++L ++GF DA+R T D   LY+FWDY A +W KN GIRIDH++LSPEA  +L S  ID 
Sbjct: 181 RRLVHLGFADALRMTDDRAELYTFWDYQAGAWQKNNGIRIDHLLLSPEAQIVLRSVGIDK 240

Query: 244 KPRGWTKPSDHTPVIVSL 261
           + R W KPSDH P++  L
Sbjct: 241 QVRSWEKPSDHVPILAEL 258


>gi|62289818|ref|YP_221611.1| exodeoxyribonuclease III [Brucella abortus bv. 1 str. 9-941]
 gi|82699743|ref|YP_414317.1| AP endonuclease [Brucella melitensis biovar Abortus 2308]
 gi|254689123|ref|ZP_05152377.1| AP endonuclease [Brucella abortus bv. 6 str. 870]
 gi|254697256|ref|ZP_05159084.1| AP endonuclease [Brucella abortus bv. 2 str. 86/8/59]
 gi|254730155|ref|ZP_05188733.1| AP endonuclease [Brucella abortus bv. 4 str. 292]
 gi|256257372|ref|ZP_05462908.1| AP endonuclease [Brucella abortus bv. 9 str. C68]
 gi|260754622|ref|ZP_05866970.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 6 str. 870]
 gi|260757845|ref|ZP_05870193.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 4 str. 292]
 gi|260761668|ref|ZP_05874011.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 2 str. 86/8/59]
 gi|260883649|ref|ZP_05895263.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 9 str. C68]
 gi|62195950|gb|AAX74250.1| Xth-1, exodeoxyribonuclease III [Brucella abortus bv. 1 str. 9-941]
 gi|82615844|emb|CAJ10848.1| AP endonuclease, family 1:Exodeoxyribonuclease III
           xth:Endonuclease/exonuclease/phosphatase family
           [Brucella melitensis biovar Abortus 2308]
 gi|260668163|gb|EEX55103.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 4 str. 292]
 gi|260672100|gb|EEX58921.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 2 str. 86/8/59]
 gi|260674730|gb|EEX61551.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 6 str. 870]
 gi|260873177|gb|EEX80246.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 9 str. C68]
          Length = 260

 Score =  227 bits (579), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 143/260 (55%), Positives = 192/260 (73%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+NS++ARI NL  W++E++PDI+CLQE K+ D+ FP   +++L YH+ET GQK
Sbjct: 1   MKIATWNINSVKARIDNLQHWLRESSPDIVCLQEIKSVDEQFPRLEIEALGYHVETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVA+LSK  P EI   LPGDD D QARFIE  ++ +T  +R+ +LYLP+GNPI + K
Sbjct: 61  GFNGVALLSKKSPDEINKGLPGDDSDEQARFIEGIYSTDTGVVRVVSLYLPNGNPIDTEK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+SW++R   +A +RL LEEPL+ AGDYN+IP+P D  NP  W  DA F  + RQ+F
Sbjct: 121 FPYKLSWMQRLENWAKKRLTLEEPLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAF 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           ++L+N+GFTDAIRA+ D   +YSFWDY A +W KN GIRIDH+MLSPEAT+   SA I+ 
Sbjct: 181 RRLENLGFTDAIRASTDESGVYSFWDYQAGAWQKNNGIRIDHLMLSPEATNRFISANIEK 240

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
             R W KPSDH PV V+L +
Sbjct: 241 HVRAWEKPSDHVPVTVTLAV 260


>gi|86749875|ref|YP_486371.1| exodeoxyribonuclease III [Rhodopseudomonas palustris HaA2]
 gi|86572903|gb|ABD07460.1| Exodeoxyribonuclease III [Rhodopseudomonas palustris HaA2]
          Length = 276

 Score =  227 bits (579), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 129/264 (48%), Positives = 176/264 (66%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + +ATWNVNS+R R+ +L +W+ E  PD++CLQE K  D+ FP E +++L Y++ T G
Sbjct: 12  NDMRIATWNVNSVRQRLDHLVSWLNECAPDVVCLQEIKCVDEAFPREAIEALGYNVVTHG 71

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           QK++NGVA+LSKY   E    L GDD D  ARF+E   ++    +R+  LYLP+GNP+ S
Sbjct: 72  QKTFNGVALLSKYPLEEATPRLAGDDDDTHARFLEGVVSLKRGVVRVACLYLPNGNPVES 131

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            KY  K+ W+ R L +  QRL+ EEPLI AGD+N+IPQP D +NP  W +DA F  + R+
Sbjct: 132 EKYPYKLRWMSRLLEYTQQRLKTEEPLILAGDFNVIPQPIDVHNPAGWVDDALFRPQTRE 191

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           SFQ L  +G TDA+RA+ D    Y+FWDY A +W KN G+RIDH++LSP+AT  L +  I
Sbjct: 192 SFQALLGLGLTDALRASTDAPGQYTFWDYQAGAWQKNWGLRIDHLLLSPQATDRLRNVGI 251

Query: 242 DTKPRGWTKPSDHTPVIVSLDIPE 265
           D   R W KPSDH PV    D+  
Sbjct: 252 DAYVRNWEKPSDHVPVWADFDLDA 275


>gi|254500814|ref|ZP_05112965.1| exodeoxyribonuclease III [Labrenzia alexandrii DFL-11]
 gi|222436885|gb|EEE43564.1| exodeoxyribonuclease III [Labrenzia alexandrii DFL-11]
          Length = 260

 Score =  227 bits (578), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 125/258 (48%), Positives = 169/258 (65%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+N ++AR+  +  W+KE +PD+ C QE K+ D+NFP +  + L Y++ET GQK
Sbjct: 1   MKIATWNINGVKARLETVQEWLKEASPDVACFQEIKSVDENFPRQPFEDLGYNVETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVAILSK    ++   LPG+D D QAR+IEAT T     +R G LYLP+GNP+ + K
Sbjct: 61  GFNGVAILSKTPLEDVERRLPGNDDDEQARYIEATVTHGDGVVRFGCLYLPNGNPLGTEK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W+ R L  A +RL  E P I  GDYN+IP P D  NP  W +DA F  E RQ F
Sbjct: 121 FPYKLGWMDRLLVHAEKRLAEEVPFILLGDYNVIPDPVDAKNPENWTDDALFQPESRQKF 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + L ++G T+AIRA  +    ++FWDY A +W KN GIRIDHI++SP+A   +    ID 
Sbjct: 181 RALTHLGMTEAIRACTEAPETFTFWDYQAGAWQKNNGIRIDHILMSPQANDKMLGCGIDK 240

Query: 244 KPRGWTKPSDHTPVIVSL 261
             RGW KPSDH PV V+L
Sbjct: 241 HVRGWEKPSDHVPVWVTL 258


>gi|153009683|ref|YP_001370898.1| exodeoxyribonuclease III Xth [Ochrobactrum anthropi ATCC 49188]
 gi|151561571|gb|ABS15069.1| exodeoxyribonuclease III Xth [Ochrobactrum anthropi ATCC 49188]
          Length = 260

 Score =  227 bits (578), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 136/260 (52%), Positives = 186/260 (71%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+N ++ARI NL  W+KE++PDI CLQE K+ D  FP   +++L YH+ET GQK
Sbjct: 1   MKIATWNINGVKARIENLQHWLKESSPDIACLQEIKSVDDQFPRLEIEALGYHVETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVA+LSK  P E+   LPGDD D QARFIE  ++ +   +R+ +LYLP+GNP+ + K
Sbjct: 61  GFNGVALLSKKSPDEVNRGLPGDDGDEQARFIEGVYSTDKGVVRVVSLYLPNGNPVDTEK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+SW++R   +A  RL LEEPL+ AGDYN+IP+P D  NP  W  DA F  + RQ+F
Sbjct: 121 FPYKLSWMQRLELWAKDRLALEEPLVLAGDYNVIPEPDDAKNPEQWVGDALFKPQSRQAF 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           ++L+N+GFTDAIRA+ D   +YSFWDY A +W KN GIRIDH+MLSPEA +   S+ ++ 
Sbjct: 181 RRLENLGFTDAIRASTDDSGIYSFWDYQAGAWQKNNGIRIDHLMLSPEAANRFISSDVEK 240

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
             R W KPSDH PV ++L +
Sbjct: 241 HVRAWEKPSDHVPVTITLSV 260


>gi|115524629|ref|YP_781540.1| exodeoxyribonuclease III [Rhodopseudomonas palustris BisA53]
 gi|115518576|gb|ABJ06560.1| Exodeoxyribonuclease III [Rhodopseudomonas palustris BisA53]
          Length = 263

 Score =  227 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 124/260 (47%), Positives = 172/260 (66%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+R R+ +L  W+ + +PDI+CLQE K  D+ FP E +++L Y++ T GQK
Sbjct: 1   MRIATWNVNSVRQRLDHLLTWLNDCSPDIVCLQEIKCVDEAFPREPIEALGYNVVTHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           ++NGVA+LSK+   E    L GD+ DV ARF+E   ++    +R+  LYLP+GNP+ + K
Sbjct: 61  TFNGVALLSKHPLDEATPRLAGDEEDVHARFLEGVVSLKHGVVRVACLYLPNGNPVDTEK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W++R   +  +RL  EEPLI AGD+N+IP P D YN + W +DA F  + R+SF
Sbjct: 121 YPYKLKWMQRLFDYTKERLRTEEPLILAGDFNVIPAPADVYNALAWVDDALFKPQTRESF 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q L  +G TDA+RA+ D    Y+FWDY A +W KN GIRIDH++LSP+A   L    ID 
Sbjct: 181 QALLGLGLTDALRASTDAAGQYTFWDYQAGAWQKNWGIRIDHLLLSPQAADRLTGVGIDR 240

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
             R W KPSDH PV    D+
Sbjct: 241 HVRSWEKPSDHVPVWADFDL 260


>gi|163843144|ref|YP_001627548.1| exodeoxyribonuclease III (xth) [Brucella suis ATCC 23445]
 gi|163673867|gb|ABY37978.1| exodeoxyribonuclease III (xth) [Brucella suis ATCC 23445]
          Length = 260

 Score =  227 bits (578), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 142/260 (54%), Positives = 191/260 (73%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+N ++ARI NL  W++E++PDI+CLQE K+ D+ FP   +++L YH+ET GQK
Sbjct: 1   MKIATWNINGVKARIDNLQHWLRESSPDIVCLQEIKSVDEQFPRLEIEALGYHVETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVA+LSK  P EI   LPGDD D QARFIE  ++ +T  +R+ +LYLP+GNPI + K
Sbjct: 61  GFNGVALLSKKSPDEINKDLPGDDSDEQARFIEGIYSTDTGVVRVVSLYLPNGNPIDTEK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+SW++R   +A +RL LEEPL+ AGDYN+IP+P D  NP  W  DA F  + RQ+F
Sbjct: 121 FPYKLSWMQRLENWAKKRLTLEEPLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAF 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           ++L+N+GFTDAIRA+ D   +YSFWDY A +W KN GIRIDH+MLSPEAT+   SA I+ 
Sbjct: 181 RRLENLGFTDAIRASTDESGVYSFWDYQAGAWQKNNGIRIDHLMLSPEATNRFISANIEK 240

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
             R W KPSDH PV V+L +
Sbjct: 241 HVRAWEKPSDHVPVTVTLAV 260


>gi|15965272|ref|NP_385625.1| putative exodeoxyribonuclease III protein [Sinorhizobium meliloti
           1021]
 gi|307309295|ref|ZP_07588963.1| exodeoxyribonuclease III Xth [Sinorhizobium meliloti BL225C]
 gi|307317036|ref|ZP_07596477.1| exodeoxyribonuclease III Xth [Sinorhizobium meliloti AK83]
 gi|15074452|emb|CAC46098.1| Putative exodeoxyribonuclease III [Sinorhizobium meliloti 1021]
 gi|306897124|gb|EFN27869.1| exodeoxyribonuclease III Xth [Sinorhizobium meliloti AK83]
 gi|306900296|gb|EFN30913.1| exodeoxyribonuclease III Xth [Sinorhizobium meliloti BL225C]
          Length = 263

 Score =  226 bits (577), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 140/258 (54%), Positives = 183/258 (70%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+N ++AR+  L  W++E+NPDI CLQE K+ D+ FP   +++L YH+ET GQK
Sbjct: 1   MKIATWNINGVKARLDGLVGWLRESNPDIACLQEIKSVDETFPRGEIEALGYHVETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVA+LSK +P EI   LPGD  D Q+RFIE  F++N   LR+  LYLP+GNP+ + K
Sbjct: 61  GFNGVALLSKVRPDEINRGLPGDPADEQSRFIEGVFSVNGGALRVCCLYLPNGNPVETEK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K++W++R   FA QRL LEEPLI AGDYN+IP+ HDC++  +W NDA +  E R +F
Sbjct: 121 YPYKLAWMRRLAAFAEQRLVLEEPLILAGDYNVIPEAHDCWDVKVWRNDALYLPETRAAF 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           ++L+N+GFTDA+RAT D   LYSFWDY A  W KN GIRIDH+MLSPEA   L S  I+ 
Sbjct: 181 RRLRNLGFTDAVRATSDEAPLYSFWDYQAGCWQKNFGIRIDHLMLSPEAADKLVSTSIEK 240

Query: 244 KPRGWTKPSDHTPVIVSL 261
             R W KPSDH PV    
Sbjct: 241 HVRAWEKPSDHVPVTAEF 258


>gi|197105436|ref|YP_002130813.1| exodeoxyribonuclease III [Phenylobacterium zucineum HLK1]
 gi|196478856|gb|ACG78384.1| exodeoxyribonuclease III [Phenylobacterium zucineum HLK1]
          Length = 259

 Score =  226 bits (577), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 119/259 (45%), Positives = 164/259 (63%), Gaps = 1/259 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSI AR+  +  W +   PD+ CLQE K  D+ FP E  + L Y++   GQK
Sbjct: 1   MRIATWNVNSINARLETVVRWFEAAQPDVACLQEIKCVDEKFPAEPFERLGYNLAIHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVA+LSK    ++   LP  D D  AR+IEA  +   Q +R+ ++YLP+GNP+ + K
Sbjct: 61  TYNGVALLSKRPLEDVTRGLPEGDGDEHARYIEAVVSGP-QPVRVASIYLPNGNPVGTEK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K++W+ R  R A   L+LEEPL+ AGDYN+IP+P D   P  WE+DA F  + R +F
Sbjct: 120 FAYKLAWMGRLHRHAQNLLKLEEPLVLAGDYNVIPEPRDAEFPKNWEDDALFQPQSRAAF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + L+N+G T+A          Y+FWDY A +W +N GIRIDH +LSP+A  LL    I  
Sbjct: 180 RALKNLGLTEAYLQADGAPGAYTFWDYQAGAWQRNNGIRIDHALLSPQAADLLRGVTIHR 239

Query: 244 KPRGWTKPSDHTPVIVSLD 262
             RGW KPSDH P++V LD
Sbjct: 240 DVRGWEKPSDHVPLVVELD 258


>gi|83952174|ref|ZP_00960906.1| exodeoxyribonuclease III [Roseovarius nubinhibens ISM]
 gi|83837180|gb|EAP76477.1| exodeoxyribonuclease III [Roseovarius nubinhibens ISM]
          Length = 260

 Score =  226 bits (577), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 122/260 (46%), Positives = 165/260 (63%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A++N+N I+ARI  L AW+ E  PD+  LQE K+ D+NFP E  +   Y +ET GQK
Sbjct: 1   MKIASFNINGIKARIDALPAWLDEAQPDVAILQEIKSVDENFPREIFEERGYQVETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           S+NGVAILSK    ++   LPGDD D QAR+IEAT   +   LR+  LYLP+GNP    K
Sbjct: 61  SFNGVAILSKLPLEDVTRGLPGDDADEQARYIEATVIGDHSALRLCGLYLPNGNPAPGPK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           YD K++W++R    A   L LEEP + AGDYNIIPQ  D   P  W  DA    + R ++
Sbjct: 121 YDYKLAWMERLQARAEALLALEEPFLMAGDYNIIPQDEDAKRPEAWREDALALPQSRAAY 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           +++ N+G T+A RA       Y+FWDY A +W+++ GIRIDH +LSP+    L   +ID 
Sbjct: 181 RRIVNLGLTEAFRARTQGPGHYTFWDYQAGAWNRDDGIRIDHFLLSPQCADRLTDCQIDK 240

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
             RG  KPSDH P+ ++LDI
Sbjct: 241 HVRGGDKPSDHVPIWITLDI 260


>gi|209549080|ref|YP_002280997.1| exodeoxyribonuclease III Xth [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209534836|gb|ACI54771.1| exodeoxyribonuclease III Xth [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 263

 Score =  226 bits (577), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 138/260 (53%), Positives = 190/260 (73%), Gaps = 1/260 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+N ++ARI NL  W+K+++PDI+CLQE KT D+ FP   +++L YH+ET GQK
Sbjct: 1   MKIATWNINGVKARIDNLTQWLKDSDPDIVCLQEIKTIDEGFPRLEIEALGYHVETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL-RIGNLYLPHGNPITST 122
            +NGVAILSK  P E+   LPGD LD Q+RF+EA FT+    + R+  +YLP+GNP+ + 
Sbjct: 61  GFNGVAILSKTSPSEVNRGLPGDPLDEQSRFLEAVFTLPDTRILRVCCIYLPNGNPVDTE 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           KY  K++W++R   FA++RL  EE L+ AGDYN+IP+PHDC++P +WE+DA F  + R++
Sbjct: 121 KYPYKLAWMERLRSFAAERLAYEEMLVLAGDYNVIPEPHDCFDPKVWESDALFLPQTREA 180

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F++L+N+G TDA+RAT D    YSFWDY A +W KN GIRIDH++LSPEA   + SA I+
Sbjct: 181 FRRLENLGLTDAVRATTDATQFYSFWDYQAGAWPKNNGIRIDHLLLSPEAADRMTSAAIE 240

Query: 243 TKPRGWTKPSDHTPVIVSLD 262
              R W KPSDH PVI   D
Sbjct: 241 KHVRAWEKPSDHVPVIAYFD 260


>gi|86357443|ref|YP_469335.1| exodeoxyribonuclease III protein [Rhizobium etli CFN 42]
 gi|86281545|gb|ABC90608.1| exodeoxyribonuclease III protein [Rhizobium etli CFN 42]
          Length = 263

 Score =  226 bits (577), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 140/260 (53%), Positives = 190/260 (73%), Gaps = 1/260 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+N ++ARI NL  W+K+++PDI+CLQE KT D+ FP   +++L YH+ET GQK
Sbjct: 1   MKIATWNINGVKARIDNLTQWLKDSDPDIVCLQEIKTIDEGFPRLEIEALGYHVETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL-RIGNLYLPHGNPITST 122
            +NGVAILSK  P E+   LPGD LD QARF+EA FT+    + R+  +YLP+GNP+ + 
Sbjct: 61  GFNGVAILSKTSPFEVNRGLPGDPLDEQARFLEAVFTLPDTRILRVCCIYLPNGNPVDTE 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           KY  K++W++R   FA++RL  EE L+ AGDYN+IP+PHDC++P  WE+DA F  + R++
Sbjct: 121 KYPYKLAWMERLRSFAAERLAYEEMLVLAGDYNVIPEPHDCFDPRAWESDALFLPQTRRA 180

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F++L+N+G TDA+RAT D   LYSFWDY A +W KN GIRIDH++LSPEA   + SA I+
Sbjct: 181 FRRLENLGLTDAVRATTDATRLYSFWDYQAGAWPKNNGIRIDHLLLSPEAADRMTSAAIE 240

Query: 243 TKPRGWTKPSDHTPVIVSLD 262
              R W KPSDH PVI   D
Sbjct: 241 KHVRAWEKPSDHVPVIAYFD 260


>gi|17987376|ref|NP_540010.1| exodeoxyribonuclease III [Brucella melitensis bv. 1 str. 16M]
 gi|17983063|gb|AAL52274.1| exodeoxyribonuclease iii [Brucella melitensis bv. 1 str. 16M]
          Length = 296

 Score =  226 bits (576), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 142/260 (54%), Positives = 191/260 (73%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+N ++ARI NL  W++E++PDI+CLQE K+ D+ FP   +++L YH+ET GQK
Sbjct: 37  MKIATWNINGVKARIDNLQHWLRESSPDIVCLQEIKSVDEQFPRLEIEALGYHVETHGQK 96

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVA+LSK  P EI   LPGDD D QARFIE  ++ +T  +R+ +LYLP+GNPI + K
Sbjct: 97  GFNGVALLSKKSPDEINKGLPGDDSDEQARFIEGIYSTDTGVVRVVSLYLPNGNPIDTEK 156

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+SW++R   +A +RL LEEPL+ AGDYN+IP+P D  NP  W  DA F  + RQ+F
Sbjct: 157 FPYKLSWMQRLENWAKKRLTLEEPLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAF 216

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           ++L+N+GFTDAIRA+ D   +YSFWDY A +W KN GIRIDH+MLSPEAT+   SA I+ 
Sbjct: 217 RRLENLGFTDAIRASTDESGVYSFWDYQAGAWQKNNGIRIDHLMLSPEATNRFISANIEK 276

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
             R W KPSDH PV V+L +
Sbjct: 277 HVRAWEKPSDHVPVTVTLAV 296


>gi|260459779|ref|ZP_05808033.1| exodeoxyribonuclease III Xth [Mesorhizobium opportunistum WSM2075]
 gi|259034581|gb|EEW35838.1| exodeoxyribonuclease III Xth [Mesorhizobium opportunistum WSM2075]
          Length = 264

 Score =  226 bits (576), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 134/261 (51%), Positives = 178/261 (68%), Gaps = 1/261 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + TWN+N +RARI NL  W+ E+ PDI+CLQE KT D  FP   +++L Y++ET GQK
Sbjct: 1   MKIVTWNINGVRARIGNLTHWLTESAPDIVCLQEIKTVDDQFPRAEIEALGYNVETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122
            +NGVA+LSK +  E+   LPGDD D QARFIE  F+ +   LR+ +LYLP+GNPI    
Sbjct: 61  GFNGVALLSKLRFDEVTKGLPGDDADEQARFIEGVFSTDKGALRVASLYLPNGNPIDDEK 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           K+  K+SW+ R  R+A +RL LEE L+ AGDYN+IP+P D   P  W  DA F  + RQ+
Sbjct: 121 KFPYKLSWMARLERWAEERLRLEEALVLAGDYNVIPEPIDARFPENWLGDALFQPQTRQA 180

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F++L N+GFT+A+RA  D    Y+FWDY A +W KN GIRIDH++LSPEA +   SA I+
Sbjct: 181 FRRLLNLGFTEAVRAVTDAPDTYTFWDYQAGAWQKNNGIRIDHLLLSPEAANRFSSASIE 240

Query: 243 TKPRGWTKPSDHTPVIVSLDI 263
              R W KPSDH PV + L +
Sbjct: 241 KHVRAWEKPSDHVPVAIDLAL 261


>gi|148559237|ref|YP_001258847.1| exodeoxyribonuclease III [Brucella ovis ATCC 25840]
 gi|148370494|gb|ABQ60473.1| exodeoxyribonuclease III [Brucella ovis ATCC 25840]
          Length = 279

 Score =  226 bits (576), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 142/260 (54%), Positives = 191/260 (73%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+N ++ARI NL  W++E++PDI+CLQE K+ D+ FP   +++L YH+ET GQK
Sbjct: 20  MKIATWNINGVKARIDNLQHWLRESSPDIVCLQEIKSVDEQFPRLEIEALGYHVETHGQK 79

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVA+LSK  P EI   LPGDD D QARFIE  ++ +T  +R+ +LYLP+GNPI + K
Sbjct: 80  GFNGVALLSKKSPDEINKGLPGDDSDEQARFIEGIYSTDTGVVRVVSLYLPNGNPIDTEK 139

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+SW++R   +A +RL LEEPL+ AGDYN+IP+P D  NP  W  DA F  + RQ+F
Sbjct: 140 FPYKLSWMQRLENWAKKRLTLEEPLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAF 199

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           ++L+N+GFTDAIRA+ D   +YSFWDY A +W KN GIRIDH+MLSPEAT+   SA I+ 
Sbjct: 200 RRLENLGFTDAIRASTDESGVYSFWDYQAGAWQKNNGIRIDHLMLSPEATNRFTSANIEK 259

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
             R W KPSDH PV V+L +
Sbjct: 260 HVRAWEKPSDHVPVTVTLAV 279


>gi|218673944|ref|ZP_03523613.1| exodeoxyribonuclease III Xth [Rhizobium etli GR56]
          Length = 263

 Score =  226 bits (575), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 138/260 (53%), Positives = 191/260 (73%), Gaps = 1/260 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+N ++ARI NL  W+K+++PDI+CLQE KT D+ FP   +++L YH+ET GQK
Sbjct: 1   MKIATWNINGVKARIDNLTQWLKDSDPDIVCLQEIKTIDEGFPRLEIEALGYHVETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL-RIGNLYLPHGNPITST 122
            +NGVAILSK  P E+   LPGD LD Q+RF+EA FT+    + R+  +YLP+GNP+ + 
Sbjct: 61  GFNGVAILSKTSPSEVNRGLPGDALDEQSRFLEAVFTLPDTRILRVCCIYLPNGNPVDTE 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           KY  K++W++R   FA++RL  EE L+ AGDYN+IP+PHDC++P +WE+DA F  + R++
Sbjct: 121 KYPYKLAWMERLRMFAAERLAYEEILVLAGDYNVIPEPHDCFDPKVWESDALFLPQTREA 180

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F++L+N+G TDA+RAT D   LYSFWDY A +W KN GIRIDH++LSPEA   + SA I+
Sbjct: 181 FRRLENLGLTDAVRATTDATRLYSFWDYQAGAWPKNNGIRIDHLLLSPEAADRMTSAAIE 240

Query: 243 TKPRGWTKPSDHTPVIVSLD 262
              R W KPSDH PV+   D
Sbjct: 241 KHVRAWEKPSDHVPVVAYFD 260


>gi|13471192|ref|NP_102761.1| exodeoxyribonuclease III [Mesorhizobium loti MAFF303099]
 gi|14021936|dbj|BAB48547.1| exodeoxyribonuclease III [Mesorhizobium loti MAFF303099]
          Length = 264

 Score =  226 bits (575), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 133/261 (50%), Positives = 181/261 (69%), Gaps = 1/261 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + TWN+N +RARI NL  W+ E+ PDI+CLQE KT D+ FP   +++L Y++ET GQK
Sbjct: 1   MKIVTWNINGVRARIGNLTHWLTESAPDIVCLQEIKTVDEQFPRAEIEALGYNVETNGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122
            +NGVA+LSK +  E++  LPGDD D QARFIE  F+ +   LR+ +LYLP+GNPI    
Sbjct: 61  GFNGVALLSKLRFDEVIRGLPGDDTDEQARFIEGVFSTDKGALRVASLYLPNGNPIDDEK 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           K+  K++W+ R  R+A +RL+LEE L+ AGDYN+IP+P D   P  W  DA F  + RQ+
Sbjct: 121 KFPYKLNWMARLERWAEERLKLEEALVLAGDYNVIPEPIDARFPENWLGDALFQPQTRQA 180

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F++L N+GFT+A+RA  D    Y+FWDY A +W KN GIRIDH++LSPEA +   SA I+
Sbjct: 181 FRRLLNLGFTEAVRAVTDAPDTYTFWDYQAGAWQKNNGIRIDHLLLSPEAANRFSSASIE 240

Query: 243 TKPRGWTKPSDHTPVIVSLDI 263
              R W KPSDH PV + L +
Sbjct: 241 KHVRAWEKPSDHVPVAIDLAL 261


>gi|237815303|ref|ZP_04594301.1| exodeoxyribonuclease III (xth) [Brucella abortus str. 2308 A]
 gi|237790140|gb|EEP64350.1| exodeoxyribonuclease III (xth) [Brucella abortus str. 2308 A]
          Length = 284

 Score =  226 bits (575), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 143/260 (55%), Positives = 192/260 (73%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+NS++ARI NL  W++E++PDI+CLQE K+ D+ FP   +++L YH+ET GQK
Sbjct: 25  MKIATWNINSVKARIDNLQHWLRESSPDIVCLQEIKSVDEQFPRLEIEALGYHVETHGQK 84

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVA+LSK  P EI   LPGDD D QARFIE  ++ +T  +R+ +LYLP+GNPI + K
Sbjct: 85  GFNGVALLSKKSPDEINKGLPGDDSDEQARFIEGIYSTDTGVVRVVSLYLPNGNPIDTEK 144

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+SW++R   +A +RL LEEPL+ AGDYN+IP+P D  NP  W  DA F  + RQ+F
Sbjct: 145 FPYKLSWMQRLENWAKKRLTLEEPLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAF 204

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           ++L+N+GFTDAIRA+ D   +YSFWDY A +W KN GIRIDH+MLSPEAT+   SA I+ 
Sbjct: 205 RRLENLGFTDAIRASTDESGVYSFWDYQAGAWQKNNGIRIDHLMLSPEATNRFISANIEK 264

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
             R W KPSDH PV V+L +
Sbjct: 265 HVRAWEKPSDHVPVTVTLAV 284


>gi|144899913|emb|CAM76777.1| Endonuclease/exonuclease/phosphatase [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 256

 Score =  225 bits (574), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 113/260 (43%), Positives = 160/260 (61%), Gaps = 4/260 (1%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +V +ATWN+NS++AR+ N+  W++   PD++ LQE K +D  FP    QS  + +   GQ
Sbjct: 1   MVRIATWNINSVKARLPNVMDWLQSAKPDVLLLQEIKCQDDGFPTLDFQSAGWQVAVHGQ 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           KSYNGVAILS++    +   LPGD+ D QAR+I+A        LRI +LYLP+GNP    
Sbjct: 61  KSYNGVAILSRHTLDNVQIRLPGDEADEQARYIQADIQG----LRIASLYLPNGNPCPGE 116

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           K+D K+ W++R +  +   L+   P +  GDYNI P   D Y+P  W +DA    E R  
Sbjct: 117 KFDYKLRWMRRLVDHSKTLLDQGMPFVLGGDYNICPTDADVYDPAGWADDALCRPESRAL 176

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F++L ++G T+A RA H    LY+FWDY A +W +  G+RIDH +LSP A   L +  ID
Sbjct: 177 FRELCHLGLTEAFRALHPQPGLYTFWDYQAGAWPRGNGLRIDHFLLSPAAADRLIACDID 236

Query: 243 TKPRGWTKPSDHTPVIVSLD 262
            +PRG  K SDHTP+ + L+
Sbjct: 237 KEPRGREKASDHTPIWIDLN 256


>gi|189024059|ref|YP_001934827.1| Exodeoxyribonuclease III [Brucella abortus S19]
 gi|297248222|ref|ZP_06931940.1| exodeoxyribonuclease III [Brucella abortus bv. 5 str. B3196]
 gi|189019631|gb|ACD72353.1| Exodeoxyribonuclease III [Brucella abortus S19]
 gi|297175391|gb|EFH34738.1| exodeoxyribonuclease III [Brucella abortus bv. 5 str. B3196]
          Length = 296

 Score =  225 bits (574), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 143/260 (55%), Positives = 192/260 (73%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+NS++ARI NL  W++E++PDI+CLQE K+ D+ FP   +++L YH+ET GQK
Sbjct: 37  MKIATWNINSVKARIDNLQHWLRESSPDIVCLQEIKSVDEQFPRLEIEALGYHVETHGQK 96

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVA+LSK  P EI   LPGDD D QARFIE  ++ +T  +R+ +LYLP+GNPI + K
Sbjct: 97  GFNGVALLSKKSPDEINKGLPGDDSDEQARFIEGIYSTDTGVVRVVSLYLPNGNPIDTEK 156

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+SW++R   +A +RL LEEPL+ AGDYN+IP+P D  NP  W  DA F  + RQ+F
Sbjct: 157 FPYKLSWMQRLENWAKKRLTLEEPLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAF 216

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           ++L+N+GFTDAIRA+ D   +YSFWDY A +W KN GIRIDH+MLSPEAT+   SA I+ 
Sbjct: 217 RRLENLGFTDAIRASTDESGVYSFWDYQAGAWQKNNGIRIDHLMLSPEATNRFISANIEK 276

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
             R W KPSDH PV V+L +
Sbjct: 277 HVRAWEKPSDHVPVTVTLAV 296


>gi|254420197|ref|ZP_05033921.1| exodeoxyribonuclease III [Brevundimonas sp. BAL3]
 gi|196186374|gb|EDX81350.1| exodeoxyribonuclease III [Brevundimonas sp. BAL3]
          Length = 265

 Score =  225 bits (574), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 120/265 (45%), Positives = 166/265 (62%), Gaps = 1/265 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+ AR+  + AW+++  PD+ C QE K  D+ FP E  +SL Y++ET GQK
Sbjct: 1   MRIATWNVNSVNARLPTVLAWLEQAAPDVACFQEIKCVDEKFPREAFESLGYNVETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           SYNGVA+LSKY   +I   LPGD+ D QAR++EA      + LR+ ++YLP+GNPI + K
Sbjct: 61  SYNGVALLSKYPLSDIRRGLPGDETDEQARYLEAVIEAP-RPLRVASIYLPNGNPIGTEK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +D K++W +R  R A   L  EEPL   GDYN+IP+  D  NP  W +DA F  + RQ+F
Sbjct: 120 FDYKLAWFERLNRHARDLLAFEEPLALCGDYNVIPEAEDAKNPAAWTDDALFQPQSRQAF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + L+N+G  D+     +    YSFWDY A +W +N GIRID  +LSP+A   L       
Sbjct: 180 RALKNLGLADSHEVGGEPAGTYSFWDYQAGAWQRNHGIRIDFALLSPQAADRLRGVETHR 239

Query: 244 KPRGWTKPSDHTPVIVSLDIPEPRK 268
             R   KPSDH PV+V +D+    +
Sbjct: 240 DARDMDKPSDHVPVVVDIDLSAGTE 264


>gi|319783180|ref|YP_004142656.1| exodeoxyribonuclease III Xth [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317169068|gb|ADV12606.1| exodeoxyribonuclease III Xth [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 264

 Score =  225 bits (574), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 134/261 (51%), Positives = 180/261 (68%), Gaps = 1/261 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + TWN+N +RARI NL  W+ E+ PDI+CLQE KT D+ FP   +++L Y++ET GQK
Sbjct: 1   MKIVTWNINGVRARIGNLTHWLTESAPDIVCLQEIKTVDEQFPRAEIEALGYNVETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122
            +NGVA+LSK +  E++  LPGDD D QARFIE  F+ +   LR+ +LYLP+GNPI    
Sbjct: 61  GFNGVALLSKLRFDEVIRGLPGDDADEQARFIEGVFSTDKGALRVASLYLPNGNPIDDEK 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           K+  K+SW+ R  R+A +RL LEE L+ AGDYN+IP+P D   P  W  DA F  + RQ+
Sbjct: 121 KFPYKLSWMARLERWAEERLRLEEALVLAGDYNVIPEPIDARFPENWLGDALFQPQTRQA 180

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F++L N+GFT+A+RA  D    Y+FWDY A +W KN GIRIDH++LSPEA +   SA I+
Sbjct: 181 FRRLLNLGFTEAVRAVTDARDTYTFWDYQAGAWQKNNGIRIDHLLLSPEAANRFSSASIE 240

Query: 243 TKPRGWTKPSDHTPVIVSLDI 263
              R W KPSDH PV + L +
Sbjct: 241 KHVRAWEKPSDHVPVAIDLAL 261


>gi|239831752|ref|ZP_04680081.1| exodeoxyribonuclease III (xth) [Ochrobactrum intermedium LMG 3301]
 gi|239824019|gb|EEQ95587.1| exodeoxyribonuclease III (xth) [Ochrobactrum intermedium LMG 3301]
          Length = 272

 Score =  225 bits (573), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 138/260 (53%), Positives = 186/260 (71%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+N ++ARI NL  W+KE++PDI+CLQE K+ D  FP   +++L YH+ET GQK
Sbjct: 13  MKIATWNINGVKARIDNLLHWLKESSPDIVCLQEIKSVDDQFPRLEIEALGYHVETHGQK 72

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVA+LSK  P EI   LPGDD D QARFIE  ++ +   +R+ +LYLP+GNP+ + K
Sbjct: 73  GFNGVALLSKKSPDEINRGLPGDDSDEQARFIEGVYSTDKGVVRVVSLYLPNGNPVDTEK 132

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+SW++R   +A  RL LEEPL+ AGDYN+IP+P D  NP  W  DA F  + RQ+F
Sbjct: 133 FPYKLSWMQRLELWARDRLALEEPLVLAGDYNVIPEPEDARNPGQWVGDALFQPQSRQAF 192

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           ++L+NMGFTDAIRA+ D   +YSFWDY A +W KN GIRIDH+MLSPEA +   S+ ++ 
Sbjct: 193 RRLENMGFTDAIRASTDEAGIYSFWDYQAGAWQKNNGIRIDHLMLSPEAANRFISSDVEK 252

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
             R W KPSDH PV + L +
Sbjct: 253 HVRAWEKPSDHVPVTIRLAV 272


>gi|90419377|ref|ZP_01227287.1| exodeoxyribonuclease III [Aurantimonas manganoxydans SI85-9A1]
 gi|90336314|gb|EAS50055.1| exodeoxyribonuclease III [Aurantimonas manganoxydans SI85-9A1]
          Length = 260

 Score =  225 bits (573), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 131/258 (50%), Positives = 176/258 (68%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+N ++AR+  L AW++E +PDI CLQE K  D+ FP E +++L YH+ET GQK
Sbjct: 1   MLIATWNINGVKARLDALLAWLQERSPDIACLQEIKNVDETFPREAIEALGYHVETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVA+LSK +P+ I   LPGD  D  ARFIE  +  + + LR+ +LYLP+GNP+ + K
Sbjct: 61  GFNGVALLSKEKPVSIEPRLPGDSSDEHARFIEGVWDFHGRPLRVASLYLPNGNPLGTEK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K++W++R L  A   +  EE L+ AGDYNIIP+  D   P  W  DA F  E R ++
Sbjct: 121 FTYKLAWMQRLLAHARDSMAREELLVLAGDYNIIPERGDAARPDKWTGDALFQPESRAAY 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           ++L N+G +DAIRAT D    YSFWDY A +W KN GIRIDH++LSPEA   + SA ID 
Sbjct: 181 RRLINLGLSDAIRATTDADGTYSFWDYQAGAWQKNNGIRIDHLLLSPEAQDRMASAGIDR 240

Query: 244 KPRGWTKPSDHTPVIVSL 261
             RGW KPSDH PV+V L
Sbjct: 241 HVRGWEKPSDHVPVLVEL 258


>gi|260566570|ref|ZP_05837040.1| exodeoxyribonuclease III [Brucella suis bv. 4 str. 40]
 gi|261758076|ref|ZP_06001785.1| exodeoxyribonuclease III [Brucella sp. F5/99]
 gi|260156088|gb|EEW91168.1| exodeoxyribonuclease III [Brucella suis bv. 4 str. 40]
 gi|261738060|gb|EEY26056.1| exodeoxyribonuclease III [Brucella sp. F5/99]
          Length = 279

 Score =  225 bits (573), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 142/260 (54%), Positives = 191/260 (73%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+N ++ARI NL  W++E++PDI+CLQE K+ D+ FP   +++L YH+ET GQK
Sbjct: 20  MKIATWNINGVKARIDNLQHWLRESSPDIVCLQEIKSVDEQFPRLEIEALGYHVETHGQK 79

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVA+LSK  P EI   LPGDD D QARFIE  ++ +T  +R+ +LYLP+GNPI + K
Sbjct: 80  GFNGVALLSKKSPDEINKGLPGDDSDEQARFIEGIYSTDTGVVRVVSLYLPNGNPIDTEK 139

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+SW++R   +A +RL LEEPL+ AGDYN+IP+P D  NP  W  DA F  + RQ+F
Sbjct: 140 FPYKLSWMQRLENWAKKRLTLEEPLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAF 199

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           ++L+N+GFTDAIRA+ D   +YSFWDY A +W KN GIRIDH+MLSPEAT+   SA I+ 
Sbjct: 200 RRLENLGFTDAIRASTDESGVYSFWDYQAGAWQKNNGIRIDHLMLSPEATNRFISANIEK 259

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
             R W KPSDH PV V+L +
Sbjct: 260 HVRAWEKPSDHVPVTVTLAV 279


>gi|163739595|ref|ZP_02147004.1| exodeoxyribonuclease III [Phaeobacter gallaeciensis BS107]
 gi|161387054|gb|EDQ11414.1| exodeoxyribonuclease III [Phaeobacter gallaeciensis BS107]
          Length = 268

 Score =  225 bits (573), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 128/269 (47%), Positives = 170/269 (63%), Gaps = 10/269 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+N+N I+ARI+ L  W+ E  PD++ LQE K+ D+ FP E  +   Y++ET GQK
Sbjct: 1   MKIATFNINGIKARINALPEWLDEAQPDVVVLQEIKSVDEAFPRELFEDRGYNVETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122
           S+NGVAILSK    ++   LPGDD D QAR+IEAT  +  Q +RI  LYLP+GNP+    
Sbjct: 61  SFNGVAILSKLPLEDVRRGLPGDDSDEQARWIEAT-VVGKQAIRICGLYLPNGNPVELDA 119

Query: 123 --------KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
                   KY  K++W++R  + A   L  E P + AGDYNIIPQ  D   P  W++DA 
Sbjct: 120 EGQPVEGGKYAYKLAWMERLRQRAKDLLAEEMPALMAGDYNIIPQAEDAKTPEAWKDDAL 179

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
              E R +FQ++  +GFT+A RA H     YSFWDY A +W++N GIRIDH +LSP+A  
Sbjct: 180 HRPESRAAFQRIMALGFTEAFRARHQGPGHYSFWDYQAGAWNRNNGIRIDHFLLSPQAAD 239

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           LL   +ID   RG  KPSDH PV V LD+
Sbjct: 240 LLRDCQIDKDVRGRDKPSDHVPVWVDLDL 268


>gi|260563899|ref|ZP_05834385.1| exodeoxyribonuclease III [Brucella melitensis bv. 1 str. 16M]
 gi|260153915|gb|EEW89007.1| exodeoxyribonuclease III [Brucella melitensis bv. 1 str. 16M]
          Length = 279

 Score =  225 bits (573), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 142/260 (54%), Positives = 191/260 (73%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+N ++ARI NL  W++E++PDI+CLQE K+ D+ FP   +++L YH+ET GQK
Sbjct: 20  MKIATWNINGVKARIDNLQHWLRESSPDIVCLQEIKSVDEQFPRLEIEALGYHVETHGQK 79

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVA+LSK  P EI   LPGDD D QARFIE  ++ +T  +R+ +LYLP+GNPI + K
Sbjct: 80  GFNGVALLSKKSPDEINKGLPGDDSDEQARFIEGIYSTDTGVVRVVSLYLPNGNPIDTEK 139

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+SW++R   +A +RL LEEPL+ AGDYN+IP+P D  NP  W  DA F  + RQ+F
Sbjct: 140 FPYKLSWMQRLENWAKKRLTLEEPLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAF 199

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           ++L+N+GFTDAIRA+ D   +YSFWDY A +W KN GIRIDH+MLSPEAT+   SA I+ 
Sbjct: 200 RRLENLGFTDAIRASTDESGVYSFWDYQAGAWQKNNGIRIDHLMLSPEATNRFISANIEK 259

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
             R W KPSDH PV V+L +
Sbjct: 260 HVRAWEKPSDHVPVTVTLAV 279


>gi|254487256|ref|ZP_05100461.1| exodeoxyribonuclease III [Roseobacter sp. GAI101]
 gi|214044125|gb|EEB84763.1| exodeoxyribonuclease III [Roseobacter sp. GAI101]
          Length = 260

 Score =  225 bits (572), Expect = 7e-57,   Method: Composition-based stats.
 Identities = 122/259 (47%), Positives = 158/259 (61%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+N+N I+ARI  L  W+ E  PD+  LQE KT D  FP E  +   Y++ET GQK
Sbjct: 1   MKIATFNINGIKARIDALPQWLDEAQPDVAILQEIKTVDDAFPRELFEDRGYNVETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           S+NGVAILSK    ++   LPGDD D QAR+IEAT   +   +R+  LYLP+GNP    K
Sbjct: 61  SFNGVAILSKRPLEDVTRGLPGDDGDEQARYIEATVMGDKSAIRLCGLYLPNGNPAPGPK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +D K+ W+ R    A   L  E P +  GDYN+IPQ  D   P  W +DA F  E R ++
Sbjct: 121 FDYKLEWMARLEDRARALLAEETPFLMTGDYNVIPQAEDAATPDAWRDDALFRPETRAAW 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           +KL  +G T+A RA       YSFWDY A +W++N GIRIDH +LSP    +L   +ID 
Sbjct: 181 RKLVALGLTEAFRARTQGPGHYSFWDYQAGAWNRNNGIRIDHFLLSPVVADMLRDCQIDK 240

Query: 244 KPRGWTKPSDHTPVIVSLD 262
           + RG  KPSDH PV V LD
Sbjct: 241 EIRGRDKPSDHVPVWVDLD 259


>gi|149202739|ref|ZP_01879711.1| exodeoxyribonuclease III [Roseovarius sp. TM1035]
 gi|149144021|gb|EDM32055.1| exodeoxyribonuclease III [Roseovarius sp. TM1035]
          Length = 260

 Score =  224 bits (571), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 124/259 (47%), Positives = 163/259 (62%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+N+N I+ARI  L AW+ E +PD+  LQE K+ D  FP E  +   Y++ET GQK
Sbjct: 1   MKIATFNINGIKARIDALPAWLDEASPDVALLQEIKSVDDGFPRELFEERGYNVETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVAILSK    ++   LPGDD D QAR+IEAT   + + LR+  LYLP+GNP    K
Sbjct: 61  GFNGVAILSKRPLEDVTRGLPGDDTDEQARWIEATVVGDHRALRLCGLYLPNGNPAPGPK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           YD K++W+ R    A   L  EEP++  GDYNIIPQ  D   P  W  DA    E R +F
Sbjct: 121 YDYKLAWMDRLHARARDLLASEEPVLMGGDYNIIPQDEDAARPDAWREDALARPESRAAF 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           +++ N+GFT+A RA       Y+FWDY A +W+KN GIRIDH +LSP+A  L+    ID 
Sbjct: 181 RRILNLGFTEAFRAQVQGPGHYTFWDYQAGAWNKNDGIRIDHFLLSPQAADLMTDCGIDK 240

Query: 244 KPRGWTKPSDHTPVIVSLD 262
             RG  KPSDH P+ V L+
Sbjct: 241 DIRGRDKPSDHVPLWVELN 259


>gi|110680357|ref|YP_683364.1| exodeoxyribonuclease III, putative [Roseobacter denitrificans OCh
           114]
 gi|109456473|gb|ABG32678.1| exodeoxyribonuclease III, putative [Roseobacter denitrificans OCh
           114]
          Length = 260

 Score =  224 bits (571), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 126/258 (48%), Positives = 165/258 (63%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+N+N I+ARI  L AW+KE  PD+  LQE K+ D+ FP    + + Y++ET GQK
Sbjct: 1   MKIATFNINGIKARIDALPAWLKEAQPDVALLQEIKSVDEAFPRTVFEDMGYNLETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           S+NGVAILSK    ++   LPGD+ D QAR+IEAT   +T  +R+  LYLP+GNP    K
Sbjct: 61  SFNGVAILSKLPLEDVTRGLPGDETDEQARYIEATVMGDTAPVRVCGLYLPNGNPAPGPK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           YD K+ W+ R    A   L  E   + AGDYNIIPQ  D   P  W  DA F LE R +F
Sbjct: 121 YDYKLDWMARLYDRAKALLADETTFVMAGDYNIIPQAEDAAKPESWREDALFRLESRTAF 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           ++L N+G T+A RA       YSFWDY A +W++N GIRIDH++LSP+A  +L   +ID 
Sbjct: 181 RRLLNLGLTEAFRARTQGPGHYSFWDYQAGAWNRNNGIRIDHLLLSPQAADMLVDCQIDK 240

Query: 244 KPRGWTKPSDHTPVIVSL 261
           + RG  KPSDH PV V L
Sbjct: 241 EVRGRDKPSDHVPVWVDL 258


>gi|163741419|ref|ZP_02148810.1| exodeoxyribonuclease III [Phaeobacter gallaeciensis 2.10]
 gi|161385153|gb|EDQ09531.1| exodeoxyribonuclease III [Phaeobacter gallaeciensis 2.10]
          Length = 268

 Score =  224 bits (571), Expect = 9e-57,   Method: Composition-based stats.
 Identities = 128/269 (47%), Positives = 170/269 (63%), Gaps = 10/269 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+N+N I+ARI+ L  W+ E  PD++ LQE K+ D+ FP E  +   Y++ET GQK
Sbjct: 1   MKIATFNINGIKARINALPEWLDEAQPDVVVLQEIKSVDEAFPRELFEDRGYNVETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122
           S+NGVAILSK    ++   LPGDD D QAR+IEAT  +  Q +RI  LYLP+GNP+    
Sbjct: 61  SFNGVAILSKLPLEDVRRGLPGDDSDEQARWIEAT-VVGKQAIRICGLYLPNGNPVELDA 119

Query: 123 --------KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
                   KY  K++W++R  + A   L  E P + AGDYNIIPQ  D   P  W++DA 
Sbjct: 120 EGRPVEGGKYAYKLAWMERLRQRAKDLLAEEMPALMAGDYNIIPQAEDAKTPDAWKDDAL 179

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
              E R +FQ++  +GFT+A RA H     YSFWDY A +W++N GIRIDH +LSP+A  
Sbjct: 180 HRPESRAAFQRIVALGFTEAFRARHQGPGHYSFWDYQAGAWNRNNGIRIDHFLLSPQAAD 239

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           LL   +ID   RG  KPSDH PV V LD+
Sbjct: 240 LLRDCQIDKDVRGRDKPSDHVPVWVDLDL 268


>gi|154248160|ref|YP_001419118.1| exodeoxyribonuclease III Xth [Xanthobacter autotrophicus Py2]
 gi|154162245|gb|ABS69461.1| exodeoxyribonuclease III Xth [Xanthobacter autotrophicus Py2]
          Length = 262

 Score =  224 bits (571), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 122/260 (46%), Positives = 170/260 (65%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSIR R+ +   W+ E  PDI+C+QE K + + FP E  + L Y++   GQK
Sbjct: 1   MRIATWNVNSIRQRLDHAVRWLGETRPDIVCIQEIKCQTEAFPKEAFEQLGYNVTVHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVA+LS+    ++   L GDD DVQARFIEA  ++    +R+  LYLP+GNP+ + K
Sbjct: 61  GFNGVALLSRLPLEDVTHGLAGDDGDVQARFIEAVVSVKGGVVRVACLYLPNGNPVDTEK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ +++R   FA+ RL+LEEPLI AGD+N+IP+  D  +P  W  DA F    R +F
Sbjct: 121 YPYKLGFMERLEAFAADRLKLEEPLILAGDFNVIPEARDAADPSAWVGDALFLPRTRSAF 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + L ++G TDA+RAT D   LY+FWDY A +W ++ GIRIDH++LSP+A   L +  ID 
Sbjct: 181 RSLTHLGLTDALRATSDAGRLYTFWDYQAGAWQRDMGIRIDHLLLSPQAADKLIATGIDK 240

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
             R W KPSDH P+   L I
Sbjct: 241 HVRAWEKPSDHVPIWADLAI 260


>gi|260545435|ref|ZP_05821176.1| exodeoxyribonuclease III [Brucella abortus NCTC 8038]
 gi|260096842|gb|EEW80717.1| exodeoxyribonuclease III [Brucella abortus NCTC 8038]
          Length = 279

 Score =  224 bits (571), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 143/260 (55%), Positives = 192/260 (73%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+NS++ARI NL  W++E++PDI+CLQE K+ D+ FP   +++L YH+ET GQK
Sbjct: 20  MKIATWNINSVKARIDNLQHWLRESSPDIVCLQEIKSVDEQFPRLEIEALGYHVETHGQK 79

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVA+LSK  P EI   LPGDD D QARFIE  ++ +T  +R+ +LYLP+GNPI + K
Sbjct: 80  GFNGVALLSKKSPDEINKGLPGDDSDEQARFIEGIYSTDTGVVRVVSLYLPNGNPIDTEK 139

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+SW++R   +A +RL LEEPL+ AGDYN+IP+P D  NP  W  DA F  + RQ+F
Sbjct: 140 FPYKLSWMQRLENWAKKRLTLEEPLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAF 199

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           ++L+N+GFTDAIRA+ D   +YSFWDY A +W KN GIRIDH+MLSPEAT+   SA I+ 
Sbjct: 200 RRLENLGFTDAIRASTDESGVYSFWDYQAGAWQKNNGIRIDHLMLSPEATNRFISANIEK 259

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
             R W KPSDH PV V+L +
Sbjct: 260 HVRAWEKPSDHVPVTVTLAV 279


>gi|260574689|ref|ZP_05842692.1| exodeoxyribonuclease III Xth [Rhodobacter sp. SW2]
 gi|259023106|gb|EEW26399.1| exodeoxyribonuclease III Xth [Rhodobacter sp. SW2]
          Length = 263

 Score =  224 bits (570), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 120/259 (46%), Positives = 161/259 (62%), Gaps = 1/259 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A++N+N I+ARI  L AW+ +  PD++ LQE K+ D+ FP    + L Y +ET GQK
Sbjct: 5   MKIASFNINGIKARIEALPAWLADAAPDVVVLQEIKSVDEGFPRGLFEDLGYRVETHGQK 64

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVAILSK    ++   LPGD  D QAR+IEAT  I  + +R+  LY P+GNP    K
Sbjct: 65  GFNGVAILSKLPLEDVTRGLPGDPTDEQARWIEAT-VIGARAVRVAGLYAPNGNPAPGPK 123

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           YD K+ W+ R    A   L  EEP++ AGDYN+IPQ  D   P  W  DA +  + R + 
Sbjct: 124 YDYKLGWMARMRERALGLLATEEPVVLAGDYNVIPQAMDAAKPEAWLEDALYLPQSRAAL 183

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q++ N+G+ DA R  H     YSFWDY A +W +N GIRIDH++LSP+A+ LL  A ID 
Sbjct: 184 QRIVNLGYADAFRLRHPGPGHYSFWDYQAGAWERNNGIRIDHLLLSPQASDLLRDAGIDK 243

Query: 244 KPRGWTKPSDHTPVIVSLD 262
             R   KPSDH PV + LD
Sbjct: 244 AVRAGDKPSDHVPVWIDLD 262


>gi|218463283|ref|ZP_03503374.1| exodeoxyribonuclease III protein [Rhizobium etli Kim 5]
          Length = 263

 Score =  223 bits (569), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 139/260 (53%), Positives = 190/260 (73%), Gaps = 1/260 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT N+N ++ARI NL  W+K+++PDI+CLQE KT D+ FP   +++L YH+ET GQK
Sbjct: 1   MKIATCNINGVKARIDNLTQWLKDSDPDIVCLQEIKTIDEGFPRLEIEALGYHVETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL-RIGNLYLPHGNPITST 122
            +NGVAILSK  P E+   LPGD LD Q+RF+EA FT+    + R+  +YLP+GNP+ + 
Sbjct: 61  GFNGVAILSKTSPSEVNRGLPGDALDEQSRFLEAVFTLPNTRILRVCCIYLPNGNPVETE 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           KY  K++W++R   FA++RL  EE L+ AGDYN+IP+PHDC++P +WENDA F  + R++
Sbjct: 121 KYPYKLAWMERLRSFAAERLAYEEMLVLAGDYNVIPEPHDCFDPKVWENDALFLPQTREA 180

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F++L+N+G TDA+RAT D   LYSFWDY A +W KN GIRIDH++LSPEA   + SA I+
Sbjct: 181 FRRLENLGLTDAVRATTDATRLYSFWDYQAGAWPKNNGIRIDHLLLSPEAADRMTSAAIE 240

Query: 243 TKPRGWTKPSDHTPVIVSLD 262
              R W KPSDH PVI   D
Sbjct: 241 KHVRAWEKPSDHVPVIAYFD 260


>gi|221639069|ref|YP_002525331.1| Exodeoxyribonuclease III [Rhodobacter sphaeroides KD131]
 gi|221159850|gb|ACM00830.1| Exodeoxyribonuclease III [Rhodobacter sphaeroides KD131]
          Length = 268

 Score =  223 bits (569), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 121/258 (46%), Positives = 169/258 (65%), Gaps = 1/258 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+N+N ++AR+  L AW++   PD++ LQE K+ D+ FP    +   +H+ET GQK
Sbjct: 10  MKIATFNINGVKARLEALLAWLEAAEPDVVLLQEIKSVDEGFPRAAFEEKGWHLETHGQK 69

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVAILS+    ++V  LPGD  DVQAR+IEAT  +  + +R+  LYLP+GNP    K
Sbjct: 70  GFNGVAILSRLPLEDVVRGLPGDPEDVQARWIEAT-VVGERAVRVCGLYLPNGNPAPGPK 128

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           YD K+ W++R    A++ L  EEP++ AGDYN+IPQ  D   P +W  DA F  E R +F
Sbjct: 129 YDYKLGWMERMKTRAAELLATEEPVVLAGDYNVIPQAEDAARPEVWVTDALFLPESRAAF 188

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           +++ N+G+T+A RA       YSFWDY A +W KN GIRIDH++LSP+A  L+   RID 
Sbjct: 189 RRILNLGYTEAFRARTFGPGHYSFWDYQAGAWEKNNGIRIDHLLLSPQAADLMTDVRIDR 248

Query: 244 KPRGWTKPSDHTPVIVSL 261
           + R   KPSDH PV V L
Sbjct: 249 EVRSGEKPSDHVPVWVEL 266


>gi|163735846|ref|ZP_02143275.1| exodeoxyribonuclease III, putative [Roseobacter litoralis Och 149]
 gi|161390932|gb|EDQ15272.1| exodeoxyribonuclease III, putative [Roseobacter litoralis Och 149]
          Length = 260

 Score =  223 bits (569), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 125/258 (48%), Positives = 165/258 (63%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+N+N I+ARI  L AW+KE  PD+  LQE K+ D+ FP    + + Y++ET GQK
Sbjct: 1   MKIATFNINGIKARIDALPAWLKEAQPDVALLQEIKSVDEAFPRSVFEDMGYNLETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           S+NGVAILSK    ++   LPGD+ D QAR+IEAT   +T  +R+  LYLP+GNP    K
Sbjct: 61  SFNGVAILSKLPLEDVTRGLPGDESDEQARYIEATVMGDTAPVRVCGLYLPNGNPAPGPK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           YD K+ W+ R      + L  E   + AGDYNIIPQ  D   P  W +DA F LE R +F
Sbjct: 121 YDYKLDWMARLYDRVKELLADETTFVMAGDYNIIPQAEDAAKPESWRDDALFRLESRTAF 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           +KL N+G T+A RA       YSFWDY A +W++N GIRIDH++LSP+A  +L   +ID 
Sbjct: 181 RKLINLGLTEAFRARTAGPGHYSFWDYQAGAWNRNNGIRIDHLLLSPQAADMLVDCQIDK 240

Query: 244 KPRGWTKPSDHTPVIVSL 261
             RG  KPSDH PV + L
Sbjct: 241 DVRGRDKPSDHVPVWIDL 258


>gi|91977274|ref|YP_569933.1| exodeoxyribonuclease III [Rhodopseudomonas palustris BisB5]
 gi|91683730|gb|ABE40032.1| Exodeoxyribonuclease III [Rhodopseudomonas palustris BisB5]
          Length = 263

 Score =  223 bits (568), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 132/259 (50%), Positives = 177/259 (68%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+R RI +L +W+K   PD++CLQE K  D+ FP E +++L Y+I T GQK
Sbjct: 1   MRIATWNVNSVRQRIDHLVSWLKACEPDVVCLQEIKCVDEAFPREPIEALGYNIVTHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           ++NGVA+LSKY   E    L GD+ DV ARF+E   ++    +R+  LYLP+GNP+ + K
Sbjct: 61  TFNGVALLSKYPLEEATPRLAGDETDVHARFLEGVVSLKRGVVRVACLYLPNGNPVETEK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+SW+ R L+++ +RL+ EEPLI AGD+N+IPQ  D YNP  W +DA F  + R+SF
Sbjct: 121 YPYKLSWMSRLLQYSKERLKTEEPLILAGDFNVIPQASDVYNPAGWVDDALFRPQTRESF 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q L  +G TDA+RAT D    Y+FWDY A +W KN GIRIDH++LSP+AT  L    ID+
Sbjct: 181 QALLGLGLTDALRATTDAPGQYTFWDYQAGAWQKNWGIRIDHLLLSPQATDRLVGVGIDS 240

Query: 244 KPRGWTKPSDHTPVIVSLD 262
             R W KPSDH PV    D
Sbjct: 241 HVRSWEKPSDHVPVWADFD 259


>gi|77463209|ref|YP_352713.1| exodeoxyribonuclease III [Rhodobacter sphaeroides 2.4.1]
 gi|77387627|gb|ABA78812.1| Exodeoxyribonuclease III [Rhodobacter sphaeroides 2.4.1]
          Length = 259

 Score =  223 bits (568), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 121/258 (46%), Positives = 169/258 (65%), Gaps = 1/258 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+N+N ++AR+  L AW++   PD++ LQE K+ D+ FP    +   +H+ET GQK
Sbjct: 1   MKIATFNINGVKARLEALLAWLEAAEPDVVLLQEIKSVDEGFPRAAFEDKGWHLETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVAILS+    ++V  LPGD  DVQAR+IEAT  +  + +R+  LYLP+GNP    K
Sbjct: 61  GFNGVAILSRLPLEDVVRGLPGDPEDVQARWIEAT-VVGERAVRVCGLYLPNGNPAPGPK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           YD K+ W++R    A++ L  EEP++ AGDYN+IPQ  D   P +W  DA F  E R +F
Sbjct: 120 YDYKLGWMERMKARAAELLATEEPVVLAGDYNVIPQAEDAARPEVWVTDALFLPESRAAF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           +++ N+G+T+A RA       YSFWDY A +W KN GIRIDH++LSP+A  L+   RID 
Sbjct: 180 RRIVNLGYTEAFRARTFGPGHYSFWDYQAGAWEKNNGIRIDHLLLSPQAADLMTDVRIDR 239

Query: 244 KPRGWTKPSDHTPVIVSL 261
           + R   KPSDH PV V L
Sbjct: 240 EVRSGEKPSDHVPVWVEL 257


>gi|126462083|ref|YP_001043197.1| exodeoxyribonuclease III [Rhodobacter sphaeroides ATCC 17029]
 gi|126103747|gb|ABN76425.1| Exodeoxyribonuclease III [Rhodobacter sphaeroides ATCC 17029]
          Length = 259

 Score =  223 bits (568), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 121/258 (46%), Positives = 169/258 (65%), Gaps = 1/258 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+N+N ++AR+  L AW++   PD++ LQE K+ D+ FP    +   +H+ET GQK
Sbjct: 1   MKIATFNINGVKARLEALLAWLEAAEPDVVLLQEIKSVDEGFPRAAFEDKGWHLETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVAILS+    ++V  LPGD  DVQAR+IEAT  +  + +R+  LYLP+GNP    K
Sbjct: 61  GFNGVAILSRLPLEDVVRGLPGDPEDVQARWIEAT-VVGERAVRVCGLYLPNGNPAPGPK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           YD K+ W++R    A++ L  EEP++ AGDYN+IPQ  D   P +W  DA F  E R +F
Sbjct: 120 YDYKLGWMERMKARAAELLATEEPVVLAGDYNVIPQAEDAARPEVWVTDALFLPESRAAF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           +++ N+G+T+A RA       YSFWDY A +W KN GIRIDH++LSP+A  L+   RID 
Sbjct: 180 RRILNLGYTEAFRARTFGPGHYSFWDYQAGAWEKNNGIRIDHLLLSPQAADLMTDVRIDR 239

Query: 244 KPRGWTKPSDHTPVIVSL 261
           + R   KPSDH PV V L
Sbjct: 240 EVRSGEKPSDHVPVWVEL 257


>gi|121605670|ref|YP_982999.1| exodeoxyribonuclease III Xth [Polaromonas naphthalenivorans CJ2]
 gi|120594639|gb|ABM38078.1| Exodeoxyribonuclease III [Polaromonas naphthalenivorans CJ2]
          Length = 260

 Score =  223 bits (567), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 93/260 (35%), Positives = 137/260 (52%), Gaps = 1/260 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+  R+  +  W+  N  D++CLQE K  D  FP + L++  Y     GQK
Sbjct: 1   MKIATWNVNSLTVRLPQVLDWLAANPVDVLCLQELKLSDDKFPLQELEAAGYQSAVFGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAILS+     IV ++ G   +       AT  + T  +R+ N Y  +G    S K
Sbjct: 61  TYNGVAILSRTPARNIVKNITGFTDEQSRVI-AATLDMPTGEVRVVNGYFVNGQSPGSEK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           ++ K+ W++    +  + L     L+  GD+NI     D Y+P         T E RQ F
Sbjct: 120 FEYKMKWLESLRNWLREELAEHPNLVLLGDFNITADDRDSYDPEGLRETIHHTSEERQHF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q L  +G  DA R        YS+WDY   ++ +N+G+RIDHI++S     L+ S  ID 
Sbjct: 180 QALVKLGLNDAFRMFDQPEKSYSWWDYREMAFRRNRGLRIDHILVSEALKPLVRSCVIDK 239

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
            PR   +PSDH PV++ LD+
Sbjct: 240 LPRKNERPSDHVPVVLELDL 259


>gi|225023438|ref|ZP_03712630.1| hypothetical protein EIKCOROL_00296 [Eikenella corrodens ATCC
           23834]
 gi|224943787|gb|EEG24996.1| hypothetical protein EIKCOROL_00296 [Eikenella corrodens ATCC
           23834]
          Length = 255

 Score =  222 bits (566), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 94/259 (36%), Positives = 139/259 (53%), Gaps = 4/259 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS++ R+ +++ W+ ++ PD++CLQE K +   FP    + L Y     GQK
Sbjct: 1   MKIATWNVNSLKVRLPHVSDWLIQHQPDVLCLQELKLDQDQFPLSAFEMLGYRAVWSGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAILSK +   + T LP    D Q R I AT       +R+ ++Y  +G  + S K
Sbjct: 61  TYNGVAILSKEEVQNVHTGLPALPNDPQRRVIAATIGG----VRVVDVYCVNGEAVGSEK 116

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K  W      F    L     L+  GD+NI P   D Y+P  W+     + E R  F
Sbjct: 117 FAYKQQWFAALAEFIRSELAQYPELVLLGDFNIAPADLDVYDPEKWQGKILCSAEERAWF 176

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q L ++G TD++R  H    LY++WDY  + + +  G+RIDHI+ S      L +A +DT
Sbjct: 177 QTLLDLGLTDSLRRLHPAEPLYTWWDYRMNMFRRKLGLRIDHILASQALLPRLAAAGVDT 236

Query: 244 KPRGWTKPSDHTPVIVSLD 262
            PR   +PSDH PV    +
Sbjct: 237 APRALERPSDHAPVWAEFE 255


>gi|149914968|ref|ZP_01903497.1| exodeoxyribonuclease III [Roseobacter sp. AzwK-3b]
 gi|149811156|gb|EDM70993.1| exodeoxyribonuclease III [Roseobacter sp. AzwK-3b]
          Length = 260

 Score =  222 bits (565), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 117/259 (45%), Positives = 163/259 (62%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A++N+N I+AR   L  W+ E  PD++ LQE K+ D+ FP E  +   Y +ET GQK
Sbjct: 1   MKIASFNINGIKARAQALTDWLDEAQPDVVVLQEIKSVDEGFPCELFEDRGYRVETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           S+NGVAILS+    ++   LPGDD D QAR+IE T   +   +R+  LYLP+GNP    K
Sbjct: 61  SFNGVAILSRLPLEDVTRGLPGDDEDEQARWIEGTVIGDKAAVRVCGLYLPNGNPAPGPK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           YD K++W++R    A   L  EEP + AGDYN+IPQ  D   P  W  DA    E R +F
Sbjct: 121 YDYKLAWMERLKARAEALLAAEEPALMAGDYNVIPQDEDAKRPEAWRKDALALPETRAAF 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           +++ N+GFT+A RA H     Y+FWDY A +W+++ GIRIDH +L+P+A  LL   +ID 
Sbjct: 181 RRIVNLGFTEAFRAFHKGPSHYTFWDYQAGAWNRDDGIRIDHFLLTPQAADLLGDCQIDR 240

Query: 244 KPRGWTKPSDHTPVIVSLD 262
             R   KPSDH P+ ++LD
Sbjct: 241 DIRDREKPSDHVPIWITLD 259


>gi|158424436|ref|YP_001525728.1| exodeoxyribonuclease III [Azorhizobium caulinodans ORS 571]
 gi|158331325|dbj|BAF88810.1| exodeoxyribonuclease III [Azorhizobium caulinodans ORS 571]
          Length = 262

 Score =  222 bits (565), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 120/260 (46%), Positives = 168/260 (64%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+R R  +  AW+KE  PD++CLQE K + + FP E  ++L Y++   GQK
Sbjct: 1   MRIATWNVNSVRLRTEHAVAWLKEAQPDVVCLQEIKCQTEQFPREPFEALGYNVAVHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVAILSK    ++   L GDD DVQARFIEA  ++    +R+  +YLP+GNP  + K
Sbjct: 61  GFNGVAILSKRPLEDVTNGLAGDDSDVQARFIEAVVSVPGGVVRVCCIYLPNGNPPQTEK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           YD K+ ++ R   F   RL+LEEPLI AGD+N+IP   D  +P  W  DA +    R +F
Sbjct: 121 YDYKLGFMARLKAFTESRLKLEEPLILAGDFNVIPDARDAADPAAWVEDALYLPRTRAAF 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           +++ N+G TDA+RAT D   L++FWDY A +W ++ GIRIDH++LSP+A   L  A ID 
Sbjct: 181 REIINLGMTDALRATSDAERLFTFWDYQAGAWQRDFGIRIDHLLLSPQAADRLIGAGIDK 240

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
             R   +PSDH P  + L +
Sbjct: 241 HLRALERPSDHVPAWIDLKM 260


>gi|254509791|ref|ZP_05121858.1| exodeoxyribonuclease III [Rhodobacteraceae bacterium KLH11]
 gi|221533502|gb|EEE36490.1| exodeoxyribonuclease III [Rhodobacteraceae bacterium KLH11]
          Length = 259

 Score =  222 bits (565), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 126/260 (48%), Positives = 171/260 (65%), Gaps = 1/260 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+N+N I+AR   L  W+ +  PD++ LQE K+ D+NFP E  +   Y++E  GQK
Sbjct: 1   MKIATFNINGIKARAEALPRWLDDAQPDVVLLQEIKSIDENFPREIFEDRGYNVEAHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           S+NGVAILSK Q  ++   LPGDD+D QAR+IEAT  +  + +RI  LYLP+GNP+   K
Sbjct: 61  SFNGVAILSKLQLEDVTRGLPGDDMDEQARWIEAT-VVGKKAVRICGLYLPNGNPVPGPK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           YD K++W++R    A   L  EEP + AGDYNIIPQ  D   P  W  DA F  E R ++
Sbjct: 120 YDYKLAWMERLYDRARALLAAEEPALMAGDYNIIPQAEDAKRPNAWREDALFRPESRAAY 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           +K+ N+GFT+A RA       YSFWDY A +W+KN GIRIDH +L+P+   L+   RID+
Sbjct: 180 RKILNLGFTEAFRARTQGPGHYSFWDYQAGAWNKNDGIRIDHFLLTPQTADLMRDCRIDS 239

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
           + RG  KPSDH PV + LD+
Sbjct: 240 EVRGHEKPSDHVPVWIDLDL 259


>gi|167647089|ref|YP_001684752.1| exodeoxyribonuclease III Xth [Caulobacter sp. K31]
 gi|167349519|gb|ABZ72254.1| exodeoxyribonuclease III Xth [Caulobacter sp. K31]
          Length = 262

 Score =  221 bits (564), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 109/262 (41%), Positives = 151/262 (57%), Gaps = 2/262 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+ AR+  +  W +   PD+  LQE K  D+ FP E  + L Y++   GQK
Sbjct: 1   MRIATWNVNSVNARLERVLEWFESAAPDVAVLQEIKCIDEKFPTEAFERLGYNVAVHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT--QTLRIGNLYLPHGNPITS 121
           +YNGVA+LSK+   ++   LP    D           +       R+  +YLP+GNP+ +
Sbjct: 61  TYNGVAMLSKFPLEDVRRGLPFLHDDEVDEQSRYIEAVIGAPTPFRMVGIYLPNGNPVDT 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            K+D K++W++R    A   L LEEPL+ AGDYN+IP+  D  NP  W NDA F LE R 
Sbjct: 121 EKFDYKLAWMRRLHAHAQGLLALEEPLVIAGDYNVIPEVEDVANPEAWVNDALFRLESRG 180

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           +F+ L+N+G TDA          Y+FWDY A +W +N GIRIDH++LSP+A   L    I
Sbjct: 181 AFRALKNLGLTDAYMQADGAPGGYTFWDYQAGAWPRNLGIRIDHLLLSPQAADKLAGVVI 240

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
               R   KPSDH PV+  L +
Sbjct: 241 HRDERDKEKPSDHVPVVAELAL 262


>gi|260433435|ref|ZP_05787406.1| exodeoxyribonuclease III [Silicibacter lacuscaerulensis ITI-1157]
 gi|260417263|gb|EEX10522.1| exodeoxyribonuclease III [Silicibacter lacuscaerulensis ITI-1157]
          Length = 259

 Score =  221 bits (564), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 125/260 (48%), Positives = 171/260 (65%), Gaps = 1/260 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A++N+N I+AR   L  W+ +  PD+  LQE K+ D+NFP E  +   Y++ET GQK
Sbjct: 1   MKIASFNINGIKARADALLRWLDDARPDVAVLQEIKSVDENFPREIFEERGYNVETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           S+NGVA+LSK    ++   LPGDD D QAR+IEAT  +  + LRI  LYLP+GNP    K
Sbjct: 61  SFNGVAVLSKLPLEDVTRGLPGDDDDEQARWIEAT-VVGKKALRICGLYLPNGNPAPGPK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +D K++W++R  + A + L+ EEP + AGDYN+IPQ  D   P  W  DA F  E R +F
Sbjct: 120 FDYKLAWMERLHQRAVELLKSEEPALMAGDYNVIPQAEDAKRPEAWREDALFRSESRAAF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           +++ N+GFTDA RA       Y+FWDY A +W++N GIRIDH +L+P+A  LL   RID 
Sbjct: 180 RRILNLGFTDAFRARTQGPGHYTFWDYQAGAWNRNDGIRIDHFLLTPQAADLLQDCRIDA 239

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
           + RG  KPSDH P+ V LDI
Sbjct: 240 EVRGQEKPSDHVPIWVDLDI 259


>gi|254464825|ref|ZP_05078236.1| exodeoxyribonuclease III [Rhodobacterales bacterium Y4I]
 gi|206685733|gb|EDZ46215.1| exodeoxyribonuclease III [Rhodobacterales bacterium Y4I]
          Length = 268

 Score =  221 bits (564), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 130/269 (48%), Positives = 168/269 (62%), Gaps = 10/269 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+N+N I+AR   L  W+ E  PD++ LQE K+ D+ FP E  +   Y++ET GQK
Sbjct: 1   MKIATFNINGIKARAQALPDWLDEAQPDVVVLQEIKSVDEAFPREIFEERGYNVETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122
           S+NGVAILSK    ++   LPGDD D QAR+IEAT T   Q +RI  LYLP+GNP+    
Sbjct: 61  SFNGVAILSKLPLEDVRRGLPGDDSDEQARWIEATVTG-KQAIRICGLYLPNGNPVELEA 119

Query: 123 --------KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
                   KY  K++W++R    A   L  E P + AGDYNIIPQ  D   P  W  DA 
Sbjct: 120 DGSPVAGGKYAYKLAWMERLKARAEALLADEMPALMAGDYNIIPQAEDAKRPEAWAEDAL 179

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
           F  + R +FQ++ N+GFT+A RA H     YSFWDY A +W++N GIRIDHI+L+P+A  
Sbjct: 180 FRPQSRAAFQRIVNLGFTEAFRARHQGPGHYSFWDYQAGAWNRNDGIRIDHILLTPQAAD 239

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           LL   +ID   RG  KPSDH PV V LDI
Sbjct: 240 LLLDCQIDKDVRGREKPSDHVPVWVELDI 268


>gi|319792482|ref|YP_004154122.1| exodeoxyribonuclease iii xth [Variovorax paradoxus EPS]
 gi|315594945|gb|ADU36011.1| exodeoxyribonuclease III Xth [Variovorax paradoxus EPS]
          Length = 261

 Score =  221 bits (564), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 95/258 (36%), Positives = 138/258 (53%), Gaps = 1/258 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+ AR+ ++  W+  N  D++CLQE K  D  FP E L+S  Y     GQK
Sbjct: 1   MKIATWNVNSLTARLQHVLDWLIANPVDVLCLQELKMTDDKFPLEVLKSAGYEAAVFGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAILS     ++V ++ G   +       AT    T  LR+ N Y  +G    S K
Sbjct: 61  TYNGVAILSLAPMRDVVKNIGGFTDEQSRVI-AATVETPTGPLRVVNGYFVNGQAPGSDK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           ++ K+ W+     +  Q L     L+  GD+NI P+  D ++P+  +     T E R+ F
Sbjct: 120 FEYKLKWLDALRDWLRQELVAHPNLVLLGDFNITPEDRDSFDPVGLKETIHHTTEEREHF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + L  +G TD+ R        YS+WDY    + KN+G+RIDHI++S      +    ID 
Sbjct: 180 KALLGLGLTDSFRMFEQPEKSYSWWDYRMLGYQKNRGLRIDHILVSETLLPRVKGCIIDR 239

Query: 244 KPRGWTKPSDHTPVIVSL 261
            PR W KPSDH PV++ L
Sbjct: 240 VPRKWEKPSDHAPVVLDL 257


>gi|89055306|ref|YP_510757.1| exodeoxyribonuclease III [Jannaschia sp. CCS1]
 gi|88864855|gb|ABD55732.1| Exodeoxyribonuclease III [Jannaschia sp. CCS1]
          Length = 261

 Score =  221 bits (564), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 128/259 (49%), Positives = 170/259 (65%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           ++ +AT+N+N ++ARI  L  W+ E  PD+  LQE K+ D+NFP E L+   Y +ET GQ
Sbjct: 1   MMRIATFNINGVKARIGALGDWLDEAKPDVALLQEIKSVDENFPREMLEDRGYTVETHGQ 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K +NGVAILSK    ++   LPGDD D QAR+IEAT   +TQ +R+  LYLP+GNP    
Sbjct: 61  KGFNGVAILSKLPLEDVSRGLPGDDTDEQARWIEATVMGDTQAVRVCGLYLPNGNPTPGP 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           KYD K++W++R  R A   L  E P++ AGDYNIIPQ  D   P +W++DA    E R +
Sbjct: 121 KYDYKLAWMERMHRHAQGLLASEMPVVMAGDYNIIPQDADAARPEVWQDDALARSESRAA 180

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F++L  +GFT+A RA +    +YSFWDY A +W+KN GIRIDH +LSPEA  LL    I+
Sbjct: 181 FRRLLALGFTEAFRARNQAPGMYSFWDYQAGAWNKNDGIRIDHHLLSPEAADLLQECWIE 240

Query: 243 TKPRGWTKPSDHTPVIVSL 261
              RG  KPSDH PV + L
Sbjct: 241 KDVRGRDKPSDHVPVWIDL 259


>gi|170740918|ref|YP_001769573.1| exodeoxyribonuclease III Xth [Methylobacterium sp. 4-46]
 gi|168195192|gb|ACA17139.1| exodeoxyribonuclease III Xth [Methylobacterium sp. 4-46]
          Length = 270

 Score =  221 bits (563), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 123/265 (46%), Positives = 172/265 (64%), Gaps = 2/265 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + TWNVNSIR R+ +L A+++E  PD++CLQE K  D++FP   ++   Y + T GQK
Sbjct: 1   MRITTWNVNSIRQRLGHLLAFLEEAKPDVVCLQELKCVDESFPRTEIEEAGYVVATHGQK 60

Query: 64  SYNGVAILSKYQP--IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           ++NGVA+L++      E+   LPGD  D QAR+IEA        LR+ ++YLP+GNP+ +
Sbjct: 61  AFNGVALLARQPLPLRELRRGLPGDPEDAQARYIEALIPTPAANLRVASIYLPNGNPVGT 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            K+DDK+++++R    A Q  E EE L+ AGDYN+IP+P D  +P  W  DA F  E R 
Sbjct: 121 PKFDDKLAFLRRLTAHARQLREREEVLVLAGDYNVIPEPVDVADPAAWLGDALFRPESRA 180

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           +F+ L N GF DA+RA  +   LY+FWDY A +W +N GIRIDH++LSP+A   L SA +
Sbjct: 181 AFRALLNEGFADALRACDERPGLYTFWDYQAGAWPRNLGIRIDHLLLSPQALDRLVSASV 240

Query: 242 DTKPRGWTKPSDHTPVIVSLDIPEP 266
               RG  KPSDH PV V LD+  P
Sbjct: 241 QKHLRGLEKPSDHVPVTVELDLDRP 265


>gi|222085777|ref|YP_002544307.1| exodeoxyribonuclease III protein [Agrobacterium radiobacter K84]
 gi|221723225|gb|ACM26381.1| exodeoxyribonuclease III protein [Agrobacterium radiobacter K84]
          Length = 263

 Score =  221 bits (563), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 148/260 (56%), Positives = 193/260 (74%), Gaps = 1/260 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+N ++ARI NL  W+K+++PDI CLQE KT D+ FP   +++L YH+ET GQK
Sbjct: 1   MKIATWNINGVKARIENLCQWLKDSDPDIACLQEIKTVDEGFPRLEIEALGYHVETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT-LRIGNLYLPHGNPITST 122
            +NGVAILSK +P E+   LPGDD D QARFIEA F++     LR+  LYLP+GNP+ + 
Sbjct: 61  GFNGVAILSKAKPDEVTRGLPGDDSDEQARFIEAVFSVPDHGALRVCCLYLPNGNPVDTE 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           KY  K++W++R  +FA+ RL LEEP+I AGDYN+IP+PHDC++P +WENDA F  + RQ+
Sbjct: 121 KYPYKLAWMERLRKFAADRLALEEPIILAGDYNVIPEPHDCFDPKVWENDALFLPQTRQA 180

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F++L+N+GFTDA+R T D   LYSFWDY A +W KN GIRIDH+MLSPEA   L S  I+
Sbjct: 181 FRQLENLGFTDAVRTTTDAVKLYSFWDYQAGAWPKNNGIRIDHLMLSPEAADRLTSTAIE 240

Query: 243 TKPRGWTKPSDHTPVIVSLD 262
              R W KPSDH PVI  LD
Sbjct: 241 KHMRAWEKPSDHVPVIAHLD 260


>gi|16126254|ref|NP_420818.1| exodeoxyribonuclease III [Caulobacter crescentus CB15]
 gi|221235027|ref|YP_002517463.1| exodeoxyribonuclease III [Caulobacter crescentus NA1000]
 gi|13423482|gb|AAK23986.1| exodeoxyribonuclease III [Caulobacter crescentus CB15]
 gi|220964199|gb|ACL95555.1| exodeoxyribonuclease III [Caulobacter crescentus NA1000]
          Length = 262

 Score =  221 bits (563), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 109/262 (41%), Positives = 147/262 (56%), Gaps = 2/262 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSI AR+  + AW +   PD+  LQE K  D+ FP E  + L Y++   GQK
Sbjct: 1   MRIATWNVNSINARLEGVLAWFESEAPDVAVLQEIKCVDEKFPTEAFERLGYNVAVHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN--TQTLRIGNLYLPHGNPITS 121
           +YNGVA+LSK+   ++   LP    D           +       R+  +YLP+GNPI +
Sbjct: 61  TYNGVALLSKHPIEDVRKGLPFLSEDEVDEQARYIEAVIAAPTPFRVVGIYLPNGNPIGT 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            K+  K+SW++R    A   L  EEPL+ AGDYN+IP+  D  NP  W  DA F  E R 
Sbjct: 121 EKFAYKLSWMRRLHAHAQGLLAFEEPLVIAGDYNVIPEVEDVANPQAWLGDALFQPESRA 180

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           +F+ L+N+GF DA          Y+FWDY A +W +N GIRIDH++LSP+A   L    I
Sbjct: 181 AFRALKNLGFADAYMQADGAPGGYTFWDYQAGAWQRNLGIRIDHLLLSPQAADRLTGLVI 240

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
               R   KPSDH PV+    I
Sbjct: 241 HRDERDKEKPSDHVPVVGRFRI 262


>gi|254475570|ref|ZP_05088956.1| exodeoxyribonuclease III [Ruegeria sp. R11]
 gi|214029813|gb|EEB70648.1| exodeoxyribonuclease III [Ruegeria sp. R11]
          Length = 268

 Score =  221 bits (563), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 128/269 (47%), Positives = 168/269 (62%), Gaps = 10/269 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+N+N I+ARI+ L  W+ +  PD++ LQE K+ D+ FP E  +   Y++ET GQK
Sbjct: 1   MKIATFNINGIKARINALPEWLDDAQPDVVVLQEIKSVDEAFPRELFEDRGYNVETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122
           S+NGVAILSK    ++   LPGDD D QAR+IEAT  +  Q +RI  LYLP+GNP+    
Sbjct: 61  SFNGVAILSKLPLEDVRRGLPGDDSDEQARWIEAT-VVGKQAIRICGLYLPNGNPVELNA 119

Query: 123 --------KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
                   KY  K++W++R    A   L+ E P + AGDYNIIPQ  D   P  W  DA 
Sbjct: 120 DGTPVEGGKYAYKLAWMERMRARAQALLDEEMPALMAGDYNIIPQAEDAKKPEAWLEDAL 179

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
              E R +FQ++ N+GFT+A RA H     YSFWDY A +W +N GIRIDH +LSP+A  
Sbjct: 180 HRTESRAAFQRIVNLGFTEAFRARHQGPGHYSFWDYQAGAWQRNNGIRIDHFLLSPQAAD 239

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           L+   +ID   RG  KPSDH PV V LDI
Sbjct: 240 LMLDCQIDKDVRGRDKPSDHVPVWVELDI 268


>gi|295688833|ref|YP_003592526.1| exodeoxyribonuclease III Xth [Caulobacter segnis ATCC 21756]
 gi|295430736|gb|ADG09908.1| exodeoxyribonuclease III Xth [Caulobacter segnis ATCC 21756]
          Length = 262

 Score =  221 bits (562), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 106/257 (41%), Positives = 147/257 (57%), Gaps = 2/257 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+ AR+  +  W +   PD+  LQE K  D+ FP E  + L Y++   GQK
Sbjct: 1   MRIATWNVNSVNARLERVLGWFEAEAPDVAVLQEIKCVDEKFPAEAFERLGYNVVVHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT--QTLRIGNLYLPHGNPITS 121
           +YNGVA+LSK+   ++   LP    D           +       R+  +YLP+GNPI +
Sbjct: 61  TYNGVALLSKHPVEDVRKGLPFLSEDEVDEQARYVEAVIGAQTPFRVVGIYLPNGNPIGT 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            K+D K++W++R    A   L  EE L+ AGDYN+IP+  D  NP  W  DA F  E R 
Sbjct: 121 EKFDYKLAWMRRLHAHAQNLLAFEENLVIAGDYNVIPEAQDVANPEAWLGDALFRPESRA 180

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           +F+ L+N+G TDA   T      Y+FWDY A +W +N GIRIDH++LSP+A   L +  I
Sbjct: 181 AFRALKNLGLTDAYMQTDGAPGGYTFWDYQAGAWQRNLGIRIDHLLLSPQAADRLENVVI 240

Query: 242 DTKPRGWTKPSDHTPVI 258
               R   KPSDH PV+
Sbjct: 241 HRDERDKEKPSDHVPVV 257


>gi|260426641|ref|ZP_05780620.1| exodeoxyribonuclease III [Citreicella sp. SE45]
 gi|260421133|gb|EEX14384.1| exodeoxyribonuclease III [Citreicella sp. SE45]
          Length = 260

 Score =  220 bits (561), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 120/257 (46%), Positives = 160/257 (62%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+N+N I+AR   L  W+ E  PD+  LQE K+ D+ FP E  +   Y++ET GQK
Sbjct: 1   MKIATFNINGIKARHAALLDWLDEAQPDVALLQEIKSVDEGFPREPFEERGYNVETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVAILSK    ++   LPGDD D QAR+IEAT    T  L++  LYLP+GNP    K
Sbjct: 61  GFNGVAILSKLPLEDVTRGLPGDDEDEQARWIEATVVGETHALQLCGLYLPNGNPAPGPK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           YD K++W++R    A   L  E P + AGDYN+IPQ  D   P  W  DA +  + R +F
Sbjct: 121 YDYKLAWMERLEARARALLADEMPAMMAGDYNVIPQAEDAAKPESWTEDALYLPQTRAAF 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           +++ N+GFT+A R  H     YSFWDY A +W +N GIRIDHI+L+P+A  L+   +ID 
Sbjct: 181 RRILNLGFTEAFRTRHPEPGHYSFWDYQAGAWQRNNGIRIDHILLTPQAADLMRDVQIDR 240

Query: 244 KPRGWTKPSDHTPVIVS 260
             RG  KPSDH PV V 
Sbjct: 241 DIRGRDKPSDHVPVWVD 257


>gi|82703533|ref|YP_413099.1| exodeoxyribonuclease III [Nitrosospira multiformis ATCC 25196]
 gi|82411598|gb|ABB75707.1| Exodeoxyribonuclease III [Nitrosospira multiformis ATCC 25196]
          Length = 277

 Score =  220 bits (561), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 86/258 (33%), Positives = 141/258 (54%), Gaps = 5/258 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS++ R+  +  W+  N PD++CLQETK +D++FP   + +  Y     GQK
Sbjct: 1   MKIATWNVNSLKVRLPQVLEWLTLNQPDVLCLQETKLQDEHFPVSEIAAAGYQTIYSGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVA+LS+    E+ T +PG +   +         +    + +     P+G  +TS K
Sbjct: 61  TYNGVALLSRQPVSEVFTGMPGFEDPQKRLLGGVHDDVCVVCIYV-----PNGEHVTSEK 115

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W+     +  + L     L+  GD+NI P+  D ++  +WE    F+   R +F
Sbjct: 116 YQYKLRWLAALREWLREMLSRHRKLVVLGDFNIAPEDCDVHDSKLWEGKVLFSELERAAF 175

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           +++ ++GF D+ R        +++WDY   ++ +N G+RIDHI+LS E   +  +  ID 
Sbjct: 176 REVLDLGFIDSFRLFDQPEKSFTWWDYRMMAFRRNMGLRIDHILLSRELAGMCTACVIDK 235

Query: 244 KPRGWTKPSDHTPVIVSL 261
             R   +PSDH PVIV L
Sbjct: 236 ATRRLERPSDHAPVIVEL 253


>gi|56476029|ref|YP_157618.1| exodeoxyribonuclease III [Aromatoleum aromaticum EbN1]
 gi|56312072|emb|CAI06717.1| Exodeoxyribonuclease III [Aromatoleum aromaticum EbN1]
          Length = 253

 Score =  220 bits (561), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 89/260 (34%), Positives = 141/260 (54%), Gaps = 7/260 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS++ R+ ++  W+  N PD++CLQE K EDK+FP   +++  YH    GQK
Sbjct: 1   MKIATWNVNSLKVRLPHVLDWLAANRPDVLCLQELKLEDKSFPSAEIEAAGYHAAFSGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAILS+     I   +PG D + +              +R+   Y P+G  + S K
Sbjct: 61  TYNGVAILSRSALAGIGHGIPGFDDEQKRVLAATVNG-----VRVICGYFPNGQAVGSEK 115

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W+     +  + L+  + L+  GD+NI P+  D +    W+++   +   R +F
Sbjct: 116 FAYKLRWLAALTEWLREELKAHQRLVLTGDFNIAPEDRDAHPD--WKDEIHVSPAERAAF 173

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             L  +G  DA R        +S+WDY   ++ +N G+RIDHI+LSP    +  +  ID 
Sbjct: 174 AALTGLGLADAYRLFPQDDKSFSWWDYRMGAFRRNFGLRIDHILLSPALRDVCCACTIDK 233

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
            PR   +PSDH PVI  L++
Sbjct: 234 APRKLERPSDHAPVIAELEL 253


>gi|310823161|ref|YP_003955519.1| exodeoxyribonuclease III [Stigmatella aurantiaca DW4/3-1]
 gi|309396233|gb|ADO73692.1| Exodeoxyribonuclease III [Stigmatella aurantiaca DW4/3-1]
          Length = 257

 Score =  220 bits (561), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 103/259 (39%), Positives = 146/259 (56%), Gaps = 5/259 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A+WNVNS+RAR   L  W+K + PD++CLQE K  D +FP E ++   YH  T GQK
Sbjct: 1   MKIASWNVNSVRARQERLLNWLKAHQPDVLCLQELKCVDADFPTEAVREAGYHAVTHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAILSK +P ++V  L     D  AR I AT +     +R+ + Y+P+G  + S  
Sbjct: 61  TYNGVAILSKAEPSDVVLGLSDGVEDSHARLIAATVSG----VRVVSAYVPNGQAVDSPA 116

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W  R  R+   R   ++PL+  GD+N+ P+P D Y+P +WE    FTL+ R + 
Sbjct: 117 YVYKLEWYSRLRRYLEARHTPDQPLVLCGDWNVAPEPIDVYDPAVWEGQTLFTLKERDAL 176

Query: 184 QKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           Q++   G  D  R  H      +S+WDY   S+ KN G+RIDHI  +      L  A ID
Sbjct: 177 QQVCAFGLADTFRKLHPGVEKKFSWWDYRGLSFPKNLGVRIDHIFATAPLVQRLVKAEID 236

Query: 243 TKPRGWTKPSDHTPVIVSL 261
            + R   +PSDH PV    
Sbjct: 237 REERKGKQPSDHAPVWAEF 255


>gi|146277242|ref|YP_001167401.1| exodeoxyribonuclease III Xth [Rhodobacter sphaeroides ATCC 17025]
 gi|145555483|gb|ABP70096.1| Exodeoxyribonuclease III [Rhodobacter sphaeroides ATCC 17025]
          Length = 259

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 123/258 (47%), Positives = 170/258 (65%), Gaps = 1/258 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+N+N I+ARI  + AW++  +PD++ LQE K+ D+ FP    +   +H+ET GQK
Sbjct: 1   MKIATYNINGIKARIEAVLAWLEAASPDVVLLQEIKSVDETFPRAVFEDRGWHLETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVAILS+    ++V  LPGD  DVQAR+IEAT     + +R+  LYLP+GNP    K
Sbjct: 61  GFNGVAILSRLPLEDVVRGLPGDAEDVQARWIEATVVGQ-RAVRVCGLYLPNGNPAPGPK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           YD K++WI R  + A++ LE E+P++ AGDYN+IPQ  D   P  W  DA F  E R +F
Sbjct: 120 YDYKLAWIARMKQRAAELLETEDPVVLAGDYNVIPQAEDAARPEAWVTDALFLPESRAAF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           +++ N+G+T+A RA       YSFWDY A +W KN GIRIDH++LSP+A  L+   RID 
Sbjct: 180 RRILNLGYTEAFRARSFGPGHYSFWDYQAGAWEKNNGIRIDHLLLSPQAADLMTDVRIDR 239

Query: 244 KPRGWTKPSDHTPVIVSL 261
           + R   KPSDH PV V L
Sbjct: 240 EVRAGEKPSDHVPVWVEL 257


>gi|72160662|ref|YP_288319.1| exodeoxyribonuclease III [Thermobifida fusca YX]
 gi|71914394|gb|AAZ54296.1| Exodeoxyribonuclease III [Thermobifida fusca YX]
          Length = 264

 Score =  220 bits (561), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 84/264 (31%), Positives = 127/264 (48%), Gaps = 3/264 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+RAR   +AAW++ ++ D++ LQETK  D  FP      L Y +   G  
Sbjct: 1   MRLATWNVNSVRARSERIAAWLRRSDVDVVALQETKCRDDQFPTAVFTELGYEVAHHGLS 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT-FTINTQTLRIGNLYLPHGNPITST 122
            +NGVAI S+    ++    PG     +    EA   +     +R+ +LY+P+G  I   
Sbjct: 61  QWNGVAIASRVGLSDVQIGFPGQPGWGEPEEAEARAISAVCGGVRVWSLYVPNGREIDHP 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIF--AGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
            Y  K+ W+ R        L  +        GD+NI P   D ++   +E     T   R
Sbjct: 121 HYTYKLQWLARLREAGEAWLSEDPKAQIALCGDWNIAPYDEDVWDMAEFEGRTHVTKPER 180

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            +F  + + GFTD +R       +Y++WDY   ++ K KG+RID I+ SP        A+
Sbjct: 181 DAFHAVVDAGFTDVVRPHAPGPGVYTYWDYKGLAFPKRKGMRIDFILASPALAERATDAK 240

Query: 241 IDTKPRGWTKPSDHTPVIVSLDIP 264
           ID + R     SDH PVI    + 
Sbjct: 241 IDREERKGKGASDHAPVIADFQLD 264


>gi|114766201|ref|ZP_01445201.1| Exodeoxyribonuclease III [Pelagibaca bermudensis HTCC2601]
 gi|114541572|gb|EAU44615.1| Exodeoxyribonuclease III [Roseovarius sp. HTCC2601]
          Length = 260

 Score =  220 bits (560), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 121/258 (46%), Positives = 164/258 (63%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+N+N I+ARI  L  W+ E  PD+  LQE K+ D+ FP E  +   + +ET GQK
Sbjct: 1   MKIATFNINGIKARIGALTDWLDEAQPDVALLQEIKSVDEAFPREHFEERGWQVETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           S+NGVAILSK    ++   LPGDD D QAR+IEAT    +  +R+  LYLP+GNP+   K
Sbjct: 61  SFNGVAILSKLPLEDVTRGLPGDDEDEQARWIEATVIGESHAVRLCGLYLPNGNPVPGPK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           YD K++W+KR    A + L  E P + AGDYN+IPQ  D   P  W  DA +  E R +F
Sbjct: 121 YDYKLAWMKRLEARARELLASEMPAVMAGDYNVIPQAEDAAKPQAWIEDALYLPETRAAF 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           +++ N+GFT+A RA       YSFWDY A +W +N GIRIDH++L+P+A  L+   +ID 
Sbjct: 181 RRILNLGFTEAFRARTQGPGHYSFWDYQAGAWQRNNGIRIDHLLLTPQAADLMTDVQIDR 240

Query: 244 KPRGWTKPSDHTPVIVSL 261
             RG  KPSDH PV + L
Sbjct: 241 DIRGRDKPSDHVPVWIDL 258


>gi|329890230|ref|ZP_08268573.1| exodeoxyribonuclease III [Brevundimonas diminuta ATCC 11568]
 gi|328845531|gb|EGF95095.1| exodeoxyribonuclease III [Brevundimonas diminuta ATCC 11568]
          Length = 261

 Score =  220 bits (560), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 114/260 (43%), Positives = 161/260 (61%), Gaps = 1/260 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+ AR+  +  WI+  NPD+ C QE K  D+ FP E  + L Y++ET GQK
Sbjct: 1   MRIATWNVNSVNARLPTVLEWIQAANPDVACFQEIKCVDEKFPREAFEDLGYNVETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           SYNGVA+LSKY   ++   LPGDD D QAR++EA      + +R+ ++YLP+GNP+ + K
Sbjct: 61  SYNGVALLSKYPLSDVRRGLPGDDGDEQARYLEALIEAP-RPIRVASIYLPNGNPLGTEK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K++W +R    A + L LEEPL   GDYN+IP+  D  NP  W  DA F  E R++F
Sbjct: 120 FAYKLAWFQRLQNHARELLALEEPLALCGDYNVIPEAEDAKNPAAWAEDALFQPESREAF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + L+ +G  D+     +    ++FWDY A +W +N GIRID  +LSP A     +     
Sbjct: 180 RALKWLGLADSHELGREPAGTFTFWDYQAGAWQRNHGIRIDFALLSPHAADRFRAIETHR 239

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
           + R   KPSDH PV+V LD+
Sbjct: 240 EARDMEKPSDHVPVVVDLDL 259


>gi|126739465|ref|ZP_01755158.1| exodeoxyribonuclease III [Roseobacter sp. SK209-2-6]
 gi|126719565|gb|EBA16274.1| exodeoxyribonuclease III [Roseobacter sp. SK209-2-6]
          Length = 268

 Score =  220 bits (559), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 126/269 (46%), Positives = 168/269 (62%), Gaps = 10/269 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A++N+N I+AR   L  W+ E  PD++ LQE K+ D+ FP E  +   Y++ET GQK
Sbjct: 1   MKIASFNINGIKARAAALPQWLDEAQPDVVLLQEIKSVDEAFPRELFEERGYNVETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122
           S+NGVAILSK    +I   LPGDD D QAR+IEAT  +  Q LRI  LYLP+GNP+    
Sbjct: 61  SFNGVAILSKLPLEDIRRGLPGDDSDEQARWIEAT-VVGKQALRICGLYLPNGNPVELEV 119

Query: 123 --------KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
                   KY  K++W++R  + A   L  E P + AGDYNIIPQ  D   P  W  DA 
Sbjct: 120 DGSPVAGGKYAYKLAWMERLHKRAQDLLAEETPALMAGDYNIIPQAEDAKRPEAWREDAL 179

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
              E R ++Q++ N+GFT+A RA H     YSFWDY A +W+++ GIRIDH +LSP+A  
Sbjct: 180 HRPESRAAYQQIVNLGFTEAFRARHQGPGHYSFWDYQAGAWNRDDGIRIDHFLLSPQAAD 239

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           LL   +ID + RG  KPSDH P+ V LD+
Sbjct: 240 LLRDCQIDKEIRGREKPSDHVPIWVDLDL 268


>gi|315498514|ref|YP_004087318.1| exodeoxyribonuclease iii xth [Asticcacaulis excentricus CB 48]
 gi|315416526|gb|ADU13167.1| exodeoxyribonuclease III Xth [Asticcacaulis excentricus CB 48]
          Length = 263

 Score =  220 bits (559), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 113/264 (42%), Positives = 159/264 (60%), Gaps = 5/264 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + T+NVNS+ AR+  +  W +E  PD+  LQE K  D+ FP+E  + L Y+    GQK
Sbjct: 1   MKIFTYNVNSVNARLPLILEWFEETQPDVCALQELKCLDEKFPYEPFERLGYNAAVHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           ++NGVA+LSK   I++V  LPG+  D Q+R+IEA     +  +R+ ++YLP+GNPI + K
Sbjct: 61  TWNGVALLSKQPLIDVVRGLPGEPEDEQSRYIEAVVDG-SVPVRVTSIYLPNGNPIGTDK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K  W KR    A + L  EE  + +GD+N IP   D Y    W +DA +  E R ++
Sbjct: 120 YPYKHRWYKRLQARAKEILAFEEISVLSGDFNTIPTKSDLYRESAWLDDALYQPETRAAY 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q L+N+G++DA        + Y+FWDY A +W KN+GIRIDH +LSP+A   L S  I  
Sbjct: 180 QSLKNLGYSDACDLMPPEGNRYTFWDYQAGAWQKNEGIRIDHHLLSPQAADRLKSFEIHK 239

Query: 244 KPRGWT----KPSDHTPVIVSLDI 263
             RG T    KPSDH PV V LD+
Sbjct: 240 DARGRTHDDAKPSDHVPVGVELDV 263


>gi|255262040|ref|ZP_05341382.1| exodeoxyribonuclease III [Thalassiobium sp. R2A62]
 gi|255104375|gb|EET47049.1| exodeoxyribonuclease III [Thalassiobium sp. R2A62]
          Length = 259

 Score =  220 bits (559), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 122/258 (47%), Positives = 169/258 (65%), Gaps = 1/258 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+N+N I+ARI+ L  W+ E  PD+  LQE K+ D+NFP E  +   Y++E+ GQK
Sbjct: 1   MKIATFNINGIKARINALPDWLDEAQPDVAILQEIKSVDENFPRELFEERGYNVESHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           S+NGVA+LSK    ++   LPGDD D QAR+IEAT  +  Q +R+  LYLP+GNP+   K
Sbjct: 61  SFNGVAMLSKLPLEDVQRGLPGDDEDEQARWIEAT-VVGEQAVRLCGLYLPNGNPVPGPK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y+ K+SW++R L  A   L  E+  +  GD+NIIPQ  D  NP +W  DA F  E R ++
Sbjct: 120 YEYKLSWMERLLTRAKDLLAEEQLALITGDFNIIPQAEDAANPQVWREDALFRPESRAAW 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           +++ N+G+T+A RA       YSFWDY A +W+KN GIRIDH +L+P+   LL   +ID 
Sbjct: 180 RRIVNLGYTEAFRARTHGPGHYSFWDYQAGAWNKNDGIRIDHFLLTPQCADLLRECKIDA 239

Query: 244 KPRGWTKPSDHTPVIVSL 261
           + RG  KPSDH PV V L
Sbjct: 240 EIRGREKPSDHVPVWVEL 257


>gi|239814644|ref|YP_002943554.1| exodeoxyribonuclease III Xth [Variovorax paradoxus S110]
 gi|239801221|gb|ACS18288.1| exodeoxyribonuclease III Xth [Variovorax paradoxus S110]
          Length = 261

 Score =  220 bits (559), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 90/259 (34%), Positives = 135/259 (52%), Gaps = 1/259 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+ AR+ ++  W+  N  D++CLQE K  D  FP + L+S  Y     GQK
Sbjct: 1   MKIATWNVNSLTARLQHVLDWLIANPVDVLCLQELKMSDDKFPLDVLKSAGYEAAVFGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAILS     ++  ++ G   D       AT       LRI N Y  +G    + K
Sbjct: 61  TYNGVAILSLAPMRDVARNIGGFTDDQSRVI-AATVETPAGPLRIVNGYFVNGQAPGTDK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           ++ K+ W++    +    +     L+  GD+NI P+  D ++P+        T E R+ F
Sbjct: 120 FEYKMGWLRALREWLRAEMAAHPNLVLLGDFNIAPEDRDSFDPVGLAETIHHTTEEREHF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + L  +G  D+ R        +S+WDY    + KN+G+RIDHI++S      +    ID 
Sbjct: 180 KALLQLGLVDSFRLFEQPEKSFSWWDYRMLGYQKNRGLRIDHILVSEPLVPRVKGCIIDR 239

Query: 244 KPRGWTKPSDHTPVIVSLD 262
            PR W KPSDH PV++ LD
Sbjct: 240 VPRKWEKPSDHAPVVLDLD 258


>gi|255035926|ref|YP_003086547.1| exodeoxyribonuclease III Xth [Dyadobacter fermentans DSM 18053]
 gi|254948682|gb|ACT93382.1| exodeoxyribonuclease III Xth [Dyadobacter fermentans DSM 18053]
          Length = 260

 Score =  219 bits (558), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 98/262 (37%), Positives = 143/262 (54%), Gaps = 3/262 (1%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           M+ + +AT+NVN +  R+  L  W+ E  PD++CLQE K   + FP + +    Y     
Sbjct: 1   MNAMRIATYNVNGVNGRLPVLLRWLTETTPDVVCLQELKAPQEKFPEQAILEAGYKAIWH 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           GQKS+NGVAILS+     I   +                      L +G LYLP+GNP  
Sbjct: 61  GQKSWNGVAILSRGD---IPAEIRRVLPGDPEDAHSRYIEAEIGGLTVGGLYLPNGNPAP 117

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             K+D K+ W  R +  A   L   +P++  GD+N++P   D Y P  W +DA F  E R
Sbjct: 118 GPKFDYKLRWFDRLITHAQGLLAAGKPVLLTGDFNVMPTELDVYKPESWVDDALFRPETR 177

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            +F KL + G+TDAIR  +    +Y+FWDY+ +++++N G+RIDH +LSP     L +A 
Sbjct: 178 AAFAKLMDQGWTDAIRTLYPDEKIYTFWDYFRNAFARNAGLRIDHFLLSPNLAPRLIAAG 237

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           +D + RGW K SDH PV + L 
Sbjct: 238 VDKQVRGWEKTSDHAPVWIELK 259


>gi|317969204|ref|ZP_07970594.1| exodeoxyribonuclease III [Synechococcus sp. CB0205]
          Length = 273

 Score =  219 bits (557), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 89/271 (32%), Positives = 140/271 (51%), Gaps = 1/271 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A+WNVNS+R R+  + AW++ + PD++CLQETK  D  FP +  + + YH    GQK
Sbjct: 1   MRIASWNVNSVRTRLDQVLAWLQTHEPDVLCLQETKVSDDLFPLQAFEQIGYHCAISGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQA-RFIEATFTINTQTLRIGNLYLPHGNPITST 122
           +YNGVA++S+    ++         D       +   +     +RI NLY+P+G+ + S 
Sbjct: 61  AYNGVALISREPLEDVQVGFDALLPDAGPLSEQKRVISGMLDGVRILNLYVPNGSSLKSE 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           KY  K+ W+    R+ + + E  +PL   GD+NI  +  D  +P         +   R +
Sbjct: 121 KYHYKLEWLACLQRYLAVQEEQGDPLCMVGDFNIGLEDRDLPDPQRLSGTIMASDPERSA 180

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
            +       TD  R        +S+WDY + +W ++ G RIDHI LS E         ID
Sbjct: 181 LRAALADRLTDVFRVFEPGSGHWSWWDYRSGAWDRDLGWRIDHIYLSEELLGCATGCVID 240

Query: 243 TKPRGWTKPSDHTPVIVSLDIPEPRKKQQDS 273
            +PRG  +PSDH PV+V+L  P    + +DS
Sbjct: 241 KQPRGNVQPSDHAPVVVNLAWPPEEDEDEDS 271


>gi|119383680|ref|YP_914736.1| exodeoxyribonuclease III Xth [Paracoccus denitrificans PD1222]
 gi|119373447|gb|ABL69040.1| Exodeoxyribonuclease III [Paracoccus denitrificans PD1222]
          Length = 261

 Score =  219 bits (557), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 118/261 (45%), Positives = 162/261 (62%), Gaps = 3/261 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+N+N +RARI  L  W+ E  PD++ LQE K +D+ FP E +  L Y+IET GQK
Sbjct: 1   MKIATFNINGVRARIETLTGWLSEAQPDVVVLQEIKAQDEGFPREPIADLGYNIETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVAILSK    ++   LPGD+ D QAR+IEAT  +  + +RI  LYLP+GNP    K
Sbjct: 61  GFNGVAILSKLPLEDVSRGLPGDETDEQARYIEAT-VVGHRAVRIAGLYLPNGNPQPGPK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +D K++W++R    A   L  E P+   GDYN+IP+  D   P  W +DA F  E R + 
Sbjct: 120 FDYKLAWMERLRARAKALLATEMPVAMMGDYNVIPESRDAAFPEKWLDDALFQPESRAAL 179

Query: 184 QKLQNMGFTDAIRATHD--THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           +++   G+ DA+R  H   T   ++FWDY A +W ++ GIRIDH++LSP+A  LL    I
Sbjct: 180 RRILFDGWADAVRLRHPGSTRGPFTFWDYQAGAWQRDNGIRIDHVLLSPQAADLLIDVGI 239

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
           D   R   KPSDH PV V LD
Sbjct: 240 DRDERAKDKPSDHVPVWVDLD 260


>gi|84684871|ref|ZP_01012771.1| exodeoxyribonuclease III [Maritimibacter alkaliphilus HTCC2654]
 gi|84667206|gb|EAQ13676.1| exodeoxyribonuclease III [Rhodobacterales bacterium HTCC2654]
          Length = 267

 Score =  219 bits (557), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 115/265 (43%), Positives = 167/265 (63%), Gaps = 7/265 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A++N+N I+AR+  +  W+ E  PD++  QE K+ D+NFP E  + + Y++ET GQK
Sbjct: 1   MKIASYNINGIKARLPAVTDWLTEAQPDVVIFQEIKSVDENFPREHFEDMGYNVETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDD-------LDVQARFIEATFTINTQTLRIGNLYLPHG 116
           S+NGVAILSK    ++   LPG +        D QAR+IEAT   +   +RI  LYLP+G
Sbjct: 61  SFNGVAILSKRPLEDVTRGLPGAEGTGRDGEDDEQARYIEATVLGDRNAVRICGLYLPNG 120

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
           NP+   K+  K+ W++R  + A + L LE+P + AGDYN+IPQ  D  +P  W +DA F 
Sbjct: 121 NPVGDEKFAYKLRWMERLEKRAKELLALEQPFLMAGDYNVIPQGIDALHPENWRDDALFQ 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
            E R +F +LQN+G T+A RA +     ++FWD+   +W +N GIRIDH +LSP+   LL
Sbjct: 181 PESRGAFWRLQNLGLTEAFRARNQAAEQFTFWDFQRGAWQRNDGIRIDHFLLSPQCADLL 240

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSL 261
              +ID + RG  KPSDH P+ V L
Sbjct: 241 EDCQIDKEVRGRDKPSDHVPIWVEL 265


>gi|222148978|ref|YP_002549935.1| exonuclease III [Agrobacterium vitis S4]
 gi|221735964|gb|ACM36927.1| exonuclease III [Agrobacterium vitis S4]
          Length = 264

 Score =  219 bits (557), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 139/256 (54%), Positives = 183/256 (71%), Gaps = 1/256 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+N ++AR+ NL  W++ ++PDI+CLQE K+ D+ FP   +++L YH+ET GQK
Sbjct: 1   MKIATWNINGVKARLANLCQWLESSSPDIVCLQEIKSVDEGFPRAEIEALGYHVETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP-ITST 122
            +NGVA+LSK +P E+   LPGD+ D QARFIE  F++    LR+ +LYLP+GNP     
Sbjct: 61  GFNGVALLSKIRPDEVNRGLPGDEADEQARFIEGVFSVADGVLRVCSLYLPNGNPSDDPV 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           KY  K++W+ R  RFA+ RL LEEPLI AGDYN+IP PHDC++P +W  DA F  + R +
Sbjct: 121 KYPYKLAWMARLQRFAADRLALEEPLILAGDYNVIPHPHDCFDPAVWATDALFLPQTRAA 180

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           FQ L+N+G TDA+RAT D   LYSFWDY A +W KN GIRIDH++LS EAT  L S  I+
Sbjct: 181 FQALENLGLTDAVRATTDATKLYSFWDYQAGAWQKNNGIRIDHLLLSAEATDRLVSTEIE 240

Query: 243 TKPRGWTKPSDHTPVI 258
              R W KPSDH PVI
Sbjct: 241 KHVRSWEKPSDHVPVI 256


>gi|257092446|ref|YP_003166087.1| exodeoxyribonuclease III Xth [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
 gi|257044970|gb|ACV34158.1| exodeoxyribonuclease III Xth [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
          Length = 255

 Score =  218 bits (556), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 91/258 (35%), Positives = 137/258 (53%), Gaps = 5/258 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A+WNVNS++ R+  L  W+    PDI+CLQETK ED  FP + +++  YH+   GQK
Sbjct: 1   MKIASWNVNSLKVRLPQLLDWLAAEQPDIVCLQETKLEDHAFPQQEVEAAGYHVAFSGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVA+L++  P ++V   P      +         I      +   Y+P+G  + S K
Sbjct: 61  TYNGVALLARESPSDVVCGNPLHADQQKRLVAATIGGIC-----VVCAYVPNGQAVGSDK 115

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K++W+    R+   RL     L+ AGD+NI P+  D YNP  W      +   R +F
Sbjct: 116 YAYKLAWLDALTRWLKGRLAANPRLVVAGDFNIAPEDRDVYNPAAWAGQILCSAPERAAF 175

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q+L ++G  D+ R        +S+WDY    + KN+G+RIDHI+LS     +   A I+ 
Sbjct: 176 QRLLDLGLKDSFRLFEQPEKSFSWWDYRMLGFQKNQGLRIDHILLSEPLAGICTVAGINR 235

Query: 244 KPRGWTKPSDHTPVIVSL 261
             R   +PSDH PV   L
Sbjct: 236 HMRKLERPSDHAPVTAEL 253


>gi|108759762|ref|YP_633331.1| exodeoxyribonuclease III [Myxococcus xanthus DK 1622]
 gi|108463642|gb|ABF88827.1| exodeoxyribonuclease III [Myxococcus xanthus DK 1622]
          Length = 256

 Score =  218 bits (556), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 102/258 (39%), Positives = 149/258 (57%), Gaps = 4/258 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+RAR   L AW+K+  PD++CLQE K  D +FP E ++ L YH    GQK
Sbjct: 1   MKIATWNVNSVRARQERLLAWLKKAQPDVLCLQELKCVDDDFPMEAVRELGYHAAVHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAIL+K +P ++V  L     D  AR I AT       +R+ + Y P+G  + S +
Sbjct: 61  TYNGVAILAKEEPKDVVKGLSDGVDDSHARLIAATVGG----IRVVSAYAPNGQSVDSPQ 116

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W  R  R+   R + +EPL+  GD+N+ P+  D Y+P +WE    FTL+ R + 
Sbjct: 117 YQYKLEWYGRLRRYLDTRHKPDEPLVLGGDWNVAPEDIDTYDPKLWEGQTLFTLKERDAL 176

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q+L   G +DA R  H     +++WDY    + KN G+RIDH+ ++      L    +D 
Sbjct: 177 QRLGAFGLSDAFRRLHPGVQKFTWWDYRMLGFPKNLGLRIDHLYVTAPVAERLTVVDVDR 236

Query: 244 KPRGWTKPSDHTPVIVSL 261
           + R   +PSDH PV + L
Sbjct: 237 EERKGKQPSDHAPVWLEL 254


>gi|292490590|ref|YP_003526029.1| exodeoxyribonuclease III Xth [Nitrosococcus halophilus Nc4]
 gi|291579185|gb|ADE13642.1| exodeoxyribonuclease III Xth [Nitrosococcus halophilus Nc4]
          Length = 257

 Score =  218 bits (556), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 92/261 (35%), Positives = 142/261 (54%), Gaps = 5/261 (1%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           M  + +ATWNVNS+R R+  +  W++ + PDI+ LQETK  D  FP E    + Y     
Sbjct: 1   MPKLKIATWNVNSLRVRLPQVMDWLEAHQPDILALQETKLSDGEFPQEAFGDMGYRAAYS 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           GQK+YNGVAIL + +P +I+T LP  +   +         I+   +R+ NLY+P+G+ + 
Sbjct: 61  GQKTYNGVAILCRQEPQDIMTDLPNLEDPQRRIL-----GISLGDIRLLNLYVPNGSEVG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
           S KY  K+ W+ R   +  + L     LI  GD+N+ P   D +NP IW      +   R
Sbjct: 116 SEKYAYKLDWLARVKDYLQEALAEYPKLIVLGDFNVAPGDGDVHNPEIWHETILCSTPER 175

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           ++  ++ ++GF D+ R        +S+WDY   ++ +N G+RID I++S E         
Sbjct: 176 EALGEILDLGFQDSFRLFEQEGQSFSWWDYRGGAFRRNWGLRIDLILISKELVPKCTECV 235

Query: 241 IDTKPRGWTKPSDHTPVIVSL 261
           ID +PR   +PSDH PVI + 
Sbjct: 236 IDKEPRRLKRPSDHAPVIATF 256


>gi|220923190|ref|YP_002498492.1| exodeoxyribonuclease III Xth [Methylobacterium nodulans ORS 2060]
 gi|219947797|gb|ACL58189.1| exodeoxyribonuclease III Xth [Methylobacterium nodulans ORS 2060]
          Length = 263

 Score =  218 bits (556), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 126/262 (48%), Positives = 174/262 (66%), Gaps = 2/262 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + TWNVNS++ R+ +L A++KE +PD++CLQE K  D+ FP   ++   Y + T GQK
Sbjct: 1   MRITTWNVNSVKQRLGHLLAFLKEASPDVVCLQELKCVDEAFPRTEIEEAGYVVATHGQK 60

Query: 64  SYNGVAILSKYQP--IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           ++NGVA+L++      ++   LPGD  D QAR+IEA     T TLR+ ++YLP+GNPI +
Sbjct: 61  AFNGVALLTRQPLPLRDVRRGLPGDPEDGQARYIEAVIPTATATLRVASIYLPNGNPIGT 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            KYD K+++++R L  A    E EE L+ AGDYN+IP+P D  NP  W  DA F  E R 
Sbjct: 121 PKYDYKLAFLRRLLLHARALREKEEVLVLAGDYNVIPEPIDVANPEAWTGDALFLPESRA 180

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           +F+ L N GFTDA+RA  +   LY+FWDY A +WS+N GIRIDH++LSP+A   L SA +
Sbjct: 181 AFRMLLNEGFTDALRACDERPGLYTFWDYQAGAWSRNLGIRIDHLLLSPQALDRLVSASV 240

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
               RG  KPSDH PV V LD+
Sbjct: 241 QKHLRGLDKPSDHVPVTVELDL 262


>gi|123968077|ref|YP_001008935.1| exodeoxyribonuclease III [Prochlorococcus marinus str. AS9601]
 gi|123198187|gb|ABM69828.1| exodeoxyribonuclease III [Prochlorococcus marinus str. AS9601]
          Length = 281

 Score =  218 bits (556), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 97/266 (36%), Positives = 148/266 (55%), Gaps = 4/266 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSIR R+  +  WI ++NPDI+CLQETK  D NFP E  + L Y +E  GQK
Sbjct: 1   MLIATWNVNSIRTRLSQILDWINKSNPDILCLQETKVVDDNFPIEAFEKLGYSVEIYGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT----INTQTLRIGNLYLPHGNPI 119
           SYNGVAI+SK +P  +     G +   Q   I          +   ++I N+Y+P+G+ +
Sbjct: 61  SYNGVAIISKIKPENVKKGFYGCNDTNQNIEIFLDQKRLISADINGIKIINVYVPNGSSL 120

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
            S+K++ KI+W+     F   + +    +   GD+N+ P   D ++P  +E     +   
Sbjct: 121 DSSKFEYKINWLNCLASFLDDQEKKGALICLMGDFNVAPSNLDIHDPKKYEGGIMASEIE 180

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R +   +      D+ R        +S+WDY  +++  NKG RIDHI +S E +S L S 
Sbjct: 181 RSALNNVLKKRLIDSFRIYEQNTGHWSWWDYRNNAFELNKGWRIDHIYISKELSSKLKSC 240

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPE 265
            ID+ PRG  +PSDH PV++ L++ E
Sbjct: 241 VIDSCPRGNLRPSDHAPVMIDLNLNE 266


>gi|114771793|ref|ZP_01449186.1| exodeoxyribonuclease III [alpha proteobacterium HTCC2255]
 gi|114547609|gb|EAU50500.1| exodeoxyribonuclease III [alpha proteobacterium HTCC2255]
          Length = 260

 Score =  218 bits (556), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 122/260 (46%), Positives = 168/260 (64%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+N+N I+AR+  L  W+ E  PDI  LQE K+ D+ FP E +++L Y I + G K
Sbjct: 1   MKIATFNINGIKARLPALLDWLSETMPDIAMLQEIKSVDELFPREEIEALGYQIHSHGMK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVAILSKY   +I+  LPGD  D+Q R+IEAT   N   LR+ NLYLP+GNP    K
Sbjct: 61  GFNGVAILSKYPLEDIMRGLPGDSDDIQTRYIEATVITNKGPLRLCNLYLPNGNPTPGPK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +D K+ W+KR        ++LEEP + AGD+NIIPQ  DC++  +WE+DA +  E R ++
Sbjct: 121 FDYKLKWMKRLYERTCALIKLEEPFLLAGDFNIIPQAEDCWDTKVWESDAAYLPESRAAY 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           +K+ N+G TDA R  + +   Y+FWDY A +W+KN GIRIDH +LS     +L   + D 
Sbjct: 181 RKILNLGLTDAFRVKNKSAMNYTFWDYQAGAWNKNNGIRIDHFLLSSSCADILIDCQSDR 240

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
           + R   KPSDH PV V LDI
Sbjct: 241 ECRARDKPSDHVPVWVELDI 260


>gi|302383762|ref|YP_003819585.1| exodeoxyribonuclease III Xth [Brevundimonas subvibrioides ATCC
           15264]
 gi|302194390|gb|ADL01962.1| exodeoxyribonuclease III Xth [Brevundimonas subvibrioides ATCC
           15264]
          Length = 264

 Score =  218 bits (555), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 107/262 (40%), Positives = 148/262 (56%), Gaps = 4/262 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+ AR+  +  W++   PD++C QE KT D  FP E  +SL Y++E  GQK
Sbjct: 1   MRIATWNVNSVNARLPTVLQWLEAAVPDVVCFQEIKTVDDKFPREAFESLGYNVEVHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN----TQTLRIGNLYLPHGNPI 119
           SYNGVA+LSKY   ++   LPG DL  +    +A +        + +R+G LYLP+GNPI
Sbjct: 61  SYNGVALLSKYPVSDVRRGLPGSDLLAEGEDDQARYIEALIEAPRPIRVGGLYLPNGNPI 120

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
            + K+D K+ W+ R    A   L  EE     GDYN+IP P D   P  W  DA F  E 
Sbjct: 121 GTGKFDYKLRWMGRLNAHARDLLANEEAFTLCGDYNVIPTPDDAKTPSAWVTDALFQPES 180

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R +F+ L+ +G  +A    +     Y+FWDY A +W ++ GIRID  +LSP+A       
Sbjct: 181 RAAFRALKGLGLYEAGELGNQPPGTYTFWDYQAGAWQRDHGIRIDFHLLSPQAADRFVGV 240

Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261
                 R   KPSDH PV++ L
Sbjct: 241 ETHRDARDMDKPSDHVPVVIEL 262


>gi|89068210|ref|ZP_01155620.1| exodeoxyribonuclease III [Oceanicola granulosus HTCC2516]
 gi|89046127|gb|EAR52185.1| exodeoxyribonuclease III [Oceanicola granulosus HTCC2516]
          Length = 264

 Score =  218 bits (555), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 123/260 (47%), Positives = 170/260 (65%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
             + +AT+N+N I+AR  +L AW+ E +PD++ LQE K+ D+NFP E  +   Y++ T G
Sbjct: 3   RSMKIATFNINGIKARHQSLLAWLDEADPDVVLLQEIKSIDENFPSELFEEKGYNVATHG 62

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           QK +NGVAILSK    ++   LPGDD D  AR+IEAT       +R+  LYLP+GNP   
Sbjct: 63  QKGFNGVAILSKLPLEDVSRGLPGDDTDEHARWIEATVVGEHAAIRLCGLYLPNGNPAPG 122

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            KYD K++W++R    A++ +E EEP I AGDYN+IPQP D   P  W  DA F  + R+
Sbjct: 123 PKYDYKLAWMERLHARAAELMEAEEPAIMAGDYNVIPQPEDAARPKAWVKDALFLPQTRR 182

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           ++++L N+GFT+A RA       YSFWDY A +W KN GIRIDH++++P+A  L+    I
Sbjct: 183 AWRRLLNLGFTEAFRAKTLAAGHYSFWDYQAGAWQKNDGIRIDHVLMTPQAADLMRDVWI 242

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
           D+  RG  KPSDH PV+V L
Sbjct: 243 DSAVRGRDKPSDHVPVVVDL 262


>gi|29828508|ref|NP_823142.1| exonuclease [Streptomyces avermitilis MA-4680]
 gi|29605612|dbj|BAC69677.1| putative exonuclease [Streptomyces avermitilis MA-4680]
          Length = 262

 Score =  218 bits (555), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 78/262 (29%), Positives = 128/262 (48%), Gaps = 1/262 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSI AR+  L AW++ +  D++C+QETKT  + FP + L+ L Y        
Sbjct: 1   MRIATWNVNSITARLPRLLAWLESSGTDVLCIQETKTTAEQFPADALRELGYESAVHATG 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVA++S+    ++V  LPGD      +   A        +R+ ++Y+P+G  +    
Sbjct: 61  RWNGVAVISRVGLEDVVRGLPGDPGFDGVQEPRALSATCGP-VRVWSVYVPNGREVEHPH 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W +      +       P    GD+N+ P   D Y+   +E     T   R + 
Sbjct: 120 YAYKLQWFEALKAAVAGDAAGSRPFAVMGDFNVAPTDDDVYDVAAFEGLTHVTPAERAAL 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             L+  G +D +       H Y++WDY    + KN+G+RID +  +      +  A +D 
Sbjct: 180 ATLREAGLSDVVPRPLKYEHPYTYWDYRQLCFPKNRGMRIDLVYGNEPFAKAVKDAYVDR 239

Query: 244 KPRGWTKPSDHTPVIVSLDIPE 265
           + R     SDH PV+V LD+ +
Sbjct: 240 EERKGKGASDHAPVVVDLDVQD 261


>gi|296135895|ref|YP_003643137.1| exodeoxyribonuclease III Xth [Thiomonas intermedia K12]
 gi|295796017|gb|ADG30807.1| exodeoxyribonuclease III Xth [Thiomonas intermedia K12]
          Length = 253

 Score =  218 bits (555), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 88/256 (34%), Positives = 132/256 (51%), Gaps = 5/256 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+  R+  +  W++  +PD++ LQETK  D+ FP   L +  YH    GQ 
Sbjct: 1   MKIATWNVNSLSVRLPQVLDWLQAQSPDVLALQETKLTDERFPHAELLNAGYHSVCLGQP 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVA+LS+ +  E+   +PG +                  LR+   Y P+G    S K
Sbjct: 61  TYNGVALLSRREAAEVQRGIPGFEDAQARVIAATFGD-----LRVIGAYFPNGQAPDSDK 115

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W+     + +  L+    +   GD+NI P+  D ++P+ W      T E R  F
Sbjct: 116 FAYKMRWLDALQAWVATELQRHAKVALMGDFNIAPEDRDVFDPVAWAGQIHCTPEERGHF 175

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + L  +G  DA RA       +S+WDY   ++ KN+G+RIDHI++S      L S  ID 
Sbjct: 176 KALLGLGLIDAFRAFDQPPKSWSWWDYRNLAFRKNQGLRIDHILVSEGLRGSLQSCVIDK 235

Query: 244 KPRGWTKPSDHTPVIV 259
            PR   +PSDH PVI 
Sbjct: 236 APRKNERPSDHAPVIA 251


>gi|148550719|ref|YP_001260158.1| exodeoxyribonuclease III Xth [Sphingomonas wittichii RW1]
 gi|148503138|gb|ABQ71391.1| exodeoxyribonuclease III Xth [Sphingomonas wittichii RW1]
          Length = 269

 Score =  218 bits (555), Expect = 7e-55,   Method: Composition-based stats.
 Identities = 99/271 (36%), Positives = 150/271 (55%), Gaps = 4/271 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+NVN +  R+  L  W++E  PD++ LQE K   + FP   ++ L Y +   GQK
Sbjct: 1   MKIATYNVNGVNGRLPVLLRWLEEAQPDVVVLQELKAPQEKFPESAIRDLGYDVIWHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           S+NGVA+LS+   I                            + IG LYLP+GNP    K
Sbjct: 61  SWNGVALLSRVGEIHETRRGL---PGDPDPGQSRYIEAAVNGILIGGLYLPNGNPRPGPK 117

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +D K+ W  R +  A+  LE   P++ AGD+N++P   D Y P  W +DA F  EVR ++
Sbjct: 118 FDYKLRWFDRLIEHAAGLLESGLPVMLAGDFNVMPTDLDVYKPERWLDDALFAPEVRAAY 177

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            +L + G+TDA+R  H    +Y+FWDY+ +++ +N G+RIDH++LSP     L  A++D 
Sbjct: 178 FRLLDQGWTDALRTLHPGEVIYTFWDYFRNAYGRNAGLRIDHLLLSPALADRLLDAQVDR 237

Query: 244 KPRGWTKPSDHTPVIVSLDIPEPRKKQQDST 274
             RGW K SDH PV + L   +P++K+    
Sbjct: 238 HVRGWEKTSDHAPVWIELA-DKPKRKRAPKA 267


>gi|86138642|ref|ZP_01057215.1| exodeoxyribonuclease III [Roseobacter sp. MED193]
 gi|85824702|gb|EAQ44904.1| exodeoxyribonuclease III [Roseobacter sp. MED193]
          Length = 268

 Score =  218 bits (555), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 125/269 (46%), Positives = 168/269 (62%), Gaps = 10/269 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A++N+N I+AR   L  W+ E  PD++ LQE K+ D+ FP E  +   Y++ET GQK
Sbjct: 1   MKIASFNINGIKARAAALPQWLDEAKPDVVVLQEIKSIDEAFPRELFEERGYNVETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI---- 119
            +NGVAILSK    ++   LPGD+ D+QAR+IEAT  I  Q LRI  LYLP+GNP+    
Sbjct: 61  GFNGVAILSKLPLEDVSRGLPGDEDDLQARWIEAT-VIGKQALRICGLYLPNGNPVELTD 119

Query: 120 -----TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
                   KY  K++W++R    A   LE E P + AGDYNIIPQ  D   P  W  DA 
Sbjct: 120 EGSPVPGGKYAYKLAWMERLHARAQDLLESEMPALMAGDYNIIPQAEDAKRPEAWREDAL 179

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
              E R ++Q++ N+GFT+A RA H     YSFWDY A +W+++ GIRIDH +LSP+A  
Sbjct: 180 HRPESRAAYQRIVNLGFTEAFRARHQGPGHYSFWDYQAGAWNRDDGIRIDHFLLSPQAAD 239

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           LL   +ID + RG  KPSDH P+ V LD+
Sbjct: 240 LLQDCQIDKEIRGRDKPSDHVPIWVDLDL 268


>gi|99080738|ref|YP_612892.1| exodeoxyribonuclease III [Ruegeria sp. TM1040]
 gi|99037018|gb|ABF63630.1| Exodeoxyribonuclease III [Ruegeria sp. TM1040]
          Length = 268

 Score =  218 bits (555), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 119/269 (44%), Positives = 165/269 (61%), Gaps = 10/269 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A++N+N I+AR++ L  W+ E  PD+  LQE K+ D+ FP E  +   Y++ET GQK
Sbjct: 1   MKIASFNINGIKARVNALTDWLDEAQPDVAVLQEIKSVDEAFPRELFEERGYNVETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           S+NGVAILSK    ++   LPGD+ D QAR+IEAT  +  Q LRI  LYLP+GNP+    
Sbjct: 61  SFNGVAILSKLPLEDVRRGLPGDESDEQARWIEAT-VVGKQALRICGLYLPNGNPVELND 119

Query: 124 ---------YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
                    Y  K+ W++R    A++ +  E P + AGDYNIIPQ  D   P  W  DA 
Sbjct: 120 DGTPVEGGKYAYKLGWMERLKARAAELMAEEMPALMAGDYNIIPQAEDAKRPEAWREDAL 179

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
              E R +FQ++ N+GFT+A R        Y+FWDY A +W+++ GIRIDH +L+P+A  
Sbjct: 180 HRPESRAAFQRIVNLGFTEAFRTRTRGPGHYTFWDYQAGAWNRDDGIRIDHFLLTPQAAD 239

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           LL   +ID   RG  KPSDH P+ V LD+
Sbjct: 240 LLRDCQIDKDIRGREKPSDHVPIWVDLDL 268


>gi|294340117|emb|CAZ88488.1| putative exodeoxyribonuclease III [Thiomonas sp. 3As]
          Length = 253

 Score =  218 bits (554), Expect = 8e-55,   Method: Composition-based stats.
 Identities = 88/256 (34%), Positives = 131/256 (51%), Gaps = 5/256 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+  R+  +  W++  +PD++ LQETK  D  FP   L +  YH    GQ 
Sbjct: 1   MKIATWNVNSLSVRLPQVLDWLQAQSPDVLALQETKLTDDRFPHAELLNAGYHSVCLGQP 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVA+LS+ +  E+   +PG +                  LR+   Y P+G    S K
Sbjct: 61  TYNGVALLSRREAAEVQRGIPGFEDAQARVIAATFGD-----LRVIGAYFPNGQAPDSDK 115

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W+     + +  L+    +   GD+NI P+  D ++P+ W      T E R  F
Sbjct: 116 FAYKMRWLDALQAWVAAELQRYAKVALMGDFNIAPEDRDVFDPVAWAGQIHCTPEERGHF 175

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + L  +G  DA RA       +S+WDY   ++ KN+G+RIDHI++S      L S  ID 
Sbjct: 176 KALLGLGLIDAFRAFDQPPKSWSWWDYRNLAFRKNQGLRIDHILVSEGLRDSLQSCVIDK 235

Query: 244 KPRGWTKPSDHTPVIV 259
            PR   +PSDH PVI 
Sbjct: 236 APRKNERPSDHAPVIA 251


>gi|300022777|ref|YP_003755388.1| exodeoxyribonuclease III [Hyphomicrobium denitrificans ATCC 51888]
 gi|299524598|gb|ADJ23067.1| exodeoxyribonuclease III [Hyphomicrobium denitrificans ATCC 51888]
          Length = 260

 Score =  218 bits (554), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 117/258 (45%), Positives = 167/258 (64%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+N ++AR+ +   ++++ +PD+IC QE K+ D  FP    Q + Y++ T GQK
Sbjct: 1   MILATWNINGVKARLESALTYLRQQSPDVICFQEIKSVDDGFPTSAFQDIGYNVATNGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVAILSK    ++V  LPGDD D  AR+IEA+  +  + +R+ +LYLP+GNPI + K
Sbjct: 61  GFNGVAILSKSPLEDVVRGLPGDDADQHARWIEASVPLGDRMVRVVSLYLPNGNPIGTEK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K++W+ R    A Q  + E PL+ AGD+N+IP+  D   P  W NDA F  E R ++
Sbjct: 121 FSYKLAWMARMRLRAKQLQQDEMPLVLAGDFNVIPESVDAKRPAAWVNDALFQPESRAAW 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + L N GFTDA RA H    +Y+FWDY A ++ K+ GIRIDHI+LS +A  LL ++ ID 
Sbjct: 181 RTLVNEGFTDATRACHPGPGVYTFWDYQAGAFQKDDGIRIDHILLSSQAADLLVASGIDR 240

Query: 244 KPRGWTKPSDHTPVIVSL 261
             R   KPSDH PV V L
Sbjct: 241 ATRAQEKPSDHVPVWVKL 258


>gi|296446338|ref|ZP_06888283.1| exodeoxyribonuclease III Xth [Methylosinus trichosporium OB3b]
 gi|296256111|gb|EFH03193.1| exodeoxyribonuclease III Xth [Methylosinus trichosporium OB3b]
          Length = 258

 Score =  218 bits (554), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 124/259 (47%), Positives = 174/259 (67%), Gaps = 1/259 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+R R+  L A+++E  PD++CLQE K ED  FP   ++ L Y++ET GQK
Sbjct: 1   MRIATWNVNSVRQRLEQLTAYLREVAPDVLCLQEIKCEDAAFPRLEIEELGYNVETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           ++NGVAILSK   IE+V  LP  + D QAR+IEA  + +   LR+ ++YLP+GNP  + K
Sbjct: 61  TFNGVAILSKTP-IEVVRGLPKFEHDPQARYIEAVVSTDRGALRVASIYLPNGNPPETEK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K++++   +  A+  L LEEP++ AGDYN+IP   D ++P  W  DA F  + R  F
Sbjct: 120 YAYKLAFMDCLIAHAASLLALEEPVVLAGDYNVIPAARDVHDPAAWAGDALFLPQTRAKF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q+L N+G+T+A+RAT D   LY+FWDY A +W +NKGIRIDH++LSP+A   L S  ID 
Sbjct: 180 QELTNLGYTEALRATTDAAGLYTFWDYQAGAWQRNKGIRIDHLLLSPQAADRLQSVTIDK 239

Query: 244 KPRGWTKPSDHTPVIVSLD 262
             R   KPSDH P+   L+
Sbjct: 240 NLRAGAKPSDHVPIRCELE 258


>gi|319948313|ref|ZP_08022460.1| exodeoxyribonuclease III [Dietzia cinnamea P4]
 gi|319438033|gb|EFV93006.1| exodeoxyribonuclease III [Dietzia cinnamea P4]
          Length = 266

 Score =  218 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 77/266 (28%), Positives = 128/266 (48%), Gaps = 7/266 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSIRAR   + AW+  ++ D++ +QETK +D+ FP E  + L Y +   G  
Sbjct: 1   MRLATWNVNSIRARKDRVLAWLDRSDVDVLAMQETKCKDEQFPEEDFRELGYEVAHHGLS 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-----TQTLRIGNLYLPHGNP 118
            +NGVA+ S+    ++     G     +                   +R+ +LY+P+G  
Sbjct: 61  QWNGVAVASRVGLEDVRLGFDGMPGFHKDPEQSQDPEARAISAVCDGVRVYSLYVPNGRE 120

Query: 119 ITSTKYDDKISWIKRFLRFASQRL--ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
           ++   Y  K+ W+ R    A+  L  + +  +   GD+N+ P   D ++  ++E     +
Sbjct: 121 LSDPHYTYKLEWLARLRDHAAAELVADPDAQVALVGDWNVAPLDEDVWDMEVFEGKTHVS 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
              R +       GF +  R       +Y++WDY   S+ K KG+RID  + SP   + +
Sbjct: 181 GPERLAVAAFDGAGFREVTREYTPGPGVYTYWDYTGLSFPKRKGMRIDFQLHSPALAARV 240

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLD 262
             A ID + R     SDH PV+V LD
Sbjct: 241 TGAFIDREERKGKGASDHAPVVVELD 266


>gi|238063778|ref|ZP_04608487.1| exodeoxyribonuclease III Xth [Micromonospora sp. ATCC 39149]
 gi|237885589|gb|EEP74417.1| exodeoxyribonuclease III Xth [Micromonospora sp. ATCC 39149]
          Length = 271

 Score =  217 bits (553), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 80/260 (30%), Positives = 129/260 (49%), Gaps = 2/260 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS++AR+  L  W+    PD++CLQETK  D  FP   +  L Y + +    
Sbjct: 7   MRLATWNVNSVKARLPRLLDWLATTGPDVVCLQETKCPDGAFPVAEVGELGYTVASHSDG 66

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVAILS+    ++    PG+    +      + T     LR+ ++Y+P+G       
Sbjct: 67  RWNGVAILSRAGLADVTVGFPGEPGFPEPEARAISATCAG--LRVWSVYVPNGRAPGDPH 124

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K++W         Q L    PL   GD+N+ P   D ++P ++      T   R + 
Sbjct: 125 YAYKLAWFAALRDALEQELTGGLPLAVCGDFNVAPTDADVWDPALFATSTHVTPAERDAL 184

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             L+++  +D +       H Y++WDY A  + +NKG+RID +  S      + +A +D 
Sbjct: 185 AALRDLELSDVVPTPMKGPHPYTYWDYRAGMFHQNKGMRIDLVYASAPFARAVRAAYVDR 244

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
           + R    PSDH PV+V  D+
Sbjct: 245 EARKGKAPSDHAPVVVDADL 264


>gi|115375620|ref|ZP_01462877.1| exodeoxyribonuclease III [Stigmatella aurantiaca DW4/3-1]
 gi|115367396|gb|EAU66374.1| exodeoxyribonuclease III [Stigmatella aurantiaca DW4/3-1]
          Length = 263

 Score =  217 bits (553), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 103/259 (39%), Positives = 146/259 (56%), Gaps = 5/259 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A+WNVNS+RAR   L  W+K + PD++CLQE K  D +FP E ++   YH  T GQK
Sbjct: 7   MKIASWNVNSVRARQERLLNWLKAHQPDVLCLQELKCVDADFPTEAVREAGYHAVTHGQK 66

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAILSK +P ++V  L     D  AR I AT +     +R+ + Y+P+G  + S  
Sbjct: 67  TYNGVAILSKAEPSDVVLGLSDGVEDSHARLIAATVSG----VRVVSAYVPNGQAVDSPA 122

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W  R  R+   R   ++PL+  GD+N+ P+P D Y+P +WE    FTL+ R + 
Sbjct: 123 YVYKLEWYSRLRRYLEARHTPDQPLVLCGDWNVAPEPIDVYDPAVWEGQTLFTLKERDAL 182

Query: 184 QKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           Q++   G  D  R  H      +S+WDY   S+ KN G+RIDHI  +      L  A ID
Sbjct: 183 QQVCAFGLADTFRKLHPGVEKKFSWWDYRGLSFPKNLGVRIDHIFATAPLVQRLVKAEID 242

Query: 243 TKPRGWTKPSDHTPVIVSL 261
            + R   +PSDH PV    
Sbjct: 243 REERKGKQPSDHAPVWAEF 261


>gi|325293099|ref|YP_004278963.1| exodeoxyribonuclease III [Agrobacterium sp. H13-3]
 gi|325060952|gb|ADY64643.1| exodeoxyribonuclease III [Agrobacterium sp. H13-3]
          Length = 265

 Score =  217 bits (553), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 141/255 (55%), Positives = 184/255 (72%), Gaps = 1/255 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+N ++ARI NL  W+K+++PDI+CLQE K+ D+ FP   L++L YH+ET GQK
Sbjct: 1   MKIATWNINGVKARIENLCQWLKDSSPDIVCLQEIKSVDEGFPRLELEALGYHVETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122
            +NGVA+LSK +P EI   LPGDD D QARFIE  F+++   +R+ +LYLP+GNP     
Sbjct: 61  GFNGVALLSKMKPDEINHGLPGDDADEQARFIEGVFSVDGGAIRVCSLYLPNGNPPDDPV 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           KY  K++W++R  RFA  RL LEEPLI AGDYN+IP+P DC++P +W  DA F  + R +
Sbjct: 121 KYPYKLAWMERLRRFAEDRLALEEPLILAGDYNVIPEPFDCHDPRVWAGDALFLPKTRSA 180

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F++L+N+GFTDA RAT D   LYSFWDY A +W KN GIRIDH+MLS EA   L S  I+
Sbjct: 181 FRRLENLGFTDAARATTDEPGLYSFWDYQAGAWPKNNGIRIDHLMLSAEAADRLESVSIE 240

Query: 243 TKPRGWTKPSDHTPV 257
              R W KPSDH PV
Sbjct: 241 KHVRAWEKPSDHVPV 255


>gi|326386341|ref|ZP_08207964.1| exodeoxyribonuclease III [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326209002|gb|EGD59796.1| exodeoxyribonuclease III [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 267

 Score =  217 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 102/261 (39%), Positives = 156/261 (59%), Gaps = 5/261 (1%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           S + VA++N+N I+AR+  L  W++E  PDI CLQE KT+D+ FP     ++ Y     G
Sbjct: 7   SSIKVASFNINGIKARLPRLIEWLEETQPDIACLQEIKTQDEGFPAADFAAIGYEAIWHG 66

Query: 62  QKSYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           QK +NGVAIL++  +P+E+   L G+  D  +R++EA        LR+  +YLP+GNP  
Sbjct: 67  QKGFNGVAILARGERPVEVQRGLAGEPEDEHSRYLEADV----MGLRVVCIYLPNGNPQP 122

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             K+D K+ W++R     +Q    E P +  GDYN+IP+ +D ++     +DA    E R
Sbjct: 123 GPKFDYKLRWMERLKTRMAQIAAEEVPALVIGDYNVIPRDNDIWSTRAMADDALMQPESR 182

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            ++++L + G+TDA+   +    +Y+FWDY A +W ++ G RIDH +LSPE    L +A 
Sbjct: 183 AAYRRLLHAGWTDALGLLNPRGGVYTFWDYQAGAWQRDHGFRIDHALLSPELADRLVAAG 242

Query: 241 IDTKPRGWTKPSDHTPVIVSL 261
           +D   RG  K SDH PV VS+
Sbjct: 243 VDKTYRGREKASDHAPVWVSI 263


>gi|254460874|ref|ZP_05074290.1| exodeoxyribonuclease III [Rhodobacterales bacterium HTCC2083]
 gi|206677463|gb|EDZ41950.1| exodeoxyribonuclease III [Rhodobacteraceae bacterium HTCC2083]
          Length = 259

 Score =  217 bits (552), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 122/258 (47%), Positives = 163/258 (63%), Gaps = 1/258 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+N+N I+ARI  L  W+K+  PD+  LQE K+ D+ FP E  + + Y++ET GQK
Sbjct: 1   MKIATFNINGIKARIAALPEWLKDAQPDVALLQEIKSVDEGFPRELFEDMGYNVETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           S+NGVAILSK    ++   LPGDD D QAR+IEAT  +  Q +R+  LYLP+GNP    K
Sbjct: 61  SFNGVAILSKLPLEDVRRGLPGDDSDEQARWIEAT-VVGKQAIRVCGLYLPNGNPAPGPK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           YD K++W+ R    A   L  E P + AGDYNIIPQ  D  +P +W+ DA    E R ++
Sbjct: 120 YDYKLAWMARLQARAEALLAEETPFLMAGDYNIIPQDEDARHPEVWQEDALARPESRAAY 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           ++L N+G T+A RA       YSFWDY A +W+K+ GIRIDH +LSP    +L   +ID 
Sbjct: 180 RRLVNLGLTEAFRARVHGPEHYSFWDYQAGAWNKDDGIRIDHFLLSPAVADILVDCQIDM 239

Query: 244 KPRGWTKPSDHTPVIVSL 261
             R   KPSDH PV V L
Sbjct: 240 HVRAGEKPSDHVPVWVEL 257


>gi|159044435|ref|YP_001533229.1| putative Exodeoxyribonuclease III [Dinoroseobacter shibae DFL 12]
 gi|157912195|gb|ABV93628.1| putative Exodeoxyribonuclease III [Dinoroseobacter shibae DFL 12]
          Length = 259

 Score =  216 bits (551), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 122/258 (47%), Positives = 163/258 (63%), Gaps = 1/258 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+N+N I+ARI+ L  W++E +PD++ LQE K+ D  FP E  + + Y +ET GQK
Sbjct: 1   MQIATFNINGIKARINALPDWLREASPDVVVLQEIKSVDAAFPRELFEDMGYTVETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           S+NGVAILSK    ++   LPGDD D QAR+IEAT       +R+  LYLP+GNP    K
Sbjct: 61  SFNGVAILSKLPLEDVTRGLPGDDGDEQARWIEATVMG-DVPVRVCGLYLPNGNPAPGPK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           YD K++W+ R    A++ L  EEP + AGDYNIIP   D   P  W  DA      R +F
Sbjct: 120 YDYKLAWMARLKTRAAELLAAEEPALMAGDYNIIPLDEDAARPEAWRKDALALPASRAAF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           +++ N+GFTDA R        YSFWDY A +W +N GIRIDHI+++P+   L+   RID 
Sbjct: 180 REILNLGFTDAFRTRVPGPGHYSFWDYQAGAWQRNDGIRIDHILMTPDCADLMRDCRIDA 239

Query: 244 KPRGWTKPSDHTPVIVSL 261
             RG  KPSDH PV+V L
Sbjct: 240 AVRGGEKPSDHVPVVVDL 257


>gi|209964343|ref|YP_002297258.1| exodeoxyribonuclease III [Rhodospirillum centenum SW]
 gi|209957809|gb|ACI98445.1| exodeoxyribonuclease III [Rhodospirillum centenum SW]
          Length = 257

 Score =  216 bits (551), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 118/259 (45%), Positives = 163/259 (62%), Gaps = 5/259 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS++AR+ N+ +W+    PD++ LQE K E  +FP    + L Y +   GQK
Sbjct: 1   MKIATWNVNSVKARLPNVLSWLNAAAPDVVLLQEIKCETASFPALEFEPLGYRVHAVGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           SYNGVAILS+    +++  LPG+  DVQAR++E T       LRI +LYLP+GNP+ S K
Sbjct: 61  SYNGVAILSRLPVEDLIERLPGEPEDVQARYVEGTIGG----LRIASLYLPNGNPVGSEK 116

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W++R      + L  E P +  GDYN+IP P D Y+P  W  DA F  E R+ F
Sbjct: 117 YPYKLRWMERLKAHVGELLAREVPFVLGGDYNVIPAPEDVYDPEGWSGDALFRRETREKF 176

Query: 184 QKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           +++ N+G T+A RA H    H Y+FWDY A +W ++ G+RIDH +LSP+A   L    ID
Sbjct: 177 REILNLGLTEAFRALHPAARHAYTFWDYQAGAWPRDLGLRIDHFLLSPQAADRLAGCTID 236

Query: 243 TKPRGWTKPSDHTPVIVSL 261
             PRG  K SDHTPV++ L
Sbjct: 237 RSPRGQEKASDHTPVLLDL 255


>gi|46201885|ref|ZP_00208288.1| COG0708: Exonuclease III [Magnetospirillum magnetotacticum MS-1]
          Length = 258

 Score =  216 bits (551), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 116/259 (44%), Positives = 159/259 (61%), Gaps = 5/259 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+RAR+ N+  W+    PD++ LQE K +D +FP   +++  Y     GQK
Sbjct: 3   LRIATWNVNSVRARLGNVLDWLGSFAPDVVLLQEIKCQDHDFPRLEIEAAGYQTAVHGQK 62

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           SYNGVAILS++   +I   LPGD+ D QAR+IEAT        R+ +LYLP+GNP    K
Sbjct: 63  SYNGVAILSRHAMSDISLRLPGDESDEQARYIEATIEGW----RLASLYLPNGNPAPGDK 118

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           YD K++W+ R    A   L  + P +  GD+NI P   D Y+P  W+NDA    + R +F
Sbjct: 119 YDYKLAWMARLRAHAQSLLTQDIPFVLGGDFNICPTDDDVYDPPNWQNDALCRPDSRAAF 178

Query: 184 QKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           + + N+G T+A RA H      YSFWDY A +W +++G+RIDH +LSP A   L +  ID
Sbjct: 179 RAIVNLGLTEAFRALHPEEKGRYSFWDYQAGAWQRDEGLRIDHFLLSPRAADHLQACDID 238

Query: 243 TKPRGWTKPSDHTPVIVSL 261
             PRG  K SDHTPV + L
Sbjct: 239 RAPRGKEKASDHTPVWIEL 257


>gi|317404954|gb|EFV85317.1| exodeoxyribonuclease III [Achromobacter xylosoxidans C54]
          Length = 260

 Score =  216 bits (551), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 89/258 (34%), Positives = 134/258 (51%), Gaps = 1/258 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+  R+  +  W+  N  D++C+QE K  D  FP    +   YH    GQK
Sbjct: 1   MKLATWNVNSLNVRLPQVLDWLAANPVDVLCIQELKLTDDKFPEAAFKEAGYHAVWAGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAI+S+     +V +LP    D Q R +  TF      +R+   Y P+G  + S K
Sbjct: 61  TYNGVAIVSRVPGTSMVRNLP-TYEDPQQRVLALTFPSADGDVRVVCAYCPNGQSVGSDK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W      + +  ++    L   GDYN+ P   D +NP  WE     +   RQ+ 
Sbjct: 120 YAYKLEWFAAMRAWLADEIKQYPRLAVLGDYNVAPADEDVHNPEKWEGQVLVSEPERQAL 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + L ++G  D+ R        +S+WDY   ++ +N G+RIDHI+LSP       +  ID 
Sbjct: 180 RDLIDLGLADSFRLFEQPEKSFSWWDYRQFAFRRNAGLRIDHILLSPPLVKRCTACVIDK 239

Query: 244 KPRGWTKPSDHTPVIVSL 261
           +PR   +PSDH PV+ +L
Sbjct: 240 EPRRNEQPSDHAPVVATL 257


>gi|15889021|ref|NP_354702.1| exonuclease III [Agrobacterium tumefaciens str. C58]
 gi|15156812|gb|AAK87487.1| exonuclease III [Agrobacterium tumefaciens str. C58]
          Length = 265

 Score =  216 bits (551), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 141/255 (55%), Positives = 184/255 (72%), Gaps = 1/255 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+N ++ARI NL  W+K+++PDI+CLQE K+ D+ FP   +++L YHIET GQK
Sbjct: 1   MKIATWNINGVKARIENLCQWLKDSSPDIVCLQEIKSVDEGFPRLEIEALGYHIETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122
            +NGVA+LSK +P E+   LPGDD D QARFIE  F++    +R+ +LYLP+GNP     
Sbjct: 61  GFNGVALLSKVKPDEVNRGLPGDDADEQARFIEGVFSVEGGAIRVCSLYLPNGNPPDDPV 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           KY  K++W++R  RFA  RL +EEPLI AGDYN+IP+P DC++P +WE DA F  + R +
Sbjct: 121 KYPYKLAWMERLRRFAEDRLAMEEPLILAGDYNVIPEPFDCHDPRVWEGDALFLPKTRAA 180

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F+KL+N+GFTDA RAT D   LYSFWDY A +W KN GIRIDH+MLS EA   L S  I+
Sbjct: 181 FRKLENLGFTDAARATTDAAGLYSFWDYQAGAWPKNNGIRIDHLMLSAEAADRLQSVEIE 240

Query: 243 TKPRGWTKPSDHTPV 257
              R W KPSDH PV
Sbjct: 241 KHVRAWEKPSDHVPV 255


>gi|254437353|ref|ZP_05050847.1| exodeoxyribonuclease III [Octadecabacter antarcticus 307]
 gi|198252799|gb|EDY77113.1| exodeoxyribonuclease III [Octadecabacter antarcticus 307]
          Length = 266

 Score =  216 bits (551), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 119/265 (44%), Positives = 158/265 (59%), Gaps = 6/265 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+N+N ++ARI  L  W++ + PD+  LQE K+ D+ FP E  ++L Y +ET GQK
Sbjct: 1   MKIATFNINGVKARIGALTDWLEASKPDVALLQEIKSVDEGFPREHFENLGYRVETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT------FTINTQTLRIGNLYLPHGN 117
            +NGVAILSK    +I   LP      +    +          I  + +RI  LYLP+GN
Sbjct: 61  GFNGVAILSKLPLEDISRGLPDAAGAGREGVDDIEARYIEATVIGEKAIRICGLYLPNGN 120

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
           P    KYD K+ W+ R    A Q + LEEP + AGDYNIIPQP D   P +W +DA F  
Sbjct: 121 PAPGPKYDYKLRWMDRLKTRAQQLMALEEPFLMAGDYNIIPQPEDAARPNVWTDDALFRP 180

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
           + R +F++L N+G T+A RA H     YSFWDY A +W KN GIRIDH +LS +   LL 
Sbjct: 181 DSRAAFRRLLNLGLTEAFRACHQGSGHYSFWDYQAGAWDKNDGIRIDHFLLSNQCADLLK 240

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLD 262
            A I++  RG  KPSDH PV V LD
Sbjct: 241 DAWIESGVRGREKPSDHVPVWVELD 265


>gi|296284849|ref|ZP_06862847.1| hypothetical protein CbatJ_14571 [Citromicrobium bathyomarinum
           JL354]
          Length = 257

 Score =  216 bits (551), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 92/258 (35%), Positives = 142/258 (55%), Gaps = 2/258 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+N+N I+AR+  L  W++E  PD+ CLQE K++D  FP    +++ Y     GQK
Sbjct: 1   MRIATFNINGIKARLPRLLEWLEETQPDVACLQEIKSQDDGFPASEFEAIGYQALWHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           S+NGVA+L+K               +   +       ++   + I NLYLP+GNP    K
Sbjct: 61  SFNGVAVLAKQGLTMEERQRGLPGDESDDQARYLEVEVDG--VVIANLYLPNGNPHPGPK 118

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +D K++W++R     +     E+P I  GD+N+IPQ  D ++P    +DA    E R ++
Sbjct: 119 FDYKLAWMERLRARMAALWAQEKPTIVLGDFNVIPQDKDVWSPPAMADDALMQPESRDAY 178

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            +L   G+TDAI   +    +++FWDY   +W ++ G RIDH +LSPE    L +A +D 
Sbjct: 179 ARLLADGWTDAIDTLNPRGGVWTFWDYQRGAWQRDHGFRIDHCLLSPELADRLQAAGVDK 238

Query: 244 KPRGWTKPSDHTPVIVSL 261
             RG  K SDH PV V +
Sbjct: 239 HARGREKASDHAPVWVEI 256


>gi|84497619|ref|ZP_00996441.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Janibacter
           sp. HTCC2649]
 gi|84382507|gb|EAP98389.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Janibacter
           sp. HTCC2649]
          Length = 262

 Score =  216 bits (551), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 75/261 (28%), Positives = 135/261 (51%), Gaps = 1/261 (0%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +V +ATWNVNSIR+RI  + AW++  + D++ +QETK  ++ FPF+  ++L Y +   G 
Sbjct: 1   MVRIATWNVNSIRSRIDRVEAWLERTDVDVLAIQETKCREEQFPFDRFEALGYAVAHHGL 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT-LRIGNLYLPHGNPITS 121
             +NGVAI S+    ++    P      +    EA     T   +R+ +LY+P+G  +  
Sbjct: 61  SQWNGVAIASRVGLDDVSRGFPDVPHWGEPAVAEARAIGATCNGIRLWSLYVPNGRALED 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
                K++W+++     +      +P    GD+NI PQ  D ++   + + +  +   R 
Sbjct: 121 PHMHYKLAWLEQLRVQTAAWAAEGQPFALMGDWNIAPQDEDVWSMDYYLDKSHVSPPERA 180

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           +FQ + + G +D +R        +++WDY   ++ K +G+RID I+ S      +  A I
Sbjct: 181 AFQAVLDAGVSDVVRPHTPEPGTFTYWDYQRLAFQKRRGMRIDFILASDPLAQRVRGAAI 240

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
           D + R     SDH PV++ ++
Sbjct: 241 DREERKGKGASDHAPVVIEVE 261


>gi|209523548|ref|ZP_03272102.1| exodeoxyribonuclease III [Arthrospira maxima CS-328]
 gi|209495953|gb|EDZ96254.1| exodeoxyribonuclease III [Arthrospira maxima CS-328]
          Length = 263

 Score =  216 bits (551), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 94/261 (36%), Positives = 140/261 (53%), Gaps = 3/261 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSIR R   + +W++  + D++CLQETK  D++FP    + L YH+   GQK
Sbjct: 1   MKIATWNVNSIRTRQDQVLSWLQGQDIDVLCLQETKVIDQDFPRSPFEELGYHVYIYGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLP---GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           +YNGVAI S+     ++       G D   +    +         + I N+Y+P+G+ + 
Sbjct: 61  AYNGVAIFSRLNIESVIMGFTPILGADQVGELDDQKRVIAGVIDDICIVNVYIPNGSSVG 120

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
           S KY+ K+ W+ R   +  Q L     L   GD+NI P+  D YNP   EN    +   R
Sbjct: 121 SDKYEYKLQWLNRLGDYLQQMLIKYPHLCICGDFNIAPEDRDIYNPQNRENHIMASAAER 180

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           Q+   + N+G  D  R        +++WDY A S+++N+G RIDH  LSP       +  
Sbjct: 181 QALDAIANLGLADGFRKFTQDGGHFTWWDYRAASFTRNRGWRIDHHYLSPGLYQNAIACY 240

Query: 241 IDTKPRGWTKPSDHTPVIVSL 261
           IDT+PR   KPSDH PVI+ +
Sbjct: 241 IDTEPRTQPKPSDHAPVILEI 261


>gi|83858693|ref|ZP_00952215.1| hypothetical protein OA2633_04301 [Oceanicaulis alexandrii
           HTCC2633]
 gi|83853516|gb|EAP91368.1| hypothetical protein OA2633_04301 [Oceanicaulis alexandrii
           HTCC2633]
          Length = 263

 Score =  216 bits (550), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 122/262 (46%), Positives = 169/262 (64%), Gaps = 1/262 (0%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
            ++VA+WNVNSI+AR+ N+  W+KE +PD+ CLQE KT D+ FP   ++ L Y++ET GQ
Sbjct: 2   TLSVASWNVNSIKARLPNVLDWLKEASPDVACLQEIKTVDEGFPRLEIEELGYNVETVGQ 61

Query: 63  KSYNGVAILSKYQPIEI-VTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           K+YNGVA+LSK    EI    LPGDD D QAR+IEA  + ++  +R+ ++YLP+GNP   
Sbjct: 62  KTYNGVALLSKRPIEEISQRALPGDDEDDQARYIEAVISADSGPVRVASIYLPNGNPAPG 121

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            KYD K++W+KR    A   L  EEP+I AGDYN+IP+  D ++   WE DA    E R 
Sbjct: 122 PKYDYKLAWMKRLKAHARSLLAFEEPVILAGDYNLIPRDSDVHDAAAWEGDALIRPESRD 181

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           +F K+  +G+++A        H Y+FWDY A +W KN GIRIDH++LSP+A   L +  I
Sbjct: 182 AFAKILWLGYSEAFMQADGRAHQYTFWDYQAGAWQKNNGIRIDHLLLSPQAADRLKAVEI 241

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
               RG  K SDH P +   D+
Sbjct: 242 AKDVRGKEKASDHVPFVGVFDL 263


>gi|318042025|ref|ZP_07973981.1| exodeoxyribonuclease III [Synechococcus sp. CB0101]
          Length = 276

 Score =  216 bits (550), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 91/273 (33%), Positives = 143/273 (52%), Gaps = 4/273 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A+WNVNS+R R+  + AW++   PD++CLQETK  D+ FP    + + YH    GQK
Sbjct: 1   MRIASWNVNSVRTRLDQVLAWLETEQPDVLCLQETKVADQLFPSAAFEQMGYHCAISGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHL----PGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
           +YNGVA++S+    ++        P D    +    +   +     +R+ NLY+P+G+ +
Sbjct: 61  AYNGVALISRLPLDDVQIGFSALLPDDPDAPELSEQKRVISALVDGVRVLNLYVPNGSSL 120

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
           +S KY  K++W+    R+ + + +  +PL   GD+NI P+  D ++P         T   
Sbjct: 121 SSDKYTYKLAWLACLKRYLAVQHDQGDPLCMVGDFNIGPEARDLHDPDRLSGGIMATDAE 180

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           RQ+         TD  R        +S+WDY + +W +++G RIDHI LS E        
Sbjct: 181 RQALSDALAGRLTDVFRVFEPGSGHWSWWDYRSGAWDRDQGWRIDHIYLSEELLDCATGC 240

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQD 272
            ID  PRG T+PSDH PV+V+L   E      D
Sbjct: 241 VIDKTPRGNTQPSDHAPVVVNLAWDEETDASDD 273


>gi|289207194|ref|YP_003459260.1| exodeoxyribonuclease III Xth [Thioalkalivibrio sp. K90mix]
 gi|288942825|gb|ADC70524.1| exodeoxyribonuclease III Xth [Thioalkalivibrio sp. K90mix]
          Length = 255

 Score =  216 bits (550), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 88/258 (34%), Positives = 137/258 (53%), Gaps = 5/258 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A+WNVNS++ R+  +  W+  +  DI+ LQETK  D+NFP   +    Y +   GQK
Sbjct: 1   MKIASWNVNSLKVRLPQVLDWLGSSRTDILALQETKLTDENFPVSAIHEAGYEVVYSGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAILS+ Q  ++VT  PG                    +R+ NLY+ +G  + + K
Sbjct: 61  TYNGVAILSRTQATDVVTDPPG-----LEDAQRRILAATIGDIRVVNLYVVNGENVGTEK 115

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W+ R   + +  +E    L+  GD+NI P+  D ++P  W      +   R++ 
Sbjct: 116 YAYKLDWLARMRSWLAAEIEAHPKLVVLGDFNIAPEDRDVHDPEAWHERILCSTPEREAL 175

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             L  +G  D  RA       +S++DY A S+ +N+G+RID ++ SP     L +A ID 
Sbjct: 176 AALTELGLADTFRAFEQPEEEFSWFDYRAASFRRNRGLRIDLVLASPALLKRLTAAGIDR 235

Query: 244 KPRGWTKPSDHTPVIVSL 261
           +PRGW +PSDH PV    
Sbjct: 236 EPRGWERPSDHAPVWAEF 253


>gi|293604886|ref|ZP_06687283.1| exodeoxyribonuclease III [Achromobacter piechaudii ATCC 43553]
 gi|292816714|gb|EFF75798.1| exodeoxyribonuclease III [Achromobacter piechaudii ATCC 43553]
          Length = 260

 Score =  216 bits (550), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 88/259 (33%), Positives = 140/259 (54%), Gaps = 1/259 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+  R+  +  W+  N  D++C+QE K  D  FP    +   YH    GQK
Sbjct: 1   MKLATWNVNSLNVRLPQVLDWLAANPVDVLCIQELKLTDDKFPEAAFKEAGYHAVWAGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAI+S+    ++V ++PG D D Q R +  TF      +R+   Y P+G  + S K
Sbjct: 61  TYNGVAIVSRMPGTKMVRNIPGHD-DHQQRVLALTFPSPEGDVRVVCAYCPNGQSLDSEK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K++W +    + ++ ++    L   GDYN+ P   D +NP  WE     +   R + 
Sbjct: 120 YQYKLAWFEAMREWLAEEIKQYPRLAVLGDYNVAPADEDVHNPEKWEGHVLVSEPERAAL 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + L ++G TD+ R        +S+WDY   ++ +N G+RIDH++LS        +  ID 
Sbjct: 180 RALLDLGLTDSFRLFEQPEKSFSWWDYRQFAFRRNAGLRIDHVLLSAPLVKRCVACVIDK 239

Query: 244 KPRGWTKPSDHTPVIVSLD 262
           +PR   +PSDH PV+ +L+
Sbjct: 240 EPRRNEQPSDHAPVVATLE 258


>gi|162456399|ref|YP_001618766.1| exodeoxyribonuclease III [Sorangium cellulosum 'So ce 56']
 gi|161166981|emb|CAN98286.1| exodeoxyribonuclease III [Sorangium cellulosum 'So ce 56']
          Length = 269

 Score =  216 bits (550), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 83/258 (32%), Positives = 135/258 (52%), Gaps = 2/258 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A+WNVNSIR R+  L +W+    PD++C+QETK ED +FP   L  + Y     GQK
Sbjct: 1   MRIASWNVNSIRTRLEQLTSWLVRAAPDVVCMQETKVEDGSFPEAALSEVGYRSVIFGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           SYNGVAI +++        +       +            + +R+ N+Y+P+G  + +  
Sbjct: 61  SYNGVAIATRFGLSVD--DVKKGLDGDEQDVARRMLAATIEGIRVINVYVPNGQAVGTPA 118

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K++W++R       R   ++ ++  GD+N+ P+  D   P  WE    F  + R + 
Sbjct: 119 FAYKLAWLERLRSELEARYRPDQQIMICGDFNVAPEAIDVAEPKKWEGQVLFHPDERAAL 178

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            +L   G  DA RA H     YS+WDY   ++ +NKG+RID  +++    +      IDT
Sbjct: 179 GRLMEWGLVDAFRACHPAKEAYSWWDYRMGAFRRNKGLRIDLALVTRPLAARCTDVSIDT 238

Query: 244 KPRGWTKPSDHTPVIVSL 261
           +PR   +PSDH PV+V +
Sbjct: 239 RPRELQRPSDHAPVVVEI 256


>gi|145594280|ref|YP_001158577.1| exodeoxyribonuclease III Xth [Salinispora tropica CNB-440]
 gi|145303617|gb|ABP54199.1| Exodeoxyribonuclease III [Salinispora tropica CNB-440]
          Length = 265

 Score =  216 bits (549), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 78/260 (30%), Positives = 131/260 (50%), Gaps = 2/260 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS++AR+  L  W+   NPD++CLQETK  D  FP   + +L Y + +    
Sbjct: 1   MRLATWNVNSVKARLPRLLDWLAGTNPDVVCLQETKCPDGAFPVAEVGTLGYTVASHSDG 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVAILS+    ++    P +           + T     LR+ ++Y+P+G  +    
Sbjct: 61  RWNGVAILSRVGLTDVTVGFPDEPGFPDPEARALSATCAG--LRVWSVYVPNGRTLDDPH 118

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K++W+          L    PL   GD+N+ P   D ++P ++      T   R + 
Sbjct: 119 YAYKLAWLGALRDTLEVELTGGAPLAVCGDFNVAPTDSDVWDPALFTGSTHVTPAERTAL 178

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             L+++G  D +       H +++WDY A  + +NKG+RID +  S     ++ +A +D 
Sbjct: 179 AALRDLGLDDVVPTPMKGPHPFTYWDYRAGMFHQNKGMRIDLVYASAPFARVVRAAYVDR 238

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
           + R    PSDH P++V  D+
Sbjct: 239 EARKGKGPSDHAPIVVDADL 258


>gi|126729725|ref|ZP_01745538.1| exodeoxyribonuclease III [Sagittula stellata E-37]
 gi|126709844|gb|EBA08897.1| exodeoxyribonuclease III [Sagittula stellata E-37]
          Length = 260

 Score =  216 bits (549), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 122/258 (47%), Positives = 167/258 (64%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+N+N I+ARI  L+ W++  NPD++  QE K+ D+NFP E  + + Y +ET GQK
Sbjct: 1   MKIATFNINGIKARIGALSDWLQSANPDVVLAQEIKSVDENFPREHFEDMGYAVETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVAILSK    ++   LPGD  D QAR+IEAT   +T  +R+  LYLP+GNP    K
Sbjct: 61  GFNGVAILSKLPLEDVSRGLPGDPDDEQARWIEATVMGDTTAVRLCGLYLPNGNPAPGPK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           YD K++W++R    A Q L  E P + AGDYN+IPQ  D   P  W +DA F  + RQ+F
Sbjct: 121 YDYKLAWMERLHTRAEQLLASEMPAVMAGDYNVIPQAEDAAKPDAWTDDALFLPQTRQAF 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           +++ N+GFT+A RA       YSFWDY A+SW +N GIRIDH++L+P+A  LL+   I+ 
Sbjct: 181 RRIVNLGFTEAFRARTQGPGHYSFWDYQANSWQRNNGIRIDHLLLTPQAADLLNDCWIEK 240

Query: 244 KPRGWTKPSDHTPVIVSL 261
             R   KPSDH PV   L
Sbjct: 241 DVRAAEKPSDHVPVWCDL 258


>gi|302866656|ref|YP_003835293.1| exodeoxyribonuclease III Xth [Micromonospora aurantiaca ATCC 27029]
 gi|302569515|gb|ADL45717.1| exodeoxyribonuclease III Xth [Micromonospora aurantiaca ATCC 27029]
          Length = 265

 Score =  216 bits (549), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 75/260 (28%), Positives = 127/260 (48%), Gaps = 2/260 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS++AR+  L  W+    PD++CLQETK  D  FP   +  L Y + +    
Sbjct: 1   MRLATWNVNSVKARLPRLLDWLATTKPDVVCLQETKCPDGAFPVAEVGELGYEVASHSDG 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVA+LS+    ++    PG+    +        +     LR+ ++Y+P+G       
Sbjct: 61  RWNGVAVLSRVGLADVTVGFPGEPGFPEPEARAI--SATCDELRVWSVYVPNGRAPDDPH 118

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K++W           +    P+   GD+N+ P   D ++P ++      T   R + 
Sbjct: 119 YAYKLAWFAALRDALEPEVAGALPVAVCGDFNVAPTDADVWDPALFVTSTHVTPAERAAL 178

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             L+++G  D +       H +++WDY A  + +NKG+RID +  S      + SA +D 
Sbjct: 179 AALRDLGLKDVVPTPMKGPHPFTYWDYRAGMFHQNKGMRIDLVYASASFARAVRSAYVDR 238

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
           + R    PSDH P++V  D+
Sbjct: 239 EARKGKGPSDHAPIVVDADL 258


>gi|116072855|ref|ZP_01470120.1| Exodeoxyribonuclease III xth [Synechococcus sp. BL107]
 gi|116064381|gb|EAU70142.1| Exodeoxyribonuclease III xth [Synechococcus sp. BL107]
          Length = 282

 Score =  216 bits (549), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 94/279 (33%), Positives = 144/279 (51%), Gaps = 5/279 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+R+R+  + +W+++  PD++CLQETK +D  FP +  ++  + +   GQK
Sbjct: 1   MRIATWNVNSVRSRLDQVLSWLEQAQPDLLCLQETKVDDPLFPSKAFEAKGWRVNFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT----QTLRIGNLYLPHGNPI 119
           SYNGVA++S+    ++     G+                       +R+ NLY+P+G+ +
Sbjct: 61  SYNGVALVSRAPLDDVRYGFVGELEKDPEALDLGEQKRVISALIDGVRVVNLYVPNGSSL 120

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
           TS KY  K++W+K   R+    L+  EPL   GD+NI  +  D + P         +   
Sbjct: 121 TSDKYPYKLTWLKCLKRYLEHPLKRGEPLCVVGDFNIALEARDMHAPDRLSGGIMASDAE 180

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           RQ+ Q     G  D  R        +S+WDY + +W +++G RIDHI L  E   L  S 
Sbjct: 181 RQALQMALANGLQDVFRVFEPDAGHWSWWDYRSGAWDRDRGWRIDHIYLCDELLGLARSC 240

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278
            I    RG  KPSDH PV V LD P P    +D  ++N 
Sbjct: 241 VIHKSVRGNDKPSDHAPVSVDLDWP-PSDDDEDGHNEND 278


>gi|78185266|ref|YP_377701.1| exodeoxyribonuclease III xth [Synechococcus sp. CC9902]
 gi|78169560|gb|ABB26657.1| Exodeoxyribonuclease III [Synechococcus sp. CC9902]
          Length = 282

 Score =  216 bits (549), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 92/277 (33%), Positives = 144/277 (51%), Gaps = 5/277 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+R+R+  + +W+++  PD++CLQETK +D  FP +  ++  + +   GQK
Sbjct: 1   MRIATWNVNSVRSRLDQVLSWLEQAQPDLLCLQETKVDDPLFPLQAFEAKGWRVHFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT----QTLRIGNLYLPHGNPI 119
           SYNGVA++S+    ++     G+       F               +R+ NLY+P+G+ +
Sbjct: 61  SYNGVALVSRAPLDDVRCGFVGELDKDPEAFELGEQKRVISALIDGVRVVNLYVPNGSSL 120

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
           TS KY  K+ W++   R+  Q L+  EPL   GD+NI  +  D ++P         +   
Sbjct: 121 TSDKYPYKLKWLRCLKRYLEQPLQRGEPLCVVGDFNIALEARDMHDPDRLSGGIMASDPE 180

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R++ Q     G  D  R        +S+WDY   +W +++G RIDHI L  E   L  S 
Sbjct: 181 REALQMALESGLQDVFRVFEPDGGHWSWWDYRTGAWDRDRGWRIDHIYLCDELLGLARSC 240

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQ 276
            I  + RG  KPSDH PV V LD P P    +   ++
Sbjct: 241 VIHKQVRGNEKPSDHAPVSVDLDWP-PSDDDESGDNE 276


>gi|84500937|ref|ZP_00999172.1| exodeoxyribonuclease III [Oceanicola batsensis HTCC2597]
 gi|84391004|gb|EAQ03422.1| exodeoxyribonuclease III [Oceanicola batsensis HTCC2597]
          Length = 260

 Score =  216 bits (549), Expect = 3e-54,   Method: Composition-based stats.
 Identities = 123/260 (47%), Positives = 168/260 (64%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+N+N I+AR   L  W+ E  PD++ LQE ++ D+NFP E  +   Y++ET GQK
Sbjct: 1   MRIATFNINGIKARHAALTTWLDEAGPDVVLLQEIRSVDENFPREIFEDRGYNVETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           S+NGVAILSK    ++   LPGDD D  AR+IEAT       LR+  LYLP+GNP    K
Sbjct: 61  SFNGVAILSKLPLEDVTRGLPGDDADDHARWIEATVVGEHAALRVCGLYLPNGNPAPGPK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           YD K++W++R    A Q +  EEP + AGDYNIIPQP D   P  W +DA F L+ R ++
Sbjct: 121 YDYKLAWMERLRERARQLIAQEEPALMAGDYNIIPQPEDVARPDAWRDDALFRLDSRDAY 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           +++ N+GFT+A R  H     YSFWDY A +W +N GIRIDHI+++P+   L+  A I+ 
Sbjct: 181 RRVLNLGFTEAFRTRHPAPGHYSFWDYQAGAWQRNNGIRIDHILMTPQCADLMQDAGIEK 240

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
           + RG  KPSDH PV V L +
Sbjct: 241 ELRGREKPSDHVPVWVDLAV 260


>gi|315503070|ref|YP_004081957.1| exodeoxyribonuclease iii xth [Micromonospora sp. L5]
 gi|315409689|gb|ADU07806.1| exodeoxyribonuclease III Xth [Micromonospora sp. L5]
          Length = 265

 Score =  216 bits (549), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 75/260 (28%), Positives = 127/260 (48%), Gaps = 2/260 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS++AR+  L  W+    PD++CLQETK  D  FP   +  L Y + +    
Sbjct: 1   MRLATWNVNSVKARLPRLLDWLATTKPDVVCLQETKCPDGAFPVAEVGELGYEVASHSDG 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVA+LS+    ++    PG+    +        +     LR+ ++Y+P+G       
Sbjct: 61  RWNGVAVLSRVGLADVTVGFPGEPGFPEPEARAI--SATCDELRVWSVYVPNGRAPDDPH 118

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K++W           +    P+   GD+N+ P   D ++P ++      T   R + 
Sbjct: 119 YAYKLAWFAALRDALESEVAGALPVAVCGDFNVAPTDADVWDPALFVTSTHVTPAERAAL 178

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             L+++G  D +       H +++WDY A  + +NKG+RID +  S      + SA +D 
Sbjct: 179 AALRDLGLEDVVPTPMKGPHPFTYWDYRAGMFHQNKGMRIDLVYASASFARAVRSAYVDR 238

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
           + R    PSDH P++V  D+
Sbjct: 239 EARKGKGPSDHAPIVVDADL 258


>gi|56697356|ref|YP_167724.1| exodeoxyribonuclease III [Ruegeria pomeroyi DSS-3]
 gi|56679093|gb|AAV95759.1| exodeoxyribonuclease III [Ruegeria pomeroyi DSS-3]
          Length = 268

 Score =  216 bits (549), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 120/268 (44%), Positives = 162/268 (60%), Gaps = 8/268 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+N+N I+AR   L AW+    PD+  LQE K+ D++FP E  +   Y++ET GQK
Sbjct: 1   MKIATFNINGIKARAEALPAWLDSAQPDVALLQEIKSVDESFPREMFEERGYNVETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT----FTINTQTLRIGNLYL----PH 115
            +NGVAILSK    ++   LPGDD D QAR+IEAT      +    L + N         
Sbjct: 61  GFNGVAILSKLPLEDVSRGLPGDDSDEQARWIEATVVGKQALRLCGLYLPNGNPVELTES 120

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
           G+P+   KYD K+ W++R    A++ +  EEP + AGDYNIIPQ  D   P  W  DA F
Sbjct: 121 GDPVPGGKYDYKLRWMERLQARATELMAAEEPALMAGDYNIIPQAEDAKRPEAWREDALF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
             E R +F+++ N+GFT+A RA       YSFWDY A +W++N GIRIDH +L+P+A  L
Sbjct: 181 RPESRAAFRRILNLGFTEAFRARVQGPGHYSFWDYQAGAWNRNDGIRIDHFLLTPQAADL 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +    ID + RG  KPSDH PV V LDI
Sbjct: 241 MRDCGIDKEVRGRDKPSDHVPVWVELDI 268


>gi|295395722|ref|ZP_06805913.1| exodeoxyribonuclease III [Brevibacterium mcbrellneri ATCC 49030]
 gi|294971422|gb|EFG47306.1| exodeoxyribonuclease III [Brevibacterium mcbrellneri ATCC 49030]
          Length = 261

 Score =  216 bits (549), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 73/261 (27%), Positives = 121/261 (46%), Gaps = 1/261 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + TWNVNS+RAR   + A++  ++ D++ +QE K +D  FP    +   Y +   G  
Sbjct: 1   MRIVTWNVNSVRARAERIGAFLDRSDVDVLAIQELKCKDAQFPAHVFEDRGYEVAFHGLN 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDD-LDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
            +NGVA+ S+    ++     G        +      +  T  +R  +LY+P+G  +   
Sbjct: 61  QWNGVAVASRVGLDDVEVGFEGVPGFGDDDQVEARAISAVTGGVRTYSLYVPNGRELDHP 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
            Y  K+ W+ +    A  RLE + P +  GD+N+ P   D ++   +E     +   R +
Sbjct: 121 HYAYKLEWLAQLRNEALVRLEQDVPFVMCGDFNVAPLDEDVWDMAAFEGATHVSQPERDA 180

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F  L + G T+  R       +Y+FWDY    + K +G+RID  + SP        A ID
Sbjct: 181 FNGLISAGLTEVTRQFTPGPGVYTFWDYQQLRFPKKQGMRIDFQLASPSLAERATGAFID 240

Query: 243 TKPRGWTKPSDHTPVIVSLDI 263
            + R     SDH PV V   +
Sbjct: 241 REERKGKGASDHAPVWVDYQL 261


>gi|254436254|ref|ZP_05049761.1| exodeoxyribonuclease III [Nitrosococcus oceani AFC27]
 gi|207089365|gb|EDZ66637.1| exodeoxyribonuclease III [Nitrosococcus oceani AFC27]
          Length = 254

 Score =  216 bits (549), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 89/258 (34%), Positives = 141/258 (54%), Gaps = 5/258 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+R R   +  W++ + PD++ LQETK  D +FP E  + + YH    GQK
Sbjct: 1   MKIATWNVNSLRVRFSQVVDWLEIHQPDVLALQETKLVDDSFPQEAFKEIGYHAAYSGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAIL +  P +I+T LP      +         +    +R+ NLY+P+G+ + S K
Sbjct: 61  TYNGVAILCRQAPKDILTDLPNLVDSQRRIL-----GVTVDDIRLLNLYVPNGSEVGSKK 115

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W+ R   +  + L     LI  GD+N+ P   D ++P IW      +   R++ 
Sbjct: 116 YAYKLDWLGRIKDYLQEALVEYPKLIVLGDFNVAPADQDVHDPDIWHETILCSTPEREAL 175

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           +++  +GF D+ R        +S+WDY   ++ +N+G+RID I++S           ID 
Sbjct: 176 KEILALGFQDSFRLFEQEAQSFSWWDYRGGAFRRNRGLRIDLILISKALVPKCTGCVIDK 235

Query: 244 KPRGWTKPSDHTPVIVSL 261
           +PR  T+PSDH PVI + 
Sbjct: 236 EPRRLTRPSDHAPVIATF 253


>gi|152980157|ref|YP_001354134.1| exodeoxyribonuclease III [Janthinobacterium sp. Marseille]
 gi|151280234|gb|ABR88644.1| exodeoxyribonuclease III [Janthinobacterium sp. Marseille]
          Length = 254

 Score =  215 bits (548), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 100/259 (38%), Positives = 149/259 (57%), Gaps = 5/259 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS++ R+  +  W+ +N  D++CLQETKT ++ FP   +++  YH+   GQK
Sbjct: 1   MKIATWNVNSLKVRLPQVLQWLTDNPVDVLCLQETKTVNEKFPLAEIEAAGYHVVYTGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAILS++   ++V + P  D + Q   I          +RI   Y+P+G  + S K
Sbjct: 61  TYNGVAILSRHPIDDVVKNNPLFDDEHQRIIIGTIQG-----VRIICAYIPNGQSLESDK 115

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W+       +  L+  E +   GDYNI P+  D ++P+ W+     +   R +F
Sbjct: 116 YQYKLRWLAGLHELLAHELKQHENVALLGDYNIAPEDRDVHDPVAWQGQVLVSEPERAAF 175

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            ++Q MGFTDA R       LYS+WDY    +  N+G+RIDHI+LSP       +  ID 
Sbjct: 176 VRMQEMGFTDAFRMFEQAEKLYSWWDYRQMGFRLNRGLRIDHILLSPSLAKRCTACVIDK 235

Query: 244 KPRGWTKPSDHTPVIVSLD 262
            PR W +PSDHTPVI +LD
Sbjct: 236 VPRKWEQPSDHTPVIATLD 254


>gi|163793122|ref|ZP_02187098.1| Exonuclease III [alpha proteobacterium BAL199]
 gi|159181768|gb|EDP66280.1| Exonuclease III [alpha proteobacterium BAL199]
          Length = 259

 Score =  215 bits (548), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 115/258 (44%), Positives = 166/258 (64%), Gaps = 3/258 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A+WNVNS++AR+ N+  W+K  +PD++ LQE KT D  FP   +++L Y     GQK
Sbjct: 1   MKIASWNVNSVKARLDNVLDWLKTASPDVVLLQEIKTVDDGFPRLEIEALGYQCAIHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           SYNGVAILSK    ++   L GDD D QAR++EAT       +R+  +YLP+GNP+TS K
Sbjct: 61  SYNGVAILSKVGLADVQPRLFGDDNDEQARYLEATV---GGEVRVATIYLPNGNPVTSEK 117

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K++W+KR    A++ L  E  ++  GDYN+IP   D ++P  W  DA    E R +F
Sbjct: 118 YPYKLAWMKRLKARATELLRAEGAVVLGGDYNVIPTDDDVHDPAAWAGDALCRPETRAAF 177

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           +++  +G+TDA RA   T H Y+FWDY   +W +++G+RIDH++LSP+A   L ++ IDT
Sbjct: 178 REILWLGYTDAFRALDQTVHKYTFWDYQGGAWQRDEGVRIDHLLLSPQAADRLTASGIDT 237

Query: 244 KPRGWTKPSDHTPVIVSL 261
            PR   K SDHTPV   +
Sbjct: 238 APRAKPKASDHTPVWCEI 255


>gi|91787699|ref|YP_548651.1| exodeoxyribonuclease III [Polaromonas sp. JS666]
 gi|91696924|gb|ABE43753.1| Exodeoxyribonuclease III [Polaromonas sp. JS666]
          Length = 267

 Score =  215 bits (548), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 86/262 (32%), Positives = 128/262 (48%), Gaps = 1/262 (0%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
             + +ATWNVNS+  R+  +  W+  N  D++CLQE K  D  FP + L    Y     G
Sbjct: 6   KTMKIATWNVNSLAVRLPQVLDWLAANPVDVLCLQELKLSDDKFPLQALADAGYQSAVFG 65

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           QK+YNGVAILS+     IV ++ G   +       AT    +  +R+ N Y  +G    +
Sbjct: 66  QKTYNGVAILSRTPARNIVKNIAGFTDEQSRVI-AATLDTPSGEVRVVNGYFVNGQAPGT 124

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            K++ K+ W+     +  + L     L+  GD+NI     D Y+          T + RQ
Sbjct: 125 EKFEYKMRWLDGLRAWLREELAEHSRLVLVGDFNITADDRDTYDAQGLHETIHHTADERQ 184

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             Q L  +G  DA R        YS+WDY   ++ +N+G+RID+I++S      + S  I
Sbjct: 185 HLQALLGLGLHDAFRLFEQPEKTYSWWDYREFAFRRNRGLRIDYILVSNALKPAVKSCLI 244

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
           D  PR   +PSDH PV+  LD 
Sbjct: 245 DKLPRKNERPSDHAPVVAELDW 266


>gi|254526744|ref|ZP_05138796.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9202]
 gi|221538168|gb|EEE40621.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9202]
          Length = 281

 Score =  215 bits (548), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 97/266 (36%), Positives = 148/266 (55%), Gaps = 4/266 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSIR R+  +  WI + NPDI+CLQETK  D +FP E  + L Y +E  GQK
Sbjct: 1   MLIATWNVNSIRTRLSQIIDWINQVNPDILCLQETKVMDDSFPTEPFEKLGYAVEVYGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT----INTQTLRIGNLYLPHGNPI 119
           SYNGVAI+SK +P  +     G     Q   I          +   ++I N+Y+P+G+ +
Sbjct: 61  SYNGVAIISKTKPENVKKGFYGCTNFNQNIEIFQDQKRLISADINNIKIINVYVPNGSSL 120

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
            S+K++ KI+W+     F  ++ +  E +   GD+NI P   D ++P  +E     +   
Sbjct: 121 ESSKFEYKINWLNCLGSFLDEQEKKGELICLLGDFNIAPSNLDIHDPKKYEGGIMASEIE 180

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R +   +      D+ R        +S+WDY  +++  NKG RIDHI +S E +S L S 
Sbjct: 181 RNALNNVLKKRLIDSFRIFEQNTGHWSWWDYRNNAFELNKGWRIDHIYISKELSSKLKSC 240

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPE 265
            ID  PRG+ +PSDH PV++ L++ +
Sbjct: 241 VIDCSPRGYLRPSDHAPVMIDLNLND 266


>gi|159037346|ref|YP_001536599.1| exodeoxyribonuclease III Xth [Salinispora arenicola CNS-205]
 gi|157916181|gb|ABV97608.1| exodeoxyribonuclease III Xth [Salinispora arenicola CNS-205]
          Length = 265

 Score =  215 bits (548), Expect = 5e-54,   Method: Composition-based stats.
 Identities = 80/260 (30%), Positives = 129/260 (49%), Gaps = 2/260 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS++AR+  L  W+    PD++CLQETK  D  FP   + +L Y + +    
Sbjct: 1   MRLATWNVNSVKARLPRLLDWLAGTEPDVVCLQETKCPDGAFPVAEVGALGYTVASHSDG 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVAILS+    E+    PG+             T     LR+ ++Y+P+G       
Sbjct: 61  RWNGVAILSRVGLTEVTVGFPGEPGFPDPEARALAATCAG--LRVWSVYVPNGRTPDDPH 118

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K++W+          L    PL   GD+N+ P   D ++P ++      T   R + 
Sbjct: 119 YAYKLAWLGALRDALEVELTGGPPLAVCGDFNVAPTDADVWDPALFTGSTHVTPAERVAL 178

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             L+++G  D +       H +++WDY A  + +NKG+RID +  S   T  + +A +D 
Sbjct: 179 SALRDLGLADVVPTPMKGPHPFTYWDYRAGMFHQNKGMRIDLVYASAPFTRAVRAAYVDR 238

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
           + R    PSDH P++V  D+
Sbjct: 239 EARKGKGPSDHAPIVVDADL 258


>gi|288960179|ref|YP_003450519.1| exodeoxyribonuclease III [Azospirillum sp. B510]
 gi|288912487|dbj|BAI73975.1| exodeoxyribonuclease III [Azospirillum sp. B510]
          Length = 257

 Score =  215 bits (547), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 115/258 (44%), Positives = 158/258 (61%), Gaps = 4/258 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS +AR+  +  W++  +PD+   QE K E   FP    + L YH+   GQK
Sbjct: 1   MKIATWNVNSAKARLPLITDWLRAVSPDVALFQEIKCETAAFPRAAFEELGYHVNAVGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVA+LSK    +++T LPG+  D QAR++EAT       +RI +LYLP+GNP+   K
Sbjct: 61  AYNGVALLSKTPAEDVLTRLPGEPEDEQARYVEATVAG----VRIASLYLPNGNPVPGEK 116

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W+ R    A   L  E P++  GDYNIIP+  D ++P  +  DA F  E R  F
Sbjct: 117 FAYKLRWMDRLYDHARGLLAREIPVVLGGDYNIIPEARDVFSPQAFAGDALFQPESRAKF 176

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + L N+G T+A RA HD    Y+FWDY A  W ++ G+RIDH +LSP+A   L   RID 
Sbjct: 177 RALLNLGLTEAYRALHDDDRAYTFWDYQAGCWPRDNGLRIDHFLLSPQAADRLAGCRIDR 236

Query: 244 KPRGWTKPSDHTPVIVSL 261
            PRG  K SDHTPV++ L
Sbjct: 237 GPRGLEKASDHTPVVLDL 254


>gi|257055607|ref|YP_003133439.1| Exodeoxyribonuclease III [Saccharomonospora viridis DSM 43017]
 gi|256585479|gb|ACU96612.1| Exodeoxyribonuclease III [Saccharomonospora viridis DSM 43017]
          Length = 259

 Score =  215 bits (547), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 75/260 (28%), Positives = 127/260 (48%), Gaps = 1/260 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSI AR+  + AW++   PD++CLQE K  D  FP + +  L Y + + G  
Sbjct: 1   MRIATWNVNSITARLPRVLAWLRSTQPDVLCLQELKCSDDGFPRDDITELGYDVASYGAN 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVAILS+    ++   L  +     A    A        +R+ ++Y+P+G       
Sbjct: 61  RWNGVAILSRVGLEDVTRGLVDEPTYEDALHPRAVAATCGG-VRVWSVYVPNGREPDHPH 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W++            + P    GD+NI P   D ++  ++ +    T   R++ 
Sbjct: 120 YTYKLRWLEALHTTVLAENSDDRPFAVLGDFNIAPTDDDVWDISLFADSTHVTEPERKAL 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            +L++ G TD +         Y++WDY   ++ KN+G+RID +  +      +  A +D 
Sbjct: 180 ARLRDAGLTDVVPRALKYDRPYTYWDYRQLAFPKNRGMRIDLVYANRPFADAVTDAYVDR 239

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
           + R     SDH PV+V L +
Sbjct: 240 EERKGKGASDHAPVVVDLTL 259


>gi|152968141|ref|YP_001363925.1| exodeoxyribonuclease III Xth [Kineococcus radiotolerans SRS30216]
 gi|151362658|gb|ABS05661.1| exodeoxyribonuclease III Xth [Kineococcus radiotolerans SRS30216]
          Length = 266

 Score =  215 bits (547), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 78/262 (29%), Positives = 127/262 (48%), Gaps = 4/262 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+RAR+  + AWI  ++ D++ LQETK +D+ FP +  + L Y +   G  
Sbjct: 1   MRLATWNVNSVRARLDRVLAWIDRSDVDVVALQETKCKDEQFPEQAFRDLGYEVAHHGLS 60

Query: 64  SYNGVAILSKYQPIEIVTHL--PGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
            +NGVA+LS+    ++ T                          +R+ +LY+P+G  +  
Sbjct: 61  QWNGVALLSRVGLEDVSTAFSPDVPRFGEPPVVEARAVGALCGGVRVWSLYVPNGRGLED 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEE--PLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
             Y  K+ W++R        L  +    +   GD+NI P   D ++P  +      +   
Sbjct: 121 PHYPYKLEWLERLREAGRGWLAQDPAAQVALVGDFNIAPTDEDVWDPEAFAGATHVSAPE 180

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R +F  L   GF D +R        Y++WDY    ++K +G+RID ++ SP   + +  A
Sbjct: 181 RAAFTALVEAGFADVVRPHAPGPGTYTYWDYQQLRFAKRQGMRIDFVLGSPALAARVSGA 240

Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261
            ID + R     SDH PV+V L
Sbjct: 241 TIDREERKGKGASDHAPVVVEL 262


>gi|323529504|ref|YP_004231656.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1001]
 gi|323386506|gb|ADX58596.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1001]
          Length = 269

 Score =  215 bits (547), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 107/271 (39%), Positives = 153/271 (56%), Gaps = 5/271 (1%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           M+ + +AT+N+N IR+R   L  W++   PDI+CLQE K  D  FP + L+   YH    
Sbjct: 1   MATLRIATFNINGIRSRQAALLQWLEREAPDIVCLQELKAADSAFPADALRDAGYHAIWQ 60

Query: 61  GQKSYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
           GQ ++NGVAILSK   P+E    LPG + D  +R++EA        L +  LYLP+GNP 
Sbjct: 61  GQSAWNGVAILSKGEPPLESRRGLPGFEDDTHSRYLEAAVGG----LLVCCLYLPNGNPQ 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K++ K+ W    +  A++ L    P++ AGD+N++P   D YNP  W  DA    E 
Sbjct: 117 PGPKFEYKLKWFDHLIDHAAKLLRSGHPVVLAGDFNVVPTDEDIYNPRSWLKDALLQPES 176

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R+ +++L   G+TDA+R       +Y+FWDY+   W  N G+RIDHI+LSP+    L  A
Sbjct: 177 RERYRRLVAQGWTDALRTHFGDERVYTFWDYFRRHWDTNSGLRIDHILLSPDLAPRLRDA 236

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQ 270
            +D   RG    SDH P  V LD+   R+K 
Sbjct: 237 GVDRWVRGEPHASDHAPTWVELDMGAKRRKA 267


>gi|126695849|ref|YP_001090735.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9301]
 gi|126542892|gb|ABO17134.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9301]
          Length = 281

 Score =  215 bits (547), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 98/264 (37%), Positives = 145/264 (54%), Gaps = 4/264 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSIR R+  +  WI + NPDI+CLQETK  D NFP E  + L Y +E  GQK
Sbjct: 1   MLIATWNVNSIRTRLSQIIDWINQVNPDILCLQETKVMDDNFPVEPFEKLGYSLEIYGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT----INTQTLRIGNLYLPHGNPI 119
           SYNGVAI+SK +P  +     G     Q   I          +   ++I N+Y+P+G+ +
Sbjct: 61  SYNGVAIISKIKPENVKKGFNGCTESNQNSEIFLDQKRLISADINGIKIINVYVPNGSSL 120

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
            S+K+  KI+W+     F  ++ +  E +   GD+N+ P   D ++P  +E     +   
Sbjct: 121 DSSKFAYKINWLNCLSSFLDEQEKKGELICLMGDFNVAPSNLDIHDPKKYEGGIMASEIE 180

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R + + +      D+ R        +S+WDY  + +  NKG RIDHI +S E TS L S 
Sbjct: 181 RNALKNVLKKRLIDSFRIFEQNTGHWSWWDYRNNGFELNKGWRIDHIYISKELTSKLKSC 240

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
            ID  PRG  +PSDH PV++ L++
Sbjct: 241 VIDCSPRGNLRPSDHAPVMIELNL 264


>gi|311105771|ref|YP_003978624.1| exodeoxyribonuclease III 1 [Achromobacter xylosoxidans A8]
 gi|310760460|gb|ADP15909.1| exodeoxyribonuclease III 1 [Achromobacter xylosoxidans A8]
          Length = 260

 Score =  215 bits (547), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 88/259 (33%), Positives = 136/259 (52%), Gaps = 1/259 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+  R+  +  W+  N  D++C+QE K  D  FP        YH    GQK
Sbjct: 1   MKLATWNVNSLNVRLPQVLDWLAANPVDVLCIQELKLTDDKFPEAAFTEAGYHAVWAGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAI+S+     +V ++PG + D Q R +  TF      +R+   Y P+G  + S K
Sbjct: 61  TYNGVAIISRVPGTSMVRNIPGYE-DPQQRVLALTFPSPEGDVRVVCAYCPNGQAVGSDK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W +    + +  ++    L   GDYN+ P   D +NP  WE     +   R++F
Sbjct: 120 YAYKLDWFEAMRAWLADEIKQYPRLAVLGDYNVAPADEDVHNPEKWEGQVLVSEPERKAF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             L ++G  D+ R        +S+WDY   ++ +N G+RIDH++LS        +  ID 
Sbjct: 180 GALLDLGLADSFRLFEQPEKSFSWWDYRQFAFRRNAGLRIDHVLLSAPLVKRCIACAIDK 239

Query: 244 KPRGWTKPSDHTPVIVSLD 262
           +PR   +PSDH PVI +L+
Sbjct: 240 EPRRNEQPSDHAPVIATLE 258


>gi|86605184|ref|YP_473947.1| exodeoxyribonuclease III [Synechococcus sp. JA-3-3Ab]
 gi|86553726|gb|ABC98684.1| exodeoxyribonuclease III [Synechococcus sp. JA-3-3Ab]
          Length = 261

 Score =  215 bits (546), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 92/262 (35%), Positives = 138/262 (52%), Gaps = 3/262 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNP-DIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + VATWNVNSIR R+  + AW+ +    D++CLQETK  D  FP    +   +H+E  GQ
Sbjct: 1   MQVATWNVNSIRTRLPQVLAWLDKQGSLDVLCLQETKVVDAEFPRAPFEERGFHVEVYGQ 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT-FTINTQTLRIGNLYLPHGNPITS 121
           K+YNGVA++S+  P ++                +        + +RI NLY+P+G  + S
Sbjct: 61  KAYNGVALISREVPEKVERGFAALLPAAAELDEQKRLIGGLYRGIRILNLYVPNGEAVGS 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            KY  K+ W+     +    L+  +P++  GD+NI P+  D Y+P           E + 
Sbjct: 121 DKYAYKLRWLACLKDYLQVALDQGQPILLCGDFNIAPEDRDIYDPGKAGEIMASEPERQ- 179

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           + QK+  +GF DA R  +     +S+WDY    + KN+G RIDH+ LSP       +  I
Sbjct: 180 ALQKILALGFEDAFRKFNPDPGHFSWWDYRGGGFQKNRGWRIDHLYLSPLLQDKATACWI 239

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
           D +PR   KPSDH PV+V L +
Sbjct: 240 DVEPRRAEKPSDHAPVVVELAV 261


>gi|119899170|ref|YP_934383.1| exodeoxyribonuclease III [Azoarcus sp. BH72]
 gi|119671583|emb|CAL95496.1| exodeoxyribonuclease III [Azoarcus sp. BH72]
          Length = 253

 Score =  215 bits (546), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 86/260 (33%), Positives = 138/260 (53%), Gaps = 7/260 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS++ R+ ++  W+  N PD +CLQE K EDK FP   LQ+  Y+    GQK
Sbjct: 1   MKIATWNVNSLKVRLPHVLDWLAANQPDALCLQELKLEDKGFPVAELQAAGYNAVFNGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAILS +   ++V  +PG   + +              +RI   Y P+G  + S K
Sbjct: 61  TYNGVAILSPHPLEDVVRDIPGFSDEQKRIIAATVNG-----VRIVCGYFPNGQAVGSDK 115

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           ++ K+ W+     +    L     L+  GD+NI P+  D +    W+++   +   R +F
Sbjct: 116 FEYKLRWLGALTEWLRAELTAHPRLVLGGDFNIAPEDRDAHPD--WKDEIHVSAPERAAF 173

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             L  +G  DA R        +S+WDY   ++ +N G+RIDH+++SP       +  +D 
Sbjct: 174 TALTALGLVDAFRLYDQPERAFSWWDYRMGAFRRNFGLRIDHLLVSPALQPACRACTVDK 233

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
            PR   +PSDH PV++ L++
Sbjct: 234 APRKLERPSDHAPVVLDLEV 253


>gi|220933200|ref|YP_002512099.1| exodeoxyribonuclease III [Thioalkalivibrio sp. HL-EbGR7]
 gi|219994510|gb|ACL71112.1| exodeoxyribonuclease III [Thioalkalivibrio sp. HL-EbGR7]
          Length = 255

 Score =  215 bits (546), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 85/258 (32%), Positives = 141/258 (54%), Gaps = 5/258 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS++ R+  +  W+    PD++ LQETK  D  FP E ++   YH    GQK
Sbjct: 1   MKIATWNVNSLKVRLPQVLDWLAAQQPDVLALQETKLTDDAFPVEAIREAGYHCVYSGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAIL++++ ++ +T + G D   +              +R+ NLY+ +G+ + S K
Sbjct: 61  TYNGVAILARHELLDPLTDIDGLDDPQRRILAATVDG-----VRVINLYVVNGSEVGSEK 115

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W+ +   F +  ++  E L+  GD+NI P+  D ++P  W      +   R++ 
Sbjct: 116 YAYKLDWLGKVTGFIAGEMKRHEKLVVLGDFNIAPEDRDVHDPEAWHEKILCSTPEREAL 175

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           +K+ ++G +D  R        +S+WDY A  + +N G+RID I+ SP  T    +  ID 
Sbjct: 176 KKILDLGLSDCFRRFEQPEQSFSWWDYRAAGFRRNLGLRIDLILSSPALTETCTACIIDV 235

Query: 244 KPRGWTKPSDHTPVIVSL 261
           +PR   +PSDH PV+   
Sbjct: 236 EPRRLERPSDHAPVVAEF 253


>gi|148360698|ref|YP_001251905.1| hypothetical protein LPC_2645 [Legionella pneumophila str. Corby]
 gi|296106237|ref|YP_003617937.1| exodeoxyribonuclease III [Legionella pneumophila 2300/99 Alcoy]
 gi|148282471|gb|ABQ56559.1| hypothetical protein LPC_2645 [Legionella pneumophila str. Corby]
 gi|158512142|gb|ABW69103.1| exodeoxyribonuclease III [Legionella pneumophila]
 gi|295648138|gb|ADG23985.1| exodeoxyribonuclease III [Legionella pneumophila 2300/99 Alcoy]
          Length = 256

 Score =  215 bits (546), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 91/261 (34%), Positives = 151/261 (57%), Gaps = 5/261 (1%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +  +A+WNVNS++ R+  +  W++ +  D++ +QETK  D NFP  +     YH+   GQ
Sbjct: 1   MFKLASWNVNSLKVRLEQVLQWLESSQVDVLAMQETKLTDDNFPVASFTDKGYHVIFSGQ 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K+YNGVAI+S+Y   +I T +P  +   +              +R+ NLY+P+G  +TS 
Sbjct: 61  KTYNGVAIISRYPMTDIQTDIPELEDPQRRILAATVKG-----IRLINLYVPNGGELTSD 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           KY  K+ W+K+  RF   +L +   +   GD+NI P+  D ++P+ WE     +   RQ+
Sbjct: 116 KYQYKLDWLKKVTRFIQHQLSIYSKVAVVGDFNIAPEDRDVHDPVEWEGCVLVSPAERQA 175

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F ++  +G  D+ R        +S+WDY A ++ +N+G+RIDH++LS E  +L   ++ID
Sbjct: 176 FMEILELGLHDSFRNFAQEEKAFSWWDYRAAAFRRNRGLRIDHVLLSHELNALCRQSKID 235

Query: 243 TKPRGWTKPSDHTPVIVSLDI 263
            +PR   +PSDH PV V L++
Sbjct: 236 KEPRKAERPSDHAPVWVELEL 256


>gi|157412901|ref|YP_001483767.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9215]
 gi|157387476|gb|ABV50181.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9215]
          Length = 281

 Score =  215 bits (546), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 96/266 (36%), Positives = 147/266 (55%), Gaps = 4/266 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSIR R+  +  WI + NPDI+CLQETK  D +FP E  + L Y +E  GQK
Sbjct: 1   MLIATWNVNSIRTRLSQIIDWINQVNPDILCLQETKVMDDSFPTEPFEKLGYAVEVYGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT----INTQTLRIGNLYLPHGNPI 119
           SYNGVAI+SK +P  +     G     Q   I          +   ++I N+Y+P+G+ +
Sbjct: 61  SYNGVAIISKTKPENVKKGFYGCTNFNQNIEIFQDQKRLISADINNIKIINVYVPNGSSL 120

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
            S+K+  KI+W+     F  ++ +  E +   GD+N+ P   D ++P  +E     +   
Sbjct: 121 ESSKFKYKINWLNCLASFLDEQEKKGELICLLGDFNVAPSNLDIHDPKKYEGGIMASEIE 180

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R +   +      D+ R        +S+WDY  +++  NKG RIDHI +S E +S L S 
Sbjct: 181 RNALNNVLKKRLIDSFRIFEQNTGHWSWWDYRNNAFELNKGWRIDHIYISKELSSKLKSC 240

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPE 265
            ID  PRG+ +PSDH PV++ L++ +
Sbjct: 241 VIDCSPRGYLRPSDHAPVMIDLNLND 266


>gi|85375417|ref|YP_459479.1| hypothetical protein ELI_12950 [Erythrobacter litoralis HTCC2594]
 gi|84788500|gb|ABC64682.1| hypothetical protein ELI_12950 [Erythrobacter litoralis HTCC2594]
          Length = 262

 Score =  215 bits (546), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 95/259 (36%), Positives = 145/259 (55%), Gaps = 1/259 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+N+N I+AR+  L  W++E  P + CLQE K++D  FP +  + + YH    GQK
Sbjct: 1   MRIATFNINGIKARLPRLIEWLEETRPTVACLQEIKSQDDGFPADEFEKIGYHAIWHGQK 60

Query: 64  SYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           S+NGVAIL+   +P E    L  D               +   +RI  LYLP+GNP    
Sbjct: 61  SFNGVAILADGVKPEETQRGLGVDGPKEGEGEQARYLEAHVNGVRIACLYLPNGNPHPGP 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           K+D K++W+++      +  + E+P I  GD+N+IP   D ++P   ++DA    E R +
Sbjct: 121 KFDYKLAWMEKLRARMRELWQSEQPTIVTGDFNVIPHDDDVWSPKAMQDDALMQPESRDA 180

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           +Q+    G+TDA+R  +    +++FWDY   +W ++ G RIDH +LSPE    L +  +D
Sbjct: 181 YQRQLADGWTDAVRTLNPRGGVWTFWDYQRGAWQRDHGFRIDHCLLSPELADRLTAVGVD 240

Query: 243 TKPRGWTKPSDHTPVIVSL 261
              RG  K SDHTPV V L
Sbjct: 241 KDYRGREKASDHTPVWVEL 259


>gi|71909260|ref|YP_286847.1| exodeoxyribonuclease III [Dechloromonas aromatica RCB]
 gi|71848881|gb|AAZ48377.1| Exodeoxyribonuclease III [Dechloromonas aromatica RCB]
          Length = 254

 Score =  214 bits (545), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 82/258 (31%), Positives = 131/258 (50%), Gaps = 5/258 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A+WNVNS++ R+ +L  W+    PD +CLQE K ED NFP   +++  Y +   GQK
Sbjct: 1   MKIASWNVNSLKVRLPHLLDWLAAAQPDALCLQELKLEDHNFPRAEIEAAGYQVAFSGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVA+L++    +++   P    + +               R+   Y+P+G  + S K
Sbjct: 61  TYNGVALLARQPIHDVICGNPHFPDEQKRLISGTVGDT-----RVVCAYMPNGQAVGSDK 115

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           YD K+ W+     +  + +     L   GDYNI P   D ++P  W  +   +   R +F
Sbjct: 116 YDYKLRWLDALAVWLGEEMSKYPKLALCGDYNIAPDDRDVHDPKAWAGNILCSEPERAAF 175

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q+   +G  D+ R        +S+WDY    + KN G+RIDH++LS    +   +A ID 
Sbjct: 176 QRFIGLGLNDSFRLFEQPEKTFSWWDYRMLGFQKNLGLRIDHVLLSAPLAAKCSAAGIDR 235

Query: 244 KPRGWTKPSDHTPVIVSL 261
            PR   +PSDH PV   +
Sbjct: 236 APRKLERPSDHAPVWAEI 253


>gi|237747770|ref|ZP_04578250.1| exodeoxyribonuclease III [Oxalobacter formigenes OXCC13]
 gi|229379132|gb|EEO29223.1| exodeoxyribonuclease III [Oxalobacter formigenes OXCC13]
          Length = 255

 Score =  214 bits (545), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 99/260 (38%), Positives = 146/260 (56%), Gaps = 5/260 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS++ R+ ++  W+++N  D++CLQETK  D  FP   + +  Y +   GQK
Sbjct: 1   MKIATWNVNSLKVRLPHVLQWLEDNPVDVLCLQETKLTDDKFPVMEIGAAGYQVAFTGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAILSK    +IV + P    + Q              +RI   Y+P+G  + S K
Sbjct: 61  TYNGVAILSKKPVTDIVKNNPLFPDEQQRIVAAT-----VDNIRIVCAYVPNGQAVGSEK 115

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W++   ++ ++  +    L   GDYNI P+  D Y+P+ WE +   +   R +F
Sbjct: 116 YSYKLDWLRSLTQWLAEERQKHPYLALLGDYNIAPEDRDVYDPVAWEGNVLVSPPERDAF 175

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + LQ++ F DA R        YS+WDY    + KN+G+RIDHI+LS        +  ID 
Sbjct: 176 RALQDIDFIDAYRLFEQPEKSYSWWDYRQLGFQKNRGLRIDHILLSKALAPHCTACTIDR 235

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
            PR WT+PSDHTPVI  LDI
Sbjct: 236 IPRKWTQPSDHTPVIAELDI 255


>gi|53802810|ref|YP_115457.1| exodeoxyribonuclease III [Methylococcus capsulatus str. Bath]
 gi|53756571|gb|AAU90862.1| exodeoxyribonuclease III [Methylococcus capsulatus str. Bath]
          Length = 256

 Score =  214 bits (545), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 88/259 (33%), Positives = 135/259 (52%), Gaps = 5/259 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+R R+  +  W+    P ++ +QETK  D  FP E L+++ YH    GQK
Sbjct: 1   MKIATWNVNSLRVRLPQVLDWLDSVQPGVLAVQETKLTDDAFPVEALRAVGYHAVYSGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVA+LSK    +++T  P  D   +         +    LRI NLY+P+G+ + S K
Sbjct: 61  TYNGVAVLSKAPVEDVLTDPPNLDDPQRRIL-----AVTAGPLRIINLYVPNGSEVGSDK 115

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W+ +   F ++ +      +  GD+NI P+  D ++P  W      +   R +F
Sbjct: 116 YAYKLDWLAKVRDFIAEEMAAHPHTVVLGDFNIAPEDRDVHDPESWREKILCSTPERDAF 175

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           +    +G +D  R        +S+WDY A  + +N G+RIDHI+ S        +  ID 
Sbjct: 176 RAWAGLGLSDLFRRFEQPEGSFSWWDYRAAGFRRNLGLRIDHILASLPLAGRCTACSIDK 235

Query: 244 KPRGWTKPSDHTPVIVSLD 262
            PR   +PSDH PVI   D
Sbjct: 236 TPRSLERPSDHAPVIAEFD 254


>gi|254293701|ref|YP_003059724.1| exodeoxyribonuclease III Xth [Hirschia baltica ATCC 49814]
 gi|254042232|gb|ACT59027.1| exodeoxyribonuclease III Xth [Hirschia baltica ATCC 49814]
          Length = 259

 Score =  214 bits (545), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 117/260 (45%), Positives = 163/260 (62%), Gaps = 1/260 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A+WNVNS+ AR+  +   +K    D++C QE K  D NFP   ++ + Y+I T GQK
Sbjct: 1   MKIASWNVNSVNARLPTVLEVLKNLELDVVCFQEIKCIDDNFPRLEIEDMGYNIITHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           SYNGVAILSK+   ++   LPGDD D QAR+IEA     T  +R+ ++YLP+GNP    K
Sbjct: 61  SYNGVAILSKHPIEDVQIGLPGDDEDDQARYIEALIMGETP-VRVASIYLPNGNPFPGPK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +D K++W+ R    A + L  EE ++ AGDYN IP+  DCY+P  W +DA    E R  F
Sbjct: 120 FDYKLAWMDRLNARAKELLSYEEAVVLAGDYNCIPRDEDCYDPAAWVDDALAQPETRGKF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           ++LQ MG+T+   A  +  H Y+FWDY A +W K+ GIRIDH++ SP+A   L S  I  
Sbjct: 180 RELQWMGYTEGFAARDNRGHQYTFWDYQAGAWQKDNGIRIDHLLCSPQAADKLKSVSIYK 239

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
             RG TKPSDH P+I   ++
Sbjct: 240 DARGMTKPSDHVPIIGEFEL 259


>gi|300312415|ref|YP_003776507.1| exodeoxyribonuclease III protein [Herbaspirillum seropedicae SmR1]
 gi|300075200|gb|ADJ64599.1| exodeoxyribonuclease III protein [Herbaspirillum seropedicae SmR1]
          Length = 255

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 94/258 (36%), Positives = 143/258 (55%), Gaps = 5/258 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS++ R+  +  W++EN  D++CLQETK  D  FP   + +  Y +E  GQK
Sbjct: 1   MKIATWNVNSLKVRLPQVLKWLEENPVDVLCLQETKLTDDKFPAAEIAAAGYLVEFSGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAILS++   ++V + P    + Q              +R    Y+P+G  + S K
Sbjct: 61  TYNGVAILSRHPMNDVVKNNPLFPDEQQRIIAATIEG-----VRYVCAYIPNGQSLESEK 115

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K++W+     + +Q       L   GDYNI P+  D ++P+ W+     +   R++F
Sbjct: 116 YPYKLNWLAALHEWLAQEKAKNPRLALLGDYNIAPEDRDVHDPVAWQGQVLVSEPEREAF 175

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           +KLQ +G TD+ R       +YS+WDY    +  N+G+RIDHI+LS E      +  ID 
Sbjct: 176 RKLQALGLTDSYRLFEQPEKMYSWWDYRQMGFRLNRGLRIDHILLSEELVPRCTACVIDK 235

Query: 244 KPRGWTKPSDHTPVIVSL 261
            PR W +PSDH PVI +L
Sbjct: 236 VPRKWEQPSDHAPVIATL 253


>gi|254413694|ref|ZP_05027463.1| exodeoxyribonuclease III [Microcoleus chthonoplastes PCC 7420]
 gi|196179291|gb|EDX74286.1| exodeoxyribonuclease III [Microcoleus chthonoplastes PCC 7420]
          Length = 264

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 94/263 (35%), Positives = 138/263 (52%), Gaps = 4/263 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSIR R  ++  W+  N  D++CLQETK  D+ FP    + L YH+   GQK
Sbjct: 1   MKIATWNVNSIRTRQDHVCQWLTANPVDVLCLQETKVVDEQFPRSRFEDLGYHLYVSGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT---QTLRIGNLYLPHGNPIT 120
           SYNGVA+ S+     +     G     +   ++    + T     +RI NLY+P+G  + 
Sbjct: 61  SYNGVALFSRKPLEAVTVGFTGVLTPEEVGELDGQKRLITGILDGVRIINLYVPNGAEVG 120

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPL-IFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
           S KY+ K+SW+K    +    LE +       GD+NI P   D +NP   +     +   
Sbjct: 121 SEKYEYKLSWLKLLKEYVRSLLETQPHELCICGDFNIAPDDRDIHNPKNKDKHIMASPAE 180

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           RQ+ +++  +G  DA R        +S+WDY    +S+N+G RIDH  L+P+        
Sbjct: 181 RQALEEVLALGLGDAFRKFTQDGGHFSWWDYRHGGFSRNRGWRIDHHYLTPKLYEAATRC 240

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
           RID +PR   KPSDH PVIV  +
Sbjct: 241 RIDVEPRKLEKPSDHAPVIVEFE 263


>gi|325982581|ref|YP_004294983.1| exodeoxyribonuclease III Xth [Nitrosomonas sp. AL212]
 gi|325532100|gb|ADZ26821.1| exodeoxyribonuclease III Xth [Nitrosomonas sp. AL212]
          Length = 261

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 92/259 (35%), Positives = 143/259 (55%), Gaps = 5/259 (1%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           V+ +ATWNVNS++ R+  +  W+  + PD++CLQE K  ++NFP   +++  Y     GQ
Sbjct: 2   VMKLATWNVNSLKVRLPQVIDWLVAHQPDVLCLQEIKLINENFPINEIKAAGYESVFAGQ 61

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K+YNGVAILSK Q   IVT +PG   + +              LR+   Y+P+G  + S 
Sbjct: 62  KTYNGVAILSKRQGSNIVTAIPGLADEQKRVIAATYGD-----LRVICAYVPNGENVESE 116

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           KY+ K+ W+  F ++  Q L   + L   GD+NI P+  D Y+  +W+     +   R +
Sbjct: 117 KYEYKLCWLPAFTQWLKQELIDYKRLAVLGDFNIAPEDRDVYDAELWKGKVLCSEPERSA 176

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F  + N+G  D+ R        Y++WDY   ++ +N+G+RIDHI+LS E  +   +  ID
Sbjct: 177 FGNMLNLGLADSFRLFEQPEKSYTWWDYRMLAFRRNQGLRIDHILLSEELCNACVTCAID 236

Query: 243 TKPRGWTKPSDHTPVIVSL 261
              R   +PSDH PV+V L
Sbjct: 237 KTMRKLERPSDHAPVLVEL 255


>gi|254454283|ref|ZP_05067720.1| exodeoxyribonuclease III [Octadecabacter antarcticus 238]
 gi|198268689|gb|EDY92959.1| exodeoxyribonuclease III [Octadecabacter antarcticus 238]
          Length = 266

 Score =  214 bits (545), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 119/265 (44%), Positives = 159/265 (60%), Gaps = 6/265 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+N+N ++ARI  L  W++ + PD+  LQE K+ D+ FP E +Q L Y +ET GQK
Sbjct: 1   MKIATFNINGVKARIGALTDWLEASKPDVALLQEIKSVDEGFPREHIQDLGYTVETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT------QTLRIGNLYLPHGN 117
            +NGVAILSK    ++   LP  +   +    +             + +RI  LYLP+GN
Sbjct: 61  GFNGVAILSKLPLEDVTRGLPDPEGAGRDGEDDIEARYIEATVMGEKAIRICGLYLPNGN 120

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
           P    KYD K+ W+ R    ASQ +ELEEP + AGDYNIIPQP D   P +W +DA F  
Sbjct: 121 PAPGPKYDYKLHWMDRLKARASQLIELEEPFLIAGDYNIIPQPEDAARPDVWADDALFRP 180

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
           + R +F++L N+G T+A RA H     YSFWDY A +W KN GIRIDH +LS +   LL 
Sbjct: 181 DSRAAFRRLLNLGLTEAFRACHQGSGHYSFWDYQAGAWDKNDGIRIDHFLLSNQCADLLK 240

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLD 262
              I++  RG  KPSDH PV V LD
Sbjct: 241 DCWIESDVRGREKPSDHVPVWVELD 265


>gi|54027277|ref|YP_121519.1| putative exonuclease [Nocardia farcinica IFM 10152]
 gi|54018785|dbj|BAD60155.1| putative exonuclease [Nocardia farcinica IFM 10152]
          Length = 303

 Score =  214 bits (544), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 76/276 (27%), Positives = 127/276 (46%), Gaps = 11/276 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSIR+R+  +  W+ E++ D++ +QETK  D  FPFE    L Y +   G  
Sbjct: 7   LRLATWNVNSIRSRLDRVTTWLDEHDIDVLAMQETKCRDDQFPFERFAELGYEVAHLGVN 66

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQ---------ARFIEATFTINTQTLRIGNLYLP 114
            +NGVAI S+    +I    PG     +                       +R+ +LY+P
Sbjct: 67  QWNGVAIASRVGLADIAPAFPGQPGFDKDAADSLISAPVVESRALAATCGGVRVWSLYVP 126

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEE--PLIFAGDYNIIPQPHDCYNPIIWEND 172
           +G  +    Y  K+ W+      A+  L  +    +   GD+NI P   D ++   +   
Sbjct: 127 NGRALDDPHYAYKLEWLAALRASAADWLAADPAAKIALVGDWNIAPTDDDVWSVEFFAGK 186

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
              +   R +F  + + GF D +R       +Y++WDY    + + +G+RID ++ SP  
Sbjct: 187 THTSQPERDAFAAILDTGFADVMRPFAPGPGVYTYWDYTRLRFPRKEGMRIDFVLASPAL 246

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268
            + +  A +D + R     SDH PVI   D+ +   
Sbjct: 247 AATVVDAGVDREARKGKGASDHAPVIAEFDLGDAPP 282


>gi|328886193|emb|CCA59432.1| Exodeoxyribonuclease III [Streptomyces venezuelae ATCC 10712]
          Length = 271

 Score =  214 bits (544), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 77/263 (29%), Positives = 132/263 (50%), Gaps = 1/263 (0%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           ++++ +ATWNVNSI AR+  L AW++ +  D++C+QETK   + FP E L++L Y     
Sbjct: 8   LALMRIATWNVNSITARLPRLLAWLESSGTDVLCVQETKCTAEQFPTEELRALGYESVVN 67

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
               +NGVA++S+    ++VT LPG           A        +R+ ++Y+P+G  + 
Sbjct: 68  ATGRWNGVALVSRVGLADVVTGLPGGPEYDGMDEPRAISATCGP-VRVWSVYVPNGREVA 126

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
              Y  K+ W++      ++    + P    GDYNI P   D ++   +E     T   R
Sbjct: 127 HEHYAYKLRWLEALKAAVAEDAAGDRPFAVLGDYNIAPTDDDVWDRAAFEGLTHVTEPER 186

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            +   L+  G +D +       H +++WDY    + KN+G+RID +  +      +  + 
Sbjct: 187 AALAGLREAGLSDVVPRPLKYDHPFTYWDYRQLCFPKNRGMRIDLVYGNKPFAEAVTDSY 246

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263
           +D + R     SDH PV+V LD+
Sbjct: 247 VDREERKGKGASDHAPVVVDLDV 269


>gi|302877385|ref|YP_003845949.1| exodeoxyribonuclease III Xth [Gallionella capsiferriformans ES-2]
 gi|302580174|gb|ADL54185.1| exodeoxyribonuclease III Xth [Gallionella capsiferriformans ES-2]
          Length = 255

 Score =  214 bits (544), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 90/258 (34%), Positives = 140/258 (54%), Gaps = 5/258 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS++ R+  +  W+  N  D++CLQETK +D +FP   L +  YH    GQK
Sbjct: 1   MKLATWNVNSLKVRLPQVLDWLAANPVDVLCLQETKQQDADFPDTELAAAGYHTVFAGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAILS+   I++   +PG + + +              +R+ ++Y+P+G    S K
Sbjct: 61  TYNGVAILSREAAIDVQIGIPGFEDEQKRVIAATFGD-----IRVVDVYIPNGQSPDSDK 115

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W+     +  + L     L+  GDYNI P+  D ++P  W  +   +   R +F
Sbjct: 116 YQYKLGWLAALHDWLKEELVRYPKLVLLGDYNIAPEDRDVHDPAAWVGNVLVSPPERDAF 175

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + L  +G TD+ R        +S+WDY    + +N G+RIDHI++S    +   S  ID 
Sbjct: 176 KSLLALGLTDSYRLFEQADKTFSWWDYRMMGFRRNLGMRIDHILISAPLVAQCKSCIIDK 235

Query: 244 KPRGWTKPSDHTPVIVSL 261
            PR   +PSDHTPV+V L
Sbjct: 236 APRKLERPSDHTPVVVEL 253


>gi|284053675|ref|ZP_06383885.1| exodeoxyribonuclease III [Arthrospira platensis str. Paraca]
 gi|291570470|dbj|BAI92742.1| exodeoxyribonuclease III [Arthrospira platensis NIES-39]
          Length = 263

 Score =  214 bits (544), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 93/261 (35%), Positives = 139/261 (53%), Gaps = 3/261 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSIR R   +  W++  + D++CLQETK  D++FP    + L YH+   GQK
Sbjct: 1   MKIATWNVNSIRTRQDQVLGWLQGQDIDVLCLQETKVIDQDFPRSPFEELGYHVYIYGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT---QTLRIGNLYLPHGNPIT 120
           +YNGVAI S+     I+          +   ++    +       + I N+Y+P+G+ + 
Sbjct: 61  AYNGVAIFSRLNIESIIMGFTPILSADKVGDLDDQKRVIAGVIDDICIINVYIPNGSSVG 120

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
           S KY+ K+ W+ R   +  Q L     L   GD+NI P+  D YNP   EN    +   R
Sbjct: 121 SDKYEYKLQWLNRLRDYLQQMLIKYPHLCICGDFNIAPEDRDIYNPQNRENHIMASAAER 180

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           Q+   + N+G  D  R        +++WDY A S+++N+G RIDH  LSP       +  
Sbjct: 181 QALDAIANLGLADGFRKFTQDGGHFTWWDYRAASFTRNRGWRIDHHYLSPGLYENAIACY 240

Query: 241 IDTKPRGWTKPSDHTPVIVSL 261
           IDT+PR   KPSDH PVI+ +
Sbjct: 241 IDTEPRTQPKPSDHAPVILEI 261


>gi|56751512|ref|YP_172213.1| exodeoxyribonuclease III [Synechococcus elongatus PCC 6301]
 gi|81301416|ref|YP_401624.1| exodeoxyribonuclease III [Synechococcus elongatus PCC 7942]
 gi|56686471|dbj|BAD79693.1| exodeoxyribonuclease III [Synechococcus elongatus PCC 6301]
 gi|81170297|gb|ABB58637.1| Exodeoxyribonuclease III [Synechococcus elongatus PCC 7942]
          Length = 265

 Score =  213 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 98/262 (37%), Positives = 145/262 (55%), Gaps = 4/262 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+R+R+ +L  W+ +   DI+CLQETK  D+ FP E LQ+L YH    GQK
Sbjct: 1   MRIATWNVNSVRSRLEHLQRWLTDQTLDIVCLQETKVVDEQFPLEPLQALGYHCAIAGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLP---GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           SYNGVAILS+    ++        G +        +   +  +  LRI NLY+P+G+ + 
Sbjct: 61  SYNGVAILSRQPLADVQIGFGAVLGAEAVGDLDEQKRVISGRSGDLRIINLYVPNGSELG 120

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EV 179
           S KYD K+ W+    ++ +   + E  +   GD+NI  +  D Y+P   E     +  E 
Sbjct: 121 SEKYDYKLRWLTCLQQYLTVLGDRESQIHICGDFNIALEDRDIYDPAGKETHIMSSPTER 180

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
               Q + ++GF DA R        +S+WDY   ++ +N+G RIDH  LS  A +   + 
Sbjct: 181 EALRQSVLSLGFVDAFRLFEAGADQFSWWDYRTGAFRRNRGWRIDHHYLSESAKARAIAC 240

Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261
            ID +PR W KPSDHTPV++ L
Sbjct: 241 HIDREPRTWEKPSDHTPVVLEL 262


>gi|297563086|ref|YP_003682060.1| exodeoxyribonuclease III Xth [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296847534|gb|ADH69554.1| exodeoxyribonuclease III Xth [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 275

 Score =  213 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 82/262 (31%), Positives = 129/262 (49%), Gaps = 3/262 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS RAR   + AW+  ++ D++ +QETK  D  FP   L    Y +   G  
Sbjct: 1   MRIATWNVNSARARAERIGAWLDRSDVDVLAIQETKARDDQFPASVLTDRGYEVAHHGLS 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT-LRIGNLYLPHGNPITST 122
            +NGVAI S+    ++    PG          EA     T   +++ +LY+P+G  +   
Sbjct: 61  QWNGVAIASRVGLEDVRIGFPGQPGYGDPEEAEARAIGATCGGVQVWSLYVPNGREVDHP 120

Query: 123 KYDDKISWIKRFLRFASQRL--ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
            Y  K+ W++      +  L  +    + + GD+NI P+  D ++   +E     T   R
Sbjct: 121 HYAYKLRWLEALREAGAASLAADPGAQIAYVGDFNIAPRDEDVWDMAAFEGSTHVTEPER 180

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            +F KL   GF + +RA      +Y++WDY   ++ K +G+RID ++ SP     +  A 
Sbjct: 181 VAFDKLVGAGFDEVVRAYTPGPGVYTYWDYKGLAFPKRRGMRIDFVLASPALRDRVSGAS 240

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           ID + R     SDH PVIV LD
Sbjct: 241 IDREERKGKGASDHAPVIVGLD 262


>gi|253997518|ref|YP_003049582.1| exodeoxyribonuclease III Xth [Methylotenera mobilis JLW8]
 gi|253984197|gb|ACT49055.1| exodeoxyribonuclease III Xth [Methylotenera mobilis JLW8]
          Length = 256

 Score =  213 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 93/259 (35%), Positives = 141/259 (54%), Gaps = 5/259 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+  R+ ++  W+  N PD++CLQETK ED  FP+     L YH    GQK
Sbjct: 1   MKLATWNVNSLNVRLPHVLDWLTANQPDVLCLQETKQEDSKFPYAAFSELGYHAVHIGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAILS++  + +  ++P  + D Q              +R+   Y+P+G  + S K
Sbjct: 61  TYNGVAILSRHPILNVQRNIPDFEDDQQRVLAADING-----VRMVCAYIPNGQAVDSDK 115

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W+     +    L     L   GDYNI P+  DC++P  WE     +   R++F
Sbjct: 116 YQYKMRWLSALNAWLKTELTQHAKLALLGDYNIAPEDRDCHDPAAWEGQILVSPLEREAF 175

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             L ++G +D+ R        +S+WDY    + +N G+RIDHI++S     L  +A ID 
Sbjct: 176 NHLVSLGLSDSFRLFEQPEKSFSWWDYRMMGFRRNLGMRIDHILVSDALKVLCAAAYIDK 235

Query: 244 KPRGWTKPSDHTPVIVSLD 262
            PR   +PSDHTPV++ L+
Sbjct: 236 APRKLERPSDHTPVVLELN 254


>gi|329940384|ref|ZP_08289665.1| exonuclease [Streptomyces griseoaurantiacus M045]
 gi|329300445|gb|EGG44342.1| exonuclease [Streptomyces griseoaurantiacus M045]
          Length = 259

 Score =  213 bits (543), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 79/260 (30%), Positives = 128/260 (49%), Gaps = 1/260 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSI AR+  L AW++ +  D++C+QE KT ++ FP E L+ L Y        
Sbjct: 1   MRIATWNVNSITARLPRLLAWLESSGTDVLCVQEAKTTEEQFPSEALRELGYESAVHATG 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVA++S+    ++V  LPGD      +   A        +R+ ++Y+P+G  +    
Sbjct: 61  RWNGVAVVSRVGLEDVVKGLPGDPGYEGVQEPRAVSATCGP-VRVWSVYVPNGREVDHPH 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W +      +     + P    GDYN+ P   D Y+   +E     T   R + 
Sbjct: 120 YAYKLQWFEALRAAVAGDAAGDRPFAVLGDYNVAPTDEDVYDRAAFEGSTHVTPAERAAL 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             L+  G TD +       H Y++WDY    + KN+G+RID +  +      +  A +D 
Sbjct: 180 ASLREAGLTDVVPRPLKYDHPYTYWDYRQLCFPKNRGMRIDLVYGNEPFAKAVQDAYVDR 239

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
           + R     SDH PV+V L++
Sbjct: 240 EERKGKGASDHAPVVVDLEV 259


>gi|91774528|ref|YP_544284.1| exodeoxyribonuclease III [Methylobacillus flagellatus KT]
 gi|91708515|gb|ABE48443.1| Exodeoxyribonuclease III [Methylobacillus flagellatus KT]
          Length = 255

 Score =  213 bits (542), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 89/258 (34%), Positives = 135/258 (52%), Gaps = 5/258 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+  R+  +  WI    PD++CLQETK ED  FPF+ L+   Y+    GQK
Sbjct: 1   MKLATWNVNSLNVRLPQVLDWIAVEKPDVLCLQETKQEDSKFPFDALKEAGYNAVHSGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAILS ++  ++   +PG + + +              +RI   Y+P+G  + S K
Sbjct: 61  TYNGVAILSPHEIEDVTYGIPGLNDEQKRLVAATIND-----IRIVCAYIPNGQSLDSDK 115

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W++    +    L     L   GDYNI P+  D ++P+ W      +   R +F
Sbjct: 116 YQYKLGWLEALTAYLKTELAAHPKLALLGDYNIAPEDRDVHDPVAWAGQVLVSEPERAAF 175

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + +  +G  D  R        +S+WDY    + +N G+RIDHI++S    S      ID 
Sbjct: 176 RAIMALGLHDGFRLFDQEPDSFSWWDYRMAGFRRNLGLRIDHILVSEALKSECMRCWIDK 235

Query: 244 KPRGWTKPSDHTPVIVSL 261
            PR   +PSDHTPV++ L
Sbjct: 236 GPRKLERPSDHTPVVLQL 253


>gi|170692673|ref|ZP_02883835.1| exodeoxyribonuclease III Xth [Burkholderia graminis C4D1M]
 gi|170142329|gb|EDT10495.1| exodeoxyribonuclease III Xth [Burkholderia graminis C4D1M]
          Length = 268

 Score =  213 bits (542), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 104/271 (38%), Positives = 152/271 (56%), Gaps = 5/271 (1%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           M+ + +AT+N+N IR+R   L  W++   PDI+CLQE K  D  FP + ++   YH    
Sbjct: 1   MATLRIATFNINGIRSRQTALLQWLEREAPDIVCLQELKAADSAFPADAVRDAGYHAIWH 60

Query: 61  GQKSYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
           GQ ++NGVAILSK   P+E    LPG + D  +R++E         L +  LYLP+GNP 
Sbjct: 61  GQSAWNGVAILSKGEAPLESRRGLPGFEADTHSRYLEVAVDG----LLVCCLYLPNGNPQ 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K++ K+ W    +  A+  L+   P++ AGD+N++P   D YNP  W  DA    E 
Sbjct: 117 PGPKFEYKLKWFDHLIDHAANLLKSGHPVVLAGDFNVVPTDEDIYNPRSWLKDALLQPES 176

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R+ +++L   G+TD++R       +Y+FWDY+   W  N G+RIDHI+LSP+    L  A
Sbjct: 177 RERYRRLLAQGWTDSLRTHFGDERVYTFWDYFRRHWDTNSGLRIDHILLSPDLAPRLRDA 236

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQ 270
            +D   RG    SDH P  V LD+   R+K 
Sbjct: 237 GVDRWVRGEPHASDHAPTWVELDMSARRRKT 267


>gi|197103425|ref|YP_002128803.1| exodeoxyribonuclease III [Phenylobacterium zucineum HLK1]
 gi|196480701|gb|ACG80228.1| exodeoxyribonuclease III [Phenylobacterium zucineum HLK1]
          Length = 262

 Score =  213 bits (542), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 105/260 (40%), Positives = 163/260 (62%), Gaps = 5/260 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+NVN +  R+  L  W++E  PD++CLQE K   + FP E ++   Y     GQK
Sbjct: 1   MRIATFNVNGVNGRLPVLLRWLEETRPDVVCLQELKAPQERFPAEAIERAGYGAIWAGQK 60

Query: 64  SYNGVAILSKY-QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           S+NGVA+L++  +P+EI   LPGD  D+Q+R++EA        + +  LY P+GNP    
Sbjct: 61  SWNGVAMLARGAEPVEIRRGLPGDTEDLQSRYLEAAVEG----VLVACLYAPNGNPAPGP 116

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           K+D K++W+ R  R A++ ++   P + AGD+NIIP   D Y P  W +DA F  E R +
Sbjct: 117 KFDYKLAWLARLNRRAAELVKTCTPAVLAGDFNIIPTELDAYKPERWVDDALFRPESRAA 176

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F+ L + G+ DA+R+ H    +++FWDY+ +++ ++ G+RIDH++LSP  +S L +A +D
Sbjct: 177 FEALLDQGWRDALRSLHPAERIFTFWDYFRNAFPRDAGLRIDHLLLSPTLSSRLVAAGVD 236

Query: 243 TKPRGWTKPSDHTPVIVSLD 262
              RGW K SDH PV V L+
Sbjct: 237 RHVRGWAKTSDHAPVWVELE 256


>gi|329850335|ref|ZP_08265180.1| exodeoxyribonuclease III [Asticcacaulis biprosthecum C19]
 gi|328840650|gb|EGF90221.1| exodeoxyribonuclease III [Asticcacaulis biprosthecum C19]
          Length = 262

 Score =  213 bits (541), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 119/262 (45%), Positives = 163/262 (62%), Gaps = 5/262 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+ AR+  L  W +E  PD+  LQE K  D+ FP E  +SL Y+    GQK
Sbjct: 1   MKLATWNVNSVNARLPLLLEWFREAAPDVCALQEIKCIDEKFPIEAFESLGYNCAVFGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           ++NGVAILSK+   ++   LPGDD D Q+R+IEA      Q +R   +YLP+GNP+ + K
Sbjct: 61  TWNGVAILSKFPLSDVTKGLPGDDSDEQSRYIEALVEAP-QPVRFVGIYLPNGNPLGTDK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W++R    A+Q L LEE  I  GD+NIIP   DC+   +W +DA +   VRQ++
Sbjct: 120 FAYKLRWLERLHARAAQLLTLEEATIITGDFNIIPTKADCWKESVWLDDALYQPAVRQAY 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q L+N+G+TDA        + Y+FWDY A +W KN+GIRIDH +LSP+A   L+   I  
Sbjct: 180 QGLKNLGYTDAFDVMPPEGNRYTFWDYQAGAWQKNEGIRIDHHLLSPQAADRLNGLVIHK 239

Query: 244 KPRGWT----KPSDHTPVIVSL 261
             RG T    KPSDH PV + L
Sbjct: 240 DTRGRTHDEAKPSDHVPVEIEL 261


>gi|37526441|ref|NP_929785.1| exonuclease III [Photorhabdus luminescens subsp. laumondii TTO1]
 gi|36785872|emb|CAE14923.1| Exodeoxyribonuclease III (exonuclease III) (EXO III) (AP
           endonuclease VI) [Photorhabdus luminescens subsp.
           laumondii TTO1]
          Length = 268

 Score =  213 bits (541), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 86/268 (32%), Positives = 129/268 (48%), Gaps = 8/268 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H LAA I+++ PD+I LQETK  D+ FP E +  L YH+   GQK
Sbjct: 1   MKFISFNINGLRARPHQLAAIIEQHQPDVIGLQETKVHDEAFPLEEVGKLGYHVFYYGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122
           ++ GVA+L++  P+ +    PGDD + Q R I A        L + N Y P G       
Sbjct: 61  AHYGVALLTRQVPLAVYRGFPGDDEEAQRRVIMAEVETPHGLLTVINGYFPQGENREHPV 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE------NDACFT 176
           K+  K  + +    +  Q L  +  +I  GD NI P   D       +          F 
Sbjct: 121 KFPAKEKFYQDLQNYLEQNLTPQSHVIIMGDMNISPTDLDIGIGENNQKRWLKTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R    +L+N G  D  R  +   +  +S++DY +  +  N+G+RID ++ S      
Sbjct: 181 PEERDWMDRLKNWGLVDTFRHLNPECNDQFSWFDYRSKGFDDNRGLRIDLLLASKPLMDR 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             +  ID K R   KPSDH PV    +I
Sbjct: 241 CIATGIDYKIREMEKPSDHAPVWAEFEI 268


>gi|264679401|ref|YP_003279308.1| exodeoxyribonuclease III Xth [Comamonas testosteroni CNB-2]
 gi|262209914|gb|ACY34012.1| exodeoxyribonuclease III Xth [Comamonas testosteroni CNB-2]
          Length = 260

 Score =  213 bits (541), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 91/260 (35%), Positives = 142/260 (54%), Gaps = 1/260 (0%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
            + +ATWNVNS+  R+  +  W+  N  D + LQE K  D  FP    +   Y   + GQ
Sbjct: 2   TMKIATWNVNSLSVRLPQVLDWLAANPVDALGLQELKLTDDKFPHMAFEEAGYKAVSHGQ 61

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K+YNGVA +++    ++V ++PG D D QAR I  T       +R+ N Y  +G    S 
Sbjct: 62  KTYNGVAWITRDTGRDVVRNIPGLD-DEQARIIATTIDSPNGEIRLINGYFVNGQEPGSE 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           K+  K+ W++    +   ++ L   L+  GD+N+ P+  D Y+P+  ++    T+E R  
Sbjct: 121 KFAYKMRWLQALHDWIQNQMTLHPRLVLVGDFNVAPEDRDSYDPVGLKDTIHHTVEERDH 180

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           FQ+L  +G +DA R        YS+WDY    + KN+G+RIDHI++S    S + +  +D
Sbjct: 181 FQRLLQLGLSDAFRMFEQPEKSYSWWDYRMLGFQKNRGLRIDHILVSEALKSKVSACSVD 240

Query: 243 TKPRGWTKPSDHTPVIVSLD 262
             PR   +PSDH PV+V+LD
Sbjct: 241 RAPRKNKQPSDHAPVVVTLD 260


>gi|54296672|ref|YP_123041.1| hypothetical protein lpp0703 [Legionella pneumophila str. Paris]
 gi|53750457|emb|CAH11851.1| hypothetical protein lpp0703 [Legionella pneumophila str. Paris]
          Length = 256

 Score =  213 bits (541), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 91/261 (34%), Positives = 151/261 (57%), Gaps = 5/261 (1%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +  +A+WNVNS++ R+  +  W++ +  D++ +QETK  D+NFP  +     YH+   GQ
Sbjct: 1   MFKLASWNVNSLKVRLEQVLQWLESSQVDLLAMQETKLTDENFPVASFTDKGYHVIFSGQ 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K+YNGVAI+S+Y   +I T +P  +   +              +R+ NLY+P+G  +TS 
Sbjct: 61  KTYNGVAIISRYPMTDIQTDIPELEDPQRRILAATVKG-----IRLINLYVPNGGELTSD 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           KY  K+ W+ +  RF   +L +   +   GD+NI P+  D ++P+ WE     +   RQ+
Sbjct: 116 KYQYKLDWLNKVTRFIENQLSIYSKVAVVGDFNIAPEDRDVHDPVEWEGCVLVSPAERQA 175

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F K+  +G  D+ R        +S+WDY A ++ +N+G+RIDH++LS E  +L   ++ID
Sbjct: 176 FMKILELGLHDSFRNFAQEEKAFSWWDYRAAAFRRNRGLRIDHVLLSHELNALCRQSKID 235

Query: 243 TKPRGWTKPSDHTPVIVSLDI 263
            +PR   +PSDH PV V L++
Sbjct: 236 KEPRKAERPSDHAPVWVELEL 256


>gi|307726281|ref|YP_003909494.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1003]
 gi|307586806|gb|ADN60203.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1003]
          Length = 269

 Score =  213 bits (541), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 108/271 (39%), Positives = 154/271 (56%), Gaps = 5/271 (1%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           M+ + +AT+N+N IR+R   L  W++   PDI+CLQE K  D  FP + L+  +YH    
Sbjct: 1   MATLRIATFNINGIRSRQAALVQWLEREAPDIVCLQELKAADSAFPADALRDADYHAIWH 60

Query: 61  GQKSYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
           GQ ++NGVAILSK   P+E    LPG + D  +R++EA        L +  LYLP+GNP 
Sbjct: 61  GQSAWNGVAILSKGEAPLESRRGLPGFEADTHSRYLEAAVGG----LLVCCLYLPNGNPQ 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K++ K+ W    +  A+  L+   P++ AGD+N++P   D YNP  W  DA    E 
Sbjct: 117 PGPKFEYKLKWFDHLIEHAANLLKSGHPVVLAGDFNVVPTDEDIYNPRSWLKDALLQPES 176

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R+ +Q+L   G+TD++R       +Y+FWDY+   W  N G+RIDHI+LSPE    L  A
Sbjct: 177 RERYQRLLAQGWTDSLRKHFGDERVYTFWDYFRRHWDTNSGLRIDHILLSPELAPRLRDA 236

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQ 270
            +D   RG    SDH P  V LD+   R+K 
Sbjct: 237 GVDRWVRGEAHASDHAPTWVELDMSARRRKT 267


>gi|241765066|ref|ZP_04763058.1| exodeoxyribonuclease III Xth [Acidovorax delafieldii 2AN]
 gi|241365303|gb|EER60125.1| exodeoxyribonuclease III Xth [Acidovorax delafieldii 2AN]
          Length = 258

 Score =  213 bits (541), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 96/259 (37%), Positives = 135/259 (52%), Gaps = 1/259 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+NS+  R+  + AW+  N  D +CLQE K  D  FPF  LQ   YH    GQK
Sbjct: 1   MQLATWNINSLSVRLPQVVAWLAANPVDALCLQELKLTDDKFPFAALQEAGYHAVAMGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAILS+    ++V ++PG D         AT    T  +R+ N Y  +G    S K
Sbjct: 61  TYNGVAILSRSPLRDVVRNIPGHDDQQARVI-AATMDTATGPVRLVNCYFVNGQEPGSEK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W++    +    L     L   GD+N+ P+  D Y+P+        T E R  F
Sbjct: 120 FAYKMRWLQALHDWLRTELAAHPRLALLGDFNVAPEDRDSYDPVGLRETIHHTTEERAHF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q L  +G TDA R        YS+WDY    + KN+G+RIDHI++S      + +  ID 
Sbjct: 180 QALLALGLTDAYRMFEQPEKAYSWWDYRMLGFQKNRGLRIDHILVSEALRGTVKACTIDR 239

Query: 244 KPRGWTKPSDHTPVIVSLD 262
            PR   +PSDH PV+ +LD
Sbjct: 240 APRKNPQPSDHAPVVATLD 258


>gi|163857201|ref|YP_001631499.1| putative exodeoxyribonuclease III [Bordetella petrii DSM 12804]
 gi|163260929|emb|CAP43231.1| putative exodeoxyribonuclease III [Bordetella petrii]
          Length = 260

 Score =  213 bits (541), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 93/260 (35%), Positives = 142/260 (54%), Gaps = 1/260 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS++ R+  +  W+  N  D +CLQE K  D+NFP +    L YH    GQK
Sbjct: 1   MKLATWNVNSLKVRLPQVLDWLAANPVDALCLQELKLTDENFPLDAFTQLGYHAAWAGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAILS+     +V ++PG D D Q R +  T       +R+ + Y P+G  + S K
Sbjct: 61  TYNGVAILSREPGAAMVRNIPGMD-DPQQRLLAVTLPSPAGDVRVISAYCPNGQALESDK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K++W ++   + +Q ++    L   GDYN+ P   D +NP  WE     +   R +F
Sbjct: 120 YAYKLNWFQQLRDWLAQEIQTYPRLALLGDYNVAPADEDVHNPAKWEGQVLVSEPERAAF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + L ++G  D+ R        +S+WDY   ++ +N G+RIDHI+LS        +  ID 
Sbjct: 180 RALLDLGLADSFRLFEQPEKSFSWWDYRQFAFRRNAGLRIDHILLSQPLVPHCVACVIDK 239

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
            PR   +PSDH PV+ +L +
Sbjct: 240 APRANEQPSDHAPVVATLQL 259


>gi|113477060|ref|YP_723121.1| exodeoxyribonuclease III [Trichodesmium erythraeum IMS101]
 gi|110168108|gb|ABG52648.1| Exodeoxyribonuclease III [Trichodesmium erythraeum IMS101]
          Length = 261

 Score =  212 bits (540), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 102/261 (39%), Positives = 138/261 (52%), Gaps = 3/261 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSIR R   +  W+K N+ DI+CLQETK  D++FP      L YHI   GQK
Sbjct: 1   MKIATWNVNSIRTRKQQVIEWLKANSVDILCLQETKVIDQDFPRSPFAELGYHIYVSGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLP---GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           SYNGVAI S+    +I +      GD         +   T     +RI NLY+P+G+ + 
Sbjct: 61  SYNGVAIFSRSPMEDISSGFAPILGDHKVGDFDIQKRLITGVINDVRILNLYVPNGSSVG 120

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
           S KYD K+ W+K    +    L+    L   GD+NI+P+  D Y+P   +N    +   R
Sbjct: 121 SEKYDYKLDWLKLLQEYVKIILDKSPNLCICGDFNIVPEDRDIYDPEGCKNSVGLSDLER 180

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           Q+ Q++  +G  DA R        YS+WDY A  + +N+G RIDH  LS   +       
Sbjct: 181 QALQEILKLGLVDAFRQFTTEGGHYSWWDYRAAGFRRNRGWRIDHHYLSLPLSQKATMCV 240

Query: 241 IDTKPRGWTKPSDHTPVIVSL 261
           ID  PR   KPSDH PVIV  
Sbjct: 241 IDKNPRELLKPSDHAPVIVEF 261


>gi|282864972|ref|ZP_06274026.1| exodeoxyribonuclease III Xth [Streptomyces sp. ACTE]
 gi|282560397|gb|EFB65945.1| exodeoxyribonuclease III Xth [Streptomyces sp. ACTE]
          Length = 259

 Score =  212 bits (540), Expect = 3e-53,   Method: Composition-based stats.
 Identities = 77/260 (29%), Positives = 128/260 (49%), Gaps = 1/260 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSI AR+  L AW++ +  D++CLQETK   + FP E L+   Y        
Sbjct: 1   MRIATWNVNSITARLPRLLAWLESSGTDVLCLQETKCTLEQFPAEALREAGYESAVNATG 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGV +LS+    ++VT LP        +   A        +R+ ++Y+P+G  +    
Sbjct: 61  RWNGVGLLSRVGLTDVVTGLPDGPEYEGVQEPRAVSAACGP-VRVWSVYVPNGREVAHDH 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W++   +  +       P    GD+NI P   D ++P ++E     T   R + 
Sbjct: 120 YAYKLRWLEALRKAVAADAAGPVPFAVLGDFNIAPTDDDVWDPSLFEGATHVTPAERDAL 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             L+  G +D +       H Y++WDY    + KN+G+RID +  +    + +  + +D 
Sbjct: 180 AALRAGGLSDVVPRPLKYDHPYTYWDYRQLGFPKNRGMRIDLVYGNAPFAAAVQDSYVDR 239

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
           + R     SDH PV+V LD+
Sbjct: 240 EERKGKGASDHAPVVVDLDV 259


>gi|298370009|ref|ZP_06981325.1| exodeoxyribonuclease III [Neisseria sp. oral taxon 014 str. F0314]
 gi|298281469|gb|EFI22958.1| exodeoxyribonuclease III [Neisseria sp. oral taxon 014 str. F0314]
          Length = 256

 Score =  212 bits (540), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 89/260 (34%), Positives = 138/260 (53%), Gaps = 4/260 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + TWNVNS+  R+  +  W+ ++ PDI+ LQE K +   FP   LQ + +H    GQK
Sbjct: 1   MKITTWNVNSLNVRLPQVQNWLADHQPDILVLQELKLDQDKFPAAALQMMGWHSVWSGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAI+S+ +P ++ T LP    D Q R I AT       +R+ N+Y  +G    S K
Sbjct: 61  TYNGVAIISRSEPQDVHTGLPAMPDDPQRRVIAATIGG----VRVINVYCVNGEAPDSPK 116

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K  W      F    +   E L+  GD+NI P   DCY+   W      T   R  F
Sbjct: 117 FQYKQQWFAALTEFVRDEMARYEKLVLLGDFNIAPTDDDCYDAEKWRGKILCTDSERGWF 176

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + L ++G TD++R  H     Y+++DY    + +  G+RIDH+++SP  +++L   ++D+
Sbjct: 177 KNLLDLGLTDSLRKIHPEGAFYTWFDYRGAMFQRGLGLRIDHLLVSPALSAVLKDVQVDS 236

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
             R   +PSDH PV    D+
Sbjct: 237 DARAQERPSDHAPVWAEFDL 256


>gi|17232798|ref|NP_489346.1| exodeoxyribonuclease III [Nostoc sp. PCC 7120]
 gi|17134445|dbj|BAB77005.1| exodeoxyribonuclease III [Nostoc sp. PCC 7120]
          Length = 260

 Score =  212 bits (540), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 98/260 (37%), Positives = 146/260 (56%), Gaps = 2/260 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSIR R+  +  W+K+N  D++CLQETK  D +FP    ++L YH    GQK
Sbjct: 1   MKIATWNVNSIRTRLEQVLDWLKQNPVDVLCLQETKVIDDDFPRSPFENLGYHSYISGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT--LRIGNLYLPHGNPITS 121
           +YNGVA++S+    ++ T       D++  + E    I      +RI NLY+P+G+ I S
Sbjct: 61  AYNGVALISQQPLTDVTTGFTPILPDIEPIWDEQKRVITGVIDGVRIVNLYVPNGSAIAS 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            KY+ K+ W+     +    L L+  +   GD+NI  +  D +  +  EN    +L  RQ
Sbjct: 121 EKYEYKLRWLTVLREYLRSLLLLQPAICICGDFNIALEDKDIHEKVKAENHIMASLAERQ 180

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           + + +  +GF DA R        +S+WDY A S+ +N+G RIDH  L+P   +   S  I
Sbjct: 181 ALRDVLELGFADAFRKFTTEGGHFSWWDYRAASFRRNQGWRIDHHYLTPVLYAQAKSCTI 240

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
           D  PR  T+PSDHTPVIV +
Sbjct: 241 DVSPRKLTQPSDHTPVIVEI 260


>gi|76810233|ref|YP_334150.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1710b]
 gi|76579686|gb|ABA49161.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1710b]
          Length = 322

 Score =  212 bits (540), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 87/258 (33%), Positives = 134/258 (51%), Gaps = 1/258 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+  R  ++  W+ +++ D++CLQE K  D+ FP E L++  Y     GQK
Sbjct: 65  MRIATWNVNSLNVRKQHVLDWLAQSDVDVLCLQELKIPDEKFPREALEAAGYRSWFAGQK 124

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAIL++       T +  +    +              +RI + Y P+G  + S K
Sbjct: 125 TYNGVAILARASLPFDETDIVRNIPGFEDAQQRLIAATIDG-VRIVSAYFPNGQALDSDK 183

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W+     +    L+    L   GDYNI P+  D ++P  WE     + + R  F
Sbjct: 184 FVYKMQWLDALQAWLKDELQRYPKLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHF 243

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            +L  +GF DA R        +++WDY   ++ +N G+RIDHI+LSP       S  +D 
Sbjct: 244 AQLVALGFVDAFRRFEQPEKTFTWWDYRMLAFRRNAGLRIDHILLSPALAETCTSCTVDR 303

Query: 244 KPRGWTKPSDHTPVIVSL 261
            PR W +PSDHTPV+  L
Sbjct: 304 VPRTWEQPSDHTPVVAQL 321


>gi|300868692|ref|ZP_07113303.1| exodeoxyribonuclease III [Oscillatoria sp. PCC 6506]
 gi|300333253|emb|CBN58495.1| exodeoxyribonuclease III [Oscillatoria sp. PCC 6506]
          Length = 261

 Score =  212 bits (540), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 96/261 (36%), Positives = 141/261 (54%), Gaps = 3/261 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSIR+R+  +  W++ N  D++CLQETK  D++FP +    + Y+    GQK
Sbjct: 1   MKIATWNVNSIRSRLEQVLEWLQANPVDVLCLQETKVIDQDFPLQPFLDIGYNFYISGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ---TLRIGNLYLPHGNPIT 120
           SYNGVAI S+    +I T              +    + T     +RI NLY+P+G+ + 
Sbjct: 61  SYNGVAIFSRLPMTDISTGFAPILGTDIVGEFDEQKRLITGIIADIRIVNLYIPNGSEVG 120

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
           S KY+ K++W+K    +    ++    L   GD+NI P   D +NP  ++N    +   R
Sbjct: 121 SEKYNYKLNWLKLLQEYLKIIIDKSPNLCVCGDFNIAPDDRDIHNPKAFKNQIMASPAER 180

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           Q+ Q++  +GF+DA R   D    +S+WDY    +  N+G RIDH  LS        S  
Sbjct: 181 QALQEIVALGFSDAFRIFTDEGGHFSWWDYRTGGFRHNRGWRIDHHYLSLSLCDRAKSCT 240

Query: 241 IDTKPRGWTKPSDHTPVIVSL 261
           ID  PR  TKPSDH PVIV +
Sbjct: 241 IDKTPRQLTKPSDHAPVIVEI 261


>gi|150376441|ref|YP_001313037.1| exodeoxyribonuclease III Xth [Sinorhizobium medicae WSM419]
 gi|150030988|gb|ABR63104.1| exodeoxyribonuclease III Xth [Sinorhizobium medicae WSM419]
          Length = 257

 Score =  212 bits (539), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 98/259 (37%), Positives = 151/259 (58%), Gaps = 5/259 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+N+N +  R+ +L  W+    PD++CLQE K  D  FP   +++  Y     GQ 
Sbjct: 1   MKIATFNINGVNKRLDHLLIWLAAAGPDVVCLQELKATDGQFPEAAIEAAGYGAVWLGQT 60

Query: 64  SYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           ++NGVAIL++  +P+   T LPGD  D Q+R+IEA        + I +LY P+GNP    
Sbjct: 61  AWNGVAILARGCEPVLTRTGLPGDPSDTQSRYIEAAVNG----ILIASLYAPNGNPQPGP 116

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           K+D K++W +R    A+  LE   P++ AGDYN++P+P D Y    ++ +A    E R +
Sbjct: 117 KFDYKLAWHQRLNLHAAALLEARVPVLLAGDYNVVPEPRDIYPTRSYDGNALVQPESRAA 176

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F+ L   G+ DA+R  H    L++FWDY  + W ++ G+R+DHI+LS +    L  A ID
Sbjct: 177 FKSLVEQGWLDALRKVHPQAQLFTFWDYRRNRWQRDAGLRLDHILLSGKLKRRLTGAGID 236

Query: 243 TKPRGWTKPSDHTPVIVSL 261
            + RG    SDH PV ++L
Sbjct: 237 REIRGLEGASDHAPVWITL 255


>gi|237745581|ref|ZP_04576061.1| exodeoxyribonuclease III [Oxalobacter formigenes HOxBLS]
 gi|229376932|gb|EEO27023.1| exodeoxyribonuclease III [Oxalobacter formigenes HOxBLS]
          Length = 255

 Score =  212 bits (539), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 95/260 (36%), Positives = 141/260 (54%), Gaps = 5/260 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS++ R+  +  W+ +N  D++CLQETK  D  FP   + +  Y     GQK
Sbjct: 1   MKIATWNVNSLKVRLPQVLQWLNDNPVDVLCLQETKLTDDKFPVMEIAAAGYQTVFTGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAILS+    +I+ + P    + Q        T     LR+   Y+P+G  + S K
Sbjct: 61  TYNGVAILSRQSAGDILKNNPFFPDEQQRIV-----TGTFGKLRVVCAYVPNGQAVDSDK 115

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  KI W+K    +  +  +    L   GDYNI P+  D Y+P  WE +   +   R +F
Sbjct: 116 YRYKIEWLKALHAWLLEEKKKYPYLALLGDYNIAPEDRDVYDPAAWEGNVLVSEPERAAF 175

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + L ++GF DA R        YS+WDY   ++ +N+G+R+DHI+LS        +  ID 
Sbjct: 176 RALLDIGFVDAFRLFSQPEKTYSWWDYRQLAFPRNRGLRLDHILLSENLAPHCTACTIDR 235

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
            PR W +PSDHTPVI  L++
Sbjct: 236 MPRKWKQPSDHTPVIAELEL 255


>gi|167581292|ref|ZP_02374166.1| exodeoxyribonuclease III [Burkholderia thailandensis TXDOH]
          Length = 258

 Score =  212 bits (539), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 87/258 (33%), Positives = 134/258 (51%), Gaps = 1/258 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+  R  ++  W+ +++ D++CLQE K  D+ FP E L++  Y     GQK
Sbjct: 1   MRIATWNVNSLNVRKQHVLDWLAQSDVDVLCLQELKIPDEKFPREALEAAGYRSWFAGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAIL++       T +  +    +              +RI + Y P+G  + S K
Sbjct: 61  TYNGVAILARASLPFDETDVVRNIPGFEDTQQRLIAATIDG-VRIVSAYFPNGQALDSDK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W+     +    L+    L   GDYNI P+  D ++P  WE     + + R  F
Sbjct: 120 FVYKMQWLDALQAWLKNELQRYPKLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            +L  +GF DA R        +++WDY   ++ +N G+RIDHI+LSP       S  +D 
Sbjct: 180 AQLVALGFVDAFRRFDQPEKTFTWWDYRMLAFRRNAGLRIDHILLSPALAETCTSCTVDR 239

Query: 244 KPRGWTKPSDHTPVIVSL 261
            PR W +PSDHTPV+  L
Sbjct: 240 APRAWEQPSDHTPVVAQL 257


>gi|294815857|ref|ZP_06774500.1| Exonuclease [Streptomyces clavuligerus ATCC 27064]
 gi|294328456|gb|EFG10099.1| Exonuclease [Streptomyces clavuligerus ATCC 27064]
          Length = 269

 Score =  212 bits (539), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 78/263 (29%), Positives = 130/263 (49%), Gaps = 1/263 (0%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           +S + +ATWNVNS+ AR+  L AW++ +  D++C+QETK  ++ FP E L+ + Y     
Sbjct: 8   LSSMRIATWNVNSVTARLPRLLAWLESSGTDVLCIQETKCAEEQFPAEELREIGYESAIH 67

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
               +NGVA++S+    E+V  LPG      A+   A        +R+ ++Y+P+G  +T
Sbjct: 68  ADGRWNGVALVSRVGLDEVVKGLPGGPAYDGAQEPRAISATCGP-VRLWSVYVPNGREVT 126

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
              Y  K+ W+       +       P    GDYNI P   D ++   +E     T   R
Sbjct: 127 HDHYAYKLEWLAALKEAVAADAAGPRPFAVLGDYNIAPADEDVWDRAAFEGSTHVTEPER 186

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            +   L+  G +D +       H +++WDY    + KN+G+RID +  +      +  + 
Sbjct: 187 AALAALRETGLSDVVPRPLKYDHPFTYWDYRQLCFPKNRGMRIDLVYGNGPFAGAVKDSY 246

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263
           +D + R     SDH PV+V LD+
Sbjct: 247 VDREERKGKGASDHAPVVVDLDV 269


>gi|83718841|ref|YP_442378.1| exodeoxyribonuclease III [Burkholderia thailandensis E264]
 gi|167619376|ref|ZP_02388007.1| exodeoxyribonuclease III [Burkholderia thailandensis Bt4]
 gi|257138580|ref|ZP_05586842.1| exodeoxyribonuclease III [Burkholderia thailandensis E264]
 gi|83652666|gb|ABC36729.1| exodeoxyribonuclease III [Burkholderia thailandensis E264]
          Length = 258

 Score =  212 bits (539), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 87/258 (33%), Positives = 134/258 (51%), Gaps = 1/258 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+  R  ++  W+ +++ D++CLQE K  D+ FP E L++  Y     GQK
Sbjct: 1   MRIATWNVNSLNVRKQHVLDWLAQSDVDVLCLQELKIPDEKFPREALEAAGYRSWFAGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAIL++       T +  +    +              +RI + Y P+G  + S K
Sbjct: 61  TYNGVAILARASLPFDETDVVRNIPGFEDTQQRLIAATIDG-VRIVSAYFPNGQALDSDK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W+     +    L+    L   GDYNI P+  D ++P  WE     + + R  F
Sbjct: 120 FVYKMQWLDALQAWLKNELQRYPKLALLGDYNIAPEDRDVHDPSKWEGQNLVSPQERAHF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            +L  +GF DA R        +++WDY   ++ +N G+RIDHI+LSP       S  +D 
Sbjct: 180 AQLVALGFVDAFRRFDQPEKTFTWWDYRMLAFRRNAGLRIDHILLSPALAETCTSCTVDR 239

Query: 244 KPRGWTKPSDHTPVIVSL 261
            PR W +PSDHTPV+  L
Sbjct: 240 APRAWEQPSDHTPVVAQL 257


>gi|87198182|ref|YP_495439.1| exodeoxyribonuclease III [Novosphingobium aromaticivorans DSM
           12444]
 gi|87133863|gb|ABD24605.1| Exodeoxyribonuclease III [Novosphingobium aromaticivorans DSM
           12444]
          Length = 259

 Score =  212 bits (539), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 102/260 (39%), Positives = 152/260 (58%), Gaps = 5/260 (1%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
            + VA++N+N I+AR+  L  W++E  P + CLQE KT+D+ FP E  + + Y     GQ
Sbjct: 2   TLKVASFNINGIKARLPRLLEWLEETRPSVACLQEIKTQDEGFPAEEFEKIGYRAIWHGQ 61

Query: 63  KSYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           K +NGVAIL+   QP+E+   L GD  D  +R++EA        LR+  +YLP+GNP   
Sbjct: 62  KGFNGVAILADGEQPVEVQRGLAGDPEDEHSRYLEADV----FGLRVVCIYLPNGNPQPG 117

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            K+D K+ W++R     +     E P +  GDYN+IP+  D ++     +DA    E R 
Sbjct: 118 PKFDYKLRWMERLRARMADIASEEVPALVIGDYNVIPEDKDTFSVKAMASDALMQPESRD 177

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           ++++L N G+TDAI   +    +++FWDY A +W ++ G RIDH +LSPE    L +A +
Sbjct: 178 AYRRLLNDGWTDAIDLFNPQGGVWTFWDYQAGAWQRDHGFRIDHALLSPELADRLVAAGV 237

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
           D   RG  K SDH PV V+L
Sbjct: 238 DKDYRGREKASDHAPVWVTL 257


>gi|52840886|ref|YP_094685.1| hypothetical protein lpg0649 [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|52627997|gb|AAU26738.1| exodeoxyribonuclease III [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
          Length = 263

 Score =  212 bits (539), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 92/261 (35%), Positives = 149/261 (57%), Gaps = 5/261 (1%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           V  +A+WNVNS++ R+  +  W++ +  D++ +QETK  D NFP  +     YH+   GQ
Sbjct: 8   VFKLASWNVNSLKVRLEQVLQWLESSQVDVLAMQETKLTDDNFPVASFIDKGYHVIFSGQ 67

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K+YNGVAI+S+Y   +I T +P  +   +              +R+ NLY+P+G  +TS 
Sbjct: 68  KTYNGVAIISRYPMTDIQTDIPELEDPQRRILAATVKG-----IRLINLYVPNGGELTSD 122

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           KY  K+ W+ +  RF    + +   +   GD+NI P+  D Y+P+ WE     +   RQ+
Sbjct: 123 KYQYKLDWLNKVTRFIQHEISIYSKVAVVGDFNIAPEDRDVYDPVEWEGCVLVSPPERQA 182

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F K+  +G  D+ R        +S+WDY A ++ +N+G+RIDH++LS E  +L   ++ID
Sbjct: 183 FMKILELGLHDSFRNFAQEEKAFSWWDYRAAAFRRNRGLRIDHVLLSHELNALCRQSKID 242

Query: 243 TKPRGWTKPSDHTPVIVSLDI 263
            +PR   +PSDH PV V L++
Sbjct: 243 KEPRKAERPSDHAPVWVELEL 263


>gi|297190955|ref|ZP_06908353.1| exonuclease [Streptomyces pristinaespiralis ATCC 25486]
 gi|197721867|gb|EDY65775.1| exonuclease [Streptomyces pristinaespiralis ATCC 25486]
          Length = 259

 Score =  212 bits (539), Expect = 5e-53,   Method: Composition-based stats.
 Identities = 76/260 (29%), Positives = 129/260 (49%), Gaps = 1/260 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSI AR+  L AW++ +  D++CLQETK  ++ FP   L+ L Y        
Sbjct: 1   MRIATWNVNSITARLPRLLAWLESSGTDVLCLQETKCTEEQFPAAQLRELGYESAVNASG 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVA++S+    ++V  LPG       +   A        +R+ ++Y+P+G  +    
Sbjct: 61  RWNGVAVISRVGLDDVVRGLPGAPDYEGVQEPRAISATCGP-VRVWSVYVPNGREVAHDH 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W++      +       P    GD+NI P   D ++P  ++     T   R + 
Sbjct: 120 YGYKLRWLEALSVAVTDDAAAGRPFAVLGDFNIAPTDDDVWDPSFFDGMTHVTPPERAAL 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + L+  G  D +       H +++WDY    + KN+G+RID +  +   T+ +  + +D 
Sbjct: 180 EALRKRGLADVVPRPLKYEHPFTYWDYRQLCFPKNRGMRIDLVYGNEPFTAAVKDSFVDR 239

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
           + R     SDH PV+V LD+
Sbjct: 240 EERKGKGASDHAPVVVDLDM 259


>gi|329911665|ref|ZP_08275588.1| Exodeoxyribonuclease III [Oxalobacteraceae bacterium IMCC9480]
 gi|327545815|gb|EGF30936.1| Exodeoxyribonuclease III [Oxalobacteraceae bacterium IMCC9480]
          Length = 256

 Score =  212 bits (539), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 91/260 (35%), Positives = 141/260 (54%), Gaps = 5/260 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS++ R+  +  W+ +N  D++CLQETKT D+ FP   +++  YH+   GQK
Sbjct: 1   MKLATWNVNSLKVRLPQVLQWLADNPIDVLCLQETKTIDEKFPQAEIEAAGYHVAFSGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAILSK    ++V + P    + Q              +R+   Y+P+G    S K
Sbjct: 61  TYNGVAILSKQPMTDVVRNNPHFADEQQRLIAATIDG-----VRVICAYIPNGQAPDSDK 115

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W+    ++ +  +         GDYNI P+  D ++P  W      +   R +F
Sbjct: 116 YQYKLRWLDGLQQWLALEMAAHPKFALLGDYNIAPEDRDVHDPAAWVGQILVSEPERAAF 175

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q++  +  TDA R       L+S+WDY    + +N G+RIDHI+LS E  +   S  ID 
Sbjct: 176 QRMIALELTDAFRLFEQADKLFSWWDYRQMGFRRNAGMRIDHILLSKELAAACTSCVIDK 235

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
            PR W +PSDHTPV+ ++ +
Sbjct: 236 VPRKWEQPSDHTPVVATIAL 255


>gi|296161285|ref|ZP_06844093.1| exodeoxyribonuclease III Xth [Burkholderia sp. Ch1-1]
 gi|295888443|gb|EFG68253.1| exodeoxyribonuclease III Xth [Burkholderia sp. Ch1-1]
          Length = 270

 Score =  212 bits (539), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 103/272 (37%), Positives = 155/272 (56%), Gaps = 5/272 (1%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           M+ + +AT+N+N IR+R+  L  W++   PDI+CLQE K  D  FP E L+   Y     
Sbjct: 1   MARLRIATFNINGIRSRLPALLQWLEREAPDIVCLQELKAADSAFPVEELRDAGYGAIWQ 60

Query: 61  GQKSYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
           GQ ++NGVAIL+K   P+E    LPG + D  +R++EA        + +  LYLP+GNP 
Sbjct: 61  GQSAWNGVAILAKGEAPLESRRGLPGFEDDTHSRYLEAAVGG----IVVACLYLPNGNPQ 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K+D K++W    +R A++  +   P++ AGD+N++P   D YNP  W  DA    E 
Sbjct: 117 PGPKFDYKLAWFGHLIRHAAKLYKSGHPVVLAGDFNVVPTDEDIYNPRSWLKDALLQPES 176

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R+ +++L   G+TDA+R       +Y+FWDY+   W  N G+RIDH++LS +    L  A
Sbjct: 177 RERYRQLLAQGWTDALRTHFGAERVYTFWDYFRRHWETNSGLRIDHVLLSADLAPRLRDA 236

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271
            +D   RG    SDH P  V L++   R+K+ 
Sbjct: 237 GVDRWVRGEPHASDHAPAWVELEVGAGRRKKS 268


>gi|54293632|ref|YP_126047.1| hypothetical protein lpl0685 [Legionella pneumophila str. Lens]
 gi|53753464|emb|CAH14919.1| hypothetical protein lpl0685 [Legionella pneumophila str. Lens]
          Length = 256

 Score =  211 bits (538), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 90/261 (34%), Positives = 150/261 (57%), Gaps = 5/261 (1%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +  +A+WNVNS++ R+  +  W++ +  D++ +QETK  D+NFP  +     YH+   GQ
Sbjct: 1   MFKLASWNVNSLKVRLEQVLQWLESSQVDVLAMQETKLTDENFPVVSFTDKGYHVIFSGQ 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K+YNGVAI+S+Y   +I T +P  +   +              +R+ NLY+P+G  +TS 
Sbjct: 61  KTYNGVAIISRYPMTDIQTDIPELEDPQRRILAATVKG-----IRLINLYVPNGGELTSD 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           KY  K+ W+ +  RF    + +   +   GD+NI P+  D ++P+ WE     +   RQ+
Sbjct: 116 KYQYKLDWLNKVTRFIQHEISIYSKVAVVGDFNIAPEDRDVHDPVEWEGCVLVSPPERQA 175

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F K+  +G  D+ R        +S+WDY A ++ +N+G+RIDH++LS E  +L   ++ID
Sbjct: 176 FMKILELGLHDSFRNFAQEEKAFSWWDYRAAAFRRNRGLRIDHVLLSHELNALCRQSKID 235

Query: 243 TKPRGWTKPSDHTPVIVSLDI 263
            +PR   +PSDH PV V L++
Sbjct: 236 KEPRKAERPSDHAPVWVELEL 256


>gi|121999062|ref|YP_001003849.1| exodeoxyribonuclease III Xth [Halorhodospira halophila SL1]
 gi|121590467|gb|ABM63047.1| Exodeoxyribonuclease III [Halorhodospira halophila SL1]
          Length = 267

 Score =  211 bits (538), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 91/259 (35%), Positives = 143/259 (55%), Gaps = 5/259 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A+WNVNS++ R+  + AW +   P +I LQETK  D  FP + LQ   Y     GQ+
Sbjct: 1   MKIASWNVNSLKVRLPQVKAWAQSATPSVIALQETKVPDDQFPLKALQEAGYRAAFAGQR 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVA+L++  P ++VT LPG     +              +R+ NLY+P+G  + S K
Sbjct: 61  TYNGVAVLARSAPQDVVTDLPGFADTQRRVLACTVSG-----VRVINLYVPNGQEVGSEK 115

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W++    + ++ LE  E ++  GD+NI PQ  D ++P  WE    F+   R + 
Sbjct: 116 YGYKLRWLEALHHWVARELEAHEHVVVLGDFNIAPQAADVHDPAEWEGKVLFSQSERDAL 175

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + L N+G  D  R        +S+WDY  +S+ +N+G+RID I+ S        ++R+D 
Sbjct: 176 RGLLNLGLVDTFRLFEQPEGQFSWWDYRVNSFKRNRGLRIDLILASSALARACVASRVDV 235

Query: 244 KPRGWTKPSDHTPVIVSLD 262
           +PR W +PSDH PV+   D
Sbjct: 236 EPRRWERPSDHAPVVAEFD 254


>gi|171057931|ref|YP_001790280.1| exodeoxyribonuclease III Xth [Leptothrix cholodnii SP-6]
 gi|170775376|gb|ACB33515.1| exodeoxyribonuclease III Xth [Leptothrix cholodnii SP-6]
          Length = 254

 Score =  211 bits (538), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 88/258 (34%), Positives = 130/258 (50%), Gaps = 5/258 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+  R+  L  W+    PD + LQETK  D  FP   L +  YH    GQK
Sbjct: 1   MKLATWNVNSLSVRLPQLLDWLVSAQPDALVLQETKLTDDKFPAAELLAAGYHAVWHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVA+LS+   +++V ++P  D                  +R+   Y P+G    S K
Sbjct: 61  TYNGVALLSRTPAVDVVRNIPALDDPQARVI-----AGTVDGVRVIGGYFPNGQAPDSEK 115

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W+     +    L     L+  GD+NI P+  D Y+P+ W      T E R  F
Sbjct: 116 FVYKMGWLTALEAWLQTELAAHTQLVLMGDFNIAPEDRDVYDPVAWAGQIHCTPEERAHF 175

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q L  +G  DA R        +S+WDY   ++ KN+G+RIDH+++     + + + +ID 
Sbjct: 176 QALVGLGLVDAFRLFEQPPKSWSWWDYRNLAFRKNQGLRIDHVLVGEALKARVTACQIDK 235

Query: 244 KPRGWTKPSDHTPVIVSL 261
            PR   +PSDH PV V L
Sbjct: 236 APRKNERPSDHAPVWVEL 253


>gi|255535312|ref|YP_003095683.1| Exodeoxyribonuclease III [Flavobacteriaceae bacterium 3519-10]
 gi|255341508|gb|ACU07621.1| Exodeoxyribonuclease III [Flavobacteriaceae bacterium 3519-10]
          Length = 301

 Score =  211 bits (538), Expect = 6e-53,   Method: Composition-based stats.
 Identities = 95/262 (36%), Positives = 135/262 (51%), Gaps = 3/262 (1%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
              + +AT+NVN I  R+  L  W+ E  PDI CLQE K     FP   +    Y     
Sbjct: 43  FEPMKIATYNVNGINGRLPVLLRWLNEKQPDIACLQELKAPQDKFPEAAIAEAGYEAVWV 102

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           GQKS+NGVA+LSK     +           ++        +    L I  LYLP+GNP  
Sbjct: 103 GQKSWNGVAVLSKIGTPTVSR---TSLPGDESDEASRYLEVKIADLIIACLYLPNGNPAP 159

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             K+D K+ W  R    A   +   + ++  GD+N++P   D Y P  + NDA F  +V+
Sbjct: 160 GPKFDYKMQWFSRLDAHAEMLITSGKKVLLIGDFNVMPTEKDVYKPEKYINDALFHPDVQ 219

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            +F  L   G+TDAIR  +    +Y+FWDY+ +++ +N G+RIDH +LS E    L  A 
Sbjct: 220 AAFHNLTEQGWTDAIRYLYPDETIYTFWDYFRNAYQRNAGMRIDHFLLSAEVLPQLKKAG 279

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           +DT  RGW K SDH PV + L+
Sbjct: 280 VDTDVRGWEKSSDHGPVWIELE 301


>gi|302557371|ref|ZP_07309713.1| exodeoxyribonuclease III [Streptomyces griseoflavus Tu4000]
 gi|302474989|gb|EFL38082.1| exodeoxyribonuclease III [Streptomyces griseoflavus Tu4000]
          Length = 259

 Score =  211 bits (538), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 80/260 (30%), Positives = 125/260 (48%), Gaps = 1/260 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSI AR+  L AW++ +  D++CLQE K  +  FP E L+ L Y        
Sbjct: 1   MRIATWNVNSITARLPRLLAWLESSGTDVLCLQEAKVAEDQFPAEQLRELGYESAVHATG 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVA+LS+    ++V  LPGD     +    A        +R+ ++Y+P+G  +    
Sbjct: 61  RWNGVAVLSRVGLADVVKGLPGDPGYDGSVEPRAIAATCGP-VRVWSVYVPNGREVEHPH 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W +      S       P    GDYN+ P   D Y+   +E     T   R + 
Sbjct: 120 YAYKLQWFEALTAAVSGDAAGGRPFAVLGDYNVAPTDDDVYDRSAFEGSTHVTPAERAAL 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             L+  G +D +       H Y++WDY    + KN+G+RID +  +      +  + +D 
Sbjct: 180 ASLREAGLSDVVPRPLKYEHPYTYWDYRQLCFPKNRGMRIDLVYGNAPFAKAVTDSYVDR 239

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
           + R     SDH PV+V LD+
Sbjct: 240 EERKGKGASDHAPVVVDLDV 259


>gi|307609446|emb|CBW98940.1| hypothetical protein LPW_07251 [Legionella pneumophila 130b]
          Length = 256

 Score =  211 bits (538), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 90/261 (34%), Positives = 149/261 (57%), Gaps = 5/261 (1%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +  +A+WNVNS++ R+  +  W++ +  D++ +QETK  D+NFP  +     YH+   GQ
Sbjct: 1   MFKLASWNVNSLKVRLEQVLQWLESSQVDVLAMQETKLTDENFPVVSFTDKGYHVIFSGQ 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K+YNGVAI+S+Y   +I T +P  +   +              +R+ NLY+P+G  +TS 
Sbjct: 61  KTYNGVAIISRYPMTDIQTDIPELEDPQRRILAATVKG-----IRLINLYVPNGGELTSD 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           KY  K+ W+ +  RF    + +   +   GD+NI P   D ++P+ WE     +   RQ+
Sbjct: 116 KYQYKLDWLNKVTRFIQHEISIYSKVAVVGDFNIAPDDRDVHDPVEWEGCVLVSPPERQA 175

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F K+  +G  D+ R        +S+WDY A ++ +N+G+RIDH++LS E  +L   ++ID
Sbjct: 176 FMKILELGLHDSFRNFAQEEKAFSWWDYRAAAFRRNRGLRIDHVLLSHELNALCRQSKID 235

Query: 243 TKPRGWTKPSDHTPVIVSLDI 263
            +PR   +PSDH PV V L++
Sbjct: 236 KEPRKAERPSDHAPVWVELEL 256


>gi|75908773|ref|YP_323069.1| exodeoxyribonuclease III [Anabaena variabilis ATCC 29413]
 gi|75702498|gb|ABA22174.1| Exodeoxyribonuclease III [Anabaena variabilis ATCC 29413]
          Length = 260

 Score =  211 bits (538), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 98/260 (37%), Positives = 145/260 (55%), Gaps = 2/260 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSIR R+  +  W+K+N  D++CLQETK  D +FP    ++L YH    GQK
Sbjct: 1   MKIATWNVNSIRTRLEQVVDWLKQNPVDVLCLQETKVIDHDFPRSPFENLGYHSYISGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT--LRIGNLYLPHGNPITS 121
           +YNGVA++S+ Q  ++ T       D++  + E    I      +RI NLY+P+G+ I S
Sbjct: 61  AYNGVALISQQQLTDVTTGFTPILPDIEPIWDEQKRVITGVIDGVRIVNLYVPNGSAIAS 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            KY+ K+ W+     +    L L+  +   GD+NI  +  D +  +  EN    +   RQ
Sbjct: 121 EKYEYKLRWLTVLKEYLRSLLLLQPSICICGDFNIALEDKDIHEKVKAENHIMASPAERQ 180

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           + + +  +GF DA R        +S+WDY A S+ +N+G RIDH  L+P       S  I
Sbjct: 181 ALRDVLELGFADAFRKFTTEGGHFSWWDYRAASFRRNQGWRIDHHYLTPVLYEQAKSCII 240

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
           D  PR  T+PSDHTPVIV +
Sbjct: 241 DVSPRKLTQPSDHTPVIVEI 260


>gi|119491403|ref|ZP_01623422.1| Exodeoxyribonuclease III xth [Lyngbya sp. PCC 8106]
 gi|119453398|gb|EAW34561.1| Exodeoxyribonuclease III xth [Lyngbya sp. PCC 8106]
          Length = 261

 Score =  211 bits (538), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 95/261 (36%), Positives = 137/261 (52%), Gaps = 3/261 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSIR R   + AW++ N  D++CLQETK  D +FP    + L YH+   GQK
Sbjct: 1   MKIATWNVNSIRTRKEQVLAWLQANPVDLLCLQETKVIDPDFPRSPFEDLGYHLYVSGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT---QTLRIGNLYLPHGNPIT 120
           +YNGVAI S+    ++             +  +    +       +R+ NLY+P+G  + 
Sbjct: 61  AYNGVAIFSRQPLEDVSLGFTAILAQNTVQTFDEQKRVIAGTIDGIRVINLYVPNGASVG 120

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
           S KY  K+SW+K    +  + LE    +   GD+NI  +  D +NP   EN    +   R
Sbjct: 121 SEKYLYKLSWLKLLKEYLQKTLEKNPNICVCGDFNIALEDRDIHNPKGRENHIMASDAER 180

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           Q+ +++  +G  DA R  +     +S+WDY A S+ +NKG RIDH  L+        S  
Sbjct: 181 QALKEILELGLADAFRKFNSESEQFSWWDYRAASFPRNKGWRIDHHYLTSSLYEKAKSCI 240

Query: 241 IDTKPRGWTKPSDHTPVIVSL 261
           ID  PR   KPSDHTPVIV  
Sbjct: 241 IDKTPRKLEKPSDHTPVIVEF 261


>gi|327399082|ref|YP_004339951.1| exodeoxyribonuclease III Xth [Hippea maritima DSM 10411]
 gi|327181711|gb|AEA33892.1| exodeoxyribonuclease III Xth [Hippea maritima DSM 10411]
          Length = 258

 Score =  211 bits (538), Expect = 7e-53,   Method: Composition-based stats.
 Identities = 88/259 (33%), Positives = 139/259 (53%), Gaps = 6/259 (2%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64
            V +WNVNSIRAR+  +  ++K N PD++C+QETK E+  FP E  + L Y++ T GQK 
Sbjct: 4   KVVSWNVNSIRARLELVLDFLKANQPDVLCMQETKVENVLFPKEAFEELGYNVATAGQKR 63

Query: 65  YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124
           +NGVA +SK    +I T     + D +   +          + I NLY P+G    + ++
Sbjct: 64  FNGVATVSKLNLEDIKTDFFDAEKDHKRSLL-----TKINDITIINLYFPNGQAPDTEQF 118

Query: 125 DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ 184
             K+++I     F S+   +E+ LI  GD+N+  + +D Y+    E    F  E R++ +
Sbjct: 119 QYKLNFIYELKSFLSKHYSIEDKLIILGDFNVAMEENDVYDVKQMEGKIGFHPEERKALK 178

Query: 185 KLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK 244
           +L + GF D  R  +     +S+WDY A S+ K++G+RID+I  +P          ID  
Sbjct: 179 ELYSWGFVDLFRKFNK-EKAFSWWDYRAASFWKDRGLRIDYIWSTPTLADKCKDCFIDKS 237

Query: 245 PRGWTKPSDHTPVIVSLDI 263
            R   KPSDH PV+   ++
Sbjct: 238 YRRKKKPSDHAPVVAVFEL 256


>gi|78778870|ref|YP_396982.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9312]
 gi|78712369|gb|ABB49546.1| Exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9312]
          Length = 281

 Score =  211 bits (537), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 93/266 (34%), Positives = 146/266 (54%), Gaps = 4/266 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSIR R+  +  W+ + NPDI+CLQETK  D +FPFE  + L Y +E  GQK
Sbjct: 1   MLIATWNVNSIRTRLSQIIDWMNQVNPDILCLQETKVMDNSFPFEPFEKLGYSVEVYGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT----INTQTLRIGNLYLPHGNPI 119
           +YNGVAI+SK +   +     G     Q   I          +   ++I N+Y+P+G+ +
Sbjct: 61  AYNGVAIISKIKAENVKKGFYGCSDSDQNAEIFLDQKRLISADINGIKIINVYVPNGSSL 120

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
            S K++ KI+W+     +  ++ +  E +   GD+N+ P   D Y+P  +E     +   
Sbjct: 121 ESNKFEYKINWLSSLASYLDEQEKKGELICLMGDFNVAPSNLDIYDPKKYEGGIMASEIE 180

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R +   +      D+ R        +S+WDY  +++  NKG RIDHI +S E +S L S 
Sbjct: 181 RNALNNVLKERLIDSFRIFEKNPGHWSWWDYRNNAYELNKGWRIDHIYISKELSSKLKSC 240

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPE 265
            ID+ PR   +PSDH PV++ L++ +
Sbjct: 241 VIDSSPRANLRPSDHAPVMIDLNLND 266


>gi|258653319|ref|YP_003202475.1| exodeoxyribonuclease III Xth [Nakamurella multipartita DSM 44233]
 gi|258556544|gb|ACV79486.1| exodeoxyribonuclease III Xth [Nakamurella multipartita DSM 44233]
          Length = 264

 Score =  211 bits (537), Expect = 8e-53,   Method: Composition-based stats.
 Identities = 84/262 (32%), Positives = 139/262 (53%), Gaps = 3/262 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+NSIRAR   + AW++ ++ D++ +QETK +D  FP E+ + L Y +   G  
Sbjct: 1   MRIATWNINSIRARHDRVLAWLERSDVDVLAIQETKIDDARFPVESFERLGYRVAHHGTN 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT-LRIGNLYLPHGNPITST 122
            +NGVAI S+    ++   +P      +   +EA         +R+ +LY+P+G  +   
Sbjct: 61  QWNGVAIASRVGLDDVQVGVPDLPAFGEDPAVEARSLGALCGGVRVWSLYVPNGRAVDDP 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEP--LIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
            Y  K+ W+     +A+++L  E    ++  GD+NI P   D ++   ++     T   R
Sbjct: 121 HYHYKLHWLAVLRDYAAKQLADEPHLPMLLCGDFNIAPTDDDIWSVEYYQGSTHVTGPER 180

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           Q+F  L + GFTD +R  H    +Y++WDY   S+ K +G+RID  + SP   + +  A+
Sbjct: 181 QAFANLTDAGFTDVVRPFHPGPGVYTYWDYTRLSFPKRRGMRIDFALASPALAARVTDAQ 240

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           ID + R     SDH PVIV   
Sbjct: 241 IDREERKGKGSSDHAPVIVEFK 262


>gi|268318163|ref|YP_003291882.1| exodeoxyribonuclease III Xth [Rhodothermus marinus DSM 4252]
 gi|262335697|gb|ACY49494.1| exodeoxyribonuclease III Xth [Rhodothermus marinus DSM 4252]
          Length = 254

 Score =  211 bits (537), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 89/260 (34%), Positives = 138/260 (53%), Gaps = 6/260 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + VATWNVNSIRAR+  +  W+    PDI+CLQETK  D +FP +  +   Y +   GQK
Sbjct: 1   MIVATWNVNSIRARLERVLQWLDRTEPDIVCLQETKVVDADFPADPFRERGYELAVFGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAILS+    ++   L G+      +            L + ++Y+P+G  + S  
Sbjct: 61  AYNGVAILSRLPLQDVRRGLDGEQEARFLQAR------CGDRLVVCSVYVPNGGTVGSEA 114

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +D K+ W  R   +  +    E PL+ AGD+N+ P+P D   P  W +   F    R +F
Sbjct: 115 WDYKLRWFDRLRAYLERAASPETPLLLAGDFNVAPEPRDVAFPEAWADSVLFHEAARAAF 174

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           +KL + G  D IR  H+    +++WDY   ++ +  G+RIDH++ +P   +    A +  
Sbjct: 175 RKLIDWGLVDLIRLHHEGPGPFTWWDYRNLAFPRGDGLRIDHLLATPPVAACCTEAGVHR 234

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
           + R   KPSDH PV   L++
Sbjct: 235 EERKGKKPSDHAPVWARLNL 254


>gi|294083994|ref|YP_003550751.1| exodeoxyribonuclease III [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292663566|gb|ADE38667.1| exodeoxyribonuclease III [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 256

 Score =  211 bits (537), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 119/258 (46%), Positives = 169/258 (65%), Gaps = 4/258 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A+WNVNS +AR+ ++  W+K +N DI+ +QE K++D+NFP +    L +HI   GQK
Sbjct: 1   MRIASWNVNSAKARLDHITGWLKADNADILMMQEIKSQDENFPHDAFTDLGWHIAVHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           SYNGVAI S++   +++  LPGDD D QAR+IEAT       +RIGN+YLP+GNP    K
Sbjct: 61  SYNGVAIASRFPIDDVMNGLPGDDADEQARYIEATING----VRIGNIYLPNGNPAPGPK 116

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +D K+SW+ R    A + L  E P++  GDYN++PQ  DCY+P  W  DA    + R +F
Sbjct: 117 FDYKLSWMARLYDRAVELLATEMPVVLGGDYNVLPQDVDCYDPAAWVGDALTHDDSRAAF 176

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            K+ + G+ DA+RA H +   Y++WDY A +W ++ G+RIDH++LSPEA   L    ID 
Sbjct: 177 FKILHAGYMDALRALHPSGVHYTYWDYQAGAWQRDNGLRIDHLLLSPEAGDRLTDVGIDR 236

Query: 244 KPRGWTKPSDHTPVIVSL 261
            PRG  KPSDHTP+   L
Sbjct: 237 APRGLEKPSDHTPIWCQL 254


>gi|326801889|ref|YP_004319708.1| exodeoxyribonuclease III Xth [Sphingobacterium sp. 21]
 gi|326552653|gb|ADZ81038.1| exodeoxyribonuclease III Xth [Sphingobacterium sp. 21]
          Length = 259

 Score =  211 bits (537), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 101/262 (38%), Positives = 152/262 (58%), Gaps = 4/262 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+NVN +  R+  L  W++E  PD++CLQE K   + FP + ++   Y++   GQK
Sbjct: 1   MKIATYNVNGVNGRLPVLLRWLEEAKPDVVCLQELKAPQEKFPEQAIREAGYNVIWHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           S+NGVAIL+++  I     +   D +            +   + IG LYLP+GNP+   K
Sbjct: 61  SWNGVAILARHLDIIEFGRVLPGDPEDTHS---RYIEASINNIHIGCLYLPNGNPVPGPK 117

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +D K+ W++R    A + L    P+I  GDYN+IP   D Y P  W +DA F  EVR +F
Sbjct: 118 FDYKLKWLQRLANHAQELLNKNIPVILTGDYNVIPTELDVYKPERWVDDALFRPEVRMAF 177

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             L   G+TDAIR  +    +Y+FWDY+ +++ ++ G+RIDH +LSP+    L +A +D 
Sbjct: 178 SDLMTQGWTDAIRQLYPNERIYTFWDYFRNAYGRDAGLRIDHFLLSPQLVEKLVAAGVDR 237

Query: 244 KPRGWTKPSDHTPVIVSL-DIP 264
             RGW K SDH PV + L D+P
Sbjct: 238 YVRGWEKTSDHAPVWIELRDLP 259


>gi|226361308|ref|YP_002779086.1| exodeoxyribonuclease III [Rhodococcus opacus B4]
 gi|226239793|dbj|BAH50141.1| putative exodeoxyribonuclease III [Rhodococcus opacus B4]
          Length = 267

 Score =  211 bits (536), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 77/265 (29%), Positives = 129/265 (48%), Gaps = 7/265 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+RAR   +  W++ ++ D++ +QETK +D+ FP+E  + L Y +   G  
Sbjct: 1   MRIATWNVNSVRARTDRILDWLQRSDVDVLAIQETKCKDEQFPYERFRELGYEVAHVGLS 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-----TQTLRIGNLYLPHGNP 118
            +NGVAI S+    ++     G     +   +               +R+ +LY+P+G  
Sbjct: 61  QWNGVAIASRVGLDDVQIGFEGQPGFHKDPEVAPAQEARAIGATCNGVRVWSLYVPNGRE 120

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIF--AGDYNIIPQPHDCYNPIIWENDACFT 176
           +    Y  K+ W+ +    A   L+          GD+N+ P   D ++P ++E     +
Sbjct: 121 LADPHYTYKLEWLAKLHTDAVGWLDRNPDAQIALVGDWNVAPTDEDVWDPALFEGKTHTS 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
           +  R++FQ     GF D +R       +Y++WDY    + K +G+RID ++ SP     +
Sbjct: 181 VPEREAFQAFVESGFADVVRPHTPGPGVYTYWDYTQLRFPKKQGMRIDFVLGSPALAGRV 240

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSL 261
             A ID   R     SDH PVIV L
Sbjct: 241 DKAEIDRNERKGKGASDHAPVIVDL 265


>gi|111019171|ref|YP_702143.1| DNA-(apurinic or apyrimidinic site) lyase [Rhodococcus jostii RHA1]
 gi|110818701|gb|ABG93985.1| probable DNA-(apurinic or apyrimidinic site) lyase [Rhodococcus
           jostii RHA1]
          Length = 270

 Score =  211 bits (536), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 79/268 (29%), Positives = 128/268 (47%), Gaps = 7/268 (2%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           M+ V +ATWNVNS+RAR   +  W++ ++ D++ +QETK +D+ FP+E  + L Y +   
Sbjct: 1   MAAVRIATWNVNSVRARTDRILDWLQRSDVDVLAMQETKCKDEQFPYERFRELGYEVAHV 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-----TQTLRIGNLYLPH 115
           G   +NGVAI S+    ++           +   +               +RI +LY+P+
Sbjct: 61  GLSQWNGVAIASRVGLEDVQIGFEDQPGFHKDPEVAPAQEARAIGATCNGVRIWSLYVPN 120

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIF--AGDYNIIPQPHDCYNPIIWENDA 173
           G  +    Y  K+ W+ +    A   L           GD+N+ P   D ++P ++E   
Sbjct: 121 GRELADPHYTYKLDWLAKLHTDAVGWLGQNPDAQIALVGDWNVAPTDEDVWDPALFEGKT 180

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
             +   R++FQ     GF D +R       +Y++WDY    + K +G+RID ++ SP   
Sbjct: 181 HTSAPEREAFQAFVESGFADVVRPHTPGPGVYTYWDYTQLRFPKKQGMRIDFVLGSPALA 240

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSL 261
             +  A ID   R     SDH PVIV L
Sbjct: 241 GRVDKAEIDRNERKGKGASDHAPVIVDL 268


>gi|299530483|ref|ZP_07043903.1| exodeoxyribonuclease III Xth [Comamonas testosteroni S44]
 gi|298721459|gb|EFI62396.1| exodeoxyribonuclease III Xth [Comamonas testosteroni S44]
          Length = 258

 Score =  211 bits (536), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 90/259 (34%), Positives = 142/259 (54%), Gaps = 1/259 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+  R+  +  W+  N  D + LQE K  D  FP    +   Y   + GQK
Sbjct: 1   MKIATWNVNSLSVRLPQVLDWLAANPVDALGLQELKLTDDKFPHMAFEEAGYKAVSHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVA +++    ++V ++PG D D QAR I  T       +R+ N Y  +G    S K
Sbjct: 61  TYNGVAWITRDTGRDVVRNIPGLD-DEQARIIATTIDSPNGEIRLINGYFVNGQEPGSEK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W++    +   ++ L   L+  GD+N+ P+  D Y+P+  ++    T+E R  F
Sbjct: 120 FAYKMRWLQALHDWIQNQMTLHPRLVLVGDFNVAPEDRDSYDPVGLKDTIHHTVEERDHF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q+L  +G +DA R        YS+WDY    + KN+G+RIDHI++S    S + +  +D 
Sbjct: 180 QRLLQLGLSDAFRMFEQPEKSYSWWDYRMLGFQKNRGLRIDHILVSEALKSKVSACSVDR 239

Query: 244 KPRGWTKPSDHTPVIVSLD 262
            PR   +PSDH PV+V+L+
Sbjct: 240 APRKNKQPSDHAPVVVTLN 258


>gi|256824430|ref|YP_003148390.1| Exodeoxyribonuclease III [Kytococcus sedentarius DSM 20547]
 gi|256687823|gb|ACV05625.1| Exodeoxyribonuclease III [Kytococcus sedentarius DSM 20547]
          Length = 281

 Score =  211 bits (536), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 82/282 (29%), Positives = 128/282 (45%), Gaps = 13/282 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+RAR+  +A +++ +  D++ LQETK +D  FP E    L Y I   G  
Sbjct: 1   MRIATWNVNSLRARLDRVAEFLQRHEVDVLALQETKVQDDKFPAERFAELGYEIAFHGLN 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT------------FTINTQTLRIGNL 111
            +NGVAI S+    ++    P          +EA                 T  +R+ +L
Sbjct: 61  QWNGVAIASRVGLEDVTVAFPDQPGWGDEPVVEARALGATVGGQPRADGSATPRIRLWSL 120

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
           Y+P+G  I     D K+ W+      A      + PL   GD+N+ P   D ++   +E 
Sbjct: 121 YVPNGREIGHPHMDYKVGWLDTLAGHAGTWAGEDLPLALVGDFNVAPLDTDVWDIAAFEG 180

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
               T   R +FQ   + G  D +R  H     +++WDY    + K +G+RID ++ S  
Sbjct: 181 HTHVTEPERAAFQGFLDAGLVDVVR-PHTEPDTFTYWDYQQLRFPKRQGMRIDFVLGSQP 239

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDS 273
               +  A +D + R     SDH PV+V L I  P   +   
Sbjct: 240 FADRVTGAFVDREERKGKGASDHAPVVVDLAIDLPTGTRDTP 281


>gi|317492293|ref|ZP_07950722.1| exodeoxyribonuclease III [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316919632|gb|EFV40962.1| exodeoxyribonuclease III [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 269

 Score =  211 bits (536), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 83/268 (30%), Positives = 123/268 (45%), Gaps = 8/268 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A I ++ PD+I LQETK  D  FP   L+ L YHI   GQK
Sbjct: 1   MKFISFNINGLRARPHQLEAIIAKHQPDVIGLQETKVHDDMFPLADLEHLGYHIFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            + GVA+L+K QP+ +    P D+ D Q R I A     T  L + N Y P G       
Sbjct: 61  GHYGVALLTKEQPLAVRKGFPTDEEDAQRRIIMADIATPTGVLTVINGYFPQGESRDHPI 120

Query: 124 -YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACFT 176
            +  K  + +    +          +I  GD NI P   D           +      F 
Sbjct: 121 KFPAKTKFYQDLQNYLETEQTPAGQVIVMGDVNISPTDSDIGIGEENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+   +L+N G  D  R  +   +  +S++DY +  + +N+G+RID ++ S      
Sbjct: 181 PEEREWMDRLKNWGLIDTYRQANPERNDQFSWFDYRSKGFDENRGLRIDLVLASQSLAER 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                ID + RG  KPSDH P+     +
Sbjct: 241 CIDTGIDYEIRGMEKPSDHAPIWADFKL 268


>gi|302555181|ref|ZP_07307523.1| exodeoxyribonuclease III [Streptomyces viridochromogenes DSM 40736]
 gi|302472799|gb|EFL35892.1| exodeoxyribonuclease III [Streptomyces viridochromogenes DSM 40736]
          Length = 259

 Score =  210 bits (535), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 80/260 (30%), Positives = 128/260 (49%), Gaps = 1/260 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSI AR+  L AW++ +  D++CLQE K  ++ FP E L+ L Y        
Sbjct: 1   MRIATWNVNSITARLPRLLAWLESSGTDVLCLQEAKVAEEQFPSEQLRELGYESAVHATG 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVA+LS+    ++V  LPGD     +    A        LR+ ++Y+P+G  +    
Sbjct: 61  RWNGVAVLSRVGIEDVVKGLPGDPGFDGSVEPRAISATCGP-LRVWSVYVPNGREVDHPH 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W +      +       P    GDYN+ P   D ++P  + +    T   R + 
Sbjct: 120 YAYKLQWFEALKAAVAGDAAGSRPFAVMGDYNVAPTDDDVFDPAAFADSTHVTPAERAAL 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             L+  G +D +       H +++WDY    + KN+G+RID +  +   T  +  A +D 
Sbjct: 180 ASLREAGLSDVVPRPLKYEHPFTYWDYRQLCFPKNRGMRIDLVYANEPFTKAVEDAYVDR 239

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
           + R     SDH PV+V LD+
Sbjct: 240 EERKGKGASDHAPVVVDLDV 259


>gi|89901754|ref|YP_524225.1| exodeoxyribonuclease III [Rhodoferax ferrireducens T118]
 gi|89346491|gb|ABD70694.1| Exodeoxyribonuclease III [Rhodoferax ferrireducens T118]
          Length = 274

 Score =  210 bits (535), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 86/259 (33%), Positives = 134/259 (51%), Gaps = 5/259 (1%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
            +  ATWNVNS+  R+  +  W++ N  D++ LQE K  D  FP +  +   YH E  GQ
Sbjct: 15  TMKFATWNVNSLTVRLPQVLDWLQANPVDVLALQELKLTDDKFPVDAFRQAGYHAECFGQ 74

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K+YNGVA+LS+   + +V ++PG   D+               +R+   Y P+G    S 
Sbjct: 75  KTYNGVALLSREPALNVVRNVPGFADDMARSISAEVNG-----VRVIGAYFPNGQEPGSD 129

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           K++ K++W+K    +    L     L+  GDYNI     D ++P+  ++    T E R  
Sbjct: 130 KFEYKMAWLKGLRDWVRGELLTHPRLVLMGDYNITFDDADVWDPVGLKDTIHCTEEERYH 189

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
            + L  +G  D+ R        YS+WDY   ++ +N G+RIDHI++S     L+ +  ID
Sbjct: 190 LRALIALGLHDSFRLFAQPEKSYSWWDYRDFAFRRNHGLRIDHILVSDALKPLVTACVID 249

Query: 243 TKPRGWTKPSDHTPVIVSL 261
             PR   +PSDH PV+V+L
Sbjct: 250 KAPRKNERPSDHAPVVVTL 268


>gi|289705726|ref|ZP_06502110.1| exodeoxyribonuclease III [Micrococcus luteus SK58]
 gi|289557566|gb|EFD50873.1| exodeoxyribonuclease III [Micrococcus luteus SK58]
          Length = 275

 Score =  210 bits (535), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 78/274 (28%), Positives = 133/274 (48%), Gaps = 16/274 (5%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+RAR   + A+++ ++ D++ +QETK  D+NFP+E  +   Y +   G  
Sbjct: 1   MKIATWNVNSLRARADRVEAFLERHDIDVLAIQETKCRDENFPWELFERAGYEVVHNGTS 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT------------INTQTLRIGNL 111
            +NGVAI S+    ++    PG     +        +                 +R+ +L
Sbjct: 61  QWNGVAIASRVGLSDVQRGFPGQPHFGKGGVDPQEESRAIGATVGAEAADGVAPVRLWSL 120

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIW 169
           Y+P+G  + +     K+ W++     A+ RL  +       AGD+NI PQ  D ++  ++
Sbjct: 121 YVPNGRGLENEHMGYKLEWLRVLQEHAAARLAEDPDTRLALAGDWNIAPQDEDVWDIELF 180

Query: 170 E--NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227
           +       +   R +F   ++ G  D +R  H    +Y++WDY   ++ K KG+RID  +
Sbjct: 181 QREGYTHVSPAERAAFHAFEDAGLVDVVRPRHPGPGVYTYWDYTGLAFPKKKGMRIDFQL 240

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
            SP     +  A ID + R     SDH PV+V L
Sbjct: 241 CSPALAQTVTDAWIDREERKGKGASDHAPVVVEL 274


>gi|21224654|ref|NP_630433.1| exonuclease [Streptomyces coelicolor A3(2)]
 gi|3367747|emb|CAA20072.1| putative exonuclease [Streptomyces coelicolor A3(2)]
          Length = 259

 Score =  210 bits (535), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 77/260 (29%), Positives = 124/260 (47%), Gaps = 1/260 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSI AR+  L AW++ +  D++CLQE K  +  FPF+ L+   Y        
Sbjct: 1   MRIATWNVNSITARLPRLLAWLESSGTDVLCLQEAKVAEAQFPFDALREAGYEAAVHATG 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVA+LS+    ++V  LPGD      +   A        +R+ ++Y+P+G  +    
Sbjct: 61  RWNGVAVLSRVGLEDVVKGLPGDPGYEGVQEPRAISATCGP-VRVWSVYVPNGREVDHPH 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W +              P    GDYN+ P   D Y+   +E     T   R + 
Sbjct: 120 YAYKLQWFEALRAAVEGDAAGGRPFAVLGDYNVAPTDDDVYDRAAFEGATHVTPAERAAL 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             L+  G +D +       H +++WDY    + KN+G+RID +  +      +  + +D 
Sbjct: 180 ASLRGAGLSDVVPRPLKYDHPFTYWDYRQLCFPKNRGMRIDLVYGNEPFAKAVTDSYVDR 239

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
           + R     SDH PV+V LD+
Sbjct: 240 EERKGKGASDHAPVVVDLDL 259


>gi|294632194|ref|ZP_06710754.1| exodeoxyribonuclease III [Streptomyces sp. e14]
 gi|292835527|gb|EFF93876.1| exodeoxyribonuclease III [Streptomyces sp. e14]
          Length = 261

 Score =  210 bits (535), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 79/260 (30%), Positives = 124/260 (47%), Gaps = 1/260 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSI AR+  L AW++ +  D++CLQE K  +  FP E L+ L Y        
Sbjct: 3   MRIATWNVNSITARLPRLLAWLESSGTDVLCLQEAKVAEDQFPAEQLRELGYESAVHATG 62

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVA+LS+    ++V  LPGD      +   A        +R+ ++Y+P+G  +    
Sbjct: 63  RWNGVAVLSRVGLADVVKGLPGDPGYDGVQEPRAVSATCGP-VRVWSVYVPNGREVDHPH 121

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W +      +       P    GDYN+ P   D Y+   +E     T   R + 
Sbjct: 122 YAYKLEWFEALKAAVAGDAAGSRPFAVLGDYNVAPTDDDVYDRAAFEGATHVTPAERAAL 181

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             L+  G  D +       H +++WDY    + KN+G+RID +  +      +  A +D 
Sbjct: 182 ASLREAGLADVVPRPLKYEHPFTYWDYRQLCFPKNRGMRIDLVYGNEPFAKAVTDAYVDR 241

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
           + R     SDH PV+V LD+
Sbjct: 242 EERKGKGASDHAPVVVDLDV 261


>gi|91777907|ref|YP_553115.1| exodeoxyribonuclease III [Burkholderia xenovorans LB400]
 gi|91690567|gb|ABE33765.1| Exodeoxyribonuclease III [Burkholderia xenovorans LB400]
          Length = 270

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 104/272 (38%), Positives = 154/272 (56%), Gaps = 5/272 (1%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           M+ + +AT+N+N IR+R+  L  W++   PDI+CLQE K  D  FP E L+   Y     
Sbjct: 1   MAKLRIATFNINGIRSRLPALLQWLEREAPDIVCLQELKAADSAFPVEQLRDAGYGAIWQ 60

Query: 61  GQKSYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
           GQ ++NGVAILSK   P+E    LPG + D  +R++EA        + +  LYLP+GNP 
Sbjct: 61  GQSAWNGVAILSKGEAPLESRRGLPGFEDDTHSRYLEAAVGG----IVVACLYLPNGNPQ 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K+D K++W    +R A++      P++ AGD+N++P   D YNP  W  DA    E 
Sbjct: 117 PGPKFDYKLAWFDHLIRHAAKLYRSGHPVVLAGDFNVVPTDEDIYNPRSWLKDALLQPES 176

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R+ +++L   G+TDA+R       +Y+FWDY+   W  N G+RIDH++LS +    L  A
Sbjct: 177 RERYRQLLAQGWTDALRTRFGNERVYTFWDYFRRHWETNSGLRIDHLLLSADLAPRLRDA 236

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271
            +D   RG    SDH P  V L++   R+K+ 
Sbjct: 237 GVDRWVRGEPHASDHAPTWVELEMGAGRRKKS 268


>gi|256422393|ref|YP_003123046.1| exodeoxyribonuclease III Xth [Chitinophaga pinensis DSM 2588]
 gi|256037301|gb|ACU60845.1| exodeoxyribonuclease III Xth [Chitinophaga pinensis DSM 2588]
          Length = 259

 Score =  210 bits (535), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 99/257 (38%), Positives = 148/257 (57%), Gaps = 2/257 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+NVN +  R+  L  W++E+ PD++CLQE K   + FP + ++   Y+    GQK
Sbjct: 1   MKIATYNVNGVNGRLPVLLRWLEESAPDVVCLQELKAPQEKFPEQAIRDAGYNAIWHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           S+NGVAIL++   IE +        D +         +      +G LYLP+GNP    K
Sbjct: 61  SWNGVAILARNLQIEEIRRAL--PGDPEDVHSRYIEAVINGDFILGCLYLPNGNPAPGPK 118

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +D K++W KR    A + L  + P+I  GDYN++P   D Y P  W +DA F  E R +F
Sbjct: 119 FDYKLNWFKRLTAHAKELLAQDVPVILTGDYNVMPTELDVYKPERWVDDALFRPETRAAF 178

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           ++L  +G+TDAIR  +    +Y+FWDY+ D++ +N G+RIDH +LSP     L +A +D 
Sbjct: 179 KELVELGWTDAIRKLYPEEKIYTFWDYFRDAYGRNAGLRIDHFLLSPHFGKRLKAAGVDR 238

Query: 244 KPRGWTKPSDHTPVIVS 260
             RGW K SDH PV + 
Sbjct: 239 DVRGWEKTSDHAPVWIE 255


>gi|86607730|ref|YP_476492.1| exodeoxyribonuclease III [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86556272|gb|ABD01229.1| exodeoxyribonuclease III [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 261

 Score =  210 bits (534), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 94/262 (35%), Positives = 140/262 (53%), Gaps = 3/262 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNP-DIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + VATWNVNSIR R+  + AW+      D++CLQETK  D++FP    Q   +H+E  GQ
Sbjct: 1   MQVATWNVNSIRTRLPQVLAWLDSQGSLDVLCLQETKVVDEDFPRAAFQERGFHVEVYGQ 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT-FTINTQTLRIGNLYLPHGNPITS 121
           KSYNGVA++S+  P ++                +    +   + +RI NLY+P+G  + S
Sbjct: 61  KSYNGVALISRDPPEKVERGFGALLPSAADLDEQKRLMSAIYRGIRILNLYVPNGAEVGS 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            KY  K+ W+     + +  L   +P++  GD+NI  +  D Y+P           E + 
Sbjct: 121 EKYAYKLRWLATLKDYLAVALSQGDPILLCGDFNIALEDRDIYDPQKAGEIMASEPERQ- 179

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           + Q++  +GF DA R        +S+WDY +  + +N+G RIDH  LS E      +  I
Sbjct: 180 ALQEILALGFEDAFRRFTPDPGHFSWWDYRSGGFQRNRGWRIDHHYLSRELQEKATACWI 239

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
           D +PR   KPSDH PVIV+LDI
Sbjct: 240 DVEPRRAEKPSDHAPVIVALDI 261


>gi|254818951|ref|ZP_05223952.1| exodeoxyribonuclease III [Mycobacterium intracellulare ATCC 13950]
          Length = 268

 Score =  210 bits (534), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 80/268 (29%), Positives = 125/268 (46%), Gaps = 7/268 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSIR+R+  +  W+   + D++ +QETK  D  FP      L Y +   G  
Sbjct: 1   MRIATWNVNSIRSRLPRVLDWLARTDVDVLAMQETKCSDSQFPTLPFFELGYEVAHVGFN 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLD-----VQARFIEATFTINTQTLRIGNLYLPHGNP 118
            +NGVAI S+    ++     G         V A             +R+ +LY+P+G  
Sbjct: 61  QWNGVAIASRVGLDDVQIGFDGQPTWSGKPEVAAVAEARALAATCGGVRLWSLYVPNGRA 120

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEP--LIFAGDYNIIPQPHDCYNPIIWENDACFT 176
           +    Y  K+ W+      A   L  +    +  AGD+NI PQ  D ++   +      +
Sbjct: 121 LGDPHYAYKLDWLAALRDSAEGWLRDDPGAAIALAGDWNIAPQDDDVWSMEFFAGATHVS 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
              R++F  +    FTD +R       +Y++WDY    + K +G+RID I+ SP   S +
Sbjct: 181 APERRAFNAIVEAQFTDLVRPFAPGPGVYTYWDYTRLRFPKRQGMRIDFILGSPALASRV 240

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDIP 264
             ARID + R     SDH PV+V L + 
Sbjct: 241 TDARIDREERKGKAASDHAPVLVDLRVD 268


>gi|217979561|ref|YP_002363708.1| exodeoxyribonuclease III Xth [Methylocella silvestris BL2]
 gi|217504937|gb|ACK52346.1| exodeoxyribonuclease III Xth [Methylocella silvestris BL2]
          Length = 303

 Score =  210 bits (534), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 122/279 (43%), Positives = 173/279 (62%), Gaps = 6/279 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+NVN I  R+  L  W+KE  PD++CLQE K  D+ FP   L++  Y     GQK
Sbjct: 1   MKIATFNVNGINGRLSVLLRWLKETRPDVVCLQELKAPDERFPIRELENAGYGAIWHGQK 60

Query: 64  SYNGVAILSKY-QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           S+NGVAILS   +PIE    LPGD  D Q+R++EA        + +  LYLP+GNP    
Sbjct: 61  SWNGVAILSASGKPIETRRGLPGDPDDSQSRYLEAAIDG----IVVACLYLPNGNPAPGR 116

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           K+D K+ W++R   +A++ L L+ P+I AGDYNIIP   D Y P  W +DA F LEVR++
Sbjct: 117 KFDYKLQWLQRLTDYAAELLALKVPVILAGDYNIIPTELDVYKPERWVDDALFRLEVREA 176

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           FQ L + G+TDA+R  H    +Y+FWDY+ ++W +N G+R+DH++L+P  T  L +A +D
Sbjct: 177 FQILVSQGWTDALRTLHPGERVYTFWDYFRNAWDRNAGLRLDHLLLNPPVTKRLIAADVD 236

Query: 243 TKPRGWTKPSDHTPVIVSL-DIPEPRKKQQDSTSQNMKP 280
              RGW K SDH PV + L D   P ++   S+    +P
Sbjct: 237 RAVRGWEKASDHAPVWIELSDAARPLRRPSASSKGVARP 275


>gi|310814721|ref|YP_003962685.1| exodeoxyribonuclease III [Ketogulonicigenium vulgare Y25]
 gi|308753456|gb|ADO41385.1| exodeoxyribonuclease III [Ketogulonicigenium vulgare Y25]
          Length = 259

 Score =  210 bits (534), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 118/259 (45%), Positives = 163/259 (62%), Gaps = 1/259 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+N+N I+AR+  +  W+   +PD+   QE K+ D+ FP   ++ L Y++ET GQK
Sbjct: 1   MRIATYNINGIKARLETVTEWLTRESPDVAIFQEIKSVDEGFPRSAIEDLGYNLETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVAI SK    ++   LPGDD D Q+R+IEAT  I    +RI  LYLP+GNP    K
Sbjct: 61  GFNGVAIASKLPMEDVTRGLPGDDNDEQSRWIEAT-VIGKTAVRICGLYLPNGNPAPGPK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           YD K++W++R  + A   L  EEP   AGDYN+IPQ  D  NP  W  DA +  + R +F
Sbjct: 120 YDYKLAWMERLHKRAEALLASEEPAFMAGDYNVIPQAEDAKNPAEWLEDALYLPQTRDAF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           +++ N+GFTDA RA       YSFWD+ A +W ++ GIRIDH +L+P+   LL +A I+ 
Sbjct: 180 RRILNLGFTDAFRAITQGPGHYSFWDFQAGAWQRDNGIRIDHFLLTPQCADLLQNAWIEK 239

Query: 244 KPRGWTKPSDHTPVIVSLD 262
             RG  KPSDH PV V LD
Sbjct: 240 DARGREKPSDHVPVWVELD 258


>gi|238794520|ref|ZP_04638129.1| Exodeoxyribonuclease III [Yersinia intermedia ATCC 29909]
 gi|238726203|gb|EEQ17748.1| Exodeoxyribonuclease III [Yersinia intermedia ATCC 29909]
          Length = 271

 Score =  210 bits (534), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 85/271 (31%), Positives = 131/271 (48%), Gaps = 8/271 (2%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           M  +   ++N+N +RAR H LAA I+++ PD+I LQETK  D  FP E +    YH+   
Sbjct: 1   MLTMKFVSFNINGLRARPHQLAAIIEQHQPDVIGLQETKVHDDMFPLEDVSQHGYHVFYH 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           GQK + GVA+L+K +P+ +    P D+ D Q R I A    +   L + N Y P G    
Sbjct: 61  GQKGHYGVALLTKNEPLAVRRGFPTDEEDAQRRIIMADIATSNGPLTVINGYFPQGESRD 120

Query: 121 STK-YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDA 173
               +  K  +     ++  Q+L  +  ++  GD NI P         D     +     
Sbjct: 121 HPIKFPAKERFYADLQQYLEQQLSADAQVLIMGDLNISPTDLDIGIGEDSRKRWLRTGKC 180

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
            F  E R    +LQN G  D  RA +   +  +S++DY +  + +N+G+RID ++ S   
Sbjct: 181 SFLPEERAWLARLQNWGLVDTFRAANPECNDQFSWFDYRSRGFDENRGLRIDLLLASQPL 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            +   +  ID + RG  KPSDH PV     +
Sbjct: 241 ATRCIATGIDYEIRGMEKPSDHAPVWSEFAL 271


>gi|327481832|gb|AEA85142.1| exodeoxyribonuclease III [Pseudomonas stutzeri DSM 4166]
          Length = 263

 Score =  210 bits (534), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 109/262 (41%), Positives = 159/262 (60%), Gaps = 5/262 (1%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           M  + +AT+N+N IRAR+ NL  W++   PD++CLQE K +D +FP + ++   Y     
Sbjct: 1   MDRLKIATFNINGIRARLPNLLEWLEREQPDVVCLQELKAQDADFPIDDIRGAGYGAIWH 60

Query: 61  GQKSYNGVAILSKY-QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
           GQKS+NGVAIL++  +P+EI   LPGD  D  +R++EA        + + +LYLP+GNP 
Sbjct: 61  GQKSWNGVAILARDSEPLEIRRGLPGDPDDSHSRYLEAAV----HGVIVASLYLPNGNPQ 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K+D K++W +R +  A+  L    P++ AGDYN++P   D YNP  W  DA    E 
Sbjct: 117 PGPKFDYKLAWFERLIEHAAGLLASGHPVVLAGDYNVVPTDEDIYNPRSWRKDALLQPES 176

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R  +++L   G+TDA+RA      +Y+FWDY+   W KN G+RIDH++LSP+    L +A
Sbjct: 177 RACYERLLAQGWTDALRAQFPDEPVYTFWDYFRQHWQKNSGLRIDHLLLSPDLAPCLQAA 236

Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261
            +D   RG    SDH P  VSL
Sbjct: 237 GVDRWVRGQEHASDHAPTWVSL 258


>gi|302537782|ref|ZP_07290124.1| exodeoxyribonuclease III [Streptomyces sp. C]
 gi|302446677|gb|EFL18493.1| exodeoxyribonuclease III [Streptomyces sp. C]
          Length = 259

 Score =  210 bits (534), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 76/260 (29%), Positives = 126/260 (48%), Gaps = 1/260 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+NVNSI AR+  L AW++ +  D++C+QETK   + FP   L+ L Y        
Sbjct: 1   MRIATYNVNSITARLPRLLAWLESSGTDVLCVQETKCSAEQFPAAELRELGYESVVNATG 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVA+LS+    ++V  LPG       +   A        +R+ ++Y+P+G  +    
Sbjct: 61  RWNGVALLSRVGLEDVVVGLPGGPDYEGVQEPRAISATCGG-VRVWSVYVPNGREVEHDH 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K++W        ++      P    GD+N+ P   D Y+P ++      T   R + 
Sbjct: 120 YGYKLNWFGALATAIAEDAAGTRPFAVLGDFNVAPTDEDVYDPAVFAGLTHVTPAERAAL 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + L+  G  D +         Y+FWDY   ++ KN+G+RID +  +      +  A +D 
Sbjct: 180 EALRTAGLADVMPRALKYDRPYTFWDYRQLAFPKNRGMRIDLVYGNEPFAKAVKDAYVDR 239

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
           + R     SDH PV+V LD+
Sbjct: 240 EERKGKGASDHAPVVVDLDL 259


>gi|126735878|ref|ZP_01751622.1| exodeoxyribonuclease III [Roseobacter sp. CCS2]
 gi|126714435|gb|EBA11302.1| exodeoxyribonuclease III [Roseobacter sp. CCS2]
          Length = 266

 Score =  210 bits (534), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 111/264 (42%), Positives = 154/264 (58%), Gaps = 6/264 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+N+N ++ARI  L  WI E  PD+  LQE K+ D+ FP E  +   Y++ET GQK
Sbjct: 1   MKIATFNINGVKARIGALTDWIDEAQPDVAVLQEIKSVDEGFPREVFEDKGYNVETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT------QTLRIGNLYLPHGN 117
            +NGVAILSK    ++   LPG +   +    +             + +RI  LYLP+GN
Sbjct: 61  GFNGVAILSKLPLEDVTRGLPGAEGAGREGVDDEEARYIEATVVGEKAVRICGLYLPNGN 120

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
           P    KYD K+ W++R    A Q +  EE  +  GDYNIIPQ  D   P  W +DA F  
Sbjct: 121 PAPGPKYDYKLRWMERLHARAQQLMAHEEVALMCGDYNIIPQAEDAARPDAWRDDALFRQ 180

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
           + R +++++ N+GFT+A RA       YSFWDY A +W KN GIRIDH +L+P+   LL+
Sbjct: 181 DSRDAYRRILNLGFTEAFRAREAGAGHYSFWDYQAGAWDKNDGIRIDHFLLTPQCADLLN 240

Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261
           +  I++  RG  KPSDH PV V L
Sbjct: 241 TCWIESDVRGREKPSDHVPVWVDL 264


>gi|254422826|ref|ZP_05036544.1| exodeoxyribonuclease III [Synechococcus sp. PCC 7335]
 gi|196190315|gb|EDX85279.1| exodeoxyribonuclease III [Synechococcus sp. PCC 7335]
          Length = 261

 Score =  210 bits (534), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 92/261 (35%), Positives = 138/261 (52%), Gaps = 3/261 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V +WNVNSIR R+  +  W++ N  D++CLQETK  DK+FP +    + YH    GQK
Sbjct: 1   MKVTSWNVNSIRTRLEQVTQWLQANPVDVLCLQETKVVDKDFPAQAFIDIGYHAYFYGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQA---RFIEATFTINTQTLRIGNLYLPHGNPIT 120
           SYNGVA++S+     +         +         +   +     +RI NLY+P+G+ I 
Sbjct: 61  SYNGVALVSRAPLESVQMGFGAILDEATVGDLDAQKRVISGVLGNVRIVNLYVPNGSSIN 120

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
           S KY+ K+SW+    ++   +LE    L   GD+NI  +  D Y     +     +   R
Sbjct: 121 SEKYEYKLSWLALLKQYLVHQLEAHPKLNVCGDFNIALENKDIYTDKNRDKHIMSSPVER 180

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           Q+ + + ++G +DA R   D    +S+WDY  +S+++N G RIDH  LSP    +  S  
Sbjct: 181 QTLRDVLSVGLSDAFRKFTDEGGHFSWWDYRTNSFARNTGWRIDHHYLSPSLYEIATSCT 240

Query: 241 IDTKPRGWTKPSDHTPVIVSL 261
           IDT PRG  +PSDH PV V  
Sbjct: 241 IDTVPRGLERPSDHAPVTVEY 261


>gi|217969881|ref|YP_002355115.1| exodeoxyribonuclease III Xth [Thauera sp. MZ1T]
 gi|217507208|gb|ACK54219.1| exodeoxyribonuclease III Xth [Thauera sp. MZ1T]
          Length = 254

 Score =  210 bits (534), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 87/258 (33%), Positives = 138/258 (53%), Gaps = 5/258 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS++ R+  +  W+  N PD +CLQE K EDK FP   L++  YH    GQK
Sbjct: 1   MKIATWNVNSLKVRLPQVLDWLAANQPDALCLQELKLEDKAFPLAELEAAGYHAVFIGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAILS                + + + I A        +R+   Y P+G  + S K
Sbjct: 61  TYNGVAILSPQPIDAATVVRNIPGFEDEQKRIIAATIAG---VRVVCGYFPNGQAVGSDK 117

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           ++ K+ W+     +    L+  E L+ AGD+NI P+  D +    W+++   +   R +F
Sbjct: 118 FEYKLRWLAALTEWLRAELKTHERLVLAGDFNIAPEDRDAHPD--WKDEIHVSAPERAAF 175

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + LQ +G  DA R        +S+WDY   ++ +N G+RIDH+++SP   +   +  +D 
Sbjct: 176 RALQELGLIDAFRLFEQPERAFSWWDYRMMAFRRNFGLRIDHLLVSPALRAACRNCVVDK 235

Query: 244 KPRGWTKPSDHTPVIVSL 261
           +PR   +PSDH PV++ L
Sbjct: 236 EPRRLERPSDHAPVVLEL 253


>gi|238751649|ref|ZP_04613139.1| Exodeoxyribonuclease III [Yersinia rohdei ATCC 43380]
 gi|238710211|gb|EEQ02439.1| Exodeoxyribonuclease III [Yersinia rohdei ATCC 43380]
          Length = 271

 Score =  210 bits (534), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 86/271 (31%), Positives = 130/271 (47%), Gaps = 8/271 (2%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           M  +   ++N+N +RAR H LAA I+++ PD+I LQETK  D  FP E +    YH+   
Sbjct: 1   MLTMKFVSFNINGLRARPHQLAAIIEQHQPDVIGLQETKVHDDMFPLEDVSQHGYHVFYH 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           GQK + GVA+L+K QP+ +    P D+ D Q R I A       TL + N Y P G    
Sbjct: 61  GQKGHYGVALLTKEQPLAVRRGFPTDEEDAQRRIIMADIATPQGTLTVINGYFPQGESRD 120

Query: 121 STK-YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDA 173
               +  K  +     ++  Q L  E  ++  GD NI P         +     +     
Sbjct: 121 HPIKFPAKQRFYADLQQYLEQHLSPESQVLIMGDINISPTDLDIGIGEESRKRWLRTGKC 180

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
            F  E R   + LQ+ G  D  RA +   +  +S++DY +  + +N+G+RID ++ S   
Sbjct: 181 SFLPEERAWLEHLQSWGLVDTFRAANPDCNDQFSWFDYRSRGFDENRGLRIDLLLASQPL 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            +   +  ID + RG  KPSDH PV     +
Sbjct: 241 AARCIATGIDYEIRGMEKPSDHAPVWSEFAL 271


>gi|148548255|ref|YP_001268357.1| exodeoxyribonuclease III [Pseudomonas putida F1]
 gi|148512313|gb|ABQ79173.1| Exodeoxyribonuclease III [Pseudomonas putida F1]
          Length = 265

 Score =  210 bits (534), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 104/262 (39%), Positives = 152/262 (58%), Gaps = 5/262 (1%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           M  + +AT+N+N IR+R+  L AW++   PDI CLQE K  D+ FP   L++  Y     
Sbjct: 1   MKALKIATFNINGIRSRLPALLAWLEREQPDIACLQELKAADQQFPRAELEAAGYGSLHH 60

Query: 61  GQKSYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
           GQ S+NGVAIL +   P+E+   LPG + D Q+R++EA        + +  LYLP+GNP 
Sbjct: 61  GQPSWNGVAILVRGSDPLEVRRGLPGLEEDSQSRYLEAA----AHGVLVACLYLPNGNPQ 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K+D K+ W +  ++ A    E   P + AGD+N++P   D YNP  W  DA    E 
Sbjct: 117 PGPKFDYKLHWFECLIQHARSLYESGHPTLLAGDFNVVPTDMDIYNPRSWLKDALLQPES 176

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R  +Q+L + G+ DAIR  +    +Y+FWDY+ + W++N G+RIDH++L+PE    L  A
Sbjct: 177 RACYQRLLDQGWLDAIRHLYPDERVYTFWDYFRNHWARNAGLRIDHLLLNPELAPYLKRA 236

Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261
            +D   R   K SDH PV + L
Sbjct: 237 GVDAWVRNEAKASDHAPVWIEL 258


>gi|330466791|ref|YP_004404534.1| exodeoxyribonuclease III Xth [Verrucosispora maris AB-18-032]
 gi|328809762|gb|AEB43934.1| exodeoxyribonuclease III Xth [Verrucosispora maris AB-18-032]
          Length = 265

 Score =  210 bits (534), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 76/257 (29%), Positives = 126/257 (49%), Gaps = 2/257 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS++AR+  L  W+    PD++CLQETK  D  FP   +  L Y + +    
Sbjct: 1   MRLATWNVNSVKARLPRLLDWLAGTEPDVVCLQETKCPDGAFPVAEVGDLGYTVASHSDG 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVAILS+    ++    PG+    +        T +   +R+ ++Y+P+G       
Sbjct: 61  RWNGVAILSRIGLSDVTVGFPGEPGFPEPEARAIAATCDG--VRVWSVYVPNGRTPDDPH 118

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K++W+          L     L   GD+N+ P   D ++P ++      T   R + 
Sbjct: 119 YAYKLAWLAALRDALDAELTDGRALAVCGDFNVAPTDDDVWDPALFATSTHVTPAERAAL 178

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             L+++G  D +       H +++WDY A  + +NKG+RID +  S      + SA +D 
Sbjct: 179 AALRDLGLVDVVPTPMKGPHPFTYWDYRAGMFHQNKGMRIDLVYASAPFARTVSSAYVDR 238

Query: 244 KPRGWTKPSDHTPVIVS 260
           + R    PSDH P++V 
Sbjct: 239 EARKGRSPSDHAPIVVD 255


>gi|227820280|ref|YP_002824251.1| exonuclease [Sinorhizobium fredii NGR234]
 gi|227339279|gb|ACP23498.1| probable exonuclease [Sinorhizobium fredii NGR234]
          Length = 257

 Score =  210 bits (534), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 88/259 (33%), Positives = 141/259 (54%), Gaps = 3/259 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+N+N +  R+ NL AW+    PD++CLQE K  D  FP   +++  Y     GQ 
Sbjct: 1   MKIATFNINGVNKRLENLLAWLDAAEPDVVCLQELKATDGQFPKSAIEAAGYGAVWRGQS 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           ++NGVAIL++     +      +     +             + I  LY P+GNP    K
Sbjct: 61  AWNGVAILARDSEPVLTR---TELPGDPSDTQSRYIEAAVNGILIAALYAPNGNPQPGPK 117

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +D K++W +R    A++ LE   P++ AGDYNI+P+P D Y    ++++A    E R +F
Sbjct: 118 FDYKLAWHRRLAGHAAELLETGLPVVLAGDYNIVPEPRDIYPTRSYDDNALVQPESRAAF 177

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           ++L + G+ DA+R  +    L++FWDY  + W +N G+R+DHI+LS +    L    ID 
Sbjct: 178 RQLLDQGWLDALRKVYPDEELFTFWDYRRNRWQRNAGLRLDHILLSRKLARRLTGGGIDR 237

Query: 244 KPRGWTKPSDHTPVIVSLD 262
             RG    SDH PV ++L+
Sbjct: 238 DVRGQENASDHAPVWIALE 256


>gi|238561644|ref|ZP_00441777.2| exodeoxyribonuclease III [Burkholderia mallei GB8 horse 4]
 gi|254200314|ref|ZP_04906680.1| exodeoxyribonuclease III [Burkholderia mallei FMH]
 gi|254209389|ref|ZP_04915735.1| exodeoxyribonuclease III [Burkholderia mallei JHU]
 gi|147749910|gb|EDK56984.1| exodeoxyribonuclease III [Burkholderia mallei FMH]
 gi|147750162|gb|EDK57233.1| exodeoxyribonuclease III [Burkholderia mallei JHU]
 gi|238524267|gb|EEP87701.1| exodeoxyribonuclease III [Burkholderia mallei GB8 horse 4]
          Length = 269

 Score =  210 bits (534), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 87/258 (33%), Positives = 134/258 (51%), Gaps = 1/258 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+  R  ++  W+ +++ D++CLQE K  D+ FP E L++  Y     GQK
Sbjct: 12  MRIATWNVNSLNVRKQHVLDWLAQSDVDVLCLQELKIPDEKFPREALEAAGYRSWFAGQK 71

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAIL++       T +  +    +              +RI + Y P+G  + S K
Sbjct: 72  TYNGVAILARASLPFDETDIVRNIPGFEDAQQRLIAATIDG-VRIVSAYFPNGQALDSDK 130

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W+     +    L+    L   GDYNI P+  D ++P  WE     + + R  F
Sbjct: 131 FVYKMQWLDALQAWLKDELQRYPKLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHF 190

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            +L  +GF DA R        +++WDY   ++ +N G+RIDHI+LSP       S  +D 
Sbjct: 191 AQLVALGFVDAFRRFEQPEKTFTWWDYRMLAFRRNAGLRIDHILLSPALAETCTSCTVDR 250

Query: 244 KPRGWTKPSDHTPVIVSL 261
            PR W +PSDHTPV+  L
Sbjct: 251 VPRTWEQPSDHTPVVAQL 268


>gi|312113058|ref|YP_004010654.1| exodeoxyribonuclease III Xth [Rhodomicrobium vannielii ATCC 17100]
 gi|311218187|gb|ADP69555.1| exodeoxyribonuclease III Xth [Rhodomicrobium vannielii ATCC 17100]
          Length = 262

 Score =  210 bits (533), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 128/260 (49%), Positives = 167/260 (64%), Gaps = 1/260 (0%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           ++TVATWNVNSI+ R      W+K   PD++CLQE K + + FP    + L Y+    GQ
Sbjct: 1   MLTVATWNVNSIKQREIAAVQWLKRARPDVLCLQEIKCQTEAFPRGAFEDLGYNCAVIGQ 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT-LRIGNLYLPHGNPITS 121
           KS+NGVAILSK+   E V  LPGDD D Q+R+IEA  ++      R+ ++Y P+GNP+ S
Sbjct: 61  KSFNGVAILSKFPIDETVVGLPGDDTDEQSRYIEAVLSLPGGGAFRVASVYAPNGNPVAS 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            K D K+ W+ RF   A   L  EEP   AGDYNIIP+  D YNP  W  DA + LE RQ
Sbjct: 121 PKLDYKLEWLARFKAHAETLLSYEEPFALAGDYNIIPRGIDVYNPAAWTEDALYRLESRQ 180

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           +F+++ N+G  DA+ A +     ++FWDY A +W KN G+RIDHI+LSP+A S L S  I
Sbjct: 181 AFRRILNLGLADAVEACNSGGGQFTFWDYQAGAWQKNLGLRIDHILLSPQAFSRLRSTVI 240

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
           D  PR W KPSDHTPV V+L
Sbjct: 241 DRTPRSWDKPSDHTPVQVTL 260


>gi|254447579|ref|ZP_05061045.1| exodeoxyribonuclease III [gamma proteobacterium HTCC5015]
 gi|198262922|gb|EDY87201.1| exodeoxyribonuclease III [gamma proteobacterium HTCC5015]
          Length = 261

 Score =  210 bits (533), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 85/258 (32%), Positives = 136/258 (52%), Gaps = 2/258 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A+WNVNS++ R+  +  W+++ N D++CLQETK  D  FP   ++   Y +   GQK
Sbjct: 1   MKIASWNVNSLKVRLPYVLDWLEQTNTDVLCLQETKLTDDKFPDLAIEEAGYEVAFSGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAIL K     +   +      V  +      TI    +R+ +LY+ +G  + S K
Sbjct: 61  TYNGVAILLKKNAASLRDVVTDVPGLVDPQRRIMAATIGD--VRVIDLYVVNGKEVGSDK 118

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           YD K+ W+K+   +  Q+ +  E LI  GD+NI P+  D Y+PI W      +   R + 
Sbjct: 119 YDYKLHWLKKVGDYIEQQSQQYEKLIVLGDFNIAPEDEDVYDPIAWSEKILCSTPERDAL 178

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           +++++ G  D  R  +     YS+WD+    +   +G+RID I+ S     +L    ID 
Sbjct: 179 KRIKDNGLKDCFRMLNQDSGEYSWWDFRTKGFENGRGLRIDLILASEALQKVLKGCWIDR 238

Query: 244 KPRGWTKPSDHTPVIVSL 261
           +PR   KPSDH PV+   
Sbjct: 239 QPRAGEKPSDHAPVVAEF 256


>gi|254561142|ref|YP_003068237.1| exodeoxyribonuclease III [Methylobacterium extorquens DM4]
 gi|254268420|emb|CAX24377.1| Exodeoxyribonuclease III (Exonuclease III) (EXO III) (AP
           endonuclease VI) [Methylobacterium extorquens DM4]
          Length = 264

 Score =  210 bits (533), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 115/261 (44%), Positives = 161/261 (61%), Gaps = 3/261 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + TWNVNSI+ R+ +L  ++ E  PD++CLQE K +D +FP E +++  Y +ET GQK
Sbjct: 1   MRITTWNVNSIKQRVGHLLGFLDEAKPDVVCLQELKCQDASFPREEIEAAGYAVETLGQK 60

Query: 64  SYNGVAILSKYQPIEIV--THLPGDDLDVQARFIEATFTINTQ-TLRIGNLYLPHGNPIT 120
           +YNGVA+L +           LPGD  D QAR+IEA         +R+ ++YLP+GNP  
Sbjct: 61  AYNGVALLVRAPLQYTQLLRGLPGDAEDEQARYIEALVHGEGVAPVRVASIYLPNGNPAP 120

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             KY  K++++ R    A   +  EE L+ AGD+N+IP+P D  +P  W  DA F  E R
Sbjct: 121 GPKYSYKLAFMARLRTHARALMTTEEALVLAGDFNVIPEPEDAADPTAWTQDALFLPETR 180

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           ++F+ L   GFTD +RA   +  LY+FWDY A  W +N+GIRIDH++LSP+A   L SA 
Sbjct: 181 RAFRALVAEGFTDGLRACEPSAGLYTFWDYQAGCWPRNQGIRIDHLLLSPQAADRLVSAS 240

Query: 241 IDTKPRGWTKPSDHTPVIVSL 261
           +    RG  KPSDH PV V L
Sbjct: 241 VQRHLRGLEKPSDHVPVTVEL 261


>gi|238028045|ref|YP_002912276.1| exodeoxyribonuclease III xth [Burkholderia glumae BGR1]
 gi|237877239|gb|ACR29572.1| Exodeoxyribonuclease III xth [Burkholderia glumae BGR1]
          Length = 258

 Score =  210 bits (533), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 82/256 (32%), Positives = 127/256 (49%), Gaps = 1/256 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+  R  ++  W+  +  D++CLQE K  D+ FP   L++  Y     GQK
Sbjct: 1   MKIATWNVNSLNVRKQHVLDWLASSQTDVLCLQELKLPDEKFPKADLEAAGYRSWFTGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAIL +   + +       ++       +         +RI + Y P+G    + K
Sbjct: 61  TYNGVAILVRDT-LGVDETDVVKNIPGFEDAQQRVIAATVNGVRIVSAYFPNGQAPGTDK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W+     +    L     L   GDYNI P+  D ++P  WE     + + R  F
Sbjct: 120 FAYKMQWLDALQAWLKDELARHPKLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             L  MG  DA R        +++WDY    + +N G+RIDHI+LSP   + L +  +D 
Sbjct: 180 AALLGMGLVDAFRRFEQPEKTFTWWDYRMLGFRRNAGLRIDHILLSPALATTLRACEVDR 239

Query: 244 KPRGWTKPSDHTPVIV 259
           +PRGW +PSDH P+  
Sbjct: 240 EPRGWEQPSDHAPIFA 255


>gi|270159292|ref|ZP_06187948.1| exodeoxyribonuclease III [Legionella longbeachae D-4968]
 gi|289165884|ref|YP_003456022.1| exodeoxyribonuclease III XthA [Legionella longbeachae NSW150]
 gi|269987631|gb|EEZ93886.1| exodeoxyribonuclease III [Legionella longbeachae D-4968]
 gi|288859057|emb|CBJ12986.1| putative exodeoxyribonuclease III XthA [Legionella longbeachae
           NSW150]
          Length = 259

 Score =  210 bits (533), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 94/263 (35%), Positives = 155/263 (58%), Gaps = 5/263 (1%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           ++ +A+WNVNS++ R+  + +W+  ++ DI+ +QETK  D NFP    +   YH+   GQ
Sbjct: 1   MIKLASWNVNSLKVRLEQVISWLDSSHVDILAIQETKLIDDNFPRAVFEEKGYHVVFSGQ 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K+YNGVAI+S+Y   +++T +P  D   +         +     R+ NLY+P+G+ +TS 
Sbjct: 61  KTYNGVAIISRYPFSDVLTDIPDLDDPQRRIL-----IVTVAGFRLINLYVPNGSELTSD 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           KY  K+ W+++   F  Q++ +   +   GD+NI P+  D ++PI WE     +   R +
Sbjct: 116 KYQYKLDWLQKVTNFIQQQINIYSKIAVVGDFNIAPEDRDVHDPIAWEGSVLVSPAERNA 175

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F +L  +GF D+ R        +S+WDY A ++ +N+G+RIDHI+LS E   L   + ID
Sbjct: 176 FVQLLQLGFHDSFRNFVQEDQSFSWWDYRAAAFRRNRGLRIDHILLSKELNHLCTQSVID 235

Query: 243 TKPRGWTKPSDHTPVIVSLDIPE 265
            +PR   +PSDH PV V+L++ E
Sbjct: 236 KEPRKVERPSDHAPVWVALELSE 258


>gi|53724173|ref|YP_103357.1| exodeoxyribonuclease III [Burkholderia mallei ATCC 23344]
 gi|121601562|ref|YP_993558.1| exodeoxyribonuclease III [Burkholderia mallei SAVP1]
 gi|124384052|ref|YP_001029013.1| exodeoxyribonuclease III [Burkholderia mallei NCTC 10229]
 gi|126440535|ref|YP_001059656.1| exodeoxyribonuclease III [Burkholderia pseudomallei 668]
 gi|126449755|ref|YP_001081066.1| exodeoxyribonuclease III [Burkholderia mallei NCTC 10247]
 gi|126452052|ref|YP_001066939.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1106a]
 gi|134277971|ref|ZP_01764686.1| exodeoxyribonuclease III [Burkholderia pseudomallei 305]
 gi|167003440|ref|ZP_02269226.1| exodeoxyribonuclease III [Burkholderia mallei PRL-20]
 gi|167720390|ref|ZP_02403626.1| exodeoxyribonuclease III [Burkholderia pseudomallei DM98]
 gi|167739381|ref|ZP_02412155.1| exodeoxyribonuclease III [Burkholderia pseudomallei 14]
 gi|167816592|ref|ZP_02448272.1| exodeoxyribonuclease III [Burkholderia pseudomallei 91]
 gi|167846507|ref|ZP_02472015.1| exodeoxyribonuclease III [Burkholderia pseudomallei B7210]
 gi|167895086|ref|ZP_02482488.1| exodeoxyribonuclease III [Burkholderia pseudomallei 7894]
 gi|167903470|ref|ZP_02490675.1| exodeoxyribonuclease III [Burkholderia pseudomallei NCTC 13177]
 gi|167911721|ref|ZP_02498812.1| exodeoxyribonuclease III [Burkholderia pseudomallei 112]
 gi|167919720|ref|ZP_02506811.1| exodeoxyribonuclease III [Burkholderia pseudomallei BCC215]
 gi|217421040|ref|ZP_03452545.1| exodeoxyribonuclease III [Burkholderia pseudomallei 576]
 gi|237813050|ref|YP_002897501.1| exodeoxyribonuclease III [Burkholderia pseudomallei MSHR346]
 gi|242317870|ref|ZP_04816886.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1106b]
 gi|254178518|ref|ZP_04885173.1| exodeoxyribonuclease III [Burkholderia mallei ATCC 10399]
 gi|254184341|ref|ZP_04890931.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1655]
 gi|254191371|ref|ZP_04897875.1| exodeoxyribonuclease III [Burkholderia pseudomallei Pasteur 52237]
 gi|254195861|ref|ZP_04902287.1| exodeoxyribonuclease III [Burkholderia pseudomallei S13]
 gi|254261312|ref|ZP_04952366.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1710a]
 gi|254297001|ref|ZP_04964454.1| exodeoxyribonuclease III [Burkholderia pseudomallei 406e]
 gi|254357938|ref|ZP_04974211.1| exodeoxyribonuclease III [Burkholderia mallei 2002721280]
 gi|52427596|gb|AAU48189.1| exodeoxyribonuclease III [Burkholderia mallei ATCC 23344]
 gi|121230372|gb|ABM52890.1| exodeoxyribonuclease III [Burkholderia mallei SAVP1]
 gi|124292072|gb|ABN01341.1| exodeoxyribonuclease III [Burkholderia mallei NCTC 10229]
 gi|126220028|gb|ABN83534.1| exodeoxyribonuclease III [Burkholderia pseudomallei 668]
 gi|126225694|gb|ABN89234.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1106a]
 gi|126242625|gb|ABO05718.1| exodeoxyribonuclease III [Burkholderia mallei NCTC 10247]
 gi|134251621|gb|EBA51700.1| exodeoxyribonuclease III [Burkholderia pseudomallei 305]
 gi|148027065|gb|EDK85086.1| exodeoxyribonuclease III [Burkholderia mallei 2002721280]
 gi|157807529|gb|EDO84699.1| exodeoxyribonuclease III [Burkholderia pseudomallei 406e]
 gi|157939043|gb|EDO94713.1| exodeoxyribonuclease III [Burkholderia pseudomallei Pasteur 52237]
 gi|160699557|gb|EDP89527.1| exodeoxyribonuclease III [Burkholderia mallei ATCC 10399]
 gi|169652606|gb|EDS85299.1| exodeoxyribonuclease III [Burkholderia pseudomallei S13]
 gi|184214872|gb|EDU11915.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1655]
 gi|217396452|gb|EEC36469.1| exodeoxyribonuclease III [Burkholderia pseudomallei 576]
 gi|237503790|gb|ACQ96108.1| exodeoxyribonuclease III [Burkholderia pseudomallei MSHR346]
 gi|242141109|gb|EES27511.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1106b]
 gi|243061042|gb|EES43228.1| exodeoxyribonuclease III [Burkholderia mallei PRL-20]
 gi|254220001|gb|EET09385.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1710a]
          Length = 258

 Score =  210 bits (533), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 87/258 (33%), Positives = 134/258 (51%), Gaps = 1/258 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+  R  ++  W+ +++ D++CLQE K  D+ FP E L++  Y     GQK
Sbjct: 1   MRIATWNVNSLNVRKQHVLDWLAQSDVDVLCLQELKIPDEKFPREALEAAGYRSWFAGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAIL++       T +  +    +              +RI + Y P+G  + S K
Sbjct: 61  TYNGVAILARASLPFDETDIVRNIPGFEDAQQRLIAATIDG-VRIVSAYFPNGQALDSDK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W+     +    L+    L   GDYNI P+  D ++P  WE     + + R  F
Sbjct: 120 FVYKMQWLDALQAWLKDELQRYPKLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            +L  +GF DA R        +++WDY   ++ +N G+RIDHI+LSP       S  +D 
Sbjct: 180 AQLVALGFVDAFRRFEQPEKTFTWWDYRMLAFRRNAGLRIDHILLSPALAETCTSCTVDR 239

Query: 244 KPRGWTKPSDHTPVIVSL 261
            PR W +PSDHTPV+  L
Sbjct: 240 VPRTWEQPSDHTPVVAQL 257


>gi|149185250|ref|ZP_01863567.1| hypothetical protein ED21_19392 [Erythrobacter sp. SD-21]
 gi|148831361|gb|EDL49795.1| hypothetical protein ED21_19392 [Erythrobacter sp. SD-21]
          Length = 265

 Score =  210 bits (533), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 99/261 (37%), Positives = 149/261 (57%), Gaps = 1/261 (0%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + +AT+N+N I+AR+  L  W++E  P + CLQE KT D+ FP E  + + Y     G
Sbjct: 3   ASMKIATFNINGIKARLPRLLEWLEETRPTVACLQEIKTMDEGFPAEEFEKIGYQAIWHG 62

Query: 62  QKSYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           QKS+NGVAILS   +P+EI   L  D                   +RI NLYLP+GNP  
Sbjct: 63  QKSFNGVAILSDGTKPVEIQRGLDIDGPKEGEGEQARYLEAEVNGIRICNLYLPNGNPHP 122

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             K+D K++W+++     +Q    E P +  GD+N+IP+  D ++P    +DA    E R
Sbjct: 123 GPKFDYKLAWMEKLRGRMAQIWAEEVPAVVLGDFNVIPEDKDVWSPKAMASDALMQPESR 182

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            ++++    G+TDAI   +    ++++WDY A +W ++ G RIDH++LSPE    + SA 
Sbjct: 183 DAYRRFLANGWTDAIDTLNPRGGVWTYWDYQAGAWQRDHGFRIDHLLLSPETADRMVSAG 242

Query: 241 IDTKPRGWTKPSDHTPVIVSL 261
           +D + RG  K SDHTPV V L
Sbjct: 243 VDKEYRGREKSSDHTPVWVEL 263


>gi|300115398|ref|YP_003761973.1| exodeoxyribonuclease III [Nitrosococcus watsonii C-113]
 gi|299541335|gb|ADJ29652.1| exodeoxyribonuclease III [Nitrosococcus watsonii C-113]
          Length = 254

 Score =  210 bits (533), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 90/258 (34%), Positives = 141/258 (54%), Gaps = 5/258 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+R R   +  W++ + PD + LQETK  D+NFP E  + + YH    GQK
Sbjct: 1   MKIATWNVNSLRVRFSQVVDWLEIHQPDALALQETKLVDENFPQEAFKDIGYHAVYSGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAIL + +P +I+T LP      +         +    + + NLY+P+G+ + S K
Sbjct: 61  TYNGVAILCRQEPKDILTDLPNLVDSQRRIL-----GVTLDDIHVLNLYVPNGSEVGSEK 115

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W+ R   +  + L     LI  GD+N+ P   D Y+P +W      +   R++ 
Sbjct: 116 YAYKLDWLGRIKDYLQEALVEYPKLIVLGDFNVAPADQDVYDPEVWHETILCSTPEREAL 175

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q++  +GF D+ R        +S+WDY   ++ +N+G+RID I++S    S      ID 
Sbjct: 176 QEILALGFQDSFRLFEQQAQSFSWWDYRGGAFHRNRGLRIDLILISKALVSKCMGCVIDK 235

Query: 244 KPRGWTKPSDHTPVIVSL 261
           +PR   +PSDH PVI + 
Sbjct: 236 EPRRLPRPSDHAPVIATF 253


>gi|326316303|ref|YP_004233975.1| exodeoxyribonuclease III [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323373139|gb|ADX45408.1| exodeoxyribonuclease III [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 258

 Score =  210 bits (533), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 90/258 (34%), Positives = 139/258 (53%), Gaps = 1/258 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+  R+  + AW+ +N  D I LQE K  D+ FP +  ++  YH  T GQK
Sbjct: 1   MKLATWNVNSLSVRLPQVLAWLADNPVDAIGLQELKLVDEKFPHDAFEAAGYHAVTFGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAILS+    ++V ++PG +            T     LR  N Y  +G    + K
Sbjct: 61  TYNGVAILSRAPVRDVVRNIPGHEDAQARVIAATLDTPQGP-LRFINCYFVNGQAPGTEK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W+    R+  + L     L+  GD+N+ P+  D ++P+  ++    T+E R  F
Sbjct: 120 FAYKMLWLDALHRWVREELLAHPRLVLVGDFNVAPEDRDSFDPVGLKDTIHHTVEERTHF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q L  +G TDA R        +S+WDY    + KN+G+RIDHI++S      + +  ID 
Sbjct: 180 QSLLQLGLTDAYRMFDQPEKSFSWWDYRMLGFQKNRGLRIDHILVSEALRGQVTACTIDR 239

Query: 244 KPRGWTKPSDHTPVIVSL 261
           +PR   +PSDH PV+ +L
Sbjct: 240 QPRKNPQPSDHAPVVATL 257


>gi|282901543|ref|ZP_06309465.1| Exodeoxyribonuclease III xth [Cylindrospermopsis raciborskii
           CS-505]
 gi|281193586|gb|EFA68561.1| Exodeoxyribonuclease III xth [Cylindrospermopsis raciborskii
           CS-505]
          Length = 260

 Score =  210 bits (533), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 90/259 (34%), Positives = 138/259 (53%), Gaps = 2/259 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSIR R+  + +W+ ENN D++CLQETK  D +FP      + YH    GQK
Sbjct: 1   MKIATWNVNSIRTRLGQVISWLGENNVDVLCLQETKVIDTDFPLTVFHDMGYHTYIYGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT--QTLRIGNLYLPHGNPITS 121
           +YNGVA++S+     + T       +++  + +    I      +RI NLY+P+G+ + S
Sbjct: 61  AYNGVALISRQPMKSVSTGFCQVLENLEPEWDDQKRVITGIVDKVRIINLYVPNGSAVGS 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            KY  K+ W+     +    L+    +I  GD+NI  +  D Y  +  EN    +L  R+
Sbjct: 121 EKYQYKLQWLAVLKTYLEVLLKSNSDVIMCGDFNIALEDIDIYKQVDTENQIMASLLERK 180

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           + +++ N+GF D  R  +     YS+WDY   ++ +N G RIDH  L+        S  I
Sbjct: 181 ALREILNLGFGDGFRKFNSQGGNYSWWDYRTGAFKRNSGWRIDHHYLTDVLYKQAKSCLI 240

Query: 242 DTKPRGWTKPSDHTPVIVS 260
           D  PR   +PSDH PV+V 
Sbjct: 241 DISPRKLEQPSDHAPVVVE 259


>gi|159903026|ref|YP_001550370.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9211]
 gi|159888202|gb|ABX08416.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9211]
          Length = 277

 Score =  210 bits (533), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 95/273 (34%), Positives = 148/273 (54%), Gaps = 4/273 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSIR RI  + A++ E NPD++CLQETK ED +FP +  +  +YH+   GQK
Sbjct: 1   MLIATWNVNSIRTRISQVEAFLSEVNPDLLCLQETKVEDASFPTKIFEDKDYHLSFFGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT----INTQTLRIGNLYLPHGNPI 119
           +YNGVA++SK    ++   + G+  +                    +RI N+Y+P+G+ +
Sbjct: 61  AYNGVALISKSPLKDVRFGMSGELSNNPEAQYLDEQKRVISTLLNGVRIINVYVPNGSSL 120

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
           TS KY+ K+ W+     +   + E +EP+   GD+NI  +  D +NP         +   
Sbjct: 121 TSDKYEYKLQWLNCLKNYLDCQSERDEPICLLGDFNIALEDKDIHNPNRLSGGIMASEPE 180

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R++ +KL      D  R      + +S+WDY + +W +++G RIDHI LS E  +   S 
Sbjct: 181 RKALRKLLGERLEDIFRIFEQGTNHWSWWDYRSGAWDRDRGWRIDHIYLSKELINHSKSC 240

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQD 272
            I  K RG  KPSDH PV+V +D P     ++ 
Sbjct: 241 VIHKKSRGNIKPSDHAPVLVEIDWPSQESNEEP 273


>gi|320007613|gb|ADW02463.1| exodeoxyribonuclease III Xth [Streptomyces flavogriseus ATCC 33331]
          Length = 260

 Score =  210 bits (533), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 78/260 (30%), Positives = 129/260 (49%), Gaps = 1/260 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSI AR+  L AW++ +  D++C+QETK   + FP + L+   Y        
Sbjct: 1   MRIATWNVNSITARLPRLLAWLESSGTDVLCIQETKCTLEQFPTDALREAGYESAVNATG 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVA+LS+    ++VT LPG       +   A         R+ ++Y+P+G  +    
Sbjct: 61  RWNGVAVLSRVGLTDVVTGLPGGPEYDGVQEPRAVSATCGGA-RVWSVYVPNGREVAHEH 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W++      +       P    GDYNI P   D ++P ++E     T   R++ 
Sbjct: 120 YAYKLRWLEALREAVAADAAGTLPFAVLGDYNIAPTDEDVWDPAVFEGATHVTPAEREAL 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             L+  G +D +         YS+WDY   ++ KN+G+RID +  +    + +  + +D 
Sbjct: 180 AALRGTGLSDVVPRPLKYDRPYSYWDYRQLAFPKNRGMRIDLVYGNAPFAAAVKDSYVDR 239

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
           + R     SDH PV+V LD+
Sbjct: 240 EERKGKGASDHAPVVVDLDV 259


>gi|163851383|ref|YP_001639426.1| exodeoxyribonuclease III Xth [Methylobacterium extorquens PA1]
 gi|163662988|gb|ABY30355.1| exodeoxyribonuclease III Xth [Methylobacterium extorquens PA1]
          Length = 264

 Score =  210 bits (533), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 115/261 (44%), Positives = 162/261 (62%), Gaps = 3/261 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + TWNVNSI+ R+ +L  ++ E  PD++CLQE K +D +FP E +++  Y +ET GQK
Sbjct: 1   MRITTWNVNSIKQRVGHLLGFLDEAKPDVVCLQELKCQDASFPREEIEAAGYAVETLGQK 60

Query: 64  SYNGVAILSKYQPIEIV--THLPGDDLDVQARFIEATFTINTQ-TLRIGNLYLPHGNPIT 120
           +YNGVA+L +           LPGD  D QAR+IEA         +R+ ++YLP+GNP  
Sbjct: 61  AYNGVALLVRAPLQYTQLLRGLPGDAEDEQARYIEALVHGEGVAPVRVASIYLPNGNPAP 120

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             KY  K++++ R    A   +  EE L+ AGD+N+IP+P D  +P +W  DA F  E R
Sbjct: 121 GPKYSYKLAFMARLRSHARALMTTEEALVLAGDFNVIPEPEDAADPTVWTQDALFLPETR 180

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           ++F+ L   GFTD +RA   +  LY+FWDY A  W +N+GIRIDH++LSP+A   L SA 
Sbjct: 181 RAFRALLAEGFTDGLRACEPSAGLYTFWDYQAGCWPRNQGIRIDHLLLSPQAADRLVSAS 240

Query: 241 IDTKPRGWTKPSDHTPVIVSL 261
           +    RG  KPSDH PV V L
Sbjct: 241 VQRHLRGLEKPSDHVPVTVEL 261


>gi|218530191|ref|YP_002421007.1| exodeoxyribonuclease III Xth [Methylobacterium chloromethanicum
           CM4]
 gi|218522494|gb|ACK83079.1| exodeoxyribonuclease III Xth [Methylobacterium chloromethanicum
           CM4]
          Length = 264

 Score =  210 bits (533), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 115/261 (44%), Positives = 162/261 (62%), Gaps = 3/261 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + TWNVNSI+ R+ +L  ++ E  PD++CLQE K +D +FP E +++  Y +ET GQK
Sbjct: 1   MRITTWNVNSIKQRVGHLLGFLDEAKPDVVCLQELKCQDASFPREEIEAAGYAVETLGQK 60

Query: 64  SYNGVAILSKYQPIEIV--THLPGDDLDVQARFIEATFTINTQ-TLRIGNLYLPHGNPIT 120
           +YNGVA+L +           LPGD  D QAR+IEA         +R+ ++YLP+GNP  
Sbjct: 61  AYNGVALLVRAPLQYTQLLRGLPGDAEDEQARYIEALVHGEGVAPVRVASIYLPNGNPAP 120

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             KY  K++++ R    A   +  EE L+ AGD+N+IP+P D  +P +W  DA F  E R
Sbjct: 121 GPKYSYKLAFMARLRAHARALMTTEEALVLAGDFNVIPEPEDAADPSVWTQDALFLPEPR 180

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           ++F+ L   GFTD +RA   +  LY+FWDY A  W +N+GIRIDH++LSP+A   L SA 
Sbjct: 181 RAFRALLAEGFTDGLRACEPSAGLYTFWDYQAGCWPRNQGIRIDHLLLSPQAADRLVSAS 240

Query: 241 IDTKPRGWTKPSDHTPVIVSL 261
           +    RG  KPSDH PV V L
Sbjct: 241 VQRHLRGLEKPSDHVPVTVEL 261


>gi|238788459|ref|ZP_04632252.1| Exodeoxyribonuclease III [Yersinia frederiksenii ATCC 33641]
 gi|238723372|gb|EEQ15019.1| Exodeoxyribonuclease III [Yersinia frederiksenii ATCC 33641]
          Length = 271

 Score =  209 bits (532), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 86/271 (31%), Positives = 133/271 (49%), Gaps = 8/271 (2%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           M  +   ++N+N +RAR H LAA I+++ PD+I LQETK  D  FP E +    YH+   
Sbjct: 1   MLTMKFVSFNINGLRARPHQLAAIIEQHQPDVIGLQETKVHDDMFPLEDVSQHGYHVFYH 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           GQK + GVA+L+K +P+ +    P D+ D Q R I A       TL + N Y P G    
Sbjct: 61  GQKGHYGVALLTKQEPLAVRRGFPSDEEDAQRRIIMADIATPQGTLTVINGYFPQGESRD 120

Query: 121 ST-KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDA 173
              K+  K  +     ++  Q+L  +  ++  GD NI P         +     +     
Sbjct: 121 HPTKFPAKERFYADLQQYLEQQLSADAQILIMGDLNISPTDLDIGIGEESRKRWLRTGKC 180

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
            F  E R   ++LQ+ G  D  RA +   +  +S++DY +  + +N+G+RID ++ S   
Sbjct: 181 SFLPEERAWLERLQSWGLVDTFRAANPDCNDQFSWFDYRSRGFDENRGLRIDLLLASQPL 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            +   +  ID K RG  KPSDH PV     +
Sbjct: 241 AARCIATGIDYKIRGMEKPSDHAPVWSEFAL 271


>gi|260220884|emb|CBA28896.1| hypothetical protein Csp_A09430 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 257

 Score =  209 bits (532), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 83/258 (32%), Positives = 134/258 (51%), Gaps = 5/258 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+NS+  R+  +  W+  N  D++ LQE K  D  FP +  +++ YH +  GQK
Sbjct: 1   MKLATWNINSLGVRLPQVLDWLAANPVDVLALQELKLTDDKFPADAFEAIGYHAQWFGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVA+LS+    +++ ++PG D D+         T     +R+   Y P+G    S K
Sbjct: 61  TYNGVALLSRTPASDVIKNIPGFDDDMSRVI-----TGTVDGVRVIGAYFPNGQEPGSDK 115

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           ++ K+ W+    R+    L     L+  GDYNI     D ++P+  E     T E R   
Sbjct: 116 FEYKMEWLSALRRWVKDELATHPNLVLMGDYNITFDEDDVWDPVNLEGTIHCTEEERYHL 175

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + L  +G  D+ R        +S+WDY    + +N+G+RIDHI++S      + +  ID 
Sbjct: 176 RALIALGLCDSYRLFPYPPKSFSWWDYRDAGFRRNRGLRIDHILVSNALKPQVTACTIDK 235

Query: 244 KPRGWTKPSDHTPVIVSL 261
            PR   +PSDH PV+V +
Sbjct: 236 TPRKNERPSDHAPVVVDI 253


>gi|240138546|ref|YP_002963018.1| Exodeoxyribonuclease III (Exonuclease III) (EXO III) (AP
           endonuclease VI) [Methylobacterium extorquens AM1]
 gi|240008515|gb|ACS39741.1| Exodeoxyribonuclease III (Exonuclease III) (EXO III) (AP
           endonuclease VI) [Methylobacterium extorquens AM1]
          Length = 264

 Score =  209 bits (532), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 115/261 (44%), Positives = 162/261 (62%), Gaps = 3/261 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + TWNVNSI+ R+ +L  ++ E  PD++CLQE K +D +FP E +++  Y +ET GQK
Sbjct: 1   MRITTWNVNSIKQRVGHLLGFLDEAKPDVVCLQELKCQDASFPREEIEAAGYAVETLGQK 60

Query: 64  SYNGVAILSKYQPIEIV--THLPGDDLDVQARFIEATFTINTQ-TLRIGNLYLPHGNPIT 120
           +YNGVA+L +           LPGD  D QAR+IEA         +R+ ++YLP+GNP  
Sbjct: 61  AYNGVALLVRAPLQYTQLLRGLPGDAEDEQARYIEALVHGEGVAPVRVASIYLPNGNPAP 120

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             KY  K++++ R    A   +  EE L+ AGD+N+IP+P D  +P +W  DA F  E R
Sbjct: 121 GPKYSYKLAFMARLRSHARALMTTEEALVLAGDFNVIPEPEDAADPSVWTQDALFLPETR 180

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           ++F+ L   GFTD +RA   +  LY+FWDY A  W +N+GIRIDH++LSP+A   L SA 
Sbjct: 181 RAFRALLAEGFTDGLRACEPSAGLYTFWDYQAGCWPRNQGIRIDHLLLSPQAADRLVSAS 240

Query: 241 IDTKPRGWTKPSDHTPVIVSL 261
           +    RG  KPSDH PV V L
Sbjct: 241 VQRHLRGLEKPSDHVPVTVEL 261


>gi|37680518|ref|NP_935127.1| exonuclease III [Vibrio vulnificus YJ016]
 gi|37199266|dbj|BAC95098.1| exodeoxyribonuclease III [Vibrio vulnificus YJ016]
          Length = 268

 Score =  209 bits (532), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 84/268 (31%), Positives = 138/268 (51%), Gaps = 9/268 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +RAR+H L A I ++ PD+I LQE K  D+ FP E ++++ Y +   GQK
Sbjct: 1   MKIVSFNINGLRARLHQLQALIDKHQPDVIGLQEIKVHDEAFPIEDVEAMGYKVYFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITS- 121
           ++ GVA+L K +PIEI    P D+ + Q R I  TF     + + + N Y P G+ I   
Sbjct: 61  AHYGVALLCKQEPIEIQKGFPTDNDEHQKRMIIGTFLDEKGEKVTVLNGYFPQGDNIAHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175
           TK+  K  + +  + + +   +  E ++  GD NI P   D           +      F
Sbjct: 121 TKFPYKRQFYQDLMGYLTTHRDNGEQVVVMGDINISPIDADIGIGEVNRKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R+  Q L + G  D  R  H +    +S++DY +  +  N+G+RID I+ +P   +
Sbjct: 181 QPEEREWLQTLLDWGLEDTFRKLHPSVDDKFSWFDYRSKGFDDNRGLRIDVILATPSLAT 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
               + ID + RG  KPSDH P+  + +
Sbjct: 241 KCRESDIDYELRGIEKPSDHAPIWATFE 268


>gi|288549534|ref|ZP_05967343.2| exodeoxyribonuclease III [Enterobacter cancerogenus ATCC 35316]
 gi|288318297|gb|EFC57235.1| exodeoxyribonuclease III [Enterobacter cancerogenus ATCC 35316]
          Length = 354

 Score =  209 bits (532), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 81/270 (30%), Positives = 126/270 (46%), Gaps = 8/270 (2%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + +   ++N+N +RAR H L A ++++ PD+I LQETK  D  FP E +  L Y++   G
Sbjct: 85  ATMKFVSFNINGLRARPHQLEAIVEQHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHG 144

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           QK + GVA+L+K  P+ +    PGDD + Q R I A        + + N Y P G     
Sbjct: 145 QKGHYGVALLTKETPVSVRRGFPGDDGEAQRRIIMAEIPSPLGNITVINGYFPQGESRDH 204

Query: 122 T-KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDAC 174
             K+  K  + +    + +  L  E P++  GD NI P         +     +      
Sbjct: 205 PTKFPAKAKFYQDLQDYLTAELNKENPVLIMGDVNISPTDLDIGIGEESRKRWLRTGKCS 264

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
           F  E R+  ++L   G  D  RA +      +S++DY +  +  N+G+RID ++ S    
Sbjct: 265 FLPEEREWMERLIGWGLVDTFRAANPDTQDRFSWFDYRSKGFDDNRGLRIDLLLASAPLA 324

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                  ID   RG  KPSDH PV     +
Sbjct: 325 ERCIETGIDYDIRGMEKPSDHAPVWAKFKL 354


>gi|53719925|ref|YP_108911.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei K96243]
 gi|167824992|ref|ZP_02456463.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 9]
 gi|226195468|ref|ZP_03791056.1| exodeoxyribonuclease III [Burkholderia pseudomallei Pakistan 9]
 gi|52210339|emb|CAH36318.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei K96243]
 gi|225932428|gb|EEH28427.1| exodeoxyribonuclease III [Burkholderia pseudomallei Pakistan 9]
          Length = 258

 Score =  209 bits (532), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 87/258 (33%), Positives = 134/258 (51%), Gaps = 1/258 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+  R  ++  W+ +++ D++CLQE K  D+ FP E L++  Y     GQK
Sbjct: 1   MRIATWNVNSLNVRKQHVLDWLAQSDVDVLCLQELKIPDEKFPREALEAAGYRSWFAGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAIL++       T +  +    +              +RI + Y P+G  + S K
Sbjct: 61  TYNGVAILARASLPFDETDIVRNIPGFEDAQQRLIAATIDG-VRIVSAYFPNGQALDSDK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W+     +    L+    L   GDYNI P+  D ++P  WE     + + R  F
Sbjct: 120 FVYKMQWLDALRAWLKDELQRYPKLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            +L  +GF DA R        +++WDY   ++ +N G+RIDHI+LSP       S  +D 
Sbjct: 180 AQLVALGFVDAFRRFEQPEKTFTWWDYRMLAFRRNAGLRIDHILLSPALAETCTSCTVDR 239

Query: 244 KPRGWTKPSDHTPVIVSL 261
            PR W +PSDHTPV+  L
Sbjct: 240 VPRTWEQPSDHTPVVAQL 257


>gi|254389480|ref|ZP_05004707.1| exonuclease [Streptomyces clavuligerus ATCC 27064]
 gi|326444199|ref|ZP_08218933.1| exodeoxyribonuclease III [Streptomyces clavuligerus ATCC 27064]
 gi|197703194|gb|EDY49006.1| exonuclease [Streptomyces clavuligerus ATCC 27064]
          Length = 259

 Score =  209 bits (532), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 77/260 (29%), Positives = 128/260 (49%), Gaps = 1/260 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+ AR+  L AW++ +  D++C+QETK  ++ FP E L+ + Y        
Sbjct: 1   MRIATWNVNSVTARLPRLLAWLESSGTDVLCIQETKCAEEQFPAEELREIGYESAIHADG 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVA++S+    E+V  LPG      A+   A        +R+ ++Y+P+G  +T   
Sbjct: 61  RWNGVALVSRVGLDEVVKGLPGGPAYDGAQEPRAISATCGP-VRLWSVYVPNGREVTHDH 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W+       +       P    GDYNI P   D ++   +E     T   R + 
Sbjct: 120 YAYKLEWLAALKEAVAADAAGPRPFAVLGDYNIAPADEDVWDRAAFEGSTHVTEPERAAL 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             L+  G +D +       H +++WDY    + KN+G+RID +  +      +  + +D 
Sbjct: 180 AALRETGLSDVVPRPLKYDHPFTYWDYRQLCFPKNRGMRIDLVYGNGPFAGAVKDSYVDR 239

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
           + R     SDH PV+V LD+
Sbjct: 240 EERKGKGASDHAPVVVDLDV 259


>gi|256784140|ref|ZP_05522571.1| exonuclease [Streptomyces lividans TK24]
 gi|289768021|ref|ZP_06527399.1| exodeoxyribonuclease III [Streptomyces lividans TK24]
 gi|289698220|gb|EFD65649.1| exodeoxyribonuclease III [Streptomyces lividans TK24]
          Length = 259

 Score =  209 bits (532), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 77/260 (29%), Positives = 124/260 (47%), Gaps = 1/260 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSI AR+  L AW++ +  D++CLQE K  +  FPF+ L+   Y        
Sbjct: 1   MRIATWNVNSITARLPRLLAWLESSGTDVLCLQEAKVAEAQFPFDALREAGYEAAVHATG 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVA+LS+    ++V  LPGD      +   A        +R+ ++Y+P+G  +    
Sbjct: 61  RWNGVAVLSRVGLEDVVKGLPGDPGYEGVQEPRAISATCGP-VRVWSVYVPNGREVDHPH 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W +              P    GDYN+ P   D Y+   +E     T   R + 
Sbjct: 120 YAYKLQWFEVLRAAVEGDAAGGRPFAVLGDYNVAPTDDDVYDRAAFEGATHVTPAERAAL 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             L+  G +D +       H +++WDY    + KN+G+RID +  +      +  + +D 
Sbjct: 180 ASLRGAGLSDVVPRPLKYDHPFTYWDYRQLCFPKNRGMRIDLVYGNEPFAKAVTDSYVDR 239

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
           + R     SDH PV+V LD+
Sbjct: 240 EERKGKGASDHAPVVVDLDL 259


>gi|27365439|ref|NP_760967.1| exonuclease III [Vibrio vulnificus CMCP6]
 gi|27361587|gb|AAO10494.1| exodeoxyribonuclease III [Vibrio vulnificus CMCP6]
          Length = 268

 Score =  209 bits (532), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 85/268 (31%), Positives = 138/268 (51%), Gaps = 9/268 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +RAR+H L A I ++ PD+I LQE K  D+ FP E ++++ Y +   GQK
Sbjct: 1   MKIVSFNINGLRARLHQLQALIDKHQPDVIGLQEIKVHDEAFPVEDVEAMGYKVYFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITS- 121
           ++ GVA+L K +PIEI    P D+ + Q R I  TF     + + + N Y P G+ I   
Sbjct: 61  AHYGVALLCKQEPIEIQKGFPTDNDEHQKRMIIGTFLDEKGEKVTVLNGYFPQGDNIAHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175
           TK+  K  + K  + + +   +  E ++  GD NI P   D           +      F
Sbjct: 121 TKFPYKRQFYKDLMGYLTTHRDNGEQVVVMGDINISPIDADIGIGEVNRKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R+  Q L + G  D  R  H +    +S++DY +  +  N+G+RID I+ +P   +
Sbjct: 181 QPEEREWLQTLLDWGLEDTFRKLHPSVDDKFSWFDYRSKGFDDNRGLRIDVILATPSLAA 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
               + ID + RG  KPSDH P+  + +
Sbjct: 241 QCRESDIDYELRGIEKPSDHAPIWATFE 268


>gi|296165787|ref|ZP_06848295.1| exodeoxyribonuclease III [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295898860|gb|EFG78358.1| exodeoxyribonuclease III [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 322

 Score =  209 bits (532), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 76/267 (28%), Positives = 124/267 (46%), Gaps = 7/267 (2%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           S + +ATWNVNSIR+R+  +  W+   + D++ +QETK  D  FP      L Y +   G
Sbjct: 53  SPLRLATWNVNSIRSRLPRVVDWLARADVDVLAMQETKCSDGQFPTLPFFELGYEVAHVG 112

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-----TQTLRIGNLYLPHG 116
              +NGVAI S+    ++     G         + AT            +RI +LY+P+G
Sbjct: 113 FNQWNGVAIASRVGLDDVRVGFDGQPSWSSKPEVAATAEARALGATCDGVRIWSLYVPNG 172

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEE--PLIFAGDYNIIPQPHDCYNPIIWENDAC 174
             +    Y  K+ W+      A+  L  +    +  AGD+NI P   D ++   +     
Sbjct: 173 RALGDPHYTYKLEWLAALRDTAAGWLRDDPAAQIALAGDWNIAPTDDDVWSTEFYAGATH 232

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
            +   R++F  + +  FTD +R       +Y++WDY    + K +G+RID I+ SP    
Sbjct: 233 VSEPERRAFAAIVDAQFTDVVRPFAPGPGVYTYWDYTQLRFPKRQGMRIDFILASPALAD 292

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261
            +  A+I  + R     SDH PV + +
Sbjct: 293 RVTDAQIVREERKGKAASDHAPVQIDI 319


>gi|186682991|ref|YP_001866187.1| exodeoxyribonuclease III [Nostoc punctiforme PCC 73102]
 gi|186465443|gb|ACC81244.1| exodeoxyribonuclease III [Nostoc punctiforme PCC 73102]
          Length = 260

 Score =  209 bits (532), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 93/260 (35%), Positives = 137/260 (52%), Gaps = 2/260 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSIR R+  +  W+  N  D++CLQETK  D  FP    + L Y++   GQK
Sbjct: 1   MKIATWNVNSIRTRLEQVTDWLTNNPVDVLCLQETKVADAEFPRSPFEQLGYNLYISGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT--LRIGNLYLPHGNPITS 121
           SYNGVA++S+   + + +       D+   + E    I      +RI NLY+P+G  + +
Sbjct: 61  SYNGVALISRQPLLNVSSGFRAILPDLHHEWDEQKRVITGVIDGVRIVNLYVPNGAAVGT 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            KY+ K+ W+     +       E  +   GD+NI  +  D +  +  EN    T   RQ
Sbjct: 121 EKYEYKLRWLTALHEYLRVLALSEPAICVCGDFNIALEDKDIHEQVSTENHIMATETERQ 180

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           + +++  +GF DA R        YS+WDY A ++ +N G RIDH  L+P       S  I
Sbjct: 181 ALREILQLGFADAFRKFTTEGGNYSWWDYRAAAFRRNLGWRIDHHYLTPVLYERATSCII 240

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
           D +PR  T+PSDHTPVIV  
Sbjct: 241 DAEPRKSTQPSDHTPVIVEF 260


>gi|257069696|ref|YP_003155951.1| Exodeoxyribonuclease III [Brachybacterium faecium DSM 4810]
 gi|256560514|gb|ACU86361.1| Exodeoxyribonuclease III [Brachybacterium faecium DSM 4810]
          Length = 266

 Score =  209 bits (532), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 75/266 (28%), Positives = 136/266 (51%), Gaps = 6/266 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+NS+RAR+  + A+++ ++ D++ LQETK + +      LQ   Y +   G  
Sbjct: 1   MRIATWNINSLRARMDRVLAFLERHDVDVLALQETKAKPQQLDLTALQEAGYEVAAHGLN 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT----INTQTLRIGNLYLPHGNPI 119
            +NGVA++S+    ++ T LP   L  +             +    LRI +LY+P+G  +
Sbjct: 61  QWNGVALISRVGLSDVRTELPALPLWPEDETGVVEARALGGLVGDGLRIWSLYIPNGREL 120

Query: 120 TSTKYDDKISWIKRFLRFASQRLELE--EPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
               YD K+ W++      ++ L  +    +   GD+N+ P   D ++   ++     + 
Sbjct: 121 DHPHYDYKLRWLEALRAEGARELAEDLSAKVALVGDFNVAPLDEDVWDMEFFDGKTHVSE 180

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
             R +F+ + + G+ D +R  H    +Y++WDY    + K +G+RID ++ SP   S + 
Sbjct: 181 PERAAFRAVVDAGYADVVRGDHPGPGVYTYWDYQQLRFPKRQGMRIDFVLGSPSVQSAVT 240

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263
            + ID + R     SDH PV+V LD+
Sbjct: 241 GSFIDREERKGKGASDHAPVVVDLDL 266


>gi|124022407|ref|YP_001016714.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9303]
 gi|123962693|gb|ABM77449.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9303]
          Length = 279

 Score =  209 bits (532), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 90/272 (33%), Positives = 141/272 (51%), Gaps = 4/272 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSIR R+  + AW+++  PD++CLQETK +D  FP E  ++  Y +   GQK
Sbjct: 1   MQIATWNVNSIRTRLDQVQAWLQDAQPDLLCLQETKVDDPLFPHEVFEAQGYQVHFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN----TQTLRIGNLYLPHGNPI 119
           +YNGVAI+S+    ++     G+  +                    +RI N+Y+P+G+ +
Sbjct: 61  AYNGVAIVSRQPLEDVRRGFTGELPEDAEALQLGEQKRVISALVNNIRIVNVYVPNGSAL 120

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
            S KY  K+ W+    R+ S + + +EPL   GD+NI  +  D ++P         +   
Sbjct: 121 KSEKYPYKLEWLSCLNRYLSAQAKRDEPLCLVGDFNIALEARDIHHPERLTGGIMASELE 180

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R++  K+      D  R      + +S+WDY + +W +++G RIDHI L  E  S   S 
Sbjct: 181 REALLKVLGDRLHDVFRVFEPDANHWSWWDYRSGAWDRDQGWRIDHIYLCDELLSQARSC 240

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271
            I    RG  KPSDH PV V L+ P     ++
Sbjct: 241 VIHKHLRGHEKPSDHAPVTVDLNWPPIDDDEE 272


>gi|30248054|ref|NP_840124.1| exodeoxyribonuclease III:exodeoxyribonuclease III xth [Nitrosomonas
           europaea ATCC 19718]
 gi|30179939|emb|CAD83934.1| Exodeoxyribonuclease III:Exodeoxyribonuclease III xth [Nitrosomonas
           europaea ATCC 19718]
          Length = 254

 Score =  209 bits (532), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 94/258 (36%), Positives = 139/258 (53%), Gaps = 5/258 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS++ R+  +  W+  N PDI+CLQETK +D+ FP + +    Y     GQK
Sbjct: 1   MKIATWNVNSLKVRLQQVIDWLNLNQPDILCLQETKLQDEFFPMDAIAQAGYRSIYIGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVA+LSK    +I T LPG D   +              LR+   Y+P+G  + S K
Sbjct: 61  TYNGVALLSKETGEDICTALPGFDDMQKRLIAATYGD-----LRVICAYVPNGEHVDSEK 115

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W+ +  RF  Q+      +   GD+NI P+  D Y+P  W      +   RQ+F
Sbjct: 116 YIYKLEWLSQLNRFLQQQRACYGKVALLGDFNIAPEDRDVYDPEAWRGQVLCSEPERQAF 175

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + L + GF D+          Y++WDY   ++ +N+G+RIDHI+LS E        ++D 
Sbjct: 176 RGLLDTGFVDSFHLFEQPEKTYTWWDYRMMAFRRNRGLRIDHILLSHEMADRCTIWQVDK 235

Query: 244 KPRGWTKPSDHTPVIVSL 261
            PR   +PSDH PV+V L
Sbjct: 236 LPRKLERPSDHAPVLVEL 253


>gi|239927938|ref|ZP_04684891.1| exonuclease [Streptomyces ghanaensis ATCC 14672]
 gi|291436275|ref|ZP_06575665.1| exonuclease [Streptomyces ghanaensis ATCC 14672]
 gi|291339170|gb|EFE66126.1| exonuclease [Streptomyces ghanaensis ATCC 14672]
          Length = 259

 Score =  209 bits (532), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 80/260 (30%), Positives = 127/260 (48%), Gaps = 1/260 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSI AR+  L AW++ +  D++CLQE K  +  FPFE L+ L Y        
Sbjct: 1   MRIATWNVNSITARLPRLLAWLESSGTDVLCLQEAKVAEDRFPFEELRELGYESAVNATG 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVA+LS+    ++V  LPGD     +    A        +R+ ++Y+P+G  +    
Sbjct: 61  RWNGVALLSRVGLEDVVKGLPGDPGYEGSEEPRAVSATCGP-VRVWSVYVPNGREVDHPH 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W +      +     E P    GDYN+ P   D Y+   +E     T   R + 
Sbjct: 120 YAYKLQWFEALKAAVAGDAAGERPFAVLGDYNVAPTDDDVYDRAAFEGLTHVTPAERAAL 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             L+  G +D +       H +++WDY    + KN+G+RID +  +      +  + +D 
Sbjct: 180 ASLRETGLSDIVPRPLKYEHPFTYWDYRQLCFPKNRGMRIDLVYGNAPFAKAVTDSYVDR 239

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
           + R     SDH PV+V LD+
Sbjct: 240 EERKGKGASDHAPVVVDLDL 259


>gi|238797343|ref|ZP_04640843.1| Exodeoxyribonuclease III [Yersinia mollaretii ATCC 43969]
 gi|238718774|gb|EEQ10590.1| Exodeoxyribonuclease III [Yersinia mollaretii ATCC 43969]
          Length = 271

 Score =  209 bits (532), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 83/271 (30%), Positives = 131/271 (48%), Gaps = 8/271 (2%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           M  +   ++N+N +RAR H LAA I+++ PD+I LQETK  D  FP E +    YH+   
Sbjct: 1   MLTMKFVSFNINGLRARPHQLAAIIEQHQPDVIGLQETKVHDDMFPLEDVSQHGYHVFYH 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           GQK + GVA+L+K +P+ +    P D+ D Q R I A        L + N Y P G    
Sbjct: 61  GQKGHYGVALLTKEKPLAVRRGFPTDEEDAQRRIIMADIATPQGPLTVINGYFPQGESRD 120

Query: 121 STK-YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDA 173
               +  K  +     ++  Q+L  +  ++  GD NI P         +     +     
Sbjct: 121 HPIKFPAKERFYADLQQYLEQQLSADSQVLIMGDINISPTDLDIGIGEENRKRWLRTGKC 180

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
            F  E R   ++LQ+ G  D  RA +   +  +S++DY +  + +N+G+RID ++ S   
Sbjct: 181 SFLPEERAWLERLQSWGLVDTFRAANPDCNDQFSWFDYRSRGFDENRGLRIDLLLASQPL 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            +   +  ID + RG  KPSDH PV     +
Sbjct: 241 AARCIATGIDYEIRGMEKPSDHAPVWSEFAL 271


>gi|167837200|ref|ZP_02464083.1| exodeoxyribonuclease III [Burkholderia thailandensis MSMB43]
          Length = 258

 Score =  209 bits (531), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 85/258 (32%), Positives = 135/258 (52%), Gaps = 1/258 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+  R  ++  W+ +++ D++CLQE K  D+ FP E L++  Y     GQK
Sbjct: 1   MKIATWNVNSLNVRKQHVLDWLAQSDVDVLCLQELKIPDEKFPREALEAAGYRSWFAGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAIL++ +       +  +    +              +RI + Y P+G  + S K
Sbjct: 61  TYNGVAILARARLPFDEADVVRNIPGFEDSQQRLIAATIDG-VRIVSAYFPNGQALDSEK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W+     +  + L+    L   GDYNI P+  D ++P  WE     + + R  F
Sbjct: 120 FVYKMQWLDALQAWLKRELQRYPKLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            +L  +GF DA R        +++WDY   ++ +N G+RIDHI+LSP       S  +D 
Sbjct: 180 AQLVALGFVDAFRRFDQPEKTFTWWDYRMLAFRRNAGLRIDHILLSPALAETCTSCTVDR 239

Query: 244 KPRGWTKPSDHTPVIVSL 261
            PR W +PSDHTPV+  +
Sbjct: 240 VPRTWEQPSDHTPVVAQI 257


>gi|197285354|ref|YP_002151226.1| exodeoxyribonuclease III [Proteus mirabilis HI4320]
 gi|194682841|emb|CAR43141.1| exodeoxyribonuclease III [Proteus mirabilis HI4320]
          Length = 268

 Score =  209 bits (531), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 85/268 (31%), Positives = 126/268 (47%), Gaps = 8/268 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A ++++ PD+I LQETK  D  FP ET+ +L YH+   GQK
Sbjct: 1   MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLETVSALGYHVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122
            + GVA+L+K +P+ +    PGD  + Q R I A        L + N Y P G      T
Sbjct: 61  GHYGVALLTKAKPVAVRKGFPGDGEEAQRRMIMADIETPAGLLTVMNGYFPQGESRDHET 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACFT 176
           K+  K  +     ++ +  L    P++  GD NI P         +     +      F 
Sbjct: 121 KFPAKAKFYADLQQYLTTSLTPSSPVLIMGDLNISPTDKDIGIGENNMKRWLKMGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+    L   G TD  RA H      +S++DY +  +  N+G+RID ++ S      
Sbjct: 181 PEEREWLATLMGWGLTDTYRAQHPEVEDQFSWFDYRSKGFDDNRGLRIDLLLASRCLADN 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             S  ID   R   KPSDH PV     +
Sbjct: 241 CISTGIDYDIRAMEKPSDHAPVWAEFKL 268


>gi|323135771|ref|ZP_08070854.1| exodeoxyribonuclease III [Methylocystis sp. ATCC 49242]
 gi|322398862|gb|EFY01381.1| exodeoxyribonuclease III [Methylocystis sp. ATCC 49242]
          Length = 269

 Score =  209 bits (531), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 114/259 (44%), Positives = 159/259 (61%), Gaps = 1/259 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + VATWNVNS+R R+  L A++KE  PDI+CLQE K ED  FP   ++   Y++   GQK
Sbjct: 9   LRVATWNVNSVRQRLSPLLAFLKETAPDILCLQELKCEDHAFPRSEIEDAGYNVVVHGQK 68

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122
           ++NGVAILS     E    LPG D + Q+R++EA         LR+ ++Y P+GNP  + 
Sbjct: 69  TFNGVAILSNRPIEETTIGLPGFDGEAQSRYVEAVISDGAGGVLRVASIYAPNGNPPDTP 128

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           KY  K+++++   R A+  L LEE  I AGDYN+IP+  D ++P  W  DA F  + R +
Sbjct: 129 KYTYKLAFMEALTRHAADLLRLEEVTILAGDYNVIPEARDVHDPAAWIGDALFMPQSRAA 188

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
            Q++ N+G+TDA+RA  D   LY+FWDY A +W KN+G+RIDH++LSP A   L    I 
Sbjct: 189 LQRVINLGYTDALRAVTDEPGLYTFWDYQAGAWQKNRGLRIDHLLLSPRAADRLAGVEIH 248

Query: 243 TKPRGWTKPSDHTPVIVSL 261
              R   KPSDH  +   L
Sbjct: 249 KSMRAGEKPSDHVAISAEL 267


>gi|320155825|ref|YP_004188204.1| exodeoxyribonuclease III [Vibrio vulnificus MO6-24/O]
 gi|319931137|gb|ADV86001.1| exodeoxyribonuclease III [Vibrio vulnificus MO6-24/O]
          Length = 268

 Score =  209 bits (531), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 85/268 (31%), Positives = 138/268 (51%), Gaps = 9/268 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +RAR+H L A I ++ PD+I LQE K  D+ FP E ++++ Y +   GQK
Sbjct: 1   MKIVSFNINGLRARLHQLQALIDKHQPDVIGLQEIKVHDEAFPVEDVEAMGYKVYLHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITS- 121
           ++ GVA+L K +PIEI    P D+ + Q R I  TF     + + + N Y P G+ I   
Sbjct: 61  AHYGVALLCKQEPIEIQKGFPTDNDEHQKRMIIGTFLDEKGEKVTVLNGYFPQGDNIAHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175
           TK+  K  + K  + + +   +  E ++  GD NI P   D           +      F
Sbjct: 121 TKFPYKRQFYKDLMGYLTTHRDNGEQVVVMGDINISPIDADIGIGEVNRKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R+  Q L + G  D  R  H +    +S++DY +  +  N+G+RID I+ +P   +
Sbjct: 181 QPEEREWLQTLLDWGLEDTFRKLHPSVDDKFSWFDYRSKGFDDNRGLRIDVILATPSLAA 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
               + ID + RG  KPSDH P+  + +
Sbjct: 241 KCRESDIDYELRGIEKPSDHAPIWATFE 268


>gi|326317822|ref|YP_004235494.1| exodeoxyribonuclease III Xth [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323374658|gb|ADX46927.1| exodeoxyribonuclease III Xth [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 302

 Score =  209 bits (531), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 116/269 (43%), Positives = 163/269 (60%), Gaps = 6/269 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+NVNSIRAR+  L  W++E  P + CLQE K  D  FP E +++  Y     GQK
Sbjct: 1   MKIATFNVNSIRARLPALLQWLQETRPGVACLQELKCTDDAFPAEEIRAAGYGALWHGQK 60

Query: 64  SYNGVAILSKY-QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           ++NGVAIL++  +PIE+   LPGD  D Q+R++EA        + +  LYLP+GNP    
Sbjct: 61  AWNGVAILARGAEPIEVQRGLPGDAADTQSRYLEAAVDG----VLVACLYLPNGNPAPGP 116

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           K+D K++W+ R  R A       EP++ AGD+NIIP   D Y P  W  DA F  EVR +
Sbjct: 117 KFDYKLAWLGRLARRADVLRSRPEPVVLAGDFNIIPTERDVYKPDAWVEDALFRTEVRDA 176

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F+ L + G+TDA+RA H    +Y+FWDY    + +N G+RIDH++L+P A   L  A +D
Sbjct: 177 FRALVDSGWTDALRAVHPGETVYTFWDYLRQRFQRNAGLRIDHLLLNPAAARRLQDAGVD 236

Query: 243 TKPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271
              RG  +PSDH P    L  PEP+K++ 
Sbjct: 237 RDVRGRARPSDHAPAWAVLA-PEPQKRRP 264


>gi|160900429|ref|YP_001566011.1| exodeoxyribonuclease III [Delftia acidovorans SPH-1]
 gi|160366013|gb|ABX37626.1| exodeoxyribonuclease III [Delftia acidovorans SPH-1]
          Length = 258

 Score =  209 bits (531), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 95/258 (36%), Positives = 144/258 (55%), Gaps = 1/258 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+  R+  + AW++ N  D + LQE K  D  FP + LQ   YH  + GQK
Sbjct: 1   MQIATWNVNSLSVRLPQVLAWLQANPVDALALQELKLTDDKFPLQALQEAGYHAVSHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVA L++    ++V ++PG D D QAR I AT       +R+ N Y  +G    + K
Sbjct: 61  TYNGVAWLTRTPVRDVVRNIPGLD-DEQARIIAATLDAEGGPVRLINGYFVNGQAPGTDK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W++    +    + +   L+  GD+N+ P+  D Y+PI  ++    T+E R  F
Sbjct: 120 FAYKMRWLQALQDWVKSEMAIHPRLVLVGDFNVAPEDRDSYDPIGLKDTIHHTVEERTHF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q L  +G TDA R        YS+WDY    + KN+G+RIDHI++S      + +  +D 
Sbjct: 180 QALLQLGLTDAFRMFDQPEKSYSWWDYRMLGFQKNRGLRIDHILVSEALRPSVSACSVDR 239

Query: 244 KPRGWTKPSDHTPVIVSL 261
            PR   +PSDH PV+V+L
Sbjct: 240 APRKNPQPSDHAPVVVTL 257


>gi|120610134|ref|YP_969812.1| exodeoxyribonuclease III [Acidovorax citrulli AAC00-1]
 gi|120588598|gb|ABM32038.1| exodeoxyribonuclease III [Acidovorax citrulli AAC00-1]
          Length = 258

 Score =  209 bits (531), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 90/258 (34%), Positives = 139/258 (53%), Gaps = 1/258 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+  R+  + AW+ +N  D I LQE K  D+ FP +  +S  YH  + GQK
Sbjct: 1   MKLATWNVNSLSIRLPQVLAWLADNPVDAIGLQELKLVDEKFPHDAFESAGYHAVSFGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAILS+    ++V ++PG +            T     LR  N Y  +G    + K
Sbjct: 61  TYNGVAILSRTPVRDVVRNIPGHEDTQARVIAATLDTPQGP-LRFINCYFVNGQAPGTEK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W+    R+  + L     L+  GD+N+ P+  D ++P+  ++    T+E R  F
Sbjct: 120 FAYKMLWLAALHRWVREELLAHPRLVLVGDFNVAPEDRDSFDPVGLKDTIHHTVEERTHF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q L  +G TDA R        +S+WDY    + KN+G+RIDHI++S      + +  ID 
Sbjct: 180 QSLLQLGLTDAYRMFEQPEKSFSWWDYRMLGFQKNRGLRIDHILVSEALRGQVTACTIDR 239

Query: 244 KPRGWTKPSDHTPVIVSL 261
           +PR   +PSDH PV+ +L
Sbjct: 240 QPRKNPQPSDHAPVVATL 257


>gi|253989463|ref|YP_003040819.1| exonuclease III [Photorhabdus asymbiotica subsp. asymbiotica ATCC
           43949]
 gi|253780913|emb|CAQ84075.1| exodeoxyribonuclease iii (exonuclease iii) (exo iii) (ap
           endonucleas vi) [Photorhabdus asymbiotica]
          Length = 268

 Score =  209 bits (531), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 85/268 (31%), Positives = 127/268 (47%), Gaps = 8/268 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H LAA ++ + PD+I LQETK  D+ FP E +  L YH+   GQK
Sbjct: 1   MKFISFNINGLRARPHQLAAIVELHQPDVIGLQETKVHDELFPLEEVNKLGYHVFYYGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122
           ++ GVA+L++  PI +    PGDD D Q R I A        L + N Y P G       
Sbjct: 61  AHYGVALLTRQAPIAVHRGFPGDDEDSQRRIIMADLETPHGLLTVINGYFPQGESRDHPV 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE------NDACFT 176
           K+  K  + +    +  Q L  +  ++  GD NI P   D       +          F 
Sbjct: 121 KFPAKEKFYQDLQSYLEQNLSPQSQVLIMGDMNISPTDLDIGIGDNNQKRWLKTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R    +L++ G  D  R  +   +  +S++DY +  +  N+G+RID +  S      
Sbjct: 181 PEERDWMDRLKDWGLVDTFRHLNPECNDQFSWFDYRSKGFDDNRGLRIDLLFASKPLAER 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             +  ID K R   KPSDH PV    +I
Sbjct: 241 CIATGIDYKIREMEKPSDHAPVWAEFEI 268


>gi|291615383|ref|YP_003525540.1| exodeoxyribonuclease III Xth [Sideroxydans lithotrophicus ES-1]
 gi|291585495|gb|ADE13153.1| exodeoxyribonuclease III Xth [Sideroxydans lithotrophicus ES-1]
          Length = 252

 Score =  209 bits (531), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 92/257 (35%), Positives = 141/257 (54%), Gaps = 7/257 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS++ R+ +L  W+  N  D++CLQETK+EDKNFP   LQ   Y +   GQK
Sbjct: 1   MKLATWNVNSLKVRLPHLLEWLAANPVDVVCLQETKSEDKNFPLAELQQAGYQVAFSGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAILS+    ++   +PG + + +              +R+  +Y+P+G  + S K
Sbjct: 61  TYNGVAILSRQPIGDVQCGIPGFEDEQKRVIAATIDG-----VRVVCVYVPNGQEVGSDK 115

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W+     +  + L     L   GDYNI P+  D ++P+ W+ +   +   R +F
Sbjct: 116 YQYKLKWLAAITAWLKEELAKHPRLALLGDYNIAPEDRDVHDPVAWQGNVLVSAPERDAF 175

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + L  +G  DA R        YS+WDY   ++ +N G+RIDHI++SP       +  ID 
Sbjct: 176 KALLQLGLRDAFRLFEQAEKSYSWWDYRMMAFRRNMGLRIDHILISPAL--QCSACHIDK 233

Query: 244 KPRGWTKPSDHTPVIVS 260
            PR   +PSDHTPV+  
Sbjct: 234 APRKLERPSDHTPVVAE 250


>gi|110638457|ref|YP_678666.1| exodeoxyribonuclease III (exonuclease III) [Cytophaga hutchinsonii
           ATCC 33406]
 gi|110281138|gb|ABG59324.1| exodeoxyribonuclease III (exonuclease III) [Cytophaga hutchinsonii
           ATCC 33406]
          Length = 255

 Score =  209 bits (531), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 102/258 (39%), Positives = 144/258 (55%), Gaps = 3/258 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+NVN +  R+  L  W++E  PD++CLQE K   + FP E      YH    GQK
Sbjct: 1   MKIATYNVNGVNGRLPVLLRWLQEARPDVVCLQELKAPQEKFPEEAFLQAGYHAIWHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           S+NGVAILS+   I  +  +   D +                + IG LYLP+GNP    K
Sbjct: 61  SWNGVAILSRSSDIRELRRVLPGDPEDNHS---RYIEAFVNGIVIGCLYLPNGNPAPGPK 117

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +D K+ W KR    A+  +E + P+   GD+N++P   D Y P  W +DA F  EVR +F
Sbjct: 118 FDYKLKWFKRLTAHAADLIEADMPIALIGDFNVMPTDLDVYKPESWIDDALFRPEVRAAF 177

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           +KL   G+TDAIR  H    +Y+FWDY+ +++ +N G+RIDH +LSP   + L  A +D 
Sbjct: 178 KKLMKQGWTDAIRKLHPDEKIYTFWDYFRNAYGRNAGLRIDHFLLSPPLAAKLKKAGVDK 237

Query: 244 KPRGWTKPSDHTPVIVSL 261
             RGW K SDH P  + L
Sbjct: 238 HVRGWEKSSDHAPTWIIL 255


>gi|302522772|ref|ZP_07275114.1| exodeoxyribonuclease III [Streptomyces sp. SPB78]
 gi|318058357|ref|ZP_07977080.1| exodeoxyribonuclease III [Streptomyces sp. SA3_actG]
 gi|302431667|gb|EFL03483.1| exodeoxyribonuclease III [Streptomyces sp. SPB78]
          Length = 262

 Score =  209 bits (531), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 79/263 (30%), Positives = 128/263 (48%), Gaps = 1/263 (0%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           M  + +ATWNVNSI AR+  L AW++ +  D++C+QETKT  + FP E L+   Y     
Sbjct: 1   MVGMRIATWNVNSITARLPRLLAWLESSGTDVLCVQETKTTAEGFPTEALREAGYESAVN 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
               +NGVA++S+    ++V+ LP            A        +R+ ++Y+P+G  + 
Sbjct: 61  ATGRWNGVAVISRAGLDDVVSGLPDQPAYDGVMEPRALGATCGP-VRVWSVYVPNGREVG 119

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
              Y  K+ W++      +       P    GDYN+ P   D Y+P ++E     T   R
Sbjct: 120 HPHYAYKLEWLEALRAAVAGDAAGTRPFAVMGDYNVAPGDEDVYDPAVFEGLTHVTPPER 179

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            +  +L+  G  D +         Y++WDY   ++ KN+G+RID +  +    S    A 
Sbjct: 180 AALAELRATGLGDLVPRPLKYDRPYTYWDYRQLAFPKNRGMRIDLVYANAAFRSAAKDAY 239

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263
           +D + R     SDH PV+V LD+
Sbjct: 240 VDREERKGKGASDHAPVVVDLDV 262


>gi|13471939|ref|NP_103506.1| exonuclease [Mesorhizobium loti MAFF303099]
 gi|14022683|dbj|BAB49292.1| probable exonuclease [Mesorhizobium loti MAFF303099]
          Length = 256

 Score =  209 bits (531), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 91/259 (35%), Positives = 133/259 (51%), Gaps = 3/259 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+N+N+I +R+ NL AW+    PD++CLQE K  D  FP   L    Y     G+ 
Sbjct: 1   MKLATFNINNINSRLENLLAWLAAAKPDVVCLQELKARDMQFPRTALADAGYGAVWKGEP 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           ++NGVAIL++     +            A             + I  LY P+GNP    K
Sbjct: 61  TWNGVAILARGAEPVLTRDAL---PGDDADRQSRYIEAAVDGIVIACLYAPNGNPQPGPK 117

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K++W  R    A+Q L+   P++ AGDYNI+P+P D Y    ++++A    E R +F
Sbjct: 118 FQYKLAWHARLEAHAAQLLDTGLPVVLAGDYNIVPEPRDIYATRSYDDNALVQPESRAAF 177

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             L   G+ DA+R  +    LY+FWDY  + W ++ G+R+DHI+LS      L  A ID 
Sbjct: 178 AALIEQGWVDALRKIYPKETLYTFWDYRRNRWPRDAGLRLDHILLSKTLARRLKGAGIDR 237

Query: 244 KPRGWTKPSDHTPVIVSLD 262
             RG    SDH PV V L 
Sbjct: 238 DVRGEDGASDHAPVWVELK 256


>gi|261381264|ref|ZP_05985837.1| exodeoxyribonuclease III [Neisseria subflava NJ9703]
 gi|284795738|gb|EFC51085.1| exodeoxyribonuclease III [Neisseria subflava NJ9703]
          Length = 256

 Score =  209 bits (531), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 92/259 (35%), Positives = 137/259 (52%), Gaps = 4/259 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+  R+  +  W+ ++  DI+ LQE K +   FP   LQ + +H    GQK
Sbjct: 1   MKIATWNVNSLNVRLPQVQNWLADHQADILALQELKLDQDKFPAAALQMMGWHCVWSGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAI+S+Y+P ++   LP    D Q R I AT       +R+ N+Y  +G  + S K
Sbjct: 61  TYNGVAIISRYEPQDVHCGLPALPDDPQRRVIAATING----VRVINVYCVNGEALDSPK 116

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K  W      F    +     L+  GD+NI P   DCY+P  W      +   RQ F
Sbjct: 117 FQYKEQWFAALTEFVRTEMAAHPKLVLLGDFNIAPADADCYDPEKWHEKIHCSSIERQWF 176

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + L ++G TD++R  H     Y+++DY    + +  G+RIDHI+ SPE  + L    +D 
Sbjct: 177 KNLLDLGLTDSLRKIHPEDAFYTWFDYRGGMFQRKLGLRIDHILTSPELAATLTDVTVDL 236

Query: 244 KPRGWTKPSDHTPVIVSLD 262
           + R   +PSDH PVI   D
Sbjct: 237 ETRAQERPSDHAPVIAEFD 255


>gi|156934327|ref|YP_001438243.1| exonuclease III [Cronobacter sakazakii ATCC BAA-894]
 gi|156532581|gb|ABU77407.1| hypothetical protein ESA_02158 [Cronobacter sakazakii ATCC BAA-894]
          Length = 268

 Score =  209 bits (531), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 81/268 (30%), Positives = 127/268 (47%), Gaps = 8/268 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H LAA ++++ PD+I LQETK  D  FP E +  L Y++   GQK
Sbjct: 1   MKFISFNINGLRARPHQLAALVEQHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122
            + GVA+L+K  P+ +    PGD  + Q R I A    +   + + N Y P G       
Sbjct: 61  GHYGVALLTKATPVSVRRGFPGDGEEAQRRIIMAEIPSSIGDITVINGYFPQGESRDHEV 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  + +    +    L  ++P++  GD NI P         +     +      F 
Sbjct: 121 KFPAKAKFYQDLQDYLETALSNDKPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+   +L N G  D  R  +      YS++DY +  +  N+G+RID ++ S    + 
Sbjct: 181 PEEREWMGRLLNWGLKDTFRHANPETSDRYSWFDYRSKGFDDNRGLRIDLLLASDPLMAR 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           L    ID   R   KPSDH PV  +  +
Sbjct: 241 LAETGIDYDIRAMEKPSDHAPVWATFSL 268


>gi|238020687|ref|ZP_04601113.1| hypothetical protein GCWU000324_00577 [Kingella oralis ATCC 51147]
 gi|237867667|gb|EEP68673.1| hypothetical protein GCWU000324_00577 [Kingella oralis ATCC 51147]
          Length = 255

 Score =  209 bits (531), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 92/259 (35%), Positives = 138/259 (53%), Gaps = 4/259 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+  R+  ++ W+  + PDI+ LQE K E   +P    + + +H    GQK
Sbjct: 1   MKIATWNVNSLNVRLPQVSDWLAAHQPDILVLQELKLEQDKYPAAAFRMMGWHTAWAGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAI+S++   ++ T LP    D Q R I AT       +R+ N+Y  +G  + S K
Sbjct: 61  TYNGVAIISRHPLQDVQTGLPALPDDPQQRVIAATI----NDIRVINVYCVNGEALDSPK 116

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K  W      +   +L     L+  GD+NI P   D Y+P  W      + E RQ F
Sbjct: 117 FAYKRQWFAALTEYVRDQLAQHPKLVLLGDFNIAPADDDVYDPQRWHEKILCSGEERQWF 176

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             L N+G  DA+R  + T   Y++WDY    ++K  G+RIDH+++SP     L S  ID+
Sbjct: 177 ANLLNLGLHDALRHIYPTGAHYTWWDYRGAMFAKGLGLRIDHLLISPALRDSLRSVNIDS 236

Query: 244 KPRGWTKPSDHTPVIVSLD 262
           + R   +PSDH PV+   D
Sbjct: 237 EARAQERPSDHAPVVAEWD 255


>gi|218245849|ref|YP_002371220.1| exodeoxyribonuclease III [Cyanothece sp. PCC 8801]
 gi|257058897|ref|YP_003136785.1| exodeoxyribonuclease III [Cyanothece sp. PCC 8802]
 gi|218166327|gb|ACK65064.1| exodeoxyribonuclease III [Cyanothece sp. PCC 8801]
 gi|256589063|gb|ACU99949.1| exodeoxyribonuclease III [Cyanothece sp. PCC 8802]
          Length = 262

 Score =  209 bits (531), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 96/262 (36%), Positives = 145/262 (55%), Gaps = 4/262 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + VATWNVNSIR R  ++  W+K NN D++C+QETK  D++FP    + L YH+   GQK
Sbjct: 1   MKVATWNVNSIRTRQPHVIDWLKTNNIDVLCVQETKVIDQDFPKTPFEELGYHLYIYGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL---RIGNLYLPHGNPIT 120
           +YNGVAI S+    ++         +  A   +    + T      RI NLY+P+G+ + 
Sbjct: 61  AYNGVAIFSRQPLEDVTMGFTPIVGESLAEDFDEQKRVITGIFQGVRIVNLYVPNGSAVG 120

Query: 121 STKYDDKISWIKRFLRFASQRLEL-EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
           + KYD K+ W+K   ++ +Q LE  ++ L   GD+NI  +  D YN    E+    +   
Sbjct: 121 TEKYDYKLRWLKVLKQYLTQFLEKSKQELCICGDFNIALEDKDIYNSKSKEDHIMSSPLE 180

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R+S + + ++G  DA R        +S+WDY +  + +N+G RIDH  L+P+      S 
Sbjct: 181 RESLKDILDLGLKDAFRKFTSEGGQFSWWDYRSGGFQRNRGWRIDHHYLTPKLYEKAISC 240

Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261
            ID +PR  T+PSDH PVIV  
Sbjct: 241 TIDIEPRKLTQPSDHAPVIVEF 262


>gi|74318453|ref|YP_316193.1| exodeoxyribonuclease III [Thiobacillus denitrificans ATCC 25259]
 gi|74057948|gb|AAZ98388.1| exodeoxyribonuclease III xth [Thiobacillus denitrificans ATCC
           25259]
          Length = 255

 Score =  209 bits (531), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 84/258 (32%), Positives = 128/258 (49%), Gaps = 5/258 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A WNVNS++ R+  L  ++    PD++CLQETK  D  FP   L +  Y     GQK
Sbjct: 1   MKIAAWNVNSLKVRLPQLLDFLATRRPDVVCLQETKVPDDAFPSVELSAAGYRAVFSGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAILS+ Q  ++   +PG   + +               R+  +Y P+G    S K
Sbjct: 61  TYNGVAILSRSQATDVSVGIPGFGDEQKRVIAATVEGT-----RVVCVYCPNGQSPDSDK 115

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K++W      +  + L     L   GD+NI P+  D ++P  WE     +   R+ F
Sbjct: 116 YFYKLAWFDALSLWLMEELARHPRLAVLGDFNIAPEDRDVHDPKAWEGSVHVSPRERERF 175

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q L  +G  D+ R        +S+WDY    + +N G+RIDHI+L+    +   S+ ID 
Sbjct: 176 QALLQLGLKDSFRLFEQPEKSFSWWDYRMMGFRRNHGLRIDHILLTDALAASCTSSTIDR 235

Query: 244 KPRGWTKPSDHTPVIVSL 261
             R   +PSDH PV+  +
Sbjct: 236 DMRKLERPSDHAPVLAEI 253


>gi|21958993|gb|AAM85715.1|AE013819_1 exonuclease III [Yersinia pestis KIM 10]
 gi|45436631|gb|AAS62185.1| exodeoxyribonuclease III [Yersinia pestis biovar Microtus str.
           91001]
          Length = 271

 Score =  209 bits (531), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 88/271 (32%), Positives = 132/271 (48%), Gaps = 8/271 (2%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           M  +   ++N+N +RAR H LAA I+++ PD+I LQETK  D  FP E +    YH+   
Sbjct: 1   MLTMKFVSFNINGLRARPHQLAAIIEQHQPDVIGLQETKVHDDMFPLEDVSQHGYHVFYH 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           GQK + GVA+L+K QP+ +    P D+ D Q R I A       TL + N Y P G    
Sbjct: 61  GQKGHYGVALLTKEQPLAVRRGFPSDEEDAQRRIIMADLATPQGTLTVINGYFPQGESRD 120

Query: 121 STK-YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDA 173
               +  K  +     R+  ++L  E  ++  GD NI P         D     +     
Sbjct: 121 HPIKFPAKARFYADLQRYLEEQLSPEAQVLIMGDLNISPTDLDIGIGEDNRKRWLRTGKC 180

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
            F  E R+  ++LQN G  D  RA +   +  +S++DY +  + +N+G+RID ++ S   
Sbjct: 181 SFLPEEREWLERLQNWGLVDTFRAANPDCNDHFSWFDYRSRGFDENRGLRIDLLLASQPL 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            +   +  ID   RG  KPSDH PV     +
Sbjct: 241 AARCIATGIDYAIRGMEKPSDHAPVWSEFSL 271


>gi|227355788|ref|ZP_03840181.1| exodeoxyribonuclease III [Proteus mirabilis ATCC 29906]
 gi|227164107|gb|EEI49004.1| exodeoxyribonuclease III [Proteus mirabilis ATCC 29906]
          Length = 268

 Score =  208 bits (530), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 85/268 (31%), Positives = 127/268 (47%), Gaps = 8/268 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A ++++ PD+I LQETK  D  FP ET+ +L YH+   GQK
Sbjct: 1   MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLETVSALGYHVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122
            + GVA+L+K +P+ +    PGD  + Q R I A        L + N Y P G      T
Sbjct: 61  GHYGVALLTKAKPVAVRKGFPGDGEEAQRRMIMADIETPAGLLTVMNGYFPQGESRDHET 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACFT 176
           K+  K  +     ++ +  L    P++  GD NI P         +     +      F 
Sbjct: 121 KFPAKAKFYADLQQYLTTSLTPSSPVLIMGDLNISPTDKDIGIGENNMKRWLKMGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+    L   G TD  RA H    + +S++DY +  +  N+G+RID ++ S      
Sbjct: 181 PEEREWLATLMGWGLTDTYRAQHPEVENQFSWFDYRSKGFDDNRGLRIDLLLASRCLADN 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             S  ID   R   KPSDH PV     +
Sbjct: 241 CISTGIDYDIRAMEKPSDHAPVWAEFKL 268


>gi|260597606|ref|YP_003210177.1| exonuclease III [Cronobacter turicensis z3032]
 gi|260216783|emb|CBA30234.1| Exodeoxyribonuclease III [Cronobacter turicensis z3032]
          Length = 268

 Score =  208 bits (530), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 82/268 (30%), Positives = 127/268 (47%), Gaps = 8/268 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H LAA ++++ PD+I LQETK  D  FP E +  L Y++   GQK
Sbjct: 1   MKFISFNINGLRARPHQLAALVEQHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122
            + GVA+L+K  P+ +    PGDD + Q R I A        + + N Y P G       
Sbjct: 61  GHYGVALLTKATPVSVRRGFPGDDEEAQRRIIMAEIPSAIGDITVINGYFPQGESRDHAV 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  + +    +    L  ++P++  GD NI P         +     +      F 
Sbjct: 121 KFPAKAKFYQDLQDYLETALSNDKPVLIMGDMNISPGDLDIGIGEESRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+   +L N G  D  R  +      YS++DY +  +  N+G+RID ++ S    + 
Sbjct: 181 PEEREWMGRLLNWGLKDTFRHANPDITDRYSWFDYRSKGFDDNRGLRIDLLLASDPLMAR 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           L    ID   R   KPSDH PV  +  +
Sbjct: 241 LVETGIDYDIRAMEKPSDHAPVWATFSL 268


>gi|221066056|ref|ZP_03542161.1| exodeoxyribonuclease III Xth [Comamonas testosteroni KF-1]
 gi|220711079|gb|EED66447.1| exodeoxyribonuclease III Xth [Comamonas testosteroni KF-1]
          Length = 258

 Score =  208 bits (530), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 92/259 (35%), Positives = 143/259 (55%), Gaps = 1/259 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+  R+  +  W+  N  D + LQE K  D  FP    Q   Y   + GQK
Sbjct: 1   MKIATWNVNSLSVRLPQVLEWLAANPVDALGLQELKLTDDKFPHMAFQEAGYTAVSHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVA +++    ++V ++PG D D QAR I  T       +R+ N Y  +G    S K
Sbjct: 61  TYNGVAWITRETGRDVVRNIPGLD-DEQARIIATTIDSPAGEVRLINGYFVNGQEPGSEK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W++    +  +++ L   L+  GD+N+ P+  D Y+P+  ++    T++ R  F
Sbjct: 120 FAYKMRWLQALQDWVKEQMALHPRLVLVGDFNVAPEDRDSYDPVGLKDTIHHTVQERDHF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q+L  +G +DA R        YS+WDY    + KN+G+RIDHI++S    S + +  +D 
Sbjct: 180 QRLLQLGLSDAFRMFEQPEKSYSWWDYRMLGFQKNRGLRIDHILVSEALRSKVSACSVDR 239

Query: 244 KPRGWTKPSDHTPVIVSLD 262
            PR   +PSDH PVIV+LD
Sbjct: 240 APRKNKQPSDHAPVIVTLD 258


>gi|26989426|ref|NP_744851.1| exodeoxyribonuclease III, putative [Pseudomonas putida KT2440]
 gi|24984291|gb|AAN68315.1|AE016465_8 exodeoxyribonuclease III, putative [Pseudomonas putida KT2440]
          Length = 265

 Score =  208 bits (530), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 103/262 (39%), Positives = 152/262 (58%), Gaps = 5/262 (1%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           M  + +AT+N+N IR+R+  L AW++   PDI CLQE K  D+ FP   L++  Y     
Sbjct: 1   MKALKIATFNINGIRSRLPALLAWLEREQPDIACLQELKAADQQFPRAELEAAGYGSLHH 60

Query: 61  GQKSYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
           GQ S+NGVAIL +   P+E+   LPG + D Q+R++EA        + +  LYLP+GNP+
Sbjct: 61  GQPSWNGVAILVRGSDPLEVRRGLPGLEEDSQSRYLEAA----AHGVLVACLYLPNGNPL 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K+D K+ W +  ++ A    E   P + AGD+N++P   D YNP  W  DA    E 
Sbjct: 117 PGPKFDYKLHWFECLIQHARSLQESGHPTLLAGDFNVVPTDMDIYNPRSWLKDALLQPES 176

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R  +Q+L + G+ DAIR  +    +Y+FWDY+ + W++N G+RIDH++L+ E    L  A
Sbjct: 177 RACYQRLLDQGWLDAIRHLYPDERVYTFWDYFRNHWARNAGLRIDHLLLNRELAPYLKRA 236

Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261
            +D   R   K SDH PV + L
Sbjct: 237 GVDAWVRNQAKASDHAPVWIEL 258


>gi|253688361|ref|YP_003017551.1| exodeoxyribonuclease III [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251754939|gb|ACT13015.1| exodeoxyribonuclease III [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 272

 Score =  208 bits (530), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 90/268 (33%), Positives = 127/268 (47%), Gaps = 8/268 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V ++N+N +RAR H LAA I+++ PD+I LQETK  D  FP E +    YH+   GQK
Sbjct: 5   MKVVSFNINGLRARPHQLAAIIEQHQPDVIGLQETKVHDDMFPLEDVSQYGYHVYYHGQK 64

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122
            + GVA+L K QPI +    P D+ D Q R I A F     T  I N Y P G       
Sbjct: 65  GHYGVALLCKAQPIAVRRGFPTDEDDAQRRIIMADFATEHGTFTIVNGYFPQGESRDHPV 124

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  + +    +  Q     +PLI  GD NI P         +     +      F 
Sbjct: 125 KFPAKTRFYQDLQTYLEQHHSATQPLIVMGDVNISPTDLDIGIGEENRKRWLRTGKCSFL 184

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+   +LQ  G  D  RA +   +  +S++DY +  +  N+G+RID I+ S      
Sbjct: 185 PEEREWMARLQGWGLIDTFRAANPESNDRFSWFDYRSAGFDDNRGLRIDLILASNFLADR 244

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             +  ID   RG  KPSDH P+     +
Sbjct: 245 CVATGIDYDIRGMEKPSDHAPIWAQFAL 272


>gi|298493134|ref|YP_003723311.1| exodeoxyribonuclease III ['Nostoc azollae' 0708]
 gi|298235052|gb|ADI66188.1| exodeoxyribonuclease III ['Nostoc azollae' 0708]
          Length = 260

 Score =  208 bits (530), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 86/260 (33%), Positives = 144/260 (55%), Gaps = 2/260 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSIR R+  +  W+ E+  D++CLQETK  DK+FP  + +++ YH    GQK
Sbjct: 1   MKIATWNVNSIRTRLEQVINWLSESPVDVLCLQETKVVDKDFPLISFENVGYHPYIYGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT--LRIGNLYLPHGNPITS 121
           +YNGVA++S+     +         +++ ++ E    I      +RI N Y+P+G+ + S
Sbjct: 61  AYNGVALISRQPLENVSMGFCAILPELEPQWDEQKRVITGVIDGVRIVNTYVPNGSAVGS 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            KY+ K+ W+    ++    L  +  +   GD+NI  +  D ++ +  E+    +   RQ
Sbjct: 121 EKYEYKLGWLTVLRKYLQVLLLSDPAISMCGDFNIALEDIDIHDKVKIEDHIMASERERQ 180

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           + + + ++GF DA R  ++    YS+WDY   ++ +N G RIDH  ++P   +   S  I
Sbjct: 181 ALRDILSLGFADAFRKFNNEGGNYSWWDYRTAAFRRNLGWRIDHHYVTPVLCARAQSCII 240

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
           D  PR   +PSDHTPV+V  
Sbjct: 241 DVAPRKLEQPSDHTPVVVEF 260


>gi|318081282|ref|ZP_07988614.1| exodeoxyribonuclease III [Streptomyces sp. SA3_actF]
          Length = 259

 Score =  208 bits (530), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 78/260 (30%), Positives = 127/260 (48%), Gaps = 1/260 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSI AR+  L AW++ +  D++C+QETKT  + FP E L+   Y        
Sbjct: 1   MRIATWNVNSITARLPRLLAWLESSGTDVLCVQETKTTAEGFPTEALREAGYESAVNATG 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVA++S+    ++V+ LP            A        +R+ ++Y+P+G  +    
Sbjct: 61  RWNGVAVISRAGLDDVVSGLPDQPAYDGVMEPRALGATCGP-VRVWSVYVPNGREVGHPH 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W++      +       P    GDYN+ P   D Y+P ++E     T   R + 
Sbjct: 120 YAYKLEWLEALRAAVAGDAAGTRPFAVMGDYNVAPGDEDVYDPAVFEGLTHVTPPERAAL 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            +L+  G  D +         Y++WDY   ++ KN+G+RID +  +    S    A +D 
Sbjct: 180 AELRATGLGDLVPRPLKYDRPYTYWDYRQLAFPKNRGMRIDLVYANAAFRSAAKDAYVDR 239

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
           + R     SDH PV+V LD+
Sbjct: 240 EERKGKGASDHAPVVVDLDV 259


>gi|312141216|ref|YP_004008552.1| exodeoxyribonuclease iii [Rhodococcus equi 103S]
 gi|311890555|emb|CBH49873.1| exodeoxyribonuclease III [Rhodococcus equi 103S]
          Length = 266

 Score =  208 bits (530), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 77/265 (29%), Positives = 126/265 (47%), Gaps = 7/265 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+RAR   +  W+   + D++ +QETK +D+ FP+E      Y +   G  
Sbjct: 1   MRIATWNVNSVRARTDRIVDWLARTDTDVLAMQETKCKDEQFPYERFTEAGYEVAHVGLS 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ-----TLRIGNLYLPHGNP 118
            +NGVAI S+    ++           +    EAT            +R+ +LY+P+G  
Sbjct: 61  QWNGVAIASRIGLEDVQVGFADQPGFNKDPEAEATREARAIGATVGGVRVWSLYVPNGRE 120

Query: 119 ITSTKYDDKISWIKRFLRFASQRL--ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
           +T   Y  K+ W+ +    A   L    +  +   GD+N+ P   D ++P  +E     +
Sbjct: 121 LTDPHYVYKLEWLAKLRADAEGWLAGNPDAQIALVGDWNVAPTDEDVWDPAFFEGKTHTS 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
              R +F      GF D +R       +Y++WDY    + K +G+RID+++ SP   + +
Sbjct: 181 QPERDAFDAFAEAGFADVVRPHTPGPGVYTYWDYTQLRFPKRQGMRIDYVLGSPAFAARV 240

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSL 261
             A ID   R     SDH PV+V L
Sbjct: 241 TGAHIDRDERKGKGASDHAPVVVDL 265


>gi|193222381|emb|CAL62516.2| Putative exodeoxyribonuclease III [Herminiimonas arsenicoxydans]
          Length = 254

 Score =  208 bits (530), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 99/259 (38%), Positives = 146/259 (56%), Gaps = 5/259 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS++ R+  +  W+ +N  D++CLQETKT D+ FP   +++  Y +   GQK
Sbjct: 1   MKLATWNVNSLKVRLPQVQQWLVDNPVDVLCLQETKTVDEKFPVAEIEAAGYQVAFTGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAILS++   ++  + P  D + Q            Q +RI   Y+P+G    S K
Sbjct: 61  TYNGVAILSRHPITDVTKNNPLLDDEQQRII-----AGTIQGIRIVCAYVPNGQSPDSDK 115

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K++W+K    + +Q  +    L   GDYNI P+  D ++P  W      +   R +F
Sbjct: 116 YIYKLNWLKALHEWLAQEQQQHPELALLGDYNIAPEDRDVHDPAAWAGQVLVSEPERAAF 175

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            +LQ MGFTDA R       LYS+WDY    +  N+G+RIDHI+LS    +   +  ID 
Sbjct: 176 VRLQEMGFTDAFRMFEQPEKLYSWWDYRQMGFRLNRGLRIDHILLSAPLAARCSACVIDK 235

Query: 244 KPRGWTKPSDHTPVIVSLD 262
            PR W +PSDHTPVI ++D
Sbjct: 236 VPRKWEQPSDHTPVIATID 254


>gi|261343612|ref|ZP_05971257.1| exodeoxyribonuclease III [Providencia rustigianii DSM 4541]
 gi|282567993|gb|EFB73528.1| exodeoxyribonuclease III [Providencia rustigianii DSM 4541]
          Length = 271

 Score =  208 bits (530), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 88/268 (32%), Positives = 130/268 (48%), Gaps = 8/268 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H LAA I+++ P++I LQETK  D  FP++ +  L YH+   GQK
Sbjct: 1   MKFISFNINGLRARPHQLAAIIEKHQPEVIGLQETKVHDDMFPYDEVSKLGYHVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122
           ++ GVA+L K +PI +    P DD D Q R I A    N   L + N Y P G       
Sbjct: 61  AHYGVALLLKNEPIAVRKGFPNDDEDAQRRIIMADIQTNQGLLTVVNGYFPQGESRDHPT 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACFT 176
           K+  K  + +    + +     E  L+  GD NI P   D           +      F 
Sbjct: 121 KFPAKQKFYQDLQDYVTSTQTPESQLLIMGDMNISPTDLDIGIGEVNRKRWLKTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+   +L + G  D  R  H      YS++DY +  +  N+G+RID ++ S +  S 
Sbjct: 181 PEEREWLARLLDWGLVDTYREQHPDTTDSYSWFDYRSKGFDDNRGLRIDLLLASKKLASR 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             +  ID + RG  KPSDH PV    D+
Sbjct: 241 CTATGIDLEIRGMEKPSDHAPVWAEFDL 268


>gi|77459871|ref|YP_349378.1| exonuclease III [Pseudomonas fluorescens Pf0-1]
 gi|77383874|gb|ABA75387.1| exodeoxyribonuclease III [Pseudomonas fluorescens Pf0-1]
          Length = 270

 Score =  208 bits (530), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 89/269 (33%), Positives = 135/269 (50%), Gaps = 11/269 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +RAR H LAA I+++ PD+I LQETK  D  FP E +++L YH+   GQK
Sbjct: 1   MKIVSFNINGLRARPHQLAALIEKHQPDVIGLQETKVHDDQFPLEEVRALGYHVYFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122
            + GVA+LS+ +PI +      D+ D Q RFI  TF   N   + I N Y P G      
Sbjct: 61  GHYGVALLSRQEPIAVHKGFATDEEDAQRRFIWGTFADANGVPVTIMNGYFPQGESRDHP 120

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE------NDACF 175
            K+  K  +          +   E+PL+  GD NI P+  D                  F
Sbjct: 121 TKFPAKQRFYSDLQALLESQFHNEQPLVVMGDVNISPEDCDIGIGPDNMKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232
             E R+   +L+N G TD+ R  +      +S++DY +  +     +G+RID I+ S   
Sbjct: 181 LPEEREWMARLKNWGLTDSFRHLNPDVTDTFSWFDYRSRGFEDEPKRGLRIDVILASHGL 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
              + +A +D + RG  KPSDH P+ + L
Sbjct: 241 LPRVKAAGVDYELRGMEKPSDHAPIWLEL 269


>gi|239945332|ref|ZP_04697269.1| putative exonuclease [Streptomyces roseosporus NRRL 15998]
 gi|239991789|ref|ZP_04712453.1| putative exonuclease [Streptomyces roseosporus NRRL 11379]
 gi|291448794|ref|ZP_06588184.1| exonuclease [Streptomyces roseosporus NRRL 15998]
 gi|291351741|gb|EFE78645.1| exonuclease [Streptomyces roseosporus NRRL 15998]
          Length = 259

 Score =  208 bits (530), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 78/260 (30%), Positives = 128/260 (49%), Gaps = 1/260 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+NVNSI AR+  L AW++ +  D++C+QETK   + FP E L+   Y        
Sbjct: 1   MRIATYNVNSITARLPRLLAWLESSGTDVLCIQETKCTAEQFPAEALREAGYESAVNATG 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVA+LS+    ++VT LPG       +   A        LR+ ++Y+P+G  +    
Sbjct: 61  RWNGVALLSRVGLTDVVTGLPGGPEYDGVQEPRAISATCGP-LRLWSVYVPNGREVEHEH 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W++   +  +       P    GD+N+ P   D ++P ++E     T   R + 
Sbjct: 120 YAYKLRWLEALRKAVAADAAGSLPFAVLGDFNVAPTDEDVWDPALFEGATHVTPAERAAL 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             L+  G ++           Y+FWDY    + KNKG+RID    +   T+ +  + +D 
Sbjct: 180 AALEAEGLSEVHPRPLKYDRAYTFWDYRELRFPKNKGMRIDLTFGNAPFTAAVKDSYVDR 239

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
           + R     SDH PV+V LD+
Sbjct: 240 EERKGKGASDHAPVVVDLDL 259


>gi|33861041|ref|NP_892602.1| exodeoxyribonuclease III [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
 gi|33639773|emb|CAE18943.1| exodeoxyribonuclease III [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
          Length = 281

 Score =  208 bits (530), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 94/275 (34%), Positives = 142/275 (51%), Gaps = 4/275 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+R R+  +  WIKE NPDI+CLQETK  D  FP    + L Y +   GQK
Sbjct: 1   MLIATWNVNSVRTRLSQIINWIKEVNPDILCLQETKVIDDAFPSSHFEELGYEVIIHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT----INTQTLRIGNLYLPHGNPI 119
           SYNGVAI+SK++   +      ++                      L+I N+Y+P+G+ I
Sbjct: 61  SYNGVAIISKFKIENVKKGFTNENKTGGISIDINEQKRLISAEINGLKIINVYVPNGSSI 120

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
            S KYD KI W+     F   +++ ++ +   GD+NI P   D + P  +E     +   
Sbjct: 121 DSEKYDYKIQWLNYLSAFLDDQVKNDDLVCLVGDFNIAPSEIDIHTPQKYEGGIMASKIE 180

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R++   +    F D+ R        +S+WDY  +++  NKG RIDHI +S   +S L S 
Sbjct: 181 REALNNVLKGRFIDSFRIFEKNTGHWSWWDYRNNAYELNKGWRIDHIYISKNLSSKLKSC 240

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDST 274
            I+   R   +PSDH PV+++L+I    +   D  
Sbjct: 241 VIERNQRENLQPSDHAPVLINLEIDSHYEDYLDVD 275


>gi|146282538|ref|YP_001172691.1| exonuclease III [Pseudomonas stutzeri A1501]
 gi|145570743|gb|ABP79849.1| exodeoxyribonuclease III [Pseudomonas stutzeri A1501]
          Length = 301

 Score =  208 bits (530), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 83/271 (30%), Positives = 134/271 (49%), Gaps = 11/271 (4%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           +++ + ++N+N +RAR H L+A I+++ PD+I LQETK  D+ FP   +++L YH+   G
Sbjct: 30  TLMKIVSFNINGLRARPHQLSAIIEKHQPDVIGLQETKVADEQFPQAEIEALGYHVHYHG 89

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPIT 120
           QK + GVA+LS+  P+E+    P D  + Q RFI   F   N Q + + N Y P G    
Sbjct: 90  QKGHYGVALLSRQAPLEVHKGFPSDGEESQKRFIWGRFADANGQPVTVMNGYFPQGESRA 149

Query: 121 ST-KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDA 173
              K+  K  +         QR   +E L   GD+NI PQ  D           +     
Sbjct: 150 HPVKFPAKTKFYADLQALLEQRFSPDESLALMGDFNISPQDCDIGIGEVNAKRWLRTGKC 209

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKN--KGIRIDHIMLSP 230
            F  E R+  ++++  G  D+ R  +      +S++DY +  +     +G+RID+I+ + 
Sbjct: 210 SFLPEEREWLERIKGWGLQDSFRTLNPEVVDRFSWFDYRSRGFEDEPRRGLRIDYILTTH 269

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
                +    +D   R   KPSDH PV + L
Sbjct: 270 ALHERVTDCGVDYDIRAMEKPSDHCPVWIEL 300


>gi|310767787|gb|ADP12737.1| hypothetical protein EJP617_30560 [Erwinia sp. Ejp617]
          Length = 303

 Score =  208 bits (530), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 82/268 (30%), Positives = 123/268 (45%), Gaps = 8/268 (2%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
            V+   ++N+N +RAR H L A ++++ PD+I LQETK  D  FP E + SL YH+   G
Sbjct: 34  RVMKFVSFNINGLRARPHQLQAIVEQHQPDVIGLQETKVHDDMFPLEEVASLGYHVFCHG 93

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           QK + GVA+L K QP+ +     GD+ D Q R I A        L + N Y P G     
Sbjct: 94  QKGHYGVALLCKQQPVAVRRGFAGDNEDAQRRIIMADILTPAGPLTVINGYFPQGESRDH 153

Query: 122 T-KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDAC 174
             K+  K  + +    +  Q+ + +  L+  GD NI           +     +      
Sbjct: 154 PTKFPAKEKFYRDLQSYLEQQQKADNQLLIMGDMNISSSDLDIGIGEESRKRWLRTGKCS 213

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
           F  E R+    L N G  D  R  +   +  +S++DY +  +  N+G+RID I+ S    
Sbjct: 214 FLPEEREWMSTLMNWGLYDTWRTQNATVNDRFSWFDYRSKGFDDNRGLRIDLILASRPLA 273

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSL 261
               +  ID   R   KPSDH P+    
Sbjct: 274 DRCVATGIDYDIRAMEKPSDHAPIWAEF 301


>gi|239916752|ref|YP_002956310.1| Exodeoxyribonuclease III [Micrococcus luteus NCTC 2665]
 gi|281414790|ref|ZP_06246532.1| Exodeoxyribonuclease III [Micrococcus luteus NCTC 2665]
 gi|239837959|gb|ACS29756.1| Exodeoxyribonuclease III [Micrococcus luteus NCTC 2665]
          Length = 275

 Score =  208 bits (530), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 76/274 (27%), Positives = 131/274 (47%), Gaps = 16/274 (5%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+RAR   + A+++ ++ D++ +QETK  D+NFP+E  +   Y +   G  
Sbjct: 1   MKIATWNVNSLRARADRVEAFLERHDIDVLAIQETKCRDENFPWELFERAGYEVVHNGTS 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT------------INTQTLRIGNL 111
            +NGVAI S+    ++    PG     +        +                 +R+ +L
Sbjct: 61  QWNGVAIASRVGLSDVQRGFPGQPHFGKGGVDPQEESRAIGATVGAEAADGVAPVRLWSL 120

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIW 169
           Y+P+G  +       K+ W++     A+  L  +       AGD+NI PQ  D ++  ++
Sbjct: 121 YVPNGRGLEDEHMGYKLEWLRVLQEHAAAHLAEDPDTRLALAGDWNIAPQDEDVWDIELF 180

Query: 170 E--NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227
           +       +   R +F   ++ G  D +R  H    +Y++WDY   ++ K KG+RID  +
Sbjct: 181 QREGYTHVSPAERAAFHAFEDAGLVDVVRPRHPGPGVYTYWDYTGLAFPKKKGMRIDFQL 240

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
            SP     +  A I+ + R     SDH PV+V L
Sbjct: 241 CSPALARTVTDAWIEREERKGKGASDHAPVVVEL 274


>gi|254382239|ref|ZP_04997600.1| exonuclease [Streptomyces sp. Mg1]
 gi|194341145|gb|EDX22111.1| exonuclease [Streptomyces sp. Mg1]
          Length = 261

 Score =  208 bits (530), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 77/260 (29%), Positives = 129/260 (49%), Gaps = 1/260 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+NVNSI AR+  L AW++ +  D++C+QETK   + FP E L+ L Y        
Sbjct: 1   MRIATFNVNSITARLPRLLAWLESSGTDVVCIQETKCSAEQFPHEQLRELGYEAAVNATG 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVA++SK    ++VT LPG       +   A        +R+ ++Y+P+G  +    
Sbjct: 61  RWNGVALISKVGLEDVVTGLPGGPDYEGVQEPRAISATCGG-VRLWSVYVPNGREVEHDH 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W +      ++      P    GDYN+ P   D ++P ++E     T   R + 
Sbjct: 120 YGYKLEWFRALTAAVAEDAAGPRPFAVLGDYNVAPTDEDVFDPAVFEGLTHVTPAERAAL 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + L+  G +D +         Y++WDY   ++ KN+G+RID +  +      +  A +D 
Sbjct: 180 EALRAAGLSDVVPRPLKYDRPYTYWDYRQLAFPKNRGMRIDLVYGNEAFAKAVTDAYVDR 239

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
           + R     SDH PV+V L +
Sbjct: 240 EERKGKGASDHAPVVVDLSL 259


>gi|212710738|ref|ZP_03318866.1| hypothetical protein PROVALCAL_01806 [Providencia alcalifaciens DSM
           30120]
 gi|212686435|gb|EEB45963.1| hypothetical protein PROVALCAL_01806 [Providencia alcalifaciens DSM
           30120]
          Length = 270

 Score =  208 bits (530), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 86/268 (32%), Positives = 128/268 (47%), Gaps = 8/268 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A I+++ P++I LQETK  D  FP+E +  L YH+   GQK
Sbjct: 1   MKFISFNINGLRARPHQLEAIIEKHQPEVIGLQETKVHDDMFPYEEVSKLGYHVYYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122
           ++ GVA+L K +PI +    P DD + Q R I A    N   L + N Y P G       
Sbjct: 61  AHYGVALLLKNEPIAVRKGFPTDDEEAQRRIIMADIQTNEGILTVVNGYFPQGESRDHPT 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACFT 176
           K+  K  + +    + +     +  L+  GD NI P   D           +      F 
Sbjct: 121 KFPAKEKFYRDLQDYVTSTQTADSQLLIMGDMNISPTDLDIGIGDVNRKRWLKTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+  ++L   G  D  R  H      YS++DY +  +  N+G+RID ++ S +  S 
Sbjct: 181 PEEREWLERLLGWGLVDTYREQHPDTTDRYSWFDYRSKGFDDNRGLRIDLLLASKKLASR 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             +  ID   RG  KPSDH PV    D+
Sbjct: 241 CRATGIDYDIRGMEKPSDHAPVWAEFDL 268


>gi|239983300|ref|ZP_04705824.1| exonuclease [Streptomyces albus J1074]
 gi|291455127|ref|ZP_06594517.1| exonuclease [Streptomyces albus J1074]
 gi|291358076|gb|EFE84978.1| exonuclease [Streptomyces albus J1074]
          Length = 259

 Score =  208 bits (529), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 76/258 (29%), Positives = 124/258 (48%), Gaps = 1/258 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSI AR+  L AW++ +  D++C+QETKT ++ FP + L  L Y        
Sbjct: 1   MRIATWNVNSITARLPRLLAWLESSGTDVLCIQETKTTEEAFPADALAELGYESAVRATG 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVAI+S+    ++V  LPG           A        +R+ ++Y+P+G  +    
Sbjct: 61  RWNGVAIVSRAGLDDVVGGLPGGPEYDGVEEPRAISATCGP-VRVWSVYVPNGREVGHPH 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W+K      +       P    GDYNI P   D ++P  +      T E R++ 
Sbjct: 120 FAYKLQWLKALRDAVADDAAGGRPFAVLGDYNIAPHDTDVWDPTAFIGATHVTPEEREAL 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             L+  G  D +         +++WDY    + KN+G+RID +  +    + +  A +D 
Sbjct: 180 AALRATGLDDVVPRPLKYDQPFTYWDYRQLGFPKNRGMRIDLVYGNDPFRAAVSDAYVDR 239

Query: 244 KPRGWTKPSDHTPVIVSL 261
           + R     SDH PV+  L
Sbjct: 240 EERKGKGASDHAPVVTDL 257


>gi|153876175|ref|ZP_02003628.1| Endonuclease/exonuclease/phosphatase [Beggiatoa sp. PS]
 gi|152067361|gb|EDN66372.1| Endonuclease/exonuclease/phosphatase [Beggiatoa sp. PS]
          Length = 253

 Score =  208 bits (529), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 91/259 (35%), Positives = 135/259 (52%), Gaps = 7/259 (2%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           ++ +ATWNVNS+R R+ +L  W+  + PDII LQE K  D+ FP   +++  YH    GQ
Sbjct: 1   MLKIATWNVNSLRVRLPHLLDWLSNHQPDIIALQEIKVMDEQFPLAEIEAAGYHALFAGQ 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K+YNGVA+LS+    +I+T  P  +   +              LRI N+Y+P+G  + S 
Sbjct: 61  KTYNGVALLSRKPGNDIITDFPDFNDPQRRFLGATYDK-----LRILNVYVPNGASVDSD 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           KY  K+ W+ +   +    L+    LI  GD+NI P+  D Y+PI W      +   R +
Sbjct: 116 KYQYKLEWLTQLQNYICDNLKQYPRLIVLGDFNIAPEDQDVYDPIAWAGKILVSPPERTA 175

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
            Q L ++G  D  R        +S+WDY   ++ +N GIRID I+ S           ID
Sbjct: 176 LQNLLHLGLKDTFRLFEQPVASFSWWDYRRGAFLRNHGIRIDLILASTAL--HCTGCTID 233

Query: 243 TKPRGWTKPSDHTPVIVSL 261
           T PR   +PSDH PV+ + 
Sbjct: 234 TAPRRLERPSDHAPVVATF 252


>gi|229822126|ref|YP_002883652.1| exodeoxyribonuclease III Xth [Beutenbergia cavernae DSM 12333]
 gi|229568039|gb|ACQ81890.1| exodeoxyribonuclease III Xth [Beutenbergia cavernae DSM 12333]
          Length = 263

 Score =  208 bits (529), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 77/260 (29%), Positives = 131/260 (50%), Gaps = 4/260 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSIRAR   +AAW++ ++ D++ LQETK  D+ FP  +  ++ Y +   G  
Sbjct: 1   MRIATWNVNSIRARAERVAAWLERSDVDVLALQETKVPDEQFPVMSFAAVGYDVVHHGHS 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ-TLRIGNLYLPHGNPITST 122
            +NGVAI+S+    ++    PG          EA     T   +R+ +LY+P+G  +   
Sbjct: 61  QWNGVAIVSRVGIDDVELGFPGQPTWGDPAVAEARALGATCGGVRLWSLYVPNGRTLEDP 120

Query: 123 KYDDKISWIKRFLRFASQR-LELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            Y  K+ W++     A+    E    +  AGD+NI P   D ++  +++     +   R 
Sbjct: 121 HYAYKLDWLRALRDAAATWAAEPGAQVALAGDWNIAPLDEDVWDMSLFDGATHVSPAERA 180

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           +F  L + GF +  R        Y++WDY    + +N+G+RID ++ +      + +  I
Sbjct: 181 AFAALDDAGFAEVTRLHVP--QAYTYWDYQRLRFPRNEGMRIDFVLATRALAERVAAVGI 238

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
           D + R     SDH PV+V +
Sbjct: 239 DREERKGKGASDHVPVVVEI 258


>gi|325497093|gb|EGC94952.1| exonuclease III [Escherichia fergusonii ECD227]
          Length = 329

 Score =  208 bits (529), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 77/268 (28%), Positives = 124/268 (46%), Gaps = 8/268 (2%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + +   ++N+N +RAR H L A ++++ PD+I LQETK  D  FP E +  L Y++   G
Sbjct: 60  ATMKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHG 119

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           QK + GVA+L+K  PI +    PGD  + Q R I A        + + N Y P G     
Sbjct: 120 QKGHYGVALLTKETPIAVRRGFPGDGEEAQRRIIMAEIPSPLGNVTVINGYFPQGESRDH 179

Query: 122 TK-YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDAC 174
              +  K  + +    +    L+ + P++  GD NI P         +     +      
Sbjct: 180 PIKFPAKAQFYQNLQNYLETELKRDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCS 239

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
           F  E R+  ++L + G  D  R  +      +S++DY +  +  N+G+RID ++ S    
Sbjct: 240 FLPEEREWMERLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLA 299

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSL 261
                  ID + R   KPSDH PV  + 
Sbjct: 300 ECCVETGIDYEIRSMEKPSDHAPVWATF 327


>gi|70731287|ref|YP_261028.1| exonuclease III [Pseudomonas fluorescens Pf-5]
 gi|68345586|gb|AAY93192.1| exodeoxyribonuclease III [Pseudomonas fluorescens Pf-5]
          Length = 270

 Score =  208 bits (529), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 90/269 (33%), Positives = 135/269 (50%), Gaps = 11/269 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +RAR H LAA I ++ PD+I LQETK  D+ FP   +Q+L YH+   GQK
Sbjct: 1   MKIVSFNINGLRARPHQLAALIDKHQPDVIGLQETKVADEQFPLADIQALGYHVHYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122
            + GVA+LS+  P+ +     GDD D Q RFI  TF   N   + I N Y P G      
Sbjct: 61  GHYGVALLSRQAPLALHKGFEGDDEDAQRRFIWGTFADANGTPVTIMNGYFPQGESRDHP 120

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175
            K+  K  + +        R   ++PL+  GD NI P+  D           +      F
Sbjct: 121 TKFPAKERFYQDLQHLLESRFSNDQPLVVMGDVNISPEDCDIGIGAENAKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232
             E R+   +L+N G  D+ R  +   +  +S++DY +  +     +G+RID IM S   
Sbjct: 181 LPEEREWMARLKNWGLVDSFRHLNPEVNDRFSWFDYRSRGFEDEPKRGLRIDLIMASQGL 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
              +  A +D + RG  KPSDH P+ + L
Sbjct: 241 LPRVKDAGVDYELRGMEKPSDHAPIWLEL 269


>gi|238786156|ref|ZP_04630108.1| Exodeoxyribonuclease III [Yersinia bercovieri ATCC 43970]
 gi|238712925|gb|EEQ04985.1| Exodeoxyribonuclease III [Yersinia bercovieri ATCC 43970]
          Length = 271

 Score =  208 bits (529), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 84/271 (30%), Positives = 129/271 (47%), Gaps = 8/271 (2%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           M  +   ++N+N +RAR H LAA I+++ PD+I LQETK  D  FP E +    YH+   
Sbjct: 1   MLTMKFVSFNINGLRARPHQLAAIIEQHQPDVIGLQETKVHDDMFPLEDVSQHGYHVFYH 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           GQK + GVA+L+K +P+ +    P D+ D Q R I A        L + N Y P G    
Sbjct: 61  GQKGHYGVALLTKEKPLAVRRGFPTDEEDAQRRIIMADIATPQGPLTVINGYFPQGESRD 120

Query: 121 STK-YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDA 173
               +  K  +     ++  Q+   +  L+  GD NI P         +     +     
Sbjct: 121 HPIKFPAKERFYADLQQYLEQQHSADSQLLIMGDINISPTDLDIGIGEENRKRWLRTGKC 180

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
            F  E R    +LQN G  D  RA +   +  +S++DY +  + +N+G+RID ++ S   
Sbjct: 181 SFLPEERAWLAQLQNWGLVDTFRAANPECNDQFSWFDYRSRGFDENRGLRIDLLLASHPL 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            +   +  ID + RG  KPSDH PV     +
Sbjct: 241 AARCIATGIDYEIRGMEKPSDHAPVWSEFAL 271


>gi|162148012|ref|YP_001602473.1| putative exodeoxyribonuclease III [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|161786589|emb|CAP56171.1| putative exodeoxyribonuclease III [Gluconacetobacter diazotrophicus
           PAl 5]
          Length = 259

 Score =  208 bits (529), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 98/260 (37%), Positives = 140/260 (53%), Gaps = 3/260 (1%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           ++ +A+WNVNS+R R  ++  W++   PD++ LQE K ED +FP E  ++  Y     GQ
Sbjct: 1   MMKIASWNVNSVRQRQAHVLDWLEREKPDLLGLQEIKCEDASFPAEAFRAAGYDCVVVGQ 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           KSYNGVAILS+                           I    L  GNLYLP+GN   S 
Sbjct: 61  KSYNGVAILSRLPFSVTAR---ALPFLDGEALQARYVEIEAGGLTFGNLYLPNGNSGGSA 117

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
            Y+ K+++++     A   LE     + AGDYN+ P   DC    +   DA    E R +
Sbjct: 118 GYEAKLAFMEALALHARALLEAGRDFVLAGDYNVCPTDEDCAPGALPPTDALVRPESRAA 177

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F++L  +G TDA+RA H     Y+FWDY A +W ++ G+RIDH +LSP     L SA+ D
Sbjct: 178 FRRLIWLGLTDALRALHPHGRYYTFWDYQAGAWPRDCGLRIDHALLSPRIAERLDSAQPD 237

Query: 243 TKPRGWTKPSDHTPVIVSLD 262
              RG  +PSDH P++++LD
Sbjct: 238 RDERGRAQPSDHVPLVITLD 257


>gi|330817688|ref|YP_004361393.1| Exodeoxyribonuclease III Xth [Burkholderia gladioli BSR3]
 gi|327370081|gb|AEA61437.1| Exodeoxyribonuclease III Xth [Burkholderia gladioli BSR3]
          Length = 258

 Score =  208 bits (529), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 87/259 (33%), Positives = 129/259 (49%), Gaps = 1/259 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+  R  ++  W+  ++ D++CLQE K  D  FP   L++  Y     GQK
Sbjct: 1   MKIATWNVNSLNVRKQHVLDWLATSHADVLCLQELKLTDDKFPKADLEAAGYRSWFTGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAIL +       T +  +    +              +RI + Y P+G    S K
Sbjct: 61  TYNGVAILVRDTLGVDETDVVKNIPGFEDPQQRV-IAATVNGVRIVSAYFPNGQAPDSEK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W+     +    L     L   GDYNI P+  D ++P  WE     + + R  F
Sbjct: 120 FVYKLQWLDALRAWLKDELTRHPKLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             L  MGF DA R        +++WDY    + +N G+RIDHI+LSP     L +  +D 
Sbjct: 180 AALLEMGFVDAFRRFEQPEKTFTWWDYRMMGFRRNAGLRIDHILLSPALAGTLTACEVDR 239

Query: 244 KPRGWTKPSDHTPVIVSLD 262
            PR W +PSDHTPVI +++
Sbjct: 240 VPRTWEQPSDHTPVIATIE 258


>gi|319763690|ref|YP_004127627.1| exodeoxyribonuclease iii xth [Alicycliphilus denitrificans BC]
 gi|317118251|gb|ADV00740.1| exodeoxyribonuclease III Xth [Alicycliphilus denitrificans BC]
          Length = 258

 Score =  208 bits (529), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 92/258 (35%), Positives = 143/258 (55%), Gaps = 1/258 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+NS+  R+  + AW+  N  D I LQE K  D+ FP +  ++  YH    GQK
Sbjct: 1   MHLATWNINSLSVRLPQVLAWLAANPVDAIGLQELKLVDEKFPHDAFEAAGYHAVCFGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAI+S+  P ++V ++PG D +       AT  +    LR+ N Y  +G    + K
Sbjct: 61  TYNGVAIVSRTPPRDVVRNIPGHDDEQARVI-AATLDVEGGPLRLVNCYFVNGQAPGTDK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W+     +    L     L+  GD+N+ P+  D Y+P+  ++    T+E RQ F
Sbjct: 120 FAYKLQWLAALHDWLRAELAAHPRLVLVGDFNVAPEDRDSYDPVGLKDTIHHTVEERQHF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           ++L  +G TDA R        YS+WDY    + KN+G+RIDHI++S    + + + RID 
Sbjct: 180 RQLLELGLTDAFRMFEQPEKSYSWWDYRQLGFQKNRGLRIDHILVSEALRAGVTACRIDR 239

Query: 244 KPRGWTKPSDHTPVIVSL 261
            PR   +PSDH PV+ +L
Sbjct: 240 APRKNPQPSDHAPVVATL 257


>gi|322832771|ref|YP_004212798.1| exodeoxyribonuclease III [Rahnella sp. Y9602]
 gi|321167972|gb|ADW73671.1| exodeoxyribonuclease III [Rahnella sp. Y9602]
          Length = 269

 Score =  208 bits (529), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 84/268 (31%), Positives = 130/268 (48%), Gaps = 8/268 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H LAA I+++ PD+I LQETK  D  FP E +    YH+   GQK
Sbjct: 1   MKFVSFNINGLRARPHQLAAIIEQHQPDVIGLQETKVHDDMFPLEEVSQHGYHVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122
            + GVA+L+K +P+ +    PGDD + Q R I          L + N Y P G       
Sbjct: 61  GHYGVAMLTKQEPVAVRRGFPGDDEESQRRIIMTDIETPQGILTVINGYFPQGESRDHPT 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  + +    + +  L +  P++  GD NI P         D     +      F 
Sbjct: 121 KFPAKEKFYRDLQDYLTTSLSVNNPVVVMGDVNISPTDLDIGIGEDSRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+   +L+  G  D  RA +      +S++DY +  + +N+G+RID IM S    + 
Sbjct: 181 PEEREWMDRLKGWGLIDTFRAANPDTADKFSWFDYRSRGFDENRGLRIDLIMASTPLAAR 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             +  ID   RG  +PSDH P+  + D+
Sbjct: 241 CIATGIDYDIRGMERPSDHAPIWATFDL 268


>gi|295096134|emb|CBK85224.1| Exodeoxyribonuclease III [Enterobacter cloacae subsp. cloacae NCTC
           9394]
          Length = 268

 Score =  208 bits (529), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 81/268 (30%), Positives = 127/268 (47%), Gaps = 8/268 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A ++++ PD+I LQETK  D  FP E +  L Y++   GQK
Sbjct: 1   MKFVSFNINGLRARPHQLEAIVEQHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122
            + GVA+L+K  P+ +    PGDD + Q R I A        + + N Y P G      T
Sbjct: 61  GHYGVALLTKDTPVSVRRGFPGDDEEAQRRIIMAEIPSALGNVTVINGYFPQGESRDHET 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  + +    + +  L+ E P++  GD NI P         +     +      F 
Sbjct: 121 KFPAKAKFYQDLQNYLTTELKKENPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+  ++L   G  D  R  +  T   +S++DY +  +  N+G+RID ++ S      
Sbjct: 181 PEEREWMERLLGWGLVDTFRTANPATQDRFSWFDYRSKGFDDNRGLRIDLLLASAPLAER 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                ID   R   KPSDH PV  +  +
Sbjct: 241 CIETGIDYDIRSMEKPSDHAPVWATFKL 268


>gi|283478229|emb|CAY74145.1| xthA [Erwinia pyrifoliae DSM 12163]
          Length = 300

 Score =  208 bits (529), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 82/268 (30%), Positives = 123/268 (45%), Gaps = 8/268 (2%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
            V+   ++N+N +RAR H L A ++++ PD+I LQETK  D  FP E + SL YH+   G
Sbjct: 31  RVMKFVSFNINGLRARPHQLQAIVEQHQPDVIGLQETKVHDDMFPLEEVASLGYHVFCHG 90

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           QK + GVA+L K QP+ +     GD+ D Q R I A        L + N Y P G     
Sbjct: 91  QKGHYGVALLCKQQPVAVRRGFAGDNEDAQRRIIMADILTPAGPLTVINGYFPQGESRDH 150

Query: 122 T-KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDAC 174
             K+  K  + +    +  Q+ + +  L+  GD NI           +     +      
Sbjct: 151 PTKFPAKEKFYRDLQSYLEQQQKADNQLLIMGDMNISSSDLDIGIGEESRKRWLRTGKCS 210

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
           F  E R+    L N G  D  R  +   +  +S++DY +  +  N+G+RID I+ S    
Sbjct: 211 FLPEEREWMSTLMNWGLYDTWRTQNATVNDRFSWFDYRSKGFDDNRGLRIDLILASRPLA 270

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSL 261
               +  ID   R   KPSDH P+    
Sbjct: 271 DRCVATGIDYDIRAMEKPSDHAPIWAEF 298


>gi|37519709|ref|NP_923086.1| exodeoxyribonuclease III [Gloeobacter violaceus PCC 7421]
 gi|35210700|dbj|BAC88081.1| exodeoxyribonuclease III [Gloeobacter violaceus PCC 7421]
          Length = 258

 Score =  208 bits (529), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 93/261 (35%), Positives = 143/261 (54%), Gaps = 4/261 (1%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           MS +TVATWNVNSI  R+  + AW+  + P+++CLQETK  D+ FP    ++L Y +   
Sbjct: 1   MSNLTVATWNVNSINVRLGGVCAWLSAHRPEVLCLQETKVPDERFPVAAFEALGYEVAFA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           GQK+YNGVAI+S+     +   LPGD+ D   R I AT         I N+Y+P+G+   
Sbjct: 61  GQKAYNGVAIVSRKPVTVVRRGLPGDEADAPRRLIAATVEDTQ----IINVYVPNGSEAG 116

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
           S K+  K+ W++R  ++     + +  ++  GD+NI P+  D ++P        F  +  
Sbjct: 117 SEKFAYKLLWLERLRQYLLADFDPKAAVLLCGDFNIAPEERDVWDPKAVAGKVLFHPDEH 176

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            + ++++  GF DA R        +S+WDY A ++ +N G+RIDHI +S        +  
Sbjct: 177 AALERIRTWGFIDAFRLHSPAAGQFSWWDYRAAAFRRNLGMRIDHIWVSSPLAERCSACW 236

Query: 241 IDTKPRGWTKPSDHTPVIVSL 261
           ID +PR    PSDH PV  S 
Sbjct: 237 IDAQPRAQPSPSDHVPVAASF 257


>gi|85709819|ref|ZP_01040884.1| Probable exodeoxyribonuclease III [Erythrobacter sp. NAP1]
 gi|85688529|gb|EAQ28533.1| Probable exodeoxyribonuclease III [Erythrobacter sp. NAP1]
          Length = 272

 Score =  208 bits (529), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 97/269 (36%), Positives = 150/269 (55%), Gaps = 8/269 (2%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           S + +AT+N+N I+AR+  L  W++E  P + CLQE K++DK+FP    + L Y     G
Sbjct: 3   SAMKIATYNINGIKARLPRLKEWLEETRPAVACLQEVKSQDKDFPASEFEELGYQAIWHG 62

Query: 62  QKSYNGVAILSKYQPIEIVT--------HLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
           QK++NGVAIL+  +                P +    QAR++E   T  + T RI  +YL
Sbjct: 63  QKAFNGVAILADTKAGYSAKEVQRGLGIDGPKEGEGEQARYLEVDVTRESSTCRIVCIYL 122

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
           P+GNP    K+D K++W+++     +Q  E E P    GD+N+IP+  D ++     +DA
Sbjct: 123 PNGNPQPGPKFDYKLAWMEKLRGRMAQIWESEVPAAVLGDFNVIPEDDDVFSVKAMASDA 182

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
               E R ++ +L   G+TDA+R  +    ++++WDY A +W ++ G RIDHI+LSPE  
Sbjct: 183 LMQPESRAAYARLLADGWTDALRTHNPRGGVWTYWDYQAGAWQRDHGFRIDHILLSPELA 242

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
             L S  +D + RG  K SDH P    L+
Sbjct: 243 DRLVSVGVDREHRGREKASDHAPTWAKLN 271


>gi|157370955|ref|YP_001478944.1| exonuclease III [Serratia proteamaculans 568]
 gi|157322719|gb|ABV41816.1| exodeoxyribonuclease III [Serratia proteamaculans 568]
          Length = 268

 Score =  208 bits (529), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 85/268 (31%), Positives = 133/268 (49%), Gaps = 8/268 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H LAA I+++ PD+I LQETK  D  FP E +    YH+   GQK
Sbjct: 1   MKFVSFNINGLRARPHQLAAIIEQHQPDVIGLQETKVHDDMFPLEEVSQHGYHVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122
            + GVA+L+K +P+ +    P DD D Q R I A       TL + N Y P G       
Sbjct: 61  GHYGVALLTKEKPLAVRRGFPTDDEDAQRRIIMADLATPQGTLTVINGYFPQGESRDHPT 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC------YNPIIWENDACFT 176
           K+  K  + +    +  Q++ ++ P++  GD NI P  +D           +      F 
Sbjct: 121 KFPAKTRFYQDLQNYLEQQMSVDSPVLVMGDVNISPSDYDIGIGEESRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+   +L N G  D  R  +   +  +S++DY +  + +N+G+RID ++ S    + 
Sbjct: 181 PEEREWMDRLMNWGLVDTYRHANPERNDQFSWFDYRSRGFDENRGLRIDLLLASTPLAAR 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             +  ID + RG  KPSDH PV     +
Sbjct: 241 CTATGIDYQIRGMEKPSDHAPVWAEFSL 268


>gi|260463071|ref|ZP_05811274.1| exodeoxyribonuclease III Xth [Mesorhizobium opportunistum WSM2075]
 gi|259031192|gb|EEW32465.1| exodeoxyribonuclease III Xth [Mesorhizobium opportunistum WSM2075]
          Length = 256

 Score =  208 bits (528), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 90/257 (35%), Positives = 132/257 (51%), Gaps = 3/257 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+N+N+I +R+ NL AW+    PD++CLQE K  D  FP   L    Y     G+ 
Sbjct: 1   MKIATFNINNINSRLENLLAWLAAARPDVVCLQELKARDMQFPRTALADAGYGAVWKGEP 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           ++NGVAIL++     +                          + I  LY P+GNP    K
Sbjct: 61  TWNGVAILARGAEPILTRDAL---PGDDGDKQSRYIEAAVNGIVIACLYAPNGNPRPGPK 117

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K++W +R    A Q ++   P++ AGDYNI+P+P D Y    ++++A    E R +F
Sbjct: 118 FQYKLAWHERLNAHAEQLIDTGLPVVLAGDYNIVPEPRDIYATRSYDDNALVQPESRAAF 177

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             L   G+TDA+R  H    LY+FWDY  + W ++ G+R+DHI+LS      L  A ID 
Sbjct: 178 AALLEQGWTDALRKKHPNETLYTFWDYRRNRWPRDAGLRLDHILLSKTLARRLKGAGIDR 237

Query: 244 KPRGWTKPSDHTPVIVS 260
             RG    SDH PV V 
Sbjct: 238 DVRGQDGASDHAPVWVE 254


>gi|261821541|ref|YP_003259647.1| exonuclease III [Pectobacterium wasabiae WPP163]
 gi|261605554|gb|ACX88040.1| exodeoxyribonuclease III [Pectobacterium wasabiae WPP163]
          Length = 272

 Score =  208 bits (528), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 90/266 (33%), Positives = 127/266 (47%), Gaps = 8/266 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V ++N+N +RAR H LAA I+++ PD+I LQETK  D  FP E +    YH+   GQK
Sbjct: 5   MKVVSFNINGLRARPHQLAAIIEQHQPDVIGLQETKVHDDMFPLEDVSQYGYHVYYHGQK 64

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122
            + GVA+L K QPI +    P D+ D Q R I A F     TL + N Y P G       
Sbjct: 65  GHYGVALLCKEQPIAVRRGFPTDEDDAQRRIIMADFATEHGTLTVVNGYFPQGESRDHPV 124

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  + +    +  Q     +PLI  GD NI P         +     +      F 
Sbjct: 125 KFPAKTRFYQDLQTYLEQHHSATQPLIVMGDVNISPTDLDIGIGEENRKRWLRTGKCSFL 184

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+   +LQ  G  D  RA +   +  +S++DY +  +  N+G+RID I+ S      
Sbjct: 185 PEEREWMARLQGWGLIDTFRAANPESNDRFSWFDYRSAGFDDNRGLRIDLILASTFLAER 244

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
             +  ID   RG  KPSDH P+    
Sbjct: 245 CVATGIDYDIRGMEKPSDHAPIWAEF 270


>gi|293395887|ref|ZP_06640169.1| exodeoxyribonuclease III [Serratia odorifera DSM 4582]
 gi|291421824|gb|EFE95071.1| exodeoxyribonuclease III [Serratia odorifera DSM 4582]
          Length = 268

 Score =  208 bits (528), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 88/268 (32%), Positives = 130/268 (48%), Gaps = 8/268 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H LAA I+++ PD+I LQETK  D  FP E +    YH+   GQK
Sbjct: 1   MKFVSFNINGLRARPHQLAAIIEQHQPDVIGLQETKVHDDMFPLEEVSKHGYHVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122
            + GVA+L+K  PI +    P DD D Q R I A        L + N Y P G       
Sbjct: 61  GHYGVALLTKEAPIAVRRGFPTDDDDAQRRIIMADLETPQGMLTVINGYFPQGESRDHPV 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACFT 176
           K+  K  + +    +  Q+L +E P++  GD NI P  +D           +      F 
Sbjct: 121 KFPAKTRFYQDLQDYLEQQLSVENPVLIMGDMNISPSDYDIGIGEENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+   +L N G  D  R  +   +  +S++DY +  +  N+G+RID ++ S    + 
Sbjct: 181 PEEREWMGRLLNWGLVDTYRQANPERNDQFSWFDYRSKGFDDNRGLRIDLLLASTPLAAR 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             +  ID + R   KPSDH PV    DI
Sbjct: 241 CVATGIDYQTRSMEKPSDHAPVWAEFDI 268


>gi|183980766|ref|YP_001849057.1| exodeoxyribonuclease III protein XthA [Mycobacterium marinum M]
 gi|183174092|gb|ACC39202.1| exodeoxyribonuclease III protein XthA [Mycobacterium marinum M]
          Length = 276

 Score =  208 bits (528), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 78/266 (29%), Positives = 124/266 (46%), Gaps = 7/266 (2%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
            + +ATWNVNSIR R+  +  W++  + D++ +QETK  D  FP   L  L Y +   G 
Sbjct: 5   TLRLATWNVNSIRTRLPRVLDWLERADVDVLAIQETKCSDTQFPALPLFELGYEVAHVGF 64

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT-----LRIGNLYLPHGN 117
             +NGVAI S+    ++     G         + A             +R+ +LY+P+G 
Sbjct: 65  NQWNGVAIASRVGIDDVQIGFDGQPAWSGKPEVAAAAEARAVGATCGGVRVWSLYVPNGR 124

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEE--PLIFAGDYNIIPQPHDCYNPIIWENDACF 175
            +    Y  K+ W+      A   L+ +   P+  AGD+NI P   D ++   +      
Sbjct: 125 ALEDPHYTYKLDWLAALRDTAQCWLKNDPGAPIALAGDFNIAPTDEDVWSTEFFTGATHV 184

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
           +   R++F  + +  FTD +R       +Y++WDY    + K +G+RID I+ SP     
Sbjct: 185 SEPERKAFNAIVDAQFTDLVRPFTPGPGVYTYWDYTQLRFPKKQGMRIDFILGSPALAGR 244

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
           +  A+I    R    PSDH PV V L
Sbjct: 245 VVDAQIVRDERKGKAPSDHAPVFVDL 270


>gi|225077187|ref|ZP_03720386.1| hypothetical protein NEIFLAOT_02242 [Neisseria flavescens
           NRL30031/H210]
 gi|224951478|gb|EEG32687.1| hypothetical protein NEIFLAOT_02242 [Neisseria flavescens
           NRL30031/H210]
          Length = 256

 Score =  208 bits (528), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 91/259 (35%), Positives = 138/259 (53%), Gaps = 4/259 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+  R+  +  W+ ++  DI+ LQE K +   FP   LQ + +H    GQK
Sbjct: 1   MKIATWNVNSLNVRLPQVQNWLADHQADILALQELKLDQDKFPAAALQMMGWHCVWSGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAI+S+++P ++   LP    D Q R I AT       +R+ N+Y  +G  + S K
Sbjct: 61  TYNGVAIISRHEPQDVHCGLPALPDDPQRRVIAATING----VRVINVYCVNGEALDSPK 116

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K  W      F    + +   L+  GD+NI P   DCY+P  W      +   RQ F
Sbjct: 117 FQYKEQWFAALTEFVRTEMAVHPKLVLLGDFNIAPADADCYDPEKWHEKIHCSSIERQWF 176

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + L ++G TD++R  H     Y+++DY    + +  G+RIDHI+ SPE  + L    +D 
Sbjct: 177 KTLLDLGLTDSLRKVHPEGAFYTWFDYRGAMFQRKLGLRIDHILTSPELAATLTDVTVDL 236

Query: 244 KPRGWTKPSDHTPVIVSLD 262
           + R   +PSDH PVI   D
Sbjct: 237 ETRAQERPSDHAPVIAEFD 255


>gi|319639504|ref|ZP_07994253.1| exodeoxyribonuclease III [Neisseria mucosa C102]
 gi|317399270|gb|EFV79942.1| exodeoxyribonuclease III [Neisseria mucosa C102]
          Length = 256

 Score =  208 bits (528), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 91/259 (35%), Positives = 137/259 (52%), Gaps = 4/259 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+  R+  +  W+ ++  DI+ LQE K +   FP   LQ + +H    GQK
Sbjct: 1   MKIATWNVNSLNVRLPQVQNWLADHQADILALQELKLDQDKFPAAALQMMGWHCVWSGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAI+S+++P ++   LP    D Q R I AT       +R+ N+Y  +G  + S K
Sbjct: 61  TYNGVAIISRHEPQDVHCGLPALPDDPQRRVIAATING----VRVINVYCVNGEALDSPK 116

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K  W      F    +     L+  GD+NI P   DCY+P  W      +   RQ F
Sbjct: 117 FQYKEQWFAALTEFVRAEMAAHPKLVLLGDFNIAPADADCYDPEKWHEKIHCSSIERQWF 176

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + L ++G TD++R  H     Y+++DY    + +  G+RIDHI+ SPE  + L    +D 
Sbjct: 177 KNLLDLGLTDSLRKVHPEGAFYTWFDYRGAMFQRKLGLRIDHILTSPELAANLTDVTVDL 236

Query: 244 KPRGWTKPSDHTPVIVSLD 262
           + R   +PSDH PVI   D
Sbjct: 237 ETRAQERPSDHAPVIAEFD 255


>gi|146311351|ref|YP_001176425.1| exonuclease III [Enterobacter sp. 638]
 gi|145318227|gb|ABP60374.1| Exodeoxyribonuclease III [Enterobacter sp. 638]
          Length = 268

 Score =  208 bits (528), Expect = 9e-52,   Method: Composition-based stats.
 Identities = 85/268 (31%), Positives = 127/268 (47%), Gaps = 8/268 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A ++++ PD+I LQETK  D  FP E +  L Y++   GQK
Sbjct: 1   MKFVSFNINGLRARPHQLEAIVEQHQPDVIGLQETKVHDDMFPLEDVAKLGYNVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122
            + GVA+L+K  PI +    PGDD + Q R I A        + + N Y P G       
Sbjct: 61  GHYGVALLTKQTPISVRRGFPGDDGEAQRRIIMAEIPSPLGNITVINGYFPQGESRDHPT 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  + +    + +  L  E P++  GD NI P         D     +      F 
Sbjct: 121 KFPAKAKFYQDLQDYLTTELNKENPVLIMGDVNISPTDLDIGIGEDSRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+  Q+LQ+ G  D  RA +      +S++DY +  +  N+G+RID ++ S      
Sbjct: 181 PEEREWMQRLQSWGLVDTFRAANPDTQDRFSWFDYRSKGFDDNRGLRIDLLLASAPLAER 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                ID   RG  KPSDH PV     +
Sbjct: 241 CIETGIDYDIRGMEKPSDHAPVWAKFKL 268


>gi|114330240|ref|YP_746462.1| exodeoxyribonuclease III Xth [Nitrosomonas eutropha C91]
 gi|114307254|gb|ABI58497.1| Exodeoxyribonuclease III [Nitrosomonas eutropha C91]
          Length = 254

 Score =  208 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 91/258 (35%), Positives = 138/258 (53%), Gaps = 5/258 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS++ R+  +  W+  N PD++CLQETK +D+ FP + L    Y     GQK
Sbjct: 1   MKIATWNVNSLKVRLQQVIDWLNVNQPDVLCLQETKLQDEFFPVDELAQAGYQSIYAGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVA+LSK   +++   LP  D   +              LRI  +Y+P+G  + S K
Sbjct: 61  TYNGVALLSKVTGVDVCAALPDFDDPQKRLIAATYGD-----LRIICVYVPNGERVDSEK 115

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W+     F  Q       +   GD+NI P+  D Y+P  W+     +   RQ+F
Sbjct: 116 YAYKLRWLSILNSFLQQERTRYGKVALLGDFNIAPEDRDVYDPEAWKGQVLCSEAERQAF 175

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + L + GF D+         +Y++WDY   ++ +N+G+RIDHI+LS E      + ++D 
Sbjct: 176 RGLLDTGFVDSFHLFEQPEKIYTWWDYRMMAFRRNRGLRIDHILLSHETADSCATWQVDK 235

Query: 244 KPRGWTKPSDHTPVIVSL 261
            PR   +PSDH PV V L
Sbjct: 236 APRKLERPSDHAPVWVEL 253


>gi|188581164|ref|YP_001924609.1| exodeoxyribonuclease III Xth [Methylobacterium populi BJ001]
 gi|179344662|gb|ACB80074.1| exodeoxyribonuclease III Xth [Methylobacterium populi BJ001]
          Length = 264

 Score =  208 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 115/261 (44%), Positives = 160/261 (61%), Gaps = 3/261 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + TWNVNSI+ R+ +L  ++ E  PD++CLQE K +D +FP E +++  Y +ET GQK
Sbjct: 1   MRITTWNVNSIKQRVGHLLGFLDEAKPDVVCLQELKCQDTSFPREEIEAAGYAVETLGQK 60

Query: 64  SYNGVAILSKYQPIEIV--THLPGDDLDVQARFIEATFTINTQ-TLRIGNLYLPHGNPIT 120
           +YNGVA+L +           LPGD  D QAR+IEA         +RI ++YLP+GNP  
Sbjct: 61  AYNGVALLVRAPLQYTQLLRGLPGDAEDEQARYIEALVHGEGVAPVRIASIYLPNGNPAP 120

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             KY  K++++ R    A   +  E+ L+ AGD+N+IP+P D  +P  W  DA F  E R
Sbjct: 121 GPKYSYKLAFMARLKAHARALMASEDALVLAGDFNVIPEPEDAADPAAWTQDALFLPETR 180

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           ++F+ L   GFTD +RA   +  LY+FWDY A  W +N GIRIDH++LSP+A   L SA 
Sbjct: 181 RAFRALLAEGFTDGLRACEPSAGLYTFWDYQAGCWPRNFGIRIDHLLLSPQAADRLVSAS 240

Query: 241 IDTKPRGWTKPSDHTPVIVSL 261
           +    RG  KPSDH PV V L
Sbjct: 241 VQKHLRGLEKPSDHVPVTVEL 261


>gi|88813684|ref|ZP_01128912.1| exodeoxyribonuclease III [Nitrococcus mobilis Nb-231]
 gi|88789071|gb|EAR20210.1| exodeoxyribonuclease III [Nitrococcus mobilis Nb-231]
          Length = 256

 Score =  208 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 93/258 (36%), Positives = 146/258 (56%), Gaps = 5/258 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A+WNVNS++ R+  +  W+K   PD++ LQETK  D++FP E L++  Y +   GQK
Sbjct: 1   MKLASWNVNSLKVRLPQVLEWLKTAQPDLLGLQETKVPDEHFPSEALRAAGYEVVYSGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVA+LS++   E++T     +L   A        +    LR  NLY+P+G  + S K
Sbjct: 61  TYNGVAVLSRWSITEMLT-----ELPTLADPQRRVLAVTAAGLRFINLYVPNGQAVGSDK 115

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W+     + ++ LE     I  GD+NI PQ  D ++P  W      +   R++ 
Sbjct: 116 YAYKLDWLAHLRGWLAEELERWPRSIVVGDFNIAPQDQDVHDPQQWHEQVLCSTPEREAL 175

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q L  +GF D+ R       ++S+WDY  +S+ +N+G+RID I+ S   T  L ++ +D 
Sbjct: 176 QALLALGFADSFRQFPQEPGIFSWWDYRMNSFRRNRGLRIDLILSSAALTRTLTASYVDR 235

Query: 244 KPRGWTKPSDHTPVIVSL 261
            PRGW +PSDH PV+  L
Sbjct: 236 GPRGWPRPSDHAPVVAEL 253


>gi|251789807|ref|YP_003004528.1| exodeoxyribonuclease III [Dickeya zeae Ech1591]
 gi|247538428|gb|ACT07049.1| exodeoxyribonuclease III [Dickeya zeae Ech1591]
          Length = 268

 Score =  208 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 89/268 (33%), Positives = 133/268 (49%), Gaps = 8/268 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H LAA I+++ PD+I LQETK  D  FP + ++   YH+   GQK
Sbjct: 1   MKFVSFNINGLRARPHQLAAIIEQHQPDVIGLQETKVHDDMFPLDEVKQFGYHVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122
            + GVA+L+K +P+ +    P DD D Q R I A       TL + N Y P G       
Sbjct: 61  GHYGVALLTKAEPLAVRRGFPTDDDDAQRRIIMADLATPLGTLTVVNGYFPQGESRDHPV 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACFT 176
           K+  K  + +    +  Q  + E+P++  GD NI P   D           +      F 
Sbjct: 121 KFPAKTRFYQDLQHYLEQHHQSEQPVLIMGDMNISPADQDIGIGEENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+  ++L+N G  D  RA +      +S++DY +  +  N+G+RID IM +P   S 
Sbjct: 181 PEEREWMERLKNWGLVDTFRAANPECQDRFSWFDYRSAGFDDNRGLRIDLIMATPPLASR 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             +  ID   RG  KPSDH PV     +
Sbjct: 241 CAATGIDYAIRGMEKPSDHAPVWAEFTL 268


>gi|78212211|ref|YP_380990.1| exodeoxyribonuclease III [Synechococcus sp. CC9605]
 gi|78196670|gb|ABB34435.1| exodeoxyribonuclease III [Synechococcus sp. CC9605]
          Length = 288

 Score =  208 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 91/276 (32%), Positives = 140/276 (50%), Gaps = 4/276 (1%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           S V +ATWNVNS+R R+  + +W+    PD++CLQETK +D  FP E  +S  +H+   G
Sbjct: 10  STVQIATWNVNSVRTRLDQVLSWLDREQPDLLCLQETKVDDSLFPVEAFKSAGWHVHIHG 69

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR----FIEATFTINTQTLRIGNLYLPHGN 117
           QK+YNGVA++S+    ++     G+  D          +   +     +R+ NLY+P+G+
Sbjct: 70  QKAYNGVALISREPLEDVRCGFVGELPDDAEADDLGAQKRVISALLSGVRVLNLYVPNGS 129

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
            + S KY  K++W+    R+   + +  EPL   GD+NI  +  D  +P         + 
Sbjct: 130 SLKSEKYPYKLTWLGCLKRYLDAQQQRGEPLCMVGDFNIGLEARDLPDPDRQTGGIMASD 189

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
             RQ+ +        D  R        +S+WDY + +W +++G RIDHI L  E   L  
Sbjct: 190 AERQALRDALGDRLQDVFRVFEPDSGHWSWWDYRSGAWDRDRGWRIDHIYLCDELLGLAR 249

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDS 273
           S  I    RG  +PSDH PV V LD P   + + D 
Sbjct: 250 SCVIHKGMRGNQQPSDHAPVSVDLDWPPADEDEGDE 285


>gi|126657177|ref|ZP_01728343.1| Exodeoxyribonuclease III xth [Cyanothece sp. CCY0110]
 gi|126621448|gb|EAZ92159.1| Exodeoxyribonuclease III xth [Cyanothece sp. CCY0110]
          Length = 262

 Score =  208 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 90/262 (34%), Positives = 142/262 (54%), Gaps = 4/262 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSIR R  ++  W+  N+ D++CLQETK  D++FP E  + L YH+   GQK
Sbjct: 1   MKIATWNVNSIRTRKPHVVDWLTNNSIDVLCLQETKVIDQDFPREPFEELGYHVYIYGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT---QTLRIGNLYLPHGNPIT 120
           +YNGVAI S+    +++T       +  A+  +    + +     +RI NLY+P+G  + 
Sbjct: 61  AYNGVAIFSRQPMTDVITGFTPMVGEEIAQQFDEQKRVISGVIDGIRIINLYVPNGASVG 120

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPL-IFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
           S KY+ K+ W K    +    ++ E       GD+NI  +  D YN    EN    +   
Sbjct: 121 SEKYEYKLQWFKVLKAYLDNLIKKESYELCICGDFNIALEDKDIYNSKGKENHIMSSPLE 180

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R++ +K+  +G  DA R        +S+WDY +    +N+G RIDH+ L+ +      + 
Sbjct: 181 REALEKILKIGLKDAFRKFTTEGGHFSWWDYRSGGLQRNRGWRIDHLYLTNKLYEKAVNC 240

Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261
            ID +PR   +PSDHTPVI+ +
Sbjct: 241 TIDIEPRKQERPSDHTPVILEI 262


>gi|221198450|ref|ZP_03571496.1| exodeoxyribonuclease III [Burkholderia multivorans CGD2M]
 gi|221208601|ref|ZP_03581602.1| exodeoxyribonuclease III [Burkholderia multivorans CGD2]
 gi|221171592|gb|EEE04038.1| exodeoxyribonuclease III [Burkholderia multivorans CGD2]
 gi|221182382|gb|EEE14783.1| exodeoxyribonuclease III [Burkholderia multivorans CGD2M]
          Length = 272

 Score =  208 bits (528), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 85/258 (32%), Positives = 134/258 (51%), Gaps = 1/258 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+  R  ++  W+ ++  D++CLQE K  D+ FP   L++  Y     GQK
Sbjct: 15  MKIATWNVNSLNVRKQHVLDWLAQSAVDVLCLQELKLPDEKFPRADLEAAGYRSWFAGQK 74

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAIL++       + +  +    +         +    +RI + Y P+G  + S K
Sbjct: 75  TYNGVAILARDTLPFDESDVVRNIPGFEDTQQRV-IAVTIDGVRIVSAYFPNGQAVGSDK 133

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W+     +    ++    L   GDYNI P+  D ++P  WE +   + + R  F
Sbjct: 134 FLYKMQWLDALHAWLRAEMQRYPKLALLGDYNIAPEDRDVHDPAKWEGENLVSPQERAHF 193

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            KL  +GF DA R        +++WDY   ++ +N G+RIDHI+LSP       S  +D 
Sbjct: 194 AKLIELGFVDAFRRFEQPEKTFTWWDYRMFAFRRNAGLRIDHILLSPALAGSCTSCEVDR 253

Query: 244 KPRGWTKPSDHTPVIVSL 261
            PR W +PSDHTPV+  L
Sbjct: 254 VPRTWEQPSDHTPVVAVL 271


>gi|309379045|emb|CBX22347.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 256

 Score =  207 bits (527), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 91/260 (35%), Positives = 133/260 (51%), Gaps = 4/260 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + TWNVNS+  R+  +   + +N PDI+ LQE K +   FP   LQ + +H    GQK
Sbjct: 1   MKITTWNVNSLNVRLPQVQNLLADNPPDILVLQELKLDQDKFPAAALQMMGWHCVWSGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAI+S+  P ++   LP    D Q R I AT       +R+ N+Y  +G  + S K
Sbjct: 61  TYNGVAIVSRNAPEDVHFGLPSLPDDPQRRVIAATVGG----VRVINVYCVNGEALDSPK 116

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K  W      F    +     L+  GD+NI P   DCY+P  W      +   RQ F
Sbjct: 117 FKYKEQWFAALTEFVRDEMTRYGKLVLLGDFNIAPADADCYDPKKWYEKIHCSSVERQWF 176

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q L ++G TD++R  H     Y+++DY    + +  G+RIDHI++SP     L   R+D 
Sbjct: 177 QNLLDLGLTDSLRQVHPEGVFYTWFDYRGAMFQRKLGLRIDHILVSPAMAEALKDVRVDL 236

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
             R   +PSDH PV    D+
Sbjct: 237 DTRALERPSDHAPVTAEFDL 256


>gi|255066148|ref|ZP_05318003.1| exodeoxyribonuclease III [Neisseria sicca ATCC 29256]
 gi|255049693|gb|EET45157.1| exodeoxyribonuclease III [Neisseria sicca ATCC 29256]
          Length = 256

 Score =  207 bits (527), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 88/260 (33%), Positives = 138/260 (53%), Gaps = 4/260 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + TWNVNS+  R+  +  W+ ++ PD++ LQE K +   FP   LQ + +H    GQK
Sbjct: 1   MKITTWNVNSLNVRLPQVQNWLADHQPDVLVLQELKLDQDKFPAAALQMMGWHSVWSGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAI+S+ +P ++   LP    D Q R I AT       +R+ N+Y  +G  + S K
Sbjct: 61  TYNGVAIISRSEPQDVHVGLPTLPDDPQRRVIAATVNG----VRVINVYCVNGEALDSPK 116

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K  W      F    +   E L+  GD+NI P   DCY+P  W      +   RQ F
Sbjct: 117 FLYKEQWFAALTEFVRDEMTRYEKLVLLGDFNIAPADADCYDPEKWHEKIHCSSIERQWF 176

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + L ++G TD++R  H     Y+++DY    + +  G+RIDH ++SP  +++L    +D 
Sbjct: 177 KNLLDLGLTDSLRQIHPEGAFYTWFDYRGAMFQRKLGLRIDHQLISPALSAVLKDVYVDL 236

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
             R   +PSDH PV+   D+
Sbjct: 237 DARAQERPSDHAPVVAEFDL 256


>gi|146299724|ref|YP_001194315.1| exodeoxyribonuclease III Xth [Flavobacterium johnsoniae UW101]
 gi|146154142|gb|ABQ04996.1| exodeoxyribonuclease III Xth [Flavobacterium johnsoniae UW101]
          Length = 258

 Score =  207 bits (527), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 101/259 (38%), Positives = 147/259 (56%), Gaps = 3/259 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+NVN I  R++ L  W+ E  PDI+CLQE K    NFP + +    Y+    GQK
Sbjct: 1   MKIATYNVNGINGRLNVLLRWLDEAAPDIVCLQELKAPQDNFPLKAINDAGYNAVWHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVAIL++   IE +T                        + I  LYLP+GNP+   K
Sbjct: 61  QWNGVAILARNMKIEEITRTL---PGDDEDVQSRYIEALINGIVIACLYLPNGNPVPGPK 117

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           ++ K+ W  R    A+  L L+ P++  GDYN++P   D Y P  W NDA F  E+R++F
Sbjct: 118 FEYKLKWFDRLAERAAILLSLKVPVLLIGDYNVMPTELDVYKPEKWINDALFKPEIRKAF 177

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             + + G+TDAIR  +    +Y+FWDY+ +++ +N G+RIDH +LSP+  S LHS  +D 
Sbjct: 178 AAIVSQGWTDAIRTLYPDEKIYTFWDYFRNAYQRNAGLRIDHFLLSPQIASALHSGGVDR 237

Query: 244 KPRGWTKPSDHTPVIVSLD 262
             RGW K SDH PV + +D
Sbjct: 238 HVRGWEKTSDHAPVWIQID 256


>gi|119513165|ref|ZP_01632214.1| Exodeoxyribonuclease III xth [Nodularia spumigena CCY9414]
 gi|119462186|gb|EAW43174.1| Exodeoxyribonuclease III xth [Nodularia spumigena CCY9414]
          Length = 260

 Score =  207 bits (527), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 91/260 (35%), Positives = 134/260 (51%), Gaps = 2/260 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSIR R+  +  W+ EN  D++CLQETK  D +FP    + L YH+   GQK
Sbjct: 1   MKIATWNVNSIRTRLEQVIFWLSENPIDVLCLQETKVVDADFPRSPFEELGYHVYFSGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT--LRIGNLYLPHGNPITS 121
           +YNGVA++S+    ++         ++   + E    I      +RI NLY+P+G+ + S
Sbjct: 61  AYNGVALISRQPLTDVSPGFTPILPNIDPLWDEQKRVITGVIDGIRIVNLYVPNGSAVGS 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            KY+ K+ W+     +    L  +  +   GD+NI     D +     +N    +   RQ
Sbjct: 121 EKYEFKLRWLTVLREYLQTLLLSQPGICMCGDFNIALAAEDIHENANPDNHIMSSEPERQ 180

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             + +  +GF DA R        YS+WDY A  + +N+G RIDH  L+P       S  I
Sbjct: 181 GLRDVLELGFADAFRKFTTEGGHYSWWDYRAAGFRRNRGWRIDHHYLTPTLYESAKSCII 240

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
           D  PR   +PSDHTPVIV  
Sbjct: 241 DITPRKLPQPSDHTPVIVEF 260


>gi|270262158|ref|ZP_06190430.1| exodeoxyribonuclease III [Serratia odorifera 4Rx13]
 gi|270044034|gb|EFA17126.1| exodeoxyribonuclease III [Serratia odorifera 4Rx13]
          Length = 268

 Score =  207 bits (527), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 87/268 (32%), Positives = 133/268 (49%), Gaps = 8/268 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L+A I+++ PD+I LQETK  D  FP E +    YH+   GQK
Sbjct: 1   MKFVSFNINGLRARPHQLSAIIEQHQPDVIGLQETKVHDDMFPLEEVSQHGYHVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122
            + GVA+L+K +PI +    P DD D Q R I A       TL + N Y P G       
Sbjct: 61  GHYGVALLTKDEPIAVRRGFPTDDDDAQRRIIMADLATPQGTLTVINGYFPQGESRDHPT 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC------YNPIIWENDACFT 176
           K+  K  + +    +  Q+L +E P++  GD NI P  +D           +      F 
Sbjct: 121 KFPAKSRFYQDLQNYLEQQLSVESPVLVMGDVNISPSDYDIGIGEESRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+   +L N G  D  R  +   +  +S++DY +  + +N+G+RID ++ S    + 
Sbjct: 181 PEEREWMDRLLNWGLVDTYRHANPGRNDEFSWFDYRSRGFDENRGLRIDLLLASTPLAAR 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             +  ID + RG  KPSDH PV     +
Sbjct: 241 CTATGIDYQIRGMEKPSDHAPVWAEFSL 268


>gi|167570556|ref|ZP_02363430.1| exodeoxyribonuclease III [Burkholderia oklahomensis C6786]
          Length = 258

 Score =  207 bits (527), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 84/258 (32%), Positives = 133/258 (51%), Gaps = 1/258 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+  R  ++  W+ +++ D++CLQE K  D+ FP   L++  Y     GQK
Sbjct: 1   MRIATWNVNSLNVRKQHVLDWLAQSDVDVLCLQELKVPDEKFPRADLEAAGYRSWFTGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAIL++       T++  +    +              +RI + Y P+G    S K
Sbjct: 61  TYNGVAILARASLPFGETNVVRNIPGFEDAQQRLIAATIDG-VRIVSAYFPNGQAPDSDK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W+     +    ++    L   GDYNI P+  D ++P  WE     + + R  F
Sbjct: 120 FVYKMQWLDALQAWLKDEMQRYPKLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            +L  +GF DA R        +++WDY   ++ +N G+RIDHI+LSP       S  +D 
Sbjct: 180 AQLLALGFVDAFRRFDQPEKTFTWWDYRMLAFRRNAGLRIDHILLSPALADTCTSCTVDR 239

Query: 244 KPRGWTKPSDHTPVIVSL 261
            PR W +PSDHTPV+  +
Sbjct: 240 VPRTWEQPSDHTPVVAQI 257


>gi|253997905|ref|YP_003049968.1| exodeoxyribonuclease III Xth [Methylovorus sp. SIP3-4]
 gi|253984584|gb|ACT49441.1| exodeoxyribonuclease III Xth [Methylovorus sp. SIP3-4]
          Length = 255

 Score =  207 bits (527), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 89/258 (34%), Positives = 133/258 (51%), Gaps = 5/258 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+  R+ ++  W   N PD++CLQETK ED  FP+E L ++ Y+    GQK
Sbjct: 1   MKLATWNVNSLNVRLPHVLDWCTANQPDVLCLQETKQEDSKFPYEALTAIGYNAIHSGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAILS++        +P    + +              +RI   Y+P+G  + S K
Sbjct: 61  TYNGVAILSRHVLEHPSYGIPDFADEQKRLIAATVKG-----IRIVCAYIPNGQSVDSDK 115

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K++W+          L     L   GDYNI P+  D ++P  W      +   R +F
Sbjct: 116 YQYKLNWLASLTTHLQAELAAHPKLALLGDYNIAPEDRDVHDPAAWLGQVLVSEPERTAF 175

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q L  +G  D  R        +S+WDY    + +N G+RIDHI++S    +   ++ ID 
Sbjct: 176 QGLVGLGLHDTFRLFEQPEASFSWWDYRMAGFRRNLGLRIDHILVSTPLLAACKASWIDK 235

Query: 244 KPRGWTKPSDHTPVIVSL 261
            PR   +PSDHTPV++ L
Sbjct: 236 APRKLERPSDHTPVVLEL 253


>gi|238763171|ref|ZP_04624137.1| Exodeoxyribonuclease III [Yersinia kristensenii ATCC 33638]
 gi|238698670|gb|EEP91421.1| Exodeoxyribonuclease III [Yersinia kristensenii ATCC 33638]
          Length = 271

 Score =  207 bits (527), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 84/271 (30%), Positives = 129/271 (47%), Gaps = 8/271 (2%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           M  +   ++N+N +RAR H LAA I+++ PD+I LQETK  D  FP E +    YH+   
Sbjct: 1   MLTMKFVSFNINGLRARPHQLAAIIEQHQPDVIGLQETKVHDDMFPLEEVSQHGYHVFYH 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           GQK + GVA+L+K +P+ +    P D+ D Q R I A        L + N Y P G    
Sbjct: 61  GQKGHYGVALLTKNEPLAVRRGFPTDEEDAQRRIIMADIATPQGPLTVINGYFPQGESRD 120

Query: 121 STK-YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC------YNPIIWENDA 173
               +  K  +     ++  Q+L  +  ++  GD NI P   D           +     
Sbjct: 121 HPIKFPAKERFYADLQQYLEQQLSSDAQVLIMGDVNISPTDMDIGIGEESRKRWLRTGKC 180

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
            F  E R   ++LQN G  D  RA +   +  +S++DY +  + +N+G+RID ++ S   
Sbjct: 181 SFLPEERAWLERLQNWGLVDTFRAANPDCNDQFSWFDYRSRGFDENRGLRIDLLLASHPL 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            +   +  ID   R   KPSDH PV     +
Sbjct: 241 AARCIATGIDYDIRSMEKPSDHAPVWSEFAL 271


>gi|313499211|gb|ADR60577.1| Exodeoxyribonuclease III [Pseudomonas putida BIRD-1]
          Length = 265

 Score =  207 bits (527), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 103/262 (39%), Positives = 151/262 (57%), Gaps = 5/262 (1%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           M  + +AT+N+N IR+R+  L AW++   PDI CLQE K  D+ FP   L++  Y     
Sbjct: 1   MKALKIATFNINGIRSRLPALLAWLEREQPDIACLQELKAADQQFPRAELEAAGYGSLHH 60

Query: 61  GQKSYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
           GQ S+NGVAIL +   P+E+   LPG + D Q+R++EA        + +  LYLP+GNP 
Sbjct: 61  GQPSWNGVAILVRGSDPLEVRRGLPGLEEDSQSRYLEAA----AHGVLVACLYLPNGNPQ 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K+D K+ W +  ++ A    E   P + AGD+N++P   D YNP  W  DA    E 
Sbjct: 117 PGPKFDYKLHWFECLIQHARSLYESGHPTLLAGDFNVVPTDMDIYNPRSWLKDALLQPES 176

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R  +Q+L + G+ DAIR  +    +Y+FWDY+ + W++N G+RIDH++L+ E    L  A
Sbjct: 177 RACYQRLLDQGWLDAIRHLYPDERVYTFWDYFRNHWARNAGLRIDHLLLNHELAPYLKRA 236

Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261
            +D   R   K SDH PV + L
Sbjct: 237 GVDAWVRNEAKASDHAPVWIEL 258


>gi|313199970|ref|YP_004038628.1| exodeoxyribonuclease III xth [Methylovorus sp. MP688]
 gi|312439286|gb|ADQ83392.1| exodeoxyribonuclease III Xth [Methylovorus sp. MP688]
          Length = 255

 Score =  207 bits (527), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 89/258 (34%), Positives = 133/258 (51%), Gaps = 5/258 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+  R+ ++  W   N PD++CLQETK ED  FP+E L ++ Y+    GQK
Sbjct: 1   MKLATWNVNSLNVRLPHVLDWCTANQPDVLCLQETKQEDSKFPYEALTAIGYNAIHSGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAILS++        +P    + +              +RI   Y+P+G  + S K
Sbjct: 61  TYNGVAILSRHVLEHPSYGIPDFADEQKRLIAATVKG-----IRIVCAYIPNGQSVDSDK 115

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K++W+          L     L   GDYNI P+  D ++P  W      +   R +F
Sbjct: 116 YQYKLNWLASLTTHLQAELAAHPKLALLGDYNIAPEDRDVHDPAAWLGQVLVSEPERNAF 175

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q L  +G  D  R        +S+WDY    + +N G+RIDHI++S    +   ++ ID 
Sbjct: 176 QGLVGLGLHDTFRLFEQPEASFSWWDYRMAGFRRNLGLRIDHILVSTPLLAACKASWIDK 235

Query: 244 KPRGWTKPSDHTPVIVSL 261
            PR   +PSDHTPV++ L
Sbjct: 236 APRKLERPSDHTPVVLEL 253


>gi|227326084|ref|ZP_03830108.1| exonuclease III [Pectobacterium carotovorum subsp. carotovorum
           WPP14]
          Length = 268

 Score =  207 bits (527), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 90/268 (33%), Positives = 129/268 (48%), Gaps = 8/268 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V ++N+N +RAR H LAA I+++ PD+I LQETK  D  FP E +    YH+   GQK
Sbjct: 1   MKVVSFNINGLRARPHQLAAIIEQHQPDVIGLQETKVHDDMFPLEDVGQYGYHVYYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122
            + GVA+L K QPI +    P D+ D Q R I A F     TL + N Y P G       
Sbjct: 61  GHYGVALLCKEQPIAVRRGFPTDEDDAQRRIIMADFATEHGTLTVVNGYFPQGESRDHPV 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  + +    +  Q     +PLI  GD NI P         +     +      F 
Sbjct: 121 KFPAKTRFYQDLQTYLEQHHSATQPLIVMGDVNISPTDLDIGIGEENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+   +LQ+ G  D  RA +   +  +S++DY +  +  N+G+RID I+ S      
Sbjct: 181 PEEREWMARLQDWGLIDTFRAANPDSNDRFSWFDYRSAGFDDNRGLRIDLILASTFLAER 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             +  ID   RG  KPSDH P+     +
Sbjct: 241 CVATGIDYDIRGMEKPSDHAPIWAQFSL 268


>gi|169631267|ref|YP_001704916.1| exodeoxyribonuclease III protein XthA [Mycobacterium abscessus ATCC
           19977]
 gi|169243234|emb|CAM64262.1| Probable exodeoxyribonuclease III protein XthA [Mycobacterium
           abscessus]
          Length = 266

 Score =  207 bits (526), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 79/266 (29%), Positives = 130/266 (48%), Gaps = 7/266 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSIRAR   + +W++ +  D++ +QETK  DK FP +      Y +   G  
Sbjct: 1   MRLATWNVNSIRARADRVISWLERSGTDVLAMQETKCSDKQFPMQAFTDAGYEVAHVGFS 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-----TQTLRIGNLYLPHGNP 118
            +NGVAI S+    ++     G      +  IE              +R+ +LY+P+G  
Sbjct: 61  QWNGVAIASRVGLEDVTVGFEGQPGWSSSEDIEEASEARALGATCNGVRVWSLYVPNGRT 120

Query: 119 ITSTKYDDKISWIKRFLRFASQRLE--LEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
           +    Y  K+ W+      A+  L    ++ +   GD+NI P   D ++   ++     +
Sbjct: 121 LEDPHYQYKLRWLSALRDTAAGWLADAPDQQVALVGDWNIAPTDDDIWSVEAYQGSTHVS 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
              R +F  + + GF D +R       +Y++WDY   S+ K +G+RID ++ SPE    +
Sbjct: 181 EPERSAFTAMNDAGFADVVRPFTPGPGVYTYWDYTQLSFPKKRGMRIDFVLGSPEFAKRV 240

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLD 262
            +A ID + R     SDH PV+V LD
Sbjct: 241 GNAHIDREERKGKGASDHAPVVVDLD 266


>gi|187920658|ref|YP_001889690.1| exodeoxyribonuclease III Xth [Burkholderia phytofirmans PsJN]
 gi|187719096|gb|ACD20319.1| exodeoxyribonuclease III Xth [Burkholderia phytofirmans PsJN]
          Length = 270

 Score =  207 bits (526), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 106/272 (38%), Positives = 155/272 (56%), Gaps = 5/272 (1%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           M+ + +AT+N+N IR+R+  L  W++   PDI+CLQE K  D  FP E L+   Y     
Sbjct: 1   MARLRIATFNINGIRSRLPALLQWLEREAPDIVCLQELKAVDSAFPVEQLRDAGYGAIWQ 60

Query: 61  GQKSYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
           GQ ++NGVAILSK   P+E    LPG + D  +R+IEA        + +  LYLP+GNP 
Sbjct: 61  GQSAWNGVAILSKGEAPLESRRGLPGFEDDTHSRYIEAAVGG----VLVACLYLPNGNPQ 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K+D K++W   F+  A++  +   P++ AGD+N++P   D YNP  W  DA    E 
Sbjct: 117 PGPKFDYKLAWFDHFIEHAAKLYKSAHPVVLAGDFNVVPTDEDIYNPRSWLKDALLQPES 176

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R+ +Q+L   G+TDA+R       +Y+FWDY+   W  N G+RIDH++LS +    L  A
Sbjct: 177 RERYQRLLAQGWTDALRTHFGDERVYTFWDYFRRHWETNSGLRIDHLLLSADLAPRLRDA 236

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271
            +D   RG    SDH P  V L++   R+K+ 
Sbjct: 237 GVDRWVRGEPHASDHAPTWVELEMGATRRKKS 268


>gi|313667795|ref|YP_004048079.1| exodeoxyribonuclease III [Neisseria lactamica ST-640]
 gi|313005257|emb|CBN86690.1| exodeoxyribonuclease III [Neisseria lactamica 020-06]
          Length = 256

 Score =  207 bits (526), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 89/260 (34%), Positives = 133/260 (51%), Gaps = 4/260 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + TWNVNS+  R+  +   + +N PD++ LQE K +   FP   LQ + +H    GQK
Sbjct: 1   MKITTWNVNSLNVRLPQVQNLLADNPPDVLVLQELKLDQDKFPAAALQMMGWHCVWSGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAI+S+  P ++   LP    D Q R I AT       +R+ N+Y  +G  + S K
Sbjct: 61  TYNGVAIVSRSAPEDVYIGLPALPDDPQRRVIAATVGG----VRVINVYCVNGEALDSPK 116

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K  W      F    +     L+  GD+NI P   DCY+P  W      +   RQ F
Sbjct: 117 FKYKEQWFAALTEFVRDEMTRYGKLVLLGDFNIAPADADCYDPEKWYEKIHCSSVERQWF 176

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + L ++G TD++R  H     Y+++DY    + +  G+RIDHI++SP     L   R+D 
Sbjct: 177 KNLLDLGLTDSLRQVHPEGAFYTWFDYRGAMFQRKLGLRIDHILVSPAMAEALKDVRVDL 236

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
             R   +PSDH PV    D+
Sbjct: 237 DTRALERPSDHAPVTAEFDL 256


>gi|237800675|ref|ZP_04589136.1| exonuclease III [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331023534|gb|EGI03591.1| exonuclease III [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 270

 Score =  207 bits (526), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 89/269 (33%), Positives = 137/269 (50%), Gaps = 11/269 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +RAR H LAA I+++ PD+I LQETK  D+ FP   +++L YH+   GQK
Sbjct: 1   MKIVSFNINGLRARPHQLAALIEKHQPDVIGLQETKVSDEQFPHADIEALGYHVHFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122
            + GVA+LS+  P+++     GDD + Q RFI  T+   N Q + I N Y P G      
Sbjct: 61  GHYGVALLSRNPPLDLHKGFEGDDEESQKRFIRGTYADSNGQPVTIMNGYFPQGESRDHP 120

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175
            K+  K  + +            E+PLI  GD NI P+        D     +      F
Sbjct: 121 TKFPAKQRFYENLQSLLESHFSNEQPLIVMGDVNISPEDCDIGIGADNAKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232
             E R+  ++L+N G  D+ R  +      +S++DY +  +     +G+RID IM S   
Sbjct: 181 LPEEREWMERLKNWGLVDSFRYLNPEVSDRFSWFDYRSRGFEDEPKRGLRIDLIMTSTGL 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
              + +A +D   RG  KPSDH P+ + L
Sbjct: 241 QPRIKAAGVDYDLRGMEKPSDHAPIWLEL 269


>gi|295835706|ref|ZP_06822639.1| exodeoxyribonuclease III [Streptomyces sp. SPB74]
 gi|295825643|gb|EDY45706.2| exodeoxyribonuclease III [Streptomyces sp. SPB74]
          Length = 262

 Score =  207 bits (526), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 79/263 (30%), Positives = 130/263 (49%), Gaps = 1/263 (0%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           M  + +ATWNVNSI AR+  L AW++ +  D++C+QETKT  + FP E L+   Y     
Sbjct: 1   MVDMRIATWNVNSITARLPRLLAWLESSGTDVLCVQETKTTAEGFPTEALREAGYESAVN 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
               +NGVA++S+    ++V+ LPG           A        +R+ ++Y+P+G  + 
Sbjct: 61  ATGRWNGVAVISRAGLDDVVSGLPGQPAYDGVMEPRALGATCGP-VRVWSVYVPNGREVG 119

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
              Y  K+ W++      +       P    GDYN+ P   D Y+P ++E     T   R
Sbjct: 120 HPHYAYKLEWLEALRTAVADDAAGARPFAVLGDYNVAPGDEDVYDPAVFEGLTHVTPPER 179

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           ++  KL+  G  D +         Y++WDY   ++ KN+G+RID +  +    +    A 
Sbjct: 180 EALAKLRATGLGDLVPRPLKYDRPYTYWDYRQLAFPKNRGMRIDLVYANAAFRTAAKGAY 239

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263
           +D + R     SDH PV+V L++
Sbjct: 240 VDREERKGKGASDHAPVVVDLEV 262


>gi|108797547|ref|YP_637744.1| exodeoxyribonuclease III [Mycobacterium sp. MCS]
 gi|119866633|ref|YP_936585.1| exodeoxyribonuclease III [Mycobacterium sp. KMS]
 gi|108767966|gb|ABG06688.1| Exodeoxyribonuclease III [Mycobacterium sp. MCS]
 gi|119692722|gb|ABL89795.1| Exodeoxyribonuclease III [Mycobacterium sp. KMS]
          Length = 267

 Score =  207 bits (526), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 81/265 (30%), Positives = 133/265 (50%), Gaps = 7/265 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSIRAR+  +  W++  + D++ +QETK  D+ FP     +L Y +  CG  
Sbjct: 1   MRLATWNVNSIRARVDRVTDWLERADVDVLAMQETKCNDEQFPTMPFAALGYDVVHCGFN 60

Query: 64  SYNGVAILSKYQPIEIVTHL-----PGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
            +NGVAI S+    ++          GD  D++A             +R+ +LY+P+G  
Sbjct: 61  QWNGVAIASRVGLDDVAVGFDGQPTWGDKPDIEAAAEARALGATCAGVRVWSLYVPNGRF 120

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEE--PLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
           + S  Y  K+ W+    + A   L      P+   GD+NI P   D ++   +++    T
Sbjct: 121 VGSPHYAYKLEWLAALRKTAHGWLTENPALPIAMVGDWNIAPTDDDVWSVEAYQDSTHVT 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
              RQ+F ++ + G+ D +R       +Y++WDY   ++ K +G+RID I+ SP     +
Sbjct: 181 PPERQAFTEIVDAGYADVVRPFTPGPGVYTYWDYTRLAFQKRRGMRIDFILGSPAFADRV 240

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSL 261
             A I  + R     SDH PV+V L
Sbjct: 241 THAEIVREERKGKGASDHAPVLVDL 265


>gi|126433169|ref|YP_001068860.1| exodeoxyribonuclease III [Mycobacterium sp. JLS]
 gi|126232969|gb|ABN96369.1| Exodeoxyribonuclease III [Mycobacterium sp. JLS]
          Length = 267

 Score =  207 bits (526), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 81/265 (30%), Positives = 131/265 (49%), Gaps = 7/265 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSIRAR+  +  W++  + D++ +QETK  D+ FP     +L Y +  CG  
Sbjct: 1   MRLATWNVNSIRARVDRVTDWLERADVDVLAMQETKCNDEQFPTMPFAALGYDVVHCGFN 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT-----LRIGNLYLPHGNP 118
            +NGVAI S+    ++     G         IEA             +R+ +LY+P+G  
Sbjct: 61  QWNGVAIASRVGLDDVAVGFDGQPTWCDKPDIEAAAEARALGATCAGVRVWSLYVPNGRF 120

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEE--PLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
           + S  Y  K+ W+    + A   L      P+   GD+NI P   D ++   +++    T
Sbjct: 121 VGSPHYAYKLEWLAALRKTAHGWLTENPALPIAMVGDWNIAPTDDDVWSVEAYQDSTHVT 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
              RQ+F ++ + G+ D +R       +Y++WDY   ++ K +G+RID I+ SP     +
Sbjct: 181 PPERQAFTEIVDAGYADVVRPFTPGPGVYTYWDYTRLAFQKRRGMRIDFILGSPAFADRV 240

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSL 261
             A I  + R     SDH PV+V L
Sbjct: 241 THAEIVREERKGKGASDHAPVLVDL 265


>gi|167563395|ref|ZP_02356311.1| exodeoxyribonuclease III [Burkholderia oklahomensis EO147]
          Length = 258

 Score =  207 bits (526), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 84/258 (32%), Positives = 133/258 (51%), Gaps = 1/258 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+  R  ++  W+ +++ D++CLQE K  D+ FP   L++  Y     GQK
Sbjct: 1   MRIATWNVNSLNVRKQHVLDWLAQSDVDVLCLQELKVPDEKFPRADLEAAGYRSWFTGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAIL++       T++  +    +              +RI + Y P+G    S K
Sbjct: 61  TYNGVAILARASLPFDETNVVRNIPGFEDAQQRLIAATIDG-VRIVSAYFPNGQAPDSDK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W+     +    ++    L   GDYNI P+  D ++P  WE     + + R  F
Sbjct: 120 FVYKMQWLDALQAWLKDEMQRYPKLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            +L  +GF DA R        +++WDY   ++ +N G+RIDHI+LSP       S  +D 
Sbjct: 180 AQLLALGFVDAFRRFDQPEKTFTWWDYRMLAFRRNAGLRIDHILLSPALADTCTSCMVDR 239

Query: 244 KPRGWTKPSDHTPVIVSL 261
            PR W +PSDHTPV+  +
Sbjct: 240 VPRTWEQPSDHTPVVAQI 257


>gi|312885637|ref|ZP_07745272.1| exodeoxyribonuclease III [Mucilaginibacter paludis DSM 18603]
 gi|311301844|gb|EFQ78878.1| exodeoxyribonuclease III [Mucilaginibacter paludis DSM 18603]
          Length = 257

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 95/258 (36%), Positives = 141/258 (54%), Gaps = 3/258 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+NVN +  R+  L  W+ +  PD++CLQE K   + FP + +    Y     GQK
Sbjct: 1   MKIATYNVNGVNGRLPVLLRWLNQTTPDVVCLQELKAPQEKFPEQAIADAGYQAIWHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           S+NGVAIL++   I     +                      + IG LYLP+GNP    K
Sbjct: 61  SWNGVAILTRNLQI---KEIGRALPGDPEDMHSRYIEAVVNGIHIGCLYLPNGNPAPGPK 117

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +D K+ W +R    A+  L    P++  GDYN++P   D Y P  W +DA F  E R +F
Sbjct: 118 FDYKLQWFERLKSHAASLLAAGTPVVLTGDYNVMPTELDVYKPERWLDDALFRPETRAAF 177

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + L + G+TDAIR  + +  +Y+FWDY+ D++ ++ G+RIDH +LSP+    L +A +D 
Sbjct: 178 KDLVDQGWTDAIRKLYPSQKIYTFWDYFRDAYGRDAGLRIDHFLLSPQLDGRLLAAGVDR 237

Query: 244 KPRGWTKPSDHTPVIVSL 261
             RGW K SDH PV + L
Sbjct: 238 NVRGWEKTSDHAPVWIEL 255


>gi|319782509|ref|YP_004141985.1| exodeoxyribonuclease III Xth [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317168397|gb|ADV11935.1| exodeoxyribonuclease III Xth [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 256

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 90/259 (34%), Positives = 138/259 (53%), Gaps = 3/259 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A++N+N+I +R+ NL  W+    PD++CLQE K  D  FP   L +  Y     G+ 
Sbjct: 1   MKIASFNINNINSRLENLLTWLAVAKPDVVCLQELKARDMQFPRSALAAAGYGAVWKGEP 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           ++NGVAIL++     +           +A             + +  LY P+GNP    K
Sbjct: 61  TWNGVAILARSAEPVLTRDAL---PGDEADRQSRYIEAAVNGIVVACLYAPNGNPQPGPK 117

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K++W  R    A Q L+   P++ AGDYNI+P+P D Y    ++++A    E R SF
Sbjct: 118 FAYKLAWHARLEAHAEQLLDTGLPVVLAGDYNIVPEPRDIYATRSYDDNALVQPESRASF 177

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           ++L + G+ DA+R  H    LY+FWDY  + W ++ G+R+DHI+LS +    L +A ID 
Sbjct: 178 RRLLDQGWLDALRKKHPKETLYTFWDYRRNRWPRDAGLRLDHILLSKKLARRLTAAGIDR 237

Query: 244 KPRGWTKPSDHTPVIVSLD 262
             RG    SDH PV V L 
Sbjct: 238 DVRGEDGASDHAPVWVELK 256


>gi|145630665|ref|ZP_01786444.1| exodeoxyribonuclease III [Haemophilus influenzae R3021]
 gi|260582045|ref|ZP_05849840.1| exodeoxyribonuclease III [Haemophilus influenzae NT127]
 gi|144983791|gb|EDJ91241.1| exodeoxyribonuclease III [Haemophilus influenzae R3021]
 gi|260094935|gb|EEW78828.1| exodeoxyribonuclease III [Haemophilus influenzae NT127]
          Length = 267

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 82/267 (30%), Positives = 130/267 (48%), Gaps = 8/267 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A I++  PD+I LQE K  D+ FP+E  ++L YH+   GQK
Sbjct: 1   MKFISFNINGLRARPHQLEAIIEKYQPDVIGLQEIKVADEAFPYEITENLGYHVFHHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122
            + GVA+L+K +P  +    P D+ DVQ R I A        L + N Y P G      T
Sbjct: 61  GHYGVALLTKQEPKAVRRGFPTDNEDVQKRIIMADLETEFGLLTVINGYFPQGESRAHET 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  +     ++  +  +   P++  GD NI P         +     +      F 
Sbjct: 121 KFPAKEKFYADLQQYLEKEHDKSNPILIMGDMNISPSDLDIGIGDENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+ +Q+L + G  D+ R  + T +  +S++DY +  +  N+G+RIDHI++S +    
Sbjct: 181 PEEREWYQRLYDYGLEDSFRKMNPTANDKFSWFDYRSKGFDDNRGLRIDHILVSQKLAER 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262
                I    R   KPSDH P+     
Sbjct: 241 CVDVGIALDIRAMEKPSDHAPIWAEFK 267


>gi|49082844|gb|AAT50822.1| PA2545 [synthetic construct]
          Length = 271

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 87/269 (32%), Positives = 129/269 (47%), Gaps = 11/269 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +RAR H LAA I+ + PD+I LQETK  D  FP   +++L YH+   GQK
Sbjct: 1   MKIVSFNINGLRARPHQLAALIERHQPDVIGLQETKVADDQFPQAEIEALGYHVHYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122
            + GVA+LS+  P+E+    P D  + Q RFI  TF       + + N Y P G      
Sbjct: 61  GHYGVALLSRQAPLELHRGFPSDGEESQRRFIWGTFSDAQGNPITVMNGYFPQGENREHP 120

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175
            K+  K  +            + E+ L+  GD NI P   D           +      F
Sbjct: 121 TKFPAKQRFYADLQSLLENSFKPEQALVVMGDINISPGDCDIGIGEENRKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKN--KGIRIDHIMLSPEA 232
             E R+    L+N G  D+ RA +   +  +S++DY +  +  N  +G+RID I+ S   
Sbjct: 181 LPEEREWLATLKNWGLVDSFRALNPEVNDRFSWFDYRSRGFEDNPKRGLRIDVILASRVL 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
                 A ID   RG  KPSDH P+ + L
Sbjct: 241 QPRFKDAGIDYDLRGMEKPSDHAPIWLEL 269


>gi|187924588|ref|YP_001896230.1| exodeoxyribonuclease III Xth [Burkholderia phytofirmans PsJN]
 gi|187715782|gb|ACD17006.1| exodeoxyribonuclease III Xth [Burkholderia phytofirmans PsJN]
          Length = 258

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 83/258 (32%), Positives = 131/258 (50%), Gaps = 1/258 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS++ R  ++  W++ +  D++CLQE K  D+ FP   L+   Y     GQK
Sbjct: 1   MKIATWNVNSLKVRQQHVIDWLETSGTDVLCLQELKLPDEKFPRAELEEKGYRSWFAGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGV IL +   + +       ++       +       + +RI + Y P+G    + K
Sbjct: 61  TYNGVGILVRGG-LTVDEGSIVRNIPGFEDPQQRVIAATIEGVRIISAYFPNGQAPGTDK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W+     + +  + L   L   GDYNI P   D ++P  WE     + E R +F
Sbjct: 120 FAYKLRWLAALHDWIASEMALHPKLALLGDYNIAPDDRDVHDPKAWEGQNLVSPEERAAF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            +L  +G  DA R       +YS+WDY   ++ +N G+RIDHI+LS     +  S  +D 
Sbjct: 180 VRLIELGLLDAFRQFEQPEKIYSWWDYRMMAFRRNAGLRIDHILLSKALADVCSSCDVDK 239

Query: 244 KPRGWTKPSDHTPVIVSL 261
            PR W +PSDH PV+  L
Sbjct: 240 VPRKWDQPSDHAPVVAQL 257


>gi|103487661|ref|YP_617222.1| exodeoxyribonuclease III (xth) [Sphingopyxis alaskensis RB2256]
 gi|98977738|gb|ABF53889.1| Exodeoxyribonuclease III [Sphingopyxis alaskensis RB2256]
          Length = 256

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 101/259 (38%), Positives = 152/259 (58%), Gaps = 5/259 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+N+N I+AR+  L  W++E  PD+ CLQE K+ D+  P + +++  Y     GQK
Sbjct: 1   MKIATFNINGIKARLPRLIEWLEERQPDVACLQELKSSDETMPTKEIEAAGYGFLYHGQK 60

Query: 64  SYNGVAILSKY-QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
            +NGVAIL+K   P+E+   L G+  D Q+R++EA        +R+ ++YLP+GNP    
Sbjct: 61  GFNGVAILAKGADPVEVQRGLAGEAEDEQSRYLEAD----AHGIRVASIYLPNGNPQPGP 116

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           K+D K+ W+ R    A   L  E P + AGDYN+IP   D ++P     DA    E R +
Sbjct: 117 KFDYKLRWMARLRERARMLLAAEIPTVLAGDYNVIPHDDDVWDPRAMATDALMQPESRDA 176

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           + +L   G+TDA+R+ H   H++++WDY A +W ++ G RIDH++LSP     L  A +D
Sbjct: 177 WFRLLGDGWTDALRSRHPAGHVWTYWDYQAGAWQRDHGFRIDHLLLSPALADRLVDAGVD 236

Query: 243 TKPRGWTKPSDHTPVIVSL 261
              RG  K SDH P  V L
Sbjct: 237 KDHRGREKASDHAPTWVVL 255


>gi|329847835|ref|ZP_08262863.1| exodeoxyribonuclease III [Asticcacaulis biprosthecum C19]
 gi|328842898|gb|EGF92467.1| exodeoxyribonuclease III [Asticcacaulis biprosthecum C19]
          Length = 258

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 109/261 (41%), Positives = 156/261 (59%), Gaps = 5/261 (1%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +  +AT+NVN +  R+  L  W+ E  PD++CLQE K  D+ FP + L++  Y     GQ
Sbjct: 1   MTKIATFNVNGVNGRLPVLLRWLAEARPDVVCLQELKAPDEKFPVKALEAAGYGAIWHGQ 60

Query: 63  KSYNGVAILSKY-QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           KS+NGVAIL+   +P+E    LPGD  D  +R+IEA        + IG LYLP+GNP   
Sbjct: 61  KSWNGVAILAHGAEPVETRRGLPGDPDDTHSRYIEAAVNG----VLIGGLYLPNGNPWPG 116

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            K++ K+ W +R    A++ L    P++ AGDYN++P   D Y P  W++DA F +EVR+
Sbjct: 117 KKFEYKLRWFERLKAHAAELLTTGAPVVLAGDYNVMPTDIDVYAPDRWQDDALFRIEVRE 176

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           ++  L   G+TDA+R  H    +++FWDY    W +N G+RIDH++LSP     L  A +
Sbjct: 177 AYAALMAQGWTDALRELHPGEQIFTFWDYLRARWPRNAGLRIDHLLLSPSMAPRLRQAEV 236

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
           D   RGW K SDH PV + LD
Sbjct: 237 DRHVRGWEKASDHAPVWIVLD 257


>gi|94495762|ref|ZP_01302342.1| exodeoxyribonuclease III [Sphingomonas sp. SKA58]
 gi|94425150|gb|EAT10171.1| exodeoxyribonuclease III [Sphingomonas sp. SKA58]
          Length = 262

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 103/259 (39%), Positives = 156/259 (60%), Gaps = 5/259 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+N+N I+AR+  L  W+ E  PD+ CLQE KT D+ FP + ++   Y     GQK
Sbjct: 5   MRIATFNINGIKARLPRLLEWLDETRPDVACLQEIKTSDETFPIKDIEDAGYGAIWHGQK 64

Query: 64  SYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
            +NGVAIL++   P+E+   L G+  D  +R++EA        +R+ ++YLP+GNP    
Sbjct: 65  GFNGVAILARGDAPVEVRRGLEGEPEDEHSRYLEADVKG----VRVASIYLPNGNPQPGP 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           K+D K+ W+ R  R A++    E P + AGDYN+IP+  D ++     +DA    E R +
Sbjct: 121 KFDYKLRWMDRLRRRAAEIWTEEVPAVLAGDYNVIPRDVDTFSVKAMADDALMQPESRAA 180

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           ++++ N G+TDAI + H    +++FWDY A+SW ++ G RIDH++LSP A   L  AR+D
Sbjct: 181 YRRMLNDGWTDAILSRHPAGGVWTFWDYQANSWPRDAGFRIDHLLLSPAAADRLIDARVD 240

Query: 243 TKPRGWTKPSDHTPVIVSL 261
              RG  K SDH P  V L
Sbjct: 241 RDFRGREKASDHAPTWVEL 259


>gi|294635923|ref|ZP_06714368.1| exodeoxyribonuclease III [Edwardsiella tarda ATCC 23685]
 gi|291090755|gb|EFE23316.1| exodeoxyribonuclease III [Edwardsiella tarda ATCC 23685]
          Length = 269

 Score =  207 bits (526), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 82/269 (30%), Positives = 124/269 (46%), Gaps = 8/269 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H LAA ++++NPD+I LQETK  D  FP + L  L YH+   GQK
Sbjct: 1   MKFISFNINGLRARPHQLAAIVEKHNPDVIGLQETKVHDDMFPLQDLAPLGYHLHYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122
            + GVA+L++  P+ +    PGD  D Q R I A        L + N Y P G       
Sbjct: 61  GHYGVALLTRMAPLAVRKGFPGDAEDAQRRIIMADIPTEQGVLTVINGYFPQGESRDHPL 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC------YNPIIWENDACFT 176
           K+  K  +      +  Q L  ++ ++  GD NI P   D           +      F 
Sbjct: 121 KFPAKSKFYADLQDYLQQSLTPQDQVLIMGDMNISPADIDIGIGDESRRRWLRSGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R    +L + G  D  R  H      +S++DY +  +  N+G+RID ++ S      
Sbjct: 181 PEERAWMDRLLSWGLVDTYRQAHPERDDRFSWFDYRSKGFDDNRGLRIDLLLASQPLAQR 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
              + ID + R   KPSDH P+     + 
Sbjct: 241 CVDSGIDYEIRAMEKPSDHAPIWAEFTLS 269


>gi|254777166|ref|ZP_05218682.1| exodeoxyribonuclease III [Mycobacterium avium subsp. avium ATCC
           25291]
          Length = 272

 Score =  206 bits (525), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 79/271 (29%), Positives = 126/271 (46%), Gaps = 7/271 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSIR+R+  +  W+   + D++ +QETK  D  FP      L Y +   G  
Sbjct: 1   MRLATWNVNSIRSRLPRVLDWLARTDVDVLAMQETKCADGQFPTLPFFELGYEVAHVGFN 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQAR-----FIEATFTINTQTLRIGNLYLPHGNP 118
            +NGVAI S+    ++     G                         +RI +LY+P+G  
Sbjct: 61  QWNGVAIASRVGLDDVRVGFEGQPSWSGKPEVAAAAEARALAATCAGVRIWSLYVPNGRA 120

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEE--PLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
           +    Y  K+ W+      A+  L  +    +  AGD+NI PQ  D ++  I+      +
Sbjct: 121 VGDPHYAYKLDWLAALRDSAAGWLREDPAAQIALAGDWNIAPQDDDVWSMEIFAGATHVS 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
              R++F  + +  F D +R       +Y++WDY A  + K +G+RID I+ SP     +
Sbjct: 181 EPERRAFNAILDAQFADLVRPFAPGPGVYTYWDYTALRFPKRQGMRIDFILGSPALARRV 240

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDIPEPR 267
             A+ID + R     SDH PV+V +   EP 
Sbjct: 241 THAQIDREERKGKGASDHAPVLVDVSRDEPP 271


>gi|297203458|ref|ZP_06920855.1| exodeoxyribonuclease III [Streptomyces sviceus ATCC 29083]
 gi|197716336|gb|EDY60370.1| exodeoxyribonuclease III [Streptomyces sviceus ATCC 29083]
          Length = 259

 Score =  206 bits (525), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 78/260 (30%), Positives = 123/260 (47%), Gaps = 1/260 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSI AR+  L AW++    D++CLQE K  +  FPF+ L+   Y        
Sbjct: 1   MRIATWNVNSITARLPRLLAWLESTGTDVLCLQEAKVAEAQFPFDQLREAGYEAAVHATG 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVA++S+    ++V  LPGD     A    A         R+ ++Y+P+G  +    
Sbjct: 61  RWNGVAVISRVGLDDVVKGLPGDPGYDGAPEPRAISATCGPA-RVWSVYVPNGREVDHPH 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W +      +       P    GDYN+ P   D Y+   +E     T   R + 
Sbjct: 120 YAYKLQWFEALKAAVAGDAAGSRPFAVLGDYNVAPTDDDVYDVAAFEGLTHVTPAERAAL 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             L+  G +D +       H +++WDY    + KN+G+RID +  +      +  A +D 
Sbjct: 180 ASLREAGLSDVVPRPLKYDHPFTYWDYRQLCFPKNRGMRIDLVYGNESFAKAVTDAYVDR 239

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
           + R     SDH PV+V LD+
Sbjct: 240 EERKGKGASDHAPVVVDLDV 259


>gi|319774993|ref|YP_004137481.1| exodeoxyribonuclease III [Haemophilus influenzae F3047]
 gi|329123105|ref|ZP_08251675.1| exodeoxyribonuclease III [Haemophilus aegyptius ATCC 11116]
 gi|317449584|emb|CBY85789.1| exodeoxyribonuclease III [Haemophilus influenzae F3047]
 gi|327471660|gb|EGF17102.1| exodeoxyribonuclease III [Haemophilus aegyptius ATCC 11116]
          Length = 267

 Score =  206 bits (525), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 82/267 (30%), Positives = 129/267 (48%), Gaps = 8/267 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A I++  PD+I LQE K  D+ FP+E  ++L YH+   GQK
Sbjct: 1   MKFISFNINGLRARPHQLEAIIEKYQPDVIGLQEIKVADEAFPYEITENLGYHVFHHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122
            + GVA+L+K +P  +    P D+ D Q R I A        L + N Y P G   T  T
Sbjct: 61  GHYGVALLTKQEPKVVRRGFPTDNEDAQKRIIMADLETEFGLLTVINGYFPQGESRTHET 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  +     ++  +  +   P++  GD NI P         +     +      F 
Sbjct: 121 KFPAKEKFYADLQQYLEKEHDKSNPILIMGDMNISPSDLDIGIGDENRKRWLSTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R  +Q+L + G  D+ R  + T +  +S++DY +  +  N+G+RIDHI++S +    
Sbjct: 181 PEERAWYQRLYDYGLEDSFRKLNPTANDKFSWFDYRSKGFDDNRGLRIDHILVSQKLAER 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262
                I    R   KPSDH P+     
Sbjct: 241 CVDVGIALDIRAMEKPSDHAPIWAEFK 267


>gi|121593606|ref|YP_985502.1| exodeoxyribonuclease III Xth [Acidovorax sp. JS42]
 gi|120605686|gb|ABM41426.1| exodeoxyribonuclease III Xth [Acidovorax sp. JS42]
          Length = 258

 Score =  206 bits (525), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 93/258 (36%), Positives = 141/258 (54%), Gaps = 1/258 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+NS+  R+  + AW++ N  D I LQE K  D+ FP +  ++  YH    GQK
Sbjct: 1   MQIATWNINSLSVRLPQVLAWLEANPVDAIGLQELKLVDEKFPHDAFEAAGYHAVCFGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAILS+    ++V ++PG   +       AT       LR+ N Y  +G    + K
Sbjct: 61  TYNGVAILSRTPLRDVVRNIPGHGDEQARVI-AATLDTPEGPLRLVNCYFVNGQAPGTEK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W++    +    L     L+  GD+N+ P+  D ++P+  ++    T+E RQ F
Sbjct: 120 FSYKLLWLEALRDWLRTELAAHPRLVLVGDFNVAPEDRDSFDPVGLKDTIHHTVEERQHF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q L  +G TDA R        YS+WDY    + KN+G+RIDHI++S      + + RID 
Sbjct: 180 QDLLGLGLTDAFRLFDQPEKSYSWWDYRMLGFQKNRGLRIDHILVSAALRPSVTACRIDR 239

Query: 244 KPRGWTKPSDHTPVIVSL 261
            PR   +PSDH PV+VSL
Sbjct: 240 APRKNPQPSDHAPVVVSL 257


>gi|83645532|ref|YP_433967.1| exonuclease III [Hahella chejuensis KCTC 2396]
 gi|83633575|gb|ABC29542.1| exodeoxyribonuclease III [Hahella chejuensis KCTC 2396]
          Length = 270

 Score =  206 bits (525), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 74/269 (27%), Positives = 117/269 (43%), Gaps = 9/269 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++NVN +R+R+H L   I +  PDII LQETK  D+ FP E +  + Y  E  GQK
Sbjct: 1   MRIVSFNVNGVRSRLHQLKELISQYQPDIIGLQETKVIDELFPLEAINEMGYQAEYYGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            + GVA+LSK   +       GD  +   R+I   + +  QTL + N Y P G   +   
Sbjct: 61  GHYGVALLSKQPALRCFKGFEGDGEEAHKRWIVGEYAVGGQTLVVCNGYFPQGENRSHPD 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACFTL 177
                           Q+   ++P++  GD N+     D           +      F  
Sbjct: 121 KFPNKQRFYAGTLDFLQQRSPDQPIVVMGDMNVSHTDSDIGIGEENRKRWLRTGKCSFLP 180

Query: 178 EVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKN--KGIRIDHIMLSPEATS 234
           E R+   +L + G  D  R         YS++DY +  +  N  +G+RID I+ +    +
Sbjct: 181 EEREWLNRLLDWGLVDTFRQHFPDVKDRYSWFDYRSRGFEDNPKRGLRIDLILATQPLAA 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
               A +  + R   K SDH P+    D+
Sbjct: 241 RCVDAGVSYEIRSMEKASDHCPIWADFDL 269


>gi|104781211|ref|YP_607709.1| exonuclease III [Pseudomonas entomophila L48]
 gi|95110198|emb|CAK14905.1| exonuclease III [Pseudomonas entomophila L48]
          Length = 270

 Score =  206 bits (525), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 84/269 (31%), Positives = 134/269 (49%), Gaps = 11/269 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +RAR H LAA I ++ PD+I LQETK  D  FP + +++L YH+   GQK
Sbjct: 1   MKIVSFNINGLRARPHQLAALIDKHQPDVIGLQETKVSDDQFPLKDVEALGYHVHYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122
            + GVA+LS+ +P+ +      D+ D Q RFI  TF   +   + + N Y P G      
Sbjct: 61  GHYGVALLSREKPLSLHKGFASDEEDAQRRFIWGTFADRDGTPVTVMNGYFPQGESRDHP 120

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175
            K+  K  +          + +  +P++  GD NI PQ        D     +      F
Sbjct: 121 TKFPAKQRFYSDLQALLEGQFQNGQPVLVMGDMNISPQDCDIGIGADNAKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232
             E R+  ++L+  G  D+ R  +      +S++DY +  +     +G+RID IM S   
Sbjct: 181 LPEEREWMERLKGWGLVDSFRHLNPEVADRFSWFDYRSRGFEDEPKRGLRIDLIMASQGL 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
              L +A +D + RG  KPSDH P+ + L
Sbjct: 241 LPRLKAAGVDYELRGMEKPSDHAPIWLEL 269


>gi|184199810|ref|YP_001854017.1| exodeoxyribonuclease III [Kocuria rhizophila DC2201]
 gi|183580040|dbj|BAG28511.1| exodeoxyribonuclease III [Kocuria rhizophila DC2201]
          Length = 268

 Score =  206 bits (525), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 74/268 (27%), Positives = 128/268 (47%), Gaps = 9/268 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSIRAR   + AW+  ++ D++ +QETK +D+NFP+E  +   Y +   G  
Sbjct: 1   MRIATWNVNSIRARADRIEAWLDRSDVDVLAIQETKAKDENFPWELFEFAGYEVAHFGVN 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDD----LDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            +NGVAI S+    ++    P          +              +R+ +LY+P+G  +
Sbjct: 61  QWNGVAIASRVGLTDVQRTFPDQPTFGKPGQEPAQEARAIGATCGGVRVWSLYVPNGRGL 120

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIF--AGDYNIIPQPHDCYNPIIWENDACFT- 176
                  K+ W++     A Q L+ +        GD+N+ PQ  D ++  +++       
Sbjct: 121 DDPHMPYKLEWLRVLEGHAKQWLQEDPDAQIALVGDWNVAPQDDDVWDIQLFKEGGYTHV 180

Query: 177 --LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
              E       +++ G+ D +R  H    +Y++WDY    + K +G+RID  + SP   +
Sbjct: 181 SEPERAAFHAFIEDAGYQDVVRPRHPGPGVYTYWDYKQLRFPKKEGMRIDFQLCSPALAA 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
            +  A ID   R     SDH PV++ +D
Sbjct: 241 RVQDAWIDRDERKGKGASDHAPVVIEID 268


>gi|50121263|ref|YP_050430.1| exonuclease III [Pectobacterium atrosepticum SCRI1043]
 gi|49611789|emb|CAG75238.1| exodeoxyribonuclease III [Pectobacterium atrosepticum SCRI1043]
          Length = 268

 Score =  206 bits (525), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 88/268 (32%), Positives = 128/268 (47%), Gaps = 8/268 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V ++N+N +RAR H LAA I+++ PD+I LQETK  D  FP E +    YH+   GQK
Sbjct: 1   MKVVSFNINGLRARPHQLAAIIEQHQPDVIGLQETKVHDDMFPLEDVSKYGYHVYYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122
            + GVA+L K +P+E+    P D+ D Q R I A F     TL + N Y P G       
Sbjct: 61  GHYGVALLCKEKPLEVRLGFPTDEEDAQRRIIMADFATEHGTLTVVNGYFPQGENRDHPV 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  + +    +  Q     +PLI  GD NI           +     +      F 
Sbjct: 121 KFPAKTRFYQDLQTYLEQHHSATQPLIVMGDVNISATDLDIGIGEESRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+   +LQ  G  D  RA +   +  +S++DY +  +  N+G+RID I+ S      
Sbjct: 181 PEEREWMARLQGWGLIDTFRAANPEGNDRFSWFDYRSSGFDDNRGLRIDLILASTFLAER 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             +  ID   RG  KPSDH P+     +
Sbjct: 241 CVATGIDYDIRGMEKPSDHAPIWAEFTL 268


>gi|319896463|ref|YP_004134656.1| exodeoxyribonuclease iii [Haemophilus influenzae F3031]
 gi|317431965|emb|CBY80313.1| exodeoxyribonuclease III [Haemophilus influenzae F3031]
          Length = 267

 Score =  206 bits (525), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 80/267 (29%), Positives = 127/267 (47%), Gaps = 8/267 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A I++  PD+I LQE K  D+ FP+E  ++L YH+   GQK
Sbjct: 1   MKFISFNINGLRARPHQLEAIIEKYQPDVIGLQEIKVADEAFPYEITENLGYHVFHHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122
            + GVA+L+K +P  +    P D+   Q R I A        L + N Y P G      T
Sbjct: 61  GHYGVALLTKQEPKVVRRGFPTDNEGAQKRIIMADLETEFGLLTVINGYFPQGESRAHET 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  +     ++  +  +   P++  GD NI P         +     +      F 
Sbjct: 121 KFPAKEKFYADLQQYLEKEHDKSNPILIMGDMNISPSDLDIGIGDENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R  +Q+L + G  D+ R  + T +  +S++DY +  +  N+G+RIDHI++S +    
Sbjct: 181 PEERAWYQRLYDYGLEDSFRKLNPTANDKFSWFDYRSKGFDDNRGLRIDHILVSRKLAER 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262
                I    R   KPSDH P+     
Sbjct: 241 CVDVGIALDIRAMEKPSDHAPIWAEFK 267


>gi|145629100|ref|ZP_01784899.1| exodeoxyribonuclease III [Haemophilus influenzae 22.1-21]
 gi|145639670|ref|ZP_01795273.1| exodeoxyribonuclease III [Haemophilus influenzae PittII]
 gi|144978603|gb|EDJ88326.1| exodeoxyribonuclease III [Haemophilus influenzae 22.1-21]
 gi|145271227|gb|EDK11141.1| exodeoxyribonuclease III [Haemophilus influenzae PittII]
 gi|309750640|gb|ADO80624.1| Exodeoxyribonuclease III [Haemophilus influenzae R2866]
          Length = 267

 Score =  206 bits (525), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 81/267 (30%), Positives = 128/267 (47%), Gaps = 8/267 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A I++  PD+I LQE K  D+ FP+E  ++L YH+   GQK
Sbjct: 1   MKFISFNINGLRARPHQLEAIIEKYQPDVIGLQEIKVADEAFPYEITENLGYHVFHHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122
            + GVA+L+K +P  +    P D+ D Q R I A        L + N Y P G      T
Sbjct: 61  GHYGVALLTKQKPKVVRRGFPTDNEDAQKRIIMADLETEFGLLTVINGYFPQGESRAHET 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  +     ++  +  +   P++  GD NI P         +     +      F 
Sbjct: 121 KFPAKEKFYADLQQYLEKEHDKSNPILIMGDMNISPSDLDIGIGDENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R  +Q+L + G  D+ R  + T +  +S++DY +  +  N+G+RIDHI++S +    
Sbjct: 181 PEERAWYQRLYDYGLEDSFRKLNPTANDKFSWFDYRSKGFDDNRGLRIDHILVSQKLAER 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262
                I    R   KPSDH P+     
Sbjct: 241 CVDVGIALDIRAMEKPSDHAPIWAEFK 267


>gi|330875089|gb|EGH09238.1| exonuclease III [Pseudomonas syringae pv. morsprunorum str.
           M302280PT]
          Length = 270

 Score =  206 bits (525), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 89/269 (33%), Positives = 135/269 (50%), Gaps = 11/269 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +RAR H LAA I ++ PD+I LQETK  D+ FP   +++L YH+   GQK
Sbjct: 1   MKIVSFNINGLRARPHQLAALIDKHQPDVIGLQETKVSDEQFPLADVEALGYHVHFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122
            + GVA+LS+  P+ +     GDD + Q RFI  T+   N Q + I N Y P G      
Sbjct: 61  GHYGVALLSRNPPLALHKGFEGDDEESQKRFIRGTYADSNGQPVTIMNGYFPQGESRDHP 120

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175
            K+  K  + +            ++PLI  GD NI PQ        D     +      F
Sbjct: 121 TKFPAKQRFYENLQALLEGHFSNDQPLIVMGDVNISPQDCDIGIGADNAKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232
             E R+  ++L+N G  D+ R  +      +S++DY +  +     +G+RID IM S   
Sbjct: 181 LPEEREWMERLKNWGLVDSFRYLYPEVSDRFSWFDYRSRGFEDEPKRGLRIDLIMTSTGL 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
              + +A +D   RG  KPSDH P+ + L
Sbjct: 241 QPRIKAAGVDYDLRGMEKPSDHAPIWLEL 269


>gi|319791365|ref|YP_004153005.1| exodeoxyribonuclease iii xth [Variovorax paradoxus EPS]
 gi|315593828|gb|ADU34894.1| exodeoxyribonuclease III Xth [Variovorax paradoxus EPS]
          Length = 263

 Score =  206 bits (525), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 107/265 (40%), Positives = 159/265 (60%), Gaps = 5/265 (1%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           M ++ +AT+NVN I +R+  L  W+ E+ PD+ CLQE K+ D   P + ++   Y I   
Sbjct: 1   MPLMKIATFNVNGINSRLARLLEWLDESKPDVACLQELKSPDAALPVDAIRGAGYGIVAH 60

Query: 61  GQKSYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
           GQ+++NGVAIL++  +PI+    LPG + D Q+R+IEA        + +G LYLP+GNP 
Sbjct: 61  GQRAWNGVAILARGREPIDTGRGLPGMEADTQSRYIEAVVGG----VLVGCLYLPNGNPQ 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K+D K+ W + F R A +      P++ AGDYN++P   D YNP  W +DA    E 
Sbjct: 117 PGPKFDYKLQWFEAFNRHAKKLFSSGMPVVLAGDYNVVPTDADIYNPASWRDDALLQPES 176

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R +F +L   G+TDAIRATH     ++FW Y+ + + ++ G+RIDH++L+ E   +L SA
Sbjct: 177 RAAFAQLLKQGWTDAIRATHPDRVPFTFWTYWRNRYPRDAGLRIDHLLLNAELAPMLRSA 236

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIP 264
            +D   RG T  SDH P  + LDI 
Sbjct: 237 GVDRDVRGRTGASDHAPAWIELDIS 261


>gi|158338364|ref|YP_001519541.1| exodeoxyribonuclease III [Acaryochloris marina MBIC11017]
 gi|158308605|gb|ABW30222.1| exodeoxyribonuclease III [Acaryochloris marina MBIC11017]
          Length = 268

 Score =  206 bits (525), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 88/264 (33%), Positives = 139/264 (52%), Gaps = 5/264 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A+WNVNSIR R+ ++  W+   + D++CLQETK  D++FP  + +   Y +   GQK
Sbjct: 1   MKIASWNVNSIRTRLEHVLDWLYTQSIDVLCLQETKVIDEDFPKASFEEEGYQVYVSGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL----RIGNLYLPHGNPI 119
           +YNGVA++S+    E+ +           +  +    + T  +    RI NLY+P+G+ I
Sbjct: 61  AYNGVALISRTTLSEVSSGFTPLLGPDLTQHYDQQKRLITGIISPGVRILNLYVPNGSEI 120

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLI-FAGDYNIIPQPHDCYNPIIWENDACFTLE 178
            S KY  K+ W++    +  + L  +   +   GD+NI     D ++P   E     T  
Sbjct: 121 DSDKYVYKLEWLELLHHYVEKLLSQDPQHLLICGDFNIALDDRDMHDPSKREAHIMSTDR 180

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
            RQ+ QK+  +G  D  R  +     +S+W+Y A S+ +NKG RIDH  L+P       +
Sbjct: 181 ERQALQKVLALGLEDVFRKFNSKSEQFSWWNYRAGSFQRNKGWRIDHHYLTPTLYEQATA 240

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
             ID  PR   KPSDH PV+V +D
Sbjct: 241 CTIDAAPRRLPKPSDHAPVVVEID 264


>gi|148825679|ref|YP_001290432.1| exonuclease III [Haemophilus influenzae PittEE]
 gi|148715839|gb|ABQ98049.1| exodeoxyribonuclease III [Haemophilus influenzae PittEE]
          Length = 267

 Score =  206 bits (525), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 81/267 (30%), Positives = 128/267 (47%), Gaps = 8/267 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A I++  PD+I LQE K  D+ FP+E  ++L YH+   GQK
Sbjct: 1   MKFISFNINGLRARPHQLEAIIEKYQPDVIGLQEIKVADEAFPYEITENLGYHVFHHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122
            + GVA+L+K +P  +      D+ D Q R I A        L + N Y P G   T  T
Sbjct: 61  GHYGVALLTKQEPKAVRRGFSTDNEDAQKRIIMADLETEFGLLTVINGYFPQGESRTHET 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  +     ++  +  +   P++  GD NI P         +     +      F 
Sbjct: 121 KFPAKEKFYADLQQYLEKEHDKSNPILIMGDMNISPSDLDIGIGDENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R  +Q+L + G  D+ R  + T +  +S++DY +  +  N+G+RIDHI++S +    
Sbjct: 181 PEERAWYQRLYDYGLEDSFRKLNPTANDKFSWFDYRSKGFDDNRGLRIDHILVSQKLAER 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262
                I    R   KPSDH P+     
Sbjct: 241 CVDVGIALDIRAMEKPSDHAPIWAEFK 267


>gi|227111460|ref|ZP_03825116.1| exonuclease III [Pectobacterium carotovorum subsp. brasiliensis
           PBR1692]
          Length = 268

 Score =  206 bits (525), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 90/268 (33%), Positives = 128/268 (47%), Gaps = 8/268 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V ++N+N +RAR H LAA I+++ PD+I LQETK  D  FP E +    YH+   GQK
Sbjct: 1   MKVVSFNINGLRARPHQLAAIIEQHQPDVIGLQETKVHDDMFPLEDVSQYGYHVYYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122
            + GVA+L K QPI +    P D+ D Q R I A F     TL + N Y P G       
Sbjct: 61  GHYGVALLCKTQPIAVRRGFPTDEDDAQRRIIMADFATEHGTLTVVNGYFPQGESRDHPV 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  + +    +  Q     +PLI  GD NI P         +     +      F 
Sbjct: 121 KFPAKTRFYQDLQTYLEQHHSATQPLIVMGDVNISPTDLDIGIGEENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+   +LQ  G  D  RA +   +  +S++DY +  +  N+G+RID I+ S      
Sbjct: 181 PEEREWMARLQRWGLIDTFRAANPDSNDRFSWFDYRSAGFDDNRGLRIDLILASTFLAER 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             +  ID   RG  KPSDH P+     +
Sbjct: 241 CVATGIDYDIRGMEKPSDHAPIWAQFSL 268


>gi|145633402|ref|ZP_01789132.1| exodeoxyribonuclease III [Haemophilus influenzae 3655]
 gi|145635225|ref|ZP_01790929.1| exodeoxyribonuclease III [Haemophilus influenzae PittAA]
 gi|229845387|ref|ZP_04465518.1| exonuclease III [Haemophilus influenzae 6P18H1]
 gi|229846960|ref|ZP_04467066.1| exonuclease III [Haemophilus influenzae 7P49H1]
 gi|144985965|gb|EDJ92567.1| exodeoxyribonuclease III [Haemophilus influenzae 3655]
 gi|145267504|gb|EDK07504.1| exodeoxyribonuclease III [Haemophilus influenzae PittAA]
 gi|229810044|gb|EEP45764.1| exonuclease III [Haemophilus influenzae 7P49H1]
 gi|229811695|gb|EEP47393.1| exonuclease III [Haemophilus influenzae 6P18H1]
 gi|309972825|gb|ADO96026.1| Exodeoxyribonuclease III [Haemophilus influenzae R2846]
          Length = 267

 Score =  206 bits (525), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 81/267 (30%), Positives = 128/267 (47%), Gaps = 8/267 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A I++  PD+I LQE K  D+ FP+E  ++L YH+   GQK
Sbjct: 1   MKFISFNINGLRARPHQLEAIIEKYQPDVIGLQEIKVADEAFPYEITENLGYHVFHHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122
            + GVA+L+K +P  +    P D+ D Q R I A        L + N Y P G      T
Sbjct: 61  GHYGVALLTKQEPKVVRRGFPTDNEDAQKRIIMADLETEFGLLTVINGYFPQGESRAHET 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  +     ++  +  +   P++  GD NI P         +     +      F 
Sbjct: 121 KFPAKEKFYADLQQYLEKEHDKSNPILIMGDMNISPSDLDIGIGDENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R  +Q+L + G  D+ R  + T +  +S++DY +  +  N+G+RIDHI++S +    
Sbjct: 181 PEERAWYQRLYDYGLEDSFRKLNPTANDKFSWFDYRSKGFDDNRGLRIDHILVSQKLAER 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262
                I    R   KPSDH P+     
Sbjct: 241 CVDVGIALDIRAMEKPSDHAPIWAEFK 267


>gi|254251949|ref|ZP_04945267.1| Exonuclease III [Burkholderia dolosa AUO158]
 gi|124894558|gb|EAY68438.1| Exonuclease III [Burkholderia dolosa AUO158]
          Length = 281

 Score =  206 bits (525), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 82/257 (31%), Positives = 137/257 (53%), Gaps = 1/257 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+  R  ++  W+ ++  D++CLQE K  D+ +P   L+++ Y     GQK
Sbjct: 24  MKIATWNVNSLNVRKQHVLDWLAQSGADVLCLQELKLPDEKYPRADLEAVGYRSWFTGQK 83

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAIL++   + +       ++       +    +  + +RI + Y P+G  + S K
Sbjct: 84  TYNGVAILARNT-LTVDESDVVRNIPGFDDPQQRVVAVTVEGVRIVSAYFPNGQAVDSDK 142

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W+     + +  ++    L   GD+NI P+  D ++P  WE     + + R  F
Sbjct: 143 FVYKMQWLDALHAWLAAEMQRYPKLALLGDFNIAPEDRDVHDPAKWEGQNLVSPQERAHF 202

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            KL  +GF DA R        +++WDY   ++ +N G+RIDHI+LSP       S  +D 
Sbjct: 203 AKLIELGFVDAFRRFEQPEKTFTWWDYRMFAFRRNAGLRIDHILLSPALADTCTSCVVDR 262

Query: 244 KPRGWTKPSDHTPVIVS 260
            PR W +PSDHTPV+ +
Sbjct: 263 APRTWEQPSDHTPVVAT 279


>gi|330965345|gb|EGH65605.1| exonuclease III [Pseudomonas syringae pv. actinidiae str. M302091]
          Length = 270

 Score =  206 bits (525), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 89/269 (33%), Positives = 135/269 (50%), Gaps = 11/269 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +RAR H LAA I ++ PD+I LQETK  D+ FP   +++L YH+   GQK
Sbjct: 1   MKIVSFNINGLRARPHQLAALIDKHQPDVIGLQETKVSDEQFPLADVEALGYHVHFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122
            + GVA+LS+  P+ +     GDD + Q RFI  T+   N Q + I N Y P G      
Sbjct: 61  GHYGVALLSRSPPLALHKGFEGDDEESQKRFIRGTYADSNGQPVTIMNGYFPQGESRDHP 120

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175
            K+  K  + +            ++PLI  GD NI PQ        D     +      F
Sbjct: 121 TKFPAKQRFYENLQALLEGHFSNDQPLIVMGDVNISPQDCDIGIGADNAKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232
             E R+  ++L+N G  D+ R  +      +S++DY +  +     +G+RID IM S   
Sbjct: 181 LPEEREWMERLKNWGLVDSFRYLYPEVSDRFSWFDYRSRGFEDEPKRGLRIDLIMTSTGL 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
              + +A +D   RG  KPSDH P+ + L
Sbjct: 241 QPRIKAAGVDYDLRGMEKPSDHAPIWLEL 269


>gi|148827197|ref|YP_001291950.1| exonuclease III [Haemophilus influenzae PittGG]
 gi|148718439|gb|ABQ99566.1| exodeoxyribonuclease III [Haemophilus influenzae PittGG]
          Length = 267

 Score =  206 bits (525), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 81/267 (30%), Positives = 128/267 (47%), Gaps = 8/267 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A I++  PD+I LQE K  D+ FP+E  ++L YH+   GQK
Sbjct: 1   MKFISFNINGLRARPHQLEAIIEKYQPDVIGLQEIKVADEAFPYEITENLGYHVFHHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122
            + GVA+L+K +P  +    P D+ D Q R I A        L + N Y P G      T
Sbjct: 61  GHYGVALLTKQEPKVVRRGFPTDNEDAQKRIIMADLETEFGLLTVINGYFPQGESRAHET 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  +     ++  +  +   P++  GD NI P         +     +      F 
Sbjct: 121 KFPAKEKFYADLQQYLEKEHDKSNPILIMGDMNISPSDLDIGIGDENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R  +Q+L + G  D+ R  + T +  +S++DY +  +  N+G+RIDHI++S +    
Sbjct: 181 PEERAWYQRLYDYGLEDSFRNLNPTANDKFSWFDYRSKGFDDNRGLRIDHILVSQKLAER 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262
                I    R   KPSDH P+     
Sbjct: 241 CVDVGIALDIRAMEKPSDHAPIWAEFK 267


>gi|317506931|ref|ZP_07964703.1| exodeoxyribonuclease III [Segniliparus rugosus ATCC BAA-974]
 gi|316254859|gb|EFV14157.1| exodeoxyribonuclease III [Segniliparus rugosus ATCC BAA-974]
          Length = 267

 Score =  206 bits (525), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 76/265 (28%), Positives = 126/265 (47%), Gaps = 7/265 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+NSIRAR+    +W++ +  D++ LQETK  D  FP E  +   Y +   G  
Sbjct: 1   MRIATWNINSIRARVDRAVSWLERSQVDVLALQETKCADAQFPEEPFREAGYAVAHTGNG 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIE-----ATFTINTQTLRIGNLYLPHGNP 118
            +NGVAI+S+    ++     G     +    E              +RI +LY+P+G  
Sbjct: 61  QWNGVAIVSRLGLADVQVGFDGQPGFHKDPEAEALPEPRAIAATCGGVRIWSLYVPNGRD 120

Query: 119 ITSTKYDDKISWIKRFLRFASQRL--ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
           +    Y  K+ W+      A   L  + +  +   GD+NI P   D ++P  ++     +
Sbjct: 121 LADRHYGYKLEWLAALRGQAEGWLAADADAKIALTGDWNIAPFDEDVWDPSFFDGKTHTS 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
              R +F   +  GFTD  R       +Y++WDY    + + +G+RID ++ SP   + +
Sbjct: 181 GPERDAFFAFEKSGFTDVARPHTPGPGVYTYWDYTQLRFPRREGMRIDFVLGSPALAASV 240

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSL 261
             A +D + R     SDH PV+V L
Sbjct: 241 TGASVDREERKGKGASDHAPVVVEL 265


>gi|222110327|ref|YP_002552591.1| exodeoxyribonuclease iii xth [Acidovorax ebreus TPSY]
 gi|221729771|gb|ACM32591.1| exodeoxyribonuclease III Xth [Acidovorax ebreus TPSY]
          Length = 258

 Score =  206 bits (525), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 93/258 (36%), Positives = 141/258 (54%), Gaps = 1/258 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+NS+  R+  + AW++ N  D I LQE K  D+ FP +  ++  YH    GQK
Sbjct: 1   MQIATWNINSLSVRLPQVLAWLEANPVDAIGLQELKLVDEKFPHDAFEAAGYHAVCFGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAILS+    ++V ++PG   +       AT       LR+ N Y  +G    + K
Sbjct: 61  TYNGVAILSRTPLRDVVRNIPGHGDEQARVI-AATLDTPEGPLRLVNCYFVNGQAPGTEK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W++    +    L     L+  GD+N+ P+  D ++P+  ++    T+E RQ F
Sbjct: 120 FSYKLLWLEALRDWLRTELAAHPRLVLVGDFNVAPEDRDSFDPVGLKDTIHHTVEERQHF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q L  +G TDA R        YS+WDY    + KN+G+RIDHI++S      + + RID 
Sbjct: 180 QDLLGLGLTDAFRLFDQPEKSYSWWDYRMLGFQKNRGLRIDHILVSTALRPSVTACRIDR 239

Query: 244 KPRGWTKPSDHTPVIVSL 261
            PR   +PSDH PV+VSL
Sbjct: 240 APRKNPQPSDHAPVVVSL 257


>gi|15597741|ref|NP_251235.1| exonuclease III [Pseudomonas aeruginosa PAO1]
 gi|218891476|ref|YP_002440343.1| exonuclease III [Pseudomonas aeruginosa LESB58]
 gi|9948603|gb|AAG05933.1|AE004682_5 exodeoxyribonuclease III [Pseudomonas aeruginosa PAO1]
 gi|218771702|emb|CAW27476.1| exodeoxyribonuclease III [Pseudomonas aeruginosa LESB58]
          Length = 270

 Score =  206 bits (524), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 88/269 (32%), Positives = 131/269 (48%), Gaps = 11/269 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +RAR H LAA I+ + PD+I LQETK  D  FP   +++L YH+   GQK
Sbjct: 1   MKIVSFNINGLRARPHQLAALIERHQPDVIGLQETKVADDQFPQAEIEALGYHVHYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122
            + GVA+LS+  P+E+    P D  + Q RFI  TF       + + N Y P G      
Sbjct: 61  GHYGVALLSRQAPLELHRGFPSDGEESQRRFIWGTFSDAQGNPITVMNGYFPQGENREHP 120

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175
            K+  K  +            + E+ L+  GD NI P+  D           +      F
Sbjct: 121 TKFPAKQRFYADLQSLLENSFKPEQALVVMGDINISPEDCDIGIGEENRKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKN--KGIRIDHIMLSPEA 232
             E R+    L+N G  D+ RA +   +  +S++DY +  +  N  +G+RID I+ S   
Sbjct: 181 LPEEREWLATLKNWGLVDSFRALNPEVNDRFSWFDYRSRGFEDNPKRGLRIDVILASRVL 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
            S    A ID   RG  KPSDH P+ + L
Sbjct: 241 QSRFKDAGIDYDLRGMEKPSDHAPIWLEL 269


>gi|84516350|ref|ZP_01003710.1| exodeoxyribonuclease III [Loktanella vestfoldensis SKA53]
 gi|84510046|gb|EAQ06503.1| exodeoxyribonuclease III [Loktanella vestfoldensis SKA53]
          Length = 259

 Score =  206 bits (524), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 119/258 (46%), Positives = 162/258 (62%), Gaps = 1/258 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+N+N ++ARI  L  W+ ++ PD+  LQE K+ D  FP + ++   Y +ET GQK
Sbjct: 1   MKIATFNINGVKARIETLCDWLDDSAPDVAILQEIKSVDDGFPRQLIEDRGYTLETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVAILSK    ++   LPGDD D QAR+IEAT  +    +RI  LYLP+GNP    K
Sbjct: 61  GFNGVAILSKLPLEDVTRGLPGDDADEQARWIEAT-VVGDVAVRICGLYLPNGNPAPGPK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +D K++W++R L  A+  L  E P + AGDYNIIPQ  D   P +W +DA F  E R ++
Sbjct: 120 FDYKLAWMERLLARATALLADEMPALMAGDYNIIPQGMDAARPQVWRDDALFRPESRAAY 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           +++ N+GFT+A R        YSFWDY A +W KN GIRIDH +L+P+   LL  A I+ 
Sbjct: 180 RRILNLGFTEAFRTLEPGAGHYSFWDYQAGAWEKNNGIRIDHFLLTPQCADLLAGAWIEK 239

Query: 244 KPRGWTKPSDHTPVIVSL 261
             R   KPSDH PV V L
Sbjct: 240 DLRARDKPSDHVPVWVEL 257


>gi|90417808|ref|ZP_01225720.1| exodeoxyribonuclease III [Aurantimonas manganoxydans SI85-9A1]
 gi|90337480|gb|EAS51131.1| exodeoxyribonuclease III [Aurantimonas manganoxydans SI85-9A1]
          Length = 276

 Score =  206 bits (524), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 107/259 (41%), Positives = 159/259 (61%), Gaps = 5/259 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A++N+N +  R+  L  W+ E  PD +CLQE K+ D+ FP + ++   Y     GQK
Sbjct: 1   MKIASFNINGVNGRLPVLLRWLAEAEPDAVCLQELKSPDEKFPIDAIREAGYGAIWHGQK 60

Query: 64  SYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           S+NGVAIL++   P+E    LPGDD D Q+R++EA        + IG LYLP+GNP    
Sbjct: 61  SWNGVAILARGTDPLETRRGLPGDDDDHQSRYLEAAVKG----VLIGCLYLPNGNPAPGP 116

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           K+D K+ W+ RF   A+  +    P++ AGDYN+IP   D Y P  W +DA F  EVR++
Sbjct: 117 KFDYKLRWLGRFANHAADLMATGAPVVLAGDYNVIPTELDVYKPEHWVDDALFRPEVREA 176

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F +L + G+TDAIR+ H    +Y+FWDY  ++W ++ G+R+DH++LSP     L +A + 
Sbjct: 177 FHRLLDAGWTDAIRSLHPEASIYTFWDYLRNAWGRDAGLRLDHLLLSPTLAPRLLAAGVH 236

Query: 243 TKPRGWTKPSDHTPVIVSL 261
              RGW K SDH PV + +
Sbjct: 237 RDVRGWEKASDHAPVWIEI 255


>gi|311112410|ref|YP_003983632.1| exodeoxyribonuclease III [Rothia dentocariosa ATCC 17931]
 gi|310943904|gb|ADP40198.1| exodeoxyribonuclease III [Rothia dentocariosa ATCC 17931]
          Length = 335

 Score =  206 bits (524), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 75/265 (28%), Positives = 123/265 (46%), Gaps = 7/265 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSIRAR   +  W+ +   D++ LQETKT+D+ FPFE  + L Y +   G  
Sbjct: 69  MKIATWNVNSIRARADRIEDWLDKTEVDVLALQETKTKDETFPFELFEFLGYEVAHYGLN 128

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLD----VQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            +NGVAI S+     +    P           A             +RI +LY+P+G  +
Sbjct: 129 QWNGVAIASRVGLDSVERTFPNQPAFGKPGDPAEIEARAIGATCNGVRIWSLYVPNGRGL 188

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEE--PLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
           T      K+ W+++     +  L  +        GD+N+ P+  D ++   +  +    +
Sbjct: 189 TDPHMAYKMEWMRQLRTNVNGWLHADPAAQFALVGDWNVAPEDTDVWDIDFFRENDLTHV 248

Query: 178 EVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
              +       +     +          Y++WDY A  +SKN+G+RID  + SP   + +
Sbjct: 249 SAPEREAFYALLNDEGLVDPVRPYTQGEYTYWDYQAGRFSKNEGMRIDFQLCSPALAARV 308

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSL 261
            +A ID + R     SDHTPV++ L
Sbjct: 309 ENAWIDREEREGDGASDHTPVVIEL 333


>gi|290512900|ref|ZP_06552264.1| exodeoxyribonuclease III [Klebsiella sp. 1_1_55]
 gi|289774513|gb|EFD82517.1| exodeoxyribonuclease III [Klebsiella sp. 1_1_55]
          Length = 301

 Score =  206 bits (524), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 81/268 (30%), Positives = 125/268 (46%), Gaps = 8/268 (2%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + +   ++N+N +RAR H LAA ++++ PD+I LQETK  D  FP E +  L Y++   G
Sbjct: 32  ATMKFVSFNINGLRARPHQLAAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHG 91

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           QK + GVA+L+K  PI +    P D  + Q R I A        + + N Y P G     
Sbjct: 92  QKGHYGVALLTKDTPIAVRRGFPDDGEEAQRRIIMAEIPSPFGNVTVINGYFPQGESRDH 151

Query: 122 -TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDAC 174
            TK+  K ++ +    +    L  E P++  GD NI P         +     +      
Sbjct: 152 ETKFPAKAAFYQNLQNYLETELNKENPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCS 211

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
           F  E R+   +L   G  D  R  +      +S++DY +  +  N+G+RID ++ S    
Sbjct: 212 FLPEEREWMDRLLGWGLVDTWRQANPDNQEHFSWFDYRSKGFDDNRGLRIDLLLASQPLA 271

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSL 261
                  ID + RG  KPSDH PV  + 
Sbjct: 272 QRCVETGIDYEIRGMEKPSDHAPVWATF 299


>gi|302382037|ref|YP_003817860.1| exodeoxyribonuclease III Xth [Brevundimonas subvibrioides ATCC
           15264]
 gi|302192665|gb|ADL00237.1| exodeoxyribonuclease III Xth [Brevundimonas subvibrioides ATCC
           15264]
          Length = 257

 Score =  206 bits (524), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 91/258 (35%), Positives = 139/258 (53%), Gaps = 3/258 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+N+N I +R+ NL  W+    PD+ CLQE K     FP   ++   YH    G+ 
Sbjct: 1   MRIATFNINGINSRLPNLLEWLAGTQPDVACLQELKAPQDRFPEGAIEEAGYHAAWVGEA 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVAILS++ P  +           +              + +G LYLP+GNP    K
Sbjct: 61  RWNGVAILSRHGPPVVTRRAL---PGDRKDVQSRYLEAAVNGVLVGCLYLPNGNPQPGPK 117

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +D K++W +R +  A    + E P++ AGDYN++P   D Y+   W+ +A    E R +F
Sbjct: 118 FDYKLAWFERLIAHAGTLFDTEAPVVLAGDYNVVPTEADIYDSRSWKKNALLQPESRAAF 177

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            ++ + G+TDA+R       +Y+FWDY  D WS+N G+RIDH++L+P+A   L  A +D 
Sbjct: 178 ARMLDDGWTDALRERFPHEAVYTFWDYLRDGWSRNAGLRIDHLLLNPQAAGRLVDAGVDA 237

Query: 244 KPRGWTKPSDHTPVIVSL 261
             RG  K SDH P  + L
Sbjct: 238 GVRGREKASDHAPAWIEL 255


>gi|28869934|ref|NP_792553.1| exodeoxyribonuclease III [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|28853179|gb|AAO56248.1| exodeoxyribonuclease III [Pseudomonas syringae pv. tomato str.
           DC3000]
          Length = 270

 Score =  206 bits (524), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 90/269 (33%), Positives = 135/269 (50%), Gaps = 11/269 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +RAR H LAA I ++ PD+I LQETK  D+ FP   +++L YH+   GQK
Sbjct: 1   MKIVSFNINGLRARPHQLAALIDKHQPDVIGLQETKVSDEQFPLADVEALGYHVHFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122
            + GVA+LS+  P+ +     GDD + Q RFI  T+   N Q + I N Y P G      
Sbjct: 61  GHYGVALLSRNPPLALHKGFEGDDEESQKRFIRGTYADSNGQPVTIMNGYFPQGESRDHP 120

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175
            K+  K  + +            E+PLI  GD NI PQ        D     +      F
Sbjct: 121 TKFPAKQRFYENLQALLEGHFSNEQPLIVMGDVNISPQDCDIGIGADNAKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232
             E R+  ++L+N G  D+ R  +      +S++DY +  +     +G+RID IM S   
Sbjct: 181 LPEEREWMERLKNWGLVDSFRYLYPEVSDRFSWFDYRSRGFEDEPKRGLRIDLIMTSTGL 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
              + +A +D   RG  KPSDH P+ + L
Sbjct: 241 QPRIRAAGVDYDLRGMEKPSDHAPIWLEL 269


>gi|56460559|ref|YP_155840.1| exonuclease III [Idiomarina loihiensis L2TR]
 gi|56179569|gb|AAV82291.1| Exonuclease III [Idiomarina loihiensis L2TR]
          Length = 269

 Score =  206 bits (524), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 84/268 (31%), Positives = 132/268 (49%), Gaps = 9/268 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N IRAR+H L A I ++ PD+I LQETK  D  FP + ++++ YH+   GQK
Sbjct: 1   MKIISFNINGIRARLHQLQAVIDKHQPDVIGLQETKVHDDQFPLKDVEAMGYHVIYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI-NTQTLRIGNLYLPHGNPITST 122
            + GVA+LSK          P DD + Q R I   + + +   +RI N Y P G      
Sbjct: 61  GHYGVAMLSKKPLENPQFGFPTDDDEAQRRMIMGDYPLADGGHVRILNGYFPQGESRDHP 120

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175
            K+  K  + +  + +    L  E+P+I  GD NI           +     +      F
Sbjct: 121 TKFPAKEKFYQDLMSYLDNDLSPEQPVIVMGDVNISRIDLDIGIGENNAKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R+  Q+L + GFTD  R  +    + +S++DY +  +  N+G+RID I+ +     
Sbjct: 181 LPEEREWIQRLMDWGFTDTYRQLNPDVDNQFSWFDYRSRGFDDNRGLRIDLILATKALAK 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
               + ID + RG  KPSDH PV  +  
Sbjct: 241 QCEDSGIDYELRGIEKPSDHAPVWSTFK 268


>gi|182678385|ref|YP_001832531.1| exodeoxyribonuclease III [Beijerinckia indica subsp. indica ATCC
           9039]
 gi|182634268|gb|ACB95042.1| exodeoxyribonuclease III [Beijerinckia indica subsp. indica ATCC
           9039]
          Length = 258

 Score =  206 bits (524), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 127/258 (49%), Positives = 165/258 (63%), Gaps = 1/258 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+NSIR R  +L  ++ E  PDI+CLQE K  D  FPF  +++  YH    GQK
Sbjct: 1   MQIATWNINSIRQRTEHLLRYLDEVAPDIVCLQELKCTDDAFPFAAIEAKGYHAAVHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVAILSK   IE+   LPGD  D  AR++E         LRI +LYLP+GNP  + K
Sbjct: 61  GFNGVAILSKQP-IEVKCGLPGDSTDEHARYVEGVIDSEIGRLRIVSLYLPNGNPPDTDK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K++W+ R +  AS  L+ EE L+ AGDYN+IP P DCY+P +W  DA F    R  F
Sbjct: 120 YTYKLAWMDRLIAHASTLLQCEELLVLAGDYNVIPMPGDCYDPAVWATDALFLPPTRARF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + L N+GFT+A+RA  D   LY+FWDY A +W +NKGI IDH++LSP+A   L    ID 
Sbjct: 180 RSLLNLGFTNALRAVSDEPGLYTFWDYQAGAWQRNKGICIDHLLLSPQAVDHLQHVVIDK 239

Query: 244 KPRGWTKPSDHTPVIVSL 261
           + RG  KPSDH PV V+L
Sbjct: 240 ERRGEDKPSDHVPVRVTL 257


>gi|182435048|ref|YP_001822767.1| putative exonuclease [Streptomyces griseus subsp. griseus NBRC
           13350]
 gi|178463564|dbj|BAG18084.1| putative exonuclease [Streptomyces griseus subsp. griseus NBRC
           13350]
          Length = 259

 Score =  206 bits (524), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 77/260 (29%), Positives = 127/260 (48%), Gaps = 1/260 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+NVNSI AR+  L AW++ +  D++C+QETK   + FP E L+   Y        
Sbjct: 1   MRIATYNVNSITARLPRLLAWLESSGTDVLCVQETKCTAEQFPAEALREAGYASAVNATG 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVA+LS+    ++VT LP        +   A        LR+ ++Y+P+G  +    
Sbjct: 61  RWNGVALLSRVGLSDVVTGLPDGPEYEGVQEPRAISATCGP-LRLWSVYVPNGREVEHAH 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W++   +  +       P    GD+N+ P   D ++P ++E     T   R + 
Sbjct: 120 YAYKLRWLEALRKAVAADAAKALPFAVLGDFNVAPTDEDVWDPALFEGATHVTPAERAAL 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             L+  G ++           Y+FWDY    + KNKG+RID    +   T+ +  + +D 
Sbjct: 180 AALEAEGLSEVHPRPLKYDRAYTFWDYRELRFPKNKGMRIDLTFGNAPFTAAVKDSYVDR 239

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
           + R     SDH PV+V LD+
Sbjct: 240 EERKGKGASDHAPVVVDLDL 259


>gi|331673295|ref|ZP_08374063.1| exodeoxyribonuclease III [Escherichia coli TA280]
 gi|331069493|gb|EGI40880.1| exodeoxyribonuclease III [Escherichia coli TA280]
          Length = 272

 Score =  206 bits (524), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 79/268 (29%), Positives = 125/268 (46%), Gaps = 8/268 (2%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + +   ++N+N +RAR H L A ++++ PD+I LQETK  D  FP E +  L Y++   G
Sbjct: 3   ATMKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHG 62

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           QK + GVA+L+K  PI +    PGDD + Q R I A        + + N Y P G     
Sbjct: 63  QKGHYGVALLTKETPITVRRGFPGDDEEAQRRIIMAEIPSTLGNVTVINGYFPQGESRDH 122

Query: 122 TK-YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDAC 174
              +  K  + +    +    L+ E P++  GD NI P         +     +      
Sbjct: 123 PIKFPAKAQFYQNLQNYLETELKRENPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCS 182

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
           F  E R+  ++L + G  D  R  +      +S++DY +  +  N+G+RID ++ S    
Sbjct: 183 FLPEEREWMERLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLA 242

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSL 261
                  ID + R   KPSDH PV  + 
Sbjct: 243 ECCVETGIDYEIRSMEKPSDHAPVWATF 270


>gi|271500687|ref|YP_003333712.1| exodeoxyribonuclease III [Dickeya dadantii Ech586]
 gi|270344242|gb|ACZ77007.1| exodeoxyribonuclease III [Dickeya dadantii Ech586]
          Length = 268

 Score =  206 bits (524), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 87/268 (32%), Positives = 132/268 (49%), Gaps = 8/268 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H LAA I+++ PD+I LQETK  D  FP + ++   YH+   GQK
Sbjct: 1   MKFVSFNINGLRARPHQLAAVIEQHQPDVIGLQETKVHDDMFPLDDVKQFGYHVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122
            + GVA+L+K +P+ +    P DD D Q R I A       TL + N Y P G       
Sbjct: 61  GHYGVALLTKAEPLAVRRGFPTDDEDAQRRIIMADLATPLGTLTVVNGYFPQGESRDHPV 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  + +    +  Q  + ++P++  GD NI P         D     +      F 
Sbjct: 121 KFPAKTRFYQDLQHYLEQHHQADQPVLIMGDMNISPTDLDIGIGEDNRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+  ++L+N G  D  RA +      +S++DY +  +  N+G+RID IM +    S 
Sbjct: 181 PEEREWMERLKNWGLVDTFRAANPECQDKFSWFDYRSSGFDDNRGLRIDLIMATSPLASR 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             +  ID   RG  KPSDH PV     +
Sbjct: 241 CTATGIDYAIRGMEKPSDHAPVWAEFTL 268


>gi|94969020|ref|YP_591068.1| exodeoxyribonuclease III (xth) [Candidatus Koribacter versatilis
           Ellin345]
 gi|94551070|gb|ABF40994.1| exodeoxyribonuclease III (xth) [Candidatus Koribacter versatilis
           Ellin345]
          Length = 260

 Score =  206 bits (524), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 108/257 (42%), Positives = 157/257 (61%), Gaps = 7/257 (2%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSY 65
           +A+WNVNSIRAR+  ++ WI +N+PD++ +QE K  +  FP E   +L Y      QK+Y
Sbjct: 9   IASWNVNSIRARLGIVSDWIAKNHPDVLLMQELKATE--FPAEAFHALGYQAAAVTQKAY 66

Query: 66  NGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYD 125
           NGVA+LS+     + T L GD+ D  AR++E         LR+ N+Y P+GNPI + K+ 
Sbjct: 67  NGVAVLSRLPVETVRTALRGDEADSHARYLETRIDG----LRVVNIYAPNGNPIGTEKFS 122

Query: 126 DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQK 185
            K++W+ R ++     L+ + P + AGDYNIIP+  DC+ P  W  DA F  E R+ ++ 
Sbjct: 123 YKLAWLDRLIQEMQSWLKDDIPTVVAGDYNIIPEDIDCHKPSSWIRDALFQPEPRERYRA 182

Query: 186 LQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK 244
           L  MG+TDA R  H      ++FWDY+  ++  N+GIRIDH +LSP     L    IDT+
Sbjct: 183 LLAMGYTDAFRTLHPGETGQFTFWDYFRKAFETNRGIRIDHFLLSPSLKPRLAKCHIDTE 242

Query: 245 PRGWTKPSDHTPVIVSL 261
           PR   KPSDHTP+++ L
Sbjct: 243 PRKLEKPSDHTPIVLEL 259


>gi|330960959|gb|EGH61219.1| exonuclease III [Pseudomonas syringae pv. maculicola str. ES4326]
          Length = 270

 Score =  206 bits (523), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 92/269 (34%), Positives = 138/269 (51%), Gaps = 11/269 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +RAR H LAA I+++ PD+I LQETK  D+ FP   +++L YH+   GQK
Sbjct: 1   MKIVSFNINGLRARPHQLAALIEKHQPDVIGLQETKVSDEQFPHADIEALGYHVHFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122
            + GVA+LS+  P+E+     GD+ D Q RFI   +   N Q + I N Y P G      
Sbjct: 61  GHYGVALLSRNPPLELHKGFEGDNEDAQKRFIRGAYADSNGQPIIIMNGYFPQGESRDHP 120

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175
            K+  K  + +   +    R   E+PLI  GD NI PQ        D     +      F
Sbjct: 121 TKFPAKQRFYEDLQQLLESRFSNEQPLIVMGDVNISPQDCDIGIGADNAKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232
             E R+  ++L+N G  D+ R  H      +S++DY +  +     +G+RID IM S   
Sbjct: 181 LPEEREWMERLKNWGMVDSFRYLHPEVSDRFSWFDYRSRGFEDEPKRGLRIDLIMTSTGL 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
              + +A +D   RG  KPSDH P+ + L
Sbjct: 241 QPRIKAAGVDYDLRGMEKPSDHAPIWLEL 269


>gi|167034007|ref|YP_001669238.1| exodeoxyribonuclease III Xth [Pseudomonas putida GB-1]
 gi|166860495|gb|ABY98902.1| exodeoxyribonuclease III Xth [Pseudomonas putida GB-1]
          Length = 265

 Score =  206 bits (523), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 100/262 (38%), Positives = 152/262 (58%), Gaps = 5/262 (1%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           M  + +AT+N+N IR+R+  L AW++   PDI CLQE K  ++ FP E +++  Y     
Sbjct: 1   MKALKIATFNINGIRSRLPALLAWLEREQPDIACLQELKAANQQFPREAIEAAGYGCLYQ 60

Query: 61  GQKSYNGVAILSKY-QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
           GQ S+NGVAIL++  +P+E+   LPG   D Q+R++EA        + +G LYLP+GNP 
Sbjct: 61  GQPSWNGVAILARDSEPLEVRRGLPGMQDDQQSRYLEAAV----HGVLVGCLYLPNGNPQ 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K+D K+ W +  ++ A        P + AGD+N++P   D Y+P  W  DA    E 
Sbjct: 117 PGPKFDYKLRWFECLIKHAQTLHVSRHPTVLAGDFNVVPTDLDIYSPRSWLKDALLQPES 176

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R  F+ L   G+ DA+R  +    +Y+FWDY+ + W++N G+RIDH++L+P  +  L  A
Sbjct: 177 RACFEALLAQGWVDAVRHLYPEQRIYTFWDYFRNHWARNAGLRIDHLLLNPGLSPYLKGA 236

Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261
            +D   R   K SDH PV + L
Sbjct: 237 GVDAWVRNEAKASDHAPVWIQL 258


>gi|187478127|ref|YP_786151.1| exodeoxyribonuclease III [Bordetella avium 197N]
 gi|115422713|emb|CAJ49240.1| exodeoxyribonuclease III [Bordetella avium 197N]
          Length = 261

 Score =  206 bits (523), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 94/261 (36%), Positives = 134/261 (51%), Gaps = 1/261 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS++ R+  +  W+  N  D +CLQE K  D  FP E    + YH    GQK
Sbjct: 1   MQLATWNVNSLKVRLPQVIDWLNANPVDALCLQELKLADDKFPLEAFTEIGYHAAWAGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAILS+     +  ++PG +   Q      T       +R+ + Y P+G  + S K
Sbjct: 61  TYNGVAILSREPGFALTRNIPGYEDPQQRVI-AVTLPSPAGDVRVISAYCPNGQSLDSDK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W      +  + L     L   GDYN+ P   D +NP  WE     +   RQ+F
Sbjct: 120 YPYKLEWFGALRHWLEEELRTYPRLAILGDYNVAPADEDVHNPEKWEGQVLVSAPERQAF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q L ++G TDA R        +S+WDY    + +N G+RIDHI+LS        +  ID 
Sbjct: 180 QALLDLGLTDAFRLFAQPEKSFSWWDYRMFGFRRNAGLRIDHILLSDALKPTCVACIIDK 239

Query: 244 KPRGWTKPSDHTPVIVSLDIP 264
            PRG  +PSDHTPV+ +L + 
Sbjct: 240 GPRGNEQPSDHTPVVTTLKLS 260


>gi|330824047|ref|YP_004387350.1| exodeoxyribonuclease III Xth [Alicycliphilus denitrificans K601]
 gi|329309419|gb|AEB83834.1| exodeoxyribonuclease III Xth [Alicycliphilus denitrificans K601]
          Length = 258

 Score =  206 bits (523), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 92/258 (35%), Positives = 143/258 (55%), Gaps = 1/258 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+NS+  R+  + AW+  N  D I LQE K  D+ FP +  ++  YH    GQK
Sbjct: 1   MHLATWNINSLSVRLPQVLAWLVANPVDAIGLQELKLVDEKFPHDAFEAAGYHAVCFGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAI+S+  P ++V ++PG D +       AT  +    LR+ N Y  +G    + K
Sbjct: 61  TYNGVAIVSRTPPRDVVRNIPGHDDEQARVI-AATLDVEGGPLRLVNCYFVNGQAPGTDK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W+     +    L     L+  GD+N+ P+  D Y+P+  ++    T+E RQ F
Sbjct: 120 FAYKLQWLAALHDWLRAELAAHPRLVLVGDFNVAPEDRDSYDPVGLKDTIHHTVEERQHF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           ++L  +G TDA R        YS+WDY    + KN+G+RIDHI++S    + + + RID 
Sbjct: 180 RQLLELGLTDAFRMFEQPEKSYSWWDYRQLGFQKNRGLRIDHILVSEALRAGVTACRIDR 239

Query: 244 KPRGWTKPSDHTPVIVSL 261
            PR   +PSDH PV+ +L
Sbjct: 240 APRKNPQPSDHAPVVATL 257


>gi|161524301|ref|YP_001579313.1| exodeoxyribonuclease III Xth [Burkholderia multivorans ATCC 17616]
 gi|221214798|ref|ZP_03587767.1| exodeoxyribonuclease III [Burkholderia multivorans CGD1]
 gi|160341730|gb|ABX14816.1| exodeoxyribonuclease III Xth [Burkholderia multivorans ATCC 17616]
 gi|221165337|gb|EED97814.1| exodeoxyribonuclease III [Burkholderia multivorans CGD1]
          Length = 272

 Score =  206 bits (523), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 84/256 (32%), Positives = 133/256 (51%), Gaps = 1/256 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+  R  ++  W+ ++  D++CLQE K  D+ FP   L++  Y     GQK
Sbjct: 15  MKIATWNVNSLNVRKQHVLDWLAQSAVDVLCLQELKLPDEKFPRADLEAAGYRSWFAGQK 74

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAIL++       + +  +    +         +    +RI + Y P+G  + S K
Sbjct: 75  TYNGVAILARDTLPFDESDVVRNIPGFEDTQQRV-IAVTIDGVRIVSAYFPNGQAVGSDK 133

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W+     +    ++    L   GDYNI P+  D ++P  WE +   + + R  F
Sbjct: 134 FLYKMQWLDALHAWLRTEMQRYPKLALLGDYNIAPEDRDVHDPAKWEGENLVSPQERAHF 193

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            KL  +GF DA R        +++WDY   ++ +N G+RIDHI+LSP       S  +D 
Sbjct: 194 AKLIELGFVDAFRRFEQPEKTFTWWDYRMFAFRRNAGLRIDHILLSPALAGSCTSCEVDR 253

Query: 244 KPRGWTKPSDHTPVIV 259
            PR W +PSDHTPV+ 
Sbjct: 254 VPRTWEQPSDHTPVVA 269


>gi|308050255|ref|YP_003913821.1| exodeoxyribonuclease III [Ferrimonas balearica DSM 9799]
 gi|307632445|gb|ADN76747.1| Exodeoxyribonuclease III [Ferrimonas balearica DSM 9799]
          Length = 268

 Score =  206 bits (523), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 80/267 (29%), Positives = 131/267 (49%), Gaps = 9/267 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR+H L A I ++ PD+I LQETK +D  FP E ++++ YH+   GQK
Sbjct: 1   MKFVSFNINGLRARLHQLQALIDKHQPDVIGLQETKVDDPQFPLEAVEAMGYHVAFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHL-PGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121
            + GVA+L+K  P+ +       ++   +   +      N Q + + N Y P G      
Sbjct: 61  GHYGVAMLTKQVPLAVQKGFATDEEDAQRRMIMVTVADANGQPVHVLNGYFPQGENRDHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175
           TK+  K  +    +   +   + +E ++  GD NI P               +      F
Sbjct: 121 TKFPAKRRFYADLMSHLNTHRQADEQVVVMGDINISPTDLDIGIGEPNAKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHL-YSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R+    L N G TD+ R  +      YS++DY +  +  N+G+RID I+ S   T+
Sbjct: 181 LPEEREWLATLLNWGLTDSFRHLNPEEAQTYSWFDYRSRGFDDNRGLRIDVILTSAPLTA 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261
            L SA +D + RG  KPSDH P+  ++
Sbjct: 241 RLDSAGVDYELRGIEKPSDHAPIWTTI 267


>gi|290956326|ref|YP_003487508.1| exonuclease [Streptomyces scabiei 87.22]
 gi|260645852|emb|CBG68943.1| putative exonuclease [Streptomyces scabiei 87.22]
          Length = 259

 Score =  206 bits (523), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 75/260 (28%), Positives = 124/260 (47%), Gaps = 1/260 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSI AR+  L AW++ +  D++CLQE K  +  FP + L+   Y        
Sbjct: 1   MRIATWNVNSITARLPRLLAWLESSGTDVLCLQEAKIAEDGFPLDALREAGYEAAVHATG 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVA++S+    ++V  LPGD     +    A        +R+ ++Y+P+G  +    
Sbjct: 61  RWNGVAVISRVGIEDVVKGLPGDPGYDGSVEPRAISATCGP-VRVWSVYVPNGREVDHPH 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W +      +       P    GDYN+ P   D Y+   +E     T   R + 
Sbjct: 120 YAYKLQWFEALKAAVAGDAAGSRPFAVMGDYNVAPTDDDVYDVAAFEGLTHVTPAERAAL 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             L+  G TD +       H +++WDY    + KN+G+RID +  +      +  + +D 
Sbjct: 180 ASLREAGLTDVVPRPLKYEHPFTYWDYRQLCFPKNRGMRIDLVYGNETFAKAVTDSYVDR 239

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
           + R     SDH PV+V L++
Sbjct: 240 EERKGKGASDHAPVVVDLEV 259


>gi|209542628|ref|YP_002274857.1| exodeoxyribonuclease III Xth [Gluconacetobacter diazotrophicus PAl
           5]
 gi|209530305|gb|ACI50242.1| exodeoxyribonuclease III Xth [Gluconacetobacter diazotrophicus PAl
           5]
          Length = 258

 Score =  206 bits (523), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 98/259 (37%), Positives = 138/259 (53%), Gaps = 3/259 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A+WNVNS+R R  ++  W++   PD++ LQE K ED  FP E  ++  Y     GQK
Sbjct: 1   MKIASWNVNSVRQRQAHVLDWLEREKPDLLGLQEIKCEDAAFPAEAFRAAGYDCVVVGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           SYNGVAILS+                           I    L  GNLYLP+GN   S  
Sbjct: 61  SYNGVAILSRLPFSVTAR---ALPFLDGEALQARYVEIEAGGLTFGNLYLPNGNSGGSAG 117

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y+ K+++++     A   LE     + AGDYN+ P   DC    +   DA    E R +F
Sbjct: 118 YEAKLAFMEALALHARALLEAGRDFVLAGDYNVCPTDEDCAPGALPPTDALVRPESRAAF 177

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           ++L  +G TDA+RA H     Y+FWDY A +W ++ G+RIDH +LSP     L SA+ D 
Sbjct: 178 RRLIWLGLTDALRALHPHGRYYTFWDYQAGAWPRDCGLRIDHALLSPRIAERLDSAQPDR 237

Query: 244 KPRGWTKPSDHTPVIVSLD 262
             RG  +PSDH P++++LD
Sbjct: 238 DERGRAQPSDHVPLVITLD 256


>gi|300898982|ref|ZP_07117271.1| exodeoxyribonuclease III [Escherichia coli MS 198-1]
 gi|300357379|gb|EFJ73249.1| exodeoxyribonuclease III [Escherichia coli MS 198-1]
          Length = 272

 Score =  206 bits (523), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 79/268 (29%), Positives = 125/268 (46%), Gaps = 8/268 (2%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + +   ++N+N +RAR H L A ++++ PD+I LQETK  D  FP E +  L Y++   G
Sbjct: 3   ATMKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHG 62

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           QK + GVA+L+K  PI +    PGDD + Q R I A        + + N Y P G     
Sbjct: 63  QKGHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSTLGNVTVINGYFPQGESRDH 122

Query: 122 TK-YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDAC 174
              +  K  + +    +    L+ E P++  GD NI P         +     +      
Sbjct: 123 PIKFPAKAQFYQNLQNYLETELKRENPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCS 182

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
           F  E R+  ++L + G  D  R  +      +S++DY +  +  N+G+RID ++ S    
Sbjct: 183 FLPEEREWMERLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLA 242

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSL 261
                  ID + R   KPSDH PV  + 
Sbjct: 243 ECCVETGIDYEIRSMEKPSDHAPVWATF 270


>gi|117623921|ref|YP_852834.1| exonuclease III [Escherichia coli APEC O1]
 gi|237705700|ref|ZP_04536181.1| exonuclease III [Escherichia sp. 3_2_53FAA]
 gi|301026483|ref|ZP_07189913.1| exodeoxyribonuclease III [Escherichia coli MS 69-1]
 gi|91072540|gb|ABE07421.1| exodeoxyribonuclease III [Escherichia coli UTI89]
 gi|115513045|gb|ABJ01120.1| exodeoxyribonuclease III [Escherichia coli APEC O1]
 gi|226900457|gb|EEH86716.1| exonuclease III [Escherichia sp. 3_2_53FAA]
 gi|300395501|gb|EFJ79039.1| exodeoxyribonuclease III [Escherichia coli MS 69-1]
 gi|315286456|gb|EFU45891.1| exodeoxyribonuclease III [Escherichia coli MS 110-3]
 gi|315299863|gb|EFU59103.1| exodeoxyribonuclease III [Escherichia coli MS 16-3]
          Length = 272

 Score =  206 bits (523), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 79/268 (29%), Positives = 125/268 (46%), Gaps = 8/268 (2%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + +   ++N+N +RAR H L A ++++ PD+I LQETK  D  FP E +  L Y++   G
Sbjct: 3   ATMKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHG 62

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           QK + GVA+L+K  PI +    PGDD + Q R I A        + + N Y P G     
Sbjct: 63  QKGHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSPLGNVTVINGYFPQGESRDH 122

Query: 122 TK-YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDAC 174
              +  K  + +    +    L+ E P++  GD NI P         +     +      
Sbjct: 123 PIKFPAKAQFYQNLQNYLETELKRENPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCS 182

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
           F  E R+  ++L + G  D  R  +      +S++DY +  +  N+G+RID ++ S    
Sbjct: 183 FLPEEREWMERLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLA 242

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSL 261
                  ID + R   KPSDH PV  + 
Sbjct: 243 ECCVETGIDYEIRSMEKPSDHAPVWATF 270


>gi|145641817|ref|ZP_01797392.1| exodeoxyribonuclease III [Haemophilus influenzae R3021]
 gi|145273439|gb|EDK13310.1| exodeoxyribonuclease III [Haemophilus influenzae 22.4-21]
          Length = 267

 Score =  206 bits (523), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 83/267 (31%), Positives = 128/267 (47%), Gaps = 8/267 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A I++  PD+I LQE K  D+ FP+E  ++L YH+   GQK
Sbjct: 1   MKFISFNINGLRARPHQLEAIIEKYQPDVIGLQEIKVADEAFPYEITENLGYHVFHHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122
            + GVA+L+K +P  I    P D+ D Q R I A        L I N Y P G      T
Sbjct: 61  GHYGVALLTKQEPKVIRRGFPTDNEDAQKRIIMADLETEFGLLTIINGYFPQGESRAHET 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  +     ++  +  +   P++  GD NI P         +     +      F 
Sbjct: 121 KFPAKEKFYADLQQYLEKEHDKSNPILIMGDMNISPSDLDIGIGDENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R  +Q+L + G  D+ R  + T +  +S++DY +  +  N+G+RIDHI++S +    
Sbjct: 181 PEERAWYQRLYDYGLEDSFRKLNPTANDKFSWFDYRSKGFDDNRGLRIDHILVSQKLAER 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262
                I    R   KPSDH P+     
Sbjct: 241 CVDVGIALDIRAMEKPSDHAPIWAEFK 267


>gi|251773491|gb|EES54039.1| Exodeoxyribonuclease III [Leptospirillum ferrodiazotrophum]
          Length = 259

 Score =  206 bits (523), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 91/259 (35%), Positives = 134/259 (51%), Gaps = 5/259 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + VATWNVNS+  R+  +  WI   +PDI+CLQETK  D  FP E  +   Y +   GQ 
Sbjct: 1   MRVATWNVNSLPVRLPQVLDWIDRKSPDILCLQETKVPDSRFPAEPFRERGYDLLFRGQP 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAILS+    + +   PG+                   LR+ NLY+P+G  + + K
Sbjct: 61  TYNGVAILSRRPLSDPLRDFPGEPDPECRLLAAT-----AGPLRLFNLYVPNGQDLDTPK 115

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K++W+ R              L+  GD+NI+P+  D Y+P+        +   R++ 
Sbjct: 116 YRYKLAWLDRLAALLDDERRRHPFLVLTGDFNIVPEDRDAYDPVALRGQIFLSPPEREAL 175

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            ++ N+GF DA RA H     +S+WDY    + +N G+RID I+++      L SA ID 
Sbjct: 176 ARIMNLGFRDAFRALHPDPGHFSWWDYRQGMFRRNMGLRIDLILMASSLEPALTSAEIDR 235

Query: 244 KPRGWTKPSDHTPVIVSLD 262
           + R   +PSDH PV V  D
Sbjct: 236 EVRKNERPSDHAPVFVDFD 254


>gi|95930349|ref|ZP_01313086.1| exodeoxyribonuclease III [Desulfuromonas acetoxidans DSM 684]
 gi|95133601|gb|EAT15263.1| exodeoxyribonuclease III [Desulfuromonas acetoxidans DSM 684]
          Length = 270

 Score =  206 bits (523), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 77/270 (28%), Positives = 124/270 (45%), Gaps = 10/270 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++NVN +RAR H + A I    PD++ LQETK  D  FP   ++SL Y +   GQK
Sbjct: 1   MKIISFNVNGLRARHHQVKAVIDTYQPDVLALQETKVHDDQFPLAEVESLGYEVRYYGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122
            + GVA+LS+  P+++      DD + Q R I   +    Q + + N Y P G   +   
Sbjct: 61  GHYGVALLSRQAPVDVQYGFVDDDDEAQRRLIVGRYAFGDQMVTVVNGYFPQGENRSHAV 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW------ENDACFT 176
           K+  K  + +   +         + L+  GD N+ P   D             +  +CF 
Sbjct: 121 KFPAKEKFYRDLRQMLENYEAKNDALLVVGDMNVAPLAEDIGIGPDNEKRWLAQGKSCFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKN--KGIRIDHIMLSPEAT 233
            E R   Q + + G  D+ R  +      +S++DY +  + ++  +G+RID I+ S    
Sbjct: 181 PEERAWLQSVMDWGLHDSFRHCYPDVDDRFSWFDYRSRGFERDPKRGLRIDLILASQALI 240

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           S    A ID   R   KPSDH P+     +
Sbjct: 241 SRCQDAGIDYDIRAMEKPSDHCPIWAEFSL 270


>gi|331647243|ref|ZP_08348337.1| exodeoxyribonuclease III [Escherichia coli M605]
 gi|331044026|gb|EGI16162.1| exodeoxyribonuclease III [Escherichia coli M605]
          Length = 272

 Score =  206 bits (523), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 79/268 (29%), Positives = 125/268 (46%), Gaps = 8/268 (2%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + +   ++N+N +RAR H L A ++++ PD+I LQETK  D  FP E +  L Y++   G
Sbjct: 3   ATMKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHG 62

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           QK + GVA+L+K  PI +    PGDD + Q R I A        + + N Y P G     
Sbjct: 63  QKGHYGVALLTKETPISVRRGFPGDDEEAQRRIIMAEIPSPLGNITVINGYFPQGESRDH 122

Query: 122 TK-YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDAC 174
              +  K  + +    +    L+ E P++  GD NI P         +     +      
Sbjct: 123 PIKFPAKAQFYQNLQNYLETELKRENPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCS 182

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
           F  E R+  ++L + G  D  R  +      +S++DY +  +  N+G+RID ++ S    
Sbjct: 183 FLPEEREWMERLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLA 242

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSL 261
                  ID + R   KPSDH PV  + 
Sbjct: 243 ECCVETGIDYEIRSMEKPSDHAPVWATF 270


>gi|311279891|ref|YP_003942122.1| exodeoxyribonuclease III [Enterobacter cloacae SCF1]
 gi|308749086|gb|ADO48838.1| exodeoxyribonuclease III [Enterobacter cloacae SCF1]
          Length = 268

 Score =  206 bits (523), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 81/267 (30%), Positives = 123/267 (46%), Gaps = 8/267 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A ++++ PD+I LQETK  D  FP E +  L Y++   GQK
Sbjct: 1   MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEDVAKLGYNVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122
            + GVA+L+K  P+ +    PGD  D Q R I A        + + N Y P G       
Sbjct: 61  GHYGVALLTKATPVSVRRGFPGDGEDAQRRIIMAEIPSAFGNVTVINGYFPQGESRDHPL 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  + +    + +  L  E P++  GD NI P         D     +      F 
Sbjct: 121 KFPAKELFYQNLQNYLNTELNNENPVLIMGDMNISPTDLDIGIGDDNRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+   +L + G  D  R  H      +S++DY +  +  N+G+RID ++ S      
Sbjct: 181 PEEREWMARLLDWGLVDTFRHAHPDTQDKFSWFDYRSKGFDDNRGLRIDLLLASSPLAQR 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262
                ID + R   KPSDH PV  +  
Sbjct: 241 CVETGIDYEIRSMEKPSDHAPVWATFK 267


>gi|149278560|ref|ZP_01884696.1| exodeoxyribonuclease III (exonuclease III) [Pedobacter sp. BAL39]
 gi|149230555|gb|EDM35938.1| exodeoxyribonuclease III (exonuclease III) [Pedobacter sp. BAL39]
          Length = 260

 Score =  206 bits (523), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 96/261 (36%), Positives = 144/261 (55%), Gaps = 3/261 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+N+N +  R+  L  W+ +  PD++CLQE K E   FP   +    Y     G+K
Sbjct: 1   MKIATYNINGVNGRLPVLLRWLAKAQPDVVCLQELKCESYRFPVTAINDAGYQAIWRGEK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           S+NGVAILSK +  E+ T LPG+D   Q           T  + IG +YLP+GNP    K
Sbjct: 61  SWNGVAILSKSEIRELRTDLPGEDASYQHS---RYIEGFTFGMVIGCIYLPNGNPYPGPK 117

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +D K+ W  R        L    P++  GDYN++P   D Y P  + ++A F  E R+++
Sbjct: 118 FDYKLRWFSRLADHGRTLLNTGLPVMLVGDYNVMPTELDTYKPEKYLDNALFREESRKAY 177

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             L   G+ DAIR  +    +Y+FWDY  +++ +N G+R+DH +L+P     L  A++D 
Sbjct: 178 ADLVAQGWIDAIRELYPGERIYTFWDYMRNAYGRNAGLRLDHFLLNPVLAGRLKVAKVDK 237

Query: 244 KPRGWTKPSDHTPVIVSLDIP 264
           + RGW K SDH PV + L +P
Sbjct: 238 EVRGWEKASDHAPVWIELSMP 258


>gi|237731238|ref|ZP_04561719.1| exonuclease III [Citrobacter sp. 30_2]
 gi|226906777|gb|EEH92695.1| exonuclease III [Citrobacter sp. 30_2]
          Length = 272

 Score =  206 bits (523), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 81/270 (30%), Positives = 129/270 (47%), Gaps = 8/270 (2%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + +   ++N+N +RAR H LAA ++++ PD+I LQETK  D  FP E +  L Y++   G
Sbjct: 3   ATMKFVSFNINGLRARPHQLAAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHG 62

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           QK + GVA+L+K  PI +    PGDD + Q R I A       ++ + N Y P G     
Sbjct: 63  QKGHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSPLGSITVINGYFPQGESRDH 122

Query: 122 -TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDAC 174
            TK+  K ++ +    +    L+ + P++  GD NI P         +     +      
Sbjct: 123 ETKFPAKAAFYQNLQNYLETELKRDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCS 182

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
           F  E R+  ++L   G  D  R  +      +S++DY +  +  N+G+RID ++ S    
Sbjct: 183 FLPEEREWMERLLGWGLVDTYRHANPEKNDQFSWFDYRSKGFDDNRGLRIDLLLASNPLA 242

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                  ID + R   KPSDH PV     +
Sbjct: 243 ERCEETGIDYEIRSMEKPSDHAPVWAKFRV 272


>gi|261210504|ref|ZP_05924797.1| exodeoxyribonuclease III [Vibrio sp. RC341]
 gi|260840289|gb|EEX66860.1| exodeoxyribonuclease III [Vibrio sp. RC341]
          Length = 268

 Score =  206 bits (523), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 77/268 (28%), Positives = 127/268 (47%), Gaps = 9/268 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +RAR+H L A I ++ PD+I LQE K  D  FP E ++++ Y +   GQK
Sbjct: 1   MKIISFNINGLRARLHQLQAIIDKHQPDVIGLQEIKVHDDAFPREEVEAMGYQVYFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121
           ++ GVAIL K  P+E++   P  ++   +   +            + N Y P G+ +   
Sbjct: 61  AHYGVAILCKQTPLEVIKGFPTDNEEHQKRMIMATFADQEGNKTTVLNGYFPQGDNVEHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175
           TK+  K  + +  + +  +     E L+  GD NI P               +      F
Sbjct: 121 TKFPYKRQFYRDLMTYLREHRSNTERLVVMGDINISPIDLDIGIGEANRKRWLQTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R+  Q L + G  D  R  H   +  +S++DY +  +  N+G+RID I+ +P    
Sbjct: 181 QPEEREWLQTLLDWGLVDTFRQLHPNVNDQFSWFDYRSRGFEDNRGLRIDVILATPSLAE 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
               A ID + RG  KPSDH P+  +  
Sbjct: 241 TCQEAGIDYELRGIDKPSDHAPIWATFK 268


>gi|87123786|ref|ZP_01079636.1| Exodeoxyribonuclease III xth [Synechococcus sp. RS9917]
 gi|86168355|gb|EAQ69612.1| Exodeoxyribonuclease III xth [Synechococcus sp. RS9917]
          Length = 276

 Score =  206 bits (523), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 85/278 (30%), Positives = 138/278 (49%), Gaps = 5/278 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A+WNVNS+R R+ ++  W+    PD++CLQETK  D  FP E   S  +     GQK
Sbjct: 1   MRIASWNVNSLRTRLDHVLNWLNAAQPDLLCLQETKVADPQFPLEAFTSRGWQATVHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT---QTLRIGNLYLPHGNPIT 120
           +YNGVA++S+    ++     G+  D +A  +     + +     +R+ NLY+P+G+ + 
Sbjct: 61  AYNGVALVSRTPLEDVRLGFSGELADEEAEELGTQKRVISALLDGVRVVNLYVPNGSSLK 120

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             KY  K+ W+    R+  +  E  EPL   GD+NI  +  D ++P         +   R
Sbjct: 121 LEKYPYKLRWLACLQRYLQRPQERGEPLCVVGDFNIALESRDMHDPDRLTGGIMASEPER 180

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            + +        D  R        +S+WDY + +W +++G RIDHI L  E  +      
Sbjct: 181 AALKAALGDTLHDVFRVFEPDTGHWSWWDYRSGAWDRDRGWRIDHIYLCDELLARARGCL 240

Query: 241 IDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278
           I  + RG  +PSDH PV+  L  P   ++  DS   N+
Sbjct: 241 IHKQERGRDQPSDHAPVVADLCWP--PEEDGDSDEWNL 276


>gi|324007120|gb|EGB76339.1| exodeoxyribonuclease III [Escherichia coli MS 57-2]
          Length = 272

 Score =  205 bits (522), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 78/268 (29%), Positives = 124/268 (46%), Gaps = 8/268 (2%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + +   ++N+N +RAR H L A ++++ PD+I LQETK  D  FP E +  L Y++   G
Sbjct: 3   ATMKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVTKLGYNVFYHG 62

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           QK + GVA+L+K  PI +    PGD  + Q R I A        + + N Y P G     
Sbjct: 63  QKGHYGVALLTKETPIAVRRGFPGDGEEAQRRIIMAEIPSPLGNITVINGYFPQGESRDH 122

Query: 122 TK-YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDAC 174
              +  K  + +    +    L+ E P++  GD NI P         +     +      
Sbjct: 123 PIKFPAKAQFYQNLQNYLETELKRENPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCS 182

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
           F  E R+  ++L + G  D  R  +      +S++DY +  +  N+G+RID ++ S    
Sbjct: 183 FLPEEREWMERLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLA 242

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSL 261
                  ID + R   KPSDH PV  + 
Sbjct: 243 ECCVETGIDYEIRSMEKPSDHAPVWATF 270


>gi|16272016|ref|NP_438214.1| exonuclease III [Haemophilus influenzae Rd KW20]
 gi|145636755|ref|ZP_01792421.1| exodeoxyribonuclease III [Haemophilus influenzae PittHH]
 gi|260580655|ref|ZP_05848482.1| exodeoxyribonuclease III [Haemophilus influenzae RdAW]
 gi|1169570|sp|P44318|EX3_HAEIN RecName: Full=Exodeoxyribonuclease III; Short=EXO III;
           Short=Exonuclease III
 gi|1572987|gb|AAC21719.1| exodeoxyribonuclease III (xthA) [Haemophilus influenzae Rd KW20]
 gi|145270053|gb|EDK09990.1| exodeoxyribonuclease III [Haemophilus influenzae PittHH]
 gi|260092717|gb|EEW76653.1| exodeoxyribonuclease III [Haemophilus influenzae RdAW]
          Length = 267

 Score =  205 bits (522), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 82/267 (30%), Positives = 128/267 (47%), Gaps = 8/267 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A I++  PD+I LQE K  D+ FP+E  ++L YH+   GQK
Sbjct: 1   MKFISFNINGLRARPHQLEAIIEKYQPDVIGLQEIKVADEAFPYEITENLGYHVFHHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122
            + GVA+L+K +P  I    P D+ D Q R I A        L + N Y P G      T
Sbjct: 61  GHYGVALLTKQEPKVIRRGFPTDNEDAQKRIIMADLETEFGLLTVINGYFPQGESRAHET 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  +     ++  +  +   P++  GD NI P         +     +      F 
Sbjct: 121 KFPAKEKFYADLQQYLEKEHDKSNPILIMGDMNISPSDLDIGIGDENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R  +Q+L + G  D+ R  + T +  +S++DY +  +  N+G+RIDHI++S +    
Sbjct: 181 PEERAWYQRLYDYGLEDSFRKLNPTANDKFSWFDYRSKGFDDNRGLRIDHILVSQKLAER 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262
                I    R   KPSDH P+     
Sbjct: 241 CVDVGIALDIRAMEKPSDHAPIWAEFK 267


>gi|331014335|gb|EGH94391.1| exonuclease III [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 270

 Score =  205 bits (522), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 90/269 (33%), Positives = 136/269 (50%), Gaps = 11/269 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +RAR H LAA I ++ PD+I LQETK  D+ FP   +++L YH+   GQK
Sbjct: 1   MKIVSFNINGLRARPHQLAALIDKHQPDVIGLQETKVSDEQFPLADVEALGYHVHFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122
            + GVA+LS+  P+ +     GDD + Q RFI  T+   N Q + I N Y P G      
Sbjct: 61  GHYGVALLSRNPPLALHKGFEGDDEESQKRFIWGTYADSNGQPVTIMNGYFPQGESRDHP 120

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175
            K+  K  + +        +   E+PLI  GD NI PQ        D     +      F
Sbjct: 121 TKFPAKQRFYENLQALLEGQFSNEQPLIVMGDVNISPQDCDIGIGADNAKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232
             E R+  ++L+N G  D+ R  +      +S++DY +  +     +G+RID IM S   
Sbjct: 181 LPEEREWMERLKNWGLVDSFRYLYPEVSDRFSWFDYRSRGFEDEPKRGLRIDLIMTSTGL 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
              + +A +D   RG  KPSDH P+ + L
Sbjct: 241 QPRIKAAGVDYDLRGMEKPSDHAPIWLEL 269


>gi|297537413|ref|YP_003673182.1| exodeoxyribonuclease III Xth [Methylotenera sp. 301]
 gi|297256760|gb|ADI28605.1| exodeoxyribonuclease III Xth [Methylotenera sp. 301]
          Length = 260

 Score =  205 bits (522), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 90/259 (34%), Positives = 140/259 (54%), Gaps = 5/259 (1%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
              +ATWNVNS+  R+ ++  W+++N  D++CLQETK ED  FP+  L+   Y+    GQ
Sbjct: 5   TFKLATWNVNSLNVRLQHVLDWLRDNPIDVLCLQETKQEDSKFPYTELKEAGYNAIHSGQ 64

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K+YNGVAILS +   E+   +   +   +              +R+  +Y+ +G  + S 
Sbjct: 65  KTYNGVAILSTHDMTEVEHGIADFEDGQKRVISATING-----VRVVCVYIVNGQAVDSE 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           KY+ K+ W+     + +  L+    L+  GDYNI P+  DC++P  W      + + R+ 
Sbjct: 120 KYEYKMRWLTALNTWLAGELKKYPKLVVLGDYNIAPEDRDCHDPAAWLGQILVSPQEREH 179

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           FQKL  +G  D+ R        +S+WDY    + +N G+RIDHI++S    S   +A ID
Sbjct: 180 FQKLLQLGLHDSFRLFEQAEKSFSWWDYRMMGFRRNFGMRIDHILVSDALKSACIAATID 239

Query: 243 TKPRGWTKPSDHTPVIVSL 261
             PR   +PSDHTPVI+ L
Sbjct: 240 KAPRKLERPSDHTPVILEL 258


>gi|326775686|ref|ZP_08234951.1| exodeoxyribonuclease III Xth [Streptomyces cf. griseus XylebKG-1]
 gi|326656019|gb|EGE40865.1| exodeoxyribonuclease III Xth [Streptomyces cf. griseus XylebKG-1]
          Length = 259

 Score =  205 bits (522), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 77/260 (29%), Positives = 127/260 (48%), Gaps = 1/260 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+NVNSI AR+  L AW++ +  D++C+QETK   + FP E L+   Y        
Sbjct: 1   MRIATYNVNSITARLPRLLAWLESSGTDVLCVQETKCTAEQFPAEALREAGYASAVNATG 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVA+LS+    ++VT LP        +   A        LR+ ++Y+P+G  +    
Sbjct: 61  RWNGVALLSRVGLSDVVTGLPDGPEYEGVQEPRAISATCGP-LRLWSVYVPNGREVEHAH 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W++   +  +       P    GD+N+ P   D ++P ++E     T   R + 
Sbjct: 120 YAYKLRWLEALRKAVAADAAKALPFAVLGDFNVAPTDEDVWDPALFEGATHVTPAERVAL 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             L+  G ++           Y+FWDY    + KNKG+RID    +   T+ +  + +D 
Sbjct: 180 AALEAEGLSEVHPRPLKYDRAYTFWDYRELRFPKNKGMRIDLTFGNAPFTAAVKDSYVDR 239

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
           + R     SDH PV+V LD+
Sbjct: 240 EERKGKGASDHAPVVVDLDL 259


>gi|312796736|ref|YP_004029658.1| Exodeoxyribonuclease III [Burkholderia rhizoxinica HKI 454]
 gi|312168511|emb|CBW75514.1| Exodeoxyribonuclease III (EC 3.1.11.2) [Burkholderia rhizoxinica
           HKI 454]
          Length = 259

 Score =  205 bits (522), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 81/259 (31%), Positives = 133/259 (51%), Gaps = 1/259 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+NS++ R+ ++  W+  +  D++CLQE K  D  +P   L++  Y     GQK
Sbjct: 1   MKIATWNINSLKVRLQHVIDWLAMSRVDVLCLQELKLPDDKYPRAALEAAGYRSWFSGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAIL +   + +   +   ++       +         +R+ + Y P+G    + K
Sbjct: 61  TYNGVAILVRDG-LPVDEAVVIRNIPGFDDLQQRLIAATIDGVRVVSAYFPNGQAPGTDK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+SW+     + +  +         GDYNI P+  D ++P  WE     + E R +F
Sbjct: 120 FAYKLSWLAALREWVAAEMRAHPQFALTGDYNIAPEDRDVHDPQAWEGQNLVSPEERDAF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + L  +G  DA R        +S+WDY   ++ +N G+RIDHI+LSP       +  ID 
Sbjct: 180 RSLVELGLVDAFRCFEQPDKSFSWWDYRMLAFRRNAGLRIDHILLSPSLAQCCSACEIDK 239

Query: 244 KPRGWTKPSDHTPVIVSLD 262
            PR W +PSDH PVI +L+
Sbjct: 240 TPRRWDQPSDHAPVIATLE 258


>gi|307294591|ref|ZP_07574433.1| exodeoxyribonuclease III Xth [Sphingobium chlorophenolicum L-1]
 gi|306879065|gb|EFN10283.1| exodeoxyribonuclease III Xth [Sphingobium chlorophenolicum L-1]
          Length = 256

 Score =  205 bits (522), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 103/259 (39%), Positives = 155/259 (59%), Gaps = 5/259 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+N+N I+AR+  L  W+ E  PDI CLQE KT D+ FP + ++ + Y     GQK
Sbjct: 1   MRIATFNINGIKARLPRLLEWLDETRPDIACLQEIKTSDETFPVKDIEDVGYGAIWHGQK 60

Query: 64  SYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
            +NGVAIL++   P+E+   L G+  D  +R++EA        LR+ ++YLP+GNP    
Sbjct: 61  GFNGVAILARGETPVEVRRGLEGEPEDEHSRYLEADVKG----LRVASIYLPNGNPQPGP 116

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           K+D K+ W+KR    A++    E P I AGDYN+IP+  D Y+     +DA    E R +
Sbjct: 117 KFDYKLRWMKRLRARATEIWAEEVPAILAGDYNVIPRDKDVYSVKAMADDALMQPESRAA 176

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           +++L   G+TDAI + H    ++++WDY  ++W ++ G RIDH++LSP A   L  A++D
Sbjct: 177 YRRLLGDGWTDAIASRHPAGGVWTYWDYQMNAWPRDAGFRIDHLLLSPAAADRLIDAQVD 236

Query: 243 TKPRGWTKPSDHTPVIVSL 261
              RG  K SDH P  V L
Sbjct: 237 KDFRGREKASDHAPTWVEL 255


>gi|331653152|ref|ZP_08354157.1| exodeoxyribonuclease III [Escherichia coli M718]
 gi|331049250|gb|EGI21322.1| exodeoxyribonuclease III [Escherichia coli M718]
          Length = 272

 Score =  205 bits (522), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 79/268 (29%), Positives = 125/268 (46%), Gaps = 8/268 (2%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + +   ++N+N +RAR H L A ++++ PD+I LQETK  D  FP E +  L Y++   G
Sbjct: 3   ATMKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHG 62

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           QK + GVA+L+K  PI +    PGDD + Q R I A        + + N Y P G     
Sbjct: 63  QKGHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMADIPSPLGNVTVINGYFPQGESRDH 122

Query: 122 TK-YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDAC 174
              +  K  + +    +    L+ E P++  GD NI P         +     +      
Sbjct: 123 PIKFPAKAQFYQNLQNYLETELKRENPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCS 182

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
           F  E R+  ++L + G  D  R  +      +S++DY +  +  N+G+RID ++ S    
Sbjct: 183 FLPEEREWMERLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLA 242

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSL 261
                  ID + R   KPSDH PV  + 
Sbjct: 243 ECCVETGIDYEIRSMEKPSDHAPVWATF 270


>gi|118464012|ref|YP_883854.1| exodeoxyribonuclease III [Mycobacterium avium 104]
 gi|118165299|gb|ABK66196.1| exodeoxyribonuclease III [Mycobacterium avium 104]
          Length = 272

 Score =  205 bits (522), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 76/264 (28%), Positives = 122/264 (46%), Gaps = 7/264 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSIR+R+  +  W+   + D++ +QETK  D  FP      L Y +   G  
Sbjct: 1   MRLATWNVNSIRSRLPRVLDWLARTDVDVLAMQETKCADGQFPTLPFFELGYEVAHVGFN 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQAR-----FIEATFTINTQTLRIGNLYLPHGNP 118
            +NGVAI S+    ++     G                         +RI +LY+P+G  
Sbjct: 61  QWNGVAIASRVGLDDVRVGFEGQPSWSGKPEVAAAAEARALAATCAGVRIWSLYVPNGRA 120

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEE--PLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
           +    Y  K+ W+      A+  L  +    +  AGD+NI PQ  D ++   +      +
Sbjct: 121 VGDPHYAYKLDWLAALRDSAAGWLREDPAAQIALAGDWNIAPQDDDVWSMEFFAGATHVS 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
              R++F  + +  F D +R       +Y++WDY A  + K +G+RID I+ SP     +
Sbjct: 181 EPERRAFNAILDAQFADLVRPFAPGPGVYTYWDYTALRFPKRQGMRIDFILGSPALARRV 240

Query: 237 HSARIDTKPRGWTKPSDHTPVIVS 260
             A+ID + R     SDH PV+V 
Sbjct: 241 THAQIDREERKGKGASDHAPVLVD 264


>gi|119715318|ref|YP_922283.1| exodeoxyribonuclease III [Nocardioides sp. JS614]
 gi|119535979|gb|ABL80596.1| Exodeoxyribonuclease III [Nocardioides sp. JS614]
          Length = 262

 Score =  205 bits (522), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 75/263 (28%), Positives = 128/263 (48%), Gaps = 7/263 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+R+RI  + A++  +  D++ LQETK  +   P   +++  Y +   G  
Sbjct: 1   MRIATWNVNSLRSRIDRVEAFLDRHEVDVLALQETKAREDQLPLMGIEARGYEVAVAGAN 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-----TQTLRIGNLYLPHGNP 118
            +NGVA++S+    ++    PG     +     A             +RI +LY+P+G  
Sbjct: 61  QWNGVAVISRVGLSDVAVGFPGQPGWAKDVQRAAETESRAIGATCGGVRIWSLYVPNGRK 120

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
                Y  K+ W+ R     + +   ++ +   GD+NI P   D ++   +      T  
Sbjct: 121 PDDPHYVYKLDWLAR--LRDAAQAWRDQDVALVGDWNIAPTDEDVFDMAQFARSTHVTPP 178

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
            R +FQ     G+ D +R       +Y++WDYY   + +N+G+RID ++ SP   + +  
Sbjct: 179 ERAAFQAFLEDGYVDVVRPHAPGPEVYTYWDYYRQRYERNRGMRIDFVLGSPSLAARVTG 238

Query: 239 ARIDTKPRGWTKPSDHTPVIVSL 261
           A ID + R  T  SDH PV+V L
Sbjct: 239 AFIDREERAGTGASDHAPVVVDL 261


>gi|290475444|ref|YP_003468332.1| exonuclease III [Xenorhabdus bovienii SS-2004]
 gi|289174765|emb|CBJ81566.1| exonuclease III [Xenorhabdus bovienii SS-2004]
          Length = 268

 Score =  205 bits (522), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 86/266 (32%), Positives = 128/266 (48%), Gaps = 8/266 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H LAA ++++ PD+I LQETK  D+ FP E +  L YHI   GQK
Sbjct: 1   MKFVSFNINGLRARPHQLAAIVEQHQPDVIGLQETKVHDEMFPLEEVSKLGYHIFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122
           S+ GVA+L++ QP+ +    P DD D Q R I A        + I N Y P G       
Sbjct: 61  SHYGVALLTRQQPVTVRKGFPTDDDDAQRRIIMADIETPQGLMTIINGYFPQGESREHPV 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE------NDACFT 176
           K+  K  + +   R+  +    +  ++  GD NI P   D       +          F 
Sbjct: 121 KFPAKEKFYQDLNRYLEKNQSPDSHILIMGDMNISPTDLDIGIGENNQKRWLKTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+   +L++ G  D  RA H      +S++DY +  +  N+G+RID ++ S      
Sbjct: 181 PEEREWMGRLKDWGLIDTFRAQHPEASDQFSWFDYRSKGFDDNRGLRIDLLLASRPLAER 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
             S+ ID   R   KPSDH PV    
Sbjct: 241 CLSSGIDYAIRSMEKPSDHAPVWAEF 266


>gi|167856041|ref|ZP_02478785.1| exodeoxyribonuclease III [Haemophilus parasuis 29755]
 gi|219870568|ref|YP_002474943.1| exonuclease III [Haemophilus parasuis SH0165]
 gi|167852836|gb|EDS24106.1| exodeoxyribonuclease III [Haemophilus parasuis 29755]
 gi|219690772|gb|ACL31995.1| exonuclease III [Haemophilus parasuis SH0165]
          Length = 267

 Score =  205 bits (522), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 86/267 (32%), Positives = 130/267 (48%), Gaps = 8/267 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A I+++ PD+I LQE K  D++FP++ +  L YH+   GQK
Sbjct: 1   MKFISFNINGLRARPHQLEALIEKHQPDVIGLQEIKVADEDFPYDLVNHLGYHVFHHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122
            + GVA+L+K QP+ +    P D+ D Q R I A       TL + N Y P G   +  T
Sbjct: 61  GHYGVALLTKNQPLAVRKGFPTDNADAQKRMIMADLETPFGTLTVLNGYFPQGENRSHET 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACFT 176
           K+  K  +     R+    L+ E P++  GD NI P   D           + +    F 
Sbjct: 121 KFPAKEKFYADLQRYLETELKPENPIVIMGDMNISPTDLDIGLGEVNRKRWLRDGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+   +L   G  D  RA + T    +S++DY +  +  N+G+RID ++ S      
Sbjct: 181 PEEREWLGRLHGYGLVDTFRAMNPTAEDKFSWFDYRSKGFDDNRGLRIDLVLASTPLAER 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262
                ID + R   KPSDH PV     
Sbjct: 241 CVETGIDLEIRAMDKPSDHAPVWAVFK 267


>gi|332039522|gb|EGI75929.1| exodeoxyribonuclease III Xth [Hylemonella gracilis ATCC 19624]
          Length = 268

 Score =  205 bits (522), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 91/265 (34%), Positives = 126/265 (47%), Gaps = 7/265 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNP-----DIICLQETKTEDKNFPFETLQSLNYHIE 58
           + +ATWNVNS+  R+  +  W+          D++ LQE K  D  FP    ++  Y  E
Sbjct: 1   MKLATWNVNSLGVRLPQVLDWLAAQAAGGAPIDVLALQELKLTDDKFPHAEFEAAGYRAE 60

Query: 59  TCGQKSYNGVAILSKY--QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
             GQK+YNGVA++S+     +  VT       D QAR I AT       LRI N Y  +G
Sbjct: 61  AYGQKTYNGVALISRLSLPALRDVTRNITGFEDEQARVIVATLDTPQGPLRIVNGYFVNG 120

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
               S K+  K+ W+          L     L+  GDYNI P   D Y+P         T
Sbjct: 121 QEPGSEKFAYKMRWMDALRAQVQAELATHARLVLLGDYNITPDDRDSYDPEGLRETIHHT 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
            + R+ F+ L  +G  DA R        YS+WDY    + KN+G+RIDHI++S      +
Sbjct: 181 TQEREQFKALLALGLHDAYRMFEQPEKSYSWWDYRMLGFQKNRGLRIDHILVSEALKPAV 240

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSL 261
               ID  PR   +PSDH PV++ L
Sbjct: 241 QGCTIDRLPRKNKQPSDHAPVLLEL 265


>gi|300716986|ref|YP_003741789.1| Exodeoxyribonuclease III [Erwinia billingiae Eb661]
 gi|299062822|emb|CAX59942.1| Exodeoxyribonuclease III [Erwinia billingiae Eb661]
          Length = 272

 Score =  205 bits (522), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 82/272 (30%), Positives = 129/272 (47%), Gaps = 8/272 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H LAA I+++ PD+I LQETK  D  FP E +  L YH+   GQK
Sbjct: 1   MKFVSFNINGLRARPHQLAAIIEQHQPDVIGLQETKVHDDMFPLEEVSKLGYHVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122
            + GVA+L+K +P+ +     GDD + Q R I A       TL + N Y P G       
Sbjct: 61  GHYGVALLTKDEPLAVRRGFAGDDEESQRRMIMADIATPVGTLTVLNGYFPQGESRDHPT 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  + +    +     +   P++  GD NI           D     +      F 
Sbjct: 121 KFPAKEKFYRDLQSYLENDQKPTNPVVIMGDMNISATDLDIGIGEDNRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+   +L   G  D  RA + + +  +S++DY +  +  N+G+RID ++ S    + 
Sbjct: 181 PEEREWMDRLMGWGLVDTWRAENAEANDRFSWFDYRSKGFDDNRGLRIDLVLASQPLAAR 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDIPEPR 267
             +  ID   R   KPSDH P+    ++ E +
Sbjct: 241 CVATGIDYDIRSMEKPSDHAPIWAQFNLDEAK 272


>gi|148240155|ref|YP_001225542.1| exodeoxyribonuclease III [Synechococcus sp. WH 7803]
 gi|147848694|emb|CAK24245.1| Exodeoxyribonuclease III [Synechococcus sp. WH 7803]
          Length = 276

 Score =  205 bits (522), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 86/264 (32%), Positives = 137/264 (51%), Gaps = 4/264 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A+WNVNS+R R+ ++  W+  N  D++ LQETK +D  FP +  Q   YH+   GQK
Sbjct: 1   MRIASWNVNSVRTRLEHVLGWLDRNTIDVLALQETKVDDPLFPLKPFQERGYHLSIHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN----TQTLRIGNLYLPHGNPI 119
           SYNGVA++S+    ++     G+           T           +R+ NLY+P+G+ +
Sbjct: 61  SYNGVALISRQPLEDVRLGFTGELPGDADAEALGTQKRVISALVDGIRVVNLYVPNGSSL 120

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
            S KY  K++W+    R+       +EPL   GD+NI P+  D ++P         +   
Sbjct: 121 DSEKYSYKLNWMGCLERYLRAAETRDEPLCVVGDFNIGPEARDLHDPERLTGGIMASEAE 180

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R++  ++      DA R        +S+WDY + +W+++ G RIDHI +S +   L  S 
Sbjct: 181 RKALVQVLGSNLGDAFRLFEPGSGHWSWWDYRSGAWNRDSGWRIDHIYISSDLQELARSC 240

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
            ID + RG  +PSDH PV+V L  
Sbjct: 241 SIDKEERGREQPSDHAPVVVDLAW 264


>gi|262274649|ref|ZP_06052460.1| exodeoxyribonuclease III [Grimontia hollisae CIP 101886]
 gi|262221212|gb|EEY72526.1| exodeoxyribonuclease III [Grimontia hollisae CIP 101886]
          Length = 300

 Score =  205 bits (522), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 81/270 (30%), Positives = 130/270 (48%), Gaps = 9/270 (3%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           S + V ++N+N +RAR+H L A I+++ PD+I LQE K  D+ FP E ++++ Y +   G
Sbjct: 31  SSMKVISFNINGLRARLHQLQALIEKHQPDVIGLQEIKVHDEAFPVEDVEAMGYKVYFHG 90

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLD-VQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           QK++ GVA+L K  P+ +    P D  D  +   +      +   + + N Y P G  I 
Sbjct: 91  QKAHYGVAMLCKQTPVRVQKGFPTDGEDAQRRMIMATFKQEDGSEVTVLNGYFPQGENIE 150

Query: 121 S-TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDA 173
             TK+  K  + +  + + +     +E LI  GD NI P   D           +     
Sbjct: 151 HETKFPAKRKFYQDLMTYLNASHTNDEKLIVMGDINISPLDLDIGIGEVNRKRWLKTGKC 210

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
            F  E R+    L N GF D  R  +    + +S++DY +  +  N+G+RID I+ +P  
Sbjct: 211 SFQPEEREMLATLMNWGFVDTFRQQYPDVDNKFSWFDYRSRGFDDNRGLRIDVILATPSL 270

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
                   ID + RG  KPSDH P+  +  
Sbjct: 271 AVDCIDTGIDYELRGIEKPSDHAPIWATFK 300


>gi|172038905|ref|YP_001805406.1| exodeoxyribonuclease III [Cyanothece sp. ATCC 51142]
 gi|171700359|gb|ACB53340.1| exodeoxyribonuclease III [Cyanothece sp. ATCC 51142]
          Length = 262

 Score =  205 bits (522), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 90/262 (34%), Positives = 140/262 (53%), Gaps = 4/262 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSIR R  ++  W+  N+ D++CLQETK  DK+FP E  + L YH+   GQK
Sbjct: 1   MKIATWNVNSIRTRQSHVINWLSNNSIDVLCLQETKVIDKDFPREPFEELGYHVYIYGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT---QTLRIGNLYLPHGNPIT 120
           +YNGVAI S+    +I+        +  A+  +    + +     +RI NLY+P+G  + 
Sbjct: 61  AYNGVAIFSRQPMTDIIMGFTPMVGEAIAQQFDEQKRVISGVIDGIRIINLYVPNGAAVG 120

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPL-IFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
           S KY  K+ W +    +    ++ E       GD+NI  +  D YN    EN    +   
Sbjct: 121 SEKYQYKLQWFQVLKVYLDNLIQKESHELCICGDFNIALEDKDIYNSKGKENHIMSSPLE 180

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R++ + +  +G  DA R        +S+WDY +  + +N+G RIDH+ L+ +      + 
Sbjct: 181 REALENILEIGLQDAFRKFTTEGGHFSWWDYRSGGFQRNRGWRIDHLYLTNKLYGKAINC 240

Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261
            ID +PR   KPSDHTPVI+ +
Sbjct: 241 TIDIEPRKQEKPSDHTPVILEI 262


>gi|330810622|ref|YP_004355084.1| exodeoxyribonuclease III [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327378730|gb|AEA70080.1| exodeoxyribonuclease III [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 270

 Score =  205 bits (522), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 88/269 (32%), Positives = 134/269 (49%), Gaps = 11/269 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +RAR H LAA I+++ PD+I LQETK  D+ FP   +Q+L YH+   GQK
Sbjct: 1   MKIVSFNINGLRARPHQLAALIEKHQPDVIGLQETKVHDEQFPLAEVQALGYHVHYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122
            + GVA+LS+  P+ +     GDD D Q RFI  TF   N   + I N Y P G      
Sbjct: 61  GHYGVALLSRQAPLSLYKGFEGDDEDAQRRFIWGTFADANGVPVTIMNGYFPQGESRDHP 120

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE------NDACF 175
            K+  K  +     +    R   ++P++  GD NI P+  D                  F
Sbjct: 121 TKFPAKERFYSDLQQLLESRFSNDQPVVVMGDVNISPEDCDIGIGPDNMKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232
             E R+   +L+N G  D+ R  +      +S++DY +  +     +G+RID I+ S   
Sbjct: 181 LPEEREWMARLKNWGLVDSFRHLNPDVTDRFSWFDYRSRGFEDEPKRGLRIDLILTSHGL 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
              +  A +D + RG  KPSDH P+ + L
Sbjct: 241 LPRVKDAGVDYELRGMEKPSDHAPIWLQL 269


>gi|183599301|ref|ZP_02960794.1| hypothetical protein PROSTU_02765 [Providencia stuartii ATCC 25827]
 gi|188021535|gb|EDU59575.1| hypothetical protein PROSTU_02765 [Providencia stuartii ATCC 25827]
          Length = 271

 Score =  205 bits (522), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 85/268 (31%), Positives = 131/268 (48%), Gaps = 8/268 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H LAA I ++ P++I LQETK  D+ FP++ +  L YH+   GQK
Sbjct: 1   MKFISFNINGLRARPHQLAAIIDKHQPEVIGLQETKVHDEMFPYDDVSKLGYHVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122
           ++ GVA+L+K +P+ +    P DD D Q R I A    N   L + N Y P G       
Sbjct: 61  AHYGVALLTKNKPVAVRKGFPTDDDDAQRRIIMADIETNHGLLTVVNGYFPQGESREHPV 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  + +    + +     +  L+  GD NI P               +      F 
Sbjct: 121 KFPAKEKFYQDLQDYITSTQTPQSQLLIMGDMNISPTDLDIGIGEANRKRWLKTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R   ++L N G  D  RA +      YS++DY +  +  N+G+RID ++ S   ++ 
Sbjct: 181 PEERAWMERLLNWGLVDTYRAMNPDVDDCYSWFDYRSKGFDDNRGLRIDLLLASTALSTR 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             +  ID + RG  KPSDH PV    D+
Sbjct: 241 CVATGIDYEIRGMEKPSDHAPVWAEFDL 268


>gi|118594091|ref|ZP_01551438.1| Exodeoxyribonuclease III:Exodeoxyribonuclease III xth
           [Methylophilales bacterium HTCC2181]
 gi|118439869|gb|EAV46496.1| Exodeoxyribonuclease III:Exodeoxyribonuclease III xth
           [Methylophilales bacterium HTCC2181]
          Length = 260

 Score =  205 bits (522), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 87/259 (33%), Positives = 139/259 (53%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +  +ATWNVNS+  R+ ++  W+K +NPDI+CLQETK  +  F  E   S+ Y     GQ
Sbjct: 1   MTKIATWNVNSLNVRLEHVIDWVKIHNPDILCLQETKQTNDKFSHEAFDSIGYKSYHNGQ 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K+YNGVAI+S  +   + + +PG     +        + +   + + + Y+P+G  + S 
Sbjct: 61  KTYNGVAIISNKELQNVGSDIPGFSDPQKRIIHGLYPSRSLGLIHVVSAYVPNGQSLDSE 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           K+  K+SW++ F  +        +  I  GD+NI P+  DC++P  W+ +   +   R  
Sbjct: 121 KFKYKVSWLEAFNTWVKSSYGKSDHHILTGDFNIAPRDIDCHDPEAWKGNILVSQIERDL 180

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F  + ++GF D+ R  +     +S+WDY    + +N G+RIDHI+ S      L +A ID
Sbjct: 181 FDAIIDIGFDDSFRVLNKDIQKFSWWDYRMAGFRRNLGMRIDHILTSHSLKENLTTAYID 240

Query: 243 TKPRGWTKPSDHTPVIVSL 261
             PR   +PSDHTPVI   
Sbjct: 241 EDPRKLERPSDHTPVITEF 259


>gi|116073418|ref|ZP_01470680.1| Exodeoxyribonuclease III xth [Synechococcus sp. RS9916]
 gi|116068723|gb|EAU74475.1| Exodeoxyribonuclease III xth [Synechococcus sp. RS9916]
          Length = 276

 Score =  205 bits (522), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 91/273 (33%), Positives = 141/273 (51%), Gaps = 5/273 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A+WNVNS+R R+ ++ AW++ + PD++CLQETK  D  FP    +S+ Y +   GQK
Sbjct: 1   MLIASWNVNSVRTRLDHVLAWLQSHQPDLLCLQETKVADPLFPQTAFESIGYRVSFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT----QTLRIGNLYLPHGNPI 119
           SYNGVA++S+    ++     G+                       +R+ NLY+P+G+ +
Sbjct: 61  SYNGVALISRTPLDDVRCGFIGELPGDLEAGELGEQKRVISALLDGVRVVNLYVPNGSSL 120

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
           TS KY  K+ W+    R+     E +EPL   GD+NI  +  D ++P         +   
Sbjct: 121 TSDKYPYKLKWLNCLKRYREAAQERDEPLCIVGDFNIGMEARDIHDPERLTGGIMASDAE 180

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R +  +    G  D  RA       +S+WDY + +W+++ G RIDHI LS +   L  S 
Sbjct: 181 RTALNEALGEGMVDVFRAFEPDAGHWSWWDYRSGAWNRDSGWRIDHIYLSEDLLDLARSC 240

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQD 272
            I  + RG  +PSDH PV+V L  P P   + D
Sbjct: 241 VIHKQERGKEQPSDHAPVVVDLCWP-PEDDEDD 272


>gi|33596079|ref|NP_883722.1| putative exodeoxyribonuclease III [Bordetella parapertussis 12822]
 gi|33601475|ref|NP_889035.1| putative exodeoxyribonuclease III [Bordetella bronchiseptica RB50]
 gi|33573082|emb|CAE36724.1| putative exodeoxyribonuclease III [Bordetella parapertussis]
 gi|33575911|emb|CAE32990.1| putative exodeoxyribonuclease III [Bordetella bronchiseptica RB50]
          Length = 260

 Score =  205 bits (522), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 87/258 (33%), Positives = 130/258 (50%), Gaps = 1/258 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+  R+  +  W+  N  D +C+QE K  D  FP +      YH    GQK
Sbjct: 1   MKLATWNVNSLNVRLPQVLDWLAANPVDALCIQELKLTDDKFPLDAFTEAGYHAAWAGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAI+S+     +V + P    D Q R +  T       +R+   Y P+G  + S K
Sbjct: 61  TYNGVAIISREPGFALVRNNP-RYEDPQQRILAVTLPSPAGDVRVICAYCPNGQSVDSDK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K++W      +  + +     L   GDYN+ P   D +NP  WE     +   R +F
Sbjct: 120 YVYKLAWFDGLRDWLEEEMRTYPRLAILGDYNVAPADADVHNPEKWEGQVLVSEPERAAF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + L ++G TD+ R        +S+WDY   ++ +N G+RIDH++LS        +  ID 
Sbjct: 180 RALLDLGLTDSFRLFEQPEKSFSWWDYRQFAFRRNAGLRIDHVLLSDALKPHCVACVIDK 239

Query: 244 KPRGWTKPSDHTPVIVSL 261
            PR   +PSDH PVI +L
Sbjct: 240 APRANEQPSDHAPVIATL 257


>gi|300917685|ref|ZP_07134334.1| exodeoxyribonuclease III [Escherichia coli MS 115-1]
 gi|300415086|gb|EFJ98396.1| exodeoxyribonuclease III [Escherichia coli MS 115-1]
          Length = 272

 Score =  205 bits (522), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 78/268 (29%), Positives = 124/268 (46%), Gaps = 8/268 (2%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + +   ++N+N +RAR H L A ++++ PD+I LQETK  D  FP E +  L Y++   G
Sbjct: 3   ATMKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHG 62

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           QK + GVA+L+K  PI +    PGDD + Q R I A        + + N Y P G     
Sbjct: 63  QKGHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSLLGNVTVINGYFPQGESRDH 122

Query: 122 TK-YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDAC 174
              +  K  + +    +    L+ + P++  GD NI P         +     +      
Sbjct: 123 PIKFPAKAQFYQNLQNYLETELKRDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCS 182

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
           F  E R+   +L + G  D  R  +      +S++DY +  +  N+G+RID ++ S    
Sbjct: 183 FLPEEREWMDRLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLA 242

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSL 261
                  ID + R   KPSDH PV  + 
Sbjct: 243 ECCVETGIDYEIRSMEKPSDHAPVWATF 270


>gi|226944961|ref|YP_002800034.1| exonuclease III [Azotobacter vinelandii DJ]
 gi|226719888|gb|ACO79059.1| exodeoxyribonuclease III [Azotobacter vinelandii DJ]
          Length = 270

 Score =  205 bits (521), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 87/270 (32%), Positives = 133/270 (49%), Gaps = 11/270 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +RAR H L+A I ++ PD+I LQETK  D+ FP E +  L YH+   GQK
Sbjct: 1   MKIVSFNINGLRARPHQLSALIDKHRPDVIGLQETKVADEQFPLEQIGELGYHVHYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122
            + GVA+LS+  P+E+    P D  D Q RFI   +     Q + + N Y P G      
Sbjct: 61  GHYGVALLSRQPPLEVQKGFPDDGEDSQKRFIWGVYADAAGQPVTVMNGYFPQGESRAHP 120

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175
            K+  K  +          R +  +PL   GD+NI P+  D           +      F
Sbjct: 121 LKFPAKTRFYADLQALLESRFDPGQPLALMGDFNIAPEDSDIGIGAENARRWLRTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKN--KGIRIDHIMLSPEA 232
             E R+   +L++ G  D+ R  H      +S++DY +  +  +  +G+RID I+ S   
Sbjct: 181 LPEEREWMARLKDWGLQDSFRELHPQACDRFSWFDYRSRGFEDDPRRGLRIDLILTSRAL 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
              L +A +D + R   KPSDH PV + LD
Sbjct: 241 RPRLRAADVDYELRAMDKPSDHAPVWLELD 270


>gi|91784274|ref|YP_559480.1| exodeoxyribonuclease III [Burkholderia xenovorans LB400]
 gi|91688228|gb|ABE31428.1| Exodeoxyribonuclease III [Burkholderia xenovorans LB400]
          Length = 258

 Score =  205 bits (521), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 83/258 (32%), Positives = 131/258 (50%), Gaps = 1/258 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS++ R  ++  W++ +  D++CLQE K  D+ FP   L+   Y     GQK
Sbjct: 1   MKIATWNVNSLKVRQQHVIDWLETSGTDVLCLQELKLPDEKFPRAELEEKGYRSWFAGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGV IL +   + +       ++       +         +RI + Y P+G    + K
Sbjct: 61  TYNGVGILVRGG-LTVDESSIVRNIPGFEDPQQRVIAATIDGVRIISAYFPNGQAPGTDK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W+     + +  + L   L   GDYNI P+  D ++P  WE     + E R +F
Sbjct: 120 FAYKLRWLAALHDWIASEMALHPKLALLGDYNIAPEDRDVHDPKAWEGQNLVSPEERAAF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            +L  +G  DA R       +YS+WDY   ++ +N G+RIDHI+LS     +  S  +D 
Sbjct: 180 VQLIGLGLVDAFRQFEQPEKIYSWWDYRMMAFRRNAGLRIDHILLSKALAEICSSCEVDK 239

Query: 244 KPRGWTKPSDHTPVIVSL 261
            PR W +PSDH PV+  L
Sbjct: 240 VPRKWDQPSDHAPVVAQL 257


>gi|71083659|ref|YP_266379.1| exodeoxyribonuclease III [Candidatus Pelagibacter ubique HTCC1062]
 gi|71062772|gb|AAZ21775.1| exodeoxyribonuclease III [Candidatus Pelagibacter ubique HTCC1062]
          Length = 258

 Score =  205 bits (521), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 96/258 (37%), Positives = 158/258 (61%), Gaps = 1/258 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + +WNVNS+RARI N+  ++++ +PD++ +QE KT+D+ FP++   +L+Y     GQK
Sbjct: 1   MIITSWNVNSVRARIENIKEYLQKFSPDVVMMQEIKTQDETFPYDDFSALDYESHVFGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           SYNGVAI+SK++   +   L  D L               + +++ N+Y P+GNP+ + K
Sbjct: 61  SYNGVAIISKHKLENVKIDLIKDKLKQSRIISA-ELKHKKKNIQLINIYTPNGNPVDTDK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K +W+ + ++      +  E +I AGD+NI+P   D YN   +E+DA + LE+R+ F
Sbjct: 120 YTYKKNWLDKLIKQLKTLSKKNENIILAGDFNILPSAEDAYNIKGFEDDALYRLEIRKKF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           +++ N+GF DA R  H     Y++WDY   +W KN G+RIDH ++S    +++ +  I+ 
Sbjct: 180 REMINLGFHDAYRHIHGEKEGYTYWDYMRGAWQKNNGLRIDHFLVSNSLLNIVKNVNINK 239

Query: 244 KPRGWTKPSDHTPVIVSL 261
            PRG  KPSDHTP+ + L
Sbjct: 240 DPRGKGKPSDHTPIEIEL 257


>gi|120610799|ref|YP_970477.1| exodeoxyribonuclease III [Acidovorax citrulli AAC00-1]
 gi|120589263|gb|ABM32703.1| Exodeoxyribonuclease III [Acidovorax citrulli AAC00-1]
          Length = 262

 Score =  205 bits (521), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 111/257 (43%), Positives = 159/257 (61%), Gaps = 5/257 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+NVNSIRAR+  L  W++E+ PD+ CLQE K  D  FP   +++  Y     GQK
Sbjct: 1   MKIATFNVNSIRARLPALLQWLEESRPDVACLQELKCTDDAFPAGEIRAAGYGALWHGQK 60

Query: 64  SYNGVAILSKY-QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           ++NGVAIL++   PIE+   LPGD+ D Q+R++EA        + +  LYLP+GNP    
Sbjct: 61  AWNGVAILARGANPIEVQRGLPGDEADSQSRYLEAAVDG----VLVACLYLPNGNPAPGP 116

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           K+D K++W+ R  R A    +  EP++ AGD+NIIP   D Y P  W +DA F  EVR +
Sbjct: 117 KFDYKLAWLDRLARRAGVLRDRPEPVVLAGDFNIIPTERDVYKPGAWVDDALFRSEVRDA 176

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F+ L + G+TDA+RA H    +Y+FWDY    + +N G+RIDH++L+P A   L  A +D
Sbjct: 177 FRALVDSGWTDALRAVHPDETVYTFWDYLRQRFQRNAGLRIDHLLLNPAAAHRLQDAGVD 236

Query: 243 TKPRGWTKPSDHTPVIV 259
            + RG  +PSDH P   
Sbjct: 237 REVRGRPRPSDHAPAWA 253


>gi|317126375|ref|YP_004100487.1| exodeoxyribonuclease III [Intrasporangium calvum DSM 43043]
 gi|315590463|gb|ADU49760.1| Exodeoxyribonuclease III [Intrasporangium calvum DSM 43043]
          Length = 263

 Score =  205 bits (521), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 75/262 (28%), Positives = 123/262 (46%), Gaps = 3/262 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSIR+R+  +  W+  ++ D++ LQETK  +  FP +  + L Y +   G  
Sbjct: 1   MRIATWNVNSIRSRVDRVTDWLVRSDVDVLALQETKAREDQFPHDRFRELGYEVAHHGLS 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ-TLRIGNLYLPHGNPITST 122
            +NGVAI+S+    ++     G          EA         +RI +LY+P+G  +   
Sbjct: 61  QWNGVAIVSRVGIEDVRVGFDGMPGWGDPAAAEARAIGALCGGVRIWSLYIPNGRTLEDP 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFA--GDYNIIPQPHDCYNPIIWENDACFTLEVR 180
               K+ W+          L  +     A  GD+NI P   D ++   +E     +   R
Sbjct: 121 HLLYKLDWLAALADAGRSWLADDPSAPIALLGDWNIAPFDEDVWSVPFYEGRTHTSPRER 180

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            +FQ + + GF D +R       +Y++WDY    + K +G+RID  + SP     +  A 
Sbjct: 181 AAFQAVVDAGFADVVRPHCPGPGVYTYWDYVQLRFQKGRGMRIDFALCSPALARRVTGAA 240

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           ID + R     SDH PV+  ++
Sbjct: 241 IDREARKGKGASDHAPVVFEIE 262


>gi|312961749|ref|ZP_07776247.1| exodeoxyribonuclease III [Pseudomonas fluorescens WH6]
 gi|311284008|gb|EFQ62591.1| exodeoxyribonuclease III [Pseudomonas fluorescens WH6]
          Length = 270

 Score =  205 bits (521), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 84/269 (31%), Positives = 132/269 (49%), Gaps = 11/269 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +RAR H LAA I+++ PD+I LQETK  D  FP   +Q+L YH+   GQK
Sbjct: 1   MKIVSFNINGLRARPHQLAALIEKHQPDVIGLQETKVHDDQFPLAEVQALGYHVYYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122
            + GVA+LS+ + + +     GD+ D Q RFI  TF   +   + + N Y P G      
Sbjct: 61  GHYGVALLSRQEALSVHKGFLGDEEDAQRRFIWGTFADEHGNPVTVMNGYFPQGESRDHP 120

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175
            K+  K  + +        +   ++ L+  GD NI P+        D     +      F
Sbjct: 121 TKFPAKQRFYEDLQHLLESQFSNDQALVVMGDVNISPEDCDIGIGADNAKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232
             E R+   +L+N G  D+ R  +      +S++DY +  +     +G+RID IM S   
Sbjct: 181 LPEEREWMARLKNWGLVDSFRHLNPDVTDRFSWFDYRSRGFEDEPKRGLRIDVIMASTGL 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
              +  A +D   RG  KPSDH P+ + L
Sbjct: 241 VHRVKDAGVDYDLRGLEKPSDHAPIWLEL 269


>gi|78066923|ref|YP_369692.1| exodeoxyribonuclease III [Burkholderia sp. 383]
 gi|77967668|gb|ABB09048.1| Exodeoxyribonuclease III [Burkholderia sp. 383]
          Length = 258

 Score =  205 bits (521), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 83/256 (32%), Positives = 131/256 (51%), Gaps = 1/256 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+  R  ++  W+ ++  D++CLQE K  D+ FP   L++  Y     GQK
Sbjct: 1   MKIATWNVNSLNVRKQHVLDWLAQSGTDVLCLQELKLPDEKFPRAELEAAGYRSWFTGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAIL++   + +       ++       +         +RI + Y P+G    S K
Sbjct: 61  TYNGVAILARDT-LSVDESDVVRNIPGFDDPQQRVVAATVDGVRIVSAYFPNGQAPDSDK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W+     +    L+    L   GDYNI P+  D ++P  WE     + + R  F
Sbjct: 120 FVYKMQWLDALQAWLRTELQRYPKLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            +L  +GF DA R        +++WDY   ++ +N G+RIDH++LSP       S  +D 
Sbjct: 180 AQLIELGFVDAFRRFEQPEKTFTWWDYRMMAFRRNAGLRIDHVLLSPALAETCTSCEVDR 239

Query: 244 KPRGWTKPSDHTPVIV 259
            PR W +PSDHTPV+ 
Sbjct: 240 TPRTWEQPSDHTPVVA 255


>gi|33863562|ref|NP_895122.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9313]
 gi|33641011|emb|CAE21469.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9313]
          Length = 279

 Score =  205 bits (521), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 89/272 (32%), Positives = 139/272 (51%), Gaps = 4/272 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSIR R+  + AW+K+  PD++CLQETK +D  FP E  ++  Y +   GQK
Sbjct: 1   MQIATWNVNSIRTRLDQVQAWLKDAQPDLLCLQETKVDDPLFPHEVFEAQGYQVHFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN----TQTLRIGNLYLPHGNPI 119
           +YNGVAI+S+    ++     G+  +                    +RI N Y+P+G+ +
Sbjct: 61  AYNGVAIVSRQPLEDVRRGFTGELPEDAEALQLGEQKRVISALVNNIRIVNAYVPNGSAL 120

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
            S KY  K+ W+    R+   + + +EPL   GD+NI  +  D ++P +       +   
Sbjct: 121 KSEKYPYKLEWLSCLNRYLCAQAKRDEPLCLVGDFNIALEARDIHHPELLTGGIMASELE 180

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R++  K+      D  R      + +S+WDY + +W +++G RIDHI L  E  S   S 
Sbjct: 181 REALLKVLGDRLHDVFRVFEPDANHWSWWDYRSGAWDRDQGWRIDHIYLCDELLSQARSC 240

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271
            I    RG  KPSDH PV V L+       ++
Sbjct: 241 VIHKHLRGHEKPSDHAPVSVDLNWTPTDDDEE 272


>gi|300823193|ref|ZP_07103326.1| exodeoxyribonuclease III [Escherichia coli MS 119-7]
 gi|331677629|ref|ZP_08378304.1| exodeoxyribonuclease III [Escherichia coli H591]
 gi|300524347|gb|EFK45416.1| exodeoxyribonuclease III [Escherichia coli MS 119-7]
 gi|331074089|gb|EGI45409.1| exodeoxyribonuclease III [Escherichia coli H591]
          Length = 272

 Score =  205 bits (521), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 78/268 (29%), Positives = 124/268 (46%), Gaps = 8/268 (2%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + +   ++N+N +RAR H L A ++++ PD+I LQETK  D  FP E +  L Y++   G
Sbjct: 3   ATMKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHG 62

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           QK + GVA+L+K  PI +    PGDD + Q R I A        + + N Y P G     
Sbjct: 63  QKGHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSPLGNVTVINGYFPQGESRDH 122

Query: 122 TK-YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDAC 174
              +  K  + +    +    L+ + P++  GD NI P         +     +      
Sbjct: 123 PIKFPAKAQFYQNLQNYLETELKRDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCS 182

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
           F  E R+   +L + G  D  R  +      +S++DY +  +  N+G+RID ++ S    
Sbjct: 183 FLPEEREWMDRLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLA 242

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSL 261
                  ID + R   KPSDH PV  + 
Sbjct: 243 ECCVETGIDYEIRSMEKPSDHAPVWATF 270


>gi|121611360|ref|YP_999167.1| exodeoxyribonuclease III Xth [Verminephrobacter eiseniae EF01-2]
 gi|121556000|gb|ABM60149.1| exodeoxyribonuclease III Xth [Verminephrobacter eiseniae EF01-2]
          Length = 258

 Score =  205 bits (521), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 89/257 (34%), Positives = 129/257 (50%), Gaps = 1/257 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+  R+  + AW+  N  D +CLQE K  D  FP   LQ+  Y     GQK
Sbjct: 1   MKIATWNVNSLSVRLPQVLAWLAANPVDALCLQELKLSDDKFPHAALQAAGYDAVALGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAILS+++   +V ++P    +          +     LR+ N Y  +G    S K
Sbjct: 61  TYNGVAILSRHRLNAVVRNIPDFGDEQARVIAATLDSPLGP-LRLLNGYFVNGQEPGSEK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W++         L     L+ AGD+N+ PQ  D Y+P         T   R  F
Sbjct: 120 FAYKLRWLQALQDMVRAELAAHPRLVLAGDFNVAPQDRDSYDPEGLRETIHHTSAERAHF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q L  +G  DA R        YS+WDY    + KN+G+RIDHI++S      + +  ID 
Sbjct: 180 QALLALGLADAFRMFEQPGKSYSWWDYRMLGFQKNRGLRIDHILVSAALRPAVSACMIDR 239

Query: 244 KPRGWTKPSDHTPVIVS 260
            PR   +PSDH PV+++
Sbjct: 240 APRKNPQPSDHAPVVLT 256


>gi|41410014|ref|NP_962850.1| hypothetical protein MAP3916c [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41398847|gb|AAS06466.1| XthA [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 272

 Score =  205 bits (521), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 78/271 (28%), Positives = 124/271 (45%), Gaps = 7/271 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSIR+R+  +  W+     D++ +QETK  D  FP      L Y +   G  
Sbjct: 1   MRLATWNVNSIRSRLPRVLDWLARTEVDVLAMQETKCADGQFPTLPFFELGYEVAHVGFN 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQAR-----FIEATFTINTQTLRIGNLYLPHGNP 118
            +NGVAI S+    ++     G                         +RI +LY+P+G  
Sbjct: 61  QWNGVAIASRVGLDDVRVGFEGQPSWSGKPEVAAAAEARALAATCAGVRIWSLYVPNGRA 120

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEE--PLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
           +    Y  K+ W+      A+  L  +    +  AGD+NI PQ  D ++   +      +
Sbjct: 121 VGDPHYAYKLDWLAALRDSAAAWLREDPAAQIALAGDWNIAPQDDDVWSMEFFAGATHVS 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
              R++F  + +  F D +R       +Y++WDY A  + K +G+RID I+ SP     +
Sbjct: 181 EPERRAFNAILDAQFADLVRPFAPGPGVYTYWDYTALRFPKRQGMRIDFILGSPALARRV 240

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDIPEPR 267
             A+ID + R     SDH PV+V +   EP 
Sbjct: 241 THAQIDREERKGKGASDHAPVLVDVSRDEPP 271


>gi|298487202|ref|ZP_07005251.1| Exodeoxyribonuclease III [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|298158226|gb|EFH99297.1| Exodeoxyribonuclease III [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
          Length = 270

 Score =  205 bits (521), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 90/270 (33%), Positives = 135/270 (50%), Gaps = 11/270 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +RAR H LAA I ++ PD+I LQETK  D+ FP   +++L YH+   GQK
Sbjct: 1   MKIVSFNINGLRARPHQLAALIDKHQPDVIGLQETKVSDEQFPHAEVEALGYHVHFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122
            + GVA+LS+  P+ +     GDD + Q RFI  T    N Q + I N Y P G      
Sbjct: 61  GHYGVALLSRNPPLALHKGFEGDDEESQKRFIWGTCADSNGQPVTIMNGYFPQGESRDHP 120

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175
            K+  K  + +            E+PLI  GD NI PQ        D     +      F
Sbjct: 121 TKFPAKQRFYENLQTLLESHFSNEQPLIVMGDVNISPQDCDIGIGADNAKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232
             E R+  ++L+N G  D+ R  +      +S++DY +  +     +G+RID IM S   
Sbjct: 181 LPEEREWMERLKNWGLVDSFRHLYPEVVDRFSWFDYRSRGFEDEPKRGLRIDLIMTSTGL 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
              + +A +D   RG  KPSDH P+ + L+
Sbjct: 241 QPRIKAAGVDYDLRGMEKPSDHAPIWLELN 270


>gi|254431951|ref|ZP_05045654.1| exodeoxyribonuclease III [Cyanobium sp. PCC 7001]
 gi|197626404|gb|EDY38963.1| exodeoxyribonuclease III [Cyanobium sp. PCC 7001]
          Length = 278

 Score =  205 bits (521), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 90/271 (33%), Positives = 141/271 (52%), Gaps = 4/271 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A+WNVNS+R R+  +  W+++  P+++CLQETK  D+ FP +  Q L Y     GQK
Sbjct: 1   MRLASWNVNSVRTRLEQVTTWLEQERPEVLCLQETKVADELFPHDAFQELGYATAISGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHL----PGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
           +YNGVAILS     ++        PGD    +    +   +     +R+ NLY+P+G+ +
Sbjct: 61  AYNGVAILSLLPLEDVRIGFEALLPGDAEAQELSTQKRVISALVDGVRVLNLYVPNGSAL 120

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
            S KY  K+ W+    R+ + + E  +PL   GD+NI P+  D ++P         +   
Sbjct: 121 RSEKYAYKLQWLACLRRYLAVQEEQGDPLCMLGDFNIGPEDRDLHDPDRLTGGIMASEAE 180

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           RQ+ ++      TDA R        +S+WDY   +W +++G RIDHI L     +     
Sbjct: 181 RQALREALGDRLTDAFRLFEPEAGHWSWWDYRTGAWDRDRGWRIDHIYLCDTLAACATGC 240

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQ 270
           RI    RG  +PSDH PV+V+L  PE   + 
Sbjct: 241 RIHKHTRGNVQPSDHAPVVVNLAWPEEDPED 271


>gi|158423021|ref|YP_001524313.1| exodeoxyribonuclease III protein [Azorhizobium caulinodans ORS 571]
 gi|158329910|dbj|BAF87395.1| exodeoxyribonuclease III protein [Azorhizobium caulinodans ORS 571]
          Length = 270

 Score =  205 bits (521), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 94/261 (36%), Positives = 146/261 (55%), Gaps = 3/261 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+NVN +  R+  L  W++++ PD+ CLQE K   + FP   L+   Y     GQK
Sbjct: 1   MRIATFNVNGVNGRLPPLLDWLRQSKPDVACLQELKAPHERFPAAELEQAGYGAVWLGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           ++NGVAIL++ +                              + IG LY P+GNP    K
Sbjct: 61  AWNGVAILARGEMPVETRRGL---PGDPDDIQSRYIEAAVGGVLIGCLYAPNGNPAPGAK 117

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +D K+ W++R   +++Q L+L+ P++ AGD+NI+P+  D Y P  W +DA F  EVR +F
Sbjct: 118 FDYKLRWLERLRNYSAQMLDLDLPMVLAGDFNIMPEERDVYAPERWRDDALFRPEVRAAF 177

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             L++ G+ DA+R  H    LY+FW Y  ++++++ G+RIDH++LSP     L SA +D 
Sbjct: 178 ADLRDDGWVDALRHLHPDARLYTFWKYLRNAFARDAGLRIDHLLLSPALAPRLVSAGVDR 237

Query: 244 KPRGWTKPSDHTPVIVSLDIP 264
             RG    SDH P  ++LD P
Sbjct: 238 AVRGRDHASDHAPAWITLDAP 258


>gi|51596420|ref|YP_070611.1| exonuclease III [Yersinia pseudotuberculosis IP 32953]
 gi|108807521|ref|YP_651437.1| exonuclease III [Yersinia pestis Antiqua]
 gi|108811797|ref|YP_647564.1| exonuclease III [Yersinia pestis Nepal516]
 gi|145598263|ref|YP_001162339.1| exonuclease III [Yersinia pestis Pestoides F]
 gi|149365909|ref|ZP_01887944.1| exodeoxyribonuclease III [Yersinia pestis CA88-4125]
 gi|153949149|ref|YP_001400949.1| exonuclease III [Yersinia pseudotuberculosis IP 31758]
 gi|161484800|ref|NP_669464.2| exonuclease III [Yersinia pestis KIM 10]
 gi|161511386|ref|NP_993308.2| exonuclease III [Yersinia pestis biovar Microtus str. 91001]
 gi|162420660|ref|YP_001606769.1| exonuclease III [Yersinia pestis Angola]
 gi|165927745|ref|ZP_02223577.1| exodeoxyribonuclease III [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165939329|ref|ZP_02227877.1| exodeoxyribonuclease III [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|166009140|ref|ZP_02230038.1| exodeoxyribonuclease III [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166210881|ref|ZP_02236916.1| exodeoxyribonuclease III [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167401408|ref|ZP_02306905.1| exodeoxyribonuclease III [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167420251|ref|ZP_02312004.1| exodeoxyribonuclease III [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167426574|ref|ZP_02318327.1| exodeoxyribonuclease III [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|167469881|ref|ZP_02334585.1| exodeoxyribonuclease III [Yersinia pestis FV-1]
 gi|170024319|ref|YP_001720824.1| exonuclease III [Yersinia pseudotuberculosis YPIII]
 gi|186895466|ref|YP_001872578.1| exonuclease III [Yersinia pseudotuberculosis PB1/+]
 gi|218929268|ref|YP_002347143.1| exonuclease III [Yersinia pestis CO92]
 gi|229894844|ref|ZP_04510024.1| exonuclease III [Yersinia pestis Pestoides A]
 gi|229897588|ref|ZP_04512744.1| exonuclease III [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229898233|ref|ZP_04513381.1| exonuclease III [Yersinia pestis biovar Orientalis str. India 195]
 gi|229902093|ref|ZP_04517214.1| exonuclease III [Yersinia pestis Nepal516]
 gi|270490729|ref|ZP_06207803.1| exodeoxyribonuclease III [Yersinia pestis KIM D27]
 gi|294503787|ref|YP_003567849.1| exodeoxyribonuclease III [Yersinia pestis Z176003]
 gi|51589702|emb|CAH21332.1| exodeoxyribonuclease III [Yersinia pseudotuberculosis IP 32953]
 gi|108775445|gb|ABG17964.1| Exodeoxyribonuclease III [Yersinia pestis Nepal516]
 gi|108779434|gb|ABG13492.1| Exodeoxyribonuclease III [Yersinia pestis Antiqua]
 gi|115347879|emb|CAL20799.1| exodeoxyribonuclease III [Yersinia pestis CO92]
 gi|145209959|gb|ABP39366.1| Exodeoxyribonuclease III [Yersinia pestis Pestoides F]
 gi|149292322|gb|EDM42396.1| exodeoxyribonuclease III [Yersinia pestis CA88-4125]
 gi|152960644|gb|ABS48105.1| exodeoxyribonuclease III [Yersinia pseudotuberculosis IP 31758]
 gi|162353475|gb|ABX87423.1| exodeoxyribonuclease III [Yersinia pestis Angola]
 gi|165912670|gb|EDR31299.1| exodeoxyribonuclease III [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|165920359|gb|EDR37636.1| exodeoxyribonuclease III [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165991695|gb|EDR43996.1| exodeoxyribonuclease III [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166208061|gb|EDR52541.1| exodeoxyribonuclease III [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166961946|gb|EDR57967.1| exodeoxyribonuclease III [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167049104|gb|EDR60512.1| exodeoxyribonuclease III [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167054450|gb|EDR64262.1| exodeoxyribonuclease III [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|169750853|gb|ACA68371.1| exodeoxyribonuclease III [Yersinia pseudotuberculosis YPIII]
 gi|186698492|gb|ACC89121.1| exodeoxyribonuclease III [Yersinia pseudotuberculosis PB1/+]
 gi|229680989|gb|EEO77084.1| exonuclease III [Yersinia pestis Nepal516]
 gi|229688799|gb|EEO80867.1| exonuclease III [Yersinia pestis biovar Orientalis str. India 195]
 gi|229693925|gb|EEO83974.1| exonuclease III [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229702317|gb|EEO90336.1| exonuclease III [Yersinia pestis Pestoides A]
 gi|262362092|gb|ACY58813.1| exodeoxyribonuclease III [Yersinia pestis D106004]
 gi|262365769|gb|ACY62326.1| exodeoxyribonuclease III [Yersinia pestis D182038]
 gi|270339233|gb|EFA50010.1| exodeoxyribonuclease III [Yersinia pestis KIM D27]
 gi|294354246|gb|ADE64587.1| exodeoxyribonuclease III [Yersinia pestis Z176003]
 gi|320015154|gb|ADV98725.1| exonuclease III [Yersinia pestis biovar Medievalis str. Harbin 35]
          Length = 268

 Score =  205 bits (521), Expect = 6e-51,   Method: Composition-based stats.
 Identities = 87/268 (32%), Positives = 131/268 (48%), Gaps = 8/268 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H LAA I+++ PD+I LQETK  D  FP E +    YH+   GQK
Sbjct: 1   MKFVSFNINGLRARPHQLAAIIEQHQPDVIGLQETKVHDDMFPLEDVSQHGYHVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            + GVA+L+K QP+ +    P D+ D Q R I A       TL + N Y P G       
Sbjct: 61  GHYGVALLTKEQPLAVRRGFPSDEEDAQRRIIMADLATPQGTLTVINGYFPQGESRDHPI 120

Query: 124 -YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
            +  K  +     R+  ++L  E  ++  GD NI P         D     +      F 
Sbjct: 121 KFPAKARFYADLQRYLEEQLSPEAQVLIMGDLNISPTDLDIGIGEDNRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+  ++LQN G  D  RA +   +  +S++DY +  + +N+G+RID ++ S    + 
Sbjct: 181 PEEREWLERLQNWGLVDTFRAANPDCNDHFSWFDYRSRGFDENRGLRIDLLLASQPLAAR 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             +  ID   RG  KPSDH PV     +
Sbjct: 241 CIATGIDYAIRGMEKPSDHAPVWSEFSL 268


>gi|189350943|ref|YP_001946571.1| exodeoxyribonuclease III [Burkholderia multivorans ATCC 17616]
 gi|189334965|dbj|BAG44035.1| exodeoxyribonuclease III [Burkholderia multivorans ATCC 17616]
          Length = 258

 Score =  205 bits (521), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 84/256 (32%), Positives = 133/256 (51%), Gaps = 1/256 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+  R  ++  W+ ++  D++CLQE K  D+ FP   L++  Y     GQK
Sbjct: 1   MKIATWNVNSLNVRKQHVLDWLAQSAVDVLCLQELKLPDEKFPRADLEAAGYRSWFAGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAIL++       + +  +    +         +    +RI + Y P+G  + S K
Sbjct: 61  TYNGVAILARDTLPFDESDVVRNIPGFEDTQQRV-IAVTIDGVRIVSAYFPNGQAVGSDK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W+     +    ++    L   GDYNI P+  D ++P  WE +   + + R  F
Sbjct: 120 FLYKMQWLDALHAWLRTEMQRYPKLALLGDYNIAPEDRDVHDPAKWEGENLVSPQERAHF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            KL  +GF DA R        +++WDY   ++ +N G+RIDHI+LSP       S  +D 
Sbjct: 180 AKLIELGFVDAFRRFEQPEKTFTWWDYRMFAFRRNAGLRIDHILLSPALAGSCTSCEVDR 239

Query: 244 KPRGWTKPSDHTPVIV 259
            PR W +PSDHTPV+ 
Sbjct: 240 VPRTWEQPSDHTPVVA 255


>gi|217977845|ref|YP_002361992.1| exodeoxyribonuclease III [Methylocella silvestris BL2]
 gi|217503221|gb|ACK50630.1| exodeoxyribonuclease III [Methylocella silvestris BL2]
          Length = 258

 Score =  205 bits (521), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 124/258 (48%), Positives = 166/258 (64%), Gaps = 1/258 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+R R  +L  ++KE  PD++CLQE K  D+ FP+  +++  Y+    GQK
Sbjct: 1   MQIATWNVNSVRQRTGHLLRYLKEQAPDVLCLQELKCVDEAFPWGEVEAAGYNAAVHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVAILSK  PIE+   LPGD  D  AR+IEA        +R+ ++YLP+GNP  + K
Sbjct: 61  GFNGVAILSK-APIEVKRGLPGDPTDEHARYIEAVIPHKQSVVRVASIYLPNGNPPDTEK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K++W+ R +  A + L LEEPL+ AGDYN+IP   DC +P  W  DA F  + R  F
Sbjct: 120 YGYKLAWMDRLIAHARELLRLEEPLVLAGDYNVIPAAADCADPAAWVGDALFLPQTRARF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + L N+G TDA+RAT D   LY+FWDY A +W +NKGIRIDH++LSP A   L +  ID 
Sbjct: 180 RTLLNLGLTDALRATTDEAGLYTFWDYQAGAWQRNKGIRIDHLLLSPGAADRLVTTTIDK 239

Query: 244 KPRGWTKPSDHTPVIVSL 261
             R   KPSDH PV + L
Sbjct: 240 GLRAEDKPSDHVPVRIEL 257


>gi|170019904|ref|YP_001724858.1| exonuclease III [Escherichia coli ATCC 8739]
 gi|253773296|ref|YP_003036127.1| exonuclease III [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
 gi|300818391|ref|ZP_07098601.1| exodeoxyribonuclease III [Escherichia coli MS 107-1]
 gi|300904608|ref|ZP_07122444.1| exodeoxyribonuclease III [Escherichia coli MS 84-1]
 gi|300924797|ref|ZP_07140737.1| exodeoxyribonuclease III [Escherichia coli MS 182-1]
 gi|300951354|ref|ZP_07165196.1| exodeoxyribonuclease III [Escherichia coli MS 116-1]
 gi|300958643|ref|ZP_07170767.1| exodeoxyribonuclease III [Escherichia coli MS 175-1]
 gi|301303958|ref|ZP_07210076.1| exodeoxyribonuclease III [Escherichia coli MS 124-1]
 gi|301327485|ref|ZP_07220718.1| exodeoxyribonuclease III [Escherichia coli MS 78-1]
 gi|301647945|ref|ZP_07247720.1| exodeoxyribonuclease III [Escherichia coli MS 146-1]
 gi|309793523|ref|ZP_07687950.1| exodeoxyribonuclease III [Escherichia coli MS 145-7]
 gi|331642351|ref|ZP_08343486.1| exodeoxyribonuclease III [Escherichia coli H736]
 gi|169754832|gb|ACA77531.1| exodeoxyribonuclease III [Escherichia coli ATCC 8739]
 gi|253324340|gb|ACT28942.1| exodeoxyribonuclease III [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|260449129|gb|ACX39551.1| exodeoxyribonuclease III [Escherichia coli DH1]
 gi|300314694|gb|EFJ64478.1| exodeoxyribonuclease III [Escherichia coli MS 175-1]
 gi|300403439|gb|EFJ86977.1| exodeoxyribonuclease III [Escherichia coli MS 84-1]
 gi|300419004|gb|EFK02315.1| exodeoxyribonuclease III [Escherichia coli MS 182-1]
 gi|300449344|gb|EFK12964.1| exodeoxyribonuclease III [Escherichia coli MS 116-1]
 gi|300529031|gb|EFK50093.1| exodeoxyribonuclease III [Escherichia coli MS 107-1]
 gi|300840755|gb|EFK68515.1| exodeoxyribonuclease III [Escherichia coli MS 124-1]
 gi|300845916|gb|EFK73676.1| exodeoxyribonuclease III [Escherichia coli MS 78-1]
 gi|301073916|gb|EFK88722.1| exodeoxyribonuclease III [Escherichia coli MS 146-1]
 gi|308123110|gb|EFO60372.1| exodeoxyribonuclease III [Escherichia coli MS 145-7]
 gi|315061052|gb|ADT75379.1| exonuclease III [Escherichia coli W]
 gi|315136390|dbj|BAJ43549.1| exonuclease III [Escherichia coli DH1]
 gi|315257443|gb|EFU37411.1| exodeoxyribonuclease III [Escherichia coli MS 85-1]
 gi|324016423|gb|EGB85642.1| exodeoxyribonuclease III [Escherichia coli MS 117-3]
 gi|331039149|gb|EGI11369.1| exodeoxyribonuclease III [Escherichia coli H736]
          Length = 272

 Score =  205 bits (521), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 78/268 (29%), Positives = 124/268 (46%), Gaps = 8/268 (2%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + +   ++N+N +RAR H L A ++++ PD+I LQETK  D  FP E +  L Y++   G
Sbjct: 3   ATMKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHG 62

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           QK + GVA+L+K  PI +    PGDD + Q R I A        + + N Y P G     
Sbjct: 63  QKGHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSLLGNVTVINGYFPQGESRDH 122

Query: 122 TK-YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDAC 174
              +  K  + +    +    L+ + P++  GD NI P         +     +      
Sbjct: 123 PIKFPAKAQFYQNLQNYLETELKRDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCS 182

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
           F  E R+   +L + G  D  R  +      +S++DY +  +  N+G+RID ++ S    
Sbjct: 183 FLPEEREWMDRLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLA 242

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSL 261
                  ID + R   KPSDH PV  + 
Sbjct: 243 ECCVETGIDYEIRSMEKPSDHAPVWATF 270


>gi|229591315|ref|YP_002873434.1| exonuclease III [Pseudomonas fluorescens SBW25]
 gi|229363181|emb|CAY50233.1| exodeoxyribonuclease III [Pseudomonas fluorescens SBW25]
          Length = 270

 Score =  205 bits (521), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 85/269 (31%), Positives = 132/269 (49%), Gaps = 11/269 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +RAR H LAA I+++ PD+I LQETK  D  FP   +Q+L YH+   GQK
Sbjct: 1   MKIVSFNINGLRARPHQLAALIEKHQPDVIGLQETKVHDDQFPLAEVQALGYHVYYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122
            + GVA+LS+   + +      D+ D Q RFI  TF   + Q + I N Y P G      
Sbjct: 61  GHYGVALLSRQPALSLHKGFASDEEDAQRRFIWGTFADEHGQPVTIMNGYFPQGESRDHP 120

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175
            K+  K  + +   +    +   ++ L+  GD NI P+        D     +      F
Sbjct: 121 TKFPAKQRFYEDLQQLLESQFSNDQALVVMGDVNISPEDCDIGIGADNAKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232
             E R+   +L+N G  D+ R  +      +S++DY +  +     +G+RID IM S   
Sbjct: 181 LPEEREWMARLKNWGLVDSFRHLNPDVVDRFSWFDYRSRGFEDEPKRGLRIDVIMASNGL 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
              +  A +D   RG  KPSDH P+ + L
Sbjct: 241 LPRVKDAGVDYDLRGLEKPSDHAPIWLEL 269


>gi|256393746|ref|YP_003115310.1| exodeoxyribonuclease III Xth [Catenulispora acidiphila DSM 44928]
 gi|256359972|gb|ACU73469.1| exodeoxyribonuclease III Xth [Catenulispora acidiphila DSM 44928]
          Length = 261

 Score =  205 bits (521), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 78/261 (29%), Positives = 120/261 (45%), Gaps = 1/261 (0%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           VV VATWNVNS+ AR+  L  W+    PD++CLQE KT D+ FP   L  + Y   T G 
Sbjct: 2   VVRVATWNVNSVTARVERLVGWLDSAKPDVVCLQELKTTDEAFPAGQLADVGYQAATWGT 61

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
             +NGVAILS+    ++    P            A        +R+  +Y+P+G  +   
Sbjct: 62  GRWNGVAILSRLPIADVWRGWPDLPDFDGVAEPRALTATCGG-VRVTCVYVPNGRELGHP 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
            +D K+ W+       ++    E P    GD+NI P   D ++  ++      T   R  
Sbjct: 121 HFDYKLRWLDSLTASVAEPARGELPYAVLGDFNIAPTDADVWDMSLFAESTHVTPAERAK 180

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
              L+  G  + +         Y++WDY   ++ KN G+RID +  +      +  A +D
Sbjct: 181 LADLEAQGLVEVLPRALKYDKPYTYWDYRQLAFPKNNGMRIDLVFGNAAFAGAVRDAYVD 240

Query: 243 TKPRGWTKPSDHTPVIVSLDI 263
            + R     SDH PV+V LD+
Sbjct: 241 REERKGKGASDHAPVVVDLDV 261


>gi|71735024|ref|YP_274825.1| exonuclease III [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|257487832|ref|ZP_05641873.1| exonuclease III [Pseudomonas syringae pv. tabaci ATCC 11528]
 gi|289625127|ref|ZP_06458081.1| exonuclease III [Pseudomonas syringae pv. aesculi str. NCPPB3681]
 gi|289648704|ref|ZP_06480047.1| exonuclease III [Pseudomonas syringae pv. aesculi str. 2250]
 gi|71555577|gb|AAZ34788.1| exodeoxyribonuclease III [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|320324615|gb|EFW80692.1| exonuclease III [Pseudomonas syringae pv. glycinea str. B076]
 gi|320328987|gb|EFW84986.1| exonuclease III [Pseudomonas syringae pv. glycinea str. race 4]
 gi|330867998|gb|EGH02707.1| exonuclease III [Pseudomonas syringae pv. aesculi str. 0893_23]
 gi|330880714|gb|EGH14863.1| exonuclease III [Pseudomonas syringae pv. glycinea str. race 4]
 gi|330985313|gb|EGH83416.1| exonuclease III [Pseudomonas syringae pv. lachrymans str. M301315]
 gi|331008544|gb|EGH88600.1| exonuclease III [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 270

 Score =  205 bits (521), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 90/270 (33%), Positives = 136/270 (50%), Gaps = 11/270 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +RAR H LAA I ++ PD+I LQETK  D+ FP   +++L YH+   GQK
Sbjct: 1   MKIVSFNINGLRARPHQLAALIDKHQPDVIGLQETKVSDEQFPHAEVEALGYHVHFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122
            + GVA+LS+  P+ +     GDD + Q RFI  T+   N Q + I N Y P G      
Sbjct: 61  GHYGVALLSRNPPLALHKGFEGDDEESQKRFIWGTYADSNGQPVTIMNGYFPQGESRDHP 120

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175
            K+  K  + +            E+PLI  GD NI PQ        D     +      F
Sbjct: 121 TKFPAKQRFYENLQTLLESHFSNEQPLIVMGDVNISPQDCDIGIGADNAKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232
             E R+  ++L+N G  D+ R  +      +S++DY +  +     +G+RID IM S   
Sbjct: 181 LPEEREWMERLKNWGLVDSFRHLYPEVVDRFSWFDYRSRGFEDEPKRGLRIDLIMTSTGL 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
              + +A +D   RG  KPSDH P+ + L+
Sbjct: 241 QPRIKAAGVDYDLRGMEKPSDHAPIWLELN 270


>gi|320086216|emb|CBY95990.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
          Length = 292

 Score =  205 bits (520), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 77/269 (28%), Positives = 122/269 (45%), Gaps = 8/269 (2%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
            +   ++N+N +RAR H L A ++++ PD+I LQETK  D+ FP E +  L Y++   GQ
Sbjct: 24  TMKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDEMFPLEEVAKLGYNVFYHGQ 83

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K + GVA+L+K  PI +    P D  + Q R I A        + + N Y P G      
Sbjct: 84  KGHYGVALLTKATPISVRRGFPDDGEEAQRRIIMAEIPSPLGNITVINGYFPQGESRDHP 143

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175
            K+  K  + +    +    L+ + P++  GD NI P         +     +      F
Sbjct: 144 LKFPAKAQFYQNLQNYLETELKCDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSF 203

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R+   +L   G  D  R  +      +S++DY +  +  N+G+RID ++ S     
Sbjct: 204 LPEEREWMSRLLKWGLVDTFREANPQTMDKFSWFDYRSKGFVDNRGLRIDLLLASAPLAE 263

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                 ID   R   KPSDH PV  +  +
Sbjct: 264 RCAETGIDYDIRSMEKPSDHAPVWATFRV 292


>gi|307153787|ref|YP_003889171.1| exodeoxyribonuclease III [Cyanothece sp. PCC 7822]
 gi|306984015|gb|ADN15896.1| exodeoxyribonuclease III [Cyanothece sp. PCC 7822]
          Length = 264

 Score =  205 bits (520), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 90/264 (34%), Positives = 130/264 (49%), Gaps = 6/264 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSIR R   ++ W++ N  D++CLQETK  D +FP    + L YH+   GQ 
Sbjct: 1   MKIATWNVNSIRIRQQQVSHWLQMNPVDVLCLQETKVIDADFPKMPFEELGYHLYISGQP 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT-----INTQTLRIGNLYLPHGNP 118
           SYNGVA+LS+    ++                               +RI NLY+P+G  
Sbjct: 61  SYNGVALLSRQPLEDVRIGFTQVLGVDDVLAATFDQQKRVISGIFHDVRIVNLYVPNGAD 120

Query: 119 ITSTKYDDK-ISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
           ++S KY  K              +    + L   GD+N+ P+  D +NP   E     T 
Sbjct: 121 LSSDKYAYKLQWLKMLRNYLTLFKENYPQELCVCGDFNVAPEDKDIHNPKGKETHIMATP 180

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
           + R++ Q++  +G  DA R        YS+WDY +  + +N+G RIDH  L+P+      
Sbjct: 181 QERKALQEVLEIGLKDAFRKFTAEGGHYSWWDYRSGGFQRNRGWRIDHHFLTPKLYEQAT 240

Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261
           S  ID +PR   KPSDHTPVIV  
Sbjct: 241 SCTIDIEPRKQEKPSDHTPVIVEF 264


>gi|170694716|ref|ZP_02885867.1| exodeoxyribonuclease III Xth [Burkholderia graminis C4D1M]
 gi|170140347|gb|EDT08524.1| exodeoxyribonuclease III Xth [Burkholderia graminis C4D1M]
          Length = 258

 Score =  205 bits (520), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 83/258 (32%), Positives = 128/258 (49%), Gaps = 1/258 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS++ R  ++  W++ +  D++CLQE K  D+ FP   L+   Y     GQK
Sbjct: 1   MKIATWNVNSLKVRQQHVIDWLETSGTDVLCLQELKLPDEKFPRAELEEKGYRSWFAGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGV IL +   + +       ++       +       + +RI + Y P+G    + K
Sbjct: 61  TYNGVGILVR-AGLNVDEASVVRNIPGFDDLQQRVVAATVEGVRIISAYFPNGQAPGTDK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W+     +    + L   L   GDYNI P   D ++P  WE     + E R  F
Sbjct: 120 FAYKLRWLAALHDWVKSEMALYPKLALLGDYNIAPDDRDVHDPKAWEGQNLVSPEERAEF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            +L  +G  DA R       +YS+WDY   ++ +N G+RIDHI+LS        S  +D 
Sbjct: 180 VRLIELGLVDAFRQFEQPEKIYSWWDYRMMAFRRNAGLRIDHILLSKALAETCASCEVDK 239

Query: 244 KPRGWTKPSDHTPVIVSL 261
            PR W +PSDH PV+  L
Sbjct: 240 VPRKWDQPSDHAPVVAQL 257


>gi|309812281|ref|ZP_07706036.1| exodeoxyribonuclease III [Dermacoccus sp. Ellin185]
 gi|308433586|gb|EFP57463.1| exodeoxyribonuclease III [Dermacoccus sp. Ellin185]
          Length = 262

 Score =  205 bits (520), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 80/262 (30%), Positives = 127/262 (48%), Gaps = 3/262 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSIR R+  + A+++  + D++ +QETK +D+ FP    +   Y +   G  
Sbjct: 1   MRIATWNVNSIRTRVDRVIAFLERGDVDVLAMQETKCKDEQFPMARFEEAGYEVAHHGLN 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT-LRIGNLYLPHGNPITST 122
            +NGVAI S+    ++                EA     T   +R+ +LY+P+G  I   
Sbjct: 61  QWNGVAIASRVGLEDVQIGFEDMPGFGDPIAAEARAIAATCDGVRMWSLYVPNGREIGHP 120

Query: 123 KYDDKISWIKRFLRFASQRL--ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
            Y+ K+ W+        + L    E  +   GD+NI P+  D ++P  +E     T   R
Sbjct: 121 HYEYKLDWLAALRADGEKWLTENPEAQIALTGDWNIAPRDEDVWDPAFFEGKTHVTQPER 180

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            +FQ + + G+ D +R   +    Y++WDY    + K +G+RID  + SP     +  A 
Sbjct: 181 DAFQAMIDTGYADVVRPHTNEPRTYTYWDYTQLRFPKKQGMRIDFALCSPALAGRVQGAV 240

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           ID   R     SDH PVIV LD
Sbjct: 241 IDRDERKGKGASDHAPVIVQLD 262


>gi|283785027|ref|YP_003364892.1| exodeoxyribonuclease III [Citrobacter rodentium ICC168]
 gi|282948481|emb|CBG88070.1| exodeoxyribonuclease III [Citrobacter rodentium ICC168]
          Length = 268

 Score =  205 bits (520), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 82/268 (30%), Positives = 124/268 (46%), Gaps = 8/268 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A ++++ PD+I LQETK  D  FP E +  L Y++   GQK
Sbjct: 1   MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEDVARLGYNVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122
            + GVA+L+K  PI +    P D  + Q R I A        + + N Y P G       
Sbjct: 61  GHYGVALLTKETPIAVRRGFPDDGEEAQRRIIMAELPSPLGNVTVINGYFPQGESRDHPL 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACFT 176
           K+  K  + +    +    L+ + P++  GD NI P   D           +      F 
Sbjct: 121 KFPAKAQFYQNLQNYLDSELKRDNPVLIMGDMNISPSDRDIGIGEENRRRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+   +L N G  D  R  H   +  +S++DY +  +  N+G+RID ++ S      
Sbjct: 181 PEEREWMDRLLNWGLVDTFRHAHPETNDKFSWFDYRSKGFDDNRGLRIDLLLASQPLAER 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                ID   RG  KPSDH PV    D+
Sbjct: 241 CVETGIDYAIRGMEKPSDHAPVWAKFDV 268


>gi|227885825|ref|ZP_04003630.1| exodeoxyribonuclease III [Escherichia coli 83972]
 gi|301050910|ref|ZP_07197761.1| exodeoxyribonuclease III [Escherichia coli MS 185-1]
 gi|26108407|gb|AAN80609.1|AE016761_184 Exodeoxyribonuclease III [Escherichia coli CFT073]
 gi|227837398|gb|EEJ47864.1| exodeoxyribonuclease III [Escherichia coli 83972]
 gi|300297429|gb|EFJ53814.1| exodeoxyribonuclease III [Escherichia coli MS 185-1]
 gi|307553768|gb|ADN46543.1| exodeoxyribonuclease III [Escherichia coli ABU 83972]
          Length = 272

 Score =  205 bits (520), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 79/268 (29%), Positives = 125/268 (46%), Gaps = 8/268 (2%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + +   ++N+N +RAR H L A ++++ PD+I LQETK  D  FP E +  L Y++   G
Sbjct: 3   ATMKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHG 62

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           QK + GVA+L+K  PI +    PGDD + Q R I A        + + N Y P G     
Sbjct: 63  QKGHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSPLGNVTVINGYFPQGESRDH 122

Query: 122 TK-YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDAC 174
              +  K  + +    +    L+ E P++  GD NI P         +     +      
Sbjct: 123 PIKFSAKAQFYQNLQNYLETELKRENPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCS 182

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
           F  E R+  ++L + G  D  R  +      +S++DY +  +  N+G+RID ++ S    
Sbjct: 183 FLPEEREWMERLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLA 242

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSL 261
                  ID + R   KPSDH PV  + 
Sbjct: 243 ECCVETGIDYEIRSMEKPSDHAPVWATF 270


>gi|301168642|emb|CBW28232.1| exonuclease III [Haemophilus influenzae 10810]
          Length = 267

 Score =  205 bits (520), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 81/267 (30%), Positives = 127/267 (47%), Gaps = 8/267 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A I++  PD+I LQE K  D+ FP+E  ++L YH+   GQK
Sbjct: 1   MKFISFNINGLRARPHQLEAIIEKYQPDVIGLQEIKVADEAFPYEITENLGYHVFHHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122
            + GVA+L+K +P  +    P D+ D Q R I A        L   N Y P G      T
Sbjct: 61  GHYGVALLTKQEPKVVRRGFPTDNEDAQKRIIMADLETEFGLLTAINGYFPQGESRAHET 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  +     ++  +  +   P++  GD NI P         +     +      F 
Sbjct: 121 KFPAKEKFYADLQQYLEKEHDKSNPILIMGDMNISPSDLDIGIGDENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R  +Q+L + G  D+ R  + T +  +S++DY +  +  N+G+RIDHI++S +    
Sbjct: 181 PEERAWYQRLYDYGLEDSFRKLNPTANDKFSWFDYRSKGFDDNRGLRIDHILVSQKLAER 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262
                I    R   KPSDH P+     
Sbjct: 241 CVDVGIALDIRAMEKPSDHAPIWAEFK 267


>gi|242239395|ref|YP_002987576.1| exodeoxyribonuclease III [Dickeya dadantii Ech703]
 gi|242131452|gb|ACS85754.1| exodeoxyribonuclease III [Dickeya dadantii Ech703]
          Length = 268

 Score =  205 bits (520), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 84/266 (31%), Positives = 125/266 (46%), Gaps = 8/266 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H LAA I+++ PD+I LQETK  D  FP E +    YH+   GQK
Sbjct: 1   MKFVSFNINGLRARPHQLAAVIEQHQPDVIGLQETKVHDDVFPLEDVAKFGYHVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122
            + GVA+L++  P+ +    P D+ D Q R I A       TL + N Y P G       
Sbjct: 61  GHYGVAMLTRNTPLAVRRGFPTDEEDAQRRIIMADLETPLGTLTVINGYFPQGESRDHPV 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  + +    +       E+P++  GD NI P         D     +      F 
Sbjct: 121 KFPAKTRFYQDLQHYLEHHHNAEQPVLIMGDMNISPTDLDIGIGEDSRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+   +LQ+ G  D  RA +      +S++DY +  +  N+G+RID I+ S    S 
Sbjct: 181 PEEREWMLRLQDWGLVDTFRAQNPECRDRFSWFDYRSSGFDDNRGLRIDLILASQPLASR 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
             +  ID   R   KPSDH P+    
Sbjct: 241 CSATGIDYAIRSMEKPSDHAPIWAEF 266


>gi|300930770|ref|ZP_07146143.1| exodeoxyribonuclease III [Escherichia coli MS 187-1]
 gi|300461403|gb|EFK24896.1| exodeoxyribonuclease III [Escherichia coli MS 187-1]
          Length = 272

 Score =  205 bits (520), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 78/268 (29%), Positives = 124/268 (46%), Gaps = 8/268 (2%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + +   ++N+N +RAR H L A ++++ PD+I LQETK  D  FP E +  L Y++   G
Sbjct: 3   ATMKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHG 62

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           QK + GVA+L+K  PI +    PGDD + Q R I A        + + N Y P G     
Sbjct: 63  QKGHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSLLGNVTVINGYFPQGESRDH 122

Query: 122 TK-YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDAC 174
              +  K  + +    +    L+ + P++  GD NI P         +     +      
Sbjct: 123 PIKFPAKAQFYQHLQNYLETELKRDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCS 182

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
           F  E R+   +L + G  D  R  +      +S++DY +  +  N+G+RID ++ S    
Sbjct: 183 FLPEEREWMDRLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLA 242

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSL 261
                  ID + R   KPSDH PV  + 
Sbjct: 243 ECCVETGIDYEIRSMEKPSDHAPVWATF 270


>gi|307729190|ref|YP_003906414.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1003]
 gi|307583725|gb|ADN57123.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1003]
          Length = 258

 Score =  205 bits (520), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 84/258 (32%), Positives = 128/258 (49%), Gaps = 1/258 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS++ R  ++  W++ +  D++CLQE K  D+ FP   L+   Y     GQK
Sbjct: 1   MKIATWNVNSLKVRQQHVIDWLETSRTDVLCLQELKLPDEKFPRAELEEKGYRSWFAGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGV IL + + I +       ++       +         +RI + Y P+G    + K
Sbjct: 61  TYNGVGILVR-EGISVDETTIVRNIPGFDDLQQRVVAATVDGVRIISAYFPNGQAPGTDK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W+     +    + L   L   GDYNI P   D ++P  WE     + E R  F
Sbjct: 120 FAYKLRWLAALHDWVQSEMALYPKLALLGDYNIAPDDRDVHDPKAWEGQNLVSPEERAEF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            +L  +G  DA R       +YS+WDY   ++ +N G+RIDHI+LS        S  +D 
Sbjct: 180 VRLTELGLVDAFRQFEQPEKIYSWWDYRMMAFRRNAGLRIDHILLSKPLAETCTSCEVDK 239

Query: 244 KPRGWTKPSDHTPVIVSL 261
            PR W +PSDH PV+  L
Sbjct: 240 VPRKWDQPSDHAPVVAQL 257


>gi|254228998|ref|ZP_04922419.1| exodeoxyribonuclease III [Vibrio sp. Ex25]
 gi|262394738|ref|YP_003286592.1| exodeoxyribonuclease III [Vibrio sp. Ex25]
 gi|151938466|gb|EDN57303.1| exodeoxyribonuclease III [Vibrio sp. Ex25]
 gi|262338332|gb|ACY52127.1| exodeoxyribonuclease III [Vibrio sp. Ex25]
          Length = 268

 Score =  205 bits (520), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 78/268 (29%), Positives = 133/268 (49%), Gaps = 9/268 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V ++N+N +RAR+H L A I ++ PD+I LQE K  D+ FP E ++++ Y +   GQK
Sbjct: 1   MKVISFNINGLRARLHQLQALIDKHQPDVIGLQEIKVHDEAFPIEAVEAMGYKVYFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121
           ++ GVA+L K +P+ +    P  ++   +   +      N + + + N Y P G+ I+  
Sbjct: 61  AHYGVAMLCKQEPLHVQKGFPTDNEEHQKRMIMATFLNENGEKVTVLNGYFPQGDNISHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175
           TK+  K  + K  + + +     +E LI  GD NI P               +      F
Sbjct: 121 TKFPYKRQFYKDLMTYLNDHHNSDEQLIVMGDINISPIDADIGIGEPNRKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R+  + L + GF D  R  +   +  +S++DY +  +  N+G+RID I+ +P    
Sbjct: 181 QPEEREWLKTLLDWGFEDTFRKLYPEVNDQFSWFDYRSRGFDDNRGLRIDVILATPSLAQ 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
               + ID + RG  KPSDH P+  +  
Sbjct: 241 KCIDSGIDYELRGIEKPSDHAPIWSTFK 268


>gi|261493298|ref|ZP_05989824.1| exodeoxyribonuclease III [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261496564|ref|ZP_05992944.1| exodeoxyribonuclease III [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261307767|gb|EEY09090.1| exodeoxyribonuclease III [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261310942|gb|EEY12119.1| exodeoxyribonuclease III [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 291

 Score =  205 bits (520), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 84/267 (31%), Positives = 130/267 (48%), Gaps = 8/267 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A I+++ PD++ LQE K  D++FP++ +  L YH+   GQK
Sbjct: 25  MKFISFNINGLRARPHQLEAIIEKHQPDVLGLQEIKVADEDFPYDLVNHLGYHVFHHGQK 84

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122
            + GVA+L+K +PI +    P D LD Q R I A    +   L + N Y P G   +  T
Sbjct: 85  GHYGVALLTKKEPIAVRKGFPTDVLDAQKRMIMADIETDFGVLTVLNGYFPQGENRSHET 144

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  +      +    L+ E P+I  GD NI P               + +    F 
Sbjct: 145 KFPAKQKFYADLQNYLESELKPENPIIIMGDMNISPTDLDIGIGEPNRKRWLRDGKCSFL 204

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+   +L + G  D  RA +   +  +S++DY +  +  N+G+RID I+ S      
Sbjct: 205 PEEREWLDRLYSYGLVDTFRAGNPDVNDKFSWFDYRSKGFDDNRGLRIDLILASKSLAER 264

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262
                ID   R   KPSDH+PV  +  
Sbjct: 265 CVETGIDLDIRAMEKPSDHSPVWATFK 291


>gi|307329665|ref|ZP_07608823.1| exodeoxyribonuclease III Xth [Streptomyces violaceusniger Tu 4113]
 gi|306884723|gb|EFN15751.1| exodeoxyribonuclease III Xth [Streptomyces violaceusniger Tu 4113]
          Length = 259

 Score =  205 bits (520), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 74/260 (28%), Positives = 128/260 (49%), Gaps = 1/260 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSI AR+  L AW++ +  D++C+QETK  +  FP+E L+ L Y        
Sbjct: 1   MRIATWNVNSITARLPRLLAWLESSGTDVLCVQETKCAESAFPYEPLRELGYEAAVNATG 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVA++SK    ++   LPG       +   A        +R+ ++Y+P+G  I    
Sbjct: 61  RWNGVALVSKAGLTDVTVGLPGGPDYDGDQEPRAIGATCGP-VRLWSVYVPNGREIGHPH 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           YD K+ W++      +     + P    GD+N+ P   D ++   ++     T   R++ 
Sbjct: 120 YDYKLRWLEALRTAVAGDAAGDRPFAVLGDFNVAPTDEDVWDRSAFDGLTHVTDLEREAL 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             L+  G +D +         +++WDY    + KN+G+RID +  +      +  A +D 
Sbjct: 180 AALREAGLSDVVPRPLKYDRPFTYWDYRELGFPKNRGMRIDLVYGNEVFAKAVGDAYVDR 239

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
           + R     SDH PV+V L++
Sbjct: 240 EERKGKGASDHAPVVVDLEV 259


>gi|327480794|gb|AEA84104.1| exonuclease III [Pseudomonas stutzeri DSM 4166]
          Length = 270

 Score =  205 bits (520), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 83/269 (30%), Positives = 131/269 (48%), Gaps = 11/269 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +RAR H L+A I ++ PD+I LQETK  D+ FP   +++L YH+   GQK
Sbjct: 1   MKIVSFNINGLRARPHQLSAIIDKHQPDVIGLQETKVADEQFPQAEIEALGYHVHYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122
            + GVA+LS+  P+E+    P D  + Q RFI   F   N Q + + N Y P G      
Sbjct: 61  GHYGVALLSRQAPLEVHKGFPSDGEESQKRFIWGRFADANGQPVTVMNGYFPQGESRAHP 120

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175
            K+  K  +         QR   +E L   GD+NI PQ  D           +      F
Sbjct: 121 VKFPAKTKFYADLQALLEQRFSPDESLALMGDFNISPQDCDIGIGEVNAKRWLRTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKN--KGIRIDHIMLSPEA 232
             E R+  ++++  G  D+ R  +      +S++DY +  +     +G+RID+I+ +   
Sbjct: 181 LPEEREWLERIKGWGLQDSFRTLNPKVVDRFSWFDYRSRGFEDEPRRGLRIDYILTTHAL 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
              +    +D   R   KPSDH PV + L
Sbjct: 241 HERVTDCGVDYDIRAMEKPSDHCPVWIEL 269


>gi|91225244|ref|ZP_01260412.1| exodeoxyribonuclease III [Vibrio alginolyticus 12G01]
 gi|91189883|gb|EAS76155.1| exodeoxyribonuclease III [Vibrio alginolyticus 12G01]
          Length = 268

 Score =  205 bits (520), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 78/268 (29%), Positives = 133/268 (49%), Gaps = 9/268 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V ++N+N +RAR+H L A I ++ PD+I LQE K  D+ FP E ++++ Y +   GQK
Sbjct: 1   MKVISFNINGLRARLHQLQALIDKHQPDVIGLQEIKVHDEAFPIEAVEAMGYKVYFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121
           ++ GVA+L K +P+ +    P  ++   +   +      N + + + N Y P G+ I+  
Sbjct: 61  AHYGVAMLCKQEPLHVQKGFPTDNEEHQKRMIMATFLNENGEKVTVLNGYFPQGDNISHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175
           TK+  K  + K  + + +     +E LI  GD NI P               +      F
Sbjct: 121 TKFPYKRQFYKDLMTYLNDHHNNDEQLIVMGDINISPIDADIGIGEPNRKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R+  + L + GF D  R  +   +  +S++DY +  +  N+G+RID I+ +P    
Sbjct: 181 QPEEREWLKTLLDWGFVDTFRKLYPEVNDQFSWFDYRSRGFDDNRGLRIDVILATPSLAE 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
               + ID + RG  KPSDH P+  +  
Sbjct: 241 KCIESGIDYELRGIEKPSDHAPIWSTFK 268


>gi|323526639|ref|YP_004228792.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1001]
 gi|323383641|gb|ADX55732.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1001]
          Length = 259

 Score =  205 bits (520), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 81/258 (31%), Positives = 127/258 (49%), Gaps = 1/258 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS++ R  ++  W++ +  D++CLQE K  D+ FP   L+   Y     GQK
Sbjct: 1   MKIATWNVNSLKVRQQHVIDWLETSRTDVLCLQELKLPDEKFPRAELEEKGYRSWFAGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGV IL +   + +       ++       +         +R+ + Y P+G    + K
Sbjct: 61  TYNGVGILVREG-LSVDEASVVRNIPGFEDLQQRVVAATVDGVRVISAYFPNGQAPGTDK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W+     +    + L   L   GDYNI P   D ++P  WE     + E R  F
Sbjct: 120 FAYKLRWLAALHDWVRSEMALYPKLALLGDYNIAPDDRDVHDPKAWEGQNLVSPEERAEF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            +L  +G  DA R       +YS+WDY   ++ +N G+RIDHI+LS        S  +D 
Sbjct: 180 VRLTELGLVDAFRQFDQPEKIYSWWDYRMMAFRRNAGLRIDHILLSKPLAETCTSCEVDK 239

Query: 244 KPRGWTKPSDHTPVIVSL 261
            PR W +PSDH PV+  +
Sbjct: 240 VPRKWDQPSDHAPVVAQI 257


>gi|152984142|ref|YP_001348052.1| exonuclease III [Pseudomonas aeruginosa PA7]
 gi|150959300|gb|ABR81325.1| exodeoxyribonuclease III [Pseudomonas aeruginosa PA7]
          Length = 270

 Score =  205 bits (520), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 88/269 (32%), Positives = 129/269 (47%), Gaps = 11/269 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +RAR H LAA I+ + PD+I LQETK  D  FP   +++L YH+   GQK
Sbjct: 1   MKIVSFNINGLRARPHQLAALIERHQPDVIGLQETKVADDQFPQAEIEALGYHVHYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122
            + GVA+LS+  P+E+    P D  + Q RFI  TF       L + N Y P G      
Sbjct: 61  GHYGVALLSRQAPLELHRGFPSDGEESQRRFIWGTFADAQGNPLTVMNGYFPQGENRDHP 120

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175
            K+  K  +            + E+ L+  GD NI P+  D           +      F
Sbjct: 121 TKFPAKQRFYADLQLLLENSFKPEQALVVMGDINISPEDCDIGIGEENRKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232
             E R+    L+N G  D+ RA +      +S++DY +  +     +G+RID I+ S   
Sbjct: 181 LPEEREWLATLKNWGLVDSFRALNPEVTDRFSWFDYRSRGFEDTPKRGLRIDVILASRAL 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
            S    A ID   RG  KPSDH P+ + L
Sbjct: 241 QSRFRDAGIDYDLRGMEKPSDHAPIWLEL 269


>gi|114321929|ref|YP_743612.1| exodeoxyribonuclease III [Alkalilimnicola ehrlichii MLHE-1]
 gi|114228323|gb|ABI58122.1| Exodeoxyribonuclease III [Alkalilimnicola ehrlichii MLHE-1]
          Length = 258

 Score =  205 bits (520), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 84/262 (32%), Positives = 138/262 (52%), Gaps = 5/262 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A+WNVNS++ R+  +  W++   PD++ LQETK  D+ FP E L    Y +   GQ 
Sbjct: 1   MKLASWNVNSLKVRLPQVLDWLESRQPDLVGLQETKLTDERFPAEALNEAGYQVAYAGQP 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVA+L++ +  E V        D Q R +  T       LR  NLY+P+G+ + S K
Sbjct: 61  TYNGVAVLARGRAPEAVIRDIPGLDDPQRRVLGVTVG----DLRFINLYVPNGSEVGSEK 116

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF-TLEVRQS 182
           Y  K+ W+ R   + ++     + L+  GD+NI P   D ++P +W       T E    
Sbjct: 117 YAYKLDWLARLADWLAEERRRHDKLVVVGDFNIAPDDRDVHDPELWREKVLCSTPEREAL 176

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
            +    +G TD  R       ++S+WDY  +++ +N+G+RID ++ SP       S+ +D
Sbjct: 177 RRLTGELGLTDTFRLFDQPEKVWSWWDYRMNNFKRNRGLRIDLVLASPALYQACTSSYVD 236

Query: 243 TKPRGWTKPSDHTPVIVSLDIP 264
            +PR W +PSDH P +   ++ 
Sbjct: 237 REPRTWERPSDHAPAVAEFNLD 258


>gi|33593125|ref|NP_880769.1| putative exodeoxyribonuclease III [Bordetella pertussis Tohama I]
 gi|33563500|emb|CAE42388.1| putative exodeoxyribonuclease III [Bordetella pertussis Tohama I]
          Length = 260

 Score =  205 bits (520), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 87/261 (33%), Positives = 130/261 (49%), Gaps = 1/261 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+  R+  +  W+  N  D +C+QE K  D  FP +      YH    GQK
Sbjct: 1   MKLATWNVNSLNVRLPQVLDWLAANPVDALCIQELKLTDDKFPLDAFTEAGYHAAWAGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAI+S+     +V + P    D Q R +  T       +R+   Y P+G  + S K
Sbjct: 61  TYNGVAIISREPGFALVRNNP-RYEDPQQRILAVTLPSPAGDVRVICAYCPNGQSVDSDK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K++W      +  + +     L   GDYN+ P   D +NP  WE     +   R +F
Sbjct: 120 YVYKLAWFDGLRDWLEEEMRTYPRLAILGDYNVAPADADVHNPEKWEGQVLVSEPERAAF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + L ++G TD+ R        +S+WDY   ++ +N G+RIDH++LS        +  ID 
Sbjct: 180 RALLDLGLTDSFRLFEQPEKSFSWWDYRQFAFRRNAGLRIDHVLLSDALKPHCVACVIDK 239

Query: 244 KPRGWTKPSDHTPVIVSLDIP 264
            PR   +PSDH PVI +L   
Sbjct: 240 APRANEQPSDHAPVIATLAFD 260


>gi|332187206|ref|ZP_08388946.1| exodeoxyribonuclease III [Sphingomonas sp. S17]
 gi|332012906|gb|EGI54971.1| exodeoxyribonuclease III [Sphingomonas sp. S17]
          Length = 257

 Score =  205 bits (520), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 101/259 (38%), Positives = 152/259 (58%), Gaps = 5/259 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + T+NVN I+AR+  L  ++ E + DI+CLQE K  D+ FP   +++  Y     GQK
Sbjct: 1   MKITTYNVNGIKARLPRLLEYLAEADADIVCLQELKASDETFPVADIEAAGYGAVWHGQK 60

Query: 64  SYNGVAILSKY-QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           S+NGVA+L++  QP+E    L G+D D  +R++E         L + +LYLP+GNP    
Sbjct: 61  SWNGVAVLARGAQPVERQRGLAGEDEDEHSRYLECEVNG----LVVASLYLPNGNPQPGP 116

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           K+D K+ W++R    A + L  E P + AGDYN+IP   D ++     +DA    E RQ+
Sbjct: 117 KFDYKLRWMERLAARARELLAEEVPAVLAGDYNVIPNDDDTFSVPAMASDALMQPESRQA 176

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           +++L   G+TD++R       +++FWDY A SW ++ G RIDH++LSP+A   L  A +D
Sbjct: 177 YRRLLTQGWTDSVRTRAPKGGVWTFWDYQAGSWQRDAGFRIDHLLLSPQAADRLVDAGVD 236

Query: 243 TKPRGWTKPSDHTPVIVSL 261
              RG  K SDH P  V L
Sbjct: 237 KSYRGREKASDHAPTWVRL 255


>gi|300994386|ref|ZP_07180891.1| exodeoxyribonuclease III [Escherichia coli MS 45-1]
 gi|300406232|gb|EFJ89770.1| exodeoxyribonuclease III [Escherichia coli MS 45-1]
 gi|315290452|gb|EFU49827.1| exodeoxyribonuclease III [Escherichia coli MS 153-1]
          Length = 272

 Score =  205 bits (520), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 79/268 (29%), Positives = 125/268 (46%), Gaps = 8/268 (2%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + +   ++N+N +RAR H L A ++++ PD+I LQETK  D  FP E +  L Y++   G
Sbjct: 3   ATMKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHG 62

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           QK + GVA+L+K  PI +    PGDD + Q R I A        + + N Y P G     
Sbjct: 63  QKGHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSPLGNVTVINGYFPQGESRDH 122

Query: 122 TK-YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDAC 174
              +  K  + +    +    L+ E P++  GD NI P         +     +      
Sbjct: 123 PIKFSAKAQFYQNLHNYLETELKRENPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCS 182

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
           F  E R+  ++L + G  D  R  +      +S++DY +  +  N+G+RID ++ S    
Sbjct: 183 FLPEEREWMERLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLA 242

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSL 261
                  ID + R   KPSDH PV  + 
Sbjct: 243 ECCVETGIDYEIRSMEKPSDHAPVWATF 270


>gi|118472074|ref|YP_885233.1| exodeoxyribonuclease III [Mycobacterium smegmatis str. MC2 155]
 gi|118173361|gb|ABK74257.1| exodeoxyribonuclease III [Mycobacterium smegmatis str. MC2 155]
          Length = 260

 Score =  205 bits (520), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 79/261 (30%), Positives = 121/261 (46%), Gaps = 3/261 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + VATWNVNSIRAR+  +  W+   + D++ +QETK  D  FP      L Y +   G  
Sbjct: 1   MRVATWNVNSIRARVDRVTDWLARADVDVLAMQETKCSDDKFPAMPFVELGYEVAYHGLN 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVAI S+     +            A    A        +R+ +LY+P+G  + S  
Sbjct: 61  QWNGVAIASRVGLENVQLGFDNQPAWEAAAEARALAATCG-GVRVWSLYVPNGRTVDSPH 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIF--AGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
           Y  K+ W+      A + L  +        GD+NI P   D ++   +      T + R 
Sbjct: 120 YAYKLEWLAALRDNAQKWLADDPQAQIALTGDWNIAPTDEDVWDIDFFAGSTHVTEKERA 179

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           +FQ + +  F D +R       +Y++WDY    + K +G+RID I+ SP     +  A I
Sbjct: 180 AFQAIVDAQFADVVRPFAPGPGVYTYWDYTQLRFPKRQGMRIDFILGSPAFAQRVGHAEI 239

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
             + R    PSDH PV+V L+
Sbjct: 240 VREERKGKSPSDHAPVLVELN 260


>gi|261401182|ref|ZP_05987307.1| exodeoxyribonuclease III [Neisseria lactamica ATCC 23970]
 gi|269208860|gb|EEZ75315.1| exodeoxyribonuclease III [Neisseria lactamica ATCC 23970]
          Length = 256

 Score =  205 bits (520), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 91/260 (35%), Positives = 132/260 (50%), Gaps = 4/260 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + TWNVNS+  R+  +   + +N PDI+ LQE K +   FP   LQ + +H    GQK
Sbjct: 1   MKITTWNVNSLNVRLPQVQNLLADNPPDILVLQELKLDQDKFPAAALQMMGWHCVWSGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAI+S+  P ++   LP    D Q R I AT       +R+ N+Y  +G  + S K
Sbjct: 61  TYNGVAIVSRNAPEDVHFGLPSLPDDPQRRVIAATVGG----VRVINVYCVNGEALDSPK 116

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K  W      F    +     L+  GD+NI P   DCY+P  W      +   RQ F
Sbjct: 117 FKYKEQWFAALTEFVRDEMTRYGKLVLLGDFNIAPADADCYDPKKWYEKIHCSSVERQWF 176

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q L ++G TD++R  H     Y+++DY    + +  G+RIDHI++SP     L   R+D 
Sbjct: 177 QNLLDLGLTDSLRQVHPEGAFYTWFDYRGAMFQRKLGLRIDHILVSPAMAEALKDVRVDL 236

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
             R   +PSDH PV    D 
Sbjct: 237 DTRALERPSDHAPVTAEFDW 256


>gi|226304979|ref|YP_002764937.1| exodeoxyribonuclease III [Rhodococcus erythropolis PR4]
 gi|226184094|dbj|BAH32198.1| putative exodeoxyribonuclease III [Rhodococcus erythropolis PR4]
          Length = 266

 Score =  205 bits (520), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 75/265 (28%), Positives = 125/265 (47%), Gaps = 7/265 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+RAR   +  W+  ++ D++ +QETK +D+ FP+E  + + Y +   G  
Sbjct: 1   MRIATWNVNSVRARTDRIIDWLGRSDVDVLAMQETKCKDEQFPYERFKEIGYEVAHVGLS 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARF-----IEATFTINTQTLRIGNLYLPHGNP 118
            +NGVAI S+    ++           +                   +R+ +LY+P+G  
Sbjct: 61  QWNGVAIASRVGLDDVQIGFEDQPGFDKDPEADPVREARAIGATCGGVRVWSLYVPNGRE 120

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIF--AGDYNIIPQPHDCYNPIIWENDACFT 176
           +    Y  K+ W+ +    A   L+ +        GD+N+ P   D ++P  +E     +
Sbjct: 121 LEDPHYAYKLDWLAKLRDDAEGWLKQDPDAQIALVGDWNVAPTDDDVWDPAFFEGKTHTS 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
              R +F      GF D +R       +Y++WDY    + K +G+RID I+ SP   + +
Sbjct: 181 EPERAAFTAFTESGFADVVRPYTPGPGVYTYWDYTQLRFPKKQGMRIDFILGSPAFAARV 240

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSL 261
            +A ID   R     SDH PVIV L
Sbjct: 241 EAAEIDRNERKGKGASDHAPVIVKL 265


>gi|238894275|ref|YP_002919009.1| exonuclease III [Klebsiella pneumoniae NTUH-K2044]
 gi|238546591|dbj|BAH62942.1| exonuclease III [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
          Length = 272

 Score =  205 bits (520), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 82/268 (30%), Positives = 127/268 (47%), Gaps = 8/268 (2%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + +   ++N+N +RAR H LAA ++++ PD+I LQETK  D  FP E +  L Y++   G
Sbjct: 3   ATMKFVSFNINGLRARPHQLAAIVEKHQPDVIGLQETKVHDDMFPLEEVARLGYNVFYHG 62

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           QK + GVA+L+K  PI +    P D  + Q R I A        + + N Y P G     
Sbjct: 63  QKGHYGVALLTKETPIAVRRGFPDDGEEAQRRIIMAEIPSPFGNVTVINGYFPQGESRDH 122

Query: 122 -TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDAC 174
            TK+  K ++ +    +    L  E P++  GD NI P         +     +      
Sbjct: 123 ETKFPAKAAFYQNLQNYLETELNKENPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCS 182

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHH-LYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
           F  E R+   +L   G  D  R  +  +H  +S++DY +  +  N+G+RID ++ S    
Sbjct: 183 FLPEEREWMDRLLGWGLVDTWRQANPDNHEHFSWFDYRSKGFDDNRGLRIDLLLASQPLA 242

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSL 261
                  ID + RG  KPSDH PV  + 
Sbjct: 243 QRCVETGIDYEIRGMEKPSDHAPVWATF 270


>gi|33866339|ref|NP_897898.1| exodeoxyribonuclease III [Synechococcus sp. WH 8102]
 gi|33639314|emb|CAE08322.1| exodeoxyribonuclease III [Synechococcus sp. WH 8102]
          Length = 278

 Score =  204 bits (519), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 87/265 (32%), Positives = 138/265 (52%), Gaps = 4/265 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+R R+  +  W+++  PD++CLQETK +D  FP +  ++  + +   GQK
Sbjct: 1   MRIATWNVNSVRTRLEQVLCWLEQTKPDLLCLQETKVDDPLFPMQAFENAGWQVSIHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARF----IEATFTINTQTLRIGNLYLPHGNPI 119
           SYNGVA++S+    ++     G+  D              +     +R+ NLY+P+G+ +
Sbjct: 61  SYNGVALVSREPLEDVRCGFVGELPDDAEAATLGEQRRVISGLLDGVRVLNLYVPNGSSL 120

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
           +S KY  K++W+    R+   + E  EPL   GD+NI  +  D ++P         +   
Sbjct: 121 SSEKYPYKLTWLGCLKRYLDAQAERGEPLCMVGDFNIALEARDIHDPDRLSGSVMASDAE 180

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R + ++       DA R        +S+WDY   +W +++G RIDHI L  E   L  S 
Sbjct: 181 RDALREALGNRLQDAFRMFEPDAGHWSWWDYRTGAWDRDRGWRIDHIYLCEELMGLARSC 240

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIP 264
            I  + RG  +PSDH PV V LD P
Sbjct: 241 SIHKQLRGNVQPSDHAPVSVDLDWP 265


>gi|269967644|ref|ZP_06181694.1| exodeoxyribonuclease III [Vibrio alginolyticus 40B]
 gi|269827731|gb|EEZ82015.1| exodeoxyribonuclease III [Vibrio alginolyticus 40B]
          Length = 268

 Score =  204 bits (519), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 78/268 (29%), Positives = 133/268 (49%), Gaps = 9/268 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V ++N+N +RAR+H L A I ++ PD+I LQE K  D+ FP E ++++ Y +   GQK
Sbjct: 1   MKVISFNINGLRARLHQLQALIDKHQPDVIGLQEIKVHDEAFPIEAVEAMGYKVYFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121
           ++ GVA+L K +P+ +    P  ++   +   +      N + + + N Y P G+ I+  
Sbjct: 61  AHYGVAMLCKQEPLHVQKGFPTDNEEHQKRMIMATFLNENGEKVTVLNGYFPQGDNISHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175
           TK+  K  + K  + + +     +E LI  GD NI P               +      F
Sbjct: 121 TKFPYKRQFYKDLMTYLNDHHNNDEQLIVMGDINISPIDADIGIGEPNRKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R+  + L + GF D  R  +   +  +S++DY +  +  N+G+RID I+ +P    
Sbjct: 181 QPEEREWLKALLDWGFVDTFRKLYPEVNDQFSWFDYRSRGFDDNRGLRIDVILATPSLAE 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
               + ID + RG  KPSDH P+  +  
Sbjct: 241 KCIESGIDYELRGIEKPSDHAPIWSTFK 268


>gi|229493724|ref|ZP_04387508.1| exodeoxyribonuclease III [Rhodococcus erythropolis SK121]
 gi|229319393|gb|EEN85230.1| exodeoxyribonuclease III [Rhodococcus erythropolis SK121]
          Length = 266

 Score =  204 bits (519), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 75/265 (28%), Positives = 126/265 (47%), Gaps = 7/265 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+RAR   +  W+  ++ D++ +QETK +D+ FP+E  + + Y +   G  
Sbjct: 1   MRIATWNVNSVRARTDRIIDWLGRSDVDVLAMQETKCKDEQFPYERFKEIGYEVAHVGLS 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARF-----IEATFTINTQTLRIGNLYLPHGNP 118
            +NGVAI S+    ++           +                   +R+ +LY+P+G  
Sbjct: 61  QWNGVAIASRVGLDDVQIGFEDQPGFDKDPEADPVREARAIGATCGGVRVWSLYVPNGRE 120

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIF--AGDYNIIPQPHDCYNPIIWENDACFT 176
           +    Y  K+ W+ +    A   L+ +        GD+N+ P   D ++P  +E     +
Sbjct: 121 LEDPHYAYKLDWLAKLRDDAEGWLKQDPDAQIALVGDWNVAPTDDDVWDPAFFEGKTHTS 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
              R +F      GF D +R       +Y++WDY    + K +G+RID I+ SP   + +
Sbjct: 181 EPERAAFTAFTESGFADVVRPYTPGPGVYTYWDYTQLRFPKKQGMRIDFILGSPAFAARV 240

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSL 261
            +A ID   R     SDH PVIV+L
Sbjct: 241 EAAEIDRNERKGKGASDHAPVIVNL 265


>gi|307130940|ref|YP_003882956.1| exonuclease III [Dickeya dadantii 3937]
 gi|306528469|gb|ADM98399.1| exonuclease III [Dickeya dadantii 3937]
          Length = 268

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 86/266 (32%), Positives = 131/266 (49%), Gaps = 8/266 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H LAA I+++ PD+I LQETK  D  FP + ++   YH+   GQK
Sbjct: 1   MKFVSFNINGLRARPHQLAAIIEQHQPDVIGLQETKVHDDMFPLDEVKQFGYHVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122
            + GVA+L+K +P+ +    P D+ D Q R I A       TL + N Y P G       
Sbjct: 61  GHYGVALLTKAEPLAVRRGFPTDEEDAQRRIIMADLATPLGTLTVVNGYFPQGESRDHAV 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  + +    +  Q  + ++P++  GD NI P         D     +      F 
Sbjct: 121 KFPAKTRFYQDLQHYLEQHHQADQPVLIMGDMNISPTDLDIGIGEDNRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+  ++L+N G  D  RA +      +S++DY +  +  N+G+RID IM +    S 
Sbjct: 181 PEEREWMERLKNWGLVDTFRAANPECQDRFSWFDYRSAGFDDNRGLRIDLIMATAPLASR 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
             +  ID   RG  KPSDH PV    
Sbjct: 241 CAATGIDYAIRGMEKPSDHAPVWAEF 266


>gi|170733499|ref|YP_001765446.1| exodeoxyribonuclease III Xth [Burkholderia cenocepacia MC0-3]
 gi|169816741|gb|ACA91324.1| exodeoxyribonuclease III Xth [Burkholderia cenocepacia MC0-3]
          Length = 258

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 84/256 (32%), Positives = 131/256 (51%), Gaps = 1/256 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+  R  ++  W+ ++  D++CLQE K  D+ FP   L++  Y     GQK
Sbjct: 1   MKIATWNVNSLNVRKQHVLDWLAQSGTDVLCLQELKLPDEKFPRADLEAAGYRSWFTGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAIL +   +   + +  +                   +RI + Y P+G  + S K
Sbjct: 61  TYNGVAILVRDTLVVDESDVVRNIPGFDDPQQRVIAATVDG-VRIVSAYFPNGQALDSDK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W+     +    L+    L   GDYNI P+  D ++P  WE     + + R  F
Sbjct: 120 FVYKMQWLDALQAWLRTELQRYPKLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            +L  +GF DA R        +++WDY   ++ +N G+RIDHI+LSP   +   S  +D 
Sbjct: 180 AQLIELGFVDAFRRFEQPEKTFTWWDYRMMAFRRNAGLRIDHILLSPALAATCASCEVDR 239

Query: 244 KPRGWTKPSDHTPVIV 259
            PR W +PSDHTPV+ 
Sbjct: 240 TPRTWEQPSDHTPVVA 255


>gi|186474317|ref|YP_001861659.1| exodeoxyribonuclease III Xth [Burkholderia phymatum STM815]
 gi|184196649|gb|ACC74613.1| exodeoxyribonuclease III Xth [Burkholderia phymatum STM815]
          Length = 308

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 104/261 (39%), Positives = 152/261 (58%), Gaps = 5/261 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+N+N IR+R+  L  W++   PD++CLQE K  D  FP   L    Y     GQ 
Sbjct: 1   MKLATFNINGIRSRLPALLQWLEREAPDVVCLQELKAPDSGFPEAELNRAGYGAIWHGQV 60

Query: 64  SYNGVAILSKY-QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           S+NGVAIL+K  QP+E    LPGD  D  +R+IEA        + IG LYLP+GNP    
Sbjct: 61  SWNGVAILAKDAQPVETRRGLPGDPDDTHSRYIEAAVEG----ILIGCLYLPNGNPQPGP 116

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           K+D K++W +R + +A + L+   P++ AGDYN++P   D YNP  W  DA    E R  
Sbjct: 117 KFDYKLAWFERLIVYAKRLLDSGHPVVLAGDYNVVPTDFDIYNPRSWLKDALLQPESRAC 176

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           + +L + G+TDA+R       +++FWDY+   W +N G+RIDH++L+    +++  A +D
Sbjct: 177 YARLLDQGWTDALRTRFPDEQIFTFWDYFRQHWERNSGLRIDHLLLNRPVAAMMRDAGVD 236

Query: 243 TKPRGWTKPSDHTPVIVSLDI 263
              RG    SDH P  V LD+
Sbjct: 237 RWVRGEPHASDHAPAWVELDL 257


>gi|107101992|ref|ZP_01365910.1| hypothetical protein PaerPA_01003039 [Pseudomonas aeruginosa PACS2]
          Length = 270

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 87/269 (32%), Positives = 130/269 (48%), Gaps = 11/269 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +RAR H LAA I+ + PD+I LQETK  D  FP   +++L YH+   GQK
Sbjct: 1   MKIVSFNINGLRARPHQLAALIERHQPDVIGLQETKVADDQFPQAEIEALGYHVHYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122
            + GVA+LS+  P+E+    P D  + Q RFI  TF       + + N Y P G      
Sbjct: 61  GHYGVALLSRQAPLELHRGFPSDGEESQRRFIWGTFSDAQGNPITVMNGYFPQGENREHP 120

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175
            K+  K  +            + E+ L+  GD NI P+  D           +      F
Sbjct: 121 TKFPAKQRFYADLQSLLENSFKPEQALVVMGDINISPEDCDIGIGEENRKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKN--KGIRIDHIMLSPEA 232
             E R+    L+N G  D+ RA +   +  +S++DY +  +  N  +G+RID I+ S   
Sbjct: 181 LPEEREWLATLKNWGLVDSFRALNPEVNDRFSWFDYRSRGFEDNPKRGLRIDVILASRVL 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
            S    A ID   R   KPSDH P+ + L
Sbjct: 241 QSRFKDAGIDYDLRSMEKPSDHAPIWLEL 269


>gi|68248592|ref|YP_247704.1| exonuclease III [Haemophilus influenzae 86-028NP]
 gi|68056791|gb|AAX87044.1| exodeoxyribonuclease III [Haemophilus influenzae 86-028NP]
          Length = 267

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 82/267 (30%), Positives = 128/267 (47%), Gaps = 8/267 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A I++  PD+I LQE K  D+ FP+E  ++L YH+   GQK
Sbjct: 1   MKFISFNINGLRARPHQLEAIIEKYQPDVIGLQEIKVADEAFPYEITENLGYHVFHHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122
            + GVA+L+K +P  I    P D+ D Q R I A        L + N Y P G      T
Sbjct: 61  GHYGVALLTKQEPKVIRRGFPTDNEDAQKRIIMADLETEFGLLTVINGYFPQGESRAHET 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  +     ++  +  +   P++  GD NI P         +     +      F 
Sbjct: 121 KFPAKEKFYADLQQYLEKEHDRSNPILIMGDMNISPSDLDIGIGDENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R  +Q+L + G  D+ R  + T +  +S++DY +  +  N+G+RIDHI++S +    
Sbjct: 181 PEERAWYQRLYDYGLEDSFRKLNPTANDKFSWFDYRSKGFDDNRGLRIDHILISQKLAER 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262
                I    R   KPSDH P+     
Sbjct: 241 CVDVGIALDIRAMEKPSDHAPIWAEFK 267


>gi|226358180|ref|YP_002787919.1| Exodeoxyribonuclease III [Deinococcus deserti VCD115]
 gi|226319823|gb|ACO47817.1| putative Exodeoxyribonuclease III [Deinococcus deserti VCD115]
          Length = 270

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 82/258 (31%), Positives = 133/258 (51%), Gaps = 5/258 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+  R+  + AW++   PD++ LQETK  D  FP   L++L Y     GQK
Sbjct: 1   MKLATWNVNSLNVRLGQVMAWLEAQQPDVLALQETKLPDDRFPVAELEALGYRAVFSGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           SYNGVA+LS+    ++   +PG D + +         +    L +     P+G  + S K
Sbjct: 61  SYNGVALLSRLPLEDVQIGIPGLDDEQRRVVAATVGGMRVVCLYV-----PNGQAVDSPK 115

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W+     +    L     L   GD+N+ P+  D ++P  W      +   RQ+F
Sbjct: 116 YTYKLEWLSAVRAWLQLELMAHPRLAVVGDFNVAPEDRDVHSPKRWAGQVLVSEPERQAF 175

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + L ++G  DA R       ++S+W+Y    + +N G+RIDH+++S    +   S  +D 
Sbjct: 176 RALLDLGLHDAFRLHPQPERVFSWWNYGRLGFPRNWGLRIDHVLVSGILAAECQSCTVDL 235

Query: 244 KPRGWTKPSDHTPVIVSL 261
           +PR   +PSDH PV+ + 
Sbjct: 236 EPRRHERPSDHAPVVATF 253


>gi|296102796|ref|YP_003612942.1| exonuclease III [Enterobacter cloacae subsp. cloacae ATCC 13047]
 gi|295057255|gb|ADF61993.1| exonuclease III [Enterobacter cloacae subsp. cloacae ATCC 13047]
          Length = 268

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 79/268 (29%), Positives = 124/268 (46%), Gaps = 8/268 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A ++++ PD+I LQETK  D  FP E +  L Y++   GQK
Sbjct: 1   MKFVSFNINGLRARPHQLEAIVEQHQPDVIGLQETKVHDDMFPLEEVVKLGYNVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122
            + GVA+L+K  P+ +    PGD  + Q R I A        + + N Y P G      T
Sbjct: 61  GHYGVALLTKETPVSVRRGFPGDGEEAQRRIIMAEIPSALGNITVINGYFPQGESRDHET 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  + +    + +  L+ E P++  GD NI P         +     +      F 
Sbjct: 121 KFPAKAKFYQDLQDYLTTELKKENPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+   +L + G  D  R  +      +S++DY +  +  N+G+RID ++ S      
Sbjct: 181 PEEREWMDRLLSWGLVDTFRTANPDTQDRFSWFDYRSKGFDDNRGLRIDLLLASSPLAER 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                ID   R   KPSDH PV     +
Sbjct: 241 CIETGIDYDIRSMEKPSDHAPVWAKFKL 268


>gi|206580746|ref|YP_002239049.1| exodeoxyribonuclease III [Klebsiella pneumoniae 342]
 gi|206569804|gb|ACI11580.1| exodeoxyribonuclease III [Klebsiella pneumoniae 342]
          Length = 268

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 81/266 (30%), Positives = 124/266 (46%), Gaps = 8/266 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H LAA ++++ PD+I LQETK  D  FP E +  L Y++   GQK
Sbjct: 1   MKFVSFNINGLRARPHQLAAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122
            + GVA+L+K  PI +    P D  + Q R I A        + + N Y P G      T
Sbjct: 61  GHYGVALLTKETPIAVRRGFPDDGEEAQRRIIMAEIPSPFGNVTVINGYFPQGESRDHET 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K ++ +    +    L  E P++  GD NI P         +     +      F 
Sbjct: 121 KFPAKAAFYQNLQNYLETELNKENPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+   +L   G  D  R  +      +S++DY +  +  N+G+RID ++ S      
Sbjct: 181 PEEREWMDRLLGWGLVDTWRQANPDNQEHFSWFDYRSKGFDDNRGLRIDLLLASQPLAQR 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
                ID + RG  KPSDH PV  + 
Sbjct: 241 CVETGIDYEIRGMEKPSDHAPVWATF 266


>gi|238754917|ref|ZP_04616267.1| Exodeoxyribonuclease III [Yersinia ruckeri ATCC 29473]
 gi|238706928|gb|EEP99295.1| Exodeoxyribonuclease III [Yersinia ruckeri ATCC 29473]
          Length = 268

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 88/268 (32%), Positives = 129/268 (48%), Gaps = 8/268 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H LAA I+++ PD+I LQETK  D  FP E +    YH+   GQK
Sbjct: 1   MKFVSFNINGLRARPHQLAAIIEQHQPDVIGLQETKVHDDMFPLEEVSQHGYHVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122
            + GVA+L+K +P+ +    P D+ D Q R I A       TL + N Y P G       
Sbjct: 61  GHYGVALLTKQKPLAVRRGFPTDEEDAQRRIIMADLATPQGTLTVINGYFPQGESRDHPT 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACFT 176
           K+  K  + +    + +Q L  E  ++  GD NI P         D     +      F 
Sbjct: 121 KFPAKARFYQDLQNYLAQELTPEAQVLIMGDINISPTDRDIGIGEDNRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+  ++LQN G  D  RA +      YS++DY +  + +N+G+RID +M S      
Sbjct: 181 PEEREWLERLQNWGLVDTFRAANPDCEDRYSWFDYRSRGFDENRGLRIDVLMASKPLAER 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             +  ID   R   KPSDH PV     +
Sbjct: 241 CIATGIDYDIRSMEKPSDHAPVWSEFSL 268


>gi|239814966|ref|YP_002943876.1| exodeoxyribonuclease III Xth [Variovorax paradoxus S110]
 gi|239801543|gb|ACS18610.1| exodeoxyribonuclease III Xth [Variovorax paradoxus S110]
          Length = 260

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 102/263 (38%), Positives = 154/263 (58%), Gaps = 5/263 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+NVN I +R+  + +W+ E  PD+ CLQE K+ D+NFP   ++   Y +   GQ+
Sbjct: 1   MKIATFNVNGINSRLALVLSWLAEARPDVACLQELKSPDENFPAAAIREAGYGVLFHGQR 60

Query: 64  SYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           ++NGVAIL++  +PIE    L G+  D Q+R++EA        + +G LYLP+GNP    
Sbjct: 61  AWNGVAILARGREPIETGRGLDGNSEDSQSRYLEAVVNG----VIVGCLYLPNGNPQPGP 116

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           K+D K+ W +R    A        P + AGD+N++P   D YNP  W++DA    E R +
Sbjct: 117 KFDYKLEWFERLNAHARLLYGCGMPAVLAGDFNVVPTDADIYNPASWQDDALLQPESRAA 176

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F +L   G+TDAIR  H    +Y++WDY+ + W +N G+RIDH++L+ E    L  A +D
Sbjct: 177 FARLLKQGWTDAIRTRHPREAIYTYWDYWRNRWPRNAGLRIDHLLLNRELAPFLADANVD 236

Query: 243 TKPRGWTKPSDHTPVIVSLDIPE 265
            + RG    SDH P    LD+P 
Sbjct: 237 REVRGRPGASDHAPAWALLDLPA 259


>gi|206560581|ref|YP_002231346.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           cenocepacia J2315]
 gi|198036623|emb|CAR52521.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           cenocepacia J2315]
          Length = 258

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 85/256 (33%), Positives = 133/256 (51%), Gaps = 1/256 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+  R  ++  W+ ++  D++CLQE K  D+ FP   L++  Y     GQK
Sbjct: 1   MKIATWNVNSLNVRKQHVLDWLAQSGTDVLCLQELKLPDEKFPRADLEAAGYRSWFTGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAIL++   +   + +  +                   +RI + Y P+G  + S K
Sbjct: 61  TYNGVAILARDTLVVDESDVVRNIPGFDDPQQRVIAATVDG-VRIVSAYFPNGQALDSDK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W+     +    L+    L   GDYNI P+  D ++P  WE     + + R  F
Sbjct: 120 FVYKMQWLDALQAWLRTELQRYPKLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            +L  +GF DA R        +++WDY   ++ +N G+RIDHI+LSPE  +   S  +D 
Sbjct: 180 AQLIELGFVDAFRRFEQPEKTFTWWDYRMMAFRRNAGLRIDHILLSPELAATCASCEVDR 239

Query: 244 KPRGWTKPSDHTPVIV 259
            PR W +PSDHTPV+ 
Sbjct: 240 TPRTWEQPSDHTPVVA 255


>gi|146307459|ref|YP_001187924.1| exonuclease III [Pseudomonas mendocina ymp]
 gi|145575660|gb|ABP85192.1| Exodeoxyribonuclease III [Pseudomonas mendocina ymp]
          Length = 270

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 85/269 (31%), Positives = 133/269 (49%), Gaps = 11/269 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +RAR H L A I ++ PD+I LQETK  D+ FP   ++ L YH+   GQK
Sbjct: 1   MKIVSFNINGLRARPHQLEALIAKHQPDVIGLQETKVADEQFPESEIRQLGYHVHYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122
            + GVA+LS+ +P+ +    P D  + Q RFI  TF   +   + + N Y P G      
Sbjct: 61  GHYGVALLSRQEPLNLQKGFPNDGEESQRRFIYGTFADAHGNPVTVMNGYFPQGESRDHP 120

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175
            K+  K  +     +   +R + ++ L+  GD NI P+  D           +      F
Sbjct: 121 VKFPAKQRFYADLQQLLVERFDPQQALVVMGDINISPEDCDIGIGEANRLRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232
             E R+    L+N G  D+ R  + T +  +S++DY +  +     +G+RID I+ S   
Sbjct: 181 LPEEREWLATLKNWGLVDSFRHLNPTVNDRFSWFDYRSRGFEDEPKRGLRIDVILASQAL 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
              L  A ID   RG  KPSDH P+ + L
Sbjct: 241 QGRLKDAGIDYDLRGMDKPSDHAPIWLEL 269


>gi|213967028|ref|ZP_03395178.1| exodeoxyribonuclease III [Pseudomonas syringae pv. tomato T1]
 gi|301385213|ref|ZP_07233631.1| exonuclease III [Pseudomonas syringae pv. tomato Max13]
 gi|302059606|ref|ZP_07251147.1| exonuclease III [Pseudomonas syringae pv. tomato K40]
 gi|302130154|ref|ZP_07256144.1| exonuclease III [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|213928350|gb|EEB61895.1| exodeoxyribonuclease III [Pseudomonas syringae pv. tomato T1]
          Length = 270

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 89/269 (33%), Positives = 135/269 (50%), Gaps = 11/269 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +RAR H LAA I ++ PD+I LQETK  D+ FP   +++L YH+   GQK
Sbjct: 1   MKIVSFNINGLRARPHQLAALIDKHQPDVIGLQETKVSDEQFPLADVEALGYHVHFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122
            + GVA+LS+  P+ +      DD + Q RFI  T+   N Q + I N Y P G      
Sbjct: 61  GHYGVALLSRNPPLALHKGFESDDEESQKRFIWGTYADSNGQPVTIMNGYFPQGESRDHP 120

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175
            K+  K  + +        +   E+PLI  GD NI PQ        D     +      F
Sbjct: 121 TKFPAKQRFYENLQALLEGQFSNEQPLIVMGDVNISPQDCDIGIGADNAKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232
             E R+  ++L+N G  D+ R  +      +S++DY +  +     +G+RID IM S   
Sbjct: 181 LPEEREWMERLKNWGLVDSFRYLYPEVSDRFSWFDYRSRGFEDEPKRGLRIDLIMTSTGL 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
              + +A +D   RG  KPSDH P+ + L
Sbjct: 241 QPRIKAAGVDYDLRGMEKPSDHAPIWLEL 269


>gi|283457216|ref|YP_003361786.1| exonuclease III [Rothia mucilaginosa DY-18]
 gi|283133201|dbj|BAI63966.1| exonuclease III [Rothia mucilaginosa DY-18]
          Length = 309

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 71/264 (26%), Positives = 124/264 (46%), Gaps = 6/264 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+NSIRAR + +  W+ E++ D++ LQETKT+D+ FPF+  + + Y +   G  
Sbjct: 44  MKIATWNINSIRARENRVEDWLDEHDVDVLALQETKTKDETFPFDLFEFMGYEVAHFGLN 103

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIE----ATFTINTQTLRIGNLYLPHGNPI 119
            +NGVAI S+    ++           +    E             +R+ +LY+P+G  +
Sbjct: 104 QWNGVAIASRVGLEDVQRGFDNQPHFGKPGEPEVLEARAIGATCGGVRVWSLYVPNGRGL 163

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL 177
           T    D K+ W++   +     L           GD+N+ P+  D ++   +  +    +
Sbjct: 164 TDPHMDYKLHWMEALRQNVHNELAANPQSQLALVGDWNVAPEDADVWDIDYFLRNEMTHV 223

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
              +       +           T   Y++WDY A  ++K++G+RID  + SP   + + 
Sbjct: 224 SEPERCAFAALLEEGMVDVVRPHTPGEYTYWDYQAGRFTKDEGMRIDFQLFSPALAARVE 283

Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261
            A ID   R     SDHTPV+V +
Sbjct: 284 RAWIDKVERAGEGASDHTPVVVEI 307


>gi|156973843|ref|YP_001444750.1| exonuclease III [Vibrio harveyi ATCC BAA-1116]
 gi|156525437|gb|ABU70523.1| hypothetical protein VIBHAR_01553 [Vibrio harveyi ATCC BAA-1116]
          Length = 268

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 81/267 (30%), Positives = 133/267 (49%), Gaps = 9/267 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V ++N+N +RAR+H L A I ++ PD+I LQE K  D+ FP E ++++ Y +   GQK
Sbjct: 1   MKVISFNINGLRARLHQLQALIDKHQPDVIGLQEIKVHDEAFPIEDVEAMGYKVYFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121
           ++ GVA+L K +PI +    P  ++   +   +      N + + + N Y P G+ I   
Sbjct: 61  AHYGVAMLCKQEPISVQKGFPTDNEEHQKRMIMATFEDENGEKVTVLNGYFPQGDNIAHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175
           TKY  K  + K  + + +     +E LI  GD NI P               +      F
Sbjct: 121 TKYPYKRQFYKDLMTYLNDHHTNDEQLIVMGDINISPIDSDIGIGEPNRKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R+  + L + GF D  R  H   +  +S++DY +  +  N+G+RID I+++P    
Sbjct: 181 QPEEREWLKTLLDWGFEDTFRNLHPEVNDRFSWFDYRSRGFDDNRGLRIDVILVTPSLAK 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261
               + ID + RG  KPSDH P+  + 
Sbjct: 241 KCVESDIDYELRGIEKPSDHAPIWSTF 267


>gi|327188747|gb|EGE55945.1| exodeoxyribonuclease III protein [Rhizobium etli CNPAF512]
          Length = 263

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 117/262 (44%), Positives = 167/262 (63%), Gaps = 5/262 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+NVN I  R+  L  W+KE+ PD++CLQE KT+D  FP +  +   Y     GQ+
Sbjct: 1   MKIATYNVNGINGRLDILLRWLKEDAPDVVCLQELKTDDAKFPRKETERAGYGAVWHGQR 60

Query: 64  SYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           S+NGVAIL+K   PI     LPGD  D  +R+IEA        + IG+LYLP+GNP  S 
Sbjct: 61  SWNGVAILAKGKTPILTRRGLPGDPDDTHSRYIEAAVDG----VLIGSLYLPNGNPFPSA 116

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           K++ K+ W +R   +A++ LE+E P I AGD+N++P   D Y P  W +DA F  EVR++
Sbjct: 117 KFEYKLRWFRRLSAYAAELLEIEVPSILAGDFNVMPTEIDVYKPERWLDDALFRPEVRKA 176

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           + +L   G+TDA+R  H    +Y+FW Y+ +S+ ++ G+RIDH++LSP     L SAR+ 
Sbjct: 177 YAQLVAQGWTDAVRHLHPGERIYTFWKYWRNSFERDAGLRIDHLLLSPTVAPWLRSARVR 236

Query: 243 TKPRGWTKPSDHTPVIVSLDIP 264
            KPRGW   SDH PV++ LDIP
Sbjct: 237 RKPRGWEHTSDHAPVMIELDIP 258


>gi|218768830|ref|YP_002343342.1| exodeoxyribonuclease III [Neisseria meningitidis Z2491]
 gi|121052838|emb|CAM09187.1| exodeoxyribonuclease III [Neisseria meningitidis Z2491]
          Length = 256

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 90/260 (34%), Positives = 132/260 (50%), Gaps = 4/260 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + TWNVNS+  R+  +   + +N PDI+ LQE K +   FP   LQ + +H    GQK
Sbjct: 1   MKITTWNVNSLNVRLPQVQNLLADNPPDILVLQELKLDQDKFPAAALQMMGWHCVWSGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAI+S+  P ++   LP    D Q R I AT       +R+ N+Y  +G  + S K
Sbjct: 61  TYNGVAIVSRNAPEDVHIGLPALPDDPQRRVIAATVGG----VRVINVYCVNGEALDSPK 116

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K  W      F    +     L+  GD+NI P   DCY+P  W      +   RQ F
Sbjct: 117 FKYKEQWFAALTEFVRDEMARHGKLVLLGDFNIAPADADCYDPEKWHEKIHCSSVERQWF 176

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q L ++G  D++R  H     Y+++DY    + +  G+RIDHI++SP     L   R+D 
Sbjct: 177 QNLLDLGLADSLRQVHPEGAFYTWFDYRGAMFQRKLGLRIDHILVSPAMAEALKDVRVDL 236

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
           + R   +PSDH PV    D 
Sbjct: 237 ETRALERPSDHAPVTAEFDW 256


>gi|330428202|gb|AEC19536.1| putative exodeoxyribonuclease III [Pusillimonas sp. T7-7]
          Length = 262

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 91/259 (35%), Positives = 137/259 (52%), Gaps = 1/259 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS++ R+  +  W++ +  + +CLQE K  D  FP +      Y     GQK
Sbjct: 1   MKLATWNVNSLKVRLPQVLDWLENSPVEALCLQELKLTDDKFPIDAFTEAGYQACWAGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAI++K    +I  +LPG + D Q R I  T       +R+   Y P+G  + S K
Sbjct: 61  TYNGVAIITKVPGTDIQRNLPGFE-DHQQRIIATTLPSPVGDVRVICAYCPNGQAVGSDK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y+ K+ W      +  Q L+    L   GDYN+ P   D ++P  WE D   +   R +F
Sbjct: 120 YEYKLKWFLALQEWLEQELQRYPRLAILGDYNVAPHNDDVHDPKKWEGDVLVSEPERAAF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             L ++G TD+ R        +++WDY   ++ +N G+RIDH++LS        +  ID 
Sbjct: 180 NALLSLGLTDSFREFEQEEKSFTWWDYRRFAFRRNAGLRIDHVLLSDALKPYCSACVIDK 239

Query: 244 KPRGWTKPSDHTPVIVSLD 262
            PR   +PSDHTPVI +LD
Sbjct: 240 APRNNEQPSDHTPVIATLD 258


>gi|224823708|ref|ZP_03696817.1| exodeoxyribonuclease III Xth [Lutiella nitroferrum 2002]
 gi|224604163|gb|EEG10337.1| exodeoxyribonuclease III Xth [Lutiella nitroferrum 2002]
          Length = 257

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 87/260 (33%), Positives = 139/260 (53%), Gaps = 7/260 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS++ R+  +  W+ E   D++CLQE K +   FP   +++  Y     GQK
Sbjct: 1   MRLATWNVNSLKVRLPQVLQWLAETPVDVLCLQELKMDQDAFPLAEIEAAGYRAAWLGQK 60

Query: 64  SYNGVAILSKYQP--IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +YNGVAIL +      ++V  +PG D + +              +R+   Y  +G  + S
Sbjct: 61  TYNGVAILVRDGHSLDDVVPGIPGYDDEQRRVIAATVGG-----VRVICAYFVNGEAVDS 115

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            KY  K++W+    R+ +  L     L   GDYNI P   D Y+P  W++    ++  R 
Sbjct: 116 PKYPYKLAWLAELERYVADELTRHPSLALLGDYNIAPDDRDVYDPDAWKDKVLCSVPERD 175

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           +F++L  +G +D+ R  +     YS+WDY A  + +N G+RIDHI++S    +      I
Sbjct: 176 AFRRLIGLGLSDSFRLFNQDEKQYSWWDYRAMMFRRNLGLRIDHILISDALKARATECVI 235

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
           D  PR W +PSDHTPV+++L
Sbjct: 236 DKAPRKWERPSDHTPVVLTL 255


>gi|220911407|ref|YP_002486716.1| exodeoxyribonuclease III Xth [Arthrobacter chlorophenolicus A6]
 gi|219858285|gb|ACL38627.1| exodeoxyribonuclease III Xth [Arthrobacter chlorophenolicus A6]
          Length = 268

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 73/266 (27%), Positives = 120/266 (45%), Gaps = 8/266 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+RAR   + AW++ ++ D++ +QETK +D NFP+E  + + Y +   G  
Sbjct: 1   MKIATWNVNSLRARADRVEAWLQRSDCDVLAIQETKCKDDNFPWELFERMGYEVAHFGVN 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLD----VQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            +NGVAI S+    ++                              +RI +LY+P+G  +
Sbjct: 61  QWNGVAIASRVGLEDVERTFLDQPAFGKAGKDPVQEARAMAATCGGVRIWSLYIPNGRSL 120

Query: 120 TSTKYDD--KISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP--IIWENDACF 175
                    K     +    +      E  +   GD+NI P   D ++    +       
Sbjct: 121 DDEHMPYKLKWLESLKSHAQSLVTENPEAQVALMGDWNIAPFDDDVWDIDLFVNNGYTHV 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
           +   R +F   +  GFTD +R       +Y++WDY    + K +G+RID ++ S    S 
Sbjct: 181 SPPERAAFHAFETAGFTDVVRPYTPGPGVYTYWDYTQLRFPKKEGMRIDFVLASKALASR 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
           +  A ID + R     SDH PV+V L
Sbjct: 241 VTGASIDREERKGKGASDHAPVLVEL 266


>gi|304386652|ref|ZP_07368935.1| exodeoxyribonuclease III [Neisseria meningitidis ATCC 13091]
 gi|304339271|gb|EFM05348.1| exodeoxyribonuclease III [Neisseria meningitidis ATCC 13091]
          Length = 256

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 90/260 (34%), Positives = 133/260 (51%), Gaps = 4/260 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + TWNVNS+  R+  +   + +N PDI+ LQE K +   FP   LQ + +H    GQK
Sbjct: 1   MKITTWNVNSLNVRLPQVQNLLADNPPDILVLQELKLDQDKFPAAALQMMGWHCVWSGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAI+S+  P ++   LP    D Q R I AT       +R+ N+Y  +G  + S K
Sbjct: 61  TYNGVAIVSRNAPEDVHIGLPALPDDPQRRVIAATVGG----VRVINVYCVNGEALDSPK 116

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K  W      F    +     L+  GD+NI P   DCY+P  W      +   RQ F
Sbjct: 117 FKYKEQWFAALTEFVRDEMTRYGKLVLLGDFNIAPADADCYDPEKWHEKIHCSSVERQWF 176

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + L ++G TD++R  H     Y+++DY    + +  G+RIDHI++SP     L   R+D 
Sbjct: 177 KNLLDLGLTDSLRQVHPEGAFYTWFDYRGAMFQRKLGLRIDHILVSPAMAEALKDVRVDL 236

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
           + R   +PSDH PV    D 
Sbjct: 237 ETRALERPSDHAPVTAEFDW 256


>gi|15802160|ref|NP_288182.1| exonuclease III [Escherichia coli O157:H7 EDL933]
 gi|15831709|ref|NP_310482.1| exonuclease III [Escherichia coli O157:H7 str. Sakai]
 gi|168749430|ref|ZP_02774452.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4113]
 gi|168756758|ref|ZP_02781765.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4401]
 gi|168762180|ref|ZP_02787187.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4501]
 gi|168770517|ref|ZP_02795524.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4486]
 gi|168774945|ref|ZP_02799952.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4196]
 gi|168782171|ref|ZP_02807178.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4076]
 gi|168788152|ref|ZP_02813159.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC869]
 gi|168800064|ref|ZP_02825071.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC508]
 gi|195937435|ref|ZP_03082817.1| exonuclease III [Escherichia coli O157:H7 str. EC4024]
 gi|208810770|ref|ZP_03252646.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4206]
 gi|208816750|ref|ZP_03257870.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4045]
 gi|208821646|ref|ZP_03261966.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4042]
 gi|209395934|ref|YP_002270819.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4115]
 gi|217328604|ref|ZP_03444685.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. TW14588]
 gi|254793367|ref|YP_003078204.1| exonuclease III [Escherichia coli O157:H7 str. TW14359]
 gi|261227757|ref|ZP_05942038.1| exonuclease III [Escherichia coli O157:H7 str. FRIK2000]
 gi|261258078|ref|ZP_05950611.1| exonuclease III [Escherichia coli O157:H7 str. FRIK966]
 gi|291282928|ref|YP_003499746.1| Exodeoxyribonuclease III [Escherichia coli O55:H7 str. CB9615]
 gi|12515771|gb|AAG56735.1|AE005398_1 exonuclease III [Escherichia coli O157:H7 str. EDL933]
 gi|13361922|dbj|BAB35878.1| exonuclease III [Escherichia coli O157:H7 str. Sakai]
 gi|187769420|gb|EDU33264.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4196]
 gi|188016211|gb|EDU54333.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4113]
 gi|189000291|gb|EDU69277.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4076]
 gi|189356216|gb|EDU74635.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4401]
 gi|189360591|gb|EDU79010.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4486]
 gi|189367497|gb|EDU85913.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4501]
 gi|189372068|gb|EDU90484.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC869]
 gi|189377552|gb|EDU95968.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC508]
 gi|208725286|gb|EDZ74993.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4206]
 gi|208731093|gb|EDZ79782.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4045]
 gi|208741769|gb|EDZ89451.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4042]
 gi|209157334|gb|ACI34767.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC4115]
 gi|209768548|gb|ACI82586.1| exonuclease III [Escherichia coli]
 gi|209768550|gb|ACI82587.1| exonuclease III [Escherichia coli]
 gi|209768552|gb|ACI82588.1| exonuclease III [Escherichia coli]
 gi|209768554|gb|ACI82589.1| exonuclease III [Escherichia coli]
 gi|209768556|gb|ACI82590.1| exonuclease III [Escherichia coli]
 gi|217317951|gb|EEC26378.1| exodeoxyribonuclease III [Escherichia coli O157:H7 str. TW14588]
 gi|254592767|gb|ACT72128.1| exonuclease III [Escherichia coli O157:H7 str. TW14359]
 gi|290762801|gb|ADD56762.1| Exodeoxyribonuclease III [Escherichia coli O55:H7 str. CB9615]
 gi|320188437|gb|EFW63099.1| Exodeoxyribonuclease III [Escherichia coli O157:H7 str. EC1212]
 gi|320641598|gb|EFX10986.1| exonuclease III [Escherichia coli O157:H7 str. G5101]
 gi|320646958|gb|EFX15791.1| exonuclease III [Escherichia coli O157:H- str. 493-89]
 gi|320652240|gb|EFX20538.1| exonuclease III [Escherichia coli O157:H- str. H 2687]
 gi|320657841|gb|EFX25603.1| exonuclease III [Escherichia coli O55:H7 str. 3256-97 TW 07815]
 gi|320658415|gb|EFX26109.1| exonuclease III [Escherichia coli O55:H7 str. USDA 5905]
 gi|320668313|gb|EFX35140.1| exonuclease III [Escherichia coli O157:H7 str. LSU-61]
 gi|326342117|gb|EGD65898.1| Exodeoxyribonuclease III [Escherichia coli O157:H7 str. 1044]
 gi|326343669|gb|EGD67431.1| Exodeoxyribonuclease III [Escherichia coli O157:H7 str. 1125]
          Length = 268

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 78/266 (29%), Positives = 124/266 (46%), Gaps = 8/266 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A ++++ PD+I LQETK  D  FP E +  L Y++   GQK
Sbjct: 1   MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            + GVA+L+K  PI +    PGD+ + Q R I A        + + N Y P G       
Sbjct: 61  GHYGVALLTKETPIAVRRGFPGDEEEAQRRIIMAEIPSPLGNVTVINGYFPQGESRDHPI 120

Query: 124 -YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
            +  K  + +    +    L+ E P++  GD NI P         +     +      F 
Sbjct: 121 KFPAKAQFYQNLQNYLETELKRENPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+  ++L + G  D  R  +      +S++DY +  +  N+G+RID ++ S      
Sbjct: 181 PEEREWMERLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAEC 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
                ID + R   KPSDH PV  + 
Sbjct: 241 CVETGIDYEIRSMEKPSDHAPVWATF 266


>gi|288935952|ref|YP_003440011.1| exodeoxyribonuclease III [Klebsiella variicola At-22]
 gi|288890661|gb|ADC58979.1| exodeoxyribonuclease III [Klebsiella variicola At-22]
          Length = 268

 Score =  204 bits (519), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 81/266 (30%), Positives = 124/266 (46%), Gaps = 8/266 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H LAA ++++ PD+I LQETK  D  FP E +  L Y++   GQK
Sbjct: 1   MKFVSFNINGLRARPHQLAAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122
            + GVA+L+K  PI +    P D  + Q R I A        + + N Y P G      T
Sbjct: 61  GHYGVALLTKDTPIAVRRGFPDDGEEAQRRIIMAEIPSPFGNVTVINGYFPQGESRDHET 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K ++ +    +    L  E P++  GD NI P         +     +      F 
Sbjct: 121 KFPAKAAFYQNLQNYLETELNKENPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+   +L   G  D  R  +      +S++DY +  +  N+G+RID ++ S      
Sbjct: 181 PEEREWMDRLLGWGLVDTWRQANPDNQEHFSWFDYRSKGFDDNRGLRIDLLLASQPLAQR 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
                ID + RG  KPSDH PV  + 
Sbjct: 241 CVETGIDYEIRGMEKPSDHAPVWATF 266


>gi|134296326|ref|YP_001120061.1| exodeoxyribonuclease III [Burkholderia vietnamiensis G4]
 gi|134139483|gb|ABO55226.1| Exodeoxyribonuclease III [Burkholderia vietnamiensis G4]
          Length = 271

 Score =  204 bits (518), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 84/256 (32%), Positives = 134/256 (52%), Gaps = 1/256 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+  R  ++  W+ ++  D++CLQE K  D+ +P   L+++ Y     GQK
Sbjct: 14  MKIATWNVNSLNVRKQHVLDWLAQSGADVLCLQELKLPDEKYPRADLEAVGYRSWFTGQK 73

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAIL +   + +       ++       +    +  + +RI + Y P+G    S K
Sbjct: 74  TYNGVAILVRDT-LAVDESDVVRNIPGFDDPQQRVVAVTVEGVRIVSAYFPNGQAPDSDK 132

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W+     +    L+    L   GDYNI P+  D ++P  WE     + + R  F
Sbjct: 133 FLYKMQWLDALHAWLGAELQRYPKLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHF 192

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            KL  +GF DA R        +++WDY   ++ +N G+RIDHI+LSP   +   S  +D 
Sbjct: 193 AKLLELGFVDAFRRFEQPEKTFTWWDYRMFAFRRNAGLRIDHILLSPALAATCTSCEVDR 252

Query: 244 KPRGWTKPSDHTPVIV 259
            PR W +PSDHTPV+ 
Sbjct: 253 VPRTWEQPSDHTPVVA 268


>gi|260768888|ref|ZP_05877822.1| exodeoxyribonuclease III [Vibrio furnissii CIP 102972]
 gi|260616918|gb|EEX42103.1| exodeoxyribonuclease III [Vibrio furnissii CIP 102972]
 gi|315180582|gb|ADT87496.1| exodeoxyribonuclease III [Vibrio furnissii NCTC 11218]
          Length = 269

 Score =  204 bits (518), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 81/267 (30%), Positives = 131/267 (49%), Gaps = 9/267 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V ++N+N +RAR+H L A I ++ PD+I LQE K  D+ FP E ++++ Y +   GQK
Sbjct: 1   MKVISFNINGLRARLHQLQAVIDKHQPDVIGLQEIKVHDEAFPLEDVEAMGYKVYFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121
           ++ GVA+L K  P+E+    P  +D   +   +        Q + + N Y P G+ I+  
Sbjct: 61  AHYGVAMLCKQTPLEVRKGFPTDNDDHQKRMIMATFLNEQGQKVTVMNGYFPQGDNISHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175
           TK+  K  +    + + +     ++ LI  GD NI P               +      F
Sbjct: 121 TKFPYKRQFYADLMTYLNDYHTKDDQLIVMGDINISPIDLDIGIGEPNRQRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E RQ  + L + GF D  R  H   +  +S++DY +  +  N+G+RID I+ +P   +
Sbjct: 181 QPEERQWLKTLLDWGFEDTFRKLHPAVNDQFSWFDYRSKGFDDNRGLRIDVILATPSLAA 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261
               A ID + RG  KPSDH P+    
Sbjct: 241 TCVEAGIDYELRGIEKPSDHAPIWSVF 267


>gi|284921668|emb|CBG34740.1| exodeoxyribonuclease III [Escherichia coli 042]
          Length = 268

 Score =  204 bits (518), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 79/266 (29%), Positives = 124/266 (46%), Gaps = 8/266 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A ++++ PD+I LQETK  D  FP E +  L Y++   GQK
Sbjct: 1   MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            + GVA+L+K  PI +    PGDD + Q R I A        + + N Y P G       
Sbjct: 61  GHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSPLGNVTVINGYFPQGESRDHPI 120

Query: 124 -YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
            +  K  + +    +    L+ E P++  GD NI P         +     +      F 
Sbjct: 121 KFPAKAQFYQNLQNYLETELKRENPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+  ++L + G  D  R  +      +S++DY +  +  N+G+RID ++ S      
Sbjct: 181 PEEREWMERLMSWGLVDTFRQANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAEC 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
                ID + R   KPSDH PV  + 
Sbjct: 241 CVETGIDYEIRSMEKPSDHAPVWATF 266


>gi|300938914|ref|ZP_07153616.1| exodeoxyribonuclease III [Escherichia coli MS 21-1]
 gi|300456174|gb|EFK19667.1| exodeoxyribonuclease III [Escherichia coli MS 21-1]
          Length = 272

 Score =  204 bits (518), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 79/268 (29%), Positives = 125/268 (46%), Gaps = 8/268 (2%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + +   ++N+N +RAR H L A ++++ PD+I LQETK  D  FP E +  L Y++   G
Sbjct: 3   ATMKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHG 62

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           QK + GVA+L+K  PI +    PGDD + Q R I A        + + N Y P G     
Sbjct: 63  QKGHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSPLGNVTVINGYFPQGESRDH 122

Query: 122 TK-YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDAC 174
              +  K  + +    +    L+ E P++  GD NI P         +     +      
Sbjct: 123 PIKFPAKAQFYQNLQNYLETELKRENPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCS 182

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
           F  E R+  ++L + G  D  R  +      +S++DY +  +  N+G+RID ++ S    
Sbjct: 183 FLPEEREWMERLMSWGLVDTFRHANPQTADRFSWFDYRSKVFDDNRGLRIDLLLASQPLA 242

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSL 261
                  ID + R   KPSDH PV  + 
Sbjct: 243 ECCVETGIDYEIRSMEKPSDHAPVWATF 270


>gi|15607568|ref|NP_214941.1| exodeoxyribonuclease III protein [Mycobacterium tuberculosis H37Rv]
 gi|15839814|ref|NP_334851.1| exodeoxyribonuclease III [Mycobacterium tuberculosis CDC1551]
 gi|31791605|ref|NP_854098.1| exodeoxyribonuclease III protein [Mycobacterium bovis AF2122/97]
 gi|121636341|ref|YP_976564.1| putative exodeoxyribonuclease III protein xthA [Mycobacterium bovis
           BCG str. Pasteur 1173P2]
 gi|148660192|ref|YP_001281715.1| exodeoxyribonuclease III [Mycobacterium tuberculosis H37Ra]
 gi|148821623|ref|YP_001286377.1| exodeoxyribonuclease III protein xthA (exonuclease III)
           [Mycobacterium tuberculosis F11]
 gi|167970756|ref|ZP_02553033.1| exodeoxyribonuclease III protein xthA (exonuclease III)
           [Mycobacterium tuberculosis H37Ra]
 gi|215402179|ref|ZP_03414360.1| exodeoxyribonuclease III protein xthA (exonuclease III)
           [Mycobacterium tuberculosis 02_1987]
 gi|215409943|ref|ZP_03418751.1| exodeoxyribonuclease III protein xthA (exonuclease III)
           [Mycobacterium tuberculosis 94_M4241A]
 gi|215425649|ref|ZP_03423568.1| exodeoxyribonuclease III protein xthA (exonuclease III)
           [Mycobacterium tuberculosis T92]
 gi|215429249|ref|ZP_03427168.1| exodeoxyribonuclease III protein xthA (exonuclease III)
           [Mycobacterium tuberculosis EAS054]
 gi|215444523|ref|ZP_03431275.1| exodeoxyribonuclease III protein xthA (exonuclease III)
           [Mycobacterium tuberculosis T85]
 gi|218752060|ref|ZP_03530856.1| exodeoxyribonuclease III protein xthA (exonuclease III)
           [Mycobacterium tuberculosis GM 1503]
 gi|219556248|ref|ZP_03535324.1| exodeoxyribonuclease III protein xthA (exonuclease III)
           [Mycobacterium tuberculosis T17]
 gi|224988813|ref|YP_002643500.1| putative exodeoxyribonuclease III protein [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|253797351|ref|YP_003030352.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           KZN 1435]
 gi|254230777|ref|ZP_04924104.1| exodeoxyribonuclease III protein xthA (exonuclease III)
           [Mycobacterium tuberculosis C]
 gi|254363391|ref|ZP_04979437.1| exodeoxyribonuclease III protein xthA (exonuclease III)
           [Mycobacterium tuberculosis str. Haarlem]
 gi|254549374|ref|ZP_05139821.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           '98-R604 INH-RIF-EM']
 gi|260185294|ref|ZP_05762768.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           CPHL_A]
 gi|260199425|ref|ZP_05766916.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           T46]
 gi|260203577|ref|ZP_05771068.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           K85]
 gi|289441807|ref|ZP_06431551.1| exodeoxyribonuclease III [Mycobacterium tuberculosis T46]
 gi|289445967|ref|ZP_06435711.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           CPHL_A]
 gi|289552676|ref|ZP_06441886.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           KZN 605]
 gi|289568343|ref|ZP_06448570.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           T17]
 gi|289573012|ref|ZP_06453239.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           K85]
 gi|289744123|ref|ZP_06503501.1| exodeoxyribonuclease III protein [Mycobacterium tuberculosis
           02_1987]
 gi|289748911|ref|ZP_06508289.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           T92]
 gi|289752456|ref|ZP_06511834.1| exodeoxyribonuclease III protein [Mycobacterium tuberculosis
           EAS054]
 gi|289756500|ref|ZP_06515878.1| exodeoxyribonuclease III protein [Mycobacterium tuberculosis T85]
 gi|289760543|ref|ZP_06519921.1| exodeoxyribonuclease III protein xthA (exonuclease III)
           [Mycobacterium tuberculosis GM 1503]
 gi|294995932|ref|ZP_06801623.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           210]
 gi|297632911|ref|ZP_06950691.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           KZN 4207]
 gi|297729886|ref|ZP_06959004.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           KZN R506]
 gi|298523904|ref|ZP_07011313.1| exodeoxyribonuclease III protein XthA [Mycobacterium tuberculosis
           94_M4241A]
 gi|306774523|ref|ZP_07412860.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           SUMu001]
 gi|306779272|ref|ZP_07417609.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           SUMu002]
 gi|306783061|ref|ZP_07421383.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           SUMu003]
 gi|306787428|ref|ZP_07425750.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           SUMu004]
 gi|306791980|ref|ZP_07430282.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           SUMu005]
 gi|306796167|ref|ZP_07434469.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           SUMu006]
 gi|306966432|ref|ZP_07479093.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           SUMu009]
 gi|306970627|ref|ZP_07483288.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           SUMu010]
 gi|307078353|ref|ZP_07487523.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           SUMu011]
 gi|307082911|ref|ZP_07492024.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           SUMu012]
 gi|313657215|ref|ZP_07814095.1| exodeoxyribonuclease III [Mycobacterium tuberculosis KZN V2475]
 gi|1817693|emb|CAB06567.1| PROBABLE EXODEOXYRIBONUCLEASE III PROTEIN XTHA (EXONUCLEASE III)
           (EXO III) (AP ENDONUCLEASE VI) [Mycobacterium
           tuberculosis H37Rv]
 gi|13879945|gb|AAK44665.1| exodeoxyribonuclease III [Mycobacterium tuberculosis CDC1551]
 gi|31617191|emb|CAD93298.1| PROBABLE EXODEOXYRIBONUCLEASE III PROTEIN XTHA (EXONUCLEASE III)
           (EXO III) (AP ENDONUCLEASE VI) [Mycobacterium bovis
           AF2122/97]
 gi|121491988|emb|CAL70451.1| Probable exodeoxyribonuclease III protein xthA [Mycobacterium bovis
           BCG str. Pasteur 1173P2]
 gi|124599836|gb|EAY58846.1| exodeoxyribonuclease III protein xthA (exonuclease III)
           [Mycobacterium tuberculosis C]
 gi|134148905|gb|EBA40950.1| exodeoxyribonuclease III protein xthA (exonuclease III)
           [Mycobacterium tuberculosis str. Haarlem]
 gi|148504344|gb|ABQ72153.1| exodeoxyribonuclease III [Mycobacterium tuberculosis H37Ra]
 gi|148720150|gb|ABR04775.1| exodeoxyribonuclease III protein xthA (exonuclease III)
           [Mycobacterium tuberculosis F11]
 gi|224771926|dbj|BAH24732.1| putative exodeoxyribonuclease III protein [Mycobacterium bovis BCG
           str. Tokyo 172]
 gi|253318854|gb|ACT23457.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           KZN 1435]
 gi|289414726|gb|EFD11966.1| exodeoxyribonuclease III [Mycobacterium tuberculosis T46]
 gi|289418925|gb|EFD16126.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           CPHL_A]
 gi|289437308|gb|EFD19801.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           KZN 605]
 gi|289537443|gb|EFD42021.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           K85]
 gi|289542096|gb|EFD45745.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           T17]
 gi|289684651|gb|EFD52139.1| exodeoxyribonuclease III protein [Mycobacterium tuberculosis
           02_1987]
 gi|289689498|gb|EFD56927.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           T92]
 gi|289693043|gb|EFD60472.1| exodeoxyribonuclease III protein [Mycobacterium tuberculosis
           EAS054]
 gi|289708049|gb|EFD72065.1| exodeoxyribonuclease III protein xthA (exonuclease III)
           [Mycobacterium tuberculosis GM 1503]
 gi|289712064|gb|EFD76076.1| exodeoxyribonuclease III protein [Mycobacterium tuberculosis T85]
 gi|298493698|gb|EFI28992.1| exodeoxyribonuclease III protein XthA [Mycobacterium tuberculosis
           94_M4241A]
 gi|308216872|gb|EFO76271.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           SUMu001]
 gi|308327716|gb|EFP16567.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           SUMu002]
 gi|308332078|gb|EFP20929.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           SUMu003]
 gi|308335893|gb|EFP24744.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           SUMu004]
 gi|308339470|gb|EFP28321.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           SUMu005]
 gi|308343335|gb|EFP32186.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           SUMu006]
 gi|308355828|gb|EFP44679.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           SUMu009]
 gi|308359748|gb|EFP48599.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           SUMu010]
 gi|308363690|gb|EFP52541.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           SUMu011]
 gi|308367342|gb|EFP56193.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           SUMu012]
 gi|323721099|gb|EGB30161.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           CDC1551A]
 gi|326902253|gb|EGE49186.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           W-148]
 gi|328457137|gb|AEB02560.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           KZN 4207]
          Length = 291

 Score =  204 bits (518), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 78/266 (29%), Positives = 126/266 (47%), Gaps = 7/266 (2%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           ++ +ATWNVNSIR R+  +  W+   + D++ +QETK  D  FP   L  L Y +   G 
Sbjct: 23  LLRLATWNVNSIRTRLDRVLDWLGRADVDVLAMQETKCPDGQFPALPLFELGYDVAHVGF 82

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-----TQTLRIGNLYLPHGN 117
             +NGVAI S+    ++     G         + AT            +R+ +LY+P+G 
Sbjct: 83  DQWNGVAIASRVGLDDVRVGFDGQPSWSGKPEVAATTEARALGATCGGIRVWSLYVPNGR 142

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEE--PLIFAGDYNIIPQPHDCYNPIIWENDACF 175
            +    Y  K+ W+      A   L  +   P+   GD+NI P   D ++   +      
Sbjct: 143 ALDDPHYTYKLDWLAALRDTAEGWLRDDPAAPIALMGDWNIAPTDDDVWSTEFFAGCTHV 202

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
           +   R++F  + +  FTD +R       +Y++WDY    + K +G+RID I+ SP   + 
Sbjct: 203 SEPERKAFNAIVDAQFTDVVRPFTPGPGVYTYWDYTQLRFPKKQGMRIDFILGSPALAAR 262

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
           +  A+I  + R    PSDH PV+V L
Sbjct: 263 VMDAQIVREERKGKAPSDHAPVLVDL 288


>gi|161870674|ref|YP_001599847.1| exodeoxyribonuclease III [Neisseria meningitidis 053442]
 gi|161596227|gb|ABX73887.1| exodeoxyribonuclease III [Neisseria meningitidis 053442]
 gi|319411070|emb|CBY91471.1| exodeoxyribonuclease III (exonuclease III; EXO III) [Neisseria
           meningitidis WUE 2594]
          Length = 256

 Score =  204 bits (518), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 91/260 (35%), Positives = 134/260 (51%), Gaps = 4/260 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + TWNVNS+  R+  +   + +N PDI+ LQE K +   FP   LQ + +H    GQK
Sbjct: 1   MKITTWNVNSLNVRLPQVQNLLADNPPDILVLQELKLDQDKFPAAALQMMGWHCVWSGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAI+S+  P ++   LP    D Q R I AT       +R+ N+Y  +G  + S K
Sbjct: 61  TYNGVAIVSRNAPEDVHIGLPALPDDPQRRVIAATVGG----VRVINVYCVNGEALDSPK 116

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K  W      F    +     L+  GD+NI P   DCY+P  W      +   RQ F
Sbjct: 117 FKYKEQWFAALTEFVRDEMTRYGKLVLLGDFNIAPADADCYDPEKWHEKIHCSSVERQWF 176

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q L ++G TD++R  H     Y+++DY    + +  G+RIDHI++SP   + L   R+D 
Sbjct: 177 QNLLDLGLTDSLRQVHPEGAFYTWFDYRGAMFQRKLGLRIDHILVSPAMAAALKDVRVDL 236

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
           + R   +PSDH PV    D 
Sbjct: 237 ETRALERPSDHAPVTAEFDW 256


>gi|301632179|ref|XP_002945168.1| PREDICTED: exodeoxyribonuclease III-like [Xenopus (Silurana)
           tropicalis]
          Length = 263

 Score =  204 bits (518), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 92/258 (35%), Positives = 135/258 (52%), Gaps = 1/258 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + TWN+NS+  R+  +  W+  N  D + LQE K  D  FP +   +  Y     GQK
Sbjct: 1   MRITTWNINSLAVRLPQVLDWLAANPVDALALQELKLTDDKFPADAFAAAGYRAVVFGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAILS+Y   ++V ++PG   D QAR I AT    T  LR+ N Y  +G    S K
Sbjct: 61  TYNGVAILSRYPMTDVVRNIPGF-ADEQARVIAATLDTPTGPLRLVNGYFVNGQAPGSDK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W++    +    L L   L   GD+N+ P+  D ++P         T + R  F
Sbjct: 120 FAYKMRWLQALQDWLRSELALHPRLALVGDFNVAPEDRDSHDPEGLRETIHHTTQERLHF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q L  +G  DA R        +S+WDY    + KN+G+RIDHI++S     L+ +  +D 
Sbjct: 180 QALLGLGLVDAFRLFVQPEKSFSWWDYRMLGFQKNRGLRIDHILVSQMLAPLVSACAVDR 239

Query: 244 KPRGWTKPSDHTPVIVSL 261
            PR   +PSDH PV+V+L
Sbjct: 240 LPRKNKQPSDHAPVVVTL 257


>gi|161503598|ref|YP_001570710.1| exonuclease III [Salmonella enterica subsp. arizonae serovar
           62:z4,z23:-- str. RSK2980]
 gi|160864945|gb|ABX21568.1| hypothetical protein SARI_01677 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 268

 Score =  204 bits (518), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 77/268 (28%), Positives = 122/268 (45%), Gaps = 8/268 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A ++++ PD+I LQETK  D+ FP E +  L Y++   GQK
Sbjct: 1   MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDEMFPLEEVAKLGYNVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122
            + GVA+L+K  PI +    P D  + Q R I A        + + N Y P G       
Sbjct: 61  GHYGVALLTKATPISVRRGFPDDGEEAQRRIIMAEIPSPLGNITVINGYFPQGESRDHPL 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  + +    +    L+ + P++  GD NI P         +     +      F 
Sbjct: 121 KFPAKAQFYQNLQNYLETELKCDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+   +L   G  D  R  +      +S++DY +  +  N+G+RID ++ S      
Sbjct: 181 PEEREWMSRLLKWGLVDTFRQANPETVDKFSWFDYRSKGFVDNRGLRIDLLLASRPLAER 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                ID   R   KPSDH PV  +  +
Sbjct: 241 CAETGIDYDIRSMEKPSDHAPVWATFRV 268


>gi|218705247|ref|YP_002412766.1| exonuclease III [Escherichia coli UMN026]
 gi|293405248|ref|ZP_06649240.1| exodeoxyribonuclease III [Escherichia coli FVEC1412]
 gi|298380891|ref|ZP_06990490.1| exodeoxyribonuclease III [Escherichia coli FVEC1302]
 gi|218432344|emb|CAR13234.1| exonuclease III [Escherichia coli UMN026]
 gi|291427456|gb|EFF00483.1| exodeoxyribonuclease III [Escherichia coli FVEC1412]
 gi|298278333|gb|EFI19847.1| exodeoxyribonuclease III [Escherichia coli FVEC1302]
 gi|323186929|gb|EFZ72247.1| exodeoxyribonuclease III [Escherichia coli RN587/1]
          Length = 268

 Score =  204 bits (518), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 79/266 (29%), Positives = 124/266 (46%), Gaps = 8/266 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A ++++ PD+I LQETK  D  FP E +  L Y++   GQK
Sbjct: 1   MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            + GVA+L+K  PI +    PGDD + Q R I A        + + N Y P G       
Sbjct: 61  GHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSTLGNVTVINGYFPQGESRDHPI 120

Query: 124 -YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
            +  K  + +    +    L+ E P++  GD NI P         +     +      F 
Sbjct: 121 KFPAKAQFYQNLQNYLETELKRENPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+  ++L + G  D  R  +      +S++DY +  +  N+G+RID ++ S      
Sbjct: 181 PEEREWMERLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAEC 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
                ID + R   KPSDH PV  + 
Sbjct: 241 CVETGIDYEIRSMEKPSDHAPVWATF 266


>gi|163841804|ref|YP_001626209.1| exodeoxyribonuclease III [Renibacterium salmoninarum ATCC 33209]
 gi|162955280|gb|ABY24795.1| exodeoxyribonuclease III [Renibacterium salmoninarum ATCC 33209]
          Length = 267

 Score =  204 bits (518), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 81/266 (30%), Positives = 129/266 (48%), Gaps = 8/266 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+RAR   +  W++  + D++ +QETK +D+NFP+E  ++  Y +   G  
Sbjct: 1   MKIATWNVNSLRARADRVEDWLRRTDIDVLAIQETKCKDENFPWELFENNGYEVAHFGFS 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT----FTINTQTLRIGNLYLPHGNPI 119
            +NGVAI SK    ++    PG     +                  +R+ +LY+P+G  +
Sbjct: 61  QWNGVAIASKVGLDDVERTFPGQPAFGKPGVEPEQEGRAIAATCGGVRVWSLYVPNGRAL 120

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIF--AGDYNIIPQPHDCYNPIIWE--NDACF 175
                  K+ W++     A   L  +        GD+NI PQ  D ++   +       F
Sbjct: 121 DDPHMPYKLEWLRVLNEEAKGWLAKDPNAQIALVGDWNIAPQDDDVWDVKYFIDEGLTHF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
           +   R +FQ  +  GFTD +R +H    +Y++WDY    + K +G+RID IM SP   + 
Sbjct: 181 SAPERAAFQAFEAAGFTDVVRPSHPGPGVYTYWDYKQLRFPKKEGMRIDFIMASPALAAR 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
           +    ID + R     SDH PVI  L
Sbjct: 241 VVHTEIDREERKGKGASDHAPVIAEL 266


>gi|126662905|ref|ZP_01733904.1| exodeoxyribonuclease III [Flavobacteria bacterium BAL38]
 gi|126626284|gb|EAZ96973.1| exodeoxyribonuclease III [Flavobacteria bacterium BAL38]
          Length = 253

 Score =  204 bits (518), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 79/263 (30%), Positives = 126/263 (47%), Gaps = 14/263 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY---HIET 59
           + + ++NVN IRA I      W+++ NPD+ICLQE K  ++  P   +++  Y   +  +
Sbjct: 1   MKIISYNVNGIRAAISKGFLEWLQQANPDVICLQEIKATEEQIPKLEIEAAGYPYQYYFS 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GVA+LSK +P  IV       +D + R +   F      L + +LYLP G  I
Sbjct: 61  AEKKGYSGVAVLSKIEPKTIVFGTGIKHMDFEGRNLRVDFD----KLSVMSLYLPSGTNI 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                D K  ++  F  +  +  +    L+  GDYNI  +  D ++PI     + F  E 
Sbjct: 117 DR--LDYKFQYMAEFQLYVDELKKEIPNLVICGDYNICHEAIDIHDPIRNAKVSGFLPEE 174

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R         GF D  R  +   + YS+W Y A++ + NKG RID+ + +      +  A
Sbjct: 175 RAWLDGFLKNGFVDTFRHLNKEPNNYSWWSYRANARNNNKGWRIDYCLATESLKEKIQRA 234

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
            I  +     K SDH PV+V + 
Sbjct: 235 LILPEA----KHSDHCPVLVEIK 253


>gi|293415066|ref|ZP_06657709.1| exodeoxyribonuclease III [Escherichia coli B185]
 gi|291432714|gb|EFF05693.1| exodeoxyribonuclease III [Escherichia coli B185]
          Length = 268

 Score =  204 bits (518), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 79/266 (29%), Positives = 124/266 (46%), Gaps = 8/266 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A ++++ PD+I LQETK  D  FP E +  L Y++   GQK
Sbjct: 1   MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            + GVA+L+K  PI +    PGDD + Q R I A        + + N Y P G       
Sbjct: 61  GHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSPLGNVTVINGYFPQGESRDHPI 120

Query: 124 -YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
            +  K  + +    +    L+ E P++  GD NI P         +     +      F 
Sbjct: 121 KFPAKAQFYQNLQNYLETELKRENPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+  ++L + G  D  R  +      +S++DY +  +  N+G+RID ++ S      
Sbjct: 181 PEEREWMERLMSWGLVDTFRHANPQTAERFSWFDYRSKGFDDNRGLRIDLLLASQPLAEC 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
                ID + R   KPSDH PV  + 
Sbjct: 241 CVETGIDYEIRSMEKPSDHAPVWATF 266


>gi|162138430|ref|YP_540952.2| exonuclease III [Escherichia coli UTI89]
 gi|170683141|ref|YP_001743499.1| exonuclease III [Escherichia coli SMS-3-5]
 gi|215486966|ref|YP_002329397.1| exonuclease III [Escherichia coli O127:H6 str. E2348/69]
 gi|218558617|ref|YP_002391530.1| exonuclease III [Escherichia coli S88]
 gi|218689690|ref|YP_002397902.1| exonuclease III [Escherichia coli ED1a]
 gi|293410066|ref|ZP_06653642.1| exodeoxyribonuclease III [Escherichia coli B354]
 gi|306814999|ref|ZP_07449155.1| exonuclease III [Escherichia coli NC101]
 gi|312966949|ref|ZP_07781167.1| exodeoxyribonuclease III [Escherichia coli 2362-75]
 gi|331663230|ref|ZP_08364140.1| exodeoxyribonuclease III [Escherichia coli TA143]
 gi|170520859|gb|ACB19037.1| exodeoxyribonuclease III [Escherichia coli SMS-3-5]
 gi|215265038|emb|CAS09425.1| exonuclease III [Escherichia coli O127:H6 str. E2348/69]
 gi|218365386|emb|CAR03109.1| exonuclease III [Escherichia coli S88]
 gi|218427254|emb|CAR08144.2| exonuclease III [Escherichia coli ED1a]
 gi|222033502|emb|CAP76243.1| exodeoxyribonuclease III [Escherichia coli LF82]
 gi|291470534|gb|EFF13018.1| exodeoxyribonuclease III [Escherichia coli B354]
 gi|294494019|gb|ADE92775.1| exodeoxyribonuclease III [Escherichia coli IHE3034]
 gi|305851647|gb|EFM52100.1| exonuclease III [Escherichia coli NC101]
 gi|307626765|gb|ADN71069.1| exonuclease III [Escherichia coli UM146]
 gi|312288413|gb|EFR16315.1| exodeoxyribonuclease III [Escherichia coli 2362-75]
 gi|312946349|gb|ADR27176.1| exonuclease III [Escherichia coli O83:H1 str. NRG 857C]
 gi|320194541|gb|EFW69172.1| Exodeoxyribonuclease III [Escherichia coli WV_060327]
 gi|323952256|gb|EGB48129.1| exodeoxyribonuclease III [Escherichia coli H252]
 gi|323956518|gb|EGB52259.1| exodeoxyribonuclease III [Escherichia coli H263]
 gi|331059029|gb|EGI31006.1| exodeoxyribonuclease III [Escherichia coli TA143]
          Length = 268

 Score =  204 bits (518), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 79/266 (29%), Positives = 124/266 (46%), Gaps = 8/266 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A ++++ PD+I LQETK  D  FP E +  L Y++   GQK
Sbjct: 1   MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            + GVA+L+K  PI +    PGDD + Q R I A        + + N Y P G       
Sbjct: 61  GHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSPLGNVTVINGYFPQGESRDHPI 120

Query: 124 -YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
            +  K  + +    +    L+ E P++  GD NI P         +     +      F 
Sbjct: 121 KFPAKAQFYQNLQNYLETELKRENPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+  ++L + G  D  R  +      +S++DY +  +  N+G+RID ++ S      
Sbjct: 181 PEEREWMERLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAEC 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
                ID + R   KPSDH PV  + 
Sbjct: 241 CVETGIDYEIRSMEKPSDHAPVWATF 266


>gi|284993327|ref|YP_003411882.1| exodeoxyribonuclease III Xth [Geodermatophilus obscurus DSM 43160]
 gi|284066573|gb|ADB77511.1| exodeoxyribonuclease III Xth [Geodermatophilus obscurus DSM 43160]
          Length = 264

 Score =  204 bits (518), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 75/262 (28%), Positives = 132/262 (50%), Gaps = 4/262 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSIR R   + AW++ ++ D++ LQETK  D  FP      L Y +   G  
Sbjct: 1   MRIATWNVNSIRTRADRVVAWLQRSDVDVLALQETKCRDDQFPESCFTDLGYQVAHVGHS 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGD--DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
            +NGVA+LS+    ++    PG     + +              +R+ +LY+P+G  +T 
Sbjct: 61  QWNGVALLSRVGLEDVEVAFPGQPGFGNPEPAVEARALAATCGGVRVWSLYVPNGRTLTD 120

Query: 122 TKYDDKISWIKRFLRFASQRL--ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
             Y+ K+ W+      A+  L  +    +   GD+NI PQ  D ++  ++ +    +   
Sbjct: 121 PHYEYKLRWLGALRTAAAGWLAEDGGAQVALVGDWNIAPQDDDVWDVRVFAHSTHVSEPE 180

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R +F+ + + G+ D +R       ++++WDY    +++ +G+RID ++ SP     + +A
Sbjct: 181 RAAFRAIVDAGYADVVRPHTPGPGVFTYWDYTQLRFARREGMRIDFVLGSPALAVRVTNA 240

Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261
            ID + R     SDH PV+V L
Sbjct: 241 LIDRQERKGKGASDHAPVVVDL 262


>gi|218548682|ref|YP_002382473.1| exonuclease III [Escherichia fergusonii ATCC 35469]
 gi|218356223|emb|CAQ88840.1| exonuclease III [Escherichia fergusonii ATCC 35469]
 gi|324113497|gb|EGC07472.1| exodeoxyribonuclease III [Escherichia fergusonii B253]
          Length = 268

 Score =  204 bits (518), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 77/266 (28%), Positives = 123/266 (46%), Gaps = 8/266 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A ++++ PD+I LQETK  D  FP E +  L Y++   GQK
Sbjct: 1   MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            + GVA+L+K  PI +    PGD  + Q R I A        + + N Y P G       
Sbjct: 61  GHYGVALLTKETPIAVRRGFPGDGEEAQRRIIMAEIPSPLGNVTVINGYFPQGESRDHPI 120

Query: 124 -YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
            +  K  + +    +    L+ + P++  GD NI P         +     +      F 
Sbjct: 121 KFPAKAQFYQNLQNYLETELKRDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+  ++L + G  D  R  +      +S++DY +  +  N+G+RID ++ S      
Sbjct: 181 PEEREWMERLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAEC 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
                ID + R   KPSDH PV  + 
Sbjct: 241 CVETGIDYEIRSMEKPSDHAPVWATF 266


>gi|311899750|dbj|BAJ32158.1| putative exodeoxyribonuclease III [Kitasatospora setae KM-6054]
          Length = 270

 Score =  204 bits (518), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 75/269 (27%), Positives = 118/269 (43%), Gaps = 8/269 (2%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
            V +ATWN+NS+ AR+  L  W++   PD++CLQE K     FP E +  L Y     G 
Sbjct: 2   TVRIATWNINSVTARLPKLLEWLESAAPDVLCLQELKCATDAFPAEAVAELGYESAAHGD 61

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI--------NTQTLRIGNLYLP 114
             +NGVA+LS+    ++V  LP            A   +            +R+ ++Y+P
Sbjct: 62  GRWNGVALLSRIGLADVVRDLPAQPGYRADDADPAEAPVVEPRAIAATCGPVRVWSVYVP 121

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
           +G  +    Y  K+ W+               P    GD+N+ P   D Y+   +     
Sbjct: 122 NGREVDHAHYRYKLEWMAALRDAVRDDAAGGRPFAVLGDFNVAPTDEDVYDLAAFAGLTH 181

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
            T   R +   L+ +G  D +         Y+FWDY A ++ KN+G+RID    +     
Sbjct: 182 VTAPERATLAALRELGLRDVVPRPLKYDRPYTFWDYRALAFPKNRGMRIDLTYANEPFAD 241

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            +    +D + R     SDH PV+V LD+
Sbjct: 242 AVTDTYVDREARKGKGTSDHAPVVVDLDL 270


>gi|281178820|dbj|BAI55150.1| exonuclease III [Escherichia coli SE15]
 gi|330911554|gb|EGH40064.1| exodeoxyribonuclease 3 [Escherichia coli AA86]
          Length = 268

 Score =  204 bits (518), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 79/266 (29%), Positives = 124/266 (46%), Gaps = 8/266 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A ++++ PD+I LQETK  D  FP E +  L Y++   GQK
Sbjct: 1   MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            + GVA+L+K  PI +    PGDD + Q R I A        + + N Y P G       
Sbjct: 61  GHYGVALLTKETPISVRRGFPGDDEEAQRRIIMAEIPSPLGNITVINGYFPQGESRDHPI 120

Query: 124 -YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
            +  K  + +    +    L+ E P++  GD NI P         +     +      F 
Sbjct: 121 KFPAKAQFYQNLQNYLETELKRENPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+  ++L + G  D  R  +      +S++DY +  +  N+G+RID ++ S      
Sbjct: 181 PEEREWMERLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAEC 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
                ID + R   KPSDH PV  + 
Sbjct: 241 CVETGIDYEIRSMEKPSDHAPVWATF 266


>gi|254672519|emb|CBA06061.1| exodeoxyribonuclease III [Neisseria meningitidis alpha275]
 gi|254673406|emb|CBA08729.1| exodeoxyribonuclease III [Neisseria meningitidis alpha275]
 gi|308388602|gb|ADO30922.1| exodeoxyribonuclease III [Neisseria meningitidis alpha710]
 gi|325130865|gb|EGC53597.1| exodeoxyribonuclease III [Neisseria meningitidis OX99.30304]
 gi|325136967|gb|EGC59564.1| exodeoxyribonuclease III [Neisseria meningitidis M0579]
 gi|325202788|gb|ADY98242.1| exodeoxyribonuclease III [Neisseria meningitidis M01-240149]
 gi|325208783|gb|ADZ04235.1| exodeoxyribonuclease III [Neisseria meningitidis NZ-05/33]
          Length = 256

 Score =  204 bits (518), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 90/260 (34%), Positives = 134/260 (51%), Gaps = 4/260 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + TWNVNS+  R+  +   + +N PDI+ LQE K +   FP   LQ + +H    GQK
Sbjct: 1   MKITTWNVNSLNVRLPQVQNLLADNPPDILVLQELKLDQDKFPAAALQMMGWHCVWSGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAI+S+  P ++   LP    D Q R I AT       +R+ N+Y  +G  + S K
Sbjct: 61  TYNGVAIVSRNAPEDVHIGLPALPDDPQRRVIAATVGG----VRVINVYCVNGEALDSPK 116

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K  W      F    +     L+  GD+NI P   DCY+P  W      +   RQ F
Sbjct: 117 FKYKEQWFAALTEFVRDEMTRYGKLVLLGDFNIAPADADCYDPEKWHEKIHCSSVERQWF 176

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + L ++G TD++R  H     Y+++DY    + +  G+RIDHI++SP   + L   R+D 
Sbjct: 177 KNLLDLGLTDSLRQVHPEGAFYTWFDYRGAMFQRKLGLRIDHILVSPAMAAALKDVRVDL 236

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
           + R   +PSDH PV    D 
Sbjct: 237 ETRALERPSDHAPVTAEFDW 256


>gi|330953392|gb|EGH53652.1| exonuclease III [Pseudomonas syringae Cit 7]
          Length = 270

 Score =  204 bits (518), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 89/269 (33%), Positives = 134/269 (49%), Gaps = 11/269 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +RAR H LAA I ++ PD+I LQETK  D+ FP   +++L YH+   GQK
Sbjct: 1   MKIVSFNINGLRARPHQLAALIDKHQPDVIGLQETKVSDEQFPQAEVEALGYHVHFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122
            + GVA+LS+  P+ +     GDD + Q RFI  T+   N Q + I N Y P G      
Sbjct: 61  GHYGVALLSRNAPLALHKGFEGDDEESQKRFIWGTYADSNGQPVTIMNGYFPQGESRDHP 120

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175
            K+  K  + +            ++PLI  GD NI PQ        D     +      F
Sbjct: 121 TKFPAKQRFYENLQTLLEGHFSNDQPLIVMGDVNISPQDCDIGIGADNAKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232
             E R+  ++L+N G  D+ R  +      +S++DY +  +     +G+RID IM S   
Sbjct: 181 LPEEREWMERLKNWGLVDSFRHLYPEVVDRFSWFDYRSRGFEDEPKRGLRIDLIMTSTGL 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
              +  A +D   RG  KPSDH P+ + L
Sbjct: 241 QPRIKEAGVDYDLRGMEKPSDHAPIWLEL 269


>gi|145299881|ref|YP_001142722.1| exodeoxyribonuclease III [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|142852653|gb|ABO90974.1| exodeoxyribonuclease III [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 268

 Score =  204 bits (518), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 80/267 (29%), Positives = 132/267 (49%), Gaps = 9/267 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +RAR+H L A I ++ PD+I LQE K  D+ FP   ++++ YH+E  GQK
Sbjct: 1   MKIISFNINGLRARLHQLQAIIDKHQPDVIGLQEIKVHDEAFPLADVEAMGYHVEFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLD-VQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121
           ++ GVAI+SK +P+E+    P D  D  +   +      +   +++ N Y P G      
Sbjct: 61  AHYGVAIMSKQKPVEVQKGFPTDPEDAQRRMIMATFKREDGSLIKVMNGYFPQGENQDHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175
           TK+  K  + +    +        + L+  GD NI P               + E    F
Sbjct: 121 TKFPAKQKFYENLQHYLETHHTPNDQLVLIGDVNISPTDLDIGIGEANRKRWLREGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
               R+  ++L+  G TD  RA + T    +S++DY +  + +N+G+RID IM S     
Sbjct: 181 LPIEREWMERLKGFGLTDTFRAANPTECERFSWFDYRSKGFDENRGLRIDLIMASDALKD 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261
            +    ID + RG  KPSDH P+  + 
Sbjct: 241 TVTETGIDYELRGIEKPSDHAPIWATF 267


>gi|215409940|ref|ZP_03418748.1| exodeoxyribonuclease III protein xthA (exonuclease III)
           [Mycobacterium tuberculosis 94_M4241A]
 gi|298523903|ref|ZP_07011312.1| exodeoxyribonuclease III protein XthA [Mycobacterium tuberculosis
           94_M4241A]
 gi|298493697|gb|EFI28991.1| exodeoxyribonuclease III protein XthA [Mycobacterium tuberculosis
           94_M4241A]
          Length = 273

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 78/267 (29%), Positives = 127/267 (47%), Gaps = 7/267 (2%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           +++ +ATWNVNSIR R+  +  W+   + D++ +QETK  D  FP   L  L Y +   G
Sbjct: 4   ALLRLATWNVNSIRTRLDRVLDWLGRADVDVLAMQETKCPDGQFPALPLFELGYDVAHVG 63

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-----TQTLRIGNLYLPHG 116
              +NGVAI S+    ++     G         + AT            +R+ +LY+P+G
Sbjct: 64  FDQWNGVAIASRVGLDDVRVGFDGQPSWSGKPEVAATTEARALGATCGGIRVWSLYVPNG 123

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEE--PLIFAGDYNIIPQPHDCYNPIIWENDAC 174
             +    Y  K+ W+      A   L  +   P+   GD+NI P   D ++   +     
Sbjct: 124 RALDDPHYTYKLDWLAALRDTAEGWLRDDPAAPIALMGDWNIAPTDDDVWSTEFFAGCTH 183

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
            +   R++F  + +  FTD +R       +Y++WDY    + K +G+RID I+ SP   +
Sbjct: 184 VSEPERKAFNAIVDAQFTDVVRPFTPGPGVYTYWDYTQLRFPKKQGMRIDFILGSPALAA 243

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261
            +  A+I  + R    PSDH PV+V L
Sbjct: 244 RVMDAQIVREERKGKAPSDHAPVLVDL 270


>gi|16119275|ref|NP_395981.1| exodeoxyribonuclease III [Agrobacterium tumefaciens str. C58]
 gi|15161781|gb|AAK90422.1| exodeoxyribonuclease III [Agrobacterium tumefaciens str. C58]
          Length = 258

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 104/260 (40%), Positives = 153/260 (58%), Gaps = 5/260 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+NVN I  R+  L  W+ E  PD++CLQE K  +  FP   ++   Y     GQK
Sbjct: 1   MKLATYNVNGINGRLEVLLRWLAEAKPDVVCLQELKAPNDKFPRREIERAGYGAIWRGQK 60

Query: 64  SYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           S+NGVAIL++  +P E    LPGD  D  +R+IEA        + IG LYLP+GNP    
Sbjct: 61  SWNGVAILARDQEPRETRRGLPGDPDDSHSRYIEAAIDG----IVIGCLYLPNGNPAPGP 116

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           K+D K+ W +R   +A++  EL+ P+   GD+N++P   D Y P  W +DA F  EVR +
Sbjct: 117 KFDYKLRWFERLYSYAAELFELDVPVALVGDFNVMPTDLDVYKPERWRDDALFRPEVRAA 176

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           + +L  MG+TDA+R  H    +Y+FW Y+ ++++++ G+RIDH +LSP     L +  +D
Sbjct: 177 YAELIAMGWTDAVRLLHPEERIYTFWKYFRNAFARDAGLRIDHFLLSPSLRERLQTCGVD 236

Query: 243 TKPRGWTKPSDHTPVIVSLD 262
              R W   SDH PV + LD
Sbjct: 237 KFARAWEHTSDHAPVWIELD 256


>gi|296114978|ref|ZP_06833622.1| putative exodeoxyribonuclease III [Gluconacetobacter hansenii ATCC
           23769]
 gi|295978440|gb|EFG85174.1| putative exodeoxyribonuclease III [Gluconacetobacter hansenii ATCC
           23769]
          Length = 260

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 99/258 (38%), Positives = 137/258 (53%), Gaps = 3/258 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +  ATWNVNSIR R  ++  W++   PD+I LQE K  +  FP +  +   Y     GQK
Sbjct: 1   MKFATWNVNSIRQRHDHVLQWLEREQPDLIGLQEIKCIEDQFPADAFRKAGYESVVVGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           SYNGVAILS+         LPG + +           I T+ L  GNLYLP+GN      
Sbjct: 61  SYNGVAILSRVPFTVTHRALPGWECEPPQ---ARYVEIRTEALTFGNLYLPNGNSGGKAG 117

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           YD+K++++    + A   L      +  GDYN+ P   D     +  +DA      R +F
Sbjct: 118 YDNKLAFMAALAQHARDLLHAGTDFVLTGDYNVCPTDEDLAPGALPPDDALVRPASRAAF 177

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + L  +G TDA+RA H     Y+FWDY A +W ++ G+RIDH +LSP     L SA  D 
Sbjct: 178 RTLLWLGLTDALRALHPVGRFYTFWDYQAGAWQRDSGLRIDHALLSPRVAERLLSAIPDR 237

Query: 244 KPRGWTKPSDHTPVIVSL 261
           + R  T+PSDH P+IV+L
Sbjct: 238 EERNMTQPSDHVPLIVTL 255


>gi|332141071|ref|YP_004426809.1| exodeoxyribonuclease III [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327551093|gb|AEA97811.1| exodeoxyribonuclease III [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 269

 Score =  204 bits (518), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 86/268 (32%), Positives = 132/268 (49%), Gaps = 9/268 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V ++N+N IRAR+H L A I  + PDII LQE K  ++ FP E ++++ YH+   GQK
Sbjct: 1   MKVISFNINGIRARLHQLQAVIDAHQPDIIGLQEIKVHNEQFPVEAVEAMGYHVYFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLD-VQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121
           S+ GVA L+K +P+ +    P D+ D  +   I  T     Q + I N Y P G      
Sbjct: 61  SHYGVAFLAKKEPLSVTMGFPTDEEDAQRRMIILKTTDDAGQPVTILNGYFPQGENEKHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175
           TKY  K  + K  + +  +    E+ +I  GD NI           +     +      F
Sbjct: 121 TKYPAKRKFYKDLMTYLDENHTPEDNVIVMGDVNISHTDLDIGIGEENRKRWLRTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R+    L + GF D+ R  +   +  +S++DY +  ++ N+G+RID I+ +    S
Sbjct: 181 LPEEREWLNTLFSWGFEDSFRTLNPETNERFSWFDYRSKGFNDNRGLRIDLILATKSLHS 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
            L  A ID + RG  KPSDH P+     
Sbjct: 241 TLVDAGIDYELRGIEKPSDHAPIWAEYK 268


>gi|254805570|ref|YP_003083791.1| exodeoxyribonuclease III [Neisseria meningitidis alpha14]
 gi|254669112|emb|CBA07713.1| exodeoxyribonuclease III [Neisseria meningitidis alpha14]
          Length = 256

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 91/260 (35%), Positives = 134/260 (51%), Gaps = 4/260 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + TWNVNS+  R+  +   + +N PDI+ LQE K +   FP   LQ + +H    GQK
Sbjct: 1   MKITTWNVNSLNVRLPQVQNLLADNPPDILVLQELKLDQDKFPAAALQMMGWHCVWSGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAI+S+  P ++   LP    D Q R I AT       +R+ N+Y  +G  + S K
Sbjct: 61  TYNGVAIVSRNAPEDVHIGLPALPDDPQRRVIAATVGG----VRVINVYCVNGEALDSPK 116

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K  W      F    +     L+  GD+NI P   DCY+P  W      +   RQ F
Sbjct: 117 FKYKEQWFAALTEFVRDEMARHGKLVLLGDFNIAPADADCYDPEKWYEKIHCSTVERQWF 176

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q L ++G TD++R  H     Y+++DY    + +  G+RIDHI++SP   + L   R+D 
Sbjct: 177 QNLLDLGLTDSLRHIHPEGAFYTWFDYRGAMFQRKLGLRIDHILVSPAMAAALKDVRVDL 236

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
           + R   +PSDH PV    D 
Sbjct: 237 ETRALERPSDHAPVTAEFDW 256


>gi|268589456|ref|ZP_06123677.1| exodeoxyribonuclease III [Providencia rettgeri DSM 1131]
 gi|291315121|gb|EFE55574.1| exodeoxyribonuclease III [Providencia rettgeri DSM 1131]
          Length = 270

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 86/269 (31%), Positives = 129/269 (47%), Gaps = 8/269 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H LAA I+++ P++I LQETK  D  FP+E +  L YH+   GQK
Sbjct: 1   MKFISFNINGLRARPHQLAAIIEKHQPEVIGLQETKVHDDMFPYEEVSQLGYHVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122
           ++ GVA+L+K +P+ +    P DD D Q R I A    +   L + N Y P G       
Sbjct: 61  AHYGVALLTKNEPLAVRKGFPTDDDDAQRRIIMADIQTDRGPLTVVNGYFPQGESRDHPT 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  + +    + +     E  L+  GD NI P               +      F 
Sbjct: 121 KFPAKEKFYQDLQNYITSTQTAESQLLIMGDMNISPTDLDIGIGDANRKRWLKTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+   KL   G  D  RA +      YS++DY +  +  N+G+RID ++ S +    
Sbjct: 181 PEEREWLAKLLGWGLVDTYRAKNPDISDCYSWFDYRSKGFDDNRGLRIDLLLASNKLAER 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
             +  ID + RG  KPSDH PV    D+ 
Sbjct: 241 CIATGIDYEIRGMEKPSDHAPVWSEFDLS 269


>gi|194433512|ref|ZP_03065790.1| exodeoxyribonuclease III [Shigella dysenteriae 1012]
 gi|194418275|gb|EDX34366.1| exodeoxyribonuclease III [Shigella dysenteriae 1012]
 gi|320181218|gb|EFW56137.1| Exodeoxyribonuclease III [Shigella boydii ATCC 9905]
 gi|332085670|gb|EGI90834.1| exodeoxyribonuclease III [Shigella dysenteriae 155-74]
 gi|332090564|gb|EGI95661.1| exodeoxyribonuclease III [Shigella boydii 5216-82]
          Length = 268

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 79/266 (29%), Positives = 124/266 (46%), Gaps = 8/266 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A ++++ PD+I LQETK  D  FP E +  L Y++   GQK
Sbjct: 1   MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            + GVA+L+K  PI +    PGDD + Q R I A        + + N Y P G       
Sbjct: 61  GHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSPLGNVTVINGYFPQGESRDHPI 120

Query: 124 -YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
            +  K  + +    +    L+ E P++  GD NI P         +     +      F 
Sbjct: 121 KFPAKAQFYQNLQNYLEAELKRENPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+  ++L + G  D  R  +      +S++DY +  +  N+G+RID ++ S      
Sbjct: 181 PEEREWMERLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAEC 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
                ID + R   KPSDH PV  + 
Sbjct: 241 CVETGIDYEIRSMEKPSDHAPVWATF 266


>gi|170768737|ref|ZP_02903190.1| exodeoxyribonuclease III [Escherichia albertii TW07627]
 gi|170122285|gb|EDS91216.1| exodeoxyribonuclease III [Escherichia albertii TW07627]
          Length = 268

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 80/266 (30%), Positives = 123/266 (46%), Gaps = 8/266 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A ++++ PD+I LQETK  D  FP E +  L Y++   GQK
Sbjct: 1   MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122
            + GVA+L+K  PI +    PGD  D Q R I A        + + N Y P G       
Sbjct: 61  GHYGVALLTKETPITVRRGFPGDGEDAQRRIIMAEIPSPLGNVTVINGYFPQGESRDHPT 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  +      +    L+ E P++  GD NI P         +     +      F 
Sbjct: 121 KFPAKAQFYLNLQNYLETELKRENPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+  ++L + G  D  R  +      +S++DY +  +  N+G+RID ++ S      
Sbjct: 181 PEEREWMERLLSWGLVDTFRHANPETADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAEC 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
                ID + R   KPSDH PV  + 
Sbjct: 241 CVETGIDYEIRSMEKPSDHAPVWATF 266


>gi|331683257|ref|ZP_08383858.1| exodeoxyribonuclease III [Escherichia coli H299]
 gi|331079472|gb|EGI50669.1| exodeoxyribonuclease III [Escherichia coli H299]
          Length = 268

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 78/266 (29%), Positives = 124/266 (46%), Gaps = 8/266 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A ++++ PD+I LQETK  D  FP E +  L Y++   GQK
Sbjct: 1   MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            + GVA+++K  PI +    PGDD + Q R I A        + + N Y P G       
Sbjct: 61  GHYGVALMTKETPIAVRRGFPGDDEEAQRRIIMAEIPSPLGNVTVINGYFPQGESRDHPI 120

Query: 124 -YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
            +  K  + +    +    L+ E P++  GD NI P         +     +      F 
Sbjct: 121 KFPAKAQFYQNLQNYLETELKRENPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+  ++L + G  D  R  +      +S++DY +  +  N+G+RID ++ S      
Sbjct: 181 PEEREWMERLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAEC 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
                ID + R   KPSDH PV  + 
Sbjct: 241 CVETGIDYEIRSMEKPSDHAPVWATF 266


>gi|269102062|ref|ZP_06154759.1| exodeoxyribonuclease III [Photobacterium damselae subsp. damselae
           CIP 102761]
 gi|268161960|gb|EEZ40456.1| exodeoxyribonuclease III [Photobacterium damselae subsp. damselae
           CIP 102761]
          Length = 268

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 85/268 (31%), Positives = 134/268 (50%), Gaps = 9/268 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V ++N+N +RAR+H L A I+++ PD+I LQE K  D+ FP   ++++ Y +   GQK
Sbjct: 1   MKVISFNINGLRARLHQLQALIEKHQPDVIGLQEIKVHDEAFPLADVEAMGYKVYHHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLD-VQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121
           ++ GVA+L K +PIE+    P DD D  +   +      N + + I N Y P G+ I   
Sbjct: 61  AHYGVALLCKQEPIEVKKGFPTDDDDAQRRMIMATFEQENGKKITIMNGYFPQGDNINHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175
           TK+  K  +    + + +     +E LI  GD NI P         +     +      F
Sbjct: 121 TKFPAKEKFYADLMTYLNTYHNNDEELIVMGDINISPIDLDIGIGDNNAKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
               RQ  + L + GF D  R  H T    YS++DY +  +  N+G+RID I+ +P    
Sbjct: 181 QPIERQWLKTLLDWGFIDTFRQLHPTVDDQYSWFDYRSKGFDDNRGLRIDVILATPSLAE 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
               + ID + RG  KPSDH P+  + +
Sbjct: 241 RCIESGIDYELRGIEKPSDHAPIWSTFN 268


>gi|241758932|ref|ZP_04757044.1| exodeoxyribonuclease III [Neisseria flavescens SK114]
 gi|241320753|gb|EER56986.1| exodeoxyribonuclease III [Neisseria flavescens SK114]
          Length = 256

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 91/259 (35%), Positives = 137/259 (52%), Gaps = 4/259 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+  R+  +  W+ ++  DI+ LQE K +   FP   LQ + +H    GQK
Sbjct: 1   MKIATWNVNSLNVRLPQVQNWLADHQADILALQELKLDQDKFPAAALQMMGWHCVWSGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAI+S+++P ++   LP    D Q R I AT       +R+ N+Y  +G  + S K
Sbjct: 61  TYNGVAIISRHEPQDVHCGLPALPDDPQRRVIAATING----VRVINVYCINGEALDSPK 116

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K  W      F    +     L+  GD+NI P   DCY+P  W      +   RQ F
Sbjct: 117 FQYKEQWFAALTEFVRNEMAAHPKLVLLGDFNIAPADADCYDPEKWHEKIHCSSIERQWF 176

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + L ++G TD +R  H     Y+++DY    + +  G+RIDHI+ SPE  + L +  +D 
Sbjct: 177 KNLLDLGLTDGLRKIHPEGAFYTWFDYRGAMFQRKLGLRIDHILTSPELAATLTNVTVDL 236

Query: 244 KPRGWTKPSDHTPVIVSLD 262
           + R   +PSDH PVI   D
Sbjct: 237 ETRAQERPSDHAPVIAEFD 255


>gi|15676313|ref|NP_273448.1| exodeoxyribonuclease III [Neisseria meningitidis MC58]
 gi|134104765|pdb|2JC4|A Chain A, 3'-5' Exonuclease (Nexo) From Neisseria Meningitidis
 gi|7225621|gb|AAF40839.1| exodeoxyribonuclease III [Neisseria meningitidis MC58]
 gi|316984902|gb|EFV63858.1| exodeoxyribonuclease III [Neisseria meningitidis H44/76]
 gi|325134978|gb|EGC57610.1| exodeoxyribonuclease III [Neisseria meningitidis M13399]
 gi|325140915|gb|EGC63422.1| exodeoxyribonuclease III [Neisseria meningitidis CU385]
 gi|325199589|gb|ADY95044.1| exodeoxyribonuclease III [Neisseria meningitidis H44/76]
          Length = 256

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 91/260 (35%), Positives = 135/260 (51%), Gaps = 4/260 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + TWNVNS+  R+  +   + +N PDI+ LQE K +   FP   LQ + +H    GQK
Sbjct: 1   MKITTWNVNSLNVRLPQVQNLLADNPPDILVLQELKLDQDKFPAAALQMMGWHCVWSGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAI+S+  P ++   LP    D Q R I AT +     +R+ N+Y  +G  + S K
Sbjct: 61  TYNGVAIVSRSVPQDVHFGLPALPDDPQRRVIAATVSG----VRVINVYCVNGEALDSPK 116

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K  W      F    +     L+  GD+NI P   DCY+P  W      +   RQ F
Sbjct: 117 FKYKEQWFAALTEFVRDEMTRHGKLVLLGDFNIAPADADCYDPEKWHEKIHCSSVERQWF 176

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q L ++G TD++R  H     Y+++DY    + +  G+RIDHI++SP   + L   R+D 
Sbjct: 177 QNLLDLGLTDSLRQVHPEGAFYTWFDYRGAMFQRKLGLRIDHILVSPAMAAALKDVRVDL 236

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
           + R   +PSDH PV    D 
Sbjct: 237 ETRALERPSDHAPVTAEFDW 256


>gi|123442505|ref|YP_001006482.1| exonuclease III [Yersinia enterocolitica subsp. enterocolitica
           8081]
 gi|122089466|emb|CAL12314.1| exodeoxyribonuclease III [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 268

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 84/268 (31%), Positives = 128/268 (47%), Gaps = 8/268 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H LAA I+++ PD+I LQETK  D  FP E +    YH+   GQK
Sbjct: 1   MKFVSFNINGLRARPHQLAAIIEQHQPDVIGLQETKVHDDMFPLEEVSQHGYHVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            + GVA+L+K +P+ I    P D+ D Q R I A        L + N Y P G       
Sbjct: 61  GHYGVALLTKNEPLAIRRGFPTDEEDAQRRIIMADIATPQGPLTVINGYFPQGESRDHPI 120

Query: 124 -YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
            +  K  +     ++  Q+L  +  ++  GD NI P         D     +      F 
Sbjct: 121 KFPAKERFYADLQQYLEQQLSADAQVLIMGDLNISPTDLDIGIGEDSRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R   ++LQN G  D  RA +   +  +S++DY +  + +N+G+RID ++ S    + 
Sbjct: 181 PEERAWLERLQNWGLVDTFRAANPDCNDQFSWFDYRSRGFDENRGLRIDLLLASRPLAAR 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             +  ID   R   KPSDH PV     +
Sbjct: 241 CIATGIDYDIRSMEKPSDHAPVWSEFAL 268


>gi|330941805|gb|EGH44552.1| exonuclease III [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 270

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 90/269 (33%), Positives = 135/269 (50%), Gaps = 11/269 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +RAR H LAA I ++ PD+I LQETK  D+ FP   +++L YH+   GQK
Sbjct: 1   MKIVSFNINGLRARPHQLAALIDKHQPDVIGLQETKVSDEQFPQAEVEALGYHVHFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122
            + GVA+LS+  P+ +     GDD D Q RFI  T+   N Q + I N Y P G      
Sbjct: 61  GHYGVALLSRNAPLALHKGFEGDDEDSQKRFIWGTYADSNGQPVTIMNGYFPQGESRDHP 120

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175
            K+  K  + +        +   ++PLI  GD NI PQ        D     +      F
Sbjct: 121 TKFPAKRRFYENLQTLLEGQFRNDQPLIVMGDVNISPQDCDIGIGADNAKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232
             E R+  ++L+N G  D+ R  +      +S++DY +  +     +G+RID IM S   
Sbjct: 181 LPEEREWMERLKNWGLVDSFRHLYPEVVDRFSWFDYRSRGFEDEPKRGLRIDLIMTSSGL 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
              +  A +D   RG  KPSDH P+ + L
Sbjct: 241 QPRIKEAGVDYDLRGMEKPSDHAPIWLEL 269


>gi|205352972|ref|YP_002226773.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|207857189|ref|YP_002243840.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|205272753|emb|CAR37670.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|206708992|emb|CAR33322.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|326628046|gb|EGE34389.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 9]
          Length = 268

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 77/268 (28%), Positives = 122/268 (45%), Gaps = 8/268 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A ++++ PD+I LQETK  D+ FP E +  L Y++   GQK
Sbjct: 1   MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDEMFPLEEVAKLGYNVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122
            + GVA+L+K  PI +    P D  + Q R I A        + + N Y P G       
Sbjct: 61  GHYGVALLTKATPISVRRGFPDDGEEAQRRIIMAEIPSPLGNITVINGYFPQGENRDHPL 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  + +    +    L+ + P++  GD NI P         +     +      F 
Sbjct: 121 KFPAKAQFYQNLQNYLETELKCDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+   +L   G  D  R  +      +S++DY +  +  N+G+RID ++ S      
Sbjct: 181 PEEREWMSRLLKWGLVDTFRQANPQTMDKFSWFDYRSKGFVDNRGLRIDLLLASAPLAER 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                ID   R   KPSDH PV  +  +
Sbjct: 241 CAETGIDYDIRSMEKPSDHAPVWATFRV 268


>gi|116050489|ref|YP_790692.1| exonuclease III [Pseudomonas aeruginosa UCBPP-PA14]
 gi|296389031|ref|ZP_06878506.1| exonuclease III [Pseudomonas aeruginosa PAb1]
 gi|313107448|ref|ZP_07793636.1| exodeoxyribonuclease III [Pseudomonas aeruginosa 39016]
 gi|115585710|gb|ABJ11725.1| exodeoxyribonuclease III [Pseudomonas aeruginosa UCBPP-PA14]
 gi|310880138|gb|EFQ38732.1| exodeoxyribonuclease III [Pseudomonas aeruginosa 39016]
          Length = 270

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 87/269 (32%), Positives = 130/269 (48%), Gaps = 11/269 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +RAR H LAA I+ + PD+I LQETK  D  FP   +++L YH+   GQK
Sbjct: 1   MKIVSFNINGLRARPHQLAALIERHQPDVIGLQETKVADDQFPQAEIEALGYHVHYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122
            + GVA+LS+  P+E+    P D  + Q RFI  TF       + + N Y P G      
Sbjct: 61  GHYGVALLSRQAPLELHRGFPSDGEESQRRFIWGTFSDAQGNPITVMNGYFPQGENREHP 120

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175
            K+  K  +            + E+ L+  GD NI P+  D           +      F
Sbjct: 121 TKFPAKQRFYADLQSLLENSFKPEQALVVMGDINISPEDCDIGIGEENRKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232
             E R+    L+N G  D+ RA +   +  +S++DY +  +     +G+RID I+ S   
Sbjct: 181 LPEEREWLATLKNWGLVDSFRALNPEVNDRFSWFDYRSRGFEDTPKRGLRIDVILASRVL 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
            S    A ID   RG  KPSDH P+ + L
Sbjct: 241 QSRFKDAGIDYDLRGMEKPSDHAPIWLEL 269


>gi|224584182|ref|YP_002637980.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|224468709|gb|ACN46539.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
          Length = 268

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 77/268 (28%), Positives = 121/268 (45%), Gaps = 8/268 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A ++++ PD+I LQETK  D+ FP E +  L Y++   GQK
Sbjct: 1   MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDEMFPLEEVAKLGYNVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122
            + GVA+L+K  PI +    P D  + Q R I A        + + N Y P G       
Sbjct: 61  GHYGVALLTKATPISVRRGFPDDGEEAQRRIIMAEIPSPLGNITVINGYFPQGESRDHPL 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  + +    +    L+   P++  GD NI P         +     +      F 
Sbjct: 121 KFPAKAQFYQNLQNYLETELKCNNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+   +L   G  D  R  +      +S++DY +  +  N+G+RID ++ S      
Sbjct: 181 PEEREWMSRLLKWGLVDTFRQANPQTMDKFSWFDYRSKGFVDNRGLRIDLLLASAPLAER 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                ID   R   KPSDH PV  +  +
Sbjct: 241 CAETGIDYDIRSMEKPSDHAPVWATFRV 268


>gi|269138847|ref|YP_003295548.1| exonuclease III [Edwardsiella tarda EIB202]
 gi|267984508|gb|ACY84337.1| exonuclease III [Edwardsiella tarda EIB202]
 gi|304558837|gb|ADM41501.1| Exodeoxyribonuclease III [Edwardsiella tarda FL6-60]
          Length = 269

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 81/269 (30%), Positives = 124/269 (46%), Gaps = 8/269 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H LAA +++++PD+I LQETK  D  FP + L  L YH+   GQK
Sbjct: 1   MKFISFNINGLRARPHQLAAIVEKHSPDVIGLQETKVHDDMFPLQDLAQLGYHLHYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            + GVA+L++  P+ +    PGDD + Q R I A       TL + N Y P G       
Sbjct: 61  GHYGVALLTRMAPLAVRKGFPGDDAEAQRRIIMADIPTELGTLTVINGYFPQGESRDHPI 120

Query: 124 -YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC------YNPIIWENDACFT 176
            +  K  +     R+    L  + P++  GD NI P+  D           +      F 
Sbjct: 121 KFPAKSKFYADLQRYLQDALSPQNPVLIMGDMNITPRDIDIGIGEDSRRRWLRSGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHL-YSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+   +L   G  D  R  +      +S++DY +  +  N+G+RID ++ S      
Sbjct: 181 PEEREWLDRLLAWGLVDTYRQANPQGDERFSWFDYRSKGFDDNRGLRIDLLLASQPLAQR 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
                ID   R   KPSDH P+     + 
Sbjct: 241 CTDTGIDYAIRAMEKPSDHAPIWAEFALS 269


>gi|16760593|ref|NP_456210.1| exonuclease III [Salmonella enterica subsp. enterica serovar Typhi
           str. CT18]
 gi|16764653|ref|NP_460268.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|29141647|ref|NP_804989.1| exonuclease III [Salmonella enterica subsp. enterica serovar Typhi
           str. Ty2]
 gi|56413712|ref|YP_150787.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|161614297|ref|YP_001588262.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Paratyphi B str. SPB7]
 gi|167552346|ref|ZP_02346099.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|167991882|ref|ZP_02572981.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|168233217|ref|ZP_02658275.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|168238968|ref|ZP_02664026.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|168244409|ref|ZP_02669341.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|168263883|ref|ZP_02685856.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|194446222|ref|YP_002040559.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|194449710|ref|YP_002045308.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|194471225|ref|ZP_03077209.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194733972|ref|YP_002114319.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|197250009|ref|YP_002146737.1| exonuclease III [Salmonella enterica subsp. enterica serovar Agona
           str. SL483]
 gi|197264133|ref|ZP_03164207.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197362635|ref|YP_002142272.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
 gi|198244728|ref|YP_002215824.1| exonuclease III [Salmonella enterica subsp. enterica serovar Dublin
           str. CT_02021853]
 gi|200389740|ref|ZP_03216351.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|204927863|ref|ZP_03219064.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|213023056|ref|ZP_03337503.1| exonuclease III [Salmonella enterica subsp. enterica serovar Typhi
           str. 404ty]
 gi|213162974|ref|ZP_03348684.1| exonuclease III [Salmonella enterica subsp. enterica serovar Typhi
           str. E00-7866]
 gi|213427783|ref|ZP_03360533.1| exonuclease III [Salmonella enterica subsp. enterica serovar Typhi
           str. E02-1180]
 gi|213581312|ref|ZP_03363138.1| exonuclease III [Salmonella enterica subsp. enterica serovar Typhi
           str. E98-0664]
 gi|213612544|ref|ZP_03370370.1| exonuclease III [Salmonella enterica subsp. enterica serovar Typhi
           str. E98-2068]
 gi|213648612|ref|ZP_03378665.1| exonuclease III [Salmonella enterica subsp. enterica serovar Typhi
           str. J185]
 gi|213850398|ref|ZP_03381296.1| exonuclease III [Salmonella enterica subsp. enterica serovar Typhi
           str. M223]
 gi|60392242|sp|P0A1A9|EX3_SALTY RecName: Full=Exodeoxyribonuclease III; Short=EXO III;
           Short=Exonuclease III; AltName: Full=AP endonuclease VI
 gi|60392243|sp|P0A1B0|EX3_SALTI RecName: Full=Exodeoxyribonuclease III; Short=EXO III;
           Short=Exonuclease III; AltName: Full=AP endonuclease VI
 gi|25289127|pir||AC0710 exodeoxyribonuclease III (EC 3.1.11.2) [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|4324669|gb|AAD16979.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Typhimurium]
 gi|16419819|gb|AAL20227.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|16502889|emb|CAD02052.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29137275|gb|AAO68838.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|56127969|gb|AAV77475.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|161363661|gb|ABX67429.1| hypothetical protein SPAB_02042 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194404885|gb|ACF65107.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194408014|gb|ACF68233.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194457589|gb|EDX46428.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194709474|gb|ACF88695.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197094112|emb|CAR59612.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|197213712|gb|ACH51109.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197242388|gb|EDY25008.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197288283|gb|EDY27668.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|197939244|gb|ACH76577.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|199602185|gb|EDZ00731.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|204323205|gb|EDZ08401.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|205323022|gb|EDZ10861.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|205329685|gb|EDZ16449.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|205332615|gb|EDZ19379.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|205336751|gb|EDZ23515.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|205347536|gb|EDZ34167.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|261246511|emb|CBG24321.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267993174|gb|ACY88059.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 14028S]
 gi|301157839|emb|CBW17333.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312912288|dbj|BAJ36262.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Typhimurium str. T000240]
 gi|321223927|gb|EFX48990.1| Exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|322616690|gb|EFY13599.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315996572]
 gi|322619793|gb|EFY16667.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-1]
 gi|322622362|gb|EFY19207.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-3]
 gi|322627886|gb|EFY24676.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-4]
 gi|322633016|gb|EFY29759.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-1]
 gi|322636738|gb|EFY33441.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-2]
 gi|322641236|gb|EFY37877.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. 531954]
 gi|322645225|gb|EFY41754.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. NC_MB110209-0054]
 gi|322650167|gb|EFY46581.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. OH_2009072675]
 gi|322655740|gb|EFY52042.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. CASC_09SCPH15965]
 gi|322660066|gb|EFY56305.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. 19N]
 gi|322665367|gb|EFY61555.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. 81038-01]
 gi|322669646|gb|EFY65793.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. MD_MDA09249507]
 gi|322673551|gb|EFY69653.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. 414877]
 gi|322677477|gb|EFY73541.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. 366867]
 gi|322679858|gb|EFY75897.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. 413180]
 gi|322687330|gb|EFY83302.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. 446600]
 gi|323129573|gb|ADX17003.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 4/74]
 gi|323192448|gb|EFZ77678.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609458-1]
 gi|323198697|gb|EFZ83798.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556150-1]
 gi|323204125|gb|EFZ89139.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609460]
 gi|323208743|gb|EFZ93681.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. 507440-20]
 gi|323210257|gb|EFZ95156.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556152]
 gi|323217719|gb|EGA02434.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB101509-0077]
 gi|323220274|gb|EGA04729.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB102109-0047]
 gi|323227561|gb|EGA11719.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB110209-0055]
 gi|323229522|gb|EGA13645.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB111609-0052]
 gi|323232745|gb|EGA16841.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009083312]
 gi|323240216|gb|EGA24260.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009085258]
 gi|323242796|gb|EGA26817.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315731156]
 gi|323249113|gb|EGA33032.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2009159199]
 gi|323254387|gb|EGA38204.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008282]
 gi|323257176|gb|EGA40879.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008283]
 gi|323263503|gb|EGA47031.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008284]
 gi|323267084|gb|EGA50569.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008285]
 gi|323271592|gb|EGA55013.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008287]
 gi|326623571|gb|EGE29916.1| exonuclease III [Salmonella enterica subsp. enterica serovar Dublin
           str. 3246]
          Length = 268

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 77/268 (28%), Positives = 122/268 (45%), Gaps = 8/268 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A ++++ PD+I LQETK  D+ FP E +  L Y++   GQK
Sbjct: 1   MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDEMFPLEEVAKLGYNVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122
            + GVA+L+K  PI +    P D  + Q R I A        + + N Y P G       
Sbjct: 61  GHYGVALLTKATPISVRRGFPDDGEEAQRRIIMAEIPSPLGNITVINGYFPQGESRDHPL 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  + +    +    L+ + P++  GD NI P         +     +      F 
Sbjct: 121 KFPAKAQFYQNLQNYLETELKCDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+   +L   G  D  R  +      +S++DY +  +  N+G+RID ++ S      
Sbjct: 181 PEEREWMSRLLKWGLVDTFRQANPQTMDKFSWFDYRSKGFVDNRGLRIDLLLASAPLAER 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                ID   R   KPSDH PV  +  +
Sbjct: 241 CAETGIDYDIRSMEKPSDHAPVWATFRV 268


>gi|325205470|gb|ADZ00923.1| exodeoxyribonuclease III [Neisseria meningitidis M04-240196]
          Length = 256

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 91/260 (35%), Positives = 134/260 (51%), Gaps = 4/260 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + TWNVNS+  R+  +   + +N PDI+ LQE K +   FP   LQ + +H    GQK
Sbjct: 1   MKITTWNVNSLNVRLPQVQNLLADNPPDILVLQELKLDQDKFPAAALQMMGWHCVWSGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAI+S+  P ++   LP    D Q R I AT       +R+ N+Y  +G  I S K
Sbjct: 61  TYNGVAIVSRSVPEDVHFGLPSLPDDPQRRVIAATVGG----VRVINVYCVNGEAIDSPK 116

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K  W      F    +     L+  GD+NI P   DCY+P  W      +   RQ F
Sbjct: 117 FKYKEQWFAALTEFVRDEMARHGKLVLLGDFNIAPADADCYDPEKWHEKIHCSSVERQWF 176

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + L ++G TD++R  H     Y+++DY    + +  G+RIDHI++SP   + L   R+D 
Sbjct: 177 KNLLDLGLTDSLRQVHPEGAFYTWFDYRGAMFQRKLGLRIDHILVSPAMAAALKDVRVDL 236

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
           + R   +PSDH PV    D 
Sbjct: 237 ETRALERPSDHAPVTAEFDW 256


>gi|194292799|ref|YP_002008706.1| exodeoxyribonuclease iii, ap endonuclease, family 1 [Cupriavidus
           taiwanensis LMG 19424]
 gi|193226703|emb|CAQ72654.1| Exodeoxyribonuclease III, AP endonuclease, family 1 [Cupriavidus
           taiwanensis LMG 19424]
          Length = 270

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 109/261 (41%), Positives = 153/261 (58%), Gaps = 5/261 (1%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           S + +AT+N+N IR+R+  L  W+    PDI+CLQE KT D++FP   ++   Y     G
Sbjct: 4   STLKIATFNINGIRSRVGALCHWLAREAPDIVCLQELKTADESFPAREIRDAGYGAIWHG 63

Query: 62  QKSYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           QKS+NGVAIL++  +P+E+   LPGD  D  +R++EA  +     L I  LYLP+GNP  
Sbjct: 64  QKSWNGVAILARGEEPVEVRRGLPGDPDDSHSRYLEAAVSG----LLIACLYLPNGNPQP 119

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             K+D K++W +R +  A +      P++ AGDYN++P   D YNP  W  DA    E R
Sbjct: 120 GPKFDYKLAWFERLIAHAQELFGSGHPVVLAGDYNVVPTDQDIYNPRSWRKDALLQPESR 179

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            ++ +L   G+TDA+R  H    +Y+FWDY+   W  N G+RIDHI+LS E    L  A 
Sbjct: 180 DAYARLLAQGWTDALRQRHPDAPVYTFWDYFRQHWQTNSGLRIDHILLSAELAPRLRDAG 239

Query: 241 IDTKPRGWTKPSDHTPVIVSL 261
           +D   RG   PSDH P  V L
Sbjct: 240 VDRWVRGEDHPSDHAPAWVVL 260


>gi|330503248|ref|YP_004380117.1| exonuclease III [Pseudomonas mendocina NK-01]
 gi|328917534|gb|AEB58365.1| exonuclease III [Pseudomonas mendocina NK-01]
          Length = 270

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 83/270 (30%), Positives = 135/270 (50%), Gaps = 11/270 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +RAR H L A I+++ PD+I LQETK  D+ FP   ++ L YH+   GQK
Sbjct: 1   MKIVSFNINGLRARPHQLQALIEKHQPDVIGLQETKVADEQFPEAEIRQLGYHVHYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122
            + GVA+LS+ +P+ +    PGD  D Q RFI  TF   +   + + N Y P G      
Sbjct: 61  GHYGVALLSRQEPLSLHKGFPGDGEDSQRRFIYGTFADASGNPITVMNGYFPQGESRDHP 120

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175
            K+  K  +     +   +R + ++ L+  GD NI P+              +      F
Sbjct: 121 VKFPAKQRFYADLQQLLVERFDPQQALVVMGDINISPEDCDIGIGEPNRLRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232
             E R+    L++ G  D+ R  +   +  +S++DY +  +     +G+RID I+ S + 
Sbjct: 181 LPEEREWLATLKSWGLVDSFRHLNPEVNDRFSWFDYRSRGFEDEPKRGLRIDVILASQQL 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
            +    A ID   RG  KPSDH P+ + L+
Sbjct: 241 QARFKDAGIDYDLRGMDKPSDHAPIWLELN 270


>gi|114570470|ref|YP_757150.1| exodeoxyribonuclease III [Maricaulis maris MCS10]
 gi|114340932|gb|ABI66212.1| Exodeoxyribonuclease III [Maricaulis maris MCS10]
          Length = 262

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 123/261 (47%), Positives = 167/261 (63%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
            +TVA+WNVNS++AR+ N+  W+ E  PD+ CLQE KT D+ FP   ++ L Y+IET GQ
Sbjct: 2   TLTVASWNVNSVKARLPNVLDWLSEAKPDVACLQEIKTVDEGFPRMEIEDLGYNIETHGQ 61

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           KSYNGVAILSK+   E+   LPGD+ D QAR+IEA        +R+ ++YLP+GNP    
Sbjct: 62  KSYNGVAILSKHPIEELRCGLPGDESDEQARYIEAVIAAEGGPVRVASIYLPNGNPAPGP 121

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           KYD K++W++R  R A   L  EEPLI AGDYN IP+  DC++   WE+DA    + R +
Sbjct: 122 KYDYKLAWMERLRRHAQNLLTFEEPLILAGDYNCIPRDSDCWDIAEWESDALALPQTRAA 181

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F+ L+ +G T+A        H Y+F+DY A  W+K  GIRIDH++ SP+A   L    I 
Sbjct: 182 FRALKWLGLTEAFEQLDGRGHQYTFYDYQAGRWNKGHGIRIDHLLCSPQAADHLEGIEIH 241

Query: 243 TKPRGWTKPSDHTPVIVSLDI 263
           TK RG  K SDH P++ S  +
Sbjct: 242 TKTRGKEKASDHIPIVGSFSL 262


>gi|34496332|ref|NP_900547.1| exodeoxyribonuclease III [Chromobacterium violaceum ATCC 12472]
 gi|34102184|gb|AAQ58551.1| exodeoxyribonuclease III [Chromobacterium violaceum ATCC 12472]
          Length = 257

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 83/260 (31%), Positives = 135/260 (51%), Gaps = 7/260 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +  ATWNVNS++ R+  +  W+ E   +++CLQE K +   FP   +++  Y     GQK
Sbjct: 1   MRFATWNVNSLKVRLPQVLQWLAETGVEVLCLQELKMDQGAFPLAEIEAAGYRAVWFGQK 60

Query: 64  SYNGVAI--LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +YNGVAI   +  +  ++V  +PG   + +              +R+   Y  +G  + S
Sbjct: 61  TYNGVAILARTPLEMTDVVAGIPGYGDEQRRVIAATVNG-----VRVICGYFVNGEAVDS 115

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            KY  K+ W+ +   + +  L     L+  GDYNI P+  D Y+P  W      +   R 
Sbjct: 116 PKYPYKLEWLSKLEGYVAAELARHPQLLLLGDYNIAPEDRDVYDPEGWREQVLCSTPERD 175

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           +F++L  +G +D+ R  +     YS+WDY    + +NKG+RIDHI++S        +  I
Sbjct: 176 AFRRLIALGLSDSFRLFNQEEKQYSWWDYRQMMFRRNKGVRIDHILVSDALKPRAQACEI 235

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
           D  PR W +PSDHTPV+++L
Sbjct: 236 DKAPRKWERPSDHTPVVLTL 255


>gi|85711701|ref|ZP_01042758.1| Exonuclease III [Idiomarina baltica OS145]
 gi|85694561|gb|EAQ32502.1| Exonuclease III [Idiomarina baltica OS145]
          Length = 269

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 81/269 (30%), Positives = 128/269 (47%), Gaps = 9/269 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N IRAR+H L A I ++ PD+I LQETK  D  FP + ++ + YH+   GQK
Sbjct: 1   MKFISFNINGIRARLHQLQAMIDKHQPDVIGLQETKVHDDQFPQQAVEDMGYHVNFFGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI-NTQTLRIGNLYLPHGNPITST 122
            + GVA+LSK     +    P +  D Q R I   + + +  T+R+ N Y P G      
Sbjct: 61  GHYGVALLSKKPLTNVQKGFPNEPEDAQRRMIMGDYPLDDGATVRVLNGYFPQGESRDHP 120

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175
            K+  K  + +  + + +  L  E+P+I  GD NI  Q  D           +      F
Sbjct: 121 TKFPMKAQFYRDLINYLNDDLSPEQPVIVMGDMNISHQDRDIGIGETNAKRWLRTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHH-LYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R    ++ + G  D  R  +      +S++DY +  +  N+G+RID I+ +     
Sbjct: 181 LPEERDWLNEVLDWGLIDTYRTLNPEQDNEFSWFDYRSRGFDDNRGLRIDLILATQTLAD 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
               + ID + RG  KPSDH P+     I
Sbjct: 241 RCEESGIDYELRGIEKPSDHAPIWSQFSI 269


>gi|110641869|ref|YP_669599.1| exonuclease III [Escherichia coli 536]
 gi|300987545|ref|ZP_07178252.1| exodeoxyribonuclease III [Escherichia coli MS 200-1]
 gi|110343461|gb|ABG69698.1| exodeoxyribonuclease III [Escherichia coli 536]
 gi|300306115|gb|EFJ60635.1| exodeoxyribonuclease III [Escherichia coli MS 200-1]
 gi|324011528|gb|EGB80747.1| exodeoxyribonuclease III [Escherichia coli MS 60-1]
          Length = 272

 Score =  203 bits (517), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 79/268 (29%), Positives = 125/268 (46%), Gaps = 8/268 (2%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + +   ++N+N +RAR H L A ++++ PD+I LQETK  D  FP E +  L Y++   G
Sbjct: 3   ATMKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDVMFPLEEVAKLGYNVFYHG 62

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           QK + GVA+L+K  PI +    PGDD + Q R I A        + + N Y P G     
Sbjct: 63  QKGHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSPLGNVTVINGYFPQGESRDH 122

Query: 122 TK-YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDAC 174
              +  K  + +    +    L+ E P++  GD NI P         +     +      
Sbjct: 123 PIKFPAKAQFYQNLQNYLETELKRENPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCS 182

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
           F  E R+  ++L + G  D  R  +      +S++DY +  +  N+G+RID ++ S    
Sbjct: 183 FLPEEREWMERLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLA 242

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSL 261
                  ID + R   KPSDH PV  + 
Sbjct: 243 ECCVETGIDYEIRSMEKPSDHAPVWATF 270


>gi|262043063|ref|ZP_06016204.1| exodeoxyribonuclease III [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259039595|gb|EEW40725.1| exodeoxyribonuclease III [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 268

 Score =  203 bits (516), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 82/266 (30%), Positives = 126/266 (47%), Gaps = 8/266 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H LAA ++++ PD+I LQETK  D  FP E +  L Y++   GQK
Sbjct: 1   MKFVSFNINGLRARPHQLAAIVEKHQPDVIGLQETKVHDDMFPLEEVARLGYNVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122
            + GVA+L+K  PI +    P D  + Q R I A        + + N Y P G      T
Sbjct: 61  GHYGVALLTKETPITVRRGFPDDGEEAQRRIIMAEIPSPFGNVTVINGYFPQGESRDHET 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K ++ +    +    L  E P++  GD NI P         +     +      F 
Sbjct: 121 KFPAKAAFYQNLQNYLETELNKENPVLIMGDMNISPTDLDIGIGEENRKRWLLTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHH-LYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+   +L   G  D  R  +  +H  +S++DY +  +  N+G+RID ++ S      
Sbjct: 181 PEEREWMDRLLGWGLVDTWRQANPDNHEHFSWFDYRSKGFDDNRGLRIDLLLASQPLAQR 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
                ID + RG  KPSDH PV  + 
Sbjct: 241 CVETGIDYEIRGMEKPSDHAPVWATF 266


>gi|166363474|ref|YP_001655747.1| exodeoxyribonuclease III [Microcystis aeruginosa NIES-843]
 gi|166085847|dbj|BAG00555.1| exodeoxyribonuclease III [Microcystis aeruginosa NIES-843]
          Length = 266

 Score =  203 bits (516), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 94/262 (35%), Positives = 149/262 (56%), Gaps = 4/262 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSIR+R   +  W++ N  +++CLQETK  D++FP E  +SL YH+   GQK
Sbjct: 1   MKIATWNVNSIRSRQEQVINWLQLNPVEVLCLQETKVIDRDFPREAFESLGYHLYISGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHL---PGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           SYNGVAI S+    +I        G++L  +    +   T     +RI NLY+P+G+ + 
Sbjct: 61  SYNGVAIFSRKPLDDITVGFSPIIGENLTGELDEQKRVITGVIGDIRIINLYVPNGSSLD 120

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPL-IFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
           S KY  K+ W++   ++  + +  +       GD+NI  +  D Y+P   EN    + + 
Sbjct: 121 SDKYIYKLKWLETLRKYLDKIINSQPEELCICGDFNIALEDKDIYDPKGKENHIMSSAKE 180

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R++ +K+  +G  DA R        YS+WDY +  +++N+G RIDH+ L+P+      + 
Sbjct: 181 REALEKVLEIGLQDAFRKFTSAAGHYSWWDYRSGGFARNRGWRIDHLYLTPQLYEKAVNC 240

Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261
            ID +PR   KPSDHTPVI+ +
Sbjct: 241 LIDREPRKQEKPSDHTPVILEI 262


>gi|67924378|ref|ZP_00517808.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth
           [Crocosphaera watsonii WH 8501]
 gi|67853771|gb|EAM49100.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth
           [Crocosphaera watsonii WH 8501]
          Length = 262

 Score =  203 bits (516), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 90/262 (34%), Positives = 140/262 (53%), Gaps = 4/262 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSIR R  ++  W+  N+ D++CLQETK  DK+FP +  + L YH    GQK
Sbjct: 1   MKIATWNVNSIRTRQPHVIDWLTNNSIDVLCLQETKVIDKDFPRQPFEELGYHTYIYGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT---QTLRIGNLYLPHGNPIT 120
           +YNGVAI S+    +I+T       + +A+  +    I +     +RI N+Y+P+G  + 
Sbjct: 61  AYNGVAIFSRQPMTDIITGFTDIVGEEKAQSFDEQKRIISGVIDDIRIINVYVPNGASLG 120

Query: 121 STKYDDKISWIKRFLRFASQ-RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
           S KY+ K+ W +    +     L+    +   GD+NI     D YN    E     +   
Sbjct: 121 SEKYEYKLQWFQVLKAYLDDLILKEAREVCICGDFNIALDDKDIYNSKGKEKHIMSSPVE 180

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R++ Q +  +G  DA R        +S+WDY +  + +N+G RIDH+ L+ +      + 
Sbjct: 181 RETLQNILTIGLKDAFRKFTTEGGHFSWWDYRSGGFQRNRGWRIDHLYLTHKLYEKAINC 240

Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261
            ID +PR   KPSDHTPVI+ +
Sbjct: 241 TIDIEPRKQEKPSDHTPVILEI 262


>gi|258621396|ref|ZP_05716430.1| exodeoxyribonuclease III [Vibrio mimicus VM573]
 gi|262171177|ref|ZP_06038855.1| exodeoxyribonuclease III [Vibrio mimicus MB-451]
 gi|258586784|gb|EEW11499.1| exodeoxyribonuclease III [Vibrio mimicus VM573]
 gi|261892253|gb|EEY38239.1| exodeoxyribonuclease III [Vibrio mimicus MB-451]
          Length = 268

 Score =  203 bits (516), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 79/268 (29%), Positives = 128/268 (47%), Gaps = 9/268 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V ++N+N +RAR+H L A I ++ PD+I LQE K  D+ FP + ++++ Y +   GQK
Sbjct: 1   MKVISFNINGLRARLHQLQALIDKHQPDVIGLQEIKVHDEAFPRQEVEAMGYQVYFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGD-DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121
           ++ GVAIL K  P+E++   P D +   +   +      +     I N Y P G+ +   
Sbjct: 61  AHYGVAILCKQTPVEVIKGFPTDSEEHQKRMIMATFADEDGNKTTILNGYFPQGDNVEHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175
           TK+  K  + +  + +  +     E L+  GD NI P               +      F
Sbjct: 121 TKFPYKRQFYRDLMTYLREHRSNTERLVVMGDINISPLDLDIGIGEANRKRWLQTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R+  Q L + G  D  R  H      +S++DY +  +  N+G+RID I+ +P    
Sbjct: 181 QPEEREWLQTLMDWGLVDTFRQLHPEVSDQFSWFDYRSRGFDDNRGLRIDVILATPTLAE 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
               A ID + RG  KPSDH P+  +  
Sbjct: 241 TCQEAGIDYELRGIDKPSDHAPIWATFK 268


>gi|218709053|ref|YP_002416674.1| exonuclease III [Vibrio splendidus LGP32]
 gi|218322072|emb|CAV18146.1| Exodeoxyribonuclease III [Vibrio splendidus LGP32]
          Length = 268

 Score =  203 bits (516), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 78/268 (29%), Positives = 132/268 (49%), Gaps = 9/268 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V ++N+N +RAR+H L A I ++ PD+I LQE K  D+ FP   ++++ Y +   GQK
Sbjct: 1   MKVISFNINGLRARLHQLQAIIDKHQPDVIGLQEIKVHDEAFPLADVEAMGYKVYFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121
           ++ GVA+L K +PI +    P  ++   +   +      + + + + N Y P G+ I   
Sbjct: 61  AHYGVAMLCKQEPISVQKGFPTDNEDHQKRMIMATFEDEHGEKVTVLNGYFPQGDNIKHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175
           TKY  K  + K  + + +     +E +I  GD NI P               +      F
Sbjct: 121 TKYPYKRQFYKDLMTYLNDYHNKDEQVIVMGDINISPTDIDIGIGEPNAKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R+  + L + GF D+ R  H   +  YS++DY +  +  N+G+RID ++ + +   
Sbjct: 181 QPEEREWLKTLMDWGFVDSFRLLHPEVNDQYSWFDYRSKGFVDNRGLRIDVVLATQKLAD 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
               A ID + RG  KPSDH P+  +  
Sbjct: 241 KCTEAGIDYELRGIEKPSDHAPIWSTFK 268


>gi|168463303|ref|ZP_02697234.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|168821944|ref|ZP_02833944.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|195634571|gb|EDX52923.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|205341658|gb|EDZ28422.1| exodeoxyribonuclease III [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
          Length = 268

 Score =  203 bits (516), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 77/268 (28%), Positives = 122/268 (45%), Gaps = 8/268 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A ++++ PD+I LQETK  D+ FP E +  L Y++   GQK
Sbjct: 1   MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDEMFPLEEVAKLGYNVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122
            + GVA+L+K  PI +    P D  + Q R I A        + + N Y P G       
Sbjct: 61  GHYGVALLTKATPISVRRGFPDDGEEAQRRIIMAEIPSPLGNITVINGYFPQGESRDHPL 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  + +    +    L+ + P++  GD NI P         +     +      F 
Sbjct: 121 KFPAKAQFYQNLQNYLETELKCDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+   +L   G  D  R  +      +S++DY +  +  N+G+RID ++ S      
Sbjct: 181 PEEREWMSRLLKWGLVDTFREANPQTMDKFSWFDYRSKGFVDNRGLRIDLLLASAPLAER 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                ID   R   KPSDH PV  +  +
Sbjct: 241 CAETGIDYDIRSMEKPSDHAPVWATFRV 268


>gi|295676960|ref|YP_003605484.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1002]
 gi|295436803|gb|ADG15973.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1002]
          Length = 283

 Score =  203 bits (516), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 84/258 (32%), Positives = 132/258 (51%), Gaps = 1/258 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           V +ATWNVNS++ R  ++  W+  +  D++CLQE K  D+ FP   L+++ Y     GQK
Sbjct: 26  VKIATWNVNSLKVRQQHVIDWLASSGTDVLCLQELKLPDEKFPRAELEAVGYRSWYAGQK 85

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGV IL +   + +       ++       +         +RI + Y P+G    + K
Sbjct: 86  TYNGVGILVREG-VNVDESSIVRNIPGFEDPQQRVIAATVDGVRIISAYFPNGQAPGTDK 144

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W+     + +  + L   L   GDYNI P+  D ++P  WE     + E R +F
Sbjct: 145 FAYKLRWLDALHDWLATEMTLHPKLALLGDYNIAPEDRDVHDPKAWEGQNLVSPEERAAF 204

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            +L  +G  DA R       +YS+WDY   ++ +N G+RIDHI+LS   + +  +  ID 
Sbjct: 205 VRLIGLGLLDAFRQFEQQEKIYSWWDYRMMAFRRNAGLRIDHILLSKALSDICKACDIDK 264

Query: 244 KPRGWTKPSDHTPVIVSL 261
            PR W +PSDH PV   L
Sbjct: 265 VPRKWDQPSDHAPVFAQL 282


>gi|240949558|ref|ZP_04753897.1| exonuclease III [Actinobacillus minor NM305]
 gi|257465617|ref|ZP_05629988.1| exonuclease III [Actinobacillus minor 202]
 gi|240295999|gb|EER46665.1| exonuclease III [Actinobacillus minor NM305]
 gi|257451277|gb|EEV25320.1| exonuclease III [Actinobacillus minor 202]
          Length = 267

 Score =  203 bits (516), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 83/267 (31%), Positives = 127/267 (47%), Gaps = 8/267 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A I+++ PD+I LQE K  D++FP++ +  L YH+   GQK
Sbjct: 1   MKFISFNINGLRARPHQLEAIIEKHQPDVIGLQEIKVADEDFPYDLVNHLGYHVFHHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122
            + GVA+L+K  P+ +    P D  D Q R I A       TL + N Y P G   +  T
Sbjct: 61  GHYGVALLTKKAPLAVRKGFPTDAEDAQKRMIMADIETEFGTLTVLNGYFPQGENRSHET 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  +      +   +L+ E P+I  GD NI P               + +    F 
Sbjct: 121 KFPAKAKFYADLQHYLENQLKPENPIIIMGDMNISPTDLDIGIGEANRKRWLRDGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+   +L   G  D  RA +      +S++DY +  +  N+G+RID ++ S      
Sbjct: 181 PEEREWLDRLYGYGLVDTFRAMNPLAADKFSWFDYRSKGFDDNRGLRIDLVLASKSLAER 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262
                ID + R   KPSDH+PV     
Sbjct: 241 CVETGIDLEIRAMEKPSDHSPVWAVFK 267


>gi|194099379|ref|YP_002002479.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae NCCP11945]
 gi|240014802|ref|ZP_04721715.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae DGI18]
 gi|240116328|ref|ZP_04730390.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae PID18]
 gi|240121325|ref|ZP_04734287.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae PID24-1]
 gi|268601995|ref|ZP_06136162.1| exodeoxyribonuclease III [Neisseria gonorrhoeae PID18]
 gi|193934669|gb|ACF30493.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae NCCP11945]
 gi|268586126|gb|EEZ50802.1| exodeoxyribonuclease III [Neisseria gonorrhoeae PID18]
          Length = 256

 Score =  203 bits (516), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 91/260 (35%), Positives = 136/260 (52%), Gaps = 4/260 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + TWNVNS+  R+  +   + +N PDI+ LQE K +   FP   LQ + +H    GQK
Sbjct: 1   MKITTWNVNSLNVRLPQVQNLLADNPPDILVLQELKLDQDKFPAAALQMMGWHCVWSGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAI+S+  P ++   LP    D Q R I AT       +R+ N+Y  +G  + S K
Sbjct: 61  TYNGVAIVSRSVPQDVHFGLPSLPDDPQRRVIAATVGG----VRVINVYCVNGEALDSPK 116

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K  W      F    +     L+  GD+NI P   DCY+P  W      +   RQ F
Sbjct: 117 FKYKEQWFAALTEFVRDEMTRHGKLVLLGDFNIAPADADCYDPEKWYEKIHCSSVERQWF 176

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q L ++G TD++R  H     Y+++DY    + +  G+RIDHI+++ E  ++L   RID 
Sbjct: 177 QNLLDLGLTDSLRQVHPEGAFYTWFDYRGAMFQRKLGLRIDHILVTSEMAAVLKDVRIDL 236

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
           + R   +PSDH PV    D+
Sbjct: 237 ETRALERPSDHAPVAAEFDL 256


>gi|84393754|ref|ZP_00992502.1| exodeoxyribonuclease III [Vibrio splendidus 12B01]
 gi|84375616|gb|EAP92515.1| exodeoxyribonuclease III [Vibrio splendidus 12B01]
          Length = 268

 Score =  203 bits (516), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 78/268 (29%), Positives = 132/268 (49%), Gaps = 9/268 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V ++N+N +RAR+H L A I ++ PD+I LQE K  D+ FP   ++++ Y +   GQK
Sbjct: 1   MKVISFNINGLRARLHQLQAIIDKHQPDVIGLQEIKVHDEAFPLADVEAMGYKVYFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121
           ++ GVA+L K +P+ +    P  ++   +   +      N + + + N Y P G+ I   
Sbjct: 61  AHYGVAMLCKQEPVSVQKGFPTDNEDHQKRMIMATFEDENGEKVTVLNGYFPQGDNIKHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175
           TKY  K  + K  + + +     +E +I  GD NI P               +      F
Sbjct: 121 TKYPYKREFYKDLMTYLNDYHNKDEQVIVMGDINISPTDIDIGIGEPNAKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R+  + L + GF D+ R  H   +  YS++DY +  +  N+G+RID ++ + +   
Sbjct: 181 QPEEREWLKTLMDWGFVDSFRLLHPEVNDQYSWFDYRSKGFVDNRGLRIDVVLATQKLAD 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
               A ID + RG  KPSDH P+  +  
Sbjct: 241 KCTEAGIDYELRGIEKPSDHAPIWSTFK 268


>gi|218695307|ref|YP_002402974.1| exonuclease III [Escherichia coli 55989]
 gi|331668438|ref|ZP_08369286.1| exodeoxyribonuclease III [Escherichia coli TA271]
 gi|218352039|emb|CAU97776.1| exonuclease III [Escherichia coli 55989]
 gi|323948123|gb|EGB44113.1| exodeoxyribonuclease III [Escherichia coli H120]
 gi|324119235|gb|EGC13123.1| exodeoxyribonuclease III [Escherichia coli E1167]
 gi|331063632|gb|EGI35543.1| exodeoxyribonuclease III [Escherichia coli TA271]
          Length = 268

 Score =  203 bits (516), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 78/266 (29%), Positives = 123/266 (46%), Gaps = 8/266 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A ++++ PD+I LQETK  D  FP E +  L Y++   GQK
Sbjct: 1   MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            + GVA+L+K  PI +    PGDD + Q R I A        + + N Y P G       
Sbjct: 61  GHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSPLGNVTVINGYFPQGESRDHPI 120

Query: 124 -YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
            +  K  + +    +    L+ + P++  GD NI P         +     +      F 
Sbjct: 121 KFPAKAQFYQNLQNYLETELKRDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+   +L + G  D  R  +      +S++DY +  +  N+G+RID ++ S      
Sbjct: 181 PEEREWMDRLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAEC 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
                ID + R   KPSDH PV  + 
Sbjct: 241 CVETGIDYEIRSMEKPSDHAPVWATF 266


>gi|332161914|ref|YP_004298491.1| exonuclease III [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
 gi|318605567|emb|CBY27065.1| exodeoxyribonuclease III [Yersinia enterocolitica subsp.
           palearctica Y11]
 gi|325666144|gb|ADZ42788.1| exonuclease III [Yersinia enterocolitica subsp. palearctica
           105.5R(r)]
 gi|330859743|emb|CBX70078.1| exodeoxyribonuclease III [Yersinia enterocolitica W22703]
          Length = 268

 Score =  203 bits (516), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 83/268 (30%), Positives = 128/268 (47%), Gaps = 8/268 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H LAA I+++ PD+I LQETK  D  FP E +    YH+   GQK
Sbjct: 1   MKFVSFNINGLRARPHQLAAIIEQHQPDVIGLQETKVHDDMFPLEEVSQHGYHVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            + GVA+L+K +P+ +    P D+ D Q R I A        L + N Y P G       
Sbjct: 61  GHYGVALLTKNEPLAVRRGFPTDEEDAQRRIIMADIATPQGPLTVINGYFPQGESRDHPI 120

Query: 124 -YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
            +  K  +     ++  Q+L  +  ++  GD NI P         D     +      F 
Sbjct: 121 KFPAKERFYADLQQYLEQQLSADAQVLIMGDLNISPTDLDIGIGEDSRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R   ++LQN G  D  RA +   +  +S++DY +  + +N+G+RID ++ S    + 
Sbjct: 181 PEERAWLERLQNWGLVDTFRAANPDCNDQFSWFDYRSRGFDENRGLRIDLLLASRPLAAR 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             +  ID   R   KPSDH PV     +
Sbjct: 241 CIATGIDYDIRSMEKPSDHAPVWSEFAV 268


>gi|323978068|gb|EGB73154.1| exodeoxyribonuclease III [Escherichia coli TW10509]
          Length = 268

 Score =  203 bits (516), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 77/266 (28%), Positives = 122/266 (45%), Gaps = 8/266 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A ++++ PD+I LQETK  D  FP E +  L Y++   GQK
Sbjct: 1   MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            + GVA+L+K  PI +    P D  + Q R I A        + + N Y P G       
Sbjct: 61  GHYGVALLTKETPIAVRRGFPDDGEEAQRRIIMAEIPSPLGNVTVINGYFPQGESRDHPI 120

Query: 124 -YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
            +  K  + +    +    L+ E P++  GD NI P         +     +      F 
Sbjct: 121 KFPAKAQFYQNLQNYLETELKRENPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+  ++L + G  D  R  +      +S++DY +  +  N+G+RID ++ S      
Sbjct: 181 PEEREWMERLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLADC 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
                ID + R   KPSDH PV  + 
Sbjct: 241 CVETGIDYEIRSMEKPSDHAPVWATF 266


>gi|56479910|ref|NP_707364.2| exonuclease III [Shigella flexneri 2a str. 301]
 gi|56383461|gb|AAN43071.2| exonuclease III [Shigella flexneri 2a str. 301]
          Length = 268

 Score =  203 bits (516), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 78/266 (29%), Positives = 123/266 (46%), Gaps = 8/266 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A ++++ PD+I LQETK  D  FP E +  L Y++   GQK
Sbjct: 1   MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            + GVA+L+K  PI +    PGDD + Q R I A        + + N Y P G       
Sbjct: 61  GHYGVALLTKETPIAVRRGFPGDDEETQRRIIMAEIPSLLGNVTVINGYFPQGESRDHPI 120

Query: 124 -YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
            +  K  + +    +    L+ + P++  GD NI P         +     +      F 
Sbjct: 121 KFPAKAQFYQNLQNYLETELKRDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+   +L + G  D  R  +      +S++DY +  +  N+G+RID ++ S      
Sbjct: 181 PEEREWMDRLMSWGVVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAEC 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
                ID + R   KPSDH PV  + 
Sbjct: 241 CVETGIDYEIRSMEKPSDHAPVWATF 266


>gi|56552297|ref|YP_163136.1| exodeoxyribonuclease III Xth [Zymomonas mobilis subsp. mobilis ZM4]
 gi|56543871|gb|AAV90025.1| exodeoxyribonuclease III Xth [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 261

 Score =  203 bits (516), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 113/260 (43%), Positives = 160/260 (61%), Gaps = 6/260 (2%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64
            +A++NVN I AR+  L  W+++  PDI+CLQE K++D  FP E ++   Y+    GQK+
Sbjct: 3   KIASFNVNGINARLPRLIEWLEKFQPDILCLQELKSDDARFPQEEIEKTGYYCLYHGQKA 62

Query: 65  YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124
           YNGVAILSK QP  I T LP D    Q+R+IEA        L + +LYLP+GNP+ S KY
Sbjct: 63  YNGVAILSKEQPKLIRTSLPDDPDPTQSRYIEAEID----NLTVASLYLPNGNPLNSPKY 118

Query: 125 DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH--DCYNPIIWENDACFTLEVRQS 182
           D K++W K FL  A    + E+P+I AGDYN++P     D  N     ++A    E    
Sbjct: 119 DYKLAWFKAFLAHARSLWQQEKPVILAGDYNVVPSFDIKDIRNAAALADNALLAPESLFY 178

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           +++L  MG+TD++R  H +  LYSFWDY A SW ++ G+RIDHI+L+P+    L  + +D
Sbjct: 179 WRQLLAMGWTDSLRVRHPSEPLYSFWDYQAQSWPRDDGMRIDHILLTPDLADGLTDSGVD 238

Query: 243 TKPRGWTKPSDHTPVIVSLD 262
            + RG  K SDH PV + +D
Sbjct: 239 RQMRGQEKASDHAPVWIEID 258


>gi|240113324|ref|ZP_04727814.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae MS11]
 gi|260439854|ref|ZP_05793670.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae DGI2]
 gi|268599400|ref|ZP_06133567.1| exodeoxyribonuclease III [Neisseria gonorrhoeae MS11]
 gi|291043128|ref|ZP_06568851.1| exodeoxyribonuclease III [Neisseria gonorrhoeae DGI2]
 gi|268583531|gb|EEZ48207.1| exodeoxyribonuclease III [Neisseria gonorrhoeae MS11]
 gi|291012734|gb|EFE04717.1| exodeoxyribonuclease III [Neisseria gonorrhoeae DGI2]
          Length = 256

 Score =  203 bits (516), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 91/260 (35%), Positives = 136/260 (52%), Gaps = 4/260 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + TWNVNS+  R+  +   + +N PDI+ LQE K +   FP   LQ + +H    GQK
Sbjct: 1   MKITTWNVNSLNVRLPQVQNLLADNPPDILVLQELKLDQDKFPAAALQMMGWHCVWSGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAI+S+  P ++   LP    D Q R I AT       +R+ N+Y  +G  + S K
Sbjct: 61  TYNGVAIVSRSVPQDVHFGLPSLPDDPQRRVIAATVGG----VRVINVYCVNGEALDSPK 116

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K  W      F    +     L+  GD+NI P   DCY+P  W      +   RQ F
Sbjct: 117 FKYKEQWFAALTEFVRDEMSRHGKLVLLGDFNIAPADADCYDPEKWYEKIHCSSVERQWF 176

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q L ++G TD++R  H     Y+++DY    + +  G+RIDHI+++ E  ++L   RID 
Sbjct: 177 QNLLDLGLTDSLRQVHPEGAFYTWFDYRGAMFQRKLGLRIDHILVTSEMAAVLKDVRIDL 236

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
           + R   +PSDH PV    D+
Sbjct: 237 ETRALERPSDHAPVAAEFDL 256


>gi|124267258|ref|YP_001021262.1| exodeoxyribonuclease III [Methylibium petroleiphilum PM1]
 gi|124260033|gb|ABM95027.1| Exodeoxyribonuclease III [Methylibium petroleiphilum PM1]
          Length = 256

 Score =  203 bits (516), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 82/258 (31%), Positives = 135/258 (52%), Gaps = 5/258 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+  R+  +  W+  N  D + LQETK  D  FP   +++  Y ++  GQK
Sbjct: 1   MRLATWNVNSLAVRLPQVLDWLTANPVDALVLQETKLTDDKFPRAEIEAAGYAVQWFGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVA+LS+    ++  ++ G   +                +R+   Y P+G    S K
Sbjct: 61  TYNGVALLSREPAHDVTKNIFGFADEQARVIAGTVDG-----VRVIGAYFPNGQAPDSEK 115

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K++W++    +    L     L+  GD+NI P+  D ++P++W      T + R+ F
Sbjct: 116 FTYKMAWLQALRDWVRSELAAHPRLVLMGDFNIAPEDRDVHDPVLWAGQIHCTPQEREHF 175

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           ++L  +G  DA R        +S+WDY   ++ KN+G+RIDHI++S      + +  ID 
Sbjct: 176 RELIALGLVDAFRLFEQPPKSWSWWDYRNLAFRKNQGLRIDHILVSEALRPAVSACMIDK 235

Query: 244 KPRGWTKPSDHTPVIVSL 261
            PR   +PSDH PV+V L
Sbjct: 236 LPRKNERPSDHAPVVVEL 253


>gi|296393768|ref|YP_003658652.1| exodeoxyribonuclease III Xth [Segniliparus rotundus DSM 44985]
 gi|296180915|gb|ADG97821.1| exodeoxyribonuclease III Xth [Segniliparus rotundus DSM 44985]
          Length = 267

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 79/266 (29%), Positives = 126/266 (47%), Gaps = 7/266 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+NSIRAR     AW++ +  D++ LQETK  +  FP    +   Y +   G  
Sbjct: 1   MRIATWNINSIRARADRAVAWLERSQVDVLALQETKCANAQFPEAPFREAGYAVAHTGNG 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-----TQTLRIGNLYLPHGNP 118
            +NGVAI+S+    ++     G     +     A             +RI +LY+P+G  
Sbjct: 61  QWNGVAIVSRLGLGDVRIGFDGQPGFHKDPEAPAEPEPRAIAATCGGVRIWSLYVPNGRD 120

Query: 119 ITSTKYDDKISWIKRFLRFASQRL--ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
           +    Y  K+ W+      A   L  + E  +  AGD+NI P   D ++P ++E     +
Sbjct: 121 LADRHYRYKLDWLAALKDQAEGWLAADPEAKIALAGDWNIAPFDEDVWDPSLFEGKTHTS 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
              R +F   +  GFTD  R       LY++WDY    + + +G+RID ++ SP     +
Sbjct: 181 APERAAFFAFEQAGFTDVARPHTPGPGLYTYWDYTQLRFPRREGMRIDFVLGSPALARAV 240

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLD 262
             A +D + R     SDH PV+V L+
Sbjct: 241 QGASVDREERKGKGASDHAPVVVDLE 266


>gi|330431149|gb|AEC16208.1| exonuclease III [Gallibacterium anatis UMN179]
          Length = 267

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 82/267 (30%), Positives = 121/267 (45%), Gaps = 8/267 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L   I +  PD++ LQE K  D+ FP E +  L YH+   GQK
Sbjct: 1   MKFISFNINGLRARPHQLHQLIAQYQPDVLGLQEIKVADEAFPHEIVADLGYHVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122
           S+ GVA+L+K QP+ +    P D  D Q R I A        L + N Y P G   +  T
Sbjct: 61  SHYGVALLTKQQPLAVRKGFPTDAEDAQRRIIMADLATPFGQLTVINGYFPQGENRSHET 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  + +    +  +      P++  GD NI P         +     +      F 
Sbjct: 121 KFPAKEKFYRDLQHYLVKEHNAANPVLVMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+  Q L   G  D  RA H   +  +S++DY +  +  N+G+RID I+ +      
Sbjct: 181 PEEREWLQNLYQYGLVDTFRALHPQVNDQFSWFDYRSKGFDDNRGLRIDLILANQALAQR 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262
             SA I    R   KPSDH P+     
Sbjct: 241 CISAGIAKDIRAMEKPSDHAPIWAEFK 267


>gi|308375155|ref|ZP_07442904.2| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           SUMu007]
 gi|308376392|ref|ZP_07438692.2| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           SUMu008]
 gi|308347245|gb|EFP36096.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           SUMu007]
 gi|308351175|gb|EFP40026.1| exodeoxyribonuclease III protein xthA [Mycobacterium tuberculosis
           SUMu008]
          Length = 273

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 78/266 (29%), Positives = 126/266 (47%), Gaps = 7/266 (2%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           ++ +ATWNVNSIR R+  +  W+   + D++ +QETK  D  FP   L  L Y +   G 
Sbjct: 5   LLRLATWNVNSIRTRLDRVLDWLGRADVDVLAMQETKCPDGQFPALPLFELGYDVAHVGF 64

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-----TQTLRIGNLYLPHGN 117
             +NGVAI S+    ++     G         + AT            +R+ +LY+P+G 
Sbjct: 65  DQWNGVAIASRVGLDDVRVGFDGQPSWSGKPEVAATTEARALGATCGGIRVWSLYVPNGR 124

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEE--PLIFAGDYNIIPQPHDCYNPIIWENDACF 175
            +    Y  K+ W+      A   L  +   P+   GD+NI P   D ++   +      
Sbjct: 125 ALDDPHYTYKLDWLAALRDTAEGWLRDDPAAPIALMGDWNIAPTDDDVWSTEFFAGCTHV 184

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
           +   R++F  + +  FTD +R       +Y++WDY    + K +G+RID I+ SP   + 
Sbjct: 185 SEPERKAFNAIVDAQFTDVVRPFTPGPGVYTYWDYTQLRFPKKQGMRIDFILGSPALAAR 244

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
           +  A+I  + R    PSDH PV+V L
Sbjct: 245 VMDAQIVREERKGKAPSDHAPVLVDL 270


>gi|302186191|ref|ZP_07262864.1| exonuclease III [Pseudomonas syringae pv. syringae 642]
          Length = 270

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 89/269 (33%), Positives = 134/269 (49%), Gaps = 11/269 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +RAR H LAA I ++ PD+I LQETK  D+ FP   +++L YH+   GQK
Sbjct: 1   MKIVSFNINGLRARPHQLAALIDKHQPDVIGLQETKVSDEQFPQAEVEALGYHVHFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122
            + GVA+LS+  P+ +     GDD D Q RFI  T+   N Q + I N Y P G      
Sbjct: 61  GHYGVALLSRNAPLALHKGFEGDDEDSQKRFIWGTYADSNGQPVTIMNGYFPQGESRDHP 120

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175
            K+  K  + +        +   ++PLI  GD NI PQ        D     +      F
Sbjct: 121 TKFPAKQRFYENLQTLLESQFRNDQPLIVMGDVNISPQDCDIGIGADNAKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232
             E R+  ++L++ G  D  R  +      +S++DY +  +     +G+RID IM S   
Sbjct: 181 LPEEREWMERLKSWGLVDTFRHLYPEVVDRFSWFDYRSRGFEDEPKRGLRIDLIMTSTGL 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
              +  A +D   RG  KPSDH P+ + L
Sbjct: 241 QPRIKEAGVDYDLRGMEKPSDHAPIWLEL 269


>gi|269796800|ref|YP_003316255.1| exodeoxyribonuclease III [Sanguibacter keddieii DSM 10542]
 gi|269098985|gb|ACZ23421.1| Exodeoxyribonuclease III [Sanguibacter keddieii DSM 10542]
          Length = 263

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 80/261 (30%), Positives = 130/261 (49%), Gaps = 3/261 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+NSIRAR+    A+++ +  D++ LQETK +D  FPFE  ++  Y +   G  
Sbjct: 1   MRLATWNINSIRARVDRAVAFLERSGTDVLALQETKAKDSQFPFEAFEAAGYEVAHFGLS 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT-LRIGNLYLPHGNPITST 122
            +NGVAI+S+    ++    P      +   +EA     T   +R+ +LY+PHG  + + 
Sbjct: 61  QWNGVAIISRVGLEDVSLGFPDQPQFGEEPVVEARAIGATCGGVRVWSLYVPHGRALDNP 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIF--AGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
            Y  K+ W+      A   +E +        GD+N+ P+  D ++  ++E     +   R
Sbjct: 121 HYAYKLDWLSTLRGHAQSWVEADPQAKVALVGDWNVAPRDTDVWDMAVFEGQTHVSQPER 180

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            +F   +  G+T+  R        Y++WDY    + KN+G+RID    SP  TS +    
Sbjct: 181 DAFAAFEGAGYTEVSREFVPEDRKYTYWDYQQLRFPKNQGLRIDFAYTSPALTSAVTGVE 240

Query: 241 IDTKPRGWTKPSDHTPVIVSL 261
           ID   R     SDH PVIV +
Sbjct: 241 IDRDERKGKGASDHVPVIVDI 261


>gi|198282497|ref|YP_002218818.1| exodeoxyribonuclease III Xth [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218667378|ref|YP_002424687.1| exodeoxyribonuclease III [Acidithiobacillus ferrooxidans ATCC
           23270]
 gi|198247018|gb|ACH82611.1| exodeoxyribonuclease III Xth [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218519591|gb|ACK80177.1| exodeoxyribonuclease III [Acidithiobacillus ferrooxidans ATCC
           23270]
          Length = 257

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 85/259 (32%), Positives = 128/259 (49%), Gaps = 5/259 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS++ R+  +  W+    PD++CLQETK  D  FP   L    Y     GQ 
Sbjct: 1   MKIATWNVNSLKVRLPQVLEWLGSEQPDVLCLQETKLADARFPVAELADAGYRALYHGQP 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAILS+  P ++    P            +        LR+ N+Y+P+G  + S K
Sbjct: 61  TYNGVAILSRTSPSDVRCDWPDGGDGQARLCAASFGD-----LRVVNVYVPNGQALDSDK 115

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W++R     +  L+    L+  GD+NI P   D Y+   W      +   R + 
Sbjct: 116 YPYKLQWLERLRGLIAGELQGWPQLLLVGDFNIAPDTRDVYDAAEWGEGILCSAPERAAL 175

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             L  +G  D+ R  H     +S+WDY A ++ +N+G+RID I+ S    S      ID 
Sbjct: 176 GALLELGLHDSYRKMHPDARAWSWWDYRAAAFRRNQGLRIDLILASSPVLSRTREVVIDR 235

Query: 244 KPRGWTKPSDHTPVIVSLD 262
             R   +PSDH PV ++L+
Sbjct: 236 AARAAERPSDHAPVCITLE 254


>gi|209520714|ref|ZP_03269463.1| exodeoxyribonuclease III Xth [Burkholderia sp. H160]
 gi|209498839|gb|EDZ98945.1| exodeoxyribonuclease III Xth [Burkholderia sp. H160]
          Length = 258

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 83/258 (32%), Positives = 133/258 (51%), Gaps = 1/258 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS++ R  ++  W+  +  D++CLQE K  D+ FP   L+++ Y     GQK
Sbjct: 1   MKIATWNVNSLKVRQQHVIDWLASSGTDVLCLQELKLPDEKFPRAELEAIGYRSWYAGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGV IL + + + +       ++       +       + +RI + Y P+G    + K
Sbjct: 61  TYNGVGILVR-EGLNVDESSIVRNIPGFEDQQQRVIAATVEGVRIISAYFPNGQAPGTDK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W+     + S    L   L   GDYNI P+  D ++P  WE     + E R +F
Sbjct: 120 FAYKLRWLDALHDWLSTETTLHPKLALLGDYNIAPEDRDVHDPKAWEGQNLVSPEERAAF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            +L  +G  DA R       +YS+WDY   ++ +N G+RIDHI+LS   + +  +  +D 
Sbjct: 180 VRLIALGLLDAFRQFEQPEKIYSWWDYRMMAFRRNAGLRIDHILLSKALSDICTACDVDK 239

Query: 244 KPRGWTKPSDHTPVIVSL 261
            PR W +PSDH PV   L
Sbjct: 240 VPRKWDQPSDHAPVFAQL 257


>gi|85059341|ref|YP_455043.1| exonuclease III [Sodalis glossinidius str. 'morsitans']
 gi|84779861|dbj|BAE74638.1| exodeoxyribonuclease III [Sodalis glossinidius str. 'morsitans']
          Length = 268

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 83/268 (30%), Positives = 123/268 (45%), Gaps = 8/268 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A I    PD+I LQETK  D  FP E +    YH+   GQK
Sbjct: 1   MKFVSFNINGLRARPHQLEAIITTLQPDVIGLQETKVHDDMFPLEEVSRHGYHVYYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122
            + GVA+LS+ +P+ I      D  + Q R I A F      L + N Y P G       
Sbjct: 61  GHYGVALLSREKPLAIRRGFSTDGAEAQRRIIMADFLTPKGALTVVNGYFPQGENRDHPL 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  + +    +  Q    E  L+  GD NI P         +     +      F 
Sbjct: 121 KFPAKERFYRDLQGYVEQSHHGESLLLIMGDMNISPTDLDIGIGEESRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHH-LYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R   ++L + G  D  R  + T    YS++DY +  + +N+G+RID ++ S    ++
Sbjct: 181 PEERAWMERLLSWGLVDTYRQANPTDDSRYSWFDYRSRGFDENRGLRIDLLLASKPLAAV 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           + +A ID   R   KPSDH PV     +
Sbjct: 241 VRAAGIDYTIRAMDKPSDHAPVWADFAL 268


>gi|239994244|ref|ZP_04714768.1| exodeoxyribonuclease III [Alteromonas macleodii ATCC 27126]
          Length = 269

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 84/268 (31%), Positives = 132/268 (49%), Gaps = 9/268 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V ++N+N IRAR+H L A I  + PDII LQE K  ++ FP E ++++ YH+   GQK
Sbjct: 1   MKVISFNINGIRARLHQLQAVIDAHQPDIIGLQEIKVHNEQFPVEAVEAMGYHVYFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLD-VQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121
           S+ GVA L+K +P+ +    P DD D  +   I  T     + + + N Y P G      
Sbjct: 61  SHYGVAFLAKKEPLSVSMGFPTDDEDAQRRMIILKTTDDAGEPVTVLNGYFPQGENEKHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175
           TKY  K  + K  + +       ++ +I  GD NI           D     +      F
Sbjct: 121 TKYPAKRKFYKDLMTYLDDNHTPDDNVIVMGDVNISHTDLDIGIGEDNRKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R+    + + GF D+ R  +   +  +S++DY +  ++ N+G+RID I+ +    +
Sbjct: 181 LPEEREWLNTVIDWGFEDSFRTLNPETNDKFSWFDYRSKGFNDNRGLRIDLILATKPLHA 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
            LH A ID + RG  KPSDH P+     
Sbjct: 241 KLHDAGIDYELRGIEKPSDHAPIWAEYK 268


>gi|24374562|ref|NP_718605.1| exonuclease III [Shewanella oneidensis MR-1]
 gi|24349161|gb|AAN56049.1|AE015740_3 exodeoxyribonuclease III [Shewanella oneidensis MR-1]
          Length = 270

 Score =  203 bits (516), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 85/268 (31%), Positives = 132/268 (49%), Gaps = 9/268 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +R+R+H L A I  + PDII LQETK  D+ FP   ++++ YH+   G K
Sbjct: 1   MKIVSFNINGLRSRLHQLQALIDSHQPDIIGLQETKVHDEAFPLAEVEAMGYHVHYHGGK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122
           ++ GVA+LSK  P+++      D+ D Q R I  TF   N + L + N Y P G  I   
Sbjct: 61  AHYGVAMLSKVAPLKVQKGFATDEEDAQRRMIIGTFAQANGRPLTVLNGYFPQGESIDHP 120

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175
            KY  K  + +  +         +E +   GD NI P   D           +      F
Sbjct: 121 TKYPAKRKFYQDLMAHLHANHSNDEDIAIIGDINISPIDLDIGIGEVNRKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R+  + LQ+ G  D  R  H      YS++DY +  +  N+G+RID I+ +P   +
Sbjct: 181 QPEEREWLKTLQDWGLVDTFRQLHPDRSERYSWFDYRSKGFDDNRGLRIDVILATPSLAA 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
            L  + +D + RG  KPSDH P+  +  
Sbjct: 241 RLVESDVDYELRGIDKPSDHAPIWSTFK 268


>gi|218699684|ref|YP_002407313.1| exonuclease III [Escherichia coli IAI39]
 gi|218369670|emb|CAR17439.1| exonuclease III [Escherichia coli IAI39]
          Length = 268

 Score =  203 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 77/266 (28%), Positives = 122/266 (45%), Gaps = 8/266 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A ++++ PD+I LQETK  D  FP E +  L Y++   GQK
Sbjct: 1   MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            + GVA+L+K  PI +    P D  + Q R I A        + + N Y P G       
Sbjct: 61  GHYGVALLTKETPIAVRRGFPDDGEEAQRRIIIAEIPSPLGNVTVINGYFPQGESRDHPI 120

Query: 124 -YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
            +  K  + +    +    L+ E P++  GD NI P         +     +      F 
Sbjct: 121 KFPAKAQFYQNLQNYLETELKRENPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+  ++L + G  D  R  +      +S++DY +  +  N+G+RID ++ S      
Sbjct: 181 PEEREWMERLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAEC 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
                ID + R   KPSDH PV  + 
Sbjct: 241 CVETGIDYEIRSMEKPSDHAPVWATF 266


>gi|16129703|ref|NP_416263.1| exonuclease III [Escherichia coli str. K-12 substr. MG1655]
 gi|74311932|ref|YP_310351.1| exonuclease III [Shigella sonnei Ss046]
 gi|82543848|ref|YP_407795.1| exonuclease III [Shigella boydii Sb227]
 gi|89108588|ref|AP_002368.1| exonuclease III [Escherichia coli str. K-12 substr. W3110]
 gi|157157800|ref|YP_001463047.1| exonuclease III [Escherichia coli E24377A]
 gi|157161211|ref|YP_001458529.1| exonuclease III [Escherichia coli HS]
 gi|170081406|ref|YP_001730726.1| exonuclease III [Escherichia coli str. K-12 substr. DH10B]
 gi|187730490|ref|YP_001880544.1| exonuclease III [Shigella boydii CDC 3083-94]
 gi|188495310|ref|ZP_03002580.1| exodeoxyribonuclease III [Escherichia coli 53638]
 gi|191169042|ref|ZP_03030806.1| exodeoxyribonuclease III [Escherichia coli B7A]
 gi|193065803|ref|ZP_03046866.1| exodeoxyribonuclease III [Escherichia coli E22]
 gi|193068936|ref|ZP_03049895.1| exodeoxyribonuclease III [Escherichia coli E110019]
 gi|194428570|ref|ZP_03061109.1| exodeoxyribonuclease III [Escherichia coli B171]
 gi|194438505|ref|ZP_03070594.1| exodeoxyribonuclease III [Escherichia coli 101-1]
 gi|209919111|ref|YP_002293195.1| exonuclease III [Escherichia coli SE11]
 gi|218554315|ref|YP_002387228.1| exonuclease III [Escherichia coli IAI1]
 gi|238900963|ref|YP_002926759.1| exonuclease III [Escherichia coli BW2952]
 gi|254161808|ref|YP_003044916.1| exonuclease III [Escherichia coli B str. REL606]
 gi|256018057|ref|ZP_05431922.1| exonuclease III [Shigella sp. D9]
 gi|256022587|ref|ZP_05436452.1| exonuclease III [Escherichia sp. 4_1_40B]
 gi|260844099|ref|YP_003221877.1| exonuclease III [Escherichia coli O103:H2 str. 12009]
 gi|260855614|ref|YP_003229505.1| exonuclease III [Escherichia coli O26:H11 str. 11368]
 gi|260868274|ref|YP_003234676.1| exonuclease III [Escherichia coli O111:H- str. 11128]
 gi|293446121|ref|ZP_06662543.1| exodeoxyribonuclease III [Escherichia coli B088]
 gi|297518661|ref|ZP_06937047.1| exonuclease III [Escherichia coli OP50]
 gi|301020970|ref|ZP_07185022.1| exodeoxyribonuclease III [Escherichia coli MS 196-1]
 gi|307138408|ref|ZP_07497764.1| exonuclease III [Escherichia coli H736]
 gi|307310679|ref|ZP_07590325.1| exodeoxyribonuclease III [Escherichia coli W]
 gi|312969777|ref|ZP_07783960.1| exodeoxyribonuclease III [Escherichia coli 1827-70]
 gi|2506193|sp|P09030|EX3_ECOLI RecName: Full=Exodeoxyribonuclease III; Short=EXO III;
           Short=Exonuclease III; AltName: Full=AP endonuclease VI
 gi|157829928|pdb|1AKO|A Chain A, Exonuclease Iii From Escherichia Coli
 gi|43312|emb|CAA31424.1| exonuclease III [Escherichia coli K-12]
 gi|1742858|dbj|BAA15540.1| exonuclease III [Escherichia coli str. K12 substr. W3110]
 gi|1788046|gb|AAC74819.1| exonuclease III [Escherichia coli str. K-12 substr. MG1655]
 gi|73855409|gb|AAZ88116.1| exonuclease III [Shigella sonnei Ss046]
 gi|81245259|gb|ABB65967.1| exonuclease III [Shigella boydii Sb227]
 gi|157066891|gb|ABV06146.1| exodeoxyribonuclease III [Escherichia coli HS]
 gi|157079830|gb|ABV19538.1| exodeoxyribonuclease III [Escherichia coli E24377A]
 gi|169889241|gb|ACB02948.1| exonuclease III [Escherichia coli str. K-12 substr. DH10B]
 gi|187427482|gb|ACD06756.1| exodeoxyribonuclease III [Shigella boydii CDC 3083-94]
 gi|188490509|gb|EDU65612.1| exodeoxyribonuclease III [Escherichia coli 53638]
 gi|190900924|gb|EDV60709.1| exodeoxyribonuclease III [Escherichia coli B7A]
 gi|192926575|gb|EDV81206.1| exodeoxyribonuclease III [Escherichia coli E22]
 gi|192957731|gb|EDV88175.1| exodeoxyribonuclease III [Escherichia coli E110019]
 gi|194413448|gb|EDX29731.1| exodeoxyribonuclease III [Escherichia coli B171]
 gi|194422515|gb|EDX38513.1| exodeoxyribonuclease III [Escherichia coli 101-1]
 gi|209912370|dbj|BAG77444.1| exonuclease III [Escherichia coli SE11]
 gi|218361083|emb|CAQ98666.1| exonuclease III [Escherichia coli IAI1]
 gi|238861051|gb|ACR63049.1| exonuclease III [Escherichia coli BW2952]
 gi|242377470|emb|CAQ32223.1| exonuclease III [Escherichia coli BL21(DE3)]
 gi|253973709|gb|ACT39380.1| exonuclease III [Escherichia coli B str. REL606]
 gi|253977903|gb|ACT43573.1| exonuclease III [Escherichia coli BL21(DE3)]
 gi|257754263|dbj|BAI25765.1| exonuclease III [Escherichia coli O26:H11 str. 11368]
 gi|257759246|dbj|BAI30743.1| exonuclease III [Escherichia coli O103:H2 str. 12009]
 gi|257764630|dbj|BAI36125.1| exonuclease III [Escherichia coli O111:H- str. 11128]
 gi|291322951|gb|EFE62379.1| exodeoxyribonuclease III [Escherichia coli B088]
 gi|299881725|gb|EFI89936.1| exodeoxyribonuclease III [Escherichia coli MS 196-1]
 gi|306908857|gb|EFN39353.1| exodeoxyribonuclease III [Escherichia coli W]
 gi|309701971|emb|CBJ01285.1| exodeoxyribonuclease III [Escherichia coli ETEC H10407]
 gi|310338062|gb|EFQ03151.1| exodeoxyribonuclease III [Escherichia coli 1827-70]
 gi|320173600|gb|EFW48793.1| Exodeoxyribonuclease III [Shigella dysenteriae CDC 74-1112]
 gi|320184212|gb|EFW59027.1| Exodeoxyribonuclease III [Shigella flexneri CDC 796-83]
 gi|320197933|gb|EFW72541.1| Exodeoxyribonuclease III [Escherichia coli EC4100B]
 gi|323153006|gb|EFZ39275.1| exodeoxyribonuclease III [Escherichia coli EPECa14]
 gi|323158544|gb|EFZ44559.1| exodeoxyribonuclease III [Escherichia coli E128010]
 gi|323166246|gb|EFZ52021.1| exodeoxyribonuclease III [Shigella sonnei 53G]
 gi|323175176|gb|EFZ60790.1| exodeoxyribonuclease III [Escherichia coli LT-68]
 gi|323180528|gb|EFZ66073.1| exodeoxyribonuclease III [Escherichia coli 1180]
 gi|323186233|gb|EFZ71585.1| exodeoxyribonuclease III [Escherichia coli 1357]
 gi|323378375|gb|ADX50643.1| exodeoxyribonuclease III [Escherichia coli KO11]
 gi|323937007|gb|EGB33287.1| exodeoxyribonuclease III [Escherichia coli E1520]
 gi|323940585|gb|EGB36776.1| exodeoxyribonuclease III [Escherichia coli E482]
 gi|323962060|gb|EGB57657.1| exodeoxyribonuclease III [Escherichia coli H489]
 gi|323974008|gb|EGB69179.1| exodeoxyribonuclease III [Escherichia coli TA007]
 gi|332096300|gb|EGJ01301.1| exodeoxyribonuclease III [Shigella boydii 3594-74]
 gi|332101449|gb|EGJ04795.1| exonuclease III [Shigella sp. D9]
          Length = 268

 Score =  203 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 78/266 (29%), Positives = 123/266 (46%), Gaps = 8/266 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A ++++ PD+I LQETK  D  FP E +  L Y++   GQK
Sbjct: 1   MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            + GVA+L+K  PI +    PGDD + Q R I A        + + N Y P G       
Sbjct: 61  GHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSLLGNVTVINGYFPQGESRDHPI 120

Query: 124 -YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
            +  K  + +    +    L+ + P++  GD NI P         +     +      F 
Sbjct: 121 KFPAKAQFYQNLQNYLETELKRDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+   +L + G  D  R  +      +S++DY +  +  N+G+RID ++ S      
Sbjct: 181 PEEREWMDRLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAEC 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
                ID + R   KPSDH PV  + 
Sbjct: 241 CVETGIDYEIRSMEKPSDHAPVWATF 266


>gi|319942253|ref|ZP_08016568.1| exodeoxyribonuclease III Xth [Sutterella wadsworthensis 3_1_45B]
 gi|319804126|gb|EFW01026.1| exodeoxyribonuclease III Xth [Sutterella wadsworthensis 3_1_45B]
          Length = 269

 Score =  203 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 80/269 (29%), Positives = 128/269 (47%), Gaps = 6/269 (2%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           MS + +A+WNVNS++ R+  +  W++    D + +QETKT D  FP        + +   
Sbjct: 1   MSRLRLASWNVNSLKVRLPQVLDWLESAKIDALVMQETKTTDDVFPQAAFAEAGFDVFFL 60

Query: 61  GQKSYNGVAILSKYQPIEIV------THLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           GQK+YNGVA+ S+   ++           P       +  +          +R    Y P
Sbjct: 61  GQKTYNGVALCSRQTTVKTSDVVLGLPGWPDPQKRFISALLSPLAAPEQPPIRFCGGYFP 120

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
           +G  + S+KY  K+ WI    R     L     L+  GD+NI P   D +NP  W     
Sbjct: 121 NGQAVGSSKYLYKLDWIAVLERTLKTYLADTPRLVLGGDFNIAPADADVWNPEAWRGKIL 180

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
            +   R++ ++L  +G  D+ R        +S+WDY    + +N G+RID +++S     
Sbjct: 181 CSEPERKALERLFALGLYDSFRLFTQPAERFSWWDYRQSGFERNHGLRIDLLLVSEALKG 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            + SA ID  PRG  +PSDH PV++ L +
Sbjct: 241 AVESASIDDGPRGNPQPSDHAPVMLDLSL 269


>gi|116668987|ref|YP_829920.1| exodeoxyribonuclease III [Arthrobacter sp. FB24]
 gi|116609096|gb|ABK01820.1| Exodeoxyribonuclease III [Arthrobacter sp. FB24]
          Length = 294

 Score =  203 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 78/267 (29%), Positives = 131/267 (49%), Gaps = 8/267 (2%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
            V +ATWNVNS+RAR   + AW++ ++ D++ +QETK +D NFP+E  + + Y +   G 
Sbjct: 26  TVKIATWNVNSLRARADRVEAWLERSDCDVLAIQETKCKDDNFPWELFERMGYEVAHFGV 85

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQA----RFIEATFTINTQTLRIGNLYLPHGNP 118
             +NGVAI+S+    ++        +  +                  +R+ +LY+P+G  
Sbjct: 86  SQWNGVAIVSRVGLEDVERSFVDQPVFGKNGKDAIQEARAIGATCGGVRVWSLYVPNGRA 145

Query: 119 ITSTKYDDKISWIKRFLRFASQRL--ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
           +       K+SW+      A   +    E  +   GD+NI PQ  D ++   +  +A   
Sbjct: 146 LDDEHMPYKLSWLDMLKTHAQAWVTENPEAQIALMGDWNIAPQDDDVWDIDFFRANAMTH 205

Query: 177 --LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
                R +F+  ++ GF D +R       +Y++WDY    + K +G+RID ++ SP   +
Sbjct: 206 VSEPERAAFRAFEDAGFQDVVRPHTPGPGVYTYWDYTQLRFPKKEGMRIDFVLASPALAA 265

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261
            +  A ID + R     SDH PVIV L
Sbjct: 266 RVTGASIDREERKGKGASDHAPVIVEL 292


>gi|238910880|ref|ZP_04654717.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Tennessee str. CDC07-0191]
          Length = 268

 Score =  203 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 77/268 (28%), Positives = 122/268 (45%), Gaps = 8/268 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A ++++ PD+I LQETK  D+ FP E +  L Y++   GQK
Sbjct: 1   MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDEMFPLEEVAKLGYNVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122
            + GVA+L+K  PI +    P D  + Q R I A        + + N Y P G       
Sbjct: 61  GHYGVALLTKATPISVRRGFPDDGEEAQRRIIMAEIPSPLGNITVINGYFPQGESRDHPL 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  + +    +    L+ + P++  GD NI P         +     +      F 
Sbjct: 121 KFPAKAQFYQNLQNYLETELKRDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+   +L   G  D  R  +      +S++DY +  +  N+G+RID ++ S      
Sbjct: 181 PEEREWMSRLLKWGLVDTFRQANPQTMDKFSWFDYRSKGFVDNRGLRIDLLLASAPLAER 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                ID   R   KPSDH PV  +  +
Sbjct: 241 CAETGIDYDIRSMEKPSDHAPVWATFRV 268


>gi|239999627|ref|ZP_04719551.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae 35/02]
 gi|240017251|ref|ZP_04723791.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae FA6140]
 gi|240081112|ref|ZP_04725655.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae FA19]
 gi|240118615|ref|ZP_04732677.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae PID1]
 gi|240124158|ref|ZP_04737114.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae PID332]
 gi|240126225|ref|ZP_04739111.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae SK-92-679]
 gi|240128828|ref|ZP_04741489.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae
           SK-93-1035]
 gi|254494342|ref|ZP_05107513.1| exodeoxyribonuclease III [Neisseria gonorrhoeae 1291]
 gi|268595439|ref|ZP_06129606.1| exodeoxyribonuclease III [Neisseria gonorrhoeae 35/02]
 gi|268597223|ref|ZP_06131390.1| exodeoxyribonuclease III [Neisseria gonorrhoeae FA19]
 gi|268604327|ref|ZP_06138494.1| exodeoxyribonuclease III [Neisseria gonorrhoeae PID1]
 gi|268682783|ref|ZP_06149645.1| exodeoxyribonuclease III [Neisseria gonorrhoeae PID332]
 gi|268684808|ref|ZP_06151670.1| exodeoxyribonuclease III [Neisseria gonorrhoeae SK-92-679]
 gi|268687210|ref|ZP_06154072.1| exodeoxyribonuclease III [Neisseria gonorrhoeae SK-93-1035]
 gi|293398467|ref|ZP_06642645.1| exodeoxyribonuclease III [Neisseria gonorrhoeae F62]
 gi|226513382|gb|EEH62727.1| exodeoxyribonuclease III [Neisseria gonorrhoeae 1291]
 gi|268548828|gb|EEZ44246.1| exodeoxyribonuclease III [Neisseria gonorrhoeae 35/02]
 gi|268551011|gb|EEZ46030.1| exodeoxyribonuclease III [Neisseria gonorrhoeae FA19]
 gi|268588458|gb|EEZ53134.1| exodeoxyribonuclease III [Neisseria gonorrhoeae PID1]
 gi|268623067|gb|EEZ55467.1| exodeoxyribonuclease III [Neisseria gonorrhoeae PID332]
 gi|268625092|gb|EEZ57492.1| exodeoxyribonuclease III [Neisseria gonorrhoeae SK-92-679]
 gi|268627494|gb|EEZ59894.1| exodeoxyribonuclease III [Neisseria gonorrhoeae SK-93-1035]
 gi|291610938|gb|EFF40035.1| exodeoxyribonuclease III [Neisseria gonorrhoeae F62]
 gi|317164881|gb|ADV08422.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae
           TCDC-NG08107]
          Length = 256

 Score =  203 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 91/260 (35%), Positives = 136/260 (52%), Gaps = 4/260 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + TWNVNS+  R+  +   + +N PDI+ LQE K +   FP   LQ + +H    GQK
Sbjct: 1   MKITTWNVNSLNVRLPQVQNLLADNPPDILVLQELKLDQDKFPAAALQMMGWHCVWSGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAI+S+  P ++   LP    D Q R I AT       +R+ N+Y  +G  + S K
Sbjct: 61  TYNGVAIISRSVPQDVHFGLPSLPDDPQRRVIAATVGG----VRVINVYCVNGEALDSPK 116

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K  W      F    +     L+  GD+NI P   DCY+P  W      +   RQ F
Sbjct: 117 FKYKEQWFAALTEFVRDEMTRHGKLVLLGDFNIAPADADCYDPEKWYEKIHCSSVERQWF 176

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q L ++G TD++R  H     Y+++DY    + +  G+RIDHI+++ E  ++L   RID 
Sbjct: 177 QNLLDLGLTDSLRQVHPEGAFYTWFDYRGAMFQRKLGLRIDHILVTSEMAAVLKDVRIDL 236

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
           + R   +PSDH PV    D+
Sbjct: 237 ETRALERPSDHAPVAAEFDL 256


>gi|33239934|ref|NP_874876.1| exonuclease III [Prochlorococcus marinus subsp. marinus str.
           CCMP1375]
 gi|33237460|gb|AAP99528.1| Exonuclease III [Prochlorococcus marinus subsp. marinus str.
           CCMP1375]
          Length = 276

 Score =  203 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 95/274 (34%), Positives = 151/274 (55%), Gaps = 5/274 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +  ATWNVNSIR R+  +  ++ E  PD++CLQETK EDK FP E+++   Y +   GQK
Sbjct: 1   MLFATWNVNSIRTRLSQVEEFLDETQPDLLCLQETKVEDKLFPRESIEKRGYQVSFYGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT----QTLRIGNLYLPHGNPI 119
           +YNGVA++S  +  +I   + G+ ++ Q                  +R+ N+Y+P+G+ +
Sbjct: 61  AYNGVALISNQKLDDIRLGISGELVNNQVSTFLDEQKRIISALINGIRVVNVYVPNGSSL 120

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
            S KY  K+ W+    ++   + E  EPL   GD+NI+ +  D +NP  + N    +L  
Sbjct: 121 DSEKYIYKLKWLDHLKKYFESQEERSEPLCLMGDFNIVLEEKDIHNPKRFNNGIMASLSE 180

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R++ Q +      D  R        +S+WDY + +W K++G RIDHI LS E  +   S 
Sbjct: 181 REALQNVLGTRLEDVFRLFEADTGHWSWWDYRSGAWQKDQGWRIDHIYLSEELINNARSC 240

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDS 273
            I  K RG  +PSDH PV+V ++ P P++  ++S
Sbjct: 241 VIHKKARGNIQPSDHAPVLVDINWP-PQEDNENS 273


>gi|255530789|ref|YP_003091161.1| exodeoxyribonuclease III Xth [Pedobacter heparinus DSM 2366]
 gi|255343773|gb|ACU03099.1| exodeoxyribonuclease III Xth [Pedobacter heparinus DSM 2366]
          Length = 264

 Score =  203 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 99/267 (37%), Positives = 144/267 (53%), Gaps = 5/267 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A++N+N I AR+ NL  W+KE  PD++CLQE K  D  FP + L    YH    GQK
Sbjct: 1   MKIASYNINGINARLDNLLRWLKEARPDVVCLQELKAPDNRFPAQLLLDAGYHAIWHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           S+NGVAILS+Y  I+                           + IG LYLP+GNP    K
Sbjct: 61  SWNGVAILSRYAEIKETRRGL---EGDPEDLHSRYIEAFINGVVIGCLYLPNGNPFPGPK 117

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           ++ K++WIKR  + A++      P+   GDYNIIP   D Y P  +  +A F  E R+ +
Sbjct: 118 FEYKLNWIKRLTKHAAKLNAFGLPVALVGDYNIIPTDLDTYKPEKYLENALFRPEARKLW 177

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             L   G+TDA R  +    +Y+FWDY  +++ ++ G+R+DH +L+ +    L +A +D 
Sbjct: 178 TALLKQGWTDAFRKLYPKDRIYTFWDYLRNAYHRDAGLRLDHFLLNDKLVDRLDAAGVDK 237

Query: 244 KPRGWTKPSDHTPVIVSLD--IPEPRK 268
             RGW   SDH PV V L   +P+  K
Sbjct: 238 HVRGWDHSSDHAPVWVVLKDHLPDQAK 264


>gi|30062986|ref|NP_837157.1| exonuclease III [Shigella flexneri 2a str. 2457T]
 gi|30041235|gb|AAP16964.1| exonuclease III [Shigella flexneri 2a str. 2457T]
 gi|281600889|gb|ADA73873.1| Exonuclease III [Shigella flexneri 2002017]
 gi|313649224|gb|EFS13658.1| exodeoxyribonuclease III [Shigella flexneri 2a str. 2457T]
          Length = 268

 Score =  203 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 78/266 (29%), Positives = 123/266 (46%), Gaps = 8/266 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A ++++ PD+I LQETK  D  FP E +  L Y++   GQK
Sbjct: 1   MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            + GVA+L+K  PI +    PGDD + Q R I A        + + N Y P G       
Sbjct: 61  GHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSLLGNVTVINGYFPQGESRDHPI 120

Query: 124 -YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
            +  K  + +    +    L+ + P++  GD NI P         +     +      F 
Sbjct: 121 KFPAKAQFYQNLQNYLETELKRDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+   +L + G  D  R  +      +S++DY +  +  N+G+RID ++ S      
Sbjct: 181 PEEREWMDRLMSWGVVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAEC 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
                ID + R   KPSDH PV  + 
Sbjct: 241 CVETGIDYEIRSMEKPSDHAPVWATF 266


>gi|325267794|ref|ZP_08134444.1| exodeoxyribonuclease III [Kingella denitrificans ATCC 33394]
 gi|324980675|gb|EGC16337.1| exodeoxyribonuclease III [Kingella denitrificans ATCC 33394]
          Length = 258

 Score =  203 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 91/259 (35%), Positives = 136/259 (52%), Gaps = 4/259 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + TWNVNS+  R+ ++  W+ ++ PDI+ LQE K E   FP   L  + +     GQK
Sbjct: 1   MKICTWNVNSLNVRLPHVTDWLAQHQPDILVLQELKLEHDKFPVAALNMMGWQCAWSGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAI+S++   ++ T LP    D Q R I AT       +R+ N+Y  +G  + S K
Sbjct: 61  TYNGVAIISRHAIKDVHTGLPALPDDPQQRVIAATVNG----VRVVNVYCVNGESLDSEK 116

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K  W      F  Q+++    L+  GD+NI P   D Y+P  W      + E R  F
Sbjct: 117 FAYKRQWFAALTDFIRQQMQQYPKLVLLGDFNIAPTDDDVYDPEKWREHIHCSSEERAWF 176

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q L ++G TD +R  H T   Y++WDY    + +  G+RIDHI+ +     +L   +IDT
Sbjct: 177 QALLDLGLTDCLRHVHPTGAHYTWWDYRGAMFQRKLGLRIDHILATAALRDVLRDVQIDT 236

Query: 244 KPRGWTKPSDHTPVIVSLD 262
           + R   +PSDH PV    D
Sbjct: 237 EARAKERPSDHAPVFALFD 255


>gi|259908294|ref|YP_002648650.1| Exodeoxyribonuclease III [Erwinia pyrifoliae Ep1/96]
 gi|224963916|emb|CAX55420.1| Exodeoxyribonuclease III [Erwinia pyrifoliae Ep1/96]
          Length = 268

 Score =  203 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 81/266 (30%), Positives = 122/266 (45%), Gaps = 8/266 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A ++++ PD+I LQETK  D  FP E + SL YH+   GQK
Sbjct: 1   MKFVSFNINGLRARPHQLQAIVEQHQPDVIGLQETKVHDDMFPLEEVASLGYHVFCHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122
            + GVA+L K QP+ +     GD+ D Q R I A        L + N Y P G       
Sbjct: 61  GHYGVALLCKQQPVAVRRGFAGDNEDAQRRIIMADILTPAGPLTVINGYFPQGESRDHPT 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  + +    +  Q+ + +  L+  GD NI           +     +      F 
Sbjct: 121 KFPAKEKFYRDLQSYLEQQQKADNQLLIMGDMNISSSDLDIGIGEESRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+    L N G  D  R  +   +  +S++DY +  +  N+G+RID I+ S      
Sbjct: 181 PEEREWMSTLMNWGLYDTWRTQNATVNDRFSWFDYRSKGFDDNRGLRIDLILASRPLADR 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
             +  ID   R   KPSDH P+    
Sbjct: 241 CVATGIDYDIRAMEKPSDHAPIWAEF 266


>gi|161486214|ref|NP_754044.2| exonuclease III [Escherichia coli CFT073]
          Length = 268

 Score =  203 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 79/266 (29%), Positives = 124/266 (46%), Gaps = 8/266 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A ++++ PD+I LQETK  D  FP E +  L Y++   GQK
Sbjct: 1   MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            + GVA+L+K  PI +    PGDD + Q R I A        + + N Y P G       
Sbjct: 61  GHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSPLGNVTVINGYFPQGESRDHPI 120

Query: 124 -YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
            +  K  + +    +    L+ E P++  GD NI P         +     +      F 
Sbjct: 121 KFSAKAQFYQNLQNYLETELKRENPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+  ++L + G  D  R  +      +S++DY +  +  N+G+RID ++ S      
Sbjct: 181 PEEREWMERLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAEC 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
                ID + R   KPSDH PV  + 
Sbjct: 241 CVETGIDYEIRSMEKPSDHAPVWATF 266


>gi|190891414|ref|YP_001977956.1| exodeoxyribonuclease III protein [Rhizobium etli CIAT 652]
 gi|218516597|ref|ZP_03513437.1| exodeoxyribonuclease III protein [Rhizobium etli 8C-3]
 gi|190696693|gb|ACE90778.1| exodeoxyribonuclease III protein [Rhizobium etli CIAT 652]
          Length = 263

 Score =  203 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 116/262 (44%), Positives = 162/262 (61%), Gaps = 5/262 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+NVN I  R+  L  W+KE+ PD++CLQE KT+D  FP    +   Y     GQ+
Sbjct: 1   MKIATYNVNGINGRLDILLRWLKEDAPDVVCLQELKTDDAKFPRTETERAGYGAVWHGQR 60

Query: 64  SYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           S+NGVAIL+K   PI     LPGD  D  +R+IEA          IG LYLP+GNP  S 
Sbjct: 61  SWNGVAILAKGKTPILTRRGLPGDPDDTHSRYIEAAVDGM----LIGCLYLPNGNPFPSA 116

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           K++ K+ W +R   +A++ LE+E P I AGD+N++P   D Y P  W +DA F  EVR +
Sbjct: 117 KFEYKLRWFRRLSAYAAELLEIEVPSILAGDFNVMPTEIDVYKPERWLDDALFRPEVRNA 176

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           + +L   G+TDA+R  H    +Y+FW Y+ +S+ ++ G+RIDH++LSP     L SA + 
Sbjct: 177 YAQLVAQGWTDAVRHLHPGERIYTFWKYWRNSFERDAGLRIDHLLLSPTVAPWLRSASVR 236

Query: 243 TKPRGWTKPSDHTPVIVSLDIP 264
            KPRGW   SDH PV++ LDIP
Sbjct: 237 RKPRGWEHTSDHAPVVIELDIP 258


>gi|160872135|ref|ZP_02062267.1| exodeoxyribonuclease III [Rickettsiella grylli]
 gi|159120934|gb|EDP46272.1| exodeoxyribonuclease III [Rickettsiella grylli]
          Length = 261

 Score =  203 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 90/260 (34%), Positives = 144/260 (55%), Gaps = 5/260 (1%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
            +  +ATWN+NS+R R+ ++  W+  + P ++ LQETK ++ +FP E  +   YH+   G
Sbjct: 3   RLFKIATWNINSLRIRLAHVLTWLNTHQPHLLALQETKVQNHHFPEEPFKRAGYHVLYNG 62

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           QK+YNGVA +S+      VT      L            +   +LRI N+Y+P+G+ + S
Sbjct: 63  QKTYNGVAFISRIPMQNEVT-----CLPHFDDTQRRILVVTIGSLRIVNIYVPNGSHLGS 117

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            K+  K+ W+K+   +    L L   LI  GD+NI P+ +D ++P IW+     + + R+
Sbjct: 118 EKFLYKLKWLKQLKIYLQHELSLHPSLIVLGDFNIAPKDNDVHDPQIWQGKVLVSPQERK 177

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           + Q +  +G  D+ R  H+  H Y++WDY A ++ +N G+RIDHI+ S    S      I
Sbjct: 178 ALQDIVALGLKDSFRLFHNEPHQYTWWDYRAGAFRRNHGLRIDHILSSTHLISQCIDCEI 237

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
           D + R W KPSDH PVI + 
Sbjct: 238 DKEIRRWEKPSDHVPVIATY 257


>gi|254247764|ref|ZP_04941085.1| Exonuclease III [Burkholderia cenocepacia PC184]
 gi|124872540|gb|EAY64256.1| Exonuclease III [Burkholderia cenocepacia PC184]
          Length = 258

 Score =  203 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 84/256 (32%), Positives = 133/256 (51%), Gaps = 1/256 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+  R  ++  W+ ++  D++CLQE K  D+ FP   L+++ Y     GQK
Sbjct: 1   MKIATWNVNSLNVRKQHVLDWLAQSGTDVLCLQELKLPDEKFPRADLEAVGYRSWFTGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAIL +   + +       ++       +         +RI + Y P+G  + S K
Sbjct: 61  TYNGVAILVRDT-LAVDESDVVRNIPGFDDPQQRVIAATVDGVRIVSAYFPNGQALDSDK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W+     +    L+    L   GDYNI P+  D ++P  WE     + + R  F
Sbjct: 120 FVYKMQWLDALQAWLRTELQRYPKLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            +L  +GF DA R        +++WDY   ++ +N G+RIDHI+LSP   +   S  +D 
Sbjct: 180 AQLIELGFVDAFRRFEQPEKTFTWWDYRMMAFRRNAGLRIDHILLSPALAATCASCEVDR 239

Query: 244 KPRGWTKPSDHTPVIV 259
            PR W +PSDHTPV+ 
Sbjct: 240 TPRTWEQPSDHTPVVA 255


>gi|153837336|ref|ZP_01990003.1| exodeoxyribonuclease III [Vibrio parahaemolyticus AQ3810]
 gi|260903451|ref|ZP_05911846.1| exodeoxyribonuclease III [Vibrio parahaemolyticus AQ4037]
 gi|149749367|gb|EDM60140.1| exodeoxyribonuclease III [Vibrio parahaemolyticus AQ3810]
 gi|308110362|gb|EFO47902.1| exodeoxyribonuclease III [Vibrio parahaemolyticus AQ4037]
          Length = 268

 Score =  203 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 81/268 (30%), Positives = 133/268 (49%), Gaps = 9/268 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V ++N+N +RAR+H L A I ++ PD+I LQE K  D+ FP E ++++ Y +   GQK
Sbjct: 1   MKVISFNINGLRARLHQLQALIDKHQPDVIGLQEIKVHDEAFPIEDVEAMGYKVYFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121
           ++ GVA+L K +PI +    P  ++   +   +      N + + + N Y P G+ I+  
Sbjct: 61  AHYGVAMLCKQEPIRVQKGFPTDNEEHQKRMIMATFENENGEKVTVLNGYFPQGDNISHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175
           TK+  K  + K  + + +     +E LI  GD NI P               +      F
Sbjct: 121 TKFPYKRQFYKDLMTYLNDHHSNDEQLIVMGDINISPIDSDIGIGEPNRKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R+  Q L N GF D  R  +   +  +S++DY +  +  N+G+RID I+ +P    
Sbjct: 181 QPEEREWLQTLLNWGFEDTFRKLYPEVNDRFSWFDYRSRGFDDNRGLRIDVILATPSLAQ 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
               + ID + RG  KPSDH P+  +  
Sbjct: 241 KCIESGIDYELRGIEKPSDHAPIWSTFK 268


>gi|113969789|ref|YP_733582.1| exonuclease III [Shewanella sp. MR-4]
 gi|113884473|gb|ABI38525.1| Exodeoxyribonuclease III [Shewanella sp. MR-4]
          Length = 270

 Score =  203 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 86/268 (32%), Positives = 130/268 (48%), Gaps = 9/268 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +R+R+H L A I  + PDII LQETK  D+ FP   ++++ YH+   G K
Sbjct: 1   MKIVSFNINGLRSRLHQLQALIDSHQPDIIGLQETKVHDEAFPLAEVEAMGYHVHYHGGK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122
           ++ GVA+LSK  PI++      D  D Q R I  TF   N + L + N Y P G  I   
Sbjct: 61  AHYGVAMLSKVAPIKVQKGFATDGEDAQRRMIIGTFAQANGRPLTVLNGYFPQGESIDHP 120

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175
            KY  K  + +  +         +E +   GD NI P   D           +      F
Sbjct: 121 TKYPAKRKFYQDLMAHLHANHSNDEDIAIIGDINISPIDLDIGIGEVNRKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R+  + LQ+ G  D  R  H      YS++DY +  +  N+G+RID I+ +P   +
Sbjct: 181 QPEEREWLKTLQDWGLVDTFRQLHPDRSERYSWFDYRSKGFDDNRGLRIDVILATPSLAA 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
            L  + +D   RG  KPSDH P+  +  
Sbjct: 241 RLVESDVDYDLRGIDKPSDHAPIWSTFK 268


>gi|148977573|ref|ZP_01814152.1| exonuclease III [Vibrionales bacterium SWAT-3]
 gi|145963224|gb|EDK28491.1| exonuclease III [Vibrionales bacterium SWAT-3]
          Length = 268

 Score =  203 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 79/268 (29%), Positives = 130/268 (48%), Gaps = 9/268 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V ++N+N +RAR+H L A I ++ PD+I LQE K  D+ FP   ++++ Y +   GQK
Sbjct: 1   MKVISFNINGLRARLHQLQAVIDKHQPDVIGLQEIKVHDEAFPIADVEAMGYKVYFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121
           ++ GVA+L K +PI +    P  ++   +   +      N + + + N Y P G+ I   
Sbjct: 61  AHYGVAMLCKQEPISVQKGFPTDNEDHQKRMIMATFEDENGEKVTVLNGYFPQGDNIKHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175
           TKY  K  + K  + + +     +E +I  GD NI P               +      F
Sbjct: 121 TKYPYKREFYKDLMTYLNDYHNNDEQIIVMGDINISPIDADIGIGEPNAKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R+  + L + GF D  R  H      YS++DY +  +  N+G+RID ++ + +   
Sbjct: 181 QPEEREWLKALMDWGFVDTFRQLHPEVTDQYSWFDYRSKGFLDNRGLRIDVVLATQKLAD 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
               A ID + RG  KPSDH P+  +  
Sbjct: 241 KCTEAGIDYELRGIEKPSDHAPIWSTFK 268


>gi|159029855|emb|CAO90909.1| xthA [Microcystis aeruginosa PCC 7806]
          Length = 262

 Score =  203 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 93/262 (35%), Positives = 149/262 (56%), Gaps = 4/262 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSIR+R   +  W++ N  +++CLQETK  D++FP E  +SL YH+   GQK
Sbjct: 1   MKIATWNVNSIRSRQDQVINWLQLNPVEVLCLQETKVIDRDFPREAFESLGYHLYISGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHL---PGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           +YNGVAI S+    +I        G++L  +    +   T     +RI NLY+P+G+ + 
Sbjct: 61  AYNGVAIFSQKPLDDITVGFSPIIGENLTGELDEQKRLITGVIGDIRIINLYVPNGSSLD 120

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPL-IFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
           S KY  K+ W++   ++  + +  +       GD+NI  +  D Y+P   EN    + + 
Sbjct: 121 SDKYIYKLKWLETLRKYLDKIINSQPQELCICGDFNIALEDKDIYDPKGKENHIMSSAKE 180

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R++ +K+  +G  DA R        YS+WDY +  +++N+G RIDH+ L+P+      + 
Sbjct: 181 REALEKVLEIGLQDAFRKFTSAAGHYSWWDYRSGGFARNRGWRIDHLYLTPQLYEKAVNC 240

Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261
            ID +PR   KPSDHTPVI+ +
Sbjct: 241 LIDREPRKQEKPSDHTPVILEI 262


>gi|152969774|ref|YP_001334883.1| exonuclease III [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
 gi|330012539|ref|ZP_08307413.1| exodeoxyribonuclease III [Klebsiella sp. MS 92-3]
 gi|150954623|gb|ABR76653.1| exonuclease III [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
 gi|328533786|gb|EGF60471.1| exodeoxyribonuclease III [Klebsiella sp. MS 92-3]
          Length = 268

 Score =  203 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 82/266 (30%), Positives = 126/266 (47%), Gaps = 8/266 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H LAA ++++ PD+I LQETK  D  FP E +  L Y++   GQK
Sbjct: 1   MKFVSFNINGLRARPHQLAAIVEKHQPDVIGLQETKVHDDMFPLEEVARLGYNVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122
            + GVA+L+K  PI +    P D  + Q R I A        + + N Y P G      T
Sbjct: 61  GHYGVALLTKETPIAVRRGFPDDGEEAQRRIIMAEIPSPFGNVTVINGYFPQGESRDHET 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K ++ +    +    L  E P++  GD NI P         +     +      F 
Sbjct: 121 KFPAKAAFYQNLQNYLETELNKENPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHH-LYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+   +L   G  D  R  +  +H  +S++DY +  +  N+G+RID ++ S      
Sbjct: 181 PEEREWMDRLLGWGLVDTWRQANPDNHEHFSWFDYRSKGFDDNRGLRIDLLLASQPLAQR 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
                ID + RG  KPSDH PV  + 
Sbjct: 241 CVETGIDYEIRGMEKPSDHAPVWATF 266


>gi|262404202|ref|ZP_06080757.1| exodeoxyribonuclease III [Vibrio sp. RC586]
 gi|262349234|gb|EEY98372.1| exodeoxyribonuclease III [Vibrio sp. RC586]
          Length = 268

 Score =  203 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 79/268 (29%), Positives = 127/268 (47%), Gaps = 9/268 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V ++N+N +RAR+H L A I ++ PD+I LQE K  D  FP + ++++ Y +   GQK
Sbjct: 1   MKVISFNINGLRARLHQLQALIDKHQPDVIGLQEIKVHDDAFPRQEVEAMGYQVYFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGD-DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121
           ++ GVAIL K  P+E++   P D +   +   +      +     I N Y P G+ +   
Sbjct: 61  AHYGVAILCKQTPVEVIKGFPTDSEEHQKRMIMATFVDQDGNKTTILNGYFPQGDNVEHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175
           TK+  K  + +  + +  +     E L+  GD NI P               +      F
Sbjct: 121 TKFPYKRQFYRDLMTYLGEHRSNAERLVVMGDINISPLDLDIGIGEANRKRWLQTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R+  Q L + G  D  R  H      +S++DY +  +  N+G+RID I+ +P    
Sbjct: 181 QPEEREWLQSLMDWGLVDTFRQLHPEVSDQFSWFDYRSRGFDDNRGLRIDVILATPTLAE 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
               A ID + RG  KPSDH P+  +  
Sbjct: 241 TCQEAGIDYELRGIDKPSDHAPIWATFK 268


>gi|86146435|ref|ZP_01064758.1| exodeoxyribonuclease III [Vibrio sp. MED222]
 gi|85835698|gb|EAQ53833.1| exodeoxyribonuclease III [Vibrio sp. MED222]
          Length = 268

 Score =  203 bits (515), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 79/268 (29%), Positives = 132/268 (49%), Gaps = 9/268 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V ++N+N +RAR+H L A I ++ PD+I LQE K  D+ FP   ++++ Y +   GQK
Sbjct: 1   MKVISFNINGLRARLHQLQAIIDKHQPDVIGLQEIKVHDEAFPLADVEAMGYKVYFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121
           ++ GVA+L K +PI +    P  ++   +   +      N + + + N Y P G+ I   
Sbjct: 61  AHYGVAMLCKQEPISVQKGFPTDNEDHQKRMIMATFEDDNGEKITVLNGYFPQGDNIKHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175
           TKY  K  + K  + + +     +E +I  GD NI P               +      F
Sbjct: 121 TKYPYKREFYKDLMTYLNDYHNKDEQVIVMGDINISPTDIDIGIGEPNAKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R+  + L + GF D+ R  H   +  YS++DY +  +  N+G+RID ++ + +   
Sbjct: 181 QPEEREWLKTLMDWGFVDSFRLLHPEVNDQYSWFDYRSKGFVDNRGLRIDVVLATQKLAD 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
               A ID + RG  KPSDH P+  +  
Sbjct: 241 KCTEAGIDYELRGIEKPSDHAPIWSTFK 268


>gi|294012654|ref|YP_003546114.1| exodeoxyribonuclease III [Sphingobium japonicum UT26S]
 gi|292675984|dbj|BAI97502.1| exodeoxyribonuclease III [Sphingobium japonicum UT26S]
          Length = 256

 Score =  202 bits (514), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 104/259 (40%), Positives = 152/259 (58%), Gaps = 5/259 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+N+N I+AR+  L  W+ E  PDI CLQE KT D  FP   ++ + Y     GQK
Sbjct: 1   MRIATFNINGIKARLPRLLEWLDETRPDIACLQEIKTSDDTFPVRDIEDVGYGAIWHGQK 60

Query: 64  SYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
            +NGVAIL++   P+E+   L G+  D  +R++EA        LR+ ++YLP+GNP    
Sbjct: 61  GFNGVAILARGETPVEVRRGLEGEPEDEHSRYLEADVKG----LRVASIYLPNGNPQPGP 116

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           K+D K+ W+KR    A+Q    E P I AGDYN+IP+  D Y+      DA    E R +
Sbjct: 117 KFDYKLRWMKRLRDRAAQIWAEEVPAILAGDYNVIPRDRDVYSVKAMAEDALMQPESRAA 176

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           +++L   G+TDAI + H    ++++WDY  ++W ++ G RIDH++LSP A   L  A++D
Sbjct: 177 YRRLLGDGWTDAIASRHPAGRVWTYWDYQMNAWPRDAGFRIDHLLLSPAAADRLIDAQVD 236

Query: 243 TKPRGWTKPSDHTPVIVSL 261
              RG  K SDH P  V L
Sbjct: 237 KDFRGREKASDHAPTWVEL 255


>gi|255326144|ref|ZP_05367231.1| exodeoxyribonuclease III [Rothia mucilaginosa ATCC 25296]
 gi|255296855|gb|EET76185.1| exodeoxyribonuclease III [Rothia mucilaginosa ATCC 25296]
          Length = 288

 Score =  202 bits (514), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 71/264 (26%), Positives = 124/264 (46%), Gaps = 6/264 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+NSIRAR + +  W+ E++ D++ LQETKT+D+ FPF+  + + Y +   G  
Sbjct: 23  MKIATWNINSIRARENRVEDWLDEHDVDVLALQETKTKDETFPFDLFEFMGYEVAHFGLN 82

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIE----ATFTINTQTLRIGNLYLPHGNPI 119
            +NGVAI S+    ++           +    E             +R+ +LY+P+G  +
Sbjct: 83  QWNGVAIASRVGLEDVQRGFDNQPHFGKTGEPEVLEARAIGATCGGVRVWSLYVPNGRGL 142

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL 177
           T    D K+ W++   +     L           GD+N+ P+  D ++   +  +    +
Sbjct: 143 TDPHMDYKLRWMEALRQNVHNELADNPQSQLALVGDWNVAPEDADVWDIDYFLRNEMTHV 202

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
              +       +           T   Y++WDY A  ++K++G+RID  + SP   + + 
Sbjct: 203 SAPERRAFAALLEEGMVDVVRPHTPGEYTYWDYQAGRFTKDEGMRIDFQLFSPALAARVE 262

Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261
            A ID   R     SDHTPV+V +
Sbjct: 263 RAWIDKVERAGEGASDHTPVVVEI 286


>gi|82776806|ref|YP_403155.1| exonuclease III [Shigella dysenteriae Sd197]
 gi|309788829|ref|ZP_07683424.1| exodeoxyribonuclease III [Shigella dysenteriae 1617]
 gi|81240954|gb|ABB61664.1| exonuclease III [Shigella dysenteriae Sd197]
 gi|308923100|gb|EFP68612.1| exodeoxyribonuclease III [Shigella dysenteriae 1617]
          Length = 268

 Score =  202 bits (514), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 77/266 (28%), Positives = 122/266 (45%), Gaps = 8/266 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A + ++ PD+I LQETK  D  FP E +  L Y++   GQK
Sbjct: 1   MKFVSFNINGLRARPHQLEAIVDKHQPDVIGLQETKVHDDMFPLEDVAKLGYNVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            + GVA+L+K  PI +    PGD  + Q R I A        + + N Y P G       
Sbjct: 61  GHYGVALLTKETPIAVRRGFPGDGEEAQRRIIMAEIPSPLGNVTVINGYFPQGERRDHPI 120

Query: 124 -YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
            +  K  + +    +    L+ + P++  GD NI P         +     +      F 
Sbjct: 121 KFPAKAQFYQNLQNYLETELKRDNPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+  ++L + G  D  R  +      +S++DY +  +  N+G+RID ++ S      
Sbjct: 181 PEEREWMERLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAEC 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
                ID + R   KPSDH PV  + 
Sbjct: 241 CVETGIDYEIRSMEKPSDHAPVWATF 266


>gi|260642288|ref|ZP_05415267.2| exodeoxyribonuclease III [Bacteroides finegoldii DSM 17565]
 gi|260622802|gb|EEX45673.1| exodeoxyribonuclease III [Bacteroides finegoldii DSM 17565]
          Length = 255

 Score =  202 bits (514), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 83/263 (31%), Positives = 140/263 (53%), Gaps = 12/263 (4%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59
           ++ + T+NVN +RA +      W+ + NPDI+CLQETK +   +P E  ++L Y  ++ +
Sbjct: 1   MMKIITYNVNGLRAAVSKGFPEWLAQENPDILCLQETKLQPDQYPAEVFEALGYKSYLYS 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GVAIL+K +P  +   +  +  D + RFI A F      L + ++Y P G   
Sbjct: 61  AQKKGYSGVAILTKQEPDHVEYGMGIEAYDNEGRFIRADFG----DLSVVSVYHPSG-TS 115

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +   K+ W++ F ++ ++  +    LI  GDYNI  +P D ++P+    ++ F  E 
Sbjct: 116 GDERQAFKMVWLEDFQKYVTELRKTRPNLILCGDYNICHEPIDIHDPVRNAKNSGFLPEE 175

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R+   +  + GF D+ R  +     Y++W Y  +S +KNKG RID+ M S      L SA
Sbjct: 176 REWMTRFLSAGFIDSFRLLYPEKQEYTWWSYRFNSRAKNKGWRIDYCMTSEPVRRWLKSA 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
           RI  +       SDH P+++ +D
Sbjct: 236 RILNEA----VHSDHCPMVLEID 254


>gi|312881205|ref|ZP_07741003.1| exonuclease III [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309371097|gb|EFP98551.1| exonuclease III [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 268

 Score =  202 bits (514), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 85/268 (31%), Positives = 134/268 (50%), Gaps = 9/268 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V ++N+N +RAR+H L A I ++ PD+I LQE K  D+ FP E ++++ Y +   GQK
Sbjct: 1   MKVISFNINGLRARLHQLQAVIDKHQPDVIGLQEIKVHDEAFPLEDVEAMGYKVYFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITS- 121
           ++ GVA+L K +PI +    P D+ D Q R I  T    N + + + N Y P G+ I   
Sbjct: 61  AHYGVAMLCKKEPISVQKGFPTDNDDHQKRMIMVTMEDDNGEKVTVLNGYFPQGDNIEHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175
           TKY  K  + K  + + +     +E LI  GD NI P               +      F
Sbjct: 121 TKYPYKRQFYKDLMTYLNDHHTNDEQLIVMGDINISPIDADIGIGEPNRKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R+  + L + G  D  R  H      +S++DY +  +  N+G+RID ++ +P+   
Sbjct: 181 QPEEREWLKTLLDWGLVDTFRQIHPEVEDRFSWFDYRSRGFDDNRGLRIDVVLATPKLAE 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
               + ID + RG  KPSDH P+  +  
Sbjct: 241 KCTESDIDYELRGIEKPSDHAPIWSTFK 268


>gi|170749328|ref|YP_001755588.1| exodeoxyribonuclease III Xth [Methylobacterium radiotolerans JCM
           2831]
 gi|170655850|gb|ACB24905.1| exodeoxyribonuclease III Xth [Methylobacterium radiotolerans JCM
           2831]
          Length = 264

 Score =  202 bits (514), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 112/261 (42%), Positives = 165/261 (63%), Gaps = 3/261 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + TWNVNSI+ R+ +L  +++E  PD++CLQE K +D++FP   +++  Y +ET GQK
Sbjct: 1   MRITTWNVNSIKQRLPHLLGFLEEARPDVVCLQELKCQDESFPRADIEAAGYAVETLGQK 60

Query: 64  SYNGV--AILSKYQPIEIVTHLPGDDLDVQARFIEATFTI-NTQTLRIGNLYLPHGNPIT 120
           +YNGV   + +     +I   LPGD  D QAR+IEA  +  +T+ +R+ ++YLP+GNP+ 
Sbjct: 61  AYNGVALLVRAPLAMSKIRRGLPGDADDAQARYIEALISGADTRPVRVASIYLPNGNPVD 120

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
           S KY  K+++++R    A   LE E  ++ AGDYN+IP+  D  +P  W +DA F    R
Sbjct: 121 SPKYPYKLAFLERLRLHARALLEDEIAVVLAGDYNVIPEAADAADPEAWRSDALFLGTTR 180

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            +F+ +   G+TDA+RA      LY+FWDY A  W +N GIRIDH++LSP+A   L SA 
Sbjct: 181 AAFRAILAEGYTDALRACDPRDGLYTFWDYQAGCWQRNAGIRIDHLLLSPQAGDRLVSAS 240

Query: 241 IDTKPRGWTKPSDHTPVIVSL 261
           +    RG  KPSDH PV   L
Sbjct: 241 VQKHLRGLDKPSDHVPVTAEL 261


>gi|254506149|ref|ZP_05118293.1| exodeoxyribonuclease III [Vibrio parahaemolyticus 16]
 gi|219550967|gb|EED27948.1| exodeoxyribonuclease III [Vibrio parahaemolyticus 16]
          Length = 268

 Score =  202 bits (514), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 88/268 (32%), Positives = 137/268 (51%), Gaps = 9/268 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V ++N+N +RAR+H L A I ++ PD+I LQE K  D+ FP E ++++ Y +   GQK
Sbjct: 1   MKVISFNINGLRARLHQLQAVIDKHQPDVIGLQEIKVHDEAFPLEDVEAMGYKVYFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT-FTINTQTLRIGNLYLPHGNPITS- 121
           ++ GVA+L K +PI I    P D+ + Q R I  T    N + + + N Y P G+ I   
Sbjct: 61  AHYGVAMLCKKEPISIQKGFPTDNDEHQKRMIMVTLEDDNGEKVTVLNGYFPQGDNIGHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175
           TK+  K  + K  + + +     +E LI  GD NI P               +      F
Sbjct: 121 TKFPYKRQFYKDLMTYLNDHHNNDEQLIVMGDINISPIDADIGIGEPNRKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E RQ  Q L + GF D  R  H   +  +S++DY +  +  N+G+RID ++ +P+  +
Sbjct: 181 QPEERQWLQTLLDWGFVDTFRQIHPDVNDRFSWFDYRSKGFPDNRGLRIDVVLATPKLAA 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
               A ID + RG  KPSDH P+  +  
Sbjct: 241 KCIEADIDYELRGIEKPSDHAPIWSTFK 268


>gi|62179894|ref|YP_216311.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|62127527|gb|AAX65230.1| exonuclease III, may repair singlet oxygen induced lesions
           [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|322714361|gb|EFZ05932.1| exonuclease III [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. A50]
          Length = 268

 Score =  202 bits (514), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 77/268 (28%), Positives = 120/268 (44%), Gaps = 8/268 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A +++  PD+I LQETK  D+ FP E +  L Y++   GQK
Sbjct: 1   MKFVSFNINGLRARPHQLEAIVEKRQPDVIGLQETKVHDEMFPLEEVAKLGYNVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122
            + GVA+L+K  PI +    P D  + Q R I A        + + N Y P G       
Sbjct: 61  GHYGVALLTKATPISVRRGFPDDGEEAQRRIIMAEIPSPLGNITVINGYFPQGESRDHPL 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  + +    +    L+   P++  GD NI P         +     +      F 
Sbjct: 121 KFPAKAQFYQNLQNYLETELKCNNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+   +L   G  D  R  +      +S++DY +  +  N+G+RID ++ S      
Sbjct: 181 PEEREWMSRLLKWGLVDTFRQANPQTMDKFSWFDYRSKGFVDNRGLRIDLLLASAPLAER 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                ID   R   KPSDH PV  +  +
Sbjct: 241 CAETGIDYDIRSMEKPSDHAPVWATFRV 268


>gi|28897777|ref|NP_797382.1| exonuclease III [Vibrio parahaemolyticus RIMD 2210633]
 gi|260363798|ref|ZP_05776553.1| exodeoxyribonuclease III [Vibrio parahaemolyticus K5030]
 gi|260876941|ref|ZP_05889296.1| exodeoxyribonuclease III [Vibrio parahaemolyticus AN-5034]
 gi|260897916|ref|ZP_05906412.1| exodeoxyribonuclease III [Vibrio parahaemolyticus Peru-466]
 gi|28805990|dbj|BAC59266.1| exodeoxyribonuclease III [Vibrio parahaemolyticus RIMD 2210633]
 gi|308085493|gb|EFO35188.1| exodeoxyribonuclease III [Vibrio parahaemolyticus Peru-466]
 gi|308093887|gb|EFO43582.1| exodeoxyribonuclease III [Vibrio parahaemolyticus AN-5034]
 gi|308113909|gb|EFO51449.1| exodeoxyribonuclease III [Vibrio parahaemolyticus K5030]
          Length = 268

 Score =  202 bits (514), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 79/268 (29%), Positives = 132/268 (49%), Gaps = 9/268 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V ++N+N +RAR+H L A I ++ PD+I LQE K  D+ FP E ++++ Y +   GQK
Sbjct: 1   MKVISFNINGLRARLHQLQALIDKHQPDVIGLQEIKVHDEAFPIEDVEAMGYKVYFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121
           ++ GVA+L K +PI +    P  ++   +   +      N + + + N Y P G+ I   
Sbjct: 61  AHYGVAMLCKQEPIRVQKGFPTDNEEHQKRMIMATFENENGEKVTVLNGYFPQGDNINHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175
           TK+  K  + K  + + +     +E LI  GD NI P               +      F
Sbjct: 121 TKFPYKRQFYKDLMTYLNDHHSNDEQLIVMGDINISPIDSDIGIGEPNRKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R+  + L + GF D  R  +   +  +S++DY +  +  N+G+RID I+ +P    
Sbjct: 181 QPEEREWLKTLLDWGFEDTFRKLYPEVNDRFSWFDYRSRGFDDNRGLRIDVILATPSLAQ 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
               + ID + RG  KPSDH P+  +  
Sbjct: 241 KCIESGIDYELRGIEKPSDHAPIWSTFK 268


>gi|160875927|ref|YP_001555243.1| exonuclease III [Shewanella baltica OS195]
 gi|160861449|gb|ABX49983.1| exodeoxyribonuclease III [Shewanella baltica OS195]
 gi|315268120|gb|ADT94973.1| exodeoxyribonuclease III [Shewanella baltica OS678]
          Length = 270

 Score =  202 bits (514), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 87/268 (32%), Positives = 131/268 (48%), Gaps = 9/268 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +RAR+H L A I  + PDII LQETK  D+ FP   ++++ Y +   G K
Sbjct: 1   MKIVSFNINGLRARLHQLQALIDSHQPDIIGLQETKVHDEAFPLAEVEAMGYQVHYHGGK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122
           ++ GVA+LSK  P ++    P DD D Q R I  TF   N + L + N Y P G  I   
Sbjct: 61  AHYGVAMLSKVAPEKLQKGFPTDDEDAQRRMIIGTFAQANGRPLTVFNGYFPQGESIDHP 120

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175
            KY  K  + +  + +       +E +   GD NI P   D           +      F
Sbjct: 121 TKYPAKRKFYQDLMHYLQTNHSNDEDIAIIGDINISPTDLDIGIGEVNRKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R+  + LQ+ G  D  R  H      YS++DY +  +  N+G+RID I+ +P   +
Sbjct: 181 QPEEREWLKTLQDWGLVDTFRQLHPERIERYSWFDYRSKGFDDNRGLRIDVILATPSLAA 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
            L  + +D   RG  KPSDH P+  +  
Sbjct: 241 RLVESDVDYDLRGIDKPSDHAPIWSTFK 268


>gi|240168902|ref|ZP_04747561.1| putative exodeoxyribonuclease III protein [Mycobacterium kansasii
           ATCC 12478]
          Length = 276

 Score =  202 bits (514), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 77/265 (29%), Positives = 122/265 (46%), Gaps = 7/265 (2%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
            + +ATWNVNSIR R+  +  WI   + D++ +QETK  D  FP   L  L Y +   G 
Sbjct: 5   TLRLATWNVNSIRTRLDRVLDWIARADVDVLAMQETKCADGQFPALPLFELGYEVAHVGF 64

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-----TQTLRIGNLYLPHGN 117
             +NGVAI S+    ++     G     +   + AT            +R+ +LY+P+G 
Sbjct: 65  DQWNGVAIASRVGIDDVQVGFDGQPTWSRKPEVAATAEARALGATCGGVRVWSLYVPNGR 124

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEE--PLIFAGDYNIIPQPHDCYNPIIWENDACF 175
            +    Y  K+ W+      A   L  +    +  AGD+NI P   D ++   +      
Sbjct: 125 ALGDPHYTYKLDWLAALKDTAEGWLRDDPAAAIALAGDWNIAPTDDDVWSTEFYAGATHV 184

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
           +   R++F  + +  F D +R       +Y++WDY    + K +G+RID I+ SP     
Sbjct: 185 SEPERKAFNAIVDAQFADLVRPFAPGPGVYTYWDYTQLRFPKRQGMRIDFILGSPALARR 244

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVS 260
           +  A+I  + R    PSDH PV V 
Sbjct: 245 VVDAQIVREERKGKAPSDHAPVFVD 269


>gi|323968517|gb|EGB63923.1| exodeoxyribonuclease III [Escherichia coli M863]
 gi|327252867|gb|EGE64521.1| exodeoxyribonuclease III [Escherichia coli STEC_7v]
          Length = 268

 Score =  202 bits (514), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 77/266 (28%), Positives = 121/266 (45%), Gaps = 8/266 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A ++++ PD+I LQETK  D  FP E +  L Y++   GQK
Sbjct: 1   MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            + GVA+L+K  PI +    P D  + Q R I A        + + N Y P G       
Sbjct: 61  GHYGVALLTKETPIAVRRGFPDDGEEAQRRIIMAEIPSPLGNVTVINGYFPQGESRDHPI 120

Query: 124 -YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
            +  K  + +    +    L+ E P++  GD NI P         +     +      F 
Sbjct: 121 KFPAKAQFYQNLQNYLETELKRENPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+   +L + G  D  R  +      +S++DY +  +  N+G+RID ++ S      
Sbjct: 181 PEEREWMDRLISWGLVDTFRHANPETADRFSWFDYRSKGFDDNRGLRIDLLLASQPLADC 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
                ID + R   KPSDH PV  + 
Sbjct: 241 CVETGIDYEIRSMEKPSDHAPVWATF 266


>gi|92113745|ref|YP_573673.1| exodeoxyribonuclease III [Chromohalobacter salexigens DSM 3043]
 gi|91796835|gb|ABE58974.1| Exodeoxyribonuclease III [Chromohalobacter salexigens DSM 3043]
          Length = 276

 Score =  202 bits (514), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 78/269 (28%), Positives = 129/269 (47%), Gaps = 11/269 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N IRAR+H L A +  + PD+I LQETK +D  FP E +++L YH+   GQK
Sbjct: 1   MRLVSFNINGIRARLHQLEALVDAHAPDVIGLQETKVQDSEFPREAVEALGYHVAFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTH-LPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
            + GVA+L++  P  +        +   +          + + L + N Y P G  +   
Sbjct: 61  GHYGVALLTRQAPEAVYYGLPDDGEEAQRRLIGVRLACDDGEPLTVYNGYFPQGENVDHP 120

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175
            K+ +K  +  R      +R    E L   GD+NI P   D           + E    F
Sbjct: 121 TKFPNKRDFYARLTTLLQERHTPSERLAVMGDFNISPADIDIGIGEANRKRWLREGKTSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKN--KGIRIDHIMLSPEA 232
               R+   +L + G +D  R  +      +S++DY +  + ++  +G+RID+IM++P  
Sbjct: 181 QPVEREWLARLVDWGLSDCYRLRYPEVDDRFSWFDYRSRGFERDPKRGLRIDYIMVTPAL 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
              +  A ID + RG  +PSDH PV   L
Sbjct: 241 CERVTDAGIDYELRGIQRPSDHAPVWAQL 269


>gi|107028675|ref|YP_625770.1| exodeoxyribonuclease III (xth) [Burkholderia cenocepacia AU 1054]
 gi|116690166|ref|YP_835789.1| exodeoxyribonuclease III Xth [Burkholderia cenocepacia HI2424]
 gi|105897839|gb|ABF80797.1| Exodeoxyribonuclease III [Burkholderia cenocepacia AU 1054]
 gi|116648255|gb|ABK08896.1| Exodeoxyribonuclease III [Burkholderia cenocepacia HI2424]
          Length = 258

 Score =  202 bits (514), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 84/256 (32%), Positives = 133/256 (51%), Gaps = 1/256 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+  R  ++  W+ ++  D++CLQE K  D+ FP   L+++ Y     GQK
Sbjct: 1   MKIATWNVNSLNVRKQHVLDWLAQSGTDVLCLQELKLPDEKFPRADLEAVGYRSWFTGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAIL +   + +       ++       +         +RI + Y P+G  + S K
Sbjct: 61  TYNGVAILVRDT-LAVDESDVVRNIPGFDDPQQRVIAATVDGVRIVSAYFPNGQALDSDK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W+     +    L+    L   GDYNI P+  D ++P  WE     + + R  F
Sbjct: 120 FVYKMQWLDALQAWLRTELQRYPKLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            +L  +GF DA R        +++WDY   ++ +N G+RIDHI+LSP   +   S  +D 
Sbjct: 180 AQLIELGFVDAFRRFEQPEKTFTWWDYRMMAFRRNAGLRIDHILLSPALAATCASCEVDR 239

Query: 244 KPRGWTKPSDHTPVIV 259
            PR W +PSDHTPV+ 
Sbjct: 240 VPRTWEQPSDHTPVVA 255


>gi|254670248|emb|CBA05478.1| exodeoxyribonuclease III [Neisseria meningitidis alpha153]
          Length = 256

 Score =  202 bits (514), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 90/260 (34%), Positives = 134/260 (51%), Gaps = 4/260 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + TWNVNS+  R+  +   + +N PDI+ LQE K +   FP   LQ + +H    GQK
Sbjct: 1   MKITTWNVNSLNVRLPQVQNLLADNPPDILVLQELKLDQDKFPAAALQMMGWHCVWSGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAI+S+  P ++   LP    D Q R I AT       +R+ N+Y  +G  + S K
Sbjct: 61  TYNGVAIVSRNAPEDVHIGLPALPDDPQRRVIAATVGG----VRVINVYCVNGEALDSPK 116

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K  W      F    +     L+  GD+NI P   DCY+P  W      +   RQ F
Sbjct: 117 FKYKEQWFAALTEFVRDEMTRYGKLVLLGDFNIAPADADCYDPEKWHEKIHCSSVERQWF 176

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + L ++G TD++R  H     Y+++DY    + +  G+RIDHI++SP   + L   R+D 
Sbjct: 177 KNLLDLGLTDSLRQVHPEGAFYTWFDYRGAMFQRKLGLRIDHILVSPAMAAALKDVRVDL 236

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
           + R   +PSDH PV    D 
Sbjct: 237 ETRALERPSDHAPVAAEFDW 256


>gi|117919951|ref|YP_869143.1| exonuclease III [Shewanella sp. ANA-3]
 gi|117612283|gb|ABK47737.1| Exodeoxyribonuclease III [Shewanella sp. ANA-3]
          Length = 270

 Score =  202 bits (514), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 85/268 (31%), Positives = 130/268 (48%), Gaps = 9/268 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +R+R+H L A I  + PDII LQETK  D+ FP   ++++ YH+   G K
Sbjct: 1   MKIVSFNINGLRSRLHQLQALIDSHQPDIIGLQETKVHDEAFPLAEVEAMGYHVHYHGGK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122
           ++ GVA+LSK  P+++      D+ D Q R I  TF   N   L + N Y P G  I   
Sbjct: 61  AHYGVAMLSKVAPLKVQKGFATDEEDAQRRMIIGTFAQANGHPLTVLNGYFPQGESIDHP 120

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175
            KY  K  + +  +         +E +   GD NI P   D           +      F
Sbjct: 121 TKYPAKRKFYQDLMAHLHANHSNDEDIAIIGDINISPIDLDIGIGEVNRKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R+  + LQ  G  D  R  H      YS++DY +  +  N+G+RID I+ +P   +
Sbjct: 181 QPEEREWLKTLQGWGLVDTFRQLHPDRCERYSWFDYRSKGFDDNRGLRIDVILATPSLAA 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
            L  + +D + RG  KPSDH P+  +  
Sbjct: 241 RLVESDVDYELRGIDKPSDHAPIWSTFK 268


>gi|123965783|ref|YP_001010864.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9515]
 gi|123200149|gb|ABM71757.1| exodeoxyribonuclease III [Prochlorococcus marinus str. MIT 9515]
          Length = 281

 Score =  202 bits (514), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 93/269 (34%), Positives = 148/269 (55%), Gaps = 4/269 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+R R+  +  WIK  NPDI+CLQETK  D +FP    + L Y +   GQK
Sbjct: 1   MLIATWNVNSVRTRLSQIINWIKNVNPDILCLQETKVIDNSFPLTPFEELGYEVTVHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT----INTQTLRIGNLYLPHGNPI 119
           SYNGVAI+SK++   I+     ++ +                +   L+I N+Y+P+G+ +
Sbjct: 61  SYNGVAIISKFKIENIIKGFTNENEEKSNFLNFNEQKRLISADINGLKIINVYVPNGSSL 120

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
            S K+D KI W+     F  +++  ++ + F GD+NI P   D + P  +E     +   
Sbjct: 121 DSDKFDYKIKWLNHLSSFLDKQVREDDLVCFVGDFNIAPFDIDIHCPQKYEGGIMASKIE 180

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R++ +K+    F D+ R        +S+WDY  +++  NKG RIDHI +S   +S L S 
Sbjct: 181 REALKKVIKGRFIDSFRIFEKNTGHWSWWDYRNNAYELNKGWRIDHIYISNNLSSQLKSC 240

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268
            I+   R  ++PSDH PV+++L+I    +
Sbjct: 241 VIERSQRENSQPSDHAPVLINLEIDNQSE 269


>gi|296128411|ref|YP_003635661.1| exodeoxyribonuclease III Xth [Cellulomonas flavigena DSM 20109]
 gi|296020226|gb|ADG73462.1| exodeoxyribonuclease III Xth [Cellulomonas flavigena DSM 20109]
          Length = 264

 Score =  202 bits (514), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 81/261 (31%), Positives = 131/261 (50%), Gaps = 3/261 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+NSIRAR+    A+++    D++ LQETK +D+ FP E  ++L Y + T G  
Sbjct: 1   MLLATWNINSIRARVDRAVAFLERTGVDVLALQETKVKDEAFPREPFEALGYEVATHGYS 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT-LRIGNLYLPHGNPITST 122
            +NGVAI+S+    ++    PG          EA     T   +R+ +LY+P+G  I   
Sbjct: 61  QWNGVAIVSRVGLTDVERGFPGQPTWGDPGVAEARALGATCGGVRVWSLYVPNGREIEDP 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIF--AGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
            Y  K+ W+      A   L  +        GD+NI P   D ++   +      T   R
Sbjct: 121 HYTYKLDWLGALRDAAEGWLTADPRAQVALVGDWNIAPLDTDVWDIARFAGRTHVTPAER 180

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           Q+F+ L + G+++  R      H Y++WDY    + +N+G+RID    SP   + +   R
Sbjct: 181 QAFEALAHAGYSEVSRVHVPAEHTYTYWDYQQLRFPRNEGMRIDLTYASPTLAARVTGVR 240

Query: 241 IDTKPRGWTKPSDHTPVIVSL 261
           I+   R   +PSDH PV++ +
Sbjct: 241 IERDERKGKQPSDHVPVVLEI 261


>gi|170721841|ref|YP_001749529.1| exodeoxyribonuclease III Xth [Pseudomonas putida W619]
 gi|169759844|gb|ACA73160.1| exodeoxyribonuclease III Xth [Pseudomonas putida W619]
          Length = 260

 Score =  202 bits (514), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 104/262 (39%), Positives = 154/262 (58%), Gaps = 5/262 (1%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           M  + +AT+N+N I +R+  L AW++   PD+ CLQE K  D  FP E +++  Y     
Sbjct: 1   MKPLRIATFNINGIGSRLPALLAWLEREKPDVACLQELKAADTKFPREAIEAAGYGCLYM 60

Query: 61  GQKSYNGVAILSKY-QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
           GQ S+NGVAIL++  QP+E+   LPG + D Q+R++EA        + +G LYLP+GNP 
Sbjct: 61  GQPSWNGVAILARDSQPLEVRRGLPGMEDDSQSRYLEAAVQG----VLVGCLYLPNGNPQ 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K++ K+ W +  ++ A   L    P + AGD+N++P   D YNP  W  DA    E 
Sbjct: 117 PGPKFEYKLRWFECLVKHAHDLLGSGHPTVLAGDFNVVPTDFDIYNPKSWLKDALLQPES 176

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R  +Q L   G+TDAIR  +    +Y+FWDY+ + W++N G+RIDH++LSP+  S L + 
Sbjct: 177 RNCYQALLEQGWTDAIRQLYPDERIYTFWDYFRNHWARNAGLRIDHLLLSPDIASHLKAG 236

Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261
            +D   R   KPSDH P  + L
Sbjct: 237 GVDAWVRNEPKPSDHAPAWIEL 258


>gi|16331188|ref|NP_441916.1| exodeoxyribonuclease III [Synechocystis sp. PCC 6803]
 gi|1653682|dbj|BAA18594.1| exodeoxyribonuclease III [Synechocystis sp. PCC 6803]
          Length = 275

 Score =  202 bits (514), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 91/264 (34%), Positives = 138/264 (52%), Gaps = 5/264 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A+WNVNS+R+R  ++  W+  N  D++CLQETK  D++FP +  +   YH    GQK
Sbjct: 11  MDIASWNVNSVRSRQQHILDWLGTNPVDVLCLQETKVVDEDFPRQPFEEAGYHCHISGQK 70

Query: 64  SYNGVAILSKYQPIEIVTHL---PGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           SYNGVAI S+    ++           L       +   +     +RI NLY+P+G+ + 
Sbjct: 71  SYNGVAIFSREPLQDVKIGFAALVEPALTGDLDEQKRVISGVYDGVRIVNLYVPNGSALD 130

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLI-FAGDYNIIPQPHDCYNPIIWENDACFT-LE 178
           S KY  K+ W+     +  Q    + P     GD+NI P+  D ++P+  EN    T +E
Sbjct: 131 SEKYLYKLRWLNLLQTYLEQLRRSDTPEFLVCGDFNIAPEDRDIHDPVGRENHIMATAME 190

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
                + L      DA R   +    YS+WDY    +S+N+G RIDH  L+P+       
Sbjct: 191 REALTEVLAIANLQDAFRKFTEETGHYSWWDYRTRGFSRNRGWRIDHHYLTPQLYDQAQK 250

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
             ID +PRGW KPSDH PV+V+++
Sbjct: 251 CWIDREPRGWEKPSDHAPVVVTIN 274


>gi|325527267|gb|EGD04639.1| exodeoxyribonuclease III [Burkholderia sp. TJI49]
          Length = 258

 Score =  202 bits (514), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 82/256 (32%), Positives = 129/256 (50%), Gaps = 1/256 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+  R  ++  W+ ++  D++CLQE K  D+ FP   L+++ Y     GQK
Sbjct: 1   MKIATWNVNSLNVRKQHVLDWLAQSGTDVLCLQELKLPDEKFPRADLEAIGYRSWFTGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAIL++       + +  +                   +R  + Y P+G    S K
Sbjct: 61  TYNGVAILARDTLPFDESDIVRNIPGFDDPQQRVVAVTIDG-VRFVSAYFPNGQAPDSDK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W+     +    ++    L   GDYNI P+  D ++P  WE     + + R  F
Sbjct: 120 FVYKMQWLDALQAWLRAEMQRYPKLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            +L  +GF DA R        +++WDY   ++ +N G+RIDHI+LSP       S  +D 
Sbjct: 180 AQLIELGFVDAFRRFEQPEKTFTWWDYRMFAFRRNAGLRIDHILLSPALADTCTSCVVDR 239

Query: 244 KPRGWTKPSDHTPVIV 259
            PR W +PSDHTPV+ 
Sbjct: 240 TPRTWEQPSDHTPVVA 255


>gi|304391804|ref|ZP_07373746.1| exodeoxyribonuclease III [Ahrensia sp. R2A130]
 gi|303296033|gb|EFL90391.1| exodeoxyribonuclease III [Ahrensia sp. R2A130]
          Length = 265

 Score =  202 bits (513), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 122/262 (46%), Positives = 179/262 (68%), Gaps = 5/262 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A+WN+N I+AR   L  W+K+  PDI+ LQE K+ D+NFP   +++L Y+++T GQK
Sbjct: 1   MKIASWNINGIKARHDVLIEWLKQAEPDIVGLQEIKSVDENFPASEIEALGYNVQTHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTH----LPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            +NGVA+LS+    E+          +D D QARFIE  F+I  ++LR+ +LYLP+GNP+
Sbjct: 61  GFNGVALLSRLPFDEVNRGLPLLRESEDEDEQARFIEGVFSIEGKSLRVVSLYLPNGNPV 120

Query: 120 TSTK-YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
              + +D K+ W+ R   +A+ RL LEEPLI AGDYN+IPQP+DC+NP +WE DA F  E
Sbjct: 121 DDPRKFDYKLRWMDRLHAWAADRLALEEPLILAGDYNVIPQPNDCWNPKVWEGDALFRDE 180

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
            R  F+ L+N+GFT+A+R++ +   +Y+FWDY A +W KN GIRIDH+++S EA  + + 
Sbjct: 181 TRSRFEALKNLGFTEALRSSANADGIYTFWDYQAGAWPKNHGIRIDHLLMSAEAADMFNG 240

Query: 239 ARIDTKPRGWTKPSDHTPVIVS 260
             ID+  R W KPSDH P+ + 
Sbjct: 241 CGIDSFVRDWEKPSDHVPIWLE 262


>gi|325272311|ref|ZP_08138717.1| exonuclease III [Pseudomonas sp. TJI-51]
 gi|324102557|gb|EGB99997.1| exonuclease III [Pseudomonas sp. TJI-51]
          Length = 270

 Score =  202 bits (513), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 86/269 (31%), Positives = 134/269 (49%), Gaps = 11/269 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +  +N+N +RAR H LAA I+++ PD+I LQETK  D+ FP   +Q+L YH+   GQK
Sbjct: 1   MKIVCFNINGLRARPHQLAALIEKHQPDVIGLQETKVSDEQFPLADVQALGYHVHYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122
            + GVA+LS+  P+ +     GD+ D Q RFI  TF       + I N Y P G      
Sbjct: 61  GHYGVALLSRQAPLSLHKGFAGDEEDAQRRFIWGTFADAQGNPITIMNGYFPQGESRDHP 120

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175
            K+  K  +          +   ++P++  GD NI PQ        D     +      F
Sbjct: 121 TKFPAKQRFYSDLQVLLESQFRNDQPVLVMGDMNISPQDCDIGIGPDNAKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232
             E R+  ++L+  G  D+ R  +   +  +S++DY +  +     +G+RID IM S   
Sbjct: 181 LPEEREWMERLKGWGLVDSFRHLYPDVNDRFSWFDYRSRGFEDEPKRGLRIDLIMASHAL 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
              + +A +D + RG  KPSDH P+ + L
Sbjct: 241 VPRIKAAGVDYELRGMEKPSDHAPIWLEL 269


>gi|148242745|ref|YP_001227902.1| exodeoxyribonuclease III [Synechococcus sp. RCC307]
 gi|147851055|emb|CAK28549.1| Exodeoxyribonuclease III [Synechococcus sp. RCC307]
          Length = 275

 Score =  202 bits (513), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 90/262 (34%), Positives = 136/262 (51%), Gaps = 4/262 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSIR+R  +L  W+++  PD++ LQETK ED  FP   ++   Y     GQK
Sbjct: 1   MRIATWNVNSIRSRQSHLLRWLEQAKPDVLGLQETKVEDAQFPAAAMEEAGYRTVISGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHL----PGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
           SYNGVA+LS+    E+        PGD+  ++    +   +     +R+ NLY+P+G+ +
Sbjct: 61  SYNGVALLSREPLEEVRIGFDALLPGDEAAIELSQQKRVISAWVDGVRVLNLYVPNGSEV 120

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
            S KY  K++W+    R+   + E  EP    GD+NI P+  D +NP         +   
Sbjct: 121 GSEKYAYKLAWLDCLRRYLDVQREQGEPFCMLGDFNIGPEARDLHNPERSTGGIMASDAE 180

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R++ +        DA R        +S+WDY + +W+ ++G RIDH+ L  E      + 
Sbjct: 181 REALKACLGDDLRDAFRMFEQGSGHWSWWDYRSGAWNGDRGWRIDHLYLDEELQQRALAC 240

Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261
            I    RG  KPSDH PV V L
Sbjct: 241 EIHKSERGLEKPSDHAPVSVDL 262


>gi|269960966|ref|ZP_06175335.1| exodeoxyribonuclease III [Vibrio harveyi 1DA3]
 gi|269834185|gb|EEZ88275.1| exodeoxyribonuclease III [Vibrio harveyi 1DA3]
          Length = 268

 Score =  202 bits (513), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 82/268 (30%), Positives = 131/268 (48%), Gaps = 9/268 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V ++N+N +RAR+H L A I ++ PD+I LQE K  D+ FP E ++++ Y +   GQK
Sbjct: 1   MKVISFNINGLRARLHQLQALIDKHQPDVIGLQEIKVHDEAFPIEDVEAMGYKVYFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121
           ++ GVA+L K +PI +    P  ++   +   +      N + + + N Y P G+ I   
Sbjct: 61  AHYGVAMLCKQEPISVQKGFPTDNEEHQKRMIMATFEDENEEKVTVLNGYFPQGDNIAHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175
           TKY  K  + K  + + +     +E LI  GD NI P               +      F
Sbjct: 121 TKYPYKRQFYKDLMTYLNNHHSNDEQLIVMGDINISPIDADIGIGEPNRKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R+  Q L + GF D  R  H      +S++DY +  +  N+G+RID I+ +P    
Sbjct: 181 QPEEREWLQTLLDWGFEDTFRNLHPEVDDRFSWFDYRSRGFDDNRGLRIDVILATPSLAK 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
               + ID + RG  KPSDH P+  +  
Sbjct: 241 KCIESDIDYELRGIEKPSDHAPIWSTFK 268


>gi|66045712|ref|YP_235553.1| exonuclease III [Pseudomonas syringae pv. syringae B728a]
 gi|63256419|gb|AAY37515.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Pseudomonas
           syringae pv. syringae B728a]
 gi|330971266|gb|EGH71332.1| exonuclease III [Pseudomonas syringae pv. aceris str. M302273PT]
          Length = 270

 Score =  202 bits (513), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 88/269 (32%), Positives = 133/269 (49%), Gaps = 11/269 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +RAR H LAA I ++ PD+I LQETK  D+ FP   +++L YH+   GQK
Sbjct: 1   MKIISFNINGLRARPHQLAALIDKHQPDVIGLQETKVSDEQFPQAEVEALGYHVHFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122
            + GVA+LS+  P+ +     GDD + Q RFI  T+   N Q + I N Y P G      
Sbjct: 61  GHYGVALLSRNAPLALHKGFEGDDEESQKRFIWGTYADSNGQPVTIMNGYFPQGESRDHP 120

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175
            K+  K  + +            ++PLI  GD NI PQ        D     +      F
Sbjct: 121 TKFPAKQRFYENLQTLLEGHFRNDQPLIVMGDVNISPQDCDIGIGADNAKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232
             E R+  ++L+N G  D+ R  +      +S++DY +  +     +G+RID IM S   
Sbjct: 181 LPEEREWMERLKNWGLVDSFRHLYPEVVDRFSWFDYRSRGFEDEPKRGLRIDLIMTSTGL 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
              +  A +D   R   KPSDH P+ + L
Sbjct: 241 QPRIKEAGVDYDLRAMEKPSDHAPIWLEL 269


>gi|289673873|ref|ZP_06494763.1| exonuclease III [Pseudomonas syringae pv. syringae FF5]
          Length = 270

 Score =  202 bits (513), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 88/269 (32%), Positives = 134/269 (49%), Gaps = 11/269 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +RAR H LAA I ++ PD+I LQETK  D+ FP   +++L YH+   GQK
Sbjct: 1   MKIVSFNINGLRARPHQLAALIDKHQPDVIGLQETKVSDEQFPQAEVEALGYHVHFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122
            + GVA+LS+  P+ +     GDD + Q RFI  T+   N Q + I N Y P G      
Sbjct: 61  GHYGVALLSRNAPLALHKGFEGDDEESQKRFIWGTYADSNGQPVTIMNGYFPQGESRDHP 120

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175
            K+  K  + +        +   ++PLI  GD NI PQ        D     +      F
Sbjct: 121 TKFPAKQRFYENLQTLLEGQFRNDQPLIVMGDVNISPQDCDIGIGADNAKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232
             E R+  ++L+N G  D+ R  +      +S++DY +  +     +G+RID IM S   
Sbjct: 181 LPEEREWMERLKNWGLVDSFRHLYPEVVDRFSWFDYRSRGFEDEPKRGLRIDLIMTSTGL 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
              +  A +D   R   KPSDH P+ + L
Sbjct: 241 QPRIKEAGVDYDLRAMEKPSDHAPIWLEL 269


>gi|209548989|ref|YP_002280906.1| exodeoxyribonuclease III Xth [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209534745|gb|ACI54680.1| exodeoxyribonuclease III Xth [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 263

 Score =  202 bits (513), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 115/264 (43%), Positives = 163/264 (61%), Gaps = 5/264 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+NVN I  R+  L  W+KE+ PD++CLQE KT+D  FP + ++   Y     GQ+
Sbjct: 1   MKIATYNVNGINGRLAILLRWLKEDAPDVVCLQELKTDDAGFPRKEIERSGYGAVWHGQR 60

Query: 64  SYNGVAILSKYQ-PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           S+NGVAIL+K + PI     LPGD  D  +R+IEA        + IG LYLP+GNP    
Sbjct: 61  SWNGVAILAKDKTPILTRRGLPGDPDDSHSRYIEAVIDG----IVIGCLYLPNGNPFPGA 116

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           K+D K+ W +R   +A++ L LE P I AGD+N++P   D Y P  W +DA F  EVR++
Sbjct: 117 KFDYKLRWFRRLHDYAAELLALEVPSILAGDFNVMPTEIDVYKPERWLDDALFRPEVRKA 176

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           +  L   G+TDA+R  H    +Y+FW Y+ +S+ ++ G+RIDH +LSP     L SA + 
Sbjct: 177 YAHLVGQGWTDAVRHLHPHERIYTFWKYWRNSFERDAGLRIDHFLLSPAVAPWLRSATVR 236

Query: 243 TKPRGWTKPSDHTPVIVSLDIPEP 266
            KPRGW   SDH PV++ LD+P  
Sbjct: 237 RKPRGWEHTSDHAPVMIELDVPSV 260


>gi|49475800|ref|YP_033841.1| exodeoxyribonuclease III [Bartonella henselae str. Houston-1]
 gi|49238607|emb|CAF27848.1| Exodeoxyribonuclease III [Bartonella henselae str. Houston-1]
          Length = 260

 Score =  202 bits (513), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 132/259 (50%), Positives = 178/259 (68%), Gaps = 1/259 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + TWN+  I+AR   L  W+++N PDI+CLQE K+ D+NFP + ++SL YHIET GQK
Sbjct: 1   MKIVTWNIAGIKARHETLYQWLQQNRPDIVCLQEIKSTDENFPRDAIESLGYHIETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           S+NGVAILSK  P E++  LPG+D D Q R+IEA ++ N   +R+ +LYLP+GNPI S K
Sbjct: 61  SFNGVAILSKKTPDEVIRQLPGNDKDEQTRYIEAVYSTNKGVIRVASLYLPNGNPINSEK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W++R    A   L+ EEPL+ AGDYN+IP P D   P  W +DA F  + RQ+F
Sbjct: 121 YPYKMEWMERLYTHAKSLLKYEEPLVLAGDYNVIPTPLDAKTPKEWSDDALFLPQTRQAF 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q++ ++GF DAIR   DT   +SFWD+ A +W KN GIRIDH++LSPEA   L  A    
Sbjct: 181 QRIIHLGFYDAIRNVTDTP-SFSFWDFQAAAWRKNNGIRIDHLLLSPEAVDQLICAYSQK 239

Query: 244 KPRGWTKPSDHTPVIVSLD 262
           + RG+ KPSDHTPV + L+
Sbjct: 240 EVRGYQKPSDHTPVWIDLN 258


>gi|167586711|ref|ZP_02379099.1| Exodeoxyribonuclease III xth [Burkholderia ubonensis Bu]
          Length = 258

 Score =  202 bits (513), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 84/256 (32%), Positives = 126/256 (49%), Gaps = 1/256 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+  R  ++  W+ ++  D++CLQE K  D  FP   L++  Y     GQK
Sbjct: 1   MKIATWNVNSLNVRKQHVLDWLAQSGTDVLCLQELKLPDDKFPRADLEAAGYRSWFTGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAIL++       + +  +                  T RI + Y P+G    S K
Sbjct: 61  TYNGVAILARDTLPFDESDVTRNVPGFDDPQQRVIAVTIDGT-RIISAYFPNGQAPDSDK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W+     +    L+    L   GDYNI P+  D ++P  WE     + + R  F
Sbjct: 120 FVYKMQWLDALNAWLRSELQRYPKLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             L  +G  DA R        +++WDY   ++ +N G+RIDHI+LSP       S  +D 
Sbjct: 180 AGLLELGLVDAFRRFEQPEKTFTWWDYRMMAFRRNAGLRIDHILLSPALAETCTSCVVDR 239

Query: 244 KPRGWTKPSDHTPVIV 259
            PR W +PSDHTPV+ 
Sbjct: 240 TPRTWEQPSDHTPVVA 255


>gi|153213065|ref|ZP_01948603.1| exodeoxyribonuclease III [Vibrio cholerae 1587]
 gi|124116112|gb|EAY34932.1| exodeoxyribonuclease III [Vibrio cholerae 1587]
          Length = 268

 Score =  202 bits (513), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 80/268 (29%), Positives = 128/268 (47%), Gaps = 9/268 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V ++N+N +RAR+H L A I ++ PD+I LQE K  D+ FP + ++++ Y +   GQK
Sbjct: 1   MKVISFNINGLRARLHQLQALIDKHQPDVIGLQEIKVHDEAFPRQEVEAMGYQVYFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDL-DVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121
           ++ GVAIL K  P+E++   P D+    +   +      N Q   I N Y P G+ +   
Sbjct: 61  AHYGVAILCKQTPVEVIKGFPTDNAEHQKRMIMATFADQNGQKTTILNGYFPQGDNVEHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175
           TK+  K  + +  + +  +     E L+  GD NI P               +      F
Sbjct: 121 TKFPYKRQFYRDLMTYLREHRSNSERLVVMGDINISPLDLDIGIGEANRKRWLQTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R+  Q L + G  D  R  H      +S++DY +  +  N+G+RID I+ +P    
Sbjct: 181 QPEEREWLQTLLDWGLVDTFRQLHPDVSDQFSWFDYRSRGFEDNRGLRIDVILATPTLAE 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
               A ID + R   KPSDH P+  +  
Sbjct: 241 TCQEAGIDYELRAIDKPSDHAPIWATFK 268


>gi|261378301|ref|ZP_05982874.1| exodeoxyribonuclease III [Neisseria cinerea ATCC 14685]
 gi|269145396|gb|EEZ71814.1| exodeoxyribonuclease III [Neisseria cinerea ATCC 14685]
          Length = 256

 Score =  202 bits (513), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 89/260 (34%), Positives = 136/260 (52%), Gaps = 4/260 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + TWNVNS+  R+  +   + +N+PD++ LQE K +   FP   LQ + +H    GQK
Sbjct: 1   MKITTWNVNSLNVRLPQVQNLLADNSPDVLVLQELKLDQDKFPAAALQMMGWHCVWSGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAI+S+  P ++   LP    D Q R I AT       +R+ N+Y  +G  + S K
Sbjct: 61  TYNGVAIISRSVPQDVHFGLPSLPDDPQRRVIAATVGG----VRVINVYCVNGEALDSPK 116

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K  W      F    +     L+  GD+NI P   DCY+P  W      +   RQ F
Sbjct: 117 FKYKEQWFAALTEFVRDEMTRHGKLVLLGDFNIAPADADCYDPEKWHEKIHCSSIERQWF 176

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q L ++G TD++R  H     Y+++DY    + +  G+RIDHI+++ E  ++L   R+D 
Sbjct: 177 QNLLDLGLTDSLRHIHPEGAFYTWFDYRGAMFQRKLGLRIDHILVTSEMAAVLKDVRVDL 236

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
             R   +PSDH PV    D+
Sbjct: 237 DTRALERPSDHAPVAAEFDL 256


>gi|301156424|emb|CBW15895.1| exonuclease III [Haemophilus parainfluenzae T3T1]
          Length = 267

 Score =  202 bits (513), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 81/267 (30%), Positives = 128/267 (47%), Gaps = 8/267 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A I++  PD+I LQE K  D++FP+   ++L YH+   GQK
Sbjct: 1   MKFISFNINGLRARPHQLEAIIEKYQPDVIGLQEIKVADEDFPYTITENLGYHVFHHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122
            + GVA+L+K +P  +    P D+ D Q R I A        L + N Y P G      T
Sbjct: 61  GHYGVALLTKQEPKAVRRGFPTDNEDAQKRIIMADLETPFGLLTVINGYFPQGESRAHET 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  +     R+  Q  +   P++  GD NI P         +     +      F 
Sbjct: 121 KFPAKEKFYADLQRYLEQDHDKANPVLIMGDMNISPSDLDIGIGDENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+ +Q+L + G  D  R  + T +  +S++DY +  +  N+G+RIDHI+++ +    
Sbjct: 181 PEEREWYQRLYDYGLEDTFRKLNPTVNDKFSWFDYRSKGFDDNRGLRIDHILVNRQLAER 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262
                I    R   KPSDH P+     
Sbjct: 241 CVDVGIALDIRAMEKPSDHAPIWAEFK 267


>gi|28198769|ref|NP_779083.1| exodeoxyribonuclease III [Xylella fastidiosa Temecula1]
 gi|28056860|gb|AAO28732.1| exodeoxyribonuclease III [Xylella fastidiosa Temecula1]
          Length = 262

 Score =  202 bits (513), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 86/261 (32%), Positives = 136/261 (52%), Gaps = 6/261 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A+WNVNS+  R+  L  W+ E  PD++ LQETK ED  FP   L +L Y     GQK
Sbjct: 1   MRIASWNVNSLNVRLSQLQQWLVEAAPDVLGLQETKLEDHQFPEAALAALGYVSVYAGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVA+L++    ++   +P                     +R+ NLY+ +G  + + K
Sbjct: 61  TYNGVALLARVALEDVQVGIP-----EFEDVQRRVIAATVDGIRVVNLYVVNGQEVGTDK 115

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+SW+     + ++ L+    L+  GD+NI P   D Y+P +W  D   T    ++ 
Sbjct: 116 YAYKLSWLDAVYHWLAEELQRYPRLVVLGDFNIAPDARDVYDPQVWNEDHILTSTTERAA 175

Query: 184 -QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
             KL  +G  D  R  H    ++S+WDY   S+ +N+G+RID  ++S    +   ++ ID
Sbjct: 176 LDKLLGLGLHDGFRLHHQDAGIFSWWDYRQASFRRNRGLRIDLTLVSEALRAQAVASGID 235

Query: 243 TKPRGWTKPSDHTPVIVSLDI 263
             PRGW +PSDH P  + L +
Sbjct: 236 RVPRGWERPSDHAPAWIELAL 256


>gi|126174923|ref|YP_001051072.1| exonuclease III [Shewanella baltica OS155]
 gi|153001253|ref|YP_001366934.1| exonuclease III [Shewanella baltica OS185]
 gi|217972826|ref|YP_002357577.1| exonuclease III [Shewanella baltica OS223]
 gi|125998128|gb|ABN62203.1| Exodeoxyribonuclease III [Shewanella baltica OS155]
 gi|151365871|gb|ABS08871.1| exodeoxyribonuclease III [Shewanella baltica OS185]
 gi|217497961|gb|ACK46154.1| exodeoxyribonuclease III [Shewanella baltica OS223]
          Length = 270

 Score =  202 bits (513), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 87/268 (32%), Positives = 131/268 (48%), Gaps = 9/268 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +RAR+H L A I  + PDII LQETK  D+ FP   ++++ Y +   G K
Sbjct: 1   MKIVSFNINGLRARLHQLQALIDSHQPDIIGLQETKVHDEAFPLADVEAMGYQVHYHGGK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122
           ++ GVA+LSK  P ++    P DD D Q R I  TF   N + L + N Y P G  I   
Sbjct: 61  AHYGVAMLSKVAPEKLQKGFPTDDEDAQRRMIIGTFAQANGRPLTVFNGYFPQGESIDHP 120

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175
            KY  K  + +  + +       +E +   GD NI P   D           +      F
Sbjct: 121 TKYPAKRKFYQDLMHYLQTNHSNDEDIAIIGDINISPTDLDIGIGEVNRKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R+  + LQ+ G  D  R  H      YS++DY +  +  N+G+RID I+ +P   +
Sbjct: 181 QPEEREWLKTLQDWGLVDTFRQLHPERIERYSWFDYRSKGFDDNRGLRIDVILATPSLAA 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
            L  + +D   RG  KPSDH P+  +  
Sbjct: 241 RLVESDVDYDLRGIDKPSDHAPIWSTFK 268


>gi|328473247|gb|EGF44095.1| exonuclease III [Vibrio parahaemolyticus 10329]
          Length = 268

 Score =  202 bits (513), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 79/268 (29%), Positives = 133/268 (49%), Gaps = 9/268 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V ++N+N +RAR+H L A I ++ PD+I LQE K  D+ FP E ++++ Y +   GQK
Sbjct: 1   MKVISFNINGLRARLHQLQALIDKHQPDVIGLQEIKVHDEAFPIEDVEAMGYKVYFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121
           ++ GVA+L K +PI +    P  ++   +   +      N + + + N Y P G+ I+  
Sbjct: 61  AHYGVAMLCKQEPIRVQKGFPTDNEEHQKRMIMVTFEDENGEKVTVLNGYFPQGDNISHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175
           TK+  K  + K  + + +     +E LI  GD NI P               +      F
Sbjct: 121 TKFPYKRQFYKDLMTYLNDHHSNDEQLIVMGDINISPIDSDIGIGEPNRKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R+  + L + GF D  R  +   +  +S++DY +  +  N+G+RID I+ +P    
Sbjct: 181 QPEEREWLKTLLDWGFEDTFRKLYPEVNDRFSWFDYRSRGFDDNRGLRIDVILATPSLAQ 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
               + ID + RG  KPSDH P+  +  
Sbjct: 241 KCIESGIDYELRGIEKPSDHAPIWSTFK 268


>gi|319404431|emb|CBI78034.1| exodeoxyribonuclease III [Bartonella rochalimae ATCC BAA-1498]
          Length = 260

 Score =  202 bits (513), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 136/259 (52%), Positives = 182/259 (70%), Gaps = 1/259 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+  I+AR   L  W+K+N PD++CLQE K+ D+NFP +T+++L YHIET GQK
Sbjct: 1   MKIATWNIAGIKARHETLCKWLKQNQPDVVCLQEIKSVDENFPRDTIENLGYHIETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           S+NGVAILSK  P E++  LPG++ D+QAR+IE  ++ NT ++R+ +LYLP+GNPI S K
Sbjct: 61  SFNGVAILSKTVPDEVILQLPGNNNDMQARYIETVYSTNTGSIRVASLYLPNGNPINSEK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  KI W+KR    A   L  EEPLI AGDYN+IP P D  NP  W NDA F  ++RQ F
Sbjct: 121 YLYKIEWMKRLYTHAKSLLAYEEPLILAGDYNVIPTPLDAKNPQEWSNDALFLPQIRQIF 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q + ++GF DAIR   D    +SFWD+ A++W KN GIRIDH++LSPEA   L  A   T
Sbjct: 181 QCITHLGFYDAIRNVTDAP-SFSFWDFQANAWKKNNGIRIDHLLLSPEAADQLICAYSQT 239

Query: 244 KPRGWTKPSDHTPVIVSLD 262
           + RG+ KPSDH P+ + L+
Sbjct: 240 EARGYQKPSDHVPIWIELN 258


>gi|91763300|ref|ZP_01265264.1| exodeoxyribonuclease III [Candidatus Pelagibacter ubique HTCC1002]
 gi|91717713|gb|EAS84364.1| exodeoxyribonuclease III [Candidatus Pelagibacter ubique HTCC1002]
          Length = 258

 Score =  202 bits (513), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 95/258 (36%), Positives = 157/258 (60%), Gaps = 1/258 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + +WNVNS+RARI N+  ++++ +P+++ +QE KT+D+ FP++   +L+Y     GQK
Sbjct: 1   MIITSWNVNSVRARIENIKEYLQKFSPNVVMMQEIKTQDETFPYDDFSALDYESHVFGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           SYNGVAI+SK++   +   L  D L               + +++ N+Y P+GNP+ + K
Sbjct: 61  SYNGVAIISKHKLENVRIDLIKDKLKQSRIISA-ELKHKKKNVQLINIYTPNGNPVDTDK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K  W+ + ++      +  E +I AGD+NI+P   D YN   +E+DA + LE+R+ F
Sbjct: 120 YTYKKDWLDKLIKQLKTLSKKNENIILAGDFNILPSAEDAYNIKGFEDDALYRLEIRKKF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           +++ N+GF DA R  H     Y++WDY   +W KN G+RIDH ++S    +++ +  I+ 
Sbjct: 180 REMINLGFHDAYRHIHGEKEGYTYWDYMRGAWQKNNGLRIDHFLVSNSLLNIVKNVNINK 239

Query: 244 KPRGWTKPSDHTPVIVSL 261
            PRG  KPSDHTP+ + L
Sbjct: 240 DPRGKEKPSDHTPIEIEL 257


>gi|304411895|ref|ZP_07393506.1| exodeoxyribonuclease III [Shewanella baltica OS183]
 gi|307303337|ref|ZP_07583092.1| exodeoxyribonuclease III [Shewanella baltica BA175]
 gi|304349755|gb|EFM14162.1| exodeoxyribonuclease III [Shewanella baltica OS183]
 gi|306913697|gb|EFN44119.1| exodeoxyribonuclease III [Shewanella baltica BA175]
          Length = 270

 Score =  202 bits (513), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 87/268 (32%), Positives = 131/268 (48%), Gaps = 9/268 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +RAR+H L A I  + PDII LQETK  D+ FP   ++++ Y +   G K
Sbjct: 1   MKIVSFNINGLRARLHQLQALIDSHQPDIIGLQETKVHDEAFPLADVEAMGYQVHYHGGK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122
           ++ GVA+LSK  P ++    P DD D Q R I  TF   N + L + N Y P G  I   
Sbjct: 61  AHYGVAMLSKVAPEKLQKGFPTDDEDAQRRMIIGTFSQANGRPLTVFNGYFPQGESIDHP 120

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175
            KY  K  + +  + +       +E +   GD NI P   D           +      F
Sbjct: 121 TKYPAKRKFYQDLMHYLQTNHSNDEDIAIIGDINISPTDLDIGIGEVNRKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R+  + LQ+ G  D  R  H      YS++DY +  +  N+G+RID I+ +P   +
Sbjct: 181 QPEEREWLKTLQDWGLVDTFRQLHPERIERYSWFDYRSKGFDDNRGLRIDVILATPSLAA 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
            L  + +D   RG  KPSDH P+  +  
Sbjct: 241 RLVESDVDYDLRGIDKPSDHAPIWSTFK 268


>gi|94310134|ref|YP_583344.1| exodeoxyribonuclease III [Cupriavidus metallidurans CH34]
 gi|93353986|gb|ABF08075.1| exodeoxyribonuclease III (xth) [Cupriavidus metallidurans CH34]
          Length = 265

 Score =  202 bits (513), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 82/265 (30%), Positives = 137/265 (51%), Gaps = 6/265 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNP-----DIICLQETKTEDKNFPFETLQSLNYHIE 58
           + +A+WNVNS++ R+  +  W+   +      D +CLQE K  D  +P   LQ+  +H  
Sbjct: 1   MRIASWNVNSLKVRLPQVLQWLGAQDAAGTPIDALCLQELKLPDDKYPLAELQAAGFHSI 60

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
             GQK+YNGVAIL++   + + T +  +    +              +R+ + Y P+G  
Sbjct: 61  FTGQKTYNGVAILARNAAMPVPTDVVRNIPGYEDAQQRVIAGTYGD-VRLISAYFPNGQA 119

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
           + S K+  K+ W+K  + +    +     L   GD+NI P+  D ++P  WE     + +
Sbjct: 120 LDSDKFVYKLDWLKAMIEWLRAEMTRYPKLALLGDFNIAPEDRDVHDPAKWEGQNLVSPQ 179

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
            R +FQ L  +G  D+ R       ++S+WDY    + +N G+RIDHI+LS +      +
Sbjct: 180 ERDAFQTLIGLGLVDSFRMFEQPEKMFSWWDYRMMGFRRNAGLRIDHILLSADLARQCAT 239

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263
             ID +PR W +PSDHTPV+ +L +
Sbjct: 240 CVIDKEPRRWEQPSDHTPVVATLTL 264


>gi|260913979|ref|ZP_05920453.1| exodeoxyribonuclease III [Pasteurella dagmatis ATCC 43325]
 gi|260632066|gb|EEX50243.1| exodeoxyribonuclease III [Pasteurella dagmatis ATCC 43325]
          Length = 267

 Score =  202 bits (513), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 80/266 (30%), Positives = 125/266 (46%), Gaps = 8/266 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +RAR H L A I+   PD++ LQE K  D+ FP+E ++ L YH+   GQK
Sbjct: 1   MKIISFNINGLRARPHQLEAIIERYQPDVLGLQEIKVADEVFPYELVEHLGYHVFHHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122
            + GVA+L+K +P  +    P D  D Q R I A F  +   L + N Y P G      T
Sbjct: 61  GHYGVALLTKQEPKAVRKGFPTDAEDAQKRIIMADFETDFGLLTVVNGYFPQGESRQHET 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  +     ++  +   ++ P+I  GD NI P         +     +      F 
Sbjct: 121 KFPAKEKFYADLQQYLEKDHNVDNPIIIMGDMNISPTDLDIGIGDENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+   +L   G  D  R  +   +  +S++DY +  +  N+G+RIDHI+ +    + 
Sbjct: 181 PEEREWMNRLYGYGLVDTFRHLNPDVNDKFSWFDYRSKGFDDNRGLRIDHIIANHSLAAR 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
                I    R   KPSDH PV    
Sbjct: 241 CVDTGIALDIRAMEKPSDHAPVWAEF 266


>gi|325203504|gb|ADY98957.1| exodeoxyribonuclease III [Neisseria meningitidis M01-240355]
          Length = 256

 Score =  202 bits (513), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 90/260 (34%), Positives = 134/260 (51%), Gaps = 4/260 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + TWNVNS+  R+  +   + +N PDI+ LQE K +   FP   LQ + +H    GQK
Sbjct: 1   MKITTWNVNSLNVRLPQVQNLLADNPPDILVLQELKLDQDKFPAAALQMMGWHCVWSGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAI+S+  P ++   LP    D Q R I AT       +R+ N+Y  +G  + S K
Sbjct: 61  TYNGVAIVSRNAPEDVHIVLPALPDDPQRRVIAATVGG----VRVINVYCVNGEALDSPK 116

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K  W      F    +     L+  GD+NI P   DCY+P  W      +   RQ F
Sbjct: 117 FKYKEQWFAALTEFVRDEMTRYGKLVLLGDFNIAPADADCYDPEKWHEKIHCSSVERQWF 176

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + L ++G TD++R  H     Y+++DY    + +  G+RIDHI++SP   + L   R+D 
Sbjct: 177 KNLLDLGLTDSLRQVHPEGAFYTWFDYRGAMFQRKLGLRIDHILVSPAMAAALKDVRVDL 236

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
           + R   +PSDH PV    D 
Sbjct: 237 ETRALERPSDHAPVTAEFDW 256


>gi|261252552|ref|ZP_05945125.1| exodeoxyribonuclease III [Vibrio orientalis CIP 102891]
 gi|260935943|gb|EEX91932.1| exodeoxyribonuclease III [Vibrio orientalis CIP 102891]
          Length = 268

 Score =  201 bits (512), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 82/268 (30%), Positives = 135/268 (50%), Gaps = 9/268 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V ++N+N +RAR+H L A I ++ PD+I LQE K  D+ FP E ++++ Y +   GQK
Sbjct: 1   MKVISFNINGLRARLHQLQAVIDKHQPDVIGLQEIKVHDEAFPLEDVEAMGYKVYFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT-FTINTQTLRIGNLYLPHGNPITS- 121
           ++ GVA+L K +P+ +    P D+ D Q R I  T    N + + + N Y P G+ I   
Sbjct: 61  AHYGVAMLCKKEPLSVQKGFPTDNEDHQKRMIMVTLEDDNGEKVTVLNGYFPQGDNIGHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175
           TK+  K  +    + + +     +E LI  GD NI P               +      F
Sbjct: 121 TKFPYKRQFYSDLMTYLNDHHSNDEQLIVMGDINISPIDADIGIGEPNRKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R+  + L + GF D  R  H   +  +S++DY +  +  N+G+RID ++ +P+   
Sbjct: 181 QPEEREWLKTLLDWGFVDTFRQIHPDVNDRFSWFDYRSKGFPDNRGLRIDVVLATPKLAE 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
               + +D + RG  KPSDH P+  +  
Sbjct: 241 KCIESDVDYELRGIEKPSDHAPIWSTFK 268


>gi|124514320|gb|EAY55834.1| Exodeoxyribonuclease III [Leptospirillum rubarum]
          Length = 265

 Score =  201 bits (512), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 78/257 (30%), Positives = 127/257 (49%), Gaps = 5/257 (1%)

Query: 7   ATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYN 66
            TWNVNS++ R+  +  W+     D++CLQETK  D  FPF+  + + Y     GQ +YN
Sbjct: 14  TTWNVNSLKVRLPQVLDWLLREKADVVCLQETKLPDAQFPFQAFREIGYDAVWSGQPTYN 73

Query: 67  GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDD 126
           GVAILS        T +     D +              +RI N+Y+P+G  + S K+  
Sbjct: 74  GVAILSNTPIEMTETSMDDHPDDHRRFLSARVRG-----VRIVNVYVPNGQDLDSPKFAY 128

Query: 127 KISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL 186
           K+ W+ R  R+  +     +P++  GD+NI+P   D ++P  +++    +   R +   +
Sbjct: 129 KLEWLNRLTRYIEKVRAAPDPVLLMGDFNIVPGDLDTWDPAGFKDQIFHSPPERNALGNI 188

Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR 246
              GF D  R  +     +S+WDY   S+ +N+G+RID I+ +P  +       ID + R
Sbjct: 189 FRTGFADLYRTLYPDRQEFSWWDYRMGSFHRNRGLRIDLILSTPPLSEQCQEVFIDREAR 248

Query: 247 GWTKPSDHTPVIVSLDI 263
              +PSDH PV     +
Sbjct: 249 KAERPSDHVPVTALFAL 265


>gi|254286781|ref|ZP_04961735.1| exodeoxyribonuclease III [Vibrio cholerae AM-19226]
 gi|150423208|gb|EDN15155.1| exodeoxyribonuclease III [Vibrio cholerae AM-19226]
          Length = 268

 Score =  201 bits (512), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 78/268 (29%), Positives = 127/268 (47%), Gaps = 9/268 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V ++N+N +RAR+H L A I ++ PD+I LQE K  D+ FP + ++++ Y +   GQK
Sbjct: 1   MKVISFNINGLRARLHQLQALIDKHQPDVIGLQEIKVHDEAFPRQEVEAMGYQVYFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           ++ GVAIL K  P+E++   P  ++   +   +      N Q   I N Y P G+ +   
Sbjct: 61  AHYGVAILCKQTPVEVIKGFPTDNEEHQKRMIMATFADQNGQKTTILNGYFPQGDNVEHK 120

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175
            K+  K  + +  + +  +     E L+  GD NI P               +      F
Sbjct: 121 TKFPYKRQFYRDLMTYLREHRSNSERLVVMGDINISPLDLDIGIGEANRKRWLQTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R+  Q L + G  D  R  H      +S++DY +  +  N+G+RID I+ +P    
Sbjct: 181 QPEEREWLQTLLDWGLVDTFRQLHPDVSDQFSWFDYRSRGFEDNRGLRIDVILATPTLAE 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
               A ID + R   KPSDH P+  +  
Sbjct: 241 TCQEAGIDYELRAIDKPSDHAPIWATFK 268


>gi|153825215|ref|ZP_01977882.1| exodeoxyribonuclease III [Vibrio cholerae MZO-2]
 gi|153830542|ref|ZP_01983209.1| exodeoxyribonuclease III [Vibrio cholerae 623-39]
 gi|229523879|ref|ZP_04413284.1| exodeoxyribonuclease III [Vibrio cholerae bv. albensis VL426]
 gi|229529117|ref|ZP_04418507.1| exodeoxyribonuclease III [Vibrio cholerae 12129(1)]
 gi|297579378|ref|ZP_06941306.1| exodeoxyribonuclease III [Vibrio cholerae RC385]
 gi|148873972|gb|EDL72107.1| exodeoxyribonuclease III [Vibrio cholerae 623-39]
 gi|149741194|gb|EDM55245.1| exodeoxyribonuclease III [Vibrio cholerae MZO-2]
 gi|229332891|gb|EEN98377.1| exodeoxyribonuclease III [Vibrio cholerae 12129(1)]
 gi|229337460|gb|EEO02477.1| exodeoxyribonuclease III [Vibrio cholerae bv. albensis VL426]
 gi|297536972|gb|EFH75805.1| exodeoxyribonuclease III [Vibrio cholerae RC385]
 gi|327484412|gb|AEA78819.1| Exodeoxyribonuclease III [Vibrio cholerae LMA3894-4]
          Length = 268

 Score =  201 bits (512), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 79/268 (29%), Positives = 128/268 (47%), Gaps = 9/268 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V ++N+N +RAR+H L A I ++ PD+I LQE K  D+ FP + ++++ Y +   GQK
Sbjct: 1   MKVISFNINGLRARLHQLQALIDKHQPDVIGLQEIKVHDEAFPRQEVEAMGYQVYFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121
           ++ GVAIL K  P+E++   P  ++   +   +      N Q   I N Y P G+ +   
Sbjct: 61  AHYGVAILCKQTPVEVIKGFPTDNEEHQKRMIMATFADQNGQKTTILNGYFPQGDNVEHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175
           TK+  K  + +  + +  +     E L+  GD NI P               +      F
Sbjct: 121 TKFPYKRQFYRDLMTYLREHRSNSERLVVMGDINISPLDLDIGIGEANRKRWLQTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R+  Q L + G  D  R  H      +S++DY +  +  N+G+RID I+ +P    
Sbjct: 181 QPEEREWLQTLLDWGLVDTFRQLHPDVSDQFSWFDYRSRGFEDNRGLRIDVILATPTLAE 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
               A ID + R   KPSDH P+  +  
Sbjct: 241 TCQEAGIDYELRAIDKPSDHAPIWATFK 268


>gi|296313346|ref|ZP_06863287.1| exodeoxyribonuclease III [Neisseria polysaccharea ATCC 43768]
 gi|296840163|gb|EFH24101.1| exodeoxyribonuclease III [Neisseria polysaccharea ATCC 43768]
          Length = 256

 Score =  201 bits (512), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 90/260 (34%), Positives = 135/260 (51%), Gaps = 4/260 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + TWNVNS+  R+  +   + +N PDI+ LQE K +   FP   LQ + +H    GQK
Sbjct: 1   MKITTWNVNSLNVRLPQVQNLLADNPPDILVLQELKLDQDKFPAAALQMMGWHCVWSGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAI+S+  P ++   LP    D Q R I AT       +R+ N+Y  +G  + S K
Sbjct: 61  TYNGVAIISRSVPQDVHFGLPSLPDDPQRRVIAATVGG----VRVINVYCVNGEALDSPK 116

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K  W      F    +     L+  GD+NI P   DCY+P  W      +   RQ F
Sbjct: 117 FKYKEQWFAALTEFVRDEMTRYGKLVLLGDFNIAPADADCYDPEKWYEKIHCSSVERQWF 176

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q L ++G TD++R  H     Y+++DY    + +  G+RIDHI+++ E  ++L   R+D 
Sbjct: 177 QNLLDLGLTDSLRQVHPEGAFYTWFDYRGAMFQRKLGLRIDHILVTSEMAAVLKDVRVDL 236

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
             R   +PSDH PV    D+
Sbjct: 237 DTRALERPSDHAPVAAEFDL 256


>gi|71898520|ref|ZP_00680691.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Xylella
           fastidiosa Ann-1]
 gi|182681462|ref|YP_001829622.1| exodeoxyribonuclease III Xth [Xylella fastidiosa M23]
 gi|71731644|gb|EAO33704.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Xylella
           fastidiosa Ann-1]
 gi|182631572|gb|ACB92348.1| exodeoxyribonuclease III Xth [Xylella fastidiosa M23]
 gi|307579913|gb|ADN63882.1| exodeoxyribonuclease III Xth [Xylella fastidiosa subsp. fastidiosa
           GB514]
          Length = 264

 Score =  201 bits (512), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 86/261 (32%), Positives = 136/261 (52%), Gaps = 6/261 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A+WNVNS+  R+  L  W+ E  PD++ LQETK ED  FP   L +L Y     GQK
Sbjct: 3   MRIASWNVNSLNVRLSQLQQWLVEAAPDVLGLQETKLEDHQFPEAALAALGYVSVYAGQK 62

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVA+L++    ++   +P                     +R+ NLY+ +G  + + K
Sbjct: 63  TYNGVALLARVALEDVQVGIP-----EFEDVQRRVIAATVDGIRVVNLYVVNGQEVGTDK 117

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+SW+     + ++ L+    L+  GD+NI P   D Y+P +W  D   T    ++ 
Sbjct: 118 YAYKLSWLDAVYHWLAEELQRYPRLVVLGDFNIAPDARDVYDPQVWNEDHILTSTTERAA 177

Query: 184 -QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
             KL  +G  D  R  H    ++S+WDY   S+ +N+G+RID  ++S    +   ++ ID
Sbjct: 178 LDKLLGLGLHDGFRLHHQDAGIFSWWDYRQASFRRNRGLRIDLTLVSEALRAQAVASGID 237

Query: 243 TKPRGWTKPSDHTPVIVSLDI 263
             PRGW +PSDH P  + L +
Sbjct: 238 RVPRGWERPSDHAPAWIELAL 258


>gi|332036974|gb|EGI73433.1| exodeoxyribonuclease III [Pseudoalteromonas haloplanktis ANT/505]
          Length = 268

 Score =  201 bits (512), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 79/268 (29%), Positives = 124/268 (46%), Gaps = 9/268 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V ++N+N +RAR+H L A I ++ PD+I LQE K  D+ FP E +Q + YH+   GQK
Sbjct: 1   MKVISFNINGLRARLHQLQAIIDKHQPDVIGLQEIKVHDEAFPLEDVQKMGYHVYFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHL-PGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121
           ++ GVA+L K +P  ++       +   +          N + L + N Y P G+ I   
Sbjct: 61  AHYGVAMLCKKEPKSVLKGFATDTEESQKRMISVTVEQDNGRDLTVMNGYFPQGDNINHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175
           TK+  K  + K  +          + +I  GD NI P   D           +      F
Sbjct: 121 TKFPYKRQFYKDLMTHLETNHTPVQDVIVMGDINISPTDLDIGIGEVNAKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
               R+    L N GF D  R  +      YS++DY +  +  N+G+RID ++ + E  +
Sbjct: 181 QPVEREWLATLLNWGFKDTFREQNPETDDQYSWFDYRSKGFVDNRGLRIDVVLATNELAA 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
                 ID + RG  KPSDH P+  +  
Sbjct: 241 RCIDTGIDYELRGIEKPSDHAPIWSTFK 268


>gi|118580060|ref|YP_901310.1| exonuclease III [Pelobacter propionicus DSM 2379]
 gi|118502770|gb|ABK99252.1| Exodeoxyribonuclease III [Pelobacter propionicus DSM 2379]
          Length = 270

 Score =  201 bits (512), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 89/270 (32%), Positives = 135/270 (50%), Gaps = 11/270 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++NVN +R+R+H L A I    P+II LQETK  D+ FP + +QSL YH+   GQK
Sbjct: 1   MKIVSFNVNGLRSRLHQLEALINAQRPEIIALQETKVRDEEFPVDAVQSLGYHVVFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI-NTQTLRIGNLYLPHGNPITS- 121
           ++ GVA+LS+    ++   LPGD  + Q RFI AT  + +   +R+ N Y P G      
Sbjct: 61  THYGVALLSRLPLQDVQLGLPGDGDEAQKRFIAATIPLSDGTPVRVINGYFPQGENRDHA 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE------NDACF 175
            K+  K  +    L       +   PL+  GD+N+ P+  D                 CF
Sbjct: 121 VKFPAKQRFYAELLGHLQGECDPATPLVVLGDFNVAPRDMDLGIGTDNVKRWLKSGKCCF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSW--SKNKGIRIDHIMLSPEA 232
             E R  F+ L   G  D+ R  +      +S++DY +  +     +G+RIDHI+L+   
Sbjct: 181 LPEERLWFECLIEWGLHDSFRELNPAVADRFSWFDYRSRGFEGEPKRGLRIDHILLTRSL 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
            +   +A ID   R   KPSDH PV V ++
Sbjct: 241 LARCRAAGIDYDIRSMAKPSDHCPVWVEIE 270


>gi|238919557|ref|YP_002933072.1| exodeoxyribonuclease III, putative [Edwardsiella ictaluri 93-146]
 gi|238869126|gb|ACR68837.1| exodeoxyribonuclease III, putative [Edwardsiella ictaluri 93-146]
          Length = 269

 Score =  201 bits (512), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 80/269 (29%), Positives = 124/269 (46%), Gaps = 8/269 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H LAA +++++PD+I LQETK  D  FP + L  L Y +   GQK
Sbjct: 1   MKFISFNINGLRARPHQLAAIVEKHSPDVIGLQETKVHDDMFPLQDLAHLGYQLHYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            + GVA+L++  P+ +    PGDD + Q R I A       TL + N Y P G       
Sbjct: 61  GHYGVALLTRMAPLAVRKGFPGDDAEAQRRVIMADIPTELGTLTVINGYFPQGESRDHPI 120

Query: 124 -YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC------YNPIIWENDACFT 176
            +  K  +     R+    L  + P++  GD NI P+  D           +      F 
Sbjct: 121 KFPAKSKFYADLQRYLQDSLTPQNPVLIMGDMNISPRDIDIGIGDESRRRWLRSGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+   +L   G  D  R  +      +S++DY +  +  N+G+RID ++ S      
Sbjct: 181 PEEREWLDRLLAWGLVDTYRQANPQGDDHFSWFDYRSKGFDDNRGLRIDLLLASQPLAQR 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
                ID + R   KPSDH P+     + 
Sbjct: 241 CTDTGIDYEIRAMEKPSDHAPIWAEFALS 269


>gi|114047018|ref|YP_737568.1| exonuclease III [Shewanella sp. MR-7]
 gi|113888460|gb|ABI42511.1| Exodeoxyribonuclease III [Shewanella sp. MR-7]
          Length = 270

 Score =  201 bits (512), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 86/268 (32%), Positives = 131/268 (48%), Gaps = 9/268 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +R+R+H L A I  + PDII LQETK  D+ FP   ++++ YH+   G K
Sbjct: 1   MKIVSFNINGLRSRLHQLQALIDSHQPDIIGLQETKVHDEAFPLAEVEAMGYHVHYHGGK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122
           ++ GVA+LSK  PI++      D+ D Q R I  TF   N + L + N Y P G  I   
Sbjct: 61  AHYGVAMLSKAAPIKVQKGFATDEEDAQRRMIIGTFAQANGRPLTVLNGYFPQGESIDHP 120

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175
            KY  K  + +  +         +E +   GD NI P   D           +      F
Sbjct: 121 TKYPAKRKFYQDLMAHLHANHSNDEDIAIIGDINISPIDLDIGIGEVNRKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R+  + LQ+ G  D  R  H      YS++DY +  +  N+G+RID I+ +P   +
Sbjct: 181 QPEEREWLKTLQDWGLVDTFRQLHPDRSERYSWFDYRSKGFDDNRGLRIDVILATPSLAA 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
            L  + +D   RG  KPSDH P+  +  
Sbjct: 241 RLIESDVDYDLRGIDKPSDHAPIWSTFK 268


>gi|317048409|ref|YP_004116057.1| exodeoxyribonuclease III [Pantoea sp. At-9b]
 gi|316950026|gb|ADU69501.1| exodeoxyribonuclease III [Pantoea sp. At-9b]
          Length = 268

 Score =  201 bits (512), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 79/268 (29%), Positives = 127/268 (47%), Gaps = 8/268 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A ++++ PD+I LQETK  D  FP E +  L YH+   GQK
Sbjct: 1   MKFVSFNINGLRARPHQLEALVEQHQPDVIGLQETKVHDDMFPLEEVSKLGYHVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            + GVA+L+K +P+ +    P D  D Q R I A        + + N Y P G       
Sbjct: 61  GHYGVALLTKAEPVAVHRGFPSDGEDAQRRLIMAEIPSPIGDITVINGYFPQGESRDHPI 120

Query: 124 -YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
            +  K  + +    +   +L +++P++  GD NI           +     +      F 
Sbjct: 121 KFPAKEKFYQDLQSYLQTQLAVDKPVLIMGDMNISSTDLDIGIGEENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+   +L N G  D  RA +      +S++DY +  +  N+G+RID ++ S    S 
Sbjct: 181 PEEREWMDRLLNWGLVDTWRAQYPETADRFSWFDYRSKGFDDNRGLRIDLLLASQPLASR 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             ++ ID   R   KPSDH PV  +  +
Sbjct: 241 CIASGIDYDIRSMEKPSDHAPVWSTFKL 268


>gi|260779121|ref|ZP_05888013.1| exodeoxyribonuclease III [Vibrio coralliilyticus ATCC BAA-450]
 gi|260605285|gb|EEX31580.1| exodeoxyribonuclease III [Vibrio coralliilyticus ATCC BAA-450]
          Length = 268

 Score =  201 bits (512), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 79/268 (29%), Positives = 133/268 (49%), Gaps = 9/268 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V ++N+N +RAR+H L A I ++ PD+I LQE K  D+ FP E ++++ Y +   GQK
Sbjct: 1   MKVISFNINGLRARLHQLQAVIDKHQPDVIGLQEIKVHDEAFPIEDVEAMGYKVYFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121
           ++ GVA+L K +P+ +    P  ++   +   +      N + + + N Y P G+ I+  
Sbjct: 61  AHYGVAMLCKKEPLSVQKGFPTDNEDHQKRMIMATFEDDNGEKVTVLNGYFPQGDNISHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175
           TKY  K  + K  + + +     +E LI  GD NI P               +      F
Sbjct: 121 TKYPYKRQFYKDLMTYLNDHHNNDEQLIVMGDINISPIDADIGIGEPNRKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R+  + L + GF D  R  H      +S++DY +  +  N+G+RID ++ +P+   
Sbjct: 181 QPEEREWLKTLMDWGFVDTFRQLHPEVEDRFSWFDYRSRGFDDNRGLRIDVVLATPKLAE 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
               + ID + RG  KPSDH P+  +  
Sbjct: 241 KCIESDIDYELRGIEKPSDHAPIWSTFK 268


>gi|148548014|ref|YP_001268116.1| exonuclease III [Pseudomonas putida F1]
 gi|148512072|gb|ABQ78932.1| Exodeoxyribonuclease III [Pseudomonas putida F1]
          Length = 270

 Score =  201 bits (512), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 86/269 (31%), Positives = 132/269 (49%), Gaps = 11/269 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +  +N+N +RAR H LAA I+++ PD+I LQETK  D  FP   +Q+L YH+   GQK
Sbjct: 1   MKIVCFNINGLRARPHQLAALIEKHQPDVIGLQETKVSDDQFPLADVQALGYHVHYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122
            + GVA+LS+  P+ +      D+ D Q RFI  TF   N   + I N Y P G      
Sbjct: 61  GHYGVALLSRQAPLSLHKGFATDEEDAQRRFIWGTFADANGSPITIMNGYFPQGESRDHP 120

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175
            K+  K  +          +   ++P++  GD NI PQ        D     +      F
Sbjct: 121 TKFPAKQRFYSDLQALLESQFRNDQPVLVMGDMNISPQDCDIGIGPDNAKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232
             E R+  ++L+  G  D+ R  +      +S++DY +  +     +G+RID IM S   
Sbjct: 181 LPEEREWMERLKGWGLVDSFRHLYPEVTDRFSWFDYRSRGFEDEPKRGLRIDLIMASQPL 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
              + +A +D + RG  KPSDH P+ + L
Sbjct: 241 VPRIKAAGVDYELRGMEKPSDHAPIWLEL 269


>gi|71275821|ref|ZP_00652105.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Xylella
           fastidiosa Dixon]
 gi|71902300|ref|ZP_00684290.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Xylella
           fastidiosa Ann-1]
 gi|170730198|ref|YP_001775631.1| exodeoxyribonuclease III [Xylella fastidiosa M12]
 gi|71163399|gb|EAO13117.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Xylella
           fastidiosa Dixon]
 gi|71727953|gb|EAO30176.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Xylella
           fastidiosa Ann-1]
 gi|167964991|gb|ACA12001.1| exodeoxyribonuclease III [Xylella fastidiosa M12]
          Length = 264

 Score =  201 bits (512), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 86/261 (32%), Positives = 138/261 (52%), Gaps = 6/261 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A+WNVNS+  R+  L  W+ E  PD++ LQETK ED  FP   L +L Y     GQK
Sbjct: 3   MRIASWNVNSLNVRLSQLQQWLVEAAPDVLGLQETKLEDHQFPGAALAALGYVSVYAGQK 62

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVA+L++    ++   +P  +   +              +R+ NLY+ +G  + + K
Sbjct: 63  TYNGVALLARVALEDVQVGIPEFEDVQRRVIAATVDG-----IRVVNLYVVNGQEVGTEK 117

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+SW+     + ++ L+    L+  GD+NI P   D Y+P +W  D   T    ++ 
Sbjct: 118 YAYKLSWLDAVYHWLAEELQRYPRLVVLGDFNIAPDARDVYDPQVWNEDHILTSTTERAA 177

Query: 184 -QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
             KL  +G  D  R  H    ++S+WDY   S+ +N+G+RID  ++S    +   ++ ID
Sbjct: 178 LDKLLGLGLHDGFRLHHQDAGIFSWWDYRQASFRRNRGLRIDLTLVSEALRAQAVASGID 237

Query: 243 TKPRGWTKPSDHTPVIVSLDI 263
             PRGW +PSDH P  + L +
Sbjct: 238 RVPRGWERPSDHAPAWIELAL 258


>gi|300742521|ref|ZP_07072542.1| exodeoxyribonuclease III [Rothia dentocariosa M567]
 gi|300381706|gb|EFJ78268.1| exodeoxyribonuclease III [Rothia dentocariosa M567]
          Length = 278

 Score =  201 bits (512), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 76/265 (28%), Positives = 123/265 (46%), Gaps = 7/265 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSIRAR   +  W+ +   D++ LQETKT+D+ FPFE  + L Y +   G  
Sbjct: 12  MKIATWNVNSIRARADRIEDWLDKTEVDVLALQETKTKDETFPFELFEFLGYEVAHYGLN 71

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLD----VQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            +NGVAI S+     +    P           A             +RI +LY+P+G  +
Sbjct: 72  QWNGVAIASRVGLDSVERTFPNQPAFGKPGDPAEVEARAIGATCNGVRIWSLYVPNGRGL 131

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEE--PLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
           T      K+ W+++     +  L  +        GD+N+ P+  D ++   +  +    +
Sbjct: 132 TDPHMAYKMEWMRQLRTNVNGWLHADPAAQFALVGDWNVAPEDTDVWDIDFFRENDLTHV 191

Query: 178 EVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
              +       +     I          Y++WDY A  +SKN+G+RID  + SP   + +
Sbjct: 192 SAPEREAFYALLNDEGLIDPVRPYTQGEYTYWDYQAGRFSKNEGMRIDFQLCSPALAARV 251

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSL 261
            +A ID + R     SDHTPV++ L
Sbjct: 252 ENAWIDREEREGDGASDHTPVVIEL 276


>gi|261391913|emb|CAX49373.1| exodeoxyribonuclease III (exonuclease III; EXO III) [Neisseria
           meningitidis 8013]
          Length = 256

 Score =  201 bits (512), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 90/260 (34%), Positives = 133/260 (51%), Gaps = 4/260 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + TWNVNS+  R+  +   + +N PDI+ LQE K +   FP   LQ + +H    GQK
Sbjct: 1   MKITTWNVNSLNVRLPQVQNLLADNPPDILVLQELKLDQDKFPAAALQMMGWHCVWSGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAI+S+  P ++   LP    D Q R I AT       +R+ N+Y  +G  + S K
Sbjct: 61  TYNGVAIVSRNAPEDVHIGLPALPDDPQRRVIAATVGG----VRVINVYCVNGEALDSPK 116

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K  W      F    +     L+  GD+NI P   DCY+P  W      +   RQ F
Sbjct: 117 FKYKEQWFAALTEFVRDEMTRYGKLVLLGDFNIAPADADCYDPEKWHEKIHCSSVERQWF 176

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + L ++G TD++R  H     Y+++DY    + +  G+RIDHI++SP     L   R+D 
Sbjct: 177 KNLLDLGLTDSLRQVHPEGAFYTWFDYRGAMFQRKLGLRIDHILVSPAMVEALKDVRVDL 236

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
           + R   +PSDH PV    D 
Sbjct: 237 ETRALERPSDHAPVAAEFDW 256


>gi|188533711|ref|YP_001907508.1| Exodeoxyribonuclease III [Erwinia tasmaniensis Et1/99]
 gi|188028753|emb|CAO96615.1| Exodeoxyribonuclease III [Erwinia tasmaniensis Et1/99]
          Length = 268

 Score =  201 bits (512), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 83/268 (30%), Positives = 127/268 (47%), Gaps = 8/268 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A ++++ PD+I LQETK  D  FP E + SL YH+   GQK
Sbjct: 1   MKFVSFNINGLRARPHQLQAIVEQHQPDVIGLQETKVHDDMFPLEEVASLGYHVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122
            + GVA+L K QPI +     GDD D Q R I A    +   + + N Y P G       
Sbjct: 61  GHYGVAMLCKQQPIAVRRGFEGDDEDAQRRIIMADIPTSDGVITVLNGYFPQGESRDHPT 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACFT 176
           K+  K  + +    +  Q+ + +  ++  GD NI     D           +      F 
Sbjct: 121 KFPAKEKFYRDLQSYLEQQQKADNQVVIMGDMNISSSDLDIGIGEVNRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+   +L N G  D  RA + + +  +S++DY +  +  N+G+RID I+ S      
Sbjct: 181 PEEREWMDRLMNWGLVDTWRAQNAEVNDRFSWFDYRSKGFDDNRGLRIDLILASRPLAGR 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             +  ID   R   KPSDH P+     +
Sbjct: 241 CVATGIDYDIRAMEKPSDHAPIWAQFSL 268


>gi|120554411|ref|YP_958762.1| exodeoxyribonuclease III [Marinobacter aquaeolei VT8]
 gi|120324260|gb|ABM18575.1| Exodeoxyribonuclease III [Marinobacter aquaeolei VT8]
          Length = 270

 Score =  201 bits (512), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 87/271 (32%), Positives = 137/271 (50%), Gaps = 11/271 (4%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           ++   ++NVNSIR R+H L A I++ NPD+I LQETK  D+ FP E ++ L YH+   GQ
Sbjct: 1   MM-FVSFNVNSIRTRLHQLEAVIQQLNPDVIGLQETKVTDEEFPVEAIRELGYHVHFHGQ 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K++ GVA+LS+ +P +++   P D  D Q R I   FT+N + L + N Y P G      
Sbjct: 60  KTHYGVALLSRAKPEQVIKGYPSDGEDSQRRLITGHFTVNGEPLTVINGYFPQGESRDHP 119

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175
            K+  K  +    + +  +  +    ++  GD NI P         D     +      F
Sbjct: 120 VKFPAKEKFYADLMAYLDELTKKPGHILVMGDMNISPTDRDIGIGADNAKRWLRSGKCSF 179

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKN--KGIRIDHIMLSPEA 232
             E R+   +++  GFTD  R  H    + +S++DY +  + ++  +G+RID IM S   
Sbjct: 180 LPEEREWLGQVEQRGFTDVFRHLHPDEANTFSWFDYRSKGFERDPRRGLRIDLIMASDSL 239

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                +A +    R   +PSDH PV  S D+
Sbjct: 240 LPKAKAAGVSYDIRAMERPSDHCPVWASFDL 270


>gi|256833636|ref|YP_003162363.1| exodeoxyribonuclease III Xth [Jonesia denitrificans DSM 20603]
 gi|256687167|gb|ACV10060.1| exodeoxyribonuclease III Xth [Jonesia denitrificans DSM 20603]
          Length = 264

 Score =  201 bits (511), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 75/261 (28%), Positives = 127/261 (48%), Gaps = 4/261 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A+WN+NSIRAR     A ++ ++ D++ LQETK +D+ FP    +   Y +   G  
Sbjct: 1   MRLASWNINSIRARTDRALAVLERHDIDVLALQETKCKDEQFPVAAFEEAGYEVAHVGVN 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ-TLRIGNLYLPHGNPITST 122
            +NGVA++S+    ++    PG     +   +EA         +R+ +LY+P+G  I   
Sbjct: 61  QWNGVALISRVGLDDVHRAFPGQPGFGEDPVVEARAVGAICGGVRVWSLYVPNGREIDHP 120

Query: 123 KYDDKISWIKRFLRFASQRLELEE--PLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
            Y  K+ W+ +    A Q    +    +   GD+N+ P+  D ++   +E     T   R
Sbjct: 121 HYHYKLQWLHQLKNSAQQWTADDPAAQVALVGDWNVAPRDTDVWDREFFEGKTHVTDPER 180

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            +F    ++G+T+  R       +Y++WDY    + KN+G+RID    SP  T  +    
Sbjct: 181 AAFAAFGDIGYTEVSRVHVP-EDVYTYWDYQQLRFPKNQGMRIDFAWCSPALTKRVTGVE 239

Query: 241 IDTKPRGWTKPSDHTPVIVSL 261
           ID   R     SDH PVI+ +
Sbjct: 240 IDRNERKGKGASDHVPVILDI 260


>gi|119961356|ref|YP_946272.1| exodeoxyribonuclease III [Arthrobacter aurescens TC1]
 gi|119948215|gb|ABM07126.1| exodeoxyribonuclease III [Arthrobacter aurescens TC1]
          Length = 268

 Score =  201 bits (511), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 79/266 (29%), Positives = 127/266 (47%), Gaps = 8/266 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+RAR   + AW++ ++ D++ +QETK +D+NFP+E  + + Y +   G  
Sbjct: 1   MKIATWNVNSLRARADRVEAWLERSDCDVLAIQETKCKDENFPWELFERMGYEVAHFGVN 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLD----VQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            +NGVAI S+    ++                              +RI +LY+P+G  +
Sbjct: 61  QWNGVAIASRVGLDDVQRTFLDQPAFGKAGKDPAQEARAIAATCGGIRIWSLYVPNGRSL 120

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEE--PLIFAGDYNIIPQPHDCYNP--IIWENDACF 175
                  KI W+      A++ ++ E    +   GD+NI P   D ++       N    
Sbjct: 121 DDEHMPYKIKWLDVLQGHAAEWVKSEPTAQIALMGDWNIAPFDDDVWDIELFRNNNYTHV 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
           +   R +F   +  GFTD +R       +Y++WDY    + K +G+RID  + SP   S 
Sbjct: 181 SEPERAAFHAFETAGFTDVVRPYTPGPGVYTYWDYTQLRFPKKEGMRIDFCLASPALASR 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
           +  A ID + R     SDH PVIV L
Sbjct: 241 VTGASIDREERKGKGASDHAPVIVEL 266


>gi|323494946|ref|ZP_08100037.1| exonuclease III [Vibrio brasiliensis LMG 20546]
 gi|323310741|gb|EGA63914.1| exonuclease III [Vibrio brasiliensis LMG 20546]
          Length = 268

 Score =  201 bits (511), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 79/268 (29%), Positives = 132/268 (49%), Gaps = 9/268 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V ++N+N +RAR+H L A I ++ PD+I LQE K  D+ FP E ++++ Y +   GQK
Sbjct: 1   MKVISFNINGLRARLHQLQAVIDKHQPDVIGLQEIKVHDEAFPLEDVEAMGYKVYFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121
           ++ GVA+L K +PI +    P  ++   +   +      N + + I N Y P G+ I   
Sbjct: 61  AHYGVAMLCKKEPISVQKGFPTDNEDHQKRMIMVTVEDDNGEKVTILNGYFPQGDNINHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175
           TK+  K  +    + + +     +E LI  GD NI P               +      F
Sbjct: 121 TKFPYKRQFYSDLMTYLNDHHTNDEQLIVMGDINISPIDADIGIGEPNRKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E RQ  + L + GF D  R  H   +  +S++DY +  +  N+G+RID ++ +P+   
Sbjct: 181 QPEERQWLKTLLDWGFVDTFRQIHPDVNDRFSWFDYRSKGFPDNRGLRIDVVLATPKLAE 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
               + +D + RG  KPSDH P+  +  
Sbjct: 241 KCIESDVDYELRGIEKPSDHAPIWSTFK 268


>gi|191171643|ref|ZP_03033190.1| exodeoxyribonuclease III [Escherichia coli F11]
 gi|190907973|gb|EDV67565.1| exodeoxyribonuclease III [Escherichia coli F11]
          Length = 268

 Score =  201 bits (511), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 79/266 (29%), Positives = 124/266 (46%), Gaps = 8/266 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A ++++ PD+I LQETK  D  FP E +  L Y++   GQK
Sbjct: 1   MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDVMFPLEEVAKLGYNVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            + GVA+L+K  PI +    PGDD + Q R I A        + + N Y P G       
Sbjct: 61  GHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSPLGNVTVINGYFPQGESRDHPI 120

Query: 124 -YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
            +  K  + +    +    L+ E P++  GD NI P         +     +      F 
Sbjct: 121 KFPAKAQFYQNLQNYLETELKRENPVLIMGDMNISPGDLDIGIGEENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+  ++L + G  D  R  +      +S++DY +  +  N+G+RID ++ S      
Sbjct: 181 PEEREWMERLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAEC 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
                ID + R   KPSDH PV  + 
Sbjct: 241 CVETGIDYEIRSMEKPSDHAPVWATF 266


>gi|157374807|ref|YP_001473407.1| exonuclease III [Shewanella sediminis HAW-EB3]
 gi|157317181|gb|ABV36279.1| exodeoxyribonuclease III [Shewanella sediminis HAW-EB3]
          Length = 268

 Score =  201 bits (511), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 86/268 (32%), Positives = 135/268 (50%), Gaps = 9/268 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N IRAR+H L A I  + PD+I LQETK  D  FP   ++++ Y +   G K
Sbjct: 1   MKIVSFNINGIRARLHQLQALIDSHQPDVIGLQETKAHDDVFPVADVEAMGYKVHYHGGK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI-NTQTLRIGNLYLPHGNPITS- 121
           ++ GVA+LSK +P+++    P DD + Q R I  TFT  N + L I N Y P G+ I+  
Sbjct: 61  AHYGVAMLSKLEPVKVQKGFPTDDDEAQRRMIMGTFTQENGRPLTILNGYFPQGDNISHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175
           TKY  K  + K  + + ++    +E +   GD NI P               +      F
Sbjct: 121 TKYPAKRKFYKDLMVYLNEHHTPDEDIAIIGDINISPVDLDIGIGAPNAKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R+  + L + G  D  R  H      YS++DY +  +  N+G+RID ++ +     
Sbjct: 181 QPEEREWLKTLMDWGLVDTFRELHPERSERYSWFDYRSKGFVDNRGLRIDVVLATKSLAE 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
            L  + +D + RG  KPSDH P+  +  
Sbjct: 241 RLVESDVDYELRGIEKPSDHAPIWSTFK 268


>gi|229515240|ref|ZP_04404700.1| exodeoxyribonuclease III [Vibrio cholerae TMA 21]
 gi|229520320|ref|ZP_04409746.1| exodeoxyribonuclease III [Vibrio cholerae TM 11079-80]
 gi|229342686|gb|EEO07678.1| exodeoxyribonuclease III [Vibrio cholerae TM 11079-80]
 gi|229347945|gb|EEO12904.1| exodeoxyribonuclease III [Vibrio cholerae TMA 21]
          Length = 268

 Score =  201 bits (511), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 79/268 (29%), Positives = 128/268 (47%), Gaps = 9/268 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V ++N+N +RAR+H L A I ++ PD+I LQE K  D+ FP + ++++ Y +   GQK
Sbjct: 1   MKVISFNINGLRARLHQLQALIDKHQPDVIGLQEIKVHDEAFPRQEVEAMGYQVYFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121
           ++ GVAIL K  P+E++   P  ++   +   +      N Q   I N Y P G+ +   
Sbjct: 61  AHYGVAILCKQTPVEVIKGFPTDNEEHQKRMIMATFADQNGQKTTILNGYFPQGDNVEHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175
           TK+  K  + +  + +  +     E L+  GD NI P               +      F
Sbjct: 121 TKFPYKRQFYRDLMTYLCEHRSNSERLVVMGDINISPLDLDIGIGEANRKRWLQTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R+  Q L + G  D  R  H      +S++DY +  +  N+G+RID I+ +P    
Sbjct: 181 QPEEREWLQTLLDWGLVDTFRQLHPDVSDQFSWFDYRSRGFEDNRGLRIDVILATPTLAE 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
               A ID + R   KPSDH P+  +  
Sbjct: 241 TCQEAGIDYELRAIDKPSDHAPIWATFK 268


>gi|312172585|emb|CBX80841.1| Exonuclease III [Erwinia amylovora ATCC BAA-2158]
          Length = 301

 Score =  201 bits (511), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 82/266 (30%), Positives = 124/266 (46%), Gaps = 8/266 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A ++++ PD+I LQETK  D  FP   + SL YH+   GQK
Sbjct: 34  MKFVSFNINGLRARPHQLQAIVEQHQPDVIGLQETKVHDDMFPLAEVASLGYHVFYHGQK 93

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122
            + GVA+L K QP+ +      DD D Q R I A    ++  L + N Y P G       
Sbjct: 94  GHYGVALLCKQQPVAVRRGFASDDEDAQRRIIMADIMTHSGLLTVINGYFPQGESRDHPT 153

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  + +    +  Q+ + +  L+  GD NI           +     +      F 
Sbjct: 154 KFPAKEKFYRDLHSYLEQQQKPDNQLLIMGDMNISSGDLDIGIGEENRKRWLRTGKCSFL 213

Query: 177 LEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+   KL N G  D  RA H   +  +S++DY +  +  N+G+RID ++ S      
Sbjct: 214 PEEREWMDKLMNWGLVDTWRAQHATINDRFSWFDYRSKGFDDNRGLRIDLVLASRPLADR 273

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
             +  ID   R   KPSDH P+    
Sbjct: 274 CVATGIDYDIRAMEKPSDHAPIWAEF 299


>gi|110805445|ref|YP_688965.1| exonuclease III [Shigella flexneri 5 str. 8401]
 gi|110614993|gb|ABF03660.1| exonuclease III [Shigella flexneri 5 str. 8401]
          Length = 268

 Score =  201 bits (511), Expect = 8e-50,   Method: Composition-based stats.
 Identities = 78/266 (29%), Positives = 123/266 (46%), Gaps = 8/266 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A ++++ PD+I LQETK  D  FP E +  L Y++   GQK
Sbjct: 1   MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNMFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            + GVA+L+K  PI +    PGDD + Q R I A        + + N Y P G       
Sbjct: 61  GHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSLLGNVTVINGYFPQGESRDHPI 120

Query: 124 -YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
            +  K  + +    +    L+ + P++  GD NI P         +     +      F 
Sbjct: 121 KFPAKAQFYQNLQNYLETELKRDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+   +L + G  D  R  +      +S++DY +  +  N+G+RID ++ S      
Sbjct: 181 PEEREWMDRLMSWGVVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAEC 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
                ID + R   KPSDH PV  + 
Sbjct: 241 CVETGIDYEIRSMEKPSDHAPVWATF 266


>gi|15838527|ref|NP_299215.1| exodeoxyribonuclease III [Xylella fastidiosa 9a5c]
 gi|9107031|gb|AAF84735.1|AE004013_1 exodeoxyribonuclease III [Xylella fastidiosa 9a5c]
          Length = 264

 Score =  201 bits (511), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 86/261 (32%), Positives = 139/261 (53%), Gaps = 6/261 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A+WNVNS+  R+  L  W+ E  PD++ LQETK ED  FP   L +L Y     GQK
Sbjct: 3   MRIASWNVNSLNVRLSQLQQWLVEAAPDVLGLQETKLEDHQFPEAALAALGYVSVYAGQK 62

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVA+L++    ++   +PG +   +              +R+ NLY+ +G  + + K
Sbjct: 63  TYNGVALLARVALEDVQVGIPGFEDVQRRVIAATVDG-----IRVVNLYVVNGQEVGTEK 117

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI-IWENDACFTLEVRQS 182
           Y  K+SW+     + ++ L+    L+  GD+NI P   D Y+P    E+    +   R +
Sbjct: 118 YAYKLSWLDAVYHWLAEELQRYPRLVVLGDFNIAPDARDVYDPQVWNEDHILTSTTERVA 177

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
             KL  +G  D  R  H    ++S+WDY   S+ +N+G+RID  ++S    + + ++ ID
Sbjct: 178 LGKLLGLGLHDGFRLHHQDTGIFSWWDYRQASFRRNRGLRIDLTLVSEALRAQVVASGID 237

Query: 243 TKPRGWTKPSDHTPVIVSLDI 263
             PRGW +PSDH P  + L +
Sbjct: 238 CVPRGWERPSDHAPAWIELAL 258


>gi|206602794|gb|EDZ39275.1| Exodeoxyribonuclease III [Leptospirillum sp. Group II '5-way CG']
          Length = 265

 Score =  201 bits (511), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 79/257 (30%), Positives = 129/257 (50%), Gaps = 5/257 (1%)

Query: 7   ATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYN 66
            TWNVNS++ R+  +  W+     D++CLQETK  D  FPF+  + + Y     GQ +YN
Sbjct: 14  TTWNVNSLKVRLPQVLDWLVREKADVVCLQETKLPDAQFPFQAFREIGYDAVWSGQPTYN 73

Query: 67  GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDD 126
           GVAILS          +     D +              +RI N+Y+P+G  + S K+  
Sbjct: 74  GVAILSNTPIELTEASMDDHPDDHRRFLSARIRG-----VRIVNVYVPNGQDLDSPKFTY 128

Query: 127 KISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL 186
           K+ W+ R  R+  +  E  EP++  GD+NI+P   D ++P  +++    +   R++   +
Sbjct: 129 KLEWLNRLTRYIEKVREAREPVLLMGDFNIVPGDLDTWDPEGFKDQIFHSPPERKALGNI 188

Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR 246
              GF+D  R  +     +S+WDY   S+ +N+G+RID I+ +P  +       ID + R
Sbjct: 189 FQAGFSDLYRTLYPDRQEFSWWDYRMGSFHRNRGLRIDLILSTPPLSEQCREVFIDREAR 248

Query: 247 GWTKPSDHTPVIVSLDI 263
              +PSDH PV     +
Sbjct: 249 KAERPSDHVPVTALFSL 265


>gi|149191818|ref|ZP_01870055.1| exonuclease III [Vibrio shilonii AK1]
 gi|148834336|gb|EDL51336.1| exonuclease III [Vibrio shilonii AK1]
          Length = 268

 Score =  201 bits (511), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 78/267 (29%), Positives = 130/267 (48%), Gaps = 9/267 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V ++N+N +RAR+H L A I ++ PD+I LQE K  D+ FP E ++++ Y +   GQK
Sbjct: 1   MKVISFNINGLRARLHQLQALIDKHQPDVIGLQEIKVHDEAFPVEAVEAMGYKVYFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121
           ++ GVA+L K +PI +    P  ++   +   +     +    + + N Y P G+ I+  
Sbjct: 61  AHYGVAMLCKQEPISVQKGFPTDNEDHQKRMIMATFEDVKGDKVTVLNGYFPQGDNISHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175
           TK+  K ++ K  + + ++    +E LI  GD NI P               +      F
Sbjct: 121 TKFPYKEAFYKDLMTYLNEHHSNDEKLIVMGDINISPIDLDIGIGEPNRKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
               R+  Q L + GF D  R  H      +S++DY +  +  N+G+RID ++ +     
Sbjct: 181 QPIEREWLQTLLDWGFVDTFRQLHPNVDDQFSWFDYRSRGFDDNRGLRIDVVLATKSLAE 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261
               A ID + RG  KPSDH P+    
Sbjct: 241 TCSEAGIDYELRGIEKPSDHAPIWSVF 267


>gi|186476236|ref|YP_001857706.1| exodeoxyribonuclease III Xth [Burkholderia phymatum STM815]
 gi|184192695|gb|ACC70660.1| exodeoxyribonuclease III Xth [Burkholderia phymatum STM815]
          Length = 258

 Score =  201 bits (511), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 78/256 (30%), Positives = 125/256 (48%), Gaps = 1/256 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS++ R  ++  W++ +  D++CLQE K  D+ FP   L    Y     GQK
Sbjct: 1   MKLATWNVNSLKVRQQHVIDWLELSRTDVLCLQELKLPDEKFPRAELAEKGYRSWFAGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGV IL +   + +       ++       +       + +R+   Y P+G    + K
Sbjct: 61  TYNGVGILVRDG-VSVDEGSIVRNIPGFEDPQQRVIAATVEGVRVVCAYFPNGQAPGTDK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W+     + S  L     L   GDYNI P+  D ++P  WE     + E R  F
Sbjct: 120 FAYKLRWLDAMYEWISSELTQHPKLALLGDYNIAPEDRDVHDPKAWEGQNLVSPEERAQF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            +L  +G  D+ R        +++WDY   ++ +N G+RIDHI+LS    +      +D 
Sbjct: 180 NRLIELGLVDSFRLFDQPEKTFTWWDYRMLAFRRNAGLRIDHILLSKPLAASCTHCDVDK 239

Query: 244 KPRGWTKPSDHTPVIV 259
            PR W +PSDH PV+ 
Sbjct: 240 TPRKWDQPSDHAPVVA 255


>gi|194289407|ref|YP_002005314.1| exodeoxyribonuclease iii [Cupriavidus taiwanensis LMG 19424]
 gi|193223242|emb|CAQ69247.1| EXODEOXYRIBONUCLEASE III [Cupriavidus taiwanensis LMG 19424]
          Length = 276

 Score =  201 bits (511), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 82/263 (31%), Positives = 130/263 (49%), Gaps = 6/263 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENN-----PDIICLQETKTEDKNFPFETLQSLNYHIE 58
           + +A+WNVNS++ R+  +  W+ E        D +CLQE K  D  +P   L++  +H  
Sbjct: 12  LRIASWNVNSLKVRLPQVLQWLAEQEQAGAPIDALCLQELKLPDDKYPLAELENAGFHSI 71

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
             GQK+YNGVAIL++   +     +  +    +              LR+   Y P+G  
Sbjct: 72  YTGQKTYNGVAILARDASMPGPVDVVRNIPGFEDAQQRVIAATYGD-LRLVCAYFPNGQS 130

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
           + S K+  K+ W++    +  + +     L   GD+NI P+  D ++P  WE     +  
Sbjct: 131 LDSDKFAYKLQWLEAMTAWLREEMARHPRLALLGDFNIAPEDRDVHDPAKWEGQNLVSPP 190

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
            R +F  L  +G  DA R        +S+WDY   ++ +N G+RIDHI+LSP       +
Sbjct: 191 ERAAFAALLELGLADAFRKFEQPEKAFSWWDYRMLAFRRNAGLRIDHILLSPALAEQCTA 250

Query: 239 ARIDTKPRGWTKPSDHTPVIVSL 261
             ID  PR W +PSDHTPV+ +L
Sbjct: 251 CVIDRVPRTWEQPSDHTPVVATL 273


>gi|262381739|ref|ZP_06074877.1| exodeoxyribonuclease III [Bacteroides sp. 2_1_33B]
 gi|262296916|gb|EEY84846.1| exodeoxyribonuclease III [Bacteroides sp. 2_1_33B]
          Length = 253

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 82/262 (31%), Positives = 137/262 (52%), Gaps = 12/262 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60
           + + T+N N +RA +   L  W+ +  PD++C+QETK +   FP ET ++L Y  ++ + 
Sbjct: 1   MKIITYNTNGLRAAVGKGLPEWLAQEQPDVLCIQETKLQPDQFPSETFEALGYKSYLFSA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GVAIL+K +P  I   +  +  D + RF+ A F      + I ++Y P G    
Sbjct: 61  QKKGYSGVAILTKQEPDHIEYGMGIEKYDNEGRFLRADFG----DVSIVSVYHPSG-TSG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             + D K+ W++ F ++  +  +    LI  GDYNI  +P D ++PI    ++ F  E R
Sbjct: 116 DERQDFKMIWLEDFQKYVVELQKSRPNLILCGDYNICHEPIDIHDPIRNAKNSGFLPEER 175

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           +   +  + GFTD  R  +     Y++W Y  +S SKNKG RID+ M+S      + +A 
Sbjct: 176 EWMTRFLSAGFTDTFRFLNPDKQEYTWWSYRFNSRSKNKGWRIDYCMVSDNMKPKVKAAY 235

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I          SDH P ++ ++
Sbjct: 236 ILNDA----VHSDHCPAVLEIE 253


>gi|153806611|ref|ZP_01959279.1| hypothetical protein BACCAC_00881 [Bacteroides caccae ATCC 43185]
 gi|149131288|gb|EDM22494.1| hypothetical protein BACCAC_00881 [Bacteroides caccae ATCC 43185]
          Length = 263

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 83/263 (31%), Positives = 139/263 (52%), Gaps = 12/263 (4%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59
           ++ + T+NVN +RA +   L  W+++ NPDI+CLQETK +   +P E  ++L Y  ++ +
Sbjct: 1   MMKIITYNVNGLRAAVSKGLPEWLEQENPDILCLQETKLQPDQYPVEVFEALGYKSYLYS 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GVA+L+K +P  +   +  +  D + RFI A F      L + ++Y P G   
Sbjct: 61  AQKKGYSGVALLTKQEPDHVEYGMGMEAYDNEGRFIRADFG----DLSVVSVYHPSG-TS 115

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +   K+ W++ F ++  +  +    LI  GDYNI  +P D ++P+    ++ F  E 
Sbjct: 116 GDERQAFKMVWLEDFQKYVLELQKSRPNLILCGDYNICHEPIDIHDPVRNAKNSGFLPEE 175

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R+   +    GF D+ R  +     Y++W Y  +S +KNKG RID+ M S     LL SA
Sbjct: 176 REWMTRFLAAGFIDSFRMLYPEKQEYTWWSYRFNSRAKNKGWRIDYCMASEPVRPLLMSA 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
           RI          SDH P+++ + 
Sbjct: 236 RILNDAM----HSDHCPMMLEIK 254


>gi|119469281|ref|ZP_01612220.1| exonuclease III [Alteromonadales bacterium TW-7]
 gi|119447145|gb|EAW28414.1| exonuclease III [Alteromonadales bacterium TW-7]
          Length = 268

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 76/267 (28%), Positives = 126/267 (47%), Gaps = 9/267 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V ++N+N +RAR+H L A I ++ PD+I LQE K  D+ FP + +Q + YH+   GQK
Sbjct: 1   MKVISFNINGLRARLHQLQAVIDKHQPDVIGLQEIKVHDEAFPLDDVQKMGYHVYFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHL-PGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121
           ++ GVA+L K +P  ++       +   +          N + + + N Y P G+ I   
Sbjct: 61  AHYGVAMLCKKEPKSVLKGFATDTEESQKRMISVTIEQDNGRDITVMNGYFPQGDNINHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175
           TK+  K  + K  +      L  ++ ++  GD NI P   D           +      F
Sbjct: 121 TKFPYKRQFYKDLMTHLDTNLTPDQDVVVMGDINISPTDLDIGIGEVNAKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E RQ    L + GF D  R  +   +  YS++DY +  +  N+G+RID ++ +     
Sbjct: 181 QPEERQWLSTLLDWGFKDTFRELYPDVNDQYSWFDYRSKGFLDNRGLRIDVVLATQSLAE 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261
               + ID + R   KPSDH P+  + 
Sbjct: 241 RCIDSGIDYELRAIDKPSDHAPIWSTF 267


>gi|134099932|ref|YP_001105593.1| AP endonuclease [Saccharopolyspora erythraea NRRL 2338]
 gi|291008673|ref|ZP_06566646.1| AP endonuclease [Saccharopolyspora erythraea NRRL 2338]
 gi|133912555|emb|CAM02668.1| AP endonuclease, family 1:exodeoxyribonuclease III xth
           [Saccharopolyspora erythraea NRRL 2338]
          Length = 265

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 68/265 (25%), Positives = 123/265 (46%), Gaps = 5/265 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+NS+ AR+  L  W+   +PD++C+QE K     FP   + +L Y +   G  
Sbjct: 1   MRIATWNLNSVTARLPRLLEWLSAASPDVLCVQELKCSSDMFPVAEVSALGYEVAAYGTG 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT-----INTQTLRIGNLYLPHGNP 118
            +NGV +LS+    E+   LPG+   +    +          ++   +R+ ++Y+P+G  
Sbjct: 61  RWNGVGVLSRVGLDEVRRGLPGEPGYLPEGAMFEVNEPRAIGVSCAGVRLWSVYVPNGRY 120

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
           +    YD K+ +++      +   +        GD+NI P   D ++   +      T  
Sbjct: 121 VGHPHYDYKLRFLEALRDTVAAERDHGRAFAVLGDFNIAPADDDVWDISAFAESTHVTEP 180

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
            R +   L+  G  D           +++WDY A ++ KN G+RID     P  T  +  
Sbjct: 181 ERSALADLRAAGLADVYPRALKYDVPFTYWDYRAGAFPKNMGMRIDLAYGDPRFTGAVSD 240

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263
           + +D + R     SDH P+++ LD+
Sbjct: 241 SYVDREARKGKGASDHAPLVIDLDL 265


>gi|110633439|ref|YP_673647.1| exodeoxyribonuclease III [Mesorhizobium sp. BNC1]
 gi|110284423|gb|ABG62482.1| Exodeoxyribonuclease III [Chelativorans sp. BNC1]
          Length = 259

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 85/260 (32%), Positives = 136/260 (52%), Gaps = 3/260 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+N+N+I  R+ NL  W+  + PD++CLQE K  D  FP   ++S  Y     GQK
Sbjct: 1   MKIATFNINNINKRLPNLLEWLHLSKPDVVCLQELKATDDAFPKSAIESFGYRAVWKGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           S+NGVAILS+     +            A           + + I ++Y P+GNP    K
Sbjct: 61  SWNGVAILSRVGEPVLTR---TRLPGDAADTQARYIEAAVRGVLIASIYAPNGNPQPGPK 117

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +D K++W++R  + A+   +   P++ AGD+N+ P   D Y    W ++A    E R +F
Sbjct: 118 FDYKLAWLERLRKHATALRKTGAPIVLAGDFNVAPTDIDIYPTKSWGDNALIQPESRAAF 177

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           ++L    +TD IR  H    +Y+FWDY    W ++ G+R+DH++LS      +  A +D 
Sbjct: 178 RRLLGRSWTDGIRLLHPEQRIYTFWDYKRLRWQRDAGLRLDHLLLSENLRGAIVKAGVDR 237

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
             RG    SDH P  + L++
Sbjct: 238 DVRGREGASDHAPAWIELNL 257


>gi|126208451|ref|YP_001053676.1| exonuclease III [Actinobacillus pleuropneumoniae L20]
 gi|303251086|ref|ZP_07337272.1| exonuclease III [Actinobacillus pleuropneumoniae serovar 6 str.
           Femo]
 gi|303253573|ref|ZP_07339711.1| exonuclease III [Actinobacillus pleuropneumoniae serovar 2 str.
           4226]
 gi|126097243|gb|ABN74071.1| exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar
           5b str. L20]
 gi|302647493|gb|EFL77711.1| exonuclease III [Actinobacillus pleuropneumoniae serovar 2 str.
           4226]
 gi|302650096|gb|EFL80266.1| exonuclease III [Actinobacillus pleuropneumoniae serovar 6 str.
           Femo]
          Length = 267

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 80/267 (29%), Positives = 128/267 (47%), Gaps = 8/267 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A I+++ PD++ LQE K  D++FP++ +  L YH+   GQK
Sbjct: 1   MKFISFNINGLRARPHQLEAIIEKHQPDVLGLQEIKVADEDFPWDLVNHLGYHVFHHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122
            + GVA+L+K +P+ +    P D+ D Q R I A        L + N Y P G   +  T
Sbjct: 61  GHYGVALLTKKEPLAVRKGFPTDNADAQKRMIMADIETEFGVLTVLNGYFPQGENRSHET 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  +      +    L  E P++  GD NI P               + +    F 
Sbjct: 121 KFPAKEKFYADLQHYLESELSPENPIVIMGDMNISPTDLDIGIGEPNRKRWLRDGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+   +L + G  D  RA +   +  +S++DY +  +  N+G+RID ++ S      
Sbjct: 181 PEEREWLDRLYSYGLIDTFRAMNPQANDKFSWFDYRSKGFDDNRGLRIDLVLASKGLAER 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262
                ID + R   KPSDH+PV     
Sbjct: 241 CVETGIDLEIRAMEKPSDHSPVWAVFK 267


>gi|292488442|ref|YP_003531324.1| exonuclease III [Erwinia amylovora CFBP1430]
 gi|291553871|emb|CBA20916.1| Exonuclease III [Erwinia amylovora CFBP1430]
          Length = 301

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 82/266 (30%), Positives = 123/266 (46%), Gaps = 8/266 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A ++++ PD+I LQETK  D  FP   + SL YH+   GQK
Sbjct: 34  MKFVSFNINGLRARPHQLQAIVEQHQPDVIGLQETKVHDDMFPLAEVASLGYHVFYHGQK 93

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122
            + GVA+L K QP+ +      DD D Q R I A     +  L + N Y P G       
Sbjct: 94  GHYGVALLCKQQPVAVRRGFASDDEDAQRRIIMADIMTPSGLLTVINGYFPQGESRDHPT 153

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  + +    +  Q+ + +  L+  GD NI           +     +      F 
Sbjct: 154 KFPAKEKFYRDLHSYLEQQQKPDNQLLIMGDMNISSGDLDIGIGEENRKRWLRTGKCSFL 213

Query: 177 LEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+   KL N G  D  RA H   +  +S++DY +  +  N+G+RID ++ S      
Sbjct: 214 PEEREWMDKLMNWGLVDTWRAQHATINDRFSWFDYRSKGFDDNRGLRIDLVLASRPLADR 273

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
             +  ID   R   KPSDH P+    
Sbjct: 274 CVATGIDYDIRAMEKPSDHAPIWAEF 299


>gi|127513190|ref|YP_001094387.1| exonuclease III [Shewanella loihica PV-4]
 gi|126638485|gb|ABO24128.1| Exodeoxyribonuclease III [Shewanella loihica PV-4]
          Length = 269

 Score =  201 bits (511), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 89/264 (33%), Positives = 134/264 (50%), Gaps = 9/264 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +RAR+H L A I  ++PDII LQETK  D+ FP   ++++ Y +   G K
Sbjct: 1   MKIVSFNINGLRARLHQLQALIDSHSPDIIGLQETKVHDEAFPLAEVEAMGYQVHYHGGK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT-INTQTLRIGNLYLPHGNPITS- 121
           ++ GVA+LSK  P+++    P DD + Q R I  TFT  N + L + N Y P G  I+  
Sbjct: 61  AHYGVAMLSKLPPVKVQKGFPTDDDEAQRRMIMGTFTQANGRQLTVLNGYFPQGENISHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175
           TKY  K  + +  + +  Q    +E +   GD NI P   D           +      F
Sbjct: 121 TKYPAKRKFYQDLMHYLQQHHSPDEDIAIIGDINISPIDLDIGIGEVNAKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R+  Q L + G  D  R  H      YS++DY +  +  N+G+RID I+ +P    
Sbjct: 181 QPEEREWLQTLLDWGLVDTFRQLHPTRSERYSWFDYRSKGFDDNRGLRIDVILATPSLAE 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVI 258
            L  + +D   RG  KPSDH P+ 
Sbjct: 241 RLTESDVDYDLRGIDKPSDHAPIW 264


>gi|59801894|ref|YP_208606.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae FA 1090]
 gi|59718789|gb|AAW90194.1| putative exodeoxyribonuclease III [Neisseria gonorrhoeae FA 1090]
          Length = 256

 Score =  201 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 91/260 (35%), Positives = 136/260 (52%), Gaps = 4/260 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + TWNVNS+  R+  +   + +N PDI+ LQE K +   FP   LQ + +H    GQK
Sbjct: 1   MKITTWNVNSLNVRLPQVQNLLVDNPPDILVLQELKLDQDKFPAAALQMMGWHCVWSGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAI+S+  P ++   LP    D Q R I AT       +R+ N+Y  +G  + S K
Sbjct: 61  TYNGVAIVSRSVPQDVHFGLPSLPDDPQRRVIAATVGG----VRVINVYCVNGEALDSPK 116

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K  W      F    +     L+  GD+NI P   DCY+P  W      +   RQ F
Sbjct: 117 FKYKEQWFAALTEFVRDEMSRHGKLVLLGDFNIAPADADCYDPEKWYEKIHCSSVERQWF 176

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q L ++G TD++R  H     Y+++DY    + +  G+RIDHI+++ E  ++L   RID 
Sbjct: 177 QNLLDLGLTDSLRQVHPEGAFYTWFDYRGAMFQRKLGLRIDHILVTSEMAAVLKDVRIDL 236

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
           + R   +PSDH PV    D+
Sbjct: 237 ETRALERPSDHAPVAAEFDL 256


>gi|313499091|gb|ADR60457.1| Exonuclease III [Pseudomonas putida BIRD-1]
          Length = 270

 Score =  201 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 85/269 (31%), Positives = 133/269 (49%), Gaps = 11/269 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +  +N+N +RAR H LAA I+++ PD+I LQETK  D  FP   +Q+L YH+   GQK
Sbjct: 1   MKIVCFNINGLRARPHQLAALIEKHQPDVIGLQETKVSDDQFPLADVQALGYHVHYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122
            + GVA+LS+  P+ +      D+ D Q RFI  TF   +   + I N Y P G      
Sbjct: 61  GHYGVALLSRQAPLSLHKGFATDEEDAQRRFIWGTFADADGSPITIMNGYFPQGESRDHP 120

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175
            K+  K  +          +   ++P++  GD NI PQ        D     +      F
Sbjct: 121 TKFPAKQRFYSDLQALLESQFRNDQPVLVMGDMNISPQDCDIGIGPDNAKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232
             E R+  ++L+  G  D+ R  +      +S++DY +  +     +G+RID IM S + 
Sbjct: 181 LPEEREWMERLKGWGLVDSFRHLYPEVTDRFSWFDYRSRGFEDEPKRGLRIDLIMASQQL 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
              + +A +D + RG  KPSDH P+ + L
Sbjct: 241 VPRIKAAGVDYELRGMEKPSDHAPIWLEL 269


>gi|212634722|ref|YP_002311247.1| exonuclease III [Shewanella piezotolerans WP3]
 gi|212556206|gb|ACJ28660.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Shewanella
           piezotolerans WP3]
          Length = 268

 Score =  201 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 78/264 (29%), Positives = 131/264 (49%), Gaps = 9/264 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +RAR+H L A I  + PD+I LQETK  D+ FP   ++++ Y +   G K
Sbjct: 1   MKIVSFNINGLRARLHQLQALIDSHQPDVIGLQETKVHDEAFPLADVEAMGYKVHYHGGK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLD-VQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121
           ++ GVA+LSK +P+++    P D+ D  +   +      N + L + N Y P G+ I+  
Sbjct: 61  AHYGVAMLSKAEPLKVQKGFPTDEEDAQRRMIMGTFMQENGRQLTVLNGYFPQGDNISHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175
           TKY  K  + K  + + ++    +E +   GD NI P               +      F
Sbjct: 121 TKYPAKRKFYKDLMVYLNEHHSADEDIAIIGDINISPVDLDIGIGEPNAKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R+  + L + G  D  R  H      YS++DY +  +  N+G+RID ++ +    +
Sbjct: 181 QPEEREWLKTLMDWGLVDTFRQLHPTRTERYSWFDYRSKGFVDNRGLRIDVVLATKSLAA 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVI 258
            L  + +D   RG  KPSDH P+ 
Sbjct: 241 RLVESDVDYDLRGIEKPSDHAPIW 264


>gi|254498807|ref|ZP_05111518.1| conserved hypothetical protein [Legionella drancourtii LLAP12]
 gi|254351971|gb|EET10795.1| conserved hypothetical protein [Legionella drancourtii LLAP12]
          Length = 265

 Score =  201 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 90/261 (34%), Positives = 151/261 (57%), Gaps = 5/261 (1%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           V  +A+WNVNS++ R+  + AW++ +  D++ LQETK  D+NFP        YHI   GQ
Sbjct: 8   VFKLASWNVNSLKIRLDQVLAWMETSQMDVLALQETKLLDENFPAAAFIEKGYHIVYSGQ 67

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K+YNGVAI+S+Y   +++T +P      +         +    +R+ +LY+P+G+ +TS 
Sbjct: 68  KTYNGVAIISRYPITDVMTDVPDLADPQRRIL-----AVTVAGIRLIDLYVPNGSELTSD 122

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           KY  K+ W+++   F  Q++ +   +   GD+NI P+  D ++P+ W++    +   R++
Sbjct: 123 KYQYKLHWLQKVTAFIQQQMSIYPKVAVVGDFNIAPEDRDVHDPLEWQDSVLVSPPEREA 182

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F  L  +G  D+ R        +S+WDY A  + +N+G+RIDH++LS E   L   + ID
Sbjct: 183 FAALLQLGLYDSFRNFVQAEQSFSWWDYRAAGFRRNRGLRIDHVLLSQELNVLCRQSCID 242

Query: 243 TKPRGWTKPSDHTPVIVSLDI 263
            +PR   +PSDH PV V L++
Sbjct: 243 VEPRKTERPSDHAPVWVELEL 263


>gi|26989609|ref|NP_745034.1| exonuclease III [Pseudomonas putida KT2440]
 gi|24984490|gb|AAN68498.1|AE016481_14 exodeoxyribonuclease III [Pseudomonas putida KT2440]
          Length = 270

 Score =  201 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 86/269 (31%), Positives = 133/269 (49%), Gaps = 11/269 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +  +N+N +RAR H LAA I+++ PD+I LQETK  D  FP   +Q+L YH+   GQK
Sbjct: 1   MKIVCFNINGLRARPHQLAALIEKHQPDVIGLQETKVSDDQFPLADVQALGYHVHYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122
            + GVA+LS+  P+ +      D+ D Q RFI  TF   N   + I N Y P G      
Sbjct: 61  GHYGVALLSRQPPLSLHKGFATDEEDAQRRFIWGTFADANGSPITIMNGYFPQGESRDHP 120

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175
            K+  K  +          +   ++P++  GD NI PQ        D     +      F
Sbjct: 121 TKFPAKQRFYSDLQALLESQFRNDQPVLVMGDMNISPQDCDIGIGPDNAKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232
             E R+  ++L+  G  D+ R  +      +S++DY +  +     +G+RID IM S + 
Sbjct: 181 LPEEREWMERLKGWGLVDSFRHLYPDVTDRFSWFDYRSRGFEDEPKRGLRIDLIMASQQL 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
              + +A +D + RG  KPSDH P+ + L
Sbjct: 241 VPRIKAAGVDYELRGMEKPSDHAPIWLEL 269


>gi|120598407|ref|YP_962981.1| exonuclease III [Shewanella sp. W3-18-1]
 gi|146293514|ref|YP_001183938.1| exonuclease III [Shewanella putrefaciens CN-32]
 gi|120558500|gb|ABM24427.1| Exodeoxyribonuclease III [Shewanella sp. W3-18-1]
 gi|145565204|gb|ABP76139.1| Exodeoxyribonuclease III [Shewanella putrefaciens CN-32]
          Length = 270

 Score =  201 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 87/268 (32%), Positives = 131/268 (48%), Gaps = 9/268 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +R+R+H L A I  + PDII LQETK  D+ FP   ++++ Y +   G K
Sbjct: 1   MKIVSFNINGLRSRLHQLQALIDSHKPDIIGLQETKVHDEAFPLAEVEAMGYQVHYHGGK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122
           ++ GVA+LSK  P +I    P DD D Q R I  TF   N + L + N Y P G  I   
Sbjct: 61  AHYGVAMLSKVAPQKIQKGFPSDDEDAQRRMIIGTFSQANGRPLTVFNGYFPQGESIDHP 120

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175
            KY  K  + +  + +       +E +   GD NI P   D           +      F
Sbjct: 121 TKYPAKRKFYQDLMHYLQTNHSNDEDIAIIGDINISPTDLDIGIGEVNRKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R+  + LQ+ G  D  R  H      YS++DY +  +  N+G+RID I+ +P   +
Sbjct: 181 QPEEREWLKTLQDWGLIDTFRQLHPERTERYSWFDYRSKGFDDNRGLRIDVILATPSLAA 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
            L  + +D   RG  KPSDH P+  +  
Sbjct: 241 RLVESDVDYDLRGIDKPSDHAPIWSTFK 268


>gi|251792404|ref|YP_003007130.1| exonuclease III [Aggregatibacter aphrophilus NJ8700]
 gi|247533797|gb|ACS97043.1| exodeoxyribonuclease III [Aggregatibacter aphrophilus NJ8700]
          Length = 267

 Score =  201 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 81/267 (30%), Positives = 121/267 (45%), Gaps = 8/267 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V ++N+N +RAR H L   I +  PD++ LQE K  D+ FP+E +  L YH+   GQK
Sbjct: 1   MKVMSFNINGLRARPHQLEEIIDKYQPDVLGLQEIKVADEVFPYELVDHLGYHVNHYGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122
            + GVA+LSK  P+ +    P D  + Q R I          L + N Y P G       
Sbjct: 61  GHYGVALLSKQAPLSVKKGFPTDGEEAQKRIIMIDLETPFGQLTVINGYFPQGESRKHPT 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  +     R+  Q    E P+I  GD NI P         +     +      F 
Sbjct: 121 KFPAKQKFYADLQRYLEQEHNAENPVIIMGDMNISPSDLDIGIGDENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+ +Q+L   G  D  R  + T +  +S++DY +  +  N+G+RIDHI+ +    + 
Sbjct: 181 PEEREWYQRLYAYGLEDTFRYMNPTVNDKFSWFDYRSKGFDDNRGLRIDHILANKALVAH 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262
                I    R   KPSDH P+     
Sbjct: 241 CVDTGIALDIRAMEKPSDHAPIWAEFK 267


>gi|213961670|ref|ZP_03389936.1| exodeoxyribonuclease III [Capnocytophaga sputigena Capno]
 gi|213955459|gb|EEB66775.1| exodeoxyribonuclease III [Capnocytophaga sputigena Capno]
          Length = 254

 Score =  201 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 82/262 (31%), Positives = 131/262 (50%), Gaps = 14/262 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY---HIET 59
           + + ++NVN IRA +    A W+K  NPD++CLQE K  +   P E    L Y   +  +
Sbjct: 1   MKIISYNVNGIRAALTKGFADWLKSANPDVLCLQEIKALEDQIPTEIFTELGYTYQYYHS 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GVAILSK  P  +      D +D + R + A F      L + +LYLP G  I
Sbjct: 61  AEKKGYSGVAILSKIAPKHVEVGTGIDYMDKEGRVLRADFET----LSVMSLYLPSGTNI 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                D K++++  F ++  +  +    L+  GDYNI  +  D ++P+     + F    
Sbjct: 117 DR--LDFKLTFMADFQKYIDKLKQTVPNLVICGDYNICHEAIDIHDPVRNATVSGFLPVE 174

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R+   K    GF D+ R  H   H YS+W Y A++ + NKG RID+ ++S    + +  A
Sbjct: 175 REWLDKFMKSGFIDSFRYFHKEPHQYSWWSYRANARNNNKGWRIDYHLVSTPLENRMERA 234

Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261
            I  +     K SDH P+++ +
Sbjct: 235 LILPEA----KHSDHCPIVLEI 252


>gi|294670922|ref|ZP_06735778.1| hypothetical protein NEIELOOT_02626 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291307409|gb|EFE48652.1| hypothetical protein NEIELOOT_02626 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 261

 Score =  201 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 95/258 (36%), Positives = 135/258 (52%), Gaps = 4/258 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+  R+  +  W+ ++ PDI+ LQE K +   FP   LQ + +H    GQK
Sbjct: 1   MKIATWNVNSLNVRLPQVQNWLADHRPDILALQELKLDQDKFPAAALQMMGWHSVWSGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAI+S+ +P ++ T LP    D Q R I AT       +RI N+Y  +G  + S K
Sbjct: 61  TYNGVAIISRGEPQDVHTGLPTLPDDPQRRVIAATVNG----VRIVNVYCVNGEALDSPK 116

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K  W      F    L   E LI  GD+NI P   DCY P  W      +   RQ F
Sbjct: 117 FQYKEQWFAALTEFLRNELSRHEKLILLGDFNIAPADADCYAPEKWHEKILCSSIERQWF 176

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q L ++G TD++R  H     Y+++DY    + + +G+RIDHI+ S    S L   ++D 
Sbjct: 177 QNLLDLGLTDSLRQIHPEGAFYTWFDYRGAMFQRKQGLRIDHILTSRTMASALQDMQVDY 236

Query: 244 KPRGWTKPSDHTPVIVSL 261
             R   +PSDH PV    
Sbjct: 237 DTRALERPSDHAPVWAQF 254


>gi|319408771|emb|CBI82428.1| exodeoxyribonuclease III [Bartonella schoenbuchensis R1]
          Length = 263

 Score =  201 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 131/259 (50%), Positives = 177/259 (68%), Gaps = 1/259 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+  I+AR   L  W+++N PDI+CLQE K  D NFP + +++L YHIET GQK
Sbjct: 1   MKIATWNIAGIKARHDTLCKWLQKNQPDIVCLQEIKCIDANFPRDEIETLGYHIETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           S+NGVA+LSK +P E++  LPGDD D QAR+IEA ++ N   +R+ +LYLP+GNPI S K
Sbjct: 61  SFNGVALLSKKRPDELIRQLPGDDNDEQARYIEAVYSTNKGVVRVASLYLPNGNPINSEK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W++R    A   L  E+PLI AGDYN+IP P D   P  W+NDA F  + RQ+F
Sbjct: 121 HLYKMRWMERLYTHAKSLLAYEDPLILAGDYNVIPTPLDAKKPEEWKNDALFLPQTRQAF 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q++  +GF D+IR   D    +SFWD+ A +W KN GIRIDH++LSPEA   L  A   T
Sbjct: 181 QRIIYLGFYDSIRNVTD-DSSFSFWDFQAGAWRKNNGIRIDHLLLSPEAADQLVCAYSQT 239

Query: 244 KPRGWTKPSDHTPVIVSLD 262
           + RG+ KPSDH PV + L+
Sbjct: 240 EVRGYEKPSDHVPVWIELN 258


>gi|322514720|ref|ZP_08067746.1| exodeoxyribonuclease III [Actinobacillus ureae ATCC 25976]
 gi|322119315|gb|EFX91431.1| exodeoxyribonuclease III [Actinobacillus ureae ATCC 25976]
          Length = 305

 Score =  201 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 82/267 (30%), Positives = 125/267 (46%), Gaps = 8/267 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A I+++ PD+I LQE K  D++FP++ +  L YH+   GQK
Sbjct: 39  MKFISFNINGLRARPHQLEALIEKHQPDVIGLQEIKVADEDFPWDLVNHLGYHVFHHGQK 98

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122
            + GVA+L+K +P+ +    P DD D Q R I A        L + N Y P G      T
Sbjct: 99  GHYGVALLTKKEPLAVRKGFPTDDADAQKRMIMADIETEFGVLTVLNGYFPQGENRAHET 158

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  +      +    L  E P++  GD NI P               + +    F 
Sbjct: 159 KFPAKEKFYADLQHYLETELTPENPIVIMGDMNISPTDLDIGIGEPNRKRWLRDGKCSFL 218

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+   +L N G  D  R  +   +  +S++DY +  +  N+G+RID ++ S      
Sbjct: 219 PEEREWLDRLYNYGLVDTFRVMNPQANDKFSWFDYRSKGFDDNRGLRIDLVLASKGLAGH 278

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262
                ID + R   KPSDH PV     
Sbjct: 279 CVETGIDLEIRAMEKPSDHAPVWAVFK 305


>gi|49474410|ref|YP_032452.1| exodeoxyribonuclease III [Bartonella quintana str. Toulouse]
 gi|49239914|emb|CAF26312.1| Exodeoxyribonuclease III [Bartonella quintana str. Toulouse]
          Length = 260

 Score =  201 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 131/259 (50%), Positives = 177/259 (68%), Gaps = 1/259 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+  I+AR   L  W+++N PDI+CLQE K+ D+NFP + ++SL YHIET GQK
Sbjct: 1   MKIATWNIAGIKARHETLYQWLQQNQPDIVCLQEIKSTDENFPCDAIESLGYHIETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           S+NGVAILSK  P E++  LPG++ D Q R+IEA ++ N   +R+ +LYLP+GNP+ S K
Sbjct: 61  SFNGVAILSKKTPDEVIRRLPGNNNDEQTRYIEAVYSTNKGVIRVASLYLPNGNPVKSEK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W++R    A   L  EEPL+ AGDYN+IP P D  NP  W NDA F  + R +F
Sbjct: 121 YSYKMEWMERLYAHAKSLLAYEEPLVLAGDYNVIPTPLDAKNPQKWSNDALFLPQTRNAF 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q++ ++GF DAIR   DT   +SFWD+ A +W KN GIRIDH++LSPEA   L  A   T
Sbjct: 181 QRIVHLGFYDAIRNVTDTP-SFSFWDFQAGAWHKNNGIRIDHLLLSPEAVDQLICAYSQT 239

Query: 244 KPRGWTKPSDHTPVIVSLD 262
           + RG+ K SDH PV + L+
Sbjct: 240 EVRGYPKSSDHAPVWIDLN 258


>gi|255013539|ref|ZP_05285665.1| exodeoxyribonuclease [Bacteroides sp. 2_1_7]
          Length = 253

 Score =  201 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 81/260 (31%), Positives = 135/260 (51%), Gaps = 12/260 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60
           + + T+N N +RA +   L  W+ +  PD++C+QETK +   FP ET ++L Y  ++ + 
Sbjct: 1   MKIITYNTNGLRAAVGKGLPEWLAQEQPDVLCIQETKLQPDQFPAETFEALGYKSYLFSA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GVAIL+K +P  +   +  +  D + RFI A F      L + ++Y P G    
Sbjct: 61  QKKGYSGVAILTKQEPDHVEYGMGIERYDNEGRFIRADFG----DLSVVSVYHPSG-TSG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             + D K+ W++ F ++  +  +    LI  GDYNI  +P D ++PI    ++ F  E R
Sbjct: 116 DERQDFKMVWLEDFQKYVVELQKSRPNLILCGDYNICHEPIDIHDPIRNAKNSGFLPEER 175

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           +   +  + GF D  R  +     Y++W Y  +S +KNKG RID+ M+S    S + +A 
Sbjct: 176 EWMTRFLSAGFIDTFRLLNPEKQEYTWWSYRFNSRAKNKGWRIDYCMVSEAMKSRVKAAY 235

Query: 241 IDTKPRGWTKPSDHTPVIVS 260
           I          SDH P ++ 
Sbjct: 236 ILNDA----VHSDHCPAVLE 251


>gi|240850841|ref|YP_002972241.1| exodeoxyribonuclease III [Bartonella grahamii as4aup]
 gi|240267964|gb|ACS51552.1| exodeoxyribonuclease III [Bartonella grahamii as4aup]
          Length = 260

 Score =  201 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 134/260 (51%), Positives = 176/260 (67%), Gaps = 1/260 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+  I+AR   L  W++++ PDI+CLQE K+ D+NFP + +++L YHIET GQK
Sbjct: 1   MKIATWNIAGIKARHETLCQWLQQSQPDIVCLQEIKSIDENFPRDAIENLGYHIETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           S+NGVAILSK  P E++  LPG+D D Q R+IEA ++ N   +R+ +LYLP+GNPI S K
Sbjct: 61  SFNGVAILSKKTPDEVIRRLPGNDNDEQTRYIEAVYSTNKGVVRVASLYLPNGNPIESEK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  KI W++R    A   L  EEPLI AGDYN+IP P D   P  W  DA F  E R+ F
Sbjct: 121 YSYKIEWMERLYTHAKSLLAYEEPLILAGDYNVIPAPLDAKKPQEWYQDALFLQETRKVF 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q++ N+G  DAIR   DT   +SFWD+ A +W KN GIRIDH++LSPEA   L  A   T
Sbjct: 181 QRILNLGLYDAIRNVTDTP-SFSFWDFQAGAWPKNNGIRIDHLLLSPEAVDQLICAHSQT 239

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
           + RG+ KPSDH PV + L+I
Sbjct: 240 EVRGYQKPSDHVPVWIHLNI 259


>gi|116873216|ref|YP_849997.1| exodeoxyribonuclease III [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|116742094|emb|CAK21218.1| exodeoxyribonuclease III [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 251

 Score =  201 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 67/262 (25%), Positives = 121/262 (46%), Gaps = 13/262 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      + +E + DI CLQETK ++     + L++   +     +
Sbjct: 1   MKLISWNVNGLRAAVKKGFLEYFEEVDADIFCLQETKLQEGQIELD-LKAYKDYWNYAVK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +P+ +   L   + D + R I   F                 +     
Sbjct: 60  KGYSGTAIFTKVEPLSVQYGLGIPEHDTEGRVITLEFEAF-----FMVTVYTPNSQAELK 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           + D ++++    L +    L+  +P++  GD N+  +  D  NP     +A F+ E R  
Sbjct: 115 RLDYRMTFEDAILEYIKN-LDKTKPVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F    + GF D+ R  +      YS+W Y  ++ ++N G RID+ ++S      L  A+I
Sbjct: 174 FSAFLDAGFIDSFRYFYPDLTDAYSWWSYRMNARARNTGWRIDYFVVSKRLKDKLVDAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
            ++  G    SDH PV + L++
Sbjct: 234 HSEVLG----SDHCPVELELNL 251


>gi|167624545|ref|YP_001674839.1| exonuclease III [Shewanella halifaxensis HAW-EB4]
 gi|167354567|gb|ABZ77180.1| exodeoxyribonuclease III [Shewanella halifaxensis HAW-EB4]
          Length = 268

 Score =  201 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 82/264 (31%), Positives = 133/264 (50%), Gaps = 9/264 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +RAR+H L A I  + PDII LQETK  D+ FP   ++++ YH+   G K
Sbjct: 1   MKIVSFNINGLRARLHQLQALIDTHQPDIIGLQETKVHDEAFPLADVEAMGYHVHYHGGK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLD-VQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121
           ++ GVA+LSK +PI++    P D+ D  +   +      N + L + N Y P G+ I+  
Sbjct: 61  AHYGVAMLSKAEPIKVQKGFPTDEEDAQRRMIMGTFMQENGRPLTVINGYFPQGDNISHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175
           TKY  K  + K  +++ ++    +E +   GD NI P               +      F
Sbjct: 121 TKYPAKRKFYKDLMQYLNEYHSADEDIAIIGDINISPVDLDIGIGEPNAKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R+  + L + G  D  R  H      YS++DY +  +  N+G+RID I+ +     
Sbjct: 181 QPEEREWLKTLMDWGLVDTFRELHPTRSERYSWFDYRSKGFVDNRGLRIDVILATKSLAQ 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVI 258
            L  + +D + RG  KPSDH P+ 
Sbjct: 241 HLTESDVDYELRGIEKPSDHAPIW 264


>gi|71279793|ref|YP_269869.1| exonuclease III [Colwellia psychrerythraea 34H]
 gi|71145533|gb|AAZ26006.1| exodeoxyribonuclease III [Colwellia psychrerythraea 34H]
          Length = 268

 Score =  201 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 81/267 (30%), Positives = 131/267 (49%), Gaps = 9/267 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +RAR+H L A I ++ PDII LQE K  D+ FP E ++++ YH+   GQK
Sbjct: 1   MKIISFNINGLRARLHQLQAIIDKHQPDIIGLQEIKVHDEAFPLEAVEAMGYHVYFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLD-VQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121
           ++ GVA+L K +   +    P DD +  +   +  T     + + + N Y P G  I+  
Sbjct: 61  AHYGVAMLCKKEAESVQRGFPTDDDEAQRRMIMVTTTNDKGEKVTVLNGYFPQGENISHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW------ENDACF 175
           TKY  K  + K  + + +     +E ++  GD NI PQ  D     +            F
Sbjct: 121 TKYPYKRKFYKDLMTYLNDNHVNDENVVVMGDINISPQDLDIGIGDVNSKRWLKSGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R+   +L + GF D  R  H      YS++DY +  +  N+G+RID ++ +     
Sbjct: 181 QPEEREWLTRLMDWGFVDTFRQLHPDTTERYSWFDYRSRGFDDNRGLRIDVVLATKNMAE 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261
               A ID + R   KPSDH P+  + 
Sbjct: 241 QCIEADIDYELRAIEKPSDHAPIWSTF 267


>gi|73540991|ref|YP_295511.1| exodeoxyribonuclease III [Ralstonia eutropha JMP134]
 gi|72118404|gb|AAZ60667.1| Exodeoxyribonuclease III [Ralstonia eutropha JMP134]
          Length = 275

 Score =  201 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 84/264 (31%), Positives = 132/264 (50%), Gaps = 6/264 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENN-----PDIICLQETKTEDKNFPFETLQSLNYHIE 58
           + +A+WNVNS++ R+  +  W+ E        D +CLQE K  D  +P   L++  +H  
Sbjct: 11  LRIASWNVNSLKVRLPQVLQWLTEQEQAGAPIDALCLQELKLPDDKYPLAELENAGFHSV 70

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
             GQK+YNGVAIL++   +     +  +    +              +R+   Y P+G  
Sbjct: 71  YTGQKTYNGVAILARDASMPGPVDVVRNIPGFEDAQQRVVAATYGD-IRLVCAYFPNGQA 129

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
             S K+  K+ W+     +  + L     L   GD+NI P+  D ++P  WE     + +
Sbjct: 130 PDSDKFVYKLKWLDAMTAWLREELAKYPRLALLGDFNIAPEDRDVHDPAKWEGQNLVSPQ 189

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
            R +F  L  +G  DA R        +S+WDY   ++ +N G+RIDHI+LSPE  S   +
Sbjct: 190 ERAAFTALVELGLADAFRKFEQPEKAFSWWDYRMFAFRRNAGLRIDHILLSPELASSCSA 249

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
             ID  PR W +PSDHTPV+ +L+
Sbjct: 250 CVIDRAPRTWEQPSDHTPVVATLN 273


>gi|283833419|ref|ZP_06353160.1| exodeoxyribonuclease III [Citrobacter youngae ATCC 29220]
 gi|291071073|gb|EFE09182.1| exodeoxyribonuclease III [Citrobacter youngae ATCC 29220]
          Length = 268

 Score =  201 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 79/268 (29%), Positives = 125/268 (46%), Gaps = 8/268 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H LAA ++++ PD+I LQETK  D  FP E +  L Y++   GQK
Sbjct: 1   MKFVSFNINGLRARPHQLAAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122
            + GVA+L+K  PI +    P D  + Q R I A       ++ + N Y P G      T
Sbjct: 61  GHYGVALLTKETPIAVRRGFPNDGEEAQRRIIMAEIPSPLGSITVINGYFPQGESRDHET 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K ++ +    +    L+ + P++  GD NI P         +     +      F 
Sbjct: 121 KFPAKAAFYQNLQNYLETELKRDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+  ++L   G  D  R         +S++DY +  +  N+G+RID ++ S      
Sbjct: 181 PEEREWMERLLGWGLVDTYRHAWPEKNDQFSWFDYRSKGFDDNRGLRIDLLLASNPLAER 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                ID + R   KPSDH PV     +
Sbjct: 241 CEETGIDYEIRSMEKPSDHAPVWAKFRV 268


>gi|291165919|gb|EFE27966.1| exodeoxyribonuclease III [Filifactor alocis ATCC 35896]
          Length = 251

 Score =  201 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 73/262 (27%), Positives = 113/262 (43%), Gaps = 13/262 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN IRA +      + KE + DI CLQETK ++     E L+  + +     +
Sbjct: 1   MKLISWNVNGIRACVKKGFLDFFKETDADIFCLQETKLQEGQIELE-LEGYHQYWNYAER 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +P+ +   L  ++ D + R I   F                   +   
Sbjct: 60  KGYSGTAIFTKQEPLSVSYGLGIEEHDQEGRVITLEFDNFYMVTVYTPNSKNELLRLDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +   R    RL   +P+I  GD N+  Q  D  NP   + +A FT+E R  
Sbjct: 120 M------VWEDEFRSYLLRLNETKPVIVCGDLNVAHQEIDLKNPKTNQKNAGFTIEERTK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
              L + GF D  R  +      YS+W Y  ++   N G RID+ + S E    L  A+I
Sbjct: 174 MSTLLDSGFIDTFRFFYPELEGAYSWWSYRFNARKNNAGWRIDYFLTSQELKENLKDAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
            +   G    SDH PV + ++ 
Sbjct: 234 HSDILG----SDHCPVELDIEW 251


>gi|221134651|ref|ZP_03560954.1| exonuclease III [Glaciecola sp. HTCC2999]
          Length = 269

 Score =  201 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 84/267 (31%), Positives = 129/267 (48%), Gaps = 9/267 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N IRAR+H L A I  ++PD+I LQE K ++  FP   ++++ YH+   GQK
Sbjct: 1   MKIISFNINGIRARLHQLQALIDSHSPDVIGLQEIKVDNAQFPISDVEAMGYHVVYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT-FTINTQTLRIGNLYLPHGNPITST 122
           ++ GVA+L+K  PI +   LP D  + Q R I  T  T N + + I N Y P G  I   
Sbjct: 61  AHYGVAMLTKNPPISVQYGLPSDTDEHQKRLIAVTLPTNNGKDITIYNGYFPQGENIKHD 120

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175
            K+  K+ + +      +     ++ +I  GD NI P         D     +      F
Sbjct: 121 TKFPYKVDFYRDLTAHLAATHGPDDQVIVMGDINISPTDLDIGIGPDNAKRWLRSGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
               R     LQ +G+ D  R         YS++DY +  +  N+G+RID I+ S     
Sbjct: 181 QPIERDMLATLQALGYHDTFRCLTPEKTDRYSWFDYRSKGFVDNRGLRIDVILASTTLLP 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261
           L   + ID + RG  KPSDH P+    
Sbjct: 241 LCTESEIDYELRGIEKPSDHAPIFAVF 267


>gi|330446636|ref|ZP_08310288.1| exodeoxyribonuclease III [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328490827|dbj|GAA04785.1| exodeoxyribonuclease III [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 268

 Score =  201 bits (510), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 82/268 (30%), Positives = 132/268 (49%), Gaps = 9/268 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V ++N+N +RAR+H L A I+++ PD+I LQE K  D+ FP   ++++ Y +   GQK
Sbjct: 1   MKVISFNINGLRARLHQLQALIEKHQPDVIGLQEIKVHDEAFPLADVEAMGYKVYFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLD-VQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121
           ++ GVA+L K +PI +    P DD D  +   +      N + L + N Y P G+ ++  
Sbjct: 61  AHYGVAMLCKQEPISVQKGFPTDDEDAQRRMIMATFKQENGKDLTVMNGYFPQGDNVSHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175
           TK+  K  +    + + +     +E LI  GD NI P               +      F
Sbjct: 121 TKFPAKEKFYADLMNYLNTAHTNDEELIVMGDINISPIDLDIGIGPANAKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
               R+  Q L + GF D  R  H T    +S++DY +  +  N+G+RID I+ +P    
Sbjct: 181 QPIEREWLQTLLDWGFIDTFRQLHPTVDDKFSWFDYRSKGFVDNRGLRIDVILATPSLAE 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
               + ID + RG  KPSDH P+  +  
Sbjct: 241 RCVESDIDYELRGIEKPSDHAPIWSTFK 268


>gi|302541699|ref|ZP_07294041.1| exodeoxyribonuclease III [Streptomyces hygroscopicus ATCC 53653]
 gi|302459317|gb|EFL22410.1| exodeoxyribonuclease III [Streptomyces himastatinicus ATCC 53653]
          Length = 259

 Score =  200 bits (509), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 77/257 (29%), Positives = 128/257 (49%), Gaps = 1/257 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSI AR+  L AW++ +  D++C+QETK  +  FPFE L+ L Y        
Sbjct: 1   MRIATWNVNSITARLPRLLAWLESSGTDVLCVQETKCAEAAFPFEPLRELGYEAAVNATG 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVA+LS+    E+V+ LPG       +   A        +R+ ++Y+P+G  I    
Sbjct: 61  RWNGVAVLSRVGLDEVVSGLPGGPDYEGDQEPRAIAATCGP-VRVWSVYVPNGREIGHPH 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           YD K+ W+        +  +   P    GD+N+ P   D ++   ++     T + R++ 
Sbjct: 120 YDYKLRWLDTLREAVGEDAKGPRPFAVLGDFNVAPTDDDVWDRTRFDGLTHVTDKEREAL 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             L+  G +D +       H +++WDY    + KN+G+RID +  +      +  A +D 
Sbjct: 180 AALRGAGLSDVVPRPLKYDHPFTYWDYRELCFPKNRGMRIDLVYGNGAFADAVGDAYVDR 239

Query: 244 KPRGWTKPSDHTPVIVS 260
           + R     SDH PV+V 
Sbjct: 240 EERKGKGASDHAPVVVD 256


>gi|170727269|ref|YP_001761295.1| exonuclease III [Shewanella woodyi ATCC 51908]
 gi|169812616|gb|ACA87200.1| exodeoxyribonuclease III [Shewanella woodyi ATCC 51908]
          Length = 268

 Score =  200 bits (509), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 86/264 (32%), Positives = 131/264 (49%), Gaps = 9/264 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N IRAR+H L A I  + PDII LQETK  D  FP   ++++ Y +   G K
Sbjct: 1   MKIVSFNINGIRARLHQLQALIDSHQPDIIGLQETKAHDDVFPVADVEAMGYKVHYHGGK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI-NTQTLRIGNLYLPHGNPITS- 121
           ++ GVA+LSK +P+++    P D  D Q R I  TFT  N + L + N Y P G  I+  
Sbjct: 61  AHYGVAMLSKLEPVKVQKGFPTDGEDAQRRMIMGTFTQENGRPLTVLNGYFPQGENISHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175
           TKY  K  + K  + + ++    +E +   GD NI P               +      F
Sbjct: 121 TKYPAKRQFYKDLMIYLNEHHSADEDIAVIGDINISPIDLDIGIGEPNAKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R+  + L + G  D  R  H      YS++DY +  +  N+G+RID ++ +     
Sbjct: 181 QPEEREWLKTLMDWGLLDTFRELHPERVDRYSWFDYRSKGFDDNRGLRIDVVLATKSLAD 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVI 258
            L  + +D   RG  KPSDH P+ 
Sbjct: 241 RLVESDVDYDLRGIEKPSDHAPIW 264


>gi|90406919|ref|ZP_01215110.1| exodeoxyribonuclease III [Psychromonas sp. CNPT3]
 gi|90311961|gb|EAS40055.1| exodeoxyribonuclease III [Psychromonas sp. CNPT3]
          Length = 269

 Score =  200 bits (509), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 85/267 (31%), Positives = 128/267 (47%), Gaps = 9/267 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V ++N+N +RAR+H L A I ++ PD+I LQE K  +  FP E ++ + YH+   GQK
Sbjct: 1   MKVISFNINGLRARLHQLQAIIDKHQPDVIGLQEIKVHNDMFPLEAVEKMGYHVYYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121
           ++ GVA+L K +P+ +    P  DD   +   +      N +   I N Y P G   T  
Sbjct: 61  AHYGVAMLCKKEPVSVQYGFPTDDDEHQKRMIMVTFEDANGEKTTILNGYFPQGESQTHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175
            KY  K  + K    +       E+ +I  GD NI P   D           +      F
Sbjct: 121 IKYPYKRQFYKDLNTYLESHHCAEDNVIIMGDINISPLDLDIGIGEINAKRWLKTKKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E RQ  +KL + GFTD  R  H      YS++DY +  +  N+G+RID I+ + +   
Sbjct: 181 QPEERQWLKKLMDFGFTDTFRLLHPEVSDQYSWFDYRSRGFDDNRGLRIDVILATQKIAD 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261
              ++ ID + RG  KPSDH P+    
Sbjct: 241 NTLNSGIDYELRGIEKPSDHAPIWTEF 267


>gi|296158362|ref|ZP_06841193.1| exodeoxyribonuclease III Xth [Burkholderia sp. Ch1-1]
 gi|295891306|gb|EFG71093.1| exodeoxyribonuclease III Xth [Burkholderia sp. Ch1-1]
          Length = 258

 Score =  200 bits (509), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 84/258 (32%), Positives = 127/258 (49%), Gaps = 1/258 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS++ R  ++  W++    D++CLQE K  D+ FP   L    Y     GQK
Sbjct: 1   MKIATWNVNSLKVRQQHVIDWLETTGTDVLCLQELKLPDEKFPRAELAEKGYRSWFAGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGV IL +       + +  +    +             T R+ + Y P+G    + K
Sbjct: 61  TYNGVGILVRDGLTVDESSIVRNIPGFEDPQQRVIAATIEDT-RVISAYFPNGQAPGTDK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W+     + +  + L   L   GDYNI P+  D ++P  WE     + E R  F
Sbjct: 120 FAYKLRWLAALHDWIASEMALHPKLALLGDYNIAPEDRDVHDPKAWEGQNLVSPEERAEF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            +L  +G  DA R       +YS+WDY   ++ +N G+RIDHI+LS     +  S  ID 
Sbjct: 180 VRLIGLGLVDAFRRFEQPEKIYSWWDYRMMAFRRNAGLRIDHILLSKALAEVCSSCDIDK 239

Query: 244 KPRGWTKPSDHTPVIVSL 261
            PR W +PSDH PV+  L
Sbjct: 240 VPRKWDQPSDHAPVVAQL 257


>gi|145220782|ref|YP_001131460.1| exodeoxyribonuclease III Xth [Mycobacterium gilvum PYR-GCK]
 gi|315442264|ref|YP_004075143.1| exodeoxyribonuclease III [Mycobacterium sp. Spyr1]
 gi|145213268|gb|ABP42672.1| Exodeoxyribonuclease III [Mycobacterium gilvum PYR-GCK]
 gi|315260567|gb|ADT97308.1| Exodeoxyribonuclease III [Mycobacterium sp. Spyr1]
          Length = 272

 Score =  200 bits (509), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 84/270 (31%), Positives = 126/270 (46%), Gaps = 12/270 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSIRAR+  +  W++  + D++ +QETK  D+ FP     +L Y +  CG  
Sbjct: 1   MRLATWNVNSIRARVDRVTDWLERADVDVLAMQETKCSDEQFPTMPFAALGYDVVHCGFS 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-----TQTLRIGNLYLPHGNP 118
            +NGVAI S+     +     G          EA             +R+ +LY+P+G  
Sbjct: 61  QWNGVAIASRVGIDAVEVGFEGQPTWSDKPEAEAAAEARALGATCGGVRVWSLYVPNGRS 120

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIF--AGDYNIIPQPHDCYNPIIWENDACFT 176
           I S  Y  K+ W+      A   L  +        GD+NI P   D ++  ++      T
Sbjct: 121 IDSPHYTYKLKWLAALHNTAQGWLADDPSTPVALVGDWNIAPVDDDVWDISLFSESTHVT 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
              R +F  + + GFTD +R        +++WDY    + KN+G+RID I+ SP    L+
Sbjct: 181 APERAAFNAIVDAGFTDVVRPFTPGPGTFTYWDYTQLRFPKNRGMRIDFILGSPTLAELV 240

Query: 237 HSARIDTKPRGWTK-----PSDHTPVIVSL 261
             A I    R   K     PSDH PV+V L
Sbjct: 241 THAEIARDERKTGKNRVGSPSDHAPVVVDL 270


>gi|260436042|ref|ZP_05790012.1| exodeoxyribonuclease III [Synechococcus sp. WH 8109]
 gi|260413916|gb|EEX07212.1| exodeoxyribonuclease III [Synechococcus sp. WH 8109]
          Length = 288

 Score =  200 bits (509), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 86/272 (31%), Positives = 139/272 (51%), Gaps = 4/272 (1%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSY 65
           +ATWNVNS+R R+  + +W++   PD++CLQETK +D  FP E  +S  +H+   GQK+Y
Sbjct: 14  IATWNVNSVRTRLDQVLSWLESEQPDLLCLQETKVDDPLFPLEAFKSAGWHVHIHGQKAY 73

Query: 66  NGVAILSKYQPIEIVTHLPGDDLDVQAR----FIEATFTINTQTLRIGNLYLPHGNPITS 121
           NGVA++S+    ++     G+  +          +   +     +R+ NLY+P+G+ + S
Sbjct: 74  NGVALISREPLEDVRCGFAGELPNDAEANDLGAQKRVISAMLNGVRVLNLYVPNGSSLKS 133

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            KY  K++W+    R+   + +  EPL   GD+NI  +  D  +P         +   RQ
Sbjct: 134 EKYPYKLAWLGCLKRYLDAQEQRGEPLCMVGDFNIGLEARDLPDPDRQTGGIMASDAERQ 193

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           + +        D  R        +S+WDY + +W +++G RIDH+ L  E   L  S  I
Sbjct: 194 ALRDALGERLQDVFRVFEPDSGHWSWWDYRSGAWDRDRGWRIDHVYLCDELLGLARSCVI 253

Query: 242 DTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDS 273
             + RG  +PSDH PV V +D P     + D 
Sbjct: 254 HKRMRGNQQPSDHAPVSVVVDWPPTDDDEGDE 285


>gi|306836965|ref|ZP_07469915.1| exodeoxyribonuclease III [Corynebacterium accolens ATCC 49726]
 gi|304567148|gb|EFM42763.1| exodeoxyribonuclease III [Corynebacterium accolens ATCC 49726]
          Length = 269

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 81/267 (30%), Positives = 133/267 (49%), Gaps = 8/267 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + TWN+NS+R R       +  ++ D++CLQETK +D  FP E  +   YH+   G  
Sbjct: 1   MRITTWNINSVRTRAQRALDLLHTHDIDVLCLQETKVKDDKFPREAFEDAGYHVTCHGLN 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT-----QTLRIGNLYLPHGNP 118
            +NGVAI+SK QP E+ T  P      +                 + + I +LY+P+G  
Sbjct: 61  QWNGVAIISKEQPEEVFTGFPHQPGFAKDPEKPQDREARALGARIRGVEIWSLYIPNGRE 120

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
           IT   YD K+ ++ +  R+A+   + +  L+  GD+NI P+  D ++   +      T  
Sbjct: 121 ITDRHYDYKLDFLYQLSRYAAGHAQSK--LLLTGDFNIAPRDEDVWDIEAFRGKTHVTEP 178

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
            R +FQ L+  G  +  R   +    Y+++DY    + KN+G+RID  + SP     +  
Sbjct: 179 ERAAFQMLEEAGLEEVTRRFTE-DQRYTYFDYKGMRFHKNEGMRIDFQLASPPLAKHVTG 237

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           AR+D + R   K SDH P+    D+P+
Sbjct: 238 ARVDMEERAGEKTSDHCPLHADFDLPD 264


>gi|258626823|ref|ZP_05721630.1| exodeoxyribonuclease III [Vibrio mimicus VM603]
 gi|258580870|gb|EEW05812.1| exodeoxyribonuclease III [Vibrio mimicus VM603]
          Length = 268

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 79/268 (29%), Positives = 127/268 (47%), Gaps = 9/268 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V ++N+N +RAR+H L A I ++ PD+I LQE K  D+ FP + ++++ Y +   GQK
Sbjct: 1   MKVISFNINGLRARLHQLQALIDKHQPDVIGLQEIKVHDEAFPRQEVEAMGYQVYFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGD-DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121
           ++ GVAIL K  P+E++   P D +   +   +      +     I N Y P G+ +   
Sbjct: 61  AHYGVAILCKQTPVEVIKGFPTDSEEHQKRMIMATFADEDGNKTTILNGYFPQGDNVEHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175
           TK+  K  + +  + +  +     E L+  GD NI P               +      F
Sbjct: 121 TKFPYKRQFYRDLMTYLREHRSNTERLVVMGDINISPLDLDIGIGEANRKRWLQTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R+  Q L + G  D  R  H      +S++DY +  +  N+G+RID I+ +P    
Sbjct: 181 QPEEREWLQTLMDWGLVDTFRQLHPEVSDQFSWFDYRSRGFDDNRGLRIDVILATPTLAE 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
               A ID + RG  KPSDH P+     
Sbjct: 241 TCQEAGIDYELRGIDKPSDHAPIWAIFK 268


>gi|148277|gb|AAA24767.1| exonuclease III [Escherichia coli]
          Length = 268

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 77/266 (28%), Positives = 124/266 (46%), Gaps = 8/266 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A ++++ PD+I LQETK  D  FP E + ++ Y++   GQK
Sbjct: 1   MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVANVGYNVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            + GVA+L+K  PI +    PGDD + Q R I A        + + N Y P G       
Sbjct: 61  GHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSLLGNVTVINGYFPQGESRDHPI 120

Query: 124 -YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
            +  K  + +    +    L+ + P++  GD NI P         +     +      F 
Sbjct: 121 KFPAKAQFYQNLQNYLETELKRDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+   +L + G  D  R  +      +S++DY +  +  N+G+RID ++ S      
Sbjct: 181 PEEREWMDRLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQPLAEC 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
                ID + R   KPSDH PV  + 
Sbjct: 241 CVETGIDYEIRSMEKPSDHAPVWATF 266


>gi|325276378|ref|ZP_08142153.1| exodeoxyribonuclease III [Pseudomonas sp. TJI-51]
 gi|324098490|gb|EGB96561.1| exodeoxyribonuclease III [Pseudomonas sp. TJI-51]
          Length = 264

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 99/262 (37%), Positives = 150/262 (57%), Gaps = 5/262 (1%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           M  + +AT+N+N I +R+  L  W+K   PDI CLQE K  D  FP + +++  Y     
Sbjct: 1   MKNLRIATFNINGISSRLPALLEWLKRERPDIACLQELKAADNKFPRQEIEAAGYGCVYQ 60

Query: 61  GQKSYNGVAILSKY-QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
           GQ ++NGVAIL++  +P+E+   LPG + D Q+R++EA        + +G LYLP+GNP 
Sbjct: 61  GQPAWNGVAILARDSEPLEVRRGLPGMEDDTQSRYLEAA----AHGVLVGCLYLPNGNPQ 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K+D K+ W +  ++ A        P + AGD+N++P   D Y+   W  DA    E 
Sbjct: 117 PGPKFDYKLRWFECLIQHARTLYANGHPALLAGDFNVVPTDLDIYDTRSWLKDALLQPES 176

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R  F+ L   G+TDA+R  +    +Y+FWDY+ + W++N G+RIDH++L+ E +  L  A
Sbjct: 177 RACFEHLLTQGWTDAVRHLYPDERVYTFWDYFRNHWARNAGLRIDHLLLNRELSPYLKGA 236

Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261
            +D   R   K SDH PV V L
Sbjct: 237 GVDAWVRNEAKASDHAPVWVEL 258


>gi|330829038|ref|YP_004391990.1| exodeoxyribonuclease III [Aeromonas veronii B565]
 gi|328804174|gb|AEB49373.1| Exodeoxyribonuclease III [Aeromonas veronii B565]
          Length = 268

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 78/265 (29%), Positives = 133/265 (50%), Gaps = 9/265 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +RAR+H L A I ++ PD+I LQE K  D+ FP   ++++ YH+E  GQK
Sbjct: 1   MKIISFNINGLRARLHQLQAIIDKHQPDVIGLQEIKVHDEAFPLADVEAMGYHVEFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLD-VQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121
           ++ GVAI+SK +P+++    P DD +  +   +      +   +++ N Y P G      
Sbjct: 61  AHYGVAIMSKQKPVKVEKGFPTDDEEAQRRMIMATFEREDGSLIKVMNGYFPQGESQDHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175
           TK+  K  + +    +       ++ L+  GD NI P               + +    F
Sbjct: 121 TKFPAKQKFYEDLQHYLETNHTPDDQLVLIGDMNISPTDLDIGIGEANRKRWLRDGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
               R+  ++L+  G TD  RA + T    +S++DY +  + +N+G+RID IM S     
Sbjct: 181 LPIEREWMERLKGFGLTDTFRAANPTECERFSWFDYRSKGFDENRGLRIDLIMASDALKD 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIV 259
            +    ID + RG  KPSDH P+  
Sbjct: 241 SVTETGIDYELRGIEKPSDHAPIWA 265


>gi|147920374|ref|YP_685852.1| exodeoxyribonuclease III [uncultured methanogenic archaeon RC-I]
 gi|110621248|emb|CAJ36526.1| exodeoxyribonuclease III [uncultured methanogenic archaeon RC-I]
          Length = 257

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 73/265 (27%), Positives = 119/265 (44%), Gaps = 12/265 (4%)

Query: 1   MSVVTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           M+ + + +WNVN +RA +      +++E NPDI+CLQET+  ++  P E + S  YH+  
Sbjct: 1   MTELEILSWNVNGLRAILKKGFVDFMQEKNPDILCLQETRASEEQLPPEIMTSWGYHVYF 60

Query: 60  --CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
               +K Y+GVAILSK +P+ +       + D + R + A +        +         
Sbjct: 61  ASGEKKGYSGVAILSKVKPLSVARGFGIPEFDREGRVLIADYGAF-----VLLNIYFPNG 115

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
             +  +   K+ +   FL +A +       ++  GD N   +  D   P      + F  
Sbjct: 116 KASPERLAYKMRFYNAFLEYADRLKAQGRKIVVCGDVNTAHKEIDIARPRENSKISGFLP 175

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
             R    KL   G+ D  R  +D    Y+FWD    +  +N G RID+  +S      L 
Sbjct: 176 VERAWMDKLIAHGYVDTFRLFNDQPGQYTFWDTVTRARERNVGWRIDYFFVSENLKEQLK 235

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLD 262
           +A I T+  G    SDH P+ + LD
Sbjct: 236 AAFIMTEIMG----SDHCPIGIRLD 256


>gi|325145191|gb|EGC67473.1| exodeoxyribonuclease III [Neisseria meningitidis M01-240013]
          Length = 256

 Score =  200 bits (509), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 90/260 (34%), Positives = 134/260 (51%), Gaps = 4/260 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + TWNVNS+  R+  +   + +N PDI+ LQE K +   FP   LQ + +H    GQK
Sbjct: 1   MKITTWNVNSLNVRLPQVQNLLADNPPDILVLQELKLDQDKFPAAALQMMGWHCVWSGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAI+S+  P ++   LP    D Q R I AT       +R+ N+Y  +G  + S K
Sbjct: 61  TYNGVAIVSRNAPEDVNIGLPALPDDPQRRVIAATVGG----VRVINVYCVNGEALDSPK 116

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K  W      F    +     L+  GD+NI P   DCY+P  W      +   RQ F
Sbjct: 117 FKYKEQWFAALTEFVRDEMARHGKLVLLGDFNIAPADADCYDPEKWYEKIHCSTVERQWF 176

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q L ++G TD++R  H     Y+++DY    + +  G+RIDHI+++ E  ++L   R+D 
Sbjct: 177 QNLLDLGLTDSLRHIHPEGAFYTWFDYRGAMFQRKLGLRIDHILVTSEMAAVLKDVRVDL 236

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
             R   +PSDH PV    D 
Sbjct: 237 DTRALERPSDHAPVTAEFDW 256


>gi|77360282|ref|YP_339857.1| exonuclease III [Pseudoalteromonas haloplanktis TAC125]
 gi|76875193|emb|CAI86414.1| exonuclease III [Pseudoalteromonas haloplanktis TAC125]
          Length = 268

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 81/268 (30%), Positives = 122/268 (45%), Gaps = 9/268 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V ++N+N +RAR+H L A I ++ PDII LQE K  D+ FP E +Q + YH+   GQK
Sbjct: 1   MKVISFNINGLRARLHQLQAIIDKHQPDIIGLQEIKVHDEAFPLEDVQKMGYHVYYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHL-PGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121
           ++ GVA+L K +P  +        +   +          N + L + N Y P G  I   
Sbjct: 61  AHYGVAMLCKKEPKSVFKGFATDTEESQKRMISVTVEQDNGRDLTVMNGYFPQGENINHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175
           TK+  K  + K  +         +E +I  GD NI P   D           +      F
Sbjct: 121 TKFPYKRQFYKDLMTHLQTNHTPDEDVIVMGDINISPTNLDIGIGEVNAKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
               R+    L N GF D  R  +      YS++DY +  +  N+G+RID ++ + E  +
Sbjct: 181 QPIEREWLATLLNWGFKDTFREQNPETSDQYSWFDYRSKGFLDNRGLRIDVVLATHELAA 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
                 ID + RG  KPSDH P+     
Sbjct: 241 RCIDTGIDYELRGIEKPSDHAPIWSEFK 268


>gi|121635466|ref|YP_975711.1| exodeoxyribonuclease III [Neisseria meningitidis FAM18]
 gi|120867172|emb|CAM10939.1| exodeoxyribonuclease III [Neisseria meningitidis FAM18]
 gi|325132946|gb|EGC55623.1| exodeoxyribonuclease III [Neisseria meningitidis M6190]
 gi|325138934|gb|EGC61484.1| exodeoxyribonuclease III [Neisseria meningitidis ES14902]
 gi|325142997|gb|EGC65353.1| exodeoxyribonuclease III [Neisseria meningitidis 961-5945]
 gi|325198917|gb|ADY94373.1| exodeoxyribonuclease III [Neisseria meningitidis G2136]
          Length = 256

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 90/260 (34%), Positives = 134/260 (51%), Gaps = 4/260 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + TWNVNS+  R+  +   + +N PDI+ LQE K +   FP   LQ + +H    GQK
Sbjct: 1   MKITTWNVNSLNVRLPQVQNLLADNPPDILVLQELKLDQDKFPAAALQMMGWHCVWSGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAI+S+  P ++   LP    D Q R I AT       +R+ N+Y  +G  + S K
Sbjct: 61  TYNGVAIVSRNAPEDVHIGLPALPDDPQRRVIAATVGG----VRVINVYCVNGEALDSPK 116

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K  W      F    +     L+  GD+NI P   DCY+P  W      +   RQ F
Sbjct: 117 FKYKEQWFAALTEFVRDEMARHGKLVLLGDFNIAPADADCYDPEKWYEKIHCSTVERQWF 176

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q L ++G TD++R  H     Y+++DY    + +  G+RIDHI+++ E  ++L   R+D 
Sbjct: 177 QNLLDLGLTDSLRHIHPEGAFYTWFDYRGAMFQRKLGLRIDHILVTSEMAAVLKDVRVDL 236

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
             R   +PSDH PV    D 
Sbjct: 237 DTRALERPSDHAPVTAEFDW 256


>gi|326383425|ref|ZP_08205112.1| exodeoxyribonuclease III Xth [Gordonia neofelifaecis NRRL B-59395]
 gi|326197831|gb|EGD55018.1| exodeoxyribonuclease III Xth [Gordonia neofelifaecis NRRL B-59395]
          Length = 260

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 78/260 (30%), Positives = 124/260 (47%), Gaps = 3/260 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSIRAR   + AW+  +  D++ +QETK  D  FP  +  +  Y +   G  
Sbjct: 1   MRLATWNVNSIRARSEQVVAWMNRHAIDVLAMQETKCPDDQFPVMSFLAHGYDVAFHGTG 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            YNGVAI S+    ++     G       R   A        +R+ +LY+P+G       
Sbjct: 61  GYNGVAIASRIGVHDVHIGFDGQPTYDGEREARAISATCGD-VRVWSLYVPNGREPGHPH 119

Query: 124 YDDKISWIKRFLRFASQRLELEE--PLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
           +  K+ W+       S  L  +    ++ AGD+N+ P   D ++P  +E+    + E R 
Sbjct: 120 FQYKLDWLSALGDVTSLELSHDPAAQVVLAGDWNVAPTDDDVWDPEYFESRTHTSEEERA 179

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           +F+     GF D+          Y+FWDY A  +++N+G+RID  + SP     ++ A I
Sbjct: 180 AFRHFIEGGFVDSAAPYTTDPKTYTFWDYQAGRFARNEGMRIDFALCSPALDDRVYDAFI 239

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
           D   R     SDH P++  L
Sbjct: 240 DRAARAAEGASDHAPIVFDL 259


>gi|241761646|ref|ZP_04759733.1| exodeoxyribonuclease III Xth [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|241373954|gb|EER63487.1| exodeoxyribonuclease III Xth [Zymomonas mobilis subsp. mobilis ATCC
           10988]
          Length = 261

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 111/260 (42%), Positives = 160/260 (61%), Gaps = 6/260 (2%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64
            +A++NVN I AR+  L  W+++  PDI+CLQE K++D  FP E ++   Y+    GQK+
Sbjct: 3   KIASFNVNGINARLPRLIEWLEKFQPDILCLQELKSDDARFPQEEIEKTGYYCLYHGQKA 62

Query: 65  YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124
           YNGVAILSK QP  I T LP D    Q+R+IEA        L + +LYLP+GNP+ S+KY
Sbjct: 63  YNGVAILSKEQPKLIRTSLPDDPDPTQSRYIEAAID----NLTVSSLYLPNGNPLNSSKY 118

Query: 125 DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH--DCYNPIIWENDACFTLEVRQS 182
           D K++W K FL  A    + E+ +I AGDYN++P     D  N     ++A    +    
Sbjct: 119 DYKLAWFKAFLAHARSLWQQEKSVILAGDYNVVPSFDIKDIRNAAALADNALLAPDSLFY 178

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           +++L  MG+TD++R  H +  LYSFWDY A SW ++ G+RIDHI+L+P+    L  + +D
Sbjct: 179 WRQLLAMGWTDSLRVRHPSEPLYSFWDYQAQSWPRDDGMRIDHILLTPDLADGLTDSGVD 238

Query: 243 TKPRGWTKPSDHTPVIVSLD 262
            + RG  K SDH PV + +D
Sbjct: 239 RQMRGQEKASDHAPVWIEID 258


>gi|88860007|ref|ZP_01134646.1| exodeoxyribonuclease III [Pseudoalteromonas tunicata D2]
 gi|88818001|gb|EAR27817.1| exodeoxyribonuclease III [Pseudoalteromonas tunicata D2]
          Length = 267

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 78/267 (29%), Positives = 122/267 (45%), Gaps = 8/267 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +RAR+H L A I+++ PD+I LQE K  D+ FP   ++++ YH+   GQK
Sbjct: 1   MKIISFNINGLRARLHQLQALIEKHQPDVIGLQEIKVHDEAFPLADVEAMGYHVYFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLD-VQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           ++ GVA+L K +P+ I    P D  +  +            Q ++I N Y P G+ I   
Sbjct: 61  AHYGVAMLCKKEPLSIEKGFPTDTDEAQRRMITVTIEDEQGQPVKIMNGYFPQGDSIHHE 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACFT 176
                     + L       +    L+  GD NI P   D           +      F 
Sbjct: 121 TKFPYKEQFYKDLMTYLASQDPASQLVVMGDINISPLDKDIGIGEVNAKRWLKTGKCSFQ 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHH-LYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
              RQ    L   GFTD  R  H   +  +S++DY +  +  N+G+RID I+ +    + 
Sbjct: 181 PIERQWLADLMAWGFTDTFRQIHPDTNAHFSWFDYRSKGFDDNRGLRIDVILATASLAAR 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262
              A ID + R   KPSDH P+  S  
Sbjct: 241 CVDAGIDYELRAIDKPSDHAPIWASFK 267


>gi|157146023|ref|YP_001453342.1| exonuclease III [Citrobacter koseri ATCC BAA-895]
 gi|157083228|gb|ABV12906.1| hypothetical protein CKO_01777 [Citrobacter koseri ATCC BAA-895]
          Length = 268

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 78/268 (29%), Positives = 123/268 (45%), Gaps = 8/268 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L+A + ++ PD+I LQETK  D  FP E +  L Y++   GQK
Sbjct: 1   MKFVSFNINGLRARPHQLSAIVDKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122
            + GVA+L+K  P+ +    P D  + Q R I A       ++ + N Y P G       
Sbjct: 61  GHYGVALLTKETPVSVRRGFPDDGEEAQRRIIMAEIPSPLGSITVINGYFPQGESRDHPL 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  + +    +    L+ + P++  GD NI P         +     +      F 
Sbjct: 121 KFPAKAQFYQNLQNYLDNELKRDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+   +L N G  D  R  H      +S++DY +  +  N+G+RID ++ S      
Sbjct: 181 PEEREWMDRLINWGLVDTFRHAHPETVDKFSWFDYRSKGFDDNRGLRIDLLLASNPLAEH 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                ID + R   KPSDH PV     +
Sbjct: 241 CVETGIDYEIRSMEKPSDHAPVWAKFRV 268


>gi|90579330|ref|ZP_01235140.1| putative exodeoxyribonuclease III [Vibrio angustum S14]
 gi|90440163|gb|EAS65344.1| putative exodeoxyribonuclease III [Vibrio angustum S14]
          Length = 268

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 88/264 (33%), Positives = 133/264 (50%), Gaps = 9/264 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V ++N+N +RAR+H L A I+++ PD+I LQE K  D+ FP   ++++ Y +   GQK
Sbjct: 1   MKVISFNINGLRARLHQLQALIEKHQPDVIGLQEIKVHDEAFPLADVEAMGYKVYFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI-NTQTLRIGNLYLPHGNPITS- 121
           ++ GVA+L K +PI +    P DD D Q R I  TF   N + + + N Y P G+ I   
Sbjct: 61  AHYGVAMLCKQEPISVQKGFPTDDEDAQRRMIMTTFKQDNGKNITVMNGYFPQGDNIKHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175
           TK+  K  +    + + +     +E LI  GD NI P               +      F
Sbjct: 121 TKFPAKEKFYADLMNYLNTAHTNDEELIVMGDINISPTDLDIGIGPANAKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
               R+  Q L + GF D  R  H T    YS++DY +  +  N+G+RID I+ +P    
Sbjct: 181 QPVEREWLQTLLDWGFVDTFRQLHPTVDDKYSWFDYRSKGFVDNRGLRIDVILATPSLAE 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVI 258
               + ID + RG  KPSDH P+ 
Sbjct: 241 RCIESDIDYELRGIEKPSDHAPIW 264


>gi|39996639|ref|NP_952590.1| exonuclease III [Geobacter sulfurreducens PCA]
 gi|39983520|gb|AAR34913.1| exodeoxyribonuclease III [Geobacter sulfurreducens PCA]
 gi|298505653|gb|ADI84376.1| exodeoxyribonuclease III [Geobacter sulfurreducens KN400]
          Length = 271

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 91/271 (33%), Positives = 138/271 (50%), Gaps = 11/271 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++NVN +R+R+H L   ++ + PDII LQETK +D +FP   +Q+L YH+   GQK
Sbjct: 1   MKLVSFNVNGLRSRLHQLEELVRTHRPDIIGLQETKVQDADFPLAAVQALGYHVIYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-TQTLRIGNLYLPHGNPITST 122
           +++GVA+LS   P ++   LPGD  + Q RFI ATF +     LR+ N Y P G      
Sbjct: 61  THHGVALLSLQPPRDVRLGLPGDGDEAQKRFIGATFDLPAGPPLRVINGYFPQGESRDHP 120

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175
            K+  K  +    L +     + + PL   GD+NI P         D     +      F
Sbjct: 121 VKFPAKERFYADVLAYLKSSCDPDAPLAVMGDFNIAPVDPDIGIGADNAKRWLRTGKTSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232
             E R  F  L++ G  D+ R  +      +S++DY +  +     +G+RIDHI+L+   
Sbjct: 181 LPEERAWFAALRDWGLHDSYRELYPDIDDRFSWFDYRSRGFESEPKRGLRIDHILLTRPL 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                +A ID   R   KPSDH PV V +D+
Sbjct: 241 QQACRAAGIDYDIRAMEKPSDHCPVWVEVDV 271


>gi|329119607|ref|ZP_08248288.1| exodeoxyribonuclease III [Neisseria bacilliformis ATCC BAA-1200]
 gi|327464204|gb|EGF10508.1| exodeoxyribonuclease III [Neisseria bacilliformis ATCC BAA-1200]
          Length = 276

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 89/261 (34%), Positives = 132/261 (50%), Gaps = 4/261 (1%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
            + +ATWNVNS+  R+  +  W+ E+ PDI+ LQE K +   FP   L  + +     GQ
Sbjct: 13  TMKIATWNVNSLNVRLPQVQNWLAEHQPDILALQELKLDQDKFPAAALAMMGWQCAWSGQ 72

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K+YNGVAI+S +   ++ T LP    D Q R I AT       +R+ N+Y  +G    S 
Sbjct: 73  KTYNGVAIVSLHPLHDVRTGLPALPDDPQRRVIAATIGG----VRVINVYCVNGEAPDSP 128

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           K+  K  W      F    L   + L+  GD+NI P   DCY+P  W      T + R  
Sbjct: 129 KFQYKKQWFAALTEFVRGELARHDKLVLLGDFNIAPADADCYDPEKWRGKILCTDQERGW 188

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           FQ L  +G TD++R  H     Y+++DY    + +  G+RIDH++ +P   + L +A +D
Sbjct: 189 FQTLLGLGLTDSLRRIHPEGAFYTWFDYRGAMFQRGLGLRIDHLLTTPALAAALQNAAVD 248

Query: 243 TKPRGWTKPSDHTPVIVSLDI 263
              R   +PSDH PV     +
Sbjct: 249 LDARAQERPSDHAPVWAEFAL 269


>gi|15641862|ref|NP_231494.1| exonuclease III [Vibrio cholerae O1 biovar El Tor str. N16961]
 gi|121587322|ref|ZP_01677094.1| exodeoxyribonuclease III [Vibrio cholerae 2740-80]
 gi|147674047|ref|YP_001217394.1| exonuclease III [Vibrio cholerae O395]
 gi|153820118|ref|ZP_01972785.1| exodeoxyribonuclease III [Vibrio cholerae NCTC 8457]
 gi|227081989|ref|YP_002810540.1| exodeoxyribonuclease III [Vibrio cholerae M66-2]
 gi|229508043|ref|ZP_04397548.1| exodeoxyribonuclease III [Vibrio cholerae BX 330286]
 gi|229511718|ref|ZP_04401197.1| exodeoxyribonuclease III [Vibrio cholerae B33]
 gi|229518856|ref|ZP_04408299.1| exodeoxyribonuclease III [Vibrio cholerae RC9]
 gi|229607590|ref|YP_002878238.1| exonuclease III [Vibrio cholerae MJ-1236]
 gi|254848946|ref|ZP_05238296.1| exonuclease III [Vibrio cholerae MO10]
 gi|255745380|ref|ZP_05419329.1| exodeoxyribonuclease III [Vibrio cholera CIRS 101]
 gi|262153517|ref|ZP_06028646.1| exodeoxyribonuclease III [Vibrio cholerae INDRE 91/1]
 gi|262167417|ref|ZP_06035124.1| exodeoxyribonuclease III [Vibrio cholerae RC27]
 gi|298498101|ref|ZP_07007908.1| exodeoxyribonuclease III [Vibrio cholerae MAK 757]
 gi|9656389|gb|AAF95008.1| exodeoxyribonuclease III [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121548482|gb|EAX58540.1| exodeoxyribonuclease III [Vibrio cholerae 2740-80]
 gi|126509336|gb|EAZ71930.1| exodeoxyribonuclease III [Vibrio cholerae NCTC 8457]
 gi|146315930|gb|ABQ20469.1| exodeoxyribonuclease III [Vibrio cholerae O395]
 gi|227009877|gb|ACP06089.1| exodeoxyribonuclease III [Vibrio cholerae M66-2]
 gi|227013758|gb|ACP09968.1| exodeoxyribonuclease III [Vibrio cholerae O395]
 gi|229343545|gb|EEO08520.1| exodeoxyribonuclease III [Vibrio cholerae RC9]
 gi|229351683|gb|EEO16624.1| exodeoxyribonuclease III [Vibrio cholerae B33]
 gi|229355548|gb|EEO20469.1| exodeoxyribonuclease III [Vibrio cholerae BX 330286]
 gi|229370245|gb|ACQ60668.1| exodeoxyribonuclease III [Vibrio cholerae MJ-1236]
 gi|254844651|gb|EET23065.1| exonuclease III [Vibrio cholerae MO10]
 gi|255737210|gb|EET92606.1| exodeoxyribonuclease III [Vibrio cholera CIRS 101]
 gi|262024114|gb|EEY42808.1| exodeoxyribonuclease III [Vibrio cholerae RC27]
 gi|262030644|gb|EEY49279.1| exodeoxyribonuclease III [Vibrio cholerae INDRE 91/1]
 gi|297542434|gb|EFH78484.1| exodeoxyribonuclease III [Vibrio cholerae MAK 757]
          Length = 268

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 79/268 (29%), Positives = 128/268 (47%), Gaps = 9/268 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V ++N+N +RAR+H L A I ++ PD+I LQE K  D+ FP + ++++ Y +   GQK
Sbjct: 1   MKVISFNINGLRARLHQLQALIDKHQPDVIGLQEIKVHDEAFPRQEVEAMGYQVYFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121
           ++ GVAIL K  P+E++   P  ++   +   +      N Q   I N Y P G+ +   
Sbjct: 61  AHYGVAILCKQTPVEVIKGFPTDNEEHQKRMIMATFADQNGQKTTILNGYFPQGDNVEHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175
           TK+  K  + +  + +  +     E L+  GD NI P               +      F
Sbjct: 121 TKFPYKRQFYRDLMTYLREHRSNSERLVVMGDINISPLDLDIGIGEANRKRWLQTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R+  Q L + G  D  R  H      +S++DY +  +  N+G+RID I+ +P    
Sbjct: 181 QPEEREWLQTLLDWGLVDTFRQLHPDVSDQFSWFDYRSRGFEDNRGLRIDVILATPTLAE 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
               A ID + R   KPSDH P+  +  
Sbjct: 241 TCQEAGIDYELRAIDKPSDHAPIWTTFK 268


>gi|260754011|ref|YP_003226904.1| exodeoxyribonuclease III Xth [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
 gi|258553374|gb|ACV76320.1| exodeoxyribonuclease III Xth [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
          Length = 261

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 113/260 (43%), Positives = 160/260 (61%), Gaps = 6/260 (2%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64
            +A++NVN I AR+  L  W+++  PDI+CLQE K++D  FP E ++   Y+    GQK+
Sbjct: 3   KIASFNVNGINARLPRLIEWLEKFQPDILCLQELKSDDARFPQEEIEKTGYYCLYHGQKA 62

Query: 65  YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124
           YNGVAILSK QP  I T LP D    Q+R+IEA        L + +LYLP+GNP+ S KY
Sbjct: 63  YNGVAILSKEQPKLIRTSLPDDPDPTQSRYIEAEID----NLTVASLYLPNGNPLNSPKY 118

Query: 125 DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH--DCYNPIIWENDACFTLEVRQS 182
           D K++W K FL  A    + E+P+I AGDYN++P     D  N     ++A    E    
Sbjct: 119 DYKLAWFKAFLAHARSLWQQEKPVILAGDYNVVPSFDIKDIRNAAALADNALLAPESLFY 178

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           +++L  MG+TD++R  H +  LYSFWDY A SW ++ G+RIDHI+L+P+    L  + +D
Sbjct: 179 WRQLLAMGWTDSLRVRHLSEPLYSFWDYQAQSWPRDDGMRIDHILLTPDLADGLTDSGVD 238

Query: 243 TKPRGWTKPSDHTPVIVSLD 262
            + RG  K SDH PV + +D
Sbjct: 239 RQMRGQEKASDHAPVWIEID 258


>gi|319426820|gb|ADV54894.1| exodeoxyribonuclease III [Shewanella putrefaciens 200]
          Length = 270

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 87/268 (32%), Positives = 131/268 (48%), Gaps = 9/268 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +R+R+H L A I  + PDII LQETK  D+ FP   ++++ Y +   G K
Sbjct: 1   MKIVSFNINGLRSRLHQLQALIDSHKPDIIGLQETKVHDEAFPLAEVEAMGYQVHYHGGK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122
           ++ GVA+LSK  P +I    P DD D Q R I  TF   N + L + N Y P G  I   
Sbjct: 61  AHYGVAMLSKVAPQKIQKGFPSDDEDAQRRMIIGTFSQANGRPLTVFNGYFPQGESIDHP 120

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175
            KY  K  + +  + +       +E +   GD NI P   D           +      F
Sbjct: 121 TKYPAKRKFYQDLMHYLQTNHSNDEDIAIIGDINISPTDLDIGIGEVNRKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R+  + LQ+ G  D  R  H      YS++DY +  +  N+G+RID I+ +P   +
Sbjct: 181 QPEEREWLKTLQDWGLIDTFRQLHPERTERYSWFDYRSKGFDDNRGLRIDVILATPSLAA 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
            L  + +D   RG  KPSDH P+  +  
Sbjct: 241 RLIESDVDYDLRGIDKPSDHAPIWSTFK 268


>gi|163868656|ref|YP_001609865.1| exodeoxyribonuclease III [Bartonella tribocorum CIP 105476]
 gi|161018312|emb|CAK01870.1| exodeoxyribonuclease III [Bartonella tribocorum CIP 105476]
          Length = 260

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 129/260 (49%), Positives = 176/260 (67%), Gaps = 1/260 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+  I+AR   L  W++++ PDI+CLQE K+ D++FP + +++L YHIET GQK
Sbjct: 1   MKIATWNIAGIKARHETLYQWLQKSQPDIVCLQEIKSIDESFPRDAIENLGYHIETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           S+NGVAILSK  P E++  LPG+D D Q R+IEA ++ N   +RI +LYLP+GNPI S K
Sbjct: 61  SFNGVAILSKKTPDEVIRRLPGNDNDEQTRYIEAVYSTNKGVVRIASLYLPNGNPIESEK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W++R        L  EEPL+ AGDYN+IP P D   P  W  DA F  + R++F
Sbjct: 121 YSYKMEWMERLYAHTKSLLAYEEPLVLAGDYNVIPTPLDAKKPQEWNQDALFLQKTRKAF 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q++ ++G  DAIR   DT   +SFWD+ A +W KN GIRIDH++LSPEA   L  A   T
Sbjct: 181 QRILHLGLYDAIRNVTDTP-SFSFWDFQAGAWPKNNGIRIDHLLLSPEAVDRLICAHSQT 239

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
           + RG+ KPSDH PV + L+I
Sbjct: 240 EVRGYPKPSDHVPVWIHLNI 259


>gi|163796419|ref|ZP_02190379.1| Exonuclease III [alpha proteobacterium BAL199]
 gi|159178269|gb|EDP62813.1| Exonuclease III [alpha proteobacterium BAL199]
          Length = 264

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 72/265 (27%), Positives = 111/265 (41%), Gaps = 5/265 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62
           + V TWN+NS+R R+      I    PD++CLQETK     FP        Y H    G 
Sbjct: 1   MRVVTWNINSVRLRLPRALELIAAVQPDVLCLQETKAMADQFPAAAFAEAGYPHQAVSGM 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K YNGVA++S+    E          D +   +            +        +P  + 
Sbjct: 61  KGYNGVAVVSRLPIEETDRCDFCAKADARHVAVRVAGGPELHNFYVPAG-GDVPDPAVNP 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           K+  K+ ++     + +     E+P+I  GD NI P   D ++          T    ++
Sbjct: 120 KFAHKLDFLAESRAWFTAERTREQPMILVGDLNIAPLQTDVWSHKQLLGVVSHTPVEVEA 179

Query: 183 FQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLLHSA 239
              LQ          +       LY++W Y A  W   N+G R+DH+ ++P     + +A
Sbjct: 180 LGALQADLGWVDAVRQRIPPEQSLYTWWSYRARDWDESNRGRRLDHVWVTPPLAGTVRAA 239

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIP 264
            +  + RGW K SDH PVIV LD+ 
Sbjct: 240 SVLREARGWEKASDHVPVIVDLDLS 264


>gi|114798068|ref|YP_760636.1| exodeoxyribonuclease III [Hyphomonas neptunium ATCC 15444]
 gi|114738242|gb|ABI76367.1| exodeoxyribonuclease III [Hyphomonas neptunium ATCC 15444]
          Length = 258

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 98/259 (37%), Positives = 145/259 (55%), Gaps = 2/259 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS++AR+  +   + + N D++CLQE K E   FP+  ++ L ++    GQK
Sbjct: 1   MRIATWNVNSMKARLQTVLQVLTDINADVVCLQELKCETDAFPYLEIEELGWNCAVHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           SYNGVA+LSK+   ++   +     D           +  + +R+G LYLP+GNP    K
Sbjct: 61  SYNGVALLSKFPLQDVTREMSTLKDDQARYIEAT--VLTDKPVRVGGLYLPNGNPAPGPK 118

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           YD K+ W+      A   L+ EEP +  GDYN IP P DC++  +W  DA    E R ++
Sbjct: 119 YDYKLEWVAALEDHARSLLKAEEPFVLCGDYNAIPAPEDCWDDTVWNTDALGLPETRAAW 178

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           ++L+++G TDA        H Y+FWDY   ++ K+ GIRIDHI+  P  T  L +  I  
Sbjct: 179 RQLKHLGLTDAFEVCDGRAHQYTFWDYQGGAFQKDHGIRIDHILACPRMTDRLTAIEIYR 238

Query: 244 KPRGWTKPSDHTPVIVSLD 262
           K R   KPSDH P+I   +
Sbjct: 239 KARAMDKPSDHVPMIAIFE 257


>gi|21233468|ref|NP_639385.1| exodeoxyribonuclease III [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66770432|ref|YP_245194.1| exodeoxyribonuclease III [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|188993642|ref|YP_001905652.1| Exodeoxyribonuclease III [Xanthomonas campestris pv. campestris
           str. B100]
 gi|21115315|gb|AAM43267.1| exodeoxyribonuclease III [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66575764|gb|AAY51174.1| exodeoxyribonuclease III [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|167735402|emb|CAP53617.1| Exodeoxyribonuclease III [Xanthomonas campestris pv. campestris]
          Length = 259

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 94/259 (36%), Positives = 140/259 (54%), Gaps = 6/259 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A+WNVNS+  R+ +L  W+ +  PD++ +QETK ED  FP   L +L Y    CGQK
Sbjct: 1   MKIASWNVNSLNVRLPHLQQWLADFAPDVVGIQETKLEDHKFPDAALAALGYRSVFCGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAILS+   +E+   +PG D   Q              +RI NLY+ +G  + + K
Sbjct: 61  TYNGVAILSRSPALEVQMGIPGFDDVQQRVIAATVDG-----VRIINLYVVNGQDVGTDK 115

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW-ENDACFTLEVRQS 182
           Y  K+ W++    + +Q L+    L+  GD+NI P   D Y P +W +N    +   R +
Sbjct: 116 YAYKLRWLEAVHDWIAQELQRHPQLVVLGDFNIAPDARDVYEPEVWSDNHILTSTAERGA 175

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
             KL  +G  DA R  HD    +S+WDY   ++ +N G+RID  ++S    +    A ID
Sbjct: 176 LHKLLALGLHDAFRLHHDDAGHFSWWDYRQAAYRRNLGLRIDLTLVSDALRARAVEAGID 235

Query: 243 TKPRGWTKPSDHTPVIVSL 261
            +PR W +PSDH P  V L
Sbjct: 236 REPRTWERPSDHAPAWVRL 254


>gi|157961464|ref|YP_001501498.1| exonuclease III [Shewanella pealeana ATCC 700345]
 gi|157846464|gb|ABV86963.1| exodeoxyribonuclease III [Shewanella pealeana ATCC 700345]
          Length = 268

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 87/267 (32%), Positives = 136/267 (50%), Gaps = 9/267 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +RAR+H L A I  + PDII LQETK  D+ FPF  ++++ Y +   G K
Sbjct: 1   MKIVSFNINGLRARLHQLQALIDSHQPDIIGLQETKVHDEAFPFADVEAMGYKVHYHGGK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI-NTQTLRIGNLYLPHGNPITS- 121
           ++ GVA+LSK +PI++    P D+ D Q R I  TFT  N + L + N Y P G+ I+  
Sbjct: 61  AHYGVAMLSKLEPIKVQKGFPTDEEDAQRRMIMGTFTQENGRPLTVLNGYFPQGDNISHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175
           TKY  K  + K  + + ++    +E +   GD NI P               +      F
Sbjct: 121 TKYPAKRKFYKDLMLYLNEYHSSDEDIAIIGDINISPVDLDIGIGEPNAKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R+  + L + G  D  R  H      YS++DY +  +  N+G+RID ++ +     
Sbjct: 181 QPEEREWLKTLMDWGLVDTFRELHPERSERYSWFDYRSKGFVDNRGLRIDVVLATKTLAE 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261
            L  + +D   RG  KPSDH P+  + 
Sbjct: 241 RLTESDVDYDLRGIDKPSDHAPIWSTF 267


>gi|301310211|ref|ZP_07216150.1| exodeoxyribonuclease III [Bacteroides sp. 20_3]
 gi|300831785|gb|EFK62416.1| exodeoxyribonuclease III [Bacteroides sp. 20_3]
          Length = 284

 Score =  200 bits (508), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 82/265 (30%), Positives = 138/265 (52%), Gaps = 12/265 (4%)

Query: 1   MSVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HI 57
           +  + + T+N N +RA +   L  W+ +  PD++C+QETK +   FP ET ++L Y  ++
Sbjct: 29  LEKLKIITYNTNGLRAAVGKGLPEWLAQEQPDVLCIQETKLQPDQFPSETFEALGYKSYL 88

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
            +  +K Y+GVAIL+K +P  I   +  +  D + RF+ A F      + I ++Y P G 
Sbjct: 89  FSAQKKGYSGVAILTKQEPDHIEYGMGIEKYDNEGRFLRADFG----DVSIVSVYHPSG- 143

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
                + D K+ W++ F ++  +  +    LI  GDYNI  +P D ++PI    ++ F  
Sbjct: 144 TSGDERQDFKMLWLEDFQKYVVELQKSRPNLILCGDYNICHEPIDIHDPIRNAKNSGFLP 203

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
           E R+   +  + GFTD  R  +     Y++W Y  +S SKNKG RID+ M+S      + 
Sbjct: 204 EEREWMTRFLSAGFTDTFRFLNPDKQEYTWWSYRFNSRSKNKGWRIDYCMVSDNMKPKVK 263

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLD 262
           +A I          SDH P ++ ++
Sbjct: 264 AAYILNDA----VHSDHCPAVLEIE 284


>gi|170721574|ref|YP_001749262.1| exonuclease III [Pseudomonas putida W619]
 gi|169759577|gb|ACA72893.1| exodeoxyribonuclease III [Pseudomonas putida W619]
          Length = 270

 Score =  200 bits (507), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 86/269 (31%), Positives = 132/269 (49%), Gaps = 11/269 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +  +N+N +RAR H LAA I+++ PD+I LQETK  D  FP   +Q+L YH+   GQK
Sbjct: 1   MKIVCFNINGLRARPHQLAALIEKHQPDVIGLQETKVSDDQFPLADVQALGYHVHYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122
            + GVA+LS+  P+ +      D+ D Q RFI  TF   N   + I N Y P G      
Sbjct: 61  GHYGVALLSRQAPLSLFKGFATDEEDAQRRFIWGTFADANGTPITIMNGYFPQGESRDHP 120

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175
            K+  K  +          + + ++P++  GD NI PQ        D     +      F
Sbjct: 121 TKFPAKQRFYSDLQALLEGQFKQDQPVLVMGDMNISPQDCDIGIGPDNAKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232
             E R+  ++L+  G  D+ R  H      +S++DY +  +     +G+RID IM S   
Sbjct: 181 LPEEREWMERLKGWGLVDSFRHLHPEVTDRFSWFDYRSRGFEDEPKRGLRIDLIMASQHL 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
              + +A +D + R   KPSDH P+ + L
Sbjct: 241 VPRIKAAGVDYELRAMEKPSDHAPIWLEL 269


>gi|89072737|ref|ZP_01159302.1| putative exodeoxyribonuclease III [Photobacterium sp. SKA34]
 gi|89051557|gb|EAR57011.1| putative exodeoxyribonuclease III [Photobacterium sp. SKA34]
          Length = 268

 Score =  200 bits (507), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 81/268 (30%), Positives = 131/268 (48%), Gaps = 9/268 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V ++N+N +RAR+H L A I+++ PD+I LQE K  D+ FP   ++++ Y +   GQK
Sbjct: 1   MKVISFNINGLRARLHQLQALIEKHQPDVIGLQEIKVHDEAFPLADVEAMGYKVYFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLD-VQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121
           ++ GVA+L K +PI +    P DD +  +   +      + + + + N Y P G+ I   
Sbjct: 61  AHYGVAMLCKQEPISVQKGFPTDDENAQRRMIMATFKQDSGKNITVMNGYFPQGDNIKHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175
           TK+  K  +    + + +     +E LI  GD NI P               +      F
Sbjct: 121 TKFPAKEKFYADLMNYLNTAHTNDEELIVMGDINISPMDLDIGIGPANAKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
               R+  Q L + GFTD  R  H T    YS++DY +  +  N+G+RID I+ +P    
Sbjct: 181 QPIEREWLQTLLDWGFTDTFRQLHPTVDDKYSWFDYRSKGFVDNRGLRIDVILATPSLAE 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
               + +D + RG  KPSDH P+     
Sbjct: 241 RCIESDVDYELRGIEKPSDHAPIWSVFK 268


>gi|46143793|ref|ZP_00134262.2| COG0708: Exonuclease III [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|165976406|ref|YP_001651999.1| exonuclease III [Actinobacillus pleuropneumoniae serovar 3 str.
           JL03]
 gi|307245885|ref|ZP_07527970.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|307247975|ref|ZP_07530006.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
 gi|307250227|ref|ZP_07532183.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
 gi|307252613|ref|ZP_07534507.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|307254858|ref|ZP_07536684.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|307257023|ref|ZP_07538799.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
 gi|307259300|ref|ZP_07541029.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
 gi|307261462|ref|ZP_07543133.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
 gi|307263645|ref|ZP_07545256.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
 gi|165876507|gb|ABY69555.1| exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|306853245|gb|EFM85465.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|306855529|gb|EFM87701.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
 gi|306857756|gb|EFM89856.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
 gi|306859935|gb|EFM91954.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|306862229|gb|EFM94197.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|306864507|gb|EFM96414.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
 gi|306866667|gb|EFM98526.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
 gi|306868857|gb|EFN00663.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
 gi|306871022|gb|EFN02755.1| Exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
          Length = 280

 Score =  200 bits (507), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 80/267 (29%), Positives = 128/267 (47%), Gaps = 8/267 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A I+++ PD++ LQE K  D++FP++ +  L YH+   GQK
Sbjct: 14  MKFISFNINGLRARPHQLEAIIEKHQPDVLGLQEIKVADEDFPWDLVNHLGYHVFHHGQK 73

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122
            + GVA+L+K +P+ +    P D+ D Q R I A        L + N Y P G   +  T
Sbjct: 74  GHYGVALLTKKEPLAVRKGFPTDNADAQKRMIMADIETEFGVLTVLNGYFPQGENRSHET 133

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  +      +    L  E P++  GD NI P               + +    F 
Sbjct: 134 KFPAKEKFYADLQHYLESELSPENPIVIMGDMNISPTDLDIGIGEPNRKRWLRDGKCSFL 193

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+   +L + G  D  RA +   +  +S++DY +  +  N+G+RID ++ S      
Sbjct: 194 PEEREWLDRLYSYGLIDTFRAMNPQANDKFSWFDYRSKGFDDNRGLRIDLVLASKGLAER 253

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262
                ID + R   KPSDH+PV     
Sbjct: 254 CVETGIDLEIRAMEKPSDHSPVWAVFK 280


>gi|117925756|ref|YP_866373.1| exodeoxyribonuclease III [Magnetococcus sp. MC-1]
 gi|117609512|gb|ABK44967.1| Exodeoxyribonuclease III [Magnetococcus sp. MC-1]
          Length = 257

 Score =  200 bits (507), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 93/258 (36%), Positives = 140/258 (54%), Gaps = 3/258 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+  R  ++A W+ E+  D++CLQE K   + FP E  +SL +H+   GQK
Sbjct: 1   MRIATWNVNSMNVRQEHVAQWLAEDPCDLLCLQELKMVSEKFPAERFKSLGWHLLANGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVA+LS++   E        DL       +    +    +R+ N Y+P+G+ + S K
Sbjct: 61  TYNGVAVLSRFPLEE---RDVVLDLPGVDPAQKRLMAVTVNGVRVVNCYVPNGSEVGSDK 117

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W+ +   F   +L     L+  GDYNI P   D ++   W      +   R ++
Sbjct: 118 YHYKLDWLAKLQSFVQAQLASYPQLVVLGDYNIAPDDRDVHDVSFWAGKILVSPPERSAY 177

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q L  +G TDA R        +S+WDY   S+ +N G+RIDH++ SP  T+ L    ID 
Sbjct: 178 QALCGLGLTDAFRHLQPEGGYFSWWDYRLGSFQRNMGVRIDHLLSSPALTAKLTHCHIDR 237

Query: 244 KPRGWTKPSDHTPVIVSL 261
           +PRGW +PSDH PVI + 
Sbjct: 238 EPRGWERPSDHAPVIATY 255


>gi|222475141|ref|YP_002563557.1| exodeoxyribonuclease III (xthA2) [Anaplasma marginale str. Florida]
 gi|222419278|gb|ACM49301.1| exodeoxyribonuclease III (xthA2) [Anaplasma marginale str. Florida]
          Length = 315

 Score =  200 bits (507), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 91/273 (33%), Positives = 145/273 (53%), Gaps = 13/273 (4%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
            ++ + TWNVNS+R R+ +L + + E++ DI  LQETK  D  FP   L+ L Y     G
Sbjct: 39  RMIRILTWNVNSVRKRVAHLCSVLTEHHVDIALLQETKCTDDQFPLAELEDLGYKCYIHG 98

Query: 62  QKSYNGVAILSKYQPIEIVTH-------------LPGDDLDVQARFIEATFTINTQTLRI 108
           QKS NGVAILSKY  +  + +               G     +AR++E         +R+
Sbjct: 99  QKSRNGVAILSKYPIVGELCNTVFDAEEEIGTVQDTGSYSVTEARYLECLVDYQDVKVRV 158

Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168
            ++Y+P+G  + +  +  K+++++       + L  E+ L+  GDYN+ P   D Y+   
Sbjct: 159 ASVYVPNGQEVDTETFVYKLNFLRCLKARLLKLLAREDWLVIGGDYNVAPDDIDVYDAQA 218

Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
            +   CF  + R   +++ ++GFTDA R  H+    +S+W+Y   SW +N+G+RIDH++L
Sbjct: 219 LDGKLCFHPKERAGLREILHLGFTDAFRILHEGKQEFSWWNYREGSWQRNRGMRIDHLLL 278

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           SP A   L    I +  RG   PSDH PV+  L
Sbjct: 279 SPNAVDKLVECSILSSVRGLESPSDHAPVMCVL 311


>gi|241204226|ref|YP_002975322.1| exodeoxyribonuclease III Xth [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240858116|gb|ACS55783.1| exodeoxyribonuclease III Xth [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 264

 Score =  200 bits (507), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 113/267 (42%), Positives = 162/267 (60%), Gaps = 5/267 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+NVN I  R+  L  W+KE+ PD++CLQE KT+D  FP + ++   Y     GQ+
Sbjct: 1   MKIATYNVNGINGRLDILLRWLKEDVPDVVCLQELKTDDAGFPRKEIERAGYGAIWHGQR 60

Query: 64  SYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           S+NGVAIL+K   PI     LPGD  D  +R+IEA        + +G LYLP+GNP    
Sbjct: 61  SWNGVAILAKGKTPILTRRGLPGDPDDTHSRYIEAAVDG----ILVGCLYLPNGNPFPGA 116

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           K++ K+ W +R   +A++ LEL  P I AGD+N++P   D Y P  W +DA F  EVR++
Sbjct: 117 KFEYKLRWFRRLQDYAAELLELGVPSILAGDFNVMPTEIDVYKPERWLDDALFRPEVRKA 176

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           +  L   G+TDA+R  H    +Y+FW Y+ +S+ ++ G+RIDH +LSP    LL  A + 
Sbjct: 177 YAHLVAQGWTDAVRHLHPEERIYTFWRYWRNSFERDAGLRIDHFLLSPAVAPLLRWATVR 236

Query: 243 TKPRGWTKPSDHTPVIVSLDIPEPRKK 269
            KPRGW   SDH PV++ LD+ E    
Sbjct: 237 KKPRGWEHTSDHAPVMIELDVSEAGAD 263


>gi|295699065|ref|YP_003606958.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1002]
 gi|295438278|gb|ADG17447.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1002]
          Length = 269

 Score =  200 bits (507), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 104/272 (38%), Positives = 153/272 (56%), Gaps = 5/272 (1%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           M+ + +AT+N+N IR+R   L  W++   PD++CLQE K  D  FP + L+   Y     
Sbjct: 1   MAKLRIATFNINGIRSRQAALLQWLEREAPDVVCLQELKAVDSAFPVDALREAGYGSVWQ 60

Query: 61  GQKSYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
           GQ ++NGVAIL+K   P+E    LPG + D  +R+IEA        + I  LYLP+GNP 
Sbjct: 61  GQSAWNGVAILAKGDAPLERRRGLPGFEDDTHSRYIEAAVGG----VLIVCLYLPNGNPQ 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K+D K++W    +  A+Q  E   P++ AGD+N++P   D YNP  W  DA    E 
Sbjct: 117 PGPKFDYKLAWFDHLIAHAAQLYESGHPVVIAGDFNVVPTDEDIYNPRSWLKDALLQPES 176

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R+ ++KL   G+TDA+R       +Y+FWDY+   W  N G+RIDH++LS +    L +A
Sbjct: 177 RERYRKLLAQGWTDALRTHFGDERVYTFWDYFRRHWDTNSGLRIDHLLLSADLAPRLRNA 236

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271
            +D    G    SDH P  + L++   RKK+ 
Sbjct: 237 GVDRWVCGEPHASDHAPTWIELEMGAGRKKKS 268


>gi|94971952|ref|YP_593992.1| exodeoxyribonuclease III (xth) [Deinococcus geothermalis DSM 11300]
 gi|94554003|gb|ABF43918.1| exodeoxyribonuclease III (xth) [Deinococcus geothermalis DSM 11300]
          Length = 254

 Score =  200 bits (507), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 80/258 (31%), Positives = 138/258 (53%), Gaps = 8/258 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+NS+  R+  +   ++ + PD++ LQETK  D+ FP E L++L Y     GQK
Sbjct: 1   MKLATWNINSLNVRLPQV---LETHRPDVLALQETKVVDERFPLEPLEALGYAAAFAGQK 57

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YN V +L++     +   +PG + + +   +          +R+  LY+P+G    S K
Sbjct: 58  TYNSVDLLARAPLEAVQMGIPGLEDEQRRVLVATVGG-----VRVVCLYVPNGQAPHSEK 112

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K++W+     +    L   E L   GD+N+ P+  D +NP  W      +   R++F
Sbjct: 113 YHYKLAWLDAAHAWLRDELAAHERLAVLGDFNVAPEDRDVHNPKRWAGQVLVSGPEREAF 172

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + L ++GF DA R   +     S+W+Y A ++ +N G+RIDH+++SP    +  +  +D 
Sbjct: 173 RGLLDVGFQDAFRLFEEPPGALSWWNYGALAFPRNWGLRIDHVLVSPALAQVCQACWVDR 232

Query: 244 KPRGWTKPSDHTPVIVSL 261
           +PR   +PSDH PV+   
Sbjct: 233 EPRAHERPSDHAPVVAEF 250


>gi|94313832|ref|YP_587041.1| exodeoxyribonuclease III [Cupriavidus metallidurans CH34]
 gi|93357684|gb|ABF11772.1| Exodeoxyribonuclease III [Cupriavidus metallidurans CH34]
          Length = 283

 Score =  200 bits (507), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 104/275 (37%), Positives = 158/275 (57%), Gaps = 5/275 (1%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           M  + +AT+N+N I AR+ +L AW++   PD+ CLQE K  D++FP   L +  Y     
Sbjct: 1   MGHLKIATFNINGIHARLPSLLAWLEREQPDVACLQELKAVDESFPVAELHAAGYGAVWQ 60

Query: 61  GQKSYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
           GQKS+NGVAIL+K   P+E+   LPGD  D Q+R+IEA        + +  LYLP+GNP 
Sbjct: 61  GQKSWNGVAILAKGSDPVEVRRGLPGDAADTQSRYIEAAVAG----VLVACLYLPNGNPQ 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K++ K++W +R +R AS       P++ AGD+N++P   D YNP  W  DA      
Sbjct: 117 PGPKFEYKLAWFERLIRHASTLYASGHPVVLAGDFNVVPTDDDIYNPRSWLKDALLQPAS 176

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R+ +++L   G+TDA+R  +    +Y+FWDY+   W K+ G+RIDH++LS      +  A
Sbjct: 177 RECYRQLLEQGWTDALRTRYPDTRIYTFWDYFRQHWQKDSGLRIDHLLLSRSLAQHMRDA 236

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDST 274
            +D   RG    SDH P  V +++    + +  +T
Sbjct: 237 GVDKWVRGEPHASDHAPAWVEIEMGAEAEARTKTT 271


>gi|15599367|ref|NP_252861.1| nuclease [Pseudomonas aeruginosa PAO1]
 gi|107103689|ref|ZP_01367607.1| hypothetical protein PaerPA_01004760 [Pseudomonas aeruginosa PACS2]
 gi|218889499|ref|YP_002438363.1| putative nuclease [Pseudomonas aeruginosa LESB58]
 gi|254237052|ref|ZP_04930375.1| hypothetical protein PACG_03084 [Pseudomonas aeruginosa C3719]
 gi|254242856|ref|ZP_04936178.1| hypothetical protein PA2G_03623 [Pseudomonas aeruginosa 2192]
 gi|9950380|gb|AAG07559.1|AE004833_10 probable nuclease [Pseudomonas aeruginosa PAO1]
 gi|126168983|gb|EAZ54494.1| hypothetical protein PACG_03084 [Pseudomonas aeruginosa C3719]
 gi|126196234|gb|EAZ60297.1| hypothetical protein PA2G_03623 [Pseudomonas aeruginosa 2192]
 gi|218769722|emb|CAW25482.1| probable nuclease [Pseudomonas aeruginosa LESB58]
          Length = 266

 Score =  200 bits (507), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 104/270 (38%), Positives = 156/270 (57%), Gaps = 5/270 (1%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           M  + +AT+NVN I+ R+  L AW++   PDI+CLQE KT D  FP   L+   Y     
Sbjct: 1   MDTLKIATFNVNGIQTRLAALLAWLEREAPDIVCLQELKTPDARFPAAALEKAGYGAIWQ 60

Query: 61  GQKSYNGVAILSKY-QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
           GQ ++NGVAIL++  QP+E+   LPG+  D  +R++EA        L + +LYLP+GNP 
Sbjct: 61  GQSAWNGVAILARDSQPLEVRRGLPGNASDPHSRYLEAAVDG----LLVASLYLPNGNPQ 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K+D K++W +  +R A++ +E   P++ AGD+N++P   D Y+   W+ DA    E 
Sbjct: 117 PGPKFDYKLAWFEHLIRHAAELMESGHPVVLAGDFNVVPSDFDIYDTRSWKKDALLQPES 176

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R+ F++L   G+ DA+R       LY+FWDY+   W ++ G+RIDH++LS      L  A
Sbjct: 177 RECFERLLRQGWVDALRQRFPDRRLYTFWDYFRQHWQRDAGLRIDHLLLSASLADHLEDA 236

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKK 269
            +D   RG    SDH P  VSL  P   ++
Sbjct: 237 GVDRWVRGEEHASDHAPAWVSLRRPSEPRR 266


>gi|255034710|ref|YP_003085331.1| exodeoxyribonuclease III Xth [Dyadobacter fermentans DSM 18053]
 gi|254947466|gb|ACT92166.1| exodeoxyribonuclease III Xth [Dyadobacter fermentans DSM 18053]
          Length = 261

 Score =  200 bits (507), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 96/258 (37%), Positives = 144/258 (55%), Gaps = 3/258 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+N+N +  R+  L  W++E  PD++CLQE K     FP   L    Y+    GQK
Sbjct: 1   MKIATYNINGVNGRLPVLLKWLEEAKPDVVCLQELKAPQDKFPERALLDAGYNSIWHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVAILSK  PI+ V           +             + +  LYLP+GNP    K
Sbjct: 61  MWNGVAILSKDLPIQEVR---NSLPGDDSDLHSRYIEAIVGRMLVCCLYLPNGNPAPGPK 117

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +D K++W KR  + A   L  E P++ AGDYN+IP+  D Y P  W ++A F  E R+++
Sbjct: 118 FDYKMAWFKRLKKHAKYLLSEEVPVVLAGDYNVIPKEKDVYKPERWVDNALFFPEPRKAY 177

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           ++L   G+ D+IR  H    +Y+FWDY  +++ +N G+R+DH++LSP+    L +A +D 
Sbjct: 178 KELVGQGWIDSIRHLHPDETIYTFWDYLRNAYGRNAGLRLDHLLLSPQIAPRLVAAGVDK 237

Query: 244 KPRGWTKPSDHTPVIVSL 261
             RGW K SDH P  + L
Sbjct: 238 HVRGWEKSSDHAPTWIIL 255


>gi|226941364|ref|YP_002796438.1| XthA [Laribacter hongkongensis HLHK9]
 gi|226716291|gb|ACO75429.1| XthA [Laribacter hongkongensis HLHK9]
          Length = 255

 Score =  200 bits (507), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 87/258 (33%), Positives = 128/258 (49%), Gaps = 3/258 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS++ R+  +  W+  N  D++CLQE K E   FP   +++  Y     GQK
Sbjct: 1   MQLATWNVNSLKVRLPQVLDWLGSNPVDVLCLQELKLEQDKFPLADIEAAGYRAVWLGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAIL +     +    P   +                 +R+   Y  +G  + S K
Sbjct: 61  TYNGVAILVRAPLAPLE---PVAGMPGYDDPQARVIAATIDDVRVVCAYCVNGEAVDSDK 117

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W  R   + +   E    L+  GD+NI P   D Y+P  W      ++  RQ+F
Sbjct: 118 YRYKLEWFARLHAYLAAERERHPKLVLTGDFNIAPDDRDVYSPESWAGKVLCSVPERQAF 177

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             L  +G  DA R  HD    YS+WDY    + ++KG+RIDH++LS    + L +  ID 
Sbjct: 178 GDLLGLGLVDAFRQLHDGDGHYSWWDYRQGMFRRDKGLRIDHVLLSAPLAASLEACHIDK 237

Query: 244 KPRGWTKPSDHTPVIVSL 261
            PRGW +PSDH PV+   
Sbjct: 238 VPRGWERPSDHAPVVARF 255


>gi|284007473|emb|CBA72938.1| exodeoxyribonuclease III [Arsenophonus nasoniae]
          Length = 269

 Score =  200 bits (507), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 91/268 (33%), Positives = 129/268 (48%), Gaps = 8/268 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+NS+RARIH L A I+++ PD+I LQETK +D  FP E L  L YHI   GQK
Sbjct: 1   MKFVSFNINSLRARIHQLEAIIEKHQPDVIGLQETKVDDNAFPLEQLNQLGYHICYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122
           ++ GVA+  K +PI I    PGDD+D Q R I A        + I N Y P G       
Sbjct: 61  AHYGVALFCKQKPITIQKGFPGDDIDAQRRIIMADIETEQGIITIINGYFPQGECRDHPT 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE------NDACFT 176
           K+  K  + +    +    L  +  +I  GD NI P  HD     I            F 
Sbjct: 121 KFAAKAKFYQDLQLYLQSNLSPQSHIIIMGDMNISPTDHDIGIGEINRKRWLSAGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+   KL++ G  D  R  +      +S++DY +  +  N+G+RID I+ S    + 
Sbjct: 181 PEEREWMDKLKSWGLIDTYRQQNPEITDQFSWFDYRSKGFVDNRGLRIDLILASSSLFAC 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                ID   R   KPSDH P+    ++
Sbjct: 241 CGETGIDYDIRSMEKPSDHAPIWAKFEL 268


>gi|303258098|ref|ZP_07344106.1| exodeoxyribonuclease III [Burkholderiales bacterium 1_1_47]
 gi|330998688|ref|ZP_08322417.1| exodeoxyribonuclease III [Parasutterella excrementihominis YIT
           11859]
 gi|302859117|gb|EFL82200.1| exodeoxyribonuclease III [Burkholderiales bacterium 1_1_47]
 gi|329576427|gb|EGG57939.1| exodeoxyribonuclease III [Parasutterella excrementihominis YIT
           11859]
          Length = 265

 Score =  200 bits (507), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 87/266 (32%), Positives = 143/266 (53%), Gaps = 4/266 (1%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           MS+ T+ TWNVNS++ R   +  ++KE    I+CLQE K ++ +      + + Y ++  
Sbjct: 1   MSI-TITTWNVNSLKVRQPQVLDFLKETENSILCLQELKMQEADIDASAFKEIGYTLDAF 59

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIE---ATFTINTQTLRIGNLYLPHGN 117
           GQK+YNGVA + +     +      +    +        AT  +  + LR+ N Y P+G 
Sbjct: 60  GQKTYNGVATILRDPLTFLPDEEVRNIPGFEDPQSRLLAATVRVGCERLRVINGYFPNGE 119

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
            + S K+  K+SW++    +   +LE    L+  GD+NI P+  D ++P  W      T 
Sbjct: 120 TVESEKFPYKLSWLEALAEWLPSQLEQYPNLVLLGDFNIAPEDRDVWDPESWAESVLCTP 179

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
           + R++FQ+L ++G TD+ RA       YS+WDY   ++ +N+G+RIDHI++S    S   
Sbjct: 180 KAREAFQRLIDLGLTDSFRAFEQPEKSYSWWDYRMMAFRRNRGLRIDHILISKALVSKNL 239

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263
              I  K RG  +PSDH PV ++LD+
Sbjct: 240 GVEIHKKVRGNERPSDHAPVTLTLDL 265


>gi|116251598|ref|YP_767436.1| exodeoxyribonuclease [Rhizobium leguminosarum bv. viciae 3841]
 gi|115256246|emb|CAK07327.1| putative exodeoxyribonuclease [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 264

 Score =  200 bits (507), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 113/267 (42%), Positives = 163/267 (61%), Gaps = 5/267 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+NVN I  R+  L+ W+KE+ PD++CLQE KT+D  FP + ++   Y     GQ+
Sbjct: 1   MKIATYNVNGINGRLDILSRWLKEDTPDVVCLQELKTDDARFPRKEIERAGYGAIWHGQR 60

Query: 64  SYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           S+NGVAIL+K   PI     LPGD  D  +R+IE         + +G LYLP+GNP    
Sbjct: 61  SWNGVAILAKGKIPILTRRGLPGDPDDTHSRYIEGAVDG----ILVGCLYLPNGNPFPGA 116

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           K+D K+ W +R   +A++ LELE P I AGD+N++P   D Y P  W +DA F  EVR++
Sbjct: 117 KFDYKLRWFRRLHEYAAELLELEVPSILAGDFNVMPTEIDVYKPERWLDDALFRPEVRRA 176

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           +  L   G+TDA+R  H    +Y+FW Y+ +S+ ++ G+RIDH +LSP     L SA + 
Sbjct: 177 YADLVAQGWTDAVRHLHPEERIYTFWKYWRNSFERDAGLRIDHFLLSPAVAPWLRSATVR 236

Query: 243 TKPRGWTKPSDHTPVIVSLDIPEPRKK 269
            KPRGW   SDH PV++ LD+ +    
Sbjct: 237 KKPRGWEHTSDHAPVMIELDVSKAGAD 263


>gi|308187049|ref|YP_003931180.1| Exonuclease III [Pantoea vagans C9-1]
 gi|308057559|gb|ADO09731.1| Exonuclease III [Pantoea vagans C9-1]
          Length = 272

 Score =  199 bits (506), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 79/267 (29%), Positives = 127/267 (47%), Gaps = 8/267 (2%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           ++   ++N+N +RAR H L A ++++ PD+I LQETK  D  FP E +  L YH+   GQ
Sbjct: 4   LMKFVSFNINGLRARPHQLQALVEQHQPDVIGLQETKVHDDMFPLEEVAKLGYHVFYHGQ 63

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K + GVA+L+K QP+ +    P DD + Q R I A        + + N Y P G      
Sbjct: 64  KGHYGVALLTKAQPVSVSRGFPDDDEESQRRLIMAEIPSPIGDITVINGYFPQGESRDHP 123

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175
            K+  K  + +   R  +  L  ++P++  GD NI           +     +      F
Sbjct: 124 TKFPAKEKFYRDLQRLLTDDLPADKPVLVMGDMNISSTDLDIGIGEESRKRWLRTGKCSF 183

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R+   +L   G  D  R  +      +S++DY +  +  N+G+RID ++ S    +
Sbjct: 184 LPEEREWMDRLLGWGLVDTWREHNPEVADRFSWFDYRSKGFDDNRGLRIDLVLASKNLAA 243

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261
               + ID + RG  KPSDH P+  + 
Sbjct: 244 HCVESGIDYEIRGMEKPSDHAPIWSTF 270


>gi|86357361|ref|YP_469253.1| exodeoxyribonuclease III protein [Rhizobium etli CFN 42]
 gi|86281463|gb|ABC90526.1| exodeoxyribonuclease III protein [Rhizobium etli CFN 42]
          Length = 260

 Score =  199 bits (506), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 113/260 (43%), Positives = 163/260 (62%), Gaps = 5/260 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+NVN I  R+ N+  W+KE+ PD+ CLQE KT+D  FP + L+   Y     GQ+
Sbjct: 1   MKIATYNVNGINGRLTNVLRWLKEDGPDVACLQELKTDDARFPRKELERAGYGAVWHGQR 60

Query: 64  SYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           S+NGVAIL+K   PI     LPGD  D  +R+IEA          IG LYLP+GNP    
Sbjct: 61  SWNGVAILAKGKTPILTRRGLPGDPDDTHSRYIEAAVDGM----LIGCLYLPNGNPFPGA 116

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           K++ K+ W +R   +A++ LE+E P I AGD+N++P   D Y P  W++DA F  EVR +
Sbjct: 117 KFEYKLRWFRRLSAYAAELLEIEVPSILAGDFNVMPTEIDVYKPERWQDDALFRPEVRTA 176

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           + +L   G+TDA+R  H    +Y+FW Y+ +S+ ++ G+RIDH++LSP     L SA + 
Sbjct: 177 YAQLVAQGWTDAVRHLHPGERIYTFWKYWRNSFERDAGLRIDHLLLSPTVAPWLRSASVR 236

Query: 243 TKPRGWTKPSDHTPVIVSLD 262
            KPRGW + SDH PV++ L+
Sbjct: 237 RKPRGWEQTSDHAPVMIELE 256


>gi|90415898|ref|ZP_01223831.1| exodeoxyribonuclease III [marine gamma proteobacterium HTCC2207]
 gi|90332272|gb|EAS47469.1| exodeoxyribonuclease III [marine gamma proteobacterium HTCC2207]
          Length = 271

 Score =  199 bits (506), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 89/268 (33%), Positives = 129/268 (48%), Gaps = 9/268 (3%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64
            + ++NVN +R+R+H L A I +++PDII LQETK  D+ FP + +  L Y +   GQK 
Sbjct: 4   RIVSFNVNGLRSRLHQLEAMINQHSPDIIGLQETKVSDEEFPHQAIADLGYEVNFHGQKG 63

Query: 65  YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST-K 123
           + GVA+LSK   I I    P D  D Q R I   ++IN QT+ + N Y P G       K
Sbjct: 64  HYGVALLSKAPAINITRGYPSDGEDAQRRMIHGQYSINGQTVHVINGYFPQGESRAHPTK 123

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACFTL 177
           +  K  +    L +       ++ +   GD N+     D           I      F  
Sbjct: 124 FPAKEKFYADLLAYLDSNFNADDLVSVMGDMNVAANDIDVGIKPENAKRWIKTGKCAFLP 183

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW--SKNKGIRIDHIMLSPEATSL 235
           E RQ  Q L + G  D+ R  +     YS++DY +  +     +G+RID I+ SP    L
Sbjct: 184 EERQWLQNLLDWGLQDSFREQNAADDSYSWFDYRSKGFELEPKRGLRIDLILASPSLMKL 243

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +    IDT  RG+ KPSDH P+   L +
Sbjct: 244 VTETGIDTAARGFEKPSDHCPIWADLRL 271


>gi|269958811|ref|YP_003328599.1| exodeoxyribonuclease 3 [Anaplasma centrale str. Israel]
 gi|269848641|gb|ACZ49285.1| exodeoxyribonuclease 3 [Anaplasma centrale str. Israel]
          Length = 295

 Score =  199 bits (506), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 98/273 (35%), Positives = 143/273 (52%), Gaps = 13/273 (4%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
            ++ + TWNVNSIR R+ +L + + E+  DI  LQETK  D  FP   L+SL Y     G
Sbjct: 8   RMIRILTWNVNSIRKRVDHLRSVLSEHRIDIALLQETKCTDDQFPLAELESLGYKCYIHG 67

Query: 62  QKSYNGVAILSKYQPIEIVTH-------------LPGDDLDVQARFIEATFTINTQTLRI 108
           QKS NGVAILSKY  I  V +               G     +AR++E         +R+
Sbjct: 68  QKSRNGVAILSKYPIIGEVCNTIFDSAEGISAAQDTGSYSVTEARYLECLVDCREVKIRV 127

Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168
            ++Y+P+G  + +  +  K+++++       + LE EE ++  GDYN+ P+  D Y+   
Sbjct: 128 ASVYVPNGQEVDTETFVYKLNFLRSLKARMLKLLEGEEWIVVGGDYNVAPECMDVYDAQA 187

Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
            +   CF  E R   + +   GFTDA R  H     +S+W+Y   SW +N+G+RIDHI+L
Sbjct: 188 LDGKLCFHPEERARLRAILYSGFTDAFRVLHGGKQEFSWWNYREGSWQRNRGMRIDHILL 247

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           SP A   L    I +  RG   PSDH PV+  L
Sbjct: 248 SPNAVDRLVKCDILSSIRGLESPSDHAPVVCIL 280


>gi|188994231|ref|YP_001928483.1| exodeoxyribonuclease III [Porphyromonas gingivalis ATCC 33277]
 gi|188593911|dbj|BAG32886.1| exodeoxyribonuclease III [Porphyromonas gingivalis ATCC 33277]
          Length = 254

 Score =  199 bits (506), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 83/261 (31%), Positives = 139/261 (53%), Gaps = 12/261 (4%)

Query: 4   VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60
           + + ++NVN +RA +   L  W++E NPD++CLQETK ++  F  E  ++L Y  ++ + 
Sbjct: 1   MKIISYNVNGLRAAMKKDLIGWLREENPDVLCLQETKMQNDQFEKEEFEALGYRSYLFSA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GVAI++K+QP  I   +  ++ D + RFI A F      L I ++Y P G    
Sbjct: 61  QKKGYSGVAIITKHQPDHIEYGMGMEEYDAEGRFIRADFG----DLSIVSVYHPSG-TSG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   K+ W++ F  + ++  +    LI  GDYNI  +P D ++PI    ++ F  E R
Sbjct: 116 DERQAFKMVWLEHFQSYVNELRKSRPNLILCGDYNICHEPIDIHDPIRNAKNSGFLPEER 175

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           +   +    G+ D  R TH    LYS+W Y   + S+NKG RID+ M++      +  A 
Sbjct: 176 EWMSRFLADGYVDTFRHTHPELVLYSWWSYRFQARSRNKGWRIDYCMVTNNLADRIKGAY 235

Query: 241 IDTKPRGWTKPSDHTPVIVSL 261
           I  +       SDH P+++ +
Sbjct: 236 ILNEA----VHSDHCPIVLEI 252


>gi|34540111|ref|NP_904590.1| exodeoxyribonuclease III [Porphyromonas gingivalis W83]
 gi|34396422|gb|AAQ65489.1| exodeoxyribonuclease III [Porphyromonas gingivalis W83]
          Length = 254

 Score =  199 bits (506), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 83/261 (31%), Positives = 139/261 (53%), Gaps = 12/261 (4%)

Query: 4   VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60
           + + ++NVN +RA +   L  W++E NPD++CLQETK ++  F  E  ++L Y  ++ + 
Sbjct: 1   MKIISYNVNGLRAAMKKDLIGWLREENPDVLCLQETKMQNDQFEKEEFEALGYRSYLFSA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GVAI++K+QP  I   +  ++ D + RFI A F      L I ++Y P G    
Sbjct: 61  QKKGYSGVAIITKHQPDHIEYGMGMEEYDAEGRFIRADFG----DLSIVSVYHPSG-TSG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   K+ W++ F  + ++  +    LI  GDYNI  +P D ++PI    ++ F  E R
Sbjct: 116 DERQAFKMVWLEHFQSYVNELRKSRPNLILCGDYNICHEPIDIHDPIRNAKNSGFLPEER 175

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           +   +    G+ D  R TH    LYS+W Y   + S+NKG RID+ M++      +  A 
Sbjct: 176 EWMSRFLADGYVDTFRHTHPELVLYSWWSYRFQARSRNKGWRIDYCMVTNNLADRIKGAD 235

Query: 241 IDTKPRGWTKPSDHTPVIVSL 261
           I  +       SDH P+++ +
Sbjct: 236 ILNEA----VHSDHCPIVLEI 252


>gi|87303215|ref|ZP_01086008.1| exodeoxyribonuclease III [Synechococcus sp. WH 5701]
 gi|87282110|gb|EAQ74071.1| exodeoxyribonuclease III [Synechococcus sp. WH 5701]
          Length = 283

 Score =  199 bits (506), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 85/264 (32%), Positives = 131/264 (49%), Gaps = 3/264 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+R+R+  + AW++   P+++CLQETK ED  FP      L Y     GQK
Sbjct: 1   MQIATWNVNSVRSRLEQVVAWLELERPEVLCLQETKVEDAAFPVGAFSDLGYSAVISGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL---RIGNLYLPHGNPIT 120
           +YNGVAILS+    ++         D  A  +     + +  +   R+ NLY+P+G+ + 
Sbjct: 61  AYNGVAILSRLPLEDVRIGFDALLPDEPAVALAEQKRVISARIEGVRVLNLYVPNGSALR 120

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
           S KY  K++W+    R+   +    +P+   GD+NI     D ++P         +   R
Sbjct: 121 SEKYAYKLAWLACLERYLKVQDADGDPVCMVGDFNIALDDRDIHDPKRLSGGIMASDPER 180

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            + +   +    D  R        +S+WDY + +W ++ G RIDHI LS E         
Sbjct: 181 DALRLALDERLADVFRLFEPERGHWSWWDYRSGAWDRDSGWRIDHIYLSQELQERATGCL 240

Query: 241 IDTKPRGWTKPSDHTPVIVSLDIP 264
           I    RG  KPSDH PV+V +  P
Sbjct: 241 IHKAVRGNDKPSDHAPVVVQVQWP 264


>gi|194367742|ref|YP_002030352.1| exodeoxyribonuclease III [Stenotrophomonas maltophilia R551-3]
 gi|194350546|gb|ACF53669.1| exodeoxyribonuclease III [Stenotrophomonas maltophilia R551-3]
          Length = 258

 Score =  199 bits (506), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 88/262 (33%), Positives = 141/262 (53%), Gaps = 6/262 (2%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           M+ + +A+WNVNS+  R+ +L  W+KE  PDI+ +QETK ED  FP   L +  Y     
Sbjct: 1   MAPMKIASWNVNSLNVRLPHLEQWLKEFGPDIVGIQETKLEDHKFPDSALIAAGYRSVFA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           GQK+YNGVA+LS+    ++   +PG + + +              LR+ NLY+ +G  I 
Sbjct: 61  GQKTYNGVALLSREPAQDVQIGIPGFEDEQKRVI-----AGTFGDLRVINLYVVNGQDIG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI-IWENDACFTLEV 179
           + KY+ K+ W++    + ++ L+    LI  GD+NI P   D ++P    EN    +   
Sbjct: 116 TDKYEYKLRWLEAVHAWIAEELQRHPKLIVMGDFNIAPDARDVHDPEVWNENHILTSTAE 175

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R +  KL  +G  D  R  +D   ++S+WDY A  + ++ G+RID  ++S        ++
Sbjct: 176 RGALNKLLQLGLHDGFRLHNDEAGVFSWWDYRAAGFRRDLGLRIDLTLVSDALKGSAVAS 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261
            ID +PR W +PSDH P  V +
Sbjct: 236 GIDREPRTWERPSDHAPAWVQI 257


>gi|302525892|ref|ZP_07278234.1| exodeoxyribonuclease III [Streptomyces sp. AA4]
 gi|302434787|gb|EFL06603.1| exodeoxyribonuclease III [Streptomyces sp. AA4]
          Length = 265

 Score =  199 bits (506), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 77/265 (29%), Positives = 129/265 (48%), Gaps = 1/265 (0%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
            V VATWNVNSI  R+  +  W+    PD++CLQE K   + FP + + +  Y +   G 
Sbjct: 2   TVRVATWNVNSIVPRLPRVLDWLDNTAPDVLCLQELKNTTEAFPADEIVARGYEVAAYGL 61

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
             +NGVAILSK    ++V  LPG+          A        +R+ ++Y+P+G    + 
Sbjct: 62  GRWNGVAILSKIGLDDVVRGLPGEPGFDGKAEARAIGATCGG-IRVWSVYVPNGREPQNP 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
            Y  K+ W ++      + L    P    GD+N+ P   D ++  ++      T   R +
Sbjct: 121 HYAYKLEWFEKLSDLVGEELRHARPFAVLGDFNVAPTDEDVWDISVFAESTHVTEPERAA 180

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
            +KL++ G +D         H +++WDY A ++  NKG+RID +  +      +  + +D
Sbjct: 181 LKKLRDAGLSDVFPRPLKYDHPFTYWDYRAGNFPNNKGMRIDLVYGNEVFAKAVTDSYVD 240

Query: 243 TKPRGWTKPSDHTPVIVSLDIPEPR 267
            + R    PSDH P++V L++   R
Sbjct: 241 REARKGKGPSDHAPIVVDLELDPER 265


>gi|237743089|ref|ZP_04573570.1| exodeoxyribonuclease III [Fusobacterium sp. 7_1]
 gi|229433385|gb|EEO43597.1| exodeoxyribonuclease III [Fusobacterium sp. 7_1]
          Length = 253

 Score =  199 bits (506), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 76/263 (28%), Positives = 115/263 (43%), Gaps = 13/263 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN IRA I      +  E N DI CLQETK        E L+  + +     +
Sbjct: 1   MKLISWNVNGIRAAIKKGFLDYFNEQNADIFCLQETKLSAGQLDLE-LKGYHQYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +P+ +   L  ++ D + R I   F                   +   
Sbjct: 60  KGYSGTAIFTKQEPLSVSYGLGIEEHDKEGRVITLEFEKFYMVTVYTPNSKDELLRLDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +   R   + LE ++P++  GD N+  +  D  NP     +A FT E R  
Sbjct: 120 M------IWEDEFRKYLKNLEKKKPVVVCGDLNVAHKEIDLKNPKTNRRNAGFTDEERGK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L + GF D  R  +     +YS+W Y   +   N G RID+ ++S E    L  A I
Sbjct: 174 FTELLDSGFIDTFRYFYPNLEQVYSWWSYRGRARENNAGWRIDYFVVSKELEKNLVDAEI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLDIP 264
            T+  G    SDH PV++ LD+ 
Sbjct: 234 HTQIEG----SDHCPVVLFLDLD 252


>gi|15602556|ref|NP_245628.1| exonuclease III [Pasteurella multocida subsp. multocida str. Pm70]
 gi|12720975|gb|AAK02775.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 267

 Score =  199 bits (506), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 80/267 (29%), Positives = 122/267 (45%), Gaps = 8/267 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V ++N+N +RAR H L A I++  PD++ LQE K  D+ FP+E ++ L YH+   GQK
Sbjct: 1   MKVISFNINGLRARPHQLEAVIEKYQPDVLGLQEIKVADEMFPYELVEHLGYHVFHHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122
            + GVA+L+K  P  +    P D  + Q R I A    +   L + N Y P G      T
Sbjct: 61  GHYGVALLTKQAPKAVRKGFPTDSEEAQKRIIMADLETDFGLLTVINGYFPQGESRDHET 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  +     ++  Q      P+I  GD NI P         +     +      F 
Sbjct: 121 KFPAKEKFYADLQQYLEQDHNANNPIIIMGDMNISPTDLDIGIGDENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+   +L   G  D  R  +   +  +S++DY +  +  N+G+RIDHI+ +    + 
Sbjct: 181 PEEREWMNRLYGYGLVDTFRHLNPDVNDQFSWFDYRSKGFDDNRGLRIDHIIANHALAAR 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262
                I    R   KPSDH PV     
Sbjct: 241 CVETGIALDIRAMEKPSDHAPVWAVFK 267


>gi|163802095|ref|ZP_02195991.1| exodeoxyribonuclease III [Vibrio sp. AND4]
 gi|159174236|gb|EDP59044.1| exodeoxyribonuclease III [Vibrio sp. AND4]
          Length = 268

 Score =  199 bits (506), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 79/268 (29%), Positives = 130/268 (48%), Gaps = 9/268 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V ++N+N +RAR+H L A I ++ PD+I LQE K  D+ FP + ++++ Y +   GQK
Sbjct: 1   MKVISFNINGLRARLHQLQALIDKHQPDVIGLQEIKVHDEAFPIKDVEAMGYKVYFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121
           ++ GVA+L K +P+ +    P  ++   +   +      N + + + N Y P G+ I   
Sbjct: 61  AHYGVAMLCKQEPVSVQKGFPTDNEEHQKRMIMATFEDENGEKVTVLNGYFPQGDNIAHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175
           TKY  K  + K  + + +     +E LI  GD NI                 +      F
Sbjct: 121 TKYPYKRQFYKDLMTYLTDYHSNDEQLIVMGDINISSIDADIGIGEPNRKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R+  Q L + GF D  R  H      +S++DY +  +  N+G+RID I+ +P    
Sbjct: 181 QPEEREWLQTLLSWGFEDTFRNLHPEVDDRFSWFDYRSRGFDDNRGLRIDVILATPSLAK 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
               + ID + RG  KPSDH P+  +  
Sbjct: 241 KCIESDIDYELRGIEKPSDHAPIWSTFK 268


>gi|313109621|ref|ZP_07795568.1| putative nuclease [Pseudomonas aeruginosa 39016]
 gi|310882070|gb|EFQ40664.1| putative nuclease [Pseudomonas aeruginosa 39016]
          Length = 266

 Score =  199 bits (506), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 103/270 (38%), Positives = 156/270 (57%), Gaps = 5/270 (1%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           M  + +AT+NVN I+ R+  L AW++   PDI+CLQE KT D  FP   L+   Y     
Sbjct: 1   MDTLKIATFNVNGIQTRLAALLAWLEREAPDIVCLQELKTPDARFPAAALEKAGYGAIWQ 60

Query: 61  GQKSYNGVAILSKY-QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
           GQ ++NGVAIL++  QP+E+   LPG+  D  +R++EA        L + +LYLP+GNP 
Sbjct: 61  GQSAWNGVAILARDSQPLEVRRGLPGNASDPHSRYLEAAVDG----LLVASLYLPNGNPQ 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K+D K++W +  +R A++ +E   P++ AGD+N++P   D Y+   W+ DA    E 
Sbjct: 117 PGPKFDYKLAWFEHLIRHAAELMESGHPVVLAGDFNVVPSDFDIYDTRSWKKDALLQPES 176

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R+ F++L   G+ DA+R       +Y+FWDY+   W ++ G+RIDH++LS      L  A
Sbjct: 177 RECFERLLRQGWVDALRQRFPDRRIYTFWDYFRQHWQRDAGLRIDHLLLSASLADHLEDA 236

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKK 269
            +D   RG    SDH P  VSL  P   ++
Sbjct: 237 GVDRWVRGEEHASDHAPAWVSLRRPSEPRR 266


>gi|120401745|ref|YP_951574.1| exodeoxyribonuclease III Xth [Mycobacterium vanbaalenii PYR-1]
 gi|119954563|gb|ABM11568.1| Exodeoxyribonuclease III [Mycobacterium vanbaalenii PYR-1]
          Length = 272

 Score =  199 bits (506), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 86/270 (31%), Positives = 131/270 (48%), Gaps = 12/270 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSIRAR+  +  W++  + D++ +QETK  D  FP     +L Y I  CG  
Sbjct: 1   MRLATWNVNSIRARVDRVTDWLERADVDVLAMQETKCSDDQFPTMPFAALGYEIVHCGFN 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT-----LRIGNLYLPHGNP 118
            +NGVAI S+    ++     G         +EA             +R+ +LY+P+G  
Sbjct: 61  QWNGVAIASRVGIDDVEVGFDGQPTWNDKPEVEAAAEARALGATCGGVRVWSLYVPNGRT 120

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEE--PLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
           + S  Y  K+ W+      AS  LE     P+   GD+NI P   D ++  ++++    T
Sbjct: 121 VDSPHYVYKLEWLAALRDTASSWLESNPSAPIALVGDWNIAPIDDDVWDISLFQDSTHVT 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
              R +F  + + GFTD +R        +++WDY    + KN+G+RID I+ SP     +
Sbjct: 181 EPERAAFNAVVDAGFTDVVRPFTPGPGTFTYWDYTQLRFPKNRGMRIDFILGSPALAERV 240

Query: 237 HSARIDTKPRGWTK-----PSDHTPVIVSL 261
             A I    R   K     PSDH PV+V L
Sbjct: 241 VHAEIARDERKTGKNRVGSPSDHAPVVVDL 270


>gi|294788414|ref|ZP_06753657.1| exodeoxyribonuclease III [Simonsiella muelleri ATCC 29453]
 gi|294483845|gb|EFG31529.1| exodeoxyribonuclease III [Simonsiella muelleri ATCC 29453]
          Length = 256

 Score =  199 bits (506), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 89/260 (34%), Positives = 130/260 (50%), Gaps = 4/260 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+  R   +  W+    PD++ LQE K E   FP   LQ + ++    GQK
Sbjct: 1   MKIATWNVNSLNVRQPQVMEWLMNEQPDVLALQELKLEQDKFPLAALQMMGWNAVWSGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVA++S+++  ++ T LP    D Q R I AT       +R+ N+Y  +G  + S K
Sbjct: 61  TYNGVALISRHELTDVQTGLPQMPNDPQRRVIVATVNG----VRVINVYCVNGEALDSPK 116

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K  W      F    L     L+  GD+NI P   D Y+P  W      + E R  F
Sbjct: 117 FAYKREWFAALTHFVRDELARYADLVLLGDFNIAPTDEDVYDPKKWHEQIHCSSEERSWF 176

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + L ++G TD +R  +     Y++WDY    + K  G+RIDHI++S      L    +DT
Sbjct: 177 KNLLDLGLTDGLRHANPIGKFYTWWDYRGAMFEKGLGLRIDHILVSDNLIDKLQQVVVDT 236

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
             R   +PSDH PV     I
Sbjct: 237 HTRANERPSDHAPVHADFQI 256


>gi|300784682|ref|YP_003764973.1| exodeoxyribonuclease III [Amycolatopsis mediterranei U32]
 gi|299794196|gb|ADJ44571.1| exodeoxyribonuclease III [Amycolatopsis mediterranei U32]
          Length = 258

 Score =  199 bits (505), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 73/260 (28%), Positives = 131/260 (50%), Gaps = 2/260 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSI  R+  +  +++E  PD++CLQE K   + FP   +++L Y +   G  
Sbjct: 1   MRIATWNVNSIVPRLPRVLGFLEETAPDVLCLQELKNTTEAFPAAEIEALGYEVAAYGLG 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGV I+S+    ++V  LPG+     A    A        +R+ ++Y+P+G    +  
Sbjct: 61  RWNGVGIVSRVGVSDVVRGLPGEPQFDGASEARAIGATCGG-VRVWSVYVPNGREPDNPH 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W+       +  +         GD+N+ P   D ++  ++      T   R++ 
Sbjct: 120 YAYKLEWLSSLHSLVASEVSDGPF-AVLGDFNVAPTDADVWDIAVFAESTHVTKPEREAL 178

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            +L+++G +D         H +++WDY A ++  NKG+RID +  +   TS +  + +D 
Sbjct: 179 ARLRDLGLSDVFPRPLKYDHPFTYWDYRAGNFPNNKGMRIDLVYGNEAFTSAVTDSYVDR 238

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
             R    PSDH P++V LD+
Sbjct: 239 NARKGKGPSDHAPIVVDLDL 258


>gi|300777930|ref|ZP_07087788.1| possible exodeoxyribonuclease III [Chryseobacterium gleum ATCC
           35910]
 gi|300503440|gb|EFK34580.1| possible exodeoxyribonuclease III [Chryseobacterium gleum ATCC
           35910]
          Length = 259

 Score =  199 bits (505), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 106/258 (41%), Positives = 154/258 (59%), Gaps = 3/258 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+NVN +  R+  L  W+KE +PDI+CLQE K   + FP + + +  Y     GQK
Sbjct: 1   MKIATYNVNGVNGRLPVLLKWLKEASPDIVCLQELKAPQERFPLQEINNAGYQAIWNGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           S+NGVAIL+K + I   T +                      + I  LYLP+GNP    K
Sbjct: 61  SWNGVAILAKNKEI---TEVQRSLPGDPDDIQSRYIEAIIDQMVICCLYLPNGNPYPGPK 117

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +D K+SW+KRF +   Q +++E P I  GD+NIIP+P D + P  WENDA + +EVR+++
Sbjct: 118 FDYKLSWLKRFKKRTDQLIKMELPAILIGDFNIIPEPIDVHKPERWENDALYRVEVRKAY 177

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + LQ  G+ D+IR+ +    +Y+FWDY   ++ +N GIR+DHI+LSP   S L S  +D 
Sbjct: 178 KDLQKKGWLDSIRSLYPGEKIYTFWDYLYKAYDRNAGIRLDHILLSPYLQSRLQSGGVDR 237

Query: 244 KPRGWTKPSDHTPVIVSL 261
           + RGW K SDH PV + L
Sbjct: 238 QVRGWEKSSDHAPVWIEL 255


>gi|197335145|ref|YP_002156399.1| exodeoxyribonuclease III [Vibrio fischeri MJ11]
 gi|197316635|gb|ACH66082.1| exodeoxyribonuclease III [Vibrio fischeri MJ11]
          Length = 268

 Score =  199 bits (505), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 79/268 (29%), Positives = 128/268 (47%), Gaps = 9/268 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V ++N+N +RAR+H L A I ++NPD+I LQE K  ++ FP E ++++ Y +   GQK
Sbjct: 1   MKVISFNINGLRARLHQLQAIIDKHNPDVIGLQEIKVHNEMFPVEAVEAMGYKVYFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121
           ++ GVA+L K +PI +        +   +   +      +   + I N Y P G+ +   
Sbjct: 61  AHYGVAMLCKQEPISVQYGFDTDTEEHQKRMIMTTHQREDGSKVTIMNGYFPQGDNVKHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175
           TK+  K  + K  +         +E +I  GD NI P               +      F
Sbjct: 121 TKFPYKRQFYKDLMTHLHTHHTNDEEIIVMGDINISPIDADIGIGEPNAKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R+  Q L++ GF D  R  H      +S++DY +  +  N+G+RID IM +P    
Sbjct: 181 QPEEREWLQTLKDWGFEDTFRNLHPEVTDQFSWFDYRSKGFVDNRGLRIDVIMATPTLAV 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
               + ID + RG  KPSDH P+  +  
Sbjct: 241 KCTESGIDYELRGIEKPSDHAPIWSTFK 268


>gi|15965402|ref|NP_385755.1| exodeoxyribonuclease III protein [Sinorhizobium meliloti 1021]
 gi|307308792|ref|ZP_07588488.1| exodeoxyribonuclease III Xth [Sinorhizobium meliloti BL225C]
 gi|307317265|ref|ZP_07596706.1| exodeoxyribonuclease III Xth [Sinorhizobium meliloti AK83]
 gi|15074583|emb|CAC46228.1| Probable exodeoxyribonuclease III [Sinorhizobium meliloti 1021]
 gi|306897353|gb|EFN28098.1| exodeoxyribonuclease III Xth [Sinorhizobium meliloti AK83]
 gi|306900798|gb|EFN31409.1| exodeoxyribonuclease III Xth [Sinorhizobium meliloti BL225C]
          Length = 264

 Score =  199 bits (505), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 110/269 (40%), Positives = 165/269 (61%), Gaps = 6/269 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+NVN +  R+  L  W++E +PD++CLQE K  D  FP + +++  Y     GQK
Sbjct: 1   MKIATYNVNGVNGRLGVLLRWLEEASPDVVCLQELKAPDPKFPVKAIEAAGYGAIWHGQK 60

Query: 64  SYNGVAILSKYQ-PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           S+NGVAIL++ + P      LPGD  D  +R+IEA          IG LYLP+GNP    
Sbjct: 61  SWNGVAILARDREPTLTRKGLPGDPDDTHSRYIEAAVEGM----VIGCLYLPNGNPYPGP 116

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           K++ K++W  R   +A++ LEL+ P+I AGDYN++P   D Y P  W NDA F +EVR +
Sbjct: 117 KFEYKLAWFHRLTAYAAELLELDVPVILAGDYNVMPTELDVYKPERWVNDALFRIEVRDA 176

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           + +L   G+TDA+R  H    +Y+FWDY+ ++++++ G+RIDH++LSP  T  L +A +D
Sbjct: 177 YHRLLEQGWTDALRQLHPGERVYTFWDYFRNAFARDAGLRIDHLLLSPHVTLRLSAAGVD 236

Query: 243 TKPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271
              RGW   SDH P  + L    P ++ Q
Sbjct: 237 RHVRGWEHTSDHAPAWIELS-DGPAEEDQ 264


>gi|259419109|ref|ZP_05743026.1| exodeoxyribonuclease III [Silicibacter sp. TrichCH4B]
 gi|259345331|gb|EEW57185.1| exodeoxyribonuclease III [Silicibacter sp. TrichCH4B]
          Length = 333

 Score =  199 bits (505), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 117/260 (45%), Positives = 161/260 (61%), Gaps = 10/260 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A++N+N I+AR++ LA W+ E  PD+  LQE K+ D+ FP E  +   Y++ET GQK
Sbjct: 1   MKIASFNINGIKARVNALADWLDEAQPDVAVLQEIKSVDEAFPREMFEERGYNVETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           S+NGVAILSK    ++   LPGDD D QAR+IEAT  +  Q +RI  LYLP+GNP+    
Sbjct: 61  SFNGVAILSKLPLEDVRRGLPGDDSDEQARWIEAT-VVGKQAIRICGLYLPNGNPVALND 119

Query: 124 ---------YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
                    Y  K+ W++R    A++ +  E P + AGDYNIIPQ  D   P  W  DA 
Sbjct: 120 DGTPVAGGKYAYKLGWMERLKARAAELMAEEMPALMAGDYNIIPQAEDAKRPEAWREDAL 179

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
              E R +FQ++ N+GFT+A RA       Y+FWDY A +W+++ GIRIDH +L+P+A  
Sbjct: 180 HRPESRAAFQRIVNLGFTEAFRARTRGPGHYTFWDYQAGAWNRDDGIRIDHFLLTPQAAD 239

Query: 235 LLHSARIDTKPRGWTKPSDH 254
           LL   +ID   RG  KPSDH
Sbjct: 240 LLRDCQIDKDIRGREKPSDH 259


>gi|109898960|ref|YP_662215.1| exodeoxyribonuclease III [Pseudoalteromonas atlantica T6c]
 gi|109701241|gb|ABG41161.1| Exodeoxyribonuclease III [Pseudoalteromonas atlantica T6c]
          Length = 269

 Score =  199 bits (505), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 79/268 (29%), Positives = 131/268 (48%), Gaps = 9/268 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N IRAR+H L A I ++ PDII LQE K  +  FP   ++++ Y++   GQK
Sbjct: 1   MKIISFNINGIRARLHQLQALIDKHQPDIIGLQEIKVHNDMFPVADVEAMGYNVYFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLD-VQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121
           ++ GVA+L K +P ++    P DD D  +   + +    N +T+R+ N Y P G   +  
Sbjct: 61  AHYGVAMLCKKEPTDVQYGFPTDDEDAQRRMIMVSYPMPNGETVRVLNGYFPQGENRSHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175
           TK+  K  + +    + +     ++ +I  GD NI                 +      F
Sbjct: 121 TKFPAKRKYYEDLSTYLNTHHTPDDNVIVMGDVNISHTDLDIGIGEPNRKRWLQTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R     L + GFTD  R  +   +  +S++DY +  +  N+G+RID I+ + +   
Sbjct: 181 LPEERVWLNDLIDWGFTDGFRTLNPETNEHFSWFDYRSKGFLDNRGLRIDLILATKKLHE 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
            L  A ID + RG  KPSDH P+     
Sbjct: 241 SLTDAGIDYELRGIEKPSDHAPIWAEFK 268


>gi|323497693|ref|ZP_08102709.1| exonuclease III [Vibrio sinaloensis DSM 21326]
 gi|323317276|gb|EGA70271.1| exonuclease III [Vibrio sinaloensis DSM 21326]
          Length = 268

 Score =  199 bits (505), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 79/268 (29%), Positives = 133/268 (49%), Gaps = 9/268 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V ++N+N +RAR+H L A I ++ PD+I LQE K  D+ FP E ++++ Y +   GQK
Sbjct: 1   MKVISFNINGLRARLHQLQAVIDKHQPDVIGLQEIKVHDEAFPIEDVEAMGYKVYFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121
           ++ GVA+L K +PI +    P  ++   +   +      N + + I N Y P G+ I+  
Sbjct: 61  AHYGVAMLCKKEPISVQKGFPTDNEDHQKRMIMVTVEDDNGEKVTILNGYFPQGDNISHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175
           TKY  K  + K  + + +     +E L+  GD NI P               +      F
Sbjct: 121 TKYPYKRQFYKDLMTYLNDHHSNDEQLVVMGDINISPLDADIGIGEPNRKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R+  + L + GF D  R  H   +  +S++DY +  +  N+G+RID ++ + +   
Sbjct: 181 QPEEREWLKTLLDWGFVDTFRQIHPDANDRFSWFDYRSKGFPDNRGLRIDVVLATAKLAE 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
               + ID + RG  KPSDH P+  +  
Sbjct: 241 KCIESDIDYELRGIEKPSDHAPIWSTFK 268


>gi|190150302|ref|YP_001968827.1| exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|189915433|gb|ACE61685.1| exodeoxyribonuclease III [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
          Length = 275

 Score =  199 bits (505), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 80/267 (29%), Positives = 128/267 (47%), Gaps = 8/267 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A I+++ PD++ LQE K  D++FP++ +  L YH+   GQK
Sbjct: 9   MKFISFNINGLRARPHQLEAIIEKHQPDVLGLQEIKVADEDFPWDLVNHLGYHVFHHGQK 68

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122
            + GVA+L+K +P+ +    P D+ D Q R I A        L + N Y P G   +  T
Sbjct: 69  GHYGVALLTKKEPLAVRKGFPTDNADAQKRMIMADIETEFGVLTVLNGYFPQGENRSHET 128

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  +      +    L  E P++  GD NI P               + +    F 
Sbjct: 129 KFPAKEKFYADLQHYLESELSPENPIVIMGDMNISPTDLDIGIGEPNRKRWLRDGKCSFL 188

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+   +L + G  D  RA +   +  +S++DY +  +  N+G+RID ++ S      
Sbjct: 189 PEEREWLDRLYSYGLIDTFRAMNPQANDKFSWFDYRSKGFDDNRGLRIDLVLASKGLAER 248

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262
                ID + R   KPSDH+PV     
Sbjct: 249 CVETGIDLEIRAMEKPSDHSPVWAVFK 275


>gi|1944175|dbj|BAA19649.1| exonuclease III [Aggregatibacter actinomycetemcomitans]
          Length = 267

 Score =  199 bits (505), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 79/267 (29%), Positives = 122/267 (45%), Gaps = 8/267 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +RAR H L   I +  PD++ LQE K  D+ FP++ +  L YH+   GQK
Sbjct: 1   MKIMSFNINGLRARPHQLEEIINKYQPDVLGLQEIKVSDEVFPYDLVDHLGYHVNHFGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122
            + GVA+LSK  P+ +    P DD + Q R I          L + N Y P G       
Sbjct: 61  GHYGVALLSKQVPLSVRKGFPTDDEEAQKRIIMIDLETKFGQLTVINGYFPQGESREHPT 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  +     R+  Q    + P+I  GD NI P         +     +      F 
Sbjct: 121 KFPAKQKFYADLQRYLEQDHNAQNPVIIMGDMNISPSDLDIGIGEENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+ +Q+L   G  D  R  + T +  +S++DY +  +  N+G+RIDHI+ +    + 
Sbjct: 181 PEEREWYQRLYAYGLEDTFRHMNPTVNDKFSWFDYRSKGFDDNRGLRIDHILANKALVAH 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262
                I    R   KPSDH P+     
Sbjct: 241 CVDTGIALDIRAMNKPSDHAPIWAEFK 267


>gi|260495692|ref|ZP_05815815.1| exodeoxyribonuclease III [Fusobacterium sp. 3_1_33]
 gi|260196757|gb|EEW94281.1| exodeoxyribonuclease III [Fusobacterium sp. 3_1_33]
          Length = 253

 Score =  199 bits (505), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 74/263 (28%), Positives = 114/263 (43%), Gaps = 13/263 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN IRA I      +  E N DI CLQETK        E L+  + +     +
Sbjct: 1   MKLISWNVNGIRAAIKKGFLDYFNEQNADIFCLQETKLSAGQLDLE-LKGYHQYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +P+ +   L  ++ D + R I   F                   +   
Sbjct: 60  KGYSGTAIFTKQEPLSVSYGLGIEEHDKEGRVITLEFEKFYMVTVYTPNSKDELLRLDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +   R   + LE ++P++  GD N+  +  D  NP     +A FT E R  
Sbjct: 120 M------VWEDEFRKYLKNLEKKKPVVACGDLNVAHKEIDLKNPKTNRRNAGFTDEERGK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L + GF D  R  +     +YS+W Y   +   N G RID+ ++S      L  A I
Sbjct: 174 FTELLDSGFIDTFRYFYPNLEQVYSWWSYRGRARENNAGWRIDYFVVSKGLEKNLVDAEI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLDIP 264
            T+  G    SDH PV++ L++ 
Sbjct: 234 HTQIEG----SDHCPVVLFLNLD 252


>gi|254523139|ref|ZP_05135194.1| exodeoxyribonuclease III [Stenotrophomonas sp. SKA14]
 gi|219720730|gb|EED39255.1| exodeoxyribonuclease III [Stenotrophomonas sp. SKA14]
          Length = 260

 Score =  199 bits (505), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 88/260 (33%), Positives = 138/260 (53%), Gaps = 6/260 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A+WNVNS+  R+ +L  W+K   PDI+ +QETK ED  FP   L +  Y     GQK
Sbjct: 1   MKIASWNVNSLNVRLPHLEQWLKAFGPDIVGIQETKLEDHKFPDSALIAAGYRSVFAGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVA+LS+    ++   +PG + + +              LR+ NLY+ +G  I + K
Sbjct: 61  TYNGVALLSREPAQDVQIGIPGFEDEQKRVI-----AGTFGDLRVINLYVVNGQDIGTDK 115

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI-IWENDACFTLEVRQS 182
           YD K+ W++    + ++ L+    LI  GD+NI P   D ++P    EN    +   R +
Sbjct: 116 YDYKLRWLEAVHAWIAEELQRHPKLIVMGDFNIAPDARDVHDPEVWNENHILTSTAERGA 175

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
             KL  +G  D  R  +D    +S+WDY A  + +N G+RID  ++S        ++ ID
Sbjct: 176 LNKLLQLGLHDGFRLHNDEAGTFSWWDYRAAGFRRNLGLRIDLTLVSDALKGSAVASGID 235

Query: 243 TKPRGWTKPSDHTPVIVSLD 262
            +PR W +PSDH P  V ++
Sbjct: 236 REPRTWERPSDHAPAWVEVE 255


>gi|152979045|ref|YP_001344674.1| exodeoxyribonuclease III [Actinobacillus succinogenes 130Z]
 gi|150840768|gb|ABR74739.1| exodeoxyribonuclease III [Actinobacillus succinogenes 130Z]
          Length = 266

 Score =  199 bits (505), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 79/265 (29%), Positives = 123/265 (46%), Gaps = 7/265 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V ++N+N +RAR H L   I  + PDI+ LQE K  D+ FP+E +  L YH+   GQK
Sbjct: 1   MKVISFNINGLRARPHQLEQIIDIHRPDILGLQEIKVADEQFPYEIVADLGYHVFHYGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            + GVA+L+K +P  +    P D  + Q R I A F  +  +L + N Y P G       
Sbjct: 61  GHYGVALLTKQEPKAVRRGFPTDSEEAQRRIIMADFDTDFGSLTVINGYFPQGESRAHET 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFTL 177
                +     LR         + ++  GD NI P         +     +      F  
Sbjct: 121 KFPAKAKFYADLRRYVAEDLPCDNVVIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLP 180

Query: 178 EVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
           E R+ +Q L ++G  D  R  + T    +S++DY +  +++N+G+RIDHI+ + +     
Sbjct: 181 EEREWYQHLYDLGLEDTFRKLNPTASDKFSWFDYRSKGFNENRGLRIDHILANTKLAEHC 240

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSL 261
               ID   R   KPSDH P+    
Sbjct: 241 TETGIDLTIRAMEKPSDHAPIWAVF 265


>gi|59712190|ref|YP_204966.1| exonuclease III [Vibrio fischeri ES114]
 gi|59480291|gb|AAW86078.1| exonuclease III [Vibrio fischeri ES114]
          Length = 268

 Score =  199 bits (505), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 80/268 (29%), Positives = 128/268 (47%), Gaps = 9/268 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V ++N+N +RAR+H L A I ++NPD+I LQE K  ++ FP E ++++ Y +   GQK
Sbjct: 1   MKVISFNINGLRARLHQLQAIIDKHNPDVIGLQEIKVHNEMFPVEAVEAMGYKVYFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121
           ++ GVA+L K +PI +        +   +   +      +   + I N Y P G+ I   
Sbjct: 61  AHYGVAMLCKQEPISVQYGFDTDTEEHQKRMIMTTHQREDGSKVTIMNGYFPQGDNIKHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175
           TK+  K  + K  +         +E +I  GD NI P               +      F
Sbjct: 121 TKFPYKRQFYKDLMTHLHTHHTNDEEIIVMGDINISPIDADIGIGEPNAKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R+  Q L++ GF D  R  H      +S++DY +  +  N+G+RID IM +P    
Sbjct: 181 QPEEREWLQTLKDWGFEDTFRNLHPEVTDQFSWFDYRSKGFVDNRGLRIDVIMATPTLAV 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
               + ID + RG  KPSDH P+  +  
Sbjct: 241 KCTESGIDYELRGIEKPSDHAPIWSTFK 268


>gi|113867383|ref|YP_725872.1| exonuclease III [Ralstonia eutropha H16]
 gi|113526159|emb|CAJ92504.1| Exonuclease III [Ralstonia eutropha H16]
          Length = 276

 Score =  199 bits (505), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 84/263 (31%), Positives = 133/263 (50%), Gaps = 6/263 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENN-----PDIICLQETKTEDKNFPFETLQSLNYHIE 58
           + +A+WNVNS++ R+  +  W+ E +      D +CLQE K  D  +P   L++  +H  
Sbjct: 12  LRIASWNVNSLKVRLPQVLQWLAEQDQTGAPIDALCLQELKLPDDKYPLAELENAGFHSI 71

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
             GQK+YNGVAIL++   +     +  +    +              LR+   Y P+G  
Sbjct: 72  YTGQKTYNGVAILARDASMPGPADVVRNIPGFEDAQQRVIAATYGD-LRLVCAYFPNGQA 130

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
             S K+  K+ W+     +  + ++    L   GD+NI P+  D ++P  WE     + +
Sbjct: 131 PDSDKFVYKLKWLDAMTAWLREEMKRYPKLALLGDFNIAPEDRDVHDPKKWEGQNLVSPQ 190

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
            R +F  L  +G  DA R        +S+WDY   ++ +N G+RIDHI+LSP  TS   +
Sbjct: 191 ERAAFAALVELGLADAFRQFEQPEKAFSWWDYRMMAFRRNAGLRIDHILLSPALTSGCSA 250

Query: 239 ARIDTKPRGWTKPSDHTPVIVSL 261
             ID  PR W +PSDHTPV+ +L
Sbjct: 251 CVIDRVPRTWEQPSDHTPVVATL 273


>gi|256028521|ref|ZP_05442355.1| exodeoxyribonuclease III [Fusobacterium sp. D11]
 gi|289766441|ref|ZP_06525819.1| exodeoxyribonuclease III [Fusobacterium sp. D11]
 gi|289717996|gb|EFD82008.1| exodeoxyribonuclease III [Fusobacterium sp. D11]
          Length = 253

 Score =  198 bits (504), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 74/263 (28%), Positives = 114/263 (43%), Gaps = 13/263 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN IRA I      +  E N DI CLQETK        E L+  + +     +
Sbjct: 1   MKLISWNVNGIRAAIKKGFLDYFNEQNADIFCLQETKLSAGQLDLE-LKGYHQYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +P+ +   L  ++ D + R I   F                   +   
Sbjct: 60  KGYSGTAIFTKQEPLSVSYGLGIEEHDKEGRVITLEFEKFYMVTVYTPNSKDELLRLDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +   R   + LE ++P++  GD N+  +  D  NP     +A FT E R  
Sbjct: 120 M------IWEDEFRKYLKNLEKKKPVVVCGDLNVAHKEIDLKNPKTNRRNAGFTDEERGK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L + GF D  R  +     +YS+W Y   +   N G RID+ ++S      L  A I
Sbjct: 174 FTELLDSGFIDTFRYFYPNLEQVYSWWSYRGRARENNAGWRIDYFVVSKGLEKNLVDAEI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLDIP 264
            T+  G    SDH PV++ L++ 
Sbjct: 234 HTQIEG----SDHCPVVLFLNLD 252


>gi|304413776|ref|ZP_07395220.1| exonuclease III [Candidatus Regiella insecticola LSR1]
 gi|304283867|gb|EFL92261.1| exonuclease III [Candidatus Regiella insecticola LSR1]
          Length = 271

 Score =  198 bits (504), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 86/266 (32%), Positives = 122/266 (45%), Gaps = 8/266 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RA  H LAA I ++ PDII LQETK  D  FP   +    YHI   GQK
Sbjct: 1   MKFVSFNINGLRAHFHQLAAIITQHQPDIIGLQETKVHDDMFPLAEISQYGYHIYYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122
            + GVA+L K QP+ +    P DD D Q R I          L + N Y P G       
Sbjct: 61  GHYGVALLIKQQPLAVRRGFPTDDADAQRRIIMVDVATPQGNLTVINGYFPQGENRNHPT 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE------NDACFT 176
           K+  K  +      +  Q    ++ L+  GD NI P   D       +          F 
Sbjct: 121 KFPAKAKFYSDLQHYLEQHFTPDDQLLIMGDLNICPTELDIGIGSDNQKRWLRSGKCAFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R    +LQN G  D  R+ +   +  +S++DY +  + +N+G+RID ++ S    S 
Sbjct: 181 PEERDWLARLQNWGLIDTFRSKNPECNDQFSWFDYRSRGFDENRGLRIDLLLASAPLASR 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
             +  ID + RG  KPSDH PV    
Sbjct: 241 CIATGIDYQIRGMEKPSDHAPVWSEF 266


>gi|315634109|ref|ZP_07889398.1| exodeoxyribonuclease III [Aggregatibacter segnis ATCC 33393]
 gi|315477359|gb|EFU68102.1| exodeoxyribonuclease III [Aggregatibacter segnis ATCC 33393]
          Length = 267

 Score =  198 bits (504), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 82/267 (30%), Positives = 124/267 (46%), Gaps = 8/267 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V ++N+N +RAR H L   I +  PDI+ LQE K  D+ FP+E +  L YH+   GQK
Sbjct: 1   MKVMSFNINGLRARPHQLEEIIDKYQPDILGLQEIKVADEVFPYELVDHLGYHVNHFGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122
            + GVA+LSK  P+ +    P DD + Q R I          L + N Y P G       
Sbjct: 61  GHYGVALLSKQAPLLVRKGFPTDDEEAQKRIIMIDLDTPFGQLTVINGYFPQGESREHPT 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  +     R+  Q    + P+I  GD NI P         +     +      F 
Sbjct: 121 KFPAKQKFYADLQRYLEQDHNAQNPVIIMGDMNISPSDLDIGIGEENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+ +Q+L   G  D  R  + T +  +S++DY +  ++ N+G+RIDHI+ +    + 
Sbjct: 181 PEEREWYQRLYAYGLEDTFRYLNPTVNDKFSWFDYRSKGFNDNRGLRIDHILANKALAAH 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262
              + I    R   KPSDH P+     
Sbjct: 241 CVDSGIALDIRAMDKPSDHAPIWAEFK 267


>gi|167033891|ref|YP_001669122.1| exonuclease III [Pseudomonas putida GB-1]
 gi|166860379|gb|ABY98786.1| exodeoxyribonuclease III [Pseudomonas putida GB-1]
          Length = 270

 Score =  198 bits (504), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 85/269 (31%), Positives = 132/269 (49%), Gaps = 11/269 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +  +N+N +RAR H LAA I+++ PD+I LQETK  D  FP   +Q+L YH+   GQK
Sbjct: 1   MKIVCFNINGLRARPHQLAALIEKHQPDVIGLQETKVSDDQFPLADVQALGYHVHYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122
            + GVA+LS+  P+ +      D+ D Q RFI  TF   +   + I N Y P G      
Sbjct: 61  GHYGVALLSRQAPLSLHKGFATDEDDAQRRFIWGTFPDADGNPITIMNGYFPQGESRDHP 120

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175
            K+  K  +          +   ++PL+  GD NI PQ        D     +      F
Sbjct: 121 TKFPAKQRFYSDLQALLEGQFRNDQPLLVMGDMNISPQDCDIGIGADNAKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKN--KGIRIDHIMLSPEA 232
             E R+  ++L+  G  D+ R  +      +S++DY +  +  +  +G+RID IM S   
Sbjct: 181 LPEEREWMERLKGWGLVDSFRHLYPEVTDRFSWFDYRSRGFEDDPKRGLRIDLIMASQHL 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
              + +A +D + R   KPSDH P+ + L
Sbjct: 241 VPRIKAAGVDYELRAMEKPSDHAPIWLEL 269


>gi|260772508|ref|ZP_05881424.1| exodeoxyribonuclease III [Vibrio metschnikovii CIP 69.14]
 gi|260611647|gb|EEX36850.1| exodeoxyribonuclease III [Vibrio metschnikovii CIP 69.14]
          Length = 270

 Score =  198 bits (504), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 86/268 (32%), Positives = 134/268 (50%), Gaps = 9/268 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +RAR+H L A I ++ PDII LQE K  D+ FP + ++++ YH+   GQK
Sbjct: 1   MKIVSFNINGLRARLHQLQALIDKHQPDIIGLQEIKVHDEAFPVQAVEAMGYHVYFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITS- 121
           ++ GVA+L K  P+E+    P D+ D Q R I  TF   N   + + N Y P G+ I   
Sbjct: 61  AHYGVALLCKKAPLEVQKGFPTDNDDHQKRMIIGTFLDENGDKVTVLNGYFPQGDNIHHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175
           TK+  K  + +  + + +     +E +I  GD NI P   D           +      F
Sbjct: 121 TKFPYKRQFYQDLMNYLTDYHTPDEAIIVMGDINISPIDLDIGIGEVNRQRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E RQ  Q+L + G  D  R  H +    +S++DY +  +  N+G+RID I+ +P    
Sbjct: 181 QPEERQWLQRLLDWGLEDTFRKLHPSVEDKFSWFDYRSRGFDDNRGLRIDTILATPSLAI 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
               + ID   R   KPSDH P+     
Sbjct: 241 DCVESDIDYPLRAIEKPSDHAPIWAVFK 268


>gi|90412875|ref|ZP_01220875.1| putative exodeoxyribonuclease III [Photobacterium profundum 3TCK]
 gi|90326234|gb|EAS42661.1| putative exodeoxyribonuclease III [Photobacterium profundum 3TCK]
          Length = 268

 Score =  198 bits (504), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 80/268 (29%), Positives = 133/268 (49%), Gaps = 9/268 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V ++N+N +RAR+H L A I+++ PD+I LQE K  D+ FP   ++++ Y +   GQK
Sbjct: 1   MKVISFNINGLRARLHQLQALIEKHQPDVIGLQEIKVHDEVFPLADVEAMGYKVYHHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLD-VQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121
           ++ GVA+L K +PI +    P DD D  +   +      + + + + N Y P G  ++  
Sbjct: 61  AHYGVAMLCKQEPINVQKGFPTDDEDAQRRMIMATFEQEDGKKVTVLNGYFPQGENLSHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175
           TK+  K  +    + + +     EE +I  GD NI P               +      F
Sbjct: 121 TKFPAKEKFYADLMNYLNTHHTNEEEVIVMGDINISPIDLDIGIGPANAKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
            L  R+  + L + GFTD  R  H      +S++DY +  +  N+G+RID ++ +P   +
Sbjct: 181 QLIEREWLKTLMDWGFTDTFRQLHPDVDDQFSWFDYRSKGFVDNRGLRIDVVLATPSLAA 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
               A ID + RG  KPSDH P+  +  
Sbjct: 241 RCIDAGIDYELRGIEKPSDHAPIWSTFK 268


>gi|292899632|ref|YP_003539001.1| exodeoxyribonuclease III [Erwinia amylovora ATCC 49946]
 gi|291199480|emb|CBJ46597.1| exodeoxyribonuclease III [Erwinia amylovora ATCC 49946]
          Length = 268

 Score =  198 bits (504), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 82/266 (30%), Positives = 123/266 (46%), Gaps = 8/266 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A ++++ PD+I LQETK  D  FP   + SL YH+   GQK
Sbjct: 1   MKFVSFNINGLRARPHQLQAIVEQHQPDVIGLQETKVHDDMFPLAEVASLGYHVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122
            + GVA+L K QP+ +      DD D Q R I A     +  L + N Y P G       
Sbjct: 61  GHYGVALLCKQQPVAVRRGFASDDEDAQRRIIMADIMTPSGLLTVINGYFPQGESRDHPT 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  + +    +  Q+ + +  L+  GD NI           +     +      F 
Sbjct: 121 KFPAKEKFYRDLHSYLEQQQKPDNQLLIMGDMNISSGDLDIGIGEENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+   KL N G  D  RA H   +  +S++DY +  +  N+G+RID ++ S      
Sbjct: 181 PEEREWMDKLMNWGLVDTWRAQHATINDRFSWFDYRSKGFDDNRGLRIDLVLASRPLADR 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
             +  ID   R   KPSDH P+    
Sbjct: 241 CVATGIDYDIRAMEKPSDHAPIWAEF 266


>gi|150007753|ref|YP_001302496.1| exodeoxyribonuclease [Parabacteroides distasonis ATCC 8503]
 gi|256840019|ref|ZP_05545528.1| exodeoxyribonuclease III [Parabacteroides sp. D13]
 gi|149936177|gb|ABR42874.1| exodeoxyribonuclease [Parabacteroides distasonis ATCC 8503]
 gi|256738949|gb|EEU52274.1| exodeoxyribonuclease III [Parabacteroides sp. D13]
          Length = 284

 Score =  198 bits (504), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 82/265 (30%), Positives = 138/265 (52%), Gaps = 12/265 (4%)

Query: 1   MSVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HI 57
           +  + + T+N N +RA +   L  W+ +  PD++C+QETK +   FP ET ++L Y  ++
Sbjct: 29  LEKLKIITYNTNGLRAAVGKGLPEWLAQEQPDVLCIQETKLQPDQFPSETFETLGYKSYL 88

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
            +  +K Y+GVAIL+K +P  I   +  +  D + RF+ A F      + I ++Y P G 
Sbjct: 89  FSAQKKGYSGVAILTKQEPDHIEYGMGIEKYDNEGRFLRADFG----DVSIVSVYHPSG- 143

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
                + D K+ W++ F ++  +  +    LI  GDYNI  +P D ++PI    ++ F  
Sbjct: 144 TSGDERQDFKMIWLEDFQKYVVELQKSRPNLILCGDYNICHEPIDIHDPIRNAKNSGFLP 203

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
           E R+   +  + GFTD  R  +     Y++W Y  +S SKNKG RID+ M+S      + 
Sbjct: 204 EEREWMTRFLSAGFTDTFRFLNPDKQEYTWWSYRFNSRSKNKGWRIDYCMVSDNMKPKVK 263

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLD 262
           +A I          SDH P ++ ++
Sbjct: 264 AAYILNDA----VHSDHCPAVLEIE 284


>gi|296387271|ref|ZP_06876770.1| putative exonuclease III [Pseudomonas aeruginosa PAb1]
          Length = 266

 Score =  198 bits (504), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 104/270 (38%), Positives = 156/270 (57%), Gaps = 5/270 (1%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           M  + +AT+NVN I+ R+  L AW++   PDI+CLQE KT D  FP   L+   Y     
Sbjct: 1   MDTLKIATFNVNGIQTRLAALLAWLEREAPDIVCLQELKTPDARFPAAALERAGYGAIWQ 60

Query: 61  GQKSYNGVAILSKY-QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
           GQ ++NGVAIL++  QP+E+   LPG+  D  +R++EA        L + +LYLP+GNP 
Sbjct: 61  GQSAWNGVAILARDSQPLEVRRGLPGNASDPHSRYLEAAVDG----LLVASLYLPNGNPQ 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K+D K++W +  +R A++ +E   P++ AGD+N++P   D Y+   W+ DA    E 
Sbjct: 117 PGPKFDYKLAWFEHLIRHAAELMESGHPVVLAGDFNVVPSDFDIYDTRSWKKDALLQPES 176

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R+ F++L   G+ DA+R       LY+FWDY+   W ++ G+RIDH++LS      L  A
Sbjct: 177 RECFERLLRQGWVDALRQRFPDRRLYTFWDYFRQHWQRDAGLRIDHLLLSASLADHLEDA 236

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKK 269
            +D   RG    SDH P  VSL  P   ++
Sbjct: 237 GVDRWVRGEEHASDHAPAWVSLRRPSEPRR 266


>gi|308209127|gb|ADO20908.1| exodeoxyribonuclease-2 [Saccharopolyspora spinosa]
          Length = 266

 Score =  198 bits (504), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 69/266 (25%), Positives = 121/266 (45%), Gaps = 5/266 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A+WNVNS+ AR+  L  W+    PD++C+QE K     FPF+ +  L Y +   G  
Sbjct: 1   MRIASWNVNSVGARLPKLLDWLGTAEPDVLCVQELKCAADAFPFDEVGELGYKVAAHGTG 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-----TQTLRIGNLYLPHGNP 118
            +NGVA+LS+    E+   L  +        +  T            +R+ ++Y+P+G  
Sbjct: 61  RWNGVAVLSRVGIDEVRHGLLDEPGFQVDGAMFETQEPRAIGATCGGVRVWSVYVPNGRE 120

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
           +    Y  K+ W+        + +  + P    GD+NI P   D ++   + +       
Sbjct: 121 VGHPHYAYKLRWLDALRATVIEEMAADRPFAVLGDFNICPTDADVWDIAGFADSTHVRKN 180

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
             ++   L   G     R        +++WDY A  +  N+G+RID +  + + T  +  
Sbjct: 181 EGKALAALAKPGLARVYRRAMKYDIPFTYWDYRALRFPNNQGMRIDLVYGNEKFTGAVTD 240

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIP 264
           + +D + R     SDH PV+V LD+P
Sbjct: 241 SYVDREARKGKGTSDHAPVVVDLDVP 266


>gi|53713851|ref|YP_099843.1| exodeoxyribonuclease [Bacteroides fragilis YCH46]
 gi|60682064|ref|YP_212208.1| exodeoxyribonuclease [Bacteroides fragilis NCTC 9343]
 gi|253565813|ref|ZP_04843268.1| exodeoxyribonuclease [Bacteroides sp. 3_2_5]
 gi|265764197|ref|ZP_06092765.1| exodeoxyribonuclease III [Bacteroides sp. 2_1_16]
 gi|52216716|dbj|BAD49309.1| exodeoxyribonuclease [Bacteroides fragilis YCH46]
 gi|60493498|emb|CAH08285.1| exodeoxyribonuclease [Bacteroides fragilis NCTC 9343]
 gi|251946092|gb|EES86499.1| exodeoxyribonuclease [Bacteroides sp. 3_2_5]
 gi|263256805|gb|EEZ28151.1| exodeoxyribonuclease III [Bacteroides sp. 2_1_16]
          Length = 253

 Score =  198 bits (504), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 84/261 (32%), Positives = 140/261 (53%), Gaps = 12/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60
           + + T+NVN +RA +   L  W+ E NPD++CLQETK + + +P E  ++L Y  ++ + 
Sbjct: 1   MKIITYNVNGLRAAVNKGLPEWLAEENPDVLCLQETKLQPEQYPAEAFEALGYKAYLYSA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GVAIL+K +P  I   +  ++ D + RFI A F      L + ++Y P G    
Sbjct: 61  QKKGYSGVAILTKVEPDHIEYGMGIEEYDNEGRFIRADFG----DLSVVSVYHPSG-TSG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   K+ W++ F ++ ++  +    LI  GDYNI  +P D ++P+    ++ F  E R
Sbjct: 116 DERQAFKMVWLEAFQKYVTELRKSRPNLILCGDYNICHEPIDIHDPVRNATNSGFLPEER 175

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           +   +  + GF D+ R  +     Y++W Y  +S +KNKG RID+ M+S    SLL  A 
Sbjct: 176 EWMTRFLSAGFIDSFRTLYPQKQEYTWWSYRFNSRAKNKGWRIDYCMVSEPVRSLLKEAV 235

Query: 241 IDTKPRGWTKPSDHTPVIVSL 261
           I          SDH P+ + +
Sbjct: 236 ILNNA----VHSDHCPMALEI 252


>gi|117620950|ref|YP_857462.1| exodeoxyribonuclease III [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
 gi|117562357|gb|ABK39305.1| exodeoxyribonuclease III [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
          Length = 268

 Score =  198 bits (504), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 79/265 (29%), Positives = 133/265 (50%), Gaps = 9/265 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +RAR+H L A I ++ PD+I LQE K  D+ FP   ++++ YH+E  GQK
Sbjct: 1   MKIISFNINGLRARLHQLKAIIDKHQPDVIGLQEIKVHDEAFPLADVEAMGYHVEFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLD-VQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121
           ++ GVAI+SK +P+++    P DD +  +   +      +   +++ N Y P G      
Sbjct: 61  AHYGVAIMSKQKPVKVEKGFPTDDEEAQRRMIMATFEREDGSLIKVMNGYFPQGESQDHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175
           TK+  K  + +   R+        + L+  GD NI P               + +    F
Sbjct: 121 TKFPAKQKFYEDLQRYLETHHTPSDQLVLIGDMNISPTDLDIGIGEANRKRWLRDGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
               R+  ++L+  G TD  RA + T    +S++DY +  + +N+G+RID IM S     
Sbjct: 181 LPIEREWMERLKGFGLTDTFRAANPTECERFSWFDYRSRGFDENRGLRIDLIMASDALKD 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIV 259
            +    ID + RG  KPSDH P+  
Sbjct: 241 TVTETGIDYELRGIDKPSDHAPIWA 265


>gi|225620509|ref|YP_002721766.1| exodeoxyribonuclease [Brachyspira hyodysenteriae WA1]
 gi|225215328|gb|ACN84062.1| exodeoxyribonuclease [Brachyspira hyodysenteriae WA1]
          Length = 261

 Score =  198 bits (504), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 71/265 (26%), Positives = 107/265 (40%), Gaps = 9/265 (3%)

Query: 1   MSVVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           MS++ + +WNVN IRA     L  +IK+ NPDIICLQETK  ++  P +      Y +  
Sbjct: 1   MSILKIISWNVNGIRAAYKKGLVDFIKKENPDIICLQETKAFEEQLPEDLRNIEGYELFI 60

Query: 60  CGQKS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
                    G + ++ Y  ++    +        +       ++      I N+Y P+G 
Sbjct: 61  NPADPEVKKGYSGVAIYTKLKPNKEIKNKLGSKFSDREGRILSLEFDDFTIFNVYFPNGG 120

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
                            +     +L+    +I  GD NI  +  D   P   E    F  
Sbjct: 121 KSEEHFQ--YKLSFYDEITKHLSKLKKNTNVILCGDMNIAHEAIDLARPKENEKSIGFLP 178

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
           E R+   +  N GFTD  R        YS+WD    S  KN G RID+  ++ E    + 
Sbjct: 179 EEREKITEFLNKGFTDTFRMFVKEGGHYSWWDMKTRSREKNVGWRIDYFFVNNEMAPNIK 238

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLD 262
            A I T   G    SDH P+++  D
Sbjct: 239 RADILTDVMG----SDHCPILIEWD 259


>gi|294625005|ref|ZP_06703655.1| exodeoxyribonuclease III [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292600680|gb|EFF44767.1| exodeoxyribonuclease III [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
          Length = 330

 Score =  198 bits (504), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 87/275 (31%), Positives = 146/275 (53%), Gaps = 3/275 (1%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64
            +AT+NVN I +R+ +L  W++   PDI+ LQE K+    FP + ++   Y +   G+KS
Sbjct: 7   KIATFNVNGIASRLPHLLEWLQREQPDIVGLQELKSTQSAFPEQAIRDAGYGVIWHGEKS 66

Query: 65  YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124
           +NGVA+L++      +      D                  + +  LYLP+GNP    K+
Sbjct: 67  WNGVALLARGTEPVEIRRGLPWDPRDTQS---RYLEAAIHGVVVACLYLPNGNPQPGPKF 123

Query: 125 DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ 184
           D K++W +R +R A   ++L  P+   GD+N++P   D Y+P  W  DA    E R+++Q
Sbjct: 124 DYKLAWFERLIRHAKTLVDLPHPVALIGDFNVVPTDADIYDPKGWRKDALLQPESREAYQ 183

Query: 185 KLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK 244
            L   G+TD++ A H    +Y+FWDY+   +++++G+RIDH++L+      L  A +D  
Sbjct: 184 TLLAQGWTDSLPAIHGQTPIYTFWDYFRQHFARDRGLRIDHLLLNRTLGPGLQDAGVDKW 243

Query: 245 PRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMK 279
            R   K SDH P  +S+ +P+   +    T+   K
Sbjct: 244 VRALEKASDHAPTWISVRVPDAPAEAAPDTTPVAK 278


>gi|91789279|ref|YP_550231.1| exodeoxyribonuclease III [Polaromonas sp. JS666]
 gi|91698504|gb|ABE45333.1| Exodeoxyribonuclease III [Polaromonas sp. JS666]
          Length = 272

 Score =  198 bits (504), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 106/259 (40%), Positives = 154/259 (59%), Gaps = 5/259 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+NVN I+ R+ NL +W+ + +PD++CLQE K  D  FP   L+   Y     GQ+
Sbjct: 1   MKLATFNVNGIKTRLPNLLSWLAKESPDLVCLQELKALDGVFPQAELREAGYGAVWKGQR 60

Query: 64  SYNGVAILSKY-QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           S+NGVAIL+K   P+EI   LPGD  D Q+R++EAT       + +  LYLP+GNP    
Sbjct: 61  SWNGVAILAKDSDPVEIRRELPGDPGDDQSRYLEATVNG----IIVACLYLPNGNPQPGP 116

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           K+D K++W +R  R A    +  +P+  AGD+N++P   D YNP  W  DA    E R++
Sbjct: 117 KFDYKLAWFERLNRHAQALYQSGQPVALAGDFNVVPTDFDIYNPKSWLKDALLQPESREA 176

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           + +L + G+ D++R  H    +Y+FWDY+   W KN G+RIDHI+L+ E    L +A +D
Sbjct: 177 YARLLSQGWVDSLRHLHPDERIYTFWDYFRQHWQKNSGLRIDHILLNAELAPGLKAAGVD 236

Query: 243 TKPRGWTKPSDHTPVIVSL 261
           T  R     SDH P  V L
Sbjct: 237 TWVRDEEHASDHAPTWVEL 255


>gi|319405904|emb|CBI79536.1| exodeoxyribonuclease III [Bartonella sp. AR 15-3]
          Length = 260

 Score =  198 bits (504), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 136/259 (52%), Positives = 176/259 (67%), Gaps = 1/259 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + TWN+  I+AR   L  W+K+N PD++CLQE K  D+NFP  T++ L YH+ET GQK
Sbjct: 1   MKIVTWNIAGIKARHETLCKWLKQNQPDVVCLQEIKCIDENFPRNTIEDLGYHVETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           S+NGVAILSK  P EI+  LPGD  D QAR+IEA ++ N  ++R+ +LYLP+GNPI S K
Sbjct: 61  SFNGVAILSKKIPDEIICRLPGDHNDKQARYIEAVYSTNKGSIRVASLYLPNGNPINSEK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K  W+KR    A   LE EEPLI AGDYN+IP   D  NP  W NDA F  ++R+ F
Sbjct: 121 YFYKTEWMKRLYTHAKSLLEYEEPLILAGDYNVIPTSLDAKNPQEWNNDALFLPQIREIF 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q + ++GF DAIR   DT   +SFWD+ A++W KN GIRIDH++LSPEA   L  A   T
Sbjct: 181 QCITHLGFYDAIRNVTDTP-SFSFWDFQANAWKKNNGIRIDHLLLSPEAADQLICAYSQT 239

Query: 244 KPRGWTKPSDHTPVIVSLD 262
           + RG+ KPSDH P+ V L+
Sbjct: 240 EVRGYQKPSDHIPIWVELN 258


>gi|262203673|ref|YP_003274881.1| exodeoxyribonuclease III Xth [Gordonia bronchialis DSM 43247]
 gi|262087020|gb|ACY22988.1| exodeoxyribonuclease III Xth [Gordonia bronchialis DSM 43247]
          Length = 293

 Score =  198 bits (504), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 94/291 (32%), Positives = 136/291 (46%), Gaps = 18/291 (6%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPF---ETLQSLNYHIETC 60
           + VATWNVNS++ RI  L  W+ E  PD++CLQETK  D+ F       L    Y I   
Sbjct: 1   MRVATWNVNSVKQRIPRLLPWLDERRPDVVCLQETKLSDEAFHDVLGADLAERGYAIAHH 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT-LRIGNLYLPHGNPI 119
           GQ  +NGVA+LSK    ++ T             +EA         LRI +LY+P+G   
Sbjct: 61  GQGQWNGVALLSKVGLDDVTTGFDDMPGYPDPATLEARAVSAVCGGLRIYSLYVPNGRVP 120

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
            S  Y  K++W+       ++ +      +  GD NI P   D ++P  +      T   
Sbjct: 121 DSDHYRYKLTWLAA----LAKSISEPSSTLLCGDMNIAPADADVFDPDAYVGHTHVTEPE 176

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R +      +G  D +R       ++S+WDY A  + K+ G+RID I+    AT  + +A
Sbjct: 177 RAALSAFAELGLHDVVRDRWPDSRVFSYWDYRAGMFHKDLGMRIDLILAGESATDRVAAA 236

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD----------IPEPRKKQQDSTSQNMKP 280
            +D K R  TKPSDH PVIV LD          +P P    +  +S+   P
Sbjct: 237 WVDRKARKGTKPSDHAPVIVDLDEAPDGDIGPVVPPPSNPAKRGSSKVKLP 287


>gi|291286441|ref|YP_003503257.1| exodeoxyribonuclease III [Denitrovibrio acetiphilus DSM 12809]
 gi|290883601|gb|ADD67301.1| exodeoxyribonuclease III [Denitrovibrio acetiphilus DSM 12809]
          Length = 266

 Score =  198 bits (504), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 83/267 (31%), Positives = 129/267 (48%), Gaps = 12/267 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V T+NVNSIR RIH L   I++++PDII LQETK  D+ FP E +  L YH+E  GQK
Sbjct: 1   MKVVTFNVNSIRTRIHQLEKLIEKHSPDIIGLQETKVRDEEFPVEEISRLGYHVEFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           ++ GVA++SK +P+ +    P DD + Q R I   F        I   +    +     K
Sbjct: 61  THYGVAVMSKEKPVLVQKGFPSDDSEAQRRLIMCDFGSVKF---INGYFPQGESRTHPVK 117

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY------NPIIWENDACFTL 177
           +  K  +    L + +    +++ ++  GD N+ P  +D           + +    F  
Sbjct: 118 FPAKAKFYSDLLAYLNTSFSVDDNVLLVGDMNVAPTDYDIGISPDSVKRWLKQGKTSFLP 177

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLY-SFWDYYADSWSKN--KGIRIDHIMLSPEATS 234
           E R+  + + + G TD  R        + S++DY +  + ++   G+RIDHIM +     
Sbjct: 178 EEREWIKNVADWGLTDVYRKIKPESDEFMSWFDYRSKGFERDPKSGLRIDHIMATEALAD 237

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261
                 ID + RG  KPSDH PV    
Sbjct: 238 CCVDCGIDYEIRGMEKPSDHAPVWADF 264


>gi|254854529|ref|ZP_05243877.1| exodeoxyribonuclease [Listeria monocytogenes FSL R2-503]
 gi|258607929|gb|EEW20537.1| exodeoxyribonuclease [Listeria monocytogenes FSL R2-503]
          Length = 251

 Score =  198 bits (503), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 64/262 (24%), Positives = 112/262 (42%), Gaps = 13/262 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      + +E + DI CLQETK ++     + L +   +     +
Sbjct: 1   MKLISWNVNGLRAAVKKGFLEYFEEVDADIFCLQETKLQEGQIELD-LPAYKDYWNYAVK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +P+ +       + D + R I   F                   +   
Sbjct: 60  KGYSGTAIFTKVEPLSVQYGFGVPEHDTEGRVITLEFEEFFMVTVYTPNSQAELKRLDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +  +    + L+  +P++  GD N+  +  D  NP     +A F+ E R  
Sbjct: 120 M------TFEDAILEYVKNLDKTKPVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F    + GF D+ R  +      YS+W Y  ++ ++N G RID+ ++S      L  A+I
Sbjct: 174 FSAFLDAGFIDSFRYFYPDLTDAYSWWSYRMNARARNTGWRIDYFVVSERLKDKLVDAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
                G    SDH PV + L++
Sbjct: 234 HADVLG----SDHCPVELELNL 251


>gi|16803822|ref|NP_465307.1| hypothetical protein lmo1782 [Listeria monocytogenes EGD-e]
 gi|16411236|emb|CAC99860.1| lmo1782 [Listeria monocytogenes EGD-e]
          Length = 251

 Score =  198 bits (503), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 65/262 (24%), Positives = 113/262 (43%), Gaps = 13/262 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      + +E + DI CLQETK ++     + L +   +     +
Sbjct: 1   MKLISWNVNGLRAAVKKGFLEYFEEVDADIFCLQETKLQEGQIELD-LPAYKDYWNYAVK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +P+ +   L   + D + R I   F                   +   
Sbjct: 60  KGYSGTAIFTKVEPLSVQYGLGIPEHDTEGRVITLEFEEFFMVTVYTPNSQAELKRLDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +  +    + L+  +P++  GD N+  +  D  NP     +A F+ E R  
Sbjct: 120 M------TFEDAILEYVKNLDNTKPVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F    + GF D+ R  +      YS+W Y  ++ ++N G RID+ ++S      L  A+I
Sbjct: 174 FSAFLDAGFIDSFRYFYPDLTDAYSWWSYRMNARARNTGWRIDYFVVSERLKDKLVDAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
                G    SDH PV + L++
Sbjct: 234 HADVLG----SDHCPVELELNL 251


>gi|88807632|ref|ZP_01123144.1| exodeoxyribonuclease III [Synechococcus sp. WH 7805]
 gi|88788846|gb|EAR20001.1| exodeoxyribonuclease III [Synechococcus sp. WH 7805]
          Length = 276

 Score =  198 bits (503), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 84/265 (31%), Positives = 139/265 (52%), Gaps = 4/265 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A+WNVNS+R R+ ++ +W+  +  D++ LQETK ++  FP E  +   Y +   GQK
Sbjct: 1   MQIASWNVNSVRTRLGHVLSWLDRHTIDVLALQETKVDNPLFPLEPFRERGYDVSIHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQAR----FIEATFTINTQTLRIGNLYLPHGNPI 119
           SYNGVA++S+    ++   L G+             +   +     +R+ NLY+P+G+ +
Sbjct: 61  SYNGVALISRQPLEDVRLGLTGELPGDADAEALGAQKRVISALVDGVRVVNLYVPNGSSL 120

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
            S KY  K++W+    R+       +EPL   GD+NI P+  D ++P         +   
Sbjct: 121 RSEKYSYKLNWLGCLERYLRSAEARDEPLCVVGDFNIGPEARDLHDPDRLTGGIMASEAE 180

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R++  ++      DA R        +S+WDY + +W+++ G RIDHI LS +   L  S 
Sbjct: 181 REALHQVLGSNLGDAFRLFEPGSGHWSWWDYRSGAWNRDSGWRIDHIYLSRDLQELARSC 240

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIP 264
            ID + RG  +PSDH PV+V L   
Sbjct: 241 SIDKQERGREQPSDHAPVMVDLAWD 265


>gi|329114100|ref|ZP_08242864.1| Exodeoxyribonuclease III [Acetobacter pomorum DM001]
 gi|326696639|gb|EGE48316.1| Exodeoxyribonuclease III [Acetobacter pomorum DM001]
          Length = 261

 Score =  198 bits (503), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 98/264 (37%), Positives = 136/264 (51%), Gaps = 5/264 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+R R+  +  W+K   PD++ +QE K E   FP    +   Y     GQK
Sbjct: 1   MKLATWNVNSVRQRMDLVLDWLKREQPDVLMMQEIKCETDLFPKAAFEDAGYGCAVIGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           SYNGV+ L +        HLPG               + TQ + +GNLYLP+GN      
Sbjct: 61  SYNGVSTLVRGDFSITTDHLPGFSDPAARYV-----EVRTQHIVLGNLYLPNGNSGGEQG 115

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ ++      A   L  E   + AGDYNI P P DC    +   DA    + R ++
Sbjct: 116 YATKLEFLNALTARARLLLAEETDFVLAGDYNICPAPIDCAPGALGPEDALVRPQSRAAY 175

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           ++L  +G TDA+RA H T   Y+FWDY A +W ++ G+RIDH++LSP     L +A  D 
Sbjct: 176 RRLLWLGLTDALRAVHPTGAAYTFWDYQARAWERDCGLRIDHMLLSPRLAERLQTAEPDK 235

Query: 244 KPRGWTKPSDHTPVIVSLDIPEPR 267
             R   +PSDH P IV+L  P   
Sbjct: 236 NERAMPRPSDHVPFIVTLKDPVKP 259


>gi|298481071|ref|ZP_06999265.1| exodeoxyribonuclease III [Bacteroides sp. D22]
 gi|298272645|gb|EFI14212.1| exodeoxyribonuclease III [Bacteroides sp. D22]
          Length = 254

 Score =  198 bits (503), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 81/262 (30%), Positives = 137/262 (52%), Gaps = 12/262 (4%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59
           ++ + T+NVN +RA +   L  W+ + NPDI+CLQETK +   +P E  ++L Y  ++ +
Sbjct: 1   MMKIITYNVNGLRAAVSKGLPEWLAQENPDILCLQETKLQPDQYPGEVFEALGYKSYLYS 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GVAIL+K +P  +   +  +  D + RFI A F      L + ++Y P G   
Sbjct: 61  AQKKGYSGVAILTKREPDHVEYGMGMEAYDNEGRFIRADFG----DLSVVSVYHPSG-TS 115

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +   K+ W++ F ++  +  +    LI  GDYNI  +P D ++P+    ++ F  E 
Sbjct: 116 GDERQAFKMGWLEDFQKYVMELQKSRPNLILCGDYNICHEPIDIHDPVRNATNSGFLPEE 175

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R+   +  + G+ D+ R        Y++W Y  +S +KNKG RID+ M+S     LL  A
Sbjct: 176 REWMTRFLSAGYVDSFRTLCPEKQEYTWWSYRFNSRAKNKGWRIDYCMVSEPVRPLLKRA 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261
            I  +       SDH P+ + +
Sbjct: 236 YILNEA----VHSDHCPMALEI 253


>gi|254468067|ref|ZP_05081473.1| exodeoxyribonuclease III [beta proteobacterium KB13]
 gi|207086877|gb|EDZ64160.1| exodeoxyribonuclease III [beta proteobacterium KB13]
          Length = 256

 Score =  198 bits (503), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 79/259 (30%), Positives = 136/259 (52%), Gaps = 4/259 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + +WNVNS++ R + L   I ++NPD+I LQETK++D+NFP E+  +L Y     GQK
Sbjct: 1   MKIISWNVNSLKIRHNQLVDIINKHNPDVISLQETKSQDENFPIESFNNLGYQSIFTGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           ++NGVAI++K     I+ ++P    + +          + + + I N Y P+G  + S K
Sbjct: 61  TFNGVAIITKLPFENILLNIPNFQDEQKRFVSA-EVKFDDRKIIIMNGYFPNGQSLDSDK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K SW+                 +  GD+NI P   DC++P  W      +   R  F
Sbjct: 120 FIYKQSWVNAL---LKFIKTKNSDSLLMGDFNIAPDDIDCHDPEKWVGTVLTSDIERNLF 176

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           +++    FTD  R  +     +++WDY   ++ +N G+RIDHI+ S +  + L    + +
Sbjct: 177 KEIIECNFTDTHRYLNKNEPGFTWWDYRMAAFRRNLGLRIDHILASHDLINFLKDFSVLS 236

Query: 244 KPRGWTKPSDHTPVIVSLD 262
             R   +PSDH P++++L+
Sbjct: 237 DYRKLERPSDHAPIMLTLN 255


>gi|54309891|ref|YP_130911.1| exonuclease III [Photobacterium profundum SS9]
 gi|46914330|emb|CAG21109.1| putative exodeoxyribonuclease III [Photobacterium profundum SS9]
          Length = 268

 Score =  198 bits (503), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 80/268 (29%), Positives = 132/268 (49%), Gaps = 9/268 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V ++N+N +RAR+H L A I+++ PD+I LQE K  D  FP   ++++ Y +   GQK
Sbjct: 1   MKVISFNINGLRARLHQLQALIEKHQPDVIGLQEIKVHDDAFPLADVEAMGYKVYHHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLD-VQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121
           ++ GVA+L K +P+ I    P DD D  +   +      + + + + N Y P G  ++  
Sbjct: 61  AHYGVAMLCKQEPVNIQKGFPTDDEDAQRRMIMATFEQEDGKKVTVLNGYFPQGENLSHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175
           TK+  K  +    + + +     EE +I  GD NI P               +      F
Sbjct: 121 TKFPAKEKFYADLMNYLNTHHTNEEEVIVMGDINISPIDLDIGIGPANAKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
            L  R+  + L + GFTD  R  H      +S++DY +  +  N+G+RID ++ +P   +
Sbjct: 181 QLIEREWLKTLMDWGFTDTFRQLHPDVDDQFSWFDYRSKGFVDNRGLRIDVVLATPSLAA 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
               A ID + RG  KPSDH P+  +  
Sbjct: 241 RCIDAGIDYELRGIEKPSDHAPIWSTFK 268


>gi|254994979|ref|ZP_05277169.1| exodeoxyribonuclease III (xthA2) [Anaplasma marginale str.
           Mississippi]
 gi|255003123|ref|ZP_05278087.1| exodeoxyribonuclease III (xthA2) [Anaplasma marginale str. Puerto
           Rico]
 gi|255004249|ref|ZP_05279050.1| exodeoxyribonuclease III (xthA2) [Anaplasma marginale str.
           Virginia]
          Length = 284

 Score =  198 bits (503), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 91/273 (33%), Positives = 145/273 (53%), Gaps = 13/273 (4%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
            ++ + TWNVNS+R R+ +L + + E++ DI  LQETK  D  FP   L+ L Y     G
Sbjct: 8   RMIRILTWNVNSVRKRVAHLCSVLTEHHVDIALLQETKCTDDQFPLAELEDLGYKCYIHG 67

Query: 62  QKSYNGVAILSKYQPIEIVTH-------------LPGDDLDVQARFIEATFTINTQTLRI 108
           QKS NGVAILSKY  +  + +               G     +AR++E         +R+
Sbjct: 68  QKSRNGVAILSKYPIVGELCNTVFDAEEEIGTVQDTGSYSVTEARYLECLVDYQDVKVRV 127

Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168
            ++Y+P+G  + +  +  K+++++       + L  E+ L+  GDYN+ P   D Y+   
Sbjct: 128 ASVYVPNGQEVDTETFVYKLNFLRCLKARLLKLLAREDWLVIGGDYNVAPDDIDVYDAQA 187

Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
            +   CF  + R   +++ ++GFTDA R  H+    +S+W+Y   SW +N+G+RIDH++L
Sbjct: 188 LDGKLCFHPKERAGLREILHLGFTDAFRILHEGKQEFSWWNYREGSWQRNRGMRIDHLLL 247

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           SP A   L    I +  RG   PSDH PV+  L
Sbjct: 248 SPNAVDKLVECSILSSVRGLESPSDHAPVMCVL 280


>gi|46908012|ref|YP_014401.1| exodeoxyribonuclease [Listeria monocytogenes str. 4b F2365]
 gi|47094151|ref|ZP_00231871.1| exodeoxyribonuclease [Listeria monocytogenes str. 4b H7858]
 gi|217964070|ref|YP_002349748.1| exodeoxyribonuclease III [Listeria monocytogenes HCC23]
 gi|226224385|ref|YP_002758492.1| 3'-exo-deoxyribonuclease exoA [Listeria monocytogenes Clip81459]
 gi|254826392|ref|ZP_05231393.1| exodeoxyribonuclease [Listeria monocytogenes FSL J1-194]
 gi|254933631|ref|ZP_05266990.1| exodeoxyribonuclease [Listeria monocytogenes HPB2262]
 gi|255521086|ref|ZP_05388323.1| 3'-exo-deoxyribonuclease exoA [Listeria monocytogenes FSL J1-175]
 gi|300766428|ref|ZP_07076383.1| exodeoxyribonuclease [Listeria monocytogenes FSL N1-017]
 gi|46881282|gb|AAT04578.1| exodeoxyribonuclease [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|47017476|gb|EAL08289.1| exodeoxyribonuclease [Listeria monocytogenes str. 4b H7858]
 gi|217333340|gb|ACK39134.1| exodeoxyribonuclease III [Listeria monocytogenes HCC23]
 gi|225876847|emb|CAS05556.1| Putative 3'-exo-deoxyribonuclease exoA [Listeria monocytogenes
           serotype 4b str. CLIP 80459]
 gi|293585194|gb|EFF97226.1| exodeoxyribonuclease [Listeria monocytogenes HPB2262]
 gi|293595632|gb|EFG03393.1| exodeoxyribonuclease [Listeria monocytogenes FSL J1-194]
 gi|300512852|gb|EFK39944.1| exodeoxyribonuclease [Listeria monocytogenes FSL N1-017]
 gi|307571362|emb|CAR84541.1| exodeoxyribonuclease [Listeria monocytogenes L99]
 gi|328466425|gb|EGF37573.1| exodeoxyribonuclease III [Listeria monocytogenes 1816]
          Length = 251

 Score =  198 bits (503), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 65/262 (24%), Positives = 112/262 (42%), Gaps = 13/262 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      + +E + DI CLQETK ++     +     +Y      +
Sbjct: 1   MKLISWNVNGLRAAVKKGFLEYFEEVDADIFCLQETKLQEGQIELDLPAYKDY-WNYAVK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +P+ +   L   + D + R I   F                   +   
Sbjct: 60  KGYSGTAIFTKVEPLSVQYGLGVPEHDTEGRVITLEFEEFFMVTVYTPNSQAELKRLDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +  +    + L+  +P++  GD N+  +  D  NP     +A F+ E R  
Sbjct: 120 M------TFEDAILEYVKNLDKTKPVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F    + GF D+ R  +      YS+W Y  ++ ++N G RID+ ++S      L  A+I
Sbjct: 174 FSAFLDAGFIDSFRYFYPDLTDAYSWWSYRMNARARNTGWRIDYFVVSERLKDKLVDAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
                G    SDH PV + L++
Sbjct: 234 HADVLG----SDHCPVELELNL 251


>gi|116052214|ref|YP_788942.1| putative exonuclease III [Pseudomonas aeruginosa UCBPP-PA14]
 gi|115587435|gb|ABJ13450.1| putative exonuclease III [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 266

 Score =  198 bits (503), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 103/270 (38%), Positives = 156/270 (57%), Gaps = 5/270 (1%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           M  + +AT+NVN I+ R+  L AW++   PDI+CLQE KT D  FP   L+   Y     
Sbjct: 1   MDTLKIATFNVNGIQTRLAALLAWLEREAPDIVCLQELKTPDARFPAAALERAGYGAIWQ 60

Query: 61  GQKSYNGVAILSKY-QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
           GQ ++NGVAIL++  QP+E+   LPG+  D  +R++EA        L + +LYLP+GNP 
Sbjct: 61  GQSAWNGVAILARDSQPLEVRRGLPGNASDPHSRYLEAAVDG----LLVASLYLPNGNPQ 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K+D K++W +  +R A++ +E   P++ AGD+N++P   D Y+   W+ DA    E 
Sbjct: 117 PGPKFDYKLAWFEHLIRHAAELMESGHPVVLAGDFNVVPSDFDIYDTRSWKKDALLQPES 176

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R+ F++L   G+ DA+R       +Y+FWDY+   W ++ G+RIDH++LS      L  A
Sbjct: 177 RECFERLLRQGWVDALRQRFPDRRIYTFWDYFRQHWQRDAGLRIDHLLLSASLADHLEDA 236

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKK 269
            +D   RG    SDH P  VSL  P   ++
Sbjct: 237 GVDRWVRGEEHASDHAPAWVSLRRPSEPRR 266


>gi|49082810|gb|AAT50805.1| PA4172 [synthetic construct]
          Length = 267

 Score =  198 bits (503), Expect = 7e-49,   Method: Composition-based stats.
 Identities = 103/270 (38%), Positives = 155/270 (57%), Gaps = 5/270 (1%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           M  + +AT+NVN I+ R+  L AW++   PDI+CLQE KT D  FP   L+   Y     
Sbjct: 1   MDTLKIATFNVNGIQTRLAALLAWLEREAPDIVCLQELKTPDARFPAAALEKAGYGAIWQ 60

Query: 61  GQKSYNGVAILSKY-QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
           GQ ++NGVAIL++  QP+E+   LPG+  D  +R++EA        L + +LYLP+GNP 
Sbjct: 61  GQSAWNGVAILARDSQPLEVRRGLPGNASDPHSRYLEAAVDG----LLVASLYLPNGNPQ 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K+D K++W +  +R A++ +E   P++ AGD+N++    D Y+   W+ DA    E 
Sbjct: 117 PGPKFDYKLAWFEHLIRHAAELMESGHPVVLAGDFNVVLSDFDIYDTRSWKKDALLQPES 176

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R+ F++L   G+ DA+R       LY+FWDY+   W ++ G+RIDH++LS      L  A
Sbjct: 177 RECFERLLRQGWVDALRQRFPDRRLYTFWDYFRQHWQRDAGLRIDHLLLSASLADHLEDA 236

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKK 269
            +D   RG    SDH P  VSL  P   ++
Sbjct: 237 GVDRWVRGEEHASDHAPAWVSLRRPSEPRR 266


>gi|237714559|ref|ZP_04545040.1| exodeoxyribonuclease [Bacteroides sp. D1]
 gi|262406425|ref|ZP_06082974.1| exodeoxyribonuclease III [Bacteroides sp. 2_1_22]
 gi|294643303|ref|ZP_06721129.1| exodeoxyribonuclease III [Bacteroides ovatus SD CC 2a]
 gi|229445328|gb|EEO51119.1| exodeoxyribonuclease [Bacteroides sp. D1]
 gi|262355128|gb|EEZ04219.1| exodeoxyribonuclease III [Bacteroides sp. 2_1_22]
 gi|292641426|gb|EFF59618.1| exodeoxyribonuclease III [Bacteroides ovatus SD CC 2a]
 gi|295083963|emb|CBK65486.1| exodeoxyribonuclease III [Bacteroides xylanisolvens XB1A]
          Length = 254

 Score =  198 bits (503), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 81/262 (30%), Positives = 137/262 (52%), Gaps = 12/262 (4%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59
           ++ + T+NVN +RA +   L  W+ + NPDI+CLQETK +   +P E  ++L Y  ++ +
Sbjct: 1   MMKIITYNVNGLRAAVSKGLPEWLAQENPDILCLQETKLQPDQYPGEVFEALGYKSYLYS 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GVAIL+K +P  +   +  +  D + RFI A F      L + ++Y P G   
Sbjct: 61  AQKKGYSGVAILTKREPDHVEYGMGMEAYDNEGRFIRADFG----DLSVVSVYHPSG-TS 115

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +   K+ W++ F ++  +  +    LI  GDYNI  +P D ++P+    ++ F  E 
Sbjct: 116 GDERQAFKMVWLEDFQKYVMELQKSRPNLILCGDYNICHEPIDIHDPVRNATNSGFLPEE 175

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R+   +  + G+ D+ R        Y++W Y  +S +KNKG RID+ M+S     LL  A
Sbjct: 176 REWMTRFLSAGYVDSFRTLCPEKQEYTWWSYRFNSRAKNKGWRIDYCMVSEPVRPLLKRA 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261
            I  +       SDH P+ + +
Sbjct: 236 YILNEA----VHSDHCPMALEI 253


>gi|254302413|ref|ZP_04969771.1| exodeoxyribonuclease III [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
 gi|148322605|gb|EDK87855.1| exodeoxyribonuclease III [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
          Length = 253

 Score =  198 bits (503), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 74/262 (28%), Positives = 114/262 (43%), Gaps = 13/262 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN IRA I      +  E N DI CLQETK        E L+  + +     +
Sbjct: 1   MKLISWNVNGIRAAIKKGFLDYFNEQNADIFCLQETKLSAGQLDLE-LKGYHQYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +P+ +   L  ++ D + R I   F                   +   
Sbjct: 60  KGYSGTAIFTKQEPLSVSYGLGIEEHDKEGRVITLEFEKFYMVTVYTPNSKDELLRLDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +   R   + LE ++P++  GD N+  +  D  NP     +A FT E R  
Sbjct: 120 M------VWEDEFRKYLKNLEKKKPVVVCGDLNVAHKEIDLKNPKTNRRNAGFTDEERGK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L + GF D  R  +     +YS+W Y   +   N G RID+ ++S      L  A I
Sbjct: 174 FTELLDSGFIDTFRYFYPNLEQVYSWWSYRGRARENNAGWRIDYFVVSKGLEKNLVDAEI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
            ++  G    SDH PV++ LD+
Sbjct: 234 HSQIEG----SDHCPVVLFLDL 251


>gi|111073593|emb|CAL29439.1| exodeoxyribonuclease III [Wolbachia endosymbiont of Onchocerca
           volvulus]
          Length = 259

 Score =  198 bits (503), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 95/259 (36%), Positives = 145/259 (55%), Gaps = 1/259 (0%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           ++ +ATWNVNSIR RI  +   I +N  DII LQETK  +K FP+E ++ L Y     GQ
Sbjct: 1   MLKIATWNVNSIRKRIDQICNLIIDNQIDIILLQETKCTEKQFPYEEIKKLGYKCAVYGQ 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
            + NGV +LSKY  +E    +   +   +AR+IE     + Q +R+ ++Y+P+G    S 
Sbjct: 61  VARNGVCVLSKYLILEKFK-IDIVEGYQEARYIECVVKYDNQKIRVVSIYVPNGQSPDSN 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
            +  K+ +           L+ EE  I AGDYN+     D ++PI+     CF +  R+ 
Sbjct: 120 AFAYKLKFFDNLYEKIINLLKNEELTIVAGDYNVALDGIDVFDPILLNGKVCFHIREREK 179

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
            + + N+GF DA R ++     +++W Y  +S+  N+G+RID+I+LSP+A   L +  ID
Sbjct: 180 LRAILNLGFKDAFRISNPDLQQFTWWHYQDNSFRNNQGMRIDYILLSPQAADRLETCYID 239

Query: 243 TKPRGWTKPSDHTPVIVSL 261
            K R    PSDHTPVI  +
Sbjct: 240 DKLRKLKNPSDHTPVICVI 258


>gi|300703904|ref|YP_003745506.1| exodeoxyribonuclease III [Ralstonia solanacearum CFBP2957]
 gi|299071567|emb|CBJ42891.1| EXODEOXYRIBONUCLEASE III [Ralstonia solanacearum CFBP2957]
          Length = 269

 Score =  198 bits (503), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 92/266 (34%), Positives = 140/266 (52%), Gaps = 8/266 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPD-----IICLQETKTEDKNFPFETLQSLNYHIE 58
           + VATWNVNS++ R+ ++  W+ E   D     ++CLQE K  D  +P   L +  Y   
Sbjct: 1   MRVATWNVNSLKVRLPHVLQWLAEREADATPIDLLCLQELKLPDDRYPLAELDAAGYASL 60

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDV---QARFIEATFTINTQTLRIGNLYLPH 115
             GQK+YNGVAIL++   +     +  +       Q R + AT+ +    +R+ + Y P+
Sbjct: 61  FTGQKTYNGVAILARKAAMPEGRDVVKNIPGFADEQQRIVAATYDVAGGPVRVISAYFPN 120

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
           G  + S K   K+ W+     +    +     L+  GD+NI P   D ++P  WE     
Sbjct: 121 GQALDSDKMVYKMRWLAALQDWLKAEMVAHPRLMLLGDFNIAPDDRDVHDPKKWEGMNLV 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
           + E R +F+ L++ G  DA R       L+S+WDY   ++ +N G+RIDHI+LSPE    
Sbjct: 181 SPEERAAFRALESAGLVDAFRMFDQADKLFSWWDYRLFAFRRNAGLRIDHILLSPELAQR 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
             S  ID  PRGW +PSDHTPV+ +L
Sbjct: 241 CESCHIDRVPRGWEQPSDHTPVVAAL 266


>gi|301163534|emb|CBW23085.1| exodeoxyribonuclease [Bacteroides fragilis 638R]
          Length = 253

 Score =  198 bits (503), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 84/261 (32%), Positives = 140/261 (53%), Gaps = 12/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60
           + + T+NVN +RA +   L  W+ E NPD++CLQETK + + +P E  ++L Y  ++ + 
Sbjct: 1   MKIITYNVNGLRAAVNKGLPEWLAEENPDVLCLQETKLQPEQYPAEAFEALGYKAYLYSA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GVAIL+K +P  I   +  ++ D + RFI A F      L + ++Y P G    
Sbjct: 61  QKKGYSGVAILTKVEPDHIEYGMGIEEYDNEGRFIRADFG----DLSVVSVYHPSG-TSG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   K+ W++ F ++ ++  +    LI  GDYNI  +P D ++P+    ++ F  E R
Sbjct: 116 DERQAFKMVWLEAFQKYVTELRKSRPNLILCGDYNICHEPIDIHDPVRNATNSGFLPEER 175

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           +   +  + GF D+ R  +     Y++W Y  +S +KNKG RID+ M+S    SLL  A 
Sbjct: 176 EWMTRFLSAGFIDSFRTLYPQKQEYTWWSYRFNSRAKNKGWRIDYCMVSEPVRSLLKEAV 235

Query: 241 IDTKPRGWTKPSDHTPVIVSL 261
           I          SDH P+ + +
Sbjct: 236 ILNNA----VHSDHCPMALEI 252


>gi|298385343|ref|ZP_06994901.1| exodeoxyribonuclease III [Bacteroides sp. 1_1_14]
 gi|298261484|gb|EFI04350.1| exodeoxyribonuclease III [Bacteroides sp. 1_1_14]
          Length = 254

 Score =  198 bits (503), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 82/263 (31%), Positives = 139/263 (52%), Gaps = 12/263 (4%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59
           ++ + T+NVN +RA +   L  W+ + NPDI+CLQETK +   +P E  ++L Y  ++ +
Sbjct: 1   MMKIITYNVNGLRAAVSKGLPEWLVQENPDILCLQETKLQPDQYPAEVFEALGYKAYLYS 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GVAIL+K +P  +   +  +  D + RFI A F      L + ++Y P G   
Sbjct: 61  AQKKGYSGVAILTKQEPDHVEYGMGIEAYDNEGRFIRADFG----DLSVVSVYHPSG-TS 115

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +   K+ W++ F ++ ++  +    LI  GDYNI  +P D ++P+    ++ F  E 
Sbjct: 116 GDERQAFKMVWLEDFQKYVTELRKTRPNLILCGDYNICHEPIDIHDPVRNATNSGFLPEE 175

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R+   +  + GF D+ R  +     Y++W Y  +S +KNKG RID+ M S     +L SA
Sbjct: 176 REWMTRFLSAGFIDSFRLLYPEKQEYTWWSYRFNSRAKNKGWRIDYCMTSEPVRPMLKSA 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
            I          SDH P+ + ++
Sbjct: 236 SILNDA----VHSDHCPMALEIE 254


>gi|148556812|ref|YP_001264394.1| exodeoxyribonuclease III [Sphingomonas wittichii RW1]
 gi|148502002|gb|ABQ70256.1| Exodeoxyribonuclease III [Sphingomonas wittichii RW1]
          Length = 271

 Score =  198 bits (503), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 97/260 (37%), Positives = 143/260 (55%), Gaps = 5/260 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+N+N I+AR+  L  W+++  PD+ CLQE KT D+ FP   +++  Y     GQK
Sbjct: 14  MKIATFNINGIKARLPRLVEWLEQKAPDVACLQEIKTSDETFPIAEIEAAGYGAIWHGQK 73

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVAIL+K            DD D                + + ++YLP+GNP    K
Sbjct: 74  GFNGVAILAKGAQPVERRKGLPDDPDPSHS---RYIEAEVNGVVVASIYLPNGNPAPGPK 130

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP--HDCYNPIIWENDACFTLEVRQ 181
           +D K++W  R +  A+     E P++ AGDYN+IP P   D ++     +DA    E R 
Sbjct: 131 FDYKLAWFDRLIDHAADLWAGEMPVVLAGDYNVIPTPSTDDVFSERAMASDALTQPESRA 190

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           +F++L N G+TDA+R  H    +Y+FWDY A +W ++ G RIDH+MLSP A   L  A +
Sbjct: 191 AFRRLCNAGWTDAVRTIHPHGPVYTFWDYQAGAWQRDAGFRIDHLMLSPAAADRLTGAGV 250

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
           D   R   K SDH P  ++L
Sbjct: 251 DKDTRALEKASDHAPTWITL 270


>gi|163753486|ref|ZP_02160610.1| exodeoxyribonuclease III [Kordia algicida OT-1]
 gi|161327218|gb|EDP98543.1| exodeoxyribonuclease III [Kordia algicida OT-1]
          Length = 253

 Score =  198 bits (503), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 73/264 (27%), Positives = 124/264 (46%), Gaps = 15/264 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY---HIET 59
           + + ++NVN IRA I      W+++ NPD++C+QETK + +    E  +   Y   +  +
Sbjct: 1   MKIISYNVNGIRAAIRKGFLEWLQQANPDVLCIQETKAQKEQLDLEAFEQAGYKYNYWYS 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GVAIL K +P  +V     + +D + R +   +      + I ++YLP G   
Sbjct: 61  AQKKGYSGVAILCKEEPNNVVYGTGIETMDFEGRNLRVDYD----NISIMSMYLPSGTND 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
               +  +     +      ++       +  GDYNI  +  D +NP   +  + F  E 
Sbjct: 117 ARLNFKFQYMDEIKEYLANLRKEIPNL--VVCGDYNICHEEIDIHNPK-MKGVSGFLPEE 173

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R       + GF D+ R  +   H YS+W Y A++ + NKG RID+ M+       +  A
Sbjct: 174 RAWIGSFIDSGFIDSFRHLNKEPHHYSWWSYRANARANNKGWRIDYNMVGKALKDNITRA 233

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
            I  +     K SDH P++V +DI
Sbjct: 234 TILPEA----KHSDHCPILVEIDI 253


>gi|170703657|ref|ZP_02894392.1| exodeoxyribonuclease III Xth [Burkholderia ambifaria IOP40-10]
 gi|170131435|gb|EDT00028.1| exodeoxyribonuclease III Xth [Burkholderia ambifaria IOP40-10]
          Length = 271

 Score =  198 bits (503), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 84/256 (32%), Positives = 134/256 (52%), Gaps = 1/256 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+  R  ++  WI  +  D++CLQE K  D+ +P   L+++ Y     GQ+
Sbjct: 14  MKIATWNVNSLNVRKQHVLDWIAHSGTDVLCLQELKLPDEKYPRADLEAIGYRSWFTGQR 73

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAIL +   + +       ++       +    +  + +RI + Y P+G    S K
Sbjct: 74  TYNGVAILVRDT-LAVDESDVVRNIPGFDDPQQRVIAVTVEGVRIVSAYFPNGQSPDSDK 132

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W+     + S  ++    L   GDYNI P+  D ++P  WE     + + R  F
Sbjct: 133 FVYKMQWLDALHAWLSAEMQRYPKLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHF 192

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            KL  +GF DA R        +++WDY   ++ +N G+RIDHI+LSP   +   S  +D 
Sbjct: 193 AKLLELGFVDAFRCFEQPEKTFTWWDYRMLAFRRNAGLRIDHILLSPALAANCTSCEVDR 252

Query: 244 KPRGWTKPSDHTPVIV 259
            PR W +PSDHTPV+ 
Sbjct: 253 LPRTWEQPSDHTPVVA 268


>gi|188991692|ref|YP_001903702.1| Exodeoxyribonuclease III [Xanthomonas campestris pv. campestris
           str. B100]
 gi|167733452|emb|CAP51653.1| Exodeoxyribonuclease III [Xanthomonas campestris pv. campestris]
          Length = 367

 Score =  198 bits (502), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 96/262 (36%), Positives = 159/262 (60%), Gaps = 5/262 (1%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64
           T+AT+NVN I +R+ +L  W++   PDI+ LQE K+  + FP + ++   Y +   GQ+S
Sbjct: 18  TIATYNVNGIASRLPHLLQWLQREQPDIVGLQELKSTQEAFPEQAIRDAGYGVIWQGQRS 77

Query: 65  YNGVAILSKY-QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +NGVA+L++  +P+EI   LP D  D Q+R++EA        + +G LYLP+GNP    K
Sbjct: 78  WNGVALLARGAEPVEIRRGLPWDPADTQSRYLEAAI----HGVIVGCLYLPNGNPQPGPK 133

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +D K+ W +R LR A+  + L  P+   GD+N++P     Y+P  W  DA    E R ++
Sbjct: 134 FDYKLKWFQRLLRHAATLVALPHPVALIGDFNVVPTDAHIYDPKGWRKDALLQPESRAAY 193

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            +L   G+TD+++A H    +Y+FWDY+   +++++G+RIDH++L+    + L  A +D 
Sbjct: 194 AQLLAQGWTDSLQAIHGDAPVYTFWDYFRQHFARDRGLRIDHLLLNRTLAAGLRDAGVDK 253

Query: 244 KPRGWTKPSDHTPVIVSLDIPE 265
             R   K SDH P  +++D+P+
Sbjct: 254 WVRALEKASDHAPTWITVDVPD 275


>gi|111221323|ref|YP_712117.1| putative exodeoxyribonuclease III [Frankia alni ACN14a]
 gi|111148855|emb|CAJ60533.1| Putative exodeoxyribonuclease III [Frankia alni ACN14a]
          Length = 298

 Score =  198 bits (502), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 82/285 (28%), Positives = 127/285 (44%), Gaps = 13/285 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFP---FETLQSLNYHIETC 60
           + +ATWN+NS +AR   L  W+    PD++CLQETK  D  F     E L    Y +   
Sbjct: 1   MRIATWNINSAKARQARLIEWLDRAGPDVVCLQETKLSDDAFLELFDEDLFRRGYRVAHH 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           G   +NGVAILS+    ++V  LPG              T +   +R+ +LY+P+G  + 
Sbjct: 61  GDGRWNGVAILSRGSLDDVVRGLPGGPGFPDPEPRAIAATCDG--VRVWSLYVPNGRTVD 118

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
              Y  K+SW+       +  +     +   GD+NI P   D ++   +E     T   R
Sbjct: 119 DPHYAYKLSWLAALRDVVAAEVTRGPLM-TLGDFNIAPTDADVWDVAQFEGATHVTPAER 177

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            +  +L + G  D +R       +Y++WDY    + KN G+RID  + S +    + +  
Sbjct: 178 AALGELVDAGLVDVLRTRWPDDVVYTYWDYRQLCFPKNFGMRIDLTLASADVADRVRAVW 237

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI-------PEPRKKQQDSTSQNM 278
           +D   R  T  SDH PVIV LD+       P         ++   
Sbjct: 238 VDRAARKGTGTSDHAPVIVDLDVAPDGDVGPMVPPPSSRGSTGRA 282


>gi|261868358|ref|YP_003256280.1| exonuclease III [Aggregatibacter actinomycetemcomitans D11S-1]
 gi|3132266|dbj|BAA28143.1| deoxynuclease [Actinobacillus actinomycetemcomitans]
 gi|261413690|gb|ACX83061.1| exodeoxyribonuclease III [Aggregatibacter actinomycetemcomitans
           D11S-1]
          Length = 267

 Score =  198 bits (502), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 79/267 (29%), Positives = 122/267 (45%), Gaps = 8/267 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +RAR H L   I +  PD++ LQE K  D+ FP++ +  L YH+   GQK
Sbjct: 1   MKIMSFNINGLRARPHQLEEIINKYQPDVLGLQEIKVADEVFPYDLVDHLGYHVNHFGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122
            + GVA+LSK  P+ +    P DD + Q R I          L + N Y P G       
Sbjct: 61  GHYGVALLSKQAPLSVRKGFPTDDEEAQKRIIMIDLETKFGQLTVINGYFPQGESREHPT 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  +     R+  Q    + P+I  GD NI P         +     +      F 
Sbjct: 121 KFPAKQKFYADLQRYLEQDHNAQNPVIIMGDMNISPSDLDIGIGEENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+ +Q+L   G  D  R  + T +  +S++DY +  +  N+G+RIDHI+ +    + 
Sbjct: 181 PEEREWYQRLYAYGLEDTFRHMNPTVNDKFSWFDYRSKGFDDNRGLRIDHILANKALVAH 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262
                I    R   KPSDH P+     
Sbjct: 241 CVDTGIALDIRAMNKPSDHAPIWAEFK 267


>gi|171318534|ref|ZP_02907685.1| exodeoxyribonuclease III Xth [Burkholderia ambifaria MEX-5]
 gi|171096276|gb|EDT41183.1| exodeoxyribonuclease III Xth [Burkholderia ambifaria MEX-5]
          Length = 271

 Score =  198 bits (502), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 84/256 (32%), Positives = 134/256 (52%), Gaps = 1/256 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+  R  ++  WI  +  D++CLQE K  D+ +P   L+++ Y     GQ+
Sbjct: 14  MKIATWNVNSLNVRKQHVLDWIAHSGTDVLCLQELKLPDEKYPRADLEAIGYRSWFTGQR 73

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAIL +   + +       ++       +    +  + +RI + Y P+G    S K
Sbjct: 74  TYNGVAILVRDT-LAVDESDVVRNIPGFDDPQQRVVAVTVEGVRIVSAYFPNGQSPDSDK 132

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W+     + S  ++    L   GDYNI P+  D ++P  WE     + + R  F
Sbjct: 133 FVYKMQWLDALHAWLSAEMQRYPKLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHF 192

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            KL  +GF DA R        +++WDY   ++ +N G+RIDHI+LSP   +   S  +D 
Sbjct: 193 AKLLELGFVDAFRRFEQPEKTFTWWDYRMLAFRRNAGLRIDHILLSPALAANCTSCEVDR 252

Query: 244 KPRGWTKPSDHTPVIV 259
            PR W +PSDHTPV+ 
Sbjct: 253 LPRTWEQPSDHTPVVA 268


>gi|47097522|ref|ZP_00235061.1| exodeoxyribonuclease [Listeria monocytogenes str. 1/2a F6854]
 gi|224503787|ref|ZP_03672094.1| exodeoxyribonuclease III [Listeria monocytogenes FSL R2-561]
 gi|254832537|ref|ZP_05237192.1| 3'-exo-deoxyribonuclease exoA [Listeria monocytogenes 10403S]
 gi|254901191|ref|ZP_05261115.1| 3'-exo-deoxyribonuclease exoA [Listeria monocytogenes J0161]
 gi|254914076|ref|ZP_05264088.1| exodeoxyribonuclease [Listeria monocytogenes J2818]
 gi|254938390|ref|ZP_05270087.1| exodeoxyribonuclease [Listeria monocytogenes F6900]
 gi|47014105|gb|EAL05099.1| exodeoxyribonuclease [Listeria monocytogenes str. 1/2a F6854]
 gi|258611002|gb|EEW23610.1| exodeoxyribonuclease [Listeria monocytogenes F6900]
 gi|293592096|gb|EFG00431.1| exodeoxyribonuclease [Listeria monocytogenes J2818]
          Length = 251

 Score =  198 bits (502), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 65/262 (24%), Positives = 113/262 (43%), Gaps = 13/262 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      + +E + DI CLQETK ++     + L +   +     +
Sbjct: 1   MRLISWNVNGLRAAVKKGFLEYFEEVDADIFCLQETKLQEGQIELD-LPAYKDYWNYAVK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +P+ +   L   + D + R I   F                   +   
Sbjct: 60  KGYSGTAIFTKVEPLSVQYGLGIPEHDTEGRVITLEFEEFFMVTVYTPNSQAELKRLDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +  +    + L+  +P++  GD N+  +  D  NP     +A F+ E R  
Sbjct: 120 M------TFEDAILEYVKNLDKTKPVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F    + GF D+ R  +      YS+W Y  ++ ++N G RID+ ++S      L  A+I
Sbjct: 174 FSAFLDAGFIDSFRYFYPDLTDAYSWWSYRMNARARNTGWRIDYFVVSERLKDKLVDAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
                G    SDH PV + L++
Sbjct: 234 HADVLG----SDHCPVELELNL 251


>gi|154490204|ref|ZP_02030465.1| hypothetical protein PARMER_00436 [Parabacteroides merdae ATCC
           43184]
 gi|154089096|gb|EDN88140.1| hypothetical protein PARMER_00436 [Parabacteroides merdae ATCC
           43184]
          Length = 253

 Score =  198 bits (502), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 76/260 (29%), Positives = 132/260 (50%), Gaps = 12/260 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60
           + + T+NVN +RA +   L  W+ +  PD++CLQETK + + +P E  ++L Y   + + 
Sbjct: 1   MKIITYNVNGLRAAVGKGLPEWLAQEQPDVLCLQETKLQPEQYPAEAFEALGYKAWLFSA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GVAILS+ +P  +   +  +  D + RFI A F      L + ++Y P G    
Sbjct: 61  QKKGYSGVAILSRREPDHVEYGMGIEKYDNEGRFIRADFG----DLSVISVYHPSG-TSG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   K+ W++ F  +  +  +    LI  GDYNI  +P D ++P+    ++ F  E R
Sbjct: 116 DERQAFKMEWLEDFQNYVVELQKSRPKLILCGDYNICHEPIDIHDPVRNATNSGFLPEER 175

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           +   +  + G+ D  R  +     Y++W Y   + +KNKG RID+ M+S    + +  A 
Sbjct: 176 EWMTRFLDAGYIDTFRLLNPDKQEYTWWSYRFSARAKNKGWRIDYCMVSEPMKAQVEKAY 235

Query: 241 IDTKPRGWTKPSDHTPVIVS 260
           I  +       SDH P ++ 
Sbjct: 236 ILNEA----VHSDHCPAVIE 251


>gi|325917489|ref|ZP_08179695.1| Exodeoxyribonuclease III [Xanthomonas vesicatoria ATCC 35937]
 gi|325536283|gb|EGD08073.1| Exodeoxyribonuclease III [Xanthomonas vesicatoria ATCC 35937]
          Length = 259

 Score =  198 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 91/259 (35%), Positives = 141/259 (54%), Gaps = 6/259 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A+WNVNS+  R+ +L  W+ +  PD++ +QETK ED  FP   L +L Y    CGQK
Sbjct: 1   MKIASWNVNSLNVRLPHLQQWLTDFAPDVVGIQETKLEDHKFPDAALAALGYRSVFCGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAILS+   +++   +PG D   Q              +RI NLY+ +G  + + K
Sbjct: 61  TYNGVAILSRAPALDVQMGIPGFDDVQQRVIAATVDG-----VRIINLYVVNGQDVGTDK 115

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN-DACFTLEVRQS 182
           Y  K+ W++    + +Q L+    L+  GD+NI P   D ++P++W       +   R +
Sbjct: 116 YAYKLRWLEAVHDWIAQELQRHPQLVVLGDFNIAPDARDVHDPVVWNEAHILTSAAERAA 175

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
            +KL  +G  DA R  HD    +S+WDY   ++ +N G+RID  ++S    +    A ID
Sbjct: 176 LEKLLALGLHDAFRLHHDDAEQFSWWDYRQAAYRRNLGLRIDLTLVSDALRARAVGAGID 235

Query: 243 TKPRGWTKPSDHTPVIVSL 261
            +PR W +PSDH P  V L
Sbjct: 236 REPRTWERPSDHAPAWVQL 254


>gi|313204342|ref|YP_004042999.1| exodeoxyribonuclease iii xth [Paludibacter propionicigenes WB4]
 gi|312443658|gb|ADQ80014.1| exodeoxyribonuclease III Xth [Paludibacter propionicigenes WB4]
          Length = 253

 Score =  198 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 78/262 (29%), Positives = 122/262 (46%), Gaps = 12/262 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60
           + + ++NVN IRA +  N   W++  NPD++CLQETK +           + Y  ++ + 
Sbjct: 1   MKIISYNVNGIRAALSKNFQEWLQAENPDVLCLQETKAQPDQVDTMLFAEMGYTSYLHSA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GVAILSK  P  +V  +     D + R I A F      L I  +Y+P G+   
Sbjct: 61  EKKGYSGVAILSKQAPDRVVVGMNNPVFDAEGRVIRADFG----DLSIVCVYIPSGS-SG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   K+ ++  F  F  +  +    L+  GDYNI  +P D  +P      + F  E R
Sbjct: 116 DERQAFKMQFLAAFGPFILELRKTRPNLVVCGDYNICHKPIDINHPERQNGVSGFLPEER 175

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
               + +  G  D+ R    +   YS+W Y   +  +N G RID+  ++    + L SA 
Sbjct: 176 AWLDQFELDGMVDSFRVFDKSAEKYSWWSYRGGARFRNVGWRIDYHWVTESLHTRLKSAA 235

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I T        SDH PV V L+
Sbjct: 236 ILTDA----VHSDHCPVAVELN 253


>gi|311694667|gb|ADP97540.1| exonuclease III [marine bacterium HP15]
          Length = 270

 Score =  198 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 87/271 (32%), Positives = 134/271 (49%), Gaps = 11/271 (4%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           ++   ++NVNSIR R+H L A I    PD I LQETK +D +FP E ++ L YH+   GQ
Sbjct: 1   MM-FVSFNVNSIRTRLHQLEAVIDTLAPDFIGLQETKVQDDDFPVEAIRDLGYHVHFHGQ 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K++ GVA+LSK +P E++   P D  D Q R I   FT+N + L + N Y P G      
Sbjct: 60  KTHYGVALLSKAEPEEVIKGYPWDGEDSQRRLITGHFTVNGEKLTVINGYFPQGESRDHP 119

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175
            K+  K  +    +R+  +  +    ++  GD NI P         D     +      F
Sbjct: 120 VKFPAKEKFYGDLMRYLDELKKAGGHVVVMGDMNISPTDKDIGIGADNAKRWLRTGKCSF 179

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKN--KGIRIDHIMLSPEA 232
             E R+   ++++ G+TD  R  H      +S++DY +  + ++  +G+RID IM S   
Sbjct: 180 LPEEREWLGQVESRGYTDVFRHLHPDEADTFSWFDYRSKGFERDPKRGLRIDLIMASDSL 239

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                 A +    R   +PSDH PV  S ++
Sbjct: 240 LPKARKAGVSYDIRAMERPSDHCPVWASFEL 270


>gi|89069305|ref|ZP_01156668.1| probable exonuclease [Oceanicola granulosus HTCC2516]
 gi|89045181|gb|EAR51249.1| probable exonuclease [Oceanicola granulosus HTCC2516]
          Length = 255

 Score =  198 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 93/258 (36%), Positives = 138/258 (53%), Gaps = 3/258 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + VAT+N+N++R R+ NL  W+    PD++CLQE KT D + P   L    Y     GQ+
Sbjct: 1   MKVATYNINNVRKRLGNLLDWLAGAAPDVLCLQELKTADADLPRAALAEAGYQGVWRGQR 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           ++NGVAILS+     +V        D              + + IG LY P+GNP    K
Sbjct: 61  AWNGVAILSRGGAPVLVRDSL---PDDPDPRQARYLEAAVEGVLIGCLYAPNGNPCPGPK 117

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           YD K +W  R +  A+  L    P + AGDYNI+P+P D Y+   ++  +    E+R  +
Sbjct: 118 YDYKRAWTDRLVAHAADLLAAGVPAVLAGDYNIVPEPRDIYDTTSYDGSSLVQPEMRARY 177

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + L + G+TDA+RA       Y+FWDY    + ++ G+R+DH++LSP A   L +  ID 
Sbjct: 178 RSLLDAGWTDAVRALRPEGTAYTFWDYRRRRFERDGGLRLDHLLLSPPAAERLVAIGIDR 237

Query: 244 KPRGWTKPSDHTPVIVSL 261
           + R   + SDH PV V L
Sbjct: 238 EARAREEASDHAPVWVEL 255


>gi|294664292|ref|ZP_06729661.1| exodeoxyribonuclease III [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292605941|gb|EFF49223.1| exodeoxyribonuclease III [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 330

 Score =  198 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 87/275 (31%), Positives = 146/275 (53%), Gaps = 3/275 (1%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64
            +AT+NVN I +R+ +L  W++   PDI+ LQE K+    FP + ++   Y +   G+KS
Sbjct: 7   KIATFNVNGIASRLPHLLEWLQREQPDIVGLQELKSTQSAFPKQAIRDAGYGVIWHGEKS 66

Query: 65  YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124
           +NGVA+L++      +      D                  + +  LYLP+GNP    K+
Sbjct: 67  WNGVALLARGTEPVEIRRGLPWDPRDTQS---RYLEAAIHGVVVACLYLPNGNPQPGPKF 123

Query: 125 DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ 184
           D K++W +R +R A   ++L  P+   GD+N++P   D Y+P  W  DA    E R+++Q
Sbjct: 124 DYKLAWFERLIRHAKTLVDLPHPVALIGDFNVVPTDADIYDPKGWRKDALLQPESREAYQ 183

Query: 185 KLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK 244
            L   G+TD++ A H    +Y+FWDY+   +++++G+RIDH++L+      L  A +D  
Sbjct: 184 TLLAQGWTDSLPAIHGQTPIYTFWDYFRQHFARDRGLRIDHLLLNRTLGPGLQDAGVDKW 243

Query: 245 PRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMK 279
            R   K SDH P  +S+ +P+   +    T+   K
Sbjct: 244 VRALEKASDHAPTWISVRVPDAPAEAAPDTTPVAK 278


>gi|325578563|ref|ZP_08148663.1| exodeoxyribonuclease III [Haemophilus parainfluenzae ATCC 33392]
 gi|325159799|gb|EGC71929.1| exodeoxyribonuclease III [Haemophilus parainfluenzae ATCC 33392]
          Length = 267

 Score =  198 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 80/267 (29%), Positives = 126/267 (47%), Gaps = 8/267 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A I++  PD+I LQE K  D++FP+    +  YH+   GQK
Sbjct: 1   MKFISFNINGLRARPHQLEAIIEKYQPDVIGLQEIKVADEDFPYTITDNWGYHVFHHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122
            + GVA+L+K +P  +    P D+ D Q R I A        L + N Y P G      T
Sbjct: 61  GHYGVALLTKKEPKAVRRGFPTDNEDAQKRIIMADLETPFGLLTVINGYFPQGESRAHET 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  +     R+  Q  +   P++  GD NI P         +     +      F 
Sbjct: 121 KFPAKEKFYADLQRYLEQDHDKANPVLIMGDMNISPTDLDIGIGDENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+ +Q+L + G  D  R  + T +  +S++DY +  +  N+G+RIDHI+++ +    
Sbjct: 181 PEEREWYQRLYDYGLEDTFRKLNPTVNDKFSWFDYRSKGFDDNRGLRIDHILVNHQLAER 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262
                I    R   KPSDH P+     
Sbjct: 241 CVDVGIALDIRAMEKPSDHAPIWAEFK 267


>gi|225010201|ref|ZP_03700673.1| exodeoxyribonuclease III Xth [Flavobacteria bacterium MS024-3C]
 gi|225005680|gb|EEG43630.1| exodeoxyribonuclease III Xth [Flavobacteria bacterium MS024-3C]
          Length = 254

 Score =  198 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 78/264 (29%), Positives = 131/264 (49%), Gaps = 14/264 (5%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY---HIET 59
           + + ++NVN IRA +      W++  NPD++CLQETK           ++  Y   +  +
Sbjct: 1   MKIISYNVNGIRAALKKGFLDWLQGANPDVLCLQETKAHKDQLDLSLFEAAGYPYHYWFS 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GVA+L K +P ++V     D +D + R +   +      + I ++YLP G   
Sbjct: 61  AQKKGYSGVAVLCKTKPEDVVYGTGIDYMDFEGRNLLVRYPG----ISIMSMYLPSGTNQ 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                D K +++  FL +     E +  L+  GDYNI  Q  D ++P+  +N + F  E 
Sbjct: 117 DR--LDFKFNYMDDFLDYTKSLKETDPNLVICGDYNICHQAIDIHDPVRNKNISGFLPEE 174

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R     L   GFTD+ R  +     YS+W Y A+S + NKG R+D+ ++S    + + +A
Sbjct: 175 RAWLSALLESGFTDSFRQINTAPDQYSWWSYRANSRANNKGWRLDYALVSKPLDTQILNA 234

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
           +I +        SDH PV V + +
Sbjct: 235 QILSAA----VHSDHCPVTVEISL 254


>gi|150024176|ref|YP_001295002.1| exodeoxyribonuclease III [Flavobacterium psychrophilum JIP02/86]
 gi|149770717|emb|CAL42181.1| Exodeoxyribonuclease III [Flavobacterium psychrophilum JIP02/86]
          Length = 253

 Score =  198 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 85/263 (32%), Positives = 121/263 (46%), Gaps = 14/263 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY---HIET 59
           + + ++NVN IRA I      W++  NPD+ICLQE K      P + + +  Y   +  +
Sbjct: 1   MKIISYNVNGIRAAITKGFIDWLQAANPDVICLQEIKATQDQIPTDAITAAGYPYQYYFS 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GVAIL K +P  IV     D +D + R I   F      L I +LYLP G  I
Sbjct: 61  AQKKGYSGVAILCKTEPKNIVFGTEIDHMDFEGRNIRVDFD----DLSIMSLYLPSGTNI 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                D K  ++  F  + +        LI  GDYNI  +  D +NP      + F  E 
Sbjct: 117 ER--LDHKFMFMDDFQNYINNLKTKIPNLIICGDYNICHEAIDIHNPTQNAKTSGFLPEE 174

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R         GF D+ R  +   H YS+W Y A +   NKG RID+ ++S      +  A
Sbjct: 175 RAWLDAFIKSGFVDSFRHFNKEPHHYSWWSYRAGARGNNKGWRIDYNLVSETLKERIKRA 234

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
            I        K SDH PV+V ++
Sbjct: 235 IILPDA----KHSDHCPVLVEVE 253


>gi|319760561|ref|YP_004124499.1| exodeoxyribonuclease III [Candidatus Blochmannia vafer str. BVAF]
 gi|318039275|gb|ADV33825.1| exodeoxyribonuclease III [Candidatus Blochmannia vafer str. BVAF]
          Length = 274

 Score =  198 bits (502), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 81/267 (30%), Positives = 125/267 (46%), Gaps = 7/267 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L   I +  PD++ LQETK  +  FP + ++   YH+   GQK
Sbjct: 1   MRFVSFNINGLRARTHQLDQLINKLQPDVLGLQETKVHNDLFPIKKIKKYGYHVYYDGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            Y+GVA+  K  P+ +    P +    Q R I A  T +  +L + N Y P G    S K
Sbjct: 61  QYHGVALFLKKLPLIVTRGFPLNPCPYQKRIITAQITTSIGSLTVINGYFPQGENNQSEK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACFTL 177
           +  K  + +    +       E  L+  GD NI P   D        +  I      F  
Sbjct: 121 FIYKKQFYQNLKNYIQNNYSNESLLLIMGDMNISPTDLDVGIGKKNTDRWIKMGKCAFLP 180

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
           E RQ    L N G  D  R+ +    + YS++ Y ++ +  N+G+RID ++++     L 
Sbjct: 181 EERQWITDLMNWGLIDIYRSKYPYQNNRYSWFSYQSNGFKNNRGLRIDLVLVTQPLAHLC 240

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263
             + I+   R  T PSDH P+ V LDI
Sbjct: 241 TCSGINYDIRNMTHPSDHAPIWVDLDI 267


>gi|295110263|emb|CBL24216.1| exodeoxyribonuclease III [Ruminococcus obeum A2-162]
          Length = 253

 Score =  197 bits (501), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 74/261 (28%), Positives = 113/261 (43%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN IRA I        KE N D+ CLQETK +      E L   + +     +
Sbjct: 1   MKLISWNVNGIRACITKGFEDRFKELNADVFCLQETKCQQGQVELE-LPGYHQYWNYANR 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           + Y+G A+ +K +P+ +V  +  +  D + R I   F                   +   
Sbjct: 60  RGYSGTAVFTKKEPLSVVNGIGIEAHDKEGRVITLEFEEFYFVTVYTPNSQSELRRLEYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +R       +L+ ++P+I  GD N+  Q  D  NP     +A FT E R  
Sbjct: 120 M------EWERDFLAYLLKLQEKKPVICCGDMNVAHQEIDLKNPKTNRKNAGFTDEERAC 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F ++   GF D  R  +     +YS+W Y   +  KN G RID+ ++SP     L  A I
Sbjct: 174 FSRMLESGFVDTFRYFYPDKEGIYSWWSYRFKAREKNAGWRIDYFIVSPSLKDRLQDASI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            T+  G    SDH PV + +D
Sbjct: 234 HTEIMG----SDHCPVELDID 250


>gi|172061100|ref|YP_001808752.1| exodeoxyribonuclease III Xth [Burkholderia ambifaria MC40-6]
 gi|171993617|gb|ACB64536.1| exodeoxyribonuclease III Xth [Burkholderia ambifaria MC40-6]
          Length = 271

 Score =  197 bits (501), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 84/256 (32%), Positives = 135/256 (52%), Gaps = 1/256 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+  R  ++  WI  +  D++CLQE K  D+ +P   L+++ Y     GQ+
Sbjct: 14  MKIATWNVNSLNVRKQHVLDWIAHSGTDVLCLQELKLPDEKYPRADLEAIGYRSWFTGQR 73

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAIL++   + +       ++       +    +  + +RI + Y P+G    S K
Sbjct: 74  TYNGVAILARDT-LAVDESDIVRNIPGFDDPQQRVIAVTVEGVRIVSAYFPNGQSPDSDK 132

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W+     + S  ++    L   GDYNI P+  D ++P  WE     + + R  F
Sbjct: 133 FVYKMQWLDALHAWLSAEMQRYPKLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHF 192

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            KL  +GF DA R        +++WDY   ++ +N G+RIDHI+LSP   +   S  +D 
Sbjct: 193 AKLLELGFVDAFRRFEQPEKTFTWWDYRMLAFRRNAGLRIDHILLSPALAANCTSCEVDR 252

Query: 244 KPRGWTKPSDHTPVIV 259
            PR W +PSDHTPV+ 
Sbjct: 253 LPRTWEQPSDHTPVVA 268


>gi|16800960|ref|NP_471228.1| hypothetical protein lin1894 [Listeria innocua Clip11262]
 gi|16414395|emb|CAC97124.1| lin1894 [Listeria innocua Clip11262]
 gi|313623313|gb|EFR93545.1| exodeoxyribonuclease III [Listeria innocua FSL J1-023]
          Length = 251

 Score =  197 bits (501), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 65/262 (24%), Positives = 113/262 (43%), Gaps = 13/262 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      + +E + DI CLQETK ++     + L +   +     +
Sbjct: 1   MKLISWNVNGLRAAVKKGFLEYFEEVDADIFCLQETKLQEGQIELD-LPAYKDYWNYAVK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +P+ +   L   + D + R I   F                   +   
Sbjct: 60  KGYSGTAIFTKVEPLSVQYGLGVPEHDTEGRVITLEFEDFYMVTVYTPNSQAELKRLDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +  +    + L+  +P++  GD N+  +  D  NP     +A F+ E R  
Sbjct: 120 M------TFEDAILEYVKNLDKTKPVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F    + GF D+ R  +      YS+W Y  ++ ++N G RID+ ++S      L  A+I
Sbjct: 174 FSAFLDAGFIDSFRYFYPDLTDAYSWWSYRMNARARNTGWRIDYFVVSERLKDKLVDAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
                G    SDH PV + L++
Sbjct: 234 HADVLG----SDHCPVELELNL 251


>gi|326790354|ref|YP_004308175.1| exodeoxyribonuclease III [Clostridium lentocellum DSM 5427]
 gi|326541118|gb|ADZ82977.1| exodeoxyribonuclease III [Clostridium lentocellum DSM 5427]
          Length = 251

 Score =  197 bits (501), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 73/262 (27%), Positives = 111/262 (42%), Gaps = 13/262 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +      + K  + D+ C+QETK ++     E L     +     +
Sbjct: 1   MKCVSWNVNGVRAVLTKGFLDYFKAVDADVFCIQETKCQEGQVEIE-LPGYYQYWNYAQK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G A+ SK +P+ +   L   + D + R I A F                   I   
Sbjct: 60  KGYSGTALFSKKEPLSVSYGLGIAEHDTEGRVITAEFEEAYVVTVYTPNAQNELARIDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +   +   ++LE  +P+I  GD N+  Q  D  NP     +A F+ E R  
Sbjct: 120 M------AWEDAFKAYLKKLEENKPVIICGDLNVAHQEIDLKNPKTNRGNAGFSDEERGK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L   GF D  R  +      YS+W Y   +  KN G RID+ + S      L  A I
Sbjct: 174 FGELLEAGFIDTFRYFYPDLEGAYSWWSYRFKAREKNTGWRIDYFLASEVLKDKLVGAAI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
           D +  G    SDH PVI+ ++I
Sbjct: 234 DAEILG----SDHCPVILEINI 251


>gi|161510986|ref|YP_088240.2| exonuclease III [Mannheimia succiniciproducens MBEL55E]
          Length = 267

 Score =  197 bits (501), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 82/267 (30%), Positives = 122/267 (45%), Gaps = 8/267 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +RAR H L   +++  PDII LQE K  D+ FP E +  L YH+   GQK
Sbjct: 1   MKIISFNINGLRARPHQLDKIVEQYQPDIIGLQEIKVADEMFPHELVDHLGYHVYHHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122
            + GVA+L K  P  +      D  D Q R I A F      L + N Y P G      T
Sbjct: 61  GHYGVALLCKQAPKAVHKGFSTDTEDAQKRLIMADFETAFGALTVVNGYFPQGESRDHET 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  +    L +       E  +I  GD NI P         D     +      F 
Sbjct: 121 KFPAKEKFYADLLNYVKNEHNPESNIIIMGDMNISPTDLDIGIGEDSRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+ +Q+L   G  D  R  +  T+  +S++DY +  +++N+G+RIDHI+ + +    
Sbjct: 181 PEEREWYQRLYECGLEDTFRKLNPWTNDKFSWFDYRSKGFAENRGLRIDHILANSKLAER 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262
                I    R   KPSDH P+  +  
Sbjct: 241 CVDTGIALDIRAMEKPSDHAPIWATFK 267


>gi|298375698|ref|ZP_06985655.1| exodeoxyribonuclease III [Bacteroides sp. 3_1_19]
 gi|298268198|gb|EFI09854.1| exodeoxyribonuclease III [Bacteroides sp. 3_1_19]
          Length = 284

 Score =  197 bits (501), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 81/265 (30%), Positives = 137/265 (51%), Gaps = 12/265 (4%)

Query: 1   MSVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HI 57
           +  + + T+N N +RA +   L  W+ +  PD++C+QETK +   FP ET ++L Y  ++
Sbjct: 29  LEKLKIITYNTNGLRAAVGKGLPEWLAQEQPDVLCIQETKLQPDQFPSETFETLGYKSYL 88

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
            +  +K Y+GVAIL+K +P  I   +  +  D + RF+ A F      + I ++Y P G 
Sbjct: 89  FSAQKKGYSGVAILTKQEPDHIEYGMGIEKYDNEGRFLRADFG----DVSIVSVYHPSG- 143

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
                + D K+ W++ F ++  +  +    LI  GDYNI  +P D ++PI    ++ F  
Sbjct: 144 TSGDERQDFKMIWLEDFQKYVVELQKSRPNLILCGDYNICHEPIDIHDPIRNAKNSGFLP 203

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
           E R+   +  + GFTD  R  +     Y++W Y  +S  KNKG RID+ M+S      + 
Sbjct: 204 EEREWMTRFLSAGFTDTFRFLNPDKQEYTWWSYRFNSRFKNKGWRIDYCMVSDNMKPKVK 263

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLD 262
           +A I          SDH P ++ ++
Sbjct: 264 AAYILNDA----VHSDHCPAVLEIE 284


>gi|319407432|emb|CBI81083.1| exodeoxyribonuclease III [Bartonella sp. 1-1C]
          Length = 260

 Score =  197 bits (501), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 136/259 (52%), Positives = 179/259 (69%), Gaps = 1/259 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+  I+AR   L  W+++N PDI CLQE K+ D+NFP +T+++L YHIET GQK
Sbjct: 1   MKIATWNIAGIKARHETLCKWLEQNQPDIACLQEIKSVDENFPRDTIENLGYHIETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           S+NGVAILSK  P E++  LPGD+ D QAR+IE  ++ N  ++R+ +LYLP+GNPI S K
Sbjct: 61  SFNGVAILSKKVPDEVILRLPGDNNDKQARYIETVYSTNIGSIRVASLYLPNGNPINSEK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  KI W+KR    A   L  EEPLI AGDYN+IP P D  NP  W NDA F  ++RQ F
Sbjct: 121 YLYKIEWMKRLYTHAKSLLAYEEPLILAGDYNVIPTPLDAKNPQEWSNDALFLPQIRQIF 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q + ++GF DAIR   D    +SFWD+ A++W KN GIRIDH++LSPEA   L  A   T
Sbjct: 181 QCITHLGFYDAIRNVTDAP-SFSFWDFQANAWKKNNGIRIDHLLLSPEAADQLICAYSQT 239

Query: 244 KPRGWTKPSDHTPVIVSLD 262
           + RG+ KPSDH P+ + L+
Sbjct: 240 EVRGYQKPSDHVPIWIELN 258


>gi|209695422|ref|YP_002263351.1| exonuclease III [Aliivibrio salmonicida LFI1238]
 gi|208009374|emb|CAQ79647.1| exodeoxyribonuclease III [Aliivibrio salmonicida LFI1238]
          Length = 268

 Score =  197 bits (501), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 79/268 (29%), Positives = 128/268 (47%), Gaps = 9/268 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V ++N+N +RAR+H L A I ++NPD+I LQE K  +  FP E ++++ Y++   GQK
Sbjct: 1   MKVISFNINGLRARLHQLQAIIDKHNPDVIGLQEIKVHNDMFPVEAVEAMGYNVYFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121
           ++ GVA+L K +PI +        +   +   +      +   + + N Y P G+ I   
Sbjct: 61  AHYGVAMLCKKEPISVQYGFDTDTEEHQKRMIMTTHERDDGSKVTVMNGYFPQGDSIKHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175
           TK+  K  + K  +   +     +E LI  GD NI P               +      F
Sbjct: 121 TKFPYKRQFYKDLMIHLNTHHTNDEELIIMGDINISPIDADIGIGEPNAKRWLRTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R+  Q L++ GF D  R  H      +S++DY +  +  N+G+RID +M +P    
Sbjct: 181 QPEEREWLQALKDWGFEDTFRNLHPEVTDQFSWFDYRSKGFVDNRGLRIDVVMATPSLAG 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
               A ID + R   KPSDH P+  +  
Sbjct: 241 KCTEAGIDYELRAIEKPSDHAPIWSTFK 268


>gi|315126445|ref|YP_004068448.1| exonuclease III [Pseudoalteromonas sp. SM9913]
 gi|315014959|gb|ADT68297.1| exonuclease III [Pseudoalteromonas sp. SM9913]
          Length = 268

 Score =  197 bits (501), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 77/268 (28%), Positives = 126/268 (47%), Gaps = 9/268 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V ++N+N +RAR+H L A I ++ PDII LQE K  D+ FP + +Q + YH+   GQK
Sbjct: 1   MKVISFNINGLRARLHQLQAIIDKHQPDIIGLQEIKVHDEAFPLDDVQKMGYHVYFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHL-PGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121
           ++ GVA+L K +P  ++       D   +          N + L + N Y P G+ I   
Sbjct: 61  AHYGVAMLCKKEPKSVLKGFSTDTDESQKRMISVTVEQENGRDLHVMNGYFPQGDNINHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175
           TK+  K  + +  +   +     ++ +I  GD NI P   D           +      F
Sbjct: 121 TKFPYKRQFYQDLMTHLNSHYTPDQDVIVMGDINISPTDLDIGIGEVNAKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
               R+    L N GF D  R  +   +  YS++DY +  +  N+G+RID ++ + +  +
Sbjct: 181 QPVEREWLATLLNWGFKDTFREQNPETNDQYSWFDYRSKGFVDNRGLRIDVVLATHDLAA 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
                 ID + R   KPSDH P+    +
Sbjct: 241 RCIDTGIDYELRAIDKPSDHAPIWSEFN 268


>gi|115352233|ref|YP_774072.1| exodeoxyribonuclease III Xth [Burkholderia ambifaria AMMD]
 gi|115282221|gb|ABI87738.1| Exodeoxyribonuclease III [Burkholderia ambifaria AMMD]
          Length = 271

 Score =  197 bits (501), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 84/256 (32%), Positives = 135/256 (52%), Gaps = 1/256 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+  R  ++  WI  +  D++CLQE K  D+ +P   L+++ Y     GQ+
Sbjct: 14  MKIATWNVNSLNVRKQHVLDWIAHSGTDVLCLQELKLPDEKYPRADLEAIGYRSWFTGQR 73

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAIL++   + +       ++       +    +  + +RI + Y P+G    S K
Sbjct: 74  TYNGVAILARDT-LAVDESDIVRNIPGFDDPQQRVIAVTVEGVRIVSAYFPNGQSPESDK 132

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W+     + S  ++    L   GDYNI P+  D ++P  WE     + + R  F
Sbjct: 133 FVYKMQWLDALHAWLSAEMQRYPKLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHF 192

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            KL  +GF DA R        +++WDY   ++ +N G+RIDHI+LSP   +   S  +D 
Sbjct: 193 AKLLELGFVDAFRRFEQPEKTFTWWDYRMLAFRRNAGLRIDHILLSPALAANCTSCEVDR 252

Query: 244 KPRGWTKPSDHTPVIV 259
            PR W +PSDHTPV+ 
Sbjct: 253 LPRTWEQPSDHTPVVA 268


>gi|253568552|ref|ZP_04845963.1| exodeoxyribonuclease [Bacteroides sp. 1_1_6]
 gi|251842625|gb|EES70705.1| exodeoxyribonuclease [Bacteroides sp. 1_1_6]
          Length = 254

 Score =  197 bits (501), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 82/263 (31%), Positives = 138/263 (52%), Gaps = 12/263 (4%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59
           ++ + T+NVN +RA     L  W+ + NPDI+CLQETK +   +P E  ++L Y  ++ +
Sbjct: 1   MMKIITYNVNGLRAAASKGLPEWLVQENPDILCLQETKLQPDQYPAEVFEALGYKAYLYS 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GVAIL+K +P  +   +  +  D + RFI A F      L + ++Y P G   
Sbjct: 61  AQKKGYSGVAILTKQEPDHVEYGMGIEAYDNEGRFIRADFG----DLSVVSVYHPSG-TS 115

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +   K+ W++ F ++ ++  +    LI  GDYNI  +P D ++P+    ++ F  E 
Sbjct: 116 GDERQAFKMVWLEDFQKYVTELRKTRPNLILCGDYNICHEPIDIHDPVRNATNSGFLPEE 175

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R+   +  + GF D+ R  +     Y++W Y  +S +KNKG RID+ M S     +L SA
Sbjct: 176 REWMTRFLSAGFIDSFRLLYPEKQEYTWWSYRFNSRAKNKGWRIDYCMTSEPVRPMLKSA 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
            I          SDH P+ + ++
Sbjct: 236 SILNDA----VHSDHCPMALEIE 254


>gi|117928676|ref|YP_873227.1| exodeoxyribonuclease III [Acidothermus cellulolyticus 11B]
 gi|117649139|gb|ABK53241.1| Exodeoxyribonuclease III [Acidothermus cellulolyticus 11B]
          Length = 282

 Score =  197 bits (501), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 81/282 (28%), Positives = 127/282 (45%), Gaps = 22/282 (7%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+ AR+  L  W+    PD++CLQETK     FP E +    Y +   G  
Sbjct: 1   MRIATWNVNSVVARLPRLHEWLDTVRPDVVCLQETKCAGDAFPSEGIIERGYQVAAHGDG 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT------------------ 105
            +NGVAILS+    E+    PG           +  + +                     
Sbjct: 61  RWNGVAILSRIGLEEVTRGFPGQPGYAAPPAAPSPDSDDALLPAAAAEPVVEARAIGATC 120

Query: 106 --LRIGNLYLPHGNPITSTKYDDK--ISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161
             +RI +LY+P+G  + S  Y  K       R    A        P I AGD+NI P   
Sbjct: 121 GGVRIWSLYVPNGRALDSPHYAYKLEWLAALRTALAAELARHSGRPFIVAGDFNIAPTDR 180

Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI 221
           D ++P ++      T   RQ+ Q + ++G  D         + +++WDY A  + KN+G+
Sbjct: 181 DVWDPAVFVGSTHVTDAERQALQAICDLGLRDIFPRALKYDYPFTYWDYRAGMFPKNQGM 240

Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           RID ++ +  A + +  A +D + R    PSDH P++V   +
Sbjct: 241 RIDLVLANDAAAAKVTDAYVDREARKGKGPSDHAPIVVDFAL 282


>gi|289666147|ref|ZP_06487728.1| exodeoxyribonuclease III [Xanthomonas campestris pv. vasculorum
           NCPPB702]
 gi|289670759|ref|ZP_06491834.1| exodeoxyribonuclease III [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 259

 Score =  197 bits (501), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 88/259 (33%), Positives = 137/259 (52%), Gaps = 6/259 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A+WNVNS+  R+ +L  W+    PD++ +QETK ED  FP   L  L Y    CGQK
Sbjct: 1   MKIASWNVNSLNVRLPHLQQWLTAFAPDVVGIQETKLEDHKFPDAALAELGYRSVFCGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAILS+   +++ T +PG D   Q              +RI NLY+ +G  + + K
Sbjct: 61  TYNGVAILSRSPALDVQTGIPGFDDVQQRVIAATVDG-----VRIINLYVVNGQDVGTDK 115

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN-PIIWENDACFTLEVRQS 182
           Y  K+ W+     + +Q+L+    L+  GD+NI P   D ++  +  E+    + + R +
Sbjct: 116 YAYKLRWLAAAHDWIAQQLQTYPQLVVLGDFNIAPDARDVHDATVWNEHHILTSTDERAA 175

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
            +KL  +G  DA R        +S+WDY    + +N G+RID  ++S    +    + ID
Sbjct: 176 LEKLLALGLHDAFRLHPQAAEQFSWWDYRQAGFRRNLGLRIDLTLVSDALRTRAVESGID 235

Query: 243 TKPRGWTKPSDHTPVIVSL 261
            +PR W +PSDH P  V L
Sbjct: 236 REPRTWERPSDHAPAWVRL 254


>gi|294141585|ref|YP_003557563.1| exodeoxyribonuclease III [Shewanella violacea DSS12]
 gi|293328054|dbj|BAJ02785.1| exodeoxyribonuclease III [Shewanella violacea DSS12]
          Length = 268

 Score =  197 bits (501), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 80/264 (30%), Positives = 128/264 (48%), Gaps = 9/264 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N IRAR+H L A I  + PDII LQETK  D+ FP   ++++ Y +   G K
Sbjct: 1   MKIVSFNINGIRARLHQLQALIDAHQPDIIGLQETKAHDEVFPAADVEAMGYKVHYHGGK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLD-VQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121
           ++ GVA+LSK +PI++    P D  D  +   +      N + L + N Y P G+ I+  
Sbjct: 61  AHYGVAMLSKLEPIKVQKGFPTDSEDAQRRMIMATFTQENGRPLTVLNGYFPQGDNISHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175
           TKY  K  + K  + + ++    +E +   GD NI P               +      F
Sbjct: 121 TKYPAKRQFYKDLMTYLNENHTPDEDIAIIGDINISPMDLDIGIGEPNAKRWLRTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R+  + L + G  D  R  H      YS++DY +  +  N+G+RID ++ +     
Sbjct: 181 QPEEREWLKTLMDWGLVDTFRELHPERTERYSWFDYRSKGFVDNRGLRIDVVLATKSLNE 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVI 258
            L  + +D   R   KPSDH P+ 
Sbjct: 241 RLVESDVDYDLRAIEKPSDHAPIW 264


>gi|190576404|ref|YP_001974249.1| putative endonuclease/exonuclease/phosphatase family protein
           [Stenotrophomonas maltophilia K279a]
 gi|190014326|emb|CAQ47973.1| putative endonuclease/exonuclease/phosphatase family protein
           [Stenotrophomonas maltophilia K279a]
          Length = 255

 Score =  197 bits (501), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 86/259 (33%), Positives = 140/259 (54%), Gaps = 6/259 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A+WNVNS+  R+ +L  W+++  PDI+ +QETK ED  FP   L +  Y      QK
Sbjct: 1   MKIASWNVNSLNVRLPHLEQWLRDFGPDIVGIQETKLEDHKFPDSALIAAGYRSVFASQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVA+LS+    ++   +PG + + +              LR+ NLY+ +G  + + K
Sbjct: 61  TYNGVALLSREPAQDVQIGIPGFEDEQKRVI-----AGTFGDLRVINLYVVNGQDVGTDK 115

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI-IWENDACFTLEVRQS 182
           Y+ K+ W++    + +Q L+    LI  GD+NI P   D ++P    EN    +   R +
Sbjct: 116 YEYKLRWLQAVHAWIAQELQRHPKLIVMGDFNIAPDARDVHDPEVWNENHILTSTAERGA 175

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
            QKL  +G  D  R  +D   ++S+WDY A  + +N G+RID  ++S    +   ++ ID
Sbjct: 176 LQKLLQLGLHDGFRLHNDEAGVFSWWDYRAAGFRRNLGLRIDLTLVSDALKAGAVASGID 235

Query: 243 TKPRGWTKPSDHTPVIVSL 261
            +PR W +PSDH P  V +
Sbjct: 236 REPRTWERPSDHAPAWVEI 254


>gi|218259778|ref|ZP_03475367.1| hypothetical protein PRABACTJOHN_01026 [Parabacteroides johnsonii
           DSM 18315]
 gi|218224906|gb|EEC97556.1| hypothetical protein PRABACTJOHN_01026 [Parabacteroides johnsonii
           DSM 18315]
          Length = 253

 Score =  197 bits (501), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 76/260 (29%), Positives = 131/260 (50%), Gaps = 12/260 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60
           + + T+NVN +RA +   L  W+ +  PD++CLQETK +   +P E  ++L Y   + + 
Sbjct: 1   MKIITYNVNGLRAAVGKGLPEWLAQEQPDVLCLQETKLQPDQYPAEAFEALGYKAWLFSA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GVAILS+ +P  +   +  +  D + RFI A F      L + ++Y P G    
Sbjct: 61  QKKGYSGVAILSRREPDHVEYGMGIEKYDNEGRFIRADFG----DLSVISVYHPSG-TSG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   K+ W++ F  +  +  +    LI  GDYNI  +P D ++P+    ++ F  E R
Sbjct: 116 DERQAFKMEWLEDFQNYVVELQKSRPKLILCGDYNICHEPIDIHDPVRNATNSGFLPEER 175

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           +   +  + G+ D  R  +     Y++W Y   + +KNKG RID+ M+S    + +  A 
Sbjct: 176 EWMTRFLDAGYIDTFRLLNPDKQEYTWWSYRFSARAKNKGWRIDYCMVSEPMKAQVEKAY 235

Query: 241 IDTKPRGWTKPSDHTPVIVS 260
           I  +       SDH P ++ 
Sbjct: 236 ILNEA----VHSDHCPAVIE 251


>gi|170717538|ref|YP_001784627.1| exonuclease III [Haemophilus somnus 2336]
 gi|168825667|gb|ACA31038.1| exodeoxyribonuclease III [Haemophilus somnus 2336]
          Length = 267

 Score =  197 bits (500), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 80/267 (29%), Positives = 123/267 (46%), Gaps = 8/267 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L   +++  PD+I LQE K  D++FP+  ++ L YHI   GQK
Sbjct: 1   MKFISFNINGLRARPHQLDRIVEKYQPDVIGLQEIKVSDEDFPYNLVEHLGYHIYHHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122
            + GVA+L K +P  I      DD + Q R I A    +   L + N Y P G      T
Sbjct: 61  GHYGVALLLKQEPKVIRRGFSTDDENAQKRIIMADLETDFGLLTVINGYFPQGENRQHET 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  +      +  Q  +   P++  GD NI P         +     +      F 
Sbjct: 121 KFPAKEKFYADLQHYVEQEHDRNNPILIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+   +L N G  D  R  + T +  +S++DY +  +  N+G+RIDHI+++      
Sbjct: 181 PEEREWINRLYNYGLIDTFRHKNPTINDQFSWFDYRSKGFDDNRGLRIDHILVNQLLLER 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262
              A I    R   KPSDH P+     
Sbjct: 241 CVDAGIAFDIRAMEKPSDHAPIWAEFK 267


>gi|83593119|ref|YP_426871.1| exodeoxyribonuclease III [Rhodospirillum rubrum ATCC 11170]
 gi|83576033|gb|ABC22584.1| Exodeoxyribonuclease III [Rhodospirillum rubrum ATCC 11170]
          Length = 266

 Score =  197 bits (500), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 101/266 (37%), Positives = 149/266 (56%), Gaps = 5/266 (1%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +V++AT+NVNS++AR+ NL  W+   +PD+  LQE K  D+ FP   +++L Y +   GQ
Sbjct: 1   MVSIATFNVNSVKARLPNLLDWLGTRSPDVALLQEIKCLDEAFPRAEIEALGYRLAVHGQ 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF--TINTQTLRIGNLYLPHGNPIT 120
           K+YNGVAILS+    E+   LPG D        +A +   +     R+  LYLP+GNP+ 
Sbjct: 61  KAYNGVAILSRLPLSEVTARLPGLDGAPAEDDDQARYLEAVVDGRFRVCCLYLPNGNPVE 120

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLI---FAGDYNIIPQPHDCYNPIIWENDACFTL 177
             +           L   +  L  + P       GD+N+ P   D Y+P  W NDA    
Sbjct: 121 EDRKFGYKLAWMDRLIVRATHLMRDFPDTPVILGGDFNVCPDDLDVYDPAGWANDALCRP 180

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
           E RQ F+ L  +G+TDA+RA +    L++FWDY A +W K+ G+RIDH++L+P A   L 
Sbjct: 181 ETRQRFRALVFLGYTDALRALNPGAPLFTFWDYQAGAWQKDHGLRIDHLLLNPAAADRLS 240

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +A +D   RG  K SDH P  V+L++
Sbjct: 241 AAGVDRATRGHAKSSDHAPSWVTLEL 266


>gi|58697046|ref|ZP_00372507.1| exodeoxyribonuclease III [Wolbachia endosymbiont of Drosophila
           simulans]
 gi|225630665|ref|YP_002727456.1| exodeoxyribonuclease III [Wolbachia sp. wRi]
 gi|58536687|gb|EAL59975.1| exodeoxyribonuclease III [Wolbachia endosymbiont of Drosophila
           simulans]
 gi|225592646|gb|ACN95665.1| exodeoxyribonuclease III [Wolbachia sp. wRi]
          Length = 259

 Score =  197 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 90/260 (34%), Positives = 149/260 (57%), Gaps = 1/260 (0%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           ++ +ATWNVNSIR R++ L ++I ++  DI+ LQE K  ++ FP+  ++ L Y     GQ
Sbjct: 1   MLKIATWNVNSIRKRVNQLCSFIVDSQIDIVLLQEIKCTEEQFPYAEIEKLGYEYAIYGQ 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
            + NGV +LSKY  +E    +   +   +AR+IE     N Q +R+G++Y+P+G    S 
Sbjct: 61  VARNGVCVLSKYPILEKFK-IDIVEGYQEARYIECIIKHNNQKVRVGSVYVPNGQSPDSQ 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
            ++ K+ +        S  L+ EE  I AGDYN+ P   D ++  +     CF +  R+ 
Sbjct: 120 AFEYKLKFFDNLYERMSTLLKNEELTIIAGDYNVAPDEIDVFDSNLLNGQVCFHIREREK 179

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
            + + N+GF DA R +H     +++W Y  +S   N+G+RID+++LSP+A   L +  ID
Sbjct: 180 LRAILNLGFKDAFRISHPNLQQFTWWHYQGNSLRNNQGMRIDYMLLSPQAVDKLETCYID 239

Query: 243 TKPRGWTKPSDHTPVIVSLD 262
            + R    PSDHTPV+ +++
Sbjct: 240 DRLRKLENPSDHTPVVCAIE 259


>gi|237740967|ref|ZP_04571448.1| exodeoxyribonuclease III [Fusobacterium sp. 4_1_13]
 gi|294784430|ref|ZP_06749721.1| exodeoxyribonuclease III [Fusobacterium sp. 3_1_27]
 gi|229431011|gb|EEO41223.1| exodeoxyribonuclease III [Fusobacterium sp. 4_1_13]
 gi|294488002|gb|EFG35357.1| exodeoxyribonuclease III [Fusobacterium sp. 3_1_27]
          Length = 253

 Score =  197 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 75/261 (28%), Positives = 113/261 (43%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN IRA I      +  E N DI CLQETK        E L+  + +     +
Sbjct: 1   MKLISWNVNGIRAAIKKGFLDYFNEQNADIFCLQETKLSAGQLDLE-LKGYHQYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +P+ +   L  ++ D + R I   F                   +   
Sbjct: 60  KGYSGTAIFTKQEPLTVSYGLGIEEHDKEGRVITLEFEKFYMVTVYTPNSKDELLRLDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +   R   + LE ++P++  GD N+  +  D  NP     +A FT E R  
Sbjct: 120 M------TWEDEFRKYLKNLEKKKPVVVCGDLNVAHEEIDLKNPKTNRRNAGFTDEERGK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L + GF D  R  +     +YS+W Y   +   N G RID+ ++S      L  A I
Sbjct: 174 FTELLDSGFIDTFRYFYPNLEQVYSWWSYRGRARENNAGWRIDYFVVSKGLEKNLVDAEI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            T+  G    SDH PV++ LD
Sbjct: 234 HTQIEG----SDHCPVVLILD 250


>gi|34763743|ref|ZP_00144662.1| Exodeoxyribonuclease III [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|27886479|gb|EAA23735.1| Exodeoxyribonuclease III [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
          Length = 253

 Score =  197 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 75/261 (28%), Positives = 113/261 (43%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN IRA I      +  E N DI CLQETK        E L+  + +     +
Sbjct: 1   MKLISWNVNGIRAAIKKGFLDYFNEQNADIFCLQETKLSAGQLDLE-LKGYHQYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +P+ +   L  ++ D + R I   F                   +   
Sbjct: 60  KGYSGTAIFTKQEPLSVSYGLGIEEHDKEGRVITLEFEKFYMVTVYTPNSKDELLRLDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +   R   + LE ++P++  GD N+  +  D  NP     +A FT E R  
Sbjct: 120 M------TWEDEFRKYLKNLEKKKPVVVCGDLNVAHEEIDLKNPKTNRRNAGFTDEERGK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L + GF D  R  +     +YS+W Y   +   N G RID+ ++S      L  A I
Sbjct: 174 FTELLDSGFVDTFRYFYPNLEQVYSWWSYRGRARENNAGWRIDYFVVSKGLEKNLVDAEI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            T+  G    SDH PV++ LD
Sbjct: 234 HTQIEG----SDHCPVVLILD 250


>gi|15678240|ref|NP_275355.1| exodeoxyribonuclease [Methanothermobacter thermautotrophicus str.
           Delta H]
 gi|2621258|gb|AAB84718.1| exodeoxyribonuclease [Methanothermobacter thermautotrophicus str.
           Delta H]
          Length = 257

 Score =  197 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 65/266 (24%), Positives = 110/266 (41%), Gaps = 12/266 (4%)

Query: 1   MSVVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           M+V+ + +WNVN +RA        W  E  PDI+CLQE K   +  P +      Y    
Sbjct: 1   MTVLKIISWNVNGLRAVHRKGFLKWFMEEKPDILCLQEIKAAPEQLPRKLRHVEGYRSFF 60

Query: 60  CG--QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
               +K Y+GVA+ +K  P  +      +  D + R   A F        + N+Y P+G 
Sbjct: 61  TPAERKGYSGVAMYTKVPPSSLREGFGVERFDTEGRIQIADFD----DFLLYNIYFPNGK 116

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
                    K+ +   FL   ++  +    +I  GD+N   +  D   P    N + F  
Sbjct: 117 MSEER-LKYKLEFYDAFLEDVNRERDSGRNVIICGDFNTAHREIDLARPKENSNVSGFLP 175

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
             R    K    G+ D  R  +     Y++W Y   +  +N G R+D+  ++ E    + 
Sbjct: 176 VERAWIDKFIENGYVDTFRMFNSDPGQYTWWSYRTRARERNVGWRLDYFFVNEEFKGKVK 235

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263
            + I +   G    SDH P+ + +++
Sbjct: 236 RSWILSDVMG----SDHCPIGLEIEL 257


>gi|312961228|ref|ZP_07775733.1| exodeoxyribonuclease III [Pseudomonas fluorescens WH6]
 gi|311284886|gb|EFQ63462.1| exodeoxyribonuclease III [Pseudomonas fluorescens WH6]
          Length = 264

 Score =  197 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 106/262 (40%), Positives = 152/262 (58%), Gaps = 5/262 (1%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           M  + +AT+N+N +RAR+ N+  W+    PDI+CLQE K     FP+   ++  Y     
Sbjct: 1   MKALKIATFNLNGLRARLPNVLQWLAREQPDIVCLQELKLPQSLFPYADFEAAGYGAICL 60

Query: 61  GQKSYNGVAILSKY-QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
           GQ S+NGVAIL++  QP+E    LPGDD D Q+R+IEA        + +G LYLP+GNP 
Sbjct: 61  GQASWNGVAILARDAQPLESRRGLPGDDSDNQSRYIEAAV----HGVLVGCLYLPNGNPQ 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K+D K++W +R + +A      E P++ AGD+N++P   D YNP  W  DA    E 
Sbjct: 117 PGPKFDYKLAWFERLIDYAGALQASEHPVLLAGDFNVVPTDLDIYNPRSWLKDALLQPES 176

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R  +Q+L   G+TDA+R  +    +Y+FWDY+   W KN G+RIDH++L+P  T  L  A
Sbjct: 177 RACYQRLLAQGWTDALRHLYPDERVYTFWDYFRQHWQKNSGLRIDHLLLNPALTPYLKDA 236

Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261
            +D   R     SDH P  + L
Sbjct: 237 GVDAWVRNEPHASDHAPTWIQL 258


>gi|42520813|ref|NP_966728.1| exodeoxyribonuclease III [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|42410553|gb|AAS14662.1| exodeoxyribonuclease III [Wolbachia endosymbiont of Drosophila
           melanogaster]
          Length = 259

 Score =  197 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 89/260 (34%), Positives = 147/260 (56%), Gaps = 1/260 (0%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           ++ +ATWNVNSIR R++ L ++I ++  DI+ LQE K  ++ FP+  ++ L Y     GQ
Sbjct: 1   MLKIATWNVNSIRKRVNQLCSFIVDSQIDIVLLQEIKCTEEQFPYAEIEKLGYEYAIYGQ 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
            + NGV +LSKY  +E    +   +   +AR+IE         +R+G++Y+P+G    S 
Sbjct: 61  VARNGVCVLSKYPILEKFK-IDIVESHQEARYIECVIKYTNSKIRVGSVYVPNGQSPDSH 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
            ++ K+ +        S  L+ EE  I AGDYNI P   D ++  +     CF +  R+ 
Sbjct: 120 AFEYKLKFFDNLYERMSTLLKNEELTIIAGDYNIAPDEIDVFDSNLLNGQVCFHIREREK 179

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
            + + N+GF DA R +H     +++W Y  +S   N+G+RID+++LSP+A   L +  ID
Sbjct: 180 LRAILNLGFKDAFRISHPNLQQFTWWHYQGNSLRNNQGMRIDYMLLSPQAVDKLETCYID 239

Query: 243 TKPRGWTKPSDHTPVIVSLD 262
            + R    PSDHTPV+ +++
Sbjct: 240 DRLRKLENPSDHTPVVCAIE 259


>gi|256820279|ref|YP_003141558.1| exodeoxyribonuclease III Xth [Capnocytophaga ochracea DSM 7271]
 gi|256581862|gb|ACU92997.1| exodeoxyribonuclease III Xth [Capnocytophaga ochracea DSM 7271]
          Length = 254

 Score =  197 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 83/260 (31%), Positives = 131/260 (50%), Gaps = 14/260 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY---HIET 59
           + + ++NVN IRA +    A W+K  NPD++CLQE K  +   P E    L Y   +  +
Sbjct: 1   MKIISYNVNGIRAALTKGFAEWLKSANPDVLCLQEIKATEDQIPTEVFSELGYKYQYYHS 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GVAILSK +P  +      D +D + R + A F      L + +LYLP G   
Sbjct: 61  AEKKGYSGVAILSKIEPKHVEIGTGIDYMDKEGRVLRADFET----LSVMSLYLPSGTNP 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                D K++++  F ++  +  +    L+  GDYNI  +  D ++PI   N + F    
Sbjct: 117 DR--LDFKLTFMADFKKYIDKLKQKVPNLVICGDYNICHEAIDIHDPIRNANVSGFLPIE 174

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R+   K    GF D+ R  H   H YS+W Y A++ + NKG RID+ ++S    + +  A
Sbjct: 175 REWLDKFMKSGFIDSFRYFHKEAHQYSWWSYRANARNNNKGWRIDYHLVSAPLENRMERA 234

Query: 240 RIDTKPRGWTKPSDHTPVIV 259
            I  +     K SDH P+++
Sbjct: 235 LILPEA----KHSDHCPILL 250


>gi|207724128|ref|YP_002254526.1| exodeoxyribonuclease III protein [Ralstonia solanacearum MolK2]
 gi|206589337|emb|CAQ36299.1| exodeoxyribonuclease III protein [Ralstonia solanacearum MolK2]
          Length = 269

 Score =  197 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 92/266 (34%), Positives = 141/266 (53%), Gaps = 8/266 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPD-----IICLQETKTEDKNFPFETLQSLNYHIE 58
           + VATWNVNS++ R+ ++  W+ E   D     ++CLQE K  D  +P   L +  Y   
Sbjct: 1   MRVATWNVNSLKVRLPHVLQWLGEREADATPIDLLCLQELKLPDDRYPLAELDAAGYASL 60

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDV---QARFIEATFTINTQTLRIGNLYLPH 115
             GQK+YNGVAIL++   +     +  +       Q R + AT+ +    +R+ + Y P+
Sbjct: 61  FTGQKTYNGVAILARKAAMPEGRDVIKNIPGFADEQQRIVAATYDVAGGPVRVISAYFPN 120

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
           G  + S K   K+ W+     +    ++    L+  GD+NI P   D ++P  WE     
Sbjct: 121 GQALDSDKMVYKMRWLAALQDWLKAEMDAHPRLMLLGDFNIAPDDRDVHDPKKWEGMNLV 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
           + E R +F+ L++ G  DA R       L+S+WDY   ++ +N G+RIDHI+LSPE    
Sbjct: 181 SPEERAAFRALESAGLVDAFRMFEQADKLFSWWDYRLFAFKRNAGLRIDHILLSPELAQR 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
             S  ID  PRGW +PSDHTPV+ +L
Sbjct: 241 CESCHIDRAPRGWEQPSDHTPVVAAL 266


>gi|99035972|ref|ZP_01315016.1| hypothetical protein Wendoof_01000152 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
          Length = 259

 Score =  197 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 89/260 (34%), Positives = 146/260 (56%), Gaps = 1/260 (0%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           ++ +ATWNVNSIR R++ L ++I  +  DI+ LQE K  ++ FP+  ++ L Y     GQ
Sbjct: 1   MLKIATWNVNSIRKRVNQLCSFIVNSQIDIVLLQEIKCTEEQFPYAEIEKLGYEYAIYGQ 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
            + NGV +LSKY  +E    +   +   +AR+IE         +R+G++Y+P+G    S 
Sbjct: 61  VARNGVCVLSKYPILEKFK-IDIVESHQEARYIECVIKYTNSKIRVGSVYVPNGQSPDSH 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
            ++ K+ +        S  L+ EE  I AGDYNI P   D ++  +     CF +  R+ 
Sbjct: 120 AFEYKLKFFDNLYERMSTLLKNEELTIIAGDYNIAPDEIDVFDSNLLNGQVCFHIREREK 179

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
            + + N+GF DA R +H     +++W Y  +S   N+G+RID+++LSP+A   L +  ID
Sbjct: 180 LRAILNLGFKDAFRISHPNLQQFTWWHYQGNSLRNNQGMRIDYMLLSPQAVDKLETCYID 239

Query: 243 TKPRGWTKPSDHTPVIVSLD 262
            + R    PSDHTPV+ +++
Sbjct: 240 DRLRKLENPSDHTPVVCAIE 259


>gi|325919422|ref|ZP_08181448.1| Exodeoxyribonuclease III [Xanthomonas gardneri ATCC 19865]
 gi|325550088|gb|EGD20916.1| Exodeoxyribonuclease III [Xanthomonas gardneri ATCC 19865]
          Length = 326

 Score =  197 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 99/277 (35%), Positives = 158/277 (57%), Gaps = 5/277 (1%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64
            +AT+NVN I +R+ +L  W++   PDI+ LQE K   + FP + ++   Y +   G+KS
Sbjct: 7   KIATFNVNGIHSRLPHLLEWLQREQPDIVGLQELKATQEAFPEQAIRDAGYGVIWQGEKS 66

Query: 65  YNGVAILSKY-QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +NGVA+L++   P+EI   LP D  D Q+R++EA        + +  LYLP+GNP    K
Sbjct: 67  WNGVALLARGADPVEIRRGLPWDPGDRQSRYLEAAI----HGVVVACLYLPNGNPQPGPK 122

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +D K++W +R +R A   +EL  P+   GD+N++P   D Y+P  W  DA    E RQ++
Sbjct: 123 FDYKLAWFQRLIRHAKTLVELPHPVALIGDFNVVPTDADIYDPKGWRKDALLQPESRQAY 182

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             L   G+TD++ A H    +Y+FWDY+   +++++G+RIDH++L+      L  A +D 
Sbjct: 183 AALLQQGWTDSLLAVHGDTPIYTFWDYFRQHFARDRGLRIDHLLLNCTLAPGLQDAGVDK 242

Query: 244 KPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
             R   K SDH P  +S+ +P+   +    T    KP
Sbjct: 243 WVRALEKASDHAPTWISVRVPDAVAEAVVDTEAASKP 279


>gi|256846719|ref|ZP_05552175.1| exodeoxyribonuclease III [Fusobacterium sp. 3_1_36A2]
 gi|256717939|gb|EEU31496.1| exodeoxyribonuclease III [Fusobacterium sp. 3_1_36A2]
          Length = 253

 Score =  197 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 75/261 (28%), Positives = 113/261 (43%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN IRA I      +  E N DI CLQETK        E L+  + +     +
Sbjct: 1   MKLISWNVNGIRAAIKKGFLDYFNEQNADIFCLQETKLSAGQLDLE-LKGYHQYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +P+ +   L  ++ D + R I   F                   +   
Sbjct: 60  KGYSGTAIFTKQEPLSVSYGLGIEEHDKEGRVITLEFEKFYMVTVYTPNSKDELLRLDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +   R   + LE ++P++  GD N+  +  D  NP     +A FT E R  
Sbjct: 120 M------TWEDEFRKYLKNLEKKKPVVVCGDLNVAHEEIDLKNPKTNRRNAGFTDEERGK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L + GF D  R  +     +YS+W Y   +   N G RID+ ++S      L  A I
Sbjct: 174 FTELLDSGFIDTFRYFYPNLEQVYSWWSYRGRARENNAGWRIDYFVVSKGLEKNLVDAEI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            T+  G    SDH PV++ LD
Sbjct: 234 HTQIEG----SDHCPVVLILD 250


>gi|332173328|gb|AEE22582.1| exodeoxyribonuclease III [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 269

 Score =  197 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 78/268 (29%), Positives = 130/268 (48%), Gaps = 9/268 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N IRAR+H L A I ++ PDII LQE K  +  FP   ++++ Y +   GQK
Sbjct: 1   MKIISFNINGIRARLHQLKALIDKHQPDIIGLQEIKVHNDMFPVADVEAMGYKVYFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLD-VQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121
           ++ GVA+L K +P ++    P DD D  +   + +    N +T+R+ N Y P G   +  
Sbjct: 61  AHYGVAMLCKEEPSDVQYGFPTDDEDAQRRMIMVSYPMPNGETVRVLNGYFPQGENRSHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175
           TK+  K  + +    + +     +E ++  GD NI                 +      F
Sbjct: 121 TKFPAKRKYYEDLSTYLNTHHTPDENVVVMGDVNISHTDLDIGIGEPNRKRWLQTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R     L + GF+D  R  +   +  +S++DY +  +  N+G+RID I+ + +   
Sbjct: 181 LPEERLWLNDLIDWGFSDGFRTLNPETNEHFSWFDYRSKGFLDNRGLRIDLILATKKLHE 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
            L  A ID + RG  KPSDH P+     
Sbjct: 241 SLSDAGIDYELRGIEKPSDHAPIWAEYK 268


>gi|326331009|ref|ZP_08197308.1| exodeoxyribonuclease III [Nocardioidaceae bacterium Broad-1]
 gi|325951220|gb|EGD43261.1| exodeoxyribonuclease III [Nocardioidaceae bacterium Broad-1]
          Length = 260

 Score =  197 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 74/262 (28%), Positives = 124/262 (47%), Gaps = 8/262 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+NSIR+RI  + A+++ ++ D++ LQETK +    P   L++  Y + + G  
Sbjct: 1   MRIATWNINSIRSRIDRVEAFVERHSIDVLALQETKAKPDQIPTMGLEARGYEVASVGYD 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVA++S+    +I     G           A        +R+ ++Y+P+G       
Sbjct: 61  QWNGVALISRVGLSDIQVGFEGMPSFKDVAEARALTATCG-GVRVTSVYVPNGRKPDDPH 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W+       +     + P    GD+N+ P   DC++P  +      T   R + 
Sbjct: 120 YAYKLEWLAA--LQKAATAWYDGPSAMVGDWNVCPFDEDCFDPKQFVGKTHLTPAERDA- 176

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
                  F D +R        Y+++DYY   + +N+G+RID ++ SP   S +  A +D 
Sbjct: 177 FFAIEKDFKDVVRPFVPGPEAYTYFDYYRQRFERNRGLRIDFVLGSPSFASRVTDAFVDL 236

Query: 244 KPR----GWTKPSDHTPVIVSL 261
             R    G   PSDH PVIV L
Sbjct: 237 DERNPAIGTGAPSDHAPVIVDL 258


>gi|56416778|ref|YP_153852.1| exodeoxyribonuclease III [Anaplasma marginale str. St. Maries]
 gi|56388010|gb|AAV86597.1| exodeoxyribonuclease III [Anaplasma marginale str. St. Maries]
          Length = 276

 Score =  197 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 91/272 (33%), Positives = 145/272 (53%), Gaps = 13/272 (4%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           ++ + TWNVNS+R R+ +L + + E++ DI  LQETK  D  FP   L+ L Y     GQ
Sbjct: 1   MIRILTWNVNSVRKRVAHLCSVLTEHHVDIALLQETKCTDDQFPLAELEDLGYKCYIHGQ 60

Query: 63  KSYNGVAILSKYQPIEIVTH-------------LPGDDLDVQARFIEATFTINTQTLRIG 109
           KS NGVAILSKY  +  + +               G     +AR++E         +R+ 
Sbjct: 61  KSRNGVAILSKYPIVGELCNTVFDAEEEIGTVQDTGSYSVTEARYLECLVDYQDVKVRVA 120

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
           ++Y+P+G  + +  +  K+++++       + L  E+ L+  GDYN+ P   D Y+    
Sbjct: 121 SVYVPNGQEVDTETFVYKLNFLRCLKARLLKLLAREDWLVIGGDYNVAPDDIDVYDAQAL 180

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
           +   CF  + R   +++ ++GFTDA R  H+    +S+W+Y   SW +N+G+RIDH++LS
Sbjct: 181 DGKLCFHPKERAGLREILHLGFTDAFRILHEGKQEFSWWNYREGSWQRNRGMRIDHLLLS 240

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           P A   L    I +  RG   PSDH PV+  L
Sbjct: 241 PNAVDKLVECSILSSVRGLESPSDHAPVMCVL 272


>gi|304320984|ref|YP_003854627.1| Exodeoxyribonuclease III [Parvularcula bermudensis HTCC2503]
 gi|303299886|gb|ADM09485.1| Exodeoxyribonuclease III [Parvularcula bermudensis HTCC2503]
          Length = 273

 Score =  197 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 104/264 (39%), Positives = 147/264 (55%), Gaps = 7/264 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + ++++NVNSI+AR+  +  W  +  PD+  LQE K     FP    +   YH+E  GQK
Sbjct: 1   MIISSFNVNSIKARLPRILEWFDDRQPDVTVLQEIKCVTDAFPAAPFEDRGYHVEVFGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVA+LSK  P +++  +PG D D                +R+G LYLP+GNP    K
Sbjct: 61  TYNGVALLSKTPPEDVLRGVPGFDDDNARYIEALIPHDQGAPVRVGGLYLPNGNPAPGPK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           YD K++W+  F   A   L  EE +   GDYN+IP P   Y P  W  DA F LE R++F
Sbjct: 121 YDYKLAWMAAFEDHARDLLAQEEAVCLLGDYNVIPDPSGVYAPDRWTEDALFRLETRKAF 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           ++L N+G+ DA+    D    Y+FWDY   +W K+ G+RIDH +LSP+A   L    +D 
Sbjct: 181 RRLLNLGYVDALAQVKDAP-FYTFWDYQRGAWDKDHGLRIDHCLLSPQAADRLTGGDVDR 239

Query: 244 KPRG------WTKPSDHTPVIVSL 261
           + R         KPSDH PV +S+
Sbjct: 240 QVRDPALGNQDAKPSDHVPVWISI 263


>gi|114562597|ref|YP_750110.1| exonuclease III [Shewanella frigidimarina NCIMB 400]
 gi|114333890|gb|ABI71272.1| Exodeoxyribonuclease III [Shewanella frigidimarina NCIMB 400]
          Length = 268

 Score =  197 bits (500), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 84/267 (31%), Positives = 132/267 (49%), Gaps = 9/267 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N IRAR+H L A I  ++PDII LQETK  D+ FP   ++++ Y +   G K
Sbjct: 1   MKIVSFNINGIRARLHQLQALIDSHSPDIIGLQETKVHDEAFPVADVEAMGYKVHYHGGK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLD-VQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121
           ++ GVA+LSK +P+ ++     DD D  +   I      N + L + N Y P G  I   
Sbjct: 61  AHYGVAMLSKAEPVNVIKGFETDDEDAQRRLIIGQFKQDNGRILTVFNGYFPQGESIHHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175
           TKY  K  + +  +    +    +E +   GD NI P   D           +      F
Sbjct: 121 TKYPAKRKFYQDLMVHLEKHHSADEDIAIIGDINISPTDLDIGIGEVNAKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R+   +LQ  GF D+ R  H      YS++DY +  +  N+G+RID I+++     
Sbjct: 181 QPEEREWLARLQQWGFIDSFRQLHPTRTERYSWFDYRSKGFDDNRGLRIDVILVTESMLP 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261
            L  + +D + RG  KPSDH P+  + 
Sbjct: 241 RLVESDVDYELRGIDKPSDHAPIWSTF 267


>gi|255020178|ref|ZP_05292247.1| Exodeoxyribonuclease III [Acidithiobacillus caldus ATCC 51756]
 gi|254970320|gb|EET27813.1| Exodeoxyribonuclease III [Acidithiobacillus caldus ATCC 51756]
          Length = 258

 Score =  196 bits (499), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 82/259 (31%), Positives = 138/259 (53%), Gaps = 4/259 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + +WNVNS++ R+  +  ++++  PD++CLQETK  D  FP + L+   Y     GQ 
Sbjct: 1   MQITSWNVNSLKVRLPQVQTFLEKFQPDLLCLQETKLPDDRFPTDHLREQGYAALYHGQS 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVA+LS+    +        + + QAR   AT      ++R+ N+Y+P+G  + S K
Sbjct: 61  AYNGVAMLSRAPLADPECGFADGEAEPQARLCAATCA----SVRVVNVYVPNGQALDSDK 116

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W+     +    L     L+  GD+NI P   D ++   W  D   +   R + 
Sbjct: 117 YAFKLRWLAALREYLRDALARWPRLVVLGDFNIAPGDGDVFDAAAWGEDILCSPAERAAL 176

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             L+++GF DA RA +     +++WDY A S+ +N+G+RID I++S      +    +  
Sbjct: 177 TALEDLGFVDAYRALNPDGREFTWWDYRAASFRRNRGLRIDLILVSTALWPQVRQVLVHR 236

Query: 244 KPRGWTKPSDHTPVIVSLD 262
           + RG  +PSDH PV + L+
Sbjct: 237 EERGAERPSDHAPVSLFLE 255


>gi|319788428|ref|YP_004147903.1| exodeoxyribonuclease III [Pseudoxanthomonas suwonensis 11-1]
 gi|317466940|gb|ADV28672.1| exodeoxyribonuclease III [Pseudoxanthomonas suwonensis 11-1]
          Length = 256

 Score =  196 bits (499), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 89/259 (34%), Positives = 140/259 (54%), Gaps = 6/259 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + VA+WNVNS+  R+ +L  W++   PDI+ LQETK ED  FP  TL +L Y     GQK
Sbjct: 1   MKVASWNVNSLNVRMPHLEQWLRAFAPDIVGLQETKLEDHKFPDSTLAALGYRSVFSGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAILS+  P +++  +PG + + +              LR+ NLY+ +G  + + K
Sbjct: 61  TYNGVAILSREAPRDVLVGVPGFEHEHRRAISATIGD-----LRVVNLYVVNGQDVGTDK 115

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP-IIWENDACFTLEVRQS 182
           Y+ K++W+     +  Q       L+  GD+NI P   D ++P +  E     +   R +
Sbjct: 116 YELKLAWLAAVRTWLEQEAREHPRLVVLGDFNIAPDERDVHDPAVWNETHILTSAAERAA 175

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
            + L  +G  D  R  HD   ++S+WDY   ++ +N G+RID  ++S      + +A ID
Sbjct: 176 LRDLLALGLHDGYRLLHDEGGVFSWWDYRMAAFRRNLGLRIDLTLVSEALRGQVVAAGID 235

Query: 243 TKPRGWTKPSDHTPVIVSL 261
            +PR W +PSDH P  + L
Sbjct: 236 REPRTWERPSDHAPAWIEL 254


>gi|227502024|ref|ZP_03932073.1| exodeoxyribonuclease III [Corynebacterium accolens ATCC 49725]
 gi|227077308|gb|EEI15271.1| exodeoxyribonuclease III [Corynebacterium accolens ATCC 49725]
          Length = 269

 Score =  196 bits (499), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 81/267 (30%), Positives = 133/267 (49%), Gaps = 8/267 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + TWN+NS+R R       +  ++ D++CLQETK +D  FP    +   YH+   G  
Sbjct: 1   MRITTWNINSVRTRAQRALDLLHTHDIDVLCLQETKVKDDKFPRVAFEDAGYHVTCHGLN 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT-----QTLRIGNLYLPHGNP 118
            +NGVAI+SK QP E+ T  P      +                 + + I +LY+P+G  
Sbjct: 61  QWNGVAIISKEQPEEVFTGFPHQPGFAKDPEKPQDREARALGARIRGVEIWSLYIPNGRE 120

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
           IT   YD K+ ++ +  R+A+ R + +  L+  GD+NI P+  D ++   +      T  
Sbjct: 121 ITDRHYDYKLDFLYQLARYAAGRAQSK--LLLTGDFNIAPRDEDVWDIEAFRGKTHVTEP 178

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
            R +FQ L+  G  +  R   +    Y+++DY    + KN+G+RID  + SP     +  
Sbjct: 179 ERAAFQMLEEAGLEEVTRRFTE-DQRYTYFDYKGMRFHKNEGMRIDFQLASPPLAKHVTG 237

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           AR+D + R   K SDH P+    D+P+
Sbjct: 238 ARVDMEERAGEKTSDHCPLHADFDLPD 264


>gi|160889848|ref|ZP_02070851.1| hypothetical protein BACUNI_02279 [Bacteroides uniformis ATCC 8492]
 gi|270294104|ref|ZP_06200306.1| exodeoxyribonuclease III [Bacteroides sp. D20]
 gi|317478856|ref|ZP_07938007.1| exodeoxyribonuclease III [Bacteroides sp. 4_1_36]
 gi|156860840|gb|EDO54271.1| hypothetical protein BACUNI_02279 [Bacteroides uniformis ATCC 8492]
 gi|270275571|gb|EFA21431.1| exodeoxyribonuclease III [Bacteroides sp. D20]
 gi|316905032|gb|EFV26835.1| exodeoxyribonuclease III [Bacteroides sp. 4_1_36]
          Length = 254

 Score =  196 bits (499), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 83/261 (31%), Positives = 137/261 (52%), Gaps = 12/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60
           + + T+NVN +RA +      W+ +  PD++CLQETK + + +P E L +L Y  ++ + 
Sbjct: 1   MKIITYNVNGLRAAVTKGFPEWLAQEQPDVLCLQETKLQPEQYPAEALDALGYKHYLYSA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GVAILSK +P  +   +  ++ D + RFI A F      + + ++Y P G    
Sbjct: 61  QKKGYSGVAILSKQEPDHVEYGMGIEEYDNEGRFIRADFG----DVSVVSVYHPSG-TSG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   K+ W+++F  +  +       LI  GDYNI  +  D ++PI    ++ F  E R
Sbjct: 116 DERQAFKMVWLEKFQEYVLELERTRPKLILCGDYNICHEAIDIHDPIRNATNSGFLPEER 175

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           +   +  N GF D+ R  H     Y++W Y  +S +KNKG RID+ M+S     +L  AR
Sbjct: 176 EWMTRFLNAGFIDSFRWLHPDKQEYTWWSYRFNSRAKNKGWRIDYCMVSEPVRPMLKEAR 235

Query: 241 IDTKPRGWTKPSDHTPVIVSL 261
           I     G    SDH P+++ +
Sbjct: 236 IL----GDVVHSDHCPMLLEI 252


>gi|293392089|ref|ZP_06636423.1| exonuclease III [Aggregatibacter actinomycetemcomitans D7S-1]
 gi|290952623|gb|EFE02742.1| exonuclease III [Aggregatibacter actinomycetemcomitans D7S-1]
          Length = 267

 Score =  196 bits (499), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 79/267 (29%), Positives = 122/267 (45%), Gaps = 8/267 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +RAR H L   I +  PD++ LQE K  D+ FP++ +  L YH+   GQK
Sbjct: 1   MKIMSFNINGLRARPHQLEEIIHKYQPDVLGLQEIKVADEVFPYDLVDHLGYHVNHFGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122
            + GVA+LSK  P+ +    P DD + Q R I          L + N Y P G       
Sbjct: 61  GHYGVALLSKQVPLSVRKGFPTDDEEAQKRIIMIDLETKFGQLTVINGYFPQGESREHPT 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  +     R+  Q    + P+I  GD NI P         +     +      F 
Sbjct: 121 KFPAKQKFYADLQRYLEQDHNAQNPVIIMGDMNISPSDLDIGIGEENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+ +Q+L   G  D  R  + T +  +S++DY +  +  N+G+RIDHI+ +    + 
Sbjct: 181 PEEREWYQRLYAYGLEDTFRHMNPTVNDKFSWFDYRSKGFDDNRGLRIDHILANKALVAH 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262
                I    R   KPSDH P+     
Sbjct: 241 CVDTGIALDIRAMNKPSDHAPIWAEFK 267


>gi|187929032|ref|YP_001899519.1| exodeoxyribonuclease III Xth [Ralstonia pickettii 12J]
 gi|187725922|gb|ACD27087.1| exodeoxyribonuclease III Xth [Ralstonia pickettii 12J]
          Length = 269

 Score =  196 bits (499), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 95/266 (35%), Positives = 144/266 (54%), Gaps = 8/266 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPD-----IICLQETKTEDKNFPFETLQSLNYHIE 58
           + VATWNVNS++ R+ ++  W+ E   D     ++CLQE K  D  +P   L +  Y   
Sbjct: 1   MRVATWNVNSLKVRLPHVLQWLAEREADATPIDLLCLQELKLPDDRYPLAELDAAGYTSL 60

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDV---QARFIEATFTINTQTLRIGNLYLPH 115
             GQK+YNGVAILS+   +     +  +       Q R + AT+ ++   +R+ + Y+P+
Sbjct: 61  FTGQKTYNGVAILSRKASVPEGRDVVKNIPGFADEQQRIVAATYDVDGGPVRVISAYIPN 120

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
           G  + S K+  K+ W++    + +  L     L+  GD+NI P+  D ++P  WE     
Sbjct: 121 GQALDSDKFVYKLRWLEALQAWLTSELAANPRLMLLGDFNIAPEDRDVHDPKKWEGQNLV 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
           + E R +F+ +Q  G  DA R       L+S+WDY    + +N G+RIDHIMLSPE   L
Sbjct: 181 SPEERAAFRAMQGAGLVDAFRMFEQEDKLFSWWDYRMFGFKRNAGLRIDHIMLSPELAKL 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
             S  ID  PR W +PSDHTPV+ +L
Sbjct: 241 CESCHIDRVPRTWEQPSDHTPVVAAL 266


>gi|120437855|ref|YP_863541.1| exodeoxyribonuclease [Gramella forsetii KT0803]
 gi|117580005|emb|CAL68474.1| exodeoxyribonuclease [Gramella forsetii KT0803]
          Length = 253

 Score =  196 bits (499), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 82/263 (31%), Positives = 128/263 (48%), Gaps = 14/263 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY---HIET 59
           +T+ ++NVN IRA I      W++++NPD++CLQE K + +       +   Y   +   
Sbjct: 1   MTIISYNVNGIRAAIRKGFLDWLQQSNPDVVCLQEIKAQPEQLDLSEFEKAGYPYHYWYP 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GVAILSK +P  +      D +D + R I A F        + +LYLP G  I
Sbjct: 61  ANKKGYSGVAILSKTEPKNVTYGTGIDYMDFEGRSIRADFD----NFSVMSLYLPSGTNI 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +   K      F R+  Q       LI +GDYNI  +  D ++P+  +N + F  E 
Sbjct: 117 NRLELKFKFMD--DFQRYIDQLKLEIPNLIISGDYNICHEAIDIHDPVRLKNVSGFLPEE 174

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R+        GF D+ R  ++    YS+W Y A++ + NKG RID+ ++S      L  A
Sbjct: 175 RKWIDGFMENGFIDSFRHFNEDPDNYSWWSYRANARNNNKGWRIDYNLVSEPLKDRLRRA 234

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
            I  +       SDH PV+V ++
Sbjct: 235 VILPEAY----HSDHCPVLVEIE 253


>gi|299146132|ref|ZP_07039200.1| exodeoxyribonuclease III [Bacteroides sp. 3_1_23]
 gi|298516623|gb|EFI40504.1| exodeoxyribonuclease III [Bacteroides sp. 3_1_23]
          Length = 253

 Score =  196 bits (499), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 82/261 (31%), Positives = 136/261 (52%), Gaps = 12/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60
           + + T+NVN +RA +   L  W+ + NPDI+CLQETK +   +P E  ++L Y  ++ + 
Sbjct: 1   MKIITYNVNGLRAAVSKGLPEWLAQENPDILCLQETKLQPDQYPGEVFEALGYKSYLYSA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GVAIL+K +P  +   +  +  D + RFI A F      L + ++Y P G    
Sbjct: 61  QKKGYSGVAILTKQEPDHVEYGMGMEAYDNEGRFIRADFG----DLSVVSVYHPSG-TSG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   K+ W++ F ++  +  +    LI  GDYNI  +P D ++P+    ++ F  E R
Sbjct: 116 DERQAFKMVWLEDFQKYVMELQKSRPNLILCGDYNICHEPIDIHDPVRNATNSGFLPEER 175

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           +   +  + G+ DA R        Y++W Y  +S +KNKG RID+ M+S     LL  A 
Sbjct: 176 EWMTRFLSAGYVDAFRTLCPEKQEYTWWSYRFNSRAKNKGWRIDYCMVSEPVRPLLKRAY 235

Query: 241 IDTKPRGWTKPSDHTPVIVSL 261
           I  +       SDH P+ + +
Sbjct: 236 ILNEA----VHSDHCPMALEI 252


>gi|237719516|ref|ZP_04549997.1| exodeoxyribonuclease [Bacteroides sp. 2_2_4]
 gi|260174497|ref|ZP_05760909.1| exodeoxyribonuclease [Bacteroides sp. D2]
 gi|293370159|ref|ZP_06616719.1| exodeoxyribonuclease III [Bacteroides ovatus SD CMC 3f]
 gi|315922764|ref|ZP_07919004.1| exodeoxyribonuclease [Bacteroides sp. D2]
 gi|229451376|gb|EEO57167.1| exodeoxyribonuclease [Bacteroides sp. 2_2_4]
 gi|292634656|gb|EFF53185.1| exodeoxyribonuclease III [Bacteroides ovatus SD CMC 3f]
 gi|313696639|gb|EFS33474.1| exodeoxyribonuclease [Bacteroides sp. D2]
          Length = 253

 Score =  196 bits (499), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 81/261 (31%), Positives = 136/261 (52%), Gaps = 12/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60
           + + T+NVN +RA +   L  W+ + NPDI+CLQETK +   +P E  ++L Y  ++ + 
Sbjct: 1   MKIITYNVNGLRAAVSKGLPEWLAQENPDILCLQETKLQPDQYPGEVFEALGYKSYLYSA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GVAIL+K +P  +   +  +  D + RFI A F      L + ++Y P G    
Sbjct: 61  QKKGYSGVAILTKQEPDHVEYGMGMEAYDNEGRFIRADFG----DLSVVSVYHPSG-TSG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   K+ W++ F ++  +  +    LI  GDYNI  +P D ++P+    ++ F  E R
Sbjct: 116 DERQAFKMVWLEDFQKYVMELQKSRPNLILCGDYNICHEPIDIHDPVRNATNSGFLPEER 175

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           +   +  + G+ D+ R        Y++W Y  +S +KNKG RID+ M+S     LL  A 
Sbjct: 176 EWMTRFLSAGYVDSFRTLCPEKQEYTWWSYRFNSRAKNKGWRIDYCMVSEPVRPLLKRAY 235

Query: 241 IDTKPRGWTKPSDHTPVIVSL 261
           I  +       SDH P+ + +
Sbjct: 236 ILNEA----VHSDHCPMALEI 252


>gi|160884274|ref|ZP_02065277.1| hypothetical protein BACOVA_02252 [Bacteroides ovatus ATCC 8483]
 gi|156110013|gb|EDO11758.1| hypothetical protein BACOVA_02252 [Bacteroides ovatus ATCC 8483]
          Length = 253

 Score =  196 bits (499), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 81/261 (31%), Positives = 137/261 (52%), Gaps = 12/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60
           + + T+NVN +RA +   L  W+ + NPDI+CLQETK +   +P E  ++L Y  ++ + 
Sbjct: 1   MKIITYNVNGLRAAVSKGLPEWLAQENPDILCLQETKLQPDQYPGEVFEALGYKSYLYSA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GVAIL+K +P  +   +  +  D + RFI A F      L + ++Y P G    
Sbjct: 61  QKKGYSGVAILTKQEPDHVEYGMGMEAYDNEGRFIRADFG----DLSVVSVYHPSG-TSG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   K++W++ F ++  +  +    LI  GDYNI  +P D ++P+    ++ F  E R
Sbjct: 116 DERQAFKMAWLEDFQKYVMELQKSRPNLILCGDYNICHEPIDIHDPVRNATNSGFLPEER 175

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           +   +  + G+ D+ R        Y++W Y  +S +KNKG RID+ M+S     LL  A 
Sbjct: 176 EWMTRFLSAGYVDSFRTLCPEKQEYTWWSYRFNSRAKNKGWRIDYCMVSEPVRPLLKRAY 235

Query: 241 IDTKPRGWTKPSDHTPVIVSL 261
           I  +       SDH P+ + +
Sbjct: 236 ILNEA----VHSDHCPMALEI 252


>gi|294102589|ref|YP_003554447.1| exodeoxyribonuclease III [Aminobacterium colombiense DSM 12261]
 gi|293617569|gb|ADE57723.1| exodeoxyribonuclease III [Aminobacterium colombiense DSM 12261]
          Length = 261

 Score =  196 bits (499), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 86/264 (32%), Positives = 138/264 (52%), Gaps = 4/264 (1%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           ++ +AT+NVNS+R+R+H L+ W+ +N  D++CLQETKTED+ FP    ++L Y     G+
Sbjct: 1   MLKIATFNVNSVRSRMHILSQWLHDNRVDVLCLQETKTEDQFFPASEFEALGYEAVFKGE 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K+YNGVA+LS +    I+    G +   +              + I N Y+P G  I  +
Sbjct: 61  KAYNGVALLSLHP---IMNPHFGLEDGEEPDPATRIVRGTVLGVHIINTYVPQGKSIDHS 117

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
            Y  K+ +  R      +     + L++ GD N+ P   D  NP    +  CF  ++++ 
Sbjct: 118 DYQYKMRFFDRLKTLFDREYSKADDLLWVGDMNVAPTDIDVTNPGNKRDHVCFHEDIKKK 177

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYY-ADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F++++  GF D  R        +SF+DY   ++  +N G RIDHI+ +           +
Sbjct: 178 FEEIKAWGFIDVFRKYRPGEGEFSFFDYRVKNALERNIGWRIDHILATSSLAHRSEDCYV 237

Query: 242 DTKPRGWTKPSDHTPVIVSLDIPE 265
           D  PRGW KPSDH PV+ + +I E
Sbjct: 238 DRGPRGWEKPSDHAPVVGAFNIDE 261


>gi|325922607|ref|ZP_08184358.1| Exodeoxyribonuclease III [Xanthomonas gardneri ATCC 19865]
 gi|325546902|gb|EGD18005.1| Exodeoxyribonuclease III [Xanthomonas gardneri ATCC 19865]
          Length = 259

 Score =  196 bits (499), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 90/264 (34%), Positives = 139/264 (52%), Gaps = 7/264 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A+WNVNS+  R+ +L  W+    PD++ +QETK ED  FP   L +  Y    CGQK
Sbjct: 1   MKIASWNVNSLNVRLPHLQQWLGTFAPDVVGIQETKLEDHKFPDAALAAAGYRSVFCGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAILS+   +++   +PG D   Q              +RI NLY+ +G  + + K
Sbjct: 61  TYNGVAILSRSPALDVQMGIPGFDDVQQRVIAATVDG-----VRIVNLYVVNGQDVDTDK 115

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP-IIWENDACFTLEVRQS 182
           Y  K+ W+     + +Q L+    L+  GD+NI P   D ++P +  E+    +   R +
Sbjct: 116 YAYKLRWLAAVHEWLAQELQKYPQLMVLGDFNIAPDARDVHDPSVWNEHHILTSTAERAA 175

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
            +KL  +G  DA R  HD    +S+WDY    + +N G+RID  ++S    +    + ID
Sbjct: 176 LEKLLALGLHDAFRLHHDDAEQFSWWDYRQAGFRRNLGLRIDLTLVSDALRARAVESGID 235

Query: 243 TKPRGWTKPSDHTPVIVSL-DIPE 265
            +PR W +PSDH P  V L D+  
Sbjct: 236 REPRTWERPSDHAPAWVRLADLDA 259


>gi|294666217|ref|ZP_06731470.1| exodeoxyribonuclease III [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292603990|gb|EFF47388.1| exodeoxyribonuclease III [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 259

 Score =  196 bits (499), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 87/259 (33%), Positives = 136/259 (52%), Gaps = 6/259 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A+WNVNS+  R+ +L  W+    PD++ +QETK ED  FP   L +L Y    CGQK
Sbjct: 1   MKIASWNVNSLNVRLPHLQQWLAAFAPDVVGIQETKLEDHKFPDAALAALGYRSVFCGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAILS+   +++   +PG D   Q              +RI NLY+ +G  + + K
Sbjct: 61  TYNGVAILSRSPAVDVQMGIPGLDDVQQRVIAATVDG-----VRIINLYVVNGQDVGTDK 115

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN-PIIWENDACFTLEVRQS 182
           Y  K+ W+     + +Q L+    L+  GD+NI P   D ++  +  E+    + + R +
Sbjct: 116 YAYKLRWLAAAHDWIAQELQRYPQLVVLGDFNIAPDARDVHDATVWNEHHILTSTDERAA 175

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
             KL  +G  DA R  +     +S+WDY    + +N G+RID  ++S    +    + ID
Sbjct: 176 LDKLLALGLHDAFRLHNQDAEHFSWWDYRQAGFRRNLGLRIDLTLVSDTLRARAVESGID 235

Query: 243 TKPRGWTKPSDHTPVIVSL 261
            +PR W +PSDH P  V L
Sbjct: 236 REPRTWERPSDHAPAWVRL 254


>gi|325927981|ref|ZP_08189202.1| Exodeoxyribonuclease III [Xanthomonas perforans 91-118]
 gi|325541666|gb|EGD13187.1| Exodeoxyribonuclease III [Xanthomonas perforans 91-118]
          Length = 259

 Score =  196 bits (499), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 87/259 (33%), Positives = 136/259 (52%), Gaps = 6/259 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A+WNVNS+  R+ +L  W+    PD++ +QETK ED  FP   L +L Y    CGQK
Sbjct: 1   MKIASWNVNSLNVRLPHLQQWLAAFAPDVVGIQETKLEDHKFPDAALAALGYRSVFCGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAILS+   +++   +PG D   Q              +RI NLY+ +G  + + K
Sbjct: 61  TYNGVAILSRSPAVDVQMGIPGLDDVQQRVIAATVDG-----VRIINLYVVNGQDVGTDK 115

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN-PIIWENDACFTLEVRQS 182
           Y  K+ W+     + +Q L+    L+  GD+NI P   D ++  +  E+    + + R +
Sbjct: 116 YAYKLRWLAAAHDWIAQELQRYPQLVVLGDFNIAPDARDVHDATVWNEHHILTSTDERAA 175

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
             KL  +G  DA R  +     +S+WDY    + +N G+RID  ++S    +    + ID
Sbjct: 176 LDKLLALGLHDAFRLHNQDAEHFSWWDYRQAGFRRNLGLRIDLTLVSDALRTRAVESGID 235

Query: 243 TKPRGWTKPSDHTPVIVSL 261
            +PR W +PSDH P  V L
Sbjct: 236 REPRTWERPSDHAPAWVRL 254


>gi|21244888|ref|NP_644470.1| exodeoxyribonuclease III [Xanthomonas axonopodis pv. citri str.
           306]
 gi|21110598|gb|AAM39006.1| exodeoxyribonuclease III [Xanthomonas axonopodis pv. citri str.
           306]
          Length = 259

 Score =  196 bits (499), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 88/259 (33%), Positives = 136/259 (52%), Gaps = 6/259 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A+WNVNS+  R+ +L  W+    PD++ +QETK ED  FP   L +L Y    CGQK
Sbjct: 1   MKIASWNVNSLNVRLPHLQQWLAAFAPDVVGIQETKLEDHKFPDAALAALGYRSVFCGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAILS+   I++   +PG D   Q              +RI NLY+ +G  + + K
Sbjct: 61  TYNGVAILSRSPAIDVQMGIPGLDDVQQRVIAATVDG-----VRIINLYVVNGQDVGTDK 115

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN-PIIWENDACFTLEVRQS 182
           Y  K+ W+     + +Q L+    L+  GD+NI P   D ++  +  E+    + + R +
Sbjct: 116 YAYKLRWLAAAHDWIAQELQRYPQLVVLGDFNIAPDARDVHDATVWNEHHILTSTDERAA 175

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
             KL  +G  DA R  +     +S+WDY    + +N G+RID  ++S    +    + ID
Sbjct: 176 LDKLLALGLHDAFRLHNQDADHFSWWDYRQAGFRRNLGLRIDLTLVSDALRTRAVESGID 235

Query: 243 TKPRGWTKPSDHTPVIVSL 261
            +PR W +PSDH P  V L
Sbjct: 236 REPRTWERPSDHAPAWVRL 254


>gi|78049826|ref|YP_366001.1| exodeoxyribonuclease III [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|78038256|emb|CAJ26001.1| exodeoxyribonuclease III [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 263

 Score =  196 bits (499), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 87/259 (33%), Positives = 136/259 (52%), Gaps = 6/259 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A+WNVNS+  R+ +L  W+    PD++ +QETK ED  FP   L +L Y    CGQK
Sbjct: 5   MKIASWNVNSLNVRLPHLQQWLAAFAPDVVGIQETKLEDHKFPDAALAALGYRSVFCGQK 64

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAILS+   +++   +PG D   Q              +RI NLY+ +G  + + K
Sbjct: 65  TYNGVAILSRSPAVDVQMGIPGLDDVQQRVIAATVDG-----VRIINLYVVNGQDVGTDK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN-PIIWENDACFTLEVRQS 182
           Y  K+ W+     + +Q L+    L+  GD+NI P   D ++  +  E+    + + R +
Sbjct: 120 YAYKLRWLAAAHDWIAQELQRYPQLVVLGDFNIAPDARDVHDATVWNEHHILTSTDERAA 179

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
             KL  +G  DA R  +     +S+WDY    + +N G+RID  ++S    +    + ID
Sbjct: 180 LDKLLALGLHDAFRLHNQDAEHFSWWDYRQAGFRRNLGLRIDLTLVSDALRTRAVESGID 239

Query: 243 TKPRGWTKPSDHTPVIVSL 261
            +PR W +PSDH P  V L
Sbjct: 240 REPRTWERPSDHAPAWVRL 258


>gi|255009509|ref|ZP_05281635.1| exodeoxyribonuclease [Bacteroides fragilis 3_1_12]
 gi|313147282|ref|ZP_07809475.1| exodeoxyribonuclease [Bacteroides fragilis 3_1_12]
 gi|313136049|gb|EFR53409.1| exodeoxyribonuclease [Bacteroides fragilis 3_1_12]
          Length = 253

 Score =  196 bits (499), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 84/260 (32%), Positives = 138/260 (53%), Gaps = 12/260 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60
           + + T+NVN +RA +   L  W+ E NPD++CLQETK +   +P E  ++L Y  ++ + 
Sbjct: 1   MKIITYNVNGLRAAVNKGLPEWLAEENPDVLCLQETKLQPDQYPAEAFEALGYKAYLYSA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GVAIL+K +P  I   +  ++ D + RFI A F      L + ++Y P G    
Sbjct: 61  QKKGYSGVAILTKIEPDHIEYGMGIEEYDNEGRFIRADFG----DLSVVSVYHPSG-TSG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   K+ W++ F ++ ++  +    LI  GDYNI  +P D ++P+    ++ F  E R
Sbjct: 116 DERQAFKMVWLEAFQKYVTELRKSRPNLILCGDYNICHEPIDIHDPVRNATNSGFLPEER 175

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           +   +  + GF D+ R  +     Y++W Y  +S +KNKG RID+ M+S    SLL  A 
Sbjct: 176 EWMTRFLSAGFIDSFRTLYPEKQEYTWWSYRFNSRAKNKGWRIDYCMVSEPVRSLLKEAV 235

Query: 241 IDTKPRGWTKPSDHTPVIVS 260
           I          SDH P+ + 
Sbjct: 236 ILNNA----VHSDHCPMALE 251


>gi|89093141|ref|ZP_01166091.1| Exonuclease III [Oceanospirillum sp. MED92]
 gi|89082437|gb|EAR61659.1| Exonuclease III [Oceanospirillum sp. MED92]
          Length = 271

 Score =  196 bits (499), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 80/271 (29%), Positives = 129/271 (47%), Gaps = 11/271 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +  +NVN +R+R+H L A I +  PD+I LQETK  D+ FP   ++++ YH+E  GQK
Sbjct: 1   MKLICFNVNGLRSRLHQLQAVIDKYQPDVIGLQETKVHDEAFPLTDVEAMGYHVEIHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-TQTLRIGNLYLPHGNPITST 122
            + GV ++SK     +      D+ D Q R I   +  +   T+R+ N Y P G  +   
Sbjct: 61  GHYGVCLISKKPLTNVQKGYLTDEEDAQRRMIMGDYETDSGNTVRVMNGYFPQGESVDHE 120

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175
            K+  K  +         +    ++ ++  GD NI P+              +    A F
Sbjct: 121 VKFPAKRKFYADLQAHLEEHCSADQNIVVMGDLNISPEDKDIGIGEPNRKRWLKTGKASF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHL-YSFWDYYADSWSKN--KGIRIDHIMLSPEA 232
             E R+ + KL   G TD+ R  +      +S++DY +  +     +G+RID I+L+   
Sbjct: 181 QPEEREWYAKLTGWGLTDSFRHLNPDEDQVFSWFDYRSRGFEAEPRRGLRIDGILLTAPL 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                 A +D + RG  KPSDH P+   LDI
Sbjct: 241 LEKCADAGVDYELRGMEKPSDHAPIWTELDI 271


>gi|113460979|ref|YP_719046.1| exonuclease III [Haemophilus somnus 129PT]
 gi|112823022|gb|ABI25111.1| Exodeoxyribonuclease III [Haemophilus somnus 129PT]
          Length = 267

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 80/267 (29%), Positives = 123/267 (46%), Gaps = 8/267 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L   +++  PD+I LQE K  D++FP+  ++ L YHI   GQK
Sbjct: 1   MKFISFNINGLRARPHQLDRIVEKYQPDVIGLQEIKVSDEDFPYHLVEHLGYHIYHHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122
            + GVA+L K +P  I      DD + Q R I A    +   L + N Y P G      T
Sbjct: 61  GHYGVALLLKQEPKVIRRGFSTDDENAQKRIIMADLETDFGLLTVINGYFPQGENRQHET 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  +      +  Q  +   P++  GD NI P         +     +      F 
Sbjct: 121 KFPAKEKFYADLQHYVEQEHDRNNPILIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+   +L N G  D  R  + T +  +S++DY +  +  N+G+RIDHI+++      
Sbjct: 181 PEEREWINRLYNYGLIDTFRHKNPTINDQFSWFDYRSKGFDDNRGLRIDHILVNQLLLER 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262
              A I    R   KPSDH P+     
Sbjct: 241 CVDAGIAFDIRAMEKPSDHAPIWAEFK 267


>gi|52307155|gb|AAU37655.1| XthA protein [Mannheimia succiniciproducens MBEL55E]
          Length = 275

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 82/269 (30%), Positives = 123/269 (45%), Gaps = 8/269 (2%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + + ++N+N +RAR H L   +++  PDII LQE K  D+ FP E +  L YH+   G
Sbjct: 7   NNMKIISFNINGLRARPHQLDKIVEQYQPDIIGLQEIKVADEMFPHELVDHLGYHVYHHG 66

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           QK + GVA+L K  P  +      D  D Q R I A F      L + N Y P G     
Sbjct: 67  QKGHYGVALLCKQAPKAVHKGFSTDTEDAQKRLIMADFETAFGALTVVNGYFPQGESRDH 126

Query: 122 -TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDAC 174
            TK+  K  +    L +       E  +I  GD NI P         D     +      
Sbjct: 127 ETKFPAKEKFYADLLNYVKNEHNPESNIIIMGDMNISPTDLDIGIGEDSRKRWLRTGKCS 186

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
           F  E R+ +Q+L   G  D  R  +  T+  +S++DY +  +++N+G+RIDHI+ + +  
Sbjct: 187 FLPEEREWYQRLYECGLEDTFRKLNPWTNDKFSWFDYRSKGFAENRGLRIDHILANSKLA 246

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
                  I    R   KPSDH P+  +  
Sbjct: 247 ERCVDTGIALDIRAMEKPSDHAPIWATFK 275


>gi|5545327|dbj|BAA82542.1| DNase [Actinobacillus actinomycetemcomitans]
          Length = 278

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 79/267 (29%), Positives = 122/267 (45%), Gaps = 8/267 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +RAR H L   I +  PD++ LQE K  D+ FP++ +  L YH+   GQK
Sbjct: 12  MKIMSFNINGLRARPHQLEEIINKYQPDVLGLQEIKVADEVFPYDLVDHLGYHVNHFGQK 71

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122
            + GVA+LSK  P+ +    P DD + Q R I          L + N Y P G       
Sbjct: 72  GHYGVALLSKQAPLSVRKGFPTDDEEAQKRIIMIDLETKFGQLTVINGYFPQGESREHPT 131

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP------QPHDCYNPIIWENDACFT 176
           K+  K  +     R+  Q    + P+I  GD NI P         +     +      F 
Sbjct: 132 KFPAKQKFYADLQRYLEQDHNAQNPVIIMGDMNISPSNLDIGIGEENRKRWLRTGKCSFL 191

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+ +Q+L   G  D  R  + T +  +S++DY +  +  N+G+RIDHI+ +    + 
Sbjct: 192 PEEREWYQRLYAYGLEDTFRHMNPTVNDKFSWFDYRSKGFDDNRGLRIDHILANKALVAH 251

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262
                I    R   KPSDH P+     
Sbjct: 252 CVDTGIALDIRAMNKPSDHAPIWAEFK 278


>gi|237737412|ref|ZP_04567893.1| exodeoxyribonuclease III [Fusobacterium mortiferum ATCC 9817]
 gi|229421274|gb|EEO36321.1| exodeoxyribonuclease III [Fusobacterium mortiferum ATCC 9817]
          Length = 251

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 70/262 (26%), Positives = 117/262 (44%), Gaps = 13/262 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      + KE   DI CLQETK ++     E L   + +     +
Sbjct: 1   MKLISWNVNGLRACVGKGFLDYFKEQQADIFCLQETKLQEGQIELE-LDGYHQYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +PI +   +  ++ D + R I   F                   +   
Sbjct: 60  KGYSGTAIFTKEKPISVHYGIGIEEHDKEGRVITLEFEKFYMITVYTPNSQEKLARLDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +   +     L+ ++P+I  GD N+  +  D  NP     +A F+ E R+ 
Sbjct: 120 M------KWEEDFKNYLLELDKKKPVIVCGDLNVAHKEIDLKNPKTNRKNAGFSDEEREK 173

Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             KL   GF D+ R  +     +YS+W Y   + +KN G RID+ ++S      +  A I
Sbjct: 174 MTKLLESGFVDSFRYFYPNKTDIYSWWSYRFSARAKNAGWRIDYFLVSDRIKENMKGAEI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
            T+  G    SDH PV++++D+
Sbjct: 234 HTEILG----SDHCPVLLNIDL 251


>gi|305666072|ref|YP_003862359.1| exodeoxyribonuclease [Maribacter sp. HTCC2170]
 gi|88707506|gb|EAQ99749.1| exodeoxyribonuclease [Maribacter sp. HTCC2170]
          Length = 253

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 79/262 (30%), Positives = 127/262 (48%), Gaps = 14/262 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY---HIET 59
           + + ++NVN IRA I      W+K  +PD+ICLQE K   +       +   Y   +  +
Sbjct: 1   MKIVSYNVNGIRAAINKGFLDWLKATDPDVICLQEIKAMKEQLDLSLFEEAGYANNYWYS 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GVAILSK QP  +      D +D + R + A F      + I +LYLP G   
Sbjct: 61  AQKKGYSGVAILSKKQPDHVEYGTGIDYMDFEGRNLRADFDG----VSIMSLYLPSG--T 114

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              + + K+ ++  F R+     +    LI  GDYNI  +  D ++P+  +  + F    
Sbjct: 115 NMDRLEFKLKYMAEFQRYVDDLRKAHPNLIILGDYNICHEAIDIHDPVRNKKVSGFLPVE 174

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R+        GF D+ R  +   H Y++W Y A++ + NKG R+D+ M+S    + L  +
Sbjct: 175 REWIGSFIESGFIDSFRHLNKEPHNYTWWSYRANARNNNKGWRLDYGMVSEPLENRLKRS 234

Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261
            I +  R     SDH P++V L
Sbjct: 235 VILSDAR----HSDHCPILVEL 252


>gi|91792822|ref|YP_562473.1| exonuclease III [Shewanella denitrificans OS217]
 gi|91714824|gb|ABE54750.1| Exodeoxyribonuclease III [Shewanella denitrificans OS217]
          Length = 269

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 85/269 (31%), Positives = 133/269 (49%), Gaps = 9/269 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +RAR+H L A I  + PDII LQETK  D+ FP   ++++ Y +   G K
Sbjct: 1   MKIISFNINGLRARLHQLQALIDSHQPDIIGLQETKVHDEAFPVADVEAMGYKVHYHGGK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLD-VQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121
           ++ GVA+LSK +PIE+      D+ D  +   I      N + L + N Y P G+ I   
Sbjct: 61  AHYGVAMLSKLEPIEVQKGFSTDEEDAQRRLIIGKFNQANGRVLTVINGYFPQGDSIHHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175
           TKY  K  + +  +         +E +   GD NI PQ  D           +      F
Sbjct: 121 TKYPAKRKFYQDLMAHLDANHSPDEDIAIIGDINISPQDLDIGIGEVNAKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R+    L + GF D+ R  H      YS++DY +  +  N+G+RID I+++   T+
Sbjct: 181 QPEEREWLACLLDWGFIDSFRLLHPTREQRYSWFDYRSKGFDDNRGLRIDVILITASMTA 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            L  + +D   RG  KPSDH P+  +  +
Sbjct: 241 NLVESDVDYDLRGIEKPSDHAPIWSTFSV 269


>gi|86135128|ref|ZP_01053710.1| exodeoxyribonuclease III (Xth) [Polaribacter sp. MED152]
 gi|85821991|gb|EAQ43138.1| exodeoxyribonuclease III (Xth) [Polaribacter sp. MED152]
          Length = 253

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 78/264 (29%), Positives = 124/264 (46%), Gaps = 15/264 (5%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY---HIET 59
           + + ++NVN IRA +    + W+K  NPD+IC+QETK   +       +   Y   +  +
Sbjct: 1   MKIISYNVNGIRAALKKGFSDWLKAANPDVICIQETKAHKEQLDLSLFEDAGYPYHYWFS 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+ VAIL K +P  I      + +D + R +   F      + I +LYLP G   
Sbjct: 61  AQKKGYSSVAILCKEKPNHIEYGTGIESMDFEGRNLRVDFD----DVSIMSLYLPSGTNA 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                D K +++  F  + +   +    L+  GDYNI  +  D +NP   +  + F  E 
Sbjct: 117 LR--LDYKFNYMDEFQEYITNLRKEIPNLVICGDYNICHEEIDIHNPK-MKGVSGFLPEE 173

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R       N GF D+ R  +     YS+W Y A++ + NKG R+D+ M+S      +  A
Sbjct: 174 RTWIGNFINSGFIDSFRYLNKELQQYSWWSYRANARANNKGWRLDYAMVSEPLKDKISRA 233

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
            I  +     K SDH P+ + LDI
Sbjct: 234 YILPEA----KHSDHCPIALELDI 253


>gi|225012120|ref|ZP_03702557.1| exodeoxyribonuclease III Xth [Flavobacteria bacterium MS024-2A]
 gi|225003675|gb|EEG41648.1| exodeoxyribonuclease III Xth [Flavobacteria bacterium MS024-2A]
          Length = 257

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 81/262 (30%), Positives = 127/262 (48%), Gaps = 13/262 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC-- 60
           + + ++NVN IRA +    A+W+     D+IC+QE K  ++      L++L YH      
Sbjct: 5   LKILSYNVNGIRAALNKGFASWLDSTAADVICIQEIKALEEQVDTAALEALGYHHFWFSA 64

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GVAI SK +P  +      + +D + R I A F      + I +LYLP G  I 
Sbjct: 65  QKKGYSGVAIFSKIKPTNVTFGCGIEHMDFEGRIIRADFD----KVSIMSLYLPSGTNID 120

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
               + K  ++  F  +     +    LI  GDYNI     D ++P+  +N + F  E R
Sbjct: 121 R--LEYKFKFMAEFQEYIDLLKKEFPNLIICGDYNICHHAIDIHDPVRNKNVSGFLPEER 178

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           +        GF D+ R  +   H YS+W Y A++ + NKG RID+ ++S      ++ A 
Sbjct: 179 KWLDGFITSGFIDSFRYLNPEPHHYSWWSYRANARNNNKGWRIDYALVSESLKDNINRAY 238

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I  +     K SDH PV V L+
Sbjct: 239 ILPEA----KHSDHCPVGVELN 256


>gi|152987919|ref|YP_001346307.1| exodeoxyribonuclease III [Pseudomonas aeruginosa PA7]
 gi|150963077|gb|ABR85102.1| exodeoxyribonuclease III [Pseudomonas aeruginosa PA7]
          Length = 261

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 102/262 (38%), Positives = 153/262 (58%), Gaps = 5/262 (1%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           M  + +AT+NVN I+ R+  L AW++   PDI+CLQE KT D  FP   L+   Y     
Sbjct: 1   MGTLKIATFNVNGIQTRLAALLAWLEREAPDIVCLQELKTPDARFPAAALEKAGYGAIWQ 60

Query: 61  GQKSYNGVAILSKY-QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
           GQ ++NGVAIL++  QP+E+   LPG+  D  +R++EA        L + +LYLP+GNP 
Sbjct: 61  GQSAWNGVAILARDSQPLEVRRGLPGNASDPHSRYLEAAVDG----LLVASLYLPNGNPQ 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K+D K++W +  +R A++ ++   P++ AGD+N++P   D Y+   W+ DA    E 
Sbjct: 117 PGPKFDYKLAWFEHLIRHAAELMKSGHPVVLAGDFNVVPSNFDIYDTRSWKKDALLQPES 176

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R+ F++L   G+ DA+R       LY+FWDY+   W ++ G+RIDH++LS      L  A
Sbjct: 177 RECFERLLRQGWVDALRQRFPDRRLYTFWDYFRQHWQRDAGLRIDHLLLSASLADHLEDA 236

Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261
            +D   RG    SDH P  VSL
Sbjct: 237 GVDRWVRGEEHASDHAPAWVSL 258


>gi|73670688|ref|YP_306703.1| DNA-(apurinic or apyrimidinic site) lyase [Methanosarcina barkeri
           str. Fusaro]
 gi|72397850|gb|AAZ72123.1| DNA-(apurinic or apyrimidinic site) lyase [Methanosarcina barkeri
           str. Fusaro]
          Length = 258

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 70/260 (26%), Positives = 119/260 (45%), Gaps = 12/260 (4%)

Query: 6   VATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETCGQ 62
           + +WNVN +RA +       + E   DI+C+QETK      P E      Y+    +  +
Sbjct: 7   LISWNVNGLRAVMKKGFLELLLEQKFDIVCIQETKVSPDKLPREAKNIPGYYNYFVSAEK 66

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
             Y+GV + SK +P+++ T +  +  D + RF+ A F        + N+Y P+G   +  
Sbjct: 67  NGYSGVGLFSKKKPLKLETGMGIEKFDKEGRFLRADFE----DFTLMNIYFPNGK-ASLE 121

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           + + K+S+ + FL +A+      + L+  GD N   +  D   P   E  + F  E R  
Sbjct: 122 RLEYKMSFYEAFLDYANSLKAEGKRLVICGDVNTAHKELDLARPKQNETISGFLPEERAW 181

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
             K    G+ D  R  +     YS+W     +  +N G R+D+  +S +    + SA I 
Sbjct: 182 MDKFLAAGYLDTFRMFNPEGGNYSWWSMRTGARKRNVGWRLDYFFVSEKLRDNVKSAPIY 241

Query: 243 TKPRGWTKPSDHTPVIVSLD 262
           ++  G    SDH PV + L+
Sbjct: 242 SEIMG----SDHCPVGLELE 257


>gi|309782573|ref|ZP_07677296.1| exodeoxyribonuclease III [Ralstonia sp. 5_7_47FAA]
 gi|308918664|gb|EFP64338.1| exodeoxyribonuclease III [Ralstonia sp. 5_7_47FAA]
          Length = 269

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 95/266 (35%), Positives = 145/266 (54%), Gaps = 8/266 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPD-----IICLQETKTEDKNFPFETLQSLNYHIE 58
           + VATWNVNS++ R+ ++  W+ E   D     ++CLQE K  D  +P   L +  Y   
Sbjct: 1   MRVATWNVNSLKVRLPHVLQWLAEREADATPIDLLCLQELKLPDDRYPLAELDAAGYASL 60

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDL---DVQARFIEATFTINTQTLRIGNLYLPH 115
             GQK+YNGVAILS+   +     +  +     D Q R + AT+ ++   +R+ + Y+P+
Sbjct: 61  FTGQKTYNGVAILSRKASVPEGRDVVKNIPGFTDDQQRIVAATYDVDGGPVRVISAYIPN 120

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
           G  + S K+  K+ W++    + +  +     L+  GD+NI P+  D ++P  WE     
Sbjct: 121 GQALDSDKFVYKLRWLEALQAWLASEMAANPRLMLLGDFNIAPEDRDVHDPKKWEGQNLV 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
           + E R +F+ +Q  G  DA R       L+S+WDY    + +N G+RIDHIMLSPE   L
Sbjct: 181 SPEERAAFRAMQAAGLVDAFRMFEQEDKLFSWWDYRMFGFKRNAGLRIDHIMLSPELAKL 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
             S  ID  PR W +PSDHTPV+ +L
Sbjct: 241 CESCHIDRVPRTWEQPSDHTPVVAAL 266


>gi|182626631|ref|ZP_02954375.1| exodeoxyribonuclease III [Clostridium perfringens D str. JGS1721]
 gi|177908025|gb|EDT70604.1| exodeoxyribonuclease III [Clostridium perfringens D str. JGS1721]
          Length = 250

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 66/256 (25%), Positives = 108/256 (42%), Gaps = 13/256 (5%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      + K  + DI CLQETK ++     + L+  + +     +
Sbjct: 1   MKLISWNVNGLRACVKKGFLDYFKSEDADIFCLQETKLQEGQIDLD-LEGYHQYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +P+ +   +  +  D + R I   F                   +   
Sbjct: 60  KGYSGTAIFTKKEPLNVYYGINMEHHDKEGRVITLEFEDFFMVTVYTPNSQSELARLEYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +   R     L  ++ ++  GD N+  +  D  NP     +A FT E R  
Sbjct: 120 M------EWEDDFRNYLLELSSKKGVVVCGDLNVAHKEIDLKNPKTNRKNAGFTDEERDK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F  L + GF D  R  +     +YS+W Y  ++   N G RID+ ++S      +  A I
Sbjct: 174 FSTLLSSGFIDTFRYFNPDLEGVYSWWSYRFNARKNNAGWRIDYFLVSNNLEDRIKEASI 233

Query: 242 DTKPRGWTKPSDHTPV 257
           DT+  G    SDH PV
Sbjct: 234 DTEILG----SDHCPV 245


>gi|207742979|ref|YP_002259371.1| exodeoxyribonuclease III protein [Ralstonia solanacearum IPO1609]
 gi|206594376|emb|CAQ61303.1| exodeoxyribonuclease III protein [Ralstonia solanacearum IPO1609]
          Length = 269

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 92/266 (34%), Positives = 141/266 (53%), Gaps = 8/266 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPD-----IICLQETKTEDKNFPFETLQSLNYHIE 58
           + VATWNVNS++ R+ ++  W+ E   D     ++CLQE K  D  +P   L +  Y   
Sbjct: 1   MRVATWNVNSLKVRLPHVLQWLGEREADATPIDLLCLQELKLPDDRYPLAELDAAGYASL 60

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDV---QARFIEATFTINTQTLRIGNLYLPH 115
             GQK+YNGVAIL++   +     +  +       Q R + AT+ +    +R+ + Y P+
Sbjct: 61  FTGQKTYNGVAILARKAAMPEGRDVIKNIPGFADEQQRIVAATYDVAGGPVRVISAYFPN 120

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
           G  + S K   K+ W+     +    ++    L+  GD+NI P   D ++P  WE     
Sbjct: 121 GQALDSDKMVYKMRWLAALQDWLKTEMDAHPRLMLLGDFNIAPDDRDVHDPKKWEGMNLV 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
           + E R +F+ L++ G  DA R       L+S+WDY   ++ +N G+RIDHI+LSPE    
Sbjct: 181 SPEERAAFRALESAGLVDAFRMFEQADKLFSWWDYRLFAFKRNAGLRIDHILLSPELAQR 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
             S  ID  PRGW +PSDHTPV+ +L
Sbjct: 241 CESCHIDRVPRGWEQPSDHTPVVAAL 266


>gi|294806497|ref|ZP_06765338.1| exodeoxyribonuclease III [Bacteroides xylanisolvens SD CC 1b]
 gi|294446360|gb|EFG14986.1| exodeoxyribonuclease III [Bacteroides xylanisolvens SD CC 1b]
          Length = 253

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 81/261 (31%), Positives = 136/261 (52%), Gaps = 12/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60
           + + T+NVN +RA +   L  W+ + NPDI+CLQETK +   +P E  ++L Y  ++ + 
Sbjct: 1   MKIITYNVNGLRAAVSKGLPEWLAQENPDILCLQETKLQPDQYPGEVFEALGYKSYLYSA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GVAIL+K +P  +   +  +  D + RFI A F      L + ++Y P G    
Sbjct: 61  QKKGYSGVAILTKREPDHVEYGMGMEAYDNEGRFIRADFG----DLSVVSVYHPSG-TSG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   K+ W++ F ++  +  +    LI  GDYNI  +P D ++P+    ++ F  E R
Sbjct: 116 DERQAFKMVWLEDFQKYVMELQKSRPNLILCGDYNICHEPIDIHDPVRNATNSGFLPEER 175

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           +   +  + G+ D+ R        Y++W Y  +S +KNKG RID+ M+S     LL  A 
Sbjct: 176 EWMTRFLSAGYVDSFRTLCPEKQEYTWWSYRFNSRAKNKGWRIDYCMVSEPVRPLLKRAY 235

Query: 241 IDTKPRGWTKPSDHTPVIVSL 261
           I  +       SDH P+ + +
Sbjct: 236 ILNEA----VHSDHCPMALEI 252


>gi|289435119|ref|YP_003464991.1| exodeoxyribonuclease III [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289171363|emb|CBH27905.1| exodeoxyribonuclease III [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
          Length = 251

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 65/262 (24%), Positives = 111/262 (42%), Gaps = 13/262 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      +    + DI CLQETK +      + L +   +     +
Sbjct: 1   MKLISWNVNGLRAAVKKGFLEYFDSVDADIFCLQETKLQAGQIDLD-LPAYKDYWNYAVK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +P+ +   L  ++ D + R I   F                   +   
Sbjct: 60  KGYSGTAIFTKKEPLSVQYGLGIEEHDTEGRVITLEFEKFFMVTVYTPNSQAELKRLDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +  +    ++L+  +P++  GD N+  +  D  NP     +A F+ E R  
Sbjct: 120 M------TFEDAILAYVKKLDETKPVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F      GF D+ R  +      YS+W Y  ++ ++N G RID+ ++S      L  A+I
Sbjct: 174 FTAFLEAGFVDSFRYFYPDLEDAYSWWSYRMNARARNIGWRIDYFVVSERLKDNLVDAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
                G    SDH PV + L+I
Sbjct: 234 HPDVLG----SDHCPVELELNI 251


>gi|227834100|ref|YP_002835807.1| exodeoxyribonuclease III [Corynebacterium aurimucosum ATCC 700975]
 gi|262183414|ref|ZP_06042835.1| exodeoxyribonuclease III [Corynebacterium aurimucosum ATCC 700975]
 gi|227455116|gb|ACP33869.1| exodeoxyribonuclease III [Corynebacterium aurimucosum ATCC 700975]
          Length = 269

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 83/267 (31%), Positives = 136/267 (50%), Gaps = 8/267 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+NS+R R       + +++ D++CLQETK  D  FP E  + + YH+   G  
Sbjct: 1   MRIATWNINSVRTRAQRAVDLLAKHDIDVLCLQETKVADAKFPREPFEEVGYHVTCHGLN 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT-----INTQTLRIGNLYLPHGNP 118
            +NGVAILSK +P E+ T  PG     +    E            + + I +LY+P+G  
Sbjct: 61  QWNGVAILSKEEPEEVQTFFPGQPGFHKDPAKEQAREARAVSARVRGIEIWSLYVPNGRE 120

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
           IT   +D K+ ++    R+A  R + +  L+  GD+NI P   D ++   +      T  
Sbjct: 121 ITDRHFDYKLDFLYSLARYAENRTQSK--LLLTGDFNIAPWDEDVWDMSPFRGKTHVTEP 178

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
            R +FQ L+  G  +  R   +    ++++DY +  + KN+G+RID  + S     L+  
Sbjct: 179 ERAAFQMLEEAGLVEVTRRFTE-EDRWTYFDYKSLRFQKNEGMRIDFQLASEPLARLVEG 237

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           A++D   R   K SDH P+I   D+P+
Sbjct: 238 AQVDMVERAGDKTSDHVPLIADFDVPD 264


>gi|77458095|ref|YP_347600.1| exodeoxyribonuclease III [Pseudomonas fluorescens Pf0-1]
 gi|77382098|gb|ABA73611.1| putative exodeoxyribonuclease [Pseudomonas fluorescens Pf0-1]
          Length = 264

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 105/262 (40%), Positives = 155/262 (59%), Gaps = 5/262 (1%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           M  + +AT+NVN +RAR+ NL  W++   PDI+CLQE K  D  FP   L++  Y     
Sbjct: 1   MKKMRIATFNVNGLRARLPNLLEWLRREQPDIVCLQELKMLDSAFPAADLEAAGYGAIWH 60

Query: 61  GQKSYNGVAILSKY-QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
           GQ S+NGVAIL++  QP+E    LPGD  D  +R++EA        + +G LYLP+GNP 
Sbjct: 61  GQASWNGVAILARDAQPLESRRGLPGDPDDKHSRYLEAAV----HGVLVGCLYLPNGNPQ 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K+D K++W +R +++A      + P++ AGDYN++P   D YN   W  DA    E 
Sbjct: 117 PGPKFDYKLAWFERLIKYARDLQSSDHPVVLAGDYNVVPTDLDIYNTRSWLKDALLQPES 176

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R+ +Q+L + G+TD++R  +    LY+FWDY+   W KN G+RIDH++L+P  +  LH A
Sbjct: 177 RECYQRLLDQGWTDSLRHLYPEDRLYTFWDYFRQHWQKNSGLRIDHLLLNPTLSPYLHEA 236

Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261
            +D   R     SDH P  + +
Sbjct: 237 GVDAWVRNEPHASDHAPTWIRI 258


>gi|319899105|ref|YP_004159198.1| exodeoxyribonuclease III [Bartonella clarridgeiae 73]
 gi|319403069|emb|CBI76624.1| exodeoxyribonuclease III [Bartonella clarridgeiae 73]
          Length = 260

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 141/259 (54%), Positives = 180/259 (69%), Gaps = 1/259 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+  I+AR   L  W+K+N PDI+CLQE K+ D+NFP +T++SL YHIET GQK
Sbjct: 1   MKIATWNIAGIKARHETLCKWLKQNQPDIVCLQEIKSVDENFPRDTIESLGYHIETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           S+NGVAILSK  P EI+  LPGD+ D QAR+IE  ++ N  ++R+ +LYLP+GNPI S K
Sbjct: 61  SFNGVAILSKKVPDEIIRRLPGDNNDKQARYIETVYSTNKGSIRVASLYLPNGNPINSEK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W+KRF   A   L  EEPLI AGDYN+IP P D  NP  W NDA F  ++RQ F
Sbjct: 121 YLYKMEWMKRFYTHAKSLLAYEEPLILAGDYNVIPTPLDAKNPQEWSNDALFLPQIRQIF 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q + ++GF DAIR   DT   +SFWD+ A +W KN GIRIDH++LSPEA   L  A   T
Sbjct: 181 QCIVHLGFYDAIRCVTDTP-SFSFWDFQAGAWKKNNGIRIDHLLLSPEAADQLICAYSQT 239

Query: 244 KPRGWTKPSDHTPVIVSLD 262
           + RG  KPSDH P+ V L+
Sbjct: 240 EMRGHQKPSDHIPIWVQLN 258


>gi|302534940|ref|ZP_07287282.1| exodeoxyribonuclease III [Streptomyces sp. C]
 gi|302443835|gb|EFL15651.1| exodeoxyribonuclease III [Streptomyces sp. C]
          Length = 267

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 62/266 (23%), Positives = 103/266 (38%), Gaps = 6/266 (2%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IET 59
           ++TV + NVN IRA        W+  ++ D++CLQE + E+   P E  +   +H     
Sbjct: 1   MLTVTSVNVNGIRAAAKKGFVEWLAGSDADVVCLQEVRAEEAQIPAEAREPEGWHTVFAP 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
              K   GVA+ ++ +P  +      D+ D   R+IE      T    +       G   
Sbjct: 61  AAVKGRAGVALYTRREPERVRVGFGSDEFDASGRYIEVDLPGVTVA-SLYLPSGEAGTAK 119

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              KY     ++       ++       ++  GD+NI  Q  D  N      +A F  E 
Sbjct: 120 QDEKYRFMEEFLGYLGELKARAAADGREVVVCGDWNICHQEADLKNWKTNRKNAGFLPEE 179

Query: 180 RQS--FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
           R+       +            DT   YS+W Y   ++  + G RID  + SP   +   
Sbjct: 180 REWLGKVYAEAGYVDVVRGLHPDTEGPYSWWSYRGRAFDNDAGWRIDLQVASPGLAAKAV 239

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263
            A ++       + SDH PV V  ++
Sbjct: 240 KAFVERAETHPERWSDHAPVTVVYEL 265


>gi|225420139|ref|ZP_03762442.1| hypothetical protein CLOSTASPAR_06482 [Clostridium asparagiforme
           DSM 15981]
 gi|225041196|gb|EEG51442.1| hypothetical protein CLOSTASPAR_06482 [Clostridium asparagiforme
           DSM 15981]
          Length = 251

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 77/260 (29%), Positives = 121/260 (46%), Gaps = 13/260 (5%)

Query: 5   TVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
            + +WNVN +RA +      + KE + D+ CLQETK ++     + L   + +     +K
Sbjct: 3   KLISWNVNGLRACVGKGFLDYFKEADADVFCLQETKLQEGQIDLD-LPGYHQYWNYAQKK 61

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            Y+G A+ +K +P+ +   L  ++ D++ R I A F                 +     +
Sbjct: 62  GYSGTAMFTKEEPVSVRYGLGIEEHDMEGRVIAAEFQE-----YFVVTCYTPNSQDGLAR 116

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
            D ++ W   FL +  + LE E+P+IF GD N+  +  D  NP     +A FT E R  F
Sbjct: 117 LDYRMEWENAFLAYLKK-LEEEKPVIFCGDLNVAHKEIDLKNPKSNRKNAGFTDEERGKF 175

Query: 184 QKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
             L   GF D  R  +     +YS+W Y   + +KN G RID+   S      L SA I 
Sbjct: 176 TDLLGAGFIDTFRYFYPDREGIYSWWSYRFSARAKNAGWRIDYFCASESLKDRLVSADIH 235

Query: 243 TKPRGWTKPSDHTPVIVSLD 262
           T+  G    SDH PV + ++
Sbjct: 236 TEVMG----SDHCPVELVIE 251


>gi|168205412|ref|ZP_02631417.1| exodeoxyribonuclease III [Clostridium perfringens E str. JGS1987]
 gi|170663003|gb|EDT15686.1| exodeoxyribonuclease III [Clostridium perfringens E str. JGS1987]
          Length = 250

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 66/256 (25%), Positives = 108/256 (42%), Gaps = 13/256 (5%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      + K  + DI CLQETK ++     + L+  + +     +
Sbjct: 1   MKLISWNVNGLRACVKKGFLDYFKSEDADIFCLQETKLQEGQIDLD-LEGYHQYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +P+ +   +  +  D + R I   F                   +   
Sbjct: 60  KGYSGTAIFTKKEPLNVYYGINMEHHDKEGRVITLEFEDFFMVTVYTPNSQSELARLEYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +   R     L  ++ ++  GD N+  +  D  NP     +A FT E R  
Sbjct: 120 M------EWEDDFRNYLLELSSKKGVVVCGDLNVAHKEIDLKNPKTNRKNAGFTDEERDK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F  L + GF D  R  +     +YS+W Y  ++   N G RID+ ++S      +  A I
Sbjct: 174 FSTLLSSGFIDTFRYFNPDLEGIYSWWSYRFNARKNNAGWRIDYFLVSNNLEDRIKEAFI 233

Query: 242 DTKPRGWTKPSDHTPV 257
           DT+  G    SDH PV
Sbjct: 234 DTEILG----SDHCPV 245


>gi|18310156|ref|NP_562090.1| exodeoxyribonuclease III [Clostridium perfringens str. 13]
 gi|110802988|ref|YP_698514.1| exodeoxyribonuclease III [Clostridium perfringens SM101]
 gi|18144835|dbj|BAB80880.1| 3'-exo-deoxyribonuclease [Clostridium perfringens str. 13]
 gi|110683489|gb|ABG86859.1| exodeoxyribonuclease III [Clostridium perfringens SM101]
          Length = 250

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 66/256 (25%), Positives = 108/256 (42%), Gaps = 13/256 (5%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      + K  + DI CLQETK ++     + L+  + +     +
Sbjct: 1   MKLISWNVNGLRACVKKGFLDYFKSEDADIFCLQETKLQEGQIDLD-LEGYHQYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +P+ +   +  +  D + R I   F                   +   
Sbjct: 60  KGYSGTAIFTKKEPLNVYYGINMEHHDKEGRVITLEFEDFFMVTVYTPNSQSELARLEYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +   R     L  ++ ++  GD N+  +  D  NP     +A FT E R  
Sbjct: 120 M------EWEDDFRNYLLELSSKKGVVVCGDLNVAHKEIDLKNPKTNRKNAGFTDEERDK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F  L + GF D  R  +     +YS+W Y  ++   N G RID+ ++S      +  A I
Sbjct: 174 FSTLLSSGFIDTFRYFNPDLEGIYSWWSYRFNARKNNAGWRIDYFLVSNNLEDRIKEASI 233

Query: 242 DTKPRGWTKPSDHTPV 257
           DT+  G    SDH PV
Sbjct: 234 DTEILG----SDHCPV 245


>gi|258543182|ref|YP_003188615.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-01]
 gi|256634260|dbj|BAI00236.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-01]
 gi|256637320|dbj|BAI03289.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-03]
 gi|256640372|dbj|BAI06334.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-07]
 gi|256643429|dbj|BAI09384.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-22]
 gi|256646484|dbj|BAI12432.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-26]
 gi|256649537|dbj|BAI15478.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-32]
 gi|256652523|dbj|BAI18457.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256655581|dbj|BAI21508.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-12]
          Length = 261

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 97/259 (37%), Positives = 134/259 (51%), Gaps = 5/259 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + ++TWNVNS+R R+  +  W+K   PD++ +QE K E   FP    +   Y     GQK
Sbjct: 1   MKLSTWNVNSVRQRLDLVLDWLKREQPDVLMMQEIKCETDQFPKAAFEDAGYGCAGVGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           SYNGVA L +         LPG               +NTQ + +GNLYLP+GN      
Sbjct: 61  SYNGVATLVRGDFSVTTDRLPGFSDPAARYV-----EVNTQGVVLGNLYLPNGNSGGEQG 115

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ ++      A   L  E     AGDYNI P P DC    +   DA    + R ++
Sbjct: 116 YATKLEFLSALTGRARLLLAEETDFALAGDYNICPAPIDCAPGALGPEDALVRPQSRAAY 175

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           ++L  +G TDA+RA H T   Y+FWDY A +W ++ G+RIDH++LSP     L +A  D 
Sbjct: 176 RRLLWLGLTDALRALHPTGAAYTFWDYQARAWERDCGLRIDHMLLSPRLAERLQTAEPDR 235

Query: 244 KPRGWTKPSDHTPVIVSLD 262
             R   +PSDH P IV+L 
Sbjct: 236 NERAMPRPSDHVPFIVTLK 254


>gi|225631175|ref|ZP_03787879.1| exodeoxyribonuclease III [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
 gi|225591132|gb|EEH12310.1| exodeoxyribonuclease III [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
          Length = 259

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 91/260 (35%), Positives = 149/260 (57%), Gaps = 1/260 (0%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           ++ +ATWNVNSIR R++ L ++I ++  DII LQE K  ++ FP+  ++ L Y     GQ
Sbjct: 1   MLKIATWNVNSIRKRVNQLCSFIVDSQIDIILLQEIKCMEEQFPYAEIEKLGYECAVYGQ 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
            + NGV +LSKY  +E    +   +   +AR+IE     N Q +R+G++Y+P+G    S 
Sbjct: 61  VARNGVCVLSKYPILEKFK-IDIVEGYQEARYIECIIKHNNQKVRVGSVYVPNGQSPDSQ 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
            ++ K+ +        S  L+ EE  I AGDYN+ P   D ++  +     CF +  R+ 
Sbjct: 120 AFEYKLKFFDNLYERMSTLLKNEELTIIAGDYNVAPDEIDVFDSNLLNGQVCFHIREREK 179

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
            + + N+GF DA R +H     +++W Y  +S   N+G+RID+++LSP+A   L +  ID
Sbjct: 180 LRAILNLGFKDAFRISHPNLQQFTWWHYQGNSLRNNQGMRIDYMLLSPQAVDKLETCYID 239

Query: 243 TKPRGWTKPSDHTPVIVSLD 262
            + R    PSDHTPV+ +++
Sbjct: 240 DRLRKLENPSDHTPVVCAIE 259


>gi|22299328|ref|NP_682575.1| exodeoxyribonuclease III [Thermosynechococcus elongatus BP-1]
 gi|22295511|dbj|BAC09337.1| exodeoxyribonuclease III [Thermosynechococcus elongatus BP-1]
          Length = 280

 Score =  196 bits (498), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 83/260 (31%), Positives = 128/260 (49%), Gaps = 3/260 (1%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64
            +ATWNVNSIR R+ ++  W+     D +CLQETK  D  FP +      YH+   GQK+
Sbjct: 22  KIATWNVNSIRTRLDHVCQWLDSTGVDYLCLQETKVTDAEFPRQPFLDRGYHVYCSGQKA 81

Query: 65  YNGVAILSKYQPIEIVTHLPGDDLDVQ--ARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           YNGVAILS+     +                            + + N+Y+P+G    S 
Sbjct: 82  YNGVAILSRQPLAGVEAGFAPQLPSHSELDTQKRLIRAQFAPDVILVNVYIPNGGEYDSE 141

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           KY  K+ W+ + L    ++L  +  +I  GD+NI P+  D ++          T   R  
Sbjct: 142 KYHYKLHWL-KTLYVYLEQLTTQGEVILCGDFNIAPEDKDLFDASDRATKVGATDAERNL 200

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
              ++++GF DA R   +    YS+WDY + ++ +N G RIDH+ ++P   +   +  ID
Sbjct: 201 LAAIRDLGFHDAFRQFTEAPGHYSWWDYRSGAFRRNHGWRIDHLYVTPGVKARACNCHID 260

Query: 243 TKPRGWTKPSDHTPVIVSLD 262
             PR   KPSDH PVI+ ++
Sbjct: 261 IAPRRLPKPSDHAPVILEIE 280


>gi|72383653|ref|YP_293008.1| exodeoxyribonuclease III [Prochlorococcus marinus str. NATL2A]
 gi|72003503|gb|AAZ59305.1| Exodeoxyribonuclease III [Prochlorococcus marinus str. NATL2A]
          Length = 275

 Score =  196 bits (497), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 97/272 (35%), Positives = 143/272 (52%), Gaps = 4/272 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + VATWNVNSIR+RI ++  W+  N  DI+CLQETKTEDK FP E    L Y +   GQK
Sbjct: 1   MLVATWNVNSIRSRIDHVKEWLITNKIDILCLQETKTEDKFFPIEIFSDLGYEVSISGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT----INTQTLRIGNLYLPHGNPI 119
           SYNGVAI+S++   +I         D Q   I +        +   +RI N+Y+P+G+ I
Sbjct: 61  SYNGVAIISRFPINDIKIGFNEVTNDYQDLSILSEQKRIISADINDIRIINVYVPNGSSI 120

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
            S K+  K  W+K    +  +  +   P+   GD+NI P+  D + P  +E     + + 
Sbjct: 121 NSDKFIYKKKWLKCLQVYLREINKNNTPICLLGDFNIAPEDRDIHTPSRYEESIMASSKE 180

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R+  +        D  R        +S+WDY   +W ++KG RIDHI L+ +  S  +S 
Sbjct: 181 RELLKDALGGELEDVFRIFEPGEKNWSWWDYRHSAWERDKGWRIDHIYLTEDILSCANSC 240

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271
            ID + R   KPSDH PV+V ++ P    + +
Sbjct: 241 WIDKEQRSREKPSDHAPVVVDINWPPSDIENE 272


>gi|291561139|emb|CBL39938.1| exodeoxyribonuclease III [butyrate-producing bacterium SS3/4]
          Length = 284

 Score =  196 bits (497), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 76/263 (28%), Positives = 125/263 (47%), Gaps = 13/263 (4%)

Query: 1   MSVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           +S+  + +WNVN +RA +      ++KE++ DI C+QE+K ++     E L   + +   
Sbjct: 32  LSMKKMISWNVNGLRACLGKGFLEYLKESDADIFCIQESKLQEGQVDLE-LPGYHQYWNY 90

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G A+ +K +PI +   L  ++ D + R I A F                 +  
Sbjct: 91  AEKKGYSGTAMFTKEEPIAVTYGLGIEEHDHEGRVITAEFPE-----YYVVTCYTPNSQD 145

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              + D ++ W   F  +  + LE ++P+IF GD N+  Q  D  NP     +A F+ E 
Sbjct: 146 GLKRLDYRMQWEDAFRAYLKE-LETKKPVIFCGDLNVAHQEIDLKNPKTNRKNAGFSDEE 204

Query: 180 RQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R  F +L   GF D  R  +     +YS+W Y   + +KN G RID+  +S      L  
Sbjct: 205 RAKFTELLEAGFVDTFRYFYPDQEGIYSWWSYRFSARAKNAGWRIDYFCVSESLKDRLVD 264

Query: 239 ARIDTKPRGWTKPSDHTPVIVSL 261
           A+I T+  G    SDH PV + +
Sbjct: 265 AKIHTEVMG----SDHCPVELDI 283


>gi|319952714|ref|YP_004163981.1| exodeoxyribonuclease iii xth [Cellulophaga algicola DSM 14237]
 gi|319421374|gb|ADV48483.1| exodeoxyribonuclease III Xth [Cellulophaga algicola DSM 14237]
          Length = 253

 Score =  196 bits (497), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 77/262 (29%), Positives = 128/262 (48%), Gaps = 14/262 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY---HIET 59
           + + ++NVN IRA I      W+K  NPD++CLQE K  ++       +   Y   +  +
Sbjct: 1   MKIVSYNVNGIRAAINKGFIDWLKIVNPDVVCLQEIKAMEEQLDLSLFEEAGYSYNYWYS 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GVAILSK +P  +      D +D + R I A +      + + ++YLP G  I
Sbjct: 61  AQKKGYSGVAILSKTKPNHVEFGTGIDYMDFEGRNIRADYDG----VSVMSMYLPSGTNI 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
               +  K+ ++  F  + +        LI  GDYNI  +  D +NP+  +N + F    
Sbjct: 117 DRLSF--KLKYMAEFQEYVTDLKVEHPNLIILGDYNICHKAIDIHNPVGLKNTSGFLPVE 174

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R+      + GF D+ R  ++    Y++W Y A++ + NKG R+D+ ++S      L  A
Sbjct: 175 REWIGAFMDNGFIDSFRYFNEEPDKYTWWSYRANARNNNKGWRLDYALVSTPLKDRLKRA 234

Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261
            I  +     K SDH P++V L
Sbjct: 235 VILAEA----KHSDHCPILVEL 252


>gi|168209710|ref|ZP_02635335.1| exodeoxyribonuclease III [Clostridium perfringens B str. ATCC 3626]
 gi|168217871|ref|ZP_02643496.1| exodeoxyribonuclease III [Clostridium perfringens NCTC 8239]
 gi|170712212|gb|EDT24394.1| exodeoxyribonuclease III [Clostridium perfringens B str. ATCC 3626]
 gi|182380111|gb|EDT77590.1| exodeoxyribonuclease III [Clostridium perfringens NCTC 8239]
          Length = 250

 Score =  196 bits (497), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 66/256 (25%), Positives = 108/256 (42%), Gaps = 13/256 (5%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      + K  + DI CLQETK ++     + L+  + +     +
Sbjct: 1   MKLISWNVNGLRACVKKGFLDYFKSEDADIFCLQETKLQEGQIDLD-LEGYHQYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +P+ +   +  +  D + R I   F                   +   
Sbjct: 60  KGYSGTAIFTKKEPLNVYYGINMEHHDKEGRVITLEFEDFFMVTVYTPNSQSELARLEYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +   R     L  ++ ++  GD N+  +  D  NP     +A FT E R  
Sbjct: 120 M------EWEDDFRNYLLELSSKKGVVVCGDLNVAHKEIDLKNPKTNRKNAGFTDEERDK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F  L + GF D  R  +     +YS+W Y  ++   N G RID+ ++S      +  A I
Sbjct: 174 FSTLLSSGFIDTFRYFNPDIEGVYSWWSYRFNARKNNAGWRIDYFLVSNNLEDRIKEASI 233

Query: 242 DTKPRGWTKPSDHTPV 257
           DT+  G    SDH PV
Sbjct: 234 DTEILG----SDHCPV 245


>gi|20090923|ref|NP_616998.1| DNA-(apurinic or apyrimidinic site) lyase [Methanosarcina
           acetivorans C2A]
 gi|19916002|gb|AAM05478.1| DNA-(apurinic or apyrimidinic site) lyase [Methanosarcina
           acetivorans C2A]
          Length = 260

 Score =  196 bits (497), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 68/260 (26%), Positives = 116/260 (44%), Gaps = 12/260 (4%)

Query: 6   VATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETCGQ 62
           + +WNVN +RA +       + E   D+IC+QETK   +  P E      YH    +  +
Sbjct: 7   LISWNVNGLRAAMKKGFLDLLLEQKFDVICVQETKASPEKLPREVKNIPGYHNYFVSAER 66

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
             Y+GV   SK +P ++ T +  ++ D + RF+   +        + N+Y P+G   +  
Sbjct: 67  SGYSGVGTFSKQKPFKVETGMGIEEFDREGRFLRVDYE----NFTLMNIYFPNGK-ASQE 121

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           + + K+S+   FL +A+      + L+  GD N   +  D   P   E  + F  E R  
Sbjct: 122 RLEYKMSFYDAFLDYANALKAEGKKLVICGDVNTAHREIDLARPKENETTSGFLPEERAW 181

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
             K  + G+ D  R  +     YS+W     +  +N G R+D+  +S      + +A I 
Sbjct: 182 MDKFFDAGYLDTFRLFNSEGGNYSWWSLRTRARERNVGWRLDYFFVSENLRDNVKAAPIY 241

Query: 243 TKPRGWTKPSDHTPVIVSLD 262
            +  G    SDH PV + L+
Sbjct: 242 PEITG----SDHCPVGLELE 257


>gi|313637385|gb|EFS02862.1| exodeoxyribonuclease III [Listeria seeligeri FSL S4-171]
          Length = 251

 Score =  196 bits (497), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 65/262 (24%), Positives = 110/262 (41%), Gaps = 13/262 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      +    + DI CLQETK +      + L +   +     +
Sbjct: 1   MKLISWNVNGLRAAVKKGFLEYFDSVDADIFCLQETKLQAGQIDLD-LPAYKDYWNYAVK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +P+ +   L   + D + R I   F                   +   
Sbjct: 60  KGYSGTAIFTKTEPLSVQYGLGIPEHDDEGRVITLEFDKFFMVTVYTPNSQAELKRLDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +  +    ++L+  +P++  GD N+  +  D  NP     +A F+ E R  
Sbjct: 120 M------TFEDAILAYVKKLDETKPVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F      GF D+ R  +      YS+W Y  ++ ++N G RID+ ++S      L  A+I
Sbjct: 174 FTAFLEAGFVDSFRYFYPDLEDAYSWWSYRMNARARNTGWRIDYFVVSERLKDNLVDAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
                G    SDH PV + L+I
Sbjct: 234 HPDVLG----SDHCPVELELNI 251


>gi|332111582|gb|EGJ11564.1| exodeoxyribonuclease iii, ap endonuclease, family 1 [Rubrivivax
           benzoatilyticus JA2]
          Length = 258

 Score =  196 bits (497), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 110/261 (42%), Positives = 163/261 (62%), Gaps = 7/261 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+NVN I AR+  L  W+ E+ PD+ CLQE KT D+ FP + +++  Y     GQK
Sbjct: 1   MKIATFNVNGITARLPRLLEWLAESAPDVACLQELKTSDETFPLQAIEAAGYGAIWHGQK 60

Query: 64  SYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
            +NGVA+L++  QP+E +  LPGD  D  +R++EA        L +G LYLP+GNP    
Sbjct: 61  GFNGVAVLARGQQPVERLRGLPGDPDDTHSRYLEAQVG----ELIVGALYLPNGNPQPGP 116

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP--HDCYNPIIWENDACFTLEVR 180
           K+D K+ W++R    A+  + L+ P++ AGDYN++P     D Y+P  W+NDA    E R
Sbjct: 117 KFDYKLKWMQRLHEHAATLVGLDAPVVLAGDYNVVPTDAVRDIYSPKGWQNDALLQPESR 176

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           Q++Q+L  +GFTDA+   H    +Y++WDY+   W +N G+RIDH++L+  A + L +A 
Sbjct: 177 QAYQRLLELGFTDALATLHGDAAMYTYWDYFRQRWERNAGLRIDHLLLNAPAAARLKAAE 236

Query: 241 IDTKPRGWTKPSDHTPVIVSL 261
           +D   RG  KPSDH PV V L
Sbjct: 237 VDRFIRGREKPSDHAPVWVDL 257


>gi|241663220|ref|YP_002981580.1| exodeoxyribonuclease III Xth [Ralstonia pickettii 12D]
 gi|240865247|gb|ACS62908.1| exodeoxyribonuclease III Xth [Ralstonia pickettii 12D]
          Length = 269

 Score =  196 bits (497), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 95/266 (35%), Positives = 145/266 (54%), Gaps = 8/266 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPD-----IICLQETKTEDKNFPFETLQSLNYHIE 58
           + VATWNVNS++ R+ ++  W+ E   D     ++CLQE K  D  +P   L +  Y   
Sbjct: 1   MRVATWNVNSLKVRLPHVLQWLAEREADATPIDLLCLQELKLPDDRYPLAELDAAGYTSL 60

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDL---DVQARFIEATFTINTQTLRIGNLYLPH 115
             GQK+YNGVAILS+   +     +  +     D Q R + AT+ ++   +R+ + Y+P+
Sbjct: 61  FTGQKTYNGVAILSRKASVPEGRDVVKNIPGFTDDQQRIVAATYDVDGGPVRVISAYIPN 120

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
           G  + S K+  K+ W++    + +  +     L+  GD+NI P+  D ++P  WE     
Sbjct: 121 GQALDSDKFVYKLRWLEALQAWLTSEMAANPRLMLLGDFNIAPEDRDVHDPKKWEGQNLV 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
           + E R +F+ +Q  G  DA R       L+S+WDY    + +N G+RIDHIMLSPE   L
Sbjct: 181 SPEERAAFRAMQAAGLVDAFRMFEQEDKLFSWWDYRMFGFKRNAGLRIDHIMLSPELAKL 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
             S  ID  PR W +PSDHTPV+ +L
Sbjct: 241 CESCHIDRVPRTWEQPSDHTPVVAAL 266


>gi|148259957|ref|YP_001234084.1| exodeoxyribonuclease III Xth [Acidiphilium cryptum JF-5]
 gi|326403089|ref|YP_004283170.1| exodeoxyribonuclease III [Acidiphilium multivorum AIU301]
 gi|146401638|gb|ABQ30165.1| exodeoxyribonuclease III Xth [Acidiphilium cryptum JF-5]
 gi|325049950|dbj|BAJ80288.1| exodeoxyribonuclease III [Acidiphilium multivorum AIU301]
          Length = 256

 Score =  196 bits (497), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 106/258 (41%), Positives = 148/258 (57%), Gaps = 4/258 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS R R   +A ++K   PD++ LQE K E + FP    ++  Y  E  GQK
Sbjct: 1   MRIATWNVNSARTRAGLIADFLKREQPDLLLLQEIKCETQQFPAAAFEAEGYRAEVVGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVA+LS+         LPG++ D  ARFIE         L +GNLYLP+GN      
Sbjct: 61  AYNGVAVLSRGAVTVTHRRLPGEEEDAAARFIEIEAGG----LLVGNLYLPNGNSGGGDG 116

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W+++  R A+  LE +   I AGDYN+ P   D     +  +DA    E R +F
Sbjct: 117 FAAKLDWMEKLRRHAASLLEHDRDFILAGDYNVCPTDADLAKGALPADDALVRPESRAAF 176

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + L  +G TDA+RA H    LY+FWDY A +W +++G+RIDH +LSP     L + R+  
Sbjct: 177 RALIWLGLTDALRALHPDETLYTFWDYQAGAWQRDRGLRIDHALLSPRVAERLDTVRVAR 236

Query: 244 KPRGWTKPSDHTPVIVSL 261
           + R   +PSDH PVIVSL
Sbjct: 237 EERDKPQPSDHVPVIVSL 254


>gi|330993300|ref|ZP_08317236.1| Exodeoxyribonuclease III [Gluconacetobacter sp. SXCC-1]
 gi|329759702|gb|EGG76210.1| Exodeoxyribonuclease III [Gluconacetobacter sp. SXCC-1]
          Length = 261

 Score =  195 bits (496), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 94/259 (36%), Positives = 137/259 (52%), Gaps = 3/259 (1%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           ++ + TWNVNSIR R  ++  ++    PD++ LQE K     FP +  +   Y     GQ
Sbjct: 1   MMKLVTWNVNSIRQRCDHVLDYLAREQPDVLALQEIKCATDLFPADAFRKAGYECTAVGQ 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           KSYNGVA+L++       T LPG +             I T  L +GNLYLP+GN   S 
Sbjct: 61  KSYNGVAMLARQPFTVTHTALPGWE---TTPPQARYVEIRTGGLVVGNLYLPNGNSGGSA 117

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
            YD K+++++     A   L+  +  +  GDYN+ P   DC    +   DA    E R +
Sbjct: 118 GYDSKLAFMEALALHARGLLQAGQDFVLMGDYNVCPTDEDCAPGALPPTDALVRPESRAA 177

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F++L  +G TDA+RA H     Y+FWDY A +W ++ G+RIDH +LSP     L +A   
Sbjct: 178 FRRLLWLGLTDALRALHPAGRFYTFWDYQAAAWQRDSGLRIDHALLSPRVAERLLTALPA 237

Query: 243 TKPRGWTKPSDHTPVIVSL 261
              RG  +PSDH P+ ++L
Sbjct: 238 RDERGKPQPSDHVPLAITL 256


>gi|88854941|ref|ZP_01129607.1| exodeoxyribonuclease III [marine actinobacterium PHSC20C1]
 gi|88816102|gb|EAR25958.1| exodeoxyribonuclease III [marine actinobacterium PHSC20C1]
          Length = 278

 Score =  195 bits (496), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 72/277 (25%), Positives = 122/277 (44%), Gaps = 10/277 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+R R+  +  W+   + D++ +QE K + + FP +      Y +E  G  
Sbjct: 1   MRIATWNVNSVRTRVSRVVDWMLREDIDVLAMQEIKCKPEQFPHDAFTDAGYEVELHGLS 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQA------RFIEATFTINTQTLRIGNLYLPHGN 117
            +NGVA  S+    ++           +               +     R+ +LY+P+G 
Sbjct: 61  QWNGVAFASRLPMEDVTVGFDTQPGFGKPLDDGTIPIEARAIGVTVSGARLWSLYVPNGR 120

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACF 175
            + +  Y  K+ W+       S  +           GD+NI P   D ++   +E     
Sbjct: 121 ELDNPHYPYKLEWLANLAAQTSNWMRENPEQPLALMGDFNIAPLDIDVWDVAAFEGKTHI 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
           +   R +F   +  G  DA+R+       Y++WDY    + +N+G+RID I+ SP+   L
Sbjct: 181 SEPERAAFAAFEKAGLIDALRSRG--IKGYTYWDYQRLRFPRNEGMRIDFILGSPQFDEL 238

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQD 272
           +  A ID + R    PSDH PV+V L I       + 
Sbjct: 239 VTGASIDREERKGDGPSDHVPVVVDLAIDTEDDDDRP 275


>gi|86141021|ref|ZP_01059580.1| exodeoxyribonuclease [Leeuwenhoekiella blandensis MED217]
 gi|85832963|gb|EAQ51412.1| exodeoxyribonuclease [Leeuwenhoekiella blandensis MED217]
          Length = 255

 Score =  195 bits (496), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 88/263 (33%), Positives = 135/263 (51%), Gaps = 13/263 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETC 60
           + + T+NVN IRA I   L  W+K  NPD++ LQETK   +    +  +   YH    + 
Sbjct: 1   MKIITYNVNGIRAAIRKGLLDWLKAANPDVLLLQETKAHKEQLDIDLFEETGYHDYWFSA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GVAILSK +P  IV     D +D + R I A F      L + ++YLP G  + 
Sbjct: 61  QKKGYSGVAILSKKEPDNIVHGTGIDYMDHEGRNIRADFG----DLSVMSMYLPSGTNVD 116

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
               + K+ ++  F  ++ +  +    LI +GDYNI  +P D ++P+  +N + F    R
Sbjct: 117 R--LEHKLKYMADFQAYSEELRKTRPNLIVSGDYNICHEPIDIHDPVRLKNVSGFLPVER 174

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           +      N GFTD+ R  +     YS+W Y AD+ + NKG R+D+ M+S      +  A 
Sbjct: 175 EWLSGFINSGFTDSFRHLNPNVEQYSWWSYRADARANNKGWRLDYNMVSEPLKDKIKRAV 234

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263
           I  +     K SDH P +V LD+
Sbjct: 235 ILPEA----KHSDHCPALVELDL 253


>gi|313632791|gb|EFR99747.1| exodeoxyribonuclease III [Listeria seeligeri FSL N1-067]
          Length = 251

 Score =  195 bits (496), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 63/262 (24%), Positives = 108/262 (41%), Gaps = 13/262 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      +    + DI CLQETK +      +     +Y      +
Sbjct: 1   MKLISWNVNGLRAAVKKGFLEYFDSVDADIFCLQETKLQAGQIDLDLPAYKDY-WNYAVK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G    +K +P+ +   L  ++ D + R I   F                   +   
Sbjct: 60  KGYSGTXXFTKKEPLSVQYGLGIEEHDTEGRVITLEFEKFFMVTVYTPNSQAELKRLDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +  +    ++L+  +P++  GD N+  +  D  NP     +A F+ E R  
Sbjct: 120 M------TFEDAILAYVKKLDETKPVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F      GF D+ R  +      YS+W Y  ++ ++N G RID+ ++S      L  A+I
Sbjct: 174 FTAFLEAGFVDSFRYFYPDLEDAYSWWSYRMNARARNIGWRIDYFVVSERLKDNLVDAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
                G    SDH PV + L+I
Sbjct: 234 HPDVLG----SDHCPVELELNI 251


>gi|29346040|ref|NP_809543.1| exodeoxyribonuclease [Bacteroides thetaiotaomicron VPI-5482]
 gi|29337934|gb|AAO75737.1| exodeoxyribonuclease [Bacteroides thetaiotaomicron VPI-5482]
          Length = 253

 Score =  195 bits (496), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 82/262 (31%), Positives = 137/262 (52%), Gaps = 12/262 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60
           + + T+NVN +RA     L  W+ + NPDI+CLQETK +   +P E  ++L Y  ++ + 
Sbjct: 1   MKIITYNVNGLRAAASKGLPEWLVQENPDILCLQETKLQPDQYPAEVFEALGYKAYLYSA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GVAIL+K +P  +   +  +  D + RFI A F      L + ++Y P G    
Sbjct: 61  QKKGYSGVAILTKQEPDHVEYGMGIEAYDNEGRFIRADFG----DLSVVSVYHPSG-TSG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   K+ W++ F ++ ++  +    LI  GDYNI  +P D ++P+    ++ F  E R
Sbjct: 116 DERQAFKMVWLEDFQKYVTELRKTRPNLILCGDYNICHEPIDIHDPVRNATNSGFLPEER 175

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           +   +  + GF D+ R  +     Y++W Y  +S +KNKG RID+ M S     +L SA 
Sbjct: 176 EWMTRFLSAGFIDSFRLLYPEKQEYTWWSYRFNSRAKNKGWRIDYCMTSEPVRPMLKSAS 235

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I          SDH P+ + ++
Sbjct: 236 ILNDA----VHSDHCPMALEIE 253


>gi|224500776|ref|ZP_03669125.1| hypothetical protein LmonF1_14336 [Listeria monocytogenes Finland
           1988]
 gi|254829588|ref|ZP_05234275.1| exodeoxyribonuclease [Listeria monocytogenes FSL N3-165]
 gi|284802226|ref|YP_003414091.1| hypothetical protein LM5578_1982 [Listeria monocytogenes 08-5578]
 gi|284995368|ref|YP_003417136.1| hypothetical protein LM5923_1933 [Listeria monocytogenes 08-5923]
 gi|258602005|gb|EEW15330.1| exodeoxyribonuclease [Listeria monocytogenes FSL N3-165]
 gi|284057788|gb|ADB68729.1| hypothetical protein LM5578_1982 [Listeria monocytogenes 08-5578]
 gi|284060835|gb|ADB71774.1| hypothetical protein LM5923_1933 [Listeria monocytogenes 08-5923]
          Length = 251

 Score =  195 bits (496), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 65/261 (24%), Positives = 111/261 (42%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      + +E + DI CLQETK ++     +     +Y      +
Sbjct: 1   MRLISWNVNGLRAAVKKGFLEYFEEVDADIFCLQETKLQEGQIELDLPAYKDY-WNYAVK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +P+ +   L   + D + R I   F                   +   
Sbjct: 60  KGYSGTAIFTKVEPLSVQYGLGIPEHDTEGRVITLEFEEFFMVTVYTPNSQAELKRLDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +  +    + L+  +P++  GD N+  +  D  NP     +A F+ E R  
Sbjct: 120 M------TFEDAILEYVKNLDNTKPVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F    + GF D+ R  +      YS+W Y  ++ ++N G RID+ ++S      L  A+I
Sbjct: 174 FSAFLDAGFIDSFRYFYPDLTDAYSWWSYRMNARARNTGWRIDYFVVSERLKDKLVDAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
                G    SDH PV + L+
Sbjct: 234 HADVLG----SDHCPVELELN 250


>gi|299066602|emb|CBJ37792.1| EXODEOXYRIBONUCLEASE III [Ralstonia solanacearum CMR15]
          Length = 269

 Score =  195 bits (496), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 93/266 (34%), Positives = 141/266 (53%), Gaps = 8/266 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPD-----IICLQETKTEDKNFPFETLQSLNYHIE 58
           + VATWNVNS++ R+ ++  W+ E   D     ++CLQE K  D  +P   L++  Y   
Sbjct: 1   MRVATWNVNSLKVRLPHVLQWLGEREADATPIDLLCLQELKLPDDRYPLAELEAAGYASL 60

Query: 59  TCGQKSYNGVAILSKYQPIEIVTH---LPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
             GQK+YNGVAIL++   +              D Q R + AT+ +    +R+ + Y P+
Sbjct: 61  FTGQKTYNGVAILARKAAMPEGRDVVRNIPGFADEQQRVVAATYEVAGGPVRVISAYFPN 120

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
           G  + S K   K+ W+     +    +     L+  GD+NI P   D ++P  WE     
Sbjct: 121 GQALDSDKMVYKMRWLAALQAWLQAEMAAHPRLMLLGDFNIAPDDRDVHDPKKWEGMNLV 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
           + E R +F+ L++ G  DA R       L+S+WDY   ++ +N G+RIDHI+LSP+   L
Sbjct: 181 SPEERAAFRALESAGLVDAFRMFEQEDKLFSWWDYRLFAFRRNAGLRIDHILLSPDLARL 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
             S  ID  PRGW +PSDHTPV+ +L
Sbjct: 241 CESCHIDRVPRGWEQPSDHTPVVAAL 266


>gi|304314422|ref|YP_003849569.1| DNA lyase [Methanothermobacter marburgensis str. Marburg]
 gi|302587881|gb|ADL58256.1| predicted DNA lyase [Methanothermobacter marburgensis str. Marburg]
          Length = 257

 Score =  195 bits (496), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 64/266 (24%), Positives = 111/266 (41%), Gaps = 12/266 (4%)

Query: 1   MSVVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           M+ + + +WNVN +RA        W  +  PDI+CLQETK   +  P        Y    
Sbjct: 1   MAEIKIISWNVNGLRAVYRKGFLDWFMDEKPDILCLQETKASPEQLPRRLRHVEGYRSFF 60

Query: 60  CG--QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
               +K Y+GVA+ ++  P  I      +  D++ R   A F        + N+Y P+G 
Sbjct: 61  TPAERKGYSGVAMYTRIPPKSIREGFGVERFDIEGRIQVADFD----DFLLYNIYFPNGK 116

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
                    K+ +   FL   ++  +     +  GD+N   +  D   P    N + F  
Sbjct: 117 MSDER-LKYKLEFYDAFLEDVNRERDAGRNTVICGDFNTAHREIDLARPKENSNVSGFLP 175

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
             R    K    G+ D  R  ++    Y++W Y   +  +N G R+D+  ++ E    + 
Sbjct: 176 VERAWIDKFIENGYVDTFRMFNNESGQYTWWSYRTRARERNVGWRLDYFFVNEEFAKNVK 235

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263
            + I ++  G    SDH PV + +++
Sbjct: 236 RSWILSEVMG----SDHCPVGLEIEV 257


>gi|329298723|ref|ZP_08256059.1| exonuclease III [Plautia stali symbiont]
          Length = 268

 Score =  195 bits (496), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 80/268 (29%), Positives = 126/268 (47%), Gaps = 8/268 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +R+R H LAA ++++ PD+I LQETK  D  FP E +  L Y++   GQK
Sbjct: 1   MKFISFNINGLRSRPHQLAALVEQHQPDVIGLQETKVHDDMFPLEEVSKLGYNMFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            + GVA+L+K QP+ +    P D  D Q R I A        + + N Y P G       
Sbjct: 61  GHYGVALLTKTQPVAVRRGFPDDGEDSQRRLIMAEIPSPIGDITVINGYFPQGESRDHPI 120

Query: 124 -YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
            +  K  + +    +  Q+L  ++P++  GD NI           +     +      F 
Sbjct: 121 KFPAKEKFYRDLQSYLEQQLAADKPVLIMGDMNISSTDLDIGIGEENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+   +L   G  D  R  +      +S++DY +  +  N+G+RID ++ SP   S 
Sbjct: 181 PEEREWMDRLLQWGLVDTWREKNPETADRFSWFDYRSKGFDDNRGLRIDLLLASPPLASR 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              + ID   R   KPSDH PV  S  +
Sbjct: 241 CIDSGIDYAIRSMDKPSDHAPVWSSFKL 268


>gi|304396123|ref|ZP_07378005.1| exodeoxyribonuclease III [Pantoea sp. aB]
 gi|304356492|gb|EFM20857.1| exodeoxyribonuclease III [Pantoea sp. aB]
          Length = 272

 Score =  195 bits (496), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 80/267 (29%), Positives = 126/267 (47%), Gaps = 8/267 (2%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           ++   ++N+N +RAR H L A ++++ PD+I LQETK  D  FP E +  L YH+   GQ
Sbjct: 4   LMKFVSFNINGLRARPHQLQALVEQHQPDVIGLQETKVHDDMFPLEEVSKLGYHVFYHGQ 63

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K + GVA+L+K QP+ +    P DD + Q R I A        + + N Y P G      
Sbjct: 64  KGHYGVALLTKAQPVSVSRGFPDDDDESQRRLIVAEIPSPIGDITVINGYFPQGESRDHP 123

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175
            K+  K  + +   R  +  L  ++P++  GD NI           D     +      F
Sbjct: 124 TKFPAKEKFYRDLQRLLTDDLPADKPVLIMGDMNISSTDLDIGIGEDNRKRWLRTGKCSF 183

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R+   +L + G  D  R  +      +S++DY +  +  N+G+RID +++S    S
Sbjct: 184 LPEEREWMDRLLSWGLVDTWRVHNPEVADRFSWFDYRSKGFDDNRGLRIDLVLVSKNLAS 243

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261
                 ID   R   KPSDH P+  + 
Sbjct: 244 HCVETGIDYAIRSMEKPSDHAPIWSTF 270


>gi|294626440|ref|ZP_06705040.1| exodeoxyribonuclease III [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292599239|gb|EFF43376.1| exodeoxyribonuclease III [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
          Length = 259

 Score =  195 bits (496), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 87/259 (33%), Positives = 136/259 (52%), Gaps = 6/259 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A+WNVNS+  R+ +L  W+    PD++ +QETK ED  FP   L +L Y    CGQK
Sbjct: 1   MKIASWNVNSLNVRLPHLQQWLAAFAPDVVGIQETKLEDHKFPDAALAALGYRSVFCGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAILS+   +++   +PG D   Q              +RI NLY+ +G  + + K
Sbjct: 61  TYNGVAILSRSPAVDVQMGIPGLDDVQQRVIAATVDG-----VRIINLYVVNGQDVGTDK 115

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN-PIIWENDACFTLEVRQS 182
           Y  K+ W+     + +Q L+    L+  GD+NI P   D ++  +  E+    + + R +
Sbjct: 116 YAYKLRWLAAAHDWIAQELQRYPQLVVLGDFNIAPDARDVHDATVWNEHHILTSTDERAA 175

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
             KL  +G  DA R  +     +S+WDY    + +N G+RID  ++S    +    + ID
Sbjct: 176 LDKLLALGLHDAFRLHNQDAEHFSWWDYRQAGFRRNLGLRIDLTLVSDTLCARAVESGID 235

Query: 243 TKPRGWTKPSDHTPVIVSL 261
            +PR W +PSDH P  V L
Sbjct: 236 REPRTWERPSDHAPAWVRL 254


>gi|319779595|ref|YP_004130508.1| Exodeoxyribonuclease III [Taylorella equigenitalis MCE9]
 gi|317109619|gb|ADU92365.1| Exodeoxyribonuclease III [Taylorella equigenitalis MCE9]
          Length = 260

 Score =  195 bits (496), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 88/263 (33%), Positives = 143/263 (54%), Gaps = 3/263 (1%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           M  +TVA+WNVNS+  R+  +  W++E + D++CLQE K E +       +S+ Y I   
Sbjct: 1   MVTLTVASWNVNSLNVRLDQVLDWLREFDVDLLCLQELKMESQKIDSSLFESIGYGIYAL 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           GQK+YNGVA++SK+   ++V +LP  + D Q R +  T +I+ + +RI N+Y P+G+ + 
Sbjct: 61  GQKTYNGVALISKHPITDLVENLPNYE-DPQKRLLAGTLSIDKKQVRIVNVYCPNGSDLE 119

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
           S K+  K+ W      +   +L   E LI  GD+NI P+  D +    +      + + R
Sbjct: 120 SPKFSYKMEWFSALRTYIEDQLNTNENLILTGDFNIAPKDEDIHPK--YLGPILISPQER 177

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
             F+ L ++G  D  R      + +S+WDY    + +N G+RIDHI+ S       + + 
Sbjct: 178 AHFEALLDLGLVDTFRLFEQEQNSFSWWDYRQFGFKRNAGLRIDHILASSSLGKKCYKSW 237

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263
           ID K R   +PSDH PV+    +
Sbjct: 238 IDKKQRAHERPSDHAPVLAEFKL 260


>gi|311745078|ref|ZP_07718863.1| exodeoxyribonuclease III [Algoriphagus sp. PR1]
 gi|311302328|gb|EAZ81811.2| exodeoxyribonuclease III [Algoriphagus sp. PR1]
          Length = 253

 Score =  195 bits (496), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 72/262 (27%), Positives = 117/262 (44%), Gaps = 12/262 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60
           + + ++NVN IRA +      W+K+ +P++I LQE K  +        + L Y  +    
Sbjct: 1   MKIVSYNVNGIRAAMNKGFLDWLKQTDPEVIGLQEVKAMEDQIDTSIFKDLGYKVYWYPA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GVAILSK  P  I   +     D + R +E  F   +                 
Sbjct: 61  QKKGYSGVAILSKITPKSIHHGMGLQKYDDEGRLLEIEFEDFSF-----LSAYFPSGTTG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   K  ++     +       +  LI +GDYNI  +  D +NP+  +N + F  E R
Sbjct: 116 DIRQTFKYEFLDDIYGYIKDLRRTKPNLILSGDYNICHKAIDIHNPVSNKNSSGFLPEER 175

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
               K    GF D  R  +   H Y++W Y A++ +KN G RID+ M + +  + L  + 
Sbjct: 176 VWMDKFTESGFIDTFRHFNPEPHQYTWWSYRANARAKNLGWRIDYHMATKDMENRLKRSV 235

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I  +     K SDH P++V L+
Sbjct: 236 ILPEA----KHSDHCPILVELN 253


>gi|91205020|ref|YP_537375.1| exodeoxyribonuclease III [Rickettsia bellii RML369-C]
 gi|157827649|ref|YP_001496713.1| exodeoxyribonuclease III [Rickettsia bellii OSU 85-389]
 gi|91068564|gb|ABE04286.1| Exodeoxyribonuclease III [Rickettsia bellii RML369-C]
 gi|157802953|gb|ABV79676.1| Exodeoxyribonuclease III [Rickettsia bellii OSU 85-389]
          Length = 261

 Score =  195 bits (496), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 104/261 (39%), Positives = 145/261 (55%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+NSI+ RI+ L  ++   NPD++ LQE K E   FPFE L  L Y+    GQK
Sbjct: 1   MKIATWNINSIKMRINILRDFLANENPDVLLLQELKCESDKFPFEELSDLPYNFYVHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           SYNGVAILSK+   EIV   P +    QARFIEA  ++      I +LY P+G+ + S K
Sbjct: 61  SYNGVAILSKFPADEIVKDFPNNHCSDQARFIEARISLPIGFCNIISLYAPNGSMVGSDK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+++   F  + S +   +E  I  GD+NI P   D Y+P    N  CFT   ++  
Sbjct: 121 FTAKLAFYDSFFNYLSSKKSFDEKTIIGGDFNIAPFDIDVYSPTALANTTCFTEIEQKKM 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + + N GF D  R  H     +S+WDY A  + +NKG+RID I+ S  +   L +  +D 
Sbjct: 181 RTILNSGFEDCYRFLHPKKQEFSWWDYRAGCFEQNKGMRIDMILGSNNSIDYLENCYMDY 240

Query: 244 KPRGWTKPSDHTPVIVSLDIP 264
             R   KPSDH PVI +   P
Sbjct: 241 NLRTKEKPSDHIPVIANFKNP 261


>gi|19703399|ref|NP_602961.1| exodeoxyribonuclease III [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|296328758|ref|ZP_06871272.1| exodeoxyribonuclease III [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
 gi|19713467|gb|AAL94260.1| Exodeoxyribonuclease III [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|296154093|gb|EFG94897.1| exodeoxyribonuclease III [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
          Length = 253

 Score =  195 bits (496), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 73/261 (27%), Positives = 113/261 (43%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN IRA I      +  E N DI CLQETK        E L+  + +     +
Sbjct: 1   MKLISWNVNGIRAAIKKGFLDYFNEQNADIFCLQETKLSAGQLDLE-LKGYHQYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +P+ +   L  ++ D + R I   F                   +   
Sbjct: 60  KGYSGTAIFTKQEPLSVSYGLGIEEHDKEGRVITLEFEKFYMVTVYTPNSKDELLRLDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +   R   + LE ++P++  GD N+  +  D  NP     +A FT E R  
Sbjct: 120 M------VWEDEFRKYLKNLEKKKPVVVCGDLNVAHKEIDLKNPKTNRRNAGFTDEERGK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L + GF D  R  +     +YS+W Y   +   N G RID+ ++S      L  A I
Sbjct: 174 FTELLDSGFIDTFRYFYPNLEQVYSWWSYRGRARENNAGWRIDYFVVSKGLEKSLVDAEI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            ++  G    SDH PV++ L+
Sbjct: 234 HSQIEG----SDHCPVVLFLE 250


>gi|121602003|ref|YP_988961.1| exodeoxyribonuclease III [Bartonella bacilliformis KC583]
 gi|121602536|ref|YP_988991.1| exodeoxyribonuclease III [Bartonella bacilliformis KC583]
 gi|120614180|gb|ABM44781.1| exodeoxyribonuclease III [Bartonella bacilliformis KC583]
 gi|120614713|gb|ABM45314.1| exodeoxyribonuclease III [Bartonella bacilliformis KC583]
          Length = 263

 Score =  195 bits (495), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 136/259 (52%), Positives = 183/259 (70%), Gaps = 1/259 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+  I+AR   L  W+++N PDI+CLQETKT D+NFP +T++SL YHIET GQK
Sbjct: 1   MRIATWNIAGIKARHETLCKWLQQNQPDIVCLQETKTIDENFPRDTIESLGYHIETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVAILSK +P EI+THLPG++ D QAR+IEA ++ N   +RI ++YLP+GNPI S K
Sbjct: 61  KFNGVAILSKKRPDEIITHLPGNNNDEQARYIEAVYSTNKGAIRIASVYLPNGNPINSEK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W++R    A   L  EEPLI AGDYN+IP   D  NP  W++DA F L+ RQ+F
Sbjct: 121 YLYKMEWMERLYTHAKSLLTYEEPLILAGDYNVIPTLSDAKNPQEWKHDALFLLQTRQAF 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q++ ++GF DA+R+  +    +SFW++ A +W KN GIRIDH +LS EA   L  A   T
Sbjct: 181 QRIIHLGFYDALRSVTEDP-SFSFWNFQAGAWFKNNGIRIDHFLLSSEAIDQLICAYSQT 239

Query: 244 KPRGWTKPSDHTPVIVSLD 262
           + RG+  PSDHTPV + LD
Sbjct: 240 EVRGYKNPSDHTPVWIELD 258


>gi|288574097|ref|ZP_06392454.1| exodeoxyribonuclease III Xth [Dethiosulfovibrio peptidovorans DSM
           11002]
 gi|288569838|gb|EFC91395.1| exodeoxyribonuclease III Xth [Dethiosulfovibrio peptidovorans DSM
           11002]
          Length = 259

 Score =  195 bits (495), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 91/260 (35%), Positives = 137/260 (52%), Gaps = 5/260 (1%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64
           T+AT+NVNS+R+R+  L  W+ ++  D++CLQETK  D++FP +    + Y +   GQKS
Sbjct: 4   TIATFNVNSVRSRLPILERWLNDSKVDVLCLQETKARDEDFPLQAFVDMGYFVAFRGQKS 63

Query: 65  YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124
           YNGVAI S  +P EIV          +  F     ++    + + N Y+P G  I    Y
Sbjct: 64  YNGVAIASLEEPDEIVYGFDDGK---EPVFDTRALSVRFGDIWVMNTYVPQGKSIDHDDY 120

Query: 125 DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ 184
             K  +++R  R  S R+   + +++ GD N+ P+  D  NP       CF  ++R  F 
Sbjct: 121 LMKQEFLRRTQRTISDRISDGKRVLWVGDMNVAPEEKDVANPKNKAKHVCFHRDIRDLFG 180

Query: 185 KLQNMGFTDAIRATHDTHHLYSFWDYY-ADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            +      D  R+       +SFWDY   ++  +N G RIDHI+ SP+   L   + +  
Sbjct: 181 TVCQG-LVDVFRSHRPEEGEFSFWDYRVKNALDRNIGWRIDHILASPDLAKLSSDSWVYR 239

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
            PRGW KPSDHTPV+ S D+
Sbjct: 240 DPRGWEKPSDHTPVLASFDL 259


>gi|168214660|ref|ZP_02640285.1| exodeoxyribonuclease III [Clostridium perfringens CPE str. F4969]
 gi|170713849|gb|EDT26031.1| exodeoxyribonuclease III [Clostridium perfringens CPE str. F4969]
          Length = 250

 Score =  195 bits (495), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 66/256 (25%), Positives = 107/256 (41%), Gaps = 13/256 (5%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      + K  + DI CLQETK ++     + L+    +     +
Sbjct: 1   MKLISWNVNGLRACVKKGFLDYFKSEDADIFCLQETKLQEGQIDLD-LEGYFQYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +P+ +   +  +  D + R I   F                   +   
Sbjct: 60  KGYSGTAIFTKKEPLNVYYGINMEHHDKEGRVITLEFEDFFMVTVYTPNSQSELARLEYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +   R     L  ++ ++  GD N+  +  D  NP     +A FT E R  
Sbjct: 120 M------EWEDDFRNYLLELSSKKGVVVCGDLNVAHKEIDLKNPKTNRKNAGFTDEERDK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F  L + GF D  R  +     +YS+W Y  ++   N G RID+ ++S      +  A I
Sbjct: 174 FSTLLSSGFIDTFRYFNPDLEGVYSWWSYRFNARKNNAGWRIDYFLVSNNLEDRIKEASI 233

Query: 242 DTKPRGWTKPSDHTPV 257
           DT+  G    SDH PV
Sbjct: 234 DTEILG----SDHCPV 245


>gi|187779869|ref|ZP_02996342.1| hypothetical protein CLOSPO_03465 [Clostridium sporogenes ATCC
           15579]
 gi|187773494|gb|EDU37296.1| hypothetical protein CLOSPO_03465 [Clostridium sporogenes ATCC
           15579]
          Length = 253

 Score =  195 bits (495), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 67/262 (25%), Positives = 109/262 (41%), Gaps = 12/262 (4%)

Query: 4   VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC-- 60
           + + +WNVN +RA    N   WI E NPDI+C+QETK ++            Y+      
Sbjct: 1   MRIYSWNVNGLRAVAKKNFLEWIGEENPDILCIQETKLQENQLEDNIKNIDGYYSYFSFA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GVA  +K +PI +   +  +  D + R +   F        I            
Sbjct: 61  HKKGYSGVATYTKEEPISVKHGIGIERFDSEGRILITEFKDF-----ILLNIYFPNGQRD 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   K+ + +    +  + +E  + L+  GDYN      D  NP   E  + F    R
Sbjct: 116 EERLQYKLDFYEALFNYCDELVEEGKKLVICGDYNTAHNEIDLKNPKANEKASGFLRIER 175

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
               K+   G+ D  R  +     YS+W Y   +  +N G RID+  +S      + +  
Sbjct: 176 DWLDKIIERGYIDTFRNMNPDKIKYSWWSYRFKARERNAGWRIDYHFVSNNLLDRVENTE 235

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I  +  G    SDH PV++ L+
Sbjct: 236 ILNEVYG----SDHCPVMLELE 253


>gi|169345728|ref|ZP_02865687.1| exodeoxyribonuclease III [Clostridium perfringens C str. JGS1495]
 gi|169297128|gb|EDS79244.1| exodeoxyribonuclease III [Clostridium perfringens C str. JGS1495]
          Length = 250

 Score =  195 bits (495), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 66/256 (25%), Positives = 107/256 (41%), Gaps = 13/256 (5%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      + K  + DI CLQETK ++     + L+    +     +
Sbjct: 1   MKLISWNVNGLRACVKKGFLDYFKSEDADIFCLQETKLQEGQIDLD-LEGYFQYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +P+ +   +  +  D + R I   F                   +   
Sbjct: 60  KGYSGTAIFTKKEPLNVYYGINMEHHDKEGRVITLEFEDFFMVTVYTPNSQSELARLEYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +   R     L  ++ ++  GD N+  +  D  NP     +A FT E R  
Sbjct: 120 M------EWEDDFRNYLLELSSKKGVVVCGDLNVAHKEIDLKNPKTNRKNAGFTDEERDK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F  L + GF D  R  +     +YS+W Y  ++   N G RID+ ++S      +  A I
Sbjct: 174 FSTLLSSGFIDTFRYFNPDLEGVYSWWSYRFNARKNNAGWRIDYFLVSNNLEDRIKEAFI 233

Query: 242 DTKPRGWTKPSDHTPV 257
           DT+  G    SDH PV
Sbjct: 234 DTEILG----SDHCPV 245


>gi|149926852|ref|ZP_01915111.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Limnobacter
           sp. MED105]
 gi|149824404|gb|EDM83622.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Limnobacter
           sp. MED105]
          Length = 266

 Score =  195 bits (495), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 86/256 (33%), Positives = 128/256 (50%), Gaps = 1/256 (0%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSY 65
           +ATWNVNS++ R+ +L  W++ N  D++ LQE K  D+NFP   L++  Y     GQK+Y
Sbjct: 10  LATWNVNSLKVRLPHLLQWLEGNPVDLLGLQELKLTDENFPLTELEAAGYGAVYAGQKTY 69

Query: 66  NGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYD 125
           NGVAIL K   +     +  +                   LR  + Y+ +G+ + S K++
Sbjct: 70  NGVAILYKKATMPEPVDVQVNLPSFPDEQKRVIAATFGD-LRFISAYVVNGSEVGSDKFE 128

Query: 126 DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQK 185
            K +W+   L+     L     L   GDYNI P   D ++P  W      + + R  F  
Sbjct: 129 YKKAWLDALLKDCDAWLAQYPKLALVGDYNIAPDDRDVHDPKAWAGQVLCSDDERGRFNT 188

Query: 186 LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKP 245
           L +MG  D+ R        +S+WDY    + KNKG+RIDH++LS        ++ ID  P
Sbjct: 189 LLDMGLVDSFRLFEQPEKTFSWWDYRMLGFQKNKGLRIDHVLLSKPLAERCTASVIDRAP 248

Query: 246 RGWTKPSDHTPVIVSL 261
           R W KPSDH P + +L
Sbjct: 249 RKWEKPSDHAPAVATL 264


>gi|291617653|ref|YP_003520395.1| XthA [Pantoea ananatis LMG 20103]
 gi|291152683|gb|ADD77267.1| XthA [Pantoea ananatis LMG 20103]
 gi|327394080|dbj|BAK11502.1| exodeoxyribonuclease III XthA [Pantoea ananatis AJ13355]
          Length = 268

 Score =  195 bits (495), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 84/266 (31%), Positives = 129/266 (48%), Gaps = 8/266 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A ++++ PD+I LQETK  D  FP E +  L Y++   GQK
Sbjct: 1   MKFISFNINGLRARPHQLEALVEKHQPDVIGLQETKVHDDMFPLEDVAKLGYNVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122
            + GVA+L+K QP+ +    PGDD D Q R I A        + + N Y P G       
Sbjct: 61  GHYGVALLTKVQPVSVRRGFPGDDDDAQRRLIMAEIPSPIGDITVINGYFPQGESRDHPT 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  + +    + S  L  ++P++  GD NI           D     +      F 
Sbjct: 121 KFPAKEKFYRDLQSYLSDSLAADKPVLIMGDMNISSTDLDIGIGEDSRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+   +L + G  D  RA +   +  +S++DY +  +  N+G+RID ++ S    S 
Sbjct: 181 PEEREWMDRLLSWGLVDTWRAQNPEINDRFSWFDYRSKGFDDNRGLRIDLLLASTGLASH 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
                ID + RG  KPSDH PV  + 
Sbjct: 241 CIETGIDYEIRGMEKPSDHAPVWSTF 266


>gi|167762826|ref|ZP_02434953.1| hypothetical protein BACSTE_01184 [Bacteroides stercoris ATCC
           43183]
 gi|167699166|gb|EDS15745.1| hypothetical protein BACSTE_01184 [Bacteroides stercoris ATCC
           43183]
          Length = 266

 Score =  195 bits (495), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 83/261 (31%), Positives = 137/261 (52%), Gaps = 12/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60
           + + T+NVN +RA +   L  W+ +  PD++CLQETK + + +P E L +L Y  ++ + 
Sbjct: 13  MKIITYNVNGLRAAVSKGLPEWLAKEQPDVLCLQETKLQPEQYPAEALDALGYRHYLHSA 72

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GVAIL+K +P  +   +  ++ D + RF+ A +      L + ++Y P G    
Sbjct: 73  RKKGYSGVAILTKREPDYVEYGMGMEEYDSEGRFVRADYG----DLSVVSVYHPSG-TSG 127

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   K+ W++ F R+A + L     L+  GDYNI  +  D ++P+    ++ F  E R
Sbjct: 128 DERQAFKMEWLEHFRRYAVELLRTRPKLVLCGDYNICHEAIDIHDPVRNATNSGFLPEER 187

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           +   +  N GF D  R  H     Y++W Y  +S +KNKG RID+ M S     +L  AR
Sbjct: 188 EWMTRFLNEGFIDTFRLLHPDSREYTWWSYRFNSRAKNKGWRIDYCMASEAVRPMLKEAR 247

Query: 241 IDTKPRGWTKPSDHTPVIVSL 261
           I          SDH P+++ L
Sbjct: 248 ILNDA----VHSDHCPMMLEL 264


>gi|290893090|ref|ZP_06556079.1| exodeoxyribonuclease [Listeria monocytogenes FSL J2-071]
 gi|290557450|gb|EFD90975.1| exodeoxyribonuclease [Listeria monocytogenes FSL J2-071]
          Length = 251

 Score =  195 bits (495), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 65/262 (24%), Positives = 112/262 (42%), Gaps = 13/262 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      + +E + DI CLQETK ++     +     +Y      +
Sbjct: 1   MKLISWNVNGLRAAVKKGFLEYFEEVDSDIFCLQETKLQEGQIELDLPAYKDY-WNYAVK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +P+ +   L   + D + R I   F                   +   
Sbjct: 60  KGYSGTAIFTKVEPLSVQYGLGVPEHDTEGRVITLEFEEFFMVTVYTPNSQAELKRLDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +  +    + L+  +P++  GD N+  +  D  NP     +A F+ E R  
Sbjct: 120 M------TFEDAILEYVKNLDKTKPVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F    + GF D+ R  +      YS+W Y  ++ ++N G RID+ ++S      L  A+I
Sbjct: 174 FSAFLDAGFIDSFRYFYPDLTDAYSWWSYRMNARARNTGWRIDYFVVSERLKDKLVDAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
                G    SDH PV + L++
Sbjct: 234 HADVLG----SDHCPVELELNL 251


>gi|115525646|ref|YP_782557.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris BisA53]
 gi|115519593|gb|ABJ07577.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris BisA53]
          Length = 256

 Score =  195 bits (495), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 95/259 (36%), Positives = 139/259 (53%), Gaps = 3/259 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+N+N+I  R+ +L AW+K   PD +CLQE KTE   FP + L+   Y     GQK
Sbjct: 1   MKIATFNINNINNRLPSLLAWLKSAKPDAVCLQELKTEQHKFPEKALRDAGYSAVWVGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           S+NGVAILSK  P+ ++                         + I  LY P+GNP    K
Sbjct: 61  SWNGVAILSKKNPVVVIR---TRLPGDPTDSEARYVEGAVGGVVIACLYAPNGNPQPGPK 117

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +D K++W+KR  + A   L+   P++ AGD+N+ P   D Y    W  DA    E R ++
Sbjct: 118 FDRKLAWMKRLHKHAGSLLKSGAPVVIAGDFNVAPTELDIYPTKSWNKDALIQPESRNAY 177

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            KL   G+TDAIR+ H    +YSFW Y+ + + ++ G+R+DH++LSP+    L  A +D 
Sbjct: 178 AKLVGQGWTDAIRSLHPEQRIYSFWTYWRNRFERDDGLRLDHLLLSPDVAPRLVKAGVDR 237

Query: 244 KPRGWTKPSDHTPVIVSLD 262
             R     SDH PV + L 
Sbjct: 238 AVRARDGASDHAPVWIVLK 256


>gi|110801105|ref|YP_695823.1| exodeoxyribonuclease III [Clostridium perfringens ATCC 13124]
 gi|110675752|gb|ABG84739.1| exodeoxyribonuclease III [Clostridium perfringens ATCC 13124]
          Length = 250

 Score =  195 bits (495), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 67/256 (26%), Positives = 113/256 (44%), Gaps = 13/256 (5%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      + K  + DI CLQETK ++     + L+    +     +
Sbjct: 1   MKLISWNVNGLRACVKKGFLDYFKSEDADIFCLQETKLQEGQIDLD-LEGYFQYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +P+ +   +  +  D + R I   F                 +     
Sbjct: 60  KGYSGTAIFTKKEPLNVYYGINMEHHDKEGRVITLEFED-----LFMVTVYTPNSQSELA 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           + + ++ W   F  +  + L  ++ ++  GD N+  +  D  NP     +A FT E R  
Sbjct: 115 RLEYRMEWEDDFRNYLLE-LSSKKGVVVCGDLNVAHKEIDLKNPKTNRKNAGFTDEERDK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F  L + GF D  R  +     +YS+W Y  ++   N G RID+ ++S      +  A I
Sbjct: 174 FSTLLSSGFIDTFRYFNPDLEGVYSWWSYRFNARKNNAGWRIDYFLVSNNLEDRIKEASI 233

Query: 242 DTKPRGWTKPSDHTPV 257
           DT+  G    SDH PV
Sbjct: 234 DTEILG----SDHCPV 245


>gi|225175437|ref|ZP_03729432.1| exodeoxyribonuclease III Xth [Dethiobacter alkaliphilus AHT 1]
 gi|225169189|gb|EEG77988.1| exodeoxyribonuclease III Xth [Dethiobacter alkaliphilus AHT 1]
          Length = 260

 Score =  195 bits (495), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 86/264 (32%), Positives = 139/264 (52%), Gaps = 8/264 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKE--NNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + T+NVNS+RAR   L  W+++   + D++CLQE K  D  FP +  +SL Y     G
Sbjct: 1   MKICTFNVNSVRAREELLLKWLEKRGTDIDVLCLQEIKVTDDKFPRQAFESLGYQCTVFG 60

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           Q+ YNGVA+ SK    ++VT    ++ D Q R +          + + N+Y PHG+   S
Sbjct: 61  QQRYNGVAVCSKEGAQQVVTGFGDENWDQQKRIMHCRIG----EVTVVNVYAPHGDLRGS 116

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            KY  K  W + FL +  +     +PL+  GD N+  +  D ++P + E+  C   E R+
Sbjct: 117 EKYIYKQKWYRYFLEYLQRNFSPSDPLVVVGDLNVALEDLDVHDPKLLEDTVCTMPEERR 176

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             Q + + G  D+ R  +     +++WDY   +  ++KG+RID+I+ S      +    +
Sbjct: 177 WLQDVLDWGLVDSFRHLNPDAQSFTWWDYVGGAIWQDKGMRIDYILCSKPLAEKMAEVEV 236

Query: 242 DTKPRGW--TKPSDHTPVIVSLDI 263
           D  PR     KPSDH PVI+SL++
Sbjct: 237 DLWPRRRRTPKPSDHAPVILSLNL 260


>gi|163750216|ref|ZP_02157458.1| exodeoxyribonuclease III [Shewanella benthica KT99]
 gi|161330072|gb|EDQ01056.1| exodeoxyribonuclease III [Shewanella benthica KT99]
          Length = 268

 Score =  195 bits (495), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 79/264 (29%), Positives = 128/264 (48%), Gaps = 9/264 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N IRAR+H L A I  + PDII LQETK  D  FP   ++++ Y +   G K
Sbjct: 1   MKIVSFNINGIRARLHQLQALIDAHQPDIIGLQETKAHDDVFPAADVEAMGYKVHYHGGK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLD-VQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121
           ++ GVA+LSK +P+++    P D  D  +   I      N + L + N Y P G+ ++  
Sbjct: 61  AHYGVAMLSKLEPVKVQKGFPTDSEDAQRRMIIATFTQENGRPLTVLNGYFPQGDNVSHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175
           TKY  K  + K  + + ++    +E +   GD NI P               +      F
Sbjct: 121 TKYPAKRQFYKDLMTYLNENHTPDEDIAIIGDINISPVDLDIGIGEPNAKRWLRTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
            +E R+  + L + G  D  R  H      YS++DY +  +  N+G+RID ++ +     
Sbjct: 181 QVEEREWLKTLMDWGLLDTFRELHPQRTERYSWFDYRSKGFVDNRGLRIDVVLATKSLNE 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVI 258
            L  + +D   R   KPSDH P+ 
Sbjct: 241 RLVESDVDYDLRAIEKPSDHAPIW 264


>gi|124025252|ref|YP_001014368.1| exodeoxyribonuclease III [Prochlorococcus marinus str. NATL1A]
 gi|123960320|gb|ABM75103.1| exodeoxyribonuclease III [Prochlorococcus marinus str. NATL1A]
          Length = 275

 Score =  195 bits (495), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 96/272 (35%), Positives = 142/272 (52%), Gaps = 4/272 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + VATWNVNSIR+RI ++  W+  N  DI+CLQETKTEDK FP E    L Y +   GQK
Sbjct: 1   MLVATWNVNSIRSRIDHVKEWLITNKIDILCLQETKTEDKFFPIENFSDLGYEVSISGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT----INTQTLRIGNLYLPHGNPI 119
           SYNGVAI+S++    I         D Q   I +        +   +RI N+Y+P+G+ I
Sbjct: 61  SYNGVAIISRFPINNIKIGFNEVINDYQDLSILSEQKRIISADINDIRIINVYVPNGSSI 120

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
            S K+  K  W++    +  +  +   P+   GD+NI P+  D + P  +E     + + 
Sbjct: 121 NSDKFIYKKKWLECLQVYLREINKNNTPICLLGDFNIAPEDRDIHTPSRYEESIMASSKE 180

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R+  +        D  R        +S+WDY   +W ++KG RIDHI L+ +  S  +S 
Sbjct: 181 RELLKDALGGELEDVFRIFEPGEKNWSWWDYRHSAWERDKGWRIDHIYLTEDILSCANSC 240

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271
            ID + R   KPSDH PV+V ++ P    + +
Sbjct: 241 WIDKEQRSREKPSDHAPVVVDINWPPSDIENE 272


>gi|326384218|ref|ZP_08205900.1| exodeoxyribonuclease III Xth [Gordonia neofelifaecis NRRL B-59395]
 gi|326197083|gb|EGD54275.1| exodeoxyribonuclease III Xth [Gordonia neofelifaecis NRRL B-59395]
          Length = 294

 Score =  195 bits (495), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 81/292 (27%), Positives = 140/292 (47%), Gaps = 18/292 (6%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFE---TLQSLNYHIETC 60
           + +ATWNVNS++ R+  L  W+ +  PD++CLQETK  D+ F  E    L +  Y     
Sbjct: 1   MRLATWNVNSVKQRVPRLLPWLDDRQPDVVCLQETKVSDEAFAAELGDELAARGYEFAHA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT--LRIGNLYLPHGNP 118
           GQ  +NGVA+LS+    ++    P                ++     +R+ ++Y+P+G  
Sbjct: 61  GQGQWNGVALLSRVGLDDVRVAFPDAPGFPDTTGEPEGRAVSAVCDGVRVYSVYVPNGRE 120

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
           + S  Y+ K++W+++         +     +  GDYNIIP   DC++P  +      T  
Sbjct: 121 VDSDHYNYKLNWLEKLRLAVEPDADT---TVICGDYNIIPTDADCFDPEAFVGHTHVTPA 177

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
            R++F+ L+ +G  D +R       +Y++WDY A  + K+ G+RID ++          +
Sbjct: 178 EREAFEALKALGLHDVMRDHWPDKQIYTYWDYRAGMFHKDLGMRIDFLLAGGSVAERAKA 237

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIP----------EPRKKQQDSTSQNMKP 280
           + +D + R  TKPSDH PV + LD+            P +  + +      P
Sbjct: 238 SWVDRQARKGTKPSDHAPVFLDLDVAPDGDVGPVVPPPSRPSKPAAGSVKLP 289


>gi|109639337|gb|ABG36534.1| exodeoxyribonuclease III [Haemophilus ducreyi]
          Length = 267

 Score =  195 bits (495), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 85/267 (31%), Positives = 126/267 (47%), Gaps = 8/267 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A I ++ PD+I LQE K  D++FP + ++ L YH+   GQK
Sbjct: 1   MKFISFNINGLRARPHQLEAIINKHQPDVIGLQEIKVADEDFPHQLVEHLGYHVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122
            + GVA+L+K QP+ I    P D  D Q R I A    +   L + N Y P G      T
Sbjct: 61  GHYGVALLTKKQPLTIRKGFPNDTADAQKRMIMAEINTDFGILTVLNGYFPQGENRQHET 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  +      +    L  + P+I  GD NI                 + E    F 
Sbjct: 121 KFSAKAKFYADLQHYLETTLTADNPIIIMGDMNICSTDLDIGIGEANRKRWLREGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+   +L + G  D  RA H  T   +S++DY +  ++ N+G+RID I+ S    + 
Sbjct: 181 PEEREWLNRLYHYGLVDTFRAMHPTTTDQFSWFDYRSKGFNDNRGLRIDLILASTTLANH 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262
                ID + R   KPSDH P+     
Sbjct: 241 CVETGIDLEIRAMEKPSDHAPIWAVFK 267


>gi|224539496|ref|ZP_03680035.1| hypothetical protein BACCELL_04401 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224518891|gb|EEF87996.1| hypothetical protein BACCELL_04401 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 254

 Score =  195 bits (495), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 81/262 (30%), Positives = 139/262 (53%), Gaps = 12/262 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60
           + + T+NVN +RA +   L  W+++   D++C+QETK +   +P E L +L Y  ++ + 
Sbjct: 1   MKIITYNVNGLRAAVSKGLPEWLEQEQADVVCIQETKLQPDQYPEEALSTLGYKHYLYSA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GVAIL+K +P  +   +  ++ D + RFI A F      + + ++Y P G    
Sbjct: 61  QKKGYSGVAILTKKEPDHVEYGMGIEEYDNEGRFIRADFG----DISVVSVYHPSG-TSG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   K+ W+++F  + ++  +    LI  GDYNI  +P D ++PI    ++ F  E R
Sbjct: 116 DERQAFKMVWLEKFQEYVTELRKSRPKLILCGDYNICHEPIDIHDPIRNATNSGFLPEER 175

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           +   +  N GF D  R  H     Y++W Y  +S +KNKG RID+ M++     LL  AR
Sbjct: 176 EWMTRFLNAGFIDTFRLLHPEQQEYTWWSYRFNSRAKNKGWRIDYCMVTEPVRPLLKEAR 235

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I          SDH P+++ ++
Sbjct: 236 ILNDA----VHSDHCPMLLDIE 253


>gi|28211273|ref|NP_782217.1| exodeoxyribonuclease III [Clostridium tetani E88]
 gi|28203713|gb|AAO36154.1| exodeoxyribonuclease III [Clostridium tetani E88]
          Length = 260

 Score =  195 bits (494), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 75/266 (28%), Positives = 120/266 (45%), Gaps = 12/266 (4%)

Query: 1   MSVVTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HI 57
           M  + + +WNVN +RA    N   W++E  PD+ CLQETK +D            Y  + 
Sbjct: 1   MIKMRIFSWNVNGLRAIAKKNFFKWVEEEKPDVFCLQETKIQDHQLEDNLKNIEGYKSYF 60

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
               +K Y+GVA  +K +P  ++  +  ++ D + R + + F        + N+Y P+G 
Sbjct: 61  SFAEKKGYSGVATYTKTEPKSVLNGIGIEEFDNEGRVLISEFE----EFTLLNIYFPNGQ 116

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
                  D K+ +    L + +  +   + LI  GDYN   +  D  NP   E  + F  
Sbjct: 117 MNDER-LDYKLRFYDAILDYCNDLVSKGKKLIICGDYNTAHREIDLKNPKNNEKYSGFLP 175

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
             R+   K  N G+ D  R  +     YS+W Y   +  +N G RID+  +S     L+ 
Sbjct: 176 IEREWIDKFINNGYVDVYRNFYPEKVEYSWWSYRFKARERNAGWRIDYFFVSDNVLPLIK 235

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263
             +I T+  G    SDH P+ + LDI
Sbjct: 236 DTKIHTEVLG----SDHCPIELILDI 257


>gi|33152736|ref|NP_874089.1| exonuclease III [Haemophilus ducreyi 35000HP]
 gi|1388153|gb|AAB49625.1| exonuclease III [Haemophilus ducreyi]
 gi|33148960|gb|AAP96478.1| exodeoxyribonuclease III [Haemophilus ducreyi 35000HP]
          Length = 267

 Score =  195 bits (494), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 85/267 (31%), Positives = 125/267 (46%), Gaps = 8/267 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A I ++ PD+I LQE K  D++FP + ++ L YH+   GQK
Sbjct: 1   MKFISFNINGLRARPHQLEAIINKHQPDVIGLQEIKVADEDFPHQLVEHLGYHVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122
            + GVA+L+K QP+ I    P D  D Q R I A    +   L + N Y P G      T
Sbjct: 61  GHYGVALLTKKQPLTIRKGFPNDTADAQKRMIMAEINTDFGILTVLNGYFPQGENRQHET 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
           K+  K  +      +    L    P+I  GD NI                 + E    F 
Sbjct: 121 KFPAKAKFYADLQHYLETALTAYNPIIIMGDMNICSTDLDIGIGEANRKRWLREGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+   +L + G  D  RA H  T   +S++DY +  ++ N+G+RID I+ S    + 
Sbjct: 181 PEEREWLDRLYHYGLVDTFRAMHPTTTDQFSWFDYRSKGFNDNRGLRIDLILASTTLANH 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262
                ID + R   KPSDH P+     
Sbjct: 241 CVETGIDLEIRAMEKPSDHAPIWAVFK 267


>gi|325915362|ref|ZP_08177679.1| Exodeoxyribonuclease III [Xanthomonas vesicatoria ATCC 35937]
 gi|325538409|gb|EGD10088.1| Exodeoxyribonuclease III [Xanthomonas vesicatoria ATCC 35937]
          Length = 346

 Score =  195 bits (494), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 95/262 (36%), Positives = 153/262 (58%), Gaps = 5/262 (1%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64
            +AT+NVN I +R+ +L  W+    PDI+ LQE K   + FP + ++   Y +   GQ++
Sbjct: 7   KIATYNVNGIGSRLSHLLEWLTREQPDIVGLQELKATQEAFPEQAIRDAGYGVIWQGQRA 66

Query: 65  YNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +NGVA+L++   PIEI   LP D  D Q+R++EA        + +  LYLP+GNP    K
Sbjct: 67  WNGVALLARGTDPIEIRRGLPWDPSDTQSRYLEAAI----HGVVVACLYLPNGNPQPGPK 122

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +D K++W +R +R A   + L  P+   GD+N++P   D Y+P  W  DA    E RQ++
Sbjct: 123 FDYKLAWFQRLIRHAKTLVGLPHPVALIGDFNVVPTDADIYDPKGWRKDALLQPESRQAY 182

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q L   G+TD++ A +    +Y+FWDY+   +++++G+RIDH++L+      L  A +D 
Sbjct: 183 QTLVEQGWTDSLLAVYGDAPIYTFWDYFRQHFARDRGLRIDHLLLNRALAPGLLDAGVDK 242

Query: 244 KPRGWTKPSDHTPVIVSLDIPE 265
             R   K SDH P  +S+ +P+
Sbjct: 243 WVRALEKASDHAPTWISVRVPD 264


>gi|119945063|ref|YP_942743.1| exodeoxyribonuclease III [Psychromonas ingrahamii 37]
 gi|119863667|gb|ABM03144.1| Exodeoxyribonuclease III [Psychromonas ingrahamii 37]
          Length = 269

 Score =  195 bits (494), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 77/267 (28%), Positives = 123/267 (46%), Gaps = 9/267 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V ++N+N +RAR+H L A I ++ PD+I LQE K  +  FP   ++++ YH+   GQK
Sbjct: 1   MKVISFNINGLRARLHQLQAIIDKHQPDVIGLQEIKVHNDVFPVADVEAMGYHVYFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLD-VQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121
            + GVA+L K + +++    P DD +  +   +          +RI N Y P G      
Sbjct: 61  GHYGVAMLCKNKALDVQYGFPTDDEEAQRRMIMVTVQDKAGLPVRILNGYFPQGESQNHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175
           TKY  K  + +    + ++    E+ LI  GD NI     D           +      F
Sbjct: 121 TKYPAKRKFYQDLNIYLNEYHTAEDQLIVMGDINISRLDLDIGIGEVNAKRWLQTKKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R+   KL + G  D  R  +      YS++DY +  +  N+G+RID I+ +    +
Sbjct: 181 LPEEREWLAKLMDFGLIDTFRLLNPEVSDQYSWFDYRSRGFDDNRGLRIDVILATETLAN 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261
                 ID + R   KPSDH P+    
Sbjct: 241 KTIDTGIDYELRAIEKPSDHAPIWTEF 267


>gi|17546312|ref|NP_519714.1| exodeoxyribonuclease III protein [Ralstonia solanacearum GMI1000]
 gi|17428609|emb|CAD15295.1| probable exodeoxyribonuclease III protein [Ralstonia solanacearum
           GMI1000]
          Length = 269

 Score =  195 bits (494), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 94/266 (35%), Positives = 141/266 (53%), Gaps = 8/266 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPD-----IICLQETKTEDKNFPFETLQSLNYHIE 58
           + VATWNVNS++ R+ ++  W+ E   D     ++CLQE K  D  +P   L++  Y   
Sbjct: 1   MRVATWNVNSLKVRLPHVLQWLGEREADATPIDLLCLQELKLPDDRYPLAELEAAGYASL 60

Query: 59  TCGQKSYNGVAILSKYQPIEIVTH---LPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
             GQK+YNGVAIL++   +           D  D Q R + AT+ +    +R+ + Y P+
Sbjct: 61  FTGQKTYNGVAILARKAAMPEGRDVVRNIPDFADEQQRVVAATYDVAGGPVRVISAYFPN 120

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
           G  + S K   K+ W+     +    +     L+  GD+NI P   D ++P  WE     
Sbjct: 121 GQALDSDKMVYKMRWLAALQDWLQAEMAAHPRLMLLGDFNIAPDDRDVHDPKKWEGMNLV 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
           + E R +F+ L++ G  DA R       L+S+WDY   ++ +N G+RIDHI+LSP    L
Sbjct: 181 SPEERAAFRALESAGLVDAFRMFEQEDKLFSWWDYRLFAFRRNAGLRIDHILLSPNLARL 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
             S  ID  PRGW +PSDHTPV+ +L
Sbjct: 241 CESCHIDRVPRGWEQPSDHTPVVAAL 266


>gi|21231446|ref|NP_637363.1| exodeoxyribonuclease III [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66768500|ref|YP_243262.1| exodeoxyribonuclease III [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|21113117|gb|AAM41287.1| exodeoxyribonuclease III [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66573832|gb|AAY49242.1| exodeoxyribonuclease III [Xanthomonas campestris pv. campestris
           str. 8004]
          Length = 356

 Score =  195 bits (494), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 95/262 (36%), Positives = 158/262 (60%), Gaps = 5/262 (1%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64
           T+AT+NVN I +R+ +L  W++   PDI+ LQE K+  + FP + ++   Y +   GQ+S
Sbjct: 7   TIATYNVNGIASRLPHLLQWLQREQPDIVGLQELKSTQEAFPEQAIRDAGYGVIWQGQRS 66

Query: 65  YNGVAILSKY-QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +NGVA+L++  +P+EI   LP D  D Q+R++EA        + +G LYLP+GNP    K
Sbjct: 67  WNGVALLARGAEPVEIRRGLPWDPADTQSRYLEAAI----HGVIVGCLYLPNGNPQPGPK 122

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +D K+ W +R LR A+  + L  P+   GD+N++P     Y+P  W  DA    E R ++
Sbjct: 123 FDYKLKWFQRLLRHAATLVALPHPVALIGDFNVVPTDAHIYDPKGWRKDALLQPESRAAY 182

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            +L   G+TD+++A H    +Y+FWDY+   +++++G+RIDH++L+    + L  A +  
Sbjct: 183 AQLLAQGWTDSLQAIHGDAPVYTFWDYFRQHFARDRGLRIDHLLLNRTLAAGLRDAGVGK 242

Query: 244 KPRGWTKPSDHTPVIVSLDIPE 265
             R   K SDH P  +++D+P+
Sbjct: 243 WVRALEKASDHAPTWITVDVPD 264


>gi|325286008|ref|YP_004261798.1| exodeoxyribonuclease III Xth [Cellulophaga lytica DSM 7489]
 gi|324321462|gb|ADY28927.1| exodeoxyribonuclease III Xth [Cellulophaga lytica DSM 7489]
          Length = 254

 Score =  195 bits (494), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 79/263 (30%), Positives = 130/263 (49%), Gaps = 14/263 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY---HIET 59
           + + ++NVN IRA I      W+   +PD+ICLQE K   +       +   Y   +  +
Sbjct: 1   MKIVSYNVNGIRAAINKGFIDWLTATDPDVICLQEIKALKEQLDLSLFEEAGYSYNYWYS 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GVAILSK +P  +      D +D + R I A F      + I ++YLP G  +
Sbjct: 61  AQKKGYSGVAILSKTEPDNVTYGTGIDYMDFEGRNIRADFG----DISIMSMYLPSGTNL 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                D K+ ++  F ++ ++  + +  +I  GDYNI  +  D ++P+  +N + F    
Sbjct: 117 AR--LDFKLKYMDDFQKYINELKKDKPNIIVVGDYNICHEAIDIHDPVRNKNVSGFLPVE 174

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R+        GF D+ R  +   H YS+W Y A++ + NKG R+D+ M+S    + L  A
Sbjct: 175 REWIGNFMESGFIDSFRHFNKEPHNYSWWSYRANARNNNKGWRLDYGMVSKTLENRLKRA 234

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
            I  +     K SDH P++V L 
Sbjct: 235 VILKEA----KHSDHCPILVELK 253


>gi|330808554|ref|YP_004353016.1| Putative exodeoxyribonuclease III [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
 gi|327376662|gb|AEA68012.1| Putative exodeoxyribonuclease III [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
          Length = 264

 Score =  194 bits (493), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 108/262 (41%), Positives = 157/262 (59%), Gaps = 5/262 (1%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           M  + +AT+N+N IRAR+ NL  W++   PDI CLQE K  DK+FP   L+S+ Y     
Sbjct: 1   MKNLRIATFNINGIRARLPNLLEWLEREKPDIACLQELKAVDKDFPAAELESVGYGAIWH 60

Query: 61  GQKSYNGVAILSKY-QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
           GQ S+NGVAIL++  QP+E    LPG D D  +R++EA        + +G LYLP+GNP 
Sbjct: 61  GQASWNGVAILARDAQPLESRRGLPGGDDDNHSRYLEAAV----HGVLVGCLYLPNGNPQ 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K+D K++W +R + +A      + P++ AGDYN++P   D YNP  W  DA    E 
Sbjct: 117 PGPKFDYKLAWFERLIDYAQGLQASDHPVVLAGDYNVVPTDMDIYNPRSWLKDALLQPES 176

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R  + +L + G+TD++R  +    +Y+FWDY+   W KN G+RIDH++L+P A++ L  A
Sbjct: 177 RACYLRLLDQGWTDSLRHLYPDERIYTFWDYFRQHWQKNSGLRIDHLLLNPAASAYLSEA 236

Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261
            +D   R    PSDH P  + L
Sbjct: 237 GVDAWVRNQPHPSDHAPTWIRL 258


>gi|288941776|ref|YP_003444016.1| exodeoxyribonuclease III [Allochromatium vinosum DSM 180]
 gi|288897148|gb|ADC62984.1| exodeoxyribonuclease III [Allochromatium vinosum DSM 180]
          Length = 278

 Score =  194 bits (493), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 80/274 (29%), Positives = 128/274 (46%), Gaps = 11/274 (4%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           ++ + ++N+N +RAR H + A     +PDI+ LQE+K  D+ FP +  + L Y +   GQ
Sbjct: 1   MLKIVSFNINGVRARPHQVEALKAGLDPDILALQESKVADEQFPLDWARGLGYDVRIHGQ 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLD-VQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           K + GVA+LSK  P  +V  LP DD +  +   +      +   + + N Y P G     
Sbjct: 61  KGHYGVALLSKQSPHSVVKGLPNDDAEAQRRLILGQYRLADGDEVTVINGYFPQGEGRDH 120

Query: 122 T-KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDAC 174
             K+  K  +    L +       ++ ++  GD N+ P         D     +      
Sbjct: 121 PLKFPAKQQFYAGLLDYLRTAFRPDQNIVLLGDMNVAPLDLDIGIGADNAKRWLRTGKCA 180

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSK--NKGIRIDHIMLSPE 231
           F  E R+ FQ L + G  DA R  H      +S++DY +  + +    G+RIDHI++S  
Sbjct: 181 FLPEEREWFQALLDWGLIDAYRTRHPETADRFSWFDYRSRGFEREPKHGLRIDHILISAP 240

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
               L    ID   R   KPSDH PV ++LD+ +
Sbjct: 241 LRERLIDVGIDYAIRAMDKPSDHCPVWITLDLAD 274


>gi|330719976|gb|EGG98428.1| Exodeoxyribonuclease III [gamma proteobacterium IMCC2047]
          Length = 271

 Score =  194 bits (493), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 75/271 (27%), Positives = 127/271 (46%), Gaps = 11/271 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N IRARI  L A I  + PD+I LQE+K  D +FP E + ++ Y +   GQK
Sbjct: 1   MKIISFNINGIRARIPQLQAIIDHHQPDVIGLQESKVNDPDFPVEAINNMGYAVNYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLP--GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           S+ GVA+LS+ +P  I    P  G+D   +    +   +       +   +    +    
Sbjct: 61  SHYGVAMLSRMEPKAIQKGWPDDGEDAQRRMIIGQFECSDGGLITVLNGYFPQGESNKHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175
           TK+  K  +    + +        + ++  GD+NI P  +D           +      F
Sbjct: 121 TKFPAKRKFYADLMNYLETHHTPSDRVVVMGDFNISPTDNDIGIGEKNAKRWLQTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232
             E R+ + +L   G  D+ R  +   +  YS++DY +  +     +G+RIDHI+++   
Sbjct: 181 LPEEREWYDRLLAWGLLDSFRIQNPEVNDRYSWFDYRSKGFDDTPKRGLRIDHILITQPL 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              L    ID + R   KPSDH PV  SL++
Sbjct: 241 VEHLADTGIDYEARAMEKPSDHCPVWASLNL 271


>gi|119953317|ref|YP_945526.1| exodeoxyribonuclease III [Borrelia turicatae 91E135]
 gi|119862088|gb|AAX17856.1| exodeoxyribonuclease III [Borrelia turicatae 91E135]
          Length = 252

 Score =  194 bits (493), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 61/260 (23%), Positives = 106/260 (40%), Gaps = 9/260 (3%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN IRA        +I++ NPD++CLQETK   +  P E +    Y+      
Sbjct: 1   MNLISWNVNGIRAIFGKGFLEFIEKYNPDVLCLQETKAFKEQLPKELINIEGYYSYF--- 57

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
            S + +   S       V  +  ++++++    E    I      I        +     
Sbjct: 58  -SKSIIKGYSGVGLYSKVKPIKLENMNMEIFDREGRCLIAHYRDFILINAYFPNSQSLRK 116

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +   K+ ++      A+  +   + ++  GD+NI     D  NP      A F +E    
Sbjct: 117 RLPYKLEFLMSLESIANMFVTSGKNIVICGDFNIAHTEIDLANPKTSRESAGFYIEETTW 176

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
                N G+ D  R  +     Y++WDY   +  +N G RID+ +++    S +  A I 
Sbjct: 177 MDNFLNGGYVDTFRMFNMDPGNYTWWDYKTRARERNIGWRIDYFIVNEFFKSKVKDALIL 236

Query: 243 TKPRGWTKPSDHTPVIVSLD 262
            +  G    SDH PV + L 
Sbjct: 237 REVMG----SDHCPVFLELK 252


>gi|300691333|ref|YP_003752328.1| exodeoxyribonuclease III [Ralstonia solanacearum PSI07]
 gi|299078393|emb|CBJ51043.1| EXODEOXYRIBONUCLEASE III [Ralstonia solanacearum PSI07]
          Length = 269

 Score =  194 bits (493), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 92/266 (34%), Positives = 140/266 (52%), Gaps = 8/266 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPD-----IICLQETKTEDKNFPFETLQSLNYHIE 58
           + VATWNVNS++ R+ ++  W+ E   D     ++CLQE K  D  +P   L +  Y   
Sbjct: 1   MRVATWNVNSLKVRLPHVLQWLGEREADATPIDLLCLQELKLPDDRYPLAELDAAGYASL 60

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDV---QARFIEATFTINTQTLRIGNLYLPH 115
             GQK+YNGVAIL++   +     +  +       Q R + AT+ +    +R+ + Y P+
Sbjct: 61  FTGQKTYNGVAILARKAAMPEGRDVVKNIPGFADEQQRIVAATYDVAGGPVRVISAYFPN 120

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
           G  + S K   K+ W+     +    +     L+  GD+NI P   D ++P  WE     
Sbjct: 121 GQALDSDKMVYKMRWLAALQDWLKAEMAAHPRLMLLGDFNIAPDDRDVHDPKKWEGMNLV 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
           + E R +F+ L+  G  DA R       L+S+WDY   ++ +N G+RIDHI+LSP+   L
Sbjct: 181 SPEERAAFRALEGAGLVDAFRMFDQADKLFSWWDYRLFAFKRNAGLRIDHILLSPDLARL 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
             S  ID  PRGW +PSDHTPV+ +L
Sbjct: 241 CESCHIDRVPRGWEQPSDHTPVVAAL 266


>gi|51246268|ref|YP_066152.1| exodeoxyribonuclease (ExoA) [Desulfotalea psychrophila LSv54]
 gi|50877305|emb|CAG37145.1| probable exodeoxyribonuclease (ExoA) [Desulfotalea psychrophila
           LSv54]
          Length = 480

 Score =  194 bits (493), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 72/261 (27%), Positives = 113/261 (43%), Gaps = 13/261 (4%)

Query: 5   TVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETCG 61
              +WNVN IRA         ++E NPD+I LQETK + +           Y  +  +  
Sbjct: 229 RYISWNVNGIRAVEKKGFIDIVQELNPDVIGLQETKAQPEQLSESLKNIPGYTSYWYSAQ 288

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+GVA  SK++P++++  +  ++ D + R I   F  +                +  
Sbjct: 289 RKGYSGVAFYSKHEPLQVIYGIGAEEFDCEGRVITLEFADHYLATIYFPNSADQLKRLDY 348

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
                      R L    Q+LE E+ +I  GD+N+  +  D  NP     +A FT E R 
Sbjct: 349 KL------RFNRALLAFFQKLEKEKAVILCGDFNVAHKEIDLKNPKSNVKNAGFTPEERA 402

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
              +    G+TD  R  +     YS+W Y   + SKN G RID+  +S      + +A I
Sbjct: 403 WMDEFLEAGYTDTFRLFNQDPENYSWWSYRFSARSKNIGWRIDYFCVSENGQKRIVNAEI 462

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
             +  G    SDH PV++   
Sbjct: 463 LPEVMG----SDHCPVLLDFK 479


>gi|21242774|ref|NP_642356.1| exodeoxyribonuclease III [Xanthomonas axonopodis pv. citri str.
           306]
 gi|21108255|gb|AAM36892.1| exodeoxyribonuclease III [Xanthomonas axonopodis pv. citri str.
           306]
          Length = 330

 Score =  194 bits (493), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 97/276 (35%), Positives = 160/276 (57%), Gaps = 5/276 (1%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64
            +AT+NVN I +R+ +L  W++ + PDI+ LQE K+    FP + ++   Y +   G+KS
Sbjct: 7   KIATFNVNGIASRLPHLLEWLQRDQPDIVGLQELKSTQVAFPEQAIRDAGYGVIWQGEKS 66

Query: 65  YNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +NGVA+L++  +P+EI   LP D  D Q+R++EA        + +  LYLP+GNP    K
Sbjct: 67  WNGVALLARGIEPVEIRRGLPWDPRDTQSRYLEAAI----HGVVVACLYLPNGNPQPGPK 122

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +D K++W +R +R A   ++L  P+   GD+N++P   D Y+P  W  DA    E R ++
Sbjct: 123 FDYKLAWFERLIRHAKTLVDLPHPVALIGDFNVVPTDADIYDPKGWRKDALLQPESRAAY 182

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q L   G+TD++ A H    +Y+FWDY+   +++++G+RIDH++L+      L  A +D 
Sbjct: 183 QTLLAQGWTDSLLAIHGQTPIYTFWDYFRQHFARDRGLRIDHLLLNRTLAPGLQDAGVDK 242

Query: 244 KPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMK 279
             R   K SDH P  +S+ +P+   +    T+   K
Sbjct: 243 WVRALEKASDHAPTWISVRVPDAPAEAAPDTTPMAK 278


>gi|291546831|emb|CBL19939.1| exodeoxyribonuclease III [Ruminococcus sp. SR1/5]
          Length = 251

 Score =  194 bits (492), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 71/262 (27%), Positives = 109/262 (41%), Gaps = 13/262 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN IRA I         E + DI CLQETK +      E L   + +     +
Sbjct: 1   MKFISWNVNGIRACITKGFEERFHELDADIFCLQETKCQQGQVKLE-LPGYHQYWNYANR 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           + Y+G AI +K +P+     +  ++ D + R I   F                   +   
Sbjct: 60  RGYSGTAIFTKREPLSAAYGIGIEEHDKEGRVITLEFDEYYFVTVYTPNSQSELRRLEYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +        +L+ ++P+I  GD N+  Q  D  NP     +A FT E R  
Sbjct: 120 M------KWEEDFLAYLLKLQEKKPVICCGDLNVAHQEIDLKNPKTNRKNAGFTDEERAC 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +    GF D  R  +     +YS+W Y   +  KN G RID+ ++SP     L  A+I
Sbjct: 174 FTRALESGFIDTFRYFYPDKEGVYSWWSYRFRAREKNAGWRIDYFLVSPSLKEKLQDAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
             +  G    SDH PV + +D+
Sbjct: 234 HGEIMG----SDHCPVELDIDL 251


>gi|315303668|ref|ZP_07874193.1| exodeoxyribonuclease III [Listeria ivanovii FSL F6-596]
 gi|313627958|gb|EFR96566.1| exodeoxyribonuclease III [Listeria ivanovii FSL F6-596]
          Length = 251

 Score =  194 bits (492), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 65/262 (24%), Positives = 110/262 (41%), Gaps = 13/262 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      +    + DI CLQETK +      + L     +     +
Sbjct: 1   MKLISWNVNGLRAVVKKGFLEYFDSVDADIFCLQETKLQAGQIDLD-LPGYKDYWNYAVK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +P+ +   L  ++ D + R I   F                   +   
Sbjct: 60  KGYSGTAIFTKKEPLSVQYGLGIEEHDTEGRVITLEFENFFMVTVYTPNSQAELKRLDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +  +    ++L+  +P+I  GD N+  +  D  NP     +A F+ E R  
Sbjct: 120 M------TFEDAILAYVKKLDETKPVILCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F      GF D+ R  +      YS+W Y  ++ ++N G RID+ ++S      L  A+I
Sbjct: 174 FTAFLEAGFVDSFRYFYPDLEDAYSWWSYRMNARARNTGWRIDYFVVSERLKDNLVDAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
                G    SDH PV + L++
Sbjct: 234 HPDVLG----SDHCPVELELNV 251


>gi|146298594|ref|YP_001193185.1| exodeoxyribonuclease III Xth [Flavobacterium johnsoniae UW101]
 gi|146153012|gb|ABQ03866.1| exodeoxyribonuclease III Xth [Flavobacterium johnsoniae UW101]
          Length = 253

 Score =  194 bits (492), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 81/263 (30%), Positives = 124/263 (47%), Gaps = 14/263 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY---HIET 59
           + + ++NVN IRA I      W++  +PD+ICLQE K      P E + +  Y   +   
Sbjct: 1   MKIISYNVNGIRAAITKGFIEWLQAASPDVICLQEIKATQDQIPVEAITAAGYPYQYYYP 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GVAILSK +P ++V       +D + R + A F      + + +LYLP G  I
Sbjct: 61  ATKKGYSGVAILSKIEPQKVVYGTGIHHMDFEGRNLRADFD----DVSVMSLYLPSGTNI 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                D K  ++  F  + ++       LI  GDYNI  +  D ++P+  +  + F  E 
Sbjct: 117 DR--LDHKFMFMDDFQTYINELKISIPNLIICGDYNICHEAIDIHDPVRNKTVSGFLPEE 174

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R         GF D+ R  +   H YS+W Y A +   NKG RID+ ++S      L  A
Sbjct: 175 RAWLDAFMKSGFIDSFRHFNKDPHHYSWWSYRAGARGNNKGWRIDYNLVSNAIEHRLKRA 234

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
            I          SDH PV+V ++
Sbjct: 235 VILPDA----VHSDHCPVLVEIE 253


>gi|190571508|ref|YP_001975866.1| exodeoxyribonuclease III [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|213018910|ref|ZP_03334718.1| exodeoxyribonuclease III [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|190357780|emb|CAQ55235.1| exodeoxyribonuclease III [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|212995861|gb|EEB56501.1| exodeoxyribonuclease III [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 260

 Score =  194 bits (492), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 88/260 (33%), Positives = 146/260 (56%), Gaps = 1/260 (0%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           ++ +ATWNVNSIR RI+ L ++I ++  DI+ LQE K  ++ FP+  ++ L Y     GQ
Sbjct: 1   MLKIATWNVNSIRKRINQLCSFIVDSQIDIVLLQEIKCTEEQFPYAEIEKLGYEYAVYGQ 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
            + NGV +LSKY  +E +  +   +   +AR+IE     +   +R+G++Y+P+G    S 
Sbjct: 61  VARNGVCVLSKYPILEKLK-IDIVESHQEARYIECVIKHSNNKVRVGSVYVPNGQSPDSH 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
            ++ K+ +           L+ EE  I AGDYN+     D ++  +     CF ++ R+ 
Sbjct: 120 TFEYKLKFFDNLYERMGTLLKNEELTIIAGDYNVALDEIDVFDSNLLNGQVCFHIKEREK 179

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
            + + N+GF DA R +H     +++W Y  +S   N+G+RIDH++LSP+A   L +  ID
Sbjct: 180 LRAILNLGFKDAFRISHLNLQQFTWWHYQGNSLRNNQGMRIDHMLLSPQAADKLETCYID 239

Query: 243 TKPRGWTKPSDHTPVIVSLD 262
            + R    PSDHTPV+  + 
Sbjct: 240 DRLRKLENPSDHTPVVCVIK 259


>gi|301062581|ref|ZP_07203216.1| exodeoxyribonuclease III [delta proteobacterium NaphS2]
 gi|300443317|gb|EFK07447.1| exodeoxyribonuclease III [delta proteobacterium NaphS2]
          Length = 256

 Score =  194 bits (492), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 82/261 (31%), Positives = 130/261 (49%), Gaps = 6/261 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +  AT+N NS+RAR+  L  W++   PD++C+QETK +DK+FP +  +   YH    GQK
Sbjct: 1   MKFATFNANSLRARLPILLDWLEREEPDVLCIQETKVQDKDFPVKPFEGAGYHAAFKGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           SYNGVAI+SK        +L  +  +           I    + +     P G  + + K
Sbjct: 61  SYNGVAIVSKSPLEAPRLNLFDEGDEQARFISGIIGGIPIVNVYV-----PQGFQVGTEK 115

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ W+K      + R + + PL+ AGD+N+     D Y+P  + +   F  E +   
Sbjct: 116 FQYKLGWLKSLYDHIAGRYDPDAPLLVAGDFNVALDDRDVYDPDGFRDGVGFHPEEQALM 175

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYY-ADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           +     G  D  R        Y+FWDY   + + +N G RID+I+ +   T    +  ID
Sbjct: 176 KMFFQWGLVDIFRQHVSEPQQYTFWDYRIPNGFKRNMGWRIDYILGTKPLTEKSTAIWID 235

Query: 243 TKPRGWTKPSDHTPVIVSLDI 263
            + RG  KPSDHT +++SL +
Sbjct: 236 NQSRGLKKPSDHTFLVMSLAV 256


>gi|289665987|ref|ZP_06487568.1| exodeoxyribonuclease III [Xanthomonas campestris pv. vasculorum
           NCPPB702]
 gi|289670449|ref|ZP_06491524.1| exodeoxyribonuclease III [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 329

 Score =  194 bits (492), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 95/267 (35%), Positives = 157/267 (58%), Gaps = 5/267 (1%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64
            +AT+NVN I +R+ +L  W++   PDI+ LQE K+    FP + ++   Y +   G+KS
Sbjct: 7   KIATFNVNGITSRLSHLLEWLQREQPDIVGLQELKSTQAAFPEQAIRDAGYGVIWQGEKS 66

Query: 65  YNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +NGVA+L++  +P+EI   LP D  D Q+R++EA        + +  LYLP+GNP    K
Sbjct: 67  WNGVALLARGTEPVEIRRGLPWDPGDTQSRYLEAAI----HGVVVACLYLPNGNPQPGPK 122

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +D K++W +R +R A   ++L  P+   GD+N++P   D Y+P  W  DA    E R ++
Sbjct: 123 FDYKLAWFERLIRHAKTLVDLPHPVALIGDFNVVPTDADIYDPKGWRKDALLQPESRAAY 182

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           Q L   G+TD++ A H    +Y+FWDY+   +++++G+RIDH++L+ +    L  A ++ 
Sbjct: 183 QTLLAQGWTDSLLAMHGATPIYTFWDYFRQHFARDRGLRIDHLLLNRKLAPGLQDAGVNK 242

Query: 244 KPRGWTKPSDHTPVIVSLDIPEPRKKQ 270
             R   K SDH P  +S+ +P+   K 
Sbjct: 243 WVRALEKASDHAPTWISVHVPDAPGKA 269


>gi|154502978|ref|ZP_02040038.1| hypothetical protein RUMGNA_00800 [Ruminococcus gnavus ATCC 29149]
 gi|153796517|gb|EDN78937.1| hypothetical protein RUMGNA_00800 [Ruminococcus gnavus ATCC 29149]
          Length = 250

 Score =  194 bits (492), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 77/261 (29%), Positives = 123/261 (47%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN IRA +      + +E + DI CLQETK +      + L+    +     +
Sbjct: 1   MKLISWNVNGIRACVQKGFLEFFREADADIFCLQETKLQAGQIELD-LEGYEQYWNYAVK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G A+ +K +P+ +   +  ++ D + R I   F           +Y P+     + 
Sbjct: 60  KGYSGTAVFTKKKPLNVTYGIGIEEHDQEGRVITLEFE----EFYFVTVYTPNSQNELAR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
             D ++ W   FL +  + LE E+P+IF GD N+  +  D  NP     +A FT E R  
Sbjct: 116 -LDYRMKWESDFLAYLKK-LEEEKPVIFCGDLNVAHKEIDLKNPKTNRKNAGFTDEERGK 173

Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F ++ N GF D  R  +     +YS+W Y   + +KN G RID+  +S      L  A+I
Sbjct: 174 FTEMLNAGFIDTFRYFYPDQEGIYSWWSYRFSARAKNAGWRIDYFCVSECLKDRLADAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            T   G    SDH P+ + L 
Sbjct: 234 LTDVMG----SDHCPIELDLK 250


>gi|189466093|ref|ZP_03014878.1| hypothetical protein BACINT_02463 [Bacteroides intestinalis DSM
           17393]
 gi|189434357|gb|EDV03342.1| hypothetical protein BACINT_02463 [Bacteroides intestinalis DSM
           17393]
          Length = 254

 Score =  194 bits (492), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 81/262 (30%), Positives = 138/262 (52%), Gaps = 12/262 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60
           + + T+NVN +RA +   L  W+++   D++C+QETK +   +P E L +L Y  ++ + 
Sbjct: 1   MKIITYNVNGLRAAVGKGLPEWLEQEQADVVCIQETKLQPDQYPEEALSALGYKHYLYSA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GVAIL+K +P  +   +  ++ D + RFI A F      + + ++Y P G    
Sbjct: 61  QKKGYSGVAILTKREPDHVEYGMGMEEYDNEGRFIRADFG----DISVVSVYHPSG-TSG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   K+ W+++F  + +   +    LI  GDYNI  +P D ++PI    ++ F  E R
Sbjct: 116 DERQAFKMVWLEKFQEYVTGLRKSRPKLILCGDYNICHEPIDIHDPIRNATNSGFLPEER 175

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           +   +  N GF D  R  H     Y++W Y  +S +KNKG RID+ M++     LL  AR
Sbjct: 176 EWMTRFLNAGFIDTFRLLHPEQQEYTWWSYRFNSRAKNKGWRIDYCMVTELVRPLLREAR 235

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I          SDH P+++ ++
Sbjct: 236 ILNDA----VHSDHCPMLLDIE 253


>gi|282163799|ref|YP_003356184.1| exodeoxyribonuclease [Methanocella paludicola SANAE]
 gi|282156113|dbj|BAI61201.1| exodeoxyribonuclease [Methanocella paludicola SANAE]
          Length = 255

 Score =  194 bits (492), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 57/261 (21%), Positives = 100/261 (38%), Gaps = 7/261 (2%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + +  WNVN +RA +      W++  + DI+C+QETK   +  P E      YH  +   
Sbjct: 1   MRMLCWNVNGLRAVLKKGFVDWLRREDADIVCIQETKAAAEQMPPEVTGIPGYHFYSTSP 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
               G + ++ +   E  +   G  ++              + + +   +      ++  
Sbjct: 61  LEKKGYSGVALFTKEEPKSVSYGFGIEKYDIEGRTIIADYGKFVLLSIYFPN--GKMSQE 118

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           + D K+ +   FL +  +       ++  GD N      D   P      + F    R+ 
Sbjct: 119 RLDYKMGFYDAFLDYVDKLKAEGRKVVVCGDVNTAHTELDIARPKENSKKSGFLPMEREW 178

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
             K +  GF D  R        Y++WD +  +  +N G RID+  +S      L  A I+
Sbjct: 179 MDKFEAHGFIDTFRVFEKAGGHYTYWDTFTKARERNVGWRIDYFYVSDNLKKNLKGAFIE 238

Query: 243 TKPRGWTKPSDHTPVIVSLDI 263
               G    SDH PV + L I
Sbjct: 239 PDVMG----SDHCPVGIDLKI 255


>gi|83745850|ref|ZP_00942907.1| Exodeoxyribonuclease III [Ralstonia solanacearum UW551]
 gi|83727540|gb|EAP74661.1| Exodeoxyribonuclease III [Ralstonia solanacearum UW551]
          Length = 318

 Score =  194 bits (492), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 92/266 (34%), Positives = 141/266 (53%), Gaps = 8/266 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPD-----IICLQETKTEDKNFPFETLQSLNYHIE 58
           + VATWNVNS++ R+ ++  W+ E   D     ++CLQE K  D  +P   L +  Y   
Sbjct: 50  MRVATWNVNSLKVRLPHVLQWLGEREADATPIDLLCLQELKLPDDRYPLAELDAAGYASL 109

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDV---QARFIEATFTINTQTLRIGNLYLPH 115
             GQK+YNGVAIL++   +     +  +       Q R + AT+ +    +R+ + Y P+
Sbjct: 110 FTGQKTYNGVAILARKAAMPEGRDVIKNIPGFADEQQRIVAATYDVAGGPVRVISAYFPN 169

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
           G  + S K   K+ W+     +    ++    L+  GD+NI P   D ++P  WE     
Sbjct: 170 GQALDSDKMVYKMRWLAALQDWLKTEMDAHPRLMLLGDFNIAPDDRDVHDPKKWEGMNLV 229

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
           + E R +F+ L++ G  DA R       L+S+WDY   ++ +N G+RIDHI+LSPE    
Sbjct: 230 SPEERAAFRALESAGLVDAFRMFEQADKLFSWWDYRLFAFKRNAGLRIDHILLSPELAQR 289

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
             S  ID  PRGW +PSDHTPV+ +L
Sbjct: 290 CESCHIDRVPRGWEQPSDHTPVVAAL 315


>gi|116493341|ref|YP_805076.1| exonuclease III [Pediococcus pentosaceus ATCC 25745]
 gi|116103491|gb|ABJ68634.1| Exonuclease III [Pediococcus pentosaceus ATCC 25745]
          Length = 251

 Score =  194 bits (492), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 79/262 (30%), Positives = 117/262 (44%), Gaps = 13/262 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +        KE + DI C+QETK ++     E      Y      +
Sbjct: 1   MKLISWNVNGLRAAVKHGFLDVFKELDADIFCIQETKLQEGQIELELPHYYQY-WNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +P+ +   L  ++ D + R I   F        +   Y P+  P    
Sbjct: 60  KGYSGTAIFTKKKPLAVRYGLGIEEHDQEGRIITLEFE----KFYVITCYTPNSQPKLKR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
              +         R    +L   +P+IF GD N+  Q  D  N      +A FT E R  
Sbjct: 116 L--EYRMAWDDAFRAYIDQLNQHKPVIFCGDLNVAHQEIDLKNDKTNHKNAGFTDEERNK 173

Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L N GFTD  R  +     +YS+W Y  ++ + N G RID+ + S      L  A+I
Sbjct: 174 FTQLLNSGFTDTYRYFYPSKEGVYSWWSYRFNARANNAGWRIDYFVSSKALDQKLTDAQI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
            T+  G    SDH PV + LDI
Sbjct: 234 HTEIFG----SDHCPVELDLDI 251


>gi|256822174|ref|YP_003146137.1| exodeoxyribonuclease III [Kangiella koreensis DSM 16069]
 gi|256795713|gb|ACV26369.1| exodeoxyribonuclease III [Kangiella koreensis DSM 16069]
          Length = 271

 Score =  194 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 81/269 (30%), Positives = 123/269 (45%), Gaps = 9/269 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + T+N+NS+R R H + A +++++PDIICLQETK  D  FPFE    L YHIE  G K
Sbjct: 1   MKIVTFNINSVRTRPHQIEALVEKHDPDIICLQETKVHDDAFPFELYADLGYHIEIHGGK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           ++ GVA  SK +P+ +      D  D Q R I  T+    +T+++ N Y P G       
Sbjct: 61  AHYGVATFSKQKPLTVEKGFATDPEDAQRRMIITTYQFGNETIKVLNGYFPQGENREHPV 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACFTL 177
                      L    Q  + +   I  GD NI P+              + E    F  
Sbjct: 121 KFPYKQKFYADLLSYLQNDQGDHRTIVLGDINISPEDIDIGIGEPNRKRWLREGKCSFLP 180

Query: 178 EVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKN--KGIRIDHIMLSPEATS 234
           E R+  QK+   G  D  R  +      +S++DY +  + +   +G+RID +        
Sbjct: 181 EEREWLQKILATGLYDTYRTINPDVDDKFSWFDYRSRGFEREPRRGLRIDSVFACDWLNE 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              ++ ID + R   +PSDH PV    D+
Sbjct: 241 RAVASDIDYEIRSMERPSDHAPVWTEFDL 269


>gi|309389686|gb|ADO77566.1| exodeoxyribonuclease III Xth [Halanaerobium praevalens DSM 2228]
          Length = 258

 Score =  194 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 73/267 (27%), Positives = 125/267 (46%), Gaps = 12/267 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN IRA        WI    PDI+ LQE + +D     +     NY+      
Sbjct: 1   MRIYSWNVNGIRAVKKKGFLDWINNEQPDILGLQEIRIQDHQLKDDLRDLDNYYSYFNFG 60

Query: 63  KS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           +   Y+GVA+ +K +P+ + + +     D + R I A F        + N+Y P+G   +
Sbjct: 61  QKKGYSGVALYTKIEPLNVWSGIGIKRFDYEGRVIGAEFE----DFYLLNIYFPNGR-SS 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             + + K+ +    L ++    +  + ++  GDYN    P D ++P   +  + F    R
Sbjct: 116 KKRLNYKLDFYDAILDYSENLRKKGKEVVICGDYNTAHHPIDLHDPASNKKTSGFMPIER 175

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           +   KL+  G+ D+ R  +     YS+W Y   + S+N G RID+  +S    S L +A 
Sbjct: 176 EWLDKLEEKGYLDSYRYFNPEKECYSWWSYRTKARSRNAGWRIDYHFVSAGLESKLINAD 235

Query: 241 IDTKPRGWTKPSDHTPVIVSLDIPEPR 267
           I T+  G    SDH PV ++L + E +
Sbjct: 236 ILTEVMG----SDHCPVTITLALDEKK 258


>gi|289641553|ref|ZP_06473715.1| exodeoxyribonuclease III Xth [Frankia symbiont of Datisca
           glomerata]
 gi|289508648|gb|EFD29585.1| exodeoxyribonuclease III Xth [Frankia symbiont of Datisca
           glomerata]
          Length = 425

 Score =  194 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 82/262 (31%), Positives = 125/262 (47%), Gaps = 6/262 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFP---FETLQSLNYHIETC 60
           V VATWN+NS +AR   L  W+    PD++CLQETK  D  F     E L    Y +   
Sbjct: 82  VRVATWNINSAKARQARLIEWLDRAQPDVVCLQETKLSDAAFLELFDEDLFRRGYRVAHH 141

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           G   +NGVAI S+    ++   L                T     +RI +LY+P+G  + 
Sbjct: 142 GDGRWNGVAIFSRAGLDDVEAGLADGPGFPAPEPRALAATCGG--IRIWSLYVPNGRAVD 199

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
              Y  K++W+        + L    P+I  GD+NI P   D ++P  +      T   R
Sbjct: 200 DPHYAYKLTWLAALRASVEKALTT-APVIACGDFNIAPTDADVWDPAAFAGATHVTDAER 258

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           ++ ++L ++G  D +R       ++++WDY A  + KN G+RID ++ S      + +  
Sbjct: 259 RALRELTDLGLVDVMRRRWPDEQVFTYWDYRALMFPKNMGMRIDLLLASDSLVDRVRAVW 318

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           +D + R  T  SDH PVIV LD
Sbjct: 319 VDRQARKGTGTSDHAPVIVDLD 340


>gi|302343712|ref|YP_003808241.1| exodeoxyribonuclease III [Desulfarculus baarsii DSM 2075]
 gi|301640325|gb|ADK85647.1| exodeoxyribonuclease III [Desulfarculus baarsii DSM 2075]
          Length = 259

 Score =  194 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 88/258 (34%), Positives = 131/258 (50%), Gaps = 5/258 (1%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64
           T+A++NVN +RAR+  L  W+  N PD +CLQETK +D++FP + ++ L YH+   GQKS
Sbjct: 4   TIASFNVNGLRARLGILGDWLAHNQPDAVCLQETKVQDQDFPRQAVEELGYHVAFHGQKS 63

Query: 65  YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124
           YNGVAILSK    E          D QAR + A        L + N+Y P G   +   +
Sbjct: 64  YNGVAILSKRPADEHGHGFGELWDDDQARLLWAKLDG----LWVINVYAPQGRDPSDPAF 119

Query: 125 DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ 184
             K+ + +R   +   R    E L+  GD+N+ PQ  D ++P+          + R ++ 
Sbjct: 120 AYKLEFFRRLRAWLEARFSPGEALVCCGDFNVAPQDIDLHDPVKLAGQVGCHPDERAAYA 179

Query: 185 KLQNMGFTDAIRATHDTHHLYSFWDYY-ADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            + + G  D  R  H     ++FWDY    + S++ G RIDHI+ S           +D 
Sbjct: 180 NVLDWGLEDVFRRLHPAQKQFTFWDYRLRGALSRDLGWRIDHILASAGLAPACGQCLVDM 239

Query: 244 KPRGWTKPSDHTPVIVSL 261
            PR   KPSDHTP++   
Sbjct: 240 APRRLEKPSDHTPILARF 257


>gi|187918395|ref|YP_001883958.1| exodeoxyribonuclease III [Borrelia hermsii DAH]
 gi|119861243|gb|AAX17038.1| exodeoxyribonuclease III [Borrelia hermsii DAH]
          Length = 253

 Score =  194 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 68/262 (25%), Positives = 109/262 (41%), Gaps = 13/262 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC-- 60
           + + +WNVN IRA        +I++ NPDI+CLQETK   +  P E +    Y+      
Sbjct: 1   MNLISWNVNGIRAVFGKGFFEFIEKYNPDILCLQETKACKEQLPKELISIEGYYSYFSKS 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
             K Y+GVA+ SK +PI++                E    I      I        +   
Sbjct: 61  IIKGYSGVALYSKIEPIKLENMRMEIFD------REGRCLIAHYRDFILINAYFPNSQAL 114

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             + + K+ ++      A+  +   + ++  GD+NI     D  NP      A F +E  
Sbjct: 115 RKRLNYKLEFLMSLESIANSFVTAGKNVVICGDFNIAHTEIDLSNPKSSRESAGFYIEET 174

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
                  N G+ D  R  +     Y++WDY   +  +N G RID+ +++    S +  A 
Sbjct: 175 TWMDNFLNGGYVDTFRMFNGEPGNYTWWDYRTRARERNIGWRIDYFLVNKVFKSEVRDAL 234

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I  +  G    SDH PV + L 
Sbjct: 235 ILNEVMG----SDHCPVFLELK 252


>gi|84625943|ref|YP_453315.1| exodeoxyribonuclease III [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|84369883|dbj|BAE71041.1| exodeoxyribonuclease III [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 259

 Score =  194 bits (492), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 87/259 (33%), Positives = 135/259 (52%), Gaps = 6/259 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A+WNVNS+  R+ +L  W+    PD++ +QETK ED  FP   L  L Y    CGQK
Sbjct: 1   MKIASWNVNSLNVRLPHLQQWLTAFAPDVVGIQETKLEDHRFPDAALAELGYRSVFCGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAILS+   +++   +PG D   Q              +RI NLY+ +G  + + K
Sbjct: 61  TYNGVAILSRSPALDVQMGIPGFDDVQQRVIAATVDG-----VRIINLYVVNGQDVGTDK 115

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN-PIIWENDACFTLEVRQS 182
           Y  K+ W+     + +Q L+    L+  GD+NI P   D ++  +  E+    + + R +
Sbjct: 116 YAYKLRWLAAAHDWIAQELQTYPQLVVLGDFNIAPDARDVHDATVWNEHHILTSTDERAA 175

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
            +KL  +G  DA R        +S+WDY    + +N G+RID  ++S    +    + ID
Sbjct: 176 LEKLLALGLHDAFRLHTQDAEHFSWWDYRQAGFRRNLGLRIDLTLVSDALRTRAVESGID 235

Query: 243 TKPRGWTKPSDHTPVIVSL 261
            +PR W +PSDH P  V L
Sbjct: 236 REPRTWERPSDHAPAWVRL 254


>gi|325281386|ref|YP_004253928.1| exodeoxyribonuclease III Xth [Odoribacter splanchnicus DSM 20712]
 gi|324313195|gb|ADY33748.1| exodeoxyribonuclease III Xth [Odoribacter splanchnicus DSM 20712]
          Length = 257

 Score =  193 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 84/265 (31%), Positives = 134/265 (50%), Gaps = 13/265 (4%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59
           ++ + T+NVN +R+ +      W+ E  PDI+CLQETK +    P    ++L Y     +
Sbjct: 1   MIKIITYNVNGLRSALSKGFTDWLAEELPDIVCLQETKAQPDQIPTLEFEALGYRSFFFS 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GVAIL++  P  +   +   + D + RF+ A +      L I ++Y P G   
Sbjct: 61  AEKKGYSGVAILTRITPDHLEYGMGMQEYDREGRFLRADYG----DLSIVSVYHPSG-TT 115

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +   K+ W++ F  +  +  +  + LI  GDYNI  +P D ++P+   N + F  E 
Sbjct: 116 GEERQAFKMKWLEDFRHYVMKLSKTRKKLILCGDYNICHRPIDIHDPVRNANSSGFLPEE 175

Query: 180 RQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R+        GFTD  R  H    H Y++W + A++ + NKG RID+ M+SPE   LL  
Sbjct: 176 REWMSLFLESGFTDTFRYFHPEEPHQYTWWSFRANARNNNKGWRIDYCMVSPEVIPLLKD 235

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263
           A I  +     K SDH P +V L +
Sbjct: 236 AYILPQV----KHSDHCPAVVELKV 256


>gi|319943026|ref|ZP_08017309.1| exodeoxyribonuclease III [Lautropia mirabilis ATCC 51599]
 gi|319743568|gb|EFV95972.1| exodeoxyribonuclease III [Lautropia mirabilis ATCC 51599]
          Length = 268

 Score =  193 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 87/262 (33%), Positives = 136/262 (51%), Gaps = 5/262 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS++ R+ ++  W+  N  D +CLQETK  D  FP + +++  Y +   GQ 
Sbjct: 1   MQLATWNVNSLKMRLQHVLDWLAANPVDFLCLQETKLTDDKFPKDEIEAAGYGVIFTGQP 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIE---ATFTINTQTLRIGNLYLPHGNPIT 120
           +YNGVA+L + +   +   +  ++   +        A F      +R+   Y P+G  + 
Sbjct: 61  TYNGVALLYRKEAGYVPDGVQLNNPLYEDVQRRLVSARFQTAAGPVRVIGAYFPNGQAVG 120

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPL--IFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
           S KY  K+ WI     + +Q    E     I AGD+NI P   D ++P +W +    +  
Sbjct: 121 SEKYVYKLGWIASLQEWIAQLRREEPDTGVILAGDFNIAPADADVHDPAVWADGILVSGP 180

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
            R++ Q L  +G  DA R       L+S+WDY A  + +N G+RID I++S E   ++  
Sbjct: 181 EREALQGLLALGLHDAFRLFEQPPKLFSWWDYRALGFRRNAGLRIDLILVSDELKPMVGR 240

Query: 239 ARIDTKPRGWTKPSDHTPVIVS 260
             ID  PR   KPSDHTPV+V 
Sbjct: 241 CWIDKGPRKLEKPSDHTPVVVE 262


>gi|88657831|ref|YP_507482.1| exodeoxyribonuclease III [Ehrlichia chaffeensis str. Arkansas]
 gi|88599288|gb|ABD44757.1| exodeoxyribonuclease III [Ehrlichia chaffeensis str. Arkansas]
          Length = 281

 Score =  193 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 99/280 (35%), Positives = 153/280 (54%), Gaps = 17/280 (6%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
            + +ATWNVNSIR R+ +L  W+  +  DI  LQE K  D+ FPF  ++SL Y     GQ
Sbjct: 2   TLKIATWNVNSIRKRLDHLCNWLINSAIDIALLQEIKCTDEQFPFFDVESLGYKCYVHGQ 61

Query: 63  KSYNGVAILSKYQPI-----------------EIVTHLPGDDLDVQARFIEATFTINTQT 105
           K+ NGVAI+++Y  +                   ++         ++R++E     +   
Sbjct: 62  KARNGVAIITRYPIVGELVTSIFSSDYKSKLCYELSSENFIYNCDESRYLECVVLHHNIK 121

Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165
           +RI ++Y+P+G  I S  +  K+ +  +    A   L+ EE LI  GDYN+ P P D Y+
Sbjct: 122 IRIASIYVPNGQSIDSDAFQYKLGFFDQLREHALSLLKKEEILILGGDYNVAPYPIDVYD 181

Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225
           P + +   CF    R+ F+ + N+GFTD+ R  +D    +S+W+Y A +W +N+G+RID+
Sbjct: 182 PEVMDGKLCFHKSEREKFRSILNLGFTDSFRVLNDYEKKFSWWNYKAGAWQQNRGLRIDN 241

Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           ++LSP+AT  L S  I  K RG   PSDH PV+  LD+  
Sbjct: 242 LLLSPQATDKLLSCVIHDKLRGLDTPSDHAPVVCELDLSS 281


>gi|255325807|ref|ZP_05366899.1| exodeoxyribonuclease III [Corynebacterium tuberculostearicum SK141]
 gi|311740107|ref|ZP_07713940.1| exodeoxyribonuclease III [Corynebacterium pseudogenitalium ATCC
           33035]
 gi|255297019|gb|EET76344.1| exodeoxyribonuclease III [Corynebacterium tuberculostearicum SK141]
 gi|311304803|gb|EFQ80873.1| exodeoxyribonuclease III [Corynebacterium pseudogenitalium ATCC
           33035]
          Length = 269

 Score =  193 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 77/267 (28%), Positives = 132/267 (49%), Gaps = 8/267 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+NS+R R       I +++ D++CLQETK +D  FP E  +    H+   G  
Sbjct: 1   MRIATWNINSVRTRTQRALNLISKHDIDVLCLQETKVKDDKFPREVFEDAGLHVTCHGLN 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT-----QTLRIGNLYLPHGNP 118
            +NGVAI+SK +P ++    PG     +                 + + I +LY+P+G  
Sbjct: 61  QWNGVAIVSKEEPEDVFIGFPGQPGFAKDPEKPQDREARALGARIRGVEIWSLYVPNGRE 120

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
           IT   YD K+ ++    R+A    + +  L+ +GD+NI P+  D ++   +      T  
Sbjct: 121 ITDRHYDYKLDFLYHLARYAENHAQSK--LLMSGDFNIAPRDEDVWDIEAFRGKTHVTEP 178

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
            R +FQ L+  G  +  R   +    Y+++DY    + KN+G+RID  + S      +  
Sbjct: 179 ERAAFQMLEEAGLEEVTRRFTE-DQRYTYFDYKGMRFQKNEGMRIDFQLASAPLAQHVTG 237

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           A++D   R   K SDH P++   ++P+
Sbjct: 238 AQVDMVERAGDKTSDHCPLLADYNLPD 264


>gi|68171888|ref|ZP_00545213.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Ehrlichia
           chaffeensis str. Sapulpa]
 gi|67998687|gb|EAM85414.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Ehrlichia
           chaffeensis str. Sapulpa]
          Length = 281

 Score =  193 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 98/280 (35%), Positives = 152/280 (54%), Gaps = 17/280 (6%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
            + +ATWNVNSIR R+ +L  W+  +  DI  LQE K  D+ FPF  ++SL Y     GQ
Sbjct: 2   TLKIATWNVNSIRKRLDHLCNWLINSAIDIALLQEIKCTDEQFPFFDVESLGYKCYVHGQ 61

Query: 63  KSYNGVAILSKYQPI-----------------EIVTHLPGDDLDVQARFIEATFTINTQT 105
           K+ NGVAI+++Y  +                   ++         ++R++E     +   
Sbjct: 62  KARNGVAIITRYPIVGELVTSIFSSDYKSKLCYELSSENFIYNCDESRYLECVVLHHNIK 121

Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165
           +RI ++Y+P+G  I S  +  K+ +  +        L+ EE LI  GDYN+ P P D Y+
Sbjct: 122 IRIASIYVPNGQSIDSDAFQYKLGFFDQLREHVLSLLKKEEILILGGDYNVAPYPIDVYD 181

Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225
           P + +   CF    R+ F+ + N+GFTD+ R  +D    +S+W+Y A +W +N+G+RID+
Sbjct: 182 PEVMDGKLCFHKSEREKFRSILNLGFTDSFRVLNDYEKKFSWWNYKAGAWQQNRGLRIDN 241

Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           ++LSP+AT  L S  I  K RG   PSDH PV+  LD+  
Sbjct: 242 LLLSPQATDKLLSCVIHDKLRGLDTPSDHAPVVCELDLSS 281


>gi|116749760|ref|YP_846447.1| exodeoxyribonuclease III Xth [Syntrophobacter fumaroxidans MPOB]
 gi|116698824|gb|ABK18012.1| Exodeoxyribonuclease III [Syntrophobacter fumaroxidans MPOB]
          Length = 265

 Score =  193 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 80/260 (30%), Positives = 127/260 (48%), Gaps = 5/260 (1%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64
            VAT+NVN IR+R+  +  W+  + PD +CLQE K ++ +FP +  +   Y     GQK+
Sbjct: 4   KVATFNVNGIRSRMAPVLEWLDRHRPDALCLQELKCQNADFPLDAFRKAGYFAAFRGQKA 63

Query: 65  YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124
           +NGVA+LS+ +P E++        D +AR I     +    + I N Y+P G       +
Sbjct: 64  FNGVAVLSRSEPSEVLLEFGDGKPDEEARLIA----VKLNGIWIVNTYVPQGRSPEEPAF 119

Query: 125 DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ 184
           + K+ +  R   +   R E  +PL++ GD N+ P+  D ++P        F     ++  
Sbjct: 120 EYKLDFFGRLKSWLDGRFEPSQPLVWTGDINVAPEAIDLFDPKRLAGKVSFHPREHEALA 179

Query: 185 KLQNMGFTDAIRATHDTHHLYSFWDYY-ADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            +   G  D  R  H     ++FWDY    S+ +N G R+DHI  +          + D 
Sbjct: 180 AVAAWGLVDVFRKLHPDTKQFTFWDYRLPQSFKRNLGWRLDHIYATRTLADACLECQADG 239

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
           +PRG   PSDHTPV    D+
Sbjct: 240 EPRGRETPSDHTPVWAEFDL 259


>gi|146340267|ref|YP_001205315.1| exodeoxyribonuclease III [Bradyrhizobium sp. ORS278]
 gi|146193073|emb|CAL77084.1| exodeoxyribonuclease III (Exonuclease III) (EXO III) (AP
           endonuclease VI) [Bradyrhizobium sp. ORS278]
          Length = 262

 Score =  193 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 89/256 (34%), Positives = 141/256 (55%), Gaps = 3/256 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+N+N++R R+ NL AW++   PDI+CLQE K     FP E +    Y     GQK
Sbjct: 1   MKIATFNINNVRRRLPNLLAWLRAAKPDIVCLQELKCTLAEFPVEEIAKAGYGAVWQGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           ++NGVAIL++     ++           +           + + I  LYLP+GNP    K
Sbjct: 61  TWNGVAILARKAEPVLIR---TALPGDPSDKEARYIEAAVRGIVIACLYLPNGNPQPGPK 117

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +D K++W KR  + A++ ++ + P++ AGDYN+ P P D Y    W+ DA    + R ++
Sbjct: 118 FDYKLAWFKRLHKHAAKFIKDDLPVVLAGDYNVAPTPLDIYPTKSWDKDALIQPKSRAAY 177

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             L N G+ DAIR  H    +++FWDY  + W ++ G+R+DH++LSP+    L +A +D 
Sbjct: 178 AALVNQGWCDAIRTLHPDAPMFTFWDYKRNRWPRDAGLRLDHLLLSPQLAPRLKTAGVDR 237

Query: 244 KPRGWTKPSDHTPVIV 259
             RG    SDH P  +
Sbjct: 238 AIRGEDGASDHAPAWI 253


>gi|149374747|ref|ZP_01892520.1| exonuclease III [Marinobacter algicola DG893]
 gi|149360636|gb|EDM49087.1| exonuclease III [Marinobacter algicola DG893]
          Length = 270

 Score =  193 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 84/271 (30%), Positives = 127/271 (46%), Gaps = 11/271 (4%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           ++   ++NVNSIR R+H L A I   NPD I LQETK  D+ FP + ++ L YH+   GQ
Sbjct: 1   MM-FVSFNVNSIRTRLHQLEAVIDSLNPDFIGLQETKVTDEEFPEDAIRELGYHVHFHGQ 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K++ GVA+LS+  P  +    P D    Q R I   FT+N + L + N Y P G      
Sbjct: 60  KTHYGVALLSRQAPDSVQKGYPWDGEGSQRRLITGHFTVNGRKLTVINGYFPQGESRDHP 119

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175
            K+  K  +    +R+  +       ++  GD NI P         D     +      F
Sbjct: 120 VKFPAKEKFYADLMRYLDELKAANGEIVVMGDMNISPTDQDIGIGADNAKRWLRTGKCSF 179

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKN--KGIRIDHIMLSPEA 232
             E R+   ++++ GFTD  R  H      +S++DY +  + ++  +G+RID IM S   
Sbjct: 180 LPEEREWLGQVESRGFTDVFRHLHPEESDTFSWFDYRSKGFDRDPRRGLRIDLIMASDPL 239

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                 A +    R   +PSDH PV     +
Sbjct: 240 LPKAEEAGVSYDIRAMERPSDHCPVWARFAL 270


>gi|295136350|ref|YP_003587026.1| exodeoxyribonuclease [Zunongwangia profunda SM-A87]
 gi|294984365|gb|ADF54830.1| exodeoxyribonuclease [Zunongwangia profunda SM-A87]
          Length = 253

 Score =  193 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 80/263 (30%), Positives = 126/263 (47%), Gaps = 14/263 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY---HIET 59
           + + ++NVN IRA I      WI++ NPD++CLQE K +      E      Y   +   
Sbjct: 1   MRIISYNVNGIRAAIRKGFLDWIQQANPDVVCLQEIKAQPDQLNLEEFTDAGYPYQYWYP 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GVAILSK +P  +      D +D + R I A F        + +LYLP G  I
Sbjct: 61  AKKKGYSGVAILSKTEPNHVEYGTGIDYMDDEGRNIRADFG----DFSVMSLYLPSGTNI 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                + K+ ++  F ++     +    LI  GDYNI  +  D ++P+  +N + F    
Sbjct: 117 NR--LEHKLQYMDDFQQYIDSLKQQIPNLIICGDYNICHEAIDIHDPVRLKNVSGFLPVE 174

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R+        GF D+ R  +D    YS+W Y A++ + NKG RID+ +++      L  A
Sbjct: 175 REWIDNFMKSGFIDSFRYFNDEPDQYSWWSYRANARANNKGWRIDYNLVAAPLQEKLKRA 234

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
            I  +       SDH P++V L+
Sbjct: 235 VILPEAY----HSDHCPILVELE 253


>gi|160894365|ref|ZP_02075142.1| hypothetical protein CLOL250_01918 [Clostridium sp. L2-50]
 gi|156864066|gb|EDO57497.1| hypothetical protein CLOL250_01918 [Clostridium sp. L2-50]
          Length = 262

 Score =  193 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 72/264 (27%), Positives = 117/264 (44%), Gaps = 13/264 (4%)

Query: 2   SVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           + + + +WNVN IRA +  N   + KE + DI C+QE+K ++     E L     +    
Sbjct: 10  TTMKMISWNVNGIRACVGKNFMDFFKEADADIFCIQESKMQEGQLQLE-LPGYYQYWNYA 68

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+G AI +K +P+ +   +  ++ D + R I   +                   + 
Sbjct: 69  EKKGYSGTAIFAKKEPLSVAYGIGIEEHDHEGRVITLEYDNFYMVTVYTPNSQNELARLD 128

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
                      +   R   ++LE  +P++  GD N+     D  NP     +A FT E R
Sbjct: 129 YRM------KWEDDFREYLKQLEQTKPVVVCGDMNVAHTEIDLKNPKTNRKNAGFTDEER 182

Query: 181 QSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           + F  L + GF D  R  +     +YS+W Y   +  KN G RID+ + S    S L  A
Sbjct: 183 EKFSTLLDSGFVDTFRFFNPDAEGIYSWWSYRFKAREKNAGWRIDYFLTSKVLESRLVDA 242

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
           +I T+  G    SDH PV + +D+
Sbjct: 243 KIHTEVLG----SDHCPVELDIDL 262


>gi|226309896|ref|YP_002769790.1| exodeoxyribonuclease [Brevibacillus brevis NBRC 100599]
 gi|226092844|dbj|BAH41286.1| exodeoxyribonuclease [Brevibacillus brevis NBRC 100599]
          Length = 253

 Score =  193 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 69/260 (26%), Positives = 114/260 (43%), Gaps = 13/260 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      + KE N DI CLQETK ++     E  ++ + +     +
Sbjct: 1   MKLISWNVNGLRACVNKGFYEYFKEANADIFCLQETKLQEGQIEMEIGEAYHQYWNYAEK 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G A+ +K +P+ +   L  D                  T+   N           +
Sbjct: 61  KGYSGTAVFTKMEPLSVRYGLEEDHEPEGRVITLEFQDFYLVTVYTPNA------KRDLS 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           + D ++ W  RF  +  Q L+ ++P++  GD N+  Q  D  N      ++ FT E R+ 
Sbjct: 115 RLDYRLEWEDRFRNYLLQ-LDGKKPVVVCGDLNVAHQEIDLKNAKSNRGNSGFTPEEREK 173

Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
              L   GF D  R  +      Y++W +      +N G RID+ + S      L  A I
Sbjct: 174 MTSLLAAGFVDTYRYFYPDQTDAYTWWSFMPKVRERNIGWRIDYFLASERLAPALLRAGI 233

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
           D++  G    SDH PV++ L
Sbjct: 234 DSQVMG----SDHCPVVLEL 249


>gi|313618350|gb|EFR90386.1| exodeoxyribonuclease III [Listeria innocua FSL S4-378]
          Length = 253

 Score =  193 bits (491), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 65/261 (24%), Positives = 112/261 (42%), Gaps = 13/261 (4%)

Query: 5   TVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
            + +WNVN +RA +      + +E + DI CLQETK ++     + L +   +     +K
Sbjct: 4   KLISWNVNGLRAAVKKGFLEYFEEVDADIFCLQETKLQEGQIELD-LPAYKDYWNYAVKK 62

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            Y+G AI +K +P+ +   L   + D + R I   F                   +    
Sbjct: 63  GYSGTAIFTKVEPLSVQYGLGVPEHDTEGRVITLEFEDFYMVTVYTPNSQAELKRLDYRM 122

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
                   +  +    + L+  +P++  GD N+  +  D  NP     +A F+ E R  F
Sbjct: 123 ------TFEDAILEYVKNLDKTKPVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKF 176

Query: 184 QKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
               + GF D+ R  +      YS+W Y  ++ ++N G RID+ ++S      L  A+I 
Sbjct: 177 SAFLDAGFIDSFRYFYPDLTDAYSWWSYRMNARARNTGWRIDYFVVSERLKDKLVDAKIH 236

Query: 243 TKPRGWTKPSDHTPVIVSLDI 263
               G    SDH PV + L++
Sbjct: 237 ADVLG----SDHCPVELELNL 253


>gi|189184108|ref|YP_001937893.1| exodeoxyribonuclease III [Orientia tsutsugamushi str. Ikeda]
 gi|189180879|dbj|BAG40659.1| exodeoxyribonuclease III [Orientia tsutsugamushi str. Ikeda]
          Length = 264

 Score =  193 bits (490), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 101/264 (38%), Positives = 147/264 (55%), Gaps = 2/264 (0%)

Query: 1   MS-VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETL-QSLNYHIE 58
           MS  + + TWN+NSIRAR + L   I +  PDII LQE K E  NFPF+ + +S  Y+  
Sbjct: 1   MSCKLKILTWNINSIRARAYQLNQLISDTQPDIILLQEIKCESHNFPFQEINESHKYNFS 60

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
             GQKSYNGVAILSK+   +I     G+    QARFIEA        +++ ++Y+P+G  
Sbjct: 61  INGQKSYNGVAILSKFPLEDIKFSFLGNPCPDQARFIEANCLTEVGYVKVISIYVPNGGE 120

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
           + S K+  K+ +I  F+++      L E +I  GD+N+ P  +D Y+ I  +N  CFTL 
Sbjct: 121 VNSDKFQIKLLFIDEFIKYLHSSKNLGESIILGGDFNVAPYDNDVYSAIELQNTTCFTLP 180

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
            +Q  +KL N  F D  R  H     +++WDY A ++ +N G+RID+I+ +         
Sbjct: 181 EKQYIRKLINHNFIDIYRLFHQRQKKFTWWDYRAGAFERNLGMRIDYILCTISIALKATD 240

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
             ID   R   + SDH PVI S +
Sbjct: 241 CYIDYHTRNNHRASDHAPVIASFE 264


>gi|329964785|ref|ZP_08301808.1| exodeoxyribonuclease III [Bacteroides fluxus YIT 12057]
 gi|328524636|gb|EGF51699.1| exodeoxyribonuclease III [Bacteroides fluxus YIT 12057]
          Length = 254

 Score =  193 bits (490), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 81/261 (31%), Positives = 137/261 (52%), Gaps = 12/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60
           + + T+NVN +RA +   L  W+ +  PD++CLQETK + + +P + L SL Y  ++ + 
Sbjct: 1   MKIITYNVNGLRAAVTKGLPEWLAQEQPDVLCLQETKLQPEQYPADALDSLGYRHYLYSA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GVAIL++ +P  +   +  ++ D + RFI A +      L + ++Y P G    
Sbjct: 61  QKKGYSGVAILTRREPDHVEYGMGIEEYDNEGRFIRADYG----DLSVVSVYHPSG-TSG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   K+ W+++F  +  +       LI  GDYNI  +P D ++PI    ++ F  E R
Sbjct: 116 DERQAFKMVWLEKFQEYVLELQRTRPKLILCGDYNICHEPIDIHDPIRNATNSGFLPEER 175

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           +   +  N GF D+ R  H     Y++W Y  +S +KNKG RID+ M+S     +L  A+
Sbjct: 176 EWMTRFLNAGFIDSFRLLHPDKQEYTWWSYRFNSRAKNKGWRIDYCMVSEPVRPMLKEAQ 235

Query: 241 IDTKPRGWTKPSDHTPVIVSL 261
           I          SDH P+ + +
Sbjct: 236 ILNGA----VHSDHCPMSLEI 252


>gi|58617116|ref|YP_196315.1| exodeoxyribonuclease III [Ehrlichia ruminantium str. Gardel]
 gi|58416728|emb|CAI27841.1| Exodeoxyribonuclease III [Ehrlichia ruminantium str. Gardel]
          Length = 278

 Score =  193 bits (490), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 93/278 (33%), Positives = 146/278 (52%), Gaps = 17/278 (6%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           ++ +ATWNVNSIR RI +L  W+ + N DI  LQE K  +  FP   ++SL Y+    GQ
Sbjct: 1   MLRIATWNVNSIRKRIDHLCTWLTDYNIDIALLQEIKCTNDQFPALEIKSLGYNYYVHGQ 60

Query: 63  KSYNGVAILSKYQPI-----------------EIVTHLPGDDLDVQARFIEATFTINTQT 105
           K+ NGVAI++KY  +                   +          ++R++E     N   
Sbjct: 61  KARNGVAIITKYPIVEEVVTNIFSLYGTSNVCCELGSEDFTYNCEESRYLECVILYNGIK 120

Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165
           +R+G++Y+P+G  + S  +  K+ +  +   + S  L+ EE  I  GDYN+ P P D Y+
Sbjct: 121 IRVGSIYVPNGQSVESDAFQYKLGFFDQLKEYMSFLLKKEEICILGGDYNVAPYPIDMYS 180

Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225
             I     C     R+ F+ + N GF DA R  +D    +++W+Y   SW +NKG+RID 
Sbjct: 181 YEIMNGKLCCHQFEREKFRSIINTGFFDAFRLLNDDKKQFTWWNYKFGSWQENKGLRIDM 240

Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           ++LSP+A   + S  +  + RG   PSDH PV+  L++
Sbjct: 241 LLLSPQAMDKVSSCVVHDELRGLNVPSDHVPVVCDLNL 278


>gi|87122253|ref|ZP_01078135.1| exodeoxyribonuclease III [Marinomonas sp. MED121]
 gi|86162396|gb|EAQ63679.1| exodeoxyribonuclease III [Marinomonas sp. MED121]
          Length = 274

 Score =  193 bits (490), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 85/269 (31%), Positives = 126/269 (46%), Gaps = 9/269 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +RAR H +   +K  +PDII LQE K  D+ FP +  QS+ YH    GQK
Sbjct: 1   MKIVSFNINGLRARPHQIEELVKRQSPDIIGLQEIKVHDEMFPHDIPQSIGYHAYYYGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           S+ GVAI SK + +++    P D+ D Q R I ATF  +   L++ N Y P G  I    
Sbjct: 61  SHYGVAIFSKEEAVKVEYGFPNDEEDAQRRMIIATFNTDKGPLKVINGYFPQGENIEHET 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACFTL 177
                      L         +E +I  GD NI P   D           +      F  
Sbjct: 121 KFPAKQKFYADLMNYLANHVADEQVIVMGDINISPTDLDIGIGPQNAKRWLKTGKCSFQP 180

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSK--NKGIRIDHIMLSPEATS 234
             R+ + KL++ G TD  R  +      YS++DY +  +     +G+RID IM S     
Sbjct: 181 IEREWYAKLEDWGLTDTYRQLNPGKTDRYSWFDYRSKGFDDEPKRGLRIDVIMASNNLLP 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           LL  + ++   RG  KPSDH P+    ++
Sbjct: 241 LLQDSDVNYDIRGMEKPSDHAPIWSDFEL 269


>gi|58584173|ref|YP_203189.1| exodeoxyribonuclease III [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|188579169|ref|YP_001916098.1| exodeoxyribonuclease III [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|58428767|gb|AAW77804.1| exodeoxyribonuclease III [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|188523621|gb|ACD61566.1| exodeoxyribonuclease III [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 259

 Score =  193 bits (490), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 88/259 (33%), Positives = 135/259 (52%), Gaps = 6/259 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A+WNVNS+  R+ +L  W+    PD++ +QETK ED  FP   L  L Y    CGQK
Sbjct: 1   MKIASWNVNSLNVRLPHLQQWLTAFAPDVVGIQETKLEDHRFPDAALAELGYRSVFCGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAILS+   +++   +PG D   Q              +RI NLY+ +G  + + K
Sbjct: 61  TYNGVAILSRSPALDVQMGIPGFDDVQQRVIAATVDG-----VRIINLYVVNGQDVGTDK 115

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN-PIIWENDACFTLEVRQS 182
           Y  K+ W+     + +Q L+    L+  GD+NI P   D ++  +  E+    + + R +
Sbjct: 116 YAYKLRWLAAAHDWIAQELQTYPQLVVLGDFNIAPDARDVHDATVWNEHHILTSTDERAA 175

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
            +KL  MG  DA R        +S+WDY    + +N G+RID  ++S    +    + ID
Sbjct: 176 LEKLLAMGLHDAFRLHTQDAEHFSWWDYRQAGFRRNLGLRIDLTLVSDALRTRAVESGID 235

Query: 243 TKPRGWTKPSDHTPVIVSL 261
            +PR W +PSDH P  V L
Sbjct: 236 REPRTWERPSDHAPAWVRL 254


>gi|77919973|ref|YP_357788.1| exonuclease III [Pelobacter carbinolicus DSM 2380]
 gi|77546056|gb|ABA89618.1| Exodeoxyribonuclease III [Pelobacter carbinolicus DSM 2380]
          Length = 276

 Score =  193 bits (490), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 88/272 (32%), Positives = 136/272 (50%), Gaps = 11/272 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++NVN IRAR+H L A I  ++P+II +QETK  D +FP + ++ L YH+E  GQK
Sbjct: 1   MKIVSFNVNGIRARLHQLRAVIDNHSPEIIGVQETKVTDADFPVDAIRELGYHVEYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGD-DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           S+ GVA+LS+  P+++V  LPGD     +     A  T + + L + N Y P G      
Sbjct: 61  SHYGVALLSRQAPVQVVKGLPGDAQDAQRRLIGAAYETEHGEPLWVFNAYFPQGESRQHP 120

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175
            KY  K  + +    F   R   E  LI  GD N+  +        D     +      F
Sbjct: 121 TKYPGKERFYRELGDFLESRFSPEADLIVMGDANVAFRDEDIGIGQDNAKRWLRTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKN--KGIRIDHIMLSPEA 232
             E R   ++L + G  D  R +  D   L+S++DY +  + K+  +G+RID I+ +   
Sbjct: 181 LPEERDWLRRLFDWGLVDTFRQSRSDAAELFSWFDYRSRGFEKDPRRGLRIDLILATQVL 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
           +     + ID   RG  KPSDH P+   +D+ 
Sbjct: 241 SRRCSGSGIDYGIRGMEKPSDHCPIWAEVDLS 272


>gi|315223362|ref|ZP_07865221.1| exodeoxyribonuclease III [Capnocytophaga ochracea F0287]
 gi|314946693|gb|EFS98682.1| exodeoxyribonuclease III [Capnocytophaga ochracea F0287]
          Length = 254

 Score =  193 bits (490), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 83/263 (31%), Positives = 132/263 (50%), Gaps = 14/263 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY---HIET 59
           +   ++NVN IRA +    A W+K  NPD++CLQE K  +   P E    L Y   +  +
Sbjct: 1   MKTISYNVNGIRAALTKGFAEWLKSANPDVLCLQEIKATEDQIPTEVFSELGYKYQYYHS 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GVAILSK +P  +      D +D + R + A F      L + +LYLP G   
Sbjct: 61  AEKKGYSGVAILSKIEPKHVEVGTGIDYMDKEGRVLRADFET----LSVMSLYLPSGTNP 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                D K++++  F ++  +  +    L+  GDYNI  +  D ++PI   N + F    
Sbjct: 117 DR--LDFKLTFMADFKKYIDKLKQKVPNLVICGDYNICHEAIDIHDPIRNANVSGFLPIE 174

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R+   K    GF D+ R  H   H YS+W Y A++ + NKG RID+ ++S    + +  A
Sbjct: 175 REWLDKFMKSGFIDSFRYFHKEAHQYSWWSYRANARNNNKGWRIDYHLVSTPLENRMERA 234

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
            I  +     K SDH P+++ ++
Sbjct: 235 LILPEA----KHSDHCPILLIIN 253


>gi|254796778|ref|YP_003081615.1| exodeoxyribonuclease III [Neorickettsia risticii str. Illinois]
 gi|254590017|gb|ACT69379.1| exodeoxyribonuclease III [Neorickettsia risticii str. Illinois]
          Length = 260

 Score =  193 bits (490), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 80/261 (30%), Positives = 135/261 (51%), Gaps = 4/261 (1%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           ++ VATWNVNSIR R   ++A +   + D++ LQE K ++ +FP      L+Y++    Q
Sbjct: 1   MLKVATWNVNSIRQRAEAVSALLVSEDLDVLLLQELKCQESDFPLHVFHDLSYNVILKCQ 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K YNGVAI S+   + I        +D +AR++E   +   + +R+ ++Y+P+     S 
Sbjct: 61  KGYNGVAIASR---LPITKISDEIYMDGEARYVEGVISFFDKCIRLISVYVPNAQAAGSP 117

Query: 123 KYDDKISWIKRFLRFASQRL-ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
           +++ K+ +     R     L    + ++  GD N  P+  D Y+ +  +    F +E R 
Sbjct: 118 RFEYKMQFHDALARRIHCYLLNNNDIILLGGDMNAAPEDIDVYDHVKLDGCTGFHIEERS 177

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             ++L N+G  D  R  + T   +S+WDY      +N+G+RIDHI+ S E    L    I
Sbjct: 178 KLRELLNLGLFDTFRMKYPTKQEFSWWDYRGGGLQRNEGMRIDHILASAEGMDHLLDCYI 237

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
             + R   +PSDH PV+  L+
Sbjct: 238 LKELRHIARPSDHVPVVCVLN 258


>gi|330506670|ref|YP_004383098.1| exodeoxyribonuclease III [Methanosaeta concilii GP-6]
 gi|328927478|gb|AEB67280.1| exodeoxyribonuclease III [Methanosaeta concilii GP-6]
          Length = 257

 Score =  193 bits (490), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 69/266 (25%), Positives = 112/266 (42%), Gaps = 12/266 (4%)

Query: 1   MSVVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           M  + + +WNVN +RA        W+ ++ PD++CLQE K  +   P E      Y    
Sbjct: 1   MPSMRILSWNVNGLRAIYKKGFVDWLLKDRPDVLCLQEIKATEDQIPKELKGLPGYISFF 60

Query: 60  CG--QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
               +K  +GVA+ +K + + +   L     D + R I A +        + ++Y P+G 
Sbjct: 61  SPGARKGRDGVALFTKIKTLSLEYSLGLPGFDDEQRAIVADYG----DFLLFDVYFPNGK 116

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
             +  +   K+ +   FL    + +     ++  GD N   +  D   P   E  + F  
Sbjct: 117 -ASKERLSYKMRFYDLFLDLMDRLVAEGRDIVICGDVNTAHKEIDLARPKPNEKISGFLP 175

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
           E R    +L   GF D  R  H     YSFWD    +  +N G RID+  +S      + 
Sbjct: 176 EERAWIDRLIEHGFLDTFRLFHPEGEKYSFWDMKTRARERNVGWRIDYFFVSLGMRDRVK 235

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263
           SA I     G    SDH PV + +++
Sbjct: 236 SAFILDDVYG----SDHCPVGIEIEL 257


>gi|220909952|ref|YP_002485263.1| exodeoxyribonuclease III Xth [Cyanothece sp. PCC 7425]
 gi|219866563|gb|ACL46902.1| exodeoxyribonuclease III Xth [Cyanothece sp. PCC 7425]
          Length = 268

 Score =  193 bits (490), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 91/266 (34%), Positives = 141/266 (53%), Gaps = 8/266 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSIR R+  +  W++ N  D++CLQETK  D +FP      L Y +   GQK
Sbjct: 1   MKIATWNVNSIRTRLVQVVEWLQANPIDVLCLQETKVIDSDFPRSPFLDLGYQVHCYGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL-------RIGNLYLPHG 116
           SYNGVAILS+ +P ++ +       D         F    + +       R+ NLY+P+G
Sbjct: 61  SYNGVAILSRSEPDQVRSGFATVLADSPQVEAALEFDQQKRVISAVWGNLRVVNLYVPNG 120

Query: 117 NPITSTKYDDKISWIKRFLRFASQ-RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
           + I S KY  K++W+     +    + +  + ++  GD+NI  +  D ++P   E     
Sbjct: 121 SAIGSEKYVYKLAWLDLLRDYLKTLQAQAPQDMVICGDFNIALEDRDIHDPQGRETQVMA 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
           T   RQ+ Q + ++GF D  R        +S+WDY A S+ +++G RIDH+ L+    + 
Sbjct: 181 TDTERQALQAILDLGFADGFRKFTAEGGHFSWWDYRAGSFRRDRGWRIDHLYLNQSLYAK 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
             +  ID  PR   +PSDHTPVI+ L
Sbjct: 241 AVACTIDKTPRHNPQPSDHTPVILEL 266


>gi|269218059|ref|ZP_06161913.1| exodeoxyribonuclease III [Actinomyces sp. oral taxon 848 str.
           F0332]
 gi|269212994|gb|EEZ79334.1| exodeoxyribonuclease III [Actinomyces sp. oral taxon 848 str.
           F0332]
          Length = 263

 Score =  193 bits (489), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 76/264 (28%), Positives = 123/264 (46%), Gaps = 8/264 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+NSIRAR     A ++  + D++ LQETK     FP    ++  Y +   G  
Sbjct: 1   MRIATWNINSIRARHERALAVLERWDLDVLLLQETKCRPDQFPAAEFEAAGYEVAAHGLD 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLD----VQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            +NGVAILS+    E+     G         + +            + + +LY+P+G  +
Sbjct: 61  QWNGVAILSRVGIEEVTVGFEGQPAFGKEGAEPKVEARAIGARCGGVGVWSLYVPNGRAL 120

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL 177
               Y  K+ ++    R A  +L  +       AGD+N++P   D ++P ++  +   + 
Sbjct: 121 DDPHYPYKLEFLAALRRAAGAQLAEDSSAQLLLAGDWNVVPSDADVWDPELFRGELYASD 180

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
             R++F    + GF +  R    T   Y+FWDY    + KN+G+RID    SP     + 
Sbjct: 181 PEREAFHAFADAGFAEVTRGA--TEAPYTFWDYQRLRFPKNEGMRIDFAWASPALAGRVA 238

Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261
           +A ID   R     SDH PV+V L
Sbjct: 239 AAHIDRNERKGKGASDHVPVVVEL 262


>gi|114327927|ref|YP_745084.1| exodeoxyribonuclease III [Granulibacter bethesdensis CGDNIH1]
 gi|114316101|gb|ABI62161.1| exodeoxyribonuclease III [Granulibacter bethesdensis CGDNIH1]
          Length = 259

 Score =  193 bits (489), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 104/259 (40%), Positives = 139/259 (53%), Gaps = 3/259 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           V +ATWNVNSIR R  ++ +W++ N PDI+ LQE K E   FP +    L Y  E  GQK
Sbjct: 3   VKIATWNVNSIRQREGHVLSWLERNQPDILLLQEIKCETAAFPAQAFAKLGYQAEAVGQK 62

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVA+LS+         LPG   D           +NT    IGNLYLP+GN      
Sbjct: 63  AYNGVAVLSRVPFEVTQRTLPGLPPDDAQARYIEIRALNTI---IGNLYLPNGNSGGEAG 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W++   + A+  L   E LI AGDYN+ P   D     +   DA    E R  F
Sbjct: 120 YAYKLGWMEHLAQHAASLLAAGEDLILAGDYNVCPTEEDYAPGALPPEDALLRPETRARF 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + L  +G TDA+RA   +  +Y+FWDY A +W +++G+RIDH +LS      L  A  D 
Sbjct: 180 RSLLWLGLTDAVRAMRPSGQIYTFWDYQAGAWPRDRGLRIDHALLSSRMAERLIEALPDR 239

Query: 244 KPRGWTKPSDHTPVIVSLD 262
             R   +PSDH PVI+S +
Sbjct: 240 MERDQPQPSDHVPVIISFE 258


>gi|91975059|ref|YP_567718.1| exodeoxyribonuclease III (xth) [Rhodopseudomonas palustris BisB5]
 gi|91681515|gb|ABE37817.1| exodeoxyribonuclease III (xth) [Rhodopseudomonas palustris BisB5]
          Length = 274

 Score =  193 bits (489), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 94/263 (35%), Positives = 144/263 (54%), Gaps = 3/263 (1%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64
            +AT+N+N++  R+ NL  W++   PDI+CLQE K E + FP + L    Y+    GQK+
Sbjct: 15  KIATFNINNVNKRLPNLLQWLRAAKPDIVCLQELKAEQRKFPEQALHDAGYNAAWVGQKT 74

Query: 65  YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124
           +NGVAIL++ + + +                          + +G +Y P+GNP    K+
Sbjct: 75  WNGVAILARKRSLIVT---QTKLPGDADDQQARYIEAAIGGILVGCVYAPNGNPQPGPKF 131

Query: 125 DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ 184
           DDKISW+KR  R A + L    P++ AGD+N+ P   D Y    W  DA    E R+++ 
Sbjct: 132 DDKISWMKRLNRHAGKLLASGAPVVIAGDFNVAPTALDIYPTKSWNEDALIQPESRRAYA 191

Query: 185 KLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK 244
           KL   G+TDA+RA H    +Y+FW Y+ + + ++ G+R+DH+++SPE  S L +A +D  
Sbjct: 192 KLLGQGWTDAVRALHPDQRVYTFWTYWRNRFERDDGLRLDHLLVSPELASRLFAAGVDRA 251

Query: 245 PRGWTKPSDHTPVIVSLDIPEPR 267
            R     SDH P  + L  P PR
Sbjct: 252 VRAREGASDHAPAWIVLKAPSPR 274


>gi|148255197|ref|YP_001239782.1| exodeoxyribonuclease III [Bradyrhizobium sp. BTAi1]
 gi|146407370|gb|ABQ35876.1| Exodeoxyribonuclease III [Bradyrhizobium sp. BTAi1]
          Length = 256

 Score =  193 bits (489), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 93/258 (36%), Positives = 141/258 (54%), Gaps = 3/258 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+N+N++R R+ NL +W++   PDI+CLQE K     FP + + +  Y     GQK
Sbjct: 1   MKIATFNINNVRRRLPNLLSWLRSARPDIVCLQELKCAQAEFPADAIATAGYGAVWQGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           ++NGVAIL++     ++           A           + + IG LYLP+GNP    K
Sbjct: 61  TWNGVAILARKAEPVLIR---TALPGAPADKEARYIEAAVRGIVIGCLYLPNGNPQPGPK 117

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +D K++W KR  R A+  +E + P++ AGDYN+ P P D Y    W  DA      R +F
Sbjct: 118 FDYKLAWFKRLHRHAADFIEHDLPVVLAGDYNVAPTPLDIYPTRSWNKDALIQPSSRAAF 177

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + L + G+ DAIR  H    +++FWDY  + W ++ G+R+DH++LSP+    L  A ID 
Sbjct: 178 KALLDQGWCDAIRTLHPDQPMFTFWDYKRNRWPRDAGLRLDHLLLSPQLAPRLTKAGIDR 237

Query: 244 KPRGWTKPSDHTPVIVSL 261
             RG    SDH P  + L
Sbjct: 238 AIRGEAGASDHAPAWIVL 255


>gi|192292098|ref|YP_001992703.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris TIE-1]
 gi|192285847|gb|ACF02228.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris TIE-1]
          Length = 256

 Score =  193 bits (489), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 93/259 (35%), Positives = 143/259 (55%), Gaps = 3/259 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+NVN++  R+  L AW+K   PD++CLQE K  D +FP   L+   Y     GQK
Sbjct: 1   MKIATFNVNNVNKRLPVLLAWLKTARPDVVCLQELKAADTDFPEAALRKAGYAAAWAGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           S+NGVAIL++ + I +           +              + +G LY P+GNP    K
Sbjct: 61  SWNGVAILARRREIVVTRRRLPGAPHDKQS---RYIEAAVAGIIVGCLYAPNGNPQPGPK 117

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +DDK++W+KR  R A+  L+   P++ AGD+N++P P D Y    W+ DA    E R+ F
Sbjct: 118 FDDKLAWLKRLNRHAATLLKSGAPVVLAGDFNVVPTPADIYPGKSWDKDALVQPEPRKLF 177

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             L   G+TDA+R +H     Y+FW Y+ + + ++ G+RIDH++L P   + L  A +D 
Sbjct: 178 AALLRQGWTDALRHSHPEDAPYTFWSYWRNRFERDAGLRIDHLLLDPSLAARLKRAGVDR 237

Query: 244 KPRGWTKPSDHTPVIVSLD 262
           K R   + SDH P  V ++
Sbjct: 238 KVRAAPEASDHAPAWVVIE 256


>gi|89897437|ref|YP_520924.1| hypothetical protein DSY4691 [Desulfitobacterium hafniense Y51]
 gi|219670588|ref|YP_002461023.1| exodeoxyribonuclease III Xth [Desulfitobacterium hafniense DCB-2]
 gi|89336885|dbj|BAE86480.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219540848|gb|ACL22587.1| exodeoxyribonuclease III Xth [Desulfitobacterium hafniense DCB-2]
          Length = 250

 Score =  193 bits (489), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 66/260 (25%), Positives = 112/260 (43%), Gaps = 13/260 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      + ++   DI CLQETK +++  PF+ L+  + +     +
Sbjct: 1   MKLISWNVNGLRACLNKGFMDFFQQEQADIFCLQETKLQEEQIPFQ-LEGYHAYWNFAQK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G A+ +K +P+ +   +  ++ D + R I   F                   +   
Sbjct: 60  KGYSGTAVFAKKEPLSVSYGIGQEEHDQEGRVITLEFDTFYLVTVYTPNSQRDLARLDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +       + LE  +P+I  GD N+     D  NP     +A FT E R  
Sbjct: 120 M------IWEAEFLGYLKNLEKSKPVILCGDLNVAHTEIDLKNPKTNRKNAGFTDEERAK 173

Query: 183 FQKLQNMGFTDAIRATHDTHHL-YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L   GF D  R  +      Y++W Y  ++ + N G RID+  +S    + L  A I
Sbjct: 174 FSELLKNGFIDTFRHFNPDKKEAYTWWSYMFNARANNAGWRIDYFCVSESLKNELKDAMI 233

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
             +  G    SDH PV + +
Sbjct: 234 YDQIMG----SDHCPVGLEI 249


>gi|220933300|ref|YP_002512199.1| exodeoxyribonuclease III Xth [Thioalkalivibrio sp. HL-EbGR7]
 gi|219994610|gb|ACL71212.1| exodeoxyribonuclease III Xth [Thioalkalivibrio sp. HL-EbGR7]
          Length = 261

 Score =  193 bits (489), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 78/269 (28%), Positives = 124/269 (46%), Gaps = 13/269 (4%)

Query: 4   VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + T N N IR A       W+K+ + D++C+QETK ++     ET     Y       
Sbjct: 1   MRIITLNANGIRSAARKGFFDWLKQQDADVVCIQETKAQEHQLGDETFWPQGYFTYYHDA 60

Query: 62  -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GVA+  + +P  I+T L  ++ D + R+IEA F      L + +LYLP G+   
Sbjct: 61  EKKGYSGVALFCRSEPDRIITGLGSEEFDQEGRYIEAQFG----KLSVISLYLPSGSSSE 116

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
                 K  ++  FL             I  GD+NI  +P D  N    + ++ F  E R
Sbjct: 117 ER-QAAKFRFMDLFLDHMRALRRKRREYIVCGDWNIAHKPIDLKNWKSNQKNSGFLPEER 175

Query: 181 QSFQK-LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
                    +G+ DA R  +     Y++W     +W+KN G R+D+ ++SP     + SA
Sbjct: 176 AWLDTLFDELGWVDAFRVVNTEPDQYTWWSNRGQAWAKNVGWRLDYQVVSPGLRDKIRSA 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268
            I T+ R     SDH P+ +  D+P P  
Sbjct: 236 SIYTEQR----FSDHAPLSMDYDLPFPPD 260


>gi|126668281|ref|ZP_01739241.1| exonuclease III [Marinobacter sp. ELB17]
 gi|126627307|gb|EAZ97944.1| exonuclease III [Marinobacter sp. ELB17]
          Length = 270

 Score =  193 bits (489), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 87/271 (32%), Positives = 134/271 (49%), Gaps = 11/271 (4%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           ++   ++NVNSIR R+H LAA I++  PD I LQETK  D++FP   +++L YH+   GQ
Sbjct: 1   MM-FVSFNVNSIRTRLHQLAAVIEQLEPDFIGLQETKVSDEDFPLADIEALGYHVHFHGQ 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K++ GVA++SK  P ++    P D  + Q R I A FT+N +TL + N Y P G      
Sbjct: 60  KTHYGVALMSKMAPDKVYKGFPDDLDNAQRRLITADFTVNGETLTVINGYFPQGESRDHP 119

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175
            K+  K  +    + +  +       ++  GD NI P         D     +      F
Sbjct: 120 VKFPAKQKFYADLMSYLDELKLRNTKVVVMGDVNISPTDKDIGIGADNAKRWLRSGKCSF 179

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232
             E RQ   ++++ G+TD  R  H      +S++DY +  + +   +G+RID IM S   
Sbjct: 180 LPEERQWLGEVESRGYTDVFRHLHPHEADTFSWFDYRSKGFDREPKRGLRIDLIMASDNL 239

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            S   SA +    R   +PSDH PV     +
Sbjct: 240 LSQAKSAGVSYDVRAMDRPSDHAPVWARFTL 270


>gi|325960168|ref|YP_004291634.1| exodeoxyribonuclease iii Xth [Methanobacterium sp. AL-21]
 gi|325331600|gb|ADZ10662.1| exodeoxyribonuclease III Xth [Methanobacterium sp. AL-21]
          Length = 257

 Score =  193 bits (489), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 65/263 (24%), Positives = 112/263 (42%), Gaps = 12/263 (4%)

Query: 1   MSVVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HI 57
           M  + + +WNVN IRA        W     PDI+C+QETK   K FP +      Y  ++
Sbjct: 1   MDKIRILSWNVNGIRAVHKKGFLDWFNNEKPDILCIQETKAVRKQFPPDIRAVDGYQLYV 60

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
               +K Y+G A  +  +P  +      +  D + R +   +        + N+Y P+G 
Sbjct: 61  SEASRKGYSGTATYTSLKPEGVKYGFGVEKFDTEGRTLITDYG----DFVLFNIYFPNGK 116

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
                  D K+ +   FL +A +  +  + ++  GD N   +  D  +P      + F  
Sbjct: 117 MSKER-LDYKMEFYDTFLEYADELKDQGKNIVVCGDVNTAHREIDLAHPKENSKISGFLP 175

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
           E R    KL + G+ D  R  +     Y++W Y   +  +N G R+D+  ++ +    + 
Sbjct: 176 EERAWIDKLLDHGYVDTFREFNQEPEEYTWWSYRTRARERNVGWRLDYFFVNRDFMKNVS 235

Query: 238 SARIDTKPRGWTKPSDHTPVIVS 260
           +A I  +  G    SDH PV + 
Sbjct: 236 AAYILPEVMG----SDHCPVGID 254


>gi|255974862|ref|ZP_05425448.1| exonuclease III [Enterococcus faecalis T2]
 gi|255967734|gb|EET98356.1| exonuclease III [Enterococcus faecalis T2]
          Length = 257

 Score =  193 bits (489), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 77/263 (29%), Positives = 116/263 (44%), Gaps = 13/263 (4%)

Query: 2   SVVTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           S +   +WNVN +RA +  N      E + D  CLQETK +      E L   + +    
Sbjct: 5   STMKCISWNVNGLRAVVKKNFMDVFNELDADFFCLQETKLQAGQIDLE-LPGYHQYWNYA 63

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+G AI +K + + +   L  +  D + R I   +                 +   
Sbjct: 64  EKKGYSGTAIFAKEEALSVRYGLGIEAHDQEGRVITLEYPEF-----FMVTCYTPNSQAE 118

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   +++W   F  +    L  E+P+I  GD N+  Q  D  N    + +A FT E R
Sbjct: 119 LKRLAYRMTWEDAFRAY-LNELNQEKPVILCGDLNVAHQKIDLKNWKTNQKNAGFTPEER 177

Query: 181 QSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           Q F +L + GFTD  R  +     +YS+W Y  ++   N G RID+ ++S      L SA
Sbjct: 178 QKFTELLDSGFTDTFRYFYPEAEGIYSWWSYRFNARKNNAGWRIDYFVVSESLNERLVSA 237

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
           +I T   G    SDH PV V LD
Sbjct: 238 KIHTDILG----SDHCPVEVVLD 256


>gi|256763359|ref|ZP_05503939.1| exonuclease III [Enterococcus faecalis T3]
 gi|256684610|gb|EEU24305.1| exonuclease III [Enterococcus faecalis T3]
          Length = 257

 Score =  193 bits (489), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 77/263 (29%), Positives = 116/263 (44%), Gaps = 13/263 (4%)

Query: 2   SVVTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           S +   +WNVN +RA +  N      E + D  CLQETK +      E L   + +    
Sbjct: 5   STMKCISWNVNGLRAVVKKNFMDVFNELDADFFCLQETKLQAGQIDLE-LPGYHQYWNYA 63

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+G AI +K + + +   L  +  D + R I   +                 +   
Sbjct: 64  EKKGYSGTAIFAKEEALSVRYGLGIESHDQEGRVITLEYPEF-----FMVTCYTPNSQAE 118

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   +++W   F  +    L  E+P+I  GD N+  Q  D  N    + +A FT E R
Sbjct: 119 LKRLAYRMTWEDAFRAY-LNELNQEKPVILCGDLNVAHQKIDLKNWKTNQKNAGFTPEER 177

Query: 181 QSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           Q F +L + GFTD  R  +     +YS+W Y  ++   N G RID+ ++S      L SA
Sbjct: 178 QKFTELLDSGFTDTFRYFYPEAEGIYSWWSYRFNARKNNAGWRIDYFVVSESLNERLVSA 237

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
           +I T   G    SDH PV V LD
Sbjct: 238 KIHTDILG----SDHCPVEVVLD 256


>gi|255971866|ref|ZP_05422452.1| exonuclease III [Enterococcus faecalis T1]
 gi|255962884|gb|EET95360.1| exonuclease III [Enterococcus faecalis T1]
          Length = 257

 Score =  193 bits (489), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 77/263 (29%), Positives = 116/263 (44%), Gaps = 13/263 (4%)

Query: 2   SVVTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           S +   +WNVN +RA +  N      E + D  CLQETK +      E L   + +    
Sbjct: 5   STMKCISWNVNGLRAVVKKNFMDVFNELDADFFCLQETKLQAGQIDLE-LPGYHQYWNYA 63

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+G AI +K + + +   L  +  D + R I   +                 +   
Sbjct: 64  EKKGYSGTAIFAKEEALSVRYGLGIEAHDQEGRVITLEYPEF-----FMVTCYTPNSQAE 118

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   +++W   F  +    L  E+P+I  GD N+  Q  D  N    + +A FT E R
Sbjct: 119 LKRLAYRMTWEDAFRAY-LNELNQEKPVILCGDLNVAHQNIDLKNWKTNQKNAGFTPEER 177

Query: 181 QSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           Q F +L + GFTD  R  +     +YS+W Y  ++   N G RID+ ++S      L SA
Sbjct: 178 QKFTELLDSGFTDTFRYFYPEAEGIYSWWSYRFNARKNNAGWRIDYFVVSESLNERLVSA 237

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
           +I T   G    SDH PV V LD
Sbjct: 238 KIHTDILG----SDHCPVEVVLD 256


>gi|319902391|ref|YP_004162119.1| exodeoxyribonuclease III Xth [Bacteroides helcogenes P 36-108]
 gi|319417422|gb|ADV44533.1| exodeoxyribonuclease III Xth [Bacteroides helcogenes P 36-108]
          Length = 267

 Score =  193 bits (489), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 80/261 (30%), Positives = 138/261 (52%), Gaps = 12/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60
           + + T+NVN +RA +      W+ +  PD++CLQETK + + +P + L SL Y  ++ + 
Sbjct: 14  MKIITYNVNGLRAAVTKGFPEWLAQEQPDVLCLQETKLQPEQYPADALDSLGYKHYLYSA 73

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GVAIL+K +P  +   +  ++ D + RF+ A +      L I ++Y P G    
Sbjct: 74  RKKGYSGVAILAKREPDRVEYGMGMEEYDSEGRFLRADYD----DLSIVSVYHPSG-TSG 128

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   K+ W+++F  +  +       LI  GDYNI  +P D ++PI    ++ F  E R
Sbjct: 129 DERQAFKMVWLEKFQEYVLELQRTRPKLILCGDYNICHEPIDIHDPIRNATNSGFLPEER 188

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           +   +  + GFTD+ R  H     Y++W Y  +S ++NKG RID+ M++     +L  AR
Sbjct: 189 EWMTRFLDAGFTDSFRFLHPDKQEYTWWSYRFNSRARNKGWRIDYCMVNEPVRPMLKDAR 248

Query: 241 IDTKPRGWTKPSDHTPVIVSL 261
           I          SDH P+++ +
Sbjct: 249 ILNDA----VHSDHCPMLLEI 265


>gi|170759835|ref|YP_001786903.1| exodeoxyribonuclease III [Clostridium botulinum A3 str. Loch Maree]
 gi|169406824|gb|ACA55235.1| exodeoxyribonuclease III [Clostridium botulinum A3 str. Loch Maree]
          Length = 253

 Score =  192 bits (488), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 69/262 (26%), Positives = 115/262 (43%), Gaps = 12/262 (4%)

Query: 4   VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + +WNVN +RA    N   WI E +PDI+C+QETK ++            Y+      
Sbjct: 1   MRIYSWNVNGLRAVAKKNFIEWIGEESPDILCIQETKLQENQLEDNIKNIDGYYSYFSFA 60

Query: 62  -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GVA  +K +PI +   +  +  D + R +   F        + N+Y P+G    
Sbjct: 61  AKKGYSGVATYTKVKPISVKHSMGIEKFDSEGRILITEFK----NFTLLNIYFPNGQ-RD 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   K+ + +    +  + ++  + L+  GDYN      D  NP   E  + F    R
Sbjct: 116 EERLQYKLDFYEALFNYCDELVKEGKKLVICGDYNTAHNEIDLKNPKANEKTSGFLRIER 175

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
               K+   G+TD  R  +     YS+W Y   +  +N G RID+  +S      + +  
Sbjct: 176 DWLDKIIERGYTDTFRNMNPDKIKYSWWSYRFKARERNAGWRIDYHFVSNNLLDRVENTE 235

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I  +  G    SDH PV++ L 
Sbjct: 236 ILNEVYG----SDHCPVMLELK 253


>gi|256827574|ref|YP_003151533.1| exodeoxyribonuclease III [Cryptobacterium curtum DSM 15641]
 gi|256583717|gb|ACU94851.1| exodeoxyribonuclease III [Cryptobacterium curtum DSM 15641]
          Length = 262

 Score =  192 bits (488), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 67/267 (25%), Positives = 112/267 (41%), Gaps = 12/267 (4%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA      +        D+  LQETK ++     E       H     +
Sbjct: 1   MRLVSWNVNGLRAAEKKGFSDIFTSLKADVFALQETKLQEGQIDLE-FPDYESHWSYAER 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITS 121
           K Y+G A+ ++ +P++++  L    LD + R     F       +   N           
Sbjct: 60  KGYSGTAVYARQKPLQVLHGLGVPHLDTEGRICALEFPEFWFVDVYTPNAQNELARIDHR 119

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLI----FAGDYNIIPQPHDCYNPIIWENDACFTL 177
            ++DD      + L   +  L  +          GD+N+  +  D  NP     +A F+ 
Sbjct: 120 MEWDDAFRDFCKGLEKGTTPLGPDTAQPKPVIMCGDFNVAHEEIDLKNPKSNRGNAGFSD 179

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
           E R+ F KL + GF D  R  + T    YS+W Y  ++ + N G RID+ ++S      +
Sbjct: 180 EEREKFTKLLDAGFVDTFRLLNPTEVGAYSWWSYRFNARANNAGWRIDYFLVSKSLADRV 239

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263
            +ARI     G    SDH PV + +D+
Sbjct: 240 RAARIHADLFG----SDHCPVSLDIDL 262


>gi|317476209|ref|ZP_07935460.1| exodeoxyribonuclease III [Bacteroides eggerthii 1_2_48FAA]
 gi|316907620|gb|EFV29323.1| exodeoxyribonuclease III [Bacteroides eggerthii 1_2_48FAA]
          Length = 254

 Score =  192 bits (488), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 80/261 (30%), Positives = 136/261 (52%), Gaps = 12/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60
           + + T+NVN +RA +   L  W+    PD++CLQETK + + +P E L +L Y  ++ + 
Sbjct: 1   MKIITYNVNGLRAAVTKGLPEWLANEQPDVLCLQETKLQPEQYPAEALDALGYKHYLYSA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GVAIL+K +P  +   +  ++ D + RF+ A +      L I ++Y P G    
Sbjct: 61  RKKGYSGVAILTKREPDHVEYGMGMEEYDSEGRFMRADYG----DLSIVSVYHPSG-TSG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   K+ W+++F ++  +       LI  GDYNI  +  D ++P+    ++ F  E R
Sbjct: 116 DERQAFKMVWLEKFRQYVVELQRTRPKLILCGDYNICHEAIDIHDPVRNATNSGFLPEER 175

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           +   +  N GF D  R  H     Y++W Y  +S +KNKG RID+ M++     +L  AR
Sbjct: 176 EWMTRFLNEGFIDTFRLLHPDKQEYTWWSYRFNSRAKNKGWRIDYCMVNESVRPMLKDAR 235

Query: 241 IDTKPRGWTKPSDHTPVIVSL 261
           I          SDH P+++ +
Sbjct: 236 ILNDA----VHSDHCPMMLEI 252


>gi|307942540|ref|ZP_07657888.1| exodeoxyribonuclease III [Roseibium sp. TrichSKD4]
 gi|307774179|gb|EFO33392.1| exodeoxyribonuclease III [Roseibium sp. TrichSKD4]
          Length = 269

 Score =  192 bits (488), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 79/267 (29%), Positives = 124/267 (46%), Gaps = 9/267 (3%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETC 60
           + + + TWN+NS+R R+  +   + E  PD++CLQETK  D NFP +  ++  Y HI   
Sbjct: 3   NRLKLVTWNINSVRLRMPIVERLLAEVQPDVLCLQETKCPDANFPEKAFKAAGYNHIAIN 62

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           GQK Y+GVA +S+     +            +R I     +  Q +R+ N Y+P G    
Sbjct: 63  GQKGYHGVATVSRLPLSNVEKREFCQMG--DSRHIAVDVELAGQAVRVHNFYVPAGGDEP 120

Query: 121 STKYDDKISWIKRFLRFASQRLELE---EPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
             + +DK     +F+      L      +P +  GD N+ P  HD ++          T 
Sbjct: 121 DPEKNDKFDHKLKFMNEMKNWLTGPETAKPAVLVGDLNVAPYEHDVWSHKQLLKVVSHTP 180

Query: 178 EVRQSFQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATS 234
              + F+ ++          + T     LY++W Y A  WSK +KG R+DH+ +S    S
Sbjct: 181 IETELFEAVRESGNWLDAMRQFTPMEEKLYTWWSYRAKDWSKADKGRRLDHVWVSDPLKS 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261
            + S  +    RGW KPSDH PV+   
Sbjct: 241 AIKSTEVLRDARGWEKPSDHAPVVADF 267


>gi|153812982|ref|ZP_01965650.1| hypothetical protein RUMOBE_03389 [Ruminococcus obeum ATCC 29174]
 gi|149830929|gb|EDM86019.1| hypothetical protein RUMOBE_03389 [Ruminococcus obeum ATCC 29174]
          Length = 252

 Score =  192 bits (488), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 72/262 (27%), Positives = 111/262 (42%), Gaps = 13/262 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN IRA I        +E + DI CLQETK +      E L   + +     +
Sbjct: 1   MKCISWNVNGIRACITKGFEDRFRELDADIFCLQETKCQQGQVELE-LPGYHQYWNYANR 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           + Y+G A+ +K +PI +   +  ++ D + R I   F                   +   
Sbjct: 60  RGYSGTAVFTKKEPISVKNGIGIEEHDKEGRVITLEFKEFYFVTVYTPNSQSELRRLEYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +R       +L+  +P+I  GD N+  +  D  NP     +A FT E R  
Sbjct: 120 M------EWERDFLAYLLKLQESKPVICCGDLNVAHEEIDLKNPKTNRKNAGFTDEERAC 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F K+   GF D  R  +     +YS+W Y   +  KN G RID+ + SP     L  A I
Sbjct: 174 FTKVLESGFIDTFRYFYPDKEGIYSWWSYRFKAREKNAGWRIDYFITSPSLKEKLQGAAI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
            T+  G    SDH P+ + +D+
Sbjct: 234 HTEIMG----SDHCPIELDIDL 251


>gi|300870922|ref|YP_003785793.1| exodeoxyribonuclease [Brachyspira pilosicoli 95/1000]
 gi|300688621|gb|ADK31292.1| exodeoxyribonuclease [Brachyspira pilosicoli 95/1000]
          Length = 261

 Score =  192 bits (488), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 69/265 (26%), Positives = 106/265 (40%), Gaps = 9/265 (3%)

Query: 1   MSVVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           MS + + +WNVN IRA     L  +IK+ + DIICLQETK  ++  P +      Y +  
Sbjct: 1   MSTLKIISWNVNGIRAAYKKGLLDFIKKEDADIICLQETKAFEEQLPEDLRNIEGYQLFI 60

Query: 60  CGQKS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
                    G + ++ Y  ++    +                 +      I N+Y P+G 
Sbjct: 61  NPADPEIRKGYSGVAIYTKLKPNKEIKNKFGSKFTDREGRILALEFDDFTIFNVYFPNGG 120

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
                   +        +     +L+ +  +I  GD NI  +  D   P   E    F  
Sbjct: 121 KSEEHF--NYKLSFYDEMTKHMIKLKDKTNVILCGDMNIAHEAIDLARPKENEKSIGFLP 178

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
             R+   K  N GFTD  R        YS+WD    S  KN G RID+  ++ E ++ + 
Sbjct: 179 IERERITKFLNSGFTDTFRMFVKEGGHYSWWDMKTRSREKNVGWRIDYFFVNNEISNNIK 238

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLD 262
            A I T   G    SDH P+++  D
Sbjct: 239 RADILTDVLG----SDHCPILIEWD 259


>gi|254518588|ref|ZP_05130644.1| exodeoxyribonuclease III Xth [Clostridium sp. 7_2_43FAA]
 gi|226912337|gb|EEH97538.1| exodeoxyribonuclease III Xth [Clostridium sp. 7_2_43FAA]
          Length = 251

 Score =  192 bits (488), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 70/262 (26%), Positives = 119/262 (45%), Gaps = 13/262 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN IR+ +      + KE + DI C+QE+K ++     E L+  + +     +
Sbjct: 1   MKLISWNVNGIRSCVTKGFLEYFKEMDADIFCIQESKLQEGQIDLE-LEGYHQYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +P+ +   L  ++ D + R I   F                   +   
Sbjct: 60  KGYSGTAIFTKEKPLSVSYGLGIEEHDKEGRVITLEFENFYMVTVYTPNSKNELARLDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +   R   + L+ ++P+I  GD N+  +  D  NP     +A FT E R  
Sbjct: 120 M------VWEDAFRDYLKVLDEKKPVIVCGDLNVAHKEIDLKNPKTNLRNAGFTEEERSK 173

Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L N GF D  R  +      YS+W Y  ++ +KN G RID+ ++S      L  A+I
Sbjct: 174 FTELLNAGFVDTFRYFYPDEVGAYSWWSYRFNARAKNAGWRIDYFLVSNSVKDKLEDAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
            ++  G    SDH PV + +++
Sbjct: 234 HSEVLG----SDHCPVELKINL 251


>gi|71892211|ref|YP_277944.1| exonuclease III [Candidatus Blochmannia pennsylvanicus str. BPEN]
 gi|71796317|gb|AAZ41068.1| exonuclease III [Candidatus Blochmannia pennsylvanicus str. BPEN]
          Length = 268

 Score =  192 bits (488), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 84/268 (31%), Positives = 120/268 (44%), Gaps = 8/268 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR+H L A I +  PD+I LQET+  D  FP + +    YH+   GQK
Sbjct: 1   MKFVSFNINGLRARMHQLNAIIFQLKPDVIGLQETRVHDDFFPVKEILQHGYHVYYYGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122
            Y+GVA+  +  P+ +   L  DD   Q R I A       TL I N Y P G       
Sbjct: 61  KYHGVALFLRQTPLTVTRGLTDDDNLSQKRIIMADIMTPIGTLTIINGYFPQGENKNHPE 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACFT 176
           K+  K ++ K F  +          L+  GD NI P   D           I      F 
Sbjct: 121 KFMYKKNFYKSFQNYVEHTYHSHSLLLIMGDMNISPTDFDIGIGEKNKKRWIASGRCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHL-YSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R    +L + G  D  R  H  +   YS++ Y +  + KN G+RID I+ +    + 
Sbjct: 181 PEERTWINRLMSWGLVDIYRNMHPQNDERYSWFSYRSHGFYKNNGLRIDLILATRPLANR 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             ++ I    R   +PSDH PV V  DI
Sbjct: 241 CKNSDISYDIRRMQRPSDHAPVWVDFDI 268


>gi|262067405|ref|ZP_06027017.1| exodeoxyribonuclease III [Fusobacterium periodonticum ATCC 33693]
 gi|291378968|gb|EFE86486.1| exodeoxyribonuclease III [Fusobacterium periodonticum ATCC 33693]
          Length = 253

 Score =  192 bits (488), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 77/261 (29%), Positives = 114/261 (43%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN IRA I      +  E N DI CLQETK        E L+  + +     +
Sbjct: 1   MKLISWNVNGIRAAIKKGFLDYFNEQNADIFCLQETKLSAGQLDLE-LKGYHQYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +P+ +   L  ++ D + R I   F                   +   
Sbjct: 60  KGYSGTAIFTKEEPLSVSYGLGIEEHDKEGRVITLEFEKFYMITVYTPNSKDELQRLDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +   R   + LE ++P++  GD N+  +  D  NP     +A FT E R  
Sbjct: 120 M------VWEDEFRKYLKNLEKKKPVVVCGDLNVAHKEIDLKNPKTNRRNAGFTDEERGK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L   GFTD  R  +    H YS+W Y A++   N G RID+ ++S      L  A I
Sbjct: 174 FTELLESGFTDTFRYFYPDLEHAYSWWSYRANARKNNTGWRIDYFIVSKALDKYLVDAEI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
             +  G    SDH PV++ LD
Sbjct: 234 HAQTEG----SDHCPVVLFLD 250


>gi|326795198|ref|YP_004313018.1| exodeoxyribonuclease III [Marinomonas mediterranea MMB-1]
 gi|326545962|gb|ADZ91182.1| exodeoxyribonuclease III [Marinomonas mediterranea MMB-1]
          Length = 268

 Score =  192 bits (488), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 84/267 (31%), Positives = 122/267 (45%), Gaps = 9/267 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V ++N+N +RAR H +AA ++++ PD+I LQE K  D  FP E  +  +YH    GQK
Sbjct: 1   MKVISFNINGLRARPHQIAALVEKHQPDVIGLQEIKVHDDAFPKEIPEEHSYHAYYYGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           S+ GVAI SK     +    P D+ D Q R I ATF      +++ N Y P G       
Sbjct: 61  SHYGVAIFSKQPATSVEYGFPTDEEDAQRRMIIATFDTENGPVKVINGYFPQGESRDHET 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACFTL 177
                      L         +E +I  GD NI P   D           +      F  
Sbjct: 121 KFPAKRKFYADLMAYLASHSKDEKIIVMGDVNISPTDLDIGIGEKNAKRWLKTGKCSFLP 180

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHL-YSFWDYYADSWSK--NKGIRIDHIMLSPEATS 234
           E R+ F  L + GF D  R+ +   +  +S++DY +  +     +G+RID I+ S    +
Sbjct: 181 EEREWFDALLDWGFVDTYRSQNPESNELFSWFDYRSKGFEDTPKRGLRIDVILASNGLIN 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261
            L +  ID   RG  KPSDH P+  S 
Sbjct: 241 QLEATGIDYDIRGIEKPSDHAPIWASF 267


>gi|218130897|ref|ZP_03459701.1| hypothetical protein BACEGG_02492 [Bacteroides eggerthii DSM 20697]
 gi|217987241|gb|EEC53572.1| hypothetical protein BACEGG_02492 [Bacteroides eggerthii DSM 20697]
          Length = 254

 Score =  192 bits (488), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 80/261 (30%), Positives = 136/261 (52%), Gaps = 12/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60
           + + T+NVN +RA +   L  W+    PD++CLQETK + + +P E L +L Y  ++ + 
Sbjct: 1   MKIITYNVNGLRAAVTKGLPEWLANEQPDVLCLQETKLQPEQYPAEALDALGYKHYLYSA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GVAIL+K +P  +   +  ++ D + RF+ A +      L I ++Y P G    
Sbjct: 61  RKKGYSGVAILTKREPDHVEYGMGMEEYDSEGRFMRADYG----DLSIVSVYHPSG-TSG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   K+ W+++F ++  +       LI  GDYNI  +  D ++P+    ++ F  E R
Sbjct: 116 DERQAFKMVWLEKFRQYVVELQRTRPKLILCGDYNICHEAIDIHDPVRNATNSGFLPEER 175

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           +   +  N GF D  R  H     Y++W Y  +S +KNKG RID+ M++     +L  AR
Sbjct: 176 EWMTRFLNEGFIDTFRLLHPDKQEYTWWSYRFNSRAKNKGWRIDYCMVNEPVRPMLKDAR 235

Query: 241 IDTKPRGWTKPSDHTPVIVSL 261
           I          SDH P+++ +
Sbjct: 236 ILNDA----VHSDHCPMMLEI 252


>gi|110639863|ref|YP_680073.1| exodeoxyribonuclease III [Cytophaga hutchinsonii ATCC 33406]
 gi|110282544|gb|ABG60730.1| exodeoxyribonuclease III [Cytophaga hutchinsonii ATCC 33406]
          Length = 254

 Score =  192 bits (488), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 81/261 (31%), Positives = 124/261 (47%), Gaps = 12/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60
           + + T+NVN IRA I   L  W+K  N D++C QE K     F  E+ ++L Y  +    
Sbjct: 1   MKIITYNVNGIRAAITKGLLTWVKATNADVLCFQEIKASVDQFDVESFKALGYTTYAFPA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GVAI +K  P+ +      +  D + R I A +        + N+Y+P G+   
Sbjct: 61  QKKGYSGVAICTKEIPVHVEYGCGIEKYDFEGRVIRADYPT----FSVMNVYMPSGS-SG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   K  W+  FL + S+  +    LI  GDYNI  +  D +NP      + F  E R
Sbjct: 116 DDRQAFKFGWMDDFLLYISEVRKKIPNLIVCGDYNICHKAIDIHNPKSNAKTSGFLPEER 175

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           +   K  + GF DA R  ++  H Y++W Y A S  KN G RID+  ++ E    L  + 
Sbjct: 176 EWMSKFFDSGFVDAFRHFNEEPHHYTWWSYRAGSRGKNLGWRIDYHSVTQEMVGKLKRSV 235

Query: 241 IDTKPRGWTKPSDHTPVIVSL 261
           I          SDH PV++ +
Sbjct: 236 ILPDA----IHSDHCPVLLEI 252


>gi|238897851|ref|YP_002923530.1| exonuclease III [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
           pisum)]
 gi|229465608|gb|ACQ67382.1| exonuclease III [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
           pisum)]
          Length = 268

 Score =  192 bits (487), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 86/268 (32%), Positives = 131/268 (48%), Gaps = 8/268 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RA  H LAA I++++P +I LQETK  D  FP E ++   YH+   GQK
Sbjct: 1   MKFVSFNINGLRAHPHQLAAIIEKHDPHLIGLQETKVHDDMFPLEEVRRHGYHVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122
            + GVA+L+K  P+ I    P D  D Q R I A       T+ + N Y P G       
Sbjct: 61  GHYGVALLTKDSPLAIRRGFPTDQEDAQRRIIMADLKTPQGTITVINGYFPQGESRLHPT 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE------NDACFT 176
           K+  K  + +   R+ +Q   ++  ++  GD+NI P   D                  F 
Sbjct: 121 KFPAKARFYEDLHRYLTQHFSVQSHVLIMGDFNICPTDGDIGIGEQNRKRWLSSGKCAFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R  F+ LQ+ G  D  R  +    H YS++DY +  + +N+G+RID ++ S     L
Sbjct: 181 PEERAWFEHLQSWGLIDLFRVAYPDYEHQYSWFDYRSKGFDENRGLRIDLLLASVPLARL 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             ++ ID + RG  KPSDH PV     +
Sbjct: 241 AINSGIDYEIRGMEKPSDHAPVWSEFKL 268


>gi|331085596|ref|ZP_08334680.1| exodeoxyribonuclease [Lachnospiraceae bacterium 9_1_43BFAA]
 gi|330407483|gb|EGG86985.1| exodeoxyribonuclease [Lachnospiraceae bacterium 9_1_43BFAA]
          Length = 250

 Score =  192 bits (487), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 71/261 (27%), Positives = 115/261 (44%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN IRA +      + KE + DI C+QE+K ++     E L+  +       +
Sbjct: 1   MKFISWNVNGIRACVQKGFLDFFKEADADIFCIQESKMQEGQLKLE-LEGYHQFWNYAER 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +P+ +   +  ++ D + R I   F                   +   
Sbjct: 60  KGYSGTAIFTKQEPLSVAYGIGMEEHDKEGRVITLEFEEFYFVTVYTPNSQNELARLDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
              +             ++LE ++P+IF GD N+  +  D  NP   + +A FT E R  
Sbjct: 120 MQWETEFLKY------LKKLEAKKPVIFCGDLNVAHREIDLKNPKTNQKNAGFTDEERGK 173

Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L + GF D  R  +     +YS+W Y   + +KN G RID+  +S      L  A+I
Sbjct: 174 FTELLSAGFIDTFRYFYPEQEGIYSWWSYRFSARAKNAGWRIDYFCVSECLKDRLRDAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            T   G    SDH PV +  +
Sbjct: 234 LTDVMG----SDHCPVELDFE 250


>gi|237738747|ref|ZP_04569228.1| exodeoxyribonuclease III [Fusobacterium sp. 2_1_31]
 gi|294781992|ref|ZP_06747324.1| exodeoxyribonuclease III [Fusobacterium sp. 1_1_41FAA]
 gi|229423850|gb|EEO38897.1| exodeoxyribonuclease III [Fusobacterium sp. 2_1_31]
 gi|294481803|gb|EFG29572.1| exodeoxyribonuclease III [Fusobacterium sp. 1_1_41FAA]
          Length = 253

 Score =  192 bits (487), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 76/261 (29%), Positives = 113/261 (43%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN IRA I      +  E N DI CLQETK        E L+  + +     +
Sbjct: 1   MKLISWNVNGIRAAIKKGFLDYFNEQNADIFCLQETKLSAGQLDLE-LKGYHQYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +P+ +   L  ++ D + R I   F                   +   
Sbjct: 60  KGYSGTAIFTKEEPLSVSYGLGIEEHDKEGRVITLEFEKFYMITVYTPNSKDELLRLDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +   R   + LE ++P++  GD N+  +  D  NP     +A FT E R  
Sbjct: 120 M------VWEDEFRKYLKNLEKKKPVVVCGDLNVAHKEIDLKNPKTNRRNAGFTDEERGK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L   GF D  R  +    H YS+W Y A++   N G RID+ ++S      L  A I
Sbjct: 174 FTELLESGFIDTFRYFYPDLEHAYSWWSYRANARKNNTGWRIDYFVVSKALEKYLVDAEI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
             +  G    SDH PV++ LD
Sbjct: 234 HAQTEG----SDHCPVVLFLD 250


>gi|150017217|ref|YP_001309471.1| exodeoxyribonuclease III Xth [Clostridium beijerinckii NCIMB 8052]
 gi|149903682|gb|ABR34515.1| exodeoxyribonuclease III Xth [Clostridium beijerinckii NCIMB 8052]
          Length = 254

 Score =  192 bits (487), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 70/265 (26%), Positives = 124/265 (46%), Gaps = 13/265 (4%)

Query: 1   MSVVTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           M +  + +WNVN +RA +      + KE + DI C+QE+K ++     E L     +   
Sbjct: 1   MKLKKLISWNVNGLRACVKKGFLEYFKEIDADIFCIQESKLQEGQIDLE-LDGYTSYWNY 59

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G A+ +K +P+ +   +  ++ D + R +   +        + N+Y P+    
Sbjct: 60  AEKKGYSGTAVFTKEEPLTVKRGIGIEEHDNEGRVLTLEYG----NFYLVNVYTPNSKQ- 114

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              + D ++ W     R   + LE  +P+I  GD N+  +  D  NP     +A FT E 
Sbjct: 115 GLERLDYRMVWE-DVFRKYLKELEKNKPVIICGDLNVAHKEIDLKNPTSNRKNAGFTDEE 173

Query: 180 RQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R    +L   GF D  R  +     +YS+W Y  ++ + N G RID+ ++S      L  
Sbjct: 174 RSKISELLEAGFIDTYRYFYPDKEGMYSWWSYRFNARANNAGWRIDYFLVSESLKDKLED 233

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263
           A+I  +  G    SDH PV +++++
Sbjct: 234 AKIHMEVTG----SDHCPVELTINL 254


>gi|227505913|ref|ZP_03935962.1| exonuclease III [Corynebacterium striatum ATCC 6940]
 gi|227197435|gb|EEI77483.1| exonuclease III [Corynebacterium striatum ATCC 6940]
          Length = 269

 Score =  192 bits (487), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 78/267 (29%), Positives = 135/267 (50%), Gaps = 8/267 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+NS+R R+      + +++ D++CLQETK  D  FP    ++  YH+   G  
Sbjct: 1   MRIATWNINSVRTRVQRAVDLLAKHDIDVLCLQETKVADDKFPVMDFEAAGYHVTHHGLN 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDD-----LDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
            +NGVAI+SK +P E+ T  PG        +              + + I +LY+P+G  
Sbjct: 61  QWNGVAIVSKSEPEEVFTSFPGQPGFAKDPEKPQNLEARAVGARIRGVEIWSLYVPNGRE 120

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
           IT   Y  K+ ++    R+A  R + +  L+  GD+NI P+  D ++   +      T  
Sbjct: 121 ITDRHYAYKLQFLYALARYAESRAQSK--LLLTGDFNIAPRDEDVWDIEAFRGKTHVTEP 178

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
            R +FQ L+  G  +  R   +    ++++DY +  + KN+G+RID  + S    + + S
Sbjct: 179 ERAAFQMLEEAGLEEVTRRFTE-EQRWTYFDYKSLRFQKNEGMRIDFQLASRSLAATVQS 237

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           A++D   R   K SDH  ++   D+P+
Sbjct: 238 AQVDMVERAGDKTSDHCLLLADYDLPD 264


>gi|313676472|ref|YP_004054468.1| exodeoxyribonuclease iii [Marivirga tractuosa DSM 4126]
 gi|312943170|gb|ADR22360.1| exodeoxyribonuclease III [Marivirga tractuosa DSM 4126]
          Length = 255

 Score =  192 bits (487), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 82/264 (31%), Positives = 126/264 (47%), Gaps = 12/264 (4%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC-- 60
           + + ++NVN IRA     L+ W++E  PD+ CLQE K    +      ++L YHI     
Sbjct: 1   MNIISYNVNGIRAAERKGLSQWLEEEKPDVFCLQELKANRSDVDLSVFENLGYHIYWHSA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GV I +K +P  +      D  D + R I A F        + N Y+P G+   
Sbjct: 61  EKKGYSGVGIFTKVKPNNVEIGCNMDIYDREGRVIRADFE----NFSVLNTYMPSGS-SG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             + D K+ W+  F  +     +    L+  GDYNI  Q  D ++P+  +N + F  E R
Sbjct: 116 DPRQDFKMQWLSDFRAYIQDLKQEIPNLLICGDYNICHQAIDIHDPVRNKNSSGFLPEER 175

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           +      N GF D+ R  +     YS+W Y + +  +NKG RID+ M+S    + L +A 
Sbjct: 176 EWMTDFLNDGFIDSFRHLNKEPDQYSWWSYRSAARERNKGWRIDYHMISENLKNQLKAAD 235

Query: 241 IDTKPRGWTKPSDHTPVIVSLDIP 264
           I        K SDH P+ V LD+ 
Sbjct: 236 ILQDV----KHSDHCPIKVELDVS 255


>gi|291543155|emb|CBL16265.1| exodeoxyribonuclease III [Ruminococcus bromii L2-63]
          Length = 252

 Score =  192 bits (487), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 75/261 (28%), Positives = 122/261 (46%), Gaps = 13/261 (4%)

Query: 5   TVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
            + +WNVN +RA +      + K+ + DI CLQETK ++       L+  + +     +K
Sbjct: 3   KLISWNVNGLRACVTKGFENFFKDVDADIFCLQETKLQEGQIDL-LLEGYHQYWCYADKK 61

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            Y+G A+ +K +P+ +   +  D+ D + R I A F                 +     +
Sbjct: 62  GYSGTAMFTKEEPLNVCYGIGIDEHDHEGRVITAEFDNC-----FVVTCYTPNSQSELKR 116

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
            D ++ W   F  +  + LE ++P+I  GD N+  +  D  NP     +A FT E R   
Sbjct: 117 LDYRMKWEDDFKAYLKK-LEEKKPVIMCGDLNVAHKEIDLKNPKTNRKNAGFTDEERSKM 175

Query: 184 QKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
             L + GF D  R  +     +YS+W Y   +  KN G RID+ ++S    S L  A+I 
Sbjct: 176 TALLDDGFIDTYRYFYPDTEGVYSWWSYRFKAREKNAGWRIDYFIVSKALESKLDGAKIH 235

Query: 243 TKPRGWTKPSDHTPVIVSLDI 263
           T+  G    SDH PV +++DI
Sbjct: 236 TEILG----SDHCPVELTIDI 252


>gi|149909989|ref|ZP_01898638.1| exodeoxyribonuclease III [Moritella sp. PE36]
 gi|149807003|gb|EDM66962.1| exodeoxyribonuclease III [Moritella sp. PE36]
          Length = 274

 Score =  192 bits (487), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 75/273 (27%), Positives = 128/273 (46%), Gaps = 15/273 (5%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +RAR+H L A I +++PD+I LQE K  ++ FP   ++ + YH+   GQK
Sbjct: 1   MKIISFNINGLRARLHQLQAIIDKHSPDVIGLQEIKVHNEMFPIAAVEDMGYHVFFHGQK 60

Query: 64  SYNGVAILSKYQP------IEIVTHLPGDDLD-VQARFIEATFTINTQTLRIGNLYLPHG 116
           ++ GVA++ K         I++    P DD +  +   +      + + + + N Y P G
Sbjct: 61  AHYGVAMMVKKSTIADVEAIKVQYGFPTDDEEAQKRMIMVTFEQTSGKPITVLNGYFPQG 120

Query: 117 NPITS-TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIW 169
             I+  TKY  K  + +    + +     E+ LI  GD NI P               + 
Sbjct: 121 ENISHETKYPYKRKFYQDLNIYLNDNHTAEDDLIVMGDINISPADKDIGIGEPNAKRWLK 180

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIML 228
                F  E R+   KLQ  G  D  R         YS++DY +  +  N+G+RID I+ 
Sbjct: 181 TGKCSFQPEEREWLAKLQGFGLHDTFRTIKPEVSDRYSWFDYRSKGFPDNRGLRIDVILA 240

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           +    + +  + +D + R   KPSDH P+  + 
Sbjct: 241 TATLNAKVVESDVDYELRAIEKPSDHAPIWTTF 273


>gi|237807677|ref|YP_002892117.1| exodeoxyribonuclease III [Tolumonas auensis DSM 9187]
 gi|237499938|gb|ACQ92531.1| exodeoxyribonuclease III [Tolumonas auensis DSM 9187]
          Length = 268

 Score =  192 bits (487), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 75/267 (28%), Positives = 124/267 (46%), Gaps = 9/267 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +RAR H L A +++++PDII LQETK  D  FP   ++ L Y +   GQK
Sbjct: 1   MKIISFNINGLRARPHQLQAIVEQHHPDIIGLQETKVHDDAFPVSIIEELGYQVHFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           ++ GVA+LS+  P  ++   P  D+   +   I      N + L + N Y P G      
Sbjct: 61  AHYGVALLSRKTPDAVIKGFPEDDEESQRRLIIGRFMQENGRLLTVFNGYFPQGESRDHP 120

Query: 123 K-YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175
             +  K  + +  L +  Q    +E ++  GD NI                 +      F
Sbjct: 121 IKFPAKQKFYRDLLNYLQQNHTPDEDIVIMGDMNISSTDLDIGIGEANRKRWLQTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R+   +L   GF D  R+ +   +  +S++DY +  +  N+G+RID ++ +     
Sbjct: 181 LPEEREWLNELLAWGFVDTWRSQNPDSNEHFSWFDYRSRGFDDNRGLRIDLLLATSVLQQ 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261
            L    ID + RG  KPSDH P+    
Sbjct: 241 RLQQTGIDYEIRGMEKPSDHAPIWAEF 267


>gi|261880757|ref|ZP_06007184.1| exodeoxyribonuclease III [Prevotella bergensis DSM 17361]
 gi|270332533|gb|EFA43319.1| exodeoxyribonuclease III [Prevotella bergensis DSM 17361]
          Length = 267

 Score =  192 bits (487), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 69/273 (25%), Positives = 118/273 (43%), Gaps = 19/273 (6%)

Query: 4   VTVATWNVNSIRARIH------------NLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51
           +   +WNVN +RA +                A+  E + D  CLQETK +      +   
Sbjct: 1   MKFVSWNVNGLRACVKPKVDAEGNVISKGFEAYFNELDADFFCLQETKMQAGQLDLQ-FN 59

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGN 110
               +     +K Y+G AI +K++P+ +   +  ++ D + R I   +       +   N
Sbjct: 60  GYRSYWNYAERKGYSGTAIYTKHEPMNVACGMGIEEHDNEGRVITLEYPEFYLVNVYTPN 119

Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170
                   +   +   ++ W + F  +  + L   +P+I  GD N+  Q  D  N     
Sbjct: 120 SQESLPGEVKPKRLGYRMKWEEDFRAYIKR-LNETKPVIVCGDLNVAHQEIDIKNAKTNR 178

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230
           N+A FT E R+    L + GF D  R  +    +YS+W Y   +  +N G RID+ ++S 
Sbjct: 179 NNAGFTDEEREKMTILLDNGFIDTFRTMYPEQVIYSWWSYRFRARERNTGWRIDYFLVSE 238

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              + +  ARI T+  G    SDH PV + L++
Sbjct: 239 RLRNQIVDARIHTEIYG----SDHCPVELELNL 267


>gi|126698940|ref|YP_001087837.1| putative exodeoxyribonuclease [Clostridium difficile 630]
 gi|254974886|ref|ZP_05271358.1| putative exodeoxyribonuclease [Clostridium difficile QCD-66c26]
 gi|255092273|ref|ZP_05321751.1| putative exodeoxyribonuclease [Clostridium difficile CIP 107932]
 gi|255100359|ref|ZP_05329336.1| putative exodeoxyribonuclease [Clostridium difficile QCD-63q42]
 gi|255306301|ref|ZP_05350472.1| putative exodeoxyribonuclease [Clostridium difficile ATCC 43255]
 gi|255314013|ref|ZP_05355596.1| putative exodeoxyribonuclease [Clostridium difficile QCD-76w55]
 gi|255516693|ref|ZP_05384369.1| putative exodeoxyribonuclease [Clostridium difficile QCD-97b34]
 gi|255649791|ref|ZP_05396693.1| putative exodeoxyribonuclease [Clostridium difficile QCD-37x79]
 gi|306519893|ref|ZP_07406240.1| putative exodeoxyribonuclease [Clostridium difficile QCD-32g58]
 gi|115250377|emb|CAJ68199.1| Exodeoxyribonuclease [Clostridium difficile]
          Length = 250

 Score =  191 bits (486), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 73/261 (27%), Positives = 118/261 (45%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN IRA +      + KE + DI CLQETK ++     + L     +     +
Sbjct: 1   MKFISWNVNGIRACVGKGFLDFFKEVDADIFCLQETKLQEGQIELD-LPGYFQYWNYAER 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +P++++  +  ++ D + R I   F           +Y P+       
Sbjct: 60  KGYSGTAIFTKKEPLKVMYGINIEEHDKEGRVITLEFE----DFYFVTVYTPNSQSELKR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
              +  +  +        +L+  +P+I  GD N+  +  D  NP     +A FT E R+ 
Sbjct: 116 L--EYRTRWEDDFIDYLTKLDNHKPVIVCGDMNVAHKEIDLKNPKNNMKNAGFTKEEREK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F KL + GF D  R  +     +YS+W Y  ++   N G RID+   S +    L SA I
Sbjct: 174 FSKLLDSGFIDTYRYFNPDKEGVYSWWSYRFNARKNNAGWRIDYFCASKKLEDRLVSADI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            T+  G    SDH PV + + 
Sbjct: 234 HTEILG----SDHCPVELEIK 250


>gi|166030570|ref|ZP_02233399.1| hypothetical protein DORFOR_00233 [Dorea formicigenerans ATCC
           27755]
 gi|166029572|gb|EDR48329.1| hypothetical protein DORFOR_00233 [Dorea formicigenerans ATCC
           27755]
          Length = 250

 Score =  191 bits (486), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 74/261 (28%), Positives = 112/261 (42%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN IRA        + +E + DI C+QETK ++     +T    + +     +
Sbjct: 1   MKFISWNVNGIRACAGKGFMDFFQETDADIFCIQETKMQEGQLELDT-PGYHQYWNYAKK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +PI +   L  ++ D + R I   F                   +   
Sbjct: 60  KGYSGTAIFTKQEPISVSYGLGIEEHDQEGRVITLEFEDFYFITVYTPNSQSELARLDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +       ++LE  +P+IF GD N+     D  NP     +A FT E RQ 
Sbjct: 120 M------KWEEDFLTYLKKLEETKPVIFCGDLNVAHTEIDLKNPKTNRKNAGFTDEERQK 173

Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L N GF D  R  +     +YS+W Y   + +KN G RID+  +S      L  A+I
Sbjct: 174 FTELLNAGFVDTFRYFYPEQTGIYSWWSYRFSARAKNAGWRIDYFCVSESLKDRLEDAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            T   G    SDH PV + + 
Sbjct: 234 LTDIMG----SDHCPVELDIK 250


>gi|253580808|ref|ZP_04858071.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251847878|gb|EES75845.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 251

 Score =  191 bits (486), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 71/262 (27%), Positives = 113/262 (43%), Gaps = 13/262 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN IRA I           + DI CLQETK +      E L     +     +
Sbjct: 1   MKLISWNVNGIRACIGKGFEESFAALDADIFCLQETKCQQGQVKLE-LPGYYQYWNYANR 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           + Y+G A+ +K +P+ +V  +  +  D + R I   +        +  +Y P+       
Sbjct: 60  RGYSGTAVFTKKEPLSVVYGIGIEKHDKEGRVITLEYE----KFYLVTVYTPNSQSELRR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
              +     +        +L+  +P+I  GD+N+  Q  D  NP     +A FT E R  
Sbjct: 116 L--EYRMHWEEDFLAYLLKLQESKPVICCGDFNVAHQEIDLKNPKTNRKNAGFTDEERAC 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F K+   GF D  R  +      YS+W Y   +  KN G RID+ + SP+    L  A I
Sbjct: 174 FGKVLESGFIDTFRYFYPDVEGRYSWWSYRFKAREKNAGWRIDYFITSPQLKDKLKGAEI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
            ++  G    SDH PV + + +
Sbjct: 234 HSEIMG----SDHCPVELQITL 251


>gi|325660677|ref|ZP_08149307.1| exodeoxyribonuclease [Lachnospiraceae bacterium 4_1_37FAA]
 gi|325473038|gb|EGC76246.1| exodeoxyribonuclease [Lachnospiraceae bacterium 4_1_37FAA]
          Length = 250

 Score =  191 bits (486), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 71/261 (27%), Positives = 114/261 (43%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN IRA +      + KE + DI C+QE+K ++     E L+  +       +
Sbjct: 1   MKFISWNVNGIRACVQKGFLDFFKEADADIFCIQESKMQEGQLKLE-LEGYHQFWNYAER 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +P+ +   +  ++ D + R I   F                   +   
Sbjct: 60  KGYSGTAIFTKQEPLSVAYGIGMEEHDKEGRVITLEFEEFYFVTVYTPNSQNELARLDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
              +             ++LE ++P+IF GD N+  +  D  NP     +A FT E R  
Sbjct: 120 MQWETEFLKY------LKKLEAKKPVIFCGDLNVAHREIDLKNPKTNRKNAGFTDEERGK 173

Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L + GF D  R  +     +YS+W Y   + +KN G RID+  +S      L  A+I
Sbjct: 174 FTELLSAGFIDTFRYFYPEQEGIYSWWSYRFSARAKNAGWRIDYFCVSECLKDRLRDAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            T   G    SDH PV +  +
Sbjct: 234 LTDVMG----SDHCPVELDFE 250


>gi|182416804|ref|ZP_02948195.1| exodeoxyribonuclease III [Clostridium butyricum 5521]
 gi|237669009|ref|ZP_04528993.1| exodeoxyribonuclease III [Clostridium butyricum E4 str. BoNT E
           BL5262]
 gi|182379266|gb|EDT76765.1| exodeoxyribonuclease III [Clostridium butyricum 5521]
 gi|237657357|gb|EEP54913.1| exodeoxyribonuclease III [Clostridium butyricum E4 str. BoNT E
           BL5262]
          Length = 254

 Score =  191 bits (486), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 71/265 (26%), Positives = 121/265 (45%), Gaps = 13/265 (4%)

Query: 1   MSVVTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           M++  + +WNVN +RA +      +  E + DI C+QETK ++     E L+    +   
Sbjct: 1   MTLKKLISWNVNGLRACVKKGFLDYFNEMDADIFCVQETKLQEGQIDLE-LEGYYDYWNY 59

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G A+ +K +PI +   L  ++ D + R I   +       +   + +   N  
Sbjct: 60  AEKKGYSGTAVFTKEKPISVKMGLGIEEHDNEGRVITLEYD------KFFLVNVYTPNSQ 113

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                 +     +   R   + LE  +P+I  GD N+  +  D  NP     +A F+ E 
Sbjct: 114 QKLARLEYRMSWEDVFRNYLKDLEKNKPVILCGDLNVAHKEIDLKNPSSNRKNAGFSDEE 173

Query: 180 RQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R    +L N GFTD  R  +     +YS+W Y  ++ + N G RID+ ++S      L  
Sbjct: 174 RSKMSELLNSGFTDTFRYFYPDIEGVYSWWSYRFNARANNAGWRIDYFIVSQSLNDKLED 233

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263
           A+I T   G    SDH PV + +++
Sbjct: 234 AKIHTSIEG----SDHCPVELEINL 254


>gi|260682949|ref|YP_003214234.1| putative exodeoxyribonuclease [Clostridium difficile CD196]
 gi|260686547|ref|YP_003217680.1| putative exodeoxyribonuclease [Clostridium difficile R20291]
 gi|260209112|emb|CBA62286.1| putative exodeoxyribonuclease [Clostridium difficile CD196]
 gi|260212563|emb|CBE03542.1| putative exodeoxyribonuclease [Clostridium difficile R20291]
          Length = 255

 Score =  191 bits (486), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 73/261 (27%), Positives = 118/261 (45%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN IRA +      + KE + DI CLQETK ++     + L     +     +
Sbjct: 6   MKFISWNVNGIRACVGKGFLDFFKEVDADIFCLQETKLQEGQIELD-LPGYFQYWNYAER 64

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +P++++  +  ++ D + R I   F           +Y P+       
Sbjct: 65  KGYSGTAIFTKKEPLKVMYGINIEEHDKEGRVITLEFE----DFYFVTVYTPNSQSELKR 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
              +  +  +        +L+  +P+I  GD N+  +  D  NP     +A FT E R+ 
Sbjct: 121 L--EYRTRWEDDFIDYLTKLDNHKPVIVCGDMNVAHKEIDLKNPKNNMKNAGFTKEEREK 178

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F KL + GF D  R  +     +YS+W Y  ++   N G RID+   S +    L SA I
Sbjct: 179 FSKLLDSGFIDTYRYFNPDKEGVYSWWSYRFNARKNNAGWRIDYFCASKKLEDRLVSADI 238

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            T+  G    SDH PV + + 
Sbjct: 239 HTEILG----SDHCPVELEIK 255


>gi|21229250|ref|NP_635172.1| exodeoxyribonuclease III [Methanosarcina mazei Go1]
 gi|20907825|gb|AAM32844.1| Exodeoxyribonuclease III [Methanosarcina mazei Go1]
          Length = 258

 Score =  191 bits (486), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 69/260 (26%), Positives = 116/260 (44%), Gaps = 12/260 (4%)

Query: 6   VATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETCGQ 62
           + +WNVN +RA +       + E+  DI+C+QETK      P E      Y+    +  Q
Sbjct: 7   LISWNVNGLRAAVKKGFLDLLLEHRFDIVCVQETKVSQDKLPREVKNIQGYYNYFVSAEQ 66

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
             Y+GV   SK +PI++   +  +  D + RF+   +        + N+Y P+G   +  
Sbjct: 67  NGYSGVGTFSKNKPIKLEKGMGIEVFDREGRFLRTDYE----DFVLLNIYFPNGK-ASQE 121

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +   K+++   FL +A+      + L+  GD N   +  D   P   E  + F  E R  
Sbjct: 122 RLGYKMAFYDAFLDYANALKSEGKKLVICGDVNTAHKEIDLARPKQNEMISGFLPEERAW 181

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
             K    G+ D+ R  +     YS+W     + S+N G R+D++ +S      + SA I 
Sbjct: 182 MDKFLAAGYLDSFRMFNPEGGNYSWWSMRTGARSRNVGWRLDYVFVSENLRENVKSASIY 241

Query: 243 TKPRGWTKPSDHTPVIVSLD 262
            +  G    SDH PV + L+
Sbjct: 242 PEIMG----SDHCPVGLELE 257


>gi|114778638|ref|ZP_01453454.1| exodeoxyribonuclease III xth [Mariprofundus ferrooxydans PV-1]
 gi|114551103|gb|EAU53664.1| exodeoxyribonuclease III xth [Mariprofundus ferrooxydans PV-1]
          Length = 252

 Score =  191 bits (486), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 81/259 (31%), Positives = 138/259 (53%), Gaps = 7/259 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + TWNVNS+  R+ ++ A++++  PD++ LQETKT D  FP   L++  Y +   GQK
Sbjct: 1   MKITTWNVNSLNVRLPHVLAYLRDEQPDVLALQETKTPDAGFPVAELEAAGYKVIFSGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVA+L++    ++V  LPG D   +         +    + I     P+G  I S K
Sbjct: 61  TYNGVAMLARSSMQQVVNDLPGLDDPQRRLLAATIDGMRVVNVYI-----PNGQEIGSDK 115

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W++    F  + L+  + L+  GD+NI P   D ++P  W+     +   R+ F
Sbjct: 116 YAYKMRWLQALCDFLQEELKQHDRLVLLGDFNIAPADIDVHDPTRWQGKILCSEPEREFF 175

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             L  +G  D +R+ H    ++S+WDY   ++ +  G+RIDH++++      L +A +  
Sbjct: 176 STLLQLGLIDGVRSLHPEKEMFSWWDYRMSAYRRGWGVRIDHLLVTHALA--LSAAGVAV 233

Query: 244 KPRGWTKPSDHTPVIVSLD 262
           K R   +PSDH PV +  +
Sbjct: 234 KYRELDRPSDHAPVWIEFE 252


>gi|317056539|ref|YP_004105006.1| exodeoxyribonuclease III Xth [Ruminococcus albus 7]
 gi|315448808|gb|ADU22372.1| exodeoxyribonuclease III Xth [Ruminococcus albus 7]
          Length = 250

 Score =  191 bits (486), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 61/264 (23%), Positives = 108/264 (40%), Gaps = 18/264 (6%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60
           +   +WNVN  RA +      +    + DI C+QETK +             Y  +  + 
Sbjct: 1   MKFISWNVNGFRACLQKGFGDFFTAADADIFCIQETKMQPDQ---ADFSPEGYLKYFHSA 57

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+G A+ +K +P+E+   L G   D                  + N          
Sbjct: 58  VKKGYSGTAVYTKKEPLEVKFGLNGTHTDEGRVITCEFEDYYFVCCYVPNAQNELKRIDY 117

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +++         +R    +L+  +P+++ GD N+  +  D  NP     +A F+ E R
Sbjct: 118 RMEFE-------DDMRAYLSQLDKTKPVVYCGDLNVAHEEIDLKNPKSNAGNAGFSDEER 170

Query: 181 QSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
             F +L   GF D  R  +      YS+W Y  ++   N G RID+ ++S      +  +
Sbjct: 171 GKFTELLGAGFADTFRRLYPDKAGAYSWWSYRFNARKNNAGWRIDYFVVSERLMDKVKDS 230

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
           +I +   G    SDH PV + +++
Sbjct: 231 KILSDITG----SDHCPVELDIEL 250


>gi|57239110|ref|YP_180246.1| exodeoxyribonuclease III [Ehrlichia ruminantium str. Welgevonden]
 gi|58579057|ref|YP_197269.1| exodeoxyribonuclease III [Ehrlichia ruminantium str. Welgevonden]
 gi|57161189|emb|CAH58103.1| putative exodeoxyribonuclease [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58417683|emb|CAI26887.1| Exodeoxyribonuclease III [Ehrlichia ruminantium str. Welgevonden]
          Length = 278

 Score =  191 bits (486), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 92/278 (33%), Positives = 145/278 (52%), Gaps = 17/278 (6%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           ++ +ATWNVNSIR RI +L  W+ + N DI  LQE K  +  FP   ++SL Y+    GQ
Sbjct: 1   MLRIATWNVNSIRKRIDHLCTWLTDYNIDIALLQEIKCTNDQFPALEIKSLGYNYYVHGQ 60

Query: 63  KSYNGVAILSKYQPI-----------------EIVTHLPGDDLDVQARFIEATFTINTQT 105
           K+ NGVAI++KY  +                   +          ++R++E     N   
Sbjct: 61  KARNGVAIITKYPIVEEVVTNIFSLYGTSNVCCELGSEDFTYNCEESRYLECVILYNGIK 120

Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165
           +R+G++Y+P+G  + S  +  K+ +  +   + S  L+ EE  I  GDYN+ P P D Y+
Sbjct: 121 IRVGSIYVPNGQSVESDAFQYKLGFFDQLKEYMSFLLKKEEICILGGDYNVAPYPIDMYS 180

Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225
             I     C     R+ F+ + N GF DA R  ++    +++W+Y   SW +NKG+RID 
Sbjct: 181 YEIMNGKLCCHQFEREKFRSIINTGFFDAFRLLNNDKKQFTWWNYKFGSWQENKGLRIDM 240

Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           ++LSP+A   + S  +    RG   PSDH PV+  L++
Sbjct: 241 LLLSPQAMDKVSSCVVHDGLRGLNVPSDHVPVVCDLNL 278


>gi|256372492|ref|YP_003110316.1| exodeoxyribonuclease III Xth [Acidimicrobium ferrooxidans DSM
           10331]
 gi|256009076|gb|ACU54643.1| exodeoxyribonuclease III Xth [Acidimicrobium ferrooxidans DSM
           10331]
          Length = 258

 Score =  191 bits (486), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 77/259 (29%), Positives = 130/259 (50%), Gaps = 3/259 (1%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
            + +ATWNVNSIRARI  + AW +   PD++ LQETK     FP ++L SL YH+   G 
Sbjct: 2   TMRLATWNVNSIRARIELVVAWAERVAPDVLLLQETKVATDQFPADSLVSLGYHVTHWGT 61

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
            ++NGVA+L++  P E+          +      A            ++Y+P+G  +   
Sbjct: 62  GAWNGVAVLTREAPREVRYGTGFARAPLATEEPRALAVRLEAGW-FMSVYVPNGRALDDP 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
            Y  K++W+       +  +     ++  GD+N+ P  HD ++P   E     +L  R++
Sbjct: 121 HYVYKLTWLAELRAHLADLVADG--VVVGGDFNVAPSDHDVWDPSALEGATHVSLPERRA 178

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
              L  +G TD  RA H     +++WDY   ++ +  G+RID ++ S +    + +  +D
Sbjct: 179 LDALLGLGLTDVYRALHPDDPGFTWWDYRQGAFRRGMGMRIDLVLASEDIARNVVAVDVD 238

Query: 243 TKPRGWTKPSDHTPVIVSL 261
            + R   +PSDH P++V L
Sbjct: 239 IEARRAPRPSDHAPLVVDL 257


>gi|325261710|ref|ZP_08128448.1| exodeoxyribonuclease III [Clostridium sp. D5]
 gi|324033164|gb|EGB94441.1| exodeoxyribonuclease III [Clostridium sp. D5]
          Length = 250

 Score =  191 bits (485), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 69/261 (26%), Positives = 114/261 (43%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN IRA +      +  + + DI C+QETK ++     E L+  + +     +
Sbjct: 1   MKFISWNVNGIRACVQKGFLEFFSQADADIFCIQETKMQEGQLSLE-LEGYHQYWNYAVK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G A+ SK +P+ +V  +  ++ D + R I   +                   +   
Sbjct: 60  KGYSGTAVFSKIEPLSVVYGIGIEEHDQEGRVITLEYEDFYFVTVYTPNAQNELARLDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +   R   ++LE  +P++  GD N+  +  D  NP      A F+ E RQ 
Sbjct: 120 M------KWEDDFRAWLKKLEENKPVVVTGDMNVAHKEIDLKNPKTNRKSAGFSDEERQK 173

Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L + GF D  R  +     +YS+W Y   +  KN G RID+  +S      L  A I
Sbjct: 174 FTELLDAGFIDTFRYFYPDQEGIYSWWSYRFRAREKNAGWRIDYFCVSECLKDRLVDAGI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            T   G    SDH PV++ ++
Sbjct: 234 LTDIMG----SDHCPVVLEMN 250


>gi|296126298|ref|YP_003633550.1| exodeoxyribonuclease III Xth [Brachyspira murdochii DSM 12563]
 gi|296018114|gb|ADG71351.1| exodeoxyribonuclease III Xth [Brachyspira murdochii DSM 12563]
          Length = 257

 Score =  191 bits (485), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 75/265 (28%), Positives = 112/265 (42%), Gaps = 15/265 (5%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN IRA     L  +IK+ NPDIICLQETK  ++  P +      Y +     
Sbjct: 1   MKIISWNVNGIRAAYKKGLVDFIKKENPDIICLQETKAFEEQLPEDLRNIEGYELFINPA 60

Query: 63  KS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
                  Y+GVAI +K +P +++ +  G              ++      I N+Y P+G 
Sbjct: 61  DPEVKKGYSGVAIYTKLKPNKVIKNKLGSKFSDNEG---RILSLEFDDFTIFNVYFPNGG 117

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
                   +        +     +L+ +  +I  GD NI  +  D   P   E    F  
Sbjct: 118 KSEEHF--NYKLSFYDAITKHLTKLKSKTNVILCGDMNIAHEAIDLARPKENEKSIGFLP 175

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
           E R+   +  N GFTD  R        YS+WD    S  KN G RID+  ++ E    + 
Sbjct: 176 EEREKITEFLNKGFTDTFRMFVKEGGHYSWWDMKTRSREKNVGWRIDYFFVNNEIAQNIK 235

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLD 262
            A I T   G    SDH P+++  D
Sbjct: 236 RADIMTDVMG----SDHCPILIEWD 256


>gi|260061515|ref|YP_003194595.1| exodeoxyribonuclease [Robiginitalea biformata HTCC2501]
 gi|88785647|gb|EAR16816.1| exodeoxyribonuclease [Robiginitalea biformata HTCC2501]
          Length = 269

 Score =  191 bits (485), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 81/262 (30%), Positives = 127/262 (48%), Gaps = 14/262 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY---HIET 59
           + +A++NVN IRA I      W+    PD+ICLQETK   +    E  +   Y   +  +
Sbjct: 14  LKIASYNVNGIRAAIRKGFLDWLVLAGPDVICLQETKAMKEQLDLEAFEKAGYPYHYWFS 73

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GVAILS+ +P  +        +D + R I A F      + I +LYLP G  I
Sbjct: 74  AEKKGYSGVAILSRQRPDHVAYGTGIGYMDAEGRNIRADFGG----VSIMSLYLPSGTNI 129

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                D K+ ++  F  +          L+  GDYNI  +P D ++P+  +N + F    
Sbjct: 130 AR--LDHKLQYMADFQAYVDSLKREIPELVICGDYNICHRPIDIHDPVRNKNVSGFLPVE 187

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R+      + GF D+ R  +   H Y++W Y A + +KNKG R+D+ M+S      L  +
Sbjct: 188 REWIGNFIDSGFIDSFRHFNPDPHHYTWWTYRAGARAKNKGWRLDYGMVSRPLEDRLARS 247

Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261
            I  + R     SDH P+++ L
Sbjct: 248 VILPEAR----HSDHCPIMLEL 265


>gi|148271654|ref|YP_001221215.1| putative exonuclease III [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|147829584|emb|CAN00499.1| putative exonuclease III [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
          Length = 278

 Score =  191 bits (485), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 76/277 (27%), Positives = 124/277 (44%), Gaps = 10/277 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + VATWNVNSIR R+  +  W+   + D++ +QE K + + FP +  +   Y +   G  
Sbjct: 1   MRVATWNVNSIRTRVGRVVDWLVREDVDVLAMQEIKCKPEQFPMQAFEEAGYEVAVHGLS 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLD------VQARFIEATFTINTQTLRIGNLYLPHGN 117
            +NGVAI S+    ++VT   G           Q              +R+ +LY+P+G 
Sbjct: 61  QWNGVAIASRLPLEDVVTTFEGMPRFGKPDASGQPPLEARAMGATVAGVRLWSLYVPNGR 120

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACF 175
            +    Y  K+ W+          L  +        GD+N+ P   D ++P ++E     
Sbjct: 121 ALDDPHYSYKLEWLGALAADTRAWLASDPETPLALMGDWNVAPLDTDVWDPALFEGKTHT 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
           +   R +F    + G TD +R +      Y++WDY    + +N+G+RID I+ +     L
Sbjct: 181 SEPERAAFAAFLDAGLTDVVRPSIP--EGYTYWDYQQLRFPRNEGMRIDFILGNDRFQEL 238

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQD 272
           + S RI    R    PSDH PV V LD+       + 
Sbjct: 239 VGSPRIHRDERKGDGPSDHVPVAVDLDVETELDDDRP 275


>gi|307545625|ref|YP_003898104.1| exonuclease III [Halomonas elongata DSM 2581]
 gi|307217649|emb|CBV42919.1| exonuclease III [Halomonas elongata DSM 2581]
          Length = 277

 Score =  191 bits (485), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 73/275 (26%), Positives = 126/275 (45%), Gaps = 15/275 (5%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N IRAR+H L A ++ + P +I LQETK +D  FP E +++L Y +   GQK
Sbjct: 1   MRLVSFNINGIRARLHQLEALVERHRPAVIGLQETKVQDSEFPAEAVEALGYRVYYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVT-----HLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
            + GVA++   +               +D   +          + + L + N Y P G  
Sbjct: 61  GHYGVALMCCREQCPEPELVQRGFPDDEDDAQRRLIGVRLRGADGEPLTVWNGYFPQGEN 120

Query: 119 ITST-KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWEN 171
           I    K+  K  +  +      ++   +E L   GD+NI P   D           + E 
Sbjct: 121 IEHPVKFPHKRRFYAQLSSLLKEQHRPDERLAIMGDFNISPADIDIGIGESNRKRWLREG 180

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKN--KGIRIDHIML 228
              F  E R+    ++  G +D+ R  +      +S++DY +  + ++  +G+RID+I+ 
Sbjct: 181 KTSFQPEEREWLDAIKAWGLSDSYRDRYPEVDDRFSWFDYRSKGFDRDPKRGLRIDYILT 240

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +    + +  A ID   RG  KPSDH PV    D+
Sbjct: 241 TAPLATHIADAGIDYDLRGMEKPSDHAPVWTEFDL 275


>gi|299821801|ref|ZP_07053689.1| exodeoxyribonuclease III [Listeria grayi DSM 20601]
 gi|299817466|gb|EFI84702.1| exodeoxyribonuclease III [Listeria grayi DSM 20601]
          Length = 254

 Score =  191 bits (485), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 69/264 (26%), Positives = 117/264 (44%), Gaps = 12/264 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +    + + KE + DI C+QETK +      E L+  + +     +
Sbjct: 1   MRFISWNVNGLRAAVKKGFSDYFKEADADIFCVQETKLQAGQIELEGLEGYHDYWNYAVK 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G A+ +K +P+ +   LP D  + + R I   F                   +   
Sbjct: 61  KGYSGTAVFTKEEPLSVQYGLPEDVHNQEGRVITLEFPAFYFVTVYTPNSQAELKRLDYR 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    ++        L+ ++P++F GD N+  Q  D  NP     +  F+ + R  
Sbjct: 121 T------EWEQAFADHIIALDKQKPVVFCGDLNVAHQEIDLKNPKTNRKNPGFSDQERAM 174

Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L + GF D  R  +      YS+W Y  ++ S+N G RID+ ++S   +  +  ARI
Sbjct: 175 FGQLLDNGFVDTFRYLYPEQEDAYSWWSYRMNARSRNVGWRIDYFVVSSRLSDSIQEARI 234

Query: 242 DTKPRGWTKPSDHTPVIVSLDIPE 265
             +  G    SDH PV + + I E
Sbjct: 235 HAEVLG----SDHCPVELEIAIEE 254


>gi|150388422|ref|YP_001318471.1| exodeoxyribonuclease III Xth [Alkaliphilus metalliredigens QYMF]
 gi|149948284|gb|ABR46812.1| exodeoxyribonuclease III Xth [Alkaliphilus metalliredigens QYMF]
          Length = 251

 Score =  191 bits (485), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 70/262 (26%), Positives = 120/262 (45%), Gaps = 13/262 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN IRA +      +  E + DI C+QE+K ++     + L+    +     +
Sbjct: 1   MKLVSWNVNGIRACVKKGFLDYFNEVDADIFCIQESKLQEGQIELD-LEGYEQYWNYAVK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G A+ +K +PI +   +  ++ + + R +   F        + N+Y P+       
Sbjct: 60  KGYSGTAVFTKEKPISVKYGVGEEEDEEEGRVLTLEFD----QFYLVNVYTPNSKRGLER 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
              D     +   R   + L+  +P+I  GD N+  +  D  NP   +  A FT E R+ 
Sbjct: 116 L--DGRMIWEDEFRAHLKELDAIKPVILCGDLNVAHEEIDLKNPKSNKKSAGFTNEEREK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             +L   GF D+ R  +      YS+W Y   +  +N G RID+ ++S    + L  A I
Sbjct: 174 MTELLTSGFIDSFRYFYPDLEGAYSWWSYMGKARERNAGWRIDYFVVSERLKNQLKEAAI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
             +  G    SDH PV++ LDI
Sbjct: 234 HPQIMG----SDHCPVVLELDI 251


>gi|113953146|ref|YP_731259.1| exodeoxyribonuclease III [Synechococcus sp. CC9311]
 gi|113880497|gb|ABI45455.1| exodeoxyribonuclease III [Synechococcus sp. CC9311]
          Length = 274

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 82/264 (31%), Positives = 132/264 (50%), Gaps = 4/264 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A+WNVNS+R R+ ++  W++ +  D++ LQETK +D  FP E      Y I   GQK
Sbjct: 1   MQIASWNVNSVRTRLDHVLNWLEHSEADLLALQETKVDDPQFPLEPFLQRGYQIHIHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLP----GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
           +YNGVA++S+    ++          D    +    +   +     +R+ NLY+P+G+ +
Sbjct: 61  AYNGVALISRTPLEDVRMGFSAELLDDAEAKELGAQKRVISALIDGVRVVNLYVPNGSSL 120

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
           +S KY  K+SW+    R+       +EPL   GD+NI  +  D  +P         +   
Sbjct: 121 SSDKYSYKLSWLSCLERYLRAIQTRDEPLCVMGDFNIGLEARDLPDPDRLTGGIMASDRE 180

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R + +        DA R        +S+WDY + +W + +G RIDHI L     ++  S 
Sbjct: 181 RNALKAALGPDLQDAFRLFEPNSGHWSWWDYRSGAWDRGRGWRIDHIYLDETLRAVARSC 240

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
            ID + RG  +PSDH PV+V L  
Sbjct: 241 SIDKQERGRIQPSDHAPVVVDLAW 264


>gi|285016920|ref|YP_003374631.1| exodeoxyribonuclease III protein [Xanthomonas albilineans GPE PC73]
 gi|283472138|emb|CBA14645.1| probable exodeoxyribonuclease III protein [Xanthomonas albilineans]
          Length = 259

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 83/260 (31%), Positives = 135/260 (51%), Gaps = 6/260 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A+WNVNS+  R+ +L  W+    PD++ +QETK ED  FP   L    Y     GQK
Sbjct: 1   MKIASWNVNSLNVRLPHLQQWLDTFAPDVVGIQETKLEDHKFPDAALAEAGYRSVFAGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAILS+    ++   +PG + + +              LRI NLY+ +G  + S K
Sbjct: 61  TYNGVAILSRTPLSDVQIGVPGLEDEQKRAIAATVGD-----LRIVNLYVVNGQDVGSDK 115

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP-IIWENDACFTLEVRQS 182
           Y  K+ W++    + +  L+    L+  GD+NI P   D ++P +  ++    +   R +
Sbjct: 116 YAYKLRWLEAVHAWLAVELQRYPRLVVLGDFNIAPDSRDVHDPLVWNDDHILTSTAERNA 175

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
            +KL ++G  D  R  H    ++S+WDY    + ++ G+RID  ++S         A ID
Sbjct: 176 LRKLFDLGLHDGFRLHHADGGIFSWWDYRQAGFRRDLGLRIDLTLVSETLKEHTRGAGID 235

Query: 243 TKPRGWTKPSDHTPVIVSLD 262
             PR W +PSDH P  ++L+
Sbjct: 236 RTPRTWERPSDHAPAWIALE 255


>gi|11498188|ref|NP_069414.1| exodeoxyribonuclease III (xthA) [Archaeoglobus fulgidus DSM 4304]
 gi|2650040|gb|AAB90657.1| exodeoxyribonuclease III (xthA) [Archaeoglobus fulgidus DSM 4304]
          Length = 257

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 86/262 (32%), Positives = 140/262 (53%), Gaps = 6/262 (2%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           ++ +AT+NVNSIR+R+H +  W+KEN PDI+C+QETK E++ FP      + YH+   G 
Sbjct: 1   MLKIATFNVNSIRSRLHIVIPWLKENKPDILCMQETKVENRKFPEADFHRIGYHVVFSGS 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K  NGVAI S  +P ++   L  +  D                + + N Y+P G  I S 
Sbjct: 61  KGRNGVAIASLEEPEDVSFGLDSEPKDEDRLIRA-----KIAGIDVINTYVPQGFKIDSE 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           KY  K+ W++R   +  + ++     ++ GD N+ P+P D ++P   +N  CF  + R++
Sbjct: 116 KYQYKLQWLERLYHYLQKTVDFRSFAVWCGDMNVAPEPIDVHSPDKLKNHVCFHEDARRA 175

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYY-ADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           ++K+  +GF D +R  H    +Y+F+DY    +  +  G R+D I+ +P           
Sbjct: 176 YKKILELGFVDVLRKIHPNERIYTFYDYRVKGAIERGLGWRVDAILATPPLAERCVDCYA 235

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
           D KPR   KPSDH P++   D+
Sbjct: 236 DIKPRLAEKPSDHLPLVAVFDV 257


>gi|148379451|ref|YP_001253992.1| exodeoxyribonuclease III [Clostridium botulinum A str. ATCC 3502]
 gi|153934303|ref|YP_001383830.1| exodeoxyribonuclease III [Clostridium botulinum A str. ATCC 19397]
 gi|153935156|ref|YP_001387380.1| exodeoxyribonuclease III [Clostridium botulinum A str. Hall]
 gi|148288935|emb|CAL83022.1| putative exodeoxyribonuclease [Clostridium botulinum A str. ATCC
           3502]
 gi|152930347|gb|ABS35847.1| exodeoxyribonuclease III [Clostridium botulinum A str. ATCC 19397]
 gi|152931070|gb|ABS36569.1| exodeoxyribonuclease III [Clostridium botulinum A str. Hall]
          Length = 253

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 68/262 (25%), Positives = 115/262 (43%), Gaps = 12/262 (4%)

Query: 4   VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + +WNVN +RA    N   WI E +PDI+C+QETK ++            Y+      
Sbjct: 1   MRIYSWNVNGLRAVAKKNFIEWIGEESPDILCIQETKLQENQLEDNIKNIDGYYSYFSFA 60

Query: 62  -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GVA  +K +PI +   +  +  D + R +        +   + N+Y P+G    
Sbjct: 61  VKKGYSGVATYTKVKPISVKHSIGIEKFDSEGRILI----TGFKDFTLLNIYFPNGQ-RD 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   K+ + +    +  + ++  + L+  GDYN      D  NP   E  + F    R
Sbjct: 116 EERLQYKLDFYEALFNYCDELVKEGKKLVICGDYNTAHNEIDLKNPKANEKTSGFLRIER 175

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
               K+   G+TD  R  +     YS+W Y   +  +N G RID+  +S      + +  
Sbjct: 176 DWLDKIIERGYTDTFRNMNPDKIKYSWWSYRFKARERNAGWRIDYHFVSNNLLDRVENTE 235

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I  +  G    SDH PV++ L 
Sbjct: 236 ILNEVYG----SDHCPVMLELK 253


>gi|163782364|ref|ZP_02177362.1| exodeoxyribonuclease III [Hydrogenivirga sp. 128-5-R1-1]
 gi|159882397|gb|EDP75903.1| exodeoxyribonuclease III [Hydrogenivirga sp. 128-5-R1-1]
          Length = 258

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 88/262 (33%), Positives = 140/262 (53%), Gaps = 6/262 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+NVNSI+AR   L +W++    D++CLQE K E+KNFP+   +   Y  E   QK
Sbjct: 1   MKIATYNVNSIKARKELLFSWLEREPVDVLCLQELKQEEKNFPYGEFEERGYRCEVFAQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGV I SK    ++      +  D Q R I A        +R+ N+Y PHG+   + K
Sbjct: 61  TYNGVCICSKLPMEDVRKGFGDEYFDQQKRVISAKVG----EIRVINVYAPHGDLRGTEK 116

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ +  R LR+ S     EEP+   GD+N+  +  D ++P + ++      E R++F
Sbjct: 117 FYYKLEFYDRLLRYLSDNFSPEEPICMVGDFNVAREDIDVFDPELLKDTIGTMKEEREAF 176

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           +++   GF DA R  +     +++WDY      K+KG+RID+I+++      L    +D 
Sbjct: 177 ERVLKWGFIDAFRYLYPDRVQFTWWDYIGGMIWKDKGMRIDYILITEPLLGKLKEVYVDL 236

Query: 244 KPRGW--TKPSDHTPVIVSLDI 263
            PR     KPSDH PVI   ++
Sbjct: 237 WPRKRRTPKPSDHAPVIGVFEL 258


>gi|302039598|ref|YP_003799920.1| exodeoxyribonuclease III [Candidatus Nitrospira defluvii]
 gi|300607662|emb|CBK43995.1| Exodeoxyribonuclease III [Candidatus Nitrospira defluvii]
          Length = 257

 Score =  191 bits (485), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 89/259 (34%), Positives = 133/259 (51%), Gaps = 5/259 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+NVNS+R R+  +  W++ + PD++CLQETK +D  FP   L +  Y I   G K
Sbjct: 1   MKIATFNVNSLRKRLPIVLQWLERHQPDVLCLQETKVQDSEFPLTALATSGYEITFRGMK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAILS+ +P  I           +AR +     +  Q + I N Y+P G  I S K
Sbjct: 61  AYNGVAILSRTKPEAISYGFDDGGEREEARLLR----VVIQGIPIINTYVPQGFEIDSPK 116

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W  R  +     L  +EP I+ GD N+ P+P D ++P       C+  + R ++
Sbjct: 117 YQYKLGWYDRLRKHFETHLSPKEPAIWCGDMNVAPRPIDVHSPEKHLKHVCYHEDARNAY 176

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYAD-SWSKNKGIRIDHIMLSPEATSLLHSARID 242
            K    GF D     +     ++F+DY A  + + NKG RIDHI+ +P          +D
Sbjct: 177 GKTVAWGFEDVFCRLYPDRQQFTFFDYRAPSALAANKGWRIDHILATPPLAQRCRRVDVD 236

Query: 243 TKPRGWTKPSDHTPVIVSL 261
            +PR  T PSDHT +    
Sbjct: 237 LEPRRATDPSDHTVLWAEF 255


>gi|88801994|ref|ZP_01117522.1| exodeoxyribonuclease III [Polaribacter irgensii 23-P]
 gi|88782652|gb|EAR13829.1| exodeoxyribonuclease III [Polaribacter irgensii 23-P]
          Length = 253

 Score =  191 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 68/264 (25%), Positives = 125/264 (47%), Gaps = 15/264 (5%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY---HIET 59
           + + ++NVN IRA +      W++  NPD++C+QETK           ++  Y   +  +
Sbjct: 1   MKIISYNVNGIRAALKKGFLDWLQVANPDVLCIQETKAHKDQLDLSEFENAGYPYHYWFS 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y  VA+L K +P  +      + +D + R +   F      + + ++YLP G  +
Sbjct: 61  AQKKGYASVAVLCKEKPNHVEYGTGIETMDFEGRNLRVDFDA----VSVMSMYLPSGTNL 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                + K++++     + +   +    L+  GDYNI  +  D +NP   +  + F  E 
Sbjct: 117 DR--LNFKLNYMDEIQEYINNLKKEIPNLVVCGDYNICHEEMDIHNPK-MKGVSGFLPEE 173

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R         GF D+ R  +     YS+W Y A++ + NKG R+D+ M+S    + +  A
Sbjct: 174 RTWMSDFIKSGFVDSFRYLNQDVQAYSWWSYRANARANNKGWRLDYAMVSSALKAHISRA 233

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
            I ++     K SDH P++V L++
Sbjct: 234 YILSEA----KHSDHCPIVVELNL 253


>gi|307266821|ref|ZP_07548344.1| exodeoxyribonuclease III Xth [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306918162|gb|EFN48413.1| exodeoxyribonuclease III Xth [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 257

 Score =  191 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 70/263 (26%), Positives = 114/263 (43%), Gaps = 14/263 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + +WNVN +RA +      + K+ N DI C+QETK +      E L    Y+      
Sbjct: 1   MKLVSWNVNGLRACLQKGFMDYFKKVNADIFCIQETKLQPHQTDLEELNLEGYYAFWNFA 60

Query: 62  -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K+Y+G A+ +KY+P+ +   +     D + R I   +       +   +     N   
Sbjct: 61  EKKAYSGTAVFTKYKPLSVNYGIGIPQHDNEGRVITLEYE------KFYLVNTYTPNSQR 114

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
                      +   R    +L+  +P+I  GD N+  +  D  NP     +A FT E R
Sbjct: 115 GLTRLSYRMEWEEDFRNYLLKLDSVKPIILCGDLNVAHKEIDIKNPSANRRNAGFTDEER 174

Query: 181 QSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           +    L N GF D  R  +      Y++W Y  ++  KN G RID+ ++S      L  A
Sbjct: 175 EKMTMLLNSGFIDTFRYFYPHKKDAYTWWSYMRNAREKNIGWRIDYFIVSQRLKDYLIDA 234

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
            I +   G    SDH PV++ +D
Sbjct: 235 EIHSDVMG----SDHCPVVLEID 253


>gi|168182409|ref|ZP_02617073.1| exodeoxyribonuclease III [Clostridium botulinum Bf]
 gi|182674470|gb|EDT86431.1| exodeoxyribonuclease III [Clostridium botulinum Bf]
          Length = 253

 Score =  191 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 68/262 (25%), Positives = 115/262 (43%), Gaps = 12/262 (4%)

Query: 4   VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + +WNVN +RA    N   WI E +PDI+C+QETK ++            Y+      
Sbjct: 1   MRIYSWNVNGLRAVAKKNFIEWIGEESPDILCIQETKLQENQLEDNIKNIDGYYSYFSFA 60

Query: 62  -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GVA  +K +PI +   +  +  D + R +   F        + N+Y P+G    
Sbjct: 61  AKKGYSGVATYTKVKPISVKHSIGIEKFDSEGRILITEFK----DFTLLNIYFPNGQ-RD 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   K+ + +    +  + ++  + L+  GDYN      D  NP   E  + F    R
Sbjct: 116 EERLQYKLDFYEALFNYCDELVKEGKKLVICGDYNTAHNEIDLKNPKANEKTSGFLRIER 175

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
               K+   G+TD  R  +     YS+W Y   +  +N G RID+  +S      + +  
Sbjct: 176 DWLDKIIERGYTDTFRNMNPDKIKYSWWSYRFKARERNAGWRIDYHFVSNNLLDRVENTE 235

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I  +  G    SDH P+++ L 
Sbjct: 236 ILNEVYG----SDHCPIMLELK 253


>gi|319787682|ref|YP_004147157.1| exodeoxyribonuclease III Xth [Pseudoxanthomonas suwonensis 11-1]
 gi|317466194|gb|ADV27926.1| exodeoxyribonuclease III Xth [Pseudoxanthomonas suwonensis 11-1]
          Length = 267

 Score =  191 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 99/264 (37%), Positives = 152/264 (57%), Gaps = 5/264 (1%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
            V+ +AT+NVN I  R+ +L  W++   PD++ LQE K  D+ FP   +++  Y     G
Sbjct: 7   RVLKLATFNVNGIGPRLPHLLLWLEREQPDVVALQELKARDEAFPAAEIEAAGYGAIWHG 66

Query: 62  QKSYNGVAIL-SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           +  +NGVA+L     PIE    LPGD  D Q+R+IEA        + +G LYLP+GNP  
Sbjct: 67  EHRWNGVALLGRGVTPIESRRGLPGDRSDSQSRYIEAAV----HGVVVGALYLPNGNPQP 122

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             K+D K+ W+ R  R  +  ++L  P +  GD+N+IP   D Y+P  W+ DA    EVR
Sbjct: 123 GPKFDYKLKWMARLARHVATLVDLPHPAVLMGDFNVIPTDEDVYDPKSWKRDALIQPEVR 182

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           +++ KL   G+TDA+R  +    +Y+FWDY+   + +++G+RIDH++L+P     L  A 
Sbjct: 183 EAYAKLLAQGWTDALREVYGEERVYTFWDYFRQHFERDRGLRIDHLLLNPALAPGLEEAG 242

Query: 241 IDTKPRGWTKPSDHTPVIVSLDIP 264
           +D   R   KPSDH P  + + +P
Sbjct: 243 VDRWVRALEKPSDHAPTWIRVKLP 266


>gi|282865502|ref|ZP_06274553.1| exodeoxyribonuclease III Xth [Streptomyces sp. ACTE]
 gi|282559546|gb|EFB65097.1| exodeoxyribonuclease III Xth [Streptomyces sp. ACTE]
          Length = 271

 Score =  191 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 58/271 (21%), Positives = 113/271 (41%), Gaps = 12/271 (4%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++TV + NVN +RA        W+ ++  D++CLQE + E +  P E  +   +H     
Sbjct: 1   MLTVTSVNVNGLRAAAKKGFVEWLAQSEADVVCLQEVRAEPQQLPEEVREPEGWHTVHAP 60

Query: 62  Q--KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIE--ATFTINTQTLRIGNLYLPHGN 117
              K   GV++ ++  P  +     G D+     F        ++   + + +LYLP G+
Sbjct: 61  AAAKGRAGVSLYTRQAPERVQIGFGGFDVPGSEEFDTGGRYVEVDLPGVTVASLYLPSGD 120

Query: 118 PITSTKYDDKISWIKRFLRFASQRLEL----EEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
            + + + D+K  ++  FL +              ++  GD+NI  +  D  N    + ++
Sbjct: 121 -VGTERQDEKERFMAAFLPYLEGLKVRAAAAGREVLVCGDWNIAHREADLKNWKANKKNS 179

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRA--THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
            F  E R    ++        +      D    YS+W Y   ++  + G RID+ + +  
Sbjct: 180 GFLPEERAWLTRVFEEAAYVDVVRALHPDQEGPYSWWSYRGRAFDNDAGWRIDYQVATEG 239

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
             +    A ++       + SDH PV V+ +
Sbjct: 240 LAARAVKAWVERAATHGERWSDHAPVTVTYE 270


>gi|313897464|ref|ZP_07831007.1| exodeoxyribonuclease III [Clostridium sp. HGF2]
 gi|312957834|gb|EFR39459.1| exodeoxyribonuclease III [Clostridium sp. HGF2]
          Length = 254

 Score =  191 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 69/261 (26%), Positives = 110/261 (42%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN IRA +      + KE + D+ C+QETK +      ET     Y + +  +
Sbjct: 1   MRLVSWNVNGIRACMQKGFMDFFKEIDADVFCIQETKMQPGQLEIETPGYYQY-MNSAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G  + SK +P+ +   L  ++ D + R I   +                   +   
Sbjct: 60  KGYSGTMVFSKQKPLSVTYGLGIEEHDHEGRVITCEYEDFYLVCVYTPNSKDGLLRLDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +   R    +L   + ++  GD N+  +  D  NP     +A FT E R  
Sbjct: 120 M------VWEDAFRAYLHKLNETKSVLVCGDLNVAHKEIDLKNPKTNRRNAGFTDEERGK 173

Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
              L   GF D+ R  +     +YS+W Y   +  KN G RID+ ++S +A   +  ARI
Sbjct: 174 MSVLLESGFIDSFRYLYPKQEGIYSWWSYRFKAREKNAGWRIDYFLVSEDAKEAIREARI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            T   G    SDH PV +  D
Sbjct: 234 HTDIYG----SDHCPVSLEFD 250


>gi|148284985|ref|YP_001249075.1| exodeoxyribonuclease III [Orientia tsutsugamushi str. Boryong]
 gi|146740424|emb|CAM80902.1| exodeoxyribonuclease III [Orientia tsutsugamushi str. Boryong]
          Length = 273

 Score =  191 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 101/264 (38%), Positives = 148/264 (56%), Gaps = 2/264 (0%)

Query: 1   MS-VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETL-QSLNYHIE 58
           MS  + + TWN+NSIRAR + L   I +  PDII LQE K E  NFPF+ + +S  Y+  
Sbjct: 10  MSRKLKILTWNINSIRARAYQLNQLIYDIQPDIILLQEIKCESHNFPFQEINESHKYNFS 69

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
             GQKSYNGVAILSK+   +I     G+    QARFIEA        +++ ++Y+P+G  
Sbjct: 70  INGQKSYNGVAILSKFPLEDIKFTFLGNPCPDQARFIEANCLTEVGYVKVISIYVPNGGE 129

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
           + S K+  K+ +I +F+++      L E +I  GD+N+ P  +D Y+ I  +N  CFTL 
Sbjct: 130 VNSDKFQIKLLFIDKFIKYLHSSKNLGESIILGGDFNVAPYDNDVYSAIELQNTTCFTLP 189

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
            +Q  +KL N  F D  R  H     +++WDY A ++ +N G+RID+I+ +         
Sbjct: 190 EKQYIRKLINHNFIDIYRLFHQRQKKFTWWDYRAGAFERNLGMRIDYILCTISIALKATD 249

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
             ID   R   + SDH PVI S +
Sbjct: 250 CYIDYHTRNNHRASDHAPVIASFE 273


>gi|157826086|ref|YP_001493806.1| exodeoxyribonuclease III [Rickettsia akari str. Hartford]
 gi|157800044|gb|ABV75298.1| Exodeoxyribonuclease III [Rickettsia akari str. Hartford]
          Length = 260

 Score =  191 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 97/260 (37%), Positives = 146/260 (56%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+NSI+ R++ L  ++ + NPDI+ LQE K + +NFPF+ L  L Y+    GQ+
Sbjct: 1   MKIATWNINSIKTRLNLLRNFLSQENPDILLLQEIKCKTENFPFDELSDLPYNFYVHGQQ 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           SYNGVAI+SK+   EI+   P +    QARF+E   ++      I +LY P+G+ + S K
Sbjct: 61  SYNGVAIISKFPADEIIKDFPNNYCSDQARFLEIKLSLPIGFCNIISLYAPNGSFVGSDK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+++   F+ + S +   +E  I  GD NI P   D Y+P I     CFT   ++  
Sbjct: 121 FVAKLAFYDNFINYLSTKKSFDEKTIIGGDLNIAPFDIDVYSPKILSETTCFTEVEQKKL 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + + N GF D  R  H +   +S+WDY A  + +NKG+RID I+        L +  +D 
Sbjct: 181 RTILNAGFEDLYRLMHPSKQAFSWWDYRAGCFEQNKGMRIDMILGCNNTIDYLENCYMDY 240

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
             R   KPSDH PVI S  +
Sbjct: 241 NLRTQEKPSDHIPVIASFKV 260


>gi|227496831|ref|ZP_03927099.1| exonuclease III [Actinomyces urogenitalis DSM 15434]
 gi|226833664|gb|EEH66047.1| exonuclease III [Actinomyces urogenitalis DSM 15434]
          Length = 283

 Score =  191 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 74/286 (25%), Positives = 126/286 (44%), Gaps = 30/286 (10%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSIR R+  + A++   N D++ +QE K + + FP E  ++  Y +   G  
Sbjct: 1   MRLATWNVNSIRTRVDRVMAFLDRENIDVLAMQEIKCKPEQFPREPFEAAGYELAVHGLN 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDV-------------------------QARFIEAT 98
            +NGVAI S+    ++ T  PG                                      
Sbjct: 61  QWNGVAIASRVGLTDVETSFPGQPTWESASLGGAVVEARALGVTVGGQPAGSTPPPAPDA 120

Query: 99  FTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRL--ELEEPLIFAGDYNI 156
                  +R+ +LY+P+G  +T   Y  K+ W++      +  L  +   PL   GD+N+
Sbjct: 121 AAPACAPVRLWSLYVPNGRELTHPHYTYKLDWLRTLREDVAAWLSEDPGLPLALVGDWNV 180

Query: 157 IPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS 216
            P+  D ++ + +E     +   R +F   + +G  +  R+       Y++WDY    + 
Sbjct: 181 APRDEDVWDMVAFEGATHVSSPERAAFVAFEQVGMEEVTRS---RVTNYTYWDYQKLRFP 237

Query: 217 KNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
           +N+G+RID +  S    + +  A ID   R     SDH PVIV +D
Sbjct: 238 RNEGMRIDFVYASAALAARVRDAAIDRDERKGKGASDHVPVIVEID 283


>gi|260904213|ref|ZP_05912535.1| exodeoxyribonuclease III [Brevibacterium linens BL2]
          Length = 256

 Score =  191 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 73/255 (28%), Positives = 119/255 (46%), Gaps = 3/255 (1%)

Query: 12  NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAIL 71
           NSIRAR   + AW+  ++ D++ +QE K +D+ FP +   S  Y +   G   +NGVAI 
Sbjct: 2   NSIRARHDRIGAWLDRSDVDVLAIQELKCKDEQFPEDLFTSRGYEVSFHGLNQWNGVAIA 61

Query: 72  SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT-LRIGNLYLPHGNPITSTKYDDKISW 130
           S+    +            +   +EA     T   +R+ +LY+P+G  +    Y  K+ W
Sbjct: 62  SRVGLEDPEIGFTDIPSFGEEPVVEARALSATCGGVRVYSLYVPNGRELDHPHYTYKLEW 121

Query: 131 IKRFLRFASQRL--ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN 188
            +      S +L    ++ L+  GD+N+ P   D ++   ++     +   R +F  L  
Sbjct: 122 YRALTADISAQLSETPDKKLVLCGDFNVAPLDEDVWDMAEFDGLTHVSEPERDAFNSLLG 181

Query: 189 MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGW 248
            G T+  R       +Y+FWDY   ++ K KG+RID  + SP        A ID + R  
Sbjct: 182 AGLTEVTRQFTPGPGVYTFWDYQRLAFPKKKGMRIDFELASPSLAEKATGAEIDREERKG 241

Query: 249 TKPSDHTPVIVSLDI 263
              SDH PVIV  ++
Sbjct: 242 KGASDHAPVIVDYEV 256


>gi|329946194|ref|ZP_08293807.1| putative exodeoxyribonuclease III [Actinomyces sp. oral taxon 170
           str. F0386]
 gi|328527792|gb|EGF54783.1| putative exodeoxyribonuclease III [Actinomyces sp. oral taxon 170
           str. F0386]
          Length = 269

 Score =  191 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 74/272 (27%), Positives = 123/272 (45%), Gaps = 16/272 (5%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSIR R+  + A+++  + D + +QE K     FP E  ++  Y +   G  
Sbjct: 1   MRLATWNVNSIRTRVDRVLAFLEREDVDALAMQEIKCRPDQFPVEPFEAAGYRLAIHGLN 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-----------TQTLRIGNLY 112
            +NGVAI S+    ++ T  PG          E                  + +R+ +LY
Sbjct: 61  QWNGVAIASRVGLDDVATSFPGQPGWAAKSEAEPVVEARALGATVGAASEARPVRLWSLY 120

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWE 170
           +P+G  +T   Y  K+ W++      +  L  E  L     GD+N+ P+  D ++  ++E
Sbjct: 121 VPNGRELTHPHYTYKLDWLRALRDDVATWLRAEPDLPLALVGDWNVAPKDEDVWDMSVFE 180

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230
                +   R++F      G  +  R   +    Y++WDY    + +N+G+RID +  S 
Sbjct: 181 GATHVSAPEREAFAAFAETGMHEVTR---ERVTNYTYWDYQKLRFPRNEGMRIDFVYASQ 237

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
                +  A ID   R     SDH PVIV +D
Sbjct: 238 ALADRVTGAAIDRNERKGKGASDHVPVIVEVD 269


>gi|152996388|ref|YP_001341223.1| exodeoxyribonuclease III [Marinomonas sp. MWYL1]
 gi|150837312|gb|ABR71288.1| exodeoxyribonuclease III [Marinomonas sp. MWYL1]
          Length = 289

 Score =  191 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 86/271 (31%), Positives = 123/271 (45%), Gaps = 9/271 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H + A +++  PD+I LQE K  D  FP E  +S+ YH    GQK
Sbjct: 19  MKFVSFNINGLRARPHQIEALVEKLAPDVIGLQEIKVHDDAFPHEIPESIGYHAYYYGQK 78

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           S+ GVAI SK +  +I    PGD+ D Q R I ATF      +++ N Y P G       
Sbjct: 79  SHYGVAIFSKQEATKIEYGFPGDEEDAQRRMIIATFDTPQGPVKVLNGYFPQGESRDHEI 138

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFTL 177
                      L         +E +I  GD NI P               +      F  
Sbjct: 139 KFPAKRKFYADLMEYLAAHSPDEKIIVMGDINISPTDLDIGIGEPNAKRWLKTGKCSFLP 198

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSK--NKGIRIDHIMLSPEATS 234
           E R+ F  L N G TD  R  + T    +S++DY +  +     +G+RID IM S     
Sbjct: 199 EEREWFATLANWGLTDTYRQLNPTKNDRFSWFDYRSKGFEDTPKRGLRIDVIMASNGLMP 258

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
            L ++ +D   R   KPSDH P+  S ++ E
Sbjct: 259 YLENSDVDYDLRALEKPSDHAPIWTSFNLSE 289


>gi|192361651|ref|YP_001982212.1| exonuclease III [Cellvibrio japonicus Ueda107]
 gi|190687816|gb|ACE85494.1| exodeoxyribonuclease III [Cellvibrio japonicus Ueda107]
          Length = 269

 Score =  191 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 88/268 (32%), Positives = 129/268 (48%), Gaps = 10/268 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++NVNSIR R+H L A +  +NPD I LQETK  D +FP E +QSL YHIE  GQK
Sbjct: 1   MKAISFNVNSIRTRMHQLEAVVNNHNPDFIGLQETKVNDPDFPLEAIQSLGYHIEFFGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           ++ GVAILS++   +++     D  D Q RFI   F      + + N Y P G       
Sbjct: 61  THYGVAILSRHPFKKVIKGFRTDSDDAQRRFIGGVFDTPIGEVTLLNGYFPQGESRDHPI 120

Query: 124 -YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACFT 176
            +  K  +    L++ ++  + ++ LI  GD NI  Q  D           +      F 
Sbjct: 121 KFPGKAKFYADLLQYLTEEYQPQQQLIVMGDMNISHQDIDIGIGEENRKRWLRTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKN--KGIRIDHIMLSPEAT 233
            E R+   KL   G  D  R  +   +  +S++DY +  +  N  +G+RID I+ +    
Sbjct: 181 PEEREWLDKLLAWGLQDTYRELNPDSNEKFSWFDYRSGGFEDNPKRGLRIDLILATNPLI 240

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           +      ID   RG  KPSDH P+  S 
Sbjct: 241 NKCIDTGIDYDIRGMEKPSDHCPIWASF 268


>gi|88608769|ref|YP_506301.1| exodeoxyribonuclease III [Neorickettsia sennetsu str. Miyayama]
 gi|88600938|gb|ABD46406.1| exodeoxyribonuclease III [Neorickettsia sennetsu str. Miyayama]
          Length = 265

 Score =  191 bits (484), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 83/262 (31%), Positives = 138/262 (52%), Gaps = 4/262 (1%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
            ++ VATWNVNSIR R   ++A +   N D++ LQE K ++ +FP      L+Y++    
Sbjct: 5   RILKVATWNVNSIRQRAEAVSALLVSENLDVLLLQELKCQESDFPLHVFNDLSYNVILKC 64

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           QK YNGVAI S++   +I        +D +AR+IE   +   + +R+ ++Y+P+     S
Sbjct: 65  QKGYNGVAIASRWPITKIS---DEIYMDGEARYIEGVISFFDKCIRLISIYIPNAQAAGS 121

Query: 122 TKYDDKISWIKR-FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
            +++ K+ +      R     L   + ++  GD N  P+  D Y+P+  +    F +E R
Sbjct: 122 PRFEYKMQFHDALARRIHGYLLNNNDIMLLGGDMNAAPEDIDVYDPVKLDGCTGFHIEER 181

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
              ++L N+G  D  R  + T   +S+WDY      +N+G+RIDHI+ S E    L    
Sbjct: 182 SKLRELLNLGLFDTFRMKYPTKQEFSWWDYRGGGLQRNEGMRIDHILASAEGMDHLLDCY 241

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I  + R  ++PSDH PV+  L+
Sbjct: 242 ILKELRHISRPSDHVPVVCVLN 263


>gi|308175988|ref|YP_003915394.1| exodeoxyribonuclease III [Arthrobacter arilaitensis Re117]
 gi|307743451|emb|CBT74423.1| exodeoxyribonuclease III [Arthrobacter arilaitensis Re117]
          Length = 266

 Score =  190 bits (483), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 72/264 (27%), Positives = 119/264 (45%), Gaps = 6/264 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+RAR   +  W++  + D++ +QETK +D NFP+E  ++ +Y +   G  
Sbjct: 1   MKIATWNVNSLRARADRVEDWLRRTDVDVLAIQETKCKDDNFPWELFENNDYEVAHFGVN 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLD----VQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            +NGVAI S+     +    PG                        +RI +LY+P+G  +
Sbjct: 61  QWNGVAIASRVGLENVERTFPGQPEFGKGGKNPIQEPRAIAATCGGVRIWSLYVPNGRAL 120

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIF--AGDYNIIPQPHDCYNPIIWENDACFTL 177
                  K++W+    + ++  LE          GD+NI P+  D ++   +  +    +
Sbjct: 121 DDEHMGYKLNWLDVLKKESAGWLEENPQAQIALMGDWNIAPKNEDVWDIDFFVENNLTHV 180

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
              +                   T   Y++WDY    + K +G+RID  + SP  T+ + 
Sbjct: 181 SAPERAAFAAFEDLGFTDVVRPHTEGEYTYWDYTQLRFPKGEGMRIDFSLTSPALTARVI 240

Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261
            A ID + R     SDH PVIV L
Sbjct: 241 GASIDREERKGKGASDHAPVIVEL 264


>gi|227547870|ref|ZP_03977919.1| possible exodeoxyribonuclease III [Corynebacterium lipophiloflavum
           DSM 44291]
 gi|227080055|gb|EEI18018.1| possible exodeoxyribonuclease III [Corynebacterium lipophiloflavum
           DSM 44291]
          Length = 259

 Score =  190 bits (483), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 71/259 (27%), Positives = 121/259 (46%), Gaps = 10/259 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+NVNS+R+R   + A+++ N+ D++ +QETKT +  FP+   ++  Y +   G  
Sbjct: 1   MRIATFNVNSVRSRAERIVAFLERNDVDVLAMQETKTSEAKFPYAVFEAAGYEVAHVGTN 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVA+ S+    ++ T         +              + + +LY+P+G  I    
Sbjct: 61  QWNGVALASRVGLEDVRT-QFDHQPAYEGSVEARAVGATCGGVEVWSLYVPNGREIGHPH 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           YD K+ ++       + +     P +F GD+NI P+    ++   +E     T   R +F
Sbjct: 120 YDYKLQFLYSLQHEVAAQ----TPQLFTGDFNIAPRDSSVWDIAWFEGKTHVTEPERAAF 175

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + L   G  +           YSFWDY A  + KN+G+ ID ++ +P     L  A +D 
Sbjct: 176 EMLLEAGLVEIR-----HDDAYSFWDYKAMRFQKNQGMLIDFLLATPPLAGKLVKAWVDV 230

Query: 244 KPRGWTKPSDHTPVIVSLD 262
             R     SDH PVI   D
Sbjct: 231 DERRGKGASDHAPVIADFD 249


>gi|119775274|ref|YP_928014.1| exodeoxyribonuclease III [Shewanella amazonensis SB2B]
 gi|119767774|gb|ABM00345.1| Exodeoxyribonuclease III [Shewanella amazonensis SB2B]
          Length = 268

 Score =  190 bits (483), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 80/268 (29%), Positives = 125/268 (46%), Gaps = 9/268 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V ++N+N +R+R+H L A I    PDII LQETK  D+ FP   ++++ Y +   G K
Sbjct: 1   MKVVSFNINGLRSRLHQLQALIDTQAPDIIGLQETKVHDEAFPLADVEAMGYKVYFHGGK 60

Query: 64  SYNGVAILSKYQPIEIVTHL-PGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121
           ++ GVA+LSK +P  +        +   +   I      N + L + N Y P G      
Sbjct: 61  AHYGVALLSKVEPESVEKGYPWDAEDAQRRMIIGKFRQPNGRLLTVMNGYFPQGESRDHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175
            K+  K  +     R  ++    ++ +I  GD NI P         D     +      F
Sbjct: 121 IKFPAKRKFYADLQRLLTESYSCDDDIIIMGDINISPLDLDIGIGPDNAKRWLRTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHL-YSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R+  Q L++ GF D+ R  H      YS++DY +  +  N+G+RID IM +   T 
Sbjct: 181 LPEEREWLQTLKDWGFDDSFRVLHPEKDATYSWFDYRSKGFDDNRGLRIDVIMTTRSLTG 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
            L ++ +D   R   KPSDH PV    +
Sbjct: 241 RLVASGVDYNIRAMEKPSDHAPVWSEFE 268


>gi|7592805|dbj|BAA94392.1| orf0 [Actinobacillus actinomycetemcomitans]
          Length = 264

 Score =  190 bits (483), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 79/264 (29%), Positives = 120/264 (45%), Gaps = 8/264 (3%)

Query: 7   ATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYN 66
            ++N+N +RAR H L   I +  PD++ LQE K  D+ FP++ +  L YH+   GQK + 
Sbjct: 1   MSFNINGLRARPHQLEEIINKYQPDVLGLQEIKVSDEVFPYDLVDHLGYHVNHFGQKGHY 60

Query: 67  GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST-KYD 125
           GVA+LSK  P+ +    P DD + Q R I          L + N Y P G       K+ 
Sbjct: 61  GVALLSKQAPLSVRKGFPTDDEEAQKRIIMIDLETKFGQLTVINGYFPQGESREHPTKFP 120

Query: 126 DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFTLEV 179
            K  +     R+  Q    + P+I  GD NI P         +     +      F  E 
Sbjct: 121 AKQKFYADLQRYLEQDHNAQNPVIIMGDMNISPSDLDIGIGEENRKRWLRTGKCSFLPEE 180

Query: 180 RQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R+ +Q+L   G  D  R  + T +  +S++DY +  +  N+G+RIDHI+ +    +    
Sbjct: 181 REWYQRLYAYGLEDTFRHMNPTVNDKFSWFDYRSKGFDDNRGLRIDHILANKALVAHCVD 240

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
             I    R   KPSDH P+     
Sbjct: 241 TGIALDIRAMNKPSDHAPIWAEFK 264


>gi|300860584|ref|ZP_07106671.1| exodeoxyribonuclease III [Enterococcus faecalis TUSoD Ef11]
 gi|300849623|gb|EFK77373.1| exodeoxyribonuclease III [Enterococcus faecalis TUSoD Ef11]
          Length = 251

 Score =  190 bits (483), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 76/261 (29%), Positives = 115/261 (44%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +  N      E + D  CLQETK +      E L   + +     +
Sbjct: 1   MKCISWNVNGLRAVVKKNFLDVFNELDADFFCLQETKLQAGQIDLE-LPGYHQYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K + + +   L  +  D + R I   +                 +     
Sbjct: 60  KGYSGTAIFAKEEALSVRYGLGIEAHDQEGRVITLEYPEF-----FMVTCYTPNSQAELK 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +   +++W   F  +    L  E+P+I  GD N+  Q  D  N    + +A FT E RQ 
Sbjct: 115 RLAYRMTWEDAFRAY-LNELNQEKPVILCGDLNVAHQNIDLKNWKTNQKNAGFTPEERQK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L + GFTD  R  +     +YS+W Y  ++   N G RID+ ++S      L SA+I
Sbjct: 174 FTELLDSGFTDTFRYFYPEAEGIYSWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            T   G    SDH PV V LD
Sbjct: 234 HTDILG----SDHCPVEVVLD 250


>gi|323703101|ref|ZP_08114756.1| exodeoxyribonuclease III [Desulfotomaculum nigrificans DSM 574]
 gi|323531995|gb|EGB21879.1| exodeoxyribonuclease III [Desulfotomaculum nigrificans DSM 574]
          Length = 262

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 93/262 (35%), Positives = 134/262 (51%), Gaps = 5/262 (1%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64
            VA++N+NSIRAR   LA W+ EN PD+ICLQETK  DK+FP E  Q + Y+    GQKS
Sbjct: 4   KVASFNINSIRARQEMLANWLTENKPDVICLQETKVMDKDFPVEYFQEIGYNSLFKGQKS 63

Query: 65  YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124
           YNGVAILS +    I     GD  DV             + + + N Y+P G    S K+
Sbjct: 64  YNGVAILSPHPMTPI----AGDLGDVAEPGEARLIAAMVKDIPVVNTYVPQGQAPDSEKF 119

Query: 125 DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ 184
             K++W+K    + ++     +PL++ GD+N+ P+P D ++P        F  E  +   
Sbjct: 120 AYKLAWLKALRDYFARNFSAHQPLLWMGDFNVAPEPIDVHDPKRLLGHVGFHPEEHKVLN 179

Query: 185 KLQNMGFTDAIRATHDTHHLYSFWDYY-ADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            ++  GF D  R        ++FWDY      ++N G RIDHI  +        +A ID 
Sbjct: 180 YVKEWGFQDVFRKHQPEGGHFTFWDYRIRQGLARNLGWRIDHIWATAPLAEKSTNAWIDI 239

Query: 244 KPRGWTKPSDHTPVIVSLDIPE 265
           +PR   KPSDHT ++    +  
Sbjct: 240 EPRRLAKPSDHTFILAEFALSA 261


>gi|34581351|ref|ZP_00142831.1| exodeoxyribonuclease III [Rickettsia sibirica 246]
 gi|28262736|gb|EAA26240.1| exodeoxyribonuclease III [Rickettsia sibirica 246]
          Length = 260

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 97/259 (37%), Positives = 144/259 (55%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+NSI+ R++ L  ++ + NPDI+ LQE K E   FPF+ L  L Y+    GQK
Sbjct: 1   MKIATWNINSIKTRLNLLRNFLSKENPDILLLQEIKCETAKFPFDALSDLPYNSYVHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           SYNGVAI+SK+   EI+   P +    QARF+E   ++      I +LY P+G+ + S K
Sbjct: 61  SYNGVAIISKFPADEIIKDFPNNYCSDQARFLEIKLSLPIGFCNIISLYAPNGSFVGSDK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+++   F+ + S +   +E  I  GD+NI P   D Y+P +     CFT   ++  
Sbjct: 121 FVAKLAFYDNFINYLSTKKSFDEKTIIGGDFNIAPFDIDVYSPKLLAETTCFTEVEQKKL 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + + N GF D  R  H +   +S+WDY A  + +NKG+RID I+        L +  +D 
Sbjct: 181 RTILNSGFEDLYRLMHPSKQEFSWWDYRAGCFEQNKGMRIDMILGCNNTIDYLENCYMDY 240

Query: 244 KPRGWTKPSDHTPVIVSLD 262
             R   KPSDH PVI S  
Sbjct: 241 NLRAQEKPSDHIPVIASFK 259


>gi|289549078|ref|YP_003474066.1| exodeoxyribonuclease III Xth [Thermocrinis albus DSM 14484]
 gi|289182695|gb|ADC89939.1| exodeoxyribonuclease III Xth [Thermocrinis albus DSM 14484]
          Length = 261

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 84/265 (31%), Positives = 144/265 (54%), Gaps = 6/265 (2%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           M++  V T+NVNSIR+R   L  W++ +  D+ICLQETK E++ FPF   + + YH    
Sbjct: 1   MAMFRVCTYNVNSIRSRRELLFMWLERSQVDVICLQETKVEERAFPFPDFEKIGYHCYVK 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           GQ++YNGVAI SK    ++      D LD ++R I          + + N+Y PHG+   
Sbjct: 61  GQRTYNGVAICSKLPLQDVFKDTSMDILDKESRIIGGRLG----DIWLINVYFPHGDLRG 116

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
           + K+  K+++ ++F +F ++    E+ +I  GD N+  +  D Y+P++  +      E R
Sbjct: 117 TPKFTYKLAFYQQFYQFLAENFSPEDKIILLGDMNVALEDIDVYDPVLLRDTIGTMEEER 176

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            + +K+   GF D  R  +     +++WDY   +  K++G+RID+I+++      +    
Sbjct: 177 SALRKILEWGFVDTFRYLYPNKVQFTWWDYIGGAVWKDQGMRIDYILVTKPLLPSVRDVY 236

Query: 241 IDTKPRGW--TKPSDHTPVIVSLDI 263
           +D   R     KPSDH PV+  L++
Sbjct: 237 VDMWARKRRSPKPSDHAPVVCLLEL 261


>gi|253582729|ref|ZP_04859949.1| exodeoxyribonuclease III [Fusobacterium varium ATCC 27725]
 gi|251835305|gb|EES63846.1| exodeoxyribonuclease III [Fusobacterium varium ATCC 27725]
          Length = 253

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 68/261 (26%), Positives = 114/261 (43%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      + K  N DI C+QETK ++     + L+  + +     +
Sbjct: 1   MKLISWNVNGLRAAVQKGFLDYFKNENADIFCIQETKLQEGQIELD-LEGYHQYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +PIE+   L  ++ D + R I   +                   +   
Sbjct: 60  KGYSGTAIFTKKKPIEVSYGLGIEEHDKEGRVITLEYEDFYMITVYTPNSQEELARLDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +   R    +L+  +P+I  GD N+  +  D  NP     +A F+ E R  
Sbjct: 120 M------SWEDEFRNYVMKLDKLKPVIICGDLNVAHKEIDLKNPKSNRKNAGFSDEERAK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L   GF D+ R  +      YS+W Y  ++   N G RID+ ++S     ++  A I
Sbjct: 174 FTELLENGFIDSFRHFYPEVTGAYSWWSYRFNARKNNAGWRIDYFVVSERLKDIMEGAEI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
             +  G    SDH PV++ L 
Sbjct: 234 HNEILG----SDHCPVVLKLK 250


>gi|77465425|ref|YP_354928.1| exodeoxyribonuclease III [Rhodobacter sphaeroides 2.4.1]
 gi|77389843|gb|ABA81027.1| Exodeoxyribonuclease III [Rhodobacter sphaeroides 2.4.1]
          Length = 255

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 96/259 (37%), Positives = 147/259 (56%), Gaps = 4/259 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+NVN +  R+  L  W++E  PD++CLQE K     FP   L++  Y     GQK
Sbjct: 1   MRIATFNVNGVNGRLPVLLRWLEEARPDVVCLQELKAASARFPAAALEAAGYGAVWHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           S+NGVAIL++               D ++R+IEA        + +G LYLP+GNP    K
Sbjct: 61  SWNGVAILARGAEPVQTRQDLPGVQDGESRYIEAAVEG----VLVGCLYLPNGNPAPGPK 116

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K++W    L  A + L  + P++ AGD+N++P   D + P  W  DA    EVR +F
Sbjct: 117 FAAKLAWFDHLLNHAEEVLRHDVPVVLAGDFNVMPTDLDVHRPERWREDALCRPEVRAAF 176

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            +L   G+TD+IR  +    +Y+FWDY  ++W ++ G+R+DH++LSP   + L  A +D 
Sbjct: 177 ARLLAQGWTDSIRHLYPEDRIYTFWDYLRNAWERDAGLRLDHLLLSPSLLTRLKGAGVDR 236

Query: 244 KPRGWTKPSDHTPVIVSLD 262
             RGW K SDH PV +++D
Sbjct: 237 HVRGWEKASDHAPVWIAID 255


>gi|296138207|ref|YP_003645450.1| exodeoxyribonuclease III Xth [Tsukamurella paurometabola DSM 20162]
 gi|296026341|gb|ADG77111.1| exodeoxyribonuclease III Xth [Tsukamurella paurometabola DSM 20162]
          Length = 289

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 84/262 (32%), Positives = 125/262 (47%), Gaps = 7/262 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETC 60
           + VATWNVNS++ R   L  W+    PD++CLQE K  D  F       L    Y   T 
Sbjct: 1   MRVATWNVNSVKQRHGRLLEWLDSRQPDVVCLQELKLTDDAFATLIGPDLTERGYEFATA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           GQ  +NG A+LS+    ++V  +PG           A   +    +R+ +LY P+G  + 
Sbjct: 61  GQPQWNGSAVLSRVGLDDVVVGIPGAPAFDGTVEGRAISAVCAG-IRVHSLYTPNGREVG 119

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
           S  Y  K+ W+       S       P +  GD NI P   D ++P  +      T   R
Sbjct: 120 SDHYAYKLEWLAALRDQVSAD---SVPQLVCGDMNIAPTDEDVFDPAAFAGHTHVTEPER 176

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            + + L+++G  D +R    T  ++S+WDY A  ++KN G+RID I+ S        +A 
Sbjct: 177 DALRALEDLGLRDVVREHWPTDQVFSYWDYRAGMFNKNLGMRIDLILASGPVADRTAAAW 236

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           ID + R    PSDH PV++ LD
Sbjct: 237 IDRQARKGKGPSDHAPVMLDLD 258


>gi|171463432|ref|YP_001797545.1| exodeoxyribonuclease III Xth [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|171192970|gb|ACB43931.1| exodeoxyribonuclease III Xth [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 288

 Score =  190 bits (483), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 84/278 (30%), Positives = 134/278 (48%), Gaps = 17/278 (6%)

Query: 4   VTVATWNVNSIRARIHNLAAWI-----KENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           V +A WNVNS++ R+  +  W+     K    D +CLQE K  D  +P + L+   Y   
Sbjct: 5   VRIAAWNVNSLKVRLPQVLRWLQDQENKRQPIDALCLQELKLTDDKYPHKELEDAGYLSL 64

Query: 59  TCGQKSYNGVAIL------------SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
             GQK+YNGVAI+            +    ++ + ++P    + Q           T  +
Sbjct: 65  AAGQKTYNGVAIIVRKAALAPIASDTATSFLKPIRNIPNFKDEQQRILAATIPFAGTPAM 124

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
           R+ + Y P+G    S K+  K+ W+K    +  + LE    L   GD+NI P   D ++ 
Sbjct: 125 RLVSAYFPNGQSPDSDKFVYKLGWLKALHTWLGEELENNSRLALLGDFNIAPADEDVHDS 184

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226
            +WE  +  +   R++FQ L  +G  D+ R       ++S+WDY    + +N G+RIDHI
Sbjct: 185 KVWEGQSLVSPPEREAFQGLIKLGLNDSFRMFEQAPKVFSWWDYRMMGFRRNAGMRIDHI 244

Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
           +LS        ++ +D +PR W +PSDH PVI     P
Sbjct: 245 LLSEALKDQCIASTVDKEPRTWEQPSDHAPVIAEFKKP 282


>gi|154484298|ref|ZP_02026746.1| hypothetical protein EUBVEN_02011 [Eubacterium ventriosum ATCC
           27560]
 gi|149734775|gb|EDM50692.1| hypothetical protein EUBVEN_02011 [Eubacterium ventriosum ATCC
           27560]
          Length = 251

 Score =  190 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 69/262 (26%), Positives = 113/262 (43%), Gaps = 13/262 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN IRA +      +  E + DI C+QE+K ++     E      Y      +
Sbjct: 1   MKLISWNVNGIRACVTKGFMDFFNEIDADIFCIQESKMQEGQLELEMPGYYQY-WNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +P+++   +  ++ D + R I   F                   +   
Sbjct: 60  KGYSGTAIFTKKEPMDVKYGIGIEEHDHEGRVITLEFEDFYMVTCYTPNSQNELKRLDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +   +   ++LE  +P++  GD N+  +  D  NP     +A FT E R+ 
Sbjct: 120 MQ------WEDDFKAYLKKLEESKPVVLCGDLNVAHKEIDLKNPKTNRKNAGFTDEEREK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             KL + GF D  R  +      YS+W Y   +  KN G RID+ ++S      L  A I
Sbjct: 174 MTKLLDDGFIDTFRYFYPDLEGKYSWWSYRFKAREKNAGWRIDYFIVSEALKDKLEGADI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
            T+  G    SDH P+ + L+I
Sbjct: 234 HTEILG----SDHCPIELDLNI 251


>gi|315186595|gb|EFU20354.1| exodeoxyribonuclease III Xth [Spirochaeta thermophila DSM 6578]
          Length = 256

 Score =  190 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 60/262 (22%), Positives = 100/262 (38%), Gaps = 9/262 (3%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           +V+V +WNVN IRA     L  WI++  P+I+CLQETK      P E  +   YH     
Sbjct: 1   MVSVYSWNVNGIRAAAKKGLLDWIEKERPEILCLQETKARRDQLPSELARPDGYHTYWAE 60

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
                   +        +     G +   +    E    I      +        +    
Sbjct: 61  ADKPGYSGVALFTLYEPVSVEPLGVEAFDR----EGRTLIADFGSFVFFGCYFPNSQEAG 116

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            + D K+++       A   +     ++ +GD+NI   P D   P   E +  +  E R+
Sbjct: 117 ARLDYKLAYCNAVKERADAYVAAGRHVLISGDFNIAHTPLDLARPEANEKNPGYLPEERE 176

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
                 + G+ D  R        Y++W Y   +  K+ G RID+  ++      +  + I
Sbjct: 177 WMTYFLSSGYVDTFRMFTKEGGHYTWWTYRFKAREKDIGWRIDYHCVNEGFKDKVKESVI 236

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
                G    SDH PV ++LD+
Sbjct: 237 LKNVMG----SDHCPVKITLDV 254


>gi|329955159|ref|ZP_08296116.1| exodeoxyribonuclease III [Bacteroides clarus YIT 12056]
 gi|328526158|gb|EGF53177.1| exodeoxyribonuclease III [Bacteroides clarus YIT 12056]
          Length = 254

 Score =  190 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 79/261 (30%), Positives = 134/261 (51%), Gaps = 12/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60
           + + T+NVN +RA +      W+    PD++CLQETK + + +P E L +  Y  ++ + 
Sbjct: 1   MKIITYNVNGLRAAVTKGFPEWLANEQPDVLCLQETKLQPEQYPAEALDASGYKHYLYSA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GVAIL+K +P  +   +  ++ D + RFI A +      L I ++Y P G    
Sbjct: 61  RKKGYSGVAILTKREPDHVEYGMGIEEYDNEGRFIRADYG----DLSIVSVYHPSG-TSG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   K+ W+++F ++  +       LI  GDYNI  +  D ++P+    ++ F  E R
Sbjct: 116 DERQAFKMVWLEKFQQYVVELQRTRPKLILCGDYNICHEAIDIHDPVRNATNSGFLPEER 175

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           +   +  N GF D  R  H     Y++W Y  +S +KNKG RID+ M++     +L  AR
Sbjct: 176 EWMTRFLNAGFIDTFRLLHPDKQEYTWWSYRFNSRAKNKGWRIDYCMVNEPVRPMLKEAR 235

Query: 241 IDTKPRGWTKPSDHTPVIVSL 261
           I          SDH P+++ +
Sbjct: 236 ILNDA----VHSDHCPMMLEI 252


>gi|255655350|ref|ZP_05400759.1| putative exodeoxyribonuclease [Clostridium difficile QCD-23m63]
 gi|296451338|ref|ZP_06893076.1| exodeoxyribonuclease III [Clostridium difficile NAP08]
 gi|296259754|gb|EFH06611.1| exodeoxyribonuclease III [Clostridium difficile NAP08]
          Length = 250

 Score =  190 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 72/261 (27%), Positives = 117/261 (44%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN IRA        + KE + D+ CLQETK ++     + L     +     +
Sbjct: 1   MRFISWNVNGIRACAGKGFLDFFKEVDADVFCLQETKLQEGQIELD-LPGYFQYWNYAER 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +P++++  +  ++ D + R I   F           +Y P+       
Sbjct: 60  KGYSGTAIFTKKEPLKVMYGINIEEHDKEGRVITLEFE----DFYFVTVYTPNSQSELKR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
              +  +  +        +L+  +P+I  GD N+  +  D  NP     +A FT E R+ 
Sbjct: 116 L--EYRTRWEDDFIDYLTKLDNHKPVIVCGDMNVAHKEIDLKNPKNNMKNAGFTKEEREK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F KL + GF D  R  +     +YS+W Y  ++   N G RID+   S +    L SA I
Sbjct: 174 FSKLLDSGFIDTYRYFNPDKEGVYSWWSYRFNARKNNAGWRIDYFCASKKLEDRLISADI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            T+  G    SDH PV + + 
Sbjct: 234 HTEVLG----SDHCPVELEIK 250


>gi|304385589|ref|ZP_07367933.1| exodeoxyribonuclease III [Pediococcus acidilactici DSM 20284]
 gi|304328093|gb|EFL95315.1| exodeoxyribonuclease III [Pediococcus acidilactici DSM 20284]
          Length = 251

 Score =  190 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 71/262 (27%), Positives = 120/262 (45%), Gaps = 13/262 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +         E + DI C+QETK ++     + L   + +     +
Sbjct: 1   MKLISWNVNGLRAAVKHGFLDVFNELDADIFCVQETKLQEGQIDLD-LPGYHQYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G A+ +K +P+ +   L   + D + R I   +                 +     
Sbjct: 60  KGYSGTAVFTKREPVAVSYGLGIPEFDQEGRVITLEYEKF-----FLVTCYTPNSQPELR 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           + D +++W   F  +  Q L   +P+IF GD N+  +  D  N     ++A FT E RQ 
Sbjct: 115 RLDYRMNWDDAFRAYVKQ-LADTKPVIFCGDLNVAHEEIDLKNDRTNHHNAGFTDEERQK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L   GFTD  R  +     +YS+W Y  ++ + N G RID+ + S      L  A+I
Sbjct: 174 FTELLQSGFTDTYRYFYPDKEGVYSWWSYRFNARANNAGWRIDYFVTSQALDKQLADAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
            T+  G    SDH P+ + L++
Sbjct: 234 HTEIFG----SDHCPIELDLNL 251


>gi|262198814|ref|YP_003270023.1| exodeoxyribonuclease III Xth [Haliangium ochraceum DSM 14365]
 gi|262082161|gb|ACY18130.1| exodeoxyribonuclease III Xth [Haliangium ochraceum DSM 14365]
          Length = 260

 Score =  190 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 77/264 (29%), Positives = 122/264 (46%), Gaps = 11/264 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+N +RAR+  +  W++   PDI+ LQE K  +  FP++ L  L YH    GQK
Sbjct: 1   MKIATWNINGMRARLDFVLHWLRARQPDIVGLQELKLTEDQFPYDALSELGYHAVVVGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           ++NGVA+LS+     +   LPG D             +    +     Y P+G   +   
Sbjct: 61  AWNGVAVLSREPAELVHAGLPGQDELGARLVC-----VRVADMAFTTAYCPNGKSTSHPD 115

Query: 124 YDDKISWIKRFLRF---ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
           +  K+ W    +      S+        +  GD+N+ P P D YN  +       T   R
Sbjct: 116 FLRKLGWFDALIGQLGTLSEVAGASAGAVLCGDFNLCPTPLDSYNEDLLRGSIFHTDAER 175

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           + +Q++ + GF D  RA H     +S+WDY   ++ K +G+RID ++ + +  +      
Sbjct: 176 ERYQRILDHGFVDLFRAAHPEERAFSWWDYRGGAFHKRQGLRIDFVLGTADIAARTERVE 235

Query: 241 IDTKPRG---WTKPSDHTPVIVSL 261
           ID   R        SDH PVI  L
Sbjct: 236 IDRTYRKKHDGLTASDHAPVIAEL 259


>gi|312144054|ref|YP_003995500.1| exodeoxyribonuclease III Xth [Halanaerobium sp. 'sapolanicus']
 gi|311904705|gb|ADQ15146.1| exodeoxyribonuclease III Xth [Halanaerobium sp. 'sapolanicus']
          Length = 254

 Score =  190 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 77/262 (29%), Positives = 122/262 (46%), Gaps = 12/262 (4%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN IRA        WI+E  PD++ LQE + + +    +      YH      
Sbjct: 1   MRIYSWNVNGIRAVNRKGFLDWIEEEKPDVLALQEIRIQPEQLKDKLKNIDGYHSYFNYG 60

Query: 63  KS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           +   Y+GVAI SK +P+++      +  D + R I A +        + N+Y P+G   +
Sbjct: 61  EKAGYSGVAIYSKEEPLDVWKGFGIERFDYEGRVIAAEYP----EFYLLNIYFPNGK-SS 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             + + K+ +    L +A +  E  + ++ +GDYN    P D  NP   +N + F    R
Sbjct: 116 KERLNYKLDFYDATLEYAEELREEGKGVVVSGDYNTAHHPLDLKNPDANKNTSGFLEIER 175

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           +   KL+N GF D  R  +     YS+W Y   +  +N G RID+  +S E    L+ + 
Sbjct: 176 EWLDKLENHGFIDTYRYFYPDKETYSWWSYRTRARERNAGWRIDYHFISEELEDNLNHSD 235

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I T   G    SDH PV V L 
Sbjct: 236 ILTDVMG----SDHCPVTVDLK 253


>gi|160933576|ref|ZP_02080964.1| hypothetical protein CLOLEP_02430 [Clostridium leptum DSM 753]
 gi|156867453|gb|EDO60825.1| hypothetical protein CLOLEP_02430 [Clostridium leptum DSM 753]
          Length = 261

 Score =  190 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 71/261 (27%), Positives = 117/261 (44%), Gaps = 12/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +      + ++ + DI CLQETK +        L     +  +  +
Sbjct: 12  MRFISWNVNGLRACLTKGFPEFFQQIDADIFCLQETKLQQGQVEM-VLPGYRQYWNSAVK 70

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G A+ SK +P+ +   L  ++ D + R I   F     T             ++  
Sbjct: 71  KGYSGTAVFSKKEPLSVSYGLGIEEHDQEGRVITLEFPAFYLTTVYTPNSQEGLKRLSYR 130

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +   R   + L+ ++P++  GD N+  Q  D  NP     +A FT E R+ 
Sbjct: 131 M------EWEDAFRDYLKGLDSKKPVVVCGDMNVAHQEIDLKNPKTNRKNAGFTDEERER 184

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F +L   GF D+ R+ +     YS+W Y  ++   N G RID+ ++S      +  A+I 
Sbjct: 185 FSQLLAAGFIDSYRSLYPEKIEYSWWSYRFNARKNNAGWRIDYFLVSDRIGGRIQDAKIH 244

Query: 243 TKPRGWTKPSDHTPVIVSLDI 263
           T+  G    SDH PV + LDI
Sbjct: 245 TQVMG----SDHCPVELDLDI 261


>gi|67458642|ref|YP_246266.1| exodeoxyribonuclease III [Rickettsia felis URRWXCal2]
 gi|67004175|gb|AAY61101.1| Exodeoxyribonuclease III [Rickettsia felis URRWXCal2]
          Length = 260

 Score =  190 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 97/259 (37%), Positives = 144/259 (55%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+NSI+ R++ L  ++ + NPDI+ LQE K E + FPF+ L  L Y+    GQK
Sbjct: 1   MKIATWNINSIKTRLNLLRNFLSKENPDILLLQEIKCETEKFPFDELSDLPYNFYVHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           SYNGVAI+SK+   EI+   P +    QARF+E   ++      I +LY P+G+ + S K
Sbjct: 61  SYNGVAIISKFPADEIIKDFPNNYCSDQARFLEIKLSLPIGFCNIISLYAPNGSFVGSDK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+++   F+ + S +   +E  I  GD+NI P   D Y+P       CFT   ++  
Sbjct: 121 FVAKLAFYDNFINYLSTKKSFDEKTIIGGDFNIAPFDIDVYSPKALAETTCFTEIEQKKL 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + + N GF D  R  H +   +S+WDY A  + +NKG+RID I+        L +  +D 
Sbjct: 181 RTILNSGFEDLYRLRHPSKQEFSWWDYRAGCFEQNKGMRIDMILGCNNTIDYLENCYMDY 240

Query: 244 KPRGWTKPSDHTPVIVSLD 262
             R   KPSDH PVI S  
Sbjct: 241 NLRTQEKPSDHIPVIASFK 259


>gi|261854637|ref|YP_003261920.1| exodeoxyribonuclease III Xth [Halothiobacillus neapolitanus c2]
 gi|261835106|gb|ACX94873.1| exodeoxyribonuclease III Xth [Halothiobacillus neapolitanus c2]
          Length = 257

 Score =  190 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 78/258 (30%), Positives = 134/258 (51%), Gaps = 2/258 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+  R   + +W+ +  P I+ LQE K  ++        ++ Y     GQK
Sbjct: 1   MKIATWNVNSLNVRKPQVLSWLAQQQPAILGLQELKQVNEAIDNSDFAAMGYQTLLNGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVA++ + +  E    +         +            LR+ N Y+ +G  I S K
Sbjct: 61  TYNGVALIYQEELGEPSDVVCDIPALDDPQ--RRVIAATFGELRVINAYVVNGEAIDSEK 118

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K++W++ F  + +  +     L+  GD+NI P   D ++P  +++    +   R  F
Sbjct: 119 YQYKLNWLEAFSNWLALEIAQHPNLVVMGDFNIAPSDADVFDPERFKDAVLCSPPERDYF 178

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            +L  MGFTDA+    +  + +++WDY    + +N G+RIDHI+ SP   +   +  +D 
Sbjct: 179 NRLLAMGFTDALNCFSNEENNFTWWDYRGGGYRRNHGLRIDHILTSPAVQAKATACHVDK 238

Query: 244 KPRGWTKPSDHTPVIVSL 261
           +PRGW +PSDH PV+++L
Sbjct: 239 EPRGWERPSDHAPVVLTL 256


>gi|270290148|ref|ZP_06196374.1| exodeoxyribonuclease III [Pediococcus acidilactici 7_4]
 gi|270281685|gb|EFA27517.1| exodeoxyribonuclease III [Pediococcus acidilactici 7_4]
          Length = 251

 Score =  190 bits (482), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 71/262 (27%), Positives = 120/262 (45%), Gaps = 13/262 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +         E + DI C+QETK ++     + L   + +     +
Sbjct: 1   MKLISWNVNGLRAAVKHGFLDVFNELDADIFCVQETKLQEGQIDLD-LPGYHQYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G A+ +K +P+ +   L   + D + R I   +                 +     
Sbjct: 60  KGYSGTAVFTKREPVAVSYGLGIPEFDQEGRVITLEYEEF-----FLVTCYTPNSQPELR 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           + D +++W   F  +  Q L   +P+IF GD N+  +  D  N     ++A FT E RQ 
Sbjct: 115 RLDYRMNWDDAFRAYVKQ-LADTKPVIFCGDLNVAHEEIDLKNDRTNHHNAGFTDEERQK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L   GFTD  R  +     +YS+W Y  ++ + N G RID+ + S      L  A+I
Sbjct: 174 FTELLQSGFTDTYRYFYPDKEGVYSWWSYRFNARANNAGWRIDYFVTSQALDKQLADAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
            T+  G    SDH P+ + L++
Sbjct: 234 HTEIFG----SDHCPIELDLNL 251


>gi|169347307|ref|ZP_02866245.1| hypothetical protein CLOSPI_00022 [Clostridium spiroforme DSM 1552]
 gi|169293924|gb|EDS76057.1| hypothetical protein CLOSPI_00022 [Clostridium spiroforme DSM 1552]
          Length = 252

 Score =  189 bits (481), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 67/263 (25%), Positives = 113/263 (42%), Gaps = 13/263 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN IRA I       +K+ + DI C+QETK ++     E      Y + +  +
Sbjct: 1   MKLISWNVNGIRACINKGFYDILKDFDADIFCIQETKMQEGQIEIEDHGYYLY-MNSAVK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G  + +K +P+     +  ++ D + R I   +       +   +     N     
Sbjct: 60  KGYSGTLVFTKVKPLSYSYGINIEEHDQEGRVITLEYN------KFYLVNCYTPNSQDGL 113

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           K  +     +       + LE ++P+I  GD N+  Q  D  NP     +A F+ E R  
Sbjct: 114 KRLEYRQVWEDDFLAYLKSLEEKKPVILCGDLNVAHQEIDLKNPKTNRKNAGFSDEERAK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             +L N GF D  R  +      YS+W Y  ++   N G RID+ ++S      +  A I
Sbjct: 174 MTQLLNHGFIDTFRYLYPDLQGAYSWWSYRFNARKNNAGWRIDYFIVSDCLKEKIKDAYI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLDIP 264
                G    SDH PV + +++ 
Sbjct: 234 FKDIMG----SDHCPVGLDIELD 252


>gi|82913491|ref|XP_728665.1| exodeoxyribonuclease III [Plasmodium yoelii yoelii str. 17XNL]
 gi|23485131|gb|EAA20230.1| exodeoxyribonuclease III [Plasmodium yoelii yoelii]
          Length = 271

 Score =  189 bits (481), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 82/264 (31%), Positives = 129/264 (48%), Gaps = 13/264 (4%)

Query: 4   VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET--C 60
           + + T NVN IR A       W+ + N DI+CLQE K +      E     +Y       
Sbjct: 15  MRIITLNVNGIRSAARKGFFDWLPKQNADIVCLQEIKAQTTQLNDELFWPESYACYYLEA 74

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GVA+ ++ +P +++  L  DD+D +AR++EA F      L + +LY+P G+   
Sbjct: 75  EKKGYSGVALYARKEPDDVIQGLGWDDMDTEARYLEARFG----ELSVVSLYIPSGSSSE 130

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
                 K  ++ RFL F           IF GD+NI  +P D  N    + ++ F  E R
Sbjct: 131 QR-QAVKFXFLDRFLPFLDDCARSGRQYIFCGDWNIAHKPIDLKNWRSNQKNSGFLPEER 189

Query: 181 QS-FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
               +  +  G+ DA RA +     Y++W     +W+KN G RID+ ++SP    L+ SA
Sbjct: 190 AWLDRVFEEAGWVDAFRAVNPEPEQYTWWSNRGQAWAKNVGWRIDYQVVSPGLRELIRSA 249

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
            I  + R     SDH P+I+  D+
Sbjct: 250 AIYKEER----FSDHAPLIIDYDL 269


>gi|326772453|ref|ZP_08231737.1| exodeoxyribonuclease III [Actinomyces viscosus C505]
 gi|326637085|gb|EGE37987.1| exodeoxyribonuclease III [Actinomyces viscosus C505]
          Length = 269

 Score =  189 bits (481), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 73/270 (27%), Positives = 121/270 (44%), Gaps = 16/270 (5%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSIR R+  + A+++  + D + +QE K     FP E  ++  Y +   G  
Sbjct: 1   MRLATWNVNSIRTRVDRVLAFLEREDIDALAMQEIKCRPDQFPVEPFEAAGYELAIHGLN 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-----------TQTLRIGNLY 112
            +NGVAI S+    ++    PG          E                    +R+ +LY
Sbjct: 61  QWNGVAIASRVGLDDVAVSFPGQPAWAAKPEAEPVVEARALGATVGAASDAAPVRLWSLY 120

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWE 170
           +P+G  +T   Y  K+ W++      +  LE +  L     GD+N+ P+  D ++   +E
Sbjct: 121 VPNGRELTHPHYTYKLDWLRVLRDDVAAWLEADPDLPLALVGDWNVAPRDEDVWDMSAFE 180

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230
                +   R++F     +G  +  R   +    Y++WDY    + +N+G+RID +  SP
Sbjct: 181 GATHVSEPEREAFAAFAEVGMREVTR---ERVTNYTYWDYQKLRFPRNEGMRIDFVYASP 237

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
                +  A ID   R     SDH PVIV 
Sbjct: 238 ALAGRVTDAAIDRDERKGKGASDHVPVIVE 267


>gi|238650992|ref|YP_002916848.1| exodeoxyribonuclease III [Rickettsia peacockii str. Rustic]
 gi|238625090|gb|ACR47796.1| exodeoxyribonuclease III [Rickettsia peacockii str. Rustic]
          Length = 260

 Score =  189 bits (481), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 97/259 (37%), Positives = 144/259 (55%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+NSI+ R++ L  ++ + NPDI+ LQE K E   FPF+ L  L Y+    GQK
Sbjct: 1   MKIATWNINSIKTRLNLLRNFLSKENPDILLLQEIKCETAKFPFDALSDLPYNSYVHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           SYNGVAI+SK+   EI+   P +    QARF+E   ++      I +LY P+G+ + S K
Sbjct: 61  SYNGVAIISKFPADEIIKDFPNNYCSDQARFLEIKLSLPIGFCNIISLYAPNGSFVGSDK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+++   F+ + S +   +E  I  GD+NI P   D Y+P +     CFT   ++  
Sbjct: 121 FVAKLAFYDNFINYLSTKKSFDEKTIIGGDFNIAPFDIDVYSPKLLAETTCFTEVEQKKL 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + + N GF D  R  H +   +S+WDY A  + +NKG+RID I+        L +  +D 
Sbjct: 181 RTILNSGFEDLYRLMHPSKQEFSWWDYRAGCFEQNKGMRIDMILGCNNTIDYLENCYMDY 240

Query: 244 KPRGWTKPSDHTPVIVSLD 262
             R   KPSDH PVI S  
Sbjct: 241 NLRTQEKPSDHIPVIASFK 259


>gi|269791683|ref|YP_003316587.1| exodeoxyribonuclease III Xth [Thermanaerovibrio acidaminovorans DSM
           6589]
 gi|269099318|gb|ACZ18305.1| exodeoxyribonuclease III Xth [Thermanaerovibrio acidaminovorans DSM
           6589]
          Length = 259

 Score =  189 bits (481), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 80/264 (30%), Positives = 123/264 (46%), Gaps = 6/264 (2%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           MS+  V T+NVNSI+AR+  + A +    PD++CLQETKT D+ FP E  ++  Y +   
Sbjct: 1   MSIFKVVTFNVNSIKARVPIVEALLDREGPDVLCLQETKTVDREFPREIFEARGYRVLVR 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           G K+YNGVA   + +  +     P  +     R +            + N Y+P G  I 
Sbjct: 61  GMKAYNGVAAAIRGEEQDSFAGFPSGEEMDPYRLLGVRLDGM----WLVNCYVPQGKEID 116

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
              Y  K+ ++ R        LE +  ++  GD N+ P   D  NP    +  CF  +VR
Sbjct: 117 HPDYAYKLRFLSRLAELVR-ELEGDGEVLLVGDLNVAPTEADVTNPKNKADHVCFHRDVR 175

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYY-ADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           ++F+ L   G  D  R        +SFWDY    +  +N G RIDHI+ +         +
Sbjct: 176 EAFEGLLGAGLVDVFRRHRPGEGEFSFWDYRVKGALERNIGWRIDHILATRGLADRSVDS 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
            +    R   +PSDH PV+   ++
Sbjct: 236 AVLRDYRAMERPSDHGPVMGVFEL 259


>gi|241068614|ref|XP_002408486.1| Apurinic/apyrimidinic endonuclease, putative [Ixodes scapularis]
 gi|215492474|gb|EEC02115.1| Apurinic/apyrimidinic endonuclease, putative [Ixodes scapularis]
          Length = 266

 Score =  189 bits (481), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 97/259 (37%), Positives = 145/259 (55%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + TWN+NSI+ R++ L  ++ + NPDI+ LQE K E + FPF+ L +L Y+    GQK
Sbjct: 5   MKIVTWNINSIKTRLNLLRNFLSKENPDILLLQEIKCETEKFPFDELSNLPYNFYVHGQK 64

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           SYNGVAI+SK+   EI+   P +    QARF+E   ++      I +LY P+G+ I S K
Sbjct: 65  SYNGVAIISKFPADEIIKDFPNNYYSDQARFLEIKLSLPIGFCNIISLYAPNGSFIGSDK 124

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+++   F+ + S +   +E  I  GD+NI P   D Y+P +     CFT   ++  
Sbjct: 125 FVAKLAFYDNFINYLSTKKSFDEKTIIGGDFNIAPFDIDVYSPKLLAETTCFTEIEQKKL 184

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + + N GF D  R  H +   +S+WDY A  + +NKG+RID I+        L +  +D 
Sbjct: 185 RTILNSGFEDLYRLMHPSKQEFSWWDYRAGCFEQNKGMRIDMILGCNNTIDYLENCYMDY 244

Query: 244 KPRGWTKPSDHTPVIVSLD 262
             R   KPSDH PVI S  
Sbjct: 245 NLRTQEKPSDHIPVIASFK 263


>gi|237786239|ref|YP_002906944.1| exodeoxyribonuclease III [Corynebacterium kroppenstedtii DSM 44385]
 gi|237759151|gb|ACR18401.1| exodeoxyribonuclease III [Corynebacterium kroppenstedtii DSM 44385]
          Length = 262

 Score =  189 bits (481), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 67/265 (25%), Positives = 119/265 (44%), Gaps = 11/265 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS+R R+  +   +  ++ D++ +QETK  +  FP +      Y +   G  
Sbjct: 1   MRLATWNVNSVRTRLPRIIDVLNRHDIDVLAMQETKCSEDQFPRDAFTDAGYEVAVSGTN 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDV----QARFIEATFTINTQTLRIGNLYLPHGNPI 119
            +NGVAI S+    ++ T             +      +       + + +LY+P+G  I
Sbjct: 61  QWNGVAIASRVGLTDVHTLPHQPGFSKELTAEQAIEPRSIAATCGGIIVMSLYIPNGREI 120

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL 177
           ++  +  K+ ++     +A+  ++ +  L     GD+NI P   D ++P  +      T 
Sbjct: 121 SNIHFTYKLRFLDAVRNYAATAVDNDPELRLALVGDWNIAPHDTDVWDPQFFVGHTQVTP 180

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
             R +   L++ GFTD    +      Y++WDY A  + +N+G+RID    SP       
Sbjct: 181 RERNALTALEDEGFTDVTHNSG-----YTYWDYTAGRFGRNQGMRIDVQWASPALAENAG 235

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLD 262
              +    R     SDH P+IV  D
Sbjct: 236 EVSVYKDERAAKGSSDHAPLIVDYD 260


>gi|166710239|ref|ZP_02241446.1| exodeoxyribonuclease III [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 259

 Score =  189 bits (481), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 86/259 (33%), Positives = 135/259 (52%), Gaps = 6/259 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A+WNVNS+  R+ +L  W+    P+++ +QETK ED  FP   L  L Y    CGQK
Sbjct: 1   MKIASWNVNSLNVRLPHLQQWLTAFAPEVVGIQETKLEDHRFPDAALAELGYRSVFCGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAILS+   +++   +PG D   Q              +RI NLY+ +G  + + K
Sbjct: 61  TYNGVAILSRSPALDVQMGIPGFDDVQQRVIAATVDG-----VRIINLYVVNGQDVGTDK 115

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN-PIIWENDACFTLEVRQS 182
           Y  K+ W+     + +Q L+    L+  GD+NI P   D ++  +  E+    + + R +
Sbjct: 116 YAYKLRWLAAAHDWIAQELQTYPQLVVLGDFNIAPDARDVHDATVWNEHHILTSTDERAA 175

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
            +KL  +G  DA R        +S+WDY    + +N G+RID  ++S    +    + ID
Sbjct: 176 LEKLLALGLHDAFRLHTQDAEHFSWWDYRQAGFRRNLGLRIDLTLVSDALRTRAVESGID 235

Query: 243 TKPRGWTKPSDHTPVIVSL 261
            +PR W +PSDH P  V L
Sbjct: 236 REPRTWERPSDHAPAWVRL 254


>gi|330996654|ref|ZP_08320532.1| exodeoxyribonuclease III [Paraprevotella xylaniphila YIT 11841]
 gi|329572726|gb|EGG54359.1| exodeoxyribonuclease III [Paraprevotella xylaniphila YIT 11841]
          Length = 250

 Score =  189 bits (481), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 74/260 (28%), Positives = 114/260 (43%), Gaps = 13/260 (5%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA             + D  CLQETK ++     E  +    +     +
Sbjct: 1   MKFISWNVNGLRACCEKGFKESFAALDADFFCLQETKMQEGQLDLE-FEGYRSYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI S++ P+ +   L  ++ D + R I                     +     
Sbjct: 60  KGYSGTAIFSRHAPLNVTYGLGLEEHDREGRVITLEMPDF-----FLVTVYTPNSQDGLK 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           + D ++ W + F  +  Q L+  +P+I  GD N+  +  D  NP     +A FT E R+ 
Sbjct: 115 RLDYRMQWEEAFRAYLLQ-LDTRKPVIVCGDLNVAHREIDLKNPKSNRKNAGFTDEEREK 173

Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F  L + GFTD  R  +     +YS+W Y   +  KN G RID+ ++S    + L SA I
Sbjct: 174 FGILLDSGFTDTFRFFYPDREGIYSWWSYRFKAREKNAGWRIDYFLVSKRLEAQLKSATI 233

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
            T+  G    SDH PV V L
Sbjct: 234 HTEIFG----SDHCPVEVDL 249


>gi|303237381|ref|ZP_07323951.1| exodeoxyribonuclease III [Prevotella disiens FB035-09AN]
 gi|302482768|gb|EFL45793.1| exodeoxyribonuclease III [Prevotella disiens FB035-09AN]
          Length = 250

 Score =  189 bits (481), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 68/260 (26%), Positives = 111/260 (42%), Gaps = 12/260 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +        +  + D  CLQETK +              +     +
Sbjct: 1   MKFISWNVNGLRACVTKGFKESFEAIDADFFCLQETKMQAGQLDI-AFDGYESYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K+QP+ +   L  ++ D + R I                     +     
Sbjct: 60  KGYSGTAIFTKHQPLNVTYGLGIEEHDHEGRVITLEMENFYL-----VTCYTPNSQDGLK 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           + + ++ W   F  +  + L+ ++P+I  GD N+  +  D  NP     +A F+ E R  
Sbjct: 115 RLEYRMRWEDDFQTYIKR-LDEKKPVIVCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAK 173

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
             +    GF D+ R  +     YS+W Y   +  KN G RID+ +LS    + L  A+I 
Sbjct: 174 MTQFLGKGFIDSFRTLYPEQVTYSWWSYRFKAREKNAGWRIDYFLLSDRLRAQLVDAKIH 233

Query: 243 TKPRGWTKPSDHTPVIVSLD 262
           T+  G    SDH PV V L+
Sbjct: 234 TEVYG----SDHCPVEVELN 249


>gi|288560813|ref|YP_003424299.1| exodeoxyribonuclease III Xth2 [Methanobrevibacter ruminantium M1]
 gi|288543523|gb|ADC47407.1| exodeoxyribonuclease III Xth2 [Methanobrevibacter ruminantium M1]
          Length = 258

 Score =  189 bits (481), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 66/267 (24%), Positives = 122/267 (45%), Gaps = 13/267 (4%)

Query: 1   MSVVTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HI 57
           M+ + + +WNVN IRA        W  E   DI+ LQETK + +  P + +    Y  + 
Sbjct: 1   MTKIRLISWNVNGIRAIHKKGFLDWFNEEKADIVNLQETKAKIEQLPKKLINVPGYTSYF 60

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
            +  +  Y+GVA  +  +P E++  +  +  D++ R I   F        + N+Y P+G 
Sbjct: 61  HSAERGGYSGVATYTSIEPNEVINGMGIEKFDIEGRLIRLDFD----DFTLLNIYYPNGG 116

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
                +   K+ +   FL +A+   +  + L+  GD N   +  D   P   E+ + F  
Sbjct: 117 -RDEERLQYKLDFYDAFLDYANDLRDQGKNLVICGDLNTAHKEIDLARPKQNEDVSGFLP 175

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHL-YSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
             R+   K  + G+ D  R  H+     Y++W Y   +  +N G R+D+  ++ E    +
Sbjct: 176 IEREWVSKFLDNGYVDTFRMLHENEKEKYTWWSYRTRARERNVGWRLDYFFVNEEFKDNV 235

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263
            ++ I ++  G    SDH P+ + ++I
Sbjct: 236 RASYIISEVMG----SDHCPIALEIEI 258


>gi|260655439|ref|ZP_05860927.1| exodeoxyribonuclease III [Jonquetella anthropi E3_33 E1]
 gi|260629887|gb|EEX48081.1| exodeoxyribonuclease III [Jonquetella anthropi E3_33 E1]
          Length = 259

 Score =  189 bits (481), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 83/262 (31%), Positives = 123/262 (46%), Gaps = 7/262 (2%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
              V T+NVNS+R+R+  L  W+     D++C+QETK  D  FP   ++++ YH    GQ
Sbjct: 2   TFRVGTFNVNSLRSRLPVLERWLPTAGVDVLCVQETKVTDDQFPVAEVEAMGYHAVFAGQ 61

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           KSYNGVA+LS+  P E V+         +         +    L I N Y+P G  I   
Sbjct: 62  KSYNGVAVLSRRAPDESVSGFNDSQ---EPNADSRLLAVRFGDLWIFNSYVPQGKAIDHP 118

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
            Y  K  ++ R     + RL      +   +    P           + D    ++  + 
Sbjct: 119 DYQYKKEFLSRLSGLVAARLPGNVLWVGDLNVAPTPLDVTN---PTNKKDHVCFIQELRD 175

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYY-ADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
              L+     D +R  HD   LYSF+DY   ++  +N G RIDH++ SP    L  +  I
Sbjct: 176 LYALKTSALVDLLRRFHDGEELYSFFDYRVKNALERNIGWRIDHMLASPALAGLCRNCWI 235

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
           D +PRGW KPSDHTP++   D+
Sbjct: 236 DKEPRGWEKPSDHTPMLADFDL 257


>gi|170750144|ref|YP_001756404.1| exodeoxyribonuclease III Xth [Methylobacterium radiotolerans JCM
           2831]
 gi|170656666|gb|ACB25721.1| exodeoxyribonuclease III Xth [Methylobacterium radiotolerans JCM
           2831]
          Length = 269

 Score =  189 bits (481), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 78/267 (29%), Positives = 122/267 (45%), Gaps = 7/267 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62
           +TV TWN+NS+R RI  +  ++ E+ PD++CLQETK  D  FP + L+   Y H+   GQ
Sbjct: 3   LTVTTWNINSVRLRIDLVLRFLAEHKPDVLCLQETKCPDDAFPLKALRGSGYEHVMFAGQ 62

Query: 63  KSYNGVAILSKYQ-PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           K YNGVAILS++      V              +          + + + Y+P G  +  
Sbjct: 63  KGYNGVAILSRFPLHTRSVMGFCERQDARHISAVLGPEAGAASGIVLHDFYVPAGGDVPD 122

Query: 122 TKYDDKISWIKRFLRFASQR--LELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-E 178
              + K +    FL          +  P I  GD N+ P  HD ++     +    T  E
Sbjct: 123 RDLNPKFAHKLDFLSELRAWGGKRVSGPAILVGDLNVAPLEHDVWSHKQLLDVVSHTPLE 182

Query: 179 VRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLL 236
                      G+ DA R        +Y++W Y +  W + NKG R+DH  +SP+    +
Sbjct: 183 TEALEVLRGEAGWIDAARHLTPEPEKIYTWWSYRSPDWSAANKGRRLDHAWVSPDLAGTV 242

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263
               +  + R W +PSDH PV ++L++
Sbjct: 243 RKVEVLREARAWERPSDHAPVTLTLEL 269


>gi|27379180|ref|NP_770709.1| exodeoxyribonuclease III [Bradyrhizobium japonicum USDA 110]
 gi|27352331|dbj|BAC49334.1| exodeoxyribonuclease III [Bradyrhizobium japonicum USDA 110]
          Length = 256

 Score =  189 bits (481), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 88/258 (34%), Positives = 134/258 (51%), Gaps = 3/258 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+N+N+I  R+ NL AW++   PD++ LQE K  D  FP   ++   Y     GQK
Sbjct: 1   MKIATFNINNINRRLPNLLAWMRAAKPDVVALQELKASDGEFPAAAIEKAGYGAVWRGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           ++NGVAIL++     +                        + + + ++YLP+GNP    K
Sbjct: 61  TWNGVAILARDAEPILTRDRL---PGGSDDHEARYIEAAVRGIIVTSIYLPNGNPQPGPK 117

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +D K+ W  R  R A   ++ + P++ AGDYN+ P   D Y    W+ DA    + R +F
Sbjct: 118 FDYKLDWFARLKRHAKTFIKQDLPVVLAGDYNVAPTAIDIYPTRSWDKDALIQPKSRAAF 177

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             L   G+ DAIR  H    +Y+FWDY  + W ++ G+R+DH++LSP   S L  A +D 
Sbjct: 178 ASLVAQGWGDAIRELHPDKRIYTFWDYKRNRWPRDAGLRLDHLLLSPALISRLAKAGVDK 237

Query: 244 KPRGWTKPSDHTPVIVSL 261
           K RG    SDH P  + L
Sbjct: 238 KVRGEDGASDHAPAWIVL 255


>gi|150005146|ref|YP_001299890.1| exodeoxyribonuclease [Bacteroides vulgatus ATCC 8482]
 gi|254883281|ref|ZP_05255991.1| exodeoxyribonuclease [Bacteroides sp. 4_3_47FAA]
 gi|294778957|ref|ZP_06744373.1| exodeoxyribonuclease III [Bacteroides vulgatus PC510]
 gi|319642656|ref|ZP_07997302.1| exodeoxyribonuclease [Bacteroides sp. 3_1_40A]
 gi|149933570|gb|ABR40268.1| exodeoxyribonuclease [Bacteroides vulgatus ATCC 8482]
 gi|254836074|gb|EET16383.1| exodeoxyribonuclease [Bacteroides sp. 4_3_47FAA]
 gi|294447266|gb|EFG15850.1| exodeoxyribonuclease III [Bacteroides vulgatus PC510]
 gi|317385744|gb|EFV66677.1| exodeoxyribonuclease [Bacteroides sp. 3_1_40A]
          Length = 252

 Score =  189 bits (481), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 69/263 (26%), Positives = 108/263 (41%), Gaps = 13/263 (4%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++   +WNVN +RA               D  CLQETK ++     +  +  + +     
Sbjct: 1   MLKFISWNVNGLRACYDKGFVDVFHRLEADFFCLQETKMQEGQLDAK-FEGYHSYWNYAE 59

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G AI SK +P+ +   L  ++ D + R I                       +  
Sbjct: 60  KKGYSGTAIFSKVKPLSVTYGLGIEEHDHEGRVITLELESFYLITVYTPNSQEELRRLDY 119

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
                     +   R   ++LE ++P+I  GD N+  +  D  NP     +A FT E R 
Sbjct: 120 RM------KWEDDFRAYLKKLEEKKPVIVCGDLNVAHKEIDLKNPKTNRKNAGFTDEERA 173

Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            F  L   GFTD  R  +     +YS+W Y   +  KN G RID+ + S      L  A 
Sbjct: 174 KFTTLLESGFTDTFRYFYPEQEGIYSWWSYRFKAREKNSGWRIDYFLTSDSLKDRLKGAH 233

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263
           I T   G    SDH PV +++++
Sbjct: 234 IYTDIFG----SDHCPVELTIEL 252


>gi|290789946|pdb|3G00|A Chain A, Mth0212 In Complex With A 9bp Blunt End Dsdna At 1.7
           Angstrom
 gi|290789947|pdb|3G00|B Chain B, Mth0212 In Complex With A 9bp Blunt End Dsdna At 1.7
           Angstrom
 gi|290789951|pdb|3G0R|A Chain A, Complex Of Mth0212 And An 8bp Dsdna With Distorted Ends
 gi|290789952|pdb|3G0R|B Chain B, Complex Of Mth0212 And An 8bp Dsdna With Distorted Ends
 gi|290789960|pdb|3G2D|A Chain A, Complex Of Mth0212 And A 4 Bp Dsdna With 3'-Overhang
 gi|290789961|pdb|3G2D|B Chain B, Complex Of Mth0212 And A 4 Bp Dsdna With 3'-Overhang
 gi|290789966|pdb|3G38|A Chain A, The Catalytically Inactive Mutant Mth0212 (D151n) In
           Complex With An 8 Bp Dsdna
 gi|290789983|pdb|3G8V|A Chain A, The Rationally Designed Catalytically Inactive Mutant
           Mth0212(D151n)
 gi|290789985|pdb|3GA6|A Chain A, Mth0212 In Complex With Two Dna Helices
 gi|290789986|pdb|3GA6|B Chain B, Mth0212 In Complex With Two Dna Helices
          Length = 265

 Score =  189 bits (481), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 64/260 (24%), Positives = 106/260 (40%), Gaps = 12/260 (4%)

Query: 1   MSVVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           M+V+ + +WNVN +RA        W  E  PDI+CLQE K   +  P +      Y    
Sbjct: 1   MAVLKIISWNVNGLRAVHRKGFLKWFMEEKPDILCLQEIKAAPEQLPRKLRHVEGYRSFF 60

Query: 60  CG--QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
               +K Y+GVA+ +K  P  +      +  D + R   A F        + N+Y P+G 
Sbjct: 61  TPAERKGYSGVAMYTKVPPSSLREGFGVERFDTEGRIQIADFD----DFLLYNIYFPNGK 116

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
                    K+ +   FL   ++  +    +I  G++N   +  D   P    N + F  
Sbjct: 117 MSEER-LKYKLEFYDAFLEDVNRERDSGRNVIICGNFNTAHREIDLARPKENSNVSGFLP 175

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
             R    K    G+ D  R  +     Y++W Y   +  +N G R+D+  ++ E    + 
Sbjct: 176 VERAWIDKFIENGYVDTFRMFNSDPGQYTWWSYRTRARERNVGWRLDYFFVNEEFKGKVK 235

Query: 238 SARIDTKPRGWTKPSDHTPV 257
            + I +   G    SDH P+
Sbjct: 236 RSWILSDVMG----SDHCPI 251


>gi|302876908|ref|YP_003845541.1| exodeoxyribonuclease III Xth [Clostridium cellulovorans 743B]
 gi|307687596|ref|ZP_07630042.1| exodeoxyribonuclease III Xth [Clostridium cellulovorans 743B]
 gi|302579765|gb|ADL53777.1| exodeoxyribonuclease III Xth [Clostridium cellulovorans 743B]
          Length = 253

 Score =  189 bits (480), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 71/261 (27%), Positives = 117/261 (44%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN IRA +      + K  + DI CLQETK +      + L+    +     +
Sbjct: 1   MKLISWNVNGIRACVEKGFLDFFKSVDADIFCLQETKLQQGQIDLD-LEGYEQYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G A+ +K +P+     L  ++ D + R I   +        +  +Y P+     + 
Sbjct: 60  KGYSGTAVFTKEKPLSASYGLNIEEHDKEGRVITLEYD----DFYLVTVYTPNSKEELAR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
              +     +   R   ++LE  +P+I  GD N+  +  D  NP     +  F+ E R  
Sbjct: 116 L--EYRMEWEDAFRAYLKKLEKNKPVIVCGDLNVAHKEIDLKNPKTNRKNPGFSDEERAK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L   GF D  R  +      YS+W Y  ++ +KN G RID+ ++S E    L SA I
Sbjct: 174 FSELLASGFIDTYRYFYPDKEGAYSWWSYRFNARTKNAGWRIDYFVISEELKDKLVSAEI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
             +  G    SDH PV + + 
Sbjct: 234 HNEILG----SDHCPVELVIK 250


>gi|239947023|ref|ZP_04698776.1| exodeoxyribonuclease III [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239921299|gb|EER21323.1| exodeoxyribonuclease III [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 262

 Score =  189 bits (480), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 97/259 (37%), Positives = 145/259 (55%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + TWN+NSI+ R++ L  ++ + NPDI+ LQE K E + FPF+ L +L Y+    GQK
Sbjct: 1   MKIVTWNINSIKTRLNLLRNFLSKENPDILLLQEIKCETEKFPFDELSNLPYNFYVHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           SYNGVAI+SK+   EI+   P +    QARF+E   ++      I +LY P+G+ I S K
Sbjct: 61  SYNGVAIISKFPADEIIKDFPNNYYSDQARFLEIKLSLPIGFCNIISLYAPNGSFIGSDK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+++   F+ + S +   +E  I  GD+NI P   D Y+P +     CFT   ++  
Sbjct: 121 FVAKLAFYDNFINYLSTKKSFDEKTIIGGDFNIAPFDIDVYSPKLLAETTCFTEIEQKKL 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + + N GF D  R  H +   +S+WDY A  + +NKG+RID I+        L +  +D 
Sbjct: 181 RTILNSGFEDLYRLMHPSKQEFSWWDYRAGCFEQNKGMRIDMILGCNNTIDYLENCYMDY 240

Query: 244 KPRGWTKPSDHTPVIVSLD 262
             R   KPSDH PVI S  
Sbjct: 241 NLRTQEKPSDHIPVIASFK 259


>gi|53802367|ref|YP_112853.1| exodeoxyribonuclease III [Methylococcus capsulatus str. Bath]
 gi|53756128|gb|AAU90419.1| exodeoxyribonuclease III [Methylococcus capsulatus str. Bath]
          Length = 257

 Score =  189 bits (480), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 82/264 (31%), Positives = 129/264 (48%), Gaps = 13/264 (4%)

Query: 4   VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET--C 60
           + + T NVN IR A       W+ + N DI+CLQE K +      E     +Y       
Sbjct: 1   MRIITLNVNGIRSAARKGFFDWLPKQNADIVCLQEIKAQTTQLNDELFWPESYACYYLEA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GVA+ ++ +P +++  L  DD+D +AR++EA F      L + +LY+P G+   
Sbjct: 61  EKKGYSGVALYARKEPDDVIQGLGWDDMDTEARYLEARFG----ELSVVSLYIPSGSSSE 116

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
                 K  ++ RFL F           IF GD+NI  +P D  N    + ++ F  E R
Sbjct: 117 QR-QAVKFGFLDRFLPFLDDCARSGRQYIFCGDWNIAHKPIDLKNWRSNQKNSGFLPEER 175

Query: 181 QS-FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
               +  +  G+ DA RA +     Y++W     +W+KN G RID+ ++SP    L+ SA
Sbjct: 176 AWLDRVFEEAGWVDAFRAVNPEPEQYTWWSNRGQAWAKNVGWRIDYQVVSPGLRELIRSA 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
            I  + R     SDH P+I+  D+
Sbjct: 236 AIYKEER----FSDHAPLIIDYDL 255


>gi|217035255|pdb|2VOA|A Chain A, Structure Of An Ap Endonuclease From Archaeoglobus
           Fulgidus
 gi|217035256|pdb|2VOA|B Chain B, Structure Of An Ap Endonuclease From Archaeoglobus
           Fulgidus
          Length = 257

 Score =  189 bits (480), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 85/262 (32%), Positives = 138/262 (52%), Gaps = 6/262 (2%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           ++ +AT+NVNSIR+R+H +  W+KEN PDI+C+QETK E++ FP      + YH+   G 
Sbjct: 1   MLKIATFNVNSIRSRLHIVIPWLKENKPDILCMQETKVENRKFPEADFHRIGYHVVFSGS 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K  NGVAI S  +P ++   L  +  D                + + N Y+P G  I S 
Sbjct: 61  KGRNGVAIASLEEPEDVSFGLDSEPKDEDRLIRA-----KIAGIDVINTYVPQGFKIDSE 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           KY  K+ W++R   +  + ++     ++ GD N+ P+P D ++P   +N   F  + R++
Sbjct: 116 KYQYKLQWLERLYHYLQKTVDFRSFAVWCGDMNVAPEPIDVHSPDKLKNHVXFHEDARRA 175

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYY-ADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           ++K+  +GF D +R  H    +Y+F+DY    +  +  G R D I+ +P           
Sbjct: 176 YKKILELGFVDVLRKIHPNERIYTFYDYRVKGAIERGLGWRGDAILATPPLAERCVDCYA 235

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
           D KPR   KPSDH P++   D+
Sbjct: 236 DIKPRLAEKPSDHLPLVAVFDV 257


>gi|71065757|ref|YP_264484.1| exonuclease III [Psychrobacter arcticus 273-4]
 gi|71038742|gb|AAZ19050.1| Exodeoxyribonuclease III [Psychrobacter arcticus 273-4]
          Length = 274

 Score =  189 bits (480), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 85/271 (31%), Positives = 132/271 (48%), Gaps = 10/271 (3%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +     +N+N IRAR H L A     +PD++ LQETK  D+ FP E ++ L YH+E  GQ
Sbjct: 1   MTRFVCFNINGIRARQHQLEAVRDIIDPDVMGLQETKVHDEQFPLENVEGLGYHVEYFGQ 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K++ GVAILSK  PI +    PG+D + Q RFI A +  + + + + N Y P G      
Sbjct: 61  KAHYGVAILSKVAPIFVQKGFPGEDAEAQKRFIHARYEFDGREIDVLNGYFPQGESQEHP 120

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175
            K+  K ++    + +          L+  GD NI P+  D           +      F
Sbjct: 121 TKFPMKRAYYADLMAYIDILKAEGRSLVVMGDMNIAPEDIDIGIGEVNAKRWLKNRKTSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHL-YSFWDYYADSWSKN--KGIRIDHIMLSPEA 232
             E R+ +  L +   TD  R  +      YS++DY +  +  +  +G+RIDHI+ +P+ 
Sbjct: 181 LPEEREWYSALMSRELTDTYRLHYPESTELYSWFDYRSRGFDDDPKRGLRIDHILCTPDL 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            +    A I  + R   KPSDH P+  + D+
Sbjct: 241 VAHCVDAGISYELRAMEKPSDHAPIWTAFDL 271


>gi|310779700|ref|YP_003968032.1| exodeoxyribonuclease III Xth [Ilyobacter polytropus DSM 2926]
 gi|309749023|gb|ADO83684.1| exodeoxyribonuclease III Xth [Ilyobacter polytropus DSM 2926]
          Length = 253

 Score =  189 bits (480), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 70/263 (26%), Positives = 113/263 (42%), Gaps = 14/263 (5%)

Query: 4   VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IET 59
           + + +WNVN IRA           ++ +PDI+CLQETK  ++       +   Y+   E+
Sbjct: 1   MKILSWNVNGIRAVEKKGAFQDVFEKLDPDILCLQETKASEEQLTDNIKKIPGYYSFFES 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GVA+ SK +P+ I         D              +   + N Y P+    
Sbjct: 61  AVKKGYSGVALYSKTKPLSIKNMGIDIFDDEGRYIEA-----KFENFTLINCYFPNSQEK 115

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                + K+++    L + +  +E  E ++  GDYNI  Q  D  NP     +  F  E 
Sbjct: 116 GKR-LEYKLNFCSDLLDYCNSLVENGENIVLCGDYNIAHQEIDLKNPKSNTKNPGFLPEE 174

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R+   K  N G+ D  R  +     Y++W Y   +  KN G RID+  ++ +  S +   
Sbjct: 175 REWMSKFLNSGYIDIFRYLYPNEIKYTWWSYRFKAREKNIGWRIDYHCVNKDFISTIKKV 234

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
            I     G    SDH PV++ L 
Sbjct: 235 EILDNITG----SDHCPVLIELK 253


>gi|256854033|ref|ZP_05559398.1| exodeoxyribonuclease [Enterococcus faecalis T8]
 gi|307290261|ref|ZP_07570177.1| exodeoxyribonuclease III [Enterococcus faecalis TX0411]
 gi|256710976|gb|EEU26019.1| exodeoxyribonuclease [Enterococcus faecalis T8]
 gi|306498682|gb|EFM68183.1| exodeoxyribonuclease III [Enterococcus faecalis TX0411]
 gi|315030444|gb|EFT42376.1| exodeoxyribonuclease III [Enterococcus faecalis TX4000]
          Length = 251

 Score =  189 bits (480), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 76/261 (29%), Positives = 115/261 (44%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +  N      E + D  CLQETK +      E L   + +     +
Sbjct: 1   MKCISWNVNGLRAVVKKNFMDVFNELDADFFCLQETKLQAGQIDLE-LPGYHQYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K + + +   L  +  D + R I   +                 +     
Sbjct: 60  KGYSGTAIFAKEEALSVRYGLGIETHDQEGRVITLEYPEF-----FMVTCYTPNSQAELK 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +   +++W   F  +    L  E+P+I  GD N+  Q  D  N    + +A FT E RQ 
Sbjct: 115 RLAYRMTWEDAFRAY-LNELNQEKPVILCGDLNVAHQNIDLKNWKTNQKNAGFTPEERQK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L + GFTD  R  +     +YS+W Y  ++   N G RID+ ++S      L SA+I
Sbjct: 174 FTELLDSGFTDTFRYFYPEAEGIYSWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            T   G    SDH PV V LD
Sbjct: 234 HTDILG----SDHCPVEVVLD 250


>gi|298206939|ref|YP_003715118.1| exodeoxyribonuclease [Croceibacter atlanticus HTCC2559]
 gi|83849573|gb|EAP87441.1| exodeoxyribonuclease [Croceibacter atlanticus HTCC2559]
          Length = 254

 Score =  189 bits (480), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 76/264 (28%), Positives = 132/264 (50%), Gaps = 14/264 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY---HIET 59
           + + ++NVN IRA +  +L +W+ + + D++CLQE K     F       + Y   +   
Sbjct: 1   MKIVSYNVNGIRAAMRKDLISWLSQTDADVVCLQEIKANPDQFDETEFHDIGYKYCYWYP 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GVA+L K +P  +        +D + R I A F      + + ++YLP G   
Sbjct: 61  AQKKGYSGVALLCKTKPNHVEYGTGIATMDFEGRNIRADF----NDVSVMSMYLPSG--T 114

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
            S + D K++++  FL ++         L+  GDYNI  +P D ++P+  +N + F    
Sbjct: 115 NSARLDFKLNYMDEFLEYSKNLRHSIPNLVVCGDYNICHKPEDIHDPVRLKNVSGFLPVE 174

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R    K  + GF D+ R  +D    Y++W Y A++ + NKG R+D++M++P     L  +
Sbjct: 175 RDWLTKFIDSGFIDSFRVFNDQPENYTWWSYRANARANNKGWRLDYLMVTPPLQEKLKRS 234

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
            I          SDH PV++ LD+
Sbjct: 235 VILKDA----VHSDHCPVLLELDL 254


>gi|331006597|ref|ZP_08329884.1| Exodeoxyribonuclease III [gamma proteobacterium IMCC1989]
 gi|330419581|gb|EGG93960.1| Exodeoxyribonuclease III [gamma proteobacterium IMCC1989]
          Length = 272

 Score =  189 bits (480), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 85/271 (31%), Positives = 133/271 (49%), Gaps = 11/271 (4%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           ++   ++NVNSIR RI  L A I++++PD I LQETK  D +FP + ++ + YH++  GQ
Sbjct: 1   MIKAISFNVNSIRQRIPQLEALIEKHDPDFIGLQETKVTDVDFPVDVIEKMGYHVQFHGQ 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-TQTLRIGNLYLPHGNPITS 121
           K++ GVA++SK+  + +      DD + Q RFI   F       + + N Y P G     
Sbjct: 61  KTHYGVALMSKHPFLSVQKGYDTDDDEAQKRFISGRFVSPLGGEITVVNGYFPQGESQDH 120

Query: 122 T-KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDAC 174
             K+ +K  + +    +  +    E+ LI  GD NI P+        D     +      
Sbjct: 121 PTKFANKKKYYEDLDSYLCRNHTPEDQLIVMGDMNISPEDQDIGIGEDNRKRWLKTGKCS 180

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLY-SFWDYYADSWSK--NKGIRIDHIMLSPE 231
           F    R+   KL N G TD  R  H T   Y S++DY +  + +   +G+RID I+ +  
Sbjct: 181 FLPIEREWLAKLYNWGLTDTYRLLHPTGSDYFSWFDYRSRGFEREPKRGLRIDLILATES 240

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
               +  + ID + RG  KPSDH P+    D
Sbjct: 241 LAKTVTESGIDYEIRGMEKPSDHCPIWTYFD 271


>gi|315162099|gb|EFU06116.1| exodeoxyribonuclease III [Enterococcus faecalis TX0645]
          Length = 251

 Score =  189 bits (480), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 76/261 (29%), Positives = 114/261 (43%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +  N      E + D  CLQETK +      E L   + +     +
Sbjct: 1   MKCISWNVNGLRAVVKKNFMDVFNELDADFFCLQETKLQAGQIDLE-LPGYHQYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K + + +   L  +  D + R I   +                 +     
Sbjct: 60  KGYSGTAIFAKEEALSVRYGLGIEAHDQEGRVITLEYPEF-----FMVTCYTPNSQAELK 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +   +++W   F  +    L  E+P+I  GD N+  Q  D  N    + +A FT E RQ 
Sbjct: 115 RLAYRMTWEDAFRAY-LNELNQEKPVILCGDLNVAHQKIDLKNWKTNQKNAGFTPEERQK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F  L + GFTD  R  +     +YS+W Y  ++   N G RID+ ++S      L SA+I
Sbjct: 174 FTGLLDSGFTDTFRYFYPEAEGIYSWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            T   G    SDH PV V LD
Sbjct: 234 HTDILG----SDHCPVEVVLD 250


>gi|290789945|pdb|3FZI|A Chain A, 1.9 Angstrom Structure Of The Thermophilic Exonuclease Iii
           Homologue Mth0212
 gi|290789950|pdb|3G0A|A Chain A, Mth0212 With Two Bound Manganese Ions
 gi|290789955|pdb|3G1K|A Chain A, Mth0212 (Wt) Crystallized In A Monoclinic Space Group
 gi|290789956|pdb|3G1K|B Chain B, Mth0212 (Wt) Crystallized In A Monoclinic Space Group
 gi|290789957|pdb|3G2C|A Chain A, Mth0212 In Complex With A Short Ssdna (Cgta)
 gi|290789958|pdb|3G2C|B Chain B, Mth0212 In Complex With A Short Ssdna (Cgta)
 gi|290789969|pdb|3G3C|A Chain A, Mth0212 (Wt) In Complex With A 6bp Dsdna Containing A
           Single One Nucleotide Long 3'-Overhang
 gi|290789970|pdb|3G3C|B Chain B, Mth0212 (Wt) In Complex With A 6bp Dsdna Containing A
           Single One Nucleotide Long 3'-Overhang
 gi|290789976|pdb|3G3Y|A Chain A, Mth0212 In Complex With Ssdna In Space Group P32
 gi|290789977|pdb|3G3Y|B Chain B, Mth0212 In Complex With Ssdna In Space Group P32
 gi|290789979|pdb|3G4T|A Chain A, Mth0212 (Wt) In Complex With A 7bp Dsdna
 gi|290789980|pdb|3G4T|B Chain B, Mth0212 (Wt) In Complex With A 7bp Dsdna
          Length = 265

 Score =  189 bits (480), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 65/260 (25%), Positives = 106/260 (40%), Gaps = 12/260 (4%)

Query: 1   MSVVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           M+V+ + +WNVN +RA        W  E  PDI+CLQE K   +  P +      Y    
Sbjct: 1   MAVLKIISWNVNGLRAVHRKGFLKWFMEEKPDILCLQEIKAAPEQLPRKLRHVEGYRSFF 60

Query: 60  CG--QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
               +K Y+GVA+ +K  P  +      +  D + R   A F        + N+Y P+G 
Sbjct: 61  TPAERKGYSGVAMYTKVPPSSLREGFGVERFDTEGRIQIADFD----DFLLYNIYFPNGK 116

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
                    K+ +   FL   ++  +    +I  GD+N   +  D   P    N + F  
Sbjct: 117 MSEER-LKYKLEFYDAFLEDVNRERDSGRNVIICGDFNTAHREIDLARPKENSNVSGFLP 175

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
             R    K    G+ D  R  +     Y++W Y   +  +N G R+D+  ++ E    + 
Sbjct: 176 VERAWIDKFIENGYVDTFRMFNSDPGQYTWWSYRTRARERNVGWRLDYFFVNEEFKGKVK 235

Query: 238 SARIDTKPRGWTKPSDHTPV 257
            + I +   G    SDH P+
Sbjct: 236 RSWILSDVMG----SDHCPI 251


>gi|227494321|ref|ZP_03924637.1| exodeoxyribonuclease III; exonuclease III [Actinomyces coleocanis
           DSM 15436]
 gi|226832055|gb|EEH64438.1| exodeoxyribonuclease III; exonuclease III [Actinomyces coleocanis
           DSM 15436]
          Length = 255

 Score =  189 bits (480), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 73/258 (28%), Positives = 122/258 (47%), Gaps = 5/258 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + TWNVNS+R RI  +   +K  + D++ +QE K + + FPFE  +   Y +E  G  
Sbjct: 1   MRLVTWNVNSVRTRIDRVIEVLKRWDVDVLAMQELKCKPEQFPFERFEEAGYQVEMVGLN 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVAI S+     +    PG   +                + I +LY+P+G  +    
Sbjct: 61  QWNGVAIASRVGIENVQVSFPG-QPEYDGVVEARALGAVCSGVEIWSLYVPNGRELDHPH 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W+     +  +    +  +   GD+N+ P  HD ++   +E     ++  R++F
Sbjct: 120 YAYKLEWLTALRDYMVET-MHDRKVALVGDWNVAPFDHDVWDIKAFEGATHVSVPEREAF 178

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           +    +G T+  R   +    Y++WDY    + KN+G+RID +  SP  T  + +A ID 
Sbjct: 179 RAFAEIGMTEVTR---ERVDNYTYWDYQKLRFPKNEGMRIDFVYASPALTETVTAAHIDR 235

Query: 244 KPRGWTKPSDHTPVIVSL 261
             R     SDH PVIV  
Sbjct: 236 DERKGKGASDHVPVIVDF 253


>gi|225548156|ref|ZP_03769441.1| hypothetical protein RUMHYD_00135 [Blautia hydrogenotrophica DSM
           10507]
 gi|225040687|gb|EEG50933.1| hypothetical protein RUMHYD_00135 [Blautia hydrogenotrophica DSM
           10507]
          Length = 251

 Score =  189 bits (480), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 70/262 (26%), Positives = 116/262 (44%), Gaps = 13/262 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN IRA +      + +E N DI C+QETK ++      TL   + +  +  +
Sbjct: 1   MKFISWNVNGIRACLKKGFEEYFQEANADIFCIQETKCQEGQVEL-TLPGYHQYWNSAVR 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +P+ +   +  ++ D + R I   +                   ++  
Sbjct: 60  KGYSGTAIFAKREPLSVSYGIGIEEHDQEGRVITLEYEDFYFVTVYTPNSQNELARLSYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +R       +LE  +P+++ GD N+  Q  D  NP     +A FT E R  
Sbjct: 120 M------DWERDFLEYLTKLEERKPVVWCGDLNVAHQEIDLKNPKTNRKNAGFTDEERAC 173

Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F K+   GF D  R  +     +YS+W Y   +  KN G RID+ ++S      +  A+I
Sbjct: 174 FTKVLESGFIDTFRYFYPDQEGIYSWWSYRFRAREKNAGWRIDYFLVSSSLREKMVDAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
            T+  G    SDH PV + + +
Sbjct: 234 HTQVLG----SDHCPVELDITL 251


>gi|134299043|ref|YP_001112539.1| exodeoxyribonuclease III [Desulfotomaculum reducens MI-1]
 gi|134051743|gb|ABO49714.1| Exodeoxyribonuclease III [Desulfotomaculum reducens MI-1]
          Length = 264

 Score =  189 bits (480), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 91/264 (34%), Positives = 133/264 (50%), Gaps = 7/264 (2%)

Query: 4   VT--VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           +   VA++NVNSIR+R   L  W+  N PD+ICLQETK  D +FP +  +   +H    G
Sbjct: 1   MKFTVASFNVNSIRSRKELLLEWLLTNCPDVICLQETKVRDIDFPEDFFKEKGFHAIYKG 60

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           QKSYNGVAILS +    + + L       +AR + A+       + I N Y+P G  + S
Sbjct: 61  QKSYNGVAILSPHPITPLNSDLGDVAEPGEARLLAASVKG----IPIINTYIPQGQAVNS 116

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            K+  K+SWIK    + +       PL++ GD+N+ P+P D ++P        F  E   
Sbjct: 117 PKFSYKLSWIKSMRDYFNTNYLSTLPLLWMGDFNVAPEPKDVHDPKRLYGKVGFHPEEHL 176

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYY-ADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           + Q ++  GF D  R        ++FWDY       +N G RIDHI  +         A 
Sbjct: 177 ALQYVKEWGFQDVFRMHEPEAGHFTFWDYRIPKGVERNLGWRIDHIWATESLAKRSTRAW 236

Query: 241 IDTKPRGWTKPSDHTPVIVSLDIP 264
           ID +PR   KPSDHT ++   ++ 
Sbjct: 237 IDMEPRRREKPSDHTLILAEFELS 260


>gi|328541797|ref|YP_004301906.1| Exodeoxyribonuclease III [Polymorphum gilvum SL003B-26A1]
 gi|326411549|gb|ADZ68612.1| Exodeoxyribonuclease III [Polymorphum gilvum SL003B-26A1]
          Length = 269

 Score =  189 bits (480), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 85/266 (31%), Positives = 119/266 (44%), Gaps = 9/266 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62
           +T+ATWN+NS+R R+  +  +I E  PD++CLQETK  D NFP    + L Y HI   GQ
Sbjct: 5   LTIATWNINSVRLRLPIVEKFILEQAPDVLCLQETKCPDANFPEAAFRKLGYPHIAINGQ 64

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+GVA +S+     I     G      AR I      +   LR+ N Y+P G      
Sbjct: 65  KGYHGVATISRRPLANIEKR--GFCDKGDARHIAVDVAFSDSPLRVHNFYVPAGGDEPDA 122

Query: 123 KYDDKISWIKRFLRFASQRLE---LEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
             + K      F+      L     E P +  GD N+ P  HD ++          T   
Sbjct: 123 AINPKFGHKLDFMAEMKAWLNGAETERPAVLVGDLNVAPYEHDVWSHKALLKIVSHTPVE 182

Query: 180 RQS--FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLL 236
            +     +          R       LY++W Y A  W + +KG R+DH+ +SP     L
Sbjct: 183 TELLEAIRSHGGWIDAMRRFVPMEEKLYTWWSYRARDWAAADKGRRLDHVWVSPPLADRL 242

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLD 262
            + R+    RGW KPSDH PVI   +
Sbjct: 243 KAMRVLRAARGWDKPSDHAPVIAVFE 268


>gi|153937900|ref|YP_001390827.1| exodeoxyribonuclease III [Clostridium botulinum F str. Langeland]
 gi|168180137|ref|ZP_02614801.1| exodeoxyribonuclease III [Clostridium botulinum NCTC 2916]
 gi|170757676|ref|YP_001781117.1| exodeoxyribonuclease III [Clostridium botulinum B1 str. Okra]
 gi|226948816|ref|YP_002803907.1| exodeoxyribonuclease III [Clostridium botulinum A2 str. Kyoto]
 gi|152933796|gb|ABS39294.1| exodeoxyribonuclease III [Clostridium botulinum F str. Langeland]
 gi|169122888|gb|ACA46724.1| exodeoxyribonuclease III [Clostridium botulinum B1 str. Okra]
 gi|182668909|gb|EDT80885.1| exodeoxyribonuclease III [Clostridium botulinum NCTC 2916]
 gi|226843845|gb|ACO86511.1| exodeoxyribonuclease III [Clostridium botulinum A2 str. Kyoto]
 gi|295318896|gb|ADF99273.1| exodeoxyribonuclease III [Clostridium botulinum F str. 230613]
 gi|322805797|emb|CBZ03362.1| exodeoxyribonuclease III [Clostridium botulinum H04402 065]
          Length = 253

 Score =  189 bits (480), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 69/262 (26%), Positives = 114/262 (43%), Gaps = 12/262 (4%)

Query: 4   VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + +WNVN +RA    N   WI E +PDI+C+QETK +             Y+      
Sbjct: 1   MRIYSWNVNGLRAVAKKNFIEWIGEESPDILCIQETKLQGNQLEDNIKNIDGYYSYFSFA 60

Query: 62  -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GVA  +K +PI +   +  +  D + R +   F        + N+Y P+G    
Sbjct: 61  VKKGYSGVATYTKVKPISVKHSIGIEKFDSEGRILITEFK----DFTLLNIYFPNGQ-RD 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   K+ + +    +  + ++  + L+  GDYN      D  NP   E  + F    R
Sbjct: 116 EERLQYKLDFYEALFNYCDELVKEGKKLVICGDYNTAHNEIDLKNPKANEKTSGFLRIER 175

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
               K+   G+TD  R  +     YS+W Y   +  +N G RID+  +S      + +  
Sbjct: 176 DWLDKIIERGYTDTFRNMNPDKIKYSWWSYRFKARERNAGWRIDYHFVSNNLLDRVENTE 235

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I  +  G    SDH PV++ L 
Sbjct: 236 ILNEVYG----SDHCPVMLELK 253


>gi|85858539|ref|YP_460741.1| exodeoxyribonuclease III [Syntrophus aciditrophicus SB]
 gi|85721630|gb|ABC76573.1| exodeoxyribonuclease III [Syntrophus aciditrophicus SB]
          Length = 267

 Score =  189 bits (480), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 89/265 (33%), Positives = 135/265 (50%), Gaps = 5/265 (1%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           M+   +AT+NVNSIR+R+H + +W++EN PD+ C+QETK  D  FP +      YH+   
Sbjct: 6   MARFKIATYNVNSIRSRLHIILSWLEENRPDVFCMQETKVADARFPADAFTVAGYHVVFR 65

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           G K YNGVAI S  +P  +   L G+  D     +          + + N Y+P G    
Sbjct: 66  GMKQYNGVAIASLEKPENVTYGLGGEADDADEDRLI---AAVYSGVPVINTYVPQGRNRE 122

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
           + ++  K+ W  RF  +  Q+   + PL++ GD N+ P+  D ++P       CF  EV 
Sbjct: 123 NPQFAYKLQWYARFREYLVQKWSSDAPLVWCGDLNVAPEQIDVHDPKRLLGHVCFNPEVW 182

Query: 181 QSFQKLQNMGFTDAIRATHDTH-HLYSFWDYY-ADSWSKNKGIRIDHIMLSPEATSLLHS 238
            +F ++++ G  D  R  H      Y+F+DY    S  +  G RIDHI+ +P   +   S
Sbjct: 183 DAFDRVKSWGLEDLFRKHHPGEVECYTFFDYRVPRSVERKLGWRIDHILSTPALAAHCDS 242

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263
             ID  PR   KPSDHT ++    I
Sbjct: 243 CNIDMNPRMAEKPSDHTILVAEFTI 267


>gi|229549148|ref|ZP_04437873.1| exodeoxyribonuclease [Enterococcus faecalis ATCC 29200]
 gi|256957962|ref|ZP_05562133.1| exonuclease III [Enterococcus faecalis DS5]
 gi|257084299|ref|ZP_05578660.1| exonuclease III [Enterococcus faecalis Fly1]
 gi|257090921|ref|ZP_05585282.1| exonuclease III [Enterococcus faecalis CH188]
 gi|307276972|ref|ZP_07558082.1| exodeoxyribonuclease III [Enterococcus faecalis TX2134]
 gi|312902560|ref|ZP_07761766.1| exodeoxyribonuclease III [Enterococcus faecalis TX0635]
 gi|312951910|ref|ZP_07770798.1| exodeoxyribonuclease III [Enterococcus faecalis TX0102]
 gi|229305702|gb|EEN71698.1| exodeoxyribonuclease [Enterococcus faecalis ATCC 29200]
 gi|256948458|gb|EEU65090.1| exonuclease III [Enterococcus faecalis DS5]
 gi|256992329|gb|EEU79631.1| exonuclease III [Enterococcus faecalis Fly1]
 gi|256999733|gb|EEU86253.1| exonuclease III [Enterococcus faecalis CH188]
 gi|306506395|gb|EFM75555.1| exodeoxyribonuclease III [Enterococcus faecalis TX2134]
 gi|310630099|gb|EFQ13382.1| exodeoxyribonuclease III [Enterococcus faecalis TX0102]
 gi|310634230|gb|EFQ17513.1| exodeoxyribonuclease III [Enterococcus faecalis TX0635]
 gi|315035107|gb|EFT47039.1| exodeoxyribonuclease III [Enterococcus faecalis TX0027]
 gi|315154300|gb|EFT98316.1| exodeoxyribonuclease III [Enterococcus faecalis TX0031]
 gi|315159607|gb|EFU03624.1| exodeoxyribonuclease III [Enterococcus faecalis TX0312]
 gi|315579630|gb|EFU91821.1| exodeoxyribonuclease III [Enterococcus faecalis TX0630]
 gi|323481658|gb|ADX81097.1| exodeoxyribonuclease III [Enterococcus faecalis 62]
          Length = 251

 Score =  189 bits (480), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 76/261 (29%), Positives = 115/261 (44%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +  N      E + D  CLQETK +      E L   + +     +
Sbjct: 1   MKCISWNVNGLRAVVKKNFMDVFNELDADFFCLQETKLQAGQIDLE-LPGYHQYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K + + +   L  +  D + R I   +                 +     
Sbjct: 60  KGYSGTAIFAKEEALSVRYGLGIEAHDQEGRVITLEYPEF-----FMVTCYTPNSQAELK 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +   +++W   F  +    L  E+P+I  GD N+  Q  D  N    + +A FT E RQ 
Sbjct: 115 RLAYRMTWEDAFRAY-LNELNQEKPVILCGDLNVAHQNIDLKNWKTNQKNAGFTPEERQK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L + GFTD  R  +     +YS+W Y  ++   N G RID+ ++S      L SA+I
Sbjct: 174 FTELLDSGFTDTFRYFYPEAEGIYSWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            T   G    SDH PV V LD
Sbjct: 234 HTDILG----SDHCPVEVVLD 250


>gi|315148697|gb|EFT92713.1| exodeoxyribonuclease III [Enterococcus faecalis TX4244]
          Length = 251

 Score =  189 bits (479), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 76/261 (29%), Positives = 115/261 (44%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +  N      E + D  CLQETK +      E L   + +     +
Sbjct: 1   MKCISWNVNGLRAVVKKNFMDVFNELDADFFCLQETKLQAGQIDLE-LPGYHQYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K + + +   L  +  D + R I   +                 +     
Sbjct: 60  KGYSGTAIFAKEEALSVRYGLGIESHDQEGRVITLEYPEF-----FMVTCYTPNSQAELK 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +   +++W   F  +    L  E+P+I  GD N+  Q  D  N    + +A FT E RQ 
Sbjct: 115 RLAYRMTWEDAFRAY-LNELNQEKPVILCGDLNVAHQKIDLKNWKTNQKNAGFTPEERQK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L + GFTD  R  +     +YS+W Y  ++   N G RID+ ++S      L SA+I
Sbjct: 174 FTELLDSGFTDTFRYFYPEAEGIYSWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            T   G    SDH PV V LD
Sbjct: 234 HTDILG----SDHCPVEVVLD 250


>gi|326390442|ref|ZP_08212000.1| exodeoxyribonuclease III Xth [Thermoanaerobacter ethanolicus JW
           200]
 gi|325993560|gb|EGD51994.1| exodeoxyribonuclease III Xth [Thermoanaerobacter ethanolicus JW
           200]
          Length = 257

 Score =  189 bits (479), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 70/263 (26%), Positives = 113/263 (42%), Gaps = 14/263 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           +   +WNVN +RA +      + K+ N DI C+QETK +      E L    Y+      
Sbjct: 1   MKFVSWNVNGLRACLQKGFMDYFKKVNADIFCIQETKLQPHQTGLEELNLEGYYAFWNFA 60

Query: 62  -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K+Y+G A+ +KY+P+ +   +     D + R I   +       +   +     N   
Sbjct: 61  EKKAYSGTAVFTKYKPLSVNYGIGIPQHDNEGRVITLEYE------KFYLVNTYTPNSQR 114

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
                      +   R    +L+  +P+I  GD N+  +  D  NP     +A FT E R
Sbjct: 115 GLTRLSYRMEWEEDFRNYLLKLDSVKPIILCGDLNVAHKEIDIKNPSANRRNAGFTDEER 174

Query: 181 QSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           +    L N GF D  R  +      Y++W Y  ++  KN G RID+ ++S      L  A
Sbjct: 175 EKMTMLLNSGFIDTFRYFYPHKKDAYTWWSYMRNAREKNIGWRIDYFIVSQRLKDYLIDA 234

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
            I +   G    SDH PV++ +D
Sbjct: 235 EIHSDVMG----SDHCPVVLEID 253


>gi|229544881|ref|ZP_04433606.1| exodeoxyribonuclease [Enterococcus faecalis TX1322]
 gi|256963841|ref|ZP_05568012.1| exonuclease III [Enterococcus faecalis HIP11704]
 gi|257081702|ref|ZP_05576063.1| exonuclease III [Enterococcus faecalis E1Sol]
 gi|257087702|ref|ZP_05582063.1| exonuclease III [Enterococcus faecalis D6]
 gi|257416904|ref|ZP_05593898.1| exonuclease III [Enterococcus faecalis AR01/DG]
 gi|257421653|ref|ZP_05598643.1| exodeoxyribonuclease [Enterococcus faecalis X98]
 gi|307271787|ref|ZP_07553058.1| exodeoxyribonuclease III [Enterococcus faecalis TX0855]
 gi|307278718|ref|ZP_07559785.1| exodeoxyribonuclease III [Enterococcus faecalis TX0860]
 gi|307288645|ref|ZP_07568626.1| exodeoxyribonuclease III [Enterococcus faecalis TX0109]
 gi|229309982|gb|EEN75969.1| exodeoxyribonuclease [Enterococcus faecalis TX1322]
 gi|256954337|gb|EEU70969.1| exonuclease III [Enterococcus faecalis HIP11704]
 gi|256989732|gb|EEU77034.1| exonuclease III [Enterococcus faecalis E1Sol]
 gi|256995732|gb|EEU83034.1| exonuclease III [Enterococcus faecalis D6]
 gi|257158732|gb|EEU88692.1| exonuclease III [Enterococcus faecalis ARO1/DG]
 gi|257163477|gb|EEU93437.1| exodeoxyribonuclease [Enterococcus faecalis X98]
 gi|295113675|emb|CBL32312.1| exodeoxyribonuclease III [Enterococcus sp. 7L76]
 gi|306500399|gb|EFM69735.1| exodeoxyribonuclease III [Enterococcus faecalis TX0109]
 gi|306504579|gb|EFM73782.1| exodeoxyribonuclease III [Enterococcus faecalis TX0860]
 gi|306511665|gb|EFM80664.1| exodeoxyribonuclease III [Enterococcus faecalis TX0855]
 gi|315025498|gb|EFT37430.1| exodeoxyribonuclease III [Enterococcus faecalis TX2137]
 gi|315032586|gb|EFT44518.1| exodeoxyribonuclease III [Enterococcus faecalis TX0017]
 gi|315143871|gb|EFT87887.1| exodeoxyribonuclease III [Enterococcus faecalis TX2141]
 gi|315155597|gb|EFT99613.1| exodeoxyribonuclease III [Enterococcus faecalis TX0043]
 gi|315165304|gb|EFU09321.1| exodeoxyribonuclease III [Enterococcus faecalis TX1302]
 gi|315168718|gb|EFU12735.1| exodeoxyribonuclease III [Enterococcus faecalis TX1341]
 gi|327535952|gb|AEA94786.1| exodeoxyribonuclease III [Enterococcus faecalis OG1RF]
          Length = 251

 Score =  189 bits (479), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 76/261 (29%), Positives = 115/261 (44%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +  N      E + D  CLQETK +      E L   + +     +
Sbjct: 1   MKCISWNVNGLRAVVKKNFMDVFNELDADFFCLQETKLQAGQIDLE-LPGYHQYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K + + +   L  +  D + R I   +                 +     
Sbjct: 60  KGYSGTAIFAKEEALSVRYGLGIEAHDQEGRVITLEYPEF-----FMVTCYTPNSQAELK 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +   +++W   F  +    L  E+P+I  GD N+  Q  D  N    + +A FT E RQ 
Sbjct: 115 RLAYRMTWEDAFRAY-LNELNQEKPVILCGDLNVAHQKIDLKNWKTNQKNAGFTPEERQK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L + GFTD  R  +     +YS+W Y  ++   N G RID+ ++S      L SA+I
Sbjct: 174 FTELLDSGFTDTFRYFYPEAEGIYSWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            T   G    SDH PV V LD
Sbjct: 234 HTDILG----SDHCPVEVVLD 250


>gi|58040181|ref|YP_192145.1| exodeoxyribonuclease III [Gluconobacter oxydans 621H]
 gi|58002595|gb|AAW61489.1| Exodeoxyribonuclease III [Gluconobacter oxydans 621H]
          Length = 275

 Score =  189 bits (479), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 96/257 (37%), Positives = 134/257 (52%), Gaps = 7/257 (2%)

Query: 5   TVATWNVNSIRARIHNLAAWIKEN-NPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           T A+WN+NSIRAR H++  W++ +   D++CLQE K ED  FP          +   GQK
Sbjct: 24  TFASWNINSIRARAHHVQDWLERHPECDLLCLQEIKCEDSQFP-AVFAEAGLDVAISGQK 82

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVA++ +         LP  D                  + IGNLYLP+GN      
Sbjct: 83  AYNGVALIGRRPFTVTHHTLPAFDHPSARYIEAELDG-----ITIGNLYLPNGNSGGEDG 137

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+++       A   L+ E+P  F GD+N+ P   D     +  +DA    E R +F
Sbjct: 138 YATKLAFFDALAARARVLLDAEKPFAFIGDFNVCPTDEDLAPGALSTDDALVRPETRAAF 197

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           ++L+ MG TDA+RA   T   Y+FWDY A ++ +N G+RIDH +LSP  T  L S  ID 
Sbjct: 198 RRLEWMGLTDALRALQPTGRHYTFWDYQAAAFQRNSGLRIDHALLSPRLTERLKSFVIDR 257

Query: 244 KPRGWTKPSDHTPVIVS 260
             R   K SDH PV+V+
Sbjct: 258 DERAKEKASDHVPVLVT 274


>gi|15892951|ref|NP_360665.1| exodeoxyribonuclease III [Rickettsia conorii str. Malish 7]
 gi|15620145|gb|AAL03566.1| exodeoxyribonuclease III [Rickettsia conorii str. Malish 7]
          Length = 260

 Score =  189 bits (479), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 97/259 (37%), Positives = 143/259 (55%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+NSI+ R++ L  ++ + NPDI+ LQE K E   FPF+ L  L Y+    GQK
Sbjct: 1   MKIATWNINSIKTRLNLLRNFLSKENPDILLLQEIKCETAKFPFDALSDLPYNSYVHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           SYNGVAI+SK+   EI+   P +    QARF+E   ++      I +LY P+G  + S K
Sbjct: 61  SYNGVAIISKFPADEIIKDFPNNYCSDQARFLEIKLSLPIGFCNIISLYAPNGAFVGSDK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+++   F+ + S +   +E  I  GD+NI P   D Y+P +     CFT   ++  
Sbjct: 121 FVAKLAFYDNFINYLSTKKSFDEKTIIGGDFNIAPFDIDVYSPKLLAETTCFTEVEQKKL 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + + N GF D  R  H +   +S+WDY A  + +NKG+RID I+        L +  +D 
Sbjct: 181 RTILNSGFEDLYRLMHPSKQEFSWWDYRAGCFEQNKGMRIDMILGCNNTIDYLENCYMDY 240

Query: 244 KPRGWTKPSDHTPVIVSLD 262
             R   KPSDH PVI S  
Sbjct: 241 NLRTQEKPSDHIPVIASFK 259


>gi|91974922|ref|YP_567581.1| exodeoxyribonuclease III [Rhodopseudomonas palustris BisB5]
 gi|91681378|gb|ABE37680.1| exodeoxyribonuclease III [Rhodopseudomonas palustris BisB5]
          Length = 352

 Score =  189 bits (479), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 82/270 (30%), Positives = 133/270 (49%), Gaps = 10/270 (3%)

Query: 4   VT--VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETC 60
           +   + TWN+NS+R RI  +AA++KE  PD++CLQETK  D  FP +  + L Y HI   
Sbjct: 83  MRFTLTTWNINSVRLRIDLVAAFLKEQQPDVLCLQETKCPDDAFPLKRFKQLGYEHIALN 142

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG---- 116
           GQK Y+GVA++SK   +     +  D+LD +   +      N   L + N Y+P G    
Sbjct: 143 GQKGYHGVAVISKIPFVARDIRIFCDNLDSRHISVSLGTGDNDPPLVLHNFYVPAGGDVA 202

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
           +P  + K+  K+S++             +   I  GD N+ P  HD ++          T
Sbjct: 203 DPELNPKFKHKLSFLDEMKACEPLHPSGDARHILVGDLNVAPHEHDVWSHKQLLKVVSHT 262

Query: 177 L-EVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWS-KNKGIRIDHIMLSPEAT 233
             E  +    L+   + D  R     +  +Y++W Y A  W+  ++G R+DHI +S    
Sbjct: 263 PVECEKLLAVLRAGNWVDVARDRIPLSEKIYTWWSYRAADWTVGDRGRRLDHIWVSEALR 322

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           + +   +I    R W +PSDH PV V++++
Sbjct: 323 TRVTDFKILRDARSWERPSDHVPVTVTMEL 352


>gi|210617713|ref|ZP_03291707.1| hypothetical protein CLONEX_03931 [Clostridium nexile DSM 1787]
 gi|210149155|gb|EEA80164.1| hypothetical protein CLONEX_03931 [Clostridium nexile DSM 1787]
          Length = 250

 Score =  189 bits (479), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 69/261 (26%), Positives = 114/261 (43%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN IRA +      + +E + DI C+QE+K +      E L+  + +     +
Sbjct: 1   MKLISWNVNGIRACVQKGFLEFFQEADADIFCIQESKMQAGQLDLE-LEGYHQYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G A+ +K +P+ +   +  ++ D + R I   F                   ++  
Sbjct: 60  KGYSGTAVFTKKEPLSVQYGIGIEEHDKEGRVITLEFEEFYFVTVYTPNSQSELARLSYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
              +             + LE ++P+IFAGD N+     D  NP     +A FT E R  
Sbjct: 120 IQWETDFLAY------LKGLEQKKPVIFAGDLNVAYAEIDLKNPKTNRKNAGFTDEERAK 173

Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F ++   GF D  R  +     +YS+W Y   + +KN G RID+  +S      L  A+I
Sbjct: 174 FGEVLKAGFIDTFRYFYPEMEGIYSWWSYRFSARAKNAGWRIDYFCVSESLKDRLADAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            T   G    SDH P+ + L 
Sbjct: 234 LTDVMG----SDHCPIELDLK 250


>gi|229587031|ref|YP_002845532.1| Exodeoxyribonuclease III [Rickettsia africae ESF-5]
 gi|228022081|gb|ACP53789.1| Exodeoxyribonuclease III [Rickettsia africae ESF-5]
          Length = 260

 Score =  189 bits (479), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 96/259 (37%), Positives = 144/259 (55%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+NSI+ R++ L  ++ + NPDI+ LQE K E   FPF+ L  L Y+    GQK
Sbjct: 1   MKIATWNINSIKTRLNLLRNFLSKENPDILLLQEIKCETAKFPFDALSDLPYNSYVHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           SYNGVAI+SK+   EI+   P +    QARF+E   ++      I +LY P+G+ + S K
Sbjct: 61  SYNGVAIISKFPADEIIKDFPNNYCSDQARFLEIKLSLPIGFCNIISLYAPNGSFVGSDK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+++   F+ + S +   +E  I  GD+NI P   D Y+P +     CFT   ++  
Sbjct: 121 FVAKLAFYDNFINYLSTKKSFDEKTIIGGDFNIAPFDIDVYSPKLLTETTCFTEVEQKKL 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + + N GF D  R  H +   +S+WDY A  + +NKG+RID ++        L +  +D 
Sbjct: 181 RTILNSGFEDLYRLMHPSKQEFSWWDYRAGCFEQNKGMRIDMVLGCNNTIDYLENCYMDY 240

Query: 244 KPRGWTKPSDHTPVIVSLD 262
             R   KPSDH PVI S  
Sbjct: 241 NLRTQEKPSDHIPVIASFK 259


>gi|290789984|pdb|3G91|A Chain A, 1.2 Angstrom Structure Of The Exonuclease Iii Homologue
           Mth0212
          Length = 265

 Score =  189 bits (479), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 65/260 (25%), Positives = 106/260 (40%), Gaps = 12/260 (4%)

Query: 1   MSVVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           M+V+ + +WNVN +RA        W  E  PDI+CLQE K   +  P +      Y    
Sbjct: 1   MAVLKIISWNVNGLRAVHRKGFLKWFMEEKPDILCLQEIKAAPEQLPRKLRHVEGYRSFF 60

Query: 60  CG--QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
               +K Y+GVA+ +K  P  +      +  D + R   A F        + N+Y P+G 
Sbjct: 61  TPAERKGYSGVAMYTKVPPSSLREGFGVERFDTEGRIQIADFD----DFLLYNIYFPNGA 116

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
                    K+ +   FL   ++  +    +I  GD+N   +  D   P    N + F  
Sbjct: 117 MSEER-LKYKLEFYDAFLEDVNRERDSGRNVIICGDFNTAHREIDLARPKENSNVSGFLP 175

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
             R    K    G+ D  R  +     Y++W Y   +  +N G R+D+  ++ E    + 
Sbjct: 176 VERAWIDKFIENGYVDTFRMFNSDPGQYTWWSYRTRARERNVGWRLDYFFVNEEFKGKVK 235

Query: 238 SARIDTKPRGWTKPSDHTPV 257
            + I +   G    SDH P+
Sbjct: 236 RSWILSDVMG----SDHCPI 251


>gi|73666996|ref|YP_303012.1| exodeoxyribonuclease III [Ehrlichia canis str. Jake]
 gi|72394137|gb|AAZ68414.1| Exodeoxyribonuclease III [Ehrlichia canis str. Jake]
          Length = 279

 Score =  189 bits (479), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 97/277 (35%), Positives = 151/277 (54%), Gaps = 17/277 (6%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
            + +ATWNVNSIR R+ +L  W+ + + DI  LQE K  +  FPF  L+SL Y     GQ
Sbjct: 2   TLKIATWNVNSIRKRLDHLRHWLVKYDIDIALLQEIKCTNDQFPFLDLESLGYKCYVNGQ 61

Query: 63  KSYNGVAILSKYQPI-----------------EIVTHLPGDDLDVQARFIEATFTINTQT 105
           K+ NGVAI++KY  +                   ++         ++R++E     N   
Sbjct: 62  KARNGVAIITKYPIVEELVTDIFSSDYKSSLCYKLSSEGFIYNYQESRYLECVVLYNEVK 121

Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165
           +R+ ++Y+P+G  + S  +  K+ +  + +  A   L  EE LI  GDYN+ P P D Y+
Sbjct: 122 VRVASIYIPNGQSVDSDAFQYKLGFFDQLIDRALFLLNKEEILILGGDYNVAPYPIDVYS 181

Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225
             I +   CF    R+ F+ + N+GFTDA R  ++    +S+W+Y A +W +N+G+RID+
Sbjct: 182 TEIMDGRLCFHQYEREKFRVILNLGFTDAFRVLNEHDQKFSWWNYKAGAWQENRGLRIDN 241

Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
           ++LSP+A   L S  I  + RG   PSDH PVI +L+
Sbjct: 242 LLLSPQAVDKLLSCVIHDELRGLDTPSDHAPVICTLE 278


>gi|288799645|ref|ZP_06405104.1| exodeoxyribonuclease III [Prevotella sp. oral taxon 299 str. F0039]
 gi|288332893|gb|EFC71372.1| exodeoxyribonuclease III [Prevotella sp. oral taxon 299 str. F0039]
          Length = 250

 Score =  189 bits (479), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 68/259 (26%), Positives = 106/259 (40%), Gaps = 12/259 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +        K  + D  CLQETK +      +  +    +     +
Sbjct: 1   MKFISWNVNGLRASVTKGFEDIFKTLDADFFCLQETKMQAGQLDLQ-FEGYESYWNYADK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K+ P+ +   +  D  D + R +   F                   +   
Sbjct: 60  KGYSGTAIYTKHSPLSVQYGIGIDQHDHEGRVVTLEFEQFYLVTVYTPNSQDELKRLDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +R  +    +L+  +P++  GD N+  Q  D  NP     +A FT E R+ 
Sbjct: 120 M------EWERDFQAYLVKLDASKPVVVCGDMNVAHQEIDLKNPKTNRRNAGFTDEEREK 173

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
              L + GF D  R  +     YS+W Y   +  KN G RID+ ++S    S L  A+I 
Sbjct: 174 MTNLLDNGFIDTFRYLYPEEVTYSWWSYRFKAREKNTGWRIDYFLISERLKSNLTDAKIH 233

Query: 243 TKPRGWTKPSDHTPVIVSL 261
           T   G    SDH PV + L
Sbjct: 234 TDIFG----SDHCPVELDL 248


>gi|29377212|ref|NP_816366.1| exodeoxyribonuclease [Enterococcus faecalis V583]
 gi|227554220|ref|ZP_03984267.1| exodeoxyribonuclease [Enterococcus faecalis HH22]
 gi|29344678|gb|AAO82436.1| exodeoxyribonuclease [Enterococcus faecalis V583]
 gi|227176667|gb|EEI57639.1| exodeoxyribonuclease [Enterococcus faecalis HH22]
 gi|315573773|gb|EFU85964.1| exodeoxyribonuclease III [Enterococcus faecalis TX0309B]
 gi|315580287|gb|EFU92478.1| exodeoxyribonuclease III [Enterococcus faecalis TX0309A]
          Length = 251

 Score =  189 bits (479), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 76/261 (29%), Positives = 115/261 (44%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +  N      E + D  CLQETK +      E L   + +     +
Sbjct: 1   MKCISWNVNGLRAVVKKNFMDVFNELDADFFCLQETKLQAGQIDLE-LPGYHQYWSYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K + + +   L  +  D + R I   +                 +     
Sbjct: 60  KGYSGTAIFAKEEALSVRYGLGIEAHDQEGRVITLEYPEF-----FMVTCYTPNSQAELK 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +   +++W   F  +    L  E+P+I  GD N+  Q  D  N    + +A FT E RQ 
Sbjct: 115 RLAYRMTWEDAFRAY-LNELNQEKPVILCGDLNVAHQNIDLKNWKTNQKNAGFTPEERQK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L + GFTD  R  +     +YS+W Y  ++   N G RID+ ++S      L SA+I
Sbjct: 174 FTELLDSGFTDTFRYFYPEAEGIYSWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            T   G    SDH PV V LD
Sbjct: 234 HTDILG----SDHCPVEVVLD 250


>gi|315174931|gb|EFU18948.1| exodeoxyribonuclease III [Enterococcus faecalis TX1346]
          Length = 251

 Score =  189 bits (479), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 76/261 (29%), Positives = 116/261 (44%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +  N      E + D  CLQETK +      E L   + +     +
Sbjct: 1   MKCISWNVNGLRAVVKKNFMDVFNELDADFFCLQETKLQAGQIDLE-LPGYHQYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI++K + + +   L  +  D + R I   +                 +     
Sbjct: 60  KGYSGTAIVAKEEALSVRYGLGIEAHDQEGRVITLEYPEF-----FMVTCYTPNSQAELK 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +   +++W   F  +    L  E+P+I  GD N+  Q  D  N    + +A FT E RQ 
Sbjct: 115 RLAYRMTWEDAFRAY-LNELNQEKPVILCGDLNVAHQKIDLKNWKTNQKNAGFTPEERQK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L + GFTD  R  +     +YS+W Y  ++   N G RID+ ++S      L SA+I
Sbjct: 174 FTELLDSGFTDTFRYFYPEAEGIYSWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            T   G    SDH PV V LD
Sbjct: 234 HTDILG----SDHCPVEVVLD 250


>gi|39936370|ref|NP_948646.1| putative exonuclease III [Rhodopseudomonas palustris CGA009]
 gi|39650225|emb|CAE28748.1| putative exonuclease III [Rhodopseudomonas palustris CGA009]
          Length = 260

 Score =  189 bits (479), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 91/259 (35%), Positives = 141/259 (54%), Gaps = 3/259 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           V +AT+NVN++  R+  L AW+K   PDI+CLQE K  + +FP   L+   Y     GQK
Sbjct: 5   VKIATFNVNNVNKRLPILLAWLKTARPDIVCLQELKAAEADFPEAALRKAGYAAAWVGQK 64

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           S+NGVA+L++ + I +           +              + +G LY P+GNP    K
Sbjct: 65  SWNGVAVLARRREIVVTRRRLPGAPHDKQS---RYIEAAVAGIIVGCLYAPNGNPQPGPK 121

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +DDK++W+KR  R A+  L+   P++ AGD+N++P P D Y    W+ DA      R+ F
Sbjct: 122 FDDKLAWLKRLNRHAATLLKSGAPVVLAGDFNVVPTPADIYPGKSWDKDALVQPAPRKLF 181

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             L   G+TDA+R  H     Y+FW Y+ + + ++ G+RIDH++L P   + L  A +D 
Sbjct: 182 AALLRQGWTDALRHCHPEDAPYTFWSYWRNRFERDAGLRIDHLLLDPSLAARLKRAGVDR 241

Query: 244 KPRGWTKPSDHTPVIVSLD 262
           K R   + SDH P  + ++
Sbjct: 242 KVREAPEASDHAPAWIVIE 260


>gi|228471546|ref|ZP_04056321.1| exodeoxyribonuclease III [Capnocytophaga gingivalis ATCC 33624]
 gi|228277122|gb|EEK15802.1| exodeoxyribonuclease III [Capnocytophaga gingivalis ATCC 33624]
          Length = 253

 Score =  189 bits (479), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 81/262 (30%), Positives = 130/262 (49%), Gaps = 14/262 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY---HIET 59
           + + ++NVN IRA +      W+K  +PD+ICLQE K  +       L+ + Y   +  +
Sbjct: 1   MKIFSYNVNGIRAAMSKGFTQWLKAADPDVICLQEIKALESQIDLPALEEIGYTYHYFHS 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GVAILSK  P ++      D +D + R + A +      L I +LYLP G  I
Sbjct: 61  AEKKGYSGVAILSKTAPTQVEVGAGIDYMDREGRILRADYG----DLSIMSLYLPSGTNI 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                D K+ ++  F  + ++  +    LI  GDYNI  +  D ++P+   N + F    
Sbjct: 117 DR--LDHKLQFMADFQNYINELKKTHPNLIICGDYNICHEAIDIHDPVRNANVSGFLPVE 174

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R+        GF D+ R  H   H YS+W Y A++ + NKG RID+ +++    + L  A
Sbjct: 175 RKWLDDFLKSGFIDSFRFFHKEPHNYSWWSYRANARANNKGWRIDYCLVAQPLENRLLRA 234

Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261
            I  +     K SDH P++V +
Sbjct: 235 AILPEA----KHSDHCPILVEI 252


>gi|257470580|ref|ZP_05634670.1| exodeoxyribonuclease III Xth [Fusobacterium ulcerans ATCC 49185]
 gi|317064786|ref|ZP_07929271.1| exodeoxyribonuclease III Xth [Fusobacterium ulcerans ATCC 49185]
 gi|313690462|gb|EFS27297.1| exodeoxyribonuclease III Xth [Fusobacterium ulcerans ATCC 49185]
          Length = 253

 Score =  189 bits (479), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 70/261 (26%), Positives = 115/261 (44%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      + K  N DI C+QETK ++     E L+  + +     +
Sbjct: 1   MKLISWNVNGLRAAVQKGFLDYFKNENADIFCVQETKLQEGQIELE-LEGYHQYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +PIE+   L  ++ D + R I   +                   ++  
Sbjct: 60  KGYSGTAIFTKKKPIEVSYGLGIEEHDKEGRVITLEYDDFYMITVYTPNSQEELARLSYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +   R    +L+  +P+I  GD N+  Q  D  NP     +A F+ E R  
Sbjct: 120 M------SWEDEFRNYVMKLDKLKPVIICGDLNVAHQEIDLKNPKSNRKNAGFSDEERAK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L   GF D+ R  +      YS+W Y  ++   N G RID+ ++S     ++  A I
Sbjct: 174 FTELLKNGFVDSFRHFYPELTGAYSWWSYRFNARKNNAGWRIDYFVVSERLKDIMEGAEI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
             +  G    SDH PV++ L 
Sbjct: 234 HNETLG----SDHCPVVLKLK 250


>gi|197303592|ref|ZP_03168630.1| hypothetical protein RUMLAC_02320 [Ruminococcus lactaris ATCC
           29176]
 gi|197297326|gb|EDY31888.1| hypothetical protein RUMLAC_02320 [Ruminococcus lactaris ATCC
           29176]
          Length = 250

 Score =  189 bits (479), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 71/261 (27%), Positives = 116/261 (44%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN IRA +      +  E + DI C+QETK ++     E L+  + +     +
Sbjct: 1   MKLISWNVNGIRACVQKGFLDFFHEADADIFCIQETKMQEGQLNLE-LERYHQYWNYAVK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G A+ +K +P+ +   L  ++ D + R I   F                   +   
Sbjct: 60  KGYSGTAVFTKKEPLSVSYGLGIEEHDQEGRVITCEFEDFYFVTVYTPNSQSELARLDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +   R   ++LE ++P+I  GD N+  +  D  NP     +A FT E R  
Sbjct: 120 M------KWEDDFRAYLKKLEKKKPVIVTGDLNVAHKEIDLKNPKTNRKNAGFTDEERGK 173

Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L + GF D  R  +     +YS+W Y   + +KN G RID+  +S      L  A+I
Sbjct: 174 FTELLDAGFIDTFRYFYPDQEGIYSWWSYRFSARAKNAGWRIDYFCVSECLKDRLADAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            T+  G    SDH P+ + L 
Sbjct: 234 LTEVMG----SDHCPIELDLK 250


>gi|90021640|ref|YP_527467.1| exonuclease III [Saccharophagus degradans 2-40]
 gi|89951240|gb|ABD81255.1| Exodeoxyribonuclease III [Saccharophagus degradans 2-40]
          Length = 272

 Score =  189 bits (479), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 79/272 (29%), Positives = 125/272 (45%), Gaps = 12/272 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N NSIR R+H L A I ++ PD I +QETK  D +FP E +Q++ YH+E  GQK
Sbjct: 1   MKCISFNTNSIRIRLHQLEAVIAKHQPDFIGIQETKVSDPDFPVEAIQAMGYHVEFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-TQTLRIGNLYLPHGNPITST 122
           ++ GVA++SK+   ++      D  + Q RFI   FT+   + + + N Y P G      
Sbjct: 61  THYGVALMSKHPFNKVQKGYVTDTEESQKRFILGEFTLPSGKQITVINGYFPQGENRDHP 120

Query: 123 K-YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175
             + +K+ +            +  + L+  GD NI                 + +    F
Sbjct: 121 IKFPNKLKYYADLQAHIEASYKPSDLLVVMGDMNISHTDLDIGIGESNRKRWLKDGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT--HHLYSFWDYYADSWSK--NKGIRIDHIMLSPE 231
             E R+   KL   G  D  R T+       YS++DY +  + +   +G+RID I+ S  
Sbjct: 181 LPEEREWLDKLLGWGLVDTYRQTNPNLEEEQYSWFDYRSKGFEREPKRGLRIDLILASTA 240

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                 ++ ID   RG  K SDH P+     I
Sbjct: 241 LAQHSVASGIDYDIRGMEKASDHCPIWTEFSI 272


>gi|329769257|ref|ZP_08260674.1| exodeoxyribonuclease [Gemella sanguinis M325]
 gi|328839251|gb|EGF88834.1| exodeoxyribonuclease [Gemella sanguinis M325]
          Length = 254

 Score =  189 bits (479), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 70/261 (26%), Positives = 113/261 (43%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   ++NVN +RA +  N     K+ + D  CLQETK +      +       +     +
Sbjct: 1   MKCISFNVNGLRAIVGKNFEEDFKKLDADFFCLQETKMQAGQLDLQ-FDGYYSYFNYAER 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +KY+P+ +   +  ++ D + R I   +        I       G+ +   
Sbjct: 60  KGYSGTAIYTKYKPLNVTYGIGIEEHDTEGRVITLEY---DNFFFITVYTPNSGSELKRL 116

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +Y       +   +     L  ++ +I  GD N+     D  NP     +A FT E R+ 
Sbjct: 117 EYR---MSWEDDFKDYLLTLNKDKGVIVCGDLNVAHTEIDLKNPKTNVKNAGFTPEEREK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F KL + GF D  R  +      YS+W Y  ++   N G RID+ ++S +    L SA+I
Sbjct: 174 FTKLLDAGFIDTFRYFNPDLTGAYSWWSYRFNARKNNSGWRIDYFLVSKDLKKYLVSAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
                G    SDH PV + LD
Sbjct: 234 HNDIFG----SDHCPVELVLD 250


>gi|312900096|ref|ZP_07759412.1| exodeoxyribonuclease III [Enterococcus faecalis TX0470]
 gi|311292731|gb|EFQ71287.1| exodeoxyribonuclease III [Enterococcus faecalis TX0470]
          Length = 251

 Score =  189 bits (479), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 76/261 (29%), Positives = 114/261 (43%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA    N      E + D  CLQETK +      E L   + +     +
Sbjct: 1   MKCISWNVNGLRAVFKKNFMDVFNELDADFFCLQETKLQAGQIDLE-LPGYHQYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K + + +   L  +  D + R I   +                 +     
Sbjct: 60  KGYSGTAIFAKEEALSVRYGLGIEAHDQEGRVITLEYPEF-----FMVTCYTPNSQAELK 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +   +++W   F  +    L  E+P+I  GD N+  Q  D  N    + +A FT E RQ 
Sbjct: 115 RLAYRMTWEDAFRAY-LNELNQEKPVILCGDLNVAHQKIDLKNWKTNQKNAGFTPEERQK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L + GFTD  R  +     +YS+W Y  ++   N G RID+ ++S      L SA+I
Sbjct: 174 FTELLDSGFTDTFRYFYPEAEGIYSWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            T   G    SDH PV V LD
Sbjct: 234 HTDILG----SDHCPVEVVLD 250


>gi|256961018|ref|ZP_05565189.1| exonuclease III [Enterococcus faecalis Merz96]
 gi|293384592|ref|ZP_06630458.1| exodeoxyribonuclease III [Enterococcus faecalis R712]
 gi|293386821|ref|ZP_06631392.1| exodeoxyribonuclease III [Enterococcus faecalis S613]
 gi|312906418|ref|ZP_07765426.1| exodeoxyribonuclease III [Enterococcus faecalis DAPTO 512]
 gi|312979423|ref|ZP_07791111.1| exodeoxyribonuclease III [Enterococcus faecalis DAPTO 516]
 gi|256951514|gb|EEU68146.1| exonuclease III [Enterococcus faecalis Merz96]
 gi|291078138|gb|EFE15502.1| exodeoxyribonuclease III [Enterococcus faecalis R712]
 gi|291083824|gb|EFE20787.1| exodeoxyribonuclease III [Enterococcus faecalis S613]
 gi|310627572|gb|EFQ10855.1| exodeoxyribonuclease III [Enterococcus faecalis DAPTO 512]
 gi|311287794|gb|EFQ66350.1| exodeoxyribonuclease III [Enterococcus faecalis DAPTO 516]
 gi|315170467|gb|EFU14484.1| exodeoxyribonuclease III [Enterococcus faecalis TX1342]
          Length = 251

 Score =  189 bits (479), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 76/261 (29%), Positives = 115/261 (44%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +  N      E + D  CLQETK +      E L   + +     +
Sbjct: 1   MKCISWNVNGLRAVVKKNFMDVFNELDADFFCLQETKLQAGQIDLE-LPGYHQYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K + + +   L  +  D + R I   +                 +     
Sbjct: 60  KGYSGTAIFAKEEALSVRYGLGVEAHDQEGRVITLEYPEF-----FMVTCYTPNSQAELK 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +   +++W   F  +    L  E+P+I  GD N+  Q  D  N    + +A FT E RQ 
Sbjct: 115 RLAYRMTWEDAFRAY-LNELNQEKPVILCGDLNVAHQKIDLKNWKTNQKNAGFTPEERQK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L + GFTD  R  +     +YS+W Y  ++   N G RID+ ++S      L SA+I
Sbjct: 174 FTELLDSGFTDTFRYFYPEAEGIYSWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            T   G    SDH PV V LD
Sbjct: 234 HTDILG----SDHCPVEVVLD 250


>gi|227519480|ref|ZP_03949529.1| exodeoxyribonuclease [Enterococcus faecalis TX0104]
 gi|227073092|gb|EEI11055.1| exodeoxyribonuclease [Enterococcus faecalis TX0104]
 gi|315151770|gb|EFT95786.1| exodeoxyribonuclease III [Enterococcus faecalis TX0012]
          Length = 251

 Score =  189 bits (479), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 76/261 (29%), Positives = 115/261 (44%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +  N      E + D  CLQETK +      E L   + +     +
Sbjct: 1   MKCISWNVNGLRAVVKKNFMDVFNELDADFFCLQETKLQAGQIDLE-LPGYHQYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K + + +   L  +  D + R I   +                 +     
Sbjct: 60  KGYSGTAIFAKEEALSVRYGLGIEAHDQEGRVITLEYPEF-----FIVTCYTPNSQAELK 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +   +++W   F  +    L  E+P+I  GD N+  Q  D  N    + +A FT E RQ 
Sbjct: 115 RLAYRMTWEDAFSAY-LNELNQEKPVILCGDLNVAHQNIDLKNWKTNQKNAGFTPEERQK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L + GFTD  R  +     +YS+W Y  ++   N G RID+ ++S      L SA+I
Sbjct: 174 FTELLDSGFTDTFRYFYPEAEGIYSWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            T   G    SDH PV V LD
Sbjct: 234 HTDILG----SDHCPVEVVLD 250


>gi|288927024|ref|ZP_06420917.1| exodeoxyribonuclease III [Prevotella buccae D17]
 gi|288336198|gb|EFC74586.1| exodeoxyribonuclease III [Prevotella buccae D17]
          Length = 249

 Score =  189 bits (479), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 68/260 (26%), Positives = 109/260 (41%), Gaps = 12/260 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +        K  + D  CLQETK ++     +  +  + +     +
Sbjct: 1   MRFISWNVNGLRACVSKGFEESFKALDADFFCLQETKMQEGQLNLQ-FEGYDSYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K++P+ +   L  ++ D + R I                       +   
Sbjct: 60  KGYSGTAIYTKHKPLNVTYGLGIEEHDHEGRVITLEMEDFYLITVYTPNSQDELRRLDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +       Q L+ ++P+I  GD N+  +  D  NP     +A FT E R+ 
Sbjct: 120 M------TWEDDFLKYIQGLDAKKPVIVCGDLNVAHEEIDLKNPKTNRRNAGFTDEEREK 173

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
                N GFTD+ R  +     YS+W Y   +  KN G RID+ ++S      L  A+I 
Sbjct: 174 MTITLNSGFTDSFRYKYPEQVTYSWWSYRFHAREKNAGWRIDYFLISNRLRDRLVDAKIH 233

Query: 243 TKPRGWTKPSDHTPVIVSLD 262
           T+  G    SDH PV + L 
Sbjct: 234 TEVYG----SDHCPVELDLK 249


>gi|197106478|ref|YP_002131855.1| exodeoxyribonuclease III [Phenylobacterium zucineum HLK1]
 gi|196479898|gb|ACG79426.1| exodeoxyribonuclease III [Phenylobacterium zucineum HLK1]
          Length = 256

 Score =  189 bits (479), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 93/261 (35%), Positives = 150/261 (57%), Gaps = 7/261 (2%)

Query: 4   VTVATWNV-NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + +AT+N+ N ++ R+ NL  W+ E  PD++CLQE K  D  FP   L++  Y     G+
Sbjct: 1   MRIATYNISNVVK-RLPNLLEWLDERRPDVVCLQELKAADALFPQAELEAAGYGAVWQGE 59

Query: 63  KSYNGVAILSKY-QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +++NGVAIL++  +P+     LPGD  D QAR++EA        + + ++YLP+GNP   
Sbjct: 60  RTWNGVAILARGAEPVATRYGLPGDPTDRQARYVEAAVNG----VLVASIYLPNGNPQPG 115

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            K+  K++W  R +  A   +    P+  AGD+N++P   D Y       DA    + R 
Sbjct: 116 PKFAYKLAWFDRLIAHAEGLVASGAPVALAGDFNVVPTALDIYRVKPHTTDALQQPQTRA 175

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           ++++L + G+TDA+RA H    ++SFWDY  ++W ++ G+R+D ++LSP     L +A +
Sbjct: 176 AWRRLLDQGWTDAVRALHPDAPMFSFWDYLRNAWDRDAGMRLDAVLLSPSLAPRLRAAGV 235

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
           D   RG    SDH PV + LD
Sbjct: 236 DRDVRGRPGASDHAPVWIELD 256


>gi|209883511|ref|YP_002287368.1| exodeoxyribonuclease III xth [Oligotropha carboxidovorans OM5]
 gi|209871707|gb|ACI91503.1| exodeoxyribonuclease III xth [Oligotropha carboxidovorans OM5]
          Length = 271

 Score =  188 bits (478), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 88/268 (32%), Positives = 124/268 (46%), Gaps = 9/268 (3%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQK 63
           T+ATWN+NS+R RI  +A ++K   PD++CLQETK  D  FP +  Q L Y HI   GQK
Sbjct: 4   TIATWNINSVRLRIDLVAKFLKNRRPDVLCLQETKCIDDVFPLKRFQRLGYEHIALNGQK 63

Query: 64  SYNGVAILSKYQPI-EIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT-- 120
            Y+GVAI+SK   + + +    G                    L + N Y+P G  I   
Sbjct: 64  GYHGVAIVSKRPFLSKDIRMFCGKVDSRHISVAFGESAGLAAPLVLHNFYVPAGGDIPDP 123

Query: 121 --STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL- 177
             + K++ K+S++           E     I  GD N+ P  HD ++     N    T  
Sbjct: 124 ALNPKFEHKLSFLDEMRDCTPLHAEDGANHILVGDLNVAPHEHDVWSHRQLLNVVSHTPV 183

Query: 178 EVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSL 235
           E  +        G+ D  R        +Y++W Y A  W+  N+G R+DHI +SP     
Sbjct: 184 ECEKLLAVQAQGGWIDVARQRIPMDEKVYTWWSYRAADWTVGNRGRRLDHIWVSPALGDK 243

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +   RI    R W +PSDH PV   LDI
Sbjct: 244 VRDFRILRDARSWERPSDHVPVTAVLDI 271


>gi|126463827|ref|YP_001044940.1| exodeoxyribonuclease III Xth [Rhodobacter sphaeroides ATCC 17029]
 gi|126105638|gb|ABN78168.1| Exodeoxyribonuclease III [Rhodobacter sphaeroides ATCC 17029]
          Length = 255

 Score =  188 bits (478), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 96/258 (37%), Positives = 146/258 (56%), Gaps = 4/258 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+NVN +  R+  L  W++E  PD++CLQE K     FP   L++  Y     GQK
Sbjct: 1   MRIATFNVNGVNGRLPVLLRWLEEARPDVVCLQELKAASARFPAAALEAAGYGAVWHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           S+NGVAIL++               D ++R+IEA        + +G LYLP+GNP    K
Sbjct: 61  SWNGVAILARGAEPVQTRQDLPGVQDGESRYIEAAVEG----VLVGCLYLPNGNPAPGPK 116

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K++W    L  A + L  + P++ AGD+N++P   D Y P  W  DA F  EVR +F
Sbjct: 117 FAAKLAWFDHLLNHAEELLRHDVPVVLAGDFNVMPTDLDVYRPERWREDALFRPEVRAAF 176

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            +L   G+TD+IR  +    +Y+FWDY+ ++W ++ G+R+DH++LSP   + L  A +D 
Sbjct: 177 ARLLAQGWTDSIRHLYPEDRIYTFWDYFRNAWERDAGLRLDHLLLSPSLLTRLKGAGVDR 236

Query: 244 KPRGWTKPSDHTPVIVSL 261
             RGW K SDH P  + +
Sbjct: 237 HVRGWEKASDHAPAWIEI 254


>gi|157828881|ref|YP_001495123.1| exodeoxyribonuclease III [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165933608|ref|YP_001650397.1| exodeoxyribonuclease III [Rickettsia rickettsii str. Iowa]
 gi|157801362|gb|ABV76615.1| exodeoxyribonuclease III [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165908695|gb|ABY72991.1| exodeoxyribonuclease III [Rickettsia rickettsii str. Iowa]
          Length = 260

 Score =  188 bits (478), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 97/259 (37%), Positives = 144/259 (55%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+NSI+ R++ L  ++ + NPDI+ LQE K E   FPF+ L  L Y+    GQK
Sbjct: 1   MKIATWNINSIKTRLNLLRNFLSKENPDILLLQEIKCETAKFPFDALSDLPYNSYVHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           SYNGVAI+SK+   EI+   P +    QARF+E   ++      I +LY P+G+ + S K
Sbjct: 61  SYNGVAIISKFPVDEIIKDFPNNYCSDQARFLEIKLSLPIGFCNIISLYAPNGSFVGSDK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+++   F+ + S +   +E  I  GD+NI P   D Y+P +     CFT   ++  
Sbjct: 121 FVAKLAFYDNFINYLSTKKSFDEKTIIGGDFNIAPFDIDVYSPKLLAETTCFTEVEQKKL 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + + N GF D  R  H +   +S+WDY A  + +NKG+RID I+        L +  +D 
Sbjct: 181 RTILNSGFEDLYRLMHPSKQEFSWWDYRARCFEQNKGMRIDMILGCNNTIDYLENCYMDY 240

Query: 244 KPRGWTKPSDHTPVIVSLD 262
             R   KPSDH PVI S  
Sbjct: 241 NLRTQEKPSDHIPVIASFK 259


>gi|93006020|ref|YP_580457.1| exonuclease III [Psychrobacter cryohalolentis K5]
 gi|92393698|gb|ABE74973.1| Exodeoxyribonuclease III [Psychrobacter cryohalolentis K5]
          Length = 274

 Score =  188 bits (478), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 84/271 (30%), Positives = 131/271 (48%), Gaps = 10/271 (3%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +     +N+N IRAR H L A     +PD++ LQETK  D+ FP E ++ L YH+E  GQ
Sbjct: 1   MTRFVCFNINGIRARQHQLEAVRDIIDPDVMGLQETKVHDEQFPLENVEGLGYHVEYFGQ 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K++ GVA+LSK  PI +    P +D + Q RFI A +  + + + + N Y P G      
Sbjct: 61  KAHYGVALLSKVAPIFVQKGFPNEDEEAQKRFIHARYEFDGREIDVLNGYFPQGESQDHP 120

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175
            K+  K ++    + +          L+  GD NI P+  D           +      F
Sbjct: 121 TKFPMKRAYYADLMAYIDTLKAEGRSLVIMGDMNIAPEDIDIGIGEVNAKRWLKNRKTSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKN--KGIRIDHIMLSPEA 232
             E R+ +  L +   TD  R  +     LYS++DY +  +  +  +G+RIDHI+ +P+ 
Sbjct: 181 LPEEREWYSNLMSRELTDTYRLHYPESTELYSWFDYRSRGFDDDPKRGLRIDHILCTPDL 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                 A I  + R   KPSDH P+  + D+
Sbjct: 241 VECCVDAGISYELRAMEKPSDHAPIWTAFDL 271


>gi|315606307|ref|ZP_07881323.1| exodeoxyribonuclease III [Prevotella buccae ATCC 33574]
 gi|315251998|gb|EFU31971.1| exodeoxyribonuclease III [Prevotella buccae ATCC 33574]
          Length = 249

 Score =  188 bits (478), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 68/260 (26%), Positives = 109/260 (41%), Gaps = 12/260 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +        K  + D  CLQETK ++     +  +  + +     +
Sbjct: 1   MRFISWNVNGLRACVSKGFEESFKALDADFFCLQETKMQEGQLNLQ-FEGYDSYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K++P+ +   L  ++ D + R I                       +   
Sbjct: 60  KGYSGTAIYTKHKPLNVTYGLGIEEHDHEGRVITLEMEDFYLITVYTPNSQDELRRLNYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +       Q L+ ++P+I  GD N+  +  D  NP     +A FT E R+ 
Sbjct: 120 M------TWEDDFLKYIQGLDAKKPVIVCGDLNVAHEEIDLKNPKTNRRNAGFTDEEREK 173

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
                N GFTD+ R  +     YS+W Y   +  KN G RID+ ++S      L  A+I 
Sbjct: 174 MTITLNSGFTDSFRYKYPEQVTYSWWSYRFHAREKNAGWRIDYFLISNRLRDRLVDAKIH 233

Query: 243 TKPRGWTKPSDHTPVIVSLD 262
           T+  G    SDH PV + L 
Sbjct: 234 TEVYG----SDHCPVELDLK 249


>gi|268608445|ref|ZP_06142172.1| exodeoxyribonuclease [Ruminococcus flavefaciens FD-1]
          Length = 248

 Score =  188 bits (478), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 64/262 (24%), Positives = 111/262 (42%), Gaps = 17/262 (6%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETC 60
           + + +WNVN  RA +      +  E + DI C+QETK +             YH    + 
Sbjct: 1   MKLISWNVNGFRACLTKGFGDFFAEADADIFCIQETKMQPDQ---ADFSPEGYHKYFHSA 57

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+G A+ +K +P+ +   + G+  D                  + N          
Sbjct: 58  IKKGYSGTAVYTKKEPLSVTFGINGEHTDEGRVITCEYEDFYFVGCYVPNAQNELKRIDY 117

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +++         +R     L+ ++P+I+ GD N+     D  NP     +A F+ E R
Sbjct: 118 RMEFE-------DAMRGYLSELDKKKPVIYCGDLNVAHNEIDLKNPKSNVGNAGFSDEER 170

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
             F +L   GF+D+ R+ +     YS+W Y   +  KN G RID+ ++S      +  ++
Sbjct: 171 GKFTELLAAGFSDSYRSLYPEKIEYSWWSYRFKAREKNIGWRIDYFVVSDRFMPRVKDSQ 230

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I T   G    SDH PV + ++
Sbjct: 231 ILTDVTG----SDHCPVQLIIE 248


>gi|213965056|ref|ZP_03393254.1| exodeoxyribonuclease III [Corynebacterium amycolatum SK46]
 gi|213952170|gb|EEB63554.1| exodeoxyribonuclease III [Corynebacterium amycolatum SK46]
          Length = 265

 Score =  188 bits (478), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 72/267 (26%), Positives = 126/267 (47%), Gaps = 9/267 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +  WNVNS R R+  +   ++ N+ D++ +QETK +D  FP  T + L Y +   G  
Sbjct: 1   MRICVWNVNSARTRLDRMVEMLRRNDIDVLAVQETKCKDDQFPTATFEELGYQVAHHGLN 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQAR-----FIEATFTINTQTLRIGNLYLPHGNP 118
            +NGVAI+S+    +I    PG     +                   +R+ +LY+P+G  
Sbjct: 61  QWNGVAIISRVGLEDIQAGFPGQPGFNKDPDATPSLEARHIAATCGGVRVHSLYIPNGRD 120

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEE--PLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
           IT   ++ K+ +++R  +     L+ +     +  GD+NI P   D ++   +      T
Sbjct: 121 ITDPHFEYKLEFLERLRQHIIATLDDDPEATFMMGGDFNIAPTDGDVWSMAAFTGKTHVT 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
              R +F  L+  G  +  R      + +++WDY A  + K++G+RID  + SP   +  
Sbjct: 181 PPERAAFYALEQAGMKEVTRQFTP--NQWTYWDYKAGRFFKDEGMRIDFQLASPALATKA 238

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263
            +  ID + R     SDH PVIV  ++
Sbjct: 239 SAGFIDIEERQGKGASDHAPVIVDYEV 265


>gi|281422472|ref|ZP_06253471.1| exodeoxyribonuclease III [Prevotella copri DSM 18205]
 gi|281403455|gb|EFB34135.1| exodeoxyribonuclease III [Prevotella copri DSM 18205]
          Length = 250

 Score =  188 bits (478), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 73/259 (28%), Positives = 117/259 (45%), Gaps = 12/259 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +  +     KE + D  CLQETK ++     +  +    +     +
Sbjct: 1   MKFISWNVNGLRACVGKDFENQFKELDADFFCLQETKMQEGQLDLQ-FEGYESYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K++P+ +   +  ++ D + R I   +        +   Y P+       
Sbjct: 60  KGYSGTAIYTKHKPLNVSYGMGVEEHDHEGRIITLEYD----QFYLVTCYTPNSQTELKR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
              D     +   R   + L+ ++P+I  GD N+  +  D  NP     +A FT E R+ 
Sbjct: 116 L--DYRMTWEDDFRKFLKSLDAKKPVIICGDLNVAHEEIDIKNPKTNRRNAGFTDEEREK 173

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
              L N GFTD+ R  H     YS+W Y   +  KN G RID+ ++S      +  A+I 
Sbjct: 174 MTVLLNDGFTDSFRYLHPDEVTYSWWSYRFKAREKNAGWRIDYFLVSDRIKEQITEAKIH 233

Query: 243 TKPRGWTKPSDHTPVIVSL 261
           T+  G    SDH PV V L
Sbjct: 234 TEIMG----SDHCPVEVDL 248


>gi|86130871|ref|ZP_01049470.1| exodeoxyribonuclease III (Xth) [Dokdonia donghaensis MED134]
 gi|85818282|gb|EAQ39442.1| exodeoxyribonuclease III (Xth) [Dokdonia donghaensis MED134]
          Length = 254

 Score =  188 bits (478), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 73/264 (27%), Positives = 128/264 (48%), Gaps = 13/264 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60
           + + ++NVN IRA +  + A W+K+ +PD++ LQETK           + L Y  +  + 
Sbjct: 1   MKIVSYNVNGIRAALRKDFALWLKQTDPDVVLLQETKATPDQVDVAVFEELGYEHYWFSA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GVA+L+K  P  I        +D + R I   F      + + ++YLP G    
Sbjct: 61  QKKGYSGVAVLTKKTPKHIEYGTGIASMDFEGRNIRVDFD----DVSVMSMYLPSG--TN 114

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
           S + + K+ ++     + ++  + +  L+  GDYNI  +  D ++P+  +  + F    R
Sbjct: 115 SARLEHKLEYMDLLQDYVNELKQDKPNLVIGGDYNICHEAIDIHDPVRNKKVSGFLPVER 174

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           +        GF D+ R  +     Y++W Y A++ + NKG RID+ M+S      +  A 
Sbjct: 175 EWIGNFMESGFIDSFRHLNKEPDNYTWWSYRANARANNKGWRIDYNMVSEPLKDKISRAI 234

Query: 241 IDTKPRGWTKPSDHTPVIVSLDIP 264
           I +      K SDH P +V LD+ 
Sbjct: 235 ILSDA----KHSDHCPHMVELDLS 254


>gi|262200666|ref|YP_003271874.1| exodeoxyribonuclease III Xth [Gordonia bronchialis DSM 43247]
 gi|262084013|gb|ACY19981.1| exodeoxyribonuclease III Xth [Gordonia bronchialis DSM 43247]
          Length = 262

 Score =  188 bits (478), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 78/263 (29%), Positives = 129/263 (49%), Gaps = 8/263 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSIRAR   + AW++ ++ D++ +QETK  D  FP  +     Y +   GQ 
Sbjct: 1   MRIATWNVNSIRARSETVVAWMEHHDVDVLAMQETKCHDDAFPLMSFLVAGYDVTHVGQG 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDL---DVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           +YNGVAI S+    EI     G      D +        +     +R+ +LY+P+G  I 
Sbjct: 61  AYNGVAIASRVGLDEIEVGFEGMPPLSVDGREIVEARAISARCAGVRVWSLYVPNGRAID 120

Query: 121 STKYDDKISWIKRFLRFASQRLELEE--PLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
              Y  K++W++     ++  L  +    ++ AGD+N+  +  D ++P  +      +  
Sbjct: 121 DPHYRYKLAWLEALADRSALWLAHDPAAQIMLAGDWNVAQRDTDVWDPGFFAGKPHVSDA 180

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
            R +     + G TD+          Y+FWDY +  + +N+G+RID+ + SP   + +  
Sbjct: 181 ERAAIAAFLDAGLTDSAL---PYADGYTFWDYTSLRFPRNEGMRIDYALCSPALDTRVLG 237

Query: 239 ARIDTKPRGWTKPSDHTPVIVSL 261
           A +D   R     SDH PVIV L
Sbjct: 238 ATVDRDARKPKGASDHAPVIVDL 260


>gi|302877288|ref|YP_003845852.1| exodeoxyribonuclease III Xth [Gallionella capsiferriformans ES-2]
 gi|302580077|gb|ADL54088.1| exodeoxyribonuclease III Xth [Gallionella capsiferriformans ES-2]
          Length = 254

 Score =  188 bits (478), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 66/262 (25%), Positives = 110/262 (41%), Gaps = 13/262 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETC 60
           + + + N+N IR+        W+ + + D+ICLQE K +  +     L  L YH      
Sbjct: 1   MRIISVNLNGIRSASSKGFYEWLAQQDADVICLQELKAQAADMTEHMLTPLGYHGYFHYA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GV I  +  P  ++  L  +  D + R++ A F   +                 
Sbjct: 61  EKKGYSGVGIYCRELPKNVIVGLGIEQFDAEGRYLCADFADYSV-----VSLYLPSGSSG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   K S+++ FL    +       +I  GD+NI  +  D  N    + ++ F  E R
Sbjct: 116 EERQGVKFSFMEAFLPHLRELRASGREVIVCGDWNIAHKEIDLKNWRGNKKNSGFLPEER 175

Query: 181 QSFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
               +L +  GF D  R  H     Y++W     +W+KN G RID+ + +P       SA
Sbjct: 176 AWLTQLFDEVGFVDVFRRVHPELEAYTWWSNRGQAWAKNVGWRIDYQIATPAIAGRATSA 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261
            I  + R     SDH P+I+  
Sbjct: 236 SIYKEQR----FSDHAPLIIDY 253


>gi|284030471|ref|YP_003380402.1| exodeoxyribonuclease III Xth [Kribbella flavida DSM 17836]
 gi|283809764|gb|ADB31603.1| exodeoxyribonuclease III Xth [Kribbella flavida DSM 17836]
          Length = 286

 Score =  188 bits (477), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 88/277 (31%), Positives = 126/277 (45%), Gaps = 15/277 (5%)

Query: 7   ATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPF---ETLQSLNYHIETCGQK 63
           ATWNVNS++ R+  L  W+ E  PD++CLQETK  D  F       L +  Y     G+ 
Sbjct: 2   ATWNVNSVKQRMPRLLDWLDERAPDVVCLQETKLADDAFSSLLGAELTARGYETALYGEV 61

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVAILSK    ++VT +                T     +RI +LY+P+G    S  
Sbjct: 62  QWNGVAILSKVGLDDVVTGVANAPGFPNPEARAVAATCGG--IRIHSLYVPNGRVPDSEH 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K++W+       +         I  GD NI P   D ++P  ++     T   RQ+ 
Sbjct: 120 YHYKLAWLAALRDVVAGG---PAEQIVCGDMNIAPTDADVFDPAAFQGSTHVTAPERQAL 176

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            +L   G  D +R    T  ++S+WDY A  + ++ G+RID  + S      + +A ID 
Sbjct: 177 AELMATGLHDVVRDRWPTERVFSYWDYRAGMFHQDLGMRIDLTLASDPVAERVKAAWIDR 236

Query: 244 KPRGWTKPSDHTPVIVSLDI-------PEPRKKQQDS 273
           K R  T PSDH PVIV LD+       P         
Sbjct: 237 KARKGTGPSDHAPVIVDLDVAPDGDIGPVVPPPSNPR 273


>gi|313894410|ref|ZP_07827975.1| exodeoxyribonuclease III [Veillonella sp. oral taxon 158 str.
           F0412]
 gi|313441234|gb|EFR59661.1| exodeoxyribonuclease III [Veillonella sp. oral taxon 158 str.
           F0412]
          Length = 251

 Score =  188 bits (477), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 68/262 (25%), Positives = 116/262 (44%), Gaps = 13/262 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +         E + DI CLQETK + +    E L     +  +  +
Sbjct: 1   MKLISWNVNGLRAAVTKGFMESFNELDADIFCLQETKLQPEQISLE-LPGYEQYWNSAVK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G A+ ++ +P+ +   +  ++ D + R I A +        +   Y P+     + 
Sbjct: 60  KGYSGTAVFTRIKPLSVTNGIGIEEHDQEGRVITAEYD----NFYLVCCYTPNSQRELAR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
              +     +   R     L+ ++P+I  GD N+  Q  D  NP     +A F+ E R  
Sbjct: 116 L--EYRMAWEDAFRNYLLELDKKKPVILCGDLNVAHQEIDLKNPKTNRKNAGFSDEERAK 173

Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             +L   GFTD  R  +      YS+W Y   +  +N G RID+ + S      +  A+I
Sbjct: 174 MTELLGAGFTDTFRHLYPDAIEQYSWWSYMGKARERNTGWRIDYFITSKRLDDKIQEAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
             +  G    SDH PV + +D+
Sbjct: 234 HQQIFG----SDHCPVELDIDL 251


>gi|310826147|ref|YP_003958504.1| exodeoxyribonuclease III [Eubacterium limosum KIST612]
 gi|308737881|gb|ADO35541.1| exodeoxyribonuclease III [Eubacterium limosum KIST612]
          Length = 254

 Score =  188 bits (477), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 72/263 (27%), Positives = 112/263 (42%), Gaps = 12/263 (4%)

Query: 4   VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC-- 60
           + + +WNVN IRA        W++   PDI+CLQE K  +     +      YH      
Sbjct: 1   MKLYSWNVNGIRAVAQKGFTEWVEAAQPDILCLQEVKAAEDQISEDIRCIPGYHSFFHAA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+G A+  K +PI I T L  D  + + R I   +        + N+Y P+G    
Sbjct: 61  ERKGYSGTAVYYKEEPISITTGLSEDRFNHEGRTIIMEYP----EFTLFNIYFPNGQ-KD 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   K+ +   FL+  +  +   + +I  GD N      D  NP      + F    R
Sbjct: 116 DERLQFKMDFYDCFLKDVNALVAQGKKVIICGDVNTAHTEMDLKNPKSNAKRSGFLPMER 175

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           +        G+ D  R  H     YS+W Y  ++ + N G RID+  +S  A  ++  A 
Sbjct: 176 EWLDHFFENGYVDTYRHLHPDTVEYSWWSYRFNARANNAGWRIDYFFVSDNAIDMVKDAA 235

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263
           I T+  G    SDH PV + + I
Sbjct: 236 IHTEVTG----SDHCPVSIEIKI 254


>gi|256394880|ref|YP_003116444.1| exodeoxyribonuclease III Xth [Catenulispora acidiphila DSM 44928]
 gi|256361106|gb|ACU74603.1| exodeoxyribonuclease III Xth [Catenulispora acidiphila DSM 44928]
          Length = 294

 Score =  188 bits (477), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 68/278 (24%), Positives = 106/278 (38%), Gaps = 6/278 (2%)

Query: 1   MSVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--I 57
           M V+TV+T NVN IRA        W+K    D++CLQE + E   FP +      +H  +
Sbjct: 1   MRVLTVSTVNVNGIRAAAAKGFTEWLKATPADVVCLQEVRAEPDQFPADLRAPEGWHTLV 60

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
                K   GVA+ S+  P          + D   R+ E      T            G 
Sbjct: 61  APAAAKGRAGVALFSRVAPTTTRIGFGTPEFDTAGRYAEMHLPTLTIASLYLPT-GEVGT 119

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
              + K      +       +++  +    ++  GD+NI     D  N    +  + F  
Sbjct: 120 ERQAEKERFMAGFHAHLSALSTEAAQTGRAILICGDWNIAHDKADIKNWRANQKSSGFLP 179

Query: 178 EVRQS-FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
           E RQ     L   G+ D +R  H      YS+W +   ++  + G RID+ M S    +L
Sbjct: 180 EERQWLTSVLTEAGYADVVRNLHPGVDGPYSWWSFRGKAFDNDTGWRIDYQMASANLAAL 239

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDS 273
             SA+++       + SDH PV  + D          S
Sbjct: 240 ATSAKVERAATYAERWSDHAPVTCAYDWDLAAVPAPRS 277


>gi|94499690|ref|ZP_01306227.1| exodeoxyribonuclease III [Oceanobacter sp. RED65]
 gi|94428444|gb|EAT13417.1| exodeoxyribonuclease III [Oceanobacter sp. RED65]
          Length = 271

 Score =  188 bits (477), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 77/271 (28%), Positives = 128/271 (47%), Gaps = 11/271 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +RAR+H + A   +   DII LQE K   +  P   ++++ Y  +   QK
Sbjct: 1   MRIVSFNINGVRARLHQIDAIKHQLKADIIGLQEVKAAPEVVPVADIEAIGYKADIHSQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL--RIGNLYLPHGNPITS 121
           ++ GVA LS    IE     PGD  D Q RFI + + +N   +   +   +    N    
Sbjct: 61  AHYGVANLSLNPSIECQQGFPGDTDDDQKRFIHSQYKLNNGEILHVLNGYFPQGENRQHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN------DACF 175
           TK+  K  +      + ++ L  +  ++  GD N+     D                  F
Sbjct: 121 TKFPAKRKYYADLKDYLNKHLSPDNHIVVMGDMNVALHDEDIGIGEQNRKRWLRTEKCAF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKN--KGIRIDHIMLSPEA 232
             E R+  Q + + G  D+ R  H   +  YS++DY +  ++ +  +G+RID+I+LS   
Sbjct: 181 LPEEREWLQGILDWGLADSFRTQHPDTNDRYSWFDYRSKGFADDPKRGLRIDYILLSKSL 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            S L +A ID   RG  KPSDH P+ V L++
Sbjct: 241 MSKLKTADIDYDIRGMEKPSDHAPIYVELNL 271


>gi|257420126|ref|ZP_05597120.1| exonuclease III [Enterococcus faecalis T11]
 gi|257161954|gb|EEU91914.1| exonuclease III [Enterococcus faecalis T11]
          Length = 251

 Score =  188 bits (477), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 76/261 (29%), Positives = 115/261 (44%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +  N      E + D  CLQETK +      E L   + +     +
Sbjct: 1   MKCISWNVNGLRAVVKKNFMDVFSELDADFFCLQETKLQAGQIDLE-LPGYHQYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K + + +   L  +  D + R I   +                 +     
Sbjct: 60  KGYSGTAIFAKEEALSVRYGLGVEAHDQEGRVITLEYPEF-----FMVTCYTPNSQAELK 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +   +++W   F  +    L  E+P+I  GD N+  Q  D  N    + +A FT E RQ 
Sbjct: 115 RLAYRMTWEDAFRAY-LNELNQEKPVILCGDLNVAHQKIDLKNWKTNQKNAGFTPEERQK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L + GFTD  R  +     +YS+W Y  ++   N G RID+ ++S      L SA+I
Sbjct: 174 FTELLDSGFTDTFRYFYPEAEGIYSWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            T   G    SDH PV V LD
Sbjct: 234 HTDILG----SDHCPVEVVLD 250


>gi|148653062|ref|YP_001280155.1| exonuclease III [Psychrobacter sp. PRwf-1]
 gi|148572146|gb|ABQ94205.1| Exodeoxyribonuclease III [Psychrobacter sp. PRwf-1]
          Length = 271

 Score =  188 bits (477), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 84/270 (31%), Positives = 133/270 (49%), Gaps = 10/270 (3%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +    ++N+N IRAR H L A     +PD++ LQETK  D+ FP E ++SL YH+E  GQ
Sbjct: 1   MTRFVSFNINGIRARQHQLEAVRDIIDPDVMGLQETKVHDEQFPLELVESLGYHVEFFGQ 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121
           K++ GVA++SK +PI +    P +  D Q RFI A +  N Q + + N Y P G      
Sbjct: 61  KAHYGVALVSKVKPIFVQKGFPDEPEDAQKRFIHARYVFNGQEVDVLNGYFPQGESRNHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175
           TK+  K ++     ++          LI  GD NI P+ +D           + +    F
Sbjct: 121 TKFPMKRAYYADLNQYIDALKAEGRTLIIMGDMNIAPEDNDIGIGEKNAKRWLSQGKTSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKN--KGIRIDHIMLSPEA 232
             E R+ +  L +   +D  R  +   +  +S++DY +  +  +  +G+RIDHI+ + + 
Sbjct: 181 LPEEREWYSALMSRELSDTYRIHYPDANDTFSWFDYRSRGFDDDPKRGLRIDHILCTQDI 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
                 A I  + R   KPSDH P+  S  
Sbjct: 241 EDKCIDAGISYELRAMEKPSDHAPIWASFK 270


>gi|326335986|ref|ZP_08202163.1| exodeoxyribonuclease III [Capnocytophaga sp. oral taxon 338 str.
           F0234]
 gi|325691950|gb|EGD33912.1| exodeoxyribonuclease III [Capnocytophaga sp. oral taxon 338 str.
           F0234]
          Length = 253

 Score =  188 bits (477), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 79/263 (30%), Positives = 129/263 (49%), Gaps = 14/263 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY---HIET 59
           + + ++NVN IRA +      W+   +PD+ICLQE K  +       L+   Y   +  +
Sbjct: 1   MKIFSYNVNGIRAAMSKGFVQWLSAASPDVICLQEIKALESQIDLLALEEAGYRYHYFHS 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GVAILSK +P  +      D +D + R + A +      L I +LYLP G  I
Sbjct: 61  AEKKGYSGVAILSKKEPEHVEIGTGIDYMDKEGRILRAEYG----DLSIMSLYLPSGTNI 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                D K+ ++  F ++ +   ++   L+  GDYNI  +  D ++PI   N + F    
Sbjct: 117 DR--LDHKLQFMADFQKYINTLKKVHPNLVICGDYNICHEAIDIHDPIRNANVSGFLPVE 174

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R+        GF D+ R  +   H YS+W Y A++ + NKG RID+ +++    S +  A
Sbjct: 175 RKWLDDFLKSGFIDSFRFFNKEPHNYSWWSYRANARANNKGWRIDYCLVAQPLESRIVRA 234

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
            I  +     K SDH P++V + 
Sbjct: 235 AILPEA----KHSDHCPILVEIK 253


>gi|257079900|ref|ZP_05574261.1| exonuclease III [Enterococcus faecalis JH1]
 gi|294779916|ref|ZP_06745298.1| exodeoxyribonuclease III [Enterococcus faecalis PC1.1]
 gi|307269235|ref|ZP_07550589.1| exodeoxyribonuclease III [Enterococcus faecalis TX4248]
 gi|256987930|gb|EEU75232.1| exonuclease III [Enterococcus faecalis JH1]
 gi|294453028|gb|EFG21448.1| exodeoxyribonuclease III [Enterococcus faecalis PC1.1]
 gi|306514454|gb|EFM83015.1| exodeoxyribonuclease III [Enterococcus faecalis TX4248]
 gi|329578016|gb|EGG59431.1| exodeoxyribonuclease III [Enterococcus faecalis TX1467]
          Length = 251

 Score =  188 bits (477), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 76/261 (29%), Positives = 115/261 (44%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +  N      E + D  CLQETK +      E L   + +     +
Sbjct: 1   MKCISWNVNGLRAVVKKNFMDVFNELDADFFCLQETKLQAGQIDLE-LPGYHQYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K + + +   L  +  D + R I   +                 +     
Sbjct: 60  KGYSGTAIFAKEEALSVRYGLGIEAHDQEGRMITLEYPEF-----FMVTCYTPNSQAELK 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +   +++W   F  +    L  E+P+I  GD N+  Q  D  N    + +A FT E RQ 
Sbjct: 115 RLAYRMTWEDAFRAY-LNELNQEKPVILCGDLNVAHQNIDLKNWKTNQKNAGFTPEERQK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L + GFTD  R  +     +YS+W Y  ++   N G RID+ ++S      L SA+I
Sbjct: 174 FTELLDSGFTDTFRYFYPEAEGIYSWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            T   G    SDH PV V LD
Sbjct: 234 HTDILG----SDHCPVEVVLD 250


>gi|256616763|ref|ZP_05473609.1| exonuclease III [Enterococcus faecalis ATCC 4200]
 gi|256596290|gb|EEU15466.1| exonuclease III [Enterococcus faecalis ATCC 4200]
          Length = 251

 Score =  188 bits (477), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 75/261 (28%), Positives = 115/261 (44%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WN+N +RA +  N      E + D  CLQETK +      E L   + +     +
Sbjct: 1   MKCISWNINGLRAVVKKNFMDVFNELDADFFCLQETKLQAGQIDLE-LPGYHQYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K + + +   L  +  D + R I   +                 +     
Sbjct: 60  KGYSGTAIFAKEEALSVRYGLGIEAHDQEGRVITLEYPEF-----FMVTCYTPNSQAELK 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +   +++W   F  +    L  E+P+I  GD N+  Q  D  N    + +A FT E RQ 
Sbjct: 115 RLAYRMTWEDAFRAY-LNELNQEKPVILCGDLNVAHQKIDLKNWKTNQKNAGFTPEERQK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L + GFTD  R  +     +YS+W Y  ++   N G RID+ ++S      L SA+I
Sbjct: 174 FTELLDSGFTDTFRYFYPEAEGIYSWWSYRFNARKNNAGWRIDYFVVSESLNERLVSAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            T   G    SDH PV V LD
Sbjct: 234 HTDILG----SDHCPVEVVLD 250


>gi|312131268|ref|YP_003998608.1| exodeoxyribonuclease iii xth [Leadbetterella byssophila DSM 17132]
 gi|311907814|gb|ADQ18255.1| exodeoxyribonuclease III Xth [Leadbetterella byssophila DSM 17132]
          Length = 254

 Score =  188 bits (477), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 75/263 (28%), Positives = 110/263 (41%), Gaps = 12/263 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + T+NVN IR+ I   L  W+ + NPDI+CLQE K  +          L YH      
Sbjct: 1   MKITTFNVNGIRSAINKGLLEWLSKENPDILCLQEIKLSETELVESLFTDLGYHCYWYPA 60

Query: 62  -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GVAILSK    +IV  +  +  D + R I A F                     
Sbjct: 61  IKKGYSGVAILSKIPANQIVKGIEHELYDSEGRIILAQFADFQL-----VSAYFPSGTTG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             + + K  ++  FL +A +      PL+  GD NI  +  D +NP      + F  E R
Sbjct: 116 DVRQEIKYKFLDDFLIYAEKLKATGTPLLICGDVNICHKEIDIHNPKSNAKTSGFLPEER 175

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
               +    GF D  R      H Y++W Y A +  KN G RID+I  +      + +  
Sbjct: 176 AWVDRFCECGFVDTFRHKVKDPHHYTWWSYRAGARGKNLGWRIDYIFAANMLPESIQNVH 235

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263
           I +        SDH PV +   +
Sbjct: 236 IHSDVM----MSDHCPVSLEFKL 254


>gi|308209125|gb|ADO20907.1| deoxyribonuclease-1 [Saccharopolyspora spinosa]
          Length = 272

 Score =  188 bits (477), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 67/268 (25%), Positives = 111/268 (41%), Gaps = 13/268 (4%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IET 59
           V+TV+T NVN +RA        W+     D+IC+QET+ E      E  +   +H  +  
Sbjct: 9   VLTVSTVNVNGLRAAAKKGFVEWLAATRADVICMQETRAEPDQLTSEVREPAGWHTVLAP 68

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
              K   GVAI S+ +P  +       + D   R+ E           +          +
Sbjct: 69  SSAKGRAGVAIYSRAEPAAVRIGFGSAEFDESGRYAEIDLPG-----VVVASLYLPSGDV 123

Query: 120 TSTKYDDKISWIKRFLRF----ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
            + + D+K  ++K F  +      +       ++  GD+NI  Q  D  N    + +A F
Sbjct: 124 GTPRQDEKERFMKEFRAYLGDLRERAAAEGREVLVCGDWNIAHQQIDLKNWKSNQKEAGF 183

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R    ++ + G+ D +R  H      YS+W Y   ++  + G RID+I+ SP   S
Sbjct: 184 LPEERAWLTEVFDSGYADVLRRLHPEGPGPYSWWSYRGKAFDNDSGWRIDYIVSSPGLAS 243

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
               A ++       + SDH PV  + D
Sbjct: 244 RCTDAYVEKAASYDQRWSDHAPVTAAFD 271


>gi|212694611|ref|ZP_03302739.1| hypothetical protein BACDOR_04139 [Bacteroides dorei DSM 17855]
 gi|237711123|ref|ZP_04541604.1| exodeoxyribonuclease [Bacteroides sp. 9_1_42FAA]
 gi|237727489|ref|ZP_04557970.1| exodeoxyribonuclease [Bacteroides sp. D4]
 gi|265750710|ref|ZP_06086773.1| exodeoxyribonuclease III [Bacteroides sp. 3_1_33FAA]
 gi|212663112|gb|EEB23686.1| hypothetical protein BACDOR_04139 [Bacteroides dorei DSM 17855]
 gi|229434345|gb|EEO44422.1| exodeoxyribonuclease [Bacteroides dorei 5_1_36/D4]
 gi|229454967|gb|EEO60688.1| exodeoxyribonuclease [Bacteroides sp. 9_1_42FAA]
 gi|263237606|gb|EEZ23056.1| exodeoxyribonuclease III [Bacteroides sp. 3_1_33FAA]
          Length = 252

 Score =  188 bits (477), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 70/263 (26%), Positives = 108/263 (41%), Gaps = 13/263 (4%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++   +WNVN +RA      A        D  CLQETK ++     +  +    +     
Sbjct: 1   MLKFISWNVNGLRACYDKGFADAFNRLEADFFCLQETKMQEGQLDVQ-FEGYQSYWNYAE 59

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G AI SK +P+ +   L  ++ D + R I                       +  
Sbjct: 60  KKGYSGTAIFSKVKPLSVTYGLGIEEHDHEGRVITLELESYYLITVYTPNSQEELRRLDY 119

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
                         R   ++LE ++P+I  GD N+  +  D  NP     +A FT E R 
Sbjct: 120 RM------KWDDDFRAYLKKLEEKKPVIVCGDLNVAHKEIDLKNPKTNRKNAGFTDEERA 173

Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            F  L   GFTD  R  +     +YS+W Y   +  KN G RID+ + S      L  A+
Sbjct: 174 KFTTLLESGFTDTFRYFYPEQEGIYSWWSYRFKAREKNAGWRIDYFLTSDSLKDKLRGAQ 233

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263
           I T   G    SDH PV +++++
Sbjct: 234 IHTDILG----SDHCPVELTIEL 252


>gi|86739888|ref|YP_480288.1| exodeoxyribonuclease III [Frankia sp. CcI3]
 gi|86566750|gb|ABD10559.1| Exodeoxyribonuclease III [Frankia sp. CcI3]
          Length = 304

 Score =  188 bits (477), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 82/262 (31%), Positives = 122/262 (46%), Gaps = 6/262 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFP---FETLQSLNYHIETC 60
           V +ATWN+NS +AR   L  W+    PD++CLQETK  D  F     E L    Y +   
Sbjct: 8   VRIATWNINSAKARQARLIEWLDRAEPDVVCLQETKLADDAFLELFDEDLFRRGYRVAHH 67

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           G   +NGVAILS+    ++   LPGD             T     +RI +LY+P+G  I 
Sbjct: 68  GDGRWNGVAILSRDTLDDVARGLPGDPGFPGPEPRAIAATCGG--IRIWSLYVPNGRTID 125

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
              Y  K++W+       ++       +   GD+NI P   D ++   +E     T   R
Sbjct: 126 DPHYAYKLAWLAALREVVAEATTQGAVM-TLGDFNIAPTDVDVWDITQFEGATHVTPAER 184

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            +  +L + G  D +RA      +Y++WDY    + KN G+RID  + + +    + +  
Sbjct: 185 AALAELVDAGLIDVLRARWPDDVVYTYWDYRQLCFPKNLGMRIDLALATADVAGRVRAVW 244

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           +D   R     SDH PVIV LD
Sbjct: 245 VDRAARKGVGTSDHAPVIVDLD 266


>gi|262277234|ref|ZP_06055027.1| exodeoxyribonuclease III [alpha proteobacterium HIMB114]
 gi|262224337|gb|EEY74796.1| exodeoxyribonuclease III [alpha proteobacterium HIMB114]
          Length = 263

 Score =  188 bits (477), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 100/259 (38%), Positives = 155/259 (59%), Gaps = 2/259 (0%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
            + +++WN+NS+R R  N+  ++ + +PDII  QE K ED  FP +  +  NY+    GQ
Sbjct: 7   TMIISSWNINSVRIRTENIEKYLDKIDPDIIMFQEIKCEDDKFPNDFFEKKNYNCYVFGQ 66

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           KSYNGVAI+SK + + I         + Q+R I A   I  + +++  +YLP+GNP+ + 
Sbjct: 67  KSYNGVAIISKKKLLNIDKSFKD--PNKQSRLIAADIKIAGKLVKLICIYLPNGNPVNTD 124

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           KY  K+ W+  F+ F  + +   + +I  GD+NIIP  +D  NP  W NDA + LE+R+ 
Sbjct: 125 KYPYKLKWLNNFINFIKKEIHNYDGIIIGGDFNIIPNSNDVGNPEDWGNDALYRLEIRKE 184

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F+K+ N+GF D+ R  +     Y+FWDY   SW +NKG+RIDH +++    S + +  ID
Sbjct: 185 FRKILNLGFKDSFRLFNTEDKQYTFWDYTQGSWQRNKGLRIDHFLITDSICSKIKNVEID 244

Query: 243 TKPRGWTKPSDHTPVIVSL 261
              RG  KPSDH+P+ V+ 
Sbjct: 245 KFTRGLNKPSDHSPIRVNF 263


>gi|325679379|ref|ZP_08158964.1| exodeoxyribonuclease III [Ruminococcus albus 8]
 gi|324108976|gb|EGC03207.1| exodeoxyribonuclease III [Ruminococcus albus 8]
          Length = 250

 Score =  188 bits (477), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 64/264 (24%), Positives = 107/264 (40%), Gaps = 18/264 (6%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETC 60
           + + +WNVN  RA +      + K  + DI C+QETK +             YH    + 
Sbjct: 1   MKLISWNVNGFRACLQKGFEDFFKSADADIFCIQETKMQPDQ---ADFSPEGYHKYFHSA 57

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+G A+ +K +P  +   L G   D                  + N          
Sbjct: 58  VKKGYSGTAVYTKNEPKAVTYGLNGAHTDEGRVITCEYDDFYFVCCYVPNAQNELKRIDY 117

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +++         +R     L+  +P+I+ GD N+  +  D  NP     +A F+ + R
Sbjct: 118 RMEFE-------DDMRAYLCGLDKLKPVIYCGDLNVAHEEIDLKNPKSNVGNAGFSDQER 170

Query: 181 QSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
             F +L   GF D  R  +     +YS+W Y  ++   N G RID+ ++S      +  +
Sbjct: 171 GKFTELLAAGFADTFRRLYPETTGVYSWWSYRFNARKNNAGWRIDYFVVSERLMDKVGDS 230

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
           +I T   G    SDH PV + + I
Sbjct: 231 KILTDVMG----SDHCPVQLDITI 250


>gi|170780681|ref|YP_001709013.1| putative exonuclease [Clavibacter michiganensis subsp. sepedonicus]
 gi|169155249|emb|CAQ00350.1| putative exonuclease [Clavibacter michiganensis subsp. sepedonicus]
          Length = 278

 Score =  188 bits (477), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 74/277 (26%), Positives = 125/277 (45%), Gaps = 10/277 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + VATWNVNSIR R+  +  W+   + D++ +QE K + + FP    +  +Y +   G  
Sbjct: 1   MRVATWNVNSIRTRVGRVVDWLVREDVDVLAMQEIKCKPEQFPMAAFEEADYEVAVHGLS 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLD------VQARFIEATFTINTQTLRIGNLYLPHGN 117
            +NGVAI S+    ++VT   G           Q              +R+ +LY+P+G 
Sbjct: 61  QWNGVAIASRLPLEDVVTTFEGMPRFGKPDATGQPPLEARAMGATVAGVRLWSLYVPNGR 120

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACF 175
            +    Y  K+ W++         L  +        GD+N+ P   D ++P ++E     
Sbjct: 121 ALDDPHYSYKLEWLQALAADTRAWLAADPATPLALMGDWNVAPLDTDVWDPALFEGKTHT 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
           +   R +F    + G  D +R +      Y++WDY    + +N+G+RID I+ +   + L
Sbjct: 181 SEPERAAFAAFLDAGLADVVRPSIP--EGYTYWDYQQLRFPRNEGMRIDFILGNDRFSEL 238

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQD 272
           + + RI    R    PSDH PV V LD+       + 
Sbjct: 239 VGAPRIHRDERKGDGPSDHVPVAVDLDVETELDDDRP 275


>gi|257413807|ref|ZP_04744296.2| exodeoxyribonuclease III [Roseburia intestinalis L1-82]
 gi|257202214|gb|EEV00499.1| exodeoxyribonuclease III [Roseburia intestinalis L1-82]
 gi|291538795|emb|CBL11906.1| exodeoxyribonuclease III [Roseburia intestinalis XB6B4]
          Length = 256

 Score =  188 bits (477), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 69/265 (26%), Positives = 117/265 (44%), Gaps = 13/265 (4%)

Query: 2   SVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           + + + +WNVN +RA I      +  E + DI C+QE+K ++       L     +    
Sbjct: 3   NTMKLISWNVNGLRACIQKGFLDFFHETDADIFCIQESKLQEGQIDL-PLPGYFSYWNYA 61

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+G AI +K +P+ +   +  ++ D + R I   +                 +   
Sbjct: 62  KKKGYSGTAIFTKKEPLNVTYGIGIEEHDKEGRVITLEYPDFYM-----VTCYTPNSQNE 116

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   ++ W   F  +  + L+  +P+I  GD N+  +  D  NP     +A F+ E R
Sbjct: 117 LARLPYRMQWEDDFRAYLKR-LDGSKPVILCGDLNVAHEEIDLKNPKTNRKNAGFSDEER 175

Query: 181 QSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           +   KL + GFTD  R  +     +YS+W Y   +  KN G RID+ + S      L  A
Sbjct: 176 EKMTKLLDAGFTDTFRYFYPDTEQIYSWWSYRFRAREKNAGWRIDYFITSKRMNDKLTGA 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIP 264
           +I T   G    SDH PV + +D+ 
Sbjct: 236 KIHTDVFG----SDHCPVELDIDLS 256


>gi|203284438|ref|YP_002222178.1| exodeoxyribonuclease III [Borrelia duttonii Ly]
 gi|201083881|gb|ACH93472.1| exodeoxyribonuclease III [Borrelia duttonii Ly]
          Length = 254

 Score =  188 bits (476), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 63/261 (24%), Positives = 101/261 (38%), Gaps = 9/261 (3%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++ + +WNVN IRA        +I E +PDI+CLQETK   +  P E +    Y+     
Sbjct: 1   MMNLISWNVNGIRAVSNKGFLNFIAEYSPDILCLQETKALKEQLPRELIDIEGYYSYFSK 60

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
                   +    +   I       ++  +    E    I      I        +    
Sbjct: 61  SIIKGYSGVAIYSKIEPIKLENMNIEIFDR----EGRCIIAHYHDFILINAYFPNSQSLR 116

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            + + K+ ++      A+  +   + LI  GD+NI     D  NP      A F +E   
Sbjct: 117 KRLNYKLEFLMSLESIANSFVTSGKNLIVCGDFNIAHTEIDLSNPKTSRESAGFYVEETN 176

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
                 N G+ D  R  +     Y++WDY   +  +N G RID+ +++    S +  A I
Sbjct: 177 WMDNFLNRGYVDTFRMFNKEPGNYTWWDYKTRARERNVGWRIDYFVINKAFQSKVKDALI 236

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
             K  G    SDH PV + L 
Sbjct: 237 LNKVMG----SDHCPVFLKLK 253


>gi|300726843|ref|ZP_07060273.1| exodeoxyribonuclease III [Prevotella bryantii B14]
 gi|299775956|gb|EFI72536.1| exodeoxyribonuclease III [Prevotella bryantii B14]
          Length = 250

 Score =  188 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 65/261 (24%), Positives = 110/261 (42%), Gaps = 12/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +        K  + D  C+QETK ++     +             +
Sbjct: 1   MKLISWNVNGLRACVTKGFKETFKSFDADFFCIQETKMQEGQLDLQ-FDGYESFWNYADK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +P+ +   +  DD + + R I   +                   +   
Sbjct: 60  KGYSGTAIYAKTKPLNVTYGIDIDDHNHEGRVITLEYDNFFLVTVYTPNSQNELKRLNYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    ++  +    +L+  +P+I  GD N+  Q  D  NP      A FT E R+ 
Sbjct: 120 M------IWEKDFQTYLHKLDKRKPIIVCGDMNVAHQEIDIKNPKTNHKSAGFTDEEREK 173

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
             +L + GFTD  R  +     YS+W Y   +  KN G RID+ ++S      +  A+I 
Sbjct: 174 MTQLLSNGFTDTFRFKYPEQITYSWWSYRFRAREKNAGWRIDYFLVSDRIKEKVLDAKIH 233

Query: 243 TKPRGWTKPSDHTPVIVSLDI 263
           T   G    SDH PV +++++
Sbjct: 234 TDIMG----SDHCPVELTIEL 250


>gi|253574957|ref|ZP_04852296.1| exodeoxyribonuclease III [Paenibacillus sp. oral taxon 786 str.
           D14]
 gi|251845413|gb|EES73422.1| exodeoxyribonuclease III [Paenibacillus sp. oral taxon 786 str.
           D14]
          Length = 251

 Score =  188 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 67/262 (25%), Positives = 111/262 (42%), Gaps = 13/262 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      + KE + DI CLQETK ++     +       +     +
Sbjct: 1   MKLVSWNVNGLRACVGKGFLDYFKEADADIFCLQETKLQEGQIELDLGSEYEQYWNYAEK 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G A+ ++ +P+ +   +  D                  T+   N           +
Sbjct: 61  KGYSGTAVFTRIKPLSVRYGMEEDYEPEGRIITLEFEQFYLVTVYTPNA------KRDLS 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           + D ++ W  RF  +    L+  +P+I  GD N+   P D  N    E ++ +TLE R  
Sbjct: 115 RLDYRMEWEDRFRTY-LTGLDAVKPVIVCGDLNVAHNPIDIKNAKSNEGNSGYTLEERGK 173

Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             +L   GF D  R  +     +YS+W Y      +N G RID+ + S      L  A I
Sbjct: 174 MTELLASGFIDTFRHFYPDREGVYSWWSYMPKIRERNIGWRIDYFLASSRLAPKLQDAGI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
           D    G    SDH PV ++++ 
Sbjct: 234 DCHILG----SDHCPVSLTVEW 251


>gi|300771561|ref|ZP_07081436.1| exodeoxyribonuclease III [Sphingobacterium spiritivorum ATCC 33861]
 gi|300761550|gb|EFK58371.1| exodeoxyribonuclease III [Sphingobacterium spiritivorum ATCC 33861]
          Length = 255

 Score =  188 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 74/262 (28%), Positives = 117/262 (44%), Gaps = 13/262 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPF-ETLQSLNY--HIET 59
           + + T+NVN +RA +      W+K  N D+ICLQE K      P    L+ L Y  +   
Sbjct: 1   MKIITYNVNGLRAALKKGWLDWLKSTNADVICLQEIKATPDLIPEIALLEQLGYEHYWYP 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G AI +K  P  +      +  D + R I A F   +                
Sbjct: 61  AQKKGYSGTAIFTKVSPKRVEYGCGHELYDFEGRIIRADFEKFSVMST-----YFPSGTT 115

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
             T+   K  ++  F +++ + L+    LI  GDYNI  +  D +NP    N + F  E 
Sbjct: 116 GETRQTFKYQFLDDFQQYSDRLLKDIPNLIVCGDYNICHRAIDIHNPKSNANTSGFLPEE 175

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R+  +   N G+ D+ R  +   H YS+W Y A + ++N G RID+ M+S    S +  +
Sbjct: 176 REWMENFINSGYVDSFRHLNPEPHQYSWWSYRAGARARNLGWRIDYNMVSAPLASQIEKS 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261
            +          SDH PV+V +
Sbjct: 236 YLLNDA----VHSDHCPVVVEI 253


>gi|254384957|ref|ZP_05000292.1| exodeoxyribonuclease [Streptomyces sp. Mg1]
 gi|194343837|gb|EDX24803.1| exodeoxyribonuclease [Streptomyces sp. Mg1]
          Length = 268

 Score =  188 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 58/265 (21%), Positives = 101/265 (38%), Gaps = 6/265 (2%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IET 59
           ++TV + NVN IRA        W+  ++ D++CLQE + E+   P E      +H     
Sbjct: 2   MLTVTSVNVNGIRAAAKKGFVPWLAGSDADVVCLQEVRAEEAQIPDEARVPEGWHTVFAP 61

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
              K   GVA+ ++ +P  +      ++ D   R++E      T    +       G   
Sbjct: 62  AAAKGRAGVAVYTRREPERVRVGFGSEEFDTSGRYLEVDLPGVTVA-SLYLPSGEAGTEK 120

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              KY     ++        +       ++  GD+NI  +  D  N      +A F  E 
Sbjct: 121 QDEKYRFMGEFLTYLEGLRERAAAEGREVVVCGDWNICHREADLKNWKTNRKNAGFLPEE 180

Query: 180 RQSFQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
           R    ++ +             DT   YS+W Y   ++  + G RID  + +P   +   
Sbjct: 181 RAWLGEVYDRAGYVDVVRALHPDTEGPYSWWSYRGRAFDNDAGWRIDLQVATPGLAARAV 240

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLD 262
            A ++       + SDH PV V  +
Sbjct: 241 KAFVERAETHPERWSDHAPVTVVYE 265


>gi|331092367|ref|ZP_08341193.1| exodeoxyribonuclease [Lachnospiraceae bacterium 2_1_46FAA]
 gi|330401391|gb|EGG80977.1| exodeoxyribonuclease [Lachnospiraceae bacterium 2_1_46FAA]
          Length = 250

 Score =  188 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 74/261 (28%), Positives = 123/261 (47%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN IRA +      +  + + DI C+QE+K ++     E L+  + +     +
Sbjct: 1   MKLISWNVNGIRACVQKGFLDFFHQADADIFCIQESKMQEGQLQLE-LEGYHQYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G A+ +K +P+ +   +  ++ D + R      T+         +Y P+     + 
Sbjct: 60  KGYSGTAVFTKEEPLSVTYGMGIEEHDKEGRL----ITLEFPEFYFATVYTPNSQNELAR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
             D ++ W   FL +  + LE ++P+IF GD N+  +  D  NP     +A FT E R  
Sbjct: 116 -LDYRMQWETDFLAYMKK-LEEKKPVIFCGDLNVAHREIDLKNPKTNRKNAGFTDEERGK 173

Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L + GF D  R  +     +YS+W Y   +  KN G RID+  +S      L  A+I
Sbjct: 174 FGELLDAGFIDTFRYFYPDMEGIYSWWSYRFRAREKNAGWRIDYFCVSESLRERLADAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            T   G    SDH PV + L 
Sbjct: 234 LTYIFG----SDHCPVELDLK 250


>gi|312198907|ref|YP_004018968.1| exodeoxyribonuclease III Xth [Frankia sp. EuI1c]
 gi|311230243|gb|ADP83098.1| exodeoxyribonuclease III Xth [Frankia sp. EuI1c]
          Length = 305

 Score =  188 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 77/262 (29%), Positives = 123/262 (46%), Gaps = 6/262 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL---NYHIETC 60
           + +ATWN+NS +AR   L  W+    PD++CLQETK +D+ F     + L    Y     
Sbjct: 1   MRIATWNINSAKARQARLIEWLDRAQPDVVCLQETKLDDEAFAENFDEDLFRRGYRYAHH 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           G   +NGVA+LS+    ++     GD    +        T     +R+ +LY+P+G    
Sbjct: 61  GDGRWNGVALLSRAGLDDVARGFAGDPGFPEPEPRAIAATCGG--IRVWSLYVPNGRTPD 118

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
              Y  K+ W+       ++    +  +   GD+NI P   D ++P  +      T   R
Sbjct: 119 DPHYAYKLRWLAALRDTVAEVAAHQPVM-ALGDFNIAPTDADVWDPADFVGATHVTEPER 177

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            + ++L  +G  D +RA      +Y++WDY A  + KN G+RID  +   +    + +  
Sbjct: 178 AALRELTGVGLIDVLRARWPDETVYTYWDYRALCFPKNMGMRIDLTLAGADVAKRVAAVY 237

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           +D   R  T  SDH PVIV LD
Sbjct: 238 VDRAARKGTGTSDHAPVIVDLD 259


>gi|15893514|ref|NP_346863.1| exodeoxyribonuclease (exoA) [Clostridium acetobutylicum ATCC 824]
 gi|15023055|gb|AAK78203.1|AE007535_5 Exodeoxyribonuclease (exoA) [Clostridium acetobutylicum ATCC 824]
 gi|325507632|gb|ADZ19268.1| Exodeoxyribonuclease (exoA) [Clostridium acetobutylicum EA 2018]
          Length = 250

 Score =  188 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 72/261 (27%), Positives = 107/261 (40%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA I      + KE + D+ CLQETK ++     E L           +
Sbjct: 1   MKLISWNVNGLRACITKGFLDYFKEVDADVFCLQETKIQEGQVELE-LPGYYDFWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +PI     +  +  D + R I   F                   +   
Sbjct: 60  KGYSGTAIFTKKKPISYSYGINEEKHDKEGRVITLEFEDFYMVTVYTPNSKEKLARLEYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +   R   + L+ ++P+I  GD N+     D  NP     +A F+ E R  
Sbjct: 120 M------EWEDSFRNYLKALDEKKPVIVCGDMNVAHTEIDLKNPKTNTKNAGFSPEERSK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L   GF D  R  +     +YS+W Y   +  KN G RID+   S      L SA I
Sbjct: 174 FTELLEAGFIDTYRYFYPDKEGIYSWWSYRFKAREKNAGWRIDYFCTSERLKDKLVSADI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            T+  G    SDH PV + + 
Sbjct: 234 HTEVMG----SDHCPVELVIK 250


>gi|284042535|ref|YP_003392875.1| exodeoxyribonuclease III Xth [Conexibacter woesei DSM 14684]
 gi|283946756|gb|ADB49500.1| exodeoxyribonuclease III Xth [Conexibacter woesei DSM 14684]
          Length = 262

 Score =  188 bits (476), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 70/261 (26%), Positives = 121/261 (46%), Gaps = 5/261 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + TWNVNS+R R+  +  ++ E+ PD++CLQETKT+   FP   L +  Y        
Sbjct: 1   MRLVTWNVNSLRVRLPRVLEFLAEHRPDVLCLQETKTDAAAFPHAELAAAGYVAADHSGG 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            + GVAI+++ + + +     G   +                LR+ ++Y+P+G  + S  
Sbjct: 61  RWAGVAIVARTE-LGVADPAVGLPGEPAQDESRWIEATVGGELRVASVYVPNGRELESEW 119

Query: 124 Y----DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
           Y    +   +  +R             PL+ AGD N+ P   D Y+P ++      +   
Sbjct: 120 YAAKLEFLDAMARRVGELRGDDAGAPLPLVVAGDMNVAPSDLDVYDPAVFATSTHTSAAE 179

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R + + ++  G  DA R  H     Y++WDY    + +  G+RID I+ SP+    L   
Sbjct: 180 RTALRAVEQAGLLDAYRQLHPDDVGYTWWDYRQGHFHRGLGLRIDLILASPDLAERLTRV 239

Query: 240 RIDTKPRGWTKPSDHTPVIVS 260
            I+   R  ++PSDH P++  
Sbjct: 240 GIERDYRKGSRPSDHVPLVAD 260


>gi|238018561|ref|ZP_04598987.1| hypothetical protein VEIDISOL_00388 [Veillonella dispar ATCC 17748]
 gi|237865032|gb|EEP66322.1| hypothetical protein VEIDISOL_00388 [Veillonella dispar ATCC 17748]
          Length = 251

 Score =  187 bits (475), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 68/262 (25%), Positives = 115/262 (43%), Gaps = 13/262 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +         E + DI CLQETK +      E L     +  +  +
Sbjct: 1   MKLISWNVNGLRAAVTKGFMESFNELDADIFCLQETKLQPDQISLE-LPGYEQYWNSAVK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G A+ ++ +P+ +   +  ++ D + R I A +        +   Y P+     + 
Sbjct: 60  KGYSGTAVFTRIKPLSVTNGIGIEEHDQEGRVITAEYD----NFYLVCCYTPNSQRELAR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
              +     +   R     L+ ++P+I  GD N+  Q  D  NP     +A F+ E R  
Sbjct: 116 L--EYRMAWEDAFRNYLLELDKKKPVILCGDLNVAHQEIDLKNPKTNRKNAGFSDEERAK 173

Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             +L   GFTD  R  +      YS+W Y   +  +N G RID+ + S      +  A+I
Sbjct: 174 MTELLGAGFTDTFRHLYPDAIEEYSWWSYMGKARERNTGWRIDYFITSKRLDDKIQEAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
             +  G    SDH PV + +D+
Sbjct: 234 HQQIFG----SDHCPVELDIDL 251


>gi|312878938|ref|ZP_07738738.1| exodeoxyribonuclease III Xth [Aminomonas paucivorans DSM 12260]
 gi|310782229|gb|EFQ22627.1| exodeoxyribonuclease III Xth [Aminomonas paucivorans DSM 12260]
          Length = 261

 Score =  187 bits (475), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 81/259 (31%), Positives = 132/259 (50%), Gaps = 4/259 (1%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           MS+  VA++NVNS++ R+  L  W+ E+  D++CLQETK +D +FP    + L YH+   
Sbjct: 1   MSIFKVASFNVNSVKTRLPILERWLGEDPVDVLCLQETKVQDPDFPVSAFRDLGYHVAFR 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           G KSYNGVA+ S+ +P E+       +       +     +    L + N Y+P G  + 
Sbjct: 61  GMKSYNGVAVASREEPDEVAFGFGDGEEPDDGPRVA---RVRFGDLTVLNTYVPQGKALE 117

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
              +  K+ + +R L    +     +P+++ GD N+ P   D  +P    +  CF  +V+
Sbjct: 118 HPDFLYKLRFFERVLALLERHCREADPVLWTGDLNVAPTDRDVTHPENKRDHVCFHRDVQ 177

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYY-ADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           ++F+ + + G  D  R        +SFWDY   DS ++N G RIDH++ SP        A
Sbjct: 178 RAFRDVLSWGLEDVYRKHRPGDGEFSFWDYRVRDSLARNIGWRIDHLLASPPLAERSVDA 237

Query: 240 RIDTKPRGWTKPSDHTPVI 258
               + R   +PSDHT V+
Sbjct: 238 YAVRELRAQERPSDHTAVV 256


>gi|254786174|ref|YP_003073603.1| exonuclease III [Teredinibacter turnerae T7901]
 gi|237686598|gb|ACR13862.1| exodeoxyribonuclease III [Teredinibacter turnerae T7901]
          Length = 273

 Score =  187 bits (475), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 92/271 (33%), Positives = 136/271 (50%), Gaps = 11/271 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +T  ++NVNSIR R+H L A +++ NPD I LQETK  D+NFP E ++ L YH+E  GQK
Sbjct: 3   ITCVSFNVNSIRTRLHQLEAVVEKYNPDFIGLQETKVADENFPREDIERLGYHVEFLGQK 62

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI-NTQTLRIGNLYLPHGNPITST 122
           ++ GVA++SK+  + +      D  D Q RFI   F I   + L + N Y P G   T  
Sbjct: 63  THYGVALMSKHPFLSVQKGFATDGEDAQKRFIVGQFEIGADKPLTVMNGYFPQGESNTHP 122

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175
            K+ +K ++        + +   E+ LI  GD NI PQ        D     +      F
Sbjct: 123 VKFPNKRNFYSDLQSLLTGQYSPEDNLIVMGDMNISPQDIDIGIGEDNRKRWLRSGKCSF 182

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKN--KGIRIDHIMLSPEA 232
             E R+   +L   G  D +R        LYS++DY +  + +   +G+RID I+ + + 
Sbjct: 183 LPEEREWLDRLLCWGLHDTLRKLQPEADDLYSWFDYRSRGYEREPRRGLRIDLILATQQL 242

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                +A ID + RG  KPSDH P+     I
Sbjct: 243 VEKCSNAGIDLEIRGMEKPSDHCPIWAEFSI 273


>gi|326778748|ref|ZP_08238013.1| exodeoxyribonuclease III Xth [Streptomyces cf. griseus XylebKG-1]
 gi|326659081|gb|EGE43927.1| exodeoxyribonuclease III Xth [Streptomyces cf. griseus XylebKG-1]
          Length = 271

 Score =  187 bits (475), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 58/270 (21%), Positives = 101/270 (37%), Gaps = 10/270 (3%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++TV + NVN +RA        W+   + D++CLQE + E    P E      +H     
Sbjct: 1   MLTVTSVNVNGLRAAAKKGFVEWLAGTDADVVCLQEVRAELAQLPEEVGAPEGWHTVHAP 60

Query: 62  Q--KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIE--ATFTINTQTLRIGNLYLPHGN 117
              K   GV++ S+  P        G  +     F        I+   + + +LYLP G 
Sbjct: 61  AAAKGRAGVSLYSRQAPERTQIGFGGFGVPGAEEFDASGRYAEIDLPGVTVASLYLPSGE 120

Query: 118 PITSTKYD---DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
             T  + +      +++       ++       ++  GD+NI  +  D  N       + 
Sbjct: 121 VGTERQDEKERFMAAFLPYLQGLKARAAADGREVVVCGDWNIAHREADLKNWKANRKSSG 180

Query: 175 FTLEVRQSFQKLQNMGFTDAIRA--THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
           F  E R    ++        +      D    YS+W Y   ++  + G RID+ M +P  
Sbjct: 181 FLPEERAWLTRVLEEAAYVDVVRALHPDVEGPYSWWSYRGRAFDNDSGWRIDYQMATPGL 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
                 A ++       + SDH PV V  +
Sbjct: 241 AGRAVKAWVERAATHGERWSDHAPVTVVYE 270


>gi|124010283|ref|ZP_01694936.1| exodeoxyribonuclease III [Microscilla marina ATCC 23134]
 gi|123983668|gb|EAY24108.1| exodeoxyribonuclease III [Microscilla marina ATCC 23134]
          Length = 259

 Score =  187 bits (475), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 71/263 (26%), Positives = 121/263 (46%), Gaps = 8/263 (3%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + ++NVN IRA I   L  W+K  + D++C+QE K  ++      L++L YH+     
Sbjct: 1   MKIISYNVNGIRAAIRKGLVEWLKAADCDVLCIQELKALEEQVDTAELEALGYHLYWQPA 60

Query: 62  --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GVAI S+ +P  +V      D        +    I         + +   +  
Sbjct: 61  QTRKGYSGVAIFSRIKPNNVVYGYGDYDWHDTRWIDDEGRIIRADYDNFSVMSVYMPSGT 120

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +   K+ W   F ++ ++  ++   LI  GDYNI  Q  D +NP      + F  E 
Sbjct: 121 KPERVVFKMEWNLAFQQYITELKKVVPHLIICGDYNIAHQAIDIHNPKSNAKRSGFLPEE 180

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R        +GFTD+ R  +   H Y++W+   ++ +KN G RID+ M+S      L  A
Sbjct: 181 RNWLTDFMELGFTDSFRYLNPEPHNYTWWNVRTNARAKNLGWRIDYQMISKSLNENLKRA 240

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
            I ++       SDH P+++ +D
Sbjct: 241 VILSEAM----HSDHCPILIEVD 259


>gi|223985143|ref|ZP_03635238.1| hypothetical protein HOLDEFILI_02544 [Holdemania filiformis DSM
           12042]
 gi|223962889|gb|EEF67306.1| hypothetical protein HOLDEFILI_02544 [Holdemania filiformis DSM
           12042]
          Length = 252

 Score =  187 bits (475), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 60/260 (23%), Positives = 107/260 (41%), Gaps = 10/260 (3%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA I      +  E + DI  LQETK +      E L   + +  +  +
Sbjct: 1   MKLISWNVNGLRACIQKGFMDFFNEQDADIFALQETKLQPHQIELE-LPGYHQYWHSAER 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G A+ +K +P+ +       + +        T            +           
Sbjct: 60  KGYSGTAVFTKQKPLSVRYDFDEAEGEHPKEGRVITLEFEQFYFVTAYVPNSKEELARLD 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +  +     +L   +P+++ GD N+  +  D  NP     +  F+ + RQ 
Sbjct: 120 Y----RMQWEDAMARHLAKLNETKPVVYTGDLNVAVEEIDLKNPKTNHFNPGFSDQERQK 175

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
            + L ++GF D  R  +     YS+W Y  +S +KN G RID+ ++S    + +  + I 
Sbjct: 176 MRDLLSLGFADTFRTLYPEKVEYSWWSYRFNSRAKNVGWRIDYFIVSQRLMNQVKDSVIY 235

Query: 243 TKPRGWTKPSDHTPVIVSLD 262
               G    SDH PV V ++
Sbjct: 236 GDILG----SDHCPVGVEIE 251


>gi|307719602|ref|YP_003875134.1| hypothetical protein STHERM_c19260 [Spirochaeta thermophila DSM
           6192]
 gi|306533327|gb|ADN02861.1| hypothetical protein STHERM_c19260 [Spirochaeta thermophila DSM
           6192]
          Length = 256

 Score =  187 bits (475), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 65/264 (24%), Positives = 108/264 (40%), Gaps = 13/264 (4%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC- 60
           +++V +WNVN IRA     L  WI++  P+I+CLQETK      P E  +   YH     
Sbjct: 1   MISVYSWNVNGIRAAAKKGLLEWIEKERPEILCLQETKARKDQLPSELARPDGYHTYWAE 60

Query: 61  -GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +  Y+GVA+ + ++P  +        L V     E    I      +        +  
Sbjct: 61  ADKPGYSGVALFTLHEPASVE------PLGVDEFDREGRTLIADFRSFVLFDCYFPNSQE 114

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              + D K+++       A   +     ++ +GD+NI   P D   P   E +  +  E 
Sbjct: 115 AGARLDYKLAYCNAVKERADAYVAAGRHVLISGDFNIAHTPLDLARPEANEKNPGYLPEE 174

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R+      + G+ D  R        Y++W Y   +  K+ G RID+  +       +  +
Sbjct: 175 REWMTYFLSSGYVDTFRMFTKEGGHYTWWTYRFKAREKDIGWRIDYHCVDERFKDKVKES 234

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
            I     G    SDH PV ++LD+
Sbjct: 235 VILKDVMG----SDHCPVKITLDV 254


>gi|51473856|ref|YP_067613.1| exonuclease III [Rickettsia typhi str. Wilmington]
 gi|51460168|gb|AAU04131.1| E.coli exonuclease III [Rickettsia typhi str. Wilmington]
          Length = 270

 Score =  187 bits (475), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 93/258 (36%), Positives = 140/258 (54%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+NSI+ R++ L  ++ + N DI+ LQE K E + FPF+ L  L YH    GQK
Sbjct: 1   MKIATWNINSIKTRLNLLRNFLSKENLDILLLQEIKCETEKFPFDELSDLPYHFYVHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           SYNGVAI+SK+   +I+     +    QARFIE   +++     I +LY P+G+ ++S K
Sbjct: 61  SYNGVAIISKFPADKIIKDFQNNYCSDQARFIEIKLSLSIGYSNIISLYAPNGSFVSSNK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           + +K+ +   F+ + S +    E  I  GD+NI P   D Y+  +     C T   ++  
Sbjct: 121 FVEKLKFYDNFINYLSTKKSCYEKTIIGGDFNIAPFDIDVYSSKVLTETTCCTKVEQKKL 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + + N GF D  R  H     +S+WDY A  + KNKG+RID I+        L    +D 
Sbjct: 181 RTILNSGFEDLYRLMHPNKQEFSWWDYRAGCFEKNKGMRIDMILGCNNTIDYLEKCYMDY 240

Query: 244 KPRGWTKPSDHTPVIVSL 261
             R   KPSDH P+I + 
Sbjct: 241 NFRTQKKPSDHIPIIANF 258


>gi|321313648|ref|YP_004205935.1| apurinic/apyrimidinic endonuclease [Bacillus subtilis BSn5]
 gi|320019922|gb|ADV94908.1| apurinic/apyrimidinic endonuclease [Bacillus subtilis BSn5]
          Length = 252

 Score =  187 bits (475), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 74/265 (27%), Positives = 121/265 (45%), Gaps = 18/265 (6%)

Query: 4   VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + +WNVN +RA +      +++KE + DIICLQETK +D       LQ   YH+    
Sbjct: 1   MKLISWNVNGLRAVMRKMDFLSYLKEEDADIICLQETKIQDGQVD---LQPEGYHVYWNY 57

Query: 62  --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G A+ SK +P++++  +  ++ D + R I   F                   I
Sbjct: 58  AVKKGYSGTAVFSKQEPLQVIYGIGVEEHDQEGRVITLEFENVFVMTVYTPNSRRGLERI 117

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                       +  L      L+ ++P+I  GD N+  Q  D  NP    N+A F+ + 
Sbjct: 118 DYRMQ------WEEALLSYILELDQKKPVILCGDLNVAHQEIDLKNPKANRNNAGFSDQE 171

Query: 180 RQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R++F +    GF D+ R  +      YS+W Y A +  +N G RID+ ++S      +  
Sbjct: 172 REAFTRFLEAGFVDSFRHVYPDLEGAYSWWSYRAGARDRNIGWRIDYFVVSESLKEQIED 231

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263
           A I     G    SDH PV + ++I
Sbjct: 232 ASISADVMG----SDHCPVELIINI 252


>gi|153871651|ref|ZP_02000768.1| Endonuclease/exonuclease/phosphatase [Beggiatoa sp. PS]
 gi|152071885|gb|EDN69234.1| Endonuclease/exonuclease/phosphatase [Beggiatoa sp. PS]
          Length = 257

 Score =  187 bits (475), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 68/263 (25%), Positives = 120/263 (45%), Gaps = 13/263 (4%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + T N+N IRA        W+ E   D++C+QETK ++            YH      
Sbjct: 1   MRIITVNLNGIRAAAKKGFFDWLVEQGADVVCIQETKAQEHQLTDSQFHPAGYHCYYHDA 60

Query: 62  -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GVA+ ++ +P E++  +   D+D + R++EA F                     
Sbjct: 61  EKKGYSGVALYARQEPQEVIKGIGWTDIDSEGRYLEARFPHVNI-----VSLYLPSGTSG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
           + + + K+S+++RF+ +  +     +  I  GD+NI  +  D  N    +N + F  E R
Sbjct: 116 THRQEIKVSFMERFMPYLRELQASPKEYILCGDWNIAHKQIDLKNWRSNQNHSGFLPEER 175

Query: 181 QSFQKLQN-MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
               +L   + F DA R  +     Y++W +   +W  N G RID+ +++P  T  + SA
Sbjct: 176 AWMDELFGPVRFADAFRVINQESEQYTWWSHRGRAWDNNTGWRIDYQVITPGLTEKVKSA 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
            I  + R     SDH P+ V  +
Sbjct: 236 SIYKEKR----FSDHAPLTVDYE 254


>gi|72161943|ref|YP_289600.1| AP endonuclease [Thermobifida fusca YX]
 gi|71915675|gb|AAZ55577.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth
           [Thermobifida fusca YX]
          Length = 267

 Score =  187 bits (475), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 63/266 (23%), Positives = 104/266 (39%), Gaps = 6/266 (2%)

Query: 1   MSVVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE- 58
           MS + +AT NVN +RA        W+     D++CLQET+ E    P E  +   +H+  
Sbjct: 1   MSSLVIATVNVNGLRAAARKGFVEWLAGTKADVVCLQETRAELDQLPPEVAEPDGWHVVL 60

Query: 59  -TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
                K   GVA+ S+ +P  +       +     R++EA F   +    +       G 
Sbjct: 61  VPAATKGRAGVAVYSRMKPDAVRIGFGSAEFADSGRYVEADFGPVSVA-SLYLPSGQVGT 119

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
           P+   K      ++   +R  ++       L   GD+NI  Q  D  N      ++ F  
Sbjct: 120 PLQEEKERFMAEFLPYLVRRRTEVEAQGRELAVCGDWNIAHQEADLKNWRGNRKNSGFLP 179

Query: 178 EVRQSFQKLQNM--GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
           E RQ   ++               D    Y++W Y   ++  + G RID  + +P   + 
Sbjct: 180 EERQWLSRVYEEAGYVDVVRALHPDQDGPYTWWSYRGRAFDNDAGWRIDLQVATPGLAAR 239

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
              A ++  P    + SDH PV V  
Sbjct: 240 AQEAWVERAPSHDQRWSDHAPVTVVY 265


>gi|78047637|ref|YP_363812.1| exodeoxyribonuclease III [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|325927635|ref|ZP_08188864.1| Exodeoxyribonuclease III [Xanthomonas perforans 91-118]
 gi|78036067|emb|CAJ23758.1| exodeoxyribonuclease III [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|325542002|gb|EGD13515.1| Exodeoxyribonuclease III [Xanthomonas perforans 91-118]
          Length = 331

 Score =  187 bits (475), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 83/255 (32%), Positives = 137/255 (53%), Gaps = 3/255 (1%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64
            +AT+NVN I +R+ +L  W++   PDI+ LQE K+    FP + ++   Y +   G+KS
Sbjct: 7   KIATFNVNGIASRLPHLLEWLQREQPDIVGLQELKSTQAAFPEQAIRDAGYGVIWQGEKS 66

Query: 65  YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124
           +NGVA+L++      +      D                  + +  LYLP+GNP    K+
Sbjct: 67  WNGVALLARGTEPVEIRRGLPWDPRDTQS---RYLEAAIHGVVVACLYLPNGNPQPGPKF 123

Query: 125 DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ 184
           D K++W +R +R A   ++L  P+   GD+N++P   D Y+P  W  DA    E R+++Q
Sbjct: 124 DYKLAWFERLIRHAKTLVDLPHPVALIGDFNVVPTDADIYDPKGWRKDALLQPESREAYQ 183

Query: 185 KLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK 244
            L   G+TD++ A H    +Y+FWDY+   +++++G+RIDH++L+      L  A +D  
Sbjct: 184 TLLAQGWTDSLLAIHGHTPIYTFWDYFRQHFARDRGLRIDHLLLNRTLAPDLQDAGVDKW 243

Query: 245 PRGWTKPSDHTPVIV 259
            R   K SDH P  +
Sbjct: 244 VRALEKASDHAPTWI 258


>gi|291486726|dbj|BAI87801.1| multifunctional DNA-repair enzyme [Bacillus subtilis subsp. natto
           BEST195]
          Length = 252

 Score =  187 bits (475), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 75/265 (28%), Positives = 123/265 (46%), Gaps = 18/265 (6%)

Query: 4   VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + +WNVN +RA +      +++KE + DIICLQETK +D       LQ   YH+    
Sbjct: 1   MKLISWNVNGLRAVMRKMDFLSYLKEEDADIICLQETKIQDGQVD---LQPEGYHVYWNY 57

Query: 62  --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G A+ SK +P++++  +  ++ D + R I   F        I          +
Sbjct: 58  AVKKGYSGTAVFSKQEPLQVIYGIGLEEHDQEGRVITLEFE---NVFVITVYTPNSRRGL 114

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
               Y       +  L      L+ ++P+I  GD N+  Q  D  NP    N+A F+ + 
Sbjct: 115 ERIDYR---MQWEEALLSYILELDQKKPVILCGDLNVAHQEIDLKNPKANRNNAGFSDQE 171

Query: 180 RQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R++F +    GF D+ R  +      YS+W Y A +  +N G RID+ ++S      +  
Sbjct: 172 REAFTRFLEAGFVDSFRHVYPDLEGAYSWWSYRAGARDRNIGWRIDYFVVSERLKEQIED 231

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263
           A I     G    SDH PV + ++I
Sbjct: 232 ASISADVMG----SDHCPVELIINI 252


>gi|89889637|ref|ZP_01201148.1| exodeoxyribonuclease III [Flavobacteria bacterium BBFL7]
 gi|89517910|gb|EAS20566.1| exodeoxyribonuclease III [Flavobacteria bacterium BBFL7]
          Length = 253

 Score =  187 bits (475), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 76/263 (28%), Positives = 121/263 (46%), Gaps = 14/263 (5%)

Query: 4   VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + ++NVN IRA +      W+K  NPD++CLQE K  +     E  +   Y  +    
Sbjct: 1   MKIISYNVNGIRAAMKKDFITWLKAANPDVLCLQEIKATEDQVDTEAFKEAGYAYQYYYS 60

Query: 63  KS---YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
                Y+GVAI+SK +P  +      + +D + R +   F      + I ++YLP G   
Sbjct: 61  AQKKGYSGVAIISKTKPDHVEYGTGIESMDFEGRNLRVDFG----DVSIMSMYLPSGTND 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
               +  K      FL ++ +  +    LI  GDYNI  +  D +NP   ++ + F  E 
Sbjct: 117 DRLSFKFKYME--EFLEYSKELRKERPNLIVCGDYNICHKAIDIHNPKGLKSTSGFLPEE 174

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R+   +    GF D  R  +D    YS+W Y   S ++NKG R+D+ M + + T  +  A
Sbjct: 175 REWMDRFVASGFIDTFRMFNDQPDQYSWWSYRGGSRARNKGWRLDYHMATEQMTDRIKRA 234

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
            I          SDH PV+V +D
Sbjct: 235 VILQSA----VHSDHCPVVVEID 253


>gi|332044711|gb|EGI80905.1| exodeoxyribonuclease III Xth [Lacinutrix algicola 5H-3-7-4]
          Length = 253

 Score =  187 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 70/264 (26%), Positives = 124/264 (46%), Gaps = 15/264 (5%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + ++NVN IRA +      W++  NPD++CLQE K        E  ++L Y       
Sbjct: 1   MKIISYNVNGIRAALKKGFIEWLEGANPDVLCLQEIKAMQDQVDVEAFEALGYKYHYWFS 60

Query: 62  --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GVAILSK +P  +      + +D + R I A F        +  + +   +  
Sbjct: 61  ANKKGYSGVAILSKIKPNHVEFGTGIETMDFEGRNIRADFDG------VSVMSMYLPSGT 114

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              + + K++++     + ++  E    L+  GDYNI  +  D +NP   +N + F    
Sbjct: 115 NMDRLEFKLNYMDEIQDYVNKLRETIPNLVICGDYNICHEAIDIHNPK-MKNVSGFLPVE 173

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R+      + G  D+ R  +     YS+W Y A++ + NKG R+D+ M++      +  A
Sbjct: 174 REWIGNFIDSGLVDSYRYLNPEKVEYSWWSYRANARANNKGWRLDYAMVTQPLKQKIKRA 233

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
            I T+       SDH P+++ LD+
Sbjct: 234 VILTQA----VHSDHCPILLELDM 253


>gi|319935137|ref|ZP_08009577.1| exodeoxyribonuclease III [Coprobacillus sp. 29_1]
 gi|319809962|gb|EFW06345.1| exodeoxyribonuclease III [Coprobacillus sp. 29_1]
          Length = 252

 Score =  187 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 68/260 (26%), Positives = 113/260 (43%), Gaps = 12/260 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +      + K+ + DI  +QETK +      E  +    +     +
Sbjct: 1   MLFVSWNVNGLRACLKKGFEDFFKDVDADIFAIQETKLQRNQIDLE-FEGYTSYYNDAIK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+GVAI +K +P+ ++  +  ++ D + R I   F                   +   
Sbjct: 60  KGYSGVAIYTKKEPMNVIYGMGIEEHDQEGRLITLEFEKFYFVAVYTPNSKRELERLDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +        +   R   Q+L+  +P++  GD N+     D  N      +A FT + R  
Sbjct: 120 Q------VWEDAFRQHVQKLKESKPVVLCGDLNVAHNEIDLKNDKTNHKNAGFTDQERAK 173

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F +L N GF D  R  +    +YS+W Y   +  KN G RID+ ++S +    +  A I 
Sbjct: 174 FSELLNSGFIDTFRYKYPETEMYSWWSYMFKAREKNAGWRIDYFVVSEDLKENIKDAYIY 233

Query: 243 TKPRGWTKPSDHTPVIVSLD 262
           T+  G    SDH PV V L+
Sbjct: 234 TEIMG----SDHCPVGVELE 249


>gi|295099755|emb|CBK88844.1| exodeoxyribonuclease III [Eubacterium cylindroides T2-87]
          Length = 249

 Score =  187 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 66/261 (25%), Positives = 113/261 (43%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN IRA +       +   + DI C+QETK +      +    L  +I +  +
Sbjct: 1   MKLISWNVNGIRAVLNKGFIDILNTLDADIFCIQETKAQPDQIEVDCDLYLYQYINSAQR 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G  I SK +P+ +   +   + D + R I   F        +       G+ +   
Sbjct: 61  KGYSGTMIFSKIEPLSVHYGIDIPEHDTEGRVITLEF---DSYYVVTVYTPNSGDGLKRL 117

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +Y  +          +      ++P++  GD N+  +  D  NP     +A FT E R S
Sbjct: 118 EYRMEWDKAFSNYIQSL-----DKPVLLTGDLNVANEEIDIKNPKTNRRNAGFTDEERDS 172

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F+K       D+ R  +     YS+W Y   +  KN G RID+ ++S E    +  ++I 
Sbjct: 173 FKKNLLTILKDSYRTLYPDKVEYSWWSYRFKAREKNAGWRIDYWLVSEELMPKVKDSKIL 232

Query: 243 TKPRGWTKPSDHTPVIVSLDI 263
           T   G    SDH PV + +++
Sbjct: 233 TDIYG----SDHCPVQLEIEL 249


>gi|322434444|ref|YP_004216656.1| exodeoxyribonuclease III Xth [Acidobacterium sp. MP5ACTX9]
 gi|321162171|gb|ADW67876.1| exodeoxyribonuclease III Xth [Acidobacterium sp. MP5ACTX9]
          Length = 247

 Score =  187 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 99/251 (39%), Positives = 142/251 (56%), Gaps = 7/251 (2%)

Query: 12  NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAIL 71
           NSIRAR  ++  W+    PD++ LQE K  +  FP E      YH     QK+YNGVAI+
Sbjct: 2   NSIRARAEHVKRWLAARQPDVLLLQELKGTE--FPAEWFMEQGYHSAAVTQKAYNGVAIV 59

Query: 72  SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWI 131
           S+     + T L GD  D  ARF+EA         R+ N+YLP+GNP+ + K++ K++W+
Sbjct: 60  SRTPLEVVSTTLAGDPEDSHARFLEAMIDGM----RVVNIYLPNGNPVGTPKFEYKLAWM 115

Query: 132 KRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191
            R +      L    P +  GD+N+IP+  DC+ P  W +DA F  E R  ++ +  +G+
Sbjct: 116 DRLMEQMKVWLGDGVPTVIGGDFNVIPEEIDCHKPASWVHDALFQPESRARYRGMLELGY 175

Query: 192 TDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
           TDA R  H      ++FWDY+  ++  N+GIRIDH +L+ E    L S  ID  PRG  K
Sbjct: 176 TDAFRTLHPGLGGQFTFWDYFRQAFESNRGIRIDHFLLTAEMAGRLESCEIDRGPRGEAK 235

Query: 251 PSDHTPVIVSL 261
           PSDHTP++V  
Sbjct: 236 PSDHTPIVVRF 246


>gi|167756678|ref|ZP_02428805.1| hypothetical protein CLORAM_02216 [Clostridium ramosum DSM 1402]
 gi|167702853|gb|EDS17432.1| hypothetical protein CLORAM_02216 [Clostridium ramosum DSM 1402]
          Length = 251

 Score =  187 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 70/262 (26%), Positives = 112/262 (42%), Gaps = 13/262 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN IRA I       +KE+  DI C+QETK ++     E      Y + +  +
Sbjct: 1   MKLVSWNVNGIRACITKGFYDVLKESKADIFCVQETKMQEGQIELEKHGYYTY-MNSAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G  + SK +P+     +  ++ D + R +   +       +   +     N     
Sbjct: 60  KGYSGTLVFSKEKPLNYSYGIGIEEHDHEGRVVTLEYE------KFYLVNCYTPNSQNEL 113

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           K  D     +       + LE  +P+I  GD N+  Q  D  NP     +A F+ E R  
Sbjct: 114 KRLDYRMHWEDDFLAYLKSLEKSKPVILCGDLNVAHQEIDLKNPKTNRKNAGFSDEERAK 173

Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
              L   GF D  R  +     +YS+W Y  ++   N G RID+ ++S      +  A I
Sbjct: 174 MTNLLENGFIDTYRYLYPDQEGVYSWWSYRFNARKNNAGWRIDYFIVSDCLKEGIKEAFI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
            T   G    SDH PV + +D+
Sbjct: 234 CTDILG----SDHCPVGLEIDL 251


>gi|110635562|ref|YP_675770.1| exodeoxyribonuclease III Xth [Mesorhizobium sp. BNC1]
 gi|110286546|gb|ABG64605.1| exodeoxyribonuclease III Xth [Chelativorans sp. BNC1]
          Length = 284

 Score =  187 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 73/264 (27%), Positives = 119/264 (45%), Gaps = 9/264 (3%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQK 63
            VATWN+NS+R R+  +  ++++  PD++CLQETK  D  FP    + + Y H+E  GQK
Sbjct: 22  KVATWNINSVRLRLPLVLRFLEQYQPDVLCLQETKCPDDQFPTAAFRKVGYGHVEIHGQK 81

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            Y+GVA +S+     +             R +     ++ + + + N Y+P G      +
Sbjct: 82  GYHGVATISRLPLEVVERR--SFCGLTDCRHLSTLTNVDGRRVLLHNFYVPAGGDEPDPE 139

Query: 124 YDDKISWIKRF---LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
            + K      F   +R     L+     I  GD N+ P   D ++     N    T    
Sbjct: 140 INPKFRHKLDFLQEMRDIIPTLDANTGSILVGDLNVAPLETDVWSHKQMLNVVSHTPVET 199

Query: 181 QSFQKLQNMGFTDAIRATH--DTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLH 237
           +  + ++  G    +   H      L+++W Y A  WS  N+G R+DH+  S +    L 
Sbjct: 200 EGLESVRKGGGWVDLMRRHIPPEEKLFTWWSYRAKDWSLSNRGRRLDHVWSSDDLAPALS 259

Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261
              +    RGW +PSDH PVI + 
Sbjct: 260 RVDVLRDARGWDRPSDHVPVIAAF 283


>gi|237733965|ref|ZP_04564446.1| conserved hypothetical protein [Mollicutes bacterium D7]
 gi|229383046|gb|EEO33137.1| conserved hypothetical protein [Coprobacillus sp. D7]
          Length = 251

 Score =  187 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 74/262 (28%), Positives = 118/262 (45%), Gaps = 13/262 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN IRA I       +KE+  DI C+QETK ++     E      Y + +  +
Sbjct: 1   MKLVSWNVNGIRACITKGFYDVLKESKADIFCVQETKMQEGQIELEKHGYYTY-MNSAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G  + SK +P+     +  ++ D + R +   +        + N Y P+       
Sbjct: 60  KGYSGTLVFSKEKPLNYSYGIGIEEHDHEGRVVTLEYE----KFYLVNCYTPNSQNELKR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
             D ++ W + FL +    LE  +P+I  GD N+  Q  D  NP     +A F+ E R  
Sbjct: 116 -LDYRMHWEEDFLAYLKS-LEKSKPVILCGDLNVAHQEIDLKNPKTNRKNAGFSDEERAK 173

Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
              L   GF D  R  +     +YS+W Y  ++   N G RID+ ++S      +  A I
Sbjct: 174 MTNLLENGFIDTYRYLYPDQEGVYSWWSYRFNARKNNAGWRIDYFIVSDCLKEGIKEAFI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
            T   G    SDH PV + +D+
Sbjct: 234 CTDILG----SDHCPVGLEIDL 251


>gi|237794818|ref|YP_002862370.1| exodeoxyribonuclease III [Clostridium botulinum Ba4 str. 657]
 gi|229261060|gb|ACQ52093.1| exodeoxyribonuclease III [Clostridium botulinum Ba4 str. 657]
          Length = 253

 Score =  187 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 68/262 (25%), Positives = 116/262 (44%), Gaps = 12/262 (4%)

Query: 4   VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + +WNVN +RA    N   WI E +PDI+C+QETK ++           +Y+      
Sbjct: 1   MRIYSWNVNGLRAVAKKNFIEWIGEESPDILCIQETKLQENQLEHNIKNIDSYYSYFSFA 60

Query: 62  -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GVA  +K +PI +   +  +  D + R +   F        + N+Y P+G    
Sbjct: 61  AKKGYSGVATYTKVKPISVKHSIGIEKFDSEGRILITEFK----DFTLLNIYFPNGQ-RD 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   K+ + +    +  + ++  + L+  GDYN      D  NP   E  + F    R
Sbjct: 116 EERLQYKLDFYEALFNYCDELVKEGKKLVICGDYNTAHNEIDLKNPKANEKTSGFLRIER 175

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
               K+   G+TD  R  +     YS+W Y   +  +N G RID+  +S      + +  
Sbjct: 176 DWLDKIIERGYTDTFRNMNPDKIKYSWWSYRFKARERNAGWRIDYHFVSNNLLDRVENTE 235

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I  +  G    SDH P+++ L 
Sbjct: 236 ILNEVYG----SDHCPIMLELK 253


>gi|160879133|ref|YP_001558101.1| exodeoxyribonuclease III [Clostridium phytofermentans ISDg]
 gi|160427799|gb|ABX41362.1| exodeoxyribonuclease III [Clostridium phytofermentans ISDg]
          Length = 250

 Score =  187 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 68/261 (26%), Positives = 117/261 (44%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN IRA +      + KE + DI C+QE+K +      +  +    +     +
Sbjct: 1   MKLISWNVNGIRACVQKGFCDFFKEVDADIFCIQESKLQAGQIELD-FEGYYQYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +P+++   +  ++ D + R I   F                   ++  
Sbjct: 60  KGYSGTAIFTKKEPLQVTYGMGIEEHDKEGRVITLEFEDFYMVTVYTPNSQNELARLSYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +   R   ++LE  +P++  GD N+  +  D  NP   + +A FT+E R  
Sbjct: 120 M------EWEDEFRRFLKKLEETKPVVVCGDLNVAHKEIDLKNPNTNQMNAGFTIEERTK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L   GF D  R  +     +YS+W Y   +  KN G RID+ + S    S L SA+I
Sbjct: 174 FSELLEAGFIDTFRYFYPDAMDMYSWWSYRFKAREKNTGWRIDYFLASQGLESKLVSAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            ++  G    SDH P+ + + 
Sbjct: 234 HSQILG----SDHCPIELEIK 250


>gi|283769444|ref|ZP_06342342.1| exodeoxyribonuclease III [Bulleidia extructa W1219]
 gi|283103969|gb|EFC05354.1| exodeoxyribonuclease III [Bulleidia extructa W1219]
          Length = 251

 Score =  187 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 63/261 (24%), Positives = 108/261 (41%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFET-LQSLNYHIETCG 61
           +   +WNVN +RA +      + +  + D+  LQETK +      E   +    ++ +  
Sbjct: 1   MKFVSWNVNGLRAVMKKGFKEFFERVDADVFALQETKMQADQITSEMEFEGYYRYMNSAE 60

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G  +  K +PI +   + GD                  T  + N           
Sbjct: 61  RKGYSGTMVYCKEEPISVQYDIEGDTSMEGRVITLEYPNYYFVTAYVPNSKEGLARLG-- 118

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
                     +  LR    RL+  +P+I+ GD N+  +  D  NP     +  F+ E RQ
Sbjct: 119 -----FRMEWEDRLRDHLNRLKEVKPVIYTGDLNVAHEEIDLKNPQSNHKNPGFSDEERQ 173

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
              +L   G+ D+ R  +     YS+W Y A +  +N G RID+ ++S      + +A I
Sbjct: 174 KMTELLADGYIDSFRYLYPKEVKYSWWSYRAAARERNVGWRIDYFIVSENLKEKVKNALI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
           D +     K SDH P+ + +D
Sbjct: 234 DDEV----KGSDHCPIELEMD 250


>gi|160871859|ref|ZP_02061991.1| exodeoxyribonuclease III [Rickettsiella grylli]
 gi|159120658|gb|EDP45996.1| exodeoxyribonuclease III [Rickettsiella grylli]
          Length = 254

 Score =  187 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 73/262 (27%), Positives = 123/262 (46%), Gaps = 12/262 (4%)

Query: 4   VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETL-QSLNYHIETCG 61
           + + + NVN IR A       W+K  + D++CLQETK +          Q    +     
Sbjct: 1   MRIISLNVNGIRSAARKGFFEWLKHQDADVVCLQETKAQKHQLNDSVFIQGYEAYFFDAE 60

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+GVAI S+ +P  + T L     D + R+I+    ++   L I +LY+P G+    
Sbjct: 61  KKGYSGVAIYSRLKPNNVTTGLGWACADKEGRYIQ----LHFSQLSIASLYMPSGS-SGE 115

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180
           ++   K  ++  +L    ++ +     I  GD+NI  +P D  N    + ++ F   E  
Sbjct: 116 SRQRLKFQFLDSYLPILKKQRQQAGDFIICGDWNIAHKPIDLKNWRCNQKNSGFLPQERA 175

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
              Q L  +G+ DA RA +     Y++W +   +W  N G RID+ ++S E  + + SA 
Sbjct: 176 WLTQVLGPIGYVDAFRALNPQPDHYTWWSHRGRAWENNVGWRIDYQIVSKEIKNKIKSAM 235

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I    R     SDH P+I+  +
Sbjct: 236 IYKDQR----FSDHAPLIIDYN 253


>gi|327313318|ref|YP_004328755.1| exodeoxyribonuclease III [Prevotella denticola F0289]
 gi|326944960|gb|AEA20845.1| exodeoxyribonuclease III [Prevotella denticola F0289]
          Length = 249

 Score =  187 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 67/260 (25%), Positives = 110/260 (42%), Gaps = 12/260 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +        K+ + D  CLQETK +              +     +
Sbjct: 1   MKFISWNVNGLRACVGKEFEQQFKDLDADFFCLQETKMQAGQLDLS-FPGYESYWNYADK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K++P+ +   +  D+ D + R I      +   + +       G      
Sbjct: 60  KGYSGTAIFTKHKPLNVTYGIGIDEHDHEGRVITLEMD-DFYLVTVYTPNSQDGLRRLDY 118

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +        +   +    +L+ ++P++  GD N+  Q  D  NP     +A FT E R+ 
Sbjct: 119 R-----MKWEDDFQAYLHKLDEKKPVVVCGDMNVAHQEIDLKNPKTNRKNAGFTDEEREK 173

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
             +L   GF D  R  +     YS+W Y   +  +N G RID+ ++S      L  A+I 
Sbjct: 174 MTQLLGNGFIDTFRTLYPEQVTYSWWSYRFRARERNTGWRIDYFLISERLRDRLEDAKIH 233

Query: 243 TKPRGWTKPSDHTPVIVSLD 262
           T+  G    SDH PV V L 
Sbjct: 234 TEIMG----SDHCPVEVDLK 249


>gi|282858966|ref|ZP_06268104.1| exodeoxyribonuclease III [Prevotella bivia JCVIHMP010]
 gi|282588246|gb|EFB93413.1| exodeoxyribonuclease III [Prevotella bivia JCVIHMP010]
          Length = 249

 Score =  187 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 68/260 (26%), Positives = 108/260 (41%), Gaps = 12/260 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +  N        + D  CLQETK ++             +     +
Sbjct: 1   MKFISWNVNGLRACVGKNFKEDFAALDADFFCLQETKMQEGQLDLS-FPGYESYWNYADK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K++P+ + T +  D+ D + R I                       +   
Sbjct: 60  KGYSGTAIFTKHKPLTVTTGIGIDEHDHEGRVITLEMDDFYLVTVYTPNSQDELKRLAYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
              +              +L+  +P+I  GD N+  +  D  NP    ++A F+ E R+ 
Sbjct: 120 MQWETDFQAY------LHKLDEHKPVIVCGDMNVAHEEIDLKNPKTNHHNAGFSDEEREK 173

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
              L N GFTD  R  +     YS+W Y   +  KN G RID+ ++S      L  A+I 
Sbjct: 174 MTILLNNGFTDTFRYLYPEQVTYSWWSYRFKAREKNTGWRIDYFLISNRLRDRLKDAKIH 233

Query: 243 TKPRGWTKPSDHTPVIVSLD 262
           T+  G    SDH PV ++L 
Sbjct: 234 TEIFG----SDHCPVELTLK 249


>gi|282880102|ref|ZP_06288822.1| exodeoxyribonuclease III [Prevotella timonensis CRIS 5C-B1]
 gi|281305975|gb|EFA98015.1| exodeoxyribonuclease III [Prevotella timonensis CRIS 5C-B1]
          Length = 249

 Score =  187 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 69/260 (26%), Positives = 110/260 (42%), Gaps = 12/260 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +  N     ++ + D  CLQETK ++     +       +     +
Sbjct: 1   MKFISWNVNGLRACVKKNFQESFQQLDADFFCLQETKMQEGQLDLQ-FPGYTSYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K++PI +   L  ++ D + R I                       +   
Sbjct: 60  KGYSGTAIYTKHKPIHVSYGLGIEEHDQEGRVITLEMEDFFLITVYVPNSQDELKRLDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +   R    +L+  +P+I  GD N+  +  D  NP   + +A FT E R  
Sbjct: 120 M------KWEDDFRAYITQLDQIKPVIICGDLNVAHEEIDLKNPKTNKRNAGFTDEERNK 173

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
             +L + GF D  R  +     YS+W Y   +  KN G RID+ ++S      LH A+I 
Sbjct: 174 MTRLLDNGFIDTFRYLYPEQITYSWWSYRFRAREKNAGWRIDYFLISERLKERLHDAKIH 233

Query: 243 TKPRGWTKPSDHTPVIVSLD 262
           T+  G    SDH PV + L 
Sbjct: 234 TEIMG----SDHCPVELELK 249


>gi|260459328|ref|ZP_05807583.1| exodeoxyribonuclease III [Mesorhizobium opportunistum WSM2075]
 gi|259034882|gb|EEW36138.1| exodeoxyribonuclease III [Mesorhizobium opportunistum WSM2075]
          Length = 281

 Score =  187 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 102/266 (38%), Positives = 149/266 (56%), Gaps = 8/266 (3%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
            ++ VAT+NVN +  R+  L  W+ E   DI+CLQE KT D+ FP E +++  Y     G
Sbjct: 20  KMIRVATFNVNGVNGRLPVLLKWLGETQYDIVCLQELKTSDEKFPAEAIRNAGYGAIWHG 79

Query: 62  QKSYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           QKSYNGVAIL++  QP E    LPGD  D  +R+IEA        L +G LYLP+GNP  
Sbjct: 80  QKSYNGVAILARGKQPQERRRGLPGDVDDTHSRYIEADIDG----LVVGCLYLPNGNPAP 135

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             K+D K+ W +R + +    +      +  GDYN++P P D   P  W +DA +  E R
Sbjct: 136 GPKFDYKLRWFERLIDYGRLLIRDSPASVLCGDYNVVPAPIDAAVPARWLSDAVYFPESR 195

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFW--DYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           Q++ ++   G+ DA+R       +Y++W   Y    + ++ G+R+DH+++SP     L  
Sbjct: 196 QAYAEMLAEGWIDAVRLIQPERGVYTYWNFSYRGG-YDRSSGLRMDHLLVSPSLRERLGG 254

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIP 264
           A +D   RGW KPSDH P  + LD P
Sbjct: 255 AGVDVAVRGWEKPSDHAPAWIELDWP 280


>gi|154507938|ref|ZP_02043580.1| hypothetical protein ACTODO_00424 [Actinomyces odontolyticus ATCC
           17982]
 gi|153797572|gb|EDN79992.1| hypothetical protein ACTODO_00424 [Actinomyces odontolyticus ATCC
           17982]
          Length = 271

 Score =  187 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 75/274 (27%), Positives = 123/274 (44%), Gaps = 18/274 (6%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +  ATWNVNSIR R+  + A+++ +  D++ +QE K     FP E  +   YH+   G  
Sbjct: 1   MRFATWNVNSIRTRVDRVIAFLERSGTDVLAMQEIKCRPDQFPTEAFEEAGYHVAIHGLN 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT--------------LRIG 109
            +NGVA+ S+   +++  H P      +   +EA     T                + I 
Sbjct: 61  QWNGVAVASRLPILDVQDHFPTQPAFGEPPVVEARALGVTIDTTDTLPSEDRQASSMTIW 120

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEP-LIFAGDYNIIPQPHDCYNPII 168
           +LY+P+G  +T   Y  K+ W+          L      +   GD+N+ P   D ++   
Sbjct: 121 SLYVPNGRELTHAHYAYKLEWLANLAEQGRGWLTDPSALIALVGDWNVAPMDEDVWDMSA 180

Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
           +E     +   R++F      G+ +  R   +    Y++WDY    + KN+G+RID    
Sbjct: 181 FEGATHVSAPEREAFAAFAADGWVEVTR---ERVTNYTYWDYQKLRFPKNEGMRIDFAYC 237

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
           SP   + +  A+ID   R     SDH PVIV +D
Sbjct: 238 SPALAARVSGAQIDRDERKGKGASDHVPVIVDVD 271


>gi|319652957|ref|ZP_08007062.1| exodeoxyribonuclease III [Bacillus sp. 2_A_57_CT2]
 gi|317395306|gb|EFV76039.1| exodeoxyribonuclease III [Bacillus sp. 2_A_57_CT2]
          Length = 251

 Score =  187 bits (474), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 66/262 (25%), Positives = 121/262 (46%), Gaps = 13/262 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN IRA +      + KE + DI C+QE+K ++       L+  + +     +
Sbjct: 1   MKLVSWNVNGIRACVKKGFMDYFKEVDADIFCIQESKLQEGQIEL-ILEGYHQYWNYAIK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G A+ +K +P+ +   L  ++ + + R +   +        + N+Y P+ +     
Sbjct: 60  KGYSGTAVFTKKEPLSVRYGLGDNETEPEGRILTLEYEG----FYLVNVYTPN-SQRDLA 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +   ++ W +R   +    L+  +P+I  GD N+     D  N      ++ FT E R  
Sbjct: 115 RLPYRLEWEERIREYLLG-LDQIKPVIMCGDLNVAHFEIDLKNAKSNRGNSGFTDEERGK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             +L   GF DA R  +      Y++W Y A    +N G RID+ ++S +    +  ++I
Sbjct: 174 MTRLLGSGFVDAFRYKYPEAEGAYTWWSYMAKVRERNIGWRIDYFIVSEKLKERILDSQI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
                G    SDH PV + L+I
Sbjct: 234 HCDIMG----SDHCPVALELEI 251


>gi|163787138|ref|ZP_02181585.1| exodeoxyribonuclease [Flavobacteriales bacterium ALC-1]
 gi|159877026|gb|EDP71083.1| exodeoxyribonuclease [Flavobacteriales bacterium ALC-1]
          Length = 253

 Score =  186 bits (473), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 64/263 (24%), Positives = 110/263 (41%), Gaps = 15/263 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY---HIET 59
           + + ++NVN IRA I      W+K  +PD+ICLQE K  ++           Y   +  +
Sbjct: 1   MKIVSYNVNGIRAAINRGFIDWLKATDPDVICLQEIKAMEEQLDLSLFSDAGYGYNYWFS 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GVAIL K +P  I      + +D + R I   +     ++    L     +  
Sbjct: 61  AQKKGYSGVAILCKSKPNHIEYGTGIESMDFEGRNIRVDYD--NVSVMSMYLPSGTNDAR 118

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
            + K++         +      L+ E+  +       I       +    +  + F  E 
Sbjct: 119 LAHKFEY-----MDLIHEYLNNLQKEKSNLVVVGDYNICHEAIDIHNPKMKGVSGFLPEE 173

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R+      + GF D+ R  H     YS+W Y A+S + NKG R+D+ M S      +  +
Sbjct: 174 REWLGNFIDSGFIDSFRYLHPKRQEYSWWSYRANSRANNKGWRLDYAMASKPLQENIKRS 233

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
            I T+       SDH P+++ L+
Sbjct: 234 VILTEA----VHSDHCPILLELE 252


>gi|326798804|ref|YP_004316623.1| exodeoxyribonuclease III Xth [Sphingobacterium sp. 21]
 gi|326549568|gb|ADZ77953.1| exodeoxyribonuclease III Xth [Sphingobacterium sp. 21]
          Length = 255

 Score =  186 bits (473), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 83/263 (31%), Positives = 123/263 (46%), Gaps = 13/263 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKN-FPFETLQSLNYHIETCG 61
           + + T+NVN IRA +  +   W+KE++ DI+CLQE K           ++ L Y      
Sbjct: 1   MKIITYNVNGIRAAMRKDWINWLKESDADIVCLQEIKASPDQLIDLLLIEGLGYEHYWFP 60

Query: 62  --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G AIL+K  P  +      +  D + R I A F      L I + Y P G+  
Sbjct: 61  AEKKGYSGTAILTKRSPKHVEYGCGIEAYDKEGRIIRADFE----ELSIISAYFPSGS-S 115

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              + D K  ++  F R++ + L     L+ +GDYNI  +  D +NP    N + F  E 
Sbjct: 116 GDARQDFKYQFLDDFRRYSDKLLTEFPSLVISGDYNICHRAIDIHNPKSNANSSGFLPEE 175

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R   +   N G+ D  R  H   H Y++W Y A++ +KN G RID+ M S      +  A
Sbjct: 176 RAWMESFINSGYIDTFRHLHPEPHQYTWWSYRANARAKNLGWRIDYNMASRALEGRIKQA 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
            I T        SDH PV + LD
Sbjct: 236 AILTDAL----HSDHCPVFLELD 254


>gi|307353485|ref|YP_003894536.1| exodeoxyribonuclease III [Methanoplanus petrolearius DSM 11571]
 gi|307156718|gb|ADN36098.1| exodeoxyribonuclease III [Methanoplanus petrolearius DSM 11571]
          Length = 254

 Score =  186 bits (473), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 69/262 (26%), Positives = 117/262 (44%), Gaps = 12/262 (4%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60
           + + +WNVN +RA        ++ E  PDI+C+QETK  +            Y  +  + 
Sbjct: 1   MKLVSWNVNGLRAVEKKGFLDFVNEYQPDILCVQETKAHEDQLSSSIRHPKGYFSYFSSA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+G A+ S+++P  I       +LD + R I A ++       + ++Y P+G    
Sbjct: 61  ERKGYSGTALYSRFEPESISYGFGVPELDSEGRIIIAEYS----DFNLYDIYFPNGKMSK 116

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
                 K+ + +  LR A   L+  + +I  GD N   +  D   P      + F    R
Sbjct: 117 ER-LQFKMDFYEECLRHAVSDLDSGKNVIICGDVNTAHKEIDLARPKENSKVSGFLEIER 175

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           +   +L + GF D+ R        YS+WD  + +  +N G RID+  +S   +  + SA 
Sbjct: 176 KWIDRLLDAGFKDSFRMFTSEGGYYSWWDLKSGARERNVGWRIDYFFVSDGISGRVKSAS 235

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I ++  G    SDH PV + L 
Sbjct: 236 ILSQVEG----SDHCPVELELK 253


>gi|304320394|ref|YP_003854037.1| exodeoxyribonuclease III [Parvularcula bermudensis HTCC2503]
 gi|303299296|gb|ADM08895.1| exodeoxyribonuclease III [Parvularcula bermudensis HTCC2503]
          Length = 264

 Score =  186 bits (473), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 76/269 (28%), Positives = 118/269 (43%), Gaps = 16/269 (5%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62
           + + TWN+NS+R R+  +  +++   PDI+CLQETK ++  FP +   +  Y H    GQ
Sbjct: 1   MRITTWNINSVRLRLGLVERFLETVKPDILCLQETKCQNDQFPAKAFANAGYPHQAIHGQ 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           + Y+GVA LS+    EI         D +   +          + I N Y+P G  I   
Sbjct: 61  RGYHGVATLSRLPLHEITRRQYCGKDDARHIAVTLEEG-----IVIHNFYVPAGGDIPDP 115

Query: 123 KYDDKISWIKRFLRFASQRLE--LEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
           + ++K     RF+    +      ++P I  GD NI P  +D ++          T    
Sbjct: 116 EQNEKFDHKLRFVDEMREVFTGLGDQPHILVGDLNIAPHENDVWSHKQLLKVVSHTPPET 175

Query: 181 QSFQKLQNM--GFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLL- 236
           +    L             T D   LY++W Y +  W K N+G R+DHI +SP       
Sbjct: 176 ERLAALMEAAPFIDVMRELTADEQKLYTWWSYRSKDWRKSNRGRRLDHIWVSPALKDRAL 235

Query: 237 ----HSARIDTKPRGWTKPSDHTPVIVSL 261
                +  +    RGW +PSDH PV + L
Sbjct: 236 AKGRRAFTVHDDVRGWDRPSDHAPVTLDL 264


>gi|291522762|emb|CBK81055.1| exodeoxyribonuclease III [Coprococcus catus GD/7]
          Length = 258

 Score =  186 bits (473), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 66/261 (25%), Positives = 107/261 (40%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           V + +WNVN +RA +         E + DI CLQETK +      + L     +     +
Sbjct: 8   VKLISWNVNGLRAVVGKGFVDIFNELDADIFCLQETKLQAGQIELD-LPGYEQYWNYAER 66

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G A+ ++ +P+ +   +   + D + R I   +           + +   N     
Sbjct: 67  KGYSGTAVFTRIKPLSVRYGMDIAEHDTEGRVITLEYD------SFYLVNVYTPNSKDGL 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +   R   + LE  +P++  GD N+  +  D  NP     +A F+ E R  
Sbjct: 121 ARLPYRMKWEDDFRNYLKTLEQTKPVVMCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAK 180

Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             +L   GF D  R  +      YS+W Y  ++   N G RID+ ++S      L SA I
Sbjct: 181 MTELLAAGFIDTFRYFYPDKTGEYSWWSYRFNARKNNAGWRIDYFIVSDALKERLISASI 240

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
             +  G    SDH PV + L 
Sbjct: 241 HQEIFG----SDHCPVELELK 257


>gi|90422719|ref|YP_531089.1| exodeoxyribonuclease III (xth) [Rhodopseudomonas palustris BisB18]
 gi|90104733|gb|ABD86770.1| Exodeoxyribonuclease III [Rhodopseudomonas palustris BisB18]
          Length = 256

 Score =  186 bits (473), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 86/259 (33%), Positives = 134/259 (51%), Gaps = 3/259 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + VAT+N+N++  R+ NL  W+K+  PD++CLQE K  D  FP   +    Y     G+ 
Sbjct: 1   MKVATFNINNVNRRLENLLHWLKQARPDVVCLQELKCRDAEFPARAIARAGYQAVWQGEN 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           ++NGVAILS+     +           ++             + +G LYLP+GNP    K
Sbjct: 61  TWNGVAILSRGGAPIVT---QTRLPGDRSDLQSRYIEAAIDGIVVGCLYLPNGNPQPGPK 117

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +D K++W KR    A + L  + P++ AGD+N+ P   D Y    W++DA      R +F
Sbjct: 118 FDYKLAWFKRLAGHARKLLRQDVPVVLAGDFNVAPTALDIYPTRSWDHDALVQPASRAAF 177

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            +L   G+TDA+R  H    +Y+FW Y    + ++ G+R+DH++LSP+    L  A +D 
Sbjct: 178 ARLVKQGWTDALRELHPDRRIYTFWHYMRQRYERDAGLRLDHLLLSPQLAPRLRQAGVDR 237

Query: 244 KPRGWTKPSDHTPVIVSLD 262
             RG    SDH P  + L 
Sbjct: 238 AVRGRPGASDHAPTWIVLK 256


>gi|317496610|ref|ZP_07954957.1| exodeoxyribonuclease III [Gemella moribillum M424]
 gi|316913275|gb|EFV34774.1| exodeoxyribonuclease III [Gemella moribillum M424]
          Length = 254

 Score =  186 bits (473), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 69/261 (26%), Positives = 112/261 (42%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   ++NVN +RA +  N     K+ + D  CLQETK ++     +       +     +
Sbjct: 1   MKCISFNVNGLRAIVNKNFEEDFKKLDADFFCLQETKMQEGQLDLQ-FDGYYSYFNYAER 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K++P+ +   +  D+ D + R I   +    +   I       G+ +   
Sbjct: 60  KGYSGTAIYTKHKPLNVNYGIGIDEHDTEGRVITLEY---DKFFFITVYTPNSGSELKRL 116

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
            Y       +   +     L   + ++  GD N+     D  NP     +A FT E R+ 
Sbjct: 117 DYR---MTWEEDFKNYLLELNKTKGVVVCGDLNVAHTEIDLKNPKSNTKNAGFTPEEREK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F KL + GF D  R  +      YS+W Y  ++   N G RID+ + S +    L SA+I
Sbjct: 174 FTKLLDAGFIDTFRYFNPELTGAYSWWSYRFNARKNNAGWRIDYFLTSRDLEKYLVSAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
                G    SDH PV V L+
Sbjct: 234 HNDILG----SDHCPVEVVLN 250


>gi|315925763|ref|ZP_07921970.1| exodeoxyribonuclease III [Pseudoramibacter alactolyticus ATCC
           23263]
 gi|315620872|gb|EFV00846.1| exodeoxyribonuclease III [Pseudoramibacter alactolyticus ATCC
           23263]
          Length = 254

 Score =  186 bits (473), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 69/263 (26%), Positives = 110/263 (41%), Gaps = 12/263 (4%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + +WNVN IRA        W++   PD++ +QE K E             YH+     
Sbjct: 1   MKLYSWNVNGIRAAEKKGFVDWLQREQPDVLGIQELKAEPDQLSDALKDVEGYHVFFNPA 60

Query: 62  -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+G A+  K +P  I+T L  +  + + R    T  +      + N+Y P+G+   
Sbjct: 61  ERKGYSGTAVYYKREPKRILTGLSDERFNHEGR----TIILEYPDFTLYNIYFPNGSQSD 116

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
                 K+ +   F     +R+   E +I  GD N   +  D  NP      + F    R
Sbjct: 117 ER-LQFKMDFYDGFWHDVDERVARGEKVIICGDVNTAHREIDLKNPKSNAKRSGFLPIER 175

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           +        G+ D  R  +     YS+W Y  ++   N G RID+   S  A  LL  A 
Sbjct: 176 EWMDHFFAGGYIDTYRYFYPEQVTYSWWSYRFNARKNNAGWRIDYFFASDNAKDLLADAA 235

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263
           I T   G    SDH P+ ++L++
Sbjct: 236 IHTDVTG----SDHCPISLTLNL 254


>gi|293376523|ref|ZP_06622751.1| exodeoxyribonuclease III [Turicibacter sanguinis PC909]
 gi|292644749|gb|EFF62831.1| exodeoxyribonuclease III [Turicibacter sanguinis PC909]
          Length = 251

 Score =  186 bits (473), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 77/261 (29%), Positives = 124/261 (47%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +      +++   PD +C+QETK ++     + L     +     +
Sbjct: 1   MKFISWNVNGLRACVKKGFLDFVEAEQPDFLCVQETKLQEGQIDLQ-LDGYYQYWNYAVK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K++P+++   L   + D + R I   +        +  +Y P+     + 
Sbjct: 60  KGYSGTAIFTKHEPLQVTYGLNIAEHDQEGRVITLEY----NDFYLVTVYTPNSQNELAR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
             D +++W + F R     L++ +P+I  GD N+  Q  D  NP     +A FT+E R  
Sbjct: 116 -LDYRLTWEEAF-RNYLIGLDVLKPVIVCGDLNVAHQQIDLKNPKTNTKNAGFTIEERNE 173

Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             KL N GF D  R  +    + YS+W Y A + +KN G RID+ + S    S L  ARI
Sbjct: 174 MTKLLNSGFIDTFRYFYPTKENCYSWWSYRAGARAKNVGWRIDYFITSKALESRLEDARI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
                G    SDH PV + L 
Sbjct: 234 YPDVLG----SDHCPVGLQLK 250


>gi|153815015|ref|ZP_01967683.1| hypothetical protein RUMTOR_01232 [Ruminococcus torques ATCC 27756]
 gi|145847583|gb|EDK24501.1| hypothetical protein RUMTOR_01232 [Ruminococcus torques ATCC 27756]
          Length = 252

 Score =  186 bits (473), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 68/262 (25%), Positives = 115/262 (43%), Gaps = 13/262 (4%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++   +WNVN IRA +      +  E + DI C+QE+K ++     + L   + +     
Sbjct: 2   IMKFVSWNVNGIRACVQKGFLDFFTEADADIFCIQESKMQEGQLELD-LPGYHQYWNYAV 60

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G A+ +K +P+ +   +  ++ D + R I   F                   +  
Sbjct: 61  KKGYSGTAVFTKKEPLSVTYGIGIEEHDQEGRVITCEFEDFYFVTVYTPNSQNELARLDY 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
                     +   R   ++LE ++P+I  GD N+  +  D  NP     +A FT E R 
Sbjct: 121 RM------RWEDDFRMYLKKLEEKKPVIVTGDMNVAHKEIDLKNPKTNRKNAGFTDEERG 174

Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            F +L + GF D  R  +     +YS+W Y   + +KN G RID+  +S      L  A+
Sbjct: 175 KFTELLDAGFIDTFRYFYPDREGIYSWWSYRFSARAKNAGWRIDYFCVSESLKERLKDAK 234

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I T   G    SDH P+ + +D
Sbjct: 235 ILTDVMG----SDHCPIELDMD 252


>gi|320533420|ref|ZP_08034105.1| putative exodeoxyribonuclease III [Actinomyces sp. oral taxon 171
           str. F0337]
 gi|320134357|gb|EFW26620.1| putative exodeoxyribonuclease III [Actinomyces sp. oral taxon 171
           str. F0337]
          Length = 269

 Score =  186 bits (473), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 74/272 (27%), Positives = 125/272 (45%), Gaps = 16/272 (5%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSIR R+  + A+++  + D + +QE K     FP E  ++  Y +   G  
Sbjct: 1   MRLATWNVNSIRTRVDRVLAFLEREDIDALAMQEIKCRPDQFPVEPFEAAGYELAIHGLN 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-----------TQTLRIGNLY 112
            +NGVAI S+    ++ T  P           +                  + +R+ +LY
Sbjct: 61  QWNGVAIASRVGLGDVATSFPEQPAWASKPEAKPVVEARALGATVGTASDAKPVRLWSLY 120

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWE 170
           +P+G  +T + Y  K+ W++      +  LE E  L     GD+N+ P+  D ++  ++E
Sbjct: 121 VPNGRELTHSHYTYKLDWLRVLRDDVAAWLEEEPDLPLALVGDWNVAPRDEDVWDMSVFE 180

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230
                +   R++F      G  +  R   +    Y++WDY    + +N+G+RID +  SP
Sbjct: 181 GATHVSSPEREAFAAFAEAGMREVTR---ERVTNYTYWDYQKLRFPRNEGMRIDFVYASP 237

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
                +  A ID   R     SDH PVIV +D
Sbjct: 238 ALAGRVTGAAIDRDERKGKGASDHVPVIVEVD 269


>gi|288920812|ref|ZP_06415110.1| exodeoxyribonuclease III Xth [Frankia sp. EUN1f]
 gi|288347771|gb|EFC82050.1| exodeoxyribonuclease III Xth [Frankia sp. EUN1f]
          Length = 296

 Score =  186 bits (473), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 79/262 (30%), Positives = 122/262 (46%), Gaps = 6/262 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFP---FETLQSLNYHIETC 60
           + +ATWN+NS +AR   L  W+   +PD++CLQETK  D  F     E L    Y +   
Sbjct: 1   MRIATWNINSAKARQSRLIEWLDRASPDVVCLQETKLADDAFLELFDEDLFRRGYRVAHH 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           G   +NGVAILS+    ++   LPGD    +        T     +R+ +LY+P+G  + 
Sbjct: 61  GDGRWNGVAILSRAGLDDVQRGLPGDPGFPKPEPRAIAATCGG--IRVWSLYVPNGRTVD 118

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
              Y  K++W+        +       +   GD+NI P   D ++   +E     T   R
Sbjct: 119 DPHYAYKLAWLAALRDVVGELAPAGPVM-TLGDFNIAPTDADVWDIAAFEGATHVTEAER 177

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            +  +L   G  D +RA      +Y++WDY    + KN G+RID  + + +      +  
Sbjct: 178 AALGELHGAGLVDLMRARWPEETVYTYWDYRQLCFPKNYGMRIDLALATADVAGRTRAVW 237

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           +D   R  T  SDH PV+V LD
Sbjct: 238 VDRAARKGTGTSDHAPVVVDLD 259


>gi|293188973|ref|ZP_06607706.1| exodeoxyribonuclease III [Actinomyces odontolyticus F0309]
 gi|292822075|gb|EFF81001.1| exodeoxyribonuclease III [Actinomyces odontolyticus F0309]
          Length = 271

 Score =  186 bits (473), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 75/274 (27%), Positives = 123/274 (44%), Gaps = 18/274 (6%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +  ATWNVNSIR R+  + A+++ +  D++ +QE K     FP E  +   YH+   G  
Sbjct: 1   MRFATWNVNSIRTRVDRVIAFLERSGTDVLAMQEIKCRPDQFPTEAFEEAGYHVAIHGLN 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT--------------LRIG 109
            +NGVA+ S+   +++  H P      +   +EA     T                + I 
Sbjct: 61  QWNGVAVASRLPILDVQDHFPTQPAFGEPPVVEARALGVTIDTTNTLPSEDRQASSMTIW 120

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEP-LIFAGDYNIIPQPHDCYNPII 168
           +LY+P+G  +T   Y  K+ W+          L      +   GD+N+ P   D ++   
Sbjct: 121 SLYVPNGRELTHAHYAYKLEWLANLAEQGRGWLTDPSALIALVGDWNVAPLDEDVWDMSA 180

Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
           +E     +   R++F      G+ +  R   +    Y++WDY    + KN+G+RID    
Sbjct: 181 FEGATHVSAPEREAFAAFAADGWVEVTR---ERVTNYTYWDYQKLRFPKNEGMRIDFAYC 237

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
           SP   + +  A+ID   R     SDH PVIV +D
Sbjct: 238 SPALAARVSGAQIDRDERKGKGASDHVPVIVDVD 271


>gi|325673954|ref|ZP_08153644.1| exodeoxyribonuclease III [Rhodococcus equi ATCC 33707]
 gi|325555219|gb|EGD24891.1| exodeoxyribonuclease III [Rhodococcus equi ATCC 33707]
          Length = 259

 Score =  186 bits (473), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 72/257 (28%), Positives = 119/257 (46%), Gaps = 7/257 (2%)

Query: 12  NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAIL 71
           NS+RAR   +  W+   + D++ +QETK +D+ FP+E      Y +   G   +NGVAI 
Sbjct: 2   NSVRARTDRIVDWLARTDTDVLAMQETKCKDEQFPYERFTEAGYEVAHVGLSQWNGVAIA 61

Query: 72  SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT-----LRIGNLYLPHGNPITSTKYDD 126
           S+    ++           +    EAT            +R+ +LY+P+G  +T   Y  
Sbjct: 62  SRIGLEDVQVGFADQPGFNKDPEAEATREARAIGATVGGVRVWSLYVPNGRELTDPHYVY 121

Query: 127 KISWIKRFLRFASQRL--ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ 184
           K+ W+ +    A   L    +  +   GD+N+ P   D ++P  +E     +   R +F 
Sbjct: 122 KLEWLAKLRADAEGWLAGNPDAQIALVGDWNVAPTDEDVWDPAFFEGKTHTSQPERDAFD 181

Query: 185 KLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK 244
                GF D +R       +Y++WDY    + K +G+RID+++ SP   + +  A ID  
Sbjct: 182 AFAEAGFADVVRPHAPGPGVYTYWDYTQLRFPKRQGMRIDYVLGSPAFAARVTGAHIDRD 241

Query: 245 PRGWTKPSDHTPVIVSL 261
            R     SDH PV+V L
Sbjct: 242 ERKGKGASDHAPVVVDL 258


>gi|223935760|ref|ZP_03627676.1| exodeoxyribonuclease III Xth [bacterium Ellin514]
 gi|223895768|gb|EEF62213.1| exodeoxyribonuclease III Xth [bacterium Ellin514]
          Length = 250

 Score =  186 bits (473), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 71/259 (27%), Positives = 114/259 (44%), Gaps = 11/259 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +  N   ++ + +PDI+CLQETK    +       +   +  T  +
Sbjct: 1   MKLISWNVNGLRAVLKKNFLDFLAKEDPDILCLQETKCTPDDVEQLWPATFTTYWNTAQK 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +PI +   +   + D++ R + + +                 +    T
Sbjct: 61  KGYSGTAIFTKAKPISVSLGINCPEHDMEGRVLTSEYPEF-----FLVNVYVPNSKRELT 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +   +  W   FL +  + LE ++P+IF GD N+     D  NP     +  FT E R  
Sbjct: 116 RLAYRQQWDCDFLSYLKK-LEKKKPVIFCGDLNVAHTEIDLANPKANVKNHGFTPEERAG 174

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F  +   GF D  R        YS+W     + S+N G RID+ ++S      L  A I 
Sbjct: 175 FSTVIKAGFIDTFREFEKGGGHYSWWSPMGGARSRNVGWRIDYFLISSALRPRLKRAFIQ 234

Query: 243 TKPRGWTKPSDHTPVIVSL 261
               G    SDH PV + L
Sbjct: 235 PNIPG----SDHCPVGIEL 249


>gi|239941948|ref|ZP_04693885.1| putative exodeoxyribonuclease [Streptomyces roseosporus NRRL 15998]
 gi|239988412|ref|ZP_04709076.1| putative exodeoxyribonuclease [Streptomyces roseosporus NRRL 11379]
 gi|291445398|ref|ZP_06584788.1| exodeoxyribonuclease [Streptomyces roseosporus NRRL 15998]
 gi|291348345|gb|EFE75249.1| exodeoxyribonuclease [Streptomyces roseosporus NRRL 15998]
          Length = 271

 Score =  186 bits (473), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 59/270 (21%), Positives = 103/270 (38%), Gaps = 10/270 (3%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++TV + NVN +RA        W+     D++CLQE + E    P E      +H     
Sbjct: 1   MLTVTSVNVNGLRAAAKKGFVEWLAATEADVVCLQEVRAELAQLPEEVGAPEGWHTVHAP 60

Query: 62  Q--KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIE--ATFTINTQTLRIGNLYLPHGN 117
              K   GV++ S++ P  +     G  +     F        I+   + + +LYLP G 
Sbjct: 61  AAAKGRAGVSVYSRHAPERVQIGFGGHGVPGAEEFDTSGRYAEIDLPGVTVASLYLPSGE 120

Query: 118 PITSTKYD---DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
             T  + +      +++       ++       ++  GD+NI  Q  D  N       + 
Sbjct: 121 VGTERQDEKERFMAAFLPYLQGLKARAAADGREVVVCGDWNIAHQEADLKNWKANRKSSG 180

Query: 175 FTLEVRQSFQKLQNMGFTDAIRA--THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
           F  E R    ++ +      +      D    YS+W Y   ++  + G RID+ M +P  
Sbjct: 181 FLPEERAWLTRVLDEAAYVDVVRALHPDVEGPYSWWSYRGRAFDNDTGWRIDYQMATPGL 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
                 A ++       + SDH PV V  +
Sbjct: 241 AGRAVKAWVERAATHAERWSDHAPVTVVYE 270


>gi|317501545|ref|ZP_07959741.1| exodeoxyribonuclease III Xth [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331088593|ref|ZP_08337504.1| exodeoxyribonuclease [Lachnospiraceae bacterium 3_1_46FAA]
 gi|316897056|gb|EFV19131.1| exodeoxyribonuclease III Xth [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330407550|gb|EGG87050.1| exodeoxyribonuclease [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 250

 Score =  186 bits (473), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 68/261 (26%), Positives = 114/261 (43%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN IRA +      +  E + DI C+QE+K ++     + L   + +     +
Sbjct: 1   MKFVSWNVNGIRACVQKGFLDFFTEADADIFCIQESKMQEGQLELD-LPGYHQYWNYAVK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G A+ +K +P+ +   +  ++ D + R I   F                   +   
Sbjct: 60  KGYSGTAVFTKKEPLSVTYGIGIEEHDQEGRVITCEFEDFYFVTVYTPNSQNELARLDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +   R   ++LE ++P+I  GD N+  +  D  NP     +A FT E R  
Sbjct: 120 M------RWEDDFRMYLKKLEEKKPVIVTGDMNVAHKEIDLKNPKTNRKNAGFTDEERGK 173

Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L + GF D  R  +     +YS+W Y   + +KN G RID+  +S      L  A+I
Sbjct: 174 FTELLDAGFIDTFRYFYPDREGIYSWWSYRFSARAKNAGWRIDYFCVSESLKERLKDAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            T   G    SDH P+ + +D
Sbjct: 234 LTDVMG----SDHCPIELDMD 250


>gi|157964825|ref|YP_001499649.1| exodeoxyribonuclease III [Rickettsia massiliae MTU5]
 gi|157844601|gb|ABV85102.1| Exodeoxyribonuclease III [Rickettsia massiliae MTU5]
          Length = 268

 Score =  186 bits (473), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 96/259 (37%), Positives = 142/259 (54%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+NSI+ R++ L  ++ +  PDI+ LQE K E   FPF+ L  L Y+    GQK
Sbjct: 9   MKIATWNINSIKTRLNLLRNFLSKETPDILLLQEIKCETAKFPFDALSDLPYNSYVHGQK 68

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           SYNGVAI+SK+   EI+   P +    QARF+E   ++      I +LY P+G+ + S K
Sbjct: 69  SYNGVAIISKFPADEIIKDFPNNYCSDQARFLEIKLSLPIGFCNIISLYAPNGSFVGSDK 128

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+++   F+ + S +   +E  I  GD+NI P   D Y+P +     CFT   ++  
Sbjct: 129 FVAKLAFYDNFINYLSTKKSFDEKTIIGGDFNIAPFDIDVYSPKLLAETTCFTEVEQKKL 188

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + + N GF D  R  H     +S+WDY A  + +NKG+RID I+        L +  +D 
Sbjct: 189 RTILNSGFEDLYRLMHPNKQEFSWWDYRAGCFEQNKGMRIDMILGCNNTIDYLENCYMDY 248

Query: 244 KPRGWTKPSDHTPVIVSLD 262
             R   KPSDH PVI S  
Sbjct: 249 NLRTQEKPSDHIPVIASFK 267


>gi|88607141|ref|YP_505100.1| exodeoxyribonuclease III [Anaplasma phagocytophilum HZ]
 gi|88598204|gb|ABD43674.1| exodeoxyribonuclease III [Anaplasma phagocytophilum HZ]
          Length = 273

 Score =  186 bits (472), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 83/273 (30%), Positives = 140/273 (51%), Gaps = 12/273 (4%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           ++ V TWNVNSIR RI +L + + E++ D+  LQE K  ++ FPF  L++L Y     GQ
Sbjct: 1   MIRVITWNVNSIRKRIEHLCSVLSEHSIDVAMLQEIKCTNEQFPFVELEALGYKCYVHGQ 60

Query: 63  KSYNGVAILSKYQPIEIVTHLP-----------GDDLDVQARFIEATFTINTQTLRIGNL 111
           KS NGVAI+SK   +E+V++                 +              + +R+ ++
Sbjct: 61  KSRNGVAIISKLPVVEVVSYSVLDEGKELESAGSYSSEESRYIECTLECTGNKKIRVVSV 120

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
           Y+P+G  + S  +  K+ +++         ++ E+ LI  GD+N+ P+  D ++P   + 
Sbjct: 121 YVPNGQEVESETFFYKLKFLEHLKDRLLNIMKTEDFLIAGGDFNVAPEEIDVHDPKALDG 180

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSP 230
             CF +  R  F+++ N G  D  R         +S+W+Y    W  N+G+RID ++ SP
Sbjct: 181 RLCFHILERAKFREILNNGIVDIFRTFVGIDRKEFSWWNYREGGWQNNRGLRIDALLSSP 240

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +    +    I +K RGW  PSDH PV+  +D+
Sbjct: 241 QIADKVLDCSILSKVRGWDTPSDHAPVMGDIDV 273


>gi|294499447|ref|YP_003563147.1| exodeoxyribonuclease III [Bacillus megaterium QM B1551]
 gi|294349384|gb|ADE69713.1| exodeoxyribonuclease III [Bacillus megaterium QM B1551]
          Length = 253

 Score =  186 bits (472), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 60/263 (22%), Positives = 109/263 (41%), Gaps = 14/263 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN IRA +      + +E N D+ C+QETK ++     + L+    +     +
Sbjct: 1   MKLISWNVNGIRACVRKGFLDYFQEVNADVFCIQETKLQEGQIDLQ-LEGYYQYWNYAVK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G A+ +K +P+ +   +  +  D                +   N            
Sbjct: 60  KGYSGTAVFTKQKPLSVSYGVGKESEDEGRIITLEFEQCYVVNVYTPNSKRDLARLEERL 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +++         L    ++L   + +I  GD N+     D  NP     ++ FT+E R  
Sbjct: 120 QWE-------DDLLVYLKKLNSRKAVILCGDLNVAHAEIDLRNPKPNRGNSGFTIEERGK 172

Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
              L   GF D  R  +      Y++W Y      +N G RID+ ++S    +++  + I
Sbjct: 173 MTTLLASGFLDTFRYLYPNQEGAYTWWSYMNKVRERNIGWRIDYFIVSERMKNVIQESAI 232

Query: 242 DTKPRGWTKPSDHTPVIVSLDIP 264
                G    SDH PV++ L++P
Sbjct: 233 HPHVMG----SDHCPVMLELNVP 251


>gi|16081140|ref|NP_391968.1| apurinic/apyrimidinic endonuclease [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221312070|ref|ZP_03593917.1| multifunctional DNA-repair enzyme [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221316395|ref|ZP_03598200.1| multifunctional DNA-repair enzyme [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221321308|ref|ZP_03602602.1| multifunctional DNA-repair enzyme [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221325591|ref|ZP_03606885.1| multifunctional DNA-repair enzyme [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|585113|sp|P37454|EXOA_BACSU RecName: Full=Exodeoxyribonuclease
 gi|467372|dbj|BAA05218.1| 3'-exo-deoxyribonuclease [Bacillus subtilis]
 gi|2636635|emb|CAB16125.1| apurinic/apyrimidinic endonuclease [Bacillus subtilis subsp.
           subtilis str. 168]
          Length = 252

 Score =  186 bits (472), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 70/263 (26%), Positives = 120/263 (45%), Gaps = 14/263 (5%)

Query: 4   VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + +WNVN +RA +      +++KE + DIICLQETK +D     +  +  + +     
Sbjct: 1   MKLISWNVNGLRAVMRKMDFLSYLKEEDADIICLQETKIQDGQVDLQP-EDYHVYWNYAV 59

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G A+ SK +P++++  +  ++ D + R I   F                   I  
Sbjct: 60  KKGYSGTAVFSKQEPLQVIYGIGVEEHDQEGRVITLEFENVFVMTVYTPNSRRGLERIDY 119

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
                     +  L      L+ ++P+I  GD N+  Q  D  NP    N+A F+ + R+
Sbjct: 120 RMQ------WEEALLSYILELDQKKPVILCGDLNVAHQEIDLKNPKANRNNAGFSDQERE 173

Query: 182 SFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           +F +    GF D+ R  +      YS+W Y A +  +N G RID+ ++S      +  A 
Sbjct: 174 AFTRFLEAGFVDSFRHVYPDLEGAYSWWSYRAGARDRNIGWRIDYFVVSESLKEQIEDAS 233

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263
           I     G    SDH PV + ++I
Sbjct: 234 ISADVMG----SDHCPVELIINI 252


>gi|311743284|ref|ZP_07717091.1| exodeoxyribonuclease III [Aeromicrobium marinum DSM 15272]
 gi|311313352|gb|EFQ83262.1| exodeoxyribonuclease III [Aeromicrobium marinum DSM 15272]
          Length = 254

 Score =  186 bits (472), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 67/252 (26%), Positives = 121/252 (48%), Gaps = 2/252 (0%)

Query: 12  NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAIL 71
           NSIR+RI  +  +++ ++ D++ +QETK  +  FP   L +L Y     G   +NGVAI+
Sbjct: 2   NSIRSRIDRVVGFLERHDVDVLAIQETKCREDQFPGLELSALGYEYAHAGLNQWNGVAIV 61

Query: 72  SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWI 131
           S+    ++ T    D           +       +R+ +LY+P+G  +    Y  K++W+
Sbjct: 62  SRVGLDDVATTFADDQPTFADVLEPRSIGATCGGVRVWSLYVPNGRELDHDHYVYKLAWL 121

Query: 132 KRFLRFASQRL--ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNM 189
            R      + L  + +  +   GD+N+ PQ  D ++   +      +   R +F+ + + 
Sbjct: 122 DRLREAGQEWLAADPDAQIALTGDWNVAPQDEDVWDMAAFAGSTHVSEPERAAFRAVVDA 181

Query: 190 GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT 249
           G+ D +R       +Y+FWDY    + K +G+RID  + SP   + +    ID + R   
Sbjct: 182 GYADVVRPHTPGPGVYTFWDYQQLRFPKREGMRIDFQLCSPALAARVEKGWIDREERKGK 241

Query: 250 KPSDHTPVIVSL 261
             SDH PV++ L
Sbjct: 242 GASDHAPVVIDL 253


>gi|167759302|ref|ZP_02431429.1| hypothetical protein CLOSCI_01649 [Clostridium scindens ATCC 35704]
 gi|167663176|gb|EDS07306.1| hypothetical protein CLOSCI_01649 [Clostridium scindens ATCC 35704]
          Length = 250

 Score =  186 bits (472), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 70/259 (27%), Positives = 112/259 (43%), Gaps = 13/259 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN IRA +      + +E + DI C+QE+K ++     ET    + +     +
Sbjct: 1   MKFVSWNVNGIRACVQKGFMEFFQEADADIFCIQESKMQEGQLELET-PGYHQYWNYAKK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +PI +   +  ++ D + R I   F                   +   
Sbjct: 60  KGYSGTAIFTKQEPISVSYGIGIEEHDQEGRVITLEFEDYYFITVYTPNSQNELARLPYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +       ++LE  +P+IF GD N+  +  D  NP     +A FT E R  
Sbjct: 120 MQ------WEDDFLAYLKKLEEAKPVIFCGDLNVAHKEIDLKNPKTNRKNAGFTDEERAK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F  L + GF D  R  +     +YS+W Y   + +KN G RID+  +S      L  A+I
Sbjct: 174 FTSLVDAGFIDTFRYFYPDAQGIYSWWSYRFSARAKNAGWRIDYFCVSESLEERLVDAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVS 260
            T   G    SDH P+++ 
Sbjct: 234 LTDVMG----SDHCPIVLE 248


>gi|153853826|ref|ZP_01995182.1| hypothetical protein DORLON_01173 [Dorea longicatena DSM 13814]
 gi|149753576|gb|EDM63507.1| hypothetical protein DORLON_01173 [Dorea longicatena DSM 13814]
          Length = 250

 Score =  186 bits (472), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 70/261 (26%), Positives = 109/261 (41%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN IRA           E + DI C+QE+K +      +T    + +     +
Sbjct: 1   MKFISWNVNGIRACAQKGFMDIFNEADADIFCIQESKMQAGQLELDT-PGYHQYWNYAER 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +P+ +   L  ++ D + R I   F                   +   
Sbjct: 60  KGYSGTAIFTKEEPLSVSYGLGIEEHDKEGRVITLEFEDFYFITVYTPNSQSELARLDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +       ++LE ++P+IF GD N+  +  D  NP     +A FT E R  
Sbjct: 120 M------RWEDAFLAYLKKLEEKKPVIFCGDLNVAHKEIDLKNPKTNRKNAGFTDEERGK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F  L N GF D  R  +     +YS+W Y   +  KN G RID+  +S      +  A+I
Sbjct: 174 FTNLLNAGFIDTFRYFYPDAEGIYSWWSYRFSARKKNAGWRIDYFCVSESLKDRIKDAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            T+  G    SDH PV +  +
Sbjct: 234 LTEIMG----SDHCPVELDFE 250


>gi|149200232|ref|ZP_01877254.1| exodeoxyribonuclease (ExoA) [Lentisphaera araneosa HTCC2155]
 gi|149136674|gb|EDM25105.1| exodeoxyribonuclease (ExoA) [Lentisphaera araneosa HTCC2155]
          Length = 258

 Score =  186 bits (472), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 71/265 (26%), Positives = 117/265 (44%), Gaps = 14/265 (5%)

Query: 1   MSVVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HI 57
           MSV  + +WNVN IRA         ++  + D+ICLQETK   +    E +   NY  + 
Sbjct: 1   MSV-KLISWNVNGIRAVEKKGFVDLMQSWDADVICLQETKAHKEQLSDELINIGNYTSYW 59

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
            +  +K Y+ VAI S+ +PI ++  L  ++ D + R I A ++       +  +Y P+  
Sbjct: 60  HSGEKKGYSSVAIYSRIEPIRVIEGLGIEEFDREGRVIIAEYS----DFYLFGVYFPNAQ 115

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
                   D        L    +    ++  +  GD+N+  +  D  NP   E +  +++
Sbjct: 116 AELKRI--DYRLEFGDALIEQLKEKYSDKACVLCGDFNVAHKAIDLKNPKANEKNPGYSI 173

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
           + R    K    G  D  R  +     YS+W Y   + S+N G RID+  +S  A   + 
Sbjct: 174 QERNWMDKFLAAGHVDTFRMFNQNPDEYSWWSYRGGARSRNVGWRIDYFCVSESARDRVL 233

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLD 262
            A I  +  G    SDH PV + L+
Sbjct: 234 DAGIMQEVLG----SDHCPVSIELE 254


>gi|297570792|ref|YP_003696566.1| exodeoxyribonuclease III Xth [Arcanobacterium haemolyticum DSM
           20595]
 gi|296931139|gb|ADH91947.1| exodeoxyribonuclease III Xth [Arcanobacterium haemolyticum DSM
           20595]
          Length = 269

 Score =  186 bits (472), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 72/272 (26%), Positives = 123/272 (45%), Gaps = 16/272 (5%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+NS RAR   +   +  ++ D + LQE K + + FP   +++  Y +   G  
Sbjct: 1   MKIATWNINSARARADRILDVLTRHDLDALALQEIKCKPEQFPAADIEAAGYEVAAHGLN 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ-----------TLRIGNLY 112
            +NGVAI+S+    ++    PG    V+         I               + + +LY
Sbjct: 61  QWNGVAIISRVGLEDVRREFPGQPGFVKGEPEGGRSFIPGPAEARAIGARVGGIDLWSLY 120

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEE--PLIFAGDYNIIPQPHDCYNPIIWE 170
           +P+G       Y  K+ +++R   FA  ++  ++   L   GD+N+IP   D ++P   E
Sbjct: 121 VPNGRATGDPHYHYKLEFLRRLRDFAEGQMRDDDAAQLALVGDWNVIPTDADVWDPAAME 180

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230
           +    T   R +F    + G  +    +      Y+FWDY    + KN+G+RID++  SP
Sbjct: 181 DGIYLTEPERAAFHAFADAGMVEL---SRQYATNYTFWDYQKLRFPKNEGMRIDYVYASP 237

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
              +      ID   R     SDH PVI+  +
Sbjct: 238 ALAARSIDGTIDRDERKGKGASDHVPVIIEFE 269


>gi|203287972|ref|YP_002222987.1| exodeoxyribonuclease III [Borrelia recurrentis A1]
 gi|201085192|gb|ACH94766.1| exodeoxyribonuclease III [Borrelia recurrentis A1]
          Length = 254

 Score =  186 bits (472), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 63/261 (24%), Positives = 101/261 (38%), Gaps = 9/261 (3%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++ + +WNVN IRA        +I E +PDI+CLQETK   +  P E +    Y+     
Sbjct: 1   MMNLISWNVNGIRAVSNKGFLNFIAEYSPDILCLQETKALKEQLPRELIDIEGYYSYFSK 60

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
                   +    +   I       ++  +    E    I      I        +    
Sbjct: 61  SIIKGYSGVAIYSKIEPIKLENMNIEIFDR----EGRCIIAHYHDFILINAYFPNSQSLR 116

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            + + K+ ++  F   A+  +   + LI  GD+NI     D  NP      A F +E   
Sbjct: 117 KRLNYKLEFLMSFESIANSFVTSGKNLIVCGDFNIAHTEIDLSNPKTSRESAGFYVEETN 176

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
                 N G+ D  R  +     Y++WDY   +  +N G RID+ +++      +  A I
Sbjct: 177 WMDNFLNRGYVDTFRMFNKEPGNYTWWDYKTRARERNVGWRIDYFVINKAFQFKVKDALI 236

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
             K  G    SDH PV + L 
Sbjct: 237 LNKVMG----SDHCPVFLKLK 253


>gi|323358249|ref|YP_004224645.1| exonuclease III [Microbacterium testaceum StLB037]
 gi|323274620|dbj|BAJ74765.1| exonuclease III [Microbacterium testaceum StLB037]
          Length = 281

 Score =  186 bits (472), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 73/267 (27%), Positives = 120/267 (44%), Gaps = 11/267 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSIRAR+     +    + D++ +QE K + + FP+   +   YH+   G  
Sbjct: 1   MRLATWNVNSIRARVTRTVEFCVREHIDVLAMQEIKCKTEQFPYAAFEEAGYHVAAHGLN 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLD------VQARFIEATFTINTQTLRIGNLYLPHGN 117
            +NGVAI S+    ++    P                           +R+ +LY+P+G 
Sbjct: 61  QWNGVAIASREPLEDVEIGFPDMPGFEKGKEGPDLPQEARAIGATVNGVRVWSLYVPNGR 120

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIF--AGDYNIIPQPHDCYNPIIWEN-DAC 174
            +    Y  K+ W+++  ++ +  L  +  L     GD+NI P   D  +P + E     
Sbjct: 121 GLDDPHYAYKLDWLEKLRQYTADTLAKDPDLPLALTGDFNIAPTDADNGDPTVVEGATTH 180

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
            +   R +F   +  G TD +R    T   Y++WDY    + +N+G+RID I+ S     
Sbjct: 181 VSPAERAAFAAFETAGLTDVVRPLIPTG--YTYWDYKQLRFPRNEGLRIDFILGSRAFAD 238

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261
            +  A I    R    PSDH PV+  L
Sbjct: 239 AVQGAEIHRDERKGEVPSDHVPVVADL 265


>gi|320010283|gb|ADW05133.1| exodeoxyribonuclease III Xth [Streptomyces flavogriseus ATCC 33331]
          Length = 271

 Score =  186 bits (472), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 58/270 (21%), Positives = 109/270 (40%), Gaps = 10/270 (3%)

Query: 3   VVTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++TV T NVN IRA +      W+     ++ICLQE + E +  P E  +   +H     
Sbjct: 1   MLTVTTVNVNGIRAAVKKGFVEWLGRTEAEVICLQEVRAEAQQLPDEVREPEGWHAVYAP 60

Query: 62  Q--KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIE--ATFTINTQTLRIGNLYLPHGN 117
              K   GV IL++  P  +     G ++     F        ++   + + +LYLP G 
Sbjct: 61  AAAKGRAGVGILTRRAPERVQIGFGGFEVPGSEEFDTSGRYIEVDLPGVTVASLYLPSGE 120

Query: 118 PITSTKYD---DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
             T  + +      +++       ++       ++  GD+NI  +  D  N      ++ 
Sbjct: 121 VGTERQEEKERFMAAFLPYLQGLKARAAAGGREVVVCGDWNIAHREADLKNWKSNRKNSG 180

Query: 175 FTLEVRQSFQKLQNMGFTDAIRA--THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
           F  E R+   ++ +      +      +    YS+W Y   ++  + G RID+ + +P  
Sbjct: 181 FLPEEREWLTRVFDEAAYVDVVRALHPEQEGPYSWWSYRGRAFDNDAGWRIDYQVATPGL 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
                 A ++       + SDH PV V+ +
Sbjct: 241 AGRAAKAWVERAATHGERWSDHAPVTVTYE 270


>gi|309775417|ref|ZP_07670420.1| exodeoxyribonuclease III [Erysipelotrichaceae bacterium 3_1_53]
 gi|308916806|gb|EFP62543.1| exodeoxyribonuclease III [Erysipelotrichaceae bacterium 3_1_53]
          Length = 254

 Score =  186 bits (471), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 67/261 (25%), Positives = 111/261 (42%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN IRA +      +  E + DI C+QETK +      ET    + ++ +  +
Sbjct: 1   MRLVSWNVNGIRACMQKGFMDFFNEIDADIFCIQETKMQPGQLEIET-PLYHQYMNSAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G  + SK +PI +   L  ++ D + R I   +                   +   
Sbjct: 60  KGYSGTMVFSKQEPIHVSYGLGIEEHDHEGRVITCEYEDFYLVCVYTPNSKDGLLRLDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +   R    +L   + ++  GD N+  +  D  NP     +A FT E R  
Sbjct: 120 M------EWEDAFRTYLHKLNETKSVLVCGDLNVAHKEIDLKNPKTNRRNAGFTDEERNK 173

Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
              L + GF D+ R  +     +YS+W Y   +  KN G RID+ ++S +A   +  A+I
Sbjct: 174 MSVLLDSGFIDSYRYLYPEQEGVYSWWSYRFKAREKNAGWRIDYFLVSEDAKDGIREAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            T   G    SDH PV +  +
Sbjct: 234 HTDIYG----SDHCPVSLEFE 250


>gi|164688495|ref|ZP_02212523.1| hypothetical protein CLOBAR_02140 [Clostridium bartlettii DSM
           16795]
 gi|164602908|gb|EDQ96373.1| hypothetical protein CLOBAR_02140 [Clostridium bartlettii DSM
           16795]
          Length = 252

 Score =  186 bits (471), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 69/258 (26%), Positives = 110/258 (42%), Gaps = 13/258 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN IRA +      +  E + DI CLQETK ++     + L   + +     +
Sbjct: 1   MKFISWNVNGIRACVTKGFLDFFNEVDADIFCLQETKLQEGQIELD-LPGYHQYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +PI +   +  ++ D + R I   F                   +   
Sbjct: 60  KGYSGTAIFTKQEPISVNYGIQIEEHDKEGRVITLEFDNFYFVTVYTPNSQSELKRLDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +   R    +L  ++ +I  GD N+  +  D  NP     +A FT + R+ 
Sbjct: 120 M------KWEDDFRKYLLKLNSKKGVIVCGDLNVAHKEIDLKNPKTNRKNAGFTDQEREK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L   GF D  R  +     +YS+W Y   +  KN G RID+   S +  + L SA I
Sbjct: 174 FTELLESGFIDTYRHFNPDKEGIYSWWSYRFKAREKNAGWRIDYFCASKDLENNLVSADI 233

Query: 242 DTKPRGWTKPSDHTPVIV 259
            T+  G    SDH P+ +
Sbjct: 234 HTQILG----SDHCPIEL 247


>gi|160936797|ref|ZP_02084163.1| hypothetical protein CLOBOL_01687 [Clostridium bolteae ATCC
           BAA-613]
 gi|158440289|gb|EDP18035.1| hypothetical protein CLOBOL_01687 [Clostridium bolteae ATCC
           BAA-613]
          Length = 251

 Score =  186 bits (471), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 70/262 (26%), Positives = 117/262 (44%), Gaps = 13/262 (4%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           +  + +WNVN +RA +      + +E   D+ C+QE+K ++     + L   + +     
Sbjct: 1   MTKLISWNVNGLRACVGKGFLDFFREAEADVFCIQESKLQEGQIELD-LPGYHQYWNYAR 59

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G A+ +K +P+ +   +  ++ D + R I A F                 +    
Sbjct: 60  KKGYSGTAMFTKEEPVSVSYGIGMEEHDTEGRVITAEFPE-----YYVVTCYTPNSQDGL 114

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            + D ++ W   FL +  + LE  +P++F GD N+  +  D  NP     +A FT E R 
Sbjct: 115 ARLDYRMKWEDDFLAYLKK-LEENKPVVFCGDLNVAHKEIDLKNPKTNRKNAGFTDEERG 173

Query: 182 SFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            F  L   GF D  R  +      YS+W Y   + +KN G RID+  +S      L SA 
Sbjct: 174 KFTDLLAAGFVDTFRYFYPDLEGTYSWWSYRFSARAKNAGWRIDYFCVSESLKDRLVSAS 233

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I     G    SDH PV + ++
Sbjct: 234 IHNTVMG----SDHCPVELVIE 251


>gi|254500351|ref|ZP_05112502.1| exodeoxyribonuclease III [Labrenzia alexandrii DFL-11]
 gi|222436422|gb|EEE43101.1| exodeoxyribonuclease III [Labrenzia alexandrii DFL-11]
          Length = 269

 Score =  186 bits (471), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 80/266 (30%), Positives = 126/266 (47%), Gaps = 9/266 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62
           + + TWN+NS+R R+  +   I+E  PD+ICLQETK  D NFP +  ++  Y H+   GQ
Sbjct: 5   LKLVTWNINSVRLRMPIVEQLIEEVAPDVICLQETKCPDANFPEKAFRTAGYEHMAINGQ 64

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+GVA +SK     +      +     +R +      N   LR+ N Y+P G      
Sbjct: 65  KGYHGVATVSKLPLTNVEKRDFCNVG--DSRHVAVDVPFNGSALRVHNFYVPAGGDEPDR 122

Query: 123 KYDDKISWIKRFLRFASQRLE---LEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
             +DK      FL    + L+     +P +  GD N+ P  HD ++          T   
Sbjct: 123 DKNDKFGHKLDFLGEMQEWLQGAETAKPAVLVGDLNVAPYEHDVWSHKKLLKVVSHTPIE 182

Query: 180 RQSFQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLL 236
            + F+ ++          + T     LY++W Y A  W + +KG R+DH+ +S  A++ +
Sbjct: 183 TELFETVRETGGWLDAMRQFTPMEEKLYTWWSYRAKDWSAADKGRRLDHVWVSEPASNHI 242

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLD 262
            S  +    RGW KPSDH PV+   +
Sbjct: 243 KSTEVLRDARGWEKPSDHAPVVAVFE 268


>gi|19553934|ref|NP_601936.1| exonuclease III [Corynebacterium glutamicum ATCC 13032]
 gi|62391577|ref|YP_226979.1| exodeoxyribonuclease III [Corynebacterium glutamicum ATCC 13032]
 gi|145296740|ref|YP_001139561.1| hypothetical protein cgR_2644 [Corynebacterium glutamicum R]
 gi|21325513|dbj|BAC00135.1| Exonuclease III [Corynebacterium glutamicum ATCC 13032]
 gi|41326919|emb|CAF20763.1| EXODEOXYRIBONUCLEASE III [Corynebacterium glutamicum ATCC 13032]
 gi|140846660|dbj|BAF55659.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 263

 Score =  186 bits (471), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 71/267 (26%), Positives = 120/267 (44%), Gaps = 11/267 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +  WNVNS R R+  +  ++  ++ D++ +QETK +D+ FP E    + Y +   G  
Sbjct: 1   MRIVNWNVNSARTRVDRMVDFLLRHDVDVLAVQETKCKDEQFPTERFTEIGYEVAHFGLN 60

Query: 64  SYNGVAILSKYQPIEIVTHL-----PGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
            +NGVAI+S+     + TH         D+  +              +++ +LY+P+G  
Sbjct: 61  QWNGVAIISRVGIENVETHFPAQPGFNKDITKEQSIEARAIGARCGGVQVWSLYVPNGRE 120

Query: 119 ITSTKYDDKISWIK--RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
           I    YD K+ W+   R     +     EE L+  GD+NI P   D ++   +E     T
Sbjct: 121 IADPHYDYKLRWLFSLRNYVIDTLEYRPEEKLVLLGDFNIAPTDIDVWDIAAFEGKTHVT 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
              R +     +      ++ T      Y++WDY    + K +G+RID  + SP   +  
Sbjct: 181 EPERAA----FDGLIEAGLKETTPGPGTYTYWDYKGARFLKGEGMRIDFQLASPALAATA 236

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263
               +D + R  T  SDH PVIV   +
Sbjct: 237 GETFVDVEERSGTGASDHAPVIVDYKV 263


>gi|261408787|ref|YP_003245028.1| exodeoxyribonuclease III Xth [Paenibacillus sp. Y412MC10]
 gi|261285250|gb|ACX67221.1| exodeoxyribonuclease III Xth [Paenibacillus sp. Y412MC10]
          Length = 250

 Score =  186 bits (471), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 68/261 (26%), Positives = 109/261 (41%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      +  E + DI C+QETK +      +       +     +
Sbjct: 1   MKLVSWNVNGLRACVTKGFMDYFNEADADIFCVQETKLQAGQIELDLGPEYQQYWNYAEK 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G A+ ++  P+ +   L  D                   +   N           +
Sbjct: 61  KGYSGTAVFTRIAPLSVRYGLEEDSEPEGRVITLEFEGFYLVNVYTPNA------KRDLS 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           + D ++ W +RF  +  Q L+  +P+I  GD N+  Q  D  N      ++ FTLE R  
Sbjct: 115 RLDYRLEWEERFRTYLLQ-LDERKPVIVCGDLNVAHQEIDLKNAKSNHGNSGFTLEERGK 173

Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
              L   GF D+ R  +     +YS+W Y A    +N G RID+ + S      L  A I
Sbjct: 174 MTDLLAAGFIDSFRHFYPDRTDVYSWWSYMAKVRERNIGWRIDYFLTSARLAEKLKDAEI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
           D    G    SDH PV ++L+
Sbjct: 234 DCHVLG----SDHCPVSLTLE 250


>gi|114707701|ref|ZP_01440596.1| putative exodeoxyribonuclease iii protein [Fulvimarina pelagi
           HTCC2506]
 gi|114536945|gb|EAU40074.1| putative exodeoxyribonuclease iii protein [Fulvimarina pelagi
           HTCC2506]
          Length = 267

 Score =  186 bits (471), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 77/265 (29%), Positives = 123/265 (46%), Gaps = 9/265 (3%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64
           + TWN+NS+R R  ++  ++K   PD++CLQETK  ++ FP    + L Y H+   GQK 
Sbjct: 5   LTTWNINSVRLRAESVVKFLKMEQPDVLCLQETKCTNEQFPHAAFEGLGYDHVALHGQKG 64

Query: 65  YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124
           Y+GVA+LSK    ++V           AR +     +  + +R+ NLY+P G      + 
Sbjct: 65  YHGVAVLSKLPFEDVVR--QDFCEVGDARHLSVKLKVADRAIRVHNLYVPAGGDEPDAEV 122

Query: 125 DDKISWIKRFLRFASQRLELEEPLI---FAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180
           + K     +F+    +     E  +     GD NI P   D ++          T  E  
Sbjct: 123 NPKFGHKLQFIEEMRKMRAEGEAGVSALLCGDLNIAPYESDVWSHKQMLKIVSHTPVETS 182

Query: 181 QSFQKLQNMGFTDAIRATHDTHHL-YSFWDYYADSW-SKNKGIRIDHIMLSPEATSLLHS 238
                +   G+TD +R         +++W Y A  W + N+G R+DH+  S +  + L  
Sbjct: 183 GLLTAMSEGGWTDLMRRHVPMEEKLFTWWSYRAKDWAASNRGRRLDHVWGSADLAARLSD 242

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263
             + T  RGW +PSDH PV  S  +
Sbjct: 243 VNVLTDARGWERPSDHVPVTASFAL 267


>gi|255280445|ref|ZP_05345000.1| exodeoxyribonuclease III [Bryantella formatexigens DSM 14469]
 gi|255268910|gb|EET62115.1| exodeoxyribonuclease III [Bryantella formatexigens DSM 14469]
          Length = 253

 Score =  186 bits (471), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 69/264 (26%), Positives = 116/264 (43%), Gaps = 14/264 (5%)

Query: 3   VVT-VATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           ++  + +WNVN +RA +      + KE + DI C+QE+K ++       L+  + +    
Sbjct: 1   MMKKMISWNVNGLRACVQKGFLEYFKEADADIFCIQESKLQEGQIEL-PLEGYHQYWNYA 59

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+G A+ SK +P+ +   +  ++ D + R I   F                   + 
Sbjct: 60  KKKGYSGTAVFSKEEPLSVSYGIGIEEHDQEGRVITLEFDTYYLVTVYTPNSQNELARLP 119

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
                      +       + LE  +P+IF GD N+  +  D  NP     +A FT E R
Sbjct: 120 YRM------TWEEAFLAYLKGLEKNKPVIFCGDLNVAHKEIDLKNPKTNRKNAGFTDEER 173

Query: 181 QSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           + F ++   GF D  R  +     +YS+W Y   +  KN G RID+  +S      L  A
Sbjct: 174 EKFSQILENGFIDTYRYFYPEQEGVYSWWSYRFRAREKNAGWRIDYFCVSECLKDRLVDA 233

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
           RI T+  G    SDH PV + +++
Sbjct: 234 RIHTEITG----SDHCPVELQIEV 253


>gi|269798609|ref|YP_003312509.1| exodeoxyribonuclease III Xth [Veillonella parvula DSM 2008]
 gi|282849823|ref|ZP_06259207.1| exodeoxyribonuclease III [Veillonella parvula ATCC 17745]
 gi|294792738|ref|ZP_06757885.1| exodeoxyribonuclease III [Veillonella sp. 6_1_27]
 gi|269095238|gb|ACZ25229.1| exodeoxyribonuclease III Xth [Veillonella parvula DSM 2008]
 gi|282580760|gb|EFB86159.1| exodeoxyribonuclease III [Veillonella parvula ATCC 17745]
 gi|294456637|gb|EFG25000.1| exodeoxyribonuclease III [Veillonella sp. 6_1_27]
          Length = 251

 Score =  186 bits (471), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 68/262 (25%), Positives = 117/262 (44%), Gaps = 13/262 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +         E + DI CLQETK +      E L     +  +  +
Sbjct: 1   MKLISWNVNGLRAAVTKGFMESFNELDADIFCLQETKLQPDQISLE-LPGYEQYWNSAVK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G A+ ++ +P+ +   +  ++ D + R I A +                 +     
Sbjct: 60  KGYSGTAVFTRIKPLSVTNGIGIEEHDQEGRVITAEYDNFYL-----VCCYTPNSQRELA 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           + D +++W   F  +  + L+ ++P+I  GD N+  Q  D  NP     +A F+ E R  
Sbjct: 115 RLDYRMTWEDAFRNYLLE-LDKKKPVILCGDLNVAHQEIDLKNPKTNRKNAGFSDEERAK 173

Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             +L   GFTD  R  +      YS+W Y   +  +N G RID+ + S      +  A+I
Sbjct: 174 MTELLGAGFTDTFRHLYPDAIEQYSWWSYMGKARERNTGWRIDYFITSKRLDDKIQEAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
             +  G    SDH PV + +D+
Sbjct: 234 HQQIFG----SDHCPVELVIDL 251


>gi|224024813|ref|ZP_03643179.1| hypothetical protein BACCOPRO_01544 [Bacteroides coprophilus DSM
           18228]
 gi|224018043|gb|EEF76047.1| hypothetical protein BACCOPRO_01544 [Bacteroides coprophilus DSM
           18228]
          Length = 251

 Score =  186 bits (471), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 70/262 (26%), Positives = 113/262 (43%), Gaps = 13/262 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA          +  + D  CLQETK ++        +    +     +
Sbjct: 1   MKLISWNVNGLRACCDKGFREAFQTLDADFFCLQETKMQEGQLDLS-FEGYTSYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +  +P+ +   L  D  D + R I      N   + +       G      
Sbjct: 60  KGYSGTAIFTHLKPLNVTYGLGIDVHDHEGRVITLEMD-NFYLVTVYTPNSQDGLKRLDY 118

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +        +   R     L+ ++P++  GD N+  +  D  NP     +A FT + R+ 
Sbjct: 119 R-----MTWEDDFRNYLLELDKKKPVLVCGDLNVAHKEIDLKNPKTNRMNAGFTDQEREK 173

Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           FQ L + GF D  R  +     +YS+W Y   +  KN G RID+ + S      L SA+I
Sbjct: 174 FQILLDAGFIDTFRYFYPEQTGIYSWWSYRFKAREKNAGWRIDYFLASRRLADKLESAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
            T+  G    SDH PV V+L++
Sbjct: 234 HTEIFG----SDHCPVEVTLNV 251


>gi|118592059|ref|ZP_01549453.1| exodeoxyribonuclease III [Stappia aggregata IAM 12614]
 gi|118435355|gb|EAV42002.1| exodeoxyribonuclease III [Stappia aggregata IAM 12614]
          Length = 269

 Score =  186 bits (471), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 83/267 (31%), Positives = 120/267 (44%), Gaps = 9/267 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62
           + + TWN+NS+R R+  +   I E  PD+ICLQETK  D NFP    +   Y H+   GQ
Sbjct: 5   IKLVTWNINSVRLRMPIVEQLIDEVAPDVICLQETKCPDANFPENAFRKAGYEHMAIHGQ 64

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+GVA LS+     I            +R +      N  ++R+ N Y+P G      
Sbjct: 65  KGYHGVATLSRLPLSNIEKRDFCQVG--DSRHVAVDVPFNGSSIRLHNFYVPAGGDEPDR 122

Query: 123 KYDDKISWIKRFLRFASQRLELE---EPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-E 178
             + K      F+      L+ E   +P I  GD N+ P  HD ++          T  E
Sbjct: 123 TINPKFGHKLDFMNEMLGWLKGEETAKPAILVGDLNVAPYEHDVWSHKKLLKVVSHTPVE 182

Query: 179 VRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLL 236
                Q  +  G+ DA+R        LY++W Y A  W + +KG R+DH+ +S      +
Sbjct: 183 TELFEQVREAGGWLDAMRQFTPLDEKLYTWWSYRAKDWSAADKGRRLDHVWVSQPLAPHV 242

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263
               +    RGW KPSDH PVI    +
Sbjct: 243 KGTTVLRDARGWEKPSDHAPVIAEFAV 269


>gi|325105846|ref|YP_004275500.1| exodeoxyribonuclease III Xth [Pedobacter saltans DSM 12145]
 gi|324974694|gb|ADY53678.1| exodeoxyribonuclease III Xth [Pedobacter saltans DSM 12145]
          Length = 255

 Score =  186 bits (471), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 77/264 (29%), Positives = 122/264 (46%), Gaps = 13/264 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNF-PFETLQSLNYHIETCG 61
           + + ++NVN IRA I      W++  N D++CLQE K           L  L YH     
Sbjct: 1   MKIISYNVNGIRAAINKGWLDWLQATNADVVCLQEIKATPDQIQDIHKLSELGYHHFWYP 60

Query: 62  --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G AIL+K++P+ +      +  D + R I A F        + + Y P G+  
Sbjct: 61  AKKKGYSGTAILTKHEPLHVEYGCGIEAYDDEGRVIRADFE----KFSVISAYFPSGS-S 115

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +   K  ++  F  +A+  +     L+  GDYNI  +  D +NP    N + F  E 
Sbjct: 116 GDERQHFKYQFLADFEIYAADLMNTYPNLLICGDYNICHRAIDIHNPKSNANSSGFLPEE 175

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R+  ++  N GF D  R  +   H Y++W Y A + +KN G RID+ +LS      +  A
Sbjct: 176 REWMERFINSGFIDTFRHLNPDPHHYTWWSYRAGARAKNLGWRIDYHLLSSTMVENIKRA 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
            I  +     K SDH P+++ L  
Sbjct: 236 AILPEA----KHSDHCPILLELQW 255


>gi|192288715|ref|YP_001989320.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris TIE-1]
 gi|192282464|gb|ACE98844.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris TIE-1]
          Length = 270

 Score =  186 bits (471), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 78/268 (29%), Positives = 128/268 (47%), Gaps = 8/268 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62
           +T+ TWN+NS+R RI  +A ++K   PDI+CLQETK  D  FP +  + L Y H+   GQ
Sbjct: 3   LTLTTWNINSVRLRIDLVAKFLKAQRPDILCLQETKCPDDAFPLKRFKRLGYEHVALNGQ 62

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT-- 120
           K Y+GVA++SK   +        D +D +   +      N   L + N Y+P G  I   
Sbjct: 63  KGYHGVAVISKLPFVTTDIRTFCDIIDSRHISVSVKTDENAPPLVLHNFYVPAGGDIPDP 122

Query: 121 --STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL- 177
             + K+  K+S++             ++  I  GD N+ P  HD ++          T  
Sbjct: 123 AVNPKFKHKLSFLDEMKACEPLHPSGDQRHILVGDLNVAPHEHDVWSHKQLLKVVSHTPV 182

Query: 178 EVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSL 235
           E  +    L+   + D  R        +Y++W Y A  W+  ++G R+DHI +S      
Sbjct: 183 ECEKLLAVLRAGNWVDVARERIPLDQKVYTWWSYRAADWTVGDRGRRLDHIWVSEALKDR 242

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +   ++    R W +PSDH PV +++++
Sbjct: 243 VVDFKVLRDARSWERPSDHVPVTMTMEL 270


>gi|294794491|ref|ZP_06759627.1| exodeoxyribonuclease III [Veillonella sp. 3_1_44]
 gi|294454821|gb|EFG23194.1| exodeoxyribonuclease III [Veillonella sp. 3_1_44]
          Length = 251

 Score =  186 bits (471), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 68/262 (25%), Positives = 118/262 (45%), Gaps = 13/262 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +         E + DI CLQETK +      E L     +  +  +
Sbjct: 1   MKLISWNVNGLRAAVTKGFMESFNELDADIFCLQETKLQPDQISLE-LPGYEQYWNSAVK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G A+ ++ +P+ +   +  ++ D + R I A +                 +     
Sbjct: 60  KGYSGTAVFTRIKPLSVTNGIGIEEHDQEGRVITAEYDNFYL-----VCCYTPNSQRELA 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           + D +++W   F  +  + L+ ++P+I  GD N+  Q  D  NP +   +A F+ E R  
Sbjct: 115 RLDYRMTWEDAFRNYLLE-LDKKKPVILCGDLNVAHQEIDLKNPKMNRKNAGFSDEERAK 173

Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             +L   GFTD  R  +      YS+W Y   +  +N G RID+ + S      +  A+I
Sbjct: 174 MTELLGAGFTDTFRHLYPDAIEQYSWWSYMGKARERNTGWRIDYFITSKRLDDKIQEAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
             +  G    SDH PV + +D+
Sbjct: 234 HQQIFG----SDHCPVELVIDL 251


>gi|303229843|ref|ZP_07316620.1| exodeoxyribonuclease III [Veillonella atypica ACS-134-V-Col7a]
 gi|303231217|ref|ZP_07317955.1| exodeoxyribonuclease III [Veillonella atypica ACS-049-V-Sch6]
 gi|302514124|gb|EFL56128.1| exodeoxyribonuclease III [Veillonella atypica ACS-049-V-Sch6]
 gi|302515473|gb|EFL57438.1| exodeoxyribonuclease III [Veillonella atypica ACS-134-V-Col7a]
          Length = 251

 Score =  186 bits (471), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 67/262 (25%), Positives = 115/262 (43%), Gaps = 13/262 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +         E + DI CLQETK +      E L        +  +
Sbjct: 1   MKLISWNVNGLRAAVTKGFIDSFNELDADIFCLQETKLQPHQIELE-LPGYEQFWNSAVK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G A+ ++ +PI +   +  ++ D + R I A +                 +     
Sbjct: 60  KGYSGTAVFTRIKPIAVTNGIGIEEHDQEGRVITAEYDNFYL-----VCCYTPNSQRELA 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           + D +++W   F  +  + L+ ++P+I  GD N+     D  NP     +A F+ E R  
Sbjct: 115 RLDYRMTWEDAFRAYLLE-LDKKKPVILCGDLNVAHNEIDLKNPKTNRKNAGFSDEERAK 173

Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             +L   GFTD  R  +      YS+W Y   +  +N G RID+ + S      +  A+I
Sbjct: 174 MTELLESGFTDTFRYLYPDAVDEYSWWSYMGKARDRNVGWRIDYFITSKRLDDKIKEAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
             +  G    SDH PV + +++
Sbjct: 234 HQQIFG----SDHCPVELDIEL 251


>gi|227823661|ref|YP_002827634.1| exodeoxyribonuclease III [Sinorhizobium fredii NGR234]
 gi|227342663|gb|ACP26881.1| exodeoxyribonuclease III [Sinorhizobium fredii NGR234]
          Length = 268

 Score =  186 bits (471), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 73/266 (27%), Positives = 109/266 (40%), Gaps = 6/266 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +++ATWN+NS+R R+  +   +    PDI+CLQETK  D  FP   L+ L Y       +
Sbjct: 3   LSIATWNINSVRLRMPLVEHLLVNWQPDILCLQETKCPDDQFPSAPLKKLGYKYIEMHGQ 62

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
                       P+  +T          AR +   F I  +T+R+ N Y+P G       
Sbjct: 63  KGYHGVATISRLPLTELTDRRNYCGVGDARHLSVVFAIGGKTVRLHNFYVPAGGDEPDRT 122

Query: 124 YDDKISWIKRFLRFASQRL---ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
            + K      F+          E     I  GD NI P  HD ++          T    
Sbjct: 123 INPKFGHKLDFVDEMKLLHAEAEAGISSILVGDLNIAPLEHDVWSHKQLLKIVSHTPVET 182

Query: 181 QSFQKLQNMGFTDAIRATH--DTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLLH 237
                +   G    +   H      LY++W Y A  W+  ++G R+DHI  S +  + L 
Sbjct: 183 DGLTTVMTGGAWVDLMRQHTPPPEKLYTWWSYRAKDWAAVDRGRRLDHIWSSADLAAKLL 242

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263
              I  + RGW +PSDH PVI   ++
Sbjct: 243 RVDILREARGWERPSDHVPVIAHFEL 268


>gi|115522424|ref|YP_779335.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris BisA53]
 gi|115516371|gb|ABJ04355.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris BisA53]
          Length = 270

 Score =  186 bits (471), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 80/270 (29%), Positives = 123/270 (45%), Gaps = 10/270 (3%)

Query: 4   VT--VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETC 60
           +   + TWN+NS+R RI  +A  ++   PD++CLQETK  D  FP +  + L Y H+   
Sbjct: 1   MRFTLTTWNINSVRLRIDLVAKLLEAEQPDVLCLQETKCPDDAFPLKRFKQLGYEHVALN 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           GQK Y+GVA++SK    E       D+LD +   +          L + N Y+P G  I 
Sbjct: 61  GQKGYHGVAVVSKIPFAETHIRSFCDNLDSRHISVSFAAEHTQAPLVLHNFYVPAGGDIP 120

Query: 121 ----STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
               + K+  K+S++           + E   I  GD N+ P  HD ++          T
Sbjct: 121 DPELNPKFSHKLSFLDEMKACEPLHPQGEARHILVGDLNVAPHEHDVWSHKQLLKVVSHT 180

Query: 177 L-EVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWS-KNKGIRIDHIMLSPEAT 233
             E  +     Q   + D  R        +Y++W Y A  W+  ++G R+DHI +S    
Sbjct: 181 PIECDKLLAAQQYGNWIDVARDRIPLDQKVYTWWSYRAADWTVGDRGRRLDHIWVSKALQ 240

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           S +    I    RGW +PSDH PV    ++
Sbjct: 241 SHVQDFNILRDARGWERPSDHVPVTAVFEL 270


>gi|302336916|ref|YP_003802122.1| exodeoxyribonuclease III Xth [Spirochaeta smaragdinae DSM 11293]
 gi|301634101|gb|ADK79528.1| exodeoxyribonuclease III Xth [Spirochaeta smaragdinae DSM 11293]
          Length = 259

 Score =  185 bits (470), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 60/266 (22%), Positives = 118/266 (44%), Gaps = 15/266 (5%)

Query: 1   MSVV--TVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-- 55
           +  +   +A+WNVN IRA     L  ++ + + D++CLQETK + +    + L   +Y  
Sbjct: 2   LKTMETRIASWNVNGIRAAQKKGLLEYMMQEHADVVCLQETKAKPEQLDEQLLNPSDYRS 61

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
           +  +  +  Y+GVA+ S+ +P+ +        L +     E    +   +  +       
Sbjct: 62  YFSSAERGGYSGVAVYSRKKPLSVS------PLGIAEFDAEGRALLVEFSDFVLINGYFP 115

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
            +     + D K+++    L+  +  +     ++  GDYNI  +P D   P   E +  F
Sbjct: 116 NSQSEGARLDYKLAYCDAILKRCNSLVGEGRHVVVCGDYNIAHKPIDLARPKENEGNPGF 175

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
             E R       + G+TD  R  ++    Y++W Y      +N G R+D+     E  + 
Sbjct: 176 LPEERAWMSSFLDAGYTDTFRIFNNEGGNYTWWSYRTKGRERNVGWRLDYFCTDKEFENR 235

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
           + ++ I ++  G    SDH PV++++
Sbjct: 236 VKNSEIRSEVMG----SDHCPVVLTI 257


>gi|288556715|ref|YP_003428650.1| exodeoxyribonuclease [Bacillus pseudofirmus OF4]
 gi|288547875|gb|ADC51758.1| exodeoxyribonuclease [Bacillus pseudofirmus OF4]
          Length = 251

 Score =  185 bits (470), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 68/262 (25%), Positives = 117/262 (44%), Gaps = 13/262 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      +  E N DI CLQETK ++     E L   +       +
Sbjct: 1   MKLISWNVNGLRACVKKGFLDFFHEQNADIFCLQETKLQEGQIELE-LDGYHQFWNYALK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G A+ +K +PI +   +   + + + R I   F     +  + N+Y  +     S 
Sbjct: 60  KGYSGTAVFTKQKPISVRYGVGELESEDEGRIITLEFD----SFYLVNVYTINAKRDLSR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
             +         L+     L+  +P+++ GD N+     D  N      ++ FTLE R  
Sbjct: 116 LPERLEWE--DALKEYLLDLDRHKPVVYCGDLNVAHAEVDLKNARSNHGNSGFTLEERGK 173

Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
              L   GF D+ R  +      +++W Y  D  ++N G RID+ ++S +    ++ A I
Sbjct: 174 MTTLLESGFIDSFRYLYPERTDAFTWWSYMRDVRARNIGWRIDYFIVSTQLKEKINEASI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
             +  G    SDH P+ + LDI
Sbjct: 234 YAEVLG----SDHCPIGLELDI 251


>gi|320528523|ref|ZP_08029680.1| exodeoxyribonuclease III [Solobacterium moorei F0204]
 gi|320131109|gb|EFW23682.1| exodeoxyribonuclease III [Solobacterium moorei F0204]
          Length = 251

 Score =  185 bits (470), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 61/262 (23%), Positives = 114/262 (43%), Gaps = 13/262 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFET-LQSLNYHIETCG 61
           +   +WNVN +RA +    A +  E + D   LQETK +          +  + ++ +  
Sbjct: 1   MKFISWNVNGLRAAMKKGFADFFHEQDADFFALQETKMQPDQLEDAMKFEGYHMYMNSAE 60

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G  I +K++P+ +   + GD                     + N      +    
Sbjct: 61  RKGYSGTLIYTKHEPLSVTYEIEGDVTKEGRVITLEYPDFYFVCAYVPN------SKDGL 114

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            +   +I   +  LR     L+ ++P+I+ GD N+  +  D  NP     +  F+ E R 
Sbjct: 115 LRLPYRI-EWEEMLRKHLMELDKKKPVIYTGDLNVAHEEIDLKNPATNHKNPGFSDEERA 173

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           +  KL + GF+D  R  +     +S+W Y   +  +N G RID+ ++S    + +  A I
Sbjct: 174 AMTKLLDSGFSDTFRELYPDTQKFSWWSYRMKARERNVGWRIDYFLVSERLLANVQDALI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
             +  G    SDH PV +++++
Sbjct: 234 FDETEG----SDHCPVGLNINL 251


>gi|16265144|ref|NP_437936.1| exodeoxyribonuclease III protein [Sinorhizobium meliloti 1021]
 gi|15141283|emb|CAC49796.1| probable exodeoxyribonuclease III protein [Sinorhizobium meliloti
           1021]
          Length = 257

 Score =  185 bits (470), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 98/257 (38%), Positives = 150/257 (58%), Gaps = 5/257 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+N+N +  R+  L  W+    PD++CLQE K  D  FP   +++  Y     GQ 
Sbjct: 1   MKIATFNINGVNKRLDILLTWLGTAEPDVVCLQELKATDGQFPRAAIEAAGYGAVWRGQA 60

Query: 64  SYNGVAILSKYQ-PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           ++NGVAIL++ + P+   T LPGD  D Q+R+IEA        + I +LY P+GNP    
Sbjct: 61  AWNGVAILARDREPVLTRTGLPGDSSDTQSRYIEAAVNG----ILIASLYAPNGNPQPGP 116

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           K+D K++W  RF + A+  LE   P++ AGDYN++P+P D Y    ++++A    E R +
Sbjct: 117 KFDYKLAWHLRFNQHAAALLETGVPVVLAGDYNVVPEPRDIYPTRSYDDNALVQPESRAA 176

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F+ L + G+ DA+R  H    L++FWDY  + W ++ G+R+DHI+LS +    L  A ID
Sbjct: 177 FRSLVDQGWLDALRKIHPKEELFTFWDYRRNRWQRDAGLRLDHILLSRKLRRRLTGAGID 236

Query: 243 TKPRGWTKPSDHTPVIV 259
            + R     SDH PV V
Sbjct: 237 REIRALEGSSDHAPVWV 253


>gi|217976524|ref|YP_002360671.1| exodeoxyribonuclease III Xth [Methylocella silvestris BL2]
 gi|217501900|gb|ACK49309.1| exodeoxyribonuclease III Xth [Methylocella silvestris BL2]
          Length = 270

 Score =  185 bits (470), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 82/265 (30%), Positives = 121/265 (45%), Gaps = 8/265 (3%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64
           +ATWN+NS+R RI  +A ++ E+ PD++CLQETK  D  FP      L Y H+E  GQK 
Sbjct: 5   IATWNINSVRLRIDLVARFLNEHAPDLLCLQETKCRDAEFPLSAFHKLGYPHVEINGQKG 64

Query: 65  YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124
           Y+GVAI S+    +I      +  D +   +  T     + +R+ N Y+P G        
Sbjct: 65  YHGVAIASRLPLGDIDRRGFCEKGDARHLAVSFTPQGAARPVRLHNFYVPAGGDEPDPLI 124

Query: 125 DDKISWIKRFLRFASQRLELE----EPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
           + K +    FL   +  +          I  GD NI P   D ++          T    
Sbjct: 125 NPKFAHKLAFLDEMAAWMHHGAIAASDAILVGDLNIAPLEADVWSHKALLRVVSHTPIEV 184

Query: 181 QSFQKLQNM--GFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLH 237
           + F   Q          R       LY++W Y A  W+   +G R+DH+++S      L 
Sbjct: 185 EKFGVFQQAGPWVDAMRRYVPPEEKLYTWWSYRARDWALSGRGRRLDHVLVSESLAPRLG 244

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLD 262
             ++ T+ RGW +PSDH PVIV  D
Sbjct: 245 GMKVLTESRGWERPSDHVPVIVRFD 269


>gi|315652833|ref|ZP_07905807.1| exodeoxyribonuclease III [Eubacterium saburreum DSM 3986]
 gi|315485035|gb|EFU75443.1| exodeoxyribonuclease III [Eubacterium saburreum DSM 3986]
          Length = 259

 Score =  185 bits (470), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 71/265 (26%), Positives = 125/265 (47%), Gaps = 15/265 (5%)

Query: 1   MSVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           M  +   +WNVN +RA +      + ++ + DI C+QE+K  +     +     +Y    
Sbjct: 8   MKKM--ISWNVNGLRAAVTKGFLDFFRDIDADIFCIQESKLSEGQIELDLPGYYDY-WNY 64

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GVA+ +K +PI +   +  D+ D + R I A +                 +  
Sbjct: 65  ATKKGYSGVAVFTKDKPINVTYGIGIDEHDNEGRVITAEYDEFYLI-----TCYTPNSQR 119

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
             T+ D +++W   F    + +LE ++P+IF GD N+  +  D  NP     +A FT E 
Sbjct: 120 GLTRLDYRMTWEDAF-LDYALKLEEKKPVIFCGDLNVAHKEIDLKNPKTNRKNAGFTDEE 178

Query: 180 RQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R     + + GF D+ R  +      YS+W Y   + +KN G RID+ ++S +    +  
Sbjct: 179 RAKMDIILSSGFVDSFRLLYPDKTDAYSWWSYMGGARAKNVGWRIDYFIVSAKLKDRIKE 238

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263
           A+I ++  G    SDH PV + ++I
Sbjct: 239 AKIHSEVLG----SDHCPVELDIEI 259


>gi|239624599|ref|ZP_04667630.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239520985|gb|EEQ60851.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 251

 Score =  185 bits (470), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 71/260 (27%), Positives = 120/260 (46%), Gaps = 13/260 (5%)

Query: 5   TVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
              +WNVN +RA +      + KE + D+ C+QE+K ++     + L   + +     +K
Sbjct: 3   KFISWNVNGLRACVGKGFLDFFKEIDADVFCIQESKLQEGQIDLD-LPGYHQYWNYALKK 61

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            Y+G A+ ++ +P+ +   +  ++ D + R I A F                 +     +
Sbjct: 62  GYSGTAMFTREEPLSVSYGIGMEEHDTEGRVITAEFPD-----YYVVTCYTPNSQDGLAR 116

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
            D ++ W   FL +    LE ++P++F GD N+  +  D  NP     +A FT E R  F
Sbjct: 117 LDYRMKWEDDFLAYLKG-LEKKKPVVFCGDLNVAHKEIDLKNPKTNRKNAGFTDEERGKF 175

Query: 184 QKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
             L + GF D  R  +     +YS+W Y   + +KN G RID+  +S      L SA I 
Sbjct: 176 TDLLSAGFIDTFRYFYPDAEGIYSWWSYRFSARAKNAGWRIDYFCVSESLKDRLVSAAIH 235

Query: 243 TKPRGWTKPSDHTPVIVSLD 262
           T+  G    SDH PV + ++
Sbjct: 236 TEVMG----SDHCPVELVME 251


>gi|58584986|ref|YP_198559.1| exonuclease III [Wolbachia endosymbiont strain TRS of Brugia
           malayi]
 gi|58419302|gb|AAW71317.1| Exonuclease III [Wolbachia endosymbiont strain TRS of Brugia
           malayi]
          Length = 260

 Score =  185 bits (470), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 88/256 (34%), Positives = 147/256 (57%), Gaps = 1/256 (0%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           ++ +ATWNVNSIR R+  L ++I ++  DII LQE K  ++ FP+  ++ L Y     G+
Sbjct: 1   MLKIATWNVNSIRKRVDQLCSFIVDDQIDIILLQEIKCTEEQFPYVEIEKLGYECIVYGE 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
            + NGV +LSK+  +E    +   +   +AR+IE     N Q +R+ ++Y+P+G  + S 
Sbjct: 61  VARNGVCVLSKHPILEKFK-IDIVEGYQEARYIECLIKHNNQKMRVVSIYVPNGQSLGSH 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
            ++ K+ ++          L+ EE ++ AGDYN+ P   D ++P +     CF ++ R+ 
Sbjct: 120 VFEYKLKFLDNLYERMDNLLKNEELIVIAGDYNVAPDEIDVFDPTLLNGQVCFHIKEREK 179

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
            + + N+GF DA R +H     +S+W Y  +S   N+G+RIDH++LSP+A   L    ID
Sbjct: 180 LKAILNLGFKDAFRMSHPNLQQFSWWRYQGNSLRNNQGMRIDHMLLSPQAVDKLGICYID 239

Query: 243 TKPRGWTKPSDHTPVI 258
            + R    PSDHTP++
Sbjct: 240 DRLRKLENPSDHTPIV 255


>gi|307320300|ref|ZP_07599718.1| exodeoxyribonuclease III Xth [Sinorhizobium meliloti AK83]
 gi|306894022|gb|EFN24790.1| exodeoxyribonuclease III Xth [Sinorhizobium meliloti AK83]
          Length = 257

 Score =  185 bits (470), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 98/257 (38%), Positives = 150/257 (58%), Gaps = 5/257 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+N+N +  R+  L  W+    PD++CLQE K  D  FP   +++  Y     GQ 
Sbjct: 1   MKIATFNINGVNKRLDILLTWLGTAEPDVVCLQELKATDGQFPRAAIEAAGYGAVWRGQA 60

Query: 64  SYNGVAILSKYQ-PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           ++NGVAIL++ + P+   T LPGD  D Q+R+IEA        + I +LY P+GNP    
Sbjct: 61  AWNGVAILARDREPVLTRTGLPGDSSDTQSRYIEAAVNG----ILIASLYAPNGNPQPGP 116

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           K+D K++W  RF + A+  LE   P++ AGDYN++P+P D Y    ++++A    E R +
Sbjct: 117 KFDYKLAWHLRFNQHAAALLETGVPVVLAGDYNVVPEPRDIYPTRSYDDNALVQPESRAA 176

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F+ L + G+ DA+R  H    L++FWDY  + W ++ G+R+DHI+LS +    L  A ID
Sbjct: 177 FRSLVDQGWLDALRKIHPKEQLFTFWDYRRNRWQRDAGLRLDHILLSRKLRRRLTGAGID 236

Query: 243 TKPRGWTKPSDHTPVIV 259
            + R     SDH PV V
Sbjct: 237 REIRALEGSSDHAPVWV 253


>gi|198276716|ref|ZP_03209247.1| hypothetical protein BACPLE_02915 [Bacteroides plebeius DSM 17135]
 gi|198270241|gb|EDY94511.1| hypothetical protein BACPLE_02915 [Bacteroides plebeius DSM 17135]
          Length = 252

 Score =  185 bits (470), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 72/263 (27%), Positives = 121/263 (46%), Gaps = 13/263 (4%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++ + +WNVN +RA           + + D  CLQETK ++        +    +     
Sbjct: 1   MIKLISWNVNGLRACCDKGFRDIFTQLDADFFCLQETKMQEGQLDLS-FEGYTSYWNYAE 59

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G AI +K+QP+++   L  D+ D + R I                     +    
Sbjct: 60  KKGYSGTAIFTKHQPLQVTYGLGIDEHDHEGRVITLEMEKF-----FLVTVYTPNSQDGL 114

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            + D +++W   F  +  Q+L+  +P++  GD N+  +  D  NP     +A FT + R+
Sbjct: 115 KRLDYRMTWDDDFRAY-LQKLDQSKPVLVCGDLNVAHKEIDLKNPKTNRMNAGFTDQERE 173

Query: 182 SFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            FQ L + GF D  R  +    ++YS+W Y   +  KN G RID+ + S      L  A+
Sbjct: 174 KFQLLLDAGFIDTFRYFYPEQTNIYSWWSYRFKAREKNAGWRIDYFLASASLADKLKEAK 233

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263
           I T+  G    SDH PV V+++I
Sbjct: 234 IHTEIFG----SDHCPVEVTVEI 252


>gi|325954395|ref|YP_004238055.1| exodeoxyribonuclease III Xth [Weeksella virosa DSM 16922]
 gi|323437013|gb|ADX67477.1| exodeoxyribonuclease III Xth [Weeksella virosa DSM 16922]
          Length = 255

 Score =  185 bits (470), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 80/263 (30%), Positives = 129/263 (49%), Gaps = 13/263 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60
           + + ++NVN IRA +   L  W++  NPDI C+QETK + +      +Q+L Y  +  + 
Sbjct: 1   MKIISYNVNGIRAALRKGLTEWLRVANPDIFCVQETKAQPEQVDISEIQALGYTAYWHSA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GVAI SK QP  +      D +D + R I   F        + +LYLP G  + 
Sbjct: 61  QRKGYSGVAIFSKIQPKNVEIGTGIDYIDHEGRVIRLDFD----QFSVISLYLPSGTNME 116

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
               D K+ + + FL +     +    L+ AGDYNI  +  D ++PI     + F    R
Sbjct: 117 ER-LDFKLQFCEDFLNYIRNLKQNIPNLVIAGDYNICHEAIDIHDPICNAKVSGFLPVER 175

Query: 181 QSFQKLQNMGFT-DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
               +  +     D+ R      H Y++W Y A++ + NKG RID+ M+S +  + +   
Sbjct: 176 DWMTRFIDQCEMIDSYRFFVKEPHHYTWWSYRANARANNKGWRIDYHMVSHQLKNNIKRV 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
            I T+     K SDH P++V L+
Sbjct: 236 GILTEA----KHSDHCPILVELE 254


>gi|304439168|ref|ZP_07399086.1| exodeoxyribonuclease III [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304372300|gb|EFM25888.1| exodeoxyribonuclease III [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 254

 Score =  185 bits (470), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 70/265 (26%), Positives = 114/265 (43%), Gaps = 13/265 (4%)

Query: 1   MSVVTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           M      +WNVN IRA +        +E NPDII LQE K  +     E +   + +   
Sbjct: 1   MMTKKFVSWNVNGIRAALKKGFMESFEELNPDIIGLQEIKLSEGQLDLE-IPGYHMYWNY 59

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G A+ ++ +P+ +   +  ++ D + R I   +                 +  
Sbjct: 60  AEKKGYSGTAVFTREEPLSVSYGIGIEEHDKEGRVITLEYPE-----YYFITCYTPNSQR 114

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              + D ++ W + F      RL+  +P++  GD N+     D  NP     +A F+ E 
Sbjct: 115 GLARLDYRMEWEEAF-LEYLNRLDEVKPVVLCGDLNVAHNEIDLKNPESNRKNAGFSDEE 173

Query: 180 RQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R  F KL   G+TD  R  +      YS+W Y+  +  +N G RID+ ++S      +  
Sbjct: 174 RDKFTKLLEAGYTDTFRYLYPDKEDEYSWWSYFRQARDRNIGWRIDYFVVSKVLEDKIVE 233

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263
           A I     G    SDH PV V L++
Sbjct: 234 ASIHQNIMG----SDHCPVSVELNL 254


>gi|254491099|ref|ZP_05104280.1| exodeoxyribonuclease III [Methylophaga thiooxidans DMS010]
 gi|224463612|gb|EEF79880.1| exodeoxyribonuclease III [Methylophaga thiooxydans DMS010]
          Length = 259

 Score =  185 bits (470), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 72/268 (26%), Positives = 114/268 (42%), Gaps = 13/268 (4%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + T NVN IRA        W+ + N D++C+QETK +             YH      
Sbjct: 1   MRIITVNVNGIRAAARKGFFDWLLKQNADVVCIQETKAQIHQLEDAVFTPQGYHCFYHDA 60

Query: 62  -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GVA+  + +P E++  +   + DV+ R+IEA F      L + +LY+P G+   
Sbjct: 61  EKKGYSGVALYCRSEPDEVIVGMDNPEFDVEGRYIEARFG----KLSVISLYMPSGSSKE 116

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +           ++    +       +  GD+NI  +  D  N      ++ F  E R
Sbjct: 117 ERQQVKYRCMDFFEIKMQEMKAS-GRDYVITGDWNIAHKNEDIRNWKGNLKNSGFLPEER 175

Query: 181 QSFQK-LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
               K    MGF DA R      H Y++W     +W+ N G RID+ +LSP     + + 
Sbjct: 176 AWLDKLFDEMGFVDAFRELPQQEHEYTWWSNRGQAWANNVGWRIDYHILSPSMKGTVKAT 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPR 267
            I    R     SDH P+ +  D   P 
Sbjct: 236 DIYRDER----FSDHAPLTIDYDYAMPE 259


>gi|296119006|ref|ZP_06837579.1| exodeoxyribonuclease III [Corynebacterium ammoniagenes DSM 20306]
 gi|295968104|gb|EFG81356.1| exodeoxyribonuclease III [Corynebacterium ammoniagenes DSM 20306]
          Length = 269

 Score =  185 bits (470), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 71/267 (26%), Positives = 128/267 (47%), Gaps = 8/267 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+NS+R R       + +++ D++CLQETK  D  FP E  +   YH+   G  
Sbjct: 1   MRIATWNINSVRTRGERALNLMDKHDIDVLCLQETKVADDKFPRELFEDAGYHVVFHGLN 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT-----QTLRIGNLYLPHGNP 118
            +NGVAI+S+ +P E++T  P           E            + + I +LY+P+G  
Sbjct: 61  QWNGVAIVSREEPSEVITGFPEQPGYHNDEDKEQAPEARALGAVIRNVEIWSLYVPNGRE 120

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
           IT   YD K+ ++    R+A  +   +  L+  GD+NI P+  D ++  ++      T E
Sbjct: 121 ITQRHYDYKLDFLYALARYAEGKKREK--LLLTGDFNIAPRNEDVWDLELFRGKTHVT-E 177

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
             ++  +       + +   +     ++++DY +  + K++G+RID  M +      +  
Sbjct: 178 PERAAFQRLEEAGLEEVTRQYTEKDRWTYFDYKSMRFQKDEGMRIDFQMATKSLAEKVTG 237

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           A +D K R     SDH  +    D+P+
Sbjct: 238 AGLDRKERAEKGTSDHLLLWADFDLPD 264


>gi|310643609|ref|YP_003948367.1| exodeoxyribonuclease iii xth [Paenibacillus polymyxa SC2]
 gi|309248559|gb|ADO58126.1| Exodeoxyribonuclease III Xth [Paenibacillus polymyxa SC2]
          Length = 254

 Score =  185 bits (470), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 72/260 (27%), Positives = 116/260 (44%), Gaps = 13/260 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      ++KE + DI C+QETK ++     E ++    +     +
Sbjct: 1   MKLISWNVNGLRACVTKGFYTYLKETDADIFCVQETKLQEGQILMENMEEYAQYWNYAEK 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +P+ +   L  ++                  +   N           +
Sbjct: 61  KGYSGTAIFTKIKPLSVHYGLEENEEPEGRTITLEFEKFYLVNVYTPNT------KRDLS 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +   ++ W  RF  +  Q+L+ ++P+I  GD N+  Q  D  N      +A FT E R  
Sbjct: 115 RLPYRLEWEDRFRSY-LQQLDAQKPVIICGDLNVAHQEIDLKNAKANYGNAGFTPEERDR 173

Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             +L N GF D  R  +     +YS+W Y      +N G RID+ ++S     LL  A I
Sbjct: 174 MSQLLNAGFIDTFRYFYPDRTDVYSWWSYMPKVRERNIGWRIDYFLVSERLRPLLMDASI 233

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
           D    G    SDH PVI+ L
Sbjct: 234 DCHITG----SDHCPVILDL 249


>gi|307308870|ref|ZP_07588558.1| exodeoxyribonuclease III Xth [Sinorhizobium meliloti BL225C]
 gi|306900675|gb|EFN31287.1| exodeoxyribonuclease III Xth [Sinorhizobium meliloti BL225C]
          Length = 257

 Score =  185 bits (470), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 99/257 (38%), Positives = 150/257 (58%), Gaps = 5/257 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+N+N +  R+  L  W+    PD++CLQE K  D  FP   +++  Y     GQ 
Sbjct: 1   MKIATFNINGVNKRLDILLTWLGTAEPDVVCLQELKATDGQFPRAAIEAAGYGAVWRGQA 60

Query: 64  SYNGVAILSKYQ-PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           ++NGVAIL++ + P+   T LPGD  D Q+R+IEA        + I +LY P+GNP    
Sbjct: 61  AWNGVAILARDREPVLTRTGLPGDSSDTQSRYIEAAVNG----ILIASLYAPNGNPQPGP 116

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           K+D K++W  RF + A+  LE   P++ AGDYNI+P+P D Y    ++++A    E R +
Sbjct: 117 KFDYKLAWHLRFNQHAAALLETGVPVVLAGDYNIVPEPRDIYPTRSYDDNALVQPESRAA 176

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F+ L + G+ DA+R  H    L++FWDY  + W ++ G+R+DHI+LS +    L  A ID
Sbjct: 177 FRSLVDQGWLDALRKIHPKEQLFTFWDYRRNRWQRDAGLRLDHILLSRKLRRRLTGAGID 236

Query: 243 TKPRGWTKPSDHTPVIV 259
            + R     SDH PV V
Sbjct: 237 REIRALEGSSDHAPVWV 253


>gi|227535760|ref|ZP_03965809.1| exodeoxyribonuclease III [Sphingobacterium spiritivorum ATCC 33300]
 gi|227244248|gb|EEI94263.1| exodeoxyribonuclease III [Sphingobacterium spiritivorum ATCC 33300]
          Length = 255

 Score =  185 bits (470), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 72/262 (27%), Positives = 116/262 (44%), Gaps = 13/262 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPF-ETLQSLNY--HIET 59
           + + T+NVN +RA +      W+K  N D+ICLQE K      P    L+ L +  +   
Sbjct: 1   MKIITYNVNGLRAALKKGWLDWLKSTNADVICLQEIKATPDLIPEIALLEQLGFEHYWYP 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G AI +K  P  +      +  D + R I A F   +                
Sbjct: 61  AQKKGYSGTAIFTKVSPKRVEYGCGHELYDFEGRIIRADFEKFSVMST-----YFPSGTT 115

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +   K  ++  F +++ + L+    LI  GDYNI  +  D +NP    N + F  E 
Sbjct: 116 GEARQTFKYQFLDDFQQYSDRLLKDIPNLIVCGDYNICHRAIDIHNPKSNANTSGFLPEE 175

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R+  +   N G+ D+ R  +   H YS+W Y A + ++N G RID+ M+S    S +  +
Sbjct: 176 REWMENFINSGYVDSFRHLNPEPHQYSWWSYRAGARARNLGWRIDYNMVSAPLASQIEKS 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261
            +          SDH PV+V +
Sbjct: 236 YLLNDA----VHSDHCPVVVEI 253


>gi|312147931|gb|ADQ30590.1| exodeoxyribonuclease III [Borrelia burgdorferi JD1]
          Length = 255

 Score =  185 bits (469), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 58/260 (22%), Positives = 105/260 (40%), Gaps = 12/260 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFE-TLQSLNYHIETCG 61
           + + +WNVN IRA +      ++KE  PDI+C+QETK   +  P +   ++   +     
Sbjct: 1   MKLISWNVNGIRAVLKKGFLEFVKEYTPDILCIQETKALREQLPKDLIFENYYSYFSNSK 60

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
            K Y+GV I SK +PI +         +     +            I        + +  
Sbjct: 61  IKGYSGVCIYSKVEPISVRLLGEEIFDNEGRGLVACYDDF------ILVNGYFPNSQVLR 114

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            +   K++++      A   +   + ++  GD+NI     D  +P    +   + +E   
Sbjct: 115 RRLGYKLNFLSYVENLADSLVCDGKNVVICGDFNIAHTEIDLISPDSNRDSPGYYIEETT 174

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
                 N G+ D  R  +     Y++W Y   +  +N G RID+ +++      +  + I
Sbjct: 175 WLDDFLNKGYVDTFRIFNKDPGYYTWWSYRTRARERNMGWRIDYFIVNEFFKRNVEKSLI 234

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
             K  G    SDH PV + L
Sbjct: 235 LDKVMG----SDHCPVFLEL 250


>gi|86747505|ref|YP_484001.1| exodeoxyribonuclease III [Rhodopseudomonas palustris HaA2]
 gi|86570533|gb|ABD05090.1| exodeoxyribonuclease III [Rhodopseudomonas palustris HaA2]
          Length = 270

 Score =  185 bits (469), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 81/271 (29%), Positives = 129/271 (47%), Gaps = 9/271 (3%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIET 59
           MS  T+ TWN+NS+R RI  +A ++K   PD++CLQETK  D  FP +  + L Y HI  
Sbjct: 1   MS-FTLTTWNINSVRLRIELVAKFLKAQRPDVLCLQETKCPDDAFPAKRFKRLGYEHIAL 59

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            GQK Y+GVA++SK   +        D++D +   +          L + N Y+P G  I
Sbjct: 60  NGQKGYHGVAVISKIPFLATDIRTFCDNIDSRHISVSLQTGAADPPLLLHNFYVPAGGDI 119

Query: 120 T----STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
                + K+  K+S++      A      +   I  GD N+ P  HD ++          
Sbjct: 120 PDPEANPKFKHKLSFLDEMRACAPLHPSGDARHILVGDLNVAPHEHDVWSHKQLLKVVSH 179

Query: 176 TL-EVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWS-KNKGIRIDHIMLSPEA 232
           T  E  +         + D  R     +  +Y++W Y A  W+  ++G R+DHI +S   
Sbjct: 180 TPVECDKLLAVQAAGNWVDVARERIPLSEKIYTWWSYRAADWTIGDRGRRLDHIWVSEAL 239

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            + +   +I    R W +PSDH PV V++++
Sbjct: 240 RARVTDFKILRDARSWERPSDHVPVTVTMEL 270


>gi|254282366|ref|ZP_04957334.1| exodeoxyribonuclease III [gamma proteobacterium NOR51-B]
 gi|219678569|gb|EED34918.1| exodeoxyribonuclease III [gamma proteobacterium NOR51-B]
          Length = 259

 Score =  185 bits (469), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 64/265 (24%), Positives = 115/265 (43%), Gaps = 13/265 (4%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + V T N N IRA       +W+ +   D++C+QETK +++    +      YH      
Sbjct: 1   MRVITCNTNGIRAAERKGFFSWLGQQGADVVCIQETKAQEQQLTDDAFYPEGYHCFYNDA 60

Query: 62  -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+G A+  + +P  ++T L  D  D + R+++A F      + + +LYLP G+   
Sbjct: 61  EKKGYSGTALYCRSKPQRVITSLGWDPADSEGRYLQADFPG----ISVVSLYLPSGS-SG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EV 179
             +   K  ++  F              I   D+NI  +  D  N      ++ F   E 
Sbjct: 116 DERQVRKEVFMDAFFDHLKALRRKRREFIICADWNICHREIDLKNWRANRKNSGFLPHER 175

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
               +    +G+ D+ R  +     Y++W     +W+KN G R+D+++++P       SA
Sbjct: 176 AWLDRVFDELGYVDSFRRVNPEPDQYTWWSNRGQAWAKNVGWRLDYMLVTPGLADAATSA 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIP 264
            I  + R     SDH P+ +   I 
Sbjct: 236 SIYREER----FSDHAPLTLDFAID 256


>gi|148245026|ref|YP_001219720.1| exodeoxyribonuclease III [Candidatus Vesicomyosocius okutanii HA]
 gi|146326853|dbj|BAF61996.1| exodeoxyribonuclease III [Candidatus Vesicomyosocius okutanii HA]
          Length = 256

 Score =  185 bits (469), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 66/265 (24%), Positives = 112/265 (42%), Gaps = 13/265 (4%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC- 60
           ++ + T NVN IRA        WIK  N D++CLQE K  ++    E      YH     
Sbjct: 1   MIRIITTNVNGIRAAERKGFLNWIKNQNADVVCLQEIKATEEQLD-ERFYPEEYHCYYQP 59

Query: 61  -GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G  I +K  PI+++     +       F      +N +   + ++Y+  G+  
Sbjct: 60  AQKKGYSGTTIFTKQTPIQVIK----ESPWKDINFEGRFIQVNFKNFSVISIYIHSGSAK 115

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
            + +        +RF+ +  +       +I  GD NI+ Q  D  N    + ++    E 
Sbjct: 116 QARQNLKMEFLTERFMPYLQELKISGRKVIICGDMNIVHQERDIKNWKANQKNSGCLPEE 175

Query: 180 RQSFQK-LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R    K    +GF D  R  +     Y++W     +W+ N G RID+ +L+P     + +
Sbjct: 176 RAWLDKLFFKVGFIDGFREVNQEDQQYTWWSNRGQAWANNIGWRIDYQILTPNLKGKVKN 235

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263
           A I    R     SDH P+I+   +
Sbjct: 236 ANIYKNKR----FSDHAPIIMDYQL 256


>gi|323340218|ref|ZP_08080482.1| exodeoxyribonuclease III [Lactobacillus ruminis ATCC 25644]
 gi|323092409|gb|EFZ35017.1| exodeoxyribonuclease III [Lactobacillus ruminis ATCC 25644]
          Length = 254

 Score =  185 bits (469), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 65/259 (25%), Positives = 111/259 (42%), Gaps = 13/259 (5%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +  N +   ++ + D  C+QETK ++     + L   + +     +
Sbjct: 1   MNFVSWNVNGLRAVLKKNFSEVFEKLDADFFCIQETKLQEGQVELD-LPGYHQYWNYAER 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K++P  +   +   + D + R I   +           +     N     
Sbjct: 60  KGYSGTAIFTKHEPQSVSYGIHNSEFDHEGRVITLEYA------SFYLVCCYSPNSQPKL 113

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           K  D     +         L+ ++P+I  GD N+  +  D  NP     +A F+ E R  
Sbjct: 114 KRLDFRMGFEDAFLNYLNDLKEKKPVIMCGDLNVAHEEIDLKNPKTNHRNAGFSNEERSC 173

Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             +L   G+ D  R  H     +YS+W Y  ++   N G RID+ ++S      L +A I
Sbjct: 174 MTRLLENGYLDTFRFFHPDETGIYSWWSYRFNARKNNAGWRIDYFIVSESLKDSLENAEI 233

Query: 242 DTKPRGWTKPSDHTPVIVS 260
            T   G    SDH PV++ 
Sbjct: 234 LTDIMG----SDHCPVLLE 248


>gi|188993425|ref|YP_001905435.1| exodeoxyribonuclease III [Xanthomonas campestris pv. campestris
           str. B100]
 gi|167735185|emb|CAP53397.1| exodeoxyribonuclease III [Xanthomonas campestris pv. campestris]
          Length = 296

 Score =  185 bits (469), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 64/275 (23%), Positives = 112/275 (40%), Gaps = 24/275 (8%)

Query: 2   SVVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           +++ + ++N N +R A       W    + D++C+QETK ++            Y     
Sbjct: 29  ALMRIISFNANGLRSAASKGFFEWFATQDADVLCIQETKAQEHQLAGPEFLPAGYKAWFR 88

Query: 61  G---QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
               +K Y+GVAI +K +P E+ T L   + D + R+IEA F      L + + Y+P G+
Sbjct: 89  DASTKKGYSGVAIYAKREPDEVRTALGWPEFDEEGRYIEARFG----NLSVVSFYIPSGS 144

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
                +   K   ++      S+ L      +  GD+NI+    D  N    + ++    
Sbjct: 145 -SGELRQGYKFQVMEWLRPILSEWLASGRQYVLCGDWNIVRSALDIKNWKSNQKNSGCLP 203

Query: 178 EVRQSFQKLQN-----------MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226
             R     L              G+ D+ R  H     Y++W     + + N G RID+ 
Sbjct: 204 PERDWLNGLCADLLDEADASNGRGWVDSYRVLHPQGEDYTWWSNRGAARANNVGWRIDYQ 263

Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           +++P     + +  I  + R     SDH P IV  
Sbjct: 264 LVTPGLRDKVQACSIYREQR----FSDHAPYIVDY 294


>gi|33519889|ref|NP_878721.1| exonuclease III [Candidatus Blochmannia floridanus]
 gi|33504234|emb|CAD83497.1| exodeoxyribonuclease III [Candidatus Blochmannia floridanus]
          Length = 267

 Score =  185 bits (469), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 85/267 (31%), Positives = 117/267 (43%), Gaps = 7/267 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RA +H L A I +  PD+I LQETK  D  FP + ++   Y++   GQK
Sbjct: 1   MRFVSFNINGLRAHMHQLDALITQLKPDVIGLQETKVHDDIFPVKIIEQYGYYVHFYGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            Y GVA L KY PI +      D L  Q R I A        L I N Y P G    S K
Sbjct: 61  KYYGVAFLFKYPPITVTQGNVYDSLSSQKRTIIAQIVTKIGILTIINCYCPQGENYHSNK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACFTL 177
           +  K  + +    +       +  L+  GD NI P   D           I      F  
Sbjct: 121 FLFKRQFFQNLQHYIENTYNNQSILLIMGDLNISPTDLDVGISEQNKKRWIKSGKCSFLP 180

Query: 178 EVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
           E R     L   G  D  R  +   +  YS++ Y  D + KNKG+RID I+++    +L 
Sbjct: 181 EERSWIHSLMKWGLIDIYRKNNPYNNKRYSWFSYKYDGFHKNKGLRIDLILVTQPLENLY 240

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263
            +  I    RG    SDH P+ V  DI
Sbjct: 241 INGDISYDIRGMPNSSDHAPIWVDFDI 267


>gi|303241137|ref|ZP_07327646.1| exodeoxyribonuclease III Xth [Acetivibrio cellulolyticus CD2]
 gi|302591397|gb|EFL61136.1| exodeoxyribonuclease III Xth [Acetivibrio cellulolyticus CD2]
          Length = 251

 Score =  185 bits (469), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 68/262 (25%), Positives = 114/262 (43%), Gaps = 13/262 (4%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++ + +WNVN IRA +      + ++ + DI C+QETK ++        +    +     
Sbjct: 1   MLKMISWNVNGIRAVMGKGFTDFFQKEDADIFCIQETKVQEGQIEI-PFEGYYKYWNYAE 59

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+GVA+ +K +PI +   +  ++ D + R I   F      + +       G     
Sbjct: 60  KKGYSGVAVFTKIKPITVSYGIGIEEHDKEGRVITLEFDEY-YVVTVYTPNSQRGLTRL- 117

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
                     +       + LE  +P+I  GD N+  +  D  NP   + +A FT E R 
Sbjct: 118 ----HYRMKWEDDFLSYLKSLERYKPVIVCGDLNVAHKEIDLKNPQSNKKNAGFTEEERS 173

Query: 182 SFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            F    N GF D  R  +     +Y++W Y  +S   N G RID+ ++S      L  A 
Sbjct: 174 KFDSYVNNGFIDTFRYFYPDRIGVYTWWSYMFNSRQNNAGWRIDYFIVSERIKDRLKDAL 233

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           + ++  G    SDH PV + LD
Sbjct: 234 VYSEITG----SDHCPVGILLD 251


>gi|329930518|ref|ZP_08284058.1| exodeoxyribonuclease III [Paenibacillus sp. HGF5]
 gi|328934896|gb|EGG31386.1| exodeoxyribonuclease III [Paenibacillus sp. HGF5]
          Length = 250

 Score =  185 bits (469), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 68/261 (26%), Positives = 109/261 (41%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      +  E + DI C+QETK +      +       +     +
Sbjct: 1   MKLVSWNVNGLRACVTKGFMDYFNEADADIFCVQETKLQAGQIELDLGPEYQQYWNYAEK 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G A+ ++  P+ +   L  D                   +   N           +
Sbjct: 61  KGYSGTAVFTRIAPLSVRYGLEEDSEPEGRVITLEFEDFYLVNVYTPNA------KRDLS 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           + D ++ W +RF  +  Q L+  +P+I  GD N+  Q  D  N      ++ FTLE R  
Sbjct: 115 RLDYRLEWEERFRTYLLQ-LDERKPVIVCGDLNVAHQEIDLKNAKSNHGNSGFTLEERGK 173

Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
              L   GF D+ R  +     +YS+W Y A    +N G RID+ + S      L  A I
Sbjct: 174 MTDLLAAGFIDSFRHFYPDRTDVYSWWSYMAKVRERNIGWRIDYFLTSARLAEKLKDAEI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
           D    G    SDH PV ++L+
Sbjct: 234 DCHVLG----SDHCPVSLTLE 250


>gi|229816298|ref|ZP_04446607.1| hypothetical protein COLINT_03350 [Collinsella intestinalis DSM
           13280]
 gi|229808149|gb|EEP43942.1| hypothetical protein COLINT_03350 [Collinsella intestinalis DSM
           13280]
          Length = 280

 Score =  185 bits (469), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 61/277 (22%), Positives = 110/277 (39%), Gaps = 22/277 (7%)

Query: 4   VTVATWNVNSIRARIHN---LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           + +A+WNVN +RA +         + E + DI+ LQETK ++     + L   +      
Sbjct: 9   LKLASWNVNGLRAVLKKDPSFTDIVAELDADILGLQETKLQEGQVELD-LPGYHQVWSYA 67

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT-------------FTINTQTLR 107
            +K Y+G A+  + +P+ +            A   +                 +  +   
Sbjct: 68  ERKGYSGTAVFCREEPLSVRHADAVLAAGRAAGLSDDELELVAVAATEGRVCALEFERFW 127

Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167
             ++Y P+     +                 S   E  +P++  GD+N+     D  NP 
Sbjct: 128 FVDVYTPNAQGELARLSTRMAWDDAYRAFLRSLEDETGKPVVTCGDFNVAHNEIDLKNPK 187

Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHI 226
               +A F+ E R  F +L + G+TD  RA +      YS+W Y  ++   N G RID+ 
Sbjct: 188 SNRGNAGFSDEERAKFGELLDAGYTDTFRAANPNLEGAYSWWSYRFNARKNNAGWRIDYF 247

Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           ++S      + +  I     G    SDH PV + +++
Sbjct: 248 LVSDAIADRVRACGIRNDIFG----SDHCPVTLEIEL 280


>gi|182438103|ref|YP_001825822.1| putative exodeoxyribonuclease [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|178466619|dbj|BAG21139.1| putative exodeoxyribonuclease [Streptomyces griseus subsp. griseus
           NBRC 13350]
          Length = 271

 Score =  185 bits (469), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 57/270 (21%), Positives = 100/270 (37%), Gaps = 10/270 (3%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++TV + NVN +RA        W+   + D++CLQE + E    P        +H     
Sbjct: 1   MLTVTSVNVNGLRAAAKKGFVEWLAGTDADVVCLQEVRAELAQLPEGVGAPEGWHTVHAP 60

Query: 62  Q--KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIE--ATFTINTQTLRIGNLYLPHGN 117
              K   GV++ S+  P        G  +     F        I+   + + +LYLP G 
Sbjct: 61  AAAKGRAGVSLYSRQAPERTQIGFGGFGVPGAEEFDASGRYAEIDLPGVTVASLYLPSGE 120

Query: 118 PITSTKYD---DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
             T  + +      +++       ++       ++  GD+NI  +  D  N       + 
Sbjct: 121 VGTERQDEKERFMAAFLPYLQGLKARAAADGREVVVCGDWNIAHREADLKNWKANRKSSG 180

Query: 175 FTLEVRQSFQKLQNMGFTDAIRA--THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
           F  E R    ++        +      D    YS+W Y   ++  + G RID+ M +P  
Sbjct: 181 FLPEERAWLTRVLEEAAYVDVVRALHPDVEGPYSWWSYRGRAFDNDSGWRIDYQMATPGL 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
                 A ++       + SDH PV V  +
Sbjct: 241 AGRAVKAWVERAATHGERWSDHAPVTVVYE 270


>gi|157804057|ref|YP_001492606.1| exodeoxyribonuclease VII large subunit [Rickettsia canadensis str.
           McKiel]
 gi|157785320|gb|ABV73821.1| exodeoxyribonuclease VII large subunit [Rickettsia canadensis str.
           McKiel]
          Length = 260

 Score =  185 bits (469), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 92/259 (35%), Positives = 142/259 (54%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+NSI+ R++ L  ++ + NPDI+ LQE K E + F F+ L  L Y++   GQK
Sbjct: 1   MKIATWNINSIKTRLNLLRNFLSKENPDILLLQEIKCETEKFLFDELSDLPYNLYVHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVAI+SK+   EI+   P +    QARF+E   ++      I +LY PHG+ + S K
Sbjct: 61  TYNGVAIISKFPANEIIKDFPNNYCSDQARFLEIKLSLPIGLCNIISLYAPHGSFVGSDK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+++ +  + + S +   +E  I  GD+NI P   D Y+P       CFT   ++  
Sbjct: 121 FVTKLAFYESLINYLSTKKSFDEKTIIGGDFNIAPFDIDVYSPKALAETTCFTKVEQKKL 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + + N  F D  R  +     +S+WDY A  + +NKG+RID I+        L +  +D 
Sbjct: 181 RTILNSRFEDLYRLMYPNKQEFSWWDYRAGCFEQNKGMRIDMILGCNNTIDYLENCYMDY 240

Query: 244 KPRGWTKPSDHTPVIVSLD 262
             R   KPSDH PVI +  
Sbjct: 241 NLRTQEKPSDHIPVIANFK 259


>gi|229031365|ref|ZP_04187367.1| Exodeoxyribonuclease [Bacillus cereus AH1271]
 gi|228729930|gb|EEL80908.1| Exodeoxyribonuclease [Bacillus cereus AH1271]
          Length = 252

 Score =  185 bits (469), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 68/262 (25%), Positives = 120/262 (45%), Gaps = 14/262 (5%)

Query: 4   VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + +WNVN +RA         +++E+N DI CLQE K +D        +    +     
Sbjct: 1   MKLISWNVNGLRAVIAKGGFLEYLEESNADIFCLQEIKLQDGQIDLNP-EGYYTYWNYAV 59

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G AI SK +P+ +   L  ++ D + R I   F                 +    
Sbjct: 60  KKGYSGTAIFSKQEPLSVTYGLGIEEHDQEGRVITVEFEGFYMI-----TLYTPNSKRGL 114

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            + D ++ W   F  +  + L+ ++P+IF GD N+  +  D  NP     +  F+ E R+
Sbjct: 115 ERLDYRMKWEDDFRAYIKR-LDEKKPVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEERE 173

Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            F ++   GF D  R  +      YS+W Y   + +KN G R+D+ ++S      +  A+
Sbjct: 174 KFTRILEEGFIDTYRYLYPDQEGAYSWWSYRMGARAKNIGWRLDYFVVSERMKDKITEAK 233

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I+++  G    SDH PV + ++
Sbjct: 234 INSEVMG----SDHCPVELHIN 251


>gi|297193885|ref|ZP_06911283.1| exodeoxyribonuclease [Streptomyces pristinaespiralis ATCC 25486]
 gi|197720247|gb|EDY64155.1| exodeoxyribonuclease [Streptomyces pristinaespiralis ATCC 25486]
          Length = 277

 Score =  185 bits (469), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 52/265 (19%), Positives = 95/265 (35%), Gaps = 6/265 (2%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++TV + NVN +RA        W+     D++CLQE + E    P E             
Sbjct: 13  MLTVTSVNVNGLRAAAKKGFVEWLATTAADVVCLQEVRAEADQLPPEVRNPDGRFTVYAP 72

Query: 62  Q--KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
              K   GVA+ ++ +P  +       + D   R++EA     T    +       G   
Sbjct: 73  AAAKGRAGVALFTRREPDAVRIGFGSSEFDGSGRYVEADLPGVTVA-SLYLPSGEVGTER 131

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K      ++       ++       ++  GD+NI     D  N      ++ F  E 
Sbjct: 132 QDEKMRFMSEFLPYLKELRARSAADGREVVVCGDWNIAHHEADLKNWKSNRKNSGFLPEE 191

Query: 180 RQSFQKLQNMGFTDAIRA--THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
           R+   ++ +      +      D    Y++W Y   ++  + G RID+ + +P       
Sbjct: 192 REWLGRVFSEAEYVDVVRDLHPDQEGPYTWWSYRGRAFDNDSGWRIDYQVATPGLARRAV 251

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLD 262
            A ++       + SDH PV    +
Sbjct: 252 KAWVERAATHGERWSDHAPVTAVYE 276


>gi|257877428|ref|ZP_05657081.1| exodeoxyribonuclease [Enterococcus casseliflavus EC20]
 gi|325568814|ref|ZP_08145107.1| exodeoxyribonuclease III [Enterococcus casseliflavus ATCC 12755]
 gi|257811594|gb|EEV40414.1| exodeoxyribonuclease [Enterococcus casseliflavus EC20]
 gi|325157852|gb|EGC70008.1| exodeoxyribonuclease III [Enterococcus casseliflavus ATCC 12755]
          Length = 250

 Score =  185 bits (469), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 70/261 (26%), Positives = 116/261 (44%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA    N +   +  + D  CLQETK ++     + L   + +     +
Sbjct: 1   MKFISWNVNGLRAIVKKNFSEVFEALDADFFCLQETKLQEGQIELD-LPGYHQYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K   + +   L  ++ D + R I   +                 +     
Sbjct: 60  KGYSGTAIFAKEPALSVRYGLGIEEHDTEGRVITLEYPEF-----FLITCYTPNSQNELR 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           + D +++W   FL +    L+ ++P+I  GD N+  +  D  N    +  A FT E R+ 
Sbjct: 115 RLDYRMTWEDAFLAY-LTELKQQKPVILCGDLNVAHKNIDIKNWKTNQKSAGFTPEEREK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F  L   GFTD  R  +     +YS+W Y  ++   N G RID+ ++S +    L  A+I
Sbjct: 174 FSTLLAAGFTDTFRYFYPDAEGIYSWWSYRFNARKNNAGWRIDYFVVSDDLNERLLDAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            T   G    SDH PV + L+
Sbjct: 234 HTDIIG----SDHCPVELDLN 250


>gi|331002672|ref|ZP_08326187.1| exodeoxyribonuclease [Lachnospiraceae oral taxon 107 str. F0167]
 gi|330407085|gb|EGG86589.1| exodeoxyribonuclease [Lachnospiraceae oral taxon 107 str. F0167]
          Length = 262

 Score =  185 bits (469), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 70/261 (26%), Positives = 124/261 (47%), Gaps = 13/261 (4%)

Query: 5   TVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
            + +WNVN +RA +      + ++ + DI C+QE+K  +     +     +Y      +K
Sbjct: 13  KMISWNVNGLRAAVTKGFLDFFRDIDADIFCIQESKLSEGQIELDLPGYYDY-WNYAAKK 71

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            Y+GVA+ +K +PI +   +  ++ D + R I A +                 +    T+
Sbjct: 72  GYSGVAVFTKDKPIGVTYGIGIEEHDNEGRVITAEYDDFYLI-----TCYTPNSQRGLTR 126

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
            D +++W   FL +  + LE ++P+IF GD N+  +  D  NP     +A FT E R   
Sbjct: 127 LDYRMAWEDAFLDYVLK-LEEKKPVIFCGDLNVAHKEIDLKNPKTNRKNAGFTDEERGKM 185

Query: 184 QKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
             + + GF D+ R  +      YS+W Y   + +KN G RID+ ++S +    +  A+I 
Sbjct: 186 DIVLSSGFADSFRVLYPDKEGAYSWWSYMGGARAKNVGWRIDYFIVSDKLKDRIKEAKIH 245

Query: 243 TKPRGWTKPSDHTPVIVSLDI 263
           +   G    SDH PV + ++I
Sbjct: 246 SDILG----SDHCPVELDIEI 262


>gi|266623165|ref|ZP_06116100.1| exodeoxyribonuclease III [Clostridium hathewayi DSM 13479]
 gi|288865076|gb|EFC97374.1| exodeoxyribonuclease III [Clostridium hathewayi DSM 13479]
          Length = 251

 Score =  185 bits (469), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 76/260 (29%), Positives = 121/260 (46%), Gaps = 13/260 (5%)

Query: 5   TVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
            + +WNVN +RA +      + KE + DI C+QE+K  +     E L   + +     +K
Sbjct: 3   KLISWNVNGLRACVGKGFLDYFKEVDADIFCIQESKLSEGQIELE-LSGYHQYWNYAEKK 61

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            Y+G A+ +K +P+ +   +  ++ D + R I A F+                +     +
Sbjct: 62  GYSGTAMFTKEEPLSVAYGIGIEEHDHEGRVITAEFSD-----YYVVTCYTPNSKDGLAR 116

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
              ++ W   FLR+    LE ++P+IF GD N+  +  D  NP     +A FT E R  F
Sbjct: 117 LPYRMVWEDAFLRYLKG-LEEKKPVIFCGDLNVAHKEIDLKNPKTNRKNAGFTDEERGKF 175

Query: 184 QKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
             L + GF D  R  +     +YS+W Y   + SKN G RID+  +S      L SA I 
Sbjct: 176 TDLLDAGFIDTFRWFYPDREEIYSWWSYRFSARSKNAGWRIDYFCVSEALKDRLVSADIH 235

Query: 243 TKPRGWTKPSDHTPVIVSLD 262
           T+  G    SDH PV + ++
Sbjct: 236 TEVLG----SDHCPVELVIE 251


>gi|251794788|ref|YP_003009519.1| exodeoxyribonuclease III Xth [Paenibacillus sp. JDR-2]
 gi|247542414|gb|ACS99432.1| exodeoxyribonuclease III Xth [Paenibacillus sp. JDR-2]
          Length = 258

 Score =  185 bits (469), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 70/261 (26%), Positives = 118/261 (45%), Gaps = 12/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +      +  E + D  CLQETK ++     E  ++ +       +
Sbjct: 1   MKFVSWNVNGLRASVNKGFLDYFNEMDADFFCLQETKLQEGQIKLELGEAYHLFWHYAEK 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K++P+ I   L  +D D + R I   +        +  +Y P+     S 
Sbjct: 61  KGYSGTAIFTKHKPLSISYGLGEEDEDTEGRVITLEYE----NFYLVTVYTPNARRDLSR 116

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
              D     +   R    +L+  +P+I  GD N+  Q  D  N      ++ FT E R+ 
Sbjct: 117 L--DFRLAWEEMFRGYLIKLDEHKPVIVCGDLNVAHQDIDLKNAKSNRGNSGFTDEEREK 174

Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             +L + GF D+ R  +      Y++W +      +N G RID+ + S      +  A I
Sbjct: 175 MTRLLDAGFIDSFRYLYPDRTDAYTWWSFMPKIRERNVGWRIDYFLASARLAPAIVEAGI 234

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
           D++  G    SDH PV+++LD
Sbjct: 235 DSQILG----SDHCPVVLTLD 251


>gi|221218058|ref|ZP_03589524.1| exodeoxyribonuclease III [Borrelia burgdorferi 72a]
 gi|224533538|ref|ZP_03674127.1| exodeoxyribonuclease III [Borrelia burgdorferi CA-11.2a]
 gi|225549668|ref|ZP_03770634.1| exodeoxyribonuclease III [Borrelia burgdorferi 118a]
 gi|221192006|gb|EEE18227.1| exodeoxyribonuclease III [Borrelia burgdorferi 72a]
 gi|224513211|gb|EEF83573.1| exodeoxyribonuclease III [Borrelia burgdorferi CA-11.2a]
 gi|225369945|gb|EEG99392.1| exodeoxyribonuclease III [Borrelia burgdorferi 118a]
 gi|312149695|gb|ADQ29766.1| exodeoxyribonuclease III [Borrelia burgdorferi N40]
          Length = 255

 Score =  185 bits (469), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 58/260 (22%), Positives = 104/260 (40%), Gaps = 12/260 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFE-TLQSLNYHIETCG 61
           + + +WNVN IRA +      ++KE  PDI+C+QETK   +  P +   ++   +     
Sbjct: 1   MKLISWNVNGIRAVLKKGFLEFVKEYTPDILCIQETKALREQLPKDLIFENYYSYFSNSK 60

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
            K Y+GV I SK +PI +         +     +            I        + +  
Sbjct: 61  IKGYSGVCIYSKVEPISVRLLGEEIFDNEGRGLVACYDDF------ILVNGYFPNSQVLR 114

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            +   K+ ++      A   +   + ++  GD+NI     D  +P    +   + +E   
Sbjct: 115 RRLGYKLDFLSYVENLADSLVCDGKNVVICGDFNIAHTEIDLISPDSNRDSPGYYIEETT 174

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
                 N G+ D  R  +     Y++W Y   +  +N G RID+ +++      +  + I
Sbjct: 175 WLDDFLNKGYVDTFRIFNKDPGYYTWWSYRTRARERNMGWRIDYFIVNEFFKRNVEKSLI 234

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
             K  G    SDH PV + L
Sbjct: 235 LDKVMG----SDHCPVFLEL 250


>gi|255523264|ref|ZP_05390235.1| exodeoxyribonuclease III Xth [Clostridium carboxidivorans P7]
 gi|296186225|ref|ZP_06854630.1| exodeoxyribonuclease III [Clostridium carboxidivorans P7]
 gi|255513132|gb|EET89401.1| exodeoxyribonuclease III Xth [Clostridium carboxidivorans P7]
 gi|296049493|gb|EFG88922.1| exodeoxyribonuclease III [Clostridium carboxidivorans P7]
          Length = 252

 Score =  185 bits (469), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 70/260 (26%), Positives = 112/260 (43%), Gaps = 13/260 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      + KE N DI C+QE+K ++     E L+  + +     +
Sbjct: 1   MKLISWNVNGLRACVTKGFLEFFKEVNADIFCIQESKLQEGQIELE-LEGYHQYWNYAER 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +P+     +  ++ D + R I   F                   +   
Sbjct: 60  KGYSGTAIFTKKKPLSFTYGIGIEEHDKEGRVITLEFDDFYMVTVYTPNSKDQLARLEYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +   R   + LE  +P+I  GD N+  +  D  NP     +A FT E R+ 
Sbjct: 120 M------KWENDFRDYLKSLEKNKPVIMCGDLNVAHKEIDLKNPKTNRKNAGFTDEEREK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +  + GF D  R  +      YS+W Y  ++   N G RID+  +S      L SA I
Sbjct: 174 FTEFLSAGFIDTYRYFNPDKEGAYSWWSYRFNARKNNAGWRIDYFCVSDCLKERLVSADI 233

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
            T+  G    SDH PV + +
Sbjct: 234 HTEVMG----SDHCPVELVI 249


>gi|39933358|ref|NP_945634.1| exodeoxyribonuclease III [Rhodopseudomonas palustris CGA009]
 gi|39652983|emb|CAE25725.1| possible exodeoxyribonuclease III [Rhodopseudomonas palustris
           CGA009]
          Length = 270

 Score =  185 bits (469), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 79/268 (29%), Positives = 128/268 (47%), Gaps = 8/268 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62
           +T+ TWN+NS+R RI  +A ++K   PDI+CLQETK  D  FP +  + L Y HI   GQ
Sbjct: 3   LTLTTWNINSVRLRIDLVAKFLKAQRPDILCLQETKCPDDAFPLKRFKRLGYEHIALNGQ 62

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT-- 120
           K Y+GVA++SK   +        D +D +   +      N   L + N Y+P G  I   
Sbjct: 63  KGYHGVAVISKLPFVTTDIRTFCDIIDSRHISVSVKTDENAPPLVLHNFYVPAGGDIPDP 122

Query: 121 --STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL- 177
             + K+  K+S++             ++  I  GD N+ P  HD ++          T  
Sbjct: 123 AVNPKFKHKLSFLDEMKACEPLHPSGDQRHILVGDLNVAPHEHDVWSHKQLLKVVSHTPV 182

Query: 178 EVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSL 235
           E  +    L+   + D  R        +Y++W Y A  W+  ++G R+DHI +S      
Sbjct: 183 ECEKLLAVLRAGNWVDVARERIPLDQKVYTWWSYRAADWTVGDRGRRLDHIWVSEALKDR 242

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +   ++    R W +PSDH PV +++++
Sbjct: 243 VVDFKVLRDARSWERPSDHVPVTMTMEL 270


>gi|206558889|ref|YP_002229649.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           cenocepacia J2315]
 gi|198034926|emb|CAR50798.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           cenocepacia J2315]
          Length = 257

 Score =  185 bits (469), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 63/264 (23%), Positives = 114/264 (43%), Gaps = 14/264 (5%)

Query: 3   VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59
           ++ V T N+N IR A       W+ E N D +C+QE K    + P E ++   +  +   
Sbjct: 1   MMRVITANLNGIRSAAKKGFFDWLGEQNADCVCVQEIKVSADDLPAEFVEPHGFKSYFHH 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G  + S+ +P +++      + D + R++EA +      L + ++Y+P G+  
Sbjct: 61  AEKKGYSGAGVYSRREPDDVIIGFGSSEFDPEGRYVEARYG----KLSVVSVYVPSGSSG 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +                  L+ +  +I  GD NI+ +  D  N    + ++    E 
Sbjct: 117 EERQQA--KYRFMAEFMPHLAALKKKREVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEE 174

Query: 180 RQSFQK-LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R+   K   ++G+ D  R        Y++W     +++KN G RID+ + +P       S
Sbjct: 175 REWLTKLFDDVGYVDVFRTLDPRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGVAGTAKS 234

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
           A I        K SDH P+ V  D
Sbjct: 235 ASIFKDI----KFSDHAPLTVDYD 254


>gi|323136205|ref|ZP_08071287.1| exodeoxyribonuclease III Xth [Methylocystis sp. ATCC 49242]
 gi|322398279|gb|EFY00799.1| exodeoxyribonuclease III Xth [Methylocystis sp. ATCC 49242]
          Length = 266

 Score =  184 bits (468), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 74/264 (28%), Positives = 120/264 (45%), Gaps = 6/264 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62
           + + TWN+NS+R R+  +A ++K   PD++CLQETK  D  FP +   +L Y H+   GQ
Sbjct: 1   MKITTWNINSVRLRMPLVAHFLKTRAPDVLCLQETKCRDAEFPMKDFHALGYRHVAINGQ 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR--IGNLYLPHGNPIT 120
           K Y+GVA++SK     +      +  D +   +E         L            +   
Sbjct: 61  KGYHGVAVVSKKPLRFVEKRDFCEKGDARHIAVEIEAKSGPIMLHNFYVPAGGDEPDVEI 120

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EV 179
           + K+  K+ ++     +       +  +   GD NI P  HD ++          T  EV
Sbjct: 121 NPKFAHKLDFLDEMKSWIETEGVTKGRVALVGDLNIAPLEHDVWSHKALLKVVSHTPVEV 180

Query: 180 RQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLLH 237
            +     +   + DA+R        LY++W Y A  W + N+G R+DHI++S      L 
Sbjct: 181 EKLTDVFRAGRWIDAMRHFVPADEKLYTWWSYRAADWAASNRGRRLDHILVSEALGGALS 240

Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261
              +  + RGW +PSDH PV + L
Sbjct: 241 RLDVLQEARGWERPSDHVPVTIEL 264


>gi|241888975|ref|ZP_04776279.1| exodeoxyribonuclease III [Gemella haemolysans ATCC 10379]
 gi|241864224|gb|EER68602.1| exodeoxyribonuclease III [Gemella haemolysans ATCC 10379]
          Length = 254

 Score =  184 bits (468), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 67/261 (25%), Positives = 112/261 (42%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   ++NVN +RA +  N     K+ + D  CLQETK +      +       +     +
Sbjct: 1   MKCISFNVNGLRAIVGKNFEEDFKQLDADFFCLQETKMQAGQLDLQ-FDGYYSYFNYAER 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K++P+ +   +  ++ D + R I   +    +   I       G+ +   
Sbjct: 60  KGYSGTAIYTKHEPLNVTYGIGIEEHDTEGRVITLEY---DKFFFITVYTPNSGSELKRL 116

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +Y       +   +     L   + ++  GD N+     D  NP     +A FT E R+ 
Sbjct: 117 EYR---MSWEEDFKNYLLALNKTKGVVVCGDLNVAHTEIDLKNPKSNMKNAGFTPEEREK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F KL + GF D  R  +      YS+W Y  ++   N G RID+ ++S +    L SA I
Sbjct: 174 FTKLLDAGFIDTFRYYNPDLTGAYSWWSYRFNARKNNAGWRIDYFLVSRDLEEYLESAAI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
             +  G    SDH PV + L 
Sbjct: 234 HNEIFG----SDHCPVELVLK 250


>gi|210622632|ref|ZP_03293292.1| hypothetical protein CLOHIR_01240 [Clostridium hiranonis DSM 13275]
 gi|210154133|gb|EEA85139.1| hypothetical protein CLOHIR_01240 [Clostridium hiranonis DSM 13275]
          Length = 250

 Score =  184 bits (468), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 68/261 (26%), Positives = 112/261 (42%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +      +  E + DI CLQETK ++        +    +     +
Sbjct: 1   MKFISWNVNGLRACVTKGFMDFFNEVDADIFCLQETKLQEGQIDLNP-EGYESYWNYADK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +P+ +   +  D+ D + R I   F           +Y P+       
Sbjct: 60  KGYSGTAIFTKKKPLSVAYGIGIDEHDHEGRVITLEFE----DFYFVTVYTPNSQTELKR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
              +     +   R   + L+ ++P++  GD N+  +  D  NP     +A FT E R  
Sbjct: 116 L--EYRMRWEDDFRAYLKNLDSKKPVVMCGDLNVAHKEIDLKNPKTNRKNAGFTDEERNK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +    GF D  R  +     +YS+W Y  ++   N G RID+   S      L SA+I
Sbjct: 174 FTEFLESGFIDTFRYFYPDAEGMYSWWSYRFNARKNNAGWRIDYFCTSESMKDRLVSAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
             +  G    SDH PV + ++
Sbjct: 234 HNEVLG----SDHCPVELVIE 250


>gi|260589662|ref|ZP_05855575.1| exodeoxyribonuclease III [Blautia hansenii DSM 20583]
 gi|331083093|ref|ZP_08332210.1| exodeoxyribonuclease [Lachnospiraceae bacterium 6_1_63FAA]
 gi|260539902|gb|EEX20471.1| exodeoxyribonuclease III [Blautia hansenii DSM 20583]
 gi|330405095|gb|EGG84632.1| exodeoxyribonuclease [Lachnospiraceae bacterium 6_1_63FAA]
          Length = 251

 Score =  184 bits (468), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 70/262 (26%), Positives = 115/262 (43%), Gaps = 13/262 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +      + ++ + D  C+QETK ++    FE  +    +     +
Sbjct: 1   MKFISWNVNGLRACVKKGFTEFFEQTDADFFCIQETKLQEGQIDFEP-EGYFCYWNYAVK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +P+ +   +  ++ D + R I   +                   ++  
Sbjct: 60  KGYSGTAIFAKKEPLSVQYGIGIEEHDQEGRVITLEYENFYMVTVYTPNSQSELARLSYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +   R   Q+L+ ++P+I  GD N+  Q  D  NP    ++A FT E R+ 
Sbjct: 120 MQ------WEDDFRAYLQQLDEKKPVIMCGDLNVAHQEIDLKNPKTNRHNAGFTDEEREK 173

Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F    + GFTD  R  +     +YS+W Y   +  KN G RID+   S      L SA I
Sbjct: 174 FTTFLDAGFTDTFRYFYPDKTEIYSWWSYRFKAREKNAGWRIDYFCTSKRLDEKLLSASI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
            T   G    SDH PV V +++
Sbjct: 234 HTDIFG----SDHCPVEVQIEL 251


>gi|317497391|ref|ZP_07955713.1| exodeoxyribonuclease III [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316895311|gb|EFV17471.1| exodeoxyribonuclease III [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 250

 Score =  184 bits (468), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 66/261 (25%), Positives = 111/261 (42%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN IRA +      +  E + DI C+QE+K ++       L   + +     +
Sbjct: 1   MKFISWNVNGIRACVKKGFLDFFNETDADIFCIQESKMQEGQLDLN-LPEYHQYWNYAVK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G  I +K +PI +   L  ++ D + R I   F                   ++  
Sbjct: 60  KGYSGTGIFTKEEPISVFYGLGIEEHDQEGRVITLEFKDYYFITVYTPNSQSELARLSYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +       ++LE ++P+IF GD N+  +  D  NP     +A FT E R+ 
Sbjct: 120 M------KWEEDFLAYLKKLEEKKPVIFCGDLNVAVEEIDLKNPKTNRKNAGFTDEEREK 173

Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
            + + N GF D  R  +     +YS+W Y  ++   N G RID+ ++S      +  A+I
Sbjct: 174 MRTILNNGFIDTFRYLYPDQTGIYSWWSYRFNARKNNAGWRIDYFIVSECLKDRISDAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            T   G    SDH P+ +   
Sbjct: 234 LTDVMG----SDHCPIELDFK 250


>gi|47568231|ref|ZP_00238934.1| exodeoxyribonuclease III [Bacillus cereus G9241]
 gi|228986876|ref|ZP_04147003.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
 gi|47555059|gb|EAL13407.1| exodeoxyribonuclease III [Bacillus cereus G9241]
 gi|228772825|gb|EEM21264.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
          Length = 252

 Score =  184 bits (468), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 73/262 (27%), Positives = 125/262 (47%), Gaps = 14/262 (5%)

Query: 4   VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + +WNVN +RA         +++E+N DI CLQE K +D       L+    +     
Sbjct: 1   MKLISWNVNGLRAVIAKGGFLEYLEESNADIFCLQEIKLQDGQIDLN-LEEYYTYWNYAV 59

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G AI SK +P+ +   L  ++ D + R I   F        I  LY P+ +    
Sbjct: 60  KKGYSGTAIFSKKEPLSVTYGLGIEEHDQEGRVITLEFE----DFYIITLYTPN-SKRGL 114

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            + D ++ W   F  +  + L+ ++P+IF GD N+  +  D  NP     +  F+ E R+
Sbjct: 115 ERLDYRMKWEDDFRVYIKR-LDEKKPVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEERE 173

Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            F  +   GF D  R  +      YS+W Y   + +KN G R+D+ ++S      +  A+
Sbjct: 174 KFTCILEEGFIDTYRYLYPNQEGAYSWWSYRMGARAKNIGWRLDYFVVSERMKDQITEAK 233

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I+++  G    SDH PV + ++
Sbjct: 234 INSEVMG----SDHCPVELHIN 251


>gi|296330017|ref|ZP_06872501.1| apurinic/apyrimidinic endonuclease [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305676741|ref|YP_003868413.1| apurinic/apyrimidinic endonuclease [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|296153056|gb|EFG93921.1| apurinic/apyrimidinic endonuclease [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305414985|gb|ADM40104.1| apurinic/apyrimidinic endonuclease [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 252

 Score =  184 bits (468), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 74/265 (27%), Positives = 120/265 (45%), Gaps = 18/265 (6%)

Query: 4   VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + +WNVN +RA +      +++KE + DIICLQETK +D       LQ   YH+    
Sbjct: 1   MKLISWNVNGLRAVMRKMDFLSYLKEEDADIICLQETKIQDGQVD---LQPDGYHVYWNY 57

Query: 62  --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G A+ SK +P+ ++  +  ++ D + R I   F                   I
Sbjct: 58  AVKKGYSGTAVFSKQEPLRVMYGIGIEEHDQEGRVITLEFENLFVMTVYTPNSKRGLERI 117

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                       +  L      L+ ++P+I  GD N+  Q  D  NP    N+A F+ + 
Sbjct: 118 DYRMQ------WEEALLSYILELDKKKPVILCGDLNVAHQEIDLKNPKANRNNAGFSDQE 171

Query: 180 RQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R +F +L   GF D+ R  +      YS+W Y A +  +N G R+D+ ++S      +  
Sbjct: 172 RGAFTRLLEAGFVDSFRHVYPDLEGAYSWWSYRAGARDRNIGWRLDYFVVSERLEEQIED 231

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263
           A I     G    SDH PV + ++I
Sbjct: 232 ASISADVMG----SDHCPVELMINI 252


>gi|317503938|ref|ZP_07961946.1| exodeoxyribonuclease III [Prevotella salivae DSM 15606]
 gi|315664964|gb|EFV04623.1| exodeoxyribonuclease III [Prevotella salivae DSM 15606]
          Length = 250

 Score =  184 bits (468), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 69/261 (26%), Positives = 109/261 (41%), Gaps = 12/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +  + +   +  N D  CLQETK +      +       +     +
Sbjct: 1   MKFISWNVNGLRACVGKDFSQSFESLNADFFCLQETKMQAGQLELQ-FPGYTSYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI ++ +P+ +   +  D+ D + R I   +                   +   
Sbjct: 60  KGYSGTAIYTRKEPLAVSYGIGIDEHDHEGRVITLEYDKFFLVTVYTPNAQEELRRLDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +   +    +L+ ++P+I  GD N+  Q  D  NP      A FT E R  
Sbjct: 120 M------TWEDAFQAYLHQLDAKKPVIVCGDMNVAHQEIDLKNPKTNRRSAGFTDEERSK 173

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
             +L + GFTD  R  H     YS+W Y   +  KN G RID+ ++S      L  A I 
Sbjct: 174 MTQLLSNGFTDTFRTLHPEQITYSYWSYRFRAREKNAGWRIDYFLISDRLRPQLKGASIH 233

Query: 243 TKPRGWTKPSDHTPVIVSLDI 263
           T+  G    SDH PV + +DI
Sbjct: 234 TEIYG----SDHCPVELDIDI 250


>gi|15604519|ref|NP_221037.1| exodeoxyribonuclease III (xthA2) [Rickettsia prowazekii str. Madrid
           E]
 gi|3861213|emb|CAA15113.1| EXODEOXYRIBONUCLEASE III (xthA2) [Rickettsia prowazekii]
 gi|292572307|gb|ADE30222.1| Exodeoxyribonuclease III [Rickettsia prowazekii Rp22]
          Length = 269

 Score =  184 bits (468), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 95/258 (36%), Positives = 140/258 (54%), Gaps = 1/258 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+NSI+ R++ L  ++ + NPDI+ LQE K E + FPF  L  L YH    GQK
Sbjct: 1   MKIATWNINSIKTRLNLLRNFLSKENPDILLLQEIKCETEKFPFNELSDLPYHFYVHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           SYNGVAI+SK+   +I+     +  + QARF+E   +       I +LY P+G+ + S K
Sbjct: 61  SYNGVAIISKFPADQIIKDFQNNYCNDQARFLEIKLSSPIGYSNIISLYAPNGSFVGSNK 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           + +K+ +   F+ + S +    E  I  GD+NI P   D Y+ ++ E   C  +E ++  
Sbjct: 121 FVEKLKFYDNFINYLSTKKSCYEKTIIGGDFNIAPFDIDVYSKVLTETTCCTEVEQKKLR 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             L N GF D  R  H     +S+WDY A  + +NKG+RID I+        L    +D 
Sbjct: 181 TIL-NSGFEDLYRLMHPDKQEFSWWDYRAGCFEQNKGMRIDMILGCNNTIDYLERCYMDY 239

Query: 244 KPRGWTKPSDHTPVIVSL 261
             R   KPSDH P+I S 
Sbjct: 240 NLRTQKKPSDHIPIIASF 257


>gi|218249629|ref|YP_002375040.1| exodeoxyribonuclease III [Borrelia burgdorferi ZS7]
 gi|218164817|gb|ACK74878.1| exodeoxyribonuclease III [Borrelia burgdorferi ZS7]
          Length = 255

 Score =  184 bits (468), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 59/260 (22%), Positives = 104/260 (40%), Gaps = 12/260 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCG 61
           + + +WNVN IRA +      ++KE  PDI+C+QETK   +  P + +    Y +     
Sbjct: 1   MKLISWNVNGIRAVLKKGFLEFVKEYTPDILCIQETKALREQLPKDLILENYYSYFSNSK 60

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
            K Y+GV I SK +PI +         +     +            I        + +  
Sbjct: 61  IKGYSGVCIYSKVEPISVRLLGEEIFDNEGRGLVACYDDF------ILVNGYFPNSQVLR 114

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            +   K+ ++      A   +   + ++  GD+NI     D  +P    +   + +E   
Sbjct: 115 RRLGYKLDFLFYVENLADSLVCDGKNVVICGDFNIAHTEIDLISPDSNRDSPGYYIEETT 174

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
                 N G+ D  R  +     Y++W Y   +  +N G RID+ +++      +  + I
Sbjct: 175 WLDDFLNKGYVDTFRIFNKDPGYYTWWSYRTRARERNMGWRIDYFIVNEFFKRNVEKSLI 234

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
             K  G    SDH PV + L
Sbjct: 235 LDKVMG----SDHCPVFLEL 250


>gi|295704797|ref|YP_003597872.1| exodeoxyribonuclease III [Bacillus megaterium DSM 319]
 gi|294802456|gb|ADF39522.1| exodeoxyribonuclease III [Bacillus megaterium DSM 319]
          Length = 253

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 60/263 (22%), Positives = 107/263 (40%), Gaps = 14/263 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN IRA +      + +E   D+ C+QETK ++     + L+    +     +
Sbjct: 1   MKLISWNVNGIRACVRKGFLDYFQEVTADVFCIQETKLQEGQIDLQ-LEGYYQYWNYAVK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G A+ +K +P+ +   +  +  D                +   N            
Sbjct: 60  KGYSGTAVFTKQKPLSVSFGVDKELEDEGRIITLEFEQCYVVNVYTPNSKRDLARLEERL 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +++         L    ++L   + +I  GD N+     D  NP     ++ FT+E R  
Sbjct: 120 QWE-------DDLLVYLKKLNSRKAVILCGDLNVAHAEIDLRNPKPNRGNSGFTIEERGK 172

Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
              L   GF D  R  +      Y++W Y      +N G RID+ ++S     ++  A I
Sbjct: 173 MTTLLASGFLDTFRYLYPNQEGAYTWWSYMNKVRERNIGWRIDYFIVSERIKDVIQEAAI 232

Query: 242 DTKPRGWTKPSDHTPVIVSLDIP 264
                G    SDH PV++ L++P
Sbjct: 233 HPHVMG----SDHCPVMLELNVP 251


>gi|282855380|ref|ZP_06264703.1| exodeoxyribonuclease III [Pyramidobacter piscolens W5455]
 gi|282586760|gb|EFB92005.1| exodeoxyribonuclease III [Pyramidobacter piscolens W5455]
          Length = 307

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 92/261 (35%), Positives = 136/261 (52%), Gaps = 6/261 (2%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
            V+ VAT+NVNS+R+R+  L  W+     DI+ LQETK +D+ FP   ++ L Y     G
Sbjct: 50  RVMRVATFNVNSLRSRLPILERWLPGAGVDILALQETKVQDQEFPLADMEQLGYRAAFRG 109

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +KSYNGVAILSK +P E++         V   +           + I + Y+P G  IT 
Sbjct: 110 EKSYNGVAILSKREPDEVIHGFSD---GVSPLWDTRLIAARFGDIWILDTYVPQGKEITH 166

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
             Y+ K  +++R     +     +E L++ GD N+ P   D  NP   ++  CF  E+R 
Sbjct: 167 PDYEAKKEFLRRTAALIA--ARKDEKLLWTGDLNVAPTELDVTNPANKKDHVCFVKELRD 224

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYY-ADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            F +L      D +R  H    LYSF+DY   ++  +  G RIDH++ +P       +  
Sbjct: 225 LFAELCAPLVVDLLRVHHPGEELYSFFDYRIKNALERRIGWRIDHMLATPALAGQSRACW 284

Query: 241 IDTKPRGWTKPSDHTPVIVSL 261
           IDT+PRGW KPSDHTP++   
Sbjct: 285 IDTEPRGWEKPSDHTPMLADF 305


>gi|224532103|ref|ZP_03672735.1| exodeoxyribonuclease III [Borrelia valaisiana VS116]
 gi|224511568|gb|EEF81974.1| exodeoxyribonuclease III [Borrelia valaisiana VS116]
          Length = 255

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 59/260 (22%), Positives = 103/260 (39%), Gaps = 12/260 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCG 61
           + + +WNVN IRA +      ++KE  PDI+C+QETK   +  P + +    Y +     
Sbjct: 1   MKLISWNVNGIRAVLKKGFLEFVKEYAPDILCVQETKALREQLPKDLILENYYSYFSKSK 60

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
            K Y+GV I SK +PI +         +     I            +        +    
Sbjct: 61  IKGYSGVCIYSKVEPIAVNFLGKEIFDNEGRGIIAYYDDF------VLINGYFPNSQALR 114

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            +   K+ ++          +   + ++  GD+NI     D  +P    +   + +E   
Sbjct: 115 RRLVYKLDFLSYIENLIDSLVNGGKNVVICGDFNIAHTEIDLISPDSNRDSPGYYIEETT 174

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
                 N G+ D  R  +     Y++W+Y   +  KN G RID+ +++      +  + I
Sbjct: 175 WIDNFLNKGYVDTFRIFNKEPGYYTWWNYRTGAREKNMGWRIDYFVVNEFFKRNVKKSLI 234

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
             K  G    SDH PV + L
Sbjct: 235 LDKVMG----SDHCPVFLEL 250


>gi|225552135|ref|ZP_03773075.1| exodeoxyribonuclease III [Borrelia sp. SV1]
 gi|225371133|gb|EEH00563.1| exodeoxyribonuclease III [Borrelia sp. SV1]
          Length = 255

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 59/260 (22%), Positives = 103/260 (39%), Gaps = 12/260 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCG 61
           + + +WNVN IRA +      ++KE  PDI+C+QETK   +  P + +    Y +     
Sbjct: 1   MKLISWNVNGIRAVLKKGFLEFVKEYTPDILCIQETKALREQLPKDLILENYYSYFSKSK 60

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
            K Y+GV I SK +PI +         +     +            I        + +  
Sbjct: 61  IKGYSGVCIYSKVEPISVRLLGEEIFDNEGRGLVACYDDF------ILVNGYFPNSQVLR 114

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            +   K+ ++      A   +   + ++  GD+NI     D  +P        + +E   
Sbjct: 115 RRLGYKLDFLSYVENLADSLVCDGKNVVICGDFNIAHTEIDLISPDSNRESPGYYIEETT 174

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
                 N G+ D  R  +     Y++W Y   +  +N G RID+ +++      +  + I
Sbjct: 175 WLDDFLNKGYVDTFRIFNKDPGYYTWWSYRTRARERNMGWRIDYFIVNEFFKRNVEKSLI 234

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
             K  G    SDH PV + L
Sbjct: 235 LDKVMG----SDHCPVFLEL 250


>gi|189460159|ref|ZP_03008944.1| hypothetical protein BACCOP_00795 [Bacteroides coprocola DSM 17136]
 gi|189433149|gb|EDV02134.1| hypothetical protein BACCOP_00795 [Bacteroides coprocola DSM 17136]
          Length = 253

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 70/263 (26%), Positives = 117/263 (44%), Gaps = 13/263 (4%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++ + +WNVN +RA           E + D  CLQETK ++        +    +     
Sbjct: 2   IMKLISWNVNGLRACCDKGFREIFNELDADFFCLQETKMQEGQLDL-AFEGYTSYWNYAE 60

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G AI +++QP+ +   L  D+ D + R I      N   + +       G     
Sbjct: 61  KKGYSGTAIFTRHQPLSVTYGLGIDEHDHEGRVITLEME-NFYLVTVYTPNSQDGLKRLD 119

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            +        +   R    +L+ ++P++  GD N+  +  D  NP     +A FT + R+
Sbjct: 120 YR-----MTWEEDFRKYLLQLDRQKPVLVCGDLNVAHKEIDLKNPKTNRMNAGFTDQERE 174

Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            FQ L + GF D  R  +    ++YS+W Y   +  KN G RID+ + S      L  A+
Sbjct: 175 KFQLLLDAGFIDTFRHFYPTQENIYSWWSYRFKAREKNAGWRIDYFLASSRIADKLQDAK 234

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263
           I T+  G    SDH PV V+++ 
Sbjct: 235 IHTEIFG----SDHCPVEVTINW 253


>gi|167767320|ref|ZP_02439373.1| hypothetical protein CLOSS21_01839 [Clostridium sp. SS2/1]
 gi|167711295|gb|EDS21874.1| hypothetical protein CLOSS21_01839 [Clostridium sp. SS2/1]
 gi|291559374|emb|CBL38174.1| exodeoxyribonuclease III [butyrate-producing bacterium SSC/2]
          Length = 250

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 65/261 (24%), Positives = 111/261 (42%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN IRA +      +  E + DI C+QE+K ++       L   + +     +
Sbjct: 1   MKFISWNVNGIRACVKKGFLDFFNETDADIFCIQESKMQEGQLDLN-LPGYHQYWNYAVK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G  I +K +PI +   L  ++ D + R I   F                   ++  
Sbjct: 60  KGYSGTGIFTKEEPISVFYGLGIEEHDQEGRVITLEFKDYYFITVYTPNSQSELARLSYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +       ++LE ++P+IF GD N+  +  D  NP     +A FT E R+ 
Sbjct: 120 M------KWEEDFLAYLKKLEEKKPVIFCGDLNVAVEEIDLKNPKTNRKNAGFTDEEREK 173

Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
            + + + GF D  R  +     +YS+W Y  ++   N G RID+ ++S      +  A+I
Sbjct: 174 MRTILSNGFIDTFRYLYPDQTGIYSWWSYRFNARKNNAGWRIDYFIVSECLKDRISDAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            T   G    SDH P+ +   
Sbjct: 234 LTDVMG----SDHCPIELDFK 250


>gi|304384068|ref|ZP_07366522.1| exodeoxyribonuclease III [Prevotella marshii DSM 16973]
 gi|304334784|gb|EFM01060.1| exodeoxyribonuclease III [Prevotella marshii DSM 16973]
          Length = 250

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 66/261 (25%), Positives = 111/261 (42%), Gaps = 12/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +  +     +  + D  CLQETK ++     +  +    +     +
Sbjct: 1   MKFVSWNVNGLRACVGKSFEESFRMLDADFFCLQETKMQEGQLNLQ-FEGYEAYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +++QP  +   +  +  D + R I                       +   
Sbjct: 60  KGYSGTAIYTRHQPQSVSYGMGVEAHDHEGRIITLEMPGFYLVTVYTPNSQDGLKRLAYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +       ++L+ ++P+I  GD N+  +  D  NP    ++A FT E R  
Sbjct: 120 MQ------WEEDFLQYIKKLDAKKPVIICGDMNVAHEEIDIKNPKTNRHNAGFTDEERNK 173

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F  L + GFTD  R  +     YS+W Y   + +KN G RID+ ++S      +  A+I 
Sbjct: 174 FTTLLSEGFTDTFRYKYPEQVRYSWWSYRFQARAKNAGWRIDYFVVSNRLKPQIIDAKIH 233

Query: 243 TKPRGWTKPSDHTPVIVSLDI 263
           T   G    SDH PV V L++
Sbjct: 234 TAILG----SDHCPVEVELNL 250


>gi|15594879|ref|NP_212668.1| exodeoxyribonuclease III (exoA) [Borrelia burgdorferi B31]
 gi|195941668|ref|ZP_03087050.1| exodeoxyribonuclease III (exoA) [Borrelia burgdorferi 80a]
 gi|216264267|ref|ZP_03436259.1| exodeoxyribonuclease III [Borrelia burgdorferi 156a]
 gi|223888847|ref|ZP_03623438.1| exodeoxyribonuclease III [Borrelia burgdorferi 64b]
 gi|224532684|ref|ZP_03673301.1| exodeoxyribonuclease III [Borrelia burgdorferi WI91-23]
 gi|225548581|ref|ZP_03769628.1| exodeoxyribonuclease III [Borrelia burgdorferi 94a]
 gi|226321012|ref|ZP_03796557.1| exodeoxyribonuclease III [Borrelia burgdorferi 29805]
 gi|226321840|ref|ZP_03797366.1| exodeoxyribonuclease III [Borrelia burgdorferi Bol26]
 gi|2688454|gb|AAC66902.1| exodeoxyribonuclease III (exoA) [Borrelia burgdorferi B31]
 gi|215980740|gb|EEC21547.1| exodeoxyribonuclease III [Borrelia burgdorferi 156a]
 gi|223885663|gb|EEF56762.1| exodeoxyribonuclease III [Borrelia burgdorferi 64b]
 gi|224512302|gb|EEF82686.1| exodeoxyribonuclease III [Borrelia burgdorferi WI91-23]
 gi|225370611|gb|EEH00047.1| exodeoxyribonuclease III [Borrelia burgdorferi 94a]
 gi|226233029|gb|EEH31782.1| exodeoxyribonuclease III [Borrelia burgdorferi Bol26]
 gi|226233613|gb|EEH32349.1| exodeoxyribonuclease III [Borrelia burgdorferi 29805]
          Length = 255

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 59/260 (22%), Positives = 104/260 (40%), Gaps = 12/260 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCG 61
           + + +WNVN IRA +      ++KE  PDI+C+QETK   +  P + +    Y +     
Sbjct: 1   MKLISWNVNGIRAVLKKGFLEFVKEYTPDILCIQETKALREQLPKDLILENYYSYFSNSK 60

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
            K Y+GV I SK +PI +         +     +            I        + +  
Sbjct: 61  IKGYSGVCIYSKVEPISVRLLGEEIFDNEGRGLVACYDDF------ILVNGYFPNSQVLR 114

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            +   K+ ++      A   +   + ++  GD+NI     D  +P    +   + +E   
Sbjct: 115 RRLGYKLDFLSYVENLADSLVCDGKNVVICGDFNIAHTEIDLISPDSNRDSPGYYIEETT 174

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
                 N G+ D  R  +     Y++W Y   +  +N G RID+ +++      +  + I
Sbjct: 175 WLDDFLNKGYVDTFRIFNKDPGYYTWWSYRTRARERNMGWRIDYFIVNEFFKRNVEKSLI 234

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
             K  G    SDH PV + L
Sbjct: 235 LDKVMG----SDHCPVFLEL 250


>gi|145589433|ref|YP_001156030.1| exodeoxyribonuclease III Xth [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145047839|gb|ABP34466.1| Exodeoxyribonuclease III [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 282

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 83/275 (30%), Positives = 135/275 (49%), Gaps = 17/275 (6%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENN-----PDIICLQETKTEDKNFPFETLQSLNYHIE 58
           + +A WNVNS++ R+ ++  W+K+        D +CLQE K  D  +P + L+   Y   
Sbjct: 5   IRIAAWNVNSLKVRLPHVIRWLKDQEQANQPIDALCLQELKLTDDKYPHQELEDEGYVSL 64

Query: 59  TCGQKSYNGVAILSKY------------QPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
             GQK+YNGVAI+ +               ++   ++PG + + Q            Q +
Sbjct: 65  AAGQKTYNGVAIIVRKAALAPIASDESTTFLKQARNIPGFEDEQQRILAATIPFAGMQPI 124

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
           R+ + Y P+G    S K+  K++W++    +  Q L+    L   GD+NI P   D ++P
Sbjct: 125 RLISAYFPNGQSPDSDKFAYKLNWMQSLEDWLVQELQSNTRLALLGDFNIAPADADVHDP 184

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226
             WE     +   R +F+ L  +G  D+ R    T   YS+WDY    + +N G+RIDHI
Sbjct: 185 KAWEGQNLVSPPERAAFESLIKLGLCDSFRIFEQTPKTYSWWDYRMMGFRRNAGMRIDHI 244

Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           +LS        ++ +D  PR W +PSDH PV+  +
Sbjct: 245 LLSDPLKEKCSASFVDKLPRSWEQPSDHAPVVAEI 279


>gi|257867352|ref|ZP_05647005.1| exodeoxyribonuclease [Enterococcus casseliflavus EC30]
 gi|257873685|ref|ZP_05653338.1| exodeoxyribonuclease [Enterococcus casseliflavus EC10]
 gi|257801408|gb|EEV30338.1| exodeoxyribonuclease [Enterococcus casseliflavus EC30]
 gi|257807849|gb|EEV36671.1| exodeoxyribonuclease [Enterococcus casseliflavus EC10]
          Length = 252

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 71/263 (26%), Positives = 117/263 (44%), Gaps = 13/263 (4%)

Query: 4   VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA    N +   +  + D  CLQETK ++     + L   + +     +
Sbjct: 1   MKFISWNVNGLRAIVKKNFSEVFEALDADFFCLQETKLQEGQIELD-LPGYHQYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K   + +   L  ++ D + R I   +                 +     
Sbjct: 60  KGYSGTAIFAKEPALSVRYGLGIEEHDTEGRVITLEYPEF-----FLITCYTPNSQNELR 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           + D +++W   FL +    L+ ++P+I  GD N+  +  D  N    +  A FT E R+ 
Sbjct: 115 RLDYRMTWEDAFLAY-LTELKQQKPVILCGDLNVAHKNIDIKNWKTNQKSAGFTPEEREK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F  L   GFTD  R  +     +YS+W Y  ++   N G RID+ ++S +    L  A+I
Sbjct: 174 FSTLLAAGFTDTFRYFYPDAEGIYSWWSYRFNARKNNAGWRIDYFVVSDDLNESLLDAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLDIP 264
            T   G    SDH PV + L+ P
Sbjct: 234 HTDIIG----SDHCPVELDLNYP 252


>gi|146337348|ref|YP_001202396.1| putative exodeoxyribonuclease III (xthA) [Bradyrhizobium sp.
           ORS278]
 gi|146190154|emb|CAL74146.1| putative exodeoxyribonuclease III (xthA) [Bradyrhizobium sp.
           ORS278]
          Length = 271

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 76/271 (28%), Positives = 121/271 (44%), Gaps = 11/271 (4%)

Query: 4   VTVA--TWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETC 60
           + +   TWN+NS+R RI  +A +IK+  PD++CLQETK  D  FP +  + L Y H+   
Sbjct: 1   MRLVLTTWNINSVRLRIDLVAKFIKQVRPDVLCLQETKCIDDAFPLKRFKRLGYEHVALN 60

Query: 61  GQKSYNGVAILSKYQPIEIV-THLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
           GQK Y+GVA++SK+                              Q L + N Y+P G  I
Sbjct: 61  GQKGYHGVAVISKWPFESTHVRTFCDKVDSRHITVAFGEKAQLAQPLVLHNFYVPAGGDI 120

Query: 120 T----STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
                + K++ K+ ++             ++  I  GD N+ P  HD ++          
Sbjct: 121 PDPALNPKFEHKLQFLDEMKACEPLHPRGDDRHILVGDLNVAPHEHDVWSHKQLLKVVSH 180

Query: 176 TLEVRQSFQKLQNMGFTDAI--RATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEA 232
           T    +     Q+ G    +       +  +Y++W Y A  W+  ++G R+DHI +S   
Sbjct: 181 TPIETEKLLAAQSHGEWVDVARERIPMSEKVYTWWSYRAADWTVGDRGRRLDHIWVSRAL 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              +    I    R W +PSDH PV V+LD+
Sbjct: 241 KDRVSDFDILRDARSWERPSDHVPVTVTLDV 271


>gi|227874120|ref|ZP_03992326.1| exodeoxyribonuclease III [Oribacterium sinus F0268]
 gi|227840032|gb|EEJ50456.1| exodeoxyribonuclease III [Oribacterium sinus F0268]
          Length = 254

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 67/265 (25%), Positives = 116/265 (43%), Gaps = 13/265 (4%)

Query: 1   MSVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           M +  + +WNVN +RA +  N     K  + D+ CLQETK ++     + L     +   
Sbjct: 1   MFMKKLISWNVNGLRAVMGKNFMEDFKRLDADMFCLQETKLQEGQIDLD-LPGYFQYWNY 59

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G AI +K +P+ +   +  ++ D + R I   +                   +
Sbjct: 60  AVKKGYSGTAIFTKEEPLSVQYGIGVEEHDQEGRVITLEYPEFYLITVYVPNSQGELKRL 119

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                       +         LE ++P+I+ GD N+  +  D  NP     +A F+ E 
Sbjct: 120 PYRM------KFEDAFLNYILTLEKKKPVIYCGDLNVAHEEIDLKNPDSNHMNAGFSDEE 173

Query: 180 RQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R  F ++ + G+ D+ R  +      YS+W Y   +  +N G RID+ ++S +    L S
Sbjct: 174 RAKFSRVLDSGYLDSFRHFYPNKEEEYSWWSYRTKARDRNVGWRIDYFVVSKQLEKKLLS 233

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263
           A I  +  G    SDH PV ++LD+
Sbjct: 234 ASIHQEVMG----SDHCPVEITLDL 254


>gi|256380462|ref|YP_003104122.1| exodeoxyribonuclease III Xth [Actinosynnema mirum DSM 43827]
 gi|255924765|gb|ACU40276.1| exodeoxyribonuclease III Xth [Actinosynnema mirum DSM 43827]
          Length = 264

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 61/267 (22%), Positives = 110/267 (41%), Gaps = 13/267 (4%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++TV+T NVN +RA        W+     D++CLQE + E      E      +H     
Sbjct: 1   MLTVSTVNVNGLRAAAKKGYLEWLAATGADVVCLQEVRAEPGQLADEVRDPEGWHSAHAH 60

Query: 62  --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
              K  +GVA+L++ QP  +      ++ +   R++E   T       +          +
Sbjct: 61  SAVKGRSGVAVLTREQPTAVRVGFGVEEFEHSGRYVEVELTG-----LVVGSLYLPSGEV 115

Query: 120 TSTKYDDKISWIKRFLRF----ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
            + + D+K  ++  FL +      +       ++  GD+NI  +  D  +    +  A F
Sbjct: 116 GTERQDEKDRFMAAFLPYLVELREKAAADGREVLVCGDWNIAHRQADLKSWKTNQKSAGF 175

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
               R+    +   G+TD +RA H      YS+W Y   ++  + G RID+ + S    +
Sbjct: 176 LPYEREWLGSVFESGYTDVVRALHPDVEGPYSWWSYRGKAFDNDSGWRIDYQVASEGLAA 235

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261
              +A ++       + SDH PV V  
Sbjct: 236 RAETAVVERAATYAERWSDHAPVTVEY 262


>gi|29830170|ref|NP_824804.1| exodeoxyribonuclease [Streptomyces avermitilis MA-4680]
 gi|29607280|dbj|BAC71339.1| putative exodeoxyribonuclease [Streptomyces avermitilis MA-4680]
          Length = 287

 Score =  184 bits (467), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 58/268 (21%), Positives = 100/268 (37%), Gaps = 8/268 (2%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           V+TV + NVN +RA        W+ E + D++CLQE + E    P        +H+    
Sbjct: 21  VLTVTSVNVNGLRAAAKKGFVEWLAETSADVLCLQEVRAEPDQLPAGVRAPDGWHVVHAP 80

Query: 62  Q--KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
              K   GV++ ++ +P  +       + D   R++EA     T    +       G   
Sbjct: 81  AAAKGRAGVSLYTRREPDRVRVGFGSAEFDGGGRYVEADLPGVTVA-SLYLPSGEVGTER 139

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              KY     ++        +       ++  GD+NI  Q  D  N      +A F  E 
Sbjct: 140 QDEKYRFMGEFLTHLKDLRERAAADGREVLVCGDWNIAHQEADLKNWRGNRKNAGFLPEE 199

Query: 180 RQSFQKL----QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
           R+   ++                 D    YS+W Y   ++  + G RID+ + +P   + 
Sbjct: 200 REWLGRVLSPEDGGYVDVMRALHPDVEGPYSWWSYRGRAFDNDSGWRIDYEVATPGLAAK 259

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                ++       + SDH PV V  D+
Sbjct: 260 AVKGFVERAATHEERWSDHAPVTVVYDL 287


>gi|212550466|ref|YP_002308783.1| exodeoxyribonuclease III [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|212548704|dbj|BAG83372.1| exodeoxyribonuclease III [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 253

 Score =  184 bits (466), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 76/262 (29%), Positives = 121/262 (46%), Gaps = 13/262 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH---IET 59
           + + ++NVN IR+ I   L  W+ + +PDI C+QE K + +     + QSL Y+   + +
Sbjct: 1   MKIISFNVNGIRSAINKGLIEWLDKESPDIFCVQEIKAQREQIDILSFQSLGYNYQLVHS 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GVAI SK  P      +     D + R I A F      L I  +Y+P G   
Sbjct: 61  ARRKGYSGVAIFSKTCPNTYSFGMNKYSFDNEGRVIRADF----NNLTIICVYVPSG-TT 115

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +   K+ ++  F  +          L+  GDYNI  Q  D   P      + F  E 
Sbjct: 116 GKVRQAIKMEFLDTFTTYLLNLQRERPYLLVCGDYNICRQDRDINYPERHMGVSGFLPEE 175

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R  F      GF D+ R  +   + YS+W Y +++ +KN G RID+ +++    S L SA
Sbjct: 176 RAWFDYFIRCGFVDSFREFNQDKNQYSWWSYRSNARAKNLGWRIDYHIITRNLQSQLKSA 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261
            +  +     + SDH P++V  
Sbjct: 236 SLLQEI----EISDHCPIVVEF 253


>gi|315605812|ref|ZP_07880844.1| exodeoxyribonuclease III [Actinomyces sp. oral taxon 180 str.
           F0310]
 gi|315312510|gb|EFU60595.1| exodeoxyribonuclease III [Actinomyces sp. oral taxon 180 str.
           F0310]
          Length = 271

 Score =  184 bits (466), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 73/272 (26%), Positives = 119/272 (43%), Gaps = 18/272 (6%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +  ATWNVNSIR RI  + A+++ ++ DI+ +QE K     FP    +   Y +   G  
Sbjct: 1   MRFATWNVNSIRTRIDRVIAFLERSDTDILAMQEIKCRPDQFPTAPFEEAGYQVAVHGLN 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL--------------RIG 109
            +NGVA+ S+    ++  H P      +   +EA     T  +               I 
Sbjct: 61  QWNGVAVASRLAITDVRDHFPHQPSFGEPATVEARALGVTVDVTGVLEAREGSPSSLTIW 120

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEP-LIFAGDYNIIPQPHDCYNPII 168
           +LY+P+G  + +  Y  K+ W+          L   +  +   GD+N+ P   D ++  +
Sbjct: 121 SLYVPNGRELDNPHYAYKLDWLATLAEQGRTWLSDSQALIALVGDWNVAPHDEDVWDMSV 180

Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
           +E     +   R +F   +  G+ +  R   D    Y++WDY    + KN+G+RID    
Sbjct: 181 FEGSTHVSRAERDAFAAFERDGWVEVTR---DRVTNYTYWDYQKLRFPKNQGMRIDFAYC 237

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
           S    + +  A ID   R     SDH PVIV 
Sbjct: 238 SAPLAARVTGAHIDRDERKGKGASDHVPVIVD 269


>gi|308070428|ref|YP_003872033.1| Exodeoxyribonuclease [Paenibacillus polymyxa E681]
 gi|305859707|gb|ADM71495.1| Exodeoxyribonuclease [Paenibacillus polymyxa E681]
          Length = 254

 Score =  184 bits (466), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 72/260 (27%), Positives = 115/260 (44%), Gaps = 13/260 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      ++KE N DI C+QETK ++     E ++    +     +
Sbjct: 1   MKLISWNVNGLRACVTKGFYTYLKETNADIFCVQETKLQEGQILMENMEEYTQYWNYAEK 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +P+ +   L  ++                  +   N           +
Sbjct: 61  KGYSGTAIFTKIKPLSVHYGLEENEEPEGRTITLEFENFYLVNVYTPNT------KRDLS 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +   ++ W  RF  +  Q+L+  +P+I  GD N+  Q  D  N      +A FT E R+ 
Sbjct: 115 RLPYRLEWEDRFRSY-LQQLDALKPVIVCGDLNVAHQEIDLKNAKANYGNAGFTPEERER 173

Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
              L + GF D  R  +     +YS+W Y      +N G RID+ ++S     LL  A I
Sbjct: 174 MSLLLDAGFIDTFRTFYPDRTDVYSWWSYMPKVRERNIGWRIDYFLVSERLRPLLMDASI 233

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
           D    G    SDH PVI+ L
Sbjct: 234 DCHITG----SDHCPVILDL 249


>gi|229544130|ref|ZP_04433189.1| exodeoxyribonuclease III [Bacillus coagulans 36D1]
 gi|229325269|gb|EEN90945.1| exodeoxyribonuclease III [Bacillus coagulans 36D1]
          Length = 251

 Score =  184 bits (466), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 64/259 (24%), Positives = 109/259 (42%), Gaps = 13/259 (5%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +     A+  E + DI C+QETK +      + L     +     +
Sbjct: 1   MKFVSWNVNGLRACVKKGFLAFFAETDADIFCVQETKLQAGQIALD-LDGYYQYWNYAER 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G A+ +K +P+ +   +  D  + + R +   +        + N+Y P+     + 
Sbjct: 60  KGYSGTAVFTKKEPLSVRYGVGEDRTEPEGRILTLEYE----DFYLVNVYTPNSQRDLAR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                       +R     L+ ++P+I  GD N+  Q  D  N      ++ FT E R  
Sbjct: 116 LGYRLEWE--DRMRAYLTELDKKKPVIVCGDMNVAHQEIDLKNAKNNVGNSGFTAEERGK 173

Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
              L N GF D+ R  +      Y++W Y      +N G RID+ ++S      L  A +
Sbjct: 174 MTGLLNSGFIDSFRYFYPEREGAYTWWSYMNKVRERNIGWRIDYFLVSKRLAGRLKDAGM 233

Query: 242 DTKPRGWTKPSDHTPVIVS 260
             +  G    SDH PV + 
Sbjct: 234 YPEIMG----SDHCPVFLE 248


>gi|225569150|ref|ZP_03778175.1| hypothetical protein CLOHYLEM_05230 [Clostridium hylemonae DSM
           15053]
 gi|225161949|gb|EEG74568.1| hypothetical protein CLOHYLEM_05230 [Clostridium hylemonae DSM
           15053]
          Length = 250

 Score =  184 bits (466), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 72/260 (27%), Positives = 114/260 (43%), Gaps = 13/260 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN IRA +      + +E + DI C+QETK ++     ET      +     +
Sbjct: 1   MKCISWNVNGIRACVQKGFMDFFQEADADIFCIQETKMQEGQLELET-PGYFQYWNYAER 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G A+ +K +P+     +  ++ D + R I   F                   ++  
Sbjct: 60  KGYSGTAVFTKKEPLSFTCGIGIEEHDKEGRVITLEFEEFYFVTVYTPNSQSELARLSYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +       ++LE ++P+IF GD N+  +  D  NP     +A FT E R+ 
Sbjct: 120 M------EWEDAFLAYLKKLEEKKPVIFCGDLNVAAEEIDLKNPKTNRKNAGFTDEEREK 173

Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F+K++  GF D  R  +     +YS+W Y   +  KN G RID+  +S      L  ARI
Sbjct: 174 FRKIKASGFVDTFRYFYPDEEGIYSWWSYRFRAREKNAGWRIDYFCVSQSLKERLEDARI 233

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
            T   G    SDH PV + L
Sbjct: 234 HTDVMG----SDHCPVELDL 249


>gi|90421064|ref|ZP_01228967.1| exodeoxyribonuclease III [Aurantimonas manganoxydans SI85-9A1]
 gi|90334699|gb|EAS48476.1| exodeoxyribonuclease III [Aurantimonas manganoxydans SI85-9A1]
          Length = 268

 Score =  184 bits (466), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 81/266 (30%), Positives = 124/266 (46%), Gaps = 9/266 (3%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQK 63
           T+ATWN+NS+R R+  +   ++E  PDI+CLQETK  +  FP +  ++L Y HI   GQK
Sbjct: 4   TIATWNINSVRLRMPLVQRLLEERKPDILCLQETKCPNDQFPEKAFKALGYEHIAIHGQK 63

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            Y+GVA +SK    +IV           AR +    +I  + LR+ N Y+P G    + +
Sbjct: 64  GYHGVATVSKQPFDDIVRQDFCQIG--DARHLSTRLSIGGRRLRVHNFYVPAGGDEPNPE 121

Query: 124 YDDKISWIKRFLRFAS---QRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
            + K      F+          E     +  GD NI P   D ++          T    
Sbjct: 122 VNVKFKHKLDFIEEMRLISAEAEPGVSSLLVGDLNIAPFETDVWSHKQLLKVVSHTPIEC 181

Query: 181 QSFQKLQNMGFTDAIRATH--DTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLLH 237
           +   + Q  G    +   H      L+++W Y +  W + N+G R+DHI  S +    L 
Sbjct: 182 EGLLRAQADGRWTDLMRHHVPMDEQLFTWWSYRSKDWAASNRGRRLDHIWGSQDLAPALT 241

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +  + +  R W +PSDH PV+ S DI
Sbjct: 242 AIDVMSAARSWERPSDHVPVLASFDI 267


>gi|149918584|ref|ZP_01907073.1| exodeoxyribonuclease III [Plesiocystis pacifica SIR-1]
 gi|149820660|gb|EDM80072.1| exodeoxyribonuclease III [Plesiocystis pacifica SIR-1]
          Length = 262

 Score =  184 bits (466), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 83/257 (32%), Positives = 124/257 (48%), Gaps = 5/257 (1%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSY 65
           + TWNVNS+RAR+ N+  ++ E+ PD+ CLQETK E+  FP      L Y +   G K Y
Sbjct: 7   LMTWNVNSVRARLDNVLTYLDEHEPDVACLQETKVENALFPRVPFMELGYQVALNGTKGY 66

Query: 66  NGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124
            GVA L K  +P+++         D   R +  T+      +RI NLY P+G  + S  +
Sbjct: 67  AGVATLVKGQKPVDVQLGFAEGPEDKHKRILALTYEG----VRIYNLYAPNGTALGSEAF 122

Query: 125 DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ 184
             K+ W  R       R    + ++  GD+NI     D ++    +    FT E   +  
Sbjct: 123 AYKLDWFARLRGELDARFGPSDEVVLCGDFNIARDARDTWSVESMKGGTHFTPEEHAALD 182

Query: 185 KLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK 244
            L+N G  D  R   D    ++++DY   SW K  G+RID++  +  AT        D +
Sbjct: 183 ALENFGLHDCFRKFDDAPGRFTWFDYRGGSWEKKHGLRIDYVYATAPATERCTEVVHDWE 242

Query: 245 PRGWTKPSDHTPVIVSL 261
           PR W +PSDH PV+   
Sbjct: 243 PRAWDEPSDHVPVVARF 259


>gi|293400493|ref|ZP_06644638.1| exodeoxyribonuclease III [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291305519|gb|EFE46763.1| exodeoxyribonuclease III [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 253

 Score =  184 bits (466), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 71/261 (27%), Positives = 111/261 (42%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN IRA +      + +E + DI C+QETK +       T     Y I +  +
Sbjct: 3   MKMVSWNVNGIRACMTKGFMDFFQEIDADIFCIQETKMQPGQLDIATPGYYQY-INSADK 61

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G  + +K +PI +   L  D+ D + R I   +                   +   
Sbjct: 62  KGYSGTMVFTKEKPIAVTYDLGIDEHDHEGRVITCEYENFYLVCVYTPNSKDGLLRLDYR 121

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +   R     L+ ++ +I  GD N+  +  D  NP     +A FT E R  
Sbjct: 122 MQ------WEDDFRAYLNALKEKKSVIVCGDLNVAHKEIDLKNPKTNRRNAGFTDEERAK 175

Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
              LQ  GF D+ R  +     +YS+W Y   +  KN G RID+ ++S +A   +  A I
Sbjct: 176 MTTLQQSGFIDSFRYLYPEQEGIYSWWSYRFKAREKNAGWRIDYFLVSEDAKDKIQEASI 235

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            T   G    SDH PV + +D
Sbjct: 236 HTDVFG----SDHCPVSLDID 252


>gi|302345223|ref|YP_003813576.1| exodeoxyribonuclease III [Prevotella melaninogenica ATCC 25845]
 gi|302150206|gb|ADK96468.1| exodeoxyribonuclease III [Prevotella melaninogenica ATCC 25845]
          Length = 249

 Score =  184 bits (466), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 68/260 (26%), Positives = 111/260 (42%), Gaps = 12/260 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +        K+ + D  CLQETK +              +     +
Sbjct: 1   MKFISWNVNGLRACVGKEFEQQFKDLDADFFCLQETKMQAGQLDLS-FPGYESYWNYADK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K++P+ +   +  D+ D + R I      +   + +       G      
Sbjct: 60  KGYSGTAIYTKHKPLSVTYGIDIDEHDHEGRVITLEME-DFYLVTVYTPNSQDGLRRL-- 116

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
              +     +   +    +L+ ++P+I  GD N+  Q  D  NP     +A FT E R+ 
Sbjct: 117 ---EYRMKWEDDFQAYLHKLDEKKPVIVCGDMNVAHQEIDLKNPKTNHKNAGFTDEEREK 173

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
             +L + GF D  R  +     YS+W Y   +  KN G RID+ ++S      L  A+I 
Sbjct: 174 MTQLLSNGFIDTFRTLYPEQVTYSWWSYRFRAREKNTGWRIDYFLISERLKDRLEDAKIH 233

Query: 243 TKPRGWTKPSDHTPVIVSLD 262
           T+  G    SDH PV + L 
Sbjct: 234 TEIMG----SDHCPVEIILK 249


>gi|311032922|ref|ZP_07711012.1| exodeoxyribonuclease III [Bacillus sp. m3-13]
          Length = 254

 Score =  184 bits (466), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 60/261 (22%), Positives = 105/261 (40%), Gaps = 10/261 (3%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN IRA +      +  + + DI C+QETK ++     +T     Y      +
Sbjct: 1   MKLVSWNVNGIRACVKKGFMDYFNDMDADIFCIQETKLQEGQIDLDTPGYYQY-WNYAIK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G A+ +K +P+++   L     +                  +          +   
Sbjct: 60  KGYSGTAVFTKMKPLQVRYGLDEKKAEECEPEGRILTLEYEDFFLVNVYTPNSQRDLARL 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
            +       +       + L+ ++ +I  GD N+     D  NP    N++ FT E R  
Sbjct: 120 PFR---LDWEDRFLAYIKMLDQQKSVIVCGDLNVAHAEIDLKNPKSNRNNSGFTEEERGK 176

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             +L   GF+D  R  +      Y++W Y      +N G RID+ ++S      L  A I
Sbjct: 177 MTRLLGEGFSDTFRHFYPELTDKYTWWSYMNKVRERNIGWRIDYFIVSDNLKGSLKDAEI 236

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            +   G    SDH PV++ L+
Sbjct: 237 HSDIMG----SDHCPVVLILN 253


>gi|257897862|ref|ZP_05677515.1| AP endonuclease [Enterococcus faecium Com15]
 gi|257835774|gb|EEV60848.1| AP endonuclease [Enterococcus faecium Com15]
          Length = 250

 Score =  184 bits (466), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 70/261 (26%), Positives = 113/261 (43%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +  N   +  E + D  CLQETK +      + L     +     +
Sbjct: 1   MKFISWNVNGLRAIVNKNFLEFFHELDADFFCLQETKLQAGQIDLD-LPGYYQYWNYAER 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K   +     +  D  D + R I   ++                +     
Sbjct: 60  KGYSGTAIFAKEPALNATYGMGIDIHDTEGRLITLEYSDF-----FLVTCYTPNSQSELK 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           + D ++ W + F  +    L+ ++P+I  GD N+  Q  D  N    + +A FT E R +
Sbjct: 115 RLDYRLEWEEAFYNYLEN-LKKQKPVIVCGDLNVAHQTIDLKNWKTNQKNAGFTPEERAA 173

Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             +L + GF D  R  +     +YS+W+Y  +S   N G RID+ + S +    L  A+I
Sbjct: 174 LSRLLDNGFIDTFRYFYPTQEGVYSWWNYRFNSRKNNAGWRIDYFLTSKDLAPRLADAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            T   G    SDH PV + L 
Sbjct: 234 HTDIMG----SDHCPVELDLK 250


>gi|118602958|ref|YP_904173.1| exodeoxyribonuclease III [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|118567897|gb|ABL02702.1| exodeoxyribonuclease III [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
          Length = 256

 Score =  184 bits (466), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 60/261 (22%), Positives = 102/261 (39%), Gaps = 9/261 (3%)

Query: 5   TVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
            + T NVN IRA        WIK  N D+ICLQETK ++     E      YH      K
Sbjct: 3   RIITANVNGIRAAEQKGFFDWIKIQNADVICLQETKAQENQLD-ERFYPKEYHCYYQSAK 61

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
                   +     ++   +          F       + + L + ++Y+  G+     +
Sbjct: 62  KKG--YSGTAIFTKQVPIQVIKKSPWENINFEGRFIRADFEDLSVISIYIHSGSVKQKRQ 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVRQS 182
                   +RF+ +  +       +I  GD NI+ Q  D  N    + ++     E    
Sbjct: 120 DLKMAFLTERFMPYLQEIKISGRKVIICGDMNIVHQERDIKNWKANQKNSGCLPKERAWL 179

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
            +    +GF D+ R  +     Y++W     +W+ N G RID+ +L+P     + S  I 
Sbjct: 180 DELFFEVGFIDSFREVNQEERQYTWWSNRGQAWANNVGWRIDYQILTPNLKDTIKSVSIY 239

Query: 243 TKPRGWTKPSDHTPVIVSLDI 263
              R     SDH P+I++ ++
Sbjct: 240 KDER----FSDHAPLIINYNL 256


>gi|134045625|ref|YP_001097111.1| exodeoxyribonuclease III Xth [Methanococcus maripaludis C5]
 gi|132663250|gb|ABO34896.1| exodeoxyribonuclease III Xth [Methanococcus maripaludis C5]
          Length = 249

 Score =  184 bits (466), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 69/260 (26%), Positives = 117/260 (45%), Gaps = 12/260 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN IRA +      ++K  +PD++C+QETK +        L     +     +
Sbjct: 1   MKMLSWNVNGIRACLKNGFMDFLKRESPDVMCIQETKVQSGQVQL-GLDGYFQYWNYAER 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G A+ +K +P E++  +   + + + R I   F      + +       G      
Sbjct: 60  KGYSGTAVFTKIKPNEVIYGIKNSEHNGEGRVITLKFDEY-YLVNVYTPNSQRGLTRLKY 118

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +         +      + LE ++P+IF GD N+  +  D  NP     +A FT E R+ 
Sbjct: 119 RQ-----KWDQDFLNYVKTLENKKPVIFCGDLNVAHKEIDLKNPKTNVKNAGFTPEERKG 173

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F  + N GF D  R  +     YS+W Y  ++ ++N G RID+  +S    + L  A I 
Sbjct: 174 FDNIVNSGFLDTFREFNKEPDNYSWWSYRFNARARNIGWRIDYFCISESLRNNLKDAFIM 233

Query: 243 TKPRGWTKPSDHTPVIVSLD 262
           ++  G    SDH PV +  D
Sbjct: 234 SEIMG----SDHCPVGIIFD 249


>gi|15966954|ref|NP_387307.1| putative exodeoxyribonuclease III protein [Sinorhizobium meliloti
           1021]
 gi|307301727|ref|ZP_07581486.1| exodeoxyribonuclease III [Sinorhizobium meliloti BL225C]
 gi|307316249|ref|ZP_07595693.1| exodeoxyribonuclease III [Sinorhizobium meliloti AK83]
 gi|15076227|emb|CAC47780.1| Putative exodeoxyribonuclease III [Sinorhizobium meliloti 1021]
 gi|306898089|gb|EFN28831.1| exodeoxyribonuclease III [Sinorhizobium meliloti AK83]
 gi|306903425|gb|EFN34014.1| exodeoxyribonuclease III [Sinorhizobium meliloti BL225C]
          Length = 268

 Score =  184 bits (466), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 71/266 (26%), Positives = 110/266 (41%), Gaps = 6/266 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +++ATWN+NS+R R+  +  ++K   PDI+CLQE K  +  FP   L+ L Y       +
Sbjct: 3   LSIATWNINSVRLRMPLVEHFLKTWQPDILCLQEIKCRNDQFPSAPLRKLGYEYIEMHGQ 62

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
                       P+  ++          AR +   F    +T+R+ N Y+P G       
Sbjct: 63  KGYHGVATISRLPLHELSDRRDYCGVGDARHLSVVFAAGGKTIRLHNFYVPAGGDEPDRT 122

Query: 124 YDDKISWIKRFLRFASQRL---ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
            + K      F+          E     I  GD NI P  HD ++          T    
Sbjct: 123 VNPKFGHKLDFVDEMKLLHAEAEAGVSSILVGDLNIAPLEHDVWSHKQLLKIVSHTPVET 182

Query: 181 QSFQKLQNMGFTDAIRATH--DTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLLH 237
           +    +   G    +   H      LY++W Y A  W + ++G R+DHI  S +  S L 
Sbjct: 183 EGLVSVMTGGAWVDLMRRHAPPPEKLYTWWSYRAKDWTAADRGRRLDHIWSSADLASQLV 242

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263
              I  + RGW +PSDH PVI   ++
Sbjct: 243 RVEILKEARGWERPSDHVPVIAHFEL 268


>gi|282877708|ref|ZP_06286523.1| exodeoxyribonuclease III [Prevotella buccalis ATCC 35310]
 gi|281300280|gb|EFA92634.1| exodeoxyribonuclease III [Prevotella buccalis ATCC 35310]
          Length = 249

 Score =  184 bits (466), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 69/259 (26%), Positives = 105/259 (40%), Gaps = 12/259 (4%)

Query: 4   VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +     A     + D  CLQETK +      +  +    +     +
Sbjct: 1   MKFISWNVNGLRACVKKDFEASFHHLDADFFCLQETKMQAGQLDLQ-FEGYQSYWNYADK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K+ P+ +   L  D+ D + R I                       +   
Sbjct: 60  KGYSGTAIYTKHTPLNVTYGLGIDEHDHEGRVITMEMDDFFLITVYVPNSQDELRRLDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +   R    +L+  +P+I  GD N+  +  D  NP     +A FT E R+ 
Sbjct: 120 MQ------WEDDFRAYVMQLDAIKPVIICGDLNVAHEEIDLKNPKTNRRNAGFTDEEREK 173

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
              L N GF D  R  +     YS+W Y   +  KN G RID+ ++S      L  A+I 
Sbjct: 174 MTILLNNGFVDTFRHLYPEQVTYSWWSYRFRAREKNAGWRIDYFLISERLKERLVDAKIH 233

Query: 243 TKPRGWTKPSDHTPVIVSL 261
           T+  G    SDH PV + L
Sbjct: 234 TEILG----SDHCPVELEL 248


>gi|223039251|ref|ZP_03609541.1| exodeoxyribonuclease III [Campylobacter rectus RM3267]
 gi|222879612|gb|EEF14703.1| exodeoxyribonuclease III [Campylobacter rectus RM3267]
          Length = 256

 Score =  184 bits (466), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 69/263 (26%), Positives = 117/263 (44%), Gaps = 12/263 (4%)

Query: 4   VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA    +  AW++E  PD + LQE K  + + P E  + L ++  +   
Sbjct: 1   MKLISWNVNGLRAVAAKDGFAWLEEQKPDFLGLQEIKVRESDVPSEIYK-LGFNEISVNS 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
            +  G + +        VT       D + R +E  F      + + N+Y P+G      
Sbjct: 60  ATRAGYSGVMSLAKFASVTQKAAFFDDDEGRVLEHRFG----NVALFNIYFPNGQ-KDEA 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +   K+ +  +FL +A + ++  + +IF GD N   +  D  NP      + F    R  
Sbjct: 115 RLAYKMDFYAKFLAYAQELVKQGKDVIFCGDVNTAHREIDLKNPKANAKTSGFLPIERAW 174

Query: 183 FQKLQNMGFTDAIRA-THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             ++ + GF D  R    D    YS+W Y  ++ +KN G RID+  +S      L  A I
Sbjct: 175 LDEVVSHGFIDTFRHVRGDAVDAYSWWSYRFNARAKNVGWRIDYFFISASLKDRLKDAFI 234

Query: 242 DTKPRGWTKPSDHTPVIVSLDIP 264
            +   G    SDH PV + +D+ 
Sbjct: 235 LSDITG----SDHCPVGIEIDLD 253


>gi|158321340|ref|YP_001513847.1| exodeoxyribonuclease III Xth [Alkaliphilus oremlandii OhILAs]
 gi|158141539|gb|ABW19851.1| exodeoxyribonuclease III Xth [Alkaliphilus oremlandii OhILAs]
          Length = 252

 Score =  184 bits (466), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 67/261 (25%), Positives = 109/261 (41%), Gaps = 13/261 (4%)

Query: 5   TVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
            + +WNVN IRA +      + KE + DI C+QE+K +      E L+  + +     +K
Sbjct: 3   KLISWNVNGIRACVTKGFLDYFKEVDADIFCIQESKLQAGQIDLE-LEGYHQYWNYAEKK 61

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            Y+G AI +K +PI +   +  ++ D + R I   F                   +    
Sbjct: 62  GYSGTAIFTKEEPISVFYGIGIEEHDKEGRVITLEFGDYYMVTVYTPNSQQKLARLDYRM 121

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
                   +   R     L+ ++P+I  GD N+     D  NP     +A F+ E R  F
Sbjct: 122 ------TWEDCFRSYLNNLDKQKPIIVCGDLNVAHNEIDLKNPKSNRKNAGFSDEERAKF 175

Query: 184 QKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
            +    G+ D  R  +      Y++W Y  ++ + N G RID+  +S      L SA I 
Sbjct: 176 TEFLGNGYIDTYRYFYPDREGAYTWWSYMFNARANNAGWRIDYFCVSERLQDKLVSADIH 235

Query: 243 TKPRGWTKPSDHTPVIVSLDI 263
               G    SDH PV + ++I
Sbjct: 236 DHILG----SDHCPVELVINI 252


>gi|254447686|ref|ZP_05061152.1| exodeoxyribonuclease III [gamma proteobacterium HTCC5015]
 gi|198263029|gb|EDY87308.1| exodeoxyribonuclease III [gamma proteobacterium HTCC5015]
          Length = 256

 Score =  184 bits (466), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 70/264 (26%), Positives = 115/264 (43%), Gaps = 13/264 (4%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           +  V + NVN IRA        W++  N D++C+QETK +      E      YH     
Sbjct: 1   MYRVISVNVNGIRAAARKGFFEWMQAQNADVVCIQETKAQAHQLDDEVFHPAGYHRYLFD 60

Query: 62  --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GVA+ +K +P +++     +  D + R+IEA F      L + ++Y+  G+  
Sbjct: 61  AEKKGYSGVALYAKQKPDDVIYGFGEEGFDREGRYIEARFG----DLSVASIYVHSGSSG 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              + +        +L     + E     I  GD+NI     D  N    + ++ F  E 
Sbjct: 117 DERQQEKYRFMDF-YLPKLKAQGEDGRRYILCGDWNIAHTKADIKNWRGNQKNSGFLPEE 175

Query: 180 RQSFQK-LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R        +M + DA R      H Y++W     +W+ N G RID+ ++SP     + S
Sbjct: 176 RAWLDTLFDDMQWVDAFREIEQEEHSYTWWSNRGQAWANNTGWRIDYHIVSPNLKGTVKS 235

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
             I T+ R     SDH P+ +  D
Sbjct: 236 TDIYTQER----FSDHAPLTIDYD 255


>gi|325854960|ref|ZP_08171676.1| exodeoxyribonuclease III [Prevotella denticola CRIS 18C-A]
 gi|325483938|gb|EGC86878.1| exodeoxyribonuclease III [Prevotella denticola CRIS 18C-A]
          Length = 249

 Score =  184 bits (466), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 68/260 (26%), Positives = 114/260 (43%), Gaps = 12/260 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +  +     K  N D  CLQETK +              +     +
Sbjct: 1   MKLISWNVNGLRACVGKDFEQQFKALNADFFCLQETKMQAGQLDIS-FPGYASYWNYADK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K++P+++   +  D+ D + R I      +   + +       G      
Sbjct: 60  KGYSGTAIFTKHKPLDVTYGIGMDEHDHEGRVITLEMD-DFYLVTVYTPNSQDGLRRLDY 118

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +        ++  +    RL+ ++P++  GD N+  +  D  NP     +A FT E R+ 
Sbjct: 119 R-----MKWEKDFQDYLHRLDRKKPVVVCGDMNVAHEEIDIKNPKTNRRNAGFTDEEREK 173

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
             +L + GF D  R  +     YS+W Y   +  +N G RID+ ++S      L  A+I 
Sbjct: 174 MTQLLDSGFIDTFRTLYPEQVTYSWWSYRFRARERNTGWRIDYFLISERLRDRLEDAKIH 233

Query: 243 TKPRGWTKPSDHTPVIVSLD 262
           T+  G    SDH PV V L 
Sbjct: 234 TEIMG----SDHCPVEVDLK 249


>gi|52141752|ref|YP_085078.1| exodeoxyribonuclease III [Bacillus cereus E33L]
 gi|51975221|gb|AAU16771.1| exodeoxyribonuclease III [Bacillus cereus E33L]
          Length = 252

 Score =  184 bits (466), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 71/262 (27%), Positives = 123/262 (46%), Gaps = 14/262 (5%)

Query: 4   VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           +   +WNVN +RA         +++E+N DI CLQE K ++        +    +     
Sbjct: 1   MKFISWNVNGLRAVIAKGGFLEYLEESNADIFCLQEIKLQEGQIDLNV-EDYYTYWNYAV 59

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G AI SK +P+ +   L  ++ D + R I   F        I  LY P+      
Sbjct: 60  KKGYSGTAIFSKKEPLSVTYGLGIEEHDQEGRVITLEFEG----FYIITLYTPNAK-RGL 114

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            + D ++ W   F  +  + L+ ++P+IF GD N+  +  D  NP     +  F+ E R+
Sbjct: 115 ERLDYRMKWEDDFRAYIKR-LDEKKPVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEERE 173

Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            F  +   GF D  R  +      YS+W Y   + +KN G R+D+ ++S    + +  A+
Sbjct: 174 KFTCILEEGFIDTYRYLYPDQEGAYSWWSYRMGARAKNIGWRLDYFVVSERIKNQIKDAK 233

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I+++  G    SDH PV + ++
Sbjct: 234 INSEVMG----SDHCPVELHIN 251


>gi|325961961|ref|YP_004239867.1| exodeoxyribonuclease III [Arthrobacter phenanthrenivorans Sphe3]
 gi|323468048|gb|ADX71733.1| Exodeoxyribonuclease III [Arthrobacter phenanthrenivorans Sphe3]
          Length = 261

 Score =  184 bits (466), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 70/258 (27%), Positives = 119/258 (46%), Gaps = 8/258 (3%)

Query: 12  NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAIL 71
           NS+RAR   + AW++ ++ D++ +QETK +D NFP+E  + + Y +   G   +NGVAI 
Sbjct: 2   NSLRARADRVEAWLQRSDCDVLAIQETKCKDDNFPWELFERMGYEVAHFGVNQWNGVAIA 61

Query: 72  SKYQPIEIVTHLPGDDLD----VQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDK 127
           S+    ++                              +RI +LY+P+G  +       K
Sbjct: 62  SRVGLEDVERTFLDQPSFGKAGKDPVQEARAMAATCAGIRIWSLYVPNGRSLDDEHMPYK 121

Query: 128 ISWIKRFLRFASQRLELEEPLIF--AGDYNIIPQPHDCYNP--IIWENDACFTLEVRQSF 183
           + W++     A + +  +        GD+NI P   D ++    I       +   R +F
Sbjct: 122 LKWLESLKTHAQELVTQDPQAQVALMGDWNIAPFDEDVWDIDLFINNRSTHVSPPERAAF 181

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
              ++ GFTD +R       +Y++WDY    + K +G+RID ++ SP   + +  A ID 
Sbjct: 182 HAFESAGFTDVVRPYTPGPGVYTYWDYTQLRFPKKEGMRIDFVLASPALAARVTGASIDR 241

Query: 244 KPRGWTKPSDHTPVIVSL 261
           + R     SDH PV+V L
Sbjct: 242 EERKGKGASDHAPVVVEL 259


>gi|226228755|ref|YP_002762861.1| exodeoxyribonuclease III [Gemmatimonas aurantiaca T-27]
 gi|226091946|dbj|BAH40391.1| exodeoxyribonuclease III [Gemmatimonas aurantiaca T-27]
          Length = 265

 Score =  183 bits (465), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 70/270 (25%), Positives = 121/270 (44%), Gaps = 15/270 (5%)

Query: 4   VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + +WNVN +RA +       +I+ + PD++CLQETK+E +    + L   + +  +  
Sbjct: 1   MKIYSWNVNGLRAVLKKGLFMPFIETHQPDVLCLQETKSEREQVEID-LAGYHEYWNSAT 59

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY--------L 113
            K Y+G AI S+ +P+ +                +A     T+   I   +         
Sbjct: 60  TKGYSGTAIFSRTEPLSVTNGFAKAVAKKYTLVDDAGRDSETEGRVITAEFEKFFVVTVY 119

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
                   ++   +            + LE+++P++F GD N+     D  NP       
Sbjct: 120 TPNAKDDLSRLPLRSQHWDAAFLAHCKALEMKKPVVFCGDLNVAHTELDLANPKPNRGRK 179

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
            FT E RQ FQ   + GF D +R  H  +  YS+W ++A+S ++N G RID++++S    
Sbjct: 180 GFTDEERQGFQSFLDAGFVDTLRMFHQGNGHYSWWSHFANSRARNVGWRIDYVLVSAALQ 239

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             + +A I     G    SDH PV V+L +
Sbjct: 240 KSVATAEIHADVMG----SDHCPVSVTLSL 265


>gi|50955808|ref|YP_063096.1| exodeoxyribonuclease III [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|50952290|gb|AAT89991.1| exodeoxyribonuclease III [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 280

 Score =  183 bits (465), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 67/276 (24%), Positives = 110/276 (39%), Gaps = 9/276 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + VATWNVNSIR R+  +  W+   + D + +QE K + + FP+E  +   Y +   G  
Sbjct: 1   MRVATWNVNSIRTRVARVVDWMVREDVDALAMQEIKCKPEQFPYEAFEKAGYEVVLHGLN 60

Query: 64  SYNGVAILSKYQP------IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
            +NGVAI S+            +                       + +R+ +LY+P+G 
Sbjct: 61  QWNGVAIASRLPIDEAEIGFPDMPGFLKGHDGPGLPTEARAIGATVEGVRLWSLYVPNGR 120

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACF 175
            +    Y  K+ W+   L  A   L  +  L     GD+N+ P   D  +P +    +  
Sbjct: 121 ALDDPHYTYKLDWLAALLTNARSWLAEDPELPLALMGDWNVAPLDSDVGDPSLIPGVSTH 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
                ++            +         Y++WDY    + +N+G+RID ++ S      
Sbjct: 181 ISPPERAAFAAFEQAGLIDVVRPI-VPEGYTYWDYKQLRFPRNEGMRIDFVLGSRAFADR 239

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271
           +  A I    R    PSDH PV+V L    P     
Sbjct: 240 VVDASIHRAERKGDAPSDHVPVLVELADGRPEDADD 275


>gi|316931738|ref|YP_004106720.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris DX-1]
 gi|315599452|gb|ADU41987.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris DX-1]
          Length = 270

 Score =  183 bits (465), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 79/268 (29%), Positives = 127/268 (47%), Gaps = 8/268 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62
           +T+ TWN+NS+R RI  +A ++K   PDI+CLQETK  D  FP +  + L Y HI   GQ
Sbjct: 3   LTLTTWNINSVRLRIDLVAKFLKAQRPDILCLQETKCPDDAFPLKRFKRLGYDHIALNGQ 62

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT-- 120
           K Y+GVA++SK            D +D +   +      +   L + N Y+P G  I   
Sbjct: 63  KGYHGVAVISKLPFAATDIRTFCDIIDSRHISVSVKTADDAPPLVLHNFYVPAGGDIPDP 122

Query: 121 --STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL- 177
             + K+  K+S++             ++  I  GD N+ P  HD ++          T  
Sbjct: 123 AVNPKFKHKLSFLDEMKACEPLHPAGDQRHILVGDLNVAPHEHDVWSHKQLLKVVSHTPV 182

Query: 178 EVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSL 235
           E  +    L+   + D  R        +Y++W Y A  W+  ++G R+DHI +S      
Sbjct: 183 ECEKLLAVLRAGNWVDVARERIPLDQKVYTWWSYRAADWTVGDRGRRLDHIWVSEALKDR 242

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +   +I    R W +PSDH PV +++++
Sbjct: 243 VTDFKILRDARSWDRPSDHVPVTMTMEL 270


>gi|323490286|ref|ZP_08095501.1| exodeoxyribonuclease III [Planococcus donghaensis MPA1U2]
 gi|323395956|gb|EGA88787.1| exodeoxyribonuclease III [Planococcus donghaensis MPA1U2]
          Length = 251

 Score =  183 bits (465), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 66/261 (25%), Positives = 113/261 (43%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      +  E N D+ CLQE K ++     + L     +     +
Sbjct: 1   MKLISWNVNGLRAVMKKGFMDFFTEVNADVFCLQEIKLQEGQIEMD-LPGYYTYWNYAHK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +P+ +   L  ++LD + R I   F      + +      HG      
Sbjct: 60  KGYSGTAIFTKQKPVAVQYGLGLEELDTEGRIITLEFDSY-YVITVYTPNSQHGLLRLDY 118

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +        +  +    + L+  +P++  GD N+  +  D  NP   + ++ FT E R  
Sbjct: 119 RL-----LWEEAILSFVKTLDNHKPVLLCGDLNVAHEEIDLKNPKANKKNSGFTPEERSK 173

Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             +    GF D  R  +      YS+W Y ++   KN G RID+ + S      L +A+I
Sbjct: 174 MTQFLESGFVDTFRYFYPEEEGHYSWWSYRSNCREKNVGWRIDYFLASQRLVPELQNAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
                G    SDH PV + ++
Sbjct: 234 HKDIWG----SDHCPVELQIE 250


>gi|319790081|ref|YP_004151714.1| exodeoxyribonuclease III Xth [Thermovibrio ammonificans HB-1]
 gi|317114583|gb|ADU97073.1| exodeoxyribonuclease III Xth [Thermovibrio ammonificans HB-1]
          Length = 259

 Score =  183 bits (465), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 79/264 (29%), Positives = 136/264 (51%), Gaps = 9/264 (3%)

Query: 4   VT-VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +  + TWNVNS+RAR+  ++ W++    D + LQETK  D+ FP    + L Y +   GQ
Sbjct: 1   MRSLVTWNVNSVRARLSYISYWLERERWDFLALQETKVPDELFPEGVFKELGYGVVYHGQ 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K+YNGVA+  K +P+ ++   P  + D +        T+  +   I N+Y+P G    S 
Sbjct: 61  KAYNGVALCFKGEPLRVLKGWPDGEDDEKRLI-----TVWLEPFPIVNVYVPRGGEKGSE 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           ++  K+ ++ +   F  +    +EPL   GD+N+     D Y+P +W     F  + RQ+
Sbjct: 116 RHAFKLYFLTKLKLFLQESFSPDEPLAVVGDFNVARSELDVYDPAVWRGRPGFMEDERQA 175

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F++L + G  D  R  H     Y++WD     +++N+G+RID+I+++          R+ 
Sbjct: 176 FEELLSFGLFDLFRELHPDEPGYTWWDIETGGFARNRGLRIDYILVTEPLLKRAQECRVL 235

Query: 243 TKPR---GWTKPSDHTPVIVSLDI 263
            + R   G   PSDH P++ +  I
Sbjct: 236 REARRKLGGLLPSDHAPLVAAFRI 259


>gi|294674336|ref|YP_003574952.1| exodeoxyribonuclease III [Prevotella ruminicola 23]
 gi|294473057|gb|ADE82446.1| exodeoxyribonuclease III [Prevotella ruminicola 23]
          Length = 249

 Score =  183 bits (465), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 71/260 (27%), Positives = 115/260 (44%), Gaps = 12/260 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA      +   +E + D  CLQETK +         +    +     +
Sbjct: 1   MKLISWNVNGLRACEGKGFSDTFRELDADFFCLQETKMQAGQLDL-AFEGYESYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K+ P+ +   +  D+ D + R I                     +     
Sbjct: 60  KGYSGTAIFTKHHPLSVTYGIGIDEHDHEGRVITLEMEDFYL-----VTCYTPNSQDGLK 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           + D +++W   F  +    L+ ++P+I  GD N+  Q  D  NP     +A FT + R+ 
Sbjct: 115 RLDYRMTWENDFRAYLKG-LDAKKPVILCGDLNVAHQEIDLKNPKTNRMNAGFTDQEREQ 173

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F  L   GFTD+ R  +     YS+W Y   +  KN G RID+ ++S      +  ARI 
Sbjct: 174 FSTLLASGFTDSFRYKYPEQVTYSWWSYRFQARQKNAGWRIDYFVISDRLRERMDDARIH 233

Query: 243 TKPRGWTKPSDHTPVIVSLD 262
           T+  G    SDH PV ++L 
Sbjct: 234 TQILG----SDHCPVELTLK 249


>gi|229157316|ref|ZP_04285394.1| Exodeoxyribonuclease [Bacillus cereus ATCC 4342]
 gi|228626043|gb|EEK82792.1| Exodeoxyribonuclease [Bacillus cereus ATCC 4342]
          Length = 252

 Score =  183 bits (465), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 72/262 (27%), Positives = 124/262 (47%), Gaps = 14/262 (5%)

Query: 4   VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + +WNVN +RA         +++E+N DI CLQE K +D       L+    +     
Sbjct: 1   MKLISWNVNGLRAVIAKGGFLEYLEESNADIFCLQEIKLQDGQIDLN-LEEYYTYWNYAV 59

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G AI SK +P+ +   L  ++ D + R I   F        I  LY P+ +    
Sbjct: 60  KKGYSGTAIFSKKEPLSVTYGLGIEEHDQEGRVITLEFE----DFYIITLYTPN-SKRGL 114

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            + D ++ W   F  +  + L+ ++P++F GD N+  +  D  NP     +  F+ E R+
Sbjct: 115 ERLDYRMKWEDDFRVYIKR-LDEKKPVVFCGDLNVAHKEIDLKNPKSNRKNPGFSDEERE 173

Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            F  +   GF D  R  +      YS+W Y   +  KN G R+D+ ++S      +  A+
Sbjct: 174 KFTCILEEGFIDTYRYLYPNQEGAYSWWSYRMGARVKNIGWRLDYFVVSERMKDQITEAK 233

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I+++  G    SDH PV + ++
Sbjct: 234 INSEVMG----SDHCPVELHIN 251


>gi|299133181|ref|ZP_07026376.1| exodeoxyribonuclease III Xth [Afipia sp. 1NLS2]
 gi|298593318|gb|EFI53518.1| exodeoxyribonuclease III Xth [Afipia sp. 1NLS2]
          Length = 271

 Score =  183 bits (465), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 87/268 (32%), Positives = 125/268 (46%), Gaps = 9/268 (3%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQK 63
           T+ TWN+NS+R RI  +A ++K   PD++CLQETK  D  FP +  Q L Y HI   GQK
Sbjct: 4   TLTTWNINSVRLRIDLVAKFLKSRRPDVLCLQETKCIDDAFPLKRFQRLGYEHIALNGQK 63

Query: 64  SYNGVAILSKYQPI-EIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT-- 120
            Y+GVAI+SK   + + V    G                 +  L + N Y+P G  I   
Sbjct: 64  GYHGVAIVSKRPFVSKDVRTFCGKIDSRHISVAFGESAGLSAPLVLHNFYVPAGGDIPDP 123

Query: 121 --STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL- 177
             + K++ K+S++      A    + +   I  GD N+ P  HD ++     N    T  
Sbjct: 124 AANPKFEHKLSFLDEMRDCAPLHPQGDARHILVGDLNVAPHEHDVWSHKQLLNVVSHTPV 183

Query: 178 EVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSL 235
           E  +         + D  R        +Y++W Y A  W+  N+G R+DHI +SP     
Sbjct: 184 ECEKLLAVQSQGNWVDIARQRIPMDEKVYTWWSYRAADWTVGNRGRRLDHIWVSPALGDK 243

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +   RI    R W +PSDH PV   LDI
Sbjct: 244 VSDFRITRDARSWERPSDHVPVTAVLDI 271


>gi|91216089|ref|ZP_01253057.1| exodeoxyribonuclease [Psychroflexus torquis ATCC 700755]
 gi|91185606|gb|EAS71981.1| exodeoxyribonuclease [Psychroflexus torquis ATCC 700755]
          Length = 260

 Score =  183 bits (465), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 71/264 (26%), Positives = 129/264 (48%), Gaps = 15/264 (5%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY---HIET 59
           + + ++NVN IRA +   L  W+K  + D++C QETK + +       +++ Y   +  +
Sbjct: 7   MKIVSYNVNGIRAALKKGLIDWLKTTDADVVCFQETKAQPEQIDNSIFENIGYNNCYWYS 66

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+ V IL K +P  +      D +D + R +   F      + I +LYLP G   
Sbjct: 67  AEKKGYSSVGILCKSEPKHVEYGTGIDYMDREGRNLRVDFE----DVSIMSLYLPSG--T 120

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-E 178
              + + K +++  F  +     +   PL+  GDYNI  +  D ++P+  +  + F   E
Sbjct: 121 NDARLNYKFTYMDDFKVYIENLKKEIPPLVICGDYNICHEAIDIHDPVRLKTVSGFLPAE 180

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
                + L++ GF D+ R  ++    YS+W Y A++   NKG R+D+++++ E   L+  
Sbjct: 181 REWLSKFLKDSGFVDSFRKLNEDVVHYSWWSYRANARQNNKGWRLDYLLVAQEIEDLVFR 240

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
           + I        K SDH PV++ L 
Sbjct: 241 SVILPDA----KHSDHCPVLLELK 260


>gi|134297280|ref|YP_001121015.1| exodeoxyribonuclease III Xth [Burkholderia vietnamiensis G4]
 gi|134140437|gb|ABO56180.1| exodeoxyribonuclease III Xth [Burkholderia vietnamiensis G4]
          Length = 257

 Score =  183 bits (465), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 62/264 (23%), Positives = 112/264 (42%), Gaps = 14/264 (5%)

Query: 3   VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59
           ++ V T N+N IR A       W+ E N D +C+QE K    + P E ++   +  +   
Sbjct: 1   MMRVITANLNGIRSAAKKGFFDWLGEQNADCVCVQEIKVSADDLPAEFVEPHGFKSYFHH 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G  + S+ +P +++      + D + R++EA +      L + ++Y+P G+  
Sbjct: 61  AAKKGYSGAGVYSRREPDDVIIGFGSSEFDPEGRYVEARYG----KLSVVSVYVPSGSSG 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +                  L+ +  +I  GD NI+ +  D  N    + ++    E 
Sbjct: 117 EERQQA--KYRFMDEFMPHLAELKQQREVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEE 174

Query: 180 RQSFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R    +L +  G+ D  R        Y++W     +++KN G RID+ + +P       S
Sbjct: 175 RAWLTQLFDEVGYVDVFRTLDPRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGVAGTAKS 234

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
             I        K SDH P+ V  D
Sbjct: 235 TSIFKDI----KFSDHAPLTVDYD 254


>gi|260909404|ref|ZP_05916112.1| exodeoxyribonuclease III [Prevotella sp. oral taxon 472 str. F0295]
 gi|260636496|gb|EEX54478.1| exodeoxyribonuclease III [Prevotella sp. oral taxon 472 str. F0295]
          Length = 249

 Score =  183 bits (465), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 67/260 (25%), Positives = 104/260 (40%), Gaps = 12/260 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +  +     K  + D  CLQETK +      +             +
Sbjct: 1   MKFISWNVNGLRAVVGKDFENIFKSLDADFFCLQETKMQAGQLDLQ-FDGYESFWNYADK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI ++++P+ +   +  D  D + R I                       +   
Sbjct: 60  KGYSGTAIYTRHKPLNVTYGIGIDQHDHEGRVITLEMPTFFLVTVYTPNSQDELRRLDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +   +     L+  +P+I  GD N+  Q  D  NP     +A FT E RQ 
Sbjct: 120 MQ------WEDDFQAYLHDLDKRKPVIVCGDMNVAHQEIDLKNPKTNRRNAGFTDEERQK 173

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
             +L   GFTD  R  +     YS+W Y   +  +N G RID+ ++S    S +  A+I 
Sbjct: 174 MTQLLGAGFTDTFRWKYPEEITYSWWSYRFKARERNTGWRIDYFLVSDRLQSEVLDAKIH 233

Query: 243 TKPRGWTKPSDHTPVIVSLD 262
           T   G    SDH PV + L 
Sbjct: 234 TDILG----SDHCPVELELK 249


>gi|194364073|ref|YP_002026683.1| exodeoxyribonuclease III Xth [Stenotrophomonas maltophilia R551-3]
 gi|194346877|gb|ACF50000.1| exodeoxyribonuclease III Xth [Stenotrophomonas maltophilia R551-3]
          Length = 266

 Score =  183 bits (465), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 66/275 (24%), Positives = 112/275 (40%), Gaps = 24/275 (8%)

Query: 4   VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + ++N N IR A       W +  + D++C+QETK ++        +   +H      
Sbjct: 1   MRIISFNANGIRSAATKGFLDWFRAQDADVLCIQETKAQEDQLTDPMFRPDGHHCFYRDA 60

Query: 62  --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GVAI SK +P +++T L     D + R+IEA +      L + + Y+P G+  
Sbjct: 61  ITKKGYSGVAIYSKREPDQVITSLGWAPFDDEGRYIEARYG----NLSVVSFYIPSGS-S 115

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +   K   ++       +        +  GD+NI+    D  N    + ++    E 
Sbjct: 116 GDLRQGFKFEVMEWLRPILEEWARSGRDYVLCGDWNIVRSALDIKNWKSNQKNSGCLPEE 175

Query: 180 RQSFQKLQNMG-----------FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
           R     L               + DA R  + T   Y++W     + + N G RID+  +
Sbjct: 176 RDWLNALCADHGQATDVATGRGWADAYRLLNPTGEDYTWWSNRGAARANNVGWRIDYQFI 235

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +P     L S  I    R     SDH P IV  D+
Sbjct: 236 TPGLRDRLRSCSIYRDER----FSDHAPFIVDYDL 266


>gi|134103032|ref|YP_001108693.1| AP endonuclease [Saccharopolyspora erythraea NRRL 2338]
 gi|291005211|ref|ZP_06563184.1| AP endonuclease [Saccharopolyspora erythraea NRRL 2338]
 gi|133915655|emb|CAM05768.1| AP endonuclease, family 1:exodeoxyribonuclease III xth
           [Saccharopolyspora erythraea NRRL 2338]
          Length = 265

 Score =  183 bits (465), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 62/265 (23%), Positives = 104/265 (39%), Gaps = 6/265 (2%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IET 59
           ++TV+T NVN +RA        W+     D++C+QET+ E    P        +H  +  
Sbjct: 1   MLTVSTVNVNGLRAAAKKGFVEWLAATGSDVVCMQETRAEPDQLPAAVRSPEGWHTQLAP 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
              K  +GVAI S+ +P E+       + D   R++EATF        +       G P 
Sbjct: 61  SADKGRSGVAIYSRREPDEVRVGFGSAEFDESGRYVEATFGDVVVA-SLYLPSGDVGTPR 119

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K      ++       ++     +  +  GD+NI  +  D  N    +  A F  E 
Sbjct: 120 QDEKERFMKEFLVHLTDLRARAEAAGKQALVCGDWNIAHREIDLKNWKGNQKSAGFLPEE 179

Query: 180 RQSFQKLQNM--GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
           R    ++ +         R   +    YS+W Y   ++  + G RID++  +P       
Sbjct: 180 RAWLTQVFDEVGYVDVVRRLHPEGPGPYSWWSYRGKAFDNDSGWRIDYLAATPALAERCT 239

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLD 262
            A ++  P    + SDH PV    D
Sbjct: 240 DAFVERAPSYDKRWSDHAPVTAVFD 264


>gi|289524110|ref|ZP_06440964.1| exodeoxyribonuclease III [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289502766|gb|EFD23930.1| exodeoxyribonuclease III [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 261

 Score =  183 bits (465), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 87/264 (32%), Positives = 131/264 (49%), Gaps = 4/264 (1%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           M   T++T+N NS+R+R+  L  W+ +N  D++CLQETK  D  FP     S  YH+   
Sbjct: 1   MPFFTISTFNANSVRSRLQILERWLIKNPVDVLCLQETKVSDDQFPASAFDSWGYHVFFR 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           G+K+Y GVAI  + +P EI+            +  +         L + N Y+P G  I 
Sbjct: 61  GRKAYAGVAIACQGEPNEIIYG---FPDGKDGKDDDRLMMARFDDLWVINTYVPQGKSID 117

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
              Y  K  + +RFL       + ++ +I+ GD N+ P+  D   P    N  CF  E+R
Sbjct: 118 HPDYRYKKDFFRRFLDLLESEFKADDKIIWVGDMNVAPEEKDVTKPETKRNHVCFHEEIR 177

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYY-ADSWSKNKGIRIDHIMLSPEATSLLHSA 239
             F  +++ GF D  R  H     Y+FWDY   ++  +N G R+DHI+ +P         
Sbjct: 178 DIFDTVKSWGFVDVFRKHHPEEGQYTFWDYRVKNALERNIGWRVDHILATPSVADRSVDC 237

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
            ID +PR W KPSDHT ++   D+
Sbjct: 238 YIDREPRSWEKPSDHTFLVGIFDL 261


>gi|269216697|ref|ZP_06160551.1| exodeoxyribonuclease III [Slackia exigua ATCC 700122]
 gi|269129931|gb|EEZ61014.1| exodeoxyribonuclease III [Slackia exigua ATCC 700122]
          Length = 264

 Score =  183 bits (465), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 68/269 (25%), Positives = 109/269 (40%), Gaps = 14/269 (5%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +           + D+  LQETK ++     + L     +     +
Sbjct: 1   MRLISWNVNGLRAVVKKGFNEAFAALDADVFALQETKLQEGQIELD-LPGYVQNWSYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITS 121
           K Y+G A+ S+ +P+++V H+    LD + R     F       +   N           
Sbjct: 60  KGYSGTAVFSREEPLQVVHHVGTPALDTEGRICACEFEKFWFVDVYTPNAQPELARLEHR 119

Query: 122 TKYDDKISWIKRFLRFASQRLELEE------PLIFAGDYNIIPQPHDCYNPIIWENDACF 175
             +D       + L        L        P+I  GD+N+  Q  D  NP     +  F
Sbjct: 120 MAWDAAFREFCKNLEAGVVPEGLGYASAEPKPVIMCGDFNVAHQEIDLKNPRSNRGNPGF 179

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
           + E R SF  L + GF D  R  H      YS+W Y  ++   N G RID+ ++S     
Sbjct: 180 SDEERSSFTSLLDAGFADTFRMLHPDLEGAYSWWSYRFNARKNNAGWRIDYFLVSDALRG 239

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            + SA I  +  G    SDH PV + + +
Sbjct: 240 AIESASIYDEVMG----SDHCPVGLDIAL 264


>gi|262341194|ref|YP_003284049.1| exodeoxyribonuclease [Blattabacterium sp. (Blattella germanica)
           str. Bge]
 gi|262272531|gb|ACY40439.1| exodeoxyribonuclease [Blattabacterium sp. (Blattella germanica)
           str. Bge]
          Length = 253

 Score =  183 bits (465), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 79/261 (30%), Positives = 127/261 (48%), Gaps = 12/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60
           + + ++N+N IR+ I   L+ WI+ +NPDI+CLQE K   +         L Y  +  + 
Sbjct: 1   MKIISYNINGIRSGINKGLSDWIESSNPDILCLQEIKAFPEQIDTNIFDQLGYNHYWFSS 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GV IL K +PI +   +    +D + R +          L I +LYLP GN + 
Sbjct: 61  EKKGYSGVGILCKEKPIHVEYGIGLSSIDQEGRVLRIDMK----NLSIISLYLPSGNNMK 116

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
               + K  ++K F     +       LI  GDYNI     D Y+P+  +  + F  E R
Sbjct: 117 KR-LNFKFFFMKNFFSHVKKIRNQFNHLIICGDYNICHHEIDIYDPMKHQEISGFLPEER 175

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           +      N+GF D+ R      H YS+W Y +++   NKG RID++M+S      + +A 
Sbjct: 176 EWMTHFLNLGFVDSFRNCVQEAHHYSWWSYRSNARKNNKGWRIDYVMVSSSLKEKIRNAY 235

Query: 241 IDTKPRGWTKPSDHTPVIVSL 261
           + +      K SDH PV++ +
Sbjct: 236 LLSDV----KLSDHCPVVLEI 252


>gi|299141239|ref|ZP_07034376.1| exodeoxyribonuclease III [Prevotella oris C735]
 gi|298577199|gb|EFI49068.1| exodeoxyribonuclease III [Prevotella oris C735]
          Length = 250

 Score =  183 bits (465), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 69/261 (26%), Positives = 111/261 (42%), Gaps = 12/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +  + +   +  N D  CLQETK +      +       +     +
Sbjct: 1   MKFISWNVNGLRACVGKDFSQSFETLNADFFCLQETKMQAGQLDLQ-FPGYTSYWNYADK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI ++ +PI +   +  D+ D + R I   +                   +   
Sbjct: 60  KGYSGTAIYARKEPIAVTYGIGIDEHDHEGRVITLEYDNFFLVTVYTPNAQDGLRRLDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +   +    RL+ ++P+I  GD N+  Q  D  NP     +A FT E R+ 
Sbjct: 120 M------TWEDDFQAYLHRLDEQKPVIVCGDLNVAHQEIDLKNPKSNRRNAGFTDEEREK 173

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
             +L + GFTD  R  +     YS+W Y   +  KN G RID+ ++S      L  A I 
Sbjct: 174 MTQLLSHGFTDTFRTLYPEQVTYSWWSYRFRAREKNAGWRIDYFLISDRLRPQLKDASIH 233

Query: 243 TKPRGWTKPSDHTPVIVSLDI 263
           T+  G    SDH P+ V L++
Sbjct: 234 TEIFG----SDHCPIEVDLEL 250


>gi|188997510|ref|YP_001931761.1| exodeoxyribonuclease III Xth [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188932577|gb|ACD67207.1| exodeoxyribonuclease III Xth [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 264

 Score =  183 bits (464), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 80/265 (30%), Positives = 126/265 (47%), Gaps = 6/265 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWI--KENNPDIICLQETKTEDKNFPFETLQSLNY-HIETC 60
           + + T+NVNSI+AR   +  W+  + N+ D++C QE K EDKNFP E  + L Y + +  
Sbjct: 1   MKICTFNVNSIKARKDLVIEWLNHRNNDIDVLCFQEIKVEDKNFPSEDFKKLGYVYQDIS 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           GQK YNGVA LSK +       L  +  DVQ R +     I  +   I            
Sbjct: 61  GQKGYNGVATLSKLEISHYQKGLNHEYFDVQKRVLI-DKIIEKEIFVINTYAPHGDLRGG 119

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
              Y     +               + ++  GD NI  +  D Y+P++  +      E R
Sbjct: 120 EKYYYKLDWYKHFINFLKENFDFENQKIMLLGDLNIALEDIDVYDPVLLTDSIGTMPEER 179

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           +  ++L N+G  D  R  +     +++WDY   +  +N+G+RID+I++S      + +  
Sbjct: 180 ELLRQLLNLGLIDTFRYLYPNKQQFTWWDYIGGAIWRNEGMRIDYILVSKPFLQYVKNVE 239

Query: 241 IDTKPRGW--TKPSDHTPVIVSLDI 263
           +D  PR     KPSDH PVI+ L+I
Sbjct: 240 VDLWPRRRRSPKPSDHAPVILDLEI 264


>gi|260464219|ref|ZP_05812412.1| exodeoxyribonuclease III Xth [Mesorhizobium opportunistum WSM2075]
 gi|259030022|gb|EEW31305.1| exodeoxyribonuclease III Xth [Mesorhizobium opportunistum WSM2075]
          Length = 289

 Score =  183 bits (464), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 77/266 (28%), Positives = 117/266 (43%), Gaps = 9/266 (3%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64
           +ATWN+NS+R R+  +   + E  PD++CLQETK  D+ FP +  + L Y HI   GQK 
Sbjct: 26  IATWNINSVRLRMPIVERLLVEQAPDVLCLQETKVPDELFPEKAFRKLGYEHIAFHGQKG 85

Query: 65  YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124
           Y+GVA +++     +      +     +R +  T     +T+ + N Y+P G        
Sbjct: 86  YHGVATVARRPIAVVEKRRFCE--IEDSRHLSVTVRAGGKTILVHNFYVPAGGDEPDPVI 143

Query: 125 DDKISWIKRFLRFASQRLELEEPLI---FAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180
           + K      F+   +      + +      GD NI P  HD ++     N    T  E  
Sbjct: 144 NKKFKHKLDFVAEMNAIRAEHDEVSASVLVGDLNIAPLEHDVWSHKQLLNVVSHTPVETE 203

Query: 181 QSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHS 238
                     + D +R    +   LY++W Y A  W   N+G R+DH+  SP        
Sbjct: 204 NFEAMRLAGNWIDLMRLNVPSEQKLYTWWSYRAQDWEASNRGRRLDHVWSSPNLVPSFTG 263

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIP 264
             I    RGW +PSDH PVI   D+ 
Sbjct: 264 YEILRLARGWERPSDHVPVIARFDLD 289


>gi|238922913|ref|YP_002936426.1| exodeoxyribonuclease [Eubacterium rectale ATCC 33656]
 gi|238874585|gb|ACR74292.1| exodeoxyribonuclease [Eubacterium rectale ATCC 33656]
          Length = 251

 Score =  183 bits (464), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 66/261 (25%), Positives = 111/261 (42%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +      +    + D  C+QE+K +      + L   + +     +
Sbjct: 1   MKFISWNVNGLRACVQKGFLDFFNSIDADFFCIQESKLQAGQIDLD-LPGYHQYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +P+ +   +  ++ D + R I   +        +   Y P+       
Sbjct: 60  KGYSGTAIFAKNEPLSVSYGIGIEEHDKEGRVITLEYD----NFYLVTCYTPNSQNELKR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
               ++ W   F  +    L+ ++P++  GD N+     D  NP     +A F+ E R  
Sbjct: 116 -LPYRMQWEDDFREYLKT-LDAKKPVVLCGDLNVAHNEIDLKNPKTNRKNAGFSDEERAK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             +L   GFTD  R  +     +YS+W Y   +  KN G RID+ + S      L  A I
Sbjct: 174 MTELLGSGFTDTFRYFYPDAEGIYSWWSYRFKAREKNAGWRIDYFITSKRINDKLKKAAI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            T   G    SDH PV V ++
Sbjct: 234 HTDVLG----SDHCPVEVDIE 250


>gi|111115360|ref|YP_709978.1| exodeoxyribonuclease III [Borrelia afzelii PKo]
 gi|216263647|ref|ZP_03435642.1| exodeoxyribonuclease III [Borrelia afzelii ACA-1]
 gi|110890634|gb|ABH01802.1| exodeoxyribonuclease III [Borrelia afzelii PKo]
 gi|215980491|gb|EEC21312.1| exodeoxyribonuclease III [Borrelia afzelii ACA-1]
          Length = 255

 Score =  183 bits (464), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 61/260 (23%), Positives = 104/260 (40%), Gaps = 12/260 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCG 61
           + + +WNVN IRA +      +++E  PDI+C+QETK   +  P + +    Y +     
Sbjct: 1   MKLISWNVNGIRAVLKKGFLEFVREYTPDILCVQETKALKEQLPRDLILENYYSYFSKSK 60

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
            K Y+GV I SK +PI +        L  +    E    I      +        +    
Sbjct: 61  IKGYSGVCIYSKVKPIAVN------LLGKEIFDNEGRGLIAHYEDFVLINGYFPNSQALR 114

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            +   K+ ++          +   + +I  GD+NI     D  +P    +   + +E   
Sbjct: 115 RRLVYKLDFLSYVENLIDSFVNDGKNIIICGDFNIAHTEIDLISPDSNRDSPGYYIEETT 174

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
                 N G+ D  R  +     Y++W Y   +  KN G RID+ +++      +  + I
Sbjct: 175 WLDSFLNKGYVDTFRIFNKEPGYYTWWSYRTRAREKNIGWRIDYFIVNEFFKRNVKKSLI 234

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
             K  G    SDH PV + L
Sbjct: 235 LDKVMG----SDHCPVFLEL 250


>gi|307693148|ref|ZP_07635385.1| exodeoxyribonuclease [Ruminococcaceae bacterium D16]
          Length = 252

 Score =  183 bits (464), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 72/262 (27%), Positives = 123/262 (46%), Gaps = 12/262 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      + +E  PD  CLQETK E      +  +++  +  +  +
Sbjct: 1   MKLISWNVNGLRACLKKGFLDFYQEQKPDFCCLQETKMEQGQADVDLGENMLEYWNSAEK 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G A+ + +QP+ +   +  ++ D + R I   +       +   +     N  +  
Sbjct: 61  KGYSGTAVFTPHQPLAVRYGMGKEEHDHEGRLITLEYE------KFYLVCCYTPNSQSEL 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           K  D     +  LR     L+  +P+I+ GD N+  +  D  NP     +A FT + R+ 
Sbjct: 115 KRLDYRMEWEDDLRAYLMELDKVKPVIYCGDLNVAHREIDLKNPKTNRMNAGFTDQEREK 174

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
              L + GFTD  R  +     +YS+W Y   +  KN G RID+ ++S    + +  A I
Sbjct: 175 MTTLLSSGFTDTFRFLYPDLEGVYSWWSYRFQARKKNAGWRIDYFIVSDRLQNAIKRAEI 234

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
            T+  G    SDH PV++ LDI
Sbjct: 235 LTQVEG----SDHCPVLLELDI 252


>gi|316933480|ref|YP_004108462.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris DX-1]
 gi|315601194|gb|ADU43729.1| exodeoxyribonuclease III Xth [Rhodopseudomonas palustris DX-1]
          Length = 256

 Score =  183 bits (464), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 91/259 (35%), Positives = 139/259 (53%), Gaps = 3/259 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+NVN++  R+  L AW+K   P+I+CLQE K  D +FP   L+   Y     GQK
Sbjct: 1   MKIATFNVNNVNKRLPVLLAWLKAARPEIVCLQELKAADADFPEAALRRAGYTAAWAGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           S+NGVAIL++ + I +           +              + +G LY P+GNP    K
Sbjct: 61  SWNGVAILARRREIVVTRRRLPGAPHDKQS---RYIEAAVAGIIVGCLYAPNGNPQPGPK 117

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +D+K++W+KR  R A+  L+   P++ AGD+N++P P D Y    W+ DA      R+ F
Sbjct: 118 FDEKLAWLKRLNRHAATLLKSGAPVVLAGDFNVVPTPADIYPTKSWDKDALVQPAPRKLF 177

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             L   G+TDA+R  H     Y+FW Y+   + ++ G+RIDH++L P     L  A +D 
Sbjct: 178 AALLRQGWTDALRHCHPDDAPYTFWSYWRKRFERDAGLRIDHLLLDPSLALRLKRAGVDR 237

Query: 244 KPRGWTKPSDHTPVIVSLD 262
           K R   + SDH P  + +D
Sbjct: 238 KVRAAPEASDHAPAWIMID 256


>gi|331694970|ref|YP_004331209.1| exodeoxyribonuclease III Xth [Pseudonocardia dioxanivorans CB1190]
 gi|326949659|gb|AEA23356.1| exodeoxyribonuclease III Xth [Pseudonocardia dioxanivorans CB1190]
          Length = 289

 Score =  183 bits (464), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 78/267 (29%), Positives = 134/267 (50%), Gaps = 7/267 (2%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFP---FETLQSLNYHI 57
           M +V +ATWNVNS + R+  L  W+ +  PD++CLQETK  D ++     + ++   Y +
Sbjct: 1   MRLVRLATWNVNSAKTRLPRLLPWLDQRAPDVVCLQETKLADADWAETFDDAMRERGYEV 60

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT--LRIGNLYLPH 115
              GQ  +NGVA+LS+    ++   LP +              +      LR+ ++Y+P+
Sbjct: 61  AHYGQGRWNGVALLSRVGLDDVERGLPAEPRFPDDDSAPEARALTATCGGLRVTSVYVPN 120

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
           G       Y  K+ W+       +         + AGD NI P   D ++P ++ +    
Sbjct: 121 GRTPDDPHYAYKLRWLDALQAMVADG--PTATSVVAGDMNIAPTDADVWDPSLFVDSTHV 178

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
           T   R++ + L  +G  D +R       ++S+WDY A  + ++KG+RID +++  +A   
Sbjct: 179 TPAERKALEALTGLGLHDVVRDRWPGQRVFSYWDYRAGRFHQDKGMRIDLVLVGDDAVGR 238

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262
           + +A ID + R  + PSDH PV+V LD
Sbjct: 239 VQAAWIDRQARKGSGPSDHAPVMVDLD 265


>gi|329768092|ref|ZP_08259601.1| exodeoxyribonuclease III [Gemella haemolysans M341]
 gi|328838247|gb|EGF87859.1| exodeoxyribonuclease III [Gemella haemolysans M341]
          Length = 254

 Score =  183 bits (464), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 68/261 (26%), Positives = 112/261 (42%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   ++NVN +RA +  N     K+ + D  CLQETK +      +       +     +
Sbjct: 1   MKCISFNVNGLRAIVGKNFEEDFKKLDADFFCLQETKMQAGQLDLQ-FNGYYSYFNYAER 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K++PI +   +  ++ D + R I   +    +   I       G+ +   
Sbjct: 60  KGYSGTAIYTKHEPINVTYGIGIEEHDTEGRVITLEY---DKFFFITVYTPNSGSELKRL 116

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +Y       +   +     L   + ++  GD N+     D  NP     +A FT E R+ 
Sbjct: 117 EYR---MSWEEDFKNYLLELNKTKGIVVCGDLNVAHTEIDLKNPKSNTKNAGFTQEEREK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F KL + GF D  R  +      YS+W Y  ++   N G RID+ ++S +    L SA I
Sbjct: 174 FTKLLDAGFIDTFRYYNPDLTGAYSWWSYRFNARKNNAGWRIDYFLVSRDLEKYLESAAI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
             +  G    SDH PV + L 
Sbjct: 234 HNEIFG----SDHCPVELVLK 250


>gi|307823885|ref|ZP_07654113.1| exodeoxyribonuclease III Xth [Methylobacter tundripaludum SV96]
 gi|307735179|gb|EFO06028.1| exodeoxyribonuclease III Xth [Methylobacter tundripaludum SV96]
          Length = 254

 Score =  183 bits (464), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 66/263 (25%), Positives = 111/263 (42%), Gaps = 14/263 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + +WNVN +RA      A  +   + D I LQETK +             Y + +   
Sbjct: 1   MKIISWNVNGVRAVQSKGFAETLALLDADCILLQETKAQADQIDKALEGIDGYRVYSNCA 60

Query: 62  -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GV ILS+ +P+++++ +   + D + R I A F        +       G  + 
Sbjct: 61  ERKGYSGVTILSRKEPLQVISDIGIVEHDREGRVIVAEFE---NFFLLNVYVPNSGEALA 117

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND-ACFTLEV 179
              Y               ++L+ ++PLI  GD+N+  Q  D   P    N  A +T   
Sbjct: 118 RLDYRQTWDIEF---LAYCRQLQKKKPLIACGDFNVAHQEIDIARPKPNYNKSAGYTQVE 174

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
              F +  + G  D  R  H     YS+W +   + ++N G RID+++ S      +  A
Sbjct: 175 IDGFSRFLDAGLVDTFRHFHPDTVAYSWWSFRGGARARNVGWRIDYVLTSKTLAGNVKQA 234

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
            I  +  G    SDH PV + +D
Sbjct: 235 FILPEISG----SDHCPVGIEID 253


>gi|240140848|ref|YP_002965328.1| Exodeoxyribonuclease III (Exonuclease III) (EXO III) (AP
           endonuclease VI) [Methylobacterium extorquens AM1]
 gi|240010825|gb|ACS42051.1| Exodeoxyribonuclease III (Exonuclease III) (EXO III) (AP
           endonuclease VI) [Methylobacterium extorquens AM1]
          Length = 269

 Score =  183 bits (464), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 75/267 (28%), Positives = 126/267 (47%), Gaps = 7/267 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62
           +TV TWN+NS+R RI ++  +++E  PD++CLQETK  D  FP +  +   Y +I   GQ
Sbjct: 3   LTVTTWNINSVRLRIESVLRFLREAQPDVLCLQETKCPDDLFPLKAFKGSGYENIVFAGQ 62

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLD-VQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           K YNGVAI+S++  +        +  D      +          + + + Y+P G  +  
Sbjct: 63  KGYNGVAIISRFPLLTRDVMSFCERPDARHISAVLGPEAGPAAGIVLHDFYVPAGGDMPH 122

Query: 122 TKYDDKISWIKRFLRFASQR--LELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              + K +    FL          +  P I  GD N+ P  HD ++     +    T   
Sbjct: 123 RDLNPKFAHKLDFLSELRVWGGRRVSGPAILVGDLNVAPLEHDVWSHKQLLDVVSHTPVE 182

Query: 180 RQS--FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLL 236
            ++    + +      A   T +   +Y++W Y + +W   NKG R+DH  +SP+    +
Sbjct: 183 TEALETLRGEAGWIDAARLLTPEPEKIYTWWSYRSPNWELANKGRRLDHTWVSPDLAGTV 242

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263
               +  + RGW KPSDH PV ++L++
Sbjct: 243 RRVAVFREARGWEKPSDHVPVTLTLEL 269


>gi|281423696|ref|ZP_06254609.1| exodeoxyribonuclease III [Prevotella oris F0302]
 gi|281402248|gb|EFB33079.1| exodeoxyribonuclease III [Prevotella oris F0302]
          Length = 250

 Score =  183 bits (464), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 69/261 (26%), Positives = 110/261 (42%), Gaps = 12/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +  + +   +  N D  CLQETK +      +       +     +
Sbjct: 1   MKFISWNVNGLRACVGKDFSQSFETLNADFFCLQETKMQAGQLDLQ-FPGYTSYWNYADK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI ++ +PI +   +  D+ D + R I   +                   +   
Sbjct: 60  KGYSGTAIYARKEPIAVTYGIGIDEHDHEGRVITLEYDNFFLVTVYTPNAQDGLRRLDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +   +    RL+ ++P+I  GD N+  Q  D  NP     +A FT E R  
Sbjct: 120 M------TWEDDFQAYLHRLDEQKPVIVCGDLNVAHQEIDLKNPKSNRRNAGFTDEERDK 173

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
             +L + GFTD  R  +     YS+W Y   +  KN G RID+ ++S      L  A I 
Sbjct: 174 MTQLLSHGFTDTFRTLYPEQVTYSWWSYRFRAREKNAGWRIDYFLISDRLRPQLKDASIH 233

Query: 243 TKPRGWTKPSDHTPVIVSLDI 263
           T+  G    SDH P+ V L++
Sbjct: 234 TEIFG----SDHCPIEVDLEL 250


>gi|323344424|ref|ZP_08084649.1| exodeoxyribonuclease III [Prevotella oralis ATCC 33269]
 gi|323094551|gb|EFZ37127.1| exodeoxyribonuclease III [Prevotella oralis ATCC 33269]
          Length = 249

 Score =  183 bits (464), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 63/259 (24%), Positives = 102/259 (39%), Gaps = 12/259 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +  +     K  + D  CLQETK +              +     +
Sbjct: 1   MKLISWNVNGLRACVGKDFETSFKSLDADFFCLQETKMQAGQLDL-AFNGYQSYWNYADK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K  P+ +   +  D+ D + R I                       +   
Sbjct: 60  KGYSGTAIFTKQTPLNVTYGMGIDEHDHEGRVITLETENFFLVTVYTPNSQDELRRLEYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +   +     L+  +P+I  GD N+  +  D  NP     +A FT E R+ 
Sbjct: 120 M------RWEDDFKAYLLALDARKPVIVCGDMNVAHEEIDIKNPKTNRRNAGFTDEEREK 173

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
             +L   GF D  R  +     YS+W Y   +  +N G RID+ ++S      +  A+I 
Sbjct: 174 MTELLAGGFIDTFRTLYPEQVTYSWWSYRFRARERNTGWRIDYFLISERLKERIADAKIH 233

Query: 243 TKPRGWTKPSDHTPVIVSL 261
           T   G    SDH P+ + L
Sbjct: 234 TDIYG----SDHCPIELDL 248


>gi|148251797|ref|YP_001236382.1| putative exodeoxyribonuclease III (xthA) [Bradyrhizobium sp. BTAi1]
 gi|146403970|gb|ABQ32476.1| putative exodeoxyribonuclease III (xthA) [Bradyrhizobium sp. BTAi1]
          Length = 271

 Score =  183 bits (464), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 78/271 (28%), Positives = 121/271 (44%), Gaps = 11/271 (4%)

Query: 4   VTVA--TWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETC 60
           + +   TWN+NS+R RI  +A  IK+  PD++CLQETK  D  FP +  + L Y HI   
Sbjct: 1   MRLVLTTWNINSVRLRIDLVAKLIKQVRPDVLCLQETKCIDDAFPLKRFKRLGYEHIALN 60

Query: 61  GQKSYNGVAILSKYQPIEI-VTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
           GQK Y+GVA++SK+      V                       + L + N Y+P G  I
Sbjct: 61  GQKGYHGVAVISKWPFDSTGVRTFCDKVDSRHISVAFGEKAQLARPLVLHNFYVPAGGDI 120

Query: 120 T----STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
                + K++ K+ ++             ++  I  GD N+ P  HD ++          
Sbjct: 121 PDPALNPKFEHKLQFLDEMKACEPLHPRGDDRHILVGDLNVAPHEHDVWSHKQLLKVVSH 180

Query: 176 TLEVRQSFQKLQNMGFTDAI--RATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEA 232
           T    +     Q+ G    +       +  +Y++W Y A  W+  N+G R+DHI +S   
Sbjct: 181 TPIECEKLLAAQSHGAWVDVARERIPMSEKVYTWWSYRAADWTVGNRGRRLDHIWVSRAL 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              +    I    R W +PSDH PV V+LD+
Sbjct: 241 KDNVTDFSILRDARSWERPSDHVPVTVTLDV 271


>gi|323483337|ref|ZP_08088727.1| hypothetical protein HMPREF9474_00476 [Clostridium symbiosum
           WAL-14163]
 gi|323691163|ref|ZP_08105441.1| exodeoxyribonuclease III [Clostridium symbiosum WAL-14673]
 gi|323403435|gb|EGA95743.1| hypothetical protein HMPREF9474_00476 [Clostridium symbiosum
           WAL-14163]
 gi|323504773|gb|EGB20557.1| exodeoxyribonuclease III [Clostridium symbiosum WAL-14673]
          Length = 251

 Score =  183 bits (464), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 75/259 (28%), Positives = 114/259 (44%), Gaps = 13/259 (5%)

Query: 5   TVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
            + +WNVN +RA +        KE + DI C+QE+K +      E L     +     +K
Sbjct: 3   KLISWNVNGLRACVGKGFLDIFKELDADIFCIQESKLQGGQIDLE-LDGYYQYWSYAEKK 61

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            Y+G A+ +K +P+ +   L  +  D + R I A F                 +     +
Sbjct: 62  GYSGTALFTKEEPLSVTYGLGIEAHDHEGRVITAEFPD-----YYVITCYTPNSQDGLAR 116

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
              ++ W   FL +  + LE  +P+IF GD N+  +  D  NP     +A FT E R  F
Sbjct: 117 LPYRMQWEDDFLSYLKK-LEEHKPVIFCGDLNVAHREIDLKNPKSNRKNAGFTDEERGKF 175

Query: 184 QKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
            +L   GF D  R  +     +YS+W Y   +  KN G RID+  +S      L SA I 
Sbjct: 176 TQLLESGFIDTYRHFYPDQEGIYSWWSYRFKAREKNAGWRIDYFCVSKALEDRLESAMIH 235

Query: 243 TKPRGWTKPSDHTPVIVSL 261
           T+  G    SDH PV + +
Sbjct: 236 TEIMG----SDHCPVELVI 250


>gi|118617059|ref|YP_905391.1| exodeoxyribonuclease III protein XthA [Mycobacterium ulcerans
           Agy99]
 gi|118569169|gb|ABL03920.1| exodeoxyribonuclease III protein XthA [Mycobacterium ulcerans
           Agy99]
          Length = 264

 Score =  183 bits (464), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 73/257 (28%), Positives = 116/257 (45%), Gaps = 7/257 (2%)

Query: 12  NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAIL 71
           NSIR R+  +  W++  + D++ +QETK  D  FP   L  L Y +   G   +NGVAI 
Sbjct: 2   NSIRTRLPRVLDWLERADVDVLAIQETKCSDTQFPALPLFELGYEVAHVGFNQWNGVAIA 61

Query: 72  SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT-----LRIGNLYLPHGNPITSTKYDD 126
           S+    ++     G         + A             +R+ +LY+P+G  +    Y  
Sbjct: 62  SRVGIDDVQISFDGQPAWSGKPEVAAAAEARAVGATCGGVRVWSLYVPNGRALEDPHYTY 121

Query: 127 KISWIKRFLRFASQRLELEE--PLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ 184
           K+ W+      A   L+ +   P+  AGD+NI P   D +N   +      +   R++F 
Sbjct: 122 KLDWLAALRDTAQCWLKNDPGAPIALAGDFNIAPTDEDVWNTEFFTGATRVSEPERKAFN 181

Query: 185 KLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK 244
            + +  FTD +R       +Y++W Y    + K +G+RID I+ SP     +  A+I   
Sbjct: 182 AIVDAQFTDLVRPFTPGPGVYTYWYYTQLRFPKKQGMRIDFILGSPALAGRVVDAQIVRD 241

Query: 245 PRGWTKPSDHTPVIVSL 261
            R    PSDH PV V L
Sbjct: 242 ERKGKAPSDHAPVFVDL 258


>gi|30263740|ref|NP_846117.1| exodeoxyribonuclease III [Bacillus anthracis str. Ames]
 gi|47529159|ref|YP_020508.1| exodeoxyribonuclease III [Bacillus anthracis str. 'Ames Ancestor']
 gi|49186585|ref|YP_029837.1| exodeoxyribonuclease III [Bacillus anthracis str. Sterne]
 gi|65321063|ref|ZP_00394022.1| COG0708: Exonuclease III [Bacillus anthracis str. A2012]
 gi|118478961|ref|YP_896112.1| exodeoxyribonuclease III [Bacillus thuringiensis str. Al Hakam]
 gi|165872421|ref|ZP_02217056.1| exodeoxyribonuclease III [Bacillus anthracis str. A0488]
 gi|167639873|ref|ZP_02398142.1| exodeoxyribonuclease III [Bacillus anthracis str. A0193]
 gi|170706859|ref|ZP_02897317.1| exodeoxyribonuclease III [Bacillus anthracis str. A0389]
 gi|177652038|ref|ZP_02934584.1| exodeoxyribonuclease III [Bacillus anthracis str. A0174]
 gi|190568466|ref|ZP_03021373.1| exodeoxyribonuclease III [Bacillus anthracis Tsiankovskii-I]
 gi|196034121|ref|ZP_03101531.1| exodeoxyribonuclease III [Bacillus cereus W]
 gi|196038388|ref|ZP_03105697.1| exodeoxyribonuclease III [Bacillus cereus NVH0597-99]
 gi|196044665|ref|ZP_03111900.1| exodeoxyribonuclease III [Bacillus cereus 03BB108]
 gi|218904866|ref|YP_002452700.1| exodeoxyribonuclease III [Bacillus cereus AH820]
 gi|225865717|ref|YP_002751095.1| exodeoxyribonuclease III [Bacillus cereus 03BB102]
 gi|227813360|ref|YP_002813369.1| exodeoxyribonuclease III [Bacillus anthracis str. CDC 684]
 gi|228916370|ref|ZP_04079939.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228928786|ref|ZP_04091820.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228935036|ref|ZP_04097866.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar andalousiensis
           BGSC 4AW1]
 gi|228947401|ref|ZP_04109692.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar monterrey BGSC
           4AJ1]
 gi|229092775|ref|ZP_04223913.1| Exodeoxyribonuclease [Bacillus cereus Rock3-42]
 gi|229123254|ref|ZP_04252458.1| Exodeoxyribonuclease [Bacillus cereus 95/8201]
 gi|229185967|ref|ZP_04313138.1| Exodeoxyribonuclease [Bacillus cereus BGSC 6E1]
 gi|229603277|ref|YP_002867975.1| exodeoxyribonuclease III [Bacillus anthracis str. A0248]
 gi|254721165|ref|ZP_05182956.1| exodeoxyribonuclease III [Bacillus anthracis str. A1055]
 gi|254735775|ref|ZP_05193481.1| exodeoxyribonuclease III [Bacillus anthracis str. Western North
           America USA6153]
 gi|254751095|ref|ZP_05203134.1| exodeoxyribonuclease III [Bacillus anthracis str. Vollum]
 gi|254759412|ref|ZP_05211437.1| exodeoxyribonuclease III [Bacillus anthracis str. Australia 94]
 gi|30258384|gb|AAP27603.1| exodeoxyribonuclease III [Bacillus anthracis str. Ames]
 gi|47504307|gb|AAT32983.1| exodeoxyribonuclease III [Bacillus anthracis str. 'Ames Ancestor']
 gi|49180512|gb|AAT55888.1| exodeoxyribonuclease III [Bacillus anthracis str. Sterne]
 gi|118418186|gb|ABK86605.1| exodeoxyribonuclease III [Bacillus thuringiensis str. Al Hakam]
 gi|164711859|gb|EDR17401.1| exodeoxyribonuclease III [Bacillus anthracis str. A0488]
 gi|167512274|gb|EDR87651.1| exodeoxyribonuclease III [Bacillus anthracis str. A0193]
 gi|170128277|gb|EDS97146.1| exodeoxyribonuclease III [Bacillus anthracis str. A0389]
 gi|172082407|gb|EDT67472.1| exodeoxyribonuclease III [Bacillus anthracis str. A0174]
 gi|190560470|gb|EDV14448.1| exodeoxyribonuclease III [Bacillus anthracis Tsiankovskii-I]
 gi|195993195|gb|EDX57153.1| exodeoxyribonuclease III [Bacillus cereus W]
 gi|196024700|gb|EDX63372.1| exodeoxyribonuclease III [Bacillus cereus 03BB108]
 gi|196030796|gb|EDX69394.1| exodeoxyribonuclease III [Bacillus cereus NVH0597-99]
 gi|218539943|gb|ACK92341.1| exodeoxyribonuclease III [Bacillus cereus AH820]
 gi|225789176|gb|ACO29393.1| exodeoxyribonuclease III [Bacillus cereus 03BB102]
 gi|227006454|gb|ACP16197.1| exodeoxyribonuclease III [Bacillus anthracis str. CDC 684]
 gi|228597519|gb|EEK55168.1| Exodeoxyribonuclease [Bacillus cereus BGSC 6E1]
 gi|228660030|gb|EEL15666.1| Exodeoxyribonuclease [Bacillus cereus 95/8201]
 gi|228690573|gb|EEL44354.1| Exodeoxyribonuclease [Bacillus cereus Rock3-42]
 gi|228812254|gb|EEM58584.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar monterrey BGSC
           4AJ1]
 gi|228824606|gb|EEM70408.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar andalousiensis
           BGSC 4AW1]
 gi|228830871|gb|EEM76474.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228843280|gb|EEM88359.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|229267685|gb|ACQ49322.1| exodeoxyribonuclease III [Bacillus anthracis str. A0248]
          Length = 252

 Score =  183 bits (463), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 68/262 (25%), Positives = 123/262 (46%), Gaps = 14/262 (5%)

Query: 4   VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           +   +WNVN +RA         +++E+N DI CLQE K ++        +    +     
Sbjct: 1   MKFISWNVNGLRAVIAKGGFLEYLEESNADIFCLQEIKLQEGQIDLNV-EGYYTYWNYAV 59

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G AI SK +P+ +   L  ++ D + R I   F        I  LY P+ +    
Sbjct: 60  KKGYSGTAIFSKKEPLSVTYGLGIEEHDQEGRVITLEFE----DFYIITLYTPN-SKRGL 114

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            + + ++ W   F  +  + L+ ++ ++F GD N+  +  D  NP     +  F+ E R+
Sbjct: 115 ERLEYRMKWEDDFRAYIKR-LDEKKSVVFCGDLNVAHKEIDLKNPKSNRKNPGFSDEERE 173

Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            F  +   GF D  R  +      YS+W Y   + +KN G R+D+ ++S      + +A+
Sbjct: 174 KFTCILEEGFIDTYRYLYPDQEGAYSWWSYRMGARAKNIGWRLDYFVVSERMKDQITAAK 233

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I+++  G    SDH PV + ++
Sbjct: 234 INSEVMG----SDHCPVELHIN 251


>gi|317051838|ref|YP_004112954.1| exodeoxyribonuclease III [Desulfurispirillum indicum S5]
 gi|316946922|gb|ADU66398.1| exodeoxyribonuclease III [Desulfurispirillum indicum S5]
          Length = 272

 Score =  183 bits (463), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 85/270 (31%), Positives = 128/270 (47%), Gaps = 10/270 (3%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64
           T   +N+N IRA  H L A I++  PD+I LQETK  D+ FP + ++ L Y  E  GQ  
Sbjct: 3   TFICFNINGIRAHFHQLEAIIQKYQPDVIGLQETKVSDELFPVDAIRELGYCSEFHGQPG 62

Query: 65  YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI-NTQTLRIGNLYLPHGNPITSTK 123
           + GVA+LS+ QP  +    PGD  DVQ RFI A + + +   + + N Y P G      +
Sbjct: 63  HYGVALLSRAQPNSVRKSFPGDGPDVQRRFIGADYALSDGSRITVLNGYFPQGESRDHPQ 122

Query: 124 -YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFT 176
            +  K  +      +  Q  +  + L+  GD NI P         D     +     CF 
Sbjct: 123 KFPAKEKFYADLTAYLQQCHQPAQQLLLMGDMNIAPTDSDVGIGEDNARRWLRSGKCCFL 182

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK--NKGIRIDHIMLSPEATS 234
            E R  +Q L + G  DA R         S++DY +  + +   +G+RIDH++++     
Sbjct: 183 PEERLWYQSLTDWGLRDAHRLLFPDMQELSWFDYRSRGFEREPKRGLRIDHMLVTTPLEE 242

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
            L    ID + R   KPSDH P+ V + + 
Sbjct: 243 KLLDGGIDYEIRALEKPSDHCPIWVKIRLS 272


>gi|27375729|ref|NP_767258.1| exodeoxyribonuclease III [Bradyrhizobium japonicum USDA 110]
 gi|27348867|dbj|BAC45883.1| exodeoxyribonuclease III [Bradyrhizobium japonicum USDA 110]
          Length = 271

 Score =  183 bits (463), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 75/271 (27%), Positives = 122/271 (45%), Gaps = 11/271 (4%)

Query: 4   VTV--ATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETC 60
           + +   TWN+NS+R RI  +A ++K   PD++CLQETK  D  FP +  + L Y H+   
Sbjct: 1   MRLSLTTWNINSVRLRIDLVAKFLKSARPDVLCLQETKCIDDAFPLKRFKRLGYEHVALN 60

Query: 61  GQKSYNGVAILSKYQPI-EIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
           GQK Y+GVAI+S+     + +                 T     + L + N Y+P G  I
Sbjct: 61  GQKGYHGVAIVSRIPFESKDIRTFCDKVDSRHISVSFGTQANIAKPLVLHNFYVPAGGDI 120

Query: 120 TST----KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
                  K+D K+ ++             ++  I  GD N+ P  +D ++          
Sbjct: 121 PDPALNEKFDHKLRFLDEMTACEPLHPRGDDRHILVGDLNVAPHENDVWSHKQLLKVVSH 180

Query: 176 TL-EVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWS-KNKGIRIDHIMLSPEA 232
           T  E  +    L    + D  R        +Y++W Y +  W+  ++G R+DHI +S   
Sbjct: 181 TPVETEKLKAALAAGEWVDVARERIPMSEKVYTWWSYRSADWTVGDRGRRLDHIWVSRAL 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              +   +I    R W +PSDH PV V+L++
Sbjct: 241 KDAVQDFKILRDARSWERPSDHVPVTVTLEV 271


>gi|295838281|ref|ZP_06825214.1| exodeoxyribonuclease III [Streptomyces sp. SPB74]
 gi|197698261|gb|EDY45194.1| exodeoxyribonuclease III [Streptomyces sp. SPB74]
          Length = 274

 Score =  183 bits (463), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 57/270 (21%), Positives = 100/270 (37%), Gaps = 8/270 (2%)

Query: 1   MSVVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           +SV+ V + NVN +RA        W+   + D++CLQE + E    P    +   +    
Sbjct: 6   LSVLIVTSVNVNGLRAAAKKGFTEWLAGTSADVLCLQEVRAEAHQLPEGVARPEGWFSLH 65

Query: 60  CG--QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
                K   GV++ ++ +P  + T     + D   R++EA     T    +       G 
Sbjct: 66  APAADKGRAGVSLYTRREPDRVRTGFGSAEFDGSGRYVEADLPGVTVA-SLYLPSGEVGT 124

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
                KY     ++        +       ++  GD+NI     D  N      +A F  
Sbjct: 125 ERQEQKYRFMDEFLAYLKELRGRAAAEGREVLVCGDWNIAHTEADLKNWRGNRKNAGFLP 184

Query: 178 EVRQSFQKLQN----MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
           E R+   ++ +                T   YS+W Y   ++  + G RID+ M S    
Sbjct: 185 EEREWLSRVLDPGDGGYVDVVRGQYPGTEGPYSWWSYRGRAFDNDTGWRIDYHMASAGLA 244

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                A ++       + SDH PV V+ ++
Sbjct: 245 ERAVKAEVERAATHAERWSDHAPVTVTYEM 274


>gi|239930740|ref|ZP_04687693.1| exodeoxyribonuclease [Streptomyces ghanaensis ATCC 14672]
          Length = 266

 Score =  183 bits (463), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 54/267 (20%), Positives = 98/267 (36%), Gaps = 8/267 (2%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++TV + NVN +RA        W+ +   D +CLQE + E +  P +  +   +H+    
Sbjct: 1   MLTVTSVNVNGLRAAAKKGFVEWLAQTPADALCLQEVRAEPQQLPEQVREPEGWHVVHAP 60

Query: 62  Q--KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
              K   GV++ ++ +P  +       + D   R++EA     T    +       G   
Sbjct: 61  AAAKGRAGVSLYTRREPDRVQVGFGSTEFDGSGRYVEADLPGVTVA-SLYLPSGEVGTER 119

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K      ++        +       ++  GD+NI  +  D  N      ++ F  E 
Sbjct: 120 QEEKVRFMGEFLAYLKELRERAAGEGREVVVCGDWNIAHEKADLKNWRGNTKNSGFLPEE 179

Query: 180 RQSF----QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
           R+                  +   D    YS+W Y   ++  + G RID+ M +P     
Sbjct: 180 REWLSRVLTPTDGGYVDVVRKLHPDVDGPYSWWSYRGRAFDNDTGWRIDYQMATPGLAER 239

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262
              A ++       + SDH PV V  +
Sbjct: 240 AVEAYVERAATHAERWSDHAPVTVVFE 266


>gi|325269387|ref|ZP_08136004.1| exodeoxyribonuclease III [Prevotella multiformis DSM 16608]
 gi|324988308|gb|EGC20274.1| exodeoxyribonuclease III [Prevotella multiformis DSM 16608]
          Length = 249

 Score =  183 bits (463), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 65/260 (25%), Positives = 114/260 (43%), Gaps = 12/260 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +  +     K  + D  CLQETK +              +     +
Sbjct: 1   MKLISWNVNGLRACVGKDFEQQFKALDADFFCLQETKMQAGQLDIS-FPGYTSYWNYADK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K++P+++   +  D+ D + R I      +   + +       G      
Sbjct: 60  KGYSGTAIFTKHKPLDVTYGIGMDEHDHEGRVITLEMD-DFYLVTVYTPNSQDGLRRLDY 118

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +        ++  +     L+ ++P++  GD N+  +  D  NP     +A FT E R+ 
Sbjct: 119 R-----MKWEKDFQNYLHWLDEKKPVVVCGDMNVAHEEIDIKNPKTNRRNAGFTDEEREK 173

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
             +L + GF D  R+ +     YS+W Y   +  +N G RID+ ++S      L  A+I 
Sbjct: 174 MTQLLDSGFIDTFRSLYPEQVTYSWWSYRFRARERNTGWRIDYFLISERLRDRLEDAKIH 233

Query: 243 TKPRGWTKPSDHTPVIVSLD 262
           T+  G    SDH P+ V L 
Sbjct: 234 TEIMG----SDHCPIEVDLK 249


>gi|218532288|ref|YP_002423104.1| exodeoxyribonuclease III Xth [Methylobacterium chloromethanicum
           CM4]
 gi|218524591|gb|ACK85176.1| exodeoxyribonuclease III Xth [Methylobacterium chloromethanicum
           CM4]
          Length = 269

 Score =  183 bits (463), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 74/267 (27%), Positives = 126/267 (47%), Gaps = 7/267 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62
           +TV TWN+NS+R RI ++  +++E  PD++CLQETK  D  FP +  +   Y +I   GQ
Sbjct: 3   LTVTTWNINSVRLRIESVLRFLREAQPDVLCLQETKCPDDLFPLKAFKGSGYENIVFAGQ 62

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLD-VQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           K YNGVAI+S++  +        +  D      +          + + + Y+P G  +  
Sbjct: 63  KGYNGVAIISRFPLLTRDVMSFCERPDARHISAVLGPEAGPAAGIVLHDFYVPAGGDMPH 122

Query: 122 TKYDDKISWIKRFLRFASQR--LELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              + K +    FL          +  P I  GD N+ P  HD ++     +    T   
Sbjct: 123 RDLNPKFAHKLDFLSELRGWGGRRVSGPAILVGDLNVAPLEHDVWSHKQLLDVVSHTPVE 182

Query: 180 RQS--FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLL 236
            ++    + +      A   T +   +Y++W Y + +W   NKG R+DH  +SP+    +
Sbjct: 183 TEALETLRGEAGWIDAARLLTPEPEKIYTWWSYRSPNWELANKGRRLDHTWVSPDLAGTV 242

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263
               +  + RGW +PSDH PV ++L++
Sbjct: 243 RRVAVFREARGWERPSDHVPVTLTLEL 269


>gi|242309877|ref|ZP_04809032.1| exodeoxyribonuclease LexA [Helicobacter pullorum MIT 98-5489]
 gi|239523878|gb|EEQ63744.1| exodeoxyribonuclease LexA [Helicobacter pullorum MIT 98-5489]
          Length = 256

 Score =  183 bits (463), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 71/263 (26%), Positives = 118/263 (44%), Gaps = 13/263 (4%)

Query: 2   SVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           +++ + +WNVN +RA +      +    + D+ C+QE+K + +   F+   +   +  + 
Sbjct: 3   TIMKLISWNVNGLRACMNKGFMDFFNTIDADVFCIQESKMQKEQATFD-FPNYEEYWNSA 61

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GVAI SK +P+ +   +     D + R I A +        +          + 
Sbjct: 62  EKKGYSGVAIFSKKKPLSVAYDMGISHHDKEGRIITAEY---NDFFLVNVYTPNSKRELE 118

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +Y       +   R   + LE+ +P+I  GD N+  +  D  NP     +A FT E R
Sbjct: 119 RLEYR---MEWEDDFRNFLKNLEVTKPVIVCGDLNVAHKEIDLKNPKTNRRNAGFTDEER 175

Query: 181 QSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           +    L + GFTD  R  H T    YS+W Y   +   N G RID+ + S    S L SA
Sbjct: 176 EKMSVLLDSGFTDTFRYFHPTLEGAYSWWSYMGKARENNTGWRIDYFLCSKALDSKLKSA 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
            I  +  G    SDH PV + ++
Sbjct: 236 SIYPEIFG----SDHCPVGLEIN 254


>gi|257886665|ref|ZP_05666318.1| AP endonuclease [Enterococcus faecium 1,141,733]
 gi|257895240|ref|ZP_05674893.1| AP endonuclease [Enterococcus faecium Com12]
 gi|293377228|ref|ZP_06623433.1| exodeoxyribonuclease III [Enterococcus faecium PC4.1]
 gi|257822719|gb|EEV49651.1| AP endonuclease [Enterococcus faecium 1,141,733]
 gi|257831805|gb|EEV58226.1| AP endonuclease [Enterococcus faecium Com12]
 gi|292644089|gb|EFF62194.1| exodeoxyribonuclease III [Enterococcus faecium PC4.1]
          Length = 250

 Score =  183 bits (463), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 70/261 (26%), Positives = 112/261 (42%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +  N      E + D  CLQETK +      + L     +     +
Sbjct: 1   MKFISWNVNGLRAIVNKNFLEVFHELDADFFCLQETKLQAGQIDLD-LPGYYQYWNYAER 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K   +     +  D  D + R I   ++                +     
Sbjct: 60  KGYSGTAIFAKEPALNATYGMGIDIHDTEGRLITLEYSDF-----FLVTCYTPNSQSELK 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           + D ++ W + F  +    L+ ++P+I  GD N+  Q  D  N    + +A FT E R +
Sbjct: 115 RLDYRLEWEEAFYNYLEN-LKKQKPVIVCGDLNVAHQTIDLKNWKTNQKNAGFTPEERAA 173

Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             +L + GF D  R  +     +YS+W+Y  +S   N G RID+ + S +    L  A+I
Sbjct: 174 LSRLLDNGFIDTFRYFYPTQEGVYSWWNYRFNSRKNNAGWRIDYFLTSKDLAPRLADAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            T   G    SDH PV + L 
Sbjct: 234 HTDIMG----SDHCPVELDLK 250


>gi|229174398|ref|ZP_04301930.1| Exodeoxyribonuclease [Bacillus cereus MM3]
 gi|228608958|gb|EEK66248.1| Exodeoxyribonuclease [Bacillus cereus MM3]
          Length = 252

 Score =  183 bits (463), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 67/262 (25%), Positives = 119/262 (45%), Gaps = 14/262 (5%)

Query: 4   VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + +WNVN +RA         +++E+N DI CLQE K +D        +    +     
Sbjct: 1   MKLISWNVNGLRAVIAKGGFLEYLEESNVDIFCLQEIKLQDGQIDLNP-EGYYTYWNYAV 59

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G AI +K +P+ +   L  ++ D + R I   F                 +    
Sbjct: 60  KKGYSGTAIFTKKEPLSVTYGLGIEEHDQEGRVITLEFEDFYMI-----TLYTPNSKRGL 114

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            + D ++ W   F  +  Q L+ ++P++F GD N+  +  D  NP     +  F+ E R+
Sbjct: 115 ERLDYRMKWEDDFRAYIKQ-LDEKKPVVFCGDLNVAHKEIDLKNPKSNRKNPGFSDEERE 173

Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            F  +   GF D  R  +      YS+W Y   + +KN G R+D+ ++S      +  A+
Sbjct: 174 KFTCILEEGFIDTYRYLYPDQEGAYSWWSYRMGARAKNIGWRLDYFVVSERMKDKITEAK 233

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I+++  G    SDH PV + ++
Sbjct: 234 INSEVMG----SDHCPVELHIN 251


>gi|163853428|ref|YP_001641471.1| exodeoxyribonuclease III Xth [Methylobacterium extorquens PA1]
 gi|254563357|ref|YP_003070452.1| exodeoxyribonuclease III [Methylobacterium extorquens DM4]
 gi|163665033|gb|ABY32400.1| exodeoxyribonuclease III Xth [Methylobacterium extorquens PA1]
 gi|254270635|emb|CAX26639.1| Exodeoxyribonuclease III (Exonuclease III) (EXO III) (AP
           endonuclease VI) [Methylobacterium extorquens DM4]
          Length = 269

 Score =  183 bits (463), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 74/267 (27%), Positives = 126/267 (47%), Gaps = 7/267 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62
           +TV TWN+NS+R RI ++  +++E  PD++CLQETK  D  FP +  +   Y +I   GQ
Sbjct: 3   LTVTTWNINSVRLRIESVLRFLREAQPDVLCLQETKCPDDLFPLKAFKGSGYENIVFAGQ 62

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLD-VQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           K YNGVAI+S++  +        +  D      +          + + + Y+P G  +  
Sbjct: 63  KGYNGVAIISRFPLLTRDVMSFCERPDARHISAVLGPEAGPAAGIVLHDFYVPAGGDMPH 122

Query: 122 TKYDDKISWIKRFLRFASQR--LELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              + K +    FL          +  P I  GD N+ P  HD ++     +    T   
Sbjct: 123 RDLNPKFAHKLDFLSELRVWGGRRVSGPAILVGDLNVAPLEHDVWSHKQLLDVVSHTPVE 182

Query: 180 RQS--FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLL 236
            ++    + +      A   T +   +Y++W Y + +W   NKG R+DH  +SP+    +
Sbjct: 183 TEALETLRGEAGWIDAARLLTPEPEKIYTWWSYRSPNWELANKGRRLDHTWVSPDLAGTV 242

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263
               +  + RGW +PSDH PV ++L++
Sbjct: 243 RRVAVFREARGWERPSDHVPVTLTLEL 269


>gi|228940815|ref|ZP_04103375.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar berliner ATCC
           10792]
 gi|228973735|ref|ZP_04134313.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar thuringiensis
           str. T01001]
 gi|228980291|ref|ZP_04140602.1| Exodeoxyribonuclease [Bacillus thuringiensis Bt407]
 gi|228779396|gb|EEM27652.1| Exodeoxyribonuclease [Bacillus thuringiensis Bt407]
 gi|228785981|gb|EEM33982.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar thuringiensis
           str. T01001]
 gi|228818829|gb|EEM64894.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar berliner ATCC
           10792]
 gi|326941450|gb|AEA17346.1| exodeoxyribonuclease III [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 252

 Score =  182 bits (462), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 67/262 (25%), Positives = 120/262 (45%), Gaps = 14/262 (5%)

Query: 4   VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + +WNVN +RA         +++E++ DI CLQE K ++       L+    +     
Sbjct: 1   MKLISWNVNGLRAVIAKGGFLEYLEESSADIFCLQEIKLQEGQIDLN-LEGYYTYWNYAV 59

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G AI SK +P+ +   L  ++ D + R I   F                 +    
Sbjct: 60  KKGYSGTAIFSKKEPLSVTYGLGIEEHDQEGRLITLEFEDFYMI-----TLYTPNSKRGL 114

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            + D ++ W   F  +  + L+ ++P+IF GD N+  +  D  NP     +  F+ E R+
Sbjct: 115 ERLDYRMKWEDDFRSYIKR-LDEKKPVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEERE 173

Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            F  +   GF D  R  +      YS+W Y   + +KN G R+D+ ++S      +  A+
Sbjct: 174 KFTCILEEGFVDTYRYLYPNQEGAYSWWSYRMGARAKNIGWRLDYFVVSERMKDQITEAK 233

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I+++  G    SDH PV + ++
Sbjct: 234 INSEVMG----SDHCPVELHIN 251


>gi|190572480|ref|YP_001970325.1| putative endonuclease/exonuclease/phosphatase family protein
           [Stenotrophomonas maltophilia K279a]
 gi|190010402|emb|CAQ44010.1| putative endonuclease/exonuclease/phosphatase family protein
           [Stenotrophomonas maltophilia K279a]
          Length = 266

 Score =  182 bits (462), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 65/275 (23%), Positives = 111/275 (40%), Gaps = 24/275 (8%)

Query: 4   VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + ++N N IR A       W +  + D++C+QETK ++        +   +H      
Sbjct: 1   MRIISFNANGIRSAATKGFLDWFRAQDADVLCIQETKAQEDQLSDPMFRPDGHHCFYRDA 60

Query: 62  --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GVAI SK +P +++T L     D + R+IEA +      L + + Y+P G+  
Sbjct: 61  ITKKGYSGVAIYSKREPDQVITSLGWAPFDDEGRYIEARYG----NLSVVSFYIPSGS-S 115

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +   K   ++       +        +  GD+NI+    D  N    + ++    E 
Sbjct: 116 GDLRQGFKFEVMEWLRPILEEWARSGRDYVLCGDWNIVRSALDIKNWKSNQKNSGCLPEE 175

Query: 180 RQSFQKLQNMG-----------FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
           R     L               + DA R  + T   Y++W     + + N G RID+  +
Sbjct: 176 RDWLNALCADHGQATDVTAGRGWADAYRLLNPTGEDYTWWSNRGAARANNVGWRIDYQFI 235

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +P     L S  I    R     SDH P  V  D+
Sbjct: 236 TPGLRDRLRSCSIYRDER----FSDHAPFTVDYDL 266


>gi|329895423|ref|ZP_08271004.1| Exodeoxyribonuclease III [gamma proteobacterium IMCC3088]
 gi|328922306|gb|EGG29652.1| Exodeoxyribonuclease III [gamma proteobacterium IMCC3088]
          Length = 256

 Score =  182 bits (462), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 71/263 (26%), Positives = 113/263 (42%), Gaps = 15/263 (5%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPF---ETLQSLNYHIET 59
           + + +WNVN IRA    +     +   PD++CLQETK +D        E   +      +
Sbjct: 1   MRLVSWNVNGIRAVTKKDFFESFERMAPDVLCLQETKAQDDQVLEALTELDPAYKVFSNS 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G AI+++ +PI +   +   + D + R + A F        +       G+ +
Sbjct: 61  AEKKGYSGTAIITRVEPISVTADMGMPEHDTEGRVLCAEFETFY---LVTVYTPNSGSEL 117

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND-ACFTLE 178
               Y               + LE  +P++  GD N+  Q  D   P    N  A +   
Sbjct: 118 KRLDYRQSWDKDFADY---LKTLEQTKPVVVCGDLNVAHQDIDLARPKQNYNKSAGYMQA 174

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
               F +L ++GF D  R  +     YS+W Y A +  KN G RID+ +++PE TS L  
Sbjct: 175 EIDGFDRLVDLGFVDTYRHFNPNTAKYSWWSYRAGAREKNIGWRIDYFLVTPELTSSLTG 234

Query: 239 ARIDTKPRGWTKPSDHTPVIVSL 261
           A I     G    SDH PV + +
Sbjct: 235 AEIYNDVYG----SDHCPVGIDI 253


>gi|311070625|ref|YP_003975548.1| exodeoxyribonuclease III [Bacillus atrophaeus 1942]
 gi|310871142|gb|ADP34617.1| exodeoxyribonuclease III [Bacillus atrophaeus 1942]
          Length = 252

 Score =  182 bits (462), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 69/263 (26%), Positives = 123/263 (46%), Gaps = 14/263 (5%)

Query: 4   VTVATWNVNSIRARIH--NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + +WNVN +RA +   N  ++++E N DI CLQE K +D     E  +  + +     
Sbjct: 1   MKLMSWNVNGLRALLTKMNFNSYLEEENVDIFCLQEIKLQDGQIKLEP-EGYHVYWNYAE 59

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G AI +K +P+ +   L   + D + R I   F      + +       G     
Sbjct: 60  KKGYSGTAIFTKKEPLAVTYGLGIKEHDQEGRLITLEFENM-YVITVYTPNAKRGLERID 118

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            + D      +       + L++++P++  GD N+  Q  D  NP     +A F+ + R+
Sbjct: 119 YRMD-----WEDAFLSYIKALDVKKPVVLCGDLNVAHQEIDLKNPKANRKNAGFSDQERE 173

Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            F ++   GF D  R  H      YS+W Y  ++ +KN G R+D+ ++S      +  A+
Sbjct: 174 RFSQMLEEGFIDTFRYLHPDQEGAYSWWSYRMNARAKNVGWRLDYFIVSERLKKQIRGAK 233

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263
           I  +  G    SDH PV +++D+
Sbjct: 234 ICNEVMG----SDHCPVELTIDL 252


>gi|291528729|emb|CBK94315.1| exodeoxyribonuclease III [Eubacterium rectale M104/1]
          Length = 251

 Score =  182 bits (462), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 66/261 (25%), Positives = 111/261 (42%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +      +    + D  C+QE+K +      + L   + +     +
Sbjct: 1   MKFISWNVNGLRACVQKGFLDFFNSIDADFFCIQESKLQAGQIDLD-LPGYHQYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +P+ +   +  ++ D + R I   +        +   Y P+       
Sbjct: 60  KGYSGTAIFAKNEPLSVSYGIGIEEHDKEGRVITLEYD----NFYLVTCYTPNSQNELKR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
               ++ W   F  +    L+ ++P++  GD N+     D  NP     +A F+ E R  
Sbjct: 116 -LPYRMQWEDDFREYLKT-LDAKKPVVLCGDLNVAHNEIDLKNPKTNRKNAGFSDEERAK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             +L   GFTD  R  +     +YS+W Y   +  KN G RID+ + S      L  A I
Sbjct: 174 MTELLGSGFTDTFRYFYPDAEGIYSWWSYRFKAREKNAGWRIDYFITSKRINDKLQKAAI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            T   G    SDH PV V ++
Sbjct: 234 HTDVLG----SDHCPVEVDIE 250


>gi|229197850|ref|ZP_04324566.1| Exodeoxyribonuclease [Bacillus cereus m1293]
 gi|228585568|gb|EEK43670.1| Exodeoxyribonuclease [Bacillus cereus m1293]
          Length = 252

 Score =  182 bits (462), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 71/262 (27%), Positives = 124/262 (47%), Gaps = 14/262 (5%)

Query: 4   VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           +   +WNVN +RA         +++E+N DI CLQE K ++        +    +     
Sbjct: 1   MKFISWNVNGLRAVIAKGGFLEYLEESNADIFCLQEIKLQEGQIDLNV-EGYYTYWNYAV 59

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G AI SK +P+ +   L  ++ D + R I   F        I  LY P+ +    
Sbjct: 60  KKGYSGTAIFSKEEPLSVTYGLGIEEHDQEGRVITLEFE----DFYIITLYTPN-SKRGL 114

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            + D ++ W   F  +  + L+ ++P+IF GD N+  +  D  NP     +  F+ E R+
Sbjct: 115 ERLDYRMKWEDDFRVYIKR-LDEKKPVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEERE 173

Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            F  +   GF D  R  +      YS+W Y   + +KN G R+D+ ++S      + +A+
Sbjct: 174 KFTCILEEGFIDTYRYLYPDQEGAYSWWSYRMGARAKNIGWRLDYFVVSERMKDQITAAK 233

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I+++  G    SDH PV + ++
Sbjct: 234 INSEVMG----SDHCPVELHIN 251


>gi|310659330|ref|YP_003937051.1| exodeoxyribonuclease III [Clostridium sticklandii DSM 519]
 gi|308826108|emb|CBH22146.1| exodeoxyribonuclease III [Clostridium sticklandii]
          Length = 250

 Score =  182 bits (462), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 67/260 (25%), Positives = 115/260 (44%), Gaps = 13/260 (5%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN IRA +      +  E   DI C+QETK ++       L     +     +
Sbjct: 1   MKLISWNVNGIRACVKKGFLEYFDEVEADIFCIQETKLQEGQIDL-MLNDYEQYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G A+ +K +PI +   +  +  D + R I   +        + N+Y P+  P  + 
Sbjct: 60  KGYSGTAVFTKIKPISVAYGIDIEHHDTEGRVITLEYD----NFYLVNVYTPNAQPKLAR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
              +     +   R     L+ ++P+I  GD N+     D  NP     +  F+ E R  
Sbjct: 116 L--EYRMQWEDDFRRYLNDLDEKKPVIVCGDLNVAHNEIDLKNPKSNRKNPGFSDEERGK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F  L + GF D+ R  +     +Y++W Y  ++   N G RID+  +S +  + L +A I
Sbjct: 174 FTNLLDSGFIDSFRFFYPDATEMYTWWSYRFNARENNAGWRIDYFCVSNKLKNELKNAEI 233

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
                G    SDH PV++ +
Sbjct: 234 HMDILG----SDHCPVVLEI 249


>gi|150402181|ref|YP_001329475.1| exodeoxyribonuclease III Xth [Methanococcus maripaludis C7]
 gi|150033211|gb|ABR65324.1| exodeoxyribonuclease III Xth [Methanococcus maripaludis C7]
          Length = 249

 Score =  182 bits (462), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 73/260 (28%), Positives = 118/260 (45%), Gaps = 12/260 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN IRA +      +++  +PDI+C+QETK +        L     +     +
Sbjct: 1   MKMISWNVNGIRACLKNGFMDFLERESPDIMCIQETKVQSGQVQL-GLDGYFQYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +P  ++  +   + D + R +   F                 +    T
Sbjct: 60  KGYSGTAIFTKIKPNNVILGIKNTEHDGEGRVLTLEFDK-----YYLINVYTPNSQRGLT 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           + + +  W + FL +    LE E+P+IF GD N+  +  D  NP     +A FT E R  
Sbjct: 115 RLEYRQKWDQDFLNYIKT-LENEKPVIFCGDLNVAHKEIDLKNPKNNVKNAGFTPEERIG 173

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F  + + GF D  R  +     YS+W Y  ++ SKN G RID+  +S      L  A I 
Sbjct: 174 FDNIVDSGFIDTFREFNKEPDNYSWWSYRFNARSKNIGWRIDYFCISKILRDNLKDAFIM 233

Query: 243 TKPRGWTKPSDHTPVIVSLD 262
           ++  G    SDH PV +  +
Sbjct: 234 SEVMG----SDHCPVGIIFE 249


>gi|257883889|ref|ZP_05663542.1| AP endonuclease [Enterococcus faecium 1,231,501]
 gi|257819727|gb|EEV46875.1| AP endonuclease [Enterococcus faecium 1,231,501]
          Length = 250

 Score =  182 bits (462), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 70/261 (26%), Positives = 112/261 (42%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +  N      E + D  CLQETK +      + L     +     +
Sbjct: 1   MKFISWNVNGLRAIVNKNFLEVFHELDADFFCLQETKLQAGQIDLD-LPGYYQYWNYAER 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K   +     +  D  D + R I   ++                +     
Sbjct: 60  KGYSGTAIFAKKPALNATYGMGIDIHDTEGRLITLEYSDF-----FLVTCYTPNSQSELK 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           + D ++ W + F  +    L+ ++P+I  GD N+  Q  D  N    + +A FT E R +
Sbjct: 115 RLDYRLEWEEAFYNYLEN-LKKQKPVIICGDLNVAHQTIDLKNWKTNQKNAGFTPEERAA 173

Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             +L + GF D  R  +     +YS+W+Y  +S   N G RID+ + S +    L  A+I
Sbjct: 174 LSRLLDNGFVDTFRYFYPTQEGVYSWWNYRFNSRKNNAGWRIDYFLASKDLEPRLADAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            T   G    SDH PV + L 
Sbjct: 234 HTDIMG----SDHCPVELDLK 250


>gi|228959948|ref|ZP_04121613.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar pakistani str.
           T13001]
 gi|228799691|gb|EEM46643.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar pakistani str.
           T13001]
          Length = 252

 Score =  182 bits (462), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 67/262 (25%), Positives = 120/262 (45%), Gaps = 14/262 (5%)

Query: 4   VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + +WNVN +RA         +++E++ DI CLQE K ++       L+    +     
Sbjct: 1   MKLISWNVNGLRAVIAKGGFLEYLEESSADIFCLQEIKLQEGQIDLN-LEGYYTYWNYAV 59

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G AI SK +P+ +   L  ++ D + R I   F                 +    
Sbjct: 60  KKGYSGTAIFSKKEPLSVTYGLGIEEHDQEGRLITLEFEDFYMI-----TLYTPNSKRGL 114

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            + D ++ W   F  +  + L+ ++P+IF GD N+  +  D  NP     +  F+ E R+
Sbjct: 115 ERLDYRMKWEDDFRSYIKR-LDEKKPVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEERE 173

Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            F  +   GF D  R  +      YS+W Y   + +KN G R+D+ ++S      +  A+
Sbjct: 174 KFSCILEEGFIDTYRYLYPNQEGAYSWWSYRMGARAKNIGWRLDYFVVSERMKDQITEAK 233

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I+++  G    SDH PV + ++
Sbjct: 234 INSEVMG----SDHCPVELHIN 251


>gi|159906029|ref|YP_001549691.1| exodeoxyribonuclease III Xth [Methanococcus maripaludis C6]
 gi|159887522|gb|ABX02459.1| exodeoxyribonuclease III Xth [Methanococcus maripaludis C6]
          Length = 249

 Score =  182 bits (462), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 72/259 (27%), Positives = 119/259 (45%), Gaps = 12/259 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN IRA +      +++  +PDI+C+QETK +        L     +     +
Sbjct: 1   MKMISWNVNGIRACLKNGFMNFLERESPDIMCIQETKVQSGQVQL-GLDGYFQYWNYAER 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G A+ +K +P E++  +  ++ D + R I   F                 +    T
Sbjct: 60  KGYSGTAVFTKIKPNEVIYGIGNNEHDGEGRVITLKFDE-----YYLVNVYTPNSQRGLT 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           + + +  W + FL +    LE ++P+IF GD N+  +  D  NP     +A FT E R+ 
Sbjct: 115 RLEYRQKWDQDFLNYVKT-LENKKPVIFCGDLNVAHKEVDLKNPKTNVKNAGFTPEERKG 173

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F  + N GF D  R  +     YS+W Y  ++ ++N G RID+  +S      L  A I 
Sbjct: 174 FDNIVNSGFLDTFREFNKEPDNYSWWSYRFNARARNIGWRIDYFCISESLRGNLKDAFIM 233

Query: 243 TKPRGWTKPSDHTPVIVSL 261
            +  G    SDH PV +  
Sbjct: 234 PEIMG----SDHCPVGIIF 248


>gi|116625780|ref|YP_827936.1| exodeoxyribonuclease III [Candidatus Solibacter usitatus Ellin6076]
 gi|116228942|gb|ABJ87651.1| Exodeoxyribonuclease III [Candidatus Solibacter usitatus Ellin6076]
          Length = 258

 Score =  182 bits (462), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 85/259 (32%), Positives = 133/259 (51%), Gaps = 3/259 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+N+N+I  R++NL AW+    PD++CLQE K E + FP   L+ L Y     G++
Sbjct: 1   MKIATFNINNINKRLNNLTAWLSRAQPDVVCLQELKAEQRAFPASALRDLGYDGFWLGER 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           S+NGVAI ++                                + I +LYLP+GNP    K
Sbjct: 61  SWNGVAIFAR---ECTPVLTRSSLPGNPKDSQARYIEAAVNGVLIASLYLPNGNPQPGPK 117

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +D K++W +R +    + ++   P++ AGDYN++P   D Y     + +A    + RQ++
Sbjct: 118 FDYKLAWFQRLIEHGQELMKAGVPVVLAGDYNVVPTAQDIYPTRSLDKNALIQPQSRQAY 177

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            +L   G+TDA+R       L++FWDY    W   KG+R+DH +LSP  +  L    +D 
Sbjct: 178 ARLLAQGWTDALRTLQPEGPLWTFWDYERGRWPLGKGMRLDHFLLSPTVSDRLVDGGVDR 237

Query: 244 KPRGWTKPSDHTPVIVSLD 262
             RG    SDH P  + LD
Sbjct: 238 WVRGEENASDHAPAWIVLD 256


>gi|92115724|ref|YP_575453.1| exodeoxyribonuclease III (xth) [Nitrobacter hamburgensis X14]
 gi|91798618|gb|ABE60993.1| exodeoxyribonuclease III (xth) [Nitrobacter hamburgensis X14]
          Length = 293

 Score =  182 bits (462), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 74/269 (27%), Positives = 115/269 (42%), Gaps = 9/269 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62
           +T+ TWNVNS+R RI  +A ++K   PD++CLQETK  D  FP +  + L Y H+   GQ
Sbjct: 25  ITLTTWNVNSVRLRIDLVAKFLKAQRPDVLCLQETKCPDDAFPLKRFRRLGYEHVALNGQ 84

Query: 63  KSYNGVAILSKYQPIEIV-THLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT- 120
           K Y+GVA++SK                                 L + N Y+P G  I  
Sbjct: 85  KGYHGVAVVSKLPFDASNIRTFCDKIDSRHVGVTLGGEAGLAAPLVLHNFYVPAGGDIPD 144

Query: 121 ---STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
              + K+  K+ ++              +  +  GD N+ P  HD ++          T 
Sbjct: 145 PALNPKFAHKLQFLDEMKACTPLHPRDGDRHVLVGDLNVAPHEHDVWSHKQLLKIVSHTP 204

Query: 178 EVRQS--FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATS 234
              +     +        A      +  +Y++W Y A  W + N+G R+DHI +S     
Sbjct: 205 VECEKLLGLQSHGNWVDIARARIPMSEKVYTWWSYRAADWVAANRGRRLDHIWVSEALRG 264

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            +   RI    RGW +PSDH PV   +++
Sbjct: 265 GIRDFRITRAARGWERPSDHVPVTAVIEV 293


>gi|329120913|ref|ZP_08249545.1| exodeoxyribonuclease III [Dialister micraerophilus DSM 19965]
 gi|327471372|gb|EGF16823.1| exodeoxyribonuclease III [Dialister micraerophilus DSM 19965]
          Length = 254

 Score =  182 bits (462), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 72/264 (27%), Positives = 122/264 (46%), Gaps = 13/264 (4%)

Query: 1   MSVVTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           M+ +   +WNVN +RA I        K  N D  CLQETK +      + +     +  +
Sbjct: 1   MNNLKYISWNVNGLRACIKKGFLDSFKNLNADCFCLQETKLQPHQIELD-IPGYYQYWNS 59

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G A+ +K +PI +   +  ++ D + R I A F  +   +          +  
Sbjct: 60  AIKKGYSGTALFTKIKPISVSYGMNIEEHDQEGRLITAEFKNHFLVV-----CYTPNSQR 114

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              + + ++ W   F  +  + L   +P+I  GD N+  +  D  NP     +A FT + 
Sbjct: 115 QLARLEYRMKWENDFKNYLLK-LTESKPVILCGDLNVAHKEIDLANPSSNHKNAGFTDDE 173

Query: 180 RQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R+ F  L   GFTD  R  +      YS+W Y+A S  +N G RID+ ++S +  + +  
Sbjct: 174 RKKFSTLLENGFTDTFRYLYPDKKDAYSWWSYFAKSRERNIGWRIDYFLVSDKLKNKIKD 233

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
           A+I  + +G    SDH PV ++ D
Sbjct: 234 AKIHPEIQG----SDHCPVELTFD 253


>gi|292670448|ref|ZP_06603874.1| exodeoxyribonuclease III [Selenomonas noxia ATCC 43541]
 gi|292647858|gb|EFF65830.1| exodeoxyribonuclease III [Selenomonas noxia ATCC 43541]
          Length = 250

 Score =  182 bits (462), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 66/261 (25%), Positives = 108/261 (41%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +        KE N D+ CLQETK ++     + L     +  +  +
Sbjct: 1   MRFVSWNVNGLRAALKKGFMESFKELNADVFCLQETKMQEGQAILD-LPGYEQYFYSAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI ++ +P+ +   +  ++ D + R I                       +   
Sbjct: 60  KGYSGTAIFTRVKPLSVSYGIGIEEHDNEGRVITMELPDVYLVTVYTPNAKRALERLDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +   R     L  ++P++  GD N+     D  NP     +A FT E R  
Sbjct: 120 M------AWEDSFRAFLLDLRAKKPVVVCGDLNVAHTEIDLKNPKSNRRNAGFTDEERGK 173

Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L   GF D  RA +      Y++W Y   +   N G RID+ ++S E    + +A I
Sbjct: 174 FGELLAAGFVDTFRALYPDRTGAYTWWSYLRHARETNAGWRIDYFLVSAELRDRIAAAEI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            +   G    SDH PV ++L 
Sbjct: 234 HSDIFG----SDHCPVSLTLK 250


>gi|256419936|ref|YP_003120589.1| exodeoxyribonuclease III Xth [Chitinophaga pinensis DSM 2588]
 gi|256034844|gb|ACU58388.1| exodeoxyribonuclease III Xth [Chitinophaga pinensis DSM 2588]
          Length = 254

 Score =  182 bits (461), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 76/262 (29%), Positives = 120/262 (45%), Gaps = 12/262 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60
           + + ++NVN +R+ +      W+K +  DIICLQE K    N  ++  + L +  +    
Sbjct: 1   MRIVSYNVNGLRSAMNKGFTEWLKTDPADIICLQEIKAHKDNVDYKQFEELGFEHYWYPA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GVA+L+K  P  +         D + R I   F      + + N Y+P G    
Sbjct: 61  QKKGYSGVAVLTKITPDHVQYGNGFMQSDAEGRVIRLDFG----DITLINTYMPSG-TSG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   K  W++ F  +  Q       LI  GDYNI  +P D ++P+  +  + F  E R
Sbjct: 116 DERQTYKYQWLEEFYGYVDQLKATRPNLIICGDYNICHKPIDIHDPVGNKKSSGFLPEER 175

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
               KL + GF D  R  H   H YS+W    ++ + NKG RID+I ++      L  A 
Sbjct: 176 AWLDKLFSNGFVDTFRHYHPEPHQYSWWSVRTNARANNKGWRIDYISVTAPLQPKLKDAL 235

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I        K SDH P+ + L+
Sbjct: 236 IWPDV----KHSDHCPIYLQLE 253


>gi|255323252|ref|ZP_05364387.1| exodeoxyribonuclease III [Campylobacter showae RM3277]
 gi|255299775|gb|EET79057.1| exodeoxyribonuclease III [Campylobacter showae RM3277]
          Length = 256

 Score =  182 bits (461), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 65/262 (24%), Positives = 113/262 (43%), Gaps = 12/262 (4%)

Query: 4   VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA    +  AW+++  PD +  QE K  + + P E  + L ++  +   
Sbjct: 1   MKLISWNVNGLRAVAAKDGFAWLEQQKPDFLGFQEIKVRESDVPAEIYK-LGFNEISVNS 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
            +  G + +         T       D + R +E  F      + + N+Y P+G      
Sbjct: 60  AARAGYSGVMSLAKFSSATQKAAFFDDDEGRVLEHRFG----NVVLFNIYFPNGQ-KDDA 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +   K+ +  +FL +  + ++  + +IF GD N   +  D  NP      + F    R  
Sbjct: 115 RLAYKMDFYAKFLAYIQELVKQGKDVIFCGDVNTAHREIDLKNPKANAKTSGFLPIERAW 174

Query: 183 FQKLQNMGFTDAIRA-THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             ++   GF D  R    D    YS+W Y  ++ +KN G RID+  +S      L  A I
Sbjct: 175 LDEVVACGFIDTFRHVRGDAADAYSWWSYRFNARAKNVGWRIDYFFISSSLKDRLKDAFI 234

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
            +   G    SDH PV + +D+
Sbjct: 235 LSDITG----SDHCPVGIEIDL 252


>gi|260592674|ref|ZP_05858132.1| exodeoxyribonuclease III [Prevotella veroralis F0319]
 gi|260535444|gb|EEX18061.1| exodeoxyribonuclease III [Prevotella veroralis F0319]
          Length = 249

 Score =  182 bits (461), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 69/260 (26%), Positives = 113/260 (43%), Gaps = 12/260 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +  +     K+ N D  CLQETK +              +     +
Sbjct: 1   MKLISWNVNGLRACVGKDFEQQFKDFNADFFCLQETKMQAGQLDLS-FPGYESYWNYADK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI ++++P+ +   +  D+ D + R I            +  +Y P+       
Sbjct: 60  KGYSGTAIFTRHKPLSVTYGIDIDEHDHEGRVITLEMD----DFYLVTVYTPNSQDELRR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
              +     +   +    +L+  +P+I  GD N+  Q  D  NP     +A FT E RQ 
Sbjct: 116 L--EYRMKWEDDFQSYLHKLDEIKPVIVCGDMNVAHQEIDLKNPKTNRRNAGFTDEERQK 173

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
             +L + GF D  R  +     YS+W Y   +  KN G RID+ ++S      L  A+I 
Sbjct: 174 MTQLLSNGFIDTFRTLYPEQVTYSWWSYRFRAREKNTGWRIDYFLISERLRDRLVDAKIH 233

Query: 243 TKPRGWTKPSDHTPVIVSLD 262
           T+  G    SDH P+ + L 
Sbjct: 234 TEIMG----SDHCPIEIDLK 249


>gi|227552171|ref|ZP_03982220.1| exodeoxyribonuclease III [Enterococcus faecium TX1330]
 gi|257892875|ref|ZP_05672528.1| exodeoxyribonuclease [Enterococcus faecium 1,231,408]
 gi|227178703|gb|EEI59675.1| exodeoxyribonuclease III [Enterococcus faecium TX1330]
 gi|257829254|gb|EEV55861.1| exodeoxyribonuclease [Enterococcus faecium 1,231,408]
          Length = 269

 Score =  182 bits (461), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 70/262 (26%), Positives = 113/262 (43%), Gaps = 13/262 (4%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++   +WNVN +RA +  N      E + D  CLQETK +      + L     +     
Sbjct: 19  LLKFISWNVNGLRAIVNKNFLEVFHELDADFFCLQETKLQAGQIDLD-LPGYYQYWNYAE 77

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G AI +K   +     +  D  D + R I   ++                +    
Sbjct: 78  RKGYSGTAIFAKEPALNATYGMGIDIHDTEGRLITLEYSDF-----FLVTCYTPNSQSEL 132

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            + D ++ W + F  +    L+ ++P+I  GD N+  Q  D  N    + +A FT E R 
Sbjct: 133 KRLDYRLEWEEAFYNYLEN-LKKQKPVIVCGDLNVAHQTIDLKNWKTNQKNAGFTPEERA 191

Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           +  +L + GF D  R  +     +YS+W+Y  +S   N G RID+ + S +    L  A+
Sbjct: 192 ALSRLLDNGFIDTFRYFYPTQEGVYSWWNYRFNSRKNNAGWRIDYFLTSKDLAPRLADAK 251

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I T   G    SDH PV + L 
Sbjct: 252 IHTDIMG----SDHCPVELDLK 269


>gi|160915303|ref|ZP_02077516.1| hypothetical protein EUBDOL_01312 [Eubacterium dolichum DSM 3991]
 gi|158433102|gb|EDP11391.1| hypothetical protein EUBDOL_01312 [Eubacterium dolichum DSM 3991]
          Length = 252

 Score =  182 bits (461), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 71/261 (27%), Positives = 115/261 (44%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN IRA +      + +  + DI C+QETK +      ET      ++ +  +
Sbjct: 1   MKLVSWNVNGIRACMKKGFMDFFQAIDADIFCIQETKMQPGQLEIET-DGYVQYMNSADK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+GV + SK +P+ +   L  D+ D + R I   +                   +   
Sbjct: 60  KGYSGVMVFSKKEPLSVSYGLGIDEHDHEGRVITCEYDTFYLVCVYTPNSKDGLLRLDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +   R   QRL+  + ++  GD N+  Q  D  NP     +A FT E R+ 
Sbjct: 120 MQ------WEDAFRAYLQRLKESKSVVVCGDLNVAHQEIDLKNPKTNRRNAGFTDEEREK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
              L + GF D+ R  +    ++YS+W Y   +  KN G RID+ ++S +A   +  A+I
Sbjct: 174 MTTLLSSGFVDSYRYLYPDKENVYSWWSYRFSAREKNAGWRIDYFLVSEDAKERIEEAQI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            T   G    SDH PV +S  
Sbjct: 234 HTDIYG----SDHCPVSLSFK 250


>gi|257460806|ref|ZP_05625907.1| exodeoxyribonuclease III [Campylobacter gracilis RM3268]
 gi|257442137|gb|EEV17279.1| exodeoxyribonuclease III [Campylobacter gracilis RM3268]
          Length = 252

 Score =  182 bits (461), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 65/262 (24%), Positives = 104/262 (39%), Gaps = 12/262 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +  +  AW+ E NPD + LQE K  +K+ P    + L +   +   
Sbjct: 1   MKLISWNVNGLRAVLGKDGFAWLAEQNPDFLGLQEIKVSEKDAPKGLYE-LGF---SQID 56

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
            +    A  S    +          L                 +     +          
Sbjct: 57  LNSAARAGYSGVASLAKFKSETSKALFFPDDEGRVLQHRFGDVVLFNIYFPN--GQKDEA 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +   K+ +  +FL +A    E    +IF GD N   +  D  NP      + F    R  
Sbjct: 115 RLAYKMEFYAKFLAYARSLAEQGLGVIFCGDVNTAHREIDLANPKANSKTSGFLPIERAW 174

Query: 183 FQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             +++  GF D  RA H +    YS+W Y  ++ +KN G RID+  +S    S L  A I
Sbjct: 175 LDEVEAAGFVDTFRAVHGELRDAYSWWSYRFNARAKNVGWRIDYFFISANLRSQLKDAFI 234

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
            +   G    SDH PV + ++I
Sbjct: 235 LSDVMG----SDHCPVGIEIEI 252


>gi|86750015|ref|YP_486511.1| exodeoxyribonuclease III [Rhodopseudomonas palustris HaA2]
 gi|86573043|gb|ABD07600.1| exodeoxyribonuclease III [Rhodopseudomonas palustris HaA2]
          Length = 284

 Score =  182 bits (461), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 90/259 (34%), Positives = 136/259 (52%), Gaps = 2/259 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+NVN++  R+  L  W+K   PDI+CLQE K    +FP   L    Y     GQK
Sbjct: 28  LKIATFNVNNVNKRLPVLLGWLKAAKPDIVCLQELKAAQDDFPEAALLKAGYSAAWVGQK 87

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           ++NGVAIL++ +   +VT           +       +      +G LY P+GNP    K
Sbjct: 88  TWNGVAILARKRAEIVVTRRALPGDAKDLQSRYLEAAVAGMI--VGCLYAPNGNPQPGPK 145

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K++W+KR  R A++ L+   P++ AGD+N++P P D Y    W+ DA    E R  F
Sbjct: 146 FQYKLAWMKRLNRHAAKLLKSGVPVVLAGDFNVVPTPADIYPTRSWDKDALLQPEPRALF 205

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             L   G+TDA+RA H     Y+FW Y+ + + ++ G+RIDH++L P +   L    +D 
Sbjct: 206 AALLKQGWTDALRALHPEQAPYTFWTYWRNRFERDHGLRIDHLLLDPASAQRLARGGVDR 265

Query: 244 KPRGWTKPSDHTPVIVSLD 262
             RG    SDH P  + L 
Sbjct: 266 AIRGAPDASDHAPAWIVLK 284


>gi|294629849|ref|ZP_06708409.1| exodeoxyribonuclease III [Streptomyces sp. e14]
 gi|292833182|gb|EFF91531.1| exodeoxyribonuclease III [Streptomyces sp. e14]
          Length = 267

 Score =  182 bits (461), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 54/268 (20%), Positives = 99/268 (36%), Gaps = 8/268 (2%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++TV + NVN +RA        W+     D++CLQE + E +  P +      +H+    
Sbjct: 1   MLTVTSVNVNGLRAAAKKGFVEWLARTGADVLCLQEVRAEPQQLPEQVRAPEGWHVTHAP 60

Query: 62  Q--KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
              K   GV++ ++ +P  +       + D   R++EA     T    +       G   
Sbjct: 61  AAAKGRAGVSLYTRREPDRVRVGFGSTEFDGSGRYVEADLPGVTVA-SLYLPSGEVGTER 119

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K      ++        +       ++  GD+NI  Q  D  N      ++ F  E 
Sbjct: 120 QDEKVRFMGEFLAYLKELRERAAADGREVLVCGDWNIAHQRADLKNWRGNLKNSGFLPEE 179

Query: 180 RQSFQKL----QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
           R+   ++                 D    YS+W Y   ++  + G RID+ + +P   + 
Sbjct: 180 REWLTQVLTPEAGGYVDVVRALHPDVEGPYSWWSYRGRAFDNDTGWRIDYHVSTPGLAAK 239

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                ++       + SDH PV V  D+
Sbjct: 240 AVKGFVERAATHAERWSDHAPVTVVYDL 267


>gi|258512235|ref|YP_003185669.1| exodeoxyribonuclease III Xth [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
 gi|257478961|gb|ACV59280.1| exodeoxyribonuclease III Xth [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
          Length = 252

 Score =  182 bits (461), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 60/263 (22%), Positives = 108/263 (41%), Gaps = 14/263 (5%)

Query: 4   VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           +   +WNVN +RA ++      + +  + D+ C+QETK +         ++         
Sbjct: 1   MRFVSWNVNGLRACVNKGAFLPYFESADADVFCIQETKLQAGQIELPIGEAYQQFWNYAE 60

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G A+ ++  P+++       +            +    T+   N           
Sbjct: 61  RKGYSGTAVFTRITPLDVRYGFGDGNDPEGRIITLEFPSFYVVTVYTPNA------KRDL 114

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
           ++   ++ W   F  +    L+ E+P+I  GD N+  +  D  N      ++ FT E R 
Sbjct: 115 SRLPYRLEWEDAFCAY-LCALDREKPVIACGDLNVAHEEIDIKNAKSNRGNSGFTDEERA 173

Query: 182 SFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
              +L   GF D  RA H      Y++W        +N G RID+ ++S      +  AR
Sbjct: 174 KMTELLAAGFVDTFRALHPNVTDKYTWWSNMPGVRERNIGWRIDYFLVSERLRDRILDAR 233

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263
           ID    G    SDH PV++ +D+
Sbjct: 234 IDDHVLG----SDHCPVVLEVDL 252


>gi|225016166|ref|ZP_03705370.1| hypothetical protein CLOSTMETH_00081 [Clostridium methylpentosum
           DSM 5476]
 gi|224951039|gb|EEG32248.1| hypothetical protein CLOSTMETH_00081 [Clostridium methylpentosum
           DSM 5476]
          Length = 253

 Score =  182 bits (461), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 60/258 (23%), Positives = 111/258 (43%), Gaps = 13/258 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      + +E + D+ C+QETK +        L+       +  +
Sbjct: 1   MKLISWNVNGLRACLNKGFLDFFQEADADVFCVQETKMQQGQAEL-ALEGYEQFWCSAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G A+ ++  P+ +   +   + D + R I   F        + N+Y P+     + 
Sbjct: 60  KGYSGTAVFTRIPPVSVAYGIGIPEFDTEGRVITVEFE----KFTLINVYTPNAQRGLTR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
              D     +   R    RL+  +P++  GD N+     D  N      +A F+ E R  
Sbjct: 116 I--DFRMQWEDAFRVYLLRLQESKPVVVCGDLNVAHNEIDLKNYKTNRGNAGFSDEERGK 173

Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             +L   G TD+ R  +      Y++W Y  ++ + N G RID+ + S      +  + I
Sbjct: 174 MTELLQSGLTDSFRYLYPEKTGCYTWWSYMFNARANNAGWRIDYFLTSDVLKDQIEDSVI 233

Query: 242 DTKPRGWTKPSDHTPVIV 259
            ++  G    SDH P+ +
Sbjct: 234 YSEVLG----SDHCPIGL 247


>gi|188583700|ref|YP_001927145.1| exodeoxyribonuclease III Xth [Methylobacterium populi BJ001]
 gi|179347198|gb|ACB82610.1| exodeoxyribonuclease III Xth [Methylobacterium populi BJ001]
          Length = 269

 Score =  182 bits (461), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 76/268 (28%), Positives = 128/268 (47%), Gaps = 9/268 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62
           +TV TWN+NS+R RI ++  +++E  PD++CLQETK  D+ FP +  +   Y +I   GQ
Sbjct: 3   LTVTTWNINSVRLRIESVLRFLREEQPDVLCLQETKCPDELFPLKAFKGSGYENIVFAGQ 62

Query: 63  KSYNGVAILSKYQ--PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           K YNGVAI+S++     +++      D    +  +          + + + Y+P G  + 
Sbjct: 63  KGYNGVAIVSRFPLLTRDVMRFCERADARHISAVLGPE-AGPAAGIVLHDFYVPAGGDVP 121

Query: 121 STKYDDKISWIKRFLRFASQR--LELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
               + K +    FL          +  P I  GD N+ P  HD ++     +    T  
Sbjct: 122 HRDLNPKFAHKLDFLSELRAWGGRRVSGPAILVGDLNVAPLEHDVWSHKQLLDVVSHTPV 181

Query: 179 VRQS--FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSL 235
             ++    + +      A   T +   +Y++W Y + +W   NKG R+DH  +SP+    
Sbjct: 182 ETEALETLRGEAGWIDAARLLTPEPEKIYTWWSYRSPNWELANKGRRLDHAWVSPDLAGT 241

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +    +    RGW KPSDH PV +SL++
Sbjct: 242 VRKVAVFHAARGWEKPSDHVPVTLSLEL 269


>gi|51598785|ref|YP_072973.1| exodeoxyribonuclease III [Borrelia garinii PBi]
 gi|51573356|gb|AAU07381.1| exodeoxyribonuclease III [Borrelia garinii PBi]
          Length = 255

 Score =  182 bits (461), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 58/260 (22%), Positives = 103/260 (39%), Gaps = 12/260 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCG 61
           + + +WNVN IRA +      ++KE  PDI+C+QETK   +  P + +    Y +     
Sbjct: 1   MKLISWNVNGIRAVLKKGFLEFVKEYTPDILCVQETKALKEQLPRDLILENYYSYFSKSK 60

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
            K Y+GV I SK +PI +         +     I            +        +    
Sbjct: 61  IKGYSGVCIYSKVKPISVNLLGKEIFDNEGRGLIAYYDNF------VLINGYFPNSQALR 114

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            +   K++++          +   + ++  GD+NI     D  +P    +   + +E   
Sbjct: 115 RRLVYKLNFLSYVENLIDSLVNGGKNVVICGDFNIAHTKIDLISPDSNRDSPGYYIEETT 174

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
                 N G+ D  R  +     Y++W Y   +  +N G RID+ +++      +  + I
Sbjct: 175 WLDSFLNKGYVDTFRIFNKEPGYYTWWSYRTRARERNMGWRIDYFVVNEFFKRNVKKSLI 234

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
             K  G    SDH PV + L
Sbjct: 235 LDKVMG----SDHCPVFLEL 250


>gi|294669077|ref|ZP_06734163.1| exodeoxyribonuclease III [Neisseria elongata subsp. glycolytica
           ATCC 29315]
 gi|291309069|gb|EFE50312.1| exodeoxyribonuclease III [Neisseria elongata subsp. glycolytica
           ATCC 29315]
          Length = 300

 Score =  182 bits (461), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 61/265 (23%), Positives = 114/265 (43%), Gaps = 13/265 (4%)

Query: 2   SVVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           +++ + + NVN IR+        +I  +  DIIC+QE K ++ +   E       H    
Sbjct: 42  NMLKIISANVNGIRSAYKKGFYEYIAASGADIICVQELKAQEADLSDEMKNPHGMHGHWH 101

Query: 61  G--QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
              ++ Y+GVA+ SK  P  +   +  ++ D + RF+   F   +               
Sbjct: 102 CAEKRGYSGVAVYSKRAPDNVQIGMGIEEFDREGRFVRCDFGKLSVI-----SLYLPSGT 156

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
               + + K  ++  F             ++  GD+NI  Q  D  N    + ++ F  E
Sbjct: 157 SAPERQELKYRFLDAFYPMLEAMKAEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPE 216

Query: 179 VRQSF-QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
            R+   + +  +G+TD  R  +  +  Y++W     +++K+ G RID+ M++PE  +   
Sbjct: 217 EREWIGKVIHTLGWTDMWRTLYPDNPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAV 276

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLD 262
           SA +        K SDH P++V  D
Sbjct: 277 SAHVYKD----EKFSDHAPLVVEYD 297


>gi|288803025|ref|ZP_06408461.1| exodeoxyribonuclease III [Prevotella melaninogenica D18]
 gi|288334542|gb|EFC72981.1| exodeoxyribonuclease III [Prevotella melaninogenica D18]
          Length = 249

 Score =  182 bits (461), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 68/260 (26%), Positives = 111/260 (42%), Gaps = 12/260 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +        K+ + D  CLQETK +              +     +
Sbjct: 1   MKFISWNVNGLRACVGKEFEQQFKDLDADFFCLQETKMQAGQLDIS-FLGYESYWNYADK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K++P+ +   +  D+ D + R I      +   + +       G      
Sbjct: 60  KGYSGTAIFTKHKPLSVTYGINIDEHDHEGRVITLEMD-DFYLVTVYTPNSQDGLRRLDY 118

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +        +   +    +L+ ++P+I  GD N+  Q  D  NP     +A FT E R+ 
Sbjct: 119 R-----MKWEDDFQAYLHKLDEKKPVIVCGDMNVAHQEIDLKNPKTNRKNAGFTDEEREK 173

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
             +L + GF D  R  +     YS+W Y   +  KN G RID+ ++S      L  A+I 
Sbjct: 174 MTQLLSNGFIDTFRTLYPEQVTYSWWSYRFRAREKNTGWRIDYFLISERLKDRLEDAKIH 233

Query: 243 TKPRGWTKPSDHTPVIVSLD 262
           T+  G    SDH PV + L 
Sbjct: 234 TEIMG----SDHCPVEIILK 249


>gi|229162671|ref|ZP_04290628.1| Exodeoxyribonuclease [Bacillus cereus R309803]
 gi|228620553|gb|EEK77422.1| Exodeoxyribonuclease [Bacillus cereus R309803]
          Length = 252

 Score =  182 bits (461), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 69/259 (26%), Positives = 119/259 (45%), Gaps = 14/259 (5%)

Query: 4   VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + +WNVN +RA         +++E+N DI CLQE K +D       L+    +     
Sbjct: 1   MKLISWNVNGLRAVIAKGGFLEYLEESNADIFCLQEIKLQDGQIDLN-LEGYYTYWNYAV 59

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G AI SK +P+ +   L  ++ D + R I   F                 +    
Sbjct: 60  KKGYSGTAIFSKKEPLSVTYGLGIEEHDQEGRVITLEFEDFHMI-----TLYTPNSKRGL 114

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            + D ++ W   F  +  + L+ ++P+IF GD N+  +  D  NP     +  F+ E R+
Sbjct: 115 ERLDYRMKWEDDFRAYIKR-LDEKKPVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEERE 173

Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            F  +   GF D  R  +      YS+W Y   + +KN G R+D+ ++S    + +  A+
Sbjct: 174 KFTCVLEEGFIDTYRYLYPDQKGAYSWWSYRMGARAKNIGWRLDYFVVSERMKNQITEAK 233

Query: 241 IDTKPRGWTKPSDHTPVIV 259
           I+++  G    SDH PV +
Sbjct: 234 INSEVMG----SDHCPVEL 248


>gi|167748893|ref|ZP_02421020.1| hypothetical protein ANACAC_03667 [Anaerostipes caccae DSM 14662]
 gi|317470265|ref|ZP_07929659.1| exodeoxyribonuclease III [Anaerostipes sp. 3_2_56FAA]
 gi|167651863|gb|EDR95992.1| hypothetical protein ANACAC_03667 [Anaerostipes caccae DSM 14662]
 gi|316902238|gb|EFV24158.1| exodeoxyribonuclease III [Anaerostipes sp. 3_2_56FAA]
          Length = 251

 Score =  182 bits (461), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 72/262 (27%), Positives = 113/262 (43%), Gaps = 13/262 (4%)

Query: 3   VVTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++ + +WNVN +RA +       +++ + DI C+QETK ++     E L     +     
Sbjct: 1   MIQLVSWNVNGLRACVKKGFLDVMEQLDADIFCIQETKLQEGQIDLE-LPDYYQYWNYAE 59

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G A+ +K +P+ +   +  D+ D + R I   F        +        + +  
Sbjct: 60  KKGYSGTAVFTKIKPLSVKNGIGVDEFDHEGRVITLEF---DDYFLVTCYTPNSQSELAR 116

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
             Y        R       +LE ++P+I  GD N+     D  NP     +A FT E R+
Sbjct: 117 LSYRMDWEENFREY---LLKLEEDKPVILCGDLNVAHTEIDLKNPKTNRKNAGFTDEERE 173

Query: 182 SFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            F KL   GF D  R  +      YS+W Y   +  KN G RID+  +S      L  A 
Sbjct: 174 KFTKLLEAGFIDTFRHFYPDVTEAYSWWSYRFRAREKNAGWRIDYFCVSEGLEERLAEAV 233

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I T   G    SDH PV + L+
Sbjct: 234 IHTDIYG----SDHCPVGLYLE 251


>gi|332169669|gb|AEE18924.1| exodeoxyribonuclease III Xth [Krokinobacter diaphorus 4H-3-7-5]
          Length = 254

 Score =  182 bits (461), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 73/264 (27%), Positives = 129/264 (48%), Gaps = 13/264 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60
           + + ++NVN IRA +  + A W++  +PD++ LQETK           +SL Y  +  + 
Sbjct: 1   MKIISYNVNGIRAALRKDFATWLQHTDPDVVLLQETKATPDQVDTAVFESLGYEHYWFSA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GVAIL+K  P  +V     + +D + R I   F      + + ++YLP G  I 
Sbjct: 61  QKKGYSGVAILTKKTPKNVVYGTGIESMDFEGRNIRVDFD----DVSVMSMYLPSGTNIA 116

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
               + K+ ++     + ++  +    L+  GDYNI  +  D ++P+  +N + F    R
Sbjct: 117 R--LEHKLEYMSLLQDYVNKIKQDVPNLVIGGDYNICHEAIDIHDPVRNKNVSGFLPVER 174

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           +      + GF D+ R  +     Y++W Y A++ + NKG RID+ M+S    + +  A 
Sbjct: 175 EWISNFMDSGFIDSFRHLNKEPDNYTWWSYRANARANNKGWRIDYNMVSEPLKNNIERAV 234

Query: 241 IDTKPRGWTKPSDHTPVIVSLDIP 264
           I +        SDH P +V L + 
Sbjct: 235 ILSDA----VHSDHCPHMVELKLS 254


>gi|160947302|ref|ZP_02094469.1| hypothetical protein PEPMIC_01235 [Parvimonas micra ATCC 33270]
 gi|158446436|gb|EDP23431.1| hypothetical protein PEPMIC_01235 [Parvimonas micra ATCC 33270]
          Length = 250

 Score =  182 bits (461), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 69/261 (26%), Positives = 110/261 (42%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA I      +  E N D  CLQE K  +     E L+          +
Sbjct: 1   MRFISWNVNGLRACIKKGFLDYFNEINADFFCLQEIKMSEGQLDLE-LEGYETFYNYAQR 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K++P+ +   +  ++ D + R I   +                 +     
Sbjct: 60  KGYSGTAIFTKFKPLSVKYGMGMEEHDNEGRLITLEYDDF-----FLVTCYTPNSKQELL 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           + D ++ W   F  +    L   + +I  GD N+  +  D  NP     +A FT E R+ 
Sbjct: 115 RLDYRMVWEDAFRNYLLD-LNKTKSVIVCGDLNVAHKEIDLKNPKTNRKNAGFTDEEREK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
              L + GFTD  R  +    + YS+W Y+  S  +N G RID+ + S +    L  A+I
Sbjct: 174 MSILLDSGFTDTFRYFYPDKENEYSWWSYFGKSRERNTGWRIDYFLTSKDMDDRLVDAQI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
                G    SDH PV + + 
Sbjct: 234 HQSILG----SDHCPVYLEIK 250


>gi|30021833|ref|NP_833464.1| exodeoxyribonuclease III [Bacillus cereus ATCC 14579]
 gi|229129016|ref|ZP_04257989.1| Exodeoxyribonuclease [Bacillus cereus BDRD-Cer4]
 gi|29897389|gb|AAP10665.1| Exodeoxyribonuclease III [Bacillus cereus ATCC 14579]
 gi|228654253|gb|EEL10118.1| Exodeoxyribonuclease [Bacillus cereus BDRD-Cer4]
          Length = 252

 Score =  182 bits (461), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 67/262 (25%), Positives = 120/262 (45%), Gaps = 14/262 (5%)

Query: 4   VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + +WNVN +RA         +++E++ DI CLQE K ++       L+    +     
Sbjct: 1   MKLISWNVNGLRAVIAKGGFLEYLEESSADIFCLQEIKLQEGQIDLN-LEGYYTYWNYAV 59

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G AI SK +P+ +   L  ++ D + R I   F                 +    
Sbjct: 60  KKGYSGTAIFSKKEPLSVTYGLGIEEHDQEGRLITLEFEDFYMI-----TLYTPNSKRGL 114

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            + D ++ W   F  +  + L+ ++P+IF GD N+  +  D  NP     +  F+ E R+
Sbjct: 115 ERLDYRMKWEDDFRSYIKR-LDEKKPVIFCGDLNVAHKEIDLKNPKSNRENPGFSDEERE 173

Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            F  +   GF D  R  +      YS+W Y   + +KN G R+D+ ++S      +  A+
Sbjct: 174 KFSCILEEGFIDTYRYLYPNQEGAYSWWSYRMGARAKNIGWRLDYFVVSEGMKDQITEAK 233

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I+++  G    SDH PV + ++
Sbjct: 234 INSEVMG----SDHCPVELHIN 251


>gi|20808602|ref|NP_623773.1| exonuclease III [Thermoanaerobacter tengcongensis MB4]
 gi|20517232|gb|AAM25377.1| Exonuclease III [Thermoanaerobacter tengcongensis MB4]
          Length = 258

 Score =  182 bits (461), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 68/260 (26%), Positives = 118/260 (45%), Gaps = 14/260 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + +WNVN +RA +      + K  + DI C+QETK ++     E L    Y+      
Sbjct: 1   MKLVSWNVNGLRACLQKGFMDYFKAIDADIFCIQETKLQENQKDIEGLDLNGYYAFWNFA 60

Query: 62  -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+G A+ +KY+P+ +   +     D + R I   +                 +   
Sbjct: 61  EKKGYSGTAVFTKYKPLSVSYGIGTPHHDKEGRVITLEYKKF-----FLVNAYTPNSQRG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
            T+ + ++ W + F  +  + L+  +P+I  GD N+  Q  D  NP     +A FT E R
Sbjct: 116 LTRLNYRMEWEEDFRSYLLK-LDSVKPVILCGDLNVAHQEIDIKNPAANRRNAGFTDEER 174

Query: 181 QSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           +    L N GF D  R  +      Y++W Y  ++  KN G R+D+ ++S      L  +
Sbjct: 175 EKMTILLNSGFIDTFRYFYPDKKDAYTWWSYMHNAREKNIGWRVDYFIVSERLKDYLIDS 234

Query: 240 RIDTKPRGWTKPSDHTPVIV 259
           +I ++  G    SDH PV++
Sbjct: 235 QIHSEVMG----SDHCPVVL 250


>gi|78067925|ref|YP_370694.1| exodeoxyribonuclease III xth [Burkholderia sp. 383]
 gi|77968670|gb|ABB10050.1| Exodeoxyribonuclease III xth [Burkholderia sp. 383]
          Length = 257

 Score =  182 bits (461), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 61/264 (23%), Positives = 113/264 (42%), Gaps = 14/264 (5%)

Query: 3   VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59
           ++ V T N+N IR A       W+ E N D +C+QE K    + P E ++   +  +   
Sbjct: 1   MMRVITANLNGIRSAAKKGFFEWLGEQNADCVCVQEIKVSADDLPAEFVEPHGFKSYFHH 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G  + S+ +P +++      + D + R++EA +      L + ++Y+P G+  
Sbjct: 61  AEKKGYSGAGVYSRREPDDVIIGFGSSEFDAEGRYVEARYG----KLSVVSVYVPSGSSG 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +                  L+ +  +I  GD NI+ +  D  N    + ++    E 
Sbjct: 117 EERQQA--KYRFMDEFMPHLAALKKKREVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEE 174

Query: 180 RQSFQK-LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R+   K   ++G+ D  R        Y++W     +++KN G RID+ + +P       S
Sbjct: 175 REWLTKLFDDVGYVDVFRTLDPRAEQYTWWSNRGQAYAKNVGWRIDYQIATPGVAGTAKS 234

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
             I        K SDH P+ +  D
Sbjct: 235 TSIFKDI----KFSDHAPLTIDYD 254


>gi|242277753|ref|YP_002989882.1| exodeoxyribonuclease III [Desulfovibrio salexigens DSM 2638]
 gi|242120647|gb|ACS78343.1| exodeoxyribonuclease III [Desulfovibrio salexigens DSM 2638]
          Length = 255

 Score =  182 bits (461), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 60/262 (22%), Positives = 105/262 (40%), Gaps = 8/262 (3%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN  RA I  N   W +++N D++ +QETK      P +      Y       
Sbjct: 1   MKIYSWNVNGYRAVIKKNFNEWFEQSNADVVMIQETKAHPDQIPDKNRNIEGYESLWNWS 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K   G +  + +    +++H  G   +           +  +   + N+Y P+G      
Sbjct: 61  KVKKGYSGTACFTRQPVLSHSFGLTDEKYQGEGRV-VLMEYEQFYLFNIYYPNGQMSDER 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
              +            ++ L  ++P++  GD+N   +  D  NP      + F    R  
Sbjct: 120 L--EYKMGFYDSFLEYAEELRKKKPIVVGGDFNTAHKEIDLKNPKANSERSGFLPIERAW 177

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
             K    G+ D  R   D+   YS+W Y  ++   N G RID+  +S E    + +A I+
Sbjct: 178 LDKFIEHGYVDTFRMFDDSPGKYSWWSYRFNARKNNAGWRIDYFFVSEELKHNVKNAWIE 237

Query: 243 TKPRGWTKPSDHTPVIVSLDIP 264
           +   G    SDH P+ + L  P
Sbjct: 238 SDIMG----SDHCPIGIELSFP 255


>gi|163941424|ref|YP_001646308.1| exodeoxyribonuclease III Xth [Bacillus weihenstephanensis KBAB4]
 gi|229012920|ref|ZP_04170085.1| Exodeoxyribonuclease [Bacillus mycoides DSM 2048]
 gi|163863621|gb|ABY44680.1| exodeoxyribonuclease III Xth [Bacillus weihenstephanensis KBAB4]
 gi|228748174|gb|EEL98034.1| Exodeoxyribonuclease [Bacillus mycoides DSM 2048]
          Length = 252

 Score =  181 bits (460), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 65/262 (24%), Positives = 116/262 (44%), Gaps = 14/262 (5%)

Query: 4   VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + +WNVN +RA         +++E+N DI CLQE K +         +    +     
Sbjct: 1   MKLISWNVNGLRAVIAKGGFLEYLEESNADIFCLQEIKLQSGQIDLNP-EGYYTYWNYAV 59

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G AI +K +PI +   L  ++ D + R I   F                 +    
Sbjct: 60  KKGYSGTAIFTKKEPISVTYGLGIEEHDQEGRVITLEFEDFYMI-----TLYTPNSKRGL 114

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            + D ++ W   F  +  + L  ++ ++F GD N+  +  D  NP     +  F+ E R+
Sbjct: 115 ERLDYRMKWEDDFRAYIKR-LNEKKSVVFCGDLNVAHKEIDLKNPKSNRKNPGFSDEERE 173

Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            F +    GF D  R  +      YS+W Y   + +KN G R+D+ ++S      +  A+
Sbjct: 174 KFTRTLEEGFVDTYRYLYPDQEGAYSWWSYRMGARAKNIGWRLDYFVVSERMKDKITEAK 233

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I+++  G    SDH PV + ++
Sbjct: 234 INSEIMG----SDHCPVELHIN 251


>gi|291439108|ref|ZP_06578498.1| exodeoxyribonuclease [Streptomyces ghanaensis ATCC 14672]
 gi|291342003|gb|EFE68959.1| exodeoxyribonuclease [Streptomyces ghanaensis ATCC 14672]
          Length = 273

 Score =  181 bits (460), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 54/267 (20%), Positives = 98/267 (36%), Gaps = 8/267 (2%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++TV + NVN +RA        W+ +   D +CLQE + E +  P +  +   +H+    
Sbjct: 8   MLTVTSVNVNGLRAAAKKGFVEWLAQTPADALCLQEVRAEPQQLPEQVREPEGWHVVHAP 67

Query: 62  Q--KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
              K   GV++ ++ +P  +       + D   R++EA     T    +       G   
Sbjct: 68  AAAKGRAGVSLYTRREPDRVQVGFGSTEFDGSGRYVEADLPGVTVA-SLYLPSGEVGTER 126

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K      ++        +       ++  GD+NI  +  D  N      ++ F  E 
Sbjct: 127 QEEKVRFMGEFLAYLKELRERAAGEGREVVVCGDWNIAHEKADLKNWRGNTKNSGFLPEE 186

Query: 180 RQSF----QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
           R+                  +   D    YS+W Y   ++  + G RID+ M +P     
Sbjct: 187 REWLSRVLTPTDGGYVDVVRKLHPDVDGPYSWWSYRGRAFDNDTGWRIDYQMATPGLAER 246

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262
              A ++       + SDH PV V  +
Sbjct: 247 AVEAYVERAATHAERWSDHAPVTVVFE 273


>gi|25029135|ref|NP_739189.1| putative exodeoxyribonuclease III [Corynebacterium efficiens
           YS-314]
 gi|259505870|ref|ZP_05748772.1| exodeoxyribonuclease III [Corynebacterium efficiens YS-314]
 gi|23494422|dbj|BAC19389.1| putative exodeoxyribonuclease III [Corynebacterium efficiens
           YS-314]
 gi|259166544|gb|EEW51098.1| exodeoxyribonuclease III [Corynebacterium efficiens YS-314]
          Length = 261

 Score =  181 bits (460), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 75/267 (28%), Positives = 123/267 (46%), Gaps = 13/267 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +  WNVNS R R+  +  ++  ++ D++ +QETK  D  FP+E  + + Y +   G  
Sbjct: 1   MRIVNWNVNSARTRVDRMVDFLIRHDVDVLAVQETKCRDDQFPYERFREIGYEVAHFGLS 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQAR-----FIEATFTINTQTLRIGNLYLPHGNP 118
            +NGVAI+S+    ++ T  PG     +                   +R+ +LY+P+G  
Sbjct: 61  QWNGVAIISRVGIEDVQTSFPGQPGFDKDPGAEQAIEARAIGAGCGGVRVWSLYVPNGRE 120

Query: 119 ITSTKYDDKISWIKRFLRFASQRL--ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
           I    YD K+ W+       +  L    EE +I  GD+NI P   D ++   +E     T
Sbjct: 121 IADPHYDYKLRWLFALRNHVADVLRANPEEKMILLGDFNIAPTDQDVWDISAFEGHTHVT 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
              R +FQ+L   G T+           +++WDY    + K +G+RID  + +P  T   
Sbjct: 181 EPERAAFQQLIEAGLTETS----PGPGTFTYWDYKGARFLKGEGMRIDFQLATPALT--A 234

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263
               +D + RG    SDH PVIV   +
Sbjct: 235 DHTFVDVEERGGKGASDHAPVIVDYSV 261


>gi|118475279|ref|YP_892840.1| exodeoxyribonuclease III [Campylobacter fetus subsp. fetus 82-40]
 gi|118414505|gb|ABK82925.1| exodeoxyribonuclease III [Campylobacter fetus subsp. fetus 82-40]
          Length = 252

 Score =  181 bits (460), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 66/262 (25%), Positives = 113/262 (43%), Gaps = 12/262 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +     +W+ E+ PD + LQE K  +   P E   +L +   +   
Sbjct: 1   MKLISWNVNGLRAALGKESFSWLDEHKPDFLALQEIKVSEDKIPAEIY-NLGFENISANS 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
               G + +     ++          D + R +E  F      + + N+Y P+G      
Sbjct: 60  AKRPGYSGVMSLSNLKSQNLKSQFFDDDEGRVLEHKFD----NIHLFNIYFPNGQ-SGDE 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +   K+ +  +FL + +  +   + +IF GD N   +  D  NP      + F    R  
Sbjct: 115 RLAYKMDFYDKFLSYINALVSEGKGVIFCGDVNTAHREIDLKNPKANSKTSGFLPIERAW 174

Query: 183 FQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             K+ + GF D  R  + D  + YS+W Y  ++ +KN G RID+  +S      L  A I
Sbjct: 175 IDKVIDSGFIDTFRFINGDKENAYSWWSYRFNARAKNVGWRIDYFFISSNLKDKLKDAFI 234

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
                G    SDH PV + +D+
Sbjct: 235 LDSIEG----SDHCPVGIEIDL 252


>gi|325519880|gb|EGC99152.1| exodeoxyribonuclease III [Burkholderia sp. TJI49]
          Length = 257

 Score =  181 bits (460), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 63/264 (23%), Positives = 112/264 (42%), Gaps = 14/264 (5%)

Query: 3   VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59
           ++ V T N+N IR A       W+ E N D +C+QE K    + P E ++      +   
Sbjct: 1   MMRVITANLNGIRSAAKKGFFEWLGEQNADCVCVQEIKVSADDLPAEFVEPHGLRSYFHH 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G  + S+++P +++      + D + R++EA +      L I ++Y+P G+  
Sbjct: 61  AAKKGYSGAGLYSRHEPDDVIIGFGSSEFDPEGRYVEARYG----KLSIVSVYVPSGSSG 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +                  L+ +  +I  GD NI+ +  D  N    + ++    E 
Sbjct: 117 EERQQA--KYRFMDAFMPHLAELKKKREVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEE 174

Query: 180 RQSFQK-LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R    K   ++G+ D  R        Y++W     +++KN G RID+ + +P       S
Sbjct: 175 RAWLTKLFDDVGYVDVFRTLDPRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGVAGTAKS 234

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
             I        K SDH P+ V  D
Sbjct: 235 TSIFKDI----KFSDHAPLTVDYD 254


>gi|293571415|ref|ZP_06682444.1| exodeoxyribonuclease III [Enterococcus faecium E980]
 gi|291608506|gb|EFF37799.1| exodeoxyribonuclease III [Enterococcus faecium E980]
          Length = 250

 Score =  181 bits (460), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 70/261 (26%), Positives = 112/261 (42%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +  N      E + D  CLQETK +      + L     +     +
Sbjct: 1   MKFISWNVNGLRAIVNKNFLEVFHELDADFFCLQETKLQAGQIDLD-LPGYYQYWNYAER 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K   +     +  D  D + R I   ++                +     
Sbjct: 60  KGYSGTAIFAKKPALNATYGMGIDIHDTEGRLITLEYSDF-----FLVTCYTPNSQSELK 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           + D ++ W + F  +    L+ ++P+I  GD N+  Q  D  N    + +A FT E R +
Sbjct: 115 RLDYRLEWEEAFYNYLEN-LKKQKPVIVCGDLNVAHQTIDLKNWKTNQKNAGFTPEERAA 173

Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             +L + GF D  R  +     +YS+W+Y  +S   N G RID+ + S +    L  A+I
Sbjct: 174 LSRLLDNGFIDTFRYFYPTQEGVYSWWNYRFNSRKNNAGWRIDYFLTSKDLEPRLADAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            T   G    SDH PV + L 
Sbjct: 234 HTDIMG----SDHCPVELDLK 250


>gi|225376286|ref|ZP_03753507.1| hypothetical protein ROSEINA2194_01924 [Roseburia inulinivorans DSM
           16841]
 gi|225211932|gb|EEG94286.1| hypothetical protein ROSEINA2194_01924 [Roseburia inulinivorans DSM
           16841]
          Length = 255

 Score =  181 bits (460), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 70/260 (26%), Positives = 113/260 (43%), Gaps = 13/260 (5%)

Query: 2   SVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
             +   +WNVN +RA +      +  E + D  C+QETK ++     + L   +      
Sbjct: 3   KTMKFISWNVNGLRACMQKGFLDFFNEVDADFFCVQETKLQEGQIALD-LPGYHQFWNYA 61

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+G AI +K++P+ +   +   + D + R I   +                 +   
Sbjct: 62  EKKGYSGTAIFTKHEPLSVSYGIGIPEHDHEGRVITLEYDAFYL-----VTCYTPNSQNE 116

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   ++ W + FL F  + L+  +P+I  GD N+  +  D  NP     +A F+ E R
Sbjct: 117 LARLPYRMQWEEDFLAFLKR-LDEVKPVIVCGDLNVAHEEIDLKNPKTNRKNAGFSDEER 175

Query: 181 QSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
                L N GFTD  R  +     +YS+W Y   +  KN G RID+ + S      L SA
Sbjct: 176 AKMTTLLNSGFTDTFRYFYPDKEGIYSWWSYRFKAREKNAGWRIDYFITSRCLDEKLQSA 235

Query: 240 RIDTKPRGWTKPSDHTPVIV 259
            I T+  G    SDH PV +
Sbjct: 236 GIHTEVYG----SDHCPVEL 251


>gi|33591597|ref|NP_879241.1| putative endonuclease [Bordetella pertussis Tohama I]
 gi|33571240|emb|CAE44701.1| putative endonuclease [Bordetella pertussis Tohama I]
          Length = 262

 Score =  181 bits (460), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 59/265 (22%), Positives = 106/265 (40%), Gaps = 9/265 (3%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59
           ++ + + N+N IR+     L  W+  +N D++CLQE K    +   E      Y  H   
Sbjct: 1   MLRITSLNLNGIRSAFRKGLQPWMTAHNADVLCLQEIKVSHDDLTDELRHPPGYTGHFHH 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GV +  +     +V     ++ D + R + A +  +   +         G+  
Sbjct: 61  AEKKGYSGVGMYLRAGAERVVAGFDCEEFDAEGRILRADWK-DLSVISAYLPSGSSGDER 119

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
             TKY     +        ++  +     +  GD+NI  +  D  N    + ++ F  E 
Sbjct: 120 QQTKYRFLDQFGPWLDGLMAEHRKTGREFVICGDWNIAHKEIDLKNWKGNQKNSGFLPEE 179

Query: 180 RQSFQKLQNMG-FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R    ++ +   F D  R   +    Y++W     +W+KN G RID+ + +P       +
Sbjct: 180 RAWLTEVFDRRGFVDVFRKLDERADQYTWWSNRGQAWAKNVGWRIDYQIATPGIAERARA 239

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263
             I    R     SDH P+ V  DI
Sbjct: 240 TSIYKDER----FSDHAPLTVDYDI 260


>gi|293557096|ref|ZP_06675652.1| exodeoxyribonuclease III [Enterococcus faecium E1039]
 gi|293567361|ref|ZP_06678711.1| exodeoxyribonuclease III [Enterococcus faecium E1071]
 gi|291589963|gb|EFF21761.1| exodeoxyribonuclease III [Enterococcus faecium E1071]
 gi|291600740|gb|EFF31036.1| exodeoxyribonuclease III [Enterococcus faecium E1039]
          Length = 250

 Score =  181 bits (460), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 70/261 (26%), Positives = 112/261 (42%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +  N      E + D  CLQETK +      + L     +     +
Sbjct: 1   MKFISWNVNGLRAIVNKNFLEVFHELDADFFCLQETKLQAGQIDLD-LPGYYQYWNYAER 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K   +     +  D  D + R I   ++                +     
Sbjct: 60  KGYSGTAIFAKKPALNATYGMGIDIHDTEGRLITLEYSDF-----FLVTCYTPNSQSELK 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           + D ++ W + F  +    L+ ++P+I  GD N+  Q  D  N    + +A FT E R +
Sbjct: 115 RLDYRLEWEEAFYNYLEN-LKKQKPVIVCGDLNVAHQKIDLKNWKTNQKNAGFTPEERAA 173

Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             +L + GF D  R  +     +YS+W+Y  +S   N G RID+ + S +    L  A+I
Sbjct: 174 LSRLLDNGFIDTFRYFYPTQEGVYSWWNYRFNSRKNNAGWRIDYFLTSKDLEPRLADAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            T   G    SDH PV + L 
Sbjct: 234 HTDIMG----SDHCPVELDLK 250


>gi|293602414|ref|ZP_06684860.1| exodeoxyribonuclease III [Achromobacter piechaudii ATCC 43553]
 gi|292819176|gb|EFF78211.1| exodeoxyribonuclease III [Achromobacter piechaudii ATCC 43553]
          Length = 292

 Score =  181 bits (459), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 61/266 (22%), Positives = 105/266 (39%), Gaps = 9/266 (3%)

Query: 1   MSVVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HI 57
            +++ + + N+N IR+     L  W++++  DI+CLQE K  D +   +      Y  H 
Sbjct: 29  FALLRITSINLNGIRSAFRKGLQPWMEKHAADILCLQEIKIADADLTEDLRHPPGYTGHF 88

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
               +K Y+GV I  +     +   L  ++ D + R I A +  N   +         G+
Sbjct: 89  HHAVKKGYSGVGIYLRDAAERVNIGLGCEEFDPEGRIIRADWK-NLSVISAYLPSGSSGD 147

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
                KY     +         +        +  GD+NI  +  D  N      ++ F  
Sbjct: 148 ERQQAKYRFLDRFGPWIDALMHEHKTTGREFVICGDWNIAHKEIDLKNWKGNMKNSGFLP 207

Query: 178 EVRQSFQKLQN-MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
           E R     + +  GF D  R   D    Y++W     +W+KN G RID+ + +P   +  
Sbjct: 208 EERAWLTDVFDKRGFVDVFRTIDDRPDQYTWWSNRGQAWAKNVGWRIDYQIATPGIAARA 267

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLD 262
            +  I    R     SDH P+ +  D
Sbjct: 268 RNVAIYKDER----FSDHAPLTIDYD 289


>gi|229111211|ref|ZP_04240765.1| Exodeoxyribonuclease [Bacillus cereus Rock1-15]
 gi|229146311|ref|ZP_04274682.1| Exodeoxyribonuclease [Bacillus cereus BDRD-ST24]
 gi|296504242|ref|YP_003665942.1| exodeoxyribonuclease III [Bacillus thuringiensis BMB171]
 gi|228636944|gb|EEK93403.1| Exodeoxyribonuclease [Bacillus cereus BDRD-ST24]
 gi|228672205|gb|EEL27495.1| Exodeoxyribonuclease [Bacillus cereus Rock1-15]
 gi|296325294|gb|ADH08222.1| exodeoxyribonuclease III [Bacillus thuringiensis BMB171]
          Length = 252

 Score =  181 bits (459), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 67/262 (25%), Positives = 120/262 (45%), Gaps = 14/262 (5%)

Query: 4   VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + +WNVN +RA         +++E++ DI CLQE K ++       L+    +     
Sbjct: 1   MKLISWNVNGLRAVIAKGGFLEYLEESSADIFCLQEIKLQEGQIDLN-LEGYYTYWNYAV 59

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G AI SK +P+ +   L  ++ D + R I   F                 +    
Sbjct: 60  KKGYSGTAIFSKKEPLSVTYGLGIEEHDQEGRLITLEFEDFYMI-----TLYTPNSKRGL 114

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            + D ++ W   F  +  + L+ ++P+IF GD N+  +  D  NP     +  F+ E R+
Sbjct: 115 ERLDYRMKWEDDFRSYIKR-LDEKKPVIFCGDLNVAHKEIDLKNPKSNRENPGFSDEERE 173

Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            F  +   GF D  R  +      YS+W Y   + +KN G R+D+ ++S      +  A+
Sbjct: 174 KFSCILEEGFIDTYRYLYPNQEGAYSWWSYRMGARAKNIGWRLDYFVVSERMKDQITEAK 233

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I+++  G    SDH PV + ++
Sbjct: 234 INSEVMG----SDHCPVELHIN 251


>gi|219684183|ref|ZP_03539127.1| exodeoxyribonuclease III [Borrelia garinii PBr]
 gi|219672172|gb|EED29225.1| exodeoxyribonuclease III [Borrelia garinii PBr]
          Length = 255

 Score =  181 bits (459), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 57/260 (21%), Positives = 104/260 (40%), Gaps = 12/260 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCG 61
           + + +WNVN IRA +      +++E  PDI+C+QETK   +  P + +    Y +     
Sbjct: 1   MKLISWNVNGIRAVLKKGFLEFVQEYTPDILCIQETKALKEQLPRDLILENYYSYFSKSK 60

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
            K Y+GV I SK +PI +         +     I            +        +    
Sbjct: 61  IKGYSGVCIYSKVKPIAVNLLGKEIFDNEGRGLIAYYDNF------VLINGYFPNSQALR 114

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            +   K++++          +   + ++  GD+NI     D  +P    +   + +E   
Sbjct: 115 RRLVYKLNFLSYVENLIDSLVNGGKNVVICGDFNIAHTKIDLISPDSNRDSPGYYIEETT 174

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
              +  N G+ D  R  +     Y++W Y   +  +N G RID+ +++      +  + I
Sbjct: 175 WLDRFLNKGYVDTFRIFNKEPGYYTWWSYRTRARERNMGWRIDYFVVNEFFKRNVKKSLI 234

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
             K  G    SDH PV + L
Sbjct: 235 LDKVMG----SDHCPVFLEL 250


>gi|254479049|ref|ZP_05092404.1| exodeoxyribonuclease III [Carboxydibrachium pacificum DSM 12653]
 gi|214035005|gb|EEB75724.1| exodeoxyribonuclease III [Carboxydibrachium pacificum DSM 12653]
          Length = 258

 Score =  181 bits (459), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 69/260 (26%), Positives = 118/260 (45%), Gaps = 14/260 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + +WNVN +RA +      + K  + DI C+QETK ++     E L    Y+      
Sbjct: 1   MKLVSWNVNGLRACLQKGFMDYFKAIDADIFCIQETKLQENQKDIEGLDLNGYYAFWNFA 60

Query: 62  -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+G A+ +KY+P+ +   +     D + R I   +                 +   
Sbjct: 61  EKKGYSGTAVFTKYKPLSVSYGIGTPHHDKEGRVITLEYEKF-----FLVNTYTPNSQRG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
            T+ D ++ W + F  +  + L+  +P+I  GD N+  Q  D  NP     +A FT E R
Sbjct: 116 LTRLDYRMQWEEDFRSYLLK-LDSLKPVILCGDLNVAHQEIDIKNPAANRRNAGFTDEER 174

Query: 181 QSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           +    L N GF D  R  +      Y++W Y  ++  KN G R+D+ ++S      L  +
Sbjct: 175 EKMTILLNSGFIDTFRYFYPDKKDAYTWWSYMHNAREKNIGWRVDYFIVSERLKDYLIDS 234

Query: 240 RIDTKPRGWTKPSDHTPVIV 259
           +I ++  G    SDH PV++
Sbjct: 235 QIHSEVMG----SDHCPVVL 250


>gi|150399093|ref|YP_001322860.1| exodeoxyribonuclease III Xth [Methanococcus vannielii SB]
 gi|150011796|gb|ABR54248.1| exodeoxyribonuclease III Xth [Methanococcus vannielii SB]
          Length = 257

 Score =  181 bits (459), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 71/261 (27%), Positives = 114/261 (43%), Gaps = 12/261 (4%)

Query: 3   VVTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++ + +WNVN IRA +      ++   NP+IIC+QETK +        L     +     
Sbjct: 8   IMKMISWNVNGIRACLKNGFMDFLNSKNPEIICIQETKVQKGQVQL-GLNGYFEYWNYAE 66

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G AI +K +P  +   +     D + R I   F      + +       G     
Sbjct: 67  KKGYSGTAIFTKIEPKSVKYGITNYKSDKEGRVITLEFEEY-FLVNVYTPNSQRGLKRLE 125

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            +         +      + LE ++P+IF GD N+  +  D  NP     +A FT E R 
Sbjct: 126 CRQ-----KWDKDFLNHLKTLEQKKPVIFCGDLNVAHKEIDLKNPKQNIKNAGFTKEERN 180

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
            F  L N GF D  R  ++    Y++W Y  ++  KN G RID+  +S +    L  A I
Sbjct: 181 GFDNLINSGFLDTFRELNNEPENYTWWSYRFNAREKNIGWRIDYFCISKKLRERLKDAFI 240

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            ++  G    SDH PV + ++
Sbjct: 241 MSEVLG----SDHCPVGIIIE 257


>gi|261208808|ref|ZP_05923245.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth
           [Enterococcus faecium TC 6]
 gi|289566402|ref|ZP_06446829.1| exodeoxyribonuclease III [Enterococcus faecium D344SRF]
 gi|294614472|ref|ZP_06694388.1| exodeoxyribonuclease III [Enterococcus faecium E1636]
 gi|260077310|gb|EEW65030.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth
           [Enterococcus faecium TC 6]
 gi|289161777|gb|EFD09650.1| exodeoxyribonuclease III [Enterococcus faecium D344SRF]
 gi|291592780|gb|EFF24373.1| exodeoxyribonuclease III [Enterococcus faecium E1636]
          Length = 250

 Score =  181 bits (459), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 70/260 (26%), Positives = 112/260 (43%), Gaps = 13/260 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +  N      E + D  CLQETK +      + L     +     +
Sbjct: 1   MKFISWNVNGLRAIVNKNFLEVFHELDADFFCLQETKLQAGQIDLD-LPGYYQYWNYAER 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K   +     +  D  D + R I   ++                +     
Sbjct: 60  KGYSGTAIFAKKPALNATYGMGIDIHDTEGRLITLEYSDF-----FLVTCYTPNSQSELK 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           + D ++ W + F  +    L+ ++P+I  GD N+  Q  D  N    + +A FT E R +
Sbjct: 115 RLDYRLEWEEAFYNYLEN-LKKQKPVIVCGDLNVAHQKIDLKNWKTNQKNAGFTPEERAA 173

Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             +L + GF D  R  +     +YS+W+Y  +S   N G RID+ + S +    L  A+I
Sbjct: 174 LSRLLDNGFIDTFRYFYPTQEGVYSWWNYRFNSRKNNAGWRIDYFLTSKDLEPRLADAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
            T   G    SDH PV + L
Sbjct: 234 HTDIMG----SDHCPVELDL 249


>gi|229104299|ref|ZP_04234968.1| Exodeoxyribonuclease [Bacillus cereus Rock3-28]
 gi|229117223|ref|ZP_04246601.1| Exodeoxyribonuclease [Bacillus cereus Rock1-3]
 gi|228666123|gb|EEL21587.1| Exodeoxyribonuclease [Bacillus cereus Rock1-3]
 gi|228678997|gb|EEL33205.1| Exodeoxyribonuclease [Bacillus cereus Rock3-28]
          Length = 252

 Score =  181 bits (459), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 64/262 (24%), Positives = 120/262 (45%), Gaps = 14/262 (5%)

Query: 4   VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + +WNVN +RA         +++E+N DI CLQE K +         +    +     
Sbjct: 1   MKLISWNVNGLRAVIAKGGFLEYLEESNADIFCLQEIKLQSGQIDLNP-EGYYTYWNYAV 59

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G AI +K +P+ +   L  ++ D + R I   F  +   + +       G     
Sbjct: 60  KKGYSGTAIFTKKEPLSVTYGLGIEEHDQEGRVITLEFE-DFYMITLYTPNSKRGLERLD 118

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            + +      +   R   ++L+ ++P++F GD N+  +  D  NP     +  F+ E R+
Sbjct: 119 YRME-----WEDDFRTYIKQLDEKKPVVFCGDLNVAHKEIDLKNPKSNRKNPGFSDEERE 173

Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            F ++   GF D  R  +      YS+W Y   + +KN G R+D+ ++S      +  A+
Sbjct: 174 KFTRILEEGFVDTYRHLYPNQEGAYSWWSYRMGARAKNIGWRLDYFVVSERIKGQITDAK 233

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I+++  G    SDH PV + ++
Sbjct: 234 INSEIMG----SDHCPVELHIN 251


>gi|254251096|ref|ZP_04944414.1| Exonuclease III [Burkholderia dolosa AUO158]
 gi|124893705|gb|EAY67585.1| Exonuclease III [Burkholderia dolosa AUO158]
          Length = 257

 Score =  181 bits (459), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 62/264 (23%), Positives = 112/264 (42%), Gaps = 14/264 (5%)

Query: 3   VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59
           ++ V T N+N IR A       W+ + N D +C+QE K    + P E ++      +   
Sbjct: 1   MMRVITANLNGIRSAAKKGFFDWLGQQNADCVCVQEIKVSADDLPAEFVEPHGLRSYFHH 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G  + S+ +P +++      + D + R++EA +      L I ++Y+P G+  
Sbjct: 61  AAKKGYSGAGLYSRREPDDVIIGFGSSEFDPEGRYVEARYG----KLSIVSVYVPSGSSG 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +                  L+ +  +I  GD NI+ +  D  N    + ++    E 
Sbjct: 117 DERQQA--KYRFMDEFMPHLAELKKKREVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEE 174

Query: 180 RQSFQK-LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R    K   ++G+ D  R        Y++W     +++KN G RID+ + +P   +   S
Sbjct: 175 RAWLTKLFDDVGYVDVFRTLDPRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGVAATAKS 234

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
             I        K SDH P+ V  D
Sbjct: 235 TSIFKDI----KFSDHAPLTVDYD 254


>gi|33598562|ref|NP_886205.1| putative endonuclease [Bordetella parapertussis 12822]
 gi|33603508|ref|NP_891068.1| putative endonuclease [Bordetella bronchiseptica RB50]
 gi|33574691|emb|CAE39344.1| putative endonuclease [Bordetella parapertussis]
 gi|33577632|emb|CAE34897.1| putative endonuclease [Bordetella bronchiseptica RB50]
          Length = 262

 Score =  181 bits (459), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 58/265 (21%), Positives = 105/265 (39%), Gaps = 9/265 (3%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59
           ++ + + N+N IR+     L  W+  +N D++CLQE K    +   E      Y  H   
Sbjct: 1   MLRITSLNLNGIRSAFRKGLQPWMTAHNADVLCLQEIKVSHDDLTDELRHPPGYTGHFHH 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GV +  +     +V     ++ D + R + A +  +   +         G+  
Sbjct: 61  AEKKGYSGVGMYLRAGAERVVAGFDCEEFDAEGRILRADWK-DLSVISAYLPSGSSGDER 119

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              KY     +        ++  +     +  GD+NI  +  D  N    + ++ F  E 
Sbjct: 120 QQAKYRFLDQFGPWLDGLMAEHRKTGREFVICGDWNIAHKEIDLKNWKGNQKNSGFLPEE 179

Query: 180 RQSFQKLQNMG-FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R    ++ +   F D  R   +    Y++W     +W+KN G RID+ + +P       +
Sbjct: 180 RAWLTEVFDRRGFVDVFRKLDERADQYTWWSNRGQAWAKNVGWRIDYQIATPGIAERARA 239

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263
             I    R     SDH P+ V  DI
Sbjct: 240 TSIYKDER----FSDHAPLTVDYDI 260


>gi|90421802|ref|YP_530172.1| exodeoxyribonuclease III (xth) [Rhodopseudomonas palustris BisB18]
 gi|90103816|gb|ABD85853.1| exodeoxyribonuclease III (xth) [Rhodopseudomonas palustris BisB18]
          Length = 270

 Score =  181 bits (459), Expect = 9e-44,   Method: Composition-based stats.
 Identities = 75/270 (27%), Positives = 129/270 (47%), Gaps = 10/270 (3%)

Query: 4   VT--VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETC 60
           +   ++TWN+NS+R RI  +A +++   PD++CLQETK  D  FP +  + L Y H+   
Sbjct: 1   MRFSLSTWNINSVRLRIDLVAKFLESERPDVLCLQETKCPDDAFPLKRFKRLGYEHVALN 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           GQK Y+GVAI+S+         +  ++LD +   +       +  L + N Y+P G  I 
Sbjct: 61  GQKGYHGVAIISRLPFASTDVRIFCENLDSRHISVAFAAEHTSAPLVLHNFYVPAGGDIP 120

Query: 121 ----STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
               + K+  K++++           + +   I  GD N+ P  HD ++          T
Sbjct: 121 DPELNPKFKHKLAFLDEMKSCEPLHPQGDARHILVGDLNVAPHEHDVWSHKQLLKVVSHT 180

Query: 177 LEVRQS--FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEAT 233
               +     + Q      A      +  +Y++W Y A  W+  N+G R+DHI +SP   
Sbjct: 181 PIECEKLLAAQHQGGWLDVARERIALSDKIYTWWSYRAADWTIANRGRRLDHIWVSPALG 240

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             +   ++    RGW +PSDH PV V++++
Sbjct: 241 PCVQDYQVTRDARGWERPSDHVPVTVTMEL 270


>gi|228922454|ref|ZP_04085756.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar huazhongensis
           BGSC 4BD1]
 gi|228837168|gb|EEM82507.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar huazhongensis
           BGSC 4BD1]
          Length = 252

 Score =  181 bits (459), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 68/262 (25%), Positives = 120/262 (45%), Gaps = 14/262 (5%)

Query: 4   VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + +WNVN +RA         +++E++ DI CLQE K ++       L+    +     
Sbjct: 1   MKLISWNVNGLRAVIAKGGFLEYLEESSADIFCLQEIKLQEGQIDLN-LEGYYTYWNYAV 59

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G AI SK +P+ +   L  ++ D + R I   F                 +    
Sbjct: 60  KKGYSGTAIFSKKEPLSVTYGLDIEEHDQEGRLITLEFEDFYMI-----TLYTPNSKRGL 114

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            + D ++ W   F  +  + L+ ++P+IF GD N+  +  D  NP     +  F+ E R+
Sbjct: 115 ERLDYRMKWEDDFRSYIKR-LDEKKPVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEERE 173

Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            F  +   GF D  R  +      YS+W Y   + +KN G R+D+ ++S      +  A+
Sbjct: 174 KFSCILEEGFIDTYRYLYPDQEDAYSWWSYRMGARAKNIGWRLDYFVVSERMKDQITEAK 233

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I+T+  G    SDH PV + ++
Sbjct: 234 INTEVMG----SDHCPVELHIN 251


>gi|294055155|ref|YP_003548813.1| exodeoxyribonuclease III Xth [Coraliomargarita akajimensis DSM
           45221]
 gi|293614488|gb|ADE54643.1| exodeoxyribonuclease III Xth [Coraliomargarita akajimensis DSM
           45221]
          Length = 262

 Score =  181 bits (459), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 73/265 (27%), Positives = 109/265 (41%), Gaps = 7/265 (2%)

Query: 1   MSVVTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIE 58
           MS   + +WNVN +RA +      ++    PD++CLQETK               Y +  
Sbjct: 1   MSPTHLLSWNVNGLRAVLKKGFDDFLASQQPDVLCLQETKISADLTADFAFAGYPYVYWN 60

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
              +K Y+G AI+S+ +PI +   L  +  D + R I A F               H   
Sbjct: 61  CAEKKGYSGTAIISQIEPISVRYGLGIEKHDQEGRVITAEFEDYYLVTVYTPNSQNHDEN 120

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
               + D +            + LE+ +P++F GD N+     D  NP     +A FT E
Sbjct: 121 KRPRRLDYRTLEWDVDFLAYVKGLEVTKPVVFCGDLNVAHTEIDLANPKTNRKNAGFTDE 180

Query: 179 VRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
            R  F  +   GF D  R  +      YS+W Y A +  +N G RID+  +S    + + 
Sbjct: 181 ERGRFDAIIEAGFIDTFRHLYPDRTEQYSWWSYRAAARQRNIGWRIDYFCVSDAVKNQIR 240

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLD 262
            A I     G    SDH PV + L 
Sbjct: 241 DATILADTLG----SDHCPVGLRLK 261


>gi|107024036|ref|YP_622363.1| exodeoxyribonuclease III (xth) [Burkholderia cenocepacia AU 1054]
 gi|116691123|ref|YP_836746.1| exodeoxyribonuclease III Xth [Burkholderia cenocepacia HI2424]
 gi|170734454|ref|YP_001766401.1| exodeoxyribonuclease III Xth [Burkholderia cenocepacia MC0-3]
 gi|254246884|ref|ZP_04940205.1| AP endonuclease, family 1 [Burkholderia cenocepacia PC184]
 gi|105894225|gb|ABF77390.1| exodeoxyribonuclease III (xth) [Burkholderia cenocepacia AU 1054]
 gi|116649212|gb|ABK09853.1| exodeoxyribonuclease III Xth [Burkholderia cenocepacia HI2424]
 gi|124871660|gb|EAY63376.1| AP endonuclease, family 1 [Burkholderia cenocepacia PC184]
 gi|169817696|gb|ACA92279.1| exodeoxyribonuclease III Xth [Burkholderia cenocepacia MC0-3]
          Length = 257

 Score =  181 bits (459), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 61/264 (23%), Positives = 113/264 (42%), Gaps = 14/264 (5%)

Query: 3   VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59
           ++ V T N+N IR A       W+ E N D +C+QE K    + P E ++   +  +   
Sbjct: 1   MMRVITANLNGIRSAAKKGFFDWLGEQNADCVCVQEIKVSADDLPAEFVEPHGFKSYFHH 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G  + S+ +P +++      + D + R++EA +      L + ++Y+P G+  
Sbjct: 61  AEKKGYSGAGVYSRREPDDVIIGFGSSEFDPEGRYVEARYG----KLSVVSVYVPSGSSG 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +                  L+ +  +I  GD NI+ +  D  N    + ++    E 
Sbjct: 117 EERQQA--KYRFMAEFMPHLAALKKKREVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEE 174

Query: 180 RQSFQK-LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R+   K   ++G+ D  R        Y++W     +++KN G RID+ + +P       S
Sbjct: 175 REWLTKLFDDVGYVDVFRTLDQRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGVAGTAKS 234

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
             I        K SDH P+ +  D
Sbjct: 235 TSIFKDI----KFSDHAPLTIDYD 254


>gi|157164085|ref|YP_001465973.1| exodeoxyribonuclease III [Campylobacter concisus 13826]
 gi|112801830|gb|EAT99174.1| exodeoxyribonuclease III [Campylobacter concisus 13826]
          Length = 252

 Score =  181 bits (459), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 68/263 (25%), Positives = 116/263 (44%), Gaps = 14/263 (5%)

Query: 4   VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + +WNVN +RA         W+ E  PD + LQE K ++ + P E   +L +   +  
Sbjct: 1   MKLISWNVNGLRAVVAKDGFG-WLDEVKPDFLGLQEIKVKEDDVPKEIY-NLGFKDISVN 58

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
             +  G + +      E+ T       D + R +E  F      + + N+Y P+G     
Sbjct: 59  SGARAGYSGVMSLAKFEVQTQKAAFFDDTEGRVLEHRFD----DIVLFNIYFPNGQ-KDD 113

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            +   K+ + ++FL +  + ++  + +IF GD N   +  D  NP      + F    R 
Sbjct: 114 ERLAYKMDFYEKFLAYCKELVKSGKEVIFCGDVNTAHREIDLKNPKANAKTSGFLPIERA 173

Query: 182 SFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
              ++   GF D  RA + D    YS+W Y  ++ +KN G RID+  +S      L  A 
Sbjct: 174 WIDEVLKSGFIDTFRAVNGDVADAYSWWSYRFNARAKNVGWRIDYFFISQGLKDRLKDAF 233

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263
           I  +  G    SDH PV + ++I
Sbjct: 234 ILPEIVG----SDHCPVGIEIEI 252


>gi|317401341|gb|EFV81978.1| endonuclease [Achromobacter xylosoxidans C54]
          Length = 262

 Score =  181 bits (459), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 60/264 (22%), Positives = 106/264 (40%), Gaps = 9/264 (3%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59
           ++ + + N+N IR+     L  W++++  D++CLQE K  D++   +      Y  H   
Sbjct: 1   MLRITSINLNGIRSAFRKGLQPWMEKHAADVLCLQEIKVSDEDLTEDLRHPPGYTGHFHH 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GV I  +     +   L  ++ D + R I A +  N   +         G+  
Sbjct: 61  AVKKGYSGVGIYLRDAAERVSIGLGCEEFDPEGRIIRADWK-NLSVISAYLPSGSSGDER 119

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              KY     +         +  +     +  GD+NI  +  D  N      ++ F  E 
Sbjct: 120 QQAKYRFLDRFGPWIDELMHEHKKTGREFVICGDWNIAHKEIDLKNWKGNLKNSGFLPEE 179

Query: 180 RQSFQKLQN-MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R     + +  GF D  R   +    Y++W     +W+KN G RID+ + +P   +   S
Sbjct: 180 RAWLTDVFDKRGFVDVFRTIDERPDQYTWWSNRGQAWAKNVGWRIDYQIATPGIAARARS 239

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
             I    R     SDH P+ +  D
Sbjct: 240 VAIYKDER----FSDHAPLTIDYD 259


>gi|229168476|ref|ZP_04296199.1| Exodeoxyribonuclease [Bacillus cereus AH621]
 gi|228614882|gb|EEK71984.1| Exodeoxyribonuclease [Bacillus cereus AH621]
          Length = 252

 Score =  181 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 67/262 (25%), Positives = 118/262 (45%), Gaps = 14/262 (5%)

Query: 4   VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + +WNVN +RA         +++E+N DI CLQE K +         +    +     
Sbjct: 1   MKLISWNVNGLRAVIAKGGFLEYLEESNADIFCLQEIKLQSGQIDLNP-EGYYTYWNYAV 59

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G AI +K +PI +   L  ++ D + R I   F                 +    
Sbjct: 60  KKGYSGTAIFTKKEPISVTYGLGIEEHDQEGRVITLEFDDFYMI-----TLYTPNSKRGL 114

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            + D ++ W   F  +  + L+ ++P+IF GD N+  +  D  NP     +  F+ E R+
Sbjct: 115 ERLDYRMEWEDDFRAYIKR-LDEKKPVIFCGDLNVAHKEVDLKNPKSNRKNPGFSDEERE 173

Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            F  +   GF D  R  +      YS+W Y   + +KN G R+D+ ++S      +  A+
Sbjct: 174 KFTCVLEAGFIDTYRYLYPDQEGAYSWWSYRMGARAKNIGWRLDYFVISERLKHKITDAK 233

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I+++  G    SDH PV + ++
Sbjct: 234 INSEVMG----SDHCPVELHIN 251


>gi|56963720|ref|YP_175451.1| exodeoxyribonuclease III [Bacillus clausii KSM-K16]
 gi|56909963|dbj|BAD64490.1| exodeoxyribonuclease III [Bacillus clausii KSM-K16]
          Length = 260

 Score =  181 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 67/270 (24%), Positives = 114/270 (42%), Gaps = 13/270 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +      + ++ + D+ CLQETK +      E L     +     +
Sbjct: 1   MKFVSWNVNGLRACVKKGFLDFFQQVDADVFCLQETKLQKGQISLE-LPGYEQYWNDAER 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K+ P+ +   +     + + R I   F                      +
Sbjct: 60  KGYSGTAIFTKHSPLSVTYGIGDHFPENEGRVITLEFET-----YYVVTMYTPNAKRDLS 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +   ++ W K    +    L  ++P++F GD N+  QP D  N      ++ FT E R  
Sbjct: 115 RLPYRLQWEKAAREY-LTLLATQKPVVFCGDLNVAHQPIDVRNDRANVGNSGFTDEERAE 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F KL   GF D  R  +      +++W Y A+  ++N G RID+ ++S      L  A I
Sbjct: 174 FGKLLEAGFVDTFRHFYPDDEDAFTWWSYMANVRARNIGWRIDYFLISRALMPYLVDASI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271
            +   G    SDH P+ + LD+      + 
Sbjct: 234 HSSVLG----SDHCPIELCLDLQPNESSRP 259


>gi|315657850|ref|ZP_07910730.1| exodeoxyribonuclease III [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
 gi|315491647|gb|EFU81258.1| exodeoxyribonuclease III [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
          Length = 286

 Score =  181 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 69/286 (24%), Positives = 122/286 (42%), Gaps = 27/286 (9%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSIR R++ + A+++  N D++ +QE K  +  FP    ++  Y +   G  
Sbjct: 1   MRIATWNVNSIRTRVNRVTAFLERENIDVLAMQEIKCRNDQFPTLAFETAGYQVFVNGLN 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT---------INTQTLRIGNLYLP 114
            +NGVA+ ++      +          Q  F               +    +   +LY+P
Sbjct: 61  QWNGVAVAARQGISAHLLGTEFYGSIDQPYFSVPPKPPQLEPRVLGVRVAGVECWSLYVP 120

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPL--IFAGDYNIIPQPHDCYNPIIWEND 172
           +G  +    Y  K+ W+        + L+ +     ++ GD+N+ P+  D ++   +   
Sbjct: 121 NGREVGHLHYQYKLKWLDSLRSHVIRTLDTDPESLGLYLGDFNVAPRDEDVWDMADFAGA 180

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHD----------------THHLYSFWDYYADSWS 216
              +   RQ F KL +          HD                    +++WDY    W 
Sbjct: 181 THVSEPERQVFAKLLDPDTVADAVTLHDDLIEGLPGNLTEITRKFAPGWTYWDYQRARWR 240

Query: 217 KNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
           +N+G++ID  + +P   S +  A IDT  R   +PSDH PVIV  +
Sbjct: 241 RNQGMKIDFALATPRLASRVTGAYIDTAERDGEQPSDHAPVIVDFE 286


>gi|150398248|ref|YP_001328715.1| exodeoxyribonuclease III [Sinorhizobium medicae WSM419]
 gi|150029763|gb|ABR61880.1| exodeoxyribonuclease III [Sinorhizobium medicae WSM419]
          Length = 268

 Score =  181 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 70/266 (26%), Positives = 110/266 (41%), Gaps = 6/266 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +++ATWN+NS+R R+  +  ++K   PDI+CLQE K  +  FP   L+ L Y       +
Sbjct: 3   LSIATWNINSVRLRMPLVEHFLKTWQPDILCLQEIKCINDQFPSAPLRKLGYEYIEMHGQ 62

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
                       P+  ++          AR +   F    +T+R+ N Y+P G       
Sbjct: 63  KGYHGVATISRLPLHQLSDRRDYCGIGDARHLSVVFAAGGKTIRLHNFYVPAGGDEPDRT 122

Query: 124 YDDKISWIKRFLRFASQRL---ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
            + K      F+          E     I  GD NI P  HD ++          T    
Sbjct: 123 VNPKFGHKLDFVDEMKLLHAEAEEGISSILVGDLNIAPLEHDVWSHKQLLKIVSHTPIET 182

Query: 181 QSFQKLQNMGFTDAIRATH--DTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLLH 237
           +    +   G    +   H      LY++W Y A  W + ++G R+DHI  S +  + L 
Sbjct: 183 EGLISVMTGGAWVDLMRRHTPPPEKLYTWWSYRAKDWAAADRGRRLDHIWSSADLANQLV 242

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263
              I  + RGW +PSDH PVI   ++
Sbjct: 243 RVEIIKEARGWERPSDHVPVIAHFEL 268


>gi|291523803|emb|CBK89390.1| exodeoxyribonuclease III [Eubacterium rectale DSM 17629]
          Length = 251

 Score =  181 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 66/261 (25%), Positives = 111/261 (42%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +      +    + D  C+QE+K +      + L   + +     +
Sbjct: 1   MKFISWNVNGLRACVQKGFLDFFNSIDVDFFCIQESKLQAGQIDLD-LPGYHQYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +P+ +   +  ++ D + R I   +        +   Y P+       
Sbjct: 60  KGYSGTAIFAKNEPLSVSYGIGIEEHDKEGRVITLEYD----NFYLVTCYTPNSQNELKR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
               ++ W   F  +    L+ ++P++  GD N+     D  NP     +A F+ E R  
Sbjct: 116 -LPYRMQWEDDFREYLKA-LDAQKPVVLCGDLNVAHNEIDLKNPKTNRKNAGFSDEERAK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             +L   GFTD  R  +     +YS+W Y   +  KN G RID+ + S      L  A I
Sbjct: 174 MTELLGSGFTDTFRYFYPDAEGIYSWWSYRFKAREKNAGWRIDYFITSKRINDKLKKAAI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            T   G    SDH PV V ++
Sbjct: 234 HTDVLG----SDHCPVEVDIE 250


>gi|298528123|ref|ZP_07015527.1| exodeoxyribonuclease III [Desulfonatronospira thiodismutans ASO3-1]
 gi|298511775|gb|EFI35677.1| exodeoxyribonuclease III [Desulfonatronospira thiodismutans ASO3-1]
          Length = 254

 Score =  181 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 64/261 (24%), Positives = 110/261 (42%), Gaps = 8/261 (3%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN  RA        W ++ N D++CLQETK      P +  +   Y+I     
Sbjct: 1   MIIYSWNVNGFRAVTGKGFWDWFQDRNIDVLCLQETKAHPDQLPAKDKEVSGYNIYWNPA 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           +   G +  + +  +E      G   +           +  ++  + N+Y P+G      
Sbjct: 61  RIKKGYSGTACFYRLEPQYISTGLPQEHLNGEGRM-ILMEYESFYLFNVYFPNGQMSHER 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                           +Q L  ++P++  GD+N   +  D  NP   E+ + F    RQ 
Sbjct: 120 LK--FKLNYYDRFLEYAQDLRRKKPIVVCGDFNTAHKDIDLKNPRANEDRSGFLPVERQW 177

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
             K  + G+ D  R  +     Y++W Y   + S+N G RID+  +S E  S + +A I+
Sbjct: 178 LDKFIDHGYVDTFRMFNQEGGNYTWWTYRFGARSRNAGWRIDYFFVSEELRSNVQNAWIE 237

Query: 243 TKPRGWTKPSDHTPVIVSLDI 263
            +  G    SDH PV + L+I
Sbjct: 238 PQVMG----SDHCPVGLKLNI 254


>gi|167950326|ref|ZP_02537400.1| exonuclease III [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 272

 Score =  181 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 80/272 (29%), Positives = 128/272 (47%), Gaps = 12/272 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N N IR R H L    + ++PD+I +QE+K +D++FP E   +L ++    GQK
Sbjct: 1   MKIVSFNTNGIRTREHQLQQLKQRHDPDVIGIQESKVQDQDFPLEMTSALGFNAGYFGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-TQTLRIGNLYLPHG--NPIT 120
           ++ GVA+LSK  P+ +    PGD +D Q R I   F  +    + +    LP G    +T
Sbjct: 61  THYGVALLSKQAPLSLQKGFPGDPVDAQRRMIIGRFATDKGNQVTVIKWLLPAGVRTSLT 120

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDAC 174
            +      S       +  Q    ++ L+  GD NI P         D     +     C
Sbjct: 121 RSNIRLSASSTPICSLYLQQHHSPDDNLLVIGDMNIAPLDLDIGIGPDNAKRWLKSGKCC 180

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPE 231
           F  E R+  Q+L + G  D  R  +      +S++DY +  + +   +G+RID I+ S  
Sbjct: 181 FLPEEREWLQRLTDWGLHDTFRGHYPEVDDRFSWFDYRSRGFDREPKRGLRIDLILASAS 240

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             +    A ID + RG  KPSDH P+    DI
Sbjct: 241 LNAACSDAGIDYEIRGMQKPSDHCPIWAEFDI 272


>gi|329941236|ref|ZP_08290515.1| exodeoxyribonuclease [Streptomyces griseoaurantiacus M045]
 gi|329299767|gb|EGG43666.1| exodeoxyribonuclease [Streptomyces griseoaurantiacus M045]
          Length = 267

 Score =  181 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 54/267 (20%), Positives = 98/267 (36%), Gaps = 8/267 (2%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++TV + NVN +RA        W+   + D++CLQE + E    P E  +   +H+    
Sbjct: 1   MLTVTSVNVNGLRAAARKGFVEWLAATSADVLCLQEVRAEPHQMPQEVREPQGWHVVHAP 60

Query: 62  Q--KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
              K   GV++ ++ +P  +       + DV  R++EA     T    +       G   
Sbjct: 61  AAAKGRAGVSLYTRREPDAVRVGFGSTEFDVSGRYVEADLPGVTVA-SLYLPSGQVGTER 119

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              KY     ++        +       ++  GD+NI     D  N      +A F  E 
Sbjct: 120 QDEKYRFMDEFLAYLKELRVRAAAEGREVVVCGDWNIAHHEADLKNWRANTKNAGFLPEE 179

Query: 180 RQSFQKLQN----MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
           R    ++ +               +    Y++W Y   ++  + G RID  + +P     
Sbjct: 180 RAWLSRVLDAEDGGYVDVMRALHPEVEGPYTWWSYRGRAFDNDSGWRIDLAVATPGLARR 239

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262
                ++       + SDH PV V  +
Sbjct: 240 AVKGFVERAASHEERWSDHAPVTVVYE 266


>gi|254168985|ref|ZP_04875824.1| exodeoxyribonuclease III [Aciduliprofundum boonei T469]
 gi|197622091|gb|EDY34667.1| exodeoxyribonuclease III [Aciduliprofundum boonei T469]
          Length = 255

 Score =  181 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 71/266 (26%), Positives = 120/266 (45%), Gaps = 14/266 (5%)

Query: 1   MSVVTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           M ++ + +WNVN IRA +      ++++  PDI+ LQE K  + N P E     +YH   
Sbjct: 1   MELL-LISWNVNGIRACVRNGFLDFLEKYKPDILALQEIKATEDNVPMEVRYYPDYHKYW 59

Query: 60  CG--QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
               +K Y G A+ +K +P+ +   +  D  D + R I A +        + N Y P+  
Sbjct: 60  NPAKKKGYAGTALFTKIEPLNVKFGIGEDKFDSEGRVITAEYE----KFYLVNAYFPNSQ 115

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
              +    D      + +      L  ++P+I  GD+N+  +  D  NP     +A FT 
Sbjct: 116 HGLTRL--DFKIEFDKLIHSYLNELRKKKPVILCGDFNVAHKEIDLANPKQNVKNAGFTP 173

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
           + R    K    G+ D  R        Y++W Y   +  +N G R+D+ ++S E    + 
Sbjct: 174 QERAWMDKFLQDGYIDTFRMFTKEGGHYTWWTYRFKARERNIGWRVDYFVVSEELKDKVK 233

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263
           S+ I ++  G    SDH P+ + LDI
Sbjct: 234 SSWILSEVYG----SDHAPIAMVLDI 255


>gi|219685209|ref|ZP_03540029.1| exodeoxyribonuclease III [Borrelia garinii Far04]
 gi|219673305|gb|EED30324.1| exodeoxyribonuclease III [Borrelia garinii Far04]
          Length = 254

 Score =  181 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 57/260 (21%), Positives = 104/260 (40%), Gaps = 12/260 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCG 61
           + + +WNVN IRA +      +++E  PDI+C+QETK   +  P + +    Y +     
Sbjct: 1   MKLISWNVNGIRAVLKKGFLEFVQEYTPDILCVQETKALKEQLPRDLILENYYSYFSKSK 60

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
            K Y+GV I SK +PI +         +     I            +        +    
Sbjct: 61  IKGYSGVCIYSKVKPIAVNLLGKEIFDNEGRGLIAYYDNF------VLINGYFPNSQALR 114

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            +   K++++          +   + ++  GD+NI     D  +P    +   + +E   
Sbjct: 115 RRLVYKLNFLSYVENLIDSLVNGGKNVVICGDFNIAHTKIDLISPDSNRDSPGYYIEETT 174

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
              +  N G+ D  R  +     Y++W Y   +  +N G RID+ +++      +  + I
Sbjct: 175 WLDRFLNKGYVDTFRIFNKEPGYYTWWSYRTRARERNMGWRIDYFIVNEFFKRNVKKSLI 234

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
             K  G    SDH PV + L
Sbjct: 235 LDKVMG----SDHCPVFLEL 250


>gi|229134542|ref|ZP_04263353.1| Exodeoxyribonuclease [Bacillus cereus BDRD-ST196]
 gi|228648935|gb|EEL04959.1| Exodeoxyribonuclease [Bacillus cereus BDRD-ST196]
          Length = 252

 Score =  181 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 67/262 (25%), Positives = 118/262 (45%), Gaps = 14/262 (5%)

Query: 4   VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + +WNVN +RA         +++E+N DI CLQE K +         +    +     
Sbjct: 1   MKLISWNVNGLRAVIAKGGFLEYLEESNADIFCLQEIKLQSGQIDLNP-EGYYTYWNYAV 59

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G AI +K +PI +   L  ++ D + R I   F                 +    
Sbjct: 60  KKGYSGTAIFTKKEPISVTYGLGIEEHDQEGRVITLEFDDFYMI-----TLYTPNSKRGL 114

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            + D ++ W   F  +  + L+ ++P+IF GD N+  +  D  NP     +  F+ E R+
Sbjct: 115 ERLDYRMEWEDDFRAYIKR-LDEKKPVIFCGDLNVAHKEVDLKNPKSNRKNPGFSDEERE 173

Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            F  +   GF D  R  +      YS+W Y   + +KN G R+D+ ++S      +  A+
Sbjct: 174 KFTCVLEAGFIDTYRYLYPDQEGAYSWWSYRMGARAKNIGWRLDYFVISERLKHKITDAK 233

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I+++  G    SDH PV + ++
Sbjct: 234 INSEIMG----SDHCPVELHIN 251


>gi|254522062|ref|ZP_05134117.1| exodeoxyribonuclease III [Stenotrophomonas sp. SKA14]
 gi|219719653|gb|EED38178.1| exodeoxyribonuclease III [Stenotrophomonas sp. SKA14]
          Length = 268

 Score =  181 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 66/276 (23%), Positives = 111/276 (40%), Gaps = 24/276 (8%)

Query: 3   VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
              + ++N N IR A       W +  + D++C+QETK ++        +   +H     
Sbjct: 2   TFRIISFNANGIRSAATKGFLDWFRAQDADVLCIQETKAQEDQLTDPMFRPDGHHCFYRD 61

Query: 62  ---QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
              +K Y+GVAI SK +P +++T L     D + R+IEA +      L + + Y+P G+ 
Sbjct: 62  AITKKGYSGVAIYSKREPDQVITSLGWAPFDDEGRYIEARYG----NLSVVSFYIPSGS- 116

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
               +   K   ++       +        +  GD+NI+    D  N    + ++    E
Sbjct: 117 SGDLRQGFKFEVMEWLRPILEEWARSGRDYVLCGDWNIVRSALDIKNWKSNQKNSGCLPE 176

Query: 179 VRQSFQKLQNMG-----------FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227
            R     L               + DA R  + T   Y++W     + + N G RID+  
Sbjct: 177 ERDWLNALCADHGQATDVAAGRGWADAYRLLNPTGEDYTWWSNRGAARANNVGWRIDYQF 236

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           ++P     L S  I    R     SDH P IV  D+
Sbjct: 237 ITPGLRDRLRSCSIYRDER----FSDHAPFIVDYDL 268


>gi|254486587|ref|ZP_05099792.1| exodeoxyribonuclease III [Roseobacter sp. GAI101]
 gi|214043456|gb|EEB84094.1| exodeoxyribonuclease III [Roseobacter sp. GAI101]
          Length = 290

 Score =  181 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 83/264 (31%), Positives = 122/264 (46%), Gaps = 10/264 (3%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQK 63
           T+ATWN+NS+R R   +   ++E  PDI+CLQE K+     P E   +  Y H+   GQK
Sbjct: 32  TLATWNINSVRLREPIVLKLLQEQGPDILCLQECKSPVDKIPTEAFAAAGYTHMVARGQK 91

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            YNGVAILS+    ++     GD                   + I N Y+P G  +   +
Sbjct: 92  GYNGVAILSRLPLEDV-----GDQDFADLGHARHVAARLENGVTIQNFYVPAGGDVADRE 146

Query: 124 YDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180
            ++K      +L         ++P      GD NI P+  D +           T  EV 
Sbjct: 147 VNEKFGQKLDYLAGMRDWFRGDKPRKSILVGDLNIAPREDDVWGHKQLLKVVSHTPIEVE 206

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHSA 239
           +  +     GF D  R      +LYS+W Y A  W   +KG R+DH+  +P+ ++  HS+
Sbjct: 207 KLAETQDAGGFIDITRQDIPEGNLYSWWSYRAKDWDAADKGRRLDHVWATPDISNAAHSS 266

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
           R+    RGW KPSDH PV  + D+
Sbjct: 267 RVLRDARGWEKPSDHAPVFATFDL 290


>gi|119476762|ref|ZP_01617072.1| exodeoxyribonuclease III [marine gamma proteobacterium HTCC2143]
 gi|119450018|gb|EAW31254.1| exodeoxyribonuclease III [marine gamma proteobacterium HTCC2143]
          Length = 257

 Score =  181 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 67/265 (25%), Positives = 111/265 (41%), Gaps = 13/265 (4%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + V + N N IRA        W+   + D++C+QETK +             YH      
Sbjct: 1   MRVISVNTNGIRAAARKGFFDWLALQSADVVCIQETKAQIDQLADPVFHPEGYHCYYFDA 60

Query: 62  -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+G A+  K +P +I + L  D  D Q R+I+A F      + + ++Y+P G+   
Sbjct: 61  EKKGYSGTALYCKKKPKKITSGLGWDPADSQGRYIQADFDG----VSVASIYVPSGS-SG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EV 179
                 K  ++   +             IF  D+NI  +  D  N      ++ F   E 
Sbjct: 116 DEAQARKEVFMTNIMDHFKAMRRKRREFIFCADWNICHREVDIKNWRGNRKNSGFLPHER 175

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
                   ++G+ DA R  +     Y++W     +W+KN G R+D+ +++P     + SA
Sbjct: 176 AWLDSLFDDVGYADAFRVINQEEDQYTWWSNRGQAWAKNVGWRLDYQVVTPGLVDKIQSA 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIP 264
            I    R     SDH P I+  DI 
Sbjct: 236 SIYKDER----FSDHAPFIMDYDID 256


>gi|77163744|ref|YP_342269.1| exodeoxyribonuclease III xth [Nitrosococcus oceani ATCC 19707]
 gi|76882058|gb|ABA56739.1| Exodeoxyribonuclease III [Nitrosococcus oceani ATCC 19707]
          Length = 237

 Score =  181 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 80/241 (33%), Positives = 129/241 (53%), Gaps = 5/241 (2%)

Query: 21  LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80
           +  W++ + PD++ LQETK  D +FP E  + + YH    GQK+YNGVAIL +  P +I+
Sbjct: 1   MVDWLEIHQPDVLALQETKLVDDSFPQEAFKEIGYHAAYSGQKTYNGVAILCRQAPKDIL 60

Query: 81  THLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQ 140
           T LP      +         +    +R+ NLY+P+G+ + S KY  K+ W+ R   +  +
Sbjct: 61  TDLPNLVDSQRRIL-----GVTVDDIRLLNLYVPNGSEVGSKKYAYKLDWLGRIKDYLQE 115

Query: 141 RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHD 200
            L     LI  GD+N+ P   D ++P IW      +   R++ +++  +GF D+ R    
Sbjct: 116 ALVEYPKLIVLGDFNVAPADQDVHDPDIWHETILCSTPEREALKEILALGFQDSFRLFEQ 175

Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
               +S+WDY   ++ +N+G+RID I++S           ID +PR  T+PSDH PVI +
Sbjct: 176 EAQSFSWWDYRGGAFRRNRGLRIDLILISKALVPKCTGCVIDKEPRRLTRPSDHAPVIAT 235

Query: 261 L 261
            
Sbjct: 236 F 236


>gi|317124329|ref|YP_004098441.1| exodeoxyribonuclease III Xth [Intrasporangium calvum DSM 43043]
 gi|315588417|gb|ADU47714.1| exodeoxyribonuclease III Xth [Intrasporangium calvum DSM 43043]
          Length = 294

 Score =  181 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 59/270 (21%), Positives = 109/270 (40%), Gaps = 9/270 (3%)

Query: 1   MSVVTVATWNVNSIRARIHNLAA-WIKENNPDIICLQETKTEDKNFPFETLQSL--NYHI 57
           M+V+ V T NVN IRA I   AA WI +  PD++CLQE +  +        ++   ++H+
Sbjct: 27  MAVMRVITANVNGIRAAIRRGAAPWISQAAPDVLCLQEVRAGETELAKALAEAGLGHWHV 86

Query: 58  ETC--GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
                  K   GVA+ ++     +   + G       R++E   +     + + + Y+  
Sbjct: 87  AHTEGTVKGRAGVAVATREPHTAVRVGVEGA-FAEAGRWVEVDVSTPAGVVTVASTYVHT 145

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
           G    + +  +K  ++        +  +    ++  GD N+  +  D  N       + F
Sbjct: 146 GE-AGTGRQVEKQLFLDAMTGRLERAAQAGALMVVTGDLNVAHREDDLKNWKGNLRKSGF 204

Query: 176 TLEVRQSFQKLQNMGFTDAIRA--THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
             E R  F +  +      +           Y++W +   ++  + G RID+ + S    
Sbjct: 205 LPEERDYFDRWFDELAWVDVHRVLHGPGPGPYTWWSWRGKAFDNDAGWRIDYQLASASLA 264

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            L  SA +        + SDH PVIV  D+
Sbjct: 265 PLARSASVGRAESYAARWSDHAPVIVDYDL 294


>gi|161526271|ref|YP_001581283.1| exodeoxyribonuclease III Xth [Burkholderia multivorans ATCC 17616]
 gi|189349015|ref|YP_001944643.1| exodeoxyribonuclease III [Burkholderia multivorans ATCC 17616]
 gi|221214692|ref|ZP_03587662.1| exodeoxyribonuclease III [Burkholderia multivorans CGD1]
 gi|160343700|gb|ABX16786.1| exodeoxyribonuclease III Xth [Burkholderia multivorans ATCC 17616]
 gi|189333037|dbj|BAG42107.1| exodeoxyribonuclease III [Burkholderia multivorans ATCC 17616]
 gi|221165582|gb|EED98058.1| exodeoxyribonuclease III [Burkholderia multivorans CGD1]
          Length = 256

 Score =  181 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 63/264 (23%), Positives = 110/264 (41%), Gaps = 14/264 (5%)

Query: 3   VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59
           ++ V T N+N IR A       W+ E N D +C+QE K    + P E +       +   
Sbjct: 1   MMRVITANLNGIRSAAKKGFFDWLGEQNADCVCVQEIKVSADDLPAEFVAPHGLKSYFHH 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G  + S+ +P +++      + D + R++EA +      L + ++Y+P G+  
Sbjct: 61  AAKKGYSGAGLYSRREPDDVIIGFGSSEFDPEGRYVEARYG----KLSVVSVYVPSGSSG 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +                  L+    +I  GD NI+ +  D  N    + ++    E 
Sbjct: 117 DERQQA--KYRFMDEFMPHLAELKKTREVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEE 174

Query: 180 RQSFQK-LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R    K   ++G+ D  R        Y++W     +++KN G RID+ + +P   S   S
Sbjct: 175 RAWLSKLFDDVGYVDVFRTLDPRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGVASTAKS 234

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
             I        K SDH P+ V  D
Sbjct: 235 TSIFKDI----KFSDHAPLTVDYD 254


>gi|125972979|ref|YP_001036889.1| exodeoxyribonuclease III Xth [Clostridium thermocellum ATCC 27405]
 gi|256004776|ref|ZP_05429751.1| exodeoxyribonuclease III Xth [Clostridium thermocellum DSM 2360]
 gi|125713204|gb|ABN51696.1| exodeoxyribonuclease III Xth [Clostridium thermocellum ATCC 27405]
 gi|255991226|gb|EEU01333.1| exodeoxyribonuclease III Xth [Clostridium thermocellum DSM 2360]
 gi|316940785|gb|ADU74819.1| exodeoxyribonuclease III Xth [Clostridium thermocellum DSM 1313]
          Length = 251

 Score =  181 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 70/262 (26%), Positives = 115/262 (43%), Gaps = 13/262 (4%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           +  + +WNVN +RA I      + K+ + DI C+QE+K +      E L   + +     
Sbjct: 1   MTKLISWNVNGLRACINKGFLDYFKKADADIFCIQESKVQPGQIELE-LDGYHQYWNYAE 59

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G A+ ++ +P+ +   +  D+ D + R I   F           + +   N    
Sbjct: 60  RKGYSGTAVFTRIKPLCVQNGIGIDEHDREGRVITLEFDNY------YLVNVYTPNAKKE 113

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            +  D     +   R     L+ ++P+I  GD N+  +  D  NP      A FT E R 
Sbjct: 114 LERLDYRMKWEDDFRNYLVGLKAKKPVIVCGDMNVAHKEIDLKNPESNRRSAGFTDEERA 173

Query: 182 SFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            F +L N GF D  R  +      Y++W Y  ++ ++N G RID+  +S E    L SA 
Sbjct: 174 KFTELLNAGFIDTFRFFYPDKTGAYTWWSYMFNARARNAGWRIDYFCVSEELKDRLVSAS 233

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I     G    SDH PV + + 
Sbjct: 234 IHDDVMG----SDHCPVELQIK 251


>gi|327438448|dbj|BAK14813.1| exonuclease III [Solibacillus silvestris StLB046]
          Length = 252

 Score =  181 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 63/261 (24%), Positives = 115/261 (44%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN IRA +      + +E + D  CLQETK +      + L+    +  +  +
Sbjct: 1   MKFISWNVNGIRACVNKGFLDYFREMDADFFCLQETKCQVGQIDLQ-LEGYYQYWHSAVK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G A+ +K++P+ +   +  +    + R +   +        + N Y P+     + 
Sbjct: 60  KGYSGTAVFTKHEPLAVYYGIENEIAADEGRILTLEYE----NFYLVNTYTPNAKRDLTR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
             +      +  +R   + L+ ++P+I+ GD N+     D  N      ++ FT E R  
Sbjct: 116 LEERL--LWEDRMRIYLKELDAKKPVIYCGDLNVAHSELDIKNVKSNIGNSGFTYEERGK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
              L   GFTD  R  H      +++W Y A    +N G RID+ ++S      +  A I
Sbjct: 174 MTDLLTSGFTDTFRHFHPDVTDHFTWWSYMAKVRERNIGWRIDYFIISDRLVEKVEEASI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            ++  G    SDH P+++ L 
Sbjct: 234 HSEILG----SDHCPIVLKLK 250


>gi|288929660|ref|ZP_06423504.1| exodeoxyribonuclease III [Prevotella sp. oral taxon 317 str. F0108]
 gi|288329165|gb|EFC67752.1| exodeoxyribonuclease III [Prevotella sp. oral taxon 317 str. F0108]
          Length = 249

 Score =  181 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 65/257 (25%), Positives = 105/257 (40%), Gaps = 12/257 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +  +     K  + D  CLQETK +      +     +       +
Sbjct: 1   MKFISWNVNGLRAVVGKDFENTFKALDADFFCLQETKMQAGQLDLQ-FDGYDSFWNYADK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI ++++P+ +   +  D  D + R I                       +   
Sbjct: 60  KGYSGTAIYTRHKPLNVSYGIGIDQHDHEGRVITLEMPTFFLVTVYTPNSQEELRRLDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +   +     L+  +P+I  GD N+  Q  D  NP     +A FT E RQ 
Sbjct: 120 MQ------WEDDFQAYLHNLDKCKPVIVCGDMNVAHQEIDLKNPKTNRRNAGFTDEERQK 173

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
             +L + GFTD  R  +     YS+W Y   +  +N G RID+ ++S    + +  A+I 
Sbjct: 174 MTQLLDAGFTDTFRWKYPEEVTYSWWSYRFKARERNTGWRIDYFLVSNRLQAEVLDAKIH 233

Query: 243 TKPRGWTKPSDHTPVIV 259
           T   G    SDH PV +
Sbjct: 234 TDILG----SDHCPVEL 246


>gi|229191862|ref|ZP_04318833.1| Exodeoxyribonuclease [Bacillus cereus ATCC 10876]
 gi|228591624|gb|EEK49472.1| Exodeoxyribonuclease [Bacillus cereus ATCC 10876]
          Length = 252

 Score =  181 bits (458), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 68/262 (25%), Positives = 121/262 (46%), Gaps = 14/262 (5%)

Query: 4   VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + +WNVN +RA         +++E++ DI CLQE K ++       L+    +     
Sbjct: 1   MKLISWNVNGLRAVIAKGGFLEYLEESSADIFCLQEIKLQEGQIDLN-LEGYYTYWNYAV 59

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G AI SK +P+ +   L  ++ D + R I   F                 +    
Sbjct: 60  KKGYSGTAIFSKKEPLSVTYGLDIEEHDQEGRLITLEFEDFYMI-----TLYTPNSKRGL 114

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            + D ++ W   F  +  + L+ ++P+IF GD N+  +  D  NP     +  F+ E R+
Sbjct: 115 ERLDYRMKWEDDFRSYIKR-LDEKKPVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEERE 173

Query: 182 SFQKLQNMGFTDAIRATHDTHH-LYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            F  +   GFTD  R  +      YS+W Y   + +KN G R+D+ ++S      +  A+
Sbjct: 174 KFSCILEEGFTDTYRYLYPDQESAYSWWSYRMGARAKNIGWRLDYFVVSERMKDQITEAK 233

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I+++  G    SDH PV + ++
Sbjct: 234 INSEVMG----SDHCPVELHIN 251


>gi|254166764|ref|ZP_04873618.1| exodeoxyribonuclease III [Aciduliprofundum boonei T469]
 gi|289596498|ref|YP_003483194.1| exodeoxyribonuclease III [Aciduliprofundum boonei T469]
 gi|197624374|gb|EDY36935.1| exodeoxyribonuclease III [Aciduliprofundum boonei T469]
 gi|289534285|gb|ADD08632.1| exodeoxyribonuclease III [Aciduliprofundum boonei T469]
          Length = 255

 Score =  180 bits (457), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 71/266 (26%), Positives = 120/266 (45%), Gaps = 14/266 (5%)

Query: 1   MSVVTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           M ++ + +WNVN IRA +      ++++  PDI+ LQE K  + N P E     +YH   
Sbjct: 1   MELL-LISWNVNGIRACVRNGFLDFLEKYKPDILALQEIKATEDNIPIEVRYYPDYHKYW 59

Query: 60  CG--QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
               +K Y G A+ +K +P+ I   +  D  D + R I A +        + N Y P+  
Sbjct: 60  NPAKKKGYAGTALFTKIEPLNIKFGIGEDKFDSEGRVITAEYE----KFYLVNAYFPNSQ 115

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
              +    D      + +      L  ++P+I  GD+N+  +  D  NP     +A FT 
Sbjct: 116 HGLTRL--DFKIEFDKLIHSYLNELRKKKPVILCGDFNVAHKEIDLANPKQNVKNAGFTP 173

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
           + R    +    G+ D  R        Y++W Y   +  +N G R+D+ ++S E    + 
Sbjct: 174 QERAWMDEFLQDGYIDTFRMFTKEGGHYTWWTYRFKARERNIGWRVDYFVVSEELKDKVK 233

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263
           S+ I ++  G    SDH P+ + LDI
Sbjct: 234 SSWILSEVYG----SDHAPIAMVLDI 255


>gi|149180849|ref|ZP_01859351.1| exodeoxyribonuclease [Bacillus sp. SG-1]
 gi|148851368|gb|EDL65516.1| exodeoxyribonuclease [Bacillus sp. SG-1]
          Length = 253

 Score =  180 bits (457), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 70/261 (26%), Positives = 121/261 (46%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN IRA +      + K+ + DI C+QE+K ++     + L++ + +     +
Sbjct: 1   MKIVSWNVNGIRACVKKGFMDFFKDVDADIFCIQESKLQEGQIQLD-LENYHQYWNYAER 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G A+ +K +P+ +   +  DD + + R I   F        + N+Y P+     S 
Sbjct: 60  KGYSGTAVFTKQEPLSVSYGIGEDDDEPEGRCITLEFE----DFYLLNVYTPNSKRDLSR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
             D         +R   + L+  +P+I+ GD N+     D  NP     ++ FT E R+ 
Sbjct: 116 LEDRLHWE--ERVRAYIKELDEIKPVIYCGDLNVAHNEIDLRNPKSNHGNSGFTTEEREK 173

Query: 183 FQKLQNMGFTDAIRATHDTHHL-YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
              L N GF D+ R  +      Y++W Y +    +N G RID+ ++S      L  A +
Sbjct: 174 MSTLLNEGFVDSFRHLYPEKDQSYTWWSYMSKVRERNIGWRIDYFIVSDRLKDSLKDAGM 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            T   G    SDH PV + +D
Sbjct: 234 HTDVLG----SDHCPVYIEID 250


>gi|313892072|ref|ZP_07825670.1| exodeoxyribonuclease III [Dialister microaerophilus UPII 345-E]
 gi|313119524|gb|EFR42718.1| exodeoxyribonuclease III [Dialister microaerophilus UPII 345-E]
          Length = 254

 Score =  180 bits (457), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 72/264 (27%), Positives = 121/264 (45%), Gaps = 13/264 (4%)

Query: 1   MSVVTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           M+ +   +WNVN +RA I        K  N D  CLQETK +        +     +  +
Sbjct: 1   MNNLKYISWNVNGLRACIKKGFLDSFKNLNADCFCLQETKLQPHQIELN-IPGYYQYWNS 59

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G A+ +K +PI +   +  ++ D + R I A F  +   +          +  
Sbjct: 60  AIKKGYSGTALFTKIKPISVSYGMNIEEHDQEGRLITAEFENHFLVV-----CYTPNSQR 114

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              + + ++ W   F  +  + L   +P+I  GD N+  +  D  NP     +A FT + 
Sbjct: 115 QLARLEYRMKWENDFKNYLLK-LTESKPVILCGDLNVAHKEIDLANPSSNHKNAGFTDDE 173

Query: 180 RQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R+ F  L   GFTD  R  +      YS+W Y+A S  +N G RID+ ++S +  + +  
Sbjct: 174 RKKFSTLLENGFTDTFRYLYPDKKDAYSWWSYFAKSRERNIGWRIDYFLVSDKLKNKIKD 233

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
           A+I  + +G    SDH PV ++ D
Sbjct: 234 AKIHPEIQG----SDHCPVELTFD 253


>gi|49478354|ref|YP_037804.1| exodeoxyribonuclease III [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|301055229|ref|YP_003793440.1| exodeoxyribonuclease III [Bacillus anthracis CI]
 gi|49329910|gb|AAT60556.1| exodeoxyribonuclease III [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|300377398|gb|ADK06302.1| exodeoxyribonuclease III [Bacillus cereus biovar anthracis str. CI]
          Length = 252

 Score =  180 bits (457), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 67/262 (25%), Positives = 123/262 (46%), Gaps = 14/262 (5%)

Query: 4   VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           +   +WNVN +RA         +++E+N DI C+QE K ++        +    +     
Sbjct: 1   MKFISWNVNGLRAVIAKGGFLEYLEESNADIFCVQEIKLQEGQIDLNV-EGYYTYWNYAV 59

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G AI SK +P+ +   L  ++ D + R I   F        I  LY P+ +    
Sbjct: 60  KKGYSGTAIFSKKEPLSVTYGLGIEEHDQEGRVITLEFE----DFYIITLYTPN-SKRGL 114

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            + + ++ W   F  +  + L+ ++ ++F GD N+  +  D  NP     +  F+ E R+
Sbjct: 115 ERLEYRMKWEDDFRAYIKR-LDEKKSVVFCGDLNVAHKEIDLKNPKSNRKNPGFSDEERE 173

Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            F  +   GF D  R  +      YS+W Y   + +KN G R+D+ ++S      + +A+
Sbjct: 174 KFTCILEEGFIDTYRYLYPDQEGAYSWWSYRMGARAKNIGWRLDYFVVSERMKDQITAAK 233

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I+++  G    SDH PV + ++
Sbjct: 234 INSEVMG----SDHCPVELHIN 251


>gi|158298437|ref|XP_318609.4| AGAP009587-PA [Anopheles gambiae str. PEST]
 gi|157013880|gb|EAA14571.4| AGAP009587-PA [Anopheles gambiae str. PEST]
          Length = 606

 Score =  180 bits (457), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 70/262 (26%), Positives = 113/262 (43%), Gaps = 13/262 (4%)

Query: 5   TVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET-CGQ 62
            +++WNV  +R+ +      +I+   PDI+C+QETK  +   P E      YH    C  
Sbjct: 355 KISSWNVAGLRSWVGKGGLEFIEHEKPDILCVQETKCTEDQMPDEARHIKGYHPYWLCKP 414

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
             + GVAI SK  P  +   L  ++ D   R + A +        +  +Y+P+      T
Sbjct: 415 GGHAGVAIYSKKMPFHVAYGLGDEEQDQDGRLLTAEYE----KFYLVCVYVPNAGRKLVT 470

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                            + L+ ++P+I  GD N+  +  D  NP   + +A FT E R+ 
Sbjct: 471 LPKRLRWN--EKFHQYLRDLDAKKPVILCGDMNVAHEEIDLANPKTNKKNAGFTPEEREG 528

Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             +L + GF D  R  +      Y+FW Y   + +KN G R+D+ + S      +    I
Sbjct: 529 MTELLSYGFVDTFRKLYPDRTGAYTFWTYMGGARAKNVGWRLDYFITSERLAGKVTDNVI 588

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
               R     SDH PV + L+I
Sbjct: 589 ----RSQVFGSDHCPVTLFLNI 606


>gi|45358575|ref|NP_988132.1| exodeoxyribonuclease III Xth [Methanococcus maripaludis S2]
 gi|44921333|emb|CAF30568.1| exonuclease III [Methanococcus maripaludis S2]
          Length = 249

 Score =  180 bits (457), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 70/260 (26%), Positives = 119/260 (45%), Gaps = 12/260 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN IRA +      +++  +PDI+C+QETK +        L     +     +
Sbjct: 1   MKMLSWNVNGIRACLKNGFMNFLERESPDIMCIQETKVQSGQVQL-GLDGYFQYWNYAER 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +P  ++  +   + + + R I   F                 +    T
Sbjct: 60  KGYSGTAIFTKIKPNNVILGMENSEHNNEGRVITLEFDE-----YYLVNVYTPNSQRGLT 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           + + +  W + FL +    LE ++P++F GD N+  +  D  NP     +A FT E R  
Sbjct: 115 RLEYRQKWDEDFLSYIKT-LETKKPVVFCGDLNVAHKEIDLKNPKTNVKNAGFTPEERNG 173

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F  + N GF D  R  ++    YS+W Y  ++ ++N G RID+  +S    + L  A I 
Sbjct: 174 FDNIVNSGFLDTFREFNNEPDNYSWWSYRFNARARNIGWRIDYFCISKSLRNNLKDAYIM 233

Query: 243 TKPRGWTKPSDHTPVIVSLD 262
            +  G    SDH PV +  +
Sbjct: 234 PEVMG----SDHCPVGIIFE 249


>gi|224418520|ref|ZP_03656526.1| exodeoxyribonuclease LexA [Helicobacter canadensis MIT 98-5491]
 gi|253826925|ref|ZP_04869810.1| exodeoxyribonuclease LexA [Helicobacter canadensis MIT 98-5491]
 gi|313142047|ref|ZP_07804240.1| exodeoxyribonuclease LexA [Helicobacter canadensis MIT 98-5491]
 gi|253510331|gb|EES88990.1| exodeoxyribonuclease LexA [Helicobacter canadensis MIT 98-5491]
 gi|313131078|gb|EFR48695.1| exodeoxyribonuclease LexA [Helicobacter canadensis MIT 98-5491]
          Length = 252

 Score =  180 bits (457), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 73/261 (27%), Positives = 119/261 (45%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      + +  N D+ C+QE+K + +   F+   +   +  +  +
Sbjct: 1   MKLISWNVNGLRACMNKGFMDFFETVNADVFCIQESKMQREQATFD-FPNYEEYWNSAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+GVAI SK +P+ +   +     D + R I A +        + N+Y P+       
Sbjct: 60  KGYSGVAIFSKTKPLSVAYDMGIAHHDKEGRIICAEYK----DFYLVNVYTPNSKRELER 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +   R   + LE  +P+I  GD N+  Q  D  NP     +A FT E R+ 
Sbjct: 116 L--SYRMEWEDDFRAYLKNLEKTKPVIVCGDLNVAHQEIDLKNPKTNRRNAGFTDEEREK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             +L + GFTD  R  + T    YS+W Y   +   N G RID+ + S    S L  A+I
Sbjct: 174 MTQLLDSGFTDTFRHFYPTLEGAYSWWSYMGKARENNTGWRIDYFLCSKALDSKLLDAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
             +  G    SDH PV + ++
Sbjct: 234 YPEVFG----SDHCPVGLEIN 250


>gi|221201880|ref|ZP_03574917.1| exodeoxyribonuclease III [Burkholderia multivorans CGD2M]
 gi|221207614|ref|ZP_03580622.1| exodeoxyribonuclease III [Burkholderia multivorans CGD2]
 gi|221172460|gb|EEE04899.1| exodeoxyribonuclease III [Burkholderia multivorans CGD2]
 gi|221178300|gb|EEE10710.1| exodeoxyribonuclease III [Burkholderia multivorans CGD2M]
          Length = 256

 Score =  180 bits (457), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 62/264 (23%), Positives = 110/264 (41%), Gaps = 14/264 (5%)

Query: 3   VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59
           ++ V T N+N IR A       W+ E N D +C+QE K    + P E +       +   
Sbjct: 1   MMRVITANLNGIRSAAKKGFFDWLGEQNADCVCVQEIKVSADDLPAEFVAPHGLKSYFHH 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G  + S+ +P +++      + D + R++EA +      L + ++Y+P G+  
Sbjct: 61  AAKKGYSGAGLYSRREPDDVIIGFGSSEFDPEGRYVEARYG----KLSVVSVYVPSGSSG 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +                  L+    +I  GD NI+ +  D  N    + ++    E 
Sbjct: 117 DERQQA--KYRFMDEFMPHLAALKKTREVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEE 174

Query: 180 RQSFQK-LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R    K   ++G+ D  R        Y++W     +++KN G RID+ + +P   +   S
Sbjct: 175 RAWLSKLFDDVGYVDVFRTLDPRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGVAATAKS 234

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
             I        K SDH P+ V  D
Sbjct: 235 TSIFKDI----KFSDHAPLTVDYD 254


>gi|302560173|ref|ZP_07312515.1| exodeoxyribonuclease III [Streptomyces griseoflavus Tu4000]
 gi|302477791|gb|EFL40884.1| exodeoxyribonuclease III [Streptomyces griseoflavus Tu4000]
          Length = 276

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 55/273 (20%), Positives = 100/273 (36%), Gaps = 12/273 (4%)

Query: 1   MS----VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55
           MS    ++TV + NVN +RA        W+   + D++CLQE + E K  P    +   +
Sbjct: 1   MSYRSLMLTVTSVNVNGLRAAAKKGFVEWLAGTSADVLCLQEVRAEAKQLPETVREPEGW 60

Query: 56  HIETCGQ--KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
           H+       K   GV++ ++ +P  +      ++ D   R++E      T    +     
Sbjct: 61  HVVHAPAAAKGRAGVSLYTRREPDRVRVGFGSEEFDTAGRYVEVDLPGVTVA-SLYLPSG 119

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
             G      K      ++        +       ++  GD+NI  +  D  N       +
Sbjct: 120 EVGTERQDEKMRFMGEFLAHLKGLRERAAADGREVVVCGDWNIAHEKADLKNWRGNTKSS 179

Query: 174 CFTLEVRQSFQKLQN----MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
            F  E R+   ++ +               D    YS+W Y   ++  + G RID  + +
Sbjct: 180 GFLPEEREWLSRVLDPADGGYVDVVRALHPDVDGPYSWWSYRGRAFDNDTGWRIDLAVAT 239

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
           P        A ++       + SDH PV V  +
Sbjct: 240 PGLAGRAVKAYVERAATHAERWSDHAPVTVVFE 272


>gi|170703197|ref|ZP_02894004.1| exodeoxyribonuclease III Xth [Burkholderia ambifaria IOP40-10]
 gi|170131894|gb|EDT00415.1| exodeoxyribonuclease III Xth [Burkholderia ambifaria IOP40-10]
          Length = 257

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 59/264 (22%), Positives = 112/264 (42%), Gaps = 14/264 (5%)

Query: 3   VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59
           ++ V T N+N IR A       W+ E N D +C+QE K    + P + ++   +  +   
Sbjct: 1   MMRVITANLNGIRSAAKKGFFEWLGEQNADCVCVQEIKVSADDLPADFVEPHGFRSYFHH 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G  + S+++P +++      + D + R++EA +      L + ++Y+P G+  
Sbjct: 61  AEKKGYSGAGVYSRHEPDDVIIGFGSSEFDPEGRYVEARYG----KLSVVSVYVPSGSSG 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +                  L+ +  +I  GD NI+ +  D  N    + ++    E 
Sbjct: 117 EERQQA--KYRFMDEFMPHLAELKSKREVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEE 174

Query: 180 RQSFQK-LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R    +   ++G+ D  R        Y++W     +++KN G RID+ + +P        
Sbjct: 175 RAWLTQLFDDVGYVDVFRTLDPRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGVAGTAKR 234

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
             I        K SDH P+ V  D
Sbjct: 235 TSIFKDI----KFSDHAPLTVDYD 254


>gi|187251652|ref|YP_001876134.1| exodeoxyribonuclease III Xth [Elusimicrobium minutum Pei191]
 gi|186971812|gb|ACC98797.1| Exodeoxyribonuclease III Xth [Elusimicrobium minutum Pei191]
          Length = 255

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 63/262 (24%), Positives = 111/262 (42%), Gaps = 13/262 (4%)

Query: 5   TVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG-- 61
              +WNVN +RA        W  + +PDI+ LQETK   +         + YH       
Sbjct: 4   RFISWNVNGLRAVAKKGFMEWFTKESPDILALQETKASPEQLEGGLKNPIGYHSYFSTAE 63

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+GVA+ SK +P+ +   +    +D + R    T  +  +     N+Y P+G     
Sbjct: 64  RKGYSGVAVYSKEEPLSVSESIGNSTMDGEGR----TLVLEFKNFYFINIYFPNGGQGEH 119

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
               +            +Q+L  ++ +I  GD N   +  D   P   E +  F  + R 
Sbjct: 120 RI--EYKLRFYNEFLKLTQKLMKQKTVIVCGDVNTAHKETDLARPKENEGNTGFLPKERA 177

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
              K    G TD  R        Y++WDY   +  +N G RID+ M+   + + + ++ +
Sbjct: 178 WLDKFFENGLTDTFRLFTKDGGHYTWWDYKTKARERNVGWRIDYFMIDTLSKNKVKNSYM 237

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
             + +G    SDH P+ + +++
Sbjct: 238 LPEVQG----SDHCPIALEINL 255


>gi|218898840|ref|YP_002447251.1| exodeoxyribonuclease III [Bacillus cereus G9842]
 gi|218542018|gb|ACK94412.1| exodeoxyribonuclease III [Bacillus cereus G9842]
          Length = 252

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 68/262 (25%), Positives = 120/262 (45%), Gaps = 14/262 (5%)

Query: 4   VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + +WNVN +RA         +++E+N DI CLQE K +        L+    +     
Sbjct: 1   MKLISWNVNGLRAVIAKGGFLEYLEESNADIFCLQEIKVQSGQIDLN-LEGYYTYWNYAV 59

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G AI +K +P+ +   L  ++ D + R I   F                 +    
Sbjct: 60  KKGYSGTAIFTKKEPLSVTYGLEIEEHDQEGRLITLEFEDFYMI-----TLYTPNSKRGL 114

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            + D ++ W   F  +  + L+ ++P+IF GD N+  +  D  NP     +  F+ E R+
Sbjct: 115 ERLDYRMKWEDDFRSYIKR-LDEKKPVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEERE 173

Query: 182 SFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            F  +   GF D  R  + D    YS+W Y   + +KN G R+D+ ++S      +  A+
Sbjct: 174 KFTCILEEGFIDTYRYLYSDQEGAYSWWSYRMGARAKNIGWRLDYFVVSERMKDQITEAK 233

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I+++  G    SDH PV + ++
Sbjct: 234 INSEVMG----SDHCPVELHIN 251


>gi|281417190|ref|ZP_06248210.1| exodeoxyribonuclease III Xth [Clostridium thermocellum JW20]
 gi|281408592|gb|EFB38850.1| exodeoxyribonuclease III Xth [Clostridium thermocellum JW20]
          Length = 251

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 70/262 (26%), Positives = 115/262 (43%), Gaps = 13/262 (4%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           +  + +WNVN +RA I      + K+ + DI C+QE+K +      E L   + +     
Sbjct: 1   MTKLISWNVNGLRACINKGFLDYFKKADADIFCIQESKVQPGQIELE-LDGYHQYWNYAE 59

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G A+ ++ +P+ +   +  D+ D + R I   F           + +   N    
Sbjct: 60  RKGYSGTAVFTRIKPLYVQNGIGIDEHDREGRVITLEFDNY------YLVNVYTPNAKKE 113

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            +  D     +   R     L+ ++P+I  GD N+  +  D  NP      A FT E R 
Sbjct: 114 LERLDYRMKWEDDFRNYLVGLKAKKPVIVCGDMNVAHKEIDLKNPESNRRSAGFTDEERA 173

Query: 182 SFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            F +L N GF D  R  +      Y++W Y  ++ ++N G RID+  +S E    L SA 
Sbjct: 174 KFTELLNAGFIDTFRFFYPDKTGAYTWWSYMFNARARNAGWRIDYFCVSEELKDRLVSAS 233

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I     G    SDH PV + + 
Sbjct: 234 IHDDVMG----SDHCPVELQIK 251


>gi|320094719|ref|ZP_08026473.1| exodeoxyribonuclease III [Actinomyces sp. oral taxon 178 str.
           F0338]
 gi|319978361|gb|EFW09950.1| exodeoxyribonuclease III [Actinomyces sp. oral taxon 178 str.
           F0338]
          Length = 274

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 79/275 (28%), Positives = 126/275 (45%), Gaps = 21/275 (7%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSIRAR     A+++ +  D++ +QETK     FP E  +   YH+   G  
Sbjct: 1   MRIATWNVNSIRARAARATAFLERSGTDVLAMQETKCTPAQFPAEAFEEAGYHVAVHGLN 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL----------------R 107
            +NGVA+ S++  + +  H PG         +EA        +                 
Sbjct: 61  QWNGVAVASRHPILRVHDHFPGQPAFGDPAVVEARALGVVIDVSGALEGAPGSPAPAELT 120

Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEP--LIFAGDYNIIPQPHDCYN 165
           + +LY+P+G  +    Y  K+ W+      A   L+ +    +   GD+N+ PQ  D ++
Sbjct: 121 VWSLYVPNGRELDHPHYAYKLEWLAALRAQARGWLDADPAALVALVGDWNVAPQDQDVWD 180

Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225
              +E     +   R++F      G+ +A RA       Y++WDY    + KN+G+RID 
Sbjct: 181 MAAFEGATHVSAPEREAFAAFAEDGWIEATRA---RTTNYTYWDYQRLRFPKNEGMRIDF 237

Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
              SP   + + SARID   R     SDH PVI+ 
Sbjct: 238 AYASPALEARITSARIDRDERKGKGASDHVPVILD 272


>gi|325970995|ref|YP_004247186.1| exodeoxyribonuclease III Xth [Spirochaeta sp. Buddy]
 gi|324026233|gb|ADY12992.1| exodeoxyribonuclease III Xth [Spirochaeta sp. Buddy]
          Length = 250

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 68/261 (26%), Positives = 113/261 (43%), Gaps = 14/261 (5%)

Query: 4   VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      ++K++N DI CLQETK ++        +  + +     +
Sbjct: 1   MKLVSWNVNGLRAIQKKGFDEYLKQSNADIFCLQETKLQEDQISL-VTEGYHTYWSFAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G A+ SK +P+ +   +     +                    N         T  
Sbjct: 60  KGYSGTALFSKQEPVSVQRGIGHPLDNEGRTVTAEFEQFYVVCCYTPNSQEALARLDTRM 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
            +D          R     L   +P+I  GD N+  Q  D  +P   E +A +++E R  
Sbjct: 120 DWD-------EAFRSYVCSLASMKPVIICGDLNVAHQSIDLRHPKANERNAGYSIEERNQ 172

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F  L + GF D  R  +     +YS+W Y   +   N G RID+ ++S E    +  + I
Sbjct: 173 FTSLLDAGFIDTFRYLYPNREGIYSWWSYRFKARENNAGWRIDYWLVSEELRQSILDSTI 232

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
           DT+ +G    SDH PVI+ L+
Sbjct: 233 DTETQG----SDHAPVILYLN 249


>gi|297539760|ref|YP_003675529.1| exodeoxyribonuclease III Xth [Methylotenera sp. 301]
 gi|297259107|gb|ADI30952.1| exodeoxyribonuclease III Xth [Methylotenera sp. 301]
          Length = 262

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 62/264 (23%), Positives = 107/264 (40%), Gaps = 10/264 (3%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETC 60
           + + + N+N IR+     +  W++  N D++C+QE K +  +   E L    Y+      
Sbjct: 1   MKIISLNLNGIRSATNKGVQTWLQTQNADVVCMQEIKAQQADMTPEMLNPAGYYGYFHYA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GV I  K +P  ++  L G +  VQ    E  +                     
Sbjct: 61  EKKGYSGVGIYCKAKPDAVIEGLGGSNDGVQDIDSEGRYLECQFGNLSVISLYLPSGSSG 120

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   K S + RF+      ++    +I  GD+NI  +  D  N    + ++ F  E R
Sbjct: 121 EERQAFKFSVMTRFMLHMQALIKSGREIIICGDWNIAHKEADLKNYKGNKKNSGFLPEER 180

Query: 181 QSFQKLQNM-GFTDAIRATHDT--HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
                L +  G+ D  R  H       Y++W     +++KN G RID+ + +P   +   
Sbjct: 181 AWLTTLFDEVGWVDVYRTLHPNTTDECYTWWSNRGQAYAKNVGWRIDYQIATPAIAAKAV 240

Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261
           S  +    R     SDH P+IV  
Sbjct: 241 STSVYKAER----FSDHAPLIVEY 260


>gi|290959716|ref|YP_003490898.1| exodeoxyribonuclease III [Streptomyces scabiei 87.22]
 gi|260649242|emb|CBG72356.1| putative exodeoxyribonuclease III [Streptomyces scabiei 87.22]
          Length = 267

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 57/266 (21%), Positives = 102/266 (38%), Gaps = 8/266 (3%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++TV + NVN +RA        W+   + D++CLQE + E +  P    Q   +H+    
Sbjct: 1   MLTVTSVNVNGLRAAAKKGFVEWLAGTSADVVCLQEVRAEPEQLPEGVRQPEGWHVVHAP 60

Query: 62  Q--KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
              K   GV++ S+ +P  +       + D   R++EA     T    +       G   
Sbjct: 61  AAAKGRAGVSLYSRREPDRVRIGFGSAEFDGSGRYVEADLPGVTVA-SLYLPSGEVGTER 119

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K      ++        +       ++  GD+NI  Q  D  N    + ++ F  E 
Sbjct: 120 QDEKVRFMGEFLPYLKDLRERAAADGREVVVCGDWNIAHQQADLKNWRANQKNSGFLPEE 179

Query: 180 RQSFQKLQNM----GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
           R+   ++ +               +    YS+W Y   ++ ++ G RID  + +P   S 
Sbjct: 180 REWLGRVLDEGDGGYVDVVRALHPEVEGPYSWWSYRGRAFERDTGWRIDLAVATPGLASK 239

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
              A ++       + SDH PV V L
Sbjct: 240 AVKAFVERAASHDERWSDHAPVTVVL 265


>gi|258546221|ref|ZP_05706455.1| exodeoxyribonuclease III [Cardiobacterium hominis ATCC 15826]
 gi|258518646|gb|EEV87505.1| exodeoxyribonuclease III [Cardiobacterium hominis ATCC 15826]
          Length = 253

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 87/259 (33%), Positives = 130/259 (50%), Gaps = 7/259 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + +WNVNS+  R+ ++  ++KE  PDI+ LQE K  D       L +  YH+E+ GQK
Sbjct: 1   MNITSWNVNSLNVRLPHVLQYLKETAPDILGLQELKQTDAAIDRTALAAAGYHLESHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGVA+L++    ++V  +PG   +                +R+ NLY+P+G  +   K
Sbjct: 61  TYNGVALLAREALTDVVRGIPGYADEQARAIAANVGD-----VRVLNLYVPNGKAVGDEK 115

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ W+    R+          L+  GDYNI P   D ++P  W +    +   RQ+ 
Sbjct: 116 YTYKLHWLDAVTRYIDDLKREHPKLVIIGDYNIAPADLDVHDPDKWRDQILCSAPERQAL 175

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             L  +GF DA R  H     +S+WDY      +N G+RID  + S   T  L  A IDT
Sbjct: 176 ANLLALGFKDAYRTLHPDTQQFSWWDYRMGGLRRNIGLRIDLTLTSDALT--LADAGIDT 233

Query: 244 KPRGWTKPSDHTPVIVSLD 262
            PR W +PSDH P  V + 
Sbjct: 234 APRHWERPSDHAPAWVKIK 252


>gi|283796572|ref|ZP_06345725.1| exodeoxyribonuclease III [Clostridium sp. M62/1]
 gi|291075985|gb|EFE13349.1| exodeoxyribonuclease III [Clostridium sp. M62/1]
 gi|295092540|emb|CBK78647.1| exodeoxyribonuclease III [Clostridium cf. saccharolyticum K10]
 gi|295115277|emb|CBL36124.1| exodeoxyribonuclease III [butyrate-producing bacterium SM4/1]
          Length = 251

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 75/264 (28%), Positives = 117/264 (44%), Gaps = 15/264 (5%)

Query: 1   MSVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           M  +   +WNVN +RA +        ++ + DI C+QE+K +      + +     +   
Sbjct: 1   MKKM--ISWNVNGLRACVGKGFLDVFRKLDADIFCIQESKLQAGQIDLD-IPGYYQYWSY 57

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G A+ SK +PI +V  L  D  D + R I A +                 +  
Sbjct: 58  ADKKGYSGTALFSKEEPISVVYGLGIDAHDHEGRVITAEYED-----YYVLTCYTPNSQN 112

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +   ++ W   FL +  + LE ++P+IF GD N+  +  D  NP     +A FT E 
Sbjct: 113 ELARLPYRMEWEDAFLAYLKK-LEEKKPVIFCGDLNVAHREIDLKNPRTNRKNAGFTDEE 171

Query: 180 RQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R  F  L + GF D  R  +     +YS+W Y   +  KN G RID+  +S      L S
Sbjct: 172 RGKFSALLDAGFIDTYRHFYPDTEGVYSWWSYRFKAREKNAGWRIDYFCVSESLEDRLVS 231

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
           A I T+  G    SDH PV + + 
Sbjct: 232 ASIHTEIMG----SDHCPVELVIK 251


>gi|163854727|ref|YP_001629025.1| putative endonuclease [Bordetella petrii DSM 12804]
 gi|163258455|emb|CAP40754.1| putative endonuclease [Bordetella petrii]
          Length = 262

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 60/264 (22%), Positives = 108/264 (40%), Gaps = 9/264 (3%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59
           ++ + + N+N IR+     L  W++ ++ D++CLQE K  D +   +      Y  H   
Sbjct: 1   MLRITSINLNGIRSAFRKGLQPWMQTHSADVLCLQEIKISDADLTDDLRHPPGYTGHFCH 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GV +  +     +   L  ++ D + R I A +  N   +         G+  
Sbjct: 61  AIKKGYSGVGMYLRNTAERVQAGLNCEEFDAEGRIIRADWK-NLSVISAYLPSGSSGDER 119

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              KY     +         +  +     +  GD+NI  +  D  N    + ++ F  E 
Sbjct: 120 QQAKYRFLDVFGPWLDELMREHKKTGREFVICGDWNIAHKEIDLKNWKSNQKNSGFLPEE 179

Query: 180 RQSFQKLQN-MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R    ++ +  GF D  R   +    Y++W     +W+KN G RID+ + +P   +   S
Sbjct: 180 RAWLTEVFDKRGFVDVFRRLDERPEQYTWWSNRGQAWAKNVGWRIDYQIATPGLAARARS 239

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
           A I    R     SDH P+ +  D
Sbjct: 240 ASIYKDER----FSDHAPLTIDYD 259


>gi|229824704|ref|ZP_04450773.1| hypothetical protein GCWU000182_00052 [Abiotrophia defectiva ATCC
           49176]
 gi|229791033|gb|EEP27147.1| hypothetical protein GCWU000182_00052 [Abiotrophia defectiva ATCC
           49176]
          Length = 250

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 64/261 (24%), Positives = 111/261 (42%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +      +  + + D   LQE K  +     + L   + +     +
Sbjct: 1   MKYISWNVNGLRACLTKGFMDFFNKVDADAFGLQEIKLSEGQLELD-LPGYHKYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G A+ +K +PI +   +  D+ D + R I A +  +   +            +   
Sbjct: 60  KGYSGTALFTKKEPINVTYDMGIDEHDHEGRVITAEYEDHFFVVCYTPNAKQELERLDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +   R    +L+  +P+I  GD N+  +  D  NP     +A FT E R  
Sbjct: 120 M------VWEDDFRAYLNKLKESKPVILCGDLNVAHKEIDLKNPKTNRRNAGFTDEERGK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             +L + G+ D  R  +    ++YS+W Y   +  KN G RID+ + S +    L  A+I
Sbjct: 174 MTELLDAGYIDTFRFFYPELENVYSWWSYRFKAREKNTGWRIDYFITSDDFKDRLKDAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            ++  G    SDH PV +  D
Sbjct: 234 HSEILG----SDHCPVELDFD 250


>gi|75759849|ref|ZP_00739924.1| Exodeoxyribonuclease III [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|228902244|ref|ZP_04066404.1| Exodeoxyribonuclease [Bacillus thuringiensis IBL 4222]
 gi|228966664|ref|ZP_04127710.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|74492665|gb|EAO55806.1| Exodeoxyribonuclease III [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|228793040|gb|EEM40596.1| Exodeoxyribonuclease [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228857359|gb|EEN01859.1| Exodeoxyribonuclease [Bacillus thuringiensis IBL 4222]
          Length = 252

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 68/262 (25%), Positives = 120/262 (45%), Gaps = 14/262 (5%)

Query: 4   VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + +WNVN +RA         +++E+N DI CLQE K +        L+    +     
Sbjct: 1   MKLISWNVNGLRAVIAKGGFLEYLEESNADIFCLQEIKLQSGQIDLN-LEGYYTYWNYAV 59

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G AI +K +P+ +   L  ++ D + R I   F                 +    
Sbjct: 60  KKGYSGTAIFTKKEPLSVTYGLEIEEHDQEGRLITLEFEDFYMI-----TLYTPNSKRGL 114

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            + D ++ W   F  +  + L+ ++P+IF GD N+  +  D  NP     +  F+ E R+
Sbjct: 115 ERLDYRMKWEDDFRSYIKR-LDEKKPVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEERE 173

Query: 182 SFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            F  +   GF D  R  + D    YS+W Y   + +KN G R+D+ ++S      +  A+
Sbjct: 174 KFTCILEEGFIDTYRYLYSDQEGAYSWWSYRMGARAKNIGWRLDYFVVSERMKDQITEAK 233

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I+++  G    SDH PV + ++
Sbjct: 234 INSEVMG----SDHCPVELHIN 251


>gi|331702430|ref|YP_004399389.1| exodeoxyribonuclease III Xth [Lactobacillus buchneri NRRL B-30929]
 gi|329129773|gb|AEB74326.1| exodeoxyribonuclease III Xth [Lactobacillus buchneri NRRL B-30929]
          Length = 256

 Score =  180 bits (457), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 68/265 (25%), Positives = 116/265 (43%), Gaps = 13/265 (4%)

Query: 4   VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA + +  A   ++ + D  C+QETK ++     + L     +     +
Sbjct: 1   MKFISWNVNGLRAAVKHDFAETFQQLDADFFCIQETKMQEGQLELD-LPGYQQYFNYAER 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K+ P+ +   +  D+ D + R I   +        + +     G  +   
Sbjct: 60  KGYSGTAIFTKHAPMHVTYGINSDEFDHEGRAITLEYP---DFYLVTSYVPNSGAGLKRL 116

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
            +        +        L+ ++P+I  GD N+  +  +  NP    ++A FT E RQ 
Sbjct: 117 DFR---MGWNKAFYQYLTELDAKKPVILCGDLNVAHKEIELKNPQSNHHNAGFTDEERQD 173

Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F KL   GF D  R  +     +YS+W Y   S  +N G RID+ + S      +  ++I
Sbjct: 174 FTKLLKAGFMDTFRHFYPDQTDIYSWWSYRFHSRDRNAGWRIDYFVASNRLADQIEDSKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLDIPEP 266
            T   G    SDH PV +   +P P
Sbjct: 234 LTDVFG----SDHCPVELDTKLPRP 254


>gi|113866254|ref|YP_724743.1| exodeoxyribonuclease III [Ralstonia eutropha H16]
 gi|113525030|emb|CAJ91375.1| Exodeoxyribonuclease III [Ralstonia eutropha H16]
          Length = 258

 Score =  180 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 61/266 (22%), Positives = 117/266 (43%), Gaps = 13/266 (4%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IET 59
           ++ + + N+N IR+        W+ + + D++C+QE K ++ +     L    YH     
Sbjct: 1   MLRIISANLNGIRSASKKGFFDWMGKQDADMVCVQELKAQEADMTEAFLAPHGYHGFFHY 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GV + ++++P  +VT     + D + R++E    +    L + ++Y+P G+  
Sbjct: 61  AEKKGYSGVGLYTRHKPERVVTGFGNSEFDSEGRYVE----VQYPHLAVISVYVPSGSSG 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +   K  +++ FL    Q       ++  GD NI  +  D  N      ++ F  E 
Sbjct: 117 EERQLA-KFRFMEAFLPHLLQLKASGREIVLCGDVNIAHKEIDIKNWKGNLKNSGFLPEE 175

Query: 180 RQSFQKLQN-MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R    +L +  G+ D  R        Y++W     +++KN G RID+ + +P+       
Sbjct: 176 RAWIGELFDVHGYVDVFRKLDPRPEQYTWWSNRGQAYAKNVGWRIDYHLATPKIADTARL 235

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIP 264
             I        K SDH P+ +  D P
Sbjct: 236 CSIYKD----EKFSDHAPLSIDYDYP 257


>gi|66817330|ref|XP_642518.1| hypothetical protein DDB_G0277701 [Dictyostelium discoideum AX4]
 gi|161784257|sp|P51173|APEA_DICDI RecName: Full=DNA-(apurinic or apyrimidinic site) lyase; AltName:
           Full=Class II apurinic/apyrimidinic(AP)-endonuclease
 gi|60470608|gb|EAL68586.1| hypothetical protein DDB_G0277701 [Dictyostelium discoideum AX4]
          Length = 361

 Score =  180 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 69/263 (26%), Positives = 116/263 (44%), Gaps = 10/263 (3%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFE-TLQSLNYHIETCG 61
           + + +WNV   ++ +      ++++ NPD++CLQETK    N   +   +   YH     
Sbjct: 105 MKIISWNVAGFKSVLSKGFTEYVEKENPDVLCLQETKINPSNIKKDQMPKGYEYHFIEAD 164

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           QK ++G  +L+K +P  I   +     D + R I   +        I N Y+P+      
Sbjct: 165 QKGHHGTGVLTKKKPNAITFGIGIAKHDNEGRVITLEYD----QFYIVNTYIPNAGTRGL 220

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            + D +I       +   ++L   +P+I+ GD N+     D  NP   +  A FT+E R 
Sbjct: 221 QRLDYRIKEWDVDFQAYLEKLNATKPIIWCGDLNVAHTEIDLKNPKTNKKSAGFTIEERT 280

Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           SF      G+ D+ R  +      Y+FW Y     SKN G R+D+ ++S      +    
Sbjct: 281 SFSNFLEKGYVDSYRHFNPGKEGSYTFWSYLGGGRSKNVGWRLDYFVVSKRLMDSIK--- 337

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263
           I    R     SDH P+ V +D+
Sbjct: 338 ISPFHRTSVMGSDHCPIGVVVDL 360


>gi|317010103|gb|ADU80683.1| exodeoxyribonuclease III [Helicobacter pylori India7]
          Length = 250

 Score =  180 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 73/260 (28%), Positives = 119/260 (45%), Gaps = 13/260 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      +    + D+ C+QE+K + +   FE  +          +
Sbjct: 1   MKLVSWNVNGLRACMTKGFMDFFNSVDADVFCIQESKMQQEQNTFE-FKGYFDFWNCAIK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+GV   SK +P+ +   +  ++ D + R +   F     +  + N+Y P+     S 
Sbjct: 60  KGYSGVVTFSKKEPLSVSYGINIEEHDKEGRVVTCEFE----SFYLVNVYTPNSQQALSR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
             + ++SW   F +F    LEL++P+I  GD N+     D  NP     +A F+ E R  
Sbjct: 116 -LNYRMSWEVEFKKFLKA-LELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L N GF D  R  +      Y++W Y   +  KN G RID+ + S    + L  A I
Sbjct: 174 FSELLNAGFIDTFRYFYPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALI 233

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
                G    SDH PV + L
Sbjct: 234 YKDILG----SDHCPVGLEL 249


>gi|297380626|gb|ADI35513.1| exodeoxyribonuclease III [Helicobacter pylori v225d]
          Length = 250

 Score =  180 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 70/260 (26%), Positives = 116/260 (44%), Gaps = 13/260 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      +    + DI C+QE+K + +   FE  +          +
Sbjct: 1   MKLISWNVNGLRACMTKGFMDFFNSVDADIFCIQESKMQQEQNTFE-FKGYFDFWNCAIK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+GV   +K +P+ +   +  ++ D + R +   F +      + N+Y+P+     S 
Sbjct: 60  KGYSGVVTFTKKEPLSVSYGINIEEHDKEGRVVTCEFEL----FYLVNVYVPNSQQALSR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                   ++   R   + LEL++P+I  GD N+     D  NP     +A F+ E R  
Sbjct: 116 LSYRMSWEVE--FRKFLKALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L N GF D  R  +      Y++W Y   +  KN G RID+ + S    + L  A I
Sbjct: 174 FNELLNAGFIDTFRYFYPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALI 233

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
                G    SDH PV + L
Sbjct: 234 YKDILG----SDHCPVGLEL 249


>gi|327402657|ref|YP_004343495.1| exodeoxyribonuclease III Xth [Fluviicola taffensis DSM 16823]
 gi|327318165|gb|AEA42657.1| exodeoxyribonuclease III Xth [Fluviicola taffensis DSM 16823]
          Length = 254

 Score =  180 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 61/262 (23%), Positives = 101/262 (38%), Gaps = 10/262 (3%)

Query: 4   VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + ++NVN IRA    +    +KE   D+ICLQETK   +    ET+  L+Y      +
Sbjct: 1   MKLLSFNVNGIRAIAGKSFLTDMKEMQADVICLQETKATVEQV-LETVNPLDYPFVYANE 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
               G +  +    +E ++ +    +               +   I       G+ +   
Sbjct: 60  AGRKGYSGTAIISKVEPLSVVYDMGVSHHDEEGRVICAEYDKFYLITVYVPNSGSELLRL 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND-ACFTLEVRQ 181
            Y               + LE ++P++  GD+N+  +  D   P    N  A F  E   
Sbjct: 120 PYR---KTWDADFLSYLKNLEAKKPVVVCGDFNVAHKAIDLARPKANYNKSAGFMQEEID 176

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
                   G  D+ RA +     Y++W Y   +  KN G RID+ ++S      +  A I
Sbjct: 177 GMDAFTANGLVDSWRAKNGDEVKYTWWSYRGGAREKNVGWRIDYFLVSEGFVPKIKEATI 236

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
             +  G    SDH PV V L +
Sbjct: 237 HNEIFG----SDHCPVGVELSL 254


>gi|317011660|gb|ADU85407.1| exodeoxyribonuclease III [Helicobacter pylori SouthAfrica7]
          Length = 250

 Score =  180 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 73/260 (28%), Positives = 120/260 (46%), Gaps = 13/260 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      +    + DI C+QE+K + +   FE  +          +
Sbjct: 1   MKLISWNVNGLRACMTKGFMDFFNSVDADIFCIQESKMQQEQNTFE-FKGYFDFWNCAIK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+GV   +K +P+ +   +  ++ D + R +   F     +  + N+Y P+     S 
Sbjct: 60  KGYSGVVTFTKKEPLSVSYGINIEEHDKEGRVVTCEFE----SFYLVNVYTPNSQQALSR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
             + ++SW   F +F    LEL++P+I  GD N+     D  NP     +A F+ E R+ 
Sbjct: 116 -LNYRMSWEVEFKKFLKA-LELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L N GF D  R  +      Y++W Y   +  KN G RID+ + S    + L  A I
Sbjct: 174 FNELLNAGFIDTFRYFYPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALI 233

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
                G    SDH PV + L
Sbjct: 234 YKDILG----SDHCPVGLEL 249


>gi|225026087|ref|ZP_03715279.1| hypothetical protein EUBHAL_00328 [Eubacterium hallii DSM 3353]
 gi|224956574|gb|EEG37783.1| hypothetical protein EUBHAL_00328 [Eubacterium hallii DSM 3353]
          Length = 250

 Score =  180 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 65/258 (25%), Positives = 110/258 (42%), Gaps = 13/258 (5%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      + KE + DI C+QETK ++    F   +    +     +
Sbjct: 1   MKLISWNVNGLRACVKKGFEDFFKEADADIFCVQETKLQEGQIDFAP-EGYECYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G A+ +K  P+++   +  ++ D + R I   F                   +   
Sbjct: 60  KGYSGTAVFTKKHPLKVWNGIGMEEHDQEGRVITLEFEDFFFVTVYTPNSQSELKRLDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +   R   Q L+ E+P+I  GD N+  +  D  NP   + +A FT E R  
Sbjct: 120 M------KWEDDFREYLQELDKEKPVIMTGDLNVAHEEIDLKNPKTNKKNAGFTQEERNK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L   GF D+ R  +      Y++W Y   +  K+ G RID+ ++S      +  A I
Sbjct: 174 FTELLGAGFVDSFRYLNPELAGAYTWWSYRFKAREKDAGWRIDYFVVSERWKEKIEDAII 233

Query: 242 DTKPRGWTKPSDHTPVIV 259
                G    SDH P+ +
Sbjct: 234 YKTVMG----SDHCPIGL 247


>gi|260425499|ref|ZP_05779479.1| exodeoxyribonuclease III [Citreicella sp. SE45]
 gi|260423439|gb|EEX16689.1| exodeoxyribonuclease III [Citreicella sp. SE45]
          Length = 262

 Score =  180 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 86/268 (32%), Positives = 123/268 (45%), Gaps = 11/268 (4%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIET 59
           MS  T+ATWN+NS+R R   +   + E  PD++CLQE K+  +  P E  ++L Y HI  
Sbjct: 1   MS-FTLATWNINSVRLREALVCQLLTEEAPDVLCLQECKSPVEKIPLEAFRALGYGHIVA 59

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            GQK YNGVAILSK    ++           +    E         + + N Y+P G  I
Sbjct: 60  RGQKGYNGVAILSKLPIRDVGDRDFAQLGHARHVAAELENG-----VTVHNFYVPAGGDI 114

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEP--LIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
              + ++K      +L         E     I  GD NI P+  D ++          T 
Sbjct: 115 PDRELNEKFGQKLDYLAEMRDWFRAERFGKSILVGDLNIAPREDDVWSHKALLKVVSHTP 174

Query: 178 -EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSL 235
            EV    +  +   + D  R       LYS+W Y A  W   +KG R+DH+  +P+    
Sbjct: 175 VEVAALAETQEAGNWVDITRKDIPEGQLYSWWSYRARDWDTADKGRRLDHVWATPDIAGA 234

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            HS+RI    RGW KPSDH PV+ + D+
Sbjct: 235 GHSSRILRAARGWEKPSDHAPVLATFDL 262


>gi|229061336|ref|ZP_04198683.1| Exodeoxyribonuclease [Bacillus cereus AH603]
 gi|228717951|gb|EEL69596.1| Exodeoxyribonuclease [Bacillus cereus AH603]
          Length = 252

 Score =  180 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 68/262 (25%), Positives = 118/262 (45%), Gaps = 14/262 (5%)

Query: 4   VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + +WNVN +RA         +++E+N DI CLQE K +         +    +     
Sbjct: 1   MKLISWNVNGLRAVIAKGGFLEYLEESNADIFCLQEIKLQSGQIDLNP-EGYYTYWNYAV 59

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G AI +K +PI +   L  ++ D + R I   F                 +    
Sbjct: 60  KKGYSGTAIFTKKEPISVTYGLGIEEHDQEGRVITLEFDDFYMI-----TLYTPNSKRGL 114

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            + D ++ W   F  +  + L+ ++P+IF GD N+  +  D  NP     +  F+ E R+
Sbjct: 115 ERLDYRMEWEDDFRAYIKR-LDEKKPVIFCGDLNVAHKEVDLKNPKSNRKNPGFSDEERE 173

Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            F  +   GF D  R  +      YS+W Y   + +KN G R+D+ ++S      +  A+
Sbjct: 174 KFTCVLEAGFIDTYRYLYPDQEGAYSWWSYRMGARAKNIGWRLDYFVISERLEHKIIDAK 233

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I+++  G    SDH PV + +D
Sbjct: 234 INSEVMG----SDHCPVELHID 251


>gi|257870107|ref|ZP_05649760.1| exodeoxyribonuclease [Enterococcus gallinarum EG2]
 gi|257804271|gb|EEV33093.1| exodeoxyribonuclease [Enterococcus gallinarum EG2]
          Length = 261

 Score =  180 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 69/261 (26%), Positives = 113/261 (43%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA    N     +  + D  CLQETK +      + L     +     +
Sbjct: 12  MKFISWNVNGLRAIVKKNFLEAFETFDADFFCLQETKLQAGQIELD-LPGYTQYWNYAEK 70

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K   +     +  ++ D + R I   +                       
Sbjct: 71  KGYSGTAIFAKEPALAAHYGIGIEEHDAEGRVITLEYPEF-----FLVTCYTPNAQNELR 125

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           + D +++W   F  +    L+ ++P+I  GD N+  Q  D  N    + +A FT E R+ 
Sbjct: 126 RLDYRMTWEDAFRAY-LTDLKQQKPVILCGDLNVAHQNIDLKNWKTNQKNAGFTPEEREK 184

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F  L + GFTD  R  +     +YS+W Y  ++   N G RID+ ++S +    L  A+I
Sbjct: 185 FSTLLSAGFTDTFRYFYPDAEGIYSWWSYRFNARKNNAGWRIDYFVVSDDLNDRLVDAKI 244

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            T+  G    SDH PV + L+
Sbjct: 245 HTEILG----SDHCPVELQLN 261


>gi|229098205|ref|ZP_04229152.1| Exodeoxyribonuclease [Bacillus cereus Rock3-29]
 gi|228685103|gb|EEL39034.1| Exodeoxyribonuclease [Bacillus cereus Rock3-29]
          Length = 252

 Score =  180 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 64/262 (24%), Positives = 119/262 (45%), Gaps = 14/262 (5%)

Query: 4   VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + +WNVN +RA         +++E+N DI CLQE K +         +    +     
Sbjct: 1   MKLISWNVNGLRAVIAKGGFLEYLEESNADIFCLQEIKLQSGQIDLNP-EGYYTYWNYAV 59

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G AI  K +P+ +   L  ++ D + R I   F  +   + +       G     
Sbjct: 60  KKGYSGTAIFMKKEPLSVTYGLGIEEHDQEGRVITLEFE-DFYMITLYTPNSKRGLERLD 118

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            + +      +   R   ++L+ ++P++F GD N+  +  D  NP     +  F+ E R+
Sbjct: 119 YRME-----WEDDFRTYIKQLDEKKPVVFCGDLNVAHKEIDLKNPKSNRKNPGFSDEERE 173

Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            F ++   GF D  R  +      YS+W Y   + +KN G R+D+ ++S      +  A+
Sbjct: 174 KFTRILEEGFVDTYRHLYPNQEGAYSWWSYRMGARAKNIGWRLDYFVVSERIKGQITDAK 233

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I+++  G    SDH PV + ++
Sbjct: 234 INSEIMG----SDHCPVELHIN 251


>gi|40063316|gb|AAR38134.1| exodeoxyribonuclease III [uncultured marine bacterium 578]
          Length = 254

 Score =  180 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 58/263 (22%), Positives = 105/263 (39%), Gaps = 12/263 (4%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCG 61
           + + T NVN IRA       +W+K+ N D++CLQE K ++            Y +  +  
Sbjct: 1   MRIITINVNGIRAAERKGFFSWLKKQNADVVCLQEIKAQEDQLDERFYPPSMYTYYHSAE 60

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G  +  K +P  +      D              ++  ++ + +           
Sbjct: 61  RKGYSGTGLYCKSKPDRVAYSPWEDINSEGRIIQADFGELSVISIYLPSGSSKEERQAFK 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            ++        RFL    +  +     I  GD+NI  +  D  N    + ++ F  E R 
Sbjct: 121 MEF-----ITDRFLPHLRKLQKDGRKYIICGDWNIAHKKIDLKNWRSNQKNSGFLPEERA 175

Query: 182 SFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
               L +  G+ D+ R  +     Y++W     +W  N G R+D+ ++S     L  S  
Sbjct: 176 WLDTLYDEVGYIDSFREINYDEFQYTWWSNRGQAWLNNTGWRLDYQVVSSNLAGLASSCE 235

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263
           I  K R     SDH+P+I+  ++
Sbjct: 236 IYKKER----FSDHSPLIIDYNL 254


>gi|306820340|ref|ZP_07453979.1| exodeoxyribonuclease III [Eubacterium yurii subsp. margaretiae ATCC
           43715]
 gi|304551669|gb|EFM39621.1| exodeoxyribonuclease III [Eubacterium yurii subsp. margaretiae ATCC
           43715]
          Length = 251

 Score =  180 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 73/262 (27%), Positives = 115/262 (43%), Gaps = 13/262 (4%)

Query: 4   VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA R        K  + D  CLQE K ++     +     +Y      +
Sbjct: 1   MKFVSWNVNGLRAAREKGFDEIFKNFDADFFCLQEIKLQEGQIDMDMDGYYSY-WNYAKR 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI ++ +PI++   L  ++ D + R I   +        +  +Y P+       
Sbjct: 60  KGYSGTAIFTRIEPIDVFYGLGKEEHDDEGRLITLEYP----EFYVSTVYTPNSKQELLR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
             D +  W   F  F    L+ ++P+I  GD N+  +  D  NP     +  FT E R+ 
Sbjct: 116 -LDYRQEWEDEFREFFKN-LDAKKPVIICGDMNVAHKEIDLKNPKTNRKNPGFTDEEREK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F  L + GFTD  R  +    + YS+W Y  ++   N G RID+ ++S      L +A I
Sbjct: 174 FTLLLDAGFTDTFRYFYPDKENEYSWWSYRFNARKNNTGWRIDYFLVSDRLQEKLTAASI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
                G    SDH PV V L +
Sbjct: 234 HQDVFG----SDHCPVSVELSL 251


>gi|304390659|ref|ZP_07372612.1| exodeoxyribonuclease III [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
 gi|315654251|ref|ZP_07907159.1| exodeoxyribonuclease III [Mobiluncus curtisii ATCC 51333]
 gi|304326415|gb|EFL93660.1| exodeoxyribonuclease III [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
 gi|315491286|gb|EFU80903.1| exodeoxyribonuclease III [Mobiluncus curtisii ATCC 51333]
          Length = 286

 Score =  180 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 69/286 (24%), Positives = 122/286 (42%), Gaps = 27/286 (9%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSIR R++ + A+++  N D++ +QE K  +  FP    ++  Y +   G  
Sbjct: 1   MRIATWNVNSIRTRVNRVTAFLERENIDVLAMQEIKCRNDQFPTLAFETAGYQVFVNGLN 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT---------INTQTLRIGNLYLP 114
            +NGVA+ ++      +          Q  F               +    +   +LY+P
Sbjct: 61  QWNGVAVAARQGISAHLLGTEFYGAIDQPYFSVPPKPPQLEPRVLGVRVAGVECWSLYVP 120

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPL--IFAGDYNIIPQPHDCYNPIIWEND 172
           +G  +    Y  K+ W+        + L+ +     ++ GD+N+ P+  D ++   +   
Sbjct: 121 NGREVGHLHYQYKLKWLDSLRSHVIRTLDTDPESLGLYLGDFNVAPRDEDVWDMADFAGA 180

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHD----------------THHLYSFWDYYADSWS 216
              +   RQ F KL +          HD                    +++WDY    W 
Sbjct: 181 THVSEPERQVFAKLLDPDTVADAVTLHDDLIEGLPGNLTEITRKFAPGWTYWDYQRARWR 240

Query: 217 KNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
           +N+G++ID  + +P   S +  A IDT  R   +PSDH PVIV  +
Sbjct: 241 RNQGMKIDFALATPRLVSRVTGAYIDTAERDGEQPSDHAPVIVDFE 286


>gi|218281326|ref|ZP_03487814.1| hypothetical protein EUBIFOR_00379 [Eubacterium biforme DSM 3989]
 gi|218217511|gb|EEC91049.1| hypothetical protein EUBIFOR_00379 [Eubacterium biforme DSM 3989]
          Length = 249

 Score =  180 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 68/261 (26%), Positives = 117/261 (44%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN IRA +       +   + DI C+QETK +      +       +I +  +
Sbjct: 1   MKCISWNVNGIRAVLKKDFVEILYALDADIFCIQETKAQPDQIEVDCELYPYQYINSAQK 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G  I  K +P+ I   +  ++ D + R I   +    +   +       G+ +   
Sbjct: 61  KGYSGTMIFCKEEPLSIRYGMNMEEHDTEGRVITLEYP---EYYVVTVYTPNSGDGLKRL 117

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
            Y  +         F++    L++P++  GD+N+  +  D  NP     +A FT E R S
Sbjct: 118 DYRMEWDK-----AFSAYLKSLDKPVMACGDFNVANEEIDIKNPKTNHKNAGFTDEERNS 172

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F++     F D  R+ +     YS+W Y   +  KN G RID+ ++SPE    +  A+I 
Sbjct: 173 FKENLLAYFVDTYRSLYPEKVEYSWWSYRFKAREKNAGWRIDYWLVSPELKDKIVDAKIL 232

Query: 243 TKPRGWTKPSDHTPVIVSLDI 263
           T   G    SDH PV + +++
Sbjct: 233 TDIYG----SDHCPVQLDIEV 249


>gi|291300710|ref|YP_003511988.1| exodeoxyribonuclease III Xth [Stackebrandtia nassauensis DSM 44728]
 gi|290569930|gb|ADD42895.1| exodeoxyribonuclease III Xth [Stackebrandtia nassauensis DSM 44728]
          Length = 265

 Score =  180 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 63/266 (23%), Positives = 107/266 (40%), Gaps = 6/266 (2%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IET 59
           ++TV T NVN IRA        W+ +   D++CLQE +  D+  P E      +H  +  
Sbjct: 1   MLTVTTANVNGIRAAARKGFVEWLSDTTADVVCLQEVRATDEQVPVEVRDVDGWHMIVAP 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
              K   GVA+LS+  P  +      ++ DV  R++E      T    +       G P 
Sbjct: 61  AADKGRAGVAVLSRETPARVQVGFGSEEFDVSGRYLEVDLPGVTVA-SLYLPSGETGTPR 119

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K      + +  +    +       ++  GD+NI  Q  D  N    +  A F  E 
Sbjct: 120 QDQKERFMAEFAEYLVALRKRAEADNRHVVICGDWNIAHQEIDLKNWKANKKTAGFLPEE 179

Query: 180 RQSFQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
           R+   ++ +       A R   +    YS+W Y   ++  + G RID+ + +P       
Sbjct: 180 REWMTRVFDDIGYVDVARRLHPEGPGPYSWWSYRGRAFDNDAGWRIDYHIATPGLAEAAK 239

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +A ++       + SDH PV V+  +
Sbjct: 240 TAVVERAATHDARWSDHAPVTVTYAV 265


>gi|317014940|gb|ADU82376.1| exodeoxyribonuclease III [Helicobacter pylori Gambia94/24]
          Length = 250

 Score =  180 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 69/260 (26%), Positives = 115/260 (44%), Gaps = 13/260 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      +    + D+ C+QE+K + +   FE  +          +
Sbjct: 1   MKLISWNVNGLRACMTKGFMDFFNSVDADVFCIQESKMQQEQNTFE-FKGYFDFWNCAIK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+GV   +K +P+ +   +   + D + R I   F     +  + N+Y P+     S 
Sbjct: 60  KGYSGVVTFTKKEPLSVSYGIDIKEHDKEGRVITCEFE----SFYLVNVYTPNSQQALSR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                   ++   +   + LEL++P+I  GD N+     D  NP     +A F+ E R+ 
Sbjct: 116 LSYRMNWEVE--FKKFLKALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L N GF D  R  +      Y++W Y   +  KN G RID+ + S    + L  A I
Sbjct: 174 FSELLNAGFIDTFRYFYPNKEKAYTWWSYMQQARDKNVGWRIDYFLCSNPLKTRLKDALI 233

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
                G    SDH PV + L
Sbjct: 234 YKDILG----SDHCPVGLEL 249


>gi|119503212|ref|ZP_01625296.1| exodeoxyribonuclease III [marine gamma proteobacterium HTCC2080]
 gi|119460858|gb|EAW41949.1| exodeoxyribonuclease III [marine gamma proteobacterium HTCC2080]
          Length = 259

 Score =  180 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 69/263 (26%), Positives = 115/263 (43%), Gaps = 13/263 (4%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC-- 60
           + V T N N IRA       +W+ + + D +C+QETK +             YH      
Sbjct: 1   MRVITCNTNGIRAAQRKGFFSWLSQQDADFVCIQETKAQIHQLDPALFAPEGYHCTYNDA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +  Y+G A+ S+ +P  +VT L  + +D Q R+++A F        + +LY+P G+   
Sbjct: 61  QKPGYSGTAVFSRIKPKTVVTKLGWEPMDSQGRYLQADFKG----FSVISLYVPSGS-SG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EV 179
               D K  ++++FL             I  GD+NI  +  D  N      ++ F   E 
Sbjct: 116 EAAQDRKEIFMEKFLPHLQALKRKRREFIICGDWNICHREIDLKNWRGNRKNSGFLPHER 175

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
               +    +G+ D  R  +     Y++W     +W+KN G R+D+++ +P   S   SA
Sbjct: 176 AWLDRVYDELGWVDVFRRINPNPDQYTWWSNRGQAWAKNVGWRLDYMLCTPGIASAGSSA 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
            I    R     SDH P+I+  D
Sbjct: 236 SIYRDER----FSDHAPLIIDFD 254


>gi|30250127|ref|NP_842197.1| exodeoxyribonuclease III:exodeoxyribonuclease III xth [Nitrosomonas
           europaea ATCC 19718]
 gi|30139234|emb|CAD86104.1| Exodeoxyribonuclease III:Exodeoxyribonuclease III xth [Nitrosomonas
           europaea ATCC 19718]
          Length = 257

 Score =  180 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 62/263 (23%), Positives = 112/263 (42%), Gaps = 13/263 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60
           + + T NVN +R+     L  W+     D+IC+QE K +  +          Y  +    
Sbjct: 1   MRIITLNVNGLRSAAGKGLFDWLPRQEADVICVQELKAQQGDINGVMRAPDGYSGYFHCA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GV + ++Y P +I+      ++D++ RF+   F      L + ++YLP G+   
Sbjct: 61  EKKGYSGVGLYTRYSPDQIIEGTGIPEIDMEGRFLRVDFG----NLTVISIYLPSGS-SG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   K  +++ FL       E    ++  GD+NI  +  D  N    + ++ F  E R
Sbjct: 116 EHRQAAKFFFMEHFLPLLQSLAECGREVLLCGDWNIAHKAIDLKNWRSNQKNSGFLPEER 175

Query: 181 QS-FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
                    +   D  R  +     Y++W     +W+KN G RID+ + +P   ++    
Sbjct: 176 AWLSTVFDELKLVDVFRKINPEPDQYTWWSNRGQAWAKNVGWRIDYQIATPGLAAMATGV 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
            I    R     SDH P+ +  D
Sbjct: 236 SIYKAER----FSDHAPLTIDYD 254


>gi|17544859|ref|NP_518261.1| putative exodeoxyribonuclease III protein [Ralstonia solanacearum
           GMI1000]
 gi|17427148|emb|CAD13668.1| putative exodeoxyribonuclease III protein [Ralstonia solanacearum
           GMI1000]
          Length = 261

 Score =  180 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 61/264 (23%), Positives = 113/264 (42%), Gaps = 12/264 (4%)

Query: 3   VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IET 59
           ++ + + N+N +R A       W+ + + D +C+QE K    +   E L    YH   + 
Sbjct: 1   MLRIISANLNGVRSAASKGFFEWMGKQDADFVCVQELKCAQDDMTPEFLAPHGYHGVFQH 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G  + +++QP +++    G + D + R++EA +      L I ++Y+P G+  
Sbjct: 61  AVKKGYSGAGLYARHQPDDVIVGFDGGEFDAEGRYVEARYG----KLSIISVYVPSGSSG 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +                 R E    ++  GD NI+ +  D  N    + ++    E 
Sbjct: 117 EERQQAKYRFMDLFMQHLTDLRHEKGREVVLCGDVNIVHKEIDIKNWKGNQKNSGCLPEE 176

Query: 180 RQSFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R    +L +  G+ D  R        Y++W     +++KN G RID+ + +P   +   S
Sbjct: 177 RAWLTRLFDEVGYVDVFRTLDPRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGIAATARS 236

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
             I        K SDH P+ V  D
Sbjct: 237 TSIFRDI----KFSDHAPLTVDYD 256


>gi|294625183|ref|ZP_06703825.1| exodeoxyribonuclease III [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|294666113|ref|ZP_06731371.1| exodeoxyribonuclease III [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292600502|gb|EFF44597.1| exodeoxyribonuclease III [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292604127|gb|EFF47520.1| exodeoxyribonuclease III [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 266

 Score =  180 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 66/273 (24%), Positives = 112/273 (41%), Gaps = 24/273 (8%)

Query: 4   VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + ++N N +R A      AW    + D++C+QETK ++            Y       
Sbjct: 1   MRIISFNANGLRSAASKGFFAWFAAQDADVLCVQETKAQEHQLAGPDFLPAGYKAWFRDA 60

Query: 62  --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GVAI S+++P E+ T L   + D + R+IEA F      L + + Y+P G+  
Sbjct: 61  STKKGYSGVAIYSRHEPDEVRTALGWPEFDEEGRYIEARFG----NLSVVSFYIPSGS-S 115

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              + D K   ++       + L      +  GD+NI+    D  N    + ++      
Sbjct: 116 GELRQDYKFQVMQWLRPILDEWLASGRQYVLCGDWNIVRTALDIKNWKSNQKNSGCLPPE 175

Query: 180 RQSFQKLQN-----------MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
           R     L              G+ D+ R  H     Y++W     + + N G RID+ ++
Sbjct: 176 RDWLNGLCADAPEDASAADGRGWVDSYRVLHPQGQDYTWWSNRGAARANNVGWRIDYQLV 235

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           +P     L +  I  + R     SDH P IV  
Sbjct: 236 TPGLRDTLKACSIYREER----FSDHAPYIVDY 264


>gi|21233269|ref|NP_639186.1| exodeoxyribonuclease III [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66770227|ref|YP_244989.1| exodeoxyribonuclease III [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|21115105|gb|AAM43077.1| exodeoxyribonuclease III [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66575559|gb|AAY50969.1| exodeoxyribonuclease III [Xanthomonas campestris pv. campestris
           str. 8004]
          Length = 266

 Score =  180 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 64/273 (23%), Positives = 110/273 (40%), Gaps = 24/273 (8%)

Query: 4   VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + ++N N +R A       W    + D++C+QETK ++            Y       
Sbjct: 1   MRIISFNANGLRSAASKGFFEWFATQDADVLCIQETKAQEHQLAGPEFLPAGYKAWFRDA 60

Query: 62  --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GVAI +K +P E+ T L   + D + R+IEA F      L + + Y+P G+  
Sbjct: 61  STKKGYSGVAIYAKREPDEVRTALGWPEFDEEGRYIEARFG----NLSVVSFYIPSGS-S 115

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +   K   ++      S+ L      +  GD+NI+    D  N    + ++      
Sbjct: 116 GELRQGYKFQVMEWLRPILSEWLASGRQYVLCGDWNIVRSALDIKNWKSNQKNSGCLPPE 175

Query: 180 RQSFQKLQN-----------MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
           R     L              G+ D+ R  H     Y++W     + + N G RID+ ++
Sbjct: 176 RDWLNGLCADLLDEADASNGRGWVDSYRVLHPQGEDYTWWSNRGAARANNVGWRIDYQLV 235

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           +P     + +  I  + R     SDH P IV  
Sbjct: 236 TPGLRDKVQACSIYREQR----FSDHAPYIVDY 264


>gi|218961468|ref|YP_001741243.1| Exonuclease III [Candidatus Cloacamonas acidaminovorans]
 gi|167730125|emb|CAO81037.1| Exonuclease III [Candidatus Cloacamonas acidaminovorans]
          Length = 256

 Score =  180 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 65/265 (24%), Positives = 109/265 (41%), Gaps = 14/265 (5%)

Query: 4   VTVA--TWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFET--LQSLNYHIE 58
           + +   +WNVN +RA +       I++  PDI+ +QETK ++   P E   L     +  
Sbjct: 1   MKLLLWSWNVNGLRAALNKGFIEIIQKEQPDILGIQETKLQEHQIPEELNTLNEYLIYWS 60

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
              +K Y+G  + +K  P+   T     + D + R   A +T       I          
Sbjct: 61  HSLRKGYSGTGLFTKLLPLSFSTGFGNPEFDNEGRINIAEYTEF-----IFFNIYFPNGQ 115

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
               + + K+ +  R L    ++    + ++  GD+N    P D  NP   E  + F   
Sbjct: 116 KDDERLNYKLRFYDRCLEVMEEKRTSGKIILVGGDFNTAHHPIDLANPKENEKTSGFLPI 175

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
            R    K+  MG+ D  R    +   Y++W Y   +  +N G R+D+  ++ E    +  
Sbjct: 176 ERAWLDKIAEMGWIDTFRYFDKSPEQYTWWSYRTKARPRNVGWRLDYFWVNKEGIEHIKK 235

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263
           A I     G    SDH PV V L+I
Sbjct: 236 AGIRQDIEG----SDHCPVFVELEI 256


>gi|163814023|ref|ZP_02205416.1| hypothetical protein COPEUT_00176 [Coprococcus eutactus ATCC 27759]
 gi|158450717|gb|EDP27712.1| hypothetical protein COPEUT_00176 [Coprococcus eutactus ATCC 27759]
          Length = 257

 Score =  180 bits (456), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 67/261 (25%), Positives = 106/261 (40%), Gaps = 13/261 (4%)

Query: 5   TVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
            + +WNVN IRA        +    + DI C+QE+K ++     +      Y      +K
Sbjct: 8   KLISWNVNGIRACAGKGFMDFFNSIDADIFCIQESKMQEGQLTLDMPGYYQY-WNYADKK 66

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            Y+G AI +K + +     +  D+ D + R I   +                   +    
Sbjct: 67  GYSGTAIFTKEKSLSETKGIGIDEHDHEGRVITLEYENFYMVTVYTPNSQNELARLDYRM 126

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
                   +   R   ++LE  +P+I  GD N+     D  NP     +A FT E R+  
Sbjct: 127 ------KWEDDFRAYLKKLEENKPVIVCGDMNVAHNEIDLKNPKTNRKNAGFTDEEREKM 180

Query: 184 QKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
             L + GF D  R  +    ++YS+W Y   +  KN G RID+ + S      L  A+I 
Sbjct: 181 TVLLDDGFIDTFRYFYPDQENIYSWWSYRFKAREKNAGWRIDYFLTSESLKDKLIDAKIH 240

Query: 243 TKPRGWTKPSDHTPVIVSLDI 263
           T   G    SDH PV + +D+
Sbjct: 241 TDIMG----SDHCPVELDIDM 257


>gi|91776834|ref|YP_546590.1| exodeoxyribonuclease III (xth) [Methylobacillus flagellatus KT]
 gi|91710821|gb|ABE50749.1| exodeoxyribonuclease III (xth) [Methylobacillus flagellatus KT]
          Length = 257

 Score =  179 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 75/265 (28%), Positives = 121/265 (45%), Gaps = 15/265 (5%)

Query: 3   VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IET 59
           ++ + + N+N IR A       W++E + DI+CLQE K ++ +   E LQ   Y+     
Sbjct: 1   MLRIISLNLNGIRSAASKGFYPWMQEQHADIVCLQELKAQEADMTAEMLQPEGYYGYFHY 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GV I S+ +   ++  L   D+D + R++EA +      L + +LYLP G+  
Sbjct: 61  ADKKGYSGVGIYSRKKADAVIVGLGMADIDSEGRYLEARYD----NLSVVSLYLPSGS-S 115

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +   K S + RF+      +     ++  GD+NI  Q  D  N      ++ F  E 
Sbjct: 116 GEERQAFKFSVMARFMPHLESLIRDGRDVVICGDWNIAHQEADLKNWRGNRKNSGFLPEE 175

Query: 180 RQSFQKLQNM-GFTDAIRATHDT--HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
           R     L    G+ D  R  H       Y++W     +W+KN G RID+ + +P   +  
Sbjct: 176 RAWLTDLFGRVGWVDVYRLLHPDTTDACYTWWSNRGQAWAKNVGWRIDYQVATPALAARA 235

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSL 261
            SA I    R     SDH P+IV  
Sbjct: 236 VSASIYKDAR----FSDHAPLIVDY 256


>gi|261838799|gb|ACX98565.1| exodeoxyribonuclease [Helicobacter pylori 51]
          Length = 250

 Score =  179 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 69/260 (26%), Positives = 115/260 (44%), Gaps = 13/260 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      +    + D+ C+QE+K + +   FE  +          +
Sbjct: 1   MKLISWNVNGLRACMTKGFMDFFNSVDADVFCIQESKMQQEQNTFE-FKGYFDFWNCAIK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+GV   +K +P+ +   +  D+ D + R +   F     +  + N+Y P+     S 
Sbjct: 60  KGYSGVVTFTKKEPLSVSYGINIDEHDKEGRVVTCEFE----SFYLVNVYTPNSQQALSR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                   ++   +   + LEL++P+I  GD N+     D  NP     +A F+ E R  
Sbjct: 116 LSYRMSWEVE--FKKFLKALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L N GF D  R  +      Y++W Y   +  KN G RID+ + S    + L  A I
Sbjct: 174 FNELLNAGFIDTFRYFYPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALI 233

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
                G    SDH PV + L
Sbjct: 234 YKDILG----SDHCPVGLEL 249


>gi|167585100|ref|ZP_02377488.1| exodeoxyribonuclease III Xth [Burkholderia ubonensis Bu]
          Length = 257

 Score =  179 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 61/264 (23%), Positives = 111/264 (42%), Gaps = 14/264 (5%)

Query: 3   VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59
           ++ V T N+N IR A       W+ E N D +C+QE K    + P E ++      +   
Sbjct: 1   MMRVITANLNGIRSAAKKGFFEWLGEQNADCVCVQEIKVSADDLPAEFVEPHGLRSYFHH 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G  + S+ +P +++      + D + R++EA +      L + ++Y+P G+  
Sbjct: 61  AEKKGYSGAGLYSRREPDDVIIGFGSSEFDSEGRYVEARYG----KLSVVSVYVPSGSSG 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +                  L+ +  +I  GD NI+ +  D  N    + ++    E 
Sbjct: 117 DERQQA--KYRFMDEFMPHLAELKKKREVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEE 174

Query: 180 RQSFQK-LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R    +   ++G+ D  RA       Y++W     +++KN G RID+ + +P        
Sbjct: 175 RAWLTQLFDDVGYVDVFRALDPRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGVAGTAKR 234

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
             I        K SDH P+ V  D
Sbjct: 235 TSIFKDI----KFSDHAPLTVDYD 254


>gi|296535508|ref|ZP_06897694.1| exodeoxyribonuclease III [Roseomonas cervicalis ATCC 49957]
 gi|296264163|gb|EFH10602.1| exodeoxyribonuclease III [Roseomonas cervicalis ATCC 49957]
          Length = 255

 Score =  179 bits (455), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 95/260 (36%), Positives = 138/260 (53%), Gaps = 6/260 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE-TCGQ 62
           + +A++NVNS+R R+ +L  +++   PD++ LQE K + + FP      L Y       Q
Sbjct: 1   MRLASFNVNSVRKRVPHLRRFLENAQPDLLFLQELKCKTEEFPAGEFTDLGYTSHAVGQQ 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
              NGVA+L +     +   LPG D D  AR++E T            +YLP+GN   + 
Sbjct: 61  GGRNGVAVLGRVPYEVVAEELPGGDGDTHARYVEVTAEGA----SFAGIYLPNGNSGGAE 116

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
            Y  K+ W++R    A  RL+   P    GD+N+ P   D     +   DA    E R  
Sbjct: 117 GYAYKLGWMRRLRALAQARLDAFTPYAILGDFNVCPTELDLAPGALPPTDALVRPETRAE 176

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F+ L N+G TDA+RA H    LY++WDY   ++  N+G+RIDH MLSPE    L  A +D
Sbjct: 177 FRALANLGLTDALRALHPGERLYTYWDY-GPAFEGNRGLRIDHAMLSPELAERLARAWVD 235

Query: 243 TKPRGWTKPSDHTPVIVSLD 262
           T PR   +PSDHTP++V L+
Sbjct: 236 TAPRSQEQPSDHTPLLVELE 255


>gi|302388430|ref|YP_003824252.1| exodeoxyribonuclease III [Clostridium saccharolyticum WM1]
 gi|302199058|gb|ADL06629.1| exodeoxyribonuclease III [Clostridium saccharolyticum WM1]
          Length = 251

 Score =  179 bits (455), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 72/263 (27%), Positives = 120/263 (45%), Gaps = 15/263 (5%)

Query: 1   MSVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           M  +   +WNVN +RA +      + KE + D+ C+QE+K ++      TL   + +   
Sbjct: 1   MKKM--ISWNVNGLRACVEKGFLDYFKEMDADVFCIQESKLQEGQIDL-TLPGYHQYWNY 57

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G A+ +K +P+ +   +  ++ D + R I A +                 +  
Sbjct: 58  AEKKGYSGTALFTKEKPLSVAYGINAEEHDREGRVIAAEYPE-----YYVVTCYTPNSQN 112

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +   +++W    L +  + LE ++P+IF GD N+  +  D  NP     +A FT E 
Sbjct: 113 ELARLPYRLTWEDAVLAYLKK-LEEKKPVIFCGDLNVAHKEIDLKNPKTNRKNAGFTDEE 171

Query: 180 RQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R+ F  L   GF D  R  +     +YS+W Y   +  KN G RID+  +S      L S
Sbjct: 172 REKFTVLLESGFIDTYRYFYPEQEGIYSWWSYRFSARKKNAGWRIDYFCVSESLKDRLAS 231

Query: 239 ARIDTKPRGWTKPSDHTPVIVSL 261
           A I T+  G    SDH PV + +
Sbjct: 232 AAIHTEVLG----SDHCPVELVI 250


>gi|82701358|ref|YP_410924.1| exodeoxyribonuclease III [Nitrosospira multiformis ATCC 25196]
 gi|82409423|gb|ABB73532.1| exodeoxyribonuclease III [Nitrosospira multiformis ATCC 25196]
          Length = 259

 Score =  179 bits (455), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 64/263 (24%), Positives = 115/263 (43%), Gaps = 13/263 (4%)

Query: 4   VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + T N+N IR A       W+   + DI+C+QE K +  +   E +    YH      
Sbjct: 1   MRIITLNLNGIRSAANKGFFRWLPLQDADIVCVQELKAQVGDITGEVVSPDGYHGYFHCA 60

Query: 62  -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            ++ Y+GV I ++ +P  +   L   ++D + R++   F      L I ++Y P G+   
Sbjct: 61  EKRGYSGVGIYTRQKPGGVTEGLGVPEIDAEGRYLRVDFG----QLSIISIYFPSGS-AG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EV 179
             +   K  ++++F     +       +I  GD+NI  +  D  N    + ++ F   E 
Sbjct: 116 EHRQAVKYFFMEQFFPMLEKLAACGSEIILCGDWNIAHKEIDLRNWRSNQKNSGFLPQER 175

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
                  Q +GF D  R  +     Y++W     +W+KN G RID+ + +P      ++ 
Sbjct: 176 AWLTDVFQELGFVDVFRRINPEPDQYTWWSNRGQAWAKNVGWRIDYQIATPGIAGKANAV 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
            I    R     SDH+P+I+  D
Sbjct: 236 SIYKTER----FSDHSPLIIDYD 254


>gi|304438523|ref|ZP_07398463.1| exodeoxyribonuclease III [Selenomonas sp. oral taxon 149 str.
           67H29BP]
 gi|304368606|gb|EFM22291.1| exodeoxyribonuclease III [Selenomonas sp. oral taxon 149 str.
           67H29BP]
          Length = 250

 Score =  179 bits (455), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 67/261 (25%), Positives = 107/261 (40%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +        KE + D  CLQETK ++     + L     +  +  +
Sbjct: 1   MRFVSWNVNGLRAALKKGFMEAFKELDADAFCLQETKMQEGQAILD-LPGYEQYFYSAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI ++ +P+ +   +   + D + R I   F                   +   
Sbjct: 60  KGYSGTAIFTRVKPLSVAYGIGIPEHDHEGRVITMEFNDVYLVTVYTPNAKRALERLDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +   R     L  ++P++  GD N+     D  NP     +A FT E R  
Sbjct: 120 M------TWEDAFRAFLLDLRAKKPVVVCGDLNVAHTEIDLKNPKSNRRNAGFTDEERGK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L N GF D  RA +      Y++W Y   +   N G RID+ ++S E    + +A I
Sbjct: 174 FTELLNAGFVDTFRALYPDLTGAYTWWSYLRHARETNAGWRIDYFLVSEELRDRIAAAEI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
                G    SDH PV ++L 
Sbjct: 234 HADVFG----SDHCPVSLTLK 250


>gi|297569473|ref|YP_003690817.1| exodeoxyribonuclease III Xth [Desulfurivibrio alkaliphilus AHT2]
 gi|296925388|gb|ADH86198.1| exodeoxyribonuclease III Xth [Desulfurivibrio alkaliphilus AHT2]
          Length = 490

 Score =  179 bits (455), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 58/261 (22%), Positives = 101/261 (38%), Gaps = 12/261 (4%)

Query: 4   VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + +A+WNVN +RA      A    E + D++ +QE K      P E      Y       
Sbjct: 238 LRLASWNVNGLRAIAKKGFAELAGELDADLLAIQEIKAHPDQLPAEARALPGYQAFWLPA 297

Query: 62  -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GVAI S+ +P++++  +  ++   Q   +      +   +              
Sbjct: 298 KRKGYSGVAIYSRLEPLKVLYGMGQEEKYEQEGRVLTMEFADFFLVNAYLPNAQPELARL 357

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             K D       R  +   + L  ++ ++  GD N+  +  D   P   +    F+   R
Sbjct: 358 PFKLDF-----CRHFQQFCENLATQKNVVVCGDLNVAHREIDLARPQENQQSPGFSPAER 412

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
                    GFTD  R  +     Y++W Y   +  +N G RID+  +       +  A 
Sbjct: 413 AWLDGFLANGFTDTFRLFNQEGGNYTWWSYRGGARQRNVGWRIDYFCIDSAGRRRVREAG 472

Query: 241 IDTKPRGWTKPSDHTPVIVSL 261
           I  +  G    SDH PV ++L
Sbjct: 473 IRPEIMG----SDHCPVTLTL 489


>gi|167736590|ref|ZP_02409364.1| exodeoxyribonuclease III [Burkholderia pseudomallei 14]
          Length = 256

 Score =  179 bits (455), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 63/264 (23%), Positives = 111/264 (42%), Gaps = 14/264 (5%)

Query: 3   VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59
           ++ V T N+N IR A       W+ E N D +C+QE K    + P E ++      H   
Sbjct: 1   MLRVITANLNGIRSAAKKGFFEWLGEQNADCVCVQEIKVSADDLPAEFVEPHGLRSHFHH 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G  + S+ +P +++      + D + R++EA F      L + ++Y+P G+  
Sbjct: 61  AQKKGYSGAGLYSRREPDDVIIGYGSSEFDAEGRYVEARFG----KLSVVSVYVPSGSSG 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +                  L+ +  +I  GD NI+ +  D  N    + ++    E 
Sbjct: 117 DERQQA--KYRFMDEFMPHLAELKAKREVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEE 174

Query: 180 RQSFQK-LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R    K   ++G+ D  R        Y++W     +++KN G RID+ + +P       +
Sbjct: 175 RAWLTKLFDDVGYVDVFRTLDPRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGVAGTAKN 234

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
             I        K SDH P+ V  D
Sbjct: 235 TSIFRDI----KFSDHAPLTVDYD 254


>gi|288817830|ref|YP_003432177.1| exodeoxyribonuclease III [Hydrogenobacter thermophilus TK-6]
 gi|288787229|dbj|BAI68976.1| exodeoxyribonuclease III [Hydrogenobacter thermophilus TK-6]
 gi|308751428|gb|ADO44911.1| exodeoxyribonuclease III Xth [Hydrogenobacter thermophilus TK-6]
          Length = 268

 Score =  179 bits (455), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 84/261 (32%), Positives = 139/261 (53%), Gaps = 6/261 (2%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64
            +A++NVNSI  R   + +W++ +  DI+CLQE KT D+NFP E    + Y   T GQK+
Sbjct: 12  KIASYNVNSINTRKELVLSWLERDPVDILCLQELKTTDENFPKEDFMKMGYECYTHGQKT 71

Query: 65  YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124
           YNGVAI S++   E+   +     D + R I   F      + I N Y PHG      K+
Sbjct: 72  YNGVAICSRFLLEEVFKGMGDATYDQEKRVIGGRFK----DVWIINAYFPHGESRGGRKF 127

Query: 125 DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ 184
             K+ + ++FLRF ++     + ++  GD N+  +  D Y+P++ ++      E R + +
Sbjct: 128 FWKLGFYEKFLRFITESFSPNDKIVLVGDMNVAMEDIDVYDPVLLKDTIGTMKEERDALK 187

Query: 185 KLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK 244
           KL + GF DA R  +     +++WDY      K++G+RID+I+++    + L    +D  
Sbjct: 188 KLISWGFVDAFRYLYPEKRQFTWWDYIGGMVWKDQGMRIDYILITKPLLAYLRDVYVDMW 247

Query: 245 PRGW--TKPSDHTPVIVSLDI 263
           PR     KPSDH P++   ++
Sbjct: 248 PRKRRNPKPSDHAPIVGVFEL 268


>gi|297200306|ref|ZP_06917703.1| exodeoxyribonuclease III [Streptomyces sviceus ATCC 29083]
 gi|197709420|gb|EDY53454.1| exodeoxyribonuclease III [Streptomyces sviceus ATCC 29083]
          Length = 274

 Score =  179 bits (455), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 57/268 (21%), Positives = 100/268 (37%), Gaps = 8/268 (2%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           V+TV + NVN +RA        W+ E + D++CLQE + E +  P        +H+    
Sbjct: 8   VLTVTSANVNGLRAAAKKGFVEWLAETSADVLCLQEVRAEPQQLPESVRAPEGWHVVHAP 67

Query: 62  Q--KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
              K   GV++ ++ +P  +       + D   R++EA     T    +       G   
Sbjct: 68  AAAKGRAGVSLYTRREPDRVRIGFGSAEFDTSGRYVEADLPGVTVA-SLYLPSGEVGTER 126

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K      ++       ++       ++  GD+NI  Q  D  N    +  + F  E 
Sbjct: 127 QDEKVRFMDEFLVHLKDLRTRAAADGREVVVCGDWNIAHQQADLKNWRANQKSSGFLPEE 186

Query: 180 RQSFQKLQN----MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
           R    ++                 D    YS+W Y   ++  + G RID+ + +P   S 
Sbjct: 187 RAWLSRVLEPTDGGYVDVVRSLHPDVEGPYSWWSYRGRAFDNDSGWRIDYHVSTPGLASK 246

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                ++       + SDH PV V  D+
Sbjct: 247 AVKGFVERAATHAERWSDHAPVTVVYDL 274


>gi|317178229|dbj|BAJ56018.1| exodeoxyribonuclease [Helicobacter pylori F16]
          Length = 250

 Score =  179 bits (455), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 67/260 (25%), Positives = 116/260 (44%), Gaps = 13/260 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      +    + D+ C+QE+K + +   FE  +          +
Sbjct: 1   MKLISWNVNGLRACMTKGFMDFFNSVDADVFCIQESKMQQEQNTFE-FKGYFDFWNCAIK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+GV   +K +P+ +   +  ++ + + R +   F     +  + N+Y P+     S 
Sbjct: 60  KGYSGVVTFTKKEPLSVSYGINMEEHNKEGRVVTCEFE----SFYLVNVYTPNSQQALSR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                   ++   +   + LEL++P+I  GD N+     D  NP     +A F+ E R+ 
Sbjct: 116 LSYRMSWEVE--FKKFLKALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L N GF D  R  +      Y++W Y   +  KN G RID+ + S    + L  A I
Sbjct: 174 FNELLNAGFIDTFRYFYPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALI 233

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
                G    SDH PV + L
Sbjct: 234 YKDILG----SDHCPVGLEL 249


>gi|317013296|gb|ADU83904.1| exodeoxyribonuclease III [Helicobacter pylori Lithuania75]
          Length = 250

 Score =  179 bits (455), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 68/260 (26%), Positives = 116/260 (44%), Gaps = 13/260 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      +    + D+ C+QE+K + +   FE  +          +
Sbjct: 1   MKLISWNVNGLRACMTKGFMDFFNSVDADVFCIQESKMQQEQNTFE-FKGYFDFWNCAIK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+GV   +K +P+ +   +  ++ D + R +   F     +  + N+Y P+     S 
Sbjct: 60  KGYSGVVTFTKKEPLSVSYGINIEEHDKEGRVVTCEFE----SFYLVNVYTPNSQQALSR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                   ++   +   + LEL++P+I  GD N+     D  NP     +A F+ E R+ 
Sbjct: 116 LSYRISWEVE--FKKFLKALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L N GF D  R  +      Y++W Y   +  KN G RID+ + S    + L  A I
Sbjct: 174 FSELLNAGFIDTFRYFYPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALI 233

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
                G    SDH PV + L
Sbjct: 234 YKDILG----SDHCPVGLEL 249


>gi|319780773|ref|YP_004140249.1| exodeoxyribonuclease III Xth [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317166661|gb|ADV10199.1| exodeoxyribonuclease III Xth [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 268

 Score =  179 bits (455), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 76/266 (28%), Positives = 121/266 (45%), Gaps = 9/266 (3%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64
           +ATWN+NS+R R+  +   + E+ PD++CLQETK  D+ FP +  + L Y HI   GQK 
Sbjct: 5   IATWNINSVRLRMPIVERLLVEHAPDVLCLQETKVPDELFPEKAFRKLGYEHIAFHGQKG 64

Query: 65  YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124
           Y+GVA +++     +      +     +R +  T     + + + N Y+P G        
Sbjct: 65  YHGVATVARRPIELVEKRRFCE--IEDSRHLSVTVRAGGKAILLHNFYVPAGGDEPDPVI 122

Query: 125 DDKISWIKRFLRFASQRLELEEPLI---FAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
           + K      F+   +      + +      GD NI P  HD ++     N    T    +
Sbjct: 123 NRKFKHKLDFVAEMNAIRAEHDEVSGSVLVGDLNIAPLEHDVWSHKQLLNVVSHTPVETE 182

Query: 182 SFQKLQNMGFTDAIRATH--DTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHS 238
           +F+ ++  G    +   +  D   LY++W Y A  W   N+G R+DH+  SP        
Sbjct: 183 NFEAMRRAGNWVDLMRLNVPDEQKLYTWWSYRAQDWELSNRGRRLDHVWSSPNLVPSFSG 242

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIP 264
             I    RGW +PSDH PVI   D+ 
Sbjct: 243 YEILRLARGWERPSDHVPVIARFDLD 268


>gi|257455364|ref|ZP_05620599.1| exodeoxyribonuclease III [Enhydrobacter aerosaccus SK60]
 gi|257447326|gb|EEV22334.1| exodeoxyribonuclease III [Enhydrobacter aerosaccus SK60]
          Length = 270

 Score =  179 bits (455), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 86/266 (32%), Positives = 125/266 (46%), Gaps = 9/266 (3%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64
              ++N+N +RAR H L A      PD+I LQETK  D  FP +++Q L YH+E  GQKS
Sbjct: 3   RFVSFNINGLRARPHQLEAIRDIIAPDVIGLQETKVHDDAFPLQSVQQLGYHVEFFGQKS 62

Query: 65  YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-TK 123
           + GVA+LS+ +PI +    P D  D Q RFI A +  N + + + N Y P G      TK
Sbjct: 63  HYGVALLSRQKPIFVQKGFPTDSDDAQRRFIHARYDFNGKYIDVLNGYFPQGENRKHETK 122

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY------NPIIWENDACFTL 177
           +  K  +      +  Q       +I  GD NI P   D           +      F  
Sbjct: 123 FPMKRKFYADLTDYILQLKAENRSMILMGDMNIAPLDFDIGISEDSVKRWLKNGTCSFLP 182

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK--NKGIRIDHIMLSPEATSL 235
           E R+ +Q L      D  RA +      S++DY +  +     +G+RIDHI+++P+    
Sbjct: 183 EEREWYQALLATDLHDTYRALYADGQALSWFDYRSKGFDDEPKRGLRIDHILMTPDLADK 242

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
           L+ A +    R   KPSDH P+    
Sbjct: 243 LNGAGVSYDLRAMEKPSDHAPIWADF 268


>gi|255536052|ref|YP_003096423.1| Exodeoxyribonuclease III [Flavobacteriaceae bacterium 3519-10]
 gi|255342248|gb|ACU08361.1| Exodeoxyribonuclease III [Flavobacteriaceae bacterium 3519-10]
          Length = 254

 Score =  179 bits (455), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 73/263 (27%), Positives = 122/263 (46%), Gaps = 14/263 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC-- 60
           + + ++NVN IRA    N   W++  +PDIIC+QE+K  +     E+ + + YH      
Sbjct: 1   MKIISYNVNGIRAAFTKNFVGWLEVADPDIICIQESKAGNDQIDIESFEKIGYHSYWHSA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GV I SK +P  +      +  D + R I A F        + ++Y+P  + I 
Sbjct: 61  QKKGYSGVGIASKIKPNYVEYGCGIEHYDSEGRIIRADFD----DFSVISVYVPSASNIE 116

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EV 179
                 K+ +   FL++     +    LI +GD+NI  +P D +NP   +N + F   E 
Sbjct: 117 R--LGYKMEFCYDFLQYIKNLKKTIPNLIISGDFNICHKPIDIHNPEGLKNASGFLPIER 174

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
               + +      D+ R  +D    Y++W Y  +S  +NKG R+D+  +S      L  A
Sbjct: 175 EWLSKFIDECELIDSFRYFNDQPDYYTWWSYRQNSRERNKGWRLDYNFVSNSLKEKLSRA 234

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
            I  +       SDH PV+V + 
Sbjct: 235 VILKEV----FHSDHCPVLVEIK 253


>gi|160945969|ref|ZP_02093195.1| hypothetical protein FAEPRAM212_03502 [Faecalibacterium prausnitzii
           M21/2]
 gi|158443700|gb|EDP20705.1| hypothetical protein FAEPRAM212_03502 [Faecalibacterium prausnitzii
           M21/2]
 gi|295103228|emb|CBL00772.1| exodeoxyribonuclease III [Faecalibacterium prausnitzii SL3/3]
          Length = 250

 Score =  179 bits (455), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 65/263 (24%), Positives = 108/263 (41%), Gaps = 16/263 (6%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60
           + + +WNVN +RA + H  A      + DI  +QETK +             Y  +  + 
Sbjct: 1   MKLISWNVNGLRACLTHGFAESFAALDADIFSVQETKMQPGQ---ADFAPEGYTEYTYSA 57

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+G A   K  P+ + T +  +  D + R +   +                 +   
Sbjct: 58  EKKGYSGTACWCKTAPLAVTTGIGLEQHDHEGRVLTLEYPGFYL-----VNCYTPNSQDG 112

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             + D ++ W   F  +    L+ ++P+I  GD N+     D  N       A FT + R
Sbjct: 113 LKRLDYRMEWEDAFRAYLLA-LDAKKPVILCGDLNVAHTEMDIKNAKTNRMSAGFTDQER 171

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
               +L   GF D+ R  H     YS+W Y   +  KN G RID+ ++S      + +A 
Sbjct: 172 AKMTELLAAGFADSFRVVHPDEVKYSWWSYRFHAREKNAGWRIDYFIVSRRIADRIRAAE 231

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263
           I  +  G    SDH PV + +D+
Sbjct: 232 IHNEIFG----SDHCPVELQIDL 250


>gi|302524148|ref|ZP_07276490.1| exodeoxyribonuclease III [Streptomyces sp. AA4]
 gi|302433043|gb|EFL04859.1| exodeoxyribonuclease III [Streptomyces sp. AA4]
          Length = 282

 Score =  179 bits (455), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 58/272 (21%), Positives = 110/272 (40%), Gaps = 13/272 (4%)

Query: 3   VVTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           V+ V+T NVN +RA +      W+     D++  QE + E    P   +    +      
Sbjct: 15  VLIVSTVNVNGLRAAVKKGFVEWLAATEADVVACQEVRAEAAQLPASVVAPEGWFAAHAP 74

Query: 62  --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
              K  NGV++ S+ +P E+ T     + +   R++E           +          +
Sbjct: 75  SVVKGRNGVSLYSRVEPDEVRTGFGEPEFEDSGRYLEMHLPG-----VVVASLYLPSGDV 129

Query: 120 TSTKYDDKISWIKRFLRF----ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
            + + D+K  ++  FL +     ++       ++  GD+NI     D  N    + ++ F
Sbjct: 130 GTERQDEKERFMDAFLPYLVELRAKSAAEGREVVVVGDWNIAYDTVDLKNWRGNQKNSGF 189

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E R+   ++   G+TD  R         Y++W Y   ++  + G RID  + +P    
Sbjct: 190 LPEEREWMGRVYEAGYTDVQRRLDPEGPGPYTWWSYRGKAFDNDSGWRIDCQLATPGLAE 249

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDIPEP 266
            + S  ++       + SDH PV  + D+P P
Sbjct: 250 KVKSVVVERAESYDQRWSDHAPVTATYDVPFP 281


>gi|258515007|ref|YP_003191229.1| exodeoxyribonuclease III [Desulfotomaculum acetoxidans DSM 771]
 gi|257778712|gb|ACV62606.1| exodeoxyribonuclease III [Desulfotomaculum acetoxidans DSM 771]
          Length = 259

 Score =  179 bits (455), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 84/262 (32%), Positives = 134/262 (51%), Gaps = 5/262 (1%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
               A++N+NSIRAR   L  W+ ++ PD++CLQETK  DK+FP +  + + Y+    GQ
Sbjct: 2   TFKAASFNINSIRARKELLINWLLQSKPDLLCLQETKVMDKDFPVQDFRDIGYNTLFKGQ 61

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           KSYNGVAILS +    + + L       +AR + A        + + N Y+P G    S 
Sbjct: 62  KSYNGVAILSPHDLTRVDSDLGEAAEPGEARLLAAQVKG----IYVVNTYIPQGQDPKSP 117

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           K+  K++WI+    + ++    E+P+++ GD+N+ P+P D ++P        F  E  + 
Sbjct: 118 KFIHKLNWIRAMRDYFTRNFTPEQPVLWLGDFNVAPEPIDIHDPKRLLGHVGFHPEEHKV 177

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYY-ADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
              ++  GF D  R        Y+FWDY       +N G R+DHI  +         + +
Sbjct: 178 LAHVKEWGFQDIFRKHKPEGGHYTFWDYRVPRGVERNLGWRVDHIWGTRAIADRSMDSWV 237

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
           D +PR   KPSDHT ++   +I
Sbjct: 238 DIEPRKLEKPSDHTFIMAEFNI 259


>gi|239833024|ref|ZP_04681353.1| exodeoxyribonuclease III (xth) [Ochrobactrum intermedium LMG 3301]
 gi|239825291|gb|EEQ96859.1| exodeoxyribonuclease III (xth) [Ochrobactrum intermedium LMG 3301]
          Length = 268

 Score =  179 bits (455), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 77/266 (28%), Positives = 123/266 (46%), Gaps = 9/266 (3%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64
           VATWN+NS+R R+  +  ++++  PD++CLQETK  D  FP +  ++L Y HI   GQK 
Sbjct: 5   VATWNINSVRLRMPLVEQFLRDYQPDVLCLQETKCPDNLFPSKGFRALGYEHIAISGQKG 64

Query: 65  YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124
           Y+GVA +SK     +     G       R + A      + LRI N Y+P G      + 
Sbjct: 65  YHGVATVSKRPLTGVEK--IGFCDMGDCRHLSAVVEAGGKKLRIHNFYVPAGGDEPDPQI 122

Query: 125 DDKISWIKRF---LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180
           + K +    F   +R      +     +  GD NI P  +D ++          T  E  
Sbjct: 123 NPKFAHKLAFLEEMRAIVADRQDGHSSVLVGDLNIAPLENDVWSHKQLLKIVSHTPIETE 182

Query: 181 QSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLLHS 238
                    G++D +R        ++++W Y A  W   ++G R+DH+  S +    +  
Sbjct: 183 TLEDLRVKGGWSDLMRQLIPADQKIFTWWSYRAKDWAESDRGRRLDHVWGSGDLEQHIQG 242

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIP 264
            +I    RGW +PSDH PVI + ++ 
Sbjct: 243 LQILRDARGWDRPSDHVPVIATFNLD 268


>gi|183221215|ref|YP_001839211.1| exodeoxyribonuclease [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189911306|ref|YP_001962861.1| exodeoxyribonuclease III [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167775982|gb|ABZ94283.1| Exodeoxyribonuclease III [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167779637|gb|ABZ97935.1| Exodeoxyribonuclease [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
          Length = 256

 Score =  179 bits (455), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 74/262 (28%), Positives = 118/262 (45%), Gaps = 13/262 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC-- 60
           + + T N N IR+ +   L  +I+  NPDI+C QETK   K    E  + L Y +     
Sbjct: 1   MKIITLNCNGIRSSLSKGLLDFIRHENPDILCFQETKAPGKEIDREEFRHLGYEVYFSLA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +  Y+G A+L+K +P ++           + R +   F    Q   + NLY P G    
Sbjct: 61  EKPGYSGTAVLTKQKPKQVTIGFGDGIFRSEGRSVFLEF----QDFYLWNLYFPSG-TSG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   K  ++  F       L+ ++PL+  GD NI     D +NP   +N++ F    R
Sbjct: 116 EERQKVKYQFLDEFTELTKPFLKKKKPLLICGDVNIAHTEMDIHNPKGNQNNSGFLPAER 175

Query: 181 QSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           + F     +GF D  R  H      YS+W Y   +   NKG RID+  ++   +  L +A
Sbjct: 176 KWFTDFLELGFFDCFRTIHPDVLDEYSWWTYRFQARKNNKGWRIDYFFVTKSKSVRLQTA 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261
           +I  +P      SDH PV++ +
Sbjct: 236 KIAKEP----VMSDHAPVVLEI 253


>gi|306843439|ref|ZP_07476040.1| exodeoxyribonuclease III [Brucella sp. BO1]
 gi|306276130|gb|EFM57830.1| exodeoxyribonuclease III [Brucella sp. BO1]
          Length = 268

 Score =  179 bits (455), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 75/266 (28%), Positives = 122/266 (45%), Gaps = 9/266 (3%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64
           +ATWN+NS+R R+  +  ++++  PD++CLQETK  D  FP +  ++L Y HI   GQK 
Sbjct: 5   IATWNINSVRLRMPLVEQFLRDYQPDVLCLQETKCPDDQFPAKGFRALGYEHIAISGQKG 64

Query: 65  YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124
           Y+GVA +S+     +             R + A      + LRI N Y+P G        
Sbjct: 65  YHGVATVSRRPLDGVEK--VDFCNMGDCRHLSAVVEAGDRKLRIHNFYVPAGGDEPDPAI 122

Query: 125 DDKISWIKRF---LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180
           + K +    F   +R      +     +  GD NI P  +D ++          T  E  
Sbjct: 123 NPKFAHKLAFLEEMRAIIADRKDGCSSLLVGDLNIAPLENDVWSHKQLLKIVSHTPIETE 182

Query: 181 QSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHS 238
                    G++D +R        ++++W Y A  W   ++G R+DH+  S +  S +  
Sbjct: 183 TLEDLRIKGGWSDLMRHLIAADQKIFTWWSYRAKDWDAADRGRRLDHVWGSADLESHIKG 242

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIP 264
            ++    RGW +PSDH PVI + D+ 
Sbjct: 243 LQVLRDARGWDRPSDHVPVIATFDLD 268


>gi|256787199|ref|ZP_05525630.1| exodeoxyribonuclease (secreted protein) [Streptomyces lividans
           TK24]
          Length = 267

 Score =  179 bits (455), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 53/267 (19%), Positives = 100/267 (37%), Gaps = 8/267 (2%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++TV + NVN +RA        W+   + D++CLQE + E    P        +H+    
Sbjct: 1   MLTVTSVNVNGLRAAAKKGFVEWLAGTSADVLCLQEVRAEPHQLPDHAGAPEGWHVTHAP 60

Query: 62  Q--KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
              K   GV++ ++ +P  +       + D   R++EA     T    +       G   
Sbjct: 61  AAAKGRAGVSLYTRREPDAVRVGFGSTEFDTSGRYVEADLPGVTVA-SLYLPSGEVGTER 119

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K      ++        +       ++  GD+NI  +  D  N    + ++ F  E 
Sbjct: 120 QDEKVRFMGEFLAYLKELRERAAAEGREVVVCGDWNIAHREADLKNWRANKKNSGFLPEE 179

Query: 180 RQSFQKLQNMGFTDAIRA----THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
           R+   ++ +      +        D    YS+W Y   ++  + G RID+ + +P   + 
Sbjct: 180 REWLGRVLDPAEGGYVDVVRALHPDVEGPYSWWSYRGRAFDNDAGWRIDYHVSTPGLAAK 239

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262
                ++       + SDH PV V  D
Sbjct: 240 AVKGYVERAATHAERWSDHAPVTVVYD 266


>gi|171321052|ref|ZP_02910036.1| exodeoxyribonuclease III Xth [Burkholderia ambifaria MEX-5]
 gi|171093687|gb|EDT38835.1| exodeoxyribonuclease III Xth [Burkholderia ambifaria MEX-5]
          Length = 257

 Score =  179 bits (455), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 60/264 (22%), Positives = 110/264 (41%), Gaps = 14/264 (5%)

Query: 3   VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59
           ++ V T N+N IR A       W+ E N D +C+QE K    + P E ++      +   
Sbjct: 1   MMRVITANLNGIRSAAKKGFFEWLGEQNADCVCVQEIKVSADDLPAEFVEPHGLRSYFHH 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G  + S+ +P +++      + D + R++EA +      L + ++Y+P G+  
Sbjct: 61  AEKKGYSGAGMYSRREPDDVIIGFGSSEFDAEGRYVEARYG----KLSVVSVYVPSGSSG 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +                  L+ +  +I  GD NI+ +  D  N    + ++    E 
Sbjct: 117 EERQQA--KYRFMDEFMPHLAELKSKREVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEE 174

Query: 180 RQSFQK-LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R    +   ++G+ D  R        Y++W     +++KN G RID+ + +P        
Sbjct: 175 RAWLTQLFDDVGYVDVFRTLDPRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGVAGTAKR 234

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
             I        K SDH P+ V  D
Sbjct: 235 TSIFKDI----KFSDHAPLTVDYD 254


>gi|58580132|ref|YP_199148.1| exodeoxyribonuclease III [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|58424726|gb|AAW73763.1| exodeoxyribonuclease III [Xanthomonas oryzae pv. oryzae KACC10331]
          Length = 285

 Score =  179 bits (455), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 63/275 (22%), Positives = 106/275 (38%), Gaps = 24/275 (8%)

Query: 2   SVVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           S + + ++N N +R A      AW    + D++C+QETK ++            Y     
Sbjct: 18  SSMRIISFNANGLRSAASKGFFAWFAAQDADVLCVQETKAQEHQLAGPDFLPTGYKAWFR 77

Query: 61  G---QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
               +K Y+GVAI S+++P E+ T L   + D + R+IEA F       R    +     
Sbjct: 78  DASTKKGYSGVAIYSRHEPDEVRTALGWPEFDEEGRYIEARFGN-----RSVVSFYIPSG 132

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
                +   K   ++       + L      +  GD+NI+    D  N    + ++    
Sbjct: 133 SSGELRQGYKFQVMQWLRPILDEWLASGRQYVLCGDWNIVRTALDIKNWKSNQKNSGCLP 192

Query: 178 EVRQSFQKLQN-----------MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226
             R     L              G+ D+ R  H     Y++W     + + N G RID+ 
Sbjct: 193 PERDWLNGLCADVPDDANAAEGRGWVDSYRVLHPQGQDYTWWSNRGAARTNNVGWRIDYQ 252

Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           +++P     L +  I  + R     SDH P IV  
Sbjct: 253 LVTPGLRDTLRACSIYREER----FSDHAPYIVDY 283


>gi|317179707|dbj|BAJ57495.1| exodeoxyribonuclease [Helicobacter pylori F30]
          Length = 250

 Score =  179 bits (455), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 69/260 (26%), Positives = 115/260 (44%), Gaps = 13/260 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      +    + D+ C+QE+K + +   FE  +          +
Sbjct: 1   MKLISWNVNGLRACMTKGFMDFFNSVDADVFCIQESKMQQEQNTFE-FKGYFDFWNCAIK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+GV   +K +P+ +   +  ++ D + R +   F     +  + N+Y P+     S 
Sbjct: 60  KGYSGVVTFTKKEPLSVSYGINMEEHDKEGRVVTCEFE----SFYLVNVYTPNSQQALSR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                   ++   R   + LEL++P+I  GD N+     D  NP     +A F+ E R  
Sbjct: 116 LSYRMSWEVE--FRKFLKVLELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L N GF D  R  +      Y++W Y   +  KN G RID+ + S    + L  A I
Sbjct: 174 FNELLNAGFIDTFRYFYPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALI 233

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
                G    SDH PV + L
Sbjct: 234 YKDILG----SDHCPVGLEL 249


>gi|224534803|ref|ZP_03675375.1| exodeoxyribonuclease III [Borrelia spielmanii A14S]
 gi|224514051|gb|EEF84373.1| exodeoxyribonuclease III [Borrelia spielmanii A14S]
          Length = 255

 Score =  179 bits (455), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 60/260 (23%), Positives = 106/260 (40%), Gaps = 12/260 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCG 61
           + + +WNVN IRA +      +++E  PDI+C+QETK   +  P + +    Y +     
Sbjct: 1   MKLISWNVNGIRAVLKKGFLEFVREYTPDILCVQETKALREQLPSDLILENYYSYFSKSK 60

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
            K Y+GV I SK +PI +        L  +    E    I   +  +        +    
Sbjct: 61  IKGYSGVCIYSKVKPIAVN------LLGKEIFDNEGRGLIAYYSDFVLINGYFPNSQALR 114

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            +   K+ ++          +   + ++  GD+NI     D  +P    +   + +E   
Sbjct: 115 RRLVYKLDFLSYVENLVDSFVNGGKNVVICGDFNIAHTKIDLISPDSNRDSPGYYIEETT 174

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
              +  N G+ D  R  +     Y++W Y   +  KN G RID+ +++      +  + I
Sbjct: 175 WLDRFLNKGYVDTFRIFNKEPGYYTWWSYRTRAREKNMGWRIDYFIVNEFFKRNVKKSLI 234

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
             K  G    SDH PV + L
Sbjct: 235 LDKVMG----SDHCPVCLEL 250


>gi|308175792|ref|YP_003922497.1| apurinic/apyrimidinic endonuclease [Bacillus amyloliquefaciens DSM
           7]
 gi|307608656|emb|CBI45027.1| apurinic/apyrimidinic endonuclease [Bacillus amyloliquefaciens DSM
           7]
 gi|328555768|gb|AEB26260.1| apurinic/apyrimidinic endonuclease [Bacillus amyloliquefaciens
           TA208]
 gi|328914157|gb|AEB65753.1| apurinic/apyrimidinic endonuclease [Bacillus amyloliquefaciens LL3]
          Length = 252

 Score =  179 bits (454), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 73/263 (27%), Positives = 125/263 (47%), Gaps = 14/263 (5%)

Query: 4   VTVATWNVNSIRARIHNLA--AWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + +WNVN +RA +  +     ++E   DI+CLQETK +D     +  +  + +     
Sbjct: 1   MKLISWNVNGLRAVMKKIDINTCLQETKADILCLQETKVQDGQVSLQP-EGYHDYWNYAV 59

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G A+ SK +P+++   L  DD D + R I   F                      
Sbjct: 60  KKGYSGTAVFSKVKPLQVSYGLGIDDHDQEGRVITLEFEN-----VFVVNCYTPNAKRGL 114

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            + D ++ W     +   Q+L+ ++P+I  GD N+  +  D  NP     +A F+ + R+
Sbjct: 115 ERIDYRLQWE-ADFKDYLQKLDQKKPVILCGDLNVAHREIDLKNPKANRKNAGFSDQERE 173

Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           +F  L N GFTD+ R  +      YS+W Y  ++  KN G R+D++++S      +  A 
Sbjct: 174 AFSVLLNAGFTDSFRYLYPDQEGAYSWWSYRTNAREKNIGWRLDYVIVSDRLKQRITQAA 233

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263
           I     G    SDH PV ++LD+
Sbjct: 234 ICADIMG----SDHCPVEMTLDL 252


>gi|328883057|emb|CCA56296.1| Exodeoxyribonuclease III [Streptomyces venezuelae ATCC 10712]
          Length = 276

 Score =  179 bits (454), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 53/266 (19%), Positives = 99/266 (37%), Gaps = 8/266 (3%)

Query: 5   TVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ- 62
           TV + NVN +RA        W+   + D +CLQE + E+   P E      +        
Sbjct: 12  TVTSVNVNGLRAAAKKGFVEWLAGTSADAVCLQEVRAEEAQLPAEVRAPEGWFTVHAPAA 71

Query: 63  -KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
            K   GV++ ++ +P  +       + D   R++EA     T    +       G     
Sbjct: 72  AKGRAGVSLYTRREPDRVRVGFGSSEFDGSGRYVEADLPGVTVA-SLYLPSGEAGTERQD 130

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            KY     ++       ++       ++  GD+NI  +  D  N    + +A F  E R+
Sbjct: 131 EKYRFMGEFLPYLKELRTRAAADGREVVVCGDWNIAHREADLKNWRANKKNAGFLPEERE 190

Query: 182 SFQKLQNM----GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
              ++ +               +    YS+W Y   ++  + G RID+ + +P   +   
Sbjct: 191 WLGRVLDEADGAYVDVVRALHPEQEGPYSWWSYRGRAFDNDTGWRIDYQIATPGLAAKAV 250

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263
              ++       + SDH PV V  ++
Sbjct: 251 KGYVERAATHAERWSDHAPVTVVYEL 276


>gi|182677440|ref|YP_001831586.1| exodeoxyribonuclease III Xth [Beijerinckia indica subsp. indica
           ATCC 9039]
 gi|182633323|gb|ACB94097.1| exodeoxyribonuclease III Xth [Beijerinckia indica subsp. indica
           ATCC 9039]
          Length = 272

 Score =  179 bits (454), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 82/272 (30%), Positives = 118/272 (43%), Gaps = 11/272 (4%)

Query: 4   VTV--ATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETC 60
           + +  ATWN+NS+R RI  +  ++ E  PD++CLQETK  D  FP      L Y HI   
Sbjct: 1   MRLSLATWNINSVRLRIDLVTRFLTEQAPDVLCLQETKCRDSEFPLAAFHKLGYSHIAIN 60

Query: 61  GQKSYNGVAILSKYQPIEI-VTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
           GQK Y+GVAI+SK    E                      T   + + + N Y+P G   
Sbjct: 61  GQKGYHGVAIVSKIPFAESGKRDFCAKGDARHITVTLLPETTPARPINLHNFYVPAGGDE 120

Query: 120 T----STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
                + K+  K++++     +    L      I  GD NI P   D ++          
Sbjct: 121 PDPEINPKFAHKLAFLDEMAEWMRTDLIAHRDAIIVGDLNIAPLETDVWSHKALLKVVSH 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATH--DTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEA 232
           T    +   ++ N G        H      LY++W Y +  WSK +KG R+DHI +S   
Sbjct: 181 TPIEVEKLGRVINAGPWIDALRHHVPPEEKLYTWWSYRSPDWSKADKGRRLDHIWVSASL 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
              L    I    RGW +PSDH PV V L++ 
Sbjct: 241 KQHLDGLTILRDSRGWDRPSDHVPVTVQLNLD 272


>gi|208435390|ref|YP_002267056.1| exodeoxyribonuclease [Helicobacter pylori G27]
 gi|208433319|gb|ACI28190.1| exodeoxyribonuclease [Helicobacter pylori G27]
          Length = 250

 Score =  179 bits (454), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 69/260 (26%), Positives = 115/260 (44%), Gaps = 13/260 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      +    + D+ C+QE+K + +   FE  +          +
Sbjct: 1   MKLISWNVNGLRACMTKGFMDFFNSVDADVFCIQESKMQQEQNTFE-FKGYFDFWNCAIK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+GV   +K +P+ +   +  ++ D + R +   F     +  + N+Y P+     S 
Sbjct: 60  KGYSGVVTFTKKEPLSVSYGINMEEHDKEGRVVTCEFE----SFYLVNVYTPNSQQALSR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                   ++   R   + LEL++P+I  GD N+     D  NP     +A F+ E R  
Sbjct: 116 LSYRMSWEVE--FRKFLKALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L N GF D  R  +      Y++W Y   +  KN G RID+ + S    + L  A I
Sbjct: 174 FSELLNAGFIDTFRYFYPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALI 233

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
                G    SDH PV + L
Sbjct: 234 YKDILG----SDHCPVGLEL 249


>gi|218781643|ref|YP_002432961.1| exodeoxyribonuclease III Xth [Desulfatibacillum alkenivorans AK-01]
 gi|218763027|gb|ACL05493.1| exodeoxyribonuclease III Xth [Desulfatibacillum alkenivorans AK-01]
          Length = 253

 Score =  179 bits (454), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 63/263 (23%), Positives = 121/263 (46%), Gaps = 13/263 (4%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59
           ++   +WNVN IRA         +K+ N DI+ +QET+   +    + +   +Y  +  +
Sbjct: 1   MLKFVSWNVNGIRAVEKKGFTDMVKDFNADILAIQETRALKEQLSEDLINIADYTSYWFS 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GV++ +K  P++++  +   + D + R I   +        + N+Y P+  P 
Sbjct: 61  AEKKGYSGVSVYTKQTPLDVMYGMDSPEHDAEGRVITLEYD----DFYLMNVYFPNAQPK 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                 D      + L   +  L  ++ ++  GDYN+  +P D  NP   E +  ++ E 
Sbjct: 117 LVRL--DWKLGFNQTLHKFANALGEKKSVVLCGDYNVAHKPIDLANPKQNEQNPGYSPEE 174

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R    +    G+ DA R  +     Y++W Y  ++ +KN G RID+  +  ++   + +A
Sbjct: 175 RAWMDEFIGSGYVDAFRMFNQEPDNYTWWSYRFNARAKNIGWRIDYFCVDEKSKGRVKNA 234

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
            I  +  G    SDH PV +  +
Sbjct: 235 EILNEVMG----SDHCPVSLDFE 253


>gi|108563814|ref|YP_628130.1| exodeoxyribonuclease III [Helicobacter pylori HPAG1]
 gi|107837587|gb|ABF85456.1| exodeoxyribonuclease [Helicobacter pylori HPAG1]
          Length = 250

 Score =  179 bits (454), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 68/260 (26%), Positives = 115/260 (44%), Gaps = 13/260 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      +    + D+ C+QE+K + +   FE  +          +
Sbjct: 1   MKLISWNVNGLRACMTKGFMDFFNSVDADVFCIQESKMQQEQNTFE-FRGYFDFWNCAIK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+GV   +K +P+ +   +  ++ D + R +   F     +  + N+Y P+     S 
Sbjct: 60  KGYSGVVTFTKKEPLSVSYGINIEEHDKEGRVVTCEFE----SFYLVNVYTPNSQQALSR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                   ++   +   + LEL++P+I  GD N+     D  NP     +A F+ E R  
Sbjct: 116 LSYRMSWEVE--FKKFLKALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L N GF D  R  +      Y++W Y   +  KN G RID+ + S    + L  A I
Sbjct: 174 FSELLNAGFIDTFRYFYPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALI 233

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
                G    SDH PV + L
Sbjct: 234 YKDILG----SDHCPVGLEL 249


>gi|257881925|ref|ZP_05661578.1| AP endonuclease [Enterococcus faecium 1,231,502]
 gi|257890085|ref|ZP_05669738.1| AP endonuclease [Enterococcus faecium 1,231,410]
 gi|258615657|ref|ZP_05713427.1| exodeoxyribonuclease [Enterococcus faecium DO]
 gi|260558703|ref|ZP_05830892.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth
           [Enterococcus faecium C68]
 gi|293563951|ref|ZP_06678361.1| exodeoxyribonuclease III [Enterococcus faecium E1162]
 gi|294617705|ref|ZP_06697329.1| exodeoxyribonuclease III [Enterococcus faecium E1679]
 gi|294623736|ref|ZP_06702567.1| exodeoxyribonuclease III [Enterococcus faecium U0317]
 gi|257817583|gb|EEV44911.1| AP endonuclease [Enterococcus faecium 1,231,502]
 gi|257826445|gb|EEV53071.1| AP endonuclease [Enterococcus faecium 1,231,410]
 gi|260075162|gb|EEW63475.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth
           [Enterococcus faecium C68]
 gi|291596042|gb|EFF27311.1| exodeoxyribonuclease III [Enterococcus faecium E1679]
 gi|291596861|gb|EFF28081.1| exodeoxyribonuclease III [Enterococcus faecium U0317]
 gi|291604080|gb|EFF33604.1| exodeoxyribonuclease III [Enterococcus faecium E1162]
          Length = 250

 Score =  179 bits (454), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 70/261 (26%), Positives = 112/261 (42%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +  N      E + D  CLQETK +      + L     +     +
Sbjct: 1   MKFISWNVNGLRAIVNKNFLEVFHELDADFFCLQETKLQAGQIDLD-LPGYYQYWNYAER 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K   +     +  D  D + R I   ++                +     
Sbjct: 60  KGYSGTAIFAKKPALNATYGMGIDIHDTEGRLITLEYSDF-----FLVTCYTPNSQSELK 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           + D ++ W + F  +    L+ ++P+I  GD N+  Q  D  N    + +A FT E R +
Sbjct: 115 RLDYRLEWEEAFYNYLEN-LKKQKPVIVCGDLNVAHQKIDLKNWKTNQKNAGFTPEERAA 173

Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             +L + GF D  R  +     +YS+W+Y  +S   N G RID+ + S +    L  A+I
Sbjct: 174 LSRLLDNGFIDTFRYFYPTQEGVYSWWNYRFNSRKNNAGWRIDYFLTSKDLEPGLADAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            T   G    SDH PV + L 
Sbjct: 234 HTDIMG----SDHCPVELDLK 250


>gi|304394302|ref|ZP_07376225.1| exodeoxyribonuclease III protein [Ahrensia sp. R2A130]
 gi|303293742|gb|EFL88119.1| exodeoxyribonuclease III protein [Ahrensia sp. R2A130]
          Length = 269

 Score =  179 bits (454), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 80/263 (30%), Positives = 122/263 (46%), Gaps = 8/263 (3%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64
           +ATWN+NS+R RI  +  ++ E+ PD++CLQE K  ++ FP +   +  Y H    GQK 
Sbjct: 7   IATWNINSVRLRIGLVEKFLAEHQPDVLCLQEIKCVNELFPADAFTAAGYPHHAVHGQKG 66

Query: 65  YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124
           Y+GVA +SK+   E  +           R +E         +R+ N Y+P G  +     
Sbjct: 67  YHGVATVSKHPLTETAS--ADYVAMGDTRHVECIVQSPGGPVRMHNFYVPAGGDVADPAV 124

Query: 125 DDKISWIKRFLRFAS--QRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVRQ 181
           + K     +F+         + + P I  GD NI P   D ++          T  E   
Sbjct: 125 NPKFDHKMKFIEEMKALGCDDGDVPAILVGDLNIAPLETDVWSHKQLLKVVSHTPVETDG 184

Query: 182 SFQKLQNMGFTDAIRATHDTHHL-YSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHSA 239
             + +   G+TD IR       + +++W Y +  W   +KG R+DHI  SP+  S L   
Sbjct: 185 LNEVMAKGGWTDLIRQHIPAEDILFTWWSYRSKDWDAADKGRRLDHIWSSPKLASSLSKI 244

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
            +  + RGW KPSDH PVI   D
Sbjct: 245 EVLREARGWEKPSDHVPVIARFD 267


>gi|217034282|ref|ZP_03439699.1| hypothetical protein HP9810_885g13 [Helicobacter pylori 98-10]
 gi|216943254|gb|EEC22719.1| hypothetical protein HP9810_885g13 [Helicobacter pylori 98-10]
          Length = 250

 Score =  179 bits (454), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 69/260 (26%), Positives = 116/260 (44%), Gaps = 13/260 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      +    + D+ C+QE+K + +   FE  +          +
Sbjct: 1   MKLISWNVNGLRACMTKGFMDFFNSVDADVFCIQESKMQQEQNTFE-FKGYFDFWNCAIK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+GV   +K +P+ +   +  ++ D + R +   F     +  + N+Y P+     S 
Sbjct: 60  KGYSGVVTFTKKEPLSVSYGINMEEHDKEGRVVTCEFE----SFYLVNVYTPNSQQALSR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                   ++   R   + LEL++P+I  GD N+     D  NP     +A F+ E R+ 
Sbjct: 116 LSYRMSWEVE--FRKFLKALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L N GF D  R  +      Y++W Y   +  KN G RID+ + S    + L  A I
Sbjct: 174 FNELLNAGFIDTFRYFYPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALI 233

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
                G    SDH PV + L
Sbjct: 234 YKDILG----SDHCPVGLEL 249


>gi|109946643|ref|YP_663871.1| exodeoxyribonuclease III [Helicobacter acinonychis str. Sheeba]
 gi|109713864|emb|CAJ98872.1| exodeoxyribonuclease [Helicobacter acinonychis str. Sheeba]
          Length = 250

 Score =  179 bits (454), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 75/260 (28%), Positives = 119/260 (45%), Gaps = 13/260 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      +    + DI C+QE+K + +   FE  +          +
Sbjct: 1   MKLISWNVNGLRACMTKGFMDFFNSVDADIFCIQESKMQQEQNTFE-FKGYFDFWNCAIK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+GV   +K +P+ +   +  ++ D + R I   F     +  + N+Y P+     S 
Sbjct: 60  KGYSGVVTFTKKEPLSVSYGINIEEHDKEGRIITCEFE----SFYLVNIYTPNSQQALSR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
             + ++SW   F RF    LEL++P+I  GD N+     D  NP     +A F+ E R  
Sbjct: 116 -LNYRMSWEVEFRRFLKA-LELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L N GF D  R  +      Y++W Y   +  KN G RID+ + S    + L  A I
Sbjct: 174 FNELLNTGFIDTFRYFYPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNSLKTRLKDALI 233

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
                G    SDH PV + L
Sbjct: 234 YKDILG----SDHCPVGLEL 249


>gi|325924898|ref|ZP_08186330.1| exodeoxyribonuclease III [Xanthomonas perforans 91-118]
 gi|325544685|gb|EGD16036.1| exodeoxyribonuclease III [Xanthomonas perforans 91-118]
          Length = 266

 Score =  179 bits (454), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 67/273 (24%), Positives = 112/273 (41%), Gaps = 24/273 (8%)

Query: 4   VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + ++N N +R A      AW    + D++C+QETK ++            Y       
Sbjct: 1   MRIISFNANGLRSAASKGFFAWFAAQDADVLCVQETKAQEHQLAGPDFLPTGYKAWFRDA 60

Query: 62  --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GVAI S+++P E+ T L   + D + R+IEA F      L + + Y+P G+  
Sbjct: 61  STKKGYSGVAIYSRHEPDEVRTALGWPEFDEEGRYIEARFG----NLSVVSFYIPSGS-S 115

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              + D K   ++       Q L      +  GD+NI+    D  N    + ++      
Sbjct: 116 GELRQDYKFQVMQWLRPILEQWLASGRQYVLCGDWNIVRTALDIKNWKSNQKNSGCLPPE 175

Query: 180 RQSFQKLQN-----------MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
           R     L              G+ D+ R  H     Y++W     + + N G RID+ ++
Sbjct: 176 RDWLNGLCADAPEDTNPAEGRGWVDSYRVLHPQGQDYTWWSNRGAARANNVGWRIDYQLV 235

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           +P     L +  I  + R     SDH P IV  
Sbjct: 236 TPGLRDTLKACSIYREER----FSDHAPYIVDY 264


>gi|69245045|ref|ZP_00603203.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth
           [Enterococcus faecium DO]
 gi|314939354|ref|ZP_07846596.1| exodeoxyribonuclease III [Enterococcus faecium TX0133a04]
 gi|314944126|ref|ZP_07850782.1| exodeoxyribonuclease III [Enterococcus faecium TX0133C]
 gi|314949042|ref|ZP_07852404.1| exodeoxyribonuclease III [Enterococcus faecium TX0082]
 gi|314953542|ref|ZP_07856453.1| exodeoxyribonuclease III [Enterococcus faecium TX0133A]
 gi|314994499|ref|ZP_07859775.1| exodeoxyribonuclease III [Enterococcus faecium TX0133B]
 gi|314998115|ref|ZP_07863002.1| exodeoxyribonuclease III [Enterococcus faecium TX0133a01]
 gi|68196046|gb|EAN10478.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth
           [Enterococcus faecium DO]
 gi|313587883|gb|EFR66728.1| exodeoxyribonuclease III [Enterococcus faecium TX0133a01]
 gi|313591110|gb|EFR69955.1| exodeoxyribonuclease III [Enterococcus faecium TX0133B]
 gi|313594421|gb|EFR73266.1| exodeoxyribonuclease III [Enterococcus faecium TX0133A]
 gi|313597294|gb|EFR76139.1| exodeoxyribonuclease III [Enterococcus faecium TX0133C]
 gi|313641358|gb|EFS05938.1| exodeoxyribonuclease III [Enterococcus faecium TX0133a04]
 gi|313644519|gb|EFS09099.1| exodeoxyribonuclease III [Enterococcus faecium TX0082]
          Length = 269

 Score =  179 bits (454), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 70/262 (26%), Positives = 113/262 (43%), Gaps = 13/262 (4%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++   +WNVN +RA +  N      E + D  CLQETK +      + L     +     
Sbjct: 19  LLKFISWNVNGLRAIVNKNFLEVFHELDADFFCLQETKLQAGQIDLD-LPGYYQYWNYAE 77

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G AI +K   +     +  D  D + R I   ++                +    
Sbjct: 78  RKGYSGTAIFAKKPALNATYGMGIDIHDTEGRLITLEYSDF-----FLVTCYTPNSQSEL 132

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            + D ++ W + F  +    L+ ++P+I  GD N+  Q  D  N    + +A FT E R 
Sbjct: 133 KRLDYRLEWEEAFYNYLEN-LKKQKPVIVCGDLNVAHQKIDLKNWKTNQKNAGFTPEERA 191

Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           +  +L + GF D  R  +     +YS+W+Y  +S   N G RID+ + S +    L  A+
Sbjct: 192 ALSRLLDNGFIDTFRYFYPTQEGVYSWWNYRFNSRKNNAGWRIDYFLTSKDLEPGLADAK 251

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I T   G    SDH PV + L 
Sbjct: 252 IHTDIMG----SDHCPVELDLK 269


>gi|317181208|dbj|BAJ58994.1| exodeoxyribonuclease [Helicobacter pylori F32]
          Length = 250

 Score =  179 bits (454), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 69/260 (26%), Positives = 116/260 (44%), Gaps = 13/260 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      +    + D+ C+QE+K + +   FE  +          +
Sbjct: 1   MKLISWNVNGLRACMTKGFMDFFNSVDADVFCIQESKMQQEQNTFE-FKGYFDFWNCAIK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+GV   +K +P+ +   +  ++ D + R +   F     +  + N+Y P+     S 
Sbjct: 60  KGYSGVVTFTKKEPLSVSYGINMEEHDKEGRVVTCEFE----SFYLVNVYTPNSQQALSR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                   ++   R   + LEL++P+I  GD N+     D  NP     +A F+ E R+ 
Sbjct: 116 LSYRMSWEVE--FRKFLKALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L N GF D  R  +      Y++W Y   +  KN G RID+ + S    + L  A I
Sbjct: 174 FSELLNAGFIDTFRYFYPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALI 233

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
                G    SDH PV + L
Sbjct: 234 YKDILG----SDHCPVGLEL 249


>gi|218231608|ref|YP_002368543.1| exodeoxyribonuclease III [Bacillus cereus B4264]
 gi|218159565|gb|ACK59557.1| exodeoxyribonuclease III [Bacillus cereus B4264]
          Length = 252

 Score =  179 bits (454), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 68/262 (25%), Positives = 121/262 (46%), Gaps = 14/262 (5%)

Query: 4   VTVATWNVNSIRARI-HN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + +WNVN +RA I       +++E++ DI CLQE K ++       L+    +     
Sbjct: 1   MKLISWNVNGLRAVIAKGEFLEYLEESSADIFCLQEIKLQEGQIDLN-LEGYYTYWNYAV 59

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G AI SK +P+ +   L  ++ D + R I   F                 +    
Sbjct: 60  KKGYSGTAIFSKKEPLSVTYGLDIEEHDQEGRLITLEFEDFYMI-----TLYTPNSKRGL 114

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            + D ++ W   F  +  + L+ ++P+IF GD N+  +  D  NP     +  F+ E R+
Sbjct: 115 ERLDYRMKWEDDFRSYIKR-LDEKKPVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEERE 173

Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            F  +   GF D  R  +      YS+W Y   + +KN G R+D+ ++S      +  A+
Sbjct: 174 KFSSILEEGFIDTYRYLYPDQEGAYSWWSYRMGARAKNIGWRLDYFVVSERMKDQITEAK 233

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I+++  G    SDH PV + ++
Sbjct: 234 INSEVMG----SDHCPVELHIN 251


>gi|49474726|ref|YP_032768.1| exodeoxyribonuclease III [Bartonella quintana str. Toulouse]
 gi|49240230|emb|CAF26700.1| Exodeoxyribonuclease III [Bartonella quintana str. Toulouse]
          Length = 269

 Score =  179 bits (454), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 78/265 (29%), Positives = 113/265 (42%), Gaps = 9/265 (3%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQK 63
            +ATWNVNSIR R+  +  ++     D++CLQETK  D  FP E  ++  Y HI   GQK
Sbjct: 4   RIATWNVNSIRLRLAQVFQYLDLFAADVLCLQETKCPDALFPREAFEAAGYKHIILSGQK 63

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           SYNGVAI+S+     +             R+I        + +RI N Y+P G  +    
Sbjct: 64  SYNGVAIVSRLPFKNVEKRFFCQ--KQDCRYISVIVEAYGRNIRIHNFYVPAGGDVPDAD 121

Query: 124 YDDKISWIKRF---LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
            ++K      F   +       E +   +  GD NI P   D ++          T    
Sbjct: 122 VNEKFRHKLDFLEEMASIRANQEDDLASLLVGDLNIAPLEDDVWSHQQLLKVVSHTPIET 181

Query: 181 QSFQ--KLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLH 237
           +  Q    Q                +Y++W Y A  W+  ++G R+DHI  SP     + 
Sbjct: 182 ERLQALCCQGGWVDLMRLHFPPPTKIYTWWSYRARDWALADRGRRLDHIWSSPNLAPFVA 241

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLD 262
           +  I    RGW +PSDH PV    D
Sbjct: 242 NLSIFRDARGWNQPSDHVPVQTVFD 266


>gi|89070627|ref|ZP_01157907.1| exodeoxyribonuclease III, putative [Oceanicola granulosus HTCC2516]
 gi|89043774|gb|EAR49976.1| exodeoxyribonuclease III, putative [Oceanicola granulosus HTCC2516]
          Length = 262

 Score =  179 bits (454), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 75/262 (28%), Positives = 111/262 (42%), Gaps = 6/262 (2%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQK 63
           T+ATWN+NS+R R   +   ++E  PD++CLQE K+  +  P E   +L Y H+   GQ+
Sbjct: 4   TLATWNINSVRLRAPLVLRLLEEEAPDVLCLQECKSPVEKMPLEGFAALGYRHVVARGQR 63

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            YNGVAILSK    E+  H        +         +      +          +    
Sbjct: 64  GYNGVAILSKTPIEEVAAHDYASLGHARHIAGRLENGVVVHNFYVPAGGDKPDREVNEK- 122

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVRQS 182
                          +   E  E  I  GD N+ P+  D ++          T  EV   
Sbjct: 123 --FGQKLDYLAAMRDAFHAERPERSILVGDLNVAPREDDVWSHKQLLRVVSHTPVEVNHF 180

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHSARI 241
               +  G+ D  R    +  LYS+W Y +  W   +KG R+DH+  S +  S  H +R+
Sbjct: 181 TDAQEAGGWVDVTRQDIPSGRLYSWWSYRSPDWQAADKGRRLDHVWASADIASAAHGSRV 240

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
               RGW +PSDH PV  S D+
Sbjct: 241 LRDVRGWEQPSDHVPVFASFDL 262


>gi|188590962|ref|YP_001795562.1| exodeoxyribonuclease iii/endonuclease/phosphatase [Cupriavidus
           taiwanensis LMG 19424]
 gi|170937856|emb|CAP62840.1| putative EXODEOXYRIBONUCLEASE III/endonuclease/phosphatase
           [Cupriavidus taiwanensis LMG 19424]
          Length = 258

 Score =  179 bits (454), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 59/266 (22%), Positives = 116/266 (43%), Gaps = 13/266 (4%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IET 59
           ++ + + N+N IR+        W+ + + D++C+QE K +  +     L    YH     
Sbjct: 1   MLRIISANLNGIRSASKKGFFDWMGKQDADMVCVQELKAQAADMTEAFLAPHGYHGFFHY 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GV + ++++P  ++T     + D + R++E    +    L + ++Y+P G+  
Sbjct: 61  AEKKGYSGVGLYTRHKPERVITGFGNAEFDNEGRYVE----VQYPHLAVISVYVPSGSSG 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +   K  +++ FL    Q       ++  GD NI  +  D  N      ++ F  E 
Sbjct: 117 EERQLA-KFRFLEAFLPHLLQLKASGREIVLCGDVNIAHKEIDIKNWKGNLKNSGFLPEE 175

Query: 180 RQSFQKLQN-MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R    +L +  G+ D  R        Y++W     +++KN G RID+ + +P+       
Sbjct: 176 RAWIGELFDVHGYVDVFRKLDPRPDQYTWWSNRGQAYAKNVGWRIDYHLATPKIADTAQL 235

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIP 264
             I        K SDH P+ +  + P
Sbjct: 236 CSIYKD----EKFSDHAPLSIDYNFP 257


>gi|15646134|ref|NP_208316.1| exodeoxyribonuclease III [Helicobacter pylori 26695]
 gi|2314703|gb|AAD08563.1| exodeoxyribonuclease (lexA) [Helicobacter pylori 26695]
          Length = 250

 Score =  179 bits (454), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 69/260 (26%), Positives = 116/260 (44%), Gaps = 13/260 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      +    + D+ C+QE+K + +   FE  +          +
Sbjct: 1   MKLISWNVNGLRACMTKGFMDFFNSVDADVFCIQESKMQQEQNTFE-FKGYFDFWNCAIK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+GV   +K +P+ +   +  ++ D + R I   F     +  + N+Y P+     S 
Sbjct: 60  KGYSGVVTFTKKEPLSVSYGINMEEHDKEGRVITCEFE----SFYLVNVYTPNSQQALSR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                   ++   +   + LEL++P+I  GD N+     D  NP     +A F+ E R+ 
Sbjct: 116 LSYRMSWEVE--FKKFLKALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L N GF D  R  +      Y++W Y   +  KN G RID+ + S    + L  A I
Sbjct: 174 FSELLNAGFIDTFRYFYPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALI 233

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
                G    SDH PV + L
Sbjct: 234 YKDILG----SDHCPVGLEL 249


>gi|329910713|ref|ZP_08275356.1| Exodeoxyribonuclease III [Oxalobacteraceae bacterium IMCC9480]
 gi|327546113|gb|EGF31174.1| Exodeoxyribonuclease III [Oxalobacteraceae bacterium IMCC9480]
          Length = 256

 Score =  179 bits (454), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 60/264 (22%), Positives = 108/264 (40%), Gaps = 13/264 (4%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IET 59
           ++ +   N+N IR+        W+ + + D IC+QE K +  +   E L    YH     
Sbjct: 1   MLKIIAANLNGIRSASKKGFFEWMAKQDADFICVQELKAQAADMSPEMLAPEGYHGYFHY 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G  + SK  P +++T     + D + R+++  +      L I ++Y P G+  
Sbjct: 61  AEKKGYSGTGVYSKRVPDQVITGFGTPEFDAEGRYVQCDYG----NLSIVSVYCPSGSSG 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +          FL   +        ++  GD+NI  Q  D  N    + ++ F  E 
Sbjct: 117 EERQLAKFRFMDV-FLPHLAALKASGREVVICGDWNIAHQEIDLKNWKGNKKNSGFLPEE 175

Query: 180 RQSFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R    +L +     D  R   +    Y++W     +W+ N G RID+ + +P   +   +
Sbjct: 176 RAWLSRLFDEVALVDVFRRVDERAEQYTWWSNRGQAWANNVGWRIDYQIATPGIAATAKA 235

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
             I    R     SDH P+ +  D
Sbjct: 236 VAIYKDER----FSDHAPLTIEYD 255


>gi|325917542|ref|ZP_08179745.1| exodeoxyribonuclease III [Xanthomonas vesicatoria ATCC 35937]
 gi|325536258|gb|EGD08051.1| exodeoxyribonuclease III [Xanthomonas vesicatoria ATCC 35937]
          Length = 266

 Score =  179 bits (454), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 64/273 (23%), Positives = 108/273 (39%), Gaps = 24/273 (8%)

Query: 4   VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + ++N N +R A       W    + D++C+QETK ++            Y       
Sbjct: 1   MRIISFNANGLRSAASKGFFDWFATQDADVLCIQETKAQEHQLAGPEFLPAGYKAWFRDA 60

Query: 62  --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GVAI +K  P E+ T L   + D + R+IEA F      L + + Y+P G+  
Sbjct: 61  STKKGYSGVAIYAKQAPDEVRTALGWPEFDEEGRYIEARFG----NLSVVSFYIPSGS-S 115

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              + D K   ++       + L      +  GD+NI+    D  N    + ++      
Sbjct: 116 GELRQDYKFQVMEWLRPILDEWLASGRQYVLCGDWNIVRTALDIKNWKSNQKNSGCLPPE 175

Query: 180 RQSFQKLQNMG-----------FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
           R     L               + D+ R  H     Y++W     + + N G RID+ ++
Sbjct: 176 RDWLNGLCADTASDASPADGRGWVDSYRVLHPQGEDYTWWSNRGAARANNVGWRIDYQLV 235

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           +P     L +  I  + R     SDH P IV  
Sbjct: 236 TPGLRDALQACTIYREQR----FSDHAPYIVDY 264


>gi|261854669|ref|YP_003261952.1| exodeoxyribonuclease III Xth [Halothiobacillus neapolitanus c2]
 gi|261835138|gb|ACX94905.1| exodeoxyribonuclease III Xth [Halothiobacillus neapolitanus c2]
          Length = 256

 Score =  179 bits (454), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 69/262 (26%), Positives = 114/262 (43%), Gaps = 12/262 (4%)

Query: 4   VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60
           + V ++N N IR A       W+ E N D +C+QETK +             Y     + 
Sbjct: 1   MRVISFNANGIRSAARKGFFDWLSEQNADFVCIQETKAQADQLTDPEFCPAGYTCQYVSA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GVAI ++  P  I+T L   + D + R+    +      L + +LYLP G+   
Sbjct: 61  EKKGYSGVAIYARRSPDAIITQLGLPEFDAEGRYCAFEYP----DLMVASLYLPSGSAGD 116

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +               S   +  +PLI  GD+NI  +  D  N    + ++ F    R
Sbjct: 117 HRQESKDRFLAAYLPILESYLQKQHKPLILCGDWNIAHKEIDLKNWKSNQKNSGFLPHER 176

Query: 181 QSFQKLQN-MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
               +L + +GF DA R       +Y++W   A++W  N G RID+ +++P+    +  A
Sbjct: 177 AWLDELFDRLGFVDAHRLVAPGEAVYTWWSNRANAWENNVGWRIDYQIITPDLADRVERA 236

Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261
            +        K SDH P+I+  
Sbjct: 237 TVYRDM----KFSDHAPLIIDY 254


>gi|291457988|ref|ZP_06597378.1| exodeoxyribonuclease III [Oribacterium sp. oral taxon 078 str.
           F0262]
 gi|291419320|gb|EFE93039.1| exodeoxyribonuclease III [Oribacterium sp. oral taxon 078 str.
           F0262]
          Length = 272

 Score =  179 bits (454), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 69/269 (25%), Positives = 117/269 (43%), Gaps = 14/269 (5%)

Query: 5   TVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
            + +WNVN +RA +     +     + D+ CLQETK ++       L   + +     +K
Sbjct: 4   KLISWNVNGLRAVLGKTFLSDFHALDADVFCLQETKLQEGQAELS-LPDYHQYWNYAEKK 62

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            Y+G A+ SK +P+ +   +   + D + R I A F                   ++   
Sbjct: 63  GYSGTALFSKEEPLSVSYGIGIPEHDREGRVISAEFPDCYILTVYVPNSQNELQRLSYRM 122

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
                   +   R     LE ++P+I+ GD N+  Q  D  NP    ++A FT + R  F
Sbjct: 123 ------EWEDAFREYILSLEEKKPVIYCGDLNVAHQEIDLKNPASNHHNAGFTDDERAKF 176

Query: 184 QKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
            +L + G+ D+ R  H      YS+W Y   +  +N G RID+ ++S +    +  A I 
Sbjct: 177 SRLLDCGYLDSFRFLHPEERDAYSWWSYRTKARERNVGWRIDYFVVSEKLRERIRGASIH 236

Query: 243 TKPRGWTKPSDHTPVIVSLDI-PEPRKKQ 270
            +  G    SDH PV + L + PE  ++ 
Sbjct: 237 PEIMG----SDHCPVELDLAVCPEGAERA 261


>gi|53717833|ref|YP_106819.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei K96243]
 gi|53724973|ref|YP_102006.1| exodeoxyribonuclease III [Burkholderia mallei ATCC 23344]
 gi|67642475|ref|ZP_00441231.1| exodeoxyribonuclease III [Burkholderia mallei GB8 horse 4]
 gi|76809547|ref|YP_331785.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1710b]
 gi|121600000|ref|YP_994076.1| exodeoxyribonuclease III [Burkholderia mallei SAVP1]
 gi|124386596|ref|YP_001028261.1| exodeoxyribonuclease III [Burkholderia mallei NCTC 10229]
 gi|126438610|ref|YP_001057228.1| exodeoxyribonuclease III [Burkholderia pseudomallei 668]
 gi|126449280|ref|YP_001081905.1| exodeoxyribonuclease III [Burkholderia mallei NCTC 10247]
 gi|126452249|ref|YP_001064469.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1106a]
 gi|134284078|ref|ZP_01770772.1| exodeoxyribonuclease III [Burkholderia pseudomallei 305]
 gi|167001940|ref|ZP_02267730.1| exodeoxyribonuclease III [Burkholderia mallei PRL-20]
 gi|167717548|ref|ZP_02400784.1| exodeoxyribonuclease III [Burkholderia pseudomallei DM98]
 gi|167813690|ref|ZP_02445370.1| exodeoxyribonuclease III [Burkholderia pseudomallei 91]
 gi|167822205|ref|ZP_02453676.1| exodeoxyribonuclease III [Burkholderia pseudomallei 9]
 gi|167843799|ref|ZP_02469307.1| exodeoxyribonuclease III [Burkholderia pseudomallei B7210]
 gi|167892298|ref|ZP_02479700.1| exodeoxyribonuclease III [Burkholderia pseudomallei 7894]
 gi|167900793|ref|ZP_02487998.1| exodeoxyribonuclease III [Burkholderia pseudomallei NCTC 13177]
 gi|167909017|ref|ZP_02496108.1| exodeoxyribonuclease III [Burkholderia pseudomallei 112]
 gi|167917055|ref|ZP_02504146.1| exodeoxyribonuclease III [Burkholderia pseudomallei BCC215]
 gi|217424907|ref|ZP_03456403.1| exodeoxyribonuclease III [Burkholderia pseudomallei 576]
 gi|226194644|ref|ZP_03790239.1| exodeoxyribonuclease III [Burkholderia pseudomallei Pakistan 9]
 gi|237810366|ref|YP_002894817.1| exodeoxyribonuclease III [Burkholderia pseudomallei MSHR346]
 gi|242317805|ref|ZP_04816821.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1106b]
 gi|254177087|ref|ZP_04883744.1| exodeoxyribonuclease III [Burkholderia mallei ATCC 10399]
 gi|254182229|ref|ZP_04888826.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1655]
 gi|254188156|ref|ZP_04894668.1| exodeoxyribonuclease III [Burkholderia pseudomallei Pasteur 52237]
 gi|254196563|ref|ZP_04902987.1| exodeoxyribonuclease III [Burkholderia pseudomallei S13]
 gi|254203686|ref|ZP_04910046.1| exodeoxyribonuclease III [Burkholderia mallei FMH]
 gi|254208662|ref|ZP_04915010.1| exodeoxyribonuclease III [Burkholderia mallei JHU]
 gi|254260883|ref|ZP_04951937.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1710a]
 gi|254295731|ref|ZP_04963188.1| exodeoxyribonuclease III [Burkholderia pseudomallei 406e]
 gi|254360283|ref|ZP_04976553.1| exodeoxyribonuclease III [Burkholderia mallei 2002721280]
 gi|52208247|emb|CAH34178.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei K96243]
 gi|52428396|gb|AAU48989.1| exodeoxyribonuclease III [Burkholderia mallei ATCC 23344]
 gi|76579000|gb|ABA48475.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1710b]
 gi|121228810|gb|ABM51328.1| exodeoxyribonuclease III [Burkholderia mallei SAVP1]
 gi|124294616|gb|ABN03885.1| exodeoxyribonuclease III [Burkholderia mallei NCTC 10229]
 gi|126218103|gb|ABN81609.1| exodeoxyribonuclease III [Burkholderia pseudomallei 668]
 gi|126225891|gb|ABN89431.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1106a]
 gi|126242150|gb|ABO05243.1| exodeoxyribonuclease III [Burkholderia mallei NCTC 10247]
 gi|134244530|gb|EBA44634.1| exodeoxyribonuclease III [Burkholderia pseudomallei 305]
 gi|147745198|gb|EDK52278.1| exodeoxyribonuclease III [Burkholderia mallei FMH]
 gi|147750538|gb|EDK57607.1| exodeoxyribonuclease III [Burkholderia mallei JHU]
 gi|148029523|gb|EDK87428.1| exodeoxyribonuclease III [Burkholderia mallei 2002721280]
 gi|157806098|gb|EDO83268.1| exodeoxyribonuclease III [Burkholderia pseudomallei 406e]
 gi|157935836|gb|EDO91506.1| exodeoxyribonuclease III [Burkholderia pseudomallei Pasteur 52237]
 gi|160698128|gb|EDP88098.1| exodeoxyribonuclease III [Burkholderia mallei ATCC 10399]
 gi|169653306|gb|EDS85999.1| exodeoxyribonuclease III [Burkholderia pseudomallei S13]
 gi|184212767|gb|EDU09810.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1655]
 gi|217391927|gb|EEC31953.1| exodeoxyribonuclease III [Burkholderia pseudomallei 576]
 gi|225933345|gb|EEH29337.1| exodeoxyribonuclease III [Burkholderia pseudomallei Pakistan 9]
 gi|237506823|gb|ACQ99141.1| exodeoxyribonuclease III [Burkholderia pseudomallei MSHR346]
 gi|238523636|gb|EEP87073.1| exodeoxyribonuclease III [Burkholderia mallei GB8 horse 4]
 gi|242141044|gb|EES27446.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1106b]
 gi|243062348|gb|EES44534.1| exodeoxyribonuclease III [Burkholderia mallei PRL-20]
 gi|254219572|gb|EET08956.1| exodeoxyribonuclease III [Burkholderia pseudomallei 1710a]
          Length = 256

 Score =  179 bits (454), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 62/264 (23%), Positives = 111/264 (42%), Gaps = 14/264 (5%)

Query: 3   VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59
           ++ V T N+N IR A       W+ E N D +C+QE K    + P E ++      +   
Sbjct: 1   MLRVITANLNGIRSAAKKGFFEWLGEQNADCVCVQEIKVSADDLPAEFVEPHGLRSYFHH 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G  + S+ +P +++      + D + R++EA F      L + ++Y+P G+  
Sbjct: 61  AQKKGYSGAGLYSRREPDDVIIGYGSSEFDAEGRYVEARFG----KLSVVSVYVPSGSSG 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +                  L+ +  +I  GD NI+ +  D  N    + ++    E 
Sbjct: 117 DERQQA--KYRFMDEFMPHLAELKAKREVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEE 174

Query: 180 RQSFQK-LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R    K   ++G+ D  R        Y++W     +++KN G RID+ + +P       +
Sbjct: 175 RAWLTKLFDDVGYVDVFRTLDPRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGVAGTAKN 234

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
             I        K SDH P+ V  D
Sbjct: 235 TSIFRDI----KFSDHAPLTVDYD 254


>gi|257463916|ref|ZP_05628302.1| exodeoxyribonuclease III [Fusobacterium sp. D12]
 gi|317061443|ref|ZP_07925928.1| exodeoxyribonuclease III [Fusobacterium sp. D12]
 gi|313687119|gb|EFS23954.1| exodeoxyribonuclease III [Fusobacterium sp. D12]
          Length = 250

 Score =  179 bits (454), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 70/261 (26%), Positives = 113/261 (43%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN IRA +      + +  + DI CLQETK        + L+  + +     +
Sbjct: 1   MKLISWNVNGIRACLKKGFMEYFQAQDADIFCLQETKCSAGQVELD-LKGYHQYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +P+ +   L  ++ D + R I   F                   +   
Sbjct: 60  KGYSGTAIFTKKEPLSVSYGLGIEEHDQEGRVICLEFEDFYMVTVYTPNSKNELERLDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +   R    +L  ++P++  GD N+  +  D  NP     +A FT E R  
Sbjct: 120 M------IWEDEFRNYLSKLNEKKPVVVCGDMNVAHEEIDLKNPKTNRRNAGFTDEERNK 173

Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L   GFTD+ R  +    H YS+W Y A++   N G RID+ ++S +    +  A I
Sbjct: 174 FTELLQAGFTDSFRYLYPDTLHAYSWWSYRANARKNNTGWRIDYFVVSNDWKEQIQEAEI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
             +  G    SDH PV + L 
Sbjct: 234 HAEQEG----SDHCPVALYLK 250


>gi|229018928|ref|ZP_04175771.1| Exodeoxyribonuclease [Bacillus cereus AH1273]
 gi|229025172|ref|ZP_04181596.1| Exodeoxyribonuclease [Bacillus cereus AH1272]
 gi|228736105|gb|EEL86676.1| Exodeoxyribonuclease [Bacillus cereus AH1272]
 gi|228742371|gb|EEL92528.1| Exodeoxyribonuclease [Bacillus cereus AH1273]
          Length = 252

 Score =  179 bits (454), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 69/262 (26%), Positives = 118/262 (45%), Gaps = 14/262 (5%)

Query: 4   VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + +WNVN +RA         +++E+N DI CLQE K +         +    +     
Sbjct: 1   MKLISWNVNGLRAVIAKGGFLEYLEESNADIFCLQEIKLQSGQIDLNP-EGYYTYWNYAV 59

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G AI +K +P+ +   L  D+ D + R I   F                 +    
Sbjct: 60  KKGYSGTAIFTKKEPLSVTYGLGIDEHDQEGRVITLEFEDFHMI-----TLYTPNSKRGL 114

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            + D ++ W   F  +  + L+ ++P+IF GD N+  +  D  NP     +  F+ E R+
Sbjct: 115 ERLDYRMKWEDDFRAYIKR-LDKKKPVIFCGDLNVSHKEIDLKNPKSNRKNPGFSDEERE 173

Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            F K+   GF D  R  +      YS+W Y   + +KN G R+D+ + S      +  A+
Sbjct: 174 KFTKILEEGFVDTYRFLYPEQEGAYSWWSYRMGARAKNIGWRLDYFVTSERLKHKITDAK 233

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I+++  G    SDH PV + +D
Sbjct: 234 INSEIMG----SDHCPVELHMD 251


>gi|308183626|ref|YP_003927753.1| exodeoxyribonuclease III [Helicobacter pylori PeCan4]
 gi|308062786|gb|ADO04674.1| exodeoxyribonuclease III [Helicobacter pylori Cuz20]
 gi|308065811|gb|ADO07703.1| exodeoxyribonuclease III [Helicobacter pylori PeCan4]
          Length = 250

 Score =  179 bits (453), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 70/260 (26%), Positives = 115/260 (44%), Gaps = 13/260 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      +    + DI C+QE+K +     FE  +          +
Sbjct: 1   MKLISWNVNGLRACMTKGFMDFFNSVDADIFCIQESKMQQDQNTFE-FKGYFDFWNCAIK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+GV   +K +P+ +   +  ++ D + R +   F     +  + N+Y+P+     S 
Sbjct: 60  KGYSGVVTFTKKEPLSVSYGINIEEHDKEGRVVTCEFE----SFYLVNVYVPNSQQALSR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                   ++   R   + LEL++P+I  GD N+     D  NP     +A F+ E R  
Sbjct: 116 LSYRMSWEVE--FRKFLKALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L N GF D  R  +      Y++W Y   +  KN G RID+ + S    + L  A I
Sbjct: 174 FNELLNAGFIDTFRYFYPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALI 233

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
                G    SDH PV + L
Sbjct: 234 YKDILG----SDHCPVGLEL 249


>gi|207091978|ref|ZP_03239765.1| exodeoxyribonuclease [Helicobacter pylori HPKX_438_AG0C1]
          Length = 250

 Score =  179 bits (453), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 68/260 (26%), Positives = 115/260 (44%), Gaps = 13/260 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      +    + D+ C+QE+K + +   FE  +          +
Sbjct: 1   MKLISWNVNGLRACMTKGFMDFFNSVDADVFCIQESKMQQEQNTFE-FKGYFDFWNCAIK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+GV   +K +P+ +   +  ++ D + R +   F     +  + N+Y P+     S 
Sbjct: 60  KGYSGVVTFTKKEPLSVSYGINMEEHDKEGRVVTCEFE----SFYLVNVYTPNSQQALSR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                   ++   +   + LEL++P+I  GD N+     D  NP     +A F+ E R  
Sbjct: 116 ISYRMSWEVE--FKKFLKALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L N GF D  R  +      Y++W Y   +  KN G RID+ + S    + L  A I
Sbjct: 174 FSELLNAGFIDTFRYFYPNKERAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALI 233

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
                G    SDH PV + L
Sbjct: 234 YKDILG----SDHCPVGLEL 249


>gi|291545257|emb|CBL18366.1| exodeoxyribonuclease III [Ruminococcus sp. 18P13]
          Length = 256

 Score =  179 bits (453), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 68/258 (26%), Positives = 111/258 (43%), Gaps = 13/258 (5%)

Query: 4   VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA R     A+  + + D  C+QETK +      E L   N +     +
Sbjct: 1   MKLISWNVNGLRACREKGFEAFFAQEDADFFCIQETKLQAGQIQLE-LPGYNQYWHYADK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G A+ +K+ P+ +         + + R +   +        + N Y+P+       
Sbjct: 60  KGYSGTAVFTKHIPLSVQRDFGLPAHNGEGRVLTLEYP----DFYLVNAYVPNSKRELLR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
              D     +  LR     L+  +P+I+ GD N+  +  D  NP     +A FT E R  
Sbjct: 116 L--DYRMEWEDALRQYLLGLDARKPVIYCGDLNVAHREIDLKNPKSNRRNAGFTDEERGR 173

Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
              L + GFTD  R  +      Y++W Y   +  KN G RID+ ++S     L+  + I
Sbjct: 174 LSTLLDSGFTDTFRLLYPDTAGAYTWWSYMFHAREKNAGWRIDYFIVSNRIAPLVQDSLI 233

Query: 242 DTKPRGWTKPSDHTPVIV 259
                G    SDH PV +
Sbjct: 234 YKDVLG----SDHCPVGL 247


>gi|259417747|ref|ZP_05741666.1| exodeoxyribonuclease III [Silicibacter sp. TrichCH4B]
 gi|259346653|gb|EEW58467.1| exodeoxyribonuclease III [Silicibacter sp. TrichCH4B]
          Length = 262

 Score =  179 bits (453), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 87/268 (32%), Positives = 124/268 (46%), Gaps = 11/268 (4%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIET 59
           MS  T+ATWN+NS+R R   +   ++E  PD++CLQE K+  +  P E  + L Y H+  
Sbjct: 1   MS-FTLATWNINSVRLREPIVIKLLQEEGPDVLCLQECKSPVEKIPMEAFRELGYQHMIA 59

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            GQK YNGVAILS+    ++     GD                   + I N Y+P G   
Sbjct: 60  RGQKGYNGVAILSRLPIEDV-----GDKDFASLGHARHVAGRLENGVTIHNFYVPAGGDE 114

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL 177
              + + K      +L         + P      GD NI P+  D ++          T 
Sbjct: 115 PDREKNVKFGQKLDYLTEMRDWFHADRPEKSVLVGDLNIAPREDDVWDHKKLLKVVSHTP 174

Query: 178 -EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSL 235
            EV    Q ++  G+ D  R       LYS+W Y A  W   +KG R+DH+  +P+ T+ 
Sbjct: 175 IEVEHLAQVMEAGGWADVTRKDIPEGQLYSWWSYRAKDWDAADKGRRLDHVWTTPDITNA 234

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            HS+RI    RGW KPSDH PV  + D+
Sbjct: 235 AHSSRILRGARGWEKPSDHAPVFATFDL 262


>gi|307566413|ref|ZP_07628850.1| exodeoxyribonuclease III [Prevotella amnii CRIS 21A-A]
 gi|307344885|gb|EFN90285.1| exodeoxyribonuclease III [Prevotella amnii CRIS 21A-A]
          Length = 249

 Score =  179 bits (453), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 65/260 (25%), Positives = 103/260 (39%), Gaps = 12/260 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +  N        + D  CLQETK ++             +     +
Sbjct: 1   MKFISWNVNGLRACVGKNFKEEFLALDADFFCLQETKMQEGQLDLS-FPGYESYWNYADK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K+ P+ +   +  ++ D + R I                       +   
Sbjct: 60  KGYSGTAIFTKHTPLSVSRGIGIEEHDHEGRVITLEMADFYLVTVYTPNSQDQLKRLPYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
              +               L+  +P+I  GD N+  +  D  NP     +A F+ E R+ 
Sbjct: 120 MQWETDFQSY------LHSLDKHKPVIVCGDMNVAHEEIDLKNPKSNHFNAGFSDEEREK 173

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
              L + GFTD  R  +     YS+W Y   +  KN G RID+ ++S      L  A+I 
Sbjct: 174 MTTLLSNGFTDTFRFLYPEQVTYSWWSYRFKAREKNIGWRIDYFLISDRLRESLEEAKIH 233

Query: 243 TKPRGWTKPSDHTPVIVSLD 262
           T+  G    SDH PV + L 
Sbjct: 234 TEILG----SDHCPVEIILK 249


>gi|315585908|gb|ADU40289.1| exodeoxyribonuclease III [Helicobacter pylori 35A]
          Length = 250

 Score =  179 bits (453), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 69/260 (26%), Positives = 114/260 (43%), Gaps = 13/260 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      +    + D+ C+QE+K +     FE  +          +
Sbjct: 1   MKLISWNVNGLRACMTKGFMDFFNSVDADVFCIQESKMQQDQNTFE-FKGYFDFWNCAIK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+GV   +K +P+ +   +  ++ D + R +   F     +  + N+Y P+     S 
Sbjct: 60  KGYSGVVTFTKKEPLSVSYGINMEEHDKEGRVVTCEFE----SFYLVNVYTPNSQQALSR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                   ++   R   + LEL++P+I  GD N+     D  NP     +A F+ E R  
Sbjct: 116 LSYRMSWEVE--FRKFLKALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L N GF D  R  +      Y++W Y   +  KN G RID+ + S    + L  A I
Sbjct: 174 FNELLNAGFIDTFRYFYPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALI 233

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
                G    SDH PV + L
Sbjct: 234 YKDILG----SDHCPVGLEL 249


>gi|21244621|ref|NP_644203.1| exodeoxyribonuclease III [Xanthomonas axonopodis pv. citri str.
           306]
 gi|21110303|gb|AAM38739.1| exodeoxyribonuclease III [Xanthomonas axonopodis pv. citri str.
           306]
          Length = 266

 Score =  179 bits (453), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 66/273 (24%), Positives = 112/273 (41%), Gaps = 24/273 (8%)

Query: 4   VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + ++N N +R A      AW    + D++C+QETK ++            Y       
Sbjct: 1   MRIISFNANGLRSAASKGFFAWFAAQDADVLCVQETKAQEHQLAGPDFLPTGYKAWFRDA 60

Query: 62  --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GVAI S+++P E+ T L   + D + R+IEA F      L + + Y+P G+  
Sbjct: 61  STKKGYSGVAIYSRHEPDEVRTALGWPEFDEEGRYIEARFG----NLSVVSFYIPSGS-S 115

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              + D K   ++       + L      +  GD+NI+    D  N    + ++      
Sbjct: 116 GELRQDYKFQVMQWLRPILDEWLASGRQYVLCGDWNIVRTALDIKNWKSNQKNSGCLPPE 175

Query: 180 RQSFQKLQN-----------MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
           R     L              G+ D+ R  H     Y++W     + + N G RID+ ++
Sbjct: 176 RDWLNGLCADAPEDASAADGRGWVDSYRVLHPQGQDYTWWSNRGAARANNVGWRIDYQLV 235

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           +P     L +  I  + R     SDH P IV  
Sbjct: 236 TPGLRDALKACSIYREER----FSDHAPYIVDY 264


>gi|237753149|ref|ZP_04583629.1| exodeoxyribonuclease LexA [Helicobacter winghamensis ATCC BAA-430]
 gi|229375416|gb|EEO25507.1| exodeoxyribonuclease LexA [Helicobacter winghamensis ATCC BAA-430]
          Length = 250

 Score =  179 bits (453), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 73/261 (27%), Positives = 120/261 (45%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      +    N D+ C+QE+K + +   F+   +   +  +  +
Sbjct: 1   MRLISWNVNGLRACMNKGFMEFFNSVNADVFCIQESKMQREQAEFD-FPNYEEYWNSAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+GVAI SK +P+ +   +     D + R I A F+       + N+Y P+       
Sbjct: 60  KGYSGVAIFSKIKPLSVEYDMGIAHHDKEGRIITAEFS----DFYLVNVYTPNSKRELER 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
              +     +   R   + LE ++P+I  GD N+  +  D  NP     +A FT E R+ 
Sbjct: 116 L--EYRMEWEDDFRTFLKNLESKKPVIVCGDLNVAHKEIDLKNPKTNRRNAGFTDEEREK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
              L + GFTD  R  +      Y++W Y   + + N G RID+ + S    S L SA I
Sbjct: 174 MSALLDSGFTDTYRHFYPEKQGAYTWWSYMGKARANNTGWRIDYFLCSKILDSRLKSASI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
             +  G    SDH PV + +D
Sbjct: 234 YPEILG----SDHCPVGIEID 250


>gi|260887970|ref|ZP_05899233.1| exodeoxyribonuclease III [Selenomonas sputigena ATCC 35185]
 gi|330838548|ref|YP_004413128.1| exodeoxyribonuclease III [Selenomonas sputigena ATCC 35185]
 gi|260862221|gb|EEX76721.1| exodeoxyribonuclease III [Selenomonas sputigena ATCC 35185]
 gi|329746312|gb|AEB99668.1| exodeoxyribonuclease III [Selenomonas sputigena ATCC 35185]
          Length = 250

 Score =  179 bits (453), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 65/260 (25%), Positives = 112/260 (43%), Gaps = 13/260 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +        K  + D+  +QETK + +    E L     +  +  +
Sbjct: 1   MRFVSWNVNGLRACLGKGFMQSFKALDADVFGVQETKMQPEQAILE-LTGYKQYWNSAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G A+ S+ +P+ +   L  ++ D + R I   F  +   + +       G    + 
Sbjct: 60  KGYSGTAVFSRIEPLSVSYGLGIEEHDHEGRVIALEFD-DLYFVTVYTPNSQRGLERLAY 118

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +        +   R     L+ ++P++  GD N+     D  NP     +A FT E R+ 
Sbjct: 119 R-----MTWEEAFRDYLLALDAKKPVVVCGDLNVAHTEIDLKNPKTNRKNAGFTDEEREK 173

Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             +L   GFTD  RA +     +Y++W Y   +   N G RID+ ++S      +  A I
Sbjct: 174 MTELLAAGFTDTFRALYPDKTGIYTWWSYLRKARETNAGWRIDYFLVSDRLAPKIKEATI 233

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
             +  G    SDH PV + L
Sbjct: 234 HNEVFG----SDHCPVGLVL 249


>gi|115353211|ref|YP_775050.1| exodeoxyribonuclease III Xth [Burkholderia ambifaria AMMD]
 gi|172062083|ref|YP_001809735.1| exodeoxyribonuclease III Xth [Burkholderia ambifaria MC40-6]
 gi|115283199|gb|ABI88716.1| exodeoxyribonuclease III Xth [Burkholderia ambifaria AMMD]
 gi|171994600|gb|ACB65519.1| exodeoxyribonuclease III Xth [Burkholderia ambifaria MC40-6]
          Length = 257

 Score =  179 bits (453), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 59/264 (22%), Positives = 111/264 (42%), Gaps = 14/264 (5%)

Query: 3   VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59
           ++ V T N+N IR A       W+ E N D +C+QE K    + P + ++      +   
Sbjct: 1   MMRVITANLNGIRSAAKKGFFEWLGEQNADCVCVQEIKVSADDLPADFVEPHGLRSYFHH 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G  + S+++P +++      + D + R++EA +      L + ++Y+P G+  
Sbjct: 61  AEKKGYSGAGMYSRHEPDDVIIGFGSSEFDPEGRYVEARYG----KLSVVSVYVPSGSSG 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +                  L+ +  +I  GD NI+ +  D  N    + ++    E 
Sbjct: 117 EERQQA--KYRFMDEFMPHLAELKSKREVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEE 174

Query: 180 RQSFQK-LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R    +   ++G+ D  R        Y++W     +++KN G RID+ + +P        
Sbjct: 175 RAWLTQLFDDVGYVDVFRTLDPRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGVAGTAKR 234

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
             I        K SDH P+ V  D
Sbjct: 235 TSIFKDI----KFSDHAPLTVDYD 254


>gi|308064283|gb|ADO06170.1| exodeoxyribonuclease III [Helicobacter pylori Sat464]
          Length = 250

 Score =  179 bits (453), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 70/260 (26%), Positives = 116/260 (44%), Gaps = 13/260 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      +    + DI C+QE+K + +   FE  +          +
Sbjct: 1   MKLVSWNVNGLRACMTKGFMDFFNSVDADIFCIQESKMQQEQNTFE-FKGYFDFWNCAIK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+GV   +K +P+ +   +  ++ D + R +   F +      + N+Y+P+     S 
Sbjct: 60  KGYSGVVTFTKKEPLSVSYGINIEEHDKEGRVVTCEFEL----FYLVNVYVPNSQQALSR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                   ++   R   + LEL++P+I  GD N+     D  NP     +A F+ E R  
Sbjct: 116 LSYRMSWEVE--FRKFLKALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L N GF D  R  +      Y++W Y   +  KN G RID+ + S    + L  A I
Sbjct: 174 FNELLNAGFIDTFRYFYPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSHPLKTRLKDALI 233

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
                G    SDH PV + L
Sbjct: 234 YKDILG----SDHCPVGLEL 249


>gi|320354727|ref|YP_004196066.1| exodeoxyribonuclease III Xth [Desulfobulbus propionicus DSM 2032]
 gi|320123229|gb|ADW18775.1| exodeoxyribonuclease III Xth [Desulfobulbus propionicus DSM 2032]
          Length = 481

 Score =  179 bits (453), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 61/258 (23%), Positives = 103/258 (39%), Gaps = 13/258 (5%)

Query: 5   TVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC--G 61
            + +WNVN +RA   +     + E + DI+ LQE K        +      Y        
Sbjct: 231 KLISWNVNGLRAVAKNGFLDVLHELDADILALQEIKAHPDQLDDQLRNVSGYQSFWHSAK 290

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y G A+ SK  P+ ++  +     D + R +   +        + N Y P+  P   
Sbjct: 291 KKGYAGTAVFSKIPPLRVLYGMEQPQFDDEGRVLTLEYP----DFYLINTYSPNAQPELK 346

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
                      R L     RL  E+ ++  GD N+  +  D  NP     +  F+ + R 
Sbjct: 347 RL--AFKQEFNRTLLAYMDRLRSEKTVVLCGDLNVAHKEIDLANPKANVKNPGFSEQERA 404

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
              +L   G+ D  R  +     Y++W Y  ++ +KN G RID+ ++   +   +  A I
Sbjct: 405 WMDELIAAGYVDTFRQFNQEAGQYTWWSYRFNARAKNIGWRIDYFIVDGSSRDRVLEAAI 464

Query: 242 DTKPRGWTKPSDHTPVIV 259
             +  G    SDH PV +
Sbjct: 465 HGEITG----SDHCPVSL 478


>gi|289771097|ref|ZP_06530475.1| exodeoxyribonuclease III [Streptomyces lividans TK24]
 gi|289701296|gb|EFD68725.1| exodeoxyribonuclease III [Streptomyces lividans TK24]
          Length = 274

 Score =  179 bits (453), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 53/267 (19%), Positives = 100/267 (37%), Gaps = 8/267 (2%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++TV + NVN +RA        W+   + D++CLQE + E    P        +H+    
Sbjct: 8   MLTVTSVNVNGLRAAAKKGFVEWLAGTSADVLCLQEVRAEPHQLPDHAGAPEGWHVTHAP 67

Query: 62  Q--KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
              K   GV++ ++ +P  +       + D   R++EA     T    +       G   
Sbjct: 68  AAAKGRAGVSLYTRREPDAVRVGFGSTEFDTSGRYVEADLPGVTVA-SLYLPSGEVGTER 126

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K      ++        +       ++  GD+NI  +  D  N    + ++ F  E 
Sbjct: 127 QDEKVRFMGEFLAYLKELRERAAAEGREVVVCGDWNIAHREADLKNWRANKKNSGFLPEE 186

Query: 180 RQSFQKLQNMGFTDAIRA----THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
           R+   ++ +      +        D    YS+W Y   ++  + G RID+ + +P   + 
Sbjct: 187 REWLGRVLDPAEGGYVDVVRALHPDVEGPYSWWSYRGRAFDNDAGWRIDYHVSTPGLAAK 246

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262
                ++       + SDH PV V  D
Sbjct: 247 AVKGYVERAATHAERWSDHAPVTVVYD 273


>gi|152992239|ref|YP_001357960.1| exodeoxyribonuclease III [Sulfurovum sp. NBC37-1]
 gi|151424100|dbj|BAF71603.1| exodeoxyribonuclease III [Sulfurovum sp. NBC37-1]
          Length = 256

 Score =  179 bits (453), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 67/265 (25%), Positives = 104/265 (39%), Gaps = 11/265 (4%)

Query: 1   MSVVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           M+  T  +WNVN IRA    N   WI E++ D + LQE K E    P    +  +Y  ++
Sbjct: 1   MAKTTFISWNVNGIRAVEKKNALKWIDESDIDFLGLQEIKAEADQIPDSIFEK-HYKFQS 59

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
               S  G + ++    +           D      E           +           
Sbjct: 60  INSSSRKGQSGVA----LFTNIKGTASGGDHIDILNEGRINEYHFGSYVLFNVYFPNGQR 115

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
           +  +   K+++ +RFL + ++     + +I  GD N   +  D   P   EN + F    
Sbjct: 116 SEERLAYKLAFYERFLAYINEVRTEGKSIIICGDVNTAHKEIDLARPKSNENTSGFLPVE 175

Query: 180 RQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R    KL + G+ D  R  H D    YS+W Y   +  +N G RID+  +S +    +  
Sbjct: 176 RAWMDKLLDNGYIDTFRYIHGDEPDRYSWWSYRTKARERNVGWRIDYFFVSDDLKEKIVD 235

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263
           A I     G    SDH PV + LDI
Sbjct: 236 ADILDHIMG----SDHCPVKLVLDI 256


>gi|260432325|ref|ZP_05786296.1| exodeoxyribonuclease III [Silicibacter lacuscaerulensis ITI-1157]
 gi|260416153|gb|EEX09412.1| exodeoxyribonuclease III [Silicibacter lacuscaerulensis ITI-1157]
          Length = 262

 Score =  179 bits (453), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 80/264 (30%), Positives = 119/264 (45%), Gaps = 10/264 (3%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQK 63
           T+ATWN+NS+R R   +   ++E +PD++CLQE K+     P E    L Y H+   GQK
Sbjct: 4   TLATWNINSVRLREPIVLKLLQEESPDVLCLQECKSPVDKIPTEGFAELGYTHMIARGQK 63

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            YNGVAILS+    ++           +    +    +      +     P G  +   +
Sbjct: 64  GYNGVAILSRLPITDLGDRDFAGLGHARHVAGQLENGVIIHNFYV-----PAGGDVPDRE 118

Query: 124 YDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180
            ++K      +L         E+P      GD NI P+  D ++          T  EV 
Sbjct: 119 VNEKFGQKLDYLTDMRDWFHAEKPQKSILVGDLNIAPREDDVWSHKQLLKVVSHTPIEVA 178

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHSA 239
              +     G+ D  R       LYS+W Y A  W   NKG R+DH+  +P+ ++  HS+
Sbjct: 179 HLAETQDAGGWVDITRQDIPEGQLYSWWSYRARDWDAANKGRRLDHVWATPDISNAGHSS 238

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
           RI    RGW KPSDH PV  + D+
Sbjct: 239 RILRDARGWEKPSDHAPVFATFDL 262


>gi|295107237|emb|CBL04780.1| exodeoxyribonuclease III [Gordonibacter pamelaeae 7-10-1-b]
          Length = 285

 Score =  179 bits (453), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 71/290 (24%), Positives = 108/290 (37%), Gaps = 35/290 (12%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA         + E + DI+ LQETK ++     +  Q   Y       
Sbjct: 1   MRFISWNVNGLRAVQKKGFEDIVCELDADIVALQETKLQEGQATLDLPQYREYWSYAEK- 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT-INTQTLRIGNLYLPHGNPITS 121
           K Y+G A+ +K QP++++  L  D LD + R +   F       +   N           
Sbjct: 60  KGYSGTAVFTKEQPLQVLHGLGSDYLDAEGRIVALEFPQFWFVDVYTPNAQNELARIAHR 119

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLI---------------------------FAGDY 154
            ++DD      + L       ++                                  GD+
Sbjct: 120 MEWDDAFRDFCKGLEEGVLPADVPVQRPAPGEGHVCISELPLTQPGETAAPKPVVMCGDF 179

Query: 155 NIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYAD 213
           N+  Q  D  NP      A F+ E R  F  L   GF D  R  H      YS+W Y   
Sbjct: 180 NVAHQEIDLKNPGPNRGKAGFSDEERGKFTDLLEAGFVDTFRRLHPDVTGAYSWWSYRFK 239

Query: 214 SWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +   N G RID+ ++S      + SA I  +  G    SDH PV + L++
Sbjct: 240 ARQNNAGWRIDYFLVSESLAPKVASACIYDEVYG----SDHCPVGLELEL 285


>gi|239981665|ref|ZP_04704189.1| exodeoxyribonuclease [Streptomyces albus J1074]
 gi|291453527|ref|ZP_06592917.1| exodeoxyribonuclease [Streptomyces albus J1074]
 gi|291356476|gb|EFE83378.1| exodeoxyribonuclease [Streptomyces albus J1074]
          Length = 264

 Score =  179 bits (453), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 56/264 (21%), Positives = 99/264 (37%), Gaps = 6/264 (2%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++TV T NVN +RA        W+   + D++CLQE + E+   P        +H+    
Sbjct: 1   MLTVTTANVNGLRAAAKKGYVEWLAATDADVVCLQEVRAEESQLPEAVRAPEGWHVVFAP 60

Query: 62  Q--KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
              K   GVA+L++  P  + T     + D   R++EA     T    +       G   
Sbjct: 61  AAAKGRAGVALLTRRAPERVRTGFGSAEFDTSGRYVEADLPGVTVA-SLYLPSGEVGTER 119

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K      +++      ++       ++  GD+NI  Q  D  N       + F  E 
Sbjct: 120 QDEKERFMAEFLEYLKELRARAAADGREVVVCGDWNIAHQEADLKNWKANRKSSGFLPEE 179

Query: 180 RQSFQKLQNMGFTDAIRA--THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
           R    ++        +      +    YS+W Y   ++  + G RID  + +P   +   
Sbjct: 180 RAWLDRVYAEAGYADVMRALHPEQAGPYSWWSYRGRAFDNDSGWRIDLHVATPGLAARAV 239

Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261
             +++       + SDH PV V  
Sbjct: 240 KGQVERAATHEERWSDHAPVTVVY 263


>gi|58040696|ref|YP_192660.1| exodeoxyribonuclease III [Gluconobacter oxydans 621H]
 gi|58003110|gb|AAW62004.1| Exodeoxyribonuclease III [Gluconobacter oxydans 621H]
          Length = 282

 Score =  179 bits (453), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 80/264 (30%), Positives = 125/264 (47%), Gaps = 6/264 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62
           + + TWN+NS+R R+  L   +++ NPDI+CLQETK  D  FP + L  +   H    G 
Sbjct: 18  MRLITWNINSLRLRLPLLKQIVEQENPDIVCLQETKVPDPLFPAQALAEMGLPHQIYKGM 77

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K YNGVAILS+++   +    P        R + A+       + + + Y+P G  I   
Sbjct: 78  KGYNGVAILSRHELQSVD-GTPDWCTRSDCRHVAASIATPAGPILLHDFYVPAGGDIPDP 136

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
           + ++K +    F+  A+       P      GD NI P  HD ++          T    
Sbjct: 137 EENEKFAHKLAFVDEATSWFTSTPPARSILVGDLNIAPLEHDVWSHKQLLKIVSHTPPEI 196

Query: 181 QSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLLHS 238
           +  +     GF DA+R        LY++W Y    W K N+G R+DH+ ++P+    L +
Sbjct: 197 ERLKAWMATGFQDAMRTITPEPEKLYTWWSYRNRDWKKSNRGRRLDHVWMTPDLMPGLRN 256

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
            R+  + R W  PSDH PV++  D
Sbjct: 257 VRVLQEVRDWGSPSDHVPVVLDFD 280


>gi|313114917|ref|ZP_07800415.1| exodeoxyribonuclease III [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310622794|gb|EFQ06251.1| exodeoxyribonuclease III [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 250

 Score =  179 bits (453), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 66/263 (25%), Positives = 109/263 (41%), Gaps = 16/263 (6%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60
           + + +WNVN +RA + H  A      + DI  +QETK +             Y  +  + 
Sbjct: 1   MKLISWNVNGLRACLTHGFAESFAALDADIFSVQETKMQPGQ---ADFAPDGYTEYTYSA 57

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+G A   + QP+ + T +  +  D + R +   +           +     N   
Sbjct: 58  EKKGYSGTACWCREQPLSVTTGIGIEQHDHEGRVLTLEYPG------FWLVNCYTPNSQD 111

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             K  D     +   R     L+ ++P+I  GD N+  +  D  N       A FT + R
Sbjct: 112 GLKRLDYRMEWEDAFRAYLLALDAKKPVILCGDLNVAHREIDIKNDKTNHMSAGFTDQER 171

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
               +L + GF D+ R  H     YS+W Y   +  KN G RID+ ++S      + +A 
Sbjct: 172 GKMTELLDAGFADSFRVLHPDEVKYSWWSYRFHAREKNAGWRIDYFIVSRRIADKIRAAE 231

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263
           I  +  G    SDH PV + +D+
Sbjct: 232 IHNEIFG----SDHCPVELDIDL 250


>gi|258648040|ref|ZP_05735509.1| exodeoxyribonuclease III [Prevotella tannerae ATCC 51259]
 gi|260851895|gb|EEX71764.1| exodeoxyribonuclease III [Prevotella tannerae ATCC 51259]
          Length = 250

 Score =  179 bits (453), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 67/261 (25%), Positives = 102/261 (39%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA          +  + D  CLQETK ++             +     +
Sbjct: 1   MKFISWNVNGLRAVDGKGFRDIFRAIDADFFCLQETKMQEGQLDI-AFDGYESYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K++P+ +   L  D+ D + R I                       +   
Sbjct: 60  KGYSGTAIFTKHKPLSVQIGLGIDEHDHEGRVITLELDDFYLVCVYTPNSQDELRRLDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +   +    +L+  +P+I  GD N+  Q  D  NP     +A FT E R+ 
Sbjct: 120 M------IWEEAFQAHLHKLDAHKPVIVCGDMNVAHQEIDLKNPKTNRRNAGFTDEEREK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             +L + GF D  R  H      YS+W Y   +  KN G RID+ ++S      L  A I
Sbjct: 174 MTQLLSNGFIDTFRYFHPDLTGAYSWWSYRFRAREKNTGWRIDYFLVSERLKPRLVEANI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
                G    SDH PV + L 
Sbjct: 234 HNDIMG----SDHCPVELILK 250


>gi|32475225|ref|NP_868219.1| exodeoxyribonuclease [Rhodopirellula baltica SH 1]
 gi|32445766|emb|CAD78497.1| exodeoxyribonuclease [Rhodopirellula baltica SH 1]
          Length = 256

 Score =  179 bits (453), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 71/262 (27%), Positives = 123/262 (46%), Gaps = 13/262 (4%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IET 59
            + + +WNVN IRA +      +++   PD++CLQETK E +         L YH    T
Sbjct: 4   TLKLISWNVNGIRASMDKGFREFVESEQPDVLCLQETKAEPEQVDLSWADELGYHQVWNT 63

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             ++ Y+GV+  S+ +P+++   L  ++ D + R +  TF                 +  
Sbjct: 64  ATKRGYSGVSTWSRVEPLKVTKGLSIEEHDNEGRVLTTTFDDFHL-----VNVYTPNSQR 118

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              + D ++ W + FL +  + L   +P++F GD N   +  D  NP     +A F+ + 
Sbjct: 119 GLARLDYRMQWDEAFLDYVKK-LNRRKPVLFCGDVNCAHKEIDLANPKANRKNAGFSDQE 177

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R     +   GF D+ R  HD    YS+W Y +D+ ++N G R+D+  ++      +  A
Sbjct: 178 RAGLDAVTEAGFIDSFRQFHDGPGHYSWWTYRSDARARNIGWRLDYFWVAKNFWDRVADA 237

Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261
           RI  +  G    SDH PV ++L
Sbjct: 238 RIRCEIHG----SDHCPVELTL 255


>gi|260584873|ref|ZP_05852618.1| exodeoxyribonuclease III [Granulicatella elegans ATCC 700633]
 gi|260157530|gb|EEW92601.1| exodeoxyribonuclease III [Granulicatella elegans ATCC 700633]
          Length = 253

 Score =  178 bits (452), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 70/262 (26%), Positives = 119/262 (45%), Gaps = 14/262 (5%)

Query: 4   VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPF-ETLQSLNYHIETC 60
           + + TWNVN IR+ ++   L  ++ E  PDI+CLQETK + +           + +  + 
Sbjct: 1   MKLTTWNVNGIRSVLNKGALQEYVLEAQPDILCLQETKAQPEQVDLGMEFAGYHAYWNSA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+G AI +K +PI +   L  ++ D + R I A +                   ++
Sbjct: 61  VKKGYSGTAIFTKEEPISVQYGLGIEEHDQEGRVITAEYADYYLVTVYTPNAKRDLTRLS 120

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +        +       ++LE  +P+IF GD N+  +  D  NP     +A FT E R
Sbjct: 121 YRQ------VWEDDFLAFIKKLEETKPVIFCGDLNVAHKEIDLANPKTNTKNAGFTKEER 174

Query: 181 QSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           + F ++   G  DA R  +      Y++W Y   + ++N G RID+ ++S   TS +   
Sbjct: 175 EKFDQIVENGLVDAFRFRYPEAVGAYTWWSYMGGARARNIGWRIDYFVVSEVLTSRIQEV 234

Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261
           +I     G    SDH PV + +
Sbjct: 235 KIRADVTG----SDHCPVEMEI 252


>gi|312898827|ref|ZP_07758215.1| exodeoxyribonuclease III [Megasphaera micronuciformis F0359]
 gi|310619989|gb|EFQ03561.1| exodeoxyribonuclease III [Megasphaera micronuciformis F0359]
          Length = 250

 Score =  178 bits (452), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 72/261 (27%), Positives = 113/261 (43%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +        KE + DI CLQETK +      + L     +     +
Sbjct: 1   MKFISWNVNGLRAVMKKGFPEIFKELDADIFCLQETKLQAGQIEMD-LPGYEQYWNYADK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI ++ +P+ +   +  D+ D + R I   F                 +     
Sbjct: 60  KGYSGTAIFTRIKPLSVSYGMNIDEHDHEGRLITLEFEDFYFI-----TCYTPNSQSELA 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           + D ++ W   F  + ++ L   +P+IF GD N+  +  D  NP     +A F+ E R  
Sbjct: 115 RLDYRMRWEDDFRNYVTE-LNRTKPVIFCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             +L   GFTD  R  +     +YS+W Y   +   N G RID+ + S    S L  A I
Sbjct: 174 MTELLAAGFTDTWRYFYPDKEGVYSWWSYRFKARQNNSGWRIDYFITSSALDSRLKEALI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            T   G    SDH PV + ++
Sbjct: 234 YTNIEG----SDHCPVGLVIE 250


>gi|75674284|ref|YP_316705.1| exodeoxyribonuclease III xth [Nitrobacter winogradskyi Nb-255]
 gi|74419154|gb|ABA03353.1| exodeoxyribonuclease III xth [Nitrobacter winogradskyi Nb-255]
          Length = 295

 Score =  178 bits (452), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 73/269 (27%), Positives = 119/269 (44%), Gaps = 9/269 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62
           +T+ TWN+NS+R RI  +A ++K   PD++CLQETK  D  FP +    L Y HI   GQ
Sbjct: 27  LTLTTWNINSVRLRIDLVARFLKAQRPDVLCLQETKCPDDAFPLKRFHRLGYEHIALNGQ 86

Query: 63  KSYNGVAILSKYQPI--EIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           K Y+GVA++SK       I T     D    +  +     +    +         G+   
Sbjct: 87  KGYHGVAVVSKLPFDASNIRTFCDKIDSRHVSVILGGEAGLAAPLVLHNFYVPAGGDIPD 146

Query: 121 ---STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
              + K+  K+ ++      A    +  +  +  GD N+ P  +D ++          T 
Sbjct: 147 PALNPKFAHKLQFLDEMKGCAPLHPDNGDRHVLVGDLNVAPHENDVWSHKQLLKIVSHTP 206

Query: 178 EVRQSFQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATS 234
              +    +Q+       A      +  +Y++W Y A  W + N+G R+DHI +S     
Sbjct: 207 IECEKLLGVQDRGNWVDIARARIPMSEKVYTWWSYRAADWVAANRGRRLDHIWVSEALRD 266

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            +   RI    RGW +PSDH PV   +++
Sbjct: 267 GIRDFRITRDARGWERPSDHVPVTAVIEV 295


>gi|21221611|ref|NP_627390.1| exodeoxyribonuclease [Streptomyces coelicolor A3(2)]
 gi|6138859|emb|CAB59670.1| putative exodeoxyribonuclease (EC 3.1.11.2) (putative secreted
           protein) [Streptomyces coelicolor A3(2)]
          Length = 274

 Score =  178 bits (452), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 53/267 (19%), Positives = 100/267 (37%), Gaps = 8/267 (2%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++TV + NVN +RA        W+   + D++CLQE + E    P        +H+    
Sbjct: 8   MLTVTSVNVNGLRAAAKKGFVEWLAGTSADVLCLQEVRAEPHQLPDHAGAPEGWHVTHAP 67

Query: 62  Q--KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
              K   GV++ ++ +P  +       + D   R++EA     T    +       G   
Sbjct: 68  AAAKGRAGVSLYTRREPDAVRVGFGSTEFDTSGRYVEADLPGVTVA-SLYLPSGEVGTER 126

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K      ++        +       ++  GD+NI  +  D  N    + ++ F  E 
Sbjct: 127 QDEKVRFMGEFLAYLKELRERAAAQGREVVVCGDWNIAHREADLKNWRANKKNSGFLPEE 186

Query: 180 RQSFQKLQNMGFTDAIRA----THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
           R+   ++ +      +        D    YS+W Y   ++  + G RID+ + +P   + 
Sbjct: 187 REWLGRVLDPAEGGYVDVVRALHPDVEGPYSWWSYRGRAFGNDAGWRIDYHVSTPGLAAK 246

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262
                ++       + SDH PV V  D
Sbjct: 247 AVKGYVERAATHAERWSDHAPVTVVYD 273


>gi|170743018|ref|YP_001771673.1| exodeoxyribonuclease III Xth [Methylobacterium sp. 4-46]
 gi|168197292|gb|ACA19239.1| exodeoxyribonuclease III Xth [Methylobacterium sp. 4-46]
          Length = 269

 Score =  178 bits (452), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 78/267 (29%), Positives = 123/267 (46%), Gaps = 7/267 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62
           +TV+TWN+NS+R RI  +  ++ E  PD++CLQETK  +  FP + LQ   Y H+   GQ
Sbjct: 3   LTVSTWNINSVRLRIDLVRRFLDEARPDVLCLQETKCPNDRFPLKELQGFGYPHVVFAGQ 62

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLD-VQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           K YNGVAILS+   +        D  D      +          + + + Y+P G  +  
Sbjct: 63  KGYNGVAILSRLPLLSQEVMSFCDRPDARHISAVLGPEAGEAAGIVLHDFYVPAGGDVPD 122

Query: 122 TKYDDKISWIKRFLRFASQR--LELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-E 178
              +DK +    F+             P I  GD N+ P  HD ++     +    T  E
Sbjct: 123 AALNDKFAHKLAFMDELRAWGGKRPTGPAILVGDLNVAPLEHDVWSHRQLLDVVSHTPVE 182

Query: 179 VRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLL 236
             +        G+ D +R        +Y++W Y +  W + +KG R+DHI ++ +    +
Sbjct: 183 TERLETLRGEAGWVDTMRHLRPEPEKIYTWWSYRSPDWAAADKGRRLDHIWVTADLAGSV 242

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263
            +  +    R W +PSDH PV V LD+
Sbjct: 243 KAVTVARHARAWERPSDHVPVTVELDL 269


>gi|85714109|ref|ZP_01045098.1| exodeoxyribonuclease III xth [Nitrobacter sp. Nb-311A]
 gi|85699235|gb|EAQ37103.1| exodeoxyribonuclease III xth [Nitrobacter sp. Nb-311A]
          Length = 271

 Score =  178 bits (452), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 75/269 (27%), Positives = 117/269 (43%), Gaps = 9/269 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62
           +T  TWN+NS+R RI  +A ++K   PD++CLQETK  D  FP +  + L Y H+   GQ
Sbjct: 3   LTFTTWNINSVRLRIDLVAKFLKAQRPDVLCLQETKCPDDAFPLKRFRQLGYDHVALNGQ 62

Query: 63  KSYNGVAILSKYQPIEIV-THLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT- 120
           K Y+GVA++SK                      I          L + N Y+P G  I  
Sbjct: 63  KGYHGVAVVSKLPFDASNIRTFCDKIDSRHVSVIFGGQAGLAAPLVLHNFYVPAGGDIPD 122

Query: 121 ---STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
              + K+  K+ ++      A       +  +  GD N+ P  +D ++          T 
Sbjct: 123 PAMNPKFAHKLQFLDEMKACAPLHPGNGDRHVLVGDLNVAPHENDVWSHRQLLKIVSHTP 182

Query: 178 EVRQS--FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATS 234
              +     +        A      +  +Y++W Y A  W + ++G R+DHI +S    S
Sbjct: 183 IECEKLLGVQKHGNWVDIARARIPMSEKIYTWWSYRAADWIASDRGRRLDHIWVSEALRS 242

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            +   RI    RGW +PSDH PV   +D+
Sbjct: 243 GIRDFRITRDARGWQRPSDHVPVTAVIDV 271


>gi|170051904|ref|XP_001861978.1| conserved hypothetical protein [Culex quinquefasciatus]
 gi|167872934|gb|EDS36317.1| conserved hypothetical protein [Culex quinquefasciatus]
          Length = 340

 Score =  178 bits (452), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 69/263 (26%), Positives = 112/263 (42%), Gaps = 13/263 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           V +++WNV  +R+ +      +++   PDI+CLQETK  +   P E      YH     +
Sbjct: 88  VKISSWNVAGLRSWVEKGCLEFLEHEAPDILCLQETKCTEDQLPEEARHIKGYHPYWLCK 147

Query: 63  KSYN-GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
                GVAI SK  P  +   L   + D   R + A +        +  +Y+P+      
Sbjct: 148 PGGYAGVAIYSKKMPFNVSYGLGDAEQDEDGRLLTAEYE----KFYLVCVYVPNAGRKLV 203

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
           T    K            + L+ ++P+I  GD N+     D  NP   + +A FT E R 
Sbjct: 204 TL--PKRMRWDEKFLQYLRDLDAKKPVILCGDMNVAHAEIDLANPKTNKKNAGFTQEERD 261

Query: 182 SFQKLQNMGFTDAIRATHDTHHL-YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
               L + GF D  R  +      Y+FW Y  ++ +KN G R+D+ + S      +  + 
Sbjct: 262 GMTNLLSHGFVDTFRQRYPEQKAAYTFWTYMGNARAKNVGWRLDYFIASERLAGRVVDSV 321

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263
           I     G    SDH P+ + L++
Sbjct: 322 IRPGVYG----SDHCPITLLLNL 340


>gi|144897972|emb|CAM74836.1| Endonuclease/exonuclease/phosphatase [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 262

 Score =  178 bits (452), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 78/264 (29%), Positives = 121/264 (45%), Gaps = 6/264 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62
           + V TWN+NSIR R   L   ++   PD+ICLQE K  D+ FP +  +SL + HI   G 
Sbjct: 1   MRVVTWNINSIRLRFDLLRQVVERLTPDVICLQEIKVVDELFPADECRSLGFPHIAFHGM 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K YNGVAILSK    E +T       D +    +                    +P  + 
Sbjct: 61  KGYNGVAILSKRPIRETMTPSWCGRDDRRHLVAKLDEAEIHCLYV--PAGGDIPDPQQND 118

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           K+  K+ ++++   + +   +  + +I  GD N+ P   D ++          T      
Sbjct: 119 KFAHKLDFLRQVTDWYAGTYKPGDRVILTGDLNVAPLETDVWSHKQLLKVVSHTPIEVDL 178

Query: 183 FQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSWSKN-KGIRIDHIMLSPEATSLLHSA 239
             ++Q          R    +  LY++W Y +  W KN +G R+DH+ ++P     L S 
Sbjct: 179 LDRMQASLGWVDAMRRFIPPSERLYTWWSYRSPDWEKNDRGRRLDHVWVTPALGDTLRSV 238

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
            +  + R WT+PSDH PV+V LDI
Sbjct: 239 EVLRECRSWTQPSDHVPVLVELDI 262


>gi|295101467|emb|CBK99012.1| exodeoxyribonuclease III [Faecalibacterium prausnitzii L2-6]
          Length = 250

 Score =  178 bits (452), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 68/263 (25%), Positives = 117/263 (44%), Gaps = 16/263 (6%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60
           + + +WNVN +RA + H+ AA     + D+  +QETK +             Y  +  + 
Sbjct: 1   MKLISWNVNGLRACLTHDFAASFAALDADVFSVQETKMQPGQ---ADFAPEGYTEYTYSA 57

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+G A   K  P+ + T +  ++ D + R +   +                 +   
Sbjct: 58  EKKGYSGTACWCKTVPLSVTTGIGIEEHDHEGRVLTLEYPE-----SYLVNCYTPNSQDG 112

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             + D +++W   F  +  + L+ ++P+I  GD N+  Q  D  N       A FT + R
Sbjct: 113 LKRLDYRMTWEDAFRAYLLE-LDAKKPVILCGDLNVAHQEIDIKNAKTNRMSAGFTDQER 171

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
               +L  +GFTD+ RA H     YS+W Y   +  KN G RID+ ++S      + +A 
Sbjct: 172 AKMTELLAVGFTDSFRAIHPDEVKYSWWSYRFHAREKNAGWRIDYFIVSNRIADKIKAAE 231

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263
           I  +  G    SDH PV + +D+
Sbjct: 232 IHNEVFG----SDHCPVELDIDL 250


>gi|188528295|ref|YP_001910982.1| exodeoxyribonuclease III [Helicobacter pylori Shi470]
 gi|188144535|gb|ACD48952.1| exodeoxyribonuclease [Helicobacter pylori Shi470]
          Length = 250

 Score =  178 bits (452), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 69/260 (26%), Positives = 115/260 (44%), Gaps = 13/260 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      +    + D+ C+QE+K +     FE  +          +
Sbjct: 1   MKLVSWNVNGLRACMTKGFMDFFNSVDADVFCIQESKMQQDQNTFE-FKGYFDFWNCAIK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+GV   +K +P+ +   +  ++ D + R +   F +      + N+Y+P+     S 
Sbjct: 60  KGYSGVVTFTKKEPLSVSYGINIEEHDKEGRVVTCEFEL----FYLVNVYVPNSQQALSR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                   ++   R   + LEL++P+I  GD N+     D  NP     +A F+ E R  
Sbjct: 116 LSYRMSWEVE--FRKFLKALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L N GF D  R  +      Y++W Y   +  KN G RID+ + S    + L  A I
Sbjct: 174 FNELLNAGFIDTFRYFYPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSHPLKTRLKDALI 233

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
                G    SDH PV + L
Sbjct: 234 YKDILG----SDHCPVGLEL 249


>gi|326202355|ref|ZP_08192224.1| exodeoxyribonuclease III [Clostridium papyrosolvens DSM 2782]
 gi|325987473|gb|EGD48300.1| exodeoxyribonuclease III [Clostridium papyrosolvens DSM 2782]
          Length = 253

 Score =  178 bits (452), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 70/262 (26%), Positives = 118/262 (45%), Gaps = 13/262 (4%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           +  + +WNVN +R+ I      + KE + DI C+QETK ++     E ++   ++     
Sbjct: 1   MTKLVSWNVNGLRSCIGKGFWDFFKEVDADIFCVQETKLQEGQLELE-IEGYEHYWNYAV 59

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G AI +K +P+     +  ++ D + R I   F           + +   N    
Sbjct: 60  KKGYSGTAIFTKIKPVSSSCGIGIEEHDNEGRVITLEFE------EFFLVNVYTPNSKRE 113

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            +  +     +   R   ++LE  +P+I  GD N+  Q  D  NP   +  A FT+E R+
Sbjct: 114 LERLEYRMKWEDDFREYLKQLEQTKPVIICGDMNVAHQEIDLKNPRSNKRSAGFTMEERE 173

Query: 182 SFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            F +L   GF D  R  +      Y++W Y   S  KN G RID+  +S      + +A 
Sbjct: 174 KFSQLLEHGFVDTFRMLYPDKTGAYTWWSYMFKSREKNAGWRIDYFCVSGALKDRIEAAE 233

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I +   G    SDH PV +++ 
Sbjct: 234 IYSDTMG----SDHCPVGLTIK 251


>gi|188588613|ref|YP_001921245.1| exodeoxyribonuclease III [Clostridium botulinum E3 str. Alaska E43]
 gi|188498894|gb|ACD52030.1| exodeoxyribonuclease III [Clostridium botulinum E3 str. Alaska E43]
          Length = 251

 Score =  178 bits (452), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 71/257 (27%), Positives = 118/257 (45%), Gaps = 13/257 (5%)

Query: 5   TVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
            + +WNVN +RA +       +KE+N DI C+QE+K ++        +  +Y      +K
Sbjct: 3   KLISWNVNGLRACVKKGFLDILKESNADIFCIQESKLQEGQIDLNLEEYYDY-WNYAEKK 61

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            Y+G A+ SK +P+ I   +  ++ D + R +   F        + N+Y P+     +  
Sbjct: 62  GYSGTAVFSKEKPLNISLGIGIEEHDKEGRVLTLEFE----EFYLVNVYTPNSQQKLARI 117

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
             D     +   R     L  ++ +I  GD N+  +  D  NP    N+A F+ E R+ F
Sbjct: 118 --DYRMAWENDFRDYLNELNKDKSVIVCGDLNVAHKEIDLKNPKNNRNNAGFSDEEREKF 175

Query: 184 QKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
            +L   GF D  R  +      YS+W Y  ++ + N G RID+ ++S +    L  A I 
Sbjct: 176 DELLKSGFIDTYRYFYPDKEGAYSWWSYRFNARANNAGWRIDYFLVSKDFEDRLVDANIH 235

Query: 243 TKPRGWTKPSDHTPVIV 259
           T+  G    SDH PV +
Sbjct: 236 TQIEG----SDHCPVEL 248


>gi|163844025|ref|YP_001628429.1| exodeoxyribonuclease III (xth) [Brucella suis ATCC 23445]
 gi|163674748|gb|ABY38859.1| exodeoxyribonuclease III (xth) [Brucella suis ATCC 23445]
          Length = 268

 Score =  178 bits (452), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 76/266 (28%), Positives = 123/266 (46%), Gaps = 9/266 (3%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64
           +ATWN+NS+R R+  +  ++++  PD++CLQETK  D  FP +  ++L Y HI   GQK 
Sbjct: 5   IATWNINSVRLRMPLVEQFLRDYQPDVLCLQETKCPDDLFPAKGFRALGYEHIAISGQKG 64

Query: 65  YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124
           Y+GVA +S+     +             R + A      + LRI N Y+P G      + 
Sbjct: 65  YHGVATVSRRPLDGVEK--VDFCNMGDCRHLSAVVEAGDRKLRIHNFYVPAGGDEPDPEI 122

Query: 125 DDKISWIKRF---LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180
           + K +    F   +R      +     +  GD NI P  +D ++          T  E  
Sbjct: 123 NPKFAHKLAFLEEMRAIIADRKDGCSSLLVGDLNIAPLENDVWSHKQLLKIVSHTPIETE 182

Query: 181 QSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHS 238
                    G++D +R        +Y++W Y A  W   ++G R+DH+  S +  S +  
Sbjct: 183 TLENLRIKGGWSDLMRHLIAADQKIYTWWSYRAKDWDAADRGRRLDHVWGSADLESHIKG 242

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIP 264
            ++    RGW +PSDH PVI + D+ 
Sbjct: 243 LQVLRDARGWDRPSDHVPVIATFDLD 268


>gi|299143331|ref|ZP_07036411.1| exodeoxyribonuclease III [Peptoniphilus sp. oral taxon 386 str.
           F0131]
 gi|298517816|gb|EFI41555.1| exodeoxyribonuclease III [Peptoniphilus sp. oral taxon 386 str.
           F0131]
          Length = 250

 Score =  178 bits (452), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 71/261 (27%), Positives = 113/261 (43%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA I         E N D+  LQE K  +    FE L+    +     +
Sbjct: 1   MKLVSWNVNGLRAVIKKGFVDSFNEINADVFALQEIKLSEGQLDFE-LEGYKMYYNYAQR 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI ++ +PI +   +  ++ D + R I A F                 +     
Sbjct: 60  KGYSGTAIFTRIEPISVSYGIGMEEHDTEGRVITAEFEKFYF-----VTCYTPNSKRGLE 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           + + ++ W     R    +L   +P++  GD N+  +  D  NP     +A FT E R  
Sbjct: 115 RLEYRMVWE-DVFRNYLNKLRETKPVVLCGDLNVAHEEIDLANPATNHKNAGFTNEERSK 173

Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L   G+ D  R  +      YS+W  +A S  +N G RID+ ++S E    L  A+I
Sbjct: 174 FTELLKSGYIDTFRYFYPDRKDEYSWWSNFAKSRERNIGWRIDYFVVSEELKGNLSDAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
                G    SDH PV + L+
Sbjct: 234 HQSVMG----SDHCPVELVLE 250


>gi|257465990|ref|ZP_05630301.1| exodeoxyribonuclease III [Fusobacterium gonidiaformans ATCC 25563]
 gi|315917146|ref|ZP_07913386.1| exodeoxyribonuclease III [Fusobacterium gonidiaformans ATCC 25563]
 gi|313691021|gb|EFS27856.1| exodeoxyribonuclease III [Fusobacterium gonidiaformans ATCC 25563]
          Length = 250

 Score =  178 bits (452), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 71/261 (27%), Positives = 112/261 (42%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN IRA +      + +  + DI CLQETK        + L+  + +     +
Sbjct: 1   MKLISWNVNGIRACLKKGFMEYFEAQDADIFCLQETKCSAGQVELD-LKGYHQYWNYAVK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +PI +   L  ++ D + R I   F                   +   
Sbjct: 60  KGYSGTAIFTKKEPISVSYGLGIEEHDQEGRVITLEFEDFYMVTVYTPNSKNELERLDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +   R    +L   +P++  GD N+  +  D  NP     +A FT E R  
Sbjct: 120 M------VWEDEFRSYLAKLNEAKPVVVCGDMNVAHEEIDLKNPKTNRRNAGFTDEERSK 173

Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L   GFTD+ R  +    H YS+W Y A++   N G RID+ ++S +    +  A I
Sbjct: 174 FTELLKAGFTDSFRYLYPDRLHAYSWWSYRANARKNNTGWRIDYFVVSNDWKEQIQEAEI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
             +  G    SDH PV + L 
Sbjct: 234 HAEQEG----SDHCPVALYLK 250


>gi|327540346|gb|EGF26932.1| exodeoxyribonuclease III [Rhodopirellula baltica WH47]
          Length = 256

 Score =  178 bits (452), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 71/262 (27%), Positives = 124/262 (47%), Gaps = 13/262 (4%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IET 59
            + + +WNVN IRA +      +++   PD++CLQETK E +         L YH    T
Sbjct: 4   TLKLISWNVNGIRASMDKGFREFVESEQPDVLCLQETKAEPEQVDLSWADELGYHQVWNT 63

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             ++ Y+GV+  S+ +P+++   L  ++ D + R +  TF                 +  
Sbjct: 64  ATKRGYSGVSTWSRVEPLKVTKGLSIEEHDNEGRVLTTTFDDFHL-----VNVYTPNSQR 118

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              + D ++ W + FL +  + L   +P++F GD N   +  D  NP     +A F+ + 
Sbjct: 119 GLARLDYRMQWDEAFLDYVKK-LNRRKPVLFCGDVNCAHKEIDLANPKANRKNAGFSDQE 177

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R     +   GF D+ R  HD    YS+W Y +D+ ++N G R+D+  ++ +    +  A
Sbjct: 178 RAGLDAVTEAGFIDSFRQFHDGPGHYSWWTYRSDARARNIGWRLDYFWVAKKFWDRVADA 237

Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261
           RI  +  G    SDH PV ++L
Sbjct: 238 RIRCEIHG----SDHCPVELTL 255


>gi|299068294|emb|CBJ39515.1| putative exodeoxyribonuclease III/endonuclease/phosphatase
           [Ralstonia solanacearum CMR15]
          Length = 261

 Score =  178 bits (452), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 60/264 (22%), Positives = 112/264 (42%), Gaps = 12/264 (4%)

Query: 3   VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++ + + N+N +R A       W+ + + D +C+QE K    +   E L    YH     
Sbjct: 1   MLRIISANLNGVRSAASKGFFEWMGKQDADFVCVQELKCAQDDMTPEFLAPHGYHSVFQH 60

Query: 62  --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G  + ++++P +++    G + D + R++EA +      L I ++Y+P G+  
Sbjct: 61  AVKKGYSGAGLYARHKPDDVIVGFDGGEFDAEGRYVEARYG----KLSIISVYVPSGSSG 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +                 R E    ++  GD NI+ +  D  N    + ++    E 
Sbjct: 117 EERQQAKFRFMDLFMQHLTDLRHEKGREVVLCGDVNIVHKEIDIKNWKGNQKNSGCLPEE 176

Query: 180 RQSFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R    +L +  G+ D  R        Y++W     +++KN G RID+ + +P   +   S
Sbjct: 177 RAWLTRLFDEVGYVDVFRTLDPRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGIAATARS 236

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
             I        K SDH P+ V  D
Sbjct: 237 TSIFRDI----KFSDHAPLTVDYD 256


>gi|257452215|ref|ZP_05617514.1| exodeoxyribonuclease III [Fusobacterium sp. 3_1_5R]
 gi|317058758|ref|ZP_07923243.1| exodeoxyribonuclease III [Fusobacterium sp. 3_1_5R]
 gi|313684434|gb|EFS21269.1| exodeoxyribonuclease III [Fusobacterium sp. 3_1_5R]
          Length = 250

 Score =  178 bits (452), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 71/261 (27%), Positives = 112/261 (42%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN IRA +      + +  + DI CLQETK        + L+  + +     +
Sbjct: 1   MKLISWNVNGIRACLKKGFMEYFEAQDADIFCLQETKCSAGQVELD-LKGYHQYWNYAVK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +PI +   L  ++ D + R I   F                   +   
Sbjct: 60  KGYSGTAIFTKKEPISVSYGLGIEEHDQEGRVITLEFEDFYMVTVYTPNSKNELERLDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +   R    +L   +P++  GD N+  +  D  NP     +A FT E R  
Sbjct: 120 M------IWEDEFRSYLAKLNEAKPVVVCGDMNVAHEEIDLKNPKTNRRNAGFTDEERTK 173

Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L   GFTD+ R  +    H YS+W Y A++   N G RID+ ++S +    +  A I
Sbjct: 174 FTELLKAGFTDSFRYLYPDRLHAYSWWSYRANARKNNTGWRIDYFVVSNDWKEQIQEAEI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
             +  G    SDH PV + L 
Sbjct: 234 HAEQEG----SDHCPVALYLK 250


>gi|261366200|ref|ZP_05979083.1| exodeoxyribonuclease III [Subdoligranulum variabile DSM 15176]
 gi|282572018|gb|EFB77553.1| exodeoxyribonuclease III [Subdoligranulum variabile DSM 15176]
          Length = 251

 Score =  178 bits (452), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 69/264 (26%), Positives = 111/264 (42%), Gaps = 17/264 (6%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60
           +   +WNVN +RA +        +  + D  C+QETK +             Y  +I + 
Sbjct: 1   MKFVSWNVNGLRACLKKGFEETFRTLDADFFCIQETKMQPGQ---ADFAPEGYTEYIYSA 57

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+G AI ++   + +   L  D  + + R I   +        + NLY+P+     
Sbjct: 58  DKKGYSGTAIWARTPALSVRYGLEEDLHNHEGRAITLEYP----DFYLVNLYVPNSQNEL 113

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
           +    D     +  LR   Q L+ ++P+I  GD N+     D  NP      A F+ + R
Sbjct: 114 ARI--DYRMQWEDDLRRYLQALDAQKPVILCGDLNVAHTEIDLKNPGPNRGAAGFSDQER 171

Query: 181 QSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
               +L   GFTD  R  H     +YS+W     +  +N G RID+ ++S      +  A
Sbjct: 172 GKLDELLAAGFTDTFRHLHPDATGIYSWWSMRFRARERNAGWRIDYFLVSNRLAPQIRKA 231

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
            I     G    SDH PV + LD+
Sbjct: 232 DILMDILG----SDHCPVTLELDL 251


>gi|167835000|ref|ZP_02461883.1| exodeoxyribonuclease III [Burkholderia thailandensis MSMB43]
          Length = 256

 Score =  178 bits (452), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 63/264 (23%), Positives = 112/264 (42%), Gaps = 14/264 (5%)

Query: 3   VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59
           ++ V T N+N IR A       W+ E + D +C+QE K    + P E ++   +  +   
Sbjct: 1   MLRVITANLNGIRSAAKKGFFDWLGEQSADCVCVQEIKVSADDLPAEFVEPHGFRSYFHH 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G  + S+ +P +++      + D + R++EA F      L + ++Y+P G+  
Sbjct: 61  AEKKGYSGAGLYSRREPDDVIIGYGSSEFDSEGRYVEARFG----KLSVVSVYVPSGSSG 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +                  L+ +  +I  GD NI+ +  D  N    + ++    E 
Sbjct: 117 DERQQA--KYRFMDEFMPHLAELKAKREVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEE 174

Query: 180 RQSFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R    KL +  G+ D  R        Y++W     +++KN G RID+ + +P       S
Sbjct: 175 RAWLTKLFDEVGYVDVFRTLDQRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGVAGTAKS 234

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
             I        K SDH P+ V  D
Sbjct: 235 TAIFRDV----KFSDHAPLTVDYD 254


>gi|320529778|ref|ZP_08030856.1| exodeoxyribonuclease III [Selenomonas artemidis F0399]
 gi|320138017|gb|EFW29921.1| exodeoxyribonuclease III [Selenomonas artemidis F0399]
          Length = 250

 Score =  178 bits (451), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 72/260 (27%), Positives = 117/260 (45%), Gaps = 13/260 (5%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +        KE + D  CLQETK ++     + L     +  +  +
Sbjct: 1   MRFVSWNVNGLRAALKKGFMESFKELDADAFCLQETKMQEGQAILD-LPGYEQYFYSAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI ++ +P+ +   +     D + R I   F      L +  +Y P+     + 
Sbjct: 60  KGYSGTAIFTRVKPLSVARGIGIPQHDNEGRVITMEFD----DLYLVTVYTPNSQNALAR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
             D +++W   F  F  + L  ++P++  GD N+     D  NP     +A FT E R  
Sbjct: 116 -LDYRMAWEDAFRSFLLE-LRSKKPVVVCGDLNVAHTEIDLKNPKSNRRNAGFTDEERGK 173

Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L   GF D  RA +      Y++W Y   +   N G RID+ ++S E    + +A I
Sbjct: 174 FGELLAAGFVDTFRALYPDKVGAYTWWSYLRHARETNAGWRIDYFLVSEELRGRIAAAEI 233

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
                G    SDH PV ++L
Sbjct: 234 HADVFG----SDHCPVSLTL 249


>gi|313895351|ref|ZP_07828908.1| exodeoxyribonuclease III [Selenomonas sp. oral taxon 137 str.
           F0430]
 gi|312976246|gb|EFR41704.1| exodeoxyribonuclease III [Selenomonas sp. oral taxon 137 str.
           F0430]
          Length = 250

 Score =  178 bits (451), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 72/260 (27%), Positives = 117/260 (45%), Gaps = 13/260 (5%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +        KE + D  CLQETK ++     + L     +  +  +
Sbjct: 1   MRFVSWNVNGLRAALKKGFMESFKELDADAFCLQETKMQEGQAILD-LPGYEQYFYSAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI ++ +P+ +   +     D + R I   F      L +  +Y P+     + 
Sbjct: 60  KGYSGTAIFTRVKPLSVARGIGIPQHDNEGRVITMEFD----DLYLVTVYTPNSQNALAR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
             D +++W   F  F  + L  ++P++  GD N+     D  NP     +A FT E R  
Sbjct: 116 -LDYRMAWEDAFRAFLLE-LRSKKPVVVCGDLNVAHTEIDLKNPKSNRRNAGFTDEERGK 173

Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L   GF D  RA +      Y++W Y   +   N G RID+ ++S E    + +A I
Sbjct: 174 FGELLAAGFVDTFRALYPDKVGAYTWWSYLRHARETNAGWRIDYFLVSEELRGRIAAAEI 233

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
                G    SDH PV ++L
Sbjct: 234 HADVFG----SDHCPVSLTL 249


>gi|210634817|ref|ZP_03298323.1| hypothetical protein COLSTE_02250 [Collinsella stercoris DSM 13279]
 gi|210158621|gb|EEA89592.1| hypothetical protein COLSTE_02250 [Collinsella stercoris DSM 13279]
          Length = 280

 Score =  178 bits (451), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 61/277 (22%), Positives = 110/277 (39%), Gaps = 22/277 (7%)

Query: 2   SVVTVATWNVNSIRARIHN---LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
             + +A+WNVN +RA +         + E + DI+ LQETK ++     + L   +    
Sbjct: 7   RTLKLASWNVNGLRAVLKKDPSFTDIVSELDADILGLQETKLQEGQVEID-LPGYHQVWS 65

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT-------------FTINTQT 105
              +K Y+G A+ ++ +P+ +            A   +                 +  + 
Sbjct: 66  YAERKGYSGTAVFTRDEPLSVRHADAVLAAGRAAGLTDDQLELVAVAATEGRVCALEFER 125

Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165
               ++Y P+     +                 S   E  +P++  GD+N+     D  N
Sbjct: 126 FWFVDVYTPNAQGELARLDTRMAWDDAYRAFLLSLEDETGKPVVTCGDFNVAHNEIDLKN 185

Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRID 224
           P     +A F+ E R  F +L + G+TD  RA +      YS+W Y  ++   N G RID
Sbjct: 186 PKSNRGNAGFSDEERSKFVELLDAGYTDTFRAANPDLEGAYSWWSYRFNARKNNAGWRID 245

Query: 225 HIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           + ++S      + +  I +   G    SDH PV + +
Sbjct: 246 YFLVSDSIADRVRATGIRSDIFG----SDHCPVTLEI 278


>gi|255993955|ref|ZP_05427090.1| exodeoxyribonuclease III [Eubacterium saphenum ATCC 49989]
 gi|255993623|gb|EEU03712.1| exodeoxyribonuclease III [Eubacterium saphenum ATCC 49989]
          Length = 252

 Score =  178 bits (451), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 66/261 (25%), Positives = 103/261 (39%), Gaps = 13/261 (4%)

Query: 5   TVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
              +WNVN IRA I       ++  +PD   +QETK ++     E + +  YH      K
Sbjct: 3   KFISWNVNGIRACIKKGFLDVLEGESPDYFAVQETKMQEGQ---EEILTNGYHQYWDSAK 59

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
                  L   +   + T       +        T       L          +     +
Sbjct: 60  RKGYSGTLVLSKEEAVSTSKGIGIEEHDEEGRVVTADFKDFYLV---NVYVPNSKPELAR 116

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
            D +  W   F  +  + L  E+P+I  GD N+     D  NP     +  FT E R+ F
Sbjct: 117 LDYRQHWEDDFRDYVVK-LNKEKPVIICGDLNVAHTEIDLKNPKTNRRNPGFTDEEREKF 175

Query: 184 QKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
            +L   GFTD  R  +      Y++W Y  ++   N G RID+ ++S +    +  A+I 
Sbjct: 176 TELLEAGFTDTFRYKYPDKEGAYTWWSYRFNARKNNAGWRIDYFLVSNDVKDKIEDAKIL 235

Query: 243 TKPRGWTKPSDHTPVIVSLDI 263
           +   G    SDH PV++ LDI
Sbjct: 236 SDVYG----SDHCPVVLELDI 252


>gi|294851237|ref|ZP_06791910.1| exodeoxyribonuclease III [Brucella sp. NVSL 07-0026]
 gi|294819826|gb|EFG36825.1| exodeoxyribonuclease III [Brucella sp. NVSL 07-0026]
          Length = 268

 Score =  178 bits (451), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 76/266 (28%), Positives = 123/266 (46%), Gaps = 9/266 (3%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64
           +ATWN+NS+R R+  +  ++++  PD++CLQETK  D  FP +  ++L Y HI   GQK 
Sbjct: 5   IATWNINSVRLRMPLVEQFLRDYQPDVLCLQETKCPDDLFPAKGFRALGYEHIAISGQKG 64

Query: 65  YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124
           Y+GVA +S+     +             R + A      + LRI N Y+P G      + 
Sbjct: 65  YHGVATVSRRPLDGVEK--VDFCNMGDCRHLSAVVEAGDRKLRIHNFYVPAGGDEPDPEI 122

Query: 125 DDKISWIKRF---LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180
           + K +    F   +R      +     +  GD NI P  +D ++          T  E  
Sbjct: 123 NPKFAHKLAFLEKMRAIIADRKDGCSSLLVGDLNIAPLENDVWSHKQLLKIVSHTPIETE 182

Query: 181 QSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHS 238
                    G++D +R        +Y++W Y A  W   ++G R+DH+  S +  S +  
Sbjct: 183 TLEDLRIKGGWSDLMRHLIAADQKIYTWWSYRAKDWDAADRGRRLDHVWGSADLESHIKG 242

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIP 264
            ++    RGW +PSDH PVI + D+ 
Sbjct: 243 LQVLRDARGWDRPSDHVPVIATFDLD 268


>gi|154251747|ref|YP_001412571.1| exodeoxyribonuclease III Xth [Parvibaculum lavamentivorans DS-1]
 gi|154155697|gb|ABS62914.1| exodeoxyribonuclease III Xth [Parvibaculum lavamentivorans DS-1]
          Length = 268

 Score =  178 bits (451), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 70/266 (26%), Positives = 115/266 (43%), Gaps = 6/266 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62
           + +ATWN+NS+R RI+ +   I E +PD++CLQE K  +  FP + L++  Y HI   GQ
Sbjct: 3   IKIATWNINSVRLRINLVERLIAEESPDVLCLQEIKCINDAFPLKALKAAGYEHIAVHGQ 62

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT--INTQTLRIGNLYLPHGNPIT 120
           K Y+GVA LS+    ++ +    +  D +    +      +      +          I 
Sbjct: 63  KGYHGVATLSRIPFKKVDSMNFCEKGDCRHLATDLDMPGGMRVHNFYVPAGGDEPDPEIN 122

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
                      +    +   R + +  ++  GD NI P  HD ++          T    
Sbjct: 123 PKFAHKLAFVREMTRLYDGHRTKSQNRMVLVGDLNIAPLEHDVWSHKQLLKVVSHTPVEV 182

Query: 181 QSFQKLQ--NMGFTDAIRATHDTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLLH 237
               +L   +       R   D   LYS+W Y A  W + ++G R+DHI ++P       
Sbjct: 183 ALMNELIASHDWVDVMRRFVPDNEKLYSWWSYRAKDWLAADRGRRLDHIWVTPALADTPV 242

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263
           S  +    RGW + SDH PV+ +L +
Sbjct: 243 SMTVRKDARGWERASDHAPVVATLRL 268


>gi|167771017|ref|ZP_02443070.1| hypothetical protein ANACOL_02371 [Anaerotruncus colihominis DSM
           17241]
 gi|167666687|gb|EDS10817.1| hypothetical protein ANACOL_02371 [Anaerotruncus colihominis DSM
           17241]
          Length = 250

 Score =  178 bits (451), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 65/260 (25%), Positives = 110/260 (42%), Gaps = 13/260 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      +    + D +CLQETK   +    E L        +  +
Sbjct: 1   MKLVSWNVNGLRACLGKGFLDFFSAADADAVCLQETKMHQEQADLE-LPGYQQFWNSAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G A+ ++  P+ +   +   + D + R I   +        + N Y P+     + 
Sbjct: 60  KGYSGTAVFTRVPPLNVTYGIGMAEHDSEGRVITVEYE----PFYLVNCYTPNAQRELAR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
              +     +   R     L+ ++P++  GD N+  Q  D  NP     +A F+ E R  
Sbjct: 116 L--EYRMKWEDDFRAYLMSLDAKKPVVLCGDLNVAHQEIDLKNPKTNRRNAGFSDEERAK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             +L   GF D  RA +      Y++W Y   +   N G RID+ ++S      +H +RI
Sbjct: 174 MTELLAGGFVDTFRALYPDVTGAYTWWSYLRRARDTNAGWRIDYFIVSERLRGAVHDSRI 233

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
                G    SDH PV + L
Sbjct: 234 RADVMG----SDHCPVELDL 249


>gi|23502852|ref|NP_698979.1| exodeoxyribonuclease III [Brucella suis 1330]
 gi|254700641|ref|ZP_05162469.1| exodeoxyribonuclease III [Brucella suis bv. 5 str. 513]
 gi|254708986|ref|ZP_05170797.1| exodeoxyribonuclease III [Brucella pinnipedialis B2/94]
 gi|254713585|ref|ZP_05175396.1| exodeoxyribonuclease III [Brucella ceti M644/93/1]
 gi|254716061|ref|ZP_05177872.1| exodeoxyribonuclease III [Brucella ceti M13/05/1]
 gi|256030513|ref|ZP_05444127.1| exodeoxyribonuclease III [Brucella pinnipedialis M292/94/1]
 gi|256059974|ref|ZP_05450158.1| exodeoxyribonuclease III [Brucella neotomae 5K33]
 gi|260169418|ref|ZP_05756229.1| exodeoxyribonuclease III [Brucella sp. F5/99]
 gi|261217826|ref|ZP_05932107.1| exodeoxyribonuclease III Xth [Brucella ceti M13/05/1]
 gi|261316482|ref|ZP_05955679.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis B2/94]
 gi|261321326|ref|ZP_05960523.1| exodeoxyribonuclease III Xth [Brucella ceti M644/93/1]
 gi|261323946|ref|ZP_05963143.1| exodeoxyribonuclease III Xth [Brucella neotomae 5K33]
 gi|261751147|ref|ZP_05994856.1| exodeoxyribonuclease III Xth [Brucella suis bv. 5 str. 513]
 gi|261758940|ref|ZP_06002649.1| exodeoxyribonuclease III [Brucella sp. F5/99]
 gi|265987555|ref|ZP_06100112.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis M292/94/1]
 gi|23348878|gb|AAN30894.1| exodeoxyribonuclease III [Brucella suis 1330]
 gi|260922915|gb|EEX89483.1| exodeoxyribonuclease III Xth [Brucella ceti M13/05/1]
 gi|261294016|gb|EEX97512.1| exodeoxyribonuclease III Xth [Brucella ceti M644/93/1]
 gi|261295705|gb|EEX99201.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis B2/94]
 gi|261299926|gb|EEY03423.1| exodeoxyribonuclease III Xth [Brucella neotomae 5K33]
 gi|261738924|gb|EEY26920.1| exodeoxyribonuclease III [Brucella sp. F5/99]
 gi|261740900|gb|EEY28826.1| exodeoxyribonuclease III Xth [Brucella suis bv. 5 str. 513]
 gi|264659752|gb|EEZ30013.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis M292/94/1]
          Length = 268

 Score =  178 bits (451), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 76/266 (28%), Positives = 123/266 (46%), Gaps = 9/266 (3%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64
           +ATWN+NS+R R+  +  ++++  PD++CLQETK  D  FP +  ++L Y HI   GQK 
Sbjct: 5   IATWNINSVRLRMPLVEQFLRDYQPDVLCLQETKCPDDLFPAKGFRALGYEHIAISGQKG 64

Query: 65  YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124
           Y+GVA +S+     +             R + A      + LRI N Y+P G      + 
Sbjct: 65  YHGVATVSRRPLDGVEK--VDFCNMGDCRHLSAVVEAGDRKLRIHNFYVPAGGDEPDPEI 122

Query: 125 DDKISWIKRF---LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180
           + K +    F   +R      +     +  GD NI P  +D ++          T  E  
Sbjct: 123 NPKFAHKLAFLEEMRAIIADRKDGCSSLLVGDLNIAPLENDVWSHKQLLKIVSHTPIETE 182

Query: 181 QSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHS 238
                    G++D +R        +Y++W Y A  W   ++G R+DH+  S +  S +  
Sbjct: 183 TLEDLRIKGGWSDLMRHLIAADQKIYTWWSYRAKDWDAADRGRRLDHVWGSADLESHIKG 242

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIP 264
            ++    RGW +PSDH PVI + D+ 
Sbjct: 243 LQVLRDARGWDRPSDHVPVIATFDLD 268


>gi|330994641|ref|ZP_08318564.1| Exodeoxyribonuclease III [Gluconacetobacter sp. SXCC-1]
 gi|329758282|gb|EGG74803.1| Exodeoxyribonuclease III [Gluconacetobacter sp. SXCC-1]
          Length = 302

 Score =  178 bits (451), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 76/264 (28%), Positives = 117/264 (44%), Gaps = 6/264 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62
           + + TWN+NS+R R+  LA    E  PD++CLQETK  D  FP E +++L + H+   G 
Sbjct: 39  MRIVTWNINSLRLRMPLLARLCAETAPDMVCLQETKVPDALFPLEAVRALGFGHVAYRGM 98

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K YNGVAILS+   ++++   P        R +          + + + Y+P G  I   
Sbjct: 99  KGYNGVAILSRQP-VQVLEDTPDWCARGDCRHLAVRHGSGETAIDVHDFYVPAGGDIPDP 157

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIF--AGDYNIIPQPHDCYNPIIWENDACFTL-EV 179
             + K +    F+  A               GD NI P  HD ++          T  E 
Sbjct: 158 DENPKFAHKLAFVEEARHWFSARAMRRTVLVGDLNIAPLEHDVWSHKQLLKIVSHTPAET 217

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLLHS 238
            +     Q                LY++W Y    W + ++G R+DH+ ++P+    L  
Sbjct: 218 ERLLAWQQTGFIDAMRHFVPPAEKLYTWWSYRNRDWSASDRGRRLDHVWVTPDLRDALRG 277

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
            ++    R W KPSDH PVIV +D
Sbjct: 278 MQVLRPARDWDKPSDHVPVIVDMD 301


>gi|146304199|ref|YP_001191515.1| exodeoxyribonuclease III Xth [Metallosphaera sedula DSM 5348]
 gi|145702449|gb|ABP95591.1| exodeoxyribonuclease III Xth [Metallosphaera sedula DSM 5348]
          Length = 248

 Score =  178 bits (451), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 72/263 (27%), Positives = 113/263 (42%), Gaps = 18/263 (6%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60
           + + +WNVN ++A +   L   +K+   DI+  QE K+     P +  Q L Y  ++   
Sbjct: 1   MKILSWNVNGLKAILGKGLLDLVKKQEYDILMFQEVKSS--QLPID-FQLLPYRSYLYPA 57

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+G   L++ +PI     +  ++ D + R I   F        I   +   G  + 
Sbjct: 58  KKKGYSGTLTLTRIEPISAKYGIGDEEFDSEGRVIALEFQKVY---VINVYFPNAGEELK 114

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
              +      ++   RF      L +P +  GD+N+  +  D   P    N A FT E R
Sbjct: 115 RLDF-----KLRFNQRFHEFVKNLGKPCVICGDFNVAHEEIDIARPKDNVNHAGFTPEER 169

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           + F +    GF D  R        YS+W Y   +  KN G RID+ ++S E    +  A 
Sbjct: 170 KWFHEFLASGFVDTFRIFVKEGGHYSWWSYRFHAREKNIGWRIDYCVVSKELEKHVKKAE 229

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263
           I  K  G    SDH PV + LDI
Sbjct: 230 ILEKVMG----SDHAPVTLELDI 248


>gi|119385102|ref|YP_916158.1| exodeoxyribonuclease III Xth [Paracoccus denitrificans PD1222]
 gi|119374869|gb|ABL70462.1| exodeoxyribonuclease III Xth [Paracoccus denitrificans PD1222]
          Length = 261

 Score =  178 bits (451), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 89/266 (33%), Positives = 121/266 (45%), Gaps = 10/266 (3%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCG 61
           + T+ATWN+NS+R R   +A ++ E  PDI+CLQETK+  +N P E  ++L Y H    G
Sbjct: 1   MFTIATWNINSVRLREALVARFLTEEAPDILCLQETKSPVENIPLEAFRALGYDHFVARG 60

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           QK YNGVAILSK           GD                   + I N Y+P G  I  
Sbjct: 61  QKGYNGVAILSKLPIE-----DAGDRDYAGLGHARHVAARLENGVTIHNFYVPAGGDIPD 115

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL-E 178
            + + K      FL         + P      GD NI P+  D ++          T  E
Sbjct: 116 REQNVKFGQKLDFLTEMRDVFHADRPARSIMVGDLNIAPREDDVWSHKQLLKIVSHTPIE 175

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLH 237
           V           + D  R       LYS+W Y A  W   +KG R+DHI  +P+  +  H
Sbjct: 176 VEHLGAAQDAGKWVDITRKDIPQGLLYSWWSYRARDWDAADKGRRLDHIWATPDIANAGH 235

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263
           ++RI    RGW +PSDH PV+ S D+
Sbjct: 236 NSRILRPLRGWQQPSDHVPVLASFDL 261


>gi|254718052|ref|ZP_05179863.1| exodeoxyribonuclease III [Brucella sp. 83/13]
 gi|265982999|ref|ZP_06095734.1| exodeoxyribonuclease III Xth [Brucella sp. 83/13]
 gi|306837613|ref|ZP_07470484.1| exodeoxyribonuclease III (xth) [Brucella sp. NF 2653]
 gi|264661591|gb|EEZ31852.1| exodeoxyribonuclease III Xth [Brucella sp. 83/13]
 gi|306407320|gb|EFM63528.1| exodeoxyribonuclease III (xth) [Brucella sp. NF 2653]
          Length = 268

 Score =  178 bits (451), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 75/266 (28%), Positives = 122/266 (45%), Gaps = 9/266 (3%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64
           +ATWN+NS+R R+  +  ++++  PD++CLQETK  D  FP +  ++L Y HI   GQK 
Sbjct: 5   IATWNINSVRLRMSLVEQFLRDYQPDVLCLQETKCPDDQFPAKGFRALGYEHIAISGQKG 64

Query: 65  YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124
           Y+GVA +S+     +             R + A      + LRI N Y+P G        
Sbjct: 65  YHGVATVSRRPLDGVEK--VDFCNMGDCRHLSAVVETGDRKLRIHNFYVPAGGDEPDPAI 122

Query: 125 DDKISWIKRF---LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180
           + K +    F   +R      +     +  GD NI P  +D ++          T  E  
Sbjct: 123 NPKFAHKLAFLEEMRAIIADRKDGCSSLLVGDLNIAPLENDVWSHKQLLKIVSHTPIETE 182

Query: 181 QSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHS 238
                    G++D +R        ++++W Y A  W   ++G R+DH+  S +  S +  
Sbjct: 183 TLEDLRIKGGWSDLMRHLIAADQKIFTWWSYRAKDWDAADRGRRLDHVWGSADLESHIKG 242

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIP 264
            ++    RGW +PSDH PVI + D+ 
Sbjct: 243 LQVLRDARGWDRPSDHVPVIATFDLD 268


>gi|254465319|ref|ZP_05078730.1| exodeoxyribonuclease III [Rhodobacterales bacterium Y4I]
 gi|206686227|gb|EDZ46709.1| exodeoxyribonuclease III [Rhodobacterales bacterium Y4I]
          Length = 297

 Score =  178 bits (451), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 81/272 (29%), Positives = 120/272 (44%), Gaps = 16/272 (5%)

Query: 3   VVT------VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY- 55
           ++       +ATWN+NS+R R   +   ++E  PD++CLQE K+  +  P +   +L Y 
Sbjct: 31  MMRRAMPFTLATWNINSVRLREPIVQKLLQEEGPDVLCLQECKSPVEKIPVKGFAALGYR 90

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
           H+   GQK YNGVAILS+    +      G+                   + I N Y+P 
Sbjct: 91  HMIARGQKGYNGVAILSRLPIED-----AGEQDFAALGHARHVAGRLENGVVIHNFYVPA 145

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDA 173
           G  +     ++K      +L         ++P      GD NI P+  D ++        
Sbjct: 146 GGDVPDRDVNEKFGQKLDYLTAMRDWFHADKPEKSVLVGDLNIAPREDDVWDHKKLLKVV 205

Query: 174 CFTL-EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPE 231
             T  EV       +  G+ D  R       LYS+W Y A  W   +KG R+DHI  +P+
Sbjct: 206 SHTPVEVEHLADTQEAGGWIDITRRDIPGGKLYSWWSYRARDWDAADKGRRLDHIWATPD 265

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                HS+RI    RGW KPSDH PV  + D+
Sbjct: 266 IAGAGHSSRILRDARGWEKPSDHAPVFATFDL 297


>gi|322378535|ref|ZP_08052983.1| exodeoxyribonuclease [Helicobacter suis HS1]
 gi|321149049|gb|EFX43501.1| exodeoxyribonuclease [Helicobacter suis HS1]
          Length = 306

 Score =  178 bits (451), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 69/262 (26%), Positives = 118/262 (45%), Gaps = 13/262 (4%)

Query: 2   SVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
            ++ + +WNVN +RA +      +++++  DI C+QETK + +   F   +       + 
Sbjct: 50  KLMRLVSWNVNGLRACMQKGFCDFLEQSQADIFCVQETKMQQEQASF-CFEGYEVFWNSA 108

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GV  LSK  P+++   +   + D + R I   +  N   + +       G    
Sbjct: 109 QKKGYSGVLTLSKIAPLQVSYGIGIAEHDTEGRVITCEYP-NFYLVNVYTPNAQRGLLRL 167

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             + +      +R  R   Q L  ++ ++  GD N+     D  NP     +A F+   R
Sbjct: 168 PYRLE-----WERSFRGFLQNLMQKKAVVVCGDLNVAHNEIDLTNPQSNRYNAGFSDPER 222

Query: 181 QSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
            +F++L N+G  D  R  + T    Y++W Y   + +KN G RID+ + S    S L SA
Sbjct: 223 DAFRQLLNLGLIDTFRHFYPTKAESYTWWSYINQARAKNIGWRIDYFLTSQTLNSCLQSA 282

Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261
            I     G    SDH PV + L
Sbjct: 283 YIYNHILG----SDHCPVGLDL 300


>gi|291519655|emb|CBK74876.1| exodeoxyribonuclease III [Butyrivibrio fibrisolvens 16/4]
          Length = 250

 Score =  178 bits (451), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 65/261 (24%), Positives = 113/261 (43%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +      +    + DII LQE K  +    ++     + +     +
Sbjct: 1   MKFVSWNVNGLRAVMGKGFMDFFDGIDADIIGLQEIKLSEGQLEWDK-PGYHAYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G A+ +K +PI +   +  ++ D + R I   F            Y P+       
Sbjct: 60  KGYSGTAVFTKKEPISVSYGIGIEEHDHEGRVITLEFE----DFYFITCYTPNSQNELKR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
              D     +   R   Q+L  ++ +I  GD N+  +  D  NP    ++A FT E R  
Sbjct: 116 L--DYRMTWEDDFRAYLQKLNEKKGVILCGDLNVAHEEIDIKNPKTNRHNAGFTDEERAK 173

Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             +L + GF D+ R  +     +YS+W Y   +  KN G RID+ ++S +    +  ++I
Sbjct: 174 MTELLSAGFVDSFRYFYPDQTDIYSWWSYRFKAREKNAGWRIDYFIVSEDIKDRMKDSKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            T   G    SDH P+ +  +
Sbjct: 234 HTDVMG----SDHCPIELDFE 250


>gi|148560443|ref|YP_001259818.1| exodeoxyribonuclease III [Brucella ovis ATCC 25840]
 gi|225628198|ref|ZP_03786233.1| exodeoxyribonuclease III [Brucella ceti str. Cudo]
 gi|148371700|gb|ABQ61679.1| exodeoxyribonuclease III [Brucella ovis ATCC 25840]
 gi|225617023|gb|EEH14070.1| exodeoxyribonuclease III [Brucella ceti str. Cudo]
          Length = 289

 Score =  178 bits (451), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 76/266 (28%), Positives = 123/266 (46%), Gaps = 9/266 (3%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64
           +ATWN+NS+R R+  +  ++++  PD++CLQETK  D  FP +  ++L Y HI   GQK 
Sbjct: 26  IATWNINSVRLRMPLVEQFLRDYQPDVLCLQETKCPDDLFPAKGFRALGYEHIAISGQKG 85

Query: 65  YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124
           Y+GVA +S+     +             R + A      + LRI N Y+P G      + 
Sbjct: 86  YHGVATVSRRPLDGVEK--VDFCNMGDCRHLSAVVEAGDRKLRIHNFYVPAGGDEPDPEI 143

Query: 125 DDKISWIKRF---LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180
           + K +    F   +R      +     +  GD NI P  +D ++          T  E  
Sbjct: 144 NPKFAHKLAFLEEMRAIIADRKDGCSSLLVGDLNIAPLENDVWSHKQLLKIVSHTPIETE 203

Query: 181 QSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHS 238
                    G++D +R        +Y++W Y A  W   ++G R+DH+  S +  S +  
Sbjct: 204 TLEDLRIKGGWSDLMRHLIAADQKIYTWWSYRAKDWDAADRGRRLDHVWGSADLESHIKG 263

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIP 264
            ++    RGW +PSDH PVI + D+ 
Sbjct: 264 LQVLRDARGWDRPSDHVPVIATFDLD 289


>gi|158522569|ref|YP_001530439.1| exodeoxyribonuclease III [Desulfococcus oleovorans Hxd3]
 gi|158511395|gb|ABW68362.1| exodeoxyribonuclease III [Desulfococcus oleovorans Hxd3]
          Length = 262

 Score =  178 bits (451), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 56/265 (21%), Positives = 98/265 (36%), Gaps = 9/265 (3%)

Query: 2   SVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
             + + +WNVN +RA +        K  + D++ +QETK +      +      Y     
Sbjct: 4   RKIKLVSWNVNGLRAVMGKGFLETFKNLDADVVGIQETKLQAPQVTGDMANIEGYTSYWA 63

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
              +  G + ++ +  + +     G   +                +     +      + 
Sbjct: 64  HATTKKGYSGVAAFSRMPVKNAKTGMGREEYDNEGRIVELDLGDFIFFNIYFPN--GQMG 121

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   K+ + + F  +A    +    L+  GDYN      D  NP   EN + F    R
Sbjct: 122 EDRLTYKLDFYRDFFAYADAYRKQGRSLVICGDYNTAHNEIDLKNPKANENTSGFMRIER 181

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL--LHS 238
               K+   G+ D  R  +     YS+W Y   +  +N G RID+  ++ +  S   L  
Sbjct: 182 DWLDKISADGYVDTFRHLYPDTVKYSWWTYRFKARERNVGWRIDYFFVTEDIISKGWLKD 241

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263
           A ID    G    SDH PV + L+I
Sbjct: 242 AFIDNTVYG----SDHCPVGLVLEI 262


>gi|300859239|ref|YP_003784222.1| exodeoxyribonuclease III [Corynebacterium pseudotuberculosis FRC41]
 gi|300686693|gb|ADK29615.1| exodeoxyribonuclease III [Corynebacterium pseudotuberculosis FRC41]
 gi|302206930|gb|ADL11272.1| Putative exodeoxyribonuclease III [Corynebacterium
           pseudotuberculosis C231]
 gi|302331494|gb|ADL21688.1| Putative exodeoxyribonuclease III [Corynebacterium
           pseudotuberculosis 1002]
 gi|308277184|gb|ADO27083.1| Putative exodeoxyribonuclease III [Corynebacterium
           pseudotuberculosis I19]
          Length = 255

 Score =  178 bits (451), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 77/263 (29%), Positives = 126/263 (47%), Gaps = 15/263 (5%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +  WNVNS R R+  +  +++ +N D++ +QETK +D  FP+E  Q++ Y +   G  
Sbjct: 1   MRIVNWNVNSARTRVDRMVDFLQRHNVDVLAVQETKCKDDQFPYERFQAIGYQVAHFGLN 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-----TQTLRIGNLYLPHGNP 118
            +NGVAI+S+    ++  H PG     +    E              +R+ +LY+P+G  
Sbjct: 61  QWNGVAIISRVGLEDVQKHFPGQPGFNKDPQKEQAVEARAIGALCGGVRVWSLYVPNGRE 120

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
           I    YD K+ W+      A    ++ EP +F GD+NI P+  D ++   +E     T  
Sbjct: 121 IADPHYDYKLRWLFALQLHAQ---DVTEPTVFLGDFNIAPRDQDVWDMSFFEGKTHVTEP 177

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
            RQ+         T  +         YS+WDY A  + KN+G+ ID  + + + T  + +
Sbjct: 178 ERQA----FEALTTSGLHIASPLEG-YSYWDYQAGRFLKNQGMLIDFQLATTDLT--VEN 230

Query: 239 ARIDTKPRGWTKPSDHTPVIVSL 261
           + ID   R     SDH PVIV  
Sbjct: 231 SFIDVDERSGKAASDHAPVIVDY 253


>gi|296282147|ref|ZP_06860145.1| exonuclease III [Citromicrobium bathyomarinum JL354]
          Length = 265

 Score =  178 bits (451), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 69/265 (26%), Positives = 116/265 (43%), Gaps = 4/265 (1%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCG 61
           +V+V TWN+NS+R R+  +  ++    PD++CLQE K  ++ FP +  + L Y HI   G
Sbjct: 1   MVSVTTWNINSVRLRMPLVEQFLTAQAPDVLCLQEIKCVEEQFPAKAFRDLGYDHIAIHG 60

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           QK Y+GVA +S+    E   H   D+ + +   ++ T  ++   +         G+    
Sbjct: 61  QKGYHGVATVSRLPFREFSRHDWQDNGEARHIGVQLTDPVHQGMVIENVYVPAGGDVPDR 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
                    +    R       +E+P +  GD+NI P   D ++          T    +
Sbjct: 121 EVNAKFGQKLDFLERMTRWAETVEQPTLIVGDFNIAPLESDVWSHKQLLKVVSHTPIEVE 180

Query: 182 SFQKLQNMGFTDAIRATH--DTHHLYSFWDYYADSWSKN-KGIRIDHIMLSPEATSLLHS 238
           + Q+  +      I   H       YS+W Y   +W  N KG R+DH+  SP+       
Sbjct: 181 ALQRFMDAHGWTDIGREHVPAPERYYSWWSYRNPNWQTNDKGRRLDHMWASPDLAKQATR 240

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263
             I  + R W +PSDH P+    ++
Sbjct: 241 HTILEEARNWERPSDHVPLTTEFEL 265


>gi|220922845|ref|YP_002498147.1| exodeoxyribonuclease III Xth [Methylobacterium nodulans ORS 2060]
 gi|219947452|gb|ACL57844.1| exodeoxyribonuclease III Xth [Methylobacterium nodulans ORS 2060]
          Length = 269

 Score =  178 bits (451), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 80/267 (29%), Positives = 123/267 (46%), Gaps = 7/267 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62
           +TV+TWN+NS+R RI  +  ++ E  PD++CLQETK  +  FP + LQ   Y HI   GQ
Sbjct: 3   LTVSTWNINSVRLRIDLVRRFLDEVRPDVLCLQETKCPNDRFPLKELQGFGYPHIVFAGQ 62

Query: 63  KSYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           K YNGVAILS+     + V              +          + + + Y+P G  +  
Sbjct: 63  KGYNGVAILSRLPLRSQEVMSFCERQDARHISAVLGPEAGAAAGIVLHDFYVPAGGDVPD 122

Query: 122 TKYDDKISWIKRFLRFASQR--LELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-E 178
              +DK +    F+             P I  GD N+ P  HD ++     +    T  E
Sbjct: 123 AALNDKFAHKLAFMDELRAWGGRRSTSPAILVGDLNVAPLEHDVWSHKQLLDVVSHTPVE 182

Query: 179 VRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLL 236
             +        G+ D +R        +Y++W Y +  W + +KG R+DHI ++P+    +
Sbjct: 183 TERLETLRGEAGWIDTMRHLRPEPEKIYTWWSYRSPDWAAADKGRRLDHIWVTPDLAGTV 242

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263
            S  +    R W KPSDH PV V L++
Sbjct: 243 RSVTVARHARAWEKPSDHVPVTVELEL 269


>gi|254780031|ref|YP_003058138.1| exodeoxyribonuclease III [Helicobacter pylori B38]
 gi|254001944|emb|CAX30201.1| Putative exodeoxyribonuclease [Helicobacter pylori B38]
          Length = 250

 Score =  178 bits (450), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 68/260 (26%), Positives = 116/260 (44%), Gaps = 13/260 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      +    + D+ C+QE+K + +   FE  +          +
Sbjct: 1   MKLISWNVNGLRACMTKGFMDFFNSVDADVFCIQESKMQQEQNTFE-FKGYFDFWNCAIK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+GV   +K +P+ +   +  ++ D + R I   F     +  + N+Y P+     S 
Sbjct: 60  KGYSGVVTFTKKEPLSVSYGINIEEHDKEGRVITCEFE----SFYLVNVYTPNSQQALSR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                   ++   +   + LEL++P+I  GD N+     D  NP     +A F+ E R+ 
Sbjct: 116 LSYRMSWEVE--FKKFLKALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L N GF D  R  +      Y++W Y   +  K+ G RID+ + S    + L  A I
Sbjct: 174 FNELLNAGFIDTFRYFYPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALI 233

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
                G    SDH PV + L
Sbjct: 234 YKDILG----SDHCPVGLEL 249


>gi|225159347|ref|ZP_03725644.1| DNA-(apurinic or apyrimidinic site) lyase [Opitutaceae bacterium
           TAV2]
 gi|224802053|gb|EEG20328.1| DNA-(apurinic or apyrimidinic site) lyase [Opitutaceae bacterium
           TAV2]
          Length = 259

 Score =  178 bits (450), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 65/264 (24%), Positives = 102/264 (38%), Gaps = 12/264 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPF-ETLQSLNYHIETCG 61
           + + +WNVN +RA +   L  +I  +  D ICLQETK +  +    E       H     
Sbjct: 1   MKLVSWNVNGVRAVLQKGLLDYIAASGADAICLQETKCQPGDVQHVEWPAGYTAHWNAAQ 60

Query: 62  QKSYNGVAILSKY----QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
           ++ Y+G AI ++      P      +       +        T       + N Y+P+  
Sbjct: 61  KRGYSGTAIFTRMGAGSSPALTPLAVTAGIGRDEHDTEGRVLTAEFPDFYLVNAYVPNAQ 120

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
           P  +                  + LE  +P++  GD N+  +  D   P     +  F+ 
Sbjct: 121 PELARL--PYRQRWDADFLAYLRGLETRKPVVMCGDLNVAHEEIDLARPKENVGNPGFSN 178

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
           E R  F++    GF D  R        YS+W Y A +  KN G RID+ + S      L 
Sbjct: 179 EERAGFREFLRAGFLDTFREFEKGPGHYSWWSYRAGARGKNVGWRIDYFLASASLRPRLK 238

Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261
            A I+    G    SDH P+ + L
Sbjct: 239 RAWIEPAVMG----SDHCPIGLEL 258


>gi|152990892|ref|YP_001356614.1| exodeoxyribonuclease III [Nitratiruptor sp. SB155-2]
 gi|151422753|dbj|BAF70257.1| exodeoxyribonuclease III [Nitratiruptor sp. SB155-2]
          Length = 262

 Score =  178 bits (450), Expect = 9e-43,   Method: Composition-based stats.
 Identities = 84/258 (32%), Positives = 130/258 (50%), Gaps = 8/258 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNP-DIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + +AT+NVNSI AR+  +  W+ E NP DI+CLQE K E+  FPF+  + L +     GQ
Sbjct: 1   MKIATFNVNSINARLELVKRWLSEKNPIDILCLQEIKCEENRFPFKDFEELGFQCAVFGQ 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K+YNGVAI SKY   E+         D Q RFI+A            N+Y PHG+     
Sbjct: 61  KAYNGVAICSKYGFEEVQKGFGDPFWDGQKRFIQAKINGTH----FCNVYAPHGDFDGEK 116

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
               K+ + K    + +Q    +E ++  GD N+  +  D ++  +  N   F  + R++
Sbjct: 117 HI-YKLQFFKHLKEYMTQFDLKKENIVVVGDMNVAREDIDVWDAELLRNTIGFMDDEREA 175

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F+   ++G  D  R  H     +++WDY   +  +++G+RID+I+ SP       S  +D
Sbjct: 176 FEDFLSIGLVDLFRECHPDTKQFTWWDYKNGAVWRDEGMRIDYILTSPAMKERCESIEVD 235

Query: 243 TKPRGW--TKPSDHTPVI 258
              R      PSDH PV+
Sbjct: 236 MWTRKRRSPTPSDHAPVV 253


>gi|15612480|ref|NP_224133.1| exodeoxyribonuclease III [Helicobacter pylori J99]
 gi|4156036|gb|AAD06994.1| EXODEOXYRIBONUCLEASE [Helicobacter pylori J99]
          Length = 250

 Score =  178 bits (450), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 67/260 (25%), Positives = 115/260 (44%), Gaps = 13/260 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      +    + D+ C+QE+K + +   FE  +          +
Sbjct: 1   MKLISWNVNGLRACMTKGFMDFFNSVDADVFCIQESKMQQEQNTFE-FKGYFDFWNCAIK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+GV   +K +P+ +   +   + D + R +   F     +  + N+Y P+     S 
Sbjct: 60  KGYSGVVTFTKKEPLSVSYGIDIKEHDKEGRVVTCEFE----SFYLVNVYTPNSQQALSR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                   ++   +   + LEL++P+I  GD N+     D  NP     +A F+ E R+ 
Sbjct: 116 LSYRMSWEVE--FKKFLKALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L N GF D  R  +      Y++W Y   +  K+ G RID+ + S    + L  A I
Sbjct: 174 FSELLNAGFIDTFRYFYPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALI 233

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
                G    SDH PV + L
Sbjct: 234 YKDILG----SDHCPVGLEL 249


>gi|257789897|ref|YP_003180503.1| exodeoxyribonuclease III Xth [Eggerthella lenta DSM 2243]
 gi|317489355|ref|ZP_07947868.1| exodeoxyribonuclease III [Eggerthella sp. 1_3_56FAA]
 gi|325832619|ref|ZP_08165417.1| exodeoxyribonuclease III [Eggerthella sp. HGA1]
 gi|257473794|gb|ACV54114.1| exodeoxyribonuclease III Xth [Eggerthella lenta DSM 2243]
 gi|316911526|gb|EFV33122.1| exodeoxyribonuclease III [Eggerthella sp. 1_3_56FAA]
 gi|325485940|gb|EGC88400.1| exodeoxyribonuclease III [Eggerthella sp. HGA1]
          Length = 285

 Score =  178 bits (450), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 59/289 (20%), Positives = 93/289 (32%), Gaps = 33/289 (11%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +       + E + DI+ LQETK ++     +  Q   Y      +
Sbjct: 1   MRFVSWNVNGLRAVLKKGFEDIVCELDADIVALQETKLQEGQATLDLPQYREYWSYAEKK 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
                     +     +                          +   N            
Sbjct: 61  GYSGTAIFCKEQPLQALHGLGFPHLDTEGRIVALEFPKFWFVDVYTPNAQNELARIDHRM 120

Query: 123 KYDDKISWIK---------------------------RFLRFASQRLELEEPLIFAGDYN 155
           ++DD                                              +P++  GD+N
Sbjct: 121 EWDDAFRDFCKGLEEGVLPAGVPVERPALGEGHVAISELPLTQPGETADPKPVVMCGDFN 180

Query: 156 IIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADS 214
           +  Q  D  NP      A F+ E R  F  L  +GF D+ R  H      YS+W Y   +
Sbjct: 181 VAHQEIDLKNPGPNRGKAGFSDEERGKFTDLLEVGFVDSFRHLHPDVTGAYSWWSYRFKA 240

Query: 215 WSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              N G RID+ ++S E    + SA I  +  G    SDH PV + L++
Sbjct: 241 RQTNAGWRIDYFLVSDELAPKIQSACIYDEVYG----SDHCPVGIELEL 285


>gi|308185296|ref|YP_003929429.1| exodeoxyribonuclease III [Helicobacter pylori SJM180]
 gi|308061216|gb|ADO03112.1| exodeoxyribonuclease III [Helicobacter pylori SJM180]
          Length = 250

 Score =  178 bits (450), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 67/260 (25%), Positives = 116/260 (44%), Gaps = 13/260 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      +    + D+ C+QE+K + +   FE  +          +
Sbjct: 1   MKLISWNVNGLRACMTKGFMDFFNSVDADVFCIQESKMQQEQNTFE-FKGYFDFWNCAIK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+GV   +K +P+ +   +  ++ D + R +   F     +  + N+Y P+     S 
Sbjct: 60  KGYSGVVTFTKKEPLSVSYGIDIEEHDKEGRVVTCEFE----SFYLVNVYTPNSQQALSR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                   ++   +   + LEL++P+I  GD N+     D  NP     +A F+ E R+ 
Sbjct: 116 LSYRMSWEVE--FKKFLKALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L N GF D  R  +      Y++W Y   +  K+ G RID+ + S    + L  A I
Sbjct: 174 FSELLNAGFIDTFRYFYPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALI 233

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
                G    SDH PV + L
Sbjct: 234 YKDILG----SDHCPVGLEL 249


>gi|161619921|ref|YP_001593808.1| exodeoxyribonuclease III (xth) [Brucella canis ATCC 23365]
 gi|254705010|ref|ZP_05166838.1| exodeoxyribonuclease III [Brucella suis bv. 3 str. 686]
 gi|260567518|ref|ZP_05837988.1| exodeoxyribonuclease III [Brucella suis bv. 4 str. 40]
 gi|261755709|ref|ZP_05999418.1| exodeoxyribonuclease III Xth [Brucella suis bv. 3 str. 686]
 gi|161336732|gb|ABX63037.1| exodeoxyribonuclease III (xth) [Brucella canis ATCC 23365]
 gi|260157036|gb|EEW92116.1| exodeoxyribonuclease III [Brucella suis bv. 4 str. 40]
 gi|261745462|gb|EEY33388.1| exodeoxyribonuclease III Xth [Brucella suis bv. 3 str. 686]
          Length = 268

 Score =  178 bits (450), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 76/266 (28%), Positives = 123/266 (46%), Gaps = 9/266 (3%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64
           +ATWN+NS+R R+  +  ++++  PD++CLQETK  D  FP +  ++L Y HI   GQK 
Sbjct: 5   IATWNINSVRLRMPLVEQFLRDYQPDVLCLQETKCPDDLFPAKGFRALGYEHIAISGQKG 64

Query: 65  YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124
           Y+GVA +S+     +             R + A      + LRI N Y+P G      + 
Sbjct: 65  YHGVATVSRRPLDGVEK--VDFCNMGDCRHLSAVVEAGDRKLRIHNFYVPAGGDEPDPEI 122

Query: 125 DDKISWIKRF---LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180
           + K +    F   +R      +     +  GD NI P  +D ++          T  E  
Sbjct: 123 NPKFAHKLAFLEEMRAIIADRKDGCSSLLIGDLNIAPLENDVWSHKQLLKIVSHTPIETE 182

Query: 181 QSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHS 238
                    G++D +R        +Y++W Y A  W   ++G R+DH+  S +  S +  
Sbjct: 183 TLEDLRIKGGWSDLMRHLIAADQKIYTWWSYRAKDWDAADRGRRLDHVWGSADLESHIKG 242

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIP 264
            ++    RGW +PSDH PVI + D+ 
Sbjct: 243 LQVLRDARGWDRPSDHVPVIATFDLD 268


>gi|331006177|ref|ZP_08329501.1| Exodeoxyribonuclease III [gamma proteobacterium IMCC1989]
 gi|330420008|gb|EGG94350.1| Exodeoxyribonuclease III [gamma proteobacterium IMCC1989]
          Length = 271

 Score =  178 bits (450), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 64/275 (23%), Positives = 103/275 (37%), Gaps = 19/275 (6%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC-- 60
           + V + NVN IRA     +  W+K+ + D+ICLQE K +             Y+      
Sbjct: 1   MKVISINVNGIRAAARKGMFGWLKKVDADVICLQELKAQPDQIEDSLYHPEGYYSYFHSA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTH-LPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            +K Y+GV I  K +P  I       DD D +    E  +                    
Sbjct: 61  EKKGYSGVGIYCKEKPKAIHMGLGAIDDADWEDVDREGRYIQVDFKDVSVVSLYMPSGSA 120

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              + + K   +++F          +   I  GD+NI  +  D  N    + ++ F  E 
Sbjct: 121 KEERQEFKYVMMEKFEAVLRSMQRKKREFIICGDWNIAHKKVDIKNWRGNQKNSGFLPEE 180

Query: 180 RQSFQK---------LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230
           R                N+ F DA R  +   H Y++W     +W+ N G RID+ ++S 
Sbjct: 181 RSWMDWLLNEEDSLRNDNLQFVDAFRIINQEEHQYTWWSNRGQAWANNTGWRIDYHIVSK 240

Query: 231 EATSLLHSAR--IDTKPRGWTKPSDHTPVIVSLDI 263
                + +    I  + R     SDH P+ +  DI
Sbjct: 241 GLRDKVVAGSDLIYKEER----FSDHAPLAIEYDI 271


>gi|288931161|ref|YP_003435221.1| exodeoxyribonuclease III [Ferroglobus placidus DSM 10642]
 gi|288893409|gb|ADC64946.1| exodeoxyribonuclease III [Ferroglobus placidus DSM 10642]
          Length = 253

 Score =  178 bits (450), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 80/261 (30%), Positives = 133/261 (50%), Gaps = 11/261 (4%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           ++ V T+NVNSIR R+H +   +     DI+C+QETK ED+ FP        YH+   G 
Sbjct: 1   MLKVCTYNVNSIRKRLHIVFPLM--EKVDILCMQETKVEDRKFPEADFHLKGYHVVFSGG 58

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K+ NGVAI SK++P E  + + G+                   L + N+Y P G  I S 
Sbjct: 59  KARNGVAIASKFEPDEYFSGINGEKD--------RVIAARFGKLWVINVYAPQGQSIESE 110

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
            Y  K+ + K+   F S+ ++ +   +  GD N+ P+  D ++P    N  CF  +V+++
Sbjct: 111 YYRYKLEFFKKLKEFLSEFVDFKGYYLLCGDMNVAPEDIDVHSPDKLRNHVCFHEDVKKA 170

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYY-ADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F+++  +GF D +R  H    +Y+F+DY   D+  +  G R+DHI+ + +         +
Sbjct: 171 FKEIVQLGFVDVLRKHHPKERIYTFYDYRVRDAVKRGLGWRVDHILATEKLAEKSKDCYV 230

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
             + R   KPSDH P++   +
Sbjct: 231 LLEYRTTEKPSDHVPLVAEFE 251


>gi|114765837|ref|ZP_01444930.1| exodeoxyribonuclease III, putative [Pelagibaca bermudensis
           HTCC2601]
 gi|114541836|gb|EAU44873.1| exodeoxyribonuclease III, putative [Roseovarius sp. HTCC2601]
          Length = 262

 Score =  178 bits (450), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 84/264 (31%), Positives = 120/264 (45%), Gaps = 10/264 (3%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQK 63
           T+ATWN+NS+R R   +   + E  PD++CLQE K+  +  P E  ++L Y H+   GQK
Sbjct: 4   TLATWNINSVRLREALVCKLLTEEAPDVLCLQECKSPVEKIPMEAFRALGYGHVVARGQK 63

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            YNGVAILSK           GD                   + + N Y+P G  +   +
Sbjct: 64  GYNGVAILSKLPM-----RDMGDHDFAGLGHARHVAAELENGVTVQNFYVPAGGDVPDRE 118

Query: 124 YDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180
            ++K      +L         E P      GD NI P+  D ++          T  EV 
Sbjct: 119 VNEKFGQKLDYLAEMRDWFRAEAPKKSILVGDLNIAPREDDVWSHKQLLKVVSHTPVEVE 178

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHSA 239
              +  +  G+ D  R       LYS+W Y A  W   +KG R+DH+  +P+  S  HS+
Sbjct: 179 ALAETQEAGGWVDITRKDIPEGQLYSWWSYRARDWDAADKGRRLDHVWATPDIASAGHSS 238

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
           R+    RGW KPSDH PV  + D+
Sbjct: 239 RVLRDARGWEKPSDHAPVFATFDL 262


>gi|302552034|ref|ZP_07304376.1| exodeoxyribonuclease III [Streptomyces viridochromogenes DSM 40736]
 gi|302469652|gb|EFL32745.1| exodeoxyribonuclease III [Streptomyces viridochromogenes DSM 40736]
          Length = 274

 Score =  178 bits (450), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 56/268 (20%), Positives = 102/268 (38%), Gaps = 8/268 (2%)

Query: 2   SVVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
            V+TV + NVN +RA        W+ +   D++CLQE + E +  P        +H+   
Sbjct: 7   RVLTVTSVNVNGLRAAAKKGFVEWLGQTEADVLCLQEVRAEPEQLPEHVRTPEGWHVTHA 66

Query: 61  GQ--KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
               K   GV++ ++ +P  +      ++ D   R++EA     T    +       G  
Sbjct: 67  PAAAKGRAGVSLYTRREPDRVQVGFGSEEFDGSGRYVEADLPGVTVA-SLYLPSGEVGTE 125

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
               K      ++        +       ++  GD+NI  Q  D  N    + ++ F  E
Sbjct: 126 RQDEKERFMGEFLAHLKGLRERAAAEGREVLVCGDWNIAHQKADLKNWRGNQKNSGFLPE 185

Query: 179 VRQSFQKLQN----MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
            R+   ++ +               DT   YS+W Y   ++  + G RID  + +P   +
Sbjct: 186 EREWLGRVLDPADGGYVDVVRALHPDTEGPYSWWSYRGRAFDNDSGWRIDLAVATPRLAA 245

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
               A ++       + SDH PV V  +
Sbjct: 246 RAVKAVVERAASHEERWSDHAPVTVVFE 273


>gi|258645453|ref|ZP_05732922.1| exodeoxyribonuclease III [Dialister invisus DSM 15470]
 gi|260402804|gb|EEW96351.1| exodeoxyribonuclease III [Dialister invisus DSM 15470]
          Length = 254

 Score =  178 bits (450), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 72/265 (27%), Positives = 121/265 (45%), Gaps = 13/265 (4%)

Query: 1   MSVVTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           M  +   +WNVN +RA +        KE + D  CLQETK +      + L     +  +
Sbjct: 1   MKSLKYISWNVNGLRACMKKGFMQSFKELDADCFCLQETKLQPDQIELD-LPGYYQYWNS 59

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G A+ +K +P+ +   +  ++ D + R I A F  +              +  
Sbjct: 60  AVKKGYSGTALFTKIKPLSVTYGIGMEEHDQEGRVITADFNDH-----CLVTCYTPNSQR 114

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +   ++ W   F ++    L  ++P+I  GD N+  +  D  NP     +A FT + 
Sbjct: 115 GLARLTYRMKWEDDFKKYLLD-LSKKKPVILCGDLNVAHEEIDLANPASNHMNAGFTDDE 173

Query: 180 RQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R    +L + GFTD+ R  H D    YS+W Y+A S  +N G RID+ ++S      + +
Sbjct: 174 RNKMTELLSDGFTDSFRYLHQDKKDAYSWWSYFAKSRERNIGWRIDYFLVSDILQPRIKA 233

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263
           A I +   G    SDH PV + ++I
Sbjct: 234 AEIHSSILG----SDHCPVELDIEI 254


>gi|294085378|ref|YP_003552138.1| exodeoxyribonuclease III Xth [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292664953|gb|ADE40054.1| exodeoxyribonuclease III Xth [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 259

 Score =  178 bits (450), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 71/262 (27%), Positives = 114/262 (43%), Gaps = 7/262 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62
           + +ATWN+NS+R R   +  ++ E++ D++CLQETKTEDK+FP +      + H    G+
Sbjct: 1   MKIATWNINSVRLRRDLVKQFLDESDVDVLCLQETKTEDKSFPVDFFAEAGWGHQAIRGE 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           KSYNGVAILS+    +I         D +         +      +        +P  + 
Sbjct: 61  KSYNGVAILSRTPLADIAHINWAGKQDCRHISARTESGVTIHNFYVPAG-GDVADPDENP 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ- 181
           K+  K++++        +        +  GD NI P   D ++          T      
Sbjct: 120 KFAHKLTFLAEMTAHFVKNRPEN--AVLVGDLNIAPLAEDVWSTKQLLKVVSHTPVETDG 177

Query: 182 -SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHSA 239
                 +            D   +YS+W Y +  W   N+G R+DHI +S +  + +  A
Sbjct: 178 LKALMAKGSWHDPVRAHFGDDEQIYSWWSYRSRDWQVNNRGRRLDHIWVSTDLANAVSKA 237

Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261
            I T  R   KPSDH P I++L
Sbjct: 238 EILTDYRNAEKPSDHVPTIITL 259


>gi|256158498|ref|ZP_05456396.1| exodeoxyribonuclease III [Brucella ceti M490/95/1]
 gi|256253917|ref|ZP_05459453.1| exodeoxyribonuclease III [Brucella ceti B1/94]
 gi|261221054|ref|ZP_05935335.1| exodeoxyribonuclease III Xth [Brucella ceti B1/94]
 gi|265997015|ref|ZP_06109572.1| exodeoxyribonuclease III Xth [Brucella ceti M490/95/1]
 gi|260919638|gb|EEX86291.1| exodeoxyribonuclease III Xth [Brucella ceti B1/94]
 gi|262551483|gb|EEZ07473.1| exodeoxyribonuclease III Xth [Brucella ceti M490/95/1]
          Length = 268

 Score =  178 bits (450), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 76/266 (28%), Positives = 123/266 (46%), Gaps = 9/266 (3%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64
           +ATWN+NS+R R+  +  ++++  PD++CLQETK  D  FP +  ++L Y HI   GQK 
Sbjct: 5   IATWNINSVRLRMPLVEQFLRDYQPDVLCLQETKCPDDLFPAKGFRALGYEHIAISGQKG 64

Query: 65  YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124
           Y+GVA +S+     +             R + A      + LRI N Y+P G      + 
Sbjct: 65  YHGVATVSRRPLDGVEK--VDFCNMDDCRHLSAVVEAGDRKLRIHNFYVPAGGDEPDPEI 122

Query: 125 DDKISWIKRF---LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180
           + K +    F   +R      +     +  GD NI P  +D ++          T  E  
Sbjct: 123 NPKFAHKLAFLEEMRAIIADRKDGCSSLLVGDLNIAPLENDVWSHKQLLKIVSHTPIETE 182

Query: 181 QSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHS 238
                    G++D +R        +Y++W Y A  W   ++G R+DH+  S +  S +  
Sbjct: 183 TLEDLRIKGGWSDLMRHLIAADQKIYTWWSYRAKDWDAADRGRRLDHVWGSADLESHIKG 242

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIP 264
            ++    RGW +PSDH PVI + D+ 
Sbjct: 243 LQVLRDARGWDRPSDHVPVIATFDLD 268


>gi|296113240|ref|YP_003627178.1| exodeoxyribonuclease III [Moraxella catarrhalis RH4]
 gi|295920934|gb|ADG61285.1| exodeoxyribonuclease III [Moraxella catarrhalis RH4]
 gi|326560231|gb|EGE10619.1| exonuclease III [Moraxella catarrhalis 7169]
 gi|326562876|gb|EGE13163.1| exonuclease III [Moraxella catarrhalis 46P47B1]
 gi|326563683|gb|EGE13935.1| exonuclease III [Moraxella catarrhalis 103P14B1]
 gi|326565237|gb|EGE15422.1| exonuclease III [Moraxella catarrhalis 12P80B1]
 gi|326566451|gb|EGE16601.1| exonuclease III [Moraxella catarrhalis BC1]
 gi|326570258|gb|EGE20303.1| exonuclease III [Moraxella catarrhalis BC8]
 gi|326570995|gb|EGE21019.1| exonuclease III [Moraxella catarrhalis BC7]
 gi|326573291|gb|EGE23259.1| exonuclease III [Moraxella catarrhalis 101P30B1]
 gi|326575810|gb|EGE25733.1| exonuclease III [Moraxella catarrhalis CO72]
 gi|326576891|gb|EGE26797.1| exonuclease III [Moraxella catarrhalis O35E]
          Length = 271

 Score =  178 bits (450), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 84/271 (30%), Positives = 125/271 (46%), Gaps = 10/271 (3%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + T  ++N+N +RAR H L A       DII LQETK  D  FP   +Q L YH+E  GQ
Sbjct: 1   MTTFVSFNINGLRARPHQLEAIRDILGADIIGLQETKVHDALFPVNMVQDLGYHVEFFGQ 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121
           KS+ GVA+ SK  P  +    P    D Q R I A +  + +++ + N Y P G   +  
Sbjct: 61  KSHYGVALASKIAPTFVQKGFPFGHDDAQRRLIHARYDFDGRSIDVLNGYFPQGENRSHE 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175
            K+  K  +     R+  +       LI  GD NI P+  D           + +    F
Sbjct: 121 IKFPMKREFYADLNRYIDELQADGRELIIMGDMNISPEDIDVGIGAANAKRWLAKGTCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA 232
             E R  +Q L + G TD  R  +   H  +S++DY +  +     +G+RIDHI+ +   
Sbjct: 181 LPEERAWYQMLMSTGLTDTYRLFYPKSHDEFSWFDYRSRGFEDTPKRGLRIDHILCTDTL 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            +   +A I    R   KPSDH P+    ++
Sbjct: 241 KNDCVAAGISYDIRAMDKPSDHAPIWAKFNL 271


>gi|78049571|ref|YP_365746.1| exodeoxyribonuclease III [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|78038001|emb|CAJ25746.1| exodeoxyribonuclease III [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 266

 Score =  178 bits (450), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 66/273 (24%), Positives = 112/273 (41%), Gaps = 24/273 (8%)

Query: 4   VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + ++N N +R A      AW    + D++C+QETK ++            Y       
Sbjct: 1   MRIISFNANGLRSAASKGFFAWFAAQDADVLCVQETKAQEHQLAGPDFLPTGYKAWFRDA 60

Query: 62  --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G+AI S+++P E+ T L   + D + R+IEA F      L + + Y+P G+  
Sbjct: 61  STKKGYSGMAIYSRHEPDEVRTALGWPEFDEEGRYIEARFG----NLSVVSFYIPSGS-S 115

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              + D K   ++       Q L      +  GD+NI+    D  N    + ++      
Sbjct: 116 GELRQDYKFQVMQWLRPILEQWLASGRQYVLCGDWNIVRTALDIKNWKSNQKNSGCLPPE 175

Query: 180 RQSFQKLQN-----------MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
           R     L              G+ D+ R  H     Y++W     + + N G RID+ ++
Sbjct: 176 RDWLNGLCADAPEDANPAEGRGWVDSYRVLHPQGQDYTWWSNRGAARANNVGWRIDYQLV 235

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           +P     L +  I  + R     SDH P IV  
Sbjct: 236 TPGLRDTLKACSIYREER----FSDHAPYIVDY 264


>gi|311109328|ref|YP_003982181.1| exodeoxyribonuclease III 2 [Achromobacter xylosoxidans A8]
 gi|310764017|gb|ADP19466.1| exodeoxyribonuclease III 2 [Achromobacter xylosoxidans A8]
          Length = 262

 Score =  178 bits (450), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 61/264 (23%), Positives = 105/264 (39%), Gaps = 9/264 (3%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59
           ++ + + N+N IR+     L  W++++  D++CLQE K   ++   +      Y  H   
Sbjct: 1   MLRITSINLNGIRSAFRKGLQPWMEKHAADVLCLQEIKVSHEDLTDDLRHPPGYTGHFHH 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GV I  +     + T L  ++ D + R I A +  N   +         G+  
Sbjct: 61  AVKKGYSGVGIYLRDAAERVNTGLDCEEFDPEGRIIRADWK-NLSVISAYLPSGSSGDER 119

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              KY     +         +        I  GD+NI  +  D  N      ++ F  E 
Sbjct: 120 QQAKYRFLDRFGPWIDALMHEHKTTGREFIICGDWNIAHKEIDLKNWKGNLKNSGFLPEE 179

Query: 180 RQSFQKLQN-MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R     + +  GF D  R   D    Y++W     +W+KN G RID+ + +P   +   +
Sbjct: 180 RAWLTDVFDKRGFVDVFRTIDDRPDQYTWWSNRGQAWAKNVGWRIDYQIATPGIAARARN 239

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
             I    R     SDH P+ +  D
Sbjct: 240 VAIYKDER----FSDHAPLTIDYD 259


>gi|114330706|ref|YP_746928.1| exodeoxyribonuclease III Xth [Nitrosomonas eutropha C91]
 gi|114307720|gb|ABI58963.1| exodeoxyribonuclease III Xth [Nitrosomonas eutropha C91]
          Length = 257

 Score =  178 bits (450), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 64/263 (24%), Positives = 112/263 (42%), Gaps = 13/263 (4%)

Query: 4   VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60
           + + T N+N +R A    L  W+ +   D+IC+QE K +  +          Y  +    
Sbjct: 1   MRIITLNLNGLRSAASKGLFDWLPQQEADVICVQELKAQQNDINGVMRTPDGYSGYFHCA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GV I +++ P +IV      ++D + RF+   F      L + ++YLP G+   
Sbjct: 61  VKKGYSGVGIYTRHAPDQIVEGTGIAEIDAEGRFLRVDFG----NLTVISIYLPSGS-SG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   K  +++ F        E    ++  GD+NI  +  D  N    + ++ F  E R
Sbjct: 116 EHRQAAKFFFMEHFFPLLQSLAEGGREVLLCGDWNIAHKEIDLKNWRSNQKNSGFLPEER 175

Query: 181 QS-FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
                    +   D  R  +     Y++W     +W+KN G RID+ + +P   S    A
Sbjct: 176 AWLSTVFDELKLVDVFRTINPEPDQYTWWSNRGQAWAKNVGWRIDYQIATPGLASTATGA 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
            I    R     SDH P+++  D
Sbjct: 236 SIYKTER----FSDHAPLLIDYD 254


>gi|16127936|ref|NP_422500.1| exodeoxyribonuclease III [Caulobacter crescentus CB15]
 gi|221236757|ref|YP_002519194.1| exodeoxyribonuclease III [Caulobacter crescentus NA1000]
 gi|13425472|gb|AAK25668.1| exodeoxyribonuclease III [Caulobacter crescentus CB15]
 gi|220965930|gb|ACL97286.1| exodeoxyribonuclease III [Caulobacter crescentus NA1000]
          Length = 268

 Score =  178 bits (450), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 75/272 (27%), Positives = 122/272 (44%), Gaps = 18/272 (6%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62
           + +ATWNVNS+R R    A ++ E  PD++C+QE K ++  FP E  +++   H++  GQ
Sbjct: 3   LRIATWNVNSVRLRAEQAARFVDEQAPDVLCMQEIKCQEGEFPREAFEAMGLPHLKIAGQ 62

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K ++GVAI S+    ++ T +   +   +         +    + I N Y+P G      
Sbjct: 63  KGWHGVAIASRLPIEDVPTLMTCREGHARCVA------VKVAGVEIQNFYIPAGGDTPDR 116

Query: 123 KYDDKISWIKRFLRFASQRLELEEPL---IFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
             + K      F    +  L+  +P    I  GD NI P  +D ++          T   
Sbjct: 117 IGNPKFDHKLDFYETLTAALKKRDPKAPLIVTGDLNIAPGENDVWSHRQMLKVVSHTPPE 176

Query: 180 RQSFQ--KLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLL 236
            ++F               AT +   L+S+W Y A  + K N+G+R+DHI+ SP      
Sbjct: 177 LEAFDALIKSMDLLDLPRLATPEPQKLFSWWSYRAADFRKSNRGLRLDHILASPGLRDAA 236

Query: 237 -----HSARIDTKPRGWTKPSDHTPVIVSLDI 263
                 S+R+    R W +PSDH PV   L +
Sbjct: 237 SLDGKVSSRVHDDVREWERPSDHAPVTADLKV 268


>gi|257437815|ref|ZP_05613570.1| exodeoxyribonuclease III [Faecalibacterium prausnitzii A2-165]
 gi|257199738|gb|EEU98022.1| exodeoxyribonuclease III [Faecalibacterium prausnitzii A2-165]
          Length = 263

 Score =  178 bits (450), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 68/263 (25%), Positives = 114/263 (43%), Gaps = 16/263 (6%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60
           + + +WNVN +RA + H+ AA     + DI  +QETK +             Y  +  + 
Sbjct: 14  MKLISWNVNGLRACLTHDFAASFAALDADIFSVQETKMQPGQ---ADFAPEGYTEYTYSA 70

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+G A   K  P+ + T +  ++ D + R +   +                 +   
Sbjct: 71  EKKGYSGTACWCKTAPLAVTTGIGREEHDHEGRVLTLEYPGFYL-----VNCYTPNSQDG 125

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             + D +++W   F  +  + L+ ++P+I  GD N+     D  N       A FT + R
Sbjct: 126 LKRLDYRMTWEDAFRAYLLE-LDAKKPVILCGDLNVAHTEIDIKNAKTNRMSAGFTDQER 184

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
               +L   GFTD  RA H     YS+W Y   +  KN G RID+ ++S      + +A 
Sbjct: 185 AKMTELLAAGFTDTFRAVHPDEVKYSWWSYRFHAREKNAGWRIDYFIVSNRIADKVTAAE 244

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263
           I  +  G    SDH PV + +D+
Sbjct: 245 IHNEVFG----SDHCPVELVIDL 263


>gi|254511339|ref|ZP_05123406.1| exodeoxyribonuclease III [Rhodobacteraceae bacterium KLH11]
 gi|221535050|gb|EEE38038.1| exodeoxyribonuclease III [Rhodobacteraceae bacterium KLH11]
          Length = 262

 Score =  178 bits (450), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 83/264 (31%), Positives = 121/264 (45%), Gaps = 10/264 (3%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQK 63
           T+ATWN+NS+R R   +   ++E  PD++CLQE K+  +  P E    L Y H+   GQK
Sbjct: 4   TLATWNINSVRLREPIVLKLLQEEAPDVLCLQECKSPVEKIPTEGFAELGYTHMIARGQK 63

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            YNGVAILS+    E+           +              + I N Y+P G  +   +
Sbjct: 64  GYNGVAILSRLPMEEVGDKDFAGLGHARHIAGRLENG-----VTIHNFYVPAGGDVPDRE 118

Query: 124 YDDKISWIKRFLRFASQRLELEEP--LIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180
            ++K      +L         E+P   I  GD NI P+  D ++          T  EV 
Sbjct: 119 VNEKFGQKLDYLTDMRDWFHAEKPGKSILVGDLNIAPREDDVWSHKQLLKVVSHTPIEVE 178

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHSA 239
              +     G+ D  R       LYS+W Y A  W   +KG R+DH+  + + ++  HS+
Sbjct: 179 HLAETQDAGGWVDITRQDIPEGQLYSWWSYRARDWDAADKGRRLDHVWATSDISNAGHSS 238

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
           RI    RGW KPSDH PV  + D+
Sbjct: 239 RILRDARGWEKPSDHAPVFATFDV 262


>gi|153008297|ref|YP_001369512.1| exodeoxyribonuclease III Xth [Ochrobactrum anthropi ATCC 49188]
 gi|151560185|gb|ABS13683.1| exodeoxyribonuclease III Xth [Ochrobactrum anthropi ATCC 49188]
          Length = 268

 Score =  178 bits (450), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 77/266 (28%), Positives = 122/266 (45%), Gaps = 9/266 (3%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64
           VATWN+NS+R R+  +  ++++  PD++CLQETK  D  FP +  ++L Y HI   GQK 
Sbjct: 5   VATWNINSVRLRMPLVEQFLRDYQPDVLCLQETKCPDNLFPSKGFRALGYEHIAISGQKG 64

Query: 65  YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124
           Y+GVA +S+     +     G       R + A      + LRI N Y+P G        
Sbjct: 65  YHGVATISRRHLTGVEK--IGFCDMGDCRHLSAVVEAGGKKLRIHNFYVPAGGDEPDPVI 122

Query: 125 DDKISWIKRF---LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180
           + K +    F   +R      +     +  GD NI P  +D ++          T  E  
Sbjct: 123 NPKFAHKLAFLEEMRAIVADRKDGHSSVLVGDLNIAPLENDVWSHKQLLKIVSHTPIETE 182

Query: 181 QSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLLHS 238
                    G++D +R        ++++W Y A  W   ++G R+DH+  S +    +  
Sbjct: 183 TLEDLRVKGGWSDLMRQLIPADQKIFTWWSYRAKDWAESDRGRRLDHVWGSADLEGYMQG 242

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIP 264
            +I    RGW +PSDH PVI + D+ 
Sbjct: 243 LQILRDARGWDRPSDHVPVIATFDLD 268


>gi|225848729|ref|YP_002728893.1| exodeoxyribonuclease III [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225643820|gb|ACN98870.1| exodeoxyribonuclease III [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 264

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 89/265 (33%), Positives = 141/265 (53%), Gaps = 10/265 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIK--ENNPDIICLQETKTEDKNFPFETLQSLNY-HIETC 60
           + + T+N+NSI+AR   +  W+K    + D++C QE K E+KNFPF+  +S+ + + E  
Sbjct: 1   MKICTFNLNSIKARKDLVLQWLKHRNYDIDVLCFQEIKVEEKNFPFDEFRSVGFIYQEVL 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           GQK+YNGVA LSK+    ++  L  D  D Q R +          + I N Y PHG+   
Sbjct: 61  GQKAYNGVATLSKFPMDRVLDGLNHDYFDNQKRVLITKI----NDVYIINTYAPHGDLRG 116

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFA-GDYNIIPQPHDCYNPIIWENDACFTLEV 179
             KY  K+ W K F+ F  +  ++    +   GD NI  +  D Y+PI+ ++      E 
Sbjct: 117 GEKYYYKLDWYKHFISFLKENFDVNNQKVILLGDLNIALEDKDVYDPILLKDSIGTMPEE 176

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R+  + L ++GF D+ R  +     +++WDY   +  KN+G+RID+I++S      L   
Sbjct: 177 RELLRNLLDLGFIDSFRFLYPDKIQFTWWDYIGGAIWKNEGMRIDYILISKPLVKYLKDV 236

Query: 240 RIDTKPRGW--TKPSDHTPVIVSLD 262
            +D  PR     KPSDH PVI + +
Sbjct: 237 EVDLWPRRRRDPKPSDHAPVIATFE 261


>gi|317182729|dbj|BAJ60513.1| exodeoxyribonuclease [Helicobacter pylori F57]
          Length = 250

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 69/260 (26%), Positives = 115/260 (44%), Gaps = 13/260 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      +    + D+ C+QE+K + +   FE  +          +
Sbjct: 1   MKLISWNVNGLRACMTKGFMDFFNSVDADVFCIQESKMQQEQNTFE-FKGYFDFWNCAIK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+GV   +K +P+ +   +  ++ D + R +   F     +  + N+Y P+     S 
Sbjct: 60  KGYSGVVTFTKKEPLSVSYGINMEEHDKEGRVVTCEFE----SFYLVNVYTPNSQQALSR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                   ++   R   + LEL++P+I  GD N+     D  NP     +A F+ E R  
Sbjct: 116 LSYRMSWEVE--FRKFLKALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L N GF D  R  +      Y++W Y   +  KN G RID+ + S    + L  A I
Sbjct: 174 FNELLNAGFIDTFRYFYPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTHLKDALI 233

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
                G    SDH PV + L
Sbjct: 234 YKDILG----SDHCPVGLEL 249


>gi|251779069|ref|ZP_04821989.1| exodeoxyribonuclease III [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|243083384|gb|EES49274.1| exodeoxyribonuclease III [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 251

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 71/257 (27%), Positives = 117/257 (45%), Gaps = 13/257 (5%)

Query: 5   TVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
            + +WNVN +RA +       +KE+N DI C+QE+K ++           +Y      +K
Sbjct: 3   KLISWNVNGLRACVKKGFLDILKESNADIFCVQESKLQEGQIDLNLDGYYDY-WNYAEKK 61

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            Y+G A+ SK +P+ I   +  ++ D + R +   F        + N+Y P+     +  
Sbjct: 62  GYSGTAVFSKEKPLNISLGIGIEEHDKEGRVLTLEFE----EFYLVNVYTPNSQQKLARI 117

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
             D     +   R     L  ++ +I  GD N+  +  D  NP    N+A F+ E R+ F
Sbjct: 118 --DYRMAWENDFRHYLNELNKDKSVIVCGDLNVAHKEIDLKNPKNNRNNAGFSDEEREKF 175

Query: 184 QKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
            +L   GF D  R  +      YS+W Y  ++ + N G RID+ ++S +    L  A I 
Sbjct: 176 GELLKSGFIDTYRYFYPGKEGAYSWWSYRFNARANNAGWRIDYFLVSKDFEDRLVDANIH 235

Query: 243 TKPRGWTKPSDHTPVIV 259
           T+  G    SDH PV +
Sbjct: 236 TQIEG----SDHCPVEL 248


>gi|325205029|gb|ADZ00483.1| exodeoxyribonuclease III [Neisseria meningitidis M01-240355]
          Length = 259

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 64/264 (24%), Positives = 120/264 (45%), Gaps = 13/264 (4%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++ + + NVN IR+        +I  +  DI+C+QE K ++ +   +       H     
Sbjct: 1   MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADLSADMKNPHGMHGHWHC 60

Query: 62  --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             ++ Y+GVA+ SK +P  +   +  ++ D + RF+   F      L + +LYLP G+  
Sbjct: 61  AEKRGYSGVAVYSKRKPDNVQIGMGIEEFDREGRFVRCDFG----RLSVISLYLPSGSSA 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +   K  ++  F             ++  GD+N+  Q  D  N    + ++ F  E 
Sbjct: 117 EERQQV-KYCFLDAFYPMLEAMKNEGRDIVVCGDWNVAHQNIDLKNWKGNQKNSGFLPEE 175

Query: 180 RQSF-QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R+   + +  +G+TD  R  +     Y++W     +++K+ G RID+ M++PE  +   S
Sbjct: 176 REWIGKVIHKLGWTDMWRTLYPDVPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVS 235

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
           A +        K SDH P++V  D
Sbjct: 236 AHVYKD----EKFSDHAPLVVEYD 255


>gi|325299788|ref|YP_004259705.1| exodeoxyribonuclease III Xth [Bacteroides salanitronis DSM 18170]
 gi|324319341|gb|ADY37232.1| exodeoxyribonuclease III Xth [Bacteroides salanitronis DSM 18170]
          Length = 251

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 70/258 (27%), Positives = 108/258 (41%), Gaps = 13/258 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA             N D  CLQETK +              +     +
Sbjct: 1   MKLISWNVNGLRACCDKGFRDAFTRLNADFFCLQETKMQAGQLDL-AFDGYTSYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +++QP+ +   +  D+ D + R I      N   + +       G      
Sbjct: 60  KGYSGTAIFTRHQPLNVSYGMGIDEHDREGRVITLEME-NFYLVTVYTPNSQDGLKRLDY 118

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +        +   R     L+ ++P++  GD N+  +  D  NP     +A FT + R+ 
Sbjct: 119 R-----MTWEDAFRRYLLELDAKKPVLVCGDLNVAHKEIDLKNPKTNRMNAGFTDQEREK 173

Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           FQ L + GF D  R  +     +YS+W Y   +  KN G RID+ + S      L SA I
Sbjct: 174 FQTLLDAGFIDTFRYFYPEQEGIYSWWSYRFRAREKNAGWRIDYFLASARLAGKLESAAI 233

Query: 242 DTKPRGWTKPSDHTPVIV 259
            T+  G    SDH PV V
Sbjct: 234 HTEIFG----SDHCPVEV 247


>gi|239999924|ref|ZP_04719848.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae 35/02]
 gi|240116863|ref|ZP_04730925.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae PID1]
 gi|268595731|ref|ZP_06129898.1| exodeoxyribonuclease [Neisseria gonorrhoeae 35/02]
 gi|268602539|ref|ZP_06136706.1| nuclease [Neisseria gonorrhoeae PID1]
 gi|293397969|ref|ZP_06642175.1| exodeoxyribonuclease III [Neisseria gonorrhoeae F62]
 gi|268549120|gb|EEZ44538.1| exodeoxyribonuclease [Neisseria gonorrhoeae 35/02]
 gi|268586670|gb|EEZ51346.1| nuclease [Neisseria gonorrhoeae PID1]
 gi|291611915|gb|EFF40984.1| exodeoxyribonuclease III [Neisseria gonorrhoeae F62]
 gi|317165222|gb|ADV08763.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 259

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 60/264 (22%), Positives = 112/264 (42%), Gaps = 13/264 (4%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++ + + NVN IR+        +I  +  DI+C+QE K ++ +   +       H     
Sbjct: 1   MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADLSADMKNPHGMHGYWHC 60

Query: 62  --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             ++ Y+GVA+ SK +P  +   +  ++ D + RF+   F                    
Sbjct: 61  AEKRGYSGVAVYSKRKPDNVQIGMGIEEFDREGRFVRCDFGRLGVI-----SLYLPSGSS 115

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +   K  ++  F             ++  GD+NI  Q  D  N    + ++ F  E 
Sbjct: 116 AEERQQVKYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEE 175

Query: 180 RQSFQKLQN-MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R+   K+ + +G+TD  R  +     Y++W     +++K+ G RID+ M++PE  +   S
Sbjct: 176 REWIGKVMHTLGWTDMWRTLYPDVPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVS 235

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
           A +        K SDH P++V  D
Sbjct: 236 AHVYKD----EKFSDHAPLVVEYD 255


>gi|255066692|ref|ZP_05318547.1| exodeoxyribonuclease III [Neisseria sicca ATCC 29256]
 gi|255049020|gb|EET44484.1| exodeoxyribonuclease III [Neisseria sicca ATCC 29256]
          Length = 259

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 60/264 (22%), Positives = 113/264 (42%), Gaps = 13/264 (4%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++ + + NVN IR+        +I  +  DI+C+QE K ++ +   E       H     
Sbjct: 1   MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADLSDEMKNPHGMHGHWHC 60

Query: 62  --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             ++ Y+GVA+ SK  P  +   +  ++ D + RF+   F   +                
Sbjct: 61  AEKRGYSGVAVYSKRAPDNVQIGMGIEEFDREGRFVRCDFGKLSVI-----SLYLPSGTS 115

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              + + K  ++  F             ++  GD+NI  Q  D  N    + ++ F  E 
Sbjct: 116 APERQELKYRFLDAFYPMLEAMKAEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEE 175

Query: 180 RQSF-QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R+   + +  +G+TD  R  +  +  Y++W     +++K+ G RID+ M++PE  +   S
Sbjct: 176 REWIGKVIHTLGWTDMWRTLYPDNPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVS 235

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
           A +        K SDH P++V  D
Sbjct: 236 AHVYKD----EKFSDHAPLVVEYD 255


>gi|240851283|ref|YP_002972686.1| exodeoxyribonuclease III [Bartonella grahamii as4aup]
 gi|240268406|gb|ACS51994.1| exodeoxyribonuclease III [Bartonella grahamii as4aup]
          Length = 269

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 80/267 (29%), Positives = 119/267 (44%), Gaps = 9/267 (3%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCG 61
           +  +ATWN+NSIR R+  +  +++  + D++CLQETK  D  FP    ++  Y HI   G
Sbjct: 2   LFRIATWNINSIRLRLAQVFQYLELFSADVLCLQETKCPDALFPVGAFEAAGYKHIALSG 61

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           QKSYNGVAI+S+    ++         +   R+I      + + LRI N Y+P G  I  
Sbjct: 62  QKSYNGVAIVSRLPFKKVEKRFFCQ--NQDCRYISVIVEAHGRNLRIHNFYVPAGGDIPD 119

Query: 122 TKYDDKISWIKRF---LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL- 177
              ++K      F   +             +  GD NI P   D ++          T  
Sbjct: 120 ADVNEKFQHKLDFLEEMSSIRADQGDGLSSLLVGDLNIAPLAEDVWSHQQLLKVVSHTPI 179

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSL 235
           E  +        G+ D +R        LY++W Y A  W+  + G R+DHI  SP+    
Sbjct: 180 ETERLQDLCCQGGWVDLMRLHIPVPTKLYTWWSYRARDWAFTDYGRRLDHIWSSPDLAPF 239

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262
           +    I    RGW +PSDH PV    D
Sbjct: 240 VVDLSIFRDARGWERPSDHIPVQTVFD 266


>gi|256370404|ref|YP_003107915.1| exodeoxyribonuclease III [Brucella microti CCM 4915]
 gi|256000567|gb|ACU48966.1| exodeoxyribonuclease III [Brucella microti CCM 4915]
          Length = 268

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 75/266 (28%), Positives = 123/266 (46%), Gaps = 9/266 (3%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64
           +ATWN+NS+R R+  +  ++++  PD++CLQETK  D  FP +  ++L Y HI   GQK 
Sbjct: 5   IATWNINSVRLRMPLVEQFLRDYQPDVLCLQETKCPDDLFPAKGFRALGYEHIAISGQKG 64

Query: 65  YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124
           Y+GVA +S+     +             R + A      + LRI N Y+P G      + 
Sbjct: 65  YHGVATVSRRPLDGVEK--VDFCNMGDCRHLSAVVEAGDRKLRIHNFYVPAGGDEPDPEI 122

Query: 125 DDKISWIKRF---LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180
           + K +    F   +R      +     +  GD NI P  +D ++          T  E  
Sbjct: 123 NPKFAHKLAFLEEMRAIIADRKDGCSSLLVGDLNIAPLENDVWSHKQLLKIVSHTPIETE 182

Query: 181 QSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHS 238
                    G++D +R        +Y++W Y A  W   ++G R+DH+  S +  S +  
Sbjct: 183 TLEDLRIKGGWSDLMRHLIAADQKIYTWWSYRAKDWDAADRGRRLDHVWGSADLESHIKG 242

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIP 264
            ++    RGW +PSDH PVI + ++ 
Sbjct: 243 LQVLRDARGWDRPSDHVPVIATFNLD 268


>gi|289666316|ref|ZP_06487897.1| exodeoxyribonuclease III [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 266

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 66/273 (24%), Positives = 111/273 (40%), Gaps = 24/273 (8%)

Query: 4   VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + ++N N +R A      AW    + D++C+QETK ++            Y       
Sbjct: 1   MRIISFNANGLRSAASKGFFAWFAAQDADVLCVQETKAQEHQLAGPDFLPTGYKAWFRDA 60

Query: 62  --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GVAI S+Y+P E+ T L   + D + R+IEA F      L + + Y+P G+  
Sbjct: 61  STKKGYSGVAIYSRYEPDEVRTALGWPEFDEEGRYIEARFG----NLSVVSFYIPSGS-S 115

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +   K   ++       + L      +  GD+NI+    D  N    + ++      
Sbjct: 116 GELRQGYKFQVMEWLRPILDEWLASGRQYVLCGDWNIVRTALDIKNWKSNQKNSGCLPPE 175

Query: 180 RQSFQKLQN-----------MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
           R     L              G+ D+ R  H     Y++W     + + N G RID+ ++
Sbjct: 176 RDWLNGLCADVPEDANAAEGRGWVDSYRVLHPQGQDYTWWSNRGAARTNNVGWRIDYQLV 235

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           +P     L +  I  + R     SDH P IV  
Sbjct: 236 TPGLRDTLKACSIYREER----FSDHAPYIVDY 264


>gi|217031877|ref|ZP_03437380.1| hypothetical protein HPB128_199g85 [Helicobacter pylori B128]
 gi|298735503|ref|YP_003728024.1| exodeoxyribonuclease III [Helicobacter pylori B8]
 gi|216946529|gb|EEC25131.1| hypothetical protein HPB128_199g85 [Helicobacter pylori B128]
 gi|298354688|emb|CBI65560.1| exodeoxyribonuclease III [Helicobacter pylori B8]
          Length = 250

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 68/260 (26%), Positives = 114/260 (43%), Gaps = 13/260 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      +    + D+ C+QE+K + +   FE             +
Sbjct: 1   MKLISWNVNGLRACMTKGFMDFFNSVDADVFCIQESKMQQEQNTFE-FNGYFDFWNCAIK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+GV   +K +P+ +   +  ++ D + R I   F     +  + N+Y P+     S 
Sbjct: 60  KGYSGVVTFTKKEPLSVSYGINIEEHDKEGRVITCEFE----SFYLVNVYTPNSQQALSR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                   ++   +   + LEL++P+I  GD N+     D  NP     +A F+ E R  
Sbjct: 116 LSYRMSWEVE--FKKFLKALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L N GF D  R  +      Y++W Y   +  K+ G RID+ + S    + L  A I
Sbjct: 174 FSELLNAGFIDTFRYFYPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALI 233

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
                G    SDH PV + L
Sbjct: 234 YKDILG----SDHCPVGLEL 249


>gi|289671111|ref|ZP_06492186.1| exodeoxyribonuclease III [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 266

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 65/273 (23%), Positives = 111/273 (40%), Gaps = 24/273 (8%)

Query: 4   VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + ++N N +R A      AW    + D++C+QETK ++            Y       
Sbjct: 1   MRIISFNANGLRSAASKGFFAWFAAQDADVLCVQETKAQEHQLAGPDFLPTGYKAWFRDA 60

Query: 62  --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GVAI S+++P E+ T L   + D + R+IEA F      L + + Y+P G+  
Sbjct: 61  STKKGYSGVAIYSRHEPDEVRTALGWPEFDEEGRYIEARFG----NLSVVSFYIPSGS-S 115

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +   K   ++       + L      +  GD+NI+    D  N    + ++      
Sbjct: 116 GELRQGYKFQVMEWLRPILDEWLASGRQYVLCGDWNIVRTALDIKNWKSNQKNSGCLPPE 175

Query: 180 RQSFQKLQN-----------MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
           R     L              G+ D+ R  H     Y++W     + + N G RID+ ++
Sbjct: 176 RDWLNGLCADVPEDANAAEGRGWVDSYRVLHPQGQDYTWWSNRGAARTNNVGWRIDYQLV 235

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           +P     L +  I  + R     SDH P IV  
Sbjct: 236 TPGLRDTLKACSIYREER----FSDHAPYIVDY 264


>gi|259047804|ref|ZP_05738205.1| exodeoxyribonuclease III [Granulicatella adiacens ATCC 49175]
 gi|259035481|gb|EEW36736.1| exodeoxyribonuclease III [Granulicatella adiacens ATCC 49175]
          Length = 254

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 74/264 (28%), Positives = 125/264 (47%), Gaps = 14/264 (5%)

Query: 4   VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPF-ETLQSLNYHIETC 60
           + +ATWNVN IR+ ++   L  ++ E+NPDI+CLQETK +                  + 
Sbjct: 1   MKLATWNVNGIRSVLNKGALQEYVLESNPDILCLQETKAQQDQVELGMEFSEYEVFFNSA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+G AI +K +P+ +   +  ++ D + R I A +        +  +Y P+     
Sbjct: 61  VKKGYSGTAIFTKEKPLSVEYGIGIEEHDQEGRVITAEYE----KFYLVTVYTPNAKRDL 116

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
           S    +     +       ++LE  +P+IF GD N+  +  D  NP     +A FT E R
Sbjct: 117 SRL--EYRQVWEDDFLAFIKKLEETKPVIFCGDLNVAHKEIDLANPKTNTMNAGFTKEER 174

Query: 181 QSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
             F ++ N    DA R  +      YS+W Y   + ++N G RID+ ++S   T+ L   
Sbjct: 175 AKFDQVVNNDLVDAFRYLYPDTLGAYSWWSYMGGARARNVGWRIDYFVISQPLTAFLQEV 234

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
           +I +   G    SDH PV + +++
Sbjct: 235 KIRSDVTG----SDHCPVEMKIEL 254


>gi|59802302|ref|YP_209014.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae FA 1090]
 gi|194099736|ref|YP_002002871.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae NCCP11945]
 gi|240013129|ref|ZP_04720042.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae DGI18]
 gi|240015572|ref|ZP_04722112.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae FA6140]
 gi|240120200|ref|ZP_04733162.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae PID24-1]
 gi|254492721|ref|ZP_05105892.1| nuclease [Neisseria gonorrhoeae 1291]
 gi|59719197|gb|AAW90602.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae FA 1090]
 gi|193935026|gb|ACF30850.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae NCCP11945]
 gi|226511761|gb|EEH61106.1| nuclease [Neisseria gonorrhoeae 1291]
          Length = 259

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 59/264 (22%), Positives = 111/264 (42%), Gaps = 13/264 (4%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++ + + NVN IR+        +I  +  DI+C+QE K ++ +   +       H     
Sbjct: 1   MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADLSADMKNPHGMHGYWHC 60

Query: 62  --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             ++ Y+GVA+ SK +P  +   +  ++ D + RF+   F                    
Sbjct: 61  AEKRGYSGVAVYSKRKPDNVQIGMGIEEFDREGRFVRCDFGRLGVI-----SLYLPSGSS 115

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +   K  ++  F             ++  GD+NI  Q  D  N    + ++ F  E 
Sbjct: 116 AEERQQVKYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEE 175

Query: 180 RQSF-QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R+   + +  +G+TD  R  +     Y++W     +++K+ G RID+ M++PE  +   S
Sbjct: 176 REWIGKVIHTLGWTDMWRTLYPDVPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVS 235

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
           A +        K SDH P++V  D
Sbjct: 236 AHVYKD----EKFSDHAPLVVEYD 255


>gi|188585577|ref|YP_001917122.1| exodeoxyribonuclease III [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|179350264|gb|ACB84534.1| exodeoxyribonuclease III [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 251

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 71/260 (27%), Positives = 112/260 (43%), Gaps = 13/260 (5%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      +  E + DI C+QETK ++     E L     +     +
Sbjct: 1   MKLISWNVNGLRACLKKGFLEYFNEVSGDIFCVQETKLQEGQIDLE-LPGYFQYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K QP+ +   +     D + R I   F                 +     
Sbjct: 60  KGYSGTAIFTKIQPLTVQYGIGEAKHDKEGRVITLEFCD-----YYLVNVYTPNSQRELA 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           + D ++ W   F +     L+ E+P+I  GD N+  +  D  NP   + +A FT E R  
Sbjct: 115 RLDYRLQWEDAF-KNYLVNLDSEKPVIVCGDLNVAHKEIDLKNPKNNKRNAGFTEEERNK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             +L N GF D  R  +      Y++W Y   +  +N G RID+ + S +  + L  A I
Sbjct: 174 LTELLNAGFIDTFRYFYPDTEGAYTWWSYITKARERNAGWRIDYFLASQKLDNWLTDAEI 233

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
                G    SDH PV + L
Sbjct: 234 HADIMG----SDHCPVALKL 249


>gi|152979786|ref|YP_001351880.1| exodeoxyribonuclease III [Janthinobacterium sp. Marseille]
 gi|151279863|gb|ABR88273.1| exodeoxyribonuclease III [Janthinobacterium sp. Marseille]
          Length = 259

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 61/267 (22%), Positives = 106/267 (39%), Gaps = 15/267 (5%)

Query: 3   VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59
           ++ + + N+N IR A       W+ +++ D IC+QE K +  +   E L    Y  +   
Sbjct: 1   MLKIVSANLNGIRSAAKKGFFTWMAKHDADFICVQELKAQAPDMTPEFLTPPGYTGYFHY 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G  +  K  P  +       + D + R+++  F      L + ++Y P G+  
Sbjct: 61  AEKKGYSGAGVYCKTVPDHVQIGFGCSEFDAEGRYVQCDFG----KLSVISVYCPSGSSS 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +          FL    +        +  GD+NI     D  N      ++ F  E 
Sbjct: 117 EERQLAKFRFMDV-FLPHLLELKAQGRDFVICGDWNIAHNEIDLKNFKGNRKNSGFLPEE 175

Query: 180 RQSFQKLQNM-GFTDAIRATHDT--HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
           R    ++ +  G  D  R  H T     Y++W     +++KN G RID+ + +P      
Sbjct: 176 RAWLSRVFDEVGLVDVYRRLHPTTTEECYTWWSNRGQAYAKNVGWRIDYQVATPALAETA 235

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263
            SA I    R     SDH P+ +  D 
Sbjct: 236 RSAAIYKDER----FSDHAPLTIDYDW 258


>gi|269123555|ref|YP_003306132.1| exodeoxyribonuclease III Xth [Streptobacillus moniliformis DSM
           12112]
 gi|268314881|gb|ACZ01255.1| exodeoxyribonuclease III Xth [Streptobacillus moniliformis DSM
           12112]
          Length = 251

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 72/260 (27%), Positives = 109/260 (41%), Gaps = 13/260 (5%)

Query: 5   TVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
              +WNVN +RA I      +  E  P+II LQE K  +     E L+    +     +K
Sbjct: 3   KYISWNVNGLRACIKKGFLDYFNEQKPNIIGLQEIKMSEGQLDLE-LEGYYTYYNYAEKK 61

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            Y+G AI +  +PI +   +  ++ D + R I A F                   +    
Sbjct: 62  GYSGTAIFTDVEPISVSYGIGIEEHDKEGRVITAEFEDYYFVTVYTPNSKNELERLDYRM 121

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
                   +   R   ++LE ++P+I  GD N+  +  D  NP      A FT+E R  F
Sbjct: 122 ------IWEDEFRSYLKKLEEKKPVIVCGDLNVAHKEIDLKNPKSNTRSAGFTIEERNKF 175

Query: 184 QKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
            +L   GF D  R  +    H YS+W Y  ++   N G RID+  +S      L  A I 
Sbjct: 176 TELIENGFIDTFRYFYPDKIHAYSWWSYRGNARKNNTGWRIDYFCVSSSLKDRLVDAEIH 235

Query: 243 TKPRGWTKPSDHTPVIVSLD 262
            K  G    SDH PV++ ++
Sbjct: 236 DKVEG----SDHCPVVLYIN 251


>gi|315641336|ref|ZP_07896412.1| exodeoxyribonuclease III [Enterococcus italicus DSM 15952]
 gi|315482909|gb|EFU73429.1| exodeoxyribonuclease III [Enterococcus italicus DSM 15952]
          Length = 252

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 69/258 (26%), Positives = 108/258 (41%), Gaps = 13/258 (5%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +  N      + + D  CLQETK +      + L     +     +
Sbjct: 1   MKLISWNVNGLRAVMKKNFMDVFTQLDADFFCLQETKLQAGQIEMD-LPGYTQYWNYAVK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K     +   +  ++ D + R I   +        +   Y P+       
Sbjct: 60  KGYSGTAIFAKEPADNVFYGIGKEEHDQEGRVITLEYP----QFYLVTCYTPNSQNELKR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
              D     +         L+ + P+I  GD N+  Q  D  N    + +A FT E R  
Sbjct: 116 L--DYRMEWEDDFVAYLDELKKDRPVIVCGDLNVAHQEIDLKNWKTNQKNAGFTNEERAK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F  L + G+TD  R  +      YS+W Y  ++   N G RID+ ++S + TS L SA I
Sbjct: 174 FTALLDHGYTDTFRHFYPELTGAYSWWSYRFNARKNNAGWRIDYFIVSNDLTSHLTSASI 233

Query: 242 DTKPRGWTKPSDHTPVIV 259
                G    SDH PV +
Sbjct: 234 HADILG----SDHCPVEL 247


>gi|307638182|gb|ADN80632.1| Exo deoxyribonuclease III [Helicobacter pylori 908]
 gi|325996778|gb|ADZ52183.1| Exodeoxyribonuclease III [Helicobacter pylori 2018]
 gi|325998370|gb|ADZ50578.1| Exodeoxyribonuclease III [Helicobacter pylori 2017]
          Length = 250

 Score =  177 bits (449), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 68/260 (26%), Positives = 115/260 (44%), Gaps = 13/260 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      +    + D+ C+QE+K + +   FE  +          +
Sbjct: 1   MKLISWNVNGLRACMTKGFMDFFNSVDADVFCIQESKMQQEQNTFE-FKGYFDFWNCAIK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+GV   +K +P+ +   +  ++ D + R I   F     +  + N+Y P+     S 
Sbjct: 60  KGYSGVVTFTKKEPLSVSYGIDMEEHDKEGRVITCEFE----SFYLVNVYTPNSQQALSR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +   +   + LEL++P+I  GD N+     D  NP     +A F+ E R+ 
Sbjct: 116 L--SYRMSWEMEFKKFLKVLELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERKK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L N GF D  R  +      Y++W Y   +  K+ G RID+ + S    + L  A I
Sbjct: 174 FNELLNAGFIDTFRYFYPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALI 233

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
                G    SDH PV + L
Sbjct: 234 YKDILG----SDHCPVGLEL 249


>gi|221330655|ref|NP_001137776.1| recombination repair protein 1, isoform B [Drosophila melanogaster]
 gi|220901923|gb|ACL82983.1| recombination repair protein 1, isoform B [Drosophila melanogaster]
          Length = 706

 Score =  177 bits (449), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 69/263 (26%), Positives = 115/263 (43%), Gaps = 13/263 (4%)

Query: 4   VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNV  +RA +       I    PDI CLQETK  +   P E  +   YH      
Sbjct: 454 LKICSWNVAGLRAWLKKDGLQLIDLEEPDIFCLQETKCANDQLPEEVTRLPGYHPYWLCM 513

Query: 63  KSYN-GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
                GVAI SK  PI +   +  ++ D   R I A +        + N+Y+P+      
Sbjct: 514 PGGYAGVAIYSKIMPIHVEYGIGNEEFDDVGRMITAEYE----KFYLINVYVPNSGRKLV 569

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
                     ++  +   ++L+  +P++  GD N+   P D  NP     +A FT E R 
Sbjct: 570 NLEPR--MRWEKLFQAYVKKLDALKPVVICGDMNVSHMPIDLENPKNNTKNAGFTQEERD 627

Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
              +L  +GF D  R  +      Y+FW Y A++ ++N G R+D+ ++S      +    
Sbjct: 628 KMTELLGLGFVDTFRHLYPDRKGAYTFWTYMANARARNVGWRLDYCLVSERFVPKV---- 683

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263
           ++ + R     SDH P+ +  +I
Sbjct: 684 VEHEIRSQCLGSDHCPITIFFNI 706


>gi|17136678|ref|NP_476841.1| recombination repair protein 1, isoform A [Drosophila melanogaster]
 gi|150421656|sp|P27864|RRP1_DROME RecName: Full=Recombination repair protein 1; AltName:
           Full=DNA-(apurinic or apyrimidinic site) lyase
 gi|7295875|gb|AAF51175.1| recombination repair protein 1, isoform A [Drosophila melanogaster]
 gi|21428628|gb|AAM49974.1| LP05366p [Drosophila melanogaster]
          Length = 679

 Score =  177 bits (449), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 69/263 (26%), Positives = 115/263 (43%), Gaps = 13/263 (4%)

Query: 4   VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNV  +RA +       I    PDI CLQETK  +   P E  +   YH      
Sbjct: 427 LKICSWNVAGLRAWLKKDGLQLIDLEEPDIFCLQETKCANDQLPEEVTRLPGYHPYWLCM 486

Query: 63  KSYN-GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
                GVAI SK  PI +   +  ++ D   R I A +        + N+Y+P+      
Sbjct: 487 PGGYAGVAIYSKIMPIHVEYGIGNEEFDDVGRMITAEYE----KFYLINVYVPNSGRKLV 542

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
                     ++  +   ++L+  +P++  GD N+   P D  NP     +A FT E R 
Sbjct: 543 NLEPR--MRWEKLFQAYVKKLDALKPVVICGDMNVSHMPIDLENPKNNTKNAGFTQEERD 600

Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
              +L  +GF D  R  +      Y+FW Y A++ ++N G R+D+ ++S      +    
Sbjct: 601 KMTELLGLGFVDTFRHLYPDRKGAYTFWTYMANARARNVGWRLDYCLVSERFVPKV---- 656

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263
           ++ + R     SDH P+ +  +I
Sbjct: 657 VEHEIRSQCLGSDHCPITIFFNI 679


>gi|158340|gb|AAA62769.1| recombination repair protein [Drosophila melanogaster]
 gi|3342457|gb|AAC27621.1| recombination repair protein 1 [Drosophila melanogaster]
          Length = 679

 Score =  177 bits (449), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 69/263 (26%), Positives = 115/263 (43%), Gaps = 13/263 (4%)

Query: 4   VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNV  +RA +       I    PDI CLQETK  +   P E  +   YH      
Sbjct: 427 LKICSWNVAGLRAWLKKDGLQLIDLEEPDIFCLQETKCANDQLPEEVTRLPGYHPYWLCM 486

Query: 63  KSYN-GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
                GVAI SK  PI +   +  ++ D   R I A +        + N+Y+P+      
Sbjct: 487 PGGYAGVAIYSKIMPIHVEYGIGNEEFDDVGRMITAEYE----KFYLINVYVPNSGRKLV 542

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
                     ++  +   ++L+  +P++  GD N+   P D  NP     +A FT E R 
Sbjct: 543 NLEPR--MRWEKLFQAYVKKLDALKPVVICGDMNVSHMPIDLENPKNNTKNAGFTQEERD 600

Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
              +L  +GF D  R  +      Y+FW Y A++ ++N G R+D+ ++S      +    
Sbjct: 601 KMTELLGLGFVDTFRHLYPDRKGAYTFWTYMANARARNVGWRLDYCLVSERFVPKV---- 656

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263
           ++ + R     SDH P+ +  +I
Sbjct: 657 VEHEIRSQCLGSDHCPITIFFNI 679


>gi|114328666|ref|YP_745823.1| exodeoxyribonuclease III [Granulibacter bethesdensis CGDNIH1]
 gi|114316840|gb|ABI62900.1| exodeoxyribonuclease III [Granulibacter bethesdensis CGDNIH1]
          Length = 275

 Score =  177 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 81/276 (29%), Positives = 126/276 (45%), Gaps = 14/276 (5%)

Query: 1   MSVVTV--ATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETL-----QSL 53
           M+++ V  ATWN+NS+R R+  L   + E +PD++CLQETK  D  FP +       +  
Sbjct: 1   MALMRVRVATWNINSLRLRLPLLEKVLAELDPDVLCLQETKVPDPLFPADLFPGRAAEHH 60

Query: 54  NY-HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
            Y H+   G K YNGVAILS+     +    P        R +  +  + +  + + N Y
Sbjct: 61  GYAHVAYRGMKGYNGVAILSRIPFT-VDEAAPDWCAKGDCRHMAVSLAVPSGPVALHNFY 119

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLI---FAGDYNIIPQPHDCYNPIIW 169
           +P G        + K +    F+  A+     + P       GD NI P  HD ++    
Sbjct: 120 VPAGGDEPDPAINPKFAHKLAFVEEATAYFAAQSPFTRTVLVGDLNIAPLEHDVWSHKQL 179

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSW-SKNKGIRIDHIM 227
            N    T       ++    GF DAIR    +    Y++W Y    W + ++G R+DH+ 
Sbjct: 180 LNVVSHTPPETTRMRQWLETGFVDAIRHFVPSDRKHYTWWSYRNRDWRASDRGRRLDHVW 239

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +SP+  S L       + R W + SDH PV V+L +
Sbjct: 240 VSPDLVSSLQGHTTLKEARDWERTSDHVPVSVTLSL 275


>gi|118594300|ref|ZP_01551647.1| Exodeoxyribonuclease III:Exodeoxyribonuclease III xth
           [Methylophilales bacterium HTCC2181]
 gi|118440078|gb|EAV46705.1| Exodeoxyribonuclease III:Exodeoxyribonuclease III xth
           [Methylophilales bacterium HTCC2181]
          Length = 259

 Score =  177 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 66/264 (25%), Positives = 116/264 (43%), Gaps = 15/264 (5%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60
           + + T N+N IRA     +  W+K  NPD IC+QE K ++ +   + L    Y       
Sbjct: 1   MKIITLNLNGIRAASRKGMLEWLKLENPDFICVQELKAQEADLTSDMLNPYGYMGFFSYA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GV I SK  P++ V +     +D + R+ E       +   I +LYLP G+   
Sbjct: 61  VKKGYSGVGIYSKISPLQQVNNTGVPLIDDEGRYAE----FIFENFSIISLYLPSGS-SG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             + + K   ++  +R   +++   + +   GD+NI     D  N    + ++ F  E R
Sbjct: 116 EERQNVKYQVLEDIMRILKKKISQTKYVAVCGDFNIAHHEIDLKNFKGNKKNSGFLPEER 175

Query: 181 QSFQKLQNMGFTDAI---RATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
                L +      +    + H T   Y++W     +W  N G RID+ + +    +   
Sbjct: 176 DWLSTLFSKLQWVDVYRKISPHTTEDAYTWWSNRGQAWVNNVGWRIDYQIANQNLANKAL 235

Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261
           SA +  + R     SDH P+I++ 
Sbjct: 236 SASVYKEKR----FSDHAPLIINY 255


>gi|84622132|ref|YP_449504.1| exodeoxyribonuclease III [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|84366072|dbj|BAE67230.1| exodeoxyribonuclease III [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 266

 Score =  177 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 62/273 (22%), Positives = 105/273 (38%), Gaps = 24/273 (8%)

Query: 4   VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + ++N N +R A      AW    + D++C+QETK ++            Y       
Sbjct: 1   MRIISFNANGLRSAASKGFFAWFAAQDADVLCVQETKAQEHQLAGPDFLPTGYKAWFRDA 60

Query: 62  --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GVAI S+++P E+ T L   + D + R+IEA F       R    +       
Sbjct: 61  STKKGYSGVAIYSRHEPDEVRTALGWPEFDEEGRYIEARFGN-----RSVVSFYIPSGSS 115

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +   K   ++       + L      +  GD+NI+    D  N    + ++      
Sbjct: 116 GELRQGYKFQVMQWLRPILDEWLASGRQYVLCGDWNIVRTALDIKNWKSNQKNSGCLPPE 175

Query: 180 RQSFQKLQN-----------MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
           R     L              G+ D+ R  H     Y++W     + + N G RID+ ++
Sbjct: 176 RDWLNGLCADVPEDANAAEGRGWVDSYRVLHPQGQDYTWWSNRGAARTNNVGWRIDYQLV 235

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           +P     L +  I  + R     SDH P IV  
Sbjct: 236 TPGLRDTLRACSIYREER----FSDHAPYIVDY 264


>gi|312114912|ref|YP_004012508.1| exodeoxyribonuclease III Xth [Rhodomicrobium vannielii ATCC 17100]
 gi|311220041|gb|ADP71409.1| exodeoxyribonuclease III Xth [Rhodomicrobium vannielii ATCC 17100]
          Length = 268

 Score =  177 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 70/267 (26%), Positives = 114/267 (42%), Gaps = 8/267 (2%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCG 61
            + + TWN+NS+R R   +A +++E  PDI+CLQE K  D+ FP E  + L + HI  CG
Sbjct: 2   TLRITTWNINSVRLRFELVARFVRETRPDILCLQEIKCRDEFFPLEGFRELGFPHIAICG 61

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           Q  Y+GVA LSK     +         +            +  TL + N+Y+P G  I  
Sbjct: 62  QPGYHGVATLSKLPLEPLPRQSFCGT-EEARHLGAKVALPSGGTLALHNIYVPAGGDIPD 120

Query: 122 TKYDDKISWIKRF---LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
            + + K      +   L    +    +   +  GD+N+ P   D ++          T  
Sbjct: 121 PELNPKFKQKLAYLAALAKWERGWTDDANAVLVGDFNVAPLETDVWSHKQLLKVVSHTPV 180

Query: 179 VRQS--FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSL 235
             ++    ++         +       +YS+W Y A  W + ++G R+DHI  S      
Sbjct: 181 EVEALTKVRVDGRWVDLVRKVIPPEEKVYSWWSYRARDWAASDRGRRLDHIWGSAAMAER 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262
             +  +    RGW  PSDH PV +  +
Sbjct: 241 TRAVSVLKDARGWPGPSDHVPVTLDFE 267


>gi|240127208|ref|ZP_04739869.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae SK-93-1035]
 gi|268685568|ref|ZP_06152430.1| exodeoxyribonuclease [Neisseria gonorrhoeae SK-93-1035]
 gi|268625852|gb|EEZ58252.1| exodeoxyribonuclease [Neisseria gonorrhoeae SK-93-1035]
          Length = 259

 Score =  177 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 60/264 (22%), Positives = 112/264 (42%), Gaps = 13/264 (4%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++ + + NVN IR+        +I  +  DI+C+QE K ++ +   +       H     
Sbjct: 1   MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADLSADMKNPHGMHGHWHC 60

Query: 62  --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             ++ Y+GVA+ SK +P  +   +  ++ D + RF+   F                    
Sbjct: 61  AEKRGYSGVAVYSKRKPDNVQIGMGIEEFDREGRFVRCDFGRLGVI-----SLYLPSGSS 115

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +   K  ++  F             ++  GD+NI  Q  D  N    + ++ F  E 
Sbjct: 116 AEERQQVKYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEE 175

Query: 180 RQSFQKLQN-MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R+   K+ + +G+TD  R  +     Y++W     +++K+ G RID+ M++PE  +   S
Sbjct: 176 REWIGKVMHTLGWTDMWRTLYPDVPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVS 235

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
           A +        K SDH P++V  D
Sbjct: 236 AHVYKD----EKFSDHAPLVVEYD 255


>gi|88813076|ref|ZP_01128318.1| exodeoxyribonuclease III [Nitrococcus mobilis Nb-231]
 gi|88789709|gb|EAR20834.1| exodeoxyribonuclease III [Nitrococcus mobilis Nb-231]
          Length = 267

 Score =  177 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 71/268 (26%), Positives = 117/268 (43%), Gaps = 15/268 (5%)

Query: 1   MSVVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPF-ETLQSLNYHIE 58
           MS + + T N+N IRA        W     PD++C+QETK +              YH  
Sbjct: 5   MS-LKITTLNLNGIRAAARKGFFDWFARERPDVLCVQETKAQRAQLDGNALFFPEGYHAF 63

Query: 59  TCG--QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                Q+ Y+GVA+ ++ +P E+ T L   ++D + R++EA F   +        +    
Sbjct: 64  FHDAEQRGYSGVALYARQEPDEVRTGLGWPEIDREGRWLEARFGKLSV-----VSFYMPS 118

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
               + + D K ++++  L       E     I  GD+NI  +P D  N    + ++ F 
Sbjct: 119 GTSGAQRQDFKYTFMEPLLDHLKSLCEAGREYIICGDWNIAHKPIDLKNWRSNQKNSGFL 178

Query: 177 LEVRQSFQKLQNMG-FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R    +L +   F DA R  +     Y++W +   +W  N G RID+ M++P     
Sbjct: 179 PEERAWLDRLFDEAGFVDAFRLVNLEAEQYTWWSFRGQAWDNNTGWRIDYHMITPGLRER 238

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +  A I T  R     SDH P+ ++ D 
Sbjct: 239 VRGAEIYTAER----FSDHAPLTLAYDW 262


>gi|83720785|ref|YP_440709.1| exodeoxyribonuclease III [Burkholderia thailandensis E264]
 gi|167579381|ref|ZP_02372255.1| exodeoxyribonuclease III [Burkholderia thailandensis TXDOH]
 gi|167617482|ref|ZP_02386113.1| exodeoxyribonuclease III [Burkholderia thailandensis Bt4]
 gi|257140643|ref|ZP_05588905.1| exodeoxyribonuclease III [Burkholderia thailandensis E264]
 gi|83654610|gb|ABC38673.1| exodeoxyribonuclease III [Burkholderia thailandensis E264]
          Length = 256

 Score =  177 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 64/264 (24%), Positives = 110/264 (41%), Gaps = 14/264 (5%)

Query: 3   VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59
           ++ V T N+N IR A       W+ E N D +C+QE K    + P E +    +  +   
Sbjct: 1   MLRVITANLNGIRSAAKKGFFEWLGEQNADCVCVQEIKVSADDLPAEFVGPHGFRSYFHH 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G  + S+ +P +++      + D + R++EA F      L I ++Y+P G+  
Sbjct: 61  AQKKGYSGAGLYSRREPDDVIIGYGSSEFDAEGRYVEARFG----KLSIVSVYVPSGSSG 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +                  L+ +  +I  GD NI+ +  D  N    + ++    E 
Sbjct: 117 DERQQA--KYRFMDEFMPHLAELKSKREVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEE 174

Query: 180 RQSFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R    KL +  G+ D  R        Y++W     +++KN G RID+ + +P        
Sbjct: 175 RAWLTKLFDEVGYVDVFRTLDSRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGVAGTAKG 234

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
             I        K SDH P+ V  D
Sbjct: 235 TSIFRDI----KFSDHAPLTVDYD 254


>gi|325129291|gb|EGC52129.1| exodeoxyribonuclease III [Neisseria meningitidis OX99.30304]
 gi|325135311|gb|EGC57932.1| exodeoxyribonuclease III [Neisseria meningitidis M0579]
 gi|325201282|gb|ADY96736.1| exodeoxyribonuclease III [Neisseria meningitidis M01-240149]
          Length = 259

 Score =  177 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 65/264 (24%), Positives = 121/264 (45%), Gaps = 13/264 (4%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++ + + NVN IR+        +I  +  DI+C+QE K ++ +   +       H     
Sbjct: 1   MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADLSADMKNPHGMHGYWHC 60

Query: 62  --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             ++ Y+GVA+ SK +P  +   +  ++ D + RF+   F      L + +LYLP G+  
Sbjct: 61  AEKRGYSGVAVYSKRKPDNVQIGMGIEEFDREGRFVRCDFG----RLSVISLYLPSGSSA 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +   K  ++  F             ++  GD+NI  Q  D  N    + ++ F  E 
Sbjct: 117 EERQQV-KYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEE 175

Query: 180 RQSF-QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R+   + +  +G+TD  R  +  +  Y++W     +++K+ G RID+ M++PE  +   S
Sbjct: 176 REWIGKVIHTLGWTDMWRTLYPDNPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVS 235

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
           A +        K SDH P++V  D
Sbjct: 236 AHVYKD----EKFSDHAPLVVEYD 255


>gi|298370237|ref|ZP_06981553.1| exodeoxyribonuclease III [Neisseria sp. oral taxon 014 str. F0314]
 gi|298281697|gb|EFI23186.1| exodeoxyribonuclease III [Neisseria sp. oral taxon 014 str. F0314]
          Length = 258

 Score =  177 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 59/264 (22%), Positives = 115/264 (43%), Gaps = 13/264 (4%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++ + + NVN IR+        +I  +  DI+C+QE K ++ +   +       H     
Sbjct: 1   MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADLSADMKNPHGMHGHWHC 60

Query: 62  --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             ++ Y+GVA+ SK  P  +   +  ++ D + RF+   F   +                
Sbjct: 61  AEKRGYSGVAVYSKRAPDNVQIGMGIEEFDREGRFVRCDFGKLSVI-----SLYLPSGTS 115

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              + + K  ++  F             ++  GD+NI  Q  D  N    + ++ F  E 
Sbjct: 116 APERQELKYRFLDAFYPMLEAMKAEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEE 175

Query: 180 RQSF-QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R+   + ++++G+TD  R  +  +  Y++W     +++K+ G RID+ M++PE  +   S
Sbjct: 176 REWIGRVIRDLGWTDMWRTLYPDNPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVS 235

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
           A +        K SDH P++V  D
Sbjct: 236 AHVYKD----EKFSDHAPLVVEYD 255


>gi|187933475|ref|YP_001885926.1| exodeoxyribonuclease III [Clostridium botulinum B str. Eklund 17B]
 gi|187721628|gb|ACD22849.1| exodeoxyribonuclease III [Clostridium botulinum B str. Eklund 17B]
          Length = 251

 Score =  177 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 72/257 (28%), Positives = 119/257 (46%), Gaps = 13/257 (5%)

Query: 5   TVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
            + +WNVN +RA +       +KE+N DI C+QE+K ++       L+    +     +K
Sbjct: 3   KLISWNVNGLRACVKKGFIDILKESNADIFCVQESKLQEGQIDLN-LEGYYDYWNYAEKK 61

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            Y+G A+ SK +P+ I   +  ++ D + R +   F        + N+Y P+     +  
Sbjct: 62  GYSGTAVFSKEKPLNISLGIGIEEHDKEGRVLTLEFE----EFYLVNVYTPNSQQKLARI 117

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
             D     +   R     L   +P+I  GD N+  +  D  NP    N+A F+ E R+ F
Sbjct: 118 --DYRMAWENDFRSYLNELNKAKPVIVCGDLNVAHKEIDLKNPKNNRNNAGFSDEEREKF 175

Query: 184 QKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
            +L   GF D  R  +      YS+W Y  ++ + N G RID+ ++S +    L  A+I 
Sbjct: 176 GELLKSGFIDTYRYFYPDKEGAYSWWSYRFNARANNAGWRIDYFLVSKDFEDRLVDAKIH 235

Query: 243 TKPRGWTKPSDHTPVIV 259
           T+  G    SDH PV +
Sbjct: 236 TQIEG----SDHCPVEL 248


>gi|222150120|ref|YP_002551077.1| exodeoxyribonuclease III [Agrobacterium vitis S4]
 gi|221737102|gb|ACM38065.1| exodeoxyribonuclease III [Agrobacterium vitis S4]
          Length = 267

 Score =  177 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 78/265 (29%), Positives = 115/265 (43%), Gaps = 9/265 (3%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64
           + TWN+NS+R R+  +  ++K   PDI+CLQE K ++  FP E  Q+L Y +    GQK 
Sbjct: 5   LTTWNINSVRLRMPIVEHFLKLRQPDILCLQEIKCQNHEFPLEAFQALGYPYAILHGQKG 64

Query: 65  YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124
           Y+GVA +SK+   E          D +       +  N + +R+ N Y+P G    +   
Sbjct: 65  YHGVATVSKFPLTEDHRQDFCGVGDSRHISAIFEW--NGRRIRLHNFYVPAGGDEPNRDI 122

Query: 125 DDKISWIKRFLRFAS---QRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
           + K      F+          E     I  GD NI P  HD ++          T     
Sbjct: 123 NPKFGHKLDFVEEMKALSASAEPNTSAILVGDLNIAPLEHDVWSHKQLLKIVSHTPVETA 182

Query: 182 --SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLLHS 238
                  +        +    +  LY++W Y A  W   +KG R+DHI  SP+    L +
Sbjct: 183 GLLDVINRGGWVDLMRQLVDPSQKLYTWWSYRAKDWDSADKGRRLDHIWSSPDLLPSLKT 242

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263
             I  + RGW KPSDH PV V   +
Sbjct: 243 IEILREARGWEKPSDHVPVTVQFAL 267


>gi|154497021|ref|ZP_02035717.1| hypothetical protein BACCAP_01314 [Bacteroides capillosus ATCC
           29799]
 gi|150273420|gb|EDN00548.1| hypothetical protein BACCAP_01314 [Bacteroides capillosus ATCC
           29799]
          Length = 250

 Score =  177 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 65/260 (25%), Positives = 112/260 (43%), Gaps = 13/260 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +           + DI  +QETK +      + L     +  +  +
Sbjct: 1   MKLISWNVNGLRACLGKGFLESFAALDADIFSIQETKMQPGQAELD-LPGYKQYWNSAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G A+ ++ +P+ +   +  ++ D + R I   F        + N Y+P+     + 
Sbjct: 60  KGYSGTAVFTRLEPLNVTYGIGSEEHDREGRAITLEFE----DFYLVNCYVPNAQRELTR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
              D     +  LR     L+  +P+I+ GD N+  Q  D  N      +A FT E R  
Sbjct: 116 L--DWRMEWEDALRAYLLELDSRKPVIYCGDLNVAHQEIDLKNAKSNRGNAGFTDEERAK 173

Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             +L   GF D+ R  +      YS+W Y   +  KN G RID+ ++S      +  + I
Sbjct: 174 MTQLLEAGFVDSFRHLYPDKTGAYSWWSYMFHAREKNAGWRIDYFLVSKSIADKIGDSII 233

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
             +  G    SDH PV + +
Sbjct: 234 HPEIMG----SDHCPVELDI 249


>gi|13473590|ref|NP_105158.1| exodeoxyribonuclease III [Mesorhizobium loti MAFF303099]
 gi|14024340|dbj|BAB50944.1| exodeoxyribonuclease III [Mesorhizobium loti MAFF303099]
          Length = 268

 Score =  177 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 77/266 (28%), Positives = 116/266 (43%), Gaps = 9/266 (3%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64
           +ATWN+NS+R R+  +   + E  PD++CLQETK  D+ FP +  + L Y +I   GQK 
Sbjct: 5   IATWNINSVRLRMPIVERLLDEYAPDVLCLQETKVPDELFPEKAFRRLGYQYIAFHGQKG 64

Query: 65  YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124
           Y+GVA +++     +      D     +R +  T     +T+ + N Y+P G      + 
Sbjct: 65  YHGVATVARRPIEVVEKRRFCD--IEDSRHLSVTVRAGGKTILLHNFYVPAGGDEPDPEI 122

Query: 125 DDKISWIKRFLRFASQRLELEEPLI---FAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180
           + K      F+   +        +      GD NI P  HD ++     N    T  E  
Sbjct: 123 NKKFKHKLDFVAEMNAIRAEHTEVSASVLVGDLNIAPLEHDVWSHKQLLNVVSHTPVETE 182

Query: 181 QSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHS 238
                     + D +R        LY++W Y A  W   N+G R+DH+  SP        
Sbjct: 183 NFEAMRLAGNWVDLMRHNVPLDQKLYTWWSYRAQDWELSNRGRRLDHVWSSPNLVQDFAG 242

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIP 264
             I    RGW +PSDH PVI   D+ 
Sbjct: 243 YEILRAARGWERPSDHVPVIARFDLD 268


>gi|210135690|ref|YP_002302129.1| exodeoxyribonuclease III [Helicobacter pylori P12]
 gi|210133658|gb|ACJ08649.1| exodeoxyribonuclease [Helicobacter pylori P12]
          Length = 250

 Score =  177 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 69/260 (26%), Positives = 115/260 (44%), Gaps = 13/260 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      +    + D+ C+QE+K + +   FE  +          +
Sbjct: 1   MKLISWNVNGLRACMTKGFMDFFNSVDADVFCIQESKMQQEQNTFE-FKGYFDFWNCAIK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+GV   +K +P+ +   +  ++ D + R I   F     +  + N+Y P+     S 
Sbjct: 60  KGYSGVVTFTKKEPLSVNYGINMEEHDKEGRVITCEFE----SFYLVNVYTPNSQQALSR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                   ++   +   + LEL++P+I  GD N+     D  NP     +A F+ E R  
Sbjct: 116 LSYRMSWEVE--FKKFLKALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L N GF D  R  +      Y++W Y   +  KN G RID+ + S    + L  A I
Sbjct: 174 FSELLNAGFIDTFRYFYPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTCLKDALI 233

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
                G    SDH PV + L
Sbjct: 234 YKDILG----SDHCPVGLEL 249


>gi|218283512|ref|ZP_03489502.1| hypothetical protein EUBIFOR_02092 [Eubacterium biforme DSM 3989]
 gi|218215780|gb|EEC89318.1| hypothetical protein EUBIFOR_02092 [Eubacterium biforme DSM 3989]
          Length = 249

 Score =  177 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 61/261 (23%), Positives = 115/261 (44%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN IRA +       + E + D +C+QETK   +     T      +I +  +
Sbjct: 1   MKLISWNVNGIRAVMKKGFTDVLDELDADFVCIQETKAHPEQIESYTDNYPYQYINSAKR 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G  +L K +P+ I   +   + D + R I   +        +  +Y P        
Sbjct: 61  KGYSGTMVLCKKKPLSIKYGINVPEFDDEGRIITLEYP----EFYLVTVYTPTSG-DGLM 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           + D ++ W + F  +       ++P++  GD+N+     D   P +    A F+ E R S
Sbjct: 116 RLDYRLEWDEAFGNYLKSL---DKPVMACGDFNVANNEIDVPYPDMIRGTAGFSDEERDS 172

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F++       D  R  +     YS+W Y   +   N G+R+D+ ++S +    +  ++I 
Sbjct: 173 FKENLLSNLVDTYRVLNPETIQYSWWSYRGQARENNIGMRLDYWLVSNDLKDKIVDSKIL 232

Query: 243 TKPRGWTKPSDHTPVIVSLDI 263
               G    SDH P+++ ++I
Sbjct: 233 DDIYG----SDHCPIMLDINI 249


>gi|169334284|ref|ZP_02861477.1| hypothetical protein ANASTE_00682 [Anaerofustis stercorihominis DSM
           17244]
 gi|169259001|gb|EDS72967.1| hypothetical protein ANASTE_00682 [Anaerofustis stercorihominis DSM
           17244]
          Length = 251

 Score =  177 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 66/262 (25%), Positives = 116/262 (44%), Gaps = 13/262 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + TWNVN +RA +      +  E + DI  +QETK +      + +     + +   +
Sbjct: 1   MKLVTWNVNGLRACVNKGFMDFFNEVDSDIFSVQETKLQKGQIEMD-IPGYEEYWDYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G A  SK +PI + T L  +    + R I A +        + N+Y P+       
Sbjct: 60  KGYSGTATFSKIKPISVKTGLEEEKFSKEGRVITAEYE----NFYLVNVYTPNSQNELKR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
              D     + +       L+  +P+I  GD N+  +  D  NP   + +A FT+E R  
Sbjct: 116 L--DYRMEWEDYFADYLCELDKVKPVIMCGDLNVAHREIDLKNPKTNKKNAGFTIEERDK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
              L   GF D+ R  +     +Y++W Y  ++   N G RID+ ++S      +   +I
Sbjct: 174 MTSLLKRGFVDSYRYLYPDIEGVYTWWSYRFNARKNNAGWRIDYFIVSDRIKDKIKDVKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
            +   G    SDH PV++ +++
Sbjct: 234 FSDVMG----SDHCPVLLDIEL 251


>gi|240081821|ref|ZP_04726364.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae FA19]
 gi|240114099|ref|ZP_04728589.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae MS11]
 gi|240114662|ref|ZP_04728724.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae PID18]
 gi|240122497|ref|ZP_04735453.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae PID332]
 gi|240126654|ref|ZP_04739540.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae SK-92-679]
 gi|260441531|ref|ZP_05795347.1| putative exodeoxyribonuclease [Neisseria gonorrhoeae DGI2]
 gi|268597918|ref|ZP_06132085.1| exodeoxyribonuclease [Neisseria gonorrhoeae FA19]
 gi|268600168|ref|ZP_06134335.1| nuclease [Neisseria gonorrhoeae MS11]
 gi|268600307|ref|ZP_06134474.1| nuclease [Neisseria gonorrhoeae PID18]
 gi|268681088|ref|ZP_06147950.1| nuclease [Neisseria gonorrhoeae PID332]
 gi|268685234|ref|ZP_06152096.1| nuclease [Neisseria gonorrhoeae SK-92-679]
 gi|291044894|ref|ZP_06570603.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
 gi|268551706|gb|EEZ46725.1| exodeoxyribonuclease [Neisseria gonorrhoeae FA19]
 gi|268584299|gb|EEZ48975.1| nuclease [Neisseria gonorrhoeae MS11]
 gi|268584438|gb|EEZ49114.1| nuclease [Neisseria gonorrhoeae PID18]
 gi|268621372|gb|EEZ53772.1| nuclease [Neisseria gonorrhoeae PID332]
 gi|268625518|gb|EEZ57918.1| nuclease [Neisseria gonorrhoeae SK-92-679]
 gi|291011788|gb|EFE03784.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
          Length = 259

 Score =  177 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 59/264 (22%), Positives = 111/264 (42%), Gaps = 13/264 (4%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++ + + NVN IR+        +I  +  DI+C+QE K ++ +   +       H     
Sbjct: 1   MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADLSADMKNPHGMHGHWHC 60

Query: 62  --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             ++ Y+GVA+ SK +P  +   +  ++ D + RF+   F                    
Sbjct: 61  AEKRGYSGVAVYSKRKPDNVQIGMGIEEFDREGRFVRCDFGRLGVI-----SLYLPSGSS 115

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +   K  ++  F             ++  GD+NI  Q  D  N    + ++ F  E 
Sbjct: 116 AEERQQVKYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEE 175

Query: 180 RQSF-QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R+   + +  +G+TD  R  +     Y++W     +++K+ G RID+ M++PE  +   S
Sbjct: 176 REWIGKVIHTLGWTDMWRTLYPDVPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVS 235

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
           A +        K SDH P++V  D
Sbjct: 236 AHVYKD----EKFSDHAPLVVEYD 255


>gi|84500676|ref|ZP_00998925.1| exodeoxyribonuclease III, putative [Oceanicola batsensis HTCC2597]
 gi|84391629|gb|EAQ03961.1| exodeoxyribonuclease III, putative [Oceanicola batsensis HTCC2597]
          Length = 262

 Score =  177 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 81/264 (30%), Positives = 118/264 (44%), Gaps = 10/264 (3%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQK 63
           T+ATWN+NS+R R   +  +++E  PD++CLQE K+     P E    L Y H+   GQK
Sbjct: 4   TLATWNINSVRLREPLVLRFLQEEAPDVLCLQECKSPVDKIPREAFSDLGYTHMIARGQK 63

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            YNGVAILSK    ++           +              + I N Y+P G      +
Sbjct: 64  GYNGVAILSKMPIEDVGDRDFAALGHARHIAGRLENG-----VTIHNFYVPAGGDKPDRE 118

Query: 124 YDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180
            + K      +L         E P      GD NI P+  D +N          T  EV 
Sbjct: 119 VNVKFGQKLDYLTGMRDWFHAERPEKAVLVGDLNIAPREDDVWNHKQLLRIVSHTPIEVE 178

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHSA 239
              Q      + D  R      +LYS+W Y +  W   +KG R+DH+  +P+  +  HS+
Sbjct: 179 HLGQTQDAGKWVDITRKDIPQGNLYSWWSYRSPDWDAADKGRRLDHVWATPDIANAGHSS 238

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
           RI    RG+ +PSDH PV+ + D+
Sbjct: 239 RILRHIRGYEQPSDHAPVLATFDL 262


>gi|188578884|ref|YP_001915813.1| exodeoxyribonuclease III [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188523336|gb|ACD61281.1| exodeoxyribonuclease III [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 266

 Score =  177 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 62/273 (22%), Positives = 105/273 (38%), Gaps = 24/273 (8%)

Query: 4   VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + ++N N +R A      AW    + D++C+QETK ++            Y       
Sbjct: 1   MRIISFNANGLRSAASKGFFAWFAAQDADVLCVQETKAQEHQLAGPDFLPTGYKAWFRDA 60

Query: 62  --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GVAI S+++P E+ T L   + D + R+IEA F       R    +       
Sbjct: 61  STKKGYSGVAIYSRHEPDEVRTALGWPEFDEEGRYIEARFGN-----RSVVSFYIPSGSS 115

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +   K   ++       + L      +  GD+NI+    D  N    + ++      
Sbjct: 116 GELRQGYKFQVMQWLRPILDEWLASGRQYVLCGDWNIVRTALDIKNWKSNQKNSGCLPPE 175

Query: 180 RQSFQKLQN-----------MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
           R     L              G+ D+ R  H     Y++W     + + N G RID+ ++
Sbjct: 176 RDWLNGLCADVPDDANAAEGRGWVDSYRVLHPQGQDYTWWSNRGAARTNNVGWRIDYQLV 235

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           +P     L +  I  + R     SDH P IV  
Sbjct: 236 TPGLRDTLRACSIYREER----FSDHAPYIVDY 264


>gi|154688190|ref|YP_001423351.1| ExoA [Bacillus amyloliquefaciens FZB42]
 gi|154354041|gb|ABS76120.1| ExoA [Bacillus amyloliquefaciens FZB42]
          Length = 252

 Score =  177 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 71/263 (26%), Positives = 125/263 (47%), Gaps = 14/263 (5%)

Query: 4   VTVATWNVNSIRARIHNLA--AWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + +WNVN +RA +  +    +++E   DI+CLQETK +D     +  +  + +     
Sbjct: 1   MKLISWNVNGLRAVMKKIDINTYVQETAADILCLQETKVQDGQVSLQP-EGYHAYWNYAV 59

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G A+ SK +P+ ++  L  DD D + R I   F        +          +  
Sbjct: 60  KKGYSGTAVFSKEKPLHVLYGLGIDDHDQEGRVITLEFE---HVFVVNCYTPNAKRGLER 116

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
             Y       +   +   Q+L+ ++P+I  GD N+  +  D  NP     +A F+ + R+
Sbjct: 117 IDYR---LQWEADFKDYLQKLDRKKPVILCGDLNVAHREIDLKNPKANRKNAGFSEQERE 173

Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           +F  L N GFTD+ R  +      YS+W Y  ++  KN G R+D++++S      +  A 
Sbjct: 174 AFSALLNAGFTDSFRYLYPDQEGAYSWWSYRTNAREKNIGWRLDYVIVSDRLKQRISQAA 233

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263
           I     G    SDH PV +++D+
Sbjct: 234 ICADIMG----SDHCPVEMTVDL 252


>gi|89097572|ref|ZP_01170461.1| Exodeoxyribonuclease III [Bacillus sp. NRRL B-14911]
 gi|89087868|gb|EAR66980.1| Exodeoxyribonuclease III [Bacillus sp. NRRL B-14911]
          Length = 251

 Score =  177 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 63/262 (24%), Positives = 119/262 (45%), Gaps = 13/262 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN IRA +      +  E N DI C+QE+K ++       L   + +     +
Sbjct: 1   MKLVSWNVNGIRACVKKGFLDFFMEENADIFCIQESKLQEGQIELN-LDGYHQYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G A+ +K +P+ +   + G + + + R +   F        + N+Y P+ +     
Sbjct: 60  KGYSGTAVFTKEKPLYVSYGIAGRETEPEGRSLTLEFE----NFYLLNVYTPN-SKRDLA 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +   ++ W      +  + LE ++P+I  GD N+     D  N      ++ FT E R  
Sbjct: 115 RLPYRLEWEDEIREYILE-LEQKKPVILCGDLNVAHLDIDLKNARSNRGNSGFTDEERGK 173

Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
              L + GF D+ R  +      Y++W Y A    +N G RID+ ++S +    +  ++I
Sbjct: 174 MTSLLSEGFVDSFRYLYPEQEGAYTWWSYMAKVRERNIGWRIDYFIVSDKLKEHILDSKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
                G    SDH P+++ + +
Sbjct: 234 YCDIMG----SDHCPIMLEMAL 251


>gi|225024988|ref|ZP_03714180.1| hypothetical protein EIKCOROL_01877 [Eikenella corrodens ATCC
           23834]
 gi|224942218|gb|EEG23427.1| hypothetical protein EIKCOROL_01877 [Eikenella corrodens ATCC
           23834]
          Length = 257

 Score =  177 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 64/265 (24%), Positives = 117/265 (44%), Gaps = 13/265 (4%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETC 60
           + + + NVN IR+        ++  +  DI+C+QE K ++ +           H      
Sbjct: 1   MRIISANVNGIRSAYKKGFYEYLAASGADIVCIQELKAQEADLDDSMRAPHGMHGVWHCA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            ++ Y+GVA+ SK +P  + T +   + D + RF++  F      L + +LYLP G+   
Sbjct: 61  EKRGYSGVALYSKREPDRVQTGMGIAEFDAEGRFVQVDFG----NLSVISLYLPSGSSSE 116

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   K  ++  F     +       ++  GD+NI  Q  D  N      ++ F  E R
Sbjct: 117 ERQQL-KFRFLAAFYPMLRELKTQGRDIVICGDWNIAHQNIDLKNWKGNLKNSGFLPEER 175

Query: 181 QSF-QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           +   + +  +G+ D  R  +     Y++W     +++K+ G RID+ M +P       SA
Sbjct: 176 EWIGKVIVELGWVDIWRTLYPEMPGYTWWSQRGQAYAKDVGWRIDYQMATPALAERARSA 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIP 264
            +  +     K SDH P++V  D P
Sbjct: 236 HVYKQ----EKFSDHAPLVVDYDYP 256


>gi|268679182|ref|YP_003303613.1| exodeoxyribonuclease III [Sulfurospirillum deleyianum DSM 6946]
 gi|268617213|gb|ACZ11578.1| exodeoxyribonuclease III [Sulfurospirillum deleyianum DSM 6946]
          Length = 254

 Score =  177 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 62/262 (23%), Positives = 94/262 (35%), Gaps = 10/262 (3%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN IRA    N  +W+ E  PD++CLQE K E    P         H  TC  
Sbjct: 1   MKLISWNVNGIRAVANKNAFSWVDEEKPDVLCLQEIKAEAHQIPEPLFT----HPFTCKH 56

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
            +       S             +         E     +     +           +  
Sbjct: 57  INSATKKGYSGTMSFSTRLFDTTNTAWHIDHTKEGRILEHHFGDVVLFNVYFPNGQQSEE 116

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +   K+ +   FL        + + +I  GD N   +  D  NP   E+ + F    R  
Sbjct: 117 RLRHKMQFYSDFLAHTEALRTMGKGIIICGDVNTAHREIDLANPKANEDISGFLPIERAW 176

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
              L   G+ D  R  H      YS+W Y + +  +N G RID+  +S E    L  A I
Sbjct: 177 IDTLLAKGYLDTFREVHGNVKDAYSWWSYRSGARERNVGWRIDYFFISKELQKNLKDAFI 236

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
               +G    SDH PV + + +
Sbjct: 237 LPHIQG----SDHCPVGIEITL 254


>gi|57505734|ref|ZP_00371660.1| exodeoxyribonuclease III [Campylobacter upsaliensis RM3195]
 gi|57016007|gb|EAL52795.1| exodeoxyribonuclease III [Campylobacter upsaliensis RM3195]
          Length = 252

 Score =  177 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 63/262 (24%), Positives = 99/262 (37%), Gaps = 12/262 (4%)

Query: 4   VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WN+N +RA        W++E   D I  QE K  +  FP +  +    H+     
Sbjct: 1   MKLLSWNINGLRAICDKGGLEWLREEKIDFIGFQEIKASEDKFPKKIYEFPFKHMYFNSA 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K      ++S              D D           I    +   N            
Sbjct: 61  KRAGYSGVMSLCNFESETKKCEFFDDDEGRVLEHNFNNIVLFNIYFPN------GQKDEE 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           + + K+ +   FL + ++ L+  + +I  GD N   +  D  +P    N + F    R  
Sbjct: 115 RLNHKMKFYADFLAYLNKLLKEGKEVIICGDVNTAHKEIDLTHPKANANTSGFLPIERAW 174

Query: 183 FQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
              L  +GF D  R  + D    YS+W Y   +  +N G RID+  +S    S L +A I
Sbjct: 175 IDDLLALGFIDTFREINGDIKEKYSWWSYRMKARERNVGWRIDYFFISKGLKSKLKNAFI 234

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
                G    SDH PV + LDI
Sbjct: 235 KNDIFG----SDHAPVGIELDI 252


>gi|212213194|ref|YP_002304130.1| exodeoxyribonuclease III [Coxiella burnetii CbuG_Q212]
 gi|212011604|gb|ACJ18985.1| exodeoxyribonuclease III [Coxiella burnetii CbuG_Q212]
          Length = 259

 Score =  177 bits (448), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 63/263 (23%), Positives = 109/263 (41%), Gaps = 13/263 (4%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + T N+N IRA        W+K    DI+CLQETK   +    +      YH      
Sbjct: 1   MRIITLNLNGIRAAARRGFFDWLKRQKADIVCLQETKACLEITNGDQFHPKGYHCYYHDA 60

Query: 63  KS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           +   Y+GV I  + +P  + T L  +  D + R+I+A F   +                 
Sbjct: 61  EKSGYSGVGIYCREKPDRVTTRLGWEHADKEGRYIQADFGSLSV-----ASLYMPSGTTG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   K  ++ R+++     +  +   I  GD+NI+ +  D  N    +  +    E R
Sbjct: 116 EHRQKIKFDFMDRYMKRLKNIVHSKRSFIICGDWNIVHKDIDIKNFKSNQKHSGCLPEER 175

Query: 181 QS-FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
               +    +G  DA R  +     Y++W     +W KN G RID+ +++ +  + + S 
Sbjct: 176 AWLDEVFTKVGLVDAFRVVNQKPDQYTWWSSRGRAWEKNVGWRIDYQVITSDLKNSVKSE 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
           RI    R     SDH P+I+  +
Sbjct: 236 RIYKDKR----FSDHAPLIIDYE 254


>gi|967268|gb|AAC47024.1| class II apurinic/apyrimidinic(AP)-endonuclease [Dictyostelium
           discoideum]
          Length = 361

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 69/263 (26%), Positives = 115/263 (43%), Gaps = 10/263 (3%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFE-TLQSLNYHIETCG 61
           + + +WNV   ++ +       +++ NPD++CLQETK    N   +   +   YH     
Sbjct: 105 MKIISWNVAGFKSVLSKGFTECVEKENPDVLCLQETKINPSNIKKDQMPKGYEYHFIEAD 164

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           QK ++G  +L+K +P  I   +     D + R I   +        I N Y+P+      
Sbjct: 165 QKGHHGTGVLTKKKPNAITFGIGIAKHDNEGRVITLEYV----QFYIVNTYIPNAGTRGL 220

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            + D +I       +   ++L   +P+I+ GD N+     D  NP   +  A FT+E R 
Sbjct: 221 QRLDYRIKEWDVDFQAYLEKLNATKPIIWCGDLNVAHTEIDLKNPKTNKKSAGFTIEERT 280

Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           SF      G+ D+ R  +      Y+FW Y     SKN G R+D+ ++S      +    
Sbjct: 281 SFSNFLEKGYVDSYRHFNPGKEGSYTFWSYLGGGRSKNVGWRLDYFVVSKRLMDSIK--- 337

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263
           I    R     SDH P+ V +D+
Sbjct: 338 ISPFHRTSVMGSDHCPIGVVVDL 360


>gi|313667587|ref|YP_004047871.1| nuclease [Neisseria lactamica ST-640]
 gi|313005049|emb|CBN86481.1| putative nuclease [Neisseria lactamica 020-06]
          Length = 259

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 65/264 (24%), Positives = 120/264 (45%), Gaps = 13/264 (4%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++ + + NVN IR+        +I  +  DI+C+QE K ++ +   E       H     
Sbjct: 1   MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADLSEEMKNPHGMHGYWHC 60

Query: 62  --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             ++ Y+GVA+  K +P  +   +  ++ D + RF+   F      L + +LYLP G+  
Sbjct: 61  AEKRGYSGVAVYGKRKPDNVQIGMGIEEFDREGRFVRCDFG----RLSVISLYLPSGSSA 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +   K  ++  F             ++  GD+NI  Q  D  N    + ++ F  E 
Sbjct: 117 EERQQV-KYRFLDAFYPMLETMKNEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEE 175

Query: 180 RQSF-QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R+   + +  +G+TD  R  +  +  Y++W     +++K+ G RID+ M++PE  +   S
Sbjct: 176 REWIGKVIHTLGWTDMWRTLYPDNPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVS 235

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
           A +        K SDH P++V  D
Sbjct: 236 AHVYKD----EKFSDHAPLVVEYD 255


>gi|241759074|ref|ZP_04757185.1| exodeoxyribonuclease III [Neisseria flavescens SK114]
 gi|319639647|ref|ZP_07994394.1| exodeoxyribonuclease [Neisseria mucosa C102]
 gi|241320676|gb|EER56929.1| exodeoxyribonuclease III [Neisseria flavescens SK114]
 gi|317399218|gb|EFV79892.1| exodeoxyribonuclease [Neisseria mucosa C102]
          Length = 259

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 65/264 (24%), Positives = 120/264 (45%), Gaps = 13/264 (4%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++ + + NVN IR+        +I  +  DI+C+QE K ++ +   +       H     
Sbjct: 1   MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADLSDDMKNPHGMHGYWHC 60

Query: 62  --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             ++ Y+GVA+ SK +P  +   +  ++ D + RF+   F      L + +LYLP G+  
Sbjct: 61  AEKRGYSGVAVYSKRKPDNVQIGMGIEEFDREGRFVRCDFG----KLSVISLYLPSGSSA 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +   K  ++  F             ++  GD+NI  Q  D  N    + ++ F  E 
Sbjct: 117 EERQQV-KYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEE 175

Query: 180 RQSF-QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R+   + +  +G+TD  R  +     Y++W     +++K+ G RID+ M++PE  +   S
Sbjct: 176 REWIGKVIHKLGWTDMWRTLYPDVPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVS 235

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
           A +        K SDH P++V  D
Sbjct: 236 AHVYKD----EKFSDHAPLVVEYD 255


>gi|161831527|ref|YP_001596246.1| exodeoxyribonuclease III [Coxiella burnetii RSA 331]
 gi|161763394|gb|ABX79036.1| exodeoxyribonuclease III [Coxiella burnetii RSA 331]
          Length = 259

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 63/263 (23%), Positives = 109/263 (41%), Gaps = 13/263 (4%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + T N+N IRA        W+K    DI+CLQETK   +    +      YH      
Sbjct: 1   MRIITLNLNGIRAAARRGFFDWLKRQKADIVCLQETKACLEITNGDQFHPKGYHCYYHDA 60

Query: 63  KS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           +   Y+GV I  + +P  + T L  +  D + R+I+A F   +                 
Sbjct: 61  EKSGYSGVGIYCREKPDRVTTRLGWEHADKEGRYIQADFGSLSV-----ASLYMPSGTTG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   K  ++ R+++     +  +   I  GD+NI+ +  D  N    +  +    E R
Sbjct: 116 EHRQKIKFDFMDRYMKRLKNIVHSKRSFIICGDWNIVHKEIDIKNFKSNQKHSGCLPEER 175

Query: 181 QS-FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
               +    +G  DA R  +     Y++W     +W KN G RID+ +++ +  + + S 
Sbjct: 176 AWLDEVFTKVGLVDAFRVVNQKPDQYTWWSSRGRAWEKNVGWRIDYQVITSDLKNSVKSE 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
           RI    R     SDH P+I+  +
Sbjct: 236 RIYKDKR----FSDHAPLIIDYE 254


>gi|224371156|ref|YP_002605320.1| ExoA [Desulfobacterium autotrophicum HRM2]
 gi|223693873|gb|ACN17156.1| ExoA [Desulfobacterium autotrophicum HRM2]
          Length = 262

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 63/266 (23%), Positives = 111/266 (41%), Gaps = 15/266 (5%)

Query: 4   VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + +WNVN +RA +       +++ + D++ LQETK  +     E L    Y       
Sbjct: 6   LRLVSWNVNGLRAAVKKDFLKSMEQLDADVLMLQETKLSEDQRTDEMLLVDGYDSHWAYS 65

Query: 62  --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GVA  ++  P+ +   +  +  D + R +E  F        + N+Y P+G   
Sbjct: 66  SVKKGYSGVAAYTRPVPLAVAPGIGIERFDNEGRILELDFE----DFILFNVYFPNGQMS 121

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                  K+ + + F   A +  +    L+  GD+N      D  NP      + F    
Sbjct: 122 DER-LQYKMDFYEAFFAHADRLRKKGRSLVITGDFNTAHNEIDLKNPKPNSKRSGFLPVE 180

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL--LH 237
           R+   +L   G+ D  R  +     YS+W Y  ++ + N G RID+  ++ +      + 
Sbjct: 181 REVLDRLVERGYVDTFRHFNPDTVKYSWWSYRFNARANNAGWRIDYFFVTQDIIDKGWVT 240

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263
              ID    G    SDH PV + L +
Sbjct: 241 RTFIDNDILG----SDHCPVGIELTL 262


>gi|254476066|ref|ZP_05089452.1| exodeoxyribonuclease III [Ruegeria sp. R11]
 gi|214030309|gb|EEB71144.1| exodeoxyribonuclease III [Ruegeria sp. R11]
          Length = 262

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 82/264 (31%), Positives = 121/264 (45%), Gaps = 10/264 (3%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQK 63
           T+ATWN+NS+R R   +   ++E  PD++CLQE K+     P E   +L Y H+   GQK
Sbjct: 4   TLATWNINSVRLREPIVVKLLEEEGPDVLCLQECKSPVDKIPMEQFAALGYRHMIARGQK 63

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            YNGVAILS+    ++     GD                   + I N Y+P G  +   +
Sbjct: 64  GYNGVAILSRLPIEDV-----GDKDFAGLGHARHVAGRLENGVTIHNFYVPAGGDVPDRE 118

Query: 124 YDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180
            ++K      +L         + P      GD NI P+  D ++          T  EV 
Sbjct: 119 VNEKFGQKLDYLTDMRDWFHADRPEKSVLVGDLNIAPREDDVWDHKKLLKVVSHTPVEVE 178

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHSA 239
                ++  G++D  R       LYS+W Y A  W   +KG R+DH+  + +  S  HS+
Sbjct: 179 HFTDVMEAGGWSDVTRNDIPDGRLYSWWSYRAKDWDAADKGRRLDHVWATSDIKSSAHSS 238

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
           R+    RGW KPSDH PV  + D+
Sbjct: 239 RVLRDARGWEKPSDHAPVFATFDL 262


>gi|254388845|ref|ZP_05004077.1| exodeoxyribonuclease [Streptomyces clavuligerus ATCC 27064]
 gi|294813139|ref|ZP_06771782.1| Putative exodeoxyribonuclease [Streptomyces clavuligerus ATCC
           27064]
 gi|326441562|ref|ZP_08216296.1| exodeoxyribonuclease III [Streptomyces clavuligerus ATCC 27064]
 gi|197702564|gb|EDY48376.1| exodeoxyribonuclease [Streptomyces clavuligerus ATCC 27064]
 gi|294325738|gb|EFG07381.1| Putative exodeoxyribonuclease [Streptomyces clavuligerus ATCC
           27064]
          Length = 283

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 54/284 (19%), Positives = 97/284 (34%), Gaps = 24/284 (8%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++TV + NVN +RA        W+     D+ICLQE + E +  P    +   +      
Sbjct: 1   MLTVTSVNVNGLRAAAKKGFVEWLAGAAADVICLQEVRAEPEQLPEGVRRPEGWFTAHAP 60

Query: 62  Q--KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
              K   GV++ ++ +P E+       +     R+IEA     T    +       G   
Sbjct: 61  AGAKGRAGVSLYTRREPDEVRVGFGVPEFAHSGRYIEADLPGVTVA-SLYLPSGEVGTER 119

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              KY    +++       ++       ++  GD+NI     D  N    + +A F  E 
Sbjct: 120 QDEKYRFMDAFLPYLSELRARSAAAGREVVVCGDWNIAHHEADLKNWRGNKKNAGFLPEE 179

Query: 180 RQSFQKL--------------------QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK 219
           R    ++                                 D    Y++W Y   ++  + 
Sbjct: 180 RAWLSRVLDGGDGGEGDQGGEGGDSAGYAGYVDVVRALHPDQEGPYTWWSYRGRAFDNDS 239

Query: 220 GIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           G RID    +P   +      ++       + SDH PV V  ++
Sbjct: 240 GWRIDLQAATPSLAARAVKGYVERAATHEERWSDHAPVTVVYEL 283


>gi|83855258|ref|ZP_00948788.1| exodeoxyribonuclease III, putative [Sulfitobacter sp. NAS-14.1]
 gi|83843101|gb|EAP82268.1| exodeoxyribonuclease III, putative [Sulfitobacter sp. NAS-14.1]
          Length = 262

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 80/264 (30%), Positives = 119/264 (45%), Gaps = 10/264 (3%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQK 63
           T+ATWN+NS+R R   +   + E+ PD++CLQE K+     P        Y H+   GQK
Sbjct: 4   TLATWNINSVRLREPIVLKLLAEHGPDVLCLQECKSPVDKIPTAAFIEAGYTHMVARGQK 63

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            YNGVAILS+   +       GD                   + + N Y+P G  +   +
Sbjct: 64  GYNGVAILSRLPLV-----DAGDQDFATLGHARHVAAKLENGVTVHNFYVPAGGDVPDRE 118

Query: 124 YDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180
            ++K      +L         ++P      GD NI P+  D ++          T  EV 
Sbjct: 119 VNEKFGQKLDYLADMRDWFHGDKPEKSILVGDLNIAPREDDVWDHKKLLKVVSHTPIEVE 178

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHSA 239
           +  +     GF D  R      +LYS+W Y A  W   +KG R+DH+  +P+ +   HS+
Sbjct: 179 KLAETQDAGGFVDVTRQDIPQGNLYSWWSYRAKDWDAADKGRRLDHVWATPDISGAAHSS 238

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
           R+    RGW KPSDH PV  + D+
Sbjct: 239 RVLRDARGWEKPSDHAPVFATFDL 262


>gi|296445860|ref|ZP_06887812.1| exodeoxyribonuclease III Xth [Methylosinus trichosporium OB3b]
 gi|296256688|gb|EFH03763.1| exodeoxyribonuclease III Xth [Methylosinus trichosporium OB3b]
          Length = 266

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 72/268 (26%), Positives = 126/268 (47%), Gaps = 10/268 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62
           + + TWN+NS+R RI  +  ++K++ PD++CLQETK  +  FP+   +++ Y H    GQ
Sbjct: 1   MKITTWNINSVRLRIPLVVDFLKQHAPDVLCLQETKCRNAEFPYADFRAIGYEHFAINGQ 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT-- 120
           K Y+GVAI+SK+    +   +        AR +          + I N Y+P G      
Sbjct: 61  KGYHGVAIVSKHPLELL--DIRDFCETGDARHVSVGLPNGGTPITIHNFYVPAGGDEPDV 118

Query: 121 --STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
             + K+  K+ ++     + ++    +  ++  GD NI P   D ++          T  
Sbjct: 119 TINPKFAHKLGFLDEMKEWVTRERITDGRVVLVGDLNIAPLEQDVWSHKALLQTVSHTPV 178

Query: 179 VRQSFQKLQNMGFTDAIR--ATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSL 235
             Q    + + G           +   LY++W Y A  W+K ++G R+DH+  S   ++ 
Sbjct: 179 EVQKLGAVFDAGRWIDAMRRFVPEQEKLYTWWSYRASDWTKSDRGRRLDHVWTSQALSTE 238

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           L    +  + R W +PSDH PV V+L +
Sbjct: 239 LLEMNVLREARSWQRPSDHVPVTVALAV 266


>gi|254460243|ref|ZP_05073659.1| exodeoxyribonuclease III [Rhodobacterales bacterium HTCC2083]
 gi|206676832|gb|EDZ41319.1| exodeoxyribonuclease III [Rhodobacteraceae bacterium HTCC2083]
          Length = 262

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 82/268 (30%), Positives = 120/268 (44%), Gaps = 11/268 (4%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIET 59
           MS  T+ATWN+NS+R R   +   ++E  PD++CLQE K+  +  P E   +L Y H+  
Sbjct: 1   MS-FTLATWNINSVRLREPIVCKLLQEEAPDVLCLQECKSPVELIPTEAFAALGYTHMVA 59

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            GQK YNGVAILSK    E+           +    +    +      +     P G  +
Sbjct: 60  RGQKGYNGVAILSKLPIKEVGAEDFAQLGHARHIAGQLENGVIVHNFYV-----PAGGDV 114

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL 177
              + ++K      +L       +   P      GD NI P+  D ++          T 
Sbjct: 115 PDREKNEKFGQKLDYLTEMRDWFKTNSPRKSILVGDLNIAPREDDVWDHKKLLKIVSHTP 174

Query: 178 -EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSL 235
            EV      ++   + D  RA      LYS+W Y A  W   NKG R+DH+  + +  S 
Sbjct: 175 IEVEHLDDVMKAGDWHDVTRADISEGKLYSWWSYRAKDWDAANKGRRLDHVWATGDIASA 234

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            HS+R+    RGW KPSDH PV  + D+
Sbjct: 235 AHSSRVLRDARGWEKPSDHAPVFATFDL 262


>gi|157127237|ref|XP_001654881.1| ap endonuclease [Aedes aegypti]
 gi|108872984|gb|EAT37209.1| ap endonuclease [Aedes aegypti]
          Length = 612

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 67/262 (25%), Positives = 112/262 (42%), Gaps = 13/262 (4%)

Query: 5   TVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
            +++WNV  +R+ +      + +   PDI+C+QETK  D   P E      YH     + 
Sbjct: 361 KISSWNVAGLRSWVGKGGLDFFEHEKPDILCIQETKCVDDQLPEEVRHIKGYHPYWLCKP 420

Query: 64  SYN-GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
               GVAI SK  P  +   L  ++ D   R + A +    +   +       G  + + 
Sbjct: 421 GGYAGVAIYSKKMPFNVTYGLGDEEQDADGRLLTAEYE---KFFLVCVYVPNAGRGLVTL 477

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
               K            + L+ ++P+I  GD N+  +  D  NP   + +A FT E R+ 
Sbjct: 478 P---KRMRWDEKFHKYLKDLDAKKPVILCGDMNVAHEEIDLANPKTNKKNAGFTPEEREG 534

Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             KL ++GF D  R  +      Y+FW Y  ++ +KN G R+D+ + S      +    +
Sbjct: 535 MTKLLSLGFVDTFRQLYPEQSGAYTFWTYMGNARAKNVGWRLDYFITSERFVGKV----V 590

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
           D   R     SDH P+ + L +
Sbjct: 591 DNVIRSGVYGSDHCPLTLFLKV 612


>gi|15677903|ref|NP_275071.1| exodeoxyribonuclease [Neisseria meningitidis MC58]
 gi|218767349|ref|YP_002341861.1| putative nuclease [Neisseria meningitidis Z2491]
 gi|157883966|pdb|2JC5|A Chain A, Apurinic Apyrimidinic (Ap) Endonuclease (Nape) From
           Neisseria Meningitidis
 gi|7227344|gb|AAF42400.1| exodeoxyribonuclease [Neisseria meningitidis MC58]
 gi|121051357|emb|CAM07648.1| putative nuclease [Neisseria meningitidis Z2491]
 gi|316983973|gb|EFV62952.1| exodeoxyribonuclease III [Neisseria meningitidis H44/76]
 gi|319409609|emb|CBY89908.1| putative exodeoxyribonuclease [Neisseria meningitidis WUE 2594]
 gi|325139403|gb|EGC61943.1| exodeoxyribonuclease III [Neisseria meningitidis CU385]
 gi|325201128|gb|ADY96583.1| exodeoxyribonuclease III [Neisseria meningitidis H44/76]
 gi|325208932|gb|ADZ04384.1| exodeoxyribonuclease III [Neisseria meningitidis NZ-05/33]
          Length = 259

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 65/264 (24%), Positives = 120/264 (45%), Gaps = 13/264 (4%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++ + + NVN IR+        +I  +  DI+C+QE K ++ +   +       H     
Sbjct: 1   MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADLSADMKNPHGMHGHWHC 60

Query: 62  --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             ++ Y+GVA+ SK +P  +   +  ++ D + RF+   F      L + +LYLP G+  
Sbjct: 61  AEKRGYSGVAVYSKRKPDNVQIGMGIEEFDREGRFVRCDFG----RLSVISLYLPSGSSA 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +   K  ++  F             ++  GD+NI  Q  D  N    + ++ F  E 
Sbjct: 117 EERQQV-KYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEE 175

Query: 180 RQSF-QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R+   + +  +G+TD  R  +     Y++W     +++K+ G RID+ M++PE  +   S
Sbjct: 176 REWIGKVIHKLGWTDMWRTLYPDVPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVS 235

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
           A +        K SDH P++V  D
Sbjct: 236 AHVYKD----EKFSDHAPLVVEYD 255


>gi|332180233|gb|AEE15921.1| exodeoxyribonuclease III Xth [Treponema brennaborense DSM 12168]
          Length = 259

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 61/264 (23%), Positives = 100/264 (37%), Gaps = 18/264 (6%)

Query: 5   TVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS-------LNYH 56
            + +WNVN IRA        W   +  DIIC+QETK   +    E +            +
Sbjct: 3   RIISWNVNGIRAAEKKGFLQWAAYSGADIICIQETKARPEQLSSELIAPAAADGRTYKSY 62

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
             +  +  Y+G AI S  +P  +         D          T+   +    N      
Sbjct: 63  WSSAKRPGYSGTAIYSLQEPDSVELMNNPAFDDEGRVLAAKYGTLAVISAYFPNSQEAGA 122

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
                     K+ + +  L F +  ++    ++  GDYNI  +P D  NP   E +A + 
Sbjct: 123 R------LAYKLDFCRAMLAFCADLVKNGYDIVLCGDYNIAHKPIDLANPKANEGNAGYL 176

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
            E R    +    GF D  R        Y++W Y   +  KN G RID+  ++      +
Sbjct: 177 PEERAWMDEFTAAGFCDTFRKFCTDGQQYTWWSYRFHAREKNIGWRIDYQCVNEAFAGKV 236

Query: 237 HSARIDTKPRGWTKPSDHTPVIVS 260
            ++ I    +G    SDH P+++ 
Sbjct: 237 VASAILNDVQG----SDHCPIVLE 256


>gi|258545109|ref|ZP_05705343.1| exodeoxyribonuclease III [Cardiobacterium hominis ATCC 15826]
 gi|258519628|gb|EEV88487.1| exodeoxyribonuclease III [Cardiobacterium hominis ATCC 15826]
          Length = 258

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 61/262 (23%), Positives = 107/262 (40%), Gaps = 12/262 (4%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFET--LQSLNYHIET 59
           +  + T+N N IRA        W+   + D +C+QETK +      +       + H   
Sbjct: 1   MFKIITFNANGIRAAARKGFFQWLNAQDADAVCIQETKAQLPQLEGDATYFPFAHNHYHD 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GVA+  K+ P  +   +   ++D + R++EA +   +           H    
Sbjct: 61  AEKKGYSGVALYLKHPPQAVQHGIGWAEIDSEGRYLEARYPGFSLI-----SLYMHSGTS 115

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +   K +++ +   + + R    E LI  GD NI     D  N      ++ F  + 
Sbjct: 116 GEERQAKKEAFMAKLAPWLNARAAAGERLILCGDINIAHTEKDLKNWKGNLKNSGFLPQE 175

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R     L    F DA R  H     Y++W    ++ + N G RID+ ++S      + SA
Sbjct: 176 RAWLTDLFAGEFRDAFRLVHPDAEQYTWWSQRGNARANNVGWRIDYHIISQNLAGQVESA 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261
            + T        SDH P+I++ 
Sbjct: 236 SVYTD----ENFSDHAPLILTY 253


>gi|172041403|ref|YP_001801117.1| exodeoxyribonuclease III [Corynebacterium urealyticum DSM 7109]
 gi|171852707|emb|CAQ05683.1| exodeoxyribonuclease III [Corynebacterium urealyticum DSM 7109]
          Length = 271

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 78/267 (29%), Positives = 120/267 (44%), Gaps = 14/267 (5%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           +S + +ATWN+NS+R R   + A+++ ++ D++CLQETK  DK FP        Y     
Sbjct: 11  LSSMRIATWNINSVRTREDRVRAFLERSDVDVLCLQETKCTDKQFP--DFSDTGYEQAHH 68

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQ----ARFIEATFTINTQTLRIGNLYLPHG 116
           G  S+NGVAILS+    ++ T       D                    +R+ +LY+P+G
Sbjct: 69  GLHSFNGVAILSRVGLEDVQTEFGQPGFDKDLNAVQHQEARAIGALCNGVRVWSLYVPNG 128

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDAC 174
             I    Y  K++W+     +A    E          GD+NI P+  D ++   +E    
Sbjct: 129 REIRDPHYSYKLAWLDALASYAKTTGEDGTAEKLVLTGDFNIAPRDEDVWDRSWFEGKTH 188

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
            T   R+    L++ G T A          Y++WDY A  + KN+GIRID        + 
Sbjct: 189 VTPNERKRLTALEDAGLTQATELI---ADQYTYWDYQAMRFQKNEGIRIDLQYA-RGLSP 244

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261
              + R+D   R     SDH PVI+  
Sbjct: 245 --EAGRVDRDERKGKGASDHAPVIIDY 269


>gi|224372849|ref|YP_002607221.1| exodeoxyribonuclease III [Nautilia profundicola AmH]
 gi|223588651|gb|ACM92387.1| exodeoxyribonuclease III [Nautilia profundicola AmH]
          Length = 250

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 79/260 (30%), Positives = 128/260 (49%), Gaps = 12/260 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + T+NVNSIR+R+  +   IKE + D++C+QE K E+  FP        Y     GQK
Sbjct: 1   MRICTFNVNSIRSRLEIVQNLIKEYDIDVLCMQEIKVEEDKFPK---IDEEYECVIHGQK 57

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
             NGVA+ S+    +      G+  + +  +           + I N+Y+P G+      
Sbjct: 58  KLNGVAVCSRIPIEKYQKGFEGELEEARFIYSLIDE------IHIINVYVPLGDNYGER- 110

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           ++ KI +  +   F S+    ++ ++  GD N+     D ++P IWE +  F  E +   
Sbjct: 111 FEYKIYFYNKLFEFLSRFDLSKDKVVLCGDMNVAYSDLDVWDPEIWEGEVTFLPEEKAMI 170

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             + NMGF D IR  +    +Y+F+DY      KN+G+R+D++ LSP     + +  I T
Sbjct: 171 NNILNMGFVDVIREFNKNERVYTFYDYRGAKVYKNEGMRLDYVFLSPTLAKEVKNVEILT 230

Query: 244 KPRGWTK--PSDHTPVIVSL 261
             R   K  PSDH P+IV L
Sbjct: 231 SVRRKRKPTPSDHVPIIVEL 250


>gi|312890448|ref|ZP_07749985.1| exodeoxyribonuclease III Xth [Mucilaginibacter paludis DSM 18603]
 gi|311297218|gb|EFQ74350.1| exodeoxyribonuclease III Xth [Mucilaginibacter paludis DSM 18603]
          Length = 255

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 77/264 (29%), Positives = 127/264 (48%), Gaps = 13/264 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETL-QSLNY--HIET 59
           + + T+NVN IR+ +  N  +W++ ++ D++CLQE K          L + L Y  +   
Sbjct: 1   MKIITYNVNGIRSAMSKNWLSWLQASDADVVCLQEIKATPDVLTDLLLVEQLGYEHYWYP 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G AI +K  P  I       D D + R I   F      + + ++Y P G+  
Sbjct: 61  AEKKGYSGTAIFTKQTPKHIEYGCGISDFDREGRNIRVDFD----DVSVMSVYFPSGS-S 115

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              + D K  ++  F  + ++       L+ +GDYNI  +P D +NP    N + F    
Sbjct: 116 GDERQDFKFRFLDEFGEYINKLKWAYPNLVISGDYNICHRPIDIHNPKSNANSSGFLPAE 175

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R+  + L   GF D  R  +   H Y++W + A+S +KN G RID+ M +     L+  A
Sbjct: 176 REWMENLIESGFVDTFRYLNKEPHNYTWWSFRANSRAKNLGWRIDYNMATQPLQPLIKRA 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
            I ++ R     SDH PV++ LD+
Sbjct: 236 AILSEAR----HSDHCPVLLELDL 255


>gi|304407353|ref|ZP_07389006.1| exodeoxyribonuclease III Xth [Paenibacillus curdlanolyticus YK9]
 gi|304343794|gb|EFM09635.1| exodeoxyribonuclease III Xth [Paenibacillus curdlanolyticus YK9]
          Length = 255

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 63/261 (24%), Positives = 101/261 (38%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      +  E++ DI CLQETK +            + +     +
Sbjct: 1   MKLISWNVNGLRACVTKGFMDYFNESDADIFCLQETKLQAGQIELPLEGRYSQYWNYAVK 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G A+ +K +P+ +   +  D  D                +   N            
Sbjct: 61  KGYSGTAVFTKVEPLTVRYGIEEDSEDEGRILTLEFDRFYLVNVYTPNAKRDLSRLG--- 117

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +   R     L+ ++P+I  GD N+  Q  D  N      ++ FT E R  
Sbjct: 118 ----YRLEWEDRFRAYLLELDAQKPVIVCGDLNVAHQEIDLKNAKSNHGNSGFTTEERGK 173

Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
              L   GF D  R  H      +S+W +      +N G RID+ + S      +  A I
Sbjct: 174 MTDLLESGFIDTFRHLHPERDDAFSWWSFMPKVRERNIGWRIDYFLASARLAPHVTDAGI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
           D+   G    SDH PV+V L+
Sbjct: 234 DSAILG----SDHCPVMVQLE 250


>gi|302543032|ref|ZP_07295374.1| exodeoxyribonuclease III [Streptomyces hygroscopicus ATCC 53653]
 gi|302460650|gb|EFL23743.1| exodeoxyribonuclease III [Streptomyces himastatinicus ATCC 53653]
          Length = 273

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 54/264 (20%), Positives = 95/264 (35%), Gaps = 6/264 (2%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           V++V T NVN +RA        W+     D++CLQE + E +  P    +   +H+    
Sbjct: 7   VLSVTTVNVNGLRAAAKKGFVPWLDGTAADVVCLQEVRAEPRELPEAVREPDGWHVVHAP 66

Query: 62  Q--KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
              K   GV++ ++ +   +       + D   R++E      T    +       G   
Sbjct: 67  AAAKGRAGVSVYARRELEAVRVGFGSSEFDDSGRYVEVDLPGVTVG-SLYLPSGEVGTER 125

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K      ++        +        +  GD+NI  Q  D  N       + F  E 
Sbjct: 126 QDEKERFTAEFLPYLKELRERAAADGREALVCGDWNIAHQEADLKNWKANRKKSGFLPEE 185

Query: 180 RQSFQKLQNMGFTDAIRA--THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
           R    ++        +      D    YS+W Y   ++  + G RID+ + +P       
Sbjct: 186 RAWLSRVFEEAAYVDVVRALHPDVDGPYSWWSYRGRAFDNDAGWRIDYQVATPGLAGRAL 245

Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261
            A ++  P    + SDH PV V+ 
Sbjct: 246 KAVVERAPAYDQRWSDHAPVTVTY 269


>gi|229086305|ref|ZP_04218483.1| Exodeoxyribonuclease [Bacillus cereus Rock3-44]
 gi|228697000|gb|EEL49807.1| Exodeoxyribonuclease [Bacillus cereus Rock3-44]
          Length = 252

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 64/263 (24%), Positives = 121/263 (46%), Gaps = 14/263 (5%)

Query: 4   VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           +   +WNVN +RA         +++E + DI CLQE K +         +    +     
Sbjct: 1   MKFISWNVNGLRAVIAKGGFIEYLEETDTDIFCLQEIKLQSGQVDLNP-EGYYVYWNYAV 59

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G AIL+K +P+ +   L  ++ D + R I   F  +   L +       G     
Sbjct: 60  KKGYSGTAILTKKEPLSVTYGLGIEEHDQEGRLITLEFE-DFYMLTLYTPNAKRGLERLD 118

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            +        +  +     +L+ ++P+IF GD N+  +  D  NP     +  F+ + R+
Sbjct: 119 YR-----MKWEEDILSYITKLDKKKPVIFCGDLNVAHKEIDLKNPKTNRKNPGFSDQERK 173

Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            F ++ + GF D  R  +      YS+W Y  ++ +KN G R+D+ ++S      +  A+
Sbjct: 174 RFTQILDEGFIDTYRYLYPDREGAYSWWSYRMNARAKNIGWRLDYFIVSERLKDKIVDAK 233

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263
           I+++  G    SDH PV +++++
Sbjct: 234 INSEVMG----SDHCPVELNMEL 252


>gi|261380655|ref|ZP_05985228.1| exodeoxyribonuclease III [Neisseria subflava NJ9703]
 gi|284796637|gb|EFC51984.1| exodeoxyribonuclease III [Neisseria subflava NJ9703]
          Length = 259

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 65/264 (24%), Positives = 120/264 (45%), Gaps = 13/264 (4%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++ + + NVN IR+        +I  +  DI+C+QE K ++ +   +       H     
Sbjct: 1   MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADLSDDMKNPHGMHGYWHC 60

Query: 62  --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             ++ Y+GVA+ SK +P  +   +  ++ D + RF+   F      L + +LYLP G+  
Sbjct: 61  AEKRGYSGVAVYSKRKPDNVQIGMGVEEFDREGRFVRCDFG----KLSVISLYLPSGSSA 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +   K  ++  F             ++  GD+NI  Q  D  N    + ++ F  E 
Sbjct: 117 EERQQV-KYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEE 175

Query: 180 RQSF-QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R+   + +  +G+TD  R  +     Y++W     +++K+ G RID+ M++PE  +   S
Sbjct: 176 REWIGKVIHKLGWTDMWRTLYPDVPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVS 235

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
           A +        K SDH P++V  D
Sbjct: 236 AHVYKD----EKFSDHAPLVVEYD 255


>gi|154148197|ref|YP_001407152.1| exodeoxyribonuclease III [Campylobacter hominis ATCC BAA-381]
 gi|153804206|gb|ABS51213.1| exodeoxyribonuclease III [Campylobacter hominis ATCC BAA-381]
          Length = 251

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 62/264 (23%), Positives = 108/264 (40%), Gaps = 17/264 (6%)

Query: 4   VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH---IET 59
           + + +WNVN +RA + N    WI +  PD + LQE K  +   P E   +L +    + +
Sbjct: 1   MKLISWNVNGLRACVKNDALGWITQEKPDFLALQEIKVSEDKIPSEIY-NLGFENLDVNS 59

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +  Y+GVA L   +          ++     +      ++                  
Sbjct: 60  GEKAGYSGVASLHNLKCATFKNLFFQENEGRVLQHDFNEISLFNIYF--------PNGQK 111

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              + + K+ +  +FL +  +  +    +I  GD N   +  D  NP    + + F    
Sbjct: 112 DENRLNFKMEFYDKFLIYLDKLKKQGRKIIICGDVNTAHREIDLKNPKSNSDRSGFLPIE 171

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R    KL + GF D  RA +     YS+W Y  ++ +KN G RID+  +S +    L +A
Sbjct: 172 RAWIDKLLSHGFVDTFRAINGDKIAYSWWSYRFNARAKNAGWRIDYFFISEDLRENLTNA 231

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
            I        K SDH PV + +++
Sbjct: 232 FILDDI----KGSDHCPVGIEINL 251


>gi|238928084|ref|ZP_04659844.1| exodeoxyribonuclease III Xth [Selenomonas flueggei ATCC 43531]
 gi|238884044|gb|EEQ47682.1| exodeoxyribonuclease III Xth [Selenomonas flueggei ATCC 43531]
          Length = 250

 Score =  176 bits (447), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 65/261 (24%), Positives = 105/261 (40%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +        +E + D  CLQETK ++     + L     +  +  +
Sbjct: 1   MRFVSWNVNGLRAALKKGFMESFRELDADAFCLQETKMQEGQAILD-LPGYEQYFYSAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI ++ +P+ +   +     D + R I   F                   +   
Sbjct: 60  KGYSGTAIFTRVKPLSVAYGIGISAHDNEGRVITMEFDDVYLVTVYTPNAKRALERLDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +   R     L  ++P++  GD N+     D  NP     +A FT E R  
Sbjct: 120 M------MWEDAFRAFLLGLRAKKPVVVCGDLNVAHTEIDLKNPKSNRRNAGFTDEERGK 173

Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L   GF D  RA +      Y++W Y   +   N G RID+ ++S E    + +A I
Sbjct: 174 FTELLQAGFIDTFRALYPDRTGAYTWWSYLRHARETNAGWRIDYFLVSAELRDRIAAAEI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
                G    SDH PV ++L 
Sbjct: 234 HADIFG----SDHCPVSLTLK 250


>gi|312843088|gb|ADR02759.1| XthA [Treponema pallidum subsp. pertenue]
 gi|313505178|gb|ADR64329.1| exodeoxyribonuclease III [Treponema pallidum subsp. pertenue]
 gi|313505198|gb|ADR64348.1| exodeoxyribonuclease III [Treponema pallidum subsp. pertenue str.
           Gauthier]
 gi|313505297|gb|ADR64434.1| exodeoxyribonuclease III [Treponema pallidum]
          Length = 264

 Score =  176 bits (447), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 57/267 (21%), Positives = 100/267 (37%), Gaps = 20/267 (7%)

Query: 5   TVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS---------LN 54
            + +WNVN IRA    +  +W+    PD++CLQE K  +                     
Sbjct: 6   RIISWNVNGIRAIERKDFLSWLAREAPDVLCLQEIKAHESQLSAALRAPVWSAGAGGTYY 65

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
            +  +  +  Y+G A+ SK  P  +                     +   +    N    
Sbjct: 66  TYFHSAQRPGYSGTALFSKRAPDAVRFFGVPAFDCEGRMLAARFGELTVVSAYFPNAQ-- 123

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
                   +   K+ +   F  F  +     + +I  GDYNI  +  D  +P   E +  
Sbjct: 124 ----EGGKRLAYKLDFCAAFRAFCDEERTAGQHVILCGDYNIAHKEIDLAHPQENEGNPG 179

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
           F  + R         G+ D+ RA       Y++W Y A + ++N G RID+  +     +
Sbjct: 180 FLPQERAWMDTFTEAGYADSFRAFCTEGQQYTWWSYRARARARNIGWRIDYQCVDQAFLA 239

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261
            + S++I ++  G    SDH PV ++ 
Sbjct: 240 RVTSSQILSEVTG----SDHCPVCLTY 262


>gi|149184981|ref|ZP_01863298.1| exonuclease III [Erythrobacter sp. SD-21]
 gi|148831092|gb|EDL49526.1| exonuclease III [Erythrobacter sp. SD-21]
          Length = 263

 Score =  176 bits (447), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 76/265 (28%), Positives = 118/265 (44%), Gaps = 6/265 (2%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCG 61
           +V+VATWN+NS+R R+  +  ++KE  PD++CLQE K ++  FP+E  ++L Y HI   G
Sbjct: 1   MVSVATWNINSVRLRMPIVERFLKETAPDVLCLQEIKCQEHQFPYEAFKALGYEHIAVHG 60

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           QK Y+GVA +S+    E   H      + +AR +      +   +         G+    
Sbjct: 61  QKGYHGVATVSRVPIREFSRH--DWQDNGEARHVGVELPEHDGMIVENVYVPAGGDEPDR 118

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
                    +    R       ++ P +  GD+NI P   D +N          T    +
Sbjct: 119 EINVKFGQKLDFLERMTRWADAVDRPTLIVGDFNIAPLESDVWNHKQLLKVVSHTPIEVE 178

Query: 182 SFQKLQNMGFTDAIRATH--DTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLLHS 238
           S Q+  +      I   H       YS+W Y A  W + ++G R+DH+  SPE       
Sbjct: 179 SLQRFMDAHGWADIGREHIKAPERYYSWWSYRAKDWKANDRGRRLDHMWASPELAKQASG 238

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263
             +    R W KPSDH P++   DI
Sbjct: 239 HSVHEYARDWEKPSDHVPLVTEFDI 263


>gi|126738695|ref|ZP_01754400.1| exodeoxyribonuclease III, putative [Roseobacter sp. SK209-2-6]
 gi|126720494|gb|EBA17200.1| exodeoxyribonuclease III, putative [Roseobacter sp. SK209-2-6]
          Length = 276

 Score =  176 bits (447), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 85/264 (32%), Positives = 121/264 (45%), Gaps = 10/264 (3%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQK 63
           T+ATWN+NS+R R   +   ++E  PD++CLQE K+  +  P E   SL Y H+   GQK
Sbjct: 18  TLATWNINSVRLREDLVLKLLQEEAPDVLCLQECKSPVEKIPTEGFASLGYHHMVARGQK 77

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            YNGVAILSK    ++      +    +    E         + I N Y+P G      +
Sbjct: 78  GYNGVAILSKLPLKDVGDKDFANLGHARHVAAELENG-----VTIQNFYVPAGGDKPDRE 132

Query: 124 YDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180
            ++K      +L         E P      GD NI P+  D ++          T  EV 
Sbjct: 133 VNEKFGQKLDYLTEMRDWFRSEAPKKSILVGDLNIAPREEDVWDHKKMLKVVSHTPIEVE 192

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHSA 239
              +  +  G+ D  RA      LYS+W Y A  W   +KG R+DH+  + + +    S+
Sbjct: 193 HLAEVQEAGGWQDVTRADIPDGLLYSWWSYRAKDWDAADKGRRLDHVWATGDISQSASSS 252

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
           RI    RGW KPSDH PV  S D+
Sbjct: 253 RILRAARGWEKPSDHAPVFASFDL 276


>gi|91774073|ref|YP_566765.1| exodeoxyribonuclease III [Methanococcoides burtonii DSM 6242]
 gi|91713088|gb|ABE53015.1| Exodeoxyribonuclease III [Methanococcoides burtonii DSM 6242]
          Length = 251

 Score =  176 bits (447), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 63/259 (24%), Positives = 109/259 (42%), Gaps = 12/259 (4%)

Query: 12  NSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETCGQKSYNGV 68
           N +R+ +      W++   PDI+CLQETK  +   P E      Y  +  +  +K Y+GV
Sbjct: 2   NGLRSMLKKGFVEWMEATQPDILCLQETKATETQLPKELRHIHGYVPYFFSAERKGYSGV 61

Query: 69  AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKI 128
            I +K  P+E+   L     D + R    T  +  +   + N+Y P+G        + K+
Sbjct: 62  GIYTKVPPVEVKYGLGVPRFDKEGR----TLIVEFEDFALFNIYFPNGKASDER-LEYKM 116

Query: 129 SWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN 188
            +   F+  A    +  + +I  GD N   +  D   P   E  + F  + R+       
Sbjct: 117 DFYNAFMEVADSMKDAGKNVIICGDVNTAHKEIDLARPKQNERSSGFLPQEREWIDTFLG 176

Query: 189 MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGW 248
            G+ D +R        Y++WD    +  +N G RID+   S      + SA I +   G 
Sbjct: 177 HGYLDTLRMFEPESGNYTWWDMKTRARDRNVGWRIDYFFASVSLKDRIRSAYILSDVMG- 235

Query: 249 TKPSDHTPVIVSLDIPEPR 267
              SDH P+ + +++ +  
Sbjct: 236 ---SDHCPIGIEVELGDSS 251


>gi|73539900|ref|YP_294420.1| AP endonuclease [Ralstonia eutropha JMP134]
 gi|72117313|gb|AAZ59576.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Ralstonia
           eutropha JMP134]
          Length = 258

 Score =  176 bits (447), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 60/266 (22%), Positives = 117/266 (43%), Gaps = 13/266 (4%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IET 59
           ++ + + N+N IR+        W+ + + D++C+QE K +  +     L    YH     
Sbjct: 1   MLRIISANLNGIRSASKKGFFEWMGKQDADMVCVQELKAQAADMTEAFLAPHGYHGYFHY 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GV + ++++P  ++T     + D + R++E    +    L + ++Y+P G+  
Sbjct: 61  AEKKGYSGVGLYTRHKPERVITGFGNPEFDSEGRYVE----VQYPHLAVISVYVPSGSSS 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +   K  +++ FL    Q       ++  GD NI  +  D  N      ++ F  E 
Sbjct: 117 EERQQA-KFRFMEAFLPHLLQLKASGREIVLCGDVNIAHKEIDIKNWKGNLKNSGFLPEE 175

Query: 180 RQSFQKLQNMG-FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R    +L +M  + D  R        Y++W     +++KN G RID+ + +P+     H 
Sbjct: 176 RAWIGQLFDMHGYVDVFRQLDPRPEQYTWWSNRGQAYAKNVGWRIDYHLATPKIAGTAHV 235

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIP 264
             I        K SDH P+ +  + P
Sbjct: 236 CSIYKD----EKFSDHAPLSIDYNYP 257


>gi|261840198|gb|ACX99963.1| exodeoxyribonuclease [Helicobacter pylori 52]
          Length = 250

 Score =  176 bits (447), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 69/260 (26%), Positives = 115/260 (44%), Gaps = 13/260 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      +    + D+ C+QE+K + +   FE  +          +
Sbjct: 1   MKLISWNVNGLRACMTKGFMDFFNSVDADVFCIQESKMQQEQNIFE-FKGYFDFWNCAIK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+GV   +K +P+ +   +  D+ D + R +   F     +  + N+Y P+     S 
Sbjct: 60  KGYSGVVTFTKKEPLSVSYGINIDEHDKEGRVVTCEFE----SFYLVNVYTPNSQQALSR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                   ++   R   + LEL++P+I  GD N+     D  NP     +A F+ E R  
Sbjct: 116 LSYRMSWEVE--FRKFLKALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEERGK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L N GF D  R  +      Y++W Y   +  K+ G RID+ + S    + L  A I
Sbjct: 174 FNELLNAGFIDTFRYFYPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALI 233

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
                G    SDH PV + L
Sbjct: 234 YKDILG----SDHCPVGLEL 249


>gi|315637812|ref|ZP_07893002.1| exodeoxyribonuclease III [Campylobacter upsaliensis JV21]
 gi|315482053|gb|EFU72667.1| exodeoxyribonuclease III [Campylobacter upsaliensis JV21]
          Length = 252

 Score =  176 bits (446), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 63/262 (24%), Positives = 99/262 (37%), Gaps = 12/262 (4%)

Query: 4   VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WN+N +RA        W++E   D I  QE K  +  FP +  +    H+     
Sbjct: 1   MKLLSWNINGLRAICDKGGLEWLREEKIDFIGFQEIKASEDKFPKKIYEFPFKHMYFNSA 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K      ++S              D D           I    +   N            
Sbjct: 61  KRAGYSGVMSLCNFESETKKCEFFDDDEGRVLEHRFNNIVLFNIYFPN------GQKDEI 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           + + K+ +   FL + ++ L+  + +I  GD N   +  D  +P    N + F    R  
Sbjct: 115 RLNHKMKFYADFLVYLNKLLKEGKEVIICGDVNTAHKEIDLTHPKANANTSGFLPIERAW 174

Query: 183 FQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
              L  +GF D  R  + D    YS+W Y   +  +N G RID+  +S    S L +A I
Sbjct: 175 IDDLLALGFIDTFREINGDIKEKYSWWSYRMKARERNVGWRIDYFFISKGLKSKLKNAFI 234

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
                G    SDH PV + LDI
Sbjct: 235 KDDIFG----SDHAPVGIELDI 252


>gi|300782769|ref|YP_003763060.1| exodeoxyribonuclease III [Amycolatopsis mediterranei U32]
 gi|299792283|gb|ADJ42658.1| exodeoxyribonuclease III [Amycolatopsis mediterranei U32]
          Length = 278

 Score =  176 bits (446), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 57/280 (20%), Positives = 104/280 (37%), Gaps = 14/280 (5%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           V+TV+T NVN +RA        W+     D++  QE + E    P   +    +      
Sbjct: 4   VLTVSTVNVNGLRAAAKKGFVEWLAATKADVVACQEVRAEASQLPAAVVGPDGWFSVHAP 63

Query: 62  --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
              K  NGVA+ S+ +P E+       + +   R++E           +          +
Sbjct: 64  SAVKGRNGVAVYSRVEPEEVRIGFGEPEFEDSGRYLEVHLPN-----VVVASLYLPSGDV 118

Query: 120 TSTKYDDKISWIKRFLRF----ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
            + + D+K  ++  FL +     ++        +  GD+NI     D  N      ++ F
Sbjct: 119 GTERQDEKERFMAAFLPYLAELRAKAAAAGREAVVVGDWNIAYDTVDLKNWRGNRKNSGF 178

Query: 176 TLEVRQS--FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
             E R        +        R   +    Y++W Y   ++  + G RID  + +P   
Sbjct: 179 LPEERAWLGRVYTEAGYTDVQRRLDPEGPGPYTWWSYRGQAFDNDSGWRIDCQLATPGLA 238

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDS 273
             +    ++       + SDH PV  + DI  PR+  Q+ 
Sbjct: 239 EKVVDVVVERAAAYDQRWSDHAPVTATYDIDFPREPAQEV 278


>gi|163739851|ref|ZP_02147258.1| exodeoxyribonuclease III [Phaeobacter gallaeciensis BS107]
 gi|163743404|ref|ZP_02150784.1| exodeoxyribonuclease III, putative [Phaeobacter gallaeciensis 2.10]
 gi|161383398|gb|EDQ07787.1| exodeoxyribonuclease III, putative [Phaeobacter gallaeciensis 2.10]
 gi|161386885|gb|EDQ11247.1| exodeoxyribonuclease III [Phaeobacter gallaeciensis BS107]
          Length = 262

 Score =  176 bits (446), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 85/268 (31%), Positives = 120/268 (44%), Gaps = 11/268 (4%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIET 59
           MS  T+ATWN+NS+R R   +   + E  PD++CLQE K+     P E    L Y H+  
Sbjct: 1   MS-FTLATWNINSVRLREPIVCKLLAEEGPDVLCLQECKSPVDKIPMEQFAELGYGHMVA 59

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            GQK YNGVAILS+    ++      D    +              + I N Y+P G  +
Sbjct: 60  RGQKGYNGVAILSRLPIEDVGDKDFADLGHARHIAGRLENG-----VTIHNFYVPAGGDV 114

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL 177
                ++K      +L         E P      GD NI P+  D ++          T 
Sbjct: 115 PDRAVNEKFGQKLDYLTDMRDWFNAERPEKSILVGDLNIAPREDDVWDHKKLLKVVSHTP 174

Query: 178 -EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSL 235
            EV      +   G++D  R       LYS+W Y A  W   +KG R+DHI  +P+  + 
Sbjct: 175 IEVEHFADVMDAGGWSDVTRNDIPDGQLYSWWSYRAKDWDAADKGRRLDHIWATPDIKNA 234

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            HS+R+    RGW KPSDH PV  + D+
Sbjct: 235 AHSSRVMRDARGWEKPSDHAPVFATFDL 262


>gi|56698248|ref|YP_168621.1| exodeoxyribonuclease III, putative [Ruegeria pomeroyi DSS-3]
 gi|56679985|gb|AAV96651.1| exodeoxyribonuclease III, putative [Ruegeria pomeroyi DSS-3]
          Length = 262

 Score =  176 bits (446), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 84/264 (31%), Positives = 119/264 (45%), Gaps = 10/264 (3%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQK 63
           T+ATWN+NS+R R   +   + E  PDI+CLQE K+     P E    L Y H+   GQK
Sbjct: 4   TLATWNINSVRLREPIVCKLLAEEGPDILCLQEIKSPVDKMPVEGFADLGYRHVVAHGQK 63

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            YNGVAILS+    E+           +              + I N Y+P G  +   +
Sbjct: 64  GYNGVAILSRLPIEEVGREDFATLGHARHVAARLENG-----VTIHNFYVPAGGDVPDRE 118

Query: 124 YDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180
            ++K      +L           P      GD NI P+  D +N          T  EV 
Sbjct: 119 VNEKFGQKLDYLTEMRDWFHANAPEKSILVGDLNIAPREDDVWNHKQLLKIVSHTPIEVD 178

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLLHSA 239
              Q + +  + D  R       LYS+W Y A  W + +KG R+DH+  +P+ ++  HS+
Sbjct: 179 HLGQVMDSGKWVDITRQDIPQGLLYSWWSYRAKDWSAADKGRRLDHVWATPDISNAGHSS 238

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
           RI    RGW +PSDH PV  S D+
Sbjct: 239 RILRDARGWEQPSDHAPVFASFDL 262


>gi|118375590|ref|XP_001020979.1| exodeoxyribonuclease III family protein [Tetrahymena thermophila]
 gi|89302746|gb|EAS00734.1| exodeoxyribonuclease III family protein [Tetrahymena thermophila
           SB210]
          Length = 396

 Score =  176 bits (446), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 75/280 (26%), Positives = 124/280 (44%), Gaps = 18/280 (6%)

Query: 4   VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSL---NYHIE 58
           + +A WNVN +RA +    L  +IK+ NPDI+CL ETK ++ NF  E +       Y+  
Sbjct: 117 IKIACWNVNGLRAVLKREDLQKYIKQENPDILCLNETKIDESNFIKEKVYKDIPSGYYQY 176

Query: 59  TCGQKS----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
                     Y+GV+I SK + I I   +   + + + R + A F      +        
Sbjct: 177 WNFCIPPIKGYSGVSIFSKEKVISIKKGIDIAEHENEGRVLTAEFDKFYLVVVYVPNAGS 236

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
                   + D +++   +  +    +L+L++ +I  GD N+  Q  D  NP    N   
Sbjct: 237 E-----LVRLDYRVNSFDKDFQNYLNQLKLKKNVILCGDLNVAHQEIDIANPKSNRNSPG 291

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
           FT+E R SF K    G+ D  R  +     YS+W     +   N G RID+ +++ E  S
Sbjct: 292 FTIEERNSFSKFLESGWIDTFRFLYPETIKYSWWSVRTKARESNIGWRIDYFVVNKEFKS 351

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDST 274
            +  + I+    G    SDH PV   L++   ++ +  S 
Sbjct: 352 SIKDSMINNNIYG----SDHCPVEFILNLDAIQQNETSSN 387


>gi|256828507|ref|YP_003157235.1| exodeoxyribonuclease III Xth [Desulfomicrobium baculatum DSM 4028]
 gi|256577683|gb|ACU88819.1| exodeoxyribonuclease III Xth [Desulfomicrobium baculatum DSM 4028]
          Length = 257

 Score =  176 bits (446), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 72/267 (26%), Positives = 114/267 (42%), Gaps = 16/267 (5%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC- 60
           ++ + +WNVN  RA +      W++   PD++ LQE K E+     + L    YH     
Sbjct: 2   ILRMHSWNVNGFRAVLGKGFRDWLERAAPDVLGLQEVKAEEGQVGGDRLFD-GYHCYWNA 60

Query: 61  --GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
              +K Y+G A  S+ +P+ +   LP      + R I   F          N+Y P+G  
Sbjct: 61  ARSKKGYSGTACYSRLEPLAVQRGLPDTRFQGEGRVIRLEFE----KFHYFNVYFPNGQM 116

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
                  D            +Q L  ++P++  GD+N   +  D  N    E  + F   
Sbjct: 117 SPDRL--DYKLGFYDAFLAYAQELRRDKPIVVCGDFNTAHREIDLKNAKANEKTSGFLPI 174

Query: 179 VRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
            R    +    G+ D  R  H D    YS+W Y   + S+N G RID+  +S E +S + 
Sbjct: 175 ERAWMDRFVAHGYVDTFRRCHGDVEDAYSWWTYRFGARSRNVGWRIDYFFVSEELSSAVR 234

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDIP 264
            A I+    G    SDH PV ++L++P
Sbjct: 235 DAWIEADVPG----SDHCPVGLALELP 257


>gi|99079894|ref|YP_612048.1| exodeoxyribonuclease III [Ruegeria sp. TM1040]
 gi|99036174|gb|ABF62786.1| exodeoxyribonuclease III [Ruegeria sp. TM1040]
          Length = 262

 Score =  176 bits (446), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 87/268 (32%), Positives = 122/268 (45%), Gaps = 11/268 (4%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIET 59
           MS  T+ATWN+NS+R R   +   ++E  PD++CLQE K+     P E  ++L Y H+  
Sbjct: 1   MS-FTLATWNINSVRLREPIVVKLLEEEGPDVLCLQECKSPVDKIPMEAFRALGYEHMIA 59

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            GQK YNGVAILS+    ++     GD                   + I N Y+P G   
Sbjct: 60  RGQKGYNGVAILSRLPIEDV-----GDKDFASLGHARHVAGRLENGVTIHNFYVPAGGDE 114

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL 177
              + + K      +L         E P      GD NI P+  D ++          T 
Sbjct: 115 PDREKNVKFGQKLDYLTEMRDWFHAERPEKSVLVGDLNIAPREDDVWDHKKLLKVVSHTP 174

Query: 178 -EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSL 235
            EV    Q +   G+ D  R       LYS+W Y A  W   +KG R+DH+  + + T+ 
Sbjct: 175 IEVEHLDQVMDAGGWADVTRKDIPEGQLYSWWSYRAKDWDAADKGRRLDHVWTTADITNA 234

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            HS+RI    RGW KPSDH PV  + D+
Sbjct: 235 AHSSRILRHARGWEKPSDHAPVFATFDL 262


>gi|83941780|ref|ZP_00954242.1| exodeoxyribonuclease III, putative [Sulfitobacter sp. EE-36]
 gi|83847600|gb|EAP85475.1| exodeoxyribonuclease III, putative [Sulfitobacter sp. EE-36]
          Length = 262

 Score =  176 bits (446), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 80/264 (30%), Positives = 119/264 (45%), Gaps = 10/264 (3%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQK 63
           T+ATWN+NS+R R   +   + E+ PD++CLQE K+     P        Y H+   GQK
Sbjct: 4   TLATWNINSVRLREPIVLKLLAEHGPDVLCLQECKSPVDKIPTAAFIEAGYTHMVARGQK 63

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            YNGVAILS+   +       GD                   + + N Y+P G  +   +
Sbjct: 64  GYNGVAILSRLPLV-----DAGDQDFATLGHARHIAAKLENGVTVHNFYVPAGGDVPDRE 118

Query: 124 YDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180
            ++K      +L         ++P      GD NI P+  D ++          T  EV 
Sbjct: 119 VNEKFGQKLDYLADMRDWFHGDKPEKSILVGDLNIAPREDDVWDHKKLLKVVSHTPIEVE 178

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHSA 239
           +  +     GF D  R      +LYS+W Y A  W   +KG R+DH+  +P+ +   HS+
Sbjct: 179 KLAETQDAGGFVDVTRQDIPQGNLYSWWSYRAKDWDAADKGRRLDHVWATPDISGAAHSS 238

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
           R+    RGW KPSDH PV  + D+
Sbjct: 239 RVLRDARGWEKPSDHAPVFATFDL 262


>gi|323342310|ref|ZP_08082542.1| exodeoxyribonuclease III [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322463422|gb|EFY08616.1| exodeoxyribonuclease III [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 252

 Score =  176 bits (446), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 62/262 (23%), Positives = 118/262 (45%), Gaps = 13/262 (4%)

Query: 3   VVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++ + +WNVN +RA +        +  + D++CLQETK +     ++  +    +     
Sbjct: 1   MMKLISWNVNGLRAVMKKDFEGIFEAMDTDVLCLQETKMQAGQLDYDP-EGYYAYYNYAE 59

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G A+ ++ +P+ +   +  D+ + + R I   +              P    I  
Sbjct: 60  KKGYSGTAVYTRIKPLNVTYGIQEDEHNTEGRVITCEYDDFFLVCVYTPNSQPELKRIDY 119

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
                     +   R   + L+  +P++  GD N+  +  D  NP     +  F+ + R+
Sbjct: 120 RMQ------WEDDFREYLKMLDETKPVVLCGDLNVAHKEIDLKNPSANRKNPGFSDQERE 173

Query: 182 SFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            F  L + GF D+ R  H      YS+W Y A++ S+N G RID+ ++S    + + +A 
Sbjct: 174 QFTNLLDAGFIDSFRELHPNAIDRYSWWSYRANARSRNTGWRIDYFVVSERLRNAIEAAD 233

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I  +  G    SDH PV++ L+
Sbjct: 234 ILDQVLG----SDHCPVMIKLN 251


>gi|29653648|ref|NP_819340.1| exodeoxyribonuclease III [Coxiella burnetii RSA 493]
 gi|29540910|gb|AAO89854.1| exodeoxyribonuclease III [Coxiella burnetii RSA 493]
          Length = 259

 Score =  176 bits (446), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 63/263 (23%), Positives = 109/263 (41%), Gaps = 13/263 (4%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + T N+N IRA        W+K    DI+CLQETK   +    +      YH      
Sbjct: 1   MRIITLNLNGIRAAARRGFFDWLKRQKADIVCLQETKACLEITNGDQFHPKGYHCYYHDA 60

Query: 63  KS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           +   Y+GV I  + +P  + T L  +  D + R+I+A F   +                 
Sbjct: 61  EKSGYSGVGIYCREKPDRVTTRLGWEHADKEGRYIQADFGSLSV-----ASLYMPSGTTG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   K  ++ R+++     +  +   I  GD+NI+ +  D  N    +  +    E R
Sbjct: 116 EHRQKIKFDFMDRYMKRLKNIVHSKRSFIICGDWNIVHKEIDIKNFKSNQKYSGCLPEER 175

Query: 181 QS-FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
               +    +G  DA R  +     Y++W     +W KN G RID+ +++ +  + + S 
Sbjct: 176 AWLDEVFTKVGLVDAFRVVNQKPDQYTWWSSRGRAWEKNVGWRIDYQVITSDLKNSVKSE 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
           RI    R     SDH P+I+  +
Sbjct: 236 RIYKDKR----FSDHAPLIIDYE 254


>gi|295698348|ref|YP_003603003.1| exodeoxyribonuclease III [Candidatus Riesia pediculicola USDA]
 gi|291157399|gb|ADD79844.1| exodeoxyribonuclease III [Candidatus Riesia pediculicola USDA]
          Length = 267

 Score =  176 bits (446), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 77/268 (28%), Positives = 130/268 (48%), Gaps = 9/268 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N IRA  H L   +K+ +PDII LQETK E+  FP +      YHI   G+K
Sbjct: 1   MKIVSFNINGIRAHFHQLYEIVKKYDPDIIGLQETKVENSLFPKDGF-DHKYHIYLNGRK 59

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           S++GVA+ SK +  +I      ++ + + R I A        ++I N+Y P G    +  
Sbjct: 60  SHHGVALFSKKKLFDINIRFFKENSNEEHRVISANIFFQETEIQIINIYCPQGENRNNKI 119

Query: 124 YDDKISWIKRF-LRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACFT 176
             +K     +  +++  +++   + +I  GD NI P+  D        N  I      F 
Sbjct: 120 KFNKKKNFYKNLIKYVQKKIFENKNIILMGDMNISPEDQDIGIDPYHQNRWINLGKCGFL 179

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHH-LYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R   +KL++ G  D  R  +      +S++DY ++ +    G+RID I++S +    
Sbjct: 180 PEERIWMKKLKSFGLIDTYRKRNFFKKNKFSWFDYRSNGFLNKVGLRIDFILVSKKLFDS 239

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             S+ ID   R   +PSDH P+    +I
Sbjct: 240 CRSSGIDYSIRSMKRPSDHAPIWAFFEI 267


>gi|298293365|ref|YP_003695304.1| exodeoxyribonuclease III [Starkeya novella DSM 506]
 gi|296929876|gb|ADH90685.1| exodeoxyribonuclease III [Starkeya novella DSM 506]
          Length = 272

 Score =  176 bits (446), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 84/270 (31%), Positives = 119/270 (44%), Gaps = 10/270 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62
           +T+ATWN+NS+R RI  +     E  PD+ICLQETKT D  FP +      Y H    GQ
Sbjct: 3   LTIATWNINSVRLRIGLVEKLAAEYQPDVICLQETKTPDDRFPLKDAAKFGYPHAAIHGQ 62

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIE-ATFTINTQTLRIGNLYLPHGNPITS 121
           K Y+GVAILSK    ++      D  D +   +           L I N Y+P G  I  
Sbjct: 63  KGYHGVAILSKRPFDQVSRQGFCDIGDARHICVTLGREAGLEAPLTIHNFYIPAGGDIPD 122

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIF-----AGDYNIIPQPHDCYNPIIWENDACFT 176
              ++K      FL  A+   +L            GD NI P   D ++     +    T
Sbjct: 123 PALNEKFRHKLAFLDEATMWEQLHPEDPTARSVLVGDLNIAPLETDVWSHKQLLDVVSHT 182

Query: 177 LEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEAT 233
               +  +KLQ  G    +          LY++W Y A  W   N+G R+DH+  +P   
Sbjct: 183 PIEVEKLEKLQAAGRWVDVMRNFVPPDERLYTWWSYRAADWEASNRGRRLDHVWATPAFA 242

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
               +  +    R W +PSDH PV+V+ D+
Sbjct: 243 PTARAMNVVRAARSWERPSDHVPVVVTFDV 272


>gi|284047996|ref|YP_003398335.1| exodeoxyribonuclease III [Acidaminococcus fermentans DSM 20731]
 gi|283952217|gb|ADB47020.1| exodeoxyribonuclease III [Acidaminococcus fermentans DSM 20731]
          Length = 250

 Score =  176 bits (446), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 69/259 (26%), Positives = 120/259 (46%), Gaps = 13/259 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + TWNVN +RA +    A ++     DI+C+QETK + +   F+     + +  +  +
Sbjct: 1   MKLITWNVNGLRACMNKGFADFMTAAGADIVCVQETKMQREQASFD-FPGYHEYWNSAVK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G A+ SK +P+ +   L  ++ D + R I A +        + N+Y P+     + 
Sbjct: 60  KGYSGTAVFSKTEPLSVTYGLGQEEHDQEGRVITAEYP----DFYLVNVYTPNSQRGLTR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
              +     +   +     L  ++P+I  GD N+  QP D  NP     +A FT E R  
Sbjct: 116 L--EYRMQWEDVFQDYCAGLARKKPVIVCGDLNVAAQPIDLKNPDSNHKNAGFTDEERAK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           FQ+  + GF D+ R+ +      Y++W Y   +  +N G RID+ ++S      +    I
Sbjct: 174 FQQFLDHGFVDSFRSLYPDKEGAYTWWSYMFKARERNAGWRIDYFLVSQNGKDRIQDVII 233

Query: 242 DTKPRGWTKPSDHTPVIVS 260
             +  G    SDH PV + 
Sbjct: 234 HNEVMG----SDHCPVELE 248


>gi|261393405|emb|CAX51041.1| putative exodeoxyribonuclease [Neisseria meningitidis 8013]
          Length = 259

 Score =  176 bits (446), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 65/264 (24%), Positives = 120/264 (45%), Gaps = 13/264 (4%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++ + + NVN IR+        +I  +  DI+C+QE K ++ +   +       H     
Sbjct: 1   MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADLSADMKNPHGMHGHWHC 60

Query: 62  --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             ++ Y+GVA+ SK +P  +   +  ++ D + RF+   F      L + +LYLP G+  
Sbjct: 61  AEKRGYSGVAVYSKRKPDNVQIGMGIEEFDREGRFVRCDFD----RLSVISLYLPSGSSA 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +   K  ++  F             ++  GD+NI  Q  D  N    + ++ F  E 
Sbjct: 117 EERQQV-KYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEE 175

Query: 180 RQSF-QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R+   + +  +G+TD  R  +     Y++W     +++K+ G RID+ M++PE  +   S
Sbjct: 176 REWIGKVIHKLGWTDMWRTLYPDVPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVS 235

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
           A +        K SDH P++V  D
Sbjct: 236 AHVYKD----EKFSDHAPLVVEYD 255


>gi|149370979|ref|ZP_01890574.1| exodeoxyribonuclease III [unidentified eubacterium SCB49]
 gi|149355765|gb|EDM44323.1| exodeoxyribonuclease III [unidentified eubacterium SCB49]
          Length = 276

 Score =  176 bits (446), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 72/269 (26%), Positives = 129/269 (47%), Gaps = 14/269 (5%)

Query: 1   MSVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY---H 56
           ++ + + ++NVN IRA +   +  W+ + + D++C+QETK        + + +  Y   +
Sbjct: 18  LAPMKILSYNVNGIRAAMRKEMLTWLTQTDADVVCIQETKANQDQVDTDAIVAAGYPYHY 77

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
             +  +K Y+GVAI  K +P  I      + +D + R I   +      + I +LYLP G
Sbjct: 78  WFSAQKKGYSGVAIFCKNEPNHIEYGTGIESMDFEGRNIRVDYDG----VSIMSLYLPSG 133

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
               S + D K+ ++  F  + ++  +    L+  GDYNI  +  D +NP+  +N + F 
Sbjct: 134 --TNSARLDHKLEYMALFQDYVNELKKEIPNLVICGDYNICHEAIDIHNPVSNKNSSGFL 191

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
              R+      + GF D+ R  +     Y++W Y A++ + NKG RID+ M++      +
Sbjct: 192 PVEREWLGNFIDSGFIDSFRFLNKEPDNYTWWSYRANARANNKGWRIDYNMVATPLKEKI 251

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
             A I          SDH P +V LD+  
Sbjct: 252 KRAVILPAA----VHSDHCPHMVELDMSA 276


>gi|258542179|ref|YP_003187612.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-01]
 gi|256633257|dbj|BAH99232.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-01]
 gi|256636316|dbj|BAI02285.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-03]
 gi|256639369|dbj|BAI05331.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-07]
 gi|256642425|dbj|BAI08380.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-22]
 gi|256645480|dbj|BAI11428.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-26]
 gi|256648533|dbj|BAI14474.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-32]
 gi|256651586|dbj|BAI17520.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256654577|dbj|BAI20504.1| exodeoxyribonuclease III [Acetobacter pasteurianus IFO 3283-12]
          Length = 270

 Score =  176 bits (446), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 77/267 (28%), Positives = 128/267 (47%), Gaps = 6/267 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62
           + + TWN+NS+R R+  L   ++   PD++CLQETK  D  FP + +++L + H+   G 
Sbjct: 5   MRLVTWNINSLRLRLPLLEKLVRHLAPDVVCLQETKVPDPLFPEDGVKALGFEHLHYRGM 64

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K YNGVAILS++    + T  P        R + AT       + + + Y+P G    + 
Sbjct: 65  KGYNGVAILSRHPLKPV-TQTPVWYGKEDCRHVAATVCAPEGDVELHDFYIPAGGDEPAP 123

Query: 123 KYDDKISWIKRFLRFASQRLELE--EPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
           + + K +    F+   ++  +       +  GD+NI P  HD ++          T    
Sbjct: 124 ETNPKFAHKLAFVEEVTEWFQSRPLNRTVLVGDFNIAPLEHDVWSHKQLLKIVSHTPPET 183

Query: 181 QSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLLHS 238
           +   +    GF DA+R        LY++W Y    W K N+G R+DH+ ++P+    LH 
Sbjct: 184 ERLNRWLQTGFVDAMRHFVPADEKLYTWWSYRNRDWKKSNRGRRLDHVWMTPDLLPNLHG 243

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIPE 265
             +  + R W  PSDH PV+V   + +
Sbjct: 244 MTVVREARDWESPSDHVPVVVDFSLSD 270


>gi|186474828|ref|YP_001856298.1| exodeoxyribonuclease III Xth [Burkholderia phymatum STM815]
 gi|184191287|gb|ACC69252.1| exodeoxyribonuclease III Xth [Burkholderia phymatum STM815]
          Length = 259

 Score =  176 bits (446), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 63/263 (23%), Positives = 110/263 (41%), Gaps = 14/263 (5%)

Query: 3   VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59
           ++ V T N+N IR A       W  E   D++C+QE K    +   E L    +  + + 
Sbjct: 1   MLRVITANLNGIRSAAKKGFFDWFGEQKADVVCVQEIKCSQDDMTPEFLAPHGFTGYFQH 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G  + ++++P E+V     ++ D + R++EA F      L + ++Y+P G+  
Sbjct: 61  AVKKGYSGAGLYTRHEPDEVVIGFGSEEFDPEGRYVEARFG----NLSVISVYVPSGSSG 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +                  L  E  +I  GD NI+ +  D  N    + ++    E 
Sbjct: 117 DERQQA--KYRFMDEFMPHLAELSREREVIVCGDVNIVHKEIDIKNWKGNQKNSGCLPEE 174

Query: 180 RQSFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R    KL +  G+ D  R        Y++W     +++KN G RID+ + +P   +    
Sbjct: 175 RAWLTKLFDEVGYVDVFRTLDQRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGVAATAKR 234

Query: 239 ARIDTKPRGWTKPSDHTPVIVSL 261
             +        K SDH PV V  
Sbjct: 235 VDVFRDI----KFSDHAPVTVDY 253


>gi|295691547|ref|YP_003595240.1| exodeoxyribonuclease III Xth [Caulobacter segnis ATCC 21756]
 gi|295433450|gb|ADG12622.1| exodeoxyribonuclease III Xth [Caulobacter segnis ATCC 21756]
          Length = 268

 Score =  176 bits (446), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 77/272 (28%), Positives = 124/272 (45%), Gaps = 18/272 (6%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62
           + +ATWNVNS+R R    A ++ E+ PD++C+QE K +D  FP E  +++   H++  GQ
Sbjct: 3   LRIATWNVNSVRLRAEQAARFVDEHAPDVLCMQEIKCQDGEFPREAFEAMGLPHLKIAGQ 62

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K ++GVAI S+    ++ T      L            +    + I N Y+P G  +   
Sbjct: 63  KGWHGVAIASRLPIEDVPT------LMNCREGHARCVAVKVAGVEIQNFYIPAGGDLPDR 116

Query: 123 KYDDKISWIKRFLRFASQRL---ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
             + K      F    +  L   + ++PLI  GD NI P  +D ++          T   
Sbjct: 117 AANPKFDHKLDFYETLTAALKKRDPKDPLIVTGDLNIAPGENDVWSHRQMLKVVSHTPPE 176

Query: 180 RQSFQ--KLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLL 236
            ++F               AT +   L+S+W Y A  + K N+G+R+DHI+ SP      
Sbjct: 177 LEAFDALIKSMDLLDLPRLATPEPDKLFSWWSYRAADFRKSNRGLRLDHILASPGLRDAA 236

Query: 237 -----HSARIDTKPRGWTKPSDHTPVIVSLDI 263
                 ++R+    R W +PSDH PV   L +
Sbjct: 237 IVDGQVASRVHDDVREWERPSDHAPVTADLKV 268


>gi|78355598|ref|YP_387047.1| exodeoxyribonuclease III [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78218003|gb|ABB37352.1| exodeoxyribonuclease III [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 336

 Score =  176 bits (446), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 70/268 (26%), Positives = 108/268 (40%), Gaps = 15/268 (5%)

Query: 1   MSVVTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
             +V + +WNVN  RA R      W    + D+I LQETK   +           YH   
Sbjct: 79  FEIVKLYSWNVNGFRAIRQKPDWDWFSGCDADVIGLQETKAMPEQIDPADRNPAGYHSYW 138

Query: 60  ---CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                +K Y+GVA  S+ +P+ +   LP +    + R I   +          N+Y P+G
Sbjct: 139 LGATVKKGYSGVAAFSRREPLSVAYDLPVEQYQGEGRVIMLEYDA----FYYFNIYFPNG 194

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
                                 +Q L  ++P++  GD+N   +P D   P   E  + F 
Sbjct: 195 QSGDERLQ--YKLGFYDAFLEHAQTLRRKKPIVVCGDFNTAHRPVDLARPRENEGTSGFL 252

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHH-LYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
              R    K  + G+ D  R  H     +YS+W Y   +  +N G RID+  +S E    
Sbjct: 253 PVERAWMDKFIDHGYVDTFRLVHPDAQAMYSWWSYRFKARDRNVGWRIDYFFVSDELRHA 312

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +  A I+ +  G    SDH PV + L +
Sbjct: 313 VKDATIEMEVFG----SDHCPVGLELAL 336


>gi|319940717|ref|ZP_08015059.1| exodeoxyribonuclease III [Sutterella wadsworthensis 3_1_45B]
 gi|319805868|gb|EFW02635.1| exodeoxyribonuclease III [Sutterella wadsworthensis 3_1_45B]
          Length = 263

 Score =  176 bits (446), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 59/265 (22%), Positives = 108/265 (40%), Gaps = 13/265 (4%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59
           +  + T+N N IR+        W++  +PD++C+QE K ++ +   +    L +  +   
Sbjct: 1   MFRIITFNANGIRSASRKGFFTWLRTMSPDVLCMQELKAQESDLTEDLRTPLGFRGYFHC 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G  + S+ +P  + T     + D + R++EA F        I           
Sbjct: 61  AQKKGYSGCGLWSRVKPFAVRTGFGNSEFDAEGRYVEADFGS-----VIVISVYFPSGSS 115

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
           +  +   K  ++  F     +  +    +I  GD NI  +  D  N     + + F  E 
Sbjct: 116 SDDRQSAKFRFLDAFKVHMDELRQSGREVIICGDINIAHKEIDLKNWKGNLDHSGFLPEE 175

Query: 180 RQS-FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R    Q+    G+ D  R        Y++W     + +KN G RID+ + +P   +L  +
Sbjct: 176 RAWLDQRFGKEGWVDVFRMLDPRPERYTWWSQRGQARAKNVGWRIDYQITTPGIAALARN 235

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263
             I        K SDH P+ V  D+
Sbjct: 236 TGIFPD----EKFSDHAPLWVDYDL 256


>gi|170693993|ref|ZP_02885149.1| exodeoxyribonuclease III Xth [Burkholderia graminis C4D1M]
 gi|170141065|gb|EDT09237.1| exodeoxyribonuclease III Xth [Burkholderia graminis C4D1M]
          Length = 260

 Score =  176 bits (446), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 64/264 (24%), Positives = 113/264 (42%), Gaps = 14/264 (5%)

Query: 3   VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59
           ++ V T N+N IR A       W  E N D++C+QE K    +   E L   ++  + + 
Sbjct: 1   MLRVITANLNGIRSAAKKGFFDWFGEQNADVLCVQEIKCSQDDMTPEFLAPHDFTGYFQH 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G  + ++++P E+V     ++ D + R++E  F      L + ++Y+P G+  
Sbjct: 61  AVKKGYSGAGVYTRHEPDEVVIGFGSEEFDPEGRYVELRFG----KLSVVSVYVPSGSSG 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +                 +L  E  +I  GD NI+ +  D  N    + ++    E 
Sbjct: 117 EERQQA--KYRFMDEFMPHLAQLAREREVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEE 174

Query: 180 RQSFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R    KL +  G+ D  R        Y++W     +++KN G RID+ + +P   S    
Sbjct: 175 RAWLTKLFDEVGYVDVFRTLDQRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGIASKAKR 234

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
             +        K SDH P+ V  D
Sbjct: 235 TEVFRDI----KFSDHAPLTVDYD 254


>gi|261400777|ref|ZP_05986902.1| exodeoxyribonuclease III [Neisseria lactamica ATCC 23970]
 gi|269209377|gb|EEZ75832.1| exodeoxyribonuclease III [Neisseria lactamica ATCC 23970]
          Length = 259

 Score =  176 bits (445), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 64/264 (24%), Positives = 120/264 (45%), Gaps = 13/264 (4%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++ + + NVN IR+        +I  +  DI+C+QE K ++ +   +       H     
Sbjct: 1   MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADLSADMKNPHGMHGYWHC 60

Query: 62  --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             ++ Y+GVA+  K +P  +   +  ++ D + RF+   F      L + +LYLP G+  
Sbjct: 61  AEKRGYSGVAVYGKRKPDNVQIGMGIEEFDREGRFVRCDFG----RLSVISLYLPSGSSA 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +   K  ++  F             ++  GD+NI  Q  D  N    + ++ F  E 
Sbjct: 117 EERQQV-KYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEE 175

Query: 180 RQSF-QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R+   + +  +G+TD  R  +  +  Y++W     +++K+ G RID+ M++PE  +   S
Sbjct: 176 REWIGKVIHKLGWTDMWRTLYPDNPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVS 235

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
           A +        K SDH P++V  D
Sbjct: 236 AHVYKD----EKFSDHAPLVVEYD 255


>gi|167561089|ref|ZP_02354005.1| exodeoxyribonuclease III [Burkholderia oklahomensis EO147]
 gi|167568307|ref|ZP_02361181.1| exodeoxyribonuclease III [Burkholderia oklahomensis C6786]
          Length = 256

 Score =  176 bits (445), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 61/264 (23%), Positives = 110/264 (41%), Gaps = 14/264 (5%)

Query: 3   VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59
           ++ V T N+N IR A       W+ E N D +C+QE K    + P E ++   +  +   
Sbjct: 1   MLRVITANLNGIRSAAKKGFFDWLGEQNADCVCVQEIKVSADDLPAEFVEPHGFRSYFHH 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G  +  + +P +++      + D + R++EA F      L + ++Y+P G+  
Sbjct: 61  AEKKGYSGAGLYLRREPDDVIIGYGSSEFDSEGRYVEARFG----KLSVVSVYVPSGSSG 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +                  L+ +  +I  GD NI+ +  D  N    + ++    E 
Sbjct: 117 DERQQA--KYRFMDEFMPHLAELKAKREVILCGDVNIVHKEIDIKNWKSNQKNSGCLPEE 174

Query: 180 RQSFQK-LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R    K   ++G+ D  R        Y++W     +++KN G RID+ + +P        
Sbjct: 175 RAWLTKLFDDVGYVDVFRTLDARPEQYTWWSNRGQAYAKNVGWRIDYQIATPGIAGTAKR 234

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
             I        K SDH P+ V  D
Sbjct: 235 TSIFRDI----KFSDHAPLTVDYD 254


>gi|15639119|ref|NP_218565.1| exodeoxyribonuclease (exoA) [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189025359|ref|YP_001933131.1| exodeoxyribonuclease [Treponema pallidum subsp. pallidum SS14]
 gi|3322391|gb|AAC65116.1| exodeoxyribonuclease (exoA) [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189017934|gb|ACD70552.1| exodeoxyribonuclease [Treponema pallidum subsp. pallidum SS14]
 gi|291059544|gb|ADD72279.1| exodeoxyribonuclease III [Treponema pallidum subsp. pallidum str.
           Chicago]
 gi|313505256|gb|ADR64396.1| exodeoxyribonuclease III [Treponema pallidum subsp. pallidum]
 gi|313505276|gb|ADR64415.1| exodeoxyribonuclease III [Treponema pallidum subsp. pallidum str.
           Mexico A]
          Length = 264

 Score =  176 bits (445), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 57/267 (21%), Positives = 100/267 (37%), Gaps = 20/267 (7%)

Query: 5   TVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS---------LN 54
            + +WNVN IRA    +  +W+    PD++CLQE K  +                     
Sbjct: 6   RIISWNVNGIRAIERKDFLSWLAREAPDVLCLQEIKAHESQLSAALRAPVWSAGAGGTYY 65

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
            +  +  +  Y+G A+ SK  P  +                     +   +    N    
Sbjct: 66  TYFHSAQRPGYSGTALFSKRAPDAVRFFGVPAFDCEGRMLAARFGELTVVSAYFPNAQ-- 123

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
                   +   K+ +   F  F  +     + +I  GDYNI  +  D  +P   E +  
Sbjct: 124 ----EGGKRLAYKLDFCAAFRAFCDEERTAGQHVILCGDYNIAHKEIDLAHPQENEGNPG 179

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
           F  + R         G+ D+ RA       Y++W Y A + ++N G RID+  +     +
Sbjct: 180 FLPQERAWMDTFTEAGYADSFRAFCTEGQQYTWWSYRARARARNIGWRIDYQCVDQAFLA 239

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261
            + S++I ++  G    SDH PV ++ 
Sbjct: 240 RVTSSQILSEVTG----SDHCPVCLTY 262


>gi|57237312|ref|YP_178325.1| exodeoxyribonuclease III [Campylobacter jejuni RM1221]
 gi|148926400|ref|ZP_01810084.1| exodeoxyribonuclease [Campylobacter jejuni subsp. jejuni CG8486]
 gi|57166116|gb|AAW34895.1| exodeoxyribonuclease III [Campylobacter jejuni RM1221]
 gi|145844792|gb|EDK21897.1| exodeoxyribonuclease [Campylobacter jejuni subsp. jejuni CG8486]
          Length = 259

 Score =  176 bits (445), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 62/264 (23%), Positives = 98/264 (37%), Gaps = 12/264 (4%)

Query: 2   SVVTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
            ++ + +WNVN +RA    N   WI +   D I  QE K  +  FP +  +    H+   
Sbjct: 6   KIMKLLSWNVNGLRAICDKNALDWIAQEQIDFIGFQEIKAHEDKFPKKIYEYPFKHMYFN 65

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
             K      ++S       V      D +           I    +   N          
Sbjct: 66  SAKRAGYSGVMSLCNFNSEVKKCEFFDDEEGRVLEHRFKNIALFNIYFPN------GQKD 119

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             + + K+ +   FL +  + L+    +I  GD N   +  D  +P    N + F    R
Sbjct: 120 EERLNFKMQFYADFLVYLDKLLKDGFEIIICGDVNTAHKEIDLTHPKANANTSGFLPIER 179

Query: 181 QSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
                L  +GF D  R  + +    YS+W Y   +  +N G RID+  +S      L +A
Sbjct: 180 AWIDDLLKLGFIDTFREINGEIKEKYSWWSYRMKARERNVGWRIDYFFISKGLKDKLKNA 239

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
            I     G    SDH PV + +DI
Sbjct: 240 FIRDDIFG----SDHAPVGIEIDI 259


>gi|291612503|ref|YP_003522660.1| exodeoxyribonuclease III Xth [Sideroxydans lithotrophicus ES-1]
 gi|291582615|gb|ADE10273.1| exodeoxyribonuclease III Xth [Sideroxydans lithotrophicus ES-1]
          Length = 288

 Score =  176 bits (445), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 69/291 (23%), Positives = 114/291 (39%), Gaps = 36/291 (12%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETC 60
           + + T N+N IR+     L  W    + DI+C+QE K +  +   + L  L YH      
Sbjct: 1   MRIITLNLNGIRSAYNKGLLEWFSRQDADILCVQELKAQAADMTADMLSPLGYHGYFHYA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT-INTQTLRIGNLYLPHGNPI 119
            +K Y+GV I SK +P  ++  L   + D + R+IEA F  ++  +L + +         
Sbjct: 61  EKKGYSGVGIYSKRKPDSVIVGLDIPEFDAEGRYIEAQFGNLSVVSLYLPSGSSGEERQA 120

Query: 120 TSTKYDDKISWIKRFLR---------------------------FASQRLELEEPLIFAG 152
              K+ +      R +                               Q       +I  G
Sbjct: 121 VKFKFMEAFMPHLRQMMENSKVPVVGESRLLPQTAGSTSNVSQPHMVQLQRSGRDVIVCG 180

Query: 153 DYNIIPQPHDCYNPIIWENDACFTLEVRQS-FQKLQNMGFTDAIRATHDTHHLYSFWDYY 211
           D+NI     D  N    + ++ F  E R    + L  +GF D  R  H     Y++W   
Sbjct: 181 DWNIAHTEKDLRNWRGNKKNSGFLPEERAWLTELLGEVGFVDVFRKLHPELEAYTWWSNR 240

Query: 212 ADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
             +W+K+ G RID+ + +P   +   S  I  + R     SDH P++V   
Sbjct: 241 GQAWAKDVGWRIDYQIATPGMAAKAVSTGIYKEQR----FSDHAPLMVDYK 287


>gi|253997612|ref|YP_003049676.1| exodeoxyribonuclease III Xth [Methylotenera mobilis JLW8]
 gi|253984291|gb|ACT49149.1| exodeoxyribonuclease III Xth [Methylotenera mobilis JLW8]
          Length = 256

 Score =  176 bits (445), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 69/264 (26%), Positives = 122/264 (46%), Gaps = 15/264 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETC 60
           + + + N+N IR+     L AW+K  + D+IC+QE K +  +   + L    Y+      
Sbjct: 1   MKIISLNLNGIRSATNKGLYAWLKNQDADVICMQELKAQAGDMTEQMLNPEGYYGYFHYA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GV I SK +   ++  L  +D+D + R++EA F      L + +LYLP G+   
Sbjct: 61  EKKGYSGVGIYSKTKADSVIEGLGIEDIDSEGRYLEARFG----NLSVVSLYLPSGS-SG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   K S ++RF+      ++    ++  GD+NI  +  D  N      ++ F  E R
Sbjct: 116 EERQAFKFSVMERFMPQLHALVQSGRDVVICGDWNIAHKEADLKNWKGNRKNSGFLPEER 175

Query: 181 QSFQK-LQNMGFTDAIRATHDT--HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
               +   +MG+ D  R  +       Y++W     +W+ N G RID+ + +P   +   
Sbjct: 176 AWLTQLFDDMGWVDVYRTLYPDTTDACYTWWSNRGQAWANNVGWRIDYQIATPAFAAKAV 235

Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261
           S  +    R     SDH P+I+  
Sbjct: 236 STSVYKDER----FSDHAPLIIDY 255


>gi|158317046|ref|YP_001509554.1| exodeoxyribonuclease III Xth [Frankia sp. EAN1pec]
 gi|158112451|gb|ABW14648.1| exodeoxyribonuclease III Xth [Frankia sp. EAN1pec]
          Length = 297

 Score =  176 bits (445), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 78/262 (29%), Positives = 125/262 (47%), Gaps = 6/262 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFP---FETLQSLNYHIETC 60
           + +ATWN+NS +AR   L  W+   +PD++CLQETK  D+ F     E L    Y +   
Sbjct: 1   MRIATWNINSAKARQPRLIEWLDRASPDVVCLQETKLSDEAFLELFDEDLFRRGYRVAHH 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           G   +NGVAILS+    ++   LPGD           + +     +RI +LY+P+G  + 
Sbjct: 61  GDGRWNGVAILSRAGLEDVRRGLPGDPGFPGPEPRAISASCGG--IRIWSLYVPNGRTVE 118

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
              Y  K++W+       ++       +   GD+NI P   D ++   +E     T   R
Sbjct: 119 DPHYAYKLAWLAALRDVVAELAPQGPVM-TLGDFNIAPTDADVWDIAEFEGATHVTEAER 177

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            +  +L + G  D +R       +Y++WDY    + KN G+RID  + + +  +   +  
Sbjct: 178 AALGRLHDAGLLDLMRERWPDETVYTYWDYRQLCFPKNYGMRIDLTLATADVAARARAVW 237

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           +D   R  T  SDH PV+V LD
Sbjct: 238 VDRAARKGTGTSDHAPVVVDLD 259


>gi|304310166|ref|YP_003809764.1| Exodeoxyribonuclease III [gamma proteobacterium HdN1]
 gi|301795899|emb|CBL44100.1| Exodeoxyribonuclease III [gamma proteobacterium HdN1]
          Length = 277

 Score =  176 bits (445), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 74/262 (28%), Positives = 118/262 (45%), Gaps = 13/262 (4%)

Query: 6   VATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC--GQ 62
           + + N N IR A       WI++  PD++C+QETK +             YH       +
Sbjct: 22  IVSANTNGIRSAASKGFLEWIQKRQPDVVCIQETKAQLHQLDVFITDIPGYHSYFFDAQK 81

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+GVA+  K +P  +V  L     D + R+++  F      L + +LYLP G+     
Sbjct: 82  KGYSGVAVYCKREPDRVVRGLGFPIADDEGRYLQVDFG----DLSVASLYLPSGSASDEA 137

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
             + K  ++  FL       E     I  GD+NI  +  D  N    + ++ F  E R  
Sbjct: 138 -QEKKYRFLDTFLPMMKAWREDGRRYILCGDWNIAHKNIDIKNWRSNQKNSGFLPEERAW 196

Query: 183 FQKLQNMG-FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             ++ +   + DA RA +     Y++W     +W+KN G RID+ ++SPE    + S  I
Sbjct: 197 LDRVFDEQGWVDAFRAVNSEADQYTWWSNRGQAWAKNVGWRIDYQIVSPELRDTISSTEI 256

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
               R     SDH P+++S DI
Sbjct: 257 YKDER----FSDHAPLLMSYDI 274


>gi|309379305|emb|CBX22078.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 259

 Score =  176 bits (445), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 64/264 (24%), Positives = 120/264 (45%), Gaps = 13/264 (4%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++ + + NVN IR+        +I  +  DI+C+QE K ++ +   +       H     
Sbjct: 1   MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADLSADMKNPHGMHGYWHC 60

Query: 62  --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             ++ Y+GVA+  K +P  +   +  ++ D + RF+   F      L + +LYLP G+  
Sbjct: 61  AEKRGYSGVAVYGKRKPDNVQIGMGIEEFDREGRFVRCDFG----RLSVISLYLPSGSSA 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +   K  ++  F             ++  GD+NI  Q  D  N    + ++ F  E 
Sbjct: 117 EERQQV-KYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEE 175

Query: 180 RQSF-QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R+   + +  +G+TD  R  +  +  Y++W     +++K+ G RID+ M++PE  +   S
Sbjct: 176 REWIGKVIHTLGWTDMWRTLYPDNPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVS 235

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
           A +        K SDH P++V  D
Sbjct: 236 AHVYKD----EKFSDHAPLVVEYD 255


>gi|325981921|ref|YP_004294323.1| exodeoxyribonuclease III Xth [Nitrosomonas sp. AL212]
 gi|325531440|gb|ADZ26161.1| exodeoxyribonuclease III Xth [Nitrosomonas sp. AL212]
          Length = 257

 Score =  176 bits (445), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 69/263 (26%), Positives = 119/263 (45%), Gaps = 13/263 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + T N+N IRA +      W+   + D++C+QE K +  +          YH      
Sbjct: 1   MQIITLNLNGIRAAVKKGFLQWLAAQSADVVCVQELKAQLPDLSPAIQSPDGYHGYFHCA 60

Query: 62  -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            Q+ Y+GV I ++ +P +++  +   D+D + RF++A F      L I ++YLP G+   
Sbjct: 61  GQRGYSGVGIYTRKKPDQVIEGIGIADIDAEGRFLQADFG----NLSIISIYLPSGS-SG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   K  ++++F             +I  GD+NI  +  D  N    + ++ F  E R
Sbjct: 116 EHRQAAKFYFMEKFFPVLQNLKISNREIILCGDWNIAHKEIDLKNWRSNQKNSGFLPEER 175

Query: 181 QS-FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           +     L+N GF D  R  +     Y++W     +W+KN G RID+ + +P    L    
Sbjct: 176 EWLSNVLENSGFIDVFRRLNAEPDQYTWWSNRGQAWAKNVGWRIDYQIATPAIAQLAQRV 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
            I    R     SDH P+I+  D
Sbjct: 236 SIYKDER----FSDHAPLIIDYD 254


>gi|153208660|ref|ZP_01946912.1| exodeoxyribonuclease III [Coxiella burnetii 'MSU Goat Q177']
 gi|165919791|ref|ZP_02219534.1| exodeoxyribonuclease III [Coxiella burnetii RSA 334]
 gi|212218132|ref|YP_002304919.1| exodeoxyribonuclease III [Coxiella burnetii CbuK_Q154]
 gi|120575846|gb|EAX32470.1| exodeoxyribonuclease III [Coxiella burnetii 'MSU Goat Q177']
 gi|165916874|gb|EDR35478.1| exodeoxyribonuclease III [Coxiella burnetii RSA 334]
 gi|212012394|gb|ACJ19774.1| exodeoxyribonuclease III [Coxiella burnetii CbuK_Q154]
          Length = 259

 Score =  176 bits (445), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 62/263 (23%), Positives = 108/263 (41%), Gaps = 13/263 (4%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + T N+N IRA        W+K    DI+CLQETK   +    +      YH      
Sbjct: 1   MRIITLNLNGIRAAARRGFFDWLKRQKADIVCLQETKACLEITNGDQFHPKGYHCYYHDA 60

Query: 63  KS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           +   Y+GV I  + +P  + T L  +  D + R+I+A F   +                 
Sbjct: 61  EKSGYSGVGIYCREKPDRVTTRLGWEHADKEGRYIQADFGSLSV-----ASLYMPSGTTG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   K  ++  +++     +  +   I  GD+NI+ +  D  N    +  +    E R
Sbjct: 116 EHRQKIKFDFMDHYMKRLKNIVHSKRSFIICGDWNIVHKEIDIKNFKSNQKHSGCLPEER 175

Query: 181 QS-FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
               +    +G  DA R  +     Y++W     +W KN G RID+ +++ +  + + S 
Sbjct: 176 AWLDEVFTKVGLVDAFRVVNQKPDQYTWWSSRGRAWEKNVGWRIDYQVITSDLKNSVKSE 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
           RI    R     SDH P+I+  +
Sbjct: 236 RIYKDKR----FSDHAPLIIDYE 254


>gi|116328536|ref|YP_798256.1| exodeoxyribonuclease III [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116331264|ref|YP_800982.1| exodeoxyribonuclease III [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116121280|gb|ABJ79323.1| Exodeoxyribonuclease III [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116124953|gb|ABJ76224.1| Exodeoxyribonuclease III [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 254

 Score =  176 bits (445), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 64/263 (24%), Positives = 112/263 (42%), Gaps = 12/263 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETC 60
           + + + N N IR+ +   L+ +I++  PD IC QETK   +  P    +   Y     + 
Sbjct: 1   MKLISLNCNGIRSSLGKGLSDYIRDRKPDFICFQETKATQEQIPPSLWEEGGYTPVFHSA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GVA+L K  P +I   L     D + R I   +                     
Sbjct: 61  EKKGYSGVAVLYKKPPQKITIGLGDPFFDKEGRSIYLEYPDFALW-----NSYFPSGTTG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   K+ ++  F + A++R + +  ++  GD NI   P D ++P      + F  E R
Sbjct: 116 EVRQAVKMKFLDLFQKEAAKRRKKQPNILLCGDINIAHTPQDIHDPKGNAKSSGFLPEER 175

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           +   +    G+ D  R  +     YS+W + A + +KNKG RID+  ++ E    + S  
Sbjct: 176 EWLTQFLEKGWVDTFRYLYPEKQEYSWWTFRAGARAKNKGWRIDYFFVTAELKKNVKSQS 235

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263
           I          SDH P+ + + +
Sbjct: 236 IYRD----KPLSDHAPLELEIKL 254


>gi|317133644|ref|YP_004092958.1| exodeoxyribonuclease III Xth [Ethanoligenens harbinense YUAN-3]
 gi|315471623|gb|ADU28227.1| exodeoxyribonuclease III Xth [Ethanoligenens harbinense YUAN-3]
          Length = 256

 Score =  176 bits (445), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 61/258 (23%), Positives = 104/258 (40%), Gaps = 13/258 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +    A +      DI C+QETK   +   F           +  +
Sbjct: 1   MKLISWNVNGLRACMQKGFADFFNREEADIFCVQETKMHPEQADF-AFDGYQSFWNSAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G A+ ++  P+ +   +   +   + R I                     +     
Sbjct: 60  KGYSGTAVFTRVPPLSVRYDMGEPEHTGEGRVITVESEAF-----FLVNVYTPNSQRDLV 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           + D ++ W   F  +    L  ++P++  GD N+  +  D  NP    ++A FT E RQ 
Sbjct: 115 RLDYRMRWEDAFRAYLLT-LNRDKPVVVCGDMNVAHREIDIKNPKSNIHNAGFTPEERQK 173

Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
              L   GF D  RA +      Y++W Y   +  +N G RID+ ++S      +  + I
Sbjct: 174 MTDLLEAGFIDTFRALYPEQKDAYTWWSYMRKARERNAGWRIDYFLVSDRLRGQVEDSTI 233

Query: 242 DTKPRGWTKPSDHTPVIV 259
                G    SDH PV +
Sbjct: 234 YADVPG----SDHCPVGL 247


>gi|299538266|ref|ZP_07051551.1| exodeoxyribonuclease [Lysinibacillus fusiformis ZC1]
 gi|298726468|gb|EFI67058.1| exodeoxyribonuclease [Lysinibacillus fusiformis ZC1]
          Length = 251

 Score =  176 bits (445), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 64/260 (24%), Positives = 109/260 (41%), Gaps = 13/260 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN IRA +      +  + + D  C+QETK +        ++    +     +
Sbjct: 1   MKFISWNVNGIRACLGKGFLEFFHQIDADFFCIQETKCQAGQVVLS-IEGYEQYWNYAQK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K+ P+ +   +  +D   + R I   +        + N+Y P+     + 
Sbjct: 60  KGYSGTAIFTKHTPLSVKYGVGAEDSQDEGRIITLEYK----NFYLVNVYTPNAQRDLAR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +  L    Q L  ++P+++ GD N+     D  N      ++ FT E R  
Sbjct: 116 L--PLRLQWEDRLANYLQELNCQKPVVYCGDLNVAHTEIDLKNAKSNIGNSGFTYEERAK 173

Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F  L   GF D+ R  H      Y++W Y      +N G RID+ ++S +    + SA I
Sbjct: 174 FSALLESGFVDSFRYKHPEETDHYTWWSYMNKVRERNIGWRIDYFVVSNQLKEQIESATI 233

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
                G    SDH P+ + L
Sbjct: 234 HPHIMG----SDHCPIELQL 249


>gi|166710372|ref|ZP_02241579.1| exodeoxyribonuclease III [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 266

 Score =  176 bits (445), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 62/273 (22%), Positives = 105/273 (38%), Gaps = 24/273 (8%)

Query: 4   VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + ++N N +R A      AW    + D++C+QETK ++            Y       
Sbjct: 1   MRIISFNANGLRSAASKGFFAWFAAQDADVLCVQETKAQEHQLAGPDFLPTGYKAWFRDA 60

Query: 62  --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GVAI S+++P E+ T L   + D + R+IEA F       R    +       
Sbjct: 61  STKKGYSGVAIYSRHEPDEVRTALGWPEFDEEGRYIEARFGN-----RSVVSFYIPSGSS 115

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +   K   ++       + L      +  GD+NI+    D  N    + ++      
Sbjct: 116 GELRQGYKFQVMQWLRPILDEWLASGRQYVLCGDWNIVRTALDIKNWKSNQKNSGCLPPE 175

Query: 180 RQSFQKLQN-----------MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
           R     L              G+ D+ R  H     Y++W     + + N G RID+ ++
Sbjct: 176 RDWLNGLCADVPEDANAAEGRGWVDSYRVLHPQGQDYTWWSNRGAARTNNVGWRIDYQLV 235

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           +P     L +  I  + R     SDH P IV  
Sbjct: 236 TPCLRDTLKACSIYREER----FSDHAPYIVDY 264


>gi|148643539|ref|YP_001274052.1| exodeoxyribonuclease, XthA [Methanobrevibacter smithii ATCC 35061]
 gi|222444963|ref|ZP_03607478.1| hypothetical protein METSMIALI_00579 [Methanobrevibacter smithii
           DSM 2375]
 gi|261350463|ref|ZP_05975880.1| exodeoxyribonuclease III [Methanobrevibacter smithii DSM 2374]
 gi|148552556|gb|ABQ87684.1| exodeoxyribonuclease, XthA [Methanobrevibacter smithii ATCC 35061]
 gi|222434528|gb|EEE41693.1| hypothetical protein METSMIALI_00579 [Methanobrevibacter smithii
           DSM 2375]
 gi|288861246|gb|EFC93544.1| exodeoxyribonuclease III [Methanobrevibacter smithii DSM 2374]
          Length = 257

 Score =  176 bits (445), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 75/267 (28%), Positives = 117/267 (43%), Gaps = 14/267 (5%)

Query: 1   MSVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           MSV  + +WNVN IRA         W    N DII  QE +  + + P +      ++  
Sbjct: 1   MSV-KLVSWNVNGIRAASKKPEFWDWFNSTNADIINFQEVRATEDSIPEKLTDVAGFNSY 59

Query: 59  TCG--QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                +K Y+GV   SK +P  +V  L  + LD + R +   ++       + N+Y P+ 
Sbjct: 60  FNEAEKKGYSGVGTFSKIKPENVVRGLGVEALDREGRVLRLEYS----DFTLFNIYFPNS 115

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
               + + D KI +    L          + LI  GD NI   P D YNP   E  + + 
Sbjct: 116 GM-NAKRLDYKIDFCNALLDLLEDLKNQGQNLIITGDVNIAHNPIDVYNPANCEGKSGYL 174

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
           +E R+    L   GF D  R   D+   +++W Y   +  +N G R+D+  ++ E  + +
Sbjct: 175 IEEREWLDDLLASGFVDTFRMFDDSGDNFTWWSYRTRARDRNAGWRLDYFFVNEEFKNKV 234

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263
            SA I     G    SDH PV + LD+
Sbjct: 235 KSATIKNDVFG----SDHCPVTLELDL 257


>gi|269213939|ref|ZP_05983198.2| exodeoxyribonuclease III [Neisseria cinerea ATCC 14685]
 gi|269144958|gb|EEZ71376.1| exodeoxyribonuclease III [Neisseria cinerea ATCC 14685]
          Length = 274

 Score =  176 bits (445), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 64/264 (24%), Positives = 117/264 (44%), Gaps = 13/264 (4%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++ + + NVN IR+        +I  +  DI+C+QE K ++ +   +       H     
Sbjct: 16  MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADLSADMKNPHGMHGHWHC 75

Query: 62  --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             ++ Y+GVA+ SK  P  +   +  ++ D + RF+   F      L + +LYLP G+  
Sbjct: 76  AEKRGYSGVAVYSKRAPDNVQIGMGIEEFDREGRFVRCDFG----KLSVISLYLPSGSSA 131

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +          F             ++  GD+NI  Q  D  N    + ++ F  E 
Sbjct: 132 EERQQVKYRFLDV-FYPMLEAMKNEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEE 190

Query: 180 RQSF-QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R+   + +  +G+TD  R  +  +  Y++W     +++K+ G RID+ M++PE  +   S
Sbjct: 191 REWIGKVIHKLGWTDMWRTLYPDNPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVS 250

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
           A +        K SDH P++V  D
Sbjct: 251 AHVYKD----EKFSDHAPLVVEYD 270


>gi|330834656|ref|YP_004409384.1| exodeoxyribonuclease III Xth [Metallosphaera cuprina Ar-4]
 gi|329566795|gb|AEB94900.1| exodeoxyribonuclease III Xth [Metallosphaera cuprina Ar-4]
          Length = 256

 Score =  176 bits (445), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 69/259 (26%), Positives = 101/259 (38%), Gaps = 13/259 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVNS+++ I   L   IK    D++  QE KT     P +  QSL Y       
Sbjct: 8   LKILSWNVNSLKSAIAKGLMEIIKSEEYDVLMFQEIKTN--QLPLD-FQSLPYRAYINPS 64

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K   G +       IE ++   G   +          T       I   +   G  +   
Sbjct: 65  KQKRGYSGTLTLTRIEPISVTYGIGKEEFDVEGRVISTEFKSMFVINVYFPNAGEGLKRL 124

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
            +      ++    F      L +P +  GD+N+  +  D   P    N A FT E R+ 
Sbjct: 125 DF-----KLRFNRAFQEYVASLGKPSVICGDFNVAHEEIDIARPKDNVNHAGFTPEERKW 179

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F +    GF D  R        YS+W Y   +  KN G RID+ ++S E  S +  A I 
Sbjct: 180 FHEFLLSGFVDTFRLFVKEPGHYSWWSYRFHAREKNIGWRIDYCVVSKELESKVKKAEIL 239

Query: 243 TKPRGWTKPSDHTPVIVSL 261
            K  G    SDH PV V +
Sbjct: 240 EKVMG----SDHAPVTVEI 254


>gi|205356520|ref|ZP_03223283.1| exodeoxyribonuclease [Campylobacter jejuni subsp. jejuni CG8421]
 gi|205345525|gb|EDZ32165.1| exodeoxyribonuclease [Campylobacter jejuni subsp. jejuni CG8421]
          Length = 259

 Score =  176 bits (445), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 62/264 (23%), Positives = 98/264 (37%), Gaps = 12/264 (4%)

Query: 2   SVVTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
            ++ + +WNVN +RA    N   WI +   D I  QE K  +  FP +  +    H+   
Sbjct: 6   KIMKLLSWNVNGLRAICDKNALDWIAQEQIDFIGFQEIKAHEDKFPKKIYEYPFKHMYFN 65

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
             K      ++S       V      D +           I    +   N          
Sbjct: 66  SAKRAGYSGVMSLCNFNSEVKKCEFFDDEEGRVLEHRFKNIALFNIYFPN------GQKD 119

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             + + K+ +   FL +  + L+    +I  GD N   +  D  +P    N + F    R
Sbjct: 120 EERLNFKMKFYADFLVYLDKLLKDGFEIIICGDVNTAHKEIDLTHPKANANTSGFLPIER 179

Query: 181 QSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
                L  +GF D  R  + +    YS+W Y   +  +N G RID+  +S      L +A
Sbjct: 180 AWIDDLLKLGFIDTFREINGEIKEKYSWWSYRMKARERNVGWRIDYFFISKGLKDKLKNA 239

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
            I     G    SDH PV + +DI
Sbjct: 240 FIRDDIFG----SDHAPVGIEIDI 259


>gi|300776438|ref|ZP_07086296.1| exodeoxyribonuclease III [Chryseobacterium gleum ATCC 35910]
 gi|300501948|gb|EFK33088.1| exodeoxyribonuclease III [Chryseobacterium gleum ATCC 35910]
          Length = 254

 Score =  176 bits (445), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 75/264 (28%), Positives = 120/264 (45%), Gaps = 14/264 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC-- 60
           + + T+NVN IRA    +   W+K  +PDIIC+QE+K  +     E+L+ L YH      
Sbjct: 1   MRLITYNVNGIRAAFTKDFLGWLKTADPDIICIQESKAGNDQIDIESLEKLGYHSYWHSA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GV I SK +P  +      +  D + R I A F   +       + +   +   
Sbjct: 61  VRKGYSGVGIASKIKPNHVEFGCGIESYDNEGRIIRADFDGYS------AISVYVPSASN 114

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             + D K+ +   FL +     +    LI +GD+NI  +  D +NP+  +N + F    R
Sbjct: 115 IERLDFKMQFCYDFLEYIKNLKKEIPNLIISGDFNICHEAIDIHNPVGLKNVSGFLPMER 174

Query: 181 QSFQKLQNMGF-TDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           +      N     D+ R  ++    Y++W Y  +S  +NKG R+D+   S      L  A
Sbjct: 175 EWMTNFINECELIDSFRFFNNEPDNYTWWSYRQNSRERNKGWRLDYNFTSYSLKDKLSRA 234

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
            I  +       SDH P +V LDI
Sbjct: 235 VILKEA----VHSDHCPALVELDI 254


>gi|154175230|ref|YP_001407411.1| exodeoxyribonuclease III [Campylobacter curvus 525.92]
 gi|112802161|gb|EAT99505.1| exodeoxyribonuclease III [Campylobacter curvus 525.92]
          Length = 252

 Score =  176 bits (445), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 61/262 (23%), Positives = 100/262 (38%), Gaps = 12/262 (4%)

Query: 4   VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA    +  AW+    PD + LQE K ++ + P E      Y +     
Sbjct: 1   MKLISWNVNGLRAVAAKDGFAWVSGLKPDFLGLQEIKVKEADVPSEI-----YKLGFNEI 55

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
              + V             +                       + + N+Y P+G      
Sbjct: 56  SVNSAVRAGYSGVMSLSKFNTATQKSLFFNDDEGRVLEHRFGNVALFNIYFPNGQ-KDDA 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +   K+ +  +FL +    +     +IF GD N   +  D  NP      + F    R  
Sbjct: 115 RLAYKMDFYAKFLAYIDALVAQGLDVIFCGDVNTAHREIDLKNPKANAKTSGFLPIERAW 174

Query: 183 FQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             ++   GF D  R  H D    YS+W Y  ++ +KN G RID+  +S    + L  A I
Sbjct: 175 LDEVVAHGFIDTFRQAHGDVADAYSWWSYRFNARAKNVGWRIDYFFISQSLKNRLKDAFI 234

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
                G    SDH PV + +++
Sbjct: 235 LDNIGG----SDHCPVGIEIEL 252


>gi|329120764|ref|ZP_08249426.1| exodeoxyribonuclease III [Neisseria bacilliformis ATCC BAA-1200]
 gi|327460561|gb|EGF06897.1| exodeoxyribonuclease III [Neisseria bacilliformis ATCC BAA-1200]
          Length = 258

 Score =  175 bits (444), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 65/264 (24%), Positives = 119/264 (45%), Gaps = 13/264 (4%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59
           ++ + + NVN IR+        +I  +  DI+C+QE K ++ +   E         H   
Sbjct: 1   MLKIVSANVNGIRSAYKKGFLDYIAASGADIVCVQELKAQEADLAPEMKNPHGMYGHWHC 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             ++ Y+GVA+ SK  P  +   +  ++ D + RF+   F      L + +LYLP G+  
Sbjct: 61  AEKRGYSGVAVYSKRAPDRVQVGMGVEEFDREGRFVRCDFG----NLSVISLYLPSGSSA 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +          F    +        ++  GD+NI  Q  D  N    + ++ F  E 
Sbjct: 117 EERQQAKFRFLDV-FYPMLADLKAEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEE 175

Query: 180 RQSF-QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R+   + + ++G+TD  R  +  H  Y++W     +++K+ G RID+ M++PE  +   +
Sbjct: 176 REWIGKVINDLGWTDIWRTLYPDHPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKALN 235

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
           A +        K SDH P++V  D
Sbjct: 236 AHVYKD----EKFSDHAPLVVEYD 255


>gi|42524876|ref|NP_970256.1| exodeoxyribonuclease III [Bdellovibrio bacteriovorus HD100]
 gi|39577087|emb|CAE78316.1| Exodeoxyribonuclease III [Bdellovibrio bacteriovorus HD100]
          Length = 285

 Score =  175 bits (444), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 73/265 (27%), Positives = 114/265 (43%), Gaps = 13/265 (4%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC- 60
            V + +WNVN IRA     L  ++    PDI C+QETK        E  +    H     
Sbjct: 30  TVKIISWNVNGIRACHKKGLLDFVNREKPDIFCIQETKAHIDQVENELKKLTWNHSYWSS 89

Query: 61  -GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GVA     +P  +       + + + R I +          + N+Y P+G   
Sbjct: 90  AVKKGYSGVATFVNEEPKSVEYGWGISEYESEGRIIISDHG----PFDLYNIYFPNGGSG 145

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                + K  ++K       ++L     ++  GDYN+  +  D ++P+     + F  E 
Sbjct: 146 DVRH-NFKQQFLKDLNHHLKEKLATGRQVVVVGDYNVAHEAIDVHDPVRLSKVSGFFPEE 204

Query: 180 RQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R  F    ++GF D  R    +    YS+WDY   +   N+G RID+I +S      L S
Sbjct: 205 RAWFDSFVDLGFIDTFRYFKPSEAKRYSWWDYRQMARISNRGWRIDYICVSKGLEKYLAS 264

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263
           A I  +  G    SDH PV+ +LDI
Sbjct: 265 ADILDQVEG----SDHCPVVATLDI 285


>gi|318062091|ref|ZP_07980812.1| exodeoxyribonuclease III [Streptomyces sp. SA3_actG]
 gi|318079946|ref|ZP_07987278.1| exodeoxyribonuclease III [Streptomyces sp. SA3_actF]
          Length = 261

 Score =  175 bits (444), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 54/261 (20%), Positives = 94/261 (36%), Gaps = 8/261 (3%)

Query: 10  NVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG--QKSYN 66
           NVN +RA        W+   + D++CLQE + E    P E  +   +         K   
Sbjct: 2   NVNGLRAAAKKGFTEWLAGTSADVLCLQEVRAEAHQLPEEVARPEGWFSLHAPAADKGRA 61

Query: 67  GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDD 126
           GV++ ++ +P  + T     + D   R++EA     T    +       G      KY  
Sbjct: 62  GVSLYTRREPDRVRTGFGSAEFDGSGRYVEADLPGVTVA-SLYLPSGEVGTERQEQKYRF 120

Query: 127 KISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL 186
              ++        +       ++  GD+NI     D  N      +A F  E R+   ++
Sbjct: 121 MDEFLTYLKELRERAAAEGREVLVCGDWNIAHTEADLKNWRGNRKNAGFLPEEREWLSRV 180

Query: 187 QN----MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
            +                    YS+W Y   ++  + G RID+ M S         A ++
Sbjct: 181 LDPADGGYVDVVRAQHAGVEGPYSWWSYRGRAFDNDTGWRIDYHMASAGLAGRALKAEVE 240

Query: 243 TKPRGWTKPSDHTPVIVSLDI 263
                  + SDH PV V+ ++
Sbjct: 241 RAATHEERWSDHAPVTVTYEM 261


>gi|78486391|ref|YP_392316.1| exonuclease III [Thiomicrospira crunogena XCL-2]
 gi|78364677|gb|ABB42642.1| Exodeoxyribonuclease III [Thiomicrospira crunogena XCL-2]
          Length = 273

 Score =  175 bits (444), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 69/272 (25%), Positives = 115/272 (42%), Gaps = 13/272 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++NVNS+R R+H L A      PDII LQETK +D  FP   ++++ YH    GQK
Sbjct: 1   MKIVSFNVNSVRMRLHQLQALTDSYAPDIIGLQETKVQDHEFPLADIEAMGYHAIYMGQK 60

Query: 64  SYNGVAI---LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           ++ GVAI    S              +   +   +          +R+ N Y P G   +
Sbjct: 61  THYGVAILYKKSLVLKASQYGWSHDGEDAQKRIIMADFEDQKGNDVRVINGYFPQGENRS 120

Query: 121 STK-YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDA 173
               +  K ++ +  + +  +    E+ L+  GD+NI P+              + +   
Sbjct: 121 HPIKFPAKEAFYQDLMTYLKEECSPEQNLVVIGDFNISPEDKDIGIGEPNRKRWLRDGKT 180

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHL-YSFWDYYADSW--SKNKGIRIDHIMLSP 230
            F  E R+ +  L   G  D  R  H      +S++DY +  +     +G+RID ++ + 
Sbjct: 181 SFLPEEREWWATLIGWGLKDTYRKVHPEEDRIFSWFDYRSKGFDAEPKRGLRIDTVLATK 240

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
             T     + +    RG  KPSDH PV     
Sbjct: 241 CLTEKAVDSGVAYDIRGMVKPSDHAPVWTEFK 272


>gi|221194898|ref|ZP_03567954.1| exodeoxyribonuclease III [Atopobium rimae ATCC 49626]
 gi|221184801|gb|EEE17192.1| exodeoxyribonuclease III [Atopobium rimae ATCC 49626]
          Length = 281

 Score =  175 bits (444), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 70/263 (26%), Positives = 114/263 (43%), Gaps = 15/263 (5%)

Query: 5   TVATWNVNSIRARIHN---LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
             A+WNVN +RA +          +  + DI  LQETK ++     + + S         
Sbjct: 30  KFASWNVNGLRAVLKKDPSFTEIFETIDADIFALQETKLQEGQVDLD-IPSYFQTWNYAE 88

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G A+ S+ +P++++  +     D + R     F       R   + +   N    
Sbjct: 89  RKGYSGTAVFSREEPLQVIRQIGSPVADNEGRVCALEFD------RFWFVDVYTPNSKEQ 142

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
               D+        R     L  ++PLI  GD+N+     D  NP     +A F+ E R+
Sbjct: 143 LARLDERLVWDERYRDFIAELSAQKPLITCGDFNVAHTEIDLKNPSSNHKNAGFSDEERE 202

Query: 182 SFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           SF KL + GFTD  R  H      YS+W Y  ++   N G RID+ ++S      +  A 
Sbjct: 203 SFTKLLDAGFTDTFRYRHPDVTGAYSWWSYRFNARKNNAGWRIDYFLVSNRIAQQITGAA 262

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263
           I  +  G    SDH PV +++++
Sbjct: 263 ILNEVYG----SDHCPVELTIEL 281


>gi|189485031|ref|YP_001955972.1| exodeoxyribonuclease III [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|170286990|dbj|BAG13511.1| exodeoxyribonuclease III [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
          Length = 251

 Score =  175 bits (444), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 78/260 (30%), Positives = 121/260 (46%), Gaps = 14/260 (5%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC-- 60
           + + +WNVN IRA    +  AW K+ N DI+C+QETK  +  FP +  +   Y+      
Sbjct: 1   MKIVSWNVNGIRAIYKKDFTAWFKDENADIVCVQETKAGETQFPKDIKEINGYNFYCSSA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GVA+ SK +P  ++  +     D + R I   F        I N+Y P+G   +
Sbjct: 61  EKKGYSGVAVWSKIKPDFVIASIENKVFDNEGRIIRLDFK----DFIIFNVYFPNGG-AS 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   K+ +    +++  Q    ++ +I  GDYN      D   P   E  + F  E R
Sbjct: 116 QERLKYKMEFYDYLIKYLKQFK--DKTVIICGDYNTAHFSIDLARPKENEKVSGFMPEER 173

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           +    L + GF D  R  +     Y++WDY   + S+N G RIDH  +S  +   L SA 
Sbjct: 174 EKLDNLVSSGFIDTFRYFNKEPGNYTWWDYKTAARSRNIGWRIDHFFMSQHSVKRLKSAD 233

Query: 241 IDTKPRGWTKPSDHTPVIVS 260
           I     G    SDH PV ++
Sbjct: 234 IKKSVSG----SDHCPVSIT 249


>gi|139439406|ref|ZP_01772847.1| Hypothetical protein COLAER_01867 [Collinsella aerofaciens ATCC
           25986]
 gi|133775185|gb|EBA39005.1| Hypothetical protein COLAER_01867 [Collinsella aerofaciens ATCC
           25986]
          Length = 272

 Score =  175 bits (444), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 68/272 (25%), Positives = 115/272 (42%), Gaps = 18/272 (6%)

Query: 5   TVATWNVNSIRARIHN---LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           T A+WNVN +RA +          +E + DI+ LQETK ++     + L   +       
Sbjct: 6   TFASWNVNGLRAVLKKDPSFIQIAQELDVDILALQETKLQEGQVDID-LPGYHQTWSYAE 64

Query: 62  QKSYNGVAILSKYQPIEIVT---------HLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           +K Y+G A+ S+ +P+ ++                L  QA        +        ++Y
Sbjct: 65  RKGYSGTAVFSRQEPLRVLRADALLPYAGGGEAAVLVAQAATEGRVCALEFDKFWFVDVY 124

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
            P+     +                 +   E  +P++  GD+N+  +  D  NP     +
Sbjct: 125 TPNAQNELARIDVRMAWDDAYRGFLNALERETGKPVVTCGDFNVAHEEIDLKNPKSNRGN 184

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
           A F+ E R  F +L N GFTD  RA +     +YS+W Y  ++   N G RID+ ++S  
Sbjct: 185 AGFSDEERGKFTELLNAGFTDTWRAANPDVEGVYSWWSYRFNARKNNAGWRIDYFLVSDS 244

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             + +    I    RG    SDH PV ++L++
Sbjct: 245 IAANVRDTGI----RGDIFGSDHCPVTLTLEL 272


>gi|121613613|ref|YP_999970.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|121504268|gb|EAQ73304.2| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni
           81-176]
          Length = 259

 Score =  175 bits (444), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 62/264 (23%), Positives = 98/264 (37%), Gaps = 12/264 (4%)

Query: 2   SVVTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
            ++ + +WNVN +RA    N   WI +   D I  QE K  +  FP +  +    H+   
Sbjct: 6   KIMKLLSWNVNGLRAICDKNALDWIAQEKIDFIGFQEIKAHEDKFPKKIYEYPFKHMYFN 65

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
             K      ++S       V      D +           I    +   N          
Sbjct: 66  SAKRAGYSGVMSLCNFDSEVKKCEFFDDEEGRVLEHRFKNIALFNIYFPN------GQKD 119

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             + + K+ +   FL +  + L+    +I  GD N   +  D  +P    N + F    R
Sbjct: 120 EERLNFKMKFYADFLVYLDKLLKDGFEIIICGDVNTAHKEIDLTHPKANANTSGFLPIER 179

Query: 181 QSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
                L  +GF D  R  + +    YS+W Y   +  +N G RID+  +S      L +A
Sbjct: 180 AWIDDLLKLGFIDTFREINGEIKEKYSWWSYRMKARERNVGWRIDYFFISKGLKDKLKNA 239

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
            I     G    SDH PV + +DI
Sbjct: 240 FIRDDIFG----SDHAPVGIEIDI 259


>gi|324998398|ref|ZP_08119510.1| exodeoxyribonuclease III Xth [Pseudonocardia sp. P1]
          Length = 287

 Score =  175 bits (444), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 76/265 (28%), Positives = 128/265 (48%), Gaps = 8/265 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFE---TLQSLNYHIETC 60
           + +ATWNVNS ++R+  L  W+ E +PD++CLQETK  D +F       L +  Y +   
Sbjct: 1   MRLATWNVNSAKSRLPRLLPWLDERDPDVVCLQETKLSDDDFAATFDDELAARGYAVAHH 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT---FTINTQTLRIGNLYLPHGN 117
           GQ  +NGVA+LS+    ++V  LPG+ +  +           T     LR+ ++Y+P+G 
Sbjct: 61  GQGRWNGVAVLSRVGLDDVVRGLPGEPVFSEGGLDVPDARAVTATCGGLRVTSVYVPNGR 120

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
             +   Y  K+ W+                 + AGD NI P   D ++   ++     T 
Sbjct: 121 EPSDPHYAYKLRWLAA--LRDQVVAGDPATTVVAGDVNIAPTDDDVWDRSQFDGATHVTP 178

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
             R++   L   G  D +R       ++++WDY A  + +++G+RID ++   +      
Sbjct: 179 AEREALAGLVGAGLHDVLRDRWPDERVFTYWDYRAGRFHQDQGMRIDLVLAGEDPAGRRA 238

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLD 262
           +  +D K R    PSDH PV++ LD
Sbjct: 239 AVWVDRKARKGRSPSDHAPVVLDLD 263


>gi|238028924|ref|YP_002913155.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           glumae BGR1]
 gi|237878118|gb|ACR30451.1| Endonuclease/exonuclease/phosphatase family protein [Burkholderia
           glumae BGR1]
          Length = 256

 Score =  175 bits (444), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 60/264 (22%), Positives = 107/264 (40%), Gaps = 14/264 (5%)

Query: 3   VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59
           ++ V T N+N IR A       W+ +   D +C+QE K    + P E      +  +   
Sbjct: 1   MLRVITANLNGIRSAAKKGFFDWLGDQQADCVCVQEIKVSADDLPAEFAAPHGFTGYFHH 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G  + ++ +P +++      + D + R++EA F      L + ++Y+P G+  
Sbjct: 61  AQKKGYSGAGLYTRREPDDVIIGYGSSEFDAEGRYVEARFG----KLSVVSVYVPSGSSG 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +                  L+    +I  GD NI+ +  D  N    + ++    E 
Sbjct: 117 DERQQA--KYRFMNEFMPHLAELKATREVIVCGDVNIVHKEIDIRNWKSNQKNSGCLPEE 174

Query: 180 RQSFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R    KL +  G+ D  R        Y++W     +++KN G RID+ + +P        
Sbjct: 175 RAWLTKLFDEVGYVDVFRTLDPRPDQYTWWSNRGQAYAKNVGWRIDYQIATPGVAGTAKQ 234

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
             I        K SDH P+ V  D
Sbjct: 235 TSIFRDI----KFSDHAPLTVDYD 254


>gi|224438361|ref|ZP_03659288.1| exodeoxyribonuclease LexA [Helicobacter cinaedi CCUG 18818]
 gi|313144803|ref|ZP_07806996.1| exodeoxyribonuclease LexA [Helicobacter cinaedi CCUG 18818]
 gi|313129834|gb|EFR47451.1| exodeoxyribonuclease LexA [Helicobacter cinaedi CCUG 18818]
          Length = 251

 Score =  175 bits (444), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 72/262 (27%), Positives = 118/262 (45%), Gaps = 13/262 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      +  E N DI C+QE+K +     F   Q  + +  +  +
Sbjct: 1   MKLISWNVNGLRACMNKGFMDFFNEVNADIFCIQESKMQKDQGDFS-FQGYSEYWNSAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+GV +LSK +P+++   +     D + R I A +       R   + +   N     
Sbjct: 60  KGYSGVVVLSKIKPLQVTYDMGISHHDKEGRIITAEYE------RFYLVNVYTPNAKREL 113

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +  +     +   R   ++L+  +P++  GD N+  +  D  NP     +A FT E R  
Sbjct: 114 ERLEYRMEWEDDFRAFVKKLKKHKPVVICGDLNVAHKEIDLKNPKTNRRNAGFTDEERGK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             +L   GF D  R  + T    YS+W Y   +   N G RID+ + S    S L  A+I
Sbjct: 174 MSELLESGFIDTFRHFYPTLEGAYSWWSYMGKARENNTGWRIDYFLCSTSLESHLKDAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
                G    SDH PV +S+D+
Sbjct: 234 YPHIFG----SDHCPVGLSMDM 251


>gi|88703392|ref|ZP_01101108.1| Exodeoxyribonuclease III [Congregibacter litoralis KT71]
 gi|88702106|gb|EAQ99209.1| Exodeoxyribonuclease III [Congregibacter litoralis KT71]
          Length = 266

 Score =  175 bits (444), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 66/267 (24%), Positives = 119/267 (44%), Gaps = 13/267 (4%)

Query: 1   MSVVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           +S   + ++N N IRA        W+   NPD++C+QETK +      E      YH   
Sbjct: 5   LSTARIVSFNANGIRAASRKGFFDWMARFNPDVVCVQETKAQAHQLTDEVFHPRGYHCIY 64

Query: 60  CG--QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
               +K Y+G A+ S+ +P  + T L  + +D + R+++  F      L + +LY+P G+
Sbjct: 65  NDAVKKGYSGTAVYSRVKPRAVTTQLGWEPVDSEGRYLQCDFDG----LSVISLYVPSGS 120

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
              +   + K ++++ F              I   D+N   Q  D  N    + ++ F  
Sbjct: 121 SSDAA-LEKKFTFMELFYEHLRALKRKRRDFIICADWNTCHQNIDLRNWKPNQKNSGFLP 179

Query: 178 EVRQSFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
           E R    ++ +  GF D+ R        Y++W     +W+ N G R+D+ M++P+    +
Sbjct: 180 EERAWLDRIYDEIGFVDSFRVIDKEPDRYTWWSNRGQAWANNVGWRLDYQMITPKLVPAV 239

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263
            +A I T  R     SDH P ++   +
Sbjct: 240 RAASIYTDER----FSDHAPQVMEYAL 262


>gi|312140778|ref|YP_004008114.1| exodeoxyribonuclease iii [Rhodococcus equi 103S]
 gi|325675582|ref|ZP_08155266.1| exodeoxyribonuclease III [Rhodococcus equi ATCC 33707]
 gi|311890117|emb|CBH49435.1| exodeoxyribonuclease III [Rhodococcus equi 103S]
 gi|325553553|gb|EGD23231.1| exodeoxyribonuclease III [Rhodococcus equi ATCC 33707]
          Length = 275

 Score =  175 bits (444), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 69/266 (25%), Positives = 106/266 (39%), Gaps = 14/266 (5%)

Query: 6   VATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL--NYHIETCGQ 62
           + T NVN +RA     L  W+  +  D++CLQET+  DK        +L   +H+ +   
Sbjct: 13  ITTVNVNGVRAAARKGLIDWLAGSQADVVCLQETRASDKQLHETLAPALDQGWHVASAEP 72

Query: 63  --KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
             K  NGVA+LS+     +      D+     R+IEA F      L +G+LYLP G   T
Sbjct: 73  SAKGRNGVAVLSRRPADAVRIGFGDDEFADAGRYIEADFDA----LTVGSLYLPTGEAET 128

Query: 121 STKYD---DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
             +        S+       A   +     ++  GD+NI     D  N       + F  
Sbjct: 129 PKQEQKERFMASFAAHLSASAEAAVAAGRDVLVCGDWNIAHTERDIKNWKGNVKKSGFLP 188

Query: 178 EVRQSFQKLQNMGFTDAIRA--THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
             R     L   G    +      D    YS+W Y   ++  + G RID+ + +P   + 
Sbjct: 189 GERDWVGALLAGGAWVDVVRELHPDVDGPYSWWSYRGKAFDTDAGWRIDYHLTTPGLAAR 248

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
              AR++       + SDH PV V  
Sbjct: 249 AKEARVERAATYAERWSDHAPVTVQF 274


>gi|261365939|ref|ZP_05978822.1| exodeoxyribonuclease III [Neisseria mucosa ATCC 25996]
 gi|288565482|gb|EFC87042.1| exodeoxyribonuclease III [Neisseria mucosa ATCC 25996]
          Length = 259

 Score =  175 bits (444), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 60/264 (22%), Positives = 112/264 (42%), Gaps = 13/264 (4%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++ + + NVN IR+        +I  +  DI+C+QE K ++ +   E       H     
Sbjct: 1   MLKIISANVNGIRSAYKKGFYEYIATSGADIVCVQELKAQEADLSDEMKNPHGMHGHWHC 60

Query: 62  --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             ++ Y+GVA+ SK  P  +   +  ++ D + RF+   F   +                
Sbjct: 61  AEKRGYSGVAVYSKRAPDNVQIGMGIEEFDREGRFVRCDFGKLSVI-----SLYLPSGTS 115

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              + + K  ++  F             ++  GD+NI  Q  D  N    + ++ F  E 
Sbjct: 116 APERQELKYRFLDAFYPMLEAMKAEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEE 175

Query: 180 RQSF-QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R+   + +  +G+TD  R  +  +  Y++W     +++K+ G RID+ M++PE      S
Sbjct: 176 REWIGKVIHTLGWTDMWRTLYPDNPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAVKAVS 235

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
           A +        K SDH P++V  D
Sbjct: 236 AHVYKD----EKFSDHAPLVVEYD 255


>gi|330429606|gb|AEC20940.1| catabolite repression control protein [Pusillimonas sp. T7-7]
          Length = 260

 Score =  175 bits (444), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 68/267 (25%), Positives = 125/267 (46%), Gaps = 15/267 (5%)

Query: 3   VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IET 59
           ++ V + N+N IR A       W+ + N D IC+QE K +  N   + L    Y+     
Sbjct: 1   MLRVISANLNGIRSAVRKGFLDWVPQQNADFICMQELKAQADNMTADMLNPEGYYGYFHY 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GV + ++ QP++++  L   ++D + R++E  +      L + ++YLP G+  
Sbjct: 61  AEKKGYSGVGLYARQQPLQVIQGLGVPEIDAEGRYLELVYD----KLSVISVYLPSGS-S 115

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +   K  +++ F +  S+  +    ++  GD+NI  Q  D  N      ++ F  E 
Sbjct: 116 GDHRQAAKFVFMEHFFKHLSELAQCGRQVVLCGDWNIAHQEIDLKNWKGNLKNSGFLPEE 175

Query: 180 RQSFQKLQNM-GFTDAIRATHDT--HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
           R    ++ +  G+ D  R+ +       Y++W     +W+KN G RID+ + SPE  +  
Sbjct: 176 RAWLTRVFDEIGWVDVYRSLYPDATGEAYTWWSNRGQAWAKNVGWRIDYQIASPEIAATA 235

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263
            +A I    R     SDH P+ +  D 
Sbjct: 236 KTASIYKDER----FSDHAPLTIDYDW 258


>gi|319785778|ref|YP_004145253.1| exodeoxyribonuclease III Xth [Pseudoxanthomonas suwonensis 11-1]
 gi|317464290|gb|ADV26022.1| exodeoxyribonuclease III Xth [Pseudoxanthomonas suwonensis 11-1]
          Length = 270

 Score =  175 bits (444), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 66/275 (24%), Positives = 114/275 (41%), Gaps = 25/275 (9%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + ++N N IR+        W+ + + D++CLQETK+++        +   +H      
Sbjct: 1   MRIISFNANGIRSASSKGFFDWLGQQDADVVCLQETKSQEHQLADACFRPDGHHCFYRDA 60

Query: 62  --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GVAI ++ +P E+ T L   D D + R+IEA F      L + + Y+P G+  
Sbjct: 61  TTKKGYSGVAIYARREPDEVRTVLGRPDFDDEGRYIEARFG----NLSVVSFYIPSGS-S 115

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +   K   ++       + L      +  GD+NI+    D  N    + ++      
Sbjct: 116 GELRQGYKFQIMEWLKPVLDEWLASGREYVLCGDWNIVRCRKDIRNWTSNQKNSGCLPPE 175

Query: 180 RQSFQKLQN------------MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227
           R     +               G+ DA RA H     Y++W     + + N G RID+  
Sbjct: 176 RAWLNGMIGPDEGSDGTPPRPGGWVDAYRALHPQGEDYTWWSNRGAARANNVGWRIDYQF 235

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
           ++P   S L    I  + R     SDH P  V  +
Sbjct: 236 VTPGLGSRLRGCSIYREQR----FSDHAPFTVDYE 266


>gi|261416712|ref|YP_003250395.1| exodeoxyribonuclease III Xth [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261373168|gb|ACX75913.1| exodeoxyribonuclease III Xth [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302325662|gb|ADL24863.1| exodeoxyribonuclease III [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 265

 Score =  175 bits (444), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 67/269 (24%), Positives = 107/269 (39%), Gaps = 15/269 (5%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN IR+ +      W    +PDI+CLQE + E      E      Y+      
Sbjct: 1   MKIYSWNVNGIRSVLKKGFEDWFSATDPDILCLQEVRAEKNQV-SEIATREGYYTYWNAC 59

Query: 63  KS---YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
           K    Y+GVA+ SK +P  +      ++ D + R ++  F        + N         
Sbjct: 60  KRKKGYSGVAVYSKIEPDAVNYGFDIEEFDEEGRVLQLVFPDW-----VLNCIYFPNGGQ 114

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              + D K+ +   FL  + Q L   + ++  GDYN   +  D   P   EN + F    
Sbjct: 115 GDDRLDYKLRFYDAFLENSKQWLADGKHVVTVGDYNTCHKEIDIARPKENENVSGFLPIE 174

Query: 180 RQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R    K    GF D  R  H      YS+W     +  +N G R+D+  +       + S
Sbjct: 175 RAWMDKYVENGFVDTFRTLHPDTRDAYSWWSNRFGARERNVGWRLDYGFVDAALMPNVVS 234

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIPEPR 267
           + I +   G    SDH P+ + L+ P   
Sbjct: 235 SEILSNVMG----SDHCPISLELEPPFAP 259


>gi|300313958|ref|YP_003778050.1| exodeoxyribonuclease III protein [Herbaspirillum seropedicae SmR1]
 gi|300076743|gb|ADJ66142.1| exodeoxyribonuclease III protein [Herbaspirillum seropedicae SmR1]
          Length = 258

 Score =  175 bits (444), Expect = 5e-42,   Method: Composition-based stats.
 Identities = 64/263 (24%), Positives = 114/263 (43%), Gaps = 15/263 (5%)

Query: 5   TVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETCG 61
            + + N+N IR A       W+++  PD +C+QE K +  +   + L    Y  H     
Sbjct: 3   KIVSANLNGIRSAAKKGFFEWLQKEAPDFVCVQELKAQAADMTEQFLAPAGYVGHFHYAQ 62

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+GV + S+ QP  +       + D + R++E  +      L + +LY P G+    
Sbjct: 63  KKGYSGVGVYSRRQPDSVRIGFGNTEFDDEGRYVECDYG----DLTVISLYAPSGSSSEE 118

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
              + K  +++ FL    +  +    ++  GD+NI  +  D  N    + ++ F  E R 
Sbjct: 119 R-QEAKFRFMEAFLPHLMELEKSGREVVICGDWNIAHKEIDLKNWKSNQKNSGFLPEERA 177

Query: 182 SFQKLQNM-GFTDAIRATHDTH--HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
              ++ +  G  D  R  H       Y++W     +W+ N G RID+ + +P   +   S
Sbjct: 178 WMTRIFDQLGLVDVYRRLHPETTGEAYTWWSNRGQAWANNVGWRIDYHVSTPGIAAKAVS 237

Query: 239 ARIDTKPRGWTKPSDHTPVIVSL 261
           A I  + R     SDH P+ V  
Sbjct: 238 AAIYKEQR----FSDHAPLTVVY 256


>gi|255036745|ref|YP_003087366.1| exodeoxyribonuclease III Xth [Dyadobacter fermentans DSM 18053]
 gi|254949501|gb|ACT94201.1| exodeoxyribonuclease III Xth [Dyadobacter fermentans DSM 18053]
          Length = 254

 Score =  175 bits (444), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 72/262 (27%), Positives = 113/262 (43%), Gaps = 13/262 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH---IET 59
           + + T+N+N IRA +   L  W++    DI+C QE K           ++L Y       
Sbjct: 1   MQILTYNLNGIRAALKNGLLDWLQTTPADILCFQEVKATPDVVDLSGFRALGYELAGWHA 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GVAI SK QP  +V        D + R + A F   T                
Sbjct: 61  AEKKGYSGVAIFSKIQPDRVVMGCDIPAYDAEGRVLRADFGDLTV-----LNCYFPSGTS 115

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +   K+ ++  FL + ++  +    LI  GDYNI     D ++P+  +  + F  E 
Sbjct: 116 GDVRQSVKMRFLTDFLVWVNELRKERPNLIICGDYNIAHTEIDIHDPVRNQKSSGFLPEE 175

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R    +  + G+TDA R  + T   YS+W Y A +   NKG RID+I +S      + ++
Sbjct: 176 RAWMTEWFSNGYTDAFRFMNPTLRQYSWWTYRAGARGNNKGWRIDYISVSEPLKFRIIAS 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261
           R           SDH PV + +
Sbjct: 236 RQYNDA----VHSDHCPVWLEI 253


>gi|62290851|ref|YP_222644.1| exodeoxyribonuclease III [Brucella abortus bv. 1 str. 9-941]
 gi|82700763|ref|YP_415337.1| AP endonuclease [Brucella melitensis biovar Abortus 2308]
 gi|225853439|ref|YP_002733672.1| exodeoxyribonuclease III [Brucella melitensis ATCC 23457]
 gi|254690141|ref|ZP_05153395.1| Exodeoxyribonuclease III [Brucella abortus bv. 6 str. 870]
 gi|254694631|ref|ZP_05156459.1| Exodeoxyribonuclease III [Brucella abortus bv. 3 str. Tulya]
 gi|254696256|ref|ZP_05158084.1| Exodeoxyribonuclease III [Brucella abortus bv. 2 str. 86/8/59]
 gi|254707472|ref|ZP_05169300.1| Exodeoxyribonuclease III [Brucella pinnipedialis M163/99/10]
 gi|254731174|ref|ZP_05189752.1| Exodeoxyribonuclease III [Brucella abortus bv. 4 str. 292]
 gi|256045604|ref|ZP_05448484.1| Exodeoxyribonuclease III [Brucella melitensis bv. 1 str. Rev.1]
 gi|256112331|ref|ZP_05453252.1| Exodeoxyribonuclease III [Brucella melitensis bv. 3 str. Ether]
 gi|256258395|ref|ZP_05463931.1| Exodeoxyribonuclease III [Brucella abortus bv. 9 str. C68]
 gi|256263081|ref|ZP_05465613.1| exodeoxyribonuclease III [Brucella melitensis bv. 2 str. 63/9]
 gi|260546115|ref|ZP_05821855.1| exodeoxyribonuclease III [Brucella abortus NCTC 8038]
 gi|260562912|ref|ZP_05833398.1| exodeoxyribonuclease III [Brucella melitensis bv. 1 str. 16M]
 gi|260755677|ref|ZP_05868025.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 6 str. 870]
 gi|260758902|ref|ZP_05871250.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 4 str. 292]
 gi|260760626|ref|ZP_05872969.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 2 str. 86/8/59]
 gi|260884704|ref|ZP_05896318.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 9 str. C68]
 gi|261214952|ref|ZP_05929233.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 3 str. Tulya]
 gi|261314960|ref|ZP_05954157.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis M163/99/10]
 gi|265992027|ref|ZP_06104584.1| exodeoxyribonuclease III Xth [Brucella melitensis bv. 1 str. Rev.1]
 gi|265993764|ref|ZP_06106321.1| exodeoxyribonuclease III Xth [Brucella melitensis bv. 3 str. Ether]
 gi|62196983|gb|AAX75283.1| Xth-2, exodeoxyribonuclease III [Brucella abortus bv. 1 str. 9-941]
 gi|82616864|emb|CAJ11960.1| AP endonuclease, family 1:Exodeoxyribonuclease III
           xth:Endonuclease/exonuclease/phosphatase family
           [Brucella melitensis biovar Abortus 2308]
 gi|225641804|gb|ACO01718.1| exodeoxyribonuclease III [Brucella melitensis ATCC 23457]
 gi|260096222|gb|EEW80098.1| exodeoxyribonuclease III [Brucella abortus NCTC 8038]
 gi|260152928|gb|EEW88020.1| exodeoxyribonuclease III [Brucella melitensis bv. 1 str. 16M]
 gi|260669220|gb|EEX56160.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 4 str. 292]
 gi|260671058|gb|EEX57879.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 2 str. 86/8/59]
 gi|260675785|gb|EEX62606.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 6 str. 870]
 gi|260874232|gb|EEX81301.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 9 str. C68]
 gi|260916559|gb|EEX83420.1| exodeoxyribonuclease III Xth [Brucella abortus bv. 3 str. Tulya]
 gi|261303986|gb|EEY07483.1| exodeoxyribonuclease III Xth [Brucella pinnipedialis M163/99/10]
 gi|262764745|gb|EEZ10666.1| exodeoxyribonuclease III Xth [Brucella melitensis bv. 3 str. Ether]
 gi|263003093|gb|EEZ15386.1| exodeoxyribonuclease III Xth [Brucella melitensis bv. 1 str. Rev.1]
 gi|263092973|gb|EEZ17134.1| exodeoxyribonuclease III [Brucella melitensis bv. 2 str. 63/9]
 gi|326410001|gb|ADZ67066.1| Exodeoxyribonuclease III [Brucella melitensis M28]
 gi|326539718|gb|ADZ87933.1| exodeoxyribonuclease III [Brucella melitensis M5-90]
          Length = 268

 Score =  175 bits (444), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 76/266 (28%), Positives = 122/266 (45%), Gaps = 9/266 (3%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64
           +ATWN+NS+R R+  +  ++++  PD++CLQETK  D  FP +  ++L Y HI   GQK 
Sbjct: 5   IATWNINSVRLRMPLVEQFLRDYQPDVLCLQETKCPDDLFPAKGFRALGYEHIAISGQKG 64

Query: 65  YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124
           Y+GVA +S+     +             R + A      + LRI N Y+P G      + 
Sbjct: 65  YHGVATVSRRPLDGVEK--VDFCNMGDCRHLSAVVEAGDRKLRIHNFYVPAGGDEPDPEI 122

Query: 125 DDKISWIKRF---LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180
           + K +    F   +R      +     +  GD NI P  +D ++          T  E  
Sbjct: 123 NPKFAHKLAFLEEMRAIIADRKDGCSSLLVGDLNIAPLENDVWSHKQLLKIVSHTPIETE 182

Query: 181 QSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHS 238
                    G++D +R        +Y++W Y A  W   ++G R+DH+  S +  S    
Sbjct: 183 TLEDLRIKGGWSDLMRHLIAADQKIYTWWSYRAKDWDAADRGRRLDHVWGSADLESHNKG 242

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIP 264
            ++    RGW +PSDH PVI + D+ 
Sbjct: 243 LQVLRDARGWDRPSDHVPVIATFDLD 268


>gi|17986352|ref|NP_538986.1| exodeoxyribonuclease III [Brucella melitensis bv. 1 str. 16M]
 gi|189025067|ref|YP_001935835.1| Exodeoxyribonuclease III [Brucella abortus S19]
 gi|237816360|ref|ZP_04595353.1| exodeoxyribonuclease III (xth) [Brucella abortus str. 2308 A]
 gi|297247235|ref|ZP_06930953.1| exodeoxyribonuclease III [Brucella abortus bv. 5 str. B3196]
 gi|17981940|gb|AAL51250.1| exodeoxyribonuclease iii [Brucella melitensis bv. 1 str. 16M]
 gi|189020639|gb|ACD73361.1| Exodeoxyribonuclease III [Brucella abortus S19]
 gi|237788427|gb|EEP62642.1| exodeoxyribonuclease III (xth) [Brucella abortus str. 2308 A]
 gi|297174404|gb|EFH33751.1| exodeoxyribonuclease III [Brucella abortus bv. 5 str. B3196]
          Length = 289

 Score =  175 bits (444), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 76/266 (28%), Positives = 122/266 (45%), Gaps = 9/266 (3%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64
           +ATWN+NS+R R+  +  ++++  PD++CLQETK  D  FP +  ++L Y HI   GQK 
Sbjct: 26  IATWNINSVRLRMPLVEQFLRDYQPDVLCLQETKCPDDLFPAKGFRALGYEHIAISGQKG 85

Query: 65  YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124
           Y+GVA +S+     +             R + A      + LRI N Y+P G      + 
Sbjct: 86  YHGVATVSRRPLDGVEK--VDFCNMGDCRHLSAVVEAGDRKLRIHNFYVPAGGDEPDPEI 143

Query: 125 DDKISWIKRF---LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180
           + K +    F   +R      +     +  GD NI P  +D ++          T  E  
Sbjct: 144 NPKFAHKLAFLEEMRAIIADRKDGCSSLLVGDLNIAPLENDVWSHKQLLKIVSHTPIETE 203

Query: 181 QSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHS 238
                    G++D +R        +Y++W Y A  W   ++G R+DH+  S +  S    
Sbjct: 204 TLEDLRIKGGWSDLMRHLIAADQKIYTWWSYRAKDWDAADRGRRLDHVWGSADLESHNKG 263

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIP 264
            ++    RGW +PSDH PVI + D+ 
Sbjct: 264 LQVLRDARGWDRPSDHVPVIATFDLD 289


>gi|313680366|ref|YP_004058105.1| exodeoxyribonuclease III xth [Oceanithermus profundus DSM 14977]
 gi|313153081|gb|ADR36932.1| exodeoxyribonuclease III Xth [Oceanithermus profundus DSM 14977]
          Length = 252

 Score =  175 bits (443), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 63/262 (24%), Positives = 112/262 (42%), Gaps = 12/262 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + +A+WNVN +RA +       ++  + D++ LQE + E+     E L    ++     +
Sbjct: 1   MKLASWNVNGLRAALKKGFWDVVRGLDADVLGLQEVRAEEPPELPEGLGGYRWYWNPGDR 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y GVA+L +  P+++   +  D+ D + R I   +    +   +   +   G  +   
Sbjct: 61  KGYAGVAVLVRVPPLDVTYGIGHDEFDEEGRVITLEYE---RYYVVNAYFPNAGRGLPRL 117

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
            Y        + +    + L   + ++  GD N+  +  D   P   +  A FT E R  
Sbjct: 118 GY---KLAFDQAIENYLEGLRARKGVVLMGDLNVAHREIDIARPKQNQKSAGFTPEERAW 174

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
                  G+ D  R  H      Y++W Y  ++ +KN G RID+I++S +    L  A I
Sbjct: 175 IDAFLKKGWIDTFRHLHPDATGAYTWWTYRFNARAKNIGWRIDYILISEDLLPHLMDAYI 234

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
                     SDH PV+  LD+
Sbjct: 235 YYDAY----ASDHVPVVAVLDV 252


>gi|254514282|ref|ZP_05126343.1| exodeoxyribonuclease III [gamma proteobacterium NOR5-3]
 gi|219676525|gb|EED32890.1| exodeoxyribonuclease III [gamma proteobacterium NOR5-3]
          Length = 267

 Score =  175 bits (443), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 68/263 (25%), Positives = 119/263 (45%), Gaps = 13/263 (4%)

Query: 5   TVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG-- 61
            V ++N N IRA        W+   +PDI+C+QETK +      E      YH       
Sbjct: 10  RVVSFNANGIRAAQRKGFFEWMARESPDIVCIQETKAQVHQLTDEAFHPQGYHCVYNDAE 69

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G A+ S+ +P  + T L  + +D + R+++  F      L + +LY+P G+   +
Sbjct: 70  RKGYSGTAVYSRVKPRSVTTRLGWEPVDGEGRYLQCDFAG----LSVISLYVPSGSSSDA 125

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
              + K ++++ FL             I   D+N   Q  D  N    + ++ F  E R 
Sbjct: 126 A-LEKKFTFMELFLEHLRVLKRKRREFIICADWNTCHQNIDLRNWRANQKNSGFLPEERA 184

Query: 182 SFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
              ++ +  GF D+ R        Y++W     +W+ N G R+D+ M++P+    +  A 
Sbjct: 185 WLDQIYDEIGFVDSFRVADTEPDRYTWWSNRGQAWANNVGWRLDYQMITPKLVPAVSGAS 244

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263
           I T+ R     SDH P I+  ++
Sbjct: 245 IYTEER----FSDHAPQIMEFEL 263


>gi|291276452|ref|YP_003516224.1| putative exodeoxyribonuclease [Helicobacter mustelae 12198]
 gi|290963646|emb|CBG39478.1| putative exodeoxyribonuclease [Helicobacter mustelae 12198]
          Length = 250

 Score =  175 bits (443), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 68/260 (26%), Positives = 114/260 (43%), Gaps = 13/260 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      + ++ + DI C+QE+K       F      + +  +  +
Sbjct: 1   MRLISWNVNGLRACMNKGFMDFFRQIDADIFCIQESKMHPDQADF-VFDGYHGYWNSAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+GV +LSK +P+ +   +  +  D + R I A +        + N+Y P+       
Sbjct: 60  KGYSGVVVLSKQEPLCVEYDMGIEHHDKEGRVICAEYP----DFYLINVYTPNSKRELER 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
              +     +       + LE ++PLI  GD N+  +  D  NP     +A FT E R+ 
Sbjct: 116 L--EYRMQWEDDFLNFLKNLERKKPLIICGDLNVAHKEIDLKNPKTNRRNAGFTDEEREK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
              L   GF D  R  +      YS+W Y   +   N G RID+ + S      L  A+I
Sbjct: 174 MTTLLENGFIDTFRYFYPDLEGAYSWWSYMGRARQNNTGWRIDYFLCSEILQKRLIEAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
            ++  G    SDH PV + +
Sbjct: 234 YSEILG----SDHCPVGLVI 249


>gi|257783920|ref|YP_003179137.1| exodeoxyribonuclease III Xth [Atopobium parvulum DSM 20469]
 gi|257472427|gb|ACV50546.1| exodeoxyribonuclease III Xth [Atopobium parvulum DSM 20469]
          Length = 259

 Score =  175 bits (443), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 68/263 (25%), Positives = 115/263 (43%), Gaps = 15/263 (5%)

Query: 5   TVATWNVNSIRARIHN---LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
            + +WNVN +RA +          +  N D+  LQETK ++     + L           
Sbjct: 8   KLISWNVNGLRAVLKKEPSFTEIFETINADVFALQETKLQEGQVELD-LPGYVQTWNYAD 66

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G A+ S+  P++++  +     D + R     F       +   + +   N    
Sbjct: 67  RKGYSGTAVFSRETPLQVIRQIGCPVADDEGRVCALEFE------KFWFVCVYTPNSKDQ 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
               D+     +  R     L  ++P+I  GD+N+     D  NP     +A F+ E R+
Sbjct: 121 LARLDERLEWDQHYRDFLAELSKQKPVITCGDFNVAHNEIDLKNPSSNRQNAGFSDEERE 180

Query: 182 SFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           SF KL + GFTD  R  H      YS+W Y  ++   N G RID+ ++S      + SA 
Sbjct: 181 SFTKLLDAGFTDTFRYRHPDITGAYSWWSYRFNARKNNAGWRIDYFLVSDRIAEQVKSAS 240

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263
           I ++  G    SDH P+ +S+++
Sbjct: 241 ILSEIYG----SDHCPIELSIEL 259


>gi|119899953|ref|YP_935166.1| exodeoxyribonuclease III [Azoarcus sp. BH72]
 gi|119672366|emb|CAL96280.1| Exodeoxyribonuclease III [Azoarcus sp. BH72]
          Length = 260

 Score =  175 bits (443), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 67/266 (25%), Positives = 121/266 (45%), Gaps = 15/266 (5%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59
           ++ + + N+N IR+        W+   N D++C+QE K +  +          Y      
Sbjct: 1   MLRIISANLNGIRSATTKGFLDWLPAQNADVVCVQELKAQAGDLTDAMRAPAGYQGWFHY 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GV I S+  P  +V  L   D+D + R+++A F      L + +LYLP G+  
Sbjct: 61  AEKKGYSGVGIYSRKAPDRVVEGLGIADIDAEGRYLQADFGA----LSVISLYLPSGSSS 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +   K S+++RF+   ++     + ++  GD+NI  +  D  N    + ++ F  E 
Sbjct: 117 EERQQA-KFSFMERFMPRLAELRRCGQEVVICGDWNIAHREIDLKNWKSNQKNSGFLPEE 175

Query: 180 RQSFQKLQN-MGFTDAIRATHDT--HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
           R     L +  G+ D  RA +       Y++W     +W+KN G RID+ + +P   +  
Sbjct: 176 RAWIGTLFDTHGWVDVYRALYPEATGDSYTWWSNRGQAWAKNVGWRIDYQIATPGIAARA 235

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLD 262
            +  +    R     SDH P++V  D
Sbjct: 236 RAGSVYKAQR----FSDHAPLVVDYD 257


>gi|83309117|ref|YP_419381.1| exonuclease III [Magnetospirillum magneticum AMB-1]
 gi|82943958|dbj|BAE48822.1| Exonuclease III [Magnetospirillum magneticum AMB-1]
          Length = 263

 Score =  175 bits (443), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 75/264 (28%), Positives = 115/264 (43%), Gaps = 5/264 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62
           + + TWN+NSIR RI  L       NPDIICLQE K +D  FP +  + + + H+   G 
Sbjct: 1   MRLVTWNINSIRLRIDLLRQVASVMNPDIICLQEIKVDDPLFPLDACREMGFGHVAFHGM 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K YNGVAILS+    E          D +         +    L I        +P T+ 
Sbjct: 61  KGYNGVAILSRLPIAEARPLSRCGRDDRRHLMARLENGVEVHCLYIPAG-GDIPDPETND 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           K+  K+ +++    +A+     +   I AGD+NI P   D ++          T    + 
Sbjct: 120 KFAHKLDFVREITAWAAAEFTPDSRAILAGDFNIAPLEADVWSHKQLLKVVSHTPVEVEL 179

Query: 183 FQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSWSKN-KGIRIDHIMLSPEATSLLHSA 239
               Q                  L+++W Y +  W KN +G R+DH+ ++P     L   
Sbjct: 180 LNAFQASVPFVDAMRHFVPPEEKLFTWWSYRSPDWQKNDRGRRLDHVWVTPALVPSLRGM 239

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
            +  + R W +PSDH PV+V  D+
Sbjct: 240 LVAREARSWEQPSDHVPVMVDFDL 263


>gi|308179822|ref|YP_003923950.1| exodeoxyribonuclease III [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|308045313|gb|ADN97856.1| exodeoxyribonuclease III [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 254

 Score =  175 bits (443), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 68/263 (25%), Positives = 111/263 (42%), Gaps = 13/263 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +         E + D  C+QETK +      +       +     +
Sbjct: 1   MKLISWNVNGLRAAVKHGFVTTFNELDADFFCVQETKLQAGQIELD-FPGYYQYWNYAER 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K++P+ +   +   + D + R I   +        +       G  +   
Sbjct: 60  KGYSGTAIFTKHEPLNVTYGIGVPEFDDEGRVITLEYA---DYYVLTCYTPNSGGELKRL 116

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
            Y  +    +         L   +PLIF GD N+  +  D  N     + A FT E R  
Sbjct: 117 DYRQQW---EDAFLTYINSLSANKPLIFCGDLNVAHENIDLKNWHSNHHSAGFTDEERTK 173

Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L   G+TD  R  +     +YS+W Y   +   N G RID+ + S +  S L +ARI
Sbjct: 174 FDRLLAAGYTDTFRHFYPDQTDIYSWWSYRGHARDNNSGWRIDYFITSQQLDSQLLNARI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLDIP 264
             +  G    SDH PV + + +P
Sbjct: 234 HNEIFG----SDHCPVELDIILP 252


>gi|126724355|ref|ZP_01740198.1| exodeoxyribonuclease III, putative [Rhodobacterales bacterium
           HTCC2150]
 gi|126705519|gb|EBA04609.1| exodeoxyribonuclease III, putative [Rhodobacterales bacterium
           HTCC2150]
          Length = 262

 Score =  175 bits (443), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 79/262 (30%), Positives = 118/262 (45%), Gaps = 6/262 (2%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQK 63
           T+ATWN+NS+R R   +  ++ E+ PD++CLQE K+     P E+   L Y H+   GQK
Sbjct: 4   TLATWNINSVRLREPLVCKFLAEHGPDVLCLQECKSPVDKIPTESFAELGYTHMIANGQK 63

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            YNGVAILSK   +E       D    +    +    +      +        N   + K
Sbjct: 64  GYNGVAILSKLPIVETHRFDFADLGHARHIAGKMENGVTIHNFYVPAG-GDEPNVEKNEK 122

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVRQS 182
           +  K+ ++K    +       +   I  GD NI P   D ++          T  EV + 
Sbjct: 123 FAQKLQYLKDMRDWGQSEKPTK--SILVGDLNIAPLEDDVWDHKKLLKVVSHTPLEVEKL 180

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLLHSARI 241
            +      + D  RA      LYS+W Y A  W   +KG R+DH+  + +     HS+R+
Sbjct: 181 AEVQAAADWVDVTRADIPEGKLYSWWSYRARDWDTADKGRRLDHVWATSDIAKSGHSSRV 240

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
               RGW KPSDH P+I   D+
Sbjct: 241 IRDARGWEKPSDHAPIITEFDL 262


>gi|254804108|ref|YP_003082329.1| putative DNA repair endonuclease [Neisseria meningitidis alpha14]
 gi|254667650|emb|CBA03464.1| putative DNA repair endonuclease [Neisseria meningitidis alpha14]
          Length = 259

 Score =  175 bits (443), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 64/264 (24%), Positives = 120/264 (45%), Gaps = 13/264 (4%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++ + + NVN IR+        +I  +  DI+C+QE K ++ +   +       H     
Sbjct: 1   MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADLSADMKNPHGMHGYWHC 60

Query: 62  --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             ++ Y+GVA+ SK +P  +   +  ++ D + RF+   F      L + +LYLP G+  
Sbjct: 61  AEKRGYSGVAVYSKRKPDNVQIGMGIEEFDREGRFVRCDFD----RLSVISLYLPSGSSA 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +   K  ++  F             ++  GD+NI  Q  D  N    + ++ F  E 
Sbjct: 117 EERQQV-KYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEE 175

Query: 180 RQSF-QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R+   + +  +G+TD  R  +     Y++W     +++K+ G RID+ M++PE  +   S
Sbjct: 176 REWIGKVIHKLGWTDMWRTLYPDVPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVS 235

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
           A +        K SDH P+++  D
Sbjct: 236 AHVYKD----EKFSDHAPLVMEYD 255


>gi|225077483|ref|ZP_03720682.1| hypothetical protein NEIFLAOT_02546 [Neisseria flavescens
           NRL30031/H210]
 gi|224951194|gb|EEG32403.1| hypothetical protein NEIFLAOT_02546 [Neisseria flavescens
           NRL30031/H210]
          Length = 259

 Score =  175 bits (443), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 65/264 (24%), Positives = 120/264 (45%), Gaps = 13/264 (4%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++ + + NVN IR+        +I  +  DI+C+QE K ++ +   +       H     
Sbjct: 1   MLKIISANVNGIRSAYKKGFYEYIAASGVDIVCVQELKAQEADLSDDMKNPHGMHGYWHC 60

Query: 62  --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             ++ Y+GVA+ SK +P  +   +  ++ D + RF+   F      L + +LYLP G+  
Sbjct: 61  AEKRGYSGVAVYSKRKPDNVQIGMGIEEFDREGRFVRCDFG----KLSVISLYLPSGSSA 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +   K  ++  F             ++  GD+NI  Q  D  N    + ++ F  E 
Sbjct: 117 EERQQV-KYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEE 175

Query: 180 RQSF-QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R+   + +  +G+TD  R  +     Y++W     +++K+ G RID+ M++PE  +   S
Sbjct: 176 REWIGKVIHKLGWTDMWRTLYPDVPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVS 235

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
           A +        K SDH P++V  D
Sbjct: 236 AHVYKD----EKFSDHAPLVVEYD 255


>gi|153951075|ref|YP_001397480.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. doylei
           269.97]
 gi|152938521|gb|ABS43262.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. doylei
           269.97]
          Length = 259

 Score =  175 bits (443), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 62/264 (23%), Positives = 100/264 (37%), Gaps = 12/264 (4%)

Query: 2   SVVTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
            ++ + +WNVN +R+    N   WIK+   D I  QE K  +  FP +  +    H+   
Sbjct: 6   KIMKLLSWNVNGLRSICDKNALDWIKKEKIDFIGFQEIKAHEDKFPKKIYEYPFKHMYFN 65

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
             K      ++S       V      D +           I    +   N          
Sbjct: 66  SAKRAGYSGVMSLCNFDSEVKKCEFFDDEEGRVLEHRFKNIALFNIYFPN------GQKD 119

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             + + K+ +   FL + ++ L+    +I  GD N   +  D  +P    N + F    R
Sbjct: 120 EERLNFKMKFYTDFLVYLNKLLKDGFEIIICGDVNTAHKEIDLTHPKANANTSGFLPIER 179

Query: 181 QSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
                L  +GF D  R  + +    YS+W Y   +  +N G RID+  +S      L +A
Sbjct: 180 AWIDDLLKLGFVDTFREINGEIKEKYSWWSYRMKARERNVGWRIDYFFISKGLKDKLKNA 239

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
            I     G    SDH PV + +DI
Sbjct: 240 FIRDDIFG----SDHAPVGIEIDI 259


>gi|86149633|ref|ZP_01067863.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|88597280|ref|ZP_01100515.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni 84-25]
 gi|218561918|ref|YP_002343697.1| exodeoxyribonuclease [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|85839901|gb|EAQ57160.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|88190341|gb|EAQ94315.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni 84-25]
 gi|112359624|emb|CAL34409.1| exodeoxyribonuclease [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|284925531|gb|ADC27883.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni
           IA3902]
 gi|315927175|gb|EFV06525.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni
           DFVF1099]
 gi|315928582|gb|EFV07877.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni 305]
          Length = 252

 Score =  175 bits (443), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 62/262 (23%), Positives = 97/262 (37%), Gaps = 12/262 (4%)

Query: 4   VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA    N   WI +   D I  QE K  +  FP +  +    H+     
Sbjct: 1   MKLLSWNVNGLRAICDKNALDWIAQEQIDFIGFQEIKAHEDKFPKKIYEYPFKHMYFNSA 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K      ++S       V      D +           I    +   N            
Sbjct: 61  KRAGYSGVMSLCNFNSEVKKCEFFDDEEGRVLEHRFKNIALFNIYFPN------GQKDEE 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           + + K+ +   FL +  + L+    +I  GD N   +  D  +P    N + F    R  
Sbjct: 115 RLNFKMQFYADFLVYLDKLLKDGFEIIICGDVNTAHKEIDLTHPKANANTSGFLPIERAW 174

Query: 183 FQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
              L  +GF D  R  + +    YS+W Y   +  +N G RID+  +S      L +A I
Sbjct: 175 IDDLLKLGFIDTFREINGEIKEKYSWWSYRMKARERNVGWRIDYFFISKGLKDKLKNAFI 234

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
                G    SDH PV + +DI
Sbjct: 235 RDDIFG----SDHAPVGIEIDI 252


>gi|330818664|ref|YP_004362369.1| Endonuclease/exonuclease/phosphatase family protein [Burkholderia
           gladioli BSR3]
 gi|327371057|gb|AEA62413.1| Endonuclease/exonuclease/phosphatase family protein [Burkholderia
           gladioli BSR3]
          Length = 257

 Score =  175 bits (443), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 60/264 (22%), Positives = 113/264 (42%), Gaps = 13/264 (4%)

Query: 3   VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59
           ++ V T N+N IR A       W+ +   D +C+QE K    + P E      +  H   
Sbjct: 1   MLRVITANLNGIRSAAKKGFFDWLGDQKADCVCVQEIKVSADDLPPEFAAPHGFTGHFHH 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G  + ++ +P +++      + D + R++EA +      L + ++Y+P G+  
Sbjct: 61  AEKKGYSGAGLYTRREPDDLIIGYGSSEFDSEGRYVEARYG----KLSVISVYVPSGS-S 115

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +   K  ++  F+   ++    +  +I  GD NI+ +  D  N    + ++    E 
Sbjct: 116 GEERQQAKFRFMAEFMPHLAELKAKKREVILCGDVNIVHKEIDIRNWKSNQKNSGCLPEE 175

Query: 180 RQSFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R    +L +  G+ D  R        Y++W     +++KN G RID+ + +P        
Sbjct: 176 RAWLTQLFDEVGYVDVFRTLDPRPDQYTWWSNRGQAYAKNVGWRIDYQIATPGVAGTAKQ 235

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
             I        K SDH P+ V  D
Sbjct: 236 TSIFRDI----KFSDHAPLTVDYD 255


>gi|328702292|ref|XP_001952290.2| PREDICTED: recombination repair protein 1-like [Acyrthosiphon
           pisum]
          Length = 317

 Score =  175 bits (443), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 70/263 (26%), Positives = 114/263 (43%), Gaps = 12/263 (4%)

Query: 4   VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFET-LQSLNYHIETCG 61
           + + +WNV  +RA +   +  ++K+ +PDIICLQE K  +K  P E  L     +I +  
Sbjct: 64  LKIISWNVAGLRAWLKKDVVEYLKKEDPDIICLQEIKCTEKQMPDEAKLPGYKIYINSGD 123

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +  Y+GVA+ SK +PI +       DLD     +          +         G     
Sbjct: 124 KAGYSGVALYSKTKPISVRMGKEIKDLDDNEGRVIEAEYEQFFLVSTYIPNAGAGLKTLP 183

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
                K        R   + L+ ++P++  GD N+  +  D  NP      A FT E R 
Sbjct: 184 -----KRMKWDEAFRKYLKELDTKKPVVLTGDLNVAHEEIDIANPKTNTKSAGFTKEERD 238

Query: 182 SFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           +   L   GF D  R  +      Y+FW Y+ +S +KN G R+D+ + S      +  + 
Sbjct: 239 NMSLLLEQGFVDTFRTLNPEKTGAYTFWTYFHNSRAKNVGWRLDYFITSKRFMDNVCDST 298

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263
           I  +  G    SDH P++  ++I
Sbjct: 299 IRNEVLG----SDHCPIVFYINI 317


>gi|254480722|ref|ZP_05093969.1| exodeoxyribonuclease III [marine gamma proteobacterium HTCC2148]
 gi|214039305|gb|EEB79965.1| exodeoxyribonuclease III [marine gamma proteobacterium HTCC2148]
          Length = 260

 Score =  174 bits (442), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 71/263 (26%), Positives = 118/263 (44%), Gaps = 13/263 (4%)

Query: 5   TVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG-- 61
            V T N N IRA        W+ + N D+IC+QETK +         Q   YH       
Sbjct: 3   RVITLNTNGIRAAARKGFFDWLPKQNADVICIQETKAQLDQLGDPVFQPEGYHRYFNDAV 62

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G AI SK +P +++T L  D  D + R+++A +      + + +LY+P G+    
Sbjct: 63  KKGYSGTAIYSKVKPRKVITSLGWDPADSEGRYVQADYDG----ISVISLYMPSGSSSEE 118

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
                K  ++  F+             I   D+NI  +  D  N      ++ F  E R 
Sbjct: 119 VLQK-KYRFMDLFMEHLKGLRRKRREFIICADWNICHKEIDLRNWRSNRKNSGFLPEERA 177

Query: 182 SFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
              +L +  G+ D+ R  ++    Y++W     +W+KN G R+D+ +++P     + +A 
Sbjct: 178 WLDQLYDEVGYIDSFRLVNEEPDQYTWWSNRGQAWAKNVGWRLDYQVITPRLADKVLAAD 237

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263
           I T  R     SDH P I+  D+
Sbjct: 238 IYTDER----FSDHAPQIMDYDL 256


>gi|169823955|ref|YP_001691566.1| exodeoxyribonuclease III [Finegoldia magna ATCC 29328]
 gi|167830760|dbj|BAG07676.1| exodeoxyribonuclease III [Finegoldia magna ATCC 29328]
          Length = 253

 Score =  174 bits (442), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 64/262 (24%), Positives = 105/262 (40%), Gaps = 13/262 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFET-LQSLNYHIETCG 61
           + + +WNVN  RA +           N DI CLQE K ++     E  ++  + +  +  
Sbjct: 1   MKLISWNVNGYRAVMKKGFMDAFNSLNADIFCLQEIKMKENQMTDEMNIEGYHRYSYSAN 60

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +  Y+G  + +K +PI +   +  D+ D + R I   +        +          +  
Sbjct: 61  KAGYSGTLVYTKVEPIGVSYGIGIDEHDTEGRVITCEYE---DFFLVNVYTPNSKQKLER 117

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
             Y       +         L   +P+I  GD N+     D  NP      A FT E R 
Sbjct: 118 LDYR---MVWEDEFHNYLNILRDRKPVIVCGDLNVAHNEIDLKNPQSNRRSAGFTDEERN 174

Query: 182 SFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
               L N G+ D  R  +      YS+W Y+A +  +N G RID+ ++S +    L  A+
Sbjct: 175 KMSLLLNDGYIDTFRYFYPDKTDEYSYWSYFAKARERNAGWRIDYFLVSDDLKDNLVDAK 234

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I     G    SDH PV + ++
Sbjct: 235 IHQSIMG----SDHCPVELEIN 252


>gi|187927152|ref|YP_001897639.1| exodeoxyribonuclease III Xth [Ralstonia pickettii 12J]
 gi|241661660|ref|YP_002980020.1| exodeoxyribonuclease III Xth [Ralstonia pickettii 12D]
 gi|309780146|ref|ZP_07674897.1| exodeoxyribonuclease III [Ralstonia sp. 5_7_47FAA]
 gi|187724042|gb|ACD25207.1| exodeoxyribonuclease III Xth [Ralstonia pickettii 12J]
 gi|240863687|gb|ACS61348.1| exodeoxyribonuclease III Xth [Ralstonia pickettii 12D]
 gi|308920849|gb|EFP66495.1| exodeoxyribonuclease III [Ralstonia sp. 5_7_47FAA]
          Length = 261

 Score =  174 bits (442), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 59/264 (22%), Positives = 112/264 (42%), Gaps = 12/264 (4%)

Query: 3   VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IET 59
           ++ + + N+N +R A       W+ + + D +C+QE K    +   E L    YH   + 
Sbjct: 1   MLRIISANLNGVRSAASKGFFDWMGKQDADFVCVQELKCAQDDMTPEFLAPHGYHGVFQH 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G  + ++++P E++      + D + R++EA +      L + ++Y+P G+  
Sbjct: 61  AVKKGYSGAGLYTRHKPDEVIVGFDNGEFDAEGRYVEARYG----KLSVISVYVPSGSSG 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +                 R E    ++  GD NI+ +  D  N    + ++    E 
Sbjct: 117 EERQQAKFRFMDLFMEHLKDLRHEKGREVVLCGDVNIVHKEIDIKNWKGNQKNSGCLPEE 176

Query: 180 RQSFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R    KL +  G+ D  R        Y++W     +++KN G RID+ + +P   +    
Sbjct: 177 RAWLTKLFDEVGYVDVFRTLDQRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGIAATARR 236

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
           A I        K SDH P+ +  D
Sbjct: 237 ASIFKDI----KFSDHAPLTIDYD 256


>gi|260072724|gb|ACX30620.1| exonuclease III [uncultured bacterium ARCTIC96BD-19]
          Length = 254

 Score =  174 bits (442), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 55/263 (20%), Positives = 103/263 (39%), Gaps = 12/263 (4%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ-SLNYHIETCG 61
           + + T NVN IRA        W+K+ N D++CLQE K ++           +  +  +  
Sbjct: 1   MRIITINVNGIRAAERKGFFNWLKKQNADVVCLQEIKAQEDQLDERFYPLEMFTYYHSAE 60

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G  +  K +P +I      D              ++  ++ + +           
Sbjct: 61  RKGYSGTGLYCKSKPDKISYSPWEDMNSEGRIIQADFGDLSVLSIYLPSGSSKEERQALK 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            ++        RFL    +  +     +  GD+NI  +  D  N    + ++ F  E R 
Sbjct: 121 MEFIYD-----RFLPHLRELQKDNRRYVICGDWNIAHKKIDLKNWRSNQKNSGFLPEERA 175

Query: 182 SFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
               L +  G+ D+ R  ++    Y++W     +W  N G R+D+ ++S        S  
Sbjct: 176 WLDILYDEVGYIDSFREINNEEFQYTWWSNRGQAWLNNTGWRLDYHVVSSNMAGTATSCE 235

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263
           I    R     SDH+P+I+   +
Sbjct: 236 IYKAER----FSDHSPLIIDYQL 254


>gi|162329924|pdb|2O3H|A Chain A, Crystal Structure Of The Human C65a Ape
          Length = 285

 Score =  174 bits (442), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 74/269 (27%), Positives = 126/269 (46%), Gaps = 17/269 (6%)

Query: 2   SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN----YH 56
           + + +A+WNV+ +RA I      W+KE  PDI+CLQETK  +   P E  +       Y 
Sbjct: 27  ATLKIASWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQYW 86

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                ++ Y+GV +LS+  P+++   +  ++ D + R I A F      + +       G
Sbjct: 87  SAPSDKEGYSGVGLLSRQCPLKVSYGIGDEEHDQEGRVIVAEF---DSFVLVTAYVPNAG 143

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
             +   +Y  +     R      + L   +PL+  GD N+  +  D  NP   + +A FT
Sbjct: 144 RGLVRLEYRQRWDEAFRKF---LKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 200

Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E +   + LQ +   D+ R  +    + Y+FW Y  ++ SKN G R+D+ +LS     
Sbjct: 201 PQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLP 260

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            L  ++I +K  G    SDH P+ + L +
Sbjct: 261 ALCDSKIRSKALG----SDHCPITLYLAL 285


>gi|28377662|ref|NP_784554.1| exodeoxyribonuclease III [Lactobacillus plantarum WCFS1]
 gi|254555843|ref|YP_003062260.1| exodeoxyribonuclease III [Lactobacillus plantarum JDM1]
 gi|28270495|emb|CAD63397.1| exodeoxyribonuclease III [Lactobacillus plantarum WCFS1]
 gi|254044770|gb|ACT61563.1| exodeoxyribonuclease III [Lactobacillus plantarum JDM1]
          Length = 254

 Score =  174 bits (442), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 68/263 (25%), Positives = 111/263 (42%), Gaps = 13/263 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +         E + D  C+QETK +      +       +     +
Sbjct: 1   MKLISWNVNGLRAAVKHGFVTTFNELDADFFCVQETKLQAGQIELD-FPGYYQYWNYAER 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K++P+ +   +   + D + R I   +        +       G  +   
Sbjct: 60  KGYSGTAIFTKHEPLNVTYGIGVPEFDDEGRVITLEYA---DYYVLTCYTPNSGGELKRL 116

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
            Y  +    +         L   +PLIF GD N+  +  D  N     + A FT E R  
Sbjct: 117 DYRQQW---EDAFLTYINSLSANKPLIFCGDLNVAHENIDLKNWRSNHHSAGFTDEERTK 173

Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L   G+TD  R  +     +YS+W Y   +   N G RID+ + S +  S L +ARI
Sbjct: 174 FDRLLAAGYTDTFRHFYPDQTDIYSWWSYRGHARDNNSGWRIDYFITSQQLDSQLLNARI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLDIP 264
             +  G    SDH PV + + +P
Sbjct: 234 HNEIFG----SDHCPVELDIILP 252


>gi|300705466|ref|YP_003747069.1| exodeoxyribonuclease III/endonuclease/phosphatase [Ralstonia
           solanacearum CFBP2957]
 gi|299073130|emb|CBJ44488.1| putative exodeoxyribonuclease III/endonuclease/phosphatase
           [Ralstonia solanacearum CFBP2957]
          Length = 261

 Score =  174 bits (442), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 59/264 (22%), Positives = 112/264 (42%), Gaps = 12/264 (4%)

Query: 3   VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IET 59
           ++ + + N+N +R A       W+ + + D +C+QE K    +   E L    YH   + 
Sbjct: 1   MLRIISANLNGVRSAASKGFFDWMGKQDADFVCVQELKCAQDDMTPELLAPHGYHGVFQH 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G  + +++QP +++    G + D + R++EA +      L + ++Y+P G+  
Sbjct: 61  AVKKGYSGAGLYTRHQPDDVIVGFDGGEFDAEGRYVEARYG----KLSVISVYVPSGSSG 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +                 R E    ++  GD NI+ +  D  N    + ++    E 
Sbjct: 117 EERQQAKYRFMDLFMQHLVDLRHEKGREVVLCGDVNIVHKEIDIKNWKGNQKNSGCLPEE 176

Query: 180 RQSFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R    +L +  G+ D  R        Y++W     +++KN G RID+ + +P   +    
Sbjct: 177 RAWLTRLFDEVGYVDVFRTLDTRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGIAATARR 236

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
             I        K SDH P+ V  D
Sbjct: 237 TSIFRDI----KFSDHAPLTVDYD 256


>gi|301066021|ref|YP_003788044.1| exonuclease III [Lactobacillus casei str. Zhang]
 gi|300438428|gb|ADK18194.1| Exonuclease III [Lactobacillus casei str. Zhang]
          Length = 252

 Score =  174 bits (442), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 64/257 (24%), Positives = 108/257 (42%), Gaps = 12/257 (4%)

Query: 4   VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +         E + D  CLQETK +      + L   + +     +
Sbjct: 1   MKLISWNVNGLRAVLKKEFMTIFNELDADWFCLQETKMQAGQVELD-LPGYHQYFNYAER 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K++P+ +   +   + D + R I   +                   +   
Sbjct: 60  KGYSGTAIFTKHEPLNVTYGMGVPEHDTEGRIITLEYPNFYLMTVYTPNSGGELKRLDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +         +     + +L  ++PL++ GD N+  Q  D  N     ++A FT E R  
Sbjct: 120 QQ------WDKDFLAYTNQLAAKKPLVYCGDLNVAHQEIDLKNDKTNHHNAGFTDEERAD 173

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F K  + GF D  R  +     YS+W Y   + + N G RID+ + S +    +  A+I 
Sbjct: 174 FTKQLDSGFIDTFRNLYPDTVTYSWWSYRFHARANNAGWRIDYFVSSRDFKPYIQDAKIL 233

Query: 243 TKPRGWTKPSDHTPVIV 259
           T   G    SDH PV +
Sbjct: 234 TDIMG----SDHCPVEL 246


>gi|227876386|ref|ZP_03994498.1| possible exodeoxyribonuclease III [Mobiluncus mulieris ATCC 35243]
 gi|269975950|ref|ZP_06182954.1| exodeoxyribonuclease III Xth [Mobiluncus mulieris 28-1]
 gi|306817278|ref|ZP_07451024.1| exodeoxyribonuclease III [Mobiluncus mulieris ATCC 35239]
 gi|227842927|gb|EEJ53124.1| possible exodeoxyribonuclease III [Mobiluncus mulieris ATCC 35243]
 gi|269935778|gb|EEZ92308.1| exodeoxyribonuclease III Xth [Mobiluncus mulieris 28-1]
 gi|304649958|gb|EFM47237.1| exodeoxyribonuclease III [Mobiluncus mulieris ATCC 35239]
          Length = 288

 Score =  174 bits (442), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 64/288 (22%), Positives = 114/288 (39%), Gaps = 30/288 (10%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + ++TWN+NSIR+R+  +  ++  +N D++ +QE K     FP E   +  Y +   G  
Sbjct: 1   MRISTWNINSIRSRLPRVLDFLCRSNVDVLAMQEIKCRVSQFPVEAFLASGYQVFVNGLN 60

Query: 64  SYNGVAILSKYQPIEIVTH------LPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
            +NGVAI  +      V        +P                +    +   +LY+P+G 
Sbjct: 61  QWNGVAIAVRADLDAQVLGTEFSGKIPQPPFGKPPVVEPRALGVRVAGIECWSLYVPNGR 120

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEP--LIFAGDYNIIPQPHDCYNPIIWENDACF 175
            I +  +  K++W++     A   L        +F GD+NI P   D ++   +      
Sbjct: 121 EIDNPHFAYKLAWLEALRSHAHTLLAANPTALGLFMGDFNIAPCDEDVWDIQEFVGATHV 180

Query: 176 T----------------------LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD 213
           +                       E   S     +      +  T      +++WDY   
Sbjct: 181 SVPEREAFARLLQSDTLAQAVSLDETAISRIGTDSTNCGGLVEVTRQFAPGWTYWDYQKA 240

Query: 214 SWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
            W +N+G++ID  + +P     +  A I  + R   KPSDH PV++ L
Sbjct: 241 RWRRNQGMKIDFALATPNLADKITGAFIGREERDGEKPSDHVPVVLEL 288


>gi|325127357|gb|EGC50292.1| exodeoxyribonuclease III [Neisseria meningitidis N1568]
          Length = 259

 Score =  174 bits (442), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 65/264 (24%), Positives = 120/264 (45%), Gaps = 13/264 (4%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++ + + NVN IR+        +I  +  DI+C+QE K ++ +   +       H     
Sbjct: 1   MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADLSADMKNPHGMHGHWHC 60

Query: 62  --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             ++ Y+GVA+ SK +P  +   +  ++ D + RF+   F      L + +LYLP G+  
Sbjct: 61  AEKRGYSGVAVYSKRKPDNVQIGMGIEEFDREGRFVRCDFG----RLSVISLYLPSGSSA 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +   K  ++  F             ++  GD+NI  Q  D  N    + ++ F  E 
Sbjct: 117 EERQQV-KYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEE 175

Query: 180 RQSF-QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R+   + +  +G+TD  R  +  +  Y++W     +++K+ G RID+ M++PE      S
Sbjct: 176 REWIGKVIHTLGWTDMWRTLYPDNPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAVKALS 235

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
           A +        K SDH P++V  D
Sbjct: 236 AHVYKD----EKFSDHAPLVVEYD 255


>gi|315057682|gb|ADT72011.1| Exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni S3]
          Length = 252

 Score =  174 bits (442), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 62/262 (23%), Positives = 97/262 (37%), Gaps = 12/262 (4%)

Query: 4   VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA    N   WI +   D I  QE K  +  FP +  +    H+     
Sbjct: 1   MKLLSWNVNGLRAICDKNALDWIAQEQIDFIGFQEIKAHEDKFPKKIYEYPFKHMYFNSA 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K      ++S       V      D +           I    +   N            
Sbjct: 61  KRAGYSGVMSLCNFNSEVKKCEFFDDEEGRVLEHRFKNIALFNIYFPN------GQKDEE 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           + + K+ +   FL +  + L+    +I  GD N   +  D  +P    N + F    R  
Sbjct: 115 RLNFKMKFYADFLVYLDKLLKDGFEIIICGDVNTAHKEIDLTHPKANANTSGFLPIERAW 174

Query: 183 FQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
              L  +GF D  R  + +    YS+W Y   +  +N G RID+  +S      L +A I
Sbjct: 175 IDDLLKLGFIDTFREINGEIKEKYSWWSYRMKARERNVGWRIDYFFISKGLKDKLKNAFI 234

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
                G    SDH PV + +DI
Sbjct: 235 RDDIFG----SDHAPVGIEIDI 252


>gi|157414552|ref|YP_001481808.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni 81116]
 gi|157385516|gb|ABV51831.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni 81116]
 gi|315932053|gb|EFV11006.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni 327]
          Length = 252

 Score =  174 bits (442), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 62/262 (23%), Positives = 97/262 (37%), Gaps = 12/262 (4%)

Query: 4   VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA    N   WI +   D I  QE K  +  FP +  +    H+     
Sbjct: 1   MKLLSWNVNGLRAICDKNALDWIAQEQIDFIGFQEIKAHEDKFPKKIYEYPFKHMYFNSA 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K      ++S       V      D +           I    +   N            
Sbjct: 61  KRAGYSGVMSLCNFDSEVKKCEFFDDEEGRVLEHRFKNIALFNIYFPN------GQKDEE 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           + + K+ +   FL +  + L+    +I  GD N   +  D  +P    N + F    R  
Sbjct: 115 RLNFKMKFYADFLVYLDKLLKDGFEIIICGDVNTAHKEIDLTHPKANANTSGFLPIERAW 174

Query: 183 FQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
              L  +GF D  R  + +    YS+W Y   +  +N G RID+  +S      L +A I
Sbjct: 175 IDDLLKLGFIDTFREINGEIKEKYSWWSYRMKARERNVGWRIDYFFISKGLKDKLKNAFI 234

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
                G    SDH PV + +DI
Sbjct: 235 RDDIFG----SDHAPVGIEIDI 252


>gi|283955677|ref|ZP_06373170.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni 1336]
 gi|283792902|gb|EFC31678.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni 1336]
          Length = 252

 Score =  174 bits (442), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 62/262 (23%), Positives = 97/262 (37%), Gaps = 12/262 (4%)

Query: 4   VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA    N   WI +   D I  QE K  +  FP +  +    H+     
Sbjct: 1   MKLLSWNVNGLRAICDKNALDWIAQEKIDFIGFQEIKAHEDKFPKKIYEYPFKHMYFNSA 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K      ++S       V      D +           I    +   N            
Sbjct: 61  KRAGYSGVMSLCNFDSEVKKCEFFDDEEGRVLEHRFKNIALFNIYFPN------GQKDEE 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           + + K+ +   FL +  + L+    +I  GD N   +  D  +P    N + F    R  
Sbjct: 115 RLNFKMKFYADFLAYLDKLLKDGFEIIICGDVNTAHKEIDLTHPKANVNTSGFLPIERAW 174

Query: 183 FQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
              L  +GF D  R  + +    YS+W Y   +  +N G RID+  +S      L +A I
Sbjct: 175 IDDLLKLGFIDTFREINGEIKEKYSWWSYRMKARERNVGWRIDYFFISKGLKDKLKNAFI 234

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
                G    SDH PV + +DI
Sbjct: 235 RDDIFG----SDHAPVGIEIDI 252


>gi|182413315|ref|YP_001818381.1| exodeoxyribonuclease III Xth [Opitutus terrae PB90-1]
 gi|177840529|gb|ACB74781.1| exodeoxyribonuclease III Xth [Opitutus terrae PB90-1]
          Length = 253

 Score =  174 bits (442), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 70/261 (26%), Positives = 115/261 (44%), Gaps = 10/261 (3%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPF-ETLQSLNYHIETCG 61
           + + +WNVN +RA +      ++ + + D+ICLQETK    +            H  +  
Sbjct: 1   MKLVSWNVNGVRAVLKKGFLDYMGKVDADVICLQETKAHPGDVQHVAWTAGYTPHWYSAV 60

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G A+ ++  P+++   +     D + R I A F        + N+Y P+     +
Sbjct: 61  KKGYSGTALFTRVAPLKVNFGIGLPGHDDEGRVITAEFA----DFFLVNVYQPNSQRGLT 116

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
                   W   FL F  +  +  +P++F GD N+  Q  D  NP     +A FT E R 
Sbjct: 117 RLKYRTEEWDPAFLAFLKKLEKKGKPVVFCGDLNVAHQEIDLTNPKTNRRNAGFTDEERA 176

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           +F KL   GF D  R        Y++W    +  ++N G R+D+ + S +    L  A I
Sbjct: 177 NFSKLLASGFVDTFREFEKGPGHYTWWSQMMNCRARNIGWRVDYFVASEKLKPALKRAWI 236

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
             +  G    SDH PV + L 
Sbjct: 237 SPEVMG----SDHCPVGLELK 253


>gi|328958150|ref|YP_004375536.1| apurinic/apyrimidinic endonuclease [Carnobacterium sp. 17-4]
 gi|328674474|gb|AEB30520.1| apurinic/apyrimidinic endonuclease [Carnobacterium sp. 17-4]
          Length = 253

 Score =  174 bits (442), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 66/261 (25%), Positives = 111/261 (42%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA          +E + D  CLQETK ++     +       +     +
Sbjct: 1   MKFISWNVNGLRAIVKKGFVEIFEELDADFFCLQETKLQEGQIELD-FPGYYDYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K++P+++   +   + D + R I  ++                 +     
Sbjct: 60  KGYSGTAIFTKHKPLDVSYGIGKPEHDQEGRVITLSYPN-----YYVVTCYTPNSKSELK 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           + D ++ W   F  +  + L+ E+P+I  GD N+  +  D  N    +  A F+ E R  
Sbjct: 115 RLDYRMQWEDDFQLYLKK-LDSEKPVILCGDLNVAHENIDLKNWKTNQLSAGFSKEERMK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F  L + GF D  R  +      Y++W+Y  ++   N G RID+  +S      L  ARI
Sbjct: 174 FSALLDAGFIDTFRYFYPDLEGAYTWWNYRFNARKTNAGWRIDYFCVSTRLQDHLQEARI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
                G    SDH PV + L 
Sbjct: 234 LDDIVG----SDHCPVELILK 250


>gi|190574562|ref|YP_001972407.1| putative exodeoxyribonuclease III protein [Stenotrophomonas
           maltophilia K279a]
 gi|190012484|emb|CAQ46112.1| putative EXODEOXYRIBONUCLEASE III PROTEIN [Stenotrophomonas
           maltophilia K279a]
          Length = 263

 Score =  174 bits (442), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 89/259 (34%), Positives = 134/259 (51%), Gaps = 3/259 (1%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
             + +AT+NVN I  R+  L  W+   +PD++ LQE K  D  FP   L+   Y     G
Sbjct: 5   KTLRIATFNVNGIGTRLPQLLDWLHRESPDVVALQELKATDAAFPAAALEQAGYGALWQG 64

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +  +NGVA+L++             +                  + +G LYLP+GNP   
Sbjct: 65  EARWNGVALLARGTMPVESRRRLPGEPKDTQS---RYLEAAVHGVIVGALYLPNGNPQPG 121

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            K+D K+ W++R +R A   +EL  P +  GD+N+IP   D Y+P  W  DA F  EVR 
Sbjct: 122 PKFDYKLRWMERLIRHARSLVELPHPALLLGDFNVIPTDADVYDPKAWRRDALFQPEVRD 181

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           +F++L   G+TDA+R  H    +Y+FWDY+     +++G+RIDH++L+P     L  A +
Sbjct: 182 AFERLLAQGWTDALRKVHGDATIYTFWDYFRQHAERDRGLRIDHLLLNPVLAERLKDAGV 241

Query: 242 DTKPRGWTKPSDHTPVIVS 260
           D   R   K SDH P  V+
Sbjct: 242 DRWVRLQEKASDHAPAWVT 260


>gi|121635738|ref|YP_975983.1| putative nuclease [Neisseria meningitidis FAM18]
 gi|120867444|emb|CAM11216.1| putative nuclease [Neisseria meningitidis FAM18]
 gi|254671914|emb|CBA04230.1| putative endonuclease [Neisseria meningitidis alpha275]
 gi|308390182|gb|ADO32502.1| exodeoxyribonuclease [Neisseria meningitidis alpha710]
 gi|325131323|gb|EGC54034.1| exodeoxyribonuclease III [Neisseria meningitidis M6190]
 gi|325133258|gb|EGC55924.1| exodeoxyribonuclease III [Neisseria meningitidis M13399]
 gi|325137352|gb|EGC59940.1| exodeoxyribonuclease III [Neisseria meningitidis ES14902]
 gi|325141356|gb|EGC63839.1| exodeoxyribonuclease III [Neisseria meningitidis 961-5945]
 gi|325143494|gb|EGC65815.1| exodeoxyribonuclease III [Neisseria meningitidis M01-240013]
 gi|325199171|gb|ADY94627.1| exodeoxyribonuclease III [Neisseria meningitidis G2136]
 gi|325206984|gb|ADZ02437.1| exodeoxyribonuclease III [Neisseria meningitidis M04-240196]
          Length = 259

 Score =  174 bits (442), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 64/264 (24%), Positives = 120/264 (45%), Gaps = 13/264 (4%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++ + + NVN IR+        +I  +  DI+C+QE K ++ +   +       H     
Sbjct: 1   MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADLSADMKNPHGMHGHWHC 60

Query: 62  --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             ++ Y+GVA+ SK +P  +   +  ++ D + RF+   F      L + +LYLP G+  
Sbjct: 61  AEKRGYSGVAVYSKRKPDNVQIGMGIEEFDREGRFVRCDFD----RLSVISLYLPSGSSA 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +   K  ++  F             ++  GD+NI  Q  D  N    + ++ F  E 
Sbjct: 117 EERQQV-KYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEE 175

Query: 180 RQSF-QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R+   + +  +G+TD  R  +     Y++W     +++K+ G RID+ M++PE  +   S
Sbjct: 176 REWIGKVIHKLGWTDMWRTLYPDVPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVS 235

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
           A +        K SDH P+++  D
Sbjct: 236 AHVYKD----EKFSDHAPLVMEYD 255


>gi|239631265|ref|ZP_04674296.1| exonuclease III [Lactobacillus paracasei subsp. paracasei 8700:2]
 gi|239525730|gb|EEQ64731.1| exonuclease III [Lactobacillus paracasei subsp. paracasei 8700:2]
          Length = 252

 Score =  174 bits (442), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 64/257 (24%), Positives = 108/257 (42%), Gaps = 12/257 (4%)

Query: 4   VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +         E + D  CLQETK +      + L   + +     +
Sbjct: 1   MKLISWNVNGLRAVLKKEFMTIFNELDADWFCLQETKMQAGQVELD-LPGYHQYFNYAER 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K++P+ +   +   + D + R I   +                   +   
Sbjct: 60  KGYSGTAIFTKHEPLNVTYGMGVPEHDTEGRIITLEYPNFYLMTVYTPNSGGELKRLDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +         +     + +L  ++PL++ GD N+  Q  D  N     ++A FT E R  
Sbjct: 120 QQ------WDKDFLAYTNQLAAKKPLVYCGDLNVAHQEIDLKNDKTNHHNASFTDEERAD 173

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F K  + GF D  R  +     YS+W Y   + + N G RID+ + S +    +  A+I 
Sbjct: 174 FTKQLDSGFIDTFRNLYPDTVTYSWWSYRFHARANNAGWRIDYFVSSRDFKPYIQDAKIL 233

Query: 243 TKPRGWTKPSDHTPVIV 259
           T   G    SDH PV +
Sbjct: 234 TDIMG----SDHCPVEL 246


>gi|296313703|ref|ZP_06863644.1| exodeoxyribonuclease III [Neisseria polysaccharea ATCC 43768]
 gi|296839722|gb|EFH23660.1| exodeoxyribonuclease III [Neisseria polysaccharea ATCC 43768]
          Length = 259

 Score =  174 bits (442), Expect = 9e-42,   Method: Composition-based stats.
 Identities = 64/264 (24%), Positives = 119/264 (45%), Gaps = 13/264 (4%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++ + + NVN IR+        +I  +  DI+C+QE K ++ +   +       H     
Sbjct: 1   MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADLSADMKNPHGMHGYWHC 60

Query: 62  --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             ++ Y+GVA+  K +P  +   +  ++ D + RF+   F      L + +LYLP G+  
Sbjct: 61  AEKRGYSGVAVYGKRKPDNVQIGMGIEEFDREGRFVRCDFG----RLSVISLYLPSGSSA 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +   K  ++  F             ++  GD+NI  Q  D  N    + ++ F  E 
Sbjct: 117 EERQQV-KYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEE 175

Query: 180 RQSF-QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R+   + +  +G+TD  R  +  +  Y++W     +++K+ G RID+ M++PE      S
Sbjct: 176 REWIGKVIHKLGWTDMWRTLYPDNPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAVKAVS 235

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
           A +        K SDH P++V  D
Sbjct: 236 AHVYKD----EKFSDHAPLVVEYD 255


>gi|167004926|ref|ZP_02270684.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni
           81-176]
          Length = 252

 Score =  174 bits (442), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 62/262 (23%), Positives = 97/262 (37%), Gaps = 12/262 (4%)

Query: 4   VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA    N   WI +   D I  QE K  +  FP +  +    H+     
Sbjct: 1   MKLLSWNVNGLRAICDKNALDWIAQEKIDFIGFQEIKAHEDKFPKKIYEYPFKHMYFNSA 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K      ++S       V      D +           I    +   N            
Sbjct: 61  KRAGYSGVMSLCNFDSEVKKCEFFDDEEGRVLEHRFKNIALFNIYFPN------GQKDEE 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           + + K+ +   FL +  + L+    +I  GD N   +  D  +P    N + F    R  
Sbjct: 115 RLNFKMKFYADFLVYLDKLLKDGFEIIICGDVNTAHKEIDLTHPKANANTSGFLPIERAW 174

Query: 183 FQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
              L  +GF D  R  + +    YS+W Y   +  +N G RID+  +S      L +A I
Sbjct: 175 IDDLLKLGFIDTFREINGEIKEKYSWWSYRMKARERNVGWRIDYFFISKGLKDKLKNAFI 234

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
                G    SDH PV + +DI
Sbjct: 235 RDDIFG----SDHAPVGIEIDI 252


>gi|304388714|ref|ZP_07370772.1| exodeoxyribonuclease III [Neisseria meningitidis ATCC 13091]
 gi|304337278|gb|EFM03454.1| exodeoxyribonuclease III [Neisseria meningitidis ATCC 13091]
          Length = 259

 Score =  174 bits (442), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 64/264 (24%), Positives = 120/264 (45%), Gaps = 13/264 (4%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++ + + NVN IR+        +I  +  DI+C+QE K ++ +   +       H     
Sbjct: 1   MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADLSADMKNPHGMHGHWHC 60

Query: 62  --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             ++ Y+GVA+ SK +P  +   +  ++ D + RF+   F      L + +LYLP G+  
Sbjct: 61  AEKRGYSGVAVYSKRKPDNVQIGMGIEEFDREGRFVRCDFG----RLSVISLYLPSGSSA 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +   K  ++  F             ++  GD+NI  Q  D  N    + ++ F  E 
Sbjct: 117 EERQQV-KYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEE 175

Query: 180 RQSF-QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R+   + +  +G+TD  R  +     Y++W     +++K+ G RID+ M++PE  +   S
Sbjct: 176 REWIGKVIHKLGWTDMWRTLYPDVPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKALS 235

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
           A +        K SDH P+++  D
Sbjct: 236 AHVYKD----EKFSDHAPLVMEYD 255


>gi|332024107|gb|EGI64323.1| Recombination repair protein 1 [Acromyrmex echinatior]
          Length = 356

 Score =  174 bits (442), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 74/263 (28%), Positives = 119/263 (45%), Gaps = 13/263 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFET-LQSLNYHIETCG 61
           + + TWNV+ IRA I  +   +I + + DII LQETK +    P E  L   +++     
Sbjct: 104 LKICTWNVSGIRAVIKKHGLDYITKEDADIIALQETKCDKGKMPDEVKLPGYHHYFLDSK 163

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +  Y GVA+ SK +PI +   L     D + R I   F    +   I       G  + +
Sbjct: 164 KPGYCGVALFSKEKPISVKYGLNDSTFDTEGRIITVEFP---EFFVINVYVPNAGQKLVT 220

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
                + + + +        L+ ++P+I  GD N+  Q  D  NP     +A FT E R 
Sbjct: 221 LPKRLEWNKLFKKHIEE---LDQKKPVIICGDMNVAHQEIDLKNPKTNTKNAGFTKEERN 277

Query: 182 SFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
                   GF D  R+ +      Y+FW Y+A++ SKN G R+D+ ++S    + +    
Sbjct: 278 DMTDFLAAGFIDTFRSLYPEIEGAYTFWSYFANARSKNIGWRLDYFLISERIKNKVCDNI 337

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263
           I     G    SDH PVI+ +++
Sbjct: 338 IRKDVYG----SDHCPVILYINL 356


>gi|149278217|ref|ZP_01884355.1| exodeoxyribonuclease III [Pedobacter sp. BAL39]
 gi|149230983|gb|EDM36364.1| exodeoxyribonuclease III [Pedobacter sp. BAL39]
          Length = 256

 Score =  174 bits (441), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 75/264 (28%), Positives = 123/264 (46%), Gaps = 14/264 (5%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFET--LQSLNYHIETC 60
           + + ++NVN IR+    N   W++  + D++CLQE K      P     ++ L YH    
Sbjct: 1   MKIISYNVNGIRSASTKNFLGWLQAMDADMVCLQEVKALPSQIPELLVLIEQLGYHHYWF 60

Query: 61  G--QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
              +K Y+GVAIL++ +P  +      + +D + R + A F        + +LY+P G+ 
Sbjct: 61  PAEKKGYSGVAILTRIKPNHVEYGCGEEWIDKEGRILRADFDT----FSLMSLYMPSGS- 115

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
               +   K  +++ F  +  Q  +    LI +GDYNI     D +NP    N + F  E
Sbjct: 116 SGDERQTKKYEFMRFFDTYTEQLRKEIPNLIISGDYNICHTAIDIHNPKSNANSSGFLPE 175

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
            R+  +   N GF D  R  +   H Y++W + A S SKN G RID+ + +      L +
Sbjct: 176 EREWMELFLNNGFIDTFRHFNKDPHHYTWWSFRAGSRSKNLGWRIDYHLATVPMLDRLKN 235

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
             I          SDH PV++ L+
Sbjct: 236 VTILADA----VHSDHCPVLLELN 255


>gi|116494506|ref|YP_806240.1| exonuclease III [Lactobacillus casei ATCC 334]
 gi|191637944|ref|YP_001987110.1| Exodeoxyribonuclease III [Lactobacillus casei BL23]
 gi|227535523|ref|ZP_03965572.1| exodeoxyribonuclease III [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
 gi|116104656|gb|ABJ69798.1| Exonuclease III [Lactobacillus casei ATCC 334]
 gi|190712246|emb|CAQ66252.1| Exodeoxyribonuclease III [Lactobacillus casei BL23]
 gi|227186845|gb|EEI66912.1| exodeoxyribonuclease III [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
 gi|327382014|gb|AEA53490.1| Exodeoxyribonuclease III [Lactobacillus casei LC2W]
 gi|327385172|gb|AEA56646.1| Exodeoxyribonuclease III [Lactobacillus casei BD-II]
          Length = 252

 Score =  174 bits (441), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 64/257 (24%), Positives = 108/257 (42%), Gaps = 12/257 (4%)

Query: 4   VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +         E + D  CLQETK +      + L   + +     +
Sbjct: 1   MKLISWNVNGLRAVLKKDFMTIFNELDADWFCLQETKMQAGQVELD-LPGYHQYFNYAER 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K++P+ +   +   + D + R I   +                   +   
Sbjct: 60  KGYSGTAIFTKHEPLNVTYGMGVPEHDTEGRIITLEYPNFYLMTVYTPNSGGELKRLDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +         +     + +L  ++PL++ GD N+  Q  D  N     ++A FT E R  
Sbjct: 120 QQ------WDKDFLAYTNQLAAKKPLVYCGDLNVAHQEIDLKNDKTNHHNAGFTDEERAD 173

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F K  + GF D  R  +     YS+W Y   + + N G RID+ + S +    +  A+I 
Sbjct: 174 FTKQLDSGFIDTFRNLYPDTVTYSWWSYRFHARANNAGWRIDYFVSSRDFKPYIQDAKIL 233

Query: 243 TKPRGWTKPSDHTPVIV 259
           T   G    SDH PV +
Sbjct: 234 TDIMG----SDHCPVEL 246


>gi|300692854|ref|YP_003753849.1| exodeoxyribonuclease III/endonuclease/phosphatase [Ralstonia
           solanacearum PSI07]
 gi|299079914|emb|CBJ52591.1| putative exodeoxyribonuclease III/endonuclease/phosphatase
           [Ralstonia solanacearum PSI07]
          Length = 261

 Score =  174 bits (441), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 58/264 (21%), Positives = 112/264 (42%), Gaps = 12/264 (4%)

Query: 3   VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IET 59
           ++ + + N+N +R A       W+ + + D +C+QE K    +   E L    YH   + 
Sbjct: 1   MLRIISANLNGVRSAASKGFFDWMGKQDADFVCVQELKCAQDDMTPEFLAPHGYHGVFQH 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G  + ++++P +++    G + D + R++EA +      L I ++Y+P G+  
Sbjct: 61  AVKKGYSGAGLYARHKPDDVIVGFDGGEFDAEGRYVEARYG----KLSIISVYVPSGSSG 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +                 R E    ++  GD NI+ +  D  N    + ++    E 
Sbjct: 117 EERQQAKYRFMDLFMQHLVDLRHEKGREVVLCGDVNIVHKEIDIKNWKGNQKNSGCLPEE 176

Query: 180 RQSFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R    +L +  G+ D  R        Y++W     +++KN G RID+ + +P   +    
Sbjct: 177 RAWLTRLFDEVGYVDVFRTLDPRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGIATTARR 236

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
             +        K SDH P+ V  D
Sbjct: 237 TSVFKDI----KFSDHAPLTVDYD 256


>gi|220930682|ref|YP_002507591.1| exodeoxyribonuclease III Xth [Clostridium cellulolyticum H10]
 gi|220001010|gb|ACL77611.1| exodeoxyribonuclease III Xth [Clostridium cellulolyticum H10]
          Length = 253

 Score =  174 bits (441), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 70/263 (26%), Positives = 120/263 (45%), Gaps = 13/263 (4%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFE-TLQSLNYHIETC 60
           +  + +WNVN +RA I      + KE + DI C+QETK ++     E  L+    +    
Sbjct: 1   MTKLVSWNVNGLRACIGKGFWDFFKEVDSDIFCIQETKLQEGQVELEQELEGYEQYWNYA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+G AI +K +P+     +  ++ D + R I   F                 +   
Sbjct: 61  VKKGYSGTAIFTKIKPVSSSCGIGIEEHDNEGRVITLEFDQ-----YFLVNVYTPNSKRE 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             + + ++ W   F  +  Q LE  +P+I  GD N+  +  D  NP   +  A FT+E R
Sbjct: 116 LERLEYRMKWEDDFRIYLKQ-LEETKPVIICGDMNVAHKEIDIKNPRSNKRSAGFTMEER 174

Query: 181 QSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           + F +L   GF D+ R  +      Y++W Y   +  +N G RID+  +S    +++  A
Sbjct: 175 EKFSELLEQGFVDSYRTLYPDKTGAYTWWSYMFKARERNVGWRIDYFCVSEVLKNIIEEA 234

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
            I ++  G    SDH PV +++ 
Sbjct: 235 DIYSEIMG----SDHCPVGLTIK 253


>gi|116333326|ref|YP_794853.1| exonuclease III [Lactobacillus brevis ATCC 367]
 gi|116098673|gb|ABJ63822.1| Exonuclease III [Lactobacillus brevis ATCC 367]
          Length = 254

 Score =  174 bits (441), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 65/259 (25%), Positives = 108/259 (41%), Gaps = 13/259 (5%)

Query: 4   VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA          +E N D   +QETK +      + L     +     +
Sbjct: 1   MKFISWNVNGLRAIVKKGFVETFQELNADFFGIQETKLQAGQIELD-LPGYYQYWNYAER 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G A+ +K+QP+ ++  +   + D + R I   +        +       G+ +   
Sbjct: 60  KGYSGTALFTKHQPLNVIYGIDAPEFDHEGRAITLEYP---DFYVLTCYTPNSGSGLKRL 116

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
            +       +       Q+L+ ++P+IF GD N+     D  NP    ++A FT E R  
Sbjct: 117 DFR---LGWEHAFLTFIQKLDAQKPVIFCGDLNVAHTEIDLKNPKTNHHNAGFTDEERAK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
              L   G+TD  R  +      YS+W Y   +   N G RID+ + S    + L  A+I
Sbjct: 174 MTALLAAGYTDTFRYFNPDVTERYSWWSYRFHARDNNAGWRIDYFITSQRLQNHLQDAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVS 260
             +  G    SDH PV + 
Sbjct: 234 LDQIMG----SDHCPVELD 248


>gi|307324263|ref|ZP_07603471.1| exodeoxyribonuclease III Xth [Streptomyces violaceusniger Tu 4113]
 gi|306889994|gb|EFN20972.1| exodeoxyribonuclease III Xth [Streptomyces violaceusniger Tu 4113]
          Length = 282

 Score =  174 bits (441), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 57/262 (21%), Positives = 94/262 (35%), Gaps = 6/262 (2%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           V+TV T NVN +RA        W+     D++CLQE + E K  P    +   +H+    
Sbjct: 16  VLTVTTVNVNGLRAAAKKGFGPWLDATAADVVCLQEVRAEPKELPEAVREPDGWHVVHAP 75

Query: 62  Q--KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
              K   GV++ ++ +   +       + D   R++E      T    +       G   
Sbjct: 76  AAAKGRAGVSVYARRELEGVRVGFGSSEFDGSGRYVEVDLPGVTVG-SLYLPSGEVGTDR 134

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K      ++        +        + AGD+NI  Q  D  N    +  + F  E 
Sbjct: 135 QDEKERFMAEFLPYLKELRERAAAGGREALVAGDWNIAHQEADLKNWKANQKKSGFLPEE 194

Query: 180 RQSFQKLQNM--GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
           R     +               D    YS+W Y   ++  + G RID+ + +P       
Sbjct: 195 RAWLTSVFEEAGYVDVVRALHPDVAGPYSWWSYRGRAFDNDAGWRIDYQIATPGLAGRAV 254

Query: 238 SARIDTKPRGWTKPSDHTPVIV 259
            A ++  P    + SDH PV V
Sbjct: 255 KAVVERAPAYDQRWSDHAPVTV 276


>gi|296532202|ref|ZP_06894954.1| exodeoxyribonuclease III [Roseomonas cervicalis ATCC 49957]
 gi|296267473|gb|EFH13346.1| exodeoxyribonuclease III [Roseomonas cervicalis ATCC 49957]
          Length = 268

 Score =  174 bits (441), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 67/269 (24%), Positives = 100/269 (37%), Gaps = 7/269 (2%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIET 59
           M  + + TWN+NS+R R+  L   ++E  PD++CLQETK  D+ FP E L +L Y H   
Sbjct: 1   MPNLRLLTWNINSVRLRMPLLTRLVQELEPDVVCLQETKCPDELFPHEPLAALGYAHRAV 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            G K YNG AILS+                                L    +    G+  
Sbjct: 61  RGMKGYNGTAILSRLPFAPRQDDPDWCAKGDCRHVGVDLDVPGGLELHDFYVP-AGGDIA 119

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL 177
                      +       +              GD NI P   D ++     +    T 
Sbjct: 120 DREANPKFAHKLDFVAEATAWNAARGPAKRAVMVGDLNIAPLECDVWSHRQLLDVVSHTP 179

Query: 178 EVRQS--FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATS 234
               +    +                  +Y++W Y A  W   ++G R+DH+ +S +   
Sbjct: 180 VEVAALTAWQQAGAWHDAIRHFVPPPEKVYTWWSYRARDWEASDRGRRLDHVWVSQDLAG 239

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            L    I    RGWT+ SDH PV+V L +
Sbjct: 240 SLRRHHIHKAARGWTQASDHVPVLVELAL 268


>gi|227512799|ref|ZP_03942848.1| exodeoxyribonuclease III [Lactobacillus buchneri ATCC 11577]
 gi|227083999|gb|EEI19311.1| exodeoxyribonuclease III [Lactobacillus buchneri ATCC 11577]
          Length = 252

 Score =  174 bits (441), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 67/258 (25%), Positives = 112/258 (43%), Gaps = 13/258 (5%)

Query: 4   VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +    A   ++ + D  C+QETK ++     + L     +     +
Sbjct: 1   MKFISWNVNGLRAVVKKDFAEIFQKLDADFFCIQETKMQEGQLKLD-LPGYRQYFNYAER 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +P+ +   +   + D + R I   +        + +     G  +   
Sbjct: 60  KGYSGTAIFAKDEPLTVSYGIQAPEFDHEGRAITLEYP---NFYLVTSYVPNSGAKLKRL 116

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
            +        +       +L+  +P+I  GD N+     D  NP    ++A FT E RQS
Sbjct: 117 DFR---MGWDKAFHAYLNQLDSHKPVILCGDLNVAHYEIDLKNPQSNHHNAGFTDEERQS 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F KL + GF D  R  +     +YS+W Y   S  +N G RID+ + S      +  ++I
Sbjct: 174 FTKLLDQGFMDTFRHFYPDKEDIYSWWSYRFHSRDRNAGWRIDYFVTSKRLADHISDSKI 233

Query: 242 DTKPRGWTKPSDHTPVIV 259
            T   G    SDH PV +
Sbjct: 234 LTDIFG----SDHCPVEL 247


>gi|163757409|ref|ZP_02164498.1| putative exodeoxyribonuclease iii protein [Hoeflea phototrophica
           DFL-43]
 gi|162284911|gb|EDQ35193.1| putative exodeoxyribonuclease iii protein [Hoeflea phototrophica
           DFL-43]
          Length = 270

 Score =  174 bits (441), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 66/265 (24%), Positives = 103/265 (38%), Gaps = 8/265 (3%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64
           V TWN+NS+R R+  +   ++   PD++CLQETK  +  FP    + + Y H+   GQK 
Sbjct: 5   VTTWNINSVRLRLPLVQHLLETVQPDVLCLQETKCPNDAFPSAAFRKIGYEHMAIHGQKG 64

Query: 65  YNGVAILSK----YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           Y+GVAILS+             +                 I      +          I 
Sbjct: 65  YHGVAILSRLPLSDDQRLSYCGIADARHVSAVVEAPGERRIRLHNFYVPAGGDEPNRDIN 124

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
                      +     A   L+     I  GD NI P   D ++          T    
Sbjct: 125 PKFGHKLDFIEEMRGLHAESELKDGISSILVGDLNIAPLETDVWSHKQLLKVVSHTPVET 184

Query: 181 QSFQKLQNMGFTDAIRATH--DTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLLH 237
           ++   +Q  G    +  TH      ++++W Y A  W + ++G R+DH+  S +    L 
Sbjct: 185 ENLTGMQQGGAWVDLIRTHIPPEEKVFTWWSYRAKDWAAADRGRRLDHVWSSADLADGLS 244

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLD 262
              +  + RGW +PSDH PV    D
Sbjct: 245 KIEVLREARGWERPSDHVPVTAHFD 269


>gi|134093450|ref|YP_001098525.1| putative nuclease [Herminiimonas arsenicoxydans]
 gi|133737353|emb|CAL60396.1| Putative Nuclease [Herminiimonas arsenicoxydans]
          Length = 259

 Score =  174 bits (441), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 60/265 (22%), Positives = 113/265 (42%), Gaps = 15/265 (5%)

Query: 3   VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59
           ++ + + N+N IR A       W+  ++ D IC+QE K ++ +   + L    Y  +   
Sbjct: 1   MLKIVSANLNGIRSAAKKGFFQWMARHSADYICVQELKAQEADMTPDFLTPEGYFGYFHY 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G  +  K +P  +       + D + R+++  F      L + ++Y P G+  
Sbjct: 61  AEKKGYSGAGVYCKTKPDNVQIGFNCPEFDAEGRYVQCDFG----NLSVISVYCPSGS-S 115

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +   K  ++  FL    +        +  GD+NI     D  N      ++ F  E 
Sbjct: 116 GEERQQAKFRFMDVFLPHLLELKSQGREFVICGDWNIAHNEIDLKNYKGNRKNSGFLPEE 175

Query: 180 RQSFQKLQNM-GFTDAIRATHD--THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
           R+   ++ +  G  D  R  H   T   Y++W     +++KN G RID+ + +P   +  
Sbjct: 176 REWLTRVFDEVGLVDVYRRLHPGTTEECYTWWSNRGQAYAKNVGWRIDYQVATPSLAARA 235

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSL 261
           H+A I    R     SDH P+ ++ 
Sbjct: 236 HAAEIYKVER----FSDHAPLTITY 256


>gi|134095562|ref|YP_001100637.1| putative exodeoxyribonuclease III [Herminiimonas arsenicoxydans]
          Length = 237

 Score =  174 bits (441), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 91/242 (37%), Positives = 133/242 (54%), Gaps = 5/242 (2%)

Query: 21  LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80
           +  W+ +N  D++CLQETKT D+ FP   +++  Y +   GQK+YNGVAILS++   ++ 
Sbjct: 1   MQQWLVDNPVDVLCLQETKTVDEKFPVAEIEAAGYQVAFTGQKTYNGVAILSRHPITDVT 60

Query: 81  THLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQ 140
            + P  D + Q            Q +RI   Y+P+G    S KY  K++W+K    + +Q
Sbjct: 61  KNNPLLDDEQQRII-----AGTIQGIRIVCAYVPNGQSPDSDKYIYKLNWLKALHEWLAQ 115

Query: 141 RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHD 200
             +    L   GDYNI P+  D ++P  W      +   R +F +LQ MGFTDA R    
Sbjct: 116 EQQQHPELALLGDYNIAPEDRDVHDPAAWAGQVLVSEPERAAFVRLQEMGFTDAFRMFEQ 175

Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
              LYS+WDY    +  N+G+RIDHI+LS    +   +  ID  PR W +PSDHTPVI +
Sbjct: 176 PEKLYSWWDYRQMGFRLNRGLRIDHILLSAPLAARCSACVIDKVPRKWEQPSDHTPVIAT 235

Query: 261 LD 262
           +D
Sbjct: 236 ID 237


>gi|254671628|emb|CBA09333.1| putative endonuclease [Neisseria meningitidis alpha153]
          Length = 259

 Score =  174 bits (441), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 64/264 (24%), Positives = 120/264 (45%), Gaps = 13/264 (4%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++ + + NVN IR+        +I  +  DI+C+QE K ++ +   +       H     
Sbjct: 1   MLKIISANVNGIRSAYKKGFYEYIATSGADIVCVQELKAQEADLSADMKNPHGMHGHWHC 60

Query: 62  --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             ++ Y+GVA+ SK +P  +   +  ++ D + RF+   F      L + +LYLP G+  
Sbjct: 61  AEKRGYSGVAVYSKRKPDNVQIGMGIEEFDREGRFVRCDFD----RLSVISLYLPSGSSA 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +   K  ++  F             ++  GD+NI  Q  D  N    + ++ F  E 
Sbjct: 117 EERQQV-KYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEE 175

Query: 180 RQSF-QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R+   + +  +G+TD  R  +     Y++W     +++K+ G RID+ M++PE  +   S
Sbjct: 176 REWIGKVIHKLGWTDMWRTLYPDVPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVS 235

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
           A +        K SDH P+++  D
Sbjct: 236 AHVYKD----EKFSDHAPLVMEYD 255


>gi|206895175|ref|YP_002247534.1| exodeoxyribonuclease III [Coprothermobacter proteolyticus DSM 5265]
 gi|206737792|gb|ACI16870.1| exodeoxyribonuclease III [Coprothermobacter proteolyticus DSM 5265]
          Length = 250

 Score =  174 bits (441), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 78/258 (30%), Positives = 132/258 (51%), Gaps = 13/258 (5%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + VAT+NVN IRAR+ +++  ++   PD++CLQE K E+  FP++  +   Y     GQK
Sbjct: 1   MKVATFNVNGIRARLDSISELMQMEAPDVLCLQEIKCENDLFPYDFFKD--YQCYVNGQK 58

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +YNGV+I S+ + +          + V       T  +      I N+Y PHG+   S +
Sbjct: 59  AYNGVSICSRKEGV---------PVVVLEEVESRTLGLVLGDTLIVNVYAPHGDLRGSPR 109

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  KI W K F +   + L     ++  GD+NI  + +D ++PI+ ++      E R++ 
Sbjct: 110 FFQKIQWYKAFSKRMEELLRRYPKVLIVGDFNIALKDNDVWDPILLKDTVGTFPEEREAL 169

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + L ++GF D  RA +     +++WDY      KN+G+RID++  S      +    +  
Sbjct: 170 KALLSVGFVDVFRAIYPEKVQFTWWDYRQGRMWKNQGMRIDYVFSSETLMPSIEDVYVVE 229

Query: 244 KPRGW--TKPSDHTPVIV 259
           + R     KPSDH PV+ 
Sbjct: 230 EIRKRRNPKPSDHAPVVC 247


>gi|114329634|gb|ABI58270.1| exodeoxyribonuclease [Streptomyces coelicolor A3(2)]
          Length = 267

 Score =  174 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 51/267 (19%), Positives = 99/267 (37%), Gaps = 8/267 (2%)

Query: 3   VVTVATWNVNSI-RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++TV + NVN +  A       W+   + D++CLQE + E    P        +H+    
Sbjct: 1   MLTVTSVNVNGLLAAAKKGFVEWLAGTSADVLCLQEVRAEPHQLPDHAGAPEGWHVTHAP 60

Query: 62  Q--KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
              K   GV++ ++ +P  +       + D   R++EA     T    +       G   
Sbjct: 61  AAAKGRAGVSLYTRREPDAVRVGFGSTEFDTSGRYVEADLPGVTVA-SLYLPSGEVGTER 119

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K      ++        +       ++  GD+NI  +  D  N    + ++ F  E 
Sbjct: 120 QDEKVRFMGEFLAYLKELRERAAAQGREVVVCGDWNIAHREADLKNWRANKKNSGFLPEE 179

Query: 180 RQSFQKLQNMGFTDAIRA----THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
           R+   ++ +      +        D    YS+W Y   ++  + G RID+ + +P   + 
Sbjct: 180 REWLGRVLDPAEGGYVDVVRALHPDVEGPYSWWSYRGRAFGNDAGWRIDYHVSTPGLAAK 239

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262
                ++       + SDH PV V  +
Sbjct: 240 AVKGYVERAATHAERWSDHAPVTVVYN 266


>gi|227522924|ref|ZP_03952973.1| exodeoxyribonuclease III [Lactobacillus hilgardii ATCC 8290]
 gi|227089953|gb|EEI25265.1| exodeoxyribonuclease III [Lactobacillus hilgardii ATCC 8290]
          Length = 252

 Score =  174 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 67/258 (25%), Positives = 112/258 (43%), Gaps = 13/258 (5%)

Query: 4   VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +    A   ++ + D  C+QETK ++     + L     +     +
Sbjct: 1   MKFISWNVNGLRAVVKKDFAEIFQKLDADFFCIQETKMQEGQLKLD-LPGYRQYFNYAER 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +P+ +   +   + D + R I   +        + +     G  +   
Sbjct: 60  KGYSGTAIFAKDEPLTVSYGIQAPEFDHEGRAITLEYP---NFYLVTSYVPNSGAKLKRL 116

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
            +        +       +L+  +P+I  GD N+     D  NP    ++A FT E RQS
Sbjct: 117 DFR---MGWDKAFHAYLNQLDSHKPVILCGDLNVAHHEIDLKNPQSNHHNAGFTDEERQS 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F KL + GF D  R  +     +YS+W Y   S  +N G RID+ + S      +  ++I
Sbjct: 174 FTKLLDQGFMDTFRHFYPDKEDIYSWWSYRFHSRDRNAGWRIDYFVTSKRLADHISDSKI 233

Query: 242 DTKPRGWTKPSDHTPVIV 259
            T   G    SDH PV +
Sbjct: 234 LTDIFG----SDHCPVEL 247


>gi|84687987|ref|ZP_01015851.1| exodeoxyribonuclease III, putative [Maritimibacter alkaliphilus
           HTCC2654]
 gi|84664019|gb|EAQ10519.1| exodeoxyribonuclease III, putative [Rhodobacterales bacterium
           HTCC2654]
          Length = 262

 Score =  174 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 83/268 (30%), Positives = 120/268 (44%), Gaps = 11/268 (4%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIET 59
           MS  T+ATWN+NS+R R   ++  + +  PD++CLQE K+     P +  ++  Y H+  
Sbjct: 1   MS-FTLATWNINSVRLRADLVSRLLADEAPDVLCLQECKSPVDKIPHDIFKARGYTHMVA 59

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            GQK YNGVAILSK    +      GD    +              + I N Y+P G   
Sbjct: 60  RGQKGYNGVAILSKLPLED-----AGDQDFARLGHARHIAAKLENGVTIHNFYVPAGGDK 114

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL 177
              + ++K      +L         E+P      GD NI P+  D +N          T 
Sbjct: 115 PDREINEKFGQKLDYLTEMRDWFHAEKPEKAILVGDLNIAPREDDVWNHKQLLKIVSHTP 174

Query: 178 -EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSL 235
            EV           + D  R       LYS+W Y +  W   +KG R+DHI  +P+ ++ 
Sbjct: 175 VEVEHLGAAQDAGKWVDITRQDIPEGLLYSWWSYRSPDWDTADKGRRLDHIWATPDISNA 234

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            H +RI    RGW KPSDH PV  + D+
Sbjct: 235 AHGSRILRDVRGWEKPSDHAPVFATFDL 262


>gi|222823091|ref|YP_002574664.1| exodeoxyribonuclease III [Campylobacter lari RM2100]
 gi|222538312|gb|ACM63413.1| exodeoxyribonuclease III [Campylobacter lari RM2100]
          Length = 252

 Score =  174 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 64/262 (24%), Positives = 98/262 (37%), Gaps = 12/262 (4%)

Query: 4   VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA    N   WI++ N D I  QE K  ++ FP    +    H+     
Sbjct: 1   MKLLSWNVNGLRAICDKNALDWIEKENIDFIGFQEIKAHEEKFPKRIYEYDFKHMYFNSA 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K      ++S              D D           I    +   N            
Sbjct: 61  KRAGYSGVMSLLNFDCETKKCEFFDDDEGRVLEHRFKNIALFNIYFPN------GQKDEE 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +   K+ +   FL +  + L+  + +I  GD N   +  D  +P   E  + F    R  
Sbjct: 115 RLSFKMKFYNDFLVYLDKLLKEGKEIIICGDVNTAHREIDLTHPKANEKTSGFLPIERAW 174

Query: 183 FQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
              L  +GF D  R  + D    YS+W Y   +  +N G RID+  +S      L +A I
Sbjct: 175 IDDLLELGFVDTFRYVNGDIKEKYSWWSYRMKARERNVGWRIDYFFISNGLKDKLKNAFI 234

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
                G    SDH PV + +DI
Sbjct: 235 RDDIFG----SDHAPVGIEIDI 252


>gi|86151219|ref|ZP_01069434.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|315123837|ref|YP_004065841.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|85841566|gb|EAQ58813.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|315017559|gb|ADT65652.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 252

 Score =  174 bits (440), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 60/262 (22%), Positives = 97/262 (37%), Gaps = 12/262 (4%)

Query: 4   VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA    N   WI +   D I  QE K  +  FP +  +    H+     
Sbjct: 1   MKLLSWNVNGLRAICDKNALDWIAQEKIDFIGFQEIKAHEDKFPKKIYEYPFKHMYFNSA 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K      ++S       V      + +           I    +   N            
Sbjct: 61  KRAGYSGVMSLCNFDSEVKKCEFFNDEEGRVLEHRFKNIALFNIYFPN------GQKDEE 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           + + K+ +   FL +  + L+    +I  GD N   +  D  +P    N + F    R  
Sbjct: 115 RLNFKMKFYADFLVYLDKLLKDGFEIIICGDVNTAHKEIDLTHPKANANTSGFLPIERAW 174

Query: 183 FQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
              L  +GF D  R  + +    YS+W Y   +  +N G RID+  +S      L +A I
Sbjct: 175 IDDLLKLGFIDTFREINGEIKEKYSWWSYRMKARERNVGWRIDYFFISKGLKDKLKNAFI 234

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
                G    SDH P+ + +DI
Sbjct: 235 RDDIFG----SDHAPIGIEIDI 252


>gi|108762443|ref|YP_632150.1| exodeoxyribonuclease III [Myxococcus xanthus DK 1622]
 gi|108466323|gb|ABF91508.1| exodeoxyribonuclease III [Myxococcus xanthus DK 1622]
          Length = 260

 Score =  174 bits (440), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 70/262 (26%), Positives = 111/262 (42%), Gaps = 9/262 (3%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60
           + V +WNVN +R+        W+      ++ LQE +      P +      +  H    
Sbjct: 1   MRVVSWNVNGLRSVHRKGFLPWLAGCRAQVVGLQEVRARADQLPDDVRSPSRWKTHFVAA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +  Y+GV + S+ +P E+VT L   +LDV+ R   A F   T  +  G     +G    
Sbjct: 61  ERPGYSGVGLYSRLEPDEVVTVLGVGELDVEGRLQIARFGKLT--VVNGYFPNGNGKDRD 118

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
            ++   K+++ +R      + L     ++  GD+N   Q  D   P      + F  E R
Sbjct: 119 LSRIPYKLTFYRRLFERLEKPLRDGGRVLVMGDFNTAHQEIDLARPKENRETSGFRPEER 178

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           + F +    G+ D  R  +     YS+W   A    KN G RID+++ SP A + +  A 
Sbjct: 179 EEFDRWIRAGWVDTFRHFNKGGGNYSWWSQRAGVREKNIGWRIDYVLASPAAMAYVRKAG 238

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I     G    SDH PV V LD
Sbjct: 239 IHPDVLG----SDHCPVSVDLD 256


>gi|207727621|ref|YP_002256015.1| exodeoxyribonuclease III protein [Ralstonia solanacearum MolK2]
 gi|206590860|emb|CAQ56472.1| exodeoxyribonuclease III protein [Ralstonia solanacearum MolK2]
          Length = 261

 Score =  174 bits (440), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 60/264 (22%), Positives = 112/264 (42%), Gaps = 12/264 (4%)

Query: 3   VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IET 59
           ++ + + N+N +R A       W+ + + D +C+QE K    +   E L    YH   + 
Sbjct: 1   MLRIISANLNGVRSAASKGFFDWMGKQDADFVCVQELKCAQDDMTPEFLAPHGYHGVFQH 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G  + +++QP +++    G + D + R++EA +      L I ++Y+P G+  
Sbjct: 61  AVKKGYSGAGLYARHQPDDVIVGFDGGEFDAEGRYVEARYG----KLSIISVYVPSGSSG 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +                 R E    ++  GD NI+ +  D  N    + ++    E 
Sbjct: 117 EERQQAKYRFMDLFMQHLVDLRHEKGREIVLCGDVNIVHKEIDIKNWKGNQKNSGCLPEE 176

Query: 180 RQSFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R    +L +  G+ D  R        Y++W     +++KN G RID+ + +P   +    
Sbjct: 177 RAWLTRLFDEVGYVDVFRTLDTRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGIAATARR 236

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
             I        K SDH P+ V  D
Sbjct: 237 TSIFRDI----KFSDHAPLTVDYD 256


>gi|133712474|gb|ABO37085.1| ExoA [Treponema paraluiscuniculi]
          Length = 264

 Score =  174 bits (440), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 57/267 (21%), Positives = 100/267 (37%), Gaps = 20/267 (7%)

Query: 5   TVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQS---------LN 54
            + +WNVN IRA    +  +W+    PD++CLQE K  +                     
Sbjct: 6   RIISWNVNGIRAIERXDFLSWLAREAPDVLCLQEIKAHESQLSAALRAPVWSAGAGGTYY 65

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
            +  +  +  Y+G A+ SK  P  +                     +   +    N    
Sbjct: 66  TYFHSAQRPGYSGTALFSKRAPDAVRFFGVPAFDCEGRMLAARFGELTVVSAYFPNAQ-- 123

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
                   +   K+ +   F  F  +     + +I  GDYNI  +  D  +P   E +  
Sbjct: 124 ----EGGKRLAYKLDFCAAFRAFCDEERTAGQHVILCGDYNIAHKEIDLAHPQENEGNPG 179

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
           F  + R         G+ D+ RA       Y++W Y A + ++N G RID+  +     +
Sbjct: 180 FLPQERAWMDTFTEAGYADSFRAFCTEGQQYTWWSYRARARARNIGWRIDYQCVDQAFLA 239

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261
            + S++I ++  G    SDH PV ++ 
Sbjct: 240 RVTSSQILSEVTG----SDHCPVCLTY 262


>gi|83950914|ref|ZP_00959647.1| exodeoxyribonuclease III, putative [Roseovarius nubinhibens ISM]
 gi|83838813|gb|EAP78109.1| exodeoxyribonuclease III, putative [Roseovarius nubinhibens ISM]
          Length = 262

 Score =  174 bits (440), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 84/263 (31%), Positives = 118/263 (44%), Gaps = 10/263 (3%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64
           +ATWN+NS+R R   +   + E  PD++CLQE K+  +  P    Q L Y H+   GQK 
Sbjct: 5   LATWNINSVRLREPIVCKLLAEEGPDVLCLQECKSPVEKIPTAAFQELGYHHMIARGQKG 64

Query: 65  YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124
           YNGVAILSK    ++     GD                   + I N Y+P G  +     
Sbjct: 65  YNGVAILSKLPIEDV-----GDRDFAALGHARHVAGRLENGVTIHNFYVPAGGDVPDRAV 119

Query: 125 DDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL-EVRQ 181
           ++K      +L         E P      GD NI P+  D +N          T  EV  
Sbjct: 120 NEKFGQKLDYLTEMRDWFHAERPEKSILVGDLNIAPREDDVWNHKQLLKVVSHTPVEVEH 179

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHSAR 240
             + +    ++D  RA      LYS+W Y A  W   +KG R+DH+  +P+  +  HS+R
Sbjct: 180 FNEVMDAGQWSDVTRADIPEGLLYSWWSYRARDWDVADKGRRLDHVWATPDIRNAAHSSR 239

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263
           +    RGW KPSDH PV    D+
Sbjct: 240 VLRDARGWEKPSDHAPVFAHFDL 262


>gi|88798725|ref|ZP_01114308.1| exodeoxyribonuclease III [Reinekea sp. MED297]
 gi|88778488|gb|EAR09680.1| exodeoxyribonuclease III [Reinekea sp. MED297]
          Length = 274

 Score =  174 bits (440), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 79/272 (29%), Positives = 130/272 (47%), Gaps = 11/272 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL-NYHIETCGQ 62
           + + ++N+N IRAR+H L      ++PDI+ LQE K     +P E + +      +  GQ
Sbjct: 1   MKIISFNINGIRARLHQLEELKATHDPDILSLQEIKVHSDLYPHEAVAAASGLVSQVHGQ 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS- 121
           K+++GVA LS+             + D +   +    T + + L + N Y P G      
Sbjct: 61  KAHHGVATLSRQPVPAEYGFPTDVEDDQRRLIVTRHPTADGRELVVINGYFPQGESNKHA 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD------CYNPIIWENDACF 175
           TK+  K  +    L +     + ++ LI  GD+NI P   D           + E  + F
Sbjct: 121 TKWPAKRKFYADLLTWLETHAKPDDLLIVLGDFNIAPVDEDIGIGEKNAKRWLREGKSAF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHL-YSFWDYYADSWSKN--KGIRIDHIMLSPEA 232
             E R+ F+KL+  G  D+ R  +      +S++DY +  +  +  +G+RIDH+M++   
Sbjct: 181 LPEEREWFEKLRAWGLVDSYRHLYPDSTELFSWFDYRSKGFDDDPKRGLRIDHLMITEPL 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
             L+ SA ID   RG  KPSDH P  + LD+P
Sbjct: 241 VPLIQSAGIDYHIRGMDKPSDHAPAWLELDLP 272


>gi|291333503|gb|ADD93201.1| exodeoxyribonuclease III [uncultured archaeon MedDCM-OCT-S08-C282]
          Length = 259

 Score =  174 bits (440), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 63/264 (23%), Positives = 109/264 (41%), Gaps = 9/264 (3%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI--ETC 60
           +   +WNVN +RA I   +  +  +   D++ LQET+T ++  P +      + +     
Sbjct: 1   MRFVSWNVNGLRAAIRKGIDGYFDDLKADVVMLQETRTLEEQLPKDWAWPTGWDVTLHPA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GVA  S      +     G      +        ++     +            
Sbjct: 61  EKKGYSGVATASTQAHAVVAKGKGGVFDSNDSEGRVLVCEVDG---VVCVNTYLPSGSNK 117

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   K  W++ + +F    L+   P++  GD NI     D +NP     ++ F    R
Sbjct: 118 DERQTFKEGWMEEWRQFIRPYLDDTRPVVVCGDLNIAHTEDDIWNPKGNARNSGFLPHER 177

Query: 181 QSFQKLQNMGFTDAIRAT-HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
             F  L   G+ DA R    D   +YS+W     + +K++G RID+ +L+P A   +   
Sbjct: 178 AWFSDLLADGWLDAFRHKVGDGAKVYSWWSNRGQARAKDRGWRIDYFLLNPAAAEAMVDC 237

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
            I  +  G    SDH PV++ LDI
Sbjct: 238 TIVRQ--GGIDVSDHAPVVLDLDI 259


>gi|255534152|ref|YP_003094524.1| exodeoxyribonuclease III Xth [Pedobacter heparinus DSM 2366]
 gi|255347136|gb|ACU06462.1| exodeoxyribonuclease III Xth [Pedobacter heparinus DSM 2366]
          Length = 256

 Score =  174 bits (440), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 73/264 (27%), Positives = 123/264 (46%), Gaps = 14/264 (5%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPF--ETLQSLNYHIETC 60
           + + ++NVN IR+    N   W++  + D+IC+QE K      P     ++ L YH    
Sbjct: 1   MKIISYNVNGIRSASTKNFFGWLQATDADMICMQEVKALPSQIPEIIALIEQLGYHHYWF 60

Query: 61  G--QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
              +K Y+GVAIL++ +P  +      + +D + R + A F        + ++YLP G+ 
Sbjct: 61  PAEKKGYSGVAILTRIKPNHVEYGCGEEWIDKEGRILRADFD----DFSLMSVYLPSGS- 115

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
               +   K  +++ F  + +   +    LI +GDYNI     D +NP    N + F  E
Sbjct: 116 SGDERQVKKYEFMRFFEAYITALRKTLPNLIISGDYNICHTAIDIHNPKSNANSSGFLPE 175

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
            R+  +   N GF D  R  +   H Y++W + A+S +KN G RID+ + +      L  
Sbjct: 176 EREWMELFLNGGFIDTFRHFNKDPHHYTWWSFRANSRAKNLGWRIDYHLATQAMLPKLKK 235

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
             I          SDH PV++ L+
Sbjct: 236 VSILADA----IHSDHCPVLLELN 255


>gi|81428949|ref|YP_395949.1| exodeoxyribonuclease III [Lactobacillus sakei subsp. sakei 23K]
 gi|78610591|emb|CAI55642.1| Exodeoxyribonuclease III [Lactobacillus sakei subsp. sakei 23K]
          Length = 254

 Score =  174 bits (440), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 69/259 (26%), Positives = 107/259 (41%), Gaps = 13/259 (5%)

Query: 4   VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +        ++ + D  CLQETK +      + L   + +     +
Sbjct: 1   MKFISWNVNGLRAVLKKDFMTTFEQFDADFFCLQETKMQAGQVELD-LPGYHQYFNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K++P+ +   +   + D + R I   +    Q   I        N +   
Sbjct: 60  KGYSGAAIFTKHEPLNVTYGIQQPEHDHEGRVITLEYP---QFFLITCYTPNSQNQLKRL 116

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
            Y        R        L  ++P+IF GD N+  +  D  N       A F+ E R  
Sbjct: 117 DYRMTWENAFRAYVQQ---LGTQKPVIFCGDLNVAHEAIDLKNDRTNHKSAGFSDEERVQ 173

Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
              L   GFTD  R  +     +YS+W Y   +   N G RID+ + S E    L  A+I
Sbjct: 174 MTTLLQSGFTDTFRYFYPDQTDIYSWWSYRFHARDNNAGWRIDYFITSDELQPKLMDAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVS 260
            T+  G    SDH PV + 
Sbjct: 234 HTEIYG----SDHCPVELD 248


>gi|148556689|ref|YP_001264271.1| exodeoxyribonuclease III Xth [Sphingomonas wittichii RW1]
 gi|148501879|gb|ABQ70133.1| exodeoxyribonuclease III Xth [Sphingomonas wittichii RW1]
          Length = 285

 Score =  173 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 75/267 (28%), Positives = 120/267 (44%), Gaps = 8/267 (2%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIET 59
           M+ + +A+WN+NS+RARI  +  +++E   DI+CLQETK  D  FPF   + L Y H E 
Sbjct: 23  MAKLKIASWNINSVRARIDIVRQFLEEQQIDILCLQETKVRDDTFPFGMFRDLGYDHFEI 82

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            GQ  ++GVAI+SK    +   H   D+ + +   +     I  + + +       G+  
Sbjct: 83  NGQPMHHGVAIISKLPLHDHGRHDWQDNGEARHVGVRLDCGIRLENVYV----PAGGDIA 138

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                      +    R      EL EP +  GD+NI P   D ++     +    T   
Sbjct: 139 DREVNPKFGQKLDFLGRMIRWSEELREPTLLVGDFNIAPLECDVWSHKQLLDVVSHTPIE 198

Query: 180 RQ--SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLL 236
            +     +  +               LY++W Y A  W + ++G R+DH+  SPE   L 
Sbjct: 199 VETLGRLQASHDWVDLGRSFVPPPARLYTWWSYRAQDWAASDRGRRLDHMWASPEVAKLA 258

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263
            +  +    R W +PSDH P+I  LD+
Sbjct: 259 TNHYVCEPCRSWIRPSDHIPLITELDV 285


>gi|146286032|sp|A1YES6|APEX1_GORGO RecName: Full=DNA-(apurinic or apyrimidinic site) lyase; AltName:
           Full=APEX nuclease; Short=APEN; AltName:
           Full=Apurinic-apyrimidinic endonuclease 1; Short=AP
           endonuclease 1; AltName: Full=REF-1; AltName: Full=Redox
           factor-1; Contains: RecName: Full=DNA-(apurinic or
           apyrimidinic site) lyase, mitochondrial
 gi|120974134|gb|ABM46644.1| APEX1 [Gorilla gorilla]
          Length = 318

 Score =  173 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 74/269 (27%), Positives = 126/269 (46%), Gaps = 17/269 (6%)

Query: 2   SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQ----SLNYH 56
           + + + +WNV+ +RA I      W+KE  PDI+CLQETK  +   P E  +    S  Y 
Sbjct: 60  ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSYQYW 119

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                ++ Y+GV +LS+  P+++   +  ++ D + R I A F      + +       G
Sbjct: 120 SAPXXKEGYSGVGLLSRQCPLKVSYGIGEEEHDQEGRVIVAEF---DSFVLVTAYVPNAG 176

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
             +   +Y  +     R      + L   +PL+  GD N+  +  D  NP   + +A FT
Sbjct: 177 RGLVRLEYRQRWDEAFRRF---LKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 233

Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E +   + LQ +   D+ R  +    + Y+FW Y  ++ SKN G R+D+ +LS     
Sbjct: 234 PQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLP 293

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            L  ++I +K  G    SDH P+ + L +
Sbjct: 294 ALCDSKIRSKALG----SDHCPITLYLAL 318


>gi|468371|gb|AAA21019.1| apurinic/apyrimidinic endonuclease [Rattus norvegicus]
          Length = 316

 Score =  173 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 73/269 (27%), Positives = 125/269 (46%), Gaps = 17/269 (6%)

Query: 2   SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN----YH 56
           + + + +WNV+ +RA I      W+KE  PDI+CLQETK  +   P E  +       Y 
Sbjct: 58  ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLTHQYW 117

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                ++ Y+GV +LS+  P+++   +  ++ D + R I A F      + +       G
Sbjct: 118 SAPSDKEGYSGVGLLSRQCPLKVSYGIGEEEHDQEGRVIVAEFE---SFILVTAYVPNAG 174

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
             +   +Y  +     R      + L   +PL+  GD N+  +  D  NP   + +A FT
Sbjct: 175 RGLVRLEYRQRWDEAFRKF---LKDLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 231

Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E +   + LQ +   D+ R  +    + Y+FW Y  ++ SKN G R+D+ +LS     
Sbjct: 232 PQEAQGFGEMLQAVPLADSFRHLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSQSLLP 291

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            L  ++I +K  G    SDH P+ + L +
Sbjct: 292 ALCDSKIRSKALG----SDHCPITLYLAL 316


>gi|163869207|ref|YP_001610459.1| exodeoxyribonuclease III [Bartonella tribocorum CIP 105476]
 gi|161018906|emb|CAK02464.1| exodeoxyribonuclease III [Bartonella tribocorum CIP 105476]
          Length = 271

 Score =  173 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 83/265 (31%), Positives = 123/265 (46%), Gaps = 9/265 (3%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQK 63
            +ATWN+NSIR R+  +  +++    D++CLQETK  D  FP E  ++  Y HI   GQK
Sbjct: 4   RIATWNINSIRLRLAQVFRYLELFPADVLCLQETKCPDALFPVEAFEAAGYKHIALSGQK 63

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           SYNGVAI+S+    ++         +   R+I     I+ ++LRI N Y+P G  I   +
Sbjct: 64  SYNGVAIVSRLPFKKVNKRFFCQ--NQDCRYISVIVEIHGRSLRIHNFYVPAGGDIPDAE 121

Query: 124 YDDKISWIKRF---LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EV 179
            ++K      F   + F     E     +  GD NI P   D ++          T  E 
Sbjct: 122 VNEKFRHKLDFLEEMSFIRADQEKGISSLLLGDLNIAPLAEDVWSHQQLLKVVSHTPIET 181

Query: 180 RQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLH 237
            +        G+ D +R        LY++W Y A  W+  + G R+DH+  SP+  S L 
Sbjct: 182 ERLQGLCCQGGWIDLMRLHIPVPTKLYTWWSYRARDWALTDYGRRLDHVWSSPDLASFLV 241

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLD 262
                   RGW +PSDH PV    +
Sbjct: 242 DLSTFRDARGWERPSDHIPVQTVFN 266


>gi|207742014|ref|YP_002258406.1| exodeoxyribonuclease III protein [Ralstonia solanacearum IPO1609]
 gi|206593400|emb|CAQ60327.1| exodeoxyribonuclease III protein [Ralstonia solanacearum IPO1609]
          Length = 261

 Score =  173 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 61/264 (23%), Positives = 112/264 (42%), Gaps = 12/264 (4%)

Query: 3   VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IET 59
           ++ + + N+N +R A       W+ + N D +C+QE K    +   E L    YH   + 
Sbjct: 1   MLRIISANLNGVRSAASKGFFDWMGKQNADFVCVQELKCAQDDMTPEFLAPHGYHGVFQH 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G  + +++QP +++    G + D + R++EA +      L I ++Y+P G+  
Sbjct: 61  AVKKGYSGAGLYARHQPDDVIVGFDGGEFDAEGRYVEARYG----KLSIISVYVPSGSSG 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +                 R E    ++  GD NI+ +  D  N    + ++    E 
Sbjct: 117 EERQQAKYRFMDLFMQHLVDLRHEKGREVVLCGDVNIVHKEIDIKNWKGNQKNSGCLPEE 176

Query: 180 RQSFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R    +L +  G+ D  R        Y++W     +++KN G RID+ + +P   +    
Sbjct: 177 RAWLTRLFDEVGYVDVFRTLDTRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGIAATARR 236

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
             I        K SDH P+ V  D
Sbjct: 237 TSIFRDI----KFSDHAPLTVDYD 256


>gi|307700400|ref|ZP_07637439.1| putative exodeoxyribonuclease III [Mobiluncus mulieris FB024-16]
 gi|307614385|gb|EFN93615.1| putative exodeoxyribonuclease III [Mobiluncus mulieris FB024-16]
          Length = 288

 Score =  173 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 64/288 (22%), Positives = 115/288 (39%), Gaps = 30/288 (10%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + ++TWN+NSIR+R+  +  ++  +N D++ +QE K     FP E   +  Y +   G  
Sbjct: 1   MRISTWNINSIRSRLPRVLKFLCRSNVDVLAMQEIKCRVSQFPVEAFLASGYQVFVNGLN 60

Query: 64  SYNGVAILSKYQPIEIVTH------LPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
            +NGVAI  +      V        +P                +    +   +LY+P+G 
Sbjct: 61  QWNGVAIAVRADLDAQVLGTEFSGKIPQPPFGKPPVVEPRALGVRVAGIECWSLYVPNGR 120

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEP--LIFAGDYNIIPQPHDCYNPIIWENDACF 175
            I +  +  K++W++     A   L        +F GD+NI P   D ++   +      
Sbjct: 121 EIDNPHFAYKLAWLEALRSHAHTLLAANPTALGLFMGDFNIAPCDEDVWDIQEFVGATHV 180

Query: 176 T----------------------LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD 213
           +                       E   S  +  +      +  T      +++WDY   
Sbjct: 181 SVPEREAFARLLQSDTLAQAVSLDETAISRIRTDSTNCGGLVEVTRQFAPGWTYWDYQKA 240

Query: 214 SWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
            W +N+G++ID  + +P     +  A I  + R   KPSDH PV++ L
Sbjct: 241 RWRRNQGMKIDFALATPNLADKITGAFIGREERDGEKPSDHVPVVLEL 288


>gi|187922338|ref|YP_001893980.1| exodeoxyribonuclease III Xth [Burkholderia phytofirmans PsJN]
 gi|187713532|gb|ACD14756.1| exodeoxyribonuclease III Xth [Burkholderia phytofirmans PsJN]
          Length = 259

 Score =  173 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 63/264 (23%), Positives = 111/264 (42%), Gaps = 14/264 (5%)

Query: 3   VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59
           ++ V T N+N IR A       W  E   D++C+QE K    +   E +   N+  + + 
Sbjct: 1   MLRVITANLNGIRSAAKKGFFDWFGEQKADVLCVQEIKCSQDDMTPEFMAPHNFTGYFQH 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G  + ++++P E+V     ++ D + R++E  F      L + ++Y+P G+  
Sbjct: 61  AVKKGYSGAGVYTRHEPDEVVIGFGSEEFDPEGRYVELRFG----KLSVISVYVPSGSSG 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +                  L  E  +I  GD NI+ +  D  N    + ++    E 
Sbjct: 117 DERQQA--KYRFMDEFMPHLAELSQEREVIVCGDVNIVHKEIDIKNWKSNQKNSGCLPEE 174

Query: 180 RQSFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R    KL +  G+ D  R        Y++W     +++KN G RID+ + +P   S    
Sbjct: 175 RAWLTKLFDEVGYVDVFRTLDQRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGIASKAKR 234

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
             +        K SDH P+ V  D
Sbjct: 235 TDVFRDI----KFSDHAPLTVDYD 254


>gi|32266427|ref|NP_860459.1| exodeoxyribonuclease LexA [Helicobacter hepaticus ATCC 51449]
 gi|32262477|gb|AAP77525.1| exodeoxyribonuclease LexA [Helicobacter hepaticus ATCC 51449]
          Length = 252

 Score =  173 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 77/261 (29%), Positives = 112/261 (42%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      +  E N DI C+QE+K   +   F   ++   +  +  +
Sbjct: 1   MKLISWNVNGLRACMNKGFMDFFNEVNADIFCIQESKMCKEQAQF-HFENYKEYWNSAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+GV ILSK QPI +   +     D + R I A +        + N+Y P+       
Sbjct: 60  KGYSGVVILSKTQPINVAYDMGITYHDKEGRIITAEYP----HFYLVNVYTPNSKRELER 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
              D     +   R   + LE  + +I  GD N+  Q  D  NP     +A FT E R  
Sbjct: 116 L--DYRMKWEDDFRAFVKNLENHKSVIICGDLNVAHQEIDLKNPKTNRRNAGFTDEERNK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
              L + GF D  R  + T    YS+W Y   +   N G RID+ + S   T  L  A I
Sbjct: 174 MSALLDAGFIDTFRYFYPTLTGAYSWWSYMGKARENNTGWRIDYFLCSQSLTPSLKDANI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
                G    SDH PV + L 
Sbjct: 234 YPHIFG----SDHCPVGLELK 250


>gi|126730406|ref|ZP_01746217.1| exodeoxyribonuclease III, putative [Sagittula stellata E-37]
 gi|126709139|gb|EBA08194.1| exodeoxyribonuclease III, putative [Sagittula stellata E-37]
          Length = 262

 Score =  173 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 84/268 (31%), Positives = 119/268 (44%), Gaps = 11/268 (4%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIET 59
           MS  T+ATWN+NS+R R   ++  ++E  PD++CLQE K+  +  P E    L Y ++  
Sbjct: 1   MS-FTLATWNINSVRLRKALVSKLMQEEAPDVLCLQECKSPVEKIPHEVFAELGYRYMVG 59

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            GQK YNGVAILS+    ++     GD                   + I N Y+P G   
Sbjct: 60  RGQKGYNGVAILSRLPLEDV-----GDKDFAALGHARHVAARLENGVTIHNFYVPAGGDE 114

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL 177
              + + K      +L         E P      GD NI P+  D ++          T 
Sbjct: 115 PDREKNIKFGQKLDYLTEMRDWFHTERPERAILVGDLNIAPREDDVWDHKKLLKIVSHTP 174

Query: 178 -EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSL 235
            EV          G+ D  R       L+S+W Y A  W   +KG R+DHI  +P+    
Sbjct: 175 IEVEHLGAAQDAGGWVDITRKDIPDGRLFSWWSYRAKDWDAADKGRRLDHIWATPDIADA 234

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            HS+RI    RGW +PSDH PV  + D+
Sbjct: 235 GHSSRILRAARGWEQPSDHAPVFATFDL 262


>gi|28493711|ref|NP_787872.1| exodeoxyribonuclease III [Tropheryma whipplei str. Twist]
 gi|28572897|ref|NP_789677.1| exodeoxyribonuclease III [Tropheryma whipplei TW08/27]
 gi|28411030|emb|CAD67415.1| exodeoxyribonuclease III [Tropheryma whipplei TW08/27]
 gi|28476753|gb|AAO44841.1| exodeoxyribonuclease III [Tropheryma whipplei str. Twist]
          Length = 269

 Score =  173 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 84/270 (31%), Positives = 130/270 (48%), Gaps = 14/270 (5%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSI+ R+  +  W+ EN  DI+ LQE K     FP E      Y     G  
Sbjct: 1   MRIATWNVNSIKTRLSQVLHWLTENEIDILALQEIKCRTNAFPAEVFMEHGYFCAAHGLG 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQAR--------FIEATFTINTQTLRIGNLYLPH 115
              GVAI+SK +P +I T + G                            +R+ ++Y+P+
Sbjct: 61  GREGVAIVSKSEPQDITTDVEGIPGYDDRNTGKQDKSDVQARIIAATVGGVRLYSVYVPN 120

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN-DAC 174
           G  + S  Y  K+ W++ F       +  E  L+ AGD+NI+    D  +P +  + D  
Sbjct: 121 GRDVHSPHYLYKLDWLEGFATHIRGVINTEPNLVIAGDFNIVLFDSDSNDPRVQTDTDVF 180

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
            T   RQ+F  L ++G  D +R T      ++FWDY A  + KN+G+RIDHI+ +    +
Sbjct: 181 RTPHERQAFYNLLDLGLRDLVRPTEP--EGFTFWDYRAGRFQKNEGLRIDHILGTDPIAN 238

Query: 235 LLHSARIDTKPRGWTK---PSDHTPVIVSL 261
            +  A+I  + R   +   PSDH PV++ L
Sbjct: 239 SVRFAKIHHEQRKGDEGKTPSDHVPVMIEL 268


>gi|307728165|ref|YP_003905389.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1003]
 gi|307582700|gb|ADN56098.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1003]
          Length = 259

 Score =  173 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 63/264 (23%), Positives = 111/264 (42%), Gaps = 14/264 (5%)

Query: 3   VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59
           ++ V T N+N IR A       W  E N D++C+QE K    +   E +   ++  + + 
Sbjct: 1   MLRVITANLNGIRSAAKKGFFDWFGEQNADVLCVQEIKCSQDDMTPEFMAPHDFTGYFQH 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G  + ++++P E+V     ++ D + R++E  F      L I ++Y+P G+  
Sbjct: 61  AVKKGYSGAGVYTRHEPDEVVIGFGSEEFDPEGRYVELRFG----KLSIVSVYVPSGSSG 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +                  L  E  +I  GD NI+ +  D  N    + ++    E 
Sbjct: 117 EERQQA--KYRFMDEFMPHLAGLAREREVIVCGDVNIVHKEIDIKNWKSNQKNSGCLPEE 174

Query: 180 RQSFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R    KL +  G+ D  R        Y++W     +++KN G RID+ + +P        
Sbjct: 175 RAWLTKLFDEVGYVDVFRTLDQRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGIAGKAKR 234

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
             +        K SDH P+ V  D
Sbjct: 235 TEVFRDI----KFSDHAPLTVDYD 254


>gi|84498021|ref|ZP_00996818.1| exodeoxyribonuclease III [Janibacter sp. HTCC2649]
 gi|84381521|gb|EAP97404.1| exodeoxyribonuclease III [Janibacter sp. HTCC2649]
          Length = 269

 Score =  173 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 53/268 (19%), Positives = 99/268 (36%), Gaps = 10/268 (3%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN---YHIET 59
           + + + NVN IRA        W+   + D+I LQE +  D     + L       +H+ +
Sbjct: 1   MRLISANVNGIRAAARRGGLEWLAMQHADVIALQEVRASDDQL-RDVLAQGGLAQWHVSS 59

Query: 60  CG--QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
                K + GVA+L++  P+ + + L   +     R++E         + + + Y+  G 
Sbjct: 60  AQGRTKGHAGVAVLTRQPPLRVSSDLGPQEFADAGRWLEVDVRGPEGPVTVISTYVHTGE 119

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
            +T    D+K  ++       +     +   +  GD NI     D  N       A F  
Sbjct: 120 ALTPK-QDEKFRFLDAVGSRLADLAVNDGYAVLTGDLNICHSADDLKNWKGNVGKAGFLP 178

Query: 178 EVRQSFQKLQNMGFTDAIRA--THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
           E +    +         +           Y++W +   ++  + G RID+   S     L
Sbjct: 179 EEQAHLDRWVGALAYADVHRALHGPGPGPYTWWSWRGKAFDNDAGWRIDYHFASAPLAKL 238

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              A +        + SDH P+ V  D+
Sbjct: 239 ATRADVGRASTYAERWSDHAPLTVDYDL 266


>gi|13162337|ref|NP_077062.1| DNA-(apurinic or apyrimidinic site) lyase [Rattus norvegicus]
 gi|1168468|sp|P43138|APEX1_RAT RecName: Full=DNA-(apurinic or apyrimidinic site) lyase; AltName:
           Full=APEX nuclease; Short=APEN; AltName:
           Full=Apurinic-apyrimidinic endonuclease 1; Short=AP
           endonuclease 1; AltName: Full=REF-1; AltName: Full=Redox
           factor-1; Contains: RecName: Full=DNA-(apurinic or
           apyrimidinic site) lyase, mitochondrial
 gi|11878235|gb|AAG40859.1|AF309114_1 nuclease APEX [Rattus norvegicus]
 gi|624915|dbj|BAA07938.1| APEX nuclease [Rattus norvegicus]
 gi|5360709|dbj|BAA82124.1| Apex nuclease [Rattus norvegicus]
 gi|50926078|gb|AAH78816.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Rattus
           norvegicus]
 gi|149033628|gb|EDL88426.1| apurinic/apyrimidinic endonuclease 1, isoform CRA_a [Rattus
           norvegicus]
          Length = 317

 Score =  173 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 73/269 (27%), Positives = 125/269 (46%), Gaps = 17/269 (6%)

Query: 2   SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN----YH 56
           + + + +WNV+ +RA I      W+KE  PDI+CLQETK  +   P E  +       Y 
Sbjct: 59  ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLTHQYW 118

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                ++ Y+GV +LS+  P+++   +  ++ D + R I A F      + +       G
Sbjct: 119 SAPSDKEGYSGVGLLSRQCPLKVSYGIGEEEHDQEGRVIVAEFE---SFILVTAYVPNAG 175

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
             +   +Y  +     R      + L   +PL+  GD N+  +  D  NP   + +A FT
Sbjct: 176 RGLVRLEYRQRWDEAFRKF---LKDLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 232

Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E +   + LQ +   D+ R  +    + Y+FW Y  ++ SKN G R+D+ +LS     
Sbjct: 233 PQERQGFGEMLQAVPLADSFRHLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLP 292

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            L  ++I +K  G    SDH P+ + L +
Sbjct: 293 ALCDSKIRSKALG----SDHCPITLYLAL 317


>gi|154244152|ref|YP_001415110.1| exodeoxyribonuclease III Xth [Xanthobacter autotrophicus Py2]
 gi|154158237|gb|ABS65453.1| exodeoxyribonuclease III Xth [Xanthobacter autotrophicus Py2]
          Length = 290

 Score =  173 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 66/270 (24%), Positives = 114/270 (42%), Gaps = 12/270 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62
           +T+ TWN+NS+R R+  + A ++   PDI+CLQETK +D  FP   ++ + + HI   GQ
Sbjct: 20  LTICTWNINSVRIRLDIVRAAVETLRPDILCLQETKCQDDKFPLAAIRDMGFPHIALNGQ 79

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-TQTLRIGNLYLPHGNPITS 121
           K ++GVA  S+   + +         D +   +         + L + N Y+P G  I  
Sbjct: 80  KGWHGVATFSRRPFVSVEKGDFCGKGDARHVAVTLAPEHALGKPLTVHNFYVPAGGDIPD 139

Query: 122 TKYDDKISWI-------KRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
            + + K +           +   A+   +     +  GD NI P   D +      N   
Sbjct: 140 PELNPKFAHKLAFLDEVTAWPPLAAAAADDGRHAVVVGDLNIAPLETDVWGHKQLLNVVS 199

Query: 175 FTLEVRQSFQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPE 231
            T    +   + Q                  L+++W Y +  + + ++G R+DH+  S  
Sbjct: 200 HTPVEVERLNRFQASGPWVDVMRTFVPPKDKLFTWWSYRSPDYTANDRGRRLDHVWASQS 259

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
                 +  +    RGW KPSDH PV ++ 
Sbjct: 260 LAPSAQAMTVLKDARGWEKPSDHVPVSLTF 289


>gi|291403439|ref|XP_002718079.1| PREDICTED: APEX nuclease 1 [Oryctolagus cuniculus]
          Length = 318

 Score =  173 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 75/269 (27%), Positives = 126/269 (46%), Gaps = 17/269 (6%)

Query: 2   SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN----YH 56
           + + + +WNV+ +RA I      WIKE  PDI+CLQETK  +   P E  +       Y 
Sbjct: 60  ATLKICSWNVDGLRAWIKKKGLDWIKEEAPDILCLQETKCSENKLPAELQELPGLPHQYW 119

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                ++ Y+GV +LS+  P+++   +  ++ D + R I A F      + +       G
Sbjct: 120 SAPSDKEGYSGVGLLSRQCPLKVSYGIGEEEHDQEGRVIVAEF---DAFVLVTAYVPNAG 176

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
             +   +Y  +     R      + L   +PL+  GD N+  +  D  NP   + +A FT
Sbjct: 177 RGLVRLEYRQRWDEAFRKF---LKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 233

Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E +   + LQ +  TD+ R  +    + Y+FW Y  ++ SKN G R+D+ +LS     
Sbjct: 234 PQERQGFGELLQAVPLTDSFRHLYPDTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLP 293

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            L  ++I +K  G    SDH P+ + L +
Sbjct: 294 ALCDSKIRSKALG----SDHCPITLYLAL 318


>gi|109082640|ref|XP_001090240.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase isoform 8
           [Macaca mulatta]
 gi|90078218|dbj|BAE88789.1| unnamed protein product [Macaca fascicularis]
          Length = 318

 Score =  173 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 73/269 (27%), Positives = 126/269 (46%), Gaps = 17/269 (6%)

Query: 2   SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN----YH 56
           + + + +WNV+ +RA I      W+KE  PDI+CLQETK  +   P E  +       Y 
Sbjct: 60  ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQYW 119

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                ++ Y+GV +LS++ P+++   +  ++ D + R I A F      + +       G
Sbjct: 120 SAPSDKEGYSGVGLLSRHCPLKVSYGIGEEEHDQEGRVIVAEF---DSFVLVTTYVPNAG 176

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
             +   +Y  +     R      + L   +PL+  GD N+  +  D  NP   + +A FT
Sbjct: 177 RGLVRLEYRQRWDEAFRKF---LKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 233

Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E +   + LQ +   D+ R  +    + Y+FW Y  ++ SKN G R+D+ +LS     
Sbjct: 234 PQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLP 293

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            L  ++I +K  G    SDH P+ + L +
Sbjct: 294 ALCDSKIRSKALG----SDHCPITLYLAL 318


>gi|315497172|ref|YP_004085976.1| exodeoxyribonuclease iii xth [Asticcacaulis excentricus CB 48]
 gi|315415184|gb|ADU11825.1| exodeoxyribonuclease III Xth [Asticcacaulis excentricus CB 48]
          Length = 266

 Score =  173 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 74/272 (27%), Positives = 124/272 (45%), Gaps = 18/272 (6%)

Query: 4   VT--VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETC 60
           +   +A+WN+NS+R RI  +  ++    PDI+CLQE K ++  FP +  +   Y HI   
Sbjct: 1   MRLSIASWNINSVRLRIDQVIRFLDMARPDILCLQEIKCQNGEFPRKAFEDAGYPHILVT 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           GQK ++GVA++SK            + L    R       I    + + N Y+P G  + 
Sbjct: 61  GQKGWHGVALVSKLPFE------INEILPFCRRGEARVQGIQVAGIDLWNFYIPAGGDVP 114

Query: 121 STKYDDKISWIKRFLRFASQRL---ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
             + +DK      F    +  L     + PL+ AGD NI P  +D ++          T 
Sbjct: 115 DRQANDKFDHKLEFYERLTAHLKTRNPDAPLLIAGDLNIAPGENDVWSHRQMLKVVSHTP 174

Query: 178 EVRQSFQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATS 234
              ++F  L               +   L+++W Y A  + K N+G+R+DH++++P   +
Sbjct: 175 PELEAFADLMAAGGFHDAFRELWPEPQKLFTWWSYRAADFRKSNRGLRLDHLLINPALKA 234

Query: 235 LLHS---ARIDTKPRGWTKPSDHTPVIVSLDI 263
            + S   A I    R W +PSDH P+ +  D+
Sbjct: 235 RITSPIAAVIHDSVREWDRPSDHAPIQIEFDL 266


>gi|178743|gb|AAA58371.1| apurinic endonuclease [Homo sapiens]
          Length = 318

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 72/269 (26%), Positives = 123/269 (45%), Gaps = 17/269 (6%)

Query: 2   SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN----YH 56
           + + + +WNV+ +RA I      W+KE  PDI+CLQETK  +   P E  +       Y 
Sbjct: 60  ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQYW 119

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                ++ Y+GV +LS+  P+++   +  ++ D + R I A F      + +       G
Sbjct: 120 SAPSDKEGYSGVGLLSRQCPLKVSYGIGDEEHDQEGRVIVAEF---DSFVLVTAYVPNAG 176

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
             +   +Y  +     R      + L   +PL+  GD N+  +  D  NP   + +A FT
Sbjct: 177 RGLVRLEYRQRWDEAFRKF---LKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 233

Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E +   + LQ +   D+ R  +    + Y+FW Y  ++ SKN G R+D+ +LS     
Sbjct: 234 PQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLP 293

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            L  ++I    R     SDH P+ + L +
Sbjct: 294 ALCDSKI----RSKALASDHCPITLYLAL 318


>gi|269468349|gb|EEZ80020.1| exonuclease III [uncultured SUP05 cluster bacterium]
          Length = 255

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 58/262 (22%), Positives = 105/262 (40%), Gaps = 12/262 (4%)

Query: 5   TVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETL-QSLNYHIETCGQ 62
            + T NVN IRA        W+K  N D++C+QE K ++     +   + ++ + +   +
Sbjct: 3   RIITANVNGIRAAERKGFFDWMKTQNADVVCVQEIKAQEDQLDDKFYPKGIHTYYKPAER 62

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G  +  K +P  ++     D              ++  ++ I +            
Sbjct: 63  KGYSGTGLYCKDKPDRVIFSPWEDIDFEGRFIQADFRNLSVISIYIPSGSSKQERQDYKM 122

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
            +      I+RF+ +  +  E     I  GD NI+ +  D  N    +N +    E R  
Sbjct: 123 NF-----MIERFMPYLKKLQEDGRQYIVCGDINIVHKEIDIKNFASNKNHSGCLPEERAW 177

Query: 183 FQK-LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
            ++      F DA R  +   H Y++W     +W+ N G RID+ +LS           I
Sbjct: 178 MEQLFTEAKFIDAFREVNQEKHQYTWWSNRGQAWANNTGWRIDYQILSANLKDTPQRVEI 237

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
               R     SDH+P+I+  ++
Sbjct: 238 YKNER----FSDHSPLIIDYNL 255


>gi|328947089|ref|YP_004364426.1| exodeoxyribonuclease III Xth [Treponema succinifaciens DSM 2489]
 gi|328447413|gb|AEB13129.1| exodeoxyribonuclease III Xth [Treponema succinifaciens DSM 2489]
          Length = 251

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 68/261 (26%), Positives = 114/261 (43%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +  N        + D  CLQETK +      E L   +       +
Sbjct: 1   MKFISWNVNGLRAVMGKNFMEAFGSLDADFFCLQETKLQAGQIQME-LPDYHQFWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G A+ +K++PI     +   + D + R I   +       +   + +   N     
Sbjct: 60  KGYSGTAVFTKHEPISASYGIGIAEHDTEGRVITLEYE------KFFLVTVYTPNSQDEL 113

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +  +     +   R   + L L++ +I  GD N+  +  D  NP     +A FT E R  
Sbjct: 114 RRLEYRMKWEDDFRAYLKTLALKKGVIVCGDMNVAHEEIDIKNPKTNRRNAGFTDEERGK 173

Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             +L + GFTD+ R  +     +YS+W Y   +  KN G RID+ ++S      +  A+I
Sbjct: 174 MTELLSSGFTDSFRHFYPDTAGVYSWWSYRFHAREKNTGWRIDYFLVSDSIKDKMTGAKI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            T+  G    SDH PV + ++
Sbjct: 234 HTEILG----SDHCPVELDME 250


>gi|260881707|ref|ZP_05405068.2| exodeoxyribonuclease III [Mitsuokella multacida DSM 20544]
 gi|260848221|gb|EEX68228.1| exodeoxyribonuclease III [Mitsuokella multacida DSM 20544]
          Length = 253

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 65/262 (24%), Positives = 113/262 (43%), Gaps = 13/262 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +         + + D+  LQETK + +    + L     +  +  +
Sbjct: 3   MKCISWNVNGLRACLKKGFMESFVKLDADVFALQETKMQPEQAILD-LPGYRQYWNSAER 61

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G A+ S+ +P+ +   L  ++ D + R I   F      + +       G    + 
Sbjct: 62  KGYSGTAVFSRIEPLAVTYGLGIEEHDHEGRVITLEFPDC-YFVTVYTPNSKRGLERLAY 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           + +      +   R     L+ ++P+I  GD N+     D  NP    ++A FT E R  
Sbjct: 121 RME-----WEDAFRAYLVALDAKKPVIVCGDLNVAHTEIDLKNPKTNHHNAGFTDEERGK 175

Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L + GF D  RA +     +Y++W Y   +   N G RID+ + S      +  A I
Sbjct: 176 FTELLDAGFIDTFRALYPDRTGIYTWWSYLRKARDTNAGWRIDYFVTSARLREKIADATI 235

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
             +  G    SDH PV + L +
Sbjct: 236 HNEVFG----SDHCPVGLELRL 253


>gi|325265848|ref|ZP_08132534.1| exodeoxyribonuclease III [Kingella denitrificans ATCC 33394]
 gi|324982486|gb|EGC18112.1| exodeoxyribonuclease III [Kingella denitrificans ATCC 33394]
          Length = 257

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 60/262 (22%), Positives = 111/262 (42%), Gaps = 13/262 (4%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETC 60
           + + + NVN IR+        ++ ++  DI+C+QE K ++ +   +       H      
Sbjct: 1   MRIISANVNGIRSAYKKGFLDYMAQSGADIVCVQELKAQEADLADDMKNPHGMHGVWHCA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            ++ Y+GVAI SK  P  +   L  +  D + RF+ A F   +                 
Sbjct: 61  QKRGYSGVAIYSKRTPDAVHIGLGLEQFDQEGRFVRADFGNLSVI-----SLYLPSGTSA 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   K  ++  F    ++       ++  GD+NI  Q  D  N    + ++ F  E R
Sbjct: 116 EERQAYKYKFLDAFYPILAELKASGRDVVVCGDWNIAHQNIDIKNWKGNQKNSGFLPEER 175

Query: 181 QSFQKLQ-NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
               K+   +G+ DA R  +     Y++W     +++K+ G RID+ M++P+    + SA
Sbjct: 176 AWIGKVIGELGWVDAWRTLYPEVAGYTWWSNRGQAYAKDVGWRIDYQMVTPQLAQAMQSA 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261
            +        K SDH P++V  
Sbjct: 236 HVYKDV----KFSDHAPLVVDY 253


>gi|149203971|ref|ZP_01880939.1| exodeoxyribonuclease III [Roseovarius sp. TM1035]
 gi|149142413|gb|EDM30458.1| exodeoxyribonuclease III [Roseovarius sp. TM1035]
          Length = 262

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 89/268 (33%), Positives = 120/268 (44%), Gaps = 11/268 (4%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIET 59
           MS  T+ATWN+NS+R R   +A  ++E  PDI+CLQE K+     P E   +L Y H+  
Sbjct: 1   MS-FTLATWNINSVRLREGLVARLMQEEGPDILCLQECKSPVDKMPLEGFAALGYAHVVA 59

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            GQK YNGVAILSK    E+     G                    + I N Y+P G  +
Sbjct: 60  RGQKGYNGVAILSKLPIEEV-----GAMDFADLGHARHIAGRLENGVVIHNFYVPAGGDV 114

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL 177
                +DK      +L           P      GD NI P+  D +N          T 
Sbjct: 115 PDRAVNDKFGQKLDYLTGMRDWFHDSRPEKAILVGDLNIAPREDDVWNHKQLLKIVSHTP 174

Query: 178 -EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSL 235
            EV      +   G+ D  RA      LYS+W Y A  W   +KG R+DH+  + +  + 
Sbjct: 175 VEVDHLSAVMAAGGWQDVTRADIPEGQLYSWWSYRAADWDAADKGRRLDHVWATGDIATS 234

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            HS+RI    RGW +PSDH PV  + D+
Sbjct: 235 AHSSRILRGARGWEQPSDHAPVFATFDL 262


>gi|297182400|gb|ADI18565.1| exonuclease IIi [uncultured gamma proteobacterium HF4000_23L14]
          Length = 254

 Score =  173 bits (438), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 57/263 (21%), Positives = 106/263 (40%), Gaps = 12/263 (4%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ-SLNYHIETCG 61
           + + T NVN IRA        W+++ N D++CLQE K ++           ++ +  +  
Sbjct: 1   MRIITINVNGIRAAERKGFFIWLEKQNADVVCLQEIKAQEHQLDERFYPSGMHTYYHSAE 60

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G A+  K +P +++     D              ++  ++ + +           
Sbjct: 61  RKGYSGTALYCKSKPDQVIYSPWQDINSEGRLIQADFGNLSVASIYLPSGSSKEERQAFK 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            ++        R L             I+ GD+NI  +  D  N    + ++ F  E R 
Sbjct: 121 MEF-----ISDRLLPHLHALQNDGRQYIYCGDWNIAHKKIDLKNWQSNQKNSGFLPEERA 175

Query: 182 SFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
              KL    G+ DA R  +     Y++W     +W  N G R+D+ ++S     L  +  
Sbjct: 176 WLDKLYEEVGYIDAFREINQDEFQYTWWSNRGQAWLHNTGWRLDYQVVSSNLAGLATACE 235

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263
           I  K R     SDH+P+I+  ++
Sbjct: 236 IYKKER----FSDHSPLIMDYNL 254


>gi|296161384|ref|ZP_06844191.1| exodeoxyribonuclease III Xth [Burkholderia sp. Ch1-1]
 gi|295888370|gb|EFG68181.1| exodeoxyribonuclease III Xth [Burkholderia sp. Ch1-1]
          Length = 259

 Score =  173 bits (438), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 63/264 (23%), Positives = 112/264 (42%), Gaps = 14/264 (5%)

Query: 3   VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59
           ++ V T N+N IR A       W  E   D++C+QE K    +   E +   N+  + + 
Sbjct: 1   MLRVITANLNGIRSAAKKGFFDWFGEQKADVLCVQEIKCSQDDMTPEFMAPHNFTGYFQH 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G  + ++++P E+V     ++ D + R++E  F      L + ++Y+P G+  
Sbjct: 61  AVKKGYSGAGVYTRHEPDEVVIGFGSEEFDPEGRYVELRFG----KLSVISVYVPSGSSG 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +                  L  E  +I  GD NI+ +  D  N    + ++    E 
Sbjct: 117 DERQQA--KYRFMDEFMPHLAELAQEREVIVCGDVNIVHKEIDIKNWKSNQKNSGCLPEE 174

Query: 180 RQSFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R    KL +  G+ D  R        Y++W     +++KN G RID+ + +P+  S    
Sbjct: 175 RAWLTKLFDEVGYVDVFRTLDQRPEQYTWWSNRGQAYAKNVGWRIDYQIATPDIASKAKR 234

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
             +        K SDH P+ V  D
Sbjct: 235 TDVFRDI----KFSDHAPLTVDYD 254


>gi|158421717|ref|YP_001523009.1| exodeoxyribonuclease III protein [Azorhizobium caulinodans ORS 571]
 gi|158328606|dbj|BAF86091.1| exodeoxyribonuclease III protein [Azorhizobium caulinodans ORS 571]
          Length = 290

 Score =  173 bits (438), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 68/272 (25%), Positives = 110/272 (40%), Gaps = 12/272 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62
           +TV TWN+NS+R R+  +   ++   PD++CLQETK +D  FP   ++ L + HI   GQ
Sbjct: 19  LTVCTWNINSVRIRLDIVKETVERLKPDVLCLQETKCQDDKFPLAAIRELGFPHIALNGQ 78

Query: 63  KSYNGVAILSKYQPIEIVTH-LPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           K ++GVA  SK     I      G                 +  + I N Y+P G    +
Sbjct: 79  KGWHGVATFSKRPFDAIEKQEFCGKGDARHIAVTLGGAGGLSAPVTIHNFYIPAGGDEPN 138

Query: 122 TKYDDKISWI-------KRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
            + + K +           + +            I  GD NI P   D +N     +   
Sbjct: 139 PEVNPKFAHKLAFLDEAIAWEKLTEAGRPAGAHAILVGDLNIAPLETDVWNHKQLLSVVS 198

Query: 175 FTLEVRQSFQKLQNM--GFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPE 231
            T        + Q               T  L+++W Y +   +  ++G R+DH+  S  
Sbjct: 199 HTPVEVDLLTRFQAAGPWIDVMREFVPPTEKLFTWWSYRSPDHTVNDRGRRLDHVWTSRS 258

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                 +  +  + R W KPSDH PV V+ ++
Sbjct: 259 LAGKAKAMTVLKEARSWEKPSDHVPVAVTFEV 290


>gi|330999011|ref|ZP_08322736.1| exodeoxyribonuclease III [Parasutterella excrementihominis YIT
           11859]
 gi|329575753|gb|EGG57279.1| exodeoxyribonuclease III [Parasutterella excrementihominis YIT
           11859]
          Length = 295

 Score =  173 bits (438), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 62/263 (23%), Positives = 105/263 (39%), Gaps = 12/263 (4%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFET-LQSLNY-HIET 59
           V+ + T N N IR+ +      W+ + + DI+C+QE K +    P E  L    Y ++  
Sbjct: 38  VLKIITINTNGIRSAVNKGFHLWLAKQDADIVCIQELKAQPDEVPDEINLDGTFYRYVHC 97

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G AIL++ +P E++     ++ D + R++EA F        I           
Sbjct: 98  AEKKGYSGCAILTRKKPDEVIIGFGNEEFDREGRYVEARFNN-----LIVVSIYFPSGSS 152

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
           +  +   K  ++        + L     ++  GD+NI  +  D  N      ++ F  E 
Sbjct: 153 SEERQQAKFRFLDVIKGRLDELLRDGRDVVLCGDFNIAHKEIDIKNWKGNLKNSGFLPEE 212

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           RQ        G+ D  R        +++W     +   N G RID+   +P   S     
Sbjct: 213 RQWITDRLREGWQDVFRRLDPRPDRFTWWSNRGRARINNVGWRIDYQFSTPAIASTAKET 272

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
            I    R     SDH P+ V  D
Sbjct: 273 DIYRDER----FSDHAPLTVVYD 291


>gi|154707400|ref|YP_001425116.1| exodeoxyribonuclease III [Coxiella burnetii Dugway 5J108-111]
 gi|154356686|gb|ABS78148.1| exodeoxyribonuclease III [Coxiella burnetii Dugway 5J108-111]
          Length = 259

 Score =  173 bits (438), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 63/263 (23%), Positives = 109/263 (41%), Gaps = 13/263 (4%)

Query: 4   VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + T N+N IRA        W+K    DI+CLQETK   +    +      YH      
Sbjct: 1   MRIITLNLNGIRAAARRWFFDWLKRQKADIVCLQETKACLEITNGDQFHPKGYHCYYHDA 60

Query: 63  KS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           +   Y+GV I  + +P  + T L  +  D + R+I+A F   +                 
Sbjct: 61  EKSGYSGVGIYCREKPDRVTTRLGWEHADKEGRYIQADFGSLSV-----ASLYMPSGTTG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   K  ++ R+++     +  +   I  GD+NI+ +  D  N    +  +    E R
Sbjct: 116 EHRQKIKFDFMDRYMKRLKNIVHSKRSFIICGDWNIVHKEIDIKNFKSNQKHSGCLPEER 175

Query: 181 QS-FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
               +    +G  DA R  +     Y++W     +W KN G RID+ +++ +  + + S 
Sbjct: 176 AWLDEVFTKVGLVDAFRVVNQKPDQYTWWSSRGRAWEKNVGWRIDYQVITSDLKNSVKSE 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
           RI    R     SDH P+I+  +
Sbjct: 236 RIYKDKR----FSDHAPLIIDYE 254


>gi|86153870|ref|ZP_01072073.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|85842831|gb|EAQ60043.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni
           HB93-13]
          Length = 252

 Score =  173 bits (438), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 61/262 (23%), Positives = 96/262 (36%), Gaps = 12/262 (4%)

Query: 4   VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA    N   WI +   D I  QE K  +  FP +  +     +     
Sbjct: 1   MKLLSWNVNGLRAICDKNALDWIAQEKIDFIGFQEIKAHEDKFPKKIYEYPFKQMYFNSA 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K      ++S       V      D +           I    +   N            
Sbjct: 61  KRAGYSGVMSLCNFDSEVKKCEFFDDEEGRVLEHRFKNIALFNIYFPN------GQKDEE 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           + + K+ +   FL +  + L+    +I  GD N   +  D  +P    N + F    R  
Sbjct: 115 RLNFKMKFYADFLVYLDKLLKDGFEIIICGDVNTAHKEIDLTHPKANANTSGFLPIERAW 174

Query: 183 FQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
              L  +GF D  R  + +    YS+W Y   +  +N G RID+  +S      L +A I
Sbjct: 175 IDDLLKLGFIDTFREINGEIKEKYSWWSYRMKARERNVGWRIDYFFISKGLKDKLKNAFI 234

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
                G    SDH PV + +DI
Sbjct: 235 RDDIFG----SDHAPVGIEIDI 252


>gi|294788545|ref|ZP_06753787.1| exodeoxyribonuclease III [Simonsiella muelleri ATCC 29453]
 gi|294483422|gb|EFG31107.1| exodeoxyribonuclease III [Simonsiella muelleri ATCC 29453]
          Length = 259

 Score =  173 bits (438), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 66/263 (25%), Positives = 119/263 (45%), Gaps = 13/263 (4%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETC 60
           + + + NVN IR+       A+I ++  DI+C+QE K ++ +   +  +    H      
Sbjct: 1   MRIISANVNGIRSAYKKGFLAYIAQSGADIVCVQELKAQESDLSDDMQRPHGMHGVWHCA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            ++ Y+GVAI SK +P  +   L  +  D + RF+ A F      L + +LYLP G    
Sbjct: 61  QKRGYSGVAIYSKQKPDHVQIGLGIEKFDNEGRFVRADFG----HLSVISLYLPSGTSAE 116

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
                 K  ++  F    ++       ++  GD+NI  Q  D  N      ++ F  E R
Sbjct: 117 ER-QAYKYEFLDAFYPLLAELKASGRDVVVCGDWNIAHQNIDIKNWKGNLKNSGFLPEER 175

Query: 181 QSF-QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           +     +  +G+ D  R  +     Y++W     +++ + G RID+ M++P   +  H+A
Sbjct: 176 EWIGHVITKLGWVDIWRTLYPDVAGYTWWSNRGQAYANDVGWRIDYQMVTPNLATKAHTA 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
            +  +     K SDH P++V  D
Sbjct: 236 HVYKEV----KFSDHAPLVVDYD 254


>gi|118138505|pdb|2ISI|A Chain A, Crystal Structure Of Ape1 From Homo Sapiens In A New
           Crystal Form Complexed With A Ligand
 gi|118138506|pdb|2ISI|B Chain B, Crystal Structure Of Ape1 From Homo Sapiens In A New
           Crystal Form Complexed With A Ligand
 gi|118138507|pdb|2ISI|C Chain C, Crystal Structure Of Ape1 From Homo Sapiens In A New
           Crystal Form Complexed With A Ligand
          Length = 317

 Score =  173 bits (438), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 73/269 (27%), Positives = 125/269 (46%), Gaps = 17/269 (6%)

Query: 2   SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN----YH 56
           + + + +WNV+ +RA I      W+KE  PDI+CLQETK  +   P E  +       Y 
Sbjct: 59  ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQYW 118

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                ++ Y+GV +LS+  P+++   +  ++ D + R I A F      + +       G
Sbjct: 119 SAPSDKEGYSGVGLLSRQCPLKVSYGIGDEEHDQEGRVIVAEF---DSFVLVTAYVPNAG 175

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
             +   +Y  +     R      + L   +PL+  GD N+  +  D  NP   + +A FT
Sbjct: 176 RGLVRLEYRQRWDEAFRKF---LKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 232

Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E +   + LQ +   D+ R  +    + Y+FW Y  ++ SKN G R+D+ +LS     
Sbjct: 233 PQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLP 292

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            L  ++I +K  G    SDH P+ + L +
Sbjct: 293 ALCDSKIRSKALG----SDHCPITLYLAL 317


>gi|60652565|gb|AAX28977.1| APEX nuclease 1 [synthetic construct]
          Length = 319

 Score =  173 bits (438), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 73/269 (27%), Positives = 125/269 (46%), Gaps = 17/269 (6%)

Query: 2   SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN----YH 56
           + + + +WNV+ +RA I      W+KE  PDI+CLQETK  +   P E  +       Y 
Sbjct: 60  ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQYW 119

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                ++ Y+GV +LS+  P+++   +  ++ D + R I A F      + +       G
Sbjct: 120 SAPSDKEGYSGVGLLSRQCPLKVSYGIGDEEHDQEGRVIVAEF---DSFVLVTAYVPNAG 176

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
             +   +Y  +     R      + L   +PL+  GD N+  +  D  NP   + +A FT
Sbjct: 177 RGLVRLEYRQRWDEAFRKF---LKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 233

Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E +   + LQ +   D+ R  +    + Y+FW Y  ++ SKN G R+D+ +LS     
Sbjct: 234 PQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLP 293

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            L  ++I +K  G    SDH P+ + L +
Sbjct: 294 ALCDSKIRSKALG----SDHCPITLYLAL 318


>gi|299037|gb|AAB26054.1| APEX nuclease=major apurinic/apyrimidinic endonuclease [human,
           Peptide, 317 aa]
          Length = 317

 Score =  173 bits (438), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 73/269 (27%), Positives = 125/269 (46%), Gaps = 17/269 (6%)

Query: 2   SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN----YH 56
           + + + +WNV+ +RA I      W+KE  PDI+CLQETK  +   P E  +       Y 
Sbjct: 59  ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQYW 118

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                ++ Y+GV +LS+  P+++   +  ++ D + R I A F      + +       G
Sbjct: 119 SAPSDKEGYSGVGLLSRQCPLKVSYGIGDEEHDQEGRVIVAEF---DSFVLVTAYVPNAG 175

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
             +   +Y  +     R      + L   +PL+  GD N+  +  D  NP   + +A FT
Sbjct: 176 RGLVRLEYRQRWDEAFRKF---LKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 232

Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E +   + LQ +   D+ R  +    + Y+FW Y  ++ SKN G R+D+ +LS     
Sbjct: 233 PQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLP 292

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            L  ++I +K  G    SDH P+ + L +
Sbjct: 293 ALCDSKIRSKALG----SDHCPITLYLAL 317


>gi|157830335|pdb|1BIX|A Chain A, The Crystal Structure Of The Human Dna Repair Endonuclease
           Hap1 Suggests The Recognition Of Extra-Helical
           Deoxyribose At Dna Abasic Sites
          Length = 287

 Score =  173 bits (438), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 73/269 (27%), Positives = 125/269 (46%), Gaps = 17/269 (6%)

Query: 2   SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN----YH 56
           + + + +WNV+ +RA I      W+KE  PDI+CLQETK  +   P E  +       Y 
Sbjct: 29  ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQYW 88

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                ++ Y+GV +LS+  P+++   +  ++ D + R I A F      + +       G
Sbjct: 89  SAPSDKEGYSGVGLLSRQCPLKVSYGIGDEEHDQEGRVIVAEF---DSFVLVTAYVPNAG 145

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
             +   +Y  +     R      + L   +PL+  GD N+  +  D  NP   + +A FT
Sbjct: 146 RGLVRLEYRQRWDEAFRKF---LKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 202

Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E +   + LQ +   D+ R  +    + Y+FW Y  ++ SKN G R+D+ +LS     
Sbjct: 203 PQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLP 262

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            L  ++I +K  G    SDH P+ + L +
Sbjct: 263 ALCDSKIRSKALG----SDHCPITLYLAL 287


>gi|219478|dbj|BAA14381.1| apurinic/apyrimidinic endonuclease [Homo sapiens]
          Length = 318

 Score =  173 bits (438), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 73/269 (27%), Positives = 125/269 (46%), Gaps = 17/269 (6%)

Query: 2   SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN----YH 56
           + + + +WNV+ +RA I      W+KE  PDI+CLQETK  +   P E  +       Y 
Sbjct: 60  ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQYW 119

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                ++ Y+GV +LS+  P+++   +  ++ D + R I A F      + +       G
Sbjct: 120 SAPSDKEGYSGVGLLSRQCPLKVSYGIGDEEHDQEGRVIVAEF---DSFVLVTAYVPNAG 176

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
             +   +Y  +     R      + L   +PL+  GD N+  +  D  NP   + +A FT
Sbjct: 177 RGLVRLEYRQRWDEAFRKF---LKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 233

Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E +   + LQ +   D+ R  +    + Y+FW Y  ++ SKN G R+D+ +LS     
Sbjct: 234 PQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLP 293

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            L  ++I +K  G    SDH P+ + L +
Sbjct: 294 ALCDSKIRSKALG----SDHCPITLYLAL 318


>gi|18375501|ref|NP_001632.2| DNA-(apurinic or apyrimidinic site) lyase [Homo sapiens]
 gi|18375503|ref|NP_542379.1| DNA-(apurinic or apyrimidinic site) lyase [Homo sapiens]
 gi|18375505|ref|NP_542380.1| DNA-(apurinic or apyrimidinic site) lyase [Homo sapiens]
 gi|113984|sp|P27695|APEX1_HUMAN RecName: Full=DNA-(apurinic or apyrimidinic site) lyase; AltName:
           Full=APEX nuclease; Short=APEN; AltName:
           Full=Apurinic-apyrimidinic endonuclease 1; Short=AP
           endonuclease 1; Short=APE-1; AltName: Full=REF-1;
           AltName: Full=Redox factor-1; Contains: RecName:
           Full=DNA-(apurinic or apyrimidinic site) lyase,
           mitochondrial
 gi|13399540|pdb|1E9N|A Chain A, A Second Divalent Metal Ion In The Active Site Of A New
           Crystal Form Of Human ApurinicAPYRIMIDINIC ENDONUCLEASE,
           Ape1, And Its Implications For The Catalytic Mechanism
 gi|13399541|pdb|1E9N|B Chain B, A Second Divalent Metal Ion In The Active Site Of A New
           Crystal Form Of Human ApurinicAPYRIMIDINIC ENDONUCLEASE,
           Ape1, And Its Implications For The Catalytic Mechanism
 gi|13399606|pdb|1HD7|A Chain A, A Second Divalent Metal Ion In The Active Site Of A New
           Crystal Form Of Human ApurinicAPYRIDINIMIC ENDONUCLEASE,
           Ape1, And Its Implications For The Catalytic Mechanism
 gi|19339022|gb|AAL86909.1|AF488551_1 APEX nuclease (multifunctional DNA repair enzyme) [Homo sapiens]
 gi|32022|emb|CAA46925.1| AP endonuclease 1 [Homo sapiens]
 gi|178747|gb|AAA58372.1| apurinic/apyrimidinic endonuclease [Homo sapiens]
 gi|183780|gb|AAA58629.1| apurinic/apyrimidinic endonuclease [Homo sapiens]
 gi|254069|gb|AAB22977.1| Ref-1 [Homo sapiens]
 gi|13436404|gb|AAH04979.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Homo sapiens]
 gi|28071072|emb|CAD61917.1| unnamed protein product [Homo sapiens]
 gi|54697126|gb|AAV38935.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Homo sapiens]
 gi|60655677|gb|AAX32402.1| APEX nuclease 1 [synthetic construct]
 gi|61358645|gb|AAX41600.1| APEX nuclease 1 [synthetic construct]
 gi|63100763|gb|AAH95428.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Homo sapiens]
 gi|119586867|gb|EAW66463.1| APEX nuclease (multifunctional DNA repair enzyme) 1, isoform CRA_a
           [Homo sapiens]
 gi|119586868|gb|EAW66464.1| APEX nuclease (multifunctional DNA repair enzyme) 1, isoform CRA_a
           [Homo sapiens]
 gi|119586869|gb|EAW66465.1| APEX nuclease (multifunctional DNA repair enzyme) 1, isoform CRA_a
           [Homo sapiens]
 gi|119586870|gb|EAW66466.1| APEX nuclease (multifunctional DNA repair enzyme) 1, isoform CRA_a
           [Homo sapiens]
 gi|119586871|gb|EAW66467.1| APEX nuclease (multifunctional DNA repair enzyme) 1, isoform CRA_a
           [Homo sapiens]
 gi|119586872|gb|EAW66468.1| APEX nuclease (multifunctional DNA repair enzyme) 1, isoform CRA_a
           [Homo sapiens]
 gi|158255636|dbj|BAF83789.1| unnamed protein product [Homo sapiens]
          Length = 318

 Score =  173 bits (438), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 73/269 (27%), Positives = 125/269 (46%), Gaps = 17/269 (6%)

Query: 2   SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN----YH 56
           + + + +WNV+ +RA I      W+KE  PDI+CLQETK  +   P E  +       Y 
Sbjct: 60  ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQYW 119

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                ++ Y+GV +LS+  P+++   +  ++ D + R I A F      + +       G
Sbjct: 120 SAPSDKEGYSGVGLLSRQCPLKVSYGIGDEEHDQEGRVIVAEF---DSFVLVTAYVPNAG 176

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
             +   +Y  +     R      + L   +PL+  GD N+  +  D  NP   + +A FT
Sbjct: 177 RGLVRLEYRQRWDEAFRKF---LKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 233

Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E +   + LQ +   D+ R  +    + Y+FW Y  ++ SKN G R+D+ +LS     
Sbjct: 234 PQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLP 293

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            L  ++I +K  G    SDH P+ + L +
Sbjct: 294 ALCDSKIRSKALG----SDHCPITLYLAL 318


>gi|91781453|ref|YP_556659.1| exodeoxyribonucleaseiii xth [Burkholderia xenovorans LB400]
 gi|91685407|gb|ABE28607.1| ExodeoxyribonucleaseIII xth [Burkholderia xenovorans LB400]
          Length = 259

 Score =  173 bits (438), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 62/264 (23%), Positives = 111/264 (42%), Gaps = 14/264 (5%)

Query: 3   VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59
           ++ V T N+N IR A       W  E   D++C+QE K    +   E +   ++  + + 
Sbjct: 1   MLRVITANLNGIRSAAKKGFFDWFGEQKADVLCVQEIKCSQDDMTPEFMAPHDFTGYFQH 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G  + ++++P E+V     ++ D + R++E  F      L + ++Y+P G+  
Sbjct: 61  AVKKGYSGAGVYTRHEPDEVVIGFGSEEFDPEGRYVELRFG----KLSVISVYVPSGSSG 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +                  L  E  +I  GD NI+ +  D  N    + ++    E 
Sbjct: 117 DERQQA--KYRFMDEFMPHLAELAQEREVIVCGDVNIVHKEIDIKNWKSNQKNSGCLPEE 174

Query: 180 RQSFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R    KL +  G+ D  R        Y++W     +++KN G RID+ + +P   S    
Sbjct: 175 RAWLTKLFDEVGYVDVFRTLDQRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGIASKAKR 234

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
             +        K SDH P+ V  D
Sbjct: 235 TDVFRDI----KFSDHAPLTVDYD 254


>gi|259649286|dbj|BAI41448.1| exodeoxyribonuclease III [Lactobacillus rhamnosus GG]
          Length = 253

 Score =  173 bits (437), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 67/258 (25%), Positives = 109/258 (42%), Gaps = 12/258 (4%)

Query: 3   VVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++ + +WNVN +RA +         E + D  CLQETK +      + L     +     
Sbjct: 1   MLKMISWNVNGLRAVLKKDFMTIFNELDADWFCLQETKMQAGQVELD-LPGYYQYFNYAE 59

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G AI +K++P+ +   +   + D + R I   +T                  +  
Sbjct: 60  RKGYSGTAIFTKHKPLNVTYGMGIPEHDTEGRIITLEYTKFYLMTVYTPNSGGELKRLDY 119

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            +         R     +  L  ++PL++ GD N+  +P D  N     ++A FT E R 
Sbjct: 120 RQQ------WDRDFLAYTNELAAKKPLVYCGDLNVAHEPIDLKNDKTNHHNAGFTDEERA 173

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
            F K  N GF D  R  +     YS+W Y   + + N G RID+ + S      +  A+I
Sbjct: 174 DFTKQLNSGFIDTFRHFYPDTVTYSWWSYRFHARANNAGWRIDYFVASSAFQPYIQDAKI 233

Query: 242 DTKPRGWTKPSDHTPVIV 259
            T+  G    SDH PV +
Sbjct: 234 LTQIMG----SDHCPVEL 247


>gi|209522354|ref|ZP_03270972.1| exodeoxyribonuclease III Xth [Burkholderia sp. H160]
 gi|209497213|gb|EDZ97450.1| exodeoxyribonuclease III Xth [Burkholderia sp. H160]
          Length = 260

 Score =  173 bits (437), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 62/264 (23%), Positives = 111/264 (42%), Gaps = 14/264 (5%)

Query: 3   VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59
           ++ V T N+N IR A       W  E   D++C+QE K    +   E +   ++  + + 
Sbjct: 1   MLRVITANLNGIRSAAKKGFFDWFGEQGADVLCVQEIKCSQDDMTPEFMAPHDFTGYFQH 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G  + ++++P E+V     ++ D + R++E  F      L + ++Y+P G+  
Sbjct: 61  AVKKGYSGAGVYTRHEPDEVVIGFGSEEFDPEGRYVELRFG----KLSVISVYVPSGSSG 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +                  L  E  +I  GD NI+ +  D  N    + ++    E 
Sbjct: 117 DDRQQA--KFRFMDEFMPHLAELATEREVIVCGDVNIVHKEIDIKNWKGNQKNSGCLPEE 174

Query: 180 RQSFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R    KL +  G+ D  R        Y++W     +++KN G RID+ + +P   S    
Sbjct: 175 RAWLDKLFDEVGYVDVFRTLDPRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGIASKAKR 234

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
             +        K SDH P+ V  D
Sbjct: 235 TDVFRDI----KFSDHAPLTVDYD 254


>gi|241762159|ref|ZP_04760242.1| exodeoxyribonuclease III Xth [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|260753749|ref|YP_003226642.1| exodeoxyribonuclease III Xth [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
 gi|283856531|ref|YP_163434.2| exodeoxyribonuclease III Xth [Zymomonas mobilis subsp. mobilis ZM4]
 gi|241373409|gb|EER63009.1| exodeoxyribonuclease III Xth [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|258553112|gb|ACV76058.1| exodeoxyribonuclease III Xth [Zymomonas mobilis subsp. mobilis
           NCIMB 11163]
 gi|283775536|gb|AAV90323.2| exodeoxyribonuclease III Xth [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 264

 Score =  173 bits (437), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 82/263 (31%), Positives = 123/263 (46%), Gaps = 8/263 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62
           + + +WN+NS+RAR+ ++  ++KE  PDI+CLQETK  +  FP      L Y H    GQ
Sbjct: 1   MRIVSWNINSVRARLAHVERFLKEEQPDILCLQETKATNGVFPSRFFYDLGYIHQAVHGQ 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
             YNGVAILS+               + +AR I  T       +R+ N+Y+P G  I   
Sbjct: 61  PGYNGVAILSRIAFSPAEITSHDWQNNQEARHIGITLE---NGVRLENVYIPAGGDIPDR 117

Query: 123 KYDDKISWIKRFL-RFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180
             + K      F+ R       LE+P I  GD+NI P   D ++          T  EV 
Sbjct: 118 DLNPKFGQKLDFISRMIEWSSHLEQPTILVGDFNIAPLESDVWSHKQLLKVVSHTPIEVD 177

Query: 181 QSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLLHS 238
              +   +  + D  R  +     LY++W Y +  W+K ++G R+DH+  SP     L  
Sbjct: 178 HLSRLQASHNWIDLGRHFYPAPERLYTWWSYRSKDWTKSDRGRRLDHMWASPSLVDHLVG 237

Query: 239 ARIDTKPRGWTKPSDHTPVIVSL 261
            ++    R W KPSDH P++   
Sbjct: 238 HKVYESCRSWIKPSDHVPLLTEF 260


>gi|32024|emb|CAA42437.1| HAP1 [Homo sapiens]
          Length = 318

 Score =  173 bits (437), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 73/269 (27%), Positives = 125/269 (46%), Gaps = 17/269 (6%)

Query: 2   SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN----YH 56
           + + + +WNV+ +RA I      W+KE  PDI+CLQETK  +   P E  +       Y 
Sbjct: 60  ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQYW 119

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                ++ Y+GV +LS+  P+++   +  ++ D + R I A F      + +       G
Sbjct: 120 SAPSDKEGYSGVGLLSRQCPLKVSYGIGDEEHDQEGRVIVAEF---DSFVLVTAYVPNAG 176

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
             +   +Y  +     R      + L   +PL+  GD N+  +  D  NP   + +A FT
Sbjct: 177 RGLVRLEYRQRWDEAFRKF---LKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 233

Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E +   + LQ +   D+ R  +    + Y+FW Y  ++ SKN G R+D+ +LS     
Sbjct: 234 PQEAQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLP 293

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            L  ++I +K  G    SDH P+ + L +
Sbjct: 294 ALCDSKIRSKALG----SDHCPITLYLAL 318


>gi|110834346|ref|YP_693205.1| exodeoxyribonuclease III [Alcanivorax borkumensis SK2]
 gi|110647457|emb|CAL16933.1| exodeoxyribonuclease III [Alcanivorax borkumensis SK2]
          Length = 271

 Score =  173 bits (437), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 75/270 (27%), Positives = 126/270 (46%), Gaps = 11/270 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +T+ ++N+N IRAR+H L A I +  P +I LQETK  D +FP + ++ + YH    GQK
Sbjct: 1   MTLISFNINGIRARLHQLQAVIDKYQPALIGLQETKVHDPDFPEQAVRDMGYHPYYFGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-TQTLRIGNLYLPHGNPITST 122
            + GVA++++     +    P DD D Q R I  T   N    + + N Y P G      
Sbjct: 61  GHYGVALITREPLESVQYGFPTDDEDAQRRMIIGTLKHNDGSLITVLNGYFPQGENRDHP 120

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175
            K+  K  + +    +     +  + +   GD+NI                 + E    F
Sbjct: 121 LKFPAKKKFYEDLQHYLITHHQPSDQVAVMGDFNISSTDLDIGIGEPNRKRWLREGKTSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKN--KGIRIDHIMLSPEA 232
             E R+ + +L   G TD  R  +  T  ++S++DY +  + +   +G+RID ++ +   
Sbjct: 181 LPEEREWWDRLVGWGLTDTFRHQNPTTDDVFSWFDYRSKGFDREPRRGLRIDTVLATEPL 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
            + L +  +D + R   KPSDH PV    +
Sbjct: 241 MAKLDTTGVDYQMRAMEKPSDHCPVWARFN 270


>gi|313904223|ref|ZP_07837602.1| exodeoxyribonuclease III Xth [Eubacterium cellulosolvens 6]
 gi|313471025|gb|EFR66348.1| exodeoxyribonuclease III Xth [Eubacterium cellulosolvens 6]
          Length = 250

 Score =  173 bits (437), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 67/261 (25%), Positives = 115/261 (44%), Gaps = 12/261 (4%)

Query: 4   VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +        +E + D  C+QE+K ++    +   +  N +     +
Sbjct: 1   MKFISWNVNGLRACMKKDFDKTFRELDADFFCIQESKLQEGQIEY-CPEGWNEYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K   +++   +  ++ D + R I   +                 +     
Sbjct: 60  KGYSGTAIWAKKPALQVTYGIGEEEHDHEGRVITLEYDTF-----FLVTVYTPNSQDGLK 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           + D +++W     R    +L+ ++P+I  GD N+  +  D  NP     +A FT E R  
Sbjct: 115 RLDYRMTWE-DSFRAYLGKLDEKKPVIVCGDLNVAHEEIDLKNPKTNRKNAGFTDEERGK 173

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F +L + GFTD+ R  H     YS+W Y   +  KN G RID+ + S      +  A I 
Sbjct: 174 FTELLDAGFTDSFRYLHPEDVEYSWWSYRFHAREKNAGWRIDYFLTSERVKEKIEQAVIH 233

Query: 243 TKPRGWTKPSDHTPVIVSLDI 263
            +  G    SDH PV + + I
Sbjct: 234 QEIFG----SDHCPVELDISI 250


>gi|85375221|ref|YP_459283.1| exonuclease III [Erythrobacter litoralis HTCC2594]
 gi|84788304|gb|ABC64486.1| exonuclease III [Erythrobacter litoralis HTCC2594]
          Length = 265

 Score =  173 bits (437), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 75/263 (28%), Positives = 116/263 (44%), Gaps = 4/263 (1%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCG 61
           +V+V TWN+NS+R R+  +  +I +  PD++CLQE K ++  FP+E  + L Y H    G
Sbjct: 1   MVSVTTWNINSVRLRMPIVERFIDQEAPDVLCLQEIKCQEHQFPYEAFRKLGYEHFAVHG 60

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           QK Y+GVA + K    E   H   D+ + +   IE T      T+         G+    
Sbjct: 61  QKGYHGVATVGKVPFTEFSRHDWQDNGEARHVGIELTEGPAKGTVIENVYVPAGGDIPDR 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            +       +    R      +++ P +  GD+NI P   D +N          T    +
Sbjct: 121 EQNLKFGQKLDFLERMTRWADKVDRPTLIVGDFNIAPLESDVWNHKQLLKVVSHTPVEVE 180

Query: 182 SFQKLQNMGFTDAIRATH--DTHHLYSFWDYYADSWSKN-KGIRIDHIMLSPEATSLLHS 238
           + Q+  +      I   H       YS+W Y +  W KN +G R+DH+  SPE  +    
Sbjct: 181 TLQRFMDAHGWSDIGREHIRAPERYYSWWSYRSPDWRKNDRGRRLDHMWASPELAAQATG 240

Query: 239 ARIDTKPRGWTKPSDHTPVIVSL 261
            R+    R W KPSDH P+    
Sbjct: 241 HRLLEDARSWEKPSDHIPLTTEF 263


>gi|227509865|ref|ZP_03939914.1| exodeoxyribonuclease III [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
 gi|227190789|gb|EEI70856.1| exodeoxyribonuclease III [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
          Length = 252

 Score =  173 bits (437), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 67/258 (25%), Positives = 112/258 (43%), Gaps = 13/258 (5%)

Query: 4   VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +    A   ++ + D  C+QETK ++     + L     +     +
Sbjct: 1   MKFISWNVNGLRAVVKKDFAETFQKLDADFFCIQETKMQEGQLKLD-LPGYRQYFNYAER 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +P+ +   +   + D + R I   +        + +     G  +   
Sbjct: 60  KGYSGTAIFAKDEPLTVSYGIQAPEFDHEGRAITLEYP---NFYLVTSYVPNSGAKLKRL 116

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
            +        +       +L+  +P+I  GD N+     D  NP    ++A FT E RQS
Sbjct: 117 DFR---MGWDKAFHAYLNQLDSHKPVILCGDLNVAHHEIDLKNPKSNHHNAGFTDEERQS 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F KL + GF D  R  +     +YS+W Y   S  +N G RID+ + S      +  ++I
Sbjct: 174 FTKLLDQGFMDTFRHFYPDKEDIYSWWSYRFHSRDRNAGWRIDYFVTSKRLADHISDSKI 233

Query: 242 DTKPRGWTKPSDHTPVIV 259
            T   G    SDH PV +
Sbjct: 234 LTDIFG----SDHCPVEL 247


>gi|197106969|ref|YP_002132346.1| exodeoxyribonuclease III [Phenylobacterium zucineum HLK1]
 gi|196480389|gb|ACG79917.1| exodeoxyribonuclease III [Phenylobacterium zucineum HLK1]
          Length = 268

 Score =  173 bits (437), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 73/270 (27%), Positives = 117/270 (43%), Gaps = 18/270 (6%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62
           + + TWNVNS+R R+  +A +++E  PD++CLQE K  +  FP      +   H+   GQ
Sbjct: 3   LRICTWNVNSVRLRVEQVARFVREQAPDVLCLQEIKCREGEFPVNAFAEMGLPHVRIAGQ 62

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K ++GVAI S+    +         LDV               + + N Y+P G      
Sbjct: 63  KGWHGVAIASRLPIEDAPR------LDVCREGHARCVGGTVAGVEVHNFYIPAGGDTPDR 116

Query: 123 KYDDKISWIKRFLRFASQRL---ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
           + + K      F    +  L     + PL   GD N+ P  HD +N          T   
Sbjct: 117 EPNPKFDHKLDFYEKLTAELAKRNPKAPLAVVGDLNVAPGEHDVWNHRYMSKVVSHTPAE 176

Query: 180 RQSFQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLL 236
            ++F KL             T +   ++S+W Y A  + + N+G+R+DHI+++P      
Sbjct: 177 VEAFGKLVASLGFIDLPRAQTPEPEKVFSWWSYRAADFRASNRGLRLDHILVTPGLKEAA 236

Query: 237 -----HSARIDTKPRGWTKPSDHTPVIVSL 261
                 ++R+    R W +PSDH PV   L
Sbjct: 237 FRLGSAASRVHDDVRAWERPSDHAPVTADL 266


>gi|297561147|ref|YP_003680121.1| exodeoxyribonuclease III Xth [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296845595|gb|ADH67615.1| exodeoxyribonuclease III Xth [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 267

 Score =  173 bits (437), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 57/267 (21%), Positives = 105/267 (39%), Gaps = 8/267 (2%)

Query: 4   VTVATWNVNSIRARIH---NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE-- 58
           +TV++ NVN +RA          W+   + D++CLQET+ E +  P   +    +H+   
Sbjct: 1   MTVSSVNVNGLRAAAKKDPGFVGWLAGTDADVVCLQETRAEAEQLPAGVVAPEGWHVVLA 60

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
               +   GVA+ S+ +P E+       + +   R++E      T    +       G  
Sbjct: 61  PAAARGRAGVAVYSRREPDEVRVGFGHAEFEDAGRYVEVDLGGVTVA-SLYLPSGEVGTE 119

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
               K     +++   ++  ++  E    L+  GD+NI     D  N      +A F  E
Sbjct: 120 RQEEKERFMEAFLPYLVKRRAEVEERGRELVVCGDWNIAHAEVDLKNWRANRKNAGFLPE 179

Query: 179 VRQSFQKLQNM--GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
            R+   ++ +             D    Y++W Y   ++  + G RID  + +P      
Sbjct: 180 EREWLSRVLDEAGFVDVVRSLHPDQEGPYTWWSYRGRAFDNDAGWRIDLQVATPGLAGCA 239

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263
             AR++       + SDH PV V   +
Sbjct: 240 VDARVERASEHAGRWSDHAPVTVRYRV 266


>gi|254450397|ref|ZP_05063834.1| exodeoxyribonuclease III [Octadecabacter antarcticus 238]
 gi|198264803|gb|EDY89073.1| exodeoxyribonuclease III [Octadecabacter antarcticus 238]
          Length = 262

 Score =  173 bits (437), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 82/268 (30%), Positives = 120/268 (44%), Gaps = 11/268 (4%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIET 59
           MS  T+ATWN+NS+R R   +A  + +  PD++CLQE K+     P E  Q+L Y H+  
Sbjct: 1   MS-FTLATWNINSVRLREGLVARLMTQEAPDVLCLQECKSPVDKIPLEQFQALGYHHMVA 59

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            GQK YNGVAI SK    E+           +              + + N Y+P G   
Sbjct: 60  RGQKGYNGVAIFSKMPIEEVAAEDFVSLGHARHIAGRLDNG-----VTVHNFYVPAGGDK 114

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL 177
            + + ++K      +L           P      GD NI P+  D ++          T 
Sbjct: 115 PNREVNEKFGQKLDYLTEMRDYFGANAPEKSILVGDLNIAPREDDVWDHKKLLKVVSHTP 174

Query: 178 -EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSL 235
            EV           + D  RA     +LYS+W Y A  W   +KG R+DH+  +P+  + 
Sbjct: 175 VEVEHLADVQGAGDWVDVTRADIPHGNLYSWWSYRAPDWESADKGRRLDHVWATPDIANS 234

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            HS+R+    RGW +PSDH PV  + D+
Sbjct: 235 AHSSRVIRAVRGWEQPSDHAPVFATFDL 262


>gi|49476204|ref|YP_034245.1| exodeoxyribonuclease III [Bartonella henselae str. Houston-1]
 gi|49239012|emb|CAF28312.1| Exodeoxyribonuclease III [Bartonella henselae str. Houston-1]
          Length = 269

 Score =  173 bits (437), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 82/265 (30%), Positives = 123/265 (46%), Gaps = 9/265 (3%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQK 63
            +ATWN+NSIR R+  +  +++  + DI+CLQETK  D  FP +  ++  Y +I   GQK
Sbjct: 4   RLATWNINSIRLRLAQIFQYLELFSADILCLQETKCPDALFPVKAFEAAGYKYIALSGQK 63

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           SYNGVAI+S+     +           + R+I  T  +  +++RI N Y+P G  +    
Sbjct: 64  SYNGVAIVSRLPFKSVEKRFFCQ--KQECRYISVTVEVYGKSMRIHNFYVPAGGDVPDAD 121

Query: 124 YDDKISWIKRF---LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EV 179
            ++K      F   +                GD NI P P D ++          T  E 
Sbjct: 122 VNEKFRHKLDFLEEMSSIQADQGDGVSSFLVGDLNIAPLPEDVWSHKQLLKVVSHTPIET 181

Query: 180 RQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLH 237
            +        G+ D +R        LY++W Y A  W+  ++G R+DHI  SP+ TS + 
Sbjct: 182 ERLQALCCQGGWVDLMRMQFPVPTKLYTWWSYRARDWALADRGRRLDHIWSSPDLTSFVA 241

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLD 262
              I    RGW +PSDH PV    D
Sbjct: 242 ELSIFRHTRGWNQPSDHVPVQTVFD 266


>gi|126733854|ref|ZP_01749601.1| exodeoxyribonuclease III, putative [Roseobacter sp. CCS2]
 gi|126716720|gb|EBA13584.1| exodeoxyribonuclease III, putative [Roseobacter sp. CCS2]
          Length = 262

 Score =  173 bits (437), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 82/264 (31%), Positives = 120/264 (45%), Gaps = 10/264 (3%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQK 63
           T+ATWN+NS+R R   +A  +++  PD++CLQE K+     P    QSL Y H+   GQK
Sbjct: 4   TLATWNINSVRLREDIVAKLMRDEAPDVLCLQECKSPVDKIPLAQFQSLGYTHMAARGQK 63

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            YNGVAI SK   +E      G +                  + I N Y+P G  +   +
Sbjct: 64  GYNGVAIFSKIPMVE-----AGAEDYAGLGHARHIAGKLENGVTIHNHYVPAGGDVADRE 118

Query: 124 YDDKISWIKRF--LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180
            ++K      +      +   +     I  GD NI P+  D ++          T  EV 
Sbjct: 119 VNEKFGQKLDYLTDMRDAYHAQKPTKSILVGDLNIAPREDDVWDHKKLLKVVSHTPVEVA 178

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLLHSA 239
                +    ++D  R       LYS+W Y A  W   +KG R+DHI  +P+  +  HS+
Sbjct: 179 HFADVMDAGAWSDVTRNDITDGKLYSWWSYRAKDWDAADKGRRLDHIWATPDIKNAAHSS 238

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
           R+    RGW KPSDH PV  + D+
Sbjct: 239 RVLRDARGWEKPSDHAPVFATFDL 262


>gi|167648964|ref|YP_001686627.1| exodeoxyribonuclease III Xth [Caulobacter sp. K31]
 gi|167351394|gb|ABZ74129.1| exodeoxyribonuclease III Xth [Caulobacter sp. K31]
          Length = 268

 Score =  173 bits (437), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 75/270 (27%), Positives = 118/270 (43%), Gaps = 18/270 (6%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62
           + +ATWNVNS+R R    A ++ E  PD++CLQE K ++  FP E   ++   H++  GQ
Sbjct: 3   LRIATWNVNSVRLRAEQAARFVDEQAPDVLCLQEIKCQEGEFPREAFVAMGLPHLKIMGQ 62

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K ++GVAI S+              L+          +     + I N Y+P G      
Sbjct: 63  KGWHGVAIASRLPIE------DAPALNACREGHARCVSGKIAGVEIHNFYIPAGGDTPDR 116

Query: 123 KYDDKISWIKRFLRF---ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
             + K      F        ++ + + PLI  GD N+ P  +D ++          T   
Sbjct: 117 ALNPKFDHKLDFYETLTAEMKKRDPKAPLILTGDLNVAPGENDVWSHRQMSKIVSHTPVE 176

Query: 180 RQSFQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLL 236
            ++F  L            AT +   L+S+W Y A  + K N+G+R+DHI+ SP      
Sbjct: 177 LEAFAGLVGSIDFLDLPRLATPEPEKLFSWWSYRAADFRKSNRGLRLDHILASPGLRDAA 236

Query: 237 -----HSARIDTKPRGWTKPSDHTPVIVSL 261
                 S+++    R W +PSDH PV   L
Sbjct: 237 IIDGKVSSKVHDTVREWERPSDHAPVTADL 266


>gi|121602111|ref|YP_988433.1| exodeoxyribonuclease III [Bartonella bacilliformis KC583]
 gi|120614288|gb|ABM44889.1| exodeoxyribonuclease III [Bartonella bacilliformis KC583]
          Length = 271

 Score =  173 bits (437), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 82/265 (30%), Positives = 120/265 (45%), Gaps = 9/265 (3%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQK 63
            +ATWN+NSIR R   +  +++   PDI+CLQETK  D  FP E   S  Y HI   GQK
Sbjct: 4   RIATWNINSIRFRFEQVLRYLELCAPDILCLQETKCLDNLFPREVFLSAGYKHIALNGQK 63

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +Y+GVAILS+   + +           + R++        Q +RI N Y+P G      +
Sbjct: 64  AYHGVAILSRLPFVSVEKRFFCQ--KEECRYLSVVVKPYQQAIRIHNFYVPAGGDEPDVQ 121

Query: 124 YDDKISWIKRF---LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EV 179
            ++K      F   +             +  GD NI P   D ++     N    T  E 
Sbjct: 122 VNEKFRHKLDFLEEMSSIRADQGDGLSSLLMGDLNIAPLEDDVWSHKQLLNVVSHTPIET 181

Query: 180 RQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLH 237
            +        G+ D +R        LY++W Y A  W+  ++G R+DHI  SP+    + 
Sbjct: 182 ERLKALCHEGGWVDLMRMKFPVPIKLYTWWSYRARDWALADRGRRLDHIWSSPDLAPFVE 241

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLD 262
              I  + RGW+KPSDH PV    +
Sbjct: 242 DLSIFREARGWSKPSDHVPVQSVFN 266


>gi|258507959|ref|YP_003170710.1| exodeoxyribonuclease III [Lactobacillus rhamnosus GG]
 gi|257147886|emb|CAR86859.1| Exodeoxyribonuclease III [Lactobacillus rhamnosus GG]
          Length = 252

 Score =  173 bits (437), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 67/257 (26%), Positives = 108/257 (42%), Gaps = 12/257 (4%)

Query: 4   VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +         E + D  CLQETK +      + L     +     +
Sbjct: 1   MKMISWNVNGLRAVLKKDFMTIFNELDADWFCLQETKMQAGQVELD-LPGYYQYFNYAER 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K++P+ +   +   + D + R I   +T                  +   
Sbjct: 60  KGYSGTAIFTKHKPLNVTYGMGIPEHDTEGRIITLEYTKFYLMTVYTPNSGGELKRLDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +         R     +  L  ++PL++ GD N+  +P D  N     ++A FT E R  
Sbjct: 120 QQ------WDRDFLAYTNELAAKKPLVYCGDLNVAHEPIDLKNDKTNHHNAGFTDEERAD 173

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F K  N GF D  R  +     YS+W Y   + + N G RID+ + S      +  A+I 
Sbjct: 174 FTKQLNSGFIDTFRHFYPDTVTYSWWSYRFHARANNAGWRIDYFVASSAFQPYIQDAKIL 233

Query: 243 TKPRGWTKPSDHTPVIV 259
           T+  G    SDH PV +
Sbjct: 234 TQIMG----SDHCPVEL 246


>gi|224543695|ref|ZP_03684234.1| hypothetical protein CATMIT_02905 [Catenibacterium mitsuokai DSM
           15897]
 gi|224523348|gb|EEF92453.1| hypothetical protein CATMIT_02905 [Catenibacterium mitsuokai DSM
           15897]
          Length = 248

 Score =  173 bits (437), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 61/261 (23%), Positives = 111/261 (42%), Gaps = 15/261 (5%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN IRA +        K  + DI  LQETK +      + +     +     +
Sbjct: 1   MKYVSWNVNGIRACLKKGFLESFKSLDADIFALQETKAQKDQIDLD-IPGYTLYTNDAIK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AIL++ +P+ +   +  ++ D + R I   F            ++P   P +  
Sbjct: 60  KGYSGTAILTRMKPLSVSYGIGIEEYDQEGRVITLEFE--------DYYFVPCYTPNSKK 111

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +       ++    F +    L +P+I  GD N+     D  NP    ++A F+ + R  
Sbjct: 112 ELARIDYRMEWEDAFLAYLDALNKPVILCGDLNVAHHEIDLKNPSSNHHNAGFSDQERSK 171

Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             +L + G+ D  R  +      Y++W Y   S  +N G RID+ ++S      +  + I
Sbjct: 172 MTELLSHGYIDTFRYLYPDKKDAYTWWSYMFKSRERNAGWRIDYFIVSESLKERIKESLI 231

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            +   G    SDH P+ + ++
Sbjct: 232 YSDILG----SDHCPIGLEME 248


>gi|30585287|gb|AAP36916.1| Homo sapiens APEX nuclease (multifunctional DNA repair enzyme) 1
           [synthetic construct]
 gi|60653967|gb|AAX29676.1| APEX nuclease 1 [synthetic construct]
          Length = 319

 Score =  173 bits (437), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 73/269 (27%), Positives = 125/269 (46%), Gaps = 17/269 (6%)

Query: 2   SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN----YH 56
           + + + +WNV+ +RA I      W+KE  PDI+CLQETK  +   P E  +       Y 
Sbjct: 60  ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQYW 119

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                ++ Y+GV +LS+  P+++   +  ++ D + R I A F      + +       G
Sbjct: 120 SAPSDKEGYSGVGLLSRQCPLKVSYGIGEEEHDQEGRVIVAEF---DSFVLVTAYVPNAG 176

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
             +   +Y  +     R      + L   +PL+  GD N+  +  D  NP   + +A FT
Sbjct: 177 RGLVRLEYRQRWDEAFRKF---LKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 233

Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E +   + LQ +   D+ R  +    + Y+FW Y  ++ SKN G R+D+ +LS     
Sbjct: 234 PQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLP 293

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            L  ++I +K  G    SDH P+ + L +
Sbjct: 294 ALCDSKIRSKALG----SDHCPITLYLAL 318


>gi|125490347|ref|NP_001074954.1| DNA-(apurinic or apyrimidinic site) lyase [Pan troglodytes]
 gi|146286033|sp|A1YFZ3|APEX1_PANPA RecName: Full=DNA-(apurinic or apyrimidinic site) lyase; AltName:
           Full=APEX nuclease; Short=APEN; AltName:
           Full=Apurinic-apyrimidinic endonuclease 1; Short=AP
           endonuclease 1; AltName: Full=REF-1; AltName: Full=Redox
           factor-1; Contains: RecName: Full=DNA-(apurinic or
           apyrimidinic site) lyase, mitochondrial
 gi|146286034|sp|A2T6Y4|APEX1_PANTR RecName: Full=DNA-(apurinic or apyrimidinic site) lyase; AltName:
           Full=APEX nuclease; Short=APEN; AltName:
           Full=Apurinic-apyrimidinic endonuclease 1; Short=AP
           endonuclease 1; AltName: Full=REF-1; AltName: Full=Redox
           factor-1; Contains: RecName: Full=DNA-(apurinic or
           apyrimidinic site) lyase, mitochondrial
 gi|219474|dbj|BAA02633.1| APEX nuclease [Homo sapiens]
 gi|1710232|gb|AAB50212.1| apurinic/apyrimidinic endonuclease [Homo sapiens]
 gi|12803075|gb|AAH02338.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Homo sapiens]
 gi|14198174|gb|AAH08145.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Homo sapiens]
 gi|17939646|gb|AAH19291.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Homo sapiens]
 gi|30583311|gb|AAP35900.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Homo sapiens]
 gi|61358640|gb|AAX41599.1| APEX nuclease 1 [synthetic construct]
 gi|61362429|gb|AAX42220.1| APEX nuclease 1 [synthetic construct]
 gi|61362434|gb|AAX42221.1| APEX nuclease 1 [synthetic construct]
 gi|121483845|gb|ABM54218.1| APEX1 [Pan paniscus]
 gi|123981822|gb|ABM82740.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [synthetic
           construct]
 gi|123996645|gb|ABM85924.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [synthetic
           construct]
 gi|124111123|gb|ABM91939.1| APEX1 [Pan troglodytes]
 gi|208965824|dbj|BAG72926.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [synthetic
           construct]
 gi|1090503|prf||2019234A APEX nuclease
          Length = 318

 Score =  173 bits (437), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 73/269 (27%), Positives = 125/269 (46%), Gaps = 17/269 (6%)

Query: 2   SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN----YH 56
           + + + +WNV+ +RA I      W+KE  PDI+CLQETK  +   P E  +       Y 
Sbjct: 60  ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQYW 119

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                ++ Y+GV +LS+  P+++   +  ++ D + R I A F      + +       G
Sbjct: 120 SAPSDKEGYSGVGLLSRQCPLKVSYGIGEEEHDQEGRVIVAEF---DSFVLVTAYVPNAG 176

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
             +   +Y  +     R      + L   +PL+  GD N+  +  D  NP   + +A FT
Sbjct: 177 RGLVRLEYRQRWDEAFRKF---LKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 233

Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E +   + LQ +   D+ R  +    + Y+FW Y  ++ SKN G R+D+ +LS     
Sbjct: 234 PQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLP 293

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            L  ++I +K  G    SDH P+ + L +
Sbjct: 294 ALCDSKIRSKALG----SDHCPITLYLAL 318


>gi|229551812|ref|ZP_04440537.1| exodeoxyribonuclease III [Lactobacillus rhamnosus LMS2-1]
 gi|229314756|gb|EEN80729.1| exodeoxyribonuclease III [Lactobacillus rhamnosus LMS2-1]
          Length = 253

 Score =  172 bits (436), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 66/258 (25%), Positives = 108/258 (41%), Gaps = 12/258 (4%)

Query: 3   VVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++ + +WNVN +RA +         E + D  CLQETK +      + L     +     
Sbjct: 1   MLKMISWNVNGLRAVLKKDFMTIFNELDADWFCLQETKMQAGQVELD-LPGYYQYFNYAE 59

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G AI +K++P+ +   +   + D + R I   +                   +  
Sbjct: 60  RKGYSGTAIFTKHKPLNVTYGMGIPEHDTEGRIITLEYPKFYLMTVYTPNSGGELKRLDY 119

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            +         R     +  L  ++PL++ GD N+  +P D  N     ++A FT E R 
Sbjct: 120 RQQ------WDRDFLAYTNELAAKKPLVYCGDLNVAHEPIDLKNDKTNHHNAGFTDEERA 173

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
            F K  N GF D  R  +     YS+W Y   + + N G RID+ + S      +  A+I
Sbjct: 174 DFTKQLNSGFIDTFRHFYPDTVTYSWWSYRFHARANNAGWRIDYFVASSAFQPYIQDAKI 233

Query: 242 DTKPRGWTKPSDHTPVIV 259
            T+  G    SDH PV +
Sbjct: 234 LTQIMG----SDHCPVEL 247


>gi|297618884|ref|YP_003706989.1| exodeoxyribonuclease III Xth [Methanococcus voltae A3]
 gi|297377861|gb|ADI36016.1| exodeoxyribonuclease III Xth [Methanococcus voltae A3]
          Length = 249

 Score =  172 bits (436), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 72/261 (27%), Positives = 111/261 (42%), Gaps = 15/261 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKT-EDKNFPFETLQSLNYHIETCG 61
           + + +WNVN I+A +      ++K+ NPDI+CLQE KT          L     +  T  
Sbjct: 1   MKLISWNVNGIKAILQKGFVDFVKQENPDILCLQEIKTNSPSQI--LDLSEYKQYWNTAS 58

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G AI +K +P  I   +     +                +          +    
Sbjct: 59  KKGYSGTAIFTKQKPKNITYGMDNFPDEEGRVITAEYDNYYLVNVY------TPNSQRGL 112

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
           T+ D ++ W  +FL +    L   +PLIF GD N+  +  D  NP   +  A FT E R 
Sbjct: 113 TRLDYRMKWDTKFLEYLLS-LNESKPLIFCGDLNVAHKEIDLKNPKTNKKHAGFTEEERM 171

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
            F K     F D  R  +     Y++W Y  ++ +KN G RID+   S    + +  + I
Sbjct: 172 GFDKYVENNFVDTFRLFNKESDNYTWWSYMHNARAKNIGWRIDYFCTSNSIVNYVKKSVI 231

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
             K  G    SDH P+ + LD
Sbjct: 232 LDKIYG----SDHCPIKLELD 248


>gi|303256316|ref|ZP_07342332.1| exodeoxyribonuclease III [Burkholderiales bacterium 1_1_47]
 gi|302861045|gb|EFL84120.1| exodeoxyribonuclease III [Burkholderiales bacterium 1_1_47]
          Length = 262

 Score =  172 bits (436), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 62/263 (23%), Positives = 105/263 (39%), Gaps = 12/263 (4%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFET-LQSLNY-HIET 59
           V+ + T N N IR+ +      W+ + + DI+C+QE K +    P E  L    Y ++  
Sbjct: 5   VLKIITINTNGIRSAVNKGFHLWLAKQDADIVCIQELKAQPDEVPDEINLDGAFYRYVHC 64

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G AIL++ +P E++     ++ D + R++EA F        I           
Sbjct: 65  AEKKGYSGCAILTRKKPDEVIIGFGNEEFDREGRYVEARFNN-----LIVVSIYFPSGSS 119

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
           +  +   K  ++        + L     ++  GD+NI  +  D  N      ++ F  E 
Sbjct: 120 SEERQQAKFRFLDVIKGRLDELLRDGRDVVLCGDFNIAHKEIDIKNWKGNLKNSGFLPEE 179

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           RQ        G+ D  R        +++W     +   N G RID+   +P   S     
Sbjct: 180 RQWITDRLREGWQDVFRRLDPRPDRFTWWSNRGRARINNVGWRIDYQFSTPAIASTAKET 239

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
            I    R     SDH P+ V  D
Sbjct: 240 DIYRDER----FSDHAPLTVVYD 258


>gi|303234331|ref|ZP_07320970.1| exodeoxyribonuclease III [Finegoldia magna BVS033A4]
 gi|302494447|gb|EFL54214.1| exodeoxyribonuclease III [Finegoldia magna BVS033A4]
          Length = 253

 Score =  172 bits (436), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 64/262 (24%), Positives = 105/262 (40%), Gaps = 13/262 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFET-LQSLNYHIETCG 61
           + + +WNVN  RA +           N DI CLQE K ++     E  ++  + +  +  
Sbjct: 1   MKLISWNVNGYRAVMKKGFMDAFNSLNADIFCLQEIKMKENQMTDEMNIEGYHRYSYSAN 60

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +  Y+G  + +K +PI +   +  D+ D + R I   +        +          +  
Sbjct: 61  KAGYSGTLVYTKVEPIGVSFGIGIDEHDTEGRVITCEYE---DFFLVNVYTPNSKQKLER 117

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
             Y       +         L   +P+I  GD N+     D  NP      A FT E R 
Sbjct: 118 LDYR---MVWEDEFHNYLNILRDRKPVIVCGDLNVAHNEIDLKNPQSNRRSAGFTDEERN 174

Query: 182 SFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
               L N G+ D  R  +      YS+W Y+A +  +N G RID+ ++S +    L  A+
Sbjct: 175 KMSLLLNDGYIDTFRYFYPDKTDEYSYWSYFAKARERNAGWRIDYFIVSDDLKDNLVDAK 234

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I     G    SDH PV + ++
Sbjct: 235 IHQSIMG----SDHCPVELEIN 252


>gi|254428681|ref|ZP_05042388.1| exodeoxyribonuclease III [Alcanivorax sp. DG881]
 gi|196194850|gb|EDX89809.1| exodeoxyribonuclease III [Alcanivorax sp. DG881]
          Length = 271

 Score =  172 bits (436), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 72/270 (26%), Positives = 125/270 (46%), Gaps = 11/270 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +T+ ++N+N IRAR+H L   I +  P +I LQETK  D  FP + ++ + YH    GQK
Sbjct: 1   MTLISFNINGIRARLHQLQTVIDKYQPALIGLQETKVHDPEFPEQAVRDMGYHPYFFGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL--RIGNLYLPHGNPITS 121
            + GVA++++     +    P D+ D Q R I  T   +  +L   +   +    N    
Sbjct: 61  GHYGVALITREPLESVQYGFPTDEEDAQRRMIIGTLKHSDGSLITVLNGYFPQGENREHP 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACF 175
           TK+  K  + +    +     +  + +   GD+NI                 + E    F
Sbjct: 121 TKFPAKKKFYEDLQHYLINHHQPSDQVAVMGDFNISSTDLDIGIGEANRKRWLREGKTSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKN--KGIRIDHIMLSPEA 232
             E R+ +++L   G TD  R  +  T  ++S++DY +  + +   +G+RID ++ +   
Sbjct: 181 LPEEREWWERLVGWGLTDTYRHQNPSTDDVFSWFDYRSKGFDREPRRGLRIDTVLATQPL 240

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
            + L +  +D   RG  KPSDH PV    +
Sbjct: 241 MAKLDTTGVDYDMRGMEKPSDHCPVWARFN 270


>gi|315452849|ref|YP_004073119.1| exodeoxyribonuclease [Helicobacter felis ATCC 49179]
 gi|315131901|emb|CBY82529.1| exodeoxyribonuclease [Helicobacter felis ATCC 49179]
          Length = 255

 Score =  172 bits (436), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 65/262 (24%), Positives = 111/262 (42%), Gaps = 13/262 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      ++ ++  DI C+QETK +     F   ++ +    +  +
Sbjct: 1   MRLVSWNVNGLRACMQKGFKDFLLKSGADIFCVQETKMQPDQADF-VFENYHAFWNSAQK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+GV  LSK  P+++   L  ++ D + R I   +      + +       G      
Sbjct: 60  KGYSGVLTLSKSAPLDVRYGLGLEEHDTEGRVITCEYE-YFYLVNVYTPNSQRGLLRLPY 118

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +        +   R   Q L   + ++  GD N+     D  NP     +A F+   R +
Sbjct: 119 RLQ-----WESVFREFLQNLASHKEVLICGDLNVAHTEIDLTNPQSNRYNAGFSDPERNA 173

Query: 183 FQKLQNMGFTDAIRATHDTHHL-YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L  +G  D  R  +      Y++W Y   S ++N G RID+ + S    S L  A I
Sbjct: 174 FGQLLQLGLIDTYRHFYPDKTEVYTWWSYMNQSRARNIGWRIDYFLASQGLRSQLKDACI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
                G    SDH PV + + I
Sbjct: 234 YAHILG----SDHCPVGLEMSI 251


>gi|313682316|ref|YP_004060054.1| exodeoxyribonuclease iii [Sulfuricurvum kujiense DSM 16994]
 gi|313155176|gb|ADR33854.1| exodeoxyribonuclease III [Sulfuricurvum kujiense DSM 16994]
          Length = 258

 Score =  172 bits (436), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 74/262 (28%), Positives = 107/262 (40%), Gaps = 14/262 (5%)

Query: 6   VATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL--NYHIETCGQ 62
           + +WNVN IRA        W++E  P I+CLQE K   +  P         N  + +  +
Sbjct: 7   IISWNVNGIRAVAEKGGFDWLEERQPHIVCLQEIKALSEQIPQNLFSHHFSNITVNSAEK 66

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G    SK +PI   T    D ++           I    +   N            
Sbjct: 67  KGYSGTLTASKLEPIYSDTRADIDIMNEGRIVEHHYGDIALFNVYFPN------GQKDEE 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +   K+ + +RFL +        + +I  GD N   +P D  NP   E  + F    R  
Sbjct: 121 RLAYKLEFYERFLDYCEALRREGKKIIICGDVNTAHRPIDLKNPKSNEKTSGFLPIERDW 180

Query: 183 FQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             KL + G+ D  R  H D  + YS+W Y   + SKN G RID+  +S +    L  A I
Sbjct: 181 IDKLLSHGYIDTFRHVHGDKENEYSWWSYRFSARSKNVGWRIDYFFISDDLAESLEDAFI 240

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
             +  G    SDH PV + L I
Sbjct: 241 LQEIMG----SDHCPVGIRLKI 258


>gi|257054579|ref|YP_003132411.1| exodeoxyribonuclease III [Saccharomonospora viridis DSM 43017]
 gi|256584451|gb|ACU95584.1| exodeoxyribonuclease III [Saccharomonospora viridis DSM 43017]
          Length = 265

 Score =  172 bits (436), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 51/266 (19%), Positives = 101/266 (37%), Gaps = 6/266 (2%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET-- 59
           ++TV+T NVN +RA      + W +  + D++  QE + +    P    +   +H     
Sbjct: 1   MLTVSTVNVNGLRAAAKKGFSEWFEATSADVVACQEVRADPGVLPDALREPPGWHTVHAA 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
           C  K  NGV + S+ +P  +       + +   R++E           +       G P 
Sbjct: 61  CATKGRNGVCLYSRIEPESVRVGFGEAEFEDSGRYVEMWLPRVVVG-SLYLPSGEVGTPR 119

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K     +++        +     + ++  GD+NI     D  N      ++ F  E 
Sbjct: 120 QEEKERFMDTFLPYLATLRDKASSEGKEVLVVGDWNIAHAEVDLKNWKANRKNSGFLPEE 179

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHL--YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
           R    ++ +      ++   D      Y++W Y   ++  + G RID+ + +P       
Sbjct: 180 RAWLSRVFDELGYVDVQRHLDPEGPGPYTWWSYRGRAFDNDAGWRIDYQIATPGLAQRCT 239

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263
           S  ++       + SDH PV  + +I
Sbjct: 240 SMVVERAESYDKRWSDHAPVTATYEI 265


>gi|313202195|ref|YP_004040853.1| exodeoxyribonuclease III xth [Methylovorus sp. MP688]
 gi|312441511|gb|ADQ85617.1| exodeoxyribonuclease III Xth [Methylovorus sp. MP688]
          Length = 260

 Score =  172 bits (436), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 72/267 (26%), Positives = 122/267 (45%), Gaps = 15/267 (5%)

Query: 1   MSVVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HI 57
           MS+  + + N+N IR A       W+++ N DI+C+QE K +  +   E L    Y  + 
Sbjct: 1   MSLYRIISANLNGIRSAANKGFYPWLQQQNADIVCMQELKAQLADMTPEMLNPEGYFGYF 60

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
               +K Y+GV I ++ QP  ++  L   D+D + R++E    +    L + +LYLP G+
Sbjct: 61  HYAEKKGYSGVGIYTRVQPDAVIVGLGIADIDAEGRYLE----LQFGNLSVVSLYLPSGS 116

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
                +   K S + RFL            ++  GD+NI  +  D  N    + ++ F  
Sbjct: 117 -SGEERQAFKFSVMTRFLVHLEALRAAGRDVVICGDWNIAHKEADLKNWKGNKKNSGFLP 175

Query: 178 EVRQSFQKLQNM-GFTDAIRATHDT--HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
           E R     L +  G+ D  R  H       Y++W     +W+KN G RID+ + +P+  +
Sbjct: 176 EERAWLTDLFDRVGWVDVYRVLHPDTTDECYTWWSNRGQAWAKNVGWRIDYQIATPDFAA 235

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261
              +A I        + SDH P+I+  
Sbjct: 236 KAIAASIYK----LERFSDHAPLIIDY 258


>gi|260578461|ref|ZP_05846375.1| exodeoxyribonuclease III [Corynebacterium jeikeium ATCC 43734]
 gi|258603483|gb|EEW16746.1| exodeoxyribonuclease III [Corynebacterium jeikeium ATCC 43734]
          Length = 266

 Score =  172 bits (436), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 75/271 (27%), Positives = 121/271 (44%), Gaps = 18/271 (6%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+NS+R R   +  +++ ++ D++CLQETK  DK FP        Y     G  
Sbjct: 1   MRIATWNINSVRTREDRVREFLQRSDVDVLCLQETKCTDKQFP--DFTDTGYEQAHFGLH 58

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQ----ARFIEATFTINTQTLRIGNLYLPHGNPI 119
           S+NGVAILS+    ++ T       +                    + + +LY+P+G  I
Sbjct: 59  SFNGVAILSRVGLTDVQTDFGQPGFNKDLDAEQALEARAIGAICGGVEVWSLYVPNGREI 118

Query: 120 TSTKYDDKISWIKRFLRFA------SQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
               Y  K+ W+     +A      + + +  E L   GDYNI P+  D ++   ++   
Sbjct: 119 ADPHYSYKLRWLDALAAYAAGSGVGASQRKSSEKLCLVGDYNIAPRDEDVWDRSYFDGRT 178

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
             T   R   + L++ G + A          Y++WDY A  + K +G+RID        T
Sbjct: 179 HVTPNERARLRALEDAGLSAATDLI---ADEYTYWDYQAMRFQKGEGMRIDLQYA-RGIT 234

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
               +AR+D   R     SDH PVIV  ++ 
Sbjct: 235 P--TAARVDRDERKGKGASDHAPVIVDYNVD 263


>gi|148259431|ref|YP_001233558.1| exodeoxyribonuclease III Xth [Acidiphilium cryptum JF-5]
 gi|146401112|gb|ABQ29639.1| exodeoxyribonuclease III Xth [Acidiphilium cryptum JF-5]
          Length = 267

 Score =  172 bits (436), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 82/268 (30%), Positives = 117/268 (43%), Gaps = 6/268 (2%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIET 59
           M+ +TVATWN+NS+R R   L + + +  PDI+CLQETK  D  FP +   +L   H+  
Sbjct: 1   MTALTVATWNINSVRLRRDLLHSLMDQAAPDIVCLQETKVPDDLFPEDLGTALGLPHVLK 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            G K YNGVAILS+     +    P   +    R I A     T  L + N Y+P G  I
Sbjct: 61  RGMKGYNGVAILSRLPLTAVE-DTPDWCMKSDCRHIAARIDTGTDPLVLHNFYVPAGGDI 119

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFA--GDYNIIPQPHDCYNPIIWENDACF-T 176
                + K      F+  A     +  P      GD NI P  +D ++     N      
Sbjct: 120 PDRAENPKYGHKLDFIAEARDHFAMNRPHRTMLVGDLNIAPLENDVWSHKQLLNVVSHTP 179

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSL 235
            E                     D   L+++W Y    W + N+G R+DHI +S +    
Sbjct: 180 PETEGLNAWRTEGFIDAIRHFVPDDQKLFTWWSYRNRDWRASNRGRRLDHIWVSTDLIGN 239

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           L    I    R W + SDH PV+++LD+
Sbjct: 240 LARHAILQDARDWERGSDHVPVVLTLDL 267


>gi|289450732|ref|YP_003475042.1| exodeoxyribonuclease III [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
 gi|289185279|gb|ADC91704.1| exodeoxyribonuclease III [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
          Length = 251

 Score =  172 bits (436), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 75/262 (28%), Positives = 114/262 (43%), Gaps = 13/262 (4%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           +  + +WNVN +RA +       ++  + DIIC+QE+K +      + L     +     
Sbjct: 1   MTKLISWNVNGLRACVEKGFVESMQHLSADIICIQESKLQAGQIDLD-LPGYCQYWNYAR 59

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G AI SK +P+ +   +   D D + R I A F        +       G     
Sbjct: 60  KKGYSGTAIFSKIEPLRVTYGMNMPDHDQEGRLITAEFPDYYLC-TVYTPNSQDGLKRLV 118

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            +        +R      Q L   +P+I  GD N+  +  D  NP     +  FT E R 
Sbjct: 119 YRQ-----SWERDFLTYLQELRRVKPVIICGDLNVAHREIDLKNPAANRKNPGFTDEERA 173

Query: 182 SFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            FQ L + GF D  R  +      YS+W Y  ++ S+N G RID+ ++S E T  L SA 
Sbjct: 174 EFQTLLDAGFVDTFRYFYPEKPEEYSWWSYRFNARSRNAGWRIDYFLVSNELTDRLQSAS 233

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I  +  G    SDH PV + L 
Sbjct: 234 IHQEIFG----SDHCPVELILK 251


>gi|294678851|ref|YP_003579466.1| exodeoxyribonuclease III [Rhodobacter capsulatus SB 1003]
 gi|294477671|gb|ADE87059.1| exodeoxyribonuclease III-2 [Rhodobacter capsulatus SB 1003]
          Length = 262

 Score =  172 bits (436), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 86/268 (32%), Positives = 116/268 (43%), Gaps = 11/268 (4%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIET 59
           MS  T+ATWN+NS+R R   +   + E  PD++CLQE K+     PF     L Y +   
Sbjct: 1   MS-FTLATWNINSVRLREALVCKLMTEEAPDVLCLQECKSPVDKIPFAAFAELGYRYHVA 59

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            GQK YNGVAILSK   +E       +    +              + I N Y+P G  I
Sbjct: 60  RGQKGYNGVAILSKLPMVEAGAGDYANLGHARHIAGRLENG-----VTIHNFYVPAGGDI 114

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL 177
                ++K      FL         + P      GD NI P+  D +N          T 
Sbjct: 115 PDRAENEKFGQKLDFLSHMRDDFHAQRPDRAILVGDLNIAPREDDVWNHKALLKIVSHTP 174

Query: 178 -EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSL 235
            EV          G+ D  RA      LYS+W Y +  W   +KG R+DHI  +P+    
Sbjct: 175 IEVEHLAAAQDAGGWVDVTRADIPEGQLYSWWSYRSPDWDGADKGRRLDHIWATPDIAGA 234

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            H +RI    RGW +PSDH PV  + D+
Sbjct: 235 AHGSRILRAARGWEQPSDHAPVFATFDL 262


>gi|46201082|ref|ZP_00055781.2| COG0708: Exonuclease III [Magnetospirillum magnetotacticum MS-1]
          Length = 263

 Score =  172 bits (436), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 78/264 (29%), Positives = 119/264 (45%), Gaps = 5/264 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62
           + + TWN+NSIR RI  L+      NPDIICLQE K +D  FP +  + + + HI   G 
Sbjct: 1   MRLVTWNINSIRLRIDLLSQVASVMNPDIICLQEIKVDDPLFPLDQCREMGFGHIAFHGM 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K YNGVAILS+    E          D +         +    L I        +P T+ 
Sbjct: 61  KGYNGVAILSRLPIAEWRPMSRCGRDDRRHLMARLENGVQIHCLYIPAG-GDIPDPETND 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           K+  K+ +++    +A+  +  E+ +I AGD+NI P  +D ++          T      
Sbjct: 120 KFAHKLDFVREITAWAAAEIRPEDKVILAGDFNIAPLENDVWSHKQMLKVISHTPAEVDL 179

Query: 183 FQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSWSKN-KGIRIDHIMLSPEATSLLHSA 239
                                  LY++W Y +  W KN +G R+DH+ ++P     L   
Sbjct: 180 LNAFLASVPFVDAMRHFVPPEDKLYTWWSYRSPDWQKNDRGRRLDHVWVTPALAPSLRGM 239

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
            +  + R WT+PSDH PV+V  D+
Sbjct: 240 LVAREARAWTQPSDHVPVMVDFDL 263


>gi|48477699|ref|YP_023405.1| exodeoxyribonuclease III [Picrophilus torridus DSM 9790]
 gi|48430347|gb|AAT43212.1| exodeoxyribonuclease III [Picrophilus torridus DSM 9790]
          Length = 250

 Score =  172 bits (436), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 80/259 (30%), Positives = 126/259 (48%), Gaps = 14/259 (5%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + +WNVN IRA +   +  +I E NPDI+ LQE K+   + P E L  + Y I     
Sbjct: 1   MKILSWNVNGIRAAVKNGILNFINEENPDIVLLQEIKSGKNDLP-EELHHMGYKIFINPA 59

Query: 62  -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+G   LSK +P++  + +   D D + R     +        I N Y P+     
Sbjct: 60  EKKGYSGTMALSKVEPLDYSSGIGIKDYDSEGRVQILKYD----NFYIINTYFPNSQH-G 114

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
            T+ D KI +  +FL F  + L  E+PLI  GD+N+  +  D   P   EN+A FT++ R
Sbjct: 115 LTRLDYKIDFDNKFLEFCEK-LRKEKPLIITGDFNVAHEEIDIARPKDNENNAGFTIQER 173

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
               +  N G+ D  R  H     YS+W Y  ++ +KN G RID+ +++ +    +  + 
Sbjct: 174 NWMTEFLNHGYIDTYRYFHKEPGHYSWWSYRFNARAKNIGWRIDYFIVTDDFIKNVKDSI 233

Query: 241 IDTKPRGWTKPSDHTPVIV 259
           I        K SDH P+ +
Sbjct: 234 ILENV----KGSDHAPLEL 248


>gi|311742697|ref|ZP_07716506.1| exodeoxyribonuclease III [Aeromicrobium marinum DSM 15272]
 gi|311314325|gb|EFQ84233.1| exodeoxyribonuclease III [Aeromicrobium marinum DSM 15272]
          Length = 274

 Score =  172 bits (436), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 64/273 (23%), Positives = 111/273 (40%), Gaps = 12/273 (4%)

Query: 2   SVVTVATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           +V+ +AT NVN +RA  +        LA W+   + D++ LQE +  D     E L    
Sbjct: 3   AVLRIATVNVNGVRAAWNKSRGQTSGLAEWLAGRDADVVTLQEVRAPDA-LVRELLAGTG 61

Query: 55  YHIETCGQ--KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           YH+       K   GVA+LS+ +P+ +         D   R+IEA   +   ++      
Sbjct: 62  YHVAHTEAAAKGRAGVAVLSRVEPVAVRVGNGDAFFDDSGRWIEADVPLADGSVLTVVSA 121

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
             H     + + D+K  +++R     ++        +  GD N+   P D  N       
Sbjct: 122 YVHSGEAGTPRQDEKYRFLERTGARMAEISASGTHGLLTGDLNVAHTPRDIRNAKGNLKK 181

Query: 173 ACFTLEVRQSFQKLQNM--GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230
           A F  E R  F +  +         R   D    Y++W     ++  + G RIDH + +P
Sbjct: 182 AGFLPEERAHFDRWFDELGWVDVPRRLAGDVDGPYTWWSMRGQAFDNDTGWRIDHQIATP 241

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +  +   +A +D       + SDH P++V   +
Sbjct: 242 DLATAATTAAVDRAESWAERWSDHAPLVVDYAL 274


>gi|42527240|ref|NP_972338.1| exodeoxyribonuclease III [Treponema denticola ATCC 35405]
 gi|41817664|gb|AAS12249.1| exodeoxyribonuclease III [Treponema denticola ATCC 35405]
          Length = 256

 Score =  172 bits (436), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 61/259 (23%), Positives = 103/259 (39%), Gaps = 17/259 (6%)

Query: 6   VATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS------LNYHIE 58
           + +WNVN IRA        W+   NPD++C+QETK        E  +          +  
Sbjct: 4   IISWNVNGIRAVEKKGFLDWLNTENPDVLCVQETKAAKAQLSKELTEPDLPNGKYFAYWA 63

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
           +  +  Y+G AI +K +P+++ T    +  D     +     ++              + 
Sbjct: 64  SAKKAGYSGTAIFTKKEPLQVRTMGLKEFDDEGRVLVADFDKVS------IISAYFPNSQ 117

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
               + D K+ +    L F     E    +I  GD+NI  +P D  NP   E +  +  E
Sbjct: 118 DGGARLDYKLDFCAAILEFCDSVQEEGNNVILCGDFNIAHKPIDLANPKSNEKNPGYLPE 177

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
            R    +  + G+TD  R        Y++W Y   +  KN G R+D+  ++    + +  
Sbjct: 178 ERAWMDEFTSSGYTDTFRHFCKEPAKYTWWSYRFRAREKNIGWRLDYHCVNDSFLAKIKE 237

Query: 239 ARIDTKPRGWTKPSDHTPV 257
           + I     G    SDH PV
Sbjct: 238 SIILDGVMG----SDHCPV 252


>gi|258539213|ref|YP_003173712.1| exodeoxyribonuclease III [Lactobacillus rhamnosus Lc 705]
 gi|257150889|emb|CAR89861.1| Exodeoxyribonuclease III [Lactobacillus rhamnosus Lc 705]
          Length = 252

 Score =  172 bits (436), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 66/257 (25%), Positives = 107/257 (41%), Gaps = 12/257 (4%)

Query: 4   VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +         E + D  CLQETK +      + L     +     +
Sbjct: 1   MKMISWNVNGLRAVLKKDFMTIFNELDADWFCLQETKMQAGQVELD-LPGYYQYFNYAER 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K++P+ +   +   + D + R I   +                   +   
Sbjct: 60  KGYSGTAIFTKHKPLNVTYGMGIPEHDTEGRIITLEYPKFYLMTVYTPNSGGELKRLDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +         R     +  L  ++PL++ GD N+  +P D  N     ++A FT E R  
Sbjct: 120 QQ------WDRDFLAYTNELAAKKPLVYCGDLNVAHEPIDLKNDKTNHHNAGFTDEERAD 173

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F K  N GF D  R  +     YS+W Y   + + N G RID+ + S      +  A+I 
Sbjct: 174 FTKQLNSGFIDTFRHFYPDTVTYSWWSYRFHARANNAGWRIDYFVASSAFQPYIQDAKIL 233

Query: 243 TKPRGWTKPSDHTPVIV 259
           T+  G    SDH PV +
Sbjct: 234 TQIMG----SDHCPVEL 246


>gi|223278420|ref|NP_001138591.1| DNA-(apurinic or apyrimidinic site) lyase [Canis lupus familiaris]
          Length = 318

 Score =  172 bits (436), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 73/269 (27%), Positives = 125/269 (46%), Gaps = 17/269 (6%)

Query: 2   SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN----YH 56
           + + + +WNV+ +RA I      W+KE  PDI+CLQETK  +   P E  +       Y 
Sbjct: 60  ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLPHQYW 119

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                ++ Y+GV +LS+  P+++   +  ++ D + R I A F      + +       G
Sbjct: 120 SAPSDKEGYSGVGLLSRQCPLKVSYGIGEEEHDQEGRVIVAEFDTF---VLVTAYVPNAG 176

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
             +   +Y  +     R      + L   +PL+  GD N+  +  D  NP   + +A FT
Sbjct: 177 RGLVRLEYRQRWDEAFRKF---LKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 233

Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E +   + LQ +   D+ R  +    + Y+FW Y  ++ SKN G R+D+ +LS     
Sbjct: 234 PQERQGFGELLQAVPLADSFRHLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLP 293

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            L  ++I +K  G    SDH P+ + L +
Sbjct: 294 ALCDSKIRSKALG----SDHCPITLYLAL 318


>gi|255327369|ref|ZP_05368443.1| exodeoxyribonuclease III [Rothia mucilaginosa ATCC 25296]
 gi|255295649|gb|EET74992.1| exodeoxyribonuclease III [Rothia mucilaginosa ATCC 25296]
          Length = 291

 Score =  172 bits (436), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 66/279 (23%), Positives = 113/279 (40%), Gaps = 17/279 (6%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC- 60
           ++ VA+ NVN IRA    ++AAW+   + DI+CLQE +  D     E L    +HI    
Sbjct: 14  LLRVASVNVNGIRAAYKKDMAAWLASRDIDILCLQEVRAPDA-IVRELLDESQWHILHAE 72

Query: 61  ------------GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108
                        +++ N    L + QP+   +++  +  D   R++EA + +       
Sbjct: 73  AAAKGRAGVLVATRRTPNSAGELLENQPVATRSNIGEEYFDDSGRWVEADYVLPNGKTLT 132

Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168
                 H   + + K DDK  +++R L    +  +  + ++  GD N+     D  N   
Sbjct: 133 VVSAYVHSGEVGTQKQDDKYRFLERMLVRMPELAKHSDHVLIVGDLNVGHTELDIKNWKA 192

Query: 169 WENDACFTLEVRQSFQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226
            +  A F  E R  F +          A          Y++W Y   ++  + G RID+ 
Sbjct: 193 NQKRAGFLPEERAYFDRFFGDIGYRDVARELAGQVPGPYTWWSYRGKAFDNDAGWRIDYH 252

Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           M +P        A +D       + SDH P++V   I E
Sbjct: 253 MATPALAESAVEAVVDRAASYDERFSDHAPLVVDYRIGE 291


>gi|227498619|ref|ZP_03928763.1| conserved hypothetical protein [Acidaminococcus sp. D21]
 gi|226904075|gb|EEH89993.1| conserved hypothetical protein [Acidaminococcus sp. D21]
          Length = 251

 Score =  172 bits (436), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 64/260 (24%), Positives = 115/260 (44%), Gaps = 13/260 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + TWNVN +RA +       +++ + DII +QETK + +   F+       +  +  +
Sbjct: 1   MKLVTWNVNGLRACMNKGFKESMEKLDADIISIQETKMQREQASFD-FPGYYEYWNSAVK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI S+ +P+ +   L  ++ D + R I A +        + N+Y P+     + 
Sbjct: 60  KGYSGTAIFSRIKPLSVTYGLGIEEHDQEGRVITAEYD----DFYLVNVYTPNSQRELAR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +   +   + L  ++  I  GD N+  +P D  NP    ++A F+ E RQ 
Sbjct: 116 L--SYRMAWEDAFQAYCEDLSKKKTTIVCGDMNVAHEPIDLKNPDSNHHNAGFSDEERQK 173

Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
                  GF D+ R  +      Y++W Y   +  +N G RID+ ++S      +    I
Sbjct: 174 LDAFLARGFVDSFRMLYPDREGAYTWWSYMFKARERNAGWRIDYFLVSEAGRDKIRDVTI 233

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
             +  G    SDH PV++  
Sbjct: 234 MNEIMG----SDHCPVVLEY 249


>gi|327278208|ref|XP_003223854.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like isoform 1
           [Anolis carolinensis]
          Length = 314

 Score =  172 bits (436), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 78/263 (29%), Positives = 123/263 (46%), Gaps = 16/263 (6%)

Query: 3   VVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQ----SLNYHI 57
            + V +WNV+ IRA +      W+ E NPDI+CLQETK  +K  P +          Y  
Sbjct: 58  TLKVTSWNVDGIRAWVKKKGVEWVSEENPDILCLQETKCAEKQLPADIRDLAEYPHKYWA 117

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
            +  ++ Y+GVA+LSK +P+E+   +  ++ D + R I A F        + +     G 
Sbjct: 118 CSEDKEGYSGVALLSKVKPLEVKYGIGEEEHDKEGRVITAEFP---SYFLVTSYVPNAGR 174

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
            +   +Y        R      + L   +PLI  GD N+  +  D  NP   + +A FT 
Sbjct: 175 GLVRLEYRQSWDVAFRSY---LKGLAARKPLILCGDLNVAHEEIDLKNPKGNKKNAGFTP 231

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
           E R  F KL   GF D  R  +    + Y+FW Y  ++ SKN G R+D+ ++S +    +
Sbjct: 232 EERAGFTKLLEEGFVDTFRHLYPDTAYAYTFWTYMMNARSKNVGWRLDYFVVSKDLQESI 291

Query: 237 HSARIDTKPRGWTKPSDHTPVIV 259
             ++I    R     SDH P+ +
Sbjct: 292 CDSKI----RSTALGSDHCPITL 310


>gi|284035454|ref|YP_003385384.1| exodeoxyribonuclease III Xth [Spirosoma linguale DSM 74]
 gi|283814747|gb|ADB36585.1| exodeoxyribonuclease III Xth [Spirosoma linguale DSM 74]
          Length = 254

 Score =  172 bits (435), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 70/263 (26%), Positives = 107/263 (40%), Gaps = 12/263 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60
           + + ++N+N IRA I   L  W+ +N  DI+C QE K           + L Y  H    
Sbjct: 1   MQLISYNINGIRAAIRNGLLDWLAQNQFDILCFQEVKATTDVVDLSVFEQLGYQYHWHAA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GVA  SK  P  +V        D + R +   F   T                 
Sbjct: 61  EKKGYSGVATFSKIAPTNVVLGCGLPVYDCEGRILRTDFGDLTL-----LNCYFPSGTTG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   K+ +++ F +F  +  +    +I  GDYNI     D ++P+  +N   F  E R
Sbjct: 116 EVRQGVKMEFLRDFYQFVQELRKERPKVIVVGDYNIAHNAIDIHDPVRNKNTTGFLPEER 175

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
                    G TD  R  H T   YS+W Y A + + NKG RID+  L+      +    
Sbjct: 176 AWMDSWFGSGMTDGFRYKHPTDVAYSWWSYRAGARTNNKGWRIDYASLTDNLRDRIIDCA 235

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263
           +           DH PV ++LD+
Sbjct: 236 MLPDAVHA----DHCPVCLNLDL 254


>gi|187735459|ref|YP_001877571.1| exodeoxyribonuclease III Xth [Akkermansia muciniphila ATCC BAA-835]
 gi|187425511|gb|ACD04790.1| exodeoxyribonuclease III Xth [Akkermansia muciniphila ATCC BAA-835]
          Length = 253

 Score =  172 bits (435), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 68/262 (25%), Positives = 109/262 (41%), Gaps = 13/262 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL-NYHIETCG 61
           + + +WNVN +RA +   +A  +    PD++CLQE K   +      + S  +       
Sbjct: 1   MKLVSWNVNGLRAVLGKGMADAVDALEPDVLCLQEIKARPEQVKDLWISSWPHQLWNPAE 60

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +  Y+GV ILS+ +P+     +   + D + R     F                 +    
Sbjct: 61  KAGYSGVLILSRVRPLSTSVGIGWPEHDREGRVCTMEFEGFYL-----VNCYTPNSQNEL 115

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            +   +  W   F  + +  L   +P++F GD N+  +  D   P      A F+ + R 
Sbjct: 116 VRLPYREQWDAAFREYVAG-LAETKPVVFCGDLNVAHEEIDIARPKENRFSAGFSDQERA 174

Query: 182 SFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            F  L   GFTD  RA H      YS+W Y A + ++N G RID+  +S    S +  A 
Sbjct: 175 GFTLLLEAGFTDTFRALHPEEPGWYSWWSYRAGARARNIGWRIDYFCVSNPLASRVKDAA 234

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I     G    SDH PV + +D
Sbjct: 235 IHPDVTG----SDHCPVSLEID 252


>gi|283458671|ref|YP_003363306.1| exonuclease III [Rothia mucilaginosa DY-18]
 gi|283134721|dbj|BAI65486.1| exonuclease III [Rothia mucilaginosa DY-18]
          Length = 291

 Score =  172 bits (435), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 65/279 (23%), Positives = 113/279 (40%), Gaps = 17/279 (6%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC- 60
           ++ VA+ NVN IRA    ++AAW+   + DI+CLQE +  D     E L    +HI    
Sbjct: 14  LLRVASVNVNGIRAAYKKDMAAWLASRDIDILCLQEVRAPDA-IVRELLDESQWHILHAE 72

Query: 61  ------------GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108
                        +++ N    + + QP+   +++  +  D   R++EA + +       
Sbjct: 73  AAAKGRAGVLVATRRTPNSAGEVLENQPVATRSNIGEEYFDDSGRWVEADYVLPNGKTLT 132

Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168
                 H   + + K DDK  +++R L    +  +  + ++  GD N+     D  N   
Sbjct: 133 VVSAYVHSGEVGTQKQDDKYRFLERMLVRMPELAKHSDHVLIVGDLNVGHTELDIKNWKA 192

Query: 169 WENDACFTLEVRQSFQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226
            +  A F  E R  F +          A          Y++W Y   ++  + G RID+ 
Sbjct: 193 NQKRAGFLPEERAYFDRFFGDIGYRDVARELAGQVPGPYTWWSYRGKAFDNDAGWRIDYH 252

Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           M +P        A +D       + SDH P++V   I E
Sbjct: 253 MATPALAESAVEAVVDRAASYDERFSDHAPLVVDYRIGE 291


>gi|213021237|ref|NP_001132943.1| DNA-(apurinic or apyrimidinic site) lyase [Sus scrofa]
 gi|210062866|gb|ACJ06403.1| APEX nuclease 1 [Sus scrofa]
          Length = 318

 Score =  172 bits (435), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 73/269 (27%), Positives = 125/269 (46%), Gaps = 17/269 (6%)

Query: 2   SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQ----SLNYH 56
           + + + +WNV+ +RA I      W+KE  PDI+CLQETK  +   P E  +       Y 
Sbjct: 60  ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELSGLPHQYW 119

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                ++ Y+GV +LS+  P+++   +  ++ D + R I A F      + +       G
Sbjct: 120 SAPSDKEGYSGVGLLSRQCPLKVSYGIGEEEHDQEGRVIVAEF---DAFVLVTAYVPNAG 176

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
             +   +Y  +     R      + L   +PL+  GD N+  +  D  NP   + +A FT
Sbjct: 177 RGLVRLEYRQRWDEAFRKF---LKGLASHKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 233

Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E +   + LQ +   D+ R  +    + Y+FW Y  ++ SKN G R+D+ +LS     
Sbjct: 234 PQERQGFGELLQAVPLADSFRHLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLP 293

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            L  ++I +K  G    SDH P+ + L +
Sbjct: 294 ALCDSKIRSKALG----SDHCPITLYLAL 318


>gi|6753086|ref|NP_033817.1| DNA-(apurinic or apyrimidinic site) lyase [Mus musculus]
 gi|113985|sp|P28352|APEX1_MOUSE RecName: Full=DNA-(apurinic or apyrimidinic site) lyase; AltName:
           Full=APEX nuclease; Short=APEN; AltName:
           Full=Apurinic-apyrimidinic endonuclease 1; Short=AP
           endonuclease 1; AltName: Full=REF-1; AltName: Full=Redox
           factor-1; Contains: RecName: Full=DNA-(apurinic or
           apyrimidinic site) lyase, mitochondrial
 gi|220337|dbj|BAA14382.1| APEX nuclease precursor [Mus musculus]
 gi|533108|gb|AAC13769.1| apurinic/apyrimidinic endonuclease [Mus musculus]
 gi|533329|dbj|BAA07270.1| APEX nuclease [Mus musculus]
 gi|12850573|dbj|BAB28774.1| unnamed protein product [Mus musculus]
 gi|30851442|gb|AAH52401.1| Apurinic/apyrimidinic endonuclease 1 [Mus musculus]
 gi|148688888|gb|EDL20835.1| apurinic/apyrimidinic endonuclease 1 [Mus musculus]
          Length = 317

 Score =  172 bits (435), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 73/269 (27%), Positives = 125/269 (46%), Gaps = 17/269 (6%)

Query: 2   SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN----YH 56
           + + + +WNV+ +RA I      W+KE  PDI+CLQETK  +   P E  +       Y 
Sbjct: 59  ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLTHQYW 118

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                ++ Y+GV +LS+  P+++   +  ++ D + R I A F      + +       G
Sbjct: 119 SAPSDKEGYSGVGLLSRQCPLKVSYGIGEEEHDQEGRVIVAEFE---SFVLVTAYVPNAG 175

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
             +   +Y  +     R      + L   +PL+  GD N+  +  D  NP   + +A FT
Sbjct: 176 RGLVRLEYRQRWDEAFRKF---LKDLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 232

Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E +   + LQ +   D+ R  +    + Y+FW Y  ++ SKN G R+D+ +LS     
Sbjct: 233 PQERQGFGELLQAVPLADSFRHLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLP 292

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            L  ++I +K  G    SDH P+ + L +
Sbjct: 293 ALCDSKIRSKALG----SDHCPITLYLAL 317


>gi|126277963|ref|XP_001379263.1| PREDICTED: similar to APEX nuclease (multifunctional DNA repair
           enzyme) 1 [Monodelphis domestica]
          Length = 385

 Score =  172 bits (435), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 76/269 (28%), Positives = 126/269 (46%), Gaps = 17/269 (6%)

Query: 2   SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFE--TLQSLNYHIE 58
           S + + +WNV+ +RA I      W+KE  PDI+CLQETK  +   P E   L  L Y   
Sbjct: 127 STLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSESKLPPELQDLPGLTYQYW 186

Query: 59  TCGQKS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
           +       Y+GV +LS+  P+ +   +  ++ D + R I A F      + +       G
Sbjct: 187 SSPSDKEGYSGVGLLSRQCPLSVTYGIGEEEHDQEGRVIVAEFEAF---VLVTAYVPNAG 243

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
             +   +Y  +     R      + L  ++PL+  GD N+  +  D  NP   + +A FT
Sbjct: 244 RGLVRLEYRQRWDEAFRKF---LKGLSAKKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 300

Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E +   + LQ +  TD+ R  +    + Y+FW Y  ++ +KN G R+D+ +LS     
Sbjct: 301 PQERQGFGELLQAVPLTDSFRHLYPEAAYAYTFWTYMMNARAKNVGWRLDYFLLSQALLP 360

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            L  ++I +K  G    SDH P+ + L +
Sbjct: 361 ALCDSKIRSKALG----SDHCPITLLLAL 385


>gi|260574458|ref|ZP_05842462.1| exodeoxyribonuclease III Xth [Rhodobacter sp. SW2]
 gi|259023354|gb|EEW26646.1| exodeoxyribonuclease III Xth [Rhodobacter sp. SW2]
          Length = 262

 Score =  172 bits (435), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 88/264 (33%), Positives = 122/264 (46%), Gaps = 10/264 (3%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQK 63
           T+ATWN+NS+R R   +A  + E  PDI+CLQE K+     P E  Q+L Y ++   GQK
Sbjct: 4   TLATWNINSVRLREGLVARLMAEEAPDILCLQECKSPVDKIPLEQFQALGYRYMVARGQK 63

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            YNGVAILSK   ++            +              + I N Y+P G  I    
Sbjct: 64  GYNGVAILSKLPIMDAGDRDFASMGHARHVAARLENG-----VTIHNCYVPAGGDIPDRD 118

Query: 124 YDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180
            ++K      FL         E+P      GD NI P+  D ++          T  EV 
Sbjct: 119 QNEKFGQKLDFLTEMRDWCRWEKPDRAILVGDLNIAPREDDVWSHKALLKIVSHTPIEVD 178

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLLHSA 239
                ++   + D  RA      LYS+W Y A  W + +KG R+DHI  +P+  S  HS+
Sbjct: 179 HLTAVMEAGSWVDVTRADIPEGPLYSWWSYRAAEWGAADKGRRLDHIWATPDIASAAHSS 238

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
           RI    RGW +PSDH PV  + D+
Sbjct: 239 RILRAARGWQQPSDHAPVFATFDL 262


>gi|50843350|ref|YP_056577.1| exodeoxyribonuclease III [Propionibacterium acnes KPA171202]
 gi|50840952|gb|AAT83619.1| exodeoxyribonuclease III [Propionibacterium acnes KPA171202]
 gi|315106020|gb|EFT77996.1| exodeoxyribonuclease III [Propionibacterium acnes HL030PA1]
          Length = 297

 Score =  172 bits (435), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 62/297 (20%), Positives = 106/297 (35%), Gaps = 37/297 (12%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + +A++N+N IRA +    + W++  + D+I LQE +    + P       +        
Sbjct: 1   MRIASFNINGIRAALKRGFSEWMEARDCDVIGLQEVRCRPADLPEGAFGDRHVSWAPGSL 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDL------------------------DVQARFIEAT 98
              NGVA+L++  P E+ +      +                                  
Sbjct: 61  AGRNGVALLTRTAPAEVRSWGTHLVMAPGQAPTPAQALTGNTDGLPTELLPFADEGRYIE 120

Query: 99  FTINTQTLRIGNLYLPHGNPITS----------TKYDDKISWIKRFLRFASQRLELEEPL 148
             +    L +  LYLP G                K      +    +R   +        
Sbjct: 121 VDLADTPLTVACLYLPKGATPDPANEKTIAKQDRKMAFLTGFRDHLVRRRQECTTQGRHF 180

Query: 149 IFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL--QNMGFTDAIRATHDTHHLYS 206
           +  GD+NI  +  D  N    + +  F  E RQ F  +   +           DT+  YS
Sbjct: 181 LVMGDFNIAHENADLKNWKANQRNEGFLPEERQWFDTILSPDTLIDVVRAQHPDTNGPYS 240

Query: 207 FWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +W +   ++  + G RID+ + SPE  S   +A ID  P    + SDH  V+V  D+
Sbjct: 241 WWSWRGKAFVNDAGWRIDYHLASPELASKAITAEIDRDPSYSERTSDHAAVVVDYDL 297


>gi|85717081|ref|ZP_01048042.1| exodeoxyribonuclease III [Nitrobacter sp. Nb-311A]
 gi|85696119|gb|EAQ34016.1| exodeoxyribonuclease III [Nitrobacter sp. Nb-311A]
          Length = 257

 Score =  172 bits (435), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 83/258 (32%), Positives = 128/258 (49%), Gaps = 3/258 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+N++++  R+ NL  W+K + PD++CLQ+ K E+++FP   L+   Y      QK
Sbjct: 1   MKIATFNIDNVNTRLPNLLEWLKHSKPDVVCLQDLKCEERDFPRAALREAGYSAVWESQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           S NGVAILS+     +            +             L I  LYLP GNP    +
Sbjct: 61  SLNGVAILSRRSHPIVTRRRL---PGDPSDREARYIEAAVGGLLIACLYLPKGNPQPGPE 117

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +D K+SW+ R  + A++    + P +  G+YN+ P   D  +   W NDA      R++F
Sbjct: 118 FDYKMSWLSRLTKHAARLQGQDHPALLVGNYNVAPTDLDMCSTESWTNDARVQQTQRKAF 177

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             L   G+TDA+R  +    +Y+FW Y  D + K+   R+DH +LS    S L  A +D 
Sbjct: 178 ASLLANGWTDALRDVYRHERVYTFWTYGRDRYEKDHAFRLDHFLLSKAVASRLIKAGVDG 237

Query: 244 KPRGWTKPSDHTPVIVSL 261
             R     SDH P  + L
Sbjct: 238 DGRSEKNASDHAPAWIKL 255


>gi|6980832|pdb|1DEW|A Chain A, Crystal Structure Of Human Ape1 Bound To Abasic Dna
 gi|6980833|pdb|1DEW|B Chain B, Crystal Structure Of Human Ape1 Bound To Abasic Dna
          Length = 279

 Score =  172 bits (435), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 73/269 (27%), Positives = 125/269 (46%), Gaps = 17/269 (6%)

Query: 2   SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN----YH 56
           + + + +WNV+ +RA I      W+KE  PDI+CLQETK  +   P E  +       Y 
Sbjct: 21  ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQYW 80

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                ++ Y+GV +LS+  P+++   +  ++ D + R I A F      + +       G
Sbjct: 81  SAPSDKEGYSGVGLLSRQCPLKVSYGIGDEEHDQEGRVIVAEF---DSFVLVTAYVPNAG 137

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
             +   +Y  +     R      + L   +PL+  GD N+  +  D  NP   + +A FT
Sbjct: 138 RGLVRLEYRQRWDEAFRKF---LKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 194

Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E +   + LQ +   D+ R  +    + Y+FW Y  ++ SKN G R+D+ +LS     
Sbjct: 195 PQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLP 254

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            L  ++I +K  G    SDH P+ + L +
Sbjct: 255 ALCDSKIRSKALG----SDHCPITLYLAL 279


>gi|296214367|ref|XP_002753758.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like isoform 1
           [Callithrix jacchus]
 gi|296214369|ref|XP_002753759.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like isoform 2
           [Callithrix jacchus]
          Length = 318

 Score =  172 bits (435), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 73/269 (27%), Positives = 125/269 (46%), Gaps = 17/269 (6%)

Query: 2   SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN----YH 56
           + + + +WNV+ +RA I      W+KE  PDI+CLQETK  +   P E  +       Y 
Sbjct: 60  ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLPHQYW 119

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                ++ Y+GV +LS+  P+++   +  ++ D + R I A F      + +       G
Sbjct: 120 SAPSDKEGYSGVGLLSRQCPLKVSYGIGEEEHDQEGRVIVAEF---DSFVLVTAYVPNAG 176

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
             +   +Y  +     R      + L   +PL+  GD N+  +  D  NP   + +A FT
Sbjct: 177 RGLVRLEYRQRWDEAFRKF---LKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 233

Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E +   + LQ +   D+ R  +    + Y+FW Y  ++ SKN G R+D+ +LS     
Sbjct: 234 PQERQGFGELLQAVPLADSFRHLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLP 293

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            L  ++I +K  G    SDH P+ + L +
Sbjct: 294 ALCDSKIRSKALG----SDHCPITLYLAL 318


>gi|325474290|gb|EGC77478.1| exodeoxyribonuclease III [Treponema denticola F0402]
          Length = 256

 Score =  172 bits (435), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 61/259 (23%), Positives = 104/259 (40%), Gaps = 17/259 (6%)

Query: 6   VATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS------LNYHIE 58
           + +WNVN IRA        W+   NPD++C+QETK        E  ++         +  
Sbjct: 4   IISWNVNGIRAVEKKGFLDWLNTENPDVLCVQETKAAKAQLSKELTEADLPNGKYFAYWA 63

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
           +  +  Y+G AI +K +P+++ T    +  D     +     ++              + 
Sbjct: 64  SAKKAGYSGTAIFTKKEPLQVRTMGLKEFDDEGRVLVADFDKVS------IISAYFPNSQ 117

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
               + D K+ +    L F     E    +I  GD+NI  +P D  NP   E +  +  E
Sbjct: 118 DGGARLDYKLDFCAAILEFCDSVQEEGNNVILCGDFNIAHKPIDLANPKSNEKNPGYLPE 177

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
            R    +  + G+TD  R        Y++W Y   +  KN G R+D+  ++    + +  
Sbjct: 178 ERAWMDEFTSSGYTDTFRHFCQEPAKYTWWSYRFRAREKNIGWRLDYHCVNDSFLAKIKE 237

Query: 239 ARIDTKPRGWTKPSDHTPV 257
           + I     G    SDH PV
Sbjct: 238 SIILDGVMG----SDHCPV 252


>gi|257076437|ref|ZP_05570798.1| exodeoxyribonuclease III [Ferroplasma acidarmanus fer1]
          Length = 252

 Score =  172 bits (435), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 72/261 (27%), Positives = 121/261 (46%), Gaps = 12/261 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQ-SLNYHIETCG 61
           + + +WNVN IRA +   +   ++  NPDII LQE K +  + P E        ++    
Sbjct: 1   MKILSWNVNGIRAAVKNGIIKTLENENPDIILLQEAKADKMDIPEELHHTGYKIYVNPAD 60

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G   ++K +P+   T    ++ DV+ R     +        + N Y P+      
Sbjct: 61  KKGYSGTMAMAKQEPLSYTTGTGENNKDVEGRIQTLEYD----NFYLINSYFPNSQH-GL 115

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
           T+ D KI    R +     +L+ ++P+I  GD+N+  +  D   P   E +A FT+E R 
Sbjct: 116 TRLDYKI-QFNREILEYMDKLKAKKPVIITGDFNVAHEEIDIARPKGNEKNAGFTIEERD 174

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           S  ++ + G+ D  R  H     YS+W Y  ++  KN G RID+ ++S      +  + I
Sbjct: 175 SMTEILSHGYVDTYRYFHKEPGHYSWWSYRFNAREKNIGWRIDYFLVSDNFIGKVEDSLI 234

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
                G    SDH P+ + L 
Sbjct: 235 LENVTG----SDHAPLELILK 251


>gi|149692696|ref|XP_001505181.1| PREDICTED: similar to APEX nuclease [Equus caballus]
          Length = 318

 Score =  172 bits (435), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 73/269 (27%), Positives = 125/269 (46%), Gaps = 17/269 (6%)

Query: 2   SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN----YH 56
           + + + +WNV+ +RA I      W+KE  PDI+CLQETK  +   P E  +       Y 
Sbjct: 60  ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQYW 119

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                ++ Y+GV +LS+  P+++   +  ++ D + R I A F      + +       G
Sbjct: 120 SAPSDKEGYSGVGLLSRQCPLKVSYGIGEEEHDQEGRVIVAEF---DAFVLVTAYVPNAG 176

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
             +   +Y  +     R      + L   +PL+  GD N+  +  D  NP   + +A FT
Sbjct: 177 RGLVRLEYRQRWDEAFRKF---LKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 233

Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E +   + LQ +   D+ R  +    + Y+FW Y  ++ SKN G R+D+ +LS     
Sbjct: 234 PQERQGFGELLQAVPLADSFRHLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLP 293

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            L  ++I +K  G    SDH P+ + L +
Sbjct: 294 ALCDSKIRSKALG----SDHCPITLYLAL 318


>gi|255513574|gb|EET89840.1| exodeoxyribonuclease III Xth [Candidatus Micrarchaeum acidiphilum
           ARMAN-2]
          Length = 249

 Score =  172 bits (435), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 61/259 (23%), Positives = 114/259 (44%), Gaps = 13/259 (5%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +++ +WNVN IRA   ++   ++   PDII  QE K  +++ P + L+SL Y +      
Sbjct: 3   ISLISWNVNGIRAAEKSVVGLLESEKPDIIAFQEIKAGEESIP-KGLKSLGYAMYVNSAA 61

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
                  +   +   I      +D + + + +E           +   +      ++  +
Sbjct: 62  RKGYSGTMVMTKIKPISYSTEFEDDEGRVQRLEFDDYYF-----VNAYFPNSRRDLSRLE 116

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K     R       RLE ++P++  GD+N+  +  D   P     +A FT E R+  
Sbjct: 117 FKIKF---DRDFEKYIGRLEAKKPVLVCGDFNVAHKDIDIARPAENRGNAGFTDEEREWM 173

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            +    G  D  R  +     Y++W Y++ +  +N G RID+ + S +  S + +A I +
Sbjct: 174 TEFLGGGRLDTFRIFNKGAEHYTWWAYFSHARDRNIGWRIDYFVASKQMRSRIVNAGILS 233

Query: 244 KPRGWTKPSDHTPVIVSLD 262
           + RG    SDH P+ V+L 
Sbjct: 234 EIRG----SDHAPIYVTLK 248


>gi|284031341|ref|YP_003381272.1| exodeoxyribonuclease III Xth [Kribbella flavida DSM 17836]
 gi|283810634|gb|ADB32473.1| exodeoxyribonuclease III Xth [Kribbella flavida DSM 17836]
          Length = 267

 Score =  172 bits (435), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 63/267 (23%), Positives = 113/267 (42%), Gaps = 6/267 (2%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL---NYHIE 58
           ++ VAT NVN +RA     +A W++  +P+++ LQE +  D+             +    
Sbjct: 1   MLKVATVNVNGVRAAYRRGMAPWLERTDPELLLLQEVRATDEVLRDHLGGDWQLVHAEPV 60

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-TQTLRIGNLYLPHGN 117
           T G K   GVA+ S+       T +  +      R++EA   ++   TL   + Y+  G 
Sbjct: 61  TEGSKGRAGVAVASRRPIKAERTDIGPERFTGCGRWVEADVVLDDGSTLTAVSTYVFTGE 120

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
             T  + ++K +++       ++       ++  GD NI  +  D          + F  
Sbjct: 121 FETPPRQEEKYAFLDAITVRLTELRADGRHVLMCGDLNIAHREVDLKAWKANRKKSGFLP 180

Query: 178 EVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
           E R    +L   G+ D  R    D    YS+W +   ++  + G RID+ + SPE  +  
Sbjct: 181 EERAWLDRLFEAGWVDLGRRFGGDGPGPYSWWSWRGKAFDNDAGWRIDYQIASPELAAAA 240

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263
               +D  P    + SDH PV+ + +I
Sbjct: 241 TGCTVDRAPTYAERWSDHAPVVATYEI 267


>gi|327333158|gb|EGE74885.1| exodeoxyribonuclease III [Propionibacterium acnes HL097PA1]
          Length = 297

 Score =  171 bits (434), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 62/297 (20%), Positives = 106/297 (35%), Gaps = 37/297 (12%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + +A++N+N IRA +    + W++  + D+I LQE +    + P       +        
Sbjct: 1   MRIASFNINGIRAALKRGFSEWMEARDCDVIGLQEVRCRPADLPEGAFGDRHVSWAPGSL 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDL------------------------DVQARFIEAT 98
              NGVA+L++  P E+ +      +                                  
Sbjct: 61  AGRNGVALLTRTAPAEVRSWGTHLVMAPGQAPTPAQALTGNTDGLPTELLPFADEGRYIE 120

Query: 99  FTINTQTLRIGNLYLPHGNPITS----------TKYDDKISWIKRFLRFASQRLELEEPL 148
             +    L +  LYLP G                K      +    +R   +        
Sbjct: 121 VDLADTPLTVACLYLPKGATPDPANEKTIAKQDRKMAFLTGFRDHLVRRRQECTAQGRHF 180

Query: 149 IFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL--QNMGFTDAIRATHDTHHLYS 206
           +  GD+NI  +  D  N    + +  F  E RQ F  +   +           DT+  YS
Sbjct: 181 LVMGDFNIAHENADLKNWKANQRNEGFLPEERQWFDTILSPDTLIDVVRAQHPDTNGPYS 240

Query: 207 FWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +W +   ++  + G RID+ + SPE  S   +A ID  P    + SDH  V+V  D+
Sbjct: 241 WWSWRGKAFVNDAGWRIDYHLASPELASKAITAEIDRDPSYSERTSDHAAVVVDYDL 297


>gi|310817228|ref|YP_003965192.1| exodeoxyribonuclease III, putative [Ketogulonicigenium vulgare Y25]
 gi|308755963|gb|ADO43892.1| exodeoxyribonuclease III, putative [Ketogulonicigenium vulgare Y25]
          Length = 262

 Score =  171 bits (434), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 83/266 (31%), Positives = 121/266 (45%), Gaps = 10/266 (3%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCG 61
             T+ATWN+NS+R R   +A  ++E  PD++CLQE K+  +  P E  ++L Y ++   G
Sbjct: 2   TFTLATWNINSVRLRAELVARLLREELPDVLCLQECKSPVELIPTEIFRALGYPYMIARG 61

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           QK YNGVAILS+    E+     G                    + I N Y+P G  I  
Sbjct: 62  QKGYNGVAILSRLPMREV-----GAHDFADLGHARHIAGQLDNGVTIHNFYVPAGGDIPD 116

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL-E 178
            + + K      +L         E+P      GD NI P+  D +N          T  E
Sbjct: 117 REQNIKFGQKLDYLTQMRDHFHGEKPQKAILVGDLNIAPREDDVWNHKALLKIVSHTPIE 176

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLH 237
           V      + +  + D  RA      LYS+W Y +  W   +KG R+DHI  + +  +  H
Sbjct: 177 VDHLGAAMDSGDWVDITRANIPEGRLYSWWSYRSPDWDAADKGRRLDHIWATRDIAAAGH 236

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263
           S+R+    RGW  PSDH PV  + D+
Sbjct: 237 SSRVLRPARGWEGPSDHAPVFATFDL 262


>gi|323524445|ref|YP_004226598.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1001]
 gi|323381447|gb|ADX53538.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1001]
          Length = 259

 Score =  171 bits (434), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 63/264 (23%), Positives = 112/264 (42%), Gaps = 14/264 (5%)

Query: 3   VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59
           ++ V T N+N IR A       W  E N D++C+QE K    +   E +   ++  + + 
Sbjct: 1   MLRVITANLNGIRSAAKKGFFDWFGEQNADVLCVQEIKCSQDDMTPEFMAPHDFTGYFQH 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G  + ++++P E+V     ++ D + R++E  F      L + ++Y+P G+  
Sbjct: 61  AVKKGYSGAGVYTRHEPDEVVIGFGSEEFDPEGRYVELRFG----KLSVVSVYVPSGSSG 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +                  L  E  +I  GD NI+ +  D  N    + ++    E 
Sbjct: 117 EERQQA--KYRFMDEFMPHLAELAREREVIVCGDVNIVHKEIDIKNWKSNQKNSGCLPEE 174

Query: 180 RQSFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R    KL +  G+ D  R        Y++W     +++KN G RID+ + +P   S    
Sbjct: 175 RAWLTKLFDEVGYVDVFRTLDQRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGIASTAKR 234

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
             +        K SDH P+ V  D
Sbjct: 235 TEVFRDI----KFSDHAPLTVDYD 254


>gi|223278400|ref|NP_788782.2| DNA-(apurinic or apyrimidinic site) lyase [Bos taurus]
 gi|113912167|gb|AAI22611.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Bos taurus]
 gi|296483354|gb|DAA25469.1| DNA-(apurinic or apyrimidinic site) lyase [Bos taurus]
          Length = 318

 Score =  171 bits (434), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 73/269 (27%), Positives = 126/269 (46%), Gaps = 17/269 (6%)

Query: 2   SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN----YH 56
           + + + +WNV+ +RA I      W+KE  PDI+CLQETK  +   P E  +       Y 
Sbjct: 60  ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPVELQELSGLSHQYW 119

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                ++ Y+GV +LS+  P+++   +  ++ D + R I A +      + +       G
Sbjct: 120 SAPSDKEGYSGVGLLSRQCPLKVSYGIGEEEHDQEGRVIVAEY---DAFVLVTAYVPNAG 176

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
             +   +Y  +     R      + L   +PL+  GD N+  +  D  NP   + +A FT
Sbjct: 177 RGLVRLEYRQRWDEAFRKF---LKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 233

Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E +   + LQ +  TD+ R  +    + Y+FW Y  ++ SKN G R+D+ +LS     
Sbjct: 234 PQERQGFGELLQAVPLTDSFRHLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSQSLLP 293

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            L  ++I +K  G    SDH P+ + L +
Sbjct: 294 ALCDSKIRSKALG----SDHCPITLYLAL 318


>gi|328782712|ref|XP_623551.2| PREDICTED: recombination repair protein 1 [Apis mellifera]
          Length = 346

 Score =  171 bits (434), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 75/263 (28%), Positives = 125/263 (47%), Gaps = 13/263 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFET-LQSLNYHIETCG 61
           + +++WNV+ IRA I  N   +I + + DI+ LQETK +    P E  L   +Y+     
Sbjct: 94  LKISSWNVSGIRAVIKKNGIKYIAKEDADIVALQETKCDSNKLPEEIKLNGYHYYFLESK 153

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +  Y GVA+ +K +PI++   L   + D + R I A +        + N+Y+P+      
Sbjct: 154 KSGYCGVALFTKEKPIDVKYGLNNSEFDNEGRLITAEYL----NFYLINVYVPNAGQKLV 209

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
           T             +   + L+ ++P+I  GD N+  +  D  NP     +A FT+E R 
Sbjct: 210 TLPKRLKWN--EIFKTYVRNLDEKKPVIICGDMNVAHKEIDLRNPKTNIKNAGFTIEERD 267

Query: 182 SFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
                   GF D  RA +      Y+FW Y+A++ SKN G R+D+ ++S      +    
Sbjct: 268 GMTDFLATGFVDTFRALYPDKTDAYTFWSYFANARSKNIGWRLDYFLVSERIKDNVCDNV 327

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263
           I  K  G    SDH P+++ ++I
Sbjct: 328 IRDKVYG----SDHCPIVLYINI 346


>gi|327278210|ref|XP_003223855.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like isoform 2
           [Anolis carolinensis]
          Length = 306

 Score =  171 bits (434), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 78/263 (29%), Positives = 123/263 (46%), Gaps = 16/263 (6%)

Query: 3   VVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQ----SLNYHI 57
            + V +WNV+ IRA +      W+ E NPDI+CLQETK  +K  P +          Y  
Sbjct: 50  TLKVTSWNVDGIRAWVKKKGVEWVSEENPDILCLQETKCAEKQLPADIRDLAEYPHKYWA 109

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
            +  ++ Y+GVA+LSK +P+E+   +  ++ D + R I A F        + +     G 
Sbjct: 110 CSEDKEGYSGVALLSKVKPLEVKYGIGEEEHDKEGRVITAEFP---SYFLVTSYVPNAGR 166

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
            +   +Y        R      + L   +PLI  GD N+  +  D  NP   + +A FT 
Sbjct: 167 GLVRLEYRQSWDVAFRSY---LKGLAARKPLILCGDLNVAHEEIDLKNPKGNKKNAGFTP 223

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
           E R  F KL   GF D  R  +    + Y+FW Y  ++ SKN G R+D+ ++S +    +
Sbjct: 224 EERAGFTKLLEEGFVDTFRHLYPDTAYAYTFWTYMMNARSKNVGWRLDYFVVSKDLQESI 283

Query: 237 HSARIDTKPRGWTKPSDHTPVIV 259
             ++I    R     SDH P+ +
Sbjct: 284 CDSKI----RSTALGSDHCPITL 302


>gi|261749295|ref|YP_003256980.1| exodeoxyribonuclease III [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
 gi|261497387|gb|ACX83837.1| exodeoxyribonuclease III [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
          Length = 256

 Score =  171 bits (434), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 71/264 (26%), Positives = 125/264 (47%), Gaps = 13/264 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + ++N+N IR+ I   L  WIK   PD++CLQE K   +         L Y+      
Sbjct: 1   MKIISYNINGIRSGINKGLLHWIKSYQPDVLCLQEIKASKEQIKTSLFDHLGYYHYWFPS 60

Query: 62  --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GV IL K +P  I   +  + +D + R +          + + +LY+P G  +
Sbjct: 61  TKRKGYSGVGILCKEKPHHIEYGIGIESIDTEGRVLRIDLK----KISVISLYIPSGKHL 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
            +   + K  +++ F  +  +  +  + L+  GDYNI     D ++PI     + F  E 
Sbjct: 117 KNR-LNFKFYFMENFFSYIKKIQKKLKDLVICGDYNICHHEIDIHDPIRNRKISGFLPEE 175

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R+      N+GF D+ R      + YS+W YY+++   NKG RID+ M+S      ++ A
Sbjct: 176 RKWMSNFLNLGFIDSFRNYVKEANHYSWWSYYSNAKKNNKGWRIDYAMVSRSLKKKMNKA 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
            +  +       SDH P ++ ++I
Sbjct: 236 YLLPEIPY----SDHCPTVLEIEI 255


>gi|254292391|ref|YP_003058414.1| exodeoxyribonuclease III Xth [Hirschia baltica ATCC 49814]
 gi|254040922|gb|ACT57717.1| exodeoxyribonuclease III Xth [Hirschia baltica ATCC 49814]
          Length = 269

 Score =  171 bits (434), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 78/268 (29%), Positives = 121/268 (45%), Gaps = 8/268 (2%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIET 59
           M+ + + +WN+NS+R R+  +A +I    PDI+CLQE K  +  +P +  +     ++E 
Sbjct: 1   MTDLRLTSWNINSVRLRMPRVADFIAREKPDILCLQEIKCREAEYPLKAFEEAGLPYVEI 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            GQK  +GVAI S+Y    + T       +           +    L +        +P 
Sbjct: 61  AGQKGMHGVAIGSRYPLERLET-PDFCIREEARAISVRVAGVEVHNLYVPAG-GDEPDPT 118

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
            + K+  K+ ++ R  +  S R    +PLI  GD N+ P+ HD ++          T   
Sbjct: 119 INDKFAHKLEFLARMEKTYSARSNDSQPLIVVGDINVAPREHDVWSHKQLLKVVSHTPIE 178

Query: 180 RQSFQK--LQNMGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLL 236
            Q+  +   +      A     D   LYS+W Y A  W K N+G R+DHI  +  AT L 
Sbjct: 179 TQAVDRILKEGGFADIARVKHEDKEKLYSWWSYRAKDWEKSNRGRRLDHIWANRAATPLT 238

Query: 237 --HSARIDTKPRGWTKPSDHTPVIVSLD 262
              S  I    RG  KPSDH PV ++L 
Sbjct: 239 DPASYEIHKDDRGGEKPSDHAPVTINLK 266


>gi|319954545|ref|YP_004165812.1| exodeoxyribonuclease iii xth [Cellulophaga algicola DSM 14237]
 gi|319423205|gb|ADV50314.1| exodeoxyribonuclease III Xth [Cellulophaga algicola DSM 14237]
          Length = 254

 Score =  171 bits (434), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 71/264 (26%), Positives = 113/264 (42%), Gaps = 14/264 (5%)

Query: 4   VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFP--FETLQSLNYHIETC 60
           + + +WNVN IRA +       +K   PDI+CLQETK +D       E+L + + +  + 
Sbjct: 1   MHIVSWNVNGIRAAVKKDFFEAVKTMAPDILCLQETKAQDSEVAKALESLSNFSLNSNSA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+G AILSK  PI    ++  +  D + R +   +        +       G  + 
Sbjct: 61  DKKGYSGTAILSKQAPISATPNMGIEVHDTEGRILCTEY---DSFYLVNVYVPNSGQKLD 117

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND-ACFTLEV 179
             +Y  +     +      + LE ++P+I  GD+N+  Q  D  N     N  A +T   
Sbjct: 118 RLEYRQQW---DKDFLAYLKNLEKKKPVIACGDFNVAHQAIDLKNDKANYNKTAGYTQIE 174

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
                      F D+ RA H     Y+FW Y   S  +N G RID+ ++S      +   
Sbjct: 175 IDGMDNFIANDFVDSFRALHPDEVAYTFWSYRFKSRERNTGWRIDYFLVSKAIADKIKKV 234

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
            I     G    SDH P+ ++L I
Sbjct: 235 TIYADIMG----SDHCPIGITLSI 254


>gi|45657327|ref|YP_001413.1| exodeoxyribonuclease [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|294828126|ref|NP_712697.2| exodeoxyribonuclease [Leptospira interrogans serovar Lai str.
           56601]
 gi|45600565|gb|AAS70050.1| exodeoxyribonuclease [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|293385973|gb|AAN49715.2| exodeoxyribonuclease [Leptospira interrogans serovar Lai str.
           56601]
          Length = 254

 Score =  171 bits (434), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 66/263 (25%), Positives = 109/263 (41%), Gaps = 12/263 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETC 60
           +   + N N IR+ +   LA +I+   PD IC QETK      P    +   Y     + 
Sbjct: 1   MKFISLNCNGIRSSLEKGLADYIRNTKPDFICFQETKANQDQVPPSLWEEGGYTPVFHSA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GVA+L K  P +I   +     D + R I   +                     
Sbjct: 61  EKKGYSGVAVLYKKPPEKITIGIGDPFFDKEGRSIYLEYPNFALW-----NLYFPSGTTG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   K+ ++  F + +S+R + +  +I  GD NI   P D ++P      + F  E R
Sbjct: 116 DIRQAAKMKFLDLFQKESSKRRKKQPNIIVCGDVNIAHTPQDIHDPKGNAKSSGFLPEER 175

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           +   +  N G+ D  R  +     YS+W + A + +KNKG RID+  ++ E    + S  
Sbjct: 176 EWLSEFLNKGWVDTFRYLYPDKQEYSWWTFRAGARAKNKGWRIDYFFVTEELKKNVKSHS 235

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263
           I          SDH P+   + +
Sbjct: 236 IFRD----KPFSDHAPLEFEIKL 254


>gi|260062521|ref|YP_003195601.1| exonuclease III [Robiginitalea biformata HTCC2501]
 gi|88784086|gb|EAR15256.1| exonuclease III [Robiginitalea biformata HTCC2501]
          Length = 254

 Score =  171 bits (434), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 65/263 (24%), Positives = 104/263 (39%), Gaps = 14/263 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60
           + + +WNVN IRA      A  I++ +PD++CLQE K + +       Q   Y  H+   
Sbjct: 1   MKIISWNVNGIRAISGKGFAGHIEDLDPDVLCLQEIKADTEIVEEIAGQLPGYAVHVHPA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+G A+L K     +      D L  + R + A          +       G  + 
Sbjct: 61  EKKGYSGTALLLKNAEAGVDRGPETDLLQGEGRILRADLGDFN---LVNTYVPNSGANLK 117

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND-ACFTLEV 179
              + ++              L   +PL+  GD N+  +P D  N     N  A +T   
Sbjct: 118 RLDFREEW---DAAFLEYLNGLRDHKPLVLCGDLNVAHRPIDLKNDKANYNKTAGYTQRE 174

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
                +L   G  D  R  H     Y++W Y   +  +N G R+D+ ++SPE    +   
Sbjct: 175 IDGMDRLHQSGLIDIFRKRHPDEVAYTYWSYRFGARKRNVGWRLDYFLISPELEGRVAGT 234

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
            I     G    SDH P+ + LD
Sbjct: 235 PIYHNIEG----SDHCPIGLELD 253


>gi|297587792|ref|ZP_06946436.1| exodeoxyribonuclease III [Finegoldia magna ATCC 53516]
 gi|302380031|ref|ZP_07268510.1| exodeoxyribonuclease III [Finegoldia magna ACS-171-V-Col3]
 gi|297574481|gb|EFH93201.1| exodeoxyribonuclease III [Finegoldia magna ATCC 53516]
 gi|302312257|gb|EFK94259.1| exodeoxyribonuclease III [Finegoldia magna ACS-171-V-Col3]
          Length = 253

 Score =  171 bits (434), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 64/262 (24%), Positives = 104/262 (39%), Gaps = 13/262 (4%)

Query: 4   VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFET-LQSLNYHIETCG 61
           + + +WNVN  RA             N DI CLQE K ++     E  ++  + +  +  
Sbjct: 1   MKLISWNVNGYRAVWKKGFKEAFDSLNADIFCLQEIKMKENQMTDEMEIEGYHRYSYSAN 60

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +  Y+G  + +K +PI +   +  D+ D + R I   +        +          +  
Sbjct: 61  KAGYSGTLVYTKTEPIGVSFGIGIDEHDTEGRVITCEYE---DFFLVNVYTPNSKQKLER 117

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
             Y       +         L   +P+I  GD N+     D  NP      A FT E R 
Sbjct: 118 LDYR---MVWEDEFHNYLNILRDRKPVIVCGDLNVAHNEIDLKNPQSNRRSAGFTDEERN 174

Query: 182 SFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
               L N G+ D  R  +      YS+W Y+A +  +N G RID+ ++S +    L  A+
Sbjct: 175 KMSLLLNDGYIDTFRYFYPDKTDEYSYWSYFAKARERNAGWRIDYFIVSDDLKDNLVDAK 234

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I     G    SDH PV + ++
Sbjct: 235 IHQSIMG----SDHCPVELEIN 252


>gi|311900422|dbj|BAJ32830.1| putative exodeoxyribonuclease [Kitasatospora setae KM-6054]
          Length = 272

 Score =  171 bits (434), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 60/264 (22%), Positives = 96/264 (36%), Gaps = 7/264 (2%)

Query: 6   VATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ-- 62
           V T NVN IRA        WI     +++CLQE + E   F     +   +H        
Sbjct: 5   VTTANVNGIRAAAKKGFLEWIDATESEVVCLQEVRAETDQFADVLARLDGWHAVWAPAAA 64

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K   GVA+LS+  P          + DV  R+ E      T    +       G      
Sbjct: 65  KGRAGVAVLSRRAPEATRIGFGSAEFDVSGRYAELDLPGLTVA-SLYLPSGEVGTDRQDE 123

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           K      ++       ++       ++  GD+NI  +  D  N    +  A F  E R  
Sbjct: 124 KERFMAEFLVHLGELRARAAADGREVLVCGDWNIAHREADLRNWKANQKKAGFLPEERAW 183

Query: 183 FQKLQNMGFTDAIRATHDT---HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
             ++ +      +   H        YS+W Y   ++  + G RID+ M +P   +   +A
Sbjct: 184 LSRVLDEHGYVDVLRQHHADVAEGPYSWWSYRGRAFDNDAGWRIDYQMATPGLAARCTAA 243

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
           R++       + SDH PV    D+
Sbjct: 244 RVERAATHAERWSDHAPVTAVFDL 267


>gi|149914506|ref|ZP_01903036.1| exodeoxyribonuclease III [Roseobacter sp. AzwK-3b]
 gi|149811299|gb|EDM71134.1| exodeoxyribonuclease III [Roseobacter sp. AzwK-3b]
          Length = 262

 Score =  171 bits (434), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 84/263 (31%), Positives = 117/263 (44%), Gaps = 10/263 (3%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQK 63
           T+ATWN+NS+R R   +A  ++E  PDI+CLQE K+     P E+  +L Y ++   GQK
Sbjct: 4   TLATWNINSVRLREGLVARLLREEAPDILCLQECKSPVDKIPAESFAALGYPYMVARGQK 63

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            YNGVAILSK           GD                   + I N Y+P G  I   +
Sbjct: 64  GYNGVAILSKLPIE-----DAGDMDFAALGHARHVAGRLENGVVIHNFYVPAGGDIPDRE 118

Query: 124 YDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180
            ++K      +L           P      GD NI P+  D ++          T  EV 
Sbjct: 119 KNEKFGQKLDYLTEMRDWFRDGRPQKAILVGDLNIAPREDDVWSHKQLLKVVSHTPIEVA 178

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHSA 239
                 +  G+ D  R+      LYS+W Y A  W   +KG R+DH+  S +     HS+
Sbjct: 179 HLGDVQEAGGWVDVTRSDIPEGQLYSWWSYRAKDWDAADKGRRLDHVWASADLRHAFHSS 238

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
           R+    RGW +PSDH PV  + D
Sbjct: 239 RVLRAARGWEQPSDHAPVFATFD 261


>gi|163745437|ref|ZP_02152797.1| exodeoxyribonuclease III [Oceanibulbus indolifex HEL-45]
 gi|161382255|gb|EDQ06664.1| exodeoxyribonuclease III [Oceanibulbus indolifex HEL-45]
          Length = 262

 Score =  171 bits (433), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 78/263 (29%), Positives = 112/263 (42%), Gaps = 10/263 (3%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64
           +ATWN+NS+R R   +   + E+ PD++CLQE K+     P E  Q+  Y H+   GQK 
Sbjct: 5   LATWNINSVRLREPLVLKLLAEHGPDVLCLQECKSPVDKIPVEAFQAAGYTHMVARGQKG 64

Query: 65  YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124
           YNGVAILSK   ++            +    +           +     P G      + 
Sbjct: 65  YNGVAILSKLPLLDAGDQDFAMLGHARHVAAKLENGTTIHNFYV-----PAGGDKPDREI 119

Query: 125 DDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL-EVRQ 181
           ++K      +L         ++P      GD NI P+  D ++          T  EV  
Sbjct: 120 NEKFGQKLDYLSEMRDWFHSDKPEKSILVGDLNIAPREDDVWDHKKLLKIVSHTPVEVEA 179

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHSAR 240
                    + D  R    T +LYS+W Y A  W   +KG R+DHI  + +     HS+ 
Sbjct: 180 LGAVQDAGNWVDITRQDVPTGNLYSWWSYRAADWDAADKGRRLDHIWATADIAQAGHSSH 239

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263
           I    RGW KPSDH PV  S D+
Sbjct: 240 IVRDARGWEKPSDHAPVFASFDL 262


>gi|6980804|pdb|1DE8|B Chain B, Human ApurinicAPYRIMIDINIC ENDONUCLEASE-1 (Ape1) Bound To
           Abasic Dna
 gi|6980805|pdb|1DE8|A Chain A, Human ApurinicAPYRIMIDINIC ENDONUCLEASE-1 (Ape1) Bound To
           Abasic Dna
 gi|6980812|pdb|1DE9|A Chain A, Human Ape1 Endonuclease With Bound Abasic Dna And Mn2+ Ion
 gi|6980813|pdb|1DE9|B Chain B, Human Ape1 Endonuclease With Bound Abasic Dna And Mn2+ Ion
          Length = 276

 Score =  171 bits (433), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 73/269 (27%), Positives = 125/269 (46%), Gaps = 17/269 (6%)

Query: 2   SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN----YH 56
           + + + +WNV+ +RA I      W+KE  PDI+CLQETK  +   P E  +       Y 
Sbjct: 18  ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQYW 77

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                ++ Y+GV +LS+  P+++   +  ++ D + R I A F      + +       G
Sbjct: 78  SAPSDKEGYSGVGLLSRQCPLKVSYGIGDEEHDQEGRVIVAEF---DSFVLVTAYVPNAG 134

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
             +   +Y  +     R      + L   +PL+  GD N+  +  D  NP   + +A FT
Sbjct: 135 RGLVRLEYRQRWDEAFRKF---LKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 191

Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E +   + LQ +   D+ R  +    + Y+FW Y  ++ SKN G R+D+ +LS     
Sbjct: 192 PQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLP 251

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            L  ++I +K  G    SDH P+ + L +
Sbjct: 252 ALCDSKIRSKALG----SDHCPITLYLAL 276


>gi|254000228|ref|YP_003052291.1| exodeoxyribonuclease III Xth [Methylovorus sp. SIP3-4]
 gi|253986907|gb|ACT51764.1| exodeoxyribonuclease III Xth [Methylovorus sp. SIP3-4]
          Length = 260

 Score =  171 bits (433), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 72/267 (26%), Positives = 121/267 (45%), Gaps = 15/267 (5%)

Query: 1   MSVVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HI 57
           MS+  + + N+N IR A       W+++ N DI+C+QE K +  +   E L    Y  + 
Sbjct: 1   MSLYRIISANLNGIRSAANKGFYPWLQQQNADIVCMQELKAQLADMTPEMLNPEGYFGYF 60

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
               +K Y+GV I ++ QP  ++  L   D+D + R++E    +    L + +LYLP G+
Sbjct: 61  HYAEKKGYSGVGIYTRVQPDAVIVGLGIADIDAEGRYLE----LQFGNLSVVSLYLPSGS 116

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
                +   K S + RFL            ++  GD+NI  +  D  N    + ++ F  
Sbjct: 117 -SGEERQAFKFSVMTRFLVHLEALRAAGRDVVICGDWNIAHKEADLKNWKGNKKNSGFLP 175

Query: 178 EVRQSFQKLQNM-GFTDAIRATHDT--HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
           E R     L +  G+ D  R  H       Y++W     +W+KN G RID+ + +P   +
Sbjct: 176 EERAWLTDLFDRVGWVDVYRVLHPDTTDECYTWWSNRGQAWAKNVGWRIDYQIATPYFAA 235

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261
              +A I        + SDH P+I+  
Sbjct: 236 KAVAASIYK----LERFSDHAPLIIDY 258


>gi|85703387|ref|ZP_01034491.1| exodeoxyribonuclease III, putative [Roseovarius sp. 217]
 gi|85672315|gb|EAQ27172.1| exodeoxyribonuclease III, putative [Roseovarius sp. 217]
          Length = 262

 Score =  171 bits (433), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 86/264 (32%), Positives = 116/264 (43%), Gaps = 10/264 (3%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQK 63
           T+ATWN+NS+R R   +A  ++E  PDI+CLQE K+     P E   +L Y H+   GQK
Sbjct: 4   TLATWNINSVRLREGLVARLMQEEMPDILCLQECKSPVDKMPLEAFAALGYRHVVARGQK 63

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            YNGVAILSK    E+           +    +           +     P G  I    
Sbjct: 64  GYNGVAILSKLPMAEVGAMDFAGLGHARHIAGQLENGTVIHNFYV-----PAGGDIPDRA 118

Query: 124 YDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180
            +DK      +L           P      GD NI P+  D +N          T  EV 
Sbjct: 119 VNDKFGQKLDYLTEMRDWFRDSRPEKSILVGDLNIAPREDDVWNHKQLLKIVSHTPVEVE 178

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHSA 239
                ++  G+ D  RA      LYS+W Y A  W   NKG R+DH+  S +  +  HS+
Sbjct: 179 HLGDVMEAGGWQDVTRADIPEGQLYSWWSYRASDWDAANKGRRLDHVWASGDIRAAAHSS 238

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
           RI    RGW +PSDH PV  + D+
Sbjct: 239 RILRGARGWDQPSDHAPVFATFDL 262


>gi|294495018|ref|YP_003541511.1| exodeoxyribonuclease III [Methanohalophilus mahii DSM 5219]
 gi|292666017|gb|ADE35866.1| exodeoxyribonuclease III [Methanohalophilus mahii DSM 5219]
          Length = 244

 Score =  171 bits (433), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 67/251 (26%), Positives = 107/251 (42%), Gaps = 12/251 (4%)

Query: 15  RA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC--GQKSYNGVAIL 71
           RA        W+   +PDI+CLQETK      P    +   Y+       +K Y+GVA+ 
Sbjct: 2   RAVAKKGFLEWLTSESPDILCLQETKARPSQLPPNIRRIDGYYSYFSAAERKGYSGVALY 61

Query: 72  SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWI 131
           SK QP E+      +  D + R + A F        + N+Y P+GN         K+ + 
Sbjct: 62  SKVQPQEVRYGFGINRFDHEGRILIAFFD----HFVLFNIYFPNGNSSDER-LQYKMDFY 116

Query: 132 KRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191
             FL +  +  +    ++  GD N   +  D   P   E  + F    R+   K  + GF
Sbjct: 117 GAFLEYTQELRQEGYSVVVCGDLNTAHKAIDIARPKQNEKRSGFLPVEREWIDKFLSHGF 176

Query: 192 TDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP 251
            D  R  ++    Y++WD    +  +N G R+D+  +S +    +  A I ++  G    
Sbjct: 177 LDTFRLFNEEEGNYTWWDLKTRARDRNVGWRLDYFFVSADLKQGVKEAFILSEVTG---- 232

Query: 252 SDHTPVIVSLD 262
           SDH PV + LD
Sbjct: 233 SDHCPVGLELD 243


>gi|317154705|ref|YP_004122753.1| exodeoxyribonuclease III [Desulfovibrio aespoeensis Aspo-2]
 gi|316944956|gb|ADU64007.1| exodeoxyribonuclease III [Desulfovibrio aespoeensis Aspo-2]
          Length = 283

 Score =  171 bits (433), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 66/262 (25%), Positives = 104/262 (39%), Gaps = 15/262 (5%)

Query: 6   VATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSL----NYHIETC 60
           + +WNVN  RA I  N   W+     D++ LQETK        E  +      +Y   + 
Sbjct: 30  IYSWNVNGYRAVIKKNFRDWLDGCGGDVVMLQETKAHPDQLAPEEREPDSYANHYWNWSR 89

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GVA  +  +P+ +   LP      + R +   +        + N+Y P+G    
Sbjct: 90  KKKGYSGVACFANPEPLAVTIGLPDARFQGEGRVLHLEYP----DFHLFNIYFPNGQMGD 145

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
                             +Q L   +P++  GD+N      D  NP      + F  E R
Sbjct: 146 DRL--AFKMGFYDAFLDHAQALRKTKPIVVGGDFNTAHCEIDLKNPKANAERSGFLPEER 203

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
               +    G+ D  R   D    YS+W Y  ++   N G RID+  +S E    +  A 
Sbjct: 204 AWIDRFIAHGYVDTFRLFEDGPGHYSWWSYRFNARQNNAGWRIDYFFVSEELRPKVVRAW 263

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I+ +  G    SDH P+ V +D
Sbjct: 264 IEPEVPG----SDHCPIGVEID 281


>gi|297694584|ref|XP_002824554.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like isoform 1
           [Pongo abelii]
 gi|297694586|ref|XP_002824555.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like isoform 2
           [Pongo abelii]
 gi|146286035|sp|A2T7I6|APEX1_PONPY RecName: Full=DNA-(apurinic or apyrimidinic site) lyase; AltName:
           Full=APEX nuclease; Short=APEN; AltName:
           Full=Apurinic-apyrimidinic endonuclease 1; Short=AP
           endonuclease 1; AltName: Full=REF-1; AltName: Full=Redox
           factor-1; Contains: RecName: Full=DNA-(apurinic or
           apyrimidinic site) lyase, mitochondrial
 gi|124054149|gb|ABM89264.1| APEX1 [Pongo pygmaeus]
          Length = 318

 Score =  171 bits (433), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 73/269 (27%), Positives = 126/269 (46%), Gaps = 17/269 (6%)

Query: 2   SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN----YH 56
           + + + +WNV+ +RA I      W+KE  PDI+CLQETK  +   P E  +       Y 
Sbjct: 60  ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQYW 119

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                ++ Y+GV +LS+  P+++   +  ++ D + R I A F      + +       G
Sbjct: 120 SAPSDKEGYSGVGLLSRQCPLKVSYGIGEEEHDQEGRVIVAEF---DSFVLVTAYVPNAG 176

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
             +   +Y  +     R      + L   +PL+  GD N+  +  D  NP   + +A FT
Sbjct: 177 RGLVRLEYRQRWDEAFRRF---LKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 233

Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E +   + LQ +   D+ R  +    + Y+FW Y  ++ SKN G R+D+ +LS    +
Sbjct: 234 PQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLT 293

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            L  ++I +K  G    SDH P+ + L +
Sbjct: 294 ALCDSKIRSKALG----SDHCPITLYLAL 318


>gi|15890010|ref|NP_355691.1| exodeoxyribonuclease III [Agrobacterium tumefaciens str. C58]
 gi|15157983|gb|AAK88476.1| exodeoxyribonuclease III [Agrobacterium tumefaciens str. C58]
          Length = 267

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 78/263 (29%), Positives = 113/263 (42%), Gaps = 9/263 (3%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64
           + TWN+NS+R R+  +  ++    PDI+CLQETK  +  FP + L++L Y H+   GQK 
Sbjct: 5   ITTWNINSVRLRMPIVEQFLVRYKPDILCLQETKCPNGEFPMKPLKALGYEHVIIHGQKG 64

Query: 65  YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124
           Y+GVAI SK    E             AR I A F + ++ +R+ N Y+P G        
Sbjct: 65  YHGVAIASKIPLTEDHR--QDYCGIGDARHISAIFQVGSRRVRLHNFYVPAGGDEPDRSI 122

Query: 125 DDKISWIKRFLRFASQRL---ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR- 180
           + K      F+                I  GD NI P  +D ++          T     
Sbjct: 123 NPKFGHKLDFIEEMKALRADGVPGTSSILVGDLNIAPLENDVWSHKQLLKIVSHTPVETE 182

Query: 181 -QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHS 238
                  +            +T  +Y++W Y A  W   N+G R+DHI  S +  S L  
Sbjct: 183 GMLDIMKKGNWLDLMRLNVPETEKIYTWWSYRAKDWEAANRGRRLDHIWSSQDLGSSLEK 242

Query: 239 ARIDTKPRGWTKPSDHTPVIVSL 261
             I  + RGW +PSDH PV    
Sbjct: 243 IEILREARGWNRPSDHVPVTAHF 265


>gi|301788284|ref|XP_002929556.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like isoform 1
           [Ailuropoda melanoleuca]
 gi|301788286|ref|XP_002929557.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like isoform 2
           [Ailuropoda melanoleuca]
 gi|301788288|ref|XP_002929558.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like isoform 3
           [Ailuropoda melanoleuca]
 gi|281345899|gb|EFB21483.1| hypothetical protein PANDA_019762 [Ailuropoda melanoleuca]
          Length = 318

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 73/269 (27%), Positives = 125/269 (46%), Gaps = 17/269 (6%)

Query: 2   SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN----YH 56
           + + + +WNV+ +RA I      W+KE  PDI+CLQETK  +   P E  +       Y 
Sbjct: 60  ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELSGLSHQYW 119

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                ++ Y+GV +LS+  P+++   +  ++ D + R I A F      + +       G
Sbjct: 120 SAPSDKEGYSGVGLLSRQCPLKVSYGIGEEEHDQEGRVIVAEF---DAFVLVTAYVPNAG 176

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
             +   +Y  +     R      + L   +PL+  GD N+  +  D  NP   + +A FT
Sbjct: 177 RGLVRLEYRQRWDEAFRKF---LKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 233

Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E +   + LQ +   D+ R  +    + Y+FW Y  ++ SKN G R+D+ +LS     
Sbjct: 234 PQERQGFGELLQAVPLADSFRHLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLP 293

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            L  ++I +K  G    SDH P+ + L +
Sbjct: 294 ALCDSKIRSKALG----SDHCPITLYLAL 318


>gi|148927710|ref|ZP_01811154.1| exodeoxyribonuclease III Xth [candidate division TM7 genomosp.
           GTL1]
 gi|147886940|gb|EDK72466.1| exodeoxyribonuclease III Xth [candidate division TM7 genomosp.
           GTL1]
          Length = 266

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 78/270 (28%), Positives = 125/270 (46%), Gaps = 18/270 (6%)

Query: 4   VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + +WNVN IRA ++      ++KE++PDI+CLQETK E      +    +  +  +  
Sbjct: 1   MKIYSWNVNGIRAVVNKGAFQKFVKEHDPDILCLQETKAERGQAEIDLPHYIE-NWNSAV 59

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDL---------DVQARFIEATFTINTQTLRIGNLY 112
           +K Y+G AI SK QP+ I+   P D +                        +   I  +Y
Sbjct: 60  KKGYSGTAIFSKTQPLSIINGFPEDIIKKYKVEGDVYGDPNKEGRVMAAEFEDFYIVTVY 119

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
            P+     +     +  W   FL +  Q LE  +P+IF GD N+     D   P     +
Sbjct: 120 TPNSKRELTRLTLREKHWDPAFLAYVKQ-LEKTKPVIFCGDLNVAHTEDDLARPDTNHGE 178

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
             FT E R+ FQK  + GF D  R      +  Y++W ++A++ ++N G RID+ ++S  
Sbjct: 179 HGFTDEEREGFQKFLDAGFVDTFRMFTPKGNGHYTWWTHWANARARNVGWRIDYFLVSHA 238

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
             S + SA+I     G    SDH P+ + L
Sbjct: 239 LKSKVKSAKIHADVMG----SDHCPISIEL 264


>gi|56477309|ref|YP_158898.1| exodeoxyribonuclease III [Aromatoleum aromaticum EbN1]
 gi|56313352|emb|CAI07997.1| exodeoxyribonuclease III [Aromatoleum aromaticum EbN1]
          Length = 260

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 68/266 (25%), Positives = 116/266 (43%), Gaps = 15/266 (5%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59
           ++ V T N+N +R+ +      W+   N D +C+QE K +  +          Y  H   
Sbjct: 1   MLRVITLNLNGVRSAVGKGFLDWLATQNADAVCVQELKAQAGDLTGAVRTPNGYIGHFHH 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GV + ++  P  IV  L   D+D + RF++  F      L + +LYLP G+  
Sbjct: 61  AEKKGYSGVGLYARRPPDRIVEGLGIADIDAEGRFLQLDFG----PLSVVSLYLPSGSSS 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +   K  +++RFL   +        +I  GD+NI  +  D  N    + ++ F  E 
Sbjct: 117 EERQQV-KFGFMERFLPHLATLRNCGREIIVCGDWNIAHREIDLKNWKSNQKNSGFLPEE 175

Query: 180 RQSFQKLQNMGFT-DAIRATHDTHHL--YSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
           R  F ++       D  R  +       Y++W     +W+KN G R+D+ + +P   +  
Sbjct: 176 RAWFSRVLEEQAWVDVYRRLYPDAGGEGYTWWSNRGQAWAKNVGWRLDYQIATPGIAATA 235

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLD 262
            SA +    R     SDH P+ V  D
Sbjct: 236 KSAAVYKAER----FSDHAPLAVDYD 257


>gi|283955329|ref|ZP_06372828.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni 414]
 gi|283793089|gb|EFC31859.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni 414]
          Length = 252

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 62/262 (23%), Positives = 98/262 (37%), Gaps = 12/262 (4%)

Query: 4   VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA    N   WI +   D I  QE K  +  FP +  +    H+     
Sbjct: 1   MKLLSWNVNGLRAICDKNALDWITKEKIDFIGFQEIKAHEDKFPKKIYEYPFKHMYFNSA 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K      ++S       V      D +           I    +   N            
Sbjct: 61  KRAGYSGVMSLCNFDSEVKKCEFFDDEEGRVLEHRFKNIALFNIYFPN------GQKDEE 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           + + K+ +   FL +  + L+    +I  GD N   +  D  +P    N + F    R  
Sbjct: 115 RLNFKMKFYADFLVYLDKLLKDGFEIIICGDVNTAHKEIDLTHPKANANTSGFLPIERAW 174

Query: 183 FQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
              L  +GF D  R  + +    YS+W Y   +  +N G RID+  +S    + L +A I
Sbjct: 175 IDDLLKLGFIDTFREINGEIKEKYSWWSYRMKARERNVGWRIDYFFISQGLQNRLKNAFI 234

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
                G    SDH PV + +DI
Sbjct: 235 REDIFG----SDHAPVGIEIDI 252


>gi|295675147|ref|YP_003603671.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1002]
 gi|295434990|gb|ADG14160.1| exodeoxyribonuclease III Xth [Burkholderia sp. CCGE1002]
          Length = 259

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 62/264 (23%), Positives = 111/264 (42%), Gaps = 14/264 (5%)

Query: 3   VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59
           ++ V T N+N IR A       W  E   D++C+QE K    +   E +   ++  + + 
Sbjct: 1   MLRVITANLNGIRSAAKKGFFEWFGEQGADVLCVQEIKCSQDDMTPEFMAPHDFTGYFQH 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G  + ++++P E+V     ++ D + R++E  F      L + ++Y+P G+  
Sbjct: 61  AVKKGYSGAGVYTRHEPDEVVIGFGSEEFDPEGRYVELRFG----KLSVVSVYVPSGSSG 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +                  L  E  +I  GD NI+ +  D  N    + ++    E 
Sbjct: 117 DERQQA--KFRFMDEFMPHLAELAKEREVIVCGDVNIVHKEIDIKNWKSNQKNSGCLPEE 174

Query: 180 RQSFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R    KL +  G+ D  R        Y++W     +++KN G RID+ + +P   S    
Sbjct: 175 RAWLDKLFDEVGYVDVFRTLDQRPEQYTWWSNRGQAYAKNVGWRIDYQIATPGIASKAKR 234

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
             +        K SDH P+ V  D
Sbjct: 235 TDVFRDI----KFSDHAPLTVDYD 254


>gi|222087552|ref|YP_002546089.1| exodeoxyribonuclease III [Agrobacterium radiobacter K84]
 gi|221725000|gb|ACM28156.1| exodeoxyribonuclease III [Agrobacterium radiobacter K84]
          Length = 267

 Score =  171 bits (433), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 78/265 (29%), Positives = 118/265 (44%), Gaps = 9/265 (3%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64
           +ATWN+NS+R R+  +  ++ ++ PDI+CLQETK  ++ FP+  L++L Y HI   GQK 
Sbjct: 5   IATWNINSVRLRMPIVEQFLMQSRPDILCLQETKVPNELFPYAPLRALGYEHIIIHGQKG 64

Query: 65  YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124
           Y+GVAI S++   E       +  D +            + +R+ N Y+P G        
Sbjct: 65  YHGVAIASRFPLTEDHRQDYCNVGDSRHISAIFERG--GRRIRVHNFYVPAGGDEPDRTI 122

Query: 125 DDKISWIKRFLRFASQRL---ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
           + K      F+          E     I  GD NI P  HD ++          T     
Sbjct: 123 NPKFGHKLDFIEEMKHLHANAEQNTSAILVGDLNIAPLEHDVWSHKQLLKIVSHTPVETD 182

Query: 182 SFQKLQNMGFTDAIRATH--DTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHS 238
              ++   G    +   H      LY++W Y A  W   ++G R+DHI  S +   LL  
Sbjct: 183 GLLEVMKRGAWLDLMRQHVPANEKLYTWWSYRAKDWEVADRGRRLDHIWSSSDLGPLLQR 242

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263
             I    RGW +PSDH PV    ++
Sbjct: 243 IDILKAARGWDRPSDHVPVTAHFNL 267


>gi|57168378|ref|ZP_00367512.1| exodeoxyribonuclease III [Campylobacter coli RM2228]
 gi|305432793|ref|ZP_07401952.1| exodeoxyribonuclease III [Campylobacter coli JV20]
 gi|57020186|gb|EAL56860.1| exodeoxyribonuclease III [Campylobacter coli RM2228]
 gi|304444190|gb|EFM36844.1| exodeoxyribonuclease III [Campylobacter coli JV20]
          Length = 252

 Score =  171 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 64/262 (24%), Positives = 99/262 (37%), Gaps = 12/262 (4%)

Query: 4   VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA    N   WI + N D I  QE K  +  FP +  +    H+ +   
Sbjct: 1   MKLLSWNVNGLRAICDKNALDWIIKENIDFIGFQEIKAHEDKFPKKIYEYPFKHMYSNSA 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K      ++S       V      D +           I    +   N            
Sbjct: 61  KRAGYSGVMSLCNFDSEVKKCEFFDDEEGRVLEHRFKNIALFNIYFPN------GQKDEE 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +   K+ +  +FL +  + L+    +I  GD N   +  D  +P    N + F    R  
Sbjct: 115 RLSFKMKFYAKFLVYLEKLLKDGFEIIICGDVNTAHKEIDLTHPKANANTSGFLPIERAW 174

Query: 183 FQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
              L  +GF D  R  + D    YS+W Y   +  +N G RID+  +S      L +A I
Sbjct: 175 IDDLLKLGFIDTFREINGDIKEKYSWWSYRMKARERNVGWRIDYFFISTGLKDKLKNAFI 234

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
                G    SDH PV + +DI
Sbjct: 235 RDDIFG----SDHAPVGIEIDI 252


>gi|300767631|ref|ZP_07077541.1| exodeoxyribonuclease III [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|300494616|gb|EFK29774.1| exodeoxyribonuclease III [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
          Length = 265

 Score =  171 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 69/263 (26%), Positives = 111/263 (42%), Gaps = 13/263 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           V + +WNVN +RA +         E + D  C+QETK +      +       +     +
Sbjct: 12  VKLISWNVNGLRAAVKHGFVMTFNELDADFFCVQETKLQAGQIELD-FPGYYQYWNYAER 70

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K++P+ +   +   + D + R I   +        +       G  +   
Sbjct: 71  KGYSGTAIFTKHEPLNVTYGIGVPEFDDEGRVITLEYA---DYYVLTCYTPNSGGELKRL 127

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
            Y  +    +         L   +PLIF GD N+  +  D  N     + A FT E R  
Sbjct: 128 DYRQQW---EDAFLTYINSLSANKPLIFCGDLNVAHENIDLKNWRSNHHSAGFTDEERTK 184

Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L   G+TD  R  +     +YS+W Y   +   N G RID+ + S +  S L +ARI
Sbjct: 185 FDRLLAAGYTDTFRHFYPDQTDIYSWWSYRGHARDNNSGWRIDYFITSQQLDSQLLNARI 244

Query: 242 DTKPRGWTKPSDHTPVIVSLDIP 264
             +  G    SDH PV + + +P
Sbjct: 245 HNEIFG----SDHCPVELDIILP 263


>gi|330814067|ref|YP_004358306.1| exodeoxyribonuclease III [Candidatus Pelagibacter sp. IMCC9063]
 gi|327487162|gb|AEA81567.1| exodeoxyribonuclease III [Candidatus Pelagibacter sp. IMCC9063]
          Length = 247

 Score =  171 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 97/247 (39%), Positives = 141/247 (57%), Gaps = 2/247 (0%)

Query: 15  RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKY 74
           R R++ +  ++K+   D++ LQE KTEDKNFP E  + + YH  + GQKSYNGVAI+SK 
Sbjct: 2   RIRVNQVKDYLKKKEIDVLVLQEIKTEDKNFPHEDFKKIGYHSYSFGQKSYNGVAIISKE 61

Query: 75  QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRF 134
           +     +         Q+R I A  + N +   + ++YLP+GNPI + KYD K  W+  F
Sbjct: 62  ELKVTTSEFKD--PLGQSRCIAAEVSHNDKKFLLVSIYLPNGNPINTEKYDYKKKWMDVF 119

Query: 135 LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDA 194
            ++   + +  + +I  GD+N+IP   D  NP  W NDA F LE+R+ F+ L N+GF D 
Sbjct: 120 EKYIVGKFKKNKNIIITGDFNVIPSEEDVGNPEDWTNDALFKLEIRKKFRSLLNLGFKDG 179

Query: 195 IRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDH 254
            R  +     Y+FWDY   SW +NKG+RIDH ++S      L +  ID   R   +PSDH
Sbjct: 180 FRLFNKEPKEYTFWDYQQGSWQRNKGLRIDHYLVSDSMIQDLKTIEIDKFTRDNERPSDH 239

Query: 255 TPVIVSL 261
            P+   L
Sbjct: 240 VPIRCVL 246


>gi|282855240|ref|ZP_06264572.1| exodeoxyribonuclease III [Propionibacterium acnes J139]
 gi|282581828|gb|EFB87213.1| exodeoxyribonuclease III [Propionibacterium acnes J139]
 gi|314924052|gb|EFS87883.1| exodeoxyribonuclease III [Propionibacterium acnes HL001PA1]
 gi|314965024|gb|EFT09123.1| exodeoxyribonuclease III [Propionibacterium acnes HL082PA2]
 gi|314983099|gb|EFT27191.1| exodeoxyribonuclease III [Propionibacterium acnes HL110PA3]
 gi|315090643|gb|EFT62619.1| exodeoxyribonuclease III [Propionibacterium acnes HL110PA4]
 gi|315093843|gb|EFT65819.1| exodeoxyribonuclease III [Propionibacterium acnes HL060PA1]
 gi|327326466|gb|EGE68255.1| exodeoxyribonuclease III [Propionibacterium acnes HL103PA1]
          Length = 297

 Score =  171 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 60/297 (20%), Positives = 107/297 (36%), Gaps = 37/297 (12%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + +A++N+N IRA +    + W++  + D+I LQE +    + P       +        
Sbjct: 1   MRIASFNINGIRAALKRGFSEWMEARDCDVIGLQEVRCRPADLPEGAFGDRHVSWAPGSL 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDL------------------------DVQARFIEAT 98
              NGVA+L++  P E+ +      +                                  
Sbjct: 61  AGRNGVALLTRTAPAEVRSWGTHLVMTPGQAPTPAQVLTGNTNGLPTELLPFADEGRYIE 120

Query: 99  FTINTQTLRIGNLYLPHGNPITS----------TKYDDKISWIKRFLRFASQRLELEEPL 148
             +    L +  LYLP G                K      +    +R   +        
Sbjct: 121 VDLADTPLTVACLYLPKGATPDPANEKAIAKQDRKMAFLAGFRDHLVRRRQECTAQGRHF 180

Query: 149 IFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL--QNMGFTDAIRATHDTHHLYS 206
           +  GD+NI  +  D  N    +++  F  E RQ F  +   +           DT+  YS
Sbjct: 181 LVMGDFNIAHENADLKNWKANQHNEGFLPEERQWFDTILSPDTLIDVVRAQHPDTNGPYS 240

Query: 207 FWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +W +   ++  + G RID+ + SPE  S   ++ ID  P    + SDH  V++  D+
Sbjct: 241 WWSWRGKAFVNDAGWRIDYHLASPELASKAITSEIDRDPSYSERTSDHAAVVIDYDL 297


>gi|146329467|ref|YP_001209345.1| exodeoxyribonuclease III [Dichelobacter nodosus VCS1703A]
 gi|146232937|gb|ABQ13915.1| exodeoxyribonuclease III [Dichelobacter nodosus VCS1703A]
          Length = 260

 Score =  171 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 79/265 (29%), Positives = 135/265 (50%), Gaps = 7/265 (2%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +  + +WNVNS+  R + +  + K N+ DI+ LQE K ED     +      +++ET GQ
Sbjct: 1   MTKIGSWNVNSLNVRKNQVIDYFKNNDLDILGLQELKQEDAAIDKKAFLDAGWYLETFGQ 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K+YNGVA+LSK  P  +V  +P            +        +R+ NLY+P+G  +   
Sbjct: 61  KTYNGVALLSKTPPENVVRGIPDYHDPAARAIAASYGA-----MRVLNLYVPNGKAVFDE 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           K+  K+ W++   R+ +        L+  GD+NI P   D ++P  ++     +   R++
Sbjct: 116 KFHYKLEWLQHVQRYIAHLCAHYPHLVVIGDFNIAPTDRDVFDPRQFQEKLLCSDAERRA 175

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
              L  +G  D+ R  H     +S+WDY  ++W +N G+RID +++S +    L +A ID
Sbjct: 176 LHALFALGLRDSFREMHPEKTQFSWWDYRYNAWQRNLGLRIDLVLISSKL--RLIAADID 233

Query: 243 TKPRGWTKPSDHTPVIVSLDIPEPR 267
           T+ R   +PSDH+ V   ++ P   
Sbjct: 234 TQTRQNERPSDHSVVWAQVENPSGE 258


>gi|114775670|ref|ZP_01451238.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth
           [Mariprofundus ferrooxydans PV-1]
 gi|114553781|gb|EAU56162.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth
           [Mariprofundus ferrooxydans PV-1]
          Length = 263

 Score =  171 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 62/263 (23%), Positives = 101/263 (38%), Gaps = 8/263 (3%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFE-TLQSLNYHIETCG 61
           + + T N+N IR+        W    + DI+CLQE K      P E  L+  + H     
Sbjct: 1   MKIITANLNGIRSATRKGFWEWFAAQDADILCLQELKAHIHQLPPESLLKDYHRHYHFAQ 60

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL--RIGNLYLPHGNPI 119
           +  Y+GVA+ S+ QP  +   L   D        +A                        
Sbjct: 61  KPGYSGVALYSRKQPDTVHVGLGSIDPATDWSRFDAEGRFVMTDFGTLSVISAYFPSGSG 120

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
           T  +   K+ ++++FL   ++  +    LI  GD NI  +  D  N      ++ F  E 
Sbjct: 121 TPERQAGKMVFLEQFLPLITRLKDQGRELIICGDINIAHRNIDLKNWRGNRKNSGFLPEE 180

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R  F +  N GF D  R  +     YS+W     + + N G RID+ + + +  +     
Sbjct: 181 RAWFDQCLNAGFVDLFRQLYPEREQYSWWSNRGQARANNVGWRIDYHLCTQKTAATACEV 240

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
            + T        SDH PV  + +
Sbjct: 241 SVFTDA----WFSDHAPVTANFN 259


>gi|313206096|ref|YP_004045273.1| exodeoxyribonuclease iii xth [Riemerella anatipestifer DSM 15868]
 gi|312445412|gb|ADQ81767.1| exodeoxyribonuclease III Xth [Riemerella anatipestifer DSM 15868]
 gi|315023722|gb|EFT36725.1| Exodeoxyribonuclease III [Riemerella anatipestifer RA-YM]
 gi|325336460|gb|ADZ12734.1| Exonuclease III [Riemerella anatipestifer RA-GD]
          Length = 253

 Score =  171 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 72/263 (27%), Positives = 119/263 (45%), Gaps = 14/263 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC-- 60
           + + ++NVN IRA    +L  W+    PD+IC QE+K +       + +   YH      
Sbjct: 1   MKIISYNVNGIRAAFNKDLIGWLGHAAPDVICFQESKAQKDQIDIASFEKEGYHTYWFSA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GV I +K QP  +      +  D + R I   F        + ++Y+P    I 
Sbjct: 61  EKKGYSGVGIATKIQPKHVEYGCDMELYDKEGRVIRVDFE----DFSVISVYVPSATNID 116

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EV 179
               D K+ +   FL +  +  +    LI +GD+NI  Q  D ++P+  +N + F   E 
Sbjct: 117 R--LDFKMQFCYDFLAYIKELRKTIPNLIISGDFNICHQAIDIHDPVRLKNVSGFLPIER 174

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
               + L+  G  D+ R  +   + YS+W Y  ++ + NKG R+D+  +S    S L   
Sbjct: 175 EWMTEFLKECGLIDSFRYFNTEPNQYSWWSYRQNARANNKGWRLDYHFVSDSLESRLSRG 234

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
            I +        SDH PV+V L 
Sbjct: 235 LILSDAY----HSDHCPVLVELK 253


>gi|254468203|ref|ZP_05081609.1| exodeoxyribonuclease III [beta proteobacterium KB13]
 gi|207087013|gb|EDZ64296.1| exodeoxyribonuclease III [beta proteobacterium KB13]
          Length = 259

 Score =  171 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 72/265 (27%), Positives = 124/265 (46%), Gaps = 15/265 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60
           + V T N+N IR+ +      W++  + D IC+QE K ++K+   E L    Y  +    
Sbjct: 1   MRVITVNLNGIRSALRKGFFEWMRIQDADFICIQELKAQEKDMTEEMLNINGYAGYFSYA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +  Y+GV I +K +P +I++ L  D +D + R+IE    +    + I + Y P G+   
Sbjct: 61  EKPGYSGVGIYTKIKPKKIISKLNFDTIDDEGRYIE----LIYDDVSIISSYFPSGS-SG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             + + K +++K      + + + +E +I  GD NI  +  D  N    + ++ F  E R
Sbjct: 116 DIRQEIKFNFLKFMTELLNLKTQKKEKIILCGDLNIAHKEIDLKNHKGNKKNSGFLPEER 175

Query: 181 QSFQKLQNM-GFTDAIRATHDTHHL--YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
                L    G+ D  R  +       Y++W     +W+ N G RID+ M SP  T  + 
Sbjct: 176 AWITNLIEEIGWKDTYRNIYPNEEELAYTWWSNRGQAWANNVGWRIDYQMTSPSLTFQIK 235

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLD 262
            A +  + R     SDH+P+IV  D
Sbjct: 236 DAVVYKEER----FSDHSPLIVDYD 256


>gi|217969119|ref|YP_002354353.1| exodeoxyribonuclease III Xth [Thauera sp. MZ1T]
 gi|217506446|gb|ACK53457.1| exodeoxyribonuclease III Xth [Thauera sp. MZ1T]
          Length = 260

 Score =  171 bits (432), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 69/267 (25%), Positives = 117/267 (43%), Gaps = 15/267 (5%)

Query: 3   VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59
           ++ + T N+N IR A    L  W+     D +C+QE K +D +   E             
Sbjct: 1   MLRIITLNLNGIRSACTKGLLDWLPAQQADFLCVQELKAQDADLRPEMRAPAGMQGWFHA 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GV I S++ P  +V  L    +D + RF++  F      L + +LYLP G+  
Sbjct: 61  AEKKGYSGVGIYSRHAPDRVVEGLGIPAIDAEGRFLQLDFG----KLSVVSLYLPSGSSS 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +   K  ++ RFL    Q  +  + ++  GD+NI  +  D  N    + ++ F  E 
Sbjct: 117 AERQQV-KFDFMDRFLPHMDQLFQSGQEVVVCGDWNIAHREADLKNWKSNQKNSGFLPEE 175

Query: 180 RQSFQKLQNMG-FTDAIRATHDT--HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
           R    +L +   + D  R  H       Y++W     +W+KN G R+D+ + +P   +  
Sbjct: 176 RAWLGRLFDEQGWIDVYRRLHPEATEACYTWWSNRGQAWAKNVGWRLDYQVATPGLAASA 235

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263
            +A +    R     SDH P+ V  D 
Sbjct: 236 QAAEVYKAQR----FSDHAPLTVDYDW 258


>gi|270159291|ref|ZP_06187947.1| exodeoxyribonuclease III [Legionella longbeachae D-4968]
 gi|289165885|ref|YP_003456023.1| exodeoxyribonuclease [Legionella longbeachae NSW150]
 gi|269987630|gb|EEZ93885.1| exodeoxyribonuclease III [Legionella longbeachae D-4968]
 gi|288859058|emb|CBJ12987.1| putative exodeoxyribonuclease [Legionella longbeachae NSW150]
          Length = 260

 Score =  170 bits (431), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 71/264 (26%), Positives = 121/264 (45%), Gaps = 14/264 (5%)

Query: 4   VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKN-FPFETLQSLNYHI--ET 59
           + V ++N N IR A  +    W+   + D +C+QETK +     P E     +Y+    +
Sbjct: 1   MKVISFNANGIRSAARNGFYEWLVTQDADFVCIQETKVQPDQLIPEEIYYPRDYYCDYYS 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GVAI ++ +P+ ++  +  D  D + R+I+  +        I +LYLP G   
Sbjct: 61  AQKKGYSGVAIYARNKPLRVIKGIGFDYCDNEGRYIQFDYP----KFSIVSLYLPSG-TS 115

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              + + K  ++++F     Q       LI  GDYNI  +  D  N      ++ F  E 
Sbjct: 116 GEQRQEVKYQFLEQFANHLMQLKNEGRELIICGDYNIAHKEIDLKNWKSNRKNSGFLPEE 175

Query: 180 RQSFQKLQN-MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R    +L   MGF DA R  +     Y++W +   +W KN G RID+ +++P     +  
Sbjct: 176 RAWMDELFGGMGFVDAFRVHNQEEEQYTWWSFRGRAWEKNVGWRIDYQVVTPGFIEDVVY 235

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
           + I    R     SDH P+++   
Sbjct: 236 SHIFRDVR----LSDHAPLLIEYK 255


>gi|319409386|emb|CBI83030.1| exodeoxyribonuclease III [Bartonella schoenbuchensis R1]
          Length = 271

 Score =  170 bits (431), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 79/265 (29%), Positives = 119/265 (44%), Gaps = 9/265 (3%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQK 63
            +ATWNVNSIR R+  +  ++    PDI+CLQETK  D  FP E  Q+  Y HI   GQK
Sbjct: 4   RIATWNVNSIRLRLAQVLQYLDLFAPDILCLQETKCPDHLFPREPFQAAGYEHIALSGQK 63

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           SY+GVA++S+   +++           + R++        + +RI N Y+P G       
Sbjct: 64  SYHGVAVVSRLPLLDVEKRFFCQ--KEECRYLSVVVQPCGRAIRIHNFYVPAGGDEPDVS 121

Query: 124 YDDKISWIKRF---LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EV 179
            ++K      F   +             +  GD NI P   D ++     N    T  E 
Sbjct: 122 VNEKFRHKLDFLEEMSSIRADQGDGLSSLLLGDLNIAPLEDDVWSHKKLLNVVSHTPVET 181

Query: 180 RQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLH 237
            +     +  G+ D +R        LY++W Y A  ++  ++G R+DHI  SP+    + 
Sbjct: 182 ERLQALCREGGWIDLMRIKFPVPAKLYTWWSYRARDFALSDRGRRLDHIWSSPDLAPFMD 241

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLD 262
              I    RG  +PSDH PV    D
Sbjct: 242 DLSIFRAARGEPQPSDHVPVQTVFD 266


>gi|308176500|ref|YP_003915906.1| exodeoxyribonuclease III [Arthrobacter arilaitensis Re117]
 gi|307743963|emb|CBT74935.1| exodeoxyribonuclease III [Arthrobacter arilaitensis Re117]
          Length = 279

 Score =  170 bits (431), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 61/263 (23%), Positives = 112/263 (42%), Gaps = 6/263 (2%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + VA+ NVN IRA    N+A WI   + DI+CLQE +  DK       +  +        
Sbjct: 16  LRVASVNVNGIRAAYKRNMADWIAARDVDILCLQEVRAPDKILRDLIGEGWHILHAEAKD 75

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K   GVA+LS+  P+ +  H+  D      R++EA F +N +   + + Y+  G  + + 
Sbjct: 76  KGRAGVAVLSRTAPVAVREHIGEDYFAESGRWVEADFEVNGEVFTVVSAYVHSGE-LGTQ 134

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           K +DK  +++R      +    ++ ++  GD N++    D  N     N     ++   +
Sbjct: 135 KQEDKYRFLQRMNVRLVELKNEKDHVLVVGDLNVVHTQKDIKNWKPNHNKRAGVMDEEIA 194

Query: 183 FQKLQNMGFTDA----IRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           +                    D    Y++W +   ++  + G RID+ M +P   +    
Sbjct: 195 YFDGFFGPQIGYKDVARELAGDVQGPYTWWSFRGQAFDNDAGWRIDYHMATPALAAKAIK 254

Query: 239 ARIDTKPRGWTKPSDHTPVIVSL 261
           + +D       + SDH P++V  
Sbjct: 255 SHVDRASAYDLRFSDHAPLVVDY 277


>gi|68535324|ref|YP_250029.1| exodeoxyribonuclease III [Corynebacterium jeikeium K411]
 gi|68262923|emb|CAI36411.1| exodeoxyribonuclease III [Corynebacterium jeikeium K411]
          Length = 266

 Score =  170 bits (431), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 75/271 (27%), Positives = 121/271 (44%), Gaps = 18/271 (6%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+NS+R R   +  +++ +  D++CLQETK  DK FP        Y     G  
Sbjct: 1   MRIATWNINSVRTREDRVREFLQRSEVDVLCLQETKCTDKQFP--DFTDTGYEQAHFGLH 58

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQ----ARFIEATFTINTQTLRIGNLYLPHGNPI 119
           S+NGVAILS+    ++ T       +                    + + +LY+P+G  I
Sbjct: 59  SFNGVAILSRVGLADVQTDFGQPGFNKDLDAEQALEARAIGATCGGVEVWSLYVPNGREI 118

Query: 120 TSTKYDDKISWIKRFLRFA------SQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
               Y  K+ W+     +A      + + +  E L   GDYNI P+  D ++   ++   
Sbjct: 119 ADPHYSYKLRWLDALAAYAAGSGVGASQRKSSEKLCLVGDYNIAPRDEDVWDRSYFDGRT 178

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
             T   R   + L++ G + A        + Y++WDY A  + K +G+RID        T
Sbjct: 179 HVTPNERARLRALEDAGLSAATDLI---ANEYTYWDYQAMRFQKGEGMRIDLQYA-RGIT 234

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
               +AR+D   R     SDH PVIV  ++ 
Sbjct: 235 P--TAARVDRDERKGKGASDHAPVIVDYNVD 263


>gi|89052912|ref|YP_508363.1| exodeoxyribonuclease III [Jannaschia sp. CCS1]
 gi|88862461|gb|ABD53338.1| exodeoxyribonuclease III [Jannaschia sp. CCS1]
          Length = 262

 Score =  170 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 81/264 (30%), Positives = 119/264 (45%), Gaps = 10/264 (3%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQK 63
           T+ATWN+NS+R R   ++  + E  PDI+CLQE K+     P +   +L Y H+   GQK
Sbjct: 4   TLATWNINSVRLRQPIVSQLMTEEAPDILCLQECKSPVDKMPSDVFAALGYTHVVARGQK 63

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            YNGVAI SK    E  +H        +              + I N Y+P G  +    
Sbjct: 64  GYNGVAIYSKLPMEEAGSHEFAGLDHARHIAGRLENG-----VTIHNFYVPAGGDVPDRD 118

Query: 124 YDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180
            + K      +L       + + P      GD NI P+  D ++          T  EV 
Sbjct: 119 VNIKFGQKLDYLTDMRDWAKTDTPQKSILLGDLNIAPREDDVWSHKQLLKVVSHTPIEVE 178

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLLHSA 239
              +     G+ D  R       L+S+W Y +  W   +KG R+DH+  +P+ ++  HS+
Sbjct: 179 HLAEAQDAGGWVDVTRKDIPDGPLFSWWSYRSPDWDNADKGRRLDHVWATPDISNAAHSS 238

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
           RI    RGW KPSDH PV  + D+
Sbjct: 239 RIARHVRGWEKPSDHAPVFATFDL 262


>gi|126651518|ref|ZP_01723722.1| exodeoxyribonuclease [Bacillus sp. B14905]
 gi|126591771|gb|EAZ85867.1| exodeoxyribonuclease [Bacillus sp. B14905]
          Length = 251

 Score =  170 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 64/260 (24%), Positives = 110/260 (42%), Gaps = 13/260 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN IRA +      +  +   D  C+QETK +        L     +     +
Sbjct: 1   MKFISWNVNGIRACLGKGFLDFFHQIEADFFCIQETKCQAGQVEL-ALDDYEQYWNYAQK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K+ P+ ++  +  +D   + R I   +    Q   + N+Y P+     + 
Sbjct: 60  KGYSGTAIFTKHTPLSVMYGVGDEDSQDEGRIITLEY----QNFYLVNVYTPNAQRDLAR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +  L    Q L  ++P+++ GD N+     D  N      ++ FT E R  
Sbjct: 116 L--PLRLTWEDRLAGYLQDLNSKKPVVYCGDLNVAHTEIDLKNAKSNVGNSGFTYEERAK 173

Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L   GF D+ R  H      +++W Y      +N G RID+ ++S +  + +  A I
Sbjct: 174 FSELLASGFVDSFRYKHPNETDHFTWWSYMNKVRERNIGWRIDYFIVSEQLKNQIDQATI 233

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
                G    SDH P+ + L
Sbjct: 234 HPHIMG----SDHCPIELQL 249


>gi|114571487|ref|YP_758167.1| exodeoxyribonuclease III [Maricaulis maris MCS10]
 gi|114341949|gb|ABI67229.1| exodeoxyribonuclease III [Maricaulis maris MCS10]
          Length = 270

 Score =  170 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 74/269 (27%), Positives = 127/269 (47%), Gaps = 12/269 (4%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETC 60
            +T+A+WN+NS+R R +  +A W++E +PD++CLQE K  ++ FP E  + + + H    
Sbjct: 2   TLTLASWNINSVRLRAVPLIADWVQEADPDVLCLQEIKCLEEQFPEEAFREMGFRHFHVR 61

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           GQK  +GVAI SKY   ++         + + + +     I      I        +P  
Sbjct: 62  GQKGMHGVAIASKYPLEDLGDVELCPRGEARHQRVGVE-GIELHNFYIPAG-GDEPDPAI 119

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
           + ++  K+ ++ R  R+ + R      L+  GD+NI P  HD ++          T    
Sbjct: 120 NPRFAHKLEFLDRIERYFAGRASENAALVLVGDFNIAPYEHDVWSHKQLLKVVSHTPVEV 179

Query: 181 QSFQKLQNMGFTDAIRA--THDTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLLH 237
           ++ ++++  G    +          +Y++W Y A  W + N+G R+DHI  SP A     
Sbjct: 180 EALERIRQAGQFSDVARELIPMDEKIYTWWSYRAKDWRAANRGRRLDHIWASPAARDRAL 239

Query: 238 -----SARIDTKPRGWTKPSDHTPVIVSL 261
                + RI    R   KPSDH PV ++L
Sbjct: 240 AGGRDAFRIWEDERSREKPSDHAPVALTL 268


>gi|199597303|ref|ZP_03210734.1| Exonuclease III [Lactobacillus rhamnosus HN001]
 gi|199591819|gb|EDY99894.1| Exonuclease III [Lactobacillus rhamnosus HN001]
          Length = 253

 Score =  170 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 67/258 (25%), Positives = 110/258 (42%), Gaps = 12/258 (4%)

Query: 3   VVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++ + +WNVN +RA +         E + D  CLQETK +      + L     +     
Sbjct: 1   MLKMISWNVNGLRAVLKKDFMTIFNELDADWFCLQETKMQAGQVELD-LPGYYQYFNYAE 59

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G AI +K++P+ +   +   + D + R I   +T                  +  
Sbjct: 60  RKGYSGTAIFTKHKPLNVTYGMGIPEHDTEGRIITLEYTKFYLMTVYTPNSGGELKRLDY 119

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            +         R     +  L  ++PL++ GD N+  +P D  N     ++A FT E R 
Sbjct: 120 RQQ------WDRDFLAYTNELAAKKPLVYCGDLNVAHEPIDLKNDKTNHHNAGFTDEERA 173

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
            F K  N GF D  R  +     YS+W Y+  + + N G RID+ + S      +  A+I
Sbjct: 174 DFTKQLNSGFIDTFRHFYPDTVTYSWWSYHFHARANNAGWRIDYFVASSAFQPYIQDAKI 233

Query: 242 DTKPRGWTKPSDHTPVIV 259
            T+  G    SDH PV +
Sbjct: 234 LTQIMG----SDHCPVEL 247


>gi|320536290|ref|ZP_08036333.1| exodeoxyribonuclease III [Treponema phagedenis F0421]
 gi|320146850|gb|EFW38423.1| exodeoxyribonuclease III [Treponema phagedenis F0421]
          Length = 258

 Score =  170 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 55/256 (21%), Positives = 90/256 (35%), Gaps = 5/256 (1%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++ + +WNVN IRA      A W+   +PDI+CLQE K   +    E L  +        
Sbjct: 1   MLNIISWNVNGIRAVEKKGFADWLYNESPDILCLQEIKARKEQVSGELLAPVWEGGTYKT 60

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
                     S               +D++    E                    +    
Sbjct: 61  FWQPAKRPGYSGTALFTKKEPDNIRIMDLEEFDSEGRVIAADFGKLTVISAYFPNSQDAG 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            +   K+ +      F     +  + +I  GDYNI  +P D  NP   E +  +  E R+
Sbjct: 121 ARLAYKLEFCAAMREFCDNLQKEGQDVILCGDYNIAHKPIDLANPKTNEKNPGYLPEERE 180

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
                   G+ D  R        Y++W Y   +  +N G RID+  ++ +    + S+ I
Sbjct: 181 WMDVFTGAGYVDTFRHFCAEPEHYTWWTYRFKARERNVGWRIDYHCVNEDFLPKVKSSII 240

Query: 242 DTKPRGWTKPSDHTPV 257
                G    SDH P+
Sbjct: 241 LKDVFG----SDHCPI 252


>gi|54022898|ref|YP_117140.1| putative exonuclease [Nocardia farcinica IFM 10152]
 gi|54014406|dbj|BAD55776.1| putative exonuclease [Nocardia farcinica IFM 10152]
          Length = 259

 Score =  170 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 68/262 (25%), Positives = 105/262 (40%), Gaps = 14/262 (5%)

Query: 6   VATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL--NYHIETCGQ 62
           VAT NVN +RA     + AW+     DI+CLQET+  D+        +L   + +     
Sbjct: 5   VATINVNGVRAAAGKGMLAWLAATEADIVCLQETRATDEQTAVALAPALADGWQLAHAEP 64

Query: 63  --KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
             K   GV ILS+  P  +       + D   R++EA F      + + ++Y+  G+  T
Sbjct: 65  GAKGRAGVGILSRRAPDAVRIGFGSSEFDGSGRYLEADFG----EVTVASVYVHSGDAGT 120

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
                 +    +    F +         +  GD+NI     D  N       A F  E R
Sbjct: 121 ----PRQDEKYRFMTEFGAYLKARTGDFVVCGDWNIAHTERDLKNWKGNRKSAGFLPEER 176

Query: 181 QSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
               +L   G+ D +RA H      YS+W Y   ++  + G RID+ +   E       A
Sbjct: 177 AWIDELLAAGYVDVVRALHPDVDGPYSWWSYRGRAFDNDSGWRIDYHLARGELAGRAKQA 236

Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261
            ++  P    + SDH PV V  
Sbjct: 237 VVERAPSYDQRWSDHAPVTVQY 258


>gi|319899428|ref|YP_004159525.1| exodeoxyribonuclease III [Bartonella clarridgeiae 73]
 gi|319403396|emb|CBI76964.1| exodeoxyribonuclease III [Bartonella clarridgeiae 73]
          Length = 272

 Score =  170 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 78/264 (29%), Positives = 121/264 (45%), Gaps = 9/264 (3%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64
           +ATWN+NSIR R+  +  ++   + DI+CLQETK  D  FP E  ++  Y +I   GQKS
Sbjct: 5   IATWNINSIRFRLSQVLQYLDICSVDILCLQETKCSDDLFPREFFEAAGYQYIALNGQKS 64

Query: 65  YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124
           Y+GVAI+S+   + +             R +     ++ + +RI N Y+P G        
Sbjct: 65  YHGVAIISRLPFVSVEKRFFC--HKEDCRHLSVVIELHGRRIRIHNFYIPAGGDEPDVNK 122

Query: 125 DDKISWIKRF---LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180
           ++K      F   +       E     +  GD NI P P D ++          T  E  
Sbjct: 123 NEKFRHKLDFLEEMSSIRADQEDGLESLLLGDLNIAPLPEDVWSHKQLLKVVSHTPIETE 182

Query: 181 QSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHS 238
           +     +  G+ D +R        LY++W Y A  W+  ++G R+DH+  SP   + +  
Sbjct: 183 RLQALCREGGWVDLMRMKFPVPIKLYTWWSYRARDWALADRGRRLDHVWSSPNLAAFVKD 242

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
             I    RGW++PSDH PV    D
Sbjct: 243 LVIFRDARGWSQPSDHVPVQTLFD 266


>gi|169829765|ref|YP_001699923.1| exodeoxyribonuclease [Lysinibacillus sphaericus C3-41]
 gi|168994253|gb|ACA41793.1| Exodeoxyribonuclease [Lysinibacillus sphaericus C3-41]
          Length = 251

 Score =  170 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 63/262 (24%), Positives = 110/262 (41%), Gaps = 13/262 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN IRA +      +  +   D  C+QETK +        L     +     +
Sbjct: 1   MKFISWNVNGIRACLGKGFLDFFHQIEADFFCIQETKCQAGQVEL-ALDGYEQYWNYAQK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K+ P+ +   +  +D   + R I   +        + N+Y P+     + 
Sbjct: 60  KGYSGTAIFTKHTPLSVKYGVGDEDSQDEGRIITLEYE----DFYLVNVYTPNAQRDLAR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +  L    Q L  ++P+++ GD N+     D  N      ++ FT E R  
Sbjct: 116 L--PLRLTWEEHLASYLQDLNSKKPVVYCGDLNVAHTEIDLKNAKSNIGNSGFTYEERAK 173

Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L   GF D+ R  H      +++W Y      +N G RID+ ++S +  + ++ A I
Sbjct: 174 FSELLASGFVDSFRYKHPNETDHFTWWSYMNKVRERNIGWRIDYFIVSEQLKNQINQATI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
                G    SDH P+ + L +
Sbjct: 234 HPHIMG----SDHCPIELQLHV 251


>gi|89902688|ref|YP_525159.1| exodeoxyribonuclease III [Rhodoferax ferrireducens T118]
 gi|89347425|gb|ABD71628.1| exodeoxyribonuclease III [Rhodoferax ferrireducens T118]
          Length = 263

 Score =  170 bits (430), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 69/267 (25%), Positives = 109/267 (40%), Gaps = 12/267 (4%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTE--DKNFPFETLQSLNYHIET 59
           +  + + N+N IR+     L AW+ +  PD IC+QE K +  D    FE L  L  H   
Sbjct: 1   MFKLTSLNLNGIRSATAKGLEAWLTKTQPDCICVQEVKAQALDVQDRFEHLAGLRGHFHF 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GV + S+++P ++         D + R++E  F   +    I + Y P G+  
Sbjct: 61  AEKKGYSGVGLYSRHEPSDVRVGYGSSQFDAEGRYVELRFDTPSAKRSIISCYFPSGSSG 120

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +                 +L+     I  GD NI  Q  D  N      ++ F  E 
Sbjct: 121 EERQQA--KFRFLEEFYLHLAQLKNGREFILCGDVNIAHQEIDLKNWKGNRKNSGFLPEE 178

Query: 180 RQSFQKL-QNMGFTDAIRATHDT--HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
           R    KL    G  D  R    T     Y++W     +++KN G R+D+ + +P   +L 
Sbjct: 179 RAWMTKLLTEAGLVDVYRQLQPTATDEAYTWWSNRGQAYAKNVGWRLDYHLATPAMAALA 238

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263
            S  I        K SDH P+ +  D 
Sbjct: 239 RSETIYKA----EKFSDHAPLTIEYDW 261


>gi|47087383|ref|NP_998586.1| DNA-(apurinic or apyrimidinic site) lyase [Danio rerio]
 gi|33416367|gb|AAH55545.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Danio rerio]
          Length = 310

 Score =  169 bits (429), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 75/262 (28%), Positives = 124/262 (47%), Gaps = 16/262 (6%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQ----SLNYHIE 58
           + + +WNV+ +RA +  N   W+++ +PDI+CLQETK  +K  P +          Y   
Sbjct: 55  MKITSWNVDGLRAWVKKNGLDWVRKEDPDILCLQETKCAEKALPADITAMPEYPHKYWAG 114

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
           +  ++ Y+GVA+L K +P+ +   +  ++ D + R I A F                   
Sbjct: 115 SEDKEGYSGVAMLCKTEPLNVTYGIGKEEHDKEGRVITAEFPDF-----FLVTAYVPNAS 169

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
               + D + +W   F  +    L+  +PL+  GD N+  Q  D  NP     +A FT E
Sbjct: 170 RGLVRLDYRKTWDVDFRAY-LCGLDARKPLVLCGDLNVAHQEIDLKNPKGNRKNAGFTPE 228

Query: 179 VRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
            R+ F +L   GFTD+ R  +    + Y+FW Y  ++ SKN G R+D+ +LS      L 
Sbjct: 229 EREGFTQLLEAGFTDSFRELYPDQAYAYTFWTYMMNARSKNVGWRLDYFVLSSALLPGLC 288

Query: 238 SARIDTKPRGWTKPSDHTPVIV 259
            ++I     G    SDH P+ +
Sbjct: 289 DSKIRNTAMG----SDHCPITL 306


>gi|326402657|ref|YP_004282738.1| exodeoxyribonuclease III [Acidiphilium multivorum AIU301]
 gi|325049518|dbj|BAJ79856.1| exodeoxyribonuclease III [Acidiphilium multivorum AIU301]
          Length = 267

 Score =  169 bits (429), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 82/268 (30%), Positives = 117/268 (43%), Gaps = 6/268 (2%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIET 59
           M+ +TVATWN+NS+R R   L + + +  PDI+CLQETK  D  FP +   +L   H+  
Sbjct: 1   MTALTVATWNINSVRLRRDLLHSLMDQAAPDIVCLQETKVPDDLFPEDLGTALGLPHVLK 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            G K YNGVAILS+     +    P   +    R I A     T  L + N Y+P G  I
Sbjct: 61  RGMKGYNGVAILSRLPLTAVE-DTPDWCMKSDCRHIAARIDTGTDPLVLHNFYVPAGGDI 119

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFA--GDYNIIPQPHDCYNPIIWENDACF-T 176
                + K      F+  A     +  P      GD NI P  +D ++     N      
Sbjct: 120 PDRAENPKYGHKLDFIAEARDHFAMNRPHRTMLVGDLNIAPLENDVWSHKQLLNVVSHTP 179

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSL 235
            E                     D   L+++W Y    W + N+G R+DHI +S +    
Sbjct: 180 PETEGLNAWRTEGFIDAIRHFVPDDQKLFTWWSYRNRDWRASNRGRRLDHIWVSTDLIGN 239

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           L    I    R W + SDH PV+++LD+
Sbjct: 240 LARHAILQDARDWERGSDHVPVVLALDL 267


>gi|269218782|ref|ZP_06162636.1| exodeoxyribonuclease III [Actinomyces sp. oral taxon 848 str.
           F0332]
 gi|269211893|gb|EEZ78233.1| exodeoxyribonuclease III [Actinomyces sp. oral taxon 848 str.
           F0332]
          Length = 265

 Score =  169 bits (429), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 60/268 (22%), Positives = 99/268 (36%), Gaps = 11/268 (4%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + +AT NVN IRA     +  WI     D++ LQE +  ++      L    Y       
Sbjct: 1   MRIATCNVNGIRAAARKGMGEWIASAKADVLLLQEVRAPEELV--APLVGEGYKTIPWPC 58

Query: 63  KSYNG----VAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
           +        VA+    +   +V  + GDD             +    LR+ + YL  G+ 
Sbjct: 59  EIKGRAGVAVAVREGIETGAVVRGV-GDDQPPVDTGRWLEVELPELGLRVVSAYLHSGDS 117

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ--PHDCYNPIIWENDACFT 176
            +  K D K + +    +  ++  E     + AGD+NI+        +            
Sbjct: 118 SSKEKMDAKYAHLDLVEKRLAELSEGGGRFLVAGDFNIVHTPLDITNWKSNHNRTSGVLD 177

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E+    +    MG  D  R         Y++W     ++  N G RID+ + SP     
Sbjct: 178 EEIAYLDRWFGQMGLADVQRRLDPDSQGPYTWWSQRGKAFDNNTGWRIDYHLASPSLAEK 237

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             + RID  P    + SDH P+IV   +
Sbjct: 238 ADAYRIDRAPSYDARFSDHAPLIVDYTL 265


>gi|255263312|ref|ZP_05342654.1| exodeoxyribonuclease III [Thalassiobium sp. R2A62]
 gi|255105647|gb|EET48321.1| exodeoxyribonuclease III [Thalassiobium sp. R2A62]
          Length = 262

 Score =  169 bits (429), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 79/264 (29%), Positives = 117/264 (44%), Gaps = 10/264 (3%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQK 63
           T+ATWN+NS+R R   +   +++  PD++CLQE K+  +  P E   +L Y HI   GQK
Sbjct: 4   TLATWNINSVRLREGIVCDLLEQEAPDVLCLQECKSPVEKIPTERFAALGYSHIVARGQK 63

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            YNGVAILSK           G +                  + I N Y+P G  +   +
Sbjct: 64  GYNGVAILSKLPLE-----DMGSEDFAGLGHARHVAAKLPNGVVIHNHYVPAGGDVPDRE 118

Query: 124 YDDKISWIKRFLRFASQRLE--LEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180
            ++K      +L    +       +  I  GD NI P+  D ++          T  EV 
Sbjct: 119 VNEKFGQKLDYLADMERDFRAAPPKRAILVGDLNIAPREDDVWDHKKLLKIISHTPVEVE 178

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHSA 239
                +    + D  RA      LYS+W Y A  W   +KG R+DH+  + +  +    +
Sbjct: 179 AFNAVMAAGDWVDVTRADIPEGLLYSWWSYRAKDWDAADKGRRLDHVWATSDIAASASGS 238

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
           R+    RGW KPSDH PV  + D+
Sbjct: 239 RVIRYVRGWEKPSDHAPVFATFDL 262


>gi|146279157|ref|YP_001169316.1| exodeoxyribonuclease III Xth [Rhodobacter sphaeroides ATCC 17025]
 gi|145557398|gb|ABP72011.1| exodeoxyribonuclease III Xth [Rhodobacter sphaeroides ATCC 17025]
          Length = 262

 Score =  169 bits (429), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 72/265 (27%), Positives = 109/265 (41%), Gaps = 8/265 (3%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
             T+ATWN+NS+R R   ++  + E  PDI+CLQE K+  +  P E  ++L Y+      
Sbjct: 2   TFTLATWNINSVRLREALVSRLLTEEMPDILCLQECKSPVEKMPLEAFRALGYNWCVARG 61

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           +       +    P+       GD                   + I N Y+P G  I   
Sbjct: 62  QKSYNGVAILSKLPLVD----AGDHDFADLGHARHVSATLGNGVTIHNCYVPAGGDIPDR 117

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL-EV 179
           + + K      +L         + P      GD NI P+  D +N          T  EV
Sbjct: 118 EQNVKFGQKLDYLTRMRDWCRSDTPRKAILVGDLNIAPREDDVWNHKALLKIVSHTPIEV 177

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHS 238
                 ++   + D  R       LYS+W Y +  W   +KG R+DHI  +P+  +  H 
Sbjct: 178 DHLNALMEAGAWIDVTRKDLPEGRLYSWWSYRSPDWEAADKGRRLDHIWATPDIANAAHG 237

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263
           +RI    RGW +PSDH PV  + D+
Sbjct: 238 SRILRAARGWLQPSDHAPVFATFDL 262


>gi|113983|sp|P23196|APEX1_BOVIN RecName: Full=DNA-(apurinic or apyrimidinic site) lyase; AltName:
           Full=APEX nuclease; Short=APEN; AltName:
           Full=Apurinic-apyrimidinic endonuclease 1; Short=AP
           endonuclease 1; AltName: Full=REF-1; AltName: Full=Redox
           factor-1; Contains: RecName: Full=DNA-(apurinic or
           apyrimidinic site) lyase, mitochondrial
 gi|118|emb|CAA40014.1| BAP 1 [Bos taurus]
          Length = 318

 Score =  169 bits (429), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 73/269 (27%), Positives = 126/269 (46%), Gaps = 17/269 (6%)

Query: 2   SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN----YH 56
           + + + +WNV+ +RA I      W+KE  PDI+CLQETK  +   P E  +       Y 
Sbjct: 60  ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPVELQELSGLSHQYW 119

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                ++ Y+GV +LS+  P+++   +  ++ D + R I A +      + +       G
Sbjct: 120 SAPSDKEGYSGVGLLSRQCPLKVSYGIGEEEHDQEGRVIVAEY---DAFVLVTAYVPNAG 176

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
             +   +Y  +     R      + L   +PL+  GD N+  +  D  NP   + +A FT
Sbjct: 177 RGLVRLEYRQRWDEAFRKF---LKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 233

Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E +   + LQ +  TD+ R  +    + Y+FW Y  ++ SKN G R+D+ +LS     
Sbjct: 234 PQERQGFGELLQAVPLTDSFRHLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSQSVLP 293

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            L  ++I +K  G    SDH P+ + L +
Sbjct: 294 ALCDSKIRSKALG----SDHCPITLYLAL 318


>gi|325919691|ref|ZP_08181693.1| exodeoxyribonuclease III [Xanthomonas gardneri ATCC 19865]
 gi|325549799|gb|EGD20651.1| exodeoxyribonuclease III [Xanthomonas gardneri ATCC 19865]
          Length = 266

 Score =  169 bits (429), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 63/273 (23%), Positives = 108/273 (39%), Gaps = 24/273 (8%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + ++N N +R+        W    + D++C+QETK ++            Y       
Sbjct: 1   MRIISFNANGLRSATTKGFFEWFATQDADVLCVQETKAQEHQLAGPKFLPTGYKAWFRDA 60

Query: 62  --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GVAI S+++P E+ T L   + D + R+IEA F      L + + Y+P G+  
Sbjct: 61  STKKGYSGVAIYSRHEPDEVRTALGWPEFDEEGRYIEARFG----NLSVVSFYIPSGS-S 115

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +   K   ++       + L      +  GD+NI+    D  N    + ++      
Sbjct: 116 GELRQGYKFQVMEWLRPILDEWLASGRQYVLCGDWNIVRTALDIKNWKSNQKNSGCLPPE 175

Query: 180 RQSFQKLQN-----------MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
           R     L              G+ D  R  H     Y++W     + + N G RID+ ++
Sbjct: 176 RDWLNGLCADAPEEANAANGRGWVDTYRVLHPQGEDYTWWSNRGAARANNVGWRIDYQLV 235

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           +P     L    I  + R     SDH P IV  
Sbjct: 236 TPWMRDKLQRCAIYREQR----FSDHAPYIVDY 264


>gi|114769839|ref|ZP_01447449.1| exodeoxyribonuclease III, putative [alpha proteobacterium HTCC2255]
 gi|114549544|gb|EAU52426.1| exodeoxyribonuclease III, putative [alpha proteobacterium HTCC2255]
          Length = 262

 Score =  169 bits (428), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 76/265 (28%), Positives = 119/265 (44%), Gaps = 10/265 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62
           + V +WN+NS+R R  ++   + E  PD++CLQE K+ +   P E    L Y ++   GQ
Sbjct: 3   IKVCSWNINSVRLREDSVCRLLSEETPDVLCLQECKSPEDKIPTEKFSKLGYKYLIASGQ 62

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K YNGVAILS+    EI           +   +     +N     +     P G  I   
Sbjct: 63  KGYNGVAILSRLPLKEIARRDFASLEHARHIAVNVDNKLNIHNFYV-----PAGGDIPDR 117

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL-EV 179
             ++K      +L   ++  + ++P      GD NI P   D ++          T  E+
Sbjct: 118 NINEKFGQKLDYLSEMAEYFQSQKPQKSILVGDLNIAPGEEDVWDHKKLLKIVSHTPQEI 177

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLLHS 238
           +   + + +  + D IR    +  LYS+W Y A  W   NKG R+DHI  + +     + 
Sbjct: 178 QALNEVMLSANWVDIIRKDIPSGLLYSWWSYRARDWDTANKGRRLDHIWATKDIADKGYG 237

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263
           + I    RGW KPSDH P+  S D+
Sbjct: 238 SYISRDVRGWEKPSDHAPIFSSFDL 262


>gi|300780401|ref|ZP_07090257.1| possible exodeoxyribonuclease III [Corynebacterium genitalium ATCC
           33030]
 gi|300534511|gb|EFK55570.1| possible exodeoxyribonuclease III [Corynebacterium genitalium ATCC
           33030]
          Length = 260

 Score =  169 bits (428), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 73/265 (27%), Positives = 120/265 (45%), Gaps = 19/265 (7%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + VATWN+NS+R RI    A+++ N+ D++ +QETK  D  FP+   ++  Y +   G  
Sbjct: 1   MRVATWNINSVRTRIDRAVAFLERNDVDVLAMQETKCSDDKFPYSAFEAAGYDVAHVGYH 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-----TQTLRIGNLYLPHGNP 118
            +NGVAI+S+     +     G     +                   + + +LY+P+G  
Sbjct: 61  QWNGVAIISRVGLENVRDGFDGQPGFNKEPDAPQDREARAVAATCGGVEVWSLYVPNGRE 120

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
           I    YD K+ ++ R     +++++   P +F GDYNI P   D ++   +E     T  
Sbjct: 121 IGDRHYDYKLEFLWR----LAEQIDPSTPQVFCGDYNIAPTDKDVWDRAFFEGKTHVTEP 176

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
            R +F+ L   G   A          YS+WDY    + K +G+ ID  +          +
Sbjct: 177 ERAAFEALLEAGLNQAT-----HPEPYSYWDYKGMRFQKGEGMLIDFQL--SGLEG---A 226

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263
             +DT  R     SDH PV+V  D+
Sbjct: 227 GFVDTHEREGKGTSDHAPVVVDYDL 251


>gi|241206774|ref|YP_002977870.1| exodeoxyribonuclease III Xth [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240860664|gb|ACS58331.1| exodeoxyribonuclease III Xth [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 267

 Score =  169 bits (428), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 76/264 (28%), Positives = 112/264 (42%), Gaps = 9/264 (3%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64
           + TWN+NS+R R+  +   + ++ PDI+CLQETK  +  FP   L++L Y HI   GQK 
Sbjct: 5   ITTWNINSVRLRMPIVEQLVLKHRPDILCLQETKVTNDLFPAAPLRALGYTHIIIHGQKG 64

Query: 65  YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124
           Y+GVAI S+    E          D +            + +R+ N Y+P G        
Sbjct: 65  YHGVAIASRIPLTEDHRQDYCGVGDARHISAIFERG--NRRVRLHNFYVPAGGDEPDRTI 122

Query: 125 DDKISWIKRFLRFASQRLELEEPLI---FAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
           + K      F+          E        GD NI P  HD ++          T    +
Sbjct: 123 NPKFGHKLDFIEEMKLLKANGEANTSAILVGDLNIAPLEHDVWSHKQLLKIVSHTPVETE 182

Query: 182 SFQKLQNMGFTDAIRATH--DTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHS 238
              ++   G    +   H   +  LY++W Y A  W   ++G R+DHI  S +    L  
Sbjct: 183 GLLEVMKRGAWLDLMRQHVPASEKLYTWWSYRAKDWEAADRGRRLDHIWSSSDLGPHLKR 242

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
             I  + RGW +PSDH PV    D
Sbjct: 243 IEILKEARGWDRPSDHVPVTAHFD 266


>gi|15836769|ref|NP_297457.1| exodeoxyribonuclease [Xylella fastidiosa 9a5c]
 gi|9104958|gb|AAF82977.1|AE003870_3 exodeoxyribonuclease [Xylella fastidiosa 9a5c]
          Length = 266

 Score =  169 bits (428), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 43/270 (15%), Positives = 83/270 (30%), Gaps = 18/270 (6%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + ++++N N +R+ +      W    + D++C+QETK + +           YH+     
Sbjct: 1   MRISSFNANGLRSALSKGFFDWFSTQDIDVLCVQETKAQRQQLVGPDFFPAGYHVCFRDA 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
            +  G + ++ Y   E                             +   +          
Sbjct: 61  TTKKGYSGVAIYSRCEPDELRTTLGWAEFDEEGRYVEARFGNLSVV--SFYIPSGSSGEQ 118

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +   K   ++       + L      +  GD+NI+    D  N    + ++      R  
Sbjct: 119 RQHYKFEVMRWLRPILCEWLLSGRDYVLCGDWNIVRSALDIRNWKSNQKNSGCLPLERDW 178

Query: 183 FQKLQNMG-----------FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
              L               + D  R  +     Y++W     +   N G RID+  +SP 
Sbjct: 179 LNGLCADSLHEVNAAQGRGWVDTYRVLYPQGEDYTWWSNRGAARVNNVGWRIDYQFVSPG 238

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
               +    I  + R     SDH P  V  
Sbjct: 239 LRERVSRCAIYREQR----FSDHAPYTVEY 264


>gi|315104061|gb|EFT76037.1| exodeoxyribonuclease III [Propionibacterium acnes HL050PA2]
          Length = 297

 Score =  169 bits (428), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 59/297 (19%), Positives = 107/297 (36%), Gaps = 37/297 (12%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + +A++N+N IRA +    + W++  + D+I LQE +    + P       +        
Sbjct: 1   MRIASFNINGIRAALKRGFSEWMEARDCDVIGLQEVRCRPADLPEGAFGDRHVSWAPGSL 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDL------------------------DVQARFIEAT 98
              NG+A+L++  P E+ +      +                                  
Sbjct: 61  AGRNGLALLTRTAPAEVRSWGTHLVMTPGQAPTPAQVLTGNTNGLPTELLPFADEGRYIE 120

Query: 99  FTINTQTLRIGNLYLPHGNPITS----------TKYDDKISWIKRFLRFASQRLELEEPL 148
             +    L +  LYLP G                K      +    +R   +        
Sbjct: 121 VDLADTPLTVACLYLPKGATPDPANEKAIAKQDRKMAFLAGFRDHLVRRRQECTAQGRHF 180

Query: 149 IFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL--QNMGFTDAIRATHDTHHLYS 206
           +  GD+NI  +  D  N    +++  F  E RQ F  +   +           DT+  YS
Sbjct: 181 LVMGDFNIAHENADLKNWKANQHNEGFLPEERQWFDTILSPDTLIDVVRAQHPDTNGPYS 240

Query: 207 FWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +W +   ++  + G RID+ + SPE  S   ++ ID  P    + SDH  V++  D+
Sbjct: 241 WWSWRGKAFVNDAGWRIDYHLASPELASKAITSEIDRDPSYSERTSDHAAVVIDYDL 297


>gi|297157838|gb|ADI07550.1| putative exodeoxyribonuclease III [Streptomyces bingchenggensis
           BCW-1]
          Length = 265

 Score =  169 bits (428), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 51/264 (19%), Positives = 92/264 (34%), Gaps = 6/264 (2%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++TV T NVN +RA        W+     D++CLQE + E         +   +H     
Sbjct: 1   MLTVTTVNVNGLRAAAKKGFLPWLGGTAADVVCLQEVRAEPGELTAPVREPDGWHTVHAP 60

Query: 62  --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
              K   GVA+ ++ +P  +       + D   R++E      T    +       G   
Sbjct: 61  ADTKGRAGVAVYTRREPEGVRVGFGSAEFDGSGRYLEVDLPGVTVA-SLYLPSGEVGTER 119

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K      ++        +       ++  GD+NI  +  D  N       + F  E 
Sbjct: 120 QEEKERFMGEFLPYLKELRERAAAGGREVLVCGDWNIAHREADIKNWKANRKKSGFLPEE 179

Query: 180 RQSFQKLQNMGFTDAIRA--THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
           R    ++ +      +      D    YS+W Y   ++  + G RID ++ +        
Sbjct: 180 RAWLSRVYDEAAYVDVVRKLHPDAEGPYSWWSYRGRAFDNDAGWRIDLLVGTQGLAERAV 239

Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261
            A+++       + SDH PV    
Sbjct: 240 KAQVERAASYDQRWSDHAPVTAVF 263


>gi|317374848|sp|A0MTA1|APEX1_DANRE RecName: Full=DNA-(apurinic or apyrimidinic site) lyase; AltName:
           Full=APEX nuclease; Short=APEN; AltName:
           Full=Apurinic-apyrimidinic endonuclease 1; Short=AP
           endonuclease 1; Short=zAP1
 gi|117549778|gb|ABK35081.1| apurinic/apyrimidinic endonuclease 1 [Danio rerio]
 gi|117549788|gb|ABK35082.1| apurinic/apyrimidinic endonuclease 1 [Danio rerio]
 gi|117549790|gb|ABK35083.1| apurinic/apyrimidinic endonuclease 1 [Danio rerio]
 gi|117549792|gb|ABK35084.1| apurinic/apyrimidinic endonuclease 1 [Danio rerio]
          Length = 310

 Score =  169 bits (428), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 75/262 (28%), Positives = 124/262 (47%), Gaps = 16/262 (6%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQ----SLNYHIE 58
           + + +WNV+ +RA +  N   W+++ +PDI+CLQETK  +K  P +          Y   
Sbjct: 55  MKITSWNVDGLRAWVKKNGLDWVRKEDPDILCLQETKCAEKALPADITGMPEYPHKYWAG 114

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
           +  ++ Y+GVA+L K +P+ +   +  ++ D + R I A F                   
Sbjct: 115 SEDKEGYSGVAMLCKTEPLNVTYGIGKEEHDKEGRVITAEFPDF-----FLVTAYVPNAS 169

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
               + D + +W   F  +    L+  +PL+  GD N+  Q  D  NP     +A FT E
Sbjct: 170 RGLVRLDYRKTWDVDFRAY-LCGLDARKPLVLCGDLNVAHQEIDLKNPKGNRKNAGFTPE 228

Query: 179 VRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
            R+ F +L   GFTD+ R  +    + Y+FW Y  ++ SKN G R+D+ +LS      L 
Sbjct: 229 EREGFTQLLEAGFTDSFRELYPDQAYAYTFWTYMMNARSKNVGWRLDYFVLSSALLPGLC 288

Query: 238 SARIDTKPRGWTKPSDHTPVIV 259
            ++I     G    SDH P+ +
Sbjct: 289 DSKIRNTAMG----SDHCPITL 306


>gi|55962497|emb|CAI11781.1| novel protein (zgc:66204) [Danio rerio]
          Length = 310

 Score =  169 bits (428), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 75/262 (28%), Positives = 124/262 (47%), Gaps = 16/262 (6%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQ----SLNYHIE 58
           + + +WNV+ +RA +  N   W+++ +PDI+CLQETK  +K  P +          Y   
Sbjct: 55  MKITSWNVDGLRAWVKKNGLDWVRKEDPDILCLQETKCAEKALPADITGMPEYPHKYWAG 114

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
           +  ++ Y+GVA+L K +P+ +   +  ++ D + R I A F                   
Sbjct: 115 SEDKEGYSGVAMLCKTEPLNVTYGIGKEEHDKEGRVITAEFPDF-----FLVTAYVPNAS 169

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
               + D + +W   F  +    L+  +PL+  GD N+  Q  D  NP     +A FT E
Sbjct: 170 RGLVRLDYRKTWDVDFRAY-LCGLDARKPLVLCGDLNVAHQEIDLKNPKGNRKNAGFTPE 228

Query: 179 VRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
            R+ F +L   GFTD+ R  +    + Y+FW Y  ++ SKN G R+D+ +LS      L 
Sbjct: 229 EREGFTQLLEAGFTDSFRELYPDQAYAYTFWTYMMNARSKNVGWRLDYFVLSSALLPGLC 288

Query: 238 SARIDTKPRGWTKPSDHTPVIV 259
            ++I     G    SDH P+ +
Sbjct: 289 DSKIRNTAMG----SDHCPITL 306


>gi|149922823|ref|ZP_01911246.1| exodeoxyribonuclease III [Plesiocystis pacifica SIR-1]
 gi|149816290|gb|EDM75794.1| exodeoxyribonuclease III [Plesiocystis pacifica SIR-1]
          Length = 280

 Score =  169 bits (428), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 60/263 (22%), Positives = 105/263 (39%), Gaps = 11/263 (4%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC-- 60
           +TV +WN+N +RA       AW+ E   DI+ +QE +   +     T +   +H      
Sbjct: 18  LTVLSWNINGLRAAAKKGFGAWLAECGGDIVGVQEIRAFKEQLDDATAEPEGWHSHFRSA 77

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPI 119
            +  Y+GV + S+    ++   L     D + R   A F  +    +        +G   
Sbjct: 78  VRPGYSGVGLYSRAPADKVEVELGEARFDDEGRVQLARFGRLFVANVYF---PNGNGRDR 134

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
            +++   K+ + +       ++      ++  GD+N   +  D   P      + F  E 
Sbjct: 135 DNSRVPYKLDFYRAVFELVERKRRGGYRVLVMGDFNTAHEAIDLARPKQNVKTSGFLPEE 194

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R+   +    G+ D  R+       YS+W     +  +N G RID+++ SP     L  A
Sbjct: 195 REELDRWIRAGWIDTFRSLEPGPGHYSWWSQRGTARERNVGWRIDYVLASPNVEPFLREA 254

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
            I  +  G    SDH PV V LD
Sbjct: 255 FIWPEVPG----SDHCPVGVRLD 273


>gi|116254288|ref|YP_770126.1| exodeoxyribonuclease III [Rhizobium leguminosarum bv. viciae 3841]
 gi|115258936|emb|CAK10045.1| putative exodeoxyribonuclease III [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 267

 Score =  169 bits (428), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 75/264 (28%), Positives = 112/264 (42%), Gaps = 9/264 (3%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64
           + TWN+NS+R R+  +   + ++ PDI+CLQETK  +  FP   L+++ Y HI   GQK 
Sbjct: 5   ITTWNINSVRLRMPIVEQLVLKHRPDILCLQETKVTNDLFPAAPLRAMGYNHIIIHGQKG 64

Query: 65  YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124
           Y+GVAI S+    E          D +            + +R+ N Y+P G        
Sbjct: 65  YHGVAIASRIPLAEDHRQDYCGVGDARHISAIFEHG--NRRVRLHNFYVPAGGDEPDRTI 122

Query: 125 DDKISWIKRFLRFASQRLELEEPLI---FAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
           + K      F+          E        GD NI P  HD ++          T    +
Sbjct: 123 NPKFGHKLDFIEEMKLLKANGEANTSAILVGDLNIAPLEHDVWSHKQLLKIVSHTPVETE 182

Query: 182 SFQKLQNMGFTDAIRATH--DTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHS 238
              ++   G    +   H  +   LY++W Y A  W   ++G R+DHI  S +    L  
Sbjct: 183 GLLEVMKRGAWLDLMRQHVPENEKLYTWWSYRAKDWEAADRGRRLDHIWSSSDLGPHLKR 242

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
             I  + RGW +PSDH PV    D
Sbjct: 243 IEILKEARGWDRPSDHVPVTAHFD 266


>gi|118470089|ref|YP_886033.1| exodeoxyribonuclease III [Mycobacterium smegmatis str. MC2 155]
 gi|118171376|gb|ABK72272.1| exodeoxyribonuclease III [Mycobacterium smegmatis str. MC2 155]
          Length = 273

 Score =  169 bits (428), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 71/271 (26%), Positives = 117/271 (43%), Gaps = 17/271 (6%)

Query: 3   VVTVATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKNF--PFETLQSL 53
            +TV T NVN  RA           + AW+K+   D+IC+QET+ ED      FET  + 
Sbjct: 6   TLTVTTINVNGARAACKERSTENLGMLAWLKQTRADVICMQETRCEDDQLAATFETAFAD 65

Query: 54  NYHIETCGQKS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
            +H+ +   +    NGVA+LS+    +I      ++ D   R+IE         + + ++
Sbjct: 66  GWHLASAPSERKGRNGVAVLSRTPFDDIRIGCGAEEFDTHGRWIEVDTAG----ITVVSV 121

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
           Y+P G   T  + + +        R A  +   +   +  GD+NI    +D  N      
Sbjct: 122 YVPTGEAETERQLEKERFMAGVSKRMAQLQAG-DREALVCGDWNIGHTENDIKNWKGNVK 180

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230
            + F  E R     L   G+ DA+R  H D    YS+W +   ++  + G RID+ +++P
Sbjct: 181 KSGFLPEERAWVSGLLASGWVDAVRQLHGDVPGPYSWWSWRGKAFDNDAGWRIDYHLVTP 240

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
                L +   +       + SDH PV V  
Sbjct: 241 GLAGRLVAGGTERPEAYALRWSDHAPVTVEF 271


>gi|257457966|ref|ZP_05623125.1| exodeoxyribonuclease III [Treponema vincentii ATCC 35580]
 gi|257444679|gb|EEV19763.1| exodeoxyribonuclease III [Treponema vincentii ATCC 35580]
          Length = 258

 Score =  169 bits (428), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 57/260 (21%), Positives = 91/260 (35%), Gaps = 5/260 (1%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + +V +WNVN IRA        W+   +PD++CLQETK   +  P E +           
Sbjct: 1   MTSVISWNVNGIRAAQKKGFLEWLYTESPDVLCLQETKARKEQLPSELITPAWKEGTYKT 60

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
                     S          L    +++ A   E    +               +    
Sbjct: 61  YWQAAKKPGYSGTAVFCKKEPLNIRTMNLPAFDDEGRVLVADFDTVSVISAYFPNSQEGG 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            +   K+ +    L F +   +    ++  GDYNI  +P D  NP   E +  +  E R 
Sbjct: 121 ARLGYKLDFCAAMLEFCNALQKDGRHIVLCGDYNIAHKPIDLANPKSNEQNPGYLPEERA 180

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
                   G+ D  R      H Y++W Y   +  KN G RID+  +       +  + I
Sbjct: 181 WMDTFTQAGYIDTFRHFCAEPHRYTWWSYRFHAREKNIGWRIDYHCVDNAFLPNIRESSI 240

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
                G    SDH P+ +  
Sbjct: 241 MADVLG----SDHCPIKLVY 256


>gi|308233639|ref|ZP_07664376.1| exodeoxyribonuclease III Xth [Atopobium vaginae DSM 15829]
 gi|328944401|ref|ZP_08241863.1| exodeoxyribonuclease III [Atopobium vaginae DSM 15829]
 gi|327490985|gb|EGF22762.1| exodeoxyribonuclease III [Atopobium vaginae DSM 15829]
          Length = 259

 Score =  169 bits (427), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 69/263 (26%), Positives = 111/263 (42%), Gaps = 15/263 (5%)

Query: 5   TVATWNVNSIRARIHN---LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
              +WNVN +RA +             N DI  +QETK +      + L           
Sbjct: 8   RFVSWNVNGLRATLKKEPSFLEIFSTLNADIFAIQETKLQAGQVDLD-LDGYTQTWSYAE 66

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G A+ S+ +P+  +  +     D + R     F          ++Y P+     +
Sbjct: 67  RKGYSGTAVFSREKPLSTIHTIGCKAADNEGRVCALEFE----KFWFVDVYTPNSKNELA 122

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
              +       +  R     L+ ++P+I  GD+N+  Q  D  NP     +A F+ E R 
Sbjct: 123 RLDER--MEWDKAYREFLVGLDAQKPVITCGDFNVAHQEIDLKNPASNHENAGFSDEERA 180

Query: 182 SFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            F  L   GFTD  R+ H T    YS+W Y   S  +N G RID+ ++S    + + S+ 
Sbjct: 181 GFSSLLGAGFTDTFRSAHPTLEGAYSWWSYRMRSRERNAGWRIDYFLVSNRIANTVTSSA 240

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263
           I  +  G    SDH PV + L++
Sbjct: 241 IYNEIYG----SDHCPVGLELEL 259


>gi|331699058|ref|YP_004335297.1| exodeoxyribonuclease III Xth [Pseudonocardia dioxanivorans CB1190]
 gi|326953747|gb|AEA27444.1| exodeoxyribonuclease III Xth [Pseudonocardia dioxanivorans CB1190]
          Length = 268

 Score =  169 bits (427), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 60/267 (22%), Positives = 107/267 (40%), Gaps = 9/267 (3%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETL---QSLNYH-- 56
           ++TV++ NVN IRA     L AW+   + D++CLQET+   ++ P E L   +   +   
Sbjct: 1   MLTVSSVNVNGIRAAAPKGLTAWLAATDADVVCLQETRARHEDLPDELLGVLERAGWLLT 60

Query: 57  -IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
              +   +   GV +L++  P  +   +   +     R++E      T    +       
Sbjct: 61  LAPSDAAQGRAGVGVLTRVAPEAVRVGIDAAEGAAAGRYVEVDLPGLTVA-SLYLPNGTV 119

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
           G P    K     ++         +    +  ++  GD+NI     D  N      ++ F
Sbjct: 120 GTPRQDEKDRFLAAFAPYLAERREKAAAEDREVVVCGDWNIAHTEADIRNWRGNVRNSGF 179

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
               R    +L   G+ D +R+ H      YS+W Y   ++  + G RID  + +    +
Sbjct: 180 LPHERAWLGELYGSGWVDVVRSLHPGVDGPYSWWSYRGRAFDNDTGWRIDLHVATAGLAA 239

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261
              SA ++  P    + SDH PV V  
Sbjct: 240 RASSAVVERAPSHAERWSDHAPVTVRY 266


>gi|300743782|ref|ZP_07072802.1| exodeoxyribonuclease III [Rothia dentocariosa M567]
 gi|300380143|gb|EFJ76706.1| exodeoxyribonuclease III [Rothia dentocariosa M567]
          Length = 275

 Score =  169 bits (427), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 67/274 (24%), Positives = 112/274 (40%), Gaps = 17/274 (6%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC-- 60
           + VA+ NVN IRA    ++A W+   + DI+CLQE +  DK    E L   +++I     
Sbjct: 1   MRVASVNVNGIRAAYRKDMATWLAGRDVDILCLQEVRAPDK-IVRELLNEDDWNILHAEA 59

Query: 61  -----------GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
                       +K  N    L K QP+   + +  D      R++EA +T+ T      
Sbjct: 60  AAKGRAGVLVATRKHPNANGELLKNQPVATRSTIGEDYFADAGRWVEADYTLPTGETLTV 119

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
                H   + + + DDK  ++ R L    +  +  + ++  GD N+     D  N    
Sbjct: 120 VSAYVHSGEVGTPRQDDKYRFLDRMLVRLPELAQHSDHVLIVGDLNVGHTELDIKNWKAN 179

Query: 170 ENDACFTLEVRQSFQKLQNM--GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227
           +  A F  E R  F K          A +   +    Y++W Y   ++  + G RID+ M
Sbjct: 180 QKRAGFLPEERAYFDKFFGEIGYEDVARKLAGEVPGPYTWWSYRGKAFDNDAGWRIDYHM 239

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
            +P   +    A +D       + SDH P++V  
Sbjct: 240 ATPALAAKAVEATVDRAASYDERFSDHAPLVVDY 273


>gi|311113023|ref|YP_003984245.1| exodeoxyribonuclease III [Rothia dentocariosa ATCC 17931]
 gi|310944517|gb|ADP40811.1| exodeoxyribonuclease III [Rothia dentocariosa ATCC 17931]
          Length = 282

 Score =  169 bits (427), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 67/276 (24%), Positives = 112/276 (40%), Gaps = 17/276 (6%)

Query: 2   SVVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
             + VA+ NVN IRA    ++A W+   + DI+CLQE +  DK    E L   +++I   
Sbjct: 6   KTLRVASVNVNGIRAAYRKDMATWLAGRDVDILCLQEVRAPDK-IVRELLNEDDWNILHA 64

Query: 61  -------------GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107
                         +K  N    L K QP+   + +  D      R++EA +T+ T    
Sbjct: 65  EAAAKGRAGVLVATRKHPNANGELLKNQPVATRSTIGEDYFADAGRWVEADYTLPTGETL 124

Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167
                  H   + + + DDK  ++ R L    +  +  + ++  GD N+     D  N  
Sbjct: 125 TVVSAYVHSGEVGTPRQDDKYRFLDRMLVRLPELAQHSDHVLIVGDLNVGHTELDIKNWK 184

Query: 168 IWENDACFTLEVRQSFQKLQNM--GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225
             +  A F  E R  F K          A +   +    Y++W Y   ++  + G RID+
Sbjct: 185 ANQKRAGFLPEERAYFDKFFGEIGYEDVARKLAGEVPGPYTWWSYRGKAFDNDAGWRIDY 244

Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
            M +P   +    A +D       + SDH P++V  
Sbjct: 245 HMATPALAAKAVEATVDRAASYDERFSDHAPLVVDY 280


>gi|108798182|ref|YP_638379.1| exodeoxyribonuclease III (xth) [Mycobacterium sp. MCS]
 gi|119867278|ref|YP_937230.1| exodeoxyribonuclease III Xth [Mycobacterium sp. KMS]
 gi|108768601|gb|ABG07323.1| exodeoxyribonuclease III (xth) [Mycobacterium sp. MCS]
 gi|119693367|gb|ABL90440.1| exodeoxyribonuclease III Xth [Mycobacterium sp. KMS]
          Length = 263

 Score =  169 bits (427), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 65/270 (24%), Positives = 108/270 (40%), Gaps = 20/270 (7%)

Query: 4   VTVATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKNFPFETLQSL--N 54
           + V+T NVN IRA +         L AW+KE + D++CLQET+ +D         +L   
Sbjct: 1   MIVSTINVNGIRAAVKQRSTENLGLLAWLKETSADVVCLQETRADDDQLADALAPALADG 60

Query: 55  YH--IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           +H    +   K  NGVA+LS++   E       +  +        T  +   ++ +    
Sbjct: 61  WHLASASPHLKGRNGVAVLSRHAVTEHRRMESEEFGEHGRYLEVDTGGLTVASVYVQTGE 120

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                 +   ++   ++     +R            +  GD+NI    +D  N       
Sbjct: 121 AETDRQLEKERFMAALAMRMAEIR--------GTDAVVCGDWNIAHTENDIKNWKGNVKK 172

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
           + F    RQ    L   G+ D +RA H      YS+W +   ++  + G RID+ + SP 
Sbjct: 173 SGFLPSERQWLTDLLGTGWVDVVRALHPDVAGPYSWWSWRGRAFDNDAGWRIDYQLASPS 232

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
                H AR++       + SDH PV V  
Sbjct: 233 LAPRAHIARVERADAYALRWSDHAPVTVEY 262


>gi|126433840|ref|YP_001069531.1| exodeoxyribonuclease III Xth [Mycobacterium sp. JLS]
 gi|126233640|gb|ABN97040.1| exodeoxyribonuclease III Xth [Mycobacterium sp. JLS]
          Length = 263

 Score =  169 bits (427), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 66/270 (24%), Positives = 108/270 (40%), Gaps = 20/270 (7%)

Query: 4   VTVATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKNFPFETLQSL--N 54
           + V+T NVN IRA +         L AW+KE + D++CLQET+ +D         +L   
Sbjct: 1   MIVSTINVNGIRAAVKQRSTENLGLLAWLKETSADVVCLQETRADDDQLADALAPALADG 60

Query: 55  YH--IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           +H    +   K  NGVA+LS++   E       +  D        T  +   ++ +    
Sbjct: 61  WHLASASPHLKGRNGVAVLSRHAVTEHRRMESEEFGDHGRYLEVDTGGLTVASVYVQTGE 120

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                 +   ++   ++     +R            +  GD+NI    +D  N       
Sbjct: 121 AETDRQLEKERFMAALATRMAEIR--------GTDAVVCGDWNIAHTENDIKNWKGNVKK 172

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
           + F    RQ    L   G+ D +RA H      YS+W +   ++  + G RID+ + SP 
Sbjct: 173 SGFLPSERQWLTDLLGTGWVDVVRALHPDVAGPYSWWSWRGRAFDNDAGWRIDYQLASPS 232

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
                H AR++       + SDH PV V  
Sbjct: 233 LAPRAHIARVERADAYALRWSDHAPVTVEY 262


>gi|74316272|ref|YP_314012.1| DNA-(apurinic or apyrimidinic site) lyase [Thiobacillus
           denitrificans ATCC 25259]
 gi|74055767|gb|AAZ96207.1| DNA-(apurinic or apyrimidinic site) lyase [Thiobacillus
           denitrificans ATCC 25259]
          Length = 259

 Score =  169 bits (427), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 67/265 (25%), Positives = 117/265 (44%), Gaps = 15/265 (5%)

Query: 4   VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETC 60
           + + + N+N IR A       W+     D++C+QE K +  +   E  Q           
Sbjct: 1   MRIISANLNGIRSAATKGFFDWLPTQGADVVCVQELKAQATDLKPEVRQCDGLSGAFHCA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GV + ++  P  IV  L   + D + R+IEA +      L + +LY P G+   
Sbjct: 61  EKKGYSGVGVYTRQAPQRIVEGLGLPEFDAEGRYIEADYG----DLAVISLYQPSGSSSE 116

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   K  ++  F     + ++    +I  GD+NI  Q  D  N    + ++ F  E R
Sbjct: 117 ERQQA-KFRFLDAFFPHLEKLVKCGREIIICGDWNIAHQEIDLKNWKSNQKNSGFLPEER 175

Query: 181 QSFQK-LQNMGFTDAIRATHDTH--HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
               +    +G+ D  R+ +  H    Y++W     +W+KN G RID+ + +P   +   
Sbjct: 176 AWMTRLFDELGWVDVYRSLYPAHTGEAYTWWSNRGQAWAKNVGWRIDYQIATPGIAAKAR 235

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLD 262
           SA +  + R     SDH P++V  D
Sbjct: 236 SAFVYKEQR----FSDHAPLVVDYD 256


>gi|332179140|gb|AEE14829.1| exodeoxyribonuclease III Xth [Thermodesulfobium narugense DSM
           14796]
          Length = 254

 Score =  169 bits (427), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 75/261 (28%), Positives = 130/261 (49%), Gaps = 10/261 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + T+NVNSIR+R   +   I+++NP+II LQE K     FP        Y     G+K
Sbjct: 1   MIITTFNVNSIRSRTDIVNLLIEKHNPEIIALQEIKCTPDLFPNLAFPD--YKCLVSGEK 58

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           SYNGVA+ +K                 ++ F++           + N+Y PHG+   + K
Sbjct: 59  SYNGVAVCTKLDSSHFENEFQDTVNQKRSLFVKFEN------FILMNIYFPHGDLRGTDK 112

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K+ + K+ L F  +     +P+I  GD+N+     D Y+P I ++      E R++ 
Sbjct: 113 FYYKLDFYKKLLAFLKENFTPNDPIIMLGDFNVALTDFDVYDPQILKDTIGTMPEERKAL 172

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           ++L N GF D  R  H     +++++Y      KNKG+RID+I+++    + + +  +D 
Sbjct: 173 RELLNYGFIDTYRHLHPNDPGFTWFNYIGGDIWKNKGMRIDYILVTKPLINKVKNVEVDL 232

Query: 244 KPRGW--TKPSDHTPVIVSLD 262
             R     KPSDH P+++ ++
Sbjct: 233 SLRKRRTPKPSDHAPLVMEIN 253


>gi|254420582|ref|ZP_05034306.1| exodeoxyribonuclease III (xth) subfamily [Brevundimonas sp. BAL3]
 gi|196186759|gb|EDX81735.1| exodeoxyribonuclease III (xth) subfamily [Brevundimonas sp. BAL3]
          Length = 265

 Score =  169 bits (427), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 79/270 (29%), Positives = 117/270 (43%), Gaps = 15/270 (5%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCG 61
            + +ATWN+NS+R RI  +A ++ E  PD++ LQE K     FP    + +   H+   G
Sbjct: 2   TLRLATWNINSVRLRIDQVARFVAERAPDVLLLQEIKCTTDQFPRAAFEDMGMPHLRVAG 61

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           QK ++GVAI S+    +  T        V         +     + + N Y+P G  +  
Sbjct: 62  QKGWHGVAIASRLPLEDSDT------FQVCKLGHARCVSAQVAGIDVQNFYIPAGGDVPD 115

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLI---FAGDYNIIPQPHDCYNPIIWENDACFTL- 177
              + K      F    +  +  ++       AGD+NI P   D +N          T  
Sbjct: 116 RTLNPKFDHKMDFYEQLTAIVARQDKSRPLVMAGDFNIAPGEGDVFNHRYMSKIVSHTPI 175

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLY-SFWDYYADSWSK-NKGIRIDHIMLSPEATSL 235
           EV    +     GF D +R          S+W Y A  + K N+G+R+DHI  SP  T  
Sbjct: 176 EVETLNRLQATGGFADVLRDRFPEPQKLASWWSYRAADFRKSNRGLRLDHIWTSPGLTPA 235

Query: 236 LHS--ARIDTKPRGWTKPSDHTPVIVSLDI 263
           +    ARI    R W +PSDH PV V LD+
Sbjct: 236 VAKDTARIHDDVREWDRPSDHAPVTVDLDV 265


>gi|325294131|ref|YP_004279995.1| exodeoxyribonuclease III [Agrobacterium sp. H13-3]
 gi|325061984|gb|ADY65675.1| exodeoxyribonuclease III [Agrobacterium sp. H13-3]
          Length = 267

 Score =  169 bits (427), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 76/263 (28%), Positives = 112/263 (42%), Gaps = 9/263 (3%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64
           + TWN+NS+R R+  +  ++    PDI+CLQETK  +  FP + L++L Y H+   GQK 
Sbjct: 5   ITTWNINSVRLRMPIVEQFLVRYKPDILCLQETKCPNGEFPMKPLKALGYEHVIIHGQKG 64

Query: 65  YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124
           Y+GVAI SK    E             AR I A F + ++ +R+ N Y+P G        
Sbjct: 65  YHGVAIASKIPLTEDHR--QDYCGIGDARHISAIFQVGSRRIRLHNFYVPAGGDEPDRSI 122

Query: 125 DDKISWIKRFLRFASQRL---ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR- 180
           + K      F+                I  GD NI P  +D ++          T     
Sbjct: 123 NPKFGHKLDFIEEMKALRADGVPGTSSILVGDLNIAPLENDVWSHKQLLKIVSHTPVETD 182

Query: 181 -QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHS 238
                  +            D+  +Y++W Y A  W   ++G R+DHI  S +    L  
Sbjct: 183 GMLDIMKKGNWLDLMRLNVPDSEKIYTWWSYRAKDWEAADRGRRLDHIWSSQDLGPSLEK 242

Query: 239 ARIDTKPRGWTKPSDHTPVIVSL 261
             I  + RGW +PSDH PV    
Sbjct: 243 IDILREARGWNRPSDHVPVTAHF 265


>gi|77464426|ref|YP_353930.1| exodeoxyribonuclease III [Rhodobacter sphaeroides 2.4.1]
 gi|221640316|ref|YP_002526578.1| Exodeoxyribonuclease III Xth [Rhodobacter sphaeroides KD131]
 gi|77388844|gb|ABA80029.1| Exodeoxyribonuclease III [Rhodobacter sphaeroides 2.4.1]
 gi|221161097|gb|ACM02077.1| Exodeoxyribonuclease III Xth [Rhodobacter sphaeroides KD131]
          Length = 262

 Score =  169 bits (427), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 73/265 (27%), Positives = 109/265 (41%), Gaps = 8/265 (3%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
             T+ATWN+NS+R R   ++  + E  PDI+CLQE K+  +  P E  ++L YH      
Sbjct: 2   TFTLATWNINSVRLREALVSRLLTEEMPDILCLQECKSPVEKMPLEAFRALGYHWCVARG 61

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           +       +    P+       GD                   + I N Y+P G  I   
Sbjct: 62  QKSYNGVAILSKLPLVD----AGDHDFADLGHARHVSAALENGVTIHNCYVPAGGDIPDR 117

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL-EV 179
           + + K      +L         + P      GD NI P+  D +N          T  EV
Sbjct: 118 EQNVKFGQKLDYLTRMRDWCRADTPKKAILVGDLNIAPREDDVWNHKSLLKIVSHTPIEV 177

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHS 238
                 ++   + D  R       LYS+W Y +  W   +KG R+DHI  +P+  +  H 
Sbjct: 178 DHLNALMEAGAWIDVTRKDLPEGRLYSWWSYRSPDWEAADKGRRLDHIWATPDIVNAAHG 237

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263
           +RI    RGW +PSDH PV  + D+
Sbjct: 238 SRILKAARGWLQPSDHAPVFATFDL 262


>gi|254498808|ref|ZP_05111519.1| exodeoxyribonuclease III [Legionella drancourtii LLAP12]
 gi|254351972|gb|EET10796.1| exodeoxyribonuclease III [Legionella drancourtii LLAP12]
          Length = 260

 Score =  169 bits (427), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 67/264 (25%), Positives = 118/264 (44%), Gaps = 14/264 (5%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNF-PFETLQSLNYHI--ET 59
           + V ++N N IRA        W+   + D +C+QETK + +   P E     +Y     +
Sbjct: 1   MKVISFNANGIRAAARNGFYEWLVAQDADFVCIQETKAQPEQLLPEEMYYPRDYFCDYYS 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GVAI ++++P  IV  +  D  D + R+I+  +   +                
Sbjct: 61  AQKKGYSGVAIYARHKPTRIVKGIGYDYCDNEGRYIQFDYPKLSVI-----SLYLPSGTS 115

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-E 178
              + + K  ++++F +   Q       LI  GDYNI  +  D  N    + ++ F   E
Sbjct: 116 GDGRQEVKYDFLEQFAKHLIQLKNEGRELIICGDYNIAHKQIDLKNWRSNQKNSGFLPDE 175

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
                +   +MGF DA R  +     Y++W Y + +W KN G RID+ +++P  +  +  
Sbjct: 176 RAWMDKLFGSMGFVDAFRVHNQEEEQYTWWSYRSRAWEKNVGWRIDYQVITPGLSEHVID 235

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
           +RI  + R     SDH P ++   
Sbjct: 236 SRIFREAR----LSDHAPFMIEYK 255


>gi|209551337|ref|YP_002283254.1| exodeoxyribonuclease III Xth [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209537093|gb|ACI57028.1| exodeoxyribonuclease III Xth [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 267

 Score =  169 bits (427), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 73/264 (27%), Positives = 110/264 (41%), Gaps = 9/264 (3%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64
           + TWN+NS+R R+  +   + ++ PDI+CLQETK  ++ FP   L+++ Y HI   GQK 
Sbjct: 5   ITTWNINSVRLRMPIVEQLVLKHRPDILCLQETKVTNELFPAAPLRAMGYDHIIIHGQKG 64

Query: 65  YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124
           Y+GVAI S+    E          D +            + +R+ N Y+P G        
Sbjct: 65  YHGVAIASRIPLTEDHRQDYCGVGDARHISAIFEHG--NRRIRLHNFYVPAGGDEPDRTI 122

Query: 125 DDKISWIKRFLRFASQRLELEEPLI---FAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
           + K      F+          E        GD NI P  HD ++          T     
Sbjct: 123 NPKFGHKLDFIEEMKLLKANGEANTSAILVGDLNIAPLEHDVWSHKQLLKIVSHTPVETD 182

Query: 182 --SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHS 238
                  +        +   ++  LY++W Y A  W   ++G R+DHI  S +    L  
Sbjct: 183 GLLEVMKRGNWLDLMRQHVPESEKLYTWWSYRAKDWEAADRGRRLDHIWSSSDLGPHLKR 242

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
             I  + RGW +PSDH PV    D
Sbjct: 243 IEILKEARGWDRPSDHVPVTAHFD 266


>gi|114800092|ref|YP_762220.1| putative exodeoxyribonuclease III [Hyphomonas neptunium ATCC 15444]
 gi|114740266|gb|ABI78391.1| putative exodeoxyribonuclease III [Hyphomonas neptunium ATCC 15444]
          Length = 269

 Score =  169 bits (427), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 64/266 (24%), Positives = 114/266 (42%), Gaps = 9/266 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN--YHIETCG 61
           + + TWN+NS+R R  N+ A++    PD++CLQETK +D  FP +  + +   Y +    
Sbjct: 5   IKITTWNINSVRLRAPNVEAFVAAEKPDVVCLQETKCQDAEFPLKAFKDMGLPYLVIRGQ 64

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +  + GVAI S+    ++       +   +         +    + +        +P  +
Sbjct: 65  RGGHAGVAIASRLPLEQVDVPDLCRENHARVIAARLPSGLEVHNIYLPAG-GDTPDPDAN 123

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            K+  K+ ++ R       +L+     +  GD N+ P  +D ++          T +  +
Sbjct: 124 DKFAHKLDFLDRLGPGYK-KLKKGVKRVLVGDLNVAPHENDVWSHKQLLGIVSHTPQETE 182

Query: 182 S--FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATS--LL 236
                +        A  A  +   LY++W Y A  W + N+G R+DHI  +  A     +
Sbjct: 183 RLEDSRKSAGFEDIARLAVPEEQKLYTWWSYRAADWAASNRGRRLDHIWANKAAMEDVKV 242

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLD 262
            S RI    R   KPSDH PV ++L 
Sbjct: 243 SSYRIHPAWRSGWKPSDHAPVSLTLK 268


>gi|169630763|ref|YP_001704412.1| putative exodeoxyribonuclease [Mycobacterium abscessus ATCC 19977]
 gi|169242730|emb|CAM63758.1| Putative exodeoxyribonuclease [Mycobacterium abscessus]
          Length = 273

 Score =  169 bits (427), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 60/273 (21%), Positives = 104/273 (38%), Gaps = 13/273 (4%)

Query: 1   MS--VVTVATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51
           MS   +TV T NVN IRA +         L  W+++ + DI+CLQE + E+         
Sbjct: 1   MSAQKITVTTINVNGIRAAVKERSAENRGLLPWLEQTSSDIVCLQEVRAEEDQLREALAP 60

Query: 52  SL--NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
           +L   + + +          +    +     T +  D    +              L + 
Sbjct: 61  ALAAGWQVVSAASSVKGRSGVGILSRVPAASTRVALDADGGEFDESGRYLEAEIGDLTVA 120

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
           ++YLP G    + + ++K  ++       +         +  GD+NI     D       
Sbjct: 121 SIYLPTGE-AGTARQEEKERFMAAVGARMAVLAASGRDTVICGDWNIGHTERDIKAWKAN 179

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIML 228
           +  A F  E R     L   G+ D+ R  H      YS+W +   ++  + G RID+ + 
Sbjct: 180 QKKAGFLPEERAWVGSLLEAGWVDSFRLLHPDVDGPYSWWSWRGKAFDNDAGWRIDYHLA 239

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           + +     HSAR++       + SDH PV V  
Sbjct: 240 TADLGRRAHSARVERADAYALRWSDHAPVTVEY 272


>gi|190893818|ref|YP_001980360.1| exodeoxyribonuclease III protein [Rhizobium etli CIAT 652]
 gi|190699097|gb|ACE93182.1| exodeoxyribonuclease III protein [Rhizobium etli CIAT 652]
          Length = 267

 Score =  168 bits (426), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 76/265 (28%), Positives = 113/265 (42%), Gaps = 9/265 (3%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64
           V TWN+NS+R R+  +   + ++ PDI+CLQETK  ++ FP   L+++ Y HI   GQK 
Sbjct: 5   VTTWNINSVRLRMPIVEQLVLKHRPDILCLQETKVPNELFPAAPLRAMGYDHIIIHGQKG 64

Query: 65  YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124
           Y+GVAI S+    E          D +            + +R+ N Y+P G        
Sbjct: 65  YHGVAIASRIPLTEDHRQDYCGVGDARHISAIFERG--NRRIRLHNFYVPAGGDEPDRTI 122

Query: 125 DDKISWIKRFLRFASQRLELEEPLI---FAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
           + K      F+          E        GD NI P  HD ++          T     
Sbjct: 123 NPKFGHKLDFIEEMKLLKANGEANTSAILVGDLNIAPLEHDVWSHKQLLKIVSHTPVETD 182

Query: 182 SFQKLQNMGFTDAIRATH--DTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHS 238
              ++   G    +   H   +  LY++W Y A  W   ++G R+DHI  S +    L  
Sbjct: 183 GLLEVMRRGAWLDLMRQHVPASEKLYTWWSYRAKDWEAADRGRRLDHIWSSSDLGPHLKR 242

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263
             I  + RGW +PSDH PV    D+
Sbjct: 243 IEILKEARGWDRPSDHVPVTAHFDL 267


>gi|319441976|ref|ZP_07991132.1| exodeoxyribonuclease III [Corynebacterium variabile DSM 44702]
          Length = 293

 Score =  168 bits (426), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 64/289 (22%), Positives = 112/289 (38%), Gaps = 30/289 (10%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++ +AT NVN IRA        W+   + D+I +QE + +    P +   + +  +ET  
Sbjct: 1   MLRIATANVNGIRAAQRRGFGDWLDARDCDVIAVQEVRAQPDKIPEDAFGNYHVALETGN 60

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDL--------DVQARFIEATFTINTQTLRIGNLYL 113
               NGVA+L+K  P+ + T   G D             +       +    + +  LYL
Sbjct: 61  IPGRNGVAVLTKTPPVAVRTWSDGSDRVPLPRKLRPFIPQGRYIEVDLADAPVTVACLYL 120

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLEL------------------EEPLIFAGDYN 155
           P G      +  +++           +++                        +  GD N
Sbjct: 121 PKGGLPAEMQRPERMREAPDGGARYERKMGFLAGFGRYLTATRRAALAEGREFLLMGDMN 180

Query: 156 IIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA--THDTHHLYSFWDYYAD 213
           I    HD  +    ++   F  E R+ F +  +      +      D    YS+W +   
Sbjct: 181 IAHTRHDLTHWRRNQSHDGFLPEEREWFDRQLSPRTLVDVVRSLHPDEDGPYSWWSWAGQ 240

Query: 214 SWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
           S++K+ G RID+ + +P       SA +D   RG  + SDH+PV+V  D
Sbjct: 241 SFAKDAGWRIDYHLATPRLARTATSAGVDRDFRGM-RLSDHSPVVVDYD 288


>gi|269119015|ref|YP_003307192.1| exodeoxyribonuclease III Xth [Sebaldella termitidis ATCC 33386]
 gi|268612893|gb|ACZ07261.1| exodeoxyribonuclease III Xth [Sebaldella termitidis ATCC 33386]
          Length = 255

 Score =  168 bits (426), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 66/264 (25%), Positives = 111/264 (42%), Gaps = 15/264 (5%)

Query: 4   VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59
           + + +WNVN IRA  +        +E  P+I+C+QETK + +    E L    Y    E+
Sbjct: 1   MRIYSWNVNGIRALYNKGEFFKLFEEE-PEIVCIQETKAQAEQLSEELLNINGYSSFFES 59

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GVA+ SK +P+ +                            I        +  
Sbjct: 60  ADKKGYSGVAVYSKKKPLMVKKFDIERFDSEGRYIELEYEDF------ILINCYFPNSQE 113

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              + D KI +    L +  +R +  + +I  GDYNI  +P D   P   E +  +  E 
Sbjct: 114 KGKRLDYKIDFCDEILNYLEERKKSGKAVIITGDYNIAHKPIDLARPKDNEENPGYLPEE 173

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R+   K    G+ D+ R  +     Y++W Y   +  KN G RID+  ++ E+  +L  +
Sbjct: 174 REWMTKFIEAGYVDSFRKFYPEEVKYTWWSYRTRAREKNIGWRIDYFCINKESEGILIDS 233

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
            I     G    SDH P+ + + +
Sbjct: 234 GIRNDVFG----SDHCPIYIDISV 253


>gi|288917707|ref|ZP_06412070.1| exodeoxyribonuclease III Xth [Frankia sp. EUN1f]
 gi|288350922|gb|EFC85136.1| exodeoxyribonuclease III Xth [Frankia sp. EUN1f]
          Length = 263

 Score =  168 bits (426), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 57/264 (21%), Positives = 108/264 (40%), Gaps = 4/264 (1%)

Query: 3   VVTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++ VAT NVN IRA R   +  W+++  PDI+C+QE + +D           +   E   
Sbjct: 1   MLRVATVNVNGIRAARRRGMGTWLEDRRPDILCVQEVRADDAILADAVGPGWHIVHEASA 60

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
            K   GVA+LS+  P+++   L       +    + +   +   L + ++Y+  G    +
Sbjct: 61  AKGRAGVAVLSRAAPVDVRLGLGDFTGSGRWVEADFSLDGDPGLLTVVSVYVHTGE-ADT 119

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
              ++K  ++       ++       ++  GD NI  +  D  N       A F  + R 
Sbjct: 120 PLQEEKYRFLAAIRERMAKLAADGRHVLVCGDLNICHREIDLKNWKGNLKKAGFLPQERA 179

Query: 182 S--FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
                   +           +    Y++W +   ++  + G RID+++ + +    L SA
Sbjct: 180 WLDQLFTDDGFVDLVRNFAGEQPGPYTWWSWRGRAYDTDAGWRIDYLISTGQLAERLLSA 239

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
            +D  P    + SDH PV    D+
Sbjct: 240 AVDRAPAYDQRWSDHAPVYTDFDV 263


>gi|126463266|ref|YP_001044380.1| exodeoxyribonuclease III Xth [Rhodobacter sphaeroides ATCC 17029]
 gi|126104930|gb|ABN77608.1| exodeoxyribonuclease III Xth [Rhodobacter sphaeroides ATCC 17029]
          Length = 262

 Score =  168 bits (426), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 73/265 (27%), Positives = 110/265 (41%), Gaps = 8/265 (3%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
             T+ATWN+NS+R R   ++  + E  PDI+CLQE K+  +  P E  ++L YH      
Sbjct: 2   TFTLATWNINSVRLREALVSRLLTEEMPDILCLQECKSPVEKMPLEAFRALGYHWCVARG 61

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           +       +    P+       GD                   + I N Y+P G  I   
Sbjct: 62  QKSYNGVAILSKLPLVD----AGDHDFADLGHARHVSAALENGVTIHNCYVPAGGDIPDR 117

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL-EV 179
           + + K      +L         + P      GD NI P+  D +N          T  EV
Sbjct: 118 EQNVKFGQKLDYLTRMRDWCRADTPKKAILVGDLNIAPREDDVWNHKSLLKIVSHTPIEV 177

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHS 238
                 +++  + D  R       LYS+W Y +  W   +KG R+DHI  +P+  +  H 
Sbjct: 178 DHLNALMESGAWIDVTRKDLPEGRLYSWWSYRSPDWEAADKGRRLDHIWATPDIVNAAHG 237

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263
           +RI    RGW +PSDH PV  + D+
Sbjct: 238 SRILKAARGWLQPSDHAPVFATFDL 262


>gi|327190170|gb|EGE57275.1| exodeoxyribonuclease III protein [Rhizobium etli CNPAF512]
          Length = 267

 Score =  168 bits (426), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 77/265 (29%), Positives = 114/265 (43%), Gaps = 9/265 (3%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64
           V TWN+NS+R R+  +   + ++ PDI+CLQETK  ++ FP   L+++ Y HI   GQK 
Sbjct: 5   VTTWNINSVRLRMPIVEQLVLKHRPDILCLQETKVPNELFPAAPLRAMGYDHIIIHGQKG 64

Query: 65  YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124
           Y+GVAI S+   IE          D +            + +R+ N Y+P G        
Sbjct: 65  YHGVAIASRIPLIEDHRQDYCGVGDARHISAIFERG--NRRIRLHNFYVPAGGDEPDRTI 122

Query: 125 DDKISWIKRFLRFASQRLELEEPLI---FAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
           + K      F+          E        GD NI P  HD ++          T     
Sbjct: 123 NPKFGHKLDFIEEMKLLKANGEANTSAILVGDLNIAPLEHDVWSHKQLLKIVSHTPVETD 182

Query: 182 SFQKLQNMGFTDAIRATH--DTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHS 238
              ++   G    +   H   +  LY++W Y A  W   ++G R+DHI  S +    L  
Sbjct: 183 GLLEVMRRGAWLDLMRQHVPASEKLYTWWSYRAKDWEAADRGRRLDHIWSSSDLGPHLKR 242

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263
             I  + RGW +PSDH PV    D+
Sbjct: 243 IEILKEARGWDRPSDHVPVTAHFDL 267


>gi|156362086|ref|XP_001625612.1| predicted protein [Nematostella vectensis]
 gi|156212454|gb|EDO33512.1| predicted protein [Nematostella vectensis]
          Length = 257

 Score =  168 bits (426), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 71/265 (26%), Positives = 121/265 (45%), Gaps = 13/265 (4%)

Query: 2   SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFET-LQSLNYHIET 59
           S   + +WNVN +RA + N   +++ + +PD+ C+QETK    + P E  L   + +  +
Sbjct: 3   SNFKITSWNVNGLRAWLKNNSKSFVSKEDPDVFCIQETKCALADIPKEAKLAGYHCYWNS 62

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             QK Y+GV + SK +PI++   +   + D + R I A +        + +     G  +
Sbjct: 63  AEQKGYSGVGLCSKKEPIKVSYGMGNKEHDKEGRVITAEYEDFH---LVTSYVPNSGRGL 119

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
               Y  +     +      ++L+  +P+I  GD N+  +  D  NP      A FT E 
Sbjct: 120 PRLGYRQQW---NKDFLSYLKKLDEIKPVILCGDLNVAHKDIDLANPKTNTRTAGFTKEE 176

Query: 180 RQSFQKLQNMGFTDAIRATHDTHH-LYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R  F  L   GF D  R  +      Y+FW Y   + +KN G R+D+ ++S      +  
Sbjct: 177 RADFTTLLGEGFKDTFRELYPDKKSAYTFWSYMGGARAKNVGWRLDYFVVSDRLVPKVCD 236

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263
           + I ++  G    SDH P+ + L I
Sbjct: 237 SIIRSRVMG----SDHCPLSLLLSI 257


>gi|312797575|ref|YP_004030497.1| Exodeoxyribonuclease III [Burkholderia rhizoxinica HKI 454]
 gi|312169350|emb|CBW76353.1| Exodeoxyribonuclease III (EC 3.1.11.2) [Burkholderia rhizoxinica
           HKI 454]
          Length = 262

 Score =  168 bits (426), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 62/264 (23%), Positives = 107/264 (40%), Gaps = 14/264 (5%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59
           ++ V T N+N IR+        W  E N DI+C+QE K    +   E L    +  + + 
Sbjct: 1   MLRVITANLNGIRSATKKGFFDWFGEQNADIVCVQEIKCSQDDMTPEFLAPHGFTGYFQH 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G  I ++++P E +        D + R++E  +  +   + +       G   
Sbjct: 61  AQKKGYSGAGIYTRHEPDEFIAGFGSKAFDHEGRYVELRYG-DLSLVSVYVPSGSSGEER 119

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
            + KY                 L  E  +IF GD NI+ +  D  N    + ++    E 
Sbjct: 120 QAVKYRF-----MDDFYAHLDALRREREVIFCGDINIVHKEIDIKNWKSNQKNSGCLPEE 174

Query: 180 RQSFQKLQN-MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R    K+ + +G+ D  RA       Y++W     +++KN G RID+ + +    S    
Sbjct: 175 RAWLSKVFDKLGYVDVFRALDPRPEQYTWWSNRGQAYAKNVGWRIDYQIATAGIASTARR 234

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
             I        K SDH P+ +  D
Sbjct: 235 TSIFRDI----KFSDHAPLTIDYD 254


>gi|149193831|ref|ZP_01870929.1| exodeoxyribonuclease III (xthA) [Caminibacter mediatlanticus TB-2]
 gi|149135784|gb|EDM24262.1| exodeoxyribonuclease III (xthA) [Caminibacter mediatlanticus TB-2]
          Length = 252

 Score =  168 bits (426), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 72/262 (27%), Positives = 127/262 (48%), Gaps = 12/262 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + T+NVNSIR+R+  +   +K+ N D++C+QE K E++ FP   +   ++     GQK
Sbjct: 1   MKICTFNVNSIRSRLEIIQNLVKDYNIDVLCMQEIKVENEKFP---IIDGDFECIIHGQK 57

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
             +GVA  SKY          G+  + +  +           + I N+Y P G+      
Sbjct: 58  RLHGVATCSKYPIEGYQKGFDGELNEPRFIY------TLINVIHIINIYAPLGDSYGDR- 110

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           ++ K+ +  +   +  +    ++ ++  GD+NI     D ++  IWE +     E R   
Sbjct: 111 FEYKMYFYDKLFEWLKRFDLNKDKVLICGDFNISHTSLDVWDEEIWEGEVTHLPEERAIL 170

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            K  ++GF D IR  +    +++F+DY   +  KN+G+R+D+I++S    S      I T
Sbjct: 171 SKFLDIGFIDIIREVYKDEKVFTFYDYRGAAVYKNEGLRLDYILVSKPLFSKFKKVDILT 230

Query: 244 KPRGWTK--PSDHTPVIVSLDI 263
             R   K  PSDH P+I   D+
Sbjct: 231 SIRRKRKPTPSDHVPIIAEFDV 252


>gi|85710025|ref|ZP_01041090.1| exonuclease III [Erythrobacter sp. NAP1]
 gi|85688735|gb|EAQ28739.1| exonuclease III [Erythrobacter sp. NAP1]
          Length = 262

 Score =  168 bits (426), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 82/266 (30%), Positives = 128/266 (48%), Gaps = 9/266 (3%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCG 61
           +++VATWN+NS R R+  +  ++K   PD++CLQE K E   FP E L  + Y H    G
Sbjct: 1   MLSVATWNINSARLRLPIIEKYLKAEAPDVLCLQEIKCESHLFPAEALAEMGYEHQAISG 60

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           QK Y+GVA +S+    EI  H    D             +  + + I N+Y+P G  I  
Sbjct: 61  QKGYHGVATVSRVPIREISRH----DWQDNGEARHVGVEVVGKDMLIENVYVPAGGDIPD 116

Query: 122 TKYDDKISWIKRFLRFASQRLEL-EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
            + + K      FL   ++  +  ++P +  GD+NI P   D ++          T    
Sbjct: 117 REKNVKFGQKLDFLGRMTKWADKVDKPTLIVGDFNIAPLESDVWSHKQLLKVVSHTPIEV 176

Query: 181 QSFQKLQNMGFTDAIRATH--DTHHLYSFWDYYADSWSKN-KGIRIDHIMLSPEATSLLH 237
           ++ Q+ ++      I   H  D    YS+W Y +  W KN +G R+DH+  SPE  +   
Sbjct: 177 ETLQRFKDAHGWVDIGREHIRDPERYYSWWSYRSPDWRKNDRGRRLDHMWASPELAAQAK 236

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263
           + R+  + R W KPSDH P++   DI
Sbjct: 237 AHRLLEEARSWEKPSDHIPLVTEFDI 262


>gi|171915906|ref|ZP_02931376.1| exodeoxyribonuclease III [Verrucomicrobium spinosum DSM 4136]
          Length = 250

 Score =  168 bits (426), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 68/257 (26%), Positives = 103/257 (40%), Gaps = 11/257 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN IRA +   L  ++   + D+ICLQE K  ++    E  +          +
Sbjct: 1   MKLVSWNVNGIRACMDKGLREYLTACDADVICLQEVKAMEEQAGLEWFKDYQVVWNAAQK 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AIL++         +  D+ D + R I   F                       
Sbjct: 61  KGYSGTAILTRQPIKSHAIGMGIDEHDKEGRVITVEFPD-----YYVVNVYTPNAQAELA 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +   ++ W   F  +    LE  +P++  GD N+     D   P        F+ + R S
Sbjct: 116 RLPYRLLWDDAFRLYLKN-LEQTKPVLACGDLNVAHNEIDIARPKENRFSPGFSDQERAS 174

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F KL   GF D  R      H YS+W Y A++   N G RID+ + S      L S+ I 
Sbjct: 175 FGKLLESGFVDTFRHFDSRPHQYSWWSYRANARGNNVGWRIDYWLASQGLKDGLKSSIIR 234

Query: 243 TKPRGWTKPSDHTPVIV 259
               G    SDH PV +
Sbjct: 235 PDIHG----SDHCPVEL 247


>gi|258405188|ref|YP_003197930.1| exodeoxyribonuclease III [Desulfohalobium retbaense DSM 5692]
 gi|257797415|gb|ACV68352.1| exodeoxyribonuclease III [Desulfohalobium retbaense DSM 5692]
          Length = 255

 Score =  168 bits (426), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 64/260 (24%), Positives = 101/260 (38%), Gaps = 8/260 (3%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN  RA +      W  + + D+ICLQETK      P E  Q +N H      
Sbjct: 1   MRLYSWNVNGFRAVVQKGFWDWFAQCDGDVICLQETKATLDQVP-EKHQHVNTHQIIWNG 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
            +                 H      D+Q +    T  +  +   + N+Y P+G      
Sbjct: 60  ATVKKGYSGVACFARTPPVHWSRGLPDMQYQGEGRTLLLEYRDFYLLNIYFPNGQMSQER 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
              D            ++ L   +P+I  GD N      D  NP    + + F  E R  
Sbjct: 120 L--DYKMGFYDAFFDYAEHLRQTKPVIVCGDLNTAHTEIDLKNPKANADRSGFLPEERAW 177

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
                + G+ D  R        YS+W Y  ++ ++N G RID+  +S E T  + +A I+
Sbjct: 178 IDTFISHGYHDTFRMFTSEGGHYSWWTYRFNARARNAGWRIDYFFVSDELTGRVRNAWIE 237

Query: 243 TKPRGWTKPSDHTPVIVSLD 262
               G    SDH P+ + +D
Sbjct: 238 DTVYG----SDHCPIGLEID 253


>gi|289424786|ref|ZP_06426568.1| exodeoxyribonuclease III [Propionibacterium acnes SK187]
 gi|289427574|ref|ZP_06429286.1| exodeoxyribonuclease III [Propionibacterium acnes J165]
 gi|295131421|ref|YP_003582084.1| exodeoxyribonuclease III [Propionibacterium acnes SK137]
 gi|289154749|gb|EFD03432.1| exodeoxyribonuclease III [Propionibacterium acnes SK187]
 gi|289159065|gb|EFD07257.1| exodeoxyribonuclease III [Propionibacterium acnes J165]
 gi|291377273|gb|ADE01128.1| exodeoxyribonuclease III [Propionibacterium acnes SK137]
 gi|313763084|gb|EFS34448.1| exodeoxyribonuclease III [Propionibacterium acnes HL013PA1]
 gi|313773022|gb|EFS38988.1| exodeoxyribonuclease III [Propionibacterium acnes HL074PA1]
 gi|313802417|gb|EFS43642.1| exodeoxyribonuclease III [Propionibacterium acnes HL110PA2]
 gi|313807850|gb|EFS46334.1| exodeoxyribonuclease III [Propionibacterium acnes HL087PA2]
 gi|313812037|gb|EFS49751.1| exodeoxyribonuclease III [Propionibacterium acnes HL083PA1]
 gi|313812136|gb|EFS49850.1| exodeoxyribonuclease III [Propionibacterium acnes HL025PA1]
 gi|313819198|gb|EFS56912.1| exodeoxyribonuclease III [Propionibacterium acnes HL046PA2]
 gi|313819763|gb|EFS57477.1| exodeoxyribonuclease III [Propionibacterium acnes HL036PA1]
 gi|313823880|gb|EFS61594.1| exodeoxyribonuclease III [Propionibacterium acnes HL036PA2]
 gi|313827241|gb|EFS64955.1| exodeoxyribonuclease III [Propionibacterium acnes HL063PA1]
 gi|313828429|gb|EFS66143.1| exodeoxyribonuclease III [Propionibacterium acnes HL063PA2]
 gi|313831114|gb|EFS68828.1| exodeoxyribonuclease III [Propionibacterium acnes HL007PA1]
 gi|313833483|gb|EFS71197.1| exodeoxyribonuclease III [Propionibacterium acnes HL056PA1]
 gi|313838117|gb|EFS75831.1| exodeoxyribonuclease III [Propionibacterium acnes HL086PA1]
 gi|314914557|gb|EFS78388.1| exodeoxyribonuclease III [Propionibacterium acnes HL005PA4]
 gi|314919199|gb|EFS83030.1| exodeoxyribonuclease III [Propionibacterium acnes HL050PA1]
 gi|314920633|gb|EFS84464.1| exodeoxyribonuclease III [Propionibacterium acnes HL050PA3]
 gi|314925728|gb|EFS89559.1| exodeoxyribonuclease III [Propionibacterium acnes HL036PA3]
 gi|314931457|gb|EFS95288.1| exodeoxyribonuclease III [Propionibacterium acnes HL067PA1]
 gi|314957017|gb|EFT01123.1| exodeoxyribonuclease III [Propionibacterium acnes HL027PA1]
 gi|314957831|gb|EFT01934.1| exodeoxyribonuclease III [Propionibacterium acnes HL002PA1]
 gi|314960672|gb|EFT04773.1| exodeoxyribonuclease III [Propionibacterium acnes HL002PA2]
 gi|314963372|gb|EFT07472.1| exodeoxyribonuclease III [Propionibacterium acnes HL082PA1]
 gi|314969733|gb|EFT13831.1| exodeoxyribonuclease III [Propionibacterium acnes HL037PA1]
 gi|314974296|gb|EFT18392.1| exodeoxyribonuclease III [Propionibacterium acnes HL053PA1]
 gi|314976933|gb|EFT21028.1| exodeoxyribonuclease III [Propionibacterium acnes HL045PA1]
 gi|314979892|gb|EFT23986.1| exodeoxyribonuclease III [Propionibacterium acnes HL072PA2]
 gi|314985810|gb|EFT29902.1| exodeoxyribonuclease III [Propionibacterium acnes HL005PA1]
 gi|314988407|gb|EFT32498.1| exodeoxyribonuclease III [Propionibacterium acnes HL005PA2]
 gi|314988831|gb|EFT32922.1| exodeoxyribonuclease III [Propionibacterium acnes HL005PA3]
 gi|315079798|gb|EFT51774.1| exodeoxyribonuclease III [Propionibacterium acnes HL078PA1]
 gi|315084894|gb|EFT56870.1| exodeoxyribonuclease III [Propionibacterium acnes HL027PA2]
 gi|315087238|gb|EFT59214.1| exodeoxyribonuclease III [Propionibacterium acnes HL002PA3]
 gi|315088971|gb|EFT60947.1| exodeoxyribonuclease III [Propionibacterium acnes HL072PA1]
 gi|315096818|gb|EFT68794.1| exodeoxyribonuclease III [Propionibacterium acnes HL038PA1]
 gi|315100579|gb|EFT72555.1| exodeoxyribonuclease III [Propionibacterium acnes HL046PA1]
 gi|315109351|gb|EFT81327.1| exodeoxyribonuclease III [Propionibacterium acnes HL030PA2]
 gi|327325640|gb|EGE67438.1| exodeoxyribonuclease III [Propionibacterium acnes HL096PA2]
 gi|327328234|gb|EGE70001.1| exodeoxyribonuclease III [Propionibacterium acnes HL096PA3]
 gi|327445310|gb|EGE91964.1| exodeoxyribonuclease III [Propionibacterium acnes HL043PA1]
 gi|327446951|gb|EGE93605.1| exodeoxyribonuclease III [Propionibacterium acnes HL043PA2]
 gi|327449053|gb|EGE95707.1| exodeoxyribonuclease III [Propionibacterium acnes HL013PA2]
 gi|327452601|gb|EGE99255.1| exodeoxyribonuclease III [Propionibacterium acnes HL087PA3]
 gi|327457644|gb|EGF04299.1| exodeoxyribonuclease III [Propionibacterium acnes HL083PA2]
 gi|328751915|gb|EGF65531.1| exodeoxyribonuclease III [Propionibacterium acnes HL087PA1]
 gi|328756939|gb|EGF70555.1| exodeoxyribonuclease III [Propionibacterium acnes HL020PA1]
 gi|328759048|gb|EGF72664.1| exodeoxyribonuclease III [Propionibacterium acnes HL025PA2]
 gi|328762251|gb|EGF75743.1| exodeoxyribonuclease III [Propionibacterium acnes HL099PA1]
          Length = 297

 Score =  168 bits (426), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 61/297 (20%), Positives = 105/297 (35%), Gaps = 37/297 (12%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + +A++N+N IRA +    +  ++  + D+I LQE +    + P       +        
Sbjct: 1   MRIASFNINGIRAALKRGFSERMEARDCDVIGLQEVRCRPADLPEGAFGDRHVSWAPGSL 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDL------------------------DVQARFIEAT 98
              NGVA+L++  P E+ +      +                                  
Sbjct: 61  AGRNGVALLTRTAPAEVRSWGTHLVMAPGQAPTPAQALTGNTDGLPTELLPFADEGRYIE 120

Query: 99  FTINTQTLRIGNLYLPHGNPITS----------TKYDDKISWIKRFLRFASQRLELEEPL 148
             +    L +  LYLP G                K      +    +R   +        
Sbjct: 121 VDLADTPLTVACLYLPKGATPDPANEKTIAKQDRKMAFLTGFRDHLVRRRQECTTQGRHF 180

Query: 149 IFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL--QNMGFTDAIRATHDTHHLYS 206
           +  GD+NI  +  D  N    + +  F  E RQ F  +   +           DT+  YS
Sbjct: 181 LVMGDFNIAHENADLKNWKANQRNEGFLPEERQWFDTILSPDTLIDVVRAQHPDTNGPYS 240

Query: 207 FWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +W +   ++  + G RID+ + SPE  S   +A ID  P    + SDH  V+V  D+
Sbjct: 241 WWSWRGKAFVNDAGWRIDYHLASPELASKAITAEIDRDPSYSERTSDHAAVVVDYDL 297


>gi|103488148|ref|YP_617709.1| exodeoxyribonuclease III (xth) [Sphingopyxis alaskensis RB2256]
 gi|98978225|gb|ABF54376.1| exodeoxyribonuclease III (xth) [Sphingopyxis alaskensis RB2256]
          Length = 264

 Score =  168 bits (426), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 75/267 (28%), Positives = 122/267 (45%), Gaps = 11/267 (4%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIET 59
           M+  ++A+WN+NS+RARI  +  +++E  PDI+CLQETK E   FP    ++L Y HI T
Sbjct: 1   MTRTSIASWNINSVRARIGIVEKFLREEAPDILCLQETKVECGLFPKAMFEALGYGHIVT 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            GQ+ ++GVAI+S+    E+  +                       +R+ N+Y+P G  I
Sbjct: 61  HGQRMHHGVAIVSRLPLAEVRKYD-----WQANGEARHIGVTLPSGVRLDNVYIPAGGDI 115

Query: 120 TSTKYDDKISWIKRFLRFASQRLE--LEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
              + + K      FL   +         P +  GD+N+ P   D +N     +    T 
Sbjct: 116 PDREINPKFGQKLDFLARMTDWSGGLNGTPTVLTGDFNVAPLASDVWNHKALLDVVSHTP 175

Query: 178 EVRQ--SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATS 234
              +  +  +  +               LY++W Y A  W   N+G R+DH+ ++P+   
Sbjct: 176 IEVETLARLQAASDWVDLGRHFIAAPAPLYTWWSYRAKDWEASNRGRRLDHMWVTPDLKD 235

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261
              + RI    R W +PSDH P+I   
Sbjct: 236 KAVAHRIVQPARSWERPSDHVPLITEF 262


>gi|54293631|ref|YP_126046.1| hypothetical protein lpl0684 [Legionella pneumophila str. Lens]
 gi|54296671|ref|YP_123040.1| hypothetical protein lpp0702 [Legionella pneumophila str. Paris]
 gi|148360699|ref|YP_001251906.1| exodeoxyribonuclease III [Legionella pneumophila str. Corby]
 gi|296106236|ref|YP_003617936.1| exodeoxyribonuclease III [Legionella pneumophila 2300/99 Alcoy]
 gi|53750456|emb|CAH11850.1| hypothetical protein lpp0702 [Legionella pneumophila str. Paris]
 gi|53753463|emb|CAH14918.1| hypothetical protein lpl0684 [Legionella pneumophila str. Lens]
 gi|148282472|gb|ABQ56560.1| exodeoxyribonuclease III [Legionella pneumophila str. Corby]
 gi|158512141|gb|ABW69102.1| exodeoxyribonuclease III [Legionella pneumophila]
 gi|295648137|gb|ADG23984.1| exodeoxyribonuclease III [Legionella pneumophila 2300/99 Alcoy]
 gi|307609445|emb|CBW98939.1| hypothetical protein LPW_07241 [Legionella pneumophila 130b]
          Length = 260

 Score =  168 bits (426), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 74/264 (28%), Positives = 124/264 (46%), Gaps = 14/264 (5%)

Query: 4   VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKN-FPFETLQSLNYHIETCG 61
           + V ++N N IR+   +    W+   + D +C+QETK++ +   P E     +Y  +   
Sbjct: 1   MKVISFNANGIRSSARNGFYDWLVGQDVDFVCIQETKSQVEQLIPEELYFPRDYFCDYFD 60

Query: 62  --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GVAI SKY+P+ IV  L  D  D + R+I+  +   +                
Sbjct: 61  AEKKGYSGVAIYSKYKPVRIVKGLGFDYCDKEGRYIQFDYPKLSVI-----SLYLPSGTS 115

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              + + K +++++F R           LI  GDYNI  +  D  N    + ++ F  E 
Sbjct: 116 GEDRQEVKYAFLEQFARHLMNLKNEGRELIICGDYNIAHKKIDLKNWRGNQKNSGFLPEE 175

Query: 180 RQSFQKLQ-NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R    +L  +MGF DA R  +     Y++W Y A +W KN G RID+ +++P  T  +  
Sbjct: 176 RAWMDELFGSMGFVDAFRVHNQEEEQYTWWSYRARAWEKNVGWRIDYQVITPGLTEYVAD 235

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
           +RI  + R     SDH P+++   
Sbjct: 236 SRIFREAR----FSDHAPLMIEYK 255


>gi|319778623|ref|YP_004129536.1| Exodeoxyribonuclease III [Taylorella equigenitalis MCE9]
 gi|317108647|gb|ADU91393.1| Exodeoxyribonuclease III [Taylorella equigenitalis MCE9]
          Length = 266

 Score =  168 bits (425), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 54/265 (20%), Positives = 99/265 (37%), Gaps = 9/265 (3%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++ + + NVN +R+     +  W+    PDI+CLQE K   ++        L Y  E   
Sbjct: 1   MLRITSLNVNGLRSAFNKGIVQWLSICKPDIVCLQEIKISAEDLTDSLRSPLIYKSEFNH 60

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
            +      +    +      +      + +        ++  + L + + YLP G+    
Sbjct: 61  AERKGYSGVGIYLREELDSAYFKHGIENKEFDPEGRVLSVYFKNLTVVSAYLPSGSSGDE 120

Query: 122 TK---YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
            +   +    S+           +E     +  GD+N+  +  D  N      ++ FT E
Sbjct: 121 RQRAKFRFLDSFGPWIDAMMRDHVETGHEYVICGDWNMAHKEIDLKNWKSNLKNSGFTPE 180

Query: 179 VRQSFQKLQNMG-FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
            R+    L     F D  R        Y++W     +W+KN G RID+ + +P   +L  
Sbjct: 181 EREWMNDLLERRGFVDVFRRLCMEADQYTWWSNRGQAWAKNVGWRIDYQIATPGIATLAK 240

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLD 262
            A I    R     SDH P+ +  +
Sbjct: 241 HAEIYKGQR----FSDHAPLTIDYE 261


>gi|289207257|ref|YP_003459323.1| exodeoxyribonuclease III Xth [Thioalkalivibrio sp. K90mix]
 gi|288942888|gb|ADC70587.1| exodeoxyribonuclease III Xth [Thioalkalivibrio sp. K90mix]
          Length = 257

 Score =  168 bits (425), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 70/263 (26%), Positives = 117/263 (44%), Gaps = 13/263 (4%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + + N N IRA        W+ +   D++C+QETK +      E      YH      
Sbjct: 1   MRILSMNANGIRAAARKGFFDWLPKTEADVVCIQETKAQIHQIQGEPFHPPGYHSAYVDA 60

Query: 62  -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +  Y+GVA+ S+ QP E++T +  ++ D + R++E  F      L + +LYLP G+   
Sbjct: 61  VKPGYSGVALYSRRQPDEVITRIGFEEADNEGRYVEMRFG----DLSVVSLYLPSGS-SG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             + D K  ++  F  + ++R++     +  GD+NI  +  D  N    + ++ F  E R
Sbjct: 116 DHRQDSKWRFLDFFRPWLAERMQDGREWVICGDWNIAHKEIDLRNWKSNQKNSGFLPEER 175

Query: 181 QSFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
                L +  G  D  R   D    Y++W     +W+KN G RID+ + +P         
Sbjct: 176 AWLDHLFDEIGMVDVFRRLDDRPEQYTWWSNRGQAWAKNVGWRIDYQIATPGIAETARDP 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
            I T  R     SDH P  +  D
Sbjct: 236 YIHTDDRY----SDHAPFWIDYD 254


>gi|313835987|gb|EFS73701.1| putative exodeoxyribonuclease III [Propionibacterium acnes
           HL037PA2]
 gi|314929662|gb|EFS93493.1| putative exodeoxyribonuclease III [Propionibacterium acnes
           HL044PA1]
 gi|314970515|gb|EFT14613.1| putative exodeoxyribonuclease III [Propionibacterium acnes
           HL037PA3]
 gi|328906267|gb|EGG26042.1| exodeoxyribonuclease III [Propionibacterium sp. P08]
          Length = 297

 Score =  168 bits (425), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 57/297 (19%), Positives = 101/297 (34%), Gaps = 37/297 (12%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + +A++N+N IRA +    + W+   + D++ LQE +    + P       +        
Sbjct: 1   MRIASFNINGIRAALKRGFSEWMAARDCDVVGLQEVRCRPADLPEGAFGDRHVSWAPGSL 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDL------------------------DVQARFIEAT 98
              NGVA+L++  P E+ +      +                                  
Sbjct: 61  AGRNGVALLTRTAPAEVRSWGTHLVMAPGQTPNLDEVVTGNTDGLPTELLPFAEEGRYIE 120

Query: 99  FTINTQTLRIGNLYLPHGNPITSTK----------YDDKISWIKRFLRFASQRLELEEPL 148
             +    L +  LYLP G     T                 +     R   +        
Sbjct: 121 VDLADSLLTVACLYLPKGATPDPTNEKAIAKQDRKMAFLAGFRDHLTRRCQECAAQGRHF 180

Query: 149 IFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL--QNMGFTDAIRATHDTHHLYS 206
           +  GD+NI  +  D  N    +++  F  E RQ F  +   +           D +  YS
Sbjct: 181 LVIGDFNIAHENADLKNWKANQHNEGFLPEERQWFDTIVSPDTLVDVLRAQHPDINGPYS 240

Query: 207 FWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +W +   ++  + G RID+ + SPE      +  ID       + SDH  V+V  D+
Sbjct: 241 WWSWRGKAFINDAGWRIDYHLASPELAKRAVTTEIDRDSSYAERTSDHAAVVVDYDV 297


>gi|42525008|ref|NP_970388.1| exodeoxyribonuclease [Bdellovibrio bacteriovorus HD100]
 gi|39577219|emb|CAE81042.1| exodeoxyribonuclease [Bdellovibrio bacteriovorus HD100]
          Length = 257

 Score =  168 bits (425), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 68/265 (25%), Positives = 117/265 (44%), Gaps = 15/265 (5%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNF--PFETLQSLNYH--IE 58
           + + +WNVN +R+    N   W ++   DI+CLQE K  D+      E      YH    
Sbjct: 1   MKMISWNVNGLRSVHRKNFREWFEKEKADIVCLQEIKITDEAIKKDEEFYHPAKYHSSWA 60

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
              +  Y+G+A+ SK +P ++   L     D++ R++EA F      + + N Y P+ + 
Sbjct: 61  FAEKAGYSGLALYSKKEPDDVRIGLGIPKFDIEGRWLEADFG----PITVVNSYWPN-SQ 115

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
              T+   K+ +     +      +    +I  GD+NI  +  D  NP     +A F  E
Sbjct: 116 REHTRLPFKLEFCAAAEKRLQALRKKGREVIICGDFNIAHKEIDLRNPKTNMKNAGFLPE 175

Query: 179 VRQSFQKLQN-MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
            R    +  + + + D+ R        Y++W Y      KN G R+D+ +++ EA+  L 
Sbjct: 176 ERAWMTRFLDKLEWVDSFRKFEQGPEHYTWWSYRPGVREKNIGWRLDYFLVNKEASDRLK 235

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLD 262
           +A       G    SDH PV ++L 
Sbjct: 236 AASHCPDVMG----SDHCPVRLTLK 256


>gi|86359550|ref|YP_471442.1| exodeoxyribonuclease III protein [Rhizobium etli CFN 42]
 gi|86283652|gb|ABC92715.1| exodeoxyribonuclease III protein [Rhizobium etli CFN 42]
          Length = 267

 Score =  168 bits (425), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 79/264 (29%), Positives = 117/264 (44%), Gaps = 9/264 (3%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64
           + TWN+NS+R R+  +  ++ ++ PDI+CLQETK  ++ FP   L+++ Y HI   GQK 
Sbjct: 5   ITTWNINSVRLRMPIVEQFVLKHRPDILCLQETKVPNELFPAAPLRAMGYDHIIIHGQKG 64

Query: 65  YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124
           Y+GVAI S+   +E             AR I A F    + +R+ N Y+P G        
Sbjct: 65  YHGVAIASRIPLMEDHR--QDYCGVGDARHISAVFERGNRRVRLHNFYVPAGGDEPDRTI 122

Query: 125 DDKISWIKRFLRFASQRLELEEPLI---FAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
           + K      F+          E        GD NI P  HD ++          T     
Sbjct: 123 NPKFGHKLDFIEEMKLLKANGEANTSAILVGDLNIAPLEHDVWSHKQLLKIVSHTPVETD 182

Query: 182 SFQKLQNMGFTDAIRATH--DTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHS 238
              ++   G    +   H   +  LY++W Y A  W   ++G R+DHI  S +    L  
Sbjct: 183 GLLEVMKRGAWLDLMRQHVPASEKLYTWWSYRAKDWQAADRGRRLDHIWSSSDLGPHLQR 242

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
             I  + RGW +PSDH PV    D
Sbjct: 243 IEILKEARGWDRPSDHVPVTAHFD 266


>gi|302382164|ref|YP_003817987.1| exodeoxyribonuclease III Xth [Brevundimonas subvibrioides ATCC
           15264]
 gi|302192792|gb|ADL00364.1| exodeoxyribonuclease III Xth [Brevundimonas subvibrioides ATCC
           15264]
          Length = 264

 Score =  168 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 78/270 (28%), Positives = 121/270 (44%), Gaps = 15/270 (5%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCG 61
           ++ VATWN+NS+R RI  +A ++ E+  D++CLQE K  +  FP      +   H++  G
Sbjct: 1   MLRVATWNINSVRLRIDQVARFVAESGTDVLCLQEIKCLEDQFPRNAFADMGLPHLKIAG 60

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           QK ++GVAI S+       T                  ++    + I N Y+P G  +  
Sbjct: 61  QKGWHGVAIASRRPIEPSET------FQSCKLGHARCVSVQVAGVDIQNFYIPAGGDVPD 114

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLI---FAGDYNIIPQPHDCYNPIIWENDACFTL- 177
            + + K      F    +  +  ++        GD+NI P   D +N          T  
Sbjct: 115 RELNPKFDHKMDFYEQLTATVAAQDRSRPLLMCGDFNIAPSEFDVWNHRYMSKIVSHTPI 174

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLY-SFWDYYADSWSKN-KGIRIDHIMLSPEATSL 235
           EV    +      FTD +R          S+W Y A+ + K+ +G+R+DHI  SP  T  
Sbjct: 175 EVETLNRLQVAGAFTDVVREAFPEPQKLASWWSYRAEDFRKSARGLRLDHIWTSPGLTPA 234

Query: 236 LH--SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +   SA I    R WT+PSDH P+ V LD+
Sbjct: 235 VVAGSATIHEPVRAWTQPSDHCPITVDLDV 264


>gi|84515771|ref|ZP_01003132.1| exodeoxyribonuclease III, putative [Loktanella vestfoldensis SKA53]
 gi|84510213|gb|EAQ06669.1| exodeoxyribonuclease III, putative [Loktanella vestfoldensis SKA53]
          Length = 262

 Score =  168 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 82/264 (31%), Positives = 116/264 (43%), Gaps = 10/264 (3%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQK 63
           T+ATWN+NS+R R   +   ++E  PDI+CLQE K+     P     +L Y H+   GQK
Sbjct: 4   TLATWNINSVRLREELVLQMLREEQPDILCLQECKSPVDLIPVAQFHALGYTHMVARGQK 63

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            YNGVAI+SK           G +                  + I N Y+P G  I    
Sbjct: 64  GYNGVAIISKLPLQ-----EAGAEDYAALGHARHVAARLENGVTIHNHYVPAGGDIPDRA 118

Query: 124 YDDKISWIKRF--LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180
            + K      +      +      +  I  GD NI P+  D +N          T  EV 
Sbjct: 119 VNAKFGNKLDYLTDMRDAYHASRPQKSILVGDLNIAPREDDVWNHKALLKVVSHTPIEVD 178

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHSA 239
              Q +   G+ D  R      +LYS+W Y +  W   +KG R+DH+  +P+ +   H +
Sbjct: 179 HFGQVMDAGGWVDVTRQDIPQGNLYSWWSYRSPDWDAADKGRRLDHVWATPDISGAAHGS 238

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
           R+    RGW KPSDH PV  S D+
Sbjct: 239 RVLRHVRGWDKPSDHAPVFASFDL 262


>gi|303328283|ref|ZP_07358721.1| exodeoxyribonuclease III [Desulfovibrio sp. 3_1_syn3]
 gi|302861613|gb|EFL84549.1| exodeoxyribonuclease III [Desulfovibrio sp. 3_1_syn3]
          Length = 268

 Score =  168 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 69/275 (25%), Positives = 104/275 (37%), Gaps = 24/275 (8%)

Query: 4   VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET-- 59
           + + +WNVN +RA         W    +  I+ LQETK   +    E      +      
Sbjct: 3   IKLVSWNVNGLRALSAKPE-WEWFARTDAQIVALQETKAHPEQLKEELASPEGWEAHWSS 61

Query: 60  -CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN- 117
              +K Y+GVA+ S+  P+ +   LP      + R +   F          N Y P+G  
Sbjct: 62  SHVKKGYSGVAVFSRMTPLAVRAELPDPQWQGEGRLLHLEFP----DFHFFNGYFPNGGA 117

Query: 118 --------PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
                   P    K               ++     +P++  GD+NI  Q  D   P   
Sbjct: 118 EELDENGKPTGRFKRVPYKMGFFEAFLNYAEECRKSKPIVVCGDFNIAHQAIDLARPKQN 177

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIML 228
             +  F  E R    +   MG+ D  R  H D    YS+W Y   +  KN G RID+  +
Sbjct: 178 VKNTGFLPEERAFLDRFTAMGYVDTFRKVHGDQPDQYSWWSYKTRAREKNIGWRIDYFFV 237

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           S E    +  A I+    G    SDH PV + L++
Sbjct: 238 SEELAPAVSDAWIENNVYG----SDHCPVGLELEL 268


>gi|162329921|pdb|2O3C|A Chain A, Crystal Structure Of Zebrafish Ape
 gi|162329922|pdb|2O3C|B Chain B, Crystal Structure Of Zebrafish Ape
 gi|162329923|pdb|2O3C|C Chain C, Crystal Structure Of Zebrafish Ape
          Length = 282

 Score =  168 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 75/262 (28%), Positives = 124/262 (47%), Gaps = 16/262 (6%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQ----SLNYHIE 58
           + + +WNV+ +RA +  N   W+++ +PDI+CLQETK  +K  P +          Y   
Sbjct: 27  MKITSWNVDGLRAWVKKNGLDWVRKEDPDILCLQETKCAEKALPADITAMPEYPHKYWAG 86

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
           +  ++ Y+GVA+L K +P+ +   +  ++ D + R I A F                   
Sbjct: 87  SEDKEGYSGVAMLCKTEPLNVTYGIGKEEHDKEGRVITAEFPDF-----FLVTAYVPNAS 141

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
               + D + +W   F  +    L+  +PL+  GD N+  Q  D  NP     +A FT E
Sbjct: 142 RGLVRLDYRKTWDVDFRAY-LCGLDARKPLVLCGDLNVAHQEIDLKNPKGNRKNAGFTPE 200

Query: 179 VRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
            R+ F +L   GFTD+ R  +    + Y+FW Y  ++ SKN G R+D+ +LS      L 
Sbjct: 201 EREGFTQLLEAGFTDSFRELYPDQAYAYTFWTYMMNARSKNVGWRLDYFVLSSALLPGLC 260

Query: 238 SARIDTKPRGWTKPSDHTPVIV 259
            ++I     G    SDH P+ +
Sbjct: 261 DSKIRNTAMG----SDHCPITL 278


>gi|52840885|ref|YP_094684.1| exodeoxyribonuclease III [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
 gi|52627996|gb|AAU26737.1| exodeoxyribonuclease III [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
          Length = 260

 Score =  168 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 74/264 (28%), Positives = 124/264 (46%), Gaps = 14/264 (5%)

Query: 4   VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKN-FPFETLQSLNYHIETCG 61
           + V ++N N IR+   +    W+   + D +C+QETK++ +   P E     +Y  +   
Sbjct: 1   MKVISFNANGIRSSARNGFYDWLVGQDVDFVCIQETKSQVEQLIPEELYFPRDYFCDYFD 60

Query: 62  --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GVAI SKY+P+ IV  L  D  D + R+I+  +   +                
Sbjct: 61  AEKKGYSGVAIYSKYKPMRIVKGLGFDYCDKEGRYIQFDYPKLSV-----VSLYLPSGTS 115

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              + + K +++++F R           LI  GDYNI  +  D  N    + ++ F  E 
Sbjct: 116 GDDRQEVKYAFLEQFARHLMNLKNEGRELIICGDYNIAHKKIDLKNWRGNQKNSGFLPEE 175

Query: 180 RQSFQKLQ-NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R    +L  +MGF DA R  +     Y++W Y A +W KN G RID+ +++P  T  +  
Sbjct: 176 RAWMDELFGSMGFVDAFRVHNQEEEQYTWWSYRARAWEKNVGWRIDYQVITPGLTEYVAD 235

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
           +RI  + R     SDH P+++   
Sbjct: 236 SRIFREAR----FSDHAPLMIEYK 255


>gi|226942126|ref|YP_002797200.1| ExoA [Laribacter hongkongensis HLHK9]
 gi|226717053|gb|ACO76191.1| ExoA [Laribacter hongkongensis HLHK9]
          Length = 257

 Score =  168 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 58/263 (22%), Positives = 105/263 (39%), Gaps = 13/263 (4%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           +  + + N+N IR+        W+     D++C+QE K +  +   E      +      
Sbjct: 1   MTRIVSANLNGIRSATQKGFFDWLATTGADVVCVQELKAQLADLKPEHRTPAGFPFAAFH 60

Query: 62  QKS---YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
                 Y+GV + ++ +P  +V  L  D +D + R++ A F      L + +LYLP G+ 
Sbjct: 61  CAEKKGYSGVGLYARREPDRVVEGLGIDWIDSEGRYLRADFGT----LSVISLYLPSGSS 116

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
                   K  ++  FL            ++  GD+NI     D  N      ++ F  E
Sbjct: 117 SEER-QAVKFRFMDAFLPHLDALRTEGRDIVLCGDWNIAHNEIDLKNWKGNLKNSGFLPE 175

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
            R         G+ D  R  +     Y++W     +++K+ G RID+ + +    +   S
Sbjct: 176 ERAWIGARFAEGWADVWRQLYPEAPGYTWWSQRGQAYAKDVGWRIDYQIATAGLAARAQS 235

Query: 239 ARIDTKPRGWTKPSDHTPVIVSL 261
           A +    R     SDH P++V  
Sbjct: 236 AFVYKDTR----FSDHAPLVVDY 254


>gi|110677459|ref|YP_680466.1| exodeoxyribonuclease III, putative [Roseobacter denitrificans OCh
           114]
 gi|109453575|gb|ABG29780.1| exodeoxyribonuclease III, putative [Roseobacter denitrificans OCh
           114]
          Length = 262

 Score =  168 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 76/261 (29%), Positives = 110/261 (42%), Gaps = 6/261 (2%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64
           +ATWN+NS+R R   +   + E  PD++CLQE K+     P E   +  Y H+   GQK 
Sbjct: 5   LATWNINSVRLREALVLKLMTEELPDVLCLQECKSPVDKMPLEAFAAAGYGHVVARGQKG 64

Query: 65  YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124
           YNGVAILSK    E            +         +      +        +   + K+
Sbjct: 65  YNGVAILSKIPMQEAAAEDFAGLGHARHIAGRLENGVTVHNFYVPAG-GDVADREVNEKF 123

Query: 125 DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVRQSF 183
             K+ ++     +     +  E  I  GD NI P+  D ++          T  EV    
Sbjct: 124 GQKLDYLTEMRDW--FHAQKPEKSILVGDLNIAPREDDVWDHKKLLKVVSHTPIEVEHLA 181

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHSARID 242
           Q     G+ D  R       LYS+W Y A  W   +KG R+DH+  + +  +  H +RI 
Sbjct: 182 QTQDAGGWVDITRQDIPEGRLYSWWSYRAADWDAADKGRRLDHVWATSDIAAAGHDSRIL 241

Query: 243 TKPRGWTKPSDHTPVIVSLDI 263
              RGW KPSDH PV    D+
Sbjct: 242 RGARGWEKPSDHAPVFAQFDL 262


>gi|163734305|ref|ZP_02141745.1| exodeoxyribonuclease III, putative [Roseobacter litoralis Och 149]
 gi|161392313|gb|EDQ16642.1| exodeoxyribonuclease III, putative [Roseobacter litoralis Och 149]
          Length = 262

 Score =  168 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 77/263 (29%), Positives = 113/263 (42%), Gaps = 10/263 (3%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64
           +ATWN+NS+R R   +   + E  PD++CLQE K+     P +   +  Y H+   GQK 
Sbjct: 5   LATWNINSVRLREGLVLKLMTEEAPDVLCLQECKSPVDKMPLDAFAAAGYAHVVARGQKG 64

Query: 65  YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124
           YNGVAILSK    E            +              + + N Y+P G  +   + 
Sbjct: 65  YNGVAILSKIPMEEAAAEDFAALGHARHIAGRLENG-----VTVHNFYVPAGGDVADREV 119

Query: 125 DDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL-EVRQ 181
           ++K      +L         ++P      GD NI P+  D ++          T  EV  
Sbjct: 120 NEKFGQKLDYLTEMRDWFHTQKPEKSILVGDLNIAPREDDVWDHKKLLKVVSHTPIEVEH 179

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHSAR 240
             Q     G+ D  R       L+S+W Y A  W   +KG R+DH+  + +  +  H +R
Sbjct: 180 LAQTQDAGGWVDITRQDIPEGKLFSWWSYRAADWDAADKGRRLDHVWATSDIAAAGHDSR 239

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263
           I    RGW KPSDH PV    D+
Sbjct: 240 IVRGARGWEKPSDHAPVFAQFDL 262


>gi|157964331|ref|YP_001499155.1| exodeoxyribonuclease III [Rickettsia massiliae MTU5]
 gi|157844107|gb|ABV84608.1| Exodeoxyribonuclease III [Rickettsia massiliae MTU5]
          Length = 292

 Score =  168 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 80/271 (29%), Positives = 124/271 (45%), Gaps = 7/271 (2%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETC 60
           S++ + TWN+NS+R RI  L     E+ PDII LQETK  D  FP E ++++ Y H+   
Sbjct: 20  SLMKIVTWNINSLRLRIDLLRKLAYEHQPDIILLQETKVADSLFPLEVIKNIGYEHVIYS 79

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           GQKSYNGVAI+SK+    + +    +        I     I+   +          +   
Sbjct: 80  GQKSYNGVAIISKFPLNNVFSLELYNSDKRHIAAIVNDIEIHNFYV---PAGGDIPDIEV 136

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
           +TK+  K+ +++    + +      + +I  GD NI P  HD ++     N    T   R
Sbjct: 137 NTKFKHKLEYVRLMQEWLTTNRTKNDKMIIVGDLNIAPHEHDVWSSKQLRNVISHTDIER 196

Query: 181 QSFQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLLH 237
               +LQN       +          Y++W Y    W K NKG R+DHI +S      L 
Sbjct: 197 SLLVELQNVLGFIDSSRHFVSLDTKFYTWWSYRNIDWKKSNKGRRLDHIWVSDNLKDALF 256

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268
           S  +  + R W+ PSDH P  V+ ++    +
Sbjct: 257 SMHLLPEARDWSPPSDHVPYFVTFNLQMSPR 287


>gi|146329616|ref|YP_001209809.1| exodeoxyribonuclease III [Dichelobacter nodosus VCS1703A]
 gi|146233086|gb|ABQ14064.1| exodeoxyribonuclease III [Dichelobacter nodosus VCS1703A]
          Length = 258

 Score =  168 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 64/264 (24%), Positives = 111/264 (42%), Gaps = 13/264 (4%)

Query: 1   MSVVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFE--TLQSLNYHI 57
           MS   + T+N N IRA        W+   NPD +C+QETK +              + + 
Sbjct: 1   MS-FKMITFNANGIRAAQRKGFFDWLATQNPDAVCIQETKAQRHQLEDNPVFFPLAHNYY 59

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
               +K Y+GVA+  K +P ++   +   D+D + R++EA +   +           H  
Sbjct: 60  HDAQRKGYSGVALYLKKEPDQVRYGIGWADIDEEGRYLEARYGDLSLI-----SLYMHSG 114

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
              + + + K S++ R L +  +  +    +I  GD NI     D  N     +++ F  
Sbjct: 115 TSGAHRQEKKESFMVRLLPYLEELAQSGRRVIVCGDINIAHCERDIKNWRGNIHNSGFLP 174

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
             RQ    L    + D  R  +   H Y++W     + + N G RID+ ++S    + + 
Sbjct: 175 HERQWLTDLFAGAYKDGFRLKNQNDHEYTWWSQRGKARANNAGWRIDYQIVSNNLAADVL 234

Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261
           SA I          SDH P+I++ 
Sbjct: 235 SAEIYRA----QNFSDHAPLILTY 254


>gi|329847403|ref|ZP_08262431.1| exodeoxyribonuclease III [Asticcacaulis biprosthecum C19]
 gi|328842466|gb|EGF92035.1| exodeoxyribonuclease III [Asticcacaulis biprosthecum C19]
          Length = 265

 Score =  168 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 81/271 (29%), Positives = 129/271 (47%), Gaps = 17/271 (6%)

Query: 4   VTV--ATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETC 60
           + +  ATWNVNS+R R+  + A++ +   DI+CLQE K ++  FP++  ++L + HI   
Sbjct: 1   MRLSFATWNVNSVRLRMPQIQAFLAQTEIDILCLQEIKCQEHEFPYDAFRALGFEHIHVA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           GQK ++GVAI+SK           GD L    R       I    + I N Y+P G  + 
Sbjct: 61  GQKGWHGVAIVSKVPFE------SGDLLPFCRRGEARAQAIRVDNVDIWNFYIPAGGDVP 114

Query: 121 STKYDDKISWIKRFLRFASQRL---ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
               +DK      F       L     + PL+  GD NI P   D ++          T 
Sbjct: 115 DRTTNDKFDHKLEFYERLCTHLAQRNRDHPLLICGDLNIAPGEFDVWSHRQMLRVVSHTP 174

Query: 178 -EVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADS-WSKNKGIRIDHIMLSPEATS 234
            E+      +    F D  R  +     ++++W Y A    + N+G+R+DH++L+P   +
Sbjct: 175 LEIEAFGNFMACGDFHDPFRVAYPEPQKIFTWWSYRASDYRASNRGLRLDHVLLNPALMA 234

Query: 235 LLHS--ARIDTKPRGWTKPSDHTPVIVSLDI 263
            + +  A+I    RGWT+PSDH P  V+ +I
Sbjct: 235 RVANLTAKIHDDVRGWTQPSDHVPAQVTFEI 265


>gi|320163204|gb|EFW40103.1| APEX nuclease [Capsaspora owczarzaki ATCC 30864]
          Length = 429

 Score =  168 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 64/261 (24%), Positives = 112/261 (42%), Gaps = 12/261 (4%)

Query: 5   TVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFE-TLQSLNYHIETCGQ 62
            +A WNVN ++  I      +++   PD++C+QETK  +   P +  +     +  +  +
Sbjct: 179 KIACWNVNGLKNAIKEGCLQYLEYEKPDVLCIQETKCGEGEIPADSAVPGYYGYWYSAQK 238

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           + Y G  + SK QPI +   L   + D + R I A F        +       G  + + 
Sbjct: 239 RGYAGTGMYSKTQPIRVSFGLNVPEHDTEGRVITAEFA---DFYLVTAYVPNSGQKLETL 295

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
            Y        R        L+ ++P++  GD N+     D  NP   +  A FT + R+ 
Sbjct: 296 PYRQTWDVAFRTY---LLSLDAKKPVVLCGDLNVAHNEIDLKNPKTNKRSAGFTPQEREG 352

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F  +    F D+ R  +     YSFW Y  +S + N G R+D+ ++S      +  ++I 
Sbjct: 353 FTTILGTEFVDSFRVLYPEESAYSFWSYRHNSRALNVGWRLDYFVVSQRFMQSVADSQI- 411

Query: 243 TKPRGWTKPSDHTPVIVSLDI 263
              R     SDH P+++ L +
Sbjct: 412 ---RSQVYGSDHCPIVLHLSL 429


>gi|237750354|ref|ZP_04580834.1| exodeoxyribonuclease LexA [Helicobacter bilis ATCC 43879]
 gi|229373884|gb|EEO24275.1| exodeoxyribonuclease LexA [Helicobacter bilis ATCC 43879]
          Length = 255

 Score =  168 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 67/261 (25%), Positives = 107/261 (40%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      +    + D+ C+QE+K       F              +
Sbjct: 1   MKMISWNVNGLRACMTKGFMDFFNTIDADVFCIQESKMHRSQSDF-VFDGYYQFWNEAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G  ILSK +P+ +   +     D + R I A +           + +   N     
Sbjct: 60  KGYSGTIILSKTEPLSVCNDMGIAHHDKEGRIIVAEYA------TFFLVNVYTPNSKREL 113

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +        +   R   + LE  +P+I  GD N+  +  D  NP     +A FT E R+ 
Sbjct: 114 ERLTYRQEWEDDFRSFLKGLEQYKPVIVCGDLNVAHKEIDLKNPKTNRRNAGFTDEEREK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
              L + GF D+ R  +    H Y++W Y   +   N G RID+ +LS      L  A I
Sbjct: 174 MSVLLDSGFIDSYRYFYPDKEHAYTWWSYMGKARQNNTGWRIDYFLLSRCLAKNLKEAHI 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
             +  G    SDH PV + +D
Sbjct: 234 YPEIMG----SDHCPVGIVID 250


>gi|15892269|ref|NP_359983.1| exodeoxyribonuclease III [Rickettsia conorii str. Malish 7]
 gi|15619409|gb|AAL02884.1| exodeoxyribonuclease III [Rickettsia conorii str. Malish 7]
          Length = 286

 Score =  168 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 79/271 (29%), Positives = 125/271 (46%), Gaps = 7/271 (2%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETC 60
           S++ + TWN+NS+R RI  L     E+ PDII LQETK  D  FP E ++++ Y H+   
Sbjct: 14  SLMKIVTWNINSLRLRIDLLRKLAYEHQPDIILLQETKVADSLFPLEVIKNIGYEHVIYS 73

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           GQKSYNGVAI+SK+    + +    +        I     I+   +          +   
Sbjct: 74  GQKSYNGVAIISKFPLNNVFSLELYNSDKRHIAAIVNDIEIHNFYV---PAGGDIPDIEV 130

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
           +TK+  K+ +++    + +      + +I  GD NI P  HD ++     N    T   R
Sbjct: 131 NTKFKHKLEYVRLMQEWLTTNRTKNDKMIIVGDLNIAPHEHDVWSSKQLRNVISHTDIER 190

Query: 181 QSFQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLLH 237
               +LQN       +          Y++W Y    W K N+G R+DHI +S      L 
Sbjct: 191 SLLVELQNALGFIDSSRHFVSLDEKFYTWWSYRNIDWKKSNRGRRLDHIWVSDNLKGALF 250

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268
           S  + ++ R W+ PSDH P  V+ ++    +
Sbjct: 251 SMHLLSEARDWSSPSDHVPYFVTFNLQMSSR 281


>gi|297583616|ref|YP_003699396.1| exodeoxyribonuclease III [Bacillus selenitireducens MLS10]
 gi|297142073|gb|ADH98830.1| exodeoxyribonuclease III [Bacillus selenitireducens MLS10]
          Length = 254

 Score =  168 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 57/259 (22%), Positives = 108/259 (41%), Gaps = 12/259 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA I     ++ +E   D+  +QE K ++     + LQ    +     +
Sbjct: 1   MKLISWNVNGLRACIRKGFLSFFEEAGADLFAVQEIKLQEGQVDLD-LQGYRQYWNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G A+ +K +P+ +  +  G++       I      +   + +              
Sbjct: 60  KGYSGTAVFTKVEPLRVFRNGVGNERQQSEGRILTLEFASFFLVNVYTPNSQRDLARLHE 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +        +       Q LE E+P+I  GD N+  +  D  N      ++ FT E R  
Sbjct: 120 RLQ-----WEDAFYAYLQELENEKPVIVCGDMNVAHEEIDLRNAKSNRGNSGFTTEERAK 174

Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             +LQ+    D+ R  +      Y++W Y      +N G RID+ ++S +  S ++   I
Sbjct: 175 MTRLQSEWLIDSYRYYYPDQEGAYTWWSYMKTVRERNIGWRIDYFLVSDKLKSAMNDVSI 234

Query: 242 DTKPRGWTKPSDHTPVIVS 260
            +   G    SDH P+ ++
Sbjct: 235 YSDVLG----SDHCPIGLT 249


>gi|303232423|ref|ZP_07319115.1| exodeoxyribonuclease III [Atopobium vaginae PB189-T1-4]
 gi|302481507|gb|EFL44575.1| exodeoxyribonuclease III [Atopobium vaginae PB189-T1-4]
          Length = 259

 Score =  168 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 77/263 (29%), Positives = 118/263 (44%), Gaps = 15/263 (5%)

Query: 5   TVATWNVNSIRARIH---NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
            +A+WNVN +RA +    N    ++  N DII +QETK ++     + L           
Sbjct: 8   RLASWNVNGLRAVMKKDPNFIDVVQSLNVDIIGIQETKLQEGQIALD-LPGYTQTWSYAE 66

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G A+ SK  P++ +  +     D + R     F          N+Y P+     +
Sbjct: 67  RKGYSGTAVFSKEAPLQTIHTIGCSAADNEGRVCALEF----NDFWFVNVYTPNSKNELA 122

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
              +          R     L+ ++P+I  GD+N   +  D  NP     +A F+ E R 
Sbjct: 123 RLDER--MEWDEAYRSFLHTLDAKKPVITCGDFNCAHEEIDLKNPATNHQNAGFSDEERA 180

Query: 182 SFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           SF KL N GFTD  RA H T    YS+W Y   S  +N G RID+ ++S    + +  AR
Sbjct: 181 SFTKLLNTGFTDTFRAAHPTLTDAYSWWSYRMRSRERNAGWRIDYFLVSDRIKNQVSDAR 240

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263
           I     G    SDH PV +++ +
Sbjct: 241 IHADVYG----SDHCPVGLTITL 259


>gi|254445623|ref|ZP_05059099.1| exodeoxyribonuclease III [Verrucomicrobiae bacterium DG1235]
 gi|198259931|gb|EDY84239.1| exodeoxyribonuclease III [Verrucomicrobiae bacterium DG1235]
          Length = 251

 Score =  168 bits (424), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 70/260 (26%), Positives = 103/260 (39%), Gaps = 12/260 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNF-PFETLQSLNYHIETCG 61
           +   +WNVN IRA +      +    + D ICLQETK        F+   S         
Sbjct: 1   MKFVSWNVNGIRAIMKKGAMDFFDGCDADFICLQETKATADIVKDFDWGVSKTVLANEAE 60

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G AI+++ +P  +   +  +  D + R + A +                   +  
Sbjct: 61  KKGYSGTAIIARTEPESVSYGIGIEKHDGEGRVVTAEYPEFFIVTVYTPNAQNELRRLPY 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            +         R      + LE  +P+IF GD N+     D  NP     +A FT E R 
Sbjct: 121 RQ------EWDRDFLAYVKALEATKPVIFCGDLNVAHTEDDLANPKTNRKNAGFTDEERA 174

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
            F  +   GF D  R        YS+W Y   + S+N G RID+ M+S      L SA I
Sbjct: 175 GFDDIVAAGFVDTFREFTQGKGHYSWWSYRGGARSRNVGWRIDYFMISESLRPQLKSASI 234

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
             +  G    SDH PV +  
Sbjct: 235 LPEVLG----SDHCPVEMVF 250


>gi|83944983|ref|ZP_00957349.1| exodeoxyribonuclease III [Oceanicaulis alexandrii HTCC2633]
 gi|83851765|gb|EAP89620.1| exodeoxyribonuclease III [Oceanicaulis alexandrii HTCC2633]
          Length = 269

 Score =  167 bits (423), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 75/274 (27%), Positives = 125/274 (45%), Gaps = 19/274 (6%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIET 59
           M+  T+ATWN+NS+R R  ++A+++KE  PD+I LQE K     FP +  + + + H+  
Sbjct: 1   MTPFTLATWNINSVRLRAPHVASFVKEAQPDVIALQEIKCLPDQFPRKEFEEMGFPHLHI 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            GQK  +GVAI S+     +                     +    + + N Y+P G   
Sbjct: 61  VGQKGLHGVAIASRTPIEPLDQDKLCPRG------EARFQRVRVNGVELQNYYIPAGGDE 114

Query: 120 T----STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
                + ++  K+ +++R   +A+ R +   PL+  GD+NI P+ HD ++          
Sbjct: 115 PDPEINPRFAHKLEFLERLKGYAADRAKENAPLVLVGDFNIAPREHDVWSHKQLLKVVSH 174

Query: 176 TLEVRQSFQKLQNMGFTDAIRA--THDTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEA 232
           T    ++       G    +      +   L+++W Y +  W + N+G R+DHI +SP  
Sbjct: 175 TPVEVEALNAWLEAGEYIDVARELIDEPEKLFTWWSYRSKDWRASNRGRRLDHIWVSPAL 234

Query: 233 TSLLH-----SARIDTKPRGWTKPSDHTPVIVSL 261
                     S RI    R W KPSDH PV + L
Sbjct: 235 KDAALKDGRDSFRIWDNARDWEKPSDHAPVTLRL 268


>gi|330836714|ref|YP_004411355.1| exodeoxyribonuclease III Xth [Spirochaeta coccoides DSM 17374]
 gi|329748617|gb|AEC01973.1| exodeoxyribonuclease III Xth [Spirochaeta coccoides DSM 17374]
          Length = 252

 Score =  167 bits (423), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 73/261 (27%), Positives = 114/261 (43%), Gaps = 13/261 (4%)

Query: 5   TVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
              +WNVN IR+ +      +    + DI CLQETK ++     E L   + +     +K
Sbjct: 3   KFVSWNVNGIRSCLGKGFLDYFFSTDADIFCLQETKLQEGQHDIE-LPDYHQYWNYAQKK 61

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            Y+G A+ SK +P+ +   +     D + R I A +                 +     +
Sbjct: 62  GYSGTALFSKEKPVRVTFGIAPFIEDAEGRVITAEYPA-----YFLVCVYTPNSQRELLR 116

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
            D ++ W   F  +    LE  +P+   GD N+  +  D  NP     +A FT E R  F
Sbjct: 117 LDYRMKWDDAFRAYILS-LEAMKPVFVCGDLNVAHKEIDLKNPKSNVRNAGFTQEERDKF 175

Query: 184 QKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
               + GFTD+ R  +      YS+W Y A++ +KN G RID+ + S      +H + ID
Sbjct: 176 SLFLDAGFTDSFRHLYPHVIDRYSWWSYMANARAKNIGWRIDYWLTSNRYADKIHDSLID 235

Query: 243 TKPRGWTKPSDHTPVIVSLDI 263
               G    SDH PV + LD+
Sbjct: 236 DHIPG----SDHAPVALLLDL 252


>gi|326315164|ref|YP_004232836.1| exodeoxyribonuclease III Xth [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323372000|gb|ADX44269.1| exodeoxyribonuclease III Xth [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 271

 Score =  167 bits (423), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 71/272 (26%), Positives = 117/272 (43%), Gaps = 16/272 (5%)

Query: 2   SVVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFP--FETLQSLNYHIE 58
           S+  + + N+N IR A    + AWI E  PD IC+QE K +  +    FETL  L  H  
Sbjct: 4   SLFKLTSLNLNGIRSAASKGVEAWIAETRPDCICVQEIKAQSADMEGRFETLAGLKGHFH 63

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
              +K Y+GV I ++++P ++       + D + R++EA F    + L I + Y P G+ 
Sbjct: 64  YATKKGYSGVGIYTRHEPTDVRVGYGSSEFDAEGRYVEARFDTPARKLSIISAYFPSGSS 123

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
               +                 R++ E   I  GD NI  Q  D  N    + ++ F  E
Sbjct: 124 GPERQLA--KFRFLAEFHVHLMRVKEEREFILCGDVNIAHQQIDLKNWRSNQKNSGFLPE 181

Query: 179 VRQSFQKLQNMGFTD-------AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
            R+   KL +             +     T   Y++W     +++ N G R+D+ + +P 
Sbjct: 182 EREWMTKLLHQTDPGGGLVDVYRLLQPDTTETAYTWWSNRGQAYANNVGWRLDYHLATPA 241

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             +L  +  I  +     K SDH P+ V  D+
Sbjct: 242 IAALARTESIYKQ----QKFSDHAPITVGYDL 269


>gi|323357077|ref|YP_004223473.1| exonuclease III [Microbacterium testaceum StLB037]
 gi|323273448|dbj|BAJ73593.1| exonuclease III [Microbacterium testaceum StLB037]
          Length = 282

 Score =  167 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 70/280 (25%), Positives = 115/280 (41%), Gaps = 20/280 (7%)

Query: 2   SVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
             V + + NVN IRA +   +  W++ +  DI+ LQE +   +    E L       +  
Sbjct: 3   RSVRIVSINVNGIRAAVRKGMVEWLEASGADIVTLQEVRATAEQL-AEALPGWRIVNDEA 61

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            QK   GVAI+S+   +E  THL  + LD   R+IE  F I+ +T+ I + Y+  G  + 
Sbjct: 62  LQKGRAGVAIISRLPGVETRTHLGPEPLDASGRWIETDFDIDGETVTIVSAYVHSGE-VD 120

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
           + K D K  ++    +  +      E  +  GD N+  +  D  N      +A F    R
Sbjct: 121 TPKQDAKWLFLDAMEQRLATLKAERELALVTGDLNVGHRELDIKNWRGNRKNAGFLPRER 180

Query: 181 QSFQKLQN-----------------MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223
             F +                           R   +    Y+FW     ++  + G RI
Sbjct: 181 AYFDRFFGPAGEQVEGVDGSVGTGLGWVDVGRRRMGEVEGPYTFWSMRGKAFDTDSGWRI 240

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           D+ + +P     +   R+D  P   T+ SDH+PVIV   +
Sbjct: 241 DYHVATPALAERVTDYRVDRAPSYDTRWSDHSPVIVDYTL 280


>gi|313816882|gb|EFS54596.1| exodeoxyribonuclease III [Propionibacterium acnes HL059PA1]
 gi|315100096|gb|EFT72072.1| exodeoxyribonuclease III [Propionibacterium acnes HL059PA2]
          Length = 317

 Score =  167 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 61/297 (20%), Positives = 105/297 (35%), Gaps = 37/297 (12%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + +A++N+N IRA +    +  ++  + D+I LQE +    + P       +        
Sbjct: 21  MRIASFNINGIRAALKRGFSERMEARDCDVIGLQEVRCRPADLPEGAFGDRHVSWAPGSL 80

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDL------------------------DVQARFIEAT 98
              NGVA+L++  P E+ +      +                                  
Sbjct: 81  AGRNGVALLTRTAPAEVRSWGTHLVMAPGQAPTPAQALTGNTDGLPTELLPFADEGRYIE 140

Query: 99  FTINTQTLRIGNLYLPHGNPITS----------TKYDDKISWIKRFLRFASQRLELEEPL 148
             +    L +  LYLP G                K      +    +R   +        
Sbjct: 141 VDLADTPLTVACLYLPKGATPDPANEKTIAKQDRKMAFLTGFRDHLVRRRQECTTQGRHF 200

Query: 149 IFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL--QNMGFTDAIRATHDTHHLYS 206
           +  GD+NI  +  D  N    + +  F  E RQ F  +   +           DT+  YS
Sbjct: 201 LVMGDFNIAHENADLKNWKANQRNEGFLPEERQWFDTILSPDTLIDVVRAQHPDTNGPYS 260

Query: 207 FWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +W +   ++  + G RID+ + SPE  S   +A ID  P    + SDH  V+V  D+
Sbjct: 261 WWSWRGKAFVNDAGWRIDYHLASPELASKAITAEIDRDPSYSERTSDHAAVVVDYDL 317


>gi|239813296|ref|YP_002942206.1| exodeoxyribonuclease III Xth [Variovorax paradoxus S110]
 gi|239799873|gb|ACS16940.1| exodeoxyribonuclease III Xth [Variovorax paradoxus S110]
          Length = 267

 Score =  167 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 65/270 (24%), Positives = 111/270 (41%), Gaps = 16/270 (5%)

Query: 3   VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFP--FETLQSLNYHIET 59
           +  + + N+N +R A    +A W+ E  PD IC+QE + +  +    FE +  L  H   
Sbjct: 1   MFKLTSLNLNGLRSAATKGVADWVAELAPDCICMQEIRVQASDIEGRFEEMAGLKGHFHF 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y G AI +++ P  +V      + D + R++E  F    + L I + Y P G+  
Sbjct: 61  AEKKGYAGTAIYTRHAPSAVVVGWGDAEFDAEGRYLELRFDTPRRKLSIISCYFPSGSSG 120

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                 +      +        L+ E   I  GD NI  +  D  N    + ++ F  E 
Sbjct: 121 EER--QEAKFRFLKGFFPHLTALKKEREFILCGDINIAHKEIDLKNWRGNQKNSGFLPEE 178

Query: 180 RQSFQKLQNMGFTD-------AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
           R    +L + G           +     T   Y++W     +++ N G R+D+ + +P  
Sbjct: 179 RAWMTRLLDAGADGAGLVDVYRLLKPDTTGEAYTWWSNRGQAYANNVGWRLDYHLATPAL 238

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
            +L  S +I        K SDH P+ V  D
Sbjct: 239 GALARSEQIYKTI----KFSDHAPITVDYD 264


>gi|23097966|ref|NP_691432.1| exodeoxyribonuclease [Oceanobacillus iheyensis HTE831]
 gi|22776190|dbj|BAC12467.1| exodeoxyribonuclease [Oceanobacillus iheyensis HTE831]
          Length = 269

 Score =  167 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 62/261 (23%), Positives = 117/261 (44%), Gaps = 13/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN IRA +      + +E   D  C+QE+K ++     + L     +     +
Sbjct: 1   MHFISWNVNGIRACVRKGFLDFFQEMGADFFCIQESKLQEGQIQLD-LDGYYQYWNYAER 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K++P+ +   +  ++ + + R I   +     +  + N+Y P+     + 
Sbjct: 60  KGYSGTAIFTKWEPLHVFYGIDSNNYEPEGRIITLEYE----SFYLVNVYTPNSKRDLTR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
             D         L    Q+L  ++PL++ GD N+     D  N      ++ FT E R  
Sbjct: 116 LEDRLEWE--DRLFDYLQKLNKKKPLVYCGDLNVAHHEIDLRNDKTNHGNSGFTKEERSK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             +L + GF D +R  H     ++++W Y      +N G RID+ ++S +    L  + +
Sbjct: 174 MSRLLDAGFVDTLRHFHPEADDIFTWWSYMKTIRERNIGWRIDYFIVSEQLIPALKKSEV 233

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            +   G    SDH P+ + +D
Sbjct: 234 HSSVLG----SDHCPIGLVID 250


>gi|319956878|ref|YP_004168141.1| exodeoxyribonuclease iii [Nitratifractor salsuginis DSM 16511]
 gi|319419282|gb|ADV46392.1| exodeoxyribonuclease III [Nitratifractor salsuginis DSM 16511]
          Length = 258

 Score =  167 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 64/260 (24%), Positives = 99/260 (38%), Gaps = 14/260 (5%)

Query: 6   VATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ--SLNYHIETCGQ 62
             +WNVN IR+        W+ +  P I+ LQE K E+  FP +  +    + ++ +  +
Sbjct: 7   FVSWNVNGIRSVAKKGALKWVDKEPPHILGLQEVKAEEDQFPEDLFEHRYAHRYVSSSHK 66

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K  +GVA+ +  +P         D L            I    +   N            
Sbjct: 67  KGQSGVALFTDLEPEYYSPCYEVDILKEGRINEIHFDKIAFFNVYFPN------GKRNEE 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +   K+ +  RF        +    +IF GD N   +P D   P   E  + F    R  
Sbjct: 121 RLAYKLEFYDRFFEHIEGLRKKGMSIIFCGDVNTAHRPIDLARPKENEGISGFLPVERAW 180

Query: 183 FQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             KL   G+ D  R  H D    YS+W     +  +N G RID+  +S +    +  A I
Sbjct: 181 IDKLIEHGYIDTFRYIHGDEPERYSWWSMRTKARERNVGWRIDYFFVSKDLKERILDADI 240

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
             +  G    SDH PV + L
Sbjct: 241 LAEIEG----SDHAPVSLRL 256


>gi|313794091|gb|EFS42113.1| exodeoxyribonuclease III [Propionibacterium acnes HL110PA1]
 gi|315077107|gb|EFT49182.1| exodeoxyribonuclease III [Propionibacterium acnes HL053PA2]
 gi|327451399|gb|EGE98053.1| exodeoxyribonuclease III [Propionibacterium acnes HL092PA1]
          Length = 297

 Score =  167 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 61/297 (20%), Positives = 105/297 (35%), Gaps = 37/297 (12%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + +A++N+N IRA +    +  ++  + D+I LQE +    + P       +        
Sbjct: 1   MRIASFNINGIRAVLKRGFSERMEARDCDVIGLQEVRCRPADLPEGAFGDRHVSWAPGSL 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDL------------------------DVQARFIEAT 98
              NGVA+L++  P E+ +      +                                  
Sbjct: 61  AGRNGVALLTRTAPAEVRSWGTHLVMAPGQAPTPAQALTGNTDGLPTELLPFADEGRYIE 120

Query: 99  FTINTQTLRIGNLYLPHGNPITS----------TKYDDKISWIKRFLRFASQRLELEEPL 148
             +    L +  LYLP G                K      +    +R   +        
Sbjct: 121 VDLADTPLTVACLYLPKGATPDPANEKTIAKQDRKMAFLTGFRDHLVRRRQECTTQGRHF 180

Query: 149 IFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL--QNMGFTDAIRATHDTHHLYS 206
           +  GD+NI  +  D  N    + +  F  E RQ F  +   +           DT+  YS
Sbjct: 181 LVMGDFNIAHENADLKNWKANQRNEGFLPEERQWFDTILSPDTLIDVVRAQHPDTNGPYS 240

Query: 207 FWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +W +   ++  + G RID+ + SPE  S   +A ID  P    + SDH  V+V  D+
Sbjct: 241 WWSWRGKAFVNDAGWRIDYHLASPELASKAITAEIDRDPSYSERTSDHAAVVVDYDL 297


>gi|32491120|ref|NP_871374.1| exonuclease III [Wigglesworthia glossinidia endosymbiont of
           Glossina brevipalpis]
 gi|25166327|dbj|BAC24517.1| xthA [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 267

 Score =  167 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 71/266 (26%), Positives = 123/266 (46%), Gaps = 7/266 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++NVN IR+    +   I++ NP+II LQETK  +++FP +      Y     GQK
Sbjct: 1   MKFVSFNVNGIRSHYDQVLLIIEKINPEIISLQETKVINESFPEKIFLQHGYKSYVHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS-T 122
            ++GVA L++     I T    +  + + R I +        + I N+Y P+G    +  
Sbjct: 61  QHHGVAFLTRLNMKNIFTGFKNNFFNERYRVISSYIKTKIGNVYIINIYSPNGESKKNLK 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC------YNPIIWENDACFT 176
           K++ K  + K    F ++  E    ++  GD NI P+  D       Y   +      F 
Sbjct: 121 KFEIKKIFYKSLFLFLNKFYEKNMHILIMGDMNISPEDLDVGLSLTSYKRWLSIGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
            E R+  +K+   GF D  R  +     +S++DY ++ + KN G+RID  + +    S +
Sbjct: 181 PEEREWIKKIFKWGFVDVFRFLNPDKKKFSWFDYRSEGYIKNVGLRIDLFLSTFSLLSYI 240

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLD 262
             + +    R   K SDH P+ + L+
Sbjct: 241 EESGMIYSIRSMDKTSDHVPIWIKLN 266


>gi|119358281|ref|YP_912925.1| exodeoxyribonuclease III Xth [Chlorobium phaeobacteroides DSM 266]
 gi|119355630|gb|ABL66501.1| exodeoxyribonuclease III Xth [Chlorobium phaeobacteroides DSM 266]
          Length = 256

 Score =  167 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 62/259 (23%), Positives = 103/259 (39%), Gaps = 8/259 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A+WNVN IRAR   L +WI  N+PD++ LQE K +  + P    +   Y     G  
Sbjct: 1   MKIASWNVNGIRARQEALVSWIGRNSPDVLVLQEVKADLADIPASISELEGYDSFWNGSS 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
              G +           +     ++     F   T  ++T    +   Y+P G       
Sbjct: 61  FRKGYSGTGMLVRKGAFSGTVEWEIPAF-DFENRTCVLHTGQFTLTGCYVPRGE--GDEH 117

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ + ++   F    L     ++F GD N+  +  D +             E R S 
Sbjct: 118 YRLKLRYFEQTRLFIENLLLEGRQIVFTGDMNVAHRDIDVHRSQNKPGAVGLRAEERSSI 177

Query: 184 QKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
                +G  D +R      + L+++W Y+ ++  +N G RID   LS      +    +D
Sbjct: 178 DACLALGLRDVMRERAPERNDLFTWWPYWKNARERNLGWRIDCFFLSAAIAERVTMVAVD 237

Query: 243 TKPRGWTKPSDHTPVIVSL 261
              R     SDH P+I+ L
Sbjct: 238 RDERS----SDHAPIILEL 252


>gi|307212268|gb|EFN88076.1| Recombination repair protein 1 [Harpegnathos saltator]
          Length = 327

 Score =  167 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 73/259 (28%), Positives = 115/259 (44%), Gaps = 13/259 (5%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFET-LQSLNYHIETCG 61
           + + TWNV+ IRA I  N   +I + + DII LQETK      P E  L   +++     
Sbjct: 75  LKICTWNVSGIRAVIKKNGLDYIAKEDADIIALQETKCGKDKMPDEIKLSGYHHYFLDSK 134

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           Q  Y GVA+  K +P+ +   L   + D + R I A F    +   +       G  + +
Sbjct: 135 QSGYCGVALFCKEKPVSVKYGLNNSNFDSEGRIIAAEFP---EFFMVNVYVPNAGQKLVT 191

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
                K     +  +   + L+ ++P+I  GD N+  Q  D  NP     +A FT E R 
Sbjct: 192 LP---KRLEWNKIFKKYIEELDQKKPVIICGDMNVAHQEIDLKNPKTNTKNAGFTKEERD 248

Query: 182 SFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
                   GF D  R  +      Y+FW Y+A++ +K+ G R+D+ + S    + +    
Sbjct: 249 GMTDFLAAGFIDTFRLLYPDKEGAYTFWSYFANARNKDIGWRLDYFLASERIKNKICDNI 308

Query: 241 IDTKPRGWTKPSDHTPVIV 259
           I  +  G    SDH PVI+
Sbjct: 309 IRKQVYG----SDHCPVIL 323


>gi|157825475|ref|YP_001493195.1| exodeoxyribonuclease III [Rickettsia akari str. Hartford]
 gi|157799433|gb|ABV74687.1| exodeoxyribonuclease III [Rickettsia akari str. Hartford]
          Length = 277

 Score =  167 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 78/264 (29%), Positives = 125/264 (47%), Gaps = 7/264 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62
           + + TWN+NS+R RI  L   + E+ PDII LQETK  D  FP E ++++ Y H+   GQ
Sbjct: 1   MKIVTWNINSLRLRIDLLRKLVYEHQPDIILLQETKVSDSLFPLEVIKNIGYEHVIYSGQ 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           KSYNGVAI+SK+    + +    +        I     I+   +          +   + 
Sbjct: 61  KSYNGVAIISKFPLNNVFSLELYNSDKRHIAAIVNDIEIHNFYV---PAGGDIPDIDANL 117

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF-TLEVRQ 181
           K+  K+ +++    + +      + +I  GD NI P  HD ++     N      +E   
Sbjct: 118 KFKHKLEYVRLMQEWLTTNRTRNDKIIIVGDLNIAPHEHDVWSSKQLRNVISHTDIERSL 177

Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLLHSA 239
             +   ++ F D+ R         Y++W Y    W K N+G R+DHI +S      L S 
Sbjct: 178 LVELQNSLSFIDSSRYFVPLDEKFYTWWSYRNIDWKKSNRGRRLDHIWVSNNLKDALFSM 237

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
            + ++ R W +PSDH P  V+LD+
Sbjct: 238 HLLSEARDWLQPSDHVPYFVTLDV 261


>gi|285017195|ref|YP_003374906.1| exodeoxyribonuclease III protein [Xanthomonas albilineans GPE PC73]
 gi|283472413|emb|CBA14918.1| probable exodeoxyribonuclease III protein [Xanthomonas albilineans]
          Length = 266

 Score =  167 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 65/273 (23%), Positives = 105/273 (38%), Gaps = 24/273 (8%)

Query: 4   VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + ++N N +R A       W      D++C+QETK +             Y +     
Sbjct: 1   MRIVSFNANGLRSAATKGFFEWFAGQQTDVLCVQETKAQAPQLAGPAFLPEGYRVWFRDA 60

Query: 62  --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GVAI SK +P E+ T L   + D + R++E  F      L + + Y+P G+  
Sbjct: 61  STKKGYSGVAIYSKREPDEVRTALGWPEFDEEGRYLEVRFG----QLSVVSFYIPSGS-S 115

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +   K   +        Q L      +  GD+NI+    D  N    + ++      
Sbjct: 116 GEVRQGYKFQVMDWLRPILVQWLHNGRDYVLCGDWNIVRSALDIKNWKSNQKNSGCLPAE 175

Query: 180 RQSFQKLQNMG-----------FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
           R     L               + DA RA H     Y++W     + + + G RID+  +
Sbjct: 176 RDWLNGLCADRAEDADAASGRGWVDAYRALHPDGQDYTWWSNRGAARANDVGWRIDYQFV 235

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           +P     LH   I T+ R     SDH P  V  
Sbjct: 236 TPSLRERLHGCAIYTEQR----FSDHAPFTVDY 264


>gi|254439233|ref|ZP_05052727.1| exodeoxyribonuclease III (xth) subfamily [Octadecabacter
           antarcticus 307]
 gi|198254679|gb|EDY78993.1| exodeoxyribonuclease III (xth) subfamily [Octadecabacter
           antarcticus 307]
          Length = 262

 Score =  167 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 84/268 (31%), Positives = 121/268 (45%), Gaps = 11/268 (4%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIET 59
           MS  T+ATWN+NS+R R   +A  + E  PD++CLQE K+     P E  Q+L Y H+  
Sbjct: 1   MS-FTLATWNINSVRLREGLVARLMTEEAPDVLCLQECKSPVDLIPLEQFQALGYHHMVA 59

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            GQK YNGVAI SK    E+           +    +         + + N Y+P G   
Sbjct: 60  RGQKGYNGVAIFSKMAIEEVAAEDFVSLGHARHIAGKLENG-----VTVHNFYVPAGGDK 114

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACF-T 176
            + + ++K      +L           P      GD NI P+  D ++           T
Sbjct: 115 PNREINEKFGQKLDYLTEMRDYFRANAPEKSILVGDLNIAPREDDVWDHKKLLKVVSHTT 174

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSL 235
           +EV           + D  RA     +LYS+W Y A  W   +KG R+DHI  +P+  + 
Sbjct: 175 VEVEHLADVQGAGDWVDVTRADIPDGNLYSWWSYRAPDWDTADKGRRLDHIWATPDIANS 234

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            HS+R+    RGW +PSDH PV    D+
Sbjct: 235 AHSSRVIRAVRGWEQPSDHAPVFAMFDL 262


>gi|86136925|ref|ZP_01055503.1| exodeoxyribonuclease III, putative [Roseobacter sp. MED193]
 gi|85826249|gb|EAQ46446.1| exodeoxyribonuclease III, putative [Roseobacter sp. MED193]
          Length = 262

 Score =  167 bits (422), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 80/264 (30%), Positives = 116/264 (43%), Gaps = 10/264 (3%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQK 63
           T+ATWN+NS+R R   +   ++E  PD++CLQE K+     P E    L Y ++   GQK
Sbjct: 4   TLATWNINSVRLREGLVQKLMREEGPDVLCLQECKSPVDLIPTEGFAKLGYPYMVARGQK 63

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            YNGVAILS+           G +                  + + N Y+P G      +
Sbjct: 64  GYNGVAILSRLPIA-----EAGAEDFAGLGHARHIAGRLENGVTVHNFYVPAGGDKPDRE 118

Query: 124 YDDKISWIKRFLRFASQRLE--LEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180
            ++K      +L       +    E  I  GD NI P+  D ++          T  EV 
Sbjct: 119 VNEKFGQKLDYLTEMRDWFKAAAPEKSILVGDLNIAPREDDVWDHKKMLKIVSHTPVEVD 178

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHSA 239
              +     G+ D  RA      LYS+W Y A  W   +KG R+DH+  + +     HS+
Sbjct: 179 LLAEVQDAGGWADVTRADIPEGLLYSWWSYRAKDWDAADKGRRLDHVWATEDICQAAHSS 238

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
           R+    RGW KPSDH PV  + D+
Sbjct: 239 RVLRAARGWEKPSDHAPVFATFDL 262


>gi|226365708|ref|YP_002783491.1| exodeoxyribonuclease [Rhodococcus opacus B4]
 gi|226244198|dbj|BAH54546.1| exodeoxyribonuclease [Rhodococcus opacus B4]
          Length = 268

 Score =  166 bits (421), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 66/267 (24%), Positives = 108/267 (40%), Gaps = 15/267 (5%)

Query: 6   VATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL--NYHIETCGQ 62
           + T NVN +RA     L  W++    D++CLQET+  D+        +L   +++ +   
Sbjct: 5   ITTVNVNGVRAAARKGLTEWMERTEADVVCLQETRASDEQLAETLAPALEGGWNLASAEP 64

Query: 63  KS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            S   NGVAILS+     +      ++     R+IEA F      L + +LYLP G   T
Sbjct: 65  SSKGRNGVAILSRKPADAVRVGHGDEEFAAAGRYIEADFD----DLTVASLYLPSGEAQT 120

Query: 121 STKYD---DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
             + +      S+ +     A   +     ++  GD+NI     D  N    + ++ F  
Sbjct: 121 PRQEEKERFMDSFARYLTVTAEAAVAAGRHVVVCGDWNIAHTELDLKNWKTNKKNSGFLP 180

Query: 178 EVRQSFQKLQNMGFTDA---IRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             R+    L   G   A        D    YS+W Y   ++  + G RID+ + + E   
Sbjct: 181 HEREWMSALFAEGAHWADVVRLLEPDVAGPYSWWSYRGKAFDNDSGWRIDYQIATRELAE 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261
               A ++       + SDH PV V  
Sbjct: 241 RAKQAVVERAETYDQRWSDHAPVTVQY 267


>gi|319406308|emb|CBI79945.1| exodeoxyribonuclease III [Bartonella sp. AR 15-3]
          Length = 272

 Score =  166 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 76/267 (28%), Positives = 119/267 (44%), Gaps = 9/267 (3%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCG 61
           +  +ATWN+NSIR R+  +  ++   + D++CLQE K  D  FP +  ++  Y HI   G
Sbjct: 2   LFRIATWNINSIRLRLSQVLQYLDIFSVDMLCLQEIKCPDDLFPRQFFEAAGYQHIALSG 61

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           QKSY+GVAI+S+   + I         D +   +     ++ + +RI N Y+P G     
Sbjct: 62  QKSYHGVAIISRLPFVSIERRFFCQKEDCRHLSVIIE--LHGRRIRIHNFYVPAGGDEPD 119

Query: 122 TKYDDKISWIKRF---LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL- 177
              ++K  +   F   +             +  GD NI P P D ++          T  
Sbjct: 120 VNKNEKFRYKLDFLEEMSSIRSDQGDGLASLLLGDLNIAPLPEDVWSHKQLLKVVSHTPI 179

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSL 235
           E  +        G+ D +R        LY++W Y A  W+  ++G R+DHI  SP     
Sbjct: 180 ETERLQALCCEGGWVDLMRMKFPIPTKLYTWWSYRARDWALADRGRRLDHIWSSPNLVPF 239

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262
           +    I  + RGW + SDH PV    D
Sbjct: 240 VKELAIFREARGWPQASDHVPVQTLFD 266


>gi|71901538|ref|ZP_00683622.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Xylella
           fastidiosa Ann-1]
 gi|71728693|gb|EAO30840.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Xylella
           fastidiosa Ann-1]
          Length = 266

 Score =  166 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 44/270 (16%), Positives = 83/270 (30%), Gaps = 18/270 (6%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + ++++N N +R+ +      W    + D++C+QETK +           + YH+     
Sbjct: 1   MRISSFNANGLRSALSKGFFDWFSTQDIDVLCVQETKAQRHQLVGPDFFPVGYHVCFRDA 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
               G + ++ Y   E                             +   +          
Sbjct: 61  TIKKGYSGVAIYSRCEPDELRTTLGWTEFDEEGRYVEARFGNLSVV--SFYIPSGSSGEK 118

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           + + K   ++       + L      +  GD+NI+    D  N    + ++      R  
Sbjct: 119 RQNYKFEVMRWLRPILCEWLLSGRDYVLCGDWNIVRSALDIRNWKSNQKNSGCLPLERDW 178

Query: 183 FQKLQNMG-----------FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
              L               + D  R  H     Y++W     +   N G RID+  +SP 
Sbjct: 179 LNGLCADSLHDVNSAQGRGWVDTYRVLHPQGEDYTWWSNRGAARINNVGWRIDYQFVSPG 238

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
               +    I  + R     SDH P  V  
Sbjct: 239 LRERVSRCAIYCEQR----FSDHAPYTVEY 264


>gi|300934594|ref|ZP_07149850.1| exodeoxyribonuclease III [Corynebacterium resistens DSM 45100]
          Length = 270

 Score =  166 bits (421), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 73/278 (26%), Positives = 114/278 (41%), Gaps = 26/278 (9%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+NS+R R   +  ++  ++ D++CLQETK  D+ FP        Y     G  
Sbjct: 1   MRIATWNINSVRIREERVREFLTRSDVDVLCLQETKCTDQQFP--DFTDTGYEQAHFGLH 58

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLD----VQARFIEATFTINTQTLRIGNLYLPHGNPI 119
           S+NGVAILS+     + T+      D     +          N   + + +LY+P+G  I
Sbjct: 59  SFNGVAILSRVGLSSVKTNFGQPGFDKDLTQKQNLEARAIGANCGGVEVWSLYVPNGREI 118

Query: 120 TSTKYDDKISWIKRFLRF--------------ASQRLELEEPLIFAGDYNIIPQPHDCYN 165
               Y  K+ W+     +                      + L   GD+NI P+  D ++
Sbjct: 119 HDPHYTYKLRWLHALADYAGGRTTKAISADTADEAIEPASDRLCLVGDFNIAPRDEDVWD 178

Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225
              +      T   R     L+  G   A          Y++WDY A  + K +G+RID 
Sbjct: 179 RSHFNGKTHVTPNERDCLAALEEAGLMQATALI---QDEYTYWDYQAMRFPKGEGMRIDL 235

Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                  T    +AR+D   R     SDH PVIV  ++
Sbjct: 236 QYA-RGIT--ATAARVDRDERKGKGASDHAPVIVDYEV 270


>gi|326774141|ref|ZP_08233423.1| exodeoxyribonuclease III [Actinomyces viscosus C505]
 gi|326636280|gb|EGE37184.1| exodeoxyribonuclease III [Actinomyces viscosus C505]
          Length = 277

 Score =  166 bits (420), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 54/277 (19%), Positives = 88/277 (31%), Gaps = 20/277 (7%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + +AT NVN IRA     +  W+  + PDI+ LQE +  D+    + L      I  C  
Sbjct: 1   MRIATVNVNGIRAAARKGMGEWLAASAPDILLLQEVRA-DEQIAVDLLPGYEAAIWPCRI 59

Query: 63  KSYNGV---------------AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107
           K   GV                        E      G  L+                + 
Sbjct: 60  KGRAGVGVAVREGGPATFGELRYGVAAPGTEEPDVDSGRWLEADLSLTGFDGIERLTVIS 119

Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167
                   G      KY        R     +   +    ++ AGD N++    D  N  
Sbjct: 120 AYLHSGQLGTEKMDQKYAHLELVDARMAELLAAARDGGPQVVMAGDLNVVRSERDIKNWK 179

Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRAT---HDTHHLYSFWDYYADSWSKNKGIRID 224
              N     ++   +  +                 +    Y++W     ++  N G RID
Sbjct: 180 PNHNKIAGVMDEEIAHLEGWFASGWVDASRHLVGDEEQGPYTWWSQRGKAFDNNAGWRID 239

Query: 225 HIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           + +L+P      HS  +D  P   ++ SDH P++V  
Sbjct: 240 YQVLTPALAERAHSVTVDRAPDYASRWSDHAPLVVEY 276


>gi|320532068|ref|ZP_08032952.1| putative exodeoxyribonuclease III [Actinomyces sp. oral taxon 171
           str. F0337]
 gi|320135713|gb|EFW27777.1| putative exodeoxyribonuclease III [Actinomyces sp. oral taxon 171
           str. F0337]
          Length = 277

 Score =  166 bits (420), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 53/277 (19%), Positives = 87/277 (31%), Gaps = 20/277 (7%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + +AT NVN IRA     +  W+  + PDI+ LQE +  D+    + L      I  C  
Sbjct: 1   MRIATVNVNGIRAAARKGMGEWLTASAPDILLLQEVRA-DEQIAVDLLPGYEAAIWPCRI 59

Query: 63  KSYNGV---------------AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107
           K   GV                        E      G  L+                + 
Sbjct: 60  KGRAGVGVAVRDGGPATLGELRYGVAAPGTEEPDVDSGRWLEADLSLTGFDGVEQLTVIS 119

Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167
                   G      KY        R     +   +    ++ AGD N++    D  N  
Sbjct: 120 AYLHSGQLGTEKMDQKYAHLELVDARMADLLAAARDGGPQVLMAGDLNVVRSERDIKNWK 179

Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRAT---HDTHHLYSFWDYYADSWSKNKGIRID 224
              N     ++   +  +                 +    Y++W     ++  N G RID
Sbjct: 180 PNHNKIAGVMDEEIAHLEGWFASGWVDASRHLVGDEEQGPYTWWSQRGKAFDNNAGWRID 239

Query: 225 HIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           + +L+P       S  +D  P   ++ SDH P++V  
Sbjct: 240 YQVLTPALAERARSVTVDRAPDYASRWSDHAPLVVEY 276


>gi|189499147|ref|YP_001958617.1| exodeoxyribonuclease III Xth [Chlorobium phaeobacteroides BS1]
 gi|189494588|gb|ACE03136.1| exodeoxyribonuclease III Xth [Chlorobium phaeobacteroides BS1]
          Length = 256

 Score =  166 bits (420), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 60/259 (23%), Positives = 105/259 (40%), Gaps = 9/259 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A+WN+N IRAR  +L  WI    PDI+ L+E K ++K+ P E +    Y     G  
Sbjct: 1   MRIASWNINGIRARRDSLLGWIDRKKPDILVLEELKAQEKDIPEEIVAMQGYKKYWNGSA 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
              G + +       +      +  +        T  ++   L +   Y+P G+      
Sbjct: 61  FRKGYSGVGLLLKEGLCGECRLEIPEF--DCENRTVVLHGSNLSVIGTYVPRGD--GDAH 116

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ ++     +  + L     +I  GD N+     D ++            E R + 
Sbjct: 117 YAVKLGYLSDLGTYILELLREGRQVIHTGDINVAHTDLDVHHSQNKPGIVGLRPEERAAI 176

Query: 184 QKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
            +   +G  D +R        ++++W Y+  +  +N G RID   LS      +   RID
Sbjct: 177 DRHLEIGLHDIMRERFPDKKDMFTWWPYWKGARERNLGWRIDCFYLSKGLIGDVVDVRID 236

Query: 243 TKPRGWTKPSDHTPVIVSL 261
           +      K SDH PVI+ +
Sbjct: 237 SA----EKSSDHAPVILDI 251


>gi|163839057|ref|YP_001623462.1| exodeoxyribonuclease III [Renibacterium salmoninarum ATCC 33209]
 gi|162952533|gb|ABY22048.1| exodeoxyribonuclease III [Renibacterium salmoninarum ATCC 33209]
          Length = 288

 Score =  166 bits (420), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 64/272 (23%), Positives = 102/272 (37%), Gaps = 12/272 (4%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           V +A+ NVN IRA     +A W+   + DI+CLQE +  D        Q  +        
Sbjct: 16  VRIASVNVNGIRASYRKGMADWLAARDVDILCLQEVRAPDDVVEGFLAQDWHLLHAEAAD 75

Query: 63  KSYNGVAILSKYQ---PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
           K   GV I S+     PI   T +  D      R++EA + ++            H   +
Sbjct: 76  KGRAGVLIASRKDSLEPIATRTGIGDDYFATTGRWVEADYKLSGGKQLTVVSAYVHSGEV 135

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
            + K DDK  ++   L    +     +  +  GD N+     D  N      +A F  E 
Sbjct: 136 NTPKQDDKYRFLDVMLTRMPELAAHSDYALIVGDLNVGHTTLDIKNWKGNVKNAGFLPEE 195

Query: 180 RQSFQKLQN--------MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
           R  F +  +                        Y++W     ++  N G RID+ M +PE
Sbjct: 196 RAYFDRFFSANDLKDGLGWKDVQREVAGQVEGPYTWWSQRGQAFDNNTGWRIDYQMATPE 255

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             +      +D      T+ SDH P++V  +I
Sbjct: 256 LFAAAGDVVVDRAASYDTRRSDHAPLVVDYNI 287


>gi|309811929|ref|ZP_07705701.1| putative exodeoxyribonuclease III [Dermacoccus sp. Ellin185]
 gi|308434141|gb|EFP58001.1| putative exodeoxyribonuclease III [Dermacoccus sp. Ellin185]
          Length = 269

 Score =  166 bits (419), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 54/264 (20%), Positives = 96/264 (36%), Gaps = 7/264 (2%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFP--FETLQSLNYHIETC 60
           + V T NVN IRA        W+ +  PD++ +QE +   K F    +      Y +   
Sbjct: 1   MRVITANVNGIRAAQRRGGLEWLAQQEPDVVAMQEVRASAKQFATALDGSALAEYELAHA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
              +     +    +     +    D  D   R++EA   ++ +++ I ++Y+  G   T
Sbjct: 61  ESAAAGREGVAILTKHALASSSSVIDGFDEIGRWVEADVVVDGRSVTIASVYVHTGEAGT 120

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF-TLEV 179
                    +       A     ++ P +  GD+N+    +D  N       A F   E 
Sbjct: 121 DK---QTAKYAFLDALEARMAQLVDRPALVMGDFNVAHTANDLKNWKGNRGKAGFLEDEQ 177

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
               +  QN           D    YS+W +   ++  + G RID+   SP   ++    
Sbjct: 178 AYLTRLTQNGWVDVVRANHGDVPGPYSWWSWRGKAFDNDSGWRIDYQFASPALAAVAREP 237

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
            I        + SDH  V+V  D+
Sbjct: 238 WIGRAAAYDQRWSDHAAVVVDYDL 261


>gi|34499702|ref|NP_903917.1| exodeoxyribonuclease III [Chromobacterium violaceum ATCC 12472]
 gi|34105553|gb|AAQ61907.1| exodeoxyribonuclease III [Chromobacterium violaceum ATCC 12472]
          Length = 258

 Score =  166 bits (419), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 61/263 (23%), Positives = 110/263 (41%), Gaps = 13/263 (4%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59
           ++ + + N+N IR+        W+   + D +C+QE K +  +             +   
Sbjct: 1   MLRIVSANLNGIRSADKKGFFDWLAGIDADFVCVQELKAQAGDLSERMRNPDGLAGYFHY 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GV + +++QP  +V  L  D +D + RF++  F      L + +LYLP G+  
Sbjct: 61  AEKKGYSGVGLYTRHQPDAVVEGLGVDWIDAEGRFLQLDFG----KLSVVSLYLPSGSSS 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +          F+    +       ++  GD+NI     D  N      ++ F  E 
Sbjct: 117 DERQQVKFDFLDV-FMPHLEKLRAEGRDIVICGDWNIAHNEIDLKNWKGNLKNSGFLPEE 175

Query: 180 RQSFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R     L    G+ D  R  +     Y++W     +++K+ G RID+ +++P    L  S
Sbjct: 176 RAWMTDLLGRVGWRDVWRNLYPEAPGYTWWSNRGQAYAKDVGWRIDYQIVTPSLMELAES 235

Query: 239 ARIDTKPRGWTKPSDHTPVIVSL 261
           A +        K SDH P+IV  
Sbjct: 236 ASVYKD----EKFSDHAPLIVDY 254


>gi|111023203|ref|YP_706175.1| DNA-(apurinic or apyrimidinic site) lyase [Rhodococcus jostii RHA1]
 gi|110822733|gb|ABG98017.1| probable DNA-(apurinic or apyrimidinic site) lyase [Rhodococcus
           jostii RHA1]
          Length = 268

 Score =  166 bits (419), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 65/267 (24%), Positives = 107/267 (40%), Gaps = 15/267 (5%)

Query: 6   VATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL--NYHIETCGQ 62
           + T NVN +RA     L  WI+    D++CLQET+  D+        +L   +++ +   
Sbjct: 5   ITTVNVNGVRAAARKGLTEWIERTEADVVCLQETRASDEQLAETLAPALEGGWNLVSAEP 64

Query: 63  KS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            S   NGVAILS+            D+     R++EA F      L + +LYLP G   T
Sbjct: 65  SSKGRNGVAILSRKPADAFRVGHGDDEFATAGRYLEADFD----DLTVASLYLPSGEAQT 120

Query: 121 STKYD---DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
             + +      S+ +     A+  +     ++  GD+NI     D  N    + ++ F  
Sbjct: 121 PRQEEKERFMDSFARYLTATAAAAVAAGRHVVVCGDWNIAHTELDLKNWKTNKKNSGFLP 180

Query: 178 EVRQSFQKLQNMGFTDA---IRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             R+    L            +   D    YS+W Y   ++  + G RID+ + + E   
Sbjct: 181 NEREWLGALFAEDAHWTDVVRQLNPDVAGPYSWWSYRGKAFDNDSGWRIDYQIATRELAE 240

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261
               A ++       + SDH PV V  
Sbjct: 241 RAKQAVVERAETYDQRWSDHAPVTVQY 267


>gi|120402563|ref|YP_952392.1| exodeoxyribonuclease III Xth [Mycobacterium vanbaalenii PYR-1]
 gi|119955381|gb|ABM12386.1| exodeoxyribonuclease III Xth [Mycobacterium vanbaalenii PYR-1]
          Length = 270

 Score =  166 bits (419), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 66/273 (24%), Positives = 118/273 (43%), Gaps = 19/273 (6%)

Query: 4   VTVATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKNF--PFETLQSLN 54
           + + T NVN IRA +         L AW KE   D++CLQET+ +D+        + +  
Sbjct: 1   MILTTINVNGIRAAVKQRSVENLGLLAWFKETASDVVCLQETRADDEQLGEALAPVLADG 60

Query: 55  YHIET--CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           +H+ +     K  NGVA+LS+    ++      ++     R+IE         + +G++Y
Sbjct: 61  WHLASAAPHVKGRNGVAVLSRSPFDDVRIGCGAEEFAAHGRYIEVDTAG----VTVGSVY 116

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFA---SQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
           +P G   T  + + +        R A   ++ +E     + +GD+NI    +D  N    
Sbjct: 117 VPTGEAETDRQLEKERFMAAVAARMAVLLARSVEDGRHAVLSGDWNIAHTENDIKNWKGN 176

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIML 228
              A F  + RQ   +L   G+ D +R  H      Y++W +   ++  + G RID+ + 
Sbjct: 177 VKKAGFLPQERQWLTELLGTGWVDVVRQAHPDVAGPYAWWSWRGKAFDNDAGWRIDYQLA 236

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           +P     + +   +       + SDH PV V  
Sbjct: 237 TPGLAGRVAAVTTERPAAYALRWSDHCPVTVHY 269


>gi|307721179|ref|YP_003892319.1| exodeoxyribonuclease III [Sulfurimonas autotrophica DSM 16294]
 gi|306979272|gb|ADN09307.1| exodeoxyribonuclease III [Sulfurimonas autotrophica DSM 16294]
          Length = 258

 Score =  165 bits (418), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 61/260 (23%), Positives = 93/260 (35%), Gaps = 10/260 (3%)

Query: 6   VATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64
           + +WNVN IRA        WI E +  I+CLQE K + +  P    +     +     + 
Sbjct: 7   IISWNVNGIRAVANKEALKWIDERDTGILCLQEIKAQKEQIPDNLFEKEFSEVIINSGER 66

Query: 65  YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124
                  +        T    D        I  T   +     +              + 
Sbjct: 67  KGYSGTATYSMLKSDYTSTCNDIDTKHEGRIIETHYGDIVLFNVY----FPNGQKDEERL 122

Query: 125 DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ 184
             K+ +   FL +  Q  +  + +I  GD N   +  D  NP      + F    R+   
Sbjct: 123 AYKMKFYDDFLAYCEQLKDEGKSIIVCGDVNTAHREIDLKNPKANSKTSGFLPIEREWID 182

Query: 185 KLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           K  N G+ D  R  H D    YS+W Y  ++  KN G RID+  +S +    L  A I  
Sbjct: 183 KFLNHGYIDTFRYVHGDKEDAYSWWSYRFNARVKNVGWRIDYFFISEDLAENLEDAFILD 242

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
              G    SDH P+ + + I
Sbjct: 243 YIEG----SDHCPIGIRITI 258


>gi|221369426|ref|YP_002520522.1| Exodeoxyribonuclease III [Rhodobacter sphaeroides KD131]
 gi|221162478|gb|ACM03449.1| Exodeoxyribonuclease III [Rhodobacter sphaeroides KD131]
          Length = 255

 Score =  165 bits (418), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 94/258 (36%), Positives = 142/258 (55%), Gaps = 4/258 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+NVN +  R+  L  W++E  PD+ CLQE K     FP   L++  Y     GQK
Sbjct: 1   MRIATFNVNGVNGRLPVLLRWLEEVRPDVACLQELKAASARFPAAALEAAGYGAVWHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           S+NGVAIL++               D ++R+IEA        + +G LY+P+GNP    K
Sbjct: 61  SWNGVAILARGAEPVRTRQDLPGVQDGESRYIEAAVQG----VLVGCLYMPNGNPAPGPK 116

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +  K++W    L  A + L  + P++ AGD+N++P   D + P  W  DA F  E R +F
Sbjct: 117 FAAKLAWFDHLLNHAEELLRHDVPVVLAGDFNVMPTDLDVHRPERWREDALFRPEARAAF 176

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            +L   G+TDA+R  H    +Y+FWDY  ++W ++ G+R+DH++LSP     L  A +D 
Sbjct: 177 ARLLTQGWTDAVRHLHPEDRIYTFWDYLRNAWERDAGLRLDHLLLSPSLLPRLKKAGVDR 236

Query: 244 KPRGWTKPSDHTPVIVSL 261
             RGW K SDH P  + +
Sbjct: 237 HVRGWEKASDHAPAWIEI 254


>gi|257069277|ref|YP_003155532.1| exodeoxyribonuclease III Xth [Brachybacterium faecium DSM 4810]
 gi|256560095|gb|ACU85942.1| exodeoxyribonuclease III Xth [Brachybacterium faecium DSM 4810]
          Length = 273

 Score =  165 bits (418), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 57/271 (21%), Positives = 99/271 (36%), Gaps = 12/271 (4%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
             T+AT NVN +RA     +  W+   + D+I LQE +  ++       +  +   E   
Sbjct: 2   TFTIATVNVNGLRAAARKGMGDWLAATSADVITLQEVRAPEELLAGLVGEGWSIAGEASQ 61

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA---------TFTINTQTLRIGNLY 112
            K   GVAI  +    ++        L                      + +TL + + Y
Sbjct: 62  LKGRAGVAIAVRSSREDVDLDAMRCGLPGVEGDSHTGRWIESDLADPFGDGRTLTVISCY 121

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
           +  GN        DK +++   +    Q       +   GD NI     D  N       
Sbjct: 122 MHSGNTEKPQTMTDKYAFLDAMMLRLEQLRAAGGHVALTGDINIAHTEWDIKNWKGNLKS 181

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRA--THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230
           A F  E R    +L        +      D    Y++W     ++  + G RID+ + + 
Sbjct: 182 AGFLPEERAYLDRLTTDAGFVDVHRALHGDGPGPYTWWSQRGKAFDNDAGWRIDYQLATE 241

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           +  +   SA++D  P   T+ SDH P+++S 
Sbjct: 242 DLAARATSAQVDRAPSYDTRWSDHAPLVISY 272


>gi|149521136|ref|XP_001516262.1| PREDICTED: similar to APEX nuclease (multifunctional DNA repair
           enzyme) 1 [Ornithorhynchus anatinus]
          Length = 324

 Score =  165 bits (418), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 68/269 (25%), Positives = 119/269 (44%), Gaps = 17/269 (6%)

Query: 2   SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQ----SLNYH 56
           + + + +WNV+ +RA +      W++E  PDI+CLQETK  +   P E          Y 
Sbjct: 66  ATLKICSWNVDGLRAWVKKKGLDWVREEAPDILCLQETKCAESKLPPELKDLSDFPHRYW 125

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                ++ Y+GV +LS+ +P+ +   +  ++ D + R I A F      + +       G
Sbjct: 126 AAPADKEGYSGVGLLSRRRPLSVSYGIGEEEHDQEGRVIVAEFEAF---VLVTVYVPNSG 182

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
             +    Y  +     R    A    +    L+  GD N+  +  D  NP   + +A FT
Sbjct: 183 RGLVRLDYRQRWDQAFRRFLQAQAARKP---LVLCGDLNVAHEEIDLRNPKGNKKNAGFT 239

Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E +   + L  +   D+ R  +    + Y+FW Y  ++ SKN G R+D+ +LS     
Sbjct: 240 PQERQGFGELLGTVDLADSFRHLYPAAAYAYTFWTYMMNARSKNVGWRLDYFLLSRALLP 299

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            L  ++I +   G    SDH P+ + L +
Sbjct: 300 SLCDSKIRSAALG----SDHCPITLYLAL 324


>gi|47213945|emb|CAF94476.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 320

 Score =  165 bits (418), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 75/261 (28%), Positives = 124/261 (47%), Gaps = 16/261 (6%)

Query: 5   TVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQ----SLNYHIET 59
            + +WNV+ +RA +      W++E NPD++CLQETK  +K+ P +          Y   +
Sbjct: 66  KITSWNVDGLRAWVKKKGLDWVREENPDVLCLQETKCAEKSLPADITSMPEYPYKYWAGS 125

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             ++ Y+GVA+L K +P+++   +  ++ D + R I A F        +       G  +
Sbjct: 126 DDKEGYSGVAMLCKTEPVKVTYGIGKEEHDKEGRVITAEFPGF---FLVTAYVPNSGRGL 182

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
               Y           R     L++++P++  GD N+  Q  D  NP   + +A FT E 
Sbjct: 183 VRLDYR---KTWDADFRTYLSELDVQKPVVLCGDLNVAHQEIDLKNPKGNKKNAGFTAEE 239

Query: 180 RQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R+ F +L   GF D+ R  +    H YSFW Y  ++  KN G R+D+ +LS      L  
Sbjct: 240 REGFGQLLEAGFVDSFRELYPEQSHAYSFWTYMMNARDKNVGWRLDYFVLSSSLLPGLCD 299

Query: 239 ARIDTKPRGWTKPSDHTPVIV 259
           ++I    R   K SDH P+ +
Sbjct: 300 SKI----RNQVKGSDHCPITL 316


>gi|28198064|ref|NP_778378.1| exodeoxyribonuclease [Xylella fastidiosa Temecula1]
 gi|182680692|ref|YP_001828852.1| exodeoxyribonuclease III Xth [Xylella fastidiosa M23]
 gi|28056124|gb|AAO28027.1| exodeoxyribonuclease [Xylella fastidiosa Temecula1]
 gi|182630802|gb|ACB91578.1| exodeoxyribonuclease III Xth [Xylella fastidiosa M23]
          Length = 266

 Score =  165 bits (418), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 43/270 (15%), Positives = 80/270 (29%), Gaps = 18/270 (6%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + ++++N N +R+ +      W    + D++C+QE K +             YH+     
Sbjct: 1   MRISSFNANGLRSALSKGFFDWFSTQDIDVLCVQEIKAQRHQLVGPDFFPAGYHVCFRDA 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
               G + ++ Y   E                             +   +          
Sbjct: 61  TIKKGYSGVAIYSRCEPDELRTTLGWAEFDEEGRYVEARFGNLSVV--SFYIPSGSSGEK 118

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +   K   ++       + L      +  GD+NI+    D  N    + ++      R  
Sbjct: 119 RQHYKFEVMRWLRPILCEWLLSGRDYVLCGDWNIVRSALDIRNWKSNQKNSGCLPLERDW 178

Query: 183 FQKLQNMG-----------FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
              L               + D  R  H     Y++W     +   N G RID+  +SP 
Sbjct: 179 LNGLCADSLHDVNSAQGRGWVDTYRVLHPQGEDYTWWSNRGAARVNNVGWRIDYQFVSPG 238

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
               +    I  + R     SDH P  V  
Sbjct: 239 LRERVSRCAIYCEQR----FSDHAPYTVEY 264


>gi|233305|gb|AAB19427.1| Rrp1=recombination repair protein 1 [Drosophila, Peptide, 253 aa]
          Length = 253

 Score =  165 bits (418), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 69/263 (26%), Positives = 115/263 (43%), Gaps = 13/263 (4%)

Query: 4   VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNV  +RA +       I    PDI CLQETK  +   P E  +   YH      
Sbjct: 1   LKICSWNVAGLRAWLKKDGLQLIDLEEPDIFCLQETKCANDQLPEEVTRIPGYHPYWLCM 60

Query: 63  KSYN-GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
                GVAI SK  PI +   +  ++ D   R I A +        + N+Y+P+      
Sbjct: 61  PGGYAGVAIYSKIMPIHVEYGIGNEEFDDVGRMITAEYE----KFYLINVYVPNSGRKLV 116

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
                     ++  +   ++L+  +P++  GD N+   P D  NP     +A FT E R 
Sbjct: 117 NLEPR--MRWEKLFQAYVKKLDALKPVVICGDMNVSHMPIDLENPKNNTKNAGFTQEERD 174

Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
              +L  +GF D  R  +      Y+FW Y A++ ++N G R+D+ ++S      +    
Sbjct: 175 KMTELLGLGFVDTFRHLYPDRKGAYTFWTYMANARARNVGWRLDYCLVSERFVPKV---- 230

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263
           ++ + R     SDH P+ +  +I
Sbjct: 231 VEHEIRSQCLGSDHCPITIFFNI 253


>gi|323699266|ref|ZP_08111178.1| exodeoxyribonuclease III [Desulfovibrio sp. ND132]
 gi|323459198|gb|EGB15063.1| exodeoxyribonuclease III [Desulfovibrio desulfuricans ND132]
          Length = 255

 Score =  165 bits (418), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 69/265 (26%), Positives = 108/265 (40%), Gaps = 15/265 (5%)

Query: 4   VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSL----NYHIE 58
           + + +WNVN  RA +      W+     D++ LQETK E      +  +      +Y   
Sbjct: 1   MIIYSWNVNGYRAVLKKDFRDWLDGCGGDVVMLQETKVEPDQLALDEREPDSFSNHYWNW 60

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
           +  +K Y+GVA  +  +PI   T LP D    + R +   +        + N+Y P+G  
Sbjct: 61  SKKKKGYSGVACFANPEPIRWDTGLPDDRFRDEGRVLHLEYP----DFHLFNIYFPNGQM 116

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
                  D            +Q L   +P++  GD+N   +  D  NP      + F   
Sbjct: 117 SDERL--DFKMGFYDTFLEHAQALRRTKPIVVGGDFNTAHREIDLKNPKANSERSGFLPV 174

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
            R    K    G+ D  R   D  H YS+W Y  ++   N G RID+  +S E    +  
Sbjct: 175 ERAWIDKFIEHGYVDTFRLFEDGPHHYSWWSYRFNARKNNAGWRIDYFFVSEELKDKVVR 234

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263
           A I+    G    SDH P+ V +D+
Sbjct: 235 AWIEPDVLG----SDHCPIGVEIDV 255


>gi|319407783|emb|CBI81434.1| exodeoxyribonuclease III [Bartonella sp. 1-1C]
          Length = 272

 Score =  165 bits (418), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 78/264 (29%), Positives = 117/264 (44%), Gaps = 9/264 (3%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64
           +ATWN+NSIR R+  +  ++   + D++CLQE K  D  FP +  ++  Y HI   GQKS
Sbjct: 5   IATWNINSIRLRLSQVLQYLDIFSVDMLCLQEIKCPDDLFPRQFFEAAGYQHIALSGQKS 64

Query: 65  YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124
           Y+GVAI+S+   I +         D   R +     ++ + +RI N Y+P G        
Sbjct: 65  YHGVAIISRLPFISVERRFFCQKEDC--RHLSVVIELHGRKIRIHNFYVPAGGDEPDVNK 122

Query: 125 DDKISWIKRF---LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180
           ++K      F   +             +  GD NI P P D ++          T  E  
Sbjct: 123 NEKFRHKLDFLEEMSSIRADHRDGLESLLLGDLNIAPLPEDVWSHKQLLKVVSHTPIETE 182

Query: 181 QSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHS 238
           +        G+ D +R        LY++W Y A  W+  ++G R+DHI  SP     +  
Sbjct: 183 RLQALCCEGGWVDLMRMKFPIPTKLYTWWSYRARDWALSDRGRRLDHIWSSPNLVPFVKE 242

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
             I    RGW +PSDH PV    D
Sbjct: 243 LTIFRDTRGWPQPSDHVPVQTLFD 266


>gi|212704397|ref|ZP_03312525.1| hypothetical protein DESPIG_02452 [Desulfovibrio piger ATCC 29098]
 gi|212672118|gb|EEB32601.1| hypothetical protein DESPIG_02452 [Desulfovibrio piger ATCC 29098]
          Length = 269

 Score =  165 bits (418), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 75/278 (26%), Positives = 110/278 (39%), Gaps = 24/278 (8%)

Query: 1   MSVVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           MS+  + +WNVN +RA        W  EN  D+I LQETK   +    E      +    
Sbjct: 1   MSI-RLVSWNVNGLRAVSAKPEWRWFAENTCDVIGLQETKAMPEQLKPEVASPEGWEAHW 59

Query: 60  ---CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                +K Y+GVA+ S+ +P+ +   LP  +   + R +   F          N Y P+G
Sbjct: 60  ASSVVKKGYSGVAVFSRIKPLAVRCELPQPEWQGEGRILHLEFE----KFHFFNGYFPNG 115

Query: 117 N----------PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
                           K               ++     +P++  GD+NI  +  D   P
Sbjct: 116 GAEELDENGKPIPGRFKRVPYKMGFFDAFTAYAEECRKSKPIVVCGDFNIAHKAIDLARP 175

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDH 225
              E +  F  E R    +   MG+ D  R  H D    YS+W Y   +  KN G RID+
Sbjct: 176 KQNEKNTGFLPEERAFLDRFTAMGYVDTFRHVHGDVEGRYSWWSYKMRAREKNVGWRIDY 235

Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             +S E    +  A I+    G    SDH PV + LDI
Sbjct: 236 FFVSEELKPYIRDAWIEDDVYG----SDHCPVGLELDI 269


>gi|87201202|ref|YP_498459.1| exodeoxyribonuclease III [Novosphingobium aromaticivorans DSM
           12444]
 gi|87136883|gb|ABD27625.1| exodeoxyribonuclease III [Novosphingobium aromaticivorans DSM
           12444]
          Length = 263

 Score =  165 bits (418), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 76/264 (28%), Positives = 118/264 (44%), Gaps = 4/264 (1%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCG 61
           +++VATWN+NS+R R   +  ++ +  PD++CLQE K  +  FP E  + L Y H    G
Sbjct: 1   MISVATWNINSVRLRADQVERFLLQEAPDVLCLQEIKCAESVFPHEVFEKLGYTHRAIHG 60

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           QK Y+GVA +S+    +   H   D+ + +   +E     N   L         G+    
Sbjct: 61  QKGYHGVATVSRIPFRDFSRHDWQDNGEARHIGVELLGPGNGLILE-NVYIPAGGDVADR 119

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180
                    +    R      ++E P +  GD+NI P   D Y+          T  EV 
Sbjct: 120 EVNPKFGQKLDFLERMTRWAEKIERPTLIVGDFNIAPLECDVYDHKALLKVVSHTPLEVE 179

Query: 181 QSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
              +     G+ D  R         YS+W Y +   +K++G R+DH+  SPEA +     
Sbjct: 180 TLQRFADAHGWVDLGRKHIPAPERNYSWWSYRSYWRAKDQGRRLDHMWASPEAAAQTRGH 239

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
           R   + R W +PSDH P+I  LD+
Sbjct: 240 RFVEETRKWDQPSDHIPLITELDL 263


>gi|194333003|ref|YP_002014863.1| exodeoxyribonuclease III Xth [Prosthecochloris aestuarii DSM 271]
 gi|194310821|gb|ACF45216.1| exodeoxyribonuclease III Xth [Prosthecochloris aestuarii DSM 271]
          Length = 258

 Score =  165 bits (418), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 63/260 (24%), Positives = 108/260 (41%), Gaps = 8/260 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVN IRAR   L  W+    PDI+ LQE K ++++ P E L    Y     G  
Sbjct: 1   MKIATWNVNGIRARKSALYDWVVGTMPDILILQELKADEESIPDEILSLEGYSKFWNGST 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQAR-FIEATFTINTQTLRIGNLYLPHGNPITST 122
              G + +      ++  +      ++        T  ++ +   +   Y+P G      
Sbjct: 61  FKKGYSGVGMLVRDDLNGNDGCYHYEIPDFDIENRTVVLHGRGFSLIGTYVPRGE--GDA 118

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
            Y  K+++++    +    L+    +I  GD N+     D ++            E R +
Sbjct: 119 HYGVKLNYLEGVATYIGGLLDEGREIILTGDMNVAHTALDVHHSQNKPGAVGLRAEERSA 178

Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             +   +G  D +R  H     LY++W Y+  +  +N G RID   LS    S +    +
Sbjct: 179 LDRQLQLGLHDIMRERHPGREGLYTWWPYWKGARERNLGWRIDCFYLSGGLLSQVQDVVV 238

Query: 242 DTKPRGWTKPSDHTPVIVSL 261
           D +     K SDH PVI+ +
Sbjct: 239 DIE----EKSSDHAPVILDI 254


>gi|319404823|emb|CBI78424.1| exodeoxyribonuclease III [Bartonella rochalimae ATCC BAA-1498]
          Length = 272

 Score =  165 bits (418), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 78/264 (29%), Positives = 117/264 (44%), Gaps = 9/264 (3%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKS 64
           +ATWN+NSIR R+  +  ++   + D++CLQE K  D  FP +  ++  Y HI   GQKS
Sbjct: 5   IATWNINSIRLRLSQVLQYLDIFSVDMLCLQEIKCPDDLFPRQFFEAAGYQHIALSGQKS 64

Query: 65  YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124
           Y+GVAI+S+   I +         D   R +     ++ + +RI N Y+P G        
Sbjct: 65  YHGVAIISRLPFISVERCFFCQKEDC--RHLSVVIELHGRKIRIHNFYVPAGGDEPDVNK 122

Query: 125 DDKISWIKRF---LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVR 180
           ++K      F   +             +  GD NI P P D ++          T  E  
Sbjct: 123 NEKFRHKLDFLEEMSSIRADQGDGLESLLLGDLNIAPLPEDVWSHKQLLKVVSHTPIETE 182

Query: 181 QSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHS 238
           +        G+ D +R        LY++W Y A  W+  ++G R+DHI  SP     +  
Sbjct: 183 RLQALCCEGGWVDLMRMKFPIPTKLYTWWSYRARDWALSDRGRRLDHIWSSPNLVPFVKE 242

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
             I    RGW +PSDH PV    D
Sbjct: 243 LAIFRDTRGWPQPSDHVPVQTLFD 266


>gi|323141860|ref|ZP_08076721.1| exodeoxyribonuclease III [Phascolarctobacterium sp. YIT 12067]
 gi|322413607|gb|EFY04465.1| exodeoxyribonuclease III [Phascolarctobacterium sp. YIT 12067]
          Length = 236

 Score =  165 bits (418), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 71/245 (28%), Positives = 112/245 (45%), Gaps = 11/245 (4%)

Query: 19  HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIE 78
              A +++E  PDIICLQETK + +   F        +  +  +K Y+G A+ +K +P+ 
Sbjct: 3   KGFAEFLQEAAPDIICLQETKMQREQADF-VFPGYEEYWNSAERKGYSGTAVFTKVKPLA 61

Query: 79  IVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFA 138
           +   L  ++ D + R I   F      + +       G      +        +   R  
Sbjct: 62  VTYGLGQEEHDKEGRVITLEFASF-YLVTVYTPNSKDGLARLDYR-----MVWEDVFRAY 115

Query: 139 SQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT 198
            Q L+ ++P++  GD N+  +  D  NP     +A FT E R  F++L+  GFTD+ R  
Sbjct: 116 LQELDAKKPVVVCGDLNVAAEEIDLKNPKTNRRNAGFTDEERAKFRELKAAGFTDSFRYL 175

Query: 199 HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVI 258
           H     YS+W Y   +  KN G RID+ ++S      L SA I  +  G    SDH PV 
Sbjct: 176 HPEEVKYSWWSYRFKAREKNAGWRIDYFVVSDRIADKLQSAEIHNEVFG----SDHCPVS 231

Query: 259 VSLDI 263
           + LD+
Sbjct: 232 IELDV 236


>gi|34580716|ref|ZP_00142196.1| exodeoxyribonuclease III [Rickettsia sibirica 246]
 gi|28262101|gb|EAA25605.1| exodeoxyribonuclease III [Rickettsia sibirica 246]
          Length = 271

 Score =  165 bits (417), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 78/269 (28%), Positives = 124/269 (46%), Gaps = 7/269 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62
           + + TWN+NS+R RI  L     E+ PDII LQETK  D  FP E ++++ Y H+   GQ
Sbjct: 1   MKIVTWNINSLRLRIDLLRKLAYEHQPDIILLQETKVADSLFPLEVIKNIGYEHVIYSGQ 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           KSYNGVAI+SK+   ++ +    +        I     I+   +          +   +T
Sbjct: 61  KSYNGVAIISKFPLNDVFSLELYNSDKRHIAAIVNDIEIHNFYV---PAGGDIPDIEVNT 117

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           K+  K+ +++    + +      + +I  GD NI P  HD ++     N    T   R  
Sbjct: 118 KFKHKLEYVRLMQEWLTTNRTKNDKMIIVGDLNIAPHEHDVWSSKQLRNVISHTDIERSL 177

Query: 183 FQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLLHSA 239
             +LQN       +          Y++W Y    W K N+G R+DHI +S      L S 
Sbjct: 178 LVELQNALGFIDSSRHFVSLDEKFYTWWSYRNIDWKKSNRGRRLDHIWVSDNLKGALVSM 237

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268
            + ++ R W+ PSDH P  V+ ++    +
Sbjct: 238 HLLSEARDWSSPSDHVPYFVTFNLQMSSR 266


>gi|145590186|ref|YP_001156783.1| exodeoxyribonuclease III Xth [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145048592|gb|ABP35219.1| exodeoxyribonuclease III Xth [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 260

 Score =  165 bits (417), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 58/267 (21%), Positives = 105/267 (39%), Gaps = 15/267 (5%)

Query: 3   VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IET 59
           ++ + + N+N IR A       W  +   D IC+QE K +  +     L     H     
Sbjct: 1   MLRIISANLNGIRSAVKKGFLPWAVKQKADFICMQELKAQRDDLEDAILNPDGLHGFFHH 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G  I + ++P E++     ++ D + R++EA F      L + ++Y+P G+  
Sbjct: 61  AEKKGYSGCGIYTPHKPDEVLYGYGNEEFDAEGRYVEARFKG----LSVISVYMPSGSSS 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                + K  ++  FL            ++  GD NI     D  N      ++ F  E 
Sbjct: 117 PER-QEAKYRYLDSFLPHLIALKNSGREIVLCGDVNIAHHEIDLKNWKGNLKNSGFLPEE 175

Query: 180 RQSFQKLQNMGFTDAIRATHDT---HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
           R     L +      +    +       Y++W     +++KN G RID+ + +P   +  
Sbjct: 176 RAWLTNLFDQVGYVDVYRELEPKATETCYTWWSNRGQAYAKNVGWRIDYHISTPSIAASA 235

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263
               +        K SDH P+ V  D 
Sbjct: 236 KKTAVYKD----EKFSDHAPLTVDYDW 258


>gi|302334904|ref|YP_003800111.1| exodeoxyribonuclease III Xth [Olsenella uli DSM 7084]
 gi|301318744|gb|ADK67231.1| exodeoxyribonuclease III Xth [Olsenella uli DSM 7084]
          Length = 263

 Score =  165 bits (417), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 61/264 (23%), Positives = 110/264 (41%), Gaps = 15/264 (5%)

Query: 4   VTVATWNVNSIRARIHN---LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           + + +WNVN +RA +           + + D+  +QETK ++     + L          
Sbjct: 11  LKLVSWNVNGLRAVMRKDPSFLQIFSQLDADVFAIQETKLQEGQVELD-LPGYFQTWNFA 69

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+G A+ S+  P+ ++  +  D  D + R     F          ++Y P+     
Sbjct: 70  ERKGYSGTAVFSREDPLRVIRQIGSDVADDEGRVCALEFPT----FWFVDVYTPNSKQGL 125

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
           +   +          R     L+  +P++  GD+N+  Q  D  NP     +  F+   R
Sbjct: 126 ARIEER--MGWDERFRLFLLELDAHKPIVTCGDFNVAHQEIDLRNPSTNHENPGFSDAER 183

Query: 181 QSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
            SF +L + GFTD  R+ +      YS+W Y   +  +N G RID+ + S      +  A
Sbjct: 184 DSFGRLLDAGFTDTFRSLNPDLEGAYSWWSYRMRARERNVGWRIDYFLTSERVADRIEGA 243

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
            I  +  G    SDH P+ + + +
Sbjct: 244 SIHDEVFG----SDHCPIELQIRL 263


>gi|184201443|ref|YP_001855650.1| putative exodeoxyribonuclease III [Kocuria rhizophila DC2201]
 gi|183581673|dbj|BAG30144.1| putative exodeoxyribonuclease [Kocuria rhizophila DC2201]
          Length = 279

 Score =  165 bits (417), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 62/273 (22%), Positives = 100/273 (36%), Gaps = 13/273 (4%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           V +AT NVN IRA     +A W+     D++CLQE +  DK    E L    + ++    
Sbjct: 8   VRIATVNVNGIRAAYRRGMADWLAPRGVDLLCLQEVRAPDK-ITRELLDEDVWDVQHTEA 66

Query: 63  KSYNGVAIL---------SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
            +     +          S   P      +  +  D   R+IE   T+            
Sbjct: 67  AAKGRAGVAIATRRDAFDSALLPTAARVGIGEEYFDDSGRWIENDVTLPNGETLTLVSAY 126

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
            H   + + K  DK  ++   L    Q  +  +  +  GD N+     D  N      +A
Sbjct: 127 VHSGEVDTPKQTDKYRFMDAMLTRLPQLAQGSDHALVVGDLNVGHTERDIKNWKGNVKNA 186

Query: 174 CFTLEVRQSFQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
            F  E R  F +          A     D    Y++W Y   ++  + G RID+ M +P 
Sbjct: 187 GFLPEERAYFDRFFGDVGYVDVARSLAGDVPGPYTWWSYRGKAFDTDAGWRIDYHMATPG 246

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
             +   SA +D       + SDH P++V   + 
Sbjct: 247 LAARARSATVDRAASYHVRFSDHAPLVVDYALD 279


>gi|220911966|ref|YP_002487275.1| exodeoxyribonuclease III Xth [Arthrobacter chlorophenolicus A6]
 gi|219858844|gb|ACL39186.1| exodeoxyribonuclease III Xth [Arthrobacter chlorophenolicus A6]
          Length = 277

 Score =  165 bits (417), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 62/269 (23%), Positives = 111/269 (41%), Gaps = 10/269 (3%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + +A+ NVN +RA     +AAW++  + DI+CLQE +  D        +  +        
Sbjct: 10  LRIASVNVNGLRAAYKNGMAAWLEPRDVDILCLQEVRAPDAIVRQLLGEGWHILHAEAEA 69

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT-----QTLRIGNLYLPHGN 117
           K   GVAI S+ +PI     +  D      R++EA F +         L + + Y+  G 
Sbjct: 70  KGRAGVAIASREEPIATRNGIGDDYFATAGRWVEADFRVTDASGERVQLTVASAYVHSGE 129

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
            + + K DDK  ++        +  +  +  +  GD N+   P D  N       A F  
Sbjct: 130 -VDTPKQDDKYRFLDAMSTRLPELSKHSDHALVVGDLNVAHTPLDIRNWKGNLKKAGFLP 188

Query: 178 EVRQSFQKLQNM---GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
           + R  F +               + +    Y++W +   ++  + G RID+ + +P   +
Sbjct: 189 DERAYFDRFLGEDIGWHDVHRTMSGEMDGPYTWWSWRGKAFDNDAGWRIDYHLATPALAA 248

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              SA +D      T+ SDH P++V   +
Sbjct: 249 SATSAVVDRAATYDTRFSDHAPLVVDYQL 277


>gi|238650485|ref|YP_002916337.1| exodeoxyribonuclease III [Rickettsia peacockii str. Rustic]
 gi|238624583|gb|ACR47289.1| exodeoxyribonuclease III [Rickettsia peacockii str. Rustic]
          Length = 271

 Score =  165 bits (417), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 79/271 (29%), Positives = 123/271 (45%), Gaps = 7/271 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62
           + + TWN+NS+R RI  L     E+ PDII LQETK  D  FP E ++++ Y H+   GQ
Sbjct: 1   MKIVTWNINSLRLRIDLLRKLAYEHQPDIILLQETKVADSLFPLEVIKNIGYEHVIYSGQ 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           KSYNGVAI+SK+    + +    +        I     I+   +          +   +T
Sbjct: 61  KSYNGVAIISKFPLNNVFSLELYNSDKRHIAAIVNDIEIHNFYV---PAGGDIPDIEVNT 117

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           K+  K+ +++    + +      + +I  GD NI P  HD ++     N    T   R  
Sbjct: 118 KFKHKLEYVRLMQEWLTTNRTKNDKMIIVGDLNIAPHEHDVWSSKQLRNVISHTDIERSL 177

Query: 183 FQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLLHSA 239
             +LQN       +          Y++W Y    W K N+G R+DHI +S      L S 
Sbjct: 178 LVELQNALGFIDSSRHFVSLDEKFYTWWSYRNIDWKKSNRGRRLDHIWVSDNLKGALFSM 237

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQ 270
            + ++ R W  PSDH P  V+ ++    + Q
Sbjct: 238 HLLSEARDWFSPSDHVPYFVTFNLQMSSRDQ 268


>gi|317486298|ref|ZP_07945130.1| exodeoxyribonuclease III [Bilophila wadsworthia 3_1_6]
 gi|316922468|gb|EFV43722.1| exodeoxyribonuclease III [Bilophila wadsworthia 3_1_6]
          Length = 263

 Score =  164 bits (416), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 67/269 (24%), Positives = 105/269 (39%), Gaps = 13/269 (4%)

Query: 1   MSVVTVATWNVNSIRARIHNL--AAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           M  + + +WNVN  RA +       W    + D++ LQETK E      E      ++ E
Sbjct: 1   MDTIRLVSWNVNGFRA-LSGKPDWDWFASTDADVVALQETKAEPSQIAEEHRSPEGWNAE 59

Query: 59  T---CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
                 +K Y+GVA+ S+ +       +  +  D + +       I        N+Y P+
Sbjct: 60  WLAAQVKKGYSGVAVFSRQKAALEPLAVHRELPDPRYQGEGRLLHIEYPAFHFFNVYFPN 119

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
           G                      ++ L   +P++  GD+N   +P D   P   E ++ F
Sbjct: 120 GTKDDGRL--AYKMGYYDAFLAHAEELRRTKPIVVCGDFNTAHRPIDLARPKANEENSGF 177

Query: 176 TLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
               R    +    G+ D  R  H D  H YS+W Y   +   N G RID+  +S E   
Sbjct: 178 LPIERAWVDRFIAAGYVDTFRHIHGDEPHQYSWWSYKQRARVNNVGWRIDYFFVSEELAP 237

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            +  A I+    G    SDH PV + L I
Sbjct: 238 AIRDAWIENNVYG----SDHCPVGLELAI 262


>gi|237749208|ref|ZP_04579688.1| exodeoxyribonuclease III [Oxalobacter formigenes OXCC13]
 gi|229380570|gb|EEO30661.1| exodeoxyribonuclease III [Oxalobacter formigenes OXCC13]
          Length = 260

 Score =  164 bits (416), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 61/266 (22%), Positives = 108/266 (40%), Gaps = 15/266 (5%)

Query: 3   VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59
           + ++ + N+N IR A       W+  +  D +CLQE K +  +   E      Y  + E 
Sbjct: 1   MFSITSVNLNGIRSAVKKGFLDWMNRSGSDFVCLQEIKAQSCDITPEVATPDGYQGYFEC 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G  I +K  P +I       + D + R+ +  F        + +LY P G+  
Sbjct: 61  AEKKGYSGTGIYTKTMPDKIENGFGSKEFDAEGRYFQCDFR----DFSLVSLYAPSGSSS 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                + K  ++  F  +  +  +     +  GD+NI  +  D  N    + ++ F  E 
Sbjct: 117 PER-QEAKFRFMDEFYPYLKKLKDSGREFVICGDWNIAHKEIDLKNWKSNQKNSGFLPEE 175

Query: 180 RQS-FQKLQNMGFTDAIRATHDTH--HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
           R         +G+ D  R  H       Y++W     +++KN G RID+ + +P      
Sbjct: 176 RAWLTDVFDELGWVDVYRLLHPDTTGEAYTWWSNRGQAYAKNVGWRIDYQIATPGIAKKA 235

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLD 262
            SA I        + SDH P+ +  D
Sbjct: 236 VSADIYK----GERFSDHAPLTIRYD 257


>gi|294651921|ref|ZP_06729210.1| exodeoxyribonuclease III [Acinetobacter haemolyticus ATCC 19194]
 gi|292822153|gb|EFF81067.1| exodeoxyribonuclease III [Acinetobacter haemolyticus ATCC 19194]
          Length = 294

 Score =  164 bits (416), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 62/267 (23%), Positives = 111/267 (41%), Gaps = 7/267 (2%)

Query: 2   SVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIET 59
            ++ V + NVN +RA +   L  W+++++ D++C+QE++   + +  +      Y H+  
Sbjct: 32  KILRVVSINVNGLRASVTKGLLEWLEQSDADVVCMQESRITHEQWTDKFKPEGWYTHLFP 91

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +  Y G AI S+   + +   L  +  D Q RFI A F +                  
Sbjct: 92  AERAGYAGTAIYSRLPFVSVTNGLGFELADSQGRFITAEFDLGLSHPVHIASLYLPSGSS 151

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-E 178
                  K  +++ + +   Q  +  + +I  GDYNI+ +  D  N    +  +     E
Sbjct: 152 GDEAQARKDVFLEEYAKILKQWRDENKSIIVCGDYNIVHKRIDIKNWSGNQKSSGVLPHE 211

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
                     +G+ D  R       LYS+W     + +KN G RID+   SP+  +   +
Sbjct: 212 RSWLDHIYDELGYVDTFREVRPEAELYSWWSNRGQARAKNVGWRIDYHACSPDWKARTAN 271

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           A +  +       SDH PVI+   I E
Sbjct: 272 AWVYKE----QWFSDHAPVIIDYKIHE 294


>gi|303248033|ref|ZP_07334299.1| exodeoxyribonuclease III [Desulfovibrio fructosovorans JJ]
 gi|302490590|gb|EFL50495.1| exodeoxyribonuclease III [Desulfovibrio fructosovorans JJ]
          Length = 254

 Score =  164 bits (416), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 53/260 (20%), Positives = 91/260 (35%), Gaps = 9/260 (3%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +  N   W+     D++ +QE+K +  +           +      
Sbjct: 1   MILMSWNVNGLRAVVQKNFWDWLSGCGADVVGIQESKIQPGH--EADFGGTEVYRTVWSS 58

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
            +                  +  +  D           +        N+Y P+G      
Sbjct: 59  ATVKKGYSGVGCFYRVEPHDISLELPDEAYVGEGRLIQMEFDDFYFFNVYFPNGGRGPDR 118

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                           ++ L  ++P++  GD+N      D  N    E  + F  E R  
Sbjct: 119 L--AYKFGYYDAFLAHAETLRRKKPIVVCGDFNTAHTALDLKNAKSNEKTSGFLPEERAW 176

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
             +    G+ D  R        Y++WDY   +  +N G RID+  +S E    +  A ID
Sbjct: 177 LDRFIAAGYVDTFRMFEPEGGHYTWWDYRFKARDRNVGWRIDYFFVSEELRGKVRRAWID 236

Query: 243 TKPRGWTKPSDHTPVIVSLD 262
           +   G    SDH PV + LD
Sbjct: 237 SAVMG----SDHCPVGLDLD 252


>gi|283850748|ref|ZP_06368035.1| exodeoxyribonuclease III Xth [Desulfovibrio sp. FW1012B]
 gi|283573991|gb|EFC21964.1| exodeoxyribonuclease III Xth [Desulfovibrio sp. FW1012B]
          Length = 254

 Score =  164 bits (416), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 67/263 (25%), Positives = 111/263 (42%), Gaps = 15/263 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET--- 59
           + + +WNVN +RA +      W+  +  D++ +QE+K +  +   +   +  Y       
Sbjct: 1   MILMSWNVNGLRAVVQKGFWEWLSGSGADVVGIQESKLQTGH-EADFGHTGGYKTVWLSS 59

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GV  L + +P  I   LP      + R I+  F          N+Y P+G   
Sbjct: 60  TVKKGYSGVGCLYRVEPRSIGLDLPDAAWCGEGRLIQMEF----NDFYFFNVYFPNGG-R 114

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +   K+ + + FL   ++ L  ++P++  GD+N      D  N    E  + F  E 
Sbjct: 115 GPERLAYKLGYYEAFLAH-AEALRRKKPIVVCGDFNTAHTALDLKNAKANEKTSGFLPEE 173

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R         G+ D  R        YS+WDY   +  +N G RID+  +S E    +  A
Sbjct: 174 RAWLDGFVAAGYVDTFRMFEKEGGHYSWWDYRFKARDRNVGWRIDYFFVSEELRPRVKRA 233

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
            ID    G    SDH PV + +D
Sbjct: 234 WIDNTVFG----SDHCPVGLEID 252


>gi|213512198|ref|NP_001135227.1| DNA-(apurinic or apyrimidinic site) lyase [Salmo salar]
 gi|197631957|gb|ACH70702.1| APEX nuclease 1 [Salmo salar]
 gi|209154634|gb|ACI33549.1| DNA-apurinic or apyrimidinic site lyase [Salmo salar]
 gi|209154684|gb|ACI33574.1| DNA-apurinic or apyrimidinic site lyase [Salmo salar]
          Length = 312

 Score =  164 bits (416), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 72/262 (27%), Positives = 123/262 (46%), Gaps = 16/262 (6%)

Query: 4   VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQ----SLNYHIE 58
           + + +WNV+ +RA +      W+++  PD++CLQETK  +K+ P E          Y   
Sbjct: 57  MKITSWNVDGLRAWVKKKGLDWVRDEAPDVLCLQETKCAEKSLPDEITSMPEFPHKYWAG 116

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
           +  ++ Y+GVA+L K +P+++   +  ++ D + R I A F        +       G  
Sbjct: 117 SDEKEGYSGVAMLCKTEPLKVTYGIGKEEHDKEGRVITAEFPTF---FLVTAYVPNSGRG 173

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
           +    Y        +        L+  +PL+  GD N+  +  D  N    + +A FT E
Sbjct: 174 LVRLDYRKTWDVEFKAY---LSDLDKRKPLVLCGDLNVAHEEIDLKNSKGNKKNAGFTAE 230

Query: 179 VRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
            R+ F +L   GFTD+ R  +    + Y+FW Y  +S SKN G R+D+ +LS      L 
Sbjct: 231 EREGFNQLLAAGFTDSFRELYPEQANAYTFWTYMMNSRSKNVGWRLDYFVLSSALLPGLC 290

Query: 238 SARIDTKPRGWTKPSDHTPVIV 259
            ++I  +  G    SDH P+ +
Sbjct: 291 DSKIRNQAMG----SDHCPITL 308


>gi|119962536|ref|YP_947021.1| exodeoxyribonuclease III [Arthrobacter aurescens TC1]
 gi|119949395|gb|ABM08306.1| exodeoxyribonuclease III [Arthrobacter aurescens TC1]
          Length = 277

 Score =  164 bits (416), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 61/277 (22%), Positives = 105/277 (37%), Gaps = 14/277 (5%)

Query: 1   MSV------VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           MS       + +A+ NVN +RA     +A W++    DI+CLQE +  D        +  
Sbjct: 1   MSTALKKDFLRIASVNVNGLRAAYKNGMAEWLEPREVDILCLQEVRAPDDIVRKLIGEGW 60

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN--- 110
           +        K   GVAI S+ +P      +  D  D   R++EA +T+            
Sbjct: 61  HILHTEAEAKGRAGVAIASREEPTATRVGIGDDYFDTSGRWVEADYTVQNAAGEFTTLSV 120

Query: 111 -LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
                H   + + K +DK  ++        +  +  +  +  GD N+     D  N    
Sbjct: 121 VSAYVHSGEVGTPKQEDKFRFLDAMTVRLPELAKHSDHALVVGDLNVGHTELDIKNWKGN 180

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATH---DTHHLYSFWDYYADSWSKNKGIRIDHI 226
              A F  E R  F +                 +    Y++W     ++  + G RID+ 
Sbjct: 181 VKRAGFLPEERAYFDRFLGEEIGWRDVHRGLAGNVAGPYTWWSQRGKAFDTDTGWRIDYH 240

Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           + +P   +   SA +D  P   T+ SDH P++V   +
Sbjct: 241 LATPGLAAAAFSAVVDRAPSWDTRFSDHAPLVVDYRL 277


>gi|71905765|ref|YP_283352.1| AP endonuclease [Dechloromonas aromatica RCB]
 gi|71845386|gb|AAZ44882.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth
           [Dechloromonas aromatica RCB]
          Length = 259

 Score =  164 bits (416), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 69/266 (25%), Positives = 114/266 (42%), Gaps = 15/266 (5%)

Query: 3   VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++ + + N+N IR A   N+  W+   N D+ICLQE K +  +   E +           
Sbjct: 1   MLRIISLNLNGIRSAWSKNVLPWVAAQNADVICLQELKAQLPDLTPEMMAPDGMQAFYHC 60

Query: 62  --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GV I S+ +P  ++    G + D + R+I A F      L + +LYLP G+  
Sbjct: 61  AEKKGYSGVGIWSREKPDRVIEGFDGGEFDAEGRYIRADFG----NLSVISLYLPSGSSS 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                + K  ++  F             ++  GD+NI  Q  D  N    + ++ F  E 
Sbjct: 117 PER-QEAKFRFLDVFFPQMLALRAEGREIVLCGDWNIAHQAIDLKNWKSNQKNSGFLPEE 175

Query: 180 RQSFQKLQNMG-FTDAIRATHDT--HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
           R    +L     + D  R  H       Y++W     +W+KN G RID+ + +P    + 
Sbjct: 176 RAWLSRLFEEQGWVDVYRRLHPETTDACYTWWSNRGQAWAKNVGWRIDYQIATPGIAVMA 235

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLD 262
             A +    R     SDH P+I+  D
Sbjct: 236 VQAEVYKDER----FSDHAPLIIDYD 257


>gi|296116318|ref|ZP_06834934.1| exodeoxyribonuclease III Xth [Gluconacetobacter hansenii ATCC
           23769]
 gi|295977137|gb|EFG83899.1| exodeoxyribonuclease III Xth [Gluconacetobacter hansenii ATCC
           23769]
          Length = 264

 Score =  164 bits (415), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 89/265 (33%), Positives = 123/265 (46%), Gaps = 6/265 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62
           + + TWN+NS+R R+  L     EN PDI+CLQETK  D  FP + +Q+L + H+   G 
Sbjct: 1   MRIMTWNINSLRLRLPLLERLCAENQPDIVCLQETKVTDDLFPLDAVQALGFPHVCFRGM 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           KSYNGVAILS+     + T  P        R I       T  + + + Y+P G  I   
Sbjct: 61  KSYNGVAILSRQPMRML-TDTPDWCDRGDCRHIAVECGEGTDAVTVHDFYVPAGGDIPDP 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             + K +    F+  A       +       GD NI P  HD ++          T E  
Sbjct: 120 VENPKFAHKLAFVEEARAWFAQRDVCRTVVVGDLNIAPLEHDVWSHRQLLKIVSHTPEET 179

Query: 181 QSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLLHS 238
                 QN GF DA+R        LY++W Y    W + N+G R+DH+ ++P+    L  
Sbjct: 180 SRLLAWQNSGFVDAMRHFVPADEKLYTWWSYRNRDWSASNRGRRLDHVWVTPDLVPALRD 239

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263
             +    R W KPSDH PVIV L I
Sbjct: 240 MSVLRPVRDWEKPSDHVPVIVDLAI 264


>gi|295396429|ref|ZP_06806591.1| exodeoxyribonuclease III [Brevibacterium mcbrellneri ATCC 49030]
 gi|294970731|gb|EFG46644.1| exodeoxyribonuclease III [Brevibacterium mcbrellneri ATCC 49030]
          Length = 272

 Score =  164 bits (415), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 59/268 (22%), Positives = 108/268 (40%), Gaps = 6/268 (2%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN--YHIET 59
           ++TVA+ NVN IRA +   +  W  +N P I+ LQE +  +    +  ++      +   
Sbjct: 1   MITVASVNVNGIRAAMRKGMEPWFNQNTPQILTLQEVRAAND-IAYSVMEPFGGSAYSAD 59

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
              K   GVA++S+    E+   +  +      R+IE  + ++  +         H    
Sbjct: 60  AEAKGRAGVAVVSQTPAREVRIGIGDEYFAGAGRWIECDYDLDDGSTLTVVSAYVHSGEA 119

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
            + K DDK  ++ R      Q     +  +  GD N+     D  N    +  A F  E 
Sbjct: 120 GTPKQDDKYRFLDRMKERLPQLARHADYALVTGDLNVGHTELDIKNWKANQKKAGFLPEE 179

Query: 180 RQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
           R  F +         +      +    Y++W     ++  + G RID+ M +P    L  
Sbjct: 180 RAYFDEFFGDLGWIDVHRKLSGEVPGPYTWWSMRGKAFDNDAGWRIDYHMATPNLAELAS 239

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           +A++        + SDH P+++  D+PE
Sbjct: 240 NAQVHRAASWGERWSDHAPLVIDYDLPE 267


>gi|149925921|ref|ZP_01914184.1| DNA-(apurinic or apyrimidinic site) lyase [Limnobacter sp. MED105]
 gi|149825209|gb|EDM84420.1| DNA-(apurinic or apyrimidinic site) lyase [Limnobacter sp. MED105]
          Length = 260

 Score =  164 bits (415), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 63/268 (23%), Positives = 114/268 (42%), Gaps = 15/268 (5%)

Query: 3   VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIET 59
           +  + + N+N IR A       W+ ++  D++C+QE K    +   E LQ   Y  + + 
Sbjct: 1   MTRIISANLNGIRSAHTKGFFDWMNQSQADVVCVQEIKAHLADLGPEHLQPGAYKGYFQA 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GV +  K +PI+++  L   + D + R + A F        I +         
Sbjct: 61  AEKKGYSGVGLYCKVEPIDVIYGLNNAEFDAEGRMVTAEFENM-----IVSSIYFPSGSS 115

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
           +  + + K  +++ F     +    ++P++  GD+NI  Q  D  N      ++ FT E 
Sbjct: 116 SEERQEAKFRFLEHFAEIFDEFESKKKPVVLCGDWNIAHQEIDLKNWKGNLKNSGFTPEE 175

Query: 180 RQSFQKLQNMGFTDA---IRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
           R     + N         +    +T   Y++W     +++KN G RID+ M+SP     +
Sbjct: 176 RAWIGDVINKRGWIDAYRVLYPEETDGCYTWWSNRGQAYAKNVGWRIDYQMVSPALRDSI 235

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDIP 264
               +        K SDH P+I   D P
Sbjct: 236 REVSVYK----GQKFSDHAPLIADYDHP 259


>gi|171464285|ref|YP_001798398.1| exodeoxyribonuclease III Xth [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|171193823|gb|ACB44784.1| exodeoxyribonuclease III Xth [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 260

 Score =  164 bits (415), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 62/267 (23%), Positives = 108/267 (40%), Gaps = 15/267 (5%)

Query: 3   VVTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IET 59
           ++ + + N+N IR+ I      W  +   D IC+QE K +  +     L     H     
Sbjct: 1   MLRIISANLNGIRSAIKKGFLPWAVQQKADFICMQELKAQRDDLEDTILNPDGMHGFFHH 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+G  I + Y+P E++      + D + R++EA F      L + ++Y+P G+  
Sbjct: 61  AEKKGYSGCGIYAPYKPDEVLYGYGNAEFDAEGRYVEARFKG----LSVISVYMPSGSSS 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                + K  ++  FL       +L   ++  GD NI  Q  D  N      ++ F  E 
Sbjct: 117 PER-QEAKYRYLDSFLPHLVALKKLGREIVLCGDVNIAHQEIDLKNWKGNLKNSGFLPEE 175

Query: 180 RQSFQKLQNMGFTDAIRATHDT---HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
           R     L +      +    +       Y++W     +++KN G RID+ + +P      
Sbjct: 176 RAWLTNLFSKVGYVDVYRQLEPKATETCYTWWSNRGQAYAKNVGWRIDYHISTPGIAQTA 235

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263
             A +        K SDH P+ V  D 
Sbjct: 236 KKATVYKD----EKFSDHAPLTVDYDW 258


>gi|159042592|ref|YP_001531386.1| exodeoxyribonuclease III [Dinoroseobacter shibae DFL 12]
 gi|157910352|gb|ABV91785.1| exodeoxyribonuclease III [Dinoroseobacter shibae DFL 12]
          Length = 262

 Score =  164 bits (415), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 85/268 (31%), Positives = 121/268 (45%), Gaps = 11/268 (4%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIET 59
           MS+ T+ATWN+NS+R R   +A  +++  PD++CLQE K+     P ET  +  Y H+  
Sbjct: 1   MSI-TIATWNINSVRLRADLVARLLRDEAPDVLCLQECKSPVDKIPLETFAARGYGHMVA 59

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            GQK YNGVAILS+    +          D +              L I N Y+P G  +
Sbjct: 60  RGQKGYNGVAILSRLPLEDAGHRDFVGKGDARHVAARLENG-----LTIHNYYVPAGGDV 114

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTL 177
                ++K      FL           P      GD NI P+  D ++          T 
Sbjct: 115 PDRDVNEKFGHKLDFLAEMRAWFTDTAPEKSVLVGDLNIAPREDDVWSHKQLLKVVSHTP 174

Query: 178 -EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSL 235
            EV       +   + D  RA      LYS+W Y A  W + +KG R+DH+  S +  + 
Sbjct: 175 IEVDTFETTREAGNWVDVTRADIPEGQLYSWWSYRARDWSAADKGRRLDHVWASADIAAA 234

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            H +RI  + RGW +PSDH PV  S D+
Sbjct: 235 AHGSRILREVRGWDQPSDHAPVFASFDL 262


>gi|255320035|ref|ZP_05361231.1| exodeoxyribonuclease III [Acinetobacter radioresistens SK82]
 gi|262380541|ref|ZP_06073695.1| exodeoxyribonuclease III [Acinetobacter radioresistens SH164]
 gi|255302903|gb|EET82124.1| exodeoxyribonuclease III [Acinetobacter radioresistens SK82]
 gi|262297987|gb|EEY85902.1| exodeoxyribonuclease III [Acinetobacter radioresistens SH164]
          Length = 273

 Score =  164 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 62/265 (23%), Positives = 109/265 (41%), Gaps = 7/265 (2%)

Query: 2   SVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIET 59
            ++ V + NVN +R+ +   L  W+++++ D+IC+QE++     +  +      Y H+  
Sbjct: 12  KILRVVSINVNGLRSSVTKGLLEWLEQSDADVICMQESRITHAQWTDKFKPEGWYTHLFP 71

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +  Y G AI S+   I +   L  +  D Q RF+ A F +                  
Sbjct: 72  AERPGYAGTAIYSRLPFISVKDGLGFELADSQGRFVTAEFDLGFGYPVYICSLYLPSGSS 131

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-E 178
                  K  +++ + +   Q  E  + +I  GDYNI+ +  D  N    +  +     E
Sbjct: 132 GDEAQARKDYFLEEYQKILKQWREEGKSIIICGDYNIVHKRIDIKNWSGNQKSSGCLPHE 191

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
                     +G+ D  R       LYS+W     + +KN G RID+   SP+  +   +
Sbjct: 192 RAWLDHIYDELGYVDTFREVRPEAELYSWWSNRGQARAKNVGWRIDYQACSPDWKNRTVN 251

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263
           A +  +       SDH PVI+   I
Sbjct: 252 AWVYKE----QWFSDHAPVIIDYKI 272


>gi|325285209|ref|YP_004260999.1| exodeoxyribonuclease III Xth [Cellulophaga lytica DSM 7489]
 gi|324320663|gb|ADY28128.1| exodeoxyribonuclease III Xth [Cellulophaga lytica DSM 7489]
          Length = 254

 Score =  164 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 65/263 (24%), Positives = 114/263 (43%), Gaps = 14/263 (5%)

Query: 4   VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFET--LQSLNYHIETC 60
           + + +WNVN +RA +       +K  NPDI+C+QETK +D         L++ +    + 
Sbjct: 1   MHIVSWNVNGVRAVVKKEFFESVKYMNPDILCIQETKAQDNEVAKALSPLENFSLASNSA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+G A LS  +P+ I   +  +  D + R +   +        + N+Y+P+     
Sbjct: 61  NKKGYSGTATLSSTKPLTIKADIGIEAHDTEGRVLCTEYE----NFYLVNVYVPNSGQKL 116

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND-ACFTLEV 179
                +      +      + LE ++P+I  GD+N+  +  D  N     N  A +T   
Sbjct: 117 DRL--EYRKQWDKDFLDYLKNLEKKKPVIACGDFNVAHKAIDLKNDKSNYNKTAGYTQTE 174

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
                     GF D+ R  H    +Y+FW Y   S  +N G RID+ ++S      +   
Sbjct: 175 IDGMNNFIADGFVDSFRMLHPDEVVYTFWSYRFKSRERNTGWRIDYFLVSQSIKDKVKEV 234

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
            + +   G    SDH P+ + +D
Sbjct: 235 TVFSDIMG----SDHCPIGLKID 253


>gi|189345695|ref|YP_001942224.1| exodeoxyribonuclease III Xth [Chlorobium limicola DSM 245]
 gi|189339842|gb|ACD89245.1| exodeoxyribonuclease III Xth [Chlorobium limicola DSM 245]
          Length = 258

 Score =  164 bits (414), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 65/263 (24%), Positives = 110/263 (41%), Gaps = 8/263 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A+WN+N IRAR  +L AWI  N PDI+ LQE K  +++ P   +  L+ + +     
Sbjct: 1   MKIASWNINGIRARNASLEAWILRNQPDILLLQEVKAHEEDIPP-AISDLDAYRKFWNGS 59

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +       +     +                   T  ++T    +   Y+P G       
Sbjct: 60  TVRKGYSGTGILLRDSCKVDDVVWEVPDFDIENRTGVLHTTHFTLIGTYVPRGESDE--H 117

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ +++   R+    L+    +I AGD NI  +  D +             E R + 
Sbjct: 118 YRIKLDYLESLRRYICSLLDSGRQVILAGDMNIAHRDIDVHRSQNKPGAVGLRPEERAAI 177

Query: 184 QKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
                 G  D +R+ H     L+++W Y+  +  +N G RID   LS E  + +  A +D
Sbjct: 178 DAQIASGLQDIMRSMHPDAADLFTWWPYWKPARERNLGWRIDCFYLSSELAAKVTVASVD 237

Query: 243 TKPRGWTKPSDHTPVIVSLDIPE 265
            +     K SDH PVI+ L + +
Sbjct: 238 LE----EKSSDHAPVILELSLQD 256


>gi|239906954|ref|YP_002953695.1| exodeoxyribonuclease III [Desulfovibrio magneticus RS-1]
 gi|239796820|dbj|BAH75809.1| exodeoxyribonuclease III [Desulfovibrio magneticus RS-1]
          Length = 254

 Score =  164 bits (414), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 63/263 (23%), Positives = 104/263 (39%), Gaps = 15/263 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTE---DKNFPFETLQSLNYHIET 59
           + + +WNVN +RA +      W+  +  D++ +QE+K +   + +F     Q       +
Sbjct: 1   MILVSWNVNGLRAVVQKGFWDWLAGSGADVVGIQESKIQTGHEADFGHTD-QYKTVWCSS 59

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GV    + +P+ I   LP      + R +   +          N+Y P+G   
Sbjct: 60  TVKKGYSGVGCFYRAEPLSIAMELPDPAFAGEGRLLHLEYE----EFHFFNIYFPNGGRG 115

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                              ++ L   +P++  GD+N      D  N    E  + F  E 
Sbjct: 116 PERL--AYKLGYYDAFLAHAEELRKHKPIVVCGDFNTAHTALDLKNAKANEKTSGFLPEE 173

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R    +    G+ D  R        YS+WDY   +  +N G RID+  +S E    +  A
Sbjct: 174 RAWLDRFVAAGYVDTFRLFTTEGGHYSWWDYRFKARDRNVGWRIDYFFVSEELRPKVKRA 233

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
            ID    G    SDH PV + LD
Sbjct: 234 WIDAAVMG----SDHCPVGLELD 252


>gi|220904154|ref|YP_002479466.1| exodeoxyribonuclease III Xth [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219868453|gb|ACL48788.1| exodeoxyribonuclease III Xth [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 268

 Score =  164 bits (414), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 67/275 (24%), Positives = 109/275 (39%), Gaps = 22/275 (8%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET-- 59
           +  + +WNVN +RA        W   ++  ++ LQETK   +    +  +   +      
Sbjct: 2   LFKLVSWNVNGLRAVSAKADWDWFAHSDAQVVALQETKAHPEQLDEDVREPAGWESRWAS 61

Query: 60  -CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN- 117
              +K Y+GVA+ S+   +     LP  +   + R +   +          N Y P+G  
Sbjct: 62  STVKKGYSGVAVFSRVPFLSWSAELPQPEFQGEGRLLHLEYP----DFHFFNGYFPNGGA 117

Query: 118 --------PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
                   P  + K               ++     +P++  GD+NI  +P D   P   
Sbjct: 118 EELDENGKPTGNFKRVPYKMAYFEAFLAYAEECRKSKPIVVCGDFNIAHRPIDLARPKPN 177

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIML 228
           E    F  E R    +   +G+ D  R  H D    YS+W Y   + +KN G RID+  +
Sbjct: 178 EKCTGFLPEERAFLDRFTALGYVDTFRHVHGDAPDNYSWWSYKTRARAKNVGWRIDYFFV 237

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           S E    +  A I+    G    SDH PV +SL+I
Sbjct: 238 SQELAPAIRDAWIENDVYG----SDHCPVGLSLEI 268


>gi|149033629|gb|EDL88427.1| apurinic/apyrimidinic endonuclease 1, isoform CRA_b [Rattus
           norvegicus]
          Length = 294

 Score =  164 bits (414), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 66/269 (24%), Positives = 112/269 (41%), Gaps = 40/269 (14%)

Query: 2   SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN----YH 56
           + + + +WNV+ +RA I      W+KE  PDI+CLQETK  +   P E  +       Y 
Sbjct: 59  ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLTHQYW 118

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                ++ Y+GV +LS+  P+++   +       +            +  R         
Sbjct: 119 SAPSDKEGYSGVGLLSRQCPLKVSYGIAYVPNAGRGLVRLEYRQRWDEAFR--------- 169

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
                                  + L   +PL+  GD N+  +  D  NP   + +A FT
Sbjct: 170 --------------------KFLKDLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 209

Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E +   + LQ +   D+ R  +    + Y+FW Y  ++ SKN G R+D+ +LS     
Sbjct: 210 PQERQGFGEMLQAVPLADSFRHLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLP 269

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            L  ++I +K  G    SDH P+ + L +
Sbjct: 270 ALCDSKIRSKALG----SDHCPITLYLAL 294


>gi|12247526|gb|AAG49922.1|AF311054_1 APEX [Rattus norvegicus]
          Length = 289

 Score =  164 bits (414), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 66/269 (24%), Positives = 112/269 (41%), Gaps = 40/269 (14%)

Query: 2   SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN----YH 56
           + + + +WNV+ +RA I      W+KE  PDI+CLQETK  +   P E  +       Y 
Sbjct: 54  ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLTHQYW 113

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                ++ Y+GV +LS+  P+++   +       +            +  R         
Sbjct: 114 SAPSDKEGYSGVGLLSRQCPLKVSYGIAYVPNAGRGLVRLEYRQRWDEAFR--------- 164

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
                                  + L   +PL+  GD N+  +  D  NP   + +A FT
Sbjct: 165 --------------------KFLKDLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 204

Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             E +   + LQ +   D+ R  +    + Y+FW Y  ++ SKN G R+D+ +LS     
Sbjct: 205 PQERQGFGEMLQAVPLADSFRHLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLP 264

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            L  ++I +K  G    SDH P+ + L +
Sbjct: 265 ALCDSKIRSKALG----SDHCPITLYLAL 289


>gi|227497368|ref|ZP_03927600.1| possible exodeoxyribonuclease III [Actinomyces urogenitalis DSM
           15434]
 gi|226833239|gb|EEH65622.1| possible exodeoxyribonuclease III [Actinomyces urogenitalis DSM
           15434]
          Length = 274

 Score =  163 bits (413), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 50/275 (18%), Positives = 89/275 (32%), Gaps = 16/275 (5%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + +AT NVN IRA     +  W++ + PD++ LQE +  D+      L   +  I  C  
Sbjct: 1   MRIATVNVNGIRAAARKGMGTWLEASAPDVLLLQEVRA-DEETAAALLPGYSSLIWPCRI 59

Query: 63  KSYNGVAILSKYQPI------------EIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
           K   GV +  +                +           ++    +A        +    
Sbjct: 60  KGRAGVGVAVREGGPVRLGESRYGVAGQAEEPDVDSGRWLEVDLADADAQTVLTVVSAYL 119

Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170
                G      KY        R     +        ++ AGD N++    D  N     
Sbjct: 120 HSGQIGTEKMDQKYAHLELVDTRMGELLASAQAGGPQVVMAGDLNVVRSERDIKNWKPNH 179

Query: 171 NDACF--TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
           N        E+        +     A     +    Y++W     ++  + G RID+ + 
Sbjct: 180 NKVAGVLDEEIAHLEGWFASGWVDVARHLEPEAQGPYTWWSQRGKAFDNDAGWRIDYQVA 239

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +P       SA +D       + SDH P++V   +
Sbjct: 240 TPSLAGRAVSAVVDRAASYAEQWSDHAPLVVEYQL 274


>gi|257070188|ref|YP_003156443.1| exodeoxyribonuclease III Xth [Brachybacterium faecium DSM 4810]
 gi|256561006|gb|ACU86853.1| exodeoxyribonuclease III Xth [Brachybacterium faecium DSM 4810]
          Length = 308

 Score =  163 bits (413), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 60/308 (19%), Positives = 107/308 (34%), Gaps = 48/308 (15%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++ +AT N+N IRA        W+ E   D+I LQE + + +  P +     +  ++T  
Sbjct: 1   MLRIATANINGIRAAHRRGFGHWLAERGCDVIALQEVRAQAEKIPADAFGDHHVALDTGT 60

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDD--------------------------LDVQARFI 95
               NGVA+L++  P  + T                                     +  
Sbjct: 61  LPGRNGVAVLTREPPAAVRTWSGTALVGGPASGGPALAEVPASDHVPLTRGLGPFVDQGR 120

Query: 96  EATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL----------- 144
                +    L I +LYLP G      +  +++          ++++             
Sbjct: 121 YLEVDLADAPLTIASLYLPKGGLPAHLQRPERMREAPDGGARYARKMGFMAAFARHLTRT 180

Query: 145 -------EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA 197
                      +  GD NI     D       +N+  F  E R+      +      +  
Sbjct: 181 RRAAAAQGRQFLLMGDLNIAHTRQDLAAWRRNQNNDGFLPEEREWLGAQLSPRTLVDVVR 240

Query: 198 --THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHT 255
                    YS+W +   S++K+ G RID+ + +P        A +D + RG  + SDH 
Sbjct: 241 RLHPQEDGPYSWWSWLGQSFAKDAGWRIDYHLATPRLARSALRAEVDREVRG-VRLSDHA 299

Query: 256 PVIVSLDI 263
           PV+V  D+
Sbjct: 300 PVVVDYDL 307


>gi|13540877|ref|NP_110565.1| exonuclease III [Thermoplasma volcanium GSS1]
 gi|14324259|dbj|BAB59187.1| exodeoxyribonuclease [Thermoplasma volcanium GSS1]
          Length = 252

 Score =  163 bits (413), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 69/262 (26%), Positives = 114/262 (43%), Gaps = 18/262 (6%)

Query: 5   TVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG-- 61
              +WNVN +RA I       I+  +   I +QETK + K+ P E    L YH+      
Sbjct: 6   KFLSWNVNGLRAVIKSGGLDLIRNGDYFAIAMQETKVDVKSVPEEMYH-LGYHVYNNPAK 64

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G   LS+ +PI++      ++  +          +        N Y P+     +
Sbjct: 65  RKGYSGTMTLSREKPIDVSYGFESEEGRILN--------LEFDNFYFINAYFPNSQHGLT 116

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
               D      +     +  L  ++PLI  GD+N+  +  D   P   E++A FT+E R 
Sbjct: 117 RL--DLKLDFDKKFLGYANDLRKKKPLIICGDFNVAHEEIDIARPKDNEHNAGFTIEERT 174

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
              +  + G+ D  R        YS+W Y  ++  KN G RID+ ++S +    + ++RI
Sbjct: 175 WMSQFLSSGYVDTFRLFTTDGGHYSWWSYRFNAREKNIGWRIDYFVVSDDIKDKVKASRI 234

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
                   K SDH PV + +DI
Sbjct: 235 LENV----KGSDHAPVELEIDI 252


>gi|229586510|ref|YP_002845011.1| Exodeoxyribonuclease III [Rickettsia africae ESF-5]
 gi|228021560|gb|ACP53268.1| Exodeoxyribonuclease III [Rickettsia africae ESF-5]
          Length = 271

 Score =  163 bits (413), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 78/269 (28%), Positives = 123/269 (45%), Gaps = 7/269 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62
           + + TWN+NS+R RI  L     E+ PDII LQETK  D  FP E ++++ Y H+   GQ
Sbjct: 1   MKIVTWNINSLRLRIDLLRKLAYEHKPDIILLQETKVADSLFPLEVIKNIGYEHVIYSGQ 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           KSYNGVAI+SK+    + +    +        I     I+   +          +   +T
Sbjct: 61  KSYNGVAIISKFPLNNVFSLELYNSDKRHIAAIVNDIEIHNFYV---PAGGDIPDIEVNT 117

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           K+  K+ +++    + +      + +I  GD NI P  HD ++     N    T   R  
Sbjct: 118 KFKHKLEYVRLMQEWLTTNRTKNDKMIIVGDLNIAPHEHDVWSSKQLRNVISHTDIERSL 177

Query: 183 FQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLLHSA 239
             +LQN       +          Y++W Y    W K N+G R+DHI +S      L S 
Sbjct: 178 LVELQNALGFIDSSRHFVSLDEKFYTWWSYRNIDWKKSNRGRRLDHIWVSDNLKGALFSM 237

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268
            + ++ R W+ PSDH P  V+ ++    +
Sbjct: 238 HLLSEARDWSSPSDHVPYFVTFNLQMSSR 266


>gi|218665721|ref|YP_002424683.1| exodeoxyribonuclease III [Acidithiobacillus ferrooxidans ATCC
           23270]
 gi|218517934|gb|ACK78520.1| exodeoxyribonuclease III [Acidithiobacillus ferrooxidans ATCC
           23270]
          Length = 253

 Score =  163 bits (413), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 62/262 (23%), Positives = 94/262 (35%), Gaps = 12/262 (4%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETC 60
           + + +WNVN  RA     L  W+     D +C QE K +    P        Y       
Sbjct: 1   MRLYSWNVNGWRAACRKGLREWVATVQADALCFQEIKADPDRLPATETALDGYDARWAVA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +  Y+GVA  S+     + T L     D + R +                         
Sbjct: 61  ERPGYSGVATFSRAPCRPLTTGLGIPRFDREGRVVVTDCGDFDLY-----NVYFPNGKKD 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
           + +   K+ +   FL   + R+     ++F GD N   Q  D   P      + F  E R
Sbjct: 116 TERLAFKLDFYAAFLELINARVAAGRAVVFCGDVNTAHQAIDLARPKENARISGFLPEER 175

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
               +    G+ D+ R  H     YS+W    D+ ++N G R+D+  +       L  A 
Sbjct: 176 ACLDQWAAAGWVDSFRHLHPDAVEYSWWSQRTDARARNIGWRLDYFWIHESLLPRLRGAG 235

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I T   G    SDH PV + LD
Sbjct: 236 IATDVTG----SDHCPVWLELD 253


>gi|94309094|ref|YP_582304.1| exodeoxyribonuclease III (xth) [Cupriavidus metallidurans CH34]
 gi|93352946|gb|ABF07035.1| Exodeoxyribonuclease III [Cupriavidus metallidurans CH34]
          Length = 258

 Score =  163 bits (413), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 57/266 (21%), Positives = 115/266 (43%), Gaps = 13/266 (4%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IET 59
           ++ + + N+N IR+        W+ +   D++C+QE K ++ +     L    YH     
Sbjct: 1   MLRIISANLNGIRSASKKGFFEWMGKQEADMVCVQELKAQEADMTEAFLAPHGYHGYFHY 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GV + ++++P  ++      + D + R++E    +    L + ++Y+P G+  
Sbjct: 61  AEKKGYSGVGLYTRHKPERVIIGFGNTEFDAEGRYVE----VQYPHLAVISVYVPSGSSS 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +   K  +++ FL    +       ++  GD NI  +  D  N      ++ F  E 
Sbjct: 117 EERQQA-KFRFMEAFLPHLLELKASGREIVLCGDVNIAHKEIDIKNWKGNLKNSGFLPEE 175

Query: 180 RQSFQK-LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R    +   N G+ D  R        Y++W     +++KN G RID+ + + +  +   +
Sbjct: 176 RAWIGELFDNHGYVDVFRQLDPRPEQYTWWSNRGQAYAKNVGWRIDYHLTTAKIAATAKA 235

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIP 264
             I        K SDH P+ +  D P
Sbjct: 236 TSIYKD----EKFSDHAPLSIDYDFP 257


>gi|28572478|ref|NP_789258.1| exodeoxyribonuclease III [Tropheryma whipplei TW08/27]
 gi|28410610|emb|CAD66996.1| exodeoxyribonuclease III [Tropheryma whipplei TW08/27]
          Length = 279

 Score =  163 bits (413), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 77/281 (27%), Positives = 124/281 (44%), Gaps = 14/281 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V TWNVNSIRAR+  + AW+K    D+  LQETK    +FP +  +   Y+ E  G +
Sbjct: 1   MRVGTWNVNSIRARLERVLAWLKNECIDVAALQETKVRTGDFPVDAFRDAGYYSEAHGLR 60

Query: 64  SYNGVAILSKYQPIEIV------THLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
            + GVAI+S++    +            D             +  T  +R+ +LY+P+G 
Sbjct: 61  GFEGVAIVSRFPIRRVTVNIPRAPGFLSDRWGTDIPQEARAISATTGGIRLYSLYVPNGR 120

Query: 118 PITSTKYDDKISWIKRFLRFASQRLE--LEEPLIFAGDYNIIPQPHDCY-NPIIWENDAC 174
            + S  ++ K++W+K         L      PL+  GD+NI+    D         ND  
Sbjct: 121 EVGSPHFEYKLAWLKALASHVRTVLRRTPGIPLMLVGDFNIVTCEQDTADPDFQLPNDIT 180

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
            +   R++FQ + + G  D IR        ++ W Y    +  N+G+RID ++ S     
Sbjct: 181 CSGPEREAFQAILDTGMFDLIRPFAPIG--FTSWSYQRQRFQNNQGLRIDFMLGSDSVQR 238

Query: 235 LLHSARIDTKPRG---WTKPSDHTPVIVSLDIPEPRKKQQD 272
                 ID   R       PSDH P++  +D P    ++ D
Sbjct: 239 RTIWGEIDRVQRRHLFGLTPSDHAPLVSVIDPPRRTFRRDD 279


>gi|167957331|ref|ZP_02544405.1| exonuclease III [candidate division TM7 single-cell isolate TM7c]
          Length = 265

 Score =  163 bits (413), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 71/270 (26%), Positives = 110/270 (40%), Gaps = 15/270 (5%)

Query: 4   VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + +WNVN IRA I       +I E  PDI+CLQETK +      + L        +  
Sbjct: 1   MRLYSWNVNGIRAVIKKGTFLPFISEYQPDILCLQETKAKKNQVEID-LPDYFEIWNSAE 59

Query: 62  QKSYNGVAILSKYQPIEIV--------THLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
           +  Y+G AI SK +P+                D  D      E           I     
Sbjct: 60  RAGYSGTAIFSKAKPLNTWLDFPEDIVKKYNLDQDDYGNPNNEGRIIAAEFDNFIVATVY 119

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
              +    ++   +     +      ++LE  +P++F GD N+     D  NP       
Sbjct: 120 TPNSKGDLSRLQLRHQKWDKAWLEYMKKLESIKPVLFCGDLNVAHTEDDLANPKPNIGKH 179

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
            FT E R  F      GF D  R     +  YS+W ++A++ ++N G RID+ + S +  
Sbjct: 180 GFTNEERAGFDAFIQSGFKDTFRIFTKGNGYYSWWTHWANARARNIGWRIDYWLASEKLA 239

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           + +  A+I     G    SDH PV V++DI
Sbjct: 240 NKITEAQIHPDIMG----SDHCPVSVTIDI 265


>gi|198282493|ref|YP_002218814.1| exodeoxyribonuclease III Xth [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|198247014|gb|ACH82607.1| exodeoxyribonuclease III Xth [Acidithiobacillus ferrooxidans ATCC
           53993]
          Length = 255

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 66/262 (25%), Positives = 101/262 (38%), Gaps = 12/262 (4%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETC 60
           + + +WNVN  RA     L  W+     D +C QE K +    P        Y       
Sbjct: 3   MRLYSWNVNGWRAACRKGLREWVATVQADALCFQEIKADPDRLPATETALDGYDARWAVA 62

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +  Y+GVA  S+     + T L     D + R +            + N+Y P+G    
Sbjct: 63  ERPGYSGVATFSRAPCRPLTTGLGIPRFDREGRVVVTDCG----DFDLYNVYFPNGK-KD 117

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
           + +   K+ +   FL   + R+     ++F GD N   Q  D   P      + F  E R
Sbjct: 118 TERLAFKLDFYAAFLELINARVAAGRAVVFCGDVNTAHQAIDLARPKENARISGFLPEER 177

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
               +    G+ D+ R  H     YS+W    D+ ++N G R+D+  +       L  A 
Sbjct: 178 ACLDQWAAAGWVDSFRHLHPDAVEYSWWSQRTDARARNIGWRLDYFWIHESLLPRLRGAG 237

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I T   G    SDH PV + LD
Sbjct: 238 IATDVTG----SDHCPVWLELD 255


>gi|189183086|ref|YP_001936871.1| exodeoxyribonuclease III [Orientia tsutsugamushi str. Ikeda]
 gi|189183300|ref|YP_001937085.1| exodeoxyribonuclease III [Orientia tsutsugamushi str. Ikeda]
 gi|189179857|dbj|BAG39637.1| exodeoxyribonuclease III [Orientia tsutsugamushi str. Ikeda]
 gi|189180071|dbj|BAG39851.1| exodeoxyribonuclease III [Orientia tsutsugamushi str. Ikeda]
          Length = 261

 Score =  163 bits (412), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 80/263 (30%), Positives = 115/263 (43%), Gaps = 7/263 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62
           + + TWN+NSIR RI  L   +   NPDII LQETK EDK FP     +L Y +I   GQ
Sbjct: 1   MKIITWNINSIRIRIPLLQKLVHLYNPDIIALQETKVEDKLFPVTECINLGYKYITYSGQ 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           KSYNGVAILS+            +D            +I+   +          +   + 
Sbjct: 61  KSYNGVAILSRISFESTFAINLYNDEKRHIAINIGELSIHNFYV---PSGGDIPDANVNI 117

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           K+  K+ ++     +       ++ +I  GD NI P   D ++     N    T   R+ 
Sbjct: 118 KFKHKLCYVDFMNAWFLNNKSKKDKIILLGDLNIAPLESDVWSSYQLRNVVSHTDIERKK 177

Query: 183 FQKLQ--NMGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLLHSA 239
                            +     LYS+W Y    WSK ++G R+DHI +S    S + S 
Sbjct: 178 LMHNITSFDWIDAVRFFSGKHEKLYSWWSYRNVDWSKSDRGRRLDHIWISHHLESKIKSC 237

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
            I    RGW  PSDH PV++ ++
Sbjct: 238 IIIKDARGWDMPSDHVPVMLEIE 260


>gi|189238676|ref|XP_969559.2| PREDICTED: similar to ap endonuclease [Tribolium castaneum]
          Length = 1246

 Score =  163 bits (412), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 62/262 (23%), Positives = 106/262 (40%), Gaps = 14/262 (5%)

Query: 6    VATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64
            + TWNV+ +R+ +       +K + PDI+C+QETK      P E      Y    C    
Sbjct: 995  ITTWNVDGLRSWLKKGCLDILKYDKPDILCIQETKCAVYKLPEEVKTIEGYETLWCCSDK 1054

Query: 65   --YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
              Y GV I+ K +P+ ++  +   + D + R I   +        +       G  + + 
Sbjct: 1055 DGYAGVGIMVKDKPLNVIYGIDSKEHDTEGRCITVEYETF---FVVNVYVPHAGRNLVTL 1111

Query: 123  KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                K            + L+ ++P+I  GD N+  +  D  NP    N A F++E R  
Sbjct: 1112 P---KRLDWNEQFEKFIKNLDSQKPVIICGDMNVAHKEIDLANPKTNTNSAGFSVEERDG 1168

Query: 183  FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
                   G+ D  R  +      Y+FW Y  ++   N G R+D+ ++S      +    I
Sbjct: 1169 MTAFLGNGYVDIYRHLYPEKEKAYTFWIYMRNARPNNVGWRLDYFLVSQRFVDNVCDNII 1228

Query: 242  DTKPRGWTKPSDHTPVIVSLDI 263
             +   G    SDH P+ + + I
Sbjct: 1229 HSDVMG----SDHCPLSLHIQI 1246


>gi|330843681|ref|XP_003293776.1| hypothetical protein DICPUDRAFT_9650 [Dictyostelium purpureum]
 gi|325075853|gb|EGC29694.1| hypothetical protein DICPUDRAFT_9650 [Dictyostelium purpureum]
          Length = 249

 Score =  163 bits (412), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 65/257 (25%), Positives = 116/257 (45%), Gaps = 11/257 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQ-SLNYHIETCG 61
           + V +WNV   R+ +    + ++ + NPDI+CLQETK +       ++     YH  +  
Sbjct: 1   LKVISWNVAGFRSVLTKGFSDYVVKENPDILCLQETKIKPTEVQKSSIPSGYEYHFVSAD 60

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           Q  ++G  +L+K +P+ +   +     D + R I A +        + N Y+P+      
Sbjct: 61  QAGHHGTGLLTKLKPLSLKFGIGIAKHDTEGRVITAEYD----DFYLVNTYIPNSGSRGL 116

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
              D +I       +     L+ ++P+++ GD N+     D  NP      A FT++ R 
Sbjct: 117 KNLDYRIKEWDVDFQKYLVELDKKKPVVWCGDLNVAHTEIDLKNPKTNTKSAGFTIQERT 176

Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           SF    N GF D+ R  +      ++FW Y   + +KN G R+D+ ++S      + +  
Sbjct: 177 SFGDFLNKGFIDSYRHYNPGKEGAFTFWTYMGGARAKNVGWRLDYFVVSKRYIDSIKTPF 236

Query: 241 IDTKPRGWTKPSDHTPV 257
           I +   G    SDH P+
Sbjct: 237 IRSTVMG----SDHCPI 249


>gi|255020174|ref|ZP_05292243.1| Exodeoxyribonuclease III [Acidithiobacillus caldus ATCC 51756]
 gi|254970316|gb|EET27809.1| Exodeoxyribonuclease III [Acidithiobacillus caldus ATCC 51756]
          Length = 253

 Score =  163 bits (412), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 62/262 (23%), Positives = 99/262 (37%), Gaps = 12/262 (4%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETC 60
           + + +WNVN  RA   H L  W+     D++C+QETK +      +  Q   +H      
Sbjct: 1   MRLYSWNVNGWRAVTRHGLREWVAATPMDVLCVQETKVQLAQLDPDEAQLPGFHSLWAEA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +  Y+GVA   +     +   L   D D + R +                         
Sbjct: 61  ERPGYSGVATFFRDPCTAVRAQLGRADFDAEGRVVVTDCGDFDLY-----NVYFPNGKKD 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
           + +   K+ +   FL   +  +     +IF GD N    P D   P      + F  E R
Sbjct: 116 AQRLAFKLDFYAFFLEQVTALVRRGRSVIFCGDVNTAHTPLDLARPEANRRVSGFLPEER 175

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
               + +  GF D+ R  H     YS+W   + +  ++ G R+D+  +       L  A 
Sbjct: 176 AWLDRWREAGFIDSFRHFHPEERRYSWWSLRSGARERDVGWRLDYFWVHESLLPRLKGAG 235

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I T+ RG     DH PV + LD
Sbjct: 236 IATEVRGA----DHCPVWLELD 253


>gi|229489432|ref|ZP_04383295.1| exodeoxyribonuclease III [Rhodococcus erythropolis SK121]
 gi|229323529|gb|EEN89287.1| exodeoxyribonuclease III [Rhodococcus erythropolis SK121]
          Length = 281

 Score =  163 bits (412), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 67/268 (25%), Positives = 112/268 (41%), Gaps = 15/268 (5%)

Query: 5   TVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNF--PFETLQSLNYHIETCG 61
           T+ + NVN +RA     +  W+++ + D ICLQET+  D       E      + + +  
Sbjct: 17  TITSVNVNGVRAAARKGMLDWLEKTSADFICLQETRASDDQLRETLEPALGKGWFLVSAE 76

Query: 62  Q--KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
              K  NGVA+LS+ +P  +      D+     R+IEA F      L + +LYLP G  +
Sbjct: 77  PSAKGRNGVAVLSRTEPDAVRIGHGDDEFLDAGRYIEADFA----DLTVASLYLPSGEAL 132

Query: 120 TSTKYD---DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
           T  + +      S+       A+     +  ++ +GD+NI     D  N    +  + F 
Sbjct: 133 TPKQEEKERFMASFAVHLASTAAAAEAADRHVVVSGDWNIAHTELDLKNWKTNKKSSGFL 192

Query: 177 LEVRQSFQ--KLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
            E R        ++  + D  R  H      YS+W Y   ++  + G RID+ + +    
Sbjct: 193 PEERAWMDLLFAEDSAWVDVFRTLHPGVDGPYSWWSYRGKAFDNDSGWRIDYQVATRGYA 252

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSL 261
                A ++       + SDH PV VS 
Sbjct: 253 ERAKVALVERAEAYDLRWSDHAPVTVSY 280


>gi|226467620|emb|CAX69686.1| APEX nuclease [Schistosoma japonicum]
          Length = 319

 Score =  163 bits (411), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 69/264 (26%), Positives = 105/264 (39%), Gaps = 13/264 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFET-LQSLNYHIETCG 61
           + + +WNVN IRA I      +IK+ N DI C+QETK      P E  L S      +  
Sbjct: 65  LKLVSWNVNGIRAVIKNGGMEYIKKENADIFCIQETKCPLHKIPSEAKLPSYQSFWSSAD 124

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +  Y G A+ SK  P ++   +     D + R I A F        +   Y+P+      
Sbjct: 125 KAGYAGTALFSKIAPKKVTYGIGRKVHDEEGRVITAEFD----RFYLVTAYVPNAGQ-GL 179

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            +   +            ++L+  +P+I  GD N+  +  D   P      A FT + R 
Sbjct: 180 ARLPYREKEWDPDFLEYLRKLDATKPVIVCGDLNVAHEEIDLARPDTNHKTAGFTDQERS 239

Query: 182 SFQK--LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
            F K                D    YSFW Y   +   N G R+D+ ++S    + +   
Sbjct: 240 GFTKLLSSANLIDTYRHFYPDRREAYSFWSYRTGARLINNGWRLDYFLVSQRILANVG-- 297

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
             D + R     SDH PV++ L I
Sbjct: 298 --DQEIRCGVTGSDHCPVVLYLHI 319


>gi|148284900|ref|YP_001248990.1| exodeoxyribonuclease III [Orientia tsutsugamushi str. Boryong]
 gi|148285144|ref|YP_001249234.1| exodeoxyribonuclease III [Orientia tsutsugamushi str. Boryong]
 gi|146740339|emb|CAM80757.1| exodeoxyribonuclease III [Orientia tsutsugamushi str. Boryong]
 gi|146740583|emb|CAM81209.1| exodeoxyribonuclease III [Orientia tsutsugamushi str. Boryong]
          Length = 261

 Score =  163 bits (411), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 80/263 (30%), Positives = 116/263 (44%), Gaps = 7/263 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62
           + + TWN+NSIR RIH L   +   NPDII LQETK ED+ FP     +L Y +I   GQ
Sbjct: 1   MKIITWNINSIRIRIHLLQKLVHLYNPDIIALQETKVEDRLFPVTECINLGYKYITYSGQ 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           KSYNGVAILS+            +D            +I+   +          +   + 
Sbjct: 61  KSYNGVAILSRISFESTFVINLYNDEKRHIAINIGELSIHNFYV---PAGGDIPDANVNI 117

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           K+  K+ ++     +       ++ +I  GD NI P   D ++     N    T   R+ 
Sbjct: 118 KFKHKLCYVDFMNAWFLNNKSKKDKIILLGDLNIAPLESDVWSSYQLRNVVSHTDIERKK 177

Query: 183 FQKLQ--NMGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLLHSA 239
                            +     LYS+W Y    WSK ++G R+DHI +S    S + S 
Sbjct: 178 LMHNITSFDWIDAVRFFSGKHEKLYSWWSYRNIDWSKSDRGRRLDHIWISHPLESKIKSC 237

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
            I    RGW  PSDH PV++ ++
Sbjct: 238 IIIKDARGWDMPSDHVPVMLEIE 260


>gi|291516724|emb|CBK70340.1| exodeoxyribonuclease III [Bifidobacterium longum subsp. longum F8]
          Length = 286

 Score =  163 bits (411), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 64/286 (22%), Positives = 104/286 (36%), Gaps = 26/286 (9%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI---- 57
            +T+ T NVN IRA     +  W  ++ PD+ C+QE +   ++          +      
Sbjct: 2   TITITTSNVNGIRAAKRKGIEDWAGKHAPDVWCMQEVRAPQEDVDS-IFGEFGFEYATAG 60

Query: 58  ------------ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR--FIEATFTINT 103
                       E C  K   GV +L+  +  +    LPG   DV +         T   
Sbjct: 61  KIASPSDLHSLNEVCRVKGRAGVGLLTDLEVTDKRYGLPGLGEDVDSGRWIETDVKTPQG 120

Query: 104 QTLRIGNLYLPHGNPIT----STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159
            T+ +  +Y+  GN         KY    + + R      +     +  +  GD+NI   
Sbjct: 121 YTITVACVYVHAGNTDDSTKMEQKYRFLDTMLTRMGELRDEAAHGGKQAVLCGDFNIAHT 180

Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSWSK 217
           P D  N    E  A F  E R    K  +      +  +   D    Y++W     ++  
Sbjct: 181 PLDIKNAKANEKHAGFLPEERAYVDKWLDEYEFVDVMRSLAGDIQGPYTWWSQRGRAFDN 240

Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           N G RID+   +PE         ID  P    + SDH P+ ++ D+
Sbjct: 241 NVGWRIDYQFATPELAETARGFVIDKAPTYELRWSDHAPLTITYDV 286


>gi|71275880|ref|ZP_00652163.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Xylella
           fastidiosa Dixon]
 gi|71901393|ref|ZP_00683486.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Xylella
           fastidiosa Ann-1]
 gi|170729372|ref|YP_001774805.1| DNA-(apurinic or apyrimidinic site) lyase [Xylella fastidiosa M12]
 gi|71163257|gb|EAO12976.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Xylella
           fastidiosa Dixon]
 gi|71728852|gb|EAO30990.1| AP endonuclease, family 1:Exodeoxyribonuclease III xth [Xylella
           fastidiosa Ann-1]
 gi|167964165|gb|ACA11175.1| DNA-(apurinic or apyrimidinic site) lyase [Xylella fastidiosa M12]
          Length = 266

 Score =  163 bits (411), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 44/270 (16%), Positives = 82/270 (30%), Gaps = 18/270 (6%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + ++++N N +R+ +      W    + D++C+QETK +             YH+     
Sbjct: 1   MRISSFNANGLRSALSKGFFGWFSTQDIDVLCVQETKAQRHQLVGPDFFPAGYHVCFRDA 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
               G + ++ Y   E                             +   +          
Sbjct: 61  TIKKGYSGVAIYSRCEPDELRTTLGWAEFDEEGRYVEARFGNLSVV--SFYIPSGSSGEK 118

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +   K   ++       + L      +  GD+NI+    D  N    + ++      R  
Sbjct: 119 RQHYKFEVMRWLRPILCEWLLSGRDYVLCGDWNIVRSALDIRNWKSNQKNSGCLPLERDW 178

Query: 183 FQKLQNMG-----------FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
              L               + D  R  H     Y++W     +   N G RID+  +SP 
Sbjct: 179 LNGLCADSLHDVNSAQGRGWVDTYRVLHPQGEDYTWWSNRGAARVNNVGWRIDYQFVSPG 238

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
               +    I  + R     SDH+P  V  
Sbjct: 239 LRERVSRCAIYCEQR----FSDHSPYTVEY 264


>gi|319790980|ref|YP_004152620.1| exodeoxyribonuclease iii xth [Variovorax paradoxus EPS]
 gi|315593443|gb|ADU34509.1| exodeoxyribonuclease III Xth [Variovorax paradoxus EPS]
          Length = 267

 Score =  163 bits (411), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 63/270 (23%), Positives = 112/270 (41%), Gaps = 16/270 (5%)

Query: 3   VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFP--FETLQSLNYHIET 59
           +  + + N+N +R A    +A W+ E  PD IC+QE + +  +    FE +  L  H   
Sbjct: 1   MFKLTSLNLNGLRSAATKGVADWVAELAPDCICMQEIRVQASDIEGRFEEMAGLKGHFHF 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y G AI +K+ P +++      + D + R++E  F    +   + + Y P G+  
Sbjct: 61  AEKKGYAGTAIYTKHAPSQVIVGWGDAEFDAEGRYLELRFDTPKRKFSVISCYFPSGSSG 120

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +         +        L+ E   +  GD NI  Q  D  N    + ++ F  E 
Sbjct: 121 EERQLA--KFRFLKGFFPHLVALKKEREFVLCGDINIAHQQIDLKNWRSNQKNSGFLPEE 178

Query: 180 RQSFQKLQNMGFTD-------AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
           R    KL + G           +     T   Y++W     +++ N G R+D+ + +P+ 
Sbjct: 179 RAWMTKLLDAGAEGAGLVDVYRMLKPETTDEAYTWWSNRGQAYANNVGWRLDYHLATPKT 238

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
            +L  + +I        K SDH P+ V  D
Sbjct: 239 AALARTEQIFKTI----KFSDHAPITVDYD 264


>gi|169837263|ref|ZP_02870451.1| exonuclease III [candidate division TM7 single-cell isolate TM7a]
          Length = 267

 Score =  163 bits (411), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 71/270 (26%), Positives = 110/270 (40%), Gaps = 15/270 (5%)

Query: 4   VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + +WNVN IRA I       +I E  PDI+CLQETK +      + L        +  
Sbjct: 3   MRLYSWNVNGIRAVIKKGTFLPFISEYQPDILCLQETKAKKNQVEID-LPDYFEIWNSAE 61

Query: 62  QKSYNGVAILSKYQPIEIV--------THLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
           +  Y+G AI SK +P+                D  D      E           I     
Sbjct: 62  RAGYSGTAIFSKAKPLNTWLDFPEDIVKKYNLDQDDYGNPNNEGRIIAAEFDNFIVATVY 121

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
              +    ++   +     +      ++LE  +P++F GD N+     D  NP       
Sbjct: 122 TPNSKGDLSRLQLRHQKWDKAWLEYMKKLESIKPVLFCGDLNVAHTEDDLANPKPNIGKH 181

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
            FT E R  F      GF D  R     +  YS+W ++A++ ++N G RID+ + S +  
Sbjct: 182 GFTNEERAGFDAFIQSGFKDTFRIFTKGNGYYSWWTHWANARARNIGWRIDYWLASEKLA 241

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           + +  A+I     G    SDH PV V++DI
Sbjct: 242 NKITEAQIHPDIMG----SDHCPVSVTIDI 267


>gi|305680645|ref|ZP_07403453.1| putative exodeoxyribonuclease III [Corynebacterium matruchotii ATCC
           14266]
 gi|305660176|gb|EFM49675.1| putative exodeoxyribonuclease III [Corynebacterium matruchotii ATCC
           14266]
          Length = 298

 Score =  163 bits (411), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 79/273 (28%), Positives = 119/273 (43%), Gaps = 20/273 (7%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A WNVNS+R R+  + A +   + D++ +QETK +DK FPF+      Y I   G  
Sbjct: 1   MRIANWNVNSVRTRVDRIVAALARLDIDVLLVQETKCKDKQFPFDAFP--GYEIAHHGLN 58

Query: 64  SYNGVAILSKYQPIEIVTHLPGDD-----LDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
            +NGVAILS+    +I T  P                    + +   +R+ +LY+P+G  
Sbjct: 59  QWNGVAILSRVGLADIQTSFPHQPGFAKDPKKPQNLEARAISADCGGVRVWSLYVPNGRA 118

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLI-----FAGDYNIIPQPHDCYNPIIWENDA 173
           I    YD K+ W+    R    +    E          GD+NI P   + ++   + +  
Sbjct: 119 IADRHYDYKLRWLDALARHVEDQAGDPEQPSSQPLVLGGDFNIAPTDANVWDITAFIDHT 178

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
             T   RQ+F  L   G T     +      YS+WDY A  + KN+G+ ID  +      
Sbjct: 179 HVTEAERQAFAGLIEAGLTVTSPTSG-----YSYWDYKAGRFPKNEGMLIDFQLA-RGL- 231

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEP 266
                + ID   R  T  SDH PV+V  D   P
Sbjct: 232 -HATGSFIDVAERSGTGASDHAPVVVDYDYDAP 263


>gi|226953375|ref|ZP_03823839.1| exodeoxyribonuclease III [Acinetobacter sp. ATCC 27244]
 gi|226835913|gb|EEH68296.1| exodeoxyribonuclease III [Acinetobacter sp. ATCC 27244]
          Length = 274

 Score =  163 bits (411), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 62/267 (23%), Positives = 111/267 (41%), Gaps = 7/267 (2%)

Query: 2   SVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIET 59
            ++ V + NVN +RA +   L  W+++++ D++C+QE++   + +  +      Y H+  
Sbjct: 12  KILRVVSINVNGLRASVTKGLLEWLEQSDADVVCMQESRITHEQWTDKFKPEGWYTHLFP 71

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +  Y G AI S+   + +   L  +  D Q RFI A F +                  
Sbjct: 72  AERAGYAGTAIYSRLPFVSVTNGLGFELADSQGRFITAEFDLGLSHPVHIASLYLPSGSS 131

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-E 178
                  K  +++ + +   Q  +  + +I  GDYNI+ +  D  N    +  +     E
Sbjct: 132 GDEAQARKDIFLEEYAKILKQWRDENKSIIVCGDYNIVHKRIDIKNWSGNQKSSGVLPHE 191

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
                     +G+ D  R       LYS+W     + +KN G RID+   SP+  +   +
Sbjct: 192 RAWLDHIYDELGYVDTFREVRPEAELYSWWSNRGQARAKNVGWRIDYHACSPDWKARTAN 251

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           A +  +       SDH PVI+   I E
Sbjct: 252 AWVYKE----QWFSDHAPVIIDYKIHE 274


>gi|23465951|ref|NP_696554.1| exodeoxyribonuclease [Bifidobacterium longum NCC2705]
 gi|322689435|ref|YP_004209169.1| exodeoxyribonuclease [Bifidobacterium longum subsp. infantis 157F]
 gi|322691402|ref|YP_004220972.1| exodeoxyribonuclease [Bifidobacterium longum subsp. longum JCM
           1217]
 gi|23326663|gb|AAN25190.1| possible exodeoxyribonuclease [Bifidobacterium longum NCC2705]
 gi|320456258|dbj|BAJ66880.1| putative exodeoxyribonuclease [Bifidobacterium longum subsp. longum
           JCM 1217]
 gi|320460771|dbj|BAJ71391.1| putative exodeoxyribonuclease [Bifidobacterium longum subsp.
           infantis 157F]
          Length = 286

 Score =  163 bits (411), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 64/286 (22%), Positives = 104/286 (36%), Gaps = 26/286 (9%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI---- 57
            +T+ T NVN IRA     +  W  ++ PD+ C+QE +   ++          +      
Sbjct: 2   TITITTSNVNGIRAAKRKGIEDWAGKHAPDVWCMQEVRAPQEDVDS-IFGEFGFEYATAG 60

Query: 58  ------------ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR--FIEATFTINT 103
                       E C  K   GV +L+  +  +    LPG   DV +         T   
Sbjct: 61  KIASPSDLHSLNEVCRVKGRAGVGLLTDLEVTDKRYGLPGLSEDVDSGRWIETDVKTPQG 120

Query: 104 QTLRIGNLYLPHGNPIT----STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159
            T+ +  +Y+  GN         KY    + + R      +     +  +  GD+NI   
Sbjct: 121 YTITVACVYVHAGNTDDSTKMEQKYRFLDTMLTRMGELRDEAAHGGKQAVLCGDFNIAHT 180

Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSWSK 217
           P D  N    E  A F  E R    K  +      +  +   D    Y++W     ++  
Sbjct: 181 PLDIKNAKANEKHAGFLPEERAYVDKWLDEYEFVDVMRSLAGDIQGPYTWWSQRGRAFDN 240

Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           N G RID+   +PE         ID  P    + SDH P+ ++ D+
Sbjct: 241 NVGWRIDYQFATPELAETARGFVIDKAPTYELRWSDHAPLTITYDV 286


>gi|224827230|ref|ZP_03700324.1| exodeoxyribonuclease III Xth [Lutiella nitroferrum 2002]
 gi|224600519|gb|EEG06708.1| exodeoxyribonuclease III Xth [Lutiella nitroferrum 2002]
          Length = 258

 Score =  163 bits (411), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 59/264 (22%), Positives = 114/264 (43%), Gaps = 13/264 (4%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFP--FETLQSLNYHIET 59
           ++ + + N+N +R+        W+  +  D++C+QE K +  +     +    L  +   
Sbjct: 1   MLRIVSANLNGVRSADKKGFFDWLAGSQADLVCVQELKAQPGDLSPRMQAPDGLTGYFHC 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GV I S+++P  +V  L    +D + R+++  F      L + +LYLP G+  
Sbjct: 61  AEKKGYSGVGIYSRHEPDAVVEGLGIGWIDAEGRYLQLDFG----ELSVVSLYLPSGSSS 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +          F+   ++       ++  GD+NI     D  N      ++ F  E 
Sbjct: 117 DERQQVKFDFLDV-FMPHLNELRAAGRDIVICGDWNIAHNEIDLKNWKGNLKNSGFLPEE 175

Query: 180 RQSFQKL-QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R    +L    G+ D  R  +     Y++W     +++K+ G RID+ +++P       +
Sbjct: 176 RAWMGELLGEGGWHDVWRRLYPEVPGYTWWSNRGQAYAKDVGWRIDYHIVTPSMMECARA 235

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
           A +        K SDH P+IV  D
Sbjct: 236 ASVYKD----EKFSDHAPLIVDYD 255


>gi|221120309|ref|XP_002161039.1| PREDICTED: similar to APEX nuclease (multifunctional DNA repair
           enzyme) 1 [Hydra magnipapillata]
          Length = 384

 Score =  163 bits (411), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 72/277 (25%), Positives = 129/277 (46%), Gaps = 25/277 (9%)

Query: 2   SVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQ--------- 51
           S + + +WNV  ++A +  N   ++ + +PD++CLQETK  + + P + LQ         
Sbjct: 118 STLKICSWNVAGLKAWVNKNGLNYVIKEDPDVLCLQETKCTENDLPGQVLQMKNGPKVTN 177

Query: 52  --SLNYHIETCG--QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107
             +  Y++  C   +K Y+GV++  K +P+++   L   + D + R I A F        
Sbjct: 178 VSNSGYYMYWCNAEKKGYSGVSLWCKLKPLKVTYGLGIKEHDSEGRLITAEFEKYYI--- 234

Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167
           I       G  +    Y    +   +        L+ ++P+I  GD+N+     D  NP 
Sbjct: 235 ITTYVPNSGQKLIRLDYRRIWNTDYKNYVGE---LKKKKPVIMCGDFNVAHTEIDIANPN 291

Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHI 226
             + +A FT E R  F  L   G+ D  R  +      Y+FW Y  ++ SKNKG R+D+ 
Sbjct: 292 SNKRNAGFTEEERSDFTALLEDGYIDTFRKLNPEKTGAYTFWTYMMNARSKNKGWRLDYF 351

Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +++ +    +  + I +   G    SDH P++++L I
Sbjct: 352 IVTKDIEDDICDSVIRSSVMG----SDHCPIVLNLAI 384


>gi|308274119|emb|CBX30718.1| Exodeoxyribonuclease [uncultured Desulfobacterium sp.]
          Length = 263

 Score =  162 bits (410), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 69/267 (25%), Positives = 115/267 (43%), Gaps = 15/267 (5%)

Query: 2   SVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFET--LQSLN-YHI 57
            ++ + +WNVN +RA I  +    I+  NPDI+ +QETK ++     +    +  N Y  
Sbjct: 5   KLIKLVSWNVNGLRAIIQKDFFGSIQRMNPDIVAIQETKLQEHQRTDKMLSFEDYNSYWS 64

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
            +  +K Y+GVA  ++  P  +   +     D + R +E  F          N+Y P+G 
Sbjct: 65  YSTVKKGYSGVATFTRIAPQNVKEGIGNPGYDEEGRILETDFG----DFIFFNVYFPNGQ 120

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
                +   K+++   F  +        + LI +GDYN      D  +P   E  + F  
Sbjct: 121 M-GDDRLQYKLNFYNDFFAYTDSLKNQGKNLIISGDYNTAHNEIDLTHPKPNEKYSGFLR 179

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL-- 235
             R    ++   G+ D  R  +     YS+W Y A++  KN G R+D+I +S        
Sbjct: 180 VERDWMDEIIKRGYVDTFRYFYPEKVKYSWWSYRANARKKNVGWRVDYIFVSRNIIDKGW 239

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262
           +    ID    G    SDH PV + L+
Sbjct: 240 VKEPFIDNDIFG----SDHCPVGLVLE 262


>gi|225022084|ref|ZP_03711276.1| hypothetical protein CORMATOL_02117 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224945017|gb|EEG26226.1| hypothetical protein CORMATOL_02117 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 298

 Score =  162 bits (410), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 79/273 (28%), Positives = 119/273 (43%), Gaps = 20/273 (7%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A WNVNS+R R+  + A +   + D++ +QETK +DK FPF+      Y I   G  
Sbjct: 1   MRIANWNVNSVRTRVDRIVAALARLDIDVLLVQETKCKDKQFPFDAFP--GYEIAHHGLN 58

Query: 64  SYNGVAILSKYQPIEIVTHLPGDD-----LDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
            +NGVAILS+    +I T  P                    + +   +R+ +LY+P+G  
Sbjct: 59  QWNGVAILSRVGLADIQTSFPHQPGFAKDPRKPQNLEARAISADCGGVRVWSLYVPNGRA 118

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLI-----FAGDYNIIPQPHDCYNPIIWENDA 173
           I    YD K+ W+    R    +    E          GD+NI P   + ++   + +  
Sbjct: 119 IADRHYDYKLRWLDALARHVEDQAGDPEQPSSQPLVLGGDFNIAPTDANVWDITEFIDHT 178

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
             T   RQ+F  L   G T     +      YS+WDY A  + KN+G+ ID  +      
Sbjct: 179 HVTEAERQAFAGLIEAGLTVTSPTSG-----YSYWDYKAGRFPKNEGMLIDFQLA-RGL- 231

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEP 266
                + ID   R  T  SDH PV+V  D   P
Sbjct: 232 -HATGSFIDVAERSGTGASDHAPVVVDYDYDAP 263


>gi|288959479|ref|YP_003449820.1| exodeoxyribonuclease III [Azospirillum sp. B510]
 gi|288911787|dbj|BAI73276.1| exodeoxyribonuclease III [Azospirillum sp. B510]
          Length = 264

 Score =  162 bits (410), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 80/265 (30%), Positives = 118/265 (44%), Gaps = 6/265 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62
           + +ATWN+NS+R R+  L   ++E  PD+ICLQETK  D +FP   L    Y H    G 
Sbjct: 1   MRIATWNINSVRMRLDLLLRLMEEERPDVICLQETKVVDADFPLAPLAERGYVHAHIHGM 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           KSYNGVAILS+               D +         I    + I        +P  + 
Sbjct: 61  KSYNGVAILSRLPFSSHDVQHWCGKQDCRHALARLPGGIELHCVYIPAG-GDIPDPAVND 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ- 181
           K+  K+ ++    R+       + P++  GD NI P   D ++     +    T    + 
Sbjct: 120 KFAHKLQFLDEMTRWLGTERTPDRPMVLVGDLNIAPLEQDVWSHKELLSVVSHTPVEVER 179

Query: 182 -SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLLHSA 239
            +  +          R       LY++W Y A  W + N+G R+DHI ++P     L   
Sbjct: 180 LAAMQASAGWIDAMRRFVPPEEKLYTWWSYRAKDWAASNRGRRLDHIWVTPPLEGALAGI 239

Query: 240 RIDTKPRGWT-KPSDHTPVIVSLDI 263
           ++    RGW  KPSDH PVIV LD+
Sbjct: 240 KVLRDARGWDPKPSDHVPVIVDLDV 264


>gi|157737072|ref|YP_001489755.1| exodeoxyribonuclease [Arcobacter butzleri RM4018]
 gi|157698926|gb|ABV67086.1| exodeoxyribonuclease [Arcobacter butzleri RM4018]
          Length = 262

 Score =  162 bits (410), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 63/262 (24%), Positives = 103/262 (39%), Gaps = 8/262 (3%)

Query: 5   TVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETL-QSLNYHIETCGQ 62
              +WNVN IRA    +   WI E   D++ +QETK+     P     +       +   
Sbjct: 6   KFISWNVNGIRAVDKKDALKWIDEIEVDLLGVQETKSMKDQIPKTIFSKEFKTLFASASA 65

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
                   L         +     D+  + R  E  F +  + +   N+Y P+G   +  
Sbjct: 66  IKGRSGTALFSDIEPTFQSICESVDILDEGRINEVHFNLADKNIAFFNVYFPNGQ-SSQE 124

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           + D K+ +  RFL       +  + +I  GD N      D   P   EN + F    R  
Sbjct: 125 RLDYKMEFYDRFLNHCENLKKDGKSIIVCGDVNTAHTEIDIARPKANENTSGFLQMERDW 184

Query: 183 FQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             K  + G+ D  R  + D    YS+W Y A++ + N G RID+  +S +    +  A I
Sbjct: 185 ITKFLSHGYIDTFRLINGDIKDKYSWWSYRANARANNVGWRIDYFYVSSDLKDYVKDAYI 244

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
                G    SDH P+ + +++
Sbjct: 245 LDNIEG----SDHCPIGLEMEL 262


>gi|328870805|gb|EGG19178.1| transcription factor IIIC-gamma subunit [Dictyostelium
           fasciculatum]
          Length = 1238

 Score =  162 bits (410), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 67/267 (25%), Positives = 113/267 (42%), Gaps = 10/267 (3%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPF-ETLQSLNYHIETCG 61
           + + +WNV    A        ++ +  PDI+CLQETK      P  E  +   YH   C 
Sbjct: 115 IKIVSWNVAGFGACTKKGFKDYLIKEQPDIVCLQETKIAVAKVPKSEIPEGYTYHFNPCI 174

Query: 62  QKS-YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           +K+ ++G A+L+K +PI I + +     D + R + A F  +   +              
Sbjct: 175 EKTGHHGTALLTKIKPISITSGIGISKHDQEGRVVTAEFE-DFYVVNAYVPNSGVDRKEP 233

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   +              L  ++P+++ GD N+     D  NP      A FT+E R
Sbjct: 234 LKRLGYRTKEWDVDFFKYMSDLNTKKPVVWCGDLNVAHTEIDLANPKSNSRTAGFTIEER 293

Query: 181 QSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
            SF    N GF D  R  +      Y+FW Y   + +KN G R+D+ ++       + ++
Sbjct: 294 TSFSGHLNSGFIDTHRHFNPGKTGTYTFWSYMGGARAKNAGWRLDYFIVPATFIGSIAAS 353

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEP 266
            I    R   + SDH P+ + +D+  P
Sbjct: 354 FI----RSKVQGSDHCPIGI-IDLENP 375


>gi|229821466|ref|YP_002882992.1| exodeoxyribonuclease III Xth [Beutenbergia cavernae DSM 12333]
 gi|229567379|gb|ACQ81230.1| exodeoxyribonuclease III Xth [Beutenbergia cavernae DSM 12333]
          Length = 269

 Score =  162 bits (410), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 55/267 (20%), Positives = 100/267 (37%), Gaps = 5/267 (1%)

Query: 2   SVVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
            V++VAT NVN IRA     +  W+ +  PD++ LQE +  D+       +  +      
Sbjct: 3   RVLSVATVNVNGIRAAYRRGMGEWLAKREPDVLLLQELRAPDETVHQLLGEGWHIAHAAS 62

Query: 61  GQKSYNGVAILSKYQPIEIVTH---LPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
             K   GVA+ S+     +         D+     R+IEA   +             H  
Sbjct: 63  DAKGRAGVAVASRLPVTAVRIGLGDGVTDEAIDTGRWIEADVQLPAGDTVTTASLYLHSA 122

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
            + +     K ++++R               + AGD N+  +  D  N       A F  
Sbjct: 123 TVGTPSLAAKYAYLERVTTRMGDLASRGGFAVVAGDVNVAHRELDIRNWKGNLRSAGFLP 182

Query: 178 EVR-QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
           E R    +   +     A     +    Y++W +   ++  + G RID+ + + +  +  
Sbjct: 183 EERGYLDRWFADGWVDVARAQAGEVDGPYTWWSWRGKAFDNDAGWRIDYQIATSDLAARA 242

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263
             A +D       + SDH P+ V+ D+
Sbjct: 243 VEAVVDRASSYAERFSDHAPLAVAYDL 269


>gi|157803480|ref|YP_001492029.1| exodeoxyribonuclease III [Rickettsia canadensis str. McKiel]
 gi|157784743|gb|ABV73244.1| exodeoxyribonuclease III [Rickettsia canadensis str. McKiel]
          Length = 273

 Score =  162 bits (410), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 76/274 (27%), Positives = 119/274 (43%), Gaps = 7/274 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62
           + + TWN+NS+R RI  L     E+ PDII LQETK  D  FP E ++++ Y HI   GQ
Sbjct: 1   MKIVTWNINSLRLRIDLLRKLAHEHKPDIILLQETKVADSLFPLEVIKNIGYEHIIYSGQ 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           KSYNGVAI+SK+    + +    +              ++   +          +   + 
Sbjct: 61  KSYNGVAIISKFPLNNVFSLELYNSDKRHIAATVNDIEVHNFYV---PAGGDIPDIEINL 117

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           K+  K+ +++    + +      + +I  GD NI P  HD ++     N    T   R  
Sbjct: 118 KFKHKLEYVRLMQEWLTVNRTKNDKIIIVGDLNIAPHEHDVWSSRQLRNVISHTDIERSL 177

Query: 183 FQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLLHSA 239
              LQN       +          Y++W Y    W K N+G R+DHI +S      L S 
Sbjct: 178 LVGLQNSLGFIDSSRHFISLDEKFYTWWSYRNIDWKKSNRGRRLDHIWVSNNLKDALFSI 237

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDS 273
            + ++ R W  PSDH P  V+ +      +  + 
Sbjct: 238 NLLSEARDWVPPSDHVPYFVNFNFDGVMPRACNR 271


>gi|319761098|ref|YP_004125035.1| exodeoxyribonuclease iii xth [Alicycliphilus denitrificans BC]
 gi|330822956|ref|YP_004386259.1| exodeoxyribonuclease III Xth [Alicycliphilus denitrificans K601]
 gi|317115659|gb|ADU98147.1| exodeoxyribonuclease III Xth [Alicycliphilus denitrificans BC]
 gi|329308328|gb|AEB82743.1| exodeoxyribonuclease III Xth [Alicycliphilus denitrificans K601]
          Length = 266

 Score =  162 bits (410), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 66/270 (24%), Positives = 113/270 (41%), Gaps = 15/270 (5%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTE--DKNFPFETLQSLNYHIET 59
           +  + + N+N IR+     + AWI +N PD IC+QE K +  D    FE L  L  H   
Sbjct: 1   MFKLTSLNLNGIRSATSKGVEAWIDQNRPDCICVQEIKAQSADMQGRFEELAGLRGHFHF 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GV I ++++P +++      + D + R++E  F   ++ L I + Y P G+  
Sbjct: 61  AAKKGYSGVGIYTRHEPSDVLAGYGSQEFDAEGRYMELRFDTPSRRLSIISAYFPSGSSG 120

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +                 RL+ E   I  GD NI  +  D  N    + ++ F  E 
Sbjct: 121 EERQLA--KYRFLDEFHPHLMRLKAEREFILCGDINIAHRQADLKNWRSNQKNSGFLPEE 178

Query: 180 RQSFQKLQNMGFTDAIRATHDT------HHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
           R    KL        +   +           Y++W     +++ N G R+D+ + +P   
Sbjct: 179 RAWMTKLLGDDTDGGLVDVYRRLQPDATDACYTWWSNRGQAYANNVGWRLDYHLATPALA 238

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            L  +  I        K SDH P+ V  ++
Sbjct: 239 QLARTEAIYK----GEKFSDHAPITVGYEM 264


>gi|189184130|ref|YP_001937915.1| exodeoxyribonuclease III [Orientia tsutsugamushi str. Ikeda]
 gi|189180901|dbj|BAG40681.1| exodeoxyribonuclease III [Orientia tsutsugamushi str. Ikeda]
          Length = 261

 Score =  162 bits (409), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 78/263 (29%), Positives = 115/263 (43%), Gaps = 7/263 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62
           + + TWN+NS+R RI  L   +   NPDII LQETK ED+ FP     +L Y +I   GQ
Sbjct: 1   MKIITWNINSVRMRIPLLQRLVHLYNPDIIALQETKVEDRLFPVTECINLGYKYITYSGQ 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           KSYNGVAILS+            +             +I+   +          N   + 
Sbjct: 61  KSYNGVAILSRISFESTFVINLYNGEKRHIAINIGELSIHNFYV---PAGGDIPNANVNI 117

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           K+  K+ ++     +       ++ +I  GD NI P   D ++     N   +T   R+ 
Sbjct: 118 KFKHKLCYVDFMNAWFLNNKSKKDKIILLGDLNIAPLESDVWSSYQLRNVVSYTDIERKK 177

Query: 183 FQKLQ--NMGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLLHSA 239
                            +     LYS+W Y    WSK ++G R+DHI +S    S + S 
Sbjct: 178 LMHNITSFDWIDAVRFFSGKHEKLYSWWSYRNVDWSKFDRGRRLDHIWISHPLESKIKSC 237

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
            I    RGW  PSDH PV++ ++
Sbjct: 238 IIIKDARGWDMPSDHVPVMLEIE 260


>gi|296090736|ref|NP_001171688.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Gallus gallus]
 gi|194722849|dbj|BAG66138.1| APEX nuclease [Gallus gallus]
          Length = 300

 Score =  162 bits (409), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 70/265 (26%), Positives = 124/265 (46%), Gaps = 16/265 (6%)

Query: 5   TVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQ----SLNYHIET 59
            V +WNV+ +RA +      W++   PD++CLQETK   ++ P E  Q       +    
Sbjct: 46  KVTSWNVDGLRAWVRKGGLQWLQSEAPDVVCLQETKCGAESIPSELSQLPHLPHKFWGSA 105

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            G+  Y+GV +LS+  PI +   +  ++ D + R + A F     ++ + + Y+P+    
Sbjct: 106 VGRSGYSGVGLLSRTAPIRVTHGIGIEEHDAEGRVLTAEFP----SVYVVSAYVPNSGRG 161

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
            +     +        +   QRL+ ++P++  GD N+  +  D  NP        FT E 
Sbjct: 162 LNRLQYRQRWDGA--FKSFLQRLDAQKPVVLCGDLNVAHREIDLRNPKSNRRSPGFTQEE 219

Query: 180 RQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R +F  L + GF D+ R  +    + Y+FW Y   +  +N G R+D+ +LS      L  
Sbjct: 220 RDAFGALLDGGFLDSFRLLYPDVPNAYTFWTYMGGARERNVGWRLDYFLLSTRLREALCD 279

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263
           ++I +   G    SDH P+ + L +
Sbjct: 280 SKIRSAAMG----SDHCPITLYLAL 300


>gi|312132556|ref|YP_003999895.1| xtha [Bifidobacterium longum subsp. longum BBMN68]
 gi|311773493|gb|ADQ02981.1| XthA [Bifidobacterium longum subsp. longum BBMN68]
          Length = 286

 Score =  162 bits (409), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 64/286 (22%), Positives = 105/286 (36%), Gaps = 26/286 (9%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI---- 57
            +T+ T NVN IRA     +  W  ++ PD+ C+QE +   ++          +      
Sbjct: 2   TITITTSNVNGIRAAKRKGIEDWAGKHAPDVWCMQEVRAPQEDVDS-IFGEFGFEYATAG 60

Query: 58  ------------ETCGQKSYNGVAILSKYQPIEIVTHLP--GDDLDVQARFIEATFTINT 103
                       E C  K   GV +L+  +  +    LP  G+D+D          T   
Sbjct: 61  KIASPSDLHSLNEVCRVKGRAGVGLLTDLEVTDKRYGLPSLGEDVDSGRWIETDVKTPQG 120

Query: 104 QTLRIGNLYLPHGNPIT----STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159
            T+ +  +Y+  GN         KY    + + R      +     +  +  GD+NI   
Sbjct: 121 YTITVACVYVHAGNTDDSTKMEQKYRFLDTMLTRMGELRDEAAHGGKQAVLCGDFNIAHT 180

Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSWSK 217
           P D  N    E  A F  E R    K  +      +  +   D    Y++W     ++  
Sbjct: 181 PLDIKNAKANEKHAGFLPEERAYVDKWLDEYEFVDVMRSLAGDIQGPYTWWSQRGRAFDN 240

Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           N G RID+   +PE         ID  P    + SDH P+ ++ D+
Sbjct: 241 NVGWRIDYQFATPELAETARGFVIDKAPTYELRWSDHAPLTITYDV 286


>gi|329945926|ref|ZP_08293613.1| putative exodeoxyribonuclease III [Actinomyces sp. oral taxon 170
           str. F0386]
 gi|328528374|gb|EGF55352.1| putative exodeoxyribonuclease III [Actinomyces sp. oral taxon 170
           str. F0386]
          Length = 277

 Score =  162 bits (409), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 50/277 (18%), Positives = 86/277 (31%), Gaps = 20/277 (7%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + +AT NVN IRA     +  W+  + PDI+ LQE +  D+    + L      I  C  
Sbjct: 1   MRIATVNVNGIRAAARKGMGEWLTASAPDILLLQEVRA-DERIAADLLPGYESAIWPCRI 59

Query: 63  KSYNGV---------------AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107
           K   GV                        E      G  L+                + 
Sbjct: 60  KGRAGVGVAVREGGPAGLGELRYGVAAPGTEEPDVDSGRWLEADLTLTGLDGLERLTIIS 119

Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167
                   G      KY        R     +        ++ AGD N++    D  +  
Sbjct: 120 AYLHSGQLGTEKMDQKYAHLELVDARMADLLAAARNSGPQVLMAGDLNVVRSERDIKSWK 179

Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRAT---HDTHHLYSFWDYYADSWSKNKGIRID 224
              N     ++   +  +                 +    Y++W     ++  N G RID
Sbjct: 180 PNHNKIAGVMDEEIAHLEGWFSSGWVDASRRLVGDEEQGPYTWWSQRGKAFDNNAGWRID 239

Query: 225 HIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           + +++P       S  +D  P   ++ SDH P+++  
Sbjct: 240 YQVITPALAERARSVAVDRAPDYASRWSDHAPLVIEY 276


>gi|302787589|ref|XP_002975564.1| hypothetical protein SELMODRAFT_103806 [Selaginella moellendorffii]
 gi|300156565|gb|EFJ23193.1| hypothetical protein SELMODRAFT_103806 [Selaginella moellendorffii]
          Length = 306

 Score =  162 bits (409), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 61/274 (22%), Positives = 112/274 (40%), Gaps = 25/274 (9%)

Query: 2   SVVTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFETLQ 51
           ++V V +WNVN +RA +            LA      + D++CLQETK ++K+      +
Sbjct: 36  NLVKVISWNVNGLRACMKRKNELEEEGSVLARLANSEDFDVLCLQETKLQEKDVEAIKQK 95

Query: 52  SLNYHIETCG-----QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
            L  +  +       +  Y+G A++S+ +P+ +   L     D + R + A F       
Sbjct: 96  ILGGYSNSFWTCSSSKLGYSGCALISRIKPVSVTYGLGISQHDGEGRVVTAEFDTF---F 152

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
            +       G  +       + +            LE  +P+I  GD N   +  D Y+P
Sbjct: 153 LVSVYVPNSGQRLER--LTYRTTEWDPAFSTYLLELEKRKPVIVTGDLNCAHEEIDIYDP 210

Query: 167 IIWENDACF-TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225
              +  A F   E         + G  D  R  H     +++W Y +++  +NKG R+D+
Sbjct: 211 DGNKRSAGFTCEERTSFQTNFIDKGLVDTFRKQHPLAVGFTYWSYRSNARPQNKGWRLDY 270

Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
            ++S    S +  + +  +  G    SDH P+ +
Sbjct: 271 FLVSQGLVSNVADSYVLPQLDG----SDHCPIGL 300


>gi|154149895|ref|YP_001403513.1| exodeoxyribonuclease III Xth [Candidatus Methanoregula boonei 6A8]
 gi|153998447|gb|ABS54870.1| exodeoxyribonuclease III Xth [Methanoregula boonei 6A8]
          Length = 269

 Score =  162 bits (409), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 72/272 (26%), Positives = 114/272 (41%), Gaps = 12/272 (4%)

Query: 1   MSVVTVATWNVNSIRARIH--NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           M  + + +WNV+ +RAR         + + + DI+CLQETKT + + P E      Y+  
Sbjct: 1   MEKLKLISWNVDGLRARCKAGQFIKLL-QVDFDILCLQETKTPELDIPQEIRSDKKYYSH 59

Query: 59  TCGQKSYN--GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
               +  +  GV ILSK +  +I  +  G   D + R + A +   T  L      L  G
Sbjct: 60  FSEVQKGSFAGVGILSKIECRQISDNFGGTKFDKEGRILIAEYDRFT--LLNIYFPLGAG 117

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
            P T      K+ +    L F  + L  ++ +I  GD+NI  +  D  N           
Sbjct: 118 KPDTPDTLSHKLEFYDTLLGFVKELLSQKKNVIICGDFNIAHKDKDLVNAKTTPLIVGIY 177

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
            E R+   +L+ +GF DA R  H     YS W Y  +S   N G R+D+  +S      +
Sbjct: 178 PEEREKLNELERLGFVDAFRYKHPNLVRYSRWPYQNNSRELNLGWRLDYFFVSAGLKDSI 237

Query: 237 HSARIDTKPRGWTKP-----SDHTPVIVSLDI 263
             + +   P           SDH P+ + L +
Sbjct: 238 TESEMLYHPGESDSHPQIAGSDHCPITLELSM 269


>gi|262373770|ref|ZP_06067048.1| exodeoxyribonuclease III [Acinetobacter junii SH205]
 gi|262311523|gb|EEY92609.1| exodeoxyribonuclease III [Acinetobacter junii SH205]
          Length = 280

 Score =  162 bits (409), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 62/267 (23%), Positives = 111/267 (41%), Gaps = 7/267 (2%)

Query: 2   SVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIET 59
            ++ V + NVN +R+ +   L  W+++++ D++C+QE++   + +  +      Y H+  
Sbjct: 18  KILRVVSINVNGLRSSVTKGLLEWLEQSDADVVCMQESRITHEQWTDKFKPEGWYTHLFP 77

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +  Y G AI S+   I +   L  +  D Q RFI A F +                  
Sbjct: 78  AERAGYAGTAIYSRLPFITVKNGLGFELADSQGRFITAEFDLGLSHPVHIASLYLPSGSS 137

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-E 178
                  K  ++  + +   Q  +  + +I  GDYNI+ +  D  N    +  +     E
Sbjct: 138 GEDAQARKDLFLLEYAKILKQWRDENKSIIVCGDYNIVHKRIDIKNWSGNQKSSGCLPHE 197

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
                    ++G+ D  R       LYS+W     + +KN G RID+   SP+  +   +
Sbjct: 198 RAWLDHIYDDLGYVDTFREVRQEAELYSWWSNRGQARAKNVGWRIDYQACSPDWKARTTN 257

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           A +  +       SDH PVI+   I E
Sbjct: 258 AWVYKE----QWFSDHAPVIIDYKINE 280


>gi|256824866|ref|YP_003148826.1| exodeoxyribonuclease III [Kytococcus sedentarius DSM 20547]
 gi|256688259|gb|ACV06061.1| exodeoxyribonuclease III [Kytococcus sedentarius DSM 20547]
          Length = 307

 Score =  162 bits (409), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 55/307 (17%), Positives = 102/307 (33%), Gaps = 47/307 (15%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + +A++NVN IRA        W+    PD++ LQE +      P       +   +   +
Sbjct: 1   MRIASFNVNGIRACQTRGFEHWLARRQPDVVSLQEVRCPVSLLPSGVFGEYHLSYDPGDR 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA------------------------T 98
              NGVA+L++  P  + T                                         
Sbjct: 61  AGRNGVAVLTREAPAAVRTFGAPVLRRAPGEEHTELTEPDAGPTLPRELKEFAGEGRYIE 120

Query: 99  FTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL-------------- 144
             +    + + +LYLP G      +        +     A    ++              
Sbjct: 121 VDLADAPVTVASLYLPKGGLPADLQEKMAKRMREAPDGGAKYDRKMRFLAGFAKQLDRSR 180

Query: 145 ------EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAI--R 196
                     +  GD+N+     D  N    +N   F    R+ F  + +      +   
Sbjct: 181 KAAAAAGREFVVMGDFNVAHTERDVKNWRGNKNSEGFLPSEREWFGSILSPRTLVDVVRS 240

Query: 197 ATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTP 256
              DT   Y++W +   ++ ++ G RID+ + +P     + SA +D +P    + SDH P
Sbjct: 241 QYPDTDGPYAWWSWMGQAFERDTGWRIDYHLATPTLARSVESAGVDKEPSRAERLSDHAP 300

Query: 257 VIVSLDI 263
           V+V   +
Sbjct: 301 VVVDYRL 307


>gi|154151954|ref|YP_001405572.1| exodeoxyribonuclease III Xth [Candidatus Methanoregula boonei 6A8]
 gi|154000506|gb|ABS56929.1| exodeoxyribonuclease III Xth [Methanoregula boonei 6A8]
          Length = 270

 Score =  161 bits (408), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 67/266 (25%), Positives = 111/266 (41%), Gaps = 15/266 (5%)

Query: 5   TVATWNVNSIRAR--IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           T+ +WNVN +R              +NP+I+C+QETK   +  P        YH      
Sbjct: 3   TILSWNVNGLRGCYDRKQFLPVF-RHNPEIVCVQETKAPGEKLPERVRNLYGYHTFFSAV 61

Query: 63  KSYNG--VAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            + +   V + ++++P+ +       D D + R + A +        + N+  P G    
Sbjct: 62  PAGSTAGVGLFTRHEPLSVQYGFGDPDFDNKGRVLMADYG----RFVLLNIAFPLG-IKP 116

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE-NDACFTLEV 179
               D+K+ +   FL +     E    +I  GD+N+     D YNP          + + 
Sbjct: 117 MGNLDNKLRFYDAFLLYIRSLCEQGRAVIVCGDFNVAHTDKDLYNPPKKPVRQVGISPDE 176

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R    +L  +GFTD  R  H     Y+ W +  +S  +N G RID+  +S      +  A
Sbjct: 177 RGRIDQLIALGFTDTFRLFHAGPGYYTRWPFQNNSRERNFGWRIDYCFVSQALRPFVADA 236

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPE 265
            I  +     K SDH PV + L++PE
Sbjct: 237 TILHEI----KGSDHCPVALELNLPE 258


>gi|67459413|ref|YP_247037.1| exodeoxyribonuclease III [Rickettsia felis URRWXCal2]
 gi|67004946|gb|AAY61872.1| Exodeoxyribonuclease III [Rickettsia felis URRWXCal2]
          Length = 267

 Score =  161 bits (408), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 78/263 (29%), Positives = 121/263 (46%), Gaps = 7/263 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62
           + + TWN+NS+R RI  L     E+ PDII LQETK +D  FP E ++++ Y H+   GQ
Sbjct: 1   MKIVTWNINSLRLRIDLLRKLAHEHQPDIILLQETKVDDSLFPLEVIKNIGYEHVTYSGQ 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           KSYNGVAI+SK+    + +    +        I     I+   +          +   + 
Sbjct: 61  KSYNGVAIISKFPLNNVFSLELYNSDKRHIAAIVNDIEIHNFYV---PAGGDIPDIEVNL 117

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           K+  K+ +++    + +      + +I  GD NI P  HD ++     N    T   R  
Sbjct: 118 KFKHKLEYVRLMQEWLTTNRTKNDKIIIVGDLNIAPLEHDVWSSKQLRNVISHTDIERSL 177

Query: 183 FQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLLHSA 239
             +LQN       +          Y++W Y    W K N+G R+DHI +S      L S 
Sbjct: 178 LVELQNSLGFIDSSRHFVPFDEKFYTWWSYRNIDWKKSNRGRRLDHIWVSDNLKDALFSI 237

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
            + ++ R W+ PSDH P  V+L 
Sbjct: 238 HLLSEARDWSPPSDHVPYFVTLK 260


>gi|326381939|ref|ZP_08203632.1| exodeoxyribonuclease III [Gordonia neofelifaecis NRRL B-59395]
 gi|326199365|gb|EGD56546.1| exodeoxyribonuclease III [Gordonia neofelifaecis NRRL B-59395]
          Length = 281

 Score =  161 bits (408), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 76/281 (27%), Positives = 119/281 (42%), Gaps = 21/281 (7%)

Query: 1   MSV--VTVATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51
           MS    +V T NVN IRA +         +  W++   PD++ +QE +  D     + LQ
Sbjct: 1   MSTSAFSVTTINVNGIRAAVKHRSEENLGMLPWLETAAPDVVLMQEVRASDA-LARKALQ 59

Query: 52  ---SLNYHIETCGQKSYNG--VAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
                 +H      ++     V ILS+ QP  +      ++ DV  R+IEA F I+  T+
Sbjct: 60  PALDAGWHFVHTESEAKGRAGVGILSRQQPSAVRIGFGSEEFDVAGRYIEADFDIDGDTV 119

Query: 107 RIGNLYLPHG-----NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161
              +LYLP G     N     KY++K+ ++  F     + L      + AGD+NI P   
Sbjct: 120 TAASLYLPTGAALTENEKDVEKYEEKLRFLTAFGPHLDKLLGSGGLAVVAGDWNIAPDER 179

Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKG 220
           D  N      +A F    R+    L   G+ D  RA H D    Y++W +   ++  + G
Sbjct: 180 DIKNWKGNVKNAGFLPHEREWVAGLLEAGWVDLARAHHGDVAGPYAWWSWRGKAFDNDAG 239

Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
            RID+ + +P          +D       + SDH PV    
Sbjct: 240 WRIDYHLATPALAERAQRTWVDRADAYHLRWSDHAPVTAVF 280


>gi|300362953|ref|ZP_07059123.1| exodeoxyribonuclease III [Lactobacillus gasseri JV-V03]
 gi|300353003|gb|EFJ68881.1| exodeoxyribonuclease III [Lactobacillus gasseri JV-V03]
          Length = 268

 Score =  161 bits (408), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 65/262 (24%), Positives = 109/262 (41%), Gaps = 12/262 (4%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++   +WNVN +RA + H       + + DI  +Q+T+ E      + L     +     
Sbjct: 14  IMKFMSWNVNGLRAALRHGFVNTFTDLDADIFAIQDTRVEANEVQID-LPGYYQYWNYAK 72

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y G A+ +K +PI +       ++D + R I   F        I       G  +  
Sbjct: 73  RKGYAGTAVFTKEKPITVANGFGVPEVDGEGRSITLEFPNFYF---IDVQVPFSGEKLQR 129

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
             + +  +   R        L   +P+I  GD ++  +  D   P      A FT   R+
Sbjct: 130 LDFRELWAQTFRNYVTK---LMQYKPVIIGGDMSVAHEKIDLAEPDDNHRHAGFTGIERK 186

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
            F +L N GF D  R  H     Y++W Y  D+ +KN G R+D+ ++S      + + +I
Sbjct: 187 EFSELLNAGFIDTFRYFHPDEAKYTYWSYREDARAKNIGWRLDYFLVSHNLEDKIINTKI 246

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
                G    SDH P+ + LDI
Sbjct: 247 LNNIMG----SDHCPIELDLDI 264


>gi|328956310|ref|YP_004373643.1| exodeoxyribonuclease III Xth [Coriobacterium glomerans PW2]
 gi|328456634|gb|AEB07828.1| exodeoxyribonuclease III Xth [Coriobacterium glomerans PW2]
          Length = 283

 Score =  161 bits (408), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 65/269 (24%), Positives = 106/269 (39%), Gaps = 15/269 (5%)

Query: 5   TVATWNVNSIRARIHN---LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
             A+WNVN +RA +      +      N DI+ +QETK ++     + L   +       
Sbjct: 20  RFASWNVNGLRALMKKEPDFSEIAASLNADILAIQETKLQEGQIDLD-LAGYHQTWSYAA 78

Query: 62  QKSYNGVAILSKYQPIEIVTHL------PGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
           +K Y+G A+ S+ QPI  +          G +L   A        +  +     ++Y P+
Sbjct: 79  RKGYSGTAVFSREQPIRTLRADAMLDVVEGGELLEPAIREGRVCALEFERFWFADVYTPN 138

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
                +                       ++P++  GD+N+     D  NP     +A F
Sbjct: 139 SQDGLARLPVRLAWDEAYRAFLKQLERMGDKPVVTCGDFNVAHNEIDLRNPKSNRGNAGF 198

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
           + E R SF +L   GFTD  R  +      YS+W Y   +   N G RID+ ++S     
Sbjct: 199 SDEERASFSRLLEAGFTDTFRYLYPDVRDAYSWWSYRFHARRTNAGWRIDYFLVSDSVRD 258

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            +  A I     G    SDH PV + + +
Sbjct: 259 RIVEATIRQDVFG----SDHCPVELVIAL 283


>gi|227547629|ref|ZP_03977678.1| exodeoxyribonuclease III [Bifidobacterium longum subsp. infantis
           ATCC 55813]
 gi|227211884|gb|EEI79780.1| exodeoxyribonuclease III [Bifidobacterium longum subsp. infantis
           ATCC 55813]
          Length = 286

 Score =  161 bits (408), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 64/286 (22%), Positives = 105/286 (36%), Gaps = 26/286 (9%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI---- 57
            +T+ T NVN IRA     +  W  ++ PD+ C+QE +   ++          +      
Sbjct: 2   TITITTSNVNGIRAAKRKGIEDWAGKHAPDVWCMQEVRAPQEDVDS-IFGEFGFEYATAG 60

Query: 58  ------------ETCGQKSYNGVAILSKYQPIEIVTHLP--GDDLDVQARFIEATFTINT 103
                       E C  K   GV +L+  +  +    LP  G+D+D          T   
Sbjct: 61  KIASPSDLHSLNEVCRVKGRAGVGLLTDLEVTDKRYGLPSLGEDVDSGRWIETDVKTPQG 120

Query: 104 QTLRIGNLYLPHGNPIT----STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159
            T+ +  +Y+  GN         KY    + + R      +     +  +  GD+NI   
Sbjct: 121 YTITVACVYVHAGNTDDSTKMEQKYRFLDTMLTRMGELRDEAAHGGKQAVLCGDFNIAHT 180

Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSWSK 217
           P D  N    E  A F  E R    K  +      +  +   D    Y++W     ++  
Sbjct: 181 PLDIKNAKANEKHAGFLPEERAYVDKWLDEYEFVDVMRSLAGDIRGPYTWWSQRGRAFDN 240

Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           N G RID+   +PE         ID  P    + SDH P+ ++ D+
Sbjct: 241 NVGWRIDYQFATPELAETARGFVIDKAPTYELRWSDHAPLTITYDV 286


>gi|116630243|ref|YP_815415.1| exonuclease III [Lactobacillus gasseri ATCC 33323]
 gi|116095825|gb|ABJ60977.1| Exonuclease III [Lactobacillus gasseri ATCC 33323]
          Length = 268

 Score =  161 bits (408), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 66/262 (25%), Positives = 110/262 (41%), Gaps = 12/262 (4%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++   +WNVN +RA + H       + + DI  +Q+T+ E      + L     +     
Sbjct: 14  IMKFMSWNVNGLRAALRHGFVNTFTDLDADIFAIQDTRVEPNEVQID-LPGYYQYWNYAK 72

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y G A+ +K +PI +       ++D + R I   F+       I       G  +  
Sbjct: 73  RKGYAGTAVFTKEKPITVANGFGVPEVDGEGRSITLEFSNFYF---IDVQVPFSGEKLQR 129

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
             + +  +   R        L   +P+I  GD ++     D   P      A FT   R+
Sbjct: 130 LDFRELWAQTFRNYVTK---LMQYKPVIIGGDMSVAHDKIDLAEPDDNHRHAGFTGIERK 186

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
            F +L N GF D  R  H     Y++W Y  D+ +KN G R+D+ ++S      + +A+I
Sbjct: 187 EFSELLNAGFIDTFRYFHPDEAKYTYWSYREDARAKNIGWRLDYFLVSNNLEDKMINAQI 246

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
                G    SDH P+ + LDI
Sbjct: 247 LNNIMG----SDHCPIELDLDI 264


>gi|38234604|ref|NP_940371.1| putative exonuclease [Corynebacterium diphtheriae NCTC 13129]
 gi|38200868|emb|CAE50573.1| Putative exonuclease [Corynebacterium diphtheriae]
          Length = 235

 Score =  161 bits (408), Expect = 8e-38,   Method: Composition-based stats.
 Identities = 71/258 (27%), Positives = 117/258 (45%), Gaps = 23/258 (8%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A WNVNS RAR+  +  +++ ++ D++ +QETK  D  FP    +   Y     G  
Sbjct: 1   MRIANWNVNSARARVDRIQDFLERHDIDVLAMQETKCRDDQFP----EFKGYEAAHFGIN 56

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVAILS+    +++T            F   +       +R+ +LY+P+G  I    
Sbjct: 57  QWNGVAILSRVGIEDVLTSFGQ---PDYEEFEPRSIGAICGGVRVWSLYVPNGREIAHPH 113

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           YD K+ W+        Q   +    ++ GD+NI P  +D ++   +      T   RQ+F
Sbjct: 114 YDYKLRWLYA-----LQHYGVTGDTVWCGDFNIAPTDNDVWDIDFFHGKTHVTEPERQAF 168

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + L +            +   Y++WDY A  + KN+G+RID  +     T       ID 
Sbjct: 169 EALTD-------IMPITSPEGYTYWDYTAGRFPKNQGMRIDFQL--SNMTP--TGGFIDV 217

Query: 244 KPRGWTKPSDHTPVIVSL 261
           + R     SDH PV+V  
Sbjct: 218 EERKGKGASDHAPVVVDY 235


>gi|145225449|ref|YP_001136127.1| exodeoxyribonuclease III Xth [Mycobacterium gilvum PYR-GCK]
 gi|315445802|ref|YP_004078681.1| exodeoxyribonuclease III [Mycobacterium sp. Spyr1]
 gi|145217935|gb|ABP47339.1| exodeoxyribonuclease III Xth [Mycobacterium gilvum PYR-GCK]
 gi|315264105|gb|ADU00847.1| exodeoxyribonuclease III [Mycobacterium sp. Spyr1]
          Length = 274

 Score =  161 bits (408), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 68/273 (24%), Positives = 112/273 (41%), Gaps = 19/273 (6%)

Query: 4   VTVATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKNFPFETLQSL--N 54
           VTV+T NVN IRA I         +  W KE   D++CLQET+ +D          L   
Sbjct: 5   VTVSTINVNGIRAAIKQRSPENLGMLPWFKETAADVVCLQETRADDAQLAEALAPVLADG 64

Query: 55  YHIET--CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           +H+ +     K  NGVA+LS+    E       ++     R++EA        + + ++Y
Sbjct: 65  WHLASAEPSMKGRNGVAVLSRDPIDEFRIGCGAEEFATHGRYLEADTAG----VTVASVY 120

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFA---SQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
            P G   T  + + +        R A    + +      +  GD+NI    +D  N    
Sbjct: 121 FPTGEAETDRQREKERFMAAVAARMAALLQRSVVDGHESVLCGDWNIAHTENDIKNWKGN 180

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIML 228
              A F  + RQ   ++   G+ D +R  H      Y++W +   ++  + G RID+ + 
Sbjct: 181 VKKAGFLPQERQWLTEVLGTGWVDVVRQAHPDVAGPYAWWSWRGKAFDNDAGWRIDYHLA 240

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           +P   +   S   +       + SDH PV V  
Sbjct: 241 TPGLAARATSVLTERPAAYALRWSDHCPVTVHY 273


>gi|296113045|ref|YP_003626983.1| catabolite repression control protein [Moraxella catarrhalis RH4]
 gi|295920739|gb|ADG61090.1| catabolite repression control protein [Moraxella catarrhalis RH4]
          Length = 336

 Score =  161 bits (408), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 63/268 (23%), Positives = 110/268 (41%), Gaps = 12/268 (4%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE--T 59
           V+ V + NVN +RA        W+  ++ D++C+QE++   + +  +  +   +H     
Sbjct: 74  VLRVVSINVNGLRAAEKKGFFEWLAISDADVVCIQESRITHEQWT-DKFRPKGWHTHLFA 132

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL---YLPHG 116
             +  Y GVAI S+   + +V  L  D  D Q RFI A F ++ Q +             
Sbjct: 133 AQKAGYAGVAIYSRLPFVSVVDGLGFDLADSQGRFICAQFDLSAQGIDHPVYIASLYLPS 192

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
                     K  +++++     Q  +  + LI  GDYNI+ +  D  N    +  +   
Sbjct: 193 GSSGEEAQARKDLFLEKYRHILKQWRDENKSLIVCGDYNIVHKRIDIKNWSGNQKASGCL 252

Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
             E          +G+ D  R       +YS+W     + +KN G RID+   SP+    
Sbjct: 253 PHERAWLDHIYDELGYVDTFRVVRKDADIYSWWSNRGQARAKNVGWRIDYHACSPDWKKR 312

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             +A +       +  SDH PVI+   +
Sbjct: 313 TLNAWVYKD----SWFSDHAPVIIDYQL 336


>gi|269955565|ref|YP_003325354.1| exodeoxyribonuclease III Xth [Xylanimonas cellulosilytica DSM
           15894]
 gi|269304246|gb|ACZ29796.1| exodeoxyribonuclease III Xth [Xylanimonas cellulosilytica DSM
           15894]
          Length = 279

 Score =  161 bits (408), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 57/280 (20%), Positives = 98/280 (35%), Gaps = 20/280 (7%)

Query: 3   VVTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++TVAT NVN IRA +   + +WI + +PD++ +QE +  D           +   + C 
Sbjct: 1   MLTVATANVNGIRAAMRRGMDSWIADRSPDVLLMQEVRAPDAVLDG-FFDGWHVAHQACD 59

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
            K   GVA+ S+     +   L            E    ++T      ++ LP G  +T 
Sbjct: 60  IKGRAGVAVASRLPVHAVRVGLEAYGPRSSEGGCEPEPAVDTGRWVEADVELPGGGLLTV 119

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFA----------------GDYNIIPQPHDCYN 165
                                +                        GD NI     D  N
Sbjct: 120 VSAYIHSGSTWPVDNPVKMVEKYAYLEKVTARLAELGSGPTPTLVAGDLNIAHHNVDIAN 179

Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH--DTHHLYSFWDYYADSWSKNKGIRI 223
                 +A F  E R    +  +      +   H  +    Y++W +   ++  +KG RI
Sbjct: 180 WKGNLKNAGFLPEERAYLDRWFDELGWTDLGRAHGGEGPGPYTWWSWRGQAYVNDKGWRI 239

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           D+ + +P          +D  P    + SDH P+I + D+
Sbjct: 240 DYQLANPALAPRALKVEVDRAPTYEERWSDHAPLIATYDL 279


>gi|121592667|ref|YP_984563.1| exodeoxyribonuclease III Xth [Acidovorax sp. JS42]
 gi|120604747|gb|ABM40487.1| exodeoxyribonuclease III Xth [Acidovorax sp. JS42]
          Length = 267

 Score =  161 bits (408), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 69/272 (25%), Positives = 114/272 (41%), Gaps = 16/272 (5%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTE--DKNFPFETLQSLNYHIET 59
           +  + + N+N IR+     + AWI ++ PD IC+QE K +  D    FE L  L  +   
Sbjct: 1   MFKLTSLNLNGIRSATSKGVEAWIAQSRPDCICVQEIKAQSADMQGRFEELAGLKGYFHF 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GV I ++++P ++V      + D + R++E  F    + L I + Y P G+  
Sbjct: 61  AVKKGYSGVGIYARHEPSDVVIGYGSSEFDTEGRYVELRFDTPARRLSIISAYFPSGSSG 120

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +                 RL+ E   I  GD NI  Q  D  N    + ++ F  E 
Sbjct: 121 EERQLA--KFRFLEEFHPHLMRLKAEREFILCGDINIAHQQIDLKNWRSNQKNSGFLPEE 178

Query: 180 RQSFQKL-----QNMGFTDAIRATHDT--HHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
           R    KL        G  D  R          Y++W     +++ N G R+D+ + +P  
Sbjct: 179 RAWMTKLLHISDPAGGLVDVYRQLQPETTDACYTWWSNRGQAYANNVGWRLDYHLATPAI 238

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
            +L  +  I        K SDH P+ V  ++ 
Sbjct: 239 AALARTEEIYKA----QKFSDHAPITVGYELS 266


>gi|120608991|ref|YP_968669.1| exodeoxyribonuclease III Xth [Acidovorax citrulli AAC00-1]
 gi|120587455|gb|ABM30895.1| exodeoxyribonuclease III Xth [Acidovorax citrulli AAC00-1]
          Length = 264

 Score =  161 bits (407), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 69/267 (25%), Positives = 115/267 (43%), Gaps = 16/267 (5%)

Query: 7   ATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFP--FETLQSLNYHIETCGQK 63
            + N+N IR A    + AWI E  PD IC+QE K +  +    FETL  L  H     +K
Sbjct: 2   TSLNLNGIRSAASKGVEAWIAETRPDCICVQEIKAQSADIEGRFETLAGLKGHFHYATKK 61

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            Y+GV I ++++P ++       + D + R++EA F   ++ L I + Y P G+     +
Sbjct: 62  GYSGVGIYTRHEPSDVRVGYGSTEFDAEGRYVEARFDTPSRKLSIISAYFPSGSSGPERQ 121

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
                            R++ E   I  GD NI  Q  D  N    + ++ F  E R+  
Sbjct: 122 LA--KFRFLAEFHVHLMRVKEEREFILCGDVNIAHQQIDLKNWRSNQKNSGFLPEEREWM 179

Query: 184 QKLQNMGFTD-------AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
            KL +             +     T   Y++W     +++ N G R+D+ + +P   +L 
Sbjct: 180 TKLLHKTDPGGGLVDVYRLLQPDTTETAYTWWSNRGQAYANNVGWRLDYHLATPAIAALA 239

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263
            +  I  +     K SDH P+ V  ++
Sbjct: 240 RTESIYKQ----QKFSDHAPITVGYEL 262


>gi|160895788|ref|YP_001561370.1| exodeoxyribonuclease III Xth [Delftia acidovorans SPH-1]
 gi|160361372|gb|ABX32985.1| exodeoxyribonuclease III Xth [Delftia acidovorans SPH-1]
          Length = 267

 Score =  161 bits (407), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 69/271 (25%), Positives = 116/271 (42%), Gaps = 16/271 (5%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFP--FETLQSLNYHIET 59
           +  + + N+N IR+     + AWI+   PD IC+QE K +  +    FE L  L  H   
Sbjct: 1   MFKLTSLNLNGIRSASTKGVEAWIEATAPDCICVQEIKAQAADMTGRFELLAGLRGHFHY 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GV + S+++P ++V      + D + R++EA F    + L I + Y P G+  
Sbjct: 61  AEKKGYSGVGVYSRHEPSDVVVGFGSHEFDAEGRYVEARFDTPARKLSIISAYFPSGSSG 120

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                          +     R++ E   I  GD NI  Q  D  N    + ++ FT E 
Sbjct: 121 ELR--QTAKFRFLAEMHEHLMRMKGEREFILCGDINIAHQQIDLKNWRSNQKNSGFTPEE 178

Query: 180 RQSFQKLQNMGFTD-------AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
           R+   KL +             +     T   Y++W     +++ N G R+D+ + +P  
Sbjct: 179 REWMTKLLHKTDPTGGLVDVYRLLQPDTTDACYTWWSNRGQAYANNVGWRLDYHLATPAI 238

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            +L  +  I        K SDH PV +  D+
Sbjct: 239 AALARTEHIYKDV----KFSDHAPVTIGYDM 265


>gi|317482487|ref|ZP_07941503.1| exodeoxyribonuclease III [Bifidobacterium sp. 12_1_47BFAA]
 gi|316916039|gb|EFV37445.1| exodeoxyribonuclease III [Bifidobacterium sp. 12_1_47BFAA]
          Length = 286

 Score =  161 bits (407), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 64/286 (22%), Positives = 105/286 (36%), Gaps = 26/286 (9%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI---- 57
            +T+ T NVN IRA     +  W  ++ PD+ C+QE +    +          +      
Sbjct: 2   TITITTSNVNGIRAAKRKGIEDWAGKHAPDVWCIQEVRAPQDDVDS-IFDEFGFEYATAG 60

Query: 58  ------------ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR--FIEATFTINT 103
                       E C  K   GV +L+  + +     LPG   DV +         T   
Sbjct: 61  KIEAPANLHAMNEVCRVKGRAGVGLLTDLEVLAKRYGLPGLSEDVDSGRWIETDVKTPEG 120

Query: 104 QTLRIGNLYLPHGNPITS----TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159
            T+ + ++Y+  GN         KY    + +KR      +     +  +  GD+NI   
Sbjct: 121 YTVTVASVYVHAGNTDDPTKMEQKYRFLDTMLKRMGALRDEAAHGGKQAVLCGDFNIAHT 180

Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSWSK 217
           P D  N    E  A F  E R    K  +      +  +   D    Y++W     ++  
Sbjct: 181 PLDIKNAKANEKHAGFLPEERAYVDKWLDEYEFVDVMRSLAGDIQGPYTWWSQRGRAFDN 240

Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           N G RID+   +PE         ID  P    + SDH P+ ++ ++
Sbjct: 241 NVGWRIDYQFATPELAETARGFVIDKAPTYDKRWSDHAPLTITYEV 286


>gi|222109447|ref|YP_002551711.1| exodeoxyribonuclease iii xth [Acidovorax ebreus TPSY]
 gi|221728891|gb|ACM31711.1| exodeoxyribonuclease III Xth [Acidovorax ebreus TPSY]
          Length = 267

 Score =  161 bits (407), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 69/272 (25%), Positives = 115/272 (42%), Gaps = 16/272 (5%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTE--DKNFPFETLQSLNYHIET 59
           +  + + N+N IR+     + AWI ++ PD IC+QE K +  D    FE L  L  +   
Sbjct: 1   MFKLTSLNLNGIRSATSKGVEAWIAQSRPDCICVQEIKAQSADMQGRFEELAGLKGYFHF 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GV I ++++P ++V      + D + R++E  F    + L I + Y P G+  
Sbjct: 61  AVKKGYSGVGIYARHEPSDVVIGYGSSEFDTEGRYVELRFDTPARRLSIISAYFPSGSSG 120

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +                 RL+ E   I  GD NI  Q  D  N    + ++ F  E 
Sbjct: 121 EERQLA--KFRFLEEFHPHLMRLKAEREFILCGDINIAHQQIDLKNWRSNQKNSGFLPEE 178

Query: 180 RQSFQKLQN-----MGFTDAIRATHDT--HHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
           R    KL +      G  D  R          Y++W     +++ N G R+D+ + +P  
Sbjct: 179 RAWMTKLLHISDPTGGLVDVYRQLQPEATDACYTWWSNRGQAYANNVGWRLDYHLATPAI 238

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
            +L  +  I        K SDH P+ V  ++ 
Sbjct: 239 AALARTEEIYKA----QKFSDHAPITVGYELS 266


>gi|332187721|ref|ZP_08389456.1| exodeoxyribonuclease III family protein [Sphingomonas sp. S17]
 gi|332012287|gb|EGI54357.1| exodeoxyribonuclease III family protein [Sphingomonas sp. S17]
          Length = 260

 Score =  161 bits (407), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 66/263 (25%), Positives = 114/263 (43%), Gaps = 8/263 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62
           + +A+WN+NS+R R   +  ++ E  PDI+CLQETK  D +FPF+  ++  Y HI   GQ
Sbjct: 1   MKIASWNINSVRFRAAIVEQFLTEAAPDILCLQETKVVDDDFPFDLFRAAGYEHIIIHGQ 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           + ++GVAI S+   +E        + + +   +     +  + + I       G+     
Sbjct: 61  RMHHGVAIASRVPIVEDDRLDWQANAEARHVGVRLPNGVRLENVYI----PAGGDVPDRE 116

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ- 181
                   +    R      +L+ P I  GD+NI P   D ++     +    T    + 
Sbjct: 117 VNPKFGQKLDFLGRMIEWSGKLDCPTILTGDFNIAPLESDVWSHKQLLDVVSHTPIEVET 176

Query: 182 -SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLLHSA 239
            +  +  N               LY++W Y A  W + ++G R+DH+  + +        
Sbjct: 177 LASLQASNDWVDLGRHFIPAPQRLYTWWSYRAKDWAASDRGRRLDHMWATRDVAEKAIGH 236

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
           R+    R W KPSDH P++   D
Sbjct: 237 RVFEGCRSWLKPSDHIPIMTEFD 259


>gi|311110171|ref|ZP_07711568.1| exodeoxyribonuclease III [Lactobacillus gasseri MV-22]
 gi|311065325|gb|EFQ45665.1| exodeoxyribonuclease III [Lactobacillus gasseri MV-22]
          Length = 265

 Score =  161 bits (407), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 66/262 (25%), Positives = 110/262 (41%), Gaps = 12/262 (4%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++   +WNVN +RA + H       + + DI  +Q+T+ E      + L     +     
Sbjct: 11  IMKFMSWNVNGLRAALRHGFVNTFTDLDADIFAIQDTRVEPNEVQID-LPGYYQYWNYAK 69

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y G A+ +K +PI +       ++D + R I   F+       I       G  +  
Sbjct: 70  RKGYAGTAVFTKEKPITVANGFGVPEVDGEGRSITLEFSNFYF---IDVQVPFSGEKLQR 126

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
             + +  +   R        L   +P+I  GD ++     D   P      A FT   R+
Sbjct: 127 LDFRELWAQTFRNYVTK---LMQYKPVIIGGDMSVAHDKIDLAEPDDNHRHAGFTGIERK 183

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
            F +L N GF D  R  H     Y++W Y  D+ +KN G R+D+ ++S      + +A+I
Sbjct: 184 EFSELLNAGFIDTFRYFHPDEAKYTYWSYREDARAKNIGWRLDYFLVSNNLEDKMINAQI 243

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
                G    SDH P+ + LDI
Sbjct: 244 LNNIMG----SDHCPIELDLDI 261


>gi|326577094|gb|EGE26988.1| catabolite repression control protein [Moraxella catarrhalis O35E]
          Length = 335

 Score =  161 bits (407), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 64/268 (23%), Positives = 110/268 (41%), Gaps = 12/268 (4%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE--T 59
           V+ V + NVN +RA        W+  +N D++C+QE++   + +  +  +   +H     
Sbjct: 73  VLRVVSINVNGLRAAEKKGFFEWLAVSNADVVCIQESRITHEQWT-DKFRPKGWHTHLFA 131

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL---YLPHG 116
             +  Y GVAI S+   + +V  L  D  D Q RFI A F ++ Q +             
Sbjct: 132 AQKAGYAGVAIYSRLPFVSVVDGLGFDLADSQGRFICAQFDLSAQGIDHPVYIASLYLPS 191

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
                     K  +++++     Q  +  + LI  GDYNI+ +  D  N    +  +   
Sbjct: 192 GSSGEEAQARKDLFLEKYRHILKQWRDENKSLIVCGDYNIVHKRIDIKNWSGNQKASGCL 251

Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
             E          +G+ D  R       +YS+W     + +KN G RID+   SP+    
Sbjct: 252 PHERAWLDHIYDELGYVDTFRVVRKDADIYSWWSNRGQARAKNVGWRIDYHACSPDWKKR 311

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             +A +       +  SDH PVI+   +
Sbjct: 312 TLNAWVYKD----SWFSDHAPVIIDYQL 335


>gi|319948930|ref|ZP_08023037.1| exodeoxyribonuclease III Xth [Dietzia cinnamea P4]
 gi|319437410|gb|EFV92423.1| exodeoxyribonuclease III Xth [Dietzia cinnamea P4]
          Length = 284

 Score =  161 bits (407), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 59/279 (21%), Positives = 107/279 (38%), Gaps = 20/279 (7%)

Query: 4   VTVATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKNFPFETLQSL--N 54
           +TV+T NVN IRA +            W++ +  D++ LQE + ++         +L   
Sbjct: 6   LTVSTVNVNGIRAAVKQRSETNLGFLPWLESSGADVVALQEVRADEDQTRKALAPALDAG 65

Query: 55  YHIE--TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT--INTQTLRIGN 110
           +H+       K   GVA+LS+ +  ++       +     R+IEA +   ++ +T+ + +
Sbjct: 66  WHLIGSASSMKGRAGVALLSRQESSDVCVGYGDPEFAESGRYIEAVYPGAVDGETVTVAS 125

Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRL----ELEEPLIFAGDYNIIPQPHDCYNP 166
           LYLP G+  T  + +            A +           +I  GD+NI  +  D  N 
Sbjct: 126 LYLPSGSANTPKQDEKDRFLKTFREFLAERAAELKSREGHEMIICGDWNIAHREEDLKNH 185

Query: 167 IIWENDACFTLEVRQSFQKLQN---MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223
                 + F    R+    +                D    YS+W     ++  + G RI
Sbjct: 186 KGNHKSSGFLPHEREWMTDVFADGSGWTDIVRHRRPDEVGPYSWWSQRGKAFDNDAGWRI 245

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
           D+ ++S           +D       + SDH PV V  +
Sbjct: 246 DYQVVSDGLVDRAVKDWVDRAEAYDMRWSDHAPVTVVYE 284


>gi|213691818|ref|YP_002322404.1| exodeoxyribonuclease III Xth [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|213523279|gb|ACJ52026.1| exodeoxyribonuclease III Xth [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|320457912|dbj|BAJ68533.1| putative exodeoxyribonuclease [Bifidobacterium longum subsp.
           infantis ATCC 15697]
          Length = 286

 Score =  161 bits (406), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 63/286 (22%), Positives = 105/286 (36%), Gaps = 26/286 (9%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI---- 57
            +T+ T NVN IRA     +  W  ++ PD+ C+QE +    +          +      
Sbjct: 2   TITITTSNVNGIRAAKRKGIEDWAGKHAPDVWCIQEVRAPQDDVDS-IFDEFGFEYATAG 60

Query: 58  ------------ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR--FIEATFTINT 103
                       E C  K   GV +L+  + ++    LPG   DV +         T   
Sbjct: 61  KIEAPANLHAMNEVCRVKGRAGVGLLTDLEVLDKRYGLPGLSEDVDSGRWIETDVKTPEG 120

Query: 104 QTLRIGNLYLPHGNPITS----TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159
             + + ++Y+  GN         KY    + +KR      +     +  +  GD+NI   
Sbjct: 121 YAITVASVYVHAGNTDDPTKMEQKYRFLDTMLKRMGALRDEAAHGGKQAVLCGDFNIAHT 180

Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSWSK 217
           P D  N    E  A F  E R    K  +      +  +   D    Y++W     ++  
Sbjct: 181 PLDIKNAKANEKHAGFLPEERAYVDKWLDEYEFVDVMRSLAGDIQGPYTWWSQRGRAFDN 240

Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           N G RID+   +PE         ID  P    + SDH P+ ++ ++
Sbjct: 241 NVGWRIDYQFATPELAETARGFVIDKAPTYDKRWSDHAPLTITYEV 286


>gi|199436395|dbj|BAG70947.1| thermostable exonuclease III [Thermoplasma acidophilum]
          Length = 250

 Score =  161 bits (406), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 66/260 (25%), Positives = 107/260 (41%), Gaps = 14/260 (5%)

Query: 5   TVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
              +WNVN +RA +     + +K+++   I LQETK +  + P E    L YH+     K
Sbjct: 4   KFLSWNVNGLRAAVKNGAVSVLKQDDYFGIALQETKADSTSVPEEMYH-LGYHLYNNPAK 62

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
                  +S  +   I      ++ + +   +E         + +      HG      K
Sbjct: 63  KKGYSGTMSLVREKPIAVSYGFENEEGRILNLEFDK---FYFINVYFPNAQHGLTRLDMK 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
            D             S  L  ++PLI  GD+N+  +  D   P   EN+A FT + R   
Sbjct: 120 LDFG-----EKFLEYSNELRKKKPLIICGDFNVAHEEIDIARPKDNENNAGFTKQERDWM 174

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            K  + G+ D  R        YS+W Y  ++ +KN G RID+ ++S +    +  A I  
Sbjct: 175 TKFLDSGYVDTYRIFMKEGGHYSWWSYRFNARAKNIGWRIDYFVVSDDIRDRVKKAEILE 234

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
              G    SDH PV + +D+
Sbjct: 235 TVTG----SDHAPVTLEVDL 250


>gi|269796071|ref|YP_003315526.1| exodeoxyribonuclease III Xth [Sanguibacter keddieii DSM 10542]
 gi|269098256|gb|ACZ22692.1| exodeoxyribonuclease III Xth [Sanguibacter keddieii DSM 10542]
          Length = 266

 Score =  161 bits (406), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 61/266 (22%), Positives = 109/266 (40%), Gaps = 5/266 (1%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           +VT+AT NVN +RA   + +  W+ E  P+I+ LQE +  D+       +  N   + C 
Sbjct: 1   MVTIATANVNGVRAAYRNGMGEWLAERKPEILLLQEVRATDEILEGLLGEGWNSVHQACD 60

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQA---RFIEATFTINTQTLRIGNLYLPHGNP 118
            K   GVAI +      +   L   + +V     R++EA   + +  +        H   
Sbjct: 61  IKGRAGVAIATTLPFAAVRVGLGNGEPEVPVDTGRWVEADIELPSGEVLTVVSVYIHSGT 120

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
             + K D K + +++      + ++    ++  GD NI  Q  D  N       A F  E
Sbjct: 121 AGTPKMDQKFAHLEKVDARLRELMDSGRHVVVGGDVNIAHQNVDIKNWKGNLKSAGFLPE 180

Query: 179 VRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
            R    +    G+ D  R    +    Y++W     S++ + G RID+ + +P    L  
Sbjct: 181 ERAYLDRWFEAGWVDLGRRHGGEGPGPYTWWSNRGQSFANDAGWRIDYQLSTPALAELAS 240

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +  +D       + SDH P++    +
Sbjct: 241 NVHVDRADSYEARWSDHAPLLADYAL 266


>gi|326561625|gb|EGE11962.1| catabolite repression control protein [Moraxella catarrhalis
           103P14B1]
 gi|326562589|gb|EGE12900.1| catabolite repression control protein [Moraxella catarrhalis
           46P47B1]
 gi|326564034|gb|EGE14278.1| catabolite repression control protein [Moraxella catarrhalis
           12P80B1]
 gi|326570498|gb|EGE20538.1| catabolite repression control protein [Moraxella catarrhalis BC8]
 gi|326575630|gb|EGE25553.1| catabolite repression control protein [Moraxella catarrhalis CO72]
          Length = 336

 Score =  161 bits (406), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 64/268 (23%), Positives = 110/268 (41%), Gaps = 12/268 (4%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE--T 59
           V+ V + NVN +RA        W+  +N D++C+QE++   + +  +  +   +H     
Sbjct: 74  VLRVVSINVNGLRAAEKKGFFEWLAVSNADVVCIQESRITHEQWT-DKFRPKGWHTHLFA 132

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL---YLPHG 116
             +  Y GVAI S+   + +V  L  D  D Q RFI A F ++ Q +             
Sbjct: 133 AQKAGYAGVAIYSRLPFVSVVDGLGFDLADSQGRFICAQFDLSAQGIDHPVYIASLYLPS 192

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
                     K  +++++     Q  +  + LI  GDYNI+ +  D  N    +  +   
Sbjct: 193 GSSGEEAQARKDLFLEKYRHILKQWRDENKSLIVCGDYNIVHKRIDIKNWSGNQKASGCL 252

Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
             E          +G+ D  R       +YS+W     + +KN G RID+   SP+    
Sbjct: 253 PHERAWLDHIYDELGYVDTFRVVRKDADIYSWWSNRGQARAKNVGWRIDYHACSPDWKKR 312

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             +A +       +  SDH PVI+   +
Sbjct: 313 TLNAWVYKD----SWFSDHAPVIIDYQL 336


>gi|326560422|gb|EGE10804.1| catabolite repression control protein [Moraxella catarrhalis 7169]
 gi|326565843|gb|EGE16005.1| catabolite repression control protein [Moraxella catarrhalis BC1]
 gi|326571181|gb|EGE21205.1| catabolite repression control protein [Moraxella catarrhalis BC7]
          Length = 336

 Score =  161 bits (406), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 64/268 (23%), Positives = 110/268 (41%), Gaps = 12/268 (4%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE--T 59
           V+ V + NVN +RA        W+  +N D++C+QE++   + +  +  +   +H     
Sbjct: 74  VLRVVSINVNGLRAAEKKGFFEWLAVSNADVVCIQESRITHEQWT-DKFRPKGWHTHLFA 132

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL---YLPHG 116
             +  Y GVAI S+   + +V  L  D  D Q RFI A F ++ Q +             
Sbjct: 133 AQKAGYAGVAIYSRLPFVSVVDGLGFDLADSQGRFICAQFDLSAQGIDHPVYIASLYLPS 192

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
                     K  +++++     Q  +  + LI  GDYNI+ +  D  N    +  +   
Sbjct: 193 GSSGEEAQARKDLFLEKYRHILKQWRDENKSLIVCGDYNIVHKRIDIKNWSGNQKASGCL 252

Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
             E          +G+ D  R       +YS+W     + +KN G RID+   SP+    
Sbjct: 253 PHERAWLDHIYDELGYVDTFRVVRKDADIYSWWSNRGQARAKNVGWRIDYHACSPDWKKR 312

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             +A +       +  SDH PVI+   +
Sbjct: 313 TLNAWVYKD----SWFSDHAPVIIDYQL 336


>gi|260808574|ref|XP_002599082.1| hypothetical protein BRAFLDRAFT_225146 [Branchiostoma floridae]
 gi|229284358|gb|EEN55094.1| hypothetical protein BRAFLDRAFT_225146 [Branchiostoma floridae]
          Length = 272

 Score =  161 bits (406), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 71/263 (26%), Positives = 117/263 (44%), Gaps = 17/263 (6%)

Query: 4   VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ----SLNYHIE 58
           + +A+WNV+ +R     N  A+I + +PDIICLQETK  +K+ P E          Y   
Sbjct: 14  LKIASWNVDGLRGTVKKNGHAYIPQEDPDIICLQETKCTEKDVPKEFTATVEGYHGYWYS 73

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
              +K Y G A+LSK +PI++   +  D+ D + R I A F        +   Y+P+   
Sbjct: 74  PTEKKGYAGTALLSKTKPIKVTYGIGVDEHDDEGRVITAEFD----DFYMVTAYVPNAG- 128

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT-- 176
               + D + +W + F  +  + L+ ++P++  GD N+     D  NP   +N       
Sbjct: 129 RGLVRLDYRGTWDEAFTAYLKK-LDKKKPVVLCGDLNVAHNEIDLKNPKGNKNKTPGFTD 187

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
            E       L             +    Y+FW Y   + +KN G R+D+ +LS      L
Sbjct: 188 KEREGFTTLLDEGFKDSYRELYPEETDCYTFWSYMGGARAKNVGWRLDYFVLSDRLMPQL 247

Query: 237 HSARIDTKPRGWTKPSDHTPVIV 259
               I ++  G    SDH P+++
Sbjct: 248 CDNVIRSEVMG----SDHCPIVL 266


>gi|221069494|ref|ZP_03545599.1| exodeoxyribonuclease III Xth [Comamonas testosteroni KF-1]
 gi|220714517|gb|EED69885.1| exodeoxyribonuclease III Xth [Comamonas testosteroni KF-1]
          Length = 271

 Score =  161 bits (406), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 64/272 (23%), Positives = 115/272 (42%), Gaps = 16/272 (5%)

Query: 2   SVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFP--FETLQSLNYHIE 58
           S+  + + N+N IR+       AWI+   PD IC+QE K +  +    FE L  +  +  
Sbjct: 4   SLFKLTSLNLNGIRSATTKGAEAWIEATAPDCICVQEIKAQASDMAGRFEVLAGMKGYFH 63

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
              +K Y+GV + ++++P ++V     D+ D + R++E  F   T+ L + + Y P G+ 
Sbjct: 64  FAEKKGYSGVGVYTRHEPSDVVVGFDIDEFDAEGRYVETRFDTPTRKLSVISAYFPSGSS 123

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
                  +        +      L+ E   +  GD NI  Q  D  N    + ++ F  E
Sbjct: 124 GELR--QEAKFRFLAKMHSHLMHLKAERDFVLCGDINIAHQQADLKNWRGNQKNSGFLPE 181

Query: 179 VRQSFQKLQNMGFTD-------AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
            R    KL +             +     T   Y++W     +++ N G R+D+ + +P 
Sbjct: 182 ERDWMTKLLHKTEISGGLVDVYRLLQPDTTDACYTWWSNRGQAYANNVGWRLDYHLATPA 241

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             +L  +  I        K SDH P+ +  D+
Sbjct: 242 VAALARTESIYK----GEKFSDHAPITIGYDL 269


>gi|299768386|ref|YP_003730412.1| catabolite repression control protein [Acinetobacter sp. DR1]
 gi|298698474|gb|ADI89039.1| catabolite repression control protein [Acinetobacter sp. DR1]
          Length = 274

 Score =  160 bits (405), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 61/268 (22%), Positives = 110/268 (41%), Gaps = 9/268 (3%)

Query: 2   SVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
            ++ V + NVN +R+ +   L  W+++++ D++C+QE++   + +  E  +   +H    
Sbjct: 12  KILRVVSINVNGLRSSVTKGLLEWLEQSDADVVCMQESRITHEQWT-EKFRPEGWHTHLF 70

Query: 61  GQKS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
             +   Y G AI S+   + +   L  +  D Q RFI A F +                 
Sbjct: 71  PAERAGYAGTAIYSRLPFVSVKDGLGFELADSQGRFISAEFDLGLSHPVHIASLYLPSGS 130

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL- 177
                   K  ++  + +   Q  +  + +I  GDYNI+ +  D  N    +  +     
Sbjct: 131 SGEEAQARKDLFLGEYAKILKQWRDENKSVIICGDYNIVHKRIDIKNWSGNQKSSGCLPH 190

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
           E          +G+ D  R       LYS+W     + +KN G RID+   SP+  + + 
Sbjct: 191 ERAWLDHIYDELGYVDTFRVVRAEAELYSWWSNRGQARAKNVGWRIDYQACSPDWKTRVA 250

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           +A +          SDH PVI+   I E
Sbjct: 251 NAWVFKD----QWFSDHAPVIIDYKIQE 274


>gi|226305494|ref|YP_002765454.1| exodeoxyribonuclease [Rhodococcus erythropolis PR4]
 gi|226184611|dbj|BAH32715.1| putative exodeoxyribonuclease [Rhodococcus erythropolis PR4]
          Length = 278

 Score =  160 bits (405), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 67/268 (25%), Positives = 112/268 (41%), Gaps = 15/268 (5%)

Query: 5   TVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNF--PFETLQSLNYHIETCG 61
           T+ + NVN +RA     +  W+++ + D ICLQET+  D       E      + + +  
Sbjct: 14  TITSVNVNGVRAAARKGMLDWLEKTSADFICLQETRASDDQLRETLEPALGNGWFLVSAE 73

Query: 62  Q--KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
              K  NGVA+LS+ +P  +      D+     R+IEA F      L + +LYLP G  +
Sbjct: 74  PSAKGRNGVAVLSRTEPDAVRIGHGDDEFLDAGRYIEADFA----DLTVASLYLPSGEAL 129

Query: 120 TSTKYD---DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
           T  + +      S+       A+     +  ++ +GD+NI     D  N    +  + F 
Sbjct: 130 TPKQEEKERFMASFAVHLATTAAAAEAADRHVVVSGDWNIAHTELDLKNWKTNKKSSGFL 189

Query: 177 LEVRQSFQ--KLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
            E R        ++  + D  R  H      YS+W Y   ++  + G RID+ + +    
Sbjct: 190 SEERAWMDLLFAEDSAWVDVFRTLHPGVDGPYSWWSYRGKAFDNDSGWRIDYQVATRGYA 249

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSL 261
                A ++       + SDH PV VS 
Sbjct: 250 ERAKVALVERAESYDLRWSDHAPVTVSY 277


>gi|326573473|gb|EGE23441.1| catabolite repression control protein [Moraxella catarrhalis
           101P30B1]
          Length = 336

 Score =  160 bits (405), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 64/268 (23%), Positives = 110/268 (41%), Gaps = 12/268 (4%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE--T 59
           V+ V + NVN +RA        W+  +N D++C+QE++   + +  +  +   +H     
Sbjct: 74  VLRVVSINVNGLRAAEKKGFFEWLAVSNADVVCIQESRITHEQWT-DKFRPKGWHTHLFA 132

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL---YLPHG 116
             +  Y GVAI S+   + +V  L  D  D Q RFI A F ++ Q +             
Sbjct: 133 AQKAGYAGVAIYSRLPFVSVVDGLGFDLADSQGRFICAQFDLSAQGIDHPVYIASLYLPS 192

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
                     K  +++++     Q  +  + LI  GDYNI+ +  D  N    +  +   
Sbjct: 193 GSSGEEAQARKDLFLEKYRHILKQWRDENKSLIVCGDYNIVHKRIDIKNWSGNQKASGCL 252

Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
             E          +G+ D  R       +YS+W     + +KN G RID+   SP+    
Sbjct: 253 PHERAWLDHIYDELGYVDTFRVVRKDADIYSWWSNRGQARAKNVGWRIDYHACSPDWKKR 312

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             +A +       +  SDH PVI+   +
Sbjct: 313 TLNAWVYKD----SWFSDHAPVIIDYQL 336


>gi|282852873|ref|ZP_06262214.1| exodeoxyribonuclease III [Lactobacillus gasseri 224-1]
 gi|282555981|gb|EFB61602.1| exodeoxyribonuclease III [Lactobacillus gasseri 224-1]
          Length = 254

 Score =  160 bits (405), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 66/261 (25%), Positives = 109/261 (41%), Gaps = 12/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA + H       + + DI  +Q+T+ E      + L     +     +
Sbjct: 1   MKFMSWNVNGLRAALRHGFVNTFTDLDADIFAIQDTRVEPNEVQID-LPGYYQYWNYAKR 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y G A+ +K +PI +       ++D + R I   F+       I       G  +   
Sbjct: 60  KGYAGTAVFTKEKPITVANGFGVPEVDGEGRSITLEFSNFYF---IDVQVPFSGEKLQRL 116

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
            + +  +   R        L   +P+I  GD ++     D   P      A FT   R+ 
Sbjct: 117 DFRELWAQTFRNYVTK---LMQYKPVIIGGDMSVAHDKIDLAEPDDNHRHAGFTGIERKE 173

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F +L N GF D  R  H     Y++W Y  D+ +KN G R+D+ ++S      + +A+I 
Sbjct: 174 FSELLNAGFIDTFRYFHPDEAKYTYWSYREDARAKNIGWRLDYFLVSNNLEDKMINAQIL 233

Query: 243 TKPRGWTKPSDHTPVIVSLDI 263
               G    SDH P+ + LDI
Sbjct: 234 NNIMG----SDHCPIELDLDI 250


>gi|325962565|ref|YP_004240471.1| exodeoxyribonuclease III [Arthrobacter phenanthrenivorans Sphe3]
 gi|323468652|gb|ADX72337.1| exodeoxyribonuclease III [Arthrobacter phenanthrenivorans Sphe3]
          Length = 273

 Score =  160 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 62/269 (23%), Positives = 107/269 (39%), Gaps = 10/269 (3%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + +A+ NVN +RA     +AAW++    DI+CLQE +  D           +        
Sbjct: 6   LRIASVNVNGLRAAFKNGMAAWLEPREVDILCLQEVRAPDAIVRQLLGDGWHILHSEAEA 65

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT-----QTLRIGNLYLPHGN 117
           K   GVAI S+ +P+     +  D      R++EA F +         L + + Y+  G 
Sbjct: 66  KGRAGVAIASREEPLATRDGIGDDYFATAGRWVEADFRLTDSAGERVQLTVASAYVHSGE 125

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
            + + K DDK  ++        +  +  +  +  GD N+   P D  N       A    
Sbjct: 126 -VGTPKQDDKFRFLDVMTTRLPELSKHSDHALVVGDLNVAHTPLDIRNSKGNVKKAGHLP 184

Query: 178 EVRQSFQKLQNMGFTDAIRATH---DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
           E R  F +             +        Y++W     ++  + G RID+ + +P   +
Sbjct: 185 EERAYFDRFFGEEIGWHDVHRNLAGQVDGPYTWWSQRGKAFDNDTGWRIDYHLATPALAA 244

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              SA +D  P   T+ SDH P++V   +
Sbjct: 245 SAISAVVDRAPSWDTRFSDHAPLVVDYQL 273


>gi|23335380|ref|ZP_00120616.1| COG0708: Exonuclease III [Bifidobacterium longum DJO10A]
 gi|189439121|ref|YP_001954202.1| exonuclease III [Bifidobacterium longum DJO10A]
 gi|239621234|ref|ZP_04664265.1| exodeoxyribonuclease III [Bifidobacterium longum subsp. infantis
           CCUG 52486]
 gi|189427556|gb|ACD97704.1| Exonuclease III [Bifidobacterium longum DJO10A]
 gi|239515695|gb|EEQ55562.1| exodeoxyribonuclease III [Bifidobacterium longum subsp. infantis
           CCUG 52486]
          Length = 286

 Score =  160 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 63/286 (22%), Positives = 105/286 (36%), Gaps = 26/286 (9%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI---- 57
            +T+ T NVN IRA     +  W  ++ PD+ C+QE +    +          +      
Sbjct: 2   TITITTSNVNGIRAAKRKGIEDWAGKHAPDVWCIQEVRAPQDDVDS-IFDEFGFEYATAG 60

Query: 58  ------------ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR--FIEATFTINT 103
                       E C  K   GV +L+  + ++    LPG   DV +         T   
Sbjct: 61  KIEAPANLHAMNEVCRVKGRAGVGLLTDLEVLDKRYGLPGLSEDVDSGRWIETDVKTPEG 120

Query: 104 QTLRIGNLYLPHGNP----ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159
             + + ++Y+  GN         KY    + +KR      +     +  +  GD+NI   
Sbjct: 121 YAITVASVYVHAGNTDYPTKMEQKYRFLDTMLKRMGALRDEAAHGGKQAVLCGDFNIAHT 180

Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSWSK 217
           P D  N    E  A F  E R    K  +      +  +   D    Y++W     ++  
Sbjct: 181 PLDIKNAKANEKHAGFLPEERAYVDKWLDEYEFVDVMRSLAGDIQGPYTWWSQRGRAFDN 240

Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           N G RID+   +PE         ID  P    + SDH P+ ++ ++
Sbjct: 241 NVGWRIDYQFATPELAETARGFVIDKAPTYDKRWSDHAPLTITYEV 286


>gi|153006976|ref|YP_001381301.1| exodeoxyribonuclease III Xth [Anaeromyxobacter sp. Fw109-5]
 gi|152030549|gb|ABS28317.1| exodeoxyribonuclease III Xth [Anaeromyxobacter sp. Fw109-5]
          Length = 248

 Score =  160 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 61/259 (23%), Positives = 107/259 (41%), Gaps = 13/259 (5%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + TWNVN IRAR   +A WI   +PD++CLQE K      P    +   Y     G  
Sbjct: 1   MKIGTWNVNGIRAREAQVAEWIAREHPDVVCLQEIKAPPARVPPSLCELEGYWCLWHGAT 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +Y+GV +  + +           D D++ R   A        + + ++Y+P+G       
Sbjct: 61  AYSGVGLHVRRELAAERPAFTHPDFDLETRIAVAEVAG----VTVASVYVPNGGKD---- 112

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ +++   R+         PL+ AGD N+     D +             + R  F
Sbjct: 113 YPAKLRFLEALDRWVEAACAAGRPLVVAGDLNVARTDQDVHPKERKAGAIGQRPDERAVF 172

Query: 184 QKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           +++ + G  D  RA       L+++W  + +   +N G RID++++S           + 
Sbjct: 173 ERILSHGLVDLGRAMDPTNEGLFTYWAPWRNLRQRNIGWRIDYVLVSAALARRATRCAVL 232

Query: 243 TKPRGWTKPSDHTPVIVSL 261
                    SDH P++  L
Sbjct: 233 AD----FGTSDHAPLVAEL 247


>gi|302783529|ref|XP_002973537.1| hypothetical protein SELMODRAFT_99746 [Selaginella moellendorffii]
 gi|300158575|gb|EFJ25197.1| hypothetical protein SELMODRAFT_99746 [Selaginella moellendorffii]
          Length = 306

 Score =  160 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 61/274 (22%), Positives = 112/274 (40%), Gaps = 25/274 (9%)

Query: 2   SVVTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFETLQ 51
           ++V V +WNVN +RA +            LA      + D++CLQETK ++K+      +
Sbjct: 36  NLVKVISWNVNGLRACMKRKNELEEEGSALARLADSEDFDVLCLQETKLQEKDVEAIKQK 95

Query: 52  SLNYHIETCG-----QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
            L  +  +       +  Y+G A++S+ +P+ +   L     D + R + A F       
Sbjct: 96  ILGGYSNSFWTCSTSKLGYSGCALISRIKPLSVTYGLGISQHDGEGRVVTAEFDTF---F 152

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
            +       G  +       + +            LE  +P+I  GD N   +  D Y+P
Sbjct: 153 LVSVYVPNSGQRLER--LTYRTTEWDPAFSTYLLELEKRKPVIVTGDLNCAHEEIDIYDP 210

Query: 167 IIWENDACFT-LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225
              +  A FT  E         + G  D  R  H     +++W Y +++  +NKG R+D+
Sbjct: 211 DGNKRSAGFTSEERTSFQTNFIDKGLVDTFRKQHPLAVGFTYWSYRSNARPQNKGWRLDY 270

Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
            ++S      +  + +  +  G    SDH P+ +
Sbjct: 271 FLVSQGLVCSVADSYVLPQLDG----SDHCPIGL 300


>gi|157828223|ref|YP_001494465.1| exodeoxyribonuclease III [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|157800704|gb|ABV75957.1| exodeoxyribonuclease III [Rickettsia rickettsii str. 'Sheila
           Smith']
          Length = 271

 Score =  160 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 78/269 (28%), Positives = 122/269 (45%), Gaps = 7/269 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62
           + + TWN+NS+R RI  L     E+ PDII LQETK  D  FP E ++++ Y H+   GQ
Sbjct: 1   MQIVTWNINSLRLRIDLLRKLAYEHQPDIILLQETKVADSLFPLEVIKNIGYEHVIYSGQ 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           KSYNGVAI+SK+    + +    +        +     I+   +          +   +T
Sbjct: 61  KSYNGVAIISKFPLNNVFSLELYNSDKRHIAAMVNDIEIHNFYV---PAGGDIPDIEVNT 117

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           K+  K+ +I+    + +      + +I  GD NI P  HD ++     N    T   R  
Sbjct: 118 KFKHKLEYIRLMQEWLTTNRTKNDKMIIVGDLNIAPHEHDVWSSKQLRNVISHTDIERSL 177

Query: 183 FQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLLHSA 239
             +LQN       +          Y++W Y    W K N+G R+DHI +S      L S 
Sbjct: 178 LVELQNALGFIDSSRHFVSLDEKFYTWWSYRNIDWKKSNRGRRLDHIWVSDNLKGALFSM 237

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268
            + ++ R W  PSDH P  V+ ++    +
Sbjct: 238 HLLSEARDWFSPSDHVPYFVTFNLQMSSR 266


>gi|254457926|ref|ZP_05071353.1| exodeoxyribonuclease III [Campylobacterales bacterium GD 1]
 gi|207085319|gb|EDZ62604.1| exodeoxyribonuclease III [Campylobacterales bacterium GD 1]
          Length = 249

 Score =  160 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 66/256 (25%), Positives = 96/256 (37%), Gaps = 14/256 (5%)

Query: 12  NSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETCGQKSYNGV 68
           N +RA        WI E  PDI+CLQE K  +   P +  +       + +  +K Y+G 
Sbjct: 4   NGVRAVANKEALKWIDERQPDILCLQEIKALEDQIPKDMFEKEYQDIIVNSAIKKGYSGT 63

Query: 69  AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKI 128
              S  Q     T L  D +            I    +   N            +   K+
Sbjct: 64  MTWSILQNSYNSTCLDIDTMGEGRIVETHYDDIVLFNVYFPN------GQKDEERLAYKM 117

Query: 129 SWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN 188
            +   FL +  +  E  + +I  GD N   +  D  NP      + F    R+   KL N
Sbjct: 118 KFYDDFLDYCEKLRENGKSIIICGDVNTAHKEIDLKNPKANSKTSGFLPIEREWMDKLVN 177

Query: 189 MGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRG 247
            G+ D  R  +      YS+W Y + +  KN G RID+  +S +    L  A I     G
Sbjct: 178 HGYIDTFRYVNGDEIDRYSWWSYRSGARLKNVGWRIDYFFISEDLAENLEDAFILDYIEG 237

Query: 248 WTKPSDHTPVIVSLDI 263
               SDH PV + L I
Sbjct: 238 ----SDHCPVGIKLSI 249


>gi|315636243|ref|ZP_07891495.1| exodeoxyribonuclease III [Arcobacter butzleri JV22]
 gi|315479452|gb|EFU70133.1| exodeoxyribonuclease III [Arcobacter butzleri JV22]
          Length = 262

 Score =  160 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 63/261 (24%), Positives = 102/261 (39%), Gaps = 8/261 (3%)

Query: 5   TVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETL-QSLNYHIETCGQ 62
              +WNVN IRA    +   WI E   D++ +QETK+     P     +       +   
Sbjct: 6   KFISWNVNGIRAVDKKDALKWIDEIEVDLLGVQETKSMKDQIPKTIFSKEFKTLFASASA 65

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
                   L         +     D+  + R  E  F +  + +   N+Y P+G   +  
Sbjct: 66  IKGRSGTALFSDIEPTFQSICESVDILDEGRINEIHFNLADKNIAFFNVYFPNGQ-SSQE 124

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           + D K+ +  RFL       +  + +I  GD N      D   P   EN + F    R  
Sbjct: 125 RLDYKMEFYDRFLNHCENLKKDGKSIIVCGDVNTAHTEIDIARPKANENTSGFLQMERDW 184

Query: 183 FQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             K  + G+ D  R  + D    YS+W Y A++ + N G RID+  +S +    +  A I
Sbjct: 185 ITKFLSHGYIDTFRLINGDIKDKYSWWSYRANARANNVGWRIDYFYVSSDLKDYVKDAYI 244

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
                G    SDH P+ + ++
Sbjct: 245 LDNIEG----SDHCPIGLEME 261


>gi|148225041|ref|NP_001085229.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Xenopus
           laevis]
 gi|47937489|gb|AAH72056.1| MGC78928 protein [Xenopus laevis]
          Length = 316

 Score =  160 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 73/263 (27%), Positives = 120/263 (45%), Gaps = 16/263 (6%)

Query: 3   VVTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQ----SLNYHI 57
            + +++WNV+ IRA I      W++E +P I+CLQE K  +K  P +          Y  
Sbjct: 60  TLKISSWNVDGIRAWIKKQGLNWVREEDPHIMCLQEIKCAEKLLPPDVKDMPEYPHKYWA 119

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
               ++ Y+GVA+L K +P+ +   +  ++ D + R I A F                 +
Sbjct: 120 CPDEKEGYSGVAMLCKDKPLNVTYGIGIEEHDKEGRVITAEFDSF-----FVIAAYIPNS 174

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
                + D +  W   F  +    L+ ++PLI  GD N+  Q  D  NP   +    FT 
Sbjct: 175 SRGLVRLDYRQRWDVDFRAYLKG-LDSKKPLILCGDLNVAHQEIDLKNPKTNKKTPGFTP 233

Query: 178 EVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
           + RQ F +L   G+ D+ R  +      Y+FW Y  ++ +KN G R+D+ +LS      L
Sbjct: 234 QERQGFGELLAEGYLDSFRELYPDKPSAYTFWTYMMNARAKNVGWRLDYFVLSKALRPAL 293

Query: 237 HSARIDTKPRGWTKPSDHTPVIV 259
              +I +K  G    SDH P+ +
Sbjct: 294 CDCKIRSKVMG----SDHCPITL 312


>gi|291457695|ref|ZP_06597085.1| exodeoxyribonuclease III [Bifidobacterium breve DSM 20213]
 gi|291380748|gb|EFE88266.1| exodeoxyribonuclease III [Bifidobacterium breve DSM 20213]
          Length = 286

 Score =  160 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 63/286 (22%), Positives = 105/286 (36%), Gaps = 26/286 (9%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI---- 57
            +T+ T NVN IRA     +  W  ++ PD+ C+QE +    +          +      
Sbjct: 2   TITITTSNVNGIRAAKRKGIEDWAGKHAPDVWCMQEVRAPQDDVDS-IFDEFGFEYATAG 60

Query: 58  ------------ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR--FIEATFTINT 103
                       E C  K   GV +L+  + ++    LPG   DV +         T   
Sbjct: 61  KIDAPADLHTMNEVCRVKGRAGVGLLTDLEVLDKRYGLPGLSEDVDSGRWIETDVKTPEG 120

Query: 104 QTLRIGNLYLPHGNPITS----TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159
            T+ + ++Y+  GN         KY    + + R      +     +  +  GD+NI   
Sbjct: 121 YTITVASVYIHAGNTDDPTKMEQKYRFLDTMLARMGALRDEAAHGGKQAVLCGDFNIAHT 180

Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSWSK 217
           P D  N    E  A F  E R    K  +      +  +   D    Y++W     ++  
Sbjct: 181 PLDIKNAKANEKHAGFLPEERAYVDKWLDEYEFVDVMRSLAGDIQGPYTWWSQRGRAFDN 240

Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           N G RID+   +PE         ID  P    + SDH P+ ++ ++
Sbjct: 241 NVGWRIDYQFATPELAETARGFVIDKAPTYDKRWSDHAPLTITYEV 286


>gi|323144610|ref|ZP_08079198.1| exodeoxyribonuclease III [Succinatimonas hippei YIT 12066]
 gi|322415619|gb|EFY06365.1| exodeoxyribonuclease III [Succinatimonas hippei YIT 12066]
          Length = 268

 Score =  160 bits (404), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 71/270 (26%), Positives = 105/270 (38%), Gaps = 22/270 (8%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET--- 59
           + +A+WNVN IRA        W  +   D+I LQETK   +  P      + YH      
Sbjct: 3   IKLASWNVNGIRAVSAKEDWKWFSDCGYDVISLQETKASVEQMPESITDPVGYHAYFASS 62

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN-- 117
             +K Y+G A+ SK +P+     LP  +   + R +   F          N Y P+G   
Sbjct: 63  IVKKGYSGTAVFSKKEPLSHEIELPDPEFQGEGRIVHLEFE----KFHFFNGYFPNGGAD 118

Query: 118 -------PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170
                  P    K               +Q+L   +P++  GD+NI     D   P    
Sbjct: 119 ILDESGKPTGEFKRVPYKMAFFDSFFKYAQKLRESKPIVVCGDFNIAHNEIDLARPKTNV 178

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
            +  F    R    K    G+ D  R  H D    Y++W Y   + +KN G RID+  +S
Sbjct: 179 KNTGFLPLERAFLDKFVAAGYIDTFRFVHGDLKDQYTWWSYKTRARAKNVGWRIDYFFVS 238

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
            E    +  A I+    G    SDH P+ +
Sbjct: 239 EELKENIKDAWIENDVFG----SDHCPIGL 264


>gi|23008040|ref|ZP_00049649.1| COG0708: Exonuclease III [Magnetospirillum magnetotacticum MS-1]
          Length = 237

 Score =  159 bits (403), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 67/237 (28%), Positives = 110/237 (46%), Gaps = 3/237 (1%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           M  V +ATWN+NS+RAR+    A+++    D++ LQETK  D  FP    ++  Y +   
Sbjct: 1   MGPVRLATWNINSVRARVDRAVAFLERTGTDVLALQETKCTDAQFPVAPFEAAGYEVAHV 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           G   +NGVA++S+    ++ T  PG           A        +R+ +LY+PHG  + 
Sbjct: 61  GVNQWNGVAVVSRVGLDDVETSFPGQPAFGDKVEARALGATCG-GVRVWSLYVPHGREVG 119

Query: 121 STKYDDKISWIKRFLRFASQRLELEE--PLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
              Y  K+ W+      A+  L  +    +   GD+N+ P   D ++   +      T  
Sbjct: 120 DPHYAYKLRWLDELRAQAAGWLAADPAAQVALVGDWNVAPLDTDVWDVAYFAGKTHVTPA 179

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            R +F      G+T+  R        Y++WDY    + +N+G+RID   LSP A + 
Sbjct: 180 ERDAFAAFGAAGYTEVTREAIPAERTYTYWDYQRLRFPRNEGMRIDFAYLSPAAHAR 236


>gi|260550183|ref|ZP_05824396.1| catabolite repression control protein [Acinetobacter sp. RUH2624]
 gi|260406711|gb|EEX00191.1| catabolite repression control protein [Acinetobacter sp. RUH2624]
          Length = 280

 Score =  159 bits (403), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 61/268 (22%), Positives = 109/268 (40%), Gaps = 9/268 (3%)

Query: 2   SVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
            ++ V + NVN +R+ +   L  W+++++ D++C+QE++   + +  E  +   +H    
Sbjct: 18  KILRVVSINVNGLRSSVTKGLLEWLEQSDADVVCMQESRITHEQWT-EKFRPEGWHTHLF 76

Query: 61  GQKS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
             +   Y G AI S+   + I   L  +  D Q RFI A F +                 
Sbjct: 77  PAERAGYAGTAIYSRLPFVSIKDGLGFELADSQGRFISAEFDLGLSHPVHIASLYLPSGS 136

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL- 177
                   K  ++  + +   Q  +  + +I  GDYNI+ +  D  N    +  +     
Sbjct: 137 SGEEAQARKDLFLGEYAKILKQWRDENKSIIICGDYNIVHKRIDIKNWSGNQKSSGCLPH 196

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
           E          +G+ D  R       LYS+W     + +KN G RID+   SP+  +   
Sbjct: 197 ERAWLDHIYDELGYVDTFRVVRTEAELYSWWSNRGQARAKNVGWRIDYQACSPDWKARTV 256

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           +A +          SDH PVI+   I +
Sbjct: 257 NAWVYKD----QWFSDHAPVIIDYKIQD 280


>gi|262370848|ref|ZP_06064172.1| catabolite repression control protein [Acinetobacter johnsonii
           SH046]
 gi|262314210|gb|EEY95253.1| catabolite repression control protein [Acinetobacter johnsonii
           SH046]
          Length = 272

 Score =  159 bits (403), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 61/265 (23%), Positives = 109/265 (41%), Gaps = 7/265 (2%)

Query: 2   SVVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFET-LQSLNYHIET 59
            ++ V + NVN +R+     +  WI  ++ D+IC+QE++   + +  +   +  + H+  
Sbjct: 12  KILRVVSINVNGLRSAEKKGIFDWIATSDADVICMQESRITHEQWTNKFKPEGWHTHLFP 71

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +  Y G AI S+   + +   L  +  D Q RFI A F +                  
Sbjct: 72  AERPGYAGTAIYSRLPFVSVTDGLGFELADSQGRFISAEFDLGLDQNVHICSLYLPSGSS 131

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-E 178
                  K  +++ + +   Q  +  + +I  GDYNI+ +  D  N    +  +     E
Sbjct: 132 GEEAQVRKDHFLEEYKQILKQWRDENKSVIVCGDYNIVHKRIDIKNWSGNQKASGCLPHE 191

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
                     +G+ D  R       LYS+W     + +KN G RID+   SP+  +   +
Sbjct: 192 RSWLDHIYDELGYVDTFREVRPEAELYSWWSNRGQARAKNVGWRIDYQACSPDWKARTVN 251

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263
           A +  +    T  SDH PVI+   I
Sbjct: 252 AWVYKE----TWFSDHAPVIIDYKI 272


>gi|296138677|ref|YP_003645920.1| exodeoxyribonuclease III Xth [Tsukamurella paurometabola DSM 20162]
 gi|296026811|gb|ADG77581.1| exodeoxyribonuclease III Xth [Tsukamurella paurometabola DSM 20162]
          Length = 272

 Score =  159 bits (403), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 60/277 (21%), Positives = 104/277 (37%), Gaps = 19/277 (6%)

Query: 4   VTVATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKN----FPFETLQS 52
           + + + NVN IRA +         +  W++E   D++ LQE +   K           + 
Sbjct: 1   MIITSINVNGIRAAVKQRSEENLGMLPWLRETKADVVALQEVRATHKQSLAALAPALDEG 60

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
            +           NGVA+LS+ +P  +       + D   R++EA F      L +G+LY
Sbjct: 61  WHLSAAESSTAGRNGVAVLSRREPDAVRIGFGSAEFDETGRYLEADFG----DLTVGSLY 116

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
           LP G+ + + + D+K  +   F  +           +  GD+NI     D  N      +
Sbjct: 117 LPSGD-VGTERQDEKDRFRAEFGEYLGTLGRRRRKAVVCGDWNIGHTELDIKNWKGNVKN 175

Query: 173 ACFTLEVRQSFQKLQNM---GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
           + F  E R                       T   Y++W +   ++  + G RID  + +
Sbjct: 176 SGFLPEERAWMSTYIGAGRPFTDVVRELHPGTPGPYAWWSWRGKAFDNDSGWRIDLQIAN 235

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEP 266
                   +AR++       + SDH PV V      P
Sbjct: 236 NALAQHATAARVERAEAYSLRWSDHAPVTVEYSCDMP 272


>gi|326388588|ref|ZP_08210181.1| exodeoxyribonuclease III [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326206839|gb|EGD57663.1| exodeoxyribonuclease III [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 261

 Score =  159 bits (403), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 68/259 (26%), Positives = 111/259 (42%), Gaps = 6/259 (2%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCG 61
           ++ +ATWN+NS+R RI  +  ++ +  PD++CLQE K  +  FP E  + L Y H+   G
Sbjct: 1   MIEIATWNINSVRLRIDQVERFLTQEKPDVLCLQEIKCAENLFPREMFERLGYGHMAVSG 60

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           QK Y+GVAI+S+    E        + + +   +E    +              G+    
Sbjct: 61  QKGYHGVAIVSRLPLRETGREDWQANGEARHVGVEI---LGHDLFLDNVYIPAGGDVPDR 117

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
                    +    R       L+ P +  GD+NI P   D Y+          T    +
Sbjct: 118 EANPKFGQKLDFLERMTRWSEGLDRPTLLVGDFNIAPLECDVYDHKALLKVVSHTPVEVE 177

Query: 182 SFQKLQNMGFTDAIRATH--DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           +  +L        +   H       YS+W Y +   +K++G R+DH+  SPE  +     
Sbjct: 178 ALGRLAAAHDWVDLGRKHIPAPERNYSWWSYRSYWRAKDQGRRLDHMWASPEVAARSQGH 237

Query: 240 RIDTKPRGWTKPSDHTPVI 258
           R   + R W +PSDH P+I
Sbjct: 238 RFVEETRRWEQPSDHIPLI 256


>gi|45361461|ref|NP_989307.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Xenopus
           (Silurana) tropicalis]
 gi|39794455|gb|AAH64266.1| hypothetical protein MGC76280 [Xenopus (Silurana) tropicalis]
 gi|51703687|gb|AAH80950.1| hypothetical protein MGC76280 [Xenopus (Silurana) tropicalis]
 gi|89267865|emb|CAJ83004.1| APEX nuclease (multifunctional DNA repair enzyme) 1 [Xenopus
           (Silurana) tropicalis]
          Length = 316

 Score =  159 bits (403), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 73/263 (27%), Positives = 121/263 (46%), Gaps = 16/263 (6%)

Query: 3   VVTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQ----SLNYHI 57
            + +++WNV+ IRA I      W++E +P I+CLQE K  +K  P E          Y  
Sbjct: 60  TLKISSWNVDGIRAWIKKQGLNWVREEDPHIMCLQEIKCAEKLLPPEIKDMPEYPHKYWA 119

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
               ++ Y+GVA+L K +P+ +   +  ++ D + R I A F                 +
Sbjct: 120 CPDEKEGYSGVAMLCKDKPLNVTYGIGIEEHDKEGRVITAEFDSF-----FLIAAYVPNS 174

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
                + D +  W   F  +    L+ ++PLI  GD N+  Q  D  NP   +    FT 
Sbjct: 175 SRGLVRLDYRQRWDVDFRAYLKG-LDSKKPLILCGDLNVAHQEIDLKNPKTNKKTPGFTP 233

Query: 178 EVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
           + RQ F +L   G+ D+ R  +      Y+FW Y  ++ +KN G R+D+ +LS      L
Sbjct: 234 QERQGFGELLAEGYLDSFRELYPDKPSAYTFWTYMMNARAKNVGWRLDYFVLSKALRPAL 293

Query: 237 HSARIDTKPRGWTKPSDHTPVIV 259
             +++ +K  G    SDH P+ +
Sbjct: 294 CDSKVRSKIMG----SDHCPITL 312


>gi|294013493|ref|YP_003546953.1| exodeoxyribonuclease III [Sphingobium japonicum UT26S]
 gi|292676823|dbj|BAI98341.1| exodeoxyribonuclease III [Sphingobium japonicum UT26S]
          Length = 265

 Score =  159 bits (402), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 77/268 (28%), Positives = 126/268 (47%), Gaps = 12/268 (4%)

Query: 1   MS-VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIE 58
           MS  +++A+WN+NS+RAR+  +  ++ E +PDI+CLQETK  +  FP    +   Y H  
Sbjct: 1   MSQTLSIASWNINSVRARLDIVERFLTEESPDILCLQETKVVNDTFPAGLFRQRGYNHQV 60

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
             GQ  ++GVAILSK    E        + + +   +          +RI N+Y+P G  
Sbjct: 61  LNGQPMHHGVAILSKIPIREDDRLDWQANGEARHVGVRLDNG-----VRIENVYVPAGGD 115

Query: 119 ITSTKYDDKISWIKRFLRFASQRLEL--EEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
           +   + + K      FL    Q      ++P I  GD+NI P   D ++     N    T
Sbjct: 116 VPDREVNPKFGQKLDFLERMIQWSSTLEDKPTILTGDFNIAPMECDVWSHKQLLNVVSHT 175

Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDTHHL-YSFWDYYADSW-SKNKGIRIDHIMLSPEAT 233
             E     +  ++  + D  R  +      Y++W Y A  W   ++G R+DH+ ++ +  
Sbjct: 176 PIECEILARLQESNDWVDIGRKFYPAPQRLYTWWSYRARDWAESDRGRRLDHMWMTRDVA 235

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSL 261
               S R+    RGW++PSDH P+I   
Sbjct: 236 EKAVSHRVVEPIRGWSRPSDHVPIITEF 263


>gi|325123873|gb|ADY83396.1| catabolite repression control protein [Acinetobacter calcoaceticus
           PHEA-2]
          Length = 274

 Score =  159 bits (402), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 61/268 (22%), Positives = 109/268 (40%), Gaps = 9/268 (3%)

Query: 2   SVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
            ++ V + NVN +R+ +   L  W+++++ D++C+QE++   + +  E  +   +H    
Sbjct: 12  KILRVVSINVNGLRSSVTKGLLEWLEQSDADVVCMQESRITHEQWT-EKFRPEGWHTHLF 70

Query: 61  GQKS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
             +   Y G AI S+   + +   L  +  D Q RFI A F +                 
Sbjct: 71  PAERAGYAGTAIYSRLPFVSVKDGLGFELADSQGRFISAEFDLGLSHPVHIASLYLPSGS 130

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL- 177
                   K  ++  + +   Q  +  + +I  GDYNI+ +  D  N    +  +     
Sbjct: 131 SGEEAQARKDLFLGEYAKILKQWRDENKSVIICGDYNIVHKRIDIKNWSGNQKSSGCLPH 190

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
           E          +G+ D  R       LYS+W     + +KN G RID+   SP+  +   
Sbjct: 191 ERAWLDHIYDELGYVDTFRVVRTEAELYSWWSNRGQARAKNVGWRIDYHACSPDWKARTI 250

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           +A +          SDH PVI+   I E
Sbjct: 251 NAWVYKD----QWFSDHAPVIIDYKIQE 274


>gi|50954256|ref|YP_061544.1| exodeoxyribonuclease III [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|50950738|gb|AAT88439.1| exodeoxyribonuclease III [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 278

 Score =  159 bits (402), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 56/274 (20%), Positives = 104/274 (37%), Gaps = 15/274 (5%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + VAT NVN IRA     +  W+   + DI+ +QE +    +         +   +    
Sbjct: 6   LRVATINVNGIRAAFRRGMGTWLDARDVDILAIQEVRASTDDLLGLLGDEWDILHDPATA 65

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K   GVAI S+ + +     L     D   R++EA + +  + + + + Y+  G    + 
Sbjct: 66  KGRAGVAIASRRRAVVHRAGLGPAGFDSAGRWLEADYEVGGKAITVVSAYVHSGE-AGTP 124

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           K  DK +++              E  +  GD N+  +  D  N       A F  E R  
Sbjct: 125 KQADKYTFLDAVEARLPVLAAHSEHGVVLGDLNVGHRTLDIRNWRGNVKRAGFLPEERAY 184

Query: 183 FQKLQN-------------MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
           F ++                      +   +    Y++W +   ++  + G RID+ + +
Sbjct: 185 FDRILGAEDEPGYNDGAGLGWVDVGRKWAGEVDGPYTWWTWRGQAFDNDTGWRIDYQLAT 244

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           P   + +    +D       + SDHTPV+V   +
Sbjct: 245 PALAATVTDYSVDRAASYAERWSDHTPVVVDYAL 278


>gi|184159856|ref|YP_001848195.1| exonuclease III [Acinetobacter baumannii ACICU]
 gi|213159082|ref|YP_002321080.1| exodeoxyribonuclease III [Acinetobacter baumannii AB0057]
 gi|215481899|ref|YP_002324081.1| exodeoxyribonuclease III [Acinetobacter baumannii AB307-0294]
 gi|239503819|ref|ZP_04663129.1| catabolite repression control protein [Acinetobacter baumannii
           AB900]
 gi|294836682|ref|ZP_06781365.1| catabolite repression control protein [Acinetobacter sp. 6013113]
 gi|294841525|ref|ZP_06786208.1| catabolite repression control protein [Acinetobacter sp. 6014059]
 gi|294860364|ref|ZP_06798133.1| catabolite repression control protein [Acinetobacter sp. 6013150]
 gi|301347005|ref|ZP_07227746.1| catabolite repression control protein [Acinetobacter baumannii
           AB056]
 gi|301510728|ref|ZP_07235965.1| catabolite repression control protein [Acinetobacter baumannii
           AB058]
 gi|301597923|ref|ZP_07242931.1| catabolite repression control protein [Acinetobacter baumannii
           AB059]
 gi|183211450|gb|ACC58848.1| Exonuclease III [Acinetobacter baumannii ACICU]
 gi|193078676|gb|ABO13730.2| catabolite repression control protein [Acinetobacter baumannii ATCC
           17978]
 gi|213058242|gb|ACJ43144.1| exodeoxyribonuclease III [Acinetobacter baumannii AB0057]
 gi|213986663|gb|ACJ56962.1| exodeoxyribonuclease III [Acinetobacter baumannii AB307-0294]
 gi|322509770|gb|ADX05224.1| exonuclease III [Acinetobacter baumannii 1656-2]
 gi|323519783|gb|ADX94164.1| catabolite repression control protein [Acinetobacter baumannii
           TCDC-AB0715]
          Length = 274

 Score =  159 bits (402), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 62/268 (23%), Positives = 109/268 (40%), Gaps = 9/268 (3%)

Query: 2   SVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
            ++ V + NVN +R+ +   L  W+++++ D++C+QE++   + +  E  +   +H    
Sbjct: 12  KILRVVSINVNGLRSSVTKGLLEWLEQSDADVVCMQESRITHEQWT-EKFRPEGWHTHLF 70

Query: 61  GQKS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
             +   Y G AI S+   + I   L  +  D Q RFI A F +                 
Sbjct: 71  PAERAGYAGTAIYSRLPFVSIKDGLGFELADSQGRFISAEFDLGLSHPVHIASLYLPSGS 130

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL- 177
                   K  ++  + +   Q  +  + +I  GDYNI+ +  D  N    +  +     
Sbjct: 131 SGEEAQARKDLFLGEYAKILKQWRDENKSIIICGDYNIVHKRIDIKNWSGNQKSSGCLPH 190

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
           E          +G+ D  R       LYS+W     + +KN G RID+   SP+  +   
Sbjct: 191 ERAWLDHIYDELGYVDTFRVVRTEAELYSWWSNRGQARAKNVGWRIDYHACSPDWKARTV 250

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           +A +          SDH PVI+   I E
Sbjct: 251 NAWVYKD----QWFSDHAPVIIDYKIQE 274


>gi|319442381|ref|ZP_07991537.1| exodeoxyribonuclease III [Corynebacterium variabile DSM 44702]
          Length = 259

 Score =  159 bits (402), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 77/263 (29%), Positives = 119/263 (45%), Gaps = 18/263 (6%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + VATWN+NS+R R   +  ++  ++ D++CLQETK  D  FP        Y     G  
Sbjct: 1   MRVATWNINSVRTREARVRDFLSRSDVDVLCLQETKCTDAQFP--DFSDTGYEQAHHGLG 58

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF----TINTQTLRIGNLYLPHGNPI 119
           S+NGVA+LS+    E+ T       D      +        +    +R+ +LY+P+G  I
Sbjct: 59  SFNGVAVLSRVGIDEVTTDFGQPGFDKDPAAPQEQEARALGVTCGGVRVWSLYVPNGREI 118

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
           +   Y  K+ ++     +A Q      P +  GD+NI P   D ++P  +      T   
Sbjct: 119 SDRHYTYKLDFLDALASYAEQEH---RPTVVTGDFNITPTDDDVWDPSFFVGKTHVTPRE 175

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML---SPEATSLL 236
           R + + L++ G T+A    H     YS+WDY A  + + +GIRID       +P      
Sbjct: 176 RDALRHLEDAGLTEATATLH---GRYSYWDYQAMRFQRGQGIRIDLQYCRGITPADDP-- 230

Query: 237 HSARIDTKPRGWTKPSDHTPVIV 259
               +D   R     SDH PVIV
Sbjct: 231 -EPWVDVDERRGKGASDHAPVIV 252


>gi|293610563|ref|ZP_06692863.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292826907|gb|EFF85272.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 280

 Score =  159 bits (402), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 61/268 (22%), Positives = 109/268 (40%), Gaps = 9/268 (3%)

Query: 2   SVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
            ++ V + NVN +R+ +   L  W+++++ D++C+QE++   + +  E  +   +H    
Sbjct: 18  KILRVVSINVNGLRSSVTKGLLEWLEQSDADVVCMQESRITHEQWT-EKFRPEGWHTHLF 76

Query: 61  GQKS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
             +   Y G AI S+   + +   L  +  D Q RFI A F +                 
Sbjct: 77  PAERAGYAGTAIYSRLPFVSVKDGLGFELADSQGRFISAEFDLGLSHPVHIASLYLPSGS 136

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL- 177
                   K  ++  + +   Q  +  + +I  GDYNI+ +  D  N    +  +     
Sbjct: 137 SGEEAQARKDLFLGEYAKILKQWRDENKSVIICGDYNIVHKRIDIKNWSGNQKSSGCLPH 196

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
           E          +G+ D  R       LYS+W     + +KN G RID+   SP+  +   
Sbjct: 197 ERAWLDHIYDELGYVDTFRVVRTEAELYSWWSNRGQARAKNVGWRIDYHACSPDWKARTI 256

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           +A +          SDH PVI+   I E
Sbjct: 257 NAWVYKD----QWFSDHAPVIIDYKIQE 280


>gi|262280501|ref|ZP_06058285.1| catabolite repression control protein [Acinetobacter calcoaceticus
           RUH2202]
 gi|262258279|gb|EEY77013.1| catabolite repression control protein [Acinetobacter calcoaceticus
           RUH2202]
          Length = 280

 Score =  159 bits (402), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 61/268 (22%), Positives = 109/268 (40%), Gaps = 9/268 (3%)

Query: 2   SVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
            ++ V + NVN +R+ +   L  W+++++ D++C+QE++   + +  E  +   +H    
Sbjct: 18  KILRVVSINVNGLRSSVTKGLLEWLEQSDADVVCMQESRITHEQWT-EKFRPEGWHTHLF 76

Query: 61  GQKS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
             +   Y G AI S+   + +   L  +  D Q RFI A F +                 
Sbjct: 77  PAERAGYAGTAIYSRLPFVSVKDGLGFELADSQGRFISAEFDLGLSHPVHIASLYLPSGS 136

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL- 177
                   K  ++  + +   Q  +  + +I  GDYNI+ +  D  N    +  +     
Sbjct: 137 SGEEAQARKDLFLGEYAKILKQWRDENKSVIICGDYNIVHKRIDIKNWSGNQKSSGCLPH 196

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
           E          +G+ D  R       LYS+W     + +KN G RID+   SP+  +   
Sbjct: 197 ERAWLDHIYDELGYVDTFRIVRAEAELYSWWSNRGQARAKNVGWRIDYQACSPDWKTRTT 256

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           +A +          SDH PVI+   I E
Sbjct: 257 NAWVFKD----QWFSDHAPVIIDYKIQE 280


>gi|264676398|ref|YP_003276304.1| exodeoxyribonuclease III Xth [Comamonas testosteroni CNB-2]
 gi|262206910|gb|ACY31008.1| exodeoxyribonuclease III Xth [Comamonas testosteroni CNB-2]
          Length = 267

 Score =  159 bits (402), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 60/271 (22%), Positives = 111/271 (40%), Gaps = 16/271 (5%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFP--FETLQSLNYHIET 59
           +  + + N+N IR+       AWI+   PD IC+QE K +  +    FE L  +  +   
Sbjct: 1   MFKLTSLNLNGIRSATTKGAEAWIEATAPDCICVQEIKAQASDMAGRFEVLAGMKGYFHF 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GV + ++++P ++V     ++ D + R++E  F    +   + + Y P G+  
Sbjct: 61  AEKKGYSGVGVYTRHEPSDVVVGFDIEEFDAEGRYVETRFDTPGRKFSVISAYFPSGSSG 120

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                 +        +      L+ E   +  GD NI  Q  D  N    + ++ F  E 
Sbjct: 121 ELR--QEAKFRFLAKMHSHLMHLKAERDFVLCGDINIAHQKEDLKNWRGNQKNSGFLPEE 178

Query: 180 RQSFQKLQNMGFTD-------AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
           R    KL +                   T   Y++W     +++ N G R+D+ + +P  
Sbjct: 179 RDWMSKLLHKTEAGGGLVDVYRQLQPDTTDACYTWWSNRGQAYANNVGWRLDYHLATPAI 238

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            +L  +  I        K SDH P+ +  D+
Sbjct: 239 AALARTESIYK----GEKFSDHAPITIGYDM 265


>gi|169634777|ref|YP_001708513.1| catabolite repression control protein [Acinetobacter baumannii SDF]
 gi|169794343|ref|YP_001712136.1| catabolite repression control protein [Acinetobacter baumannii AYE]
 gi|260557895|ref|ZP_05830108.1| exodeoxyribonuclease III [Acinetobacter baumannii ATCC 19606]
 gi|169147270|emb|CAM85129.1| catabolite repression control protein [Acinetobacter baumannii AYE]
 gi|169153569|emb|CAP02744.1| catabolite repression control protein [Acinetobacter baumannii]
 gi|260408686|gb|EEX01991.1| exodeoxyribonuclease III [Acinetobacter baumannii ATCC 19606]
          Length = 280

 Score =  159 bits (401), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 62/268 (23%), Positives = 109/268 (40%), Gaps = 9/268 (3%)

Query: 2   SVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
            ++ V + NVN +R+ +   L  W+++++ D++C+QE++   + +  E  +   +H    
Sbjct: 18  KILRVVSINVNGLRSSVTKGLLEWLEQSDADVVCMQESRITHEQWT-EKFRPEGWHTHLF 76

Query: 61  GQKS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
             +   Y G AI S+   + I   L  +  D Q RFI A F +                 
Sbjct: 77  PAERAGYAGTAIYSRLPFVSIKDGLGFELADSQGRFISAEFDLGLSHPVHIASLYLPSGS 136

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL- 177
                   K  ++  + +   Q  +  + +I  GDYNI+ +  D  N    +  +     
Sbjct: 137 SGEEAQARKDLFLGEYAKILKQWRDENKSIIICGDYNIVHKRIDIKNWSGNQKSSGCLPH 196

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
           E          +G+ D  R       LYS+W     + +KN G RID+   SP+  +   
Sbjct: 197 ERAWLDHIYDELGYVDTFRVVRTEAELYSWWSNRGQARAKNVGWRIDYHACSPDWKARTV 256

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           +A +          SDH PVI+   I E
Sbjct: 257 NAWVYKD----QWFSDHAPVIIDYKIQE 280


>gi|238022209|ref|ZP_04602635.1| hypothetical protein GCWU000324_02116 [Kingella oralis ATCC 51147]
 gi|237866823|gb|EEP67865.1| hypothetical protein GCWU000324_02116 [Kingella oralis ATCC 51147]
          Length = 257

 Score =  159 bits (401), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 61/263 (23%), Positives = 114/263 (43%), Gaps = 13/263 (4%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETC 60
           + + T NVN IR+        +I ++  DIIC+QE K ++ +   E       H      
Sbjct: 1   MRIITANVNGIRSAYKKGFLDYIAQSQADIICVQELKAQEADLSPEMQAPHGMHGVWHCA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            ++ Y+GVA+ SK QP  +   L   + D + R++ A F   +                 
Sbjct: 61  QKRGYSGVALYSKRQPDAVQIGLGQPEFDSEGRYVRADFGNLSVI-----SLYLPSGTSA 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   K  ++  F    ++ +     ++  GD+NI  Q  D  N    + ++ F  E R
Sbjct: 116 EERQAYKYQFLDAFYPILAELIATGRDIVVCGDWNIAHQNIDIKNWKGNQKNSGFLPEER 175

Query: 181 QSFQKLQ-NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
               ++  ++G+ D  R  +     Y++W     +++K+ G RID+ M +P   +   +A
Sbjct: 176 AWIGRVIADLGWVDTWRTLYPDVAGYTWWSNRGQAYAKDVGWRIDYQMTTPALAATAQAA 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
            +  +    TK SDH P+++  D
Sbjct: 236 HVYKE----TKFSDHAPLVIDYD 254


>gi|28493411|ref|NP_787572.1| exodeoxyribonuclease III [Tropheryma whipplei str. Twist]
 gi|28476452|gb|AAO44541.1| exodeoxyribonuclease III [Tropheryma whipplei str. Twist]
          Length = 285

 Score =  159 bits (401), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 78/281 (27%), Positives = 124/281 (44%), Gaps = 14/281 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           V V TWNVNSIRAR+  + AW+K    D+  LQETK    +FP +  +   Y+ E  G +
Sbjct: 7   VRVGTWNVNSIRARLERVLAWLKNECIDVAALQETKVRTGDFPVDAFRDAGYYSEAHGLR 66

Query: 64  SYNGVAILSKYQPIEIV------THLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
            + GVAI+S++    +            D             +  T  +R+ +LY+P+G 
Sbjct: 67  GFEGVAIVSRFPIRRVTVNIPRAPGFLSDRWGTDIPQEARAISATTGGIRLYSLYVPNGR 126

Query: 118 PITSTKYDDKISWIKRFLRFASQRLE--LEEPLIFAGDYNIIPQPHDCY-NPIIWENDAC 174
            + S  ++ K++W+K         L      PL+  GD+NI+    D         ND  
Sbjct: 127 EVGSPHFEYKLAWLKALASHVRTVLRRTPGIPLMLVGDFNIVTCEQDTADPDFQLPNDIT 186

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
            +   R++FQ + + G  D IR        ++ W Y    +  N+G+RID ++ S     
Sbjct: 187 CSGPEREAFQAILDTGMFDLIRPFAPIG--FTSWSYQRQRFQNNQGLRIDFMLGSDSVQR 244

Query: 235 LLHSARIDTKPRG---WTKPSDHTPVIVSLDIPEPRKKQQD 272
                 ID   R       PSDH P++  +D P    ++ D
Sbjct: 245 RTIWGEIDRVQRRHLFGLTPSDHAPLVSVIDPPRRTFRRDD 285


>gi|299533724|ref|ZP_07047096.1| exodeoxyribonuclease III Xth [Comamonas testosteroni S44]
 gi|298718273|gb|EFI59258.1| exodeoxyribonuclease III Xth [Comamonas testosteroni S44]
          Length = 267

 Score =  159 bits (401), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 61/271 (22%), Positives = 111/271 (40%), Gaps = 16/271 (5%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFP--FETLQSLNYHIET 59
           +  + + N+N IR+       AWI+   PD IC+QE K +  +    FE L  +  +   
Sbjct: 1   MFKLTSLNLNGIRSATTKGAEAWIEATAPDCICVQEIKAQASDMAGRFEVLAGMKGYFHF 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GV + ++++P +++     D+ D + R++E  F    +   I + Y P G+  
Sbjct: 61  AEKKGYSGVGVYTRHEPSDVIVGFDIDEFDAEGRYVETRFDTPGRKFSIISAYFPSGSSG 120

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                 +        +      L+ E   +  GD NI  Q  D  N    + ++ F  E 
Sbjct: 121 ELR--QEAKFRFLAKMHSHLMHLKAERDFVLCGDINIAHQKEDLKNWRGNQKNSGFLPEE 178

Query: 180 RQSFQKLQNMGFTD-------AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
           R    KL +                   T   Y++W     +++ N G R+D+ + +P  
Sbjct: 179 RDWMSKLLHKTEASGGLVDVYRQLQPDTTDACYTWWSNRGQAYANNVGWRLDYHLATPAI 238

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            +L  +  I        K SDH P+ +  D+
Sbjct: 239 AALARTESIYK----GEKFSDHAPITIGYDM 265


>gi|15899057|ref|NP_343662.1| exodeoxyribonuclease [Sulfolobus solfataricus P2]
 gi|284175276|ref|ZP_06389245.1| exodeoxyribonuclease [Sulfolobus solfataricus 98/2]
 gi|13815592|gb|AAK42452.1| Exodeoxyribonuclease [Sulfolobus solfataricus P2]
 gi|261600804|gb|ACX90407.1| exodeoxyribonuclease III Xth [Sulfolobus solfataricus 98/2]
          Length = 247

 Score =  159 bits (401), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 66/261 (25%), Positives = 116/261 (44%), Gaps = 18/261 (6%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + +WN+N +R+ +  NL  +++ N  DI+  QET+    +        + Y + +   
Sbjct: 1   MKIVSWNINGLRSALKKNLVNFLESNTFDIVMFQETR---GDIVPLDFIMMGYEVISFPA 57

Query: 62  -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GV  L+K +PI+++  L   + D + R +            I   +   G+ + 
Sbjct: 58  RRKGYSGVMTLTKIKPIKVIKGLQIKEFDDEGRTVSLELK---DFYLINAYFPRAGDNLE 114

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
              +  K +           +L   +P+I  GD+NI  Q  D             T + R
Sbjct: 115 RLDFKLKFNNGIENF---LLKLREVKPVILCGDFNIAHQSIDAAFSDP--KIPGLTPQER 169

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
             F  L ++GF D  R  H     YS+W Y  ++  KN G+R+D+ ++S E    +  A 
Sbjct: 170 AWFTHLLSLGFIDTFRYLHPNVRKYSWWSYMGNAREKNLGLRLDYCIVSEELKDSIKMAD 229

Query: 241 IDTKPRGWTKPSDHTPVIVSL 261
           I T  +G    SDH P+I+ L
Sbjct: 230 ILTDVQG----SDHAPIILEL 246


>gi|16082631|ref|NP_394956.1| exonuclease III [Thermoplasma acidophilum DSM 1728]
          Length = 250

 Score =  159 bits (401), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 63/260 (24%), Positives = 101/260 (38%), Gaps = 14/260 (5%)

Query: 5   TVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
              +WNVN +RA +     +  K+++   I LQETK +  + P E    L Y++     K
Sbjct: 4   KFLSWNVNGLRAAVKNGAVSVFKQDDYFGIALQETKADSTSVPEEMYH-LGYYLYNNPAK 62

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
                  +S  +   I     G + +                +   N             
Sbjct: 63  KKGYSGTMSLVREKPIDV-SYGFENEEGRILNLEFDKFYFINVYFPNAQHGLTRLDMKLD 121

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +D             S  L  ++PLI  GD+N+  +  D   P   EN+A FT + R   
Sbjct: 122 FD-------EKFLEYSNELRKKKPLIICGDFNVAHEEIDIARPKDNENNAGFTKQERDWM 174

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            K  + G+ D  R        YS+W Y  ++ +KN G RID+ ++S +    +  A I  
Sbjct: 175 TKFLDSGYVDTYRIFMKEGGHYSWWSYRFNARAKNIGWRIDYFVVSDDIRDRVKKAEILE 234

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
              G    SDH PV + +D+
Sbjct: 235 TVTG----SDHAPVTLEVDL 250


>gi|229580822|ref|YP_002839221.1| exodeoxyribonuclease III Xth [Sulfolobus islandicus Y.N.15.51]
 gi|228011538|gb|ACP47299.1| exodeoxyribonuclease III Xth [Sulfolobus islandicus Y.N.15.51]
          Length = 247

 Score =  158 bits (400), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 68/261 (26%), Positives = 111/261 (42%), Gaps = 18/261 (6%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + +WNVN IRA +  NL  +I+ N  ++I  QETK    +        + Y + +   
Sbjct: 1   MKIVSWNVNGIRAALKKNLIDFIENNMFEVIMFQETK---GDIVPLDFIMMGYEVISFPA 57

Query: 62  -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GV  L+K +PI ++  L   + D + R +            I   +   G+ + 
Sbjct: 58  KRKGYSGVMTLTKIKPINVIKGLQIKEFDDEGRTVTLELK---DFYVINAYFPRAGDNLE 114

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
              +  K +            L   +P+I  GD+NI  Q  D             T + R
Sbjct: 115 RLDFKLKFNNEIENFVLK---LRKAKPVILCGDFNIAHQNIDGA--FSNPTIPGLTPQER 169

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
             F    ++GF D  R  H     YS+W Y   +  KN G+R+D+ ++S E    +  A 
Sbjct: 170 SWFSHFLSLGFIDTFRYLHPNVRKYSWWSYMGKARDKNLGLRLDYCIVSEELKDRIKMAD 229

Query: 241 IDTKPRGWTKPSDHTPVIVSL 261
           I    +G    SDH P+I+ L
Sbjct: 230 ILIDIQG----SDHAPIILEL 246


>gi|311064022|ref|YP_003970747.1| exodeoxyribonuclease III [Bifidobacterium bifidum PRL2010]
 gi|310866341|gb|ADP35710.1| Xth Exodeoxyribonuclease III [Bifidobacterium bifidum PRL2010]
          Length = 285

 Score =  158 bits (400), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 63/286 (22%), Positives = 96/286 (33%), Gaps = 26/286 (9%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI---- 57
           ++T+ T NVN IRA     +  W  E+ PDI C+QE +               +      
Sbjct: 1   MITITTSNVNGIRAAKRKGIETWAGEHAPDIWCMQEVRAPQDELDP-IFGEFGFEYATAG 59

Query: 58  ------------ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR--FIEATFTINT 103
                       E C  K   GV +L+          L G D DV +         T   
Sbjct: 60  KIADQSELTAMNEVCRVKGRAGVGLLTDLPVTARRYGLSGLDEDVDSGRWIEADVTTPQG 119

Query: 104 QTLRIGNLYLPHGNPITS----TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159
             + +  +Y+  GN         KY    + + R      +        +  GD+NI   
Sbjct: 120 YGITVACVYVHAGNSDDPVKMAQKYRFLDTMLTRMGELRDEASRGGRQAVLCGDFNIAHT 179

Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSWSK 217
           P D  N       A F    R    +         +  +   D    Y++W     ++  
Sbjct: 180 PLDIKNAKANIKHAGFLPAERAYIDRWLGEYEFVDVIRSLAGDIQGPYTWWSQRGRAFDN 239

Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           N G RID+   +PE         ID  P    + SDH P+ V+ D+
Sbjct: 240 NVGWRIDYQFATPELAETARGFVIDKAPSYDARWSDHAPLTVTYDV 285


>gi|171060718|ref|YP_001793067.1| exodeoxyribonuclease III Xth [Leptothrix cholodnii SP-6]
 gi|170778163|gb|ACB36302.1| exodeoxyribonuclease III Xth [Leptothrix cholodnii SP-6]
          Length = 262

 Score =  158 bits (400), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 60/267 (22%), Positives = 108/267 (40%), Gaps = 12/267 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFET--LQSLNYHIETC 60
           + + + N+N IR+ +   L  W++    D + +QE K +  +   +   L  +  H    
Sbjct: 1   MRLVSLNLNGIRSAVNKGLIPWVEAAEIDCMGVQELKAQHADLTADMTVLHGMQGHFHCA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GV + S+++P ++V  L   D D + R++EA +    + L I + Y P G+   
Sbjct: 61  EKKGYSGVGLYSRHEPSDVVIGLGHADFDAEGRYVEARYDTPQRKLSIISCYFPSGSSGD 120

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +           +    + L+     +  GD NI  Q  D  N      ++ F  E R
Sbjct: 121 ERQQA--KFRFLDLIEPHLRALKAGREFVLMGDVNIAHQEIDLKNWKGNLKNSGFLPEER 178

Query: 181 QSFQKL-QNMGFTDAIRATHDT--HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
               +L  + G  D  R          Y++W     + +KN G RID+ + +P   +   
Sbjct: 179 AWMTRLLGDTGLVDVYRRLRPDATDEAYTWWSNRGQARAKNVGWRIDYHLATPGLAATAR 238

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDIP 264
              I          SDH P+ +  D  
Sbjct: 239 ETSIYKA----QWFSDHAPLTIDYDFD 261


>gi|224282700|ref|ZP_03646022.1| exodeoxyribonuclease [Bifidobacterium bifidum NCIMB 41171]
 gi|313139858|ref|ZP_07802051.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
           41171]
 gi|313132368|gb|EFR49985.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
           41171]
          Length = 285

 Score =  158 bits (399), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 63/286 (22%), Positives = 97/286 (33%), Gaps = 26/286 (9%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI---- 57
           ++T+ T NVN IRA     +  W  E+ PDI C+QE +               +      
Sbjct: 1   MITITTSNVNGIRAAKRKGIETWAGEHAPDIWCMQEVRAPQDELDP-IFGEFGFEYATAG 59

Query: 58  ------------ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR--FIEATFTINT 103
                       E C  K   GV +L+          LPG D DV +         T   
Sbjct: 60  KIADQSELTAMNEVCRVKGRAGVGLLTDLPVTARRYGLPGLDEDVDSGRWIEADVTTPQG 119

Query: 104 QTLRIGNLYLPHGNPITS----TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159
             + +  +Y+  GN         KY    + + R      +        +  GD+NI   
Sbjct: 120 YGITVACVYVHAGNSDDPVKMAQKYRFLDTMLTRMGELRDEASRGGRQAVLCGDFNIAHT 179

Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSWSK 217
           P D  N       A F    R    +         +  +   D    Y++W     ++  
Sbjct: 180 PLDIKNAKANIKHAGFLPAERAYVDRWLGEYEFVDVIRSLAGDIQGPYTWWSQRGRAFDN 239

Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           N G RID+   +PE         ID  P    + SDH P+ ++ D+
Sbjct: 240 NVGWRIDYQFATPELAETARGFVIDKAPSYDARWSDHAPLTITYDV 285


>gi|118497430|ref|YP_898480.1| exodeoxyribonuclease III [Francisella tularensis subsp. novicida
           U112]
 gi|195536121|ref|ZP_03079128.1| exodeoxyribonuclease III [Francisella tularensis subsp. novicida
           FTE]
 gi|118423336|gb|ABK89726.1| exodeoxyribonuclease III [Francisella novicida U112]
 gi|194372598|gb|EDX27309.1| exodeoxyribonuclease III [Francisella tularensis subsp. novicida
           FTE]
          Length = 262

 Score =  158 bits (399), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 63/268 (23%), Positives = 115/268 (42%), Gaps = 17/268 (6%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIE 58
           ++ V T+N N IRA        W K  + D +C+QETK +      +         Y  +
Sbjct: 1   MIKVMTFNANGIRAAARKGFWEWFKTQDVDFLCIQETKAQFHQLEKDIEHFPTGYYYEFK 60

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
              +K Y+G AI +K +P++++  L  D  D + R+I+  +        I +LYLP G+ 
Sbjct: 61  DAVKKGYSGTAIYAKKKPLKVIKELGLDWADDEGRYIQFDYE----NFSIASLYLPSGS- 115

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF--T 176
               + + K+ +++++     +++E     I  GD+NI+ +  D  N             
Sbjct: 116 SGDVRQEYKMQFLEKYKEILKEQVESGRDFIVCGDFNIVHKEIDIKNWKSNYGKTSGVLP 175

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
            E         ++G+ D  R  +     Y++W     + + N G RID+ + +P     +
Sbjct: 176 EEQAWLDHIFDDLGWVDTFRVINHQPLQYTWWSNRGQARANNVGWRIDYHISTPAIKDKV 235

Query: 237 H--SARIDTKPRGWTKPSDHTPVIVSLD 262
              S  I  +       SDH P+ +S D
Sbjct: 236 VPESDYIYRE----NWFSDHAPLTISYD 259


>gi|239947787|ref|ZP_04699540.1| exodeoxyribonuclease III [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239922063|gb|EER22087.1| exodeoxyribonuclease III [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 279

 Score =  158 bits (399), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 78/268 (29%), Positives = 120/268 (44%), Gaps = 7/268 (2%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETC 60
           S++ + TWN+NS+  RI  L     E+ PDII LQETK  D  FP E ++++ Y H+   
Sbjct: 14  SLMKIVTWNINSLHLRIDLLRKLAHEHQPDIILLQETKVADSLFPLEVIKNIGYEHVIYA 73

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           GQKSYNGVAI+SK+      +    +        I     I+   +          +   
Sbjct: 74  GQKSYNGVAIISKFPLNNAFSLELYNSDKRHIAAIVNDIEIHNFYV---PAGGDVPDIEV 130

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
           +TK+  K+ +++    + +      + +I  GD NI P  HD ++     N    T   R
Sbjct: 131 NTKFKHKLEYVRLMQEWLTTNRTKNDKIIIVGDLNIAPHEHDVWSSKQLRNVISHTDIER 190

Query: 181 QSFQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLLH 237
               +LQN       +          Y++W Y    W K N+G R+DHI +S      L 
Sbjct: 191 SLLVELQNSLGFIDSSRHFVPFDEKFYTWWSYRNIDWKKSNRGRRLDHIWVSDNLKDALF 250

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           S  +  + R W  PSDH P  V+ +  +
Sbjct: 251 SMHLLPEARDWPPPSDHVPYFVNFNFDD 278


>gi|254372791|ref|ZP_04988280.1| exodeoxyribonuclease III [Francisella tularensis subsp. novicida
           GA99-3549]
 gi|151570518|gb|EDN36172.1| exodeoxyribonuclease III [Francisella novicida GA99-3549]
          Length = 262

 Score =  158 bits (399), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 63/268 (23%), Positives = 114/268 (42%), Gaps = 17/268 (6%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIE 58
           ++ V T+N N IRA        W K  + D +C+QETK +      +         Y  +
Sbjct: 1   MIKVMTFNANGIRAAARKGFWEWFKTQDVDFLCMQETKAQFHQLEKDIEHFPTGYYYEFK 60

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
              +K Y+G AI +K +P++++  L  D  D + R+I+  +        I +LYLP G+ 
Sbjct: 61  DAVKKGYSGTAIYAKKKPLKVIKELGLDWADDEGRYIQFDYE----NFSIASLYLPSGS- 115

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF--T 176
               + + K+ +++++     ++ E     I  GD+NI+ +  D  N             
Sbjct: 116 SGDVRQEYKMQFLEKYKEILKEQAESGRDFIVCGDFNIVHKEIDIKNWKSNYGKTSGVLP 175

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
            E         ++G+ D  R  +     Y++W     + + N G RID+ + +P     +
Sbjct: 176 EEQAWLDHIFDDLGWVDTFRVINHQPLQYTWWSNRGQARANNVGWRIDYHISTPAIKDKV 235

Query: 237 H--SARIDTKPRGWTKPSDHTPVIVSLD 262
              S  I  +       SDH P+ +S D
Sbjct: 236 VPESDYIYRE----NWFSDHAPLTISYD 259


>gi|238854034|ref|ZP_04644388.1| exodeoxyribonuclease III [Lactobacillus gasseri 202-4]
 gi|238833354|gb|EEQ25637.1| exodeoxyribonuclease III [Lactobacillus gasseri 202-4]
          Length = 254

 Score =  158 bits (399), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 65/261 (24%), Positives = 107/261 (40%), Gaps = 12/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA + H       + + DI  +Q+T+ E      + L     +     +
Sbjct: 1   MKFMSWNVNGLRAALRHGFVNTFTDLDADIFAIQDTRVEANEVQID-LPGYYQYWNYAKR 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y G A+ +K +PI +       ++D + R I   F        I       G  +   
Sbjct: 60  KGYAGTAVFTKEKPITVANGFGVPEVDGEGRSITLEFPNFYF---IDVQVPFSGEKLQRL 116

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
            + +  +   R        L   +P+I  GD ++  +  D   P      A FT   R+ 
Sbjct: 117 DFRELWAQTFRNYVTK---LMQYKPVIIGGDMSVAHEKIDLAEPDDNHRHAGFTGIERKE 173

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F +L N GF D  R  H     Y++W Y  D+ +KN G R+D+ + S      + + +I 
Sbjct: 174 FSELLNAGFIDTFRYFHPDEAKYTYWSYREDARAKNIGWRLDYFLASHNLEDKMINTKIL 233

Query: 243 TKPRGWTKPSDHTPVIVSLDI 263
               G    SDH P+ + LDI
Sbjct: 234 NNIMG----SDHCPIELDLDI 250


>gi|50086482|ref|YP_047992.1| catabolite repression control protein [Acinetobacter sp. ADP1]
 gi|49532458|emb|CAG70170.1| catabolite repression control protein [Acinetobacter sp. ADP1]
          Length = 285

 Score =  158 bits (399), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 61/266 (22%), Positives = 107/266 (40%), Gaps = 7/266 (2%)

Query: 2   SVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIET 59
            ++ V + NVN +R+ +   L  W++++  D+IC+QE++     +  +      Y H+  
Sbjct: 24  KILRVVSINVNGLRSSVTKGLLEWLEKSEADVICMQESRITHAQWTDKFKPEGWYTHLFP 83

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +  Y G AI S+     +   L  +  D Q RFI A F +                  
Sbjct: 84  AERAGYAGTAIYSRIPFKSVQDGLGFELADSQGRFIAAEFDLGLNQPAYICSLYLPSGSS 143

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-E 178
                  K  +++++ +   Q  +  + +I  GDYNI+ +  D  N    +  +     E
Sbjct: 144 GDEAQARKDVFLEKYAQILKQWRDENKSIIVCGDYNIVHKRIDIKNWSGNQKSSGCLPHE 203

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
                     +G+ D  R       LYS+W     + +KN G RID+   SP+  +   +
Sbjct: 204 RAWLDHIYDELGYVDTFREVRPEAELYSWWSNRGQARAKNVGWRIDYHACSPDWKTRTVN 263

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIP 264
           A +          SDH PVI+   I 
Sbjct: 264 AWVYRD----EWYSDHAPVIIDYKIS 285


>gi|296135801|ref|YP_003643043.1| exodeoxyribonuclease III Xth [Thiomonas intermedia K12]
 gi|295795923|gb|ADG30713.1| exodeoxyribonuclease III Xth [Thiomonas intermedia K12]
          Length = 267

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 60/267 (22%), Positives = 106/267 (39%), Gaps = 15/267 (5%)

Query: 4   VTVATWNVNSIR-ARIHNLAAWIKEN-NPDIICLQETKTEDKNFPFETLQSLNYH---IE 58
           + V T N+N IR A    +  W++    PD++C+QE K  + +           H    +
Sbjct: 6   LRVTTLNLNGIRSAANKGVDDWLRSQARPDVLCVQELKALEADMTPGLRTLGGLHGAAFQ 65

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ-TLRIGNLYLPHGN 117
              +  Y+GV +  K++P ++       + D + R++EA +       L I + Y P G+
Sbjct: 66  HAEKPGYSGVGLYWKHEPDDVRIGFGHAEFDAEGRYVEAIYKRPGGGRLSIVSAYFPSGS 125

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
                +                  L+    ++  GD NI  +  D  N      ++ F  
Sbjct: 126 SSEERQQA--KFRFLADFYEHLLALKAAGEVLLCGDVNIAHKEIDLKNWKGNLKNSGFLP 183

Query: 178 EVRQSFQKLQNMG-FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
           E R    +L +   + D  R        Y++W     + +KN G RID+ + +P   +  
Sbjct: 184 EERAWMTRLIDEAGYVDVFRQLDPAPDRYTWWSNRGQARAKNVGWRIDYHLATPGIAAQA 243

Query: 237 H--SARIDTKPRGWTKPSDHTPVIVSL 261
              SA I T+ R     SDH P+ +  
Sbjct: 244 KSDSAWIYTEQR----FSDHAPLTIDY 266


>gi|226529129|ref|NP_001146906.1| LOC100280514 [Zea mays]
 gi|195604980|gb|ACG24320.1| apurinic endonuclease-redox protein [Zea mays]
          Length = 510

 Score =  158 bits (398), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 65/272 (23%), Positives = 115/272 (42%), Gaps = 23/272 (8%)

Query: 4   VTVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTEDKNFPFETLQS---LNYH 56
           + + +WNVN ++A + +    +    +  + D++CLQETK ++K+   E ++      Y 
Sbjct: 250 LKIMSWNVNGLKALLKSRGFSVQQLAQREDFDVLCLQETKMQEKDI--EVIKDTLLDGYT 307

Query: 57  IETCGQK----SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
                       Y+G AI+S+ +P+ I   L   D D + R +   F        +   Y
Sbjct: 308 NSFWTCSVSKLGYSGTAIISRVKPLSIKYGLGIPDHDTEGRVVTVEFD----DFYLLTAY 363

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
           +P+       +   +++     L    + LE  +P+I  GD N   Q  D ++P      
Sbjct: 364 VPNSG-DGLKRLTYRVTEWDPSLGNYMKELEKSKPVILTGDLNCAHQEIDIHDPAGNRRS 422

Query: 173 ACF-TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
           A F   E         + GF D  R  H     YS+W Y  ++   NKG R+D+ ++S  
Sbjct: 423 AGFTNEERESFGTNFLSKGFVDTFRKQHPNVVAYSYWGYRHNARKTNKGWRLDYFLVSES 482

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
               +H + I          SDH+P+ + L +
Sbjct: 483 IAEKVHDSYILPDI----SASDHSPLGLVLKL 510


>gi|195604738|gb|ACG24199.1| apurinic endonuclease-redox protein [Zea mays]
          Length = 505

 Score =  158 bits (398), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 65/272 (23%), Positives = 115/272 (42%), Gaps = 23/272 (8%)

Query: 4   VTVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTEDKNFPFETLQS---LNYH 56
           + + +WNVN ++A + +    +    +  + D++CLQETK ++K+   E ++      Y 
Sbjct: 245 LKIMSWNVNGLKALLKSRGFSVQQLAQREDFDVLCLQETKMQEKDI--EVIKDTLLDGYT 302

Query: 57  IETCGQK----SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
                       Y+G AI+S+ +P+ I   L   D D + R +   F        +   Y
Sbjct: 303 NSFWTCSVSKLGYSGTAIISRVKPLSIKYGLGIPDHDTEGRVVTVEFD----DFYLLTAY 358

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
           +P+       +   +++     L    + LE  +P+I  GD N   Q  D ++P      
Sbjct: 359 VPNSG-DGLKRLTYRVTEWDPSLGNYMKELEKSKPVILTGDLNCAHQEIDIHDPAGNRRS 417

Query: 173 ACF-TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
           A F   E         + GF D  R  H     YS+W Y  ++   NKG R+D+ ++S  
Sbjct: 418 AGFTNEERESFGTNFLSKGFVDTFRKQHPNVVAYSYWGYRHNARKTNKGWRLDYFLVSES 477

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
               +H + I          SDH+P+ + L +
Sbjct: 478 IAEKVHDSYILPDI----SASDHSPLGLVLKL 505


>gi|224137778|ref|XP_002322649.1| predicted protein [Populus trichocarpa]
 gi|222867279|gb|EEF04410.1| predicted protein [Populus trichocarpa]
          Length = 428

 Score =  158 bits (398), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 75/273 (27%), Positives = 117/273 (42%), Gaps = 20/273 (7%)

Query: 2   SVVTVATWNVNSIRARIH--NL--AAWIKENNPDIICLQETKTEDKNFPFETLQSL--NY 55
           + V + +WNVN +RA +           +  N D++CLQETK +         Q L   Y
Sbjct: 165 NSVKLMSWNVNGLRALLKFEGFSALELAQRENFDVLCLQETKLQASKDVDSIKQCLIDGY 224

Query: 56  HIETCGQKS----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
                   +    Y+G AI+S+ +P+ +   L   D D + R + A F     +  + N 
Sbjct: 225 ENSFWTCSNAKLGYSGTAIVSRIKPLSVCYGLGIPDHDSEGRVVTAEFD----SFYLVNT 280

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
           Y+P+       +   +I+     L    + LE  +P+I  GD N   Q  D +NP   + 
Sbjct: 281 YVPNSG-DGLKRLSYRITQWDPSLSNYMKELEKSKPVILTGDLNCAHQEIDIFNPAGNKR 339

Query: 172 DACFTLEVRQSFQKLQ-NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230
            A FT E RQSF     + G  D  R  H     Y++W Y       NKG R+D+ ++S 
Sbjct: 340 SAGFTEEERQSFGSNFLSKGLVDTFRKQHPNVVGYTYWGYRHGGRKTNKGWRLDYFLVSE 399

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                +H + I     G    SDH P+ + L +
Sbjct: 400 SIADKVHDSYIVPDVNG----SDHCPIGLVLKV 428


>gi|208779224|ref|ZP_03246570.1| exodeoxyribonuclease III [Francisella novicida FTG]
 gi|208745024|gb|EDZ91322.1| exodeoxyribonuclease III [Francisella novicida FTG]
          Length = 262

 Score =  158 bits (398), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 63/268 (23%), Positives = 115/268 (42%), Gaps = 17/268 (6%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIE 58
           ++ V T+N N IRA        W K  + D +C+QETK +      +         Y  +
Sbjct: 1   MIKVMTFNANGIRAAARKGFWEWFKTQDVDFLCMQETKAQFHQLEKDIEHFPTGYYYEFK 60

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
              +K Y+G AI +K +P++++  L  D  D + R+I+  +        I +LYLP G+ 
Sbjct: 61  DAVKKGYSGTAIYAKKKPLKVIKELGLDWADDEGRYIQFDYE----NFSIASLYLPSGS- 115

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF--T 176
               + + K+ +++++     +++E     I  GD+NI+ +  D  N             
Sbjct: 116 SGDVRQEYKMKFLEKYKEILKEQVESGRDFIVCGDFNIVHKEIDIKNWKSNYGKTSGVLP 175

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
            E         ++G+ D  R  +     Y++W     + + N G RID+ + +P     +
Sbjct: 176 EEQAWLDHIFDDLGWVDTFRVINHQPLQYTWWSNRGQARANNVGWRIDYHISTPAIKDKV 235

Query: 237 H--SARIDTKPRGWTKPSDHTPVIVSLD 262
              S  I  +       SDH P+ +S D
Sbjct: 236 VPESDYIYRE----NWFSDHAPLTISYD 259


>gi|88601744|ref|YP_501922.1| exodeoxyribonuclease III (xth) [Methanospirillum hungatei JF-1]
 gi|88187206|gb|ABD40203.1| exodeoxyribonuclease III (xth) [Methanospirillum hungatei JF-1]
          Length = 264

 Score =  158 bits (398), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 75/273 (27%), Positives = 120/273 (43%), Gaps = 18/273 (6%)

Query: 1   MSVVTVATWNVNSIRA-----RIHNLA--AWIKENNPDIICLQETKTEDKNFPFET--LQ 51
           M   T+ +WNVN +RA      +  +         N DI+C+QETK +  +   +   + 
Sbjct: 1   MKTYTLYSWNVNGLRAISSKEVLPGVLFPGLPAHENIDILCIQETKADAHSLKPDITRIP 60

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
              ++I    +K Y+GVA+ S+ +P  I       + D + R I A F        + N+
Sbjct: 61  DYFFYINPAERKGYSGVAMYSRTEPESIELGGLSPEFDSEGRIITARFP----EFVLMNV 116

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
           Y P+G          K+ +   FL          E +IF GD N   +P D   P   E 
Sbjct: 117 YFPNGGASDER-LAFKLRFYDAFLEKIKTMDAAGERIIFCGDVNTAHKPIDLARPKENEL 175

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
            + F    R+   ++   GF D+ R   D  + YS+WDY + + ++N G RID+  ++  
Sbjct: 176 VSGFLPIEREWIDRVIAAGFYDSFRLFSDEGNQYSWWDYKSRARTRNVGWRIDYFFVNTA 235

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
           A   +  A I     G    SDH PV ++L+ P
Sbjct: 236 AKPFITGAGIRNDIMG----SDHCPVTLTLEFP 264


>gi|46581661|ref|YP_012469.1| exodeoxyribonuclease III [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|46451084|gb|AAS97729.1| exodeoxyribonuclease III [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|311235301|gb|ADP88155.1| exodeoxyribonuclease III [Desulfovibrio vulgaris RCH1]
          Length = 257

 Score =  158 bits (398), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 67/264 (25%), Positives = 107/264 (40%), Gaps = 15/264 (5%)

Query: 5   TVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET---C 60
            + +WNVN  RA        W      D++ LQETK +      E      +H       
Sbjct: 4   RLVSWNVNGFRAVSSKPEWNWFSTTTADVVALQETKADPAQVGEEHRSPDGWHAWWLPAT 63

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GVA+ S++ P+++   LP +    + R +  TF          N+Y P+G    
Sbjct: 64  VKKGYSGVAVFSRHTPLDVAYDLPDERFRGEGRCLHLTFP----EFHFFNIYFPNGGMGE 119

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
                             ++ L  + P++  GD+N   +P D   P   E  + F  E R
Sbjct: 120 ERL--RYKMGYYEAFLEHAETLRRDRPIVVCGDFNTAHRPIDLARPKENETVSGFLPEER 177

Query: 181 QSFQKLQNMGFTDAIRA-THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
               +    G+ D  R    D    YS+W Y   + ++N G RID+  +S E    +  A
Sbjct: 178 AWMDRFVAAGYVDTFRHVRGDEADRYSWWSYKTRARARNVGWRIDYFFVSEELRGAVRDA 237

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
            I+    G    SDH PV + L++
Sbjct: 238 WIEMDVMG----SDHCPVGLELEV 257


>gi|152967922|ref|YP_001363706.1| exodeoxyribonuclease III Xth [Kineococcus radiotolerans SRS30216]
 gi|151362439|gb|ABS05442.1| exodeoxyribonuclease III Xth [Kineococcus radiotolerans SRS30216]
          Length = 273

 Score =  158 bits (398), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 54/263 (20%), Positives = 94/263 (35%), Gaps = 7/263 (2%)

Query: 6   VATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64
           VAT NVN +RA +   + +W+   +PD++ LQE +  D           +        K 
Sbjct: 9   VATVNVNGVRAAVRRGMHSWLDARDPDVLLLQEVRAPDAELRKALPSYPHVAHTEAAAKG 68

Query: 65  YNGVAILSKYQPIEIVTHL-PGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
             GVA+ ++ +   +          +   R+IE         + + + Y+  G   T  +
Sbjct: 69  RAGVAVATRSEFTAVRIGFAHDPHFETSGRWIEVDVDTAIGPMTLVSTYVHSGEVGTPQQ 128

Query: 124 YDDKIS---WIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
            D          RF    +   E     + AGD N+     D  N       A F  + R
Sbjct: 129 EDKHRFLDAMDVRFAELGAIAAETGREALVAGDLNVGHTERDIKNWKGNRGKAGFLEDER 188

Query: 181 QSFQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
             F                  D    Y++W +   ++  + G RID+ +++P   + L  
Sbjct: 189 AHFDHWFGDLGWVDTQREVAGDVDGPYAWWSWRGQAFDNDTGWRIDYQLVTPGLGARLQG 248

Query: 239 ARIDTKPRGWTKPSDHTPVIVSL 261
              D       + SDH PV+ + 
Sbjct: 249 VETDRAASYAERFSDHAPVVATY 271


>gi|91205073|ref|YP_537428.1| exodeoxyribonuclease III [Rickettsia bellii RML369-C]
 gi|157827591|ref|YP_001496655.1| exodeoxyribonuclease III [Rickettsia bellii OSU 85-389]
 gi|91068617|gb|ABE04339.1| Exodeoxyribonuclease III [Rickettsia bellii RML369-C]
 gi|157802895|gb|ABV79618.1| Exodeoxyribonuclease III [Rickettsia bellii OSU 85-389]
          Length = 273

 Score =  158 bits (398), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 79/276 (28%), Positives = 126/276 (45%), Gaps = 7/276 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62
           + + TWN+NS+R RI  L     E+ PDII LQETK +D  FP E ++++ Y H+   GQ
Sbjct: 1   MKIVTWNINSLRLRIDLLKRLAYEHQPDIILLQETKVDDPLFPLEVIKNIGYEHVIYSGQ 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           KSYNGVAI+SK     + +    +              I+   +          +   ++
Sbjct: 61  KSYNGVAIISKLPLQNVSSLELYNGDKRHIAATVNNIEIHNFYV---PAGGDIPDIELNS 117

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF-TLEVRQ 181
           K+  K+ +I+    + +     ++ +I AGD NI P PHD ++     N      +E   
Sbjct: 118 KFKHKLEYIRLMQEWLTNNRTRDDKIIIAGDLNIAPHPHDVWSSKQLRNVISHTDIERSL 177

Query: 182 SFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLLHSA 239
             +   ++ F D+ R         Y++W Y    W K N+G R+DHI +S      L S 
Sbjct: 178 LVELQNSLEFIDSSRHFVPLDEKFYTWWSYRNVDWKKSNRGRRLDHIWVSNNLKDELFSI 237

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTS 275
            + ++ R W  PSDH P  V+L        +    +
Sbjct: 238 HLLSEARDWMPPSDHVPYFVTLRCHPVACPRDPKNN 273


>gi|307297053|ref|ZP_07576869.1| exodeoxyribonuclease III Xth [Sphingobium chlorophenolicum L-1]
 gi|306877579|gb|EFN08807.1| exodeoxyribonuclease III Xth [Sphingobium chlorophenolicum L-1]
          Length = 265

 Score =  158 bits (398), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 76/268 (28%), Positives = 120/268 (44%), Gaps = 12/268 (4%)

Query: 1   MS-VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIE 58
           MS  +++A+WN+NS+RAR+  +  ++ E  PDI+CLQETK  ++ FP    + L Y H  
Sbjct: 1   MSQTLSIASWNINSVRARLDIVERFLTEEAPDILCLQETKVVNEIFPTAMFRQLGYVHQV 60

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
             GQ+ ++GVAI+S+     +  H                       +RI N+Y+P G  
Sbjct: 61  LNGQRMHHGVAIMSR-----VPIHEDDRLDWQANGEARHVGVRLDNGVRIENVYVPAGGD 115

Query: 119 ITSTKYDDKISWIKRFLRFASQRLE--LEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
           I   + + K      FL    Q      ++P I  GD+NI P   D ++     N    T
Sbjct: 116 IADREVNPKFGQKLDFLERMIQWSSGLEDKPTILTGDFNIAPMECDVWSHKQLLNVVSHT 175

Query: 177 LEVRQ--SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEAT 233
               +  +  +  N               LY++W Y A  W   ++G R+DH+ ++ +  
Sbjct: 176 PIECEILARLQASNDWVDIGRHFYPAPQRLYTWWSYRAKDWAESDRGRRLDHMWMTRDVA 235

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSL 261
               S R+    R W KPSDH P+I   
Sbjct: 236 GKAISHRVVEPARNWGKPSDHIPIITEF 263


>gi|198420194|ref|XP_002123983.1| PREDICTED: similar to APEX nuclease (multifunctional DNA repair
           enzyme) 1 [Ciona intestinalis]
          Length = 337

 Score =  158 bits (398), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 74/266 (27%), Positives = 127/266 (47%), Gaps = 15/266 (5%)

Query: 4   VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + +++WNV  +RA +      W+K  +PDI  LQETK  +K+ P E      YH+     
Sbjct: 82  LKISSWNVAGVRAWVKKDGVKWVKGESPDIFTLQETKCSEKDIPQELKDLKEYHMSWNVA 141

Query: 62  --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
              K ++GV + SK +P+E+   +  ++ D + R    T T       + + Y+P+    
Sbjct: 142 KSTKGFSGVGLFSKVKPLEVKFGIGVEEHDQEGR----TITAEYDKFYLVSTYVPNAQ-R 196

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              + + ++ W   FL +    L+ ++P++  GD N+     D  NP   + +A F+ E 
Sbjct: 197 GLKRLEYRLKWNSDFLAYIKS-LDEKKPVVLCGDMNVSHHEIDLANPKGNKKNAGFSQEE 255

Query: 180 RQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           R    +L   GFTD  R  +      Y+FW Y  +  +KN G R+D+ +LS +    +  
Sbjct: 256 RDGMTELLQSGFTDTYRDLYPDLTGQYTFWTYMGNCRAKNVGWRLDYFILSNKWKDNVCD 315

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIP 264
             I+T   G    SDH P+ + L +P
Sbjct: 316 NIIETSAMG----SDHCPITLLLAVP 337


>gi|297824099|ref|XP_002879932.1| apurinic endonuclease-redox protein [Arabidopsis lyrata subsp.
           lyrata]
 gi|297325771|gb|EFH56191.1| apurinic endonuclease-redox protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 550

 Score =  158 bits (398), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 73/272 (26%), Positives = 116/272 (42%), Gaps = 21/272 (7%)

Query: 4   VTVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTEDKNFPFETLQS---LNYH 56
           V V TWNVN +RA +           +  N DI+CLQETK + K+   E +++     Y 
Sbjct: 288 VKVMTWNVNGLRALLKLESFSALQLAQRENFDILCLQETKLQVKDV--EEIKNTLIDGYD 345

Query: 57  IETCGQK----SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
                       Y+G AI+S+ +P+ +         D        T   ++  L I    
Sbjct: 346 HSFWSCSVSKLGYSGTAIISRIKPLSVRYGTGLSGSDHDMEGRIVTAEFDSFYL-INTYV 404

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
              G+     +   +I    R L    + LE  +P++  GD N   +  D +NP   + +
Sbjct: 405 PNSGD--GLKRLSYRIEEWDRTLSNHIKELEKSKPVVLTGDLNCAHEEIDIFNPAGNKRN 462

Query: 173 ACFTLEVRQSFQKLQ-NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
           A FT+E RQSF     + GF D  R  H     Y++W Y       N+G R+D+ ++S  
Sbjct: 463 AGFTIEERQSFGANFLDKGFVDTFRKQHPGVVGYTYWGYRHGGRKTNRGWRLDYFLVSES 522

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             + +H + I     G    SDH P+ + L +
Sbjct: 523 IAANVHDSYILPDING----SDHCPIGLILKL 550


>gi|120601181|ref|YP_965581.1| exodeoxyribonuclease III [Desulfovibrio vulgaris DP4]
 gi|120561410|gb|ABM27154.1| exodeoxyribonuclease III [Desulfovibrio vulgaris DP4]
          Length = 257

 Score =  157 bits (397), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 67/264 (25%), Positives = 107/264 (40%), Gaps = 15/264 (5%)

Query: 5   TVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET---C 60
            + +WNVN  RA        W      D++ LQETK +      E      +H       
Sbjct: 4   RLVSWNVNGFRAVSSKPEWNWFSTTTADVVALQETKADPAQVGEEHRSPDGWHAWWLPAT 63

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GVA+ S++ P+++   LP +    + R +  TF          N+Y P+G    
Sbjct: 64  VKKGYSGVAVFSRHTPLDVAYDLPDERFRGEGRCLHLTFP----EFHFFNIYFPNGGMGE 119

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
                             ++ L  + P++  GD+N   +P D   P   E  + F  E R
Sbjct: 120 ERL--RYKMGYYEAFLEHAETLRRDRPIVVCGDFNTAHRPIDLARPKENETVSGFLPEER 177

Query: 181 QSFQKLQNMGFTDAIRA-THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
               +    G+ D  R    D    YS+W Y   + ++N G RID+  +S E    +  A
Sbjct: 178 AWMDRFVATGYVDTFRHVRGDEADRYSWWSYKTRARARNVGWRIDYFFVSEELRGAVRDA 237

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
            I+    G    SDH PV + L++
Sbjct: 238 WIEMDVMG----SDHCPVGLELEV 257


>gi|51473457|ref|YP_067214.1| exonuclease III [Rickettsia typhi str. Wilmington]
 gi|51459769|gb|AAU03732.1| E.coli exonuclease III [Rickettsia typhi str. Wilmington]
          Length = 261

 Score =  157 bits (397), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 76/262 (29%), Positives = 116/262 (44%), Gaps = 7/262 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62
           + + TWN+NS+R RI  L     E  PDII LQETK  +  FP E ++++ Y H+   GQ
Sbjct: 1   MKIVTWNINSLRLRIELLRKLAYEYQPDIILLQETKVANSLFPLEVIKNIGYEHVIYSGQ 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           KSYNGVAI+SK     + +       D +         +      +        +   + 
Sbjct: 61  KSYNGVAIISKLPLNNVFS--LELYNDDKRHIAAIVHGLEIHNFYVPAG-GDIPDIEVNL 117

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           K+  K+ +++    + +      + +I  GD NI P  HD ++     N    T   R  
Sbjct: 118 KFKHKLEYVRLMKEWFTTNRTKNDKIIIVGDLNIAPHEHDVWSSKQMRNVISHTDIERSL 177

Query: 183 FQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLLHSA 239
             +LQN                  Y++W Y    W K N+G R+DHI +S      L S 
Sbjct: 178 LVELQNSLGFIDSNRYFISLDKKCYTWWSYRNVDWKKSNRGRRLDHIWVSDNLKDALFSM 237

Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261
            + ++ R W +PSDH P  V+L
Sbjct: 238 NVLSEARDWLRPSDHVPYFVTL 259


>gi|328676925|gb|AEB27795.1| Exodeoxyribonuclease III [Francisella cf. novicida Fx1]
          Length = 262

 Score =  157 bits (397), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 65/268 (24%), Positives = 115/268 (42%), Gaps = 17/268 (6%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIE 58
           ++ V T+N N IRA        W K  + D +C+QETK +      +         Y  +
Sbjct: 1   MIKVMTFNANGIRAAARKGFWEWFKTQDVDFLCIQETKAQFHQLEKDEQHFPDGYYYDFK 60

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
              +K Y+G AI +K +P++I+  L  D  D + R+I+  +        I +LYLP G+ 
Sbjct: 61  DAVKKGYSGTAIYAKKKPLKIIKELGLDWADDEGRYIQFDYE----NFSIASLYLPSGS- 115

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF--T 176
               + + K+ +++++     +++E     I  GD+NI+ +  D  N             
Sbjct: 116 SGDMRQEYKMQFLEKYKGILKEQVESGRDFIVCGDFNIVHKEIDIKNWKSNYGKTSGVLP 175

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
            E         N+G+ D  R  +     Y++W     + + N G RID+ + +P     +
Sbjct: 176 EEQAWLDHIFDNLGWVDTFRVINHQPLQYTWWSNRGQARANNVGWRIDYHISTPAIKDKV 235

Query: 237 H--SARIDTKPRGWTKPSDHTPVIVSLD 262
              S  I  +       SDH P+ +S D
Sbjct: 236 VPESDYIYRE----NWFSDHAPLTISYD 259


>gi|227829121|ref|YP_002830900.1| exodeoxyribonuclease III Xth [Sulfolobus islandicus L.S.2.15]
 gi|229577921|ref|YP_002836319.1| exodeoxyribonuclease III Xth [Sulfolobus islandicus Y.G.57.14]
 gi|238618580|ref|YP_002913405.1| exodeoxyribonuclease III Xth [Sulfolobus islandicus M.16.4]
 gi|284996506|ref|YP_003418273.1| exodeoxyribonuclease III Xth [Sulfolobus islandicus L.D.8.5]
 gi|227455568|gb|ACP34255.1| exodeoxyribonuclease III Xth [Sulfolobus islandicus L.S.2.15]
 gi|228008635|gb|ACP44397.1| exodeoxyribonuclease III Xth [Sulfolobus islandicus Y.G.57.14]
 gi|238379649|gb|ACR40737.1| exodeoxyribonuclease III Xth [Sulfolobus islandicus M.16.4]
 gi|284444401|gb|ADB85903.1| exodeoxyribonuclease III Xth [Sulfolobus islandicus L.D.8.5]
          Length = 247

 Score =  157 bits (397), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 68/261 (26%), Positives = 111/261 (42%), Gaps = 18/261 (6%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + +WNVN IRA +  NL  +I+ N  ++I  QETK    +        + Y + +   
Sbjct: 1   MKIVSWNVNGIRAALKKNLIDFIENNMFEVIMFQETK---GDIVPLDFIMMGYEVISFPA 57

Query: 62  -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GV  L+K +PI ++  L   + D + R +            I   +   G+ + 
Sbjct: 58  KRKGYSGVMTLTKIKPINVIKGLQIKEFDDEGRTVTLELK---DFYVINAYFPRAGDNLE 114

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
              +  K +            L   +P+I  GD+NI  Q  D             T + R
Sbjct: 115 RLDFKLKFNNEIENFVLK---LRKAKPVILCGDFNIAHQNIDGAFSDP--TIPGLTPQER 169

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
             F    ++GF D  R  H     YS+W Y   +  KN G+R+D+ ++S E    +  A 
Sbjct: 170 SWFSHFLSLGFIDTFRYLHPNVRKYSWWSYMGKAREKNLGLRLDYCIVSEELKDRIKMAD 229

Query: 241 IDTKPRGWTKPSDHTPVIVSL 261
           I    +G    SDH P+I+ L
Sbjct: 230 ILIDIQG----SDHAPIILEL 246


>gi|300723413|ref|YP_003712716.1| exonuclease III [Xenorhabdus nematophila ATCC 19061]
 gi|297629933|emb|CBJ90553.1| exonuclease III [Xenorhabdus nematophila ATCC 19061]
          Length = 277

 Score =  157 bits (397), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 73/256 (28%), Positives = 120/256 (46%), Gaps = 8/256 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H LAA ++++ PD+I LQE K  D+ FP E +  L YH+   GQK
Sbjct: 1   MKFVSFNINGLRARPHQLAAIVEQHRPDVIGLQEIKVHDEMFPLEEINKLGYHVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST- 122
           S+ GVA+L++ +P+++    P D  D Q R I A        L + N Y P G       
Sbjct: 61  SHYGVALLTRQKPVDVRKGFPTDGDDAQRRIIMADLETPLGLLTVINGYFPQGESRDHPV 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE------NDACFT 176
           K+  K  + +    +       E  ++  GD NI P   D       +          F 
Sbjct: 121 KFPAKEKFYQDLQSYLGNNHSPESNILIMGDMNISPTDSDIGIGENNQKRWLKTGKCSFL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+  ++L+N GF D  R  +   +  +S++DY +  +  N+G+RID ++ S     +
Sbjct: 181 PEEREWMERLKNWGFIDTFRFQYPEANDQFSWFDYRSKGFDDNRGLRIDLLLASHWLKGV 240

Query: 236 LHSARIDTKPRGWTKP 251
                I +      +P
Sbjct: 241 SLQVSIMSSAAWKNRP 256


>gi|88856446|ref|ZP_01131104.1| exodeoxyribonuclease III [marine actinobacterium PHSC20C1]
 gi|88814313|gb|EAR24177.1| exodeoxyribonuclease III [marine actinobacterium PHSC20C1]
          Length = 286

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 62/287 (21%), Positives = 114/287 (39%), Gaps = 25/287 (8%)

Query: 1   MSV-VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           M+  + +A+ NVN +RA     +  W+   + DI+ LQE +  D +         N   +
Sbjct: 1   MATRLRIASVNVNGVRAAYRKGMGDWLDARDIDILALQEVRAADADIEGLLGDGWNILHD 60

Query: 59  TCGQKSYNGVAILSKY-----QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
               K   GVA+ S+       P+     L  DD D   R+++A F ++ +T+ + + Y+
Sbjct: 61  AATAKGRAGVALASRKGSAASAPVAHRVALGADDFDSAGRWLKADFDVDGKTVTVVSTYV 120

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
             G  + + K  +K  +++  L    +     +  +  GD N+  +  D  N       A
Sbjct: 121 HSG-VVDTPKQVEKYKFLEAMLVRLPELAAHSDHALIVGDLNVGHRELDIKNWRGNRKKA 179

Query: 174 CFTLEVRQSFQKLQN-----------------MGFTDAIRATHDTHHLYSFWDYYADSWS 216
            F LE R  F ++                          +   +    Y++W     ++ 
Sbjct: 180 GFLLEERAYFDRIFGANGETVECVDGTTGPGLGWVDVGRQFAGEIDGPYTWWSQRGQAFD 239

Query: 217 KNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            + G RID+ + +P   + +   RID       + SDH PV+V   I
Sbjct: 240 TDTGWRIDYHVATPALAASVADYRIDKAGAWDERWSDHAPVVVDYSI 286


>gi|323476236|gb|ADX81474.1| exodeoxyribonuclease III Xth [Sulfolobus islandicus HVE10/4]
          Length = 247

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 68/261 (26%), Positives = 111/261 (42%), Gaps = 18/261 (6%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + +WNVN IRA +  NL  +I+ N  ++I  QETK    +        + Y + +   
Sbjct: 1   MKIVSWNVNGIRAALKKNLIDFIENNMFEVIMFQETK---GDIVPLDFIMMGYEVISFPA 57

Query: 62  -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GV  L+K +PI ++  L   + D + R +            I   +   G+ + 
Sbjct: 58  KRKGYSGVMTLTKLKPINVIKGLQIKEFDDEGRTVTLELK---DFYVINAYFPRAGDNLE 114

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
              +  K +            L   +P+I  GD+NI  Q  D             T + R
Sbjct: 115 RLDFKLKFNNEIENFVLK---LRKAKPVILCGDFNIAHQNIDGAFSDP--TIPGLTPQER 169

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
             F    ++GF D  R  H     YS+W Y   +  KN G+R+D+ ++S E    +  A 
Sbjct: 170 SWFSHFLSLGFIDTFRYLHPNVRKYSWWSYMGKAREKNLGLRLDYCIVSEELKDRIKMAD 229

Query: 241 IDTKPRGWTKPSDHTPVIVSL 261
           I    +G    SDH P+I+ L
Sbjct: 230 ILIDIQG----SDHAPIILEL 246


>gi|148272146|ref|YP_001221707.1| putative exonuclease III [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|147830076|emb|CAN01005.1| putative exonuclease III [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
          Length = 281

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 57/280 (20%), Positives = 106/280 (37%), Gaps = 19/280 (6%)

Query: 2   SVVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           S + VA+ N N IRA     +  W+   + DI+ +QE + E  +         N   +  
Sbjct: 3   SNLRVASINTNGIRAAFRKGMGDWLATRDVDILAIQEVRAETSDIEGLLGPEWNVLHDAA 62

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
             K   GVAI S+ +       +  +D D   R++EA + ++   + + + Y+  G  + 
Sbjct: 63  TAKGRAGVAIASRRRAEIHRVAIGEEDFDSAGRWLEADYDVDGTIVTVVSAYVHSGE-VG 121

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
           + K D+K  ++    R   +     E  +  GD N+  +  D  N       A F    R
Sbjct: 122 TAKQDEKWRFLDGMERRLPEIAAHSELAVVVGDLNVGHRELDIRNWKGNVKRAGFLPRER 181

Query: 181 QSFQKLQN-----------------MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223
               ++                          +   +    Y++W +   ++  + G RI
Sbjct: 182 AYLDRILGARGEEITGVDGSTGPGLGWVDVGRQQAGEVDGPYTWWSWRGKAFDNDTGWRI 241

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           D+ + +P     +    +D       + SDHTPV+V   I
Sbjct: 242 DYQLATPALAEKVVGYAVDRAEAYDQRWSDHTPVVVDYAI 281


>gi|229366136|gb|ACQ58048.1| DNA-apurinic or apyrimidinic site lyase [Anoplopoma fimbria]
          Length = 310

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 79/266 (29%), Positives = 139/266 (52%), Gaps = 16/266 (6%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQ----SLNYHIE 58
           + + +WNV+ +RA +  N   W++E  PD++CLQETK  +K  P E          Y   
Sbjct: 55  MKITSWNVDGLRAWVKKNGLDWVREEAPDVLCLQETKCSEKALPAEITSMPEYPHKYWAA 114

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
           +  ++ Y+GVA+L K +P+++   +  ++ D + R I A F        +   Y+P+ + 
Sbjct: 115 SDEKQGYSGVAMLCKTEPLKVTYGIGKEEHDKEGRVITAEFP----NFYLVTTYVPNSS- 169

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
               + D + +W + F  + S+ L++++PL+  GD N+  Q  D  NP   + +A FT+E
Sbjct: 170 KGLVRLDYRKTWDEDFRAYLSE-LDMQKPLVLCGDLNVAHQEIDLKNPKGNKKNAGFTVE 228

Query: 179 VRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
            R+ F +L   GF D+ R  +    + Y+FW Y  +S  KN G R+D+ +LS      L 
Sbjct: 229 EREGFGQLLGSGFADSFRELYPEQANAYTFWTYMMNSRGKNVGWRLDYFLLSSSLLPGLC 288

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263
            ++I +K  G    SDH P+ + + +
Sbjct: 289 DSKIRSKALG----SDHCPITLHIAV 310


>gi|323473589|gb|ADX84195.1| exodeoxyribonuclease III Xth [Sulfolobus islandicus REY15A]
          Length = 247

 Score =  157 bits (396), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 68/261 (26%), Positives = 111/261 (42%), Gaps = 18/261 (6%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + +WNVN IRA +  NL  +I+ N  ++I  QETK    +        + Y + +   
Sbjct: 1   MKIVSWNVNGIRAALKKNLIDFIENNMFEVIMFQETK---GDIVPLDFIMMGYEVISFPA 57

Query: 62  -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GV  L+K +PI ++  L   + D + R +            I   +   G+ + 
Sbjct: 58  KRKGYSGVMTLTKIKPINVIKGLQIKEFDDEGRTVTLELK---DFYVINAYFPRAGDNLE 114

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
              +  K +            L   +P+I  GD+NI  Q  D             T + R
Sbjct: 115 RLDFKLKFNNEIENFVLK---LRRAKPVILCGDFNIAHQNIDGAFSDP--TIPGLTPQER 169

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
             F    ++GF D  R  H     YS+W Y   +  KN G+R+D+ ++S E    +  A 
Sbjct: 170 SWFSHFLSLGFIDTFRYLHPNVRKYSWWSYMGKAREKNLGLRLDYCIVSEELKDRIKMAD 229

Query: 241 IDTKPRGWTKPSDHTPVIVSL 261
           I    +G    SDH P+I+ L
Sbjct: 230 ILIDIQG----SDHAPIILEL 246


>gi|227826512|ref|YP_002828291.1| exodeoxyribonuclease III Xth [Sulfolobus islandicus M.14.25]
 gi|229583674|ref|YP_002842175.1| exodeoxyribonuclease III Xth [Sulfolobus islandicus M.16.27]
 gi|227458307|gb|ACP36993.1| exodeoxyribonuclease III Xth [Sulfolobus islandicus M.14.25]
 gi|228018723|gb|ACP54130.1| exodeoxyribonuclease III Xth [Sulfolobus islandicus M.16.27]
          Length = 247

 Score =  157 bits (396), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 68/261 (26%), Positives = 111/261 (42%), Gaps = 18/261 (6%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + +WNVN IRA +  NL  +I+ N  ++I  QETK    +        + Y + +   
Sbjct: 1   MKIVSWNVNGIRAALKKNLIDFIENNMFEVIMFQETK---GDIVPLDFIMMGYEVISFPA 57

Query: 62  -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GV  L+K +PI ++  L   + D + R +            I   +   G+ + 
Sbjct: 58  RRKGYSGVMTLTKIKPINVIKGLQIKEFDDEGRTVTLELK---DFYVINAYFPRAGDNLE 114

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
              +  K +            L   +P+I  GD+NI  Q  D             T + R
Sbjct: 115 RLDFKLKFNNEIENFVLK---LRKAKPVILCGDFNIAHQNIDGAFSDP--TIPGLTPQER 169

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
             F    ++GF D  R  H     YS+W Y   +  KN G+R+D+ ++S E    +  A 
Sbjct: 170 SWFSHFLSLGFIDTFRYLHPNVRKYSWWSYMGKAREKNLGLRLDYCIVSEELKDRIKMAD 229

Query: 241 IDTKPRGWTKPSDHTPVIVSL 261
           I    +G    SDH P+I+ L
Sbjct: 230 ILIDIQG----SDHAPIILEL 246


>gi|296454347|ref|YP_003661490.1| exodeoxyribonuclease III Xth [Bifidobacterium longum subsp. longum
           JDM301]
 gi|296183778|gb|ADH00660.1| exodeoxyribonuclease III Xth [Bifidobacterium longum subsp. longum
           JDM301]
          Length = 286

 Score =  157 bits (396), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 62/286 (21%), Positives = 104/286 (36%), Gaps = 26/286 (9%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI---- 57
            +T+ T NVN IRA     +  W  ++  D+ C+QE +    +          +      
Sbjct: 2   TITITTSNVNGIRAAKRKGIEDWAGKHASDVWCIQEVRAPQDDVDS-IFDEFGFEYATAG 60

Query: 58  ------------ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR--FIEATFTINT 103
                       E C  K   GV +L+  + ++    LPG   DV +         T   
Sbjct: 61  KIEAPANLHAMNEVCRVKGRAGVGLLTDLEVLDKRYGLPGLSEDVDSGRWIETDVKTPEG 120

Query: 104 QTLRIGNLYLPHGNPITS----TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159
             + + ++Y+  GN         KY    + +KR      +     +  +  GD+NI   
Sbjct: 121 YAITVASVYVHAGNTDDPTKMEQKYRFLDTMLKRMGALRDEAAHGGKQAVLCGDFNIAHT 180

Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSWSK 217
           P D  N    E  A F  E R    K  +      +  +   D    Y++W     ++  
Sbjct: 181 PLDIKNAKANEKHAGFLPEERAYVDKWLDEYEFVDVMRSLAGDIQGPYTWWSQRGRAFDN 240

Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           N G RID+   +PE         ID  P    + SDH P+ ++ ++
Sbjct: 241 NVGWRIDYQFATPELAETARGFVIDKAPTYDKRWSDHAPLTITYEV 286


>gi|170783171|ref|YP_001711505.1| putative nuclease [Clavibacter michiganensis subsp. sepedonicus]
 gi|169157741|emb|CAQ02943.1| putative nuclease [Clavibacter michiganensis subsp. sepedonicus]
          Length = 281

 Score =  157 bits (396), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 57/280 (20%), Positives = 107/280 (38%), Gaps = 19/280 (6%)

Query: 2   SVVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           S + VA+ N N IRA     +  W+   + DI+ +QE + E  +         N   +  
Sbjct: 3   SNLRVASINTNGIRAAFRKGMGDWLDTRDVDILAIQEVRAETSDIEGLLGPEWNVLHDAA 62

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
             K   GVAI S+ +       +  +D D   R++EA + ++   + + + Y+  G  + 
Sbjct: 63  TAKGRAGVAIASRRRAEIHRVAIGAEDFDSAGRWLEADYDVDGTIVTVVSAYVHSGE-VG 121

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
           + K D+K  ++    +   +  E  E  +  GD N+  +  D  N       A F    R
Sbjct: 122 TAKQDEKWRFLDGMEKRLPEIAEHSELAVVVGDLNVGHRELDIRNWKGNVKRAGFLPRER 181

Query: 181 QSFQKLQN-----------------MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223
               ++                          +   +    Y++W +   ++  + G RI
Sbjct: 182 AYLDRILGARGEDVTGVDGSTGPGLGWVDVGRQQAGEVDGPYTWWSWRGKAFDNDTGWRI 241

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           D+ + +P     +    +D       + SDHTPV+V   I
Sbjct: 242 DYQLATPALAEKVVGYAVDRAEAYDKRWSDHTPVVVDYAI 281


>gi|326523229|dbj|BAJ88655.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 531

 Score =  157 bits (396), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 68/270 (25%), Positives = 122/270 (45%), Gaps = 19/270 (7%)

Query: 4   VTVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTEDKN---FPFETLQSL--N 54
           + + +WNVN +RA + +    +    +  + D++CLQETK ++K+        L+    +
Sbjct: 271 LKILSWNVNGLRALVKSRGFSIHELAQREDFDVLCLQETKMQEKDVEVIKESLLEGYTNS 330

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           +   +  +  Y+G AI+S+ +P+ I   L   D D + R +   F        +   Y+P
Sbjct: 331 FWTCSVSKLGYSGTAIISRVKPLSIKYGLGVPDHDTEGRIVTVEFD----DFYLLTAYVP 386

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
           +       +   +++     L    + LE  +P+I  GD N   Q  D ++P      A 
Sbjct: 387 NSG-DGLKRLTYRVTEWDPCLGNYMKELEKSKPVILTGDLNCAHQEIDIHDPAGNSRSAG 445

Query: 175 FTLEVRQSFQKLQ-NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
           FT E R+SF+    + GF D  R  H     YS+W Y  +    N+G R+D+ ++S    
Sbjct: 446 FTKEERKSFETNFLSKGFVDTFRKQHPDVVGYSYWGYRHNCRKTNRGWRLDYFLVSESIA 505

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             +H + I          SDH+P+ + L +
Sbjct: 506 ERIHDSYILPDV----SASDHSPLGLILKL 531


>gi|296272687|ref|YP_003655318.1| exodeoxyribonuclease III [Arcobacter nitrofigilis DSM 7299]
 gi|296096861|gb|ADG92811.1| exodeoxyribonuclease III [Arcobacter nitrofigilis DSM 7299]
          Length = 261

 Score =  157 bits (396), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 65/266 (24%), Positives = 109/266 (40%), Gaps = 8/266 (3%)

Query: 1   MSVVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI-E 58
           M+     +WNVN IRA        W+ E++  ++ +QETK+     P    +    +I  
Sbjct: 1   MNKYKFVSWNVNGIRAVDKKEALKWVDEHDIHLLGVQETKSMKTQIPETIFEKNFKNITA 60

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
           +           L     I      P  D+  + R  E  FT+  + +   N+Y P+G  
Sbjct: 61  SESAIKGRSGTALFTDIDITFECTCPTVDVLDEGRINEVHFTLGDKDIAFFNVYFPNGQS 120

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
                   K+ +  RFL       +  + +I  GD N   +  D   P   E  + F   
Sbjct: 121 KEER-LVYKMEFYDRFLDHCESLKKQGKSIIVCGDVNTAHKEIDLARPKANEGTSGFLPM 179

Query: 179 VRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
            R+   K  + G+ D +R    D    YS+W Y A++ + N G RID+  +S +    + 
Sbjct: 180 EREWIDKFLSHGYIDTLRHVIGDEPDNYSWWSYRANARANNVGWRIDYFYVSEDLKEHIS 239

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +A I +   G    SDH P+ + ++I
Sbjct: 240 NAYIMSDIMG----SDHCPIALEMEI 261


>gi|310287159|ref|YP_003938417.1| Exodeoxyribonuclease III [Bifidobacterium bifidum S17]
 gi|309251095|gb|ADO52843.1| Exodeoxyribonuclease III [Bifidobacterium bifidum S17]
          Length = 285

 Score =  157 bits (396), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 63/286 (22%), Positives = 96/286 (33%), Gaps = 26/286 (9%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI---- 57
           ++T+ T NVN IRA     +  W  E+ PDI C+QE +               +      
Sbjct: 1   MITITTSNVNGIRAAKRKGIETWAGEHAPDIWCMQEVRAPQDELNP-IFGEFGFEYATAG 59

Query: 58  ------------ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR--FIEATFTINT 103
                       E C  K   GV +L+          L G D DV +         T   
Sbjct: 60  KIADQSELTAMNEVCRVKGRAGVGLLTDLPVTARRYGLSGLDEDVDSGRWIEADVTTPQG 119

Query: 104 QTLRIGNLYLPHGNPITS----TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159
             + +  +Y+  GN         KY    + + R      +        +  GD+NI   
Sbjct: 120 YGITVACVYVHAGNSDDPVKMAQKYRFLDTMLTRMGELRDEASRGGRQAVLCGDFNIAHT 179

Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSWSK 217
           P D  N       A F    R    +         +  +   D    Y++W     ++  
Sbjct: 180 PLDIKNAKANIKHAGFLPAERAYIDRWLGEYEFVDVIRSLAGDIQGPYTWWSQRGRAFDN 239

Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           N G RID+   +PE         ID  P    + SDH P+ V+ D+
Sbjct: 240 NVGWRIDYQFATPELAETARGFVIDKAPSYDARWSDHAPLTVTYDV 285


>gi|193215004|ref|YP_001996203.1| exodeoxyribonuclease III Xth [Chloroherpeton thalassium ATCC 35110]
 gi|193088481|gb|ACF13756.1| exodeoxyribonuclease III Xth [Chloroherpeton thalassium ATCC 35110]
          Length = 281

 Score =  157 bits (396), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 65/265 (24%), Positives = 110/265 (41%), Gaps = 10/265 (3%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFP--FETLQSLNYHIETC 60
           + TV+TWN+N IRAR  +L  W+  N PDI+ LQE K +    P  F  L   +      
Sbjct: 23  IFTVSTWNINGIRARKDSLVDWLASNKPDILFLQEIKADIAKIPPVFSELPDYDAFWNDS 82

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
             K       +   + ++     P   +               QT+ IG           
Sbjct: 83  TFKGGYSGTGILVKKSLKESLGNPIFSIPEFDAENRIVEAAFKQTVLIGIY---TPRGEK 139

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
              Y+ K+  +++    A   ++    ++  GD+N+     D ++     N      + R
Sbjct: 140 DDHYELKLQMLEQLTLRAQGLMQNGADVLICGDFNVAHTEKDVHSSQNKPNATGLRPKER 199

Query: 181 QSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
            +  +L + G  D  RA +  +  L+++W Y+  +  KN G RID   +SP+  +     
Sbjct: 200 AAIDRLLSAGLIDITRALYPDNSELFTWWPYWKGAREKNLGWRIDCFYVSPQLATRTRKV 259

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIP 264
            +DT+     K SDH+PV + LD P
Sbjct: 260 EVDTE----EKSSDHSPVTLVLDFP 280


>gi|242054695|ref|XP_002456493.1| hypothetical protein SORBIDRAFT_03g037240 [Sorghum bicolor]
 gi|241928468|gb|EES01613.1| hypothetical protein SORBIDRAFT_03g037240 [Sorghum bicolor]
          Length = 511

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 65/272 (23%), Positives = 116/272 (42%), Gaps = 23/272 (8%)

Query: 4   VTVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTEDKNFPFETLQS---LNYH 56
           + + +WNVN ++A + +    +    +  + D++CLQETK ++K+   E ++      Y 
Sbjct: 251 LKIMSWNVNGLKALLKSRGFSVQQLAQREDFDVLCLQETKMQEKDV--EVIKDTLLDGYT 308

Query: 57  IETCGQK----SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
                       Y+G AI+S+ +P+ I   L   D D + R +   F        +   Y
Sbjct: 309 NSFFTCSVSKLGYSGTAIISRVKPLSIKYGLGIPDHDTEGRVVTVEFD----DFYLLTAY 364

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
           +P+       +   +++     L    + LE  +P+I  GD N   Q  D ++P      
Sbjct: 365 VPNSG-DGLKRLTYRVTEWDPSLGNYMKELEKSKPVILTGDLNCAHQEIDIHDPAGNRKS 423

Query: 173 ACF-TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
           A F   E         + GF D  R  H +   YS+W Y  ++   NKG R+D+ ++S  
Sbjct: 424 AGFTNEERESFETNFLSKGFVDTFRKQHPSVVAYSYWGYRHNARKTNKGWRLDYFLVSES 483

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
               +H + I          SDH+P+ + L +
Sbjct: 484 IAEKVHDSYILPDI----SASDHSPLGLVLKL 511


>gi|187479651|ref|YP_787676.1| catabolite repression control protein [Bordetella avium 197N]
 gi|115424238|emb|CAJ50791.1| catabolite repression control protein [Bordetella avium 197N]
          Length = 260

 Score =  156 bits (395), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 63/266 (23%), Positives = 116/266 (43%), Gaps = 15/266 (5%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNF--PFETLQSLNYHIET 59
           ++ V + N+N IR+        W+ + N D +C+QE K ++ +     +    L  +   
Sbjct: 1   MLRVISANLNGIRSANTKGFFDWLHQQNADFVCVQELKAQEADLSPAMKAPAPLQGYFHY 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GV I + ++P  +V  L   D+D + R+IE    +    L + ++YLP G+  
Sbjct: 61  AEKKGYSGVGIYTPHEPESVVIGLGVPDIDAEGRYIE----LVYPKLSVVSVYLPSGS-S 115

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +   K  +++ F R  +  +     ++  GD+NI  +  D  N      ++ F  E 
Sbjct: 116 GDHRQTAKYRFMEHFYRHLADLIGRGREVVICGDWNIAHKEADLKNWKGNLKNSGFLPEE 175

Query: 180 RQSFQKLQNMGFTDAI---RATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
           R    ++ +      +    A   T   Y++W     +W+KN G RID+ + S    +  
Sbjct: 176 RAWLTQVFDELKWVDVYRRLAPDATGEGYTWWSNRGQAWAKNVGWRIDYHIASGALAATA 235

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLD 262
             A I    R     SDH P+ +  D
Sbjct: 236 QQAAIYKDVR----FSDHAPLTIDYD 257


>gi|332183996|gb|AEE26250.1| Exodeoxyribonuclease III [Francisella cf. novicida 3523]
          Length = 262

 Score =  156 bits (395), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 65/268 (24%), Positives = 115/268 (42%), Gaps = 17/268 (6%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIE 58
           +  V T+N N IRA        W    + D +C+QETK +      +         Y  +
Sbjct: 1   MTKVMTFNANGIRAAARKGFWEWFVTQDVDFLCIQETKAQFHQLEKDEQHFPDGYYYDFK 60

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
              +K Y+G AI +K +P++++  L  D  D + R+I+  +    Q   I +LYLP G+ 
Sbjct: 61  DAVKKGYSGTAIYAKKKPLKVIKELGLDWADDEGRYIQFDY----QKFSIASLYLPSGS- 115

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF--T 176
               + + K+ ++KR+     +++E     I  GD+NI+ +  D  N             
Sbjct: 116 SGDVRQEYKMQFLKRYKEILKEQVESGRDFIVCGDFNIVHKEIDIKNWKSNYGKTSGVLP 175

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
            E         ++G+ D  R  ++    Y++W     + + N G RID+ + +P     +
Sbjct: 176 EEQAWLDHIFDDLGWVDTFRVINNEPLQYTWWSNRGQARANNVGWRIDYHISTPALKDKV 235

Query: 237 --HSARIDTKPRGWTKPSDHTPVIVSLD 262
              S  I  +       SDH P+ +S D
Sbjct: 236 VPKSDYIYKE----NWFSDHAPLTISYD 259


>gi|170582912|ref|XP_001896345.1| exodeoxyribonuclease III family protein [Brugia malayi]
 gi|158596475|gb|EDP34813.1| exodeoxyribonuclease III family protein [Brugia malayi]
          Length = 314

 Score =  156 bits (395), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 59/263 (22%), Positives = 101/263 (38%), Gaps = 10/263 (3%)

Query: 4   VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNV  +RA    N  + + E NPDII LQETK  D   P E     +  +    +
Sbjct: 59  IKIISWNVAGLRALIKKNGHSVLVEENPDIIALQETKCVD--VPSELQNGYHTFLNASEK 116

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
             + GV +L+K +PI++                +    I               +     
Sbjct: 117 SGHGGVLLLTKEEPIKVTYSFDDKSKCDIDGNGKGRIIIAEYESYYLINAYVPNSGRGLV 176

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA--CFTLEVR 180
             D K      +     ++L+L +P+++ GD N+  Q  D  NP    N        E  
Sbjct: 177 NLD-KRKIWDDYYLTFIKKLDLSKPVVYVGDLNVAHQEIDLANPKTNRNKTAGFTDQERN 235

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
              + L         R   D    Y+FW    ++  KN G R+D+ ++S    + +    
Sbjct: 236 DFTRLLDAGFVDVFRRLNPDKEGAYTFWSNMHNAREKNVGWRLDYFVVSERIMNKVKKCD 295

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263
           I        K SDH P+ +++++
Sbjct: 296 ILHSI----KGSDHCPLSLTIEL 314


>gi|89256562|ref|YP_513924.1| exodeoxyribonuclease III [Francisella tularensis subsp. holarctica
           LVS]
 gi|115314993|ref|YP_763716.1| exodeoxyribonuclease III [Francisella tularensis subsp. holarctica
           OSU18]
 gi|156502683|ref|YP_001428748.1| exodeoxyribonuclease III [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|167010026|ref|ZP_02274957.1| exodeoxyribonuclease III [Francisella tularensis subsp. holarctica
           FSC200]
 gi|254367881|ref|ZP_04983901.1| exodeoxyribonuclease III [Francisella tularensis subsp. holarctica
           257]
 gi|254369453|ref|ZP_04985465.1| exodeoxyribonuclease III [Francisella tularensis subsp. holarctica
           FSC022]
 gi|290954628|ref|ZP_06559249.1| short chain dehydrogenase [Francisella tularensis subsp. holarctica
           URFT1]
 gi|295311920|ref|ZP_06802747.1| short chain dehydrogenase [Francisella tularensis subsp. holarctica
           URFT1]
 gi|89144393|emb|CAJ79683.1| Exodeoxyribonuclease III [Francisella tularensis subsp. holarctica
           LVS]
 gi|115129892|gb|ABI83079.1| exodeoxyribonuclease III [Francisella tularensis subsp. holarctica
           OSU18]
 gi|134253691|gb|EBA52785.1| exodeoxyribonuclease III [Francisella tularensis subsp. holarctica
           257]
 gi|156253286|gb|ABU61792.1| exodeoxyribonuclease III [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|157122403|gb|EDO66543.1| exodeoxyribonuclease III [Francisella tularensis subsp. holarctica
           FSC022]
          Length = 262

 Score =  156 bits (395), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 61/268 (22%), Positives = 114/268 (42%), Gaps = 17/268 (6%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIE 58
           ++ V T+N N IRA        W K  + D +C+QETK +      +         Y  +
Sbjct: 1   MIKVMTFNANGIRAAARKGFWEWFKTQDVDFLCMQETKAQFHQLEKDIEHFPTGYYYEFK 60

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
              +K Y+G AI +K +P++++  L  D  D + R+I+  +        I +LYLP G+ 
Sbjct: 61  DAVKKGYSGTAIYAKKKPLKVIKELGLDWADDEGRYIQFDYE----NFSIASLYLPSGS- 115

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF--T 176
               + + K+ ++K++     +++E     I  GD+NI+ +  D  N             
Sbjct: 116 SGDVRQEYKMQFLKKYKEILKEQVESGRDFIVCGDFNIVHKEIDIKNWKSNYGKTSGVLP 175

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
            E         ++G+ D  R  +     Y++W     + + N G RID+ + +      +
Sbjct: 176 EEQAWLDHIFDDLGWVDTFRVINHEPLQYTWWSNRGQARANNVGWRIDYHISTSALKDKV 235

Query: 237 H--SARIDTKPRGWTKPSDHTPVIVSLD 262
              S  +  +       SDH P+ ++ D
Sbjct: 236 VPESDYVYKE----NWFSDHAPLTINYD 259


>gi|56708053|ref|YP_169949.1| exodeoxyribonuclease III [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110670524|ref|YP_667081.1| exodeoxyribonuclease III [Francisella tularensis subsp. tularensis
           FSC198]
 gi|134301867|ref|YP_001121836.1| exodeoxyribonuclease III [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|187931705|ref|YP_001891689.1| exodeoxyribonuclease III [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|224457140|ref|ZP_03665613.1| exodeoxyribonuclease III [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|254370539|ref|ZP_04986544.1| hypothetical protein [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254874855|ref|ZP_05247565.1| xthA, exodeoxyribonuclease III [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|56604545|emb|CAG45592.1| Exodeoxyribonuclease III [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110320857|emb|CAL08975.1| Exodeoxyribonuclease III [Francisella tularensis subsp. tularensis
           FSC198]
 gi|134049644|gb|ABO46715.1| exodeoxyribonuclease III [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|151568782|gb|EDN34436.1| hypothetical protein FTBG_00321 [Francisella tularensis subsp.
           tularensis FSC033]
 gi|187712614|gb|ACD30911.1| exodeoxyribonuclease III [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|254840854|gb|EET19290.1| xthA, exodeoxyribonuclease III [Francisella tularensis subsp.
           tularensis MA00-2987]
          Length = 262

 Score =  156 bits (395), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 60/268 (22%), Positives = 114/268 (42%), Gaps = 17/268 (6%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIE 58
           ++ V T+N N IRA        W K  + D +C+QETK +      +         Y  +
Sbjct: 1   MIKVMTFNANGIRAAARKGFWEWFKTQDVDFLCMQETKAQFHQLEKDIEHFPTGYYYEFK 60

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
              +K Y+G AI +K +P++++  L  D  D + R+I+  +        I +LYLP G+ 
Sbjct: 61  DAVKKGYSGTAIYAKKKPLKVIKELGLDWADDEGRYIQFDYE----NFSIASLYLPSGS- 115

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF--T 176
               + + K+ +++++     +++E     I  GD+NI+ +  D  N             
Sbjct: 116 SGDVRQEYKMQFLEKYKEILKEQVESGRDFIVCGDFNIVHKEIDIKNWKSNYGKTSGVLP 175

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
            E         ++G+ D  R  +     Y++W     + + N G RID+ + +      +
Sbjct: 176 EEQAWLDHIFDDLGWVDTFRVINHEPLQYTWWSNRGQARANNVGWRIDYHISTSALKDKV 235

Query: 237 H--SARIDTKPRGWTKPSDHTPVIVSLD 262
              S  +  +       SDH P+ ++ D
Sbjct: 236 VPESDYVYKE----NWFSDHAPLTINYD 259


>gi|241668560|ref|ZP_04756138.1| DNA-(apurinic or apyrimidinic site) lyase [Francisella philomiragia
           subsp. philomiragia ATCC 25015]
 gi|254877094|ref|ZP_05249804.1| exodeoxyribonuclease III [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254843115|gb|EET21529.1| exodeoxyribonuclease III [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 262

 Score =  156 bits (395), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 61/268 (22%), Positives = 113/268 (42%), Gaps = 17/268 (6%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIE 58
           ++ V T+N N IRA        W    + D +C+QETK +      +         Y  +
Sbjct: 1   MIKVMTFNANGIRAAARKGFWEWFATQDVDFLCIQETKAQFHQLEKDEQHFPDGYYYDFK 60

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
              +K Y+G AI +K +P++++  L  D  D + R+I+  +        I +LYLP G+ 
Sbjct: 61  DAVKKGYSGTAIYAKKKPLKVIKELGLDWADDEGRYIQFDYE----NFSIASLYLPSGS- 115

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF--T 176
               + + K+ +++++     ++ E     I  GD+NI+ +  D  N             
Sbjct: 116 SGDVRQEYKMQFLEKYKEILKEQTESGRDFIVCGDFNIVHKEVDIKNWKSNYGKTSGVLP 175

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
            E         ++G+ D  R  +     Y++W     + + N G RID+ + +P     +
Sbjct: 176 EEQAWLDHIFDDLGWVDTFRVINHEPLQYTWWSNRGQARANNVGWRIDYHISTPTLKDKV 235

Query: 237 H--SARIDTKPRGWTKPSDHTPVIVSLD 262
              S  +  +       SDH P+ +S D
Sbjct: 236 VPESDYVYKE----NWFSDHAPLTISYD 259


>gi|325182155|emb|CCA16608.1| exodeoxyribonuclease putative [Albugo laibachii Nc14]
          Length = 375

 Score =  156 bits (395), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 59/268 (22%), Positives = 100/268 (37%), Gaps = 13/268 (4%)

Query: 4   VTVATWNVNSIRARIHN-----LAAWIKENNPDIICLQETKTEDKNFPF--ETLQSLNYH 56
           + +  WNVN +RA +         A+++E + DIICL ETK +        + L    + 
Sbjct: 113 LKIIAWNVNGLRALLKYDESRYFHAYVREEDADIICLSETKIDSPQVEKMEDLLPKYPFQ 172

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
             +C  K       +        V     D                   L +       G
Sbjct: 173 YWSCAHKKGYAGTAVCSKLEPLQVRSHLDDSTLGSTEGRFLALEFEKFWL-VHTYVPNAG 231

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC-F 175
             +                   S   E E+ +I+ GD N+  Q  D ++P    N +  F
Sbjct: 232 MKLERLGDRTTQWDAVLLQTLQSLEKESEKGVIWCGDLNVAHQDIDIHDPKNNRNKSPGF 291

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
           T   R +F +    GF D  R  H     +++W Y  ++ ++NKG R+D+ ++S    + 
Sbjct: 292 TDAERNNFGETLKTGFVDTFRHFHPEKQQFTYWSYRFNARTRNKGWRLDYFVVSERLMAQ 351

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           + ++ +    R   K SDH PV   L +
Sbjct: 352 VKASFV----REGVKGSDHVPVGAILSL 375


>gi|260219779|emb|CBA26652.1| hypothetical protein Csp_H39670 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 263

 Score =  156 bits (394), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 68/266 (25%), Positives = 109/266 (40%), Gaps = 12/266 (4%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFP--FETLQSLNYHIET 59
           +  + + N+N IR+     L AW+ +  PD IC+QE K +  +    FE    L  H   
Sbjct: 1   MFKLTSLNLNGIRSATSKGLEAWLTQAQPDCICVQEVKAQAPDIAGRFEYFGELQGHFHF 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GV + +K+ P ++       + D + R++E  F   ++   I + Y P G+  
Sbjct: 61  AEKKGYSGVGVYTKHAPSDVRIGYGSAEFDAEGRYVELRFDTPSRKFSIISAYFPSGSSG 120

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                               Q+L  E  L+  GD NI  Q  D  N    + ++ F  E 
Sbjct: 121 EER--QAAKFRFLAEFYPHLQQLRAERELVLCGDLNIAHQEVDLKNWKGNKKNSGFLPEE 178

Query: 180 RQSFQKL-QNMGFTDAIRATHDT--HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
           R    K     G  D  R    T     Y++W     +++KN G R+D+ + +P   +  
Sbjct: 179 RAWMSKALSEGGLVDVYRQLEPTATDDCYTWWSNRGQAYAKNVGWRLDYHLATPALAATA 238

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLD 262
               I        K SDH P+ VS D
Sbjct: 239 KEVAIYKA----EKFSDHAPITVSYD 260


>gi|262201711|ref|YP_003272919.1| exodeoxyribonuclease III Xth [Gordonia bronchialis DSM 43247]
 gi|262085058|gb|ACY21026.1| exodeoxyribonuclease III Xth [Gordonia bronchialis DSM 43247]
          Length = 278

 Score =  156 bits (394), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 70/278 (25%), Positives = 114/278 (41%), Gaps = 18/278 (6%)

Query: 1   MSVVTVATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKNFPFETLQ-- 51
           MS +T++T NVN IRA +         L+AW+ +  PD++ LQE +   +          
Sbjct: 1   MS-LTISTINVNGIRAAMKQRSEANRGLSAWLDDVRPDVVLLQEIRAGREQAQEALAPVL 59

Query: 52  SLNYHIETCG--QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
              +H+       K + GV +LS+ +P  +      D+ D   R++EA F      L   
Sbjct: 60  DDGWHLVMSESVIKGHAGVGVLSRVEPSAVRVGFGSDEFDATGRYLEADFDTPLGALTAA 119

Query: 110 NLYLPHG-----NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
           +LYLP G      P    K+D+KI ++  F       +     ++  GD+NI     D  
Sbjct: 120 SLYLPKGAAQTDEPKDIAKHDEKIRFMTAFAEHLRGLVRRRRHVVVGGDWNIAHAEADIK 179

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRI 223
           N         F    R    +    G+ D +R  +      YS+W +   ++  + G RI
Sbjct: 180 NWKGNRKSPGFLPHERDWVGEQLAGGWRDVVREQYPDDDGPYSWWSWRGKAFDNDAGWRI 239

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           D+ + +         A +D  P    + SDH PV V  
Sbjct: 240 DYQLTNRSLAQRAVKATVDRAPAYDLRWSDHAPVTVKF 277


>gi|254374251|ref|ZP_04989733.1| exodeoxyribonuclease III [Francisella novicida GA99-3548]
 gi|151571971|gb|EDN37625.1| exodeoxyribonuclease III [Francisella novicida GA99-3548]
          Length = 262

 Score =  156 bits (393), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 64/268 (23%), Positives = 115/268 (42%), Gaps = 17/268 (6%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIE 58
           ++ V T+N N IRA        W K  + D +C+QETK +      +         Y  +
Sbjct: 1   MIKVMTFNANGIRAAARKGFWEWFKTQDVDFLCIQETKAQFHQLEKDEQHFPDGYYYDFK 60

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
              +K Y+G AI +K +P++I+  L  D  D + R+I+  +        I +LYLP G+ 
Sbjct: 61  DAVKKGYSGTAIYAKKKPLKIIKELGLDWADDEGRYIQFDYE----NFSIASLYLPSGS- 115

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF--T 176
               + + K+ +++++     +++E     I  GD+NI+ +  D  N             
Sbjct: 116 SGDMRQEYKMQFLEKYKEILKEQVESGRDFIVCGDFNIVHKEIDIKNWKSNYGKTSGVLP 175

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
            E         ++G+ D  R  +     Y++W     + + N G RID+ + +P     +
Sbjct: 176 EEQAWLDHIFDDLGWVDIFRVINHEPLQYTWWSNRGQARANNVGWRIDYHISTPTIKDKV 235

Query: 237 H--SARIDTKPRGWTKPSDHTPVIVSLD 262
              S  I  +       SDH P+ +S D
Sbjct: 236 VPESDYIYRE----NWFSDHAPLTISYD 259


>gi|294339964|emb|CAZ88327.1| putative Nuclease [Thiomonas sp. 3As]
          Length = 267

 Score =  156 bits (393), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 61/267 (22%), Positives = 109/267 (40%), Gaps = 15/267 (5%)

Query: 4   VTVATWNVNSIR-ARIHNLAAWIKEN-NPDIICLQETKTEDKNFPFET--LQSL-NYHIE 58
           + V T N+N +R A    +  W++    PD++C+QE K  + +       L  L     +
Sbjct: 6   LRVTTLNLNGVRSAANKGVDDWLRSQARPDVLCVQELKALEADMTPSLRTLGGLPGAAFQ 65

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ-TLRIGNLYLPHGN 117
              +  Y+GV +  K++P E+       + D + R++EA +  +    L I + Y P G+
Sbjct: 66  HAEKPGYSGVGLYWKHEPDEVRIGFGHAEFDAEGRYVEAIYKRSGGGRLSIVSAYFPSGS 125

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
                +                  L+    ++  GD NI  +  D  N      ++ F  
Sbjct: 126 SSEERQQA--KFRFLADFHEHLLALKAAGEVLLCGDVNIAHKEIDLKNWKGNLKNSGFLP 183

Query: 178 EVRQSFQKLQNMG-FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
           E R    +L +   + D  R      + Y++W     + +KN G RID+ + +P   +  
Sbjct: 184 EERAWMTRLIDEAGYVDVFRQLDPAPNRYTWWSNRGQARAKNVGWRIDYHLATPGIAAQA 243

Query: 237 H--SARIDTKPRGWTKPSDHTPVIVSL 261
              SA I T+ R     SDH P+ +  
Sbjct: 244 KSDSAWIYTEQR----FSDHAPLTIDY 266


>gi|218189226|gb|EEC71653.1| hypothetical protein OsI_04096 [Oryza sativa Indica Group]
          Length = 499

 Score =  156 bits (393), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 61/267 (22%), Positives = 110/267 (41%), Gaps = 13/267 (4%)

Query: 4   VTVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTEDKNFP--FETLQSLNYHI 57
           + + +WNVN ++A + +    +    +  + DI+CLQETK ++K+     E L     H 
Sbjct: 239 LKILSWNVNGLKALLKSRGFSIHQLAQREDFDILCLQETKMQEKDVEVIKEGLLEGYTHS 298

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
                 S  G +  +    ++ ++   G  +                   +       G+
Sbjct: 299 FWTCSVSKLGYSGTAIISRVKPLSIKYGLGVPDHDTEGRVVTVEFNDFYLLTAYVPNSGD 358

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
                +   +++     L    + LE  +P+I  GD N   Q  D ++P      A FT+
Sbjct: 359 --GLKRLTYRVTEWDPSLGNYMKDLEKSKPVILTGDLNCAHQEIDIHDPAGNRRSAGFTI 416

Query: 178 EVRQSFQKLQ-NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
           E R+SF+    + GF D  R  H     YS+W Y  ++   NKG R+D+ ++S      +
Sbjct: 417 EERESFETNFLSKGFVDTFRKQHPNVVGYSYWGYRHNARKTNKGWRLDYFLVSESIAERV 476

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263
           H + I          SDH+P+ + L +
Sbjct: 477 HDSYIIPDI----SASDHSPLGLVLKL 499


>gi|115440515|ref|NP_001044537.1| Os01g0801000 [Oryza sativa Japonica Group]
 gi|55296319|dbj|BAD68137.1| putative DNA-(apurinic or apyrimidinic site) lyase (ARP) [Oryza
           sativa Japonica Group]
 gi|55297696|dbj|BAD68286.1| putative DNA-(apurinic or apyrimidinic site) lyase (ARP) [Oryza
           sativa Japonica Group]
 gi|113534068|dbj|BAF06451.1| Os01g0801000 [Oryza sativa Japonica Group]
 gi|215715310|dbj|BAG95061.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222619408|gb|EEE55540.1| hypothetical protein OsJ_03774 [Oryza sativa Japonica Group]
          Length = 499

 Score =  156 bits (393), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 61/267 (22%), Positives = 110/267 (41%), Gaps = 13/267 (4%)

Query: 4   VTVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTEDKNFP--FETLQSLNYHI 57
           + + +WNVN ++A + +    +    +  + DI+CLQETK ++K+     E L     H 
Sbjct: 239 LKILSWNVNGLKALLKSRGFSIHQLAQREDFDILCLQETKMQEKDVEVIKEGLLEGYTHS 298

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
                 S  G +  +    ++ ++   G  +                   +       G+
Sbjct: 299 FWTCSVSKLGYSGTAIISRVKPLSIKYGLGVPDHDTEGRVVTVEFNDFYLLTAYVPNSGD 358

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
                +   +++     L    + LE  +P+I  GD N   Q  D ++P      A FT+
Sbjct: 359 --GLKRLTYRVTEWDPSLGNYMKDLEKSKPVILTGDLNCAHQEIDIHDPAGNRRSAGFTI 416

Query: 178 EVRQSFQKLQ-NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
           E R+SF+    + GF D  R  H     YS+W Y  ++   NKG R+D+ ++S      +
Sbjct: 417 EERESFETNFLSKGFVDTFRKQHPNVVGYSYWGYRHNARKTNKGWRLDYFLVSESIAERV 476

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263
           H + I          SDH+P+ + L +
Sbjct: 477 HDSYIIPDI----SASDHSPLGLVLKL 499


>gi|94987281|ref|YP_595214.1| exonuclease III [Lawsonia intracellularis PHE/MN1-00]
 gi|94731530|emb|CAJ54893.1| Exonuclease III [Lawsonia intracellularis PHE/MN1-00]
          Length = 259

 Score =  156 bits (393), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 70/267 (26%), Positives = 110/267 (41%), Gaps = 15/267 (5%)

Query: 2   SVVTVATWNVNSIRARIHNL-AAWIKENNPDIICLQETKTEDKNFPFETLQSLN---YHI 57
           S++ + +WN+N  RA I      W  EN  DII LQETK +         +      Y  
Sbjct: 3   SLLRLTSWNINGFRAIIKKPHWNWFHENQSDIIALQETKVDPSQLQDNLQKPEGWLSYWS 62

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
            +  +K Y+GVA+ SK +P+ +   LP      + R +   +        I       G+
Sbjct: 63  ASIKKKGYSGVAVFSKPKPLAVTAELPNPTFQGEGRLLHLEYPSFHFM-NIYFPNGTQGD 121

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
              S K               ++     +P++  GD+N   +P D   P   E  + F  
Sbjct: 122 HRLSYKLGY-----YDSFLNYAEEARKTKPIVVCGDFNTAHRPIDLARPKANEETSGFLP 176

Query: 178 EVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
             R    +    G+ D  R  H D  + YS+W Y   +  +N G RID+  +S E    +
Sbjct: 177 IERTWMDRFIAAGYIDTFRYVHGDIPNNYSWWSYQQRARERNVGWRIDYFFVSIELMPTI 236

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263
             A I+   +G    SDH PV ++L+I
Sbjct: 237 RDAWIEMDIQG----SDHCPVGLTLEI 259


>gi|308446216|ref|XP_003087123.1| hypothetical protein CRE_30356 [Caenorhabditis remanei]
 gi|308261295|gb|EFP05248.1| hypothetical protein CRE_30356 [Caenorhabditis remanei]
          Length = 297

 Score =  155 bits (392), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 54/283 (19%), Positives = 105/283 (37%), Gaps = 23/283 (8%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
            + VA+ NVN +RA     +  W+     D++ +QE + +D +             + C 
Sbjct: 14  TLRVASVNVNGVRAAFRKGMGDWLASRGVDVLAMQEVRADDSHLAELFGDEWQILHDPCN 73

Query: 62  QKSYNGVAILSKYQPIEIVTH----LPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
            K   GVAI S+   +            + +    R+IEA F +  + + + + Y   G 
Sbjct: 74  IKGRAGVAIASRVPAVAHRVGLGSAEDQERIQSSGRWIEADFEVGGELVTVISNYTHSGE 133

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
            + + + + K +++        Q     E +   GD+N+  +  D  N       + F  
Sbjct: 134 -VDTPRQEAKWAFLDAMGVRLDQLAAERELVTIVGDFNVGHREFDIKNWKGNVKRSGFLP 192

Query: 178 EVRQSFQKLQ-----------------NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG 220
             R  F +                   +       R   +    YS+W     ++  + G
Sbjct: 193 RERAYFDRFFGPRGETVVGVDGSEGVGHGWIDVGRRWAGEVDGPYSWWSNRGQAFDNDTG 252

Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            RID+ +++P+    + +  ID       + SDH PV+V   +
Sbjct: 253 WRIDYHVVTPQLGERVENYVIDRAASYDERWSDHAPVVVDYRV 295


>gi|4106095|gb|AAD02702.1| apurinic/apyrimidinic endonuclease [Cricetulus griseus]
          Length = 317

 Score =  155 bits (392), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 75/270 (27%), Positives = 127/270 (47%), Gaps = 17/270 (6%)

Query: 1   MSVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN----Y 55
           ++ + + +WNV+ +RA I      W+KE  PDI+CLQETK  +   P E          Y
Sbjct: 58  LATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQDLPGLTHQY 117

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
                 ++ Y+GV +LS+  P+++   +  ++ D + R I A F        +       
Sbjct: 118 WSAPSDKEGYSGVGLLSRQCPLKVSYGIGEEEHDQEGRVIVAEFDSF-----VLVTAYVP 172

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
                  + + +  W K F +F    L   +PL+  GD N+  +  D  NP   + +A F
Sbjct: 173 NAGRGLVRLEYRQRWDKAFCKFLKD-LASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGF 231

Query: 176 TL-EVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
           T  E +   + LQ +  TD+ R  +    + Y+FW Y  ++ +KN G R+D+ +LS    
Sbjct: 232 TPQERQGFGELLQAVPLTDSFRHLYPNTPYAYTFWTYMMNARAKNVGWRLDYFLLSHSLL 291

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           S L  ++I +K  G    SDH P+ + L +
Sbjct: 292 SSLCDSKIRSKALG----SDHCPITLYLAL 317


>gi|237747055|ref|ZP_04577535.1| exodeoxyribonuclease III [Oxalobacter formigenes HOxBLS]
 gi|229378406|gb|EEO28497.1| exodeoxyribonuclease III [Oxalobacter formigenes HOxBLS]
          Length = 260

 Score =  155 bits (392), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 67/268 (25%), Positives = 114/268 (42%), Gaps = 15/268 (5%)

Query: 3   VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS--LNYHIET 59
           + ++ T N+N IR A       W+ ++    +C+QE K +  +           + H   
Sbjct: 1   MFSITTANLNGIRSAVRKGFLEWMHQSGSHFVCVQEIKAQPDDIVPAIASPDLFHGHFGC 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GV I SK +P +++      + D + R+++  +        + +LY P G+  
Sbjct: 61  AEKKGYSGVGIYSKTKPDKVIRGFGCPEFDAEGRYLQCDYK----DFSLVSLYAPSGSSS 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                + K  ++  F  F  +  E E   I  GD+NI  +  D  N    + ++ F  E 
Sbjct: 117 PER-QEAKFRFMDHFFPFLEKLKESEREFIICGDWNIAHKEIDLKNWKSNQKNSGFLPEE 175

Query: 180 RQS-FQKLQNMGFTDAIRATHDT--HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
           R    + L  +G  D  R  H       Y++W     +W KN G RID+ + +P      
Sbjct: 176 RAWLSRILDELGLIDVYRCLHPDTTDASYTWWSNRGQAWQKNVGWRIDYQIATPGIAGKA 235

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDIP 264
            SA I  + R     SDH P+ +  DIP
Sbjct: 236 VSASIYKETR----FSDHAPLTIWYDIP 259


>gi|269987019|gb|EEZ93294.1| exodeoxyribonuclease III [Candidatus Parvarchaeum acidiphilum
           ARMAN-4]
          Length = 252

 Score =  155 bits (392), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 67/262 (25%), Positives = 113/262 (43%), Gaps = 13/262 (4%)

Query: 4   VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + +WNVN +R  AR + +   I     D+I LQETK E+ N   ET   + Y + +  
Sbjct: 1   MKILSWNVNGLRSVARKNEIQKIINSQIYDVILLQETKIEEINKLIETNGYVYYIMHSTV 60

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+GV    K  PI ++  +  +  D + R I            + + +      ++ 
Sbjct: 61  KKGYSGVITFCKETPINVIYGIGHEKYDNEGRVITIELK---DYFIVNSYFPNSRRDLSR 117

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
             +          +    ++L   +P++  GD+N+     D   P   + +A FT E R 
Sbjct: 118 LDF---KKDFNEKILEFLEKLRKRKPVVIGGDFNVAHTDLDIARPKQNDGNAGFTREERA 174

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD-SWSKNKGIRIDHIMLSPEATSLLHSAR 240
              K    G+ D  R  +     YS+W Y    + + N   RID+ ++S E  + + +A 
Sbjct: 175 FVDKFIEKGYIDTFRLFNKEGGNYSWWTYLYKSAKANNIAWRIDYFLVSSELKNKVKAAG 234

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I  K  G    SDH PV V +D
Sbjct: 235 IIKKQEG----SDHAPVFVEVD 252


>gi|94496587|ref|ZP_01303163.1| exonuclease III [Sphingomonas sp. SKA58]
 gi|94423947|gb|EAT08972.1| exonuclease III [Sphingomonas sp. SKA58]
          Length = 265

 Score =  155 bits (391), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 76/265 (28%), Positives = 121/265 (45%), Gaps = 11/265 (4%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCG 61
            +++ +WN+NS+RARI  +   ++E  PDI+CLQETK  ++ FP E  + L Y H    G
Sbjct: 4   TLSICSWNINSVRARIDIVEQLLREETPDILCLQETKVVNETFPTEMFRRLGYVHQVLNG 63

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           Q+ ++GVAILSK     +  H                       +RI N+Y+P G  +  
Sbjct: 64  QRMHHGVAILSK-----VPIHEDDRLDWQANGEARHVGVRLDNGVRIENVYVPAGGDVPD 118

Query: 122 TKYDDKISWIKRFLRFASQR--LELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-E 178
              + K      FL+   +      ++P I  GD+NI P   D ++     +    T  E
Sbjct: 119 RTVNPKFGQKLDFLQRMIEWSAALEDKPTILTGDFNIAPLECDVWSHRQLLDVVSHTPIE 178

Query: 179 VRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLL 236
                +   +  + D  R  H     LY++W Y A  W + ++G R+DH+ ++ +     
Sbjct: 179 CEILGRLQASNDWVDIGRHFHPAPARLYTWWSYRAKDWAASDRGRRLDHMWMTRDVAEKA 238

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSL 261
              R+    R W KPSDH P+I   
Sbjct: 239 VGHRVIEPARSWIKPSDHIPIITDF 263


>gi|262377172|ref|ZP_06070397.1| exodeoxyribonuclease III [Acinetobacter lwoffii SH145]
 gi|262307910|gb|EEY89048.1| exodeoxyribonuclease III [Acinetobacter lwoffii SH145]
          Length = 272

 Score =  155 bits (391), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 60/265 (22%), Positives = 108/265 (40%), Gaps = 7/265 (2%)

Query: 2   SVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIET 59
            ++ V + NVN +R+ +   L  W+++++ D+IC+QE++     +  +      Y H+  
Sbjct: 12  KILRVVSINVNGLRSSVTKGLLEWMEQSDADVICMQESRITHAQWTDKFKPEGWYTHLFP 71

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +  Y G AI S+   + +   L  +  D Q RFI A F +                  
Sbjct: 72  AERPGYAGTAIYSRLPFVSLTDGLGFELADSQGRFIAAEFDLGLDQTVQICSLYLPSGSS 131

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-E 178
                  K  +++ + +   Q  +  + +I  GDYNI+ +  D  N    +  +     E
Sbjct: 132 GDEAQARKDHFLEEYAKILKQWRDENKSVIVCGDYNIVHKRIDIKNWSGNQKASGCLPHE 191

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
                     +G+ D  R       LYS+W     + +KN G RID+   SP+      +
Sbjct: 192 RAWLDHIYDELGYVDTFREVRKEAELYSWWSNRGQARAKNVGWRIDYHACSPDWKERTVN 251

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263
           A +  +       SDH PVI+   +
Sbjct: 252 AWVYKE----QWFSDHAPVIIDYKL 272


>gi|15604130|ref|NP_220645.1| exodeoxyribonuclease III (xthA1) [Rickettsia prowazekii str. Madrid
           E]
 gi|3860822|emb|CAA14722.1| EXODEOXYRIBONUCLEASE III (xthA1) [Rickettsia prowazekii]
 gi|292571858|gb|ADE29773.1| Exodeoxyribonuclease III [Rickettsia prowazekii Rp22]
          Length = 261

 Score =  155 bits (391), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 77/263 (29%), Positives = 121/263 (46%), Gaps = 7/263 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62
           + V TWN+NS+R RI  L     E+ PDII LQETK  +  FP E ++++ Y H+   GQ
Sbjct: 1   MKVVTWNINSLRLRIDLLRKLAYEHQPDIILLQETKVANSLFPLEVIKNIGYEHVIYSGQ 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           KSYNGVAI+SK+    +      +        I     I+   +          +   + 
Sbjct: 61  KSYNGVAIISKFPLNNVFALELYNGDKRHIAAIVNDLEIHNFYV---PAGGDIPDVEVNF 117

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           K+  K+ +++    + +      + +I  GD NI P  HD ++    +N    T   R  
Sbjct: 118 KFKHKLEYVRLMREWFTANRTKNDKIIIVGDLNIAPHEHDVWSSKQMQNVISHTDIERSL 177

Query: 183 FQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLLHSA 239
             +LQN       +          Y++W Y    W K N+G R+DHI +S      L S 
Sbjct: 178 LIELQNSLGFIDSSRYFISLNKKCYTWWSYRNVDWKKSNRGRRLDHIWVSDNLKYALFSM 237

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
            + ++ R W +PSDH P +V+ +
Sbjct: 238 HLLSEARDWFRPSDHVPYLVTFN 260


>gi|296139981|ref|YP_003647224.1| exodeoxyribonuclease III Xth [Tsukamurella paurometabola DSM 20162]
 gi|296028115|gb|ADG78885.1| exodeoxyribonuclease III Xth [Tsukamurella paurometabola DSM 20162]
          Length = 291

 Score =  154 bits (390), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 68/292 (23%), Positives = 96/292 (32%), Gaps = 32/292 (10%)

Query: 4   VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           +TVAT+NVN IRA R     +W+     DI+ LQE +      P        YH      
Sbjct: 1   MTVATFNVNGIRAARRRGFDSWLAGRGADIVALQELRCP----PDAVGDFAGYHAAIDCG 56

Query: 62  -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ-----TLRIGNLYLPH 115
                NGVAIL++     + +           R                 L +  LYLP 
Sbjct: 57  SIPGRNGVAILTREPAAAVRSWAEHPPRARGLREYAHEGRYIEADLAEAPLTVACLYLPK 116

Query: 116 GNPITS------------------TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII 157
           G                        K     ++ +   R            +  GD N+ 
Sbjct: 117 GGLPAHLQRPGTLRDVPDGGAKYQRKMRFLAAFARELDRNRRAAHARGREFLLLGDLNLA 176

Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA--THDTHHLYSFWDYYADSW 215
             PHD  N    +    F  E R              +      D     S+W +   S+
Sbjct: 177 HLPHDVTNWRPAQKMEGFLPEERAWLDARLGPRTLVDVVRRLHGDRPGPLSWWSWAGASF 236

Query: 216 SKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPR 267
           +KN G RIDH + SP   +   S  +D + R   + SDH PV+V    P   
Sbjct: 237 TKNVGWRIDHHLASPGLAATAVSVVVDKEARADARLSDHAPVVVDYAFPAGP 288


>gi|226322793|ref|ZP_03798311.1| hypothetical protein COPCOM_00565 [Coprococcus comes ATCC 27758]
 gi|225208774|gb|EEG91128.1| hypothetical protein COPCOM_00565 [Coprococcus comes ATCC 27758]
          Length = 231

 Score =  154 bits (390), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 67/242 (27%), Positives = 101/242 (41%), Gaps = 12/242 (4%)

Query: 22  AAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81
             + KE + DI CLQETK ++     + L   + +  +  +K Y+G AI +K +P+ +  
Sbjct: 1   MDFFKEADADIFCLQETKMQEGQLVLD-LPEYHQYWNSAVKKGYSGTAIFTKKEPLSVTY 59

Query: 82  HLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQR 141
            L  ++ D + R I   F                   +            +       ++
Sbjct: 60  GLGIEEHDQEGRVITLEFEDFYFITVYTPNSQSELARLDYRM------TWEDAFLAYLKK 113

Query: 142 LELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT 201
           LE  +P+IF GD N+  +  D  NP     +A FT E R  F  L + GF D  R  +  
Sbjct: 114 LEETKPVIFCGDLNVAHKEIDLKNPKTNRKNAGFTDEERAKFSALLDAGFIDTYRYFYPD 173

Query: 202 -HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
              +YS+W Y   +  KN G RID+   S    S L  A+I T   G    SDH PV + 
Sbjct: 174 KEGIYSWWSYRFKAREKNAGWRIDYFCTSKALESRLEDAKILTNVFG----SDHCPVELD 229

Query: 261 LD 262
             
Sbjct: 230 FK 231


>gi|291222020|ref|XP_002731016.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
          Length = 338

 Score =  154 bits (390), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 67/259 (25%), Positives = 113/259 (43%), Gaps = 13/259 (5%)

Query: 4   VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFET-LQSLNYHIETCG 61
           + + +WNVN +RA   N    ++ + +PDI  +QETK ++   P +      + +     
Sbjct: 86  IKLVSWNVNGVRAWCKNEGHKYVSKEDPDIFTIQETKCQEGEVPDDVKFDGYHSYWSYAE 145

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y G  + SK +PI +   +  +  D + R I A +        I       G  +  
Sbjct: 146 EKGYAGTGLYSKVEPISVTYGIGINKHDKEGRCITAEYEKFYF---ISTYIPNAGKGLKR 202

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
             Y  +     R        L+ ++P+I+ GD N+  Q  D  NP   +  A F+ E R+
Sbjct: 203 LSYRQEWDKDFREYMKK---LDEKKPIIWCGDLNVAHQEIDLTNPKTNKKTAGFSKEERE 259

Query: 182 SFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            F K   +G  D+ R  +      +SFW Y  ++  KN G R+D+ +LS      L  + 
Sbjct: 260 GFTKHLEIGLVDSYRHLNPEKTGEWSFWTYMMNARGKNIGWRLDYFVLSKRLLPCLCDSI 319

Query: 241 IDTKPRGWTKPSDHTPVIV 259
           I    R     SDH P+++
Sbjct: 320 I----RSQVYGSDHAPIVL 334


>gi|312381587|gb|EFR27301.1| hypothetical protein AND_06082 [Anopheles darlingi]
          Length = 517

 Score =  154 bits (389), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 65/237 (27%), Positives = 104/237 (43%), Gaps = 9/237 (3%)

Query: 5   TVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
            +++WNV  +R+ +      +I+   PDI+CLQETK  +   P E      YH     + 
Sbjct: 25  KISSWNVAGLRSWVGKGGLDFIEHEQPDILCLQETKCTEDQLPDEARHIKGYHPYWLCKP 84

Query: 64  SYN-GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
               GVAI S+  PI +   L  ++ D   R + A +        +  +Y+P+      T
Sbjct: 85  GGYAGVAIYSRKMPIHVSYGLGDEEQDQDGRLLTAEYE----KFYLVCVYVPNAGNKLVT 140

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
               K            + L+ ++P+I  GD N+  +  D  NP   + +A FT E R  
Sbjct: 141 L--PKRMRWDEKFHQYLRELDSKKPVILCGDMNVAHEEIDLANPKTNKKNAGFTQEERDG 198

Query: 183 FQKLQNMGFTDAIRATHDTHH-LYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
             KL + GF D  R  +      YSFW Y   + +KN G R+D+ ++S   T  +  
Sbjct: 199 LSKLLSFGFVDTFRQLYPDRKAAYSFWTYMGGARAKNVGWRLDYFIVSQRFTDKVTD 255


>gi|145534702|ref|XP_001453095.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124420795|emb|CAK85698.1| unnamed protein product [Paramecium tetraurelia]
          Length = 348

 Score =  154 bits (389), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 60/264 (22%), Positives = 97/264 (36%), Gaps = 7/264 (2%)

Query: 3   VVTVATWNVNSIRARIH--NLAAWIKENNPDIICLQETKTEDKNFPFETL-QSLNYHIET 59
            V +A+WNVN IRA         ++++   D+ICL E K +   F  E L      H   
Sbjct: 86  TVKIASWNVNGIRAATKREQAVKYLQDTKFDVICLNELKADQAVFDKENLGAQFGKHYFL 145

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
                 N           ++       D+ +     E                       
Sbjct: 146 YLNFCKNKGGYSGVAIASKVKPISVKCDIGISKHDQEGRTLTAEYERFYLVACYVPNAGQ 205

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              + D +        +   + L  ++P I  GD N+     D  NP   +  A FT E 
Sbjct: 206 KLERLDYRTKEWDVDFQNYLEDLRKKKPTILCGDLNVSHHEIDLANPAGNKKTAGFTQEE 265

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R  F      G+ D+ R  H     YS++    +S   NKG R+D+ +++ E+T  +  +
Sbjct: 266 RDQFTNYLQKGWVDSFRHLHPKEVKYSYFSARFNSKQSNKGWRLDYFIINKESTDAIIMS 325

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
            I+T   G    SDH P+   +D+
Sbjct: 326 DINTAVEG----SDHVPIECEVDL 345


>gi|219884049|gb|ACL52399.1| unknown [Zea mays]
          Length = 493

 Score =  154 bits (389), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 66/272 (24%), Positives = 116/272 (42%), Gaps = 23/272 (8%)

Query: 4   VTVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTEDKNFPFETLQS---LNYH 56
           + + +WNVN ++A + +    +    +  + D++CLQETK ++K+   E ++      Y 
Sbjct: 233 LKIMSWNVNGLKALLKSRGFSVQQLAQREDFDVLCLQETKMQEKDI--EVIKDTLLDGYT 290

Query: 57  IETCGQK----SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
                       Y+G AI+S+ +P+ I   L   D D + R +   F        +   Y
Sbjct: 291 NSFWTCSVSKLGYSGTAIISRVKPLSIKYGLGISDHDTEGRVVTVEFD----DFYLLTAY 346

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
           +P+       +   +++     L    + LE  +P+I  GD N   Q  D ++P      
Sbjct: 347 VPNSG-DGLKRLTYRVTEWDPSLGNYMKELEKSKPVILTGDLNCAHQEIDIHDPAGDRRS 405

Query: 173 ACF-TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
           A F   E         + GF D  R  H     YS+W Y  ++   NKG R+D+ ++S  
Sbjct: 406 AGFTNEERESFGTNFLSKGFVDTFRKQHPNVVAYSYWGYRHNARKTNKGWRLDYFLVSES 465

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            T  +H + I          SDH+P+ + L +
Sbjct: 466 ITEKVHDSYILPDI----SASDHSPLGLVLKL 493


>gi|42519716|ref|NP_965646.1| exodeoxyribonuclease A [Lactobacillus johnsonii NCC 533]
 gi|41584005|gb|AAS09612.1| exodeoxyribonuclease A [Lactobacillus johnsonii NCC 533]
          Length = 261

 Score =  154 bits (389), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 63/263 (23%), Positives = 111/263 (42%), Gaps = 13/263 (4%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++   +WNVN +RA + H       + + DI  +Q+T+ E      + L     +     
Sbjct: 7   IMKFMSWNVNGLRAALRHGFVNTFTDLDADIFGIQDTRVEPNEVKID-LPGYYQYWNYAE 65

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y G A+ +K +PI +       ++D + R I   F+       I       G  +  
Sbjct: 66  RKGYAGTAVFTKEKPITVANGFGVPEVDGEGRSITLEFSNFYF---INVQVPFSGEKLQR 122

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
             + +  +   R        L   +P+I  GD ++  +  D   P    +   FT   R+
Sbjct: 123 LDFRELWAQTFRNYVTK---LMQYKPVIIGGDMSVAHERIDLAEPDDNHHRPGFTGIERK 179

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD-SWSKNKGIRIDHIMLSPEATSLLHSAR 240
            F +L N GF D  R  H     Y++W Y    + ++N G R+D+ ++S      L +A+
Sbjct: 180 EFSELLNAGFIDTFRYFHPDEAKYTYWSYRDKEARAENLGWRLDYFLVSNNLEDRLTNAK 239

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263
           I +   G    SDH P+ + +DI
Sbjct: 240 ILSNIMG----SDHCPIELDVDI 258


>gi|306842863|ref|ZP_07475501.1| exodeoxyribonuclease III (xth) [Brucella sp. BO2]
 gi|306286985|gb|EFM58500.1| exodeoxyribonuclease III (xth) [Brucella sp. BO2]
          Length = 252

 Score =  154 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 69/254 (27%), Positives = 112/254 (44%), Gaps = 9/254 (3%)

Query: 18  IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKSYNGVAILSKYQP 76
           +  +  ++++  PD++CLQETK  D  FP +  ++L Y HI   GQK Y+GVA +S+   
Sbjct: 1   MPLVEQFLRDYQPDVLCLQETKCPDDQFPAKGFRALGYEHIAISGQKGYHGVATVSRRPL 60

Query: 77  IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRF-- 134
             +             R + A      + LRI N Y+P G        + K +    F  
Sbjct: 61  GGVEK--VDFCNMGDCRHLSAVVEAGDRKLRIHNFYVPAGGDEPDPAINPKFAHKLAFLE 118

Query: 135 -LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVRQSFQKLQNMGFT 192
            +R      + E   +  GD NI P  +D ++          T  E           G++
Sbjct: 119 EMRAIIADRKDECSSLLVGDLNIAPLENDVWSHKQLLKIVSHTPIETETLEDLRIKGGWS 178

Query: 193 DAIRATHD-THHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
           D +R        +Y++W Y A  W   ++G R+DH+  S +  S +   ++    RGW +
Sbjct: 179 DLMRHLIAADQKIYTWWSYRAKDWDAADRGRRLDHVWGSADLESHIKGLQVLRDARGWDR 238

Query: 251 PSDHTPVIVSLDIP 264
           PSDH PVI + D+ 
Sbjct: 239 PSDHVPVIATFDLD 252


>gi|152994652|ref|YP_001339487.1| exodeoxyribonuclease III Xth [Marinomonas sp. MWYL1]
 gi|150835576|gb|ABR69552.1| exodeoxyribonuclease III Xth [Marinomonas sp. MWYL1]
          Length = 258

 Score =  154 bits (388), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 55/263 (20%), Positives = 104/263 (39%), Gaps = 7/263 (2%)

Query: 4   VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + V + NVN IR A       W+   +PD++CLQ+ + +++           Y+      
Sbjct: 1   MKVISLNVNGIRQAAERGFFEWMVRQDPDVVCLQDIQADERTLNDSVFFPPGYNTYFFDS 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
                 A ++ Y        + G     +  F       +   + IG    PHG+     
Sbjct: 61  MENPEQAGVAIYCKTMPKAIMTGMGFP-ECDFEGRFIQADFDKVSIGAFLTPHGSNHEEA 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
             + K  +++ F     +        IF G  N+   P D  +  + + ++ F  E R+ 
Sbjct: 120 LQEHKYRFMEGFKNHLIKTRRKRREFIFCGTANVARSPIDVSSWFVNQRNSGFLPEERKW 179

Query: 183 FQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             ++ N   + DA R  +     Y++W  Y  +W  ++G R+D+ + +P   +L+    I
Sbjct: 180 INEIFNELEYIDAFRQVNKQDKQYTWWPDYERAWKLDEGGRLDYQITTPGIKNLIQGGTI 239

Query: 242 DTKPRGWTKPSDHTPVIVSLDIP 264
               R     SDH P+I+  +I 
Sbjct: 240 YKGQR----FSDHAPLIMEYNID 258


>gi|256831938|ref|YP_003160665.1| exodeoxyribonuclease III Xth [Jonesia denitrificans DSM 20603]
 gi|256685469|gb|ACV08362.1| exodeoxyribonuclease III Xth [Jonesia denitrificans DSM 20603]
          Length = 287

 Score =  154 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 64/272 (23%), Positives = 111/272 (40%), Gaps = 5/272 (1%)

Query: 2   SVVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           +++T+AT NVN +RA     + AWI    PDII +QE +  D           +   + C
Sbjct: 16  AMLTIATVNVNGLRAAWRKGMPAWIDAAQPDIILMQEVRAPDDIVHGFFSNGWSLVQQAC 75

Query: 61  GQKSYNGVAILSKYQPIEIVTH---LPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
             K   GVAI +++  I           +      R++EA   +             H  
Sbjct: 76  DIKGRAGVAIATRHDIIAARIGLGPQQPEIPVDTGRWVEADIALEHGRTLTVVSAYIHSG 135

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
              + K D+K S++ R     ++    +   + AGD NI    +D  N    +  A F  
Sbjct: 136 TAGTPKMDEKYSYLNRVTTRLAELNTPDSLALVAGDINIAHTNNDIKNWRGNKKSAGFLP 195

Query: 178 EVRQSFQKLQNMGFTDAIRA-THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
           E R    +  + G+ D  R    +    Y++W     ++  + G RID+ + +PE  +  
Sbjct: 196 EERAYLDQWFDAGWHDTHRDLVGEQEGPYTWWSNRGQAFDNDSGWRIDYHLTTPELFTHA 255

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268
              R+D  P   T+ SDH P+++   +    +
Sbjct: 256 SYPRVDRAPSYDTRWSDHAPLVIDYSLTPASR 287


>gi|290562880|gb|ADD38834.1| DNA-apurinic or apyrimidinic site lyase [Lepeophtheirus salmonis]
          Length = 317

 Score =  154 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 71/263 (26%), Positives = 117/263 (44%), Gaps = 17/263 (6%)

Query: 4   VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY---HIE 58
           + + +WNV  +RA I    L+  ++   PDI CLQETK  +   P E  +  +Y      
Sbjct: 61  LKITSWNVAGVRAWIKKGSLSYLLETEKPDIFCLQETKCSETKIPCELKELKDYPHQFWA 120

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
              ++ Y+GVA+ SK +P+++   L   D D + R I A F        +       G  
Sbjct: 121 FAKKEGYSGVALFSKVKPLDVQVGLQSQDHDEEGRIIIAEFE---FFFLLTTYVPNAGRK 177

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
           + +         + R       + +    +I +GD N+     D  NP   + +A FT E
Sbjct: 178 LVTLDKRLDWDLLLRKKMKELNKKKP---VIASGDLNVAHTEIDLANPKTNQKNAGFTPE 234

Query: 179 VRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPE-ATSLL 236
            R  F  L ++GF D  R  +      Y+FW Y  ++ +KN G R+D+ ++S     S +
Sbjct: 235 ERAGFDDLLSLGFVDTYRKLNPEKTGAYTFWTYMMNARAKNVGWRLDYFLISDRWFESNV 294

Query: 237 HSARIDTKPRGWTKPSDHTPVIV 259
             + I +K  G    SDH P+ +
Sbjct: 295 CDSVIRSKVLG----SDHCPISL 313


>gi|293189928|ref|ZP_06608608.1| exodeoxyribonuclease III [Actinomyces odontolyticus F0309]
 gi|292821147|gb|EFF80094.1| exodeoxyribonuclease III [Actinomyces odontolyticus F0309]
          Length = 275

 Score =  154 bits (388), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 46/275 (16%), Positives = 90/275 (32%), Gaps = 15/275 (5%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
            +TV T N+N IRA        W++ ++ D++ +QE +  ++    E +      +    
Sbjct: 2   TLTVTTVNLNGIRAAHKRGFLDWLEASDTDVLLMQEVRAPEE-ISREIMGEAWESVWVPC 60

Query: 62  QKSYNGVAILSKYQPIEIVTHLP--------GDDLDVQARFIEATFTINTQTLRIGNLYL 113
           +        ++  +   ++   P         D    +              +R+ + Y 
Sbjct: 61  RIKGRAGVGVAVRRGRAVLEGEPRLILDEAETDVDSGRWLEAVVRPEGGDTPVRVVSAYF 120

Query: 114 PHGNPITSTK---YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170
             G   T  +            R     ++        +  GD+N++    D  N     
Sbjct: 121 HSGEKDTPKQEAKMAHLPRIGARMAELIAEEAGGGISSLVCGDFNVVRSEADIKNWKPNH 180

Query: 171 ND--ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
           N        E+    + ++            D    YS+W +   ++  N G RID+   
Sbjct: 181 NKRAGVLDEEIAFLNRWVEEGWRDTVRDLAGDVQGPYSWWSWRGQAFVNNAGWRIDYQYA 240

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +P       S  I        + SDH PV V+ +I
Sbjct: 241 TPALGERARSFEIGRADEYAERFSDHAPVSVTYEI 275


>gi|289705979|ref|ZP_06502353.1| putative exodeoxyribonuclease III [Micrococcus luteus SK58]
 gi|289557316|gb|EFD50633.1| putative exodeoxyribonuclease III [Micrococcus luteus SK58]
          Length = 308

 Score =  153 bits (387), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 62/270 (22%), Positives = 96/270 (35%), Gaps = 12/270 (4%)

Query: 4   VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDK---NFPFETLQSLNYHIE- 58
           V VAT NVN IRA     +  W      D++ LQE +           E +      +  
Sbjct: 37  VRVATVNVNGIRASHRKGMREWFAGRGVDVLTLQEVRAPADVTAQLVREIVGEDWDEVHL 96

Query: 59  ---TCGQKSYNGVAILSKYQPIEIVTH--LPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
                  K   GVAI S++   E+ T         D   R+IEA   +   +        
Sbjct: 97  ADAVAAAKGRAGVAIASRFPLGEVRTGIADADGYFDDAGRWIEADLRLPDGSPLTVVSAY 156

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
            H   + + K  DK  ++   +R  S+    E   +  GD N+     D  N       A
Sbjct: 157 VHSGEVDTPKQVDKYRFLDEMVRRLSELAAGEGHALVTGDLNVGHTELDIKNWKGNVKKA 216

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
            F  E R  F +         +           Y++W     ++  + G RID+ M +  
Sbjct: 217 GFLPEERAYFDRFFGELGFTDVHRALAGPVPGPYTWWSMRGKAFDNDAGWRIDYHMATAG 276

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
                 +A +D  P   T+ SDH P++V  
Sbjct: 277 LAERATTAVVDRAPSWGTRFSDHAPLVVDY 306


>gi|329667966|gb|AEB93914.1| exodeoxyribonuclease A [Lactobacillus johnsonii DPC 6026]
          Length = 260

 Score =  153 bits (387), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 64/263 (24%), Positives = 111/263 (42%), Gaps = 13/263 (4%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++   +WNVN +RA + H       + + DI  +Q+T+ E      + L     +     
Sbjct: 6   IMKFMSWNVNGLRAALRHGFVNTFTDLDADIFGIQDTRVEPNEVKID-LPGYYQYWNYAE 64

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y G A+ +K +PI +       ++D + R I   F+       I       G  +  
Sbjct: 65  RKGYAGTAVFTKEKPITVANGFGVPEVDGEGRSITLEFSNFYF---INVQVPFSGEKLQR 121

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
             + +  + I R        L   +P+I  GD ++  +  D   P    +   FT   R+
Sbjct: 122 LDFRELWAQIFRNYVTK---LMQYKPVIIGGDMSVAHERIDLAEPDDNHHRPGFTGIERK 178

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD-SWSKNKGIRIDHIMLSPEATSLLHSAR 240
            F +L N GF D  R  H     Y++W Y    + ++N G R+D+ ++S      L +A+
Sbjct: 179 EFSELLNAGFIDTFRYFHPDEAKYTYWSYRDKEARAENLGWRLDYFLVSNNLEDKLTNAK 238

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263
           I     G    SDH P+ + +DI
Sbjct: 239 ILNNIMG----SDHCPIELDVDI 257


>gi|156543084|ref|XP_001605156.1| PREDICTED: similar to ENSANGP00000020924 [Nasonia vitripennis]
          Length = 391

 Score =  153 bits (387), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 69/258 (26%), Positives = 107/258 (41%), Gaps = 14/258 (5%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFET-LQSLNYHIETCG 61
           + + TWNV+ IRA +  N   +++  + DII LQETK E K  P E  L+    +     
Sbjct: 140 IKICTWNVSGIRAVLKKNGMTYLEREDADIIALQETKCETKKIPDEVKLKGYTRYFLDSK 199

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +  Y G+A+ SK +PI+I   L  +  D                + + N           
Sbjct: 200 KAGYCGMALYSKKEPIDISMGLDEEFDDEGRLITAEYEHFYLVNVYVPNAGNKLVTLPKR 259

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
                         +   Q L+ ++P+I  GD N+  Q  D  NP     +A FT E R 
Sbjct: 260 L-------KWNEAFKKHIQDLDKKKPVIICGDMNVAHQEIDLKNPKTNTKNAGFTKEERD 312

Query: 182 SFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
                   GF D  R  +      Y+FW Y+ ++ SKN G R+D+ ++S +  + +    
Sbjct: 313 GMTDFLQAGFVDTFRLLYPDKTDAYTFWAYFNNARSKNIGWRLDYYIVSEKIKNKVCDVV 372

Query: 241 IDTKPRGWTKPSDHTPVI 258
                R     SDH PV+
Sbjct: 373 ----NRDQVFGSDHCPVV 386


>gi|154507728|ref|ZP_02043370.1| hypothetical protein ACTODO_00210 [Actinomyces odontolyticus ATCC
           17982]
 gi|153797362|gb|EDN79782.1| hypothetical protein ACTODO_00210 [Actinomyces odontolyticus ATCC
           17982]
          Length = 275

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 46/275 (16%), Positives = 90/275 (32%), Gaps = 15/275 (5%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
            +TV T N+N IRA        W++ ++ D++ +QE +  ++    E +      +    
Sbjct: 2   TLTVTTVNLNGIRAAHKRGFLDWLEASDTDVLLMQEVRAPEE-ISREIMGEAWESVWVPC 60

Query: 62  QKSYNGVAILSKYQPIEIVTHLP--------GDDLDVQARFIEATFTINTQTLRIGNLYL 113
           +        ++  +   ++   P         D    +              +R+ + Y 
Sbjct: 61  RIKGRAGIGVAVRRGRAVLEGEPRLILDEAETDVDSGRWLEAVVRPEGGDTPVRVVSAYF 120

Query: 114 PHGNPITSTK---YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170
             G   T  +            R     ++        +  GD+N++    D  N     
Sbjct: 121 HSGEKDTPKQEAKMAHLPRIGARMAELIAEEAAGGISSLVCGDFNVVRSEADIKNWKPNH 180

Query: 171 ND--ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
           N        E+    + ++            D    YS+W +   ++  N G RID+   
Sbjct: 181 NKRAGVLDEEIAFLNRWVEEGWRDTVRDLAGDVQGPYSWWSWRGQAFVNNAGWRIDYQYA 240

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +P       S  I        + SDH PV V+ +I
Sbjct: 241 TPALGERARSFEIGRADEYAERFSDHAPVSVTYEI 275


>gi|281414526|ref|ZP_06246268.1| exodeoxyribonuclease III [Micrococcus luteus NCTC 2665]
          Length = 308

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 62/270 (22%), Positives = 97/270 (35%), Gaps = 12/270 (4%)

Query: 4   VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDK---NFPFETLQSLNYHIE- 58
           V VAT NVN IRA     +  W      D++ LQE +           E +      +  
Sbjct: 37  VRVATVNVNGIRASHRKGMREWFAGRGVDVLTLQEVRAPADVTAQLVSEIVGEDWDEVHL 96

Query: 59  ---TCGQKSYNGVAILSKYQPIEIVTH--LPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
                  K   GVAI S++   E+ T         D   R+IEA   +   +        
Sbjct: 97  ADAVAAAKGRAGVAIASRFPLGEVRTGIADADGYFDDAGRWIEADLRLPDGSPLTVVSAY 156

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
            H   + + K  DK  ++   +R  S+    E   +  GD N+     D  N       A
Sbjct: 157 VHSGEVDTPKQVDKYRFLDEMVRRLSELAAGEGHALVTGDLNVGHTELDIKNWKGNVKKA 216

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
            F  E R  F +         +           Y++W     ++  + G RID+ M + +
Sbjct: 217 GFLPEERAYFDRFFGELGFTDVHRALAGPVPGPYTWWSMRGKAFDNDAGWRIDYHMATAD 276

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
                 +A +D  P   T+ SDH P++V  
Sbjct: 277 LAERATTAVVDRAPSWGTRFSDHAPLVVDY 306


>gi|239917012|ref|YP_002956570.1| exodeoxyribonuclease III [Micrococcus luteus NCTC 2665]
 gi|239838219|gb|ACS30016.1| exodeoxyribonuclease III [Micrococcus luteus NCTC 2665]
          Length = 308

 Score =  153 bits (386), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 62/270 (22%), Positives = 97/270 (35%), Gaps = 12/270 (4%)

Query: 4   VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDK---NFPFETLQSLNYHIE- 58
           V VAT NVN IRA     +  W      D++ LQE +           E +      +  
Sbjct: 37  VRVATVNVNGIRASHRKGMREWFAGRGVDVLTLQEVRAPADVTAQLVSEIVGEDWDEVHL 96

Query: 59  ---TCGQKSYNGVAILSKYQPIEIVTH--LPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
                  K   GVAI S++   E+ T         D   R+IEA   +   +        
Sbjct: 97  ADAVAAAKGRAGVAIASRFPLGEVRTGIADADGYFDDAGRWIEADLRLPDGSPLTVVSAY 156

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
            H   + + K  DK  ++   +R  S+    E   +  GD N+     D  N       A
Sbjct: 157 VHSGEVDTPKQVDKYRFLDEMVRRLSELAAGEGHALVTGDLNVGHTELDIKNWKGNVKKA 216

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
            F  E R  F +         +           Y++W     ++  + G RID+ M + +
Sbjct: 217 GFLPEERAYFDRFFGELGFTDVHRALAGPVPGPYTWWSMRGKAFDNDAGWRIDYHMATAD 276

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
                 +A +D  P   T+ SDH P++V  
Sbjct: 277 LAERATTAVVDRAPSWGTRFSDHAPLVVDY 306


>gi|87120863|ref|ZP_01076755.1| exodeoxyribonuclease III [Marinomonas sp. MED121]
 gi|86163701|gb|EAQ64974.1| exodeoxyribonuclease III [Marinomonas sp. MED121]
          Length = 258

 Score =  153 bits (386), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 55/263 (20%), Positives = 105/263 (39%), Gaps = 7/263 (2%)

Query: 4   VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + V + NVN IR A       W+ E + D++CLQ+ + E+ +          Y+      
Sbjct: 1   MKVISLNVNGIRQAADRGFFEWMIEQDADVVCLQDIQAEETSLNDNVFFPPGYNSYFFDS 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
            +   VA ++ Y        + G        F       +   + I +   PHG+     
Sbjct: 61  LTNPDVAGVAIYSKKMPKAIMTGIGFS-DGDFEGRFIQADFDKVSIASFLTPHGSNHEQE 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
             D K ++++ F     +        IF G  N+   P D  +  + + ++ F  E RQ 
Sbjct: 120 LQDQKYAFMEGFKNHLIKTRRKRREFIFCGTANVARSPIDVSSWFVNQRNSGFLPEERQW 179

Query: 183 FQKLQN-MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             ++ N   + DA R  +     Y++W  Y  +W  ++G R+D+ + +P    ++ +  +
Sbjct: 180 INEIFNEHEYIDAFRQINKQDKQYTWWPDYERAWKLDEGGRLDYQIATPGLKQVIRAGSV 239

Query: 242 DTKPRGWTKPSDHTPVIVSLDIP 264
               R      DH P+I+  D+ 
Sbjct: 240 YKDQRFA----DHAPLIMEYDLD 258


>gi|78186003|ref|YP_374046.1| AP endonuclease [Chlorobium luteolum DSM 273]
 gi|78165905|gb|ABB23003.1| AP endonuclease, family 1 [Chlorobium luteolum DSM 273]
          Length = 267

 Score =  153 bits (385), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 61/275 (22%), Positives = 109/275 (39%), Gaps = 9/275 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + VA+WNVN IRAR   L +W+++++PD++ LQE K   +  P   +    Y        
Sbjct: 1   MIVASWNVNGIRAREGALESWVRQSSPDVLILQEVKASVEEIPLSIMSLDGYRSFWNDSS 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
              G +  +     E                   T  ++T  L I   Y+P G+      
Sbjct: 61  IRKGYSG-TGILMKETPALEGATFEIPPFDIENRTVVLHTGELSIIGTYVPRGDSAQHYV 119

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
              K+ +++    +  + L     ++  GD N+  +  D +             E R + 
Sbjct: 120 L--KLGYLEAMHEYVRELLACGRQILVTGDMNVAHRQVDLHRSENRPGATGIRPEERSAI 177

Query: 184 QKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
            +L  +G +D +R  +     L+++W Y+  +  +N G RID   LS      +  A +D
Sbjct: 178 DRLIALGLSDVMRELNPERDDLFTWWPYWRMARERNIGWRIDCFYLSGYRKDRILRAAVD 237

Query: 243 TKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQN 277
                  K SDH P+I+   +PE    +   +   
Sbjct: 238 M----PEKSSDHAPIILEF-VPESGLHEDTRSFSR 267


>gi|255578467|ref|XP_002530098.1| ap endonuclease, putative [Ricinus communis]
 gi|223530409|gb|EEF32297.1| ap endonuclease, putative [Ricinus communis]
          Length = 486

 Score =  153 bits (385), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 75/269 (27%), Positives = 117/269 (43%), Gaps = 28/269 (10%)

Query: 4   VTVATWNVNSIRARIH--NL--AAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           V + +WNVN +RA +           +  N D++C QETK + K           Y    
Sbjct: 237 VKLMSWNVNGLRALLKLEGFSAVELAQRENFDVLCFQETKLQAK----------GYENSF 286

Query: 60  CGQKS----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
                    Y+G AI+S+ +P+ +   L   D D + R + A F     +  + N Y+P+
Sbjct: 287 WTCSHSKLGYSGTAIVSRVKPLSVSYGLGIADHDSEGRLVTAEFD----SFYLLNAYVPN 342

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
                  +   ++S     L    + LE  +P+I  GD N   Q  D YNP     +A F
Sbjct: 343 SG-DGLKRLSYRVSQWDLSLSNYMKELEKSKPVILNGDLNCAHQEIDIYNPAGNRRNAGF 401

Query: 176 TLEVRQSFQKLQ-NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
           T E RQSF+    + GF D+ R  H     Y++W Y       NKG R+D+ ++S   + 
Sbjct: 402 TDEERQSFETNFLSRGFVDSFRKQHPDVVGYTYWGYRHGGRKTNKGWRLDYFLVSESISD 461

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            +H + I     G    SDH P+ + L +
Sbjct: 462 QVHDSYIVPDVTG----SDHCPIGLVLKV 486


>gi|86156859|ref|YP_463644.1| exodeoxyribonuclease III [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85773370|gb|ABC80207.1| exodeoxyribonuclease III [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 262

 Score =  152 bits (384), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 63/266 (23%), Positives = 103/266 (38%), Gaps = 15/266 (5%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + TWNVN IRAR   +  +I    PD++CLQE K      P    +   Y     G+ 
Sbjct: 1   MKIGTWNVNGIRAREAQVGEFIAREGPDVVCLQEIKAPPSKVPPSLCELEGYWCLWHGET 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +Y+GVA+L +               D++ R            + + ++Y+P+G    + K
Sbjct: 61  AYSGVALLVRKAIAPERPAFVHPPFDLETRVATCELGG----VTVASIYVPNGGKDLAAK 116

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
                       RFA+       PL+  GD N+     D +             E R  F
Sbjct: 117 LRFLE----AMERFAADAQASGRPLVLCGDLNVARTDMDVHPKERKAGAIGQLPEERALF 172

Query: 184 QKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           +++   G  D  RA       L+++W  + +   +N G RID+++ S    +     R+ 
Sbjct: 173 ERILAHGLVDVGRALDPANEGLFTWWAPWRNLRQRNIGWRIDYVLASAPLAASATRCRVL 232

Query: 243 TKPRGWTKPSDHTPVIVSLDIPEPRK 268
                    SDH PV+     P P  
Sbjct: 233 AD----FGTSDHAPVVAEF--PAPSP 252


>gi|193211783|ref|YP_001997736.1| exodeoxyribonuclease III [Chlorobaculum parvum NCIB 8327]
 gi|193085260|gb|ACF10536.1| exodeoxyribonuclease III [Chlorobaculum parvum NCIB 8327]
          Length = 253

 Score =  152 bits (383), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 60/259 (23%), Positives = 101/259 (38%), Gaps = 9/259 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + TWN+N IRAR   LAAW+    PD + L+E K  ++  P        Y     G  
Sbjct: 1   MNIYTWNINGIRARQEALAAWLDSRKPDFVVLEEVKAREEEIPETITDFAGYRKFWNGSS 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
              G + +      E +  +  +           T  ++     +   Y+P GN   +  
Sbjct: 61  FKKGYSGVGLLVREESLGDVSCEVPPF--DVENRTLVLHAPQFTLIGTYVPRGN--GAEH 116

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ ++     + +  +   + +I AGD N+     D +             E R + 
Sbjct: 117 YAVKLRYLADLKEYIASLIAEGQEVILAGDMNVALTEIDVHRSQNKPGATGLRPEERSAI 176

Query: 184 QKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           +    +G  D +R  +     L+++W  +  +  +N G RID I LSP     +    +D
Sbjct: 177 EAHLELGLHDIVRELNPDKKDLFTWWPNWKFARERNLGWRIDCIYLSPALAGKVSGVSVD 236

Query: 243 TKPRGWTKPSDHTPVIVSL 261
                  K SDH PV V L
Sbjct: 237 LD----EKSSDHAPVSVEL 251


>gi|162147600|ref|YP_001602061.1| putative exodeoxyribonuclease III protein [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209542233|ref|YP_002274462.1| exodeoxyribonuclease III Xth [Gluconacetobacter diazotrophicus PAl
           5]
 gi|161786177|emb|CAP55759.1| putative exodeoxyribonuclease III protein [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209529910|gb|ACI49847.1| exodeoxyribonuclease III Xth [Gluconacetobacter diazotrophicus PAl
           5]
          Length = 270

 Score =  152 bits (383), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 81/263 (30%), Positives = 118/263 (44%), Gaps = 6/263 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62
           + + TWN+NS+R R+  LA    E  PDIICLQETK  D  FP + ++ L Y HI+  G 
Sbjct: 8   MRIVTWNINSLRLRLPLLARLGAELRPDIICLQETKVPDDLFPADAIRDLGYVHIQHRGM 67

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           KSYNGVAILS+     +    P        R I A+F +  + + + N Y+P G  I   
Sbjct: 68  KSYNGVAILSRVPLTPLD-DTPDWCARSDCRHIAASFPMGGRPVELHNFYVPAGGDIPDP 126

Query: 123 KYDDKISWIKRFLRFASQRL--ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF-TLEV 179
             + K +    F+  A+           I  GD NI P   D ++     N       EV
Sbjct: 127 DANPKFAHKLAFVDEATSWFTGRTSHRTILVGDLNIAPLEQDVWSHKQLLNVVSHTPPEV 186

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLLHS 238
            +                      LY++W Y    W + N+G R+DH+ ++P+ T+ L  
Sbjct: 187 TRLMAWQACGFVDAMRHFVPPDEKLYTWWSYRNRDWKASNRGRRLDHVWITPDLTAALKD 246

Query: 239 ARIDTKPRGWTKPSDHTPVIVSL 261
             +  + R W   SDH PV +  
Sbjct: 247 MTVLREARDWPTTSDHVPVAMDF 269


>gi|168036056|ref|XP_001770524.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162678232|gb|EDQ64693.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 363

 Score =  152 bits (383), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 73/278 (26%), Positives = 114/278 (41%), Gaps = 25/278 (8%)

Query: 2   SVVTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKN---FPFE 48
            VV + +WNVN +RA +            +A      + D++CLQETK ++K+       
Sbjct: 95  KVVKLLSWNVNGLRALLKEKGAEHEQGSMIARLAAREDFDVLCLQETKLQEKDVADIRKS 154

Query: 49  TLQSLNYHIETCGQKS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
            L S    +  C      Y+G AI+S+ +PI +   L   + D + R I   F      +
Sbjct: 155 LLASHEVSLWGCSTSKLGYSGTAIISRIKPISVQYGLGIPNHDQEGRLITCEFDTFYFVV 214

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
                               +       L    + LE ++P+I  GD N   +  D  +P
Sbjct: 215 SYVPNSGAKLER-----LAYRTQEWDVALSSHLRELEKKKPVILTGDLNCAHEDIDINDP 269

Query: 167 IIWENDACFTLEVRQSFQKLQ-NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225
                 A FT E R+SF+    + GF D  R  H     Y++W Y   S  KNKG R+D+
Sbjct: 270 AGNRKSAGFTDEERESFKTNFLDHGFVDTFRKQHPNAVAYTYWGYRTASRPKNKGWRLDY 329

Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            ++S   +  +H +       G    SDH P+ + L I
Sbjct: 330 FLVSGSLSENVHDSYTIPDVGG----SDHCPIALILKI 363


>gi|312067871|ref|XP_003136947.1| exodeoxyribonuclease III family protein [Loa loa]
 gi|307767891|gb|EFO27125.1| exodeoxyribonuclease III family protein [Loa loa]
          Length = 306

 Score =  152 bits (383), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 63/263 (23%), Positives = 111/263 (42%), Gaps = 10/263 (3%)

Query: 4   VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNV  +RA I     + + + NPDI+ LQETK  +   P E        + T  +
Sbjct: 51  IKIISWNVAGLRAWIKKDGHSILVKENPDIVALQETKCVE--VPNELQNGYYSFLNTSEK 108

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
             + GV +L+K +PI++                +    I               +     
Sbjct: 109 SGHGGVLLLTKEEPIKVTYTFDDKSKSGLDGNGKGRIIIAEYENYYLINAYVPNSGRGLV 168

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND-ACFTLEVRQ 181
             D K  +         ++L+L +P+++ GD N+  Q  D  NP    N  A FT + R 
Sbjct: 169 NLD-KRKFWDDCYFSFIKKLDLNKPIVYVGDLNVAHQEIDLANPKTNYNKTAGFTDQERN 227

Query: 182 SFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            F +L + GF D  R  +     +Y+FW    ++  KN G R+D+ ++S    + +    
Sbjct: 228 DFTRLLDAGFVDVFRRLNPEKEGVYTFWSNMRNAREKNVGWRLDYFVVSERIMNKVKECD 287

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263
           I        K SDH P+ +++++
Sbjct: 288 ILCSV----KGSDHCPLSLTIEL 306


>gi|171742567|ref|ZP_02918374.1| hypothetical protein BIFDEN_01680 [Bifidobacterium dentium ATCC
           27678]
 gi|306822478|ref|ZP_07455856.1| exodeoxyribonuclease III [Bifidobacterium dentium ATCC 27679]
 gi|309801420|ref|ZP_07695547.1| putative exodeoxyribonuclease III [Bifidobacterium dentium
           JCVIHMP022]
 gi|171278181|gb|EDT45842.1| hypothetical protein BIFDEN_01680 [Bifidobacterium dentium ATCC
           27678]
 gi|304554023|gb|EFM41932.1| exodeoxyribonuclease III [Bifidobacterium dentium ATCC 27679]
 gi|308221935|gb|EFO78220.1| putative exodeoxyribonuclease III [Bifidobacterium dentium
           JCVIHMP022]
          Length = 286

 Score =  152 bits (383), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 68/286 (23%), Positives = 100/286 (34%), Gaps = 26/286 (9%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI---- 57
            +++ T NVN IRA     +  W   N PDI C+QE +               +      
Sbjct: 2   TISITTSNVNGIRAAKRKGIEIWAGRNTPDIWCMQEVRAPQHEIDP-IFDEFGFEYSTAG 60

Query: 58  ------------ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR--FIEATFTINT 103
                       E C  K   GV +LS    I+    LPG D DV +         T   
Sbjct: 61  KIADQSELDRLNEVCRIKGRAGVGLLSALPVIDKRYGLPGLDDDVDSGRWIEADVKTPQG 120

Query: 104 QTLRIGNLYLPHGNPITS----TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159
             + +  +Y+  GN         KY    + ++R  +   +        +  GD+NI   
Sbjct: 121 YIVTVVCVYVHAGNTDDPAKMEQKYRFLDTMLERMGQLRDEAAHGGRQSVLCGDFNIAHT 180

Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSWSK 217
           P D  N    E  A F  E R    K         +      D    Y++W     ++  
Sbjct: 181 PLDIKNAKANETHAGFLPEERAYVDKWLGELEFVDVMRNLAGDIQGPYTWWSQRGRAFDN 240

Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           N G RID+   +PE         ID  P    + SDH P+ ++ DI
Sbjct: 241 NVGWRIDYQFATPELAESACGFVIDKAPTYDKRWSDHAPLTITYDI 286


>gi|119026076|ref|YP_909921.1| exodeoxyribonuclease [Bifidobacterium adolescentis ATCC 15703]
 gi|154488848|ref|ZP_02029697.1| hypothetical protein BIFADO_02156 [Bifidobacterium adolescentis
           L2-32]
 gi|118765660|dbj|BAF39839.1| possible exodeoxyribonuclease [Bifidobacterium adolescentis ATCC
           15703]
 gi|154082985|gb|EDN82030.1| hypothetical protein BIFADO_02156 [Bifidobacterium adolescentis
           L2-32]
          Length = 286

 Score =  151 bits (382), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 62/286 (21%), Positives = 94/286 (32%), Gaps = 26/286 (9%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI---- 57
            +T+ T NVN IRA     +  W  +N PD+ C+QE +               +      
Sbjct: 2   TITITTSNVNGIRAAKRKGIEQWAAKNTPDVWCMQEVRAPQNEIDP-IFDEFGFEYATAG 60

Query: 58  ------------ETCGQKSYNGVAILSKYQPIEIVTHLPG------DDLDVQARFIEATF 99
                       E C  K   GV +LS    I+    LPG          ++A       
Sbjct: 61  RIADQSGLDRMNEICRIKGRAGVGLLSALPVIDKRYGLPGLAEDVDSGRWIEADVKTPQG 120

Query: 100 TINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159
              T      +            KY    + + R  +   +     +  +  GD+NI   
Sbjct: 121 YTVTVVCVYVHAGNTDDPEKMKQKYRFLDTMLVRMGQLRDEAAHGGKQAVLCGDFNIAHT 180

Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA--THDTHHLYSFWDYYADSWSK 217
           P D  N    E  A F  E R    K         +      D    Y++W     ++  
Sbjct: 181 PLDIKNAKANEKHAGFLPEERAYVDKWLGELEFVDVMRSLCGDIQGPYTWWSQRGRAFDN 240

Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           N G RID+   +PE         ID  P    + SDH P+ ++ D+
Sbjct: 241 NVGWRIDYQFATPELAETARGFVIDKAPTYDLRWSDHAPLSITYDV 286


>gi|293115606|ref|ZP_05792271.2| exodeoxyribonuclease III [Butyrivibrio crossotus DSM 2876]
 gi|292809044|gb|EFF68249.1| exodeoxyribonuclease III [Butyrivibrio crossotus DSM 2876]
          Length = 237

 Score =  151 bits (382), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 64/246 (26%), Positives = 96/246 (39%), Gaps = 12/246 (4%)

Query: 19  HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIE 78
                +    + DI CLQE K  +    +      +Y      +K Y+G A+ SK +P+ 
Sbjct: 3   KGFMDFFDSVDADIFCLQEIKLSEGQIEWNKENYYSY-WNYAEKKGYSGTAVFSKEKPLS 61

Query: 79  IVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFA 138
           +   +  D+ D + R I   F                   +            +   R  
Sbjct: 62  VKYGIGIDEHDHEGRVITLEFENFYMVTVYTPNSQRELTRLEYRM------KWEDDFRNF 115

Query: 139 SQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT 198
              L   +P++  GD N+  +  D  NP     +A FT E RQ   +L + GF D  R  
Sbjct: 116 LNDLRKTKPVVVTGDMNVAHKEIDLKNPKTNRKNAGFTDEERQKMTELLDSGFIDTFRYF 175

Query: 199 HDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257
           +      YS+W Y   S  KN G RID+ + S E    L SA I  K  G    SDH P+
Sbjct: 176 YPDVEQKYSWWSYMFKSREKNAGWRIDYFLASKELEDRLISAEIHDKVLG----SDHCPI 231

Query: 258 IVSLDI 263
            + +D+
Sbjct: 232 ELVIDL 237


>gi|15805383|ref|NP_294077.1| exodeoxyribonuclease III [Deinococcus radiodurans R1]
 gi|6458033|gb|AAF09936.1|AE001896_1 exodeoxyribonuclease III [Deinococcus radiodurans R1]
          Length = 283

 Score =  151 bits (382), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 70/262 (26%), Positives = 118/262 (45%), Gaps = 18/262 (6%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + V T+NVN +R+ +   LA W++ N PD++ LQE + E      + L   +       +
Sbjct: 35  LKVTTFNVNGLRSALRKGLADWVESNQPDVLLLQEVRAEPM---PDALPGYHSAWFPAQK 91

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
             Y+GVAILS+    ++   +P D++D + R + A        +R  ++YLP G+     
Sbjct: 92  AGYSGVAILSRLPLKDVRLGMPHDEMDAEGRVVSAVVAG----VRFVSVYLPSGS-SGEA 146

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +   K   +  +  + S+ L   EP++  GDYNI  +  D  N    + ++ F    R  
Sbjct: 147 RQGFKDRVLADYQAWVSELLAAGEPVVIGGDYNIAHREIDLKNWRSNQKNSGFLPHERTW 206

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
                  G  D  R        Y++W   A++++ N G RID+ +LS      +   R D
Sbjct: 207 MTAHLAAGLVDCHRDCLGEEAEYTWWSNRANAYANNVGWRIDY-LLSAGV--RVSGVRSD 263

Query: 243 TKPRGWTKPSDHTPV--IVSLD 262
              R     SDH P+   V L+
Sbjct: 264 RSVR----LSDHAPLTGWVELE 281


>gi|212715599|ref|ZP_03323727.1| hypothetical protein BIFCAT_00498 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660966|gb|EEB21541.1| hypothetical protein BIFCAT_00498 [Bifidobacterium catenulatum DSM
           16992]
          Length = 286

 Score =  151 bits (381), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 67/286 (23%), Positives = 100/286 (34%), Gaps = 26/286 (9%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI---- 57
            +T+ T NVN IRA     +  W  +N PD+ C+QE +               +      
Sbjct: 2   TITITTSNVNGIRAAKRKGIEQWAAKNTPDVWCMQEVRAPQNEIDP-IFDEFGFEYATAG 60

Query: 58  ------------ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR--FIEATFTINT 103
                       E C  K   GV +LS    +E    LPG + DV +         T   
Sbjct: 61  RVDDQSELNRMNEICRIKGRAGVGLLSTLPVVEKRYGLPGLEEDVDSGRWIEADVQTPQG 120

Query: 104 QTLRIGNLYLPHGNPITS----TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159
             + +  +Y+  GN         KY    + + R  +   +     +  +  GD+NI   
Sbjct: 121 YVITVTCVYVHAGNTDDPEKMKQKYRFLDTMLARMEQLRDEAAHGGKQAVLCGDFNIAHT 180

Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSWSK 217
           P D  N    E  A F  E R    K         +      D    Y++W     ++  
Sbjct: 181 PLDIKNAKANETHAGFLPEERAYVDKWLGELEFVDVMRDLAGDIQGPYTWWSQRGRAFDN 240

Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           N G RID+   +PE         ID  P    + SDH P+ +  DI
Sbjct: 241 NVGWRIDYQFATPELAETACGFVIDKAPTYDLRWSDHAPLSIMYDI 286


>gi|170665740|gb|ACB29409.1| apurinic endonuclease-redox protein [Arabidopsis thaliana]
          Length = 538

 Score =  151 bits (381), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 73/272 (26%), Positives = 113/272 (41%), Gaps = 21/272 (7%)

Query: 4   VTVATWNVNSIRARIH----NLAAWIKENNPDIICLQETKTEDKNFPFETLQS---LNYH 56
           V V TWNVN +R  +     +     +  N DI+CLQETK + K+   E ++      Y 
Sbjct: 276 VKVMTWNVNGLRGLLKFESFSALQLAQRENFDILCLQETKLQVKDV--EEIKKTLIDGYD 333

Query: 57  IETCGQK----SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
                       Y+G AI+S+ +P+ +         D        T   ++  L I    
Sbjct: 334 HSFWSCSVSKLGYSGTAIISRIKPLSVRYGTGLSGSDHDTEGRIVTAEFDSFYL-INTYV 392

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
              G+     +   +I    R L    + LE  +P++  GD N   +  D +NP   +  
Sbjct: 393 PNSGD--GLKRLSYRIEEWDRTLSNHIKELEKSKPVVLTGDLNCAHEEIDIFNPAGNKRS 450

Query: 173 ACFTLEVRQSFQKLQ-NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
           A FT E RQSF     + GF D  R  H     Y++W Y       NKG R+D+ ++S  
Sbjct: 451 AGFTEEERQSFGANFLDKGFVDTFRKQHPGVVGYTYWGYRHGGRKTNKGWRLDYFLVSQS 510

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             + +H + I     G    SDH P+ + L +
Sbjct: 511 IAANVHDSYILPDING----SDHCPIGLILKL 538


>gi|146283435|ref|YP_001173588.1| exodeoxyribonuclease III [Pseudomonas stutzeri A1501]
 gi|145571640|gb|ABP80746.1| exodeoxyribonuclease III [Pseudomonas stutzeri A1501]
          Length = 232

 Score =  151 bits (381), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 95/230 (41%), Positives = 137/230 (59%), Gaps = 5/230 (2%)

Query: 33  ICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKY-QPIEIVTHLPGDDLDVQ 91
           +CLQE K +D +FP + ++   Y     GQKS+NGVAIL++  +P+EI   LPGD  D  
Sbjct: 2   VCLQELKAQDADFPIDDIRGAGYGAIWHGQKSWNGVAILARDSEPLEIRRGLPGDPDDSH 61

Query: 92  ARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFA 151
           +R++EA        + + +LYLP+GNP    K+D K++W +R +  A+  L    P++ A
Sbjct: 62  SRYLEAAV----HGVIVASLYLPNGNPQPGPKFDYKLAWFERLIEHAAGLLASGHPVVLA 117

Query: 152 GDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYY 211
           GDYN++P   D YNP  W  DA    E R  +++L   G+TDA+RA      +Y+FWDY+
Sbjct: 118 GDYNVVPTDEDIYNPRSWRKDALLQPESRACYERLLAQGWTDALRAQFPDEPVYTFWDYF 177

Query: 212 ADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
              W KN G+RIDH++LSP+    L +A +D   RG    SDH P  VSL
Sbjct: 178 RQHWQKNSGLRIDHLLLSPDLAPCLQTAGVDRWVRGQEHASDHAPTWVSL 227


>gi|472869|emb|CAA54234.1| ARP protein [Arabidopsis thaliana]
          Length = 527

 Score =  151 bits (381), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 74/272 (27%), Positives = 118/272 (43%), Gaps = 23/272 (8%)

Query: 4   VTVATWNVNSIRARIH----NLAAWIKENNPDIICLQETKTEDKNFPFETLQS---LNYH 56
           V V TWNVN +R  +     +     +  N DI+CLQETK + K+   E ++      Y 
Sbjct: 267 VKVMTWNVNGLRGLLKFESFSALQLAQRENFDILCLQETKLQVKDV--EEIKKTLIDGYD 324

Query: 57  IETCGQK----SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
                       Y+G AI+S+ +P+ +         D + R + A F     +  + N Y
Sbjct: 325 HSFWSCSVSKLGYSGTAIISRIKPLSVRYGTGLSGHDTEGRIVTAEFD----SFYLINTY 380

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
           +P+       +   +I    R L    + LE  +P++  GD N   +  D +NP   +  
Sbjct: 381 VPNSG-DGLKRLSYRIEEWDRTLSNHIKELEKSKPVVLTGDLNCAHEEIDIFNPAGNKRS 439

Query: 173 ACFTLEVRQ-SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
           A FT+E RQ     L + GF D  R  H     Y++W Y       NKG R+D+ ++S  
Sbjct: 440 AGFTIEERQSFGANLLDKGFVDTFRKQHPGVVGYTYWGYRHGGRKTNKGWRLDYFLVSQS 499

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             + +H + I     G    SDH P+ + L +
Sbjct: 500 IAANVHDSYILPDING----SDHCPIGLILKL 527


>gi|15227354|ref|NP_181677.1| ARP; DNA-(apurinic or apyrimidinic site) lyase [Arabidopsis
           thaliana]
 gi|8488963|sp|P45951|ARP_ARATH RecName: Full=Apurinic endonuclease-redox protein; AltName:
           Full=DNA-(apurinic or apyrimidinic site) lyase
 gi|3241944|gb|AAC23731.1| DNA-(apurinic or apyrimidinic site) lyase (ARP) [Arabidopsis
           thaliana]
 gi|330254890|gb|AEC09984.1| apurinic endonuclease-redox protein [Arabidopsis thaliana]
          Length = 536

 Score =  151 bits (381), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 74/272 (27%), Positives = 118/272 (43%), Gaps = 23/272 (8%)

Query: 4   VTVATWNVNSIRARIH----NLAAWIKENNPDIICLQETKTEDKNFPFETLQS---LNYH 56
           V V TWNVN +R  +     +     +  N DI+CLQETK + K+   E ++      Y 
Sbjct: 276 VKVMTWNVNGLRGLLKFESFSALQLAQRENFDILCLQETKLQVKDV--EEIKKTLIDGYD 333

Query: 57  IETCGQK----SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
                       Y+G AI+S+ +P+ +         D + R + A F     +  + N Y
Sbjct: 334 HSFWSCSVSKLGYSGTAIISRIKPLSVRYGTGLSGHDTEGRIVTAEFD----SFYLINTY 389

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
           +P+       +   +I    R L    + LE  +P++  GD N   +  D +NP   +  
Sbjct: 390 VPNSG-DGLKRLSYRIEEWDRTLSNHIKELEKSKPVVLTGDLNCAHEEIDIFNPAGNKRS 448

Query: 173 ACFTLEVRQ-SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
           A FT+E RQ     L + GF D  R  H     Y++W Y       NKG R+D+ ++S  
Sbjct: 449 AGFTIEERQSFGANLLDKGFVDTFRKQHPGVVGYTYWGYRHGGRKTNKGWRLDYFLVSQS 508

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             + +H + I     G    SDH P+ + L +
Sbjct: 509 IAANVHDSYILPDING----SDHCPIGLILKL 536


>gi|297739882|emb|CBI30064.3| unnamed protein product [Vitis vinifera]
          Length = 542

 Score =  151 bits (380), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 68/272 (25%), Positives = 117/272 (43%), Gaps = 23/272 (8%)

Query: 4   VTVATWNVNSIRARIH--NL--AAWIKENNPDIICLQETKTEDKNFPFETLQS---LNYH 56
           V + +WNVN +R  +           +  + D++ LQETK ++K+   E ++      Y 
Sbjct: 282 VKLMSWNVNGLRGLLKSKGFSALKLAQREDFDVLSLQETKLQEKDV--EAIKQSVIEGYE 339

Query: 57  IETCGQK----SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
                       Y+G AI+S+ +P+ +   L   D D + R + A F     +  + + Y
Sbjct: 340 NSFWTCSVSKLGYSGTAIISRIKPLSVRYGLGISDHDSEGRLLTAEFE----SFYLLSGY 395

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
           +P+       +   +++     L    + LE  +P+I  GD N   Q  D ++P      
Sbjct: 396 VPNSG-DGLKRLSYRVTQWDSALGSYMKELEKSKPVILTGDLNCAHQEIDIHDPAGNRRS 454

Query: 173 ACFTLEVRQ-SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
           A FT E RQ   +   + GF D+ R  H     Y++W Y       NKG R+D+ ++S  
Sbjct: 455 AGFTDEERQSLEKNFLSKGFVDSFRKQHPGVVGYTYWGYRNGCRKSNKGWRLDYFLVSES 514

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
               +H + I     G    SDH P+ + L +
Sbjct: 515 IADKVHDSYILPDIGG----SDHCPIGLVLKL 542


>gi|225441351|ref|XP_002274714.1| PREDICTED: similar to apurinic endonuclease-redox protein [Vitis
           vinifera]
          Length = 490

 Score =  151 bits (380), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 68/272 (25%), Positives = 117/272 (43%), Gaps = 23/272 (8%)

Query: 4   VTVATWNVNSIRARIH--NL--AAWIKENNPDIICLQETKTEDKNFPFETLQS---LNYH 56
           V + +WNVN +R  +           +  + D++ LQETK ++K+   E ++      Y 
Sbjct: 230 VKLMSWNVNGLRGLLKSKGFSALKLAQREDFDVLSLQETKLQEKDV--EAIKQSVIEGYE 287

Query: 57  IETCGQK----SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
                       Y+G AI+S+ +P+ +   L   D D + R + A F     +  + + Y
Sbjct: 288 NSFWTCSVSKLGYSGTAIISRIKPLSVRYGLGISDHDSEGRLLTAEFE----SFYLLSGY 343

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
           +P+       +   +++     L    + LE  +P+I  GD N   Q  D ++P      
Sbjct: 344 VPNSG-DGLKRLSYRVTQWDSALGSYMKELEKSKPVILTGDLNCAHQEIDIHDPAGNRRS 402

Query: 173 ACFTLEVRQ-SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
           A FT E RQ   +   + GF D+ R  H     Y++W Y       NKG R+D+ ++S  
Sbjct: 403 AGFTDEERQSLEKNFLSKGFVDSFRKQHPGVVGYTYWGYRNGCRKSNKGWRLDYFLVSES 462

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
               +H + I     G    SDH P+ + L +
Sbjct: 463 IADKVHDSYILPDIGG----SDHCPIGLVLKL 490


>gi|197120879|ref|YP_002132830.1| exodeoxyribonuclease III Xth [Anaeromyxobacter sp. K]
 gi|196170728|gb|ACG71701.1| exodeoxyribonuclease III Xth [Anaeromyxobacter sp. K]
          Length = 265

 Score =  151 bits (380), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 60/259 (23%), Positives = 103/259 (39%), Gaps = 13/259 (5%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + TWNVN IRAR   +  +I    PD++CLQE K      P    +   Y     G+ 
Sbjct: 1   MKIGTWNVNGIRAREAQVGEFIAREAPDVVCLQEIKAPPSKVPPSLCELEGYWCLWHGET 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +Y+GVA+L +               D++ R            + + ++Y+P+G    + K
Sbjct: 61  AYSGVALLVRKAIAPERPAFVHPPFDLETRIATCELGG----VTVASIYVPNGGKDLAAK 116

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
                  ++   RFA+        L+  GD N+     D +             E R  F
Sbjct: 117 LRF----LEAMERFAADAQASGRRLVLCGDLNVARTDLDVHPKERKAGAIGQLPEERALF 172

Query: 184 QKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           +++ + G  D  RA       L+++W  + +   +N G RID+++ S    +     R+ 
Sbjct: 173 ERILSRGLVDVGRALDPANEGLFTWWAPWRNLRQRNIGWRIDYVLASASLAASATRCRVL 232

Query: 243 TKPRGWTKPSDHTPVIVSL 261
                    SDH PV+   
Sbjct: 233 AD----FGTSDHAPVVAEF 247


>gi|261337556|ref|ZP_05965440.1| exodeoxyribonuclease III [Bifidobacterium gallicum DSM 20093]
 gi|270277965|gb|EFA23819.1| exodeoxyribonuclease III [Bifidobacterium gallicum DSM 20093]
          Length = 286

 Score =  151 bits (380), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 59/285 (20%), Positives = 103/285 (36%), Gaps = 24/285 (8%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFP------FETLQSLNY 55
            +TV T N+N IRA        W++++ PD++CLQE +              E  ++   
Sbjct: 2   TITVTTANLNGIRAAERKGFEKWVQKHTPDVLCLQELRAPQDAIDSIFEQYAEDYKNAGK 61

Query: 56  HIETCGQKSYNGVAILSKYQ-----------PIEIVTHLPGDDLDVQARFIEATFTINTQ 104
             +  G  + + V++                   +     G+D D          T    
Sbjct: 62  IAQPEGLSTIDQVSVFKGRAGVGELSSLEVLDKRVGLPGDGEDADTGRWTEMDVKTPQGY 121

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRL----ELEEPLIFAGDYNIIPQP 160
            + + NLY   GN    TK + K   +   +  A+Q         +  +  GD+NI    
Sbjct: 122 VITVCNLYNHAGNMDDPTKMEQKYHMLDAIMERAAQLRDEAAHGGKQSLIVGDFNIAHTD 181

Query: 161 HDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSWSKN 218
            D  +    E  + F+ + R    KL +      +      D    Y++W     ++  N
Sbjct: 182 LDIKDATTNETHSGFSPKERAYITKLIDEYEFVDVVRDLAGDIQGPYTWWSNRGRAFENN 241

Query: 219 KGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            G RID+   +PE         I      + + SDH P+ V+ D+
Sbjct: 242 VGWRIDYQFATPEIAQTARGFEISRAKAWYARWSDHAPLTVTYDV 286


>gi|301166270|emb|CBW25845.1| putative exodeoxyribonuclease [Bacteriovorax marinus SJ]
          Length = 256

 Score =  151 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 52/261 (19%), Positives = 89/261 (34%), Gaps = 7/261 (2%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNV  IRA     L  W  E   ++ C QETK   +    + +   + H      
Sbjct: 1   MKIYSWNVAGIRACEKKGLYDWYLEELAEVYCFQETKALPEQLNDQLVNPKS-HSAIYAP 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
               G + +S +    I           +      T         + N Y P+G    + 
Sbjct: 60  AVKKGYSGVSTWVKSGIEHKHTIGLGIEEFDNEGRTIITEFDNFFLFNCYFPNGQRDHAR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                        +      + ++ +I  GDYN    P D  NP        F    R+ 
Sbjct: 120 VPYKMSYCKAIEEKAQELHQQFKKDIIITGDYNTAHHPIDLANPKTNTKSTGFLPLEREW 179

Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
               + +G+ D  R         Y++W Y ++   +N G RID+   + +    +     
Sbjct: 180 MDHFEEIGYVDIFRHFTPEENGHYTWWTYRSNCRERNIGWRIDYFWTNKDMLKNIKGCSH 239

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            T   G    SDH P+ + L+
Sbjct: 240 HTDILG----SDHCPISLELN 256


>gi|21674945|ref|NP_663010.1| AP Xth family endonuclease [Chlorobium tepidum TLS]
 gi|21648175|gb|AAM73352.1| AP (apurinic or apyrimidinic) endonuclease, xth family [Chlorobium
           tepidum TLS]
          Length = 253

 Score =  150 bits (379), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 59/261 (22%), Positives = 100/261 (38%), Gaps = 9/261 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + TWN+N IRAR   LAAW+    PDI+ L+E K +    P        Y     G  
Sbjct: 1   MNIFTWNINGIRARKEALAAWLDSRKPDIVVLEEIKAQVSEIPETIRDFAGYRKFWNGST 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
              G + +        +     +           T  ++     +   Y+P G+     +
Sbjct: 61  FKKGYSGVGLLVRDGSLDEFTCEPPPF--DIENRTLVLHAPQFTLIGTYVPRGD--GEER 116

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  K+ ++     F ++ L     +I  GD N+  +  D +             E R + 
Sbjct: 117 YAVKLRYLADLKAFIAELLTEGREVILLGDINVALRDIDVHRSQNKPGAIGLRPEERAAI 176

Query: 184 QKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           +    +G  D +R  +     L+++W  +  +  +N G RID I L+P     +    +D
Sbjct: 177 EAHLGLGLLDIVRELNPDKKDLFTWWPNWKFARERNLGWRIDCIYLTPALARKVSGVSVD 236

Query: 243 TKPRGWTKPSDHTPVIVSLDI 263
                  K SDH PV V L +
Sbjct: 237 LD----EKSSDHAPVSVKLSL 253


>gi|220915579|ref|YP_002490883.1| exodeoxyribonuclease III Xth [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219953433|gb|ACL63817.1| exodeoxyribonuclease III Xth [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 264

 Score =  150 bits (379), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 60/259 (23%), Positives = 103/259 (39%), Gaps = 13/259 (5%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + TWNVN IRAR   +  +I    PD++CLQE K      P    +   Y     G+ 
Sbjct: 1   MKIGTWNVNGIRAREAQVGEFIAREGPDVVCLQEIKAPPSKVPPSLCELEGYWCLWHGET 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +Y+GVA+L +               D++ R            + + ++Y+P+G    + K
Sbjct: 61  AYSGVALLVRKAIAPERPAFVHPPFDLETRIATCELGG----VTVASIYVPNGGKDLAAK 116

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
                  ++   RFA+        L+  GD N+     D +             E R  F
Sbjct: 117 LRF----LEAMERFAADAQASGRRLVLCGDLNVARTDLDVHPKERKAGAIGQLPEERALF 172

Query: 184 QKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           +++ + G  D  RA       L+++W  + +   +N G RID+++ S    +     R+ 
Sbjct: 173 ERILSRGLVDVGRALDPANEGLFTWWAPWRNLRQRNIGWRIDYVLASASLAASATRCRVL 232

Query: 243 TKPRGWTKPSDHTPVIVSL 261
                    SDH PV+   
Sbjct: 233 AD----FGTSDHAPVVAEF 247


>gi|242004144|ref|XP_002422991.1| Recombination repair protein, putative [Pediculus humanus corporis]
 gi|212505907|gb|EEB10253.1| Recombination repair protein, putative [Pediculus humanus corporis]
          Length = 332

 Score =  150 bits (379), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 70/258 (27%), Positives = 122/258 (47%), Gaps = 13/258 (5%)

Query: 5   TVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFE-TLQSLNYHIETCGQ 62
            +++WNV S+++    N   +++  +PD++C QETK  +KN P E  L   + +     +
Sbjct: 79  KISSWNVVSLKSITNKNGMEYVRRESPDVMCFQETKCSEKNAPSESKLPGYHRYFAAGVK 138

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           + Y GVA+ SK +P+ +   +   + D + R I A +        +   Y+P+      T
Sbjct: 139 EGYAGVALYSKLKPLSVKIGIGHKEHDTEGRVITAEYE----DFYLVTAYVPNAGRGLVT 194

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                   +    +   ++L+ E+P+I  GD N+     D  NP      A FT E R  
Sbjct: 195 LPKRLKWDVA--FKGYLKKLDSEKPVILCGDLNVAHNEIDLKNPSTNTKTAGFTQEERDG 252

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F KL N GF D  R  +      Y++W+Y  ++ S+N G R+D+ ++S    S +  + I
Sbjct: 253 FTKLLNAGFIDTFRKLYPNKEGAYTYWNYIGNARSRNAGWRLDYFVVSERIMSTVCDSVI 312

Query: 242 DTKPRGWTKPSDHTPVIV 259
             +  G    SDH P+ +
Sbjct: 313 RKEVYG----SDHCPITL 326


>gi|282159248|gb|ADA78639.1| exodeoxyribonuclease III [Francisella tularensis subsp. tularensis
           NE061598]
          Length = 258

 Score =  150 bits (378), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 59/264 (22%), Positives = 111/264 (42%), Gaps = 17/264 (6%)

Query: 7   ATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQ 62
            T+N N IRA        W K  + D +C+QETK +      +         Y  +   +
Sbjct: 1   MTFNANGIRAAARKGFWEWFKTQDVDFLCMQETKAQFHQLEKDIEHFPTGYYYEFKDAVK 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +P++++  L  D  D + R+I+  +        I +LYLP G+     
Sbjct: 61  KGYSGTAIYAKKKPLKVIKELGLDWADDEGRYIQFDYE----NFSIASLYLPSGS-SGDV 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF--TLEVR 180
           + + K+ +++++     +++E     I  GD+NI+ +  D  N              E  
Sbjct: 116 RQEYKMQFLEKYKEILKEQVESGRDFIVCGDFNIVHKEIDIKNWKSNYGKTSGVLPEEQA 175

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH--S 238
                  ++G+ D  R  +     Y++W     + + N G RID+ + +      +   S
Sbjct: 176 WLDHIFDDLGWVDTFRVINHEPLQYTWWSNRGQARANNVGWRIDYHISTSALKDKVVPES 235

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
             +  +       SDH P+ ++ D
Sbjct: 236 DYVYKE----NWFSDHAPLTINYD 255


>gi|111017313|ref|YP_700285.1| exodeoxyribonuclease III [Rhodococcus jostii RHA1]
 gi|110816843|gb|ABG92127.1| probable exodeoxyribonuclease III [Rhodococcus jostii RHA1]
          Length = 304

 Score =  150 bits (378), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 57/303 (18%), Positives = 103/303 (33%), Gaps = 44/303 (14%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + +AT+NVN IRA        W+ +  PD++ LQE +   +  P       +   +    
Sbjct: 1   MRIATFNVNGIRAAQRRGFEDWLGDRGPDVVALQEVRARAEAIPPGVFGHYHLTYDEGDV 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT----------------- 105
              NGVA+L++  P+ + T      +            ++ +                  
Sbjct: 61  AGRNGVAVLTRGAPVAVRTWSGTALMRAPGEMHTDRVELDPEPLARGLGEFANQGRYVEV 120

Query: 106 ------LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL--------------- 144
                 + + ++YLP G      +   ++           +++                 
Sbjct: 121 DLAEAPITVASMYLPKGGLPAHLQKPGRMREAPDGGARYDRKMRFLSAFARQLTRSRRTA 180

Query: 145 ---EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAI--RATH 199
                 L+  GD NI     D  N         F  E R+ F  + +      +  R   
Sbjct: 181 RARGRELLLMGDLNIAHTRSDVRNWRRSNQAEGFLPEEREWFDSILSPRTLVDVVRRQHP 240

Query: 200 DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
                YS+W +   S+  + G RID+ + +P+      +A  D  P    + SDH PV+V
Sbjct: 241 GVDGPYSWWSWLGQSFVNDIGWRIDYHLATPDLARAAVTAGTDRDPVADRRMSDHAPVVV 300

Query: 260 SLD 262
             D
Sbjct: 301 DYD 303


>gi|218887544|ref|YP_002436865.1| exodeoxyribonuclease III [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218758498|gb|ACL09397.1| exodeoxyribonuclease III [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 259

 Score =  150 bits (378), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 69/269 (25%), Positives = 108/269 (40%), Gaps = 17/269 (6%)

Query: 3   VVTVATWNVNSIRARIHNL--AAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET- 59
           ++ + +WNVN IRA +       W    +  I+ LQETK E +  P        +     
Sbjct: 2   LLKLYSWNVNGIRA-LSGKPEWNWFAGCDGHIVGLQETKAEPEQVPAAHRDPEGWKAWWL 60

Query: 60  --CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
               +K Y+GVA+ S+ +P+ +   +P      + R I   F        I       G 
Sbjct: 61  ASRVKKGYSGVAVFSRVEPLAVHLDMPDPAWQGEGRCIHLEFPAF-HYFNIYFPNGGQGE 119

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
              + K               ++ L   +P++  GD+N   +P D   P   E+ + F  
Sbjct: 120 ERLNYKLGF-----YDAFLNHAEDLRRHKPIVVCGDFNTAHRPIDLARPKDNEDISGFLP 174

Query: 178 EVRQSFQKLQNMGFTDAIR-ATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
             R    +    G+ D  R    DT H YS+W Y   +  +N G RID+  +S E    +
Sbjct: 175 IERAWMDRFTAAGYVDTFRLVQGDTPHAYSWWSYKTRARERNVGWRIDYFFVSEELRGAV 234

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
             A ID    G    SDH PV ++LD+  
Sbjct: 235 RDAWIDMHVMG----SDHCPVGLALDVDM 259


>gi|332040638|gb|EGI77013.1| exodeoxyribonuclease III Xth [Hylemonella gracilis ATCC 19624]
          Length = 265

 Score =  149 bits (377), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 64/269 (23%), Positives = 113/269 (42%), Gaps = 14/269 (5%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFP--FETLQSLNYHIET 59
           +  + + N+N IR+     L AW+++  PD IC+QE K +  +    FE L  L  H   
Sbjct: 1   MFNLVSLNLNGIRSATSKGLEAWLEKTRPDCICVQEVKAQAPDVAGKFEQLAGLQGHFHY 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GVA+ +K+ P +++      + D + R++E  +    + L + + Y P G+  
Sbjct: 61  AEKKGYSGVAVYTKHAPSDVLIGYGSPEFDAEGRWVELRYDTPKRKLSLISCYFPSGSSG 120

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +        + +     Q L  +   I  GD NI  +  D  N      ++ F  E 
Sbjct: 121 EDRQQAKFRFLDEMWA--HLQSLRGQREFILCGDVNIAHKEMDLKNWKGNLKNSGFLPEE 178

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHL-----YSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
           R    KL +      +              Y++W     +++KN G RID+ + +P   +
Sbjct: 179 RAWMTKLLDPQQGGLVDVYRTLEPEAIDTAYTWWSNRGQAYAKNVGWRIDYHLATPALAA 238

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           L     +        K SDH P+ V  D+
Sbjct: 239 LARQTGVYKD----EKFSDHAPLSVRYDL 263


>gi|209966061|ref|YP_002298976.1| endonuclease [Rhodospirillum centenum SW]
 gi|209959527|gb|ACJ00164.1| endonuclease [Rhodospirillum centenum SW]
          Length = 266

 Score =  149 bits (377), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 78/267 (29%), Positives = 124/267 (46%), Gaps = 12/267 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG-Q 62
           + + TWN+NS+R R+  L   + E+ PD++CLQETKT D  FP   L    Y        
Sbjct: 1   MRLCTWNINSVRLRLPLLLRLLDEHAPDVVCLQETKTVDDTFPLRELAERGYRFAHIHGM 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           KSYNGVAILS+ +             D +     AT       + + NLY+P G  +   
Sbjct: 61  KSYNGVAILSRLELGAREVRHWCGREDCRH---IATTLPVGPGIELHNLYIPAGGDVPDP 117

Query: 123 ----KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
               K+  K+ ++   +R+  ++   + P+I  GD NI P   D ++     +    T  
Sbjct: 118 AVNEKFAHKLQFLDEMIRWWPEQRSPDRPMILVGDLNIAPLETDVWSHRQLLDVVSHTPV 177

Query: 179 VRQSFQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSL 235
             +   ++Q          R   +T  LY++W Y +  W + ++G R+DH+ ++P     
Sbjct: 178 EVEKLTQVQRTLGWVDAVRRFVPETEKLYTWWSYRSADWAASDRGRRLDHVWVTPPLAPA 237

Query: 236 LHSARIDTKPRGWT-KPSDHTPVIVSL 261
           L    +  + RGW  KPSDH PV+V  
Sbjct: 238 LAGTTVLREARGWEPKPSDHVPVLVDF 264


>gi|326793816|ref|YP_004311636.1| exodeoxyribonuclease III Xth [Marinomonas mediterranea MMB-1]
 gi|326544580|gb|ADZ89800.1| exodeoxyribonuclease III Xth [Marinomonas mediterranea MMB-1]
          Length = 258

 Score =  149 bits (377), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 62/266 (23%), Positives = 113/266 (42%), Gaps = 13/266 (4%)

Query: 4   VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETL---QSLNYHIET 59
           + V + NVN IR A       W+   NPD++CLQ+ + ++++         +   Y  ++
Sbjct: 1   MKVISLNVNGIRQAAERGFFDWMVRQNPDVVCLQDLQVDERSLNDSVFFPPEYNTYFFDS 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
                  GVAI  K  P  I+T +   + D + RFI+A F      + + +   PHG+  
Sbjct: 61  MEDPEQAGVAIYCKAMPKAIMTGMGFPECDFEGRFIQADFD----NVSVASFLAPHGSNN 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-E 178
                  K ++++ F     +        IF G  N+   P D  +  + + ++ F   E
Sbjct: 117 EEPLQAHKYAFMEGFKNHLIKTRRKRREFIFCGTANVARSPIDVSSWFVNQRNSGFLPDE 176

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
            +   +      + DA R  +     Y++W  Y  +W  N+G R+D+ + +P   + +  
Sbjct: 177 RKWINEIFNEHEYIDAYRQVNKQDKQYTWWPDYERAWKLNEGGRLDYQITTPGIKNQIQG 236

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIP 264
             +    R     SDH P+I+  DI 
Sbjct: 237 GGVYKGQR----FSDHAPLIMEYDID 258


>gi|241766798|ref|ZP_04764623.1| exodeoxyribonuclease III Xth [Acidovorax delafieldii 2AN]
 gi|241362815|gb|EER58576.1| exodeoxyribonuclease III Xth [Acidovorax delafieldii 2AN]
          Length = 271

 Score =  149 bits (377), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 69/271 (25%), Positives = 111/271 (40%), Gaps = 16/271 (5%)

Query: 2   SVVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFP--FETLQSLNYHIE 58
           S+  + + N+N IR A    +  WI    PD IC+QE K +  +    FE L  L  H  
Sbjct: 4   SLFKLTSLNLNGIRSAASKGVERWIAATRPDCICVQEVKAQAADIATRFEQLAGLQGHFH 63

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
              +K Y+GV I ++++P +++      + D + R+IE  F    + L I + Y P G+ 
Sbjct: 64  FAQKKGYSGVGIYTRHEPSDVIAGYGSPEFDAEGRYIELRFDTPARKLSIISAYFPSGSS 123

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
               +                   + E   I  GD NI  Q  D  N    + ++ F  E
Sbjct: 124 GEERQLA--KYRFLEAFHPHLMATKGEREFILCGDINIAHQQIDLKNWRSNQKNSGFLPE 181

Query: 179 VRQSFQKLQN-----MGFTDAIRATHDT--HHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
            R    KL +      G  D  R    T     Y++W     +++ N G R+D+ + +P 
Sbjct: 182 ERAWMTKLLHTTDPGGGLVDVYRQLQPTATDTAYTWWSNRGQAYANNVGWRLDYHLATPA 241

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
             +L  +  I        K SDH P+ V  +
Sbjct: 242 LAALARAEHIYKD----EKFSDHAPITVDYE 268


>gi|228909564|ref|ZP_04073387.1| Exodeoxyribonuclease [Bacillus thuringiensis IBL 200]
 gi|228849853|gb|EEM94684.1| Exodeoxyribonuclease [Bacillus thuringiensis IBL 200]
          Length = 244

 Score =  149 bits (376), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 59/243 (24%), Positives = 108/243 (44%), Gaps = 12/243 (4%)

Query: 21  LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80
              +++E++ DI CLQE K ++       L+    +     +K Y+G AI SK +P+ + 
Sbjct: 12  FLEYLEESSADIFCLQEIKLQEGQIDLN-LEGYYTYWNYAVKKGYSGTAIFSKKEPLSVT 70

Query: 81  THLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQ 140
             L  ++ D + R I   F                 +     + D ++ W   F  +  +
Sbjct: 71  YGLGIEEHDQEGRLITLEFEDFYMI-----TLYTPNSKRGLERLDYRMKWEDDFRSYIKR 125

Query: 141 RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHD 200
            L+ ++ +IF GD N+  +  D  NP     +  F+ E R+ F  +   GF D  R  + 
Sbjct: 126 -LDEKKTVIFCGDLNVAHKEIDLKNPKSNRKNPGFSDEEREKFTCILEEGFVDTYRYLYP 184

Query: 201 -THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
                YS+W Y   + +KN G R+D+ ++S      +   +I+++  G    SDH PV +
Sbjct: 185 NQEGAYSWWSYRMGARAKNIGWRLDYFVVSERMKDQITEVKINSEVMG----SDHCPVEL 240

Query: 260 SLD 262
            ++
Sbjct: 241 YIN 243


>gi|225351376|ref|ZP_03742399.1| hypothetical protein BIFPSEUDO_02970 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225157720|gb|EEG71003.1| hypothetical protein BIFPSEUDO_02970 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 286

 Score =  149 bits (376), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 66/286 (23%), Positives = 99/286 (34%), Gaps = 26/286 (9%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI---- 57
            +T+ T NVN IRA     +  W   N PD+ C+QE +               +      
Sbjct: 2   TITITTSNVNGIRAAKRKGIEEWAGRNTPDVWCMQEVRAPQNEIDP-IFDEFGFEYSTAG 60

Query: 58  ------------ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR--FIEATFTINT 103
                       E C  K   GV +LS    ++    LPG + DV +         T   
Sbjct: 61  RISDQSELHRMNEICRIKGRAGVGLLSALPVVDKRYGLPGLEDDVDSGRWIEADMQTPQG 120

Query: 104 QTLRIGNLYLPHGNPITS----TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159
             + +  +Y+  GN         KY    + + R  +   +     +  +  GD+NI   
Sbjct: 121 YVITVVCVYVHAGNTDDPEKMKQKYRFLDTMLIRMEQLRDEAAHGGKQAVLCGDFNIAHT 180

Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSWSK 217
           P D  N    E  A F  E R    K         +      D    Y++W     ++  
Sbjct: 181 PLDIKNAKANETHAGFLPEERAYVDKWLGELEFVDVMRNLAGDIQGPYTWWSQRGRAFDN 240

Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           N G RID+   +PE         ID  P    + SDH P+ +  DI
Sbjct: 241 NVGWRIDYQFATPELAETACGFVIDKAPTYDLRWSDHAPLSIMYDI 286


>gi|257092320|ref|YP_003165961.1| exodeoxyribonuclease III Xth [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
 gi|257044844|gb|ACV34032.1| exodeoxyribonuclease III Xth [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
          Length = 266

 Score =  149 bits (376), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 60/275 (21%), Positives = 107/275 (38%), Gaps = 15/275 (5%)

Query: 3   VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++ + T N+N IR A    L +W    N  IICLQE K +  +   E  +    H     
Sbjct: 1   MLRIITLNLNGIRSAWRKGLYSWSVAQNAHIICLQELKAQHADLGDEMHKPDGLHTYYRY 60

Query: 62  --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
              K Y+GV +  + +P  +V  L   + D + R++ A F   +                
Sbjct: 61  AENKGYSGVGLWCRKKPDRVVDVLGSPEFDREGRYLRADFGALSV-----VCLYQPSGSS 115

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
           +  + + K  ++        +       ++  GD+NI  Q  D  N      ++ F  E 
Sbjct: 116 SEQRQEAKFRFMALIYPHLLELAASGRDVVVCGDWNIAHQEIDLKNWRSNRRNSGFLPEE 175

Query: 180 RQSFQKL-QNMGFTDAIRATHDT--HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
           R    +L    G+ D  R  H       Y++W     +W+KN G R+D+ + +P   +  
Sbjct: 176 RAWVSRLLNEGGWCDVYRRLHPESTEESYTWWSNRGQAWAKNVGWRLDYQLATPAIAATA 235

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271
             A +  + R     SDH P+ +  +      + +
Sbjct: 236 RHAAVYKEQR----FSDHAPLTIDYEYDLETDRGE 266


>gi|114566736|ref|YP_753890.1| DNA-(apurinic or apyrimidinic site) lyase [Syntrophomonas wolfei
           subsp. wolfei str. Goettingen]
 gi|114337671|gb|ABI68519.1| DNA-(apurinic or apyrimidinic site) lyase [Syntrophomonas wolfei
           subsp. wolfei str. Goettingen]
          Length = 237

 Score =  149 bits (376), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 52/245 (21%), Positives = 99/245 (40%), Gaps = 11/245 (4%)

Query: 20  NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETCGQKSYNGVAILSKYQPI 77
               W+KE  PD++CLQETK   +      +    Y     +  ++ Y+GVA   + +P+
Sbjct: 2   GFIQWLKEEQPDVLCLQETKAHPEQLEESLVNIKGYQSCWNSGERRGYSGVACYFQKEPL 61

Query: 78  EIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF 137
           ++  +L  ++ D + R + +          +          +   +   K+ + +  + F
Sbjct: 62  QVEKNLGVEEFDREGRVLISFHEN-----LVLLNVYFPNGQMGEERLAYKLRFYEYLINF 116

Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA 197
             +  +    L+  GD+N   +  D  NP   E  + F    R+   +  + G+ DA R 
Sbjct: 117 CEELKKRYPRLVICGDFNTAHREIDLKNPKANEGRSGFLPIEREMLDRFLSYGYVDAFRY 176

Query: 198 THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257
            +     YS+W Y   +  +N G RID   +S +    +    +     G    SDH P+
Sbjct: 177 LYPEKVQYSWWSYRTRARERNAGWRIDCFYVSEKLLDDIIDCEVLDHIPG----SDHCPI 232

Query: 258 IVSLD 262
            + L 
Sbjct: 233 ALYLK 237


>gi|313232077|emb|CBY09188.1| unnamed protein product [Oikopleura dioica]
          Length = 392

 Score =  149 bits (375), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 71/272 (26%), Positives = 117/272 (43%), Gaps = 19/272 (6%)

Query: 3   VVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFP----FETLQSLNY-- 55
           +  + TWNV  + A I       +K  + DI+CLQETK   K  P     E L+   Y  
Sbjct: 130 MFRIVTWNVAGLYACIKKDFCKAVKTLDCDILCLQETKLSLKKPPPAEIAEQLKEWKYRN 189

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
           +  + G+  Y+G AILSK +PI +   +          F  +      +   + +     
Sbjct: 190 YANSEGKAGYSGTAILSKSKPISVQRGIGKTKH---DDFGRSCTAEFEKFFLVTSYVPNS 246

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND-AC 174
           G        D + +  +  LR    +L  ++P+I+ GD N+     D  N     N  A 
Sbjct: 247 GR--GLVNLDYRTNEWESDLRNYLTKLNKDKPVIYCGDLNVAHTAIDLKNDKSNYNKSAG 304

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLS-PEA 232
           +T       +KL  +G+ DA R  +      Y+FW Y   + SKN G R+D+ ++   + 
Sbjct: 305 YTQAEIDELEKLLELGYVDAYRKLYPAEEDCYTFWSYMGGARSKNVGWRLDYFLMKIKDC 364

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
              +    + +K +G    SDH PV + L++P
Sbjct: 365 EEWIEDVVVHSKVQG----SDHCPVEIKLNLP 392


>gi|310831095|ref|YP_003969738.1| putative apurinic-apyrimidinic endonuclease 1 [Cafeteria
           roenbergensis virus BV-PW1]
 gi|309386279|gb|ADO67139.1| putative apurinic-apyrimidinic endonuclease 1 [Cafeteria
           roenbergensis virus BV-PW1]
          Length = 262

 Score =  149 bits (375), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 72/271 (26%), Positives = 109/271 (40%), Gaps = 20/271 (7%)

Query: 1   MSVVTVATWNVNSIRARIH--NLAAWIKENNPDIICLQETKTEDKNFP-----FETLQSL 53
           M    +  WN+N I+A +   NL   I+   P IIC+ ETK             E ++  
Sbjct: 1   MPT-KIIAWNINGIKAHLKKDNLFDLIETEKPHIICMGETKISCPFIDVQNQLKEKIKGY 59

Query: 54  NYHIETCG--QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
            Y   +    +K Y+G AI SK +PI     +     D + R I   F            
Sbjct: 60  KYRYWSPCLVKKGYSGTAIFSKRKPISTYLGMNQPGEDDEGRMITLEFKE-----YYLIH 114

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
                +     +   +     +  R     L+  +P+I  GD N+  +  D  NP   + 
Sbjct: 115 VYTPNSGQGLVRLQYRTEEWDKNFRKYCANLQKIKPIIICGDLNVANENIDLANPSSNKK 174

Query: 172 DACFTL-EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230
           +A FT  E +     L  +   D  R  + T   YSFW YY ++  KN G RID+ ++S 
Sbjct: 175 NAGFTDVERKSFKLTLTKLNLIDTFRYLYPTDIKYSFWTYYHNARPKNIGWRIDYFLVSE 234

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           +    +  + I T   G    SDH PVI+ L
Sbjct: 235 KLLPKVKDSNILTHIMG----SDHAPVILKL 261


>gi|94984569|ref|YP_603933.1| exodeoxyribonuclease III (xth) [Deinococcus geothermalis DSM 11300]
 gi|94554850|gb|ABF44764.1| exodeoxyribonuclease III (xth) [Deinococcus geothermalis DSM 11300]
          Length = 267

 Score =  149 bits (375), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 60/265 (22%), Positives = 103/265 (38%), Gaps = 18/265 (6%)

Query: 2   SVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           S + V T NVN +R+ +   L  W+    PD++ LQE +        E    L Y     
Sbjct: 11  STLKVTTLNVNGLRSALRKGLTTWLARERPDVLLLQEVRAHPM---PEAFSDLGYAGAWF 67

Query: 61  --GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
              +  Y+GVA+LS +   ++   +       +        +     +R  ++YLP G+ 
Sbjct: 68  GAQKAGYSGVALLSLHPLSDVRAGM----AHPEMDAEGRVLSAVVWGVRFVSVYLPSGSS 123

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
                   K   ++ +  +    L    PL+  GDYNI     D  N      ++ F   
Sbjct: 124 SPER-QSFKDRVLEDYHAWTQAALAEGLPLVIGGDYNIAHSELDLKNWRSNRKNSGFLPH 182

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
            R         G TD  RA       Y++W     +++ + G RID+++    A   +  
Sbjct: 183 ERAWMSAHLACGLTDTHRAHLGERSEYTWWSQRGKAYANDVGWRIDYLLA---AGVPVRD 239

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263
             +D   R     SDH P+  ++D+
Sbjct: 240 LWVDRAAR----LSDHAPLTGTVDL 260


>gi|325000932|ref|ZP_08122044.1| exodeoxyribonuclease III [Pseudonocardia sp. P1]
          Length = 281

 Score =  149 bits (375), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 70/264 (26%), Positives = 113/264 (42%), Gaps = 8/264 (3%)

Query: 6   VATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL---NYH---IE 58
           +AT NVN +RA     L  W+   + D +CLQE +   +  P     +L    +H     
Sbjct: 8   LATANVNGVRAATGKGLLDWLAVADADAVCLQEVRARPEELPAALTDALAAAGWHLRLAP 67

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
               K  NGVA+LS+ +P  +         D+  R++E     +     +       G  
Sbjct: 68  CETAKGRNGVAVLSRSEPEAVRIGFGDPATDLDGRYLEVDLPGDLTVASLYLPKGVAGTD 127

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
               K     ++        ++       ++ AGD+NI P   D  N    + ++ F   
Sbjct: 128 KQDAKDAFLKTFGDHLRTAFARCAATGREMVVAGDWNIAPTEQDLRNWRNNQRNSGFLPH 187

Query: 179 VRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
            R+ F  L   G+TD +RA H  T   YS+W Y   ++  + G RIDH++ +P   +  H
Sbjct: 188 EREWFAGLLEHGWTDVVRALHPGTDGPYSWWTYRGRAFDNDVGWRIDHLLTTPGLAAAAH 247

Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261
            A ++  P   T+ SDH PV+V L
Sbjct: 248 EAVVERAPSHDTRWSDHAPVVVRL 271


>gi|307108235|gb|EFN56476.1| hypothetical protein CHLNCDRAFT_30910 [Chlorella variabilis]
          Length = 371

 Score =  148 bits (374), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 56/277 (20%), Positives = 100/277 (36%), Gaps = 27/277 (9%)

Query: 6   VATWNVNSIRARIHNLAA---------------WIKENNPDIICLQETKTEDKNFPFETL 50
           + +WNV  +RA +  +                   +    D++CLQE K ++ +   E L
Sbjct: 101 ILSWNVAGLRALLKKVKEVEAGTRNENIPTLVALAEAEQADVLCLQEIKLQEDH-CVEVL 159

Query: 51  QSL----NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
           + L     +H+     +   G +  +       ++   G   +             +   
Sbjct: 160 KELNLPEGWHVSWNCSRDKKGYSGTAIVSRQAPLSVSCGIGAEEHDGEGRVITAEFSAFY 219

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
            +       G      +   ++    +      +RLE  +P++  GD N+ P   D ++P
Sbjct: 220 LVNCYTPNSGE--GLKRLGYRVEKWDKDFSAYLKRLEQHKPVVVTGDLNVAPAEIDIHSP 277

Query: 167 IIWENDACFTL-EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225
                 A FT  E       L   GF D  R  +     Y++W Y  ++   NKG R+DH
Sbjct: 278 KTNLKSAGFTPQERASFAANLLGQGFVDCFRTQYPEAVAYTYWGYRFNARGNNKGWRLDH 337

Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
            ++S +  S LH         G    SDH P+ + L 
Sbjct: 338 FLVSQQLHSSLHDCYHLPAIMG----SDHCPLGLVLK 370


>gi|145529087|ref|XP_001450332.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124417943|emb|CAK82935.1| unnamed protein product [Paramecium tetraurelia]
          Length = 348

 Score =  148 bits (374), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 60/264 (22%), Positives = 102/264 (38%), Gaps = 7/264 (2%)

Query: 3   VVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETL-QSLNYHIET 59
            V +++WN+N IRA   +     ++ ++  DIICL E K +   F  E L      H   
Sbjct: 86  TVKISSWNINGIRAVTKHESAVQYLNDSKFDIICLNELKADQDVFDKENLGAKFGKHYFL 145

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
                 +           ++       D+ V     E                    +  
Sbjct: 146 YLNFCKSKAGYSGVAIASKVKPLSVKCDIGVDKHDQEGRTLTAEFEQFYLVSCYVPNSGQ 205

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              + D +        +   + L  ++P I  GD N+     D  NP   +  A FTL+ 
Sbjct: 206 KLERLDYRTKEWDIDFQNYLEGLRKKKPTILCGDLNVAHHEIDLSNPAGNKKTAGFTLQE 265

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R  F      G+ D+ R  H     YSF+   ++S S+NKG R+D+ +++ EA+  +  +
Sbjct: 266 RDQFSNYLQKGWVDSFRHLHPKEVKYSFFSARSNSRSQNKGWRLDYFIINKEASDAITVS 325

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
            I+    G    SDH P+   +D+
Sbjct: 326 DINLTVEG----SDHVPIECEVDL 345


>gi|255024226|ref|ZP_05296212.1| 3'-exo-deoxyribonuclease exoA [Listeria monocytogenes FSL J1-208]
          Length = 216

 Score =  148 bits (374), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 54/223 (24%), Positives = 95/223 (42%), Gaps = 9/223 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      + +E + DI CLQETK ++     + L +   +     +
Sbjct: 1   MKLISWNVNGLRAAVKKGFLEYFEEVDADIFCLQETKLQEGQIELD-LPAYKDYWNYAVK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +P+ +   L   + D + R I   F                   +   
Sbjct: 60  KGYSGTAIFTKVEPLSVQYGLGVPEHDTEGRVITLEFEEFFMVTVYTPNSQAELKRLDYR 119

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    +  +    + L+  +P++  GD N+  +  D  NP     +A F+ E R  
Sbjct: 120 M------TFEDAILEYVKNLDKTKPVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAK 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRID 224
           F    + GF D+ R  +      YS+W Y  ++ ++N G RID
Sbjct: 174 FSAFLDAGFIDSFRYFYPDLTDAYSWWSYRMNARARNTGWRID 216


>gi|123487248|ref|XP_001324898.1| exodeoxyribonuclease III family protein [Trichomonas vaginalis G3]
 gi|121907789|gb|EAY12675.1| exodeoxyribonuclease III family protein [Trichomonas vaginalis G3]
          Length = 289

 Score =  148 bits (373), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 79/283 (27%), Positives = 122/283 (43%), Gaps = 19/283 (6%)

Query: 3   VVTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTE-DKNFPFETLQSLNY--HIE 58
           V+ +ATWNV S+RAR   N   +I  + PDIIC+QETK   D     +  +   Y  +  
Sbjct: 8   VIKIATWNVASLRARWKDNFTFYINSSKPDIICIQETKFHVDMKESLKNFKLDGYKGYFF 67

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
              +  Y G  I +KY+P+ +       D        +  + INT  +            
Sbjct: 68  HAKKAGYAGTCIYTKYKPVSVKRSFADPDGRCITMEFKNFYLINTYVV---------NAG 118

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
               + D KI      +R     LE ++P+I+ GD N+  +P D +     E  A +T E
Sbjct: 119 EDLGRLDYKIKEWNPKIRNHIMELEKKKPVIWTGDLNVAHKPIDIWQAEGHEKIAGYTDE 178

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL--L 236
            R+ F    N G  D  R  H   H ++F++Y   + SKN+G RID+ +          +
Sbjct: 179 ERKWFDDFLNEGHIDIYRELHPESHEFTFFNYRGQAKSKNQGWRIDYFITGKGNIEKLGI 238

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMK 279
               I+    G    SDH PVI+  D  +  K  +  TS  ++
Sbjct: 239 SDCVIE----GTIDGSDHQPVILLADKDKIMKDDEPVTSSEVE 277


>gi|328767146|gb|EGF77197.1| hypothetical protein BATDEDRAFT_20862 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 394

 Score =  148 bits (373), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 62/265 (23%), Positives = 112/265 (42%), Gaps = 17/265 (6%)

Query: 5   TVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQ----SLNYHIET 59
               WNV  +RA +   +  +I+  + D++CLQETK                   Y    
Sbjct: 116 KFIAWNVAGLRASLKKDMMRYIEAEDADVVCLQETKMNAS-LDTSMFSRKQYPHQYWSHC 174

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GV +LSK +P+ +   +    +D + RF+   +        IG   +  G  +
Sbjct: 175 TTKKGYSGVMVLSKVKPLSVEYKMGHSAIDDEGRFVILEYQ---DFYYIGCYIMNAGADL 231

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                  +     +        L+ ++P+I++GD N+     D   P      A FT E 
Sbjct: 232 GRLDLKREHYVKLKKFMGE---LQSKKPVIWSGDLNVAHTEIDLARPATNTKSAGFTPEE 288

Query: 180 R-QSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
           R      L ++   D+ R  H T   +YS++ +  +S + N G R+D+ ++S      + 
Sbjct: 289 REDFGNLLTDLDMVDSFRLKHPTATGMYSYYSFRHNSRANNVGWRLDYFVVSKALQDDII 348

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLD 262
            A I ++  G    SDH P+++ L+
Sbjct: 349 EADIRSEIYG---ASDHVPILLLLN 370


>gi|167628004|ref|YP_001678504.1| DNA-(apurinic or apyrimidinic site) lyase [Francisella philomiragia
           subsp. philomiragia ATCC 25017]
 gi|167598005|gb|ABZ88003.1| DNA-(apurinic or apyrimidinic site) lyase [Francisella philomiragia
           subsp. philomiragia ATCC 25017]
          Length = 258

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 59/262 (22%), Positives = 108/262 (41%), Gaps = 13/262 (4%)

Query: 7   ATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQ 62
            T+N N IRA        W    + D +C+QETK +      +         Y  +   +
Sbjct: 1   MTFNANGIRAAARKGFWEWFTTQDVDFLCIQETKAQFHQLEKDEQHFPDGYYYDFKDAVK 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +P++++  L  D  D + R+I+  +        I +LYLP G+     
Sbjct: 61  KGYSGTAIYAKKKPLKVIKELGLDWADDEGRYIQFDYE----NFSIASLYLPSGS-SGDV 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF--TLEVR 180
           + + K+ +++++     ++ E     I  GD+NI+ +  D  N     +        E  
Sbjct: 116 RQEYKMQFLEKYKEILKEQTESGRDFIVCGDFNIVHKEIDIKNWKSNYDKTSGVLPEEQA 175

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
                  ++G+ D  R  +     Y++W     + + N G RID+ + +P     +    
Sbjct: 176 WLDHIFDDLGWVDTFRVINHEPLQYTWWSNRGQARANNVGWRIDYHISTPALKDKVVPES 235

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
                      SDH P+ +S D
Sbjct: 236 --DYVYKENWFSDHAPLTISYD 255


>gi|297625750|ref|YP_003687513.1| Exodeoxyribonuclease III/exonuclease III [Propionibacterium
           freudenreichii subsp. shermanii CIRM-BIA1]
 gi|296921515|emb|CBL56069.1| Exodeoxyribonuclease III/exonuclease III [Propionibacterium
           freudenreichii subsp. shermanii CIRM-BIA1]
          Length = 313

 Score =  148 bits (372), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 58/313 (18%), Positives = 99/313 (31%), Gaps = 52/313 (16%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++ +AT+NVN IRA        W +   PD+ CLQE +   +  P E     +   +   
Sbjct: 1   MLRLATYNVNGIRAAQRRGFTGWKQRCLPDVACLQEVRCPYEALPMEAFAGFHVAYDAGE 60

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLD---------------------------VQARF 94
            K  NGVA+LS+     +                                          
Sbjct: 61  LKGRNGVAVLSRTPFDAVRVWSDQAMFISPAGDARMAGADELSVPDYPLARPLRSFNHEG 120

Query: 95  IEATFTINTQTLRIGNLYLPHGN----------------------PITSTKYDDKISWIK 132
                 +  Q L +  +Y+P G+                           K      + +
Sbjct: 121 RYVEVDLADQPLTVACVYVPKGDSLLAPGIRSRDPLTDEQLAGVQRRYDRKMAFLAGFSR 180

Query: 133 RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192
              R            +  GD+NI     D  N    +  + F  E R    +  +    
Sbjct: 181 HLTRARRAAHAAGREFLVVGDFNIAHTRLDVKNWRPAQKASGFLPEERAWLSEQLSPRTL 240

Query: 193 DAIRA--THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
             +      D    YS+W +   +++++ G RID+ + SP+       A +D       +
Sbjct: 241 VDVVRAAHPDQDGPYSWWSWMGQAFARDTGWRIDYHLASPQLARRSARAFVDRDHGADER 300

Query: 251 PSDHTPVIVSLDI 263
            SDH  V+V  D+
Sbjct: 301 VSDHAAVVVDYDL 313


>gi|297571824|ref|YP_003697598.1| exodeoxyribonuclease III Xth [Arcanobacterium haemolyticum DSM
           20595]
 gi|296932171|gb|ADH92979.1| exodeoxyribonuclease III Xth [Arcanobacterium haemolyticum DSM
           20595]
          Length = 290

 Score =  148 bits (372), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 63/287 (21%), Positives = 99/287 (34%), Gaps = 27/287 (9%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + VAT NVN IRA +      WI   +PD++ LQE +  ++  P    ++     + C  
Sbjct: 1   MLVATCNVNGIRAAVRKGFHEWIAVVSPDVLLLQEVRAPEELVPELIGENYTVIQQACDI 60

Query: 63  KSYNGVAI---------------------LSKYQPIEIVTHLPGDDLDVQARFIEATFTI 101
           K   GVAI                                  P +      R+IE     
Sbjct: 61  KGRAGVAIAVKKGVDVGRISIGLGSDLPDCEPDTDALASWDRPAEPPVDTGRWIEVDIPA 120

Query: 102 NTQTLRIGNLYLPHGNPITSTK--YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159
              T     L+             Y        R  +  + R E    ++ AGD+NI+  
Sbjct: 121 YKTTFVSAYLHSGTATDQAKMDAKYAHLDRVTTRLAQLRTNRSEELPHILVAGDFNIVHT 180

Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH---DTHHLYSFWDYYADSWS 216
             D  N     N     L+   ++               +   D    Y++W     ++ 
Sbjct: 181 ERDITNWKSNHNKTAGVLDPEIAYVDKWTETMGYIDVQRYLIGDEQAEYTWWSQRGKAFD 240

Query: 217 KNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            N G RID+ ++ P+     HS RID       + SDH P+IV+ D+
Sbjct: 241 NNVGWRIDYHLVDPDLAQRAHSLRIDRAESYDQRWSDHAPLIVTYDV 287


>gi|312602232|ref|YP_004022077.1| ATP-dependent DNA ligase [Burkholderia rhizoxinica HKI 454]
 gi|312169546|emb|CBW76558.1| ATP-dependent DNA ligase (EC 6.5.1.1) [Burkholderia rhizoxinica HKI
           454]
          Length = 1123

 Score =  147 bits (370), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 75/237 (31%), Positives = 123/237 (51%), Gaps = 3/237 (1%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSY 65
           +A +N+N +RAR+  L  W++   PD++CLQE KT D+ FP   L+   Y     GQ ++
Sbjct: 11  IAIFNINGLRARLGQLLEWLEHEGPDVVCLQELKTPDERFPASDLERAGYGALWRGQAAW 70

Query: 66  NGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYD 125
           +GV IL++ +    V          +         ++   L I +LYLP+ NP    K+D
Sbjct: 71  SGVTILARGEQPRAVRR---ALPGFETDTHNRYLEVSVAGLLIASLYLPNDNPQPGPKFD 127

Query: 126 DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQK 185
            K++W  + +  A+  +    P++ AG+YN++    D YNP  W  DA    + RQ + +
Sbjct: 128 YKLAWFDKLIEHAATMVNDSRPVVLAGNYNVVLTDEDIYNPRSWLKDALLQPQSRQRYAQ 187

Query: 186 LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           L   G+TDA R  H     Y+FWD +   W  + G+RI+H++L+      L +A +D
Sbjct: 188 LLAQGWTDARRVLHPDKRNYTFWDDFRQHWQTHSGLRIEHLLLNRALAPALTAAEVD 244


>gi|254472466|ref|ZP_05085866.1| exodeoxyribonuclease III protein [Pseudovibrio sp. JE062]
 gi|211958749|gb|EEA93949.1| exodeoxyribonuclease III protein [Pseudovibrio sp. JE062]
          Length = 243

 Score =  146 bits (369), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 72/243 (29%), Positives = 114/243 (46%), Gaps = 7/243 (2%)

Query: 25  IKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKSYNGVAILSKYQPIEIVTHL 83
           + ++ PD++CLQETK  D +FP   +  L Y ++E  GQK Y+GVA+LS+     +    
Sbjct: 2   LLDHAPDVLCLQETKCPDGSFPSAAINKLGYRYVEVHGQKGYHGVALLSRVPLENVERKE 61

Query: 84  PGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRF-LRFASQRL 142
             +      R I A    N   +RI N Y+P G  +   + +DK +   +F     S   
Sbjct: 62  FCEMG--DTRHIAADVAFNGGKVRIHNFYVPAGGDVPDPEVNDKFAHKLKFLDEMESWFK 119

Query: 143 ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVRQSFQKLQNMGFTDAIRATHDT 201
             +   I  GD NI P  +D ++          T  E ++     +   + D +R     
Sbjct: 120 GFDGQSIVVGDLNIAPYENDVWSHKQLIKVVSHTPLECQRLEDVREAGNYVDTMRKHMPM 179

Query: 202 H-HLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
              +Y++W Y A  W + +KG R+DH+ ++PE        +I    RGW KPSDH PV+ 
Sbjct: 180 DQKIYTWWSYRAKDWSASDKGRRLDHVWMTPETAQHTKDVQIMRDARGWEKPSDHAPVMA 239

Query: 260 SLD 262
            L+
Sbjct: 240 VLE 242


>gi|283782977|ref|YP_003373731.1| putative exodeoxyribonuclease III [Gardnerella vaginalis 409-05]
 gi|283441148|gb|ADB13614.1| putative exodeoxyribonuclease III [Gardnerella vaginalis 409-05]
          Length = 288

 Score =  146 bits (369), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 64/288 (22%), Positives = 102/288 (35%), Gaps = 27/288 (9%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNF-PFETLQSLNYHI--- 57
           ++T+ T N+N IRA     +  W   + PD+ C+QE +       P  T   + Y     
Sbjct: 1   MITITTSNLNGIRAAERKGMLNWSDAHTPDVWCMQEVRAPQDAIDPIMTKIEMGYRTSEN 60

Query: 58  --------------ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR--FIEATFTI 101
                         E C  K   GVA+++    +E    LPG + DV +         T 
Sbjct: 61  IVNSIKNDNFTYTNEVCRVKGRAGVALVTSLPVVEKRYGLPGLNEDVDSGRWVETDVRTP 120

Query: 102 NTQTLRIGNLYLPHGNPIT----STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII 157
               + I ++Y+  GN         K+    + + R     +         I  GD+NI 
Sbjct: 121 EGYEITIASVYVHAGNVDDPQKMQQKFRFLDTMLIRLGELRNIAASGGNQAILCGDFNIA 180

Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSW 215
               D  N    E  A F  E R    +  N      +      D    Y++W     ++
Sbjct: 181 HTSLDIKNAKANEKSAGFLPEERAYIDRWINEYEFVDVMRMLAGDIQGPYTWWSQRGKAF 240

Query: 216 SKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             N G R+D+   +PE         ID       + SDH P+ +  D+
Sbjct: 241 DNNVGWRLDYQFATPEIAESARGFVIDRAESYDARWSDHAPLSIKYDV 288


>gi|298345296|ref|YP_003717983.1| putative exodeoxyribonuclease III [Mobiluncus curtisii ATCC 43063]
 gi|315655715|ref|ZP_07908613.1| exodeoxyribonuclease III [Mobiluncus curtisii ATCC 51333]
 gi|298235357|gb|ADI66489.1| possible exodeoxyribonuclease III [Mobiluncus curtisii ATCC 43063]
 gi|315489779|gb|EFU79406.1| exodeoxyribonuclease III [Mobiluncus curtisii ATCC 51333]
          Length = 294

 Score =  146 bits (368), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 51/294 (17%), Positives = 97/294 (32%), Gaps = 32/294 (10%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + V T NVN +RA        W++ ++ D++CLQE +   ++       + + H+ +C  
Sbjct: 1   MKVTTVNVNGVRAAFRKGFGDWLENDDSDLLCLQEVRATPQDTQDLFGPAWDVHVWSCRV 60

Query: 63  KSYNGVAILSKYQPIE----------------IVTHLPGDDLDVQARFIEATFTINTQTL 106
           K   GVA+ ++                     +      D        I          +
Sbjct: 61  KGRAGVALGARRDSDWEIGQLTEGLPPDLYAEVGGEPDVDSGRWLEAAIHGPQGTTFTLV 120

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRL-----ELEEPLIFAGDYNIIPQPH 161
                           K        +R  + +++ +     +  +  +  GD+NI+    
Sbjct: 121 SAYLHSGELRTEKQKQKIAYLHRVGERVQQLSARAMAGVGSDTPQEALICGDFNIVRTAR 180

Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNM----------GFTDAIRATHDTHHLYSFWDYY 211
           D  N     N     ++   +F                          DT   Y++W + 
Sbjct: 181 DIKNWKSNHNKTSGVMDEEIAFLDAWMADTLSGSKGLPCVDVGRALVGDTDGPYTWWSWR 240

Query: 212 ADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
             ++  N G R+D+ M +P       SA +   P    + +DH PV V+ D P 
Sbjct: 241 GKAYDNNAGWRLDYHMATPGLAGQAQSAAVYRAPAYDARFTDHAPVTVTYDFPA 294


>gi|311276364|ref|XP_003135157.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase 2-like [Sus
           scrofa]
          Length = 515

 Score =  146 bits (368), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 58/334 (17%), Positives = 106/334 (31%), Gaps = 60/334 (17%)

Query: 3   VVTVATWNVNSIRARIHN-------------LAAWIKENNPDIICLQETKTEDKNF--PF 47
           ++ V +WN+N IR+ +               +   + + + DI+CLQETK        P 
Sbjct: 1   MLRVVSWNINGIRSHLQGAGYEEPSNCTARAVGRILDKLDADIVCLQETKVTRDVLTEPL 60

Query: 48  ETLQSLN-YHIETCGQKSYNGVAILSKYQPIEI------------------VTHLPGDDL 88
             ++  N Y   +  +  Y+GVA   K     +                        +  
Sbjct: 61  AIIEGYNSYFSFSRNRSGYSGVATFCKDSATPVAAEEGLSGLLATLNGDVNCYGNMDEFT 120

Query: 89  DVQ------------ARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
             +             +    T   + ++L + N+Y PH +P    +   K+ +      
Sbjct: 121 QEELRALDSEGRALLTQHKIRTQDGDEKSLTVINVYCPHADPGKPERLTFKMRFYHLLQI 180

Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYN----PIIWENDACFTLEVRQSFQKLQNMGFT 192
            A   L     +I  GD N   +P D ++        E+     ++   S  + Q     
Sbjct: 181 RAEALLAAGSHVIILGDLNTAHRPIDHWDAVNLECFEEDPGRKWMDGLLSNLRCQAGSHM 240

Query: 193 DAIR-----ATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA-TSLLHSARIDTKPR 246
                            ++ W     +   N G RID+++           S+ +  +  
Sbjct: 241 GPFIDSYRYFQPKQKGAFTCWSTVTGARHLNYGSRIDYVLGDRALVMDTFQSSFVLPEVM 300

Query: 247 GWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
           G    SDH PV   L++     KQ         P
Sbjct: 301 G----SDHCPVGAVLNVSPVPAKQCPPLCTRFLP 330


>gi|298253361|ref|ZP_06977153.1| exonuclease III [Gardnerella vaginalis 5-1]
 gi|297532756|gb|EFH71642.1| exonuclease III [Gardnerella vaginalis 5-1]
          Length = 288

 Score =  146 bits (368), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 64/288 (22%), Positives = 101/288 (35%), Gaps = 27/288 (9%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNF-PFETLQSLNYHI--- 57
           ++T+ T N+N IRA     +  W   + PD+ C+QE +       P  T   + Y     
Sbjct: 1   MITITTSNLNGIRAAERKGMLNWSDAHTPDVWCMQEVRAPQDAIDPIMTKIEMGYRTSEN 60

Query: 58  --------------ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR--FIEATFTI 101
                         E C  K   GVA+++    +E    LPG   DV +         T 
Sbjct: 61  IVNSIKNDNFTYTNEVCRVKGRAGVALVTSLPVVEKRYGLPGLSEDVDSGRWVETDVRTP 120

Query: 102 NTQTLRIGNLYLPHGNPIT----STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII 157
               + I ++Y+  GN         K+    + + R     +         I  GD+NI 
Sbjct: 121 EGYEITIASVYVHAGNVDDPQKMQQKFRFLDTMLIRLGELRNIAASGGNQAILCGDFNIA 180

Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSW 215
               D  N    E  A F  E R    +  N      +      D    Y++W     ++
Sbjct: 181 HTSLDIKNAKANEKSAGFLPEERAYIDRWINEYEFVDVMRMLAGDIQGPYTWWSQRGKAF 240

Query: 216 SKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             N G R+D+   +PE         ID       + SDH P+ +  D+
Sbjct: 241 DNNVGWRLDYQFATPEIAESARGFVIDRAESYDARWSDHAPLSIKYDV 288


>gi|290559315|gb|EFD92650.1| exodeoxyribonuclease III [Candidatus Parvarchaeum acidophilus
           ARMAN-5]
          Length = 251

 Score =  146 bits (368), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 65/263 (24%), Positives = 113/263 (42%), Gaps = 16/263 (6%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDI---ICLQETKTEDKNFPFETLQSLNYHIETC 60
           + + +WNVN +++ I       KE   DI   I +QETKT ++           Y+I   
Sbjct: 1   MKIMSWNVNGLKSVIRK-NEIQKELESDIYGAILIQETKT-NEIIDTLGKDYFKYYISAT 58

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GV   SK +P+ ++  +  +  D + R +   F        I   +      ++
Sbjct: 59  SKKGYSGVMTFSKNKPLNVIYGIKNEQFDREGRTLTLEFK---DYFLINAYFPNSRRDLS 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
              Y  K     + +    Q L  ++P+I  GD+N+     D   P   + +A FT   R
Sbjct: 116 RLDYKIKF---NKSILKFMQALRRKKPVIIGGDFNVAHNEIDIARPKSNQGNAGFTSVER 172

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD-SWSKNKGIRIDHIMLSPEATSLLHSA 239
           +   ++   G+ D  R  +  +  Y++W Y    + + N G RID++ +S E    +  A
Sbjct: 173 KFIDEMIKKGYIDTFRIFNKENGNYTWWTYLYKSARTNNIGWRIDYLFVSNELKKRVKDA 232

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
            I     G    SDH PV + L+
Sbjct: 233 GIIKNKIG----SDHAPVYIELN 251


>gi|297242738|ref|ZP_06926676.1| exonuclease III [Gardnerella vaginalis AMD]
 gi|296888949|gb|EFH27683.1| exonuclease III [Gardnerella vaginalis AMD]
          Length = 288

 Score =  146 bits (368), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 64/288 (22%), Positives = 101/288 (35%), Gaps = 27/288 (9%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNF-PFETLQSLNYHI--- 57
           ++T+ T N+N IRA     +  W   + PD+ C+QE +       P  T   + Y     
Sbjct: 1   MITITTSNLNGIRAAERKGMLNWSDAHTPDVWCMQEVRAPQDAIDPIMTKIEMGYRTSEN 60

Query: 58  --------------ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR--FIEATFTI 101
                         E C  K   GVA+++    +E    LPG   DV +         T 
Sbjct: 61  IVNSIKNDNFTYTNEVCRVKGRAGVALVTSLPVVEKRYGLPGLSEDVDSGRWVETDVRTP 120

Query: 102 NTQTLRIGNLYLPHGNPITSTK----YDDKISWIKRFLRFASQRLELEEPLIFAGDYNII 157
           +   + I ++Y+  GN     K    +    + + R               I  GD+NI 
Sbjct: 121 DGYEITIASVYVHAGNVDDPQKMKQKFRFLDTMLTRLGELRDAAASGGNQAILCGDFNIA 180

Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSW 215
               D  N    E  A F  E R    +  N      +      D    Y++W     ++
Sbjct: 181 HTSLDIKNAKANEKSAGFLPEERAYIDRWINEYEFVDVMRMLAGDIQGPYTWWSQRGKAF 240

Query: 216 SKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             N G R+D+   +PE         ID       + SDH P+ +  D+
Sbjct: 241 DNNVGWRLDYQFATPEIAESARGFVIDRAESYDARWSDHAPLSIKYDV 288


>gi|227489312|ref|ZP_03919628.1| possible exodeoxyribonuclease III, exonuclease III [Corynebacterium
           glucuronolyticum ATCC 51867]
 gi|227090685|gb|EEI25997.1| possible exodeoxyribonuclease III, exonuclease III [Corynebacterium
           glucuronolyticum ATCC 51867]
          Length = 233

 Score =  146 bits (367), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 70/259 (27%), Positives = 114/259 (44%), Gaps = 26/259 (10%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS RAR   +   +  ++ D++ LQETK ++  FP        Y +   G  
Sbjct: 1   MRIATWNVNSARARFGRITELLARHDIDVLALQETKIKE--FP----PVKGYEVAHVGYN 54

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVAILS+    ++ T   G       +   A   +     RI ++Y+P+G  +    
Sbjct: 55  QWNGVAILSRVGLKDVQTSFTGQPDYEGKKEGRAISAVCGGK-RIWSIYVPNGRAVDHPH 113

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           YD K+ ++  F R+A+         +  GD+N+IP P D Y+   +E       E     
Sbjct: 114 YDYKLRFLYNFARYAAPGA-----DLAMGDFNVIPGPEDVYDESPFETHVT-EPERAAFE 167

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
                +               Y++WDY A  + +++G+RID  + +        S  +D 
Sbjct: 168 YLTDVLPVVS--------PTGYTYWDYQARRFDRDQGMRIDFHLSTTP----ATSGFVDR 215

Query: 244 KPRGWTKPSDHTPVIVSLD 262
             R   K SDH PVI   +
Sbjct: 216 AERAA-KSSDHAPVICEYE 233


>gi|296395160|ref|YP_003660044.1| exodeoxyribonuclease III Xth [Segniliparus rotundus DSM 44985]
 gi|296182307|gb|ADG99213.1| exodeoxyribonuclease III Xth [Segniliparus rotundus DSM 44985]
          Length = 267

 Score =  146 bits (367), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 58/269 (21%), Positives = 92/269 (34%), Gaps = 19/269 (7%)

Query: 7   ATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTED----KNFPFETLQSLNY 55
           AT NVN +RA +         L  W+     D +CLQE +  +                 
Sbjct: 2   ATVNVNGVRAAVKARSAANTGLLGWLSAAPADYVCLQEVRATEPETRAALAPALADGWTL 61

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
                 QK  +GVAILS+ +P  +             R+IEA F      L + +LYLP 
Sbjct: 62  VQAPAAQKGRSGVAILSRREPDAVRIGHGDPQFAESGRYIEADFG----KLTLASLYLPS 117

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
           G   T  + +        F  +       +  ++  GD+NI     D  N       + F
Sbjct: 118 GEAQTERQVEKDQFLTT-FGEYLKPLAHAKRDVLICGDWNIAHTELDIKNWKGNLKASGF 176

Query: 176 TLEVRQSFQKLQN---MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
               R    ++                     YS+W Y   ++  + G RID+ + +   
Sbjct: 177 LPHERAWIGEVFADGSGWTDVQRAFHPGEAGPYSWWSYRGQAFDNDAGWRIDYHVANKPL 236

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
            +    A          + SDH P++V  
Sbjct: 237 AARAVKAVTQRAEHYELRWSDHAPIVVEY 265


>gi|304390853|ref|ZP_07372805.1| exodeoxyribonuclease III [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
 gi|304325736|gb|EFL92982.1| exodeoxyribonuclease III [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
          Length = 294

 Score =  146 bits (367), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 55/294 (18%), Positives = 105/294 (35%), Gaps = 32/294 (10%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + V T NVN +RA        W++ ++ D++CLQE +   ++       + + H+  C  
Sbjct: 1   MKVTTVNVNGVRAAFRKGFGDWLENDDSDLLCLQEVRATPQDTQDLFGPAWDVHVWPCRV 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG------ 116
           K   GVA+ ++      +  L           +     +++       ++ P G      
Sbjct: 61  KGRAGVALGARRDSDWEIGQLTEGLPPDLYAEVGGEPDVDSGRWLEAAIHGPQGTTFTLV 120

Query: 117 ------NPITSTKYDDKISWIKRFLRFASQ---------RLELEEPLIFAGDYNIIPQPH 161
                   + + K + KI+++ R      Q           +  +  +  GD+NI+    
Sbjct: 121 SAYLHSGELRTEKQEQKIAYLHRVGERVQQLSARAIAGVGSDTPQEALICGDFNIVRTAR 180

Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNM----------GFTDAIRATHDTHHLYSFWDYY 211
           D  N     N     ++   +F                          DT   Y++W + 
Sbjct: 181 DIKNWKPNHNKTSGVMDEEIAFLDAWMADTLSGSKGLPCVDVGRALVGDTDGPYTWWSWR 240

Query: 212 ADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
             ++  N G R+D+ M +P       SA +   P    + +DH PV V+ D P 
Sbjct: 241 GKAYDNNAGWRLDYHMATPGLAGQAQSAAVYRAPAYDARFTDHAPVTVTYDFPA 294


>gi|121603084|ref|YP_980413.1| exodeoxyribonuclease III Xth [Polaromonas naphthalenivorans CJ2]
 gi|120592053|gb|ABM35492.1| exodeoxyribonuclease III Xth [Polaromonas naphthalenivorans CJ2]
          Length = 319

 Score =  145 bits (366), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 67/321 (20%), Positives = 118/321 (36%), Gaps = 64/321 (19%)

Query: 3   VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFP--FETLQSLNYHIET 59
           +  + + N+N IR A    L  W+ ++ PD IC+QE K +  +    FE +     + + 
Sbjct: 1   MFKLTSLNLNGIRSAASKGLQEWVAQSMPDCICVQELKAQAADLSGRFEAIAGHKGYFQF 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT----LRIGNLYLPH 115
             +K Y+GV I ++++P +++      + D + R++E  F    +     L I + Y P 
Sbjct: 61  AEKKGYSGVGIYTRHEPSDVIVGYGSTEFDAEGRYVELRFDRPGRRHSPKLSIISCYFPS 120

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIF--AGDYNIIPQPHDCYNPIIWENDA 173
           G+     +        + +   A+ +    +   F   GD NI  Q  D  N    + ++
Sbjct: 121 GSSGEERQAAKFRFLAELYPHLAALKRCGGDNREFVLCGDINIAHQEIDLKNFKGNKKNS 180

Query: 174 CFTLEVRQSFQK------------------------------------------------ 185
            F  E R    +                                                
Sbjct: 181 GFLPEERAWMTELLAPTLPTACGSLPPEGAAAPAARQSRLRGPGLQEASAAVDAAPALDS 240

Query: 186 -LQNMGFTDAIRATHD--THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
             Q  G  D  R  H   T   Y++W     +++KN G R+D+ + +P   +  HSA I 
Sbjct: 241 SAQGGGMVDVYRRLHPATTDEAYTWWSNRGQAYAKNVGWRLDYHLATPGFGATAHSASIH 300

Query: 243 TKPRGWTKPSDHTPVIVSLDI 263
              R     SDH P+ +  D 
Sbjct: 301 KAQR----FSDHAPLTIEYDW 317


>gi|226359829|ref|YP_002777607.1| exodeoxyribonuclease [Rhodococcus opacus B4]
 gi|226238314|dbj|BAH48662.1| putative exodeoxyribonuclease [Rhodococcus opacus B4]
          Length = 304

 Score =  145 bits (366), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 57/303 (18%), Positives = 101/303 (33%), Gaps = 44/303 (14%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + +AT+N+N IRA        W+ +  PD++ LQE +      P       +   +    
Sbjct: 1   MRIATFNINGIRAAQRRGFEEWLGDRAPDVVSLQEVRARAAAIPSGVFGRYHLAYDEGEF 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLD-----------------------VQARFIEATF 99
              NGVAIL+++ P+ + T      +                                  
Sbjct: 61  AGRNGVAILTRHAPLAVRTWSGTALVQAPGETHLERVELDPQPLARGLGEFANHGRYIEV 120

Query: 100 TINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL--------------- 144
            +    + + ++YLP G      +   ++           +++                 
Sbjct: 121 DLADAPITVVSMYLPKGGLPAHLQKPGRMRDAPDGGARYDRKMRFLSAFARQLTRSRRTA 180

Query: 145 ---EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT 201
                 L+  GD NI    HD  N         +  E R+ F  + +      +   H  
Sbjct: 181 RARGRELLLMGDLNIAHTRHDVRNWRRSNQAEGYLPEEREWFDSIVSPRTLVDVVRRHHP 240

Query: 202 --HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
                YS+W +   S+  + G RID+ + +P       +A  D  P    + SDH PV+V
Sbjct: 241 GVDGPYSWWSWLGQSFVNDVGWRIDYHLATPHLARAAVTAGTDRDPAADRRMSDHAPVVV 300

Query: 260 SLD 262
             D
Sbjct: 301 DYD 303


>gi|58337957|ref|YP_194542.1| exodeoxyribonuclease [Lactobacillus acidophilus NCFM]
 gi|227902875|ref|ZP_04020680.1| exodeoxyribonuclease [Lactobacillus acidophilus ATCC 4796]
 gi|58255274|gb|AAV43511.1| exodeoxyribonuclease [Lactobacillus acidophilus NCFM]
 gi|227869391|gb|EEJ76812.1| exodeoxyribonuclease [Lactobacillus acidophilus ATCC 4796]
          Length = 253

 Score =  145 bits (366), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 61/261 (23%), Positives = 108/261 (41%), Gaps = 12/261 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN  R  + H       + +PDI  +Q+T+   K    +  +   Y      +
Sbjct: 1   MKFVSWNVNGFRRCLRHGFLDTFLDLDPDIFGMQDTRLSPKEVKIDLTEYYQY-WNFSEE 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G A+ +K +P+ +   +   + D + R I   F        +       G  +   
Sbjct: 60  KRYDGAAVFTKIKPLAVYNGIGIPEFDREGRTITLEFPKFY---YVNTFAPYAGEQLQRL 116

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
            +    +   R        L   +P+I  GD ++     D   P   +N A FT + R+ 
Sbjct: 117 DFRVMWAQAFRNYVTK---LANNKPVIIGGDMSVAHDEIDLAEPEKNKNHAGFTGDERKE 173

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F +L N GF D  R  H     Y++W  + ++  KN G R+D+ ++S   T  +  + I 
Sbjct: 174 FTELLNAGFEDTFRTLHPKDEAYTYWSRHDNARDKNIGERLDYFLVSHALTDKVEGSDIL 233

Query: 243 TKPRGWTKPSDHTPVIVSLDI 263
                    SDH P+ +++DI
Sbjct: 234 NNIDE----SDHCPIELNMDI 250


>gi|227540901|ref|ZP_03970950.1| possible exodeoxyribonuclease III [Corynebacterium glucuronolyticum
           ATCC 51866]
 gi|227183161|gb|EEI64133.1| possible exodeoxyribonuclease III [Corynebacterium glucuronolyticum
           ATCC 51866]
          Length = 233

 Score =  145 bits (366), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 71/259 (27%), Positives = 113/259 (43%), Gaps = 26/259 (10%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNS RAR   +   +  ++ D++ LQETK ++  FP        Y +   G  
Sbjct: 1   MRIATWNVNSARARFGRITELLARHDIDVLALQETKIKE--FP----PVKGYEVAHVGYN 54

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGVAILS+    ++ T   G       +   A   +     RI NLY+P+G  +    
Sbjct: 55  QWNGVAILSRVGLKDVQTSFTGQPDYEGKKEGRAISAVCGGK-RIWNLYVPNGRAVDHPH 113

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           YD K+ ++  F R+A+         +  GD+N+IP   D Y+   +E       E     
Sbjct: 114 YDYKLRFLYNFARYAAPSA-----DLAMGDFNVIPGAEDVYDESPFETHVT-EPERAAFE 167

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
                +               Y++WDY A  + +++G+RID  + +        S  +D 
Sbjct: 168 YLTDVLPVVS--------PTGYTYWDYQARRFDRDQGMRIDFHLSTTP----ATSGFVDR 215

Query: 244 KPRGWTKPSDHTPVIVSLD 262
             R   K SDH PVI   +
Sbjct: 216 AERAA-KSSDHAPVICEYE 233


>gi|315656371|ref|ZP_07909260.1| exodeoxyribonuclease III [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
 gi|315492930|gb|EFU82532.1| exodeoxyribonuclease III [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
          Length = 294

 Score =  145 bits (366), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 51/294 (17%), Positives = 96/294 (32%), Gaps = 32/294 (10%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + V T NVN +RA        W++ ++ D++CLQE +   ++       + + H+  C  
Sbjct: 1   MKVTTVNVNGVRAAFRKGFGDWLENDDSDLLCLQEVRATPQDTQDLFGPAWDVHVWPCRV 60

Query: 63  KSYNGVAILSKYQPIE----------------IVTHLPGDDLDVQARFIEATFTINTQTL 106
           K   GVA+ ++                     +      D        I          +
Sbjct: 61  KGRAGVALGARRDSDWEIGQLTEGLPPDLYAEVGGEPDVDSGRWLEAAIHGPQGTTFTLV 120

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRL-----ELEEPLIFAGDYNIIPQPH 161
                           K        +R  + +++ +     +  +  +  GD+NI+    
Sbjct: 121 SAYLHSGELRTEKQEQKIAYLHRVGERVQQLSARAMAGAGSDTPQEALICGDFNIVRTAR 180

Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNM----------GFTDAIRATHDTHHLYSFWDYY 211
           D  N     N     ++   +F                          DT   Y++W + 
Sbjct: 181 DIKNWKPNHNKTSGVMDEEIAFLDAWMADTLSGSKRLPCVDVGRALAGDTDGPYTWWSWR 240

Query: 212 ADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
             ++  N G R+D+ M +P       SA +   P    + +DH PV V+ D P 
Sbjct: 241 GKAYDNNAGWRLDYHMATPGLAGQAQSAAVYRAPAYDARFTDHAPVTVTYDFPA 294


>gi|229817407|ref|ZP_04447689.1| hypothetical protein BIFANG_02669 [Bifidobacterium angulatum DSM
           20098]
 gi|229785196|gb|EEP21310.1| hypothetical protein BIFANG_02669 [Bifidobacterium angulatum DSM
           20098]
          Length = 297

 Score =  145 bits (366), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 66/286 (23%), Positives = 103/286 (36%), Gaps = 25/286 (8%)

Query: 1   MSVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTE----DKNFPFETLQS--- 52
           MS+ T+ T NVN IRA     +  W  ++ P++ C+QE +      D  F     +    
Sbjct: 12  MSI-TITTSNVNGIRAAKRKGIETWAAQHTPNVWCMQEVRAPQSEIDPIFDEFAFEYTTA 70

Query: 53  --------LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR--FIEATFTIN 102
                   L+   E C  K   GVA+L+          LPG   DV +         T  
Sbjct: 71  GAIDSQDRLDRTNEVCRVKGRAGVALLADLDVTARRYGLPGLTQDVDSGRWIENDITTPA 130

Query: 103 TQTLRIGNLYLPHGNPITS----TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP 158
              L +  +Y+  GN         KY    + + R      +  +     +  GD+NI  
Sbjct: 131 GNLLTVVCVYVHAGNTDDPVKMEQKYRFLDTMLNRMGELRDEAADGGRQALLCGDFNIAH 190

Query: 159 QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSWS 216
              D  N    E  A F  E R    +         +      D    Y++W     ++ 
Sbjct: 191 TSADIKNAKANEKHAGFLPEERAYVDRWLGEYGFVDVTRRLAGDIQGPYTWWSQRGRAFD 250

Query: 217 KNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
            N G R+D+   +P       S  ID  P   T+ SDH P+ ++ +
Sbjct: 251 NNVGWRLDYQFATPALAETAVSFDIDKAPSYDTRWSDHAPLTITYE 296


>gi|83595869|gb|ABC25231.1| catabolite repression control protein PA5332 [uncultured marine
           bacterium Ant4D3]
          Length = 257

 Score =  145 bits (365), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 65/262 (24%), Positives = 115/262 (43%), Gaps = 13/262 (4%)

Query: 4   VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC-- 60
           + V T NV  +R A    L  W+   + D++CLQ+ + +D            +H+     
Sbjct: 1   MRVITLNVQGLRQAAERGLFDWMVTQDADVVCLQDIREKDYQLDEPLFHPEGWHVYFFDA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +  Y G AI S++QP  I+T L     D + RFI+A F      + I ++ +P G    
Sbjct: 61  FEDGYGGTAIYSRHQPKAIMTGLGFSGCDFEGRFIQADFE----KISIASISVPSG-LGD 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             K D K  ++ +F     + L      IF G  N   +P D     + + ++ F  E R
Sbjct: 116 DDKQDAKNEFMDQFSNHLRKTLRKRRDFIFCGTINTAHKPEDLSGWYVNQKNSGFLPEER 175

Query: 181 Q-SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
               +    + F DA R  +     +++W  Y  ++  N+G R+D+ + +P     + +A
Sbjct: 176 DVLDEIFFQLEFCDAFRQVNQNERQFTWWPDYNRAFKLNEGARLDYQITTPNLRRNVRNA 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261
            I  + R     S+H+P+I+  
Sbjct: 236 GIYREQR----FSNHSPLIIDY 253


>gi|326384660|ref|ZP_08206338.1| exodeoxyribonuclease III [Gordonia neofelifaecis NRRL B-59395]
 gi|326196627|gb|EGD53823.1| exodeoxyribonuclease III [Gordonia neofelifaecis NRRL B-59395]
          Length = 291

 Score =  145 bits (365), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 60/285 (21%), Positives = 104/285 (36%), Gaps = 28/285 (9%)

Query: 4   VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +TV ++NVN IRA R     +W+ E +PD++ LQE +   +              +T   
Sbjct: 6   LTVVSFNVNGIRAARRRGFDSWLAERSPDVVGLQELRCPPEEV--GEFDGYTASFDTGSI 63

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDD-----LDVQARFIEATFTINTQTLRIGNLYLPHGN 117
              NGVAIL+K  P  + T +          +  +        ++ + + +  LYLP G 
Sbjct: 64  PGRNGVAILTKSPPTAVRTWVTDPPKARGLREYASHGRYIEVDLSDEPVTVACLYLPKGG 123

Query: 118 PITSTKYDDKISWIKRFLRFASQRLEL------------------EEPLIFAGDYNIIPQ 159
                +    I           +++                        +  GD NI   
Sbjct: 124 LPADLQRPGNIREKPDGGAKHLRKMTFLSGFARELDRNRLAARRAGREFLLIGDLNIAHL 183

Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA--THDTHHLYSFWDYYADSWSK 217
            HD  N         F    R+   +  +      +      D     ++W +  +S++K
Sbjct: 184 EHDVTNWRPARKMEGFLPMEREWLGEQLSPRRLIDVVRVLHGDRPGPLTWWSWAGESFTK 243

Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
           + G RIDH + SP   +      +D +P    + SDH P++V  D
Sbjct: 244 DVGWRIDHQLASPGLAARARWTEVDKEPSPDVRLSDHAPLVVGYD 288


>gi|296130335|ref|YP_003637585.1| exodeoxyribonuclease III Xth [Cellulomonas flavigena DSM 20109]
 gi|296022150|gb|ADG75386.1| exodeoxyribonuclease III Xth [Cellulomonas flavigena DSM 20109]
          Length = 276

 Score =  145 bits (365), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 60/271 (22%), Positives = 105/271 (38%), Gaps = 11/271 (4%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC- 60
           V+TVA+ NVN IRA     +  W+    PD++ LQE +  D+    + L    +H+    
Sbjct: 7   VLTVASVNVNGIRAAFRRGMGEWLDVRKPDVLLLQEVRGSDE-ILADHLPPDGWHLAHEA 65

Query: 61  -GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL-----YLP 114
              K   GVAI S+     +   L         R++EA   +  +  R            
Sbjct: 66  GNAKGRAGVAIASRLPMSAVRVGLGTGVTGDAGRWVEADLEVPAEDGRPATTLTVVSAYL 125

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
           H   + +   D+K +++       +         + AGD NI  +  D  N       A 
Sbjct: 126 HSGTVGTPSMDEKYAFLAHVTDRLAAIAAAGGRAVVAGDLNIAHREVDIKNWKGNLTKAG 185

Query: 175 FTLEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
           F  E R    +  +      +           Y++W +   ++  + G RID+ + +P  
Sbjct: 186 FLPEERAYLDRWFDELGWRDLGRDLAGPGPGPYTWWSWRGKAFDNDAGWRIDYQLATPAL 245

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            +L  +A +D       + SDH P++V  D+
Sbjct: 246 AALARTATVDRAATYDARFSDHAPLVVEYDL 276


>gi|226355160|ref|YP_002784900.1| exodeoxyribonuclease III [Deinococcus deserti VCD115]
 gi|226317150|gb|ACO45146.1| putative exodeoxyribonuclease III [Deinococcus deserti VCD115]
          Length = 260

 Score =  144 bits (364), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 63/262 (24%), Positives = 109/262 (41%), Gaps = 20/262 (7%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETC 60
           + V T NVN +R+ +   L  W+    PD++ LQE +        E LQ L Y       
Sbjct: 12  LKVTTLNVNGLRSALRKGLRDWLLREAPDVLLLQEVRAGPM---PEALQDLGYDGAWFPA 68

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +  Y+GVA+LS++   +I   +    L  +        +   Q +R  ++YLP G+   
Sbjct: 69  QKAGYSGVAVLSRHPLRDIRAGM----LHDEMDAEGRVVSAVVQGVRFVSVYLPSGS-SG 123

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   K   +  +  +    L+ + P++  GDYNI  +  D  N      ++ F    R
Sbjct: 124 ELRQGFKDRILDDYHTWVQALLDEQTPVVIGGDYNIAHREIDLKNWRSNRKNSGFLPHER 183

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           +      + G  D  R        Y++W    ++++ N G RID+ +LS      +    
Sbjct: 184 EWMTAHLSAGLVDCHRNCLGEAAEYTWWSNRGNAYANNVGWRIDY-LLSAGV--QVRGVC 240

Query: 241 IDTKPRGWTKPSDHTPV--IVS 260
           +D + R     SDH P+   V 
Sbjct: 241 VDREAR----LSDHAPLTGWVE 258


>gi|121608588|ref|YP_996395.1| exodeoxyribonuclease III Xth [Verminephrobacter eiseniae EF01-2]
 gi|121553228|gb|ABM57377.1| exodeoxyribonuclease III Xth [Verminephrobacter eiseniae EF01-2]
          Length = 266

 Score =  144 bits (363), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 62/270 (22%), Positives = 111/270 (41%), Gaps = 15/270 (5%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFP--FETLQSLNYHIET 59
           +  + + N+N IR+     L +W+    PD IC+QE K +  +    FE L  L  +   
Sbjct: 1   MFKLTSLNLNGIRSATSRGLESWLAATRPDCICVQEVKAQAADLADRFERLADLQGYFHL 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GV + ++++P + V      + D + R++E  F    + L I + Y P G+  
Sbjct: 61  AEKKGYSGVGVYTRHEPSDRVAGYGSPEFDAEGRYLELRFDTPARKLSIISAYFPSGSSG 120

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +                 RL  E   I  GD NI  Q  D  N    + ++ F  E 
Sbjct: 121 PLRQQA--KFRFLAEFHPHLMRLRAEREFILCGDINIAHQTIDLKNWRSNQKNSGFLPEE 178

Query: 180 RQSFQKLQNMGFTDAIRATHDT------HHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
           R     L ++   + +   +           Y++W     +++ N G R+D+ + +P   
Sbjct: 179 RLWMTNLLDVNDKNGVIDVYRRLQPCATDTAYTWWSNRGRAYANNVGWRLDYHLATPALA 238

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +L  +  I        K SDH P+ V  ++
Sbjct: 239 ALARAQSIYK----GEKFSDHAPITVDYEL 264


>gi|262199576|ref|YP_003270785.1| exodeoxyribonuclease III Xth [Haliangium ochraceum DSM 14365]
 gi|262082923|gb|ACY18892.1| exodeoxyribonuclease III Xth [Haliangium ochraceum DSM 14365]
          Length = 301

 Score =  144 bits (363), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 65/305 (21%), Positives = 110/305 (36%), Gaps = 41/305 (13%)

Query: 1   MSVVTVATWNVNSIRARIH------------------------------NLAAWIKENNP 30
           ++ V V +WNVN +RA                                     WI+  + 
Sbjct: 2   LARVRVVSWNVNGLRAVDRTTPRRASAAASPSPGQVRASTGARAQRGGGRFRRWIERVDA 61

Query: 31  DIICLQETKTEDKNFPFETLQSLNYHIE--TCGQKSYNGVAILSKYQPIEIVTHLPGDDL 88
            I+ +QE +      P   LQ   +H       +  Y+GV + +K  P    T L G D 
Sbjct: 62  TIVGVQEVRARRDALPRRLLQPRGWHAHLVEAERAGYSGVGLYAKLAPDGADTALAGGDF 121

Query: 89  DVQARFIEATF-TINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEP 147
           D + R   A F  ++   +        +G+   +++   K+ + +          +  + 
Sbjct: 122 DREGRLQIAHFGRLSVANVYF---PNGNGSNRDNSRVPFKLDFYRALFDALGALRDAGQR 178

Query: 148 LIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF 207
           ++  GD+N   +  D   P      + F  E R    +    G+ D  R        Y++
Sbjct: 179 VLVMGDFNTAHRDIDLARPKQNRKTSGFLPEERAELDRWVAAGWVDTFRHFEPGPGHYTW 238

Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPR 267
           W   A   ++N G RID++   PEA   + SA +  +  G    SDH P  V LD P   
Sbjct: 239 WSQRAGVRARNIGWRIDYVFACPEAMPFVRSAFLMPQVGG----SDHCPHGVVLD-PAIT 293

Query: 268 KKQQD 272
           +    
Sbjct: 294 RAAPP 298


>gi|10640846|emb|CAC12624.1| probable apurinic/apyrimidinic endonuclease [Thermoplasma
           acidophilum]
          Length = 241

 Score =  144 bits (363), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 60/253 (23%), Positives = 97/253 (38%), Gaps = 14/253 (5%)

Query: 12  NSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAI 70
           N +RA +     +  K+++   I LQETK +  + P E    L Y++     K       
Sbjct: 2   NGLRAAVKNGAVSVFKQDDYFGIALQETKADSTSVPEEMYH-LGYYLYNNPAKKKGYSGT 60

Query: 71  LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISW 130
           +S  +   I     G + +                +   N             +D     
Sbjct: 61  MSLVREKPIDV-SYGFENEEGRILNLEFDKFYFINVYFPNAQHGLTRLDMKLDFD----- 114

Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG 190
                   S  L  ++PLI  GD+N+  +  D   P   EN+A FT + R    K  + G
Sbjct: 115 --EKFLEYSNELRKKKPLIICGDFNVAHEEIDIARPKDNENNAGFTKQERDWMTKFLDSG 172

Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
           + D  R        YS+W Y  ++ +KN G RID+ ++S +    +  A I     G   
Sbjct: 173 YVDTYRIFMKEGGHYSWWSYRFNARAKNIGWRIDYFVVSDDIRDRVKKAEILETVTG--- 229

Query: 251 PSDHTPVIVSLDI 263
            SDH PV + +D+
Sbjct: 230 -SDHAPVTLEVDL 241


>gi|315606039|ref|ZP_07881070.1| exodeoxyribonuclease III [Actinomyces sp. oral taxon 180 str.
           F0310]
 gi|315312321|gb|EFU60407.1| exodeoxyribonuclease III [Actinomyces sp. oral taxon 180 str.
           F0310]
          Length = 275

 Score =  144 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 52/274 (18%), Positives = 93/274 (33%), Gaps = 13/274 (4%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
            +TV + N+N IRA        W+  ++ D++ +QE +  ++       +  +     C 
Sbjct: 2   TLTVTSVNLNGIRAAHKRGFLPWLHASDTDVLLVQEVRAPEEISREIMGEEWDSVWVPCR 61

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-------TINTQTLRIGNLYLP 114
            K   GV +  +     I         D ++      +             +R+ + Y  
Sbjct: 62  IKGRAGVGVAVRRGRARIDGEPRLVLDDAESDVDSGRWLEATVSREGGGVPVRVVSAYFH 121

Query: 115 HGNPITSTK---YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
            G   T  +            R     ++        +  GD+N++    D  N     N
Sbjct: 122 SGEKDTPKQDAKMAHLPRIGNRMAELIAEEANGGVSSLVCGDFNVVRSRCDIKNWTPNHN 181

Query: 172 D--ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
                   E+    + +             DT   YS+W +   ++  N G RID+   +
Sbjct: 182 KRAGVLDEEIAFLNRWVDEGWRDTVRDLAGDTQGPYSWWSWRGQAFVNNAGWRIDYQYAT 241

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           P   +L  S  I   P    + SDH PV V+ DI
Sbjct: 242 PRLGALARSFDIGRAPDYDARFSDHAPVSVTYDI 275


>gi|260907098|ref|ZP_05915420.1| exodeoxyribonuclease III [Brevibacterium linens BL2]
          Length = 251

 Score =  144 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 88/249 (35%), Gaps = 6/249 (2%)

Query: 24  WIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHL 83
           W+    PD I LQE +  +     + L+   Y   +   ++     +    +   +    
Sbjct: 4   WVDTAKPDFITLQEVRAAND-IALKVLEDTGYTTISHDAEAKGRAGVAVMARNEPVEVRE 62

Query: 84  ---PGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQ 140
                   D   R++E  + +   +L        H   + + K +DK  ++ R      +
Sbjct: 63  GLGTDGYFDRAGRWLETDYRLGDGSLLTLVSAYVHSGEVDTPKQEDKYRFLDRMTLRLPE 122

Query: 141 RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT-- 198
             +  + ++  GD N+     D  N       A F  E R  F           +     
Sbjct: 123 LAKQADHVLITGDLNVCHTERDLKNWKANRKKAGFLPEERAYFDGFFGDVGYVDVHRDLS 182

Query: 199 HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVI 258
            D    Y++W     ++  N G RID+ M +P        A +D       + SDH P++
Sbjct: 183 GDVDGPYTWWSMRGQAFDNNAGWRIDYQMATPALAKAAVKATVDKADSWAERWSDHAPLV 242

Query: 259 VSLDIPEPR 267
           +  D+P P+
Sbjct: 243 IDYDLPAPK 251


>gi|183602482|ref|ZP_02963848.1| possible exodeoxyribonuclease [Bifidobacterium animalis subsp.
           lactis HN019]
 gi|183218401|gb|EDT89046.1| possible exodeoxyribonuclease [Bifidobacterium animalis subsp.
           lactis HN019]
          Length = 284

 Score =  144 bits (362), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 59/284 (20%), Positives = 106/284 (37%), Gaps = 24/284 (8%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPF--------------- 47
           +T+ T N+N IRA        W K + P++ C+QET+   +                   
Sbjct: 1   MTITTSNLNGIRAAKRKGFDHWAKAHTPNVWCMQETRAPQEIIADIYGELAADYVHAGKI 60

Query: 48  ETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR--FIEATFTINTQT 105
            + + L+  ++ C  K   GV ++S    +E    LPG + DV +         T     
Sbjct: 61  ASPEELHTLVDVCRIKGRAGVGMISDMPVLETRVGLPGLEEDVDSGRWIEADVRTEQGYV 120

Query: 106 LRIGNLYLPHGNPITS----TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161
           + +  +Y+  G  +       KY    +  +R  +   +        +  GD+NI   P 
Sbjct: 121 ITVVCVYVHAGGLVDDPKEAQKYRFLDTMTERMQQLQDEAASGGRQAVVCGDFNIAHNPI 180

Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNM--GFTDAIRATHDTHHLYSFWDYYADSWSKNK 219
           D  NP   EN+  +    R    K  +             D    Y++W     ++  + 
Sbjct: 181 DLKNPKSNENNNGYFPRERAYMDKWIDQMDYVDVMRDLAGDIQGPYTWWSQRGRAFDNDS 240

Query: 220 GIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           G R+D+   +PE         +D      ++ SDH P+ +S D+
Sbjct: 241 GWRLDYQFATPELAQQARGFVVDRASSYDSRWSDHAPLTISYDV 284


>gi|85700212|gb|ABC74556.1| exonuclease III [Rhizobium leguminosarum bv. trifolii TA1]
          Length = 215

 Score =  143 bits (361), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 116/212 (54%), Positives = 154/212 (72%), Gaps = 1/212 (0%)

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL-RIGN 110
           +L YH+ET GQK +NGVAILSK  P E+   LPGD LD QARF+EA FT++   + R+  
Sbjct: 1   ALGYHVETHGQKGFNGVAILSKSTPFEVNRGLPGDPLDEQARFLEAAFTLSDTRILRVCC 60

Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170
           +YLP+GNP+ + KY  K++W++R   FA++RL  E+ L+ AGDYN+IP+PHDC++P +WE
Sbjct: 61  IYLPNGNPVETEKYPYKLAWMERLRTFAAERLAYEDMLVLAGDYNVIPEPHDCFDPKVWE 120

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230
           NDA F  + R++F+KL+N+G TDA+RAT D    YSFWDY A +W KN GIRIDH++LSP
Sbjct: 121 NDALFLPQTREAFRKLENLGLTDAVRATTDATQFYSFWDYQAGAWPKNNGIRIDHLLLSP 180

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
           EA   + SA I+   R W KPSDH PVI   D
Sbjct: 181 EAADRMTSAAIEKHVRAWEKPSDHVPVIAYFD 212


>gi|38233240|ref|NP_939007.1| putative exodeoxyribonuclease [Corynebacterium diphtheriae NCTC
           13129]
 gi|38199499|emb|CAE49150.1| Putative exodeoxyribonuclease [Corynebacterium diphtheriae]
          Length = 301

 Score =  143 bits (361), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 57/301 (18%), Positives = 102/301 (33%), Gaps = 44/301 (14%)

Query: 4   VTVATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKN----FPFETLQS 52
           + + T NVN IRA +         +  W+++   D++ LQE +  +K+            
Sbjct: 1   MQITTVNVNGIRAAVKQRSDANRGMLPWLEQCGSDVVLLQEVRASEKDSLTALAPALDAG 60

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
            +Y       K   GV ILS+    ++   L G     +      +       + + +LY
Sbjct: 61  WHYVGAPAAAKGRAGVGILSRQPLRDVQVGLEGFVDSGRYIQATLSDPDTGHDVVVASLY 120

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
           LP G+   + K D+K  ++  F  F  Q  +    ++  GD+NI  +  D  N       
Sbjct: 121 LPSGS-ADTDKQDEKYRFLDVFGPFLEQAAQDNPHMVVGGDWNICHRMQDLKNWKTNRKK 179

Query: 173 ACFTLEVRQSFQ--------------------------------KLQNMGFTDAIRATHD 200
           + F  + R                                       +  + D  R    
Sbjct: 180 SGFLPDERAFMDSVFGVFPDSESQVSDAGQWAGAVDYTSQQRRTPANDPKWFDVARRLAP 239

Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
               Y++W Y   ++  N G RID+   +           +D       + SDH+P+ V 
Sbjct: 240 EDAAYTWWTYRGQAFDTNAGWRIDYQAATSAMLERATRCWVDKAAAYDLRWSDHSPLTVV 299

Query: 261 L 261
            
Sbjct: 300 Y 300


>gi|329113350|ref|ZP_08242131.1| Exodeoxyribonuclease III [Acetobacter pomorum DM001]
 gi|326697175|gb|EGE48835.1| Exodeoxyribonuclease III [Acetobacter pomorum DM001]
          Length = 245

 Score =  143 bits (361), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 66/246 (26%), Positives = 110/246 (44%), Gaps = 6/246 (2%)

Query: 25  IKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKSYNGVAILSKYQPIEIVTHL 83
           ++   PD++CLQETK  D  FP + +++L + H+   G K YNGVAILS++    + T  
Sbjct: 1   MQHLAPDVVCLQETKVPDPLFPEDGVKALGFEHLHYRGMKGYNGVAILSRHPLRPV-TQT 59

Query: 84  PGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLE 143
           P        R + AT       + + + Y+P G      + + K +    F+   ++  +
Sbjct: 60  PIWYGKEDCRHVAATVCTPEGEMELHDFYIPAGGDEPDPETNPKFAHKLAFVEEVTEWFQ 119

Query: 144 LE--EPLIFAGDYNIIPQPHDCYNPIIWENDACF-TLEVRQSFQKLQNMGFTDAIRATHD 200
                  +  GD+NI P  HD ++             E  +  + LQ             
Sbjct: 120 SRPLNRTVLVGDFNIAPLEHDVWSHKQLLKIVSHTPPETERLNRWLQTGFVDAMRHFVPP 179

Query: 201 THHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
              LY++W Y    W K N+G R+DH+ ++P+    LH   +  + R W  PSDH PV+V
Sbjct: 180 EEKLYTWWSYRNRDWKKSNRGRRLDHVWMTPDLLPNLHGMTVVREARDWEGPSDHVPVVV 239

Query: 260 SLDIPE 265
              + +
Sbjct: 240 DFSLSD 245


>gi|225020579|ref|ZP_03709771.1| hypothetical protein CORMATOL_00586 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224946525|gb|EEG27734.1| hypothetical protein CORMATOL_00586 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 299

 Score =  143 bits (361), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 56/297 (18%), Positives = 101/297 (34%), Gaps = 42/297 (14%)

Query: 4   VTVATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKNFPFETLQSL--N 54
           + + T NVN IRA              W+ +  PD++ LQET+  D         +L   
Sbjct: 1   MQITTINVNGIRAATKIRSSTNRGFLPWLFDVAPDVVLLQETRATDAESRTALAPALDAG 60

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           +H  +          +    +   +   +     +   R+I+ T+      + I +LYLP
Sbjct: 61  WHFYSAPSIRKGHAGVGILSRRELVDVRVGLAGFEDVGRYIQGTYPDEDGDVIIASLYLP 120

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
            G  + S K D+K  ++  F +  S        ++  GD+NI  +  D  N      ++ 
Sbjct: 121 VGG-VGSEKQDEKYEFLDAFDQVISDAAIQNSHMVIGGDWNICHREQDLKNYQANRKNSG 179

Query: 175 FTLEVRQSFQKLQNMG--------------------------------FTDAIRATHDTH 202
              + R     +                                    + D  R  H   
Sbjct: 180 CLPDERAFMDHMFGTYPDSQSQVVGAGEWYGAVNYRSKKRRKAPKTPQWYDVARRLHPDD 239

Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
             Y++W Y   ++  + G RID+   +        + R+D       + SDH P+ V
Sbjct: 240 APYTWWTYRGRAFGNDAGWRIDYQAATKSMFERATTMRVDKAVDHAARWSDHAPLTV 296


>gi|145355749|ref|XP_001422113.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144582353|gb|ABP00430.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 273

 Score =  143 bits (361), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 56/273 (20%), Positives = 101/273 (36%), Gaps = 21/273 (7%)

Query: 4   VTVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTEDK---NFPFE-----TLQ 51
           ++V +WNVN +R+ +      L    +  + D++ LQETK           E      L+
Sbjct: 1   LSVVSWNVNGLRSLLKKAPRALDELARRTDADVLVLQETKLGADGRGAVDGEGEAPKFLR 60

Query: 52  SLNY--HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
                 +  +  +K Y+G A+  +      +  +    L       E             
Sbjct: 61  EYGTREYATSTARKGYSGTAMFIRDGDWAKMKRVEATRLSAGGFDDEGRVLTAELDSCFV 120

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLE-LEEPLIFAGDYNIIPQPHDCYNPI- 167
                  +     +  +++   +R +R   + LE   + +I+ GD N+  +  D +    
Sbjct: 121 VNAYVPNSGADLKRLPERVEVWERAIREHVRALESRGKAVIYCGDLNVAHEEIDLWGRHA 180

Query: 168 IWENDACFTLEVRQSFQKLQNMG-FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226
                A FT E R +  +L       D  RA       +++W Y A +  KN+G R+D+I
Sbjct: 181 ENSKSAGFTPEERAAMTRLLEECDLVDTFRAHRPDARAFTYWSYRAGAREKNRGWRLDYI 240

Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
           + S      +  A       G    SDH PV +
Sbjct: 241 LASRRLADSIVDAYALPDVLG----SDHCPVGL 269


>gi|227541836|ref|ZP_03971885.1| possible exodeoxyribonuclease III [Corynebacterium glucuronolyticum
           ATCC 51866]
 gi|227182279|gb|EEI63251.1| possible exodeoxyribonuclease III [Corynebacterium glucuronolyticum
           ATCC 51866]
          Length = 294

 Score =  143 bits (361), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 63/300 (21%), Positives = 104/300 (34%), Gaps = 47/300 (15%)

Query: 1   MSVVTVATWNVNSIRARI---HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL--NY 55
           MS   +A+ NVN IRA          W++  + DI+ LQE +   +        +L   +
Sbjct: 1   MSH-KIASVNVNGIRAAASKSPGFHDWLRTADVDIVLLQEVRATPEQAEKALAPALAEGW 59

Query: 56  HI--ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
           H+       K   GVAIL+     ++ T +PG + D           +   +L +     
Sbjct: 60  HLTLHDSAAKGRAGVAILTTRPVTDVRTGVPGFE-DSGRFVSALVDDLFVASLYLPT--- 115

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
                  + K D+K  ++       +      E  + AGD+NI   P+D  N    +  A
Sbjct: 116 ---GSAGTAKQDEKYRFLDSLEVVLADIAAKHEKAVVAGDWNICHAPNDLKNFNSNKKKA 172

Query: 174 CFTLEVRQSFQKLQ--------------------------------NMGFTDAIRATHDT 201
               + R     +                                 +  + D  R  H  
Sbjct: 173 GCLPDERAFMDSVFGTFPFEESQVESHGRFAGAVDYVREGRREASTSPQWFDVARRLHPE 232

Query: 202 HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
              Y++W Y   ++  N G RID    +        S R+D      T+ SDH P++VS 
Sbjct: 233 DAPYTWWTYRGKAFDTNAGWRIDVQAATKAMLERAESTRVDRADEWGTRWSDHAPLVVSY 292


>gi|305679776|ref|ZP_07402586.1| putative exodeoxyribonuclease III [Corynebacterium matruchotii ATCC
           14266]
 gi|305660396|gb|EFM49893.1| putative exodeoxyribonuclease III [Corynebacterium matruchotii ATCC
           14266]
          Length = 299

 Score =  143 bits (360), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 63/299 (21%), Positives = 110/299 (36%), Gaps = 46/299 (15%)

Query: 4   VTVATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKN----FPFETLQS 52
           + + T NVN IRA              W+ +  PD++ LQET+  D              
Sbjct: 1   MQITTINVNGIRAATKIRSSTNRGFLPWLFDVAPDVVLLQETRATDAESRTALAPALDAG 60

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
            +++     +K + GV ILS+ + I++   L G   +   R+I+ T+  +   + I +LY
Sbjct: 61  WHFYSAPSIRKGHAGVGILSRRELIDVRVGLAG--FEDVGRYIQGTYPDDGDDVIIASLY 118

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
           LP G    S K D+K  ++  F +  S        ++  GD+NI  +  D  N      +
Sbjct: 119 LPVGG-AGSEKQDEKYEFLDAFDQVISDTEIQNSHMVIGGDWNICHREQDLKNYQANRKN 177

Query: 173 ACFTLEVRQSFQKLQNMG--------------------------------FTDAIRATHD 200
           +    + R     +                                    + D  R  H 
Sbjct: 178 SGCLPDERAFMDHMFGTYPDSQSQVVGAGEWYGAVNYRSKKRRQAPKTPQWYDVARRLHP 237

Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
               Y++W Y   ++  + G RID+   +        + R+D       + SDH P+ V
Sbjct: 238 DDAPYTWWTYRGRAFGNDAGWRIDYQAATKSMFERATTMRVDKAVDHAARWSDHAPLTV 296


>gi|281206753|gb|EFA80938.1| hypothetical protein PPL_06173 [Polysphondylium pallidum PN500]
          Length = 2081

 Score =  143 bits (360), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 64/275 (23%), Positives = 106/275 (38%), Gaps = 23/275 (8%)

Query: 4    VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETL-QSLNYHIETCG 61
            + + +WNV    +       A++++  PDI+CLQETK      P + + +   YH   C 
Sbjct: 1250 LKIMSWNVAGFNSCTKKGFKAYVEQEQPDILCLQETKILPSKVPKDAIPKGYEYHFSACR 1309

Query: 62   --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT---QTLRIGNLYLPHG 116
                 +  V IL  +  +          + +     +    I T   +   + N Y+P+ 
Sbjct: 1310 KTWIPWYWVRILLLFDFLLTKVKPISVTMGMGVGKHDKEGRIITAEYEKFYLVNTYVPNS 1369

Query: 117  NPITSTKY---DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
                 T     D +       L      L  ++P+I+ GD N+  +  D  NP      A
Sbjct: 1370 GVDRKTPLARLDYRTKEWDVDLFKYMHELNKKKPVIWTGDLNVAHKEIDLKNPKGNVRTA 1429

Query: 174  CFTLEVRQSFQKLQNMGFTDAIRATHDTHH-LYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
             FT+E R SF      GF D  R  +      Y+FW Y  +S + N G R+D+ ++    
Sbjct: 1430 GFTVEERTSFSGFLESGFVDTFRHFNPKKEFQYTFWSYMRNSRASNAGWRLDYFIVPLTF 1489

Query: 233  TSLLHSARIDTKPRGWTKPSD-------H-TPVIV 259
               +  + I    R     SD       H  P+I+
Sbjct: 1490 IGSVAHSFI----RSKVTGSDCLFIRYTHSYPIIL 1520


>gi|227874670|ref|ZP_03992832.1| possible exodeoxyribonuclease III [Mobiluncus mulieris ATCC 35243]
 gi|269976389|ref|ZP_06183379.1| exodeoxyribonuclease III [Mobiluncus mulieris 28-1]
 gi|227844743|gb|EEJ54890.1| possible exodeoxyribonuclease III [Mobiluncus mulieris ATCC 35243]
 gi|269935410|gb|EEZ91954.1| exodeoxyribonuclease III [Mobiluncus mulieris 28-1]
          Length = 294

 Score =  143 bits (360), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 55/294 (18%), Positives = 95/294 (32%), Gaps = 32/294 (10%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + V T NVN +RA        W++ ++ D++CLQE +   ++       + + H+  C  
Sbjct: 1   MKVTTVNVNGVRAAFRKGFGDWLENDDSDLLCLQEVRATPQDTQDLFGPAWDVHVWPCRV 60

Query: 63  KSYNGVAILSKYQPIE-IVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           K   GVA+ ++      I     G   D+ A         + + L               
Sbjct: 61  KGRAGVALGARRDSDWEIGQLTEGLPPDLYAEVGGEPDVDSGRWLEAAIHEPQGTTFTLV 120

Query: 122 TKYDDKISWIKRFLRFASQRLEL--------------------EEPLIFAGDYNIIPQPH 161
           + Y                 L                       +  +  GD+NI+    
Sbjct: 121 SAYLHSGELRTEKQEQKIAFLHRVGERVQQLSARAMAGAGSDTPQEALICGDFNIVRTAR 180

Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNM----------GFTDAIRATHDTHHLYSFWDYY 211
           D  N     N     ++   +F                          DT   Y++W + 
Sbjct: 181 DIKNWKPNHNKTSGVMDEEIAFLDAWMADTLSGSKRLPCVDVGRALAGDTDGPYTWWSWR 240

Query: 212 ADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
             ++  N G R+D+ M +P       SA +   P    + +DH PV V+ D PE
Sbjct: 241 GKAYDNNAGWRLDYHMATPGLAGQAQSAAVYRAPAYDARFTDHAPVTVAYDFPE 294


>gi|145511051|ref|XP_001441453.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124408703|emb|CAK74056.1| unnamed protein product [Paramecium tetraurelia]
          Length = 374

 Score =  143 bits (360), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 73/276 (26%), Positives = 117/276 (42%), Gaps = 25/276 (9%)

Query: 4   VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETL------QSLNY 55
           + +++WN+N +RA  +  +  +++ + N DIICL E K   + F  E L          Y
Sbjct: 105 LKISSWNINGLRASSKKESAVSYLNDKNFDIICLNELKVAQEAFEKENLITKLPKDYFAY 164

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
                 +  Y+GVAILSK +PI I   +  +  D + R I A F        +       
Sbjct: 165 LNFCKIKAGYSGVAILSKVKPISIKYDMGIEKHDQEGRIITAEFEKFN---LVACYVPNS 221

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA-- 173
           G+ +     + +        +    +L+  +  I  GD N+     D  NP   +  A  
Sbjct: 222 GDKLDR--LNYRTQEWDVDFQNYLDKLKQTKNTIICGDLNVSHTEIDLANPEGNKRSAGQ 279

Query: 174 ------CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227
                  FT E R SF K  + G+ D  R  H     YS++    +S   NKG RID+ +
Sbjct: 280 LIIYDQRFTQEERDSFSKFLSKGWIDTFRHLHPKEIKYSYFSPRFNSRETNKGWRIDYFV 339

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           ++ EA   +  + I T   G    SDH P+   +D+
Sbjct: 340 VNQEAVGSVIQSDIKTTILG----SDHVPIECDIDL 371


>gi|227487001|ref|ZP_03917317.1| possible exodeoxyribonuclease III [Corynebacterium glucuronolyticum
           ATCC 51867]
 gi|227093075|gb|EEI28387.1| possible exodeoxyribonuclease III [Corynebacterium glucuronolyticum
           ATCC 51867]
          Length = 294

 Score =  143 bits (360), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 61/300 (20%), Positives = 103/300 (34%), Gaps = 47/300 (15%)

Query: 1   MSVVTVATWNVNSIRARI---HNLAAWIKENNPDIICLQETKTEDKN----FPFETLQSL 53
           MS   +A+ NVN IRA          W++  + DI+ LQE +   +           +  
Sbjct: 1   MSH-KIASINVNGIRAAASKSPGFHDWLRTADVDIVLLQEVRATPEQAQKALAPALAEGW 59

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
           N  +    QK   GVAIL+    +++   +PG + D           +   +L +     
Sbjct: 60  NLTLSDSAQKGRAGVAILTTQPVVDVHMGVPGFE-DSGRFVSALVDDLFVASLYLPT--- 115

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
                  + K D+K  ++       +      E  + AGD+NI   P+D  N    +  A
Sbjct: 116 ---GSAGTAKQDEKYRFLDSLEVVLADIAAKHEKAVVAGDWNICHAPNDLKNFNSNKKKA 172

Query: 174 CFTLEVRQSFQKLQ--------------------------------NMGFTDAIRATHDT 201
               + R     +                                 +  + D  R  H  
Sbjct: 173 GCLPDERAFMDSVFGTFPFEESQVESHGRFAGAVDYVREGRREASTSPQWFDVARRLHPE 232

Query: 202 HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
              Y++W Y   ++  N G RID    +        S R+D      T+ SDH P++V+ 
Sbjct: 233 DAPYTWWTYRGKAFDTNAGWRIDVQAATKAMMERAESTRVDRADEWGTRWSDHAPLVVTY 292


>gi|255074455|ref|XP_002500902.1| predicted protein [Micromonas sp. RCC299]
 gi|226516165|gb|ACO62160.1| predicted protein [Micromonas sp. RCC299]
          Length = 301

 Score =  143 bits (359), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 63/282 (22%), Positives = 109/282 (38%), Gaps = 22/282 (7%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKE----NNPDIICLQETKTEDKNFPFET---LQSLN 54
           S +TV +WNVNSIRA +      + E     + D++ LQETK ++K+ P      L    
Sbjct: 24  SKLTVLSWNVNSIRALLDKDPDILDEVAASEDADVVLLQETKLQEKHVPEMDARVLAKYP 83

Query: 55  YHIETCGQKS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           Y    C      Y+G A+  + +P     H P +  + +         +    +      
Sbjct: 84  YRTWNCSTSRLGYSGTAMFLRLEPTRAPWHDPFEMDEFEGEGRVVCAELPNVFVVGAYCP 143

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII-WEN 171
                         +          + Q     +P+++ GD N+  +P D +        
Sbjct: 144 NSGEGLARLRARTKEWDPRMSAYLSSLQASAGGKPVVYCGDLNVANEPIDLWGNHAANSL 203

Query: 172 DACFTLEVRQSFQKLQNMGFTDAI--------RATHDTHHLYSFWDYYADSWSKNKGIRI 223
            + +T E R SF++L      D           A       ++++ Y A +  +N+G RI
Sbjct: 204 ASGYTPEERDSFKRLLLGPIRDGGAGLVDTFREAHGTDAKAFTYFSYRAGARPRNRGWRI 263

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           D+ ++S      +H A I    RG    SDH P+ V + + E
Sbjct: 264 DYALVSESLRGEVHDAFI----RGDVGGSDHCPIGVVVKLRE 301


>gi|330812595|ref|YP_004357057.1| catabolite repression control protein [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
 gi|327380703|gb|AEA72053.1| catabolite repression control protein [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
          Length = 259

 Score =  143 bits (359), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 69/264 (26%), Positives = 112/264 (42%), Gaps = 13/264 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + + NVN I+A +   L +W++  N D+ICLQ+T+           Q   Y +  C  
Sbjct: 1   MRIISVNVNGIQAAVERGLLSWLQAQNADVICLQDTRASAFELDDAAFQLDGYFLYACDA 60

Query: 62  -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
              +  GVA+ S+ QP  ++  L  +  D   R+++A F      + I  L LP G    
Sbjct: 61  EVPAQGGVALYSRLQPKAVINGLGFETADRYGRYLQADFD----KVSIATLLLPSGQN-G 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF-TLEV 179
               + K   +  F R+  ++       I+ G   +  Q  D  N    +    F   E 
Sbjct: 116 DEDLNQKFKLMDDFARYLDKQRRKRREYIYCGSLYVAQQKLDIKNWRDSQQSPGFLAPER 175

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
               + + NMG+ DA+R        YS+W     +   N G R D+ +L+P     + SA
Sbjct: 176 AWMDEIIGNMGYVDALREVSREGDQYSWWPDNEQAEMLNLGWRFDYQLLTPGLRRFVRSA 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
           R+  +PR     S H P+IV  D 
Sbjct: 236 RLPRQPR----FSQHAPLIVDYDW 255


>gi|320334708|ref|YP_004171419.1| exodeoxyribonuclease III Xth [Deinococcus maricopensis DSM 21211]
 gi|319755997|gb|ADV67754.1| exodeoxyribonuclease III Xth [Deinococcus maricopensis DSM 21211]
          Length = 267

 Score =  142 bits (358), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 63/258 (24%), Positives = 107/258 (41%), Gaps = 19/258 (7%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           V + T NVN +R+ +   L  W+  + PD++ LQE + +      E  + L Y       
Sbjct: 12  VRITTLNVNGLRSALRKGLREWVVTHAPDVLLLQEVRADPM---PEAFEDLGYASAWHPA 68

Query: 62  -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +  Y+GVAILS+    ++   +                +  T  +R+ ++YLP G+   
Sbjct: 69  VKPGYSGVAILSRRGLEDVRVGM----GLADVDVEGRVLSAVTDGVRVASVYLPSGS-SG 123

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   K   +  +  +    L L    +  GDYN+  Q  D  N      ++ F    R
Sbjct: 124 EVRQGFKDRVLPLYHAWVESLLPLGPL-VIGGDYNVAHQNVDIRNWRGNLKNSGFLPHER 182

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
               +    G TDA RA       Y++W    ++++ + G RID+++ S  A   L   R
Sbjct: 183 AWMTQHLAAGLTDAHRARLGERAEYTWWSNRGNAYANDVGWRIDYLLTSGVA---LREVR 239

Query: 241 IDTKPRGWTKPSDHTPVI 258
           +D   R     SDH P+ 
Sbjct: 240 VDRSVR----LSDHAPLT 253


>gi|311739953|ref|ZP_07713787.1| possible exodeoxyribonuclease III [Corynebacterium pseudogenitalium
           ATCC 33035]
 gi|311305026|gb|EFQ81095.1| possible exodeoxyribonuclease III [Corynebacterium pseudogenitalium
           ATCC 33035]
          Length = 305

 Score =  142 bits (358), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 55/304 (18%), Positives = 99/304 (32%), Gaps = 46/304 (15%)

Query: 3   VVTVATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKNFPFETLQSL-- 53
            +T+A+ NVN IRA           + AW++E   DI+ +QE +   +        +L  
Sbjct: 2   TLTIASVNVNGIRAACKQRNENNPGMNAWLEETPADIVLMQEVRATPEQAEKALAPALEA 61

Query: 54  NYHIE--TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
            +H+       K   GV ILS+    ++           +      T  I   +L + + 
Sbjct: 62  GWHLALADAAAKGRAGVGILSRTPLADVEVGFGSFTDAGRW-IAATTRDIRVASLYLPSG 120

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
                      ++ D+   +       +        ++  GD+NI  +  D  N    E 
Sbjct: 121 DTGSPKLDEKYRFLDEFQEVLAENAAHTNSDGSPADMVIGGDWNICHRAQDLKNNKANEK 180

Query: 172 DACFTLEVRQSFQKLQ---------------------------------NMGFTDAIRAT 198
            A    E R     +                                     + D  R  
Sbjct: 181 KAGHLPEERAFMDHVFGAFPDDKPQEKKNLGQWQGVVEYAGGEPWSPAAEPQWFDVARRL 240

Query: 199 HDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257
           H      Y++W Y   +++ N G RID+  ++           +D  P    + SDH+P+
Sbjct: 241 HPEEDGPYTWWTYRGQAFNNNAGWRIDYQAVTRPMLERAQRTWVDKAPTVEQRWSDHSPL 300

Query: 258 IVSL 261
           +V  
Sbjct: 301 LVEY 304


>gi|325283015|ref|YP_004255556.1| exodeoxyribonuclease III Xth [Deinococcus proteolyticus MRP]
 gi|324314824|gb|ADY25939.1| exodeoxyribonuclease III Xth [Deinococcus proteolyticus MRP]
          Length = 264

 Score =  142 bits (358), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 60/259 (23%), Positives = 105/259 (40%), Gaps = 19/259 (7%)

Query: 4   VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +TV T N+N +R AR   L  W+  + PD++ LQE +        E L++L YH      
Sbjct: 15  LTVTTLNLNGLRSARRKGLEDWLTRHAPDVLLLQEVRAPAM---PEVLEALGYHSAWHPA 71

Query: 63  KS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           +   Y+GVAI S+    ++   +                +     +R  ++YLP G+   
Sbjct: 72  QKAGYSGVAIASRLPLQDVRLGM----GHEAMDAEGRLISAQVAGVRFASVYLPSGS-SG 126

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   K   +  +  +  ++       +  GDYNI  QP D  N    +N++ F    R
Sbjct: 127 EVRQSFKDRLLLDYQIWTDRQRTQGPL-VIGGDYNIAHQPIDLKNWRSNQNNSGFLPHER 185

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           +        G +D+ R        Y++W     +++ + G RID+++ S           
Sbjct: 186 EWMTAHLASGLSDSHRLHLGERAEYTWWSNRGQAYTNDTGWRIDYLLTSQV---QTADVW 242

Query: 241 IDTKPRGWTKPSDHTPVIV 259
           +D   R     SDH P+  
Sbjct: 243 VDRPAR----LSDHAPLTA 257


>gi|324515683|gb|ADY46281.1| Recombination repair protein 1 [Ascaris suum]
          Length = 378

 Score =  142 bits (358), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 62/265 (23%), Positives = 110/265 (41%), Gaps = 15/265 (5%)

Query: 4   VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTED--KNFPFETLQSLNYHIETC 60
           +T+ TWNV  +RA    +   +I  +  DI+ LQETK  +    FP +  ++  +  E  
Sbjct: 124 LTIITWNVAGLRALVKKDACRFITSDKADIVLLQETKCAEVPTGFPVKGFKA--FVGENP 181

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           G+  + GV +LSK +PI++ T L       +                + N Y+P+     
Sbjct: 182 GKTGHAGVILLSKQKPIKVQTKLENVP--EELGVEGRLIVAEYDKFYLINAYVPNSGRGL 239

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA--CFTLE 178
                 KI     F     ++L+  + +I+AGD N+  +  D  NP    N        E
Sbjct: 240 VNLAKRKIWD--DFFIDYIKQLDASKAVIYAGDLNVAHEEIDLANPKTNRNKTAGFTDQE 297

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
                + LQ            D    Y+FW    ++ + N G R+D+ ++S      +  
Sbjct: 298 RGDFTRLLQAGFVDVYRSLHPDKTGAYTFWSTMHNARATNIGWRLDYFVVSERLMDKVVK 357

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263
             I+++  G    SDH P+ + +++
Sbjct: 358 CEINSRVMG----SDHCPLTLQINL 378


>gi|62389560|ref|YP_224962.1| exodeoxyribonuclease [Corynebacterium glutamicum ATCC 13032]
 gi|41324894|emb|CAF19376.1| PUTATIVE EXODEOXYRIBONUCLEASE [Corynebacterium glutamicum ATCC
           13032]
          Length = 319

 Score =  142 bits (357), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 57/296 (19%), Positives = 103/296 (34%), Gaps = 45/296 (15%)

Query: 6   VATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKN----FPFETLQSLN 54
           + + NVN IRA +            W++E  PD++ LQE +  +K+             +
Sbjct: 20  ITSVNVNGIRAAVKQRSETNLGFLPWLEETRPDVVLLQEVRASEKDTATALQPALDNGWH 79

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           Y       K   GV ILS+++  ++           +        T     + + +LYLP
Sbjct: 80  YIGAPAAAKGRAGVGILSRHELEDVNIGFGSFLDSGRYIEATIKDTTLDVPVTVASLYLP 139

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
            G+   + K D+K  ++  F  F  QR +    ++  GD+NI  +  D  N    +  + 
Sbjct: 140 SGS-AGTDKQDEKYRFLDEFEGFLDQRAKERSHMVIGGDWNICHRREDLKNWKTNQKKSG 198

Query: 175 FTLEVRQSFQKLQN---------------------------------MGFTDAIRATHDT 201
           F  + R     +                                     F  A R   + 
Sbjct: 199 FLPDERAFMDSVFGTFPDEATQVAGAGDFFGAVDYEGTRRREATTDPAWFDVARRLQPEG 258

Query: 202 HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257
              Y++W Y   ++    G RID+   +         + +D       + SDH+P+
Sbjct: 259 DGPYTWWTYRGKAFDTGAGWRIDYQAATAAMLERAERSWVDKAAAYDLRWSDHSPL 314


>gi|219683204|ref|YP_002469587.1| exodeoxyribonuclease [Bifidobacterium animalis subsp. lactis AD011]
 gi|241191164|ref|YP_002968558.1| exodeoxyribonuclease [Bifidobacterium animalis subsp. lactis Bl-04]
 gi|241196570|ref|YP_002970125.1| exodeoxyribonuclease [Bifidobacterium animalis subsp. lactis DSM
           10140]
 gi|219620854|gb|ACL29011.1| possible exodeoxyribonuclease [Bifidobacterium animalis subsp.
           lactis AD011]
 gi|240249556|gb|ACS46496.1| exodeoxyribonuclease [Bifidobacterium animalis subsp. lactis Bl-04]
 gi|240251124|gb|ACS48063.1| exodeoxyribonuclease [Bifidobacterium animalis subsp. lactis DSM
           10140]
 gi|289177272|gb|ADC84518.1| Exodeoxyribonuclease III [Bifidobacterium animalis subsp. lactis
           BB-12]
 gi|295794157|gb|ADG33692.1| exodeoxyribonuclease [Bifidobacterium animalis subsp. lactis V9]
          Length = 286

 Score =  142 bits (357), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 59/284 (20%), Positives = 106/284 (37%), Gaps = 24/284 (8%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPF--------------- 47
           +T+ T N+N IRA        W K + P++ C+QET+   +                   
Sbjct: 3   LTITTSNLNGIRAAKRKGFDHWAKAHTPNVWCMQETRAPQEIIADIYGELAADYVHAGKI 62

Query: 48  ETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR--FIEATFTINTQT 105
            + + L+  ++ C  K   GV ++S    +E    LPG + DV +         T     
Sbjct: 63  ASPEELHTLVDVCRIKGRAGVGMISDMPVLETRVGLPGLEEDVDSGRWIEADVRTEQGYV 122

Query: 106 LRIGNLYLPHGNPITS----TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161
           + +  +Y+  G  +       KY    +  +R  +   +        +  GD+NI   P 
Sbjct: 123 ITVVCVYVHAGGLVDDPKEAQKYRFLDTMTERMQQLQDEAASGGRQAVVCGDFNIAHNPI 182

Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNM--GFTDAIRATHDTHHLYSFWDYYADSWSKNK 219
           D  NP   EN+  +    R    K  +             D    Y++W     ++  + 
Sbjct: 183 DLKNPKSNENNNGYFPRERAYMDKWIDQMDYVDVMRDLAGDIQGPYTWWSQRGRAFDNDS 242

Query: 220 GIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           G R+D+   +PE         +D      ++ SDH P+ +S D+
Sbjct: 243 GWRLDYQFATPELAQQARGFVVDRASSYDSRWSDHAPLTISYDV 286


>gi|255323939|ref|ZP_05365065.1| exodeoxyribonuclease III [Corynebacterium tuberculostearicum SK141]
 gi|255299119|gb|EET78410.1| exodeoxyribonuclease III [Corynebacterium tuberculostearicum SK141]
          Length = 305

 Score =  142 bits (357), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 55/304 (18%), Positives = 98/304 (32%), Gaps = 46/304 (15%)

Query: 3   VVTVATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKNFPFETLQSL-- 53
            +T+A+ NVN IRA           + AW++E   DI+ +QE +   +        +L  
Sbjct: 2   TLTIASVNVNGIRAACKQRNENNPGMNAWLEETPADIVLMQEVRATPEQAEKALAPALEA 61

Query: 54  NYHIE--TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
            +H+       K   GV ILS+    ++           +      T  I   +L + + 
Sbjct: 62  GWHLALADAAAKGRAGVGILSRTPLADVEVGFGSFTDAGRW-IAATTRDIRVASLYLPSG 120

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
                      ++ D+   +       +        ++  GD+NI  +  D  N    E 
Sbjct: 121 DTGSPKLDEKYRFLDEFQEVLAENAARTNSDGSPADMVIGGDWNICHRAQDLKNNKANEK 180

Query: 172 DACFTLEVRQSFQKLQ---------------------------------NMGFTDAIRAT 198
            A    E R     +                                     + D  R  
Sbjct: 181 KAGHLPEERAFMDHVFGAFPDDKPQEKKNLGQWQGVVEYAGGEPWAPAAEPQWFDVARRL 240

Query: 199 HDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257
           H      Y++W Y   +++ N G RID+   +           +D  P    + SDH+P+
Sbjct: 241 HPEEDGPYTWWTYRGQAFNNNAGWRIDYQAATRPMLERAQRTWVDKAPTVEQRWSDHSPL 300

Query: 258 IVSL 261
           +V  
Sbjct: 301 LVEY 304


>gi|229593354|ref|YP_002875473.1| putative exodeoxyribonuclease III [Pseudomonas fluorescens SBW25]
 gi|50660344|gb|AAT80896.1| catabolite repression control protein [Pseudomonas fluorescens]
 gi|229365220|emb|CAY53517.1| putative exodeoxyribonuclease III [Pseudomonas fluorescens SBW25]
          Length = 259

 Score =  141 bits (355), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 69/264 (26%), Positives = 113/264 (42%), Gaps = 13/264 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + + NVN I+A +   L +W++  N D+ICLQ+T+           Q   Y +  C  
Sbjct: 1   MRIISVNVNGIQAAVERGLLSWLQAQNADVICLQDTRASAFELDDPAFQLDGYFLYACDA 60

Query: 62  -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
              +  GVA+ S+ QP  +++ L  +  D   R+++A F      + I  L LP G    
Sbjct: 61  EVPTQGGVALYSRLQPKAVISGLGFETADRYGRYLQADFD----KVSIATLLLPSGQN-G 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF-TLEV 179
               + K   +  F R+  ++       I+ G   +  Q  D  N    +    F   E 
Sbjct: 116 DEDLNQKFKLMDDFARYLDKQRRKRREYIYCGSLYVAQQKLDIKNWRDSQQSPGFLAPER 175

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
               + + NMG+ DA+R        YS+W     +   N G R D+ +L+P     + SA
Sbjct: 176 AWMDEIVGNMGYVDALREVSREGDQYSWWPDNEQAEMLNLGWRFDYQLLTPGLRRFVRSA 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
           R+  +PR     S H P+IV  D 
Sbjct: 236 RLPRQPR----FSQHAPLIVDYDW 255


>gi|312963856|ref|ZP_07778327.1| exodeoxyribonuclease III [Pseudomonas fluorescens WH6]
 gi|311281891|gb|EFQ60501.1| exodeoxyribonuclease III [Pseudomonas fluorescens WH6]
          Length = 259

 Score =  141 bits (355), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 69/264 (26%), Positives = 113/264 (42%), Gaps = 13/264 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + + NVN I+A +   L +W++  N D+ICLQ+T+           Q   Y +  C  
Sbjct: 1   MRIISVNVNGIQAAVERGLLSWLQAQNADVICLQDTRASAFELDDPAFQLDGYFLYACDA 60

Query: 62  -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
              +  GVA+ S+ QP  +++ L  +  D   R+++A F      + I  L LP G    
Sbjct: 61  EVPAQGGVALYSRLQPKAVISGLGFETADRYGRYLQADFD----KVSIATLLLPSGQN-G 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF-TLEV 179
               + K   +  F R+  ++       I+ G   +  Q  D  N    +    F   E 
Sbjct: 116 DEDLNQKFKLMDDFARYLDKQRRKRREYIYCGSLYVAQQKLDIKNWRDSQQSPGFLAPER 175

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
               + + NMG+ DA+R        YS+W     +   N G R D+ +L+P     + SA
Sbjct: 176 AWMDEIVGNMGYVDALREVSREGDQYSWWPDNEQAEMLNLGWRFDYQLLTPGLRRFVRSA 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
           R+  +PR     S H P+IV  D 
Sbjct: 236 RLPRQPR----FSQHAPLIVDYDW 255


>gi|298345652|ref|YP_003718339.1| exodeoxyribonuclease III [Mobiluncus curtisii ATCC 43063]
 gi|298235713|gb|ADI66845.1| exodeoxyribonuclease III [Mobiluncus curtisii ATCC 43063]
          Length = 269

 Score =  141 bits (355), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 59/269 (21%), Positives = 108/269 (40%), Gaps = 27/269 (10%)

Query: 21  LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80
           + A+++  N D++ +QE K  +  FP    ++  Y +   G   +NGVA+ ++      +
Sbjct: 1   MTAFLERENIDVLAMQEIKCRNDQFPTLAFETAGYQVFVNGLNQWNGVAVAARQGISAHL 60

Query: 81  THLPGDDLDVQARFIEATFT---------INTQTLRIGNLYLPHGNPITSTKYDDKISWI 131
                     Q  F               +    +   +LY+P+G  +    Y  K+ W+
Sbjct: 61  LGTEFYGAIDQPYFSVPPKPPQLEPRVLGVRVAGVECWSLYVPNGREVGHLHYQYKLKWL 120

Query: 132 KRFLRFASQRLELEEPLI--FAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNM 189
                   + L+ +   +  + GD+N+ P+  D ++   +      +   RQ F KL + 
Sbjct: 121 DSLRSHVIRTLDTDPESLGLYLGDFNVAPRDEDVWDLADFAAATHVSEPERQVFAKLLDP 180

Query: 190 GFTDAIRATHD----------------THHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
                    HD                    +++WDY    W +N+G++ID  + +P   
Sbjct: 181 DTVADAVTLHDDLIGGLPGNLTEITRKFAPGWTYWDYQRARWRRNQGMKIDFALATPRLV 240

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
           S +  A IDT  R   +PSDH PVIV  +
Sbjct: 241 SRVTGAYIDTAERDGEQPSDHAPVIVDFE 269


>gi|283456347|ref|YP_003360911.1| exodeoxyribonuclease III [Bifidobacterium dentium Bd1]
 gi|283102981|gb|ADB10087.1| xth Exodeoxyribonuclease III [Bifidobacterium dentium Bd1]
          Length = 277

 Score =  141 bits (355), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 65/277 (23%), Positives = 94/277 (33%), Gaps = 26/277 (9%)

Query: 12  NSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI------------- 57
           N IRA     +  W   N PDI C+QE +               +               
Sbjct: 2   NGIRAAKRKGIEIWAGRNTPDIWCMQEVRAPQHEIDP-IFDEFGFEYSTAGKIADQSELD 60

Query: 58  ---ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR--FIEATFTINTQTLRIGNLY 112
              E C  K   GV +LS    I+    LPG D DV +         T     + +  +Y
Sbjct: 61  RLNEVCRIKGRAGVGLLSALPVIDKRYGLPGLDDDVDSGRWIEADVKTPQGYIVTVVCVY 120

Query: 113 LPHGNPITS----TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168
           +  GN         KY    + ++R  +   +        +  GD+NI   P D  N   
Sbjct: 121 VHAGNTDDPAKMEQKYRFLDTMLERMGQLRDEAAHGGRQSVLCGDFNIAHTPLDIKNAKA 180

Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSWSKNKGIRIDHI 226
            E  A F  E R    K         +      D    Y++W     ++  N G RID+ 
Sbjct: 181 NETHAGFLPEERAYVDKWLGELEFVDVMRNLAGDIQGPYTWWSQRGRAFDNNVGWRIDYQ 240

Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             +PE         ID  P    + SDH P+ ++ DI
Sbjct: 241 FATPELAESACGFVIDKAPTYDKRWSDHAPLTITYDI 277


>gi|70733340|ref|YP_263115.1| exodeoxyribonuclease III [Pseudomonas fluorescens Pf-5]
 gi|68347639|gb|AAY95245.1| exodeoxyribonuclease III, putative [Pseudomonas fluorescens Pf-5]
          Length = 259

 Score =  141 bits (355), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 69/264 (26%), Positives = 113/264 (42%), Gaps = 13/264 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + + NVN I+A +   L +W++  N D+ICLQ+T+           Q   Y +  C  
Sbjct: 1   MRIISVNVNGIQAAVERGLLSWLQAQNADVICLQDTRASAFELDDPAFQLDGYFLYACDA 60

Query: 62  -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
              +  GVA+ S+ QP  +++ L  +  D   R+++A F      + I  L LP G    
Sbjct: 61  EVPAQGGVALYSRLQPKAVISGLGFETADRYGRYLQADFD----KVSIATLLLPSGQN-G 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF-TLEV 179
               + K   +  F R+  ++       I+ G   +  Q  D  N    +    F   E 
Sbjct: 116 DEDLNQKFKLMDDFARYLDKQRRKRREYIYCGSLYVAQQKLDIKNWRDSQQSPGFLAPER 175

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
               + + NMG+ DA+R        YS+W     +   N G R D+ +L+P     + SA
Sbjct: 176 AWMDEIIGNMGYVDALREVSREGDQYSWWPDNEQAEMLNLGWRFDYQLLTPGLRRFVRSA 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
           R+  +PR     S H P+IV  D 
Sbjct: 236 RLPRQPR----FSQHAPLIVDYDW 255


>gi|148544535|ref|YP_001271905.1| exodeoxyribonuclease III Xth [Lactobacillus reuteri DSM 20016]
 gi|184153898|ref|YP_001842239.1| exodeoxyribonuclease III [Lactobacillus reuteri JCM 1112]
 gi|227363037|ref|ZP_03847174.1| exodeoxyribonuclease III Xth [Lactobacillus reuteri MM2-3]
 gi|325682856|ref|ZP_08162372.1| exodeoxyribonuclease III [Lactobacillus reuteri MM4-1A]
 gi|148531569|gb|ABQ83568.1| exodeoxyribonuclease III Xth [Lactobacillus reuteri DSM 20016]
 gi|183225242|dbj|BAG25759.1| exodeoxyribonuclease III [Lactobacillus reuteri JCM 1112]
 gi|227071921|gb|EEI10207.1| exodeoxyribonuclease III Xth [Lactobacillus reuteri MM2-3]
 gi|324977206|gb|EGC14157.1| exodeoxyribonuclease III [Lactobacillus reuteri MM4-1A]
          Length = 253

 Score =  141 bits (355), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 67/258 (25%), Positives = 106/258 (41%), Gaps = 13/258 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +W+VN +++ I H      K  + D  CLQ T+ +    P +      Y      +
Sbjct: 1   MKFISWSVNGLKSAINHGFVEDFKRQDADFFCLQRTRLDKGEEPIQIPNYYQY-WNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +KY+P  ++  +     D + R I   +        I       G  +   
Sbjct: 60  KGYSGTAIFTKYKPENVIYGMNNSIFDKEGRLITLEYP---NFYLIDVYVPVSGEKLQHL 116

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
            Y        R        L+  +P+I  GD +I  QP D   P    + A FT + R  
Sbjct: 117 DYR---LDWDRAFLDYVINLQSSKPVIIGGDMSIAYQPIDLAEPTENHHKAGFTKQERAD 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F KL N G TD  R  H   H  Y++W Y  D+  +N G R+D+ ++S      +  A+I
Sbjct: 174 FGKLLNAGLTDTFRYLHPNLHGAYTWWSYRYDARERNVGWRLDYFLVSDVWKERIEEAKI 233

Query: 242 DTKPRGWTKPSDHTPVIV 259
            +      K S H P+ +
Sbjct: 234 LSDV----KGSSHCPIEL 247


>gi|124265282|ref|YP_001019286.1| DNA-(apurinic or apyrimidinic site) lyase [Methylibium
           petroleiphilum PM1]
 gi|124258057|gb|ABM93051.1| DNA-(apurinic or apyrimidinic site) lyase [Methylibium
           petroleiphilum PM1]
          Length = 263

 Score =  141 bits (354), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 60/268 (22%), Positives = 112/268 (41%), Gaps = 12/268 (4%)

Query: 3   VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNF--PFETLQSLNYHIET 59
           ++ + + N+N IR A       W +++  D + +QE K +  +    F+ +  L  H   
Sbjct: 1   MLRLVSLNLNGIRSAANKGWVEWAEKSAIDCMGVQELKAQAADLGGRFDQVAGLKGHFHY 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y+GV + ++  P +++T +   + D + R++EA F    + L I + Y P G+  
Sbjct: 61  ADKKGYSGVGLYTRGTPSDVITGIGEPEFDAEGRYVEARFDTPQRKLSIISCYFPSGSSS 120

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +                + L+     I  GD NI  +  D  N    + ++ F  E 
Sbjct: 121 DERQQA--KFRFLALFYPYLELLKATREFILVGDVNIAHREIDLKNWKSNQKNSGFLPEE 178

Query: 180 RQSFQKLQNMGFTDAIRA---THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
           R    +  +      +       DT   Y++W     +W+ N G RID+ + +P   +L 
Sbjct: 179 RAWMSRALDELGLVDVHRTLRPDDTGEAYTWWSNRGQAWANNVGWRIDYHLATPALAALA 238

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDIP 264
            SA +    R     SDH P+ V  ++ 
Sbjct: 239 RSASVYKAQR----FSDHAPLTVDYELS 262


>gi|19551901|ref|NP_599903.1| exonuclease III [Corynebacterium glutamicum ATCC 13032]
 gi|21323437|dbj|BAB98064.1| Exonuclease III [Corynebacterium glutamicum ATCC 13032]
          Length = 304

 Score =  141 bits (354), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 57/296 (19%), Positives = 103/296 (34%), Gaps = 45/296 (15%)

Query: 6   VATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKN----FPFETLQSLN 54
           + + NVN IRA +            W++E  PD++ LQE +  +K+             +
Sbjct: 5   ITSVNVNGIRAAVKQRSETNLGFLPWLEETRPDVVLLQEVRASEKDTATALQPALDNGWH 64

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           Y       K   GV ILS+++  ++           +        T     + + +LYLP
Sbjct: 65  YIGAPAAAKGRAGVGILSRHELEDVNIGFGSFLDSGRYIEATIKDTTLDVPVTVASLYLP 124

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
            G+   + K D+K  ++  F  F  QR +    ++  GD+NI  +  D  N    +  + 
Sbjct: 125 SGS-AGTDKQDEKYRFLDEFEGFLDQRAKERSHMVIGGDWNICHRREDLKNWKTNQKKSG 183

Query: 175 FTLEVRQSFQKLQN---------------------------------MGFTDAIRATHDT 201
           F  + R     +                                     F  A R   + 
Sbjct: 184 FLPDERAFMDSVFGTFPDEATQVAGAGDFFGAVDYEGTRRREATTDPAWFDVARRLQPEG 243

Query: 202 HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257
              Y++W Y   ++    G RID+   +         + +D       + SDH+P+
Sbjct: 244 DGPYTWWTYRGKAFDTGAGWRIDYQAATAAMLERAERSWVDKAAAYDLRWSDHSPL 299


>gi|28493652|ref|NP_787813.1| exodeoxyribonuclease [Tropheryma whipplei str. Twist]
 gi|28572845|ref|NP_789625.1| exodeoxyribonuclease [Tropheryma whipplei TW08/27]
 gi|28410978|emb|CAD67363.1| putative exodeoxyribonuclease [Tropheryma whipplei TW08/27]
 gi|28476694|gb|AAO44782.1| putative exodeoxyribonuclease [Tropheryma whipplei str. Twist]
          Length = 281

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 64/285 (22%), Positives = 112/285 (39%), Gaps = 30/285 (10%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++ VA+ NVN IRA     +  W+KE NPDI+ +QE + ++ +     L + N   + C 
Sbjct: 1   MLEVASVNVNGIRAAHRKGMDLWLKERNPDILTIQEVRAQESDL-RGILPNWNISFDPCS 59

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGD-----------DLDVQARFIEATFTINTQTLRIGN 110
                GVAI SK+ PI + T L  +            L+   R+IEA + I  + + + +
Sbjct: 60  IPGRAGVAIASKFPPIAVRTKLRANKILNPETASEEPLNTSGRWIEADYDIAGKLVTVVS 119

Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170
            Y+  G   T  + +       + +    + L  EE  +  GD+N+     D  N     
Sbjct: 120 CYVYAGEARTIKQEE--KMAFLQAVEKRMKSLVKEEFALVTGDFNVGHTTLDIKNWRGNL 177

Query: 171 NDACFTLEVR-------------QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK 217
           + + F  E R             +              +        Y++W    +++  
Sbjct: 178 DKSGFLPEERAYLDALVGNESDKEYNAGAGQGWIDVVRKIKGGIDGPYTWWSMRGNAFDN 237

Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
           + G RID+   +           ID +     + +DH PV+V  D
Sbjct: 238 DTGWRIDYQFATQRL--KALWVAIDRQKSYAQRWTDHAPVVVKYD 280


>gi|79610414|ref|NP_974691.2| endonuclease/exonuclease/phosphatase family protein [Arabidopsis
           thaliana]
          Length = 610

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 53/352 (15%), Positives = 94/352 (26%), Gaps = 74/352 (21%)

Query: 4   VTVATWNVNSIRARIHNL---AAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           + + T+NVN +R R+         +   + DIIC QETK   +    +   +  Y     
Sbjct: 1   MKIVTYNVNGLRQRVSQFDSLLKLLDSFDADIICFQETKLRRQELTADLAIADGYESFFS 60

Query: 61  GQK-----------------------------------------SYNGVAILSKYQPIEI 79
             +                                         + N     S+   +  
Sbjct: 61  CTRTSEKGRTGYSGVATFCRVKSASSSCETALPVTAEEGITGLVNSNSRGGKSETSTVAE 120

Query: 80  VTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFAS 139
                  +  +           +     + N+Y P      + + + K  +     R   
Sbjct: 121 GLEEYEKEELLMIDQEGRCVITDHGHFVVFNVYGPRAVADDADRIEFKHRFYGVLERRWE 180

Query: 140 QRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH 199
             L     +   GD NI P   D            F    R    +              
Sbjct: 181 CLLRQGRRVFVVGDLNIAPFAMDRCEAGPDFEKNEFRKWFRSLLVERGGSFSDVFRSKHP 240

Query: 200 DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE-------------ATSLLHSARIDTK-- 244
           +    ++ W   + +   N G RIDHI+++                   +    I T+  
Sbjct: 241 ERKDAFTCWSSSSGAEQFNYGSRIDHILVAGSCLHQDEDKQGHSFLACHVKECDILTEYK 300

Query: 245 -------PRGWT-------KPSDHTPVIVSL-DIPEPRKKQQDSTSQNMKPI 281
                  P  W        K SDH PV +S  D+P+  +      +    P+
Sbjct: 301 RFKNENMPTRWKGGLVTKFKGSDHVPVFISFDDLPDIPEHSTPPLASRYLPM 352


>gi|25027245|ref|NP_737299.1| putative exodeoxyribonuclease [Corynebacterium efficiens YS-314]
 gi|259506618|ref|ZP_05749520.1| exodeoxyribonuclease [Corynebacterium efficiens YS-314]
 gi|23492526|dbj|BAC17499.1| putative exodeoxyribonuclease [Corynebacterium efficiens YS-314]
 gi|259165816|gb|EEW50370.1| exodeoxyribonuclease [Corynebacterium efficiens YS-314]
          Length = 331

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 56/297 (18%), Positives = 102/297 (34%), Gaps = 46/297 (15%)

Query: 6   VATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKN----FPFETLQSLN 54
           + T NVN IRA +            W++E+  D++ LQE +  +K+             +
Sbjct: 31  ITTVNVNGIRAAVKERSETNLGFIPWLEESGSDVVLLQEVRASEKDTEKALQPALEAGWH 90

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           Y       K   GV ILS++   ++           +        T     + + +LYLP
Sbjct: 91  YVGAPAAAKGRAGVGILSRHALSDVSIGFGSFLDSGRYIQASIADTTLGVPVTVASLYLP 150

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
            G+   + K D+K  ++  F    ++R      ++  GD+NI  +  D  N    +  + 
Sbjct: 151 SGS-AGTDKQDEKYHFLDEFSEVLAERAATHPHMVIGGDWNICHRREDLKNWKTNQKKSG 209

Query: 175 FTLEVRQSFQKLQNM----------------------------------GFTDAIRATHD 200
           F  + R     +                                      F  A R   +
Sbjct: 210 FLPDERAWMDSVFGCFPDEQSQVVGGGDFFGAVDYVGTAGRREANPDPAWFDVARRLQPE 269

Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257
               Y++W Y   ++  N G RID+   +         + +D       + SDH+P+
Sbjct: 270 GDGPYTWWTYRGKAFDTNAGWRIDYQAATKSMCERAERSWVDKAAAYDLRWSDHSPL 326


>gi|170077908|ref|YP_001734546.1| exodeoxyribonuclease III [Synechococcus sp. PCC 7002]
 gi|169885577|gb|ACA99290.1| exodeoxyribonuclease III [Synechococcus sp. PCC 7002]
          Length = 224

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 71/223 (31%), Positives = 114/223 (51%), Gaps = 4/223 (1%)

Query: 42  DKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLP---GDDLDVQARFIEAT 98
           D +FP +  ++L YH    GQKSYNGVA+LS+    +++       G  +       +  
Sbjct: 3   DPDFPRQPFEALGYHTSISGQKSYNGVALLSREPLQDVIIGFTPVVGAAIAQDFDAQKRV 62

Query: 99  FTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP 158
            +     +R+ NLY+P+G+ + S KYD K+ W +    +  +  + +  ++  GD+NI  
Sbjct: 63  ISGVIGDVRVVNLYVPNGSAVGSEKYDYKLGWFEVLKAYLKELCKDDREILMCGDFNIAL 122

Query: 159 QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN 218
           +  D Y      +    +   R++   + + GF D  R  +     +S+WDY    +S+N
Sbjct: 123 EDRDIY-MPKKPDHIMASPAERETLTAILDFGFQDVFRKFNQEADQFSWWDYRTRGFSRN 181

Query: 219 KGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           +G RIDHI L+ +         ID +PRGW KPSDHTPVIV L
Sbjct: 182 RGWRIDHIYLTEKLYGQAKRCWIDREPRGWEKPSDHTPVIVEL 224


>gi|196014285|ref|XP_002117002.1| hypothetical protein TRIADDRAFT_60990 [Trichoplax adhaerens]
 gi|190580493|gb|EDV20576.1| hypothetical protein TRIADDRAFT_60990 [Trichoplax adhaerens]
          Length = 281

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 63/262 (24%), Positives = 101/262 (38%), Gaps = 50/262 (19%)

Query: 5   TVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFET-LQSLNYHIETCGQ 62
            + +WNVN I+A    N  +++ ++N DIICLQETK  +   P E  L   + +  +  Q
Sbjct: 67  KITSWNVNGIKAWFKKNGHSYLTDSNIDIICLQETKCAESEIPNEIKLDGYHTYFYSAEQ 126

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+   +LSK +P+++   +    L ++ R          + +                
Sbjct: 127 KGYSSTGLLSKVKPLKVTFGITNIILHIKFRTDIEKHDKEGRVITAEYDKFFLVGAYL-- 184

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                                                     NP      A FT E R+ 
Sbjct: 185 -----------------------------------------ANPKTNTKTAGFTKEEREG 203

Query: 183 FQKLQNMGFTDAIRATHDTHH-LYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F KL + GF D  R  +      YSFW Y +++ SKN G R+D+ + S      +  + I
Sbjct: 204 FGKLLDCGFIDTFRHFYPNKTSAYSFWSYMSNARSKNIGWRLDYFVTSKNLIPNVADSII 263

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
            ++  G    SDH P+ + L I
Sbjct: 264 RSEIEG----SDHCPIELLLQI 281


>gi|241745915|ref|XP_002405543.1| ap endonuclease, putative [Ixodes scapularis]
 gi|215505857|gb|EEC15351.1| ap endonuclease, putative [Ixodes scapularis]
          Length = 507

 Score =  140 bits (353), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 59/315 (18%), Positives = 99/315 (31%), Gaps = 42/315 (13%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + +WN+N +R+    +   + E + DIIC QETK         +     Y       +
Sbjct: 1   MKLVSWNINGLRSFKAGVKGLLAELDADIICFQETKATRDVLEETSAIVEGYSAFFSFPR 60

Query: 64  SYNGVA----------------------ILSKYQPIEIVTHLPGDDLDVQA--------- 92
             +G +                        S   P  +  +    D D +          
Sbjct: 61  YQSGYSGVATFCKDAFRPFAAEEGLTELWTSSGCPDSVGFYGDTSDFDSKNISSVDGEGR 120

Query: 93  ---RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLI 149
                         + + + N+Y P  +P    +   K+ + +   R A   L     +I
Sbjct: 121 TVLTLHHVRCGDKLKRIAVINVYCPRADPEKPERGQIKLDFYELLKRRAMTLLRNGLEVI 180

Query: 150 FAGDYNIIPQPHDCYNPIIWENDACFTLEVR---QSFQKLQNMGFTDAIRATHDT-HHLY 205
             GD N   +  D  +P   E+       +           N  F D  R  H T    +
Sbjct: 181 ILGDLNTSHRKIDHCDPSDDEDFDSNPGRIWLSQFLENSTTNTCFHDTYRRLHPTTEKAF 240

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           + W+    +   N G RID+++ SP     L +A I     G    SDH PV        
Sbjct: 241 TCWNTRLGARQTNYGTRIDYVLCSPALVPFLQTADILPHVLG----SDHCPVEAIFRCDG 296

Query: 266 PRKKQQDSTSQNMKP 280
               +  S +    P
Sbjct: 297 VPSPRCPSMATKFWP 311


>gi|15600525|ref|NP_254019.1| catabolite repression control protein [Pseudomonas aeruginosa PAO1]
 gi|107104434|ref|ZP_01368352.1| hypothetical protein PaerPA_01005511 [Pseudomonas aeruginosa PACS2]
 gi|116053479|ref|YP_793806.1| catabolite repression control protein [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|218894435|ref|YP_002443305.1| catabolite repression control protein [Pseudomonas aeruginosa
           LESB58]
 gi|254237974|ref|ZP_04931297.1| catabolite repression control protein [Pseudomonas aeruginosa
           C3719]
 gi|254243782|ref|ZP_04937104.1| catabolite repression control protein [Pseudomonas aeruginosa 2192]
 gi|296392192|ref|ZP_06881667.1| exodeoxyribonuclease III Xth [Pseudomonas aeruginosa PAb1]
 gi|9951651|gb|AAG08717.1|AE004946_1 catabolite repression control protein [Pseudomonas aeruginosa PAO1]
 gi|1079662|gb|AAC44428.1| catabolite repression control protein [Pseudomonas aeruginosa PAO1]
 gi|115588700|gb|ABJ14715.1| catabolite repression control protein [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126169905|gb|EAZ55416.1| catabolite repression control protein [Pseudomonas aeruginosa
           C3719]
 gi|126197160|gb|EAZ61223.1| catabolite repression control protein [Pseudomonas aeruginosa 2192]
 gi|218774664|emb|CAW30481.1| catabolite repression control protein [Pseudomonas aeruginosa
           LESB58]
          Length = 259

 Score =  140 bits (352), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 60/264 (22%), Positives = 108/264 (40%), Gaps = 13/264 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + + NVN I+A     L +W++  N D+ICLQ+T+    +    + Q   Y +  C  
Sbjct: 1   MRIISVNVNGIQAAAERGLLSWLQAQNADVICLQDTRASAFDLDDPSFQLDGYFLYACDA 60

Query: 63  --KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
                 GVA+ S+ QP  +++ L  +  D   R+++A F   +         L       
Sbjct: 61  ELPEQGGVALYSRLQPKAVISGLGFETADRYGRYLQADFDKVS-----IATLLLPSGQSG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI-IWENDACFTLEV 179
               + K  ++  F  + S++       I+ G   +  Q  D  N     +       E 
Sbjct: 116 DESLNQKFKFMDDFTHYLSKQRRKRREYIYCGSLYVAHQKMDVKNWRECQQMPGFLAPER 175

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
               +   N+G+ DA+R        +S+W     +   N G R D+ +L+P     + +A
Sbjct: 176 AWLDEVFGNLGYADALREVSREGDQFSWWPDSEQAEMLNLGWRFDYQVLTPGLRRFVRNA 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
           ++  +PR     S H P+IV  D 
Sbjct: 236 KLPRQPR----FSQHAPLIVDYDW 255


>gi|116669682|ref|YP_830615.1| exodeoxyribonuclease III Xth [Arthrobacter sp. FB24]
 gi|116609791|gb|ABK02515.1| exodeoxyribonuclease III Xth [Arthrobacter sp. FB24]
          Length = 273

 Score =  140 bits (352), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 65/269 (24%), Positives = 109/269 (40%), Gaps = 10/269 (3%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + +A+ NVN +RA   + +A W++    DI+CLQE +  DK       +      E    
Sbjct: 6   LRIASVNVNGLRAAYRNGMAEWLEPREVDILCLQEVRAPDKIVRELLGEGWFVLHEEAEA 65

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT-----QTLRIGNLYLPHGN 117
           K   GVAI S+ +P+    H+  D      R++EA F +         L + + Y+  G 
Sbjct: 66  KGRAGVAIASRTEPLATRPHIGDDYFATAGRWVEADFRLTDAAGAPVQLTVVSAYVHSGE 125

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
              + K DDK  ++        +  +  +  +  GD N+     D  N       A F  
Sbjct: 126 -AGTPKQDDKFRFLDVMENRLPELAKHSDHALVVGDLNVGHTELDIKNWKGNVKRAGFLP 184

Query: 178 EVRQSFQKLQNMGFTDAIRATH---DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
           E R  F +                 +    Y++W     ++  + G RID+ M +P   +
Sbjct: 185 EERAYFDRFFGEDIGWRDVHRGLAGNVDGPYTWWSQRGKAFDTDTGWRIDYHMATPALAA 244

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              SA +D  P   T+ SDH P++V   +
Sbjct: 245 AAISATVDRAPSWDTRFSDHAPLVVDYQL 273


>gi|325846697|ref|ZP_08169612.1| exodeoxyribonuclease III [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325481455|gb|EGC84496.1| exodeoxyribonuclease III [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 275

 Score =  140 bits (352), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 64/280 (22%), Positives = 106/280 (37%), Gaps = 25/280 (8%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTED-------KNFP 46
           + + +WN++S+ A +           ++   I + + DIICLQETK          K   
Sbjct: 1   MKIISWNIDSLNAALTSDSNRAKMSRDVLDTIIKEDADIICLQETKLPRTGPSKKHKQIL 60

Query: 47  FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
                  NY   +  + +    A    +   E    +    LD      +    I  +  
Sbjct: 61  ESYFPQYNYAWISSQEPARKSYAGCLTFYKKEFEPIISYPTLDAPDTMDQEARIITLEFD 120

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
                 +   N  +     D      +      ++L+  +P+I  GD+N+  +  D  +P
Sbjct: 121 NFYLTQVYTPNAGSGLSRLDLRQVWDKKYANYLEKLDQNKPVIACGDFNVAHKEIDLKHP 180

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIRID 224
                 A FT E R  F  L N GF D  R  H D    Y++W      S   N G RID
Sbjct: 181 ENNHKSAGFTDEERSGFTNLLNKGFVDTFRYLHGDVEGKYTWWAQRVKTSKINNSGWRID 240

Query: 225 HIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           + ++S      +  +  ID+  R      DHTP+ +++DI
Sbjct: 241 YFIVSDRIKEKIKESDMIDSGDRQ-----DHTPIYINIDI 275


>gi|149378372|ref|ZP_01896074.1| Exonuclease III [Marinobacter algicola DG893]
 gi|149357337|gb|EDM45857.1| Exonuclease III [Marinobacter algicola DG893]
          Length = 268

 Score =  140 bits (352), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 59/268 (22%), Positives = 98/268 (36%), Gaps = 12/268 (4%)

Query: 4   VTVATWNVNSI-RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + V T +VN + +A       W+   + D++C+Q+ +          L    Y       
Sbjct: 1   MRVVTISVNGLAQAVEKGFFEWLARQDADVVCVQDHRMRAYEIEDFNLIPEGYEAYFIDG 60

Query: 62  -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG---- 116
            +    GV I +++ P  I+     +  D + RFI+A F   +    +    L       
Sbjct: 61  ERNEDGGVGIYTRHFPKAIMYGFANEQADREGRFIQADFDKVSVACVLSPSALGREEELI 120

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN-PIIWENDACF 175
                T  D K  +++ F     + L      IF  +        D        +     
Sbjct: 121 GEDDLTVLDHKDDFMEAFGLHMQKTLRKRRQFIFCANLQTAHHVTDASPLYHKLDFSGFL 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
             E     +    MG  DA R  +   + Y++W   A+   KN GIR+D+ +L+P     
Sbjct: 181 PHERAWLDRLFDEMGCVDAFRDINKQSNQYTWWPEQAEGSRKNAGIRVDYQLLTPGIRKT 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +    ID   R     SDH PVI+  DI
Sbjct: 241 IQDGWIDDSTR----FSDHAPVIMDYDI 264


>gi|152986497|ref|YP_001351424.1| catabolite repression control protein [Pseudomonas aeruginosa PA7]
 gi|150961655|gb|ABR83680.1| catabolite repression control protein [Pseudomonas aeruginosa PA7]
          Length = 259

 Score =  139 bits (351), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 60/264 (22%), Positives = 108/264 (40%), Gaps = 13/264 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + + NVN I+A     L +W++  N D+ICLQ+T+    +    + Q   Y +  C  
Sbjct: 1   MRIISVNVNGIQAAAERGLLSWLQAQNADVICLQDTRASAFDLDDPSFQLDGYFLYACDA 60

Query: 63  --KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
                 GVA+ S+ QP  +++ L  +  D   R+++A F   +         L       
Sbjct: 61  ELPEQGGVALYSRLQPKAVISGLGFETADRYGRYLQADFDKVS-----IATLLLPSGQSG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI-IWENDACFTLEV 179
               + K  ++  F  + S++       I+ G   +  Q  D  N     +       E 
Sbjct: 116 DESLNQKFKFMDDFTHYLSKQRRKRREYIYCGSLYVAHQKLDVKNWRECQQMPGFLAPER 175

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
               +   N+G+ DA+R        +S+W     +   N G R D+ +L+P     + +A
Sbjct: 176 AWLDEVFGNLGYADALREVSREGDQFSWWPDSEQAEMLNLGWRFDYQVLTPGLRRFVRNA 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
           ++  +PR     S H P+IV  D 
Sbjct: 236 KLPRQPR----FSQHAPLIVDYDW 255


>gi|77461766|ref|YP_351273.1| exodeoxyribonuclease III xth [Pseudomonas fluorescens Pf0-1]
 gi|77385769|gb|ABA77282.1| catabolite repression control protein [Pseudomonas fluorescens
           Pf0-1]
          Length = 259

 Score =  139 bits (351), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 64/264 (24%), Positives = 109/264 (41%), Gaps = 13/264 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + + NVN I+A +   L +W++  N D+ICLQ+T+           Q   Y +  C  
Sbjct: 1   MRIISVNVNGIQAAVERGLLSWLQAQNADVICLQDTRASAFELDDPAFQLDGYFLYACDA 60

Query: 62  -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
              +  GVA+ S+ QP  +++ L  +  D   R+++A F   +         L       
Sbjct: 61  EVPAQGGVALYSRLQPKAVISGLGFETADRYGRYLQADFDKVSI-----ATLLLPSGMNG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF-TLEV 179
               + K   +  F ++  ++       I+ G   +  Q  D  N    +    F   E 
Sbjct: 116 DEDLNQKFKLMDDFGKYLDKQRRKRREYIYCGSLYVAQQKLDIKNWRDSQQSPGFLAPER 175

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
               + + NMG+ DA+R        YS+W     +   N G R D+ +L+P     + SA
Sbjct: 176 AWMDEIVGNMGYVDALREVSREGDQYSWWPDNEQAEMLNLGWRFDYQILTPGLRRFVRSA 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
           R+  +PR     S H P+IV  D 
Sbjct: 236 RLPRQPR----FSQHAPLIVDYDW 255


>gi|156398432|ref|XP_001638192.1| predicted protein [Nematostella vectensis]
 gi|156225311|gb|EDO46129.1| predicted protein [Nematostella vectensis]
          Length = 506

 Score =  139 bits (351), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 57/324 (17%), Positives = 100/324 (30%), Gaps = 51/324 (15%)

Query: 4   VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + TWN+N +RA  R   L  ++     D++C QETK         T  +  Y      
Sbjct: 1   MKILTWNINGLRAVTREKKLKDFLNSLEADVMCFQETKITRDMLEEATCMADGYTAFFSF 60

Query: 62  QKSYNGVAILSKYQPIEIV----------------------------THLPGDDLDVQAR 93
            +  +G + ++ +                                  +            
Sbjct: 61  SRVKSGYSGVATFCKDSTTPLAAEEGLTSQLSASPDIGFYGDDEEFTSDQLSRLDSEGRT 120

Query: 94  FIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGD 153
            +      +  T+ I N+Y P  +     +   K+ + +   +     L   + +I  GD
Sbjct: 121 ILTEHTLSSGGTVVIINVYCPRADMENEDRIQFKLEFHRLLSKRVKALLNSGKHVIVLGD 180

Query: 154 YNIIPQPHDCYNPIIWENDACFT---------------LEVRQSFQKLQNMGFTDAIRAT 198
            N   +P D  NP  +E+ + F                     S  K  +    D+ R  
Sbjct: 181 INAAHKPIDHCNPCKYEDFSSFPGRAWLDELLVSLPLPDNSCDSSWKCVSGLLIDSFRYF 240

Query: 199 HDTHHL-YSFWDYYADSWSKNKGIRIDHIMLSPEATSL-LHSARIDTKPRGWTKPSDHTP 256
           H      Y+ W     +   N G RID+I++ P           I  +  G    SDH P
Sbjct: 241 HPLQREAYTNWSTSTGARQTNYGTRIDYILVDPPLLQQEFVDCVIRPEVEG----SDHCP 296

Query: 257 VIVSLDIPEPRKKQQDSTSQNMKP 280
           V+ +L        +         P
Sbjct: 297 VVCTLKNRFLAANKTPLLCTKFMP 320


>gi|145294844|ref|YP_001137665.1| hypothetical protein cgR_0791 [Corynebacterium glutamicum R]
 gi|140844764|dbj|BAF53763.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 304

 Score =  139 bits (351), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 57/296 (19%), Positives = 103/296 (34%), Gaps = 45/296 (15%)

Query: 6   VATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKN----FPFETLQSLN 54
           + + NVN IRA +            W++E  PD++ LQE +  +K+             +
Sbjct: 5   ITSVNVNGIRAAVKQRSETNLGFLPWLEETRPDVVLLQEVRASEKDTATALQPALDNGWH 64

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           Y       K   GV ILS+++  ++           +        T     + + +LYLP
Sbjct: 65  YIGAPAAAKGRAGVGILSRHELEDVNIGFGSFLDSGRYIEATIKDTTLEVPVTVASLYLP 124

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
            G+   + K D+K  ++  F  F  QR +    ++  GD+NI  +  D  N    +  + 
Sbjct: 125 SGS-AGTDKQDEKYRFLDEFEGFLDQRAKERSHMVIGGDWNICHRREDLKNWKTNQKKSG 183

Query: 175 FTLEVRQSFQKLQN---------------------------------MGFTDAIRATHDT 201
           F  + R     +                                     F  A R   + 
Sbjct: 184 FLPDERAFMDSVFGTFPDEATQVAGAGDFFGAVDYEGTRRREATTDPAWFDVARRLQPEG 243

Query: 202 HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257
              Y++W Y   ++    G RID+   +         + +D       + SDH+P+
Sbjct: 244 DGPYTWWTYRGKAFDTGAGWRIDYQAATAAMLERAERSWVDKATAYDLRWSDHSPL 299


>gi|237797784|ref|ZP_04586245.1| exodeoxyribonuclease III [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331020634|gb|EGI00691.1| exodeoxyribonuclease III [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 259

 Score =  139 bits (350), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 63/264 (23%), Positives = 108/264 (40%), Gaps = 13/264 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + + NVN I+A +   L +W++  N D+ICLQ+T+           Q   Y +  C  
Sbjct: 1   MRIISVNVNGIQAAVERGLLSWLQAQNADVICLQDTRASAFELDDPAFQLDGYFLYACEA 60

Query: 62  -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
              +  GVA+ S+ QP  +++ L  +  D   R+++A F   +         L       
Sbjct: 61  EVPAQGGVALYSRLQPKAVISGLGFETADRYGRYLQADFDKVSI-----ATLLFPSGMSG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF-TLEV 179
               + K   +  F ++  ++       I+ G   +  Q  D  N    +    F   E 
Sbjct: 116 DEDLNQKFKLMDDFGKYMDKQRRKRREYIYCGSLYVAQQKLDVKNWRDSQQSPGFLAPER 175

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
               + +  MG+ DA+R        YS+W     +   N G R D+ +L+P     + SA
Sbjct: 176 AWMDEIVGTMGYVDALREVSREGDQYSWWPDNEQAEMLNLGWRFDYQILTPGLRRFVRSA 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
           R+  +PR     S H P+IV  D 
Sbjct: 236 RLPRQPR----FSQHAPLIVDYDW 255


>gi|227875870|ref|ZP_03993996.1| possible exodeoxyribonuclease III [Mobiluncus mulieris ATCC 35243]
 gi|269977505|ref|ZP_06184477.1| exodeoxyribonuclease III [Mobiluncus mulieris 28-1]
 gi|306819151|ref|ZP_07452865.1| exodeoxyribonuclease III [Mobiluncus mulieris ATCC 35239]
 gi|227843618|gb|EEJ53801.1| possible exodeoxyribonuclease III [Mobiluncus mulieris ATCC 35243]
 gi|269934421|gb|EEZ90983.1| exodeoxyribonuclease III [Mobiluncus mulieris 28-1]
 gi|304648127|gb|EFM45438.1| exodeoxyribonuclease III [Mobiluncus mulieris ATCC 35239]
          Length = 289

 Score =  139 bits (350), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 41/289 (14%), Positives = 85/289 (29%), Gaps = 29/289 (10%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + T NVN +RA        W+  ++ ++ CLQE +   ++       + +  +  C  
Sbjct: 1   MKITTVNVNGVRAAFRKGFGDWLANDDSELYCLQEVRATVEDTVTLFGSAFDVRVWPCRI 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K   GVA++++      +                     + + L         G+    +
Sbjct: 61  KGRAGVALVARRDSAFSLGGTREGLPAALYDESGEPDVDSGRWLEAEVSLPGGGSLTLVS 120

Query: 123 KYDDKISWIKRFLRFASQRL------------------ELEEPLIFAGDYNIIPQPHDCY 164
            Y                 L                        +  GD+NI+    D  
Sbjct: 121 AYLHSGELGSEKQEQKLAYLERATKRLSELAATARAAGAGAAQALVCGDFNIVRTERDIK 180

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH----------DTHHLYSFWDYYADS 214
           N     N     ++   +          +                +    Y++W     +
Sbjct: 181 NWKPNHNKVSGVMDEEIAILDTWMSDSLEGTAKHPAVDVTRALLGEVQGPYTWWSQRGKA 240

Query: 215 WSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +  + G RID+ M +P   +      +   P    + SDH P+ ++  I
Sbjct: 241 FDNDAGWRIDYQMATPGLATHAAEVSVWRAPSYAERWSDHAPLSITYQI 289


>gi|146280860|ref|YP_001171013.1| catabolite repression control protein [Pseudomonas stutzeri A1501]
 gi|145569065|gb|ABP78171.1| catabolite repression control protein [Pseudomonas stutzeri A1501]
 gi|327479128|gb|AEA82438.1| catabolite repression control protein [Pseudomonas stutzeri DSM
           4166]
          Length = 259

 Score =  139 bits (350), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 64/264 (24%), Positives = 109/264 (41%), Gaps = 13/264 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + + NVN I+A     L +W++  N D+ICLQ+T+           Q   Y +  C  
Sbjct: 1   MRIISVNVNGIQAAAQRGLLSWLQAQNADVICLQDTRASALELDDPAYQLDGYFLYACDA 60

Query: 62  -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
                 GVA+ S+ QP  ++T L  +  D   R+++A F   +    +            
Sbjct: 61  EIPEQGGVALYSRLQPKAVITGLGFETADRYGRYLQADFDKVSIASLLVP-----SGQGG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF-TLEV 179
               + K+ ++  F  +  ++       I+ G   +  Q  D  N    + D  F   E 
Sbjct: 116 DANLNHKLKFMDDFAHYLDKQRRKRREYIYCGSLYVAHQKLDVKNWRDCQQDPGFLAPER 175

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
               +   NMG+ DA+R  +    L+S+W     +   N G R D+ +L+      + SA
Sbjct: 176 AWLDEIFGNMGYIDALREVNREGDLFSWWPDTEQAEMLNLGWRFDYQILTSGLRRFVRSA 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
           R+  +PR     S H P+IV  D 
Sbjct: 236 RLPRQPR----FSQHAPLIVDYDW 255


>gi|194466723|ref|ZP_03072710.1| exodeoxyribonuclease III Xth [Lactobacillus reuteri 100-23]
 gi|194453759|gb|EDX42656.1| exodeoxyribonuclease III Xth [Lactobacillus reuteri 100-23]
          Length = 253

 Score =  139 bits (350), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 66/258 (25%), Positives = 107/258 (41%), Gaps = 13/258 (5%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +W+VN +++ I H      K  + D  CLQ T+ +    PF+      Y      +
Sbjct: 1   MKFISWSVNGLKSAINHGFVEDFKRQDADFFCLQRTRLDKGEEPFQIPNYYQY-WNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +KY+P  ++  +     D + R I   +        I       G  +   
Sbjct: 60  KGYSGTAIFTKYKPENVIYGMNNSIFDKEGRLITLEYP---NFYLIDVYVPVSGEKLQHL 116

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
            Y        R        L+  +P+I  GD ++  QP D   P    + A FT + R  
Sbjct: 117 DYR---LDWDRAFLDYVTNLQSSKPVIIGGDMSVAYQPIDLAEPTEDHHKAGFTKQERSD 173

Query: 183 FQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F KL + G TD  R  H   H  Y++W Y  D+  +N G R+D+ ++S      +  A+I
Sbjct: 174 FGKLLDAGLTDTFRYLHPNLHGAYTWWSYRYDARERNVGWRLDYFLVSDVWKERIEEAKI 233

Query: 242 DTKPRGWTKPSDHTPVIV 259
            +      K S H P+ +
Sbjct: 234 LSDV----KGSSHCPIEL 247


>gi|221112376|ref|XP_002160726.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
          Length = 511

 Score =  139 bits (350), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 62/334 (18%), Positives = 101/334 (30%), Gaps = 61/334 (18%)

Query: 4   VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + TWN+N IRA  R H+L   +     DIICLQETK               Y+     
Sbjct: 1   MKILTWNINGIRATSRNHSLGNLLDSLEADIICLQETKITRNLLTDHLANVEGYYAFFSF 60

Query: 62  QKSYNGVAILSKYQPIEIVT-------------------HLPGDDLDVQAR--------- 93
            K   G + ++ +    +                         +  +             
Sbjct: 61  SKRKTGYSGVATFCKKTLCPIAAEEGLTGLFTSKMEQVVGFYNNPPEYSDELLRSLDSEG 120

Query: 94  --FIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFA 151
              I    T + Q L I N+Y P  +     ++  K+ + +         +  +  +I  
Sbjct: 121 RCMITEHVTSDGQRLCIINVYCPRADVEEKERFHYKMCFYRLLQMRIISLMREKRNIIVV 180

Query: 152 GDYNIIPQPHDCYNPIIWENDACFTLEV------------------------RQSFQKLQ 187
           GD N+  +  D  +P        F                                +K  
Sbjct: 181 GDLNVSHKRIDSCDPCEICIQIFFFKVELLAVDAVVDLTVDKISEHIQIKGSESFSEKNV 240

Query: 188 NMGFTDAIRATHDTHH-LYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR 246
           N    D  R  H      Y+ W+    +   N G RID I+   +  ++L +  I    +
Sbjct: 241 NNFLVDTFRIFHPNEQNAYTCWNTQTRARETNFGTRIDFILADHQLCTVLTNCVILADVQ 300

Query: 247 GWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
           G    SDH PV+   +I          T     P
Sbjct: 301 G----SDHCPVVADFNILLKASNLIPKTCAAFMP 330


>gi|219122782|ref|XP_002181718.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217406994|gb|EEC46932.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 489

 Score =  139 bits (349), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 63/322 (19%), Positives = 116/322 (36%), Gaps = 61/322 (18%)

Query: 3   VVTVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN---- 54
            + +A+WNV  +RA + N    L+ +++E+N D++CLQETK ++ +     L+       
Sbjct: 166 TMRIASWNVAGLRALMRNSPHALSDFVREHNVDVLCLQETKLQESHLDDPKLKIRGHLLE 225

Query: 55  ------YHIETCGQKSYNGVAIL------------------------------------- 71
                 Y+  +  +K Y+G ++                                      
Sbjct: 226 KEGFDSYYSCSTARKGYSGTSVFVKRRQLIKGSKVAKKQKTLGSYFGKNDERETSSNSLK 285

Query: 72  -----SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY-LPHGNPITSTKYD 125
                S    + +   +       +         ++  +  + N+Y    G  +    Y 
Sbjct: 286 GTEELSIDPHLLVPEGVSFQMNVDKHDSEGRIVVVDFPSFTMCNVYVPNSGQKLERLSYR 345

Query: 126 DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ--PHDCYNPIIWENDACFTLEVRQSF 183
            +            ++ +   P+++ GD N+                  A  T E R SF
Sbjct: 346 TEEWDKDFLSFIQKKQKDRGVPVLWLGDLNVAHTNLEVWNDGAKHLAKQAGVTAEERASF 405

Query: 184 QKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI- 241
           +   N GF DA R  H T    YS+W   A +   NKG+R+D+ +  P          + 
Sbjct: 406 EAQLNAGFIDAFRRLHPTAKGHYSYWSQRAGNREPNKGLRLDYFICDPSLFDEESKTIVR 465

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
           D+      + SDH PV++ L+I
Sbjct: 466 DSYVLPLQQGSDHCPVVLELEI 487


>gi|295425010|ref|ZP_06817719.1| exodeoxyribonuclease III [Lactobacillus amylolyticus DSM 11664]
 gi|295065328|gb|EFG56227.1| exodeoxyribonuclease III [Lactobacillus amylolyticus DSM 11664]
          Length = 275

 Score =  138 bits (348), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 55/280 (19%), Positives = 105/280 (37%), Gaps = 25/280 (8%)

Query: 4   VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTED-------KNFP 46
           + + +WN++S+ A +            +   + +  PD++ +QETK          +   
Sbjct: 1   MKLISWNIDSLNAALTGQSTRALETRKILERLHDEAPDVLAIQETKLPATGPTKKHQTIL 60

Query: 47  FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
            E      Y   +  + +  G A         +        +            I  +  
Sbjct: 61  KEMFPEYKYFWRSSEEPARKGYAGTMYLYKKGLELKASYPKIGAPEPMDSEGRIITLEFP 120

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
                 +   N     K         +      Q+L+ ++P++ +GD+N    P D  +P
Sbjct: 121 TFFVTQVYTPNSGNGLKRLADRQVWDQRYIEYLQQLDKQKPVLASGDFNCAHTPIDLKHP 180

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYY-ADSWSKNKGIRID 224
               + A FT E R+ F +L + GFTD+ R  +     +YS+W      + + N G RID
Sbjct: 181 ENNHHSAGFTDEERKDFTQLLDAGFTDSFRKINGNVEGVYSWWAQRVRTAKANNSGWRID 240

Query: 225 HIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           + + S      +  +  IDT  R      DH P+++ +D+
Sbjct: 241 YWLTSNRIADKIRRSEMIDTGKRA-----DHCPILLDIDL 275


>gi|330901156|gb|EGH32575.1| exonuclease III [Pseudomonas syringae pv. japonica str. M301072PT]
          Length = 219

 Score =  138 bits (348), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 72/219 (32%), Positives = 110/219 (50%), Gaps = 9/219 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +RAR H LAA I ++ PD+I LQETK  D+ FP   +++L YH+   GQK
Sbjct: 1   MKIVSFNINGLRARPHQLAALIDKHQPDVIGLQETKVSDEQFPQAEVEALGYHVHFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122
            + GVA+LS+  P+ +     GDD + Q RFI  T+   N Q + I N Y P G      
Sbjct: 61  GHYGVALLSRNAPLALHKGFEGDDEESQKRFIWGTYADSNGQPVTIMNGYFPQGGSRDHP 120

Query: 123 -KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------DCYNPIIWENDACF 175
            K+  K  + +        +   ++PLI  GD NI PQ        D     +      F
Sbjct: 121 TKFPAKQRFYENLQTLLEGQFRNDQPLIVMGDVNISPQDCDIGIGADNAKRWLKTGKCSF 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYAD 213
             E R+  ++L+N G  D+ R  H      +S++DY + 
Sbjct: 181 LPEEREWMERLKNWGLVDSFRHLHPEVVDRFSWFDYRSR 219


>gi|256545331|ref|ZP_05472695.1| exodeoxyribonuclease III [Anaerococcus vaginalis ATCC 51170]
 gi|256399012|gb|EEU12625.1| exodeoxyribonuclease III [Anaerococcus vaginalis ATCC 51170]
          Length = 275

 Score =  138 bits (348), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 62/280 (22%), Positives = 102/280 (36%), Gaps = 25/280 (8%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTED-------KNFP 46
           +   +WN++S+ A +           ++   I   + D+ICLQETK          +   
Sbjct: 1   MKFISWNIDSLNAALTSDSNRAVMSRDVLKTIISEDADVICLQETKLPRTGPSKKHQKIL 60

Query: 47  FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
            E   S +Y   +  + +    A         + T +    LD      +    I  +  
Sbjct: 61  EEYFPSYDYAWVSSQEPARKSYAGCLTLYKKNLQTKITFPVLDAPDTMDQEARIITLEFE 120

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
           +     +   N                      + L+  + +I  GD+N+  +  D  +P
Sbjct: 121 KFYLTQVYTPNAGNGLNRLGLRQIWDEKFANYLENLDKNKAVIACGDFNVAHKEIDLKHP 180

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIRID 224
                 A FT E R  F  L N GF D  R  H D    Y++W      S   N G RID
Sbjct: 181 ENNHESAGFTDEERNGFTNLLNKGFVDTFRYIHGDVEGKYTWWAQRVKTSKINNSGWRID 240

Query: 225 HIMLSPEATSLLHSA-RIDTKPRGWTKPSDHTPVIVSLDI 263
           + ++S      +  +  ID+  R      DHTP+ +S+DI
Sbjct: 241 YFIVSDRIKDKIKESNMIDSGDRQ-----DHTPIYLSIDI 275


>gi|83648975|ref|YP_437410.1| exonuclease III [Hahella chejuensis KCTC 2396]
 gi|83637018|gb|ABC32985.1| Exonuclease III [Hahella chejuensis KCTC 2396]
          Length = 257

 Score =  138 bits (348), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 59/265 (22%), Positives = 103/265 (38%), Gaps = 13/265 (4%)

Query: 4   VTVATWNVNSI-RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + V T +VN + RA       W+   + D++C+Q+ +        +  +   Y       
Sbjct: 1   MRVVTISVNGLKRAVGEGFFEWMARQDADVVCVQDHRMRVYELDEDKYRPEGYEPYFLDA 60

Query: 63  K--SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           +     GV I ++  P  I+        D+   FI+A F      + I +L +P      
Sbjct: 61  EKLEDGGVGIYTRQIPKAIMMGFSYAPADMNGAFIQADFDA----VSIASLMVPCALMDD 116

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EV 179
             +   K  +++ F     + L      IF G++       D          + F   E 
Sbjct: 117 EKQQA-KEEYLEAFGNHLQKTLRKRRQFIFCGNFQTAHLVTDANPRYHRLEVSGFLPQER 175

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
               Q    M + DA R  +   + Y++W   A+ W K+ G R+D+ + +    S +  A
Sbjct: 176 AWFDQVFDEMQYVDAFRKINREKNQYTWWPESAEGWRKHSGWRVDYQIATQGLRSAIKRA 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIP 264
            IDT+ R     SDH P+IV  D+ 
Sbjct: 236 WIDTETR----FSDHAPLIVDYDVD 256


>gi|146309398|ref|YP_001189863.1| exodeoxyribonuclease III Xth [Pseudomonas mendocina ymp]
 gi|145577599|gb|ABP87131.1| exodeoxyribonuclease III Xth [Pseudomonas mendocina ymp]
          Length = 259

 Score =  138 bits (348), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 68/264 (25%), Positives = 114/264 (43%), Gaps = 13/264 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + + NVN I+A     L +W++  N D+ICLQ+T+        +  Q   Y +  C  
Sbjct: 1   MRIISVNVNGIQAAAERGLLSWLQAQNADVICLQDTRASAFEMDDQAFQLDGYFLYACDG 60

Query: 62  -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
              S  GVA+ S+ QP  +++ L  +  D   R+++A F      + I  L LP G    
Sbjct: 61  EVPSQGGVALYSRLQPKAVISGLGFEMADRYGRYLQADFD----KVSIATLLLPTGR-DG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF-TLEV 179
               + K  ++  F  +  ++       I+ G  ++  Q  D  N    +    F   E 
Sbjct: 116 DESLNQKFKFMDDFTHYLDKQRRKRREYIYCGSLHVAHQKLDVKNWRDCQQSPGFLAPER 175

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
               + + NMG+ DA+R        +S+W     +   N G R D+ +L+P     + SA
Sbjct: 176 AWMDEVVGNMGYVDALREVSREGDQFSWWPDNEQAEMLNLGYRFDYQLLTPGMRRSVRSA 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
           R+  +PR     S H P+IV  D 
Sbjct: 236 RLPRQPR----FSQHAPLIVDYDW 255


>gi|88797191|ref|ZP_01112781.1| catabolite repression control protein [Reinekea sp. MED297]
 gi|88780060|gb|EAR11245.1| catabolite repression control protein [Reinekea sp. MED297]
          Length = 253

 Score =  138 bits (348), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 65/265 (24%), Positives = 115/265 (43%), Gaps = 17/265 (6%)

Query: 4   VTVATWNVNSI-RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC-- 60
           + V T NVN I  A       W++  + D++C+Q+T+ ++   P   L+   Y+      
Sbjct: 1   MKVVTINVNGIVNAAQRGFLQWLEHQDVDVVCVQDTRAKEYQLPEAFLEVPGYNAFFFDA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +  Y G AI S+  P  I+        D+Q  FI+A F      + + ++++P    + 
Sbjct: 61  DEDDYAGTAIYSRTMPKAIIRGFGNPTYDLQGGFIQADFD----NVSVASVWVPPAYYLE 116

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
               D K+ +++   +   +        IFAG Y I  +  D  N    + D  F  E R
Sbjct: 117 DV--DAKLEYLEALQQHLKRTRRKRRDFIFAGSYQIAHRSVDLGNWERHQRDPGFLPEER 174

Query: 181 QSFQKLQN-MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
               +    +GF DA R T+     ++FW +     ++  G R+D+ +++P     +  A
Sbjct: 175 AWMDQAVGPIGFVDAFRLTNKQDRQHTFWPF---DEAQANGSRLDYQLITPNLADFVVEA 231

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIP 264
            I  +PR     S H PV+V  D+ 
Sbjct: 232 TILREPR----MSPHCPVLVEYDMD 252


>gi|330972204|gb|EGH72270.1| exodeoxyribonuclease III [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 259

 Score =  138 bits (348), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 63/264 (23%), Positives = 108/264 (40%), Gaps = 13/264 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + + NVN I+A +   L +W++  N D+ICLQ+T+           Q   Y +  C  
Sbjct: 1   MRIISVNVNGIQAAVERGLLSWLQAQNADVICLQDTRASTFELDDPAFQLDGYFLYACEA 60

Query: 62  -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
              +  GVA+ S+ QP  +++ L  +  D   R+++A F   +         L       
Sbjct: 61  EVPAQGGVALYSRLQPKAVISGLGFETADRYGRYLQADFDKVSI-----ATLLFPSGMNG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF-TLEV 179
               + K   +  F ++  ++       I+ G   +  Q  D  N    +    F   E 
Sbjct: 116 DEDLNQKFKLMDDFGKYMDKQRRKRREYIYCGSLYVAQQKLDIKNWRDSQQSPGFLAPER 175

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
               + +  MG+ DA+R        YS+W     +   N G R D+ +L+P     + SA
Sbjct: 176 AWMDEIVGTMGYVDALREVSREGDQYSWWPDNEQAEMLNLGWRFDYQILTPGLRRFVRSA 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
           R+  +PR     S H P+IV  D 
Sbjct: 236 RLPRQPR----FSQHAPLIVDYDW 255


>gi|307546984|ref|YP_003899463.1| exodeoxyribonuclease III Xth [Halomonas elongata DSM 2581]
 gi|307219008|emb|CBV44278.1| exodeoxyribonuclease III Xth [Halomonas elongata DSM 2581]
          Length = 255

 Score =  138 bits (347), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 55/266 (20%), Positives = 104/266 (39%), Gaps = 19/266 (7%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60
           + +AT NVN IR  +      W+   + D++C+Q  K +        L    Y  +    
Sbjct: 1   MKIATINVNGIREAVGRGFLDWLANQDADVVCVQNLKAKSFELDGSILYPEGYEGYFLDA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            Q  ++GV +  +  P  I+  L     D +ARF++A +        I +  +P G+   
Sbjct: 61  EQDGFSGVGLYCRKIPKAIMYGLGFPQCDHEARFLQADYD----RFSIASFLMPDGSDP- 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
                 K +++ ++  + ++        I  G ++I  +  D  N    +    F  E R
Sbjct: 116 ----AAKQNFMAQYQEYLTKMARKRREYIICGTWHIAHKTIDLENWADNQTTPGFKPEER 171

Query: 181 QSFQKLQNMG-FTDAIRATHDTHHLYSFWD--YYADSWSKNKGIRIDHIMLSPEATSLLH 237
               ++     F D  R  +     Y++W          + +G RID+ ++ P     + 
Sbjct: 172 AWMDQVFGPTGFIDTFREINRDAGEYTWWPALDQDQPRERQEGWRIDYQIVGPNFRRHVV 231

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263
            A ID         S++ P+IV  D+
Sbjct: 232 DAWIDYDAT----FSEYAPLIVEYDL 253


>gi|301114885|ref|XP_002999212.1| DNA-(apurinic or apyrimidinic site) lyase, putative [Phytophthora
           infestans T30-4]
 gi|262111306|gb|EEY69358.1| DNA-(apurinic or apyrimidinic site) lyase, putative [Phytophthora
           infestans T30-4]
          Length = 482

 Score =  138 bits (347), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 56/313 (17%), Positives = 94/313 (30%), Gaps = 58/313 (18%)

Query: 4   VTVATWNVNSIRARIH----NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           + + TWNVN +RA +     NL  +++    DIICLQETK        E ++   +    
Sbjct: 5   LRLVTWNVNGLRAVLQRLEQNLLQFLESLEADIICLQETKLTRSELDEELVRPPGFDAFY 64

Query: 60  CGQKSYNGVA----------------------ILSKYQPIEIVTHLPGDDLDVQARFIEA 97
              +   G +                        +K     + +        +       
Sbjct: 65  SFCRHRGGYSGVVTFVKGDLPTVAAEEGLTGHWQTKDNVGHVGSLHDELPSKILNDLEAE 124

Query: 98  TFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII 157
              I T       L        ++ + + K+ +        +      + +I  GD NI 
Sbjct: 125 GRCIITDHQTFVLLNTYCPALASADRLEYKLQFHGLLEDRVNALRAANKRVIVVGDINIA 184

Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQK-----------------------LQNMGFTDA 194
            +  D  +P    +D     +                                 +   D 
Sbjct: 185 HREIDHCDPHAHRDDGSSFGDHPCRKWMDSFVGVSGEKYLPNPHSDDIVDGEPAVKMIDT 244

Query: 195 IRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253
            R  H      Y+ W+    +   N G RID+I+  P     + S  ID +  G    SD
Sbjct: 245 YRHFHPDQTKAYTCWNTQTGARQTNYGTRIDYILADPTFIECVSSCSIDAERLG----SD 300

Query: 254 HTPV----IVSLD 262
           H PV     V L+
Sbjct: 301 HCPVLMSCTVELE 313


>gi|66043485|ref|YP_233326.1| exodeoxyribonuclease III xth [Pseudomonas syringae pv. syringae
           B728a]
 gi|71737295|ref|YP_272508.1| exodeoxyribonuclease III [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|257481758|ref|ZP_05635799.1| exodeoxyribonuclease III, putative [Pseudomonas syringae pv. tabaci
           ATCC 11528]
 gi|289625444|ref|ZP_06458398.1| exodeoxyribonuclease III Xth [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289646370|ref|ZP_06477713.1| exodeoxyribonuclease III Xth [Pseudomonas syringae pv. aesculi str.
           2250]
 gi|298484823|ref|ZP_07002923.1| Exodeoxyribonuclease III [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|302189243|ref|ZP_07265916.1| exodeoxyribonuclease III Xth [Pseudomonas syringae pv. syringae
           642]
 gi|63254192|gb|AAY35288.1| Exodeoxyribonuclease III xth [Pseudomonas syringae pv. syringae
           B728a]
 gi|71557848|gb|AAZ37059.1| exodeoxyribonuclease III, putative [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|298160677|gb|EFI01698.1| Exodeoxyribonuclease III [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|320322253|gb|EFW78349.1| exodeoxyribonuclease III Xth [Pseudomonas syringae pv. glycinea
           str. B076]
 gi|320331902|gb|EFW87840.1| exodeoxyribonuclease III Xth [Pseudomonas syringae pv. glycinea
           str. race 4]
 gi|330866529|gb|EGH01238.1| exodeoxyribonuclease III [Pseudomonas syringae pv. aesculi str.
           0893_23]
 gi|330873178|gb|EGH07327.1| exodeoxyribonuclease III [Pseudomonas syringae pv. glycinea str.
           race 4]
 gi|330941122|gb|EGH44002.1| exodeoxyribonuclease III [Pseudomonas syringae pv. pisi str. 1704B]
 gi|330952123|gb|EGH52383.1| exodeoxyribonuclease III [Pseudomonas syringae Cit 7]
 gi|330977341|gb|EGH77294.1| exodeoxyribonuclease III [Pseudomonas syringae pv. aptata str. DSM
           50252]
 gi|330986867|gb|EGH84970.1| exodeoxyribonuclease III [Pseudomonas syringae pv. lachrymans str.
           M301315]
          Length = 259

 Score =  138 bits (347), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 63/264 (23%), Positives = 108/264 (40%), Gaps = 13/264 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + + NVN I+A +   L +W++  N D+ICLQ+T+           Q   Y +  C  
Sbjct: 1   MRIISVNVNGIQAAVERGLLSWLQAQNADVICLQDTRASTFELDDPAFQLDGYFLYACEA 60

Query: 62  -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
              +  GVA+ S+ QP  +++ L  +  D   R+++A F   +         L       
Sbjct: 61  EVPAQGGVALYSRLQPKAVISGLGFETADRYGRYLQADFDKVSI-----ATLLFPSGMNG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF-TLEV 179
               + K   +  F ++  ++       I+ G   +  Q  D  N    +    F   E 
Sbjct: 116 DEDLNQKFKLMDDFGKYMDKQRRKRREYIYCGSLYVAQQKLDIKNWRDSQQSPGFLAPER 175

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
               + +  MG+ DA+R        YS+W     +   N G R D+ +L+P     + SA
Sbjct: 176 AWMDEIVGTMGYVDALREVSREGDQYSWWPDNEQAEMLNLGWRFDYQILTPGLRRFVRSA 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
           R+  +PR     S H P+IV  D 
Sbjct: 236 RLPRQPR----FSQHAPLIVDYDW 255


>gi|313887924|ref|ZP_07821603.1| exodeoxyribonuclease III [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312846090|gb|EFR33472.1| exodeoxyribonuclease III [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 275

 Score =  138 bits (347), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 67/283 (23%), Positives = 104/283 (36%), Gaps = 31/283 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTED-------KNFP 46
           + + +WN++SI A +            + A I   +PDII +QETK          K   
Sbjct: 1   MKIISWNIDSINAALTSDSNRAQMSREVLATILREDPDIIAIQETKLPKGGPSKKHKEIL 60

Query: 47  FETLQSLNYHIET---CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
            E     +Y   +     +K Y G     K      VT    D  D              
Sbjct: 61  AEMFADYDYVFVSSEEPARKGYAGNMAFFKKGLEPTVTFPKIDAPDTMDFEGRIITLEFD 120

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                       G  +                      L+  +P+I  GD+N+  +  D 
Sbjct: 121 DFFLTQVYTPNAGGELKRLPLRQIW---DEKYGEYLSSLDEIKPVIATGDFNVAHKEIDL 177

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221
            NP      A FT E RQ F  L + GFTD  R  H D   ++++W      S   N G 
Sbjct: 178 ANPDGNRMSAGFTDEERQGFTNLLDRGFTDTFRHIHGDVEGVFTWWAQRVKTSKINNSGW 237

Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           RID+ ++S     L+  ++ ID+  R      DHTP+++ +++
Sbjct: 238 RIDYFIVSDRIKDLVKDSKMIDSGERQ-----DHTPILLDINL 275


>gi|194228591|ref|XP_001494126.2| PREDICTED: similar to apurinic/apyrimidinic endonuclease 2 [Equus
           caballus]
          Length = 512

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 56/335 (16%), Positives = 103/335 (30%), Gaps = 63/335 (18%)

Query: 3   VVTVATWNVNSIRARIHNLAA------------WIKENNPDIICLQETKTEDKNF--PFE 48
           ++ V +WN+N IR  +  +               + + + DI+CLQETK        P  
Sbjct: 1   MLRVVSWNINGIRRPLQGVCEEPSNCTAMAMGRVLDKLDADIVCLQETKVTRDVLTEPLA 60

Query: 49  TLQSLN-YHIETCGQKSYNGVAILSKYQPIEI------------VTHLPGDDLDVQA--- 92
            ++  N Y   +  +  Y+GVA   K     +                 G   ++     
Sbjct: 61  IIEGYNSYFSFSRNRSGYSGVATFCKDSATPVAAEEGLSGLLATHNGDVGCYGNMDEFTQ 120

Query: 93  ---------------RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF 137
                          +    T     +TL + N+Y PH +P    +   K+ + +     
Sbjct: 121 EELRALDSEGRALLTQHKIRTSEGKEKTLTLINVYCPHADPGKPERLAFKMRFYRLLQTR 180

Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCY-----------NPIIWENDACFTLEVRQSFQKL 186
           A   L     +I  GD N   +P D +               W +        +      
Sbjct: 181 AEALLAAGSHVIILGDLNTAHRPIDHWDAVNLECFEDDPGRKWMDSLLSNPGCQAESHVG 240

Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT-SLLHSARIDTKP 245
             +      +        ++ W   + +   N G R+D+++           ++ +  + 
Sbjct: 241 PFIDSYRCFQP--KQEGAFTCWSVVSGARPLNYGCRLDYVLGDRTLVIDTFQASFLLPEV 298

Query: 246 RGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
            G    SDH PV   L +     KQ         P
Sbjct: 299 MG----SDHCPVGAVLSVSSVPAKQCPPLCTRFLP 329


>gi|307700018|ref|ZP_07637067.1| putative exodeoxyribonuclease III [Mobiluncus mulieris FB024-16]
 gi|307614779|gb|EFN93999.1| putative exodeoxyribonuclease III [Mobiluncus mulieris FB024-16]
          Length = 289

 Score =  137 bits (346), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 47/289 (16%), Positives = 100/289 (34%), Gaps = 29/289 (10%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + T NVN +RA        W+  ++ ++ CLQE +   ++       + +  +  C  
Sbjct: 1   MKITTVNVNGVRAAFRKGFGDWLANDDSELYCLQEVRATVEDTVTLFGSAFDVRVWPCRI 60

Query: 63  KSYNGVAILSKYQPIEIV-----------THLPGDDLDVQARFIEATFTINTQTLRIGNL 111
           K   GVA++++      +               G+      R++EA  ++          
Sbjct: 61  KGRAGVALVARRDSAFSLGDTREGLPAALYDESGEPDVDSGRWLEAEVSLPGGGSLTLVS 120

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRF-------ASQRLELEEPLIFAGDYNIIPQPHDCY 164
              H   + S K + K+++++R  +        A          +  GD+NI+    D  
Sbjct: 121 AYLHSGELESEKQEQKLAYLERATKRLSELAATARAAGAGAAQALVCGDFNIVRTERDIK 180

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH----------DTHHLYSFWDYYADS 214
           N     N     ++   +          +                +    Y++W     +
Sbjct: 181 NWKPNHNKVSGVMDEEIAILDAWMSDSLEGTAKHPAVDVTRALLGEVQGPYTWWSQRGKA 240

Query: 215 WSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +  + G RID+ M +P   +      +   P    + SDH P+ ++  I
Sbjct: 241 FDNDAGWRIDYQMATPGLATHAAEVSVWRAPSYAERWSDHAPLSITYQI 289


>gi|300779721|ref|ZP_07089577.1| possible exodeoxyribonuclease III [Corynebacterium genitalium ATCC
           33030]
 gi|300533831|gb|EFK54890.1| possible exodeoxyribonuclease III [Corynebacterium genitalium ATCC
           33030]
          Length = 301

 Score =  137 bits (346), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 49/305 (16%), Positives = 100/305 (32%), Gaps = 49/305 (16%)

Query: 1   MSVVTVATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           MS +T+A+ NVN IRA           + AW+ +   D++ +QE +  ++        ++
Sbjct: 1   MS-LTIASVNVNGIRAATKVRNESNPGMLAWLTDTTADVVLMQEVRATEEQAQAALAPAI 59

Query: 54  --NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
              +++ T    +     +    +   I         +   RFI  T     +       
Sbjct: 60  DQGWYVYTAPAAAKGRAGVAIASRTPLIDVSCGIPGFEDSGRFIAGTTPGGERV----AS 115

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
                    + K D+K  ++ +F    +   ++   ++  GD+NI  +  D  N    + 
Sbjct: 116 LYLPSGSTGTEKQDEKWQFLDQFEPLLATWPDVYPDMVIGGDWNICHRREDLKNWKTNQK 175

Query: 172 DACFTLEVRQSFQK-----------------------------------LQNMGFTDAIR 196
            + F    R                                             + D  R
Sbjct: 176 SSGFLPGERAFMDSVFGCFPDDEAQDTAAKDEAGFFGAVDYVSDARRSACDEPRWFDVAR 235

Query: 197 ATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTP 256
             H     Y++W Y   +++ + G RID+   +           ++  P    + SDH+P
Sbjct: 236 RLHPEDAPYTWWTYRGQAFNNDAGWRIDYHAATASMLERAERTWVEKAPTVEQRWSDHSP 295

Query: 257 VIVSL 261
           ++V  
Sbjct: 296 LLVEY 300


>gi|330957291|gb|EGH57551.1| exodeoxyribonuclease III [Pseudomonas syringae pv. maculicola str.
           ES4326]
          Length = 259

 Score =  137 bits (346), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 62/264 (23%), Positives = 108/264 (40%), Gaps = 13/264 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + + NVN I+A +   L +W++  N D+ICLQ+T+           Q   Y +  C  
Sbjct: 1   MRIISVNVNGIQAAVERGLLSWLQAQNADVICLQDTRASTFELDDPAFQLDGYFLYACEA 60

Query: 62  -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
              +  GVA+ S+ QP  +++ L  +  D   R+++A F   +         L       
Sbjct: 61  EVPAQGGVALYSRLQPKAVISGLGFEIADRYGRYLQADFDKVSI-----ATLLFPSGMNG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF-TLEV 179
               + K   +  F ++  ++       I+ G   +  Q  D  N    +    F   E 
Sbjct: 116 DEDLNQKFKLMDDFGKYMDKQRRKRREYIYCGSLYVAQQKLDIKNWRDSQQSPGFLAPER 175

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
               + +  MG+ D++R        YS+W     +   N G R D+ +L+P     + SA
Sbjct: 176 AWMDEIVGTMGYVDSLREVSREGDQYSWWPDNEQAEMLNLGWRFDYQILTPGLRRFVRSA 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
           R+  +PR     S H P+IV  D 
Sbjct: 236 RLPRQPR----FSQHAPLIVDYDW 255


>gi|300857881|ref|YP_003782864.1| hypothetical protein cpfrc_00464 [Corynebacterium
           pseudotuberculosis FRC41]
 gi|300685335|gb|ADK28257.1| hypothetical protein cpfrc_00464 [Corynebacterium
           pseudotuberculosis FRC41]
 gi|302205608|gb|ADL09950.1| Putative exodeoxyribonuclease [Corynebacterium pseudotuberculosis
           C231]
 gi|302330161|gb|ADL20355.1| Putative exodeoxyribonuclease [Corynebacterium pseudotuberculosis
           1002]
 gi|308275844|gb|ADO25743.1| Putative exodeoxyribonuclease [Corynebacterium pseudotuberculosis
           I19]
          Length = 299

 Score =  137 bits (346), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 59/299 (19%), Positives = 107/299 (35%), Gaps = 42/299 (14%)

Query: 4   VTVATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKNFPFETLQSL--N 54
           + + T NVN IRA +         +  W+  +  D++ LQE +  +K+       +L   
Sbjct: 1   MQITTVNVNGIRAAVKERSETNKGMLPWLDGSGSDVVLLQEVRASEKDTLTALAPALDAG 60

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           +H       +     +    +      H+  +  +   R+I+AT    T  + +G+LYLP
Sbjct: 61  WHYVGAPAAAKGRAGVGILSRSELFDVHVGIEGFEDSGRYIQATLHDGTDDVTVGSLYLP 120

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
            G+  T    D+K  ++  F  F  Q  +  + ++  GD+NI  +  D  N       + 
Sbjct: 121 SGSAQTEK-QDEKYRFLDVFEPFLEQAAKDHKYMVIGGDWNICHRREDLKNWKTNRKKSG 179

Query: 175 FTLEVRQSFQKLQ--------------------------------NMGFTDAIRATHDTH 202
           F  + R     +                                 N  + D  R  H   
Sbjct: 180 FLPDERAFMDSVFGTFPDAASQVEDAGQWAGAVDYASDGKRKPALNPQWFDVARRLHPQD 239

Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
             Y++W Y   ++  N G RID+   +           +D       + SDH+P+ V  
Sbjct: 240 APYTWWTYRGQAFDTNAGWRIDYQAATQAMLDRAEKTWVDKAEAYDLRWSDHSPLSVIY 298


>gi|226942449|ref|YP_002797522.1| catabolite repression control protein Crc [Azotobacter vinelandii
           DJ]
 gi|226717376|gb|ACO76547.1| catabolite repression control protein; Crc [Azotobacter vinelandii
           DJ]
          Length = 259

 Score =  137 bits (346), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 68/264 (25%), Positives = 112/264 (42%), Gaps = 13/264 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + + NVN I+A +   L +W++  N D+ICLQ+T+         T Q   Y + T   
Sbjct: 1   MRIISVNVNGIQAAVERGLLSWLQAQNADVICLQDTRASAFELDDPTYQLDGYFLYTSEA 60

Query: 62  -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
              S  GVA+ S+ QP  ++  L  +  D   R+++A F   +         L       
Sbjct: 61  EVPSQGGVALYSRLQPKAVIGGLGFETADRYGRYLQADFDKVSI-----ATLLLPSGQGG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF-TLEV 179
               + K  ++  F R+  ++       I+ G   +  Q  D  N    +    F   E 
Sbjct: 116 DESLNQKFKFMDDFARYLEKQRRKRREYIYCGSLYVAHQKQDVKNWRDCQQLPGFLAPER 175

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
               Q + +MG+ DA+R T     LYS+W     +   N G R D+ +L+P     + +A
Sbjct: 176 AWMDQIIGHMGYVDALRETSREGDLYSWWPDSEQAEMLNLGWRFDYQLLTPGMRRFVRNA 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
           R+  +PR     S H P+IV  D 
Sbjct: 236 RLPRQPR----FSQHAPLIVDYDW 255


>gi|296235588|ref|XP_002762961.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase 2 [Callithrix
           jacchus]
          Length = 518

 Score =  137 bits (346), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 62/335 (18%), Positives = 107/335 (31%), Gaps = 62/335 (18%)

Query: 3   VVTVATWNVNSIRARIHNLA-------------AWIKENNPDIICLQETKTEDKNF--PF 47
           ++ V +WN+N IR  +  +A               + E + DI+CLQETK        P 
Sbjct: 1   MLRVVSWNINGIRRPLQGMANQEPNNCAAVAVGRILDELDADIVCLQETKVTRDALTEPL 60

Query: 48  ETLQSLN-YHIETCGQKSYNGVAILSKYQPIEI---------------VTHLPGDDLDVQ 91
             ++  N Y   +  +  Y+GVA   K     +                    G+  +  
Sbjct: 61  AIVEGYNSYFSFSRNRSGYSGVATFCKDSATPVAAEEGLSGLFATQNGDVGCYGNMDEFT 120

Query: 92  A---------------RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
                           +    T+    +TL + N+Y PH +P    +   K+ + +    
Sbjct: 121 QEELRALDSEGRALLTQHKIRTWEGKERTLTLINVYCPHADPGRPERLVFKMRFYRLLQI 180

Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTD--- 193
            A   L     +I  GD N   +P D ++ +            +     L N+G      
Sbjct: 181 RAEALLAAGSHVIILGDLNTAHRPIDHWDSV-NLECFEEDPGRKWMDGLLSNLGCQSASH 239

Query: 194 -------AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT-SLLHSARIDTKP 245
                             ++ W     +   N G RID+++           ++ +  + 
Sbjct: 240 VGPFIDSYRCFQPKQEGAFTCWSAVTGARHLNYGSRIDYVLGDRTLVIDTFQASFLLPEV 299

Query: 246 RGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
            G    SDH PV   L +     KQ  S      P
Sbjct: 300 MG----SDHCPVGAVLSVSSVPAKQCPSLCTRFLP 330


>gi|92115320|ref|YP_575248.1| exodeoxyribonuclease III [Chromohalobacter salexigens DSM 3043]
 gi|91798410|gb|ABE60549.1| exodeoxyribonuclease III [Chromohalobacter salexigens DSM 3043]
          Length = 255

 Score =  137 bits (346), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 54/266 (20%), Positives = 108/266 (40%), Gaps = 19/266 (7%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60
           + +A+ NVN IR  +      W+   + D++C+Q  K +        L    Y  +    
Sbjct: 1   MKIASINVNGIREAVGRGFLDWLANQDADVVCVQNLKAKSFELDDSILFPEGYEGYFLDA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +  ++GV +  +  P  I+  L     D +ARF++A +        I +  +P G+   
Sbjct: 61  EEDGFSGVGLYCRTIPKAIMYGLGFPQCDNEARFLQADYE----RFSIASFLMPDGS--- 113

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
               + K +++ ++  + S+ +      I  G ++I  +  D  N    +    F  E R
Sbjct: 114 --DLEAKQAFMNQYQEYLSKMVRKRREYIICGTWHIAHKTIDLANWADNQTTPGFRPEER 171

Query: 181 QSFQKLQN-MGFTDAIRATHDTHHLYSFWDYYADS--WSKNKGIRIDHIMLSPEATSLLH 237
               ++   MG+ D  R  +   + Y++W         ++ +G R+D+ ++ PE    + 
Sbjct: 172 AWMDQVFGPMGYIDTFREVNRDANQYTWWPKLDQDVPRARQEGWRLDYQIVGPEFRRHVV 231

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263
            A ID             P+IV  D+
Sbjct: 232 DAWIDRDATFSEF----APLIVEYDL 253


>gi|296470685|gb|DAA12800.1| DNA-(apurinic or apyrimidinic site) lyase 2 [Bos taurus]
          Length = 514

 Score =  137 bits (346), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 56/335 (16%), Positives = 103/335 (30%), Gaps = 62/335 (18%)

Query: 3   VVTVATWNVNSIRARIHNLA-------------AWIKENNPDIICLQETKTEDKNF--PF 47
           ++ + +WN+N IR+ +  +                + + + DI+CLQETK        P 
Sbjct: 1   MLRLVSWNINGIRSPLQGVRCEEPSSCSAMAMGRILDKLDADIVCLQETKVTRDVLTEPL 60

Query: 48  ETLQSLN-YHIETCGQKSYNGVAILSKYQPIEI---------------VTHLPGDDLDVQ 91
             ++  N Y   +  +  Y+GVA   K     +                    G+  D  
Sbjct: 61  AIIEGYNSYFSFSRNRSGYSGVATFCKDSATPVAAEEGLSGLLSTQNGDVGCYGNMDDFT 120

Query: 92  A---------------RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
                           +    T+    +TL + N+Y PH +P    +   K+ + +    
Sbjct: 121 QEELRALDSEGRALLTQHKICTWEGKEKTLTLINVYCPHADPGKPERLTFKMRFYRLLQI 180

Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF----------QKL 186
            A   L     +I  GD N   +P D ++  +           +                
Sbjct: 181 RAEALLAAGSHVIILGDLNTAHRPIDHWD-AVNMECFEEDPGRKWMDGLLSNLGCESGSH 239

Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT-SLLHSARIDTKP 245
                             ++ W   + +   N G R+D+++           S+ +  + 
Sbjct: 240 MGPFIDSYRCFQPKQKGAFTCWSTVSGARHLNYGSRLDYVLGDRTLVIDTFQSSFLLPEV 299

Query: 246 RGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
            G    SDH PV   L +     KQ         P
Sbjct: 300 MG----SDHCPVGAVLSVSSVPAKQCPPLCTCFLP 330


>gi|61554419|gb|AAX46554.1| apurinic/apyrimidinic endonuclease 2 [Bos taurus]
          Length = 407

 Score =  137 bits (346), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 56/335 (16%), Positives = 103/335 (30%), Gaps = 62/335 (18%)

Query: 3   VVTVATWNVNSIRARIHNLA-------------AWIKENNPDIICLQETKTEDKNF--PF 47
           ++ + +WN+N IR+ +  +                + + + DI+CLQETK        P 
Sbjct: 1   MLRLVSWNINGIRSPLQGVRCEEPSSCSAMAMGRILDKLDADIVCLQETKVTRDVLTEPL 60

Query: 48  ETLQSLN-YHIETCGQKSYNGVAILSKYQPIEI---------------VTHLPGDDLDVQ 91
             ++  N Y   +  +  Y+GVA   K     +                    G+  D  
Sbjct: 61  AIIEGYNSYFSFSRNRSGYSGVATFCKDSATPVAAEEGLSGLLSTQNGDVGCYGNMDDFT 120

Query: 92  A---------------RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
                           +    T+    +TL + N+Y PH +P    +   K+ + +    
Sbjct: 121 QEELRALDSEGRALLTQHKICTWEGKEKTLTLINVYCPHADPGKPERLTFKMRFYRLLQI 180

Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF----------QKL 186
            A   L     +I  GD N   +P D ++  +           +                
Sbjct: 181 RAEALLAAGSHVIILGDLNTAHRPIDHWD-AVNMECFEEDPGRKWMDGLLSNLGCESGSH 239

Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT-SLLHSARIDTKP 245
                             ++ W   + +   N G R+D+++           S+ +  + 
Sbjct: 240 MGPFIDSYRCFQPKQKGAFTCWSTVSGARHLNYGSRLDYVLGDRTLVIDTFQSSFLLPEV 299

Query: 246 RGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
            G    SDH PV   L +     KQ         P
Sbjct: 300 MG----SDHCPVGAVLSVSSVPAKQCPPLCTCFLP 330


>gi|62751813|ref|NP_001015577.1| DNA-(apurinic or apyrimidinic site) lyase 2 [Bos taurus]
 gi|73921675|sp|Q5E9N9|APEX2_BOVIN RecName: Full=DNA-(apurinic or apyrimidinic site) lyase 2; AltName:
           Full=APEX nuclease 2; AltName:
           Full=Apurinic-apyrimidinic endonuclease 2; Short=AP
           endonuclease 2
 gi|59858127|gb|AAX08898.1| apurinic/apyrimidinic endonuclease 2 [Bos taurus]
          Length = 514

 Score =  137 bits (346), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 56/335 (16%), Positives = 103/335 (30%), Gaps = 62/335 (18%)

Query: 3   VVTVATWNVNSIRARIHNLA-------------AWIKENNPDIICLQETKTEDKNF--PF 47
           ++ + +WN+N IR+ +  +                + + + DI+CLQETK        P 
Sbjct: 1   MLRLVSWNINGIRSPLQGVRCEEPSSCSAMAMGRILDKLDADIVCLQETKVTRDVLTEPL 60

Query: 48  ETLQSLN-YHIETCGQKSYNGVAILSKYQPIEI---------------VTHLPGDDLDVQ 91
             ++  N Y   +  +  Y+GVA   K     +                    G+  D  
Sbjct: 61  AIIEGYNSYFSFSRNRSGYSGVATFCKDSATPVAAEEGLSGLLSTQNGDVGCYGNMDDFT 120

Query: 92  A---------------RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
                           +    T+    +TL + N+Y PH +P    +   K+ + +    
Sbjct: 121 QEELRALDSEGRALLTQHKICTWEGKEKTLTLINVYCPHADPGKPERLTFKMRFYRLLQI 180

Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF----------QKL 186
            A   L     +I  GD N   +P D ++  +           +                
Sbjct: 181 RAEALLAAGSHVIILGDLNTAHRPIDHWD-AVNMECFEEDPGRKWMDGLLSNLGCESGSH 239

Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT-SLLHSARIDTKP 245
                             ++ W   + +   N G R+D+++           S+ +  + 
Sbjct: 240 MGPFIDSYRCFQPKQKGAFTCWSTVSGARHLNYGSRLDYVLGDRTLVIDTFQSSFLLPEV 299

Query: 246 RGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
            G    SDH PV   L +     KQ         P
Sbjct: 300 MG----SDHCPVGAVLSVSSVPAKQCPPLCTCFLP 330


>gi|254515845|ref|ZP_05127905.1| exodeoxyribonuclease III [gamma proteobacterium NOR5-3]
 gi|219675567|gb|EED31933.1| exodeoxyribonuclease III [gamma proteobacterium NOR5-3]
          Length = 253

 Score =  137 bits (345), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 61/264 (23%), Positives = 102/264 (38%), Gaps = 15/264 (5%)

Query: 4   VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + +++ + +R A       W+   + D IC+Q+ +  + +   +     +Y+      
Sbjct: 1   MRIISFSADGLREAAKRGFYDWLARQDADFICIQDIRCSEYDLQDDVFFPSDYNAYFFDD 60

Query: 62  -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
                NGVAI  +  P  I+T L   D D+Q R+I+A +      L IG L  P  +   
Sbjct: 61  VNGKDNGVAIYCRTLPKAIMTGLGFADFDMQGRYIQADYG----ELSIGCLLAPVASDGN 116

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
           + +   K  +         +        +  G++ I     D  N     N + F  E R
Sbjct: 117 ADEQTTKNEFFSLLGAHLEKVRNKRRKFVICGNWRIAHTAADMQNSAENSNRSGFLPEER 176

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           Q   +L + G+ DA R        Y++W           G RID  ++S E    +  A 
Sbjct: 177 QWIDELLDSGYRDAFRQVSTDSDAYTYWPRERG----EDGWRIDLQIISEELQYSVEHAA 232

Query: 241 IDTKPRGWTKPSDHTPVIVSLDIP 264
           I T        S H PVI+  DI 
Sbjct: 233 IYT----GESFSRHAPVIIDYDID 252


>gi|330964254|gb|EGH64514.1| exodeoxyribonuclease III [Pseudomonas syringae pv. actinidiae str.
           M302091]
          Length = 259

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 62/264 (23%), Positives = 106/264 (40%), Gaps = 13/264 (4%)

Query: 4   VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60
           + + + NVN I+ A    L +W++  N D+ICLQ+T+           Q   Y  +    
Sbjct: 1   MRIISVNVNGIQGAVERGLLSWLQAQNADVICLQDTRASAFELDDPAFQLDGYFLYAYEA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
              +  GVA+ S+ QP  +++ L  +  D   R+++A F   +         L       
Sbjct: 61  EVPAQGGVALYSRLQPKAVISGLGFETADRYGRYLQADFDKVSI-----ATLLFPSGMNG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF-TLEV 179
               + K   +  F ++  ++       I+ G   +  Q  D  N    +    F   E 
Sbjct: 116 DEDLNQKFKLMDDFGKYMDKQRRKRREYIYCGSLYVAQQKLDIKNWRDSQQSPGFLAPER 175

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
               + +  MG+ DA+R        YS+W     +   N G R D+ +L+P     + SA
Sbjct: 176 AWMDEIVGTMGYVDALREVSREGDQYSWWPDNEQAEMLNLGWRFDYQILTPGLRRFVRSA 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
           R+  +PR     S H P+IV  D 
Sbjct: 236 RLPRQPR----FSQHAPLIVDYDW 255


>gi|311114963|ref|YP_003986184.1| exodeoxyribonuclease III [Gardnerella vaginalis ATCC 14019]
 gi|310946457|gb|ADP39161.1| exodeoxyribonuclease III [Gardnerella vaginalis ATCC 14019]
          Length = 290

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 56/291 (19%), Positives = 98/291 (33%), Gaps = 29/291 (9%)

Query: 1   MSVV-TVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           M ++ T+ T N+N IRA     +  W++++ PD+ C+QE +           +  + +  
Sbjct: 1   MELMITITTSNLNGIRAAWRKGMLDWVQDHTPDVWCMQEVRAPQDAIDPIMSKIKDLYTS 60

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT-------------------- 98
             G+   N     S    I  +    G  L      +E                      
Sbjct: 61  KSGESGQNDRRF-SVTNQICEIKGRAGVALVTTLPVVEQRYGLPGLSEDVDSGRWVETDV 119

Query: 99  FTINTQTLRIGNLYLPHGNPIT----STKYDDKISWIKRFLRFASQRLELEEPLIFAGDY 154
            T     + + ++Y+  GN         K+    + +KR               I  GD+
Sbjct: 120 HTPQGYDITVASVYVHAGNVDDPQKMQQKFRFLDTMLKRLGELRDIAASGGNQAILCGDF 179

Query: 155 NIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYA 212
           NI   P D  N    E  A F  E R    +  N      +      D    Y++W    
Sbjct: 180 NIAHTPLDIKNAKANEKSAGFLPEERAYIDRWINEYEFVDVMRMLAGDIQGPYTWWSQRG 239

Query: 213 DSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            ++  N G R+D+   +PE         ID      ++ SDH  + +  ++
Sbjct: 240 KAFDNNVGWRLDYQFATPEIAETACGFVIDRAQSYDSRWSDHAALNIKYNV 290


>gi|89093847|ref|ZP_01166793.1| catabolite repression control protein [Oceanospirillum sp. MED92]
 gi|89081977|gb|EAR61203.1| catabolite repression control protein [Oceanospirillum sp. MED92]
          Length = 255

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 57/264 (21%), Positives = 111/264 (42%), Gaps = 13/264 (4%)

Query: 4   VTVATWNVNSI-RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC-- 60
           + V T+N   I +A  +    W+ + + D++C+Q+ + ++     E      Y+      
Sbjct: 1   MRVITFNAQGIEQATDNGFFDWMVQQDADVVCIQDLRAKEYQLDDERYHPEGYYPYFFDA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +  Y+GVAI S+  P  I+T L  +  D   RFI+A F   +      + +       +
Sbjct: 61  WEDGYSGVAIYSRDIPKAIMTGLGFELCDQHGRFIQADFEHVSV-----SSFCVPSGLKS 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EV 179
                +K  ++  F+   ++ L      IF G  +I  +P D  N    +  + F   E 
Sbjct: 116 EEAQAEKEQFMTDFMGHLNKTLRKRREFIFCGTTHIAHKPVDLSNWYANQTVSGFLPQER 175

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
               +    MG+ DA R  +     +S+W  Y  +   N+G R+D+ + +      + +A
Sbjct: 176 EWMAEIFDEMGYVDAFRQINKAERQFSWWPDYNRARKLNEGARLDYQITTANLRKNVKNA 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
           ++          S+H P+I+  +I
Sbjct: 236 QVYRDEM----FSEHAPLIIDYEI 255


>gi|120553484|ref|YP_957835.1| exodeoxyribonuclease III Xth [Marinobacter aquaeolei VT8]
 gi|120323333|gb|ABM17648.1| exodeoxyribonuclease III Xth [Marinobacter aquaeolei VT8]
          Length = 268

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 55/268 (20%), Positives = 97/268 (36%), Gaps = 12/268 (4%)

Query: 4   VTVATWNVNSI-RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + V + +VN + +A       W+ E + D++C+Q+ +          L    Y       
Sbjct: 1   MRVVSISVNGLEQAVEKGFFDWLAEQDADVVCVQDHRMRAYEIEDRNLIPEGYEAYFIDG 60

Query: 63  --KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG---- 116
               + GV I +++ P  I+     +  D + RFI+A F   +    +    L       
Sbjct: 61  ELNEHGGVGIYTRHFPKAIMYGFANEQADREGRFIQADFDKVSVACVLAPCALGREEELI 120

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN-DACF 175
                T  D K  +++ F     + L      I   +        D        +     
Sbjct: 121 GEDDLTVLDHKDEFMEAFGIHMQKTLRKRRQFILCANLQTAHHVTDASPLYHKTDFSGFL 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
             E     +    MG  DA R  +   + +++W    +   K  GIR+D+ +L+P     
Sbjct: 181 PHERAWLDRLFDEMGCIDAFREINKQSNQFTWWPEQTEGSRKKAGIRVDYHLLTPGIRKT 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +    ID + R     SDH PVI+  DI
Sbjct: 241 IRDGWIDDETR----FSDHAPVIMDYDI 264


>gi|268569472|ref|XP_002640531.1| C. briggsae CBR-EXO-3 protein [Caenorhabditis briggsae]
 gi|187024770|emb|CAP36093.1| CBR-EXO-3 protein [Caenorhabditis briggsae AF16]
          Length = 290

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 72/266 (27%), Positives = 121/266 (45%), Gaps = 21/266 (7%)

Query: 5   TVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH-----I 57
               WNV  +RA +     +  +KE  PDI+ L ETK ++  +P E  +    +     I
Sbjct: 37  KFVCWNVAGLRACVKKSDFSEILKEQ-PDIVFLGETKCKE--WPNEIEEKFKDYSKTLVI 93

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
            T     Y GV +LSK  P++I   +   + D   R I A F    +   +G+     G 
Sbjct: 94  STEKNGGYAGVGMLSKVAPLKIHKGIGDPEFDTAGRLIIAEFV---EFFFVGSYVPNSGA 150

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND-ACFT 176
            + +    +K    +  L    + + + +P+I+ GD N+  +  D  NP    N  A FT
Sbjct: 151 KLVNL---EKRGRWEALLTEKLKSMTMTKPVIYGGDLNVAHEEIDLKNPESNRNKTAGFT 207

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
            + R  F ++  MGFTD  R  H     Y+FW Y A++  K+ G R+D+ ++S      +
Sbjct: 208 DQERGWFTEMLEMGFTDTFRKMHPEEKKYTFWSYLANAREKDVGWRLDYYVVSDRIMEKV 267

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLD 262
             + I +      K SDH P+++ ++
Sbjct: 268 KKSEIMSDV----KGSDHAPIVLHIE 289


>gi|308234996|ref|ZP_07665733.1| putative exodeoxyribonuclease III [Gardnerella vaginalis ATCC
           14018]
          Length = 287

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 55/288 (19%), Positives = 97/288 (33%), Gaps = 28/288 (9%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++T+ T N+N IRA     +  W++++ PD+ C+QE +           +  + +    G
Sbjct: 1   MITITTSNLNGIRAAWRKGMLDWVQDHTPDVWCMQEVRAPQDAIDPIMSKIKDLYTSKSG 60

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT--------------------FTI 101
           +   N     S    I  +    G  L      +E                       T 
Sbjct: 61  ESGQNDRRF-SVTNQICEIKGRAGVALVTTLPVVEQRYGLPGLSEDVDSGRWVETDVHTP 119

Query: 102 NTQTLRIGNLYLPHGNPIT----STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII 157
               + + ++Y+  GN         K+    + +KR               I  GD+NI 
Sbjct: 120 QGYDITVASVYVHAGNVDDPQKMQQKFRFLDTMLKRLGELRDIAASGGNQAILCGDFNIA 179

Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSW 215
             P D  N    E  A F  E R    +  N      +      D    Y++W     ++
Sbjct: 180 HTPLDIKNAKANEKSAGFLPEERAYIDRWINEYEFVDVMRMLAGDIQGPYTWWSQRGKAF 239

Query: 216 SKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             N G R+D+   +PE         ID      ++ SDH  + +  ++
Sbjct: 240 DNNVGWRLDYQFATPEIAETACGFVIDRAQSYDSRWSDHAALNIKYNV 287


>gi|26991968|ref|NP_747393.1| exodeoxyribonuclease III Xth [Pseudomonas putida KT2440]
 gi|148550400|ref|YP_001270502.1| exodeoxyribonuclease III Xth [Pseudomonas putida F1]
 gi|167036327|ref|YP_001671558.1| exodeoxyribonuclease III Xth [Pseudomonas putida GB-1]
 gi|325272060|ref|ZP_08138497.1| exodeoxyribonuclease III Xth [Pseudomonas sp. TJI-51]
 gi|24987098|gb|AAN70857.1|AE016730_3 catabolite repression control protein [Pseudomonas putida KT2440]
 gi|148514458|gb|ABQ81318.1| exodeoxyribonuclease III Xth [Pseudomonas putida F1]
 gi|166862815|gb|ABZ01223.1| exodeoxyribonuclease III Xth [Pseudomonas putida GB-1]
 gi|324102806|gb|EGC00216.1| exodeoxyribonuclease III Xth [Pseudomonas sp. TJI-51]
          Length = 259

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 62/264 (23%), Positives = 106/264 (40%), Gaps = 13/264 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + + NVN I+A     L +W++  N D+ICLQ+T+           Q   Y +  C  
Sbjct: 1   MRIISVNVNGIQAAAERGLLSWLQAQNADVICLQDTRASAFELDDPAFQLDGYFLYACDA 60

Query: 62  -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
              +  GVA+ S+ QP  ++T L  +  D   R+++A F   +    +            
Sbjct: 61  EVPAQGGVALYSRMQPKAVITGLGFETADRYGRYLQADFDKVSIASLL-----LPSGMNG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF-TLEV 179
               + K   +  F ++  ++       I+ G + +  Q  D  N    +    F   E 
Sbjct: 116 DEDLNQKFKLMDDFAKYLDKQRRKRREYIYCGSFYVAQQKLDIKNWRDSQQSPGFLAPER 175

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
                    MG+ DA+R        YS+W     +   N G R D+ +L+P     + +A
Sbjct: 176 AWMDAITGEMGYVDALREVSREGDQYSWWPDNEQAEMLNLGYRFDYQILTPGLRRFVRNA 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
           R+  +PR     S H P+IV  D 
Sbjct: 236 RLPRQPR----FSQHAPLIVDYDW 255


>gi|313501266|gb|ADR62632.1| Crc [Pseudomonas putida BIRD-1]
          Length = 263

 Score =  137 bits (344), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 62/264 (23%), Positives = 106/264 (40%), Gaps = 13/264 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + + NVN I+A     L +W++  N D+ICLQ+T+           Q   Y +  C  
Sbjct: 5   MRIISVNVNGIQAAAERGLLSWLQAQNADVICLQDTRASAFELDDPAFQLDGYFLYACDA 64

Query: 62  -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
              +  GVA+ S+ QP  ++T L  +  D   R+++A F   +    +            
Sbjct: 65  EVPAQGGVALYSRMQPKAVITGLGFETADRYGRYLQADFDKVSIASLL-----LPSGMNG 119

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF-TLEV 179
               + K   +  F ++  ++       I+ G + +  Q  D  N    +    F   E 
Sbjct: 120 DEDLNQKFKLMDDFAKYLDKQRRKRREYIYCGSFYVAQQKLDIKNWRDSQQSPGFLAPER 179

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
                    MG+ DA+R        YS+W     +   N G R D+ +L+P     + +A
Sbjct: 180 AWMDAITGEMGYVDALREVSREGDQYSWWPDNEQAEMLNLGYRFDYQILTPGLRRFVRNA 239

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
           R+  +PR     S H P+IV  D 
Sbjct: 240 RLPRQPR----FSQHAPLIVDYDW 259


>gi|291239611|ref|XP_002739716.1| PREDICTED: apurinic/apyrimidinic endonuclease 2-like [Saccoglossus
           kowalevskii]
          Length = 541

 Score =  137 bits (344), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 62/343 (18%), Positives = 98/343 (28%), Gaps = 70/343 (20%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPF--ETLQSLN-YHIETC 60
           + + TWN+N IRA    L + +     DIICLQETK            ++  N Y   + 
Sbjct: 1   MRILTWNINGIRAAKKPLKSLLDSLEADIICLQETKVTRDQLDEANAVVEGYNSYFSFSK 60

Query: 61  GQKSYNGVAILSKYQPIE------------------IVTHLPGDDLDVQARFIEATFTIN 102
           G++ Y+GVA                           +V +                    
Sbjct: 61  GRQGYSGVATFCHNDFTPLAAEEGLSGILSSSAGNEVVGNYGNQTDFTDEELRSLDNEGR 120

Query: 103 --------------TQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPL 148
                          + + I N+Y P   P    + + K+ +           L     +
Sbjct: 121 ALLSLHKIKSSAGKNEDVVIINVYCPRCEPDDQERLNFKLRFYSLLQTRCEALLSAGRHV 180

Query: 149 IFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS-------------------------- 182
           I  GD N+  +  D  +  +        ++                              
Sbjct: 181 IVVGDMNVSHKAIDHCDAAVNPTKPRQWMDQFLCKLSDMGEIIDKTSEVNHLIGAVGISP 240

Query: 183 ----FQKLQNMGFTDAIRATHDTHHL-YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
                       F D  R  H      ++ W     +   N G RID+I+ S      L 
Sbjct: 241 EKVSNYSQSTGSFVDTFRHFHPQQQEAFTCWRTTTGARQLNYGTRIDYILASMSLQVELL 300

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
            + I     G    SDH PV V+L       K+  + S    P
Sbjct: 301 DSIIMPNVEG----SDHCPVKVTLRCTCETSKKIPTLSTKHMP 339


>gi|260798967|ref|XP_002594471.1| hypothetical protein BRAFLDRAFT_124956 [Branchiostoma floridae]
 gi|229279705|gb|EEN50482.1| hypothetical protein BRAFLDRAFT_124956 [Branchiostoma floridae]
          Length = 561

 Score =  137 bits (344), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 61/329 (18%), Positives = 98/329 (29%), Gaps = 56/329 (17%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + TWN+N +RA    L   +   + DI+CLQETK         +     Y       +
Sbjct: 1   MRILTWNINGVRATKEPLKQVLDSLDADIVCLQETKVTRDQLDEASAIVEGYSSYFSFSR 60

Query: 64  SYNGVAILSKYQ--------------------PIEIVTHLPGDDLDVQ------------ 91
             +G + ++ Y                       E +    GD                 
Sbjct: 61  VRSGYSGVATYCKDGATPIKAEEGLTGLLTNQKEEDIIGCYGDQTMFTEDELRLLDKEGR 120

Query: 92  ---ARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPL 148
               +           +L + N+Y P  +P    + D K+ + +     A   L+    +
Sbjct: 121 AVITQHTIRDTDGKECSLAVINVYCPRADPEKEERKDFKLRFYRLLQTRAQALLQAGSHV 180

Query: 149 IFAGDYNIIPQPHDCYNP----IIWENDACFTLEVRQSFQKL------------QNMGFT 192
           I  GD N   +P D  +P       EN     L+                        F 
Sbjct: 181 IVLGDVNTSHKPIDHCDPDDIEYFSENPGRKWLDQFLLDPHQTGDSGSSESEKGPGGYFV 240

Query: 193 DAIRATHDTHH-LYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP 251
           D  R  H T    ++ W     +   N G RID+I  +    +      I  +  G    
Sbjct: 241 DTFRFFHPTQRSAFTCWSTVTGARQTNYGTRIDYIFANRALLNQFQDCTIMPEVEG---- 296

Query: 252 SDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
           SDH PV   L        +  +      P
Sbjct: 297 SDHCPVRGELACIVVASGKCPALCSKYMP 325


>gi|28867319|ref|NP_789938.1| exodeoxyribonuclease III [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|213970692|ref|ZP_03398817.1| exodeoxyribonuclease III [Pseudomonas syringae pv. tomato T1]
 gi|301382579|ref|ZP_07230997.1| exodeoxyribonuclease III Xth [Pseudomonas syringae pv. tomato
           Max13]
 gi|302063054|ref|ZP_07254595.1| exodeoxyribonuclease III Xth [Pseudomonas syringae pv. tomato K40]
 gi|302133598|ref|ZP_07259588.1| exodeoxyribonuclease III Xth [Pseudomonas syringae pv. tomato NCPPB
           1108]
 gi|28850553|gb|AAO53633.1| exodeoxyribonuclease III, putative [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|213924526|gb|EEB58096.1| exodeoxyribonuclease III [Pseudomonas syringae pv. tomato T1]
 gi|330876504|gb|EGH10653.1| exodeoxyribonuclease III [Pseudomonas syringae pv. morsprunorum
           str. M302280PT]
 gi|331018560|gb|EGH98616.1| exodeoxyribonuclease III, putative [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 259

 Score =  137 bits (344), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 63/264 (23%), Positives = 107/264 (40%), Gaps = 13/264 (4%)

Query: 4   VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + + NVN I+ A    L +W++  N D+ICLQ+T+           Q   Y +  C  
Sbjct: 1   MRIISVNVNGIQGAVERGLLSWLQAQNADVICLQDTRASAFELDDPAFQLDGYFLYACEA 60

Query: 62  -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
              +  GVA+ S+ QP  +++ L  +  D   R+++A F   +         L       
Sbjct: 61  EVPAQGGVALYSRLQPKAVISGLGFETADRYGRYLQADFDKVSI-----ATLLFPSGMNG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF-TLEV 179
               + K   +  F ++  ++       I+ G   +  Q  D  N    +    F   E 
Sbjct: 116 DEDLNQKFKLMDDFGKYMDKQRRKRREYIYCGSLYVAQQKLDIKNWRDSQQSPGFLAPER 175

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
               + +  MG+ DA+R        YS+W     +   N G R D+ +L+P     + SA
Sbjct: 176 AWMDEIVGTMGYVDALREVSREGDQYSWWPDNEQAEMLNLGWRFDYQILTPGLRRFVRSA 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
           R+  +PR     S H P+IV  D 
Sbjct: 236 RLPRQPR----FSQHAPLIVDYDW 255


>gi|306835369|ref|ZP_07468390.1| possible exodeoxyribonuclease III [Corynebacterium accolens ATCC
           49726]
 gi|304568735|gb|EFM44279.1| possible exodeoxyribonuclease III [Corynebacterium accolens ATCC
           49726]
          Length = 297

 Score =  137 bits (344), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 59/306 (19%), Positives = 103/306 (33%), Gaps = 55/306 (17%)

Query: 1   MSVVTVATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           MS +T+A+ NVN IRA           + AW+++   DI+ +QE +            +L
Sbjct: 1   MS-LTIASVNVNGIRAACKQRNENNPGMNAWLEQTPADIVLMQEVRATPDQATKALAPAL 59

Query: 54  --NYHIE--TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
              +H+E      K   GV ILS+    ++           +              +R+ 
Sbjct: 60  EAGWHLELADAAAKGRAGVGILSRTPLADVEIGFGSFTDAGRWIAATTRD------IRVA 113

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
           +LYLP G+  +    +      +     A      ++ ++  GD+NI  +  D  N    
Sbjct: 114 SLYLPSGDTDSPKLDEKYRFLDEFDSVLAENA---DKDMVIGGDWNICHRAQDLKNNKAN 170

Query: 170 ENDACFTLEVR----------------------------------QSFQKLQNMGFTDAI 195
           E  A    E R                                            F  A 
Sbjct: 171 EKKAGHLPEERAFLDHVFGSFPDEAPQEKKNLGEWLGVVDYAGTTPWEPATAPQWFDVAR 230

Query: 196 RATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHT 255
           R   +    Y++W Y   +++ + G RID+   +           +D  P    + SDH+
Sbjct: 231 RLQPEADGPYTWWTYRGQAFNNDAGWRIDYQAATQPLLDRAQRTWVDKAPTVEQRWSDHS 290

Query: 256 PVIVSL 261
           P++V  
Sbjct: 291 PLLVEY 296


>gi|319442911|ref|ZP_07992067.1| putative exodeoxyribonuclease [Corynebacterium variabile DSM 44702]
          Length = 327

 Score =  137 bits (344), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 64/326 (19%), Positives = 110/326 (33%), Gaps = 66/326 (20%)

Query: 1   MSVVTVATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           MS +TVAT NVN IRA           +  W+     DI+ LQE +   +        +L
Sbjct: 4   MS-LTVATVNVNGIRAAAKQRNELNHGILPWLDATPADIVLLQEVRATPEQTEATLAPAL 62

Query: 54  --NYHI--ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
              +H+       K   GVA+LS+ +  ++           +           T  + + 
Sbjct: 63  ASGWHLAQAEAAAKGRAGVAVLSRARIDDVQVGFDELPGAEEFGDAGRWIEAKTAGITVA 122

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
           ++YLP G    + K D+K  ++     + + R    E ++  GD+NI  +  D  N    
Sbjct: 123 SVYLPSG-AENTAKQDEKYRFLDVLGPYLANRAASGEEMVVGGDWNICHRRADLKNWRPN 181

Query: 170 ENDACFTLEVRQSFQK-------------------------------------------- 185
              + F  + R                                                 
Sbjct: 182 RKKSGFLPDERAFMDSLLGTFPDASTQVGDATDAGRNGNPAGGVGDFFGAVDYTPGRVAQ 241

Query: 186 -------LQNMGFTDAIRATHDTHH--LYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
                    +  + D +R  H       YS+W +   ++    G RID+ + S       
Sbjct: 242 ARVAGGAPGDPQWFDVLRQLHADEEEGPYSWWTWRGKAFDTGAGWRIDYQIASRPLFERA 301

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLD 262
            +A +D  P    + SDH+PV+V  +
Sbjct: 302 VAAWVDKAPDYDLRWSDHSPVLVEYN 327


>gi|170719367|ref|YP_001747055.1| exodeoxyribonuclease III Xth [Pseudomonas putida W619]
 gi|169757370|gb|ACA70686.1| exodeoxyribonuclease III Xth [Pseudomonas putida W619]
          Length = 259

 Score =  137 bits (344), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 62/264 (23%), Positives = 107/264 (40%), Gaps = 13/264 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + + NVN I+A     L +W++  N D+ICLQ+T+           Q   Y +  C  
Sbjct: 1   MRIISVNVNGIQAAAERGLLSWLQAQNADVICLQDTRASAFELDDPAFQLDGYFLYACDA 60

Query: 62  -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
              +  GVA+ S+ QP  ++T L  +  D   R+++A F   +    +            
Sbjct: 61  EVPAQGGVALYSRMQPKAVITGLGFETADRYGRYLQADFDKVSIASLL-----LPSGMNG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF-TLEV 179
               + K   +  F ++  ++       I+ G + +  Q  D  N    +    F   E 
Sbjct: 116 DDDLNQKFKLMDDFAKYLDKQRRKRREYIYCGSFYVAQQKLDIKNWRDSQQSPGFLPPER 175

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
                   +MG+ DA+R        YS+W     +   N G R D+ +L+P     + +A
Sbjct: 176 AWMDAITGDMGYVDALREVSREGDQYSWWPDNEQAEMLNLGYRFDYQILTPGLRRFVRNA 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
           R+  +PR     S H P+IV  D 
Sbjct: 236 RLPRQPR----FSQHAPLIVDYDW 255


>gi|55741922|ref|NP_001006804.1| APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Xenopus
           (Silurana) tropicalis]
 gi|49903339|gb|AAH76676.1| APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Xenopus
           (Silurana) tropicalis]
          Length = 517

 Score =  137 bits (344), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 67/330 (20%), Positives = 108/330 (32%), Gaps = 57/330 (17%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNF--PFETLQSLN-YHIETC 60
           + + +WN+N IRA    L   +   + DIICLQETK        P   ++  N Y   + 
Sbjct: 1   MKIVSWNINGIRATRVGLKETLDSLDADIICLQETKVTRDLLDEPSAIVEGYNSYFSFSR 60

Query: 61  GQKSYNGVAILSKYQ------------PIEIVTHLPGDDLDVQ----------------- 91
           G+  Y+GVA   K               +   T   G   + +                 
Sbjct: 61  GRSGYSGVATFCKSSTTPWAAEEGLSGMLCNHTGSIGCYGNTEEFLEEELQSLDQEGRAV 120

Query: 92  -ARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIF 150
             +          +TL + N+Y P  +P    +   K+ + +     A   L+    +I 
Sbjct: 121 LTQHRIRNCEGKEETLTVINVYCPRADPEKPERKTYKLRFYRLLQTRAEAILQKGGHVII 180

Query: 151 AGDYNIIPQPHDCYNP-----------IIWENDACFTLEVRQS-------FQKLQNMGFT 192
            GD N   +P D  +P             W N         Q             +  F 
Sbjct: 181 LGDVNTSHRPLDHCDPTDLETFEENPGRQWLNQFLGDPVPSQKGDSETGTPPSGGSGRFY 240

Query: 193 DAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL-LHSARIDTKPRGWTK 250
           D+ R  H T  + ++ W   + +   N G RID+I+ + E        + I  +  G   
Sbjct: 241 DSFRYFHPTQRNAFTCWCSASGARQTNYGTRIDYILGNSELVEREFLDSIIMPEVEG--- 297

Query: 251 PSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
            SDH PV   +        +         P
Sbjct: 298 -SDHCPVKAVMKCRPIAANKCPPLCTKYLP 326


>gi|109499818|ref|XP_223499.3| PREDICTED: APEX nuclease (apurinic/apyrimidinic endonuclease) 2
           [Rattus norvegicus]
 gi|109500734|ref|XP_001059968.1| PREDICTED: APEX nuclease (apurinic/apyrimidinic endonuclease) 2
           [Rattus norvegicus]
          Length = 516

 Score =  137 bits (344), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 60/335 (17%), Positives = 104/335 (31%), Gaps = 63/335 (18%)

Query: 3   VVTVATWNVNSIRARIHNL------------AAWIKENNPDIICLQETKTEDKNFPFETL 50
           ++ V +WN+N IR  +  L               ++E + DI+CLQETK           
Sbjct: 1   MLRVVSWNINGIRRPLQGLGCEVTSNCPTALRHILRELDADIVCLQETKVSRDALTEPLA 60

Query: 51  QSLNYHIETCGQKSYNGVAILSKYQPIEI------------------VTHLPGDDLDVQA 92
               Y+      +S +G + ++ +    +                       G+  +   
Sbjct: 61  VVEGYNSYFSFSRSRSGYSGVATFCKDSVTPVAAEEGLSGQFATLSGHVGCYGNMNEFTQ 120

Query: 93  ---------------RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF 137
                          +    T     + L + N+Y PH +P    +   K+ + +     
Sbjct: 121 EQLRALDSEGRALLTQHKICTQEGKEKPLTLINVYCPHASPGNHERLTFKMRFYRLLQIR 180

Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCYNP-----------IIWENDACFTLEVRQSFQKL 186
           A   L     +I  GD N    P D  N              W +     LE        
Sbjct: 181 AEALLAAGSHVIILGDINTAHHPIDHCNAGNLECFEEDLGRRWMDGLLSNLEYPAGSHIG 240

Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA-TSLLHSARIDTKP 245
             M               ++ W   + + S N G R+D+I+ + +     L  A +  + 
Sbjct: 241 PFMDSYRYF--YPKQERAFTCWSMISGARSLNYGTRLDYILGNRDLIIDTLQDAFLLPEV 298

Query: 246 RGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
            G    SDH PV   L++     KQ  +      P
Sbjct: 299 MG----SDHCPVGAVLNVSCVPAKQCPALCTRFLP 329


>gi|149047282|gb|EDL99951.1| rCG36041 [Rattus norvegicus]
          Length = 485

 Score =  137 bits (344), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 60/335 (17%), Positives = 104/335 (31%), Gaps = 63/335 (18%)

Query: 3   VVTVATWNVNSIRARIHNL------------AAWIKENNPDIICLQETKTEDKNFPFETL 50
           ++ V +WN+N IR  +  L               ++E + DI+CLQETK           
Sbjct: 1   MLRVVSWNINGIRRPLQGLGCEVTSNCPTALRHILRELDADIVCLQETKVSRDALTEPLA 60

Query: 51  QSLNYHIETCGQKSYNGVAILSKYQPIEI------------------VTHLPGDDLDVQA 92
               Y+      +S +G + ++ +    +                       G+  +   
Sbjct: 61  VVEGYNSYFSFSRSRSGYSGVATFCKDSVTPVAAEEGLSGQFATLSGHVGCYGNMNEFTQ 120

Query: 93  ---------------RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF 137
                          +    T     + L + N+Y PH +P    +   K+ + +     
Sbjct: 121 EQLRALDSEGRALLTQHKICTQEGKEKPLTLINVYCPHASPGNHERLTFKMRFYRLLQIR 180

Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCYNP-----------IIWENDACFTLEVRQSFQKL 186
           A   L     +I  GD N    P D  N              W +     LE        
Sbjct: 181 AEALLAAGSHVIILGDINTAHHPIDHCNAGNLECFEEDLGRRWMDGLLSNLEYPAGSHIG 240

Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA-TSLLHSARIDTKP 245
             M               ++ W   + + S N G R+D+I+ + +     L  A +  + 
Sbjct: 241 PFMDSYRYF--YPKQERAFTCWSMISGARSLNYGTRLDYILGNRDLIIDTLQDAFLLPEV 298

Query: 246 RGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
            G    SDH PV   L++     KQ  +      P
Sbjct: 299 MG----SDHCPVGAVLNVSCVPAKQCPALCTRFLP 329


>gi|227499267|ref|ZP_03929379.1| exodeoxyribonuclease III [Anaerococcus tetradius ATCC 35098]
 gi|227218676|gb|EEI83907.1| exodeoxyribonuclease III [Anaerococcus tetradius ATCC 35098]
          Length = 273

 Score =  137 bits (344), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 63/281 (22%), Positives = 102/281 (36%), Gaps = 31/281 (11%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTED-------KNFP 46
           +   +WN++S+ A +           ++   IK  + DII LQETK          K   
Sbjct: 1   MKFISWNIDSLNAALTSDSARAKLSRDVLDTIKNEDADIIALQETKLPATGPSKKHKEKL 60

Query: 47  FETLQSLNYHIETCG---QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
           FE     +Y   +     +KSY G   L K       +       D              
Sbjct: 61  FEFFPDYDYFWVSSRDSARKSYAGTMTLYKKGLKVKESFPEIGAPDTMDLEGRILTLELD 120

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
               +       G  +      +             + L+  +P+I  GD+N+  +  D 
Sbjct: 121 DYYFVQVYTPNAGGELNRLPLREIWDLKFADY---LEELDKIKPVIATGDFNVAHEEIDL 177

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYAD-SWSKNKGI 221
            +P      A FT E R+ F  L N GFTD+ R  +      Y++W      S   N G 
Sbjct: 178 AHPENNHMSAGFTDEERRGFTNLLNRGFTDSFRYLNKDLEGAYTWWAQRVKTSKINNSGW 237

Query: 222 RIDHIMLSPEATSLLHSA-RIDTKPRGWTKPSDHTPVIVSL 261
           RID+ ++S      +  +  ID+  R      DHTP+++ +
Sbjct: 238 RIDYFLVSDRLIDKVKDSTMIDSGQRQ-----DHTPIMLEI 273


>gi|104784334|ref|YP_610832.1| catabolite repression control protein Crc [Pseudomonas entomophila
           L48]
 gi|95113321|emb|CAK18049.1| putative catabolite repression control protein Crc [Pseudomonas
           entomophila L48]
          Length = 259

 Score =  137 bits (344), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 63/264 (23%), Positives = 107/264 (40%), Gaps = 13/264 (4%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + + NVN I+A     L +W++  N D+ICLQ+T+           Q   Y +  C  
Sbjct: 1   MRIISVNVNGIQAAAERGLLSWLQAQNADVICLQDTRASAFELDDPAFQLDGYFLYACDA 60

Query: 62  -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
              +  GVA+ S+ QP  ++T L  +  D   R+++A F   +         L       
Sbjct: 61  EVPTQGGVALYSRMQPKAVITGLGFETADRYGRYLQADFDKVS-----IATLLLPSGMNG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF-TLEV 179
               + K   +  F ++  ++       I+ G + +  Q  D  N    +    F   E 
Sbjct: 116 DDDLNQKFKLMDDFAKYLDKQRRKRREYIYCGSFYVAQQKLDIKNWRDSQQSVGFLPPER 175

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
                   +MG+ DA+R        YS+W     +   N G R D+ +L+P     + +A
Sbjct: 176 AWMDAITGDMGYVDALREVSREGDQYSWWPDNEQAEMLNLGYRFDYQILTPGLRRFVRNA 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
           R+  +PR     S H P+IV  D 
Sbjct: 236 RLPRQPR----FSRHAPLIVDYDW 255


>gi|297735011|emb|CBI17373.3| unnamed protein product [Vitis vinifera]
          Length = 400

 Score =  136 bits (343), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 57/352 (16%), Positives = 97/352 (27%), Gaps = 75/352 (21%)

Query: 4   VTVATWNVNSIRARIHNL---AAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           + + T+NVN +R RI        ++   + DIIC+QETK        + + +  Y     
Sbjct: 1   MKIVTYNVNGLRPRISQFGSLLKFLSSLDADIICVQETKLSRHELTADVVMADGYESFFS 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT---------------------- 98
             ++ +   +                  +V                              
Sbjct: 61  CTRTNSKGRVGYSGVATFCRVKSAFSSTEVALPIAAEEGFTGLLEKSGGFGTGKDEIPVK 120

Query: 99  ---------------------FTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF 137
                                   +     + N+Y P  +   + +   K ++ +   + 
Sbjct: 121 AEGLEEFAKDELLKVDSEGRCIITDHGHFVLFNIYGPRADSEDTERIQFKHTFFQILQKR 180

Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA 197
                +    +   GD NI P   D  +         F    R    +     F      
Sbjct: 181 WETLQQQGRRIFVVGDLNIAPAAIDRCDAGPDFEKNEFRRWFRSMLVECGGPFFDVFRAK 240

Query: 198 THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE-------ATSL------LHSARIDTK 244
             D    Y+ W     +   N G RIDHI+ S                   +    I T+
Sbjct: 241 HPDRREAYTCWSSSTGAEEFNYGSRIDHILSSGSCLHQDHCLQDRIFVTCHVKECDILTQ 300

Query: 245 PRGWT---------------KPSDHTPVIVSL-DIPEPRKKQQDSTSQNMKP 280
            + W                + SDH PV +SL DIP+  +    S S    P
Sbjct: 301 FKRWKPGNKPRWKGGRSIKLEGSDHAPVFMSLMDIPDVAQHSTPSLSARYVP 352


>gi|225431130|ref|XP_002265926.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 625

 Score =  136 bits (343), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 57/352 (16%), Positives = 97/352 (27%), Gaps = 75/352 (21%)

Query: 4   VTVATWNVNSIRARIHNL---AAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           + + T+NVN +R RI        ++   + DIIC+QETK        + + +  Y     
Sbjct: 1   MKIVTYNVNGLRPRISQFGSLLKFLSSLDADIICVQETKLSRHELTADVVMADGYESFFS 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT---------------------- 98
             ++ +   +                  +V                              
Sbjct: 61  CTRTNSKGRVGYSGVATFCRVKSAFSSTEVALPIAAEEGFTGLLEKSGGFGTGKDEIPVK 120

Query: 99  ---------------------FTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF 137
                                   +     + N+Y P  +   + +   K ++ +   + 
Sbjct: 121 AEGLEEFAKDELLKVDSEGRCIITDHGHFVLFNIYGPRADSEDTERIQFKHTFFQILQKR 180

Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA 197
                +    +   GD NI P   D  +         F    R    +     F      
Sbjct: 181 WETLQQQGRRIFVVGDLNIAPAAIDRCDAGPDFEKNEFRRWFRSMLVECGGPFFDVFRAK 240

Query: 198 THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE-------ATSL------LHSARIDTK 244
             D    Y+ W     +   N G RIDHI+ S                   +    I T+
Sbjct: 241 HPDRREAYTCWSSSTGAEEFNYGSRIDHILSSGSCLHQDHCLQDRIFVTCHVKECDILTQ 300

Query: 245 PRGWT---------------KPSDHTPVIVSL-DIPEPRKKQQDSTSQNMKP 280
            + W                + SDH PV +SL DIP+  +    S S    P
Sbjct: 301 FKRWKPGNKPRWKGGRSIKLEGSDHAPVFMSLMDIPDVAQHSTPSLSARYVP 352


>gi|296120099|ref|ZP_06838653.1| putative exodeoxyribonuclease [Corynebacterium ammoniagenes DSM
           20306]
 gi|295967253|gb|EFG80524.1| putative exodeoxyribonuclease [Corynebacterium ammoniagenes DSM
           20306]
          Length = 302

 Score =  136 bits (343), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 65/310 (20%), Positives = 114/310 (36%), Gaps = 56/310 (18%)

Query: 1   MSVVTVATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           MS +T+A+ NVN IRA           + AW++E + DI+ +QE +            SL
Sbjct: 1   MS-LTIASVNVNGIRAACKQRNELNPGMNAWLEETSADIVLMQEVRANPAQTELALKPSL 59

Query: 54  --NYHIE-----TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
              +H+      T G K   GV ILS+    ++           +              +
Sbjct: 60  EAGWHLAMADALTPGAKGRAGVGILSRTPLTDVEIGFGSFLESGRW------IEATAAGV 113

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
           R+ +LYLP G+ + S K D+K +++  F     +R      ++  GD+NI  +  D  N 
Sbjct: 114 RVASLYLPSGD-VNSPKLDEKYNFLDEFAGVLEKRAAEHTDMVIGGDWNICHRAQDLKNN 172

Query: 167 IIWENDACFTLEVRQSFQKLQNM----------------------------------GFT 192
              E  +    E R     +                                      F 
Sbjct: 173 KPNEKKSGHLPEERAFMDHVFGAFPDAHAQEKKGLGDWLGIVDYETKTNWQPTEDPKWFD 232

Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPS 252
            A R   +    Y++W Y   +++ + G RID+   +         + ++  P    + S
Sbjct: 233 VARRLEPEAEGPYTWWTYRGQAFNNDAGWRIDYQAATDSMLQRAQRSWVEKAPSVEERWS 292

Query: 253 DHTPVIVSLD 262
           DH+P++V  +
Sbjct: 293 DHSPLMVEYN 302


>gi|165932926|ref|YP_001649715.1| exodeoxyribonuclease III [Rickettsia rickettsii str. Iowa]
 gi|165908013|gb|ABY72309.1| exodeoxyribonuclease III [Rickettsia rickettsii str. Iowa]
          Length = 261

 Score =  136 bits (343), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 73/258 (28%), Positives = 113/258 (43%), Gaps = 7/258 (2%)

Query: 15  RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKSYNGVAILSK 73
           R RI  L     E+ PDII LQETK  D  FP E ++++ Y H+   GQKSYNGVAI+SK
Sbjct: 2   RLRIDLLRKLAYEHQPDIILLQETKVADSLFPLEVIKNIGYEHVIYSGQKSYNGVAIISK 61

Query: 74  YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKR 133
           +    + +    +        +     I+   +          +   +TK+  K+ +I+ 
Sbjct: 62  FPLNNVFSLELYNSDKRHIAAMVNDIEIHNFYV---PAGGDIPDIEVNTKFKHKLEYIRL 118

Query: 134 FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN--MGF 191
              + +      + +I  GD NI P  HD ++     N    T   R    +LQN     
Sbjct: 119 MQEWLTTNRTKNDKMIIVGDLNIAPHEHDVWSSKQLRNVISHTDIERSLLVELQNALGFI 178

Query: 192 TDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
             +          Y++W Y    W K N+G R+DHI +S      L S  + ++ R W  
Sbjct: 179 DSSRHFVSLDEKFYTWWSYRNIDWKKSNRGRRLDHIWVSDNLKGALFSMHLLSEARDWFS 238

Query: 251 PSDHTPVIVSLDIPEPRK 268
           PSDH P  V+ ++    +
Sbjct: 239 PSDHVPYFVTFNLQMSSR 256


>gi|260663817|ref|ZP_05864702.1| exodeoxyribonuclease III [Lactobacillus fermentum 28-3-CHN]
 gi|260551578|gb|EEX24765.1| exodeoxyribonuclease III [Lactobacillus fermentum 28-3-CHN]
          Length = 279

 Score =  136 bits (342), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 61/284 (21%), Positives = 106/284 (37%), Gaps = 29/284 (10%)

Query: 4   VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTED-------KNFP 46
           +   +WN++SI A +            +   IK   PD+I +QETK          +   
Sbjct: 1   MRFISWNIDSINAALTGTSARAEETRAVLEKIKAAAPDVIAIQETKLSKSGPTKKHQGVL 60

Query: 47  FETLQSLN--YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
            E        +       +      +    + +      P               T+  +
Sbjct: 61  AELFAGYTVVWRSSVEPARKGYAGTMYLYKESLTPKVTYPTIGAPEPMDEEGRIITLEFK 120

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
              +  +Y P+         + +        R     L+ ++P+I +GD+N+  +  D  
Sbjct: 121 NFYLTEVYTPNSGTGLKRLAERQEWD--DRYREYLTELDRQKPVIASGDFNVAHEEIDLA 178

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYA-DSWSKNKGIR 222
           +P    + A FT E R+ F  L   GFTD+ R+ H      YS+W   A  S   N G R
Sbjct: 179 HPANNHHSAGFTDEEREKFTALLAAGFTDSFRSLHPDETGAYSWWAQRAVTSKVNNSGWR 238

Query: 223 IDHIMLSPEATSLLHSA-RIDTKPRGWTKPSDHTPVIVSLDIPE 265
           ID+ ++S      + S+  ID+  R      DH P+ + ++IP 
Sbjct: 239 IDYWLVSDRLADQVVSSTMIDSGERR-----DHAPIQLDINIPA 277


>gi|213964825|ref|ZP_03393024.1| exonuclease III [Corynebacterium amycolatum SK46]
 gi|213952361|gb|EEB63744.1| exonuclease III [Corynebacterium amycolatum SK46]
          Length = 318

 Score =  136 bits (342), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 59/318 (18%), Positives = 98/318 (30%), Gaps = 58/318 (18%)

Query: 1   MSVVTVATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKNFPFETLQ-- 51
           MS +T+AT NVN IRA +         L  W+K  + D++ LQE +  D           
Sbjct: 1   MS-LTIATINVNGIRAAVKERSETNLGLLEWLKHTSSDVVLLQEVRATDDQACKALAPAF 59

Query: 52  SLNYHIETCGQ---KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFI------EATFTIN 102
              +H         K   GV ILS++   ++   +  ++ +   RFI        T    
Sbjct: 60  DAGWHWVGAENLGAKGRAGVGILSRFPLNDVQVGIGSEEFEESGRFISGVAPAADTGLDA 119

Query: 103 TQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD 162
              +    L           +    +     +L     +       +  GD+NI  +  D
Sbjct: 120 DVQIASLYLPSGAALSEKQDEKYRFLDAFSDYLADLGAKGRDGHHAVIGGDWNICHREQD 179

Query: 163 CYNPIIWENDACFTLEVRQSFQKLQNMG-------------------------------- 190
             N       + F  + R     +                                    
Sbjct: 180 LKNWKTNRRKSGFLPQERAWMDSVFGCWPDEVPQDSQVQASDKELESGTFSDGSVWEAPA 239

Query: 191 ------FTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
                 + D  R  H      +S+W Y   ++  + G RID+   +        SA +D 
Sbjct: 240 LNADPVWFDVTRRLHPEADGPWSWWTYRGKAFDTDAGWRIDYQAATEPMLKRAVSAVVDK 299

Query: 244 KPRGWTKPSDHTPVIVSL 261
                 + +DH PVIV  
Sbjct: 300 PATYDLRWTDHAPVIVEY 317


>gi|184154634|ref|YP_001842974.1| exodeoxyribonuclease [Lactobacillus fermentum IFO 3956]
 gi|227513882|ref|ZP_03943931.1| exodeoxyribonuclease III [Lactobacillus fermentum ATCC 14931]
 gi|183225978|dbj|BAG26494.1| exodeoxyribonuclease [Lactobacillus fermentum IFO 3956]
 gi|227087743|gb|EEI23055.1| exodeoxyribonuclease III [Lactobacillus fermentum ATCC 14931]
          Length = 279

 Score =  136 bits (342), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 61/284 (21%), Positives = 106/284 (37%), Gaps = 29/284 (10%)

Query: 4   VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTED-------KNFP 46
           +   +WN++SI A +            +   IK   PD+I +QETK          +   
Sbjct: 1   MRFISWNIDSINAALTGTSARAEETRAVLEKIKAAAPDVIAIQETKLSKSGPTKKHQGVL 60

Query: 47  FETLQSLN--YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
            E        +       +      +    + +      P               T+  +
Sbjct: 61  AELFAGYTVVWRSSVEPARKGYAGTMYLYKESLTPKVTYPTIGAPEPMDEEGRIITLEFE 120

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
              +  +Y P+         + +        R     L+ ++P+I +GD+N+  +  D  
Sbjct: 121 NFYLTEVYTPNSGTGLKRLAERQEWD--DRYREYLTELDRQKPVIASGDFNVAHEEIDLA 178

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYA-DSWSKNKGIR 222
           +P    + A FT E R+ F  L   GFTD+ R+ H      YS+W   A  S   N G R
Sbjct: 179 HPANNHHSAGFTDEEREKFTALLAAGFTDSFRSLHPDETGAYSWWAQRAVTSKVNNSGWR 238

Query: 223 IDHIMLSPEATSLLHSA-RIDTKPRGWTKPSDHTPVIVSLDIPE 265
           ID+ ++S      + S+  ID+  R      DH P+ + ++IP 
Sbjct: 239 IDYWLVSDRLADQVVSSTMIDSGERR-----DHAPIQLDINIPA 277


>gi|299782782|gb|ADJ40780.1| Exodeoxyribonuclease [Lactobacillus fermentum CECT 5716]
          Length = 279

 Score =  136 bits (342), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 61/284 (21%), Positives = 106/284 (37%), Gaps = 29/284 (10%)

Query: 4   VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTED-------KNFP 46
           +   +WN++SI A +            +   IK   PD+I +QETK          +   
Sbjct: 1   MRFISWNIDSINAALTGTSARAEETRAVLEKIKAAAPDVIAIQETKLSKSGPTKKHQGVL 60

Query: 47  FETLQSLN--YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
            E        +       +      +    + +      P               T+  +
Sbjct: 61  AELFAGYTVVWRSSVEPARKGYAGTMYLYKESLTPKVTYPTIGAPEPMDKEGRIITLEFE 120

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
              +  +Y P+         + +        R     L+ ++P+I +GD+N+  +  D  
Sbjct: 121 NFYLTEVYTPNSGTGLKRLAERQEWD--DRYREYLTELDRQKPVIASGDFNVAHEEIDLA 178

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYA-DSWSKNKGIR 222
           +P    + A FT E R+ F  L   GFTD+ R+ H      YS+W   A  S   N G R
Sbjct: 179 HPANNHHSAGFTDEEREKFTALLAAGFTDSFRSLHPDETGAYSWWAQRAVTSKVNNSGWR 238

Query: 223 IDHIMLSPEATSLLHSA-RIDTKPRGWTKPSDHTPVIVSLDIPE 265
           ID+ ++S      + S+  ID+  R      DH P+ + ++IP 
Sbjct: 239 IDYWLVSDRLADQVVSSTMIDSGERR-----DHAPIQLDINIPA 277


>gi|227502780|ref|ZP_03932829.1| possible exodeoxyribonuclease III [Corynebacterium accolens ATCC
           49725]
 gi|227076510|gb|EEI14473.1| possible exodeoxyribonuclease III [Corynebacterium accolens ATCC
           49725]
          Length = 297

 Score =  136 bits (342), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 59/306 (19%), Positives = 103/306 (33%), Gaps = 55/306 (17%)

Query: 1   MSVVTVATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           MS +T+A+ NVN IRA           + AW+++   DI+ +QE +            +L
Sbjct: 1   MS-LTIASVNVNGIRAACKQRNENNPGMNAWLEQTPADIVLMQEVRATPDQARKALAPAL 59

Query: 54  --NYHIE--TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
              +H+E      K   GV ILS+    ++           +              +R+ 
Sbjct: 60  EAGWHLELADAAAKGRAGVGILSRTPLADVEIGFGSFTDAGRWIAATTRD------IRVA 113

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
           +LYLP G+  +    +      +     A      ++ ++  GD+NI  +  D  N    
Sbjct: 114 SLYLPSGDTDSPKLDEKYRFLDEFDAVLAENA---DKDMVIGGDWNICHRAQDLKNNKAN 170

Query: 170 ENDACFTLEVR----------------------------------QSFQKLQNMGFTDAI 195
           E  A    E R                                            F  A 
Sbjct: 171 EKKAGHLPEERAFLDHVFGSFPDEEPQEKKNLGEWLGVVDYAGTTPWEPATAPQWFDVAR 230

Query: 196 RATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHT 255
           R   +    Y++W Y   +++ + G RID+   +           +D  P    + SDH+
Sbjct: 231 RLHPEADGPYTWWTYRGQAFNNDAGWRIDYQAATQPLLDRAQRTWVDKAPTVEQRWSDHS 290

Query: 256 PVIVSL 261
           P++V  
Sbjct: 291 PLLVEY 296


>gi|325685174|gb|EGD27297.1| exodeoxyribonuclease III [Lactobacillus delbrueckii subsp. lactis
           DSM 20072]
          Length = 275

 Score =  136 bits (342), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 57/282 (20%), Positives = 108/282 (38%), Gaps = 29/282 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTED------KNFPF 47
           + + +WN++S+ A +            +   + + +PD++ LQETK              
Sbjct: 1   MRLISWNIDSLNAALTGTSPRAEMTRGVLKNLHDLDPDVLALQETKLPASGPSKKHQAAL 60

Query: 48  ETLQSLNYHIETCGQKS---YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
             L    Y +     +         +    + ++ V   P         F     T+   
Sbjct: 61  ADLFPEYYFVWRSSMEPARKGYAGTMFLYKKGLDPVVTRPEIGAPEPMDFEGRILTLEFP 120

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
              +  +Y P+         D +     +  R   + L+ ++P++ +GD+N   Q  D  
Sbjct: 121 DFYVTQVYTPNAGNGLVRLGDRQ--EWDKCYRAYLEELDKKKPVLASGDFNAAYQEIDLK 178

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYY-ADSWSKNKGIR 222
           +P    + A FT E R  F +L   GFTD  R  H     +YS+W      + + N G R
Sbjct: 179 HPENNHHSAGFTDEERAGFGQLLAAGFTDTFRQIHGQVEGVYSWWAQRVRTAKANNSGWR 238

Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           ID+ ++S      +  +  I+T  R      DH P+++ + +
Sbjct: 239 IDYWLVSNRLADQVEKSEMIETGERA-----DHCPILLEIKL 275


>gi|323465631|gb|ADX69318.1| Exodeoxyribonuclease A [Lactobacillus helveticus H10]
          Length = 284

 Score =  136 bits (341), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 59/282 (20%), Positives = 107/282 (37%), Gaps = 25/282 (8%)

Query: 2   SVVTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTED-------KN 44
            ++ + +WN++S+ A +            +   I   NPDII +QETK          + 
Sbjct: 8   KIMILISWNIDSLNAALTGTSARAEETRGVLDKIHALNPDIIAIQETKLRATGPTKKHQT 67

Query: 45  FPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
              E     +Y   +  + +  G A        E+   +    +       E    I  +
Sbjct: 68  ILAEKFPEYDYVWRSSEEPARKGYAGTMYLYKKELTPAVSKPAIGAPEPMDEEGRIITLE 127

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
             +     +   N     K         +      ++L  ++P++ +GDYN      D  
Sbjct: 128 FDKYFVTQVYTPNSGNGLKRLADRQVWDQKYIEYLKKLNEKKPVLASGDYNCAHTEIDLK 187

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYY-ADSWSKNKGIR 222
           +P    + A FT E R  F  L + GFTD  R  +     +YS+W      + + N G R
Sbjct: 188 HPENNHHSAGFTDEERADFTNLLDAGFTDTFRKVNGNVEGVYSWWAQRVRTAKANNSGWR 247

Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           ID+ ++S      +  +  IDT  R      DH P+++ +++
Sbjct: 248 IDYWLVSNRIADKVVRSEMIDTGKRA-----DHCPILLEINL 284


>gi|311347452|gb|ADP90671.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
          Length = 518

 Score =  136 bits (341), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 59/336 (17%), Positives = 106/336 (31%), Gaps = 64/336 (19%)

Query: 3   VVTVATWNVNSIRARIHNLA-------------AWIKENNPDIICLQETKTEDKNF--PF 47
           ++ V +WN+N IR  +  +A               + E + DI+CLQETK        P 
Sbjct: 1   MLRVVSWNINGIRRPLQGVANQEPSNCAAVAVGRILDELDADIVCLQETKVTRDALTEPL 60

Query: 48  ETLQSLN-YHIETCGQKSYNGVAILSKYQPIEI---------------VTHLPGDDLDVQ 91
             ++  N Y   +  +  Y+GVA   K     +                    G+  +  
Sbjct: 61  AIVEGYNSYFSFSRNRSGYSGVATFCKDNATPVAAEEGLSGLFATQNGDVGCYGNMDEFT 120

Query: 92  A---------------RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
                           +    T+    +TL + N+Y PH +P    +   K+ + +    
Sbjct: 121 QEELRALDSEGRALLTQHKIRTWEGKEKTLTLINVYCPHADPGRPERLVFKMRFYRLLQI 180

Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCY-----------NPIIWENDACFTLEVRQSFQK 185
            A   L     +I  GD N   +P D +               W +     L  + +   
Sbjct: 181 RAEALLAAGSHVIILGDLNTAHRPIDHWDAVNLECFEEDPGRKWMDSLLSNLGCQSASHV 240

Query: 186 LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT-SLLHSARIDTK 244
              +      +        ++ W     +   N G R+D+++           ++ +  +
Sbjct: 241 GPFIDSYRCFQP--KQEGAFTCWSAVTGARHLNYGSRLDYVLGDRTLVIDTFQASFLLPE 298

Query: 245 PRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
             G    SDH PV   L +     KQ         P
Sbjct: 299 VMG----SDHCPVGAVLSVSSVPAKQCPPLCTRFLP 330


>gi|5410346|gb|AAD43041.1|AF119046_1 APE2 protein [Homo sapiens]
          Length = 518

 Score =  136 bits (341), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 59/336 (17%), Positives = 106/336 (31%), Gaps = 64/336 (19%)

Query: 3   VVTVATWNVNSIRARIHNLA-------------AWIKENNPDIICLQETKTEDKNF--PF 47
           ++ V +WN+N IR  +  +A               + E + DI+CLQETK        P 
Sbjct: 1   MLRVVSWNINGIRRPLQGVANQEPSNCAAVAVGRILDELDADIVCLQETKVTRDALTEPL 60

Query: 48  ETLQSLN-YHIETCGQKSYNGVAILSKYQPIEI---------------VTHLPGDDLDVQ 91
             ++  N Y   +  +  Y+GVA   K     +                    G+  +  
Sbjct: 61  AIVEGYNSYFSFSRNRSGYSGVATFCKDNATPVAAEEGLSGLFATQNGDVGCYGNMDEFT 120

Query: 92  A---------------RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
                           +    T+    +TL + N+Y PH +P    +   K+ + +    
Sbjct: 121 QEELRALDSEGRALLTQHKIRTWEGKEKTLTLINVYCPHADPGRPERLVFKMRFYRLLQI 180

Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCY-----------NPIIWENDACFTLEVRQSFQK 185
            A   L     +I  GD N   +P D +               W +     L  + +   
Sbjct: 181 RAEALLAAGSHVIILGDLNTAHRPIDHWDAVNLECFEEDPGRKWMDSLLSNLGCQSASHV 240

Query: 186 LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT-SLLHSARIDTK 244
              +      +        ++ W     +   N G R+D+++           ++ +  +
Sbjct: 241 GPFIDSYRCFQP--KQEGAFTCWSAVTGARHLNYGSRLDYVLGDRTLVIDTFQASFLLPE 298

Query: 245 PRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
             G    SDH PV   L +     KQ         P
Sbjct: 299 VMG----SDHCPVGAVLSVSSVPAKQCPPLCTRFLP 330


>gi|18375507|ref|NP_055296.2| DNA-(apurinic or apyrimidinic site) lyase 2 [Homo sapiens]
 gi|73921676|sp|Q9UBZ4|APEX2_HUMAN RecName: Full=DNA-(apurinic or apyrimidinic site) lyase 2; AltName:
           Full=AP endonuclease XTH2; AltName: Full=APEX nuclease
           2; AltName: Full=APEX nuclease-like 2; AltName:
           Full=Apurinic-apyrimidinic endonuclease 2; Short=AP
           endonuclease 2
 gi|4996359|dbj|BAA78422.1| APEX nuclease-like 2 protein [Homo sapiens]
 gi|5102658|emb|CAB45242.1| AP endonuclease XTH2, putative [Homo sapiens]
 gi|10336529|dbj|BAB13764.1| apurinic/apyrimidinic endonuclease 2 [Homo sapiens]
 gi|12804203|gb|AAH02959.1| APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Homo sapiens]
 gi|57471611|emb|CAI43126.1| APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Homo sapiens]
 gi|57864642|gb|AAW56941.1| APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Homo sapiens]
 gi|119613615|gb|EAW93209.1| APEX nuclease (apurinic/apyrimidinic endonuclease) 2, isoform CRA_b
           [Homo sapiens]
 gi|123993987|gb|ABM84595.1| APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [synthetic
           construct]
 gi|123997761|gb|ABM86482.1| APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [synthetic
           construct]
 gi|208965822|dbj|BAG72925.1| APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [synthetic
           construct]
 gi|311347418|gb|ADP90654.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347420|gb|ADP90655.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347422|gb|ADP90656.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347424|gb|ADP90657.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347426|gb|ADP90658.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347428|gb|ADP90659.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347430|gb|ADP90660.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347432|gb|ADP90661.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347434|gb|ADP90662.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347436|gb|ADP90663.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347438|gb|ADP90664.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347440|gb|ADP90665.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347442|gb|ADP90666.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347444|gb|ADP90667.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347446|gb|ADP90668.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347448|gb|ADP90669.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347450|gb|ADP90670.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347454|gb|ADP90672.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347456|gb|ADP90673.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347458|gb|ADP90674.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347460|gb|ADP90675.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347462|gb|ADP90676.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347464|gb|ADP90677.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347466|gb|ADP90678.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347468|gb|ADP90679.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347470|gb|ADP90680.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347472|gb|ADP90681.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347474|gb|ADP90682.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347476|gb|ADP90683.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347478|gb|ADP90684.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347480|gb|ADP90685.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347482|gb|ADP90686.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347484|gb|ADP90687.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347488|gb|ADP90689.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347490|gb|ADP90690.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347492|gb|ADP90691.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347494|gb|ADP90692.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
 gi|311347496|gb|ADP90693.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
          Length = 518

 Score =  136 bits (341), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 59/336 (17%), Positives = 106/336 (31%), Gaps = 64/336 (19%)

Query: 3   VVTVATWNVNSIRARIHNLA-------------AWIKENNPDIICLQETKTEDKNF--PF 47
           ++ V +WN+N IR  +  +A               + E + DI+CLQETK        P 
Sbjct: 1   MLRVVSWNINGIRRPLQGVANQEPSNCAAVAVGRILDELDADIVCLQETKVTRDALTEPL 60

Query: 48  ETLQSLN-YHIETCGQKSYNGVAILSKYQPIEI---------------VTHLPGDDLDVQ 91
             ++  N Y   +  +  Y+GVA   K     +                    G+  +  
Sbjct: 61  AIVEGYNSYFSFSRNRSGYSGVATFCKDNATPVAAEEGLSGLFATQNGDVGCYGNMDEFT 120

Query: 92  A---------------RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
                           +    T+    +TL + N+Y PH +P    +   K+ + +    
Sbjct: 121 QEELRALDSEGRALLTQHKIRTWEGKEKTLTLINVYCPHADPGRPERLVFKMRFYRLLQI 180

Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCY-----------NPIIWENDACFTLEVRQSFQK 185
            A   L     +I  GD N   +P D +               W +     L  + +   
Sbjct: 181 RAEALLAAGSHVIILGDLNTAHRPIDHWDAVNLECFEEDPGRKWMDSLLSNLGCQSASHV 240

Query: 186 LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT-SLLHSARIDTK 244
              +      +        ++ W     +   N G R+D+++           ++ +  +
Sbjct: 241 GPFIDSYRCFQP--KQEGAFTCWSAVTGARHLNYGSRLDYVLGDRTLVIDTFQASFLLPE 298

Query: 245 PRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
             G    SDH PV   L +     KQ         P
Sbjct: 299 VMG----SDHCPVGAVLSVSSVPAKQCPPLCTRFLP 330


>gi|297710110|ref|XP_002831748.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase 2-like [Pongo
           abelii]
          Length = 518

 Score =  135 bits (340), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 59/336 (17%), Positives = 106/336 (31%), Gaps = 64/336 (19%)

Query: 3   VVTVATWNVNSIRARIHNLA-------------AWIKENNPDIICLQETKTEDKNF--PF 47
           ++ V +WN+N IR  +  +A               + E + DI+CLQETK        P 
Sbjct: 1   MLRVVSWNINGIRRPLQGVANQEPSNCAAVAVGRILDELDADIVCLQETKVTRDALTEPL 60

Query: 48  ETLQSLN-YHIETCGQKSYNGVAILSKYQPIEI---------------VTHLPGDDLDVQ 91
             ++  N Y   +  +  Y+GVA   K     +                    G+  +  
Sbjct: 61  AIVEGYNSYFSFSRNRSGYSGVATFCKDNATPVAAEEGLSGLFATQNGDVGCYGNMDEFT 120

Query: 92  A---------------RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
                           +    T+    +TL + N+Y PH +P    +   K+ + +    
Sbjct: 121 QEELRALDSEGRALLTQHKIRTWEGKEKTLTLINVYCPHADPGRPERLVFKMRFYRLLQI 180

Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCY-----------NPIIWENDACFTLEVRQSFQK 185
            A   L     +I  GD N   +P D +               W +     L  + +   
Sbjct: 181 RAEALLAAGSHVIILGDLNTAHRPIDHWDAVNLECFEDDPGRKWMDSLLSNLGCQSASHV 240

Query: 186 LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT-SLLHSARIDTK 244
              +      +        ++ W     +   N G R+D+++           ++ +  +
Sbjct: 241 GPFIDSYRCFQP--KQEGAFTCWSAITGARHLNYGSRLDYVLGDRTLVIDTFQASFLLPE 298

Query: 245 PRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
             G    SDH PV   L +     KQ         P
Sbjct: 299 VMG----SDHCPVGAVLSVSSVPAKQCPPLCTRFLP 330


>gi|168008755|ref|XP_001757072.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162691943|gb|EDQ78303.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 536

 Score =  135 bits (340), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 50/290 (17%), Positives = 111/290 (38%), Gaps = 22/290 (7%)

Query: 4   VTVATWNVNSIRARIHNLAA--------WIKENNPDIICLQETKTEDKNFPFETLQSLNY 55
           + + +WNVN +R  + ++AA        + +  N DI+C QE K +++           Y
Sbjct: 82  MRIFSWNVNGLRTTLKDVAACHTSASNYFCQVLNADIVCFQEAKIQEEKLEKWIACVDGY 141

Query: 56  HIETCGQKSYNGVAILSKYQPI-------EIVTHLPGDDLDVQARFIEATFTINTQTLRI 108
           H      +   G + +  Y          +          +          T +   + +
Sbjct: 142 HSHWAFSREKKGYSGVVTYVKEALSPLDAKADWLGENSSAEDLCNEGRLMCTDHGSFVLL 201

Query: 109 GNLYLPHGN-PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167
                  G+      + D K+ ++K   +     +   + ++  GD+N+  +  D ++  
Sbjct: 202 NVYVPNSGDGDKGRPRLDFKMRYLKALEQTCDDLVRSGKHIVIVGDFNVAHKDIDVHSR- 260

Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227
            W+ +  ++LE R+      +           D  +++S WD  +D+ ++N+G+RID+ +
Sbjct: 261 -WKVEEIYSLEEREWLDGFLSRYIDLYRHFHPDEKNIFSVWDQKSDARTRNEGLRIDYAI 319

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL-DIPEPRKKQQDSTSQ 276
            +    + +    I        + SDH  V+V+L + P        + S 
Sbjct: 320 CNEGFLTEVLETDIVK---MQKQWSDHAAVVVTLKEQPNLPPHPAPALSS 366


>gi|291536334|emb|CBL09446.1| exodeoxyribonuclease III [Roseburia intestinalis M50/1]
          Length = 246

 Score =  135 bits (340), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 59/234 (25%), Positives = 100/234 (42%), Gaps = 12/234 (5%)

Query: 32  IICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQ 91
             C+QE+K ++       L     +     +K Y+G AI +K +P+ +   +  ++ D +
Sbjct: 24  FFCIQESKLQEGQIDL-PLPGYFSYWNYAKKKGYSGTAIFTKKEPLNVTYGIGIEEHDKE 82

Query: 92  ARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFA 151
            R I   +                 +     +   ++ W   F  +  + L+  +P+I  
Sbjct: 83  GRVITLEYPDFYM-----VTCYTPNSQNELARLPYRMQWEDDFRAYLKR-LDGSKPVILC 136

Query: 152 GDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDY 210
           GD N+  +  D  NP     +A F+ E R+   KL + GFTD  R  +     +YS+W Y
Sbjct: 137 GDLNVAHEEIDLKNPKTNRKNAGFSDEEREKMTKLLDAGFTDTFRYFYPDTEQIYSWWSY 196

Query: 211 YADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
              +  KN G RID+ + S      L  A+I T   G    SDH PV + +D+ 
Sbjct: 197 RFRAREKNAGWRIDYFITSKRMNDKLTGAKIHTDVFG----SDHCPVELDIDLS 246


>gi|194467701|ref|ZP_03073688.1| exodeoxyribonuclease III Xth [Lactobacillus reuteri 100-23]
 gi|194454737|gb|EDX43634.1| exodeoxyribonuclease III Xth [Lactobacillus reuteri 100-23]
          Length = 275

 Score =  135 bits (340), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 64/282 (22%), Positives = 103/282 (36%), Gaps = 29/282 (10%)

Query: 4   VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           +   +WN++SI A +            +   I    PD+I +QETK        + L  L
Sbjct: 1   MKFISWNIDSINAALTGTSVRAGETREVLQKIAAMKPDVIAIQETKLSKNGPTKKHLTVL 60

Query: 54  -----NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT----FTINTQ 104
                NY +                                + A           T+   
Sbjct: 61  QELFPNYEVAWRSSVEPARKGYAGTMYLYLAQYEPKITYPKINAPEPMDDEGRIITLEFP 120

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
              +  +Y P+         + +        R     L+ ++P+I +GD+N+  +  D  
Sbjct: 121 DFYVTEVYTPNSGNGLKRLDERQTWD--DCYRDYLHELDQQKPVIASGDFNVAHEEIDLA 178

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYY-ADSWSKNKGIR 222
           +P    + A FT E R  F KL   GFTD+ R  H     +YS+W      S   N G R
Sbjct: 179 HPATNHHSAGFTDEERTHFSKLLAAGFTDSFRHLHPDEKGVYSWWAQRVITSKQNNSGWR 238

Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           ID+ ++S      +  A  ID+  R      DHTP+I+ +D+
Sbjct: 239 IDYWLVSDRLADKITEAGMIDSGERR-----DHTPIILEIDL 275


>gi|330890926|gb|EGH23587.1| exodeoxyribonuclease III [Pseudomonas syringae pv. mori str.
           301020]
          Length = 259

 Score =  135 bits (340), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 66/264 (25%), Positives = 110/264 (41%), Gaps = 13/264 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC-- 60
           + + + NVN I+A +   L +W++  N D+ICLQ+T+           Q   Y +  C  
Sbjct: 1   MRIISVNVNGIQAAVERGLLSWLQAQNADVICLQDTRASTFELDDPAFQLDGYFLYACEA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
              +  GVA+ S+ QP  +++ L  +  D   R+++A F      + I  L  P G    
Sbjct: 61  EVPAQGGVALYSRLQPKAVISGLGFETADRYGRYLQADFD----KVSIATLLFPSG-MNG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF-TLEV 179
               + K   +  F ++  ++       I+ G   +  Q  D  N    +    F   E 
Sbjct: 116 DEDLNQKFKLMDDFGKYMDKQRRKRREYIYCGSLYVAQQKLDIKNWRDSQQSPGFLAPER 175

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
               + +  MG+ DA+R        YS W     +   N G R D+ +L+P     + SA
Sbjct: 176 AWMDEIVGTMGYVDALREVSREGDQYSGWPDNEQAEMLNLGWRFDYQILTPGLRRFVRSA 235

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
           R+  +PR     S H P+IV  D 
Sbjct: 236 RLPRQPR----FSQHAPLIVDYDW 255


>gi|297798308|ref|XP_002867038.1| endonuclease/exonuclease/phosphatase family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297312874|gb|EFH43297.1| endonuclease/exonuclease/phosphatase family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 616

 Score =  135 bits (340), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 50/352 (14%), Positives = 94/352 (26%), Gaps = 74/352 (21%)

Query: 4   VTVATWNVNSIRARIHNL---AAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           + + T+NVN +R R+         +   + DIIC QETK   +    +   +  Y     
Sbjct: 1   MKIVTYNVNGLRQRVSQFESLLKLLDSFDADIICFQETKLRRQELTADLAIADGYESFFS 60

Query: 61  GQKSY-----------------------------------------NGVAILSKYQPIEI 79
             ++                                          N     ++   +  
Sbjct: 61  CTRTCEKGRTGYSGVATFCRVKSASSSCEIALPVAAEEGITGLVNSNSRGGKNEMSAVGE 120

Query: 80  VTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFAS 139
                  +  ++          +     + N+Y P      + + + K  +     R   
Sbjct: 121 GLEEYEKEELLRIDQEGRCVITDHGHFVVFNVYGPRAVADDADRIEFKHRFYDILERRWE 180

Query: 140 QRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH 199
             L     +   GD NI P   D            F    R    +              
Sbjct: 181 CLLRQGRKVFVVGDLNIAPFAVDRCEAGPDFEKNEFRKWFRSLLVERGGSFSDVFRSKHP 240

Query: 200 DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE-------------ATSLLHSARIDTKPR 246
           +    ++ W     +   N G RIDHI+++                   ++   I T+ +
Sbjct: 241 ERKDAFTCWSSSTGAEQFNYGSRIDHILVAGSCLHQDEDKQGHSFLACHINECEILTEYK 300

Query: 247 GWT----------------KPSDHTPVIVSL-DIPEPRKKQQDSTSQNMKPI 281
            +                 K SDH PV  S  D+P+  +      +    P+
Sbjct: 301 RFKNENMATRWKGGLGTKLKGSDHVPVFTSFDDLPDIPEHSTPPLASRYLPM 352


>gi|109130906|ref|XP_001092143.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase 2 [Macaca
           mulatta]
          Length = 518

 Score =  135 bits (339), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 58/336 (17%), Positives = 105/336 (31%), Gaps = 64/336 (19%)

Query: 3   VVTVATWNVNSIRARIHNLA-------------AWIKENNPDIICLQETKTEDKNF--PF 47
           ++ V +WN+N IR  +  +A               + E + DI+CLQETK        P 
Sbjct: 1   MLRVVSWNINGIRRPVQGVANQEPSNCAAVAVGRILDELDADIVCLQETKVTRDALTEPL 60

Query: 48  ETLQSLN-YHIETCGQKSYNGVAILSKYQPIEI---------------VTHLPGDDLDVQ 91
             ++  N Y   +  +  Y+GVA   K     +                    G+  +  
Sbjct: 61  AIVEGYNSYFSFSRNRSGYSGVATFCKDNATPVAAEEGLSGLFATQNGNVGCYGNMDEFT 120

Query: 92  A---------------RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
                           +    T+    + L + N+Y PH +P    +   K+ + +    
Sbjct: 121 QEELRALDSEGRALLTQHKIRTWEGKERILTLINVYCPHADPGRPERLVFKMRFYRLLQI 180

Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCY-----------NPIIWENDACFTLEVRQSFQK 185
            A   L     +I  GD N   +P D +               W +     L  + +   
Sbjct: 181 RAEALLAAGSHVIILGDLNTAHRPIDHWDAVNLECFEEDPGRKWMDSLLSNLGCQSASHV 240

Query: 186 LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT-SLLHSARIDTK 244
              +      +        ++ W     +   N G R+D+++           ++ +  +
Sbjct: 241 GPFIDSYRCFQP--KQEGAFTCWSAVTGARHLNYGSRLDYVLGDRTLVIDTFRASFLLPE 298

Query: 245 PRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
             G    SDH PV   L +     KQ         P
Sbjct: 299 VMG----SDHCPVGAVLSVSSVPAKQCPPLCTRFLP 330


>gi|311347486|gb|ADP90688.1| DNA-apurinic or apyrimidinic site lyase 2 [Homo sapiens]
          Length = 518

 Score =  135 bits (339), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 59/336 (17%), Positives = 106/336 (31%), Gaps = 64/336 (19%)

Query: 3   VVTVATWNVNSIRARIHNLA-------------AWIKENNPDIICLQETKTEDKNF--PF 47
           ++ V +WN+N IR  +  +A               + E + DI+CLQETK        P 
Sbjct: 1   MLRVVSWNINGIRRPLQGVANQEPSNCAAVAVGRILDELDADIVCLQETKVTRDALTEPL 60

Query: 48  ETLQSLN-YHIETCGQKSYNGVAILSKYQPIEI---------------VTHLPGDDLDVQ 91
             ++  N Y   +  +  Y+GVA   K     +                    G+  +  
Sbjct: 61  AIVEGYNSYFSFSRNRSGYSGVATFCKDNATPVAAEEGLSGLFATQNGDVGCYGNMDEFT 120

Query: 92  A---------------RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
                           +    T+    +TL + N+Y PH +P    +   K+ + +    
Sbjct: 121 QEELRALDSEGRALLTQHKIRTWEGKEKTLTLINVYCPHADPGRPERLVFKMRFYRLLQI 180

Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCY-----------NPIIWENDACFTLEVRQSFQK 185
            A   L     +I  GD N   +P D +               W +     L  + +   
Sbjct: 181 RAEALLAAGSHVIILGDLNTAHRPIDHWDAVNLECFEEDPGRKWMDSLLSNLGCQSASHV 240

Query: 186 LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT-SLLHSARIDTK 244
              +      +        ++ W     +   N G R+D+++           ++ +  +
Sbjct: 241 GPFIDSYRCFQP--KQEGAFTCWSAVTGARYLNYGSRLDYVLGDRTLVIDTFQASFLLPE 298

Query: 245 PRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
             G    SDH PV   L +     KQ         P
Sbjct: 299 VMG----SDHCPVGAVLSVSSVPAKQCPPLCTRFLP 330


>gi|227544091|ref|ZP_03974140.1| exodeoxyribonuclease III [Lactobacillus reuteri CF48-3A]
 gi|300909790|ref|ZP_07127251.1| exodeoxyribonuclease III [Lactobacillus reuteri SD2112]
 gi|227185924|gb|EEI65995.1| exodeoxyribonuclease III [Lactobacillus reuteri CF48-3A]
 gi|300893655|gb|EFK87014.1| exodeoxyribonuclease III [Lactobacillus reuteri SD2112]
          Length = 275

 Score =  135 bits (339), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 64/282 (22%), Positives = 103/282 (36%), Gaps = 29/282 (10%)

Query: 4   VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           +   +WN++SI A +            +   I    PD+I +QETK        + L  L
Sbjct: 1   MKFISWNIDSINAALTGTSVRAGETREVLKKIAAMKPDVIAIQETKLSKNGPTKKHLTVL 60

Query: 54  -----NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT----FTINTQ 104
                NY +                                + A           T+   
Sbjct: 61  QELFPNYEVAWRSSVEPARKGYAGTMYLYLAQYEPKVTYPKINAPEPMDDEGRIITLEFP 120

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
              +  +Y P+         + +        R     L+ ++P+I +GD+N+  +  D  
Sbjct: 121 DFYVTEVYTPNSGNGLKRLDERQTWD--DCYRDYLHELDQQKPVIASGDFNVAHEEIDLA 178

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYY-ADSWSKNKGIR 222
           +P    + A FT E R  F KL   GFTD+ R  H     +YS+W      S   N G R
Sbjct: 179 HPATNHHSAGFTDEERTHFSKLLAAGFTDSFRHLHPDEKGVYSWWAQRVITSKQNNSGWR 238

Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           ID+ ++S      +  A  ID+  R      DHTP+I+ +D+
Sbjct: 239 IDYWLVSDRLADKITEAGMIDSGERR-----DHTPIILEIDL 275


>gi|161506683|ref|YP_001576633.1| exodeoxyribonuclease A [Lactobacillus helveticus DPC 4571]
 gi|260101796|ref|ZP_05752033.1| exodeoxyribonuclease [Lactobacillus helveticus DSM 20075]
 gi|160347672|gb|ABX26346.1| Exodeoxyribonuclease A [Lactobacillus helveticus DPC 4571]
 gi|260084387|gb|EEW68507.1| exodeoxyribonuclease [Lactobacillus helveticus DSM 20075]
          Length = 275

 Score =  135 bits (339), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 59/280 (21%), Positives = 106/280 (37%), Gaps = 25/280 (8%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTED-------KNFP 46
           + + +WN++S+ A +            +   I   NPDII +QETK          +   
Sbjct: 1   MILISWNIDSLNAALTGTSARAEETRGVLDKIHALNPDIIAIQETKLRATGPTKKHQTIL 60

Query: 47  FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
            E     +Y   +  + +  G A        E+   +    +       E    I  +  
Sbjct: 61  AEKFPEYDYVWRSSEEPARKGYAGTMYLYKKELTPAVSKPAIGAPEPMDEEGRIITLEFD 120

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
           +     +   N     K         +      ++L  ++P++ +GDYN      D  +P
Sbjct: 121 KYFVTQVYTPNSGNGLKRLADRQVWDQKYIEYLKKLNEKKPVLASGDYNCAHTEIDLKHP 180

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYY-ADSWSKNKGIRID 224
               + A FT E R  F  L + GFTD  R  +     +YS+W      + + N G RID
Sbjct: 181 ENNHHSAGFTDEERADFTNLLDAGFTDTFRKVNGNVEGVYSWWAQRVRTAKANNSGWRID 240

Query: 225 HIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           + ++S      +  +  IDT  R      DH P+++ +++
Sbjct: 241 YWLVSNRIADKVVRSEMIDTGKRA-----DHCPILLEINL 275


>gi|328467999|gb|EGF39023.1| exodeoxyribonuclease A [Lactobacillus helveticus MTCC 5463]
          Length = 275

 Score =  135 bits (339), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 59/280 (21%), Positives = 106/280 (37%), Gaps = 25/280 (8%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTED-------KNFP 46
           + + +WN++S+ A +            +   I   NPDII +QETK          +   
Sbjct: 1   MILISWNIDSLNAALTGTSARAEETRGVLDKIHALNPDIIAIQETKLRATGPTKKHQTIL 60

Query: 47  FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
            E     +Y   +  + +  G A        E+   +    +       E    I  +  
Sbjct: 61  AEKFPEYDYVWRSSEEPARKGYAGTMYLYKKELKPAVSKPAIGAPEPMDEEGRIITLEFD 120

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
           +     +   N     K         +      ++L  ++P++ +GDYN      D  +P
Sbjct: 121 KYFVTQVYTPNSGNGLKRLADRQVWDQKYIEYLKKLNEKKPVLASGDYNCAHTEIDLKHP 180

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYY-ADSWSKNKGIRID 224
               + A FT E R  F  L + GFTD  R  +     +YS+W      + + N G RID
Sbjct: 181 ENNHHSAGFTDEERADFTNLLDAGFTDTFRKVNGNVEGVYSWWAQRVRTAKANNSGWRID 240

Query: 225 HIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           + ++S      +  +  IDT  R      DH P+++ +++
Sbjct: 241 YWLVSNRIADKVVRSEMIDTGKRA-----DHCPILLEINL 275


>gi|227832356|ref|YP_002834063.1| putative exodeoxyribonuclease [Corynebacterium aurimucosum ATCC
           700975]
 gi|227453372|gb|ACP32125.1| putative exodeoxyribonuclease [Corynebacterium aurimucosum ATCC
           700975]
          Length = 302

 Score =  135 bits (339), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 56/307 (18%), Positives = 107/307 (34%), Gaps = 50/307 (16%)

Query: 1   MSVV--TVATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51
           M+ +  T+A+ NVN IRA           + AW++    D++ +QE +   +        
Sbjct: 1   MAGMSFTIASVNVNGIRAACKQRNENNPGMNAWLETTPADVVLMQEVRANPEQTQKALAP 60

Query: 52  SL--NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
           +L   +++      +     +    +       +         RFI AT       +R+ 
Sbjct: 61  ALEAGWNLVQAESAAKGRAGVGILSKHALGDVSVGFGSFAESGRFIAATVEG----VRVA 116

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
           +LYLP G+   S K D+K  ++  F     +        +  GD+NI  +  D  N    
Sbjct: 117 SLYLPSGDT-DSPKQDEKYLFLDEFSEVLDEMAATYPEAVIGGDWNICHRAQDLKNNKAN 175

Query: 170 ENDACFTLEVR---------------------------------QSFQKLQNMGFTDAIR 196
           E  +    E R                                  +++   +  + D  R
Sbjct: 176 EKKSGHLPEERAFMDRVFGSFPDEQPQDKKGLGNWLGVVDYETKTAWEAAADPQWFDVAR 235

Query: 197 ATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHT 255
             H      Y++W Y   +++ + G RID+   +           ++  P    + SDH+
Sbjct: 236 RLHPEADGPYTWWTYRGQAFNNDAGWRIDYQAATKAMLERAQRTWVEKAPTVEERWSDHS 295

Query: 256 PVIVSLD 262
           P++V   
Sbjct: 296 PLLVEYK 302


>gi|300811911|ref|ZP_07092372.1| exodeoxyribonuclease III [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
 gi|300497108|gb|EFK32169.1| exodeoxyribonuclease III [Lactobacillus delbrueckii subsp.
           bulgaricus PB2003/044-T3-4]
          Length = 275

 Score =  134 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 54/282 (19%), Positives = 110/282 (39%), Gaps = 29/282 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPF------ 47
           + + +WN++S+ A +            +   + + +PD++ LQETK              
Sbjct: 1   MRLISWNIDSLNAALTGTSPRAEMTRGVLKNLHDLDPDVLALQETKLPASGPSKKHQAAL 60

Query: 48  -ETLQSLNYHIETCGQKSY--NGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
            +     ++   +  + +       +    + ++ +   P         F     T+   
Sbjct: 61  ADLFPEYDFVWRSSMEPARKGYAGTMFLYKKGLDPLVTRPEIGAPEPMDFEGRILTLEFP 120

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
              +  +Y P+         D +     +  R   + L+ ++P++ +GD+N   Q  D  
Sbjct: 121 DFYVTQVYTPNAGNGLVRLGDRQ--EWDKCYRAYLEELDKKKPVLASGDFNAAYQEIDLK 178

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYY-ADSWSKNKGIR 222
           +P    + A FT E R  F +L   GFTD  R  H     +YS+W      + + N G R
Sbjct: 179 HPKNNHHSAGFTDEERAGFGQLLAAGFTDTFRQIHGQVEGVYSWWAQRVRTAKANNSGWR 238

Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           ID+ ++S      +  +  I+T  R      DH P+++ + +
Sbjct: 239 IDYWLVSNRLADQVEKSEMIETGERA-----DHCPILLEIKL 275


>gi|83595025|ref|YP_428777.1| exodeoxyribonuclease III xth [Rhodospirillum rubrum ATCC 11170]
 gi|83577939|gb|ABC24490.1| Exodeoxyribonuclease III xth [Rhodospirillum rubrum ATCC 11170]
          Length = 249

 Score =  134 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 58/248 (23%), Positives = 93/248 (37%), Gaps = 6/248 (2%)

Query: 21  LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN-YHIETCGQKSYNGVAILSKYQPIEI 79
           +A  ++    D++CLQE K    + P   L  +   H        YNGV I S+    + 
Sbjct: 1   MARLVESRAIDVLCLQEIKARPDHVPTAALAEMGLVHQALHTMPGYNGVGIFSRLPLEDS 60

Query: 80  VTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFAS 139
                     V  R +       T             +P  + ++  K+++      +  
Sbjct: 61  T--PFDWCDRVDCRHLRTRVAGFTLHCLYIPAGGDIPDPEENPRFRHKLAFFDALTDWFD 118

Query: 140 QRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN--MGFTDAIRA 197
           + L+ + P +  GD+N+ P   D ++          T         LQ          R 
Sbjct: 119 RTLDPDMPAMVVGDFNVAPLETDVWDHRKMRGVVSHTPVEVAKLGALQASGPWIDAMRRF 178

Query: 198 THDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTP 256
                 L+++W Y A  W   N+G R+DHI ++P     L    +    R WT PSDH P
Sbjct: 179 VPPEEKLFTWWSYRAKDWRLTNRGRRLDHIWVTPALVDRLRGLEVMDDTRDWTPPSDHVP 238

Query: 257 VIVSLDIP 264
           VIV +D P
Sbjct: 239 VIVHIDPP 246


>gi|321477228|gb|EFX88187.1| hypothetical protein DAPPUDRAFT_305561 [Daphnia pulex]
          Length = 476

 Score =  134 bits (338), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 56/310 (18%), Positives = 89/310 (28%), Gaps = 38/310 (12%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY---HIET 59
           +  + TWN+N IR+   NL         DIICLQETK         T     Y   +  +
Sbjct: 1   MFNIVTWNINGIRSSQQNLKDLFDSLGADIICLQETKITRDMLDESTALVDGYSSFYSFS 60

Query: 60  CGQKSYNGVAILSKYQPIEIVT-----HLPGDDLDVQARFIEATFTINTQTLR------- 107
             +  Y+GVA   K                    D    +     +   + LR       
Sbjct: 61  RKRSGYSGVATYCKNSYSPFQAEEGLAGTFNVHDDKIDFYDNVHSSFTDEGLRALDAEGR 120

Query: 108 -----------------IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIF 150
                            +              +   K+ + +         L     +I 
Sbjct: 121 CVMTLHKFKKEETSISLVVINVYCPNAGENDERLPYKLEFYRALNLRCHDFLSQGYYVIV 180

Query: 151 AGDYNIIPQPHDCYNPII--WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFW 208
            GD N+  +  D   P        +   L +     +                   ++ W
Sbjct: 181 LGDMNVSHRLIDHCEPEDVSSFPKSPSRLWLDGFLHEGGGKFVDSFRHLYPTKEKAFTCW 240

Query: 209 DYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268
           +    +   N G RID+I+LS + T  L    I +   G    SDH PV  SL +     
Sbjct: 241 NTKLSARVNNYGTRIDYILLSNQLTDALQDCIIMSDVYG----SDHCPVKSSLALDIIPS 296

Query: 269 KQQDSTSQNM 278
            +  +     
Sbjct: 297 TKLPALCTKF 306


>gi|88705453|ref|ZP_01103164.1| exodeoxyribonuclease III [Congregibacter litoralis KT71]
 gi|88700543|gb|EAQ97651.1| exodeoxyribonuclease III [Congregibacter litoralis KT71]
          Length = 253

 Score =  134 bits (337), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 61/264 (23%), Positives = 100/264 (37%), Gaps = 15/264 (5%)

Query: 4   VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + +++ + +R A       W+   + D IC+Q+ +  + +   +     +Y+      
Sbjct: 1   MRIISFSADGLREAAKRGFYDWLSRQDADFICIQDIRCSEYDLQDDVFFPSDYNAYFFDD 60

Query: 62  -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
                NGVAI  +  P  I+T L   D D+Q R+I+A +      L +G L  P  N   
Sbjct: 61  VNGKDNGVAIYCRALPKAIMTGLGFADFDMQGRYIQADYG----ELSVGCLLAPVANDGA 116

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   K  +         +        +  G++ I     D  N     N + F  E R
Sbjct: 117 VEEQKTKNEFFSLLGAHLEKVRNKRRKFLICGNWRIAHTAADMQNSAENSNRSGFLPEER 176

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           Q    L   G+ DA R   +    +S+W           G RID  ++S E    +  A 
Sbjct: 177 QWMDALLENGYRDAFRQVSNDSDAFSYWP----GERGEDGWRIDLQIISEELQYSVEHAA 232

Query: 241 IDTKPRGWTKPSDHTPVIVSLDIP 264
           I T        S H PVI+  DI 
Sbjct: 233 IYT----GESFSRHAPVIIDYDID 252


>gi|212697551|ref|ZP_03305679.1| hypothetical protein ANHYDRO_02124 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212675454|gb|EEB35061.1| hypothetical protein ANHYDRO_02124 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 275

 Score =  134 bits (337), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 63/280 (22%), Positives = 106/280 (37%), Gaps = 25/280 (8%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTED-------KNFP 46
           + + +WN++S+ A +           ++   I + + DIICLQETK          K   
Sbjct: 1   MKIISWNIDSLNAALTSDSNRAKMSRDVLDTIIKEDADIICLQETKLPRTGPSKKHKEIL 60

Query: 47  FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
                  NY   +  + +    A    +   E    +    LD      +    I  +  
Sbjct: 61  ESYFPQYNYAWISSQEPARKSYAGCLTFYKKEFEPIISYPTLDAPDTMDQEARLITLEFE 120

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
                 +   N  +     D      +      ++L+  +P+I  GD+N+  +  D  +P
Sbjct: 121 NFYLTQVYTPNAGSGLSRLDLRQVWDKKYANYLEKLDQNKPVIACGDFNVAHKEIDLKHP 180

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIRID 224
                 A FT E R  F  L N GF D  R  H D    Y++W      S   N G RID
Sbjct: 181 ENNHKSAGFTDEERSGFTNLLNKGFVDTFRYLHGDVEGKYTWWAQRVKTSKINNSGWRID 240

Query: 225 HIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           + ++S      +  +  ID+  R      DHTP+ +++D+
Sbjct: 241 YFIVSDRIKEKIKESDMIDSGDRQ-----DHTPIYINMDM 275


>gi|301792507|ref|XP_002931219.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase 2-like
           [Ailuropoda melanoleuca]
 gi|281349729|gb|EFB25313.1| hypothetical protein PANDA_022064 [Ailuropoda melanoleuca]
          Length = 516

 Score =  134 bits (337), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 57/334 (17%), Positives = 103/334 (30%), Gaps = 60/334 (17%)

Query: 3   VVTVATWNVNSIRARIHNLA-------------AWIKENNPDIICLQETKTEDKNF--PF 47
           ++ V +WN+N IR+ +  +                + + + DI+CLQETK        P 
Sbjct: 1   MLRVVSWNINGIRSPLQGMVYEEPSNCAAMAMGRILDKLDADIVCLQETKVTRDVLTEPL 60

Query: 48  ETLQSLN-YHIETCGQKSYNGVAILSKYQPIE------------IVTHLPGDDLDVQA-- 92
             ++  N Y   +  +  Y+GVA   K                       G   ++    
Sbjct: 61  AIIEGYNSYFSFSRNRSGYSGVATFCKDSVTPMAAEEGLSGLLATHNGDVGCYGNMDEFT 120

Query: 93  ----------------RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
                           +    T+    +TL + N+Y PH +     +   K+ + +    
Sbjct: 121 QEELRALDSEGRALLTQHKIRTWEGKEKTLTLINVYCPHADAGKPERLSFKMRFYRLLQI 180

Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYN----PIIWENDACFTLEVRQSFQKLQNMGFT 192
            A   L     +I  GD N   +P D ++        E+     ++   S    Q     
Sbjct: 181 RAEALLAAGSHVIILGDLNTAHRPIDHWDAVNLECFEEDPGRKWMDGLLSNLGCQAGSHV 240

Query: 193 DAI-----RATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT-SLLHSARIDTKPR 246
                            ++ W   + +   N G R+D+++            +    +  
Sbjct: 241 RPFIDSYRCFQPKQEGAFTCWSAVSGARHLNYGSRLDYVLGDRTLVIDTFQDSFRLPEVM 300

Query: 247 GWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
           G    SDH PV   L +     KQ         P
Sbjct: 301 G----SDHCPVGAVLSVSSMPAKQCPPLCTRFLP 330


>gi|116628715|ref|YP_813887.1| exonuclease III [Lactobacillus gasseri ATCC 33323]
 gi|282852356|ref|ZP_06261698.1| exodeoxyribonuclease III [Lactobacillus gasseri 224-1]
 gi|311111551|ref|ZP_07712948.1| exodeoxyribonuclease III [Lactobacillus gasseri MV-22]
 gi|116094297|gb|ABJ59449.1| Exonuclease III [Lactobacillus gasseri ATCC 33323]
 gi|282556098|gb|EFB61718.1| exodeoxyribonuclease III [Lactobacillus gasseri 224-1]
 gi|311066705|gb|EFQ47045.1| exodeoxyribonuclease III [Lactobacillus gasseri MV-22]
          Length = 275

 Score =  134 bits (337), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 64/280 (22%), Positives = 110/280 (39%), Gaps = 25/280 (8%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTED-------KNFP 46
           + + +WN++S+ A +            +   IKE +PDII +QETK          +   
Sbjct: 1   MRLISWNIDSLNAALTSDSARAKLTRGVLNTIKEKDPDIIAIQETKLRSTGPTKKHQEIL 60

Query: 47  FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
            E     +Y   +  + +  G A         +   +    +            +  +  
Sbjct: 61  AEMFPDYDYVWRSSEEPARKGYAGTMFLYKNTLAPEVTKPVIGAPEPMDHEGRILTLEFD 120

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
                 +   N     K  D             Q+L+  +P+I +GDYN+   P D  +P
Sbjct: 121 NYYVTQVYTPNSGNELKRLDDRQVWDEKYTEYLQKLDQNKPVIASGDYNVAHTPIDLKHP 180

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYY-ADSWSKNKGIRID 224
               ++A FT E RQ F KL  +GFTD  R  H     +YS+W      S + N G RID
Sbjct: 181 ESNHHNAGFTDEERQDFDKLLKLGFTDTFRKVHGNVEGVYSWWAQRVRTSKANNSGWRID 240

Query: 225 HIMLSPEATSLLHSARI-DTKPRGWTKPSDHTPVIVSLDI 263
           + ++S      +  + + DT  R      DH P+++ +++
Sbjct: 241 YYIVSNRIADQVTKSEMLDTGERK-----DHCPIMLEINL 275


>gi|238853021|ref|ZP_04643416.1| exodeoxyribonuclease III [Lactobacillus gasseri 202-4]
 gi|238834359|gb|EEQ26601.1| exodeoxyribonuclease III [Lactobacillus gasseri 202-4]
          Length = 275

 Score =  134 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 64/280 (22%), Positives = 110/280 (39%), Gaps = 25/280 (8%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTED-------KNFP 46
           + + +WN++S+ A +            +   IKE +PDII +QETK          +   
Sbjct: 1   MRLISWNIDSLNAALTSDSARAKLTRGVLNTIKEKDPDIIAIQETKLRSTGPTKKHQEIL 60

Query: 47  FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
            E     +Y   +  + +  G A         +   +    +            +  +  
Sbjct: 61  AEMFPDYDYVWRSSEEPARKGYAGTMFLYKNTLAPEVTKPVIAAPEPMDHEGRILTLEFD 120

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
                 +   N     K  D             Q+L+  +P+I +GDYN+   P D  +P
Sbjct: 121 NYYVTQVYTPNSGNELKRLDDRQVWDEKYTEYLQKLDQNKPVIASGDYNVAHTPIDLKHP 180

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYY-ADSWSKNKGIRID 224
               ++A FT E RQ F KL  +GFTD  R  H     +YS+W      S + N G RID
Sbjct: 181 ESNHHNAGFTDEERQDFDKLLKLGFTDTFRKVHGNVEGVYSWWAQRVRTSKANNSGWRID 240

Query: 225 HIMLSPEATSLLHSARI-DTKPRGWTKPSDHTPVIVSLDI 263
           + ++S      +  + + DT  R      DH P+++ +++
Sbjct: 241 YYIVSNRIADQVTKSEMLDTGERK-----DHCPIMLEINL 275


>gi|320547311|ref|ZP_08041602.1| exodeoxyribonuclease [Streptococcus equinus ATCC 9812]
 gi|320448009|gb|EFW88761.1| exodeoxyribonuclease [Streptococcus equinus ATCC 9812]
          Length = 275

 Score =  134 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 58/282 (20%), Positives = 101/282 (35%), Gaps = 29/282 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDK-------NFP 46
           + + +WN++S+ A +            +   +   + DII +QETK   K          
Sbjct: 1   MKLISWNIDSLNAALTSDSARAVLSRAVIDTLVAEDADIIAIQETKLSAKGPTKKHLQIL 60

Query: 47  FETLQSL--NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
            +       ++       +      +      +      P         +     T+   
Sbjct: 61  EDYFPDYQVSWRSSVEPARKGYAGTMFLYKNHLTPTISFPEIGAPDTMDYEGRIITLEFD 120

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
              +  +Y P+         + +I             L+  +P++  GDYN+     D  
Sbjct: 121 NFYVTQVYTPNAGDGLKRLTERQIWD--EKYADYLAELDQTKPVLATGDYNVAHNEIDLA 178

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIR 222
           NP      A FT E R  F  L   GFTD  R  H D  ++YS+W   +  S   N G R
Sbjct: 179 NPNSNRRSAGFTDEERAGFTNLLAKGFTDTFRYLHGDIPNVYSWWAQRSKTSKINNTGWR 238

Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           ID+ + S      +  +  ID+  R      DHTP+++ +D+
Sbjct: 239 IDYWLASNRIADKITKSEMIDSGTRQ-----DHTPIVLEIDL 275


>gi|262183784|ref|ZP_06043205.1| putative exodeoxyribonuclease [Corynebacterium aurimucosum ATCC
           700975]
          Length = 299

 Score =  134 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 57/305 (18%), Positives = 106/305 (34%), Gaps = 49/305 (16%)

Query: 1   MSVVTVATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           MS  T+A+ NVN IRA           + AW++    D++ +QE +   +        +L
Sbjct: 1   MS-FTIASVNVNGIRAACKQRNENNPGMNAWLETTPADVVLMQEVRANPEQTQKALAPAL 59

Query: 54  --NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
              +++      +     +    +       +         RFI AT       +R+ +L
Sbjct: 60  EAGWNLVQAESAAKGRAGVGILSKHALGDVSVGFGSFAESGRFIAATVEG----VRVASL 115

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
           YLP G+   S K D+K  ++  F     +        +  GD+NI  +  D  N    E 
Sbjct: 116 YLPSGDT-DSPKQDEKYLFLDEFSEVLDEMAATYPEAVIGGDWNICHRAQDLKNNKANEK 174

Query: 172 DACFTLEVR---------------------------------QSFQKLQNMGFTDAIRAT 198
            +    E R                                  +++   +  + D  R  
Sbjct: 175 KSGHLPEERAFMDRVFGSFPDEQPQDKKGLGNWLGVVDYETKTAWEAAADPQWFDVARRL 234

Query: 199 HDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257
           H      Y++W Y   +++ + G RID+   +           ++  P    + SDH+P+
Sbjct: 235 HPEADGPYTWWTYRGQAFNNDAGWRIDYQAATKAMLERAQRTWVEKAPTVEERWSDHSPL 294

Query: 258 IVSLD 262
           +V   
Sbjct: 295 LVEYK 299


>gi|295397847|ref|ZP_06807910.1| exodeoxyribonuclease III [Aerococcus viridans ATCC 11563]
 gi|294973892|gb|EFG49656.1| exodeoxyribonuclease III [Aerococcus viridans ATCC 11563]
          Length = 275

 Score =  134 bits (336), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 59/281 (20%), Positives = 107/281 (38%), Gaps = 27/281 (9%)

Query: 4   VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + + +WN++S+ A +            +   I+E+ PD+I +QETK   K    + L  +
Sbjct: 1   MKLISWNIDSLNAALTGASPRAELSREVLKMIREHQPDVIAIQETKLSAKGPTKKHLDII 60

Query: 54  -----NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDV----QARFIEATFTINTQ 104
                +Y +                    +           +       +     T+   
Sbjct: 61  EADVPDYKVVWVSSVEPARKGYAGTMFLYKKDYTPEVTFPQIGAPTTMDYEGRMITLEFT 120

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
              + N+Y P+     +   D ++  ++         L+ ++P+I  GD+N+     D  
Sbjct: 121 DFYVTNVYTPNAGSALARLEDRQVWDVQ--YANYLADLDAKKPVIACGDFNVAHTEIDLA 178

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIR 222
           +P      A FT E R  F  L N GFTD  R  H D   +Y++W      S   N G R
Sbjct: 179 HPKNNHFSAGFTDEERAGFTNLLNRGFTDTFRHIHGDVEGVYTWWAQRVKTSKINNSGWR 238

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           ID+ ++S      +  + +           DHTP+++ +DI
Sbjct: 239 IDYWLVSDRIADKVQKSEMLDSGTRQ----DHTPILLEIDI 275


>gi|311693190|gb|ADP96063.1| exodeoxyribonuclease III Xth [marine bacterium HP15]
          Length = 268

 Score =  133 bits (335), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 56/268 (20%), Positives = 99/268 (36%), Gaps = 12/268 (4%)

Query: 4   VTVATWNVNSI-RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + V + +VN + +A       W+ E + D++C+Q+ +          L    Y       
Sbjct: 1   MRVVSISVNGLAQAVEKGFFDWLAEQDADVVCVQDHRMRAYEIEDYNLIPEGYEAYFIDG 60

Query: 62  -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI- 119
            +    GV I +++ P  I+     +  D + RFI+A F   +    +    L   + + 
Sbjct: 61  EKNEDGGVGIYTRHFPKAIMYGFANEQADREGRFIQADFDKVSVACVLAPCALGREDELI 120

Query: 120 ---TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN-PIIWENDACF 175
                T  D K  +++ F     + L      IF  +        D        +     
Sbjct: 121 GEDDLTVLDHKDEFMESFGLHMQKTLRKRRQFIFCANLQTAHHVTDASPLYHKLDFSGFL 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
             E     +    MG  D  R  +   + +++W   A+   KN GIR+D+ +L+P     
Sbjct: 181 PHERAWLDRLFDEMGCVDGFREINKQSNQFTWWPEQAEGSRKNAGIRVDYQLLTPGIRKT 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +    ID   R      DH PVI+  DI
Sbjct: 241 IEDGWIDDSTRFC----DHAPVIMDYDI 264


>gi|302690596|ref|XP_003034977.1| hypothetical protein SCHCODRAFT_43911 [Schizophyllum commune H4-8]
 gi|300108673|gb|EFJ00075.1| hypothetical protein SCHCODRAFT_43911 [Schizophyllum commune H4-8]
          Length = 261

 Score =  133 bits (335), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 58/266 (21%), Positives = 100/266 (37%), Gaps = 19/266 (7%)

Query: 4   VTVATWNVNSI-RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL-NYHIETCG 61
           + +A WNV  +  ++      +++  +PDI+ L ETK  ++       +   + +     
Sbjct: 3   MRIAAWNVCGLATSQKKGFKFYVEAEDPDILVLSETKVNNETVDPALKERFPHSYWSIAE 62

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +KSY+G AILSK++ + +   LPG       +    T       +    +        T 
Sbjct: 63  KKSYSGTAILSKHKALSVTRTLPGHPDPNYTKGRIVTLEFENTYVVGTYVPNAGTGLKTL 122

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            + +              + L+ ++P+I+ GD N+ P   D  NP    N      E   
Sbjct: 123 NEKN----LWNEHFTTYIRDLDKKKPVIWTGDLNVAPTAIDLANPKTNWNKTPGYTEAET 178

Query: 182 SFQKL----------QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
           +  K            +  F D  R  H     Y+++ Y      KN G R+D  +LS  
Sbjct: 179 TAFKNILTPPSNAPEDSPRFIDVWRHLHPDTQHYTYFSYRFRCREKNLGWRLDMFVLSER 238

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPV 257
               +    I  +  G    SDH PV
Sbjct: 239 LLEKVKMCEIRDEIYG---ASDHCPV 261


>gi|301096360|ref|XP_002897277.1| exodeoxyribonuclease [Phytophthora infestans T30-4]
 gi|262107161|gb|EEY65213.1| exodeoxyribonuclease [Phytophthora infestans T30-4]
          Length = 362

 Score =  133 bits (335), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 57/251 (22%), Positives = 97/251 (38%), Gaps = 20/251 (7%)

Query: 5   TVATWNVNSIRARIH-----NLAAWIKENNPDIICLQETK-TEDKNFPFETL--QSLNYH 56
            +  WNVN +RA +      +L A++ + +PDI CL ETK   D+    E    Q  + +
Sbjct: 111 KIVAWNVNGLRAVLKRDESVHLRAYVAQEDPDIFCLSETKICRDELQKLEDFLPQYEHQY 170

Query: 57  IETCGQKSYNGVAILSKYQPIEIV----------THLPGDDLDVQARFIEATFTINTQTL 106
                +K Y   AI +K +P+ +             +       + +          +  
Sbjct: 171 WSCAIKKGYASTAIFTKTKPLSVKDEIVVGDHDSKGVAKSANGGKDQEGRFLALEFPKFW 230

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
            +       G  +    +                      P+I+ GD N+  Q  D +NP
Sbjct: 231 LVHTYVPNAGGKLERLDFRTTQWDKAMHREMKEMEKTK--PVIWCGDLNVAHQEIDIHNP 288

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226
                 A FT E R+SF ++   GF D  R  H     YS++ Y  +  +KNKG R+D+ 
Sbjct: 289 KGNHKSAGFTDEERESFGEILEDGFVDTFRHLHPDTVEYSYFGYRHNMRAKNKGWRLDYF 348

Query: 227 MLSPEATSLLH 237
           ++S +    + 
Sbjct: 349 VVSEKLLPHVR 359


>gi|300253219|gb|ADJ96599.1| APEX-like DNA repair enzyme [Camelus dromedarius]
          Length = 283

 Score =  133 bits (335), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 62/230 (26%), Positives = 105/230 (45%), Gaps = 13/230 (5%)

Query: 2   SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQ----SLNYH 56
           + + + +WNV+ +RA I      W+KE  PDI+CLQETK  +   P E  +       Y 
Sbjct: 60  ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPPELQELSGLPHQYW 119

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                ++ Y+GV +LS+  PI++   +  ++ D + R I A        + +       G
Sbjct: 120 SAPSDKEGYSGVGLLSRQCPIKVSYGIGEEEHDQEGRVIVAE---FDAFVLVTVYVPNAG 176

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
             +   +Y  +     R      + L   +PL+  GD N+  +  D  NP   + +A FT
Sbjct: 177 RGLVRLEYRQRWDEAFRKF---LKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFT 233

Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRID 224
             E +   + LQ +   D+ R  +    + Y+FW Y  ++ SKN G R+D
Sbjct: 234 PQERQGFGELLQAVPLADSFRHLYPNTAYAYTFWTYMMNARSKNVGWRLD 283


>gi|148227204|ref|NP_001086779.1| APEX nuclease (apurinic/apyrimidinic endonuclease) 2 [Xenopus
           laevis]
 gi|50415222|gb|AAH77433.1| Apex2-prov protein [Xenopus laevis]
          Length = 517

 Score =  133 bits (334), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 65/330 (19%), Positives = 103/330 (31%), Gaps = 57/330 (17%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNF--PFETLQSLN-YHIETC 60
           + + +WN+N IRA    L   +   + DIICLQETK        P   ++  N Y   + 
Sbjct: 1   MKIVSWNINGIRATRVGLKETLDSLDADIICLQETKVTRDLLDEPSAIVEGYNSYFSFSR 60

Query: 61  GQKSYNGVAILSKYQPIE---------IVTHLPGDDLDVQA------------------- 92
            +  Y+GVA   K              +  +  G                          
Sbjct: 61  VRSGYSGVATFCKSSTTPQAAEEGLSGVFCNRTGSVGCYGNTEQFLEEELQSLDQEGRAV 120

Query: 93  --RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIF 150
             +          +TL + N+Y P  +P    +   K+ +       A   L+    +I 
Sbjct: 121 LTQHRILNCEDKEETLTVINVYCPRADPEKPERKTYKLRFYHLLQTRAEAILQNGGHVII 180

Query: 151 AGDYNIIPQPHDCYNP-----------IIWENDACFTLEVRQ-------SFQKLQNMGFT 192
            GD N   +P D  +P             W N         Q             +  F 
Sbjct: 181 LGDVNTSHRPLDHCDPTDLETFEENPGRQWLNQFLGDPIPSQKGDSETVMPPSAGSGLFY 240

Query: 193 DAIRATHDTHH-LYSFWDYYADSWSKNKGIRIDHIMLSPEATSL-LHSARIDTKPRGWTK 250
           D+ R  H T    ++ W   + +   N G RID+I+ + E        + I  +  G   
Sbjct: 241 DSFRYFHPTQKNAFTCWCSASGARQTNYGTRIDYILGNRELVESEFLDSVIMPEVEG--- 297

Query: 251 PSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
            SDH PV   +        +         P
Sbjct: 298 -SDHCPVKAFMKCQPIAANKCPPLCTKYLP 326


>gi|320094390|ref|ZP_08026175.1| exodeoxyribonuclease III [Actinomyces sp. oral taxon 178 str.
           F0338]
 gi|319978676|gb|EFW10234.1| exodeoxyribonuclease III [Actinomyces sp. oral taxon 178 str.
           F0338]
          Length = 275

 Score =  133 bits (334), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 42/273 (15%), Positives = 84/273 (30%), Gaps = 15/273 (5%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
            +TV T N+N IRA        W++E  P  + +QE +  ++      L      +    
Sbjct: 2   TLTVTTVNLNGIRAAHKRGFLDWLEEAAPTALLMQEVRAPEE-ISRGILPGQWDSVWVPC 60

Query: 62  QKSYNGVAILSKYQPIEIVTHLP--------GDDLDVQARFIEATFTINTQTLRIGNLYL 113
           +        ++ ++    +   P         D    +   +          +R+ + Y 
Sbjct: 61  RIKGRAGVGIAVHRDRGALVGPPRTALDGAESDADSGRWLEVLVEADGAPSPVRLVSAYF 120

Query: 114 PHGNPITSTK---YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ--PHDCYNPII 168
             G   T  +            R     +      E  +  GD+N++        +    
Sbjct: 121 HSGEKDTPKQEAKMAHLPRIGARMAELLASAASGGEQAVVCGDFNVVRSRADIKNWTSNH 180

Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
            +       E+    + ++                 YS+W +   ++  + G R+D+   
Sbjct: 181 NKRAGVLDEEIAFLNRWVEEGWHDVVRDLAGQVQGPYSWWTWRGQAFDNDAGWRLDYQFA 240

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           +P       S  I   P    + SDH PV V  
Sbjct: 241 TPGLARAARSFTIGRAPSYDQRFSDHAPVGVVY 273


>gi|289423957|ref|ZP_06425750.1| exodeoxyribonuclease III [Peptostreptococcus anaerobius 653-L]
 gi|289155734|gb|EFD04406.1| exodeoxyribonuclease III [Peptostreptococcus anaerobius 653-L]
          Length = 275

 Score =  133 bits (334), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 59/282 (20%), Positives = 106/282 (37%), Gaps = 29/282 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQ-- 51
           + + +WN++S+ A +            +   I + +PDII LQETK   K    + ++  
Sbjct: 1   MRLISWNIDSLNAALTSDSARALLSREVLKTIIDLDPDIIGLQETKLSVKGLTKKHIEII 60

Query: 52  -------SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
                     Y       +      +    + + +    P         F     T+   
Sbjct: 61  EEMLPDYEYVYRSSVEPARKGYAGTMFLYKKGMNVKVSYPEIGAPTTMDFEGRIITLELD 120

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
              +  +Y P+         + ++   K       + L+ ++P++  GDYN+     D  
Sbjct: 121 DCYVTQVYTPNAGDGLRRLEERQVWDCK--YMEYLKTLDEDKPVLACGDYNVAHNEIDLA 178

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYAD-SWSKNKGIR 222
           NP        FT E R  F  L   GF D  R  +      YS+W      S   N G R
Sbjct: 179 NPASNHMSPGFTDEERAGFTNLLGAGFVDTFRHKNGMVEGAYSWWAQRVKTSKINNTGWR 238

Query: 223 IDHIMLSPEATSLLHSA-RIDTKPRGWTKPSDHTPVIVSLDI 263
           ID+ ++S      + S+  +D+ PR      DHTP+++ +++
Sbjct: 239 IDYWLVSERVADRVESSIMVDSGPRQ-----DHTPILMDINL 275


>gi|74007458|ref|XP_548620.2| PREDICTED: similar to apurinic/apyrimidinic endonuclease 2 [Canis
           familiaris]
          Length = 487

 Score =  133 bits (334), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 54/311 (17%), Positives = 100/311 (32%), Gaps = 42/311 (13%)

Query: 3   VVTVATWNVNSIRARIHNLA-------------AWIKENNPDIICLQETK-------TED 42
           ++ V +WN+N IR+ +  +                + + + DI+CLQETK        +D
Sbjct: 1   MLRVVSWNINGIRSPLQGMVYEEPSNCAAMAMGRILDKLDADIVCLQETKVTSVATFCKD 60

Query: 43  KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV---THLPGDDLDVQARFIEATF 99
              P    + L     +    ++NG                  L  +   +  +    T+
Sbjct: 61  SATPMAAEEGL-----SGLLATHNGDVGCYGNMDEFTQEELRALDSEGRALLTQHKIRTW 115

Query: 100 TINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159
               +TL + N+Y PH +     +   K+ + +     A   L     +I  GD N    
Sbjct: 116 EGKQKTLTLINVYCPHADAGKPERLTFKMRFYRLLQIRAEALLAAGSHVIILGDLNTAHC 175

Query: 160 PHDCYN----PIIWENDACFTLEVRQSFQKLQNMGFTDAI-----RATHDTHHLYSFWDY 210
           P D ++        E+     ++   S    Q                      ++ W  
Sbjct: 176 PIDHWDAVNLECFEEDPGRKWMDGLLSNLGCQAGSHVRPFIDSYRCFQPKQEGAFTCWSA 235

Query: 211 YADSWSKNKGIRIDHIMLSPEAT-SLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKK 269
            + +   N G R+D+++            + +  +  G    SDH PV   L +     K
Sbjct: 236 VSGARHLNYGSRLDYVLGDRTLVIDTFQDSFLLPEVMG----SDHCPVGAVLSVSSVPAK 291

Query: 270 QQDSTSQNMKP 280
           Q         P
Sbjct: 292 QCPPLCTRFLP 302


>gi|325479409|gb|EGC82505.1| exodeoxyribonuclease III [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 273

 Score =  133 bits (334), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 60/279 (21%), Positives = 104/279 (37%), Gaps = 27/279 (9%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTED-------KNFP 46
           +   +WN++S+ A +            +   IK  + D+I LQETK          K   
Sbjct: 1   MKFISWNIDSLNAALTSDSNRAVMSREVLETIKREDADVIALQETKLPKSGPSKKHKEKL 60

Query: 47  FETLQSLNYHIETCGQ--KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
            E     +Y      +  +      +    + +++    P  D      F     T+   
Sbjct: 61  AEFFPDYDYVWTCSCEGARKSYAGTMTLYKKGLDVTETFPKIDAPGTMDFEGRIVTLEFD 120

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
                 +Y P+         D +I           + L+  +P+I +GD+N+   P D  
Sbjct: 121 DFYFTQVYTPNAGNGLVRLADRQIWD--EKYADYLEGLDKIKPVIASGDFNVAHTPIDLA 178

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYAD-SWSKNKGIR 222
           +P        FT E R+ F +L   GFTD  R  +      Y++W      S   N G R
Sbjct: 179 HPENNHISPGFTDEEREGFTRLLARGFTDTFRHLNKDLEGAYTWWAQRVKTSKINNSGWR 238

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           ID+ ++S      + S+ I     G  +  DHTP+++ +
Sbjct: 239 IDYFLVSDRLMERVKSSTIINS--GDRQ--DHTPIMLEI 273


>gi|227486633|ref|ZP_03916949.1| exodeoxyribonuclease III [Anaerococcus lactolyticus ATCC 51172]
 gi|227235345|gb|EEI85360.1| exodeoxyribonuclease III [Anaerococcus lactolyticus ATCC 51172]
          Length = 275

 Score =  133 bits (334), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 57/282 (20%), Positives = 107/282 (37%), Gaps = 29/282 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQ-- 51
           +   +WN++S+ A +            +   + + N D+I +QETK        + +   
Sbjct: 1   MKFISWNIDSLNAALTSDSARAIMSRLVLDTVIKENADVIAIQETKLPYTGLSKKHIAKL 60

Query: 52  -------SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
                     Y       +      +    + +++    P         F     T+   
Sbjct: 61  AEYFPDYDYVYRSSEDPARKSYAGTMTLYKKGLKVEPTYPQIGAPCTMDFEGRIITLEFD 120

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
                ++Y P+     +   D ++    +      + L+  +P+I AGD+N+  +  D  
Sbjct: 121 NFYFTHVYTPNAGNGLTRLADRQVWD--KLYADYLKSLDQNKPVIAAGDFNVAHEEIDLA 178

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYAD-SWSKNKGIR 222
           +P        FT E R+ F  L   GFTD  R  H      Y++W      S   N G R
Sbjct: 179 HPENNHESPGFTDEEREGFTNLLAKGFTDTFRHIHGRVEGKYTWWAQRVKTSKINNSGWR 238

Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           ID+ ++S     L+ ++  ID+  R      DHTP+++ ++I
Sbjct: 239 IDYFLVSERIKDLITNSDMIDSGERQ-----DHTPIVLEINI 275


>gi|332109264|gb|EGJ10187.1| exodeoxyribonuclease III Xth [Rubrivivax benzoatilyticus JA2]
          Length = 227

 Score =  133 bits (334), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 57/230 (24%), Positives = 97/230 (42%), Gaps = 8/230 (3%)

Query: 35  LQETKTEDKNFP--FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQA 92
           +QE K +  +    FE +  L+ H     +K Y+GV + ++++P ++V    G + D + 
Sbjct: 1   MQEVKAQAADVAGRFERVGGLDGHFHFAQKKGYSGVGLYTRHEPSDVVVGFDGGEFDAEG 60

Query: 93  RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG 152
           R+IE  F    + L I + Y P G+                 L+     L+ E   I  G
Sbjct: 61  RWIELRFDKPGRKLSIISCYFPSGSSGEER--QAAKYRFLDLLQPHLMALKAEREFILVG 118

Query: 153 DYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYA 212
           D NI  +  D  N    + ++ F  E R    +L + G  D  R  +     Y++W    
Sbjct: 119 DVNIAHKEIDLKNWRGNQKNSGFLPEERAWMTRLLDSGVVDVFRRLNPQPEQYTWWSNRG 178

Query: 213 DSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
            +W+KN G R+D+ + +P         +I    R     SDH P+ +  D
Sbjct: 179 QAWAKNVGWRLDYHLATPALAETARREQIFLAQR----FSDHAPLTIDYD 224


>gi|58336406|ref|YP_192991.1| exodeoxyribonuclease A [Lactobacillus acidophilus NCFM]
 gi|227902538|ref|ZP_04020343.1| exodeoxyribonuclease A [Lactobacillus acidophilus ATCC 4796]
 gi|58253723|gb|AAV41960.1| exodeoxyribonuclease A [Lactobacillus acidophilus NCFM]
 gi|227869627|gb|EEJ77048.1| exodeoxyribonuclease A [Lactobacillus acidophilus ATCC 4796]
          Length = 275

 Score =  132 bits (333), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 62/282 (21%), Positives = 109/282 (38%), Gaps = 29/282 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTED-------KNFP 46
           + + +WN++S+ A +            +   I   NPDII +QETK +        +   
Sbjct: 1   MILISWNIDSLNAALTGTSARAEETRQVLEKIHAKNPDIIAIQETKLKATGPTKKHQEIL 60

Query: 47  FETLQSLNYHIETCGQKSY--NGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
            E     NY   +  + +       +    + +  +   P               T+   
Sbjct: 61  AEKFPEYNYVWRSSEEPARKGYAGTMYLYKKDLTPIVSYPVIGAPEPMDCEGRIITLEFN 120

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
              +  +Y P+         D ++   K       Q L+  +P++ +GDYN      D  
Sbjct: 121 DFYVTQVYTPNSGSGLKRLSDRQVWDQK--YTKYLQELDKHKPVLASGDYNCAHTEIDLK 178

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYAD-SWSKNKGIR 222
           +P    + A FT E R  F  L N GFTD  R  H     +YS+W      +   N G R
Sbjct: 179 HPNNNHHSAGFTDEERSGFTNLLNAGFTDTFRKVHGNITDVYSWWAQRVKTAKINNSGWR 238

Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           ID+ ++S    + +  +  IDT+ R      DH P+++ +++
Sbjct: 239 IDYWLVSNRIANKVVRSEMIDTEKRA-----DHCPILLEINL 275


>gi|312867077|ref|ZP_07727287.1| exodeoxyribonuclease III [Streptococcus parasanguinis F0405]
 gi|311097206|gb|EFQ55440.1| exodeoxyribonuclease III [Streptococcus parasanguinis F0405]
          Length = 275

 Score =  132 bits (333), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 62/283 (21%), Positives = 102/283 (36%), Gaps = 31/283 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + + +WN++S+ A +            +   +   + DII +QETK   K    + L+ L
Sbjct: 1   MKLISWNIDSLNAALTSDSARAKLSQEVLQTLVAEDADIIAIQETKLSAKGPTKKHLEIL 60

Query: 54  -----NYHIETCGQKS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
                 Y       +      Y G   L K +   +VT                      
Sbjct: 61  EELFPGYEKTWRSSQEPARKGYAGTMFLYKKELTPVVTFPEIGAPSTMDLEGRIITLEFD 120

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
           +           G+ +   +                  L+ E+P++  GDYN+  +  D 
Sbjct: 121 KFFVTQVYTPNAGDGLKRLEERQVWDVKYAEY---LAELDKEKPVLATGDYNVAHKEIDL 177

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221
            NP        FT E R+ F  L   GFTD  R  H D    Y++W   +  S   N G 
Sbjct: 178 ANPASNRRSPGFTDEEREGFTNLLAKGFTDTFRHVHGDVPERYTWWAQRSKTSKINNTGW 237

Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           RID+ + S      +  +  ID+  R      DHTP+++ +D+
Sbjct: 238 RIDYWLTSNRVADKVTKSDMIDSGARQ-----DHTPIVLEIDL 275


>gi|148544314|ref|YP_001271684.1| exodeoxyribonuclease III Xth [Lactobacillus reuteri DSM 20016]
 gi|184153692|ref|YP_001842033.1| exodeoxyribonuclease [Lactobacillus reuteri JCM 1112]
 gi|227365036|ref|ZP_03849073.1| exodeoxyribonuclease III Xth [Lactobacillus reuteri MM2-3]
 gi|325681652|ref|ZP_08161172.1| exodeoxyribonuclease [Lactobacillus reuteri MM4-1A]
 gi|148531348|gb|ABQ83347.1| exodeoxyribonuclease III Xth [Lactobacillus reuteri DSM 20016]
 gi|183225036|dbj|BAG25553.1| exodeoxyribonuclease [Lactobacillus reuteri JCM 1112]
 gi|227069924|gb|EEI08310.1| exodeoxyribonuclease III Xth [Lactobacillus reuteri MM2-3]
 gi|324978964|gb|EGC15911.1| exodeoxyribonuclease [Lactobacillus reuteri MM4-1A]
          Length = 275

 Score =  132 bits (333), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 64/282 (22%), Positives = 103/282 (36%), Gaps = 29/282 (10%)

Query: 4   VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           +   +WN++SI A +            +   I    PD+I +QETK        + L  L
Sbjct: 1   MKFISWNIDSINAALTGTSVRAGETREVLKKIAVMKPDVIAIQETKLSKNGPTKKHLTVL 60

Query: 54  -----NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT----FTINTQ 104
                NY +                                + A           T+   
Sbjct: 61  QELFPNYEVAWRSSVEPARKGYAGTMYLYLAQYEPKVTYPKINAPEPMDDEGRIITLEFP 120

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
              +  +Y P+         + +        R     L+ ++P+I +GD+N+  +  D  
Sbjct: 121 DFYVTEVYTPNSGNGLKRLDERQTWD--DCYRDYLHELDQQKPVIASGDFNVAHEEIDLA 178

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYY-ADSWSKNKGIR 222
           +P    + A FT E R  F KL   GFTD+ R  H     +YS+W      S   N G R
Sbjct: 179 HPATNHHSAGFTDEERTHFSKLLAAGFTDSFRHLHPDEKGVYSWWAQRVITSKQNNSGWR 238

Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           ID+ ++S      +  A  ID+  R      DHTP+I+ +D+
Sbjct: 239 IDYWLVSDRLADKITEAGMIDSGERR-----DHTPIILEIDL 275


>gi|71989536|ref|NP_001021584.1| EXOnuclease family member (exo-3) [Caenorhabditis elegans]
 gi|3879014|emb|CAB03235.1| C. elegans protein R09B3.1a, confirmed by transcript evidence
           [Caenorhabditis elegans]
 gi|3941298|gb|AAC82328.1| exonuclease III homolog [Caenorhabditis elegans]
          Length = 288

 Score =  132 bits (333), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 70/266 (26%), Positives = 114/266 (42%), Gaps = 21/266 (7%)

Query: 5   TVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH-----I 57
               WNV  +RA +        + E  PD++ L ETK ++  +P E  ++   +     +
Sbjct: 35  KFVCWNVAGLRACVKKSDFKEVLAEE-PDLVFLGETKCKE--WPPEMEETFKNYTKTLVV 91

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
            T     Y GV +LSK  P+++   +   + D   R I A F+           Y+P+  
Sbjct: 92  STEKNGGYAGVGLLSKCAPMKVHKGIGDPEFDTAGRLIIAEFS----KFYFIGAYVPNSG 147

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND-ACFT 176
                             +        ++P+I+ GD N+     D  NP    N  A FT
Sbjct: 148 AKLVNLEKRGRWEKLLTEKMKEMD--EKKPVIYGGDLNVAHNEIDLKNPESNRNKTAGFT 205

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
            + R  F ++  +GFTD  RA H     YSFW Y A+S  K+ G R+D+ ++S    + +
Sbjct: 206 DQERGWFSEMLELGFTDTFRAMHPDEKKYSFWSYLANSRQKDVGWRLDYYVVSNRIMNKV 265

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLD 262
             + I +   G    SDH PV++ +D
Sbjct: 266 KRSDIMSSVMG----SDHAPVVMQID 287


>gi|227505350|ref|ZP_03935399.1| possible exodeoxyribonuclease III [Corynebacterium striatum ATCC
           6940]
 gi|227198052|gb|EEI78100.1| possible exodeoxyribonuclease III [Corynebacterium striatum ATCC
           6940]
          Length = 307

 Score =  132 bits (333), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 56/306 (18%), Positives = 99/306 (32%), Gaps = 48/306 (15%)

Query: 3   VVTVATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDK--NFPFETLQSL 53
             T+A+ NVN IRA           +  W++E   D++ +QE +   K            
Sbjct: 2   TFTIASVNVNGIRAACKQRNENNPGMNVWLEETTADVVLMQEVRANPKETQKALAPALEA 61

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
            +H+      +     +    +       +         RFI AT       +R+ +LYL
Sbjct: 62  GWHLVQAESAAKGRAGVGILSRTPLSDVSVGFGSFSESGRFIAATVDAEGGPVRVASLYL 121

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
           P G+   S K D+K  ++  F    +         +  GD+NI  +  D  N    E  +
Sbjct: 122 PSGDT-DSPKQDEKYLFLDEFSEVLADLAATYPQAVIGGDWNICHRAQDLKNNKSNEKKS 180

Query: 174 CFTLEVRQSFQKLQN--------------------------------------MGFTDAI 195
               E R     +                                          +  A 
Sbjct: 181 GHLPEERAFMDHVFGSFPDELPQDKKGLGDYLGVIDYATNTDWSARVPGEDAVQWYDVAR 240

Query: 196 RATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHT 255
           R   D    Y++W Y   +++ + G RID+   +           ++  P    + SDH+
Sbjct: 241 RLAPDADGPYTWWTYRGQAFNNDAGWRIDYQAATKAMLERAEKTWVEKAPTVEQRWSDHS 300

Query: 256 PVIVSL 261
           P++V  
Sbjct: 301 PLLVQY 306


>gi|104773315|ref|YP_618295.1| exodeoxyribonuclease III [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|116513293|ref|YP_812199.1| exonuclease III [Lactobacillus delbrueckii subsp. bulgaricus ATCC
           BAA-365]
 gi|103422396|emb|CAI96933.1| Exodeoxyribonuclease III [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|116092608|gb|ABJ57761.1| Exonuclease III [Lactobacillus delbrueckii subsp. bulgaricus ATCC
           BAA-365]
 gi|325124912|gb|ADY84242.1| Exodeoxyribonuclease A [Lactobacillus delbrueckii subsp. bulgaricus
           2038]
          Length = 275

 Score =  132 bits (333), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 56/282 (19%), Positives = 110/282 (39%), Gaps = 29/282 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPF------ 47
           + + +WN++S+ A +            +   + + +PD++ LQETK              
Sbjct: 1   MRLISWNIDSLNAALTGTSPRAEMTRGVLKNLHDLDPDVLALQETKLPASGPSKKHQAAL 60

Query: 48  -ETLQSLNYHIETCGQKSY--NGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
            +     ++   +  + +       +    + +E V   P         F     T+   
Sbjct: 61  ADLFPEYDFVWRSSMEPARKGYAGTMFLYKKGLEPVVTRPEIGAPEPMDFEGRILTLEFP 120

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
              +  +Y P+         D +     +  R   + L+ ++P++ +GD+N   Q  D  
Sbjct: 121 DFYVTQVYTPNAGNGLVRLGDRQEWD--KCYRAYLEELDKKKPVLASGDFNAAYQEIDLK 178

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYY-ADSWSKNKGIR 222
           +P    + A FT E R  F +L   GFTD  R  H     +YS+W      + + N G R
Sbjct: 179 HPENNHHSAGFTDEERAGFGQLLAAGFTDTFRQIHGQVEGVYSWWAQRVRTAKANNSGWR 238

Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           ID+ ++S      +  +  I+T  R      DH P+++ + +
Sbjct: 239 IDYWLVSNRLADQVEKSEMIETGERA-----DHCPILLEVKL 275


>gi|259503288|ref|ZP_05746190.1| exodeoxyribonuclease [Lactobacillus antri DSM 16041]
 gi|259168743|gb|EEW53238.1| exodeoxyribonuclease [Lactobacillus antri DSM 16041]
          Length = 275

 Score =  132 bits (332), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 61/282 (21%), Positives = 103/282 (36%), Gaps = 29/282 (10%)

Query: 4   VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           +   +WN++SI A +            +   +    PD + +QETK        + LQ L
Sbjct: 1   MKFISWNIDSINAALTGTSTRAGETRAVLKKLAALEPDAVAIQETKLSKNGPTKKHLQVL 60

Query: 54  -----NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA----TFTINTQ 104
                 Y +                                + A           T+   
Sbjct: 61  ADLFPGYQVAWRSSVEPARKGYAGTMYLYREQYQPTISYPQIGAPEPMDSEGRIITLEFP 120

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
              +  +Y P+         + +        R     L+ ++P+I +GD+N+  +  D  
Sbjct: 121 DFFLTEVYTPNSGNGLKRLAEREQWD--DCYRDYLHELDQQKPVIASGDFNVAHEEIDLA 178

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYA-DSWSKNKGIR 222
           +P    + A FT E R  F KL + GFTD+ R  H      YS+W      S   N G R
Sbjct: 179 HPANNHHSAGFTDEERTHFGKLLDAGFTDSFRFLHPDQAGAYSWWAQRVLTSKQNNSGWR 238

Query: 223 IDHIMLSPEATSLLHSA-RIDTKPRGWTKPSDHTPVIVSLDI 263
           ID+ ++S      + S+  ID+  R      DHTP+++ +D+
Sbjct: 239 IDYWLISDRLADRVSSSTMIDSGERR-----DHTPIMLEIDL 275


>gi|300362647|ref|ZP_07058823.1| exodeoxyribonuclease III [Lactobacillus gasseri JV-V03]
 gi|300353638|gb|EFJ69510.1| exodeoxyribonuclease III [Lactobacillus gasseri JV-V03]
          Length = 275

 Score =  132 bits (332), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 64/280 (22%), Positives = 111/280 (39%), Gaps = 25/280 (8%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTED-------KNFP 46
           + + +WN++S+ A +            +   IKE +PDII +QETK          +   
Sbjct: 1   MRLISWNIDSLNAALTSDSARAKLTRGVLNTIKEKDPDIIAIQETKLRATGPTKKHQEIL 60

Query: 47  FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
            E     +Y   +  + +  G A         +   +    +            +  +  
Sbjct: 61  AEMFPDYDYVWRSSEEPARKGYAGTMFLYKNTLTPEVTKPVIGAPEPMDHEGRILTLEFD 120

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
                 +   N     K  D             Q+L+  +P+I +GDYN+   P D  +P
Sbjct: 121 NYYVTQVYTPNSGNELKRLDDRQVWDEKYTEYLQKLDQVKPVIASGDYNVAHTPIDLKHP 180

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYY-ADSWSKNKGIRID 224
               ++A FT E RQ F KL  +GFTD  R  H     +YS+W      S + N G RID
Sbjct: 181 ENNHHNAGFTDEERQDFDKLLKLGFTDTFRKIHGNVEGVYSWWAQRVRTSKANNSGWRID 240

Query: 225 HIMLSPEATSLLHSARI-DTKPRGWTKPSDHTPVIVSLDI 263
           + ++S    + +  + + DT  R      DH P+++ +++
Sbjct: 241 YYIVSNRIANQITKSEMLDTGERK-----DHCPIMLEINL 275


>gi|238757025|ref|ZP_04618213.1| Exodeoxyribonuclease III [Yersinia aldovae ATCC 35236]
 gi|238704855|gb|EEP97384.1| Exodeoxyribonuclease III [Yersinia aldovae ATCC 35236]
          Length = 228

 Score =  132 bits (332), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 64/227 (28%), Positives = 100/227 (44%), Gaps = 8/227 (3%)

Query: 45  FPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
           FP E +    YH+   GQK + GVA+L+K +P+ +    P D+ D Q R I A       
Sbjct: 2   FPLEDVSQHGYHVFYHGQKGHYGVALLTKQEPLAVRRGFPTDEEDAQRRIIMADIATPQG 61

Query: 105 TLRIGNLYLPHGNPITST-KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP--- 160
            L + N Y P G       K+  K  +      +  Q+L  +  ++  GD NI P     
Sbjct: 62  PLTVINGYFPQGESRDHPTKFPAKERFYADLQNYLEQQLSADAQVLIMGDLNISPTDLDI 121

Query: 161 ---HDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWS 216
               +     +      F  E R   ++LQN G  D  RA +   +  +S++DY +  + 
Sbjct: 122 GIGEESRKRWLRTGKCSFLPEERAWLERLQNWGLVDTFRAANPDCNQQFSWFDYRSRGFD 181

Query: 217 KNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +N+G+RID ++ S    +   +  ID   R   KPSDH PV     +
Sbjct: 182 ENRGLRIDLLLASQPLAARCIATGIDYDIRSMEKPSDHAPVWSEFAL 228


>gi|227893773|ref|ZP_04011578.1| exodeoxyribonuclease III [Lactobacillus ultunensis DSM 16047]
 gi|227864418|gb|EEJ71839.1| exodeoxyribonuclease III [Lactobacillus ultunensis DSM 16047]
          Length = 275

 Score =  132 bits (332), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 60/280 (21%), Positives = 105/280 (37%), Gaps = 25/280 (8%)

Query: 4   VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTED-------KNFP 46
           + + +WN++S+ A +            +   I   NPDII +QETK          +   
Sbjct: 1   MILISWNIDSLNAALTGTSSRAGETREVLDKIHAANPDIIAIQETKLRAIGPTKKHQAVL 60

Query: 47  FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
            E     NY   +  + +  G A        E+        +   A        I  +  
Sbjct: 61  AEKFPEYNYVWRSSEEPARKGYAGTMYLYKKELTPKASYPVIGAPAPMDSEGRMITLEFD 120

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
           +     +   N     +         +      + L+ ++P++ +GD+N      D  +P
Sbjct: 121 KFFVTQVYTPNSGNGLRRLADRQVWDQKYVDYLEALDKQKPVLASGDFNCAHTEIDLKHP 180

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYY-ADSWSKNKGIRID 224
               + A FT E R  F  L N GFTD  R  H     +YS+W      + + N G RID
Sbjct: 181 ENNHHSAGFTDEERADFTNLLNGGFTDTFRKIHGNITDVYSWWAQRVRTAKANNSGWRID 240

Query: 225 HIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           + ++S      +  +  IDT  R      DH P+++ +++
Sbjct: 241 YWLVSNRIADKVVRSEMIDTGKRA-----DHCPILLEINL 275


>gi|322389122|ref|ZP_08062685.1| exodeoxyribonuclease [Streptococcus parasanguinis ATCC 903]
 gi|321144164|gb|EFX39579.1| exodeoxyribonuclease [Streptococcus parasanguinis ATCC 903]
          Length = 282

 Score =  132 bits (332), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 65/285 (22%), Positives = 102/285 (35%), Gaps = 31/285 (10%)

Query: 2   SVVTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDK---NFPFE 48
           + + + +WN++S+ A +            +   +   + DII +QETK   K       E
Sbjct: 6   NTMKLISWNIDSLNAALTSDSARAKLSQEVLQTLVAEDADIIAIQETKLSAKGPTKKHLE 65

Query: 49  TLQSLNYHIETCGQKS-------YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI 101
            L+ L    E   + S       Y G   L K +   IVT                    
Sbjct: 66  ILEELFPQYENTWRSSQESARKGYAGTMFLYKKELSPIVTFPEIGAPSTMDLEGRIITLE 125

Query: 102 NTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161
                         G+ +                      L+ E+P++  GDYN+  +  
Sbjct: 126 FDGFFVTQVYTPNAGDGLKRLAERQVWDVKYAEY---LADLDKEKPVLATGDYNVAHKEI 182

Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNK 219
           D  NP        FT E R+ F  L   GFTD  R  H D    Y++W   +  S   N 
Sbjct: 183 DLANPASNRRSPGFTDEEREGFTNLLAKGFTDTFRHVHGDVPERYTWWAQRSKTSKINNT 242

Query: 220 GIRIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           G RID+ + S      +  +  ID+  R      DHTP+++ +D+
Sbjct: 243 GWRIDYWLTSNRIADKVTKSDMIDSGARQ-----DHTPIVLEIDL 282


>gi|66910408|gb|AAH97053.1| Apex1 protein [Danio rerio]
 gi|197246969|gb|AAI64240.1| Apex1 protein [Danio rerio]
          Length = 296

 Score =  132 bits (332), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 65/258 (25%), Positives = 111/258 (43%), Gaps = 22/258 (8%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNV+ +RA +  N   W+++           K    +          Y   +  +
Sbjct: 55  MKITSWNVDGLRAWVKKNGLDWVRKE----------KALPADITGMPEYPHKYWAGSEDK 104

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           + Y+GVA+L K +P+ +   +  ++ D + R I A F                       
Sbjct: 105 EGYSGVAMLCKTEPLNVTYGIGKEEHDKEGRVITAEFPDF-----FLVTAYVPNASRGLV 159

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           + D + +W   F  +    L+  +PL+  GD N+  Q  D  NP     +A FT E R+ 
Sbjct: 160 RLDYRKTWDVDFRAY-LCGLDARKPLVLCGDLNVAHQEIDLKNPKGNRKNAGFTPEEREG 218

Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           F +L   GFTD+ R  +    + Y+FW Y  ++ SKN G R+D+ +LS      L  ++I
Sbjct: 219 FTQLLEAGFTDSFRELYPDQAYAYTFWTYMMNARSKNVGWRLDYFVLSSALLPGLCDSKI 278

Query: 242 DTKPRGWTKPSDHTPVIV 259
                G    SDH P+ +
Sbjct: 279 RNTAMG----SDHCPITL 292


>gi|282882297|ref|ZP_06290928.1| exodeoxyribonuclease III [Peptoniphilus lacrimalis 315-B]
 gi|281297847|gb|EFA90312.1| exodeoxyribonuclease III [Peptoniphilus lacrimalis 315-B]
          Length = 275

 Score =  132 bits (332), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 60/282 (21%), Positives = 107/282 (37%), Gaps = 29/282 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTED-------KNFP 46
           +   +WN++S+ A +            + + I++ +PD+  +QETK          K   
Sbjct: 1   MKFISWNIDSLNAALTSSSNRAILTRAVLSSIRDEDPDLFAVQETKLPPTGLSKKHKEIL 60

Query: 47  FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTH--LPGDDLDVQARFIEATFTINTQ 104
            +  Q  +Y   T  +++    A    +   ++      P               T+  +
Sbjct: 61  EKEFQDYSYVYVTSKEEARKSYAGTMIFYKKDLECKATYPEIGAPGSMDMEGRIVTLEFK 120

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
                 +Y P+         D ++   K         L+  +PL+  GD+N+  +  D  
Sbjct: 121 DFYFSTVYTPNAGDGLKRLSDRQVWDKKYLEYCQE--LDKNKPLVLCGDFNVAHKEIDLA 178

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIR 222
           NP      A FT E R  F  L   GF D  R  + D    Y++W      S   N G R
Sbjct: 179 NPNNNHFSAGFTDEERTGFTNLLEGGFVDTFRLINGDVEGKYTWWAQRIKTSKINNSGWR 238

Query: 223 IDHIMLSPEATSLLHSA-RIDTKPRGWTKPSDHTPVIVSLDI 263
           ID+ ++S      +  +  +D+  R      DHTP+I+ +D+
Sbjct: 239 IDYFLVSQRIKDRVKKSHMMDSGQRQ-----DHTPIILEIDL 275


>gi|225869981|ref|YP_002745928.1| exodeoxyribonuclease [Streptococcus equi subsp. equi 4047]
 gi|225699385|emb|CAW92824.1| exodeoxyribonuclease [Streptococcus equi subsp. equi 4047]
          Length = 275

 Score =  132 bits (332), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 63/283 (22%), Positives = 103/283 (36%), Gaps = 31/283 (10%)

Query: 4   VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + + +WN++S+ A +            +   +   + DII +QETK   K    + L+SL
Sbjct: 1   MKLISWNIDSLNAALTGESPRALLSRAVLDTLVAQDADIIAIQETKLSAKGPTKKHLESL 60

Query: 54  -NYHIETCGQKSYN---------GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
             Y          +         G   L K +   IVT                      
Sbjct: 61  LGYFPNHLNVWRSSVEPARKGYAGTMFLYKKELNPIVTFPDIGAPTTMDAEGRIITLEFN 120

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                       G+ +   +                 +L+ ++P++  GDYN+  +  D 
Sbjct: 121 DFFVTQVYTPNAGDGLRRLEERQLWDQKYADY---LAQLDAQKPVLATGDYNVAHKEIDL 177

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221
            NP        FT E R  F  L N GFTD  R  H D  ++YS+W   +  S   N G 
Sbjct: 178 ANPASNHRSPGFTDEERLGFTNLLNRGFTDTFRFIHGDIPNVYSWWAQRSKTSKLNNTGW 237

Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           RID+ + S      +  +  I +  R      DHTP+++ +D+
Sbjct: 238 RIDYWLTSNRLIDKVSRSEMISSGERQ-----DHTPILLEIDL 275


>gi|195977651|ref|YP_002122895.1| exodeoxyribonuclease ExoA [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|195974356|gb|ACG61882.1| exodeoxyribonuclease ExoA [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
          Length = 275

 Score =  132 bits (332), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 63/283 (22%), Positives = 103/283 (36%), Gaps = 31/283 (10%)

Query: 4   VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + + +WN++S+ A +            +   +   + DII +QETK   K    + L+SL
Sbjct: 1   MKLISWNIDSLNAALTGESPRALLSRAVLDTLVAQDADIIAIQETKLSAKGPTKKHLESL 60

Query: 54  -NYHIETCGQKSYN---------GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
             Y          +         G   L K +   IVT                      
Sbjct: 61  LGYFPNHLNVWRSSVEPARKGYAGTMFLYKKELNPIVTFPDIGAPTTMDAEGRIITLEFD 120

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                       G+ +   +                 +L+ ++P++  GDYN+  +  D 
Sbjct: 121 DFFVTQVYTPNAGDGLRRLEERQLWDQKYADY---LAQLDAQKPVLATGDYNVAHKEIDL 177

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221
            NP        FT E R  F  L N GFTD  R  H D  ++YS+W   +  S   N G 
Sbjct: 178 ANPASNHRSPGFTDEERLGFTNLLNRGFTDTFRFIHGDIPNVYSWWAQRSKTSKLNNTGW 237

Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           RID+ + S      +  +  I +  R      DHTP+++ +D+
Sbjct: 238 RIDYWLTSNRLIDKVSRSEMISSGERQ-----DHTPILLEIDL 275


>gi|227878040|ref|ZP_03996030.1| exodeoxyribonuclease III [Lactobacillus crispatus JV-V01]
 gi|256843761|ref|ZP_05549248.1| exodeoxyribonuclease III [Lactobacillus crispatus 125-2-CHN]
 gi|256849680|ref|ZP_05555112.1| exodeoxyribonuclease A [Lactobacillus crispatus MV-1A-US]
 gi|262047734|ref|ZP_06020686.1| exodeoxyribonuclease III [Lactobacillus crispatus MV-3A-US]
 gi|293381982|ref|ZP_06627943.1| exodeoxyribonuclease III [Lactobacillus crispatus 214-1]
 gi|312977037|ref|ZP_07788786.1| exodeoxyribonuclease III [Lactobacillus crispatus CTV-05]
 gi|227862358|gb|EEJ69887.1| exodeoxyribonuclease III [Lactobacillus crispatus JV-V01]
 gi|256613666|gb|EEU18868.1| exodeoxyribonuclease III [Lactobacillus crispatus 125-2-CHN]
 gi|256713796|gb|EEU28785.1| exodeoxyribonuclease A [Lactobacillus crispatus MV-1A-US]
 gi|260571939|gb|EEX28507.1| exodeoxyribonuclease III [Lactobacillus crispatus MV-3A-US]
 gi|290921438|gb|EFD98479.1| exodeoxyribonuclease III [Lactobacillus crispatus 214-1]
 gi|310896365|gb|EFQ45430.1| exodeoxyribonuclease III [Lactobacillus crispatus CTV-05]
          Length = 275

 Score =  132 bits (331), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 61/280 (21%), Positives = 109/280 (38%), Gaps = 25/280 (8%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTED-------KNFP 46
           + + +WN++S+ A +            +   I + NPDII +QETK          K   
Sbjct: 1   MILISWNIDSLNAALTGTSARAEETRQVLTKIHDANPDIIAIQETKLRATGPTKKHKEVL 60

Query: 47  FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
            E     +Y   +  + +  G A         +   +    +            I  +  
Sbjct: 61  AEKFPEYDYVWRSSEEPARKGYAGTMYLYKKGLTPAVSEPIIGAPEPMDHEGRIITLEFD 120

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
           +     +   N  +  K   +     +      Q+L+ ++P++ +GDYN      D  +P
Sbjct: 121 KCFVTQVYTPNSGSGLKRLAERQVWDQKYIEYLQKLDEKKPVLASGDYNCAHTEIDLKHP 180

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYY-ADSWSKNKGIRID 224
               + A FT E R  F  L N GFTD  R  H +   +YS+W      + + N G RID
Sbjct: 181 ENNHHSAGFTDEERVDFTNLLNAGFTDTFRKVHGEITGVYSWWAQRVRTAKANNSGWRID 240

Query: 225 HIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           + ++S      +  +  IDT  R      DH P+++ +++
Sbjct: 241 YWLVSNRIADKVVRSEMIDTGKRA-----DHCPILLEINL 275


>gi|126666553|ref|ZP_01737531.1| Exonuclease III [Marinobacter sp. ELB17]
 gi|126628941|gb|EAZ99560.1| Exonuclease III [Marinobacter sp. ELB17]
          Length = 268

 Score =  132 bits (331), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 56/268 (20%), Positives = 96/268 (35%), Gaps = 12/268 (4%)

Query: 4   VTVATWNVNSI-RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + V + +VN + +A       WI   + D+IC+Q+ +          L    Y       
Sbjct: 1   MRVVSISVNGLEQAVGKGFFDWIAGQDADVICVQDHRMRAYEVEDRQLVPEGYEAYFIDG 60

Query: 62  -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL----YLPHG 116
                 GV I +++ P  I+     +  D + RFI+A F   +    +            
Sbjct: 61  ENNEDGGVGIYTRHFPKAIMYGFANEQADREGRFIQADFDKVSVACVLAPCALGLEDDPI 120

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
                T  D K  ++  F     + L      I   +        D        + + F 
Sbjct: 121 GGDDLTVLDHKDDFMDAFGVHMQKTLRKRRQFIVCANLQSAHHVTDASPRYHKLDVSGFL 180

Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
             E     +  + MG  DA R  +   + +++W  +A  W K  GIR+D+ + +P     
Sbjct: 181 PHERAWLDRLFEEMGSIDAFRDINKQSNQFTWWPEWASGWRKQSGIRVDYQIATPGIRKT 240

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +    ID   R     SDH PV++  DI
Sbjct: 241 IQDGWIDDDTR----FSDHAPVVMDYDI 264


>gi|322375755|ref|ZP_08050267.1| exodeoxyribonuclease III [Streptococcus sp. C300]
 gi|321279463|gb|EFX56504.1| exodeoxyribonuclease III [Streptococcus sp. C300]
          Length = 275

 Score =  132 bits (331), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 60/283 (21%), Positives = 100/283 (35%), Gaps = 31/283 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + + +WN++S+ A +            +   +   N DII +QETK   K    + L+ L
Sbjct: 1   MKLISWNIDSLNAALTSDSARAKLSQEVLQTLVAENADIIAIQETKLSAKGPTKKHLEIL 60

Query: 54  -----NYHIETCGQKS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
                 Y       +      Y G   L K +    ++                      
Sbjct: 61  EELFPGYENAWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAPSTMDLEGRIITLEFD 120

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                       G+ +   +                 +L+ E+P++  GDYN+  +  D 
Sbjct: 121 TFFVTQVYTPNAGDGLKRLEERQVWDVKYAEY---LAQLDKEKPVLATGDYNVAHKEIDL 177

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221
            NP        FT E R  F  L   GFTD  R  H D    Y++W   +  S   N G 
Sbjct: 178 ANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHIHGDVPERYTWWAQRSKTSKINNTGW 237

Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           RID+ + S      +  +  ID+  R      DHTP+++ +++
Sbjct: 238 RIDYWLTSNRVADKVTKSDMIDSGARQ-----DHTPIVLEIEL 275


>gi|55296320|dbj|BAD68138.1| putative DNA-(apurinic or apyrimidinic site) lyase (ARP) [Oryza
           sativa Japonica Group]
 gi|55297697|dbj|BAD68287.1| putative DNA-(apurinic or apyrimidinic site) lyase (ARP) [Oryza
           sativa Japonica Group]
          Length = 307

 Score =  132 bits (331), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 65/268 (24%), Positives = 115/268 (42%), Gaps = 19/268 (7%)

Query: 4   VTVATWNVNSIRARI--HNL--AAWIKENNPDIICLQETKTEDKNFPF--ETLQSLN-YH 56
           + + +WN+N +   +           +  N D++CLQET  E+K+       +   + Y 
Sbjct: 51  MKILSWNINGLHDVVTTKGFSARDLAQRENFDVLCLQETHLEEKDVEKFKNLIADYDSYW 110

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
             +  +  Y+G A++S+ +PI +   +   + D + R I   F        + N Y+P+ 
Sbjct: 111 SCSVSRLGYSGTAVISRVKPISVQYGIGIREHDHEGRVITLEFDG----FYLVNAYVPNS 166

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
                   + +++          + LE  +P+I AGD N   Q  D +NP      A FT
Sbjct: 167 GRFLRR-LNYRVNNWDPCFSNYVKILEKSKPVIVAGDLNCARQSIDIHNPPAKTKSAGFT 225

Query: 177 LEVRQSFQKLQNMG-FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
           +E R+SF+   +     D  R  H     Y+FW    +    NKG R+D+ + S   T  
Sbjct: 226 IEERESFETNFSSKGLVDTFRKQHPNAVGYTFWG--ENQRITNKGWRLDYFLASESITDK 283

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +H + I          SDH+P+ + L +
Sbjct: 284 VHDSYILPDV----SFSDHSPIGLVLKL 307


>gi|115440517|ref|NP_001044538.1| Os01g0801100 [Oryza sativa Japonica Group]
 gi|113534069|dbj|BAF06452.1| Os01g0801100 [Oryza sativa Japonica Group]
          Length = 310

 Score =  132 bits (331), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 65/268 (24%), Positives = 115/268 (42%), Gaps = 19/268 (7%)

Query: 4   VTVATWNVNSIRARI--HNL--AAWIKENNPDIICLQETKTEDKNFPF--ETLQSLN-YH 56
           + + +WN+N +   +           +  N D++CLQET  E+K+       +   + Y 
Sbjct: 54  MKILSWNINGLHDVVTTKGFSARDLAQRENFDVLCLQETHLEEKDVEKFKNLIADYDSYW 113

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
             +  +  Y+G A++S+ +PI +   +   + D + R I   F        + N Y+P+ 
Sbjct: 114 SCSVSRLGYSGTAVISRVKPISVQYGIGIREHDHEGRVITLEFDG----FYLVNAYVPNS 169

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
                   + +++          + LE  +P+I AGD N   Q  D +NP      A FT
Sbjct: 170 GRFLRR-LNYRVNNWDPCFSNYVKILEKSKPVIVAGDLNCARQSIDIHNPPAKTKSAGFT 228

Query: 177 LEVRQSFQKLQNMG-FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
           +E R+SF+   +     D  R  H     Y+FW    +    NKG R+D+ + S   T  
Sbjct: 229 IEERESFETNFSSKGLVDTFRKQHPNAVGYTFWG--ENQRITNKGWRLDYFLASESITDK 286

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +H + I          SDH+P+ + L +
Sbjct: 287 VHDSYILPDV----SFSDHSPIGLVLKL 310


>gi|300813916|ref|ZP_07094220.1| exodeoxyribonuclease III [Peptoniphilus sp. oral taxon 836 str.
           F0141]
 gi|300511979|gb|EFK39175.1| exodeoxyribonuclease III [Peptoniphilus sp. oral taxon 836 str.
           F0141]
          Length = 275

 Score =  132 bits (331), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 60/282 (21%), Positives = 108/282 (38%), Gaps = 29/282 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTED-------KNFP 46
           +   +WN++S+ A +            + + I++ +PD+  +QETK          K   
Sbjct: 1   MKFISWNIDSLNAALTSSSNRAILTRAVLSSIRDEDPDLFAVQETKLPPTGLSKKHKEIL 60

Query: 47  FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTH--LPGDDLDVQARFIEATFTINTQ 104
            +  Q  +Y   T  +++    A    +   ++      P               T+  +
Sbjct: 61  EKEFQDYSYVYVTSKEEARKSYAGTMIFYKKDLECKATYPEIGAPGSMDMEGRILTLEFK 120

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
                 +Y P+         D ++   K         L+  +PL+  GD+N+  +  D  
Sbjct: 121 DFYFSTVYTPNAGDGLKRLSDRQVWDKKYLEYCQE--LDKNKPLVLCGDFNVAHKEIDLA 178

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIR 222
           NP      A FT E R  F  L + GF D  R  + D    Y++W      S   N G R
Sbjct: 179 NPNNNHFSAGFTDEERMGFTNLLDGGFVDTFRLINGDVEGKYTWWAQRIKTSKINNSGWR 238

Query: 223 IDHIMLSPEATSLLHSA-RIDTKPRGWTKPSDHTPVIVSLDI 263
           ID+ ++S      +  +  +D+  R      DHTP+I+ +D+
Sbjct: 239 IDYFLVSQRIKDKVKKSHMMDSGQRQ-----DHTPIILEIDL 275


>gi|41055919|ref|NP_956440.1| DNA-(apurinic or apyrimidinic site) lyase 2 [Danio rerio]
 gi|28278715|gb|AAH44527.1| Zgc:55889 [Danio rerio]
 gi|182890762|gb|AAI65311.1| Zgc:55889 protein [Danio rerio]
          Length = 558

 Score =  131 bits (330), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 56/333 (16%), Positives = 96/333 (28%), Gaps = 59/333 (17%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + TWN+N IR   + +   +   + DIIC+QETK        +T     Y+      +
Sbjct: 1   MKIVTWNINGIRTFKNGIKKILDSFDADIICVQETKVTRDLLDEKTAIVDGYNSYFSFSR 60

Query: 64  SYNG---------------------VAILSKYQPIEIVTHLP-----------GDDLDVQ 91
             +G                       +LS    +                   ++    
Sbjct: 61  GRSGYSGVATYCKDAATPFLAEEGLTGLLSNQGAVIGCYGDQVELTSEELLALDNEGRAV 120

Query: 92  ARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFA 151
                       Q L + N+Y P  +P    + + K+ + +     A   L     +I  
Sbjct: 121 ITQHHFIGQDGLQKLTVINVYCPRADPDKPERKEFKLQFYRLLQCRAEAILSSGSHVIIL 180

Query: 152 GDYNIIPQPHDCYNPI--IWENDACFTLEVRQSFQKLQN--------------------- 188
           GD N   +P D  +P       D      + Q   +                        
Sbjct: 181 GDVNTSHRPIDHCDPDDVDNFEDNPGRKWLDQFLFETAENSENGNAADEPAEDFQESASG 240

Query: 189 MGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRG 247
             F D+ R  H    + ++ W     +   N G RID+I  +      + +  I      
Sbjct: 241 GKFVDSFRYFHPKRSNAFTCWSTLTGARQTNYGTRIDYIFSNHSL---VKTFFIGVDIMP 297

Query: 248 WTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
             + SDH PV   L        +         P
Sbjct: 298 EVEGSDHCPVWAQLSCTLQSSPRCPPVCTRHMP 330


>gi|71910153|ref|YP_281703.1| exodeoxyribonuclease III [Streptococcus pyogenes MGAS5005]
 gi|71852935|gb|AAZ50958.1| exodeoxyribonuclease III [Streptococcus pyogenes MGAS5005]
          Length = 303

 Score =  131 bits (330), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 59/283 (20%), Positives = 101/283 (35%), Gaps = 31/283 (10%)

Query: 4   VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + + +WN++S+ A +            +   +   + DII +QETK   K    + +++L
Sbjct: 29  MKLISWNIDSLNAALTGESPRALLSRAVLDTLVAQDADIIAIQETKLSAKGPTKKHIETL 88

Query: 54  -NYHIETCGQKSYN---------GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
            +Y          +         G   L K     ++T                      
Sbjct: 89  LSYFPNYLHVWRSSVEPARKGYAGTMFLYKNTLNPVITFPEIGAPTTMDAEGRIITLEFE 148

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                       G+ +                      L+ ++P++  GDYN+  +  D 
Sbjct: 149 DFFVTQVYTPNAGDGLRRLDDRQIWDHKYADY---LTELDAQKPVLATGDYNVAHKEIDL 205

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221
            NP        FT E RQ F  L   GFTD  R  H D  H+Y++W   +  S   N G 
Sbjct: 206 ANPNSNRRSPGFTDEERQGFTNLLARGFTDTFRHVHGDIPHVYTWWAQRSKTSKINNTGW 265

Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           RID+ + S      +  +  I +  R      DHTP+++ +D+
Sbjct: 266 RIDYWLASNRLVDKVKRSEMISSGERQ-----DHTPILLDIDL 303


>gi|169833563|ref|YP_001695212.1| exodeoxyribonuclease III [Streptococcus pneumoniae Hungary19A-6]
 gi|168996065|gb|ACA36677.1| exodeoxyribonuclease III [Streptococcus pneumoniae Hungary19A-6]
          Length = 275

 Score =  131 bits (330), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 61/283 (21%), Positives = 98/283 (34%), Gaps = 31/283 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + + +WN++S+ A +            +   +   N DII +QETK   K    + L+ L
Sbjct: 1   MKLISWNIDSLNAALTSDSARAKLSQEVLQTLVAENADIIAIQETKLSAKGPTKKHLEIL 60

Query: 54  -----NYHIETCGQKS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
                 Y       +      Y G   L K +    ++                      
Sbjct: 61  EELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAPSTMDLEGRIITLEFD 120

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                       G+ +   +                  L+ E+P++  GDYN+     D 
Sbjct: 121 AFFVTQVYTPNAGDGLKRLEERQVWDVKYAEY---LAELDKEKPVLATGDYNVAHNEIDL 177

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221
            NP        FT E R  F  L   GFTD  R  H D    Y++W   +  S   N G 
Sbjct: 178 ANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHVHGDVPERYTWWAQRSKTSKINNTGW 237

Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           RID+ + S      +  +  ID+  R      DHTP+++ +D+
Sbjct: 238 RIDYWLTSNRIADKVTKSDMIDSGARQ-----DHTPIVLEIDL 275


>gi|322373458|ref|ZP_08047994.1| exodeoxyribonuclease III [Streptococcus sp. C150]
 gi|321278500|gb|EFX55569.1| exodeoxyribonuclease III [Streptococcus sp. C150]
          Length = 275

 Score =  131 bits (330), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 57/282 (20%), Positives = 101/282 (35%), Gaps = 29/282 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDK-------NFP 46
           + + +WN++S+ A +            +   +   N DII +QETK   K          
Sbjct: 1   MKLISWNIDSLNAALTSDSARAQLSRKVIDTLVAENADIIAIQETKLSAKGPTKKHLQIL 60

Query: 47  FETLQSLN--YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
            +     +  +       +      +    + +  V   P               T+   
Sbjct: 61  EDYFPDYDNTWRSSVEPARKGYAGTMFLYKKELTPVITYPEIGAPSTMDCEGRIITLEFD 120

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
              +  +Y P+         + +I             L+ ++P++  GDYN+  +  D  
Sbjct: 121 NFFVTQVYTPNAGDGLKRLLERQIWD--EKYADYLAELDAQKPVLATGDYNVAHKEIDLA 178

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIR 222
           NP        FT E R  F  L   GFTD  R  + D    Y++W   +  S   N G R
Sbjct: 179 NPSSNRRSPGFTDEERTGFTNLLTKGFTDTYRHLNGDVTGAYTWWAQRSKTSKINNTGWR 238

Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           ID+ + S      +  +  ID+  R      DHTP+++ +D+
Sbjct: 239 IDYWLTSNRIADKVTKSDMIDSGDRQ-----DHTPIVLEIDL 275


>gi|289829520|ref|ZP_06547122.1| exonuclease III [Salmonella enterica subsp. enterica serovar Typhi
           str. E98-3139]
          Length = 228

 Score =  131 bits (330), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 60/227 (26%), Positives = 94/227 (41%), Gaps = 8/227 (3%)

Query: 45  FPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
           FP E +  L Y++   GQK + GVA+L+K  PI +    P D  + Q R I A       
Sbjct: 2   FPLEEVAKLGYNVFYHGQKGHYGVALLTKATPISVRRGFPDDGEEAQRRIIMAEIPSPLG 61

Query: 105 TLRIGNLYLPHGNPITST-KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP--- 160
            + + N Y P G       K+  K  + +    +    L+ + P++  GD NI P     
Sbjct: 62  NITVINGYFPQGESRDHPLKFPAKAQFYQNLQNYLETELKCDNPVLIMGDMNISPTDLDI 121

Query: 161 ---HDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWS 216
               +     +      F  E R+   +L   G  D  R  +      +S++DY +  + 
Sbjct: 122 GIGEENRKRWLRTGKCSFLPEEREWMSRLLKWGLVDTFRQANPQTMDKFSWFDYRSKGFV 181

Query: 217 KNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            N+G+RID ++ S           ID   R   KPSDH PV  +  +
Sbjct: 182 DNRGLRIDLLLASAPLAERCAETGIDYDIRSMEKPSDHAPVWATFRV 228


>gi|312870577|ref|ZP_07730692.1| exodeoxyribonuclease III [Lactobacillus oris PB013-T2-3]
 gi|311093892|gb|EFQ52221.1| exodeoxyribonuclease III [Lactobacillus oris PB013-T2-3]
          Length = 275

 Score =  131 bits (330), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 63/282 (22%), Positives = 103/282 (36%), Gaps = 29/282 (10%)

Query: 4   VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           +   +WN++SI A +            +   I    PD + +QETK        + LQ L
Sbjct: 1   MKFISWNIDSINAALTGTSTRAGETRAVLKKISALEPDAVAIQETKLSKNGPTKKHLQVL 60

Query: 54  -----NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA----TFTINTQ 104
                 Y I                                + A           T+   
Sbjct: 61  ADLFPGYQIAWRSSVEPARKGYAGTMYLYRDQYQPTVTYPQIGAPEPMDSEGRIITLEFH 120

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
              +  +Y P+         D +        R    +L+ ++P+I +GD+N+  +  D  
Sbjct: 121 DFFLTEVYTPNSGNGLKRLADREQWD--DCYRDYLHQLDEQKPVIASGDFNVAHEEIDLA 178

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYA-DSWSKNKGIR 222
           +P    + A FT E R  F +L   GFTD+ R  H      YS+W      S   N G R
Sbjct: 179 HPANNHHSAGFTDEERSHFGQLLAAGFTDSFRFLHPEEAGAYSWWAQRVLTSKQNNSGWR 238

Query: 223 IDHIMLSPEATSLL-HSARIDTKPRGWTKPSDHTPVIVSLDI 263
           ID+ ++S      +  S+ ID+  R      DHTP+++ +D+
Sbjct: 239 IDYWLVSNRLADRVSSSSMIDSGERR-----DHTPIMLEIDL 275


>gi|148984296|ref|ZP_01817591.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP3-BS71]
 gi|225859607|ref|YP_002741117.1| exodeoxyribonuclease III [Streptococcus pneumoniae 70585]
 gi|225861640|ref|YP_002743149.1| exodeoxyribonuclease III [Streptococcus pneumoniae Taiwan19F-14]
 gi|298230311|ref|ZP_06963992.1| exodeoxyribonuclease III [Streptococcus pneumoniae str. Canada
           MDR_19F]
 gi|298254703|ref|ZP_06978289.1| exodeoxyribonuclease III [Streptococcus pneumoniae str. Canada
           MDR_19A]
 gi|298503568|ref|YP_003725508.1| exodeoxyribonuclease III [Streptococcus pneumoniae TCH8431/19A]
 gi|147923585|gb|EDK74698.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP3-BS71]
 gi|225720715|gb|ACO16569.1| exodeoxyribonuclease III [Streptococcus pneumoniae 70585]
 gi|225726783|gb|ACO22634.1| exodeoxyribonuclease III [Streptococcus pneumoniae Taiwan19F-14]
 gi|298239163|gb|ADI70294.1| exodeoxyribonuclease III [Streptococcus pneumoniae TCH8431/19A]
 gi|301800627|emb|CBW33270.1| exodeoxyribonuclease [Streptococcus pneumoniae OXC141]
 gi|327390006|gb|EGE88351.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA04375]
 gi|332074195|gb|EGI84673.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA41301]
          Length = 275

 Score =  131 bits (330), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 64/283 (22%), Positives = 98/283 (34%), Gaps = 31/283 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDK---NFPFETL 50
           + + +WN++S+ A +            +   +   N DII +QETK   K       E L
Sbjct: 1   MKLISWNIDSLNAALTSDSARAKLSQEVLQTLVAENADIIAIQETKLSAKGPTKKHVEIL 60

Query: 51  QSL--NYHIETCGQKS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
           + L   Y       +      Y G   L K +    VT                      
Sbjct: 61  EELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTVTFPEIGAPSTMDLEGRIITLEFD 120

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                       G+ +   +                  L+ E+P++  GDYN+     D 
Sbjct: 121 AFFVTQVYTPNAGDGLKRLEERQVWDVKYAEY---LAELDKEKPVLATGDYNVAHNEIDL 177

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221
            NP        FT E R  F  L   GFTD  R  H D    Y++W   +  S   N G 
Sbjct: 178 ANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHVHGDVPERYTWWAQRSKTSKINNTGW 237

Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           RID+ + S      +  +  ID+  R      DHTP+++ +D+
Sbjct: 238 RIDYWLTSNRIADKVTKSDMIDSGARQ-----DHTPIVLEIDL 275


>gi|172040107|ref|YP_001799821.1| putative exodeoxyribonuclease [Corynebacterium urealyticum DSM
           7109]
 gi|171851411|emb|CAQ04387.1| putative exodeoxyribonuclease [Corynebacterium urealyticum DSM
           7109]
          Length = 344

 Score =  131 bits (330), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 59/340 (17%), Positives = 96/340 (28%), Gaps = 83/340 (24%)

Query: 5   TVATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKNFPFETLQSL--NY 55
           TVAT NVN IRA           +  W+  +  D++ +QE + ++         +L   +
Sbjct: 4   TVATVNVNGIRAAAKVRHENNQGILPWLAAHPADVVLMQEVRADEAQTAKAIAPALEDGW 63

Query: 56  HIE--TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL-- 111
           H+       K   GVAILS+    ++      +         EA    +     I     
Sbjct: 64  HLAQAPAAAKGRAGVAILSRLPLQDVQIGFGHEANPEYPGAEEAAREFDGSGRYIEATVD 123

Query: 112 ------------------YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGD 153
                                 G      K+    ++     + A+      + ++  GD
Sbjct: 124 AEVGGSTQPITVASLYLPSGASGTEKQDEKFRFLDAFAPFMHQRAAAAEAGGQQMLIGGD 183

Query: 154 YNIIPQPHDCYNPIIWENDACFTLEVRQSFQK---------------------------- 185
           +NI  +  D  N     N + F    R                                 
Sbjct: 184 WNICHRRADLKNWKPNRNKSGFLPAERAFLDHVLGTYPDGATQVGDAEDSGRAGNPAGAA 243

Query: 186 ------------------------LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI 221
                                    Q            D    YS+W Y   ++  N G 
Sbjct: 244 EDFFGAVDYQPGELAQARIAAGAATQPGWHDAVRHLHPDEDGPYSWWSYRGKAFDTNAGW 303

Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           RID   ++         AR+D  P    + SDH+PVI+  
Sbjct: 304 RIDLHAVTGGLLEHTTVARVDKAPTYDQRWSDHSPVILEF 343


>gi|288560371|ref|YP_003423857.1| exodeoxyribonuclease III Xth1 [Methanobrevibacter ruminantium M1]
 gi|288543081|gb|ADC46965.1| exodeoxyribonuclease III Xth1 [Methanobrevibacter ruminantium M1]
          Length = 246

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 62/265 (23%), Positives = 103/265 (38%), Gaps = 21/265 (7%)

Query: 1   MSVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           MS + + +WNVN IR RI N  +   +++  PDII  QETK   +    + L    Y   
Sbjct: 1   MSNLKIISWNVNGIRTRIKNKDINPVLEKE-PDIILFQETKASYEQMDKKFLNKNPYDYY 59

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
               +S     + S      IV  +                 ++ +   + ++Y P G  
Sbjct: 60  FLKGESARTGGLAS---FTNIVPKIIKRFFIKSQDAFHRACVLDFEDFTLIHIYAPAGTG 116

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
             +   +                   ++ LI AGD+NI     D  N         FT E
Sbjct: 117 KKA---NFNQKLDYFNSLLKYVEKNKDKNLIIAGDFNIAHNDIDISNKDT---KVSFTDE 170

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
            R    KL++ GF DA+R  ++    +S+W     +  +N G R+D+  +S      + S
Sbjct: 171 ERSVLDKLESFGFVDALRLFNE-EESFSYW----KNKEENDGARLDYFFVSESLKDKVKS 225

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263
           + I     G    S H P+ + ++I
Sbjct: 226 SSILVDVEG----SKHLPIELEIEI 246


>gi|229823722|ref|ZP_04449791.1| hypothetical protein GCWU000282_01024 [Catonella morbi ATCC 51271]
 gi|229786761|gb|EEP22875.1| hypothetical protein GCWU000282_01024 [Catonella morbi ATCC 51271]
          Length = 275

 Score =  131 bits (330), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 56/280 (20%), Positives = 105/280 (37%), Gaps = 25/280 (8%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTED-------KNFP 46
           + + +WN++S+ A +            +   + +   DII +QETK          +   
Sbjct: 1   MKLISWNIDSLNAALTSDSARAQLSKAVLDQLAQAGADIIAIQETKLSPTGPTKKHEEIL 60

Query: 47  FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
            E      +   +  + +  G A         +   +   ++   +        I  +  
Sbjct: 61  AEYFPGYAHTWRSSQEPARKGYAGTLFLYREHLQPKVTFPEIGAPSTMDLEGRIITLEFD 120

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
                 +   N     K   +              L+ ++P++  GD+N+  Q  D  NP
Sbjct: 121 DCYVTQVYTPNAGDGLKRLAERQVWDAKYADYLVSLDAKKPVLATGDFNVAHQEIDLANP 180

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIRID 224
                 A FT E R  F  L + GFTD+ R  H D  H Y++W   +  S   N G RID
Sbjct: 181 GANRQSAGFTDEERAGFTHLLSRGFTDSFRHLHGDVPHQYTWWAQRSRTSKINNTGWRID 240

Query: 225 HIMLSPEATSLLHSARI-DTKPRGWTKPSDHTPVIVSLDI 263
           + ++S      +  + + D+  R      DHTP+++ +++
Sbjct: 241 YWLVSDRIADKVTKSEMLDSGARQ-----DHTPILLEINL 275


>gi|196233332|ref|ZP_03132177.1| exodeoxyribonuclease III Xth [Chthoniobacter flavus Ellin428]
 gi|196222637|gb|EDY17162.1| exodeoxyribonuclease III Xth [Chthoniobacter flavus Ellin428]
          Length = 216

 Score =  131 bits (329), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 58/221 (26%), Positives = 93/221 (42%), Gaps = 8/221 (3%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPF-ETLQSLNYHIETCG 61
           + + +WNVN IRA +      +I+  NPDI+ LQETK   ++    + L           
Sbjct: 1   MKLISWNVNGIRAVLKKGFTDFIESENPDILALQETKATPEDVVVPQALAEYTSFWNIAE 60

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G AI +K +PI +   +   + D + R I A +        +          +T 
Sbjct: 61  KKGYSGTAIFTKTKPIAVTLGIGVAEHDREGRVITAEYA---DFFLVNVYVPNSKRELTR 117

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
             Y  +     R      ++LEL++P+I+ GD N+     D   P     +  FT E R 
Sbjct: 118 LAYRQQW---DRDFLAYLKKLELKKPVIWCGDLNVAHTEIDLARPKDNVKNHGFTPEERA 174

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR 222
            F      GF DA R        Y++W     + ++N G R
Sbjct: 175 GFDAFVGAGFVDAFREFEKAGGHYTWWSQMGTARARNIGWR 215


>gi|296876863|ref|ZP_06900911.1| exodeoxyribonuclease III [Streptococcus parasanguinis ATCC 15912]
 gi|296432365|gb|EFH18164.1| exodeoxyribonuclease III [Streptococcus parasanguinis ATCC 15912]
          Length = 282

 Score =  131 bits (329), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 61/285 (21%), Positives = 102/285 (35%), Gaps = 31/285 (10%)

Query: 2   SVVTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51
           + + + +WN++S+ A +            +   +   + DII +QETK   K    + L+
Sbjct: 6   NTMKLISWNIDSLNAALTSDSARAKLSQEVLQTLVAEDADIIAIQETKLSAKGPTKKHLE 65

Query: 52  SL-----NYHIETCGQKS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI 101
            L      Y       +      Y G   L K +   +VT                    
Sbjct: 66  ILEELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPVVTFPEIGAPSTMDLEGRIITLE 125

Query: 102 NTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161
                         G+ +   +                  L+ ++P++  GDYN+  +  
Sbjct: 126 FDHFFVTQVYTPNAGDGLKRLEERQVWDVKYAKY---LAELDKQKPVLATGDYNVAHKEI 182

Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNK 219
           D  NP        FT E R+ F  L   GFTD  R  H D    Y++W   +  S   N 
Sbjct: 183 DLANPASNRRSPGFTDEEREGFTNLLAKGFTDTFRHLHGDVPERYTWWAQRSKTSKINNT 242

Query: 220 GIRIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           G RID+ + S   T  +  +  ID+  R      DHTP+++ + +
Sbjct: 243 GWRIDYWLTSNRVTDKITKSDMIDSGARQ-----DHTPIVLEIKL 282


>gi|227889124|ref|ZP_04006929.1| exodeoxyribonuclease III [Lactobacillus johnsonii ATCC 33200]
 gi|227850353|gb|EEJ60439.1| exodeoxyribonuclease III [Lactobacillus johnsonii ATCC 33200]
          Length = 275

 Score =  131 bits (329), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 65/282 (23%), Positives = 113/282 (40%), Gaps = 29/282 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTED-------KNFP 46
           + + +WN++S+ A +           ++   IKE + DII +QETK          +   
Sbjct: 1   MRLISWNIDSLNAALTSDSPRAQLTRSVLNTIKEKDADIIAIQETKLRSTGPTKKHQEVL 60

Query: 47  FETLQSLNYHIETCGQKSY--NGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
            E   + +Y   +  + +       +      +      P         +     T+   
Sbjct: 61  AEIFPNYDYVWRSSEEPARKGYAGTMFLYKNTLTPEVTKPAIGAPDTMDYEGRILTLEFD 120

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
              +  +Y P+         D +I           Q+L+  +P+I +GDYN+   P D  
Sbjct: 121 NYYVTQVYTPNSGNELKRLKDRQIWD--EKYTEYLQKLDKSKPVIASGDYNVAHTPIDLK 178

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYY-ADSWSKNKGIR 222
           +P    ++A FT E RQ F KL  +GFTD  R  H     +YS+W      S   N G R
Sbjct: 179 HPENNHHNAGFTDEERQGFDKLLKLGFTDTFRKVHGNVEGVYSWWAQRVRTSKDNNSGWR 238

Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           ID+ ++S      +  +  IDT  R      DH P+++ +++
Sbjct: 239 IDYYIVSDRIADQVTKSEMIDTGDRK-----DHCPIMLEINL 275


>gi|225869051|ref|YP_002744999.1| exodeoxyribonuclease [Streptococcus equi subsp. zooepidemicus]
 gi|225702327|emb|CAX00133.1| exodeoxyribonuclease [Streptococcus equi subsp. zooepidemicus]
          Length = 275

 Score =  131 bits (329), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 63/283 (22%), Positives = 103/283 (36%), Gaps = 31/283 (10%)

Query: 4   VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + + +WN++S+ A +            +   +   + DII +QETK   K    + L+SL
Sbjct: 1   MKLISWNIDSLNAALTGESPRALLSRAVLDSLVAQDADIIAIQETKLSAKGPTKKHLESL 60

Query: 54  -NYHIETCGQKSYN---------GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
             Y          +         G   L K +   IVT                      
Sbjct: 61  LGYFPNHLNVWRSSVEPARKGYAGTMFLYKKELNPIVTFPDIGAPTTMDAEGRIITLEFD 120

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                       G+ +   +                 +L+ ++P++  GDYN+  +  D 
Sbjct: 121 DFFVTQVYTPNAGDGLRRLEERQLWDQKYADY---LAQLDAQKPVLATGDYNVAHKEIDL 177

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221
            NP        FT E R  F  L N GFTD  R  H D  ++YS+W   +  S   N G 
Sbjct: 178 ANPASNHRSPGFTDEERLGFTNLLNRGFTDTFRFIHGDIPNVYSWWAQRSKTSKLNNTGW 237

Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           RID+ + S      +  +  I +  R      DHTP+++ +D+
Sbjct: 238 RIDYWLTSNRLIDKVSRSEMISSGERQ-----DHTPILLEIDL 275


>gi|228476989|ref|ZP_04061627.1| exodeoxyribonuclease III [Streptococcus salivarius SK126]
 gi|228251008|gb|EEK10179.1| exodeoxyribonuclease III [Streptococcus salivarius SK126]
          Length = 275

 Score =  131 bits (329), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 57/282 (20%), Positives = 101/282 (35%), Gaps = 29/282 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDK-------NFP 46
           + + +WN++S+ A +            +   +   N DII +QETK   K          
Sbjct: 1   MKLISWNIDSLNAALTSDSARAQLSRAVIDTLVAENADIIAIQETKLSAKGPTKKHLQIL 60

Query: 47  FETLQSLN--YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
            +     +  +       +      +    + +  V   P               T+   
Sbjct: 61  EDYFPDYDNTWRSSVEPARKGYAGTMFLYKKELNPVITYPEIGAPSTMDCEGRIITLEFD 120

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
              +  +Y P+         + +I             L+ ++P++  GDYN+  +  D  
Sbjct: 121 NFFVTQVYTPNAGDGLKRLLERQIWD--EKYADYLAELDAQKPVLATGDYNVAHKEIDLA 178

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIR 222
           NP        FT E R  F  L   GFTD  R  + D    Y++W   +  S   N G R
Sbjct: 179 NPSSNRRSPGFTDEERAGFTNLLAKGFTDTYRHLNGDVTGAYTWWAQRSKTSKINNTGWR 238

Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           ID+ + S      +  +  ID+  R      DHTP+++ +D+
Sbjct: 239 IDYWLTSNRIADKVTKSDMIDSGDRQ-----DHTPIVLEIDL 275


>gi|42518122|ref|NP_964052.1| exodeoxyribonuclease [Lactobacillus johnsonii NCC 533]
 gi|41582406|gb|AAS08018.1| exodeoxyribonuclease [Lactobacillus johnsonii NCC 533]
 gi|329666434|gb|AEB92382.1| exodeoxyribonuclease III [Lactobacillus johnsonii DPC 6026]
          Length = 275

 Score =  131 bits (329), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 65/282 (23%), Positives = 113/282 (40%), Gaps = 29/282 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTED-------KNFP 46
           + + +WN++S+ A +           ++   IKE + DII +QETK          +   
Sbjct: 1   MRLISWNIDSLNAALTSDSPRAQLTRSVLNTIKEKDADIIAIQETKLRSTGPTKKHQEVL 60

Query: 47  FETLQSLNYHIETCGQKSY--NGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
            E   + +Y   +  + +       +      +      P         +     T+   
Sbjct: 61  AEMFPNYDYVWRSSEEPARKGYAGTMFLYKNTLTPEVTKPTIGAPDTMDYEGRILTLEFD 120

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
              +  +Y P+         D +I           Q+L+  +P+I +GDYN+   P D  
Sbjct: 121 NYYVTQVYTPNSGNELKRLEDRQIWD--EKYTEYLQKLDKSKPVIASGDYNVAHTPIDLK 178

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYY-ADSWSKNKGIR 222
           +P    ++A FT E RQ F KL  +GFTD  R  H     +YS+W      S   N G R
Sbjct: 179 HPENNHHNAGFTDEERQGFDKLLKLGFTDTFRKVHGNVEGVYSWWAQRVRTSKDNNSGWR 238

Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           ID+ ++S      +  +  IDT  R      DH P+++ +++
Sbjct: 239 IDYYIVSDRIADQVTKSEMIDTGDRK-----DHCPIMLEINL 275


>gi|94987973|ref|YP_596074.1| exodeoxyribonuclease III [Streptococcus pyogenes MGAS9429]
 gi|94991856|ref|YP_599955.1| exodeoxyribonuclease III [Streptococcus pyogenes MGAS2096]
 gi|94541481|gb|ABF31530.1| exodeoxyribonuclease III [Streptococcus pyogenes MGAS9429]
 gi|94545364|gb|ABF35411.1| Exodeoxyribonuclease III [Streptococcus pyogenes MGAS2096]
          Length = 303

 Score =  131 bits (329), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 59/283 (20%), Positives = 101/283 (35%), Gaps = 31/283 (10%)

Query: 4   VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + + +WN++S+ A +            +   +   + DII +QETK   K    + +++L
Sbjct: 29  MKLISWNIDSLNAALTGESPRALLSRAVLDTLVAQDADIIAIQETKLSAKGPTKKHIETL 88

Query: 54  -NYHIETCGQKSYN---------GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
            +Y          +         G   L K     ++T                      
Sbjct: 89  LSYFPNYLHVWRSSVEPARKGYAGTMFLYKNTLNPVITFPEIGAPTTMDAEGRIITLEFE 148

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                       G+ +                      L+ ++P++  GDYN+  +  D 
Sbjct: 149 DFFVTQVYTPNAGDGLRRLDDRQIWDHKYADY---LTELDAQKPVLATGDYNVAHKEIDL 205

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221
            NP        FT E RQ F  L   GFTD  R  H D  H+Y++W   +  S   N G 
Sbjct: 206 ANPSSNRRSPGFTDEERQGFTNLLARGFTDTFRHLHGDIPHVYTWWAQRSKTSKINNTGW 265

Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           RID+ + S      +  +  I +  R      DHTP+++ +D+
Sbjct: 266 RIDYWLASNRLVDKVKRSEMISSGERQ-----DHTPILLDIDL 303


>gi|322386046|ref|ZP_08059685.1| exodeoxyribonuclease [Streptococcus cristatus ATCC 51100]
 gi|321269890|gb|EFX52811.1| exodeoxyribonuclease [Streptococcus cristatus ATCC 51100]
          Length = 275

 Score =  131 bits (329), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 62/283 (21%), Positives = 101/283 (35%), Gaps = 31/283 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + + +WN++S+ A +            +   ++  N DII +QETK   K    + L+ L
Sbjct: 1   MKLISWNIDSLNAALTSDSARAQLSQAVLRTLQAENADIIAIQETKLSAKGPTKKHLEIL 60

Query: 54  -----NYHIETCGQKS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
                 Y       +      Y G   L K +   IVT                      
Sbjct: 61  EELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPIVTFPEIGAPSTMDVEGRIITLEFD 120

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                       G+ +                      L+ ++P++  GDYN+  +  D 
Sbjct: 121 DFFVTQVYTPNAGDGLKRLDERQVWDVKYAEY---LASLDEQKPVLATGDYNVAHKEIDL 177

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221
            NP        FT E R  F  L   GFTD  R  H D  + Y++W   +  S   N G 
Sbjct: 178 ANPASNRRSPGFTDEERAGFTNLLAKGFTDTFRHLHGDIPNQYTWWAQRSKTSKINNTGW 237

Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           RID+ + S      +  +  ID+  R      DHTP+++ +++
Sbjct: 238 RIDYWLTSNRVADKVTKSDMIDSGARQ-----DHTPIVMEIEL 275


>gi|149024967|ref|ZP_01836347.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP23-BS72]
 gi|168494239|ref|ZP_02718382.1| exodeoxyribonuclease III [Streptococcus pneumoniae CDC3059-06]
 gi|147929460|gb|EDK80455.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP23-BS72]
 gi|183575787|gb|EDT96315.1| exodeoxyribonuclease III [Streptococcus pneumoniae CDC3059-06]
          Length = 275

 Score =  131 bits (329), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 58/282 (20%), Positives = 99/282 (35%), Gaps = 29/282 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDK-------NFP 46
           + + +WN++S+ A +            +   +   N DII +QETK   K          
Sbjct: 1   MKLISWNIDSLNAALTSDSARAKLSQEVLQTLVAENADIIAIQETKLSAKGPTKKHVEIL 60

Query: 47  FETLQSLN--YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
            E        +       +      +    + +      P               T+   
Sbjct: 61  EELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAPSTMDLEGRIITLEFD 120

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
              +  +Y P+         + ++            +L+ E+P++  GDYN+     D  
Sbjct: 121 AFFVTQVYTPNAGDGLKRLEERQVWD--AKYAEYLAKLDKEKPVLATGDYNVAHNEIDLA 178

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIR 222
           NP        FT E R  F  L   GFTD  R  H D    Y++W   +  S   N G R
Sbjct: 179 NPASNRRSPGFTDEERAGFTNLLATGFTDTFRHVHGDVPERYTWWAQRSKTSKINNTGWR 238

Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           ID+ + S      +  +  ID+  R      DHTP+++ +D+
Sbjct: 239 IDYWLTSNRIADKVTKSDMIDSGARQ-----DHTPIVLEIDL 275


>gi|297205315|ref|ZP_06922711.1| exodeoxyribonuclease III [Lactobacillus jensenii JV-V16]
 gi|297149893|gb|EFH30190.1| exodeoxyribonuclease III [Lactobacillus jensenii JV-V16]
          Length = 299

 Score =  131 bits (329), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 64/286 (22%), Positives = 110/286 (38%), Gaps = 32/286 (11%)

Query: 1   MSVVTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTED-------K 43
            S++ + +WN++S+ A +           ++   I E  PDI+ +QETK           
Sbjct: 23  FSML-LISWNIDSLNAALTSDSARAQKTRHVLTQIAEKKPDILAIQETKLRATGPTKKHA 81

Query: 44  NFPFETLQSLNYHI---ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT 100
               +      Y     E   +K Y G   L K     +VT+      D           
Sbjct: 82  EILAKLFPDYEYVWRSSEEPARKGYAGTMYLYKNTLEPVVTYPTIGAPDTMDFEGRIITL 141

Query: 101 INTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP 160
              +           G  +             +      Q+L+ E+P++ +GDYN+  + 
Sbjct: 142 EFPEYFVTQVYTPNAGGELKRLG---DRQGWDKKYIEYLQKLDKEKPVLASGDYNVAHEE 198

Query: 161 HDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYAD-SWSKN 218
            D  +P    + A FT E R  F +L + GFTD+ R  H     +YS+W      + + N
Sbjct: 199 IDLKHPENNHHSAGFTDEERADFTELLSTGFTDSFRKIHGNIPEVYSWWAQRIKTAKANN 258

Query: 219 KGIRIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
            G RID+ + S      +  +  +DT  R      DH P+++ +D+
Sbjct: 259 SGWRIDYWLTSNRIADKIKKSEMMDTGERA-----DHCPIVLEIDL 299


>gi|15901674|ref|NP_346278.1| exodeoxyribonuclease [Streptococcus pneumoniae TIGR4]
 gi|15903702|ref|NP_359252.1| exodeoxyribonuclease [Streptococcus pneumoniae R6]
 gi|111658189|ref|ZP_01408884.1| hypothetical protein SpneT_02000620 [Streptococcus pneumoniae
           TIGR4]
 gi|116516049|ref|YP_817078.1| exodeoxyribonuclease III [Streptococcus pneumoniae D39]
 gi|149004304|ref|ZP_01829075.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP14-BS69]
 gi|168483377|ref|ZP_02708329.1| exodeoxyribonuclease III [Streptococcus pneumoniae CDC1873-00]
 gi|194397999|ref|YP_002038432.1| exodeoxyribonuclease III [Streptococcus pneumoniae G54]
 gi|237649626|ref|ZP_04523878.1| exodeoxyribonuclease III [Streptococcus pneumoniae CCRI 1974]
 gi|237822093|ref|ZP_04597938.1| exodeoxyribonuclease III [Streptococcus pneumoniae CCRI 1974M2]
 gi|303258792|ref|ZP_07344772.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP-BS293]
 gi|303261955|ref|ZP_07347901.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP14-BS292]
 gi|303263817|ref|ZP_07349739.1| exodeoxyribonuclease III [Streptococcus pneumoniae BS397]
 gi|303265648|ref|ZP_07351547.1| exodeoxyribonuclease III [Streptococcus pneumoniae BS457]
 gi|303268757|ref|ZP_07354546.1| exodeoxyribonuclease III [Streptococcus pneumoniae BS458]
 gi|61223736|sp|P0A2X3|EXOA_STRPN RecName: Full=Exodeoxyribonuclease
 gi|61223737|sp|P0A2X4|EXOA_STRR6 RecName: Full=Exodeoxyribonuclease
 gi|153627|gb|AAA26879.1| exodeoxyribonuclease [Streptococcus pneumoniae]
 gi|14973347|gb|AAK75918.1| exodeoxyribonuclease [Streptococcus pneumoniae TIGR4]
 gi|15459332|gb|AAL00463.1| Exodeoxyribonuclease [Streptococcus pneumoniae R6]
 gi|116076625|gb|ABJ54345.1| exodeoxyribonuclease III [Streptococcus pneumoniae D39]
 gi|147757737|gb|EDK64752.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP14-BS69]
 gi|172043234|gb|EDT51280.1| exodeoxyribonuclease III [Streptococcus pneumoniae CDC1873-00]
 gi|194357666|gb|ACF56114.1| exodeoxyribonuclease III [Streptococcus pneumoniae G54]
 gi|302637038|gb|EFL67527.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP14-BS292]
 gi|302640293|gb|EFL70748.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP-BS293]
 gi|302641713|gb|EFL72071.1| exodeoxyribonuclease III [Streptococcus pneumoniae BS458]
 gi|302644775|gb|EFL75023.1| exodeoxyribonuclease III [Streptococcus pneumoniae BS457]
 gi|302646855|gb|EFL77080.1| exodeoxyribonuclease III [Streptococcus pneumoniae BS397]
          Length = 275

 Score =  131 bits (329), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 58/282 (20%), Positives = 98/282 (34%), Gaps = 29/282 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDK-------NFP 46
           + + +WN++S+ A +            +   +   N DII +QETK   K          
Sbjct: 1   MKLISWNIDSLNAALTSDSARAKLSQEVLQTLVAENADIIAIQETKLSAKGPTKKHVEIL 60

Query: 47  FETLQSLN--YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
            E        +       +      +    + +      P               T+   
Sbjct: 61  EELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAPSTMDLEGRIITLEFD 120

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
              +  +Y P+         + ++             L+ E+P++  GDYN+     D  
Sbjct: 121 AFFVTQVYTPNAGDGLKRLEERQVWD--AKYAEYLAELDKEKPVLATGDYNVAHNEIDLA 178

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIR 222
           NP        FT E R  F  L   GFTD  R  H D    Y++W   +  S   N G R
Sbjct: 179 NPASNRRSPGFTDEERAGFTNLLATGFTDTFRHVHGDVPERYTWWAQRSKTSKINNTGWR 238

Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           ID+ + S      +  +  ID+  R      DHTP+++ +D+
Sbjct: 239 IDYWLTSNRIADKVTKSDMIDSGARQ-----DHTPIVLEIDL 275


>gi|94989847|ref|YP_597947.1| exodeoxyribonuclease III [Streptococcus pyogenes MGAS10270]
 gi|94543355|gb|ABF33403.1| Exodeoxyribonuclease III [Streptococcus pyogenes MGAS10270]
          Length = 303

 Score =  131 bits (328), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 59/283 (20%), Positives = 100/283 (35%), Gaps = 31/283 (10%)

Query: 4   VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + + +WN++S+ A +            +   +   + DII +QETK   K    + +++L
Sbjct: 29  MKLISWNIDSLNAALTGESPRALLSRAVLDTLVAQDADIIAIQETKLSAKGPTKKHIETL 88

Query: 54  -NYHIETCGQKSYN---------GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
            +Y          +         G   L K     ++T                      
Sbjct: 89  LSYFPNYLHVWRSSVEPARKGYAGTMFLYKNTLNPVITFPEIGAPTTMDAEGRIITLEFE 148

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                       G+ +                      L+ ++P++  GDYN+  +  D 
Sbjct: 149 DFFVTQVYTPNAGDGLRRLDDRQIWDHKYADY---LTELDAQKPVLATGDYNVAHKEIDL 205

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221
            NP        FT E RQ F  L   GFTD  R  H D  H+Y++W   +  S   N G 
Sbjct: 206 ANPSSNRRSPGFTDEERQGFTNLLARGFTDTFRHLHGDIPHVYTWWAQRSKTSKINNTGW 265

Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           RID+ + S      +  +  I +  R      DHTP+ + +D+
Sbjct: 266 RIDYWLASNRLVDKVKRSEMISSGERQ-----DHTPIFLDIDL 303


>gi|241895249|ref|ZP_04782545.1| exodeoxyribonuclease III [Weissella paramesenteroides ATCC 33313]
 gi|241871555|gb|EER75306.1| exodeoxyribonuclease III [Weissella paramesenteroides ATCC 33313]
          Length = 289

 Score =  131 bits (328), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 64/278 (23%), Positives = 107/278 (38%), Gaps = 30/278 (10%)

Query: 4   VTVATWNVNSIRARIH-----NLAAW-----IKENNPDIICLQETKT--------EDKNF 45
           +   +WN++SI A +       +  W     I    PD++ +QETK         ++   
Sbjct: 14  MKFISWNIDSINAAVEHKSVRGVMTWEVLQQIALEKPDVLAIQETKLKATGLTKKQETAL 73

Query: 46  PFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT 105
                    Y   + G+  Y+G  +L++++PI +     G   ++       T       
Sbjct: 74  DELFPNYYRYLRMSTGRSGYSGTMMLTRHEPISVTMPEIGAPGEMDIEGRIITLEFENNY 133

Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165
           +                   +         R   Q L+  +P+IF+GD+N+  Q  D  N
Sbjct: 134 VSTVYTPNSGSGLARL----EDRQAWDDAYRAYVQTLDATKPVIFSGDFNVAHQEIDLKN 189

Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYAD-SWSKNKGIRI 223
           P      A FT E R+ F +L + GFTD  R  H     +Y++W   +  S   N G RI
Sbjct: 190 PKSNHKKAGFTNEEREHFSQLLDAGFTDIFRYLHPDQAGVYTWWAQISKTSKINNSGWRI 249

Query: 224 DHIMLSPEATSLLHS-ARIDTKPRGWTKPSDHTPVIVS 260
           D+ + S      +   + IDT  R      DH P+ + 
Sbjct: 250 DYYLTSNRLADQVSELSVIDTGARQ-----DHAPIKLE 282


>gi|19745558|ref|NP_606694.1| putative 3'-exo-deoxyribonuclease [Streptococcus pyogenes MGAS8232]
 gi|19747679|gb|AAL97193.1| putative 3'-exo-deoxyribonuclease [Streptococcus pyogenes MGAS8232]
          Length = 275

 Score =  131 bits (328), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 61/283 (21%), Positives = 102/283 (36%), Gaps = 31/283 (10%)

Query: 4   VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + + +WN++S+ A +            +   +   + DII +QETK   K    + +++L
Sbjct: 1   MKLISWNIDSLNAALTGESPRALLSRAVLDTLVAQDADIIAIQETKLSAKGPTKKHIEAL 60

Query: 54  -NYHIETCGQKSYN---------GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
            +Y          +         G   L K     + T                      
Sbjct: 61  LSYFPNYLHVWRSSVEPARKGYAGTMFLYKNTLNPVSTFPEIGAPTTMDAEGRIITLEFE 120

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                       G+ +                      L+ ++P++ AGDYN+  +  D 
Sbjct: 121 DFFVTQVYTPNAGDGLRRLDDRQIWDHKYADY---LTELDAQKPVLAAGDYNVAHKEIDL 177

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221
            NP        FT E RQSF  L   GFTD  R  H D  H+Y++W   +  S   N G 
Sbjct: 178 ANPSSNRRSPGFTDEERQSFTNLLARGFTDTFRHLHGDIPHVYTWWAQRSKTSKINNTGW 237

Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           RID+ + S      +  +  I +  R      DHTP+++ +D+
Sbjct: 238 RIDYWLASNRLVDKVKRSEMISSGERQ-----DHTPILLDIDL 275


>gi|294790372|ref|ZP_06755530.1| exodeoxyribonuclease III [Scardovia inopinata F0304]
 gi|294458269|gb|EFG26622.1| exodeoxyribonuclease III [Scardovia inopinata F0304]
          Length = 276

 Score =  131 bits (328), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 70/281 (24%), Positives = 111/281 (39%), Gaps = 30/281 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           +   +WN++S+ A +            + A I+  NP++I +QETK        + L +L
Sbjct: 1   MKFVSWNIDSLNAALLGKSDRSVQSRQVLASIRGENPEVIAIQETKLPATGPSKKHLTAL 60

Query: 54  -----NYHIETCG-----QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
                +Y +         +K Y G   LSK     +    P               T+  
Sbjct: 61  SQFFDDYDVHWRSSVEPARKGYAGTMCLSKKGLPLVAVTEPRIHSPEPMDCEGRLQTLEF 120

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
               + N+Y P+         D +        R     L+  +P++  GD+N+  Q  D 
Sbjct: 121 PDFYLVNVYTPNSGDGLRRLSDRQ--LWDDAYRAYLTELDEAKPILACGDFNVAHQEIDL 178

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYA-DSWSKNKGI 221
            +P    + A FT E RQ F  L   GFTD  R  H      Y++W   A  S + N G 
Sbjct: 179 AHPASNHHSAGFTDEERQKFTALLGAGFTDTYRYLHPNQAGAYTWWAQRAVTSKANNSGW 238

Query: 222 RIDHIMLSPEATSLLH-SARIDTKPRGWTKPSDHTPVIVSL 261
           RID+ ++S    S +  S  IDT  R      DH P+++ +
Sbjct: 239 RIDYWLVSNRLNSRVKQSTMIDTGDRR-----DHAPILLDI 274


>gi|148989637|ref|ZP_01820969.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP6-BS73]
 gi|147924954|gb|EDK76036.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP6-BS73]
          Length = 275

 Score =  131 bits (328), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 62/283 (21%), Positives = 98/283 (34%), Gaps = 31/283 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDK---NFPFETL 50
           + + +WN++S+ A +            +   +   N DII +QETK   K       E L
Sbjct: 1   MKLISWNIDSLNAALTSDSARAKLSQEVLQTLVAENADIIAIQETKLSAKGPTKKHVEIL 60

Query: 51  QSL--NYHIETCGQKS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
           + L   Y       +      Y G   L K +    ++                      
Sbjct: 61  EELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAPSTMDLEGRIITLEFD 120

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                       G+ +   +                  L+ E+P++  GDYN+     D 
Sbjct: 121 AFFVTQVYTPNAGDGLKRLEERQVWDTKYAEY---LAELDKEKPVLATGDYNVAHNEIDL 177

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221
            NP        FT E R  F  L   GFTD  R  H D    Y++W   +  S   N G 
Sbjct: 178 ANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHVHGDVPERYTWWAQRSKTSKINNTGW 237

Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           RID+ + S      +  +  ID+  R      DHTP+++ +D+
Sbjct: 238 RIDYWLTSNRIADKVTKSDMIDSGARQ-----DHTPIVLEIDL 275


>gi|295691916|ref|YP_003600526.1| exodeoxyribonuclease iii [Lactobacillus crispatus ST1]
 gi|295030022|emb|CBL49501.1| Exodeoxyribonuclease III [Lactobacillus crispatus ST1]
          Length = 275

 Score =  131 bits (328), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 61/280 (21%), Positives = 109/280 (38%), Gaps = 25/280 (8%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTED-------KNFP 46
           + + +WN++S+ A +            +   I + NPDII +QETK          K   
Sbjct: 1   MILISWNIDSLNAALTGTSARAEETRQVLTKIHDANPDIIAIQETKLRATGPTKKHKEVL 60

Query: 47  FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
            E     +Y   +  + +  G A         +   +    +            I  +  
Sbjct: 61  AEKFPEYDYVWRSSEEPARKGYAGTMYLYKKGLTPAVSEPIIGAPEPMDHEGRIITLEFD 120

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
           +     +   N  +  K   +     +      Q+L+ ++P++ +GDYN      D  +P
Sbjct: 121 KYFVTQVYTPNSGSGLKRLAERQVWDQKYIEYLQKLDEKKPVLASGDYNCAHTEIDLKHP 180

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYY-ADSWSKNKGIRID 224
               + A FT E R  F  L N GFTD  R  H +   +YS+W      + + N G RID
Sbjct: 181 ENNHHSAGFTDEERVDFTNLLNAGFTDTFRKVHGEITDVYSWWAQRVRTAKANNSGWRID 240

Query: 225 HIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           + ++S      +  +  IDT  R      DH P+++ +++
Sbjct: 241 YWLVSNRIADKVVRSEMIDTGKRA-----DHCPILLEINL 275


>gi|299753114|ref|XP_001833071.2| DNA-(apurinic or apyrimidinic site) lyase [Coprinopsis cinerea
           okayama7#130]
 gi|298410149|gb|EAU88760.2| DNA-(apurinic or apyrimidinic site) lyase [Coprinopsis cinerea
           okayama7#130]
          Length = 304

 Score =  131 bits (328), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 53/264 (20%), Positives = 97/264 (36%), Gaps = 37/264 (14%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETL---QSLNYHIE 58
            + +ATWNV  + A +      +++  + DI+ L ETK  D   P +     +  + +  
Sbjct: 71  TLRIATWNVCGLAASMRKGFKYYVEAEDADILVLTETKVND--IPADPALKSRYPHQYWS 128

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
              +K+Y G AILSK +P+ +   LPG                                 
Sbjct: 129 ISDKKTYAGTAILSKVKPLHVDYKLPGHPNPK--------------------------GR 162

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
           I + ++++        +    +   ++    +   +    +  D   P+IW  D      
Sbjct: 163 ILTLEFENAYLIGTYVVNAGQELKTMDAKKEWQTHFEAYIRELDKKKPVIWTGDLNVAP- 221

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
             +     +   F D  R  H     Y++W Y   S  K  G R+D  +LS +    +  
Sbjct: 222 -TEKEDDPERPQFVDVWRKLHPDLQHYTYWSYRFQSREKGNGWRLDMFVLSTKLVDRVKK 280

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
             I  +  G    SDH P+I+ ++
Sbjct: 281 CEIRDEIYG---ASDHVPLIMDIE 301


>gi|148993303|ref|ZP_01822843.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP9-BS68]
 gi|148998707|ref|ZP_01826145.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP11-BS70]
 gi|149006502|ref|ZP_01830201.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP18-BS74]
 gi|168487344|ref|ZP_02711852.1| exodeoxyribonuclease III [Streptococcus pneumoniae CDC1087-00]
 gi|168489877|ref|ZP_02714076.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP195]
 gi|168491840|ref|ZP_02715983.1| exodeoxyribonuclease III [Streptococcus pneumoniae CDC0288-04]
 gi|168574966|ref|ZP_02720929.1| exodeoxyribonuclease III [Streptococcus pneumoniae MLV-016]
 gi|182684788|ref|YP_001836535.1| exodeoxyribonuclease [Streptococcus pneumoniae CGSP14]
 gi|221232582|ref|YP_002511736.1| exodeoxyribonuclease [Streptococcus pneumoniae ATCC 700669]
 gi|225855280|ref|YP_002736792.1| exodeoxyribonuclease III [Streptococcus pneumoniae JJA]
 gi|303254644|ref|ZP_07340746.1| exodeoxyribonuclease [Streptococcus pneumoniae BS455]
 gi|307068457|ref|YP_003877423.1| exonuclease III [Streptococcus pneumoniae AP200]
 gi|307128039|ref|YP_003880070.1| exodeoxyribonuclease III [Streptococcus pneumoniae 670-6B]
 gi|147755401|gb|EDK62450.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP11-BS70]
 gi|147761800|gb|EDK68763.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP18-BS74]
 gi|147928070|gb|EDK79089.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP9-BS68]
 gi|182630122|gb|ACB91070.1| exodeoxyribonuclease [Streptococcus pneumoniae CGSP14]
 gi|183569805|gb|EDT90333.1| exodeoxyribonuclease III [Streptococcus pneumoniae CDC1087-00]
 gi|183571693|gb|EDT92221.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP195]
 gi|183573869|gb|EDT94397.1| exodeoxyribonuclease III [Streptococcus pneumoniae CDC0288-04]
 gi|183578942|gb|EDT99470.1| exodeoxyribonuclease III [Streptococcus pneumoniae MLV-016]
 gi|220675044|emb|CAR69622.1| exodeoxyribonuclease [Streptococcus pneumoniae ATCC 700669]
 gi|225724139|gb|ACO19992.1| exodeoxyribonuclease III [Streptococcus pneumoniae JJA]
 gi|301794808|emb|CBW37264.1| exodeoxyribonuclease [Streptococcus pneumoniae INV104]
 gi|301802537|emb|CBW35298.1| exodeoxyribonuclease [Streptococcus pneumoniae INV200]
 gi|302598356|gb|EFL65400.1| exodeoxyribonuclease [Streptococcus pneumoniae BS455]
 gi|306409994|gb|ADM85421.1| Exonuclease III [Streptococcus pneumoniae AP200]
 gi|306485101|gb|ADM91970.1| exodeoxyribonuclease III [Streptococcus pneumoniae 670-6B]
 gi|332072666|gb|EGI83149.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA17570]
 gi|332072995|gb|EGI83476.1| exodeoxyribonuclease III [Streptococcus pneumoniae GA17545]
          Length = 275

 Score =  131 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 62/283 (21%), Positives = 98/283 (34%), Gaps = 31/283 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDK---NFPFETL 50
           + + +WN++S+ A +            +   +   N DII +QETK   K       E L
Sbjct: 1   MKLISWNIDSLNAALTSDSARAKLSQEVLQTLVAENADIIAIQETKLSAKGPTKKHVEIL 60

Query: 51  QSL--NYHIETCGQKS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
           + L   Y       +      Y G   L K +    ++                      
Sbjct: 61  EELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAPSTMDLEGRIITLEFD 120

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                       G+ +   +                  L+ E+P++  GDYN+     D 
Sbjct: 121 AFFVTQVYTPNAGDGLKRLEERQVWDVKYAEY---LAELDKEKPVLATGDYNVAHNEIDL 177

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221
            NP        FT E R  F  L   GFTD  R  H D    Y++W   +  S   N G 
Sbjct: 178 ANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHVHGDVPERYTWWAQRSKTSKINNTGW 237

Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           RID+ + S      +  +  ID+  R      DHTP+++ +D+
Sbjct: 238 RIDYWLTSNRIADKVTKSDMIDSGARQ-----DHTPIVLEIDL 275


>gi|209558893|ref|YP_002285365.1| Putative 3-exo-deoxyribonuclease [Streptococcus pyogenes NZ131]
 gi|209540094|gb|ACI60670.1| Putative 3-exo-deoxyribonuclease [Streptococcus pyogenes NZ131]
          Length = 303

 Score =  131 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 59/283 (20%), Positives = 101/283 (35%), Gaps = 31/283 (10%)

Query: 4   VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + + +WN++S+ A +            +   +   + DII +QETK   K    + +++L
Sbjct: 29  MKLISWNIDSLNAALTGESPRALLSRAVLDTLVAQDADIIAIQETKLSAKGPSKKHIEAL 88

Query: 54  -NYHIETCGQKSYN---------GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
            +Y          +         G   L K     ++T                      
Sbjct: 89  LSYFPNYLHVWRSSVEPARKGYAGTMFLYKNTLNPVITFPEIGAPTTMDAEGRIITLEFE 148

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                       G+ +                      L+ ++P++  GDYN+  +  D 
Sbjct: 149 DFFVTQVYTPNAGDGLRRLDDRQIWDHKYADY---LTELDAQKPVLATGDYNVAHKEIDL 205

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221
            NP        FT E RQ F  L   GFTD  R  H D  H+Y++W   +  S   N G 
Sbjct: 206 ANPSSNRRSPGFTDEERQGFTNLLARGFTDTFRHLHGDIPHVYTWWAQRSKTSKINNTGW 265

Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           RID+ + S      +  +  I +  R      DHTP+++ +D+
Sbjct: 266 RIDYWLASNRIVDKVKRSEMISSGERQ-----DHTPILLDIDL 303


>gi|170088468|ref|XP_001875457.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164650657|gb|EDR14898.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 343

 Score =  131 bits (328), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 62/286 (21%), Positives = 113/286 (39%), Gaps = 33/286 (11%)

Query: 3   VVTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETC 60
            V +ATWN+  + A +      +++  +PDI+ L ETK  D        +   Y +    
Sbjct: 62  TVRLATWNICGLAASQKKGFKYYVEAEDPDILVLTETKVNDVPNDPALTKRFPYAYWSIS 121

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +KSY+G AILSK++P+ +   LPG      +       T+  +   +   Y+ +     
Sbjct: 122 SKKSYSGTAILSKHEPLSVTRVLPG--HPDPSHVKGRIITLEFENFYVVGTYVVNAGTDL 179

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII------------ 168
            T  + K   +        + L+ ++P+I+ GD N+ P     Y                
Sbjct: 180 KTLDEKKEWNVH--FDAYIRDLDSKKPVIWTGDLNVAPTEMGMYCNHPFGPRLITAADLA 237

Query: 169 -----WENDACFTLEVRQSFQ-------KLQNMGFTDAIRATHDTHHLYSFWDYYADSWS 216
                W   A +T     +F+        +    F D  R  H     Y+++ Y  +  +
Sbjct: 238 NPKKKWNKTAGYTEAETTAFRKILASPDDISANKFVDVWRQLHPEDRHYTYFSYRFNCRT 297

Query: 217 KNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
           K  G R+D  +LS      +    I ++  G    SDH P+++ ++
Sbjct: 298 KGLGWRLDMFVLSERMMERVKMCEIRSEIYG---ASDHCPLVMEIE 340


>gi|319947397|ref|ZP_08021629.1| exodeoxyribonuclease [Streptococcus australis ATCC 700641]
 gi|319746337|gb|EFV98598.1| exodeoxyribonuclease [Streptococcus australis ATCC 700641]
          Length = 275

 Score =  130 bits (327), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 60/282 (21%), Positives = 101/282 (35%), Gaps = 29/282 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDK-------NFP 46
           + + +WN++S+ A +           ++   +   N DII +QETK   K          
Sbjct: 1   MKLISWNIDSLNAALTSDSARAKLSQDVLLTLVAENADIIAIQETKLSAKGPTKKHLEVL 60

Query: 47  FETLQSLN--YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
            E        +       +      +    + +      P               T+   
Sbjct: 61  EELFPGYENTWRSSVEPARKGYAGTMFLYKKELTPRVTFPEIGAPSTMDVEGRIITLEFD 120

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
              +  +Y P+         + +I             L+ ++P++  GDYN+  +  D  
Sbjct: 121 DFFVTQVYTPNAGDGLKRLEERQIWD--AKYADYLAELDQQKPVLATGDYNVAHKEIDLA 178

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIR 222
           NP        FT E R  F  L   GFTD  R  H D    Y++W   +  S   N G R
Sbjct: 179 NPASNRRSPGFTDEERAGFTNLLAKGFTDTFRHLHGDLPDQYTWWAQRSKTSKINNTGWR 238

Query: 223 IDHIMLSPEATSLL-HSARIDTKPRGWTKPSDHTPVIVSLDI 263
           ID+ + S      +  SA ID+  R      DHTP+++ +D+
Sbjct: 239 IDYWLTSNRIADKVTKSAMIDSGARQ-----DHTPIVMEIDL 275


>gi|317509131|ref|ZP_07966757.1| exodeoxyribonuclease III [Segniliparus rugosus ATCC BAA-974]
 gi|316252567|gb|EFV12011.1| exodeoxyribonuclease III [Segniliparus rugosus ATCC BAA-974]
          Length = 267

 Score =  130 bits (327), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 61/269 (22%), Positives = 98/269 (36%), Gaps = 19/269 (7%)

Query: 7   ATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKNFPFE----TLQSLNY 55
           AT NVN +RA +         L  W+ E+  + ICLQE +  +                 
Sbjct: 2   ATVNVNGVRAAVKARSEENTGLLGWLGESPAEYICLQEVRATEAEARAALAPVLADGWKL 61

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
            +    QK  +GVAILS+ +P  +             R+IEA F        + +LYLP 
Sbjct: 62  ALAPAAQKGRSGVAILSRREPDAVRIGFGDPQFADSGRYIEADFGT----FTLASLYLPS 117

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
           G    + +  +K  ++K F  +          ++  GD+NI     D  N       + F
Sbjct: 118 GE-AETERQVEKDQFLKTFGEYLKPLARKRRDVLICGDWNIAHTELDIKNWKGNLKASGF 176

Query: 176 TLEVRQSFQKLQNMGFTDA---IRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
               R    ++   G                 YS+W +   ++  + G RID+ + + + 
Sbjct: 177 LPHERAWLSEVFGEGSDWTDVQRSFHPGEAGPYSWWSFRGQAFDNDSGWRIDYHVANKQL 236

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
                        R   + SDH PVIV  
Sbjct: 237 AKRAARVVTQRAERYDLRWSDHAPVIVEY 265


>gi|224074261|ref|XP_002304326.1| predicted protein [Populus trichocarpa]
 gi|222841758|gb|EEE79305.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  130 bits (327), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 59/344 (17%), Positives = 103/344 (29%), Gaps = 64/344 (18%)

Query: 2   SVVTVATWNVNSIRARIHNLA---AWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           + + + ++NVN +R R+         +   + DIIC QETK   +    + + +  Y   
Sbjct: 3   NPIKIVSYNVNGLRQRVSQFGSLSNLLNTFDADIICFQETKLRRQELTSDLVIADGYESF 62

Query: 59  TCGQKS-------YNGVAILSKYQPIEIVT----------HLPGDDLDVQARFIEATFT- 100
               ++       Y+GVA   + +     T             G     +       F  
Sbjct: 63  FSCTRTKDKGRTGYSGVATFCRVKSAFSSTEVALPVAAEEGFTGFIDRCKRNEGLEEFEK 122

Query: 101 --------------INTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEE 146
                          +     + NLY P      + + + K+ + K   +     L    
Sbjct: 123 DELVKVDSEGRCVVTDHNHFVLFNLYGPRAAHDDTERIEFKMKFFKILQKRWENLLHEGR 182

Query: 147 PLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYS 206
            +   GD NI P   D  +         F    R        +          D    Y+
Sbjct: 183 RVFVVGDLNIAPTAMDRCDADSDFEKNEFRRWFRSILMMSGGLFVDVFRAKHPDRREAYT 242

Query: 207 FWDYYADSWSKNKGIRIDHIMLSPE-------------ATSLLHSARIDTKPRGWT---- 249
            W     +   N G RIDHI+ +                +  +    I T+ + W     
Sbjct: 243 CWSSSTGAELFNFGSRIDHILCAGPCLHQEHDLQGHNFLSCHVKECDILTQYKRWKPGDS 302

Query: 250 -----------KPSDHTPVIVSL-DIPEPRKKQQDSTSQNMKPI 281
                      + SDH PV +SL +I +  +      S    P+
Sbjct: 303 TRWKGGRGIKLEGSDHAPVYMSLEEICDIPRHSTPPLSARYLPM 346


>gi|15674547|ref|NP_268721.1| putative 3'-exo-deoxyribonuclease [Streptococcus pyogenes M1 GAS]
 gi|13621652|gb|AAK33442.1| putative 3'-exo-deoxyribonuclease [Streptococcus pyogenes M1 GAS]
          Length = 275

 Score =  130 bits (327), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 59/283 (20%), Positives = 101/283 (35%), Gaps = 31/283 (10%)

Query: 4   VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + + +WN++S+ A +            +   +   + DII +QETK   K    + +++L
Sbjct: 1   MKLISWNIDSLNAALTGESPRALLSRAVLDTLVAQDADIIAIQETKLSAKGPTKKHIETL 60

Query: 54  -NYHIETCGQKSYN---------GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
            +Y          +         G   L K     ++T                      
Sbjct: 61  LSYFPNYLHVWRSSVEPARKGYAGTMFLYKNTLNPVITFPEIGAPTTMDAEGRIITLEFE 120

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                       G+ +                      L+ ++P++  GDYN+  +  D 
Sbjct: 121 DFFVTQVYTPNAGDGLRRLDDRQIWDHKYADY---LTELDAQKPVLATGDYNVAHKEIDL 177

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221
            NP        FT E RQ F  L   GFTD  R  H D  H+Y++W   +  S   N G 
Sbjct: 178 ANPNSNRRSPGFTDEERQGFTNLLARGFTDTFRHVHGDIPHVYTWWAQRSKTSKINNTGW 237

Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           RID+ + S      +  +  I +  R      DHTP+++ +D+
Sbjct: 238 RIDYWLASNRLVDKVKRSEMISSGERQ-----DHTPILLDIDL 275


>gi|55823454|ref|YP_141895.1| 3'-exo-deoxyribonuclease [Streptococcus thermophilus CNRZ1066]
 gi|55739439|gb|AAV63080.1| 3'-exo-deoxyribonuclease [Streptococcus thermophilus CNRZ1066]
          Length = 275

 Score =  130 bits (327), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 59/282 (20%), Positives = 102/282 (36%), Gaps = 29/282 (10%)

Query: 4   VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDK-------NFP 46
           + + +WN++S+ A +            +   +   N DII +QETK   K          
Sbjct: 1   MKLISWNIDSLNAALTGDSARAQLSRAVIDTLVTENADIIAIQETKLSAKGPTKKHLQIL 60

Query: 47  FETLQSL--NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
            +        +       +      +    + +  V   P               T+   
Sbjct: 61  EDYFPDYVITWRSSVEPARKGYAGTMFLYKKELTPVITYPEIGAPSTMDCEGRIITLEFD 120

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
           T  +  +Y P+         + +I             L+ ++P++  GDYN+  +  D  
Sbjct: 121 TFFVTQVYTPNAGDGLKRLLERQIWD--EKYADYLAELDAQKPVLATGDYNVAHKEIDLA 178

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIR 222
           NP        FT E R  F  L N GFTD  R  + D    Y++W   +  S   N G R
Sbjct: 179 NPSSNRRSPGFTDEERAGFTNLLNKGFTDTYRHLNGDVTGAYTWWAQRSKTSKINNTGWR 238

Query: 223 IDHIMLSPEATSLLHSA-RIDTKPRGWTKPSDHTPVIVSLDI 263
           ID+ + S      +  +  ID+  R      DHTP+++ +D+
Sbjct: 239 IDYWLTSNRIADKVIKSNMIDSGDRQ-----DHTPIVLEIDL 275


>gi|315037291|ref|YP_004030859.1| Exodeoxyribonuclease III [Lactobacillus amylovorus GRL 1112]
 gi|325955769|ref|YP_004286379.1| Exodeoxyribonuclease III [Lactobacillus acidophilus 30SC]
 gi|312275424|gb|ADQ58064.1| Exodeoxyribonuclease III [Lactobacillus amylovorus GRL 1112]
 gi|325332334|gb|ADZ06242.1| Exodeoxyribonuclease III [Lactobacillus acidophilus 30SC]
 gi|327182596|gb|AEA31043.1| Exodeoxyribonuclease III [Lactobacillus amylovorus GRL 1118]
          Length = 275

 Score =  130 bits (327), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 62/280 (22%), Positives = 106/280 (37%), Gaps = 25/280 (8%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTED-------KNFP 46
           + + +WN++S+ A +            +   I + NPDII +QETK          +   
Sbjct: 1   MILISWNIDSLNAALTGTSARAEETRQVLDKIHDANPDIIAIQETKLRATGPTKKHQTVL 60

Query: 47  FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
            E     +Y   +  + +  G A        E+        + V          I     
Sbjct: 61  AEKFPEYDYVWRSSEEPARKGYAGTMYLYKKELTPKASYPTIGVPDTMDAEGRIITLDFD 120

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
           +     +   N  +  K                 +L+ E+P++ +GDYN      D  +P
Sbjct: 121 KFFVTQVYTPNSGSGLKRLADRQVWDEKYTEYLHKLDQEKPVLASGDYNCAHTEIDLKHP 180

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYY-ADSWSKNKGIRID 224
               + A FT E R  F  L N GFTD  R  H D   +YS+W      + + N G RID
Sbjct: 181 ENNHHSAGFTDEERVDFTNLLNAGFTDTFRKVHGDITDVYSWWAQRVRTAKANNSGWRID 240

Query: 225 HIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           + ++S      +  +  +DT  R      DH P+++ +++
Sbjct: 241 YWLVSNRIADKVVRSEMMDTGKRA-----DHCPILLEINL 275


>gi|262283107|ref|ZP_06060874.1| exodeoxyribonuclease III [Streptococcus sp. 2_1_36FAA]
 gi|262261359|gb|EEY80058.1| exodeoxyribonuclease III [Streptococcus sp. 2_1_36FAA]
          Length = 275

 Score =  130 bits (327), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 59/283 (20%), Positives = 99/283 (34%), Gaps = 31/283 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + + +WN++S+ A +            +   ++  + DII +QETK        + L+ L
Sbjct: 1   MKLISWNIDSLNAALTSDSARAQLSQAVLQTLQAEDADIIAIQETKLSATGPTKKHLEIL 60

Query: 54  -----NYHIETCGQKS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
                 Y       +      Y G   L K +    VT                      
Sbjct: 61  ANLFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTVTFPEIGAPSTMDVEGRIITLEFD 120

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                       G+ +                      L+ ++P++  GDYN+  +  D 
Sbjct: 121 DFFVTQVYTPNAGDGLKRLD---DRQVWDAKYAEYLATLDQQKPVLATGDYNVAHKEIDL 177

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221
            NP        FT E R  F  L   GFTD  R  H D  + Y++W   +  S   N G 
Sbjct: 178 ANPASNRRSPGFTDEERAGFTNLLAKGFTDTFRHLHGDIPNQYTWWAQRSKTSKINNTGW 237

Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           RID+ + S      +  +  ID+  R      DHTP+++ +++
Sbjct: 238 RIDYWLTSNRVADKVTKSDMIDSGARQ-----DHTPIVMEIEL 275


>gi|259500789|ref|ZP_05743691.1| exodeoxyribonuclease III [Lactobacillus iners DSM 13335]
 gi|302190760|ref|ZP_07267014.1| exonuclease III [Lactobacillus iners AB-1]
 gi|312871137|ref|ZP_07731235.1| exodeoxyribonuclease III [Lactobacillus iners LEAF 3008A-a]
 gi|312872693|ref|ZP_07732758.1| exodeoxyribonuclease III [Lactobacillus iners LEAF 2062A-h1]
 gi|312874955|ref|ZP_07734974.1| exodeoxyribonuclease III [Lactobacillus iners LEAF 2053A-b]
 gi|329919752|ref|ZP_08276703.1| exodeoxyribonuclease III [Lactobacillus iners SPIN 1401G]
 gi|259167483|gb|EEW51978.1| exodeoxyribonuclease III [Lactobacillus iners DSM 13335]
 gi|311089700|gb|EFQ48125.1| exodeoxyribonuclease III [Lactobacillus iners LEAF 2053A-b]
 gi|311091735|gb|EFQ50114.1| exodeoxyribonuclease III [Lactobacillus iners LEAF 2062A-h1]
 gi|311093151|gb|EFQ51497.1| exodeoxyribonuclease III [Lactobacillus iners LEAF 3008A-a]
 gi|328937099|gb|EGG33527.1| exodeoxyribonuclease III [Lactobacillus iners SPIN 1401G]
          Length = 275

 Score =  130 bits (327), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 60/280 (21%), Positives = 109/280 (38%), Gaps = 25/280 (8%)

Query: 4   VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDK-------NFP 46
           +   +WN++S+ A +            +   IKE NPD++ +QETK           +  
Sbjct: 1   MLFISWNIDSLNAALTGDSDRAHETRSVLNKIKEANPDVVAIQETKLRANGPTKKHCDIL 60

Query: 47  FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
            +  +   Y   +  + +    A             +    +       +    I  +  
Sbjct: 61  ADIFEDYQYVWRSSQEPARKSYAGTMFLYKKNYHPQVTYPLIGAPDTMDQEGRIITLEFD 120

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
                 +   N     K            +    +L+  +P+I +GDYN+  Q  D  +P
Sbjct: 121 TFYLTQVYTPNSGNELKRLADREIWDTKYQEYLAKLDQNKPVIASGDYNVAHQEIDLKHP 180

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYY-ADSWSKNKGIRID 224
               ++A FT E R+ F KL ++GF D  R  + D   +YS+W      S + N G RID
Sbjct: 181 ETNHHNAGFTDEERKGFSKLLSLGFIDTFRYINGDITDVYSWWSQRIRTSKTNNAGWRID 240

Query: 225 HIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           + ++S      +  ++ IDT  R      DH P+++ +D+
Sbjct: 241 YYLVSQRLADKIEQSKMIDTGDRK-----DHCPILLKIDL 275


>gi|306824688|ref|ZP_07458032.1| exodeoxyribonuclease III [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304432899|gb|EFM35871.1| exodeoxyribonuclease III [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 275

 Score =  130 bits (327), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 60/283 (21%), Positives = 101/283 (35%), Gaps = 31/283 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + + +WN++S+ A +            +   +   N DII +QETK   K    + L+ L
Sbjct: 1   MKLISWNIDSLNAALTSDSARAKLSQEVLQILVAENADIIAIQETKLSAKGPTKKHLEIL 60

Query: 54  -----NYHIETCGQKS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
                 Y       +      Y G   L K +    ++                      
Sbjct: 61  EELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAPSTMDLEGRIITLEFD 120

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                       G+ +   +                 +L+ E+P++  GDYN+  +  D 
Sbjct: 121 TFFVTQVYTPNAGDGLKRLEERQVWDVKYAEY---LAQLDKEKPVLATGDYNVAHKEIDL 177

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221
            NP        FT E R  F  L   GFTD  R  H D    Y++W   +  S   N G 
Sbjct: 178 ANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHIHGDVPERYTWWAQRSKTSKINNTGW 237

Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           RID+ + S   +  +  +  ID+  R      DHTP+++ +++
Sbjct: 238 RIDYWLTSNRVSDKVTKSDMIDSGARQ-----DHTPIVLEIEL 275


>gi|116628238|ref|YP_820857.1| 3'-exo-deoxyribonuclease [Streptococcus thermophilus LMD-9]
 gi|116101515|gb|ABJ66661.1| Exonuclease III [Streptococcus thermophilus LMD-9]
 gi|312278865|gb|ADQ63522.1| Exonuclease III [Streptococcus thermophilus ND03]
          Length = 275

 Score =  130 bits (327), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 58/282 (20%), Positives = 101/282 (35%), Gaps = 29/282 (10%)

Query: 4   VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDK-------NFP 46
           + + +WN++S+ A +            +   +   N DII +QETK   K          
Sbjct: 1   MKLISWNIDSLNAALTGDSTRAQLSRAVIDTLVTENADIIAIQETKLSAKGPTKKHLQIL 60

Query: 47  FETLQSL--NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
            +        +       +      +    + +  V   P               T+   
Sbjct: 61  EDYFPDYVITWRSSVEPARKGYAGTMFLYKKELTPVITYPEIGAPSTMDCEGRIITLEFD 120

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
           T  +  +Y P+         + +I             L+ ++P++  GDYN+  +  D  
Sbjct: 121 TFFVTQVYTPNAGDGLKRLLERQIWD--EKYADYLAELDAQKPVLATGDYNVAHKEIDLA 178

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIR 222
           NP        FT E R  F  L N GF D  R  + D    Y++W   +  S   N G R
Sbjct: 179 NPSSNRRSPGFTDEERAGFTNLLNKGFIDTYRHLNGDVTGAYTWWAQRSKTSKINNTGWR 238

Query: 223 IDHIMLSPEATSLLHSA-RIDTKPRGWTKPSDHTPVIVSLDI 263
           ID+ + S      +  +  ID+  R      DHTP+++ +D+
Sbjct: 239 IDYWLTSNRIADKVIKSNMIDSGDRQ-----DHTPIVLEIDL 275


>gi|313891277|ref|ZP_07824895.1| exodeoxyribonuclease III [Streptococcus pseudoporcinus SPIN 20026]
 gi|313120344|gb|EFR43465.1| exodeoxyribonuclease III [Streptococcus pseudoporcinus SPIN 20026]
          Length = 275

 Score =  130 bits (326), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 60/283 (21%), Positives = 102/283 (36%), Gaps = 31/283 (10%)

Query: 4   VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFETLQ-S 52
           + + +WN++S+ A +            +   +   + DII +QETK        + L+  
Sbjct: 1   MKLISWNIDSLNAALTGESPRALLSRAVIDRLVSEDADIIAIQETKLSATGPTKKHLETI 60

Query: 53  LNYHIETCGQKSYN---------GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
           L+Y          +         G   L K     +VT                      
Sbjct: 61  LSYFPNYLHVWRSSVEPARKGYAGTMFLYKQTLNPVVTFPEIGAPTTMDSEGRIITLEFE 120

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                       G+ +       +             +L+ ++P++  GDYN+  +  D 
Sbjct: 121 DFFVTQVYTPNAGDGLRRLADRQEWDIKYADY---LTQLDAQKPVLATGDYNVAHKEIDL 177

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221
            NP      A FT E R  F  L   GFTD  R  H D  ++Y++W   +  S   N G 
Sbjct: 178 ANPSSNRRSAGFTDEERAGFTALLEKGFTDTFRHLHGDLPNVYTWWAQRSKTSKMNNTGW 237

Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           RID+ + S      +  +  ID+  R      DHTP+++ +D+
Sbjct: 238 RIDYWLTSNRIADKVLKSEMIDSGARQ-----DHTPILLEIDL 275


>gi|268318601|ref|YP_003292257.1| exodeoxyribonuclease [Lactobacillus johnsonii FI9785]
 gi|262396976|emb|CAX65990.1| exodeoxyribonuclease [Lactobacillus johnsonii FI9785]
          Length = 275

 Score =  130 bits (326), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 65/282 (23%), Positives = 114/282 (40%), Gaps = 29/282 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTED-------KNFP 46
           + + +WN++S+ A +           ++   IKE + DII +QETK          +   
Sbjct: 1   MRLISWNIDSLNAALTSDSPRAQLTRSVLNTIKEKDADIIAIQETKLRSTGPTKKHQEVL 60

Query: 47  FETLQSLNYHIETCGQKSY--NGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
            E   + +Y   +  + +       +      +      P         +     T+   
Sbjct: 61  AEMFPNYDYVWRSSEEPARKGYAGTMFLYKNTLTPEVTKPAIGAPDTMDYEGRILTLEFD 120

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
              +  +Y P+         D +I           Q+L+  +P+I +GDYN+   P D  
Sbjct: 121 NYYVTQVYTPNSGNELKRLEDRQIWD--EKYTEYLQKLDKSKPVIASGDYNVAHTPIDLK 178

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYY-ADSWSKNKGIR 222
           +P    ++A FT E RQ F KL  +GFTD  R  H     +YS+W      S + N G R
Sbjct: 179 HPENNHHNAGFTDEERQDFDKLLKLGFTDTFRKVHGNIEGVYSWWAQRVRTSKANNSGWR 238

Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           ID+ ++S      +  +  IDT  R      DH P+++ +++
Sbjct: 239 IDYYIVSDRIADQVTKSEMIDTGDRK-----DHCPIMLEINL 275


>gi|55821526|ref|YP_139968.1| 3'-exo-deoxyribonuclease [Streptococcus thermophilus LMG 18311]
 gi|55737511|gb|AAV61153.1| 3'-exo-deoxyribonuclease [Streptococcus thermophilus LMG 18311]
          Length = 275

 Score =  130 bits (326), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 58/282 (20%), Positives = 102/282 (36%), Gaps = 29/282 (10%)

Query: 4   VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDK-------NFP 46
           + + +WN++S+ A +            +   +   N DII +QETK   K          
Sbjct: 1   MKLISWNIDSLNAALTGDSARAQLSRAVIDTLVTENADIIAIQETKLSAKGPTKKHLQIL 60

Query: 47  FETLQSL--NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
            +        +       +      +    + +  V   P               T+   
Sbjct: 61  EDYFPDYVITWRSSVEPARKGYAGTMFLYKKELTPVITYPEIGAPSTMDCEGRIITLEFD 120

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
           T  +  +Y P+         + +I    +        L+ ++P++  GDYN+  +  D  
Sbjct: 121 TFFVTQVYTPNAGDGLKRLLERQIWD--KKYADYLAELDAQKPVLATGDYNVAHKEIDLA 178

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIR 222
           NP        FT E R  F  L N GF D  R  + D    Y++W   +  S   N G R
Sbjct: 179 NPSSNRRSPGFTDEERAGFTNLLNKGFIDTYRHLNGDVTGAYTWWAQRSKTSKINNTGWR 238

Query: 223 IDHIMLSPEATSLLHSA-RIDTKPRGWTKPSDHTPVIVSLDI 263
           ID+ + S      +  +  ID+  R      DHTP+++ +D+
Sbjct: 239 IDYWLTSNRIADKVIKSNMIDSGDRQ-----DHTPIVLEIDL 275


>gi|289167379|ref|YP_003445648.1| exodeoxyribonuclease III [Streptococcus mitis B6]
 gi|288906946|emb|CBJ21780.1| exodeoxyribonuclease III [Streptococcus mitis B6]
          Length = 275

 Score =  130 bits (326), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 62/283 (21%), Positives = 99/283 (34%), Gaps = 31/283 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + + +WN++S+ A +            +   +   N DII +QETK   K    + L+ L
Sbjct: 1   MKLISWNIDSLNAALTSDSARAKLSQEVLQTLVAENADIIAIQETKLSAKGPTKKHLEIL 60

Query: 54  -----NYHIETCGQKS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
                 Y       +      Y G   L K +    VT                      
Sbjct: 61  EELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTVTFPEIGAPSTMDLEGRIITLEFD 120

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
           +           G+ +   +                  L+ E+P++  GDYN+     D 
Sbjct: 121 EFFVTQVYTPNAGDGLKRLEERQVWDVKYAEY---LAELDKEKPVLATGDYNVAHNEIDL 177

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221
            NP        FT E R  F  L   GFTD  R  H D    Y++W   +  S   N G 
Sbjct: 178 ANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHIHGDVPERYTWWAQRSKTSKINNTGW 237

Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           RID+ + S      +  +  ID+  R      DHTP+++ +++
Sbjct: 238 RIDYWLTSNRVADKVTKSDMIDSGARQ-----DHTPIVMEIEL 275


>gi|309806468|ref|ZP_07700473.1| exodeoxyribonuclease III [Lactobacillus iners LactinV 03V1-b]
 gi|308167141|gb|EFO69315.1| exodeoxyribonuclease III [Lactobacillus iners LactinV 03V1-b]
          Length = 275

 Score =  130 bits (326), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 60/280 (21%), Positives = 109/280 (38%), Gaps = 25/280 (8%)

Query: 4   VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDK-------NFP 46
           +   +WN++S+ A +            +   IKE NPD++ +QETK           +  
Sbjct: 1   MLFISWNIDSLNAALTGDSDRAHETRSVLNKIKEANPDVVAIQETKLRANGPTKKHCDIL 60

Query: 47  FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
            +  +   Y   +  + +    A             +    +       +    I  +  
Sbjct: 61  ADIFEDYQYVWRSSQEPARKSYAGTMFLYKKNYHPQVSYPLIGAPDTMDQEGRIITLEFD 120

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
                 +   N     K            +    +L+  +P+I +GDYN+  Q  D  +P
Sbjct: 121 TFYLTQVYTPNSGNELKRLADREIWDTKYQEYLAKLDQNKPVIASGDYNVAHQEIDLKHP 180

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYY-ADSWSKNKGIRID 224
               ++A FT E R+ F KL ++GF D  R  + D   +YS+W      S + N G RID
Sbjct: 181 ETNHHNAGFTDEERKGFSKLLSLGFIDTFRYINGDITDVYSWWSQRIRTSKTNNAGWRID 240

Query: 225 HIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           + ++S      +  ++ IDT  R      DH P+++ +D+
Sbjct: 241 YYLVSQRLADKIEQSKMIDTGDRK-----DHCPILLKIDL 275


>gi|256851697|ref|ZP_05557085.1| exodeoxyribonuclease III [Lactobacillus jensenii 27-2-CHN]
 gi|260661585|ref|ZP_05862497.1| exodeoxyribonuclease III [Lactobacillus jensenii 115-3-CHN]
 gi|282934219|ref|ZP_06339496.1| exodeoxyribonuclease III [Lactobacillus jensenii 208-1]
 gi|256615655|gb|EEU20844.1| exodeoxyribonuclease III [Lactobacillus jensenii 27-2-CHN]
 gi|260547642|gb|EEX23620.1| exodeoxyribonuclease III [Lactobacillus jensenii 115-3-CHN]
 gi|281301693|gb|EFA93960.1| exodeoxyribonuclease III [Lactobacillus jensenii 208-1]
          Length = 275

 Score =  130 bits (326), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 63/283 (22%), Positives = 108/283 (38%), Gaps = 31/283 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTED-------KNFP 46
           + + +WN++S+ A +           ++   I E  PDI+ +QETK              
Sbjct: 1   MLLISWNIDSLNAALTSDSARAQKTRHVLTQIAEKKPDILAIQETKLRATGPTKKHAEIL 60

Query: 47  FETLQSLNYHI---ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
            +      Y     E   +K Y G   L K     +VT+      D              
Sbjct: 61  AKLFPDYEYVWRSSEEPARKGYAGTMYLYKNTLEPVVTYPTIGAPDTMDFEGRIITLEFP 120

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
           +           G  +             +      Q+L+ E+P++ +GDYN+  +  D 
Sbjct: 121 EYFVTQVYTPNAGGELKRLG---DRQGWDKKYIEYLQKLDKEKPVLASGDYNVAHEEIDL 177

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYAD-SWSKNKGI 221
            +P    + A FT E R  F +L + GFTD+ R  H     +YS+W      + + N G 
Sbjct: 178 KHPENNHHSAGFTDEERADFTELLSTGFTDSFRKIHGNIPEVYSWWAQRIKTAKANNSGW 237

Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           RID+ + S      +  +  +DT  R      DH P+++ +D+
Sbjct: 238 RIDYWLTSNRIADKIKKSEMMDTGERA-----DHCPIVLEIDL 275


>gi|21909832|ref|NP_664100.1| putative 3'-exo-deoxyribonuclease [Streptococcus pyogenes MGAS315]
 gi|21904018|gb|AAM78903.1| putative 3'-exo-deoxyribonuclease [Streptococcus pyogenes MGAS315]
          Length = 275

 Score =  130 bits (326), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 59/283 (20%), Positives = 101/283 (35%), Gaps = 31/283 (10%)

Query: 4   VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + + +WN++S+ A +            +   +   + DII +QETK   K    + +++L
Sbjct: 1   MKLISWNIDSLNAALTGESPRALLSRAVLDTLVAQDADIIAIQETKLSAKGPTKKHIEAL 60

Query: 54  -NYHIETCGQKSYN---------GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
            +Y          +         G   L K     ++T                      
Sbjct: 61  LSYFPNYLHVWRSSVEPARKGYAGTMFLYKNTLNPVITFPEIGAPTTMDAEGRIITLEFE 120

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                       G+ +                      L+ ++P++  GDYN+  +  D 
Sbjct: 121 DFFVTQVYTPNAGDGLRRLDDRQIWDHKYADY---LTELDAQKPVLATGDYNVAHKEIDL 177

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221
            NP        FT E RQ F  L   GFTD  R  H D  H+Y++W   +  S   N G 
Sbjct: 178 ANPSSNRRSPGFTDEERQGFTNLLARGFTDTFRHVHGDIPHVYTWWAQRSKTSKINNTGW 237

Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           RID+ + S      +  +  I +  R      DHTP+++ +D+
Sbjct: 238 RIDYWLASNRIVDKVKRSEMISSGERQ-----DHTPILLDIDL 275


>gi|307707550|ref|ZP_07644032.1| exodeoxyribonuclease III [Streptococcus mitis NCTC 12261]
 gi|307616502|gb|EFN95693.1| exodeoxyribonuclease III [Streptococcus mitis NCTC 12261]
          Length = 275

 Score =  130 bits (326), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 60/283 (21%), Positives = 98/283 (34%), Gaps = 31/283 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDK-------NFP 46
           + + +WN++S+ A +            +   +   N DII +QETK   K          
Sbjct: 1   MKLISWNIDSLNAALTSDSTRAKLSQEVLQTLVAENADIIAIQETKLSAKGPTKKHLEIL 60

Query: 47  FETLQSLNYHIETCGQKS---YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
            E          +  + +   Y G   L K +    VT                      
Sbjct: 61  EELFPDYENKWRSSQEPARKGYAGTMFLYKKELTPTVTFPEIGAPSTMDLEGRIITLEFD 120

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
           +           G+ +   +                  L+ E+P++ +GDYN+     D 
Sbjct: 121 KFFVTQVYTPNTGDGLKRLEERQIWDVKYAEY---LAELDKEKPVLASGDYNVAHNEIDL 177

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221
            NP        FT E R  F  L   GFTD  R  H D    Y++W   +  S   N G 
Sbjct: 178 ANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHIHGDVPERYTWWAQRSKTSKINNTGW 237

Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           RID+ + S      +  +  ID+  R      DHTP+++ +++
Sbjct: 238 RIDYWLTSNRIADKVTKSDMIDSGARQ-----DHTPIVLEIEL 275


>gi|312873321|ref|ZP_07733376.1| exodeoxyribonuclease III [Lactobacillus iners LEAF 2052A-d]
 gi|311091201|gb|EFQ49590.1| exodeoxyribonuclease III [Lactobacillus iners LEAF 2052A-d]
          Length = 275

 Score =  130 bits (326), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 63/282 (22%), Positives = 115/282 (40%), Gaps = 29/282 (10%)

Query: 4   VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDK-------NFP 46
           +   +WN++S+ A +            +   IKE NPD++ +QETK           +  
Sbjct: 1   MLFISWNIDSLNAALTGDSDRAHETRSVLNKIKEANPDVVAIQETKLRANGPTKKHCDIL 60

Query: 47  FETLQSLNYHIETCGQKSY--NGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
            +  +   Y   +  + +       +    +        P               T+   
Sbjct: 61  ADIFEDYQYVWRSSQEPARKSYAGTMFLYKKNYHPQVSYPLIGAPDTMDQEGRIITLEFN 120

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
           +  +  +Y P+         D +I   K   +    +L+  +P+I +GDYN+  Q  D  
Sbjct: 121 SFYLTQVYTPNSGNELKRLADREIWDTK--YQEYLTKLDQNKPVIASGDYNVAHQEIDLK 178

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYY-ADSWSKNKGIR 222
           +P    ++A FT E R+ F KL ++GF D  R  + D   +YS+W      S + N G R
Sbjct: 179 HPETNHHNAGFTDEERKGFSKLLSLGFIDTFRYINGDITDVYSWWSQRIRTSKTNNAGWR 238

Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           ID+ ++S      +  ++ IDT  R      DH P+++ +D+
Sbjct: 239 IDYYLVSQRLADKIEQSKMIDTGDRK-----DHCPILLKIDL 275


>gi|50913711|ref|YP_059683.1| exodeoxyribonuclease III [Streptococcus pyogenes MGAS10394]
 gi|50902785|gb|AAT86500.1| Exodeoxyribonuclease III [Streptococcus pyogenes MGAS10394]
          Length = 303

 Score =  130 bits (326), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 60/282 (21%), Positives = 101/282 (35%), Gaps = 31/282 (10%)

Query: 4   VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + + +WN++S+ A +            +   +   + DII +QETK   K    + +++L
Sbjct: 29  MKLISWNIDSLNAALTGESPRALLSRAVLDTLVAQDADIIAIQETKLSAKGPTKKHIEAL 88

Query: 54  -NYHIETCGQKSYN---------GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
            +Y          +         G   L K     ++T    D                 
Sbjct: 89  LSYFPNYLHVWRSSVEPARKGYAGTMFLYKNTLNPVITFPEIDAPTTMDAEGRIITLEFE 148

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                       G+ +                      L+ ++P++  GDYN+  +  D 
Sbjct: 149 DFFVTQVYTPNAGDGLRRLDDRQIWDHKYADY---LTELDAQKPVLATGDYNVAHKEIDL 205

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221
            NP        FT E RQ F  L   GFTD  R  H D  H+Y++W   +  S   N G 
Sbjct: 206 ANPSSNRRSPGFTDEERQGFTNLLARGFTDTFRHLHGDIPHVYTWWAQRSKTSKINNTGW 265

Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLD 262
           RID+ + S      +  +  I +  R      DHTP+++ +D
Sbjct: 266 RIDYWLASNRLVDKVKRSEMISSGERQ-----DHTPILLDID 302


>gi|159113893|ref|XP_001707172.1| Endonuclease/Exonuclease/phosphatase [Giardia lamblia ATCC 50803]
 gi|157435275|gb|EDO79498.1| Endonuclease/Exonuclease/phosphatase [Giardia lamblia ATCC 50803]
          Length = 322

 Score =  130 bits (326), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 57/283 (20%), Positives = 95/283 (33%), Gaps = 29/283 (10%)

Query: 5   TVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL---------- 53
           T+   NVN IR+     L  +I + NPDI+C  ETK     F     +            
Sbjct: 40  TILAINVNGIRSAFSKGLKDFIHKKNPDIVCFSETKLGSSAFAAFMEKEATRDPDTGVYT 99

Query: 54  ---NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
               Y    C   +  G A  + +    +        +       E  F   +       
Sbjct: 100 VMKGYKHVFCCSTAKQGYASTAMFAKESVPVLDLCMQMGDPEFDSEGRFLHVSLPSFELI 159

Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQR-----------LELEEPLIFAGDYNIIPQ 159
                 +   S+            L    +            +   + +++ GD N+   
Sbjct: 160 HVYAPNSGRGSSGKAFTSKNRPANLSTRIKYEKLISKYIGNLVAAGKDVVYCGDLNVAHN 219

Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMG-FTDAIRATHDTHHLYSFWDYYADSWSKN 218
             D YNP        FT E R +F KL +     DA RA H     YS++  +  +  + 
Sbjct: 220 EIDLYNPKSNHFSPGFTDEERNAFSKLLDGHGLIDAFRAMHPHRINYSWFSNFGRAREQK 279

Query: 219 KGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
            G RID+ +++ +    + +  I          SDH P+I++L
Sbjct: 280 HGWRIDYFVVTSKIFKRVTTVDILDDY---NSYSDHVPIIMTL 319


>gi|331265838|ref|YP_004325468.1| exodeoxyribonuclease III [Streptococcus oralis Uo5]
 gi|326682510|emb|CBZ00127.1| exodeoxyribonuclease III [Streptococcus oralis Uo5]
          Length = 275

 Score =  130 bits (326), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 60/283 (21%), Positives = 98/283 (34%), Gaps = 31/283 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + + +WN++S+ A +            +   +   N DII +QETK   K    + L+ L
Sbjct: 1   MKLISWNIDSLNAALTSDSARAKLSQEVLQTLVAENADIIAIQETKLSAKGPTKKHLEIL 60

Query: 54  -----NYHIETCGQKS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
                 Y       +      Y G   L K +    ++                      
Sbjct: 61  EELFQGYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAPSTMDLEGRIITLEFD 120

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                       G+ +                      L+ E+P++  GDYN+  +  D 
Sbjct: 121 TFFVTQVYTPNAGDGLKRLDERQVWDVKYAEY---LAELDKEKPVLATGDYNVAHKEIDL 177

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221
            NP        FT E R  F  L   GFTD  R  H D    Y++W   +  S   N G 
Sbjct: 178 ANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHIHGDVPECYTWWAQRSKTSKINNTGW 237

Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           RID+ + S      +  +  ID+  R      DHTP+++ +++
Sbjct: 238 RIDYWLTSNRVADKVTKSDMIDSGARQ-----DHTPIVLEIEL 275


>gi|71902993|ref|YP_279796.1| exodeoxyribonuclease III [Streptococcus pyogenes MGAS6180]
 gi|71802088|gb|AAX71441.1| exodeoxyribonuclease III [Streptococcus pyogenes MGAS6180]
          Length = 303

 Score =  130 bits (326), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 59/283 (20%), Positives = 101/283 (35%), Gaps = 31/283 (10%)

Query: 4   VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + + +WN++S+ A +            +   +   + DII +QETK   K    + +++L
Sbjct: 29  MKLISWNIDSLNAALTGESPRALLSRAVLDTLVAQDADIIAIQETKLSAKGPTKKHIETL 88

Query: 54  -NYHIETCGQKSYN---------GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
            +Y          +         G   L K     ++T                      
Sbjct: 89  LSYFPNYLHVWRSSVEPARKGYAGTMFLYKNTLNPVITFPEIGAPTTMDAEGRIITLEFE 148

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                       G+ +                      L+ ++P++  GDYN+  +  D 
Sbjct: 149 DFFVTQVYTPNAGDGLRRLDDRQIWDHKYADY---LTELDAQKPVLATGDYNVAHKEIDL 205

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221
            NP        FT E RQ F  L   GFTD  R  H D  H+Y++W   +  S   N G 
Sbjct: 206 ANPSSNRRSPGFTDEERQGFTNLLARGFTDTFRHLHGDIPHVYTWWAQRSKTSKINNTGW 265

Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           RID+ + S      +  +  I +  R      DHTP+++ +D+
Sbjct: 266 RIDYWLASNRIVDKVKRSEMISSGERQ-----DHTPILLDIDL 303


>gi|325913687|ref|ZP_08176049.1| exodeoxyribonuclease III [Lactobacillus iners UPII 60-B]
 gi|325477046|gb|EGC80196.1| exodeoxyribonuclease III [Lactobacillus iners UPII 60-B]
          Length = 275

 Score =  129 bits (325), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 63/282 (22%), Positives = 115/282 (40%), Gaps = 29/282 (10%)

Query: 4   VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDK-------NFP 46
           +   +WN++S+ A +            +   IKE NPD++ +QETK           +  
Sbjct: 1   MLFISWNIDSLNAALTGDSDRAHETRSVLNKIKEANPDVVAIQETKLRANGPTKKHCDIL 60

Query: 47  FETLQSLNYHIETCGQKSY--NGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
            +  +   Y   +  + +       +    +        P               T+   
Sbjct: 61  ADIFEDYQYVWRSSQEPARKSYAGTMFLYKKNYHPQVSYPLIGAPDTMDQEGRIITLEFN 120

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
           +  +  +Y P+         D +I   K   +    +L+  +P+I +GDYN+  Q  D  
Sbjct: 121 SFYLTQVYTPNSGNELKRLADREIWDTK--YQEYLTKLDQNKPVIASGDYNVAHQEIDLK 178

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYY-ADSWSKNKGIR 222
           +P    ++A FT E R+ F KL ++GF D  R  + D   +YS+W      S + N G R
Sbjct: 179 HPETNHHNAGFTDEERKGFSKLLSLGFIDTFRYINGDITDVYSWWSQRIRTSKTNNSGWR 238

Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           ID+ ++S      +  ++ IDT  R      DH P+++ +D+
Sbjct: 239 IDYYLVSQRLADKIEQSKMIDTGDRK-----DHCPILLKIDL 275


>gi|293365984|ref|ZP_06612686.1| exodeoxyribonuclease [Streptococcus oralis ATCC 35037]
 gi|291315527|gb|EFE55978.1| exodeoxyribonuclease [Streptococcus oralis ATCC 35037]
          Length = 275

 Score =  129 bits (325), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 60/283 (21%), Positives = 101/283 (35%), Gaps = 31/283 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + + +WN++S+ A +            +   +   N DII +QETK   K    + L+ L
Sbjct: 1   MKLISWNIDSLNAALTSDSARAKLSQEVLQTLVAENADIIAIQETKLSAKGPTKKHLEIL 60

Query: 54  -----NYHIETCGQKS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
                 Y       +      Y G   L K +    ++                      
Sbjct: 61  EELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAPSTMDLEGRIITLEFE 120

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
           +           G+ +   +                 +L+ E+P++  GDYN+  +  D 
Sbjct: 121 EFFVTQVYTPNAGDGLKRLEERQVWDVKYAEY---LAQLDKEKPVLATGDYNVAHKEIDL 177

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221
            NP        FT E R  F  L   GFTD  R  H D    Y++W   +  S   N G 
Sbjct: 178 ANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHLHGDVPECYTWWAQRSKTSKINNTGW 237

Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           RID+ + S      +  +  ID+  R      DHTP+++ +++
Sbjct: 238 RIDYWLTSNRVADKVTKSDMIDSGARQ-----DHTPIVLEIEL 275


>gi|307710716|ref|ZP_07647145.1| exodeoxyribonuclease III [Streptococcus mitis SK321]
 gi|307617487|gb|EFN96658.1| exodeoxyribonuclease III [Streptococcus mitis SK321]
          Length = 275

 Score =  129 bits (325), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 62/283 (21%), Positives = 99/283 (34%), Gaps = 31/283 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + + +WN++S+ A +            +   +   N DII +QETK   K    + L+ L
Sbjct: 1   MKLISWNIDSLNAALTSDSARAKLSQEVLQTLVAENADIIAIQETKLSAKGPTKKHLEIL 60

Query: 54  -----NYHIETCGQKS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
                 Y       +      Y G   L K +    VT                      
Sbjct: 61  EELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTVTFPEIGAPSTMDLEGRIITLEFD 120

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
           +           G+ +   +                  L+ E+P++  GDYN+     D 
Sbjct: 121 KFFVTQVYTPNAGDGLKRLEERQVWDVKYAEY---LAELDKEKPVLATGDYNVAHNEIDL 177

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221
            NP        FT E R  F  L   GFTD  R  H D    Y++W   +  S   N G 
Sbjct: 178 ANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHIHGDVPERYTWWAQRSKTSKINNTGW 237

Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           RID+ + S      +  +  ID+  R      DHTP+++ +++
Sbjct: 238 RIDYWLTSNRIADNVTKSDMIDSGARQ-----DHTPIVMEIEL 275


>gi|225857433|ref|YP_002738944.1| exodeoxyribonuclease III [Streptococcus pneumoniae P1031]
 gi|225724673|gb|ACO20525.1| exodeoxyribonuclease III [Streptococcus pneumoniae P1031]
          Length = 275

 Score =  129 bits (325), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 58/282 (20%), Positives = 98/282 (34%), Gaps = 29/282 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDK-------NFP 46
           + + +WN++S+ A +            +   +   N DII +QETK   K          
Sbjct: 1   MKLISWNIDSLNAALTSDSARAKLSQEVLQTLVAKNADIIAIQETKLSAKGPTKKHVEIL 60

Query: 47  FETLQSLN--YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
            E        +       +      +    + +      P               T+   
Sbjct: 61  EELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAPSTMDLEGRIITLEFD 120

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
              +  +Y P+         + ++             L+ E+P++  GDYN+     D  
Sbjct: 121 AFFVTQVYTPNAGDGLKRLEERQVWD--AKYAEYLAELDKEKPVLATGDYNVAHNEIDLA 178

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIR 222
           NP        FT E R  F  L   GFTD  R  H D    Y++W   +  S   N G R
Sbjct: 179 NPASNRRSPGFTDEERAGFTNLLATGFTDTFRHVHGDVPERYTWWAQRSKTSKINNTGWR 238

Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           ID+ + S      +  +  ID+  R      DHTP+++ +D+
Sbjct: 239 IDYWLTSNRIADKVTKSDMIDSGARQ-----DHTPIVLEIDL 275


>gi|126342732|ref|XP_001367276.1| PREDICTED: similar to APEX nuclease (apurinic/apyrimidinic
           endonuclease) 2 [Monodelphis domestica]
          Length = 482

 Score =  129 bits (325), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 60/316 (18%), Positives = 101/316 (31%), Gaps = 43/316 (13%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNF--PFETLQSLN-YHIETC 60
           + + +WN+N IR     L   +     D+ CLQET+        P   ++  + Y   + 
Sbjct: 1   MRLVSWNINGIRRSPEALRHLLDSLGADVTCLQETRVTRDLLEEPLAIVEGYSSYFSFSR 60

Query: 61  GQKSYNGVAILSKYQPIE------------IVTHLPGDDLDVQA---------------- 92
            +  Y+GVA   K                       G   + +                 
Sbjct: 61  CRSGYSGVATFCKNNATPGAAEEGLTSLLTTHQGAVGSYGNTEEFTEDELRSLDSEGRAV 120

Query: 93  --RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIF 150
             +    T     +TL I N+Y PH +P    +   K+ + +     A   L+    +I 
Sbjct: 121 LTQHQIRTSDGQEKTLTIMNVYCPHADPEKPERLTYKLRFYRLLQLRAEALLQAGSHVII 180

Query: 151 AGDYNIIPQPHDCYNP----IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH-HLY 205
            GD N   +P D  +P       EN     L          +  F D+ R  H T    +
Sbjct: 181 LGDVNTSHRPLDHCDPADLECFEENPGRQWLTEFLWQPDRDSGLFVDSFRHFHPTTVGAF 240

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEAT-SLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
           + W     +   N G R+D+I+            + +  +  G    SDH P+  +L   
Sbjct: 241 TCWSTATGARLTNYGTRLDYILGDRALVLEEFEDSFLMPEVEG----SDHCPIGATLRTE 296

Query: 265 EPRKKQQDSTSQNMKP 280
                +         P
Sbjct: 297 LIPAPRCPPLCTRYLP 312


>gi|120586985|ref|NP_001073361.1| hypothetical protein LOC317628 [Rattus norvegicus]
 gi|119850781|gb|AAI27531.1| Similar to apurinic/apyrimidinic endonuclease 2 [Rattus norvegicus]
 gi|149031345|gb|EDL86343.1| rCG38932, isoform CRA_a [Rattus norvegicus]
          Length = 516

 Score =  129 bits (325), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 60/335 (17%), Positives = 104/335 (31%), Gaps = 63/335 (18%)

Query: 3   VVTVATWNVNSIRARIHNLA------------AWIKENNPDIICLQETKTEDKNF--PFE 48
           ++ V +WN+N IR+ +  LA              + E + DI+CLQETK        P  
Sbjct: 1   MLRVVSWNINGIRSPLQGLAGQEPSNSPTALRRVLDELDADIVCLQETKVTRDVLTEPLA 60

Query: 49  TLQSLNYHIETCGQKS-YNGVAILSKYQPIEI---------------VTHLPGDDLDVQA 92
            ++  N +      +S Y+GVA   K     +                    G+  +   
Sbjct: 61  IVEGYNSYFSFSRSRSGYSGVATFCKDSATPVAAEEGLSGVFATLNGDIGCYGNTDEFTQ 120

Query: 93  ---------------RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF 137
                          +    T     +TL + N+Y PH +P    +   K+ + +     
Sbjct: 121 EELRVLDSEGRAFLTQHKIRTLEGKEKTLTLINVYCPHADPGKPERLTFKMRFYRLLQIR 180

Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCY-----------NPIIWENDACFTLEVRQSFQKL 186
           A   L     +I  GD N   +P D                 W +               
Sbjct: 181 AEALLAAGSHVIILGDLNTAHRPIDHCDASSLECFEEDPGRKWMDGLLSNPGNEAGPHIG 240

Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT-SLLHSARIDTKP 245
             M               ++ W   + +   N G R+D+++           ++ +  + 
Sbjct: 241 HFMDSFRYF--HPKQQRAFTCWSVVSGARHLNYGSRLDYVLGDRSLVIDTFQASFLLPEV 298

Query: 246 RGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
            G    SDH PV   L++     KQ  +      P
Sbjct: 299 MG----SDHCPVGAVLNVSCVPAKQCPALCTRFLP 329


>gi|313885686|ref|ZP_07819435.1| exodeoxyribonuclease III [Eremococcus coleocola ACS-139-V-Col8]
 gi|312619051|gb|EFR30491.1| exodeoxyribonuclease III [Eremococcus coleocola ACS-139-V-Col8]
          Length = 275

 Score =  129 bits (324), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 65/282 (23%), Positives = 109/282 (38%), Gaps = 29/282 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDK---NFPFETL 50
           + + +WN++S+ A +           ++   I   NPDII +QETK   K       E L
Sbjct: 1   MKLISWNIDSLNAALTSDSNRALLSRDVLQTILNLNPDIIAIQETKLSAKGPTQKHLEIL 60

Query: 51  QSL--NYHIETCGQKSY----NGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
             L  +Y +     +          +      +E     P  +            T+   
Sbjct: 61  ADLFKDYMVVWRSSEEPARKGYAGTMFLYKHDLEPKVTFPEIEAPSPMDAEGRMITLEFD 120

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
              +  +Y P+         D +I   +         L+ ++ ++  GD+N+     D  
Sbjct: 121 DFYVTQVYTPNAGNALKRLADRQIWDQQ--YAAYLASLDQDKIVLATGDFNVAHHEIDLA 178

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIR 222
           +P    + A FT E R  F +L   GFTD  R  H D    Y++W      S   N G R
Sbjct: 179 HPENNHHSAGFTDEERAGFTQLLAHGFTDTFRHLHGDVTGAYTWWAQRVKTSKINNSGWR 238

Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           ID+ ++S  A   +  +  ID+  R      DHTP+++ +DI
Sbjct: 239 IDYWLVSNRAVDRVIQSEIIDSGTRQ-----DHTPILLEIDI 275


>gi|94993733|ref|YP_601831.1| Exodeoxyribonuclease III [Streptococcus pyogenes MGAS10750]
 gi|94547241|gb|ABF37287.1| Exodeoxyribonuclease III [Streptococcus pyogenes MGAS10750]
          Length = 303

 Score =  129 bits (324), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 59/283 (20%), Positives = 101/283 (35%), Gaps = 31/283 (10%)

Query: 4   VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + + +WN++S+ A +            +   +   + DII +QETK   K    + +++L
Sbjct: 29  MKLISWNIDSLNAALTGESPRALLSRAVLDTLVAQDADIIAIQETKLSAKGPTKKHIETL 88

Query: 54  -NYHIETCGQKSYN---------GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
            +Y          +         G   L K     ++T                      
Sbjct: 89  LSYFPNYLHVWRSSVEPARKGYAGTMFLYKNTLNPVITFPEIGAPTTMDAEGRIITLEFE 148

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                       G+ +                      L+ ++P++  GDYN+  +  D 
Sbjct: 149 DFFVTQVYTPNAGDGLRRLDDRQIWDHKYADY---LTELDTQKPVLATGDYNVAHKEIDL 205

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221
            NP        FT E RQ F  L   GFTD  R  H D  H+Y++W   +  S   N G 
Sbjct: 206 ANPSSNRRSPGFTDEERQGFTNLLARGFTDTFRHLHGDIPHVYTWWAQRSKTSKINNTGW 265

Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           RID+ + S      +  +  I +  R      DHTP+++ +D+
Sbjct: 266 RIDYWLASNRIVDKIKRSEMISSGERQ-----DHTPILLDIDL 303


>gi|139474328|ref|YP_001129044.1| exodeoxyribonuclease [Streptococcus pyogenes str. Manfredo]
 gi|134272575|emb|CAM30841.1| exodeoxyribonuclease [Streptococcus pyogenes str. Manfredo]
          Length = 275

 Score =  129 bits (324), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 59/282 (20%), Positives = 100/282 (35%), Gaps = 31/282 (10%)

Query: 4   VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + + +WN++S+ A +            +   +   + DII +QETK   K    + +++L
Sbjct: 1   MKLISWNIDSLNAALTGESPRALLSRAVLDTLVAQDADIIAIQETKLSAKGPTKKHIEAL 60

Query: 54  -NYHIETCGQKSYN---------GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
            +Y          +         G   L K     ++T                      
Sbjct: 61  LSYFPNYLHVWRSSVEPARKGYAGTMFLYKNTLNPVITFPEIGAPTTMDAEGRIITLEFE 120

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                       G+ +                      L+ ++P++  GDYN+  +  D 
Sbjct: 121 DFFVTQVYTPNAGDGLRRLDDRQIWDHKYADY---LTELDAQKPVLATGDYNVAHKEIDL 177

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221
            NP        FT E RQ F  L   GFTD  R  H D  H+Y++W   +  S   N G 
Sbjct: 178 ANPSSNRRSPGFTDEERQGFTNLLARGFTDTFRHLHGDIPHVYTWWAQRSKTSKINNTGW 237

Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLD 262
           RID+ + S      +  +  I +  R      DHTP+++ +D
Sbjct: 238 RIDYWLASNRLVDKVKRSEMISSGERQ-----DHTPILLDID 274


>gi|123385824|ref|XP_001299171.1| exodeoxyribonuclease III family protein [Trichomonas vaginalis G3]
 gi|121879954|gb|EAX86241.1| exodeoxyribonuclease III family protein [Trichomonas vaginalis G3]
          Length = 467

 Score =  129 bits (324), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 63/263 (23%), Positives = 108/263 (41%), Gaps = 16/263 (6%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTED---KNFPFETLQSLNYHIET 59
           + ++T N  S+RA     L  W   + PD+IC+QETK  +    N     L     +   
Sbjct: 12  LKISTINAASLRAAWGKGLHDWALASKPDVICIQETKMHETSQPNIGAFLLDGYQGYFFD 71

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
           C +  ++G AI +K +PI +    P D+            T+      + N Y+P+    
Sbjct: 72  CNKPGFHGTAIYTKIKPISVKESFPDDEGRS--------ITMEFSNFYLINSYVPNAGQK 123

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                  KI      L+     L   + +I+ GD N+  +  D ++P   +  A +T + 
Sbjct: 124 LEK-LTYKIETWNPHLKEYLDELSKTKAVIWTGDLNVAHEEIDIFDPKGKDKTAGYTPQE 182

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R+ F K    G+TD  R  +     +SF+ Y   + +K  G R+D+ ++           
Sbjct: 183 REWFHKFLESGYTDIFRKRYPDKKEFSFYTYRGQAKAKGNGWRLDYFIMDNA---HYKDE 239

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
            ++         SDH PV + LD
Sbjct: 240 LVNDCAMETGDFSDHVPVSLFLD 262


>gi|327490155|gb|EGF21943.1| exodeoxyribonuclease [Streptococcus sanguinis SK1058]
          Length = 322

 Score =  129 bits (324), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 61/283 (21%), Positives = 100/283 (35%), Gaps = 31/283 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + + +WN++S+ A +            +   ++  N DII +QETK        + L+ L
Sbjct: 48  MKLISWNIDSLNAALTSDSARAQLSQAVLQTLQAENADIIAIQETKLSATGPTKKHLEIL 107

Query: 54  NYHIETCGQ----------KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
            Y                 K Y G   L K +    VT                      
Sbjct: 108 TYLFPDYENTWRSSREPARKGYAGTMFLYKKELTPTVTFPEIGAPSTMDVEGRIITLEFD 167

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                       G+ +       +              L+ ++P++  GDYN+  +  D 
Sbjct: 168 GFFVTQVYTPNAGDGLKRLN---ERQVWDAKYAEYLASLDEQKPVLATGDYNVAHKEIDL 224

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221
            NP        FT E R  F  L   GFTD  R  H D  + Y++W   +  S   N G 
Sbjct: 225 ANPASNRRSPGFTDEERAGFTNLLAKGFTDTFRHLHGDIPNQYTWWAQRSKTSKINNTGW 284

Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           RID+ + S      +  +  ID+  R      DHTP+++ +++
Sbjct: 285 RIDYWLTSNRVADKVTKSDMIDSGARQ-----DHTPIVMEIEL 322


>gi|167555152|ref|NP_001107928.1| hypothetical protein LOC797209 [Danio rerio]
 gi|160773435|gb|AAI55114.1| LOC797209 protein [Danio rerio]
          Length = 558

 Score =  129 bits (323), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 56/333 (16%), Positives = 95/333 (28%), Gaps = 59/333 (17%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + TWN+N IR   + +   +   + DIIC+QETK        +T     Y+      +
Sbjct: 1   MKIVTWNINGIRTFKNGIKKILDSFDADIICVQETKVTRDLLDEKTAIVDGYNSYFSFSR 60

Query: 64  SYNG---------------------VAILSKYQPIEIVTHLP-----------GDDLDVQ 91
             +G                       +LS    +                   ++    
Sbjct: 61  GRSGYSGVATYCKDTATPFLAEEGLTGLLSNQGEVIGCYGDQVELTSEEFLALDNEGRAV 120

Query: 92  ARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFA 151
                       Q L + N+Y P  +P    + + K+ + +     A   L     +I  
Sbjct: 121 ISQHHFIGQDGPQKLTVINVYCPRADPDKPERKEFKLQFYRLLQCRAEAILSSGSHVIIL 180

Query: 152 GDYNIIPQPHDCYNPI--IWENDACFTLEVRQSFQKLQN--------------------- 188
           GD N   +P D  +P       D      + Q   +                        
Sbjct: 181 GDVNTSHRPIDHCDPDDVDNFEDNPGRKWLDQFLFETAENSENGNAADEPAEDFQESASG 240

Query: 189 MGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRG 247
             F D+ R  H    +  + W     +   N G RID+I  +      + +  I      
Sbjct: 241 GKFVDSFRYFHPKRSNALTCWSTLTGARQTNYGTRIDYIFSNHSL---VKTFFIGVDIMP 297

Query: 248 WTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
             + SDH PV   L        +         P
Sbjct: 298 EVEGSDHCPVWAQLSCTLQSSPRCPPVCTRHMP 330


>gi|115913980|ref|XP_784420.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
 gi|115941123|ref|XP_001188757.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 596

 Score =  129 bits (323), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 55/344 (15%), Positives = 92/344 (26%), Gaps = 90/344 (26%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V TWN+N +RA    L       + DIICLQETK        + +   +Y+      K
Sbjct: 1   MKVLTWNINGLRACKVPLKELFANLDADIICLQETKITRDQLDNDLVNVDDYNAYFSFSK 60

Query: 64  SYNGVAILSKYQPIEIV--------------------THLPGDDLDVQA----------- 92
             +G + ++ Y                              GD                 
Sbjct: 61  KRSGYSGVATYCKNSTTPVIAEEGLTGLLSHGTKQSLIGCYGDQSAYSPEELLSIDAEGR 120

Query: 93  ----RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPL 148
               +            L I N+Y P        +   K+ +       A   L+  + +
Sbjct: 121 TIITQHQYRKKDGALGDLVIINVYCPRAGDDNPERKSFKMRFYNLLQLRAEAMLQAGKSV 180

Query: 149 IFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDA-------------- 194
           +  GD N   +  D  +P             +     L++    +               
Sbjct: 181 VIVGDVNASHRRIDHCDPSGNWGKFESHPSRKWLDGFLKDCSCPETAETSPSSQDDLQKS 240

Query: 195 -----------------------------------IRATHD-THHLYSFWDYYADSWSKN 218
                                               R  H    + ++ W     +   N
Sbjct: 241 PQEEQELSDEERHVHDDSNIDVEDIPSKDNLFVDSFRYFHPKRENAFTCWSTLTGARQTN 300

Query: 219 KGIRIDHIMLSPEA-TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
            G RID+I+++       L    I  +  G    SDH PV  +L
Sbjct: 301 YGTRIDYIIVNERLCVDELTECDIMPEFEG----SDHCPVKATL 340


>gi|307709700|ref|ZP_07646152.1| exodeoxyribonuclease III [Streptococcus mitis SK564]
 gi|307619598|gb|EFN98722.1| exodeoxyribonuclease III [Streptococcus mitis SK564]
          Length = 275

 Score =  129 bits (323), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 61/283 (21%), Positives = 100/283 (35%), Gaps = 31/283 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + + +WN++S+ A +            +   +   N DII +QETK   K    + L+ L
Sbjct: 1   MKLISWNIDSLNAALTSDSARAKLSQEVLQTLVAENADIIAIQETKLSAKGPTKKHLEIL 60

Query: 54  -----NYHIETCGQKS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
                NY       +      Y G   L K +    ++                      
Sbjct: 61  AELFPNYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAPSTMDLEGRIITLEFD 120

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
           +           G+ +   +                  L+ E+P++  GDYN+     D 
Sbjct: 121 KFFVTQVYTPNAGDGLKRLEERQIWDVKYAEY---LAELDKEKPVLATGDYNVAHNEIDL 177

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221
            NP        FT E R  F  L   GFTD  R  H D    Y++W   +  S   N G 
Sbjct: 178 ANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHIHGDVPERYTWWAQRSKTSKINNTGW 237

Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           RID+ + S      +  +  ID+  R      DHTP+++ +++
Sbjct: 238 RIDYWLTSNRIADKVTKSDMIDSGARQ-----DHTPIVLEIEL 275


>gi|322392394|ref|ZP_08065855.1| exodeoxyribonuclease [Streptococcus peroris ATCC 700780]
 gi|321144929|gb|EFX40329.1| exodeoxyribonuclease [Streptococcus peroris ATCC 700780]
          Length = 275

 Score =  129 bits (323), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 59/283 (20%), Positives = 100/283 (35%), Gaps = 31/283 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTE---DKNFPFETL 50
           + + +WN++S+ A +           ++   +   + DII +QETK           E L
Sbjct: 1   MKLISWNIDSLNAALTSDSARAKLSQDVLQTLVAEDADIIAIQETKLSATGPTKKHLEVL 60

Query: 51  QSL--NYHIETCGQKS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
           + L   Y       +      Y G   L K +    ++                      
Sbjct: 61  EELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAPSTMDSEGRIITLEFD 120

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                       G+ +   +                  L+ ++P++  GDYN+  +  D 
Sbjct: 121 TFFVTQVYTPNAGDGLKRLEERQVWDIKYAEY---LAELDKKKPVLATGDYNVAHKEIDL 177

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221
            NP        FT E R+ F  L   GFTD  R  H D    Y++W   +  S   N G 
Sbjct: 178 ANPASNHRSPGFTDEEREGFTNLLAKGFTDTFRHVHGDVPERYTWWAQRSKTSKINNTGW 237

Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           RID+ + S      +  +  ID+ PR      DHTP+++ + +
Sbjct: 238 RIDYWLTSNRVADKVTKSDMIDSGPRQ-----DHTPIVLEIKL 275


>gi|3036809|emb|CAA18499.1| putative protein [Arabidopsis thaliana]
 gi|7270557|emb|CAB81514.1| putative protein [Arabidopsis thaliana]
          Length = 641

 Score =  129 bits (323), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 43/325 (13%), Positives = 80/325 (24%), Gaps = 47/325 (14%)

Query: 4   VTVATWNVNSIRARIHNL---AAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           + + T+NVN +R R+         +   + DIIC QETK   +    +   +  Y     
Sbjct: 1   MKIVTYNVNGLRQRVSQFDSLLKLLDSFDADIICFQETKLRRQELTADLAIADGYESFFS 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
             ++                        +                               
Sbjct: 61  CTRTSEKGRTGYSGVATFCRVKSASSSCETALPVTAEEGITGLVNSNSRGGKSETSTVAE 120

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIF-----------AGDYNIIPQPHD--CYNPI 167
             +  +K   +           +    ++F           A       + +        
Sbjct: 121 GLEEYEKEELLMIDQEGRCVITDHGHFVVFNVYGPRAVADDADRIEFKHRFYGVLERRWE 180

Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHI 226
                      V         M   +A           ++ W   + +   N G RIDHI
Sbjct: 181 CLLRQGRRVFVVGDLNIAPFAMDRCEAGPDFEKNEKDAFTCWSSSSGAEQFNYGSRIDHI 240

Query: 227 MLSPE-------------ATSLLHSARIDTK---------PRGWT-------KPSDHTPV 257
           +++                   +    I T+         P  W        K SDH PV
Sbjct: 241 LVAGSCLHQDEDKQGHSFLACHVKECDILTEYKRFKNENMPTRWKGGLVTKFKGSDHVPV 300

Query: 258 IVSL-DIPEPRKKQQDSTSQNMKPI 281
            +S  D+P+  +      +    P+
Sbjct: 301 FISFDDLPDIPEHSTPPLASRYLPM 325


>gi|322377529|ref|ZP_08052020.1| exodeoxyribonuclease III [Streptococcus sp. M334]
 gi|321281729|gb|EFX58738.1| exodeoxyribonuclease III [Streptococcus sp. M334]
          Length = 275

 Score =  129 bits (323), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 60/283 (21%), Positives = 98/283 (34%), Gaps = 31/283 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDK-------NFP 46
           + + +WN++S+ A +            +   +   N DII +QETK   K          
Sbjct: 1   MKLISWNIDSLNAALTSDSARAKLSQEVLQTLVAENADIIAIQETKLSAKGPTKKHLEIL 60

Query: 47  FETLQSLNYHIETCGQKS---YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
            E          +  + +   Y G   L K +    VT                      
Sbjct: 61  EELFPDYENTWRSSQEPARKGYAGTMFLYKKELTPTVTFPEIGAPSTMDLEGRIITLEFD 120

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
           +           G+ +   +                 +L+ E+P++  GDYN+     D 
Sbjct: 121 EFFVTQVYTPNAGDGLKRLEERQVWDVKYAEY---LAQLDKEKPVLATGDYNVAHNEIDL 177

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221
            NP        FT E R  F  L   GFTD  R  H D    Y++W   +  S   N G 
Sbjct: 178 ANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHIHGDVPERYTWWAQRSKTSKINNTGW 237

Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           RID+ + S      +  +  ID+  R      DHTP+++ +++
Sbjct: 238 RIDYWLTSNRIADKVTKSDMIDSGARQ-----DHTPIVMEIEL 275


>gi|12862077|dbj|BAB32346.1| unnamed protein product [Mus musculus]
          Length = 385

 Score =  129 bits (323), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 60/335 (17%), Positives = 105/335 (31%), Gaps = 63/335 (18%)

Query: 3   VVTVATWNVNSIRARIHNLA------------AWIKENNPDIICLQETKTEDKNF--PFE 48
           ++ V +WN+N IR+ +  LA              + E + DI+CLQETK        P  
Sbjct: 1   MLRVVSWNINGIRSPLQGLACQEPSSCPTALRRVLDELDADIVCLQETKVTRDVLTEPLA 60

Query: 49  TLQSLNYHIETCGQKS-YNGVAILSKYQPIEI---------------VTHLPGDDLDVQA 92
            ++  N +      +S Y+GVA   K     +                    G+  +   
Sbjct: 61  IVEGYNSYFSFSRSRSGYSGVATFCKDSATPVAAEEGLSGVFATLNGDIGCYGNMDEFTQ 120

Query: 93  ---------------RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF 137
                          +    T     +TL + N+Y PH +P    +   K+ + +     
Sbjct: 121 EELRVLDSEGRALLTQHKIRTLEGKEKTLTLINVYCPHADPXKPERLTFKMRFYRLLQMR 180

Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCY-----------NPIIWENDACFTLEVRQSFQKL 186
           A   L     +I  GD N   +P D                 W +               
Sbjct: 181 AEPLLAAGSHVIILGDLNTAHRPIDHCDASSLECFEXDPGRKWMDGLLSNPGDEAGPHIG 240

Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT-SLLHSARIDTKP 245
             M     +         ++ W   + +   N G R+D+++           ++ +  + 
Sbjct: 241 LFMDSYRYL--HPKQQRAFTCWSVVSGARHLNYGSRLDYVLGDRALVIDTFQASFLLPEV 298

Query: 246 RGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
            G    SDH PV   L++     KQ  +      P
Sbjct: 299 MG----SDHCPVGAVLNVSCVPAKQCPALCTRFLP 329


>gi|308162466|gb|EFO64862.1| Endonuclease/Exonuclease/phosphatase [Giardia lamblia P15]
          Length = 322

 Score =  129 bits (323), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 57/283 (20%), Positives = 106/283 (37%), Gaps = 29/283 (10%)

Query: 5   TVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL---------- 53
           T+   NVN IR+     L  +I   +PDI+C  ETK     F     +            
Sbjct: 40  TILAINVNGIRSAFSKGLKDFIYRKDPDIVCFSETKLGSSAFAAFMEKEATVDPDTGVYT 99

Query: 54  ---NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIG 109
               Y    C   +  G A  + +    +        +       E  F  ++  +  + 
Sbjct: 100 VIKGYKHVFCCSTAKQGYASTAMFVKESVPVLNLCMQMGEPEFDSEGRFLHVSLPSFELI 159

Query: 110 NLYLPHGNP----------ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159
           ++Y+P+                     +I++ K   ++    +   + +++ GD N+   
Sbjct: 160 HVYVPNSGRGSNGKTFTSKNKPANLPTRINYEKLISKYIGNLVAAGKDVVYCGDLNVAHN 219

Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMG-FTDAIRATHDTHHLYSFWDYYADSWSKN 218
             D YNP     +  FT E R +F KL +     DA RA H     YS++  +  +  + 
Sbjct: 220 EIDLYNPKGNHFNPGFTDEERNAFSKLLDGHGLIDAFRAMHPHRVKYSWFSNFGRAREQK 279

Query: 219 KGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
            G RID+ +++ +    + +  +          SDH P+I++L
Sbjct: 280 HGWRIDYFVVTHQIFRRVTTVDVLDD---HNSYSDHVPIIMTL 319


>gi|312863077|ref|ZP_07723315.1| exodeoxyribonuclease III [Streptococcus vestibularis F0396]
 gi|322516276|ref|ZP_08069206.1| exodeoxyribonuclease [Streptococcus vestibularis ATCC 49124]
 gi|311100613|gb|EFQ58818.1| exodeoxyribonuclease III [Streptococcus vestibularis F0396]
 gi|322125249|gb|EFX96622.1| exodeoxyribonuclease [Streptococcus vestibularis ATCC 49124]
          Length = 275

 Score =  129 bits (323), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 55/282 (19%), Positives = 101/282 (35%), Gaps = 29/282 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDK-------NFP 46
           + + +WN++S+ A +            +   +   N DII +QETK   K          
Sbjct: 1   MKLISWNIDSLNAALTSDSARAQLSRAVIDTLVAENADIIAIQETKLSAKGPTKKHLQIL 60

Query: 47  FETLQSL--NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
            +        +       +      +    + +  +   P               T+   
Sbjct: 61  EDYFPDYVNTWRSSVEPARKGYAGTMFLYKKELTPIITYPEIGAPSTMDCEGRIITLEFA 120

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
              +  +Y P+         + +I            +L+ ++P++  GDYN+  +  D  
Sbjct: 121 NFFVTQVYTPNAGDGLKRLLERQIWD--EKYADYLAKLDAQKPVLATGDYNVAHKEIDLA 178

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIR 222
           NP        FT E R  F  L   GFTD  R  + D    Y++W   +  S   N G R
Sbjct: 179 NPSSNRRSPGFTDEERAGFTNLLAKGFTDTYRHLNGDVTGAYTWWAQRSKTSKINNTGWR 238

Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           ID+ + S      +  +  I++  R      DHTP+++ +D+
Sbjct: 239 IDYWLTSNRIADKVTKSDMINSGDRQ-----DHTPIVLEIDL 275


>gi|306827920|ref|ZP_07461187.1| exodeoxyribonuclease III [Streptococcus pyogenes ATCC 10782]
 gi|304429839|gb|EFM32881.1| exodeoxyribonuclease III [Streptococcus pyogenes ATCC 10782]
          Length = 275

 Score =  129 bits (323), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 59/283 (20%), Positives = 101/283 (35%), Gaps = 31/283 (10%)

Query: 4   VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + + +WN++S+ A +            +   +   + DII +QETK   K    + +++L
Sbjct: 1   MKLISWNIDSLNAALTGESPRALLSRAVLDTLVAQDADIIAIQETKLSAKGPTKKHIETL 60

Query: 54  -NYHIETCGQKSYN---------GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
            +Y          +         G   L K     ++T                      
Sbjct: 61  LSYFPNYLHVWRSSVEPARKGYAGTMFLYKSTLNPVITFPEIGAPTTMDAEGRIITLEFE 120

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                       G+ +                      L+ ++P++  GDYN+  +  D 
Sbjct: 121 DFFVTQVYTPNAGDGLRRLDDRQIWDHKYADY---LTELDTQKPVLATGDYNVAHKEIDL 177

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221
            NP        FT E RQ F  L   GFTD  R  H D  H+Y++W   +  S   N G 
Sbjct: 178 ANPSSNRRSPGFTDEERQGFTNLLARGFTDTFRHLHGDIPHVYTWWAQRSKTSKINNTGW 237

Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           RID+ + S      +  +  I +  R      DHTP+++ +D+
Sbjct: 238 RIDYWLASNRIVDKVKRSEMISSGERQ-----DHTPILLDIDL 275


>gi|329116616|ref|ZP_08245333.1| exodeoxyribonuclease III [Streptococcus parauberis NCFD 2020]
 gi|326907021|gb|EGE53935.1| exodeoxyribonuclease III [Streptococcus parauberis NCFD 2020]
          Length = 275

 Score =  128 bits (322), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 60/283 (21%), Positives = 101/283 (35%), Gaps = 31/283 (10%)

Query: 4   VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + + +WN++S+ A +            +   +   + DII +QETK        + ++S+
Sbjct: 1   MKLISWNIDSLNAALTGESPRALLSRAVIDTLVAQDADIIAIQETKLSATGPTKKHIESI 60

Query: 54  N-YHIETCGQKSYN---------GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
             Y  E       +         G   L K     IVT                      
Sbjct: 61  ESYFPEYVHVWRSSVEPARKGYAGTMFLYKKSLNPIVTFPEIGAPTTMDAEGRIITLEFD 120

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                       G+ +                     +L+ ++P++  GDYN+     D 
Sbjct: 121 DCFVTQVYTPNAGDGLKRLTDRQLWDIKYAEY---LAQLDAQKPVLATGDYNVAHNEIDL 177

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221
            NP      A FT E R  F  L   GFTD  R  H D  ++Y++W   +  S   N G 
Sbjct: 178 ANPASNRRSAGFTDEERAGFTMLLGHGFTDTFRHIHGDIPNVYTWWAQRSKTSKINNTGW 237

Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           RID+ + S      +  +  I++  R      DHTP+++ +D+
Sbjct: 238 RIDYWLTSNRVADKVLKSEMINSGARQ-----DHTPILLEIDL 275


>gi|306834074|ref|ZP_07467194.1| exodeoxyribonuclease III [Streptococcus bovis ATCC 700338]
 gi|304423647|gb|EFM26793.1| exodeoxyribonuclease III [Streptococcus bovis ATCC 700338]
          Length = 275

 Score =  128 bits (322), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 57/282 (20%), Positives = 98/282 (34%), Gaps = 29/282 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDK-------NFP 46
           + + +WN++S+ A +            +   +   N DII +QETK   K          
Sbjct: 1   MKLISWNIDSLNAALTSDSARAVMSRAVIDTLVTENADIIAIQETKLSAKGPTKKHLQIL 60

Query: 47  FETLQSLN--YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
            +        +       +      +      +      P               T+   
Sbjct: 61  QDYFPEYEVSWRSSVEPARKGYAGTMFLYKSSLTPSISYPEIGAPDTMDSEGRIITLEFD 120

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
              +  +Y P+         + +I             L+  +P++  GDYN+  +  D  
Sbjct: 121 KFFVTQVYTPNAGDGLKRLAERQIWD--EKYADYLTELDQVKPVLATGDYNVAHKEIDLA 178

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIR 222
           +P        FT E R  F  L   GFTD  R  H D   +YS+W   +  S   N G R
Sbjct: 179 HPSSNRRSPGFTDEERAGFTNLLAKGFTDTFRYIHGDIPDVYSWWAQRSKTSKINNSGWR 238

Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           ID+ + S      +  +  ID+  R      DHTP+++ +D+
Sbjct: 239 IDYWLTSSRIADKITKSEMIDSGARQ-----DHTPIVLEIDL 275


>gi|257066091|ref|YP_003152347.1| exodeoxyribonuclease III Xth [Anaerococcus prevotii DSM 20548]
 gi|256797971|gb|ACV28626.1| exodeoxyribonuclease III Xth [Anaerococcus prevotii DSM 20548]
          Length = 274

 Score =  128 bits (322), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 58/282 (20%), Positives = 102/282 (36%), Gaps = 31/282 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTED--------KNF 45
           +   +WN++S+ A +           ++   IK  NPD+I LQETK           +  
Sbjct: 1   MKFISWNIDSLNAALTSDSKRAVMSRDVLLTIKNENPDVIALQETKLPANGPSKKHVEKL 60

Query: 46  PFETLQSLNYHIETCGQ--KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
             E     +Y   +     +      +    + +++    P               T+  
Sbjct: 61  -SEFFPDYDYVWISSRPGARKSYAGTMTLYKKGLDVKESFPEIGAPDTMDLEGRILTLEF 119

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
           +      +Y P+                 +        L+  +P+I  GD+N+  +  D 
Sbjct: 120 EDFYFTQVYTPNAGGELKRL--PLREEWDKLYADYLAELDKNKPVIATGDFNVAHEEIDL 177

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYAD-SWSKNKGI 221
            +P      A FT E R+ F  L N GFTD  R  +      Y++W      S   N G 
Sbjct: 178 AHPENNHMSAGFTDEERRGFTNLLNRGFTDTFRHLNKNLEGAYTWWAQRVKTSKINNSGW 237

Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLD 262
           RID+ ++S      +  +  ID+  R      DHTP+++ + 
Sbjct: 238 RIDYFLVSDRLMEDVIDSTIIDSGDRQ-----DHTPIMLEIK 274


>gi|315613690|ref|ZP_07888597.1| exodeoxyribonuclease III [Streptococcus sanguinis ATCC 49296]
 gi|315314381|gb|EFU62426.1| exodeoxyribonuclease III [Streptococcus sanguinis ATCC 49296]
          Length = 296

 Score =  128 bits (322), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 60/283 (21%), Positives = 100/283 (35%), Gaps = 31/283 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + + +WN++S+ A +            +   +   N DII +QETK   K    + L+ L
Sbjct: 22  MKLISWNIDSLNAALTSDSARAKLSQEVLQTLVAENADIIAIQETKLSAKGPTKKHLEIL 81

Query: 54  -----NYHIETCGQKS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
                 Y       +      Y G   L K +    ++                      
Sbjct: 82  EELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAPSTMDLEGRIITLEFD 141

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                       G+ +   +                 +L+ E+P++  GDYN+  +  D 
Sbjct: 142 TFFVTQVYTPNAGDGLKRLEERQVWDVKYAEY---LAQLDKEKPVLATGDYNVAHKEIDL 198

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221
            NP        FT E R  F  L   GFTD  R  H D    Y++W   +  S   N G 
Sbjct: 199 ANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHIHGDVPERYTWWAQRSKTSKINNTGW 258

Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           RID+ + S      +  +  ID+  R      DHTP+++ +++
Sbjct: 259 RIDYWLTSNRVAEKVTKSDMIDSGARQ-----DHTPIVLEIEL 296


>gi|28896473|ref|NP_802823.1| 3'-exo-deoxyribonuclease [Streptococcus pyogenes SSI-1]
 gi|28811724|dbj|BAC64656.1| putative 3'-exo-deoxyribonuclease [Streptococcus pyogenes SSI-1]
          Length = 313

 Score =  128 bits (322), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 59/283 (20%), Positives = 101/283 (35%), Gaps = 31/283 (10%)

Query: 4   VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + + +WN++S+ A +            +   +   + DII +QETK   K    + +++L
Sbjct: 39  MKLISWNIDSLNAALTGESPRALLSRAVLDTLVAQDADIIAIQETKLSAKGPTKKHIEAL 98

Query: 54  -NYHIETCGQKSYN---------GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
            +Y          +         G   L K     ++T                      
Sbjct: 99  LSYFPNYLHVWRSSVEPARKGYAGTMFLYKNTLNPVITFPEIGAPTTMDAEGRIITLEFE 158

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                       G+ +                      L+ ++P++  GDYN+  +  D 
Sbjct: 159 DFFVTQVYTPNAGDGLRRLDDRQIWDHKYADY---LTELDAQKPVLATGDYNVAHKEIDL 215

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221
            NP        FT E RQ F  L   GFTD  R  H D  H+Y++W   +  S   N G 
Sbjct: 216 ANPSSNRRSPGFTDEERQGFTNLLARGFTDTFRHVHGDIPHVYTWWAQRSKTSKINNTGW 275

Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           RID+ + S      +  +  I +  R      DHTP+++ +D+
Sbjct: 276 RIDYWLASNRIVDKVKRSEMISSGERQ-----DHTPILLDIDL 313


>gi|316977461|gb|EFV60557.1| DNA-(apurinic or apyrimidinic site) lyase 2 [Trichinella spiralis]
          Length = 462

 Score =  128 bits (322), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 49/292 (16%), Positives = 97/292 (33%), Gaps = 39/292 (13%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + TWNVN +R+ +  +   +     DIICLQETK               +       +
Sbjct: 1   MKITTWNVNGLRSIVD-IQKTLLSLGCDIICLQETKLTYDTLDSSLALIDGFDSYFAFCQ 59

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ------------------- 104
           +  G + ++ Y   +    L  ++     R  +                           
Sbjct: 60  TRRGYSGVATYCKSDFSPDLVFNNFHDLYRQFQFAHPNRQHLGIFDNFDTLDNEGRMLAT 119

Query: 105 -----------TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGD 153
                       L I N+Y P  +P    + + +++++K         L     ++  GD
Sbjct: 120 RHKLTNCNNAEYLFILNIYCPRVDPEQMDRQNFRLAFLKLLQHCTECLLNSGNYVLILGD 179

Query: 154 YNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQ---NMGFTDAIRATHDTHHL-YSFWD 209
            N+  +  D  +P    +     + + +         +    D  R  +      ++ W+
Sbjct: 180 MNLCHKRIDHCDPDQEFDTDEARIWLCEFLYDTDKNADGKMVDLYRIHYPNKGRMFTCWN 239

Query: 210 YYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
               +   N G RID+I+ + +         I +  +G    SDH PV+  L
Sbjct: 240 SQKRARILNFGTRIDYILANVDLIDRCSCCEILSSIQG----SDHCPVMAEL 287


>gi|288905926|ref|YP_003431148.1| 3'-exo-deoxyribonuclease [Streptococcus gallolyticus UCN34]
 gi|306831945|ref|ZP_07465100.1| exodeoxyribonuclease III [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325978892|ref|YP_004288608.1| exodeoxyribonuclease III [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|288732652|emb|CBI14224.1| putative 3'-exo-deoxyribonuclease [Streptococcus gallolyticus
           UCN34]
 gi|304425871|gb|EFM28988.1| exodeoxyribonuclease III [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|325178820|emb|CBZ48864.1| exodeoxyribonuclease III [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 275

 Score =  128 bits (322), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 57/282 (20%), Positives = 98/282 (34%), Gaps = 29/282 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDK-------NFP 46
           + + +WN++S+ A +            +   +   N DII +QETK   K          
Sbjct: 1   MKLISWNIDSLNAALTSDSARAVMSRAVIDTLVTENADIIAIQETKLSAKGPTKKHLQIL 60

Query: 47  FETLQSLN--YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
            +        +       +      +      +      P               T+   
Sbjct: 61  QDYFPEYEVSWRSSVEPARKGYAGTMFLYKSSLTPSISYPEIGAPDTMDSEGRIITLEFD 120

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
              +  +Y P+         + +I             L+  +P++  GDYN+  +  D  
Sbjct: 121 KFFVTQVYTPNAGDGLKRLAERQIWD--EKYADYLAELDQVKPVLATGDYNVAHKEIDLA 178

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIR 222
           +P        FT E R  F  L   GFTD  R  H D   +YS+W   +  S   N G R
Sbjct: 179 HPSSNRRSPGFTDEERAGFTNLLAKGFTDTFRYIHGDIPDVYSWWAQRSKTSKINNSGWR 238

Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           ID+ + S      +  +  ID+  R      DHTP+++ +D+
Sbjct: 239 IDYWLTSSRIADKITKSEMIDSGARQ-----DHTPIVLEIDL 275


>gi|330719278|ref|ZP_08313878.1| exonuclease III [Leuconostoc fallax KCTC 3537]
          Length = 271

 Score =  128 bits (322), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 70/278 (25%), Positives = 114/278 (41%), Gaps = 26/278 (9%)

Query: 4   VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           +   +WN++SI A + +          +   I E  PD++ +QETK +      + L +L
Sbjct: 1   MKFISWNIDSINAAVEHKSNRGEMTWAVLNEISEIAPDVLSIQETKLKASGLTKKQLATL 60

Query: 54  N-----YHIETCGQKSYNGVAILSKYQPI-EIVTHLPGDDLDVQARFIEATFTINTQTLR 107
           N     YHI        +G +       +  +   +P  D   +        T+      
Sbjct: 61  NSLFPDYHIFVNPSTGRSGYSGTMMLSKVAPLNIDMPKIDAPGEMDLEGRIITLEFPEFY 120

Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167
           +  +Y P+     +   D          R   Q L+ ++P+IF+GD+N+  Q  D  NP 
Sbjct: 121 VSTVYTPNSGSQLARLNDRG--AWDDAYRHYIQSLDQQKPVIFSGDFNVAHQEIDLKNPK 178

Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYAD-SWSKNKGIRIDH 225
              + A FT E R+ F  L + GFTD  R    T    Y++W   +  S   N G RID+
Sbjct: 179 SNRHSAGFTPEEREKFTNLLDSGFTDTFRYFEPTLTGAYTWWAQISKTSKINNSGWRIDY 238

Query: 226 IMLSPEATSLLHSARI-DTKPRGWTKPSDHTPVIVSLD 262
            + S      L +  I DT  R      DH P+++ +D
Sbjct: 239 YLTSERLNERLKAHHILDTGARQ-----DHAPIMLEID 271


>gi|270293121|ref|ZP_06199332.1| exodeoxyribonuclease [Streptococcus sp. M143]
 gi|270279100|gb|EFA24946.1| exodeoxyribonuclease [Streptococcus sp. M143]
          Length = 275

 Score =  128 bits (321), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 63/283 (22%), Positives = 100/283 (35%), Gaps = 31/283 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + + +WN++S+ A +            +   +   N DII +QETK   K    + L+ L
Sbjct: 1   MKLISWNIDSLNAALTSDSTRAKLSQEVLQTLVAENADIIAIQETKLSAKGPTKKHLEIL 60

Query: 54  -----NYHIETCGQKS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
                NY       +      Y G   L K +    VT                      
Sbjct: 61  AELFPNYENTWRSSQEPARKGYAGTMFLYKKELTPTVTFPEIGAPSTMDLEGRIITLEFD 120

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
           +           G+ +   +                  L+ E+P++  GDYN+     D 
Sbjct: 121 EFFVTQVYTPNAGDGLKRLEERQVWDVKYAEY---LAELDKEKPVLATGDYNVAHNEIDL 177

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221
            NP        FT E R  F  L   GFTD  R  H D    Y++W   +  S   N G 
Sbjct: 178 ANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHVHGDVPERYTWWAQRSKTSKINNTGW 237

Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           RID+ + S      +  +  ID+  R      DHTP+++ +++
Sbjct: 238 RIDYWLTSNRVADKVTKSDMIDSGARQ-----DHTPIVMEIEL 275


>gi|73921677|sp|Q68G58|APEX2_MOUSE RecName: Full=DNA-(apurinic or apyrimidinic site) lyase 2; AltName:
           Full=APEX nuclease 2; AltName:
           Full=Apurinic-apyrimidinic endonuclease 2; Short=AP
           endonuclease 2
 gi|51259055|gb|AAH78633.1| Apurinic/apyrimidinic endonuclease 2 [Mus musculus]
          Length = 516

 Score =  128 bits (321), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 60/335 (17%), Positives = 105/335 (31%), Gaps = 63/335 (18%)

Query: 3   VVTVATWNVNSIRARIHNLA------------AWIKENNPDIICLQETKTEDKNF--PFE 48
           ++ V +WN+N IR+ +  LA              + E + DI+CLQETK        P  
Sbjct: 1   MLRVVSWNINGIRSPLQGLACQEPSSCPTALRRVLDELDADIVCLQETKVTRDVLTEPLA 60

Query: 49  TLQSLNYHIETCGQKS-YNGVAILSKYQPIEI---------------VTHLPGDDLDVQA 92
            ++  N +      +S Y+GVA   K     +                    G+  +   
Sbjct: 61  IVEGYNSYFSFSRSRSGYSGVATFCKDSATPVAAEEGLSGVFATLNGDIGCYGNMDEFTQ 120

Query: 93  ---------------RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF 137
                          +    T     +TL + N+Y PH +P    +   K+ + +     
Sbjct: 121 EELRVLDSEGRALLTQHKIRTLEGKEKTLTLINVYCPHADPGKPERLTFKMRFYRLLQMR 180

Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCY-----------NPIIWENDACFTLEVRQSFQKL 186
           A   L     +I  GD N   +P D                 W +               
Sbjct: 181 AEALLAAGSHVIILGDLNTAHRPIDHCDASSLECFEEDPGRKWMDGLLSNPGDEAGPHIG 240

Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT-SLLHSARIDTKP 245
             M     +         ++ W   + +   N G R+D+++           ++ +  + 
Sbjct: 241 LFMDSYRYL--HPKQQRAFTCWSVVSGARHLNYGSRLDYVLGDRALVIDTFQASFLLPEV 298

Query: 246 RGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
            G    SDH PV   L++     KQ  +      P
Sbjct: 299 MG----SDHCPVGAVLNVSCVPAKQCPALCTRFLP 329


>gi|21541818|ref|NP_084219.1| DNA-(apurinic or apyrimidinic site) lyase 2 [Mus musculus]
 gi|19912820|dbj|BAB88654.1| apurinic/apyrimidinic endonuclease 2 [Mus musculus]
 gi|22830557|dbj|BAC11807.1| apurinic/apyrimidinic endonuclease 2 [Mus musculus]
 gi|26341548|dbj|BAC34436.1| unnamed protein product [Mus musculus]
 gi|123223479|emb|CAM21421.1| apurinic/apyrimidinic endonuclease 2 [Mus musculus]
 gi|148675566|gb|EDL07513.1| apurinic/apyrimidinic endonuclease 2, isoform CRA_a [Mus musculus]
          Length = 516

 Score =  128 bits (321), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 60/335 (17%), Positives = 105/335 (31%), Gaps = 63/335 (18%)

Query: 3   VVTVATWNVNSIRARIHNLA------------AWIKENNPDIICLQETKTEDKNF--PFE 48
           ++ V +WN+N IR+ +  LA              + E + DI+CLQETK        P  
Sbjct: 1   MLRVVSWNINGIRSPLQGLACQEPSSCPTALRRVLDELDADIVCLQETKVTRDVLTEPLA 60

Query: 49  TLQSLNYHIETCGQKS-YNGVAILSKYQPIEI---------------VTHLPGDDLDVQA 92
            ++  N +      +S Y+GVA   K     +                    G+  +   
Sbjct: 61  IVEGYNSYFSFSRSRSGYSGVATFCKDSATPVAAEEGLSGVFATLNGDIGCYGNMDEFTQ 120

Query: 93  ---------------RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF 137
                          +    T     +TL + N+Y PH +P    +   K+ + +     
Sbjct: 121 EELRVLDSEGRALLTQHKIRTLEGKEKTLTLINVYCPHADPGKPERLTFKMRFYRLLQMR 180

Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCY-----------NPIIWENDACFTLEVRQSFQKL 186
           A   L     +I  GD N   +P D                 W +               
Sbjct: 181 AEALLAAGSHVIILGDLNTAHRPIDHCDASSLECFEEDPGRKWMDGLLSNPGDEAGPHIG 240

Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT-SLLHSARIDTKP 245
             M     +         ++ W   + +   N G R+D+++           ++ +  + 
Sbjct: 241 LFMDSYRYL--HPKQQRAFTCWSVVSGARHLNYGSRLDYVLGDRALVIDTFQASFLLPEV 298

Query: 246 RGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
            G    SDH PV   L++     KQ  +      P
Sbjct: 299 MG----SDHCPVGAVLNVSCVPAKQCPALCTRFLP 329


>gi|146320518|ref|YP_001200229.1| putative 3'-exo-deoxyribonuclease [Streptococcus suis 98HAH33]
 gi|145691324|gb|ABP91829.1| putative 3'-exo-deoxyribonuclease [Streptococcus suis 98HAH33]
          Length = 276

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 61/281 (21%), Positives = 107/281 (38%), Gaps = 30/281 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + + +WN++S+ A +            +   +   + DII +QETK  DK    + L+ L
Sbjct: 1   MKLISWNIDSLNAALTAESPRALLSRAVIDTLVTEDADIIAIQETKLSDKGPTKKHLEIL 60

Query: 54  NYHIETCGQ----------KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
             +     Q          ++     +      +      P               T+  
Sbjct: 61  ESYFPGICQGPGRSSVEPARTCYAGTLFLYKNHLTPTITFPEIGAPTTMDSEGRIITLEF 120

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
               +  +Y P+         D +I  ++        +L+  +P++  GDYN+  +  D 
Sbjct: 121 DDFYVTQVYTPNAGDGLKRLADRQIWDVQ--YADYLAKLDSHKPVLATGDYNVAHKEIDL 178

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221
            NP        FT E RQ F  L   GFTD  R  H D  + Y++W   +  S   N G 
Sbjct: 179 ANPASNRQSPGFTDEERQGFTNLLAKGFTDTFRHLHGDVLNAYTWWAQRSRTSKINNTGW 238

Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSL 261
           RID+ ++S      +  +  ID+  R      DHTP+++ +
Sbjct: 239 RIDYWLVSDRIADKVSKSDMIDSGARQ-----DHTPIVMEI 274


>gi|256847688|ref|ZP_05553133.1| exodeoxyribonuclease III [Lactobacillus coleohominis 101-4-CHN]
 gi|256715377|gb|EEU30353.1| exodeoxyribonuclease III [Lactobacillus coleohominis 101-4-CHN]
          Length = 275

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 66/282 (23%), Positives = 109/282 (38%), Gaps = 29/282 (10%)

Query: 4   VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           +   +WN++SI A +            +   I +  PD+I +QETK        +    L
Sbjct: 1   MKFISWNIDSINAALTGTSTRAGETRDVLHKIADLVPDVIAIQETKLSKNGPTKKHFTVL 60

Query: 54  N-----YHIETC----GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
           N     Y +         +      +      +      P               T+   
Sbjct: 61  NELFPDYQVAWRSSVEPARKGYAGTMYLYRTGLTPKISYPQIGAPEPMDNEGRMITLEFP 120

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
              +  +Y P+         + +I       R   Q+L+ ++P+I +GD+N+  +P D  
Sbjct: 121 YFFVTEVYTPNSGTGLRRLAERQIWD--DRYREYLQQLDQQKPVIASGDFNVAHEPIDLA 178

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYY-ADSWSKNKGIR 222
           +P    + A FT E R+ F KL   GFTD+ R  H      YS+W      S   N G R
Sbjct: 179 HPENNHHSAGFTDEEREHFTKLLKAGFTDSFRHLHPEEKGAYSWWAQRVITSKQNNSGWR 238

Query: 223 IDHIMLSPEATSL-LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           ID+ ++S       + S+ IDT  R      DHTP+ + +D+
Sbjct: 239 IDYWLVSDRIADKVVKSSMIDTGARR-----DHTPIELDIDL 275


>gi|313106759|ref|ZP_07792975.1| catabolite repression control protein [Pseudomonas aeruginosa
           39016]
 gi|310879477|gb|EFQ38071.1| catabolite repression control protein [Pseudomonas aeruginosa
           39016]
          Length = 254

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 60/258 (23%), Positives = 105/258 (40%), Gaps = 13/258 (5%)

Query: 10  NVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ--KSYN 66
           NVN I+A     L +W++  N D+ICLQ+T+    +    + Q   Y +  C        
Sbjct: 2   NVNGIQAAAERGLLSWLQAQNADVICLQDTRASAFDLDDPSFQLDGYFLYACDAELPEQG 61

Query: 67  GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDD 126
           GVA+ S+ QP  +++ L  +  D   R+++A F   +         L           + 
Sbjct: 62  GVALYSRLQPKAVISGLGFETADRYGRYLQADFDKVS-----IATLLLPSGQSGDESLNQ 116

Query: 127 KISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI-IWENDACFTLEVRQSFQK 185
           K  ++  F  + S++       I+ G   +  Q  D  N     +       E     + 
Sbjct: 117 KFKFMDDFTHYLSKQRRKRREYIYCGSLYVAHQKMDVKNWRECQQMPGFLAPERAWLDEV 176

Query: 186 LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKP 245
             N+G+ DA+R        +S+W     +   N G R D+ +L+P     + +A++  +P
Sbjct: 177 FGNLGYADALREVSREGDQFSWWPDSEQAEMLNLGWRFDYQVLTPGLRRFVRNAKLPRQP 236

Query: 246 RGWTKPSDHTPVIVSLDI 263
           R     S H P+IV  D 
Sbjct: 237 R----FSQHAPLIVDYDW 250


>gi|300215075|gb|ADJ79491.1| Exodeoxyribonuclease III [Lactobacillus salivarius CECT 5713]
          Length = 275

 Score =  127 bits (320), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 62/285 (21%), Positives = 108/285 (37%), Gaps = 35/285 (12%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTED----------- 42
           + + +WN++S+ A +            + A I + NPDII +QETK              
Sbjct: 1   MKLISWNIDSLNAALTSDSARAKQSREVLATIIDENPDIIAIQETKLSATGPTKKHQTIL 60

Query: 43  -KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI 101
            + FP   +    +       +      +      +      P  D            T+
Sbjct: 61  AEQFPDYEIA---WRSSQEPARKGYAGTMFLYKNNLNPTISYPEIDAPEPMDSEGRIITL 117

Query: 102 NTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161
                 +  +Y P+         + ++             L+  +PL+ +GD+N+  +  
Sbjct: 118 EFDNFYVTQVYTPNAGDGLRRLAERQVWD--EKYADYLVSLDQNKPLLSSGDFNVAHKEI 175

Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNK 219
           D  +P    + A FT E R  F  L N GFTD  R  H D   +YS+W   +  S   N 
Sbjct: 176 DLAHPGNNHHSAGFTDEERAGFTNLLNKGFTDTFRYVHGDVKDVYSWWAQRSRTSKINNS 235

Query: 220 GIRIDHIMLSPEATSLLHSARI-DTKPRGWTKPSDHTPVIVSLDI 263
           G RID+ + S      +  + + D+  R      DHTP+++ ++I
Sbjct: 236 GWRIDYWLASNRIADKIVRSEMLDSGERR-----DHTPIVLEINI 275


>gi|327474597|gb|EGF20002.1| exodeoxyribonuclease [Streptococcus sanguinis SK408]
 gi|328946601|gb|EGG40739.1| exodeoxyribonuclease [Streptococcus sanguinis SK1087]
          Length = 275

 Score =  127 bits (320), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 60/283 (21%), Positives = 100/283 (35%), Gaps = 31/283 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + + +WN++S+ A +            +   ++  N DII +QETK        + L+ L
Sbjct: 1   MKLISWNIDSLNAALTSDSARAQLSQAVLQTLQAENADIIAIQETKLSATGPTKKHLEIL 60

Query: 54  -----NYHIETCGQKS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
                +Y       +      Y G   L K +    VT                      
Sbjct: 61  TNLFPDYENTWRSSQEPARKGYAGTMFLYKKELTPTVTFPEIGAPSTMDVEGRIITLEFD 120

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                       G+ +      +               L+ ++P++  GDYN+  +  D 
Sbjct: 121 DFFVTQVYTPNAGDGLKRL---EDRQVWDAKYAEYLATLDGQKPVLATGDYNVAHKEIDL 177

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221
            NP        FT E R  F  L   GFTD  R  H D    Y++W   +  S   N G 
Sbjct: 178 ANPASNRRSPGFTDEERAGFTNLLAKGFTDTFRHLHGDIPDQYTWWAQRSKTSKINNTGW 237

Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           RID+ + S      +  +  ID+  R      DHTP+++ +++
Sbjct: 238 RIDYWLTSNRVADKVTKSDMIDSGARQ-----DHTPIVMEIEL 275


>gi|227530634|ref|ZP_03960683.1| exodeoxyribonuclease III [Lactobacillus vaginalis ATCC 49540]
 gi|227349415|gb|EEJ39706.1| exodeoxyribonuclease III [Lactobacillus vaginalis ATCC 49540]
          Length = 275

 Score =  127 bits (320), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 64/283 (22%), Positives = 109/283 (38%), Gaps = 31/283 (10%)

Query: 4   VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + + +WN++SI A +            +   I   +PD+I +QETK        + L  L
Sbjct: 1   MKLISWNIDSINAALTGTSTRAEETRSVLHKIAGKHPDVIAIQETKLSKNGPTKKHLAVL 60

Query: 54  -----NYHIETCG-----QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
                +Y +         +K Y G   L   +    VT+      +              
Sbjct: 61  QELFPDYQVAWRSSVEPARKGYAGTMYLYLKEYEPTVTYPQIGAPETMDDEGRIITLEFP 120

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                       G+ +                R   Q+L+ ++P+I +GD+N+  +  D 
Sbjct: 121 DFFVTEVYTPNSGSGLKRLA---DRQVWDDCYREYLQKLDQQKPVIASGDFNVAHESIDL 177

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYY-ADSWSKNKGI 221
            +P    + A FT E R+ F KL   GFTD+ R  +      YS+W      S   N G 
Sbjct: 178 AHPENNHHSAGFTDEEREHFTKLLAAGFTDSFRHLNPEKTGAYSWWAQRVITSKQNNSGW 237

Query: 222 RIDHIMLSPEATSLLHSA-RIDTKPRGWTKPSDHTPVIVSLDI 263
           RID+ ++S      + ++  ID+  R      DHTP+ + +D+
Sbjct: 238 RIDYWLVSDRLADKIKNSTMIDSGERR-----DHTPIELDIDL 275


>gi|90962461|ref|YP_536377.1| exodeoxyribonuclease III [Lactobacillus salivarius UCC118]
 gi|301299216|ref|ZP_07205503.1| exodeoxyribonuclease III [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|90821655|gb|ABE00294.1| Exodeoxyribonuclease III [Lactobacillus salivarius UCC118]
 gi|300853176|gb|EFK80773.1| exodeoxyribonuclease III [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 275

 Score =  127 bits (320), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 62/285 (21%), Positives = 109/285 (38%), Gaps = 35/285 (12%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTED----------- 42
           + + +WN++S+ A +            + A I + NPDII +QETK              
Sbjct: 1   MKLISWNIDSLNAALTSDSARAKQSREVLATIIDENPDIIAIQETKLSATGPTKKHQTIL 60

Query: 43  -KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI 101
            + FP   +    +       +      +      +      P  D            T+
Sbjct: 61  AEQFPDYEIA---WRSSQEPARKGYAGTMFLYKNNLNPTISYPEIDAPEPMDSEGRIITL 117

Query: 102 NTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161
              +  +  +Y P+         + ++             L+  +PL+ +GD+N+  +  
Sbjct: 118 EFDSFYVTQVYTPNAGDGLRRLAERQVWD--EKYADYLVSLDQNKPLLSSGDFNVAHKEI 175

Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNK 219
           D  +P    + A FT E R  F  L N GFTD  R  H D   +YS+W   +  S   N 
Sbjct: 176 DLAHPGNNHHSAGFTDEERAGFTNLLNKGFTDTFRYVHGDVKDVYSWWAQRSRTSKINNS 235

Query: 220 GIRIDHIMLSPEATSLLHSARI-DTKPRGWTKPSDHTPVIVSLDI 263
           G RID+ + S      +  + + D+  R      DHTP+++ ++I
Sbjct: 236 GWRIDYWLASNRIADKIVRSEMLDSGERR-----DHTPIVLEINI 275


>gi|326517565|dbj|BAK03701.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 296

 Score =  127 bits (320), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 67/270 (24%), Positives = 117/270 (43%), Gaps = 23/270 (8%)

Query: 4   VTVATWNVNSIRARIH--NLAAWIK-ENNPDIICLQETKTEDKNFPFETLQ------SLN 54
           + + +WNVN +   +     ++ +    N D++CLQET  ++ +   +  +        N
Sbjct: 40  MKILSWNVNGLSNIVQSGGFSSALAQRENFDVLCLQETHLKEGDV--KDFKNLIPGYEYN 97

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           Y   +  +  Y+G  ++S+ +PI +   +   + D + R I   F        + N Y+P
Sbjct: 98  YWSCSVARLDYSGTGVISRVKPISVQYGIGIAEHDQEGRVITLEFE----NFYLVNAYVP 153

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
           +       +   ++           ++LE  +P+I AGD N   Q  D +NP     DA 
Sbjct: 154 NSG-RGLRRLVYRVDNWDPSFSDFVEKLESFKPVIVAGDLNCARQSIDIHNPAAKTEDAG 212

Query: 175 FTLEVRQSFQKLQNMG-FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
           FT E R+SFQ   +M  F D  R  H     Y+FW    +    NKG R+D+ + S    
Sbjct: 213 FTEEERESFQINFDMRGFVDTFRKQHPKAVGYTFWG--ENQRCNNKGWRLDYFLASGSII 270

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             +H + I          SDH+P+ + L +
Sbjct: 271 DRVHDSYILPDVTS----SDHSPIGLVLKL 296


>gi|323351082|ref|ZP_08086739.1| exodeoxyribonuclease [Streptococcus sanguinis VMC66]
 gi|322122806|gb|EFX94515.1| exodeoxyribonuclease [Streptococcus sanguinis VMC66]
 gi|325687044|gb|EGD29067.1| exodeoxyribonuclease [Streptococcus sanguinis SK72]
          Length = 275

 Score =  127 bits (320), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 59/283 (20%), Positives = 100/283 (35%), Gaps = 31/283 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + + +WN++S+ A +            +   ++  N D+I +QETK        + L+ L
Sbjct: 1   MKLISWNIDSLNAALTSDSARAQLSQAVLQTLQAENADVIAIQETKLSASGPTKKHLEIL 60

Query: 54  -----NYHIETCGQKS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
                +Y       +      Y G   L K +    VT                      
Sbjct: 61  TNLFPDYENTWRSSQEPARKGYAGTMFLYKKELTPTVTFPEIGAPSTMDVEGRIITLEFD 120

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                       G+ +                      L+ ++P++  GDYN+  +  D 
Sbjct: 121 GFFVTQVYTPNAGDGLKRLD---DRQVWDAKYAEYLATLDEQKPVLATGDYNVAHKEIDL 177

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221
            NP        FT E R  F  L   GFTD  R  H D  + Y++W   +  S   N G 
Sbjct: 178 ANPASNRRSPGFTDEERAGFTNLLAKGFTDTFRHLHGDIPNQYTWWAQRSKTSKINNTGW 237

Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           RID+ + S      +  +  ID+  R      DHTP+++ +++
Sbjct: 238 RIDYWLTSNRVADKVTKSDMIDSGARQ-----DHTPIVMEIEL 275


>gi|307705505|ref|ZP_07642359.1| exodeoxyribonuclease III [Streptococcus mitis SK597]
 gi|307620963|gb|EFO00046.1| exodeoxyribonuclease III [Streptococcus mitis SK597]
          Length = 275

 Score =  127 bits (320), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 61/283 (21%), Positives = 99/283 (34%), Gaps = 31/283 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + + +WN++S+ A +            +   +   N DII +QETK   K    + L+ L
Sbjct: 1   MKLISWNIDSLNAALTSDSARAKLSQEVLQTLVAENADIIAIQETKLSAKGPTKKHLEIL 60

Query: 54  -----NYHIETCGQKS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
                 Y       +      Y G   L K +    VT                      
Sbjct: 61  EELFPGYANTWRSSQEPARKGYAGTMFLYKKELSPTVTFPEIGAPSTMDLEGRIITLEFD 120

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
           +           G+ +   +                  L+ ++P++  GDYN+     D 
Sbjct: 121 KFFVTQVYTPNAGDGLKRLEERQVWDVKYAEY---LAELDKQKPVLATGDYNVAHNEIDL 177

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221
            NP        FT E R  F  L   GFTD  R  H D    Y++W   +  S   N G 
Sbjct: 178 ANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHIHGDAPERYTWWAQRSKTSKINNTGW 237

Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           RID+ + S      +  +  ID+  R      DHTP+++ +++
Sbjct: 238 RIDYWLTSNRIADNVTKSDMIDSGARQ-----DHTPIVMEIEL 275


>gi|326804146|ref|YP_004321964.1| exodeoxyribonuclease III [Aerococcus urinae ACS-120-V-Col10a]
 gi|326650889|gb|AEA01072.1| exodeoxyribonuclease III [Aerococcus urinae ACS-120-V-Col10a]
          Length = 281

 Score =  127 bits (320), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 62/280 (22%), Positives = 107/280 (38%), Gaps = 29/280 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPF------ 47
           +   +WN++S+ A +            +   I + +PD+I +QETK   K          
Sbjct: 1   MKFISWNIDSLNAALTSDSNRAQLSRQVLETIDQYDPDLIAIQETKLSAKGPTKKHQEAL 60

Query: 48  -ETLQSLN--YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
            E     N  +       +      ++   + +E +   P               T++  
Sbjct: 61  EEWFPDYNNAWVSSVEPARKSYAGNMVLYKKSLEPIITYPKIGAPEPMDSEGRIITLDFG 120

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
                 +Y P+         + ++            +L+ E+PLI  GD+N+  +  D  
Sbjct: 121 AFYFTQVYTPNAGNGLKRLAERQVWD--EKYAQYLSQLDQEKPLIATGDFNVAHKEIDLA 178

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIR 222
           +P      A FT E R  F KL + GFTD  R  H D   +YS+W      S   N G R
Sbjct: 179 HPENNHKSAGFTDEERSGFTKLLDQGFTDTFRHIHGDVEGVYSWWAQRVKTSKINNSGWR 238

Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSL 261
           ID+ ++S    + +  +  ID+  R      DHTP+ + +
Sbjct: 239 IDYFLVSDRIANAVEKSEMIDSGTRQ-----DHTPIYLEI 273


>gi|242054697|ref|XP_002456494.1| hypothetical protein SORBIDRAFT_03g037250 [Sorghum bicolor]
 gi|241928469|gb|EES01614.1| hypothetical protein SORBIDRAFT_03g037250 [Sorghum bicolor]
          Length = 325

 Score =  127 bits (320), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 64/268 (23%), Positives = 115/268 (42%), Gaps = 19/268 (7%)

Query: 4   VTVATWNVNSIRARIH-NL--AAWIKENNPDIICLQETKTEDKNFPF--ETLQSLNYHIE 58
           + + +WNVN ++  +         +   N D++CLQET  +++N       +   +Y   
Sbjct: 69  MKILSWNVNGLQTIVQSGFSADELVGRENFDVLCLQETHLQERNVDLFKNLVPEYDYTYW 128

Query: 59  TCGQKS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
           +C      Y+G A++S+ QPI +   L   + D + R I   F        + N Y+P+ 
Sbjct: 129 SCSVARLGYSGTAVISRVQPISVQYGLGVPEHDQEGRLITLEFD----DFYLVNAYVPNS 184

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
                 + + +++          ++LE  +P+I AGD N   +  D +NP      A FT
Sbjct: 185 G-RGLRRLNYRVNEWDPCFSDFIKKLESSKPVIVAGDLNCARESIDIHNPQAKTEAAGFT 243

Query: 177 LEVRQ-SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
           +E R+   +   + G  D  R  H     Y+FW    +    NKG R+D+ + S      
Sbjct: 244 VEERESFEENFSSEGLIDTFRKQHPNAVAYTFWG--ENQRITNKGWRLDYFLASESIADK 301

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +H +            SDH+P+ + L +
Sbjct: 302 VHDSYTLPDV----SLSDHSPIGLVLKL 325


>gi|327470504|gb|EGF15960.1| exodeoxyribonuclease [Streptococcus sanguinis SK330]
          Length = 275

 Score =  127 bits (320), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 59/283 (20%), Positives = 100/283 (35%), Gaps = 31/283 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + + +WN++S+ A +            +   ++  + DII +QETK        + L+ L
Sbjct: 1   MKLISWNIDSLNAALTSDSARAQLSQAVLQTLQAEDADIIAIQETKLSATGPTKKHLEIL 60

Query: 54  -----NYHIETCGQKS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
                +Y       +      Y G   L K +    VT                      
Sbjct: 61  TNLFPDYENTWRSSQEPARKGYAGTMFLYKKELTPTVTFPEIGAPSTMDVEGRIITLEFD 120

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                       G+ +                      L+ ++P++  GDYN+  +  D 
Sbjct: 121 GFFVTQVYTPNAGDGLKRLD---DRQVWDAKYAEYLATLDGQKPVLATGDYNVAHKEIDL 177

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221
            NP        FT E R  F  L   GFTD  R  H D  + Y++W   +  S   N G 
Sbjct: 178 ANPASNRRSPGFTDEERAGFTNLLAKGFTDTFRHLHGDIPNQYTWWAQRSKTSKINNTGW 237

Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           RID+ + S      +  +  ID+  R      DHTP+++ +++
Sbjct: 238 RIDYWLTSNRVADKVTKSDMIDSGARQ-----DHTPIVMEIEL 275


>gi|294787015|ref|ZP_06752269.1| exodeoxyribonuclease III [Parascardovia denticolens F0305]
 gi|315226658|ref|ZP_07868446.1| exodeoxyribonuclease [Parascardovia denticolens DSM 10105]
 gi|294485848|gb|EFG33482.1| exodeoxyribonuclease III [Parascardovia denticolens F0305]
 gi|315120790|gb|EFT83922.1| exodeoxyribonuclease [Parascardovia denticolens DSM 10105]
          Length = 277

 Score =  127 bits (320), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 60/284 (21%), Positives = 102/284 (35%), Gaps = 31/284 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           +   TWN++S+ A +            +   I   +P +  +QETK        +   SL
Sbjct: 1   MKFVTWNIDSLNAALTGDSERSRLSRQVLHDIAACSPQVFAIQETKLPAAGPSKKQKASL 60

Query: 54  -----NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF------TIN 102
                 Y I     +                        L  Q    E         T+ 
Sbjct: 61  ESIFPGYWIAWRSSQEPARKGYAGTMCLYRPEGGQEVSPLYPQIGAPEPMDSEGRILTLE 120

Query: 103 TQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD 162
                + ++Y P+         + ++       R   Q L+  +P+I  GD+N+  +  D
Sbjct: 121 FPGFYLTDVYTPNSGDGLRRLEERQVWD--DRYRSYLQDLDQVKPVIACGDFNVAHEEID 178

Query: 163 CYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYA-DSWSKNKG 220
             +P      A FT E R  F +L + GF D  R  H     +Y++W   A  S + N G
Sbjct: 179 LAHPASNRRSAGFTDEERDKFGQLLDAGFADTFRRLHPNQAGVYTWWAQRAVTSKANNSG 238

Query: 221 IRIDHIMLSPEATSLLHSARI-DTKPRGWTKPSDHTPVIVSLDI 263
            RID+ ++S      +    + DT  R      DH P+++ +D+
Sbjct: 239 WRIDYWLVSDRLMDKVRGVSVMDTGERR-----DHAPLVMEIDL 277


>gi|327462087|gb|EGF08416.1| exodeoxyribonuclease [Streptococcus sanguinis SK1057]
          Length = 322

 Score =  127 bits (320), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 60/283 (21%), Positives = 99/283 (34%), Gaps = 31/283 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + + +WN++S+ A +            +   ++  N DII +QETK        + L+ L
Sbjct: 48  MKLISWNIDSLNAALTSDSARAQLSQAVLQTLQAENADIIAIQETKLSATGPTKKHLEIL 107

Query: 54  -----NYHIETCGQKS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
                +Y       +      Y G   L K +    VT                      
Sbjct: 108 TNLFPDYENTWRSSQEPARKGYAGTMFLYKKELTPTVTFPEIGAPSTMDVEGRIITLEFD 167

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                       G+ +                      L+ ++P++  GDYN+  +  D 
Sbjct: 168 GFFVTQVYTPNAGDGLKRLD---DRQVWDAKYAEYLATLDGQKPVLATGDYNVAHKEIDL 224

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221
            NP        FT E R  F  L   GFTD  R  H D    Y++W   +  S   N G 
Sbjct: 225 ANPASNRRSPGFTDEERAGFTNLLAKGFTDTFRHLHGDIPDQYTWWAQRSKTSKINNTGW 284

Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           RID+ + S      +  +  ID+  R      DHTP+++ +++
Sbjct: 285 RIDYWLTSNRVADKVTKSDMIDSGARQ-----DHTPIVMEIEL 322


>gi|115844794|ref|XP_789515.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
 gi|115945899|ref|XP_001187208.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 302

 Score =  127 bits (320), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 75/262 (28%), Positives = 125/262 (47%), Gaps = 14/262 (5%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFET-LQSLNYHIETCG 61
           + ++ WNV  ++A I      ++ + +PDI   QETK +    P E  L   +       
Sbjct: 49  LKISAWNVGGMKAWIKKGGIDYLTKESPDIFFAQETKIDATKPPPEADLDDYHITYNAAE 108

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+GVA+ SK +P+ +   +  ++ D + R I A +     +     +Y+P+ +    
Sbjct: 109 KKGYSGVALFSKKEPLSVTKGMGIEEHDKEGRLITAEYD----SFYFVGVYVPNSSRKLV 164

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC-FTLEVR 180
              D +  W K F  +  + L+ ++P+I  GD N+  +  D  NP    N    FT + R
Sbjct: 165 R-LDYRQEWDKDFHAYLKK-LDAKKPVICCGDMNVAHEEIDLKNPKSNRNKTPGFTDQER 222

Query: 181 QSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           + F  L +MGF D+ R  +      YSFW Y  +  +KN G R+D+ ++S      L   
Sbjct: 223 EGFTSLLDMGFVDSFRHLYPEEADAYSFWTYMGNCRAKNVGWRLDYGVISKALVPKLC-- 280

Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261
             D + R  T  SDH P++VSL
Sbjct: 281 --DNQMRLQTFGSDHCPMVVSL 300


>gi|324993723|gb|EGC25642.1| exodeoxyribonuclease [Streptococcus sanguinis SK405]
 gi|324994964|gb|EGC26877.1| exodeoxyribonuclease [Streptococcus sanguinis SK678]
 gi|327462994|gb|EGF09315.1| exodeoxyribonuclease [Streptococcus sanguinis SK1]
          Length = 275

 Score =  127 bits (320), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 60/283 (21%), Positives = 100/283 (35%), Gaps = 31/283 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + + +WN++S+ A +            +   ++  N DII +QETK        + L+ L
Sbjct: 1   MKLISWNIDSLNAALTSDSARAKLSQAVLQTLQAENADIIAIQETKLSATGPTKKHLEIL 60

Query: 54  -----NYHIETCGQKS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
                +Y       +      Y G   L K +    VT                      
Sbjct: 61  TNLFPDYENTWRSSQEPARKGYAGTMFLYKKELTPTVTFPEIGAPSTMDVEGRIITLEFD 120

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                       G+ +                      L+ ++P++  GDYN+  +  D 
Sbjct: 121 GFFVTQVYTPNAGDGLKRLD---DRQVWDAKYAEYLATLDQQKPVLATGDYNVAHKEIDL 177

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221
            NP        FT E R  F  L   GFTD  R  H D  + Y++W   +  S   N G 
Sbjct: 178 ANPASNRRSPGFTDEERAGFTNLLAKGFTDTFRHLHGDIPNQYTWWAQRSKTSKINNTGW 237

Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           RID+ + S      +  +  ID+  R      DHTP+++ +++
Sbjct: 238 RIDYWLTSNRVADKVTKSDMIDSGARQ-----DHTPIVMEIEL 275


>gi|325694998|gb|EGD36902.1| exodeoxyribonuclease [Streptococcus sanguinis SK150]
          Length = 275

 Score =  127 bits (319), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 60/283 (21%), Positives = 100/283 (35%), Gaps = 31/283 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + + +WN++S+ A +            +   ++  N DII +QETK        + L+ L
Sbjct: 1   MKLISWNIDSLNAALTSDSARAQLSQAVLQTLQAENADIIAIQETKLSATGPTKKHLEIL 60

Query: 54  -----NYHIETCGQKS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
                +Y       +      Y G   L K +    VT                      
Sbjct: 61  TNLFPDYENTWRSSQEPARKGYAGTMFLYKKELTPTVTFPEIGAPSTMDVEGRIITLEFD 120

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                       G+ +                      L+ ++P++  GDYN+  +  D 
Sbjct: 121 GFFVTQVYTPNAGDGLKRLD---DRQVWDAKYAEYLGTLDKQKPVLATGDYNVAHKEIDL 177

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221
            NP        FT E R  F  L   GFTD  R  H D  + Y++W   +  S   N G 
Sbjct: 178 ANPASNRRSPGFTDEERAGFTNLLAKGFTDTFRHLHGDIPNQYTWWAQRSKTSKINNTGW 237

Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           RID+ + S      +  +  ID+  R      DHTP+++ +++
Sbjct: 238 RIDYWLTSNRVADKVTKSDMIDSGARQ-----DHTPIVMEIEL 275


>gi|254482734|ref|ZP_05095972.1| exodeoxyribonuclease III (xth) subfamily [marine gamma
           proteobacterium HTCC2148]
 gi|214037093|gb|EEB77762.1| exodeoxyribonuclease III (xth) subfamily [marine gamma
           proteobacterium HTCC2148]
          Length = 254

 Score =  127 bits (319), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 56/263 (21%), Positives = 104/263 (39%), Gaps = 14/263 (5%)

Query: 4   VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETL--QSLNYHIETC 60
           + V +++ + I+ A       W+KE + D +C+Q+ +  + +        +  N +    
Sbjct: 1   MRVISFSADGIKNAAEKGFYDWLKEQDADFVCIQDLRCSEYDLQDNLFFPEEYNPYFFDD 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
                NGVAI  +  P  I+T L   D D++ R+I+A +      + IG L  P   P  
Sbjct: 61  IDGKANGVAIYCRQLPKAIMTGLGFADFDMEGRYIQADYE----NISIGCLLAPSAEPGN 116

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
           + +   K  + +       +        +  G++N+   P D  +       + F  E R
Sbjct: 117 AEQQSRKNDFYELLGNHLQKVRNKRREFVICGNWNVAHTPADVQDTERNSTISGFLAEER 176

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           Q   +L   G+ D  R  +     +++W       + N G R D  ++S +    +    
Sbjct: 177 QWMNELFTEGYIDPFREINSDQDEFTWWP--EGDRATN-GWRSDFQVISKDLQYAVDYGA 233

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263
           I        + S H PVI+  DI
Sbjct: 234 IYKS----REFSTHAPVIMDYDI 252


>gi|254784446|ref|YP_003071874.1| histidine kinase [Teredinibacter turnerae T7901]
 gi|237684162|gb|ACR11426.1| histidine kinase [Teredinibacter turnerae T7901]
          Length = 257

 Score =  127 bits (319), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 58/266 (21%), Positives = 98/266 (36%), Gaps = 14/266 (5%)

Query: 4   VTVATWNVNSI-RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + V +  V+ I +A    L  WI+E + DIICLQ+ +  +     +      Y       
Sbjct: 1   MRVISLCVDGIHQAAQRGLFDWIEEQDADIICLQDLRALEYELDDDIFHPDGYFAYFFDS 60

Query: 62  -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
             K YNGVAI +++QP  ++  L           +E  +             L       
Sbjct: 61  GVKHYNGVAIYTRHQPKALIYGLGFASGVD----MEGRYLQVDFERYSIGSLLAPTAFSE 116

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
           +   + KI +   F     +        IF G++ +     D  N     N + +    +
Sbjct: 117 TESQEVKIKFFDDFQALLHKVTRKRRHFIFCGNWAMAHSKKDVENWQNNTNQSGYLPHEQ 176

Query: 181 QSFQK-LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           Q   +  + +G+ DA R        YS+W   +    +  G R D+ ++S   T  +  A
Sbjct: 177 QWMNQLFRQLGYADAFRVAVPEAGEYSWWP--SGKIGEGDGWRTDYQVVSEALTRKVEYA 234

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPE 265
            +          S H PVIV  DI +
Sbjct: 235 AMYK----TRHFSSHLPVIVDYDIDD 256


>gi|157150318|ref|YP_001450810.1| exodeoxyribonuclease III [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|157075112|gb|ABV09795.1| exodeoxyribonuclease III [Streptococcus gordonii str. Challis
           substr. CH1]
          Length = 275

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 61/283 (21%), Positives = 102/283 (36%), Gaps = 31/283 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + + +WN++S+ A +            +   ++  N DII +QETK        + L+ L
Sbjct: 1   MKLISWNIDSLNAALTSDSARAQLSQAVLQTLQAENADIIAIQETKLSATGPTKKHLEIL 60

Query: 54  -----NYHIETCGQKS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
                +Y       +      Y G   L K +   IVT                      
Sbjct: 61  TNLFPDYENTWRSSQEPARKGYAGTMFLYKKELSPIVTFPEIGAPSTMDVEGRIITLEFD 120

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                       G+ +      +               L+ ++P++  GDYN+  +  D 
Sbjct: 121 DFFVTQVYTPNAGDGLKRL---EDRQVWDAKYAEYLATLDEQKPVLATGDYNVAHKEIDL 177

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221
            NP        FT E R  F  L   GFTD  R  H D  + Y++W   +  S   N G 
Sbjct: 178 ANPASNRRSPGFTDEERTGFTNLLAKGFTDTFRYLHGDIPNQYTWWAQRSKTSKINNTGW 237

Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           RID+ + S      +  +  ID+  R      DHTP+++ +++
Sbjct: 238 RIDYWLTSNRVADKVTKSDMIDSGARQ-----DHTPIVMEIEL 275


>gi|167521904|ref|XP_001745290.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163776248|gb|EDQ89868.1| predicted protein [Monosiga brevicollis MX1]
          Length = 263

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 58/264 (21%), Positives = 98/264 (37%), Gaps = 14/264 (5%)

Query: 6   VATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY---HIE 58
           V +WNVN +RA + N    L   ++  NPD++ LQETK +  +          Y      
Sbjct: 3   VVSWNVNGLRAVLKNHPKALPDLVQAENPDLLFLQETKLQASHVADYANLLPGYTGLWSC 62

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
           +  +K Y+G A  +       ++   G       +              IG      G  
Sbjct: 63  SRAKKGYSGTAGATPTSDFRALSVQYGIKSAHHDQEGRTITVELPDLFVIGVYVPNSGQD 122

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
           +     D +++          + LE  +P++  GD N+     D YN       A  T +
Sbjct: 123 LKR--LDYRLNEWNVDFLAYIRELEASKPVLVVGDLNVAHLDLDIYNAGHLVKSAGCTPQ 180

Query: 179 VRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
            R +F +  + GFTD  R  +      +++W         +KG+R+D+ + S        
Sbjct: 181 ERTAFTEFLDQGFTDTFRKLYPEHTGAFTYWSARTGGRQDSKGLRLDYAVCSNALLEANS 240

Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261
             R      G    SDH P+ + L
Sbjct: 241 PLRCLDSVMG----SDHCPIAIVL 260


>gi|227891490|ref|ZP_04009295.1| exodeoxyribonuclease III [Lactobacillus salivarius ATCC 11741]
 gi|227866637|gb|EEJ74058.1| exodeoxyribonuclease III [Lactobacillus salivarius ATCC 11741]
          Length = 275

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 62/285 (21%), Positives = 108/285 (37%), Gaps = 35/285 (12%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTED----------- 42
           + + +WN++S+ A +            + A I + NPDII +QETK              
Sbjct: 1   MKLISWNIDSLNAALTSDSARAKQSREVLATIIDENPDIIAIQETKLSATGPTKKHQTIL 60

Query: 43  -KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI 101
            + FP   +    +       +      +      +      P  D            T+
Sbjct: 61  AEQFPDYEIT---WRSSQEPARKGYAGTMFLYKNNLNPTVSYPEIDAPEPMDSEGRIITL 117

Query: 102 NTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161
                 +  +Y P+         + ++             L+  +PL+ +GD+N+  +  
Sbjct: 118 EFDNFYVTQVYTPNAGDGLRRLAERQVWD--EKYADYLVSLDQNKPLLSSGDFNVAHKEI 175

Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNK 219
           D  +P    + A FT E R  F  L N GFTD  R  H D   +YS+W   +  S   N 
Sbjct: 176 DLAHPGNNHHSAGFTDEERAGFTNLLNKGFTDTFRYVHGDVKDVYSWWAQRSRTSKINNS 235

Query: 220 GIRIDHIMLSPEATSLLHSARI-DTKPRGWTKPSDHTPVIVSLDI 263
           G RID+ + S      +  + + D+  R      DHTP+++ ++I
Sbjct: 236 GWRIDYWLASNRIADKIVRSEMLDSGERR-----DHTPIVLEINI 275


>gi|222152632|ref|YP_002561807.1| exodeoxyribonuclease [Streptococcus uberis 0140J]
 gi|222113443|emb|CAR41130.1| exodeoxyribonuclease [Streptococcus uberis 0140J]
          Length = 275

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 57/280 (20%), Positives = 102/280 (36%), Gaps = 25/280 (8%)

Query: 4   VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFE----T 49
           + + +WN++S+ A +            +   +   +PDI+ +QETK        +     
Sbjct: 1   MKLISWNIDSLNAALTGESPRALLSRAVLDTLVTEDPDILAIQETKLSATGPTKKHMEIL 60

Query: 50  LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
           L     H+              +    +   T  P                    TL   
Sbjct: 61  LSYFPNHLHVWRSSVEPARKGYAGTLFLYRNTLNPVVTFPEIGAPDPMDAEGRIITLEFD 120

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRL---ELEEPLIFAGDYNIIPQPHDCYNP 166
           + Y+       +     ++   + +    ++ L   +  +P++  GDYN+     D  NP
Sbjct: 121 DFYVTQVYTPNAGDQLRRLPERQEWDIKYAEYLASLDRNKPVLATGDYNVAHHEIDLANP 180

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIRID 224
                 A FT E R  F  L   GFTD  R  H D  ++Y++W   +  S   N G RID
Sbjct: 181 ASNRRSAGFTDEERAGFTALLAKGFTDTFRYLHGDIPNVYTWWAQRSKTSKINNTGWRID 240

Query: 225 HIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           + + S      +  +  I +  R      DHTP+++ +D+
Sbjct: 241 YWLTSNRIADKVIKSEMIHSGERQ-----DHTPILLEIDL 275


>gi|325690669|gb|EGD32670.1| exodeoxyribonuclease [Streptococcus sanguinis SK115]
          Length = 275

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 60/283 (21%), Positives = 100/283 (35%), Gaps = 31/283 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + + +WN++S+ A +            +   ++  N DII +QETK        + L+ L
Sbjct: 1   MKLISWNIDSLNAALTSDSARAKLSQAVLQTLQAENADIIAIQETKLSATGPTKKHLEIL 60

Query: 54  -----NYHIETCGQKS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
                +Y       +      Y G   L K +    VT                      
Sbjct: 61  TNLFPDYENTWRSSQEPARKGYAGTMFLYKKELTPTVTFPEIGAPSTMDVEGRIITLEFD 120

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                       G+ +                      L+ ++P++  GDYN+  +  D 
Sbjct: 121 GFFVTQVYTPNAGDGLKRLDDRQVWDVKYAEY---LATLDQQKPVLATGDYNVAHKEIDL 177

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221
            NP        FT E R  F  L   GFTD  R  H D  + Y++W   +  S   N G 
Sbjct: 178 ANPASNRRSPGFTDEERAGFTNLLAKGFTDTFRHLHGDIPNQYTWWAQRSKTSKINNTGW 237

Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           RID+ + S      +  +  ID+  R      DHTP+++ +++
Sbjct: 238 RIDYWLTSNRVADKVTKSDMIDSGARQ-----DHTPIVMEIEL 275


>gi|116618622|ref|YP_818993.1| exonuclease III [Leuconostoc mesenteroides subsp. mesenteroides
           ATCC 8293]
 gi|116097469|gb|ABJ62620.1| Exonuclease III [Leuconostoc mesenteroides subsp. mesenteroides
           ATCC 8293]
          Length = 272

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 65/281 (23%), Positives = 113/281 (40%), Gaps = 30/281 (10%)

Query: 4   VTVATWNVNSIRARIHNL-----AAW-----IKENNPDIICLQETKTEDKNFPF------ 47
           +   +WN++SI A + +        W     I    PD+  +QETK +            
Sbjct: 1   MKFISWNIDSINAAVEHKSVRGEMTWSTLNEIATIRPDVFAIQETKLKSTGLTKKQATAI 60

Query: 48  -ETLQSLNYHIETCG-QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT 105
            E     + ++ +   +  Y+G  +LSK +P ++     G    +       T    T  
Sbjct: 61  AELFPEYHLYVNSSTARSGYSGTMVLSKVEPTQVEYPTIGAPGSMDLEGRIITLEFPTFF 120

Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165
           L          + I       +        R   + L+  +P+IF+GD N+  Q  D  N
Sbjct: 121 LSTVYTPNSGSSLIRLP----ERGEWDDKYREYIKTLDATKPVIFSGDMNVAHQEIDLKN 176

Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYAD-SWSKNKGIRI 223
           P    + A FT + R+ F  L + GFTD  R+ +     +Y++W   +  S   N G RI
Sbjct: 177 PKPNRHSAGFTDQEREKFSALLDAGFTDTFRSLNPDTPSVYTWWAQISKTSKINNSGWRI 236

Query: 224 DHIMLSPEATSLLH-SARIDTKPRGWTKPSDHTPVIVSLDI 263
           D+ ++S      +  S  IDT  R      DH P+++ +++
Sbjct: 237 DYYLVSDRIAENVTESCVIDTGARQ-----DHAPILLEINV 272


>gi|328473849|gb|EGF44679.1| exodeoxyribonuclease III [Listeria monocytogenes 220]
          Length = 225

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 51/227 (22%), Positives = 90/227 (39%), Gaps = 12/227 (5%)

Query: 38  TKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA 97
            K ++     +     +Y      +K Y+G AI +K +P+ +   L   + D + R I  
Sbjct: 10  LKLQEGQIELDLPAYKDY-WNYAVKKGYSGTAIFTKVEPLSVQYGLGVPEHDTEGRVITL 68

Query: 98  TFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII 157
            F                   +            +  +    + L+  +P++  GD N+ 
Sbjct: 69  EFEEFFMVTVYTPNSQAELKRLDYRM------TFEDAILEYVKNLDKTKPVVLCGDLNVA 122

Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWS 216
            +  D  NP     +A F+ E R  F    + GF D+ R  +      YS+W Y  ++ +
Sbjct: 123 HEEIDLKNPKTNRKNAGFSDEERAKFSAFLDAGFIDSFRYFYPDLTDAYSWWSYRMNARA 182

Query: 217 KNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +N G RID+ ++S      L  A+I     G    SDH PV + L++
Sbjct: 183 RNTGWRIDYFVVSERLKDKLVDAKIHADVLG----SDHCPVELELNL 225


>gi|306829996|ref|ZP_07463183.1| exodeoxyribonuclease III [Streptococcus mitis ATCC 6249]
 gi|304428007|gb|EFM31100.1| exodeoxyribonuclease III [Streptococcus mitis ATCC 6249]
          Length = 275

 Score =  127 bits (319), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 60/283 (21%), Positives = 98/283 (34%), Gaps = 31/283 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDK---NFPFETL 50
           + + +WN++S+ A +            +   +   N DII +QETK   K       E L
Sbjct: 1   MKLISWNIDSLNAALTSDSARAKLSQEVLQTLVAENADIIAIQETKLSAKGPTKKHLEVL 60

Query: 51  QSL--NYHIETCGQKS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
           + L   Y       +      Y G   L K +    +T                      
Sbjct: 61  EELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTITFPEIGAPSTMDVEGRIITLEFD 120

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                       G+ +                      L+ ++P++  GDYN+  +  D 
Sbjct: 121 DFFVTQVYTPNAGDGLKRLD---DRQVWDAKYAEYLATLDQQKPVLATGDYNVAHKEIDL 177

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221
            NP        FT E R  F  L   GFTD  R  H D    Y++W   +  S   N G 
Sbjct: 178 ANPASNHRSPGFTDEERAGFTNLLATGFTDTFRHIHGDVPERYTWWAQRSKTSKINNTGW 237

Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           RID+ + S      +  +  I++  R      DHTP+++ +++
Sbjct: 238 RIDYWLTSNRVADKVTKSDMINSGARQ-----DHTPIVMEIEL 275


>gi|24380027|ref|NP_721982.1| putative exodeoxyribonuclease III [Streptococcus mutans UA159]
 gi|290579994|ref|YP_003484386.1| putative exodeoxyribonuclease III [Streptococcus mutans NN2025]
 gi|13182937|gb|AAK14994.1|AF233280_1 nuclease SmnA [Streptococcus mutans]
 gi|24378017|gb|AAN59288.1|AE014995_5 putative exodeoxyribonuclease III [Streptococcus mutans UA159]
 gi|254996893|dbj|BAH87494.1| putative exodeoxyribonuclease III [Streptococcus mutans NN2025]
          Length = 275

 Score =  127 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 61/283 (21%), Positives = 107/283 (37%), Gaps = 31/283 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + + +WN++S+ A +            +   + E + DI+ +QETK   K    + L+ L
Sbjct: 1   MKLISWNIDSLNAALTSDSARALLSRAVLDTLMEQDADILAIQETKLSAKGPTKKHLRIL 60

Query: 54  -----NYHIETCG-----QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
                +Y +         +K Y G   L K      +T+                     
Sbjct: 61  KDYFPDYDVVWRSSVEPARKGYAGTMFLYKSSLQPTITYPEIGAPATMDDEGRIITLEFD 120

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                       G+ +                     +L+ ++P++  GDYN+  +  D 
Sbjct: 121 DFFVTQVYTPNAGDGLKRLDDRQIWDEKYAIY---LAQLDKQKPVLATGDYNVAHKEIDL 177

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221
            +P        FT E R  F  L   GFTD  R  H D  ++YS+W   +  S   N G 
Sbjct: 178 AHPSSNRRSPGFTDEERAGFTHLLEQGFTDTFRYIHGDVPNVYSWWAQRSKTSKINNSGW 237

Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           RID+ ++S   +  +  +  ID+  R      DHTP+++ +D+
Sbjct: 238 RIDYWLISNRLSDKILKSEMIDSGTRQ-----DHTPILLKIDL 275


>gi|195620624|gb|ACG32142.1| hypothetical protein [Zea mays]
          Length = 304

 Score =  127 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 69/270 (25%), Positives = 118/270 (43%), Gaps = 19/270 (7%)

Query: 2   SVVTVATWNVNSIRARIH-NL--AAWIKENNPDIICLQETKTEDKNFPF--ETLQSLNYH 56
           + + + +WNVN ++A +         +   N D++CLQET  E++N       +   +Y 
Sbjct: 46  NSMKILSWNVNGLQAIVQSGFSADELVARENFDVLCLQETHLEERNVDLFKNLVHEYDYT 105

Query: 57  IETCGQKS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
             +C      Y+G A++S+ QPI +   L   + D + R I   F        + N Y+P
Sbjct: 106 CWSCSVARLGYSGTAVISRVQPISVQYGLGIPEHDQEGRLITLEFD----DFYLVNAYVP 161

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
           +       + + +I+          ++LE  +P+I AGD N   Q  D +NP      A 
Sbjct: 162 NSG-RGLRRLNYRINDWDPCFSDFIKKLECSKPVIVAGDLNCARQSIDIHNPQAKTEAAG 220

Query: 175 FTLEVRQSFQKLQNMG-FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
           FT+E R+SF+   +     D  R  H     Y+FW    +    NKG R+D+ + S    
Sbjct: 221 FTIEERESFEVNFSRKGLVDTFRKQHPNAVAYTFWG--ENQRITNKGWRLDYFLASESIA 278

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             +H +            SDH+P+ + L +
Sbjct: 279 DKVHDSYTLPDV----ALSDHSPIGLLLKL 304


>gi|253751487|ref|YP_003024628.1| exodeoxyribonuclease [Streptococcus suis SC84]
 gi|253753388|ref|YP_003026529.1| exodeoxyribonuclease [Streptococcus suis P1/7]
 gi|253755783|ref|YP_003028923.1| exodeoxyribonuclease [Streptococcus suis BM407]
 gi|251815776|emb|CAZ51378.1| exodeoxyribonuclease [Streptococcus suis SC84]
 gi|251818247|emb|CAZ56055.1| exodeoxyribonuclease [Streptococcus suis BM407]
 gi|251819634|emb|CAR45379.1| exodeoxyribonuclease [Streptococcus suis P1/7]
 gi|292558119|gb|ADE31120.1| exodeoxyribonuclease III [Streptococcus suis GZ1]
 gi|319757905|gb|ADV69847.1| exodeoxyribonuclease [Streptococcus suis JS14]
          Length = 275

 Score =  127 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 60/280 (21%), Positives = 105/280 (37%), Gaps = 29/280 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + + +WN++S+ A +            +   +   + DII +QETK  DK    + L+ L
Sbjct: 1   MKLISWNIDSLNAALTAESPRALLSRAVIDTLVTEDADIIAIQETKLSDKGPTKKHLEIL 60

Query: 54  N---------YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
                     +       +      +      +      P               T+   
Sbjct: 61  ESYFPGYANTWRSSVEPARKGYAGTLFLYKNHLTPTITFPEIGAPTTMDSEGRIITLEFD 120

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
              +  +Y P+         D +I  ++        +L+  +P++  GDYN+  +  D  
Sbjct: 121 DFYVTQVYTPNAGDGLKRLADRQIWDVQ--YADYLAKLDSHKPVLATGDYNVAHKEIDLA 178

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIR 222
           NP        FT E RQ F  L   GFTD  R  H D  + Y++W   +  S   N G R
Sbjct: 179 NPASNRQSPGFTDEERQGFTNLLAKGFTDTFRHLHGDVLNAYTWWAQRSRTSKINNTGWR 238

Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSL 261
           ID+ ++S      +  +  ID+  R      DHTP+++ +
Sbjct: 239 IDYWLVSDRIADKVSKSDMIDSGARQ-----DHTPIVMEI 273


>gi|119475383|ref|ZP_01615736.1| exodeoxyribonuclease III [marine gamma proteobacterium HTCC2143]
 gi|119451586|gb|EAW32819.1| exodeoxyribonuclease III [marine gamma proteobacterium HTCC2143]
          Length = 255

 Score =  127 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 56/263 (21%), Positives = 106/263 (40%), Gaps = 15/263 (5%)

Query: 4   VTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETC 60
           + + ++  + IR A       W+ + + D IC+Q  K ++ +   +      Y  +    
Sbjct: 1   MRIISFCADGIREAAKKGFYDWVIDQDADFICVQNLKAQEYDLQSDVFWPQGYNPYFFDA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
             K  NGVAI  +  P  I+T L   D D++ R+I+A F    Q + IG L  P      
Sbjct: 61  VDKDLNGVAIYCREMPKAIMTGLGFVDFDMEGRYIQADF----QNISIGCLLAPSAAKED 116

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
           +   + K  +   F    S+        +  G++N+    +D  +    +N    + E +
Sbjct: 117 NAAKNRKKHFFDLFQNHLSKVRNKRREFVICGNWNMTHNQNDLQDFQSNQNVPGCSPEEQ 176

Query: 181 QSFQKLQ-NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           Q        +G+ DA R  +  +  +++W    +      G R+D  ++S    S +   
Sbjct: 177 QWMDHTMTELGYVDAFREVNSDNDEFTWWP---EGKQGENGWRVDLQIVSSGLKSAIEYG 233

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
            I        + S+H P+I+  D
Sbjct: 234 AIYKN----QQFSNHAPLIMDYD 252


>gi|319939581|ref|ZP_08013940.1| exodeoxyribonuclease III [Streptococcus anginosus 1_2_62CV]
 gi|319811170|gb|EFW07476.1| exodeoxyribonuclease III [Streptococcus anginosus 1_2_62CV]
          Length = 275

 Score =  127 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 56/282 (19%), Positives = 102/282 (36%), Gaps = 29/282 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKN-------FP 46
           + + +WN++S+ A +            +   +   + DII +QETK              
Sbjct: 1   MKLISWNIDSLNAALTSDSARAQLSQAVLQTLVRLDADIIAIQETKLSANGPTKKHLTIL 60

Query: 47  FETLQSLN--YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
            E   +    +       +      +      +  +   P               T+   
Sbjct: 61  EELFPNYQLTWRSSIDPARKGYAGTMFLYKNNLTPIITFPEIGAPSTMDAEGRIITLEFD 120

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
              +  +Y P+         + ++   K         L+ ++P++  GDYN+     D  
Sbjct: 121 NFFVTQVYTPNAGDGLKRLVERQVWDQK--YADYLTTLDEKKPVLATGDYNVAHNEIDLA 178

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIR 222
           +P        FT E R  F  L N GFTD  R  H D  ++YS+W   +  S   N G R
Sbjct: 179 HPSSNRRSPGFTDEERSGFTNLLNRGFTDTFRYIHGDIPNVYSWWAQRSKTSKINNSGWR 238

Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           ID+ + S      +  +  ID+  R      DHTP+++ +++
Sbjct: 239 IDYWLTSNRIADKVTKSEMIDSGTRQ-----DHTPIVLEIEL 275


>gi|302820698|ref|XP_002992015.1| hypothetical protein SELMODRAFT_134604 [Selaginella moellendorffii]
 gi|300140137|gb|EFJ06864.1| hypothetical protein SELMODRAFT_134604 [Selaginella moellendorffii]
          Length = 558

 Score =  127 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 64/359 (17%), Positives = 109/359 (30%), Gaps = 82/359 (22%)

Query: 4   VTVATWNVNSIRARI---HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           + + ++NVN +RAR+    +L A++   + DIICLQETK   +    +      Y     
Sbjct: 1   MRIVSYNVNGLRARLSPARSLRAFLDSLDADIICLQETKIRRQELTADIATPQGYESFFS 60

Query: 61  GQKS-------YNGVAILSKYQP-----------------IEIVTHLPGDDLDVQARFIE 96
             ++       Y+GVA   K +                  +       GD       +  
Sbjct: 61  CTRTVKKGRLGYSGVATFCKVECGNNVALPVAAEEGFTGLLTSARAGEGDKEFWLGSYDP 120

Query: 97  -------------------ATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF 137
                                   +     + N+Y P+     + + D K+++ +     
Sbjct: 121 VLTVEGFTRQELLDLDNEGRCIVTDHGHFVLFNVYGPNVGCGDAERQDFKLNFYQVLQCR 180

Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA 197
               L+    +I  GD NI P P D  +P    + +      R                 
Sbjct: 181 LESILKQGRRIIIVGDLNISPYPIDSCDPGPEFDTSPSRQWFRSLLVSEGGAFSDAFRVF 240

Query: 198 THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS------------------- 238
             +    Y+ W   + +   N G RIDH++++        S                   
Sbjct: 241 HPERAEAYTCWSQASGAEEFNYGSRIDHVLIAGPCAGHCQSPDGSHGNSSCDGFAKCGTD 300

Query: 239 -ARI---------DTKPRGWTK------PSDHTPVIVSLD-IPEPRKKQQDSTSQNMKP 280
              I         DT PR           SDH PVI+ L  +P     +    +    P
Sbjct: 301 MCDILLEFKRAKLDTLPRWSGGRSLKLDGSDHAPVILQLKHLPSIPPHEAPQLAARFMP 359


>gi|325696280|gb|EGD38171.1| exodeoxyribonuclease [Streptococcus sanguinis SK160]
          Length = 322

 Score =  127 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 55/282 (19%), Positives = 100/282 (35%), Gaps = 29/282 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDK-------NFP 46
           + + +WN++S+ A +            +   ++  N DII +QETK              
Sbjct: 48  MKLISWNIDSLNAALTSDSARAQLSQAVLQTLQAENADIIAIQETKLSATGPTKKHLEIL 107

Query: 47  FETLQSLN--YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
            +        +       +      +    + +      P               T+   
Sbjct: 108 TDLFPDYENTWRSSREPARKGYAGTMFLYKKELTPTVTFPEIGAPSTMDVEGRIITLEFD 167

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
              +  +Y P+         D ++             L+ ++P++  GDYN+  +  D  
Sbjct: 168 GFFVTQVYTPNAGDGLKRLDDRQVWD--AKYAEYLATLDEQKPVLATGDYNVAHKEIDLA 225

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIR 222
           NP        FT E R  F  L   GFTD  R  H D  + Y++W   +  S   N G R
Sbjct: 226 NPASNRRSPGFTDEERAGFTNLLAKGFTDTFRHLHGDIPNQYTWWAQRSKTSKINNTGWR 285

Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           ID+ + S      +  +  ID+  R      DHTP+++ +++
Sbjct: 286 IDYWLTSNRVADKVTKSDMIDSGARQ-----DHTPIVMEIEL 322


>gi|223932412|ref|ZP_03624414.1| exodeoxyribonuclease III Xth [Streptococcus suis 89/1591]
 gi|330832647|ref|YP_004401472.1| exodeoxyribonuclease [Streptococcus suis ST3]
 gi|223898866|gb|EEF65225.1| exodeoxyribonuclease III Xth [Streptococcus suis 89/1591]
 gi|329306870|gb|AEB81286.1| exodeoxyribonuclease [Streptococcus suis ST3]
          Length = 275

 Score =  127 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 60/280 (21%), Positives = 105/280 (37%), Gaps = 29/280 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + + +WN++S+ A +            +   +   + DII +QETK  DK    + L+ L
Sbjct: 1   MKLISWNIDSLNAALTAESPRALLSRAVIDTLVTEDADIIAIQETKLSDKGPTKKHLEIL 60

Query: 54  N---------YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
                     +       +      +      +      P               T+   
Sbjct: 61  ESYFPGYANTWRSSVEPARKGYAGTLFLYKNHLSPTITFPEIGAPTTMDSEGRIITLEFD 120

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
              +  +Y P+         D +I  ++        +L+  +P++  GDYN+  +  D  
Sbjct: 121 DFYVTQVYTPNAGDGLKRLADRQIWDVQ--YADYLAKLDSHKPVLATGDYNVAHKEIDLA 178

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIR 222
           NP        FT E RQ F  L   GFTD  R  H D  + Y++W   +  S   N G R
Sbjct: 179 NPASNRQSPGFTDEERQGFTNLLAKGFTDTFRHLHGDVLNAYTWWAQRSRTSKINNTGWR 238

Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSL 261
           ID+ ++S      +  +  ID+  R      DHTP+++ +
Sbjct: 239 IDYWLVSDRIADKVSKSDMIDSGARQ-----DHTPIVMEI 273


>gi|251781878|ref|YP_002996180.1| putative 3'-exo-deoxyribonuclease [Streptococcus dysgalactiae
           subsp. equisimilis GGS_124]
 gi|242390507|dbj|BAH80966.1| putative 3'-exo-deoxyribonuclease [Streptococcus dysgalactiae
           subsp. equisimilis GGS_124]
 gi|323126691|gb|ADX23988.1| exodeoxyribonuclease III [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 275

 Score =  127 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 58/283 (20%), Positives = 104/283 (36%), Gaps = 31/283 (10%)

Query: 4   VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + + +WN++S+ A +            +   +   + DII +QETK   K    + +++L
Sbjct: 1   MKLISWNIDSLNAALTGESPRALLSRAVLDTLVAQDADIIAIQETKLSAKGPTKKHIETL 60

Query: 54  -NYHIETCGQKSYN---------GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
            +Y  +       +         G   L K     ++T                      
Sbjct: 61  LSYFPDYLHVWRSSVEPARKGYAGTMFLYKNTLNPVITFPEIGAPTTMDAEGRMITLEFE 120

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                       G+ +   +                  L+ ++P++  GDYN+  +  D 
Sbjct: 121 NFFVTQVYTPNAGDGLRRLEDRQIWDQKYADY---LVELDAQKPVLATGDYNVAHKEIDL 177

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221
            NP        FT E RQ F  L   GFTD  R  H D  ++Y++W   +  S   N G 
Sbjct: 178 ANPGSNRRSPGFTDEERQGFTNLLARGFTDTFRHLHGDIPNVYTWWAQRSKTSKINNTGW 237

Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           RID+ + S      ++ +  I +  R      DHTP+++ +D+
Sbjct: 238 RIDYWLTSNRLVDKINRSEMISSGERQ-----DHTPILLDIDL 275


>gi|147789500|emb|CAN69587.1| hypothetical protein VITISV_019797 [Vitis vinifera]
          Length = 632

 Score =  127 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 61/359 (16%), Positives = 98/359 (27%), Gaps = 82/359 (22%)

Query: 4   VTVATWNVNSIRARIHNL---AAWIKENNPDIICLQETKTEDKNFPFETLQSL------- 53
           + + T+NVN +R RI        ++   + DIIC+QETK        + + +        
Sbjct: 1   MKIVTYNVNGLRPRISQFGSLLKFLSSLDADIICVQETKLSRHELTADVVMADGYESFFS 60

Query: 54  ----------NYHIETCGQKSYNGVAILSKYQPIEIVTHLPG------------------ 85
                      Y       +  +  +      PI       G                  
Sbjct: 61  CTRTNSKGRVGYSGVATFCRVKSAFSSTEVALPIAAEEGFTGLLEKSGGFGTGKDEIPVK 120

Query: 86  ---------------DDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISW 130
                          D            F        + N+Y P  +   + +   K ++
Sbjct: 121 AEGLEEFAKDELLKVDSEGRCIITDHGHFADYGNWPVLFNIYGPRADSEDTERIQFKHTF 180

Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG 190
            +   +      +    +   GD NI P   D  +         F    R    +     
Sbjct: 181 FQILQKRWETLQQQGRRIFVVGDLNIAPAAIDRCDAGPDFEKNEFRRWFRSMLVECGGPF 240

Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE-------ATSL------LH 237
           F        D    Y+ W     +   N G RIDHI+ S                   + 
Sbjct: 241 FDVFRAKHPDRREAYTCWSSSTGAEEFNYGSRIDHILSSGSCLHQDHCLQDRIFVTCHVK 300

Query: 238 SARIDTKPRGWT---------------KPSDHTPVIVSL-DIPEPRKKQQDSTSQNMKP 280
              I T+ + W                + SDH PV +SL DIP+  +    S S    P
Sbjct: 301 ECDILTQFKRWKPGNKPRWKGGRSIKLEGSDHAPVFMSLMDIPDVAQHSTPSLSARYVP 359


>gi|324991375|gb|EGC23308.1| exodeoxyribonuclease [Streptococcus sanguinis SK353]
          Length = 275

 Score =  127 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 62/283 (21%), Positives = 101/283 (35%), Gaps = 31/283 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + + +WN++S+ A +            +   ++  N DII +QETK        + L+ L
Sbjct: 1   MKLISWNIDSLNAALTSDSARAQLSQAVLQTLQAENADIIAIQETKLSASGPTKKHLEIL 60

Query: 54  -----NYHIETCGQKS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
                 Y       +      Y G   L K +   IVT                      
Sbjct: 61  TNLFPEYENTWRSSQEPARKGYAGTMFLYKKELTPIVTFPEIGAPSTMDVEGRIITLEFD 120

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                       G+ +                     RL+ ++P++  GDYN+  +  D 
Sbjct: 121 DFFVTQVYTPNAGDGLKRLD---DRQVWDAKYAEYLARLDGQKPVLATGDYNVAHKEIDL 177

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221
            NP        FT E R  F  L   GFTD  R  H D  + Y++W   +  S   N G 
Sbjct: 178 ANPASNRRSPGFTDEERAGFTNLLAKGFTDTFRHLHGDIPNKYTWWAQRSKTSKINNTGW 237

Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           RID+ + S      +  +  ID+  R      DHTP+++ +++
Sbjct: 238 RIDYWLTSNRVADKVTKSDMIDSGARQ-----DHTPIVMEIEL 275


>gi|125718506|ref|YP_001035639.1| exodeoxyribonuclease, putative [Streptococcus sanguinis SK36]
 gi|125498423|gb|ABN45089.1| Exodeoxyribonuclease, putative [Streptococcus sanguinis SK36]
          Length = 322

 Score =  127 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 57/282 (20%), Positives = 103/282 (36%), Gaps = 29/282 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + + +WN++S+ A +            +   ++  N DII +QETK        + L+ L
Sbjct: 48  MKLISWNIDSLNAALTSDSARAQLSQAVLQTLQAENADIIAIQETKLSATGPTKKHLEIL 107

Query: 54  N---------YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
                     +       +      +    + +      P               T+   
Sbjct: 108 TNLFPEYENTWRSSQEPARKGYAGTMFLYKKELTPTVTFPEIGAPSTMDVEGRIITLEFD 167

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
              +  +Y P+         D ++             L+ ++P++  GDYN+  +  D  
Sbjct: 168 GFFVTQVYTPNAGDGLKRLDDRQVWD--AKYAEYLATLDEQKPVLATGDYNVAHKEIDLA 225

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIR 222
           NP        FT E R  F  L   GFTD  R  H D  + Y++W   +  S   N G R
Sbjct: 226 NPASNRRSPGFTDEERAGFTNLLAKGFTDTFRHLHGDIPNQYTWWAQRSKTSKINNTGWR 285

Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           ID+ + S      +  +  ID+  R      DHTP+++ +++
Sbjct: 286 IDYWLTSNRVADKVTKSDMIDSGARQ-----DHTPIVMEIEL 322


>gi|330505628|ref|YP_004382497.1| exodeoxyribonuclease III Xth [Pseudomonas mendocina NK-01]
 gi|328919914|gb|AEB60745.1| exodeoxyribonuclease III Xth [Pseudomonas mendocina NK-01]
          Length = 254

 Score =  127 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 68/258 (26%), Positives = 111/258 (43%), Gaps = 13/258 (5%)

Query: 10  NVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG--QKSYN 66
           NVN I+A     L +W++  N D+ICLQ+T+        +  Q   Y +  C     S  
Sbjct: 2   NVNGIQAAAERGLLSWLQAQNADVICLQDTRASAFEMDDQAFQLDGYFLYACDGEVPSQG 61

Query: 67  GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDD 126
           GVA+ S+ QP  +++ L  +  D   R+++A F      + I  L LP G        + 
Sbjct: 62  GVALYSRLQPKAVISGLGFEMADRYGRYLQADFD----KVSIATLLLPSGR-DGDESLNQ 116

Query: 127 KISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF-TLEVRQSFQK 185
           K  ++  F  +  ++       I+ G  ++  Q  D  N    +    F   E     + 
Sbjct: 117 KFKFMDDFTHYLDKQRRKRREYIYCGSLHVAHQKMDVKNWRDCQQSPGFLAPERAWMDEV 176

Query: 186 LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKP 245
           + NMG+ DA+R        +S+W     +   N G R D+ +L+P     + SAR+  +P
Sbjct: 177 VGNMGYVDALREVSREGDQFSWWPDNEQAEMLNLGYRFDYQLLTPGMRRSVRSARLPRQP 236

Query: 246 RGWTKPSDHTPVIVSLDI 263
           R     S H P+IV  D 
Sbjct: 237 R----FSQHAPLIVDYDW 250


>gi|183233999|ref|XP_650532.2| exodeoxyribonuclease III [Entamoeba histolytica HM-1:IMSS]
 gi|169801308|gb|EAL45146.2| exodeoxyribonuclease III, putative [Entamoeba histolytica
           HM-1:IMSS]
          Length = 319

 Score =  127 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 65/263 (24%), Positives = 112/263 (42%), Gaps = 18/263 (6%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN-YHIETCG 61
           + +AT+NV S  A +   L  +IKE NPDI+C+QETK +D   P   +   + Y   +  
Sbjct: 70  IKIATYNVASWNAAMKKGLNEFIKEENPDILCVQETKLQDGVNP--MIDGYHCYFSASTA 127

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y G AILSK +P+ I   + G + +                  + N      N +  
Sbjct: 128 KKGYAGTAILSKEEPLSITKKINGKENEHGRIITVEYEKFYLVNSYVMNSGQRLENLVK- 186

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
                + +   + +R   + L+ ++ +I+ GD N+  +  D   P+     A FT E R 
Sbjct: 187 -----RTTEWDKDMREHLKALQKKKNVIWCGDLNVALRWIDVAKPMTRLRCAGFTKEERA 241

Query: 182 SFQKLQ-NMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           S  +    +   D  +  +      Y+F+       SK  G R+D+  +S +    +   
Sbjct: 242 STNETIKELNLVDTFQVKYPKKRDFYTFFS--FKDKSKTAGWRLDYFFVSKDLVDSVT-- 297

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
           +I    R     SDH P+I+ + 
Sbjct: 298 QIYR--RKEISASDHVPLIIHIK 318


>gi|238855799|ref|ZP_04646091.1| exodeoxyribonuclease III [Lactobacillus jensenii 269-3]
 gi|260665239|ref|ZP_05866088.1| exodeoxyribonuclease III [Lactobacillus jensenii SJ-7A-US]
 gi|282933520|ref|ZP_06338892.1| exodeoxyribonuclease III [Lactobacillus jensenii 208-1]
 gi|238831575|gb|EEQ23920.1| exodeoxyribonuclease III [Lactobacillus jensenii 269-3]
 gi|260560976|gb|EEX26951.1| exodeoxyribonuclease III [Lactobacillus jensenii SJ-7A-US]
 gi|281302366|gb|EFA94596.1| exodeoxyribonuclease III [Lactobacillus jensenii 208-1]
          Length = 275

 Score =  127 bits (318), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 57/280 (20%), Positives = 106/280 (37%), Gaps = 25/280 (8%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTED-------KNFP 46
           + + +WN++S+ A +           ++   I E  PDI+ +QETK              
Sbjct: 1   MLLISWNIDSLNAALTSDSARAQKTRHVLTQIAEKEPDILAIQETKLRATGPTKKHAEIL 60

Query: 47  FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
            E     +Y   +  + +  G A         +   +    +            I  +  
Sbjct: 61  QEMFPDYDYVWRSSEEPARKGYAGTMYLYKKSLKPEVSYPKIGAPDTMDFEGRIITLEFP 120

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
                 +   N     K         +      Q L++++P++ +GDYN+  +  D  +P
Sbjct: 121 EYFVTQVYTPNAGGELKRLSDRQGWDKKYIEYLQELDVQKPVLASGDYNVAHEEIDLKHP 180

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYY-ADSWSKNKGIRID 224
               + A FT E R  F +L   GFTD+ R  H     +YS+W      + + N G RID
Sbjct: 181 ENNHHSAGFTDEERADFTELLAAGFTDSFRKIHGNIPEVYSWWAQRIRTAKANNSGWRID 240

Query: 225 HIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           + + S      +  +  +DT  R      DH P+++ +++
Sbjct: 241 YWLTSNRIADKIKKSEMMDTGERA-----DHCPIVLEIEL 275


>gi|290986733|ref|XP_002676078.1| predicted protein [Naegleria gruberi]
 gi|284089678|gb|EFC43334.1| predicted protein [Naegleria gruberi]
          Length = 340

 Score =  126 bits (317), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 58/268 (21%), Positives = 105/268 (39%), Gaps = 15/268 (5%)

Query: 5   TVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTEDKNFPFET----LQSLNYH 56
              +WNVN I A        L   +++  P  +CLQETK  +     E      ++   H
Sbjct: 76  KFISWNVNGISAVFRKEPNYLKMLVEKEEPTCLCLQETKLSEDVKLSEMAQYKFKNYIGH 135

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
             T   +           +    V ++       +      T T+  +   + N Y P+ 
Sbjct: 136 FNTSRARKGYSGTACFVLKHGPKVLNVKFGIGKDKHDLEGRTITVEYEDFYLVNTYCPNS 195

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
                 + + +       L    ++LE ++P+I+ GD N+     D ++P+       FT
Sbjct: 196 GQ-NLDRLEYRTKEWDVDLLKYFEKLEKKKPIIWGGDLNVAISEMDIHDPLTLSKSPGFT 254

Query: 177 LEVRQSFQ--KLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
           LE RQS       +  F D+ R  +     Y+++ Y  D   + KG RID+ + S     
Sbjct: 255 LEERQSSPLVTKASPPFIDSFRYKNPYKKQYTYYGYINDMRLQKKGWRIDYFVCSNSLKD 314

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
            + ++ I  +  G    SDH P+ + ++
Sbjct: 315 KIVNSYILEEYFG----SDHLPIGLIIN 338


>gi|322411221|gb|EFY02129.1| exodeoxyribonuclease III [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 275

 Score =  126 bits (317), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 59/283 (20%), Positives = 104/283 (36%), Gaps = 31/283 (10%)

Query: 4   VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + + +WN++S+ A +            +   +   + DII +QETK   K    + ++SL
Sbjct: 1   MKLISWNIDSLNAALTGESPRALLSRTVLDTLVAQDADIIAIQETKLSAKGPTKKHVESL 60

Query: 54  -NYHIETCGQKSYN---------GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
            +Y  +       +         G   L K     ++T                      
Sbjct: 61  LSYFPDYLHVWRSSVEPARKGYAGTMFLYKNTLNPVITFPEIGAPTTMDAEGRMITLEFE 120

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                       G+ +   +                  L+ ++P++  GDYN+  +  D 
Sbjct: 121 DFFVTQVYTPNAGDGLRRLEDRQIWDQKYADY---LAELDAQKPVLATGDYNVAHKEIDL 177

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGI 221
            NP        FT E RQ F  L   GFTD  R  H D  ++Y++W   +  S   N G 
Sbjct: 178 ANPGSNRRSPGFTDEERQGFTNLLAKGFTDTFRHLHGDIPNVYTWWAQRSKTSKINNTGW 237

Query: 222 RIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           RID+ + S      ++ +  I +  R      DHTP+++ +D+
Sbjct: 238 RIDYWLTSNRLVDKINRSEMISSGERQ-----DHTPILLDIDL 275


>gi|319745559|gb|EFV97861.1| exodeoxyribonuclease III [Streptococcus agalactiae ATCC 13813]
          Length = 275

 Score =  126 bits (317), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 66/282 (23%), Positives = 108/282 (38%), Gaps = 29/282 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + + +WN++S+ A +            +   +   + DII +QETK   K    + L+ L
Sbjct: 1   MKLISWNIDSLNAALTSESTRALMSRQVIDTLVAEDADIIAIQETKLSAKGPTKKHLEVL 60

Query: 54  N-YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL------ 106
             Y  E       +       Y     +     + +         T   N   +      
Sbjct: 61  ETYFPEYDLVWRSSVEPARKGYAGTMFLYRKGLNPIVSFPEIDAPTTMDNEGRIITLELE 120

Query: 107 --RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
              I  +Y P+         D +I  I          L+ ++P++  GDYN+  +  D  
Sbjct: 121 NCYITQVYTPNAGDALKRLGDRQIWDI--KYAEYLATLDSQKPVLATGDYNVAHKEIDLA 178

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIR 222
           NP      A FT E RQ F  L   GFTD  R  H D  ++YS+W   +  S   N G R
Sbjct: 179 NPSSNRRSAGFTDEERQGFTNLLAKGFTDTFRYLHGDVPNVYSWWAQRSRTSKINNTGWR 238

Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           ID+ + S      +  +  I +  R      DHTP+I+ +++
Sbjct: 239 IDYWLTSNRVADKITKSEMIHSGDRQ-----DHTPIILEIEL 275


>gi|322388347|ref|ZP_08061951.1| exodeoxyribonuclease [Streptococcus infantis ATCC 700779]
 gi|321141019|gb|EFX36520.1| exodeoxyribonuclease [Streptococcus infantis ATCC 700779]
          Length = 340

 Score =  126 bits (317), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 60/284 (21%), Positives = 102/284 (35%), Gaps = 31/284 (10%)

Query: 2   SVVTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTE---DKNFPFE 48
           +++ + +WN++S+ A +           ++   +   N DII +QETK           E
Sbjct: 64  NIMKLISWNIDSLNAALTSDSARAKLSQDVLQTLVAENADIIAIQETKLSATGPTKKHLE 123

Query: 49  TLQSL--NYHIETCGQKS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI 101
            L+ L   Y       +      Y G   L K +    ++                    
Sbjct: 124 VLEELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAPSTMDSEGRIITLE 183

Query: 102 NTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161
                         G+ +   +                 +L+ ++P++  GDYN+  +  
Sbjct: 184 FDTFFVTQVYTPNAGDGLKRLEERQVWDVKYAEY---LAQLDKQKPVLATGDYNVAHKEI 240

Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNK 219
           D  NP        FT E R+ F  L   GFTD  R  H D    Y++W   +  S   N 
Sbjct: 241 DLANPASNRRSPGFTDEEREGFTNLLAKGFTDTFRHIHGDVPERYTWWAQRSKTSKINNT 300

Query: 220 GIRIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLD 262
           G RID+ + S      +  +  ID+  R      DHTP+++ +D
Sbjct: 301 GWRIDYWLTSNRVADKVSKSDMIDSGARQ-----DHTPIVMEID 339


>gi|254716967|ref|ZP_05178778.1| Exodeoxyribonuclease III [Brucella ceti M13/05/1]
          Length = 191

 Score =  126 bits (317), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 102/185 (55%), Positives = 133/185 (71%)

Query: 79  IVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFA 138
           I   LPGDD D QARFIE  ++ +T  +R+ +LYLP+GNPI + K+  K+SW++R   +A
Sbjct: 7   INKGLPGDDSDEQARFIEGIYSTDTGVVRVVSLYLPNGNPIDTEKFPYKLSWMQRLENWA 66

Query: 139 SQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT 198
            +RL LEEPL+ AGDYN+IP+P D  NP  W  DA F  + RQ+F++L+N+GFTDAIRA+
Sbjct: 67  KKRLTLEEPLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAFRRLENLGFTDAIRAS 126

Query: 199 HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVI 258
            D   +YSFWDY A +W KN GIRIDH+MLSPEAT+   SA I+   R W KPSDH PV 
Sbjct: 127 TDESGVYSFWDYQAGAWQKNNGIRIDHLMLSPEATNRFISANIEKHVRAWEKPSDHVPVT 186

Query: 259 VSLDI 263
           V+L +
Sbjct: 187 VTLAV 191


>gi|218189227|gb|EEC71654.1| hypothetical protein OsI_04097 [Oryza sativa Indica Group]
          Length = 321

 Score =  126 bits (317), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 65/282 (23%), Positives = 113/282 (40%), Gaps = 33/282 (11%)

Query: 4   VTVATWNVNSIRARI--HNL--AAWIKENNPDIICLQETKTED----------------- 42
           + + +WN+N +   +           +  N D++CLQET  E                  
Sbjct: 51  MKILSWNINGLHDVVTTKGFSARDLAQRENFDVLCLQETHLEASLGVSAIRLLIYTEKDV 110

Query: 43  KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN 102
           + F        +Y   +  +  Y+G A++S+ +PI +   +   + D + R I   F   
Sbjct: 111 EKFKNLIADYDSYWSCSVSRLGYSGTAVISRVKPISVQYGIGIREHDHEGRVITLEFDG- 169

Query: 103 TQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD 162
                + N Y+P+         + +++          + LE  +P+I AGD N   Q  D
Sbjct: 170 ---FYLVNAYVPNSGRFLRR-LNYRVNNWDPCFSNYVKILEKSKPVIVAGDLNCARQSID 225

Query: 163 CYNPIIWENDACFTLEVRQSFQKLQNMG-FTDAIRATHDTHHLYSFWDYYADSWSKNKGI 221
            +NP      A FT+E R+SF+   +     D  R  H     Y+FW    +    NKG 
Sbjct: 226 IHNPPAKTKSAGFTIEERESFETNFSSKGLVDTFRKQHPNAVGYTFWG--ENQRITNKGW 283

Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           R+D+ + S   T  +H + I          SDH+P+ + L +
Sbjct: 284 RLDYFLASESITDKVHDSYILPDV----SFSDHSPIGLVLKL 321


>gi|77406522|ref|ZP_00783574.1| exodeoxyribonuclease III [Streptococcus agalactiae H36B]
 gi|77411367|ref|ZP_00787714.1| exodeoxyribonuclease III [Streptococcus agalactiae CJB111]
 gi|77162540|gb|EAO73504.1| exodeoxyribonuclease III [Streptococcus agalactiae CJB111]
 gi|77174861|gb|EAO77678.1| exodeoxyribonuclease III [Streptococcus agalactiae H36B]
          Length = 275

 Score =  126 bits (316), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 66/282 (23%), Positives = 108/282 (38%), Gaps = 29/282 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + + +WN++S+ A +            +   +   + DII +QETK   K    + L+ L
Sbjct: 1   MKLISWNIDSLNAALTSESTRALMSRQVIDTLVAEDADIIAIQETKLSAKGPTKKHLEVL 60

Query: 54  N-YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL------ 106
             Y  E       +       Y     +     + +         T   N   +      
Sbjct: 61  ETYFPEYDLVWRSSVEPARKGYAGTMFLYRKGLNPIVSFPEIDAPTTMDNEGRIITLELE 120

Query: 107 --RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
              I  +Y P+         D +I  I          L+ ++P++  GDYN+  +  D  
Sbjct: 121 NCYITQVYTPNAGDGLKRLADRQIWDI--KYAEYLATLDSQKPVLATGDYNVAHKEIDLA 178

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIR 222
           NP      A FT E RQ F  L   GFTD  R  H D  ++YS+W   +  S   N G R
Sbjct: 179 NPSSNRRSAGFTDEERQGFTNLLAKGFTDTFRYLHGDVPNVYSWWAQRSRTSKINNTGWR 238

Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           ID+ + S      +  +  I +  R      DHTP+I+ +++
Sbjct: 239 IDYWLTSNRVADKITKSEMIHSGDRQ-----DHTPIILEIEL 275


>gi|227494748|ref|ZP_03925064.1| possible exodeoxyribonuclease III [Actinomyces coleocanis DSM
           15436]
 gi|226831748|gb|EEH64131.1| possible exodeoxyribonuclease III [Actinomyces coleocanis DSM
           15436]
          Length = 273

 Score =  126 bits (316), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 62/269 (23%), Positives = 108/269 (40%), Gaps = 14/269 (5%)

Query: 6   VATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDK---NFPFETLQSLNYHIETCG 61
           + T NVN IRA     +A+ + E  PD++ LQE +  DK   +   E  + +NY  E  G
Sbjct: 5   LMTVNVNGIRAAYKRDMASVLAETAPDVLALQEVRANDKILADLMGEDWEMVNYSCEIKG 64

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDD------LDVQARFIEATFTINTQTLRIGNLYLPH 115
           +     +   S +  +   +   G             R++E       +T+ + + YL  
Sbjct: 65  RAGVAVLVRRSSHVELLADSARFGAPEGGDKVPVDTGRWLEVDVVDGDRTVTVISAYLHS 124

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND-AC 174
           G  + + K D K + +K      ++ +   +  +  GD NI+    D  N     N  A 
Sbjct: 125 GE-LGTEKMDQKYAHLKLVTERMAEIVASGKHAVVVGDLNIVRSEKDIKNWKGNHNKSAG 183

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATH--DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
              E         + G+TD  R  H  +    Y++W +   S+  + G RID+ + + E 
Sbjct: 184 VMDEEIAYVDGWMSSGWTDISRQLHGAEQQGPYTWWSWRGKSFDNDAGWRIDYQLATAEL 243

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
            +   S  +D       + SDH P+ V  
Sbjct: 244 AATATSCVVDRADAYEKRFSDHAPLRVHY 272


>gi|212274573|ref|NP_001130149.1| hypothetical protein LOC100191243 [Zea mays]
 gi|194688404|gb|ACF78286.1| unknown [Zea mays]
          Length = 323

 Score =  126 bits (316), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 69/270 (25%), Positives = 118/270 (43%), Gaps = 19/270 (7%)

Query: 2   SVVTVATWNVNSIRARIH-NL--AAWIKENNPDIICLQETKTEDKNFPF--ETLQSLNYH 56
           + + + +WNVN ++A +         +   N D++CLQET  E++N       +   +Y 
Sbjct: 65  NSMKILSWNVNGLQAIVQSGFSADELVARENFDVLCLQETHLEERNVDLFKNLVHEYDYT 124

Query: 57  IETCGQKS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
             +C      Y+G A++S+ QPI +   L   + D + R I   F        + N Y+P
Sbjct: 125 CWSCSVARLGYSGTAVISRVQPISVQYGLGIPEHDQEGRLITLEFD----DFYLVNAYVP 180

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
           +       + + +I+          ++LE  +P+I AGD N   Q  D +NP      A 
Sbjct: 181 NSG-RGLRRLNYRINDWDPCFSDFIKKLECSKPVIVAGDLNCARQSIDIHNPQAKTEAAG 239

Query: 175 FTLEVRQSFQKLQNMG-FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
           FT+E R+SF+   +     D  R  H     Y+FW    +    NKG R+D+ + S    
Sbjct: 240 FTIEERESFEVNFSRKGLVDTFRKQHPNAVAYTFWG--ENQRITNKGWRLDYFLASESIA 297

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             +H +            SDH+P+ + L +
Sbjct: 298 DKVHDSYTLPDV----ALSDHSPIGLLLKL 323


>gi|192360058|ref|YP_001983982.1| catabolite repression control protein [Cellvibrio japonicus
           Ueda107]
 gi|190686223|gb|ACE83901.1| catabolite repression control protein [Cellvibrio japonicus
           Ueda107]
          Length = 256

 Score =  126 bits (316), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 59/264 (22%), Positives = 104/264 (39%), Gaps = 14/264 (5%)

Query: 4   VTVATWNVNSI-RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + V + +V+ I +A    L  W+   + D ICLQ+ +  ++       +   Y+      
Sbjct: 1   MRVISLSVDGIFQAAQRGLYTWLASQDADFICLQDLRALERELEKPEFELKGYNAYFFDS 60

Query: 62  -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
             K YNGVAI ++ QP  ++                    ++ + L IG+L  P  +   
Sbjct: 61  GTKHYNGVAIYTRLQPKALIYG---LGFASGVDMEGRYLQVDFEQLSIGSLLAPSASSEL 117

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
               + KI +   F     +        +F G++ +   P D  N    ++++ F    R
Sbjct: 118 -ESQEVKIKFFDDFQAHLDKITRKRREYVFCGNWQMAHTPKDVSNSTENQHNSGFLPHER 176

Query: 181 QSFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           Q   +L N  G+ DA R  +     YS+W   + +  +  G R D  ++S      +  A
Sbjct: 177 QWLSQLFNQIGYVDAFRKVNKDADEYSWWP--SGAKGEGDGWRTDFQVVSNSLGHKVEYA 234

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
            I        + S H PVI+  DI
Sbjct: 235 TIYK----TQQFSSHLPVIIDYDI 254


>gi|25011656|ref|NP_736051.1| hypothetical protein gbs1616 [Streptococcus agalactiae NEM316]
 gi|77413444|ref|ZP_00789636.1| exodeoxyribonuclease III [Streptococcus agalactiae 515]
 gi|24413196|emb|CAD47275.1| Unknown [Streptococcus agalactiae NEM316]
 gi|77160538|gb|EAO71657.1| exodeoxyribonuclease III [Streptococcus agalactiae 515]
          Length = 275

 Score =  126 bits (316), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 66/282 (23%), Positives = 108/282 (38%), Gaps = 29/282 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + + +WN++S+ A +            +   +   + DII +QETK   K    + L+ L
Sbjct: 1   MKLISWNIDSLNAALTSESTRALMSRQVIDTLVAEDADIIAIQETKLSAKGPTKKHLEVL 60

Query: 54  N-YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL------ 106
             Y  E       +       Y     +     + +         T   N   +      
Sbjct: 61  ETYFPEYDLVWRSSVEPARKGYAGTMFLYRKGLNPIVSFPEIDAPTTMDNEGRIITLELE 120

Query: 107 --RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
              I  +Y P+         D +I  I          L+ ++P++  GDYN+  +  D  
Sbjct: 121 NCYITQVYTPNAGDGLKRLGDRQIWDI--KYAEYLATLDSQKPVLATGDYNVAHKEIDLA 178

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIR 222
           NP      A FT E RQ F  L   GFTD  R  H D  ++YS+W   +  S   N G R
Sbjct: 179 NPSSNRRSAGFTDEERQGFTNLLAKGFTDTFRYLHGDVPNVYSWWAQRSRTSKINNTGWR 238

Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           ID+ + S      +  +  I +  R      DHTP+I+ +++
Sbjct: 239 IDYWLTSNRVADKITKSEMIHSGDRQ-----DHTPIILEIEL 275


>gi|170016857|ref|YP_001727776.1| exodeoxyribonuclease III [Leuconostoc citreum KM20]
 gi|169803714|gb|ACA82332.1| Exodeoxyribonuclease III [Leuconostoc citreum KM20]
          Length = 274

 Score =  126 bits (316), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 64/281 (22%), Positives = 112/281 (39%), Gaps = 30/281 (10%)

Query: 4   VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTED-------KNFP 46
           + + +WN++SI A + +          +   I    PDI  +QETK +            
Sbjct: 1   MQLISWNIDSINAAVEHKSARGEMTWDVLNQIAARQPDIFAIQETKLKAVGLTKKQAQTI 60

Query: 47  FETLQSLN-YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT 105
            +     + Y   +  +  Y+G  +LS+ +P+ +   +     D+       T       
Sbjct: 61  TDLFPDYHIYTNSSTARSGYSGTMMLSRQEPLSVDYPIINAPGDMDLEGRIITLEFENYY 120

Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165
           +                   ++        R   Q L+ ++P+IF+GD N+  +  D  N
Sbjct: 121 VSTVYTPNSGSGLARL----EERGAWDDAYRAYIQALDAQKPVIFSGDMNVAHEEIDLKN 176

Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYAD-SWSKNKGIRI 223
           P    N A FT + R+ F  L   GFTD +R+ +     LY++W   +  S   N G RI
Sbjct: 177 PKTNHNSAGFTDQEREKFSALLRAGFTDTMRSQYPEQTGLYTWWAQISKTSKINNSGWRI 236

Query: 224 DHIMLSPEATSLLH-SARIDTKPRGWTKPSDHTPVIVSLDI 263
           D+ ++S      +  +A IDT  R      DH P+ + + I
Sbjct: 237 DYYLVSERLAPKVKTTAVIDTGLRQ-----DHAPITLEITI 272


>gi|148675569|gb|EDL07516.1| apurinic/apyrimidinic endonuclease 2, isoform CRA_d [Mus musculus]
          Length = 530

 Score =  126 bits (316), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 57/343 (16%), Positives = 101/343 (29%), Gaps = 70/343 (20%)

Query: 2   SVVTVATWNVNSIRARIHNLA------------AWIKENNPDIICLQETKTEDKNFPFET 49
            ++ V +WN+N IR+ +  LA              + E + DI+CLQETK          
Sbjct: 7   KMLRVVSWNINGIRSPLQGLACQEPSSCPTALRRVLDELDADIVCLQETKVTRDVLTEPL 66

Query: 50  LQSLNYHIETCGQKSYNGVAILSKYQP-------------------------IEIVTHLP 84
                Y+      +S +G +  S   P                         +       
Sbjct: 67  AIVEGYNSYFSFSRSRSGYSECSCPSPGVATFCKDSATPVAAEEGLSGVFATLNGDIGCY 126

Query: 85  GDDLDVQA---------------RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKIS 129
           G+  +                  +    T     +TL + N+Y PH +P    +   K+ 
Sbjct: 127 GNMDEFTQEELRVLDSEGRALLTQHKIRTLEGKEKTLTLINVYCPHADPGKPERLTFKMR 186

Query: 130 WIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY-----------NPIIWENDACFTLE 178
           + +     A   L     +I  GD N   +P D                 W +       
Sbjct: 187 FYRLLQMRAEALLAAGSHVIILGDLNTAHRPIDHCDASSLECFEEDPGRKWMDGLLSNPG 246

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT-SLLH 237
                     M     +         ++ W   + +   N G R+D+++           
Sbjct: 247 DEAGPHIGLFMDSYRYL--HPKQQRAFTCWSVVSGARHLNYGSRLDYVLGDRALVIDTFQ 304

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
           ++ +  +  G    SDH PV   L++     KQ  +      P
Sbjct: 305 ASFLLPEVMG----SDHCPVGAVLNVSCVPAKQCPALCTRFLP 343


>gi|302762180|ref|XP_002964512.1| hypothetical protein SELMODRAFT_81439 [Selaginella moellendorffii]
 gi|300168241|gb|EFJ34845.1| hypothetical protein SELMODRAFT_81439 [Selaginella moellendorffii]
          Length = 540

 Score =  126 bits (316), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 65/359 (18%), Positives = 109/359 (30%), Gaps = 82/359 (22%)

Query: 4   VTVATWNVNSIRARI---HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           + + ++NVN +RAR+    +L A++   + DIICLQETK   +    +      Y     
Sbjct: 1   MRIVSYNVNGLRARLSPARSLRAFLDSLDADIICLQETKIRRQELTADIATPQGYESFIS 60

Query: 61  GQKS-------YNGVAILSKYQP-----------------IEIVTHLPGDDLDVQARFIE 96
             ++       Y+GVA   K +                  +       GD       +  
Sbjct: 61  CTRTVKKGRLGYSGVATFCKVECGNNVALPVAAEEGFTGLLTSARAGEGDKEFWLGSYDP 120

Query: 97  -------------------ATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF 137
                                   +     + N+Y P+     + + D K+++ K     
Sbjct: 121 VLTVEGFTRQELLDLDNEGRCIVTDHGHFVLFNIYGPNVGCGDAERQDFKLNFYKVLQCR 180

Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA 197
               L+    +I  GD NI P P D  +P    + +      R                 
Sbjct: 181 LESILKQGRRIIIVGDLNISPYPIDSCDPGPEFDTSPSRQWFRSLLVSEGGAFSDAFRVF 240

Query: 198 THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS------------------- 238
             +    Y+ W   + +   N G RIDH++++        S                   
Sbjct: 241 HPERAEAYTCWSQASGAEEFNYGSRIDHVLIAGPCAGHCQSPDGSHDNSSCDGFAKCGTD 300

Query: 239 -ARI---------DTKPRGWTK------PSDHTPVIVSLD-IPEPRKKQQDSTSQNMKP 280
              I         DT PR           SDH PVI+ L  +P     +    +    P
Sbjct: 301 MCDILLEFKRAKLDTLPRWSGGRSLKLDGSDHAPVILQLKHLPSIPPHEAPQLAARFMP 359


>gi|26354044|dbj|BAC40652.1| unnamed protein product [Mus musculus]
 gi|123223480|emb|CAM21422.1| apurinic/apyrimidinic endonuclease 2 [Mus musculus]
          Length = 523

 Score =  126 bits (315), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 57/342 (16%), Positives = 101/342 (29%), Gaps = 70/342 (20%)

Query: 3   VVTVATWNVNSIRARIHNLA------------AWIKENNPDIICLQETKTEDKNFPFETL 50
           ++ V +WN+N IR+ +  LA              + E + DI+CLQETK           
Sbjct: 1   MLRVVSWNINGIRSPLQGLACQEPSSCPTALRRVLDELDADIVCLQETKVTRDVLTEPLA 60

Query: 51  QSLNYHIETCGQKSYNGVAILSKYQP-------------------------IEIVTHLPG 85
               Y+      +S +G +  S   P                         +       G
Sbjct: 61  IVEGYNSYFSFSRSRSGYSECSCPSPGVATFCKDSATPVAAEEGLSGVFATLNGDIGCYG 120

Query: 86  DDLDVQA---------------RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISW 130
           +  +                  +    T     +TL + N+Y PH +P    +   K+ +
Sbjct: 121 NMDEFTQEELRVLDSEGRALLTQHKIRTLEGKEKTLTLINVYCPHADPGKPERLTFKMRF 180

Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY-----------NPIIWENDACFTLEV 179
            +     A   L     +I  GD N   +P D                 W +        
Sbjct: 181 YRLLQMRAEALLAAGSHVIILGDLNTAHRPIDHCDASSLECFEEDPGRKWMDGLLSNPGD 240

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT-SLLHS 238
                    M     +         ++ W   + +   N G R+D+++           +
Sbjct: 241 EAGPHIGLFMDSYRYL--HPKQQRAFTCWSVVSGARHLNYGSRLDYVLGDRALVIDTFQA 298

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
           + +  +  G    SDH PV   L++     KQ  +      P
Sbjct: 299 SFLLPEVMG----SDHCPVGAVLNVSCVPAKQCPALCTRFLP 336


>gi|315221911|ref|ZP_07863822.1| exodeoxyribonuclease III [Streptococcus anginosus F0211]
 gi|315188877|gb|EFU22581.1| exodeoxyribonuclease III [Streptococcus anginosus F0211]
          Length = 275

 Score =  126 bits (315), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 58/282 (20%), Positives = 102/282 (36%), Gaps = 29/282 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDK-------NFP 46
           + + +WN++S+ A +            +   +   + DII +QETK              
Sbjct: 1   MKLISWNIDSLNAALTSDSARAQLSQAVLQTLVRLDADIIAIQETKLSANGPTKKHLKVL 60

Query: 47  FETLQSLN--YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
            E        +       +      +    + +      P               T+   
Sbjct: 61  DELFPHYETTWRSSIEPARKGYAGTMFLYKENLSPKITFPEIGAPSTMDSEGRIITLEFD 120

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
              +  +Y P+         D +I    +        L++E+P++  GDYN+     D  
Sbjct: 121 NFFVTQVYTPNAGDGLKRLEDRQIWD--KKYADYLTALDIEKPVLATGDYNVAHNEIDLA 178

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIR 222
           +P        FT E R  F  L N GFTD  R  H D  ++YS+W   +  S   N G R
Sbjct: 179 HPSSNRRSPGFTDEERSGFTNLLNRGFTDTFRYIHGDIPNVYSWWAQRSKTSKINNSGWR 238

Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           ID+ + S      +  +  ID+  R      DHTP+++ +++
Sbjct: 239 IDYWLTSNRIADKVTKSEMIDSGTRQ-----DHTPIVLEIEL 275


>gi|296110636|ref|YP_003621017.1| exodeoxyribonuclease A [Leuconostoc kimchii IMSNU 11154]
 gi|295832167|gb|ADG40048.1| exodeoxyribonuclease A [Leuconostoc kimchii IMSNU 11154]
          Length = 272

 Score =  126 bits (315), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 65/281 (23%), Positives = 115/281 (40%), Gaps = 30/281 (10%)

Query: 4   VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPF------ 47
           + + +WN++SI A I +          +   I    PDI  +QETK +            
Sbjct: 1   MQLISWNIDSINAAIQHQSARGEMTWDVLNKIAARKPDIFAIQETKLKPTGLTKKQAAAL 60

Query: 48  -ETLQSLNYHIETCG-QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT 105
            +     + ++ +   +  Y+G   LS+ +P+E+    P               T+  + 
Sbjct: 61  SDLFPDYHIYVNSSTARPGYSGTMFLSRNEPLEVT--FPKISAPDTMDIEGRIITLEFED 118

Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165
             +  +Y P+     +   D          R   Q L+ ++P+IF+GD N+  Q  D  N
Sbjct: 119 FYVSTVYTPNSGSGLARLDDRG--AWDDAYRSYLQGLDNKKPVIFSGDMNVAHQEIDLKN 176

Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYAD-SWSKNKGIRI 223
                + A FT   R+ F  L   GFTD +R  +     +Y++W   +  S   N G RI
Sbjct: 177 FKTNHHSAGFTDPEREKFSALLEAGFTDTLRMKNPDTPGIYTWWAQISKTSKINNSGWRI 236

Query: 224 DHIMLSPEATSLLHSA-RIDTKPRGWTKPSDHTPVIVSLDI 263
           D+ ++S    + +  +  IDT  R      DH P+ + ++I
Sbjct: 237 DYYLVSNRLAAKVSDSHVIDTGLRQ-----DHAPIALEINI 272


>gi|282897120|ref|ZP_06305122.1| Exodeoxyribonuclease III xth [Raphidiopsis brookii D9]
 gi|281197772|gb|EFA72666.1| Exodeoxyribonuclease III xth [Raphidiopsis brookii D9]
          Length = 221

 Score =  126 bits (315), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 65/198 (32%), Positives = 108/198 (54%), Gaps = 2/198 (1%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSIR R+  + +W+ ENN D++CLQETK  D++FP      + YH    GQK
Sbjct: 1   MKIATWNVNSIRTRLEQVISWLGENNVDVLCLQETKVIDRDFPLTVFHDVGYHTYIYGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT--QTLRIGNLYLPHGNPITS 121
           +YNGVA++S+     + T       +++  + +    I      +RI NLY+P+G+ + S
Sbjct: 61  AYNGVALISRQPMKSVSTGFCQVLENLEPEWDDQKRVITGIVDEVRIINLYVPNGSAVGS 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            KY  K+ W+     +    L+    +I  GD+NI  +  D Y  +  +N    +L  R+
Sbjct: 121 EKYQYKLQWLAVLKTYLEVLLKSNSHIIMCGDFNIALEDIDIYKQVDTKNQIMASLPERE 180

Query: 182 SFQKLQNMGFTDAIRATH 199
           + +++ N+GF D  R  +
Sbjct: 181 ALREILNLGFGDGFRKFN 198


>gi|22537705|ref|NP_688556.1| exodeoxyribonuclease [Streptococcus agalactiae 2603V/R]
 gi|76788417|ref|YP_330186.1| exodeoxyribonuclease III [Streptococcus agalactiae A909]
 gi|76799526|ref|ZP_00781659.1| exodeoxyribonuclease III [Streptococcus agalactiae 18RS21]
 gi|77408314|ref|ZP_00785056.1| exodeoxyribonuclease III [Streptococcus agalactiae COH1]
 gi|22534594|gb|AAN00429.1|AE014263_8 exodeoxyribonuclease [Streptococcus agalactiae 2603V/R]
 gi|76563474|gb|ABA46058.1| exodeoxyribonuclease III [Streptococcus agalactiae A909]
 gi|76585123|gb|EAO61748.1| exodeoxyribonuclease III [Streptococcus agalactiae 18RS21]
 gi|77173077|gb|EAO76204.1| exodeoxyribonuclease III [Streptococcus agalactiae COH1]
          Length = 275

 Score =  126 bits (315), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 62/280 (22%), Positives = 102/280 (36%), Gaps = 25/280 (8%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + + +WN++S+ A +            +   +   + DII +QETK   K    + L+ L
Sbjct: 1   MKLISWNIDSLNAALTSESTRALMSRQVIDTLVAEDADIIAIQETKLSAKGPTKKHLEVL 60

Query: 54  N-YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL------ 106
             Y  E       +       Y     +     + +         T   N   +      
Sbjct: 61  ETYFPEYDLVWRSSVEPARKGYAGTMFLYRKGLNPIVSFPEIDAPTTMDNEGRIITLELE 120

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
                 +   N     K                  L+ ++P++  GDYN+  +  D  NP
Sbjct: 121 NCYITQVYTPNAGDGLKRLADRQIWDIKYAEYLATLDSQKPVLATGDYNVAHKEIDLANP 180

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIRID 224
                 A FT E RQ F  L   GFTD  R  H D  ++YS+W   +  S   N G RID
Sbjct: 181 SSNRRSAGFTAEERQGFTNLLAKGFTDTFRYLHGDVPNVYSWWAQRSRTSKINNTGWRID 240

Query: 225 HIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           + + S      +  +  I +  R      DHTP+I+ +++
Sbjct: 241 YWLTSNRVADKITKSEMIHSGDRQ-----DHTPIILEIEL 275


>gi|325845494|ref|ZP_08168785.1| exodeoxyribonuclease III [Turicibacter sp. HGF1]
 gi|325488513|gb|EGC90931.1| exodeoxyribonuclease III [Turicibacter sp. HGF1]
          Length = 215

 Score =  125 bits (314), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 57/220 (25%), Positives = 100/220 (45%), Gaps = 9/220 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +      +++   PD +C+QETK ++     + L     +     +
Sbjct: 1   MKFISWNVNGLRACVKKGFLDFVEAEQPDFLCVQETKLQEGQIDLQ-LDGYYQYWNYAVK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K++P+++   L   + D + R I   +        +  +Y P+     + 
Sbjct: 60  KGYSGTAIFTKHEPLQVTYGLNIAEHDQEGRVITLEY----NDFYLVTVYTPNSQNELAR 115

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
              D     +   R     L++ +P+I  GD N+  Q  D  NP     +A FT+E R  
Sbjct: 116 L--DYRLTWEEAFRNYLIGLDVLKPVIVCGDLNVAHQQIDLKNPKTNTKNAGFTIEERNE 173

Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGI 221
             KL N GF D  R  +    + YS+W Y A + +K + +
Sbjct: 174 MTKLLNSGFIDTFRYFYPTKENCYSWWSYRAGARAKKRWM 213


>gi|227432019|ref|ZP_03914038.1| exodeoxyribonuclease III [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
 gi|227352217|gb|EEJ42424.1| exodeoxyribonuclease III [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
          Length = 285

 Score =  125 bits (313), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 67/281 (23%), Positives = 115/281 (40%), Gaps = 30/281 (10%)

Query: 4   VTVATWNVNSIRARIHNL-----AAW-----IKENNPDIICLQETKTEDKNFPF------ 47
           +   +WN++SI A + +        W     I    PD+  +QETK +            
Sbjct: 14  LKFISWNIDSINAAVEHKSVRGEMTWSTLNEIATIRPDVFAIQETKLKSTGLTKKQATAI 73

Query: 48  -ETLQSLNYHIETCG-QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT 105
            E     + ++ +   +  Y+G  +LSK +PI++     G    +       T    T  
Sbjct: 74  AELFPEYHLYVNSSTARSGYSGTMVLSKVEPIQVEYPTIGAPGPMDLEGRIITLEFPTFF 133

Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165
           L          + I       +        R   +RL+  +P+IF+GD N+  Q  D  N
Sbjct: 134 LSTVYTPNSGSSLIRLP----ERGEWDDKYREYIKRLDATKPVIFSGDMNVAHQEIDLKN 189

Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYAD-SWSKNKGIRI 223
           P    + A FT + R+ F  L + GFTD  R+ +     +Y++W   +  S   N G RI
Sbjct: 190 PKPNRHSAGFTDQEREKFSALLDAGFTDTFRSLNPDTPSVYTWWAQISKTSKINNSGWRI 249

Query: 224 DHIMLSPEATSLLH-SARIDTKPRGWTKPSDHTPVIVSLDI 263
           D+ ++S      +  S  IDT  R      DH P+++ +++
Sbjct: 250 DYYLVSDRIAENVTESCVIDTGARQ-----DHAPILLEINV 285


>gi|307596055|ref|YP_003902372.1| exodeoxyribonuclease III Xth [Vulcanisaeta distributa DSM 14429]
 gi|307551256|gb|ADN51321.1| exodeoxyribonuclease III Xth [Vulcanisaeta distributa DSM 14429]
          Length = 246

 Score =  125 bits (313), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 62/262 (23%), Positives = 108/262 (41%), Gaps = 22/262 (8%)

Query: 4   VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + +WNVN +R+  R  +L   +   N D++ LQE ++   + P  T+  L Y      
Sbjct: 1   MRIVSWNVNGLRSIMRKGSLDRLLSMGNYDVVLLQEIRSS-GDVPL-TIMGLGYEAYPFP 58

Query: 62  --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y GV  L+K +PI ++  L   + D + R I        +   +   +   G+ +
Sbjct: 59  AERKGYAGVMTLTKVKPISVIKGLGIKEFDAEGRVITVE---FNEFYVVNAYFPRAGDDL 115

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
           +   +                 L   +P+I  GD+NI     D  +    E     T E 
Sbjct: 116 SRLGFKISFCGAIEKF---LNELRSRKPVIVCGDFNIARDRLD--SSFWDEKHPGLTPEE 170

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R    +L   GF DA R  H    ++++  Y     +    +RID+ M+S E    +  A
Sbjct: 171 RAWLSQLIKDGFIDAFRELHPNARVFTWRSYKERWRA----MRIDYCMVSEELRGKVIKA 226

Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261
            + +   G    SDH PV++ +
Sbjct: 227 EVLSDVEG----SDHVPVMIEI 244


>gi|312866373|ref|ZP_07726591.1| exodeoxyribonuclease III [Streptococcus downei F0415]
 gi|311098067|gb|EFQ56293.1| exodeoxyribonuclease III [Streptococcus downei F0415]
          Length = 276

 Score =  124 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 61/284 (21%), Positives = 104/284 (36%), Gaps = 32/284 (11%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDK---NFPFETL 50
           + + +WN++S+ A +            +   + E + DII +QETK   K         L
Sbjct: 1   MKLISWNIDSLNAALTSDSARAQLSRQVIDSLVEQDADIIAIQETKLSAKGPTKKHLALL 60

Query: 51  QSL--NYHIETCGQKSYNG------VAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN 102
           +    +Y I                + +     P   +T+   D                
Sbjct: 61  EDYFPDYQIAWRSSVEPARKGYAGTMFLYKNSLPEPTITYPEIDAPSTMDDEGRIITLEF 120

Query: 103 TQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD 162
            +           G+ +   +                  L+ ++P++ +GDYN+  +  D
Sbjct: 121 DKFFVTQVYTPNAGDGLRRLEERQIWDQKYADY---LVGLDQQKPVLASGDYNVAHKEID 177

Query: 163 CYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKG 220
             NP        FT E RQ F  L + GFTD  R  H D  ++YS+W   +  S   N G
Sbjct: 178 LANPTSNRRSPGFTDEERQGFTNLLDKGFTDTFRYMHGDIPNVYSWWAQRSKTSKINNTG 237

Query: 221 IRIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
            RID+ + S      +  +  ID+  R      DH P+++ +DI
Sbjct: 238 WRIDYWLTSNRIADKISKSDMIDSGSRQ-----DHGPILLEIDI 276


>gi|227549936|ref|ZP_03979985.1| possible exodeoxyribonuclease III [Corynebacterium lipophiloflavum
           DSM 44291]
 gi|227077952|gb|EEI15915.1| possible exodeoxyribonuclease III [Corynebacterium lipophiloflavum
           DSM 44291]
          Length = 303

 Score =  124 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 57/310 (18%), Positives = 104/310 (33%), Gaps = 57/310 (18%)

Query: 1   MSVVTVATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKNFP--FETLQ 51
           MS +T+A+ NVN IRA           + AW++    D++ +QE +              
Sbjct: 1   MS-LTIASVNVNGIRAATKVRNELNPGMLAWLETTTADVVLMQEVRASVDQARAVLAPAL 59

Query: 52  SLNYH-----IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
              +H      E  G K   GV ILS+ Q  ++   +   +                  +
Sbjct: 60  EAGWHLVVAPAEAPGAKGRAGVGILSRSQLEDVEIGITSFED------SGRFIAGTLDDV 113

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
           R+ +LYLP G+   + K D+K  ++  F             ++  GD+NI  +  D  N 
Sbjct: 114 RVASLYLPSGS-AGTEKQDEKYRFLDSFEPLLESWASEHPNMVIGGDWNICHRREDLKNW 172

Query: 167 IIWENDACFTLEVRQSFQKLQ-----------------------------------NMGF 191
                 + F  + R     +                                    +  +
Sbjct: 173 KTNHKKSGFLPDERAFMDAVFGVFPDDEAQDLEAKSLHSWAGAVDYASTGRRQANADPKW 232

Query: 192 TDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP 251
            D  R        Y++W +   +++ + G RID    +           ++  P    + 
Sbjct: 233 FDVARRLEPESAPYTWWTFRGQAFNNDAGWRIDVQAATAAMLERAQHTWVEKVPTVEQRW 292

Query: 252 SDHTPVIVSL 261
           SDH+P++V  
Sbjct: 293 SDHSPLMVEY 302


>gi|302837660|ref|XP_002950389.1| hypothetical protein VOLCADRAFT_104648 [Volvox carteri f.
           nagariensis]
 gi|300264394|gb|EFJ48590.1| hypothetical protein VOLCADRAFT_104648 [Volvox carteri f.
           nagariensis]
          Length = 1732

 Score =  124 bits (312), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 53/293 (18%), Positives = 104/293 (35%), Gaps = 20/293 (6%)

Query: 3   VVTVATWNVNSI----R---ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55
           V+ +  WN+N +    R    R  +   ++     DI C QE K        E      +
Sbjct: 18  VLNIMCWNINCLTPTVRNMELRHKSFRGFMDHLQLDIACFQEVKLPAARITRELACVEGF 77

Query: 56  HIETCGQKSYNGVAILSKYQPIEI-------VTHLPGDDLDVQARFIEATFTINTQTLRI 108
                   S  G + ++ +            V  L GD+            T +   + +
Sbjct: 78  QSFWASSTSKPGYSGVTTWCRTATAAPRDAAVDCLGGDERPELDTEGRFVLTDHGAFVLL 137

Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168
                  G+     +   K+++++       +   L   ++  GD NI  +  D +  + 
Sbjct: 138 NVYVPNAGDRPERARLPYKLAFLRALRTKMDELTALGRQVVLVGDLNIAAERRDVHPTLD 197

Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIM 227
           ++       +   +        + D  R  H      Y+ WD    + + N G+RID+++
Sbjct: 198 FD---SMYDKQELAELSGLIAAYPDVWRHLHPDTEGSYTVWDERTSARAFNTGLRIDYVL 254

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
           +SP     + S  I T      K SDH  ++++L +   R  + +S S+   P
Sbjct: 255 VSPGLLPYVQSCEILTAAAIPPKWSDHAAILLTLRV--QRAVEPESASEQALP 305


>gi|326538608|gb|ADZ86823.1| exodeoxyribonuclease III Xth [Brucella melitensis M5-90]
          Length = 198

 Score =  124 bits (311), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 102/185 (55%), Positives = 133/185 (71%)

Query: 79  IVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFA 138
           I   LPGDD D QARFIE  ++ +T  +R+ +LYLP+GNPI + K+  K+SW++R   +A
Sbjct: 14  INKGLPGDDSDEQARFIEGIYSTDTGVVRVVSLYLPNGNPIDTEKFPYKLSWMQRLENWA 73

Query: 139 SQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT 198
            +RL LEEPL+ AGDYN+IP+P D  NP  W  DA F  + RQ+F++L+N+GFTDAIRA+
Sbjct: 74  KKRLTLEEPLVLAGDYNVIPEPVDARNPQAWLGDALFQPQSRQAFRRLENLGFTDAIRAS 133

Query: 199 HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVI 258
            D   +YSFWDY A +W KN GIRIDH+MLSPEAT+   SA I+   R W KPSDH PV 
Sbjct: 134 TDESGVYSFWDYQAGAWQKNNGIRIDHLMLSPEATNRFISANIEKHVRAWEKPSDHVPVT 193

Query: 259 VSLDI 263
           V+L +
Sbjct: 194 VTLAV 198


>gi|222619409|gb|EEE55541.1| hypothetical protein OsJ_03775 [Oryza sativa Japonica Group]
          Length = 360

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 64/280 (22%), Positives = 111/280 (39%), Gaps = 33/280 (11%)

Query: 4   VTVATWNVNSIRARI--HNL--AAWIKENNPDIICLQETKTED----------------- 42
           + + +WN+N +   +           +  N D++CLQET  E                  
Sbjct: 51  MKILSWNINGLHDVVTTKGFSARDLAQRENFDVLCLQETHLEASLGVSAIRLLIYTEKDV 110

Query: 43  KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN 102
           + F        +Y   +  +  Y+G A++S+ +PI +   +   + D + R I   F   
Sbjct: 111 EKFKNLIADYDSYWSCSVSRLGYSGTAVISRVKPISVQYGIGIREHDHEGRVITLEFDG- 169

Query: 103 TQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD 162
                + N Y+P+         + +++          + LE  +P+I AGD N   Q  D
Sbjct: 170 ---FYLVNAYVPNSGRFLRR-LNYRVNNWDPCFSNYVKILEKSKPVIVAGDLNCARQSID 225

Query: 163 CYNPIIWENDACFTLEVRQSFQKLQNMG-FTDAIRATHDTHHLYSFWDYYADSWSKNKGI 221
            +NP      A FT+E R+SF+   +     D  R  H     Y+FW    +    NKG 
Sbjct: 226 IHNPPAKTKSAGFTIEERESFETNFSSKGLVDTFRKQHPNAVGYTFWG--ENQRITNKGW 283

Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           R+D+ + S   T  +H + I          SDH+P+ +  
Sbjct: 284 RLDYFLASESITDKVHDSYILPDV----SFSDHSPIGLVF 319


>gi|253746967|gb|EET01931.1| Endonuclease/Exonuclease/phosphatase [Giardia intestinalis ATCC
           50581]
          Length = 322

 Score =  123 bits (308), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 60/284 (21%), Positives = 102/284 (35%), Gaps = 29/284 (10%)

Query: 4   VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL--------- 53
           +T+   NVN IR+     L ++I   +PDIIC  ETK     F     +           
Sbjct: 39  LTILAVNVNGIRSAFSKGLKSFIHSKDPDIICFSETKLGSSAFAEFMEKEAVINPETGVH 98

Query: 54  ----NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRI 108
                Y    C   +  G A  + +    I        +       E  F  I+  T  +
Sbjct: 99  TVIKGYRHAFCCSTARQGYASTAIFVKESIPVLSLCTQMGEPEFDSEGRFLHISLPTFEL 158

Query: 109 GNLYLPHGNP----------ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP 158
            ++Y+P+                     +I + +   ++    +   + +++ GD N+  
Sbjct: 159 IHVYVPNSGRGSTGRPFTSENKPANLPTRIKYEELIFKYIGDLIAAGKDVVYCGDLNVAH 218

Query: 159 QPHDCYNPIIWENDACFTLEVRQSFQKL-QNMGFTDAIRATHDTHHLYSFWDYYADSWSK 217
              D YNP        FT E R +F KL  + G  D  R  H     +S++  +  +   
Sbjct: 219 NEIDLYNPRNNHFSPGFTDEERSAFSKLLDDHGLIDVFRTMHPQLVKFSWFSNFGRARQH 278

Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
             G RID+ +++ E    +    I          SDH P+I+ L
Sbjct: 279 KHGWRIDYFVVTYEIFKRVTMVNILDD---HNTYSDHVPIIMRL 319


>gi|325967886|ref|YP_004244078.1| exonuclease [Vulcanisaeta moutnovskia 768-28]
 gi|323707089|gb|ADY00576.1| exonuclease [Vulcanisaeta moutnovskia 768-28]
          Length = 246

 Score =  123 bits (308), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 62/261 (23%), Positives = 109/261 (41%), Gaps = 22/261 (8%)

Query: 4   VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + +WN+N +R+  R  +L   +  +N D++ LQE ++   + P   +  L Y      
Sbjct: 1   MRIVSWNINGLRSIMRKSSLDKLLSMDNYDMVLLQEIRSS-GDIPLTII-GLGYEAYPFP 58

Query: 62  --QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K Y GV  L+K  PI ++  +  ++LD + R I   F        +   +   G+ +
Sbjct: 59  AIRKGYAGVMTLTKIHPISVIKGIGINELDSEGRIITVEF---NDFYVVNTYFPRAGDDL 115

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
           +   +                 L  ++P+I  GD+NI     D  +    E     TLE 
Sbjct: 116 SRLDFKLSFCGAIEKF---LANLRSKKPIIMCGDFNIARDKID--SSFWDEKHPGLTLEE 170

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R    +    G+ D  R  H    +Y++  Y     +    +RID+ ++S E  S +  A
Sbjct: 171 RAWLNQFLKSGYIDTFRELHPNAKVYTWHSYREKWRA----MRIDYCIVSKELMSKVRKA 226

Query: 240 RIDTKPRGWTKPSDHTPVIVS 260
            I T   G    SDH PV++ 
Sbjct: 227 EILTNIEG----SDHVPVMIE 243


>gi|195996619|ref|XP_002108178.1| hypothetical protein TRIADDRAFT_19413 [Trichoplax adhaerens]
 gi|190588954|gb|EDV28976.1| hypothetical protein TRIADDRAFT_19413 [Trichoplax adhaerens]
          Length = 527

 Score =  122 bits (307), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 53/325 (16%), Positives = 95/325 (29%), Gaps = 57/325 (17%)

Query: 4   VTVATWNVNSIRA------RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57
           + +  WNVN IR        I +L  ++   N DI+C QETK               Y+ 
Sbjct: 1   MKILCWNVNGIRTTAYGKGSIKDLLEFL---NADILCFQETKLLRDQLDESIAFVEGYNS 57

Query: 58  ETCGQKSYNGVA-----ILSKYQPIEIVTHLPGDDLDVQ--------------------- 91
                +     +       +   PI +   L                             
Sbjct: 58  YFSFSRGKVAYSGVATYCKTDCAPIRVEEGLSNVWAAKNADRIGHYGNISKFNSEELSLL 117

Query: 92  ----ARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEP 147
                  +    T   + + + N+Y P  +P    + + K+ + +     A   L   + 
Sbjct: 118 DAEGRAILTEHKTDFGRNVVVINVYCPRADPEKPERLNFKLKFYELLQERAEALLIAGKH 177

Query: 148 LIFAGDYNIIPQPHDCYNP----IIWENDACFTL--------EVRQSFQKLQNMGFTDAI 195
           ++  GD N   +P D   P    +       +          E +          F D+ 
Sbjct: 178 VVIVGDVNTSHKPIDHCEPDIKAMQNSPSCHWLDNLLIPLDSEGKVDSSISAGKKFIDSF 237

Query: 196 RATHDTHHL-YSFWDYYADSWSKNKGIRIDHIMLSPEA-TSLLHSARIDTKPRGWTKPSD 253
           R  +      ++ W     +   N G RID+I+   +   S    ++I  +  G    SD
Sbjct: 238 RYFYPRRKEAFTCWSTVTSARKTNYGTRIDYIIADKDLVVSYFAESQIQPEIEG----SD 293

Query: 254 HTPVIVSLDIPEPRKKQQDSTSQNM 278
           H P+   L        +        
Sbjct: 294 HCPIYADLKFTINPSDKLPWLCTKY 318


>gi|323508160|emb|CBQ68031.1| related to APN2-AP endonuclease, exonuclease III homolog
           [Sporisorium reilianum]
          Length = 737

 Score =  122 bits (307), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 49/307 (15%), Positives = 93/307 (30%), Gaps = 54/307 (17%)

Query: 4   VTVATWNVNSIRARIHN------LAAW---IKENNPDIICLQETKTEDKNF--PFETLQS 52
           + +  WN+N +R  +        L  W   ++    DI C QETK   K    P   L S
Sbjct: 1   MRITVWNINGLRT-LKGYQPWYKLPDWEACLEHLGADIACFQETKMTRKQLTEPMCILPS 59

Query: 53  LNYHIETCGQKSYNGVAILSKY----------------QPIEIVTHLPGDDLDVQARFIE 96
            N        K Y+G     K                     + T+       +     +
Sbjct: 60  YNAFFNFHPAKGYSGTVTYVKKSVSIPLKAEQGITGRLPVTNVSTNPLIPSEPIGCIPAD 119

Query: 97  ATFTINTQTL---------------RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQR 141
               +  Q                       +   N     + + K+++ +     A + 
Sbjct: 120 TRDDVEPQIWNALDDEGRCVVLDLGLFVLFNVYCPNETGPERLEYKMTYYQGLAERAHRL 179

Query: 142 LELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG-------FTDA 194
           ++    ++  GD NII  P D  +      +  +    +   +                 
Sbjct: 180 IQAGRQVMIVGDMNIIRDPIDHCDAEQSMKEYGWDHFHQHPARSWFQTFLAPHGKFHDVG 239

Query: 195 IRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDH 254
                +   +++ W+   D+   N G+R+D+ +++      +  A I     G    SDH
Sbjct: 240 RLYHPERKKMFTCWNTLIDARPANYGVRLDYTLVTEGLLDWIKGADIQPDVYG----SDH 295

Query: 255 TPVIVSL 261
            P+ V L
Sbjct: 296 CPIYVDL 302


>gi|90023311|ref|YP_529138.1| histidine kinase [Saccharophagus degradans 2-40]
 gi|89952911|gb|ABD82926.1| histidine kinase [Saccharophagus degradans 2-40]
          Length = 261

 Score =  122 bits (307), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 61/266 (22%), Positives = 99/266 (37%), Gaps = 14/266 (5%)

Query: 4   VTVATWNVNSI-RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + V + +V+ I +A    L  WI + + DIICLQ+ +  +     +      Y       
Sbjct: 1   MRVISLSVDGIFQAAQRGLYDWIADQDADIICLQDLRALEPELDNDIFHPEGYFAYFFDS 60

Query: 62  -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
             K YNGVAI ++YQP  ++  L           +E  +             L       
Sbjct: 61  GVKHYNGVAIYTRYQPKALIYGLGFSSGVD----MEGRYLQIDFERYSIGTLLAPSAVNP 116

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF-TLEV 179
           +   + KI +   F     +        IF G++N+     D  N    E+ + F   E 
Sbjct: 117 AESQEVKIQFFDDFQALLHKITRKRRNYIFCGNWNMAHTRKDVENWARNEDQSGFLGHEQ 176

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           +   Q  + +G+ DA R        YS+W       +   G R+DH ++S      +  A
Sbjct: 177 QWMNQLFRQLGYADAFRLAVPDAGEYSWWPSGEVGVAD--GWRVDHQVISEGLIKKVEYA 234

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPE 265
            +          S H PVIV  DI +
Sbjct: 235 AMYK----TKTFSSHLPVIVDYDIDD 256


>gi|307579157|gb|ADN63126.1| exodeoxyribonuclease III Xth [Xylella fastidiosa subsp. fastidiosa
           GB514]
          Length = 237

 Score =  122 bits (307), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 65/240 (27%), Gaps = 17/240 (7%)

Query: 33  ICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQA 92
           +C+QE K +             YH+         G + ++ Y   E              
Sbjct: 2   LCVQEIKAQRHQLVGPDFFPAGYHVCFRDATIKKGYSGVAIYSRCEPDELRTTLGWAEFD 61

Query: 93  RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG 152
                          +   +          +   K   ++       + L      +  G
Sbjct: 62  EEGRYVEARFGNLSVV--SFYIPSGSSGEKRQHYKFEVMRWLRPILCEWLLSGRDYVLCG 119

Query: 153 DYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG-----------FTDAIRATHDT 201
           D+NI+    D  N    + ++      R     L               + D  R  H  
Sbjct: 120 DWNIVRSALDIRNWKSNQKNSGCLPLERDWLNGLCADSLHDVNSAQGRGWVDTYRVLHPQ 179

Query: 202 HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
              Y++W     +   N G RID+  +SP     +    I  + R     SDH P  V  
Sbjct: 180 GEDYTWWSNRGAARVNNVGWRIDYQFVSPGLRERVSRCAIYCEQR----FSDHAPYTVEY 235


>gi|302686738|ref|XP_003033049.1| hypothetical protein SCHCODRAFT_81869 [Schizophyllum commune H4-8]
 gi|300106743|gb|EFI98146.1| hypothetical protein SCHCODRAFT_81869 [Schizophyllum commune H4-8]
          Length = 697

 Score =  122 bits (306), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 53/328 (16%), Positives = 96/328 (29%), Gaps = 74/328 (22%)

Query: 4   VTVATWNVNSIRAR--------IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55
           + + TWN+N IR          + +    + + + DIIC QE K+  +N P +      Y
Sbjct: 1   MKIMTWNINGIRTIPQYHPWNGLKSHKDILDKLDADIICFQEMKSSRQNLPKDVAVPPGY 60

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT---------- 105
                      G + ++ Y   +       D L   A    +     +            
Sbjct: 61  TSFFSFPTKKAGYSGVAIYVKDQYTPFKVEDHLCGLANATASDADRISPALSSYPMHRFA 120

Query: 106 ----------------------------LRIGNLYLPHGNPITSTKYDDKISWIKRFLRF 137
                                         + N+Y P+       +   K+ + +     
Sbjct: 121 DLDDDEDDPIDFKSLDAEGRTLVADFGLFVLINVYCPNDGSEAQERMKYKMDFHRMLSVR 180

Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCYN------------------------PIIWENDA 173
               ++    +I  GD N +    D                             ++ +  
Sbjct: 181 VRGLIDEGREVIVVGDLNAVSDVGDHCEGALTVRKIIDEARKEGQEVGEKEAEEMFYDTM 240

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
                +R S  +          R   +   +Y+ W+    + + N G RID I+++P   
Sbjct: 241 PARRWLRDSLVEHGGPLVDVCKRFWPERKGMYTCWNTKISARASNYGARIDFILVTPYLL 300

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSL 261
            L+  A I        K SDH PVIV  
Sbjct: 301 PLIKHADIQPDV----KGSDHCPVIVEF 324


>gi|213405473|ref|XP_002173508.1| DNA-(apurinic or apyrimidinic site) lyase [Schizosaccharomyces
           japonicus yFS275]
 gi|212001555|gb|EEB07215.1| DNA-(apurinic or apyrimidinic site) lyase [Schizosaccharomyces
           japonicus yFS275]
          Length = 554

 Score =  122 bits (306), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 55/308 (17%), Positives = 92/308 (29%), Gaps = 54/308 (17%)

Query: 4   VTVATWNVNSI---------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           + + TWNVN I         R+   +     +  + DIIC+QE K + + FP +      
Sbjct: 1   MRILTWNVNGIQNPFNYGQWRS-KKSYKEVFETLDADIICVQELKAQKQGFPEQFALIEG 59

Query: 55  YHIETCGQKSYNGVAIL------SKYQPIEIVTHLPGDDLDVQARFI------------- 95
           Y           G + +      S   P +    + G        +              
Sbjct: 60  YDAYFTFPLEKKGYSGVGVYVKKSLTVPCKAEEGITGILPVPDRHYCYKDAPEDEQIGYY 119

Query: 96  --------------EATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQR 141
                         E    +    L +        N         ++ +     R     
Sbjct: 120 PVNLDKATERLIDSEGRCILLDFQLFVLIGVYCPVNSGEKRLKFRRLFYNALRDRIIRLT 179

Query: 142 LELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF------TLEVRQSFQKLQNMGFTDAI 195
            E +  +I  GD NI+    D  +    + +            VR   Q        D  
Sbjct: 180 QEAKRNVILLGDINILRDELDTADNKDIQKEQFDESIRESREWVRGMLQPHPEGLLIDTT 239

Query: 196 RATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDH 254
           R  H     +++ W+   ++   N G RID+I +SP     +  A I  +  G    SDH
Sbjct: 240 RHRHPVRRGMFTCWNTRLNTRPTNFGTRIDYICISPALLPWMQDANIMPEIMG----SDH 295

Query: 255 TPVIVSLD 262
            PV +   
Sbjct: 296 CPVFLDFK 303


>gi|229828142|ref|ZP_04454211.1| hypothetical protein GCWU000342_00199 [Shuttleworthia satelles DSM
           14600]
 gi|229792736|gb|EEP28850.1| hypothetical protein GCWU000342_00199 [Shuttleworthia satelles DSM
           14600]
          Length = 277

 Score =  122 bits (305), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 61/284 (21%), Positives = 101/284 (35%), Gaps = 31/284 (10%)

Query: 4   VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDK---NFPFETL 50
           +   +WN++S+ A +            +   I    PD   +QETK  +        E +
Sbjct: 1   MRFISWNIDSLNAALTGTSARAQMSAAVLEKIAGMRPDYFAIQETKLPEAGPNQKQMEII 60

Query: 51  QSL--NYHIETCGQKSYNGVAILSKYQPIEIVTHL------PGDDLDVQARFIEATFTIN 102
           + L  +Y       +                          P               TI 
Sbjct: 61  EKLFSDYDCHYISSRPPARKGYAGVMILARRDAGPVLEVTKPSIGAPDTMDVEGRILTIE 120

Query: 103 TQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD 162
           T       +Y P+         D +              L+  +P+I  GDYN+  +  D
Sbjct: 121 TADFFFTTVYTPNAGDGLRRLDDRQQWD--ARYADYLAGLDARKPVIACGDYNVAHEEID 178

Query: 163 CYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADS-WSKNKG 220
             NP      A FT + R+ F +L + GF D+ R  H D    YS+W     S    N G
Sbjct: 179 LKNPDANHMSAGFTDQEREGFTRLLDRGFADSFRCLHRDLADAYSWWAQRVKSSKINNSG 238

Query: 221 IRIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
            RID+ ++S    + ++S+  ID+  R      DH P+++ +D+
Sbjct: 239 WRIDYFLVSDRILNRVNSSEMIDSGARQ-----DHCPLLLEIDV 277


>gi|224159467|ref|XP_002199909.1| PREDICTED: similar to APEX nuclease, partial [Taeniopygia guttata]
          Length = 235

 Score =  121 bits (304), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 52/241 (21%), Positives = 96/241 (39%), Gaps = 15/241 (6%)

Query: 24  WIKENNPDIICLQETKTEDKNFPFETLQSLN----YHIETCGQKSYNGVAILSKYQPIEI 79
           W++E  PD++CLQETK      P E          +      +  Y+GV +L++ +P+++
Sbjct: 1   WVQEEAPDVLCLQETKCAAAAVPAEVRALPGLPHQFWCSAKDRPGYSGVGLLARSEPLDV 60

Query: 80  VTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFAS 139
              +    +D  A  +            +  +     N        +    +        
Sbjct: 61  TYGIGEGRMDQTAGVMTTEIP------SLFVVCAYVPNAGRGMVALEPRLRLDAAFLQFL 114

Query: 140 QRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH 199
           +RL+  +P++  GD N+     D  +P        FT + R  F +L   GF D+ R  +
Sbjct: 115 RRLDARKPVLLCGDLNVAHADIDLCHPRANRASPGFTPQERDGFSRLLAAGFVDSFRHLY 174

Query: 200 DT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVI 258
                 ++FW Y   + ++N G R+D+ ++S      L  ++I    R     SDH P+ 
Sbjct: 175 PAARGAFTFWTYLGGARARNVGWRLDYAVVSQRLLGALCDSKI----RNTVPGSDHCPIT 230

Query: 259 V 259
            
Sbjct: 231 A 231


>gi|94502050|ref|ZP_01308555.1| Exonuclease III [Oceanobacter sp. RED65]
 gi|94425804|gb|EAT10807.1| Exonuclease III [Oceanobacter sp. RED65]
          Length = 256

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 46/265 (17%), Positives = 105/265 (39%), Gaps = 13/265 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + V   +V+ + A +      WI +++ DI+C+Q  K ++     + L    Y+      
Sbjct: 1   MKVINVHVDGLEAAVKDGFYDWIAQHDADIVCVQNLKAKEYQLSDDVLYPEGYNAYFIDA 60

Query: 63  KSYN--GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           +  N  GVA+++K  P  I+  +  +  D   R+I+A F   +    +  +   H +   
Sbjct: 61  EPDNYAGVAVITKAMPKAIMIGMAFEACDRYGRYIQADFDEVSVGSVMFPIEDEHNSLED 120

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
              +  +      F+    +        IFAG + +  +  D  +    + ++ F  E +
Sbjct: 121 KFAFQQQ------FIEHLQKTKRKRREFIFAGFFGVAHKSIDLSDWKAHQGESGFLPEEQ 174

Query: 181 QSFQKLQN-MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
               ++   + F DA R  +   + ++++     +     G R+D+ + +P     +  A
Sbjct: 175 AFMDQVTGPLEFVDAFREANFGENQFTWYADEESARRNQNGWRLDYQICTPNLRQYVVDA 234

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIP 264
           +ID +     +   H   I+  +  
Sbjct: 235 KIDRERLWGGQ---HAATIIEYEFD 256


>gi|331007424|ref|ZP_08330604.1| Exodeoxyribonuclease III [gamma proteobacterium IMCC1989]
 gi|330418762|gb|EGG93248.1| Exodeoxyribonuclease III [gamma proteobacterium IMCC1989]
          Length = 259

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 59/262 (22%), Positives = 102/262 (38%), Gaps = 13/262 (4%)

Query: 4   VTVATWNVNSI-RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG- 61
           + + + +V+ + +A    L  W+ E + DIICLQ+ +  +     +      Y+      
Sbjct: 1   MRIISLSVDGLHQAAQRGLYDWLAEQDADIICLQDLRCLEYETDDDVFHPKGYNAYFFDS 60

Query: 62  -QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
             K YNGVAI S+  P  ++                    I+   + IG+L  P      
Sbjct: 61  GVKQYNGVAIYSRVIPKALIYG---LGFSSGVDMEGRYLQIDFDHISIGSLLAPSA-FTD 116

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
              ++ K  +        ++        IF G++ + P+  D  NP   +N + F  E +
Sbjct: 117 IESHEVKAQFFDDLQAHLTKISRKRRDFIFCGNWAVAPKNEDVSNPDQQKNQSGFLPEEK 176

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           Q   +L  +G+ DA R  +     YS+W   +    K    R D  ++S    + +  A 
Sbjct: 177 QWMSQLAPIGYVDAFRQGNTDKDEYSWWP--SGEQGKGDAWRTDLQIVSASLKNQVEYAV 234

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           I  K     + S H  VIV  D
Sbjct: 235 IYKK----QQFSSHLAVIVDYD 252


>gi|288802560|ref|ZP_06407999.1| exodeoxyribonuclease III [Prevotella melaninogenica D18]
 gi|288335088|gb|EFC73524.1| exodeoxyribonuclease III [Prevotella melaninogenica D18]
          Length = 253

 Score =  121 bits (303), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 49/266 (18%), Positives = 96/266 (36%), Gaps = 19/266 (7%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKT--EDKNFPFETLQSLNYHIETCG 61
           + + +WN   IR  + NL   ++   PDI+CLQETK   +  NF F+  Q   Y  E+  
Sbjct: 1   MRIISWNTFGIRTALPNLQKMLESCTPDIVCLQETKVRTQYANFDFKGYQQ--YWNESTD 58

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
                   +L     I +         D     +     I    + +             
Sbjct: 59  FAHLGTALLLKSSTLISVTYDNFDVYYDKGNVIVTELKEIYVVCVYVPYAGATATTRDNR 118

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND--ACFTLEV 179
                      +  +    +L+  +P +  GD+N++ Q  D ++  +           E 
Sbjct: 119 HH-------WYKCFQSIIHQLQQNKPCVICGDFNVVQQDIDAWDKAVINTSLACFSKEER 171

Query: 180 RQSFQKLQNMGFTDAIRATHDTHH--LYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
            +  + +Q     D  R  + +     ++++ + +D     KG RID  ++S +  S + 
Sbjct: 172 AEIGRFVQEEQLIDVYRYLYPSTKSEGFTYFPFGSDYRKNKKGYRIDLFLISKQLISKVV 231

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263
                    G    S + P+++ +DI
Sbjct: 232 DCYPLQDVEG----SCNVPLLLDIDI 253


>gi|218460834|ref|ZP_03500925.1| exodeoxyribonuclease III protein [Rhizobium etli Kim 5]
          Length = 164

 Score =  121 bits (303), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 74/158 (46%), Positives = 103/158 (65%)

Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167
           IG LYLP+GNP  S K+D K+ W +R   +A++ LE+E P I AGD+N++P   D Y P 
Sbjct: 3   IGCLYLPNGNPFPSAKFDYKLRWFRRLHAYAAELLEIEVPSILAGDFNVMPTEIDVYKPE 62

Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227
            W NDA F  EVR+++ +L   G+TDA+R  H    +Y+FW Y+ +S+ ++ G+RIDH +
Sbjct: 63  RWLNDALFRPEVRKAYAQLVAQGWTDAVRHLHPDERIYTFWKYWRNSFERDAGLRIDHFL 122

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           LSP     L SA +  KPRGW   SDH PV++ LD PE
Sbjct: 123 LSPTVAPWLRSASVRRKPRGWEHTSDHAPVMIELDTPE 160


>gi|307243437|ref|ZP_07525593.1| exodeoxyribonuclease III [Peptostreptococcus stomatis DSM 17678]
 gi|306493161|gb|EFM65158.1| exodeoxyribonuclease III [Peptostreptococcus stomatis DSM 17678]
          Length = 275

 Score =  121 bits (303), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 55/282 (19%), Positives = 104/282 (36%), Gaps = 29/282 (10%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPF------ 47
           + + +WN++S+ A +           ++   +   + DII LQETK   K          
Sbjct: 1   MKLISWNIDSLNAALTSDSARALLSRDVLKNLAGMDADIIALQETKLSAKGPTKKHIECL 60

Query: 48  -ETLQSLN--YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
            E     +  +       +      +    + +++    P               T+   
Sbjct: 61  EEIFSDYDHVWRSSVEPARKGYAGTMFLYKKGMDVKATYPEIGAPCTMDSEGRIITLELD 120

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
           +  +  +Y P+         D +     +      + L   +P++  GDYN+  +  D  
Sbjct: 121 SCYVTQVYTPNAGDGLKRLDDRQ--AWDKKYADYLEGLAKHKPVLACGDYNVAHKEIDLA 178

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIR 222
           NP        FT E R+ F  L   GF D  R  H D   +YS+W      S   N G R
Sbjct: 179 NPASNHRSPGFTDEEREGFTNLLARGFVDTFRQVHGDVEEVYSWWAQRVKTSKVNNTGWR 238

Query: 223 IDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           ID+ ++S +    +  +  +D+  R      DH P+++ +++
Sbjct: 239 IDYWIVSQDVADKVRVSEMVDSGERQ-----DHAPILLEVEL 275


>gi|325180868|emb|CCA15278.1| DNA(apurinic or apyrimidinic site) lyase putative [Albugo laibachii
           Nc14]
          Length = 475

 Score =  120 bits (301), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 49/305 (16%), Positives = 90/305 (29%), Gaps = 42/305 (13%)

Query: 1   MSVVTVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56
           M    + +WNVN +RA +      L  ++      IIC QETK        E     ++ 
Sbjct: 1   MPKAKIVSWNVNGLRAILQRDKVKLNDFLHALQASIICFQETKLTRSELDEELACPKDFD 60

Query: 57  IETCGQKSYNGV----------------------AILSKYQPIEIVTHLPGDDLDVQARF 94
                 +  NG                           K     +          + +  
Sbjct: 61  AFYSHCRVRNGYSGVVTFVRSDLPTIAAEEGLTGMWTRKDTIGHVNMGDAEIPSQMLSEL 120

Query: 95  IEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDY 154
                ++ T       + +         + + KI++ +   R      +  + ++  GD 
Sbjct: 121 ESEGRSVITDHGAFILINVYCPAIRNEERLEYKIAFHELLTRRIQTLRKASKRVVLVGDL 180

Query: 155 NIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG---FTDAIRATHDTHHLYSFWDYY 211
           N+  +  D   P   E         R+   +L +          +   D    ++ W+  
Sbjct: 181 NVASKRIDHCEPKASEFGEFEAHPCRKWLHRLISSPAPLRDIYRKLYPDKKKAFTCWNTA 240

Query: 212 ADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP-------------SDHTPVI 258
             +   N G RID+I++  +    + S R         K              SDH PV 
Sbjct: 241 TMARKNNYGTRIDYILVDEKLQDSVLSCRSFAFKSILEKWLTLAIRLDPERLGSDHCPVF 300

Query: 259 VSLDI 263
             +DI
Sbjct: 301 AEIDI 305


>gi|218202527|gb|EEC84954.1| hypothetical protein OsI_32178 [Oryza sativa Indica Group]
          Length = 619

 Score =  120 bits (300), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 65/355 (18%), Positives = 103/355 (29%), Gaps = 77/355 (21%)

Query: 3   VVTVATWNVNSIRARIHN---LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           +V + T+NVN +R R+     L   +   + DIIC QETK   ++   + + +  Y    
Sbjct: 1   MVKIVTYNVNGLRPRVAQHGSLRRLLDALDADIICFQETKLSRQDLSGDVIMAEGYEAFI 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIE----------------------- 96
              +S  G    S       VT              E                       
Sbjct: 61  SCNRSSKGRGAYSGVATFCRVTSAFSSQEVGLPVAAEEGFTGLQETAKNSETIGDFVLVT 120

Query: 97  ----------------------ATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRF 134
                                      +     + N+Y P        +   K+ + K  
Sbjct: 121 PVEEEGLGEVTKEELLKVDNEGRCVITDHGHFVLFNIYGPAVEEDDIERVRFKLLFYKIL 180

Query: 135 LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDA 194
            R     L L + +   GD NI P   D  +         F   +R   ++     F   
Sbjct: 181 QRRWEHLLALGKRVFVVGDLNIAPSSIDRCDAQPGFEKQTFRKWLRSMLREHGGPFFDAF 240

Query: 195 IRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS-------------LLHSARI 241
                +    Y+ ++    +   N G RIDHI++S                   +    I
Sbjct: 241 RSKHPERVGAYTCFNQKVGAEVYNYGSRIDHILISGACFHHCGSVDDHSIFPCHVEECEI 300

Query: 242 -DTKPRGWTK--------------PSDHTPVIVSL-DIPEPRKKQQDSTSQNMKP 280
            D   RG +K               SDH PV + L +IPE       S++    P
Sbjct: 301 MDHFRRGNSKNMSMWKGGRSSKLEGSDHIPVYIVLNEIPELPVHNTPSSAARYLP 355


>gi|300932899|ref|ZP_07148155.1| putative exodeoxyribonuclease [Corynebacterium resistens DSM 45100]
          Length = 344

 Score =  120 bits (300), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 64/342 (18%), Positives = 107/342 (31%), Gaps = 83/342 (24%)

Query: 3   VVTVATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKNFPFETLQ--SL 53
            +TVAT NVN IRA           +  W+++   D++ +QE +   K            
Sbjct: 2   TLTVATVNVNGIRAAAKQRSETNLGILPWLEQTRADVVLMQEVRANQKQTEAALAPAIEA 61

Query: 54  NYHIE--TCGQKSYNGVAILSKYQPIEIVTHLPG-------------DDLDVQARFIEAT 98
            +H+       K   GV ILS+     +VT                  + D   R+IEA 
Sbjct: 62  GWHLAQAEASAKGRAGVGILSRLPLTHVVTGFGHAEEQAGLTASPGAREFDDSGRYIEAR 121

Query: 99  FTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLE----LEEPLIFAGDY 154
              +   + + +LYLP G   T  + +              +         E +I  GD+
Sbjct: 122 VNASFGPVTVASLYLPSGAADTEKQDEKYRFLDSFGHFMQQRAASTVDGKPENMIIGGDW 181

Query: 155 NIIPQPHDCYNPIIWENDACFTLEVRQSFQK----------------------------- 185
           NI  +  D  N       + F  + R                                  
Sbjct: 182 NICHRRADLKNWRTNRTKSGFLPDERAFMDSILGVWPDSASQVGDETDAGRTGNPAGGVG 241

Query: 186 ----------------------LQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIR 222
                                  +N  + D +R  +      YS+W Y   ++  + G R
Sbjct: 242 DFFGAVDYTPSPLAQQRLREGAPENPQWFDVVRRINPEADGPYSWWTYRGQAFDTDAGWR 301

Query: 223 IDHIMLSPEATSLLH---SARIDTKPRGWTKPSDHTPVIVSL 261
           +D  +++           +A +D       + SDH+PVIV  
Sbjct: 302 LDLHVVTAGMLERAQEADNAWVDRVDSYDLRWSDHSPVIVEY 343


>gi|302346392|ref|YP_003814690.1| putative exodeoxyribonuclease III [Prevotella melaninogenica ATCC
           25845]
 gi|302150873|gb|ADK97134.1| putative exodeoxyribonuclease III [Prevotella melaninogenica ATCC
           25845]
          Length = 253

 Score =  120 bits (300), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 49/266 (18%), Positives = 99/266 (37%), Gaps = 19/266 (7%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTED--KNFPFETLQSLNYHIETCG 61
           + + +WN   IR  + NL   ++   PDI+CLQETK      NF     +    +     
Sbjct: 1   MRIISWNTFGIRTALPNLQQMLESCTPDIVCLQETKVRTLYANFD---FKGYRQYWNEST 57

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
             ++ G A+LSK   +  VT+   +    +   I                         +
Sbjct: 58  DFAHLGTALLSKSSSLIAVTYDNFNVYYDKGNVIVTELKEIYVVCVYVPYAGATATTRDN 117

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND--ACFTLEV 179
             +        +  +    +L+  +P +  GD+N++ Q  D ++  +           E 
Sbjct: 118 RHHWY------KCFQSLIHQLQQNKPCVICGDFNVVQQDIDAWDKAVINTSLACFSKEER 171

Query: 180 RQSFQKLQNMGFTDAIRATHDTHH--LYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
            +  + +Q     D  R  + +     ++++ + +D     KG RID  ++S +  S + 
Sbjct: 172 AEIGRFVQEEQLIDVYRYLYPSTKSEGFTYFPFGSDYRKNKKGYRIDLFLISKQLISKVV 231

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263
                    G    S + P+++ +DI
Sbjct: 232 DCYPLQDVEG----SCNVPLLLDIDI 253


>gi|261218771|ref|ZP_05933052.1| exodeoxyribonuclease III Xth [Brucella ceti M13/05/1]
 gi|260923860|gb|EEX90428.1| exodeoxyribonuclease III Xth [Brucella ceti M13/05/1]
          Length = 158

 Score =  119 bits (299), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 88/158 (55%), Positives = 116/158 (73%)

Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165
           +R+ +LYLP+GNPI + K+  K+SW++R   +A +RL LEEPL+ AGDYN+IP+P D  N
Sbjct: 1   MRVVSLYLPNGNPIDTEKFPYKLSWMQRLENWAKKRLTLEEPLVLAGDYNVIPEPVDARN 60

Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225
           P  W  DA F  + RQ+F++L+N+GFTDAIRA+ D   +YSFWDY A +W KN GIRIDH
Sbjct: 61  PQAWLGDALFQPQSRQAFRRLENLGFTDAIRASTDESGVYSFWDYQAGAWQKNNGIRIDH 120

Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +MLSPEAT+   SA I+   R W KPSDH PV V+L +
Sbjct: 121 LMLSPEATNRFISANIEKHVRAWEKPSDHVPVTVTLAV 158


>gi|115480379|ref|NP_001063783.1| Os09g0536000 [Oryza sativa Japonica Group]
 gi|50726587|dbj|BAD34221.1| AP endonuclease 2-like [Oryza sativa Japonica Group]
 gi|113632016|dbj|BAF25697.1| Os09g0536000 [Oryza sativa Japonica Group]
 gi|215736944|dbj|BAG95873.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 619

 Score =  119 bits (298), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 62/355 (17%), Positives = 100/355 (28%), Gaps = 77/355 (21%)

Query: 3   VVTVATWNVNSIRARIHN---LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           +V + T+NVN +R R+     L   +   + DIIC QETK   ++   + + +  Y    
Sbjct: 1   MVKIVTYNVNGLRPRVAQHGSLRRLLDALDADIICFQETKLSRQDLSGDVIMAEGYEAFI 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIE----------------------- 96
              +S  G    S       VT              E                       
Sbjct: 61  SCNRSSKGRGAYSGVATFCRVTSAFSSQEVALPVAAEEGFTGLQETAKNSETIGDFVLVT 120

Query: 97  ----------------------ATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRF 134
                                      +     + N+Y P        +   K+ + K  
Sbjct: 121 PVEEEGLGEVTKEELLKVDNEGRCVITDHGHFVLFNIYGPAVEEDDIERVRFKLLFYKIL 180

Query: 135 LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDA 194
            R     L L + +   GD NI P   D  +         F   +R   ++     F   
Sbjct: 181 QRRWEHLLALGKRVFVVGDLNIAPSSIDRCDAQPGFEKQTFRKWLRSMLREHGGPFFDAF 240

Query: 195 IRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS-------------LLHSARI 241
                +    Y+ ++    +   N G RIDHI++S                   +    I
Sbjct: 241 RSKHPERVGAYTCFNQKVGAEVYNYGSRIDHILISGACFHHCGSVDDHSIFPCHVEECEI 300

Query: 242 DTKPR---------------GWTKPSDHTPVIVSL-DIPEPRKKQQDSTSQNMKP 280
               R                  + SDH PV + L +IPE       S++    P
Sbjct: 301 MDHFRRGNSENMSMWKGGRSSKLEGSDHIPVYIVLNEIPELPVHNTPSSAARYLP 355


>gi|183179517|ref|ZP_02957728.1| exodeoxyribonuclease III [Vibrio cholerae MZO-3]
 gi|183012928|gb|EDT88228.1| exodeoxyribonuclease III [Vibrio cholerae MZO-3]
          Length = 219

 Score =  119 bits (298), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 59/219 (26%), Positives = 94/219 (42%), Gaps = 9/219 (4%)

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNL 111
           + Y +   GQK++ GVAIL K  P+E++   P  ++   +   +      N Q   I N 
Sbjct: 1   MGYQVYFHGQKAHYGVAILCKQTPVEVIKGFPTDNEEHQKRMIMATFADQNGQKTTILNG 60

Query: 112 YLPHGNPITS-TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCY 164
           Y P G+ +   TK+  K  + +  + +  +     E L+  GD NI P            
Sbjct: 61  YFPQGDNVEHETKFPYKRQFYRDLMTYLREHRSNSERLVVMGDINISPLDLDIGIGEANR 120

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRI 223
              +      F  E R+  Q L + G  D  R  H      +S++DY +  +  N+G+RI
Sbjct: 121 KRWLQTGKCSFQPEEREWLQTLLDWGLVDTFRQLHPDVSDQFSWFDYRSRGFEDNRGLRI 180

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
           D I+ +P        A ID + R   KPSDH P+  +  
Sbjct: 181 DVILATPTLAETCQEAGIDYELRAIDKPSDHAPIWATFK 219


>gi|269957925|ref|YP_003327714.1| exodeoxyribonuclease III Xth [Xylanimonas cellulosilytica DSM
           15894]
 gi|269306606|gb|ACZ32156.1| exodeoxyribonuclease III Xth [Xylanimonas cellulosilytica DSM
           15894]
          Length = 316

 Score =  119 bits (298), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 44/158 (27%), Positives = 75/158 (47%), Gaps = 2/158 (1%)

Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEE--PLIFAGDYNIIPQPHDC 163
           +R+ +LY+P+G  +    Y  K++W++     A+  L  +    +   GD+N+IP   D 
Sbjct: 157 VRVWSLYIPNGRAVGDPHYAYKLAWLEALRTQAAGWLTADPAAQVALVGDWNVIPLDTDV 216

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223
           Y+P  +      T   R +F    + G+ +  R        Y++WDY   ++ KN G+RI
Sbjct: 217 YDPTAFIGSTHVTPAERAAFAAFADAGYREVSREHLPAERTYTYWDYKQLAFPKNNGMRI 276

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           D    +P     + +  ID + R     SDH PVI+ L
Sbjct: 277 DFTWATPALADRVTAVTIDREERKGKGASDHVPVILDL 314



 Score =  103 bits (257), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 28/76 (36%), Positives = 46/76 (60%)

Query: 4  VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
          + +ATWNVNSIRAR+    A+++  + D++ +QETK  D  FP    ++  Y +   G  
Sbjct: 1  MRLATWNVNSIRARVDRAVAFLERWDVDVLAIQETKCRDDQFPHAAFEAAGYEVAHVGFS 60

Query: 64 SYNGVAILSKYQPIEI 79
           +NGVAI+S+    ++
Sbjct: 61 QWNGVAIVSRVGIDDV 76


>gi|159490968|ref|XP_001703445.1| hypothetical protein CHLREDRAFT_143864 [Chlamydomonas reinhardtii]
 gi|158280369|gb|EDP06127.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 437

 Score =  118 bits (296), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 59/293 (20%), Positives = 107/293 (36%), Gaps = 40/293 (13%)

Query: 4   VTVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTE-DKNFPFETLQSL-NYHI 57
           + + +WNV  +RA +      +++ +     +++CLQE K + +     E L  L  +H 
Sbjct: 142 LNILSWNVAGLRALLKKTPDAVSSLVSREAAEVVCLQEHKLQANHQKEVEELLGLQGWHH 201

Query: 58  ETCGQKS---YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG----- 109
                 +   Y+GV++ ++  P+ +V  L            E        T+ +      
Sbjct: 202 AWAFSTAKLGYSGVSVHTRSPPLSVVVGLGHGGPGAADPDPEHEGEGRVVTVELEGLFLV 261

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
           N+Y+P+              W   F  F        +P++  GD N   +  D + P   
Sbjct: 262 NVYVPNSGEGLKRLDYRVGRWDGAFAAFLQGLQARGKPVVVTGDLNCAHKEIDIHAPKTN 321

Query: 170 ENDACFTLEVRQSFQKL--QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227
              A FT E R+SF +L     G  D  R  +     Y+++    +   KNKG R+D+ +
Sbjct: 322 LKSAGFTPEERESFGRLLLAEAGLADTFRRLYPDTVAYTYFTRRFNCREKNKGWRLDYFL 381

Query: 228 LSPEATS--------------------LLHSARIDTKPRGWTKPSDHTPVIVS 260
            S                          ++   I     G    SDH P+ ++
Sbjct: 382 TSESMMPPELQQGGEGAAAAAGPASAWAVYDTWIMQDVYG----SDHLPLGLT 430


>gi|116511599|ref|YP_808815.1| exonuclease III [Lactococcus lactis subsp. cremoris SK11]
 gi|116107253|gb|ABJ72393.1| Exonuclease III [Lactococcus lactis subsp. cremoris SK11]
          Length = 285

 Score =  118 bits (296), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 66/289 (22%), Positives = 108/289 (37%), Gaps = 37/289 (12%)

Query: 5   TVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTE---DKNFPFETLQ 51
              +WN++S+ A +            +   + +  PD++ +QETK      K    E L+
Sbjct: 4   KFISWNIDSLNAALTGTSERAALSLAVVKNLAQAQPDVLAIQETKLPSTGPKKAHLEVLE 63

Query: 52  SL--NYHIETCG-----QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
            L   Y I         +K Y+G  IL K    E V   P  D            T+   
Sbjct: 64  DLFKGYKIVWRSSVEPARKGYSGTMILYKETLPEPVITFPEIDAPEPMDAEGRIITLEFP 123

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
              +  +Y P+     +    D         R     L+ ++P+   GD+N      D  
Sbjct: 124 DFFVTTVYTPNAQEGLTRL--DLRGIWDDNYRNYLTSLDAQKPVFVCGDFNAAYTEIDLA 181

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL--------YSFWDYYAD-SW 215
           NP    N A FT + R+ F +L   GFTD  R  H             Y+++   A  S 
Sbjct: 182 NPRGNHNSAGFTDQEREKFGQLLEAGFTDTFRKLHGPVEKFYEEGRSIYTWFAQRAKTSK 241

Query: 216 SKNKGIRIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
             N G RID+ ++S      +  +  +D+  R      DH P+++  ++
Sbjct: 242 LNNSGWRIDYWLVSNRLADAIKVSEPLDSGERL-----DHVPILLEFEL 285


>gi|116491630|ref|YP_811174.1| exonuclease III [Oenococcus oeni PSU-1]
 gi|116092355|gb|ABJ57509.1| Exonuclease III [Oenococcus oeni PSU-1]
          Length = 273

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 59/280 (21%), Positives = 98/280 (35%), Gaps = 27/280 (9%)

Query: 4   VTVATWNVNSIRARIHNL----------AAWIKENNPDIICLQETKT--------EDKNF 45
           +   +WN++S+ A I +              I    PD   +QETK         +D+  
Sbjct: 1   MNFISWNIDSLNAAIQHKSPRGELTYKTLEKIAAAKPDFFSIQETKLPENGLNKKQDEVL 60

Query: 46  PFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT 105
                  L +   +          +++  +   I    P  D            T+    
Sbjct: 61  EELFPNYLRFVKNSTPPAKKGYAGVMTLAKEAPISYDKPVIDAPGTMDQEGRIVTLEYPD 120

Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165
             + N+Y P+                    R     L   + +IF+GD N+  +  D  N
Sbjct: 121 FYLLNVYTPNSGDGLRRLPARGKWD--DQFRHYISDLSERKIVIFSGDLNVAHEEIDLKN 178

Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD-SWSKNKGIRID 224
                N A FT + R+ F +L + GF D  R  H     YS+W      + + N G RID
Sbjct: 179 SSSNHNSAGFTDQEREKFSRLLSAGFIDTWRLQHPKEIAYSWWSQRNRLAKTNNAGWRID 238

Query: 225 HIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           + ++S  A   +     IDT  R      DH P+ + + +
Sbjct: 239 YYIVSNSAKEKIVKTGMIDTGTRA-----DHAPIYLQMKL 273


>gi|71004198|ref|XP_756765.1| hypothetical protein UM00618.1 [Ustilago maydis 521]
 gi|46095654|gb|EAK80887.1| hypothetical protein UM00618.1 [Ustilago maydis 521]
          Length = 663

 Score =  118 bits (295), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 47/307 (15%), Positives = 89/307 (28%), Gaps = 54/307 (17%)

Query: 4   VTVATWNVNSIRARIHN------LAAW---IKENNPDIICLQETKTEDKNF--PFETLQS 52
           + +  WN+N +R  +        L  W   +     DI C QETK   K    P   L S
Sbjct: 1   MRITVWNINGLRT-LKGYQPWYKLPDWEACLDHLGADIACFQETKMTRKQLTEPMCILPS 59

Query: 53  LNYHIETCGQKSYNGVAILSKY----------------QPIEIVTHLPGDDLDVQARFIE 96
            N        K Y+G     +                     + T+    +  +     +
Sbjct: 60  YNAFFNFHPTKGYSGTVTYVRKSVSIPLKAEQGITGRLSVTNVSTNPLIPNDPIGCIPAD 119

Query: 97  ATFTINTQTL---------------RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQR 141
               ++ Q                       +   N     + + K+++ +     A + 
Sbjct: 120 TRDDVDAQIWNALDEEGRCVLLDLGLFVLFNVYCPNETGPERLEYKMTYYQCLAERAHRL 179

Query: 142 LELEEPLIFAGDYNII-----PQPHDCYNPIIWENDACFTLEVRQSFQK--LQNMGFTDA 194
           ++    ++  GD NII         +        +D                        
Sbjct: 180 IQEGRQVMIVGDMNIIRDPIDHCDAEQSIKEHGWDDFHQHPARSWFQSFLAPHGKFHDVG 239

Query: 195 IRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDH 254
                D   +++ W+   D+   N G+R+D+ + +      +  A I     G    SDH
Sbjct: 240 RMYHADRKKMFTCWNTLIDARPANYGVRLDYTLATEGILPWIKGADIQADVYG----SDH 295

Query: 255 TPVIVSL 261
            P+ + L
Sbjct: 296 CPIYIDL 302


>gi|118586338|ref|ZP_01543790.1| exodeoxyribonuclease A [Oenococcus oeni ATCC BAA-1163]
 gi|290891237|ref|ZP_06554299.1| hypothetical protein AWRIB429_1689 [Oenococcus oeni AWRIB429]
 gi|118433229|gb|EAV39943.1| exodeoxyribonuclease A [Oenococcus oeni ATCC BAA-1163]
 gi|290479201|gb|EFD87863.1| hypothetical protein AWRIB429_1689 [Oenococcus oeni AWRIB429]
          Length = 273

 Score =  117 bits (294), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 59/280 (21%), Positives = 98/280 (35%), Gaps = 27/280 (9%)

Query: 4   VTVATWNVNSIRARIHNL----------AAWIKENNPDIICLQETKT--------EDKNF 45
           +   +WN++S+ A I +              I    PD   +QETK         +D+  
Sbjct: 1   MNFISWNIDSLNAAIQHKSPRGELTYKTLEKIAAAKPDFFSIQETKLPENGLNKKQDEVL 60

Query: 46  PFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT 105
                  L +   +          +++  +   I    P  D            T+    
Sbjct: 61  EELFPNYLRFVKNSTPPAKKGYAGVMTLAKEAPISYDKPVIDAPDTMDQEGRIVTLEYPD 120

Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165
             + N+Y P+                    R     L   + +IF+GD N+  +  D  N
Sbjct: 121 FYLLNVYTPNSGDGLRRLPARGKWD--DQFRHYISDLSERKIVIFSGDLNVAHEEIDLKN 178

Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD-SWSKNKGIRID 224
                N A FT + R+ F +L + GF D  R  H     YS+W      + + N G RID
Sbjct: 179 SSSNHNSAGFTDQEREKFSRLLSAGFIDTWRLQHPKEIAYSWWSQRNRLAKTNNAGWRID 238

Query: 225 HIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           + ++S  A   +     IDT  R      DH P+ + + +
Sbjct: 239 YYIVSNSAKEKIVKTGMIDTGTRA-----DHAPIYLQMKL 273


>gi|15922225|ref|NP_377894.1| exodeoxyribonuclease [Sulfolobus tokodaii str. 7]
 gi|15623014|dbj|BAB67003.1| 241aa long hypothetical exodeoxyribonuclease [Sulfolobus tokodaii
           str. 7]
 gi|199436390|dbj|BAG70946.1| thermostable exonuclease III [Sulfolobus sp. Tu B-1]
          Length = 241

 Score =  117 bits (294), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 56/263 (21%), Positives = 105/263 (39%), Gaps = 25/263 (9%)

Query: 4   VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETL-QSLNYHIETC 60
           + + +WNVN ++A  R   L + +   N D I LQE ++ D   P + L    N      
Sbjct: 1   MKIVSWNVNGLKAITRKGALESVL---NYDAILLQEIRSSD--LPLDLLMSGFNIASFPA 55

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GV  L++ +P  I+  L   + D + R +            I   +   G+ ++
Sbjct: 56  KKKGYSGVMTLTREKPKSIIKGLNVKEFDEEGRTVTVELEKFY---LINAYFPRAGDGLS 112

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
              +                 L   +P+I  GD+N + +  D       E     + + R
Sbjct: 113 RLDFKISFDNKIEEFMDQ---LRRTKPVIICGDFNAVVERRDSSFWDENE--PGLSPKER 167

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           +    +   G+ DA R  + T   YS+  Y     +    +RID+ ++S E    +   +
Sbjct: 168 EWMNHILKKGYIDAYRFINPTKIEYSWRSYRFKWKA----MRIDYCLVSEELKDKIRDCK 223

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263
           I          SDH P+++ +++
Sbjct: 224 ILN-----VSGSDHYPILLEIEV 241


>gi|331241043|ref|XP_003333171.1| hypothetical protein PGTG_14718 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309312161|gb|EFP88752.1| hypothetical protein PGTG_14718 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 358

 Score =  117 bits (294), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 54/265 (20%), Positives = 96/265 (36%), Gaps = 15/265 (5%)

Query: 3   VVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETC 60
            + ++ WNV  I A     L  ++   +PD+I L ETK + +           Y +    
Sbjct: 105 TLRISAWNVCGINACEKKGLKTYLAAEDPDVIILSETKMQAEPDIMHIKHQFRYRYWGGD 164

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
             K Y GVAILSK++PIE+V  LP        +    T   +     IG      G+ + 
Sbjct: 165 ETKGYAGVAILSKHKPIEVVYGLPTATDQSSTKGRIVTLEFSKF-FLIGTYTPNAGDNLK 223

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
              + D+            + L+ ++P+++    N     +        + +        
Sbjct: 224 ---FMDRKKEWNAAFEKYLRELDAKKPVVWGDIRNAA--SNWNKTAGYTQEECDGLNSQL 278

Query: 181 QSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
              Q   +    D  R  +      Y+   Y      K  G RID  ++S      + + 
Sbjct: 279 SPPQDSGHEKLVDVWRELNPDLEGHYT---YRFGCREKGIGWRIDAFIVSQRVFESVKTC 335

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIP 264
            I  +  G    SDH P+++ + + 
Sbjct: 336 EIRQECYG---ASDHVPIVIEIALS 357


>gi|242049990|ref|XP_002462739.1| hypothetical protein SORBIDRAFT_02g031100 [Sorghum bicolor]
 gi|241926116|gb|EER99260.1| hypothetical protein SORBIDRAFT_02g031100 [Sorghum bicolor]
          Length = 618

 Score =  117 bits (294), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 60/355 (16%), Positives = 99/355 (27%), Gaps = 77/355 (21%)

Query: 3   VVTVATWNVNSIRARIHN---LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           +V + T+NVN +R R+     L   +   + DIIC QETK   ++   + + +  Y    
Sbjct: 1   MVKIVTYNVNGLRPRVAQHGSLRRLLDALDADIICFQETKLSRQDLSADVIMAEGYEAFV 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIE----------------------- 96
              +S  G    S       VT              E                       
Sbjct: 61  SCNRSSKGRGAYSGVATFCRVTSSFSSQEVALPVAAEEGFTGLQDYAKNSETVGDFIIAM 120

Query: 97  ----------------------ATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRF 134
                                      +     + N+Y P        +   K+ + K  
Sbjct: 121 PVEEEGLGEITREDLLRVDNEGRCIITDHGHFVLFNIYGPAVEEDDKERVRFKLLFYKIL 180

Query: 135 LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDA 194
            +     L L + +   GD NI P   D  +         F + +R   ++     F   
Sbjct: 181 QKRWEHLLALGKRVFVVGDLNIAPASIDRCDAPPGFEKQMFRVWMRSMLREHGGPFFDAF 240

Query: 195 IRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT---------KP 245
                +    Y+ ++    +   N G RIDHI++S        S              + 
Sbjct: 241 RSKHPERTGAYTCFNQKIGAEEYNYGSRIDHILISGSCLHHCDSVEYHNIFCCHVEECEI 300

Query: 246 RGWTK-------------------PSDHTPVIVSL-DIPEPRKKQQDSTSQNMKP 280
               K                    SDH PV + L +IPE        ++    P
Sbjct: 301 MNHFKRGNSENLSKWKGGRSNKLEGSDHIPVYILLKEIPELPVHNIPPSAARYLP 355


>gi|218515815|ref|ZP_03512655.1| exodeoxyribonuclease III protein [Rhizobium etli 8C-3]
          Length = 142

 Score =  117 bits (294), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 63/117 (53%), Positives = 87/117 (74%), Gaps = 1/117 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+N ++ARI NL  W+K+++PDI+CLQE KT D+ FP   +++L YH+ET GQK
Sbjct: 1   MKIATWNINGVKARIDNLTQWLKDSDPDIVCLQEIKTIDEGFPRLEIEALGYHVETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL-RIGNLYLPHGNPI 119
            +NGVAILSK  P E+   LPGD LD QARF+EA FT+    + R+  +YLP+GNP+
Sbjct: 61  GFNGVAILSKSSPSEVNRGLPGDALDEQARFLEAVFTLPDTRILRVCCIYLPNGNPV 117


>gi|300173607|ref|YP_003772773.1| exodeoxyribonuclease III [Leuconostoc gasicomitatum LMG 18811]
 gi|299887986|emb|CBL91954.1| exodeoxyribonuclease III [Leuconostoc gasicomitatum LMG 18811]
          Length = 272

 Score =  117 bits (294), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 59/279 (21%), Positives = 112/279 (40%), Gaps = 26/279 (9%)

Query: 4   VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPF---ETL 50
           + + +WN++SI A + +          +   I    PD+  +QETK +         E +
Sbjct: 1   MQLISWNIDSINAAVEHKSARGEMTWDVLTTIAARKPDVFAIQETKLKPTGMTKKQSEAI 60

Query: 51  QSL--NYHIETCGQKSYNGVA-ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107
             L  +YH+      + +G +  +   +   +    P               T+      
Sbjct: 61  AELFPDYHVYLDSSTARSGYSGTMMLTRIEPLSIEFPKIAAPDTMDIEGRIITLEFDNYY 120

Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167
           +  +Y P+     +              R   Q L+ ++P+IF+GD N+  +  D  N  
Sbjct: 121 VSTVYTPNSGSALARLSARGEWD--DAYRAYIQTLDAKKPVIFSGDMNVAHEEIDLKNFK 178

Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYAD-SWSKNKGIRIDH 225
              N A FT + R+ F  L + GFTD +R  +     +Y++W   +  S   N G RID+
Sbjct: 179 TNHNSAGFTNQEREKFTALLDAGFTDTLRMQNPNTPEIYTWWAQISKTSKINNSGWRIDY 238

Query: 226 IMLSPEATSLLHSARI-DTKPRGWTKPSDHTPVIVSLDI 263
            ++S      + +  + DT  R      DH P+ +++++
Sbjct: 239 YLVSDRIAENVLNTDVLDTGLRQ-----DHAPISLTINL 272


>gi|15672773|ref|NP_266947.1| exodeoxyribonuclease A [Lactococcus lactis subsp. lactis Il1403]
 gi|12723711|gb|AAK04889.1|AE006312_9 exodeoxyribonuclease A [Lactococcus lactis subsp. lactis Il1403]
 gi|326406342|gb|ADZ63413.1| exodeoxyribonuclease III [Lactococcus lactis subsp. lactis CV56]
          Length = 334

 Score =  117 bits (294), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 66/289 (22%), Positives = 108/289 (37%), Gaps = 37/289 (12%)

Query: 5   TVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTE---DKNFPFETLQ 51
              +WN++S+ A +            +   + +  PD++ +QETK      K    E L+
Sbjct: 53  KFISWNIDSLNAALTGTSERAALSLAVVKNLAQAQPDVLAIQETKLPSTGPKKAHLEVLE 112

Query: 52  SL--NYHIETCG-----QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
            L   Y I         +K Y+G  IL K    E V   P  D            T+   
Sbjct: 113 ELFKGYKIVWRSSVEPARKGYSGTMILYKETLPEPVITFPEIDAPEPMDAEGRIITLEFP 172

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
              +  +Y P+     +    D         R     L+ ++P+   GD+N      D  
Sbjct: 173 DFFVTTVYTPNAQEGLTRL--DLRGIWDDNYRNYLTSLDAQKPVFACGDFNAAYTEIDLA 230

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL--------YSFWDYYAD-SW 215
           NP    N A FT + R+ F +L   GFTD  R  H             Y+++   A  S 
Sbjct: 231 NPRGNHNSAGFTDQEREKFGQLLEAGFTDTFRQLHGQVEKFYEEGRSIYTWFAQRAKTSK 290

Query: 216 SKNKGIRIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
             N G RID+ ++S      +  +  +D+  R      DH P+++  ++
Sbjct: 291 LNNSGWRIDYWLVSNRLAQAVKVSEPLDSGERL-----DHVPILLEFEL 334


>gi|326693809|ref|ZP_08230814.1| exodeoxyribonuclease III [Leuconostoc argentinum KCTC 3773]
          Length = 272

 Score =  117 bits (294), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 63/277 (22%), Positives = 103/277 (37%), Gaps = 30/277 (10%)

Query: 4   VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDKNFPF------ 47
           +   +WN++SI A I +          +   I    PD+  +QETK +            
Sbjct: 1   MHFISWNIDSINAAIEHKSARGEMTWDVLQKIAAQQPDVFAIQETKLKATGLTKKQATVL 60

Query: 48  -ETLQSLN-YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT 105
            E       Y   +  +  Y+G  IL++  P+ +     G   ++       T       
Sbjct: 61  AELFPDYQIYVNASDARSGYSGTMILTRLTPLAVTYPTIGAPGEMDLEGRIITLEFEDFF 120

Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165
           +                             R     L+ ++P+IF+GD N+  Q  D  N
Sbjct: 121 VSTVYTPNSGSALARLA----DRGAWDDAYRAYISSLDAQKPVIFSGDMNVAHQEIDLKN 176

Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYAD-SWSKNKGIRI 223
           P      A FT + R+ F  L + GFTD +RA +     +Y++W   +  S   N G RI
Sbjct: 177 PKTNHKSAGFTDQEREKFTALLSTGFTDTMRAQNPDTPGIYTWWAQISKTSKINNSGWRI 236

Query: 224 DHIMLSPEATSLLHS-ARIDTKPRGWTKPSDHTPVIV 259
           D+ ++S      +   A IDT  R      DH P+ +
Sbjct: 237 DYYLVSDRIADKVTETAVIDTGLRQ-----DHAPISL 268


>gi|330982162|gb|EGH80265.1| exonuclease III [Pseudomonas syringae pv. aptata str. DSM 50252]
          Length = 155

 Score =  117 bits (294), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 48/120 (40%), Positives = 70/120 (58%), Gaps = 1/120 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+N +RAR H LAA I ++ PD+I LQETK  D+ FP   +++L YH+   GQK
Sbjct: 1   MKIVSFNINGLRARPHQLAALIDKHQPDVIGLQETKVSDEQFPQAEVEALGYHVHFHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-TINTQTLRIGNLYLPHGNPITST 122
            + GVA+LS+  P+ +     GDD + Q RFI  T+   N Q + I N Y P G      
Sbjct: 61  GHYGVALLSRNAPLALHKGFEGDDEESQKRFIWGTYADSNGQPVTIMNGYFPQGESRDHP 120


>gi|125624555|ref|YP_001033038.1| 3'-exo-deoxyribonuclease [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|124493363|emb|CAL98337.1| 3'-exo-deoxyribonuclease [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|300071349|gb|ADJ60749.1| exodeoxyribonuclease A [Lactococcus lactis subsp. cremoris NZ9000]
          Length = 285

 Score =  117 bits (294), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 65/289 (22%), Positives = 108/289 (37%), Gaps = 37/289 (12%)

Query: 5   TVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTE---DKNFPFETLQ 51
              +WN++S+ A +            +   + +  PD++ +QETK      K    E L+
Sbjct: 4   KFISWNIDSLNAALTGTSERAALSLAVVKNLAQAQPDVLAIQETKLPSTGPKKAHLEVLE 63

Query: 52  SL--NYHIETCG-----QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
            L   Y I         +K Y+G  +L K    E V   P  D            T+   
Sbjct: 64  ELFKGYKIVWRSSVEPARKGYSGTMVLYKETLPEPVITFPEIDAPEPMDAEGRIITLEFP 123

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
              +  +Y P+     +    D         R     L+ ++P+   GD+N      D  
Sbjct: 124 DFFVTTVYTPNAQEGLTRL--DLRGIWDDNYRNYLTSLDAQKPVFACGDFNAAYTEIDLA 181

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL--------YSFWDYYAD-SW 215
           NP    N A FT + R+ F +L   GFTD  R  H             Y+++   A  S 
Sbjct: 182 NPRGNHNSAGFTDQEREKFGQLLEAGFTDTFRQLHGQVEKFYEEGRSIYTWFAQRAKTSK 241

Query: 216 SKNKGIRIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
             N G RID+ ++S      +  +  +D+  R      DH P+++  ++
Sbjct: 242 LNNSGWRIDYWLVSNRLAQAVKVSEPLDSGERL-----DHVPILLEFEL 285


>gi|281491287|ref|YP_003353267.1| exodeoxyribonuclease III [Lactococcus lactis subsp. lactis KF147]
 gi|281375028|gb|ADA64546.1| Exodeoxyribonuclease III [Lactococcus lactis subsp. lactis KF147]
          Length = 334

 Score =  117 bits (293), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 66/289 (22%), Positives = 108/289 (37%), Gaps = 37/289 (12%)

Query: 5   TVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTE---DKNFPFETLQ 51
              +WN++S+ A +            +   + +  PD++ +QETK      K    E L+
Sbjct: 53  KFISWNIDSLNAALTGTSERAALSLAVVKNLAQAQPDVLAIQETKLPSTGPKKAHLEVLE 112

Query: 52  SL--NYHIETCG-----QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
            L   Y I         +K Y+G  IL K    E V   P  D            T+   
Sbjct: 113 ELFKGYKIVWRSSVEPARKGYSGTMILYKETLPEPVITFPEIDAPEPMDAEGRIITLEFP 172

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
              +  +Y P+     +    D         R     L+ ++P+   GD+N      D  
Sbjct: 173 DFFVTTVYTPNAQEGLTRL--DLRGIWDDNYRNYLTSLDAQKPVFACGDFNAAYTEIDLA 230

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL--------YSFWDYYAD-SW 215
           NP    N A FT + R+ F +L   GFTD  R  H             Y+++   A  S 
Sbjct: 231 NPRANHNSAGFTDQEREKFGQLLEAGFTDTFRKLHGQVEKFYEEGRSIYTWFAQRAKTSK 290

Query: 216 SKNKGIRIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
             N G RID+ ++S      +  +  +D+  R      DH P+++  ++
Sbjct: 291 LNNSGWRIDYWLVSNRLAQAVKVSEPLDSGERL-----DHVPILLEFEL 334


>gi|254283611|ref|ZP_04958579.1| putative exodeoxyribonuclease [gamma proteobacterium NOR51-B]
 gi|219679814|gb|EED36163.1| putative exodeoxyribonuclease [gamma proteobacterium NOR51-B]
          Length = 253

 Score =  116 bits (291), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 53/264 (20%), Positives = 107/264 (40%), Gaps = 17/264 (6%)

Query: 4   VTVATWNVNSI-RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC-- 60
           + + +  V+ +  AR   + +W+K+ + D+ICLQ+T+  + +   +      Y+      
Sbjct: 1   MRIISLAVDGLETARDAGVFSWLKQQDADVICLQDTRCSEYSLKGDEFFPEGYNAYFWDD 60

Query: 61  -GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
                 NGVAI  K  P  I+T L   + D +  +I+A +   +    +           
Sbjct: 61  IDDHRRNGVAIYCKAMPKAIMTGLGFPEFDARGLYIQADYQNISIGSLLMPAAAN----- 115

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                 ++ +++++      +        IF G + +  +P D        +   F+ + 
Sbjct: 116 DPQGLAERAAFMEQLAAHLQKIRNKRRDFIFCGGWGVAHEPIDAEEAGNRIDIPGFSDKD 175

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R+    L   G+ DA RA +     +++W    D+     G+R D  ++S +  + +  A
Sbjct: 176 RRWLNSLYQSGYADAFRAHNSDPDEFTWWPEGDDA----GGVRTDTQIISSDLVAHVDYA 231

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
            I T        S H PVI+  D+
Sbjct: 232 AIYTA----DTFSSHAPVIIDYDV 251


>gi|298706356|emb|CBJ29365.1| potential endonuclease [Ectocarpus siliculosus]
          Length = 696

 Score =  116 bits (290), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 44/303 (14%), Positives = 77/303 (25%), Gaps = 47/303 (15%)

Query: 5   TVATWNVNSIR--ARIHN-LAAWIKENNPDIICLQETKTEDKNF-PFETLQSLNYHIETC 60
            + TWN+N +R  A  H  +   + + N DI+C QE K         E  ++  YH    
Sbjct: 25  RILTWNINGLRKVAASHGGVQQLLDQFNADIVCFQEIKITRAGLVEHELARAQGYHGFFN 84

Query: 61  GQKSYNGVAILSKYQPIEIVTH-------------------------------------L 83
             K    V+       +   +                                       
Sbjct: 85  HCKLPRKVSYSGVATFVRSESGLKTLASTTSLGDSAFFGSPGSFVGERRLSPDRLAALDS 144

Query: 84  PGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLE 143
            G  L                     +          + K D   +   R     S+   
Sbjct: 145 EGRVLVTDHGHFVLFNVYAPCVSSSSDDEKEKTEDRRAFKRDFLATLEARIFEIRSRGRG 204

Query: 144 LEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHH 203
           +          + +       +   + ++    +         +     D  R  H    
Sbjct: 205 VVLVGDLNACASQLDHGFTMTDSEFYASNWSKWIRGMLGLGSPEPPRLVDCFRHLHPDRK 264

Query: 204 -LYSFWDYYADSWSKNKGIRIDHIMLSPEATSL-LHSARIDTKPRGWTKPSDHTPVIVSL 261
             ++ W+    +   N G RID+I+   +     L +  I     G    SDH PV    
Sbjct: 265 SAFTCWNTQTGARDNNYGTRIDYIIAGTDFADRALRACDIMPDFLG----SDHCPVRARF 320

Query: 262 DIP 264
             P
Sbjct: 321 AFP 323


>gi|483519|emb|CAA55675.1| orf 208 [Coxiella burnetii]
          Length = 209

 Score =  116 bits (289), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 47/214 (21%), Positives = 82/214 (38%), Gaps = 9/214 (4%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + T N+N IRA        W+K    DI+CLQETK   +    +      YH      
Sbjct: 1   MRIITLNLNGIRAAARRGFFDWLKRQKADIVCLQETKACLEITNGDQFHPKGYHCYYHDA 60

Query: 63  KS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           +   Y+GV I  + +P  + T L  +  D + R+I+A F   +                 
Sbjct: 61  EKSGYSGVGIYCREKPDRVTTRLGWEHADKEGRYIQADFGSLS-----VASLYMPSGTTG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   K  ++ R+++     +  +   I  GD+NI+ +  D  N    +  +    E R
Sbjct: 116 EHRQKIKFDFMDRYMKRLKNIVHSKRSFIICGDWNIVHKEIDIKNFKSNQKYSGCLPEER 175

Query: 181 QS-FQKLQNMGFTDAIRATHDTHHLYSFWDYYAD 213
               +    +G  DA R  +     Y++W     
Sbjct: 176 AWLDEVFTKVGLVDAFRVVNQKPDQYTWWSSRGR 209


>gi|270010058|gb|EFA06506.1| hypothetical protein TcasGA2_TC009405 [Tribolium castaneum]
          Length = 983

 Score =  116 bits (289), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 52/220 (23%), Positives = 87/220 (39%), Gaps = 10/220 (4%)

Query: 6   VATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64
           + TWNV+ +R+ +       +K + PDI+C+QETK      P E      Y    C    
Sbjct: 770 ITTWNVDGLRSWLKKGCLDILKYDKPDILCIQETKCAVYKLPEEVKTIEGYETLWCCSDK 829

Query: 65  --YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
             Y GV I+ K +P+ ++  +   + D + R I   +        +       G  + + 
Sbjct: 830 DGYAGVGIMVKDKPLNVIYGIDSKEHDTEGRCITVEYET---FFVVNVYVPHAGRNLVTL 886

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
               K            + L+ ++P+I  GD N+  +  D  NP    N A F++E R  
Sbjct: 887 P---KRLDWNEQFEKFIKNLDSQKPVIICGDMNVAHKEIDLANPKTNTNSAGFSVEERDG 943

Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGI 221
                  G+ D  R  +      Y+FW Y  ++   N G 
Sbjct: 944 MTAFLGNGYVDIYRHLYPEKEKAYTFWIYMRNARPNNVGW 983


>gi|2393783|gb|AAD11456.1| AP-endonuclease [Trypanosoma cruzi]
          Length = 405

 Score =  115 bits (288), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 52/299 (17%), Positives = 91/299 (30%), Gaps = 48/299 (16%)

Query: 3   VVTVATWNVNSIR--ARIH--NLAAWIKENNPDIICLQETKTEDKNFPFETLQS-LNYHI 57
           ++   TWNV  +R   R     +   ++E  PD +CLQETK    +   E L     Y  
Sbjct: 105 MLKFITWNVAGLRGLLRKDDQAIQRLLEEEGPDALCLQETKLNPDDPQNEKLGEVPGYRF 164

Query: 58  ETCGQKSYNGVAILSKYQP------IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
                ++  G +    Y         + VT    D L        +      + L     
Sbjct: 165 VDHVCRAKKGYSGTRTYIKNTAAAEWKTVTVKGFDTLKSPQDVGHSEGDEEGRVLTTYFG 224

Query: 112 YLPHGNP---------------ITSTKYDDKISWIKRFLRFASQRLELEEPLI------- 149
               G+                ++  +   +       +R     L              
Sbjct: 225 TQGKGSETFALALVNTYIPNSGMSLERLPYRCQKFDLRIRQHLCTLGRSCNHDKEEGDAP 284

Query: 150 ------FAGDYNIIPQPHDCYN---PIIWENDACFTLEVRQSFQK--LQNMGFTDAIRAT 198
                 +AGD N+  + +D Y        +  + FT E R SF++               
Sbjct: 285 SLAGFIWAGDLNVAERDYDRYFAGSYKAMQKCSGFTPEERASFRETLRVANAVDTFRALY 344

Query: 199 HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257
                +Y+FW    +  ++  G R+D+ ++S      +          G    SDH P+
Sbjct: 345 PKAAPVYTFWSARINGRARGLGWRLDYFVVSAALARHVVDCFTMPHVMG----SDHCPL 399


>gi|71655513|ref|XP_816327.1| apurinic/apyrimidinic endonuclease [Trypanosoma cruzi strain CL
           Brener]
 gi|70881447|gb|EAN94476.1| apurinic/apyrimidinic endonuclease, putative [Trypanosoma cruzi]
          Length = 522

 Score =  115 bits (288), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 52/299 (17%), Positives = 91/299 (30%), Gaps = 48/299 (16%)

Query: 3   VVTVATWNVNSIR--ARIH--NLAAWIKENNPDIICLQETKTEDKNFPFETLQS-LNYHI 57
           ++   TWNV  +R   R     +   ++E  PD +CLQETK    +   E L     Y  
Sbjct: 222 MLKFITWNVAGLRGLLRKDDQAIQRLLEEEGPDALCLQETKLNPDDPQNEKLGEVPGYRF 281

Query: 58  ETCGQKSYNGVAILSKYQP------IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
                ++  G +    Y         + VT    D L        +      + L     
Sbjct: 282 VDHVCRAKKGYSGTRTYIKNTAAAEWKTVTVKGFDTLKSPQDVGHSEGDEEGRVLTTYFG 341

Query: 112 YLPHGNP---------------ITSTKYDDKISWIKRFLRFASQRLELEEPLI------- 149
               G+                ++  +   +       +R     L              
Sbjct: 342 TQGKGSETFALALVNTYIPNSGMSLERLPYRCQKFDLRIRQHLCTLGRSCNHDKEEGDAP 401

Query: 150 ------FAGDYNIIPQPHDCYN---PIIWENDACFTLEVRQSFQK--LQNMGFTDAIRAT 198
                 +AGD N+  + +D Y        +  + FT E R SF++               
Sbjct: 402 SLAGFIWAGDLNVAERDYDRYFAGSYKAMQKCSGFTPEERASFRETLRVANAVDTFRALY 461

Query: 199 HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257
                +Y+FW    +  ++  G R+D+ ++S      +          G    SDH P+
Sbjct: 462 PKAAPVYTFWSARINGRARGLGWRLDYFVVSAALARHVVDCFTMPHVMG----SDHCPL 516


>gi|322826414|gb|EFZ31039.1| apurinic/apyrimidinic endonuclease, putative [Trypanosoma cruzi]
          Length = 419

 Score =  115 bits (287), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 51/299 (17%), Positives = 89/299 (29%), Gaps = 48/299 (16%)

Query: 3   VVTVATWNVNSIR--ARIHN--LAAWIKENNPDIICLQETKTEDKNFP-FETLQSLNYHI 57
           ++   TWNV  +R   R     +   ++E  PD +CLQETK    +    +  +   Y  
Sbjct: 119 MLKFITWNVAGLRGLLRKDGQAIQRLLEEERPDALCLQETKLNPDDPQNVKLGEVPGYCF 178

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLP------GDDLDVQARFIEATFTINTQTLRIGNL 111
                ++  G +    Y      T          D L        +      + L     
Sbjct: 179 VDHVCRAKKGYSGTRTYIKNTAATEWKTVTVKGFDTLKSPQDVGHSDGDEEGRVLTTYFG 238

Query: 112 YLPHGNP---------------ITSTKYDDKISWIKRFLRFASQRLELEEPL-------- 148
               GN                ++  +   +       +R     L              
Sbjct: 239 TQGKGNETFALALVNTYIPNSGMSLERLPYRCQKFDLRIRQHLCALGRSYNHGKEEGDAP 298

Query: 149 -----IFAGDYNIIPQPHDCYN---PIIWENDACFTLEVRQSFQK--LQNMGFTDAIRAT 198
                I+AGD N+  + +D Y        +  + FT E R SF++               
Sbjct: 299 SLAGFIWAGDLNVAERDYDRYFAGSYKAMQKCSGFTPEERASFRETLRVANAVDTFRALY 358

Query: 199 HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257
                +Y+FW    +   +  G R+D+ ++S      +          G    SDH P+
Sbjct: 359 PKAAPVYTFWSARINGRDRGLGWRLDYFVVSAALARHVVDCFTMPHVMG----SDHCPL 413


>gi|159042300|ref|YP_001541552.1| exodeoxyribonuclease III Xth [Caldivirga maquilingensis IC-167]
 gi|157921135|gb|ABW02562.1| exodeoxyribonuclease III Xth [Caldivirga maquilingensis IC-167]
          Length = 237

 Score =  114 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 63/259 (24%), Positives = 106/259 (40%), Gaps = 25/259 (9%)

Query: 7   ATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE--TCGQK 63
            +WNVN IR+             + DII LQE ++ D   P + L S+ +++      +K
Sbjct: 1   MSWNVNGIRSISRKGALRVFN--DFDIILLQEIRSSD--LPLDLL-SMGFNVYGFPAVRK 55

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            Y+GV  LS+ +PI ++  +   D D + R I            I   +   G+ ++   
Sbjct: 56  GYSGVLTLSRVEPINVIRGIGVKDFDDEGRVISIELP---DFYVINAYFPRAGDDLSRLS 112

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +        R +   +  L + +P+I  GD+N +    D             T   RQ  
Sbjct: 113 F---KLVFNRSIEKFTLELRMRKPVIICGDFNAVYSRRDSSFWDDNH--PGLTPLERQWL 167

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            +    GFTD  R  H     YS+  Y      + K +RID+ ++S E T+ +  A I  
Sbjct: 168 SEFIGKGFTDTFRLIHPNEIKYSWRSYR----DRGKAMRIDYCLVSSELTNRVVDADILD 223

Query: 244 KPRGWTKPSDHTPVIVSLD 262
                   SDH P+++ + 
Sbjct: 224 TE-----GSDHYPILLVIK 237


>gi|168059759|ref|XP_001781868.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162666675|gb|EDQ53323.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 591

 Score =  114 bits (286), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 69/360 (19%), Positives = 109/360 (30%), Gaps = 83/360 (23%)

Query: 4   VTVATWNVNSIRARI---HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           + + T+NV S+RAR+     L +++     DIICLQETK   +    E   +  Y     
Sbjct: 1   MRIVTYNVFSLRARLVPPRTLKSFLDSLESDIICLQETKLTRQELTAEIAVADGYESFFS 60

Query: 61  GQK-------SYNGVAILSK---------------------------------YQPIEIV 80
             +        Y+GVA   +                                      + 
Sbjct: 61  CTRTVSKGRVRYSGVATFCRTPTAVPVAADEGFTGAQSSTHQTNYKNDHARVGCYEEVLN 120

Query: 81  THLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQ 140
                    +Q  +       +  +  + NLY P   P    +Y+ K+ + +        
Sbjct: 121 MENMSRQDLLQLDWEGRCLVTDHGSFVLFNLYGPSVGPDNEERYEFKLRFYRALQNRWEG 180

Query: 141 RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN-MGFTDAIRATH 199
            L+    +I  GD+NI P P D  +     +    ++      Q   N   F D  R  H
Sbjct: 181 LLKNGRRVIAVGDFNISPFPIDSCHSDSNPDFDKSSIRQWFRSQLRANGGPFVDVFREIH 240

Query: 200 D-THHLYSFWDYYADSWSKNKGIRIDHIML------------SPEATSL----------L 236
                 Y+FW+  + S   N G R+D I+             S                +
Sbjct: 241 PIREGAYTFWNQMSGSEEFNYGTRLDLIIAAGGCFHQVRSEESNSLLKAEESHHFGTCEV 300

Query: 237 HSARIDTKP----------RGWTK-----PSDHTPVIVSLDIPEP-RKKQQDSTSQNMKP 280
               I  +           RG  K      SDH PV V L    P  +      +    P
Sbjct: 301 EDCDILLEFKRFKADSVPRRGGEKTQKLDGSDHVPVYVQLRPQPPLEQHDVPPLAARFMP 360


>gi|313122838|ref|YP_004033097.1| exonuclease iii [Lactobacillus delbrueckii subsp. bulgaricus ND02]
 gi|312279401|gb|ADQ60120.1| Exonuclease III [Lactobacillus delbrueckii subsp. bulgaricus ND02]
          Length = 265

 Score =  114 bits (285), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 53/262 (20%), Positives = 102/262 (38%), Gaps = 20/262 (7%)

Query: 15  RARI-HNLAAWIKENNPDIICLQETKTEDKNFPF-------ETLQSLNYHIETCGQKSY- 65
           RA +   +   + + +PD++ LQETK               +     ++   +  + +  
Sbjct: 11  RAEMTRGVLKNLHDLDPDVLALQETKLPASGPSKKHQAALADLFPEYDFVWRSSMEPARK 70

Query: 66  -NGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124
                +    + ++ V   P         F     T+      +  +Y P+         
Sbjct: 71  GYAGTMFLYKKGLDPVVTRPEIGAPEPMDFEGRILTLEFPDFYVTQVYTPNAGNGLVRLG 130

Query: 125 DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ 184
           D +     +  R   + L+ ++P++ +GD+N   Q  D  +P    + A FT E R  F 
Sbjct: 131 DRQ--EWDKCYRAYLEELDKKKPVLASGDFNAAYQEIDLKHPENNHHSAGFTDEERAGFG 188

Query: 185 KLQNMGFTDAIRATH-DTHHLYSFWDYY-ADSWSKNKGIRIDHIMLSPEATSLLHSAR-I 241
           +L   GFTD  R  H     +YS+W      + + N G RID+ ++S      +  +  I
Sbjct: 189 QLLAAGFTDTFRQIHGQVEGVYSWWAQRVRTAKANNSGWRIDYWLVSNRLADQVEKSEMI 248

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
           +T  R      DH P+++ + +
Sbjct: 249 ETGERA-----DHCPILLEIKL 265


>gi|322489986|emb|CBZ25246.1| AP-endonuclease [Leishmania mexicana MHOM/GT/2001/U1103]
          Length = 447

 Score =  114 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 51/316 (16%), Positives = 85/316 (26%), Gaps = 65/316 (20%)

Query: 2   SVVTVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTEDKNFPFETLQS--LNY 55
            +    TWNV  +R  +      L A+++   PDI+CLQETK                 Y
Sbjct: 128 RMYKFITWNVAGLRGLLKKNASALRAFMEAEQPDILCLQETKLNVDEAEANAALGVVDGY 187

Query: 56  HIETCGQKSYNGVAILSKYQP--IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
                      G +    Y      +                          + +     
Sbjct: 188 SFVDHPCAFKRGYSGTRTYMKNSTTVKRLHARCTRGFALPSEPQADAAAGSPVLVEGAGD 247

Query: 114 PHGNPITST-----------------------------KYDDKISWIKRFLRFASQRLEL 144
             G  +T+                              +   +I      +R    RL+ 
Sbjct: 248 EEGRVLTTFLSPDPGSGSSSSRIALVNTYVANSGMGLTRLPYRIQSFDPNMREYLHRLDT 307

Query: 145 E-------------------EPLIFAGDYNIIPQPHDCYNPIIWENDACF----TLEVRQ 181
                                  I+AGD N+  + +D Y    +++          E   
Sbjct: 308 WATENAAVPSAAATGGDSSPHGFIWAGDLNVAERDYDRYYAGTFKSMQECSGFAPEERMS 367

Query: 182 SFQKLQNMGFTDAIRATHDTHHL-YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
             + +Q     D  R  +      YSFW    +   +N G R+D+ ++S    S +    
Sbjct: 368 FRETMQRTNSVDVFRQLYPQAGPVYSFWSQRINGRPRNLGWRLDYFVVSSRLASYVVDCF 427

Query: 241 IDTKPRGWTKPSDHTP 256
                 G    SDH P
Sbjct: 428 PMPTVMG----SDHCP 439


>gi|72393161|ref|XP_847381.1| apurinic/apyrimidinic endonuclease [Trypanosoma brucei TREU927]
 gi|62175708|gb|AAX69838.1| apurinic/apyrimidinic endonuclease, putative [Trypanosoma brucei]
 gi|70803411|gb|AAZ13315.1| apurinic/apyrimidinic endonuclease, putative [Trypanosoma brucei
           brucei strain 927/4 GUTat10.1]
          Length = 396

 Score =  114 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 55/303 (18%), Positives = 96/303 (31%), Gaps = 52/303 (17%)

Query: 3   VVTVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTEDKNFPFETLQSL-NYHI 57
           ++   TWNV  +R  +      +   ++E +PD +CLQETK    +   E L  +  Y  
Sbjct: 92  MLKFITWNVAGLRGLLKKDSEAIKKLLEEEHPDALCLQETKLNVGDKGNEALGVVQGYDF 151

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLP--------------------GDDLDVQARFIEA 97
                 +  G +    Y   E+                         GDD          
Sbjct: 152 VDHPCHAKKGYSGTRTYIKKEVAEKWNAVFVKGFGGPNGVDDDKQENGDDEGRVLTTYFG 211

Query: 98  TFTINTQTLRIGNLYLPHGNP-ITSTKYDDKISWIKRFLRFASQRLELEEPL-------- 148
                  T R+  +     N  +   +   +       +R    +L+             
Sbjct: 212 GDQGCENTFRLALVNTYVPNSGMDLARLPYRHKTFDVKMRNYLCKLDAAAMKVNGTCNNV 271

Query: 149 ---------IFAGDYNIIPQPHDCYN---PIIWENDACFTLEVRQ-SFQKLQNMGFTDAI 195
                    I+AGD N+  + +D Y        +  + FT E R    + L+ +   D  
Sbjct: 272 KDAQPPTGVIWAGDLNVAERDYDRYFAGTFAAMQKCSGFTPEERTSFRETLRAVNAVDTF 331

Query: 196 RATHDTHHL-YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDH 254
           R  +      Y+FW    +  ++  G R+D+ ++S      +          G    SDH
Sbjct: 332 RELYPRAAPVYTFWSARINGRARGLGWRLDYFVVSAALAGRVVDCFTMPMIMG----SDH 387

Query: 255 TPV 257
            PV
Sbjct: 388 CPV 390


>gi|58036733|emb|CAF21852.1| AP endonuclease 1 homologue [Trypanosoma brucei brucei]
 gi|261330625|emb|CBH13610.1| apurinic/apyrimidinic endonuclease, putative [Trypanosoma brucei
           gambiense DAL972]
          Length = 396

 Score =  114 bits (284), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 55/303 (18%), Positives = 96/303 (31%), Gaps = 52/303 (17%)

Query: 3   VVTVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTEDKNFPFETLQSL-NYHI 57
           ++   TWNV  +R  +      +   ++E +PD +CLQETK    +   E L  +  Y  
Sbjct: 92  MLKFITWNVAGLRGLLKKDSEAIKKLLEEEHPDALCLQETKLNVGDKGNEALGVVQGYDF 151

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLP--------------------GDDLDVQARFIEA 97
                 +  G +    Y   E+                         GDD          
Sbjct: 152 VDHPCHAKKGYSGTRTYIKKEVAEKWNAVFVKGFGGPNGVDDDKQENGDDEGRVLTTYFG 211

Query: 98  TFTINTQTLRIGNLYLPHGNP-ITSTKYDDKISWIKRFLRFASQRLELEEPL-------- 148
                  T R+  +     N  +   +   +       +R    +L+             
Sbjct: 212 GDQGCENTFRLALVNTYVPNSGMDLARLPYRHKTFDVKMRNYLCKLDAAAMKANGTCNNV 271

Query: 149 ---------IFAGDYNIIPQPHDCYN---PIIWENDACFTLEVRQ-SFQKLQNMGFTDAI 195
                    I+AGD N+  + +D Y        +  + FT E R    + L+ +   D  
Sbjct: 272 KDAQPPTGVIWAGDLNVAERDYDRYFAGTFAAMQKCSGFTPEERTSFRETLRAVNAVDTF 331

Query: 196 RATHDTHHL-YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDH 254
           R  +      Y+FW    +  ++  G R+D+ ++S      +          G    SDH
Sbjct: 332 RELYPRAAPVYTFWSARINGRARGLGWRLDYFVVSAALAGRVVDCFTMPMIMG----SDH 387

Query: 255 TPV 257
            PV
Sbjct: 388 CPV 390


>gi|71423692|ref|XP_812538.1| apurinic/apyrimidinic endonuclease [Trypanosoma cruzi strain CL
           Brener]
 gi|70877328|gb|EAN90687.1| apurinic/apyrimidinic endonuclease [Trypanosoma cruzi]
          Length = 401

 Score =  113 bits (283), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 51/299 (17%), Positives = 90/299 (30%), Gaps = 48/299 (16%)

Query: 3   VVTVATWNVNSIR--ARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQS-LNYHI 57
           ++   TWNV  +R   R     +   ++E  PD +CLQETK    +     L     Y  
Sbjct: 101 MLKFITWNVAGLRGLLRKDGQAIQRLLEEERPDALCLQETKLNPDDPQNGKLGEVPGYCF 160

Query: 58  ETCGQKSYNGVAILSKYQP------IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
                ++  G +    Y         + VT      L        +      + L     
Sbjct: 161 VDHVCRAKKGYSGTRTYIKNTAAAEWKTVTVKGFGTLKSPQDVGHSDGDEEGRVLTTYFG 220

Query: 112 YLPHGNP---------------ITSTKYDDKISWIKRFLRFASQRLELEEPL-------- 148
               G+                ++  +   +       +R     L              
Sbjct: 221 TQGKGSETFALALVNTYIPNSGMSLERLPYRCQKFDLRIRQHLCALGRSYNHGKEEGDAP 280

Query: 149 -----IFAGDYNIIPQPHDCYN---PIIWENDACFTLEVRQSFQK--LQNMGFTDAIRAT 198
                I+AGD N+  + +D Y        +  + FT E R SF++               
Sbjct: 281 SLAGFIWAGDLNVAERDYDRYFAGSYKAMQKCSGFTPEERASFRETLRVANAVDTFRALY 340

Query: 199 HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257
                +Y+FW    +  ++  G R+D+ ++S      +          G    SDH P+
Sbjct: 341 PKAAPVYTFWSARINGRARGLGWRLDYFVVSAALARHVVDCFTMPHVMG----SDHCPL 395


>gi|154334845|ref|XP_001563669.1| AP-endonuclease [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134060691|emb|CAM37706.1| apurinic/apyrimidinic endonuclease-redox protein [Leishmania
           braziliensis MHOM/BR/75/M2904]
          Length = 444

 Score =  112 bits (281), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 52/314 (16%), Positives = 91/314 (28%), Gaps = 64/314 (20%)

Query: 3   VVTVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTEDKNFPFETLQS--LNYH 56
           +    TWNV  +R  +      L  +I+   PD++CLQETK          +      Y 
Sbjct: 127 MYKFITWNVAGLRGLLKKNASVLREFIEAEKPDVLCLQETKLNTDEADANAVLGVVDGYT 186

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQ------------------------- 91
                     G +    Y                                          
Sbjct: 187 FVDHPCAFKRGYSGTRTYMKNSTFVQQLHARCTRGFILPSTPQADAATGSPVLVEGAGDE 246

Query: 92  -----ARFIEATFTINTQTLRIGNLYLPHGNP-ITSTKYDDKISWIKRFLRFASQRLELE 145
                  F+ +  T ++ +LRI  +     N  +   +   +I      +R    +L++ 
Sbjct: 247 EGRVLTTFLSSDSTSSSPSLRIALVNTYVANSGMGLARLPYRIQSFDPNMREYLHQLDVW 306

Query: 146 ------------------EPLIFAGDYNIIPQPHDCYN----PIIWENDACFTLEVRQSF 183
                                I+AGD N+  + +D Y       + E+      E     
Sbjct: 307 ATPNAAVPSVAAGSGGSPYGFIWAGDLNVAERDYDRYYAGTFKSMQESSGFAPEERMSFR 366

Query: 184 QKLQNMGFTDAIRATHDTHHL-YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           + ++     D  R  +      YSFW    +   +N G R+D+ ++S      +      
Sbjct: 367 ETMRRTSSVDVFRQLYPQAGPVYSFWSQRINGRLRNLGWRLDYFIVSSRLALYVVDCFPM 426

Query: 243 TKPRGWTKPSDHTP 256
               G    SDH P
Sbjct: 427 PTVMG----SDHCP 436


>gi|255075203|ref|XP_002501276.1| predicted protein [Micromonas sp. RCC299]
 gi|226516540|gb|ACO62534.1| predicted protein [Micromonas sp. RCC299]
          Length = 353

 Score =  112 bits (281), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 53/274 (19%), Positives = 89/274 (32%), Gaps = 18/274 (6%)

Query: 7   ATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
            +WNV  +RA +      L       +PD+IC+QE K +D +      +      E    
Sbjct: 82  ISWNVAGLRALLDKNSHTLRRIADVESPDVICVQEHKLQDVHVNDAVRRLGEILPEYRTV 141

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K     A       + +V  +              T   +  T+    +           
Sbjct: 142 KFAVSTAKKGYSGLLSVVEGMGDFRCGYTDEGRVLTLEFDAFTMVFTYVPNSGQKLERLE 201

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF---TLEV 179
               K     R            +P+I  GD N+     D YN               E 
Sbjct: 202 YRLKKWDVDFRAYLAHLDGETRGKPVIVGGDLNVGHLDEDIYNVDAPHTKKQCGLTPEER 261

Query: 180 RQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS---- 234
               + L+++   D  RA H      YS+W   A +  +N+G+R+D+   S    S    
Sbjct: 262 SSWTRTLESVKLVDTFRAFHPNARGWYSYWSGRAGNKPRNRGLRLDYFAASERIMSSGRD 321

Query: 235 ----LLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
                +  + +  K     + SDH PV ++L + 
Sbjct: 322 GGGVRVVDSFVLDKL--VAEASDHAPVGITLALD 353


>gi|242219979|ref|XP_002475762.1| predicted protein [Postia placenta Mad-698-R]
 gi|220725034|gb|EED79041.1| predicted protein [Postia placenta Mad-698-R]
          Length = 415

 Score =  112 bits (280), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 43/284 (15%), Positives = 73/284 (25%), Gaps = 45/284 (15%)

Query: 5   TVATWNVNSIRARIH----------------------NLAAWIKENNPDIICLQETK-TE 41
            +ATWN+  + A                             +++  + D++ L ETK   
Sbjct: 148 RIATWNICGLAAAQKKVRVARAVHVHAGLLTAGVCAQGFKYYVEAEDADVLVLTETKPVP 207

Query: 42  DK---NFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT 98
                +   E L  L  H +    K        S Y  I       G  L       E  
Sbjct: 208 VSVLVDLGEEDLLELPGHPDPGSVKGRILTLEFSNYYLIGTYVVNAGQGLKTLEAKKE-- 265

Query: 99  FTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP 158
                                   + D +   I       +             +     
Sbjct: 266 --------------WNVHFTKYMRELDMRKPVIWTGDLNVAPTELDLANPKTNWNKTPGY 311

Query: 159 QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN 218
              +        N +        S        F D  R  H     Y+++ Y  +   K 
Sbjct: 312 TEVETSAFARILNPSSAAASDAASQDDAAPGKFVDVWRKLHPDDRHYTYFSYRFNCRMKG 371

Query: 219 KGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
            G R+D  ++S      +    I ++  G    SDH PV + ++
Sbjct: 372 IGWRLDMFVVSERIEERVKMCEIRSEIYG---ASDHCPVALEIE 412


>gi|19074386|ref|NP_585892.1| CLASS II (DNA LYASE) APURINIC APYRIMIDIC ENDONUCLEASE
           [Encephalitozoon cuniculi GB-M1]
 gi|19069028|emb|CAD25496.1| CLASS II (DNA LYASE) APURINIC APYRIMIDIC ENDONUCLEASE
           [Encephalitozoon cuniculi GB-M1]
          Length = 338

 Score =  112 bits (279), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 49/305 (16%), Positives = 97/305 (31%), Gaps = 50/305 (16%)

Query: 4   VTVATWNVNSIRA---------RIHNLAAWIKE-NNPDIICLQETKTEDKNFPFETLQSL 53
           + + ++NVN IR+         R+     ++K     DI+C+QET+  +     E     
Sbjct: 18  MRITSFNVNGIRSFSKYVMKSCRL-RFNEYVKNILRADILCVQETRGREGAL-GEFHSLR 75

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG---- 109
           +Y   T   K+ +  + +S     ++      D    +      T     + L +     
Sbjct: 76  DYITFTNTNKTNSSRSGVSTMVSKKLYCRGVLDSPFAEDGRSLLTDHGEFKVLNLYFPFF 135

Query: 110 ------NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP--- 160
                 +     G      ++      I     F +    ++    ++    I  +    
Sbjct: 136 DESSERDKSEVIGFYDAIGEFIRGHDNIIMCGDFNAVYSIIDHYQFYSELLRIQRKDRPG 195

Query: 161 ---------------------HDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH 199
                                ++ Y     E+    T + +     +    + DA RA  
Sbjct: 196 LEEGAKERRRARKSPTRLELPYEFYAEDALESYLLETEQRKWLRSLIDGGEYIDAYRALC 255

Query: 200 DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
                Y+ W+   +   +N G RID+I++     + L    I  +  G    SDH PV  
Sbjct: 256 KRPESYTCWNTMLNLRPRNLGTRIDYILIPARFLNRLKDCDIQPEIHG----SDHCPVYA 311

Query: 260 SLDIP 264
            +D  
Sbjct: 312 EIDFD 316


>gi|226326256|ref|ZP_03801774.1| hypothetical protein PROPEN_00098 [Proteus penneri ATCC 35198]
 gi|225205334|gb|EEG87688.1| hypothetical protein PROPEN_00098 [Proteus penneri ATCC 35198]
          Length = 130

 Score =  112 bits (279), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 46/118 (38%), Positives = 66/118 (55%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +   ++N+N +RAR H L A I+++ PD+I LQETK  D  FP +T+ +L YH+   GQK
Sbjct: 1   MKFVSFNINGLRARPHQLEAIIEKHQPDVIGLQETKVHDDMFPLDTVGALGYHVFYHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
            + GVA+L+K +P+ +    P DD D Q R I A        L + N Y P G     
Sbjct: 61  GHYGVALLTKEKPVAVRKGFPSDDDDAQRRMIMADIETPAGLLTVMNGYFPQGESRDH 118


>gi|322497972|emb|CBZ33047.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 447

 Score =  111 bits (278), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 51/316 (16%), Positives = 89/316 (28%), Gaps = 65/316 (20%)

Query: 2   SVVTVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTE----DKNFPFETLQSL 53
            +    TWNV  +R  +      L A+++   PD++CLQETK      D N     +   
Sbjct: 128 RMYKFITWNVAGLRGLLKKNASALRAFMEAEKPDVLCLQETKLNVDEADANATLGVVDGY 187

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
           ++    C  K               +                          + +     
Sbjct: 188 SFVDHPCAFKRGYSGTRTYMKNSTTVKRLHARCTRGFALPSEPQAGAAAGSPVLVEGAGD 247

Query: 114 PHGNPITST-----------------------------KYDDKISWIKRFLRFASQRLEL 144
             G  +T+                              +   ++      +R   QRL+ 
Sbjct: 248 EEGRVLTTFLSPDPDSASSSSRIALVNTYVANSGMGLTRLPYRVQSFDPSMREYLQRLDT 307

Query: 145 E-------------------EPLIFAGDYNIIPQPHDCYNPIIWENDACF----TLEVRQ 181
                                  I+AGD N+  + +D Y    +++          E   
Sbjct: 308 WATENAGVPSAAAKGGDSSPHGFIWAGDLNVAERDYDRYYAGTFKSMQECSGFAPEERIS 367

Query: 182 SFQKLQNMGFTDAIRATHDTHHL-YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
             + +Q     D  R  +      YSFW    +   +N G R+D+ ++S    S +    
Sbjct: 368 FRETMQRTNSVDVFRQLYPHAGPVYSFWSQRINGRPRNLGWRLDYFVVSSRLASYVVDCF 427

Query: 241 IDTKPRGWTKPSDHTP 256
                 G    SDH P
Sbjct: 428 PMPTVMG----SDHCP 439


>gi|321399241|emb|CBZ08543.1| apurinic/apyrimidinic endonuclease-redox protein [Leishmania
           infantum JPCM5]
          Length = 447

 Score =  111 bits (278), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 51/316 (16%), Positives = 89/316 (28%), Gaps = 65/316 (20%)

Query: 2   SVVTVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTE----DKNFPFETLQSL 53
            +    TWNV  +R  +      L A+++   PD++CLQETK      D N     +   
Sbjct: 128 RMYKFITWNVAGLRGLLKKNASALRAFMEAEKPDVLCLQETKLNVDEADANATLGVVDGY 187

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
           ++    C  K               +                          + +     
Sbjct: 188 SFVDHPCAFKRGYSGTRTYMKNSTTVKRLHARCTRGFALPSEPQAGAAAGSPVLVEGAGD 247

Query: 114 PHGNPITST-----------------------------KYDDKISWIKRFLRFASQRLEL 144
             G  +T+                              +   ++      +R   QRL+ 
Sbjct: 248 EEGRVLTTFLSPDPDSASSSSRIALVNTYVANSGMGLTRLPYRVQSFDPSMREYLQRLDT 307

Query: 145 E-------------------EPLIFAGDYNIIPQPHDCYNPIIWENDACF----TLEVRQ 181
                                  I+AGD N+  + +D Y    +++          E   
Sbjct: 308 WATENAAVPSAAAKGGDSSPHGFIWAGDLNVAERDYDRYYAGTFKSMQECSGFAPEERIS 367

Query: 182 SFQKLQNMGFTDAIRATHDTHHL-YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
             + +Q     D  R  +      YSFW    +   +N G R+D+ ++S    S +    
Sbjct: 368 FRETMQRTNSVDVFRQLYPHAGPVYSFWSQRINGRPRNLGWRLDYFVVSSRLASYVVDCF 427

Query: 241 IDTKPRGWTKPSDHTP 256
                 G    SDH P
Sbjct: 428 PMPTVMG----SDHCP 439


>gi|218506516|ref|ZP_03504394.1| exodeoxyribonuclease III protein [Rhizobium etli Brasil 5]
          Length = 149

 Score =  111 bits (278), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 60/144 (41%), Positives = 91/144 (63%)

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           ++ K+ W +R   +A++ LE+E P I AGD+N++P   D Y P  W +DA F  EVR+++
Sbjct: 4   FEYKLRWFRRLSAYAAELLEIEVPSILAGDFNVMPTEIDVYKPERWLDDALFRPEVRKAY 63

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            +L   G+TDA+R  H    +Y+FW Y+ +S+ ++ G+RIDH++LSP     L SA +  
Sbjct: 64  AQLVAQGWTDAVRHLHPGERIYTFWKYWRNSFERDAGLRIDHLLLSPTVAPWLRSACVRR 123

Query: 244 KPRGWTKPSDHTPVIVSLDIPEPR 267
           KPRGW   SDH PV++ L IP   
Sbjct: 124 KPRGWEHTSDHAPVMIELGIPAAE 147


>gi|158428909|pdb|2J63|A Chain A, Crystal Structure Of Ap Endonuclease Lmap From Leishmania
           Major
 gi|158428910|pdb|2J63|B Chain B, Crystal Structure Of Ap Endonuclease Lmap From Leishmania
           Major
          Length = 467

 Score =  111 bits (278), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 50/316 (15%), Positives = 88/316 (27%), Gaps = 65/316 (20%)

Query: 2   SVVTVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTE----DKNFPFETLQSL 53
            +    TWNV  +R  +      L A+++   PD++CLQETK      D N     +   
Sbjct: 148 RMYKFITWNVAGLRGLLKKNASALRAFMEAEKPDVLCLQETKLNVDEADANATLGVVDGY 207

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
           ++    C  K               +                          + +     
Sbjct: 208 SFVDHPCAFKRGYSGTRTYMKNSTTVKGLHARCTRGFALPSEPQADAAAGSRVLVEGAGD 267

Query: 114 PHGNPITST-----------------------------KYDDKISWIKRFLRFASQRLEL 144
             G  +T+                              +   ++      +R    RL+ 
Sbjct: 268 EEGRVLTTFLSPDPDSASSSSRIALVNTYVANSGMGLTRLPYRVQSFDPSMREYLHRLDT 327

Query: 145 E-------------------EPLIFAGDYNIIPQPHDCYNPIIWENDACF----TLEVRQ 181
                                  I+AGD N+  + +D Y    +++          E   
Sbjct: 328 WATENAAVPSAAAMGSGSSPHGFIWAGDLNVAERDYDRYYAGTFKSMQECSGFAPEERMS 387

Query: 182 SFQKLQNMGFTDAIRATHDTHHL-YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
             + +Q     D  R  +      YSFW    +   +N G R+D+ ++S    S +    
Sbjct: 388 FRETMQRTNSVDIFRQLYPQAGPVYSFWSQRINGRPRNLGWRLDYFVVSSRLASYVVDCF 447

Query: 241 IDTKPRGWTKPSDHTP 256
                 G    SDH P
Sbjct: 448 PMPTVMG----SDHCP 459


>gi|157867185|ref|XP_001682147.1| AP-endonuclease; apurinic/apyrimidinic endonuclease-redox protein
           [Leishmania major]
 gi|2393785|gb|AAD11457.1| AP-Endonuclease [Leishmania major]
 gi|68125599|emb|CAJ03609.1| apurinic/apyrimidinic endonuclease-redox protein [Leishmania major
           strain Friedlin]
          Length = 447

 Score =  111 bits (278), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 50/316 (15%), Positives = 88/316 (27%), Gaps = 65/316 (20%)

Query: 2   SVVTVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTE----DKNFPFETLQSL 53
            +    TWNV  +R  +      L A+++   PD++CLQETK      D N     +   
Sbjct: 128 RMYKFITWNVAGLRGLLKKNASALRAFMEAEKPDVLCLQETKLNVDEADANATLGVVDGY 187

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
           ++    C  K               +                          + +     
Sbjct: 188 SFVDHPCAFKRGYSGTRTYMKNSTTVKGLHARCTRGFALPSEPQADAAAGSRVLVEGAGD 247

Query: 114 PHGNPITST-----------------------------KYDDKISWIKRFLRFASQRLEL 144
             G  +T+                              +   ++      +R    RL+ 
Sbjct: 248 EEGRVLTTFLSPDPDSASSSSRIALVNTYVANSGMGLTRLPYRVQSFDPSMREYLHRLDT 307

Query: 145 E-------------------EPLIFAGDYNIIPQPHDCYNPIIWENDACF----TLEVRQ 181
                                  I+AGD N+  + +D Y    +++          E   
Sbjct: 308 WATENAAVPSAAAMGSGSSPHGFIWAGDLNVAERDYDRYYAGTFKSMQECSGFAPEERMS 367

Query: 182 SFQKLQNMGFTDAIRATHDTHHL-YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
             + +Q     D  R  +      YSFW    +   +N G R+D+ ++S    S +    
Sbjct: 368 FRETMQRTNSVDIFRQLYPQAGPVYSFWSQRINGRPRNLGWRLDYFVVSSRLASYVVDCF 427

Query: 241 IDTKPRGWTKPSDHTP 256
                 G    SDH P
Sbjct: 428 PMPTVMG----SDHCP 439


>gi|70605975|ref|YP_254845.1| exonuclease [Sulfolobus acidocaldarius DSM 639]
 gi|68566623|gb|AAY79552.1| exonuclease [Sulfolobus acidocaldarius DSM 639]
          Length = 241

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 63/261 (24%), Positives = 104/261 (39%), Gaps = 24/261 (9%)

Query: 4   VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFE-TLQSLNYHIETC 60
           + + +WNVN I+A  R   L   I   + D+I LQE +T +   P +  L   N      
Sbjct: 1   MKILSWNVNGIKAILRKGALQPVIN--DYDVIMLQEIRTNE--IPLDIALSGSNLFPFPS 56

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +K Y+GV  +SK +P+ ++  L  ++ D + R +            I   +   G+ + 
Sbjct: 57  KKKGYSGVLTISKIKPLSVIKGLGINEFDEEGRVLTIE---LDDYFIINAYFPRAGDDLN 113

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
              Y  K              L   +P+I  GD N+     D       E +   T E R
Sbjct: 114 RLDYKIKFDLEIEKFMLE---LRKRKPVILCGDLNVARDKIDSTFWD--EKEPGLTSEER 168

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
               K+ +  F D  R  +     YS+  Y      K K +RID+ ++S E    +  ++
Sbjct: 169 GWINKILSTDFVDTYRFINGNKIEYSWRSYL----EKWKAMRIDYCIVSSEIKDRIKDSK 224

Query: 241 IDTKPRGWTKPSDHTPVIVSL 261
           I        + SDH PV + +
Sbjct: 225 IIK-----IEGSDHYPVYLEI 240


>gi|303389730|ref|XP_003073097.1| exodeoxyribonuclease III [Encephalitozoon intestinalis ATCC 50506]
 gi|303302241|gb|ADM11737.1| exodeoxyribonuclease III [Encephalitozoon intestinalis ATCC 50506]
          Length = 331

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 47/302 (15%), Positives = 77/302 (25%), Gaps = 49/302 (16%)

Query: 3   VVTVATWNVNSIRA---------RIHNLAAWIKEN-NPDIICLQETKTEDKNFPFETLQS 52
           ++ + ++NVN IR+         R+     ++KE    DI+C+QET+            S
Sbjct: 13  LMRITSFNVNGIRSFSKYIMKSHRL-RFNDYVKETLKADILCVQETRGNKNAL--NEFHS 69

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHL-----------------PGDDLDVQARFI 95
           L  +I        N           + +                     GD   +   F 
Sbjct: 70  LKDYITFTSTNKRNSGRSGVSTIVSKKLYCRGILPSPFSEEGRSLLTDHGDYKVLNLYFP 129

Query: 96  EATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYN 155
                       +   Y   G  I   +                      E L       
Sbjct: 130 FFDENSGKDKSEVIKFYNEVGRFIRMHENMVICGDFNAVYSIVDHYQFYNELLRIQRMGR 189

Query: 156 IIPQPHDCYNPIIWENDACFTLEV---------------RQSFQKLQNMGFTDAIRATHD 200
                                                  +     + +  + D  R  H 
Sbjct: 190 TGWTKETRRMKKCPSKTELPYEFCSEDALEAYFFEVQQRKWLKNLVDSGEYIDTYRILHT 249

Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
               Y+ W+   +   +N G RID+I++       L    I  K  G    SDH PV   
Sbjct: 250 RPESYTCWNTMLNLRPRNLGTRIDYILIPSGFFYKLKDCDIQPKIYG----SDHCPVYAE 305

Query: 261 LD 262
           +D
Sbjct: 306 MD 307


>gi|218508818|ref|ZP_03506696.1| exodeoxyribonuclease III protein [Rhizobium etli Brasil 5]
          Length = 126

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 43/111 (38%), Positives = 64/111 (57%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWN+N ++ARI NL  W+K+++PDI+CLQE KT D+ FP   +++L YH+ET GQK
Sbjct: 1   MKIATWNINGVKARIDNLTQWLKDSDPDIVCLQEIKTIDEGFPRLEIEALGYHVETHGQK 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
            +NGVAILSK  P E+   L       +     +        + +      
Sbjct: 61  GFNGVAILSKSSPSEVNRGLARAMRWDKQARFPSRRGFTPARIPVSWRVCC 111


>gi|261886262|ref|ZP_06010301.1| exodeoxyribonuclease III [Campylobacter fetus subsp. venerealis
           str. Azul-94]
          Length = 181

 Score =  111 bits (278), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 43/165 (26%), Positives = 72/165 (43%), Gaps = 6/165 (3%)

Query: 100 TINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159
                 + + N+Y P+G      +   K+ +  +FL + +  +   + +IF GD N   +
Sbjct: 22  EHKFDNIHLFNIYFPNGQ-SGDERLAYKMDFYDKFLSYINALVSEGKGVIFCGDVNTAHR 80

Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKN 218
             D  NP      + F    R    ++ + GF D  R  + D  + YS+W Y  ++ +KN
Sbjct: 81  KIDLKNPKANSKTSGFLPIERAWIDRVIDSGFIDTFRFINGDKENAYSWWSYRFNARAKN 140

Query: 219 KGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            G RID+  +S      L  A I     G    SDH PV + +D+
Sbjct: 141 VGWRIDYFFISSNLKDKLKDAFILDSIEG----SDHCPVGIEIDL 181


>gi|19112314|ref|NP_595522.1| AP-endonuclease Apn2 [Schizosaccharomyces pombe 972h-]
 gi|48427993|sp|P87175|APN2_SCHPO RecName: Full=DNA-(apurinic or apyrimidinic site) lyase 2; AltName:
           Full=AP endonuclease 2; AltName:
           Full=Apurinic-apyrimidinic endonuclease 2
 gi|2117306|emb|CAB09119.1| AP-endonuclease Apn2 [Schizosaccharomyces pombe]
 gi|40287246|gb|AAR83752.1| AP-endonuclease-like protein [Schizosaccharomyces pombe]
          Length = 523

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 44/307 (14%), Positives = 88/307 (28%), Gaps = 52/307 (16%)

Query: 4   VTVATWNVNSIRARIHNL--------AAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55
           + + +WNVN I+   +              +E   D+IC+QE K +  +FP +      +
Sbjct: 1   MRILSWNVNGIQNPFNYFPWNKKNSYKEIFQELQADVICVQELKMQKDSFPQQYAVVEGF 60

Query: 56  HIETCGQKSYNGVAILSKYQPIEI-----------------------------------V 80
                  K   G + +  Y   ++                                    
Sbjct: 61  DSYFTFPKIRKGYSGVGFYVKKDVAIPVKAEEGITGILPVRGQKYSYSEAPEHEKIGFFP 120

Query: 81  THLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQ 140
             +     +                + IG     +               ++  +    +
Sbjct: 121 KDIDRKTANWIDSEGRCILLDFQMFILIGVYCPVNSGENRLEYRRAFYKALRERIERLIK 180

Query: 141 RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIR---- 196
               +  L+   +    P        II E+     +E RQ  + L        +     
Sbjct: 181 EGNRKIILVGDVNILCNPIDTADQKDIIRESLIPSIMESRQWIRDLLLPSRLGLLLDIGR 240

Query: 197 -ATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHT 255
                   +++ W+   ++   N G RID+ + +P+    +  A I  +  G    SDH 
Sbjct: 241 IQHPTRKGMFTCWNTRLNTRPTNYGTRIDYTLATPDLLPWVQDADIMAEVMG----SDHC 296

Query: 256 PVIVSLD 262
           PV + L 
Sbjct: 297 PVYLDLK 303


>gi|164654988|ref|XP_001728626.1| hypothetical protein MGL_4225 [Malassezia globosa CBS 7966]
 gi|159102507|gb|EDP41412.1| hypothetical protein MGL_4225 [Malassezia globosa CBS 7966]
          Length = 342

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 55/257 (21%), Positives = 97/257 (37%), Gaps = 13/257 (5%)

Query: 5   TVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQ 62
            +A WN+ S+++     L  ++   + D++   ETK  +            Y +     +
Sbjct: 69  RIAIWNITSLKSSDAKGLMRYVHAEDADVLVFSETKVNETPSHAGLDAMYKYRYWGIGEK 128

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y G+A+LSK +PI +   LPG      +            T+ +    +  G+ + + 
Sbjct: 129 KGYAGIAVLSKQKPIHVEKGLPG--FHDPSSNARLLTVEFPHTVLVATYAVNAGDGLKTL 186

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA--CFTLEVR 180
                 +     L    Q L  ++ +I+ GD N++    D        N A      E  
Sbjct: 187 G---NKNAWNEALEKHLQSLPSDKEVIWCGDLNVVWDDRDLAGASKKWNKAAGYTQAECD 243

Query: 181 QSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
              + L      DA R  H      Y+++ +     S+  G RID  ++   A S + + 
Sbjct: 244 AHRRILATNDMCDAWRECHPDAVGHYTYYGWRGQCRSRGAGWRIDSFIIRKRALSRVKAC 303

Query: 240 RIDTKPRGWTKPSDHTP 256
            I  +  G   PSDH P
Sbjct: 304 EIRHEIYG---PSDHVP 317


>gi|170102771|ref|XP_001882601.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164642498|gb|EDR06754.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 650

 Score =  111 bits (277), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 54/331 (16%), Positives = 102/331 (30%), Gaps = 72/331 (21%)

Query: 4   VTVATWNVNSIRARIHNLAAW--IKENN-------PDIICLQETKTEDKNFPFETLQSLN 54
           + + TWN+N +R  +     W  +K ++        DIIC QE K+     P +     +
Sbjct: 1   MRILTWNINGVRT-LPQYHPWNTLKAHDDILNHLEADIICFQEMKSSRPALPKQVAVPPS 59

Query: 55  YHIETCGQKS---YNGVAILSKYQPIEIVT------------------------------ 81
           Y            Y+GVA  +++  +  +                               
Sbjct: 60  YDSFFSFPIRKSGYSGVATYTRHSAVIPLKAEEGLSGVLQPKPPLTAAERISDSDNYPPN 119

Query: 82  ----HLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF 137
                + GD           T  ++     + N+Y P+    T  +   K+ + +     
Sbjct: 120 AETASIEGDLDYADLDSEGRTVILDLGLFVLINVYCPNDGNGTEERDKYKMDFHRLLEMR 179

Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCYNPI----------------IWENDACFTLEVR- 180
               ++    ++  GD N      D                      W  D+   +    
Sbjct: 180 VVGLIKEGREVMVVGDLNACAAIIDHCEGHLMVAKGLAEGLQGEEGFWGKDSRRWMRGFL 239

Query: 181 --QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
             +              +   +   +Y+ W+    +   N G RID+I+++      + +
Sbjct: 240 VPEDEGMPGGFMIDIVRKLWPERKGMYTCWNTKISARDSNYGTRIDYILITRGLLPWVKA 299

Query: 239 ARIDTKPRGWTKPSDHTPVIVSL--DIPEPR 267
           A I        K SDH PV V L  +I +P 
Sbjct: 300 ADIQP----LIKGSDHCPVYVDLFDEITDPT 326


>gi|288576120|ref|ZP_06394182.1| exodeoxyribonuclease III [Neisseria mucosa ATCC 25996]
 gi|288566274|gb|EFC87834.1| exodeoxyribonuclease III [Neisseria mucosa ATCC 25996]
          Length = 122

 Score =  111 bits (276), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 41/122 (33%), Positives = 66/122 (54%)

Query: 142 LELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT 201
           +   E L+  GD+NI P   DCY+P  W      +   RQ F+ L ++G TD++R  H  
Sbjct: 1   MTRHEKLVLLGDFNIAPADADCYDPEKWHEKIHCSSIERQWFKNLLDLGLTDSLRQIHPE 60

Query: 202 HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
              Y+++DY    + +  G+RIDH ++SP  +++L    +D   R   +PSDH PV+   
Sbjct: 61  GAFYTWFDYRGAMFQRKLGLRIDHQLISPALSAVLKDVYVDLDARAQERPSDHAPVVAEF 120

Query: 262 DI 263
           D+
Sbjct: 121 DL 122


>gi|255018766|ref|ZP_05290892.1| 3'-exo-deoxyribonuclease exoA [Listeria monocytogenes FSL F2-515]
          Length = 136

 Score =  111 bits (276), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 5/138 (3%)

Query: 127 KISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL 186
                +  +    + L+  +P++  GD N+  +  D  NP     +A F+ E R  F   
Sbjct: 3   YRMTFEDAILEYVKNLDKTKPVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKFSAF 62

Query: 187 QNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKP 245
            + GF D+ R  +      YS+W Y  ++ ++N G RID+ ++S      L  A+I    
Sbjct: 63  LDAGFIDSFRYFYPDLTDAYSWWSYRMNARARNTGWRIDYFVVSERLKDKLVDAKIHADV 122

Query: 246 RGWTKPSDHTPVIVSLDI 263
            G    SDH PV + L++
Sbjct: 123 LG----SDHCPVELELNL 136


>gi|289612237|emb|CBI60149.1| unnamed protein product [Sordaria macrospora]
          Length = 223

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 59/234 (25%), Positives = 99/234 (42%), Gaps = 36/234 (15%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIET 59
           M  ++VA+WN+NS+R R+  +  +++E  PD++CLQETK E+++FP + L+ L Y HI  
Sbjct: 23  MDTLSVASWNINSVRFRMDIVEQFLREAQPDVLCLQETKVENRDFPHDPLRRLGYSHIAI 82

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            GQ+ ++GVA++SK     +                          LRI N+Y+P G  +
Sbjct: 83  NGQRMHHGVAVISK-----VPLAEDDRLDWQANGEARHLGVRLANGLRIENVYIPAGGDV 137

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              + + K      FL                               I W   +   +EV
Sbjct: 138 PDREVNPKFGQKLDFLE----------------------------RMIDWSKVSHTPIEV 169

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHL-YSFWDYYADSW-SKNKGIRIDHIMLSPE 231
               +      + D  R         Y++W Y A  W + ++G R+DH+  S +
Sbjct: 170 ETLARLQAANDWIDLGRQFVPAPQRLYTWWSYRAKDWAASDRGRRLDHMWASRD 223


>gi|116193731|ref|XP_001222678.1| hypothetical protein CHGG_06583 [Chaetomium globosum CBS 148.51]
 gi|88182496|gb|EAQ89964.1| hypothetical protein CHGG_06583 [Chaetomium globosum CBS 148.51]
          Length = 646

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 50/323 (15%), Positives = 93/323 (28%), Gaps = 70/323 (21%)

Query: 4   VTVATWNVNSI------RARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55
           + + TWN   I      RAR     L A       DI+ +QETK + K+   + +    +
Sbjct: 3   LRITTWN--GITAVTLPRARTKLTSLQAMFDTLEADIVVMQETKIQRKDLRDDMVLVPGW 60

Query: 56  HIET---CGQKSYNGVAILSKYQPIEIVTHLPGDD--LDVQARFIEATFTINTQTLRIGN 110
            +       +K Y+GVAI ++      +    G    L       +       Q +    
Sbjct: 61  DVFFSLPKYKKGYSGVAIYTRSSKCCPIRAEEGITGTLCPPNSSTKFQHLPVDQQIGGYP 120

Query: 111 LYLPHGNPITSTKYD------------------------------DKISWIKRFLRFASQ 140
                 + +     D                               + ++I         
Sbjct: 121 TPGQLSDYVDEPTLDSEGRCVILEFPAFVLIGVYSPATRDETRDEFRQAYINAIDVRVRN 180

Query: 141 RLELEEPLIFAGDYNIIPQPHDCY---------------------NPIIWENDACFTLEV 179
            + + + +   GD NII    D                          +        +  
Sbjct: 181 LVAMGKQVFLCGDLNIIRSEQDTAGLAERLRKEEMTLDDFFSTPSRCFLNHIVFGGHVAG 240

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
            +   + + + +            +Y+ WD   ++   N G RID+++ S         +
Sbjct: 241 EREEGREEPVLWDLCREFHPTRPGMYTCWDTRKNARPGNFGSRIDYVLCSSGIKDWFIDS 300

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
            I     G    SDH PV  ++D
Sbjct: 301 NIQEGLLG----SDHCPVYATID 319


>gi|161869112|ref|YP_001598278.1| exodeoxyribonuclease [Neisseria meningitidis 053442]
 gi|161594665|gb|ABX72325.1| exodeoxyribonuclease [Neisseria meningitidis 053442]
          Length = 206

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 52/211 (24%), Positives = 97/211 (45%), Gaps = 10/211 (4%)

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           ++ H     ++ Y+GVA+ SK +P  +   +  ++ D + RF+   F      L + +LY
Sbjct: 1   MHGHWHCAEKRGYSGVAVYSKRKPDNVQIGMGIEEFDREGRFVRCDFD----RLSVISLY 56

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
           LP G+     +   K  ++  F             ++  GD+NI  Q  D  N    + +
Sbjct: 57  LPSGSSAEERQQV-KYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLKNWKGNQKN 115

Query: 173 ACFTLEVRQSF-QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
           + F  E R+   + +  +G+TD  R  +     Y++W     +++K+ G RID+ M++PE
Sbjct: 116 SGFLPEEREWIGKVIHKLGWTDMWRTLYPDVPGYTWWSNRGQAYAKDVGWRIDYQMVTPE 175

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
             +   SA +        K SDH P+++  D
Sbjct: 176 LAAKAVSAHVYKD----EKFSDHAPLVMEYD 202


>gi|126643348|ref|YP_001086332.1| catabolite repression control protein [Acinetobacter baumannii ATCC
           17978]
          Length = 229

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 53/234 (22%), Positives = 87/234 (37%), Gaps = 8/234 (3%)

Query: 35  LQETKTEDKNFPFETLQSLNYHIETCGQKS--YNGVAILSKYQPIEIVTHLPGDDLDVQA 92
           +QE++   + +  E  +   +H      +   Y G AI S+   + I   L  +  D Q 
Sbjct: 1   MQESRITHEQWT-EKFRPEGWHTHLFPAERAGYAGTAIYSRLPFVSIKDGLGFELADSQG 59

Query: 93  RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG 152
           RFI A F +                         K  ++  + +   Q  +  + +I  G
Sbjct: 60  RFISAEFDLGLSHPVHIASLYLPSGSSGEEAQARKDLFLGEYAKILKQWRDENKSIIICG 119

Query: 153 DYNIIPQPHDCYNPIIWENDACFTL-EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYY 211
           DYNI+ +  D  N    +  +     E          +G+ D  R       LYS+W   
Sbjct: 120 DYNIVHKRIDIKNWSGNQKSSGCLPHERAWLDHIYDELGYVDTFRVVRTEAELYSWWSNR 179

Query: 212 ADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
             + +KN G RID+   SP+  +   +A +          SDH PVI+   I E
Sbjct: 180 GQARAKNVGWRIDYHACSPDWKARTVNAWVYKD----QWFSDHAPVIIDYKIQE 229


>gi|329896531|ref|ZP_08271589.1| Exodeoxyribonuclease III [gamma proteobacterium IMCC3088]
 gi|328921748|gb|EGG29121.1| Exodeoxyribonuclease III [gamma proteobacterium IMCC3088]
          Length = 255

 Score =  110 bits (275), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 57/264 (21%), Positives = 102/264 (38%), Gaps = 15/264 (5%)

Query: 4   VTVATWNVNS-IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + V +++ +  I A       W+++ + D IC+Q+ +  + +   ++     Y+      
Sbjct: 1   MRVISFSADGLIEAEKQGFYEWVRDQDADFICIQDIRCSEYDLRKDSFFPREYNAYFYDN 60

Query: 63  KSYN---GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            + +   GVAI  K  P  I+T L   D D+   +I+A F      + IG+L  P+  P 
Sbjct: 61  LNDSKKDGVAIYCKELPKAIMTGLGFTDFDMDGHYIQADFG----NVSIGSLIAPYAAPN 116

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
            +     K  + +  +    +        I  G++ I  +  D            F  E 
Sbjct: 117 DAAAQARKNEFYQLLVAHLEKVSHKRREFIICGNWRIAHKAKDVEYTERRSKLPGFLAEE 176

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           RQS  ++  +G+ DA R  +     YSFW           G+R D  ++S      +   
Sbjct: 177 RQSLDEIMELGYVDAFREVNSDSDEYSFWP---GGQVGVDGMRTDFQLVSKGLKYNIDYG 233

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
            I          S H PVI+  D+
Sbjct: 234 VIYKA----KSFSTHAPVIMDYDL 253


>gi|307747194|gb|ADN90464.1| exodeoxyribonuclease III [Campylobacter jejuni subsp. jejuni M1]
          Length = 198

 Score =  109 bits (272), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 44/209 (21%), Positives = 73/209 (34%), Gaps = 13/209 (6%)

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
           +  +  +  Y+GV  L  +           D+             +              
Sbjct: 2   YFNSAKRAGYSGVMSLCNFDSEVKKCEFFDDEEGRVLEHRFKNIALFNIYF--------P 53

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
                  + + K+ +   FL +  + L+    +I  GD N   +  D  +P    N + F
Sbjct: 54  NGQKDEERLNFKMKFYVDFLVYLDKLLKDGFEIIICGDVNTAHKEIDLTHPKANANTSGF 113

Query: 176 TLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
               R     L  +GF D  R  + +    YS+W Y   +  +N G RID+  +S     
Sbjct: 114 LPIERAWIDDLLKLGFIDTFREINGEIKEKYSWWSYRMKARERNVGWRIDYFFISKGLKD 173

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            L +A I     G    SDH PV + +DI
Sbjct: 174 KLKNAFIRDDIFG----SDHAPVGIEIDI 198


>gi|307109978|gb|EFN58215.1| hypothetical protein CHLNCDRAFT_142087 [Chlorella variabilis]
          Length = 483

 Score =  109 bits (271), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 85/254 (33%), Gaps = 15/254 (5%)

Query: 4   VTVATWNVNSI-----RARIHNL--AAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56
           + +  WN+NS+      A + +     + +E+  DI CLQE+K  +     E      Y 
Sbjct: 1   MKLLCWNINSLAPTVRNAVLKHGSWLGFFQEHGLDIACLQESKVPEDKLTKELCCVDGYQ 60

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF------TINTQTLRIGN 110
                 +   G A      P                 +    +      T +   + +  
Sbjct: 61  SFWAHSRQGRGHAPDIPPGPAAAQRCREKKGYSGVTTYASDAYAPLVLITDHGAFVLVNV 120

Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170
                G+     +   K+ ++    R   +       L+  GD+N+  +  D +  ++  
Sbjct: 121 YVPNAGDRPDRPRLHYKLRFLAALRRKCEELAVAGRELLLVGDFNVPAEARDVHPDLLPG 180

Query: 171 NDACF-TLEVRQSFQKLQNMGFTDAIRATHDTHHL-YSFWDYYADSWSKNKGIRIDHIML 228
                   +  ++        + D  R  H      YS W+    + + N+G+RID+++ 
Sbjct: 181 GSLDELYGQEERAALHALTAAYPDVWRRLHPQEAATYSVWNEKTSARAFNRGLRIDYVLC 240

Query: 229 SPEATSLLHSARID 242
           +P     + S  I 
Sbjct: 241 TPGLLGRVVSCEIL 254


>gi|145344271|ref|XP_001416660.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144576886|gb|ABO94953.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 269

 Score =  109 bits (271), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 64/277 (23%), Positives = 108/277 (38%), Gaps = 31/277 (11%)

Query: 9   WNVNSIRA----RIHNLAAWIKENNPDIICLQETKTED---KNFPFETLQSLNYH----- 56
           WNV  +R+     +  L   I    PD++ LQE K ++     F     +    +     
Sbjct: 2   WNVAGLRSFHEKSLDRLRGVIAGEAPDVVILQEHKLQETHCAAFTERLRRDFPMYKTVQF 61

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
             +  +K Y+GVA     + +EI   L       + R    T T+  +   +   Y+P+ 
Sbjct: 62  AVSVAKKGYSGVATYDGPKLLEIREGLGARGYTDEGR----TMTLEFEGFYLVTAYVPNS 117

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND---A 173
                 + D +I   +R +R   + L+ ++P+++ GD N+     D +N           
Sbjct: 118 GQ-DLKRLDYRIGEWERDMRAHLKELDAKKPVVYMGDLNVAHLDSDIWNVGASHIKKSAG 176

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
               E       L+     DA R  H D    +S+W   A +   NKG+R+D+ + S   
Sbjct: 177 TTPQEREAFGVMLEENDLRDAFRHFHGDAVGWFSYWSVRAGNRPFNKGLRLDYTLASKRV 236

Query: 233 TS------LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                    +  A I  K  G    SDH PV V+L +
Sbjct: 237 FDGGADGVEVVDAFILDKVLG----SDHAPVGVTLAL 269


>gi|297156312|gb|ADI06024.1| exonuclease [Streptomyces bingchenggensis BCW-1]
          Length = 340

 Score =  109 bits (271), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 41/130 (31%), Positives = 69/130 (53%), Gaps = 1/130 (0%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +ATWNVNSI AR+  L AW++ +  D++C+QE K+ +  FP+E L+ L Y        
Sbjct: 1   MRIATWNVNSITARLPRLLAWLESSGTDVLCIQEIKSAESAFPYEPLRELGYEAAVNATG 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +NGV ++S+    ++   LPG       +   A        +R+ ++Y+P+G  I    
Sbjct: 61  RWNGVGVISRVGLADVTPGLPGGPDYEGEQEPRAIAATCG-GVRVQSVYVPNGREIGHPH 119

Query: 124 YDDKISWIKR 133
           YD K+ W + 
Sbjct: 120 YDYKLRWFEA 129


>gi|256086538|ref|XP_002579455.1| ap endonuclease [Schistosoma mansoni]
 gi|238664890|emb|CAZ35694.1| ap endonuclease, putative [Schistosoma mansoni]
          Length = 426

 Score =  108 bits (270), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 57/324 (17%), Positives = 97/324 (29%), Gaps = 64/324 (19%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS--LNYHIE 58
           M+ V + +WN+N +R+  H L + +     DIIC+QETKT                Y   
Sbjct: 1   MNRVRICSWNINGLRSIQHPLKSILDSLTSDIICIQETKTTPDISREFAFADNYNGYFSH 60

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDD------------------------------- 87
           +  +  Y+G A+  +       T    +D                               
Sbjct: 61  SIHKTGYSGTAVFCRNPLKPTKTFHSLNDILVESISCQNNSIDGWGFLKRKLNISHTEAR 120

Query: 88  -----------LDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
                            F         + L + ++Y P  NP    + + K  +      
Sbjct: 121 NLDAEGRVLGLQFSTDIFTTFRTPDEIRPLIVLSIYFPRLNPENVERLNYKHLFQSAVQL 180

Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT---- 192
                L +E  ++ AGD+NI  +  D   P     D       +   Q L          
Sbjct: 181 CIE-SLLIENNVVIAGDFNICHKMIDHCAPDELMMDKFSNSFRQWFDQLLIEEQQDVSLD 239

Query: 193 -----------DAIRATHDTHH-LYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH--- 237
                      D  R  H      ++ W    ++   N G+R+D+I+   +   ++    
Sbjct: 240 NQSSVGLRRFVDIFRLLHPHRKNAFTCWSSRTNARQTNYGVRLDYILFDMKLVEIITTIS 299

Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261
              I          SDH P+   L
Sbjct: 300 DNNIQADLMSHINGSDHCPIYADL 323


>gi|319945181|ref|ZP_08019443.1| exodeoxyribonuclease III [Lautropia mirabilis ATCC 51599]
 gi|319741751|gb|EFV94176.1| exodeoxyribonuclease III [Lautropia mirabilis ATCC 51599]
          Length = 162

 Score =  108 bits (270), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 38/153 (24%), Positives = 63/153 (41%), Gaps = 5/153 (3%)

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                  +  +   K  +++ F R   +  +    +I  GD+N+  +  D  N    + +
Sbjct: 12  YVPSGSSSEERLQRKFVFMEAFARHMQELKDSGREIILCGDWNVAHKEIDLKNWRSNQKN 71

Query: 173 ACFTLEVRQSFQKLQNM-GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
           + F  E RQ    L +  GF D  R        Y++W     +W+KN G RID+ + +P 
Sbjct: 72  SGFLPEERQWLSSLLDEIGFVDVFRQLDPRPEQYTWWSNRGQAWAKNVGWRIDYQIATPG 131

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
             +    A I    R     SDH P+I+  D P
Sbjct: 132 IAATATRAEIYKDER----FSDHAPLIIDYDWP 160


>gi|293338471|gb|ADE43488.1| AmpN [Stenotrophomonas maltophilia]
          Length = 220

 Score =  108 bits (269), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 53/229 (23%), Positives = 88/229 (38%), Gaps = 23/229 (10%)

Query: 49  TLQSLNYHIETCG---QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT 105
             +   +H        +K Y+GVAI SK +P +++T L     D + R+IEA +      
Sbjct: 1   MFRPDGHHCFYRDAITKKGYSGVAIYSKREPDQVITSLGWAPFDDEGRYIEARYG----N 56

Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165
           L + + Y+P G+     +   K   ++       +        +  GD+NI+    D  N
Sbjct: 57  LSVVSFYIPSGS-SGDLRQGFKFEVMEWLRPILEEWARSGRDYVLCGDWNIVRSALDIKN 115

Query: 166 PIIWENDACFTLEVRQSFQKLQNMG-----------FTDAIRATHDTHHLYSFWDYYADS 214
               + ++    E R     L               + DA R  + T   Y++W     +
Sbjct: 116 WKSNQKNSGCLPEERDWLNALCADHGQATDVAAGRGWADAYRLLNPTGEDYTWWSNRGAA 175

Query: 215 WSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            + N G RID+  ++P     L S  I    R     SDH P  V  D+
Sbjct: 176 RANNVGWRIDYQFITPGLRDRLRSCSIYRDER----FSDHAPFTVDYDL 220


>gi|326538609|gb|ADZ86824.1| exodeoxyribonuclease III (xth) [Brucella melitensis M5-90]
          Length = 74

 Score =  108 bits (269), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 38/70 (54%), Positives = 56/70 (80%)

Query: 4  VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
          + +ATWN+N ++ARI NL  W++E++PDI+CLQE K+ D+ FP   +++L YH+ET GQK
Sbjct: 1  MKIATWNINGVKARIDNLQHWLRESSPDIVCLQEIKSVDEQFPRLEIEALGYHVETHGQK 60

Query: 64 SYNGVAILSK 73
           +NGVA+LSK
Sbjct: 61 GFNGVALLSK 70


>gi|262165968|ref|ZP_06033705.1| exodeoxyribonuclease III [Vibrio mimicus VM223]
 gi|262025684|gb|EEY44352.1| exodeoxyribonuclease III [Vibrio mimicus VM223]
          Length = 195

 Score =  108 bits (269), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 45/182 (24%), Positives = 72/182 (39%), Gaps = 8/182 (4%)

Query: 89  DVQARFIEATFTINTQTLRIGNLYLPHGNPITS-TKYDDKISWIKRFLRFASQRLELEEP 147
             +   +      +     I N Y P G+ +   TK+  K  + +  + +  +     E 
Sbjct: 14  HQKRMIMATFADEDGNKTTILNGYFPQGDNVEHETKFPYKRQFYRDLMTYLREHRSNTES 73

Query: 148 LIFAGDYNIIPQP------HDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT 201
           L+  GD NI P               +      F  E R+  Q L + G  D  R  H  
Sbjct: 74  LVVMGDINISPLDLDIGIGEANRKRWLQTGKCSFQPEEREWLQTLMDWGLVDTFRQLHPE 133

Query: 202 -HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
               +S++DY +  +  N+G+RID I+ +P        A ID + RG  KPSDH P+  +
Sbjct: 134 VSDQFSWFDYRSRGFDDNRGLRIDVILATPTLAETCQEAGIDYELRGIDKPSDHAPIWAT 193

Query: 261 LD 262
             
Sbjct: 194 FK 195


>gi|296880312|ref|ZP_06904277.1| exodeoxyribonuclease III [Clostridium difficile NAP07]
 gi|296428755|gb|EFH14637.1| exodeoxyribonuclease III [Clostridium difficile NAP07]
          Length = 181

 Score =  107 bits (268), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 42/138 (30%), Positives = 64/138 (46%), Gaps = 5/138 (3%)

Query: 126 DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQK 185
           +  +  +        +L+  +P+I  GD N+  +  D  NP     +A FT E R+ F K
Sbjct: 48  EYRTRWEDDFIDYLTKLDNHKPVIVCGDMNVAHKEIDLKNPKNNMKNAGFTKEEREKFSK 107

Query: 186 LQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK 244
           L + GF D  R  +     +YS+W Y  ++   N G RID+   S +    L SA I T+
Sbjct: 108 LLDSGFIDTYRYFNPDKEGVYSWWSYRFNARKNNAGWRIDYFCASKKLEDRLISADIHTE 167

Query: 245 PRGWTKPSDHTPVIVSLD 262
             G    SDH PV + + 
Sbjct: 168 VLG----SDHCPVELEIK 181


>gi|4678346|emb|CAB41156.1| putative protein [Arabidopsis thaliana]
          Length = 686

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 59/324 (18%), Positives = 105/324 (32%), Gaps = 56/324 (17%)

Query: 5   TVATWNVNSIRARIH----NLAAWIKENNPDIICLQETKT-------------------- 40
              TWN NS   R+       + ++ + +PD+I +QE +                     
Sbjct: 366 KFMTWNANSFLLRVKNDWSQFSKFVSDFDPDVIAIQEVRMPAAGGKGKPKNHEELSDDTK 425

Query: 41  ---EDKNFPFETL--QSLNYH--IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR 93
              E+K      L       +    +     Y G A+L K        +   D L  +  
Sbjct: 426 VLREEKQILTRALSSPPFGNYGVWWSLADSKYAGTALLVKKCFKPRKVYFNLDKLASKHE 485

Query: 94  FIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGD 153
                     +T R+ N Y P+           +                 ++PLI+ GD
Sbjct: 486 PDGRVILAEFETFRLLNTYSPNNGWKDEEN-AFQRRRKWDKRIVEFLNKTSDKPLIWCGD 544

Query: 154 YNIIPQPHDCYNPIIW---------------ENDACFTL-EVRQSFQKLQNMGFTDAIRA 197
            N+  +  D  +P  +                    FT  E  +    ++     DA R 
Sbjct: 545 LNVSHEEIDVSHPEFFATAKLNGYVPPNKEDCGQPGFTPSERGRFGATIKEGRLVDAYRY 604

Query: 198 THDTHHLYSFWDYYADSWSKNKG--IRIDHIMLSPEATSLLHSARIDTKPRGWT----KP 251
            H    + S + +  +   K +G  +RID+ ++S +    + S ++    RG        
Sbjct: 605 LHKEQEMESGFSWSGNPIGKYRGKRMRIDYFLVSEQLKDRIVSCKMH--GRGIELEGFHG 662

Query: 252 SDHTPVIVSLDIPEPRKKQQDSTS 275
           SDH PV + L  P    +Q   ++
Sbjct: 663 SDHCPVTLELSKPSSEMEQNQVSN 686


>gi|308801717|ref|XP_003078172.1| ARP protein (ISS) [Ostreococcus tauri]
          Length = 460

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 66/307 (21%), Positives = 116/307 (37%), Gaps = 49/307 (15%)

Query: 3   VVTVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTEDKNFPF--ETLQSL--N 54
                +WNV  +R+ +      L A ++E  PD+I LQE K +  +       L+ L   
Sbjct: 159 TFKAISWNVAGLRSFVEKSGAKLRALVEEERPDVIILQEHKLQMSHIDAFGSKLKELCPG 218

Query: 55  Y----HIETCGQKSYNGVAILSKYQP----------------------IEIVTHLPGDDL 88
           Y       +  +K Y+G+  +S+                          + V+H  G   
Sbjct: 219 YDTTRFAVSTAKKGYSGIVAVSREGRKGGQVTIEAMLGGASKPAVSDGFKAVSHSEGLQG 278

Query: 89  DVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPL 148
                    T TI  +   + + Y+P+       + D +I   +R ++   + L+ ++P+
Sbjct: 279 GTAYVDEGRTLTIEYEKFYVVSAYVPNSGQ-DLKRLDYRIKEWERDMKAHLKALDAKKPV 337

Query: 149 IFAGDYNIIPQPHDCYNPIIWEND---ACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHL 204
           I+ GD N+     D +N               E       L+  G  D+ R  H D    
Sbjct: 338 IYIGDLNVAHLDADIWNVTASHIKKSAGTTPQERGAFGVMLEENGLHDSFRFFHGDAAGW 397

Query: 205 YSFWDYYADSWSKNKGIRIDHIMLSPEATS------LLHSARIDTKPRGWTKPSDHTPVI 258
           +S+W   A +   NKG+R+D+ + S            +  A I  +  G    SDH PV 
Sbjct: 398 FSYWSVRAGNRPFNKGLRLDYAVASKRLFDGDDSGVEVVDAFILDQVTG----SDHAPVG 453

Query: 259 VSLDIPE 265
           ++L I +
Sbjct: 454 ITLAIKD 460


>gi|116056623|emb|CAL52912.1| ARP protein (ISS) [Ostreococcus tauri]
          Length = 466

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 66/307 (21%), Positives = 116/307 (37%), Gaps = 49/307 (15%)

Query: 3   VVTVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTEDKNFPF--ETLQSL--N 54
                +WNV  +R+ +      L A ++E  PD+I LQE K +  +       L+ L   
Sbjct: 165 TFKAISWNVAGLRSFVEKSGAKLRALVEEERPDVIILQEHKLQMSHIDAFGSKLKELCPG 224

Query: 55  Y----HIETCGQKSYNGVAILSKYQP----------------------IEIVTHLPGDDL 88
           Y       +  +K Y+G+  +S+                          + V+H  G   
Sbjct: 225 YDTTRFAVSTAKKGYSGIVAVSREGRKGGQVTIEAMLGGASKPAVSDGFKAVSHSEGLQG 284

Query: 89  DVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPL 148
                    T TI  +   + + Y+P+       + D +I   +R ++   + L+ ++P+
Sbjct: 285 GTAYVDEGRTLTIEYEKFYVVSAYVPNSGQ-DLKRLDYRIKEWERDMKAHLKALDAKKPV 343

Query: 149 IFAGDYNIIPQPHDCYNPIIWEND---ACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHL 204
           I+ GD N+     D +N               E       L+  G  D+ R  H D    
Sbjct: 344 IYIGDLNVAHLDADIWNVTASHIKKSAGTTPQERGAFGVMLEENGLHDSFRFFHGDAAGW 403

Query: 205 YSFWDYYADSWSKNKGIRIDHIMLSPEATS------LLHSARIDTKPRGWTKPSDHTPVI 258
           +S+W   A +   NKG+R+D+ + S            +  A I  +  G    SDH PV 
Sbjct: 404 FSYWSVRAGNRPFNKGLRLDYAVASKRLFDGDDSGVEVVDAFILDQVTG----SDHAPVG 459

Query: 259 VSLDIPE 265
           ++L I +
Sbjct: 460 ITLAIKD 466


>gi|218291327|ref|ZP_03495287.1| exodeoxyribonuclease III Xth [Alicyclobacillus acidocaldarius LAA1]
 gi|218238773|gb|EED05987.1| exodeoxyribonuclease III Xth [Alicyclobacillus acidocaldarius LAA1]
          Length = 174

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 39/134 (29%), Positives = 61/134 (45%), Gaps = 5/134 (3%)

Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG 190
            +   R     L+ E+P+I  GD N+  +  D  N      ++ FT E R    +L + G
Sbjct: 45  WEDAFRAYLCALDREKPVIACGDLNVAHEEIDIKNAKSNRGNSGFTDEERAKMTELLDAG 104

Query: 191 FTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT 249
           F D  RA +      Y++W        +N G RID+ ++S      +  ARID    G  
Sbjct: 105 FVDTFRALYPNVTDKYTWWSNMPGVRERNIGWRIDYFLVSERLRDRILEARIDDHVLG-- 162

Query: 250 KPSDHTPVIVSLDI 263
             SDH PV++ +D+
Sbjct: 163 --SDHCPVVLEVDL 174


>gi|88607806|ref|YP_505072.1| exodeoxyribonuclease III, N-terminal truncation [Anaplasma
           phagocytophilum HZ]
 gi|88598869|gb|ABD44339.1| exodeoxyribonuclease III, N-terminal truncated [Anaplasma
           phagocytophilum HZ]
          Length = 185

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 46/173 (26%), Positives = 85/173 (49%), Gaps = 1/173 (0%)

Query: 92  ARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFA 151
                       + +R+ ++Y+P+G  + S  +  K+ +++         ++ E+ LI  
Sbjct: 13  RYIECTLECTGNKKIRVVSVYVPNGQEVESETFFYKLKFLEHLKDRLLNIMKTEDFLIAG 72

Query: 152 GDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDY 210
           GD+N+ P+  D ++P   +   CF +  R  F+++ N G  D  R         +S+W+Y
Sbjct: 73  GDFNVAPEEIDVHDPKALDGRLCFHILERAKFREILNNGIVDIFRTFVGIDRKEFSWWNY 132

Query: 211 YADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
               W  N+G+RID ++ SP+    +    I +K RGW  PSDH PV+  +D+
Sbjct: 133 REGGWQNNRGLRIDALLSSPQIADKVLDCSILSKVRGWDTPSDHAPVMGDIDV 185


>gi|254716966|ref|ZP_05178777.1| exodeoxyribonuclease III (xth) [Brucella ceti M13/05/1]
          Length = 71

 Score =  107 bits (267), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 38/70 (54%), Positives = 56/70 (80%)

Query: 4  VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
          + +ATWN+N ++ARI NL  W++E++PDI+CLQE K+ D+ FP   +++L YH+ET GQK
Sbjct: 1  MKIATWNINGVKARIDNLQHWLRESSPDIVCLQEIKSVDEQFPRLEIEALGYHVETHGQK 60

Query: 64 SYNGVAILSK 73
           +NGVA+LSK
Sbjct: 61 GFNGVALLSK 70


>gi|297816036|ref|XP_002875901.1| hypothetical protein ARALYDRAFT_347932 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297321739|gb|EFH52160.1| hypothetical protein ARALYDRAFT_347932 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 684

 Score =  107 bits (266), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 63/324 (19%), Positives = 108/324 (33%), Gaps = 56/324 (17%)

Query: 5   TVATWNVNSIRARIH----NLAAWIKENNPDIICLQETKTE----------------DKN 44
              TWN NS   R+       + ++ + +PD+I +QE +                  D  
Sbjct: 364 KFVTWNANSFLLRVKNDWSQFSKFVSDFDPDVIAVQEVRMPAAGGKGKPKNPEELSDDTK 423

Query: 45  FPFETLQSL----------NYHIETCGQKSYN-GVAILSKYQPIEIVTHLPGDDLDVQAR 93
              E  Q L          NY +      S   G A+L K        +   D L  +  
Sbjct: 424 VLREEKQILTRALSSPPFGNYRVWWSLADSKYAGTALLVKKCFKPKKVYFNLDKLASKHE 483

Query: 94  FIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGD 153
                     +T R+ N Y P+           +                 ++PLI+ GD
Sbjct: 484 PDGRVILAEFETFRLLNTYSPNNGWKEEEN-SFQRRRKWDKRIVEFLNKTSDKPLIWCGD 542

Query: 154 YNIIPQPHDCYNPIIW---------------ENDACFTL-EVRQSFQKLQNMGFTDAIRA 197
            N+  +  D  +P  +                    FT  E R+  + ++     DA R 
Sbjct: 543 LNVSHEEIDVSHPEFFATAKLNGYVPPNKEDCGQPGFTPSERRRFGETMKEGMLVDAYRY 602

Query: 198 THDTHHLYSFWDYYADSWSKNKG--IRIDHIMLSPEATSLLHSARIDTKPRGWT----KP 251
            H    + S + +  +   K +G  +RID+ ++S +    + S ++    RG        
Sbjct: 603 LHKEQDMESGFSWSGNPIGKYRGKRMRIDYFLVSEQLKDRIVSCKMH--GRGIELEGFYG 660

Query: 252 SDHTPVIVSLDIPEPRKKQQDSTS 275
           SDH PV + L  P    +Q   ++
Sbjct: 661 SDHCPVTLELSKPSSETEQNQVSN 684


>gi|226326255|ref|ZP_03801773.1| hypothetical protein PROPEN_00097 [Proteus penneri ATCC 35198]
 gi|225205333|gb|EEG87687.1| hypothetical protein PROPEN_00097 [Proteus penneri ATCC 35198]
          Length = 151

 Score =  106 bits (263), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 40/148 (27%), Positives = 57/148 (38%), Gaps = 7/148 (4%)

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE------NDACFT 176
            +  K  +      + +  L+   P++  GD NI P   D                  F 
Sbjct: 4   NFQQKKKFYADLQNYLTASLKPTSPVLIMGDLNISPTDKDIGIGENNMKRWLKTGKCSFL 63

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E R+    L   G TD  R  H      +S++DY +  +  N+G+RID ++ S      
Sbjct: 64  PEEREWLATLMGWGLTDTFRQQHPEADDKFSWFDYRSKGFDDNRGLRIDLLLASRCLADN 123

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             S  ID   RG  KPSDH PV     I
Sbjct: 124 CISTGIDYDIRGMEKPSDHAPVWAEFKI 151


>gi|325067220|ref|ZP_08125893.1| exodeoxyribonuclease III [Actinomyces oris K20]
          Length = 163

 Score =  106 bits (263), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 47/160 (29%), Positives = 77/160 (48%), Gaps = 5/160 (3%)

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIF--AGDYNIIPQPHD 162
            +R+ +LY+P+G  +T   Y  K+ W++      +  LE E  L     GD+N+ P+  D
Sbjct: 7   PVRLWSLYVPNGRELTHPHYTYKLDWLRVLRDDVAAWLEAEPDLPLALVGDWNVAPRDED 66

Query: 163 CYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR 222
            ++  ++E     +   RQ+F      G  +  R   +    Y++WDY    + +N+G+R
Sbjct: 67  VWDMSVFEGATHVSAPERQAFAAFAEAGMREVTR---ERVTNYTYWDYQKLRFPRNEGMR 123

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
           ID +  SP     +  A ID   R     SDH PV+V LD
Sbjct: 124 IDFVYASPALAGRVTGAAIDRDERKGKGASDHVPVMVELD 163


>gi|315282772|ref|ZP_07871102.1| exodeoxyribonuclease III [Listeria marthii FSL S4-120]
 gi|313613576|gb|EFR87390.1| exodeoxyribonuclease III [Listeria marthii FSL S4-120]
          Length = 108

 Score =  105 bits (261), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 34/112 (30%), Positives = 52/112 (46%), Gaps = 5/112 (4%)

Query: 153 DYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYY 211
           D N+     D  NP     +A F+ E R  F    + GF D+ R  +      YS+W Y 
Sbjct: 1   DLNVAHAEIDLKNPKTNRKNAGFSDEERAKFSAFLDAGFIDSFRYFYPDLTDAYSWWSYR 60

Query: 212 ADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            ++ ++N G RID+ ++S      L  A+I     G    SDH PV + L++
Sbjct: 61  MNARARNTGWRIDYFVVSERLKDKLVDAKIHADVLG----SDHCPVELELNL 108


>gi|255026927|ref|ZP_05298913.1| hypothetical protein LmonocytFSL_12426 [Listeria monocytogenes FSL
           J2-003]
          Length = 178

 Score =  105 bits (261), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 43/181 (23%), Positives = 78/181 (43%), Gaps = 8/181 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      + +E + DI CLQETK ++     +     +Y      +
Sbjct: 1   MKLISWNVNGLRAAVKKGFLEYFEEADADIFCLQETKLQEGQIELDLPAYKDY-WNYAVK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +P+ +   L   + D + R I   F                 +     
Sbjct: 60  KGYSGTAIFTKVEPLSVQYGLGIPEHDTEGRVITLEFEEF-----FMVTVYTPNSQAELK 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           + D ++++    L +    L+  +P++  GD N+  +  D  NP     +A F+ E R  
Sbjct: 115 RLDYRMTFEDAILEYVK-NLDNTKPVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAK 173

Query: 183 F 183
           F
Sbjct: 174 F 174


>gi|163790917|ref|ZP_02185341.1| exodeoxyribonuclease [Carnobacterium sp. AT7]
 gi|159873870|gb|EDP67950.1| exodeoxyribonuclease [Carnobacterium sp. AT7]
          Length = 201

 Score =  104 bits (260), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 50/201 (24%), Positives = 84/201 (41%), Gaps = 8/201 (3%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA I         E + D  CLQETK ++    F+     +Y      +
Sbjct: 1   MKFISWNVNGLRAIIKKGFMDIFNELDADFFCLQETKLQEGQIEFKVPGYYDY-WNYAEK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K++P+ +   +   + D + R I  ++                 +     
Sbjct: 60  KGYSGTAIFTKHKPLSVTYGIGKPEHDQEGRVITLSYPD-----YYVVTCYTPNSKSELK 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           + D ++ W   FL +    L+ E+P+I  GD N+  +  D  N    +  A F+ E R  
Sbjct: 115 RLDYRMEWEDDFLSYLK-TLDTEKPVILCGDLNVAHENIDLKNWKTNQKSAGFSEEERLK 173

Query: 183 FQKLQNMGFTDAIRATHDTHH 203
           F  L + GF D  R  +    
Sbjct: 174 FSTLLDNGFIDTFRYFYPNKE 194


>gi|42565714|ref|NP_566904.2| endonuclease/exonuclease/phosphatase family protein [Arabidopsis
           thaliana]
 gi|53828525|gb|AAU94372.1| At3g48425 [Arabidopsis thaliana]
 gi|55733769|gb|AAV59281.1| At3g48425 [Arabidopsis thaliana]
          Length = 364

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 59/324 (18%), Positives = 105/324 (32%), Gaps = 56/324 (17%)

Query: 5   TVATWNVNSIRARIH----NLAAWIKENNPDIICLQETKT-------------------- 40
              TWN NS   R+       + ++ + +PD+I +QE +                     
Sbjct: 44  KFMTWNANSFLLRVKNDWSQFSKFVSDFDPDVIAIQEVRMPAAGGKGKPKNHEELSDDTK 103

Query: 41  ---EDKNFPFETL--QSLNYH--IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR 93
              E+K      L       +    +     Y G A+L K        +   D L  +  
Sbjct: 104 VLREEKQILTRALSSPPFGNYGVWWSLADSKYAGTALLVKKCFKPRKVYFNLDKLASKHE 163

Query: 94  FIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGD 153
                     +T R+ N Y P+           +                 ++PLI+ GD
Sbjct: 164 PDGRVILAEFETFRLLNTYSPNNGWKDEEN-AFQRRRKWDKRIVEFLNKTSDKPLIWCGD 222

Query: 154 YNIIPQPHDCYNPIIW---------------ENDACFTL-EVRQSFQKLQNMGFTDAIRA 197
            N+  +  D  +P  +                    FT  E  +    ++     DA R 
Sbjct: 223 LNVSHEEIDVSHPEFFATAKLNGYVPPNKEDCGQPGFTPSERGRFGATIKEGRLVDAYRY 282

Query: 198 THDTHHLYSFWDYYADSWSKNKG--IRIDHIMLSPEATSLLHSARIDTKPRGWT----KP 251
            H    + S + +  +   K +G  +RID+ ++S +    + S ++    RG        
Sbjct: 283 LHKEQEMESGFSWSGNPIGKYRGKRMRIDYFLVSEQLKDRIVSCKMH--GRGIELEGFHG 340

Query: 252 SDHTPVIVSLDIPEPRKKQQDSTS 275
           SDH PV + L  P    +Q   ++
Sbjct: 341 SDHCPVTLELSKPSSEMEQNQVSN 364


>gi|119503531|ref|ZP_01625614.1| Exonuclease III [marine gamma proteobacterium HTCC2080]
 gi|119460593|gb|EAW41685.1| Exonuclease III [marine gamma proteobacterium HTCC2080]
          Length = 282

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 55/265 (20%), Positives = 104/265 (39%), Gaps = 17/265 (6%)

Query: 4   VTVATWNVNSI-RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET--- 59
           + V +  V  + +A+   L  W+ E + D++CLQ+T+  +     +     NY       
Sbjct: 30  MKVVSLVVEGLEQAQKAGLFDWLHEEDADVVCLQDTRCSEYTLKGDVYFPENYSPYFLDD 89

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
                 NGVAI  K  P  I+T L   D D +  +I+A +   +    +           
Sbjct: 90  FENPKRNGVAIYCKKLPKAIMTGLGFADFDSRGLYIQADYPNISVGSLLIP-----SGQA 144

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                + K+ ++++  +   +        I  G + +I Q  D        +   F+   
Sbjct: 145 GDEAMNTKLKFLEQLGQHLQKVKNKRRDFIICGGWELIGQSIDAEEAGNRTDIPGFSSIE 204

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           +   Q+L   G+ DA R+ + +   +++W    D+ +    +R D  + S      + SA
Sbjct: 205 QAWLQELYQNGYCDAFRSINVSSEEFTWWPEGDDAGA----LRSDTHITSLSLEGRVDSA 260

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIP 264
            I+T        S H PVI+  D+ 
Sbjct: 261 VINTD----DAFSSHAPVIIEYDVD 281


>gi|327261945|ref|XP_003215787.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase 2-like [Anolis
           carolinensis]
          Length = 530

 Score =  104 bits (258), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 68/322 (21%), Positives = 101/322 (31%), Gaps = 50/322 (15%)

Query: 4   VTVATWNVNSIRARIHNLAA--WIKENNPDIICLQETKTEDKNF--PFETLQSLN-YHIE 58
           + + +WNVN +RA          +     D+ICLQETK        P   ++  N Y   
Sbjct: 1   MRLLSWNVNGLRAGAGAAGLKPLLDALGADVICLQETKITRDLLEEPLAVVEGYNAYFSF 60

Query: 59  TCGQKSYNGVAI------------------LSKYQPIEIVTHLPGDDLDVQ--------- 91
           +  +  Y+GVA                    +K++        PGD    +         
Sbjct: 61  SRTRSGYSGVATFCKATATPEAAEEGLSGLWTKHEGAIGCYGAPGDFTTEELQALDSEGR 120

Query: 92  ---ARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPL 148
               R    T      TL + N+Y P  +P    + + K+ +       A   L     +
Sbjct: 121 AVITRHRICTSEQQETTLTVVNVYCPRADPEKPERGEFKLRFYHLLQARAEALLRAGGHV 180

Query: 149 IFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN--------MGFTDAIRATHD 200
           +  GD N   +P D  +P                   L            F D  R  H 
Sbjct: 181 VIMGDINTAHKPIDHCDPGDL-ESFQEHPGRNWLDGFLWEPGKESPHGELFVDTFRFLHP 239

Query: 201 THHL-YSFWDYYADSWSKNKGIRIDHIMLSPEAT-SLLHSARIDTKPRGWTKPSDHTPVI 258
           T    Y+ W     S   N G RID+I+       S L  A++  +  G    SDH PV 
Sbjct: 240 TQKEAYTCWCNVTGSRHLNYGTRIDYILADRALALSELKEAQLRPEVFG----SDHCPVQ 295

Query: 259 VSLDIPEPRKKQQDSTSQNMKP 280
             L        +         P
Sbjct: 296 AVLKSVCLGAPRCPPLCTRFLP 317


>gi|213423897|ref|ZP_03356877.1| exonuclease III [Salmonella enterica subsp. enterica serovar
          Typhi str. E01-6750]
          Length = 90

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 33/82 (40%), Positives = 51/82 (62%)

Query: 4  VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
          +   ++N+N +RAR H L A ++++ PD+I LQETK  D+ FP E +  L Y++   GQK
Sbjct: 1  MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDEMFPLEEVAKLGYNVFYHGQK 60

Query: 64 SYNGVAILSKYQPIEIVTHLPG 85
           + GVA+L+K  PI +    P 
Sbjct: 61 GHYGVALLTKATPISVRRGFPD 82


>gi|164429579|ref|XP_964325.2| hypothetical protein NCU01961 [Neurospora crassa OR74A]
 gi|157073536|gb|EAA35089.2| hypothetical protein NCU01961 [Neurospora crassa OR74A]
          Length = 630

 Score =  103 bits (257), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 47/281 (16%), Positives = 88/281 (31%), Gaps = 37/281 (13%)

Query: 21  LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC---GQKSYNGVAILSKYQPI 77
           + A     + DI+ +QETK + K+   + +    + +       +K Y+GVAI ++    
Sbjct: 27  VKAMFDTLDADIVVIQETKIQRKDLRDDMVLVPGWDVYFNLPTYKKGYSGVAIYTRSSKC 86

Query: 78  EIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP--------HGNPITSTKYDDKIS 129
             +    G    +        F       +IG    P             +  + + + +
Sbjct: 87  CPIRAEEGITGVLCPPNSSTKFRDLPADQQIGGYPTPGQLSSDIDEAQLDSEGRIEFRQA 146

Query: 130 WIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNM 189
           +I          + L + +   GD NII    D             TL+   S    + +
Sbjct: 147 FIDAMDARVRNLVSLGKEVFLCGDLNIIRNEMDTAGLPEQLKKEAMTLDQFISTPSRRFL 206

Query: 190 G---------------------FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
                                 +            +Y+ W+   ++   N G RID+++ 
Sbjct: 207 NQIVFGGRVIGEPDEGREKPVLWDLCREFHPKRPGMYTCWETRKNARPGNFGSRIDYVLC 266

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKK 269
           S         A I     G    SDH PV  ++     R+ 
Sbjct: 267 SSGIKDWFVDANIQEGLLG----SDHCPVYATIS-DSVRRD 302


>gi|121727142|ref|ZP_01680316.1| exodeoxyribonuclease III [Vibrio cholerae V52]
 gi|153818870|ref|ZP_01971537.1| exodeoxyribonuclease III [Vibrio cholerae NCTC 8457]
 gi|121630520|gb|EAX62912.1| exodeoxyribonuclease III [Vibrio cholerae V52]
 gi|126510598|gb|EAZ73192.1| exodeoxyribonuclease III [Vibrio cholerae NCTC 8457]
          Length = 171

 Score =  103 bits (256), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 40/162 (24%), Positives = 64/162 (39%), Gaps = 7/162 (4%)

Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------H 161
           +   +    N    TK+  K  + +  + +  +     E L+  GD NI P         
Sbjct: 10  LNGYFPQGDNVEHETKFPYKRQFYRDLMTYLREHRSNSERLVVMGDINISPLDLDIGIGE 69

Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKG 220
                 +      F  E R+  Q L + G  D  R  H      +S++DY +  +  N+G
Sbjct: 70  ANRKRWLQTGKCSFQPEEREWLQTLLDWGLVDTFRQLHPDVSDQFSWFDYRSRGFEDNRG 129

Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
           +RID I+ +P        A ID + R   KPSDH P+  +  
Sbjct: 130 LRIDVILATPTLAETCQEAGIDYELRAIDKPSDHAPIWTTFK 171


>gi|291533503|emb|CBL06616.1| exodeoxyribonuclease III (xth) [Megamonas hypermegale ART12/1]
          Length = 151

 Score =  102 bits (254), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 40/138 (28%), Positives = 60/138 (43%), Gaps = 5/138 (3%)

Query: 127 KISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL 186
                +   R     L  ++P++  GD N+  +  D  NP      A FT E R    +L
Sbjct: 18  YRMQWEDAFRNYLVELNKQKPVVMCGDLNVAHKEIDLKNPKTNRRSAGFTDEERSKMTEL 77

Query: 187 QNMGFTDAIRATHDTHH-LYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKP 245
              GF D  R  +     +YS+W Y   +   N G RID+ ++S +  + +  A I  + 
Sbjct: 78  LQAGFVDTFRYLYPDKTSIYSWWSYMRKARENNAGWRIDYFIVSKDIETNIKEAGIHNEF 137

Query: 246 RGWTKPSDHTPVIVSLDI 263
            G    SDH PV + LDI
Sbjct: 138 FG----SDHCPVSLELDI 151


>gi|313608204|gb|EFR84229.1| exodeoxyribonuclease III [Listeria monocytogenes FSL F2-208]
          Length = 102

 Score =  102 bits (253), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 5/105 (4%)

Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKN 218
             D  NP     +A F+ E R  F    + GF D+ R  +      YS+W Y  ++ ++N
Sbjct: 2   EIDLKNPKTNRKNAGFSDEERAKFSAFLDAGFIDSFRYFYPDLTDAYSWWSYRMNARARN 61

Query: 219 KGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            G RID+ ++S      L  A+I     G    SDH PV + L++
Sbjct: 62  TGWRIDYFVVSERLKDKLVDAKIHADVLG----SDHCPVELELNL 102


>gi|294949245|ref|XP_002786115.1| Apurinic endonuclease-redox protein, putative [Perkinsus marinus
           ATCC 50983]
 gi|239900243|gb|EER17911.1| Apurinic endonuclease-redox protein, putative [Perkinsus marinus
           ATCC 50983]
          Length = 372

 Score =  101 bits (252), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 48/273 (17%), Positives = 93/273 (34%), Gaps = 25/273 (9%)

Query: 9   WNVNSIRA----RIHNLAAWIKENNPDIICLQETKTEDKN-------FPFETLQSL--NY 55
           WNV S+R+    ++  L    K+  PD++   E K  +++          E ++ +    
Sbjct: 94  WNVGSLRSLLNHKVKELTDLCKKEQPDVLGFMEIKLSNEDMCEECDNLLREAVEDILGPV 153

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
            I      +  G +  +               +D        T  +    + +   Y+P+
Sbjct: 154 EIVWNHCTAKKGYSGTAFVVRKSAGKFDSKLGIDGHEDPEGRTIALEFDDMVVVLCYVPN 213

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN---D 172
                +              + A      ++P +  GD N+  +  D +N          
Sbjct: 214 SGQDLNRLAHRTSGKECFDAKLAKYCGSFDKPTLLLGDMNVADRDVDIWNVDKPHIPKSA 273

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
                E     +   + GFTD     H      +S+W   A +  KN+G+R+D+++ +P 
Sbjct: 274 GTTNEERESFREHYTSKGFTDTFVNMHPEATGCFSYWSVRARNKPKNRGLRLDYVITAPG 333

Query: 232 A-TSLLHSARIDTK--PRGWTKPSDHTPVIVSL 261
                +  A I     P G     DH PV ++ 
Sbjct: 334 FPMDKIKDAFILEDFAPHG-----DHCPVGITF 361


>gi|307185028|gb|EFN71257.1| Recombination repair protein 1 [Camponotus floridanus]
          Length = 232

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 49/262 (18%), Positives = 87/262 (33%), Gaps = 59/262 (22%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFET-LQSLNYHIETCG 61
           + + TWNV+ IRA I  N   +I + + DI+ LQETK +    P E  L   +++     
Sbjct: 28  LKICTWNVSGIRAVIKKNGMDYIIKEDADIVALQETKCDKDKLPNEVKLPGYHHYFVDSK 87

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +  Y GVA+ SK +PI +   L   D D + R I A F                      
Sbjct: 88  KPGYCGVALFSKEKPISVKYGLNNSDFDSEGRMITAEF---------------------P 126

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
             +   +          +     EE                                   
Sbjct: 127 EFFIVNVYLKNPKTNTKNAGFTKEERGDMTDFLATGFID--------------------- 165

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
                    F          +  +S++   A++ +K+ G R+D+ ++S    + +    I
Sbjct: 166 --------TFRLLYPDKEGAYTFWSYF---ANARNKDIGWRLDYFLVSERMKNKVCDNVI 214

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
             +  G        PV + +++
Sbjct: 215 RKQVYGRDNW----PVKLFINL 232


>gi|237757109|ref|ZP_04585546.1| exodeoxyribonuclease III [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237690734|gb|EEP59905.1| exodeoxyribonuclease III [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 196

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 68/198 (34%), Positives = 103/198 (52%), Gaps = 6/198 (3%)

Query: 4   VTVATWNVNSIRARIHNLAAWI--KENNPDIICLQETKTEDKNFPFETLQSLNY-HIETC 60
           + + T+NVNSI+AR   +  W+  + N+ D++C QE K EDKNFPFE  + L Y + +  
Sbjct: 1   MKICTFNVNSIKARKDLVIEWLNHRNNDIDVLCFQEIKVEDKNFPFEDFKKLGYVYQDIS 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           GQK YNGVA LSK +       L  +  DVQ R +     I  + + + N Y PHG+   
Sbjct: 61  GQKGYNGVATLSKLEISHYQKGLNHEYFDVQKRVLID--KITEKEIFVINTYAPHGDLRG 118

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIF-AGDYNIIPQPHDCYNPIIWENDACFTLEV 179
             KY  K+ W K F+ F  +  + +   +   GD NI  +  D Y+P++  +      E 
Sbjct: 119 GEKYYYKLDWYKHFINFLKENFDFDNQKVILLGDLNIALEDIDVYDPVLLTDSIGTMPEE 178

Query: 180 RQSFQKLQNMGFTDAIRA 197
           R+  ++L N+G  D  R 
Sbjct: 179 RELLRQLLNLGLIDTFRN 196


>gi|328464771|gb|EGF36088.1| exodeoxyribonuclease III [Lactobacillus rhamnosus MTCC 5462]
          Length = 152

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 41/133 (30%), Positives = 60/133 (45%), Gaps = 4/133 (3%)

Query: 127 KISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL 186
                 R     +  L  ++PL++ GD N+  +P D  N     ++A FT E R  F K 
Sbjct: 18  YRQQWDRDFLAYTNELAAKKPLVYCGDLNVAHEPIDLKNDKTNHHNAGFTDEERADFTKQ 77

Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR 246
            N GF D  R  +     YS+W Y   + + N G RID+ + S      +  A+I T+  
Sbjct: 78  LNSGFIDTFRHFYPDTVTYSWWSYRFHARANNAGWRIDYFVASSAFQPYIQDAKILTQIM 137

Query: 247 GWTKPSDHTPVIV 259
           G    SDH PV +
Sbjct: 138 G----SDHCPVEL 146


>gi|115488172|ref|NP_001066573.1| Os12g0279600 [Oryza sativa Japonica Group]
 gi|77554323|gb|ABA97119.1| exodeoxyribonuclease III family protein, expressed [Oryza sativa
           Japonica Group]
 gi|113649080|dbj|BAF29592.1| Os12g0279600 [Oryza sativa Japonica Group]
 gi|215687325|dbj|BAG91875.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222616909|gb|EEE53041.1| hypothetical protein OsJ_35763 [Oryza sativa Japonica Group]
          Length = 379

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 53/324 (16%), Positives = 94/324 (29%), Gaps = 61/324 (18%)

Query: 5   TVATWNVNSIRARIH----NLAAWIKENNPDIICLQETKTE----------DKNFPFE-- 48
              TWN NS+  R+         ++   +PD+IC+QE +                  +  
Sbjct: 61  RFVTWNANSLLLRMKSDWPAFCQFVSRVDPDVICVQEVRMPAAGSKGAPKNPGQLKDDTS 120

Query: 49  ----------------TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQA 92
                             +           K      I+ K    + V+           
Sbjct: 121 SSRDEKQVVLRALSSPPFKDYRVWWSLSDSKYAGTAMIIKKKFEPKKVSFNLDRTSSKHE 180

Query: 93  RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG 152
                        L +      +G       +  +  W KR L F     ++++PLI+ G
Sbjct: 181 PDGRVIIAEFESFLLLNTYAPNNGWKEEENSFQRRRKWDKRMLEFVQ---QVDKPLIWCG 237

Query: 153 DYNIIPQPHDCYNPII------WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYS 206
           D N+  +  D  +P                 +  Q    L        I +       Y 
Sbjct: 238 DLNVSHEEIDVSHPDFFSSAKLNGYIPPNKEDCGQPGFTLSERRRFGNILSQGKLVDAYR 297

Query: 207 F------------WDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT----K 250
           +            W  +     + K +RID+ ++S +    + S  I    RG       
Sbjct: 298 YLHKEKDMDCGFSWSGHPIGKYRGKRMRIDYFLVSEKLKDQIVSCDIH--GRGIELEGFY 355

Query: 251 PSDHTPVIVSL--DIPEPRKKQQD 272
            SDH PV + L  ++  P+ K  +
Sbjct: 356 GSDHCPVSLELSEEVEAPKPKSSN 379


>gi|189235831|ref|XP_966759.2| PREDICTED: similar to ap endonuclease, partial [Tribolium
           castaneum]
          Length = 344

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 49/212 (23%), Positives = 84/212 (39%), Gaps = 10/212 (4%)

Query: 6   VATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETCGQ 62
           + TWNV  +R+ +       +K + PDI+C+QETK      P E      Y     +  +
Sbjct: 139 ITTWNVGGLRSWLKKGCLDILKYDEPDILCIQETKCAVDKLPEEVKTIEGYETLWCSSDK 198

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
             Y GV I+ K +P+ ++  +   + D + R I   +        +       G  + + 
Sbjct: 199 DGYAGVGIMVKDKPLNVIYGIDSKEHDTEGRCITVEYET---FFVVNVYVPNAGRKLVTL 255

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
               K            + L+ ++P+I  GD N+  +  D  NP     +A FT+E R  
Sbjct: 256 P---KRLDWNEQFEKFIKNLDSQKPVIICGDMNVAHKEIDLANPKTNTKNAGFTVEERDG 312

Query: 183 FQKLQNMGFTDAIRATHD-THHLYSFWDYYAD 213
                  G+ D  R  +      Y+FW Y  +
Sbjct: 313 MTAFLGNGYVDIYRHLYPEKEKAYTFWTYMGN 344


>gi|242078097|ref|XP_002443817.1| hypothetical protein SORBIDRAFT_07g002730 [Sorghum bicolor]
 gi|241940167|gb|EES13312.1| hypothetical protein SORBIDRAFT_07g002730 [Sorghum bicolor]
          Length = 369

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 55/311 (17%), Positives = 92/311 (29%), Gaps = 59/311 (18%)

Query: 5   TVATWNVNSIRARIH----NLAAWIKENNPDIICLQETKTE------------------- 41
              TWN NS+  R+       +  +   +PD+IC+QE +                     
Sbjct: 50  KFLTWNANSLLLRMKSDWPAFSQLVARLDPDVICVQEVRMPAAGSKGAPKNPSELKDDTS 109

Query: 42  ----DKN-----FPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQA 92
               +K            +           K       + K    + V+           
Sbjct: 110 SSRDEKQVVLRALSTSPFKDYRVWWSLSDSKYAGTAMFIKKKFEPKKVSFNLDRTSSKHE 169

Query: 93  RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG 152
                        L +      +G       +  +  W KR L F       ++PLI+ G
Sbjct: 170 TDGRVIIAEFESFLLLNTYAPNNGWKEEENSFQRRRKWDKRMLEFVQHV---DKPLIWCG 226

Query: 153 DYNIIPQPHDCYNPIIW---------------ENDACFTL-EVRQSFQKLQNMGFTDAIR 196
           D N+  +  D  +P  +                    FT  E R+    L      DA R
Sbjct: 227 DLNVSHEEIDVSHPDFFSSAKLNGYTPPNQEDCGQPGFTPAERRRFGNILFQGKLVDAYR 286

Query: 197 ATHDTHHLYSFWDYYADSWSKNKG--IRIDHIMLSPEATSLLHSARIDTKPRGWT----K 250
             H    +   + +      K +G  +RID+ ++S +    + S  +    RG       
Sbjct: 287 HLHKEKDMDGGFSWSGHPIGKYRGKRMRIDYFLVSEQLKDRIVSCEMH--GRGIELDGFY 344

Query: 251 PSDHTPVIVSL 261
            SDH PV + L
Sbjct: 345 GSDHCPVTLEL 355


>gi|320163021|gb|EFW39920.1| apurinic/apyrimidinic endonuclease 2 [Capsaspora owczarzaki ATCC
           30864]
          Length = 734

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 46/305 (15%), Positives = 81/305 (26%), Gaps = 50/305 (16%)

Query: 21  LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEI- 79
           L   +     DI+C QETK        E      Y        + +G + ++     +  
Sbjct: 207 LFQLLDALQADIVCFQETKLTAAQVTEEMALVDGYDAFFSFSIAKDGYSGIATPIAAQDG 266

Query: 80  -----------------------------------VTHLPGDDLDVQARFIEATFTINTQ 104
                                                      +             +  
Sbjct: 267 LTGRRVVKPPEPSSASVTSVPLQTGDVIKPDGLLPDYSDMDPTVLDALDSEGRCVVTDHD 326

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
              + NLY P  +     +   K  + +      +        +I AGD+N+  +  D  
Sbjct: 327 RFVLFNLYCPRADSAEGERMTFKQEFYRVLQLRVNALRTAGRCVIVAGDFNLTHRRIDHC 386

Query: 165 NPIIWENDACFTLEVRQ----SFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNK 219
           +P  +  D               +     G  D  R  H      Y+ W     +   N 
Sbjct: 387 DPENYTTDDGSVDFEAHPSRRWMESFLAEGRVDCFRHFHPLLSSRYTCWRVDTRARETNY 446

Query: 220 GIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV----SLDIPEPRKKQQDSTS 275
           G RID+I+        +      T+  G    SDH PV++    +L +  P++       
Sbjct: 447 GTRIDYIVTDQALLPDISGCYHLTRFPG----SDHCPVVITAAPTLRLTIPQRNP-PKLC 501

Query: 276 QNMKP 280
               P
Sbjct: 502 ARYLP 506


>gi|87303227|ref|ZP_01086020.1| Exodeoxyribonuclease III xth [Synechococcus sp. WH 5701]
 gi|87282122|gb|EAQ74083.1| Exodeoxyribonuclease III xth [Synechococcus sp. WH 5701]
          Length = 117

 Score =  101 bits (251), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 32/85 (37%), Positives = 42/85 (49%)

Query: 188 NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRG 247
           +    D  R        +S+WDY + +W ++ G RIDHI LS E        RI    RG
Sbjct: 21  DERQADVFRLFEPDSGHWSWWDYRSGAWDRDSGWRIDHIYLSEELQERATGCRIQKAVRG 80

Query: 248 WTKPSDHTPVIVSLDIPEPRKKQQD 272
             KPSDH PV+V L  P   +K +D
Sbjct: 81  NDKPSDHAPVVVQLQWPPESEKNED 105


>gi|189238808|ref|XP_001815482.1| PREDICTED: similar to ap endonuclease, partial [Tribolium castaneum]
          Length = 1545

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/227 (18%), Positives = 79/227 (34%), Gaps = 17/227 (7%)

Query: 38   TKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA 97
            TK+     P         +            + L K     +    P      + +    
Sbjct: 1335 TKSPKGKAP---------NFHITTWNVDGLRSWLKKGCLDILKYDKPDILCIQETKCAVY 1385

Query: 98   TFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII 157
                  +T+ + + +L  G  + +     K            + L+ ++P+I  GD N+ 
Sbjct: 1386 KLPEEVKTIEVIHSHLLTGRNLVTLP---KRLDWNEQFEKFIKNLDSQKPVIICGDMNVA 1442

Query: 158  PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWS 216
             +  D  NP    N A F++E R         G+ D  R  +      Y+FW Y  ++  
Sbjct: 1443 HKEIDLANPKTNTNSAGFSVEERDGMTAFLGNGYVDIYRHLYPEKEKAYTFWIYMRNARP 1502

Query: 217  KNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             N G R+D+ ++S      +    I +   G    SDH P+ + + I
Sbjct: 1503 NNVGWRLDYFLVSQRFVDNVCDNIIHSDVMG----SDHCPLSLHIQI 1545



 Score = 67.1 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)

Query: 6    VATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFET 49
            + TWNV+ +R+ +       +K + PDI+C+QETK      P E 
Sbjct: 1347 ITTWNVDGLRSWLKKGCLDILKYDKPDILCIQETKCAVYKLPEEV 1391


>gi|86356381|ref|YP_468273.1| exodeoxyribonuclease III protein [Rhizobium etli CFN 42]
 gi|86280483|gb|ABC89546.1| probable exodeoxyribonuclease III protein [Rhizobium etli CFN 42]
          Length = 90

 Score =  100 bits (249), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 49/87 (56%), Positives = 61/87 (70%)

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
             + RQ+F++L+N+G TDA+RAT D   LYSFWDY A +W KN GIRIDH++LSPEA   
Sbjct: 1   MPQTRQAFRRLENLGLTDAVRATTDATRLYSFWDYQAGAWPKNNGIRIDHLLLSPEAADR 60

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262
           + SA I+   R W KPSDH PVI   D
Sbjct: 61  MTSAAIEKHVRAWEKPSDHVPVIAYFD 87


>gi|23010906|ref|ZP_00051436.1| COG0708: Exonuclease III [Magnetospirillum magnetotacticum MS-1]
          Length = 155

 Score = 99.9 bits (247), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 55/137 (40%), Positives = 85/137 (62%), Gaps = 3/137 (2%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + TWNVNSI+ R+ +L  ++ E  PD++CLQE K +D++FP   +++  Y +ET GQK
Sbjct: 1   MRITTWNVNSIKQRVGHLLGFLDEAKPDVVCLQELKCQDESFPRAEIEAAGYAVETLGQK 60

Query: 64  SYNGV--AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ-TLRIGNLYLPHGNPIT 120
           +YNGV   + +  Q  E++  LPGD  D QAR+IEA         +RI ++YLP+GNP  
Sbjct: 61  AYNGVALLVRTPLQYTELLRGLPGDAEDGQARYIEALVQGEGVAPVRIASIYLPNGNPAP 120

Query: 121 STKYDDKISWIKRFLRF 137
             KY  K++++ R    
Sbjct: 121 GPKYSYKLAFMARLRTH 137


>gi|302519814|ref|ZP_07272156.1| exodeoxyribonuclease III [Streptomyces sp. SPB78]
 gi|302428709|gb|EFL00525.1| exodeoxyribonuclease III [Streptomyces sp. SPB78]
          Length = 191

 Score = 99.5 bits (246), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 40/185 (21%), Positives = 69/185 (37%), Gaps = 4/185 (2%)

Query: 1   MSVVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           M+V+ V + NVN +RA        W+   + D++CLQE + E    P E  +   +    
Sbjct: 1   MTVLIVTSVNVNGLRAAAKKGFTEWLAGTSADVLCLQEVRAEAHQLPEEVARPEGWFSLH 60

Query: 60  CG--QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
                K   GV++ ++ +P  + T     + D   R++EA     T    +       G 
Sbjct: 61  APAADKGRAGVSLYTRREPDRVRTGFGSAEFDGSGRYVEADLPGVTVA-SLYLPSGEVGT 119

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
                KY     ++        +       ++  GD+NI     D  N      +A F  
Sbjct: 120 ERQEQKYRFMDEFLTYLKELRERAAAEGREVLVCGDWNIAHTEADLKNWRGNRKNAGFLP 179

Query: 178 EVRQS 182
           E R+ 
Sbjct: 180 EEREW 184


>gi|226531290|ref|NP_001144669.1| hypothetical protein LOC100277695 [Zea mays]
 gi|195645474|gb|ACG42205.1| hypothetical protein [Zea mays]
 gi|238007716|gb|ACR34893.1| unknown [Zea mays]
          Length = 373

 Score = 99.5 bits (246), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 55/311 (17%), Positives = 92/311 (29%), Gaps = 59/311 (18%)

Query: 5   TVATWNVNSIRARIH----NLAAWIKENNPDIICLQETKTE------------------- 41
              TWN NS+  R+       +  +   +PD+IC+QE +                     
Sbjct: 52  KFLTWNANSLLLRMKSDWPAFSQLVARLDPDVICVQEVRMPAAGSKGAPKNPSELKDDTS 111

Query: 42  ----DKN-----FPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQA 92
               +K            +           K       + K    + V+           
Sbjct: 112 LSRDEKQVVLRALSASPFKDYRVWWSLSDSKYAGTAMFIKKKFEPKKVSFNLDRTSSKHE 171

Query: 93  RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG 152
                        L +      +G       +  +  W KR L F       ++PLI+ G
Sbjct: 172 ADGRVIIAEFESFLLLNTYSPNNGWKEEENAFQRRRKWDKRMLEFVQHV---DKPLIWCG 228

Query: 153 DYNIIPQPHDCYNPIIW---------------ENDACFTL-EVRQSFQKLQNMGFTDAIR 196
           D N+  +  D  +P  +                    FT  E R+    L      DA R
Sbjct: 229 DLNVSHEEIDVSHPDFFSSAKLNGYTPPNKEDCGQPGFTPAERRRFGNILFQGKLVDAYR 288

Query: 197 ATHDTHHLYSFWDYYADSWSKNKG--IRIDHIMLSPEATSLLHSARIDTKPRGWT----K 250
             H    +   + +      K +G  +RID+ ++S +    + S  +    RG       
Sbjct: 289 HLHKEKDIDGGFSWSGHPIGKYRGKRMRIDYFLVSEQLKDRIVSCEMH--GRGIELDGFY 346

Query: 251 PSDHTPVIVSL 261
            SDH PV + L
Sbjct: 347 GSDHCPVSLEL 357


>gi|205373614|ref|ZP_03226417.1| exodeoxyribonuclease [Bacillus coahuilensis m4-4]
          Length = 195

 Score = 99.1 bits (245), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 33/132 (25%), Positives = 62/132 (46%), Gaps = 5/132 (3%)

Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG 190
            +  ++    +L  ++P+IF GD N+     D  N    + ++ FT   R+    L ++G
Sbjct: 66  WEDLVQGYLDKLNQKKPVIFCGDLNVAHTELDVKNDRANQGNSGFTQVEREKMNGLLDLG 125

Query: 191 FTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT 249
           FTD  R  +      +++W Y      +N G RID+ ++S    + + ++ I     G  
Sbjct: 126 FTDTYRYFNPARDDQFTWWSYMKGVRERNIGWRIDYFIVSTSFMNTISNSDIHDHVYG-- 183

Query: 250 KPSDHTPVIVSL 261
             SDH P+++ L
Sbjct: 184 --SDHCPIVLEL 193


>gi|302824275|ref|XP_002993782.1| hypothetical protein SELMODRAFT_137611 [Selaginella moellendorffii]
 gi|300138378|gb|EFJ05148.1| hypothetical protein SELMODRAFT_137611 [Selaginella moellendorffii]
          Length = 351

 Score = 99.1 bits (245), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 57/312 (18%), Positives = 104/312 (33%), Gaps = 56/312 (17%)

Query: 5   TVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTEDKNF------PFETLQS-- 52
              +WN NS+  R  N    + ++I+  +PD+IC+QE +     F      P E      
Sbjct: 34  RFMSWNANSLLLRFKNNREEVMSFIRGFDPDVICIQEVRLPAAGFKGEKKNPGEIKDDSA 93

Query: 53  ------------------LNYHIETCGQKSYN-GVAILSKYQPIEIVTHLPGDDLDVQAR 93
                              +Y +     ++   G A+  K     +      D+    A+
Sbjct: 94  AARNDKQAVMRVLSVSPMADYSVWWSLGENKYAGTALFVKNCFKPVSVAFNIDNKGKDAQ 153

Query: 94  FIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLE-LEEPLIFAG 152
             E    I         L   +       + ++     + + +   + +    +PLI+ G
Sbjct: 154 RHEIDGRIILAEFGSFTLLNTYAPNNGWKEEENGFVRRRAWDKKVLEFVSSCSKPLIWCG 213

Query: 153 DYNIIPQPHDCYNPIIWENDACFTL----------------EVRQSFQKLQNMGFTDAIR 196
           D N+  Q  D  +P  + N                      E  +    L      D  R
Sbjct: 214 DLNVSHQEIDVTHPEFFANATQPGYTPPNKEDAGQPGFTLNERARFSTILNRGNLVDTYR 273

Query: 197 ATHDTHHLYSFWDYYADSWSKNKG--IRIDHIMLSPEATSLLHSARIDTKPRGWT----K 250
             H+   L + + +  +   K +G  +RID+ ++S      L S++I    RG       
Sbjct: 274 HLHEKQDLEAGFTWSGNPVGKYRGKRMRIDYFLISKALLPRLASSKIH--GRGIELEGFL 331

Query: 251 PSDHTPVIVSLD 262
            SDH P+ + L 
Sbjct: 332 GSDHCPLTMELK 343


>gi|325067231|ref|ZP_08125904.1| exodeoxyribonuclease III [Actinomyces oris K20]
          Length = 98

 Score = 99.1 bits (245), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 28/86 (32%), Positives = 45/86 (52%)

Query: 4  VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
          + +ATWNVNSIR R+  + A+++  + D + +QE K     FP E  ++  Y +   G  
Sbjct: 1  MRLATWNVNSIRTRVDRVLAFLEREDIDALAMQEIKCRPDQFPVEPFEAAGYELAIHGLN 60

Query: 64 SYNGVAILSKYQPIEIVTHLPGDDLD 89
           +NGVAI S+    ++ T  P     
Sbjct: 61 QWNGVAIASRVGLDDVATSFPSQPAW 86


>gi|325068218|ref|ZP_08126891.1| exodeoxyribonuclease III Xth [Actinomyces oris K20]
          Length = 154

 Score = 99.1 bits (245), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 52/149 (34%), Gaps = 3/149 (2%)

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
           G      KY        R     +   +    ++ AGD N++    D  N     N    
Sbjct: 5   GTEKMDQKYAHLELVDARMAELLAAARDGGSQVVMAGDLNVVRSERDIKNWKPNHNKIAG 64

Query: 176 TLEVRQSFQKLQNMGFTDAIRAT---HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
            ++   +  +                 +    Y++W     ++  N G RID+ +L+P  
Sbjct: 65  VMDEEIAHLEGWFASGWVDASRHLVGDEEQGPYTWWSQRGKAFDNNTGWRIDYQVLTPAL 124

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
               HS  +D  P   ++ SDH P++V  
Sbjct: 125 AERAHSVTVDRAPDYASRWSDHAPLVVEY 153


>gi|213420904|ref|ZP_03353970.1| exonuclease III [Salmonella enterica subsp. enterica serovar Typhi
           str. E01-6750]
          Length = 144

 Score = 98.7 bits (244), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 56/142 (39%), Gaps = 7/142 (4%)

Query: 129 SWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFTLEVRQS 182
            + +    +    L+ + P++  GD NI P         +     +      F  E R+ 
Sbjct: 3   QFYQNLQNYLETELKCDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREW 62

Query: 183 FQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             +L   G  D  R  +      +S++DY +  +  N+G+RID ++ S           I
Sbjct: 63  MSRLLKWGLVDTFRQANPQTMDKFSWFDYRSKGFVDNRGLRIDLLLASAPLAERCAETGI 122

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
           D   R   KPSDH PV  +  +
Sbjct: 123 DYDIRSMEKPSDHAPVWATFRV 144


>gi|255540403|ref|XP_002511266.1| ap endonuclease, putative [Ricinus communis]
 gi|223550381|gb|EEF51868.1| ap endonuclease, putative [Ricinus communis]
          Length = 326

 Score = 98.7 bits (244), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 39/275 (14%), Positives = 81/275 (29%), Gaps = 17/275 (6%)

Query: 4   VTVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           +   TWN NS+  R  N       ++   +PD+I +QE +                  +T
Sbjct: 42  LKFITWNANSLLLRAKNDWPEFTKFVSTLDPDVIAIQEVRMPAAGSKGAPKNPGELKDDT 101

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
              +    + + +   P      +     D +              +++       G   
Sbjct: 102 SSSREEKQILMRALSSPPFGSYKIWWSLADSKYAGTALLVKKRFHNIKVSFSLDKSGGDS 161

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY-----NPIIWENDAC 174
              K  DK              +   +  +   + ++                  + D  
Sbjct: 162 FREKKMDKRMLEFVVQLSDKPLIWCGDLNVSHEEIDVSHPEFFIAAKQNGYVPPNKEDCG 221

Query: 175 FT----LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG--IRIDHIML 228
                  E ++    L+     DA R  H    +   + +  +   K +G  +RID+ ++
Sbjct: 222 QPGFTLNERKRFGSILREGKLIDAYRFLHKEKDMERGFSWSGNPIGKYRGKRMRIDYFIV 281

Query: 229 SPEATSLLHSARIDTK--PRGWTKPSDHTPVIVSL 261
           S +    + S  +  +         SDH PV + L
Sbjct: 282 SEKLKGRIISCEMHGQGIELQGFYGSDHCPVSLEL 316


>gi|121730147|ref|ZP_01682543.1| ggdef family protein [Vibrio cholerae V52]
 gi|121628108|gb|EAX60646.1| ggdef family protein [Vibrio cholerae V52]
          Length = 63

 Score = 98.7 bits (244), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 24/63 (38%), Positives = 42/63 (66%)

Query: 4  VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
          + V ++N+N +RAR+H L A I ++ PD+I LQE K  D+ FP + ++++ Y +   GQK
Sbjct: 1  MKVISFNINGLRARLHQLQALIDKHQPDVIGLQEIKVHDEAFPRQEVEAMGYQVYFHGQK 60

Query: 64 SYN 66
          ++ 
Sbjct: 61 AHY 63


>gi|270009978|gb|EFA06426.1| hypothetical protein TcasGA2_TC009305 [Tribolium castaneum]
          Length = 1118

 Score = 98.7 bits (244), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 33/134 (24%), Positives = 56/134 (41%), Gaps = 5/134 (3%)

Query: 131  IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG 190
                     + L+ ++P+I  GD N+  +  D  NP    N A F++E R         G
Sbjct: 989  WNEQFEKFIKNLDSQKPVIICGDMNVAHKEIDLANPKTNTNSAGFSVEERDGMTAFLGNG 1048

Query: 191  FTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT 249
            + D  R  +      Y+FW Y  ++   N G R+D+ ++S      +    I +   G  
Sbjct: 1049 YVDIYRHLYPEKEKAYTFWIYMRNARPNNVGWRLDYFLVSQRFVDNVCDNIIHSDVMG-- 1106

Query: 250  KPSDHTPVIVSLDI 263
              SDH P+ + + I
Sbjct: 1107 --SDHCPLSLHIQI 1118



 Score = 67.1 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)

Query: 6   VATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFET 49
           + TWNV+ +R+ +       +K + PDI+C+QETK      P E 
Sbjct: 928 ITTWNVDGLRSWLKKGCLDILKYDKPDILCIQETKCAVYKLPEEV 972


>gi|153823973|ref|ZP_01976640.1| exodeoxyribonuclease III [Vibrio cholerae B33]
 gi|126518510|gb|EAZ75733.1| exodeoxyribonuclease III [Vibrio cholerae B33]
          Length = 145

 Score = 98.3 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 37/145 (25%), Positives = 58/145 (40%), Gaps = 7/145 (4%)

Query: 125 DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------HDCYNPIIWENDACFTLE 178
             K  + +  + +  +     E L+  GD NI P               +      F  E
Sbjct: 1   PYKRQFYRDLMTYLREHRSNSERLVVMGDINISPLDLDIGIGEANRKRWLQTGKCSFQPE 60

Query: 179 VRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
            R+  Q L + G  D  R  H      +S++DY +  +  N+G+RID I+ +P       
Sbjct: 61  EREWLQTLLDWGLVDTFRQLHPDVSDQFSWFDYRSRGFEDNRGLRIDVILATPTLAETCQ 120

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLD 262
            A ID + R   KPSDH P+  +  
Sbjct: 121 EAGIDYELRAIDKPSDHAPIWTTFK 145


>gi|167860654|gb|ACA05109.1| exodeoxyribonuclease III [Flammeovirga yaeyamensis]
          Length = 208

 Score = 98.3 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 47/213 (22%), Positives = 87/213 (40%), Gaps = 7/213 (3%)

Query: 50  LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
            + L +           G + ++    +E ++   G +          T     +   + 
Sbjct: 1   FKDLGFKYHYWHSAEKKGYSGVAILSKVEAISTKIGME-IDTYDCEGRTILCEFENFTLI 59

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
           N Y P G      +   K  ++  +  + ++  E  + L+  GD+NI  +  D +NP   
Sbjct: 60  NTYFPSG-TSGEERQKFKYQFLDDYFEYIAKLKENYKNLVVCGDFNICHKAIDIHNPERN 118

Query: 170 ENDACFTL-EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
           +N + F   E     + +   GF DA R   ++   YS+W Y A +  KN G RID+ M+
Sbjct: 119 KNTSGFQPAEREWVSKFINEGGFIDAFRKFDESPGKYSWWTYRAGARKKNLGWRIDYFMV 178

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
             E  + L S+++  +       SDH P+ + L
Sbjct: 179 QKEMENTLISSQLHNEA----VHSDHCPIEIVL 207


>gi|227889347|ref|ZP_04007152.1| exodeoxyribonuclease III [Lactobacillus johnsonii ATCC 33200]
 gi|227850149|gb|EEJ60235.1| exodeoxyribonuclease III [Lactobacillus johnsonii ATCC 33200]
          Length = 179

 Score = 98.3 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 5/134 (3%)

Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG 190
             +  R    +L   +P+I  GD ++  +  D   P    +   FT   R+   +L N G
Sbjct: 47  WAQTFRNYVTKLMQYKPVIIGGDMSVAHERIDLAEPDDNHHRPGFTGIERKEVFELLNAG 106

Query: 191 FTDAIRATHDTHHLYSFWDYYAD-SWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT 249
           F D  R  H     Y++W Y    + ++N G R+D+ ++S      L +A+I +   G  
Sbjct: 107 FIDTFRYFHPDEAKYTYWSYRDKEARAENLGWRLDYFLVSNNLEDKLTNAKILSNIMG-- 164

Query: 250 KPSDHTPVIVSLDI 263
             SDH P+ + +DI
Sbjct: 165 --SDHCPIELDVDI 176


>gi|302823174|ref|XP_002993241.1| hypothetical protein SELMODRAFT_187330 [Selaginella moellendorffii]
 gi|300138911|gb|EFJ05662.1| hypothetical protein SELMODRAFT_187330 [Selaginella moellendorffii]
          Length = 351

 Score = 98.3 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 56/312 (17%), Positives = 103/312 (33%), Gaps = 56/312 (17%)

Query: 5   TVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTEDKNFPFETLQS-------- 52
              +WN NS+  R  N    + ++I+  +PD+IC+QE +     F  E            
Sbjct: 34  RFMSWNANSLLLRFKNNREEVMSFIRGFDPDVICIQEVRLPAAGFKGEKKNPGEIKDDSA 93

Query: 53  ------------------LNYHIETCGQKSYN-GVAILSKYQPIEIVTHLPGDDLDVQAR 93
                              +Y +     ++   G A+  K     +      D+    A+
Sbjct: 94  AARNDKQAVMRVLSVSPMADYSVWWSLGENKYAGTALFVKNCFKPVSVAFNIDNKGKDAQ 153

Query: 94  FIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLE-LEEPLIFAG 152
             E    I         L   +       + ++     + + +   + +    +PLI+ G
Sbjct: 154 RHEIDGRIILAEFGSFTLLNTYAPNNGWKEEENGFVRRRAWDKKVLEFVSSCSKPLIWCG 213

Query: 153 DYNIIPQPHDCYNPIIWENDACFTL----------------EVRQSFQKLQNMGFTDAIR 196
           D N+  Q  D  +P  + N                      E  +    L      D  R
Sbjct: 214 DLNVSHQEIDVTHPEFFANATQPGYTPPNKEDAGQPGFTLNERARFSAILNRGNLVDTYR 273

Query: 197 ATHDTHHLYSFWDYYADSWSKNKG--IRIDHIMLSPEATSLLHSARIDTKPRGWT----K 250
             H+   L + + +  +   K +G  +RID+ ++S      L S++I    RG       
Sbjct: 274 HLHEKQDLEAGFTWSGNPVGKYRGKRMRIDYFLISKALLPRLASSKIH--GRGIELEGFL 331

Query: 251 PSDHTPVIVSLD 262
            SDH P+ + L 
Sbjct: 332 GSDHCPLTMELK 343


>gi|281338530|gb|EFB14114.1| hypothetical protein PANDA_009240 [Ailuropoda melanoleuca]
          Length = 363

 Score = 98.3 bits (243), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 52/282 (18%), Positives = 91/282 (32%), Gaps = 34/282 (12%)

Query: 2   SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           S +++ T NVN + A I    +A WIK ++P I CLQET  E K+     ++        
Sbjct: 5   SYLSIITLNVNGLNAPIKQHRVADWIKRHDPSICCLQETHFEPKDTSRLKVKGWRTIFHA 64

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
              +   GVAIL+  +                 +            + +          I
Sbjct: 65  SRPQKKAGVAILTSDRLDF--------------KLKTIVRDTEGHYIILKGSIQQVDMTI 110

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
            +    ++ +           +  +++  +  GD N      D               E 
Sbjct: 111 INIYAPNRGAARYTSQLLTKIKRHIDKNTVIVGDLNTPLSEIDRTPWQKLSK------ES 164

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           +     L  +   D  R  H     YSF+     ++S     RIDH +      S     
Sbjct: 165 KALNAILDELDLIDIYRTLHPRTKEYSFYSNAHGTFS-----RIDHALGHKTGLSQYQKI 219

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
            I          SDH  + + L+     K  ++S +  ++ I
Sbjct: 220 EIIPCI-----FSDHNALKLELN--HKEKPGRNSNTWRLRTI 254


>gi|87303809|ref|ZP_01086533.1| Exodeoxyribonuclease III xth [Synechococcus sp. WH 5701]
 gi|87281674|gb|EAQ73663.1| Exodeoxyribonuclease III xth [Synechococcus sp. WH 5701]
          Length = 97

 Score = 97.9 bits (242), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 34/87 (39%), Positives = 44/87 (50%), Gaps = 1/87 (1%)

Query: 192 TDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP 251
            D  R        +S+WDY + +W +++G RIDHI L  E   L  S  I    RG  KP
Sbjct: 8   QDVFRVFEPDAGHWSWWDYRSGAWDRDRGWRIDHIYLCDELLGLARSCVIHKSVRGNDKP 67

Query: 252 SDHTPVIVSLDIPEPRKKQQDSTSQNM 278
           SDH PV V LD P P    +D  ++N 
Sbjct: 68  SDHAPVSVDLDWP-PSDDDEDGHNEND 93


>gi|289616636|emb|CBI56586.1| unnamed protein product [Sordaria macrospora]
          Length = 641

 Score = 97.6 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 51/314 (16%), Positives = 90/314 (28%), Gaps = 65/314 (20%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET---C 60
           + + TWN            +       DI+ +QETK + K+   + +    + +      
Sbjct: 3   LRITTWN--GEN---RTFQSMFDTLEVDIVVMQETKIQRKDLRDDMVLVPGWDVYFSLPK 57

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL------- 113
            +K Y+GVAI ++      V    G    +        F       +IG           
Sbjct: 58  YKKGYSGVAIYTRSSKCCPVRAEEGITGVLCPPNSSTKFRDLPADQQIGGYPTPGQLSSD 117

Query: 114 -------------------------PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPL 148
                                            T+ + + ++I          + + + +
Sbjct: 118 VDEAQLDSEGRCVILEFPAFVLIGVYSPATRDETRTEFRQAFIDAMDARVRNLIAMGKEV 177

Query: 149 IFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF----------------- 191
              GD NII    D             TL+   S    + +                   
Sbjct: 178 FLCGDLNIIRNEMDTAGLPERLKKEAMTLDDFISTPSRRFLNQIVFGGRVIGEPDEGREK 237

Query: 192 ---TDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRG 247
               D  R  H     +Y+ W+   ++   N G RID+++ S         A I     G
Sbjct: 238 PVLWDLCREFHPRRPGMYTCWETRKNARPGNYGSRIDYVLCSSGIKDWFVDANIQEGLLG 297

Query: 248 WTKPSDHTPVIVSL 261
               SDH PV  ++
Sbjct: 298 ----SDHCPVYATI 307


>gi|315282770|ref|ZP_07871101.1| exodeoxyribonuclease III [Listeria marthii FSL S4-120]
 gi|313613585|gb|EFR87398.1| exodeoxyribonuclease III [Listeria marthii FSL S4-120]
          Length = 139

 Score = 97.6 bits (241), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 49/121 (40%), Gaps = 2/121 (1%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      + +E + DI CLQETK ++     +     +Y      +
Sbjct: 1   MKLISWNVNGLRAAVKKGFLEYFEEVDADIFCLQETKLQEGQIELDLPAYKDY-WNYAVK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +P+ +   L   + D + R I   F                   +   
Sbjct: 60  KGYSGTAIFTKVEPLSVQYGLGIPEHDTEGRVITLEFKEFFMVTVYTPNSQAELKRLDYR 119

Query: 123 K 123
            
Sbjct: 120 M 120


>gi|169850286|ref|XP_001831840.1| DNA-(apurinic or apyrimidinic site) lyase 2 [Coprinopsis cinerea
           okayama7#130]
 gi|116507128|gb|EAU90023.1| DNA-(apurinic or apyrimidinic site) lyase 2 [Coprinopsis cinerea
           okayama7#130]
          Length = 609

 Score = 97.2 bits (240), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 44/325 (13%), Positives = 80/325 (24%), Gaps = 71/325 (21%)

Query: 4   VTVATWNVNSIRA--------RIHNLAAWIKENNPDIICL-----------QETKTED-- 42
           + + TWN+N +R          +      +     DIIC            QE       
Sbjct: 1   MRLLTWNINGVRTLPQYHPWNTLKTFDDILNHLESDIICFQEMKSGRKLLTQEVAVPPSF 60

Query: 43  KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI- 101
            +F    ++   Y       +S   V + ++     I+   P    + +           
Sbjct: 61  DSFFSFPIKKTGYSGVATYTRSKVAVPLKAEEGLSGILQPKPPLAPEERISNYATYPPNL 120

Query: 102 ----------------------------NTQTLRIGNLYLPHGNPITSTKYDDKISWIKR 133
                                           + I       G      +          
Sbjct: 121 LDDDMHDADDDRLDYKNLDSEGRAIVVDMGLFVLINTYCPNDGTGTEEREAFKMDYHRLL 180

Query: 134 FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT-LEVRQSFQKLQNMGFT 192
             R      + +  +I  GD N      D     +         LE  + F   +   + 
Sbjct: 181 ETRVRGLIEKEKREVIVVGDLNACAAVIDHCEGELMIKKGQAMGLEGEEGFWGKEYRRWI 240

Query: 193 DAI----------------RATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
                              +   D   +Y+ W+    +   N G RID I+++P     +
Sbjct: 241 RDWLVKEDGTGGTLVDITRKLWPDREGMYTCWNTKISARETNYGTRIDFILVTPGLVPWI 300

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSL 261
            ++          K SDH PV    
Sbjct: 301 KASDTLPNI----KGSDHCPVYADF 321


>gi|254993774|ref|ZP_05275964.1| 3'-exo-deoxyribonuclease exoA [Listeria monocytogenes FSL J2-064]
          Length = 150

 Score = 97.2 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 67/156 (42%), Gaps = 8/156 (5%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + +WNVN +RA +      + +E + DI CLQETK ++     +     +Y      +
Sbjct: 1   MKLISWNVNGLRAAVKKGFLEYFEEVDADIFCLQETKLQEGQIELDLPAYKDY-WNYAVK 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K +P+ +   L   + D + R I   F                 +     
Sbjct: 60  KGYSGTAIFTKVEPLSVQYGLGVPEHDTEGRVITLEFEEF-----FMVTVYTPNSQAELK 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP 158
           + D ++++    L +    L+  +P++  GD N+  
Sbjct: 115 RLDYRMTFEDAILEYVK-NLDKTKPVVLCGDLNVAH 149


>gi|34392581|dbj|BAC82623.1| pol-like protein [Ciona intestinalis]
          Length = 1235

 Score = 96.8 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 41/277 (14%), Positives = 89/277 (32%), Gaps = 31/277 (11%)

Query: 4   VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + ++NVN +R  A+   +  ++K    D+I LQET +                +E   
Sbjct: 1   MKIVSFNVNGLRNNAKRKCIFRFLKNKKFDVILLQETHSSLD-------------VEVMW 47

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           ++ +        +                             + L       P    + +
Sbjct: 48  KREWGNAPTFFSHGTTSARGVCILLSPQQNWTVHHTESDTEGRFLIASISAGPKRLTLAN 107

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
               +  + I     F      L+   I  GD+N I       +P     +   + E++ 
Sbjct: 108 VYGPNSDNPIFFDSFFGIINDYLDNDAIIGGDFNAILSNDLDKSPGNKHANGKSSSEIKN 167

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             +        D  R  +     +S      + ++   G RID  ++S   T  + +  I
Sbjct: 168 YMK---EFDLVDIFRELNPRQRRFS--RVQQNPFT---GSRIDFFLVSEGLTPHIKNCDI 219

Query: 242 DTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278
           +   +     SDH  V+++++   P+ K+       +
Sbjct: 220 EPSIK-----SDHRLVVLNIN---PQFKENGPGYWKL 248


>gi|255597554|ref|XP_002536800.1| ap endonuclease, putative [Ricinus communis]
 gi|223518503|gb|EEF25584.1| ap endonuclease, putative [Ricinus communis]
          Length = 130

 Score = 96.8 bits (239), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 30/120 (25%), Positives = 52/120 (43%), Gaps = 5/120 (4%)

Query: 145 EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNM-GFTDAIRATHDTHH 203
              ++  GD+NI  +  D  N    + ++ F  E R    ++ +  G  D  R       
Sbjct: 15  GREIVICGDWNIAHKEIDLKNWKSNQKNSGFLPEERAWMTRIFDELGLVDVHRGIDQRPE 74

Query: 204 LYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            Y++W     +W+KN G RID+ + +P   +  H+  I    R     SDH P+I+   +
Sbjct: 75  QYTWWSNRGQAWAKNVGWRIDYHVATPGIAARAHAVSIYKDER----FSDHAPLIIDYHL 130


>gi|331657785|ref|ZP_08358747.1| exodeoxyribonuclease III (Exonuclease III) (EXO III)
           (APendonuclease VI) [Escherichia coli TA206]
 gi|331056033|gb|EGI28042.1| exodeoxyribonuclease III (Exonuclease III) (EXO III)
           (APendonuclease VI) [Escherichia coli TA206]
          Length = 123

 Score = 96.0 bits (237), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 1/101 (0%)

Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKG 220
           +     +      F  E R+  ++L + G  D  R  +      +S++DY +  +  N+G
Sbjct: 21  ENRKRWLRTGKCSFLPEEREWMERLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRG 80

Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           +RID ++ S           ID + R   KPSDH PV  + 
Sbjct: 81  LRIDLLLASQPLAECCVETGIDYEIRSMEKPSDHAPVWATF 121


>gi|221055699|ref|XP_002258988.1| AP endonuclease (DNA-(apurinic or apyrimidinic site) lyase)
           [Plasmodium knowlesi strain H]
 gi|193809058|emb|CAQ39761.1| AP endonuclease (DNA-(apurinic or apyrimidinic site) lyase),
           putative [Plasmodium knowlesi strain H]
          Length = 516

 Score = 96.0 bits (237), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 52/332 (15%), Positives = 95/332 (28%), Gaps = 76/332 (22%)

Query: 5   TVATWNVNSIRARIHN------LAAWIKENNPDIICLQETKTED---------------- 42
           T+ TWN+NSI  R  N        ++    N D++C QE +                   
Sbjct: 183 TIVTWNMNSITVRYKNKEKWNAFMSFFNRINADVLCFQEVRLPALNLYDAKEAKDGERDR 242

Query: 43  -----------------KNFPFETLQSLN-YHIETCGQKSYNGVAILSKYQPIEIVTHLP 84
                            +    E   + N Y      + S   V +        I  +L 
Sbjct: 243 GKVKNTDQKSQVDFDIMEKILKEDFHNYNAYFSLANIKYSGQLVLVKRSIPIKSIRYNLS 302

Query: 85  GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL 144
            D    +         +      + + Y P+        ++ +  + ++   F S     
Sbjct: 303 FDLDPREHHHEGRVIIVEFSKFYLLSTYTPNNGFEPVK-FERRRLFDEKLKEFVSVLRNK 361

Query: 145 EEPLIFAGDYNIIPQPHD--CYNPIIWENDACFTLEVRQSFQKLQ--------------- 187
           ++ L++ GD NI P+  D                 E                        
Sbjct: 362 KKNLVWTGDLNIAPEDTDLSHPAEFRRMKKGNVPKEFVGQPGCTDFERKNFRGILSAGDL 421

Query: 188 -NMGFTDAIRATHD---------------THHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
            +     A    +                  ++Y++   +    S NK +RIDH ++S +
Sbjct: 422 IDSYRHLANLRANKGEPGKATHNRAVSDINDNIYTWRCPFLMGKSCNKAMRIDHFIVSRD 481

Query: 232 ATSLLHSARID--TKPRGWTKPSDHTPVIVSL 261
               + +  I   +        SDH PVI+ L
Sbjct: 482 FMPNVENVEIHGYSVFHNNFYGSDHCPVILHL 513


>gi|258544338|ref|ZP_05704572.1| exodeoxyribonuclease III [Cardiobacterium hominis ATCC 15826]
 gi|258520418|gb|EEV89277.1| exodeoxyribonuclease III [Cardiobacterium hominis ATCC 15826]
          Length = 157

 Score = 95.6 bits (236), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 42/155 (27%), Positives = 64/155 (41%), Gaps = 2/155 (1%)

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
              +    + + +   +     +   I   +                GD+NI P   D +
Sbjct: 1   MFIVSVSAVNYRHEQKNLPKRYQARAIAASVGDVRVLNLYVPNGKAIGDFNITPADLDVH 60

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRID 224
           +P  W +    +   RQ+   +  +G+ DA R  H     YS+WDY      +N G+RID
Sbjct: 61  DPDAWRDKILCSAPERQALADILALGYRDAYRNLHPDTVQYSWWDYRMGGLRRNIGMRID 120

Query: 225 HIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
             + S      LH A IDT+PR W +PSDH P  V
Sbjct: 121 LTLCSDNLA--LHDAGIDTEPRHWERPSDHAPAWV 153


>gi|237786126|ref|YP_002906831.1| putative exodeoxyribonuclease [Corynebacterium kroppenstedtii DSM
           44385]
 gi|237759038|gb|ACR18288.1| putative exodeoxyribonuclease [Corynebacterium kroppenstedtii DSM
           44385]
          Length = 361

 Score = 95.6 bits (236), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 58/326 (17%), Positives = 94/326 (28%), Gaps = 70/326 (21%)

Query: 2   SVVTVATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           + +TVA+ NVN IRA +            W+K  N D++ LQE +  +K        +L+
Sbjct: 35  ASLTVASINVNGIRAAVKHRSEENLGFHEWLKNANVDVVLLQEVRASEKQAEDALKPALD 94

Query: 55  YHI----ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
           +           +   GV ILS Y   ++   +P  +   +              +R+ +
Sbjct: 95  HGWSLTVAPAASRGRAGVGILSMYPVDDVEIGIPDFEDAGRWIEGTIHAGGGLGDVRLAS 154

Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170
           LYLP G                       QR    + ++ AGD+NI  +  D  +     
Sbjct: 155 LYLPSGGWNEKQDEKYAFLDSLA--PVLEQRAGQYDKMLVAGDWNICHRREDLKSWKGNR 212

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG---------- 220
             A F  + R     +   G    +   +D                 N G          
Sbjct: 213 KKAGFLPDERAFMDSIFGPGPGVTVSEINDATEAPRGVTLSDGRRQGNAGAIGDFFASKD 272

Query: 221 ------------------------------------IR-----------IDHIMLSPEAT 233
                                                R           ID    +    
Sbjct: 273 YQPSAASFRGPAKDPKWVDVQRSFHEDEEGPYSWYTWRGQAFDTGAGWRIDVHAATRSLA 332

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIV 259
               +AR D       + SDH+PV+V
Sbjct: 333 ERAVAARTDVADTYDLRWSDHSPVVV 358


>gi|209521512|ref|ZP_03270215.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. H160]
 gi|209498042|gb|EDZ98194.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. H160]
          Length = 157

 Score = 95.2 bits (235), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 33/81 (40%), Positives = 45/81 (55%)

Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
           +TDA+R       +Y+FWDY+   W  N G+RIDH++LS E    L  A +D   RG   
Sbjct: 76  WTDALRTRFGDERVYTFWDYFRRHWDTNSGLRIDHLLLSAELAPRLRDAGVDRWVRGEPH 135

Query: 251 PSDHTPVIVSLDIPEPRKKQQ 271
            SDH P  + L++   RKKQ 
Sbjct: 136 ASDHAPTWIELEMGAGRKKQS 156



 Score = 92.2 bits (227), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 36/110 (32%), Positives = 54/110 (49%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           M+ + +AT+N+N IR R+  L  W+    PD++CLQE K  D  FP + L+   Y     
Sbjct: 1   MARLRIATFNLNGIRPRLAALLQWLVREAPDVVCLQELKAVDSAFPVDALRDAGYGAVWQ 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
           GQ ++NGVAIL+K    + +    GD+                  LRI +
Sbjct: 61  GQSAWNGVAILAKGAWTDALRTRFGDERVYTFWDYFRRHWDTNSGLRIDH 110


>gi|46200513|gb|AAL73527.2|AF466200_6 putative AP endonuclease [Sorghum bicolor]
          Length = 348

 Score = 94.9 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 53/293 (18%), Positives = 89/293 (30%), Gaps = 44/293 (15%)

Query: 5   TVATWNVNSIRARIH----NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
              TWN NS+  R+       +  +   +PD+IC+Q      +       +         
Sbjct: 50  KFLTWNANSLLLRMKSDWPAFSQLVARLDPDVICVQ---VVLRALSTSPFKDYRVWWSLS 106

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
             K       + K    + V+                        L +      +G    
Sbjct: 107 DSKYAGTAMFIKKKFEPKKVSFNLDRTSSKHETDGRVIIAEFESFLLLNTYAPNNGWKEE 166

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW----------- 169
              +  +  W KR L F       ++PLI+ GD N+  +  D  +P  +           
Sbjct: 167 ENSFQRRRKWDKRMLEFVQHV---DKPLIWCGDLNVSHEEIDVSHPDFFSSAKLNGYTPP 223

Query: 170 ----ENDACFTL-EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD----------- 213
                    FT  E R+    L      DA R  H    +   + +              
Sbjct: 224 NQEDCGQPGFTPAERRRFGNILFQGKLVDAYRHLHKEKDMDGGFSWSGHPIGNEINFSAY 283

Query: 214 -SWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT----KPSDHTPVIVSL 261
            S  + K +RID+ ++S +    + S  +    RG        SDH PV + L
Sbjct: 284 SSRYRGKRMRIDYFLVSEQLKDRIVSCEMH--GRGIELDGFYGSDHCPVTLEL 334


>gi|239792809|dbj|BAH72703.1| ACYPI007473 [Acyrthosiphon pisum]
          Length = 175

 Score = 94.9 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 5/136 (3%)

Query: 129 SWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN 188
                  R   + L+ ++P++  GD N+  +  D  NP      A FT E R +   L  
Sbjct: 44  MKWDEAFRKYLKELDTKKPVVLTGDLNVAHEEIDIANPKTNTKSAGFTKEERDNMSLLLE 103

Query: 189 MGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRG 247
            GF D  R  +      Y+FW Y+ +S +KN G R+D+ + S      +  + I  +  G
Sbjct: 104 QGFVDTFRTLNPEKTGAYTFWTYFHNSRAKNVGWRLDYFITSKRFMDNVCDSTIRNEVLG 163

Query: 248 WTKPSDHTPVIVSLDI 263
               SDH P++  ++I
Sbjct: 164 ----SDHCPIVFYINI 175


>gi|218677975|ref|ZP_03525872.1| exodeoxyribonuclease III Xth [Rhizobium etli CIAT 894]
          Length = 120

 Score = 94.9 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 57/124 (45%), Positives = 76/124 (61%), Gaps = 5/124 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +AT+NVN I  R+  L  W+KE+ PD+ CLQE K++D  FP + ++   Y     GQK
Sbjct: 1   MKIATYNVNGINGRLAILLRWLKEDAPDVACLQELKSDDAGFPLKEIERAGYGAVWHGQK 60

Query: 64  SYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           S+NGVAIL+K   PI     LPGD  D  +R+IEA        + IG LYLP+GNP  ST
Sbjct: 61  SWNGVAILAKGKTPILTRRGLPGDPDDTHSRYIEAVIDG----IVIGCLYLPNGNPFPST 116

Query: 123 KYDD 126
           K+D 
Sbjct: 117 KFDY 120


>gi|68536781|ref|YP_251486.1| putative exodeoxyribonuclease [Corynebacterium jeikeium K411]
 gi|260579135|ref|ZP_05847027.1| exodeoxyribonuclease [Corynebacterium jeikeium ATCC 43734]
 gi|68264380|emb|CAI37868.1| putative exodeoxyribonuclease [Corynebacterium jeikeium K411]
 gi|258602734|gb|EEW16019.1| exodeoxyribonuclease [Corynebacterium jeikeium ATCC 43734]
          Length = 336

 Score = 94.9 bits (234), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 62/334 (18%), Positives = 102/334 (30%), Gaps = 73/334 (21%)

Query: 1   MSVVTVATWNVNSIRARIH-------NLAAWIKENNPDIICLQETKTEDKNFPFET---L 50
           M  +T+AT NVN IRA           +  W+K    D++ +QE + ++K         L
Sbjct: 1   MKSLTIATVNVNGIRAAAKVRHEDNQGILPWLKATPADVVLMQEVRADEKQTRAALEPVL 60

Query: 51  QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPG----DDLDVQARFIEATFTINTQTL 106
              +        K   GVAILS+    ++          ++     R+IEAT       +
Sbjct: 61  DQWHLAQAPAAAKGRAGVAILSRLPLRDVQIGFGDGPGSEEFSDSGRYIEATVDAGDLPV 120

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEE----PLIFAGDYNIIPQPHD 162
           R+ +LYLP G+  T  + +             S+    E+     L+  GD+NI  +  D
Sbjct: 121 RVASLYLPSGSAGTEKQDEKYRFLDSFGEYLQSRADRAEQGGLPELVVGGDWNICHRRED 180

Query: 163 CYNPIIWENDACFTL------------EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDY 210
             N       + F                 ++ Q                    +   DY
Sbjct: 181 LKNWKTNRKKSGFLPDERAFMDSLLGTFPDEATQVADAEDAGRNGNPAGVAGDFFGAVDY 240

Query: 211 YAD--------------------------------SWSKNKG--------IRIDHIMLSP 230
                                              SW   +G         RID  + + 
Sbjct: 241 KPGDLAAARLAAGAAEEPHYFDVMRRVLPDQAGPYSWWTYRGQAFDTDAGWRIDLQVATR 300

Query: 231 EATSLLH---SARIDTKPRGWTKPSDHTPVIVSL 261
                     +  +D       + SDH+PV+V  
Sbjct: 301 GMLDRALTANNVWVDKAAAYDQRWSDHSPVLVEY 334


>gi|281337694|gb|EFB13278.1| hypothetical protein PANDA_006066 [Ailuropoda melanoleuca]
          Length = 357

 Score = 94.5 bits (233), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 51/280 (18%), Positives = 91/280 (32%), Gaps = 34/280 (12%)

Query: 4   VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           +++ + NVN + A I    +A WIK ++P I CLQET  E K+     ++  +      G
Sbjct: 1   LSIISLNVNGLNAPIKRHRVADWIKRHDPSICCLQETHFEPKDAFRLRVRGWSTIFHANG 60

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
            +   GVAIL   +                 +            + +          I +
Sbjct: 61  PQKKAGVAILISDRLDF--------------KLEAIERDTEGHYIILKGSIQQVDMTIIN 106

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
               ++ +           +  +++  +  GD N      D               E + 
Sbjct: 107 IYAPNRGAARYTSQLLTKIKRHIDKNTVIVGDLNTPLSEIDRTPWQKLSK------ESKA 160

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
               L  +   D  R  H     YSF+     ++S     RIDH +      S      I
Sbjct: 161 LNAILDELDLIDIYRTLHPRTKEYSFYSNAHGTFS-----RIDHALGHKTGLSQYQKIEI 215

Query: 242 DTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
                     SDH  + + L+     K  ++S +  ++ I
Sbjct: 216 IPCI-----FSDHNALKLELN--HKEKPGRNSNTWRLRTI 248


>gi|224133800|ref|XP_002321664.1| predicted protein [Populus trichocarpa]
 gi|222868660|gb|EEF05791.1| predicted protein [Populus trichocarpa]
          Length = 366

 Score = 94.1 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 56/319 (17%), Positives = 101/319 (31%), Gaps = 52/319 (16%)

Query: 4   VTVATWNVNSIRARIH----NLAAWIKENNPDIICLQETKTE----------------DK 43
           +   TWN NS+  R+       + ++ + +PD+I +QE +                  D 
Sbjct: 49  LKFITWNANSLLLRVKNNWPGFSKFVSDIDPDVIVIQEVRMPAAGSKGAPKNSGEIKDDT 108

Query: 44  NFPFETLQSL----------NYHIETCGQKSYN-GVAILSKYQPIEIVTHLPGDDLDVQA 92
           N   E  + L          NY++      S   G A+L K     +      D    + 
Sbjct: 109 NSSREEKKILMRALSSSPFGNYNVWWSLADSKYAGTALLVKKCFQPVKVSFALDQTASKH 168

Query: 93  RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG 152
                      +T R+ N Y P+       K   +     + +     +L  ++PLI+ G
Sbjct: 169 EPDGRVILAEFKTFRLLNTYAPNNGWKEEEKSFQRRRKWDKRMLEVVVQLS-DKPLIWCG 227

Query: 153 DYNIIPQPHDCYNPIIW-----ENDACFTLEVRQSFQKL-----------QNMGFTDAIR 196
           D N+  +  D  +P  +             E                   +     DA R
Sbjct: 228 DLNVSHEEIDVSHPEFFSAAKVNGYVPPNKEDCGQPGFTLSERKRFGAILKEGKLIDAYR 287

Query: 197 ATHDTHHLYSFWDYYADSWSKNKG--IRIDHIMLSPEATSLLHSARIDTK--PRGWTKPS 252
             H    +   + +  +   K +G  +RID  ++S +    +    +            S
Sbjct: 288 FLHKERDMERGFSWSGNPIGKYRGKRMRIDFFIVSEKLKDRIIQCEMHGHGIELEGFYGS 347

Query: 253 DHTPVIVSLDIPEPRKKQQ 271
           DH PV + L    P   + 
Sbjct: 348 DHCPVSLELSPASPDSNES 366


>gi|218672299|ref|ZP_03521968.1| exodeoxyribonuclease III protein [Rhizobium etli GR56]
          Length = 79

 Score = 94.1 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/75 (48%), Positives = 51/75 (68%)

Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
           +TDA+R  H    +Y+FW Y+ +S+ ++ G+RIDH++LSP     L SA +  KPRGW  
Sbjct: 1   WTDAVRHLHPNERIYTFWKYWRNSFERDAGLRIDHLLLSPAVAPWLRSASVRRKPRGWEH 60

Query: 251 PSDHTPVIVSLDIPE 265
            SDH PV++ LDIPE
Sbjct: 61  TSDHAPVMIELDIPE 75


>gi|303286135|ref|XP_003062357.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226455874|gb|EEH53176.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 251

 Score = 94.1 bits (232), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 49/238 (20%), Positives = 86/238 (36%), Gaps = 14/238 (5%)

Query: 9   WNVNSIRARIHN----LAAWIKENNPDIICLQETKTEDKNFPFET--LQSLNYHIETCGQ 62
           WNV  +RA +      L A +    PD++CLQE K +D +    T  L++L     T   
Sbjct: 13  WNVAGLRALMEKNPGTLRAIVDAERPDVLCLQEHKLQDVHVSDLTTKLKTLLPEYPTVRF 72

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ--TLRIGNLYLPHGNPIT 120
                    S    + +V  L G+   +     E             +       G  ++
Sbjct: 73  AVSTKKKGYSGVALLGVVEGLGGNGHAIGKHVDEGRLLTMEYETHWLVLAYVPNSGASLS 132

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP--IIWENDACFTLE 178
           S ++       +  +R     L   +P++F GD N+     D YN      +  A  T E
Sbjct: 133 SHRFPYDRVRWEADVRAYLTSLCASKPVVFGGDLNVAHLDADIYNVGAPHVKKSAGTTPE 192

Query: 179 VRQSFQKLQNM----GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
            R +F +L                 D    +++W     +   N+G+R+D+ + S + 
Sbjct: 193 ERAAFGELLATAGTPPGMSDTHFHPDATGWFTYWSQRVGNRPVNRGLRLDYFVASNDI 250


>gi|218264874|ref|ZP_03478549.1| hypothetical protein PRABACTJOHN_04259 [Parabacteroides johnsonii
           DSM 18315]
 gi|218221713|gb|EEC94363.1| hypothetical protein PRABACTJOHN_04259 [Parabacteroides johnsonii
           DSM 18315]
          Length = 297

 Score = 93.7 bits (231), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 48/269 (17%), Positives = 83/269 (30%), Gaps = 14/269 (5%)

Query: 4   VTVATWNV-NSI---RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           + V ++N+ N      +R  N   WIK   PDI+ + E     +    +      +    
Sbjct: 30  LRVISYNIWNGFEHDASRRANFINWIKGQQPDILAMTELVGFTEKDLGQLASEYGHKYYA 89

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA-TFTINTQTLRIGNLYLPHGNP 118
             ++    V I S      +   + G    +           +   +       L     
Sbjct: 90  IVKEEGYPVGITSNEPITVVKKQMEGFWHGMLHVKTHGLDMIVTHLSPHDWKFRLKEAQM 149

Query: 119 ITSTKYDDKISWIKRFLRFASQ-RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
           +TS   D+++        F +    + +     A     + +            D  F  
Sbjct: 150 LTSYIQDNQLDNCMVMGDFNAYSPFDADWVETHAQLIENMQKWDAEQETYRNMRDGRFDY 209

Query: 178 EVRQSF-----QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
            V   F       +  +      R T     LY +   + D+     G R+D+I++SP  
Sbjct: 210 SVLSKFLSIGLTDICRLYVPADKRTTFPAAFLYGW--QHGDTRLHGIGERLDYILVSPSL 267

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
            S    ARI          SDH PV V L
Sbjct: 268 VSRCLDARIHNGI-DTEGISDHYPVSVDL 295


>gi|290969209|ref|ZP_06560734.1| putative exodeoxyribonuclease III [Megasphaera genomosp. type_1
           str. 28L]
 gi|290780715|gb|EFD93318.1| putative exodeoxyribonuclease III [Megasphaera genomosp. type_1
           str. 28L]
          Length = 109

 Score = 93.3 bits (230), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 5/111 (4%)

Query: 156 IIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADS 214
           +  +  D  NP     +A F+   R+    L   GFTD  R  +     +YS+W Y  ++
Sbjct: 1   MAHEEIDLKNPKSNRKNAGFSDAEREKMTALLAAGFTDTWRHFYPQTADVYSWWSYRFNA 60

Query: 215 WSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
              N G RID+ + S + T+ L +A I T   G    SDH PV ++ D P 
Sbjct: 61  RKNNAGWRIDYFITSQDLTNRLQNAFIYTDIMG----SDHCPVGLTWDCPS 107


>gi|159469514|ref|XP_001692908.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158277710|gb|EDP03477.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 264

 Score = 92.9 bits (229), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 36/259 (13%), Positives = 68/259 (26%), Gaps = 57/259 (22%)

Query: 4   VTVATWNVNSIRARIHNL---AAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           + + +WNVN +R  I +      ++     D++C+QE K    +   E   +  +     
Sbjct: 3   LRIVSWNVNGLRRVIAHFGSLDKFLSALEADVLCIQEHKLTRADLKRELALADGWESFFA 62

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
             +     A+  + + +                             +             
Sbjct: 63  FTRGRELRALDGEGRVVITEHGALVLVNVYGPAITSEERAEERGAFK------------- 109

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
                  +++ +         L     L+  GD+NI P   D                  
Sbjct: 110 -------MTFFRALQHRLDGFLAAGRRLVVLGDFNISPAAADRA---------------- 146

Query: 181 QSFQKLQNMGFTDAIRATHDT--HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
                                     Y+ W+  + +   N G RID I+           
Sbjct: 147 --------GATPRTFEPHRPDRLRDAYTCWNTSSGARVNNFGSRIDLILA----ADGTPG 194

Query: 239 ARIDTKPRGWTKPSDHTPV 257
           A I    +G    SDH P+
Sbjct: 195 ADIMVDFQG----SDHAPL 209


>gi|83314890|ref|XP_730557.1| AP endonuclease-related [Plasmodium yoelii yoelii str. 17XNL]
 gi|23490314|gb|EAA22122.1| putative AP endonuclease-related [Plasmodium yoelii yoelii]
          Length = 554

 Score = 92.9 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 49/341 (14%), Positives = 97/341 (28%), Gaps = 88/341 (25%)

Query: 6   VATWNVNSIRARIHN------LAAWIKENNPDIICLQETKTED----------------- 42
           + TWN+NSI  R  N         ++ E N D++C QE +                    
Sbjct: 211 IVTWNMNSITVRYKNREKWKRFIKFVNEINADVLCFQEVRLPALNVPKNGVKNGVKNGVK 270

Query: 43  ---------------------------------KNFPFETLQSLN-YHIETCGQKSYNGV 68
                                            ++      +  N Y      + S   V
Sbjct: 271 NGVKNEVKNEDEERERGLVKNTDQKSMIDYKIVEDILKNDFKEYNSYFSLANIKYSGQLV 330

Query: 69  AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKI 128
            +    +   +  +L  +              +      + + Y P+       K++ + 
Sbjct: 331 LVKKDIKVKSVRYNLLFETDPNIHNDEGRIILLEFSNFYLLSTYSPNNGF-DQIKFNRRK 389

Query: 129 SWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN 188
            + ++   F        + LI+ GD NI P+  D  +PI +       +      Q    
Sbjct: 390 LYDEQMKNFVLFMKNENKNLIWTGDLNIAPEDIDLSHPIEFRKMKKGNVPKEYIGQPGCT 449

Query: 189 MGFTDAIRATHDT----------------------------HHLYSFWDYYADSWSKNKG 220
               +  +                                  ++Y++   +    S N+ 
Sbjct: 450 DAERENFKTILKNGNLVDSYRYFENYKIKNDPTYKKKTNINDNIYTWRCPFLIGKSCNRA 509

Query: 221 IRIDHIMLSPEATSLLHSARID--TKPRGWTKPSDHTPVIV 259
           +RIDH ++S    + + +  I   +        SDH PVI+
Sbjct: 510 MRIDHFIVSKNLLNQIENVEIHGYSVSHTNFYGSDHCPVIL 550


>gi|196017560|ref|XP_002118569.1| hypothetical protein TRIADDRAFT_62597 [Trichoplax adhaerens]
 gi|190578721|gb|EDV18945.1| hypothetical protein TRIADDRAFT_62597 [Trichoplax adhaerens]
          Length = 150

 Score = 92.9 bits (229), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 43/138 (31%), Positives = 62/138 (44%), Gaps = 5/138 (3%)

Query: 127 KISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL 186
                    R   Q L+  +P+I  GD N+     D  NP      A FT E R+ F KL
Sbjct: 17  YRQEWDADFRKYLQGLDRIKPVILCGDLNVSHLEIDLANPKTNTKTAGFTKEEREGFGKL 76

Query: 187 QNMGFTDAIRATHDTHH-LYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKP 245
            + GF D  R  +      YSFW Y +++ SKN G R+D+ + S      +  + I ++ 
Sbjct: 77  LDCGFIDTFRHFYPNKTSAYSFWSYMSNARSKNIGWRLDYFVTSKNLIPNVADSIIRSEI 136

Query: 246 RGWTKPSDHTPVIVSLDI 263
            G    SDH P+ + L I
Sbjct: 137 EG----SDHCPIELLLQI 150


>gi|256080329|ref|XP_002576434.1| ap endonuclease [Schistosoma mansoni]
 gi|238661702|emb|CAZ32671.1| ap endonuclease, putative [Schistosoma mansoni]
          Length = 254

 Score = 92.5 bits (228), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 44/171 (25%), Positives = 70/171 (40%), Gaps = 7/171 (4%)

Query: 5   TVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFET-LQSLNYHIETCGQ 62
            + +WNVN IRA I N    +IK+ N DI C+QETK      P E  + S      +  +
Sbjct: 66  KIVSWNVNGIRAVIKNNGMEYIKKENADIFCIQETKCPLHKIPSEAKVPSYQSFWSSADK 125

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
             Y G A+ SK  PI++   +     D + R I A +        +   Y+P+       
Sbjct: 126 AGYAGTALFSKISPIKVTYGIGKKMHDDEGRVITAEYD----KFYLVTAYVPNSGQ-GLI 180

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
           +   +            ++L+  +P+I  GD N+  +  D   P      A
Sbjct: 181 RLPYREKEWDPDFLEYLRKLDSTKPVIVCGDLNVAHEEIDLARPETNHKTA 231


>gi|168031629|ref|XP_001768323.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162680501|gb|EDQ66937.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 369

 Score = 92.2 bits (227), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 45/307 (14%), Positives = 87/307 (28%), Gaps = 51/307 (16%)

Query: 5   TVATWNVNSIRARIH----NLAAWIKENNPDIICLQETKT-------------------- 40
              +WN NS   R+      + + ++  +PD+I +QE +                     
Sbjct: 41  KFMSWNTNSFLLRLKTNREEVLSLLRRLDPDVIAIQEVRIPSAGRKGEPRNHGELKDDTN 100

Query: 41  ---EDKNF-----PFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQA 92
              EDK           L        +     Y G A+L K+    I      DD     
Sbjct: 101 SAREDKQIMMRALSVSPLSDYGV-WWSLSDSKYGGTALLVKHSCSPISILYSLDDKLKHE 159

Query: 93  RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG 152
                          +      +        +  + +W  R + F  +  +         
Sbjct: 160 ADGRVILAEFHSFRLLNTYVPNNSWKDDDNGFARRRAWDARMIEFLKRPHKKPLIWCGDL 219

Query: 153 DYNIIPQPHDCYNPIIWENDACFTL--------------EVRQSFQKLQNMGFTDAIRAT 198
           + +         +         +T               E ++  + L      D  R  
Sbjct: 220 NVSNEVIDVSHPDFFSNAKLQGYTPPNAEDIGQPGFTLGERQRFAECLSKGDLVDTYRHL 279

Query: 199 HDTHHLYSFWDYYADSWSKNKG--IRIDHIMLSPEATSLLHSARIDTKPRGWTKP--SDH 254
           H      + + +  +   K +G  +RID+ +LS +    L S+ I  +         SDH
Sbjct: 280 HKQQDFDAGFTWSGNPVGKYRGKRMRIDYFLLSRKLLDRLVSSDIHGQGIEQEGFCGSDH 339

Query: 255 TPVIVSL 261
            P+ + +
Sbjct: 340 CPITMEI 346


>gi|225456791|ref|XP_002277389.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|297733638|emb|CBI14885.3| unnamed protein product [Vitis vinifera]
          Length = 357

 Score = 92.2 bits (227), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 52/309 (16%), Positives = 97/309 (31%), Gaps = 52/309 (16%)

Query: 4   VTVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKT------------------- 40
           +   TWN NS   R+ N       ++ + +PD+I +QE +                    
Sbjct: 40  LKFLTWNANSFLIRVKNNWPEFTKFVSDLDPDVIAVQEVRMPAAGSKGAPKNHGELKDDT 99

Query: 41  ----EDKNFPFETLQSL---NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR 93
               E+K      L      NY +      S      L   +  +        D      
Sbjct: 100 SSSREEKKILMHALSRPPFGNYRVWWSLADSKYAGTALFVKKCFQPKKVSFSIDQKASKH 159

Query: 94  FIEATFTI-NTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG 152
             E    +   ++ R+ N Y+P+           +                 ++PLI+ G
Sbjct: 160 EPEGRVILAEFESFRLLNTYVPNNGWKDEET-SFQRRRKWDKRMLEFVVQSSDKPLIWCG 218

Query: 153 DYNIIPQPHDCYNPIIW---ENDACFTL-------------EVRQSFQKLQNMGFTDAIR 196
           D N+  +  D  +P  +   +++                  E R+    L+     DA R
Sbjct: 219 DLNVSHEEIDVSHPEFFSAAKHNGYVPPNKEDCGQPGFTLAERRRFGGILKEGKLVDAYR 278

Query: 197 ATHDTHHLYSFWDYYADSWSKNKG--IRIDHIMLSPEATSLLHSARIDTK--PRGWTKPS 252
             H    +   + +  +   K +G  +RID+ ++       + +  I  +         S
Sbjct: 279 LLHKEKDMEGGFSWSGNPIGKYRGKRMRIDYFIVPEALKDRIVACEIHGQGIELKGFYGS 338

Query: 253 DHTPVIVSL 261
           DH PV + L
Sbjct: 339 DHCPVSLEL 347


>gi|189242136|ref|XP_001815293.1| PREDICTED: similar to ap endonuclease, partial [Tribolium
           castaneum]
          Length = 130

 Score = 92.2 bits (227), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 34/134 (25%), Positives = 58/134 (43%), Gaps = 5/134 (3%)

Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG 190
                    + L+ ++P+I  GD N+  +  D  NP     +A FT+E R         G
Sbjct: 1   WNEQFEKFIKNLDSQKPVIICGDMNVAHKEIDLANPKTNTKNAGFTVEERDGMTAFLGNG 60

Query: 191 FTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT 249
           + D  R  +      Y+FW Y  ++ +KN G R+D+ ++S      +    I +   G  
Sbjct: 61  YVDIYRHLYPEKEKAYTFWTYMGNARAKNVGWRLDYFLVSQRFVDNVCDNIIHSDVLG-- 118

Query: 250 KPSDHTPVIVSLDI 263
             SDH P+ + + I
Sbjct: 119 --SDHCPLSLHIQI 130


>gi|122934884|gb|ABM68185.1| APEX1 [Lagothrix lagotricha]
          Length = 156

 Score = 91.8 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 6/140 (4%)

Query: 126 DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVRQSFQ 184
           +         R   + L   +PL+  GD N+  +  D  NP   + +A FT  E +   +
Sbjct: 21  EYRQRWDEAFRKFLKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGE 80

Query: 185 KLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            LQ +   D+ R  +    + Y+FW Y  ++ SKN G R+D+ +LS      L  ++I +
Sbjct: 81  LLQAVPLADSFRHLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRS 140

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
           K  G    SDH P+ + L +
Sbjct: 141 KALG----SDHCPITLYLAL 156


>gi|122053846|gb|ABM65904.1| APEX1 [Ateles geoffroyi]
          Length = 159

 Score = 91.8 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 6/140 (4%)

Query: 126 DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVRQSFQ 184
           +         R   + L   +PL+  GD N+  +  D  NP   + +A FT  E +   +
Sbjct: 24  EYRQRWDEAFRKFLKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGE 83

Query: 185 KLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            LQ +   D+ R  +    + Y+FW Y  ++ SKN G R+D+ +LS      L  ++I +
Sbjct: 84  LLQAVPLADSFRHLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRS 143

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
           K  G    SDH P+ + L +
Sbjct: 144 KALG----SDHCPITLYLAL 159


>gi|121222076|gb|ABM47607.1| APEX1 [Saguinus labiatus]
          Length = 158

 Score = 91.8 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 6/140 (4%)

Query: 126 DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVRQSFQ 184
           +         R   + L   +PL+  GD N+  +  D  NP   + +A FT  E +   +
Sbjct: 23  EYRQRWDEAFRKFLKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGE 82

Query: 185 KLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            LQ +   D+ R  +    + Y+FW Y  ++ SKN G R+D+ +LS      L  ++I +
Sbjct: 83  LLQAVPLADSFRHLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRS 142

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
           K  G    SDH P+ + L +
Sbjct: 143 KALG----SDHCPITLYLAL 158


>gi|154291711|ref|XP_001546436.1| hypothetical protein BC1G_15146 [Botryotinia fuckeliana B05.10]
 gi|150846646|gb|EDN21839.1| hypothetical protein BC1G_15146 [Botryotinia fuckeliana B05.10]
          Length = 578

 Score = 91.8 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 70/254 (27%), Gaps = 30/254 (11%)

Query: 31  DIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDV 90
           DI  +QETK + K+   + +    + +     K   G + ++ Y    +           
Sbjct: 6   DIFLMQETKIQRKDLRDDMVLVPGWDVYFSLPKYKKGYSGVAIYTRNSVC----APIRAE 61

Query: 91  QARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIF 150
           +      T   +T + R        G   T  +  D               +      I 
Sbjct: 62  EGITGVLTPPNSTTSFRDLPKDQQIGGYPTGAQLQDYFLDAATLDSEGRCVILEFPAFIL 121

Query: 151 AGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ---------------------KLQNM 189
            G Y    +        I   +A  T                               +  
Sbjct: 122 IGVYCPATRDETRDEFRIGFLNALDTRWSNTYQPLLAGYLIISLVGGKVIGDRDEGTEPQ 181

Query: 190 GFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGW 248
              D  R  H     +++ WD   ++   N G RID+++ S +       + I     G 
Sbjct: 182 VMWDISRGFHPTRKGMFTCWDQKMNARPGNFGSRIDYVLCSEDMKDWFQDSNIQEGLMG- 240

Query: 249 TKPSDHTPVIVSLD 262
              SDH PV  +  
Sbjct: 241 ---SDHCPVFATFK 251


>gi|323452214|gb|EGB08089.1| hypothetical protein AURANDRAFT_71687 [Aureococcus anophagefferens]
          Length = 1302

 Score = 91.4 bits (225), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 53/320 (16%), Positives = 97/320 (30%), Gaps = 61/320 (19%)

Query: 2    SVVTVATWNVNSIRARIH---------NLAAWIKENNPDIICLQETKTEDKNFP--FETL 50
              + V + NV  +RA +           LAA +    PD++CL E K +D++     E L
Sbjct: 981  KTLKVVSVNVAGLRAVLDEAKGPEKRDALAALVASEAPDVLCLNEHKLKDEDVDEAKEKL 1040

Query: 51   QSL------------------NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQA 92
             +L                   Y       +    V   ++            DD  V  
Sbjct: 1041 AALLPAYSRAEFTCSGPPGKKGYSGVAMLFRDGGAVPADAEVTRGMPGVDAAADDDIVNH 1100

Query: 93   RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG 152
                 T  +      +       G  +    Y  +     R L      L+   P+   G
Sbjct: 1101 EGRLLTLALPGTLSLVATYVPNSGQDLKRLAYRTEAGGWDRSLAAYVASLKAAGPVAVIG 1160

Query: 153  DYNIIPQPHDCYNPII-------WENDACFTL-----------------EVRQSFQKLQN 188
            D N      D +N             D                      E     + L +
Sbjct: 1161 DLNCCHAAADMHNMHARPNFEELNSGDVAIEDQYAGLSAIKKQAGLTVEERVSFTKLLDD 1220

Query: 189  MGFTDAIRATHDT-HHLYSFWDYYADS-WSKNKGIRIDHIMLSPEA-----TSLLHSARI 241
             G  D+ R  H     +++++     +    N+G+R+D+++ +P+         L  + +
Sbjct: 1221 AGLVDSFRRQHPAATGVFTYYSQRVVANRPANRGLRLDYVLATPDLLEDGAAPALVDSFV 1280

Query: 242  DTKPRGWTKPSDHTPVIVSL 261
             +      + +DHTPV  + 
Sbjct: 1281 LSDA-DTPQLADHTPVGATF 1299


>gi|217978346|ref|YP_002362493.1| Exonuclease III-like protein [Methylocella silvestris BL2]
 gi|217503722|gb|ACK51131.1| Exonuclease III-like protein [Methylocella silvestris BL2]
          Length = 126

 Score = 91.0 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 19/56 (33%), Positives = 35/56 (62%)

Query: 4  VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
          + +A++N+N++  R+ NL +W+    PD++CLQE K ED+ FP   +++  Y    
Sbjct: 1  MKIASFNINNVNKRLPNLLSWLAAERPDVVCLQELKAEDQAFPLAAIEAAGYRAVW 56


>gi|553182|gb|AAA58373.1| class II AP endonuclease [Homo sapiens]
          Length = 146

 Score = 91.0 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 5/86 (5%)

Query: 2   SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN----YH 56
           + + + +WNV+ +RA I      W+KE  PDI+CLQETK  +   P E  +       Y 
Sbjct: 60  ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQYW 119

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTH 82
                ++ Y+GV +LS+  P+++   
Sbjct: 120 SAPSDKEGYSGVGLLSRQCPLKVSYG 145


>gi|70954382|ref|XP_746240.1| AP endonuclease (DNA-(apurinic or apyrimidinic site) lyase)
           [Plasmodium chabaudi chabaudi]
 gi|56526785|emb|CAH87963.1| AP endonuclease (DNA-(apurinic or apyrimidinic site) lyase),
           putative [Plasmodium chabaudi chabaudi]
          Length = 350

 Score = 91.0 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 52/340 (15%), Positives = 95/340 (27%), Gaps = 87/340 (25%)

Query: 6   VATWNVNSIRARIHN------LAAWIKENNPDIICLQETKTEDKNFPF------------ 47
           + TWN+NSI  R  N         ++ E N D++C QE +    N P             
Sbjct: 8   IVTWNMNSITVRYKNKDKWKKFIKFVNEINADVLCFQEVRLPALNIPKNEEVKVEDNKTY 67

Query: 48  -------------------------------------ETLQSLN-YHIETCGQKSYNGVA 69
                                                +  +  N Y      + S   V 
Sbjct: 68  GRKKTEKIIDEERDRGSVKNTDQKSLLDYNIVEDILKKDFKEYNAYFSLANIKYSGQLVL 127

Query: 70  ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKIS 129
           +    +   +  +L  D              +      + + Y P+     + K++ +  
Sbjct: 128 VKKTIEVKSVRYNLSFDTNPNIHNDEGRIILLEFSNFYLLSTYSPNNGF-DAPKFERRRL 186

Query: 130 WIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNM 189
           +      F     +  + LI+ GD NI P+  D  +PI +       +      Q     
Sbjct: 187 FDDSMKEFVLFMKKENKNLIWTGDLNIAPEDIDLSHPIEFRKMKKGNVPKEYIGQPGCTD 246

Query: 190 GFTDAIRATHDTHH----------------------------LYSFWDYYADSWSKNKGI 221
                 +                                   +Y++   +    S N+ +
Sbjct: 247 AERKNFKTILKNGDLVDSYRYFENYKIKNDPTYKKKTNINDNIYTWRCPFLIGKSCNRAM 306

Query: 222 RIDHIMLSPEATSLLHSARID--TKPRGWTKPSDHTPVIV 259
           RIDH ++S      + +  I   +        SDH PVI+
Sbjct: 307 RIDHFIVSKSLLDKIENVEIHGYSVSHTNFYGSDHCPVIL 346


>gi|296880619|ref|ZP_06904577.1| exodeoxyribonuclease III [Clostridium difficile NAP07]
 gi|296428381|gb|EFH14270.1| exodeoxyribonuclease III [Clostridium difficile NAP07]
          Length = 69

 Score = 91.0 bits (224), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 2/70 (2%)

Query: 4  VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
          +   +WNVN IRA        + KE + D+ CLQETK ++     + L     +     +
Sbjct: 1  MRFISWNVNGIRACAGKGFLDFFKEVDADVFCLQETKLQEGQIELD-LPGYFQYWNYAER 59

Query: 63 KSYNGVAILS 72
          K Y+G AI +
Sbjct: 60 KGYSGTAIFT 69


>gi|154492028|ref|ZP_02031654.1| hypothetical protein PARMER_01659 [Parabacteroides merdae ATCC
           43184]
 gi|154088269|gb|EDN87314.1| hypothetical protein PARMER_01659 [Parabacteroides merdae ATCC
           43184]
          Length = 299

 Score = 90.6 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/267 (14%), Positives = 74/267 (27%), Gaps = 10/267 (3%)

Query: 4   VTVATWNV-NSI---RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           + V ++N+ N      +R  N   WIK   PDI+ + E     +    +      +    
Sbjct: 30  LRVISYNIWNGFEHDASRRANFIDWIKGQQPDILAITELVGFTEKNLGQLASEYGHKYYA 89

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQA-RFIEATFTINTQTLRIGNLYLPHGNP 118
             ++    V I S      +   +      +   +       +   +       L     
Sbjct: 90  IVKEEGYPVGITSNKPITVVKKQVEDFWHGMLHVKTYGLDIIVTHLSPHDWKFRLKEAQM 149

Query: 119 ITSTKYDDKISWIKRFLRFASQ-RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
           +T    D+++        F +    + +     A       +            D     
Sbjct: 150 LTKYIQDNQLDNCMVMGDFNAYSPFDADWVETHAQLIKNKQKWDAEQETYRNMRDGRLDY 209

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYY---ADSWSKNKGIRIDHIMLSPEATS 234
            V   F  +                   + + Y     D+       R+D+I++SP   S
Sbjct: 210 SVLSQFLSIGLTDICRLYVPADKRTTFPTAFLYRWQHGDTRLHGISERLDYILVSPSLVS 269

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261
               A I          SDH PV V L
Sbjct: 270 RCVDAHIHNGI-ETEGISDHYPVSVDL 295


>gi|91786127|ref|YP_547079.1| exodeoxyribonuclease III (xth) [Polaromonas sp. JS666]
 gi|91695352|gb|ABE42181.1| exodeoxyribonuclease III (xth) [Polaromonas sp. JS666]
          Length = 349

 Score = 90.6 bits (223), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 4/61 (6%)

Query: 204 LYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            Y++W     +++KN G R+D+ + +P   +L  S  I    R     SDH P+ V  D 
Sbjct: 292 AYTWWSNRGQAYAKNVGWRLDYHLATPAFAALARSEHIYRAER----FSDHAPITVDYDW 347

Query: 264 P 264
            
Sbjct: 348 S 348



 Score = 88.3 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 46/190 (24%), Positives = 77/190 (40%), Gaps = 9/190 (4%)

Query: 1   MSVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFP--FETLQSLNYHI 57
           MS+  + + N+N IR+     L  WI ++ PD IC+QE K +  +    FE L  L  + 
Sbjct: 1   MSLFKLTSLNLNGIRSATSKGLEDWIAQSLPDCICVQELKAQATDVSGRFEALAGLKGYF 60

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT----QTLRIGNLYL 113
               +K Y+GVA+ ++++P +++      + D + R++E  F          L I + Y 
Sbjct: 61  HFAEKKGYSGVAVYTRHEPSDVIVGYGSSEFDAEGRYVELRFDRPGRKHAPKLSIISCYF 120

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
           P G+                        L+     +  GD NI  Q  D  N      ++
Sbjct: 121 PSGSSGEER--QAAKFRFLAEFYPRLLALKETRDFVLCGDVNIAHQEIDLKNFKGNRKNS 178

Query: 174 CFTLEVRQSF 183
            F  E R   
Sbjct: 179 GFLPEERAWM 188


>gi|218507710|ref|ZP_03505588.1| exodeoxyribonuclease III protein [Rhizobium etli Brasil 5]
          Length = 66

 Score = 90.2 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 30/66 (45%), Positives = 43/66 (65%)

Query: 4  VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
          + +AT+NVN I  R+  L  W+KE+ PD++CLQE KT+D  FP +  +   Y     GQ+
Sbjct: 1  MKIATYNVNGINGRLDILLRWLKEDAPDVVCLQELKTDDAKFPRKETERAGYGAVWHGQR 60

Query: 64 SYNGVA 69
          S+NGVA
Sbjct: 61 SWNGVA 66


>gi|58271540|ref|XP_572926.1| DNA-(apurinic or apyrimidinic site) lyase [Cryptococcus neoformans
           var. neoformans JEC21]
 gi|134115276|ref|XP_773936.1| hypothetical protein CNBH3880 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50256564|gb|EAL19289.1| hypothetical protein CNBH3880 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57229185|gb|AAW45619.1| DNA-(apurinic or apyrimidinic site) lyase, putative [Cryptococcus
           neoformans var. neoformans JEC21]
          Length = 654

 Score = 90.2 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 46/290 (15%), Positives = 73/290 (25%), Gaps = 50/290 (17%)

Query: 18  IHNLAAWIKENNPDIICLQETKTEDKNFPFETL---QSLNYHIETCGQKSYNGVAIL--- 71
             N+   + E +  I C QE KT                 +      +  Y+GV      
Sbjct: 31  KKNIEGLLDELDAQIFCFQEHKTVRTRLEKSMACPGPYDGFWTFPRSKTGYSGVCTYVDS 90

Query: 72  ---------------------SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR--- 107
                                S  +P        G   DV               ++   
Sbjct: 91  RYCVPLKAEEGITGLLLGDRLSTMKPPWTDAERIGSYPDVNDMEWMDELDGTKFDVKKLD 150

Query: 108 ------------IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYN 155
                            L   N   S +   K++++                ++  GD N
Sbjct: 151 MEGRAVVCDFGLFVLFNLYCPNETNSARRPYKMNYLHALQERVQLLQAAGREVMLVGDIN 210

Query: 156 I--IPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA--THDTHHLYSFWDYY 211
           I   P                     R         G    +          +++ W+  
Sbjct: 211 IVRQPMDSGEGPVRSSAEQHYSHPARRILDDWCAPKGPMIDVVRESWPQRDDMFTCWNQK 270

Query: 212 ADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
            D+ S N G RID+++ +P     +    I  K  G    SDH PV V L
Sbjct: 271 LDARSANYGSRIDYVLCTPGLRPWIKGGDILPKVYG----SDHCPVYVDL 316


>gi|281349439|gb|EFB25023.1| hypothetical protein PANDA_005392 [Ailuropoda melanoleuca]
          Length = 365

 Score = 90.2 bits (222), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 50/282 (17%), Positives = 92/282 (32%), Gaps = 34/282 (12%)

Query: 2   SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           S +++ + N+N + + I    +A WIK ++P I CLQET  E K+     ++  +     
Sbjct: 7   SYLSIISINLNGLNSPIKRHRVADWIKRHDPSICCLQETHFEPKDAFRLRVRGWSTIFHA 66

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            G +   GVAIL   +                 +            + +          I
Sbjct: 67  NGPQKKAGVAILISDRLDF--------------KLEAIERDTEGHYIILKGSIQQVDMTI 112

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
            +    ++ +           +  +++  +  GD N      D               E 
Sbjct: 113 INIYAPNRGAARYTSQLLTKIKRHIDKNTVIVGDLNTPLSEIDRTPWQKLSK------ES 166

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           +     L  +   D  R  H     YSF+     ++S     RIDH +      S     
Sbjct: 167 KALNAILDELDLIDIYRTLHPRTKEYSFYSNAHGTFS-----RIDHALGHKTGLSQYQKI 221

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
            I          SDH  + + L+     K  ++S +  ++ I
Sbjct: 222 EIIPCI-----FSDHNALKLELN--HKEKPGRNSNTWRLRTI 256


>gi|310794037|gb|EFQ29498.1| endonuclease/Exonuclease/phosphatase [Glomerella graminicola
           M1.001]
          Length = 635

 Score = 89.8 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 49/322 (15%), Positives = 94/322 (29%), Gaps = 79/322 (24%)

Query: 4   VTVATWNVNSIRARIHNLAAWI--------KENNPDIICLQETKTEDKNFPFETLQSLNY 55
           + + TWN             W+        +    DI+ +QETK + K+   + +    +
Sbjct: 3   LRITTWN-----------GEWLQYTSEAMFEILEADIVIMQETKIQRKDLRDDMVLVPGW 51

Query: 56  HIET---CGQKSYNGVAILSKYQPIEIVT---------------------------HLPG 85
            +       +K Y+GVAI ++      +                                
Sbjct: 52  DVFFSLPKHKKGYSGVAIYTRNAKCCPIRAEEGITGILPAPNSSTSFRDLPEAQQIGGYP 111

Query: 86  DDLDVQARFIEATFTINTQTLRIGNLYLPHGN-----PITSTKYDDKISWIKRFLRFASQ 140
               +     EAT     + + +                 S++ D ++ ++         
Sbjct: 112 RPDQLPGEVDEATLDSEGRCVVLEFQAFVLIGTYSPAMRDSSRDDFRLGYLNALDARVRN 171

Query: 141 RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF--------- 191
            +   + ++  GD N+I +  D  N          ++E        +             
Sbjct: 172 LVAAGKQVVLTGDLNVIREEMDTCNVREALRKEGMSVEEWMGMPSRRLFNHLVFDGRVTG 231

Query: 192 -----------TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
                       D  R  H T   +++ W+   +    N G RID+I+ S         +
Sbjct: 232 ERDEGREAPVLYDLTRIFHPTRLGMFTCWETKRNMRPANNGSRIDYILCSAGIKDWFTGS 291

Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261
            I     G    SDH PV  +L
Sbjct: 292 DIQEGLMG----SDHCPVYANL 309


>gi|218677944|ref|ZP_03525841.1| putative exodeoxyribonuclease [Rhizobium etli CIAT 894]
          Length = 73

 Score = 89.8 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 29/68 (42%), Positives = 42/68 (61%)

Query: 198 THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257
            H    +Y+FW Y+ +S+ ++ G+RIDH +LSP     L SA +  KPR W   SDH PV
Sbjct: 1   MHPGERVYTFWKYWRNSFERDAGLRIDHFLLSPAVEPWLRSATVRRKPRTWEHTSDHAPV 60

Query: 258 IVSLDIPE 265
           ++ LD+ E
Sbjct: 61  MIELDVSE 68


>gi|330982163|gb|EGH80266.1| exonuclease III [Pseudomonas syringae pv. aptata str. DSM 50252]
          Length = 114

 Score = 89.8 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 3/103 (2%)

Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSK--N 218
           D     +      F  E R+  ++L+N G  D+ R  +     L+S++DY +  +     
Sbjct: 11  DNAKRWLKTGKCSFLPEEREWMERLKNWGLVDSFRHLYPEVVDLFSWFDYRSRGFEDEPK 70

Query: 219 KGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           +G+RID IM S      +  A +D   R   KPSDH P+ + L
Sbjct: 71  RGLRIDLIMTSTGLQPRIKEAGVDYDLRAMEKPSDHAPIWLEL 113


>gi|281349888|gb|EFB25472.1| hypothetical protein PANDA_006397 [Ailuropoda melanoleuca]
          Length = 363

 Score = 89.8 bits (221), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 50/282 (17%), Positives = 92/282 (32%), Gaps = 34/282 (12%)

Query: 2   SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           S +++ + N+N + + I    +A WIK ++P I CLQET  E K+     ++  +     
Sbjct: 5   SYLSIISINLNGLNSPIKRHRVADWIKRHDPSICCLQETHFEPKDAFRLRVRGWSTIFHA 64

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            G +   GVAIL   +                 +            + +          I
Sbjct: 65  NGPQKKAGVAILISDRLDF--------------KLEAIERDTEGHYIILKGSIQQVDMTI 110

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
            +    ++ +           +  +++  +  GD N      D               E 
Sbjct: 111 INIYAPNRGAARYTSQLLTKIKRHIDKNTVIVGDLNTPLSEIDRTPWQKLSK------ES 164

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           +     L  +   D  R  H     YSF+     ++S     RIDH +      S     
Sbjct: 165 KALNAILDELDLIDIYRTLHPRTKEYSFYSNAHGTFS-----RIDHALGHKTGLSQYQKI 219

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
            I          SDH  + + L+     K  ++S +  ++ I
Sbjct: 220 EIIPCI-----FSDHNALKLELN--HKEKPGRNSNTWRLRTI 254


>gi|68063675|ref|XP_673834.1| AP endonuclease (DNA-(apurinic or apyrimidinic site) lyase)
           [Plasmodium berghei strain ANKA]
 gi|68070845|ref|XP_677336.1| hypothetical protein [Plasmodium berghei strain ANKA]
 gi|56491972|emb|CAI02361.1| AP endonuclease (DNA-(apurinic or apyrimidinic site) lyase),
           putative [Plasmodium berghei]
 gi|56497413|emb|CAH98029.1| hypothetical protein PB000718.02.0 [Plasmodium berghei]
          Length = 346

 Score = 89.5 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 49/336 (14%), Positives = 92/336 (27%), Gaps = 83/336 (24%)

Query: 6   VATWNVNSIRARIHN------LAAWIKENNPDIICLQETKTED----------------- 42
           + TWN+NSI  R  N         ++ E N D++C QE +                    
Sbjct: 8   IVTWNMNSITVRYKNKEKWKRFMKFVNEINADVLCFQEVRLPALNISKNESKNVNNKVYG 67

Query: 43  ----------------------------KNFPFETLQSL-NYHIETCGQKSYNGVAILSK 73
                                       +       +    Y      + S   V +   
Sbjct: 68  GKKNEGEERNRGSVKNTDQKSLIDYKIVEEILKNDFKEYNGYFSLANIKYSGQLVLVKKS 127

Query: 74  YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKR 133
            +   +  +L  +              +      + + Y P+      TK+  +  +  +
Sbjct: 128 IKVKSVRYNLLFETDPNIHNDEGRIILLEFSNFYLLSTYSPNNGF-DQTKFKRRSLFDNQ 186

Query: 134 FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTD 193
              F        + LI+ GD NI P+  D  +PI +       +      Q         
Sbjct: 187 MKEFVLFMKNENKNLIWTGDLNIAPEDVDLSHPIEFRKMKKGNVPKEYIGQPGCTDAERA 246

Query: 194 AIRATHDTHH----------------------------LYSFWDYYADSWSKNKGIRIDH 225
             +                                   +Y++   +    S N+ +RIDH
Sbjct: 247 NFKTILKNGDLIDSYRYFENYKIKNDPTYKRKTNINDNIYTWRCPFLIGKSCNRAMRIDH 306

Query: 226 IMLSPEATSLLHSARID--TKPRGWTKPSDHTPVIV 259
            ++S    + + +  I   +        SDH PVI+
Sbjct: 307 FIVSKNLLNQIENIEIHGYSVFHTNFYGSDHCPVIL 342


>gi|281339430|gb|EFB15014.1| hypothetical protein PANDA_009103 [Ailuropoda melanoleuca]
 gi|281343639|gb|EFB19223.1| hypothetical protein PANDA_010445 [Ailuropoda melanoleuca]
 gi|281345510|gb|EFB21094.1| hypothetical protein PANDA_020869 [Ailuropoda melanoleuca]
 gi|281345784|gb|EFB21368.1| hypothetical protein PANDA_017605 [Ailuropoda melanoleuca]
 gi|281348177|gb|EFB23761.1| hypothetical protein PANDA_019415 [Ailuropoda melanoleuca]
 gi|281354576|gb|EFB30160.1| hypothetical protein PANDA_018241 [Ailuropoda melanoleuca]
          Length = 359

 Score = 89.5 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 50/282 (17%), Positives = 92/282 (32%), Gaps = 34/282 (12%)

Query: 2   SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           S +++ + N+N + + I    +A WIK ++P I CLQET  E K+     ++  +     
Sbjct: 1   SYLSIISINLNGLNSPIKRHRVADWIKRHDPSICCLQETHFEPKDAFRLRVRGWSTIFHA 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            G +   GVAIL   +                 +            + +          I
Sbjct: 61  NGPQKKAGVAILISDRLDF--------------KLEAIERDTEGHYIILKGSIQQVDMTI 106

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
            +    ++ +           +  +++  +  GD N      D               E 
Sbjct: 107 INIYAPNRGAARYTSQLLTKIKRHIDKNTVIVGDLNTPLSEIDRTPWQKLSK------ES 160

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           +     L  +   D  R  H     YSF+     ++S     RIDH +      S     
Sbjct: 161 KALNAILDELDLIDIYRTLHPRTKEYSFYSNAHGTFS-----RIDHALGHKTGLSQYQKI 215

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
            I          SDH  + + L+     K  ++S +  ++ I
Sbjct: 216 EIIPCI-----FSDHNALKLELN--HKEKPGRNSNTWRLRTI 250


>gi|281346330|gb|EFB21914.1| hypothetical protein PANDA_012384 [Ailuropoda melanoleuca]
          Length = 359

 Score = 89.5 bits (220), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 50/282 (17%), Positives = 92/282 (32%), Gaps = 34/282 (12%)

Query: 2   SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           S +++ + N+N + + I    +A WIK ++P I CLQET  E K+     ++  +     
Sbjct: 1   SYLSIISINLNGLNSPIKRHRVADWIKRHDPSICCLQETHFEPKDAFRLRVRGWSTIFHA 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            G +   GVAIL   +                 +            + +          I
Sbjct: 61  NGPQKKAGVAILISDRLDF--------------KLEAIERDTEGHYIILKGSIQQVDMTI 106

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
            +    ++ +           +  +++  +  GD N      D               E 
Sbjct: 107 INIYAPNRGAARYTSQLLTKIKRHIDKNTVIVGDLNTPLSEIDRTPWQKLSK------ES 160

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           +     L  +   D  R  H     YSF+     ++S     RIDH +      S     
Sbjct: 161 KALNAILDELDLIDIYRTLHPRTKEYSFYSNAHGTFS-----RIDHALGHKTGLSQYQKI 215

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
            I          SDH  + + L+     K  ++S +  ++ I
Sbjct: 216 EIIPCI-----FSDHNALKLELN--HKEKPGRNSNTWRLRTI 250


>gi|302830584|ref|XP_002946858.1| hypothetical protein VOLCADRAFT_56112 [Volvox carteri f.
           nagariensis]
 gi|300267902|gb|EFJ52084.1| hypothetical protein VOLCADRAFT_56112 [Volvox carteri f.
           nagariensis]
          Length = 355

 Score = 89.1 bits (219), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 45/258 (17%), Positives = 96/258 (37%), Gaps = 26/258 (10%)

Query: 3   VVTVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTE-------DKNFPFETLQ 51
           ++ + +WNV  +RA +      + + +      ++CLQE K +       +     +   
Sbjct: 12  LLNILSWNVAGLRALVKKHPGLIPSLVWREGARVLCLQEHKLQGSHTGEMEAALGLQAGH 71

Query: 52  SLNY--HIETCGQKSYNGVAILSKYQPIEIVTH----LPGDDLDVQARFIEATFTINTQT 105
                  + + G+  Y+GV++ +  +P+ +                    ++   +  + 
Sbjct: 72  DRGRAGWVCSTGKLGYSGVSVHTASRPLSVTVGLGAGGGSTSSPDSDPDPDSEHEVEGRV 131

Query: 106 LRIG-------NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP 158
           + +        N+Y+P+              W   F ++        +P+I  GD N   
Sbjct: 132 VTVELEEAFVVNVYVPNSGEGLKRLDYRINRWDGAFAKYVKGLESRGKPVIVTGDLNCAH 191

Query: 159 QPHDCYNPIIWENDACFTLEVRQSFQKL--QNMGFTDAIRATHDTHHLYSFWDYYADSWS 216
           +  D + P      A FT+E R+SF +L    +G  D  R        Y+++    +   
Sbjct: 192 KEIDIHAPKTNLRSAGFTVEERESFGRLLLGEVGLVDTFRELFPCTVAYTYFTRRFNCRE 251

Query: 217 KNKGIRIDHIMLSPEATS 234
           +NKG R+D+ + S     
Sbjct: 252 QNKGWRLDYFLTSRALMP 269


>gi|281347251|gb|EFB22835.1| hypothetical protein PANDA_019649 [Ailuropoda melanoleuca]
          Length = 340

 Score = 88.7 bits (218), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 50/282 (17%), Positives = 92/282 (32%), Gaps = 34/282 (12%)

Query: 2   SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           S +++ + N+N + + I    +A WIK ++P I CLQET  E K+     ++  +     
Sbjct: 1   SYLSIISINLNGLNSPIKRHRVADWIKRHDPSICCLQETHFEPKDAFRLRVRGWSTIFHA 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            G +   GVAIL   +                 +            + +          I
Sbjct: 61  NGPQKKAGVAILISDRLDF--------------KLEAIERDTEGHYIILKGSIQQVDMTI 106

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
            +    ++ +           +  +++  +  GD N      D               E 
Sbjct: 107 INIYAPNRGAARYTSQLLTKIKRHIDKNTVIVGDLNTPLSEIDRTPWQKLSK------ES 160

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           +     L  +   D  R  H     YSF+     ++S     RIDH +      S     
Sbjct: 161 KALNAILDELDLIDIYRTLHPRTKEYSFYSNAHGTFS-----RIDHALGHKTGLSQYQKI 215

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
            I          SDH  + + L+     K  ++S +  ++ I
Sbjct: 216 EIIPCI-----FSDHNALKLELN--HKEKPGRNSNTWRLRTI 250


>gi|281346276|gb|EFB21860.1| hypothetical protein PANDA_020863 [Ailuropoda melanoleuca]
          Length = 363

 Score = 88.7 bits (218), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 52/282 (18%), Positives = 91/282 (32%), Gaps = 34/282 (12%)

Query: 2   SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           S +++ T N N + A I    +A WIK ++P I CLQET  E K+     ++  +     
Sbjct: 5   SYLSIITLNGNGLNAPIKRHRVADWIKRHDPSICCLQETHFEPKDAFRLRVRGWSTIFHA 64

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            G +   GVAIL   +                 +            + +          I
Sbjct: 65  NGPQKKAGVAILISDRLDF--------------KLEAIERDTEGHYIILKGSIQQVDMTI 110

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
            +    ++ +           +  +++  +  GD N      D               E 
Sbjct: 111 INIYAPNRGAARYTSQLLTKIKRHIDKNTVIVGDLNTPLSEIDRTPWQKLSK------ES 164

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           +     L  +   D  R  H     YSF+     ++S     RIDH +      S     
Sbjct: 165 KALNAILDELDLIDIYRTLHPRTKEYSFYSNAHGTFS-----RIDHALGHKTGLSQYQKI 219

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
            I          SDH  + + L+     K  ++S +  ++ I
Sbjct: 220 EIIPCI-----FSDHNALKLELN--HKEKPGRNSNTWRLRTI 254


>gi|321262100|ref|XP_003195769.1| DNA-(apurinic or apyrimidinic site) lyase [Cryptococcus gattii
           WM276]
 gi|317462243|gb|ADV23982.1| DNA-(apurinic or apyrimidinic site) lyase, putative [Cryptococcus
           gattii WM276]
          Length = 651

 Score = 88.7 bits (218), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 45/290 (15%), Positives = 72/290 (24%), Gaps = 50/290 (17%)

Query: 18  IHNLAAWIKENNPDIICLQETKTEDKNFPFETL---QSLNYHIETCGQKSYNGVAIL--- 71
             N+   + E +  IIC QE KT                 +      +  Y+GV      
Sbjct: 3   KKNIEGLLDELDAQIICFQEHKTVRTRLEKSMACPGPYDGFWTFPRSKTGYSGVCTYVDS 62

Query: 72  ---------------------SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR--- 107
                                S  +P        G    V               ++   
Sbjct: 63  RYCVPLKAEEGITGLLLGDRLSTMKPPWTDVERIGSYPVVDDMDWMDELDGTKFDVKKLD 122

Query: 108 ------------IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYN 155
                            L   N     +   K++++                +I  GD N
Sbjct: 123 MEGRAVVCDFGLFVLFNLYCPNETNDARRPYKMNYLHALQERVHLLQAAGREVIIVGDIN 182

Query: 156 I--IPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA--THDTHHLYSFWDYY 211
           I   P                     R         G    +          +++ W+  
Sbjct: 183 IVRQPMDSGEGPVRSSAEQHYSHPARRILDNWCAPKGPMVDVIRESWPQRDDMFTCWNQK 242

Query: 212 ADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
            D+ S N G RID+++ +      +    I +K  G    SDH PV V L
Sbjct: 243 LDARSANYGSRIDYVLCTHGLRPWIKGGDILSKVYG----SDHCPVYVDL 288


>gi|281340347|gb|EFB15931.1| hypothetical protein PANDA_015345 [Ailuropoda melanoleuca]
          Length = 340

 Score = 88.7 bits (218), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 50/282 (17%), Positives = 92/282 (32%), Gaps = 34/282 (12%)

Query: 2   SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           S +++ + N+N + + I    +A WIK ++P I CLQET  E K+     ++  +     
Sbjct: 1   SYLSIISINLNGLNSPIKRHRVADWIKRHDPSICCLQETHFEPKDAFRLRVRGWSTIFHA 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            G +   GVAIL   +                 +            + +          I
Sbjct: 61  NGPQKKAGVAILISDRLDF--------------KLEAIERDTEGHYIILKGSIQQVDMTI 106

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
            +    ++ +           +  +++  +  GD N      D               E 
Sbjct: 107 INIYAPNRGAARYTSQLLTKIKRHIDKNTVIVGDLNTPLSEIDRTPWQKLSK------ES 160

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           +     L  +   D  R  H     YSF+     ++S     RIDH +      S     
Sbjct: 161 KALNAILDELDLIDIYRTLHPRTKEYSFYSNAHGTFS-----RIDHALGHKTGLSQYQKI 215

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
            I          SDH  + + L+     K  ++S +  ++ I
Sbjct: 216 EIIPCI-----FSDHNALKLELN--HKEKPGRNSNTWRLRTI 250


>gi|281340587|gb|EFB16171.1| hypothetical protein PANDA_021425 [Ailuropoda melanoleuca]
          Length = 348

 Score = 88.7 bits (218), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 50/282 (17%), Positives = 92/282 (32%), Gaps = 34/282 (12%)

Query: 2   SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           S +++ + N+N + + I    +A WIK ++P I CLQET  E K+     ++  +     
Sbjct: 1   SYLSIISINLNGLNSPIKRHRVADWIKRHDPSICCLQETHFEPKDAFRLRVRGWSTIFHA 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            G +   GVAIL   +                 +            + +          I
Sbjct: 61  NGPQKKAGVAILISDRLDF--------------KLEAIERDTEGHYIILKGSIQQVDMTI 106

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
            +    ++ +           +  +++  +  GD N      D               E 
Sbjct: 107 INIYAPNRGAARYTSQLLTKIKRHIDKNTVIVGDLNTPLSEIDRTPWQKLSK------ES 160

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           +     L  +   D  R  H     YSF+     ++S     RIDH +      S     
Sbjct: 161 KALNAILDELDLIDIYRTLHPRTKEYSFYSNAHGTFS-----RIDHALGHKTGLSQYQKI 215

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
            I          SDH  + + L+     K  ++S +  ++ I
Sbjct: 216 EIIPCI-----FSDHNALKLELN--HKEKPGRNSNTWRLRTI 250


>gi|281339895|gb|EFB15479.1| hypothetical protein PANDA_018041 [Ailuropoda melanoleuca]
          Length = 359

 Score = 88.3 bits (217), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 50/282 (17%), Positives = 92/282 (32%), Gaps = 34/282 (12%)

Query: 2   SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           S +++ + N+N + + I    +A WIK ++P I CLQET  E K+     ++  +     
Sbjct: 1   SYLSIISINLNGLNSPIKRHRVADWIKRHDPSICCLQETHFEPKDAFRLRVRGWSTIFHA 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            G +   GVAIL   +                 +            + +          I
Sbjct: 61  NGPQKKAGVAILISDRLDF--------------KLEAIERDTEGHYIILKGSIQQVDMTI 106

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
            +    ++ +           +  +++  +  GD N      D               E 
Sbjct: 107 INIYAPNRGAARYTSQLLTKIKRHIDKNTVIVGDLNTPLSEIDRTPWQKLSK------ES 160

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           +     L  +   D  R  H     YSF+     ++S     RIDH +      S     
Sbjct: 161 KALNAILDELDLIDIYRTLHPRTKEYSFYSNAHGTFS-----RIDHALGHKTGLSQYQKI 215

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
            I          SDH  + + L+     K  ++S +  ++ I
Sbjct: 216 EIIPCI-----FSDHNALKLELN--HKEKPGRNSNTWRLRTI 250


>gi|281344302|gb|EFB19886.1| hypothetical protein PANDA_019413 [Ailuropoda melanoleuca]
          Length = 338

 Score = 87.5 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 50/282 (17%), Positives = 92/282 (32%), Gaps = 34/282 (12%)

Query: 2   SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           S +++ + N+N + + I    +A WIK ++P I CLQET  E K+     ++  +     
Sbjct: 1   SYLSIISINLNGLNSPIKRHRVADWIKRHDPSICCLQETHFEPKDAFRLRVRGWSTIFHA 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            G +   GVAIL   +                 +            + +          I
Sbjct: 61  NGPQKKAGVAILISDRLDF--------------KLEAIERDTEGHYIILKGSIQQVDMTI 106

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
            +    ++ +           +  +++  +  GD N      D               E 
Sbjct: 107 INIYAPNRGAARYTSQLLTKIKRHIDKNTVIVGDLNTPLSEIDRTPWQKLSK------ES 160

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           +     L  +   D  R  H     YSF+     ++S     RIDH +      S     
Sbjct: 161 KALNAILDELDLIDIYRTLHPRTKEYSFYSNAHGTFS-----RIDHALGHKTGLSQYQKI 215

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
            I          SDH  + + L+     K  ++S +  ++ I
Sbjct: 216 EIIPCI-----FSDHNALKLELN--HKEKPGRNSNTWRLRTI 250


>gi|311744927|ref|ZP_07718712.1| endonuclease/exonuclease/phosphatase family protein [Algoriphagus
           sp. PR1]
 gi|126577434|gb|EAZ81654.1| endonuclease/exonuclease/phosphatase family protein [Algoriphagus
           sp. PR1]
          Length = 301

 Score = 87.5 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 44/277 (15%), Positives = 81/277 (29%), Gaps = 25/277 (9%)

Query: 4   VTVATWNV-NSI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57
           + V T+N+ N        AR  NL  W+K  NPD++ LQE    D +   +      +  
Sbjct: 31  LKVMTYNIWNGFDWGKDSARQENLIQWVKTQNPDVLALQELCAYDVDKLKKDAAKWGHPY 90

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
               ++     A+ SK     I  ++      +                 + +L     +
Sbjct: 91  VQILKEKGYPTALTSKKPINLIEKNVDNFWHGLLHV------QTFGIDFYVVHLSPSDAD 144

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF-- 175
                    K    ++         +      F   +                       
Sbjct: 145 TRLREAQQIKTRIQEQASDQYIILGDFNSYSPFDAYWLESKSDLRTKMSEEKNEKYSNLR 204

Query: 176 -TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF--------WDYYADSWSKNKGIRIDHI 226
                     +  ++   D      D+   Y+F        +D  A+S  +N+ +RID+I
Sbjct: 205 LGEFDYAPMSEFLSIPAIDVSLGKVDSEESYTFPTPALVGLYDQTAESILENR-VRIDYI 263

Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           + SP          I  +       SDH P++    I
Sbjct: 264 LASPTLAQACSQVEIFNQGI-PETLSDHYPMMAVFQI 299


>gi|221481831|gb|EEE20201.1| ap endonuclease, putative [Toxoplasma gondii GT1]
          Length = 630

 Score = 87.5 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 58/339 (17%), Positives = 95/339 (28%), Gaps = 80/339 (23%)

Query: 4   VTVATWNVNSIRARIHN------LAAWIKENNPDIICLQETKTEDKNFP----------- 46
           +++ TWNVNSI ARI +       + ++++ +PDI+CLQE K      P           
Sbjct: 201 LSIVTWNVNSIAARIRDSRQWFYFSRFLQKIDPDILCLQEVKLAAHGPPGAKRGDGMPRD 260

Query: 47  ---------------FETLQSLN--------------YHIETCGQKSYNGVAILSKYQPI 77
                           E  ++L+              +            V + S    +
Sbjct: 261 HGRIKDSDKVSSVEARELREALHTLLPNHSLLISLADWRYSGQMMFIRKDVQVCSLRYNL 320

Query: 78  EIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL-----YLPHGNPITSTKYDDKISWIK 132
            +      +        +         T    N                           
Sbjct: 321 SLDGCPAHEHDFEGRVILAEFEAFCVLTTYSPNNGATPKSFERRRLWDERMLQFVTQCSS 380

Query: 133 RFLRFASQRLELEEPLIFAGDYNIIPQPH----------------DCYNPIIWENDACFT 176
                      L++PL++ GD N  P+                  D          A  T
Sbjct: 381 SPHCEGLPVQLLKKPLVWVGDLNCAPEDIDLSDPDQFRSVIHETADGTIDPDNIGQAGCT 440

Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDTHHL-------YSFWDYYADSWS---KNKGIRIDH 225
             E R+    L+     DA R  H            YS+  +         +  G+R+DH
Sbjct: 441 DAERRRFRAILERGNLVDAFRELHPRTEPPPLESAEYSWRGFGGSGSRGLLRGLGMRLDH 500

Query: 226 IMLSPEATSLLHSARIDTKPRGWTKP--SDHTPVIVSLD 262
           I+L+      +   RI    +       SDH PV+V   
Sbjct: 501 IVLTETLMPAVELVRICGAGKSKANFFGSDHCPVLVRFK 539


>gi|124504779|ref|XP_001351132.1| AP endonuclease (DNA-[apurinic or apyrimidinic site] lyase),
           putative [Plasmodium falciparum 3D7]
 gi|15375379|emb|CAB39006.2| AP endonuclease (DNA-[apurinic or apyrimidinic site] lyase),
           putative [Plasmodium falciparum 3D7]
          Length = 617

 Score = 87.5 bits (215), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 50/336 (14%), Positives = 91/336 (27%), Gaps = 79/336 (23%)

Query: 6   VATWNVNSIRARIHN------LAAWIKENNPDIICLQETKTED----------------- 42
           + TWN+NSI  R  N         +    N D++C QE +                    
Sbjct: 280 IVTWNMNSITVRYKNKKKWDEFMNFFNNLNADVLCFQEVRLPAMNLSEPCDNKNKNKNKN 339

Query: 43  -----------------------KNFPFETLQSLN-YHIETCGQKSYNGVAILSKYQPIE 78
                                  +    +  +  N Y      + S   V +        
Sbjct: 340 DGIRDRGKIKNSDQKSLADYEIMEQILNDDFKDYNAYFSLANIKYSGQLVLVKKNIHIES 399

Query: 79  IVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFA 138
           I  +L  ++             +      + + Y P+           ++   +      
Sbjct: 400 IRYNLFFENNAHIHHDEGRVILVEFSNFFLLSTYTPNNGFDHVKFERRRLFDEQLQKFVT 459

Query: 139 SQRLELEEPLIFAGDYNIIPQPHD--CYNPIIWENDACFTLEVRQSFQKL---------- 186
             R E ++PL++ GD NI P+  D                 E                  
Sbjct: 460 ILRNEKQKPLVWTGDLNIAPEDIDLSHPAEFRRMKKGNVPKEFIGQPGCTDFERKNFQKI 519

Query: 187 ------------------QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
                                   +     +   ++Y++   +    S NK +RIDH ++
Sbjct: 520 LTAGNLVDSYRYLQNIKLNEDKKNNIKHTPNINDNIYTWRCPFLLGKSCNKAMRIDHFIV 579

Query: 229 SPEATSLLHSARID--TKPRGWTKPSDHTPVIVSLD 262
           S E  + ++   I   +        SDH PVI+ L 
Sbjct: 580 SKEFLNRINKIHIQGFSVFHNNFYGSDHCPVILYLK 615


>gi|2072967|gb|AAC51273.1| putative p150 [Homo sapiens]
          Length = 1275

 Score = 87.2 bits (214), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 63/279 (22%), Positives = 104/279 (37%), Gaps = 34/279 (12%)

Query: 2   SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           S +T+ T N+N + + I    LA+WIK  +P + C+QET    ++     ++      + 
Sbjct: 6   SHITILTLNINGLNSAIKRHRLASWIKSQDPSVCCIQETHLMCRDTHRLKIKGWRKIYQA 65

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            G++   GVAIL   +     T       D +  +I    +I  + L I N+Y P+    
Sbjct: 66  NGKQKKAGVAILVSDKTDFKPT---KIKRDKEGHYIMVKGSIQQEELTILNIYAPNTGAP 122

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K D            +  + +L+   +  GD+N      D         D       
Sbjct: 123 RFIKQD-----------LSDLQRDLDSHTLIMGDFNTPLSTLDRSTRQKVNKDT------ 165

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           ++    L      D  R  H     Y+F+     ++SK     IDHI+ S    S     
Sbjct: 166 QELNSALHQADLIDIYRTLHPKSTEYTFFSAPHHTYSK-----IDHILGSKALLSKCKRT 220

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278
            I T        SDH+ + + L I      Q  ST+  +
Sbjct: 221 EIITNYL-----SDHSAIKLELRI--KNLTQSRSTTWKL 252


>gi|2072961|gb|AAC51269.1| putative p150 [Homo sapiens]
          Length = 1275

 Score = 86.8 bits (213), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 62/279 (22%), Positives = 104/279 (37%), Gaps = 34/279 (12%)

Query: 2   SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           S +T+ T N+N + + I    LA+WIK  +P + C+QET    ++     ++      + 
Sbjct: 6   SHITILTLNINGLNSAIKRHRLASWIKSQDPSVCCIQETHLTCRDTHRLKIKGWRKIYQA 65

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            G++   GVAIL   +     T       D +  +I    +I  + L I N+Y P+    
Sbjct: 66  NGKQKKAGVAILVSDKTDFKPT---KIKRDKEGHYIMVKGSIQQEELTILNIYAPNTGAP 122

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K              +  + +L+   +  GD+N      D         D       
Sbjct: 123 RFIKQ-----------VLSDLQRDLDSHTLIMGDFNTPLSTLDRSTRQKVNKDT------ 165

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           ++    L      D  R  H     Y+F+     ++SK     IDHI+ S    S     
Sbjct: 166 QELNSALHQADLIDIYRTLHPKSTEYTFFSAPHHTYSK-----IDHILGSKALLSKCKRT 220

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278
           +I T        SDH+ + + L I      Q  ST+  +
Sbjct: 221 QIITNYL-----SDHSAIKLELRI--KNLTQSRSTTWKL 252


>gi|237843341|ref|XP_002370968.1| DNA-(apurinic or apyrimidinic site) lyase,  putative [Toxoplasma
           gondii ME49]
 gi|211968632|gb|EEB03828.1| DNA-(apurinic or apyrimidinic site) lyase, putative [Toxoplasma
           gondii ME49]
 gi|221502330|gb|EEE28063.1| ap endonuclease, putative [Toxoplasma gondii VEG]
          Length = 630

 Score = 86.8 bits (213), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 58/336 (17%), Positives = 95/336 (28%), Gaps = 80/336 (23%)

Query: 4   VTVATWNVNSIRARIHN------LAAWIKENNPDIICLQETKTEDKNFP----------- 46
           +++ TWNVNSI ARI +       + ++++ +PDI+CLQE K      P           
Sbjct: 201 LSIVTWNVNSIAARIRDSRQWFYFSRFLQKIDPDILCLQEVKLAAHGPPGAKRGDGMPRD 260

Query: 47  ---------------FETLQSLN--------------YHIETCGQKSYNGVAILSKYQPI 77
                           E  ++L+              +            V + S    +
Sbjct: 261 HGRIKDSDKVSSVEARELREALHTLLPNHSLLISLADWRYSGQMMFIRKDVQVCSLRYNL 320

Query: 78  EIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL-----YLPHGNPITSTKYDDKISWIK 132
            +      +        +         T    N                           
Sbjct: 321 SLDGCPAHEHDFEGRVILAEFEAFCVLTTYSPNNGATPKSFERRRLWDERMLQFVTQCSS 380

Query: 133 RFLRFASQRLELEEPLIFAGDYNIIPQPH----------------DCYNPIIWENDACFT 176
                      L++PL++ GD N  P+                  D          A  T
Sbjct: 381 SPHCEGLPVQLLKKPLVWVGDLNCAPEDIDLSDPDQFRSVIHETADGTIDPDNIGQAGCT 440

Query: 177 L-EVRQSFQKLQNMGFTDAIRATHDTHHL-------YSFWDYYADSWS---KNKGIRIDH 225
             E R+    L+     DA R  H            YS+  +         +  G+R+DH
Sbjct: 441 DAERRRFRAILERGNLVDAFRELHPRTEPPPLESAEYSWRGFGGSGSRGLLRGLGMRLDH 500

Query: 226 IMLSPEATSLLHSARIDTKPRGWTKP--SDHTPVIV 259
           I+L+      +   RI    +       SDH PV+V
Sbjct: 501 IVLTETLMPAVELVRICGAGKSKANFFGSDHCPVLV 536


>gi|242215539|ref|XP_002473584.1| predicted protein [Postia placenta Mad-698-R]
 gi|220727304|gb|EED81227.1| predicted protein [Postia placenta Mad-698-R]
          Length = 475

 Score = 86.4 bits (212), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 39/275 (14%), Positives = 67/275 (24%), Gaps = 47/275 (17%)

Query: 30  PDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAIL------------------ 71
            DIIC QE K+     P +      YH       +  G + +                  
Sbjct: 16  ADIICFQEMKSSRATLPRDVALPGPYHGFFSFPVNKGGYSGVAVYADSRKATPLRAEEGL 75

Query: 72  -----------------------SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108
                                    + P            D                + I
Sbjct: 76  TGVLQPKPPMSPEERVSMSYPLAHDFDPFPDDNGETDSGFDALDSEGRTLVVDFGLFVLI 135

Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168
                   +        +    ++  +R   ++   E  ++   +    P  H   N   
Sbjct: 136 NVYCPAETSDARLPFKMNFHLLLQERIRKLIEKEHREVIVVGDINIAATPLDHAEGNLPS 195

Query: 169 WENDACFTLEVRQSFQKL-QNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHI 226
                            L  N    D IR        LY+ W+    +   N G RID++
Sbjct: 196 SIATFWDHPAREWFRNWLDPNGPMVDVIRMFWPERKGLYTCWNMKLQARETNYGARIDYV 255

Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           +++      +    I        K SDH P+ + L
Sbjct: 256 LVTKGLLPWIKHGDIQ----ASLKGSDHCPIYIDL 286


>gi|106322|pir||B34087 hypothetical protein (L1H 3' region) - human
          Length = 1280

 Score = 86.0 bits (211), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 65/279 (23%), Positives = 103/279 (36%), Gaps = 34/279 (12%)

Query: 2   SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           S +T+ T NVN + A I    LA WIK  +P + C+QET    ++     ++      + 
Sbjct: 11  SHITILTLNVNGLNAPIKRHRLANWIKSQDPSVCCIQETHLMCRDTHRLKIKGWRKIYQA 70

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            G++   GVAIL   +     T       D +  +I    +I  + L I N+Y P+    
Sbjct: 71  NGKQKKAGVAILVSDKTDFKPT---KIKRDKEGHYIMVKGSIQQEELTILNIYAPNTGAP 127

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K              +  + +L+   I  GD+N      D         D       
Sbjct: 128 RFIKQ-----------VLSDLQRDLDSHTIIMGDFNTPLSTLDRSTRQKVNKDI------ 170

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           ++    L      D  R  H     Y+F+     ++SK     IDHI+ S    S     
Sbjct: 171 QELNSALHQADLIDIYRTLHPKSTEYTFFSAPHHTYSK-----IDHILGSKALLSKCKRT 225

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278
            I T        SDH+ + + L I   +  Q  ST+  +
Sbjct: 226 EIITNCL-----SDHSAIKLELRI--KKLTQNHSTTWKL 257


>gi|2072972|gb|AAC51276.1| putative p150 [Homo sapiens]
          Length = 1275

 Score = 86.0 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 62/279 (22%), Positives = 103/279 (36%), Gaps = 34/279 (12%)

Query: 2   SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           S +T+ T N+N + + I    LA+WIK  +P + C+QET    ++     ++      + 
Sbjct: 6   SHITIVTLNINGLNSAIKRHRLASWIKSQDPSVCCIQETHLTCRDTHRLKIKGWRKIYQA 65

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            G++   GVAIL   +     T       D +  +I    +I  + L I N+Y P+    
Sbjct: 66  NGKQKKAGVAILVSDKTDFKPT---KIKRDKEGHYIMVKGSIQQEELTILNIYAPNTGAP 122

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K              +  + +L+   +  GD+N      D         D       
Sbjct: 123 RFIKQ-----------VLSDLQRDLDSHTLIMGDFNTPLSTLDRSTRQKVNKDT------ 165

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           ++    L      D  R  H     Y+F+     ++SK     IDHI+ S    S     
Sbjct: 166 QELNSALHQADLIDIYRTLHPKSTEYTFFSAPHHTYSK-----IDHIVGSKALLSKCKRT 220

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278
            I T        SDH+ + + L I      Q  ST+  +
Sbjct: 221 EIITNYL-----SDHSAIKLELRIKNLS--QSRSTTWKL 252


>gi|49259594|pdb|1VYB|A Chain A, Endonuclease Domain Of Human Line1 Orf2p
 gi|49259595|pdb|1VYB|B Chain B, Endonuclease Domain Of Human Line1 Orf2p
          Length = 238

 Score = 86.0 bits (211), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 58/262 (22%), Positives = 97/262 (37%), Gaps = 32/262 (12%)

Query: 2   SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           S +T+ T N+N + + I    LA+WIK  +P + C+QET    ++     ++      + 
Sbjct: 6   SHITILTLNINGLNSAIKRHRLASWIKSQDPSVCCIQETHLTCRDTHRLKIKGWRKIYQA 65

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            G++   GVAIL   +     T       D +  +I    +I  + L I N+Y P+    
Sbjct: 66  NGKQKKAGVAILVSDKTDFKPT---KIKRDKEGHYIMVKGSIQQEELTILNIYAPNTGAP 122

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K              +  + +L+   +  GD+N      D         D       
Sbjct: 123 RFIKQ-----------VLSDLQRDLDSHTLIMGDFNTPLSTLDRSTRQKVNKDT------ 165

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           ++    L      D  R  H     Y+F+     ++SK     IDHI+ S    S     
Sbjct: 166 QELNSALHQADLIDIYRTLHPKSTEYTFFSAPHHTYSK-----IDHIVGSKALLSKCKRT 220

Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261
            I T        SDH+ + + L
Sbjct: 221 EIITNYL-----SDHSAIKLEL 237


>gi|5052951|gb|AAD38785.1|AF149422_2 unknown [Homo sapiens]
          Length = 1275

 Score = 85.6 bits (210), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 62/279 (22%), Positives = 103/279 (36%), Gaps = 34/279 (12%)

Query: 2   SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           S +T+ T N+N + + I    LA+WIK  +P + C+QET    ++     ++      + 
Sbjct: 6   SHITILTLNINGLNSAIKRHRLASWIKSQDPSVCCIQETHLTCRDTHRLKIKGWRKIYQA 65

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            G++   GVAIL   +     T       D +  +I    +I  + L I N+Y P+    
Sbjct: 66  NGKQKKAGVAILVSDKTDFKPT---KIKRDKEGHYIMVKGSIQQEELTILNIYAPNTGAP 122

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K              +  + +L+   +  GD+N      D         D       
Sbjct: 123 RFIKQ-----------VLSELQRDLDSHTLIMGDFNTPLSTLDRSTRQKVNKDT------ 165

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           ++    L      D  R  H     Y+F+     ++SK     IDHI+ S    S     
Sbjct: 166 QELNSALHQADLIDIYRTLHPKSTEYTFFSAPHHTYSK-----IDHIVGSKALLSKCKRT 220

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278
            I T        SDH+ + + L I      Q  ST+  +
Sbjct: 221 EIITNYL-----SDHSAIKLELRI--KNLTQSRSTTWKL 252


>gi|281349008|gb|EFB24592.1| hypothetical protein PANDA_021886 [Ailuropoda melanoleuca]
 gi|281354349|gb|EFB29933.1| hypothetical protein PANDA_010613 [Ailuropoda melanoleuca]
          Length = 354

 Score = 85.6 bits (210), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 49/277 (17%), Positives = 88/277 (31%), Gaps = 34/277 (12%)

Query: 7   ATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64
            + N+N + + I    +A WIK ++P I CLQET  E K+     ++  +      G + 
Sbjct: 1   ISINLNGLNSPIKRHRVADWIKRHDPSICCLQETHFEPKDAFRLRVRGWSTIFHANGPQK 60

Query: 65  YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124
             GVAIL   +                 +            + +          I +   
Sbjct: 61  KAGVAILISDRLDF--------------KLEAIERDTEGHYIILKGSIQQVDMTIINIYA 106

Query: 125 DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ 184
            ++ +           +  +++  +  GD N      D               E +    
Sbjct: 107 PNRGAARYTSQLLTKIKRHIDKNTVIVGDLNTPLSEIDRTPWQKLSK------ESKALNA 160

Query: 185 KLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK 244
            L  +   D  R  H     YSF+     ++S     RIDH +      S      I   
Sbjct: 161 ILDELDLIDIYRTLHPRTKEYSFYSNAHGTFS-----RIDHALGHKTGLSQYQKIEIIPC 215

Query: 245 PRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
                  SDH  + + L+     K  ++S +  ++ I
Sbjct: 216 I-----FSDHNALKLELN--HKEKPGRNSNTWRLRTI 245


>gi|2072958|gb|AAC51267.1| putative p150 [Homo sapiens]
          Length = 1275

 Score = 85.6 bits (210), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 61/279 (21%), Positives = 102/279 (36%), Gaps = 34/279 (12%)

Query: 2   SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           S +T+ T N+N + + I    LA+WIK  +P + C+QET    ++     ++      + 
Sbjct: 6   SHITILTLNINGLNSAIKRHRLASWIKSQDPSVCCIQETHLTCRDTHRLKIKGWRKIYQA 65

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            G++   GVAIL   +     T       D +  +I    +I  + L I N+Y P+    
Sbjct: 66  NGKQKKAGVAILVSDKTDFKPT---KIKRDKEGHYIMVKGSIQQEELTILNIYAPNTGAP 122

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K              +  + +L+   +  GD+N                D       
Sbjct: 123 RFIKQ-----------VLSDLQRDLDSHTLIMGDFNTPLSTLHRSTRQKVNKDT------ 165

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           ++    L      D  R  H     Y+F+     ++SK     IDHI+ S    S     
Sbjct: 166 QELNSALYQADLIDIYRTLHPKSTEYTFFSAPHHTYSK-----IDHIVGSKALLSKCKRT 220

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278
            I T        SDH+ + + L I      Q  ST+  +
Sbjct: 221 EIITNYL-----SDHSAIKLELRI--KNLTQSRSTTWKL 252


>gi|2072951|gb|AAC51263.1| putative p150 [Homo sapiens]
          Length = 1275

 Score = 85.6 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 62/279 (22%), Positives = 102/279 (36%), Gaps = 34/279 (12%)

Query: 2   SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           S +T+ T N+N + + I    LA WIK  +P + C+QET    ++     ++      + 
Sbjct: 6   SHITILTLNINGLNSAIKRHRLANWIKSQDPSVCCIQETHLTCRDTHRLKIKGWRKIYQA 65

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            G++   GVAIL   +     T       D +  +I    +I  + L I N+Y P+    
Sbjct: 66  NGKQKKAGVAILVSDKTDFKPT---KIKRDKEGHYIMVKGSIQQEELTILNIYAPNTGAP 122

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K              +  + +L+   +  GD+N      D         D       
Sbjct: 123 RFIKQ-----------VLSDLQRDLDSHTLIMGDFNTPLSTLDRSTRQKVNKDT------ 165

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           ++    L      D  R  H     Y+F+     ++SK     IDHI+ S    S     
Sbjct: 166 QELNSALHQADLIDIYRTLHPKSTEYTFFSAPHHTYSK-----IDHIVGSKALLSKCKRT 220

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278
            I T        SDH+ + + L I      Q  ST+  +
Sbjct: 221 EIITNYL-----SDHSAIKLELRI--KNLTQSRSTTWKL 252


>gi|2072977|gb|AAC51279.1| putative p150 [Homo sapiens]
          Length = 1275

 Score = 85.6 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 62/279 (22%), Positives = 103/279 (36%), Gaps = 34/279 (12%)

Query: 2   SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           S +T+ T N+N + + I    LA+WIK  +P + C+QET    ++     ++      + 
Sbjct: 6   SHITILTLNINGLNSAIKRHRLASWIKSQDPSVCCIQETHLTCRDTHRLKIKGWRKIYQA 65

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            G++   GVAIL   +     T       D +  +I    +I  + L I N+Y P+    
Sbjct: 66  NGKQKKAGVAILVSDKTDFKPT---KIKRDKEGHYIMVKGSIQQEELTILNIYAPNTGAP 122

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K              +  + +L+   +  GD+N      D         D       
Sbjct: 123 RFIKQ-----------VLSDLQRDLDSHTLIMGDFNTPLSTLDRSTRQKVNKDT------ 165

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           ++    L      D  R  H     Y+F+     ++SK     IDHI+ S    S     
Sbjct: 166 QELNSALHQADLIDIYRTLHPKSTEYTFFSAPHHTYSK-----IDHIVGSKALLSKCKRT 220

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278
            I T        SDH+ + + L I      Q  ST+  +
Sbjct: 221 EIITNYL-----SDHSAIKLELRI--KNLTQSRSTTWKL 252


>gi|5070622|gb|AAD39215.1|AF148856_2 unknown [Homo sapiens]
          Length = 1275

 Score = 85.6 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 62/279 (22%), Positives = 103/279 (36%), Gaps = 34/279 (12%)

Query: 2   SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           S +T+ T N+N + + I    LA+WIK  +P + C+QET    ++     ++      + 
Sbjct: 6   SHITILTLNINGLNSAIKRHRLASWIKSQDPSVCCIQETHLTCRDTHRLKIKGWRKIYQA 65

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            G++   GVAIL   +     T       D +  +I    +I  + L I N+Y P+    
Sbjct: 66  NGKQKKAGVAILVSDKTDFKPT---KIKRDKEGHYIMVKGSIQQEELTILNIYAPNTGAP 122

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K              +  + +L+   +  GD+N      D         D       
Sbjct: 123 RFIKQ-----------VLSDLQRDLDSHTLIMGDFNTPLSTLDRSTRQKVNKDT------ 165

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           ++    L      D  R  H     Y+F+     ++SK     IDHI+ S    S     
Sbjct: 166 QELNSALHQADLIDIYRTLHPKSTEYTFFSAPHHTYSK-----IDHIVGSKALLSKCKRT 220

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278
            I T        SDH+ + + L I      Q  ST+  +
Sbjct: 221 EIITNYL-----SDHSAIKLELRI--KNLTQSRSTTWKL 252


>gi|339777|gb|AAB59368.1| ORF2 contains a reverse transcriptase domain [Homo sapiens]
          Length = 1275

 Score = 85.6 bits (210), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 62/279 (22%), Positives = 103/279 (36%), Gaps = 34/279 (12%)

Query: 2   SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           S +T+ T N+N + + I    LA+WIK  +P + C+QET    ++     ++      + 
Sbjct: 6   SHITILTLNINGLNSAIKRHRLASWIKSQDPSVCCIQETHLTCRDTHRLKIKGWRKIYQA 65

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            G++   GVAIL   +     T       D +  +I    +I  + L I N+Y P+    
Sbjct: 66  NGKQKKAGVAILVSDKTDFKPT---KIKRDKEGHYIMVKGSIQQEELTILNIYAPNTGAP 122

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K              +  + +L+   +  GD+N      D         D       
Sbjct: 123 RFIKQ-----------VLSDLQRDLDSHTLIMGDFNTPLSTLDRSTRQKVNKDT------ 165

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           ++    L      D  R  H     Y+F+     ++SK     IDHI+ S    S     
Sbjct: 166 QELNSALHQADLIDIYRTLHPKSTEYTFFSAPHHTYSK-----IDHIVGSKALLSKCKRT 220

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278
            I T        SDH+ + + L I      Q  ST+  +
Sbjct: 221 EIITNYL-----SDHSAIKLELRI--KNLTQSRSTTWKL 252


>gi|2072953|gb|AAC51264.1| putative p150 [Homo sapiens]
          Length = 1275

 Score = 85.2 bits (209), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 61/279 (21%), Positives = 100/279 (35%), Gaps = 34/279 (12%)

Query: 2   SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           S +T+ T N+N + + I    LA+WIK  +P + C+QET    ++     ++      + 
Sbjct: 6   SHITILTLNINGLNSAIKRHRLASWIKSQDPSVCCIQETHLTCRDTHRLKIKGWRKIYQA 65

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            G+    GVAIL   +     T       D +  +I    +I  + L I N Y P+    
Sbjct: 66  NGKHKKAGVAILVSDKTDFKPT---KIKRDKEGHYIMVKGSIQQEELTILNTYAPNTGAP 122

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K              +  + +L+   +  GD+N      D         D       
Sbjct: 123 RFIKQ-----------VLSDLQRDLDSHTLIMGDFNTPLSTLDRSTRQKVNKDT------ 165

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           ++    L         R  H     Y+F+     ++SK     IDHI+ S    S     
Sbjct: 166 QELNSALHQADLIGIYRTLHPKSTEYTFFSAPHHTYSK-----IDHIVGSKALLSKCKRT 220

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278
            I T        SDH+ + + L I      Q  ST+  +
Sbjct: 221 EIITNYL-----SDHSAIKLELRI--KNLTQSRSTTWKL 252


>gi|2136112|pir||S65824 reverse transcriptase homolog - human transposon L1.1
 gi|339771|gb|AAA51622.1| ORF2 [Homo sapiens]
          Length = 1275

 Score = 85.2 bits (209), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 62/279 (22%), Positives = 103/279 (36%), Gaps = 34/279 (12%)

Query: 2   SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           S +T+ T N+N + + I    LA+WIK  +P + C+QET    ++     ++      + 
Sbjct: 6   SHITILTLNINGLNSAIKRHRLASWIKSQDPSVCCIQETHLTCRDTHRLKIKGWRKIYQA 65

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            G++   GVAIL   +     T       D +  +I    +I  + L I N+Y P+    
Sbjct: 66  NGKQKKAGVAILVSDKTDFKPT---KIKRDKEGHYIMVKGSIQQEELTILNIYAPNTGAP 122

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K              +  + +L+   +  GD+N      D         D       
Sbjct: 123 RFIKQ-----------VLSDLQRDLDSHTLIMGDFNTPLSTLDRSTRQKVNKDT------ 165

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           ++    L      D  R  H     Y+F+     ++SK     IDHI+ S    S     
Sbjct: 166 QELNSALHQADLIDIYRTLHPKSTEYTFFSAPHHTYSK-----IDHIVGSKALLSKCKRT 220

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278
            I T        SDH+ + + L I      Q  ST+  +
Sbjct: 221 EIITNYL-----SDHSAIKLELRI--KNLTQSRSTTWKL 252


>gi|146399949|gb|ABQ28691.1| apn1 [Neosartorya fischeri]
          Length = 581

 Score = 85.2 bits (209), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 29/280 (10%), Positives = 68/280 (24%), Gaps = 45/280 (16%)

Query: 21  LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET-------------CGQKSYNG 67
           +   ++    DI+  QETK + K+   + +    +                       + 
Sbjct: 1   MFDILE---ADIVVFQETKIQRKDLRDDMVLVPGWDCYFSLPKTKKEEGLAGVLCPPNSS 57

Query: 68  VAILSKYQPIEIVTHLPGDDLDVQARFIEA------TFTINTQTLRIGNLYLPHGNPITS 121
           V+     +  ++  +   + L                  +      +  +Y P     + 
Sbjct: 58  VSFRDLPEEQQVGGYPTIEQLSELEVDAATLDSEGRCVILEFPAFVLLGIYSPANRDESR 117

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
             +      +          +     +    +              I +        +  
Sbjct: 118 DNFRHSFIDLMDARIRNLVAMGKRVFVTGDLNIAKGEIDAAHATEAIRKGTVTEDEFISV 177

Query: 182 SFQKLQNMG-------------------FTDAIRATHDTHHLYSFWDYYADSWSKNKGIR 222
             +++ N                     F            +Y+ W+    +   N G R
Sbjct: 178 PARRVFNQLLSDGRVIGQRDEGREIPVLFDICRSFHPGRRGMYTCWEQRIIARPGNYGSR 237

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
           ID+++ S +       + I     G    SDH PV     
Sbjct: 238 IDYVLCSLDMQDWFSDSNIQEGLMG----SDHCPVYAVFK 273


>gi|111020869|ref|YP_703841.1| exodeoxyribonuclease III, C-terminal [Rhodococcus jostii RHA1]
 gi|110820399|gb|ABG95683.1| possible exodeoxyribonuclease III, C-terminal [Rhodococcus jostii
           RHA1]
          Length = 91

 Score = 85.2 bits (209), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 31/68 (45%)

Query: 196 RATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHT 255
           +        YS+W +    +  + G RID+ + +P       +A  D +P    + SDH 
Sbjct: 24  QHHPGVDGPYSWWSWLGQGFVNDTGWRIDYHLATPRLAQAAVAAGTDREPAADRRMSDHA 83

Query: 256 PVIVSLDI 263
           PV+V  D+
Sbjct: 84  PVVVDYDL 91


>gi|17980447|gb|AAL50637.1| unknown [Homo sapiens]
          Length = 1275

 Score = 84.8 bits (208), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 62/279 (22%), Positives = 103/279 (36%), Gaps = 34/279 (12%)

Query: 2   SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           S +T+ T N+N + + I    LA+WIK  +P + C+QET    ++     ++      + 
Sbjct: 6   SHITILTLNINGLNSAIKRHRLASWIKSQDPSVCCIQETHLTCRDTHRLKIKGWRKIYQA 65

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            G++   GVAIL   +     T       D +  +I    +I  + L I N+Y P+    
Sbjct: 66  NGKQKKAGVAILVSDKTDFKPT---KIKRDKEGHYIMVKGSIQQEELTILNIYAPNTGAP 122

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K              +  + +L+   +  GD+N      D         D       
Sbjct: 123 RFIKQ-----------VLSDLQRDLDSHTLIMGDFNTPLSTLDRSTRQKVNKDT------ 165

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           ++    L      D  R  H     Y+F+     ++SK     IDHI+ S    S     
Sbjct: 166 QELNSALHQADLIDIYRTLHPKSTEYTFFSAPHHTYSK-----IDHIVGSKALLSKCKRT 220

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278
            I T        SDH+ + + L I      Q  ST+  +
Sbjct: 221 EIITNYL-----SDHSAIKLELRI--KNLTQSHSTTWKL 252


>gi|29501194|dbj|BAC67539.1| DNA lyase [Isaria tenuipes]
          Length = 607

 Score = 84.5 bits (207), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 50/301 (16%), Positives = 84/301 (27%), Gaps = 61/301 (20%)

Query: 17  RIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN---YHIETCGQKSYNGVA--- 69
           R      A       DI+ LQETK + K+   + +       Y      +K Y+GVA   
Sbjct: 15  REKRTFQAMFDILEADIVILQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYT 74

Query: 70  ---ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN--------- 117
                +     E +  +            +           +  L               
Sbjct: 75  KNATCAPILAEEGILGILCPPKSNTPYREQPEDRQIGGYPTLAQLSGDVDEALLDSEGRC 134

Query: 118 -----------------PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP 160
                                ++ + + S+++         +   + +I  GD NII   
Sbjct: 135 LILEFPAFVLFGVYSPANRDESRIEFRQSFVEALEARIRNLIAAGKQVILTGDLNIIRSE 194

Query: 161 HDCYNPIIWENDACFTLEVRQSFQKLQ--------------------NMGFTDAIRATHD 200
            D  N          T+E  QS    +                    +    D  R  H 
Sbjct: 195 MDSSNVAEGLKKEGMTMEEWQSMPTRRILNQLLFDGSVIGPRDKAREDGVLWDICRCFHP 254

Query: 201 -THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
               +++ WD   ++   N G RID+I+ S         + I     G    SDH PV  
Sbjct: 255 TRRGMHTCWDTKRNTRPANLGSRIDYILCSDGIKDWFVDSNIQEGLMG----SDHCPVYA 310

Query: 260 S 260
           +
Sbjct: 311 T 311


>gi|281353908|gb|EFB29492.1| hypothetical protein PANDA_003905 [Ailuropoda melanoleuca]
          Length = 319

 Score = 84.5 bits (207), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 49/277 (17%), Positives = 88/277 (31%), Gaps = 34/277 (12%)

Query: 7   ATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64
            + N+N + + I    +A WIK ++P I CLQET  E K+     ++  +      G + 
Sbjct: 1   ISINLNGLNSPIKRHRVADWIKRHDPSICCLQETHFEPKDAFRLRVRGWSTIFHANGPQK 60

Query: 65  YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124
             GVAIL   +                 +            + +          I +   
Sbjct: 61  KAGVAILISDRLDF--------------KLEAIERDTEGHYIILKGSIQQVDMTIINIYA 106

Query: 125 DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ 184
            ++ +           +  +++  +  GD N      D               E +    
Sbjct: 107 PNRGAARYTSQLLTKIKRHIDKNTVIVGDLNTPLSEIDRTPWQKLSK------ESKALNA 160

Query: 185 KLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK 244
            L  +   D  R  H     YSF+     ++S     RIDH +      S      I   
Sbjct: 161 ILDELDLIDIYRTLHPRTKEYSFYSNAHGTFS-----RIDHALGHKTGLSQYQKIEIIPC 215

Query: 245 PRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
                  SDH  + + L+     K  ++S +  ++ I
Sbjct: 216 I-----FSDHNALKLELN--HKEKPGRNSNTWRLRTI 245


>gi|2120083|pir||I38588 reverse transcriptase homolog - human retrotransposon L1
 gi|483916|gb|AAB60345.1| ORF2 [Homo sapiens]
          Length = 1275

 Score = 84.5 bits (207), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 62/279 (22%), Positives = 103/279 (36%), Gaps = 34/279 (12%)

Query: 2   SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           S +T+ T N+N + + I    LA+WIK  +P + C+QET    ++     ++      + 
Sbjct: 6   SHITILTLNINGLNSAIKRHRLASWIKSQDPSVCCIQETHLMCRDTHRLKIKGWRKIYQA 65

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            G++   GVAIL   +     T       D +  +I    +I  + L I N+Y P+    
Sbjct: 66  NGKQKKAGVAILVSDKTDFKPT---KIKRDKEGHYIMVKGSIQQEELTILNIYAPNTGAP 122

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K              +  + +L+   +  GD+N      D         D       
Sbjct: 123 RFIKQ-----------VLSDLQRDLDSHTLIMGDFNTPLSILDRSTRQKVNKDT------ 165

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           ++    L      D  R  H     Y+F+     ++SK     IDHI+ S    S     
Sbjct: 166 QELNSALHQADLIDIYRTLHPKSTEYTFFSAPHHTYSK-----IDHIVGSKALLSKCKRT 220

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278
            I T        SDH+ + + L I      Q  ST+  +
Sbjct: 221 EIITNYL-----SDHSAIKLELRI--KNLTQSRSTTWKL 252


>gi|294901077|ref|XP_002777223.1| retrovirus polyprotein, putative [Perkinsus marinus ATCC 50983]
 gi|239884754|gb|EER09039.1| retrovirus polyprotein, putative [Perkinsus marinus ATCC 50983]
          Length = 2861

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 54/291 (18%), Positives = 96/291 (32%), Gaps = 39/291 (13%)

Query: 7    ATWNVNSIRARIHN------LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN-----Y 55
             +WN+N +R  + +      L   ++   P I+ L ETK   +       + L+     Y
Sbjct: 836  LSWNINGLRGFLKSEANVSCLNRLVRNELPAIMVLTETKLTQEKKDRAFTKLLDSLPVRY 895

Query: 56   HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARF------------IEATFTINT 103
             + +       G A ++      +          +                 E   T + 
Sbjct: 896  DVFSAESAGRKGYAGVAVLLKRAVDVGYDDGLCLIHEPITGIPSRFFDGEQDEEEDTTSG 955

Query: 104  QTLRIGNLYL--------PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYN 155
            + L I               G  +   +Y  K     R      +    E+PLI AGD N
Sbjct: 956  RVLTIELRQCTLVAVYVPNSGGDLRFLEYRSKWDVAFRRYMKWLRSRAGEKPLIIAGDLN 1015

Query: 156  IIPQPHDCYNPIIWENDACFTL--EVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYA 212
                  D  +       +      EV    +  + +   D  R  H     +YSF+    
Sbjct: 1016 ACGSDLDIGDTRREAPHSPSIQPCEVEAFERLQREVSLCDTFRIVHPEVAGVYSFYC--- 1072

Query: 213  DSWSK--NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
            +++ K  N G RID+I++S E +  +  + +     G     DH P++  L
Sbjct: 1073 NAYEKKLNFGRRIDYILVSSEQSDCVVDSTVFYAEFGLGYRPDHCPILAEL 1123


>gi|294899286|ref|XP_002776572.1| retrovirus polyprotein, putative [Perkinsus marinus ATCC 50983]
 gi|239883614|gb|EER08388.1| retrovirus polyprotein, putative [Perkinsus marinus ATCC 50983]
          Length = 2563

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 54/291 (18%), Positives = 96/291 (32%), Gaps = 39/291 (13%)

Query: 7   ATWNVNSIRARIHN------LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN-----Y 55
            +WN+N +R  + +      L   ++   P I+ L ETK   +       + L+     Y
Sbjct: 560 LSWNINGLRGFLKSEANVSCLNRLVRNELPAIMVLTETKLTQEKKDRAFTKLLDSLPVRY 619

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARF------------IEATFTINT 103
            + +       G A ++      +          +                 E   T + 
Sbjct: 620 DVFSAESAGRKGYAGVAVLLKRAVDVGYDDGLCLIHEPITGIPSRFFDGEQDEEEDTTSG 679

Query: 104 QTLRIGNLYL--------PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYN 155
           + L I               G  +   +Y  K     R      +    E+PLI AGD N
Sbjct: 680 RVLTIELRQCTLVAVYVPNSGGDLRFLEYRSKWDVAFRRYMKWLRSRAGEKPLIIAGDLN 739

Query: 156 IIPQPHDCYNPIIWENDACFTL--EVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYA 212
                 D  +       +      EV    +  + +   D  R  H     +YSF+    
Sbjct: 740 ACGSDLDIGDTRREAPHSPSIQPCEVEAFERLQREVSLCDTFRIVHPEVAGVYSFYC--- 796

Query: 213 DSWSK--NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           +++ K  N G RID+I++S E +  +  + +     G     DH P++  L
Sbjct: 797 NAYEKKLNFGRRIDYILVSSEQSDCVVDSTVFYAEFGLGYRPDHCPILAEL 847


>gi|23004987|ref|ZP_00048036.1| COG0708: Exonuclease III [Magnetospirillum magnetotacticum MS-1]
          Length = 106

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 1/70 (1%)

Query: 188 NMGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLLHSARIDTKPR 246
                 A   T +   +Y++W Y +  W+  NKG R+DH  +SP+    L    +  + R
Sbjct: 19  AGWIDAARFLTPEPEKIYTWWSYRSPDWAAANKGRRLDHAWVSPDLAGTLRKVEVFREAR 78

Query: 247 GWTKPSDHTP 256
           GW KPSDH P
Sbjct: 79  GWEKPSDHAP 88


>gi|221132889|ref|XP_002158912.1| PREDICTED: similar to predicted protein, partial [Hydra
           magnipapillata]
          Length = 98

 Score = 84.5 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 5/101 (4%)

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIR 222
            NP   + +A FT E R  F  L   G+ D  R  +      Y+FW Y  ++ SKNKG R
Sbjct: 2   ANPNSNKRNAGFTEEERSDFTALLEDGYIDTFRKLNPEKTGAYTFWTYMMNARSKNKGWR 61

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +D+ +++ +    +  + I +   G    SDH P++++L I
Sbjct: 62  LDYFIVTKDIEDDICDSVIRSSVMG----SDHCPIVLNLAI 98


>gi|315654117|ref|ZP_07907033.1| exodeoxyribonuclease III [Lactobacillus iners ATCC 55195]
 gi|325912295|ref|ZP_08174692.1| putative exodeoxyribonuclease III [Lactobacillus iners UPII 143-D]
 gi|315488813|gb|EFU78459.1| exodeoxyribonuclease III [Lactobacillus iners ATCC 55195]
 gi|325475954|gb|EGC79123.1| putative exodeoxyribonuclease III [Lactobacillus iners UPII 143-D]
          Length = 168

 Score = 84.1 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 10/167 (5%)

Query: 100 TINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159
           T+   +  +  +Y P+         D +I   K   +     L+  +P+I +GDYN+  Q
Sbjct: 9   TLEFNSFYLTQVYTPNSGNELKRLADREIWDTK--YQEYLTELDQNKPVIASGDYNVAHQ 66

Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYY-ADSWSK 217
             D  +P    ++A FT E R+ F KL ++GF D  R  + D   +YS+W      S + 
Sbjct: 67  EIDLKHPETNHHNAGFTDEERKGFSKLLSLGFIDTFRYINGDITDVYSWWSQRIRTSKTN 126

Query: 218 NKGIRIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           N G RID+ ++S      +  ++ IDT  R      DH P+++ +D+
Sbjct: 127 NAGWRIDYYLVSQRLADKIEQSKMIDTGDRK-----DHCPILLKIDL 168


>gi|257879257|ref|ZP_05658910.1| exodeoxyribonuclease [Enterococcus faecium 1,230,933]
 gi|257813485|gb|EEV42243.1| exodeoxyribonuclease [Enterococcus faecium 1,230,933]
          Length = 171

 Score = 84.1 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 54/149 (36%), Gaps = 7/149 (4%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++   +WNVN +RA +  N      E + D  CLQETK +      + L     +     
Sbjct: 19  LLKFISWNVNGLRAIVNKNFLEVFHELDADFFCLQETKLQAGQIDLD-LPGYYQYWNYAE 77

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +K Y+G AI +K   +     +  D  D + R I   ++                +    
Sbjct: 78  RKGYSGTAIFAKKPALNATYGMGIDIHDTEGRLITLEYSDF-----FLVTCYTPNSQSEL 132

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIF 150
            + D ++ W + F  +     + +     
Sbjct: 133 KRLDYRLEWEEAFYNYLENLKKQKTSHRV 161


>gi|221104979|ref|XP_002163931.1| PREDICTED: similar to APEX nuclease (multifunctional DNA repair
           enzyme) 1, partial [Hydra magnipapillata]
          Length = 184

 Score = 84.1 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 26/95 (27%), Positives = 50/95 (52%), Gaps = 14/95 (14%)

Query: 2   SVVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQ--------- 51
           S + + +WNV  +RA +  N   ++ E +PD++CLQETK  + + P + LQ         
Sbjct: 29  STLKICSWNVAGLRAWVNKNGLNYVIEEDPDVLCLQETKCTENDLPGQVLQMKNGPKVTN 88

Query: 52  --SLNYHIETCG--QKSYNGVAILSKYQPIEIVTH 82
             +  Y++  C   +K  +GV++  K +P+++   
Sbjct: 89  VSNSGYYMYWCNAKKKGCSGVSLWCKLKPLKVTYG 123


>gi|309804045|ref|ZP_07698126.1| putative exodeoxyribonuclease III [Lactobacillus iners LactinV
           11V1-d]
 gi|309804894|ref|ZP_07698956.1| putative exodeoxyribonuclease III [Lactobacillus iners LactinV
           09V1-c]
 gi|309807812|ref|ZP_07701744.1| putative exodeoxyribonuclease III [Lactobacillus iners LactinV
           01V1-a]
 gi|309809734|ref|ZP_07703588.1| putative exodeoxyribonuclease III [Lactobacillus iners SPIN
           2503V10-D]
 gi|308163813|gb|EFO66079.1| putative exodeoxyribonuclease III [Lactobacillus iners LactinV
           11V1-d]
 gi|308165833|gb|EFO68054.1| putative exodeoxyribonuclease III [Lactobacillus iners LactinV
           09V1-c]
 gi|308168914|gb|EFO71000.1| putative exodeoxyribonuclease III [Lactobacillus iners LactinV
           01V1-a]
 gi|308169913|gb|EFO71952.1| putative exodeoxyribonuclease III [Lactobacillus iners SPIN
           2503V10-D]
          Length = 168

 Score = 84.1 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 48/167 (28%), Positives = 81/167 (48%), Gaps = 10/167 (5%)

Query: 100 TINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159
           T+   T  +  +Y P+         D +I   K   +    +L+  +P+I +GDYN+  Q
Sbjct: 9   TLEFDTFYLTQVYTPNSGNELKRLADREIWDTK--YQEYLAKLDQNKPVIASGDYNVAHQ 66

Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYY-ADSWSK 217
             D  +P    ++A FT E R+ F KL ++GF D  R  + D   +YS+W      S + 
Sbjct: 67  EIDLKHPETNHHNAGFTDEERKGFSKLLSLGFIDTFRYINGDITDVYSWWSQRIRTSKTN 126

Query: 218 NKGIRIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
           N G RID+ ++S      +  ++ IDT  R      DH P+++ +D+
Sbjct: 127 NAGWRIDYYLVSQRLADKIEQSKMIDTGDRK-----DHCPILLKIDL 168


>gi|281354577|gb|EFB30161.1| hypothetical protein PANDA_018242 [Ailuropoda melanoleuca]
          Length = 354

 Score = 84.1 bits (206), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 51/277 (18%), Positives = 90/277 (32%), Gaps = 34/277 (12%)

Query: 7   ATWNVNSIRARI--HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64
            T NV+ ++A +  H +A WIK ++P I CLQET  E K+     ++  +      G + 
Sbjct: 1   LTLNVSGLKATLNHHRVADWIKRHDPSICCLQETHFEPKDAFRLRVRGWSTIFHANGPQK 60

Query: 65  YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124
             GVAIL   +                 +            + +          I +   
Sbjct: 61  KAGVAILISDRLDF--------------KLEAIERDTEGHYIILKGSIQQVDMTIINIYA 106

Query: 125 DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ 184
            ++ +           +  +++  +  GD N      D               E +    
Sbjct: 107 PNRGAARYTSQLLTKIKRHIDKNTVIVGDLNTPLSEIDRTPWQKLSK------ESKALNA 160

Query: 185 KLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK 244
            L  +   D  R  H     YSF+     ++S     RIDH +      S      I   
Sbjct: 161 ILDELDLIDIYRTLHPRTKEYSFYSNAHGTFS-----RIDHALGHKTGLSQYQKIEIIPC 215

Query: 245 PRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
                  SDH  + + L+     K  ++S +  ++ I
Sbjct: 216 I-----FSDHNALKLELN--HKEKPGRNSNTWRLRTI 245


>gi|90077432|dbj|BAE88396.1| unnamed protein product [Macaca fascicularis]
          Length = 173

 Score = 83.7 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 5/114 (4%)

Query: 2   SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN----YH 56
           + + + +WNV+ +RA I      W+KE  PDI+ LQETK  +   P E  +       Y 
Sbjct: 60  ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILRLQETKCSENKLPAELQELPGLSHQYW 119

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
                ++ Y+GV +LS++ P+++   +  ++ D + R I A F        +  
Sbjct: 120 SAPSDKEGYSGVGLLSRHCPLKVSYGIGEEEHDQEGRVIVAEFDSFVLVTTVCT 173


>gi|74007557|ref|XP_538066.2| PREDICTED: similar to LINE-1 reverse transcriptase homolog [Canis
           familiaris]
          Length = 1275

 Score = 83.7 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 61/282 (21%), Positives = 101/282 (35%), Gaps = 34/282 (12%)

Query: 2   SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           S +++AT NVN +   I    ++ WIK+ +P I CLQET    K+     ++       +
Sbjct: 6   SYLSIATLNVNGLNDTIKRRRVSDWIKKQDPSICCLQETHFRQKDTYSLKIKGWRTIYHS 65

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            G +   GV IL   +             D +  +I    +I  + LRI N+Y P+    
Sbjct: 66  NGPQKKAGVTILISDKLKFTPK---TVVRDEEGHYIILKGSIQQEDLRIINIYAPNVGAA 122

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                                +  L+   +  GD+ +     D  +            E 
Sbjct: 123 KYINQ-----------LLTKVKKYLDNNTLILGDFKLALSILDRSSKHNISK------ET 165

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R     L  M FTD  R  H     Y+F+     ++S     RIDHI+      +     
Sbjct: 166 RALNDTLDQMDFTDIYRTLHPNSTEYTFFSSAHGTFS-----RIDHILGHKSGLNRYQKI 220

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
            I          SDH  + + L+    +K  + S +  ++ I
Sbjct: 221 GIVPCI-----FSDHNALKLELN--HNKKFGRTSNTWRLRTI 255


>gi|74007944|ref|XP_850691.1| PREDICTED: similar to LINE-1 reverse transcriptase homolog [Canis
           familiaris]
          Length = 1196

 Score = 83.7 bits (205), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 61/282 (21%), Positives = 101/282 (35%), Gaps = 34/282 (12%)

Query: 2   SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           S +++ T NVN +   I    ++ WIK+ +P I CLQET    K+     ++       +
Sbjct: 5   SYLSIVTLNVNGLNDPIKRRRISDWIKKQDPSICCLQETHFRQKDTYSLKIKGWRTIYHS 64

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            G +   GVAIL   +             D +  +I    +I  + L I N+Y P+    
Sbjct: 65  NGPQKKAGVAILISDKLKFTPK---TVVRDEEGHYIILKGSIQQEDLTILNIYAPNVGAA 121

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                                +  L+   +  GD+N+     D  +            E 
Sbjct: 122 KYINQ-----------LLTKVKKYLDNNTLILGDFNLALSILDRSSKHNISK------ET 164

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R     L  M FTD  R  H     Y+F+     ++S     RIDHI+      +     
Sbjct: 165 RALNDTLDQMDFTDIYRTLHPNSTEYTFFSSAHGTFS-----RIDHILGHKSGLNRYQKI 219

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
            I          SDH  + + L+    +K  + S +  ++ I
Sbjct: 220 GIVPCI-----FSDHNALKLELN--HNKKFGRTSNTWRLRTI 254


>gi|124441686|gb|ABN11482.1| DNA lyase [Ascosphaera apis]
          Length = 533

 Score = 83.3 bits (204), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 36/295 (12%), Positives = 68/295 (23%), Gaps = 49/295 (16%)

Query: 21  LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80
           +   ++    DI+ LQETK + K+   + +    +       K              +  
Sbjct: 1   MFDVLE---ADIVVLQETKIQRKDLRDDMVLVPGWDCFFSFPKYKKDGITGINPSTTKDT 57

Query: 81  THLPGDDLDVQARFIEATF------------------TINTQTLRIGNLYLPHGNPITST 122
                   +    +                        +  Q   +  +YLP        
Sbjct: 58  AFRDLPSHEQIGGYPSEEQLNLSLVDAETLDSEGRCVILEFQAFVLIGVYLPAVRNELRD 117

Query: 123 KYDDKISWIKRFLRFASQRLELEEP-------------------LIFAGDYNIIPQPHDC 163
            +      +          L                         +     +        
Sbjct: 118 DFRLGFLRVFECRVRNLIALGKRIIVAGDLNISRDVQDSASALADVLGERLSREQYISTP 177

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIR 222
              +  E     +                D  R  H     +++ WD   ++   N G R
Sbjct: 178 SRALFNELVTDSSDYDSSEPNNNAQCVLWDICRDFHPSRKGMFTCWDMKTNARPGNFGSR 237

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD----IPEPRKKQQDS 273
           ID+I+ S        +A       G    SDH PV   L     +     + +D 
Sbjct: 238 IDYILCSLNIRDWFVAADAQQHLMG----SDHCPVFAVLKENILLDAKETRLRDV 288


>gi|291514133|emb|CBK63343.1| Exonuclease III [Alistipes shahii WAL 8301]
          Length = 297

 Score = 83.3 bits (204), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 47/268 (17%), Positives = 81/268 (30%), Gaps = 16/268 (5%)

Query: 4   VTVATWNV-NSIRAR-----IHNLAAWIKENNPDIICLQETKTED-KNFPFETLQ-SLNY 55
           + +  +N+   +R R         A W+++ NPDI+ LQE    D   F  ETL     +
Sbjct: 33  LKIICYNILYGMR-RDTTQGKRLFAEWVRQQNPDILALQEV--NDFTQFTLETLAAEYGH 89

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
                 +        +       +        ++V               +     Y   
Sbjct: 90  DYAVISKDPKLIPGSVGSRTKFPVSISSKSPVVNVDKVLDNMWHGFIKCKV---EGYNVI 146

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
              +    Y+ +   I+  L    Q    E+ +I      + P     Y    +      
Sbjct: 147 VLHLNPHLYEARRREIRTVLETVKQSGLFEKWIIMGDFNTVSPLDSAVYADGKYLQRKKE 206

Query: 176 TLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             +V      L +     A+     D   + + W    +        RID I +SP+   
Sbjct: 207 QEKVHTRNNNLPDGQLDFAVSQAILDFGFVDAGWADRENYRKDGFTRRIDFIYVSPDLRD 266

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
            + S R  T        SDH PV + L 
Sbjct: 267 RIVSCRYITDDFTAAY-SDHIPVELVLK 293


>gi|225047|prf||1207289A reverse transcriptase related protein
          Length = 1259

 Score = 82.9 bits (203), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 64/279 (22%), Positives = 102/279 (36%), Gaps = 34/279 (12%)

Query: 2   SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           S +T+ T NVN + A I    LA WIK  +P + C+QET    ++     ++      + 
Sbjct: 5   SHITILTLNVNGLNAPIKRHRLANWIKSQDPSVCCIQETHLTCRDTHRLKIKGWRNIYQA 64

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            G++   GVAIL   +     T       D +  +I    +I  + L I N+Y P+    
Sbjct: 65  NGKQKKAGVAILVSDKTDFKPT---KIKRDKEGHYIMVKGSIQQEELTILNIYAPNTGAP 121

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K              +  + +L+   I  GD+N      D         D       
Sbjct: 122 RFIKQ-----------VLSDLQRDLDSHTIIMGDFNTPLSTLDRSTRQKINKDI------ 164

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           ++    L      D  R  H     Y+F+     ++SK      DHI+ S    S     
Sbjct: 165 QELNSALHQADLIDIYRTLHPKSTEYTFFSAPHHTYSKT-----DHILGSKTLLSKCKRT 219

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278
            I T        SDH+ + + L I   +  Q  ST+  +
Sbjct: 220 EIITNCL-----SDHSAIKLELRI--KKLTQNHSTTWKL 251


>gi|152149537|pdb|2V0R|A Chain A, Crystal Structure Of A Hairpin Exchange Variant (Ltx) Of
           The Targeting Line-1 Retrotransposon Endonuclease
 gi|152149538|pdb|2V0R|B Chain B, Crystal Structure Of A Hairpin Exchange Variant (Ltx) Of
           The Targeting Line-1 Retrotransposon Endonuclease
          Length = 240

 Score = 82.9 bits (203), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 57/262 (21%), Positives = 96/262 (36%), Gaps = 30/262 (11%)

Query: 2   SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           S +T+ T N+N + + I    LA+WIK  +P + C+QET    ++     ++      + 
Sbjct: 6   SHITILTLNINGLNSAIKRHRLASWIKSQDPSVCCIQETHLTCRDTHRLKIKGWRKIYQA 65

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            G++   GVAIL   +     T       D +  +I    +I  + L I N+Y P+    
Sbjct: 66  NGKQKKAGVAILVSDKTDFKPT---KIKRDKEGHYIMVKGSIQQEELTILNIYAPNTGAP 122

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K              +  + +L+   +  GD+N      D         D       
Sbjct: 123 RFIKQ-----------VLSDLQRDLDSHTLIMGDFNTPLSTLDRSTRQKVNKDT------ 165

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           ++    L      D  R  H     Y++        S++K   IDHI+ S    S     
Sbjct: 166 QELNSALHQADLIDIYRTLHPKSTEYTYVRVRDGHVSQSK---IDHIVGSKALLSKCKRT 222

Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261
            I T        SDH+ + + L
Sbjct: 223 EIITNYL-----SDHSAIKLEL 239


>gi|2072964|gb|AAC51271.1| putative p150 [Homo sapiens]
          Length = 1275

 Score = 82.9 bits (203), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 63/279 (22%), Positives = 103/279 (36%), Gaps = 34/279 (12%)

Query: 2   SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           S +T+ T NVN + + I    LA+WIK  +P + C+QET    ++     ++      + 
Sbjct: 6   SHITILTLNVNGLNSPIKRHRLASWIKSQDPSVCCIQETHLTCRDTHRLKIKGWRKIYQA 65

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            G++   GVAIL   +     T       D +  +I    +I  + L I N+Y P+    
Sbjct: 66  NGKQKKAGVAILVSDKTDFKPT---KIKRDKEGHYIMVKGSIQQEELTILNIYAPNTGAP 122

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K              +  + +L+   +  GD+N      D         D       
Sbjct: 123 RFIKQ-----------VLSDLQRDLDSHTLIMGDFNTPLSILDRSTRQKVNKDT------ 165

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           ++    L      D  R  H     Y+F+     ++SK     IDHI+ S    S     
Sbjct: 166 QELNSALHQTDLIDIYRTLHPKSTEYTFFSAPHHTYSK-----IDHIVGSKALLSKCKRT 220

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278
            I T        SDH+ + + L I      Q  ST+  +
Sbjct: 221 EIITNYL-----SDHSAIKLELRI--KNLTQSRSTTWKL 252


>gi|162660705|gb|EDQ48496.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 153

 Score = 82.5 bits (202), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 37/119 (31%), Positives = 62/119 (52%), Gaps = 3/119 (2%)

Query: 2   SVVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFP--FETLQSLNYHIE 58
           S+  + + N+N IR+     + AWI+   PD IC+QE K +  +    FE L  L  H  
Sbjct: 4   SLFKLTSLNLNGIRSASTKGVEAWIEATAPDCICVQEIKAQAADMTGRFELLAGLRGHFH 63

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
              +K Y+GV + S+++P ++V      + D + R++EA F    + L I + Y P G+
Sbjct: 64  YAEKKGYSGVGVYSRHEPSDVVVGFGSHEFDAEGRYVEARFDTPARKLSIISAYFPSGS 122


>gi|330895700|gb|EGH27990.1| exodeoxyribonuclease III [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 181

 Score = 82.5 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 41/183 (22%), Positives = 73/183 (39%), Gaps = 8/183 (4%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC-- 60
           + + + NVN I+A +   L +W++  N D+ICLQ+T+           Q   Y +  C  
Sbjct: 1   MRIISVNVNGIQAAVERGLLSWLQAQNADVICLQDTRASTFELDDPAFQLDGYFLYACEA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
              +  GVA+ S+ QP  +++ L  +  D   R+++A F      + I  L  P G    
Sbjct: 61  EVPAQGGVALYSRLQPKAVISGLGFETADRYGRYLQADFD----KVSIATLLFPSG-MNG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
               + K   +  F ++  ++       I+ G   +  Q  D  N    +    F    R
Sbjct: 116 DEDLNQKFKLMDDFGKYMDKQRRKRREYIYCGSLYVAQQKLDIKNWRDSQQSPGFLAPER 175

Query: 181 QSF 183
              
Sbjct: 176 AWM 178


>gi|73966507|ref|XP_851979.1| PREDICTED: similar to LINE-1 reverse transcriptase homolog [Canis
           familiaris]
          Length = 1275

 Score = 82.5 bits (202), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 61/282 (21%), Positives = 101/282 (35%), Gaps = 34/282 (12%)

Query: 2   SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           S +++ T NVN +   I    ++ WIK+ +P I CLQET    K+     ++       +
Sbjct: 6   SYLSIVTLNVNGLNDPIKRRRVSDWIKKQDPSICCLQETHFRQKDTYSLKIKGWRTIYHS 65

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            G +   GVAIL   +             D +  +I    +I  + L I N+Y P+    
Sbjct: 66  NGPQKKAGVAILISDKLKFTPK---TVVRDEEGHYIILQGSIQQEDLTILNIYAPNVGAA 122

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                                +  L+   +  GD+N+     D  +            E 
Sbjct: 123 KYINQ-----------LLTKVKKYLDNNTLILGDFNLALSILDRSSKHNISK------ET 165

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R     L  M FTD  R  H     Y+F+     ++S     RIDHI+      +     
Sbjct: 166 RALNDTLDQMDFTDIYRTLHPNSTEYTFFSSAHGTFS-----RIDHILGHKSGLNRYQKI 220

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
            I          SDH  + + L+    +K  + S +  ++ I
Sbjct: 221 GIVPCI-----FSDHNALKLELN--HNKKFGRTSNTWRLRTI 255


>gi|73973941|ref|XP_854759.1| PREDICTED: similar to LINE-1 reverse transcriptase homolog [Canis
           familiaris]
          Length = 1275

 Score = 82.1 bits (201), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 61/282 (21%), Positives = 101/282 (35%), Gaps = 34/282 (12%)

Query: 2   SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           S +++ T NVN +   I    ++ WIK+ +P I CLQET    K+     ++       +
Sbjct: 6   SYLSIVTLNVNGLNDPIKRRRVSDWIKKQDPSICCLQETHFRQKDTYSLKIKGWRTIYHS 65

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            G +   GVAIL   +             D +  +I    +I  + L I N+Y P+    
Sbjct: 66  KGPQKKAGVAILISDKLKFTPK---TVVRDEEGHYIILKGSIQQEDLTILNIYAPNVGAA 122

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                                +  L+   +  GD+N+     D  +            E 
Sbjct: 123 KYINQ-----------LLTKVKKYLDNNTLILGDFNLALSILDRSSKHNISK------ET 165

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R     L  M FTD  R  H     Y+F+     ++S     RIDHI+      +     
Sbjct: 166 RALNDTLDQMDFTDIYRTLHPNSTEYTFFSSAHGTFS-----RIDHILGHKSGLNRYQKI 220

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
            I          SDH  + + L+    +K  + S +  ++ I
Sbjct: 221 GIVPCI-----FSDHNALKLELN--HNKKFGRTSNTWRLRTI 255


>gi|73985407|ref|XP_850132.1| PREDICTED: similar to LINE-1 reverse transcriptase homolog [Canis
           familiaris]
          Length = 1275

 Score = 82.1 bits (201), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 61/282 (21%), Positives = 101/282 (35%), Gaps = 34/282 (12%)

Query: 2   SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           S +++ T NVN +   I    ++ WIK+ +P I CLQET    K+     ++       +
Sbjct: 6   SYLSIVTLNVNGLNDPIKRRRVSDWIKKQDPSICCLQETHFRQKDTYSLKIKGWRTIYHS 65

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            G +   GVAIL   +             D +  +I    +I  + L I N+Y P+    
Sbjct: 66  NGPQKKAGVAILISDKLKFTPK---TVVRDEEGHYIILKGSIQQEDLTILNIYAPNVGAA 122

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                                +  L+   +  GD+N+     D  +            E 
Sbjct: 123 KYINQ-----------LLTKVKKYLDNNTLILGDFNLALSILDRSSKQNISK------ET 165

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R     L  M FTD  R  H     Y+F+     ++S     RIDHI+      +     
Sbjct: 166 RALNDTLDQMDFTDIYRTLHPNSTEYTFFSSAHGTFS-----RIDHILGHKSGLNRYQKI 220

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
            I          SDH  + + L+    +K  + S +  ++ I
Sbjct: 221 GIVPCI-----FSDHNALKLELN--HNKKFGRTSNTWRLRTI 255


>gi|73976474|ref|XP_536180.2| PREDICTED: similar to LINE-1 reverse transcriptase homolog [Canis
           familiaris]
          Length = 1274

 Score = 81.8 bits (200), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 61/282 (21%), Positives = 101/282 (35%), Gaps = 34/282 (12%)

Query: 2   SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           S +++ T NVN +   I    ++ WIK+ +P I CLQET    K+     ++       +
Sbjct: 5   SYLSIVTLNVNGLNDPIKRRRVSDWIKKQDPSICCLQETHFRQKDTYSLKIKGWRTIYHS 64

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            G +   GVAIL   +             D +  +I    +I  + L I N+Y P+    
Sbjct: 65  NGPQKKAGVAILISDKLKFTPK---TVVRDEEGHYIILKGSIQQEDLTILNIYAPNVGAA 121

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                                +  L+   +  GD+N+     D  +            E 
Sbjct: 122 KYINQ-----------LLTKVKKYLDNNTLILGDFNLALSILDRSSKQNISK------ET 164

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R     L  M FTD  R  H     Y+F+     ++S     RIDHI+      +     
Sbjct: 165 RALNDTLDQMDFTDIYRTLHPNSTEYTFFSSAHGTFS-----RIDHILGHKSGLNRYQKI 219

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
            I          SDH  + + L+    +K  + S +  ++ I
Sbjct: 220 GIVPCI-----FSDHNALKLELN--HNKKFGRTSNTWRLRTI 254


>gi|73973846|ref|XP_854069.1| PREDICTED: similar to LINE-1 reverse transcriptase homolog [Canis
           familiaris]
          Length = 1275

 Score = 81.8 bits (200), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 61/282 (21%), Positives = 102/282 (36%), Gaps = 34/282 (12%)

Query: 2   SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           S +++ T NVN +   I    ++ WIK+ +P I CLQET    K+     ++       +
Sbjct: 6   SYLSIVTLNVNGLNDPIKRRRVSDWIKKQDPSICCLQETHFRQKDTYSLKIKGWRTIYHS 65

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            G +   GVAIL   +             D +  +I    +I  + L I N+Y P+    
Sbjct: 66  NGPQKKAGVAILISDKLKFTPK---TVVRDEEGHYIILKGSIQQEDLTILNIYAPNVGAA 122

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                                +  L+   +  GD+N+     D  +            E 
Sbjct: 123 KYINQ-----------LLTKVKKYLDNNTLILGDFNLALSILDRSSKQNISK------ET 165

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R     L+ M FTD  R  H     Y+F+     ++S     RIDHI+      +     
Sbjct: 166 RALNDTLEQMDFTDIYRTLHPNSTEYTFFSSAHGTFS-----RIDHILGHKSGLNRYQKI 220

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
            I          SDH  + + L+    +K  + S +  ++ I
Sbjct: 221 GIVPCI-----FSDHNALKLELN--HNKKFGRTSNTWRLRTI 255


>gi|73981671|ref|XP_848422.1| PREDICTED: similar to LINE-1 reverse transcriptase homolog isoform
           2 [Canis familiaris]
          Length = 1275

 Score = 81.8 bits (200), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 61/282 (21%), Positives = 101/282 (35%), Gaps = 34/282 (12%)

Query: 2   SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           S +++ T NVN +   I    ++ WIK+ +P I CLQET    K+     ++       +
Sbjct: 6   SYLSIVTLNVNGLNDPIKRRRVSDWIKKQDPSICCLQETHFRQKDTYSLKIKGWRTIYHS 65

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            G +   GVAIL   +             D +  +I    +I  + L I N+Y P+    
Sbjct: 66  NGPQKKAGVAILISDKLKFTPK---TVVRDEEGHYIILKGSIQQEDLTILNIYAPNVGAA 122

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                                +  L+   +  GD+N+     D  +            E 
Sbjct: 123 KYINQ-----------LLTKVKKYLDNNTLILGDFNLALSILDRSSKQNISK------ET 165

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R     L  M FTD  R  H     Y+F+     ++S     RIDHI+      +     
Sbjct: 166 RALNDTLDQMDFTDIYRTLHPNSTEYTFFSSAHGTFS-----RIDHILGHKSGLNRYQKI 220

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
            I          SDH  + + L+    +K  + S +  ++ I
Sbjct: 221 GIVPCI-----FSDHNALKLELN--HNKKFGRTSNTWRLRTI 255


>gi|290969210|ref|ZP_06560735.1| putative exodeoxyribonuclease III [Megasphaera genomosp. type_1
           str. 28L]
 gi|290780716|gb|EFD93319.1| putative exodeoxyribonuclease III [Megasphaera genomosp. type_1
           str. 28L]
          Length = 144

 Score = 81.8 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 49/135 (36%), Gaps = 7/135 (5%)

Query: 4   VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +   +WNVN +RA +           + D  CLQETK +        L     +     +
Sbjct: 1   MNCISWNVNGLRAVMKKGFMDVFTALDADFFCLQETKLQAGQIEMN-LPGYYQYWNYADR 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           K Y+G AI +K++P+ +   L  D  D + R I   +                 +     
Sbjct: 60  KGYSGTAIFTKHRPLAVTYGLGIDRHDHEGRLITLEYPT-----YYLITCYTPNSQNELA 114

Query: 123 KYDDKISWIKRFLRF 137
           +   +++W      +
Sbjct: 115 RLPYRLTWEDDCRNY 129


>gi|67606491|ref|XP_666752.1| dna-(apurinic or apyrimidinic site) lyase [Cryptosporidium hominis
           TU502]
 gi|54657802|gb|EAL36520.1| dna-(apurinic or apyrimidinic site) lyase [Cryptosporidium hominis]
          Length = 498

 Score = 81.8 bits (200), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 36/115 (31%), Gaps = 10/115 (8%)

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
            A   +                       T++ Y+ W     S  +N+G RID  ++S  
Sbjct: 286 KAYMHMRRMNIEMIKGYCLVDAYRHYYPRTNNKYTCWSQMNQSRIRNQGTRIDLFLVSKG 345

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIV-----SLD-IPEPRKKQQDSTSQNMKP 280
             S      I     G    SDH P+++       + +    K++  S      P
Sbjct: 346 LISESIKCEILDHIYG----SDHCPILLILKTGEFESLYNNEKRKPPSICSKYLP 396


>gi|73981669|ref|XP_856017.1| PREDICTED: similar to LINE-1 reverse transcriptase homolog isoform
           4 [Canis familiaris]
          Length = 1252

 Score = 81.4 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 61/282 (21%), Positives = 101/282 (35%), Gaps = 34/282 (12%)

Query: 2   SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           S +++ T NVN +   I    ++ WIK+ +P I CLQET    K+     ++       +
Sbjct: 6   SYLSIVTLNVNGLNDPIKRRRVSDWIKKQDPSICCLQETHFRQKDTYSLKIKGWRTIYHS 65

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            G +   GVAIL   +             D +  +I    +I  + L I N+Y P+    
Sbjct: 66  NGPQKKAGVAILISDKLKFTPK---TVVRDEEGHYIILKGSIQQEDLTILNIYAPNVGAA 122

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                                +  L+   +  GD+N+     D  +            E 
Sbjct: 123 KYINQ-----------LLTKVKKYLDNNTLILGDFNLALSILDRSSKQNISK------ET 165

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R     L  M FTD  R  H     Y+F+     ++S     RIDHI+      +     
Sbjct: 166 RALNDTLDQMDFTDIYRTLHPNSTEYTFFSSAHGTFS-----RIDHILGHKSGLNRYQKI 220

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
            I          SDH  + + L+    +K  + S +  ++ I
Sbjct: 221 GIVPCI-----FSDHNALKLELN--HNKKFGRTSNTWRLRTI 255


>gi|149002137|ref|ZP_01827091.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP14-BS69]
 gi|147759946|gb|EDK66936.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP14-BS69]
          Length = 245

 Score = 81.4 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 47/240 (19%), Positives = 80/240 (33%), Gaps = 23/240 (9%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDK-------NFP 46
           + + +WN++S+ A +            +   +   N DII +QETK   K          
Sbjct: 1   MKLISWNIDSLNAALTSDSARAKLSQEVLQTLVAENADIIAIQETKLSAKGPTKKHVEIL 60

Query: 47  FETLQSLN--YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
            E        +       +      +    + +      P               T+   
Sbjct: 61  EELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAPSTMDLEGRIITLEFD 120

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
              +  +Y P+         + ++             L+ E+P++  GDYN+     D  
Sbjct: 121 AFFVTQVYTPNAGDGLKRLEERQVWD--AKYAEYLAELDKEKPVLATGDYNVAHNEIDLA 178

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRI 223
           NP        FT E R  F  L   GFTD  R  H D    Y++W   + + SKN+  R+
Sbjct: 179 NPASNRRSPGFTDEERAGFTNLLATGFTDTFRHVHGDVPERYTWWAQRSKT-SKNQQYRL 237


>gi|307702382|ref|ZP_07639339.1| exodeoxyribonuclease [Streptococcus oralis ATCC 35037]
 gi|307624059|gb|EFO03039.1| exodeoxyribonuclease [Streptococcus oralis ATCC 35037]
          Length = 219

 Score = 81.4 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 45/224 (20%), Positives = 80/224 (35%), Gaps = 12/224 (5%)

Query: 45  FPFETLQSLN--YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN 102
              E        +       +      +    + +      P               T+ 
Sbjct: 3   ILEELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAPSTMDLEGRIITLE 62

Query: 103 TQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD 162
            +   +  +Y P+         + ++  +K        +L+ E+P++  GDYN+  +  D
Sbjct: 63  FEEFFVTQVYTPNAGDGLKRLEERQVWDVK--YAEYLAQLDKEKPVLATGDYNVAHKEID 120

Query: 163 CYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKG 220
             NP        FT E R  F  L   GFTD  R  H D    Y++W   +  S   N G
Sbjct: 121 LANPASNRRSPGFTDEERAGFTNLLATGFTDTFRHLHGDVPECYTWWAQRSKTSKINNTG 180

Query: 221 IRIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
            RID+ + S      +  +  ID+  R      DHTP+++ +++
Sbjct: 181 WRIDYWLTSNRVADKVTKSDMIDSGARQ-----DHTPIVLEIEL 219


>gi|331009393|gb|EGH89449.1| exodeoxyribonuclease III [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 163

 Score = 81.4 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 39/166 (23%), Positives = 70/166 (42%), Gaps = 8/166 (4%)

Query: 4   VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC-- 60
           + + + NVN I+A +   L +W++  N D+ICLQ+T+           Q   Y +  C  
Sbjct: 1   MRIISVNVNGIQAAVEGGLLSWLQAQNADVICLQDTRASTFELDDPAFQLDGYFLYACEA 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
              +  GVA+ S+ QP  +++ L  +  D   R+++A F      + I  L  P G    
Sbjct: 61  EVPAQGGVALYSRLQPKAVISGLGFETADRYGRYLQADFD----KVSIATLLFPSG-MNG 115

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
               + K   +  F ++  ++       I+ G   +  Q  D  N 
Sbjct: 116 DEDLNQKFKLMDDFGKYMDKQRRKRREYIYCGSLYVAQQKLDIKNW 161


>gi|152149539|pdb|2V0S|A Chain A, Crystal Structure Of A Hairpin Exchange Variant (Lr1) Of
           The Targeting Line-1 Retrotransposon Endonuclease
          Length = 236

 Score = 81.4 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 57/262 (21%), Positives = 94/262 (35%), Gaps = 34/262 (12%)

Query: 2   SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           S +T+ T N+N + + I    LA+WIK  +P + C+QET    ++     ++      + 
Sbjct: 6   SHITILTLNINGLNSAIKRHRLASWIKSQDPSVCCIQETHLTCRDTHRLKIKGWRKIYQA 65

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            G++   GVAIL   +     T       D +  +I    +I  + L I N+Y P+    
Sbjct: 66  NGKQKKAGVAILVSDKTDFKPT---KIKRDKEGHYIMVKGSIQQEELTILNIYAPNTGAP 122

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K              +  + +L+   +  GD+N      D         D       
Sbjct: 123 RFIKQ-----------VLSDLQRDLDSHTLIMGDFNTPLSTLDRSTRQKVNKDT------ 165

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           ++    L      D  R  H     Y+F     +S        IDHI+ S    S     
Sbjct: 166 QELNSALHQADLIDIYRTLHPKSTEYTFSTANGESK-------IDHIVGSKALLSKCKRT 218

Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261
            I T        SDH+ + + L
Sbjct: 219 EIITNYL-----SDHSAIKLEL 235


>gi|291533504|emb|CBL06617.1| Exonuclease III [Megamonas hypermegale ART12/1]
          Length = 70

 Score = 81.4 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 1/54 (1%)

Query: 4  VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56
          +   +WNVN +RA +        +  + DI CLQETK +      +  +   Y 
Sbjct: 1  MKFVSWNVNGLRACMNKGFMETFQTLDADIFCLQETKMQPHQLELDLPEYKQYW 54


>gi|73981667|ref|XP_855978.1| PREDICTED: similar to LINE-1 reverse transcriptase homolog isoform
           3 [Canis familiaris]
          Length = 1240

 Score = 81.4 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 61/282 (21%), Positives = 101/282 (35%), Gaps = 34/282 (12%)

Query: 2   SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           S +++ T NVN +   I    ++ WIK+ +P I CLQET    K+     ++       +
Sbjct: 6   SYLSIVTLNVNGLNDPIKRRRVSDWIKKQDPSICCLQETHFRQKDTYSLKIKGWRTIYHS 65

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            G +   GVAIL   +             D +  +I    +I  + L I N+Y P+    
Sbjct: 66  NGPQKKAGVAILISDKLKFTPK---TVVRDEEGHYIILKGSIQQEDLTILNIYAPNVGAA 122

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                                +  L+   +  GD+N+     D  +            E 
Sbjct: 123 KYINQ-----------LLTKVKKYLDNNTLILGDFNLALSILDRSSKQNISK------ET 165

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R     L  M FTD  R  H     Y+F+     ++S     RIDHI+      +     
Sbjct: 166 RALNDTLDQMDFTDIYRTLHPNSTEYTFFSSAHGTFS-----RIDHILGHKSGLNRYQKI 220

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
            I          SDH  + + L+    +K  + S +  ++ I
Sbjct: 221 GIVPCI-----FSDHNALKLELN--HNKKFGRTSNTWRLRTI 255


>gi|171780197|ref|ZP_02921101.1| hypothetical protein STRINF_01985 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281545|gb|EDT46980.1| hypothetical protein STRINF_01985 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 168

 Score = 81.4 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 41/136 (30%), Positives = 61/136 (44%), Gaps = 8/136 (5%)

Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG 190
                      L+ ++P++  GDYN+  Q  D  NP      A FT E R  F  L   G
Sbjct: 38  WDEKYAQYLAELDQKKPVLATGDYNVAHQEIDLANPNSNRRSAGFTDEERAGFTNLLAKG 97

Query: 191 FTDAIRATHDT-HHLYSFWDYYAD-SWSKNKGIRIDHIMLSPEATSLLHSAR-IDTKPRG 247
           FTD  R  H    ++YS+W   +  S   N G RID+ + S      +  +  ID+  R 
Sbjct: 98  FTDTFRHLHGNIPNVYSWWAQRSKTSKINNTGWRIDYWLTSNRIADKVTKSEMIDSGARQ 157

Query: 248 WTKPSDHTPVIVSLDI 263
                DHTP+++ +D+
Sbjct: 158 -----DHTPILLEIDL 168


>gi|2981631|dbj|BAA25253.1| unnamed protein product [Canis lupus familiaris]
          Length = 1275

 Score = 81.4 bits (199), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 61/282 (21%), Positives = 101/282 (35%), Gaps = 34/282 (12%)

Query: 2   SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           S +++ T NVN +   I    ++ WIK+ +P I CLQET    K+     ++       +
Sbjct: 6   SYLSIVTLNVNGLNDPIKRRRVSDWIKKQDPSICCLQETHFRQKDTYSLKIKGWRTIYHS 65

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            G +   GVAIL   +             D +  +I    +I  + L I N+Y P+    
Sbjct: 66  NGPQKKAGVAILISDKLKFTPK---TVVRDEEGHYIILKGSIQQEDLTILNIYAPNVGAA 122

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                                +  L+   +  GD+N+     D  +            E 
Sbjct: 123 KYINQ-----------LLTKVKKYLDNNTLILGDFNLALSILDRSSKHNISK------ET 165

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R     L  M FTD  R  H     Y+F+     ++S     RIDHI+      +     
Sbjct: 166 RALNDTLDQMDFTDIYRTLHPNSTEYTFFSSAHGTFS-----RIDHILGHQSGLNRYQKI 220

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
            I          SDH  + + L+    +K  + S +  ++ I
Sbjct: 221 GIVPCI-----FSDHNALKLELN--HNKKFGRTSNTWRLRTI 255


>gi|73963495|ref|XP_853568.1| PREDICTED: similar to LINE-1 reverse transcriptase homolog [Canis
           familiaris]
          Length = 1275

 Score = 81.0 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 54/282 (19%), Positives = 93/282 (32%), Gaps = 34/282 (12%)

Query: 2   SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           S +++ T NVN +   I    ++ WIK+ +P I CLQET    K+     ++       +
Sbjct: 6   SYLSIVTLNVNGLNDPIKRRRVSDWIKKQDPSICCLQETHFRQKDTYSLKIKGWRTIYHS 65

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            G +   GVAIL   +                              + +          I
Sbjct: 66  NGPQKKAGVAILISDKLKFTPK--------------TVVRDEEGHYIILKGSIQQEDLTI 111

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
            +    +  +           +  L+   +  GD+N+     D  +            E 
Sbjct: 112 LNIYAPNVGAAKYINRLLTKVKKYLDNNTLILGDFNLALSILDRSSKQNISK------ET 165

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R     L  M FTD  R  H     Y+F+     ++S     RIDHI+      +     
Sbjct: 166 RALNDTLDQMDFTDIYRTLHPNSTEYTFFSSAHGTFS-----RIDHILGHKSGLNRYQKI 220

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
            I          SDH  + + L+    +K  + S +  ++ I
Sbjct: 221 GIVPCI-----FSDHNALKLELN--HNKKFGRTSNTWRLRTI 255


>gi|182412613|ref|YP_001817679.1| endonuclease/exonuclease/phosphatase [Opitutus terrae PB90-1]
 gi|177839827|gb|ACB74079.1| Endonuclease/exonuclease/phosphatase [Opitutus terrae PB90-1]
          Length = 808

 Score = 81.0 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 52/291 (17%), Positives = 92/291 (31%), Gaps = 55/291 (18%)

Query: 4   VTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQET-----KTEDKNFPFETLQSL 53
           + + T+NV+       R     +A  I  + PD++ LQE      ++  ++        L
Sbjct: 555 LRLMTYNVHGCSGMDGRVSPRRVARVIAAHGPDLVALQEIDLGRRRSRAEDQAALIAHQL 614

Query: 54  NYHIETCGQ----KSYNGVAILSKYQPIEIVT----HLPGDDLDVQARFIEATFTINTQT 105
             H+  C      + + G A+LS++    +      H P          + A   I    
Sbjct: 615 GLHMVFCPTVTRGQEHYGHALLSRWPIEVVKRKLLPHDPRGWWKEPRAALWARVWIGDTP 674

Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165
           + +   +L  G        +  +             L  +E ++  GD+N+ P       
Sbjct: 675 VHVVTTHLGLGRR------ERLLQMKMLLSPEWLGGLRDDERVVLCGDFNLTPG------ 722

Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225
                           +   L      DA  A      L +F             +R+DH
Sbjct: 723 ---------------SAPYGLMANRLQDAQAARDGHRPLSTFSSNRPF-------VRLDH 760

Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQ 276
           I +SP     +   R+          SDH P+IV L +     +    TS 
Sbjct: 761 IFISPHF--RVQDVRVPRSELTRV-ASDHLPLIVDLALAPAAAETPTRTSP 808


>gi|92111129|gb|ABE73456.1| endonuclease/reverse transcriptase [Pan troglodytes]
          Length = 1275

 Score = 81.0 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 62/279 (22%), Positives = 104/279 (37%), Gaps = 33/279 (11%)

Query: 2   SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           S +T+ T NVN + + I    LA+WIK  +P + C+QET    ++     ++      + 
Sbjct: 6   SHITILTLNVNGLNSPIKRHRLASWIKSQDPSVCCIQETHLTCRDTHRLKIKGWRKIYQA 65

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            G++   GVAIL   +     T       D +  +I    +I  + L I N+Y P+    
Sbjct: 66  NGKQKRAGVAILVSDKTDFKPT---KIKRDKEGHYIMVKGSIQQEELTILNIYAPNTGAP 122

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K              +  + +L+   +  GD+   P      +     N      + 
Sbjct: 123 RFIKQ-----------VLSDLQRDLDSHTLIMGDFLNTPLSTLDRSTRQKVNK-----DT 166

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           ++    L      D  R  H     Y+F+     ++SK     IDHI+ S    S     
Sbjct: 167 QELNSALHQADLIDIYRTLHPKSTEYTFFSAPHHTYSK-----IDHILGSKALLSKCKRT 221

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278
            I T        SDH+ + + L I      Q  ST+  +
Sbjct: 222 EIITNYL-----SDHSAIKLVLRI--KNLTQSCSTTWKL 253


>gi|224007765|ref|XP_002292842.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220971704|gb|EED90038.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 193

 Score = 81.0 bits (198), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/161 (22%), Positives = 63/161 (39%), Gaps = 14/161 (8%)

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP--IIWE 170
              G  +    Y           +      + ++P+I+ GD N+     D +N       
Sbjct: 35  PNSGQKLERLGYRTNSWDKDFLTKMQQLEKDGDKPIIWVGDLNVAFDEKDTWNEGAKHLA 94

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLS 229
             A  T E R SF +    G+ DA R  H      YS+W   A +   NKG+R+D+ + S
Sbjct: 95  KSAGTTAEERASFAEQLGAGYIDAFRHLHPEGRGHYSYWSQRAGNREPNKGLRLDYFVCS 154

Query: 230 PEA-------TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                      +++  + +     G    SDH P+++ ++I
Sbjct: 155 KGIMGDGDGTKAIVRDSYMVPDQLG----SDHCPIVLEIEI 191


>gi|321479408|gb|EFX90364.1| hypothetical protein DAPPUDRAFT_309679 [Daphnia pulex]
          Length = 132

 Score = 80.6 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/119 (32%), Positives = 61/119 (51%), Gaps = 6/119 (5%)

Query: 142 LELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL-QNMGFTDAIRATHD 200
           L+ ++P+I  GD N+  Q  D  NP   + +A FT E R  F +L +++  TD  R  + 
Sbjct: 13  LDSKKPVIICGDMNVAHQEIDIANPKSNKRNAGFTQEERDGFSELLKSVNLTDGFRHKNP 72

Query: 201 T-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVI 258
                Y+FW Y A++  KN G R+D+ +LS + +S         +  G    SDH PV+
Sbjct: 73  DVKGAYTFWTYMANARKKNIGWRLDYCLLSEKLSSNFCDCCHRHEVYG----SDHCPVV 127


>gi|62085796|gb|AAX63289.1| DNA lyase [Beauveria bassiana]
          Length = 579

 Score = 80.6 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 5/70 (7%)

Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
            D  R  H T   +Y+ WD   ++   N G RID+I+ S    S    + I     G   
Sbjct: 228 WDICRCFHPTRLGMYTCWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQEGLMG--- 284

Query: 251 PSDHTPVIVS 260
            SDH PV  +
Sbjct: 285 -SDHCPVYAT 293



 Score = 40.9 bits (94), Expect = 0.22,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 22/60 (36%)

Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80
            A       DI+ +QETK + K+   + +    + +     +   G + ++ Y      
Sbjct: 2  FQAMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATC 61


>gi|326789162|ref|YP_004306983.1| endonuclease/exonuclease/phosphatase [Clostridium lentocellum DSM
           5427]
 gi|326539926|gb|ADZ81785.1| Endonuclease/exonuclease/phosphatase [Clostridium lentocellum DSM
           5427]
          Length = 257

 Score = 80.6 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/280 (15%), Positives = 79/280 (28%), Gaps = 43/280 (15%)

Query: 4   VTVATWNV--NSI-------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           + V ++NV  +SI       R R   +   IK+ + D++ LQE    D+ +         
Sbjct: 1   MKVMSFNVRADSILDVRNRWRHRSEIVYEVIKKYDCDVVGLQEV--TDRMYMDLNKAIDG 58

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           Y+I   G+                        +        E    +  +T  +      
Sbjct: 59  YYIIGKGRTKRY-------------------FNERNNLLVKEDYNLLEEETFWLSKTPSK 99

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG-----------DYNIIPQPHDC 163
            G+ +  + +    +     L    +       L                  +       
Sbjct: 100 TGSSVWYSMFPRICTTAVIQLANNLKIRIYNTHLDCLLPSAREYGLKKIGEYVGECYQKE 159

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223
             P I   D     + +   Q  Q         A  D                K +G+ I
Sbjct: 160 KLPCILMGDFNAGPQSKLIQQFSQGSYSDKRFIAVQDVRKEIYNEATMGHFKGKTRGLHI 219

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           D+I +S E    +    I    +    PSDH P++  +++
Sbjct: 220 DYIFVSEEFE--IKDVEIIKYQKNNKYPSDHYPILAEINL 257


>gi|66356394|ref|XP_625375.1| hypothetical protein [Cryptosporidium parvum Iowa II]
 gi|46226387|gb|EAK87392.1| conserved hypothetical protein [Cryptosporidium parvum Iowa II]
          Length = 500

 Score = 80.6 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 36/115 (31%), Gaps = 10/115 (8%)

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
            A   +                       T++ Y+ W     S  +N+G RID  ++S  
Sbjct: 286 KAYMHMRRMNIEMIKGYCLVDAYRHYYPRTNNKYTCWSQMNQSRIRNQGTRIDLFLISKG 345

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIV-----SLD-IPEPRKKQQDSTSQNMKP 280
             S      I     G    SDH P+++       + +    K++  S      P
Sbjct: 346 LISESIKCEILDHIYG----SDHCPILLILKTGEFESLYNNEKRKPPSICSKYLP 396


>gi|325128862|gb|EGC51720.1| putative exodeoxyribonuclease [Neisseria meningitidis N1568]
          Length = 59

 Score = 80.6 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 20/56 (35%), Positives = 31/56 (55%)

Query: 4  VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
          + + TWNVNS+  R+  +   + +N PDI+ LQE K +   FP   LQ + +H   
Sbjct: 1  MKITTWNVNSLNVRLPQVQNLLADNPPDILVLQELKLDQDKFPAAALQMMGWHCVW 56


>gi|331658475|ref|ZP_08359422.1| exodeoxyribonuclease III [Escherichia coli TA206]
 gi|331054411|gb|EGI26435.1| exodeoxyribonuclease III [Escherichia coli TA206]
          Length = 46

 Score = 80.6 bits (197), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 18/44 (40%), Positives = 29/44 (65%)

Query: 2  SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNF 45
          + +   ++N+N +RAR H L A ++++ PD+I LQETK  D  F
Sbjct: 3  ATMKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMF 46


>gi|42476373|gb|AAS16530.1| exodeoxyribonuclease III [Neisseria gonorrhoeae]
          Length = 53

 Score = 80.2 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 20/53 (37%), Positives = 31/53 (58%)

Query: 4  VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56
          + + TWNVNS+  R+  +   + +N PDI+ LQE K +   FP   LQ + +H
Sbjct: 1  MKITTWNVNSLNVRLPQVQNLLADNPPDILVLQELKLDQDKFPAAALQMMGWH 53


>gi|39971027|ref|XP_366904.1| hypothetical protein MGG_02980 [Magnaporthe oryzae 70-15]
 gi|149210567|ref|XP_001522658.1| hypothetical protein MGCH7_ch7g758 [Magnaporthe oryzae 70-15]
 gi|86196713|gb|EAQ71351.1| hypothetical protein MGCH7_ch7g758 [Magnaporthe oryzae 70-15]
 gi|145017186|gb|EDK01549.1| hypothetical protein MGG_02980 [Magnaporthe oryzae 70-15]
          Length = 626

 Score = 80.2 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 45/297 (15%), Positives = 84/297 (28%), Gaps = 63/297 (21%)

Query: 21  LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN---YHIETCGQKSYNGVAILSKYQPI 77
           +   ++    DI+ +QE K + K+   + +       Y      +K Y+GVAI ++    
Sbjct: 1   MFDILE---ADIVVIQEAKIQRKDLQDDMVLVPGWDVYFSLPKFKKGYSGVAIYTRSSKC 57

Query: 78  EIVTHLPGD--DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYD---------- 125
             +    G    L       +       Q +          + I     D          
Sbjct: 58  SPIRAEEGITGILCPPNSTTKFRELSPDQQIGGYPRPDQLSDIIDEATLDSEGRCMILEF 117

Query: 126 --------------------DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165
                                + ++ K         + + + ++  GD NII    D   
Sbjct: 118 PAFVLIGVYSPATRDETRTDFRQAFHKAMDARVRNLVAMGKQVVLTGDLNIIRNELDTAG 177

Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTD---------------------AIRATHDTHHL 204
            +        T++   S    + +                               D   +
Sbjct: 178 ILERLRKEEMTIDEFFSTPSRRFLNHMVFGGTVVGGRDEGREEPVMYDLGREFHPDRIGM 237

Query: 205 YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           Y+ W+   ++   N G RID+++ S         A I     G    SDH PV  +L
Sbjct: 238 YTCWETRKNARPGNFGSRIDYVLCSAGMKDWFIDANIQEGLLG----SDHCPVYATL 290


>gi|325104253|ref|YP_004273907.1| Endonuclease/exonuclease/phosphatase [Pedobacter saltans DSM 12145]
 gi|324973101|gb|ADY52085.1| Endonuclease/exonuclease/phosphatase [Pedobacter saltans DSM 12145]
          Length = 276

 Score = 80.2 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 47/281 (16%), Positives = 93/281 (33%), Gaps = 39/281 (13%)

Query: 2   SVVTVATWNV-NSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETL----QSLN 54
             + + ++N+   ++ +         +     D++ LQE      +F  ET     Q L+
Sbjct: 14  RSLKILSYNILEGLKDKEKRALFVRLVDSLQADVLTLQEC----NHFTHETFLKFAQELS 69

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           Y      ++      I+SKY    +     G               ++         Y  
Sbjct: 70  YPYAVLLKEKGYPPGIISKYPIENVQRITEGF--------------LHGYISAEIAGYQF 115

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
               +    Y  + + ++  +R   Q  +  + +I     ++ PQ    YNP   + D  
Sbjct: 116 VNLHLNPFMYVKRNAEMEAVIRHLDQLPKNSKTIIMGDFNSLSPQDSSYYNPNKQKLDKL 175

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYS-FWDYYADSW------------SKNKGI 221
              E  ++  +  N G  D    +   +  Y+  W Y   S               +  +
Sbjct: 176 IAHEATRAHIQNVNNGGFDYSVISQLINKGYTDAWKYKNKSRFEKSAPSPVVKHDPDNDV 235

Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
           RID+I +S    S + S  +          SDH P+++ L 
Sbjct: 236 RIDYIWVSTPLKSKIKSVFMIKNK-HTDIISDHYPLVLVLK 275


>gi|66734174|gb|AAY53484.1| endonuclease reverse transcriptase [Bos taurus]
          Length = 1272

 Score = 80.2 bits (196), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 59/283 (20%), Positives = 100/283 (35%), Gaps = 37/283 (13%)

Query: 1   MSV---VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55
           M+    ++V T NVN + A  +   LA WI++ +P I CLQET  +  +     ++    
Sbjct: 1   MATGTYLSVITLNVNGLNAPTKRQRLAEWIQKQDPYICCLQETHLKTGDTYRLKVKGWKK 60

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
                  +   GVAIL   +   I         D +  +I    +I  + + I N+Y P+
Sbjct: 61  IFHANRDQKKAGVAILISDK---IDFKTKAVKRDKEGHYIMIKGSIQEEEITIINIYAPN 117

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
                  +               S + E+    I  GD+N    P D             
Sbjct: 118 TGAPQYVRQ-----------MLTSMKGEINNNTIIVGDFNTPLTPMDRSTKQKINK---- 162

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
             E +     +  +   D  R+ H     ++F+     ++S     RIDHI+    +   
Sbjct: 163 --ETQTLNDTIDQLDLIDIYRSFHPKTMNFTFFSSAHGTFS-----RIDHILGHKASLGK 215

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278
                I          SDH  V + L+    RK  ++S    +
Sbjct: 216 FKKIEIIPSI-----FSDHNAVRLDLN--YRRKTIKNSNIWRL 251


>gi|218290200|ref|ZP_03494359.1| exodeoxyribonuclease III [Alicyclobacillus acidocaldarius LAA1]
 gi|218239795|gb|EED06985.1| exodeoxyribonuclease III [Alicyclobacillus acidocaldarius LAA1]
          Length = 58

 Score = 79.8 bits (195), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 24/52 (46%), Gaps = 2/52 (3%)

Query: 4  VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
          +   +WNVN +RA +       + +  + D+ C+QETK +         ++ 
Sbjct: 1  MRFVSWNVNGLRACVKKGAFLPYFESADADVFCIQETKLQAGQIELPIGEAY 52


>gi|148645276|gb|ABR01162.1| endonuclease/reverse transcriptase [Sus scrofa]
          Length = 1272

 Score = 79.8 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 54/279 (19%), Positives = 95/279 (34%), Gaps = 34/279 (12%)

Query: 2   SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           + +++ T NVN + A I    +A WIK   P I CLQET    K+     ++        
Sbjct: 5   NHLSIITLNVNGLNAPIKRHRVAEWIKRQKPSICCLQETHLRTKDTYRLKVKGWGKVFHA 64

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
                  GVA L   +       +     D +  ++    +I  + + I N+Y P+    
Sbjct: 65  NRHDRKAGVATLISDKIDFKTKDIKK---DKEGHYLMIKGSIQGEDVTIINIYAPNIGAP 121

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +                 + +++E  I  GD N      D  +            E 
Sbjct: 122 RYIQQ-----------ILTDIKGDIDENTIIVGDLNTPLTSMDRSSRQKTNKATEILKET 170

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
            +       +   D  R  H     Y+F+     ++S     RIDHI+      +   S 
Sbjct: 171 IEK------LDLIDIFRTLHPKKSEYTFFSNAHGTFS-----RIDHILGHKANLNKFRSI 219

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278
            I +         DH    + L+I   ++K++  T   +
Sbjct: 220 EIISSIFS-----DHNA--MKLEINHGKRKEKKPTPWRL 251


>gi|73974662|ref|XP_848463.1| PREDICTED: similar to LINE-1 reverse transcriptase homolog [Canis
           familiaris]
          Length = 1272

 Score = 79.8 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 60/282 (21%), Positives = 100/282 (35%), Gaps = 34/282 (12%)

Query: 2   SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           S +++ T NVN +   I    ++ WIK+ +P I CLQET     +     ++       +
Sbjct: 5   SYLSIVTLNVNGLNDPIKRRRVSDWIKKQDPSICCLQETHFRQMDTYSLKMKDWRTIYHS 64

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            G +   GVAIL   +             D +  +I    +I  + L I N+Y P+    
Sbjct: 65  NGPQKKAGVAILISDKLKFTPK---TVVRDEEGHYIILKGSIQQEDLTILNIYAPNVGTA 121

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                                +  L+   +  GD+N+     D  +            E 
Sbjct: 122 KYINQ-----------LLTKVKKYLDNNTLILGDFNLALSILDRSSKHNISK------ET 164

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R     L  M FTD  R  H     Y+F+     ++S     RIDHI+      +     
Sbjct: 165 RALNDTLDQMDFTDIYRTLHPNSTEYTFFSSAHGTFS-----RIDHILGHKSGLNRYQKI 219

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
            I          SDH  + + L+    +K  + S +  ++ I
Sbjct: 220 GIVPCI-----FSDHNALKLELN--HNKKFGRTSNTWRLRTI 254


>gi|39722391|emb|CAE84424.1| DNA lyase [Yarrowia lipolytica]
          Length = 412

 Score = 79.8 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 38/97 (39%), Gaps = 6/97 (6%)

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             + + ++          +   +Y+ W+   +    N G RID+++ S      +  A I
Sbjct: 92  FHRLVPDLLQDSCRNKHPNRPDMYTCWNVMMNYRPGNFGSRIDYVLASKGL--KVEDADI 149

Query: 242 DTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278
                G    SDH PV   +  P+  +++ +  +Q  
Sbjct: 150 LPHLEG----SDHCPVYAEVREPDACQEKDNRATQGA 182


>gi|50548171|ref|XP_501555.1| YALI0C07436p [Yarrowia lipolytica]
 gi|49647422|emb|CAG81858.1| YALI0C07436p [Yarrowia lipolytica]
          Length = 582

 Score = 79.8 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 38/97 (39%), Gaps = 6/97 (6%)

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             + + ++          +   +Y+ W+   +    N G RID+++ S      +  A I
Sbjct: 262 FHRLVPDLLQDSCRNKHPNRPDMYTCWNVMMNYRPGNFGSRIDYVLASKGL--KVEDADI 319

Query: 242 DTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278
                G    SDH PV   +  P+  +++ +  +Q  
Sbjct: 320 LPHLEG----SDHCPVYAEVREPDACQEKDNRATQGA 352


>gi|73981665|ref|XP_537277.2| PREDICTED: similar to reverse transcriptase isoform 1 [Canis
           familiaris]
          Length = 1150

 Score = 79.8 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 61/282 (21%), Positives = 101/282 (35%), Gaps = 34/282 (12%)

Query: 2   SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           S +++ T NVN +   I    ++ WIK+ +P I CLQET    K+     ++       +
Sbjct: 6   SYLSIVTLNVNGLNDPIKRRRVSDWIKKQDPSICCLQETHFRQKDTYSLKIKGWRTIYHS 65

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            G +   GVAIL   +             D +  +I    +I  + L I N+Y P+    
Sbjct: 66  NGPQKKAGVAILISDKLKFTPK---TVVRDEEGHYIILKGSIQQEDLTILNIYAPNVGAA 122

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                                +  L+   +  GD+N+     D  +            E 
Sbjct: 123 KYINQ-----------LLTKVKKYLDNNTLILGDFNLALSILDRSSKQNISK------ET 165

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R     L  M FTD  R  H     Y+F+     ++S     RIDHI+      +     
Sbjct: 166 RALNDTLDQMDFTDIYRTLHPNSTEYTFFSSAHGTFS-----RIDHILGHKSGLNRYQKI 220

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
            I          SDH  + + L+    +K  + S +  ++ I
Sbjct: 221 GIVPCI-----FSDHNALKLELN--HNKKFGRTSNTWRLRTI 255


>gi|4335971|gb|AAD17542.1| APEX nuclease [Ateles belzebuth chamek]
          Length = 69

 Score = 79.8 bits (195), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 1/46 (2%)

Query: 2  SVVTVATWNVNSIRARIHN-LAAWIKENNPDIICLQETKTEDKNFP 46
          + + + +WNV+ +RA I      W+KE  PDI+CLQETK  +   P
Sbjct: 24 ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLP 69


>gi|309798809|ref|ZP_07693073.1| exodeoxyribonuclease III [Streptococcus infantis SK1302]
 gi|308117626|gb|EFO55038.1| exodeoxyribonuclease III [Streptococcus infantis SK1302]
          Length = 217

 Score = 79.4 bits (194), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 37/136 (27%), Positives = 60/136 (44%), Gaps = 8/136 (5%)

Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG 190
                     +L+ ++ ++  GDYN+  +  D  NP        FT E R+ F  L   G
Sbjct: 87  WDVKYAEYLAQLDKQKSVLATGDYNVAHKEIDLANPASNRRSPGFTDEEREGFSNLLAKG 146

Query: 191 FTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIRIDHIMLSPEATSLLHSAR-IDTKPRG 247
           FTD  R  H D    Y++W   +  S   N G RID+ + S      +  +  ID+  R 
Sbjct: 147 FTDTFRHIHGDVPERYTWWAQRSKTSKINNTGWRIDYWLTSNRVADKVTKSDMIDSGARQ 206

Query: 248 WTKPSDHTPVIVSLDI 263
                DHTP+++ +++
Sbjct: 207 -----DHTPIVMEIEL 217


>gi|111054099|gb|ABH04240.1| DNA lyase-like protein [Mycosphaerella fijiensis]
          Length = 622

 Score = 79.4 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 29/73 (39%), Gaps = 4/73 (5%)

Query: 190 GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT 249
            +        D   +Y+ WD   ++   N G RID +++S    S +    I     G  
Sbjct: 252 FWDTTRIFHPDRKGMYTHWDTKVNARPGNFGSRIDFVLVSEALRSWVKYGNIQEGLLG-- 309

Query: 250 KPSDHTPVIVSLD 262
             SDH PV +  +
Sbjct: 310 --SDHCPVYIDFE 320



 Score = 42.5 bits (98), Expect = 0.073,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 28/82 (34%), Gaps = 14/82 (17%)

Query: 10 NVNSIR----------AR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
          NVN IR          +R    +   ++    DI+ +QE K + K+   + +    +   
Sbjct: 4  NVNGIRNPFSYPPWNVSRTFSAMFDILES---DIVVMQELKIQRKDLRDDMVLVDGWDCY 60

Query: 59 TCGQKSYNGVAILSKYQPIEIV 80
              K   G + +  Y      
Sbjct: 61 FSLPKHKKGYSGVGIYTRNATC 82


>gi|45198534|ref|NP_985563.1| AFR016Wp [Ashbya gossypii ATCC 10895]
 gi|44984485|gb|AAS53387.1| AFR016Wp [Ashbya gossypii ATCC 10895]
          Length = 558

 Score = 79.4 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 4/84 (4%)

Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPS 252
                      +Y+ WD Y +S   N G R+D+I++S      +  A I  K  G    S
Sbjct: 320 TRYAQGRKRLKMYTVWDTYRNSRPANYGSRVDYILVSKALKEGVKKADIWAKVMG----S 375

Query: 253 DHTPVIVSLDIPEPRKKQQDSTSQ 276
           DH PV   L I E      + T++
Sbjct: 376 DHCPVFTDLQIEEEDTVALEETTK 399



 Score = 48.6 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/87 (18%), Positives = 29/87 (33%), Gaps = 16/87 (18%)

Query: 4   VTVATWNVNSIRA------------RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51
           +   T+NVN +R              +  +  + K    D+I  QE KT+    P   + 
Sbjct: 42  LRFVTFNVNGLRTLFGHYPFSRMSNSLAQVFEYFKS---DVITFQELKTDKLAIPRWGMV 98

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIE 78
              Y+          G + +  +  I 
Sbjct: 99  D-GYYSFITIPSKKKGYSGVGCWIRIP 124


>gi|325068217|ref|ZP_08126890.1| putative exodeoxyribonuclease III [Actinomyces oris K20]
          Length = 77

 Score = 79.4 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 4/61 (6%)

Query: 4  VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
          + +AT NVN IRA     +  W+  + PDI+ LQE +  D+    + L    Y       
Sbjct: 1  MRIATVNVNGIRAAARKGMGEWLAASAPDILLLQEVRA-DEQIAVDLLP--GYEAAIWPC 57

Query: 63 K 63
          +
Sbjct: 58 R 58


>gi|323349886|gb|EGA84099.1| Apn2p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 455

 Score = 79.4 bits (194), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 6/78 (7%)

Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
            +Y+ W+   +    N G RID I++S +    + +A I     G    SDH PV   LD
Sbjct: 307 KMYTVWNMLKNLRPSNYGSRIDFILVSLKLERCIKTADILPDILG----SDHCPVYSDLD 362

Query: 263 IPEPRKKQQDSTSQNMKP 280
           I     + +  T+Q   P
Sbjct: 363 I--VDDRIEPGTTQVAIP 378



 Score = 46.7 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 39/138 (28%), Gaps = 17/138 (12%)

Query: 2   SVVTVATWNVNSIRA------------RIHNLAAWIKENNPDIICLQETKTEDKNFPFET 49
           + +   T+NVN IR              + ++  + +    DII  QE KTE  +     
Sbjct: 15  NTIRFLTFNVNGIRTFFHYQPFSQMNQSLRSVFDFFR---ADIITFQELKTEKLSISKWG 71

Query: 50  LQSLNYHIETCGQKS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107
                Y   +  Q    Y+GV    +        +     +  +          N +   
Sbjct: 72  RVDGFYSFISIPQNRKGYSGVGCWIRIXEKNHPLYHALQVVKAEEGITGYLTIKNGKHSA 131

Query: 108 IGNLYLPHGNPITSTKYD 125
           I      +         D
Sbjct: 132 ISYRNDVNQGIGGYDSLD 149


>gi|256269259|gb|EEU04581.1| Apn2p [Saccharomyces cerevisiae JAY291]
 gi|259144827|emb|CAY77766.1| Apn2p [Saccharomyces cerevisiae EC1118]
          Length = 520

 Score = 79.4 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 6/78 (7%)

Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
            +Y+ W+   +    N G RID I++S +    + +A I     G    SDH PV   LD
Sbjct: 307 KMYTVWNMLKNLRPSNYGSRIDFILVSLKLERCIKTADILPDILG----SDHCPVYSDLD 362

Query: 263 IPEPRKKQQDSTSQNMKP 280
           I     + +  T+Q   P
Sbjct: 363 I--VDDRIEPGTTQVAIP 378



 Score = 47.1 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 39/138 (28%), Gaps = 17/138 (12%)

Query: 2   SVVTVATWNVNSIRA------------RIHNLAAWIKENNPDIICLQETKTEDKNFPFET 49
           + +   T+NVN IR              + ++  + +    DII  QE KTE  +     
Sbjct: 15  NTIRFLTFNVNGIRTFFHYQPFSQMNQSLRSVFDFFR---ADIITFQELKTEKLSISKWG 71

Query: 50  LQSLNYHIETCGQKS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107
                Y   +  Q    Y+GV    +        +     +  +          N +   
Sbjct: 72  RVDGFYSFISIPQNRKGYSGVGCWIRIPEKNHPLYHALQVVKAEEGITGYLTIKNGKHSA 131

Query: 108 IGNLYLPHGNPITSTKYD 125
           I      +         D
Sbjct: 132 ISYRNDVNQGIGGYDSLD 149


>gi|323356266|gb|EGA88070.1| Apn2p [Saccharomyces cerevisiae VL3]
          Length = 520

 Score = 79.4 bits (194), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 6/78 (7%)

Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
            +Y+ W+   +    N G RID I++S +    + +A I     G    SDH PV   LD
Sbjct: 307 KMYTVWNMLKNLRPSNYGSRIDFILVSLKLERCIKTADILPDILG----SDHCPVYSDLD 362

Query: 263 IPEPRKKQQDSTSQNMKP 280
           I     + +  T+Q   P
Sbjct: 363 I--VDDRIEPGTTQVAIP 378



 Score = 46.7 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 39/138 (28%), Gaps = 17/138 (12%)

Query: 2   SVVTVATWNVNSIRA------------RIHNLAAWIKENNPDIICLQETKTEDKNFPFET 49
           + +   T+NVN IR              + ++  + +    DII  QE KTE  +     
Sbjct: 15  NTIRFLTFNVNGIRTFFHYQPFSQMNQSLRSVFDFFR---ADIITFQELKTEKLSISKWG 71

Query: 50  LQSLNYHIETCGQKS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107
                Y   +  Q    Y+GV    +        +     +  +          N +   
Sbjct: 72  RVDGFYSFISIPQXRKGYSGVGCWIRIPEKNHPLYHALQVVKAEEGITGYLTIKNGKHSA 131

Query: 108 IGNLYLPHGNPITSTKYD 125
           I      +         D
Sbjct: 132 ISYRNDVNQGIGGYDSLD 149


>gi|224086920|ref|XP_002308005.1| predicted protein [Populus trichocarpa]
 gi|222853981|gb|EEE91528.1| predicted protein [Populus trichocarpa]
          Length = 331

 Score = 79.1 bits (193), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 25/98 (25%), Positives = 38/98 (38%), Gaps = 13/98 (13%)

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK-------GIRIDH 225
           AC   E +       + GF DA R  H     Y++W Y       NK       G R+D+
Sbjct: 238 ACTEEERKSFGSNFLSNGFVDAFRKQHPNVVGYTYWGYRHGGRKTNKVVLKFETGWRLDY 297

Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPV--IVSL 261
            ++S      +H + I     G     DH P+  ++ L
Sbjct: 298 FLVSESIADNVHDSYIVPAVTGG----DHCPLRPVLEL 331


>gi|323338805|gb|EGA80020.1| Apn2p [Saccharomyces cerevisiae Vin13]
          Length = 317

 Score = 79.1 bits (193), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 6/78 (7%)

Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
            +Y+ W+   +    N G RID I++S +    + +A I     G    SDH PV   LD
Sbjct: 182 KMYTVWNMLKNLRPSNYGSRIDFILVSLKLERCIKTADILPDILG----SDHCPVYSDLD 237

Query: 263 IPEPRKKQQDSTSQNMKP 280
           I     + +  T+Q   P
Sbjct: 238 I--VDDRIEPGTTQVAIP 253


>gi|148675568|gb|EDL07515.1| apurinic/apyrimidinic endonuclease 2, isoform CRA_c [Mus musculus]
          Length = 543

 Score = 79.1 bits (193), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 62/200 (31%), Gaps = 18/200 (9%)

Query: 93  RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG 152
           +    T     +TL + N+Y PH +P    +   K+ + +     A   L     +I  G
Sbjct: 163 QHKIRTLEGKEKTLTLINVYCPHADPGKPERLTFKMRFYRLLQMRAEALLAAGSHVIILG 222

Query: 153 DYNIIPQPHDCY-----------NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT 201
           D N   +P D                 W +                 M     +      
Sbjct: 223 DLNTAHRPIDHCDASSLECFEEDPGRKWMDGLLSNPGDEAGPHIGLFMDSYRYL--HPKQ 280

Query: 202 HHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT-SLLHSARIDTKPRGWTKPSDHTPVIVS 260
              ++ W   + +   N G R+D+++           ++ +  +  G    SDH PV   
Sbjct: 281 QRAFTCWSVVSGARHLNYGSRLDYVLGDRALVIDTFQASFLLPEVMG----SDHCPVGAV 336

Query: 261 LDIPEPRKKQQDSTSQNMKP 280
           L++     KQ  +      P
Sbjct: 337 LNVSCVPAKQCPALCTRFLP 356


>gi|148675567|gb|EDL07514.1| apurinic/apyrimidinic endonuclease 2, isoform CRA_b [Mus musculus]
          Length = 402

 Score = 79.1 bits (193), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 62/200 (31%), Gaps = 18/200 (9%)

Query: 93  RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG 152
           +    T     +TL + N+Y PH +P    +   K+ + +     A   L     +I  G
Sbjct: 22  QHKIRTLEGKEKTLTLINVYCPHADPGKPERLTFKMRFYRLLQMRAEALLAAGSHVIILG 81

Query: 153 DYNIIPQPHDCY-----------NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT 201
           D N   +P D                 W +                 M     +      
Sbjct: 82  DLNTAHRPIDHCDASSLECFEEDPGRKWMDGLLSNPGDEAGPHIGLFMDSYRYL--HPKQ 139

Query: 202 HHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT-SLLHSARIDTKPRGWTKPSDHTPVIVS 260
              ++ W   + +   N G R+D+++           ++ +  +  G    SDH PV   
Sbjct: 140 QRAFTCWSVVSGARHLNYGSRLDYVLGDRALVIDTFQASFLLPEVMG----SDHCPVGAV 195

Query: 261 LDIPEPRKKQQDSTSQNMKP 280
           L++     KQ  +      P
Sbjct: 196 LNVSCVPAKQCPALCTRFLP 215


>gi|149031346|gb|EDL86344.1| rCG38932, isoform CRA_b [Rattus norvegicus]
          Length = 346

 Score = 79.1 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 18/137 (13%), Positives = 39/137 (28%), Gaps = 9/137 (6%)

Query: 145 EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL 204
             P+      ++     D     +    +    E         +                
Sbjct: 31  HRPIDHCDASSLECFEEDPGRKWMDGLLSNPGNEAGPHIGHFMDSFRY----FHPKQQRA 86

Query: 205 YSFWDYYADSWSKNKGIRIDHIMLSPEAT-SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           ++ W   + +   N G R+D+++           ++ +  +  G    SDH PV   L++
Sbjct: 87  FTCWSVVSGARHLNYGSRLDYVLGDRSLVIDTFQASFLLPEVMG----SDHCPVGAVLNV 142

Query: 264 PEPRKKQQDSTSQNMKP 280
                KQ  +      P
Sbjct: 143 SCVPAKQCPALCTRFLP 159


>gi|302669280|ref|YP_003832430.1| exodeoxyribonuclease III Xth [Butyrivibrio proteoclasticus B316]
 gi|302396944|gb|ADL35848.1| exodeoxyribonuclease III Xth [Butyrivibrio proteoclasticus B316]
          Length = 216

 Score = 79.1 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 46/216 (21%), Positives = 80/216 (37%), Gaps = 10/216 (4%)

Query: 51  QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
               Y       +      +    + I++V   P               T+         
Sbjct: 8   HDYVYVSSREPARKGYAGTMALYKRDIKVVASFPEIGAPDTMDSEGRMITLEHDKFFFNL 67

Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170
           +Y P+         + +   ++       + L+  +P+I  GDYN+  +  D  NP    
Sbjct: 68  VYTPNAGDGLKRLKERQEWDVQ--YTKYLKSLDEVKPVISCGDYNVAHEEIDLANPDSNH 125

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIRIDHIML 228
             A FT E R  F  L + GF D  R  H D  ++YS+W      S   N G RID+ ++
Sbjct: 126 MSAGFTDEERAGFTNLLSAGFVDTFRHVHGDIPNVYSWWAQRIKTSKINNSGWRIDYFLV 185

Query: 229 SPEATSLLHSARI-DTKPRGWTKPSDHTPVIVSLDI 263
           S      +  + + D+  R      DHTP+ + +++
Sbjct: 186 SDRIKDKVTRSDMLDSGARQ-----DHTPIALEIEL 216


>gi|73975969|ref|XP_537276.2| PREDICTED: similar to LINE-1 reverse transcriptase homolog isoform
           1 [Canis familiaris]
          Length = 1273

 Score = 79.1 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 61/282 (21%), Positives = 101/282 (35%), Gaps = 36/282 (12%)

Query: 2   SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           S +++ T NVN +   I    ++ WIK+ +P I CLQET    K+     ++       +
Sbjct: 6   SYLSIVTLNVNGLNDPIKRRRVSDWIKKQDPSICCLQETHFRQKDTYSLKIKGWRTIYHS 65

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            G +   GVAIL   +             D +  +I    +I  + L I N+Y P+    
Sbjct: 66  NGPQKKAGVAILISDKLKFTPK---TVVRDEEGHYIILKGSIQQEDLTILNIYAPNVGAA 122

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                                +  L+   +  GD+N+     D  +            E 
Sbjct: 123 KYINQ-----------LLTKVKKYLDNNTLILGDFNLALSILDRSSKHNISK------ET 165

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R     L  M FTD  R  H     Y+F+     ++S     RIDHI+      +     
Sbjct: 166 RALNDTLDQMDFTDIYRTLHPNSTEYTFFS--HGTFS-----RIDHILGHKSGLNRYQKI 218

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
            I          SDH  + + L+    +K  + S +  ++ I
Sbjct: 219 GIVPCI-----FSDHNALKLELN--HNKKFGRTSNTWRLRTI 253


>gi|115402641|ref|XP_001217397.1| hypothetical protein ATEG_08811 [Aspergillus terreus NIH2624]
 gi|114189243|gb|EAU30943.1| hypothetical protein ATEG_08811 [Aspergillus terreus NIH2624]
          Length = 592

 Score = 79.1 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 27/72 (37%), Gaps = 4/72 (5%)

Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
                    D   +Y+ W+   ++   N G RID+++ S +    +  + I     G   
Sbjct: 225 HDICRMFHPDRKGMYTCWEQRINARPGNYGSRIDYVLCSLDMRDWIEDSNIQEGLMG--- 281

Query: 251 PSDHTPVIVSLD 262
            SDH PV     
Sbjct: 282 -SDHCPVYAIFK 292



 Score = 37.8 bits (86), Expect = 1.8,   Method: Composition-based stats.
 Identities = 7/35 (20%), Positives = 14/35 (40%)

Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           +    DI+  QETK + K+   + +    +    
Sbjct: 2  FEILEADIVVFQETKIQRKDLRDDMVLVPGWDCYF 36


>gi|74008029|ref|XP_851237.1| PREDICTED: similar to LINE-1 reverse transcriptase homolog [Canis
           familiaris]
          Length = 1275

 Score = 79.1 bits (193), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 59/282 (20%), Positives = 97/282 (34%), Gaps = 34/282 (12%)

Query: 2   SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           S +++ T NVN +   I    ++ WIK+ +P I CLQET    K+     ++        
Sbjct: 6   SYLSIVTLNVNGLNDPIKRRRVSDWIKKQDPSICCLQETHFRQKDTYSLKIKGWRTIYHL 65

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            G +   GVAIL   +             D +  +I    +I  + L I N+Y P+    
Sbjct: 66  NGPQKKAGVAILISDKLKFTPK---TVVRDEEGHYIILKGSIQQEDLTILNIYAPNVGAA 122

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                                +  L+   +  GD+N+     D  +              
Sbjct: 123 KYINQ-----------LLTKVKKYLDNNTLILGDFNLALSILDRSSKHNISKKTR----- 166

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
                 L  M FTD  R  H     Y+F+     ++S     RIDHI       +     
Sbjct: 167 -ALNDTLDQMDFTDIERTLHPNSTEYTFFSSAHGTFS-----RIDHIFGHKSGLNRYQKI 220

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
            I          SDH  + + L+    +K  + S +  ++ I
Sbjct: 221 GIVPCI-----FSDHNALKLELN--HNKKFGRTSNTWRLRTI 255


>gi|207347830|gb|EDZ73883.1| YBL019Wp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 442

 Score = 78.7 bits (192), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 6/78 (7%)

Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
            +Y+ W+   +    N G RID I++S +    + +A I     G    SDH PV   LD
Sbjct: 307 KMYTVWNMLKNLRPSNYGSRIDFILVSLKLERCIKTADILPDILG----SDHCPVYSDLD 362

Query: 263 IPEPRKKQQDSTSQNMKP 280
           I     + +  T+Q   P
Sbjct: 363 I--VDDRIEPGTTQVAIP 378



 Score = 46.7 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 39/138 (28%), Gaps = 17/138 (12%)

Query: 2   SVVTVATWNVNSIRA------------RIHNLAAWIKENNPDIICLQETKTEDKNFPFET 49
           + +   T+NVN IR              + ++  + +    DII  QE KTE  +     
Sbjct: 15  NTIRFLTFNVNGIRTFFHYQPFSQMNQSLRSVFDFFR---ADIITFQELKTEKLSISKWG 71

Query: 50  LQSLNYHIETCGQKS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107
                Y   +  Q    Y+GV    +        +     +  +          N +   
Sbjct: 72  RVDGFYSFISIPQNRKGYSGVGCWIRIPEKNHPLYHALQVVKAEEGITGYLTIKNGKHSA 131

Query: 108 IGNLYLPHGNPITSTKYD 125
           I      +         D
Sbjct: 132 ISYRNDVNQGIGGYDSLD 149


>gi|323306058|gb|EGA59792.1| Apn2p [Saccharomyces cerevisiae FostersB]
          Length = 404

 Score = 78.7 bits (192), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 6/78 (7%)

Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
            +Y+ W+   +    N G RID I++S +    + +A I     G    SDH PV   LD
Sbjct: 269 KMYTVWNMLKNLRPSNYGSRIDFILVSLKLERCIKTADILPDILG----SDHCPVYSDLD 324

Query: 263 IPEPRKKQQDSTSQNMKP 280
           I     + +  T+Q   P
Sbjct: 325 I--VDDRIEPGTTQVAIP 340


>gi|281346976|gb|EFB22560.1| hypothetical protein PANDA_001632 [Ailuropoda melanoleuca]
          Length = 350

 Score = 78.7 bits (192), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 48/272 (17%), Positives = 85/272 (31%), Gaps = 34/272 (12%)

Query: 12  NSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVA 69
           N + + I    +A WIK ++P I CLQET  E K+     ++  +      G +   GVA
Sbjct: 2   NGLNSPIKRHRVADWIKRHDPSICCLQETHFEPKDAFRLRVRGWSTIFHANGPQKKAGVA 61

Query: 70  ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKIS 129
           IL   +                 +            + +          I +    ++ +
Sbjct: 62  ILISDRLDF--------------KLEAIERDTEGHYIILKGSIQQVDMTIINIYAPNRGA 107

Query: 130 WIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNM 189
                      +  +++  +  GD N      D               E +     L  +
Sbjct: 108 ARYTSQLLTKIKRHIDKNTVIVGDLNTPLSEIDRTPWQKLSK------ESKALNAILDEL 161

Query: 190 GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT 249
              D  R  H     YSF+     ++S     RIDH +      S      I        
Sbjct: 162 DLIDIYRTLHPRTKEYSFYSNAHGTFS-----RIDHALGHKTGLSQYQKIEIIPCI---- 212

Query: 250 KPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
             SDH  + + L+     K  ++S +  ++ I
Sbjct: 213 -FSDHNALKLELN--HKEKPGRNSNTWRLRTI 241


>gi|281347163|gb|EFB22747.1| hypothetical protein PANDA_014986 [Ailuropoda melanoleuca]
          Length = 349

 Score = 78.7 bits (192), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 48/272 (17%), Positives = 85/272 (31%), Gaps = 34/272 (12%)

Query: 12  NSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVA 69
           N + + I    +A WIK ++P I CLQET  E K+     ++  +      G +   GVA
Sbjct: 1   NGLNSPIKRHRVADWIKRHDPSICCLQETHFEPKDAFRLRVRGWSTIFHANGPQKKAGVA 60

Query: 70  ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKIS 129
           IL   +                 +            + +          I +    ++ +
Sbjct: 61  ILISDRLDF--------------KLEAIERDTEGHYIILKGSIQQVDMTIINIYAPNRGA 106

Query: 130 WIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNM 189
                      +  +++  +  GD N      D               E +     L  +
Sbjct: 107 ARYTSQLLTKIKRHIDKNTVIVGDLNTPLSEIDRTPWQKLSK------ESKALNAILDEL 160

Query: 190 GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT 249
              D  R  H     YSF+     ++S     RIDH +      S      I        
Sbjct: 161 DLIDIYRTLHPRTKEYSFYSNAHGTFS-----RIDHALGHKTGLSQYQKIEIIPCI---- 211

Query: 250 KPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
             SDH  + + L+     K  ++S +  ++ I
Sbjct: 212 -FSDHNALKLELN--HKEKPGRNSNTWRLRTI 240


>gi|151946376|gb|EDN64598.1| AP endonuclease [Saccharomyces cerevisiae YJM789]
          Length = 520

 Score = 78.7 bits (192), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 6/78 (7%)

Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
            +Y+ W+   +    N G RID I++S +    + +A I     G    SDH PV   LD
Sbjct: 307 KMYTVWNMLKNLRPSNYGSRIDFILVSLKLERCIKAADILPDILG----SDHCPVYSDLD 362

Query: 263 IPEPRKKQQDSTSQNMKP 280
           I     + +  T+Q   P
Sbjct: 363 I--LDDRIEPGTTQVAIP 378



 Score = 46.7 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 39/138 (28%), Gaps = 17/138 (12%)

Query: 2   SVVTVATWNVNSIRA------------RIHNLAAWIKENNPDIICLQETKTEDKNFPFET 49
           + +   T+NVN IR              + ++  + +    DII  QE KTE  +     
Sbjct: 15  NTIRFLTFNVNGIRTFFHYQPFSQMNQSLRSVFDFFR---ADIITFQELKTEKLSISKWG 71

Query: 50  LQSLNYHIETCGQKS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107
                Y   +  Q    Y+GV    +        +     +  +          N +   
Sbjct: 72  RVDGFYSFISIPQTRKGYSGVGCWIRIPEKNHPLYHALQVVKAEEGITGYLTIKNGKHSA 131

Query: 108 IGNLYLPHGNPITSTKYD 125
           I      +         D
Sbjct: 132 ISYRNDVNQGIGGYDSLD 149


>gi|327349957|gb|EGE78814.1| DNA lyase Apn2 [Ajellomyces dermatitidis ATCC 18188]
          Length = 642

 Score = 78.3 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 27/69 (39%), Gaps = 4/69 (5%)

Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253
             +   D   +Y+ W+   ++   N G RID+++          ++ I     G    SD
Sbjct: 263 CRKYHPDRPGMYTCWEQRVNARPGNYGSRIDYVLCDKRMEDWFSASNIQEGLMG----SD 318

Query: 254 HTPVIVSLD 262
           H PV   L 
Sbjct: 319 HCPVFADLK 327



 Score = 65.2 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 11/90 (12%)

Query: 3  VVTVATWNVNSIRA-------RIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
          +V + TWNVN IR        R      A     + DI+  QETK + K+   + +    
Sbjct: 1  MVRLTTWNVNGIRNPFSYHPWREKRSFEAMFDALDADIVIFQETKIQKKDLQDDMVLVNG 60

Query: 55 YHIET---CGQKSYNGVAILSKYQPIEIVT 81
          +         +K Y+GV I ++      + 
Sbjct: 61 WDCFFSLPKYKKGYSGVVIYTRNSKCCPIR 90


>gi|239613861|gb|EEQ90848.1| DNA lyase Apn2 [Ajellomyces dermatitidis ER-3]
          Length = 633

 Score = 78.3 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 27/69 (39%), Gaps = 4/69 (5%)

Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253
             +   D   +Y+ W+   ++   N G RID+++          ++ I     G    SD
Sbjct: 254 CRKYHPDRPGMYTCWEQRVNARPGNYGSRIDYVLCDKRMEDWFSASNIQEGLMG----SD 309

Query: 254 HTPVIVSLD 262
           H PV   L 
Sbjct: 310 HCPVFADLK 318



 Score = 42.5 bits (98), Expect = 0.072,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 16/42 (38%)

Query: 18 IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
            +  A     + DI+  QETK + K+   + +    +    
Sbjct: 28 KRSFEAMFDALDADIVIFQETKIQKKDLQDDMVLVNGWDCFF 69


>gi|255719916|ref|XP_002556238.1| KLTH0H08250p [Lachancea thermotolerans]
 gi|238942204|emb|CAR30376.1| KLTH0H08250p [Lachancea thermotolerans]
          Length = 512

 Score = 78.3 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 4/71 (5%)

Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPS 252
                  D   +Y+ W+   +S   N G RID+I+ +    + L  A I  K  G    S
Sbjct: 290 TRYIQGRDRMKMYTVWNTLRNSRPVNYGSRIDYILATAGLKNDLKKADIWPKIMG----S 345

Query: 253 DHTPVIVSLDI 263
           DH PV   + +
Sbjct: 346 DHCPVFADIQL 356



 Score = 40.5 bits (93), Expect = 0.23,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 20/50 (40%), Gaps = 15/50 (30%)

Query: 4  VTVATWNVNSIRARIH------------NLAAWIKENNPDIICLQETKTE 41
          V   T+NVN IR   H             +  + +    DII  QE KT+
Sbjct: 12 VRFLTFNVNGIRTLFHYHPFSSMNSSLSRVFEYFQS---DIITFQELKTD 58


>gi|261193611|ref|XP_002623211.1| DNA lyase Apn2 [Ajellomyces dermatitidis SLH14081]
 gi|239588816|gb|EEQ71459.1| DNA lyase Apn2 [Ajellomyces dermatitidis SLH14081]
          Length = 629

 Score = 78.3 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 27/69 (39%), Gaps = 4/69 (5%)

Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253
             +   D   +Y+ W+   ++   N G RID+++          ++ I     G    SD
Sbjct: 250 CRKYHPDRPGMYTCWEQRVNARPGNYGSRIDYVLCDKRMEDWFSASNIQEGLMG----SD 305

Query: 254 HTPVIVSLD 262
           H PV   L 
Sbjct: 306 HCPVFADLK 314



 Score = 64.8 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 8/65 (12%)

Query: 3  VVTVATWNVNSIRA-------RIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
          +V + TWNVN IR        R      A     + DI+  QETK + K+   + +    
Sbjct: 1  MVRLTTWNVNGIRNPFSYHPWREKRSFEAMFDALDADIVIFQETKIQKKDLQDDMVLVNG 60

Query: 55 YHIET 59
          +    
Sbjct: 61 WDCFF 65


>gi|47077039|dbj|BAD18453.1| unnamed protein product [Homo sapiens]
          Length = 264

 Score = 78.3 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 53/264 (20%), Positives = 84/264 (31%), Gaps = 32/264 (12%)

Query: 2   SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           S +T+ T NVN +   I    LA+WIK  +P + C+QET    K+     ++      + 
Sbjct: 6   SHITILTLNVNGLNTPIKRHRLASWIKSQDPSVCCIQETHLICKDAYRLKIKGWRKIYQA 65

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             ++   GVAIL   +     T                        + +          I
Sbjct: 66  NRKQKKAGVAILVSDKSDFKPTK--------------IKRDKKGHYIMVKGSMQQEELTI 111

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
            +    +  +           +  L+   I  GD+N      D         D       
Sbjct: 112 LNIYAPNTGAPRFINEVLRDPQRNLDSHTIIMGDFNTPLSIFDRSTRQKVNKDT------ 165

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           +     LQ     D  R  H     Y+F+     ++SK      DHI+ S    S     
Sbjct: 166 QDLNLTLQQADLRDIYRTLHPKSTEYTFFSALHHTYSKT-----DHILGSKALLSKCKRT 220

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDI 263
            I T        SDH+ + + L I
Sbjct: 221 EITTNCL-----SDHSAIKLELRI 239


>gi|171676121|ref|XP_001903014.1| hypothetical protein [Podospora anserina S mat+]
 gi|170936126|emb|CAP60786.1| unnamed protein product [Podospora anserina S mat+]
          Length = 645

 Score = 78.3 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 25/70 (35%), Gaps = 4/70 (5%)

Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
           +            +Y+ WD   +    N G RID+++ S         A I     G   
Sbjct: 255 WDLCREFHPTRTGMYTCWDTRKNCRPGNFGSRIDYVLCSSGIKDWFIDANIQEGLLG--- 311

Query: 251 PSDHTPVIVS 260
            SDH PV  +
Sbjct: 312 -SDHCPVYAT 320



 Score = 37.8 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 27/68 (39%), Gaps = 7/68 (10%)

Query: 13 SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILS 72
          SIRA    +   ++    DI+ +QE K + K+   + +    + +     K   G + ++
Sbjct: 28 SIRA----MFDTLE---ADIVVVQEAKIQRKDLQDDMVLIPGWDVYFSLPKHKKGYSGVA 80

Query: 73 KYQPIEIV 80
           Y      
Sbjct: 81 IYTRSSKC 88


>gi|29420515|dbj|BAC66501.1| DNA lyase [Cordyceps militaris]
          Length = 624

 Score = 78.3 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 5/70 (7%)

Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
            D  R  H     +++ WD   ++   N G RID+I+ S      +  + I     G   
Sbjct: 246 WDICRCFHPRRVGMHTCWDTKRNTRPANVGSRIDYILCSDGIKDWIVDSNIQEGLMG--- 302

Query: 251 PSDHTPVIVS 260
            SDH PV  +
Sbjct: 303 -SDHCPVYAT 311



 Score = 42.1 bits (97), Expect = 0.094,   Method: Composition-based stats.
 Identities = 11/65 (16%), Positives = 23/65 (35%), Gaps = 1/65 (1%)

Query: 17 RIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75
          R      A       DI+ +QETK + K+   + +    + +     +   G + ++ Y 
Sbjct: 15 REKRTFQAMFDILEADIVVMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYT 74

Query: 76 PIEIV 80
               
Sbjct: 75 RNATC 79


>gi|323310178|gb|EGA63370.1| Apn2p [Saccharomyces cerevisiae FostersO]
          Length = 442

 Score = 78.3 bits (191), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 6/78 (7%)

Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
            +Y+ W+   +    N G RID I++S +    + +A I     G    SDH PV   LD
Sbjct: 307 KMYTVWNMLKNLRPSNYGSRIDFILVSLKLERCIKTADILPDILG----SDHCPVYSDLD 362

Query: 263 IPEPRKKQQDSTSQNMKP 280
           I     + +  T+    P
Sbjct: 363 I--VDDRIEPGTTXVAIP 378



 Score = 46.7 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 39/138 (28%), Gaps = 17/138 (12%)

Query: 2   SVVTVATWNVNSIRA------------RIHNLAAWIKENNPDIICLQETKTEDKNFPFET 49
           + +   T+NVN IR              + ++  + +    DII  QE KTE  +     
Sbjct: 15  NTIRFLTFNVNGIRTFFHYQPFSQMNQSLRSVFDFFR---ADIITFQELKTEKLSISKWG 71

Query: 50  LQSLNYHIETCGQKS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107
                Y   +  Q    Y+GV    +        +     +  +          N +   
Sbjct: 72  RVDGFYSFISIPQTRKGYSGVGCWIRIPEKNHPLYHALQVVKAEEGITGYLTIKNGKHSA 131

Query: 108 IGNLYLPHGNPITSTKYD 125
           I      +         D
Sbjct: 132 ISYRNDVNQGIGGYDSLD 149


>gi|156838338|ref|XP_001642876.1| hypothetical protein Kpol_1007p2 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156113453|gb|EDO15018.1| hypothetical protein Kpol_1007p2 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 529

 Score = 77.9 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 4/70 (5%)

Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPS 252
                T     +Y+ W+   ++   N G RID I+LS E    +  A I     G    S
Sbjct: 296 TRYVQTKKRLKMYTVWNTLKNTRPVNYGSRIDFILLSKELQDYILQADILPDVMG----S 351

Query: 253 DHTPVIVSLD 262
           DH PV + +D
Sbjct: 352 DHCPVYLDID 361



 Score = 45.2 bits (105), Expect = 0.010,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 28/79 (35%), Gaps = 11/79 (13%)

Query: 4  VTVATWNVNSIRARIH-----NLAAWIKEN----NPDIICLQETKTEDKNFPFETLQSLN 54
          +   ++NVN +R   H      +   +K +    + D+I  QE KTE             
Sbjct: 16 IRFVSFNVNGVRTLFHYQPFSQMNQSLKASFEYFDADVITFQELKTEKYGISKWGKVDDF 75

Query: 55 YHIETCGQKS--YNGVAIL 71
          Y   +       Y+GV   
Sbjct: 76 YSFISIPSNKKGYSGVGCW 94


>gi|47206818|emb|CAF91198.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 506

 Score = 77.9 bits (190), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 29/96 (30%), Gaps = 6/96 (6%)

Query: 187 QNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT-SLLHSARIDTK 244
               F D  R  H    + ++ W     +   N G RID+I            +A I  +
Sbjct: 184 HGGKFVDTFRYFHPTRANAFTCWSTLTGARQTNYGTRIDYIFADHRLASEQFVAADIMPE 243

Query: 245 PRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
             G    SDH PV   L        +         P
Sbjct: 244 VEG----SDHCPVWGQLSCSLVPSTKPPPLCTRYLP 275


>gi|255561291|ref|XP_002521656.1| ap endonuclease, putative [Ricinus communis]
 gi|223539047|gb|EEF40643.1| ap endonuclease, putative [Ricinus communis]
          Length = 586

 Score = 77.9 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 40/213 (18%), Positives = 63/213 (29%), Gaps = 29/213 (13%)

Query: 98  TFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII 157
               +     + NLY P      + +   K+ +     +     L+    +   GD NI 
Sbjct: 109 CIITDHGHFVLFNLYGPRAESDDTERIHFKLLFYNILQKRWESLLQQGRRIFVVGDLNIA 168

Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK 217
           P   D  +         F +  R    K     F        D    Y+ W     +   
Sbjct: 169 PTAMDRCDADPDFEKNEFRIWFRSMLVKSGGPFFDVFRSKHPDRREAYTCWPSNTGAEQF 228

Query: 218 NKGIRIDHIM-------------LSPEATSLLHSARIDTKPRGWT--------------- 249
           N G RIDHI+             +    +  +    I    + W                
Sbjct: 229 NYGTRIDHILCAGPCLHQEHDFQVHDFVSCHMKDCDILIDYKRWKPGDTMRWKGGWGTKL 288

Query: 250 KPSDHTPVIVSL-DIPEPRKKQQDSTSQNMKPI 281
           + SDH PV  SL +IP+  +    S S    P+
Sbjct: 289 EGSDHAPVYTSLVEIPDIPQHGTPSLSARYLPM 321


>gi|281357785|ref|ZP_06244271.1| Endonuclease/exonuclease/phosphatase [Victivallis vadensis ATCC
           BAA-548]
 gi|281315732|gb|EFA99759.1| Endonuclease/exonuclease/phosphatase [Victivallis vadensis ATCC
           BAA-548]
          Length = 286

 Score = 77.9 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 45/270 (16%), Positives = 82/270 (30%), Gaps = 22/270 (8%)

Query: 5   TVATWNV----NSIRA-RIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYHIE 58
            V  +NV    N  RA RI   A W++   PD+I  QE  +   ++F  +     + +  
Sbjct: 26  RVIGYNVLIGFN--RAERIEETANWLRSRKPDVILFQEIARQSSESFARQAKLWDHSYAA 83

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
            C       + + SK     +   + G         +     +   ++ +          
Sbjct: 84  VCKPWQDYSIGMTSKRPFEMLEMRIDGLHHGY---ILARIDGVYYMSIHLSPFRYAVRIR 140

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
            T          +    +              A   N      +                
Sbjct: 141 ETEIYAKRLKPLLAAGEKVIMMGDFNNPSPYDAARVNSNAAALEARRY-------ETRPH 193

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           +        +    D +         + FW    +    + G+RID  MLS      +  
Sbjct: 194 IENLRNGFFDFQCMDNLLEAGLEDVCF-FWMKKHNYRP-DVGVRIDMAMLSRNLEDQVVE 251

Query: 239 ARIDTKPRGWTK-PSDHTPVIVSL-DIPEP 266
           A +DT  R + +  SDH PVI++L ++  P
Sbjct: 252 AYVDTTRREFFQTLSDHYPVILTLKNLHAP 281


>gi|156094081|ref|XP_001613078.1| AP endonuclease [Plasmodium vivax SaI-1]
 gi|148801952|gb|EDL43351.1| AP endonuclease (DNA-[apurinic or apyrimidinic site] lyase),
           putative [Plasmodium vivax]
          Length = 535

 Score = 77.9 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 57/348 (16%), Positives = 93/348 (26%), Gaps = 92/348 (26%)

Query: 5   TVATWNVNSIRARIHN------LAAWIKENNPDIICLQETKT------------------ 40
           T+ TWN+NSI  R  N        ++    N D++C QE +                   
Sbjct: 167 TIVTWNMNSITVRYKNKDKWNAFMSFFNRINADVLCFQEVRLPALNLCAVKNSKEGKRDR 226

Query: 41  -------EDKNFPFET--------LQSLN-YHIETCGQKSYNGVAILSKYQPIEIVTHLP 84
                  +     F+           + N Y      + S   V I        I  +L 
Sbjct: 227 GKVKNTDQKSQVDFDIMSKILKKDFHNYNAYFSLANIKYSGQLVLIKRNIPVKSIRYNLR 286

Query: 85  GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL 144
            D    +                + + Y P+     + K++ +  + ++  +F S    +
Sbjct: 287 LDADPSEHHEEGRVIIAEFSKFYLLSTYTPNNGF-DTVKFERRRLFDEQLKKFVSHLRNM 345

Query: 145 EEPLIFAGDYNIIPQPH---DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT 201
            + LI+ GD NI P+             +        V Q             I +  D 
Sbjct: 346 GKNLIWTGDLNIAPEDIDLSHPAEFRRMKKGNVPKEFVGQPGCTDFERKNFMGILSAGDL 405

Query: 202 HHLYSFWDYYADSW-------SKNKG-------------------------IR------- 222
              Y        +          NKG                          R       
Sbjct: 406 VDSYRQLAGKGKAKKGEASKGETNKGETSKGGSCNGAATNGAPDINDNIYTWRCPFLMGK 465

Query: 223 -------IDHIMLSPEATSLLHSARID--TKPRGWTKPSDHTPVIVSL 261
                  IDH ++S      + S  I   +        SDH PVI+ L
Sbjct: 466 SCNKAMRIDHFIVSRGFMPNVQSVDIHGYSVFHKNFYGSDHCPVILHL 513


>gi|62087472|dbj|BAD92183.1| arachidonate 5-lipoxygenase variant [Homo sapiens]
          Length = 368

 Score = 77.5 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 58/279 (20%), Positives = 95/279 (34%), Gaps = 35/279 (12%)

Query: 2   SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           S +T+ T NVN + A I    LA WIK  +P + C+QET     +     ++ L    E 
Sbjct: 11  SHITILTINVNGLNAPIKRHRLANWIKSQDPSVCCIQETHLMCGDTHKLKIKGL----EE 66

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
                +   A ++     +          D +  +I    +I  + L I N+Y P+    
Sbjct: 67  DLPSKWKTKAGVAILVSDKTDFKPTKIKRDKEGHYIMVKGSIQQEELTIRNVYAPNTGAP 126

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K                 + +L+   I   D+N      D         D       
Sbjct: 127 RFIKQ-----------VLRDLQRDLDSHTIIMRDFNTPLSTLDRSMRQKVNKDI------ 169

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           ++    LQ     D  R  H      +F+     ++S+     IDHI+ S    S     
Sbjct: 170 QELNSALQQAELIDIYRTLHPKSTECTFFSALHHTYSE-----IDHIVGSKALLSKCKRT 224

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278
              T        SDH+ + + L I   +  Q  ST+  +
Sbjct: 225 ETITNCL-----SDHSAIKLELKI--KKLTQNLSTTWTL 256


>gi|312130396|ref|YP_003997736.1| endonuclease/exonuclease/phosphatase [Leadbetterella byssophila DSM
           17132]
 gi|311906942|gb|ADQ17383.1| Endonuclease/exonuclease/phosphatase [Leadbetterella byssophila DSM
           17132]
          Length = 275

 Score = 77.5 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/271 (14%), Positives = 76/271 (28%), Gaps = 28/271 (10%)

Query: 4   VTVATWN---------VNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           + ++++N         VN+   R   +   I+ ++ DI+ +QE          + L+   
Sbjct: 20  LRISSYNIRMNRANDGVNNWNLRKDKVNELIRYHDFDIVGVQE--AFKDQLD-DMLRMKE 76

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           Y     G++        S          L        +   +                  
Sbjct: 77  YAYTGSGREDGKSAGEHSAILYKTSRFKLLKSGDFWYSETPDVPGKGWDARCCNRICSWA 136

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
               + + K     +               E             +      P+I   D  
Sbjct: 137 RFKDLVTKKEFYVFNSHFDHEGV-------EARRNSGKLLVAKMKEIAGKLPVIAMGDLN 189

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI--RIDHIMLSPEA 232
            T +  Q     Q+   T           + +F     +++  +  +  RID+I +S   
Sbjct: 190 STPDTEQVVYISQHYNDTFNASEMPPYGPIGTF-----NAFKYDAALKDRIDYIFVSEHF 244

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              +      T       PSDH PV+V L+I
Sbjct: 245 --KVKKYATLTDSYQQKFPSDHLPVVVDLEI 273


>gi|2072948|gb|AAC51261.1| putative p150 [Homo sapiens]
          Length = 1275

 Score = 77.5 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 61/279 (21%), Positives = 102/279 (36%), Gaps = 34/279 (12%)

Query: 2   SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           S +T+ T N+N + + I     A+WIK  +P + C+QET    ++     ++      + 
Sbjct: 6   SHITILTLNINGLNSAIKRHRRASWIKSQDPSVCCIQETHLTCRDTHRLKIKGWRKIYQA 65

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            G++   GVAIL   +     T       D +  +I    +I  + L I N+Y P+    
Sbjct: 66  NGKQKKAGVAILVSDKTDFKPT---KIKRDKEGHYIMVKGSIQQEELTILNIYAPNTGAP 122

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K              +  + +L+   +  GD+N      D         D       
Sbjct: 123 RFIKQ-----------VLSDLQRDLDSHTLIMGDFNTPLSTLDRSTRQKVNKDT------ 165

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           ++    L      D  R  H     Y+F+     ++SK     IDHI+ S    S     
Sbjct: 166 QELNSALHQADLIDIYRTLHPKSTEYTFFLAPHHTYSK-----IDHIVGSKALLSKCKRT 220

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278
            I T        SDH+ + + L I      Q  ST+  +
Sbjct: 221 EIITNYL-----SDHSAIKLELRI--KNLTQSRSTTWKL 252


>gi|315047122|ref|XP_003172936.1| DNA-(apurinic or apyrimidinic site) lyase 2 [Arthroderma gypseum
           CBS 118893]
 gi|311343322|gb|EFR02525.1| DNA-(apurinic or apyrimidinic site) lyase 2 [Arthroderma gypseum
           CBS 118893]
          Length = 604

 Score = 77.5 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 4/68 (5%)

Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253
                 +   +Y+ W+   ++   N G RID+I+ S +       + I     G    SD
Sbjct: 259 CREFHPNRTGMYTCWEQRVNARPGNYGSRIDYILCSDDIRPWFVESNIQEGLMG----SD 314

Query: 254 HTPVIVSL 261
           H PV  S+
Sbjct: 315 HCPVYASI 322



 Score = 53.3 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 24/67 (35%), Gaps = 9/67 (13%)

Query: 1  MSVVTVATWNVNSIRARI--------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52
          M+ + + TWNVN IR               A       DI+  QE K + K+   + +  
Sbjct: 1  MA-LRLTTWNVNGIRNPFSYEPWRGNRTFGAMFDILEADIVVFQEAKIQRKDLQDDMVLV 59

Query: 53 LNYHIET 59
            +    
Sbjct: 60 PGWDCYF 66


>gi|242266576|gb|ACS91139.1| APN2 [Microsporum gypseum]
          Length = 596

 Score = 77.5 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 4/68 (5%)

Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253
                 +   +Y+ W+   ++   N G RID+I+ S +       + I     G    SD
Sbjct: 251 CREFHPNRTGMYTCWEQRVNARPGNYGSRIDYILCSDDIRPWFVESNIQEGLMG----SD 306

Query: 254 HTPVIVSL 261
           H PV  S+
Sbjct: 307 HCPVYASI 314


>gi|242266571|gb|ACS91135.1| APN2 [Microsporum gypseum]
          Length = 596

 Score = 77.5 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 4/68 (5%)

Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253
                 +   +Y+ W+   ++   N G RID+I+ S +       + I     G    SD
Sbjct: 251 CREFHPNRTGMYTCWEQRVNARPGNYGSRIDYILCSDDIRPWFVESNIQEGLMG----SD 306

Query: 254 HTPVIVSL 261
           H PV  S+
Sbjct: 307 HCPVYASI 314


>gi|242266565|gb|ACS91130.1| APN2 [Microsporum gypseum]
          Length = 596

 Score = 77.5 bits (189), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 4/68 (5%)

Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253
                 +   +Y+ W+   ++   N G RID+I+ S +       + I     G    SD
Sbjct: 251 CREFHPNRTGMYTCWEQRVNARPGNYGSRIDYILCSDDIRPWFVESNIQEGLMG----SD 306

Query: 254 HTPVIVSL 261
           H PV  S+
Sbjct: 307 HCPVYASI 314


>gi|166208515|gb|ABY84902.1| DNA lyase [Beauveria sp. GN-2004a]
          Length = 576

 Score = 77.1 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 5/70 (7%)

Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
            D  R  H T   +++ WD   ++   N G RID+I+ S    S    + I     G   
Sbjct: 228 WDICRCFHPTRLGMHTCWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQEGLMG--- 284

Query: 251 PSDHTPVIVS 260
            SDH PV  +
Sbjct: 285 -SDHCPVYAT 293



 Score = 39.4 bits (90), Expect = 0.56,   Method: Composition-based stats.
 Identities = 9/60 (15%), Positives = 24/60 (40%), Gaps = 3/60 (5%)

Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80
          +   ++    DI+ +QETK + K+   + +    + +     +   G + ++ Y      
Sbjct: 5  MFDILE---ADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATC 61


>gi|165874703|gb|ABY68234.1| DNA lyase [Beauveria bassiana]
          Length = 576

 Score = 77.1 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 5/70 (7%)

Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
            D  R  H T   +++ WD   ++   N G RID+I+ S    S    + I     G   
Sbjct: 228 WDICRCFHPTRLGMHTCWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQEGLMG--- 284

Query: 251 PSDHTPVIVS 260
            SDH PV  +
Sbjct: 285 -SDHCPVYAT 293



 Score = 40.9 bits (94), Expect = 0.22,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 22/60 (36%)

Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80
            A       DI+ +QETK + K+   + +    + +     +   G + ++ Y      
Sbjct: 2  FQAMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATC 61


>gi|62085846|gb|AAX63314.1| DNA lyase [Beauveria bassiana]
          Length = 579

 Score = 77.1 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 5/70 (7%)

Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
            D  R  H T   +++ WD   ++   N G RID+I+ S    S    + I     G   
Sbjct: 228 WDICRCFHPTRLGMHTCWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQEGLMG--- 284

Query: 251 PSDHTPVIVS 260
            SDH PV  +
Sbjct: 285 -SDHCPVYAT 293



 Score = 40.9 bits (94), Expect = 0.22,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 22/60 (36%)

Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80
            A       DI+ +QETK + K+   + +    + +     +   G + ++ Y      
Sbjct: 2  FQAMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATC 61


>gi|62085834|gb|AAX63308.1| DNA lyase [Beauveria bassiana]
          Length = 579

 Score = 77.1 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 5/70 (7%)

Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
            D  R  H T   +++ WD   ++   N G RID+I+ S    S    + I     G   
Sbjct: 228 WDICRCFHPTRLGMHTCWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQEGLMG--- 284

Query: 251 PSDHTPVIVS 260
            SDH PV  +
Sbjct: 285 -SDHCPVYAT 293



 Score = 40.9 bits (94), Expect = 0.22,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 22/60 (36%)

Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80
            A       DI+ +QETK + K+   + +    + +     +   G + ++ Y      
Sbjct: 2  FQAMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATC 61


>gi|62085804|gb|AAX63293.1| DNA lyase [Beauveria bassiana]
          Length = 579

 Score = 77.1 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 5/70 (7%)

Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
            D  R  H T   +++ WD   ++   N G RID+I+ S    S    + I     G   
Sbjct: 228 WDICRCFHPTRLGMHTCWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQEGLMG--- 284

Query: 251 PSDHTPVIVS 260
            SDH PV  +
Sbjct: 285 -SDHCPVYAT 293



 Score = 40.9 bits (94), Expect = 0.22,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 22/60 (36%)

Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80
            A       DI+ +QETK + K+   + +    + +     +   G + ++ Y      
Sbjct: 2  FQAMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATC 61


>gi|62085790|gb|AAX63286.1| DNA lyase [Beauveria bassiana]
          Length = 579

 Score = 77.1 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 5/70 (7%)

Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
            D  R  H T   +++ WD   ++   N G RID+I+ S    S    + I     G   
Sbjct: 228 WDICRCFHPTRLGMHTCWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQEGLMG--- 284

Query: 251 PSDHTPVIVS 260
            SDH PV  +
Sbjct: 285 -SDHCPVYAT 293



 Score = 40.9 bits (94), Expect = 0.22,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 22/60 (36%)

Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80
            A       DI+ +QETK + K+   + +    + +     +   G + ++ Y      
Sbjct: 2  FQAMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATC 61


>gi|62085822|gb|AAX63302.1| DNA lyase [Beauveria bassiana]
          Length = 579

 Score = 77.1 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 5/70 (7%)

Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
            D  R  H T   +++ WD   ++   N G RID+I+ S    S    + I     G   
Sbjct: 228 WDICRCFHPTRLGMHTCWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQEGLMG--- 284

Query: 251 PSDHTPVIVS 260
            SDH PV  +
Sbjct: 285 -SDHCPVYAT 293



 Score = 40.9 bits (94), Expect = 0.22,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 22/60 (36%)

Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80
            A       DI+ +QETK + K+   + +    + +     +   G + ++ Y      
Sbjct: 2  FQAMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATC 61


>gi|62085838|gb|AAX63310.1| DNA lyase [Beauveria bassiana]
          Length = 579

 Score = 77.1 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 5/70 (7%)

Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
            D  R  H T   +++ WD   ++   N G RID+I+ S    S    + I     G   
Sbjct: 228 WDICRCFHPTRLGMHTCWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQEGLMG--- 284

Query: 251 PSDHTPVIVS 260
            SDH PV  +
Sbjct: 285 -SDHCPVYAT 293



 Score = 40.9 bits (94), Expect = 0.22,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 22/60 (36%)

Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80
            A       DI+ +QETK + K+   + +    + +     +   G + ++ Y      
Sbjct: 2  FQAMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATC 61


>gi|62085798|gb|AAX63290.1| DNA lyase [Beauveria bassiana]
 gi|62085850|gb|AAX63316.1| DNA lyase [Beauveria bassiana]
          Length = 579

 Score = 77.1 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 5/70 (7%)

Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
            D  R  H T   +++ WD   ++   N G RID+I+ S    S    + I     G   
Sbjct: 228 WDICRCFHPTRLGMHTCWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQEGLMG--- 284

Query: 251 PSDHTPVIVS 260
            SDH PV  +
Sbjct: 285 -SDHCPVYAT 293



 Score = 40.9 bits (94), Expect = 0.22,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 22/60 (36%)

Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80
            A       DI+ +QETK + K+   + +    + +     +   G + ++ Y      
Sbjct: 2  FQAMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATC 61


>gi|62085788|gb|AAX63285.1| DNA lyase [Beauveria bassiana]
 gi|62085830|gb|AAX63306.1| DNA lyase [Beauveria bassiana]
 gi|62085840|gb|AAX63311.1| DNA lyase [Beauveria bassiana]
          Length = 579

 Score = 77.1 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 5/70 (7%)

Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
            D  R  H T   +++ WD   ++   N G RID+I+ S    S    + I     G   
Sbjct: 228 WDICRCFHPTRLGMHTCWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQEGLMG--- 284

Query: 251 PSDHTPVIVS 260
            SDH PV  +
Sbjct: 285 -SDHCPVYAT 293



 Score = 40.9 bits (94), Expect = 0.22,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 22/60 (36%)

Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80
            A       DI+ +QETK + K+   + +    + +     +   G + ++ Y      
Sbjct: 2  FQAMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATC 61


>gi|62085874|gb|AAX63328.1| DNA lyase [Beauveria bassiana]
          Length = 579

 Score = 77.1 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 5/70 (7%)

Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
            D  R  H T   +++ WD   ++   N G RID+I+ S    S    + I     G   
Sbjct: 228 WDICRCFHPTRLGMHTCWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQEGLMG--- 284

Query: 251 PSDHTPVIVS 260
            SDH PV  +
Sbjct: 285 -SDHCPVYAT 293



 Score = 40.9 bits (94), Expect = 0.22,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 22/60 (36%)

Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80
            A       DI+ +QETK + K+   + +    + +     +   G + ++ Y      
Sbjct: 2  FQAMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATC 61


>gi|62085810|gb|AAX63296.1| DNA lyase [Beauveria bassiana]
          Length = 579

 Score = 77.1 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 5/70 (7%)

Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
            D  R  H T   +++ WD   ++   N G RID+I+ S    S    + I     G   
Sbjct: 228 WDICRCFHPTRLGMHTCWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQEGLMG--- 284

Query: 251 PSDHTPVIVS 260
            SDH PV  +
Sbjct: 285 -SDHCPVYAT 293



 Score = 40.9 bits (94), Expect = 0.22,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 22/60 (36%)

Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80
            A       DI+ +QETK + K+   + +    + +     +   G + ++ Y      
Sbjct: 2  FQAMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATC 61


>gi|62085892|gb|AAX63337.1| DNA lyase [Cordyceps brongniartii]
          Length = 580

 Score = 77.1 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 5/70 (7%)

Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
            D  R  H T   +++ WD   ++   N G RID+I+ S    S    + I     G   
Sbjct: 228 WDICRCFHPTRLGMHTCWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQEGLMG--- 284

Query: 251 PSDHTPVIVS 260
            SDH PV  +
Sbjct: 285 -SDHCPVYAT 293



 Score = 40.9 bits (94), Expect = 0.22,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 22/60 (36%)

Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80
            A       DI+ +QETK + K+   + +    + +     +   G + ++ Y      
Sbjct: 2  FQAMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATC 61


>gi|62085780|gb|AAX63281.1| DNA lyase [Beauveria sp. ARSEF 32]
          Length = 579

 Score = 77.1 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 5/70 (7%)

Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
            D  R  H T   +++ WD   ++   N G RID+I+ S    S    + I     G   
Sbjct: 228 WDICRCFHPTRLGMHTCWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQEGLMG--- 284

Query: 251 PSDHTPVIVS 260
            SDH PV  +
Sbjct: 285 -SDHCPVYAT 293



 Score = 40.9 bits (94), Expect = 0.22,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 22/60 (36%)

Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80
            A       DI+ +QETK + K+   + +    + +     +   G + ++ Y      
Sbjct: 2  FQAMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATC 61


>gi|62085820|gb|AAX63301.1| DNA lyase [Beauveria bassiana]
          Length = 579

 Score = 77.1 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 5/70 (7%)

Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
            D  R  H T   +++ WD   ++   N G RID+I+ S    S    + I     G   
Sbjct: 228 WDICRCFHPTRLGMHTCWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQEGLMG--- 284

Query: 251 PSDHTPVIVS 260
            SDH PV  +
Sbjct: 285 -SDHCPVYAT 293



 Score = 40.9 bits (94), Expect = 0.22,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 22/60 (36%)

Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80
            A       DI+ +QETK + K+   + +    + +     +   G + ++ Y      
Sbjct: 2  FQAMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATC 61


>gi|62085808|gb|AAX63295.1| DNA lyase [Beauveria bassiana]
          Length = 579

 Score = 77.1 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 5/70 (7%)

Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
            D  R  H T   +++ WD   ++   N G RID+I+ S    S    + I     G   
Sbjct: 228 WDICRCFHPTRLGMHTCWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQEGLMG--- 284

Query: 251 PSDHTPVIVS 260
            SDH PV  +
Sbjct: 285 -SDHCPVYAT 293



 Score = 40.9 bits (94), Expect = 0.22,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 22/60 (36%)

Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80
            A       DI+ +QETK + K+   + +    + +     +   G + ++ Y      
Sbjct: 2  FQAMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATC 61


>gi|62085836|gb|AAX63309.1| DNA lyase [Cordyceps brongniartii]
          Length = 579

 Score = 77.1 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 5/70 (7%)

Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
            D  R  H T   +++ WD   ++   N G RID+I+ S    S    + I     G   
Sbjct: 228 WDICRCFHPTRLGMHTCWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQEGLMG--- 284

Query: 251 PSDHTPVIVS 260
            SDH PV  +
Sbjct: 285 -SDHCPVYAT 293



 Score = 40.9 bits (94), Expect = 0.22,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 22/60 (36%)

Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80
            A       DI+ +QETK + K+   + +    + +     +   G + ++ Y      
Sbjct: 2  FQAMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATC 61


>gi|62085782|gb|AAX63282.1| DNA lyase [Beauveria bassiana]
 gi|62085784|gb|AAX63283.1| DNA lyase [Beauveria bassiana]
          Length = 579

 Score = 77.1 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 5/70 (7%)

Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
            D  R  H T   +++ WD   ++   N G RID+I+ S    S    + I     G   
Sbjct: 228 WDICRCFHPTRLGMHTCWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQEGLMG--- 284

Query: 251 PSDHTPVIVS 260
            SDH PV  +
Sbjct: 285 -SDHCPVYAT 293



 Score = 40.9 bits (94), Expect = 0.22,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 22/60 (36%)

Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80
            A       DI+ +QETK + K+   + +    + +     +   G + ++ Y      
Sbjct: 2  FQAMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATC 61


>gi|62085786|gb|AAX63284.1| DNA lyase [Beauveria bassiana]
 gi|62085844|gb|AAX63313.1| DNA lyase [Beauveria bassiana]
          Length = 579

 Score = 77.1 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 5/70 (7%)

Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
            D  R  H T   +++ WD   ++   N G RID+I+ S    S    + I     G   
Sbjct: 228 WDICRCFHPTRLGMHTCWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQEGLMG--- 284

Query: 251 PSDHTPVIVS 260
            SDH PV  +
Sbjct: 285 -SDHCPVYAT 293



 Score = 40.9 bits (94), Expect = 0.22,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 22/60 (36%)

Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80
            A       DI+ +QETK + K+   + +    + +     +   G + ++ Y      
Sbjct: 2  FQAMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATC 61


>gi|62085794|gb|AAX63288.1| DNA lyase [Beauveria bassiana]
          Length = 579

 Score = 77.1 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 5/70 (7%)

Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
            D  R  H T   +++ WD   ++   N G RID+I+ S    S    + I     G   
Sbjct: 228 WDICRCFHPTRLGMHTCWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQEGLMG--- 284

Query: 251 PSDHTPVIVS 260
            SDH PV  +
Sbjct: 285 -SDHCPVYAT 293



 Score = 40.9 bits (94), Expect = 0.22,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 22/60 (36%)

Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80
            A       DI+ +QETK + K+   + +    + +     +   G + ++ Y      
Sbjct: 2  FQAMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATC 61


>gi|62085802|gb|AAX63292.1| DNA lyase [Beauveria bassiana]
          Length = 579

 Score = 77.1 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 5/70 (7%)

Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
            D  R  H T   +++ WD   ++   N G RID+I+ S    S    + I     G   
Sbjct: 228 WDICRCFHPTRLGMHTCWDTKRNTRPANVGSRIDYILCSDGLKSWFVDSNIQEGLMG--- 284

Query: 251 PSDHTPVIVS 260
            SDH PV  +
Sbjct: 285 -SDHCPVYAT 293



 Score = 40.9 bits (94), Expect = 0.22,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 22/60 (36%)

Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80
            A       DI+ +QETK + K+   + +    + +     +   G + ++ Y      
Sbjct: 2  FQAMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATC 61


>gi|227543866|ref|ZP_03973915.1| exodeoxyribonuclease III [Lactobacillus reuteri CF48-3A]
 gi|300909611|ref|ZP_07127072.1| exodeoxyribonuclease III [Lactobacillus reuteri SD2112]
 gi|227186154|gb|EEI66225.1| exodeoxyribonuclease III [Lactobacillus reuteri CF48-3A]
 gi|300893476|gb|EFK86835.1| exodeoxyribonuclease III [Lactobacillus reuteri SD2112]
          Length = 174

 Score = 77.1 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 5/130 (3%)

Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG 190
             R        L+  +P+I  GD ++  QP D   P    + A FT + R  F KL N G
Sbjct: 43  WDRAFLDYVTNLQSSKPVIIGGDMSVAYQPIDLAEPTEDHHKAGFTKQERADFGKLLNAG 102

Query: 191 FTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT 249
            TD  R  H   H  Y++W+Y  D+  +N G R+++ ++S      +  A+I +      
Sbjct: 103 LTDTFRYLHPNLHGAYTWWNYRYDARERNVGWRLNYFLVSDVWKERIEEAKILSDV---- 158

Query: 250 KPSDHTPVIV 259
           K S H P+ +
Sbjct: 159 KGSSHCPIEL 168


>gi|256377724|ref|YP_003101384.1| endonuclease/exonuclease/phosphatase [Actinosynnema mirum DSM
           43827]
 gi|255922027|gb|ACU37538.1| Endonuclease/exonuclease/phosphatase [Actinosynnema mirum DSM
           43827]
          Length = 276

 Score = 77.1 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 52/264 (19%), Positives = 89/264 (33%), Gaps = 16/264 (6%)

Query: 4   VTVATWNVNSIRA---RIHNLAAWIKENNPDIICLQETKT-EDKNFPFETLQSLNYHIET 59
           + V TWNV   RA   R      W+     D++ L E    E        L+   Y +  
Sbjct: 7   LRVLTWNVQ--RASAARTRAQVEWLVRQEADVLVLTEVSAGESGGLLARWLRERGYQVLL 64

Query: 60  CGQKSYNGVAI-LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
                 +   + L+    + +     G  +  +    +   +     +    +       
Sbjct: 65  PDPAPEDRYRVLLACPADVGLEEADSGVPMPHRCVAAKVKSSAMEVGVVGLYVPSRGPRE 124

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
             +         +   L   + RL    P++ AGD N++   H   +P        F   
Sbjct: 125 RRNVAKRAFQEEVSAALPGLTARLGAAGPVVVAGDQNVVEPGHIPAHP-------VFGAW 177

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
               ++     GFTDA R  H     +S++     +  +N G R DH+ L+    +L   
Sbjct: 178 EYDFYRSFAEAGFTDAFRLRHPEAVEHSWFGRDTGAGKRN-GYRFDHVFLTTTHAALARD 236

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
            R    PR     SDH+ + V LD
Sbjct: 237 CRYLHTPR-EDGLSDHSAMEVVLD 259


>gi|322696797|gb|EFY88584.1| DNA lyase [Metarhizium acridum CQMa 102]
          Length = 634

 Score = 77.1 bits (188), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 5/71 (7%)

Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
            D  R  H +   + + WD   ++   N G RID+I+ S        SA I     G   
Sbjct: 254 WDLCRCFHPSRLGMNTCWDTKKNTRPANNGSRIDYILCSNGIKDWFTSANIQEGLMG--- 310

Query: 251 PSDHTPVIVSL 261
            SDH PV  ++
Sbjct: 311 -SDHCPVFATI 320



 Score = 57.1 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 31/84 (36%), Gaps = 8/84 (9%)

Query: 5  TVATWNVNSIRA-------RIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56
           + TWNVN IR        R      A       DI+ +QETK + K+   + +    + 
Sbjct: 4  RITTWNVNGIRNPFGYQPWREQRTFQAMFDILESDIVVMQETKIQRKDLQDDMVLVPGWD 63

Query: 57 IETCGQKSYNGVAILSKYQPIEIV 80
          +     K   G + ++ Y      
Sbjct: 64 VFFSLPKHKKGYSGVAIYTRNASC 87


>gi|259482425|tpe|CBF76897.1| TPA: DNA lyase Apn2 (AFU_orthologue; AFUA_3G06180) [Aspergillus
           nidulans FGSC A4]
          Length = 612

 Score = 77.1 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 26/72 (36%), Gaps = 4/72 (5%)

Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
           F            +Y+ W+   ++   N G RID+++ S +       + I     G   
Sbjct: 252 FDICRSFHPKRKGMYTCWEQRINARPGNYGSRIDYVLCSLDMKDWFFDSNIQEGLMG--- 308

Query: 251 PSDHTPVIVSLD 262
            SDH PV     
Sbjct: 309 -SDHCPVYAVFK 319



 Score = 43.6 bits (101), Expect = 0.027,   Method: Composition-based stats.
 Identities = 11/63 (17%), Positives = 22/63 (34%), Gaps = 11/63 (17%)

Query: 5  TVATWNVNSI--------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56
           + TWN   +        R+      +       DI+ +QETK + K+   + +    + 
Sbjct: 4  RITTWN--GLNPFSYEPWRS-TRTFESMFDILEADIVVVQETKIQRKDLRDDMVLVPGWD 60

Query: 57 IET 59
             
Sbjct: 61 CYF 63


>gi|209878826|ref|XP_002140854.1| endonuclease/exonuclease/phosphatase family protein
           [Cryptosporidium muris RN66]
 gi|209556460|gb|EEA06505.1| endonuclease/exonuclease/phosphatase family protein
           [Cryptosporidium muris RN66]
          Length = 482

 Score = 77.1 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 31/80 (38%), Gaps = 6/80 (7%)

Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL- 261
           + Y+ WD    S   N+G RID  ++S    + +    I     G    SDH P+++ + 
Sbjct: 301 NKYTCWDQTKCSRINNRGSRIDLFLVSRNLINRVKGCEIIDNVCG----SDHCPIVLIMS 356

Query: 262 -DIPEPRKKQQDSTSQNMKP 280
            ++         S      P
Sbjct: 357 GNLQNINPNTPPSLCSKYLP 376


>gi|67537132|ref|XP_662340.1| hypothetical protein AN4736.2 [Aspergillus nidulans FGSC A4]
 gi|40741588|gb|EAA60778.1| hypothetical protein AN4736.2 [Aspergillus nidulans FGSC A4]
          Length = 554

 Score = 77.1 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 26/72 (36%), Gaps = 4/72 (5%)

Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
           F            +Y+ W+   ++   N G RID+++ S +       + I     G   
Sbjct: 194 FDICRSFHPKRKGMYTCWEQRINARPGNYGSRIDYVLCSLDMKDWFFDSNIQEGLMG--- 250

Query: 251 PSDHTPVIVSLD 262
            SDH PV     
Sbjct: 251 -SDHCPVYAVFK 261


>gi|29501198|dbj|BAC67542.1| DNA lyase [Isaria tenuipes]
          Length = 607

 Score = 77.1 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 29/74 (39%), Gaps = 5/74 (6%)

Query: 188 NMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR 246
           +    D  R  H     +++ WD   ++   N G RID+I+ S         + I     
Sbjct: 242 DGVLWDICRCFHPTRRGMHTCWDTKRNTRPANLGSRIDYILCSDGIKDWFVDSNIQEGLM 301

Query: 247 GWTKPSDHTPVIVS 260
           G    SDH PV  +
Sbjct: 302 G----SDHCPVYAT 311



 Score = 42.1 bits (97), Expect = 0.090,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 23/65 (35%), Gaps = 1/65 (1%)

Query: 17 RIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75
          R      A       DI+ LQETK + K+   + +    + +     +   G + ++ Y 
Sbjct: 15 REKRTFQAMFDILEADIVILQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYT 74

Query: 76 PIEIV 80
               
Sbjct: 75 KNATC 79


>gi|62085812|gb|AAX63297.1| DNA lyase [Beauveria bassiana]
 gi|62085814|gb|AAX63298.1| DNA lyase [Beauveria bassiana]
 gi|62085824|gb|AAX63303.1| DNA lyase [Beauveria bassiana]
 gi|62085826|gb|AAX63304.1| DNA lyase [Beauveria bassiana]
          Length = 579

 Score = 77.1 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 5/70 (7%)

Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
            D  R  H T   +++ WD   ++   N G RID+I  S    S    + I     G   
Sbjct: 228 WDICRCFHPTRLGMHTCWDTKRNTRPANVGSRIDYIFCSDGLKSWFVDSNIQEGLMG--- 284

Query: 251 PSDHTPVIVS 260
            SDH PV  +
Sbjct: 285 -SDHCPVYAT 293



 Score = 40.2 bits (92), Expect = 0.32,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 22/60 (36%)

Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80
            A       DI+ +QETK + K+   + +    + +     +   G + ++ Y      
Sbjct: 2  FQAMFDILEADIVIMQETKIQRKDLRDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATC 61


>gi|62085890|gb|AAX63336.1| DNA lyase [Beauveria bassiana]
          Length = 579

 Score = 77.1 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 5/70 (7%)

Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
            D  R  H T   +++ WD   ++   N G RID+I  S    S    + I     G   
Sbjct: 228 WDICRCFHPTRLGMHTCWDTKRNTRPANVGSRIDYIFCSDGLKSWFVDSNIQEGLMG--- 284

Query: 251 PSDHTPVIVS 260
            SDH PV  +
Sbjct: 285 -SDHCPVYAT 293



 Score = 40.2 bits (92), Expect = 0.32,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 22/60 (36%)

Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80
            A       DI+ +QETK + K+   + +    + +     +   G + ++ Y      
Sbjct: 2  FQAMFDILEADIVIMQETKIQRKDLRDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATC 61


>gi|62085806|gb|AAX63294.1| DNA lyase [Beauveria bassiana]
 gi|62085816|gb|AAX63299.1| DNA lyase [Beauveria bassiana]
 gi|62085818|gb|AAX63300.1| DNA lyase [Beauveria bassiana]
 gi|62085828|gb|AAX63305.1| DNA lyase [Beauveria bassiana]
 gi|62085832|gb|AAX63307.1| DNA lyase [Beauveria bassiana]
 gi|62085842|gb|AAX63312.1| DNA lyase [Beauveria bassiana]
 gi|62085848|gb|AAX63315.1| DNA lyase [Beauveria bassiana]
          Length = 579

 Score = 77.1 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 5/70 (7%)

Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
            D  R  H T   +++ WD   ++   N G RID+I  S    S    + I     G   
Sbjct: 228 WDICRCFHPTRLGMHTCWDTKRNTRPANVGSRIDYIFCSDGLKSWFVDSNIQEGLMG--- 284

Query: 251 PSDHTPVIVS 260
            SDH PV  +
Sbjct: 285 -SDHCPVYAT 293



 Score = 40.2 bits (92), Expect = 0.32,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 22/60 (36%)

Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80
            A       DI+ +QETK + K+   + +    + +     +   G + ++ Y      
Sbjct: 2  FQAMFDILEADIVIMQETKIQRKDLRDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATC 61


>gi|62085800|gb|AAX63291.1| DNA lyase [Beauveria bassiana]
          Length = 579

 Score = 77.1 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 5/70 (7%)

Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
            D  R  H T   +++ WD   ++   N G RID+I  S    S    + I     G   
Sbjct: 228 WDICRCFHPTRLGMHTCWDTKRNTRPANVGSRIDYIFCSDGLKSWFVDSNIQEGLMG--- 284

Query: 251 PSDHTPVIVS 260
            SDH PV  +
Sbjct: 285 -SDHCPVYAT 293



 Score = 40.2 bits (92), Expect = 0.32,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 22/60 (36%)

Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80
            A       DI+ +QETK + K+   + +    + +     +   G + ++ Y      
Sbjct: 2  FQAMFDILEADIVIMQETKIQRKDLRDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATC 61


>gi|62085884|gb|AAX63333.1| DNA lyase [Beauveria bassiana]
          Length = 579

 Score = 77.1 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 5/70 (7%)

Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
            D  R  H T   +++ WD   ++   N G RID+I  S    S    + I     G   
Sbjct: 228 WDICRCFHPTRLGMHTCWDTKRNTRPANVGSRIDYIFCSDGLKSWFVDSNIQEGLMG--- 284

Query: 251 PSDHTPVIVS 260
            SDH PV  +
Sbjct: 285 -SDHCPVYAT 293



 Score = 40.2 bits (92), Expect = 0.32,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 22/60 (36%)

Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80
            A       DI+ +QETK + K+   + +    + +     +   G + ++ Y      
Sbjct: 2  FQAMFDILEADIVIMQETKIQRKDLRDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATC 61


>gi|62085852|gb|AAX63317.1| DNA lyase [Cordyceps staphylinidicola]
 gi|62085854|gb|AAX63318.1| DNA lyase [Beauveria bassiana]
 gi|62085856|gb|AAX63319.1| DNA lyase [Beauveria bassiana]
 gi|62085858|gb|AAX63320.1| DNA lyase [Cordyceps staphylinidicola]
 gi|62085860|gb|AAX63321.1| DNA lyase [Cordyceps staphylinidicola]
 gi|62085862|gb|AAX63322.1| DNA lyase [Cordyceps staphylinidicola]
 gi|62085864|gb|AAX63323.1| DNA lyase [Cordyceps staphylinidicola]
 gi|62085866|gb|AAX63324.1| DNA lyase [Cordyceps bassiana]
 gi|62085868|gb|AAX63325.1| DNA lyase [Beauveria bassiana]
 gi|62085870|gb|AAX63326.1| DNA lyase [Beauveria bassiana]
 gi|62085872|gb|AAX63327.1| DNA lyase [Beauveria bassiana]
 gi|62085876|gb|AAX63329.1| DNA lyase [Beauveria bassiana]
 gi|62085878|gb|AAX63330.1| DNA lyase [Beauveria bassiana]
 gi|62085880|gb|AAX63331.1| DNA lyase [Beauveria bassiana]
 gi|62085882|gb|AAX63332.1| DNA lyase [Beauveria bassiana]
          Length = 579

 Score = 77.1 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 5/70 (7%)

Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
            D  R  H T   +++ WD   ++   N G RID+I  S    S    + I     G   
Sbjct: 228 WDICRCFHPTRLGMHTCWDTKRNTRPANVGSRIDYIFCSDGLKSWFVDSNIQEGLMG--- 284

Query: 251 PSDHTPVIVS 260
            SDH PV  +
Sbjct: 285 -SDHCPVYAT 293



 Score = 40.2 bits (92), Expect = 0.32,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 22/60 (36%)

Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80
            A       DI+ +QETK + K+   + +    + +     +   G + ++ Y      
Sbjct: 2  FQAMFDILEADIVIMQETKIQRKDLRDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATC 61


>gi|62085886|gb|AAX63334.1| DNA lyase [Beauveria bassiana]
 gi|62085888|gb|AAX63335.1| DNA lyase [Beauveria bassiana]
          Length = 579

 Score = 77.1 bits (188), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 5/70 (7%)

Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
            D  R  H T   +++ WD   ++   N G RID+I  S    S    + I     G   
Sbjct: 228 WDICRCFHPTRLGMHTCWDTKRNTRPANVGSRIDYIFCSDGLKSWFVDSNIQEGLMG--- 284

Query: 251 PSDHTPVIVS 260
            SDH PV  +
Sbjct: 285 -SDHCPVYAT 293



 Score = 40.2 bits (92), Expect = 0.32,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 22/60 (36%)

Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80
            A       DI+ +QETK + K+   + +    + +     +   G + ++ Y      
Sbjct: 2  FQAMFDILEADIVIMQETKIQRKDLRDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATC 61


>gi|77410027|ref|ZP_00786588.1| exodeoxyribonuclease [Streptococcus agalactiae COH1]
 gi|77171365|gb|EAO74673.1| exodeoxyribonuclease [Streptococcus agalactiae COH1]
          Length = 224

 Score = 76.8 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 41/138 (29%), Positives = 62/138 (44%), Gaps = 8/138 (5%)

Query: 129 SWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN 188
                        L+ ++P++  GDYN+  +  D  NP      A FT E RQ F  L  
Sbjct: 92  QIWDIKYAEYLATLDSQKPVLATGDYNVAHKEIDLANPSSNRRSAGFTAEERQGFTNLLA 151

Query: 189 MGFTDAIRATH-DTHHLYSFWDYYAD-SWSKNKGIRIDHIMLSPEATSLLHSAR-IDTKP 245
            GFTD  R  H D  ++YS+W   +  S   N G RID+ + S      +  +  I +  
Sbjct: 152 KGFTDTFRYLHGDVPNVYSWWAQRSRTSKINNTGWRIDYWLTSNRVADKITKSEMIHSGD 211

Query: 246 RGWTKPSDHTPVIVSLDI 263
           R      DHTP+I+ +++
Sbjct: 212 RQ-----DHTPIILEIEL 224


>gi|29420517|dbj|BAC66502.1| DNA lyase [Isaria tenuipes]
          Length = 611

 Score = 76.8 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 29/74 (39%), Gaps = 5/74 (6%)

Query: 188 NMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR 246
           +    D  R  H     +++ WD   ++   N G RID+I+ S         + I     
Sbjct: 242 DGVLWDICRCFHPTRRGMHTCWDTKRNTRPANLGSRIDYILCSDGIKDWFVDSNIQEGLM 301

Query: 247 GWTKPSDHTPVIVS 260
           G    SDH PV  +
Sbjct: 302 G----SDHCPVYAT 311



 Score = 41.3 bits (95), Expect = 0.16,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 22/65 (33%), Gaps = 1/65 (1%)

Query: 17 RIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75
          R      A       DI+ LQETK + K+   + +    +       +   G + ++ Y 
Sbjct: 15 REKRTFQAMFDILEADIVILQETKIQRKDLQDDMVLVPGWDAYFSLPQHKKGYSGVAIYT 74

Query: 76 PIEIV 80
               
Sbjct: 75 RNATC 79


>gi|307353970|ref|YP_003895021.1| endonuclease/exonuclease/phosphatase [Methanoplanus petrolearius
           DSM 11571]
 gi|307157203|gb|ADN36583.1| Endonuclease/exonuclease/phosphatase [Methanoplanus petrolearius
           DSM 11571]
          Length = 276

 Score = 76.8 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 48/259 (18%), Positives = 87/259 (33%), Gaps = 21/259 (8%)

Query: 7   ATWNV-N-SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFET-LQSLNYHIETCGQK 63
             WN+ N SI  R    AAW+   N D++ L E K  +  F  E   QS  Y++     +
Sbjct: 35  ICWNIGNPSI-DRAKKQAAWLITQNFDLLLLTECKNSEGCFYIEKYFQSFGYNVVFPKPE 93

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
                 ++   +    V+        + AR +     ++ + + I   Y+P  +  T   
Sbjct: 94  GK-EYGVMVISKFKPEVSDFSKLMTFLSARVVSVKIPLSDKIIEIIVTYVPSRDAST--- 149

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
                   K   +   + L          +  I     +        + + F     + +
Sbjct: 150 ------EKKERKKKFLKNLLSCFENDQTSNNRIFCGDFNILESDHNPHYSFFEEWEYEFY 203

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             L N    DA R  +     YS+     D      G R DH   S      +   +   
Sbjct: 204 SSLSNFHLKDAYRYHNPAKMEYSWVGRTGD------GYRYDHFFASENLIPNIIECKYVH 257

Query: 244 KPRGWTKPSDHTPVIVSLD 262
           +PR   + SDH+ ++  ++
Sbjct: 258 EPR-EKRLSDHSSLVCKIE 275


>gi|6319452|ref|NP_009534.1| Apn2p [Saccharomyces cerevisiae S288c]
 gi|586406|sp|P38207|APN2_YEAST RecName: Full=DNA-(apurinic or apyrimidinic site) lyase 2; AltName:
           Full=AP endonuclease 2; AltName:
           Full=Apurinic-apyrimidinic endonuclease 2
 gi|536013|emb|CAA84838.1| unnamed protein product [Saccharomyces cerevisiae]
 gi|285810316|tpg|DAA07101.1| TPA: Apn2p [Saccharomyces cerevisiae S288c]
          Length = 520

 Score = 76.8 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 6/78 (7%)

Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
            +Y+ W+   +    N G RID I++S +    + +A I     G    SDH PV   LD
Sbjct: 307 KMYTVWNMLKNLRPSNYGSRIDFILVSLKLERCIKAADILPDILG----SDHCPVYSDLD 362

Query: 263 IPEPRKKQQDSTSQNMKP 280
           I     + +  T+Q   P
Sbjct: 363 I--LDDRIEPGTTQVPIP 378



 Score = 46.7 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 39/138 (28%), Gaps = 17/138 (12%)

Query: 2   SVVTVATWNVNSIRA------------RIHNLAAWIKENNPDIICLQETKTEDKNFPFET 49
           + +   T+NVN IR              + ++  + +    DII  QE KTE  +     
Sbjct: 15  NTIRFLTFNVNGIRTFFHYQPFSQMNQSLRSVFDFFR---ADIITFQELKTEKLSISKWG 71

Query: 50  LQSLNYHIETCGQKS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107
                Y   +  Q    Y+GV    +        +     +  +          N +   
Sbjct: 72  RVDGFYSFISIPQTRKGYSGVGCWIRIPEKNHPLYHALQVVKAEEGITGYLTIKNGKHSA 131

Query: 108 IGNLYLPHGNPITSTKYD 125
           I      +         D
Sbjct: 132 ISYRNDVNQGIGGYDSLD 149


>gi|300176314|emb|CBK23625.2| unnamed protein product [Blastocystis hominis]
          Length = 252

 Score = 76.8 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 61/215 (28%), Gaps = 12/215 (5%)

Query: 54  NYHIETCGQKSYNGVAILSKY------QPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107
            Y   +       G + +  +       P   +      D    A               
Sbjct: 12  GYDAFSSHCAHNGGYSGVITFLGSFSQHPKSTIYQRYDSDFVKSADMEGRVCFTFFDNCA 71

Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167
           I N+Y P G+   S +   +  + +  +             I  GD+N        +   
Sbjct: 72  ILNVYFPCGSEEDSARCSFRERFYELIMDLVKIIKVDYPNCILLGDFNTAIACRIGWRLC 131

Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227
                + F L           +    A+       + YS ++        N G RID+I+
Sbjct: 132 YHPKSSSFYLAFMIRDGGCGMIDCFRAL--YPSERNAYSCFNTKLKGRINNFGTRIDYIV 189

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
            +    + L    I +   G    SDH PV+   D
Sbjct: 190 CTRPLRNCLVECAIRSDVTG----SDHLPVVAEFD 220


>gi|51013817|gb|AAT93202.1| YBL019W [Saccharomyces cerevisiae]
          Length = 520

 Score = 76.8 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 6/78 (7%)

Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
            +Y+ W+   +    N G RID I++S +    + +A I     G    SDH PV   LD
Sbjct: 307 KMYTVWNMLKNLRPSNYGSRIDFILVSLKLERCIKAADILPDILG----SDHCPVYSDLD 362

Query: 263 IPEPRKKQQDSTSQNMKP 280
           I     + +  T+Q   P
Sbjct: 363 I--LDDRIEPGTTQVPIP 378



 Score = 45.5 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 22/137 (16%), Positives = 38/137 (27%), Gaps = 17/137 (12%)

Query: 3   VVTVATWNVNSIRA------------RIHNLAAWIKENNPDIICLQETKTEDKNFPFETL 50
            +   T+NVN IR              + ++  + +    DII  QE KTE  +      
Sbjct: 16  TIRFLTFNVNGIRTFFHYQPFSQMNQSLRSVFDFFR---ADIITFQELKTEKLSISKWGR 72

Query: 51  QSLNYHIETCGQKS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108
               Y   +  Q    Y+GV    +        +     +  +          N +   I
Sbjct: 73  VDGFYSFISIPQTRKGYSGVGCWIRIPEKNHPLYHALQVVKAEEGITGYLTIKNGKHSAI 132

Query: 109 GNLYLPHGNPITSTKYD 125
                 +         D
Sbjct: 133 SYRNDVNQGIGGYDSLD 149


>gi|3746499|gb|AAD02928.1| reverse transcriptase [Oryzias latipes]
          Length = 1258

 Score = 76.8 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 47/264 (17%), Positives = 95/264 (35%), Gaps = 37/264 (14%)

Query: 4   VTVATWNVNSIRARIHN-LAAW-----IKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57
           V + T N+N +    HN +  W     +K++  +I+ LQET   +       L  + +  
Sbjct: 6   VKLLTLNINGL----HNPVKRWKTLSKLKQDKAEIVFLQETHLPEA--EHLKLNKMGFKH 59

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
                 S      ++      +      +  D + R+I  T  IN+  + + N+Y+P G+
Sbjct: 60  VFYSSHSSGRRRGVATLIAGAVNYQHVSEYKDKEGRYIMITGKINSILITLLNVYVPPGS 119

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
                 +   I  I       +     +  ++     +                   +  
Sbjct: 120 ---DWSFYRHIFEIISTKSQGTLICGGDFNIVLNNSLDSS------------NGKGDYRK 164

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
             ++    ++ MG  D  R  + T   Y+ + +  +++S     R+D+I +       + 
Sbjct: 165 IGKKMRHLMEEMGIVDVWRENNPTKREYTHYSHPHNAYS-----RLDYIFMFKNDLLRVK 219

Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261
           ++ I     G    SDH PV VSL
Sbjct: 220 NSDI-----GICAISDHNPVTVSL 238


>gi|269862096|ref|XP_002650703.1| exodeoxyribonuclease III [Enterocytozoon bieneusi H348]
 gi|220065747|gb|EED43354.1| exodeoxyribonuclease III [Enterocytozoon bieneusi H348]
          Length = 239

 Score = 76.8 bits (187), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 70/227 (30%), Gaps = 18/227 (7%)

Query: 40  TEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF 99
             D++     +++ +   +   ++ +  V +         +        + +     + +
Sbjct: 4   CSDESLIEAVMETYDKLTDVLNKEQHPVVILCGDMNATYSMCDNYLYMREYEQLHYVSEW 63

Query: 100 TINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159
           +++   +      +  G   T   Y       +  +        ++E  ++      +  
Sbjct: 64  SMSIDHISKVENPIQRGKLHTRDFYMKLQMSSENGIYTEKVAPRIDELPVYFLTKYDLYD 123

Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK 219
                    W  +                  F D  R  +     Y+ WD        N 
Sbjct: 124 HFMEKRQRQWLANLMK--------------TFVDTFRIGNKELFQYTCWDRVLRHRESNL 169

Query: 220 GIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEP 266
           G RID+I+L   +   + SA I     G    SDH PV + +DI EP
Sbjct: 170 GTRIDYILLKTTSHYKIKSAEIRPDIYG----SDHCPVTLEIDIGEP 212


>gi|254564561|ref|XP_002489391.1| Class II abasic (AP) endonuclease involved in repair of DNA damage
           [Pichia pastoris GS115]
 gi|238029187|emb|CAY67107.1| Class II abasic (AP) endonuclease involved in repair of DNA damage
           [Pichia pastoris GS115]
 gi|328349821|emb|CCA36221.1| AP endonuclease 2 [Pichia pastoris CBS 7435]
          Length = 520

 Score = 76.8 bits (187), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 25/71 (35%), Gaps = 4/71 (5%)

Query: 196 RATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHT 255
                    Y+ W+   ++   N G RID I+ S    +      I     G    SDH 
Sbjct: 289 EHHGRVMRSYTVWNTLKNTRPLNIGSRIDLILCSTALLNKFKKCEILPWLMG----SDHC 344

Query: 256 PVIVSLDIPEP 266
           PVI   +  E 
Sbjct: 345 PVIADFEPDES 355



 Score = 47.9 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 23/64 (35%), Gaps = 8/64 (12%)

Query: 4  VTVATWNVNSIRA--------RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55
          V   T+NVN  +         ++ +          DII LQE K +  N   E  +  NY
Sbjct: 16 VRFVTFNVNGTKTLCNYHPWNKMKSFDKIFGYLFADIITLQELKVQKDNLDHELNEIPNY 75

Query: 56 HIET 59
              
Sbjct: 76 RSFV 79


>gi|254993711|ref|ZP_05275901.1| 3'-exo-deoxyribonuclease exoA [Listeria monocytogenes FSL J2-064]
          Length = 48

 Score = 76.4 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 4/51 (7%)

Query: 213 DSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           ++ ++N G RID+ ++S      L  A+I     G    SDH PV + L++
Sbjct: 2   NARARNTGWRIDYFVVSERLKDKLVDAKIHADVLG----SDHCPVELELNL 48


>gi|269862537|ref|XP_002650877.1| exodeoxyribonuclease III [Enterocytozoon bieneusi H348]
 gi|220065478|gb|EED43178.1| exodeoxyribonuclease III [Enterocytozoon bieneusi H348]
          Length = 239

 Score = 76.4 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 67/194 (34%), Gaps = 8/194 (4%)

Query: 73  KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIK 132
           +  P+ I+         +   ++          +   ++ + H + + +    +K+    
Sbjct: 27  EQHPVVILCGDMNATYSMCDNYLYMREYEQLHYVSEWSMSIDHISKVENPTQREKLHTRD 86

Query: 133 RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192
            +++         E  I+             Y    ++    F  + ++ +       F 
Sbjct: 87  FYMKLQ----MSSENGIYTEKVAPRIDELPVYFLTKYDLYDHFMEKRQRQWLANLMKTFV 142

Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPS 252
           D  R  +     Y+ WD        N G RID+I+L   +   + SA I     G    S
Sbjct: 143 DTFRVGNKELFQYTCWDRVLRHRESNLGTRIDYILLKTTSHYKIKSAEIRPDIYG----S 198

Query: 253 DHTPVIVSLDIPEP 266
           DH PV + +DI EP
Sbjct: 199 DHCPVTLEIDIGEP 212


>gi|269864233|ref|XP_002651501.1| exodeoxyribonuclease III [Enterocytozoon bieneusi H348]
 gi|220064406|gb|EED42554.1| exodeoxyribonuclease III [Enterocytozoon bieneusi H348]
          Length = 226

 Score = 76.4 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 67/194 (34%), Gaps = 8/194 (4%)

Query: 73  KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIK 132
           +  P+ I+         +   ++          +   ++ + H + + +    +K+    
Sbjct: 14  EQHPVVILCGDMNATYSMCDNYLYMREYEQLHYVSEWSMSIDHISKVENPTQREKLHTRD 73

Query: 133 RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192
            +++         E  I+             Y    ++    F  + ++ +       F 
Sbjct: 74  FYMKLQ----MSSENGIYTEKVAPRIDELPVYFLTKYDLYDHFMEKRQRQWLANLMKTFV 129

Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPS 252
           D  R  +     Y+ WD        N G RID+I+L   +   + SA I     G    S
Sbjct: 130 DTFRVGNKELFQYTCWDRVLRHRESNLGTRIDYILLKTTSHYKIKSAEIRPDIYG----S 185

Query: 253 DHTPVIVSLDIPEP 266
           DH PV + +DI EP
Sbjct: 186 DHCPVTLEIDIGEP 199


>gi|3746502|gb|AAD02930.1| reverse transcriptase [Oryzias latipes]
          Length = 1258

 Score = 76.4 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 47/264 (17%), Positives = 94/264 (35%), Gaps = 37/264 (14%)

Query: 4   VTVATWNVNSIRARIHN-LAAW-----IKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57
           V + T N+N +    HN +  W     +K++  +I+ LQET   +       L  + +  
Sbjct: 6   VKLLTLNINGL----HNPVKRWKTLSKLKQDKAEIVFLQETHLPEA--EHLKLNKMGFKH 59

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
                 S       +      +      +  D + R+I  T  IN+  + + N+Y+P G+
Sbjct: 60  VFYSSHSSGRRRGGATLIAGAVNYQHVSEYKDKEGRYIMITGKINSILITLLNVYVPPGS 119

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
                 +   I  I       +     +  ++     +                   +  
Sbjct: 120 ---DWSFYRHIFEIISTKSQGTLICGGDFNIVLNNSLDSS------------NGKGDYRK 164

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
             ++    ++ MG  D  R  + T   Y+ + +  +++S     R+D+I +       + 
Sbjct: 165 IGKKMRHLMEEMGIVDVWRENNPTKREYTHYSHPHNAYS-----RLDYIFMFKNDLLRVK 219

Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261
           ++ I     G    SDH PV VSL
Sbjct: 220 NSDI-----GICAISDHNPVTVSL 238


>gi|296804272|ref|XP_002842988.1| ap endonuclease [Arthroderma otae CBS 113480]
 gi|238845590|gb|EEQ35252.1| ap endonuclease [Arthroderma otae CBS 113480]
          Length = 574

 Score = 76.4 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 27/68 (39%), Gaps = 4/68 (5%)

Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253
                     +Y+ W+   ++   N G RID+I+ S +       + I     G    SD
Sbjct: 229 CREFHPHRTGMYTCWEQRVNARPGNYGSRIDYILCSDDIRHWFVESNIQEGLMG----SD 284

Query: 254 HTPVIVSL 261
           H PV  S+
Sbjct: 285 HCPVYASI 292


>gi|147919376|ref|YP_686888.1| hypothetical protein RCIX2491 [uncultured methanogenic archaeon
           RC-I]
 gi|110622284|emb|CAJ37562.1| hypothetical protein RCIX2491 [uncultured methanogenic archaeon
           RC-I]
          Length = 317

 Score = 76.4 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 45/281 (16%), Positives = 85/281 (30%), Gaps = 30/281 (10%)

Query: 2   SVVTVATWNVNS-----IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56
           +++ + +WNV       + A++      +K   PD++ LQE   +      E L++  Y+
Sbjct: 26  NIMRLISWNVMGGYGGHMSAQVEQ----LKNLQPDVVALQEVTAKTAPTYREQLKAAGYY 81

Query: 57  IETCGQKS-YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
                 +S      + S      I +  P     ++         ++   +      L H
Sbjct: 82  SIVDSFQSVKYLTRLRSNSFGELIASRWPLISSPLKFDVPWPEKVLSCFIIGPWGDVLLH 141

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
              I S  Y++          + +     + P I  GD++   +       + W      
Sbjct: 142 TAHIPSGDYNNVKKIETLEGIYKALANPAQYPRILCGDFSTPQEELPDGRIVTWGQKRKR 201

Query: 176 TLEVRQSFQKLQ--------------NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI 221
           T E+       Q                   D  R  +     YS ++      +   G 
Sbjct: 202 TGEIVLQKYWGQRWDTGERNILEKLSEYDLVDVYRKLYLNRPEYSLYETTDGQRT---GR 258

Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
           R DH+  S          R     R   K S H+ + V   
Sbjct: 259 RYDHVFASESLNP--VECRYLHYLR-EKKLSGHSAIEVEFK 296


>gi|50308837|ref|XP_454423.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49643558|emb|CAG99510.1| KLLA0E10473p [Kluyveromyces lactis]
          Length = 499

 Score = 76.4 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 31/80 (38%), Gaps = 4/80 (5%)

Query: 200 DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
           D   +Y+ W+   ++   N G R+D+I +S      +    I T   G    SDH PV  
Sbjct: 292 DRLKMYTVWNTLLNTRPVNYGSRVDYIFVSKGLKDNITDGDILTTIMG----SDHCPVFA 347

Query: 260 SLDIPEPRKKQQDSTSQNMK 279
            + +     K +       +
Sbjct: 348 DIKVDNLELKHESFNKPKFE 367



 Score = 47.5 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 32/84 (38%), Gaps = 10/84 (11%)

Query: 4  VTVATWNVNSIR--------ARIHNLAAW-IKENNPDIICLQETKTEDKNFPFETLQSLN 54
          V   T+NVN +R        +R++N      +    DI+ LQE K + K+   +  +   
Sbjct: 10 VRFVTFNVNGVRTLFQHYPFSRMNNSLKLAFELFQADIVTLQELKIDAKSI-SKWGKVEG 68

Query: 55 YHIETCGQKSYNGVAILSKYQPIE 78
          Y       +   G + +  +    
Sbjct: 69 YQSYITISQKRKGYSGVGCWIRTP 92


>gi|147919368|ref|YP_686896.1| endonuclease/exonuclease [uncultured methanogenic archaeon RC-I]
 gi|110622292|emb|CAJ37570.1| predicted endonuclease/exonuclease [uncultured methanogenic
           archaeon RC-I]
          Length = 294

 Score = 76.4 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 43/302 (14%), Positives = 90/302 (29%), Gaps = 47/302 (15%)

Query: 1   MSV-----VTVATWNVN--SI------------RARIHNLAAWIKENNPDIICLQETKTE 41
           MS+     + + +WN+    I            R  +  +   I   +PD+I LQE +  
Sbjct: 1   MSLVRSDRIRLLSWNICFGGIGAGRTGYDPITSRENLRGIVRAILGKSPDVIVLQEYRDA 60

Query: 42  DK--NFPFETLQSLNYHIETCGQK----------SYNGVAILSKYQPIEIVTHLPGDDLD 89
           ++        L+   Y   +                N   + +              D  
Sbjct: 61  EETGGVIKAGLREAGYTCHSSNPGLDKNGILIALGRNLTDMYAVSPAASFKVDTRRLDEI 120

Query: 90  VQARFIEATFTINTQTLRIGNLYLPH-------GNPITSTKYDDKISWIKRFLRFASQRL 142
            + R+          +  +  +++P        G          K       + +A ++L
Sbjct: 121 YRYRWANLGLKSQGMSFELLGIHIPDVRPGRKGGPETFVRSIGHKQLIWDALIEYAREKL 180

Query: 143 ELEEPLIFAGDYNIIPQ-PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT 201
           +     I AGD+N         +N   +          R      + +            
Sbjct: 181 KTGSEAIIAGDFNTGLNAEDRSHNTDSYYLSDRMAYLKRLKNSHGEGLADAWRKFHPEPG 240

Query: 202 HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
              Y++       +  N+G R+D++ L+P     L       + R  +  SDH+ V+  +
Sbjct: 241 PEDYTW-------FLGNRGFRLDYVFLTPGLGKRLSGVEYSHEER-VSGLSDHSMVLADI 292

Query: 262 DI 263
            +
Sbjct: 293 RL 294


>gi|289672874|ref|ZP_06493764.1| exodeoxyribonuclease III Xth [Pseudomonas syringae pv. syringae
          FF5]
          Length = 57

 Score = 76.4 bits (186), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)

Query: 4  VTVATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
          + + + NVN I+A +   L +W++  N D+ICLQ+T+           Q   Y + 
Sbjct: 1  MRIISVNVNGIQAAVERGLLSWLQAQNADVICLQDTRASTFELDDPAFQLDGYFLY 56


>gi|150007859|ref|YP_001302602.1| hypothetical protein BDI_1219 [Parabacteroides distasonis ATCC
           8503]
 gi|255013440|ref|ZP_05285566.1| hypothetical protein B2_06000 [Bacteroides sp. 2_1_7]
 gi|298376780|ref|ZP_06986735.1| transmembrane endonuclease/exonuclease/phosphatase [Bacteroides sp.
           3_1_19]
 gi|149936283|gb|ABR42980.1| conserved hypothetical protein [Parabacteroides distasonis ATCC
           8503]
 gi|298266658|gb|EFI08316.1| transmembrane endonuclease/exonuclease/phosphatase [Bacteroides sp.
           3_1_19]
          Length = 353

 Score = 76.4 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 48/265 (18%), Positives = 87/265 (32%), Gaps = 27/265 (10%)

Query: 4   VTVATWNVNSIRA----RIHNLAAWIKENNPDIICLQETKTEDK---NFPFETLQSLNYH 56
           V V T+NVN+       ++ N+A W+++ +PDI+CLQE   E     +   +TL  L Y+
Sbjct: 100 VKVITYNVNNFNTDGKKQLPNIADWLRKEDPDIVCLQECPVESALRMDSVAKTLSFLPYY 159

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
             T       G AI SKY    I+        +   + + A   I   ++R+ N +    
Sbjct: 160 CSTRSATKAAGNAIFSKYP---ILRFESILYPESSNKSLFAVMDIQGDSVRVFNNHFQTT 216

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
           +         +     + L        +   +            +        E      
Sbjct: 217 SVNAVKPRLYQAHAEGKQLEETEAAFHMAFQMKKNFVKRATQADYIRQMLDAGEGPVIIC 276

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHH---LYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
            +   +            +            Y+F           +  RID+I+ SP+  
Sbjct: 277 GDFNDTPASYTYRTVKGDLTDGFRDCGSGFGYTF-------RQLKRIFRIDYIIYSPDFK 329

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVI 258
            + + +            SDH PV+
Sbjct: 330 GVTYDS-------PNLDYSDHKPVV 347


>gi|225465549|ref|XP_002274515.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 944

 Score = 76.4 bits (186), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 34/263 (12%), Positives = 79/263 (30%), Gaps = 33/263 (12%)

Query: 1   MSVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           M+ + + +WNV  +  R+    + + I+    D+ CLQETK +      E ++SL     
Sbjct: 1   MN-LRILSWNVRGVNDRLKRKIIKSVIRSQKVDLFCLQETKVQV--MSDEMVRSLG---- 53

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
                                   +           +            I   +   G+ 
Sbjct: 54  ------SGRYIDWKVLNAKGTAGGVIICWDKRSLEILGVEEG----QFSISCRFRNEGDG 103

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
                     + +        +    EE     G +         +N  ++ +D   T  
Sbjct: 104 AIW-----VFTGVYGPFSREDREGLWEELGAIRGLWEEPWCLGGDFNITLYIDDRNRTGR 158

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           +  + ++   +     +         +++    +   +     R+D  + +P        
Sbjct: 159 ITSAMRRFAQIIDELGLVDIPLQGGSFTW----SGGLNNQTRARLDRFLATPCWLDQF-- 212

Query: 239 ARIDTKPRGWTKP-SDHTPVIVS 260
           +R+    R   +P SDH P+++ 
Sbjct: 213 SRVLN--RRLPRPTSDHYPILLE 233


>gi|145346298|ref|XP_001417629.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144577856|gb|ABO95922.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 474

 Score = 76.0 bits (185), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 47/293 (16%), Positives = 74/293 (25%), Gaps = 43/293 (14%)

Query: 21  LAAWIKENNPD--IICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIE 78
           + A       D  +ICLQETK           +   +       +S N     S      
Sbjct: 1   MKALFDALGSDLKVICLQETKLSSSGDVERLERVEGWDGAHAVCESSNHRVGYSGVAVYW 60

Query: 79  IVT-----------------HLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
                                         A F +              L++  G  +  
Sbjct: 61  RSNEICPTSIERGVCAKGDAGESTMWAGEIAPFADDATRAKEIDGEGRALWVDFGEFVLC 120

Query: 122 TKY------------------DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
           T Y                    K  ++           E    +I  GD+NI P     
Sbjct: 121 TVYVPAVFGDPAVDEKTAERAAFKRDFLSALEARYKSLRERGRNVILCGDWNIAPSWKLD 180

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIR 222
                                +L      D  R    T    ++ W+  + +   N G R
Sbjct: 181 RADEDPNAVEPRNPSRDWLAAQLAGDAMVDVFREFFPTLGDAFTCWNVASGAQLSNYGSR 240

Query: 223 IDHIMLSPEAT-SLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDST 274
           ID+ +     T   +    +  K  G    SDH PV + L+    R++    T
Sbjct: 241 IDYFLCDRAVTLKRVRGVGVAQKFEG----SDHAPVYLELEESMWRRRDSQQT 289


>gi|262381640|ref|ZP_06074778.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|262296817|gb|EEY84747.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
          Length = 353

 Score = 76.0 bits (185), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 48/265 (18%), Positives = 87/265 (32%), Gaps = 27/265 (10%)

Query: 4   VTVATWNVNSIRA----RIHNLAAWIKENNPDIICLQETKTEDK---NFPFETLQSLNYH 56
           V V T+NVN+       ++ N+A W+++ +PDI+CLQE   E     +   +TL  L Y+
Sbjct: 100 VKVITYNVNNFNTDGKKQLPNIADWLRKEDPDIVCLQECPVESALRMDSVAKTLSFLPYY 159

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
             T       G AI SKY    I+        +   + + A   I   ++R+ N +    
Sbjct: 160 CSTRSATKAAGNAIFSKYP---ILRFESILYPESSNKSLFAVMDIQGDSVRVFNNHFQTT 216

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
           +         +     + L        +   +            +        E      
Sbjct: 217 SVNAVKPRLYQAHAEGKQLEETEAAFHMAFQMKKNFVKRATQADYIRQMLDAGEGPVIIC 276

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHH---LYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
            +   +            +            Y+F           +  RID+I+ SP+  
Sbjct: 277 GDFNDTPASYTYRTVKGDLTDGFRDCGSGFGYTF-------RQLKRIFRIDYIIYSPDFK 329

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVI 258
            + + +            SDH PV+
Sbjct: 330 GVTYDS-------PNLDYSDHKPVV 347


>gi|300707896|ref|XP_002996140.1| hypothetical protein NCER_100801 [Nosema ceranae BRL01]
 gi|239605413|gb|EEQ82469.1| hypothetical protein NCER_100801 [Nosema ceranae BRL01]
          Length = 414

 Score = 76.0 bits (185), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 4/97 (4%)

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
              + +  +   DA R  H  +  Y+ W+   +   +N G RID+I++  +  + +  + 
Sbjct: 313 WMLKFILELSHIDAFRLFHTGYEKYTCWNIQLNLRPRNLGSRIDYILIPIKFYNRIMFSD 372

Query: 241 IDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQN 277
           I+    G    SDH PV V+L++     K     S+N
Sbjct: 373 IENHVYG----SDHCPVYVNLNLETVDDKDNICKSKN 405



 Score = 60.2 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/181 (18%), Positives = 61/181 (33%), Gaps = 20/181 (11%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKEN-------------NPDIICLQETKTEDKNFPFETL 50
           + + ++NVN I     +   +IK+N               DI+CLQE K   K+   E  
Sbjct: 1   MKIISFNVNGI----KSFDKFIKQNYNLSFNDYLLKIMKADILCLQEIKCTKKDM--EEF 54

Query: 51  QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
            +L     T    +     I      +    +    ++ V       +   + +  +I N
Sbjct: 55  STLK-DFITLTNFNQKTNGIYGVSTFVSKRLYCRRHNISVPYSEYGRSLLTDHKNFKILN 113

Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170
           LY P  +P  +   +  I + +    F S+  +L     F   Y+I              
Sbjct: 114 LYCPFYDPNGNKTKESVIKFYRDIYNFISKYDDLIVLGDFNATYSIFDHYIYYNEFKKNY 173

Query: 171 N 171
           N
Sbjct: 174 N 174


>gi|301310113|ref|ZP_07216052.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 20_3]
 gi|300831687|gb|EFK62318.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 20_3]
          Length = 353

 Score = 76.0 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 48/265 (18%), Positives = 87/265 (32%), Gaps = 27/265 (10%)

Query: 4   VTVATWNVNSIRA----RIHNLAAWIKENNPDIICLQETKTEDK---NFPFETLQSLNYH 56
           V V T+NVN+       ++ N+A W+++ +PDI+CLQE   E     +   +TL  L Y+
Sbjct: 100 VKVITYNVNNFNTDGKKQLPNIADWLRKEDPDIVCLQECPVESALRMDSLAKTLSFLPYY 159

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
             T       G AI SKY    I+        +   + + A   I   ++R+ N +    
Sbjct: 160 CSTRSATKAAGNAIFSKYP---ILRFESILYPESSNKSLFAVMDIQGDSVRVFNNHFQTT 216

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
           +         +     + L        +   +            +        E      
Sbjct: 217 SVNAVKPRLYQAHAEGKQLEETEAAFHMAFQMKKNFVKRATQADYIRQMLDAGEGPVILC 276

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHH---LYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
            +   +            +            Y+F           +  RID+I+ SP+  
Sbjct: 277 GDFNDTPASYTYRTVKGDLTDGFRDCGSGFGYTF-------RQLKRIFRIDYIIYSPDFK 329

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVI 258
            + + +            SDH PV+
Sbjct: 330 GVTYDS-------PNLDYSDHKPVV 347


>gi|256840117|ref|ZP_05545626.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|256739047|gb|EEU52372.1| conserved hypothetical protein [Parabacteroides sp. D13]
          Length = 353

 Score = 76.0 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 48/265 (18%), Positives = 87/265 (32%), Gaps = 27/265 (10%)

Query: 4   VTVATWNVNSIRA----RIHNLAAWIKENNPDIICLQETKTEDK---NFPFETLQSLNYH 56
           V V T+NVN+       ++ N+A W+++ +PDI+CLQE   E     +   +TL  L Y+
Sbjct: 100 VKVITYNVNNFNTDGKKQLPNIADWLRKEDPDIVCLQECPVESALRMDSVAKTLSFLPYY 159

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
             T       G AI SKY    I+        +   + + A   I   ++R+ N +    
Sbjct: 160 CSTRSATKAAGNAIFSKYP---ILRFESILYPESSNKSLFAVMDIQGDSVRVFNNHFQTT 216

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
           +         +     + L        +   +            +        E      
Sbjct: 217 SVNAVKPRLYQAHAEGKQLEETEAAFHMAFQMKKNFVKRATQADYIRQMLDAGEGPVILC 276

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHH---LYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
            +   +            +            Y+F           +  RID+I+ SP+  
Sbjct: 277 GDFNDTPASYTYRTVKGDLTDGFRDCGSGFGYTF-------RQLKRIFRIDYIIYSPDFK 329

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVI 258
            + + +            SDH PV+
Sbjct: 330 GVTYDS-------PNLDYSDHKPVV 347


>gi|302919090|ref|XP_003052788.1| hypothetical protein NECHADRAFT_78136 [Nectria haematococca mpVI
           77-13-4]
 gi|256733728|gb|EEU47075.1| hypothetical protein NECHADRAFT_78136 [Nectria haematococca mpVI
           77-13-4]
          Length = 653

 Score = 76.0 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 26/71 (36%), Gaps = 4/71 (5%)

Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
           +        +   + + WD   ++   N G RID+I+ S         + I     G   
Sbjct: 272 WDLCRCFHPERAGMNTCWDTKRNTRPANNGSRIDYILCSDGIKDWFTFSNIQEGLMG--- 328

Query: 251 PSDHTPVIVSL 261
            SDH PV  + 
Sbjct: 329 -SDHCPVFATF 338



 Score = 50.2 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 25/79 (31%), Gaps = 24/79 (30%)

Query: 5  TVATWN----------------VNSIRA-------RIHN-LAAWIKENNPDIICLQETKT 40
           + TWN                VN IR        R      A       DI+ +QETK 
Sbjct: 4  RLTTWNGETPLKLQDSPAYTFTVNGIRNPFGYQPWREKRTFQAMFDILEADIVVMQETKI 63

Query: 41 EDKNFPFETLQSLNYHIET 59
          + K+   E +    + +  
Sbjct: 64 QRKDLHDEMVLVPGWDVFF 82


>gi|14578320|gb|AAF99486.1| PV1H14200_P [Plasmodium vivax]
          Length = 540

 Score = 76.0 bits (185), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 57/353 (16%), Positives = 93/353 (26%), Gaps = 97/353 (27%)

Query: 5   TVATWNVNSIRARIHN------LAAWIKENNPDIICLQETKT------------------ 40
           T+ TWN+NSI  R  N        ++    N D++C QE +                   
Sbjct: 167 TIVTWNMNSITVRYKNKDKWNAFMSFFNRINADVLCFQEVRLPALNLCAVKNSKEGKRDR 226

Query: 41  -------EDKNFPFET--------LQSLN-YHIETCGQKSYNGVAILSKYQPIEIVTHLP 84
                  +     F+           + N Y      + S   V I        I  +L 
Sbjct: 227 GKVKNTDQKSQVDFDIMSKILKKDFHNYNAYFSLANIKYSGQLVLIKRNIPVKSIRYNLR 286

Query: 85  GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL 144
            D    +                + + Y P+     + K++ +  + ++  +F S    +
Sbjct: 287 LDADPSEHHEEGRVIIAEFSKFYLLSTYTPNNGF-DTVKFERRRLFDEQLKKFVSHLRNM 345

Query: 145 EEPLIFAGDYNIIPQPH---DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT 201
            + LI+ GD NI P+             +        V Q             I +  D 
Sbjct: 346 GKNLIWTGDLNIAPEDIDLSHPAEFRRMKKGNVPKEFVGQPGCTDFERKNFMGILSAGDL 405

Query: 202 HHLYSFWDYYADSW-------SKNKG------------------------------IR-- 222
              Y        +          NKG                               R  
Sbjct: 406 VDSYRQLAGKGKAKKGEASKGETNKGETSKGGSCNGGSCNGAATNGAPDINDNIYTWRCP 465

Query: 223 ------------IDHIMLSPEATSLLHSARID--TKPRGWTKPSDHTPVIVSL 261
                       IDH ++S      + S  I   +        SDH PVI+ L
Sbjct: 466 FLMGKSCNKAMRIDHFIVSRGFMPNVQSVDIHGYSVFHKNFYGSDHCPVILHL 518


>gi|325094515|gb|EGC47825.1| conserved hypothetical protein [Ajellomyces capsulatus H88]
          Length = 636

 Score = 75.6 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 27/69 (39%), Gaps = 4/69 (5%)

Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253
             +   D   +Y+ W+   ++   N G RID+++          ++ I     G    SD
Sbjct: 263 CRKYHPDRLGMYTCWEQRVNARPGNYGARIDYVLCDRSMQDWFSASNIQEGLMG----SD 318

Query: 254 HTPVIVSLD 262
           H PV   L 
Sbjct: 319 HCPVYAELK 327



 Score = 63.7 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 31/87 (35%), Gaps = 8/87 (9%)

Query: 3  VVTVATWNVNSIRA-------RIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
          +V + TWNVN IR        R      A       DI+  QETK + K+   + +    
Sbjct: 1  MVRLTTWNVNGIRNPFSYHPWREKRSFEAMFDALEADIVIFQETKIQRKDLQDDMVLVNG 60

Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVT 81
          +       K   G + +  Y    I  
Sbjct: 61 WDCFFSLPKYKKGYSGVVIYTRNSICC 87


>gi|240275156|gb|EER38671.1| conserved hypothetical protein [Ajellomyces capsulatus H143]
          Length = 636

 Score = 75.6 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 27/69 (39%), Gaps = 4/69 (5%)

Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253
             +   D   +Y+ W+   ++   N G RID+++          ++ I     G    SD
Sbjct: 263 CRKYHPDRLGMYTCWEQRVNARPGNYGARIDYVLCDRSMQDWFSASNIQEGLMG----SD 318

Query: 254 HTPVIVSLD 262
           H PV   L 
Sbjct: 319 HCPVYAELK 327



 Score = 63.7 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 31/87 (35%), Gaps = 8/87 (9%)

Query: 3  VVTVATWNVNSIRA-------RIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
          +V + TWNVN IR        R      A       DI+  QETK + K+   + +    
Sbjct: 1  MVRLTTWNVNGIRNPFSYHPWREKRSFEAMFDALEADIVIFQETKIQRKDLQDDMVLVNG 60

Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVT 81
          +       K   G + +  Y    I  
Sbjct: 61 WDCFFSLPKYKKGYSGVVIYTRNSICC 87


>gi|225558763|gb|EEH07047.1| DNA lyase Apn2 [Ajellomyces capsulatus G186AR]
          Length = 636

 Score = 75.6 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 27/69 (39%), Gaps = 4/69 (5%)

Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253
             +   D   +Y+ W+   ++   N G RID+++          ++ I     G    SD
Sbjct: 263 CRKYHPDRLGMYTCWEQRVNARPGNYGARIDYVLCDRSMQDWFSASNIQEGLMG----SD 318

Query: 254 HTPVIVSLD 262
           H PV   L 
Sbjct: 319 HCPVYAELK 327



 Score = 63.7 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 31/87 (35%), Gaps = 8/87 (9%)

Query: 3  VVTVATWNVNSIRA-------RIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
          +V + TWNVN IR        R      A       DI+  QETK + K+   + +    
Sbjct: 1  MVRLTTWNVNGIRNPFSYHPWREKRSFEAMFDALEADIVIFQETKIQRKDLQDDMVLVNG 60

Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVT 81
          +       K   G + +  Y    I  
Sbjct: 61 WDCFFSLPKYKKGYSGVVIYTRNSICC 87


>gi|327306001|ref|XP_003237692.1| DNA lyase [Trichophyton rubrum CBS 118892]
 gi|326460690|gb|EGD86143.1| DNA lyase [Trichophyton rubrum CBS 118892]
          Length = 603

 Score = 75.6 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 27/68 (39%), Gaps = 4/68 (5%)

Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253
                     +Y+ W+   ++   N G RID+I+ S    S    + I     G    SD
Sbjct: 259 CREFHPGRTGMYTCWNQKVNARPGNYGSRIDYILCSDNIRSWFVESNIQEGLMG----SD 314

Query: 254 HTPVIVSL 261
           H PV  S+
Sbjct: 315 HCPVYASI 322



 Score = 52.1 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 22/65 (33%), Gaps = 8/65 (12%)

Query: 3  VVTVATWNVNSIRARI--------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
          V+ + TWNVN IR                       DI+  QE K + K+   + +    
Sbjct: 2  VLRLTTWNVNGIRNPFSYEPWRGNRTFGTMFDILEADIVVFQEAKIQRKDLQDDMVLVSG 61

Query: 55 YHIET 59
          +    
Sbjct: 62 WDCYF 66


>gi|253573925|ref|ZP_04851267.1| endonuclease/exonuclease/phosphatase [Paenibacillus sp. oral taxon
           786 str. D14]
 gi|251846402|gb|EES74408.1| endonuclease/exonuclease/phosphatase [Paenibacillus sp. oral taxon
           786 str. D14]
          Length = 258

 Score = 75.6 bits (184), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 44/267 (16%), Positives = 74/267 (27%), Gaps = 27/267 (10%)

Query: 5   TVATWNV------NSIRA---RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55
            + T+N+      +   A   R   +A  IK ++ DII +QE    D     E L     
Sbjct: 4   KIMTFNLRLNVASDGENAWPYRTKAVAEVIKRHDADIIGIQE-GLHDMLTDLEPLLPEYA 62

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
            I    +    G      Y+         G     +        + +T   R+       
Sbjct: 63  WIGEGREGGNKGEYAAILYKKKNWTVGKAGHFSLSETPEELGARSWSTSHPRMCTWVTFK 122

Query: 116 GNP-ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ-PHDCYNPIIWENDA 173
                    ++  +  I    +     L  E    F     +      D           
Sbjct: 123 SQTGAEFAAFNTHLDHISEEAQQKGMELIRERMKEFRTQTGLPVVLTGDFNVEPANAVIT 182

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
               E  ++   +      +     H      S             G  ID+I +SP+  
Sbjct: 183 GLEQEGYRNAYSVLQQEKKEVGATVHHFLGGES-------------GEPIDYIFVSPDL- 228

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVS 260
             + + R+D +      PSDH PVI  
Sbjct: 229 -QIQNVRVDRELYEGRYPSDHYPVIAE 254


>gi|254518532|ref|ZP_05130588.1| endonuclease/exonuclease/phosphatase [Clostridium sp. 7_2_43FAA]
 gi|226912281|gb|EEH97482.1| endonuclease/exonuclease/phosphatase [Clostridium sp. 7_2_43FAA]
          Length = 265

 Score = 75.2 bits (183), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 45/269 (16%), Positives = 79/269 (29%), Gaps = 21/269 (7%)

Query: 4   VTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           + V T+N+         N    R   +   +  N+ DII +QE    +K F   + ++  
Sbjct: 1   MKVMTFNLRTDFLLDINNRWNKRKEIVYDILNNNDCDIIGVQE--LNNKMFKDISKEAPG 58

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           Y+I      S   +    +   I +       +        +     +     +      
Sbjct: 59  YNII----GSPRSLKYFIERNDILVSKKHKILEYSTFWLSEDPEKIGSAIWYSVYPRICT 114

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
                 +   D  I  +             E  L   G+Y       D Y  I    D  
Sbjct: 115 TALIRLN---DGNIVRVYNTHLDFLLSKAREYGLKKIGEYMDKQHEKDNYPAI-LMGDFN 170

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
            +   +      +    +    A  D           +      KG+ ID+I ++ E   
Sbjct: 171 ASPTSKAIKNFSEGKYSSKKFIAVQDHKKEIYNMSTMSKFKGNKKGLHIDYIFVTEEF-- 228

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            +    I    +    PSDH P+I  LDI
Sbjct: 229 KVLDTEILEYNKNGKYPSDHYPMIAKLDI 257


>gi|322709548|gb|EFZ01124.1| DNA lyase [Metarhizium anisopliae ARSEF 23]
          Length = 608

 Score = 75.2 bits (183), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 5/71 (7%)

Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
            D  R  H +   + + WD   ++   N G RID+I+ S         A I     G   
Sbjct: 232 WDLCRCFHPSRLGMNTCWDTKKNTRPANNGSRIDYILCSNGIRDWFTWANIQEGLMG--- 288

Query: 251 PSDHTPVIVSL 261
            SDH PV  ++
Sbjct: 289 -SDHCPVFATI 298


>gi|226294616|gb|EEH50036.1| DNA-(apurinic or apyrimidinic site) lyase [Paracoccidioides
           brasiliensis Pb18]
          Length = 621

 Score = 75.2 bits (183), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 27/69 (39%), Gaps = 4/69 (5%)

Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253
                 D   +Y+ W+   ++   N G RID+++ S        ++ I     G    SD
Sbjct: 258 CREYHPDRRGMYTCWEQRVNARPGNYGSRIDYVLCSLIMRDWFCASNIQEGLMG----SD 313

Query: 254 HTPVIVSLD 262
           H PV   + 
Sbjct: 314 HCPVYADIK 322


>gi|295663072|ref|XP_002792089.1| DNA-(apurinic or apyrimidinic site) lyase [Paracoccidioides
           brasiliensis Pb01]
 gi|226279264|gb|EEH34830.1| DNA-(apurinic or apyrimidinic site) lyase [Paracoccidioides
           brasiliensis Pb01]
          Length = 570

 Score = 75.2 bits (183), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 27/69 (39%), Gaps = 4/69 (5%)

Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253
                 D   +Y+ W+   ++   N G RID+++ S        ++ I     G    SD
Sbjct: 201 CREYHPDRRGMYTCWEQRVNARPGNYGSRIDYVLCSLIMRDWFCASNIQEGLMG----SD 256

Query: 254 HTPVIVSLD 262
           H PV   + 
Sbjct: 257 HCPVYADIK 265


>gi|225685280|gb|EEH23564.1| DNA-(apurinic or apyrimidinic site) lyase [Paracoccidioides
           brasiliensis Pb03]
          Length = 510

 Score = 75.2 bits (183), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 27/69 (39%), Gaps = 4/69 (5%)

Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253
                 D   +Y+ W+   ++   N G RID+++ S        ++ I     G    SD
Sbjct: 147 CREYHPDRRGMYTCWEQRVNARPGNYGSRIDYVLCSLIMRDWFCASNIQEGLMG----SD 202

Query: 254 HTPVIVSLD 262
           H PV   + 
Sbjct: 203 HCPVYADIK 211


>gi|50290925|ref|XP_447895.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49527206|emb|CAG60844.1| unnamed protein product [Candida glabrata]
          Length = 505

 Score = 75.2 bits (183), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 4/64 (6%)

Query: 200 DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
           D   +Y+ W+   ++   N G RID I++S +  + +  A I     G    SDH PV  
Sbjct: 301 DRLKMYTVWNTLKNTRPSNFGSRIDFILVSKDLGNNIEKADILPDING----SDHCPVFC 356

Query: 260 SLDI 263
            +++
Sbjct: 357 DINL 360



 Score = 44.4 bits (103), Expect = 0.017,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 21/51 (41%), Gaps = 15/51 (29%)

Query: 4  VTVATWNVNSIRA------------RIHNLAAWIKENNPDIICLQETKTED 42
          +   T+NVN +R              + ++  W +    D+I  QE KTE 
Sbjct: 12 IRFVTFNVNGVRTFFHYAPFSEMRQSLRSVFDWFES---DVITFQELKTEP 59


>gi|227202652|dbj|BAH56799.1| AT4G36050 [Arabidopsis thaliana]
          Length = 409

 Score = 75.2 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 38/114 (33%), Gaps = 30/114 (26%)

Query: 198 THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE-------------ATSLLHSARIDTK 244
             +    ++ W   + +   N G RIDHI+++                   +    I T+
Sbjct: 38  HPERKDAFTCWSSSSGAEQFNYGSRIDHILVAGSCLHQDEDKQGHSFLACHVKECDILTE 97

Query: 245 ---------PRGWT-------KPSDHTPVIVSL-DIPEPRKKQQDSTSQNMKPI 281
                    P  W        K SDH PV +S  D+P+  +      +    P+
Sbjct: 98  YKRFKNENMPTRWKGGLVTKFKGSDHVPVFISFDDLPDIPEHSTPPLASRYLPM 151


>gi|22329202|ref|NP_195329.2| endonuclease/exonuclease/phosphatase family protein [Arabidopsis
           thaliana]
 gi|17064948|gb|AAL32628.1| putative protein [Arabidopsis thaliana]
 gi|20259962|gb|AAM13328.1| putative protein [Arabidopsis thaliana]
          Length = 408

 Score = 75.2 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 38/114 (33%), Gaps = 30/114 (26%)

Query: 198 THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE-------------ATSLLHSARIDTK 244
             +    ++ W   + +   N G RIDHI+++                   +    I T+
Sbjct: 38  HPERKDAFTCWSSSSGAEQFNYGSRIDHILVAGSCLHQDEDKQGHSFLACHVKECDILTE 97

Query: 245 ---------PRGWT-------KPSDHTPVIVSL-DIPEPRKKQQDSTSQNMKPI 281
                    P  W        K SDH PV +S  D+P+  +      +    P+
Sbjct: 98  YKRFKNENMPTRWKGGLVTKFKGSDHVPVFISFDDLPDIPEHSTPPLASRYLPM 151


>gi|255945069|ref|XP_002563302.1| Pc20g07790 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211588037|emb|CAP86108.1| Pc20g07790 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 655

 Score = 75.2 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 31/87 (35%), Gaps = 4/87 (4%)

Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253
                     +Y+ WD   ++   N G RID+++ S         + I     G    SD
Sbjct: 280 CRSFHPHRTGMYTCWDQKLNARPGNYGSRIDYVLCSLHMQDWFSDSNIQEGLMG----SD 335

Query: 254 HTPVIVSLDIPEPRKKQQDSTSQNMKP 280
           H PV   +     R + + +    + P
Sbjct: 336 HCPVYAVIKESVNRPEGEVNIRDILNP 362



 Score = 59.8 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 23/63 (36%), Gaps = 8/63 (12%)

Query: 5  TVATWNVNSIRARI--------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56
           + TWNVN IR               +       DI+ LQETK + K+   + +    + 
Sbjct: 4  RITTWNVNGIRNPFSYEPWRGTRTFESMFDTLEADIVILQETKIQRKDLRDDMVLVPGWD 63

Query: 57 IET 59
             
Sbjct: 64 CYF 66


>gi|156056543|ref|XP_001594195.1| hypothetical protein SS1G_04002 [Sclerotinia sclerotiorum 1980]
 gi|154701788|gb|EDO01527.1| hypothetical protein SS1G_04002 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 501

 Score = 75.2 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 5/73 (6%)

Query: 191 FTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT 249
             D  R  H     +++ W+   ++   N G RID+I+ S +       + I     G  
Sbjct: 228 MWDVCRGFHPARKKMFTCWEQKKNARPGNFGSRIDYILCSEDRKEWFQESNIQEGLMG-- 285

Query: 250 KPSDHTPVIVSLD 262
             SDH PV  +L 
Sbjct: 286 --SDHCPVFATLK 296



 Score = 39.0 bits (89), Expect = 0.75,   Method: Composition-based stats.
 Identities = 10/62 (16%), Positives = 25/62 (40%), Gaps = 3/62 (4%)

Query: 19 HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIE 78
            +   ++    DI+ +QETK + K+   + +    + +     K   G + ++ Y    
Sbjct: 3  KTMFDILET---DILVMQETKIQRKDLRDDMVLVSGWDVFFSLPKHKKGYSGVAIYTRNS 59

Query: 79 IV 80
          + 
Sbjct: 60 VC 61


>gi|146318325|ref|YP_001198037.1| exonuclease III [Streptococcus suis 05ZYH33]
 gi|145689131|gb|ABP89637.1| Exonuclease III [Streptococcus suis 05ZYH33]
          Length = 168

 Score = 75.2 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 10/165 (6%)

Query: 100 TINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159
           T+      +  +Y P+         D +I  ++        +L+  +P++  GDYN+  +
Sbjct: 9   TLEFDDFYVTQVYTPNAGDGLKRLADRQIWDVQ--YADYLAKLDSHKPVLATGDYNVAHK 66

Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYAD-SWSK 217
             D  NP        FT E RQ F  L   GFTD  R  H D  + Y++W   +  S   
Sbjct: 67  EIDLANPASNRQSPGFTDEERQGFTNLLAKGFTDTFRHLHGDVLNAYTWWAQRSRTSKIN 126

Query: 218 NKGIRIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSL 261
           N G RID+ ++S      +  +  ID+  R      DHTP+++ +
Sbjct: 127 NTGWRIDYWLVSDRIADKVSKSDMIDSGARQ-----DHTPIVMEI 166


>gi|256681296|gb|ACV05011.1| catabolite repression control protein [Pseudomonas aeruginosa]
          Length = 180

 Score = 74.8 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/150 (20%), Positives = 56/150 (37%), Gaps = 5/150 (3%)

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI-IWENDA 173
                     + K  ++  F  + S++       I+ G   +  Q  D  N     +   
Sbjct: 31  PSGQSGDESLNQKFKFMDDFTHYLSKQRRKRREYIYCGSLYVAHQKMDVKNWRECQQMPG 90

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
               E     +   N+G+ DA+R        +S+W     +   N G R D+ +L+P   
Sbjct: 91  FLAPERAWLDEVFGNLGYADALREVSREGDQFSWWPDSEQAEMLNLGWRFDYQVLTPGLR 150

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             + +A++  +PR     S H P+IV  D 
Sbjct: 151 RFVRNAKLPRQPR----FSQHAPLIVDYDW 176


>gi|269861776|ref|XP_002650574.1| exodeoxyribonuclease III [Enterocytozoon bieneusi H348]
 gi|269867018|ref|XP_002652463.1| exodeoxyribonuclease III [Enterocytozoon bieneusi H348]
 gi|220062443|gb|EED41593.1| exodeoxyribonuclease III [Enterocytozoon bieneusi H348]
 gi|220065939|gb|EED43484.1| exodeoxyribonuclease III [Enterocytozoon bieneusi H348]
          Length = 151

 Score = 74.8 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/117 (23%), Positives = 43/117 (36%), Gaps = 4/117 (3%)

Query: 150 FAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWD 209
           +             Y    ++    F  + ++ +       F D  R  +     Y+ WD
Sbjct: 12  YTEKVAPRIDELPVYFLTKYDLYDHFMEKRQRQWLANLMKTFVDTFRIGNKELFQYTCWD 71

Query: 210 YYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEP 266
                   N G RID+I+L   +   + SA I     G    SDH PV + +DI EP
Sbjct: 72  RVLRHRESNLGTRIDYILLKTTSHYKIKSAEIRPDIYG----SDHCPVTLEIDIGEP 124


>gi|242813026|ref|XP_002486082.1| DNA lyase Apn2 [Talaromyces stipitatus ATCC 10500]
 gi|218714421|gb|EED13844.1| DNA lyase Apn2 [Talaromyces stipitatus ATCC 10500]
          Length = 642

 Score = 74.8 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 26/72 (36%), Gaps = 4/72 (5%)

Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
                        +Y+ W+   ++   N G RID+I+ S +       A I     G   
Sbjct: 272 HDICRSFHPGRRGMYTCWETRVNARPGNYGARIDYILSSLDMKDWWSEANIQEGLMG--- 328

Query: 251 PSDHTPVIVSLD 262
            SDH PV  +  
Sbjct: 329 -SDHCPVYATFK 339



 Score = 39.0 bits (89), Expect = 0.67,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 21/61 (34%)

Query: 21  LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80
             A       DI+  QETK + K+   + +    +       +   G + +  Y   E  
Sbjct: 45  FNAMFDILEADIVIFQETKIQRKDLRDDMVLVPGWDCYFSLPRHKKGYSGVVIYTRNETC 104

Query: 81  T 81
           T
Sbjct: 105 T 105


>gi|269865638|ref|XP_002651994.1| exodeoxyribonuclease III [Enterocytozoon bieneusi H348]
 gi|220063354|gb|EED42062.1| exodeoxyribonuclease III [Enterocytozoon bieneusi H348]
          Length = 151

 Score = 74.8 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/117 (23%), Positives = 43/117 (36%), Gaps = 4/117 (3%)

Query: 150 FAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWD 209
           +             Y    ++    F  + ++ +       F D  R  +     Y+ WD
Sbjct: 12  YTEKVAPRIDELPVYFLTKYDLYDHFMEKRQRQWLANLMKTFVDTFRVGNKELFQYTCWD 71

Query: 210 YYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEP 266
                   N G RID+I+L   +   + SA I     G    SDH PV + +DI EP
Sbjct: 72  RVLRHRESNLGTRIDYILLKTTSHYKIKSAEIRPDIYG----SDHCPVTLEIDIGEP 124


>gi|262196690|ref|YP_003267899.1| endonuclease/exonuclease/phosphatase [Haliangium ochraceum DSM
           14365]
 gi|262080037|gb|ACY16006.1| Endonuclease/exonuclease/phosphatase [Haliangium ochraceum DSM
           14365]
          Length = 285

 Score = 74.8 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 37/280 (13%), Positives = 77/280 (27%), Gaps = 17/280 (6%)

Query: 4   VTVATWNVNS----IRARIHNLAAWIKENNPDIICLQETK-TEDKNFPFETL-QSLNYHI 57
           + V T N+      +  R+   A  ++    D++ LQE +   D       L ++L +  
Sbjct: 1   MRVVTLNLWGTTPPLATRLALAAEQLRALAVDVVALQEVRHAGDGRTTAAHLAEALGFQH 60

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTH---LPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
                  +                    +       + R +       T+   + +  + 
Sbjct: 61  HYAAAVRWTAEDWPEDVPGAGAGEEGLAILSRHGLAECRALALPEARPTEARILLSAAID 120

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
                           +   L    Q L ++  L              C +     +   
Sbjct: 121 APAGRCWVHTTHLHYALDDGLARERQVLAIDHALRACAAEEPAAVHILCGDFNAEPDSDE 180

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK---NKGIRIDHIMLSPE 231
                       +   F DA    H      ++      + ++   ++  R+D+I +S  
Sbjct: 181 MRFLRGLCTLAGRRSYFQDAFAHRHPGEDGVTWCTERGAARARRSMDRDRRLDYIYVSKR 240

Query: 232 ATS---LLHSARIDTKPRGWT-KPSDHTPVIVSLDI-PEP 266
                  +  AR+    R      SDH  V+  + I P P
Sbjct: 241 QRDGRGTVREARVVLGGRSGEVAASDHYGVLADVQIAPAP 280


>gi|254580459|ref|XP_002496215.1| ZYRO0C13222p [Zygosaccharomyces rouxii]
 gi|238939106|emb|CAR27282.1| ZYRO0C13222p [Zygosaccharomyces rouxii]
          Length = 500

 Score = 74.8 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 6/79 (7%)

Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS-- 260
            +Y+ W+ + +S   N G RID ++ S      + SA I  +  G    SDH PV     
Sbjct: 304 KMYTVWNTFKNSRPANYGSRIDFVLTSTRMGVQVQSANILPQVMG----SDHCPVYADII 359

Query: 261 LDIPEPRKKQQDSTSQNMK 279
            D  +  +K  D  +   +
Sbjct: 360 YDPSDVGEKDFDVKTPKFE 378



 Score = 47.5 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 30/93 (32%), Gaps = 17/93 (18%)

Query: 5   TVATWNVNSIRA------------RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52
              T+NVN +R              I N+  +    N DII  QE K E           
Sbjct: 17  RFLTFNVNGLRTLFHYQPFSNMNQSIENVFDYF---NADIITFQELKVERSALTKWGKLD 73

Query: 53  LNYHIETCGQKS--YNGVAILSKYQPIEIVTHL 83
             Y   +  Q    Y+GV    +  P +   H 
Sbjct: 74  NFYSFISIPQARKGYSGVGCWIRILPKDHPLHN 106


>gi|83593356|ref|YP_427108.1| endonuclease/exonuclease/phosphatase [Rhodospirillum rubrum ATCC
           11170]
 gi|83576270|gb|ABC22821.1| Endonuclease/exonuclease/phosphatase [Rhodospirillum rubrum ATCC
           11170]
          Length = 246

 Score = 74.8 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 42/264 (15%), Positives = 84/264 (31%), Gaps = 38/264 (14%)

Query: 3   VVTVATWNV--NSIRARIHNLAAWIKENNPDIICLQETKTED-KNFPFETLQSLN--YHI 57
           ++ V  WN+     R R+  +   I  + PD++ L E + +         L+ +   Y  
Sbjct: 11  LIRVVCWNILHGGGR-RVDAILTRIVRHRPDVLILTEFRNDASGQRLRAGLRDIGLWYEH 69

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
                K+ NGV I ++     +        LD   R            L +  +Y+P G 
Sbjct: 70  FVPTHKTSNGVLIAARDYVDAVQ------PLDTTVRKPHLLLEGLVAGLSVIGVYMPMGE 123

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
             T        +  +R         +      F  +                        
Sbjct: 124 AKTPYWEAVVAAARRREASPTLVIGDFNTGKHFIDEKGTSLV------------------ 165

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
                  +++  GF D  RA +     ++++ +  + +      R+DH   SP   + + 
Sbjct: 166 -SAPFMNRMEEAGFVDLWRARNPEGREFTWFSHKGNGF------RLDHAFASPSLAARVT 218

Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261
                   R   + SDH+ +I+ +
Sbjct: 219 DVFYSHAER-LDRISDHSALILDI 241


>gi|281346665|gb|EFB22249.1| hypothetical protein PANDA_000067 [Ailuropoda melanoleuca]
          Length = 343

 Score = 74.8 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 47/264 (17%), Positives = 82/264 (31%), Gaps = 32/264 (12%)

Query: 18  IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPI 77
            H +A WIK ++P I CLQET  E K+     ++  +      G +   GVAIL   +  
Sbjct: 3   RHRVADWIKRHDPSICCLQETHFEPKDAFRLRVRGWSTIFHANGPQKKAGVAILISDRLD 62

Query: 78  EIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF 137
                          +            + +          I +    ++ +        
Sbjct: 63  F--------------KLEAIERDTEGHYIILKGSIQQVDMTIINIYAPNRGAARYTSQLL 108

Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA 197
              +  +++  +  GD N      D               E +     L  +   D  R 
Sbjct: 109 TKIKRHIDKNTVIVGDLNTPLSEIDRTPWQKLSK------ESKALNAILDELDLIDIYRT 162

Query: 198 THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257
            H     YSF+     ++S     RIDH +      S      I          SDH  +
Sbjct: 163 LHPRTKEYSFYSNAHGTFS-----RIDHALGHKTGLSQYQKIEIIPCI-----FSDHNAL 212

Query: 258 IVSLDIPEPRKKQQDSTSQNMKPI 281
            + L+     K  ++S +  ++ I
Sbjct: 213 KLELN--HKEKPGRNSNTWRLRTI 234


>gi|281345771|gb|EFB21355.1| hypothetical protein PANDA_015321 [Ailuropoda melanoleuca]
          Length = 341

 Score = 74.8 bits (182), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 47/264 (17%), Positives = 82/264 (31%), Gaps = 32/264 (12%)

Query: 18  IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPI 77
            H +A WIK ++P I CLQET  E K+     ++  +      G +   GVAIL   +  
Sbjct: 1   RHRVADWIKRHDPSICCLQETHFEPKDAFRLRVRGWSTIFHANGPQKKAGVAILISDRLD 60

Query: 78  EIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF 137
                          +            + +          I +    ++ +        
Sbjct: 61  F--------------KLEAIERDTEGHYIILKGSIQQVDMTIINIYAPNRGAARYTSQLL 106

Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA 197
              +  +++  +  GD N      D               E +     L  +   D  R 
Sbjct: 107 TKIKRHIDKNTVIVGDLNTPLSEIDRTPWQKLSK------ESKALNAILDELDLIDIYRT 160

Query: 198 THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257
            H     YSF+     ++S     RIDH +      S      I          SDH  +
Sbjct: 161 LHPRTKEYSFYSNAHGTFS-----RIDHALGHKTGLSQYQKIEIIPCI-----FSDHNAL 210

Query: 258 IVSLDIPEPRKKQQDSTSQNMKPI 281
            + L+     K  ++S +  ++ I
Sbjct: 211 KLELN--HKEKPGRNSNTWRLRTI 232


>gi|16904257|gb|AAL30837.1|AF440399_1 DNA lyase [Mycosphaerella graminicola]
          Length = 491

 Score = 74.4 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 4/71 (5%)

Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
           +            +Y+ WD   ++   N G RID ++++    S +  A I     G   
Sbjct: 135 WDTTRGFHPTRRGMYTHWDTKKNARPGNSGSRIDFVLVADVMQSWVKDANIQEGLLG--- 191

Query: 251 PSDHTPVIVSL 261
            SDH PV    
Sbjct: 192 -SDHCPVYADF 201


>gi|16904254|gb|AAL30835.1|AF440398_3 DNA lyase-like protein [Mycosphaerella graminicola]
          Length = 594

 Score = 74.4 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 4/71 (5%)

Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
           +            +Y+ WD   ++   N G RID ++++    S +  A I     G   
Sbjct: 252 WDTTRGFHPTRRGMYTHWDTKKNARPGNSGSRIDFVLVADVMQSWVKDANIQEGLLG--- 308

Query: 251 PSDHTPVIVSL 261
            SDH PV    
Sbjct: 309 -SDHCPVYADF 318



 Score = 58.3 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 27/67 (40%), Gaps = 14/67 (20%)

Query: 4  VTVATWNVNSIR----------AR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52
          + + TWNVN IR           R   ++   ++    DI+ +QE K + K+   + +  
Sbjct: 1  MRLTTWNVNGIRNPFSYPPWNNTRSFKSMFDILES---DIVVMQELKIQKKDLRDDMVLV 57

Query: 53 LNYHIET 59
            +    
Sbjct: 58 DGWDCYF 64


>gi|82913353|ref|XP_728609.1| endonuclease/exonuclease/phosphatase [Plasmodium yoelii yoelii str.
           17XNL]
 gi|23485048|gb|EAA20174.1| Endonuclease/Exonuclease/phosphatase family [Plasmodium yoelii
           yoelii]
          Length = 245

 Score = 74.4 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 47/258 (18%), Positives = 79/258 (30%), Gaps = 32/258 (12%)

Query: 6   VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + N+N + + I    L  W+ + +P   CLQET   +K+  +  ++      +  G K
Sbjct: 17  LISLNINGLNSPIKRHRLTNWLHKQDPTFCCLQETHLREKDRHYLRIKGWKTIFQANGMK 76

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
              GVAIL   +                              + I    L     I +  
Sbjct: 77  KQAGVAILISDKIDFQPK--------------VIKKDKEGHFVLIKGKILQEELSILNIY 122

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
             +  +           +  +    I  GD+N    P D         D     EV +  
Sbjct: 123 APNTRAATFIKETLVKLKAHIAPHTIIVGDFNTPLSPMDRSWKQKLNRDTLKLTEVMKQM 182

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
                   TD  R  +     Y+F+     ++SK     IDHI+      +   +  I  
Sbjct: 183 ------DLTDIYRTFYPKTKGYTFFSAPHGTFSK-----IDHIIGHKTGLNRFKNIEIVP 231

Query: 244 KPRGWTKPSDHTPVIVSL 261
                   SDH  +   L
Sbjct: 232 CIL-----SDHHALRADL 244


>gi|194376980|dbj|BAG63051.1| unnamed protein product [Homo sapiens]
          Length = 347

 Score = 74.4 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/148 (15%), Positives = 43/148 (29%), Gaps = 18/148 (12%)

Query: 145 EEPLIFAGDYNIIPQPHDCY-----------NPIIWENDACFTLEVRQSFQKLQNMGFTD 193
              +I  GD N   +P D +               W +     L  + +      +    
Sbjct: 18  GSHVIILGDLNTAHRPIDHWDAVNLECFEEDPGRKWMDSLLSNLGCQSASHVGPFIDSYR 77

Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT-SLLHSARIDTKPRGWTKPS 252
             +        ++ W     +   N G R+D+++           ++ +  +  G    S
Sbjct: 78  CFQP--KQEGAFTCWSAVTGARHLNYGSRLDYVLGDRTLVIDTFQASFLLPEVMG----S 131

Query: 253 DHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
           DH PV   L +     KQ         P
Sbjct: 132 DHCPVGAVLSVSSVPAKQCPPLCTRFLP 159


>gi|119613616|gb|EAW93210.1| APEX nuclease (apurinic/apyrimidinic endonuclease) 2, isoform CRA_c
           [Homo sapiens]
 gi|221045760|dbj|BAH14557.1| unnamed protein product [Homo sapiens]
          Length = 347

 Score = 74.4 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/148 (15%), Positives = 43/148 (29%), Gaps = 18/148 (12%)

Query: 145 EEPLIFAGDYNIIPQPHDCY-----------NPIIWENDACFTLEVRQSFQKLQNMGFTD 193
              +I  GD N   +P D +               W +     L  + +      +    
Sbjct: 18  GSHVIILGDLNTAHRPIDHWDAVNLECFEEDPGRKWMDSLLSNLGCQSASHVGPFIDSYR 77

Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT-SLLHSARIDTKPRGWTKPS 252
             +        ++ W     +   N G R+D+++           ++ +  +  G    S
Sbjct: 78  CFQP--KQEGAFTCWSAVTGARHLNYGSRLDYVLGDRTLVIDTFQASFLLPEVMG----S 131

Query: 253 DHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
           DH PV   L +     KQ         P
Sbjct: 132 DHCPVGAVLSVSSVPAKQCPPLCTRFLP 159


>gi|299471767|emb|CBN76988.1| ARP; DNA-(apurinic or apyrimidinic site) lyase [Ectocarpus
           siliculosus]
          Length = 479

 Score = 74.4 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 4/70 (5%)

Query: 198 THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT--SLLHSARIDTKPRGWTKPSDHT 255
                 ++S+W   A +   N+G+R+D+ + S        +H A +    R     SDH 
Sbjct: 408 HPKVTGVFSYWSVRARNRPVNRGMRLDYCLASRGLVGGDGVHDAFVLD--RDTVGVSDHC 465

Query: 256 PVIVSLDIPE 265
           PV V L + +
Sbjct: 466 PVGVVLRLGD 475



 Score = 55.9 bits (133), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 6/44 (13%)

Query: 4   VTVATWNVNSIRARI------HNLAAWIKENNPDIICLQETKTE 41
           + V +WNVN IRA++        L   I +  P ++ LQE +T 
Sbjct: 127 LRVLSWNVNGIRAQMDKEEGRKALQGIIAQERPHVLGLQEIRTS 170


>gi|119613614|gb|EAW93208.1| APEX nuclease (apurinic/apyrimidinic endonuclease) 2, isoform CRA_a
           [Homo sapiens]
          Length = 294

 Score = 74.4 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 15/96 (15%), Positives = 27/96 (28%), Gaps = 5/96 (5%)

Query: 186 LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT-SLLHSARIDTK 244
                              ++ W     +   N G R+D+++           ++ +  +
Sbjct: 15  HVGPFIDSYRCFQPKQEGAFTCWSAVTGARHLNYGSRLDYVLGDRTLVIDTFQASFLLPE 74

Query: 245 PRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
             G    SDH PV   L +     KQ         P
Sbjct: 75  VMG----SDHCPVGAVLSVSSVPAKQCPPLCTRFLP 106


>gi|121704746|ref|XP_001270636.1| ap endonuclease [Aspergillus clavatus NRRL 1]
 gi|119398782|gb|EAW09210.1| ap endonuclease [Aspergillus clavatus NRRL 1]
          Length = 620

 Score = 74.4 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 26/72 (36%), Gaps = 4/72 (5%)

Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
           F        +   +Y+ W+   ++   N G RID+++ S         + I     G   
Sbjct: 244 FDICRSFHPERRGMYTCWEQRINARPGNYGSRIDYVLCSLNTQDWFCDSNIQEGLMG--- 300

Query: 251 PSDHTPVIVSLD 262
            SDH PV     
Sbjct: 301 -SDHCPVYAVFK 311



 Score = 39.0 bits (89), Expect = 0.75,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 23/61 (37%), Gaps = 3/61 (4%)

Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80
          +   ++    DI+  QETK + K+   + +    +       K+  G + ++ Y      
Sbjct: 20 MFDILE---ADIVVFQETKIQRKDLRDDMVLVPGWDCYFSLPKAKKGYSGVAIYTRNATC 76

Query: 81 T 81
           
Sbjct: 77 C 77


>gi|316994995|gb|ADU79051.1| DNA lyase [Mycosphaerella graminicola]
          Length = 492

 Score = 74.1 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 4/71 (5%)

Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
           +            +Y+ WD   ++   N G RID ++++    S +  A I     G   
Sbjct: 135 WDTTRGFHPARRGMYTHWDTKKNARPGNSGSRIDFVLVADVMQSWVKDANIQEGLLG--- 191

Query: 251 PSDHTPVIVSL 261
            SDH PV    
Sbjct: 192 -SDHCPVYADF 201


>gi|165874707|gb|ABY68236.1| DNA lyase [Beauveria caledonica]
          Length = 559

 Score = 74.1 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 5/70 (7%)

Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
            D  R  H T   +++ WD    +   N G RID+I+ S    S    + I     G   
Sbjct: 220 WDICRCFHPTRLGMHTCWDAKRKTRPANVGSRIDYILCSDGLKSWFVESNIQEGLMG--- 276

Query: 251 PSDHTPVIVS 260
            SDH PV  +
Sbjct: 277 -SDHCPVYAT 285



 Score = 37.1 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 9/51 (17%), Positives = 20/51 (39%)

Query: 30 PDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80
           DI+ +QETK + K+   + +    +       +   G + ++ Y      
Sbjct: 3  ADIVIMQETKIQRKDLQDDMVLVPGWDAYFSLPQQKKGYSGVAIYTRNATC 53


>gi|291513858|emb|CBK63068.1| Exonuclease III [Alistipes shahii WAL 8301]
          Length = 318

 Score = 74.1 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/269 (14%), Positives = 69/269 (25%), Gaps = 27/269 (10%)

Query: 3   VVTVATWNV----------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52
            +   ++N+          N       N   W+KE +PD + L E     +         
Sbjct: 52  TLRFISYNILEGMKLDKAQN-----FDNFVDWVKEKDPDFMALCECNAFTEESLTALAGR 106

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
             +      ++S   V + SKY        L    L   A        I    + + +LY
Sbjct: 107 YGHPYAILCKESGFPVGLTSKYPIELRNRLLEDVPLWHGAIHTR----IKDINVVVLHLY 162

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                P          ++  R +           P+            +   +      +
Sbjct: 163 PFGTYPNGQGAAGTGNTYRDREINCILDSTIRRYPVEPLWLMAGDFNSYSPKDADAMPAN 222

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
             F            +       +  H     Y+               RID I  S   
Sbjct: 223 TYFETHSIVLKSGYCDALRDRHSQFFHTVPTPYNGESTADQ-------RRIDFIYASQAV 275

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
              +  +RI       T  SDH PV++  
Sbjct: 276 MREITDSRIIYDEFTAT-HSDHYPVMIEF 303


>gi|189467306|ref|ZP_03016091.1| hypothetical protein BACINT_03694 [Bacteroides intestinalis DSM
           17393]
 gi|189435570|gb|EDV04555.1| hypothetical protein BACINT_03694 [Bacteroides intestinalis DSM
           17393]
          Length = 293

 Score = 74.1 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 41/273 (15%), Positives = 72/273 (26%), Gaps = 26/273 (9%)

Query: 5   TVATWNV------NSIRARIHNLAAWIKENNPDIICLQET---KTEDKNFPFETLQSL-N 54
            + ++N+      +S+R        W KEN  DI+ L E    K  D     E L +L  
Sbjct: 28  KITSYNIWDGFDKDSLR--YERFVEWAKENEADILVLTELVGFKAHD----LEILGNLCG 81

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           Y      ++    + ++SK     +   + G    +          I T        +  
Sbjct: 82  YMHTALQKEDGYPLGVMSKTPIEVVCRRMEGFWHGMLHVRTAGIDVIATHLSPFDWKFRQ 141

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLE---LEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
               +  +  D             +        E         NI              +
Sbjct: 142 KEAKMIISYVDSLKLEDYFVAGDFNAISPLDADEIITHKTWIRNIKRGDASRPAYNNLND 201

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADS---WSKNKGIRIDHIML 228
                  +        +      +R         S + Y          +   R+D+I++
Sbjct: 202 GKFDLSVISSFLAAGMDDPIGRLVRPAEKRMTHPSAFRYRWKVEDERLPDLRSRLDYILV 261

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           SP          I          SDH PV + L
Sbjct: 262 SPSLMHRC----ILGVVERLEGISDHYPVSIVL 290


>gi|147814926|emb|CAN70311.1| hypothetical protein VITISV_022886 [Vitis vinifera]
          Length = 1856

 Score = 74.1 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/260 (11%), Positives = 71/260 (27%), Gaps = 32/260 (12%)

Query: 4    VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
            + + TWNV      ++   +  +I+    D++C+QETK ++                   
Sbjct: 891  MKIITWNVRGANDSSKRKIIXNYIRNQRVDLMCIQETKIQE------------------- 931

Query: 62   QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
                 G+              L  +              +       G   L        
Sbjct: 932  --MSEGIVRSLGSGRFLDWRALNAEGAAGGILICWDKRVLEILDWEEGQFSLSCRFKTIE 989

Query: 122  TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
                   + +        +    EE     G ++        +N  +++++         
Sbjct: 990  NGATWVFTGVYGPFTKVEREGMWEELGAIRGLWDDPWCLGGDFNITLFQHERSSQRRTSS 1049

Query: 182  SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSAR 240
            + ++         +         +++          N+   R+D  ++SP          
Sbjct: 1050 AMRRFAEFVDDLELVDLPLQGGEFTW-----SGGLNNQAWARLDRFLVSPSWLDQFSGV- 1103

Query: 241  IDTKPRGWTKPSDHTPVIVS 260
              T+ R     SDH P+++ 
Sbjct: 1104 --TQGRLSRPTSDHFPIVLE 1121


>gi|301628947|ref|XP_002943610.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like [Xenopus
           (Silurana) tropicalis]
          Length = 155

 Score = 74.1 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 3/102 (2%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFP--FETLQSLNYHIET 59
           +  + + N+N IR+     L  W+    PD IC+QE K +  +    FE L  L  H   
Sbjct: 5   LFKLTSLNLNGIRSATSKGLHDWVAAEQPDCICVQEIKAQATDMAGRFEQLAGLTGHFHF 64

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI 101
             +K Y+GV I +++ P +I+T     + D + R++E  F  
Sbjct: 65  AEKKGYSGVGIYTRHPPSDIITGFGPAEFDTEGRYVELRFDT 106


>gi|152965406|ref|YP_001361190.1| endonuclease/exonuclease/phosphatase [Kineococcus radiotolerans
           SRS30216]
 gi|151359923|gb|ABS02926.1| Endonuclease/exonuclease/phosphatase [Kineococcus radiotolerans
           SRS30216]
          Length = 291

 Score = 74.1 bits (180), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 46/280 (16%), Positives = 91/280 (32%), Gaps = 22/280 (7%)

Query: 4   VTVATWNVN---S-IRARIHNLAAWIKENNPDIICLQETKTED-KNFPFETLQSLNYHIE 58
           + V TWN+       RAR   + A + +  PD++ LQE   ++ +N      + L  H+ 
Sbjct: 12  LRVMTWNLWWRFGDWRARREAILAVLAQERPDVVGLQEVWADEGENLAQWLGERLGMHVA 71

Query: 59  TCG---QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
                  + +      +   P  +     G+ +  +   ++                   
Sbjct: 72  WSPSPAPQRWRRRLAWNGEDPAVVDGLQFGNAVLSRHPLLDQEVRELPGGGDEDEGRTAL 131

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP--IIWENDA 173
              + + +     +        A   + +E+            +  + Y P      N  
Sbjct: 132 KVLVDAPRRPLPFTTTHLNSSPAESAVRVEQVRALVPFVVGGHRRGEHYPPVLTGDFNAV 191

Query: 174 CFTLEVRQSFQKLQNMGFT-----DAIRATHDTHHLYSFWDYYAD--SWSKNKGIRIDHI 226
             + E+R +   L           D+ R        ++ WD      +       RIDH+
Sbjct: 192 AESDELRLAGGYLTPGPVPGVVLVDSWRFAAPDDPGFT-WDRRNPFVARVHQPSARIDHV 250

Query: 227 MLS-PEAT--SLLHSAR-IDTKPRGWTKPSDHTPVIVSLD 262
           ++  P  T    +   R + T+P G    SDH  V+V L+
Sbjct: 251 LVGLPPFTGEGSVRDVRLVATEPVGGVWASDHAAVVVDLE 290


>gi|3073779|dbj|BAA25763.1| reverse transcriptase [Chlorella vulgaris]
          Length = 1309

 Score = 73.7 bits (179), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/287 (13%), Positives = 79/287 (27%), Gaps = 36/287 (12%)

Query: 4   VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETK--TEDKNFPFETLQSLNYHIET 59
           + + + NVN +R R     L   ++ +  DII LQET   + ++   +         +  
Sbjct: 9   LRLLSLNVNGLRDRDKRRCLFNLLERDRWDIILLQETHHSSTEEGTAWAQEGPAG--VRC 66

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN-- 117
                       S+ + + ++         +  R    T                  +  
Sbjct: 67  NWSGPAFWCHFTSQSRGVAVLLRPTASTAAITVRHCSTTGRTLLVDFTYCGQPYTVASVY 126

Query: 118 --PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
                + +       +   L  A   L   +    AG  ++            W      
Sbjct: 127 APAAAADRQQYYTQELLPSLPAARCLLVGGDFNCIAGQQDMAAGQPGQRTHGYWTGLRLV 186

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
             E              D  R  + +   ++       S +     R+D  ++S    + 
Sbjct: 187 ETE----------HQLYDVWRDLNPSSRAFTHVATTGQSAA-----RLDRWLVSETLRAR 231

Query: 236 LHSARIDTKPRG----WTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278
           +       +PR        P DH  + VSL +  P      S +  +
Sbjct: 232 VS-----REPRAIGQVLGYPGDH--LGVSLSLTAPASTLYGSAAWRL 271


>gi|119493288|ref|XP_001263834.1| DNA lyase, putative [Neosartorya fischeri NRRL 181]
 gi|119411994|gb|EAW21937.1| DNA lyase, putative [Neosartorya fischeri NRRL 181]
          Length = 622

 Score = 73.7 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 25/72 (34%), Gaps = 4/72 (5%)

Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
           F            +Y+ W+    +   N G RID+++ S +       + I     G   
Sbjct: 247 FDICRSFHPGRRGMYTCWEQRIIARPGNYGSRIDYVLCSLDMQDWFSDSNIQEGLMG--- 303

Query: 251 PSDHTPVIVSLD 262
            SDH PV     
Sbjct: 304 -SDHCPVYAVFK 314



 Score = 39.8 bits (91), Expect = 0.46,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 20/61 (32%)

Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80
            +       DI+  QETK + K+   + +    +       K+  G + +  Y      
Sbjct: 20 FESMFDILEADIVVFQETKIQRKDLRDDMVLVPGWDCYFSLPKTKKGYSGVVIYTRNATC 79

Query: 81 T 81
           
Sbjct: 80 C 80


>gi|301121913|ref|XP_002908683.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262099445|gb|EEY57497.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 388

 Score = 73.7 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 48/292 (16%), Positives = 85/292 (29%), Gaps = 34/292 (11%)

Query: 4   VTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQE-TKTEDKNFPFETLQSL 53
           + + T+N+         NS R R  ++A  I   +P I+  QE  K +        L+SL
Sbjct: 111 LKIMTFNLRFAGTGDGLNSWRYRKDHVADIIDRYHPAIMGTQEGLKAQ-----LAELESL 165

Query: 54  NYHIETCGQKSYNGVAILSKYQPI--EIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
             H                +       +     G+    +      T   +   +R+   
Sbjct: 166 LNHPYERFGVEREENGEFEQIFYDAAVLERLDDGNFWLSEEPDTPGTQGWDAACVRMVTW 225

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
               G         +   +  +      +  E    L++A    I               
Sbjct: 226 ----GKFRLRATQQELFVFNTQLDHVGPKSREEGSKLLWARIQQISGDAPFFLMGDFNTY 281

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG----IR----I 223
               T     S +    +       A       Y+   Y+  +  KN G    +R    I
Sbjct: 282 RHTSTYSYFTSQEGGPQLREAWPEAAKQIGDVSYT---YHGWAGVKNDGEKTAVRAANHI 338

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTS 275
           D I   P+    + +  + T+ R    PSDH P+   L  P P +      +
Sbjct: 339 DWIFYRPQM--KVLATEVITEDRKGRYPSDHYPIQAELLFPSPAELPPPGAN 388


>gi|16124778|ref|NP_419342.1| hypothetical protein CC_0523 [Caulobacter crescentus CB15]
 gi|221233494|ref|YP_002515930.1| endonuclease/exonuclease/phosphatase family protein [Caulobacter
           crescentus NA1000]
 gi|13421706|gb|AAK22510.1| conserved hypothetical protein [Caulobacter crescentus CB15]
 gi|220962666|gb|ACL94022.1| endonuclease/exonuclease/phosphatase family protein [Caulobacter
           crescentus NA1000]
          Length = 259

 Score = 73.7 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 44/277 (15%), Positives = 81/277 (29%), Gaps = 45/277 (16%)

Query: 1   MSVVTVATWNVNSIR-------ARIHNLAAWIKENNPDIICLQE-------TKTEDKNFP 46
           M    + T+NV+  R         +  +A  I    PD++ LQE       T++ D+   
Sbjct: 1   MKTFRLMTYNVH--RCVGTDRKLDVERVAEVIAAERPDVVALQELDVGRARTQSVDQAHR 58

Query: 47  FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
              L  +++H                     E      G  L  +   +E    +  +  
Sbjct: 59  LAELLKMSFHFHPAMAVEEELYGDAILTALPERRIKAQGLPLYRRVPGLEPRGALWIEVE 118

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
             G         +     + K                   P +  GD+N  P        
Sbjct: 119 VGGAKVQIINTHLGLVPQEQKRQAAALLGPEWIGEEAWRAPGVLLGDFNATPYSATYRML 178

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226
                DA           +  +  +     AT  +   +               +RIDH+
Sbjct: 179 RTALRDA-----------QAPSPAWLRPATATFPSSFPF---------------MRIDHV 212

Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            ++    +   S+  D + R     SDH P+++ L+I
Sbjct: 213 FVTKGLETRAVSSPYDARAR---IASDHLPLVIDLEI 246


>gi|134079677|emb|CAK97103.1| unnamed protein product [Aspergillus niger]
          Length = 572

 Score = 73.7 bits (179), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 25/69 (36%), Gaps = 4/69 (5%)

Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
                        +Y+ W+   ++   N G RID+++ S +       + I     G   
Sbjct: 244 HDICRSFHPGRKGMYTCWEQRINARPGNYGSRIDYVLCSLDMQEWFCDSNIQEGLMG--- 300

Query: 251 PSDHTPVIV 259
            SDH PV  
Sbjct: 301 -SDHCPVYA 308



 Score = 39.0 bits (89), Expect = 0.84,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 14/42 (33%)

Query: 18 IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
               A       DI+  QETK + K+   + +    +    
Sbjct: 14 KRTFDAMFDILEADIVVFQETKIQRKDLRDDMVLVPGWDCYF 55


>gi|326430263|gb|EGD75833.1| hypothetical protein PTSG_07951 [Salpingoeca sp. ATCC 50818]
          Length = 377

 Score = 73.3 bits (178), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 39/147 (26%), Positives = 59/147 (40%), Gaps = 10/147 (6%)

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI--IWENDACFT 176
           I  T+ D ++    + L    Q LE  +P++  GD N+     D YN         A  T
Sbjct: 230 IGLTRLDYRVEEWNQDLLAYVQALEKTKPVLITGDLNVAHLDEDIYNYDAKHIAKVAGCT 289

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT-- 233
              R+ F +  N GF D  R  H      +++W         +KG+R+D+ + S   T  
Sbjct: 290 PREREGFTQFLNEGFVDTFRHLHGNVKGNFTYWSARTHGREHDKGLRLDYFVCSKRMTES 349

Query: 234 -SLLHSARIDTKPRGWTKPSDHTPVIV 259
              +H +    K  G    SDH PV  
Sbjct: 350 LPKVHDSYQLHKVLG----SDHCPVGA 372



 Score = 40.2 bits (92), Expect = 0.33,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDI-ICL 35
           V + +WNVN +RA + N    ++E   D+ I L
Sbjct: 201 VKILSWNVNGLRAVVRNSLNHLQEL-VDVSIGL 232


>gi|320592520|gb|EFX04950.1| DNA lyase [Grosmannia clavigera kw1407]
          Length = 795

 Score = 73.3 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 26/71 (36%), Gaps = 3/71 (4%)

Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
                        +Y+ WD   +    N G RID ++ SP    LL    I    +    
Sbjct: 269 HDACRELHPQRRGMYTCWDTRKNHRPANFGSRIDFVLCSPRLMQLLV---IQADIQPQLL 325

Query: 251 PSDHTPVIVSL 261
            SDH PV V L
Sbjct: 326 GSDHCPVYVVL 336



 Score = 62.5 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 28/82 (34%), Gaps = 8/82 (9%)

Query: 7  ATWNVNSIRARIH--------NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           TWNVN IR             L A     + DI+C QE KT   +   + +    +   
Sbjct: 12 VTWNVNGIRNPFKYAPWNNDKTLQAMFDRLDADIVCFQEVKTPKPSLTDDLVFIPGWDSF 71

Query: 59 TCGQKSYNGVAILSKYQPIEIV 80
               S  G + +S Y      
Sbjct: 72 YSFPHSQTGYSGVSVYTRDSCC 93


>gi|320584151|gb|EFW98362.1| AP endonuclease [Pichia angusta DL-1]
          Length = 602

 Score = 73.3 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 4/76 (5%)

Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
            +Y+ W  +  +   N G RID I+ S +   L+  A I     G    SDH PV V  +
Sbjct: 309 KMYTVWSTFKSNRPLNVGSRIDLILASSQLAPLVSQADIWPFLHG----SDHCPVHVDFE 364

Query: 263 IPEPRKKQQDSTSQNM 278
           + +     ++  S   
Sbjct: 365 LADLEFSPEEDRSAEY 380



 Score = 52.5 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 24/67 (35%), Gaps = 10/67 (14%)

Query: 2  SVVTVATWNVNSIRARIHNLAAW---------IKENNPDIICLQETKTEDKNFPFETLQS 52
          + + + T+NVN I+  + N   W         +   N D+I  QE K +  +        
Sbjct: 14 TTLRLVTFNVNGIKT-LKNYFPWTLVSNYSQMLNMMNIDVITFQELKVQRPDVDLSIADV 72

Query: 53 LNYHIET 59
            Y    
Sbjct: 73 DGYRSFI 79


>gi|34392586|dbj|BAC82626.1| pol-like protein [Ciona intestinalis]
          Length = 1263

 Score = 73.3 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 46/268 (17%), Positives = 85/268 (31%), Gaps = 26/268 (9%)

Query: 4   VTVATWNVNSI---RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           +++ T+NV  +   R R      ++++   DIICLQET T         L+ +   + + 
Sbjct: 3   LSLITYNVAGLQNPRKRRSIFY-FLRQKKFDIICLQETHTTASCLRQWELEWVGEILASH 61

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           G     GVA+L   +       +  D+                  L I +  L   N   
Sbjct: 62  GSTKSKGVAVLFSKKLSYSKQDVCVDNFGRYII----------MNLEITDQRLTLCNVYG 111

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   +       L    Q     E  I +GD+N +                       
Sbjct: 112 PNQDSPQFYGNLFTLLTKRQAESGIENCIISGDFNCVLNDKLDKTGG--REKHGNRRAKT 169

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
              Q + ++   D  R  H     Y+           +   R+D ++ + E        +
Sbjct: 170 TILQAMNDLELYDVFRIKHPNSKQYT----RMQKRP-HTASRLDFVLATSEILQKTTQIQ 224

Query: 241 IDTKPRGWTKPSDHTPVIVSLDIPEPRK 268
           I       +  SDH  V + L++ +  +
Sbjct: 225 IV-----LSTQSDHCIVKLVLNLDKIPR 247


>gi|169595280|ref|XP_001791064.1| hypothetical protein SNOG_00377 [Phaeosphaeria nodorum SN15]
 gi|111070752|gb|EAT91872.1| hypothetical protein SNOG_00377 [Phaeosphaeria nodorum SN15]
          Length = 635

 Score = 73.3 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 25/69 (36%), Gaps = 4/69 (5%)

Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
           +        D   +Y+ W+   ++   N G RID ++ S         + I     G   
Sbjct: 254 YDLCREFHPDREGMYTHWEQKINARPGNFGSRIDFVLCSIAIKDWFKDSDIQEGLMG--- 310

Query: 251 PSDHTPVIV 259
            SDH PV  
Sbjct: 311 -SDHCPVYA 318



 Score = 64.4 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 31/86 (36%), Gaps = 8/86 (9%)

Query: 3  VVTVATWNVNSIR--------ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
          +V + TWNVN IR        +      A       D++ +QE K + K+   + +    
Sbjct: 1  MVRITTWNVNGIRNPFGYKPWSEKRTFNAMFDILEADVVVMQELKIQRKDLTDDMVLVPG 60

Query: 55 YHIETCGQKSYNGVAILSKYQPIEIV 80
          +       K   G + +  Y    + 
Sbjct: 61 WDCYFSLPKHKKGYSGVGIYTRQSVC 86


>gi|330920551|ref|XP_003299056.1| hypothetical protein PTT_09967 [Pyrenophora teres f. teres 0-1]
 gi|311327471|gb|EFQ92889.1| hypothetical protein PTT_09967 [Pyrenophora teres f. teres 0-1]
          Length = 634

 Score = 73.3 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 25/69 (36%), Gaps = 4/69 (5%)

Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
           +        D   +++ W+   ++   N G RID I+ S         A I     G   
Sbjct: 256 YDLCREFHPDREGMFTHWEQKINARPGNFGSRIDFILCSLAMKDWFKDANIQEGLMG--- 312

Query: 251 PSDHTPVIV 259
            SDH PV  
Sbjct: 313 -SDHCPVYA 320



 Score = 61.7 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 31/86 (36%), Gaps = 8/86 (9%)

Query: 3  VVTVATWNVNSIR--------ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
          +V + TWNVN IR        +      A       DI+ +QE K + K+   + +    
Sbjct: 1  MVRITTWNVNGIRNPFGYKPWSTTRTFNAMFDILEADIVIMQELKIQRKDLTDDMVLVPG 60

Query: 55 YHIETCGQKSYNGVAILSKYQPIEIV 80
          +       K   G + +  Y    + 
Sbjct: 61 WDCYFSLPKHKKGYSGVGIYTRQSVC 86


>gi|146323277|ref|XP_754988.2| DNA lyase Apn2 [Aspergillus fumigatus Af293]
 gi|129558370|gb|EAL92950.2| DNA lyase Apn2 [Aspergillus fumigatus Af293]
 gi|159128003|gb|EDP53118.1| DNA lyase Apn2 [Aspergillus fumigatus A1163]
          Length = 648

 Score = 73.3 bits (178), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 25/72 (34%), Gaps = 4/72 (5%)

Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
           F            +Y+ W+    +   N G RID+++ S +       + I     G   
Sbjct: 273 FDICRSFHPGRRGMYTCWEQRIIARPGNYGARIDYVLCSLDMQDWFSDSNIQEGLMG--- 329

Query: 251 PSDHTPVIVSLD 262
            SDH PV     
Sbjct: 330 -SDHCPVYAVFK 340



 Score = 54.0 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/103 (17%), Positives = 31/103 (30%), Gaps = 26/103 (25%)

Query: 5   TVATWNVNSIR---------------ARIHNLAAWIKE-----------NNPDIICLQET 38
            + TWNVN IR                 +  +   + E              DI+  QET
Sbjct: 4   RITTWNVNGIRNPFSYEPWRGNRTFEVDLPKVLHSLNERLIIEQSMFDILEADIVVFQET 63

Query: 39  KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81
           K + K+   + +    +       K+  G + +  Y       
Sbjct: 64  KIQRKDLRDDMVLVPGWDCYFSLPKTKKGYSGVVIYTRNATCC 106


>gi|308505902|ref|XP_003115134.1| CRE-EXO-3 protein [Caenorhabditis remanei]
 gi|308259316|gb|EFP03269.1| CRE-EXO-3 protein [Caenorhabditis remanei]
          Length = 334

 Score = 72.9 bits (177), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 34/99 (34%), Positives = 49/99 (49%), Gaps = 1/99 (1%)

Query: 142 LELEEPLIFAGDYNIIPQPHDCYNPIIWEND-ACFTLEVRQSFQKLQNMGFTDAIRATHD 200
           +  ++P+I+ GD N+     D  NP    N  A FT + R  F  + NMGFTD  R  H 
Sbjct: 120 MNEKKPVIYGGDLNVAHNEIDLKNPESNRNKTAGFTDQERGWFTDMLNMGFTDTFRQMHP 179

Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
               YSFW Y A+S  K+ G R+D+ ++S      +   
Sbjct: 180 ESKKYSFWSYLANSREKDVGWRLDYYVVSNRIMKNVRKC 218


>gi|325119989|emb|CBZ55542.1| hypothetical protein NCLIV_059670 [Neospora caninum Liverpool]
          Length = 455

 Score = 72.9 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 51/303 (16%), Positives = 93/303 (30%), Gaps = 67/303 (22%)

Query: 4   VTVATWNVNSIRARIHN------LAAWIKENNPDIICLQETKTED---------KNFPFE 48
           +++ TWNVNSI +RI +       ++++++ NPDI+CLQE K               P +
Sbjct: 99  LSIVTWNVNSIASRIRDTRQWFYFSSFLQKVNPDILCLQEVKLAAHGPPGAKRGDGMPRD 158

Query: 49  ---TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT 105
                +S         +       +L  ++ +  +         +  R       I    
Sbjct: 159 RSRIKESDKVSSVEAREIREALNTLLPDHKLLISLADWRYSGQMMFIRNDLPEGRIILAE 218

Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH---- 161
                +   +      T    +   +    R      +L++PL++ GD N  P+      
Sbjct: 219 FSPFCVLTTYSPNNGGTPKSFERRRLWD-ERMLEFVTQLKKPLVWVGDLNCAPEDIDLSD 277

Query: 162 ------------DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWD 209
                       D          A  T   R+ F+ +   G+   +              
Sbjct: 278 PEQFRSVIHESADGTIDPDNIGQAGCTDAERRRFRAILERGWDQCMCLKDCFGGS----- 332

Query: 210 YYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV------SLDI 263
                  +  G+R+DHI                         SDH PV+V      +L +
Sbjct: 333 -GPRGMLRGLGMRLDHI--------------------ANFFGSDHCPVLVRFKEKETLAL 371

Query: 264 PEP 266
           P  
Sbjct: 372 PAV 374


>gi|326481851|gb|EGE05861.1| DNA lyase [Trichophyton equinum CBS 127.97]
          Length = 592

 Score = 72.9 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 27/68 (39%), Gaps = 4/68 (5%)

Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253
                     +Y+ W+   ++   N G RID+I+ S    S    + I     G    SD
Sbjct: 248 CREFHPGRTGMYTCWNQKVNARPGNYGSRIDYILCSDNIRSWFVESNIQEGLIG----SD 303

Query: 254 HTPVIVSL 261
           H PV  S+
Sbjct: 304 HCPVYASI 311


>gi|326471548|gb|EGD95557.1| DNA lyase [Trichophyton tonsurans CBS 112818]
          Length = 592

 Score = 72.9 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 27/68 (39%), Gaps = 4/68 (5%)

Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253
                     +Y+ W+   ++   N G RID+I+ S    S    + I     G    SD
Sbjct: 248 CREFHPGRTGMYTCWNQKVNARPGNYGSRIDYILCSDNIRSWFVESNIQEGLIG----SD 303

Query: 254 HTPVIVSL 261
           H PV  S+
Sbjct: 304 HCPVYASI 311


>gi|34392583|dbj|BAC82624.1| pol-like protein [Ciona intestinalis]
          Length = 1239

 Score = 72.9 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 50/276 (18%), Positives = 89/276 (32%), Gaps = 38/276 (13%)

Query: 3   VVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
            V  AT+NV  +R       +  +++     I+ LQET    +    + L  + +  E  
Sbjct: 19  TVNFATFNVAGLRNDKKRKTIFRYLQNKRYWILFLQETHCSREK---QKLWEMEWQGEIL 75

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
                N    ++      +   +     D   R++ AT  IN   L I N+Y P      
Sbjct: 76  WANGTNNSRGVAILFNKRLSYEVLNHAADPIGRWLMATIKINGTILTITNIYGP------ 129

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
               +         L       +     I  GD+N+   P    N     N         
Sbjct: 130 ----NRDEPQFFEDLFQKLLITQYTGATIIGGDFNVTINPALDRNIPTLRNKNSHR---- 181

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN--KGIRIDHIMLSPEATSLLHS 238
                +     +D +R  +    +++           N     RID+ ++S    S L +
Sbjct: 182 VLTTNMTAHNLSDPLRFNNPGLKVFT-------RIQNNPYAASRIDYFLVSKLVLSKLRA 234

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI---PEPRKKQQ 271
           A I    +     SDH   + + ++   P PR +  
Sbjct: 235 ASIVPGVK-----SDHC--VATFEVMLDPNPRGRGT 263


>gi|289672873|ref|ZP_06493763.1| exodeoxyribonuclease III Xth [Pseudomonas syringae pv. syringae
           FF5]
          Length = 179

 Score = 72.9 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 34/151 (22%), Positives = 56/151 (37%), Gaps = 5/151 (3%)

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
                      + K   +  F ++  ++       I+ G   +  Q  D  N    +   
Sbjct: 29  FPSGMNGDEDLNQKFKLMDDFGKYMDKQRRKRREYIYCGSLYVAQQKLDIKNWRDSQQSP 88

Query: 174 CF-TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
            F   E     + +  MG+ DA+R        YS+W     +   N G R D+ +L+P  
Sbjct: 89  GFLAPERAWMDEIVGTMGYVDALREVSREGDQYSWWPDNEQAEMLNLGWRFDYQILTPGL 148

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              + SAR+  +PR     S H P+IV  D 
Sbjct: 149 RRFVRSARLPRQPR----FSQHAPLIVDYDW 175


>gi|330901157|gb|EGH32576.1| exonuclease III [Pseudomonas syringae pv. japonica str. M301072PT]
          Length = 53

 Score = 72.9 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 17/46 (36%), Positives = 23/46 (50%)

Query: 216 SKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
              +G+RID IM S      +  A +D   R   KPSDH P+ + L
Sbjct: 7   EPKRGLRIDLIMTSTGLQPRIKEAGVDYDLRAMEKPSDHAPIWLEL 52


>gi|270015824|gb|EFA12272.1| hypothetical protein TcasGA2_TC004177 [Tribolium castaneum]
          Length = 288

 Score = 72.9 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 3/108 (2%)

Query: 6   VATWNVNSIRARIH-NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETCGQ 62
           + TWNV+ +R+ +       +K + PDI+C+QET       P E      Y     +  +
Sbjct: 129 ITTWNVDGLRSWLKKGCLDILKYDKPDILCIQETMCAVYKLPEEVKTIEGYETLWCSSDK 188

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
             Y GV I+ K +P+ ++  +   + D + R I   +      + + N
Sbjct: 189 DGYAGVGIMVKDKPLNVIYGIDSKEHDTEGRCITVEYETFVVNVYVPN 236


>gi|170665738|gb|ACB29408.1| endonuclease [Arabidopsis thaliana]
          Length = 408

 Score = 72.9 bits (177), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 37/114 (32%), Gaps = 30/114 (26%)

Query: 198 THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE-------------ATSLLHSARIDTK 244
             +    ++ W   + +   N G RIDHI+++                   +    I T+
Sbjct: 38  HPERKDAFTCWSSSSGAEQFNYGSRIDHILVAGSCLHQDEDKQGHSFLACHVKECDILTE 97

Query: 245 ---------PRGWT-------KPSDHTPVIVSL-DIPEPRKKQQDSTSQNMKPI 281
                    P  W        K SDH PV +S  D+P+  +           P+
Sbjct: 98  YKRXXNENMPTRWKGGLVTKLKGSDHVPVFISFDDLPDIPEHSTXPLXSRYLPM 151


>gi|305666478|ref|YP_003862765.1| hypothetical protein FB2170_09421 [Maribacter sp. HTCC2170]
 gi|88708745|gb|EAR00980.1| hypothetical protein FB2170_09421 [Maribacter sp. HTCC2170]
          Length = 297

 Score = 72.5 bits (176), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 40/269 (14%), Positives = 81/269 (30%), Gaps = 19/269 (7%)

Query: 5   TVATWNV-NSI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
            + ++N+ N         R   L +W+    PD++ LQE    + +   +  ++  +   
Sbjct: 25  KLISYNIWNGFEWGKDTVRQEKLLSWMDSKKPDVVALQELCDYNDDKLTQDAKAWGHDYS 84

Query: 59  TCGQKSYNGVAILSKYQPI----EIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
              + +   V + SKY  +     I     G        F      ++       +    
Sbjct: 85  VLLKTTGYSVGLTSKYPIVLKEKIIEGMHHGALHCSTNGFEIFVVHLSPSQWEKRSEEAE 144

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
             + I   +       +      A    + +     A       +  +  +      +  
Sbjct: 145 ILSGIIDLEIKAGNKVLVCGDFNALSPADADWYNSRADLLQDARKRDEKNDQSENLREGN 204

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN------KGIRIDHIML 228
           F   V   F  +    F +A +     +   SF          +      +G RID+I+ 
Sbjct: 205 FDYSVMSKFYGV--GLFDNASKFVGTGNDRISFPTQVFRKTETDKKKLIDRGTRIDYILT 262

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPV 257
           S    +     +I   P  +   SDH PV
Sbjct: 263 SYNLVNQCIDTKIYNGPEAY-FLSDHYPV 290


>gi|312129153|ref|YP_003996493.1| endonuclease/exonuclease/phosphatase [Leadbetterella byssophila DSM
           17132]
 gi|311905699|gb|ADQ16140.1| Endonuclease/exonuclease/phosphatase [Leadbetterella byssophila DSM
           17132]
          Length = 293

 Score = 72.1 bits (175), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 39/275 (14%), Positives = 71/275 (25%), Gaps = 25/275 (9%)

Query: 5   TVATWNVN-----------SIRARIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQS 52
            + T N+               +R       I +  PDIICLQE  K +  +F  +    
Sbjct: 28  RIMTCNIRVALDEDEEKGVGWSSRKKICLDIISKYKPDIICLQEVLKGQAADF-KKHFS- 85

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
             Y +        +            I  +               T+ ++   L  G+  
Sbjct: 86  -GYQLLGFDGPEMDAN----PVGYHGIAKNPILYSTKKYELISAGTYWLSETPLVAGSKS 140

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY---NPIIW 169
                   +     K     +  R  +  L+            ++ +    Y    P I 
Sbjct: 141 WDTARARHANWIRLKDKSTGKEFRVINLHLDHVSNDAKFHQLKMVIEEAGQYLPAFPQIL 200

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN-KGIRIDHIML 228
             D     + +                   +    ++   +    + K   G RID I  
Sbjct: 201 CGDFNSRFQSKVFSTPRNAGWKEGMEILYGEKEMGFTGHAFKGLQYEKGPSGGRIDFIWY 260

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             +    +  A I         PSDH  V+    +
Sbjct: 261 KGDIE--VKRAEILRDEVKGVYPSDHFFVLNDFQL 293


>gi|295687845|ref|YP_003591538.1| endonuclease/exonuclease/phosphatase [Caulobacter segnis ATCC
           21756]
 gi|295429748|gb|ADG08920.1| Endonuclease/exonuclease/phosphatase [Caulobacter segnis ATCC
           21756]
          Length = 259

 Score = 72.1 bits (175), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 43/275 (15%), Positives = 80/275 (29%), Gaps = 41/275 (14%)

Query: 1   MSVVTVATWNVN---SI--RARIHNLAAWIKENNPDIICLQE-------TKTEDKNFPFE 48
           M  + + T+NV+       +  +  +A  I    PD++ LQE       T+  D+     
Sbjct: 1   MKTLRLMTYNVHRCVGADRKLDVERVAEVIAAERPDVVALQELDVRRARTRGVDQAHRLA 60

Query: 49  TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108
            L  +++H                     E      G  L  +   +E    +  +    
Sbjct: 61  ELLKMSFHFHPAMAVEEELYGDAILTALPERRIKAKGLPLYRRVPGLEPRGALWIEVEVG 120

Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168
           G         +     + K                   P +  GD+N  P          
Sbjct: 121 GTKVQIINTHLGLVPQEQKRQAAALLGPDWMGDDRWVAPGVVLGDFNATPYSATYRMLRT 180

Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
              DA           +  +  +     AT  +   +               +RIDH+ L
Sbjct: 181 ALRDA-----------QAPSPAWPRPATATFPSSFPF---------------MRIDHVFL 214

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +    +    +  D + R     SDH P++V L++
Sbjct: 215 TKGLETRGVRSPYDARAR---IASDHLPLVVDLEV 246


>gi|258573517|ref|XP_002540940.1| hypothetical protein UREG_00453 [Uncinocarpus reesii 1704]
 gi|237901206|gb|EEP75607.1| hypothetical protein UREG_00453 [Uncinocarpus reesii 1704]
          Length = 499

 Score = 72.1 bits (175), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 31/83 (37%), Gaps = 5/83 (6%)

Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253
                 +   +Y+ W+   ++   N G RID+++ S +       + I     G    SD
Sbjct: 172 CRNFHPNRQGMYTCWEQRINARPGNYGARIDYVLCSMDMEDWFVWSDIQEGLMG----SD 227

Query: 254 HTPVIVSLDIPEPRKKQQDSTSQ 276
           H PV   +     R +  D +  
Sbjct: 228 HCPVYALIK-DTVRYRDADRSIW 249


>gi|212544628|ref|XP_002152468.1| DNA lyase Apn2 [Penicillium marneffei ATCC 18224]
 gi|210065437|gb|EEA19531.1| DNA lyase Apn2 [Penicillium marneffei ATCC 18224]
          Length = 607

 Score = 72.1 bits (175), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 25/72 (34%), Gaps = 4/72 (5%)

Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
                    D   +Y+ W+   ++   N G RID+I+ S +         I     G   
Sbjct: 244 HDICRSFHPDRRGMYTCWETRVNARPGNYGARIDYILSSLDIKDWWSEGNIQEGLMG--- 300

Query: 251 PSDHTPVIVSLD 262
            SDH PV     
Sbjct: 301 -SDHCPVYAVFK 311



 Score = 38.6 bits (88), Expect = 0.88,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 21/60 (35%)

Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80
            +       DI+  QETK + K+   + +    +       +   G + +  Y   E+ 
Sbjct: 17 FNSMFNILEADIVIFQETKIQRKDLRDDMVLVPGWDCYFSLPRHKKGYSGVVIYTRNEVC 76


>gi|92111133|gb|ABE73458.1| endonuclease/reverse transcriptase [Pan troglodytes]
          Length = 1275

 Score = 72.1 bits (175), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 57/261 (21%), Positives = 95/261 (36%), Gaps = 32/261 (12%)

Query: 2   SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           S +T+ T NV+ + + I    LA+WIK  +P + C+QET    ++     ++      + 
Sbjct: 6   SHITILTLNVSGLNSPIKRHRLASWIKSQDPSVCCIQETHLTCRDTHRLKIKGWRKIHQA 65

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            G++   GVAIL   +     T       D +  +I    +I  + L I N+Y P+    
Sbjct: 66  NGKQKKAGVAILVSDKTDFKPT---NIKRDKEGHYIMVKGSIQQEELTILNIYAPNTGAP 122

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              K              +  + +L+   +  GD+N      D         D       
Sbjct: 123 RFIKQ-----------VLSDLQRDLDSHTLIMGDFNTPLSTLDRSTRQKVNKDT------ 165

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           ++    L      D  R  H     Y+F+     ++SK     IDHI+ S    S     
Sbjct: 166 QELNSALHQEDLIDIYRTLHPKSTEYTFFSAPHHTYSK-----IDHIVGSKALLSKCKRT 220

Query: 240 RIDTKPRGWTKPSDHTPVIVS 260
            I          SDHT + + 
Sbjct: 221 EILIN-----YHSDHTAIKLE 236


>gi|62085792|gb|AAX63287.1| DNA lyase [Cordyceps brongniartii]
          Length = 579

 Score = 72.1 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 5/70 (7%)

Query: 192 TDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
            D  R  H T   +++ WD   ++   N G  ID+I+ S    S    + I     G   
Sbjct: 228 WDICRCFHPTRLGMHTCWDTKRNTRPANVGSPIDYILCSDGLKSWFVDSNIQEGLMG--- 284

Query: 251 PSDHTPVIVS 260
            SDH PV  +
Sbjct: 285 -SDHCPVYAT 293



 Score = 40.9 bits (94), Expect = 0.22,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 22/60 (36%)

Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80
            A       DI+ +QETK + K+   + +    + +     +   G + ++ Y      
Sbjct: 2  FQAMFDILEADIVIMQETKIQRKDLQDDMVLVPGWDVYFSLPQHKKGYSGVAIYTRNATC 61


>gi|147790936|emb|CAN77234.1| hypothetical protein VITISV_010061 [Vitis vinifera]
          Length = 3216

 Score = 72.1 bits (175), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 44/264 (16%), Positives = 85/264 (32%), Gaps = 34/264 (12%)

Query: 2   SVVTV--ATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-H 56
           S++ +   +WN+  +  R     + A I+    D++CL ETK +D       + SL    
Sbjct: 553 SLMKIKIISWNIRGVNDRDKRKVIKALIRSQKADLVCLXETKIQD--ISRXIIHSLGVGR 610

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
               G  S  G A          V  L G ++ + +         +        +Y P  
Sbjct: 611 FLGWGAMSARGAAGRVVVFWDXRVLELMGMEVGLFSVSCRFKNCXDGFLWTFTGVYGPT- 669

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
                     K      +    + R    +P    GD+N++  P +              
Sbjct: 670 ---------MKRHREXFWEELGAIRGLWSDPWCIGGDFNVVRFPSERSREGRLTGSMRRF 720

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
            EV               ++       L+++    +   +     R+D  ++S +  +  
Sbjct: 721 SEVI----------EELXLKDLPLHGGLFTW----SGGLNGLSRSRLDRFLISEDWENHF 766

Query: 237 HSARIDTKPRGWTKPSDHTPVIVS 260
             A   + PR     SDH P+++ 
Sbjct: 767 SGAXQCSLPR---PVSDHFPILLD 787


>gi|255728113|ref|XP_002548982.1| hypothetical protein CTRG_03279 [Candida tropicalis MYA-3404]
 gi|240133298|gb|EER32854.1| hypothetical protein CTRG_03279 [Candida tropicalis MYA-3404]
          Length = 481

 Score = 71.7 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 36/111 (32%), Gaps = 5/111 (4%)

Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI 221
           + Y       D     +      + +   +            +Y+ W+   +S   N G 
Sbjct: 278 NKYVYRSMWQDLSIDGKEENKDDEQKQFLYDTTRFIQGRRMKMYTVWNTLTNSREINYGS 337

Query: 222 RIDHIMLS-PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271
           RID I+ S       +  A I     G    SDH PV    DI E ++   
Sbjct: 338 RIDLILFSDESMVKNISQADIWPCILG----SDHCPVFTDYDIDECQEDDD 384



 Score = 44.8 bits (104), Expect = 0.015,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 20/53 (37%), Gaps = 9/53 (16%)

Query: 2  SVVTVATWNVNSIRARIH-----NLA----AWIKENNPDIICLQETKTEDKNF 45
          S +   T+NVN I+   +            A     + DII LQE K  +   
Sbjct: 22 STIRYVTFNVNGIKTIFNYHPWNKFKQDYNALFNSLHADIITLQELKLSESTI 74


>gi|291240985|ref|XP_002740396.1| PREDICTED: Transposon TX1 uncharacterized 149 kDa protein-like
           [Saccoglossus kowalevskii]
          Length = 1297

 Score = 71.7 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 46/267 (17%), Positives = 86/267 (32%), Gaps = 35/267 (13%)

Query: 1   MSVVTVATWNVNSIRARIHN--LAAWIK-ENNPDIICLQETKTEDKNFPFETLQSLNYHI 57
           M  ++VATWNVN  R  +    +  ++K   N D+  LQET +   +          + I
Sbjct: 1   MLNISVATWNVNGCRDSLKRHSVFNYLKLNQNADLCFLQETHSLHAD-------EARWQI 53

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
                 +++     S    I +         +       +   +N + L +         
Sbjct: 54  VWRAPIAFSHGTTTSAGVAILV-------SPNKNITINSSRSIVNGRLLHVNATVNGSRY 106

Query: 118 PITSTKYDDKISWIKRFLRFAS---QRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
            + +            F          L+  + +I  GD+N    P              
Sbjct: 107 HLLNVYAPTNGVERSAFFNTLKKTINELDKNDCIIVGGDFNCTLNPSLDR----NRTFEP 162

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
                +     +    F DA R  H     +++     DS+S     R+D   ++    S
Sbjct: 163 NAPSTQVLQNIVNRFKFIDAWRRFHGNTRAFTW--SRGDSYS-----RLDRFYITNTLAS 215

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261
            + S  ID+     +  SDH P+ + +
Sbjct: 216 KIISVLIDSA----STLSDHKPIKLVI 238


>gi|237717228|ref|ZP_04547709.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|237718983|ref|ZP_04549464.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|262405995|ref|ZP_06082545.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|294647971|ref|ZP_06725522.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           ovatus SD CC 2a]
 gi|294806915|ref|ZP_06765740.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           xylanisolvens SD CC 1b]
 gi|298480085|ref|ZP_06998284.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. D22]
 gi|229443211|gb|EEO49002.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|229451761|gb|EEO57552.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|262356870|gb|EEZ05960.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|292636687|gb|EFF55154.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           ovatus SD CC 2a]
 gi|294445944|gb|EFG14586.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           xylanisolvens SD CC 1b]
 gi|298273894|gb|EFI15456.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. D22]
          Length = 361

 Score = 71.7 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/267 (14%), Positives = 78/267 (29%), Gaps = 22/267 (8%)

Query: 4   VTVATWNVNSIRARIHN-----LAAWIKENNPDIICLQET------KTEDKNFPFETLQS 52
           + + ++NV S            + +++ ++N DIICLQE       K   +    + L++
Sbjct: 101 IKILSYNVMSFNNLEKKDGKNPVLSYLVDSNADIICLQEYNTATNKKYLTEQDIKKALKA 160

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
             Y       K    +A  SK+  + I       + +   +++          +   +L 
Sbjct: 161 YPYQSVHQQGKGDVQLACFSKFPILSIHPIKYESNYNGSMKYVLNVNNDTLTLIN-NHLE 219

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                      Y+D I            R  + +    +                     
Sbjct: 220 SNKLTKEDRGMYEDMIKDPNAKKVKTGLRQLIRKLAEASAIRASQADSVAKAIAACKYPT 279

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                +         +   T  +              Y  + +      RID+I++SP  
Sbjct: 280 TIVCGDFNDGSISYTHRILTQKLDDAFTQSGKGLGISYNQNKFY----FRIDNILISPNL 335

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIV 259
            +   +  +D       K SDH P+  
Sbjct: 336 KAY--NCTVDRSI----KASDHYPIWC 356


>gi|329956608|ref|ZP_08297181.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           clarus YIT 12056]
 gi|328523980|gb|EGF51056.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           clarus YIT 12056]
          Length = 374

 Score = 71.7 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 41/271 (15%), Positives = 79/271 (29%), Gaps = 27/271 (9%)

Query: 4   VTVATWNVNSIRARIHN-----LAAWIKENNPDIICLQET-------KTEDKNFPFETLQ 51
           +   ++N+      +       +  ++KE+N DI+CLQE        +   K+   E L+
Sbjct: 110 IKFLSYNIMGFNGAVKKDGKNPILTYLKESNADILCLQEYASDESPRRLTQKDIERE-LK 168

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
              YH  +           ++ Y    I++    +        +     +N  T+ + N 
Sbjct: 169 DYPYHRISVVGSGSGYTNKIACYSKFPILSARVLNYPSGYNGSVLYELKLNEDTITLINN 228

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
           +L       + K   +                L    +        PQ       I    
Sbjct: 229 HLESNKLTKADKDIYEDILKAPEKEKVKSGARLLVHKLAEASAIRAPQADTIAREIA--- 285

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG---IRIDHIML 228
            +     V                    +    ++         S N+     RID+I++
Sbjct: 286 -SSRYPSVIVCGDFNDTPISYAHRVIAQNLDDAFTQ-SGRGLGISYNQNKFYFRIDNILI 343

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
           S    S   +  +D       K SDH P+  
Sbjct: 344 SKNLQSY--NCTVDRSI----KESDHYPIWC 368


>gi|141447778|gb|ABO87600.1| DNA lyase [Coccidioides immitis]
          Length = 606

 Score = 71.7 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 4/65 (6%)

Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253
             +   D   +Y+ W+   ++   N G RID+++ S +       + I     G    SD
Sbjct: 256 CRKFHPDRLGMYTCWEQRVNARPGNYGARIDYVLCSVDMEDWFTESNIQEGLMG----SD 311

Query: 254 HTPVI 258
           H PV 
Sbjct: 312 HCPVY 316



 Score = 56.3 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 11/82 (13%)

Query: 4  VTVATWNVNSIR--------ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55
          + + TWNVN IR        A   +          DII  QETK + ++   + +    +
Sbjct: 3  LRLTTWNVNGIRNPFSYPPRAENKSFERMFDILEGDIIVFQETKIQKRDLRDDMVLIPGW 62

Query: 56 HIET---CGQKSYNGVAILSKY 74
                   +K Y+GV I ++ 
Sbjct: 63 DCFFSLPRHKKGYSGVVIYTRC 84


>gi|293368711|ref|ZP_06615316.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           ovatus SD CMC 3f]
 gi|292636176|gb|EFF54663.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           ovatus SD CMC 3f]
          Length = 361

 Score = 71.7 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/267 (14%), Positives = 78/267 (29%), Gaps = 22/267 (8%)

Query: 4   VTVATWNVNSIRARIHN-----LAAWIKENNPDIICLQET------KTEDKNFPFETLQS 52
           + + ++NV S            + +++ ++N DIICLQE       K   +    + L++
Sbjct: 101 IKILSYNVMSFNNLEKKDGKNPVLSYLVDSNADIICLQEYNTATNKKYLTEQDIKKALKA 160

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
             Y       K    +A  SK+  + I       + +   +++          +   +L 
Sbjct: 161 YPYQSVHQQGKGDVQLACFSKFPILSIHPIEYESNYNGSMKYVLNVNNDTLTLIN-NHLE 219

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                      Y+D I            R  + +    +                     
Sbjct: 220 SNKLTKEDRGMYEDMIKDPNAKKVKTGLRQLIRKLAEASAIRASQADSVAKAIAACKYPT 279

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                +         +   T  +              Y  + +      RID+I++SP  
Sbjct: 280 TIVCGDFNDGSISYTHRILTQKLDDAFTQSGKGLGISYNQNKFY----FRIDNILISPNL 335

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIV 259
            +   +  +D       K SDH P+  
Sbjct: 336 KAY--NCTVDRSI----KASDHYPIWC 356


>gi|123223481|emb|CAM21423.1| apurinic/apyrimidinic endonuclease 2 [Mus musculus]
          Length = 246

 Score = 71.7 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 14/66 (21%)

Query: 3  VVTVATWNVNSIRARIHNLA------------AWIKENNPDIICLQETKTEDKNF--PFE 48
          ++ V +WN+N IR+ +  LA              + E + DI+CLQETK        P  
Sbjct: 1  MLRVVSWNINGIRSPLQGLACQEPSSCPTALRRVLDELDADIVCLQETKVTRDVLTEPLA 60

Query: 49 TLQSLN 54
           ++  N
Sbjct: 61 IVEGYN 66


>gi|26348875|dbj|BAC38077.1| unnamed protein product [Mus musculus]
          Length = 260

 Score = 71.7 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 14/66 (21%)

Query: 3  VVTVATWNVNSIRARIHNLA------------AWIKENNPDIICLQETKTEDKNF--PFE 48
          ++ V +WN+N IR+ +  LA              + E + DI+CLQETK        P  
Sbjct: 1  MLRVVSWNINGIRSPLQGLACQEPSSCPTALRRVLDELDADIVCLQETKVTRDVLTEPLA 60

Query: 49 TLQSLN 54
           ++  N
Sbjct: 61 IVEGYN 66


>gi|20071198|gb|AAH26769.1| Apex2 protein [Mus musculus]
          Length = 246

 Score = 71.7 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 14/66 (21%)

Query: 3  VVTVATWNVNSIRARIHNLA------------AWIKENNPDIICLQETKTEDKNF--PFE 48
          ++ V +WN+N IR+ +  LA              + E + DI+CLQETK        P  
Sbjct: 1  MLRVVSWNINGIRSPLQGLACQEPSSCPTALRRVLDELDADIVCLQETKVTRDVLTEPLA 60

Query: 49 TLQSLN 54
           ++  N
Sbjct: 61 IVEGYN 66


>gi|26349295|dbj|BAC38287.1| unnamed protein product [Mus musculus]
 gi|123223483|emb|CAM21425.1| apurinic/apyrimidinic endonuclease 2 [Mus musculus]
 gi|123230064|emb|CAM15344.1| apurinic/apyrimidinic endonuclease 2 [Mus musculus]
          Length = 260

 Score = 71.7 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 14/66 (21%)

Query: 3  VVTVATWNVNSIRARIHNLA------------AWIKENNPDIICLQETKTEDKNF--PFE 48
          ++ V +WN+N IR+ +  LA              + E + DI+CLQETK        P  
Sbjct: 1  MLRVVSWNINGIRSPLQGLACQEPSSCPTALRRVLDELDADIVCLQETKVTRDVLTEPLA 60

Query: 49 TLQSLN 54
           ++  N
Sbjct: 61 IVEGYN 66


>gi|26333609|dbj|BAC30522.1| unnamed protein product [Mus musculus]
 gi|123223482|emb|CAM21424.1| apurinic/apyrimidinic endonuclease 2 [Mus musculus]
 gi|123230063|emb|CAM15343.1| apurinic/apyrimidinic endonuclease 2 [Mus musculus]
          Length = 266

 Score = 71.7 bits (174), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 14/66 (21%)

Query: 3  VVTVATWNVNSIRARIHNLA------------AWIKENNPDIICLQETKTEDKNF--PFE 48
          ++ V +WN+N IR+ +  LA              + E + DI+CLQETK        P  
Sbjct: 1  MLRVVSWNINGIRSPLQGLACQEPSSCPTALRRVLDELDADIVCLQETKVTRDVLTEPLA 60

Query: 49 TLQSLN 54
           ++  N
Sbjct: 61 IVEGYN 66


>gi|72161438|ref|YP_289095.1| hypothetical protein Tfu_1034 [Thermobifida fusca YX]
 gi|71915170|gb|AAZ55072.1| conserved hypothetical protein [Thermobifida fusca YX]
          Length = 232

 Score = 71.4 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 41/271 (15%), Positives = 67/271 (24%), Gaps = 52/271 (19%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           +V+ V ++N+ S+R     +A  I+   PD++CLQE                        
Sbjct: 3   AVLRVLSYNIRSLRDDPLAVARVIRSCRPDVVCLQE------------------------ 38

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
                        + +   T           R          + L    L + H +    
Sbjct: 39  -----------APRHLLWQTKRRWLARRCGLRLAVGRRPGGLEILTAPTLAVDHCSHRLL 87

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND------ACF 175
            +Y                R  +   +            H                 A  
Sbjct: 88  HRYPRLHQRALAIALIRRGRRRIAVAVSHLDLQARARYAHAAQLLAFLGMQPAPAVLAVD 147

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
             E                  A        +F  +   S       RID I +    T  
Sbjct: 148 VNERPDGPAWQMLATHLVDAGAHGPEGGEPTFPSWRPRS-------RIDTIFVDRRLT-- 198

Query: 236 LHSARIDTKP--RGWTKPSDHTPVIVSLDIP 264
           + +A I   P  R     SDH PV+  + +P
Sbjct: 199 VRAAGIPAAPARRDLVAASDHLPVLAEIALP 229


>gi|190347850|gb|EDK40199.2| hypothetical protein PGUG_04297 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 543

 Score = 71.4 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 5/70 (7%)

Query: 203 HLYSFWDYYADSWSKNKGIRIDHIML-SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
            +Y+ W+    +   N G RID I+  S      + SA I     G    SDH PV    
Sbjct: 317 GMYTVWNTLTGARQSNFGSRIDLILTSSKALCKNVSSANIWPFLHG----SDHCPVYTDF 372

Query: 262 DIPEPRKKQQ 271
           ++ +  K+  
Sbjct: 373 EVQDVEKEPP 382



 Score = 45.2 bits (105), Expect = 0.011,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 20/53 (37%), Gaps = 9/53 (16%)

Query: 2  SVVTVATWNVNSIRARI--------HNLAAW-IKENNPDIICLQETKTEDKNF 45
            + + T+NVN ++                  ++    DI+ LQE K   +N 
Sbjct: 19 RTLRLVTFNVNGVKTIFNYHPWNGHKQCFDTSLQYLKADIVSLQELKLTAQNL 71


>gi|146415196|ref|XP_001483568.1| hypothetical protein PGUG_04297 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 543

 Score = 71.4 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 5/70 (7%)

Query: 203 HLYSFWDYYADSWSKNKGIRIDHIML-SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
            +Y+ W+    +   N G RID I+  S      + SA I     G    SDH PV    
Sbjct: 317 GMYTVWNTLTGARQSNFGSRIDLILTSSKALCKNVSSANIWPFLHG----SDHCPVYTDF 372

Query: 262 DIPEPRKKQQ 271
           ++ +  K+  
Sbjct: 373 EVQDVEKEPP 382



 Score = 47.1 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 20/53 (37%), Gaps = 9/53 (16%)

Query: 2  SVVTVATWNVNSIRA---------RIHNLAAWIKENNPDIICLQETKTEDKNF 45
            + + T+NVN ++                  ++    DI+ LQE K   +N 
Sbjct: 19 RTLRLVTFNVNGVKTIFNYHPWNGHKQCFDTLLQYLKADIVSLQELKLTAQNL 71


>gi|147772257|emb|CAN60637.1| hypothetical protein VITISV_022223 [Vitis vinifera]
          Length = 1887

 Score = 71.4 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/255 (14%), Positives = 79/255 (30%), Gaps = 34/255 (13%)

Query: 9    WNVNSI-RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNG 67
            WNV    R +   +   IK    D++CLQETK ++       ++SL              
Sbjct: 903  WNVRGAYREKRKLIKDVIKTQKADLVCLQETKLQE--MTSAIVRSLG------------- 947

Query: 68   VAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDK 127
            V    ++  +       G               +   ++      +  G           
Sbjct: 948  VGRCLEWGALNSRGAAXGGGFWDNRVLQLEEMEVGNYSVSCRFKNVEDGFC-------WA 1000

Query: 128  ISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQ 187
             S +        +   L E     G +N        +N I + +       +  S ++  
Sbjct: 1001 FSGVYGPSVKVEKEEFLSELGAIKGLWNEPWCVAGDFNMIRFPSXRSRGGRLSPSMRRFT 1060

Query: 188  NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA--RIDTKP 245
             +     +R       ++++    +  ++     RID  ++S +  +        +  +P
Sbjct: 1061 EVIXELELRDLPLQGGMFTW----SGGFNNLLKSRIDRFLISEDWEAHFRECIQGVLARP 1116

Query: 246  RGWTKPSDHTPVIVS 260
                  SDH+P+I+ 
Sbjct: 1117 -----VSDHSPIILD 1126


>gi|297827811|ref|XP_002881788.1| hypothetical protein ARALYDRAFT_483247 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297327627|gb|EFH58047.1| hypothetical protein ARALYDRAFT_483247 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 430

 Score = 71.4 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 57/238 (23%), Positives = 92/238 (38%), Gaps = 28/238 (11%)

Query: 11  VNSIRARIHN----LAAWIKENNPDIICLQETKTEDKNFPFETLQS---LNY-HIETCGQ 62
           VN +RA +           +  N DI+CLQETK + K+   E ++      Y H      
Sbjct: 205 VNGLRALLKLESFSALQLAQRKNIDILCLQETKIQVKDV--EEIKKTLIDGYDHSFWSCS 262

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
            S  G +  +    ++I   L                T    +  + N Y+P+       
Sbjct: 263 VSKLGYSGTAIISRLDIALGLI--------------VTAEFDSFYLINTYVPNSG-DGLK 307

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +   +I    R L    + LE  +P++  GD N   +  D +NP   +  A FT+E RQS
Sbjct: 308 RLSYRIEEWDRTLSNHIKELEKSKPVVLTGDLNCAHEEIDVFNPAGNKRSAGFTIEERQS 367

Query: 183 FQKLQ-NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           F       GF D  R  H     Y++W Y    W +N+   I   ++S      + ++
Sbjct: 368 FGANFLAKGFVDTFRKQHLGVVGYTYWGYRHPWWPQNQQRFI--CLVSKLVKWSIIAS 423


>gi|257125492|ref|YP_003163606.1| endonuclease/exonuclease/phosphatase [Leptotrichia buccalis
           C-1013-b]
 gi|257049431|gb|ACV38615.1| Endonuclease/exonuclease/phosphatase [Leptotrichia buccalis
           C-1013-b]
          Length = 241

 Score = 71.4 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 55/273 (20%), Positives = 94/273 (34%), Gaps = 50/273 (18%)

Query: 5   TVATWNVNSIRARI---HNLAAWIKENNPDIICLQET-----KTEDKNFPFETLQSLNYH 56
            + T+N+    AR+     LA  +K+  PD I LQE      +++ ++   E  Q L Y 
Sbjct: 4   RLITYNIFG--ARLTNGKELAQSLKKYKPDFIGLQEVDRNTKRSKFRDVVQEMAQELGYS 61

Query: 57  IETCGQKSY-----NGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
                +         G+A +SKY    I  H    +   + + + A   I     +I  +
Sbjct: 62  YYYFQKAMDFDSGEYGIAFISKYDVKNIYIHQLPGNSKEKRQVLAARLKIEKFKKKILVV 121

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
                N + +   +           FA+      +     GD+N++P            N
Sbjct: 122 NTHLDNSLDNKNEE-------LADLFAAIEEFKGDIKFLCGDFNLLPTTEFYQKIAENWN 174

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
           D  F  +  ++   L+N                                 RID+IM   +
Sbjct: 175 DTYFEGKDLENKSNLENRNLETQ---------------------------RIDYIMAKKD 207

Query: 232 ATSLLH-SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +      S  I+   + WTK SDH P +  L+I
Sbjct: 208 SNYRTKQSFFINDDLQEWTKLSDHLPYMAILEI 240


>gi|294659648|ref|XP_462042.2| DEHA2G11814p [Debaryomyces hansenii CBS767]
 gi|199434123|emb|CAG90528.2| DEHA2G11814p [Debaryomyces hansenii]
          Length = 565

 Score = 71.4 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 5/66 (7%)

Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSPE-ATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
            +Y+ W+    +   N G RID I+ S +     +  A I     G    SDH P+    
Sbjct: 324 GMYTVWNTLTGARQSNYGSRIDLILTSSDVLLKSISKADIWPYIMG----SDHCPIFTDF 379

Query: 262 DIPEPR 267
           +I + +
Sbjct: 380 EIRDSK 385


>gi|152002965|gb|ABS19620.1| DNA lyase [Coccidioides posadasii]
          Length = 606

 Score = 71.4 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 4/65 (6%)

Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253
             +   D   +Y+ W+   ++   N G RID+++ S +       + I     G    SD
Sbjct: 256 CRKFHPDRLGMYTCWEQRVNARPGNYGARIDYVLCSVDMEDWFTESNIQEGLMG----SD 311

Query: 254 HTPVI 258
           H PV 
Sbjct: 312 HCPVY 316



 Score = 54.0 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 34/85 (40%), Gaps = 17/85 (20%)

Query: 4  VTVATWNVNSIR-----------ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52
          + + TWNVN IR                +   ++    DII  QETK + ++   + +  
Sbjct: 3  LRLTTWNVNGIRNPFSYQPWRENKSFERMFDILEG---DIIVFQETKIQKRDLRDDMVLI 59

Query: 53 LNYHIET---CGQKSYNGVAILSKY 74
            +         +K Y+GV I ++ 
Sbjct: 60 PGWDCFFSLPRHKKGYSGVVIYTRC 84


>gi|152002960|gb|ABS19616.1| DNA lyase [Coccidioides immitis]
          Length = 625

 Score = 71.4 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 4/65 (6%)

Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253
             +   D   +Y+ W+   ++   N G RID+++ S +       + I     G    SD
Sbjct: 275 CRKFHPDRLGMYTCWEQRVNARPGNYGARIDYVLCSVDMEDWFTESNIQEGLMG----SD 330

Query: 254 HTPVI 258
           H PV 
Sbjct: 331 HCPVY 335



 Score = 51.7 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/101 (20%), Positives = 35/101 (34%), Gaps = 30/101 (29%)

Query: 4   VTVATWNVN----SIRARI-----------------------HNLAAWIKENNPDIICLQ 36
           + + TWNVN     IRAR+                        +          DII  Q
Sbjct: 3   LRLTTWNVNGIRFGIRARLLCIYRTNDFLFRNPFSYQPWRENKSFERMFDILEGDIIVFQ 62

Query: 37  ETKTEDKNFPFETLQSLNYHIET---CGQKSYNGVAILSKY 74
           ETK + ++   + +    +         +K Y+GV I ++ 
Sbjct: 63  ETKIQKRDLRDDMVLIPGWDCFFSLPRHKKGYSGVVIYTRC 103


>gi|295085558|emb|CBK67081.1| Exonuclease III [Bacteroides xylanisolvens XB1A]
          Length = 361

 Score = 71.4 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/273 (13%), Positives = 83/273 (30%), Gaps = 34/273 (12%)

Query: 4   VTVATWNVNSIRARIHN-----LAAWIKENNPDIICLQET------KTEDKNFPFETLQS 52
           + + ++NV S            + +++ ++N DIICLQE       K   +    +  ++
Sbjct: 101 IKILSYNVMSFNNLEKKDGKNPVLSYLVDSNADIICLQEYNTATNKKYLTEQDIKKAFKA 160

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
             Y       K    +A  SK+  + I       + +   +++     +N  TL + N +
Sbjct: 161 YPYQSVHQQGKGDVQLACFSKFPILSIHPIEYESNYNGSMKYVLN---VNNDTLTLINNH 217

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
           L         +   +           +++++     +               + +     
Sbjct: 218 LESNKLTKEDRGMYEDMIK----DPNAKKVKTGLRQLIRKLAEASAIRATQADSVAKTIA 273

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYS------FWDYYADSWSKNKGIRIDHI 226
                                    T      ++         Y  + +      RID+I
Sbjct: 274 ESKYPTTIVCGDFNDGSISYTHRILTQKLDDAFTQSGKGLGISYNQNKFY----FRIDNI 329

Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
           ++SP   +   +  +D       K SDH P+  
Sbjct: 330 LISPNLKAY--NCTVDRSI----KASDHYPIWC 356


>gi|269865912|ref|XP_002652091.1| exodeoxyribonuclease III [Enterocytozoon bieneusi H348]
 gi|220063177|gb|EED41965.1| exodeoxyribonuclease III [Enterocytozoon bieneusi H348]
          Length = 218

 Score = 71.4 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 68/224 (30%), Gaps = 18/224 (8%)

Query: 40  TEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF 99
             D++     +++ +   +   ++ +  V +         +        + +     + +
Sbjct: 4   CSDESLIEAVMETYDKLTDVLNKEQHPVVILCGDMNATYSMCDNYLYMREYEQLHYVSEW 63

Query: 100 TINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159
           +++   +      +  G   T   Y       +  +        ++E  ++      +  
Sbjct: 64  SMSIDHISKVENPIQRGKLHTRDFYMKLQMSSENGIYTEKVAPRIDELPVYFLTKYDLYD 123

Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK 219
                    W  +                  F D  R  +     Y+ WD        N 
Sbjct: 124 HFMEKRQRQWLANLMK--------------TFVDTFRIGNKELFQYTCWDRVLRHRESNL 169

Query: 220 GIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           G RID+I+L   +   + SA I     G    SDH PV + +D+
Sbjct: 170 GTRIDYILLKTTSHYKIKSAEIRPDIYG----SDHCPVTLEIDM 209


>gi|269866283|ref|XP_002652219.1| exodeoxyribonuclease III [Enterocytozoon bieneusi H348]
 gi|220062934|gb|EED41837.1| exodeoxyribonuclease III [Enterocytozoon bieneusi H348]
          Length = 239

 Score = 71.4 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/227 (14%), Positives = 70/227 (30%), Gaps = 18/227 (7%)

Query: 40  TEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF 99
             D++     +++ +   +   ++ +  V +         +        + +     + +
Sbjct: 4   CSDESLIEAVMETYDKLTDVLNKEQHPVVILCGDMNATYSMCDNYLYMREYEQLHYVSEW 63

Query: 100 TINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159
           +++   +      +  G   T   Y       +  +        ++E  ++      +  
Sbjct: 64  SMSIDHISKVENPIQRGKLHTRDFYMKLQMSSENGIYTEKVAPRIDELPVYFLTKYDLYD 123

Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK 219
                    W  +                  F D  R  +     Y+ WD        N 
Sbjct: 124 HFMEKRQRQWLANLMK--------------TFVDTFRIGNKELFQYTCWDRVLRHRESNL 169

Query: 220 GIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEP 266
           G RID+I+L   +   + SA I     G    S+H PV + +DI EP
Sbjct: 170 GTRIDYILLKTTSHYKIKSAEIRPDIYG----SNHCPVTLEIDIGEP 212


>gi|260889134|ref|ZP_05900397.1| endonuclease/exonuclease/phosphatase family protein [Leptotrichia
           hofstadii F0254]
 gi|260861194|gb|EEX75694.1| endonuclease/exonuclease/phosphatase family protein [Leptotrichia
           hofstadii F0254]
          Length = 240

 Score = 71.4 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 42/266 (15%), Positives = 75/266 (28%), Gaps = 37/266 (13%)

Query: 5   TVATWNVNSIRARI-HNLAAWIKENNPDIICLQET-----KTEDKNFPFETLQSLNYHIE 58
            + T+N+   R      LA  IK+  PD + LQE      ++  ++   +    L Y+  
Sbjct: 4   RIMTYNIYGARLADGKKLAKSIKKYKPDFVALQEVDKNTKRSNFRDVTQDFALELGYNYY 63

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
              +                    +    +       +    +    +            
Sbjct: 64  YFQKAMDFDKGEFGIAFVS--KYDVKNIYVHELPSVGKEKRQVLAAQISSKYKKHILV-I 120

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
            T   Y+  +   +             +     GD+N++P            ND  F  +
Sbjct: 121 NTHLDYEPAVKSTQIDDLMTVIDYFKGDIKFLCGDFNLLPTTEYYRKIAENWNDTYFEGK 180

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH- 237
             ++   L+N                                 RID+IM           
Sbjct: 181 DLENKSNLENRNLETQ---------------------------RIDYIMAKKGENYRTKQ 213

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263
           S  I+   + WTK SDH P +V L+I
Sbjct: 214 SFFINDDSQEWTKLSDHLPYMVVLEI 239


>gi|222641992|gb|EEE70124.1| hypothetical protein OsJ_30144 [Oryza sativa Japonica Group]
          Length = 568

 Score = 71.4 bits (173), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 39/209 (18%), Positives = 64/209 (30%), Gaps = 29/209 (13%)

Query: 101 INTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP 160
            +     + N+Y P        +   K+ + K   R     L L + +   GD NI P  
Sbjct: 96  TDHGHFVLFNIYGPAVEEDDIERVRFKLLFYKILQRRWEHLLALGKRVFVVGDLNIAPSS 155

Query: 161 HDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG 220
            D  +         F   +R   ++     F        +    Y+ ++    +   N G
Sbjct: 156 IDRCDAQPGFEKQTFRKWLRSMLREHGGPFFDAFRSKHPERVGAYTCFNQKVGAEVYNYG 215

Query: 221 IRIDHIMLSPEATS-------------LLHSARIDTKPR---------------GWTKPS 252
            RIDHI++S                   +    I    R                  + S
Sbjct: 216 SRIDHILISGACFHHCGSVDDHSIFPCHVEECEIMDHFRRGNSENMSMWKGGRSSKLEGS 275

Query: 253 DHTPVIVSL-DIPEPRKKQQDSTSQNMKP 280
           DH PV + L +IPE       S++    P
Sbjct: 276 DHIPVYIVLNEIPELPVHNTPSSAARYLP 304


>gi|56755005|gb|AAW25685.1| SJCHGC04767 protein [Schistosoma japonicum]
          Length = 192

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/108 (25%), Positives = 45/108 (41%), Gaps = 2/108 (1%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS--LNYHIE 58
           M+ V V +WN+N +R+    L   +   + DIIC+QETKT                Y   
Sbjct: 1   MNPVRVCSWNINGLRSIQRPLKNILDSLSSDIICIQETKTTPDISSEFAFADGYNGYFTH 60

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
           +  +  Y+G AI  +     I T+    D+  ++ F E   +     L
Sbjct: 61  SIHKPGYSGTAIFCRNPLKPIRTYHNLSDILFESTFREDKSSNGWNFL 108


>gi|238505976|ref|XP_002384190.1| DNA lyase, putative [Aspergillus flavus NRRL3357]
 gi|220690304|gb|EED46654.1| DNA lyase, putative [Aspergillus flavus NRRL3357]
          Length = 630

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 26/72 (36%), Gaps = 4/72 (5%)

Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
           F        +   +Y+ W+   ++   N G RID+++ S         + I     G   
Sbjct: 265 FDICRSFHPNRRGMYTCWEQKINARPGNYGSRIDYVLCSLNMQDWFCESDIQEGLMG--- 321

Query: 251 PSDHTPVIVSLD 262
            SDH PV     
Sbjct: 322 -SDHCPVYAIFK 332



 Score = 41.3 bits (95), Expect = 0.14,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 23/62 (37%), Gaps = 3/62 (4%)

Query: 19 HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIE 78
            +   ++    DI+ LQETK + K+   + +    +       +S  G + +  Y    
Sbjct: 39 KAMFEILE---ADIVVLQETKIQRKDLRDDMVLVPGWDCHFSLPRSKKGYSGVVIYTRNA 95

Query: 79 IV 80
            
Sbjct: 96 TC 97


>gi|83773202|dbj|BAE63329.1| unnamed protein product [Aspergillus oryzae]
          Length = 636

 Score = 71.4 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 26/72 (36%), Gaps = 4/72 (5%)

Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
           F        +   +Y+ W+   ++   N G RID+++ S         + I     G   
Sbjct: 264 FDICRSFHPNRRGMYTCWEQKINARPGNYGSRIDYVLCSLNMQDWFCESDIQEGLMG--- 320

Query: 251 PSDHTPVIVSLD 262
            SDH PV     
Sbjct: 321 -SDHCPVYAIFK 331



 Score = 42.1 bits (97), Expect = 0.079,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 22/63 (34%)

Query: 18 IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPI 77
               A  +    DI+ LQETK + K+   + +    +       +S  G + +  Y   
Sbjct: 34 KRTFEAMFEILEADIVVLQETKIQRKDLRDDMVLVPGWDCHFSLPRSKKGYSGVVIYTRN 93

Query: 78 EIV 80
             
Sbjct: 94 ATC 96


>gi|302419937|ref|XP_003007799.1| DNA-(apurinic or apyrimidinic site) lyase [Verticillium albo-atrum
           VaMs.102]
 gi|261353450|gb|EEY15878.1| DNA-(apurinic or apyrimidinic site) lyase [Verticillium albo-atrum
           VaMs.102]
          Length = 334

 Score = 71.0 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 29/71 (40%), Gaps = 4/71 (5%)

Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
           +        D   +++ WD   ++   N G RID+++ S           ID+  +    
Sbjct: 254 WDICRCFHPDRKGMFTCWDTKRNTRPANNGARIDYLLCSAGIKDW----FIDSNIQEGLH 309

Query: 251 PSDHTPVIVSL 261
            SDH PV  +L
Sbjct: 310 GSDHCPVYGTL 320



 Score = 59.4 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 24/63 (38%), Gaps = 8/63 (12%)

Query: 5  TVATWNVNSIRA-------RIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56
           + TWNVN IR        R      A       DII  QETK + K+   + +    + 
Sbjct: 3  RITTWNVNGIRNPFGYQPWREKRTFEAMFDILEADIIIFQETKIQRKDLKDDMVLIPGWD 62

Query: 57 IET 59
          +  
Sbjct: 63 VYF 65


>gi|147826870|emb|CAN71106.1| hypothetical protein VITISV_000041 [Vitis vinifera]
          Length = 2009

 Score = 71.0 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/259 (13%), Positives = 76/259 (29%), Gaps = 30/259 (11%)

Query: 3    VVTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
            ++ + +WNV      ++   + A I+    D++C+QETK ++                  
Sbjct: 922  ILKLVSWNVRGANDSSKRKVIKAMIRSQXADLVCIQETKIQN------------------ 963

Query: 61   GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
                  GV              +                ++    L +G   +       
Sbjct: 964  ---MTEGVVRSIGSGRFLDWGAMGAQGSAGGILVCWDKRSLELLELEVGIYSISCKLKTV 1020

Query: 121  STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
                    + +        + L  EE     G ++        +N  + + D        
Sbjct: 1021 ENDVVWVFTGVYGPCNRKERELLWEELGAIRGIWDEPWCIGGDFNVTLSQRDRSRQGSXS 1080

Query: 181  QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
             + ++   +    A+        +YS+    +   +     R+D  ++S     +   A 
Sbjct: 1081 GAMRRFAQVVDDLALIDLPLQGGVYSW----SGGRNNQXWARLDRFLVSQGWLDIFRGAV 1136

Query: 241  IDTKPRGWTKPSDHTPVIV 259
                PR     SDH P+++
Sbjct: 1137 QCRLPR---PTSDHFPILL 1152


>gi|145351399|ref|XP_001420068.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144580301|gb|ABO98361.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 371

 Score = 71.0 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 48/318 (15%), Positives = 85/318 (26%), Gaps = 60/318 (18%)

Query: 4   VTVATWNVNSI--RARIH------------NLAAWIKENNPDIICLQET----------- 38
           ++ A+WN N +  R R               L+  +    PD+I LQE            
Sbjct: 14  LSFASWNANGLLNRIRDKSDPNGRRTRALLALSENVMRKRPDVIALQEVWLKCEEMGKGT 73

Query: 39  -------------KTEDKNFPFETLQSL----NYHIETCGQKSYNGVAILSKYQPIEIVT 81
                        K  D+    E L       NY    C   +     I    + +    
Sbjct: 74  GKWDHAKMGAEDKKLRDEKAFIEALMGRRPFKNYDAYYCLANARRAGVITMVKKCLAKPI 133

Query: 82  HLPGDDLDVQARFIEATFTINTQTLRI-----GNLYLPHGNPITSTKYDDKISWIKRFLR 136
            +                  N   + +       +   +     S     +   +  F  
Sbjct: 134 RVARTLALDGRDVTPDEIDTNEGRVLMLEYEKMIVLNTYVPHNGSNAERYEKRALWDFRV 193

Query: 137 FASQRLELEEPLI-FAGDYNIIPQPHDCYNPIIWENDACFT--LEVRQSFQKLQNMGFTD 193
                    +  + + GD N+  Q HD                 E R+    L      D
Sbjct: 194 QRFLENYRGKKDVVWMGDLNVAHQDHDVGPSPRLFEGVGGFTLPERRRFTDILAATDMVD 253

Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK--------- 244
             RA +     Y++           +G+R+D+ ++  +  + + S    T          
Sbjct: 254 TYRAFNGDRLTYTWRSTRGQGLDGWQGMRLDYFVVPRKLVARIKSCETSTDRFDDTTAQS 313

Query: 245 -PRGWTKPSDHTPVIVSL 261
            P      SDH  + +SL
Sbjct: 314 MPMSCFMDSDHCMIHLSL 331


>gi|111222126|ref|YP_712920.1| hypothetical protein FRAAL2705 [Frankia alni ACN14a]
 gi|111149658|emb|CAJ61351.1| hypothetical protein FRAAL2705 [Frankia alni ACN14a]
          Length = 235

 Score = 71.0 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/249 (16%), Positives = 75/249 (30%), Gaps = 20/249 (8%)

Query: 34  CLQETKTEDK-NFPFETLQSLNYHIETCGQK-SYNGVAILSKYQPIEIVTHLPGDDLDVQ 91
            L ETK     +   +      + +     +  + G  ++S+ +            L  +
Sbjct: 1   MLTETKDSAGCHLLADAFAGAGHQVVHRWPEYGHYGTMVVSRVEAEPDPFPDRVGYLAAR 60

Query: 92  ARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFA 151
           A        +    L    +     +   + +    ++     L  +        P +  
Sbjct: 61  AAAAAVPTDLGPLRLIGLYVPSRDASAEKTERKTKWLAACHAALAGSEHL-----PTVLL 115

Query: 152 GDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYY 211
           GD NI+   H    P           E       L      DA R  H T   YS+    
Sbjct: 116 GDLNILEPDHSPRYPFF------APFEYDFYRALLDEHCLVDAFRVLHPTDAAYSWVG-R 168

Query: 212 ADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271
           +       G R DH   S      + +     +PR  TK SDH+ + ++L IP  + +  
Sbjct: 169 SGD-----GYRYDHAFCSAALRDRVEACDYLDEPR-LTKLSDHSALTLTLTIPGAQPRPI 222

Query: 272 DSTSQNMKP 280
                  +P
Sbjct: 223 TVAGGADEP 231


>gi|307747195|gb|ADN90465.1| Hypothetical protein CJM1_0238 [Campylobacter jejuni subsp.
          jejuni M1]
          Length = 67

 Score = 71.0 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)

Query: 4  VTVATWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFET 49
          + + +WNVN +RA    N   WI +   D I  QE K  +  FP + 
Sbjct: 1  MKLLSWNVNGLRAICDKNALDWIAQEKIDFIGFQEIKAHEDKFPKKF 47


>gi|255531289|ref|YP_003091661.1| endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM
           2366]
 gi|255344273|gb|ACU03599.1| Endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM
           2366]
          Length = 278

 Score = 71.0 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/274 (13%), Positives = 69/274 (25%), Gaps = 41/274 (14%)

Query: 4   VTVATWNVNSIRARIHN-----------LAAWIKENNPDIICLQET-KTEDKNFPFETLQ 51
           + V ++N+      +                W+K   PDI+ LQE  K        E + 
Sbjct: 28  LRVISYNI------LEGMKNDTTKGKQVFVNWVKSYAPDILALQECNKFT--QLSLEEMA 79

Query: 52  S-LNYHIETCGQKSYNGVAILSKYQPIEIVT--HLPGDDLDVQARFIEATFTINTQTLRI 108
           +   +      + +   V I SKY  +++            V          ++    + 
Sbjct: 80  ARYGHPYAILVKTTGYPVGITSKYPIVDVQKITDNMTHGFIVCKIKDLNVIVLHLNPHKY 139

Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168
                  G  + +               F S     ++          + +    Y+   
Sbjct: 140 RKRREEIGEILGTMAVAPVRKRWMIMGDFNSFSPLDKDNYQDGDALKSLQEAAKKYSYHD 199

Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
              D        Q       +     I                          RID+I +
Sbjct: 200 NLVDGKSLDFQVQQQILDFGLKDAGKIVEPGGIPK-----------------RRIDYIYV 242

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
           S +    + +A            SDH PVI+   
Sbjct: 243 SKDLIKKVTTAHFIRDDF-TAGYSDHKPVIMEFK 275


>gi|2731767|gb|AAC53542.1| endonuclease/reverse transcriptase [Mus musculus]
 gi|3599334|gb|AAC72802.1| ORF2 [Mus musculus domesticus]
          Length = 1281

 Score = 71.0 bits (172), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 47/259 (18%), Positives = 81/259 (31%), Gaps = 32/259 (12%)

Query: 6   VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + N+N + + I    L  W+ + +P   CLQET   +K+  +  ++      +  G K
Sbjct: 17  LISLNINGLNSPIKRHRLTNWLHKQDPTFCCLQETHLREKDRHYLRMKGWKTIFQANGMK 76

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
              GVAIL   +                              + I    L     I +  
Sbjct: 77  KQAGVAILISDKIDFQPK--------------VIKKDKEGHFILIKGKILQEELSILNIY 122

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
             +  +           +  +    I  GD+N    P D         D     EV +  
Sbjct: 123 APNTRAATFTKETLVKLKAHIAPHTIIVGDFNTPLSPMDRSWKQKLNRDTLKLTEVMKQM 182

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
                   TD  R  +     Y+F+     ++SK     IDHI+      + L +  I  
Sbjct: 183 ------DLTDIYRTFYPKTKGYTFFSAPHGTFSK-----IDHIIGHKSGLNRLKNIEIVP 231

Query: 244 KPRGWTKPSDHTPVIVSLD 262
                   SDH  + +  +
Sbjct: 232 CIL-----SDHHALRLIFN 245


>gi|320104723|ref|YP_004180314.1| endonuclease/exonuclease/phosphatase [Isosphaera pallida ATCC
           43644]
 gi|319752005|gb|ADV63765.1| Endonuclease/exonuclease/phosphatase [Isosphaera pallida ATCC
           43644]
          Length = 390

 Score = 70.6 bits (171), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/276 (13%), Positives = 76/276 (27%), Gaps = 29/276 (10%)

Query: 3   VVTVATWNVNSI-RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
            + V T N   + R      AA++ ++ PD+I LQE   +        L +         
Sbjct: 140 TIRVVTLNT-GVGRFHAERFAAYVDQHGPDLIGLQE--AQSSEL-VNWLTNPG----DWF 191

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
                 +   S++    +       D   +              +R              
Sbjct: 192 TARQGELIFASRWPIERVELLDDRRDFGFRGTVAAVVVRSPWGPIR-WVNLHLRSPRDGL 250

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
           T            +    +R +L   +  +       +           N    +   R+
Sbjct: 251 TNAFYGNPQAIADMTLNLKRRDLGSQVASSWIRAQSARDGLPTIVCGDFNQPTQSYLFRR 310

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
            +    +      +   H      +++  +        G+RIDH++ SP          +
Sbjct: 311 DWGGFADAFQVAGLGYGH------TWFSSW-------HGLRIDHVLGSPS-HWNPRRCEV 356

Query: 242 DTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQN 277
               R     SDH PV+  L +  P +  +    Q 
Sbjct: 357 GPDMR-----SDHRPVLADLALRSPPEMNERGAYQR 387


>gi|312215074|emb|CBX95027.1| similar to DNA lyase [Leptosphaeria maculans]
          Length = 650

 Score = 70.6 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 26/69 (37%), Gaps = 4/69 (5%)

Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
           +        D   +++ W+   ++   N G RID I+ S E       A I     G   
Sbjct: 276 YDLCREYHPDREGMFTHWEQKINARPGNFGSRIDFILCSIEIKDWFMEANIQEGLMG--- 332

Query: 251 PSDHTPVIV 259
            SDH PV  
Sbjct: 333 -SDHCPVYA 340



 Score = 60.2 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 28/88 (31%), Gaps = 8/88 (9%)

Query: 3  VVTVATWNVNSIR--------ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
          +V + TWNVN IR        +      A       DI+ +QE K + K+   + +    
Sbjct: 1  MVRITTWNVNGIRNPFGYKPWSTNRTFNAMFDILQADIVIMQELKIQRKDLTDDMVLVPG 60

Query: 55 YHIETCGQKSYNGVAILSKYQPIEIVTH 82
          +       K   G              H
Sbjct: 61 FDCYFSLPKHKKGRYYSLGQSWTAHRHH 88


>gi|327269725|ref|XP_003219643.1| PREDICTED: 25-hydroxycholesterol 7-alpha-hydroxylase-like [Anolis
           carolinensis]
          Length = 929

 Score = 70.2 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 42/234 (17%), Positives = 67/234 (28%), Gaps = 25/234 (10%)

Query: 29  NPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDL 88
             DI+ LQET     +  +     L     +   +   GV +  K +    +     +  
Sbjct: 8   KFDIVALQETHIAQNHVSYLKNPKLGREFFSADARKKRGVVLYIKEKIEAELKFKDSEGR 67

Query: 89  DVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPL 148
            V          I    + + N                      + LR    + E E  +
Sbjct: 68  FVGVEISLGNRKILICNVYVPNGPKTQ---------------FIKELRDQITKSEAEHIM 112

Query: 149 IFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFW 208
           IF     ++    D                        +     D  R  + T   Y+F+
Sbjct: 113 IFGDFNGVLDPIQDKTRKTKRPKKDDCRRLPGNMLLMKEEFHLQDIWRYHNPTKRDYTFY 172

Query: 209 DYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
               DSWS     RID I  S    +     +I   PR     SDH P+ + L+
Sbjct: 173 SNRHDSWS-----RIDMIWASSSLLTNSIDIKIL--PRDK---SDHCPITMCLN 216


>gi|320036533|gb|EFW18472.1| DNA lyase [Coccidioides posadasii str. Silveira]
          Length = 600

 Score = 70.2 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 27/72 (37%), Gaps = 4/72 (5%)

Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
           +            +Y+ W+   ++   N G RID+I+ S +    +  A I     G   
Sbjct: 255 WDMCRSFFPARSGMYTCWEQRINARPGNFGARIDYILCSLDMKDWMSIADIQEGLMG--- 311

Query: 251 PSDHTPVIVSLD 262
            SDH PV     
Sbjct: 312 -SDHCPVYAIFK 322



 Score = 55.9 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 24/68 (35%), Gaps = 14/68 (20%)

Query: 3  VVTVATWNVNSIR-----------ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51
             + TWNVN IR                +   ++    DII LQE K + K+   + + 
Sbjct: 2  TFRLTTWNVNGIRNPFSYEPWRGTQSFQGMFDLLE---ADIIVLQELKIQRKDLRDDMVL 58

Query: 52 SLNYHIET 59
             +    
Sbjct: 59 VPGWDCFF 66


>gi|157344|gb|AAA28508.1| reverse transcriptase (put.); putative [Drosophila melanogaster]
          Length = 858

 Score = 70.2 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 44/281 (15%), Positives = 77/281 (27%), Gaps = 44/281 (15%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           M+ + +ATWN N +  R   LA ++ E + D++ L ET    K       Q  +YH    
Sbjct: 1   MATLRIATWNANGVSQRKLELAQFLHEKHIDVMLLSETHLTSK----YNFQIRDYHFYGT 56

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
                      +      +  H   +  +   +       ++  TL              
Sbjct: 57  NHPDGKAHGGTAILIRNRMKHHFYKEFAENHLQATSINIQLDDNTLLTLAAVYCPPRFTV 116

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
                           F      L    I AGDYN                    T+   
Sbjct: 117 LEAQ------------FLDFFQALGPHFIAAGDYNAKHTHWGSRLVNPKGKQLYKTI--- 161

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
                          +  H +    ++W    +         ID   ++   +  L  A 
Sbjct: 162 ----------IKATNKLDHVSPGSPTYWPSDLNKLPDL----ID-FAVTKNISRSLVKAE 206

Query: 241 IDTKPRGWTKPSDHTPVIVSL-----DIPEPRKKQQDSTSQ 276
                      SDH+PV++ L     ++  P +     T+ 
Sbjct: 207 CLPDLS-----SDHSPVLIHLRRYAENVKPPTRLTSSKTNW 242


>gi|3599347|gb|AAC72810.1| ORF2 [Mus musculus domesticus]
          Length = 1281

 Score = 70.2 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 82/259 (31%), Gaps = 32/259 (12%)

Query: 6   VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + N+N + + I    L  W+ + +P   CLQET   +K+  +  ++      +  G K
Sbjct: 17  LISLNINGLNSPIKRHRLTNWLHKQDPTFCCLQETHLREKDRHYLRMKGWKTIFQANGMK 76

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
              GVAIL   +                              + I    L     I +  
Sbjct: 77  KQAGVAILISDKIDFQPK--------------VIKKDKEGHFILIKGKILQEELSILNIY 122

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
             +  +           + ++    I  GD+N    P D         D    +EV +  
Sbjct: 123 APNTRAATFTKETLVKLKAQIAPHTIIVGDFNTPLSPMDRSWKQKLNRDTLKLIEVMKQM 182

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
                   TD  R  +     Y+F+     ++SK     IDHI+      +   +  I  
Sbjct: 183 ------DLTDIYRTFYPKTKGYTFFSAPHGTFSK-----IDHIIGHKSGLNRFKNIEIVP 231

Query: 244 KPRGWTKPSDHTPVIVSLD 262
                   SDH  + +  +
Sbjct: 232 CIL-----SDHHALRLIFN 245


>gi|164657069|ref|XP_001729661.1| hypothetical protein MGL_3205 [Malassezia globosa CBS 7966]
 gi|159103554|gb|EDP42447.1| hypothetical protein MGL_3205 [Malassezia globosa CBS 7966]
          Length = 317

 Score = 70.2 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 30/66 (45%), Gaps = 4/66 (6%)

Query: 196 RATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHT 255
               +   +Y+ W+   D+ + N G R+D+ +++      +  A I  +  G    SDH 
Sbjct: 72  HFFPERDRMYTCWNTLIDARASNYGTRLDYTLVTQGLEPWIQHADIQPQVHG----SDHC 127

Query: 256 PVIVSL 261
           P+ + L
Sbjct: 128 PIYLDL 133


>gi|198274048|ref|ZP_03206580.1| hypothetical protein BACPLE_00185 [Bacteroides plebeius DSM 17135]
 gi|198273126|gb|EDY97395.1| hypothetical protein BACPLE_00185 [Bacteroides plebeius DSM 17135]
          Length = 352

 Score = 70.2 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 38/268 (14%), Positives = 79/268 (29%), Gaps = 31/268 (11%)

Query: 3   VVTVATWNVNSIRARIHN--------LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           V+   T+NV      +          L  +I+E++ D++CLQE    D+    +      
Sbjct: 100 VMKFLTYNV----MHMQGDTEEEGYPLRRYIQESDADVVCLQEY-LWDEQKTKKVFPMYP 154

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           Y        + NG+  LS++  + +         +  +  ++     +T +L   +L   
Sbjct: 155 YRCL-LRASNENGMVCLSRFPIVSVKRIPY-VSANNASFLLQLKMKEDTLSLVCNHLESN 212

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
             +      Y+  +         +  +  L +                            
Sbjct: 213 KLDAHDKELYEGLLKSPNEQKVKSDSKYLLRKLADAVAIRAPQADSVAQVISRQSGKYLL 272

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG---IRIDHIMLSPE 231
              +   S     +      +   +        W      +S N+     RIDH+ +S  
Sbjct: 273 VCGDFNDSPISYAHHTIGKGLTDAYREAG----W---GPGFSYNRNFLYFRIDHLFVSKG 325

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIV 259
               +   R+D         SDH P+  
Sbjct: 326 F--RVLKCRVDNSI----SASDHYPLWC 347


>gi|322420097|ref|YP_004199320.1| endonuclease/exonuclease/phosphatase [Geobacter sp. M18]
 gi|320126484|gb|ADW14044.1| Endonuclease/exonuclease/phosphatase [Geobacter sp. M18]
          Length = 246

 Score = 70.2 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 45/282 (15%), Positives = 81/282 (28%), Gaps = 54/282 (19%)

Query: 1   MSV-VTVATWNVNS----------IRARIHNLAAWIKENNPDIICLQE-------TKTED 42
           MS+  +V T+NV+S          +R     +A  I   N DI+ LQE       T+  D
Sbjct: 1   MSMTFSVMTYNVHSCIGTDRKLSPLR-----IAEVIDRCNADIVALQELDAGLPRTQMTD 55

Query: 43  KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN 102
           +         +++H  +       G       +    +        D      E    + 
Sbjct: 56  QAHLIALTLEMSFHFHSSIHMMEGGYGNAVLSRGDVRLIKAGAIPADPLHPSFERRGAVW 115

Query: 103 TQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD 162
            +    G+            + +              +  E   P I  GD+N     + 
Sbjct: 116 VEVELGGHKIQVLATHFGLNRGERVSQARAVTGHEWLEHPECRHPAILCGDFNATAGSYV 175

Query: 163 CYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR 222
                   +D                       R T      +               +R
Sbjct: 176 YRLLTRHMHDVQR-------------GLKGRLPRGTWPAQFPF---------------MR 207

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
           IDH++ S +    + S  +   P      SDH P++ +L++P
Sbjct: 208 IDHLLASRDL--KVRSVSVPRTPLTRV-ASDHLPLVATLELP 246


>gi|299144762|ref|ZP_07037830.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 3_1_23]
 gi|298515253|gb|EFI39134.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 3_1_23]
          Length = 336

 Score = 70.2 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 38/273 (13%), Positives = 84/273 (30%), Gaps = 34/273 (12%)

Query: 4   VTVATWNVNSIRARIHN-----LAAWIKENNPDIICLQET------KTEDKNFPFETLQS 52
           + + ++NV S            + +++ ++N DIICLQE       K   +    + L++
Sbjct: 76  IKILSYNVMSFNNLEKKDGKNPVLSYLVDSNADIICLQEYNTATNKKYLTEQDIKKALKA 135

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
             Y       K    +A  SK+  + I       + +   +++     +N  TL + N +
Sbjct: 136 YPYQSVHQQGKGDVQLACFSKFPILSIHPIEYESNYNGSMKYVLN---VNNDTLTLINNH 192

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
           L         +   +           +++++     +               + +     
Sbjct: 193 LESNKLTKEDRGMYEDMIK----DPNAKKVKTGLRQLIRKLAEASAIRATQADSVAKTIA 248

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYS------FWDYYADSWSKNKGIRIDHI 226
                                    T      ++         Y  + +      RID+I
Sbjct: 249 ESKYPTTIVCGDFNDGSISYTHRILTQKLDDAFTQSGKGLGISYNQNKFY----FRIDNI 304

Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
           ++SP   +   +  +D       K SDH P+  
Sbjct: 305 LISPNLKAY--NCTVDRSI----KASDHYPIWC 331


>gi|256828980|ref|YP_003157708.1| Endonuclease/exonuclease/phosphatase [Desulfomicrobium baculatum
           DSM 4028]
 gi|256578156|gb|ACU89292.1| Endonuclease/exonuclease/phosphatase [Desulfomicrobium baculatum
           DSM 4028]
          Length = 837

 Score = 70.2 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 48/275 (17%), Positives = 77/275 (28%), Gaps = 43/275 (15%)

Query: 4   VTVATWNVN---SI--RARIHNLAAWIKENNPDIICLQETKT-------EDKNFPFETLQ 51
           V V T+NV+    I  +     +A  I + NPD++ LQE          ED+        
Sbjct: 569 VRVMTYNVHSCVGIDGKLAAERIARVIAQANPDVVALQELDAGRARTGGEDQAQRIAHYL 628

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
            + +H                       +         +    +E    I       G  
Sbjct: 629 EMQHHFHPHIHVENEKYGDAILTHLPMRIIKSGPLPGHLPGGKLEPRGAIWVAIDLHGTE 688

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
                  +  T  +  +            RL  ++P+I  GD+N +P             
Sbjct: 689 VNIVNTHLGLTSRERVLQIEALLGDDWLGRLNADQPVILCGDFNCVPSSKGYKLMRSRFL 748

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
           DA                     ++        YS       S+      RIDH+ + P 
Sbjct: 749 DA------------------QAELKEYRPVCTFYS----RLPSF------RIDHVFIQPG 780

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEP 266
               +    +          SDH P+I  L IP P
Sbjct: 781 I--QVTGITVPCSELAKV-ASDHLPLIADLTIPCP 812


>gi|160884105|ref|ZP_02065108.1| hypothetical protein BACOVA_02081 [Bacteroides ovatus ATCC 8483]
 gi|156110447|gb|EDO12192.1| hypothetical protein BACOVA_02081 [Bacteroides ovatus ATCC 8483]
          Length = 361

 Score = 70.2 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 38/273 (13%), Positives = 84/273 (30%), Gaps = 34/273 (12%)

Query: 4   VTVATWNVNSIRARIHN-----LAAWIKENNPDIICLQET------KTEDKNFPFETLQS 52
           + + ++NV S            + +++ ++N DIICLQE       K   +    + L++
Sbjct: 101 IKILSYNVMSFNNLEKKDGKNPVLSYLVDSNADIICLQEYNTATNKKYLTEQDIKKALKA 160

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
             Y       K    +A  SK+  + I       + +   +++     +N  TL + N +
Sbjct: 161 YPYQSVHQQGKGDVQLACFSKFPILSIHPIEYESNYNGSMKYVLN---VNNDTLTLINNH 217

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
           L         +   +           +++++     +               + +     
Sbjct: 218 LESNKLTKEDRGMYEDMIK----DPNAKKVKTGLRQLIRKLAEASAIRATQADSVAKTIA 273

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYS------FWDYYADSWSKNKGIRIDHI 226
                                    T      ++         Y  + +      RID+I
Sbjct: 274 ESKYPTTIVCGDFNDGSISYTHRILTQKLDDAFTQSGKGLGISYNQNKFY----FRIDNI 329

Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
           ++SP   +   +  +D       K SDH P+  
Sbjct: 330 LISPNLKAY--NCTVDRSI----KASDHYPIWC 356


>gi|3599339|gb|AAC72805.1| ORF2 [Mus musculus domesticus]
          Length = 1252

 Score = 70.2 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 80/259 (30%), Gaps = 32/259 (12%)

Query: 6   VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + N+N + + I    L  W+ + +P   CLQET   +K+  +  ++      +  G K
Sbjct: 17  LISLNINGLNSPIKRHRLTNWLHKQDPTFCCLQETHLREKDRHYLRMKGWKTIFQANGMK 76

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
              GVAIL   +                              + I    L     I +  
Sbjct: 77  KQAGVAILISDKIDFQPK--------------VIKKDKEGHFILIKGKILQEELSILNIY 122

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
             +  +           +  +    I  GD+N    P D         D     EV +  
Sbjct: 123 APNTRAATFTKETLVKLKAHIAPHTIIVGDFNTPLSPMDRSWKQKLNRDTLKLTEVMKQM 182

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
                   TD  R  +     Y+F+     ++SK     IDHI+      +   +  I  
Sbjct: 183 ------DLTDIYRTFYPKTKGYTFFSAPHGTFSK-----IDHIIGHKSGLNRFKNIEIVP 231

Query: 244 KPRGWTKPSDHTPVIVSLD 262
                   SDH  + +  +
Sbjct: 232 CIL-----SDHHALRLIFN 245


>gi|307826362|ref|ZP_07656566.1| Endonuclease/exonuclease/phosphatase [Methylobacter tundripaludum
          SV96]
 gi|307732603|gb|EFO03476.1| Endonuclease/exonuclease/phosphatase [Methylobacter tundripaludum
          SV96]
          Length = 76

 Score = 70.2 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 1/70 (1%)

Query: 4  VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
          + + T N NSIR+        W++  N DIIC+QETK +     F+    +N+H    G 
Sbjct: 1  MRIITLNANSIRSAGRKGFFTWMQPQNTDIICIQETKAQPYQLSFDPFFLVNHHRFYHGA 60

Query: 63 KSYNGVAILS 72
          +       L 
Sbjct: 61 EKKTLADWLY 70


>gi|260809051|ref|XP_002599320.1| hypothetical protein BRAFLDRAFT_199990 [Branchiostoma floridae]
 gi|229284597|gb|EEN55332.1| hypothetical protein BRAFLDRAFT_199990 [Branchiostoma floridae]
          Length = 278

 Score = 70.2 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/266 (12%), Positives = 75/266 (28%), Gaps = 30/266 (11%)

Query: 1   MSV--VTVATWNVNSI--RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56
           MS+  +++ + NV  +  + +  ++ ++I     D+I LQET   +              
Sbjct: 1   MSLCNLSLISLNVRGLLEKNKRSSILSYINRQKADVIFLQETHFTND------------- 47

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
             T    +        +         L           +    ++++    +    +  G
Sbjct: 48  --TRYVLTKEWQGPCFQSFGSNCSRGLAILIKPTLNFVLHDCNSVDSDGRTLVLNCIIEG 105

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
             +            +R   F    + L                            A   
Sbjct: 106 VELCLVNIYAPNKTKERNDFFKKASIWLNCHDPINLLCGGDMNCVQNPLVDKKGGRADTA 165

Query: 177 LEVRQSFQKLQN-MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
           L    + + L + +   DA R+ +     Y++      + ++N   R+D+ ++       
Sbjct: 166 LRSVTAMKNLCSKLDMCDAWRSVNPDTRQYTW-----RNLAQNVACRLDYWLIHKRLVEN 220

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
           +    I           DH  V + L
Sbjct: 221 IEKCDIRPAILT-----DHQAVFLKL 241


>gi|218186665|gb|EEC69092.1| hypothetical protein OsI_37986 [Oryza sativa Indica Group]
          Length = 470

 Score = 70.2 bits (170), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 47/157 (29%), Gaps = 10/157 (6%)

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +           +         + +         P        +          E R+  
Sbjct: 316 WGWSHFNQFNIGKGWEYANFSYKNINACEGIRFCPLYQCHNIIVDCGQPGFTLSERRRFG 375

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG--IRIDHIMLSPEATSLLHSARI 241
             L      DA R  H    +   + +      K +G  +RID+ ++S +    + S  I
Sbjct: 376 NILSQGKLVDAYRYLHKEKDMDCGFSWSGHPIGKYRGKRMRIDYFLVSEKLKDQIVSCDI 435

Query: 242 DTKPRGWT----KPSDHTPVIVSL--DIPEPRKKQQD 272
               RG        SDH PV + L  ++  P+ K  +
Sbjct: 436 H--GRGIELEGFYGSDHCPVSLELSEEVEAPKPKSSN 470



 Score = 51.3 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 4/41 (9%)

Query: 5   TVATWNVNSIRARIH----NLAAWIKENNPDIICLQETKTE 41
              TWN NS+  R+         ++   +PD+IC+QE +  
Sbjct: 61  RFVTWNANSLLLRMKSDWPAFCQFVSRVDPDVICVQEVRMP 101


>gi|3599320|gb|AAC72793.1| ORF2 [Mus musculus domesticus]
 gi|3599323|gb|AAC72795.1| ORF2 [Mus musculus domesticus]
          Length = 1281

 Score = 69.8 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 46/275 (16%), Positives = 85/275 (30%), Gaps = 34/275 (12%)

Query: 6   VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + N+N + + I    L  W+ + +P   CLQET   +K+  +  ++      +  G K
Sbjct: 17  LISLNINGLNSPIKRHRLTNWLHKQDPTFCCLQETHLREKDRHYLRMKGWKTIFQANGMK 76

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
              GVAIL   +                              + I    L     I +  
Sbjct: 77  KQAGVAILISDKIDFQPK--------------VIKKDKEGHFILIKGKILQEELSILNIY 122

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
             +  +           +  +    I  GD+N    P D         D     EV +  
Sbjct: 123 APNTRAATFTKETLVKLKAHIAPHTIIVGDFNTPLSPMDRSWKQKLNRDTLKLTEVMKQM 182

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
                   TD  R  +     Y+F+     ++SK     IDHI+      +   +  I  
Sbjct: 183 ------DLTDIYRTFYPKTKGYTFFSAPHGTFSK-----IDHIIGHKSGLNRFKNIEIVP 231

Query: 244 KPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278
                   SDH  + +  +       ++ + +  +
Sbjct: 232 CIL-----SDHHALRLIFN--NKINNRKPTLTWKL 259


>gi|3599342|gb|AAC72807.1| ORF2 [Mus musculus domesticus]
          Length = 1281

 Score = 69.8 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 80/259 (30%), Gaps = 32/259 (12%)

Query: 6   VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + N+N + + I    L  W+ + +P   CLQET   +K+  +  ++      +  G K
Sbjct: 17  LISLNINGLNSPIKRHRLTNWLHKQDPTFCCLQETHLREKDRHYLRMKGWKTIFQANGMK 76

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
              GVAIL   +                              + I    L     I +  
Sbjct: 77  KQAGVAILISDKIDFQPK--------------VIKKDKEGHFILIKGKILQEELSILNIY 122

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
             +  +           +  +    I  GD+N    P D         D     EV +  
Sbjct: 123 APNTRAATFTKETLVKLKAHIAPHTIIVGDFNTPLSPMDRSWKQKLNRDTLKLTEVMKQM 182

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
                   TD  R  +     Y+F+     ++SK     IDHI+      +   +  I  
Sbjct: 183 ------DLTDIYRTFYPKTKGYTFFSAPHGTFSK-----IDHIIGHKSGLNRFKNIEIVP 231

Query: 244 KPRGWTKPSDHTPVIVSLD 262
                   SDH  + +  +
Sbjct: 232 CIL-----SDHHALRLIFN 245


>gi|3599336|gb|AAC72803.1| ORF2 [Mus musculus domesticus]
          Length = 1281

 Score = 69.8 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 80/259 (30%), Gaps = 32/259 (12%)

Query: 6   VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + N+N + + I    L  W+ + +P   CLQET   +K+  +  ++      +  G K
Sbjct: 17  LISLNINGLNSPIKRHRLTNWLHKQDPTFCCLQETHLREKDRHYLRMKGWKTIFQANGMK 76

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
              GVAIL   +                              + I    L     I +  
Sbjct: 77  KQAGVAILISDKIDFQPK--------------VIKKDKEGHFILIKGKILQEELSILNIY 122

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
             +  +           +  +    I  GD+N    P D         D     EV +  
Sbjct: 123 APNTRAATFTKETLVKLKAHIAPHTIIVGDFNTPLSPMDRSWKQKLNRDTLKLTEVMKQM 182

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
                   TD  R  +     Y+F+     ++SK     IDHI+      +   +  I  
Sbjct: 183 ------DLTDIYRTFYPKTKGYTFFSAPHGTFSK-----IDHIIGHKSGLNRFKNIEIVP 231

Query: 244 KPRGWTKPSDHTPVIVSLD 262
                   SDH  + +  +
Sbjct: 232 CIL-----SDHHALRLIFN 245


>gi|46205899|ref|ZP_00210081.1| COG0708: Exonuclease III [Magnetospirillum magnetotacticum MS-1]
 gi|46205900|ref|ZP_00210082.1| COG0708: Exonuclease III [Magnetospirillum magnetotacticum MS-1]
          Length = 180

 Score = 69.8 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 39/177 (22%), Positives = 68/177 (38%), Gaps = 6/177 (3%)

Query: 2   SVVTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
            V+T+AT NVN IRA     + AWI    PD++ LQE +  D     + L+  +   + C
Sbjct: 3   RVLTLATANVNGIRAAYRRGMDAWIASRTPDVLLLQEVRAPDS-VVNDLLEGWHVAHQAC 61

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR----FIEATFTINTQTLRIGNLYLPHG 116
             K   GVA+ S+     +   L   + +                +   L + + Y+  G
Sbjct: 62  DIKGRAGVAVASRLPVSAVRVGLGAGEPEPPVDTGRWVEADLELPDGGRLTVVSAYIHSG 121

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
                     K +++++      +     E ++ AG+ NI  +  D  N       A
Sbjct: 122 TVSQPETMVAKYAYLEKVTARLRELAATGEKVVLAGELNIAHRNVDIKNWKGNLKSA 178


>gi|3599326|gb|AAC72797.1| ORF2 [Mus musculus domesticus]
          Length = 1281

 Score = 69.8 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 80/259 (30%), Gaps = 32/259 (12%)

Query: 6   VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + N+N + + I    L  W+ + +P   CLQET   +K+  +  ++      +  G K
Sbjct: 17  LISLNINGLNSPIKRHRLTNWLHKQDPTFCCLQETHLREKDRHYLRMKGWKTIFQANGMK 76

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
              GVAIL   +                              + I    L     I +  
Sbjct: 77  KQAGVAILISDKIDFQPK--------------VIKKDKEGHFILIKGKILQEELSILNIY 122

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
             +  +           +  +    I  GD+N    P D         D     EV +  
Sbjct: 123 APNTRAATFTKETLVKLKAHIAPHTIIVGDFNTPLSPMDRSWKQKLNRDTLKLTEVMKQM 182

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
                   TD  R  +     Y+F+     ++SK     IDHI+      +   +  I  
Sbjct: 183 ------DLTDIYRTFYPKTKGYTFFSAPHGTFSK-----IDHIIGHKSGLNRFKNIEIVP 231

Query: 244 KPRGWTKPSDHTPVIVSLD 262
                   SDH  + +  +
Sbjct: 232 CIL-----SDHHALRLIFN 245


>gi|46129427|ref|XP_389065.1| hypothetical protein FG08889.1 [Gibberella zeae PH-1]
          Length = 609

 Score = 69.8 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 27/71 (38%), Gaps = 4/71 (5%)

Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
           +        +   + + WD   ++   N G RID+++ S    S  + + I     G   
Sbjct: 255 WDLCRCFHPERAGMNTCWDTKRNTRPANNGSRIDYVLCSDGIKSWFNFSNIQEGLMG--- 311

Query: 251 PSDHTPVIVSL 261
            SDH PV    
Sbjct: 312 -SDHCPVFAIF 321



 Score = 42.1 bits (97), Expect = 0.094,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 33/88 (37%), Gaps = 15/88 (17%)

Query: 5  TVATWN---VNSIR---------ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52
           + TWN   ++  R          R  ++   ++    DI+ +QETK + K+   E +  
Sbjct: 4  RLTTWNGEFIHFFRGPHTNTFCSQRHQSMFDILE---ADIVVMQETKIQQKDLLDEMVLV 60

Query: 53 LNYHIETCGQKSYNGVAILSKYQPIEIV 80
            + +     K   G + ++ Y      
Sbjct: 61 PGWDVFFSLPKHKKGYSGVAIYTRNSTC 88


>gi|325299447|ref|YP_004259364.1| Endonuclease/exonuclease/phosphatase [Bacteroides salanitronis DSM
           18170]
 gi|324319000|gb|ADY36891.1| Endonuclease/exonuclease/phosphatase [Bacteroides salanitronis DSM
           18170]
          Length = 358

 Score = 69.8 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 40/272 (14%), Positives = 77/272 (28%), Gaps = 33/272 (12%)

Query: 3   VVTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQE----TKTEDKNFPFETLQSL 53
            +   T+N   I         + + ++++    DI+CLQE         +    + L+ +
Sbjct: 101 TLKFLTYNTQGISPGEGNGGENAVLSYLRRCGADIVCLQEFIPGVHASAEEI-SQALEDI 159

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
             H  +   K  + +A  S+Y  +E          +    +           +       
Sbjct: 160 YPHHASTRIKGGDVLACYSRYPILETEEIAYPSLYNGSVLYRIKVGEDTLAVI----NNH 215

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
              N + +         +K       +          A    +     D     I EN A
Sbjct: 216 LESNKLDAYDKKVYNEILKSPREANVKAEGKHLLRKLADAVALRAPQADSVARAIRENRA 275

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDT------HHLYSFWDYYADSWSKNKGIRIDHIM 227
            + L          +  +        D          +++          +   RIDHI 
Sbjct: 276 DYMLVCGDFNDSPVSYAYRVIGEGLDDAFVAAGAGPGFTYN-------QNHLYFRIDHIF 328

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
           +SP     +   ++D   R     SDH PV  
Sbjct: 329 VSPAF--RVLECKVDRSIR----ASDHYPVWC 354


>gi|317478347|ref|ZP_07937511.1| endonuclease/Exonuclease/phosphatase [Bacteroides sp. 4_1_36]
 gi|316905506|gb|EFV27296.1| endonuclease/Exonuclease/phosphatase [Bacteroides sp. 4_1_36]
          Length = 366

 Score = 69.8 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 40/271 (14%), Positives = 79/271 (29%), Gaps = 27/271 (9%)

Query: 4   VTVATWNVNSIRARIHN-----LAAWIKENNPDIICLQET-------KTEDKNFPFETLQ 51
           + + ++N+              +  ++KE+  DI+CLQE            K+   E L+
Sbjct: 102 IKLLSYNIMGFDGAAKQDGKNPILTYLKESGADILCLQEYSTVQSSKHLSQKDVERE-LK 160

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
           +  YH              ++ Y    I++    D        +     I   T+ + N 
Sbjct: 161 AYPYHRINTVGSGKGHTNKIACYSKFPILSSRILDYPSEYNGSVLYEIKIGEDTVTLINN 220

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
           +L       + K   +            ++++    L+               + I  E 
Sbjct: 221 HLESNKLTKADKVVYEDMLK----SPEKEKVKSGARLLIRKLAEASAIRAPQADTIAHEI 276

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI---RIDHIML 228
            A     +                    D    ++         S N+     RID+I+ 
Sbjct: 277 TASPHPYIIVCGDFNDTPISYTHRTIAQDLDDAFTQ-SGRGLGISYNQNRFYFRIDNILT 335

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
           S       ++  +D       K SDH P+  
Sbjct: 336 SKNL--RAYNCTVDRSI----KESDHYPIWC 360


>gi|224023542|ref|ZP_03641908.1| hypothetical protein BACCOPRO_00244 [Bacteroides coprophilus DSM
           18228]
 gi|224016764|gb|EEF74776.1| hypothetical protein BACCOPRO_00244 [Bacteroides coprophilus DSM
           18228]
          Length = 356

 Score = 69.8 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 47/271 (17%), Positives = 84/271 (30%), Gaps = 26/271 (9%)

Query: 2   SVVTVATWNV---NSIR----ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           ++V + T+NV   N  R    A   N+  +++++  DIICLQE  + +K    +      
Sbjct: 99  TLVKLLTYNVMNTNLSRPEEGAEEGNIVTYLEQSEADIICLQEITSSEKQL-RKAFPMYP 157

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           Y +   G  + NGVA LSKY  +           +  A F           +   +L   
Sbjct: 158 Y-VRRIGFATANGVACLSKYPILSAKRIEYASAFNGSALFRLKIGKDTVTLIN-NHLESN 215

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
             +      Y + +          S +    +                        +   
Sbjct: 216 KLDAGDKALYKELLKSPDEEKVKTSGKYLWHKLADAVAIRAAQADSVAKVIAEYGYDRML 275

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI---RIDHIMLSPE 231
              +   S            ++  +               +S N+ +   RIDHI+   +
Sbjct: 276 VCGDFNDSPLSYARRVIARGLQDAYVERGN-------GPGFSYNQNLLYFRIDHILAGTD 328

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
               +    +D   R     SDH PV   L+
Sbjct: 329 F--RILHCEVDRSIRT----SDHYPVWCLLE 353


>gi|169595532|ref|XP_001791190.1| hypothetical protein SNOG_00506 [Phaeosphaeria nodorum SN15]
 gi|111070881|gb|EAT92001.1| hypothetical protein SNOG_00506 [Phaeosphaeria nodorum SN15]
          Length = 377

 Score = 69.8 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 58/324 (17%), Positives = 108/324 (33%), Gaps = 68/324 (20%)

Query: 2   SVVTVATWNVNSIRARI-HNLAAWIKENNP----D------------------IICLQE- 37
           + + + +WNVN I   +  ++ ++   ++P    D                  I+ LQE 
Sbjct: 40  NSIRIFSWNVNGIAPFLQKSIKSFFAASDPQDKEDNIPPPSLRGILQRHKWPSILFLQEV 99

Query: 38  ------TKTEDK-------NFPFE-TLQSLNYHIETCGQKSYNG-------------VAI 70
                 TKT+D         FP E   +   Y          +               +I
Sbjct: 100 KIATKDTKTQDAVKAAVNTKFPSETDDEGPTYEAHFTLPNDPHNARGLRGSGKLYGVCSI 159

Query: 71  LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG----------NPIT 120
           L          ++   D D + R      T  +  L I N+Y  +G            +T
Sbjct: 160 LRTDLQNPYQINIRTVDWDKEGRISIVQLTGKSAKLAIFNIYAVNGTSNPYRDPTTGVVT 219

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP--QPHDCYNPIIWENDACFTLE 178
            T++D K+ + +  ++           ++ AGD N+ P  +          +  A    +
Sbjct: 220 GTRHDRKLQFHRLLMQECLDLEAAGWRVLLAGDMNVAPDARDGHPKLRTFPKQHALNRAD 279

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL--L 236
             + F +   +G  D  R  H     Y+++      W  +   R+D+++    A     +
Sbjct: 280 FHERFLEGTGLGGVDVWREMHGNERRYTYYP-RGREWGSSCD-RVDYVVAGRGAWDAGMV 337

Query: 237 HSARIDTKPRGWTKPSDHTPVIVS 260
            ++ I     G    SDH PV V 
Sbjct: 338 KASGIL-DTEGERGMSDHCPVWVD 360


>gi|298708328|emb|CBJ48391.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 462

 Score = 69.8 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 6/66 (9%)

Query: 2   SVVTVATWNVNSIRA-RIHNLA---AWIKENNPDIICLQETKTEDKNFPFETLQSL--NY 55
           +  TV +WNVN +RA     L      +++  PDI+CLQETK ++K+      Q +   Y
Sbjct: 74  TTFTVLSWNVNGVRATAKKGLEPLRRMVEKEMPDIVCLQETKIQEKDVEALRAQDILPGY 133

Query: 56  HIETCG 61
             E   
Sbjct: 134 ASEWSC 139



 Score = 66.3 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 61/198 (30%), Gaps = 38/198 (19%)

Query: 100 TINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159
           T+  +   +  +Y+P+              W      +        +P++  GD N+   
Sbjct: 264 TVEYEKFFVVTVYVPNSGEKLVRLDYRTKEWDVALKAYVESLEAQGKPVVLNGDLNVAHL 323

Query: 160 PHDCYNP---IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSW 215
             D YN     + +N A    E       +     +DA R  H      Y++W     + 
Sbjct: 324 DLDIYNRGAKHLPKNAATTKEERDSFDSWVNGGKVSDAFRRLHPDAEGAYTYWSVRTGAR 383

Query: 216 SKNKGIRIDHIMLSPEATS--------------------------------LLHSARIDT 243
             N+G+R+D+ + S                                     ++H   +  
Sbjct: 384 PVNRGLRLDYFVCSNAVFEDGAAGGGQAKATARRAKGSAPKGKGATGAKGMVVHDCFMLD 443

Query: 244 KPRGWTKPSDHTPVIVSL 261
           +       SDH P+ ++L
Sbjct: 444 EATVGV--SDHCPIGITL 459


>gi|3599329|gb|AAC72799.1| ORF2 [Mus musculus domesticus]
          Length = 1281

 Score = 69.8 bits (169), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 46/251 (18%), Positives = 77/251 (30%), Gaps = 32/251 (12%)

Query: 6   VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + N+N + + I    L  W+ + +P   CLQET   +K+  +  ++      +  G K
Sbjct: 17  LISLNINGLNSPIKRHRLTNWLHKQDPTFCCLQETHLREKDRHYLRMKGWKTIFQANGMK 76

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
              GVAIL   +                              + I    L     I +  
Sbjct: 77  KQAGVAILISDKIDFQPK--------------VIKKDKEGHFILIKGKILQEELSILNIY 122

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
             +  +           +  +    I  GD+N    P D         D     EV +  
Sbjct: 123 APNTRAATFTKETLVKLKAHIAPHTIIVGDFNTPLSPMDRSWKQKLNRDTLKLTEVMKQM 182

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
                   TD  R  +     Y+F+     ++SK     IDHI+      +   +  I  
Sbjct: 183 ------DLTDIYRTFYPKTKGYTFFSAPHGTFSK-----IDHIIGHKSGLNRFKNIEIVP 231

Query: 244 KPRGWTKPSDH 254
                   SDH
Sbjct: 232 CIL-----SDH 237


>gi|225454561|ref|XP_002267349.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 1212

 Score = 69.4 bits (168), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 34/260 (13%), Positives = 77/260 (29%), Gaps = 32/260 (12%)

Query: 4   VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + TWNV      ++   +  +I+    D++C+QETK ++                + G
Sbjct: 3   MKIITWNVRGANDSSKRKIIKNYIRNQRVDLMCIQETKIQE---------------MSEG 47

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
                G+   S ++         G  +    R +E       Q        +     I  
Sbjct: 48  IVRSLGLGRFSDWRARNAEGAAGGILICWDKRVLEILDWEEGQFSLSCRFKITENGAIWV 107

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
                                  EE     G +         +N  +++++      +  
Sbjct: 108 FTGVYGPFTKVEREG------MWEELGAIRGLWGDPWCLGGDFNITLFQHERSSQRRISS 161

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSAR 240
           + ++   +     +         +++          N+   R+D  ++SP          
Sbjct: 162 AMRRFAQIVDDLELVDLPLQGGEFTW-----SGGLNNQAWARLDRFLVSPSWLDQFSGV- 215

Query: 241 IDTKPRGWTKPSDHTPVIVS 260
             T+ R     SDH P+++ 
Sbjct: 216 --TQGRLSRPTSDHFPIVLE 233


>gi|225431035|ref|XP_002273445.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 701

 Score = 69.4 bits (168), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 33/261 (12%), Positives = 77/261 (29%), Gaps = 30/261 (11%)

Query: 1   MSVVTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
              + + +WNV      ++   + A I+    D++C+QETK +                 
Sbjct: 72  FMKIKLVSWNVRGANDSSKRKVIKAMIRSQRADLVCIQETKIQ----------------- 114

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
                   GV              +                ++    + +GN  +     
Sbjct: 115 ----TMTEGVVRSLGSGRFLDWGAMGAQGSAGGILVCWDKRSLELLEMEVGNYSISCRLK 170

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
               +     + +        + +  EE     G ++        +N  + + D      
Sbjct: 171 NVENEVVWTFTGVYGPCNRKEREMLWEELGAIRGIWDEPWCIGGDFNVTLSQRDRSRQGS 230

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           +  + ++   +    A+        +YS+    +   +     R+D  ++S     +   
Sbjct: 231 LNGAMRRFAQVVDDLALIDLPLQGGVYSW----SGGRNNQTWARLDRFLVSQGWLDIFRG 286

Query: 239 ARIDTKPRGWTKPSDHTPVIV 259
           A     PR     SDH P+++
Sbjct: 287 AVQCRLPR---PTSDHFPILL 304


>gi|2193870|dbj|BAA20419.1| reverse transcriptase [Mus musculus]
          Length = 1300

 Score = 69.4 bits (168), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 47/259 (18%), Positives = 80/259 (30%), Gaps = 32/259 (12%)

Query: 6   VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + N+N + + I    L  W+ + +P   CLQET   +K+  +  ++      +  G K
Sbjct: 36  LISLNINGLNSPIKRHRLTNWLHKQDPTFCCLQETHLREKDRHYLRMKGWKTIFQANGMK 95

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
              GVAIL   +                              + I    L     I +  
Sbjct: 96  KQAGVAILISDKIDFQPK--------------VIKKDKEGHFILIKGKILQEELSILNIY 141

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
             +K +           +  +    I  GD+N    P D         D     EV +  
Sbjct: 142 APNKRAATFTKETLVKLKAHIAPHTIIVGDFNTPLSPMDRSWKQKLNRDTLKLTEVMKQM 201

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
                   TD  R        Y+F+     ++SK     IDHI+      +   +  I  
Sbjct: 202 ------DLTDIYRTFFPKTKGYTFFSAPHGTFSK-----IDHIIGHKSGLNRFKNIEIVP 250

Query: 244 KPRGWTKPSDHTPVIVSLD 262
                   SDH  + +  +
Sbjct: 251 CIL-----SDHHALRLIFN 264


>gi|229088752|ref|ZP_04220309.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-44]
 gi|228694577|gb|EEL47996.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-44]
          Length = 248

 Score = 69.4 bits (168), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 47/267 (17%), Positives = 90/267 (33%), Gaps = 40/267 (14%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET----KTEDKNFPFETLQSLN 54
           +   TWN   IR      RI  +A  ++++ PD++ + E     K +      E L+   
Sbjct: 7   LKTLTWN---IRQGGSEKRIPLIAEQLQKHAPDVLVVTEYWEGKKGDRLQ---ELLRDAG 60

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           Y         +   +IL        V          + R++E         +   ++   
Sbjct: 61  YVYMETSGGQFKQNSILIASLHEFEVVPSFYKREMNKERWLEIKLVKQGLHILAVHIPTN 120

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
           + NP     +  +++   R        +  +       D    P     Y          
Sbjct: 121 NHNPQEKLDFWKEVNAFAREHSNTKSIIIGDFNTGLPEDAQGAPFYGANY---------- 170

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
                    ++L ++G+TDA R TH + + YS++    + +      RIDH  +S     
Sbjct: 171 --------MKELIDLGWTDAWRHTHGSFNGYSWYSNTENGF------RIDHAFVSSSLKD 216

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261
            +  A    + R     SDH+ ++V  
Sbjct: 217 AILEAYFSHRER-LLGYSDHSVLVVEF 242


>gi|126296|sp|P08548|LIN1_NYCCO RecName: Full=LINE-1 reverse transcriptase homolog
 gi|225048|prf||1207289B reverse transcriptase related protein
          Length = 1260

 Score = 69.4 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 51/261 (19%), Positives = 85/261 (32%), Gaps = 32/261 (12%)

Query: 4   VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           +++ + NVN +    + H LA WI++  PDI C+QE+    K+     ++  +   +  G
Sbjct: 7   LSIFSINVNGLNCPLKRHRLADWIQKLKPDICCIQESHLTLKDKYRLKVKGWSSIFQANG 66

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           ++   G+AIL         T +  D           T       + I          I  
Sbjct: 67  KQKKAGIAILFADAIGFKPTKIRKDKDGHFIFVKGNTQYDEISIINIYAPNHNAPQFI-- 124

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
                                 +    I  GD+N      D  +            E+  
Sbjct: 125 ------------RETLTDMSNLISSTSIVVGDFNTPLAVLDRSSKKKLSK------EILD 166

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
               +Q++  TD  R  H     Y+F+     ++SK     IDHI+      S      I
Sbjct: 167 LNSTIQHLDLTDIYRTFHPNKTEYTFFSSAHGTYSK-----IDHILGHKSNLSKFKKIEI 221

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
                     SDH  + V L+
Sbjct: 222 IPCI-----FSDHHGIKVELN 237


>gi|160891549|ref|ZP_02072552.1| hypothetical protein BACUNI_04001 [Bacteroides uniformis ATCC 8492]
 gi|156858956|gb|EDO52387.1| hypothetical protein BACUNI_04001 [Bacteroides uniformis ATCC 8492]
          Length = 366

 Score = 69.4 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 40/271 (14%), Positives = 79/271 (29%), Gaps = 27/271 (9%)

Query: 4   VTVATWNVNSIRARIHN-----LAAWIKENNPDIICLQET-------KTEDKNFPFETLQ 51
           + + ++N+              +  ++KE+  DI+CLQE            K+   E L+
Sbjct: 102 IKLLSYNIMGFDGAAKQDGKNPILTYLKESGADILCLQEYSTVQSSKHLSQKDVERE-LK 160

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
           +  YH              ++ Y    I++    D        +     I   T+ + N 
Sbjct: 161 AYPYHRINTVGSGKGHTNKIACYSKFPILSSRILDYPSEYNGSVLYEIKIEEDTVTLINN 220

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
           +L       + K   +            ++++    L+               + I  E 
Sbjct: 221 HLESNKLTKADKVVYEDMLK----SPEKEKVKSGARLLIRKLAEASAIRAPQADTIAHEI 276

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI---RIDHIML 228
            A     +                    D    ++         S N+     RID+I+ 
Sbjct: 277 AASPHPYIIVCGDFNDTPISYAHRTIAQDLDDAFTQ-SGRGLGISYNQNRFYFRIDNILT 335

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
           S       ++  +D       K SDH P+  
Sbjct: 336 SKNL--RAYNCTVDRSI----KESDHYPIWC 360


>gi|270295351|ref|ZP_06201552.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|270274598|gb|EFA20459.1| conserved hypothetical protein [Bacteroides sp. D20]
          Length = 366

 Score = 69.4 bits (168), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 40/271 (14%), Positives = 79/271 (29%), Gaps = 27/271 (9%)

Query: 4   VTVATWNVNSIRARIHN-----LAAWIKENNPDIICLQET-------KTEDKNFPFETLQ 51
           + + ++N+              +  ++KE+  DI+CLQE            K+   E L+
Sbjct: 102 IKLLSYNIMGFDGAAKQDGKNPILTYLKESGADILCLQEYSTVQSSKHLSQKDVERE-LK 160

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
           +  YH              ++ Y    I++    D        +     I   T+ + N 
Sbjct: 161 AYPYHRINTVGSGKGHTNKIACYSKFPILSSRILDYPSEYNGSVLYEIKIGEDTVTLINN 220

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
           +L       + K   +            ++++    L+               + I  E 
Sbjct: 221 HLESNKLTKADKVVYEDMLK----SPEKEKVKSGARLLIRKLAEASAIRAPQADTIAHEI 276

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI---RIDHIML 228
            A     +                    D    ++         S N+     RID+I+ 
Sbjct: 277 AASPHPYIIVCGDFNDTPISYTHRTIAQDLDDAFTQ-SGRGLGISYNQNRFYFRIDNILT 335

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
           S       ++  +D       K SDH P+  
Sbjct: 336 SKNL--RAYNCTVDRSI----KESDHYPIWC 360


>gi|326676501|ref|XP_003200593.1| PREDICTED: hypothetical protein LOC497432 [Danio rerio]
          Length = 1288

 Score = 69.0 bits (167), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 28/261 (10%), Positives = 71/261 (27%), Gaps = 24/261 (9%)

Query: 3   VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
            +   TWN N ++                D++ LQET     +     ++ L        
Sbjct: 5   TINFITWNANGLKQNKYQKFQEL---QCADVVFLQETHIGAGD--EHVIEGLKKRWNVFY 59

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
            K  +  +  +      +       +      ++     +      + ++Y    +  T 
Sbjct: 60  TKYNSSSSGTAILVRKSLDFKCLSVEKGNCGEYVLLKCELEGCLYTLVSVYNHQTDTKTL 119

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
                 +  +   L                 +  + P     ++      +      +  
Sbjct: 120 DNLSRYLQSMTTGLLVIGGDF----------NTFLNPFIDKKWSTGKMTKNRMHNKLLLC 169

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
               ++++   D  R  +     ++F+             R+D+  +  E    + S  I
Sbjct: 170 VENFMKSLQLADVWRRMNPVKQDFTFY---IRDRPV---SRLDYFFIPDECMWRVGSCEI 223

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
                G  K  D  PV + ++
Sbjct: 224 MNSRFGELK--DRQPVSLEIN 242


>gi|147862842|emb|CAN82968.1| hypothetical protein VITISV_021857 [Vitis vinifera]
          Length = 1122

 Score = 69.0 bits (167), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 79/261 (30%), Gaps = 37/261 (14%)

Query: 4   VTVATWNVNSIRA----RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           + + +WNV   RA    +   + A I+    D++CLQETK ++       + SL      
Sbjct: 3   LKILSWNVR--RANDRNKRKVIKALIRSQKVDLVCLQETKIQE--MSQGVIHSLG----V 54

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
                +  V        + +       +L      I   F                    
Sbjct: 55  GRFLGWGAVNARGAAGGVVVFWDKRVLELVGLEVGISCRFKNCEDGF-----MWFFTGVY 109

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
             T    +  + +             +P    GD+N+I  P++               EV
Sbjct: 110 GPTMKRYREPFWEELGAIRG---LWSDPWCIGGDFNVIRFPNERSRVGRLSGSMRRFSEV 166

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
                         A+R        Y++    +   +     R+D  ++S +  +     
Sbjct: 167 LD----------ELALRXLPLQGGPYTW----SGGLNGQSXSRLDRFLISEDWENHFSGV 212

Query: 240 RIDTKPRGWTKPSDHTPVIVS 260
              T PR     SDH+P+++ 
Sbjct: 213 SQCTLPR---PVSDHSPILLD 230


>gi|162452973|ref|YP_001615340.1| endonuclease/exonuclease/phosphatase [Sorangium cellulosum 'So ce
           56']
 gi|161163555|emb|CAN94860.1| Endonuclease/Exonuclease/phosphatase [Sorangium cellulosum 'So ce
           56']
          Length = 343

 Score = 69.0 bits (167), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 42/276 (15%), Positives = 83/276 (30%), Gaps = 39/276 (14%)

Query: 4   VTVATWNVNSIRA----RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           + VA++N    RA    R+      + E  PD++ LQE    +           + H++T
Sbjct: 92  LRVASFNT-GSRAMNIDRLKGF---VAETRPDVLALQECSASEPEL-NAAFPGWSVHVDT 146

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
                     + ++ +    V    G    ++                   L      P 
Sbjct: 147 GMCLVSRHPLLKAESRDRRDVWDKGGHGAILRYEIALPD-----------ALRPSSEEPR 195

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
            +  +      ++         +          D  I  +  +      W ++A + + V
Sbjct: 196 GTRVFSLLNLHLETPREAIEALIHGLWKQEAEHDRVIALRAWESELARQWVDEAPYPVVV 255

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD------SWSKNKGIRIDHIMLSPEAT 233
              F    +              + +S     A         ++  G+RIDH++  P  T
Sbjct: 256 AGDFNMPVDSAIYRRF--WAGFENAFS----RAGLGFGATKRTRWFGVRIDHVLAGPGWT 309

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKK 269
           +    A I     G    SDH P++  L     R++
Sbjct: 310 T--ERAWI-----GPDLGSDHLPIVADLRWSGARRE 338


>gi|298386065|ref|ZP_06995622.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 1_1_14]
 gi|298261293|gb|EFI04160.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 1_1_14]
          Length = 361

 Score = 69.0 bits (167), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 43/271 (15%), Positives = 83/271 (30%), Gaps = 30/271 (11%)

Query: 4   VTVATWNVNSIRARIHN-----LAAWIKENNPDIICLQE---TK----TEDKNFPFETLQ 51
           +   ++NV              + +++ ++  DIICLQE   TK      D++   + L+
Sbjct: 101 IKFLSYNVMGFNNLEKKEGKNPILSYLADSEADIICLQEYNSTKNKKYLTDEDI-RKALK 159

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
           +  Y      ++  + +A  SK+    I++  P          ++ T  +N  T+ + N 
Sbjct: 160 AYPYRSIHNPERGGSQLACFSKFP---ILSARPIKYESTYNGSMQYTLKVNEDTITLINN 216

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
           +L         K   +        +     L      +         Q       I    
Sbjct: 217 HLESNKLTKEDKVIYEDMIKDPNAKKVKTGLRQLIKKLAEASAIRSSQADSVAVAIANSK 276

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG---IRIDHIML 228
                  +                  T      ++         S N      RID+I++
Sbjct: 277 ----YPTIITCGDFNDASISYTHRILTQQLDDAFTQ-SGRGLGISYNLNKFYFRIDNILI 331

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
           SP      ++  +D       K SDH P+  
Sbjct: 332 SPN--QKAYNCTVDRSI----KDSDHYPIWC 356


>gi|29348242|ref|NP_811745.1| hypothetical protein BT_2833 [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|29340145|gb|AAO77939.1| endonuclease/exonuclease/phosphatase-like protein [Bacteroides
           thetaiotaomicron VPI-5482]
          Length = 361

 Score = 69.0 bits (167), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 44/271 (16%), Positives = 83/271 (30%), Gaps = 30/271 (11%)

Query: 4   VTVATWNVNSIRARIHN-----LAAWIKENNPDIICLQE---TK----TEDKNFPFETLQ 51
           +   ++NV              + +++ ++  DIICLQE   TK      D++   + L+
Sbjct: 101 IKFLSYNVMGFNNLEKKEGKNPILSYLADSEADIICLQEYNSTKNKKYLTDEDI-RKALK 159

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
           +  Y      +K  + +A  SK+    I++  P          ++ T  +N  T+ + N 
Sbjct: 160 AYPYRSIHNPEKGGSQLACFSKFP---ILSARPIKYESTYNSSMQYTLKVNEDTITLINN 216

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
           +L         K   +        +     L      +         Q       I    
Sbjct: 217 HLESNKLTKEDKVIYEDMIKDPNAKKVKTGLRQLIKKLAEASAIRSSQADSVAVAIANSK 276

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG---IRIDHIML 228
                  +                  T      ++         S N      RID+I++
Sbjct: 277 ----YPTIIACGDFNDASISYTHRILTQQLDDAFTQ-SGRGLGISYNLNKFYFRIDNILI 331

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
           SP      ++  +D       K SDH P+  
Sbjct: 332 SPN--QKAYNCTVDRSI----KDSDHYPIWC 356


>gi|301163088|emb|CBW22637.1| putative transmembrane endonuclease/exonuclease/phosphatase family
           protein [Bacteroides fragilis 638R]
          Length = 361

 Score = 68.7 bits (166), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 44/274 (16%), Positives = 80/274 (29%), Gaps = 31/274 (11%)

Query: 2   SVVTVATWNVNSIRARI-----HNLAAWIKENNPDIICLQETKTEDKNFPFE----TLQS 52
           + + +AT+NV+S            LAA++KE+  DIIC QE    ++ F  +        
Sbjct: 101 NTLKIATYNVDSFGNEQSGYSCKELAAYMKEHRVDIICFQEF-AGNRYFTSDSIRNAFAD 159

Query: 53  LNYHIETCGQKSYN--GVAILSKYQ----PIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
             Y +      S     VA+ SKY      +          +         T  +    L
Sbjct: 160 WQYAVIPQAPDSTPILQVALFSKYPVKDSRLITYPDSRNCSMWCDLNVDGQTVRVFNNHL 219

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
           +   +             ++     +   +   + L        A    +         P
Sbjct: 220 QTTEVSQNKRRLERELAKNELTGREEAVAKQLLEGLNENFRKRAAQAKTLEQLIRTTPYP 279

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226
           I+   D               +          H   + + ++          + +RID+I
Sbjct: 280 ILVCGDFNSLPSSYTYSTVKGDNLQDGFQTCGHGYMYTFRYF---------KRLLRIDYI 330

Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
             S E         +D         SDH PV++ 
Sbjct: 331 FHSKEFK------GVDYYSPDLDLCSDHNPVVME 358


>gi|260173107|ref|ZP_05759519.1| hypothetical protein BacD2_14655 [Bacteroides sp. D2]
 gi|315921383|ref|ZP_07917623.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313695258|gb|EFS32093.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 361

 Score = 68.7 bits (166), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 39/273 (14%), Positives = 85/273 (31%), Gaps = 34/273 (12%)

Query: 4   VTVATWNVNSI-RARIHN----LAAWIKENNPDIICLQET------KTEDKNFPFETLQS 52
           + + ++NV S       +    + +++  +N DIICLQE       K   +    + L++
Sbjct: 101 IKILSYNVMSFSNLEKKDGKNPILSYLANSNADIICLQEYNTATNKKYLTEQDVKKALKA 160

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
             Y       K    +A  SK+  + I       + +   R++     +N  TL + N +
Sbjct: 161 YPYQSIHQQGKGDVQLACFSKFPILSIHPIEYKSNYNGSMRYVLN---VNNDTLTLINNH 217

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
           L         +   +           +++++     +               + +     
Sbjct: 218 LESNKLTKEDRGIYEDMIK----DPNAKKVKTGLRQLIRKLTEASAIRASQADSVARVIA 273

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYS------FWDYYADSWSKNKGIRIDHI 226
                                    T +    ++         Y  + +      RID+I
Sbjct: 274 ESKYPTTIVCGDFNDGSISYTHRILTQELDDAFTQSGKGLGISYNLNKFY----FRIDNI 329

Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
           ++SP   +   +  +D       K SDH P+  
Sbjct: 330 LISPNLKAY--NCTVDRSI----KASDHYPIWC 356


>gi|253569392|ref|ZP_04846802.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|251841411|gb|EES69492.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
          Length = 361

 Score = 68.7 bits (166), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 44/271 (16%), Positives = 83/271 (30%), Gaps = 30/271 (11%)

Query: 4   VTVATWNVNSIRARIHN-----LAAWIKENNPDIICLQE---TK----TEDKNFPFETLQ 51
           +   ++NV              + +++ ++  DIICLQE   TK      D++   + L+
Sbjct: 101 IKFLSYNVMGFNNLEKKEGKNPILSYLADSEADIICLQEYNSTKNKKYLTDEDI-RKALK 159

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
           +  Y      +K  + +A  SK+    I++  P          ++ T  +N  T+ + N 
Sbjct: 160 AYPYRSIHNPEKGGSQLACFSKFP---ILSARPIKYESTYNGSMQYTLKVNEDTITLINN 216

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
           +L         K   +        +     L      +         Q       I    
Sbjct: 217 HLESNKLTKEDKVIYEDMIKDPNAKKVKTGLRQLIKKLAEASAIRSSQADSVAVAIANSK 276

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG---IRIDHIML 228
                  +                  T      ++         S N      RID+I++
Sbjct: 277 ----YPTIIACGDFNDASISYTHRILTQQLDDAFTQ-SGRGLGISYNLNKFYFRIDNILI 331

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
           SP      ++  +D       K SDH P+  
Sbjct: 332 SPN--QKAYNCTVDRSI----KDSDHYPIWC 356


>gi|221101936|ref|XP_002168483.1| PREDICTED: similar to pol-like protein [Hydra magnipapillata]
          Length = 1161

 Score = 68.7 bits (166), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 50/261 (19%), Positives = 75/261 (28%), Gaps = 37/261 (14%)

Query: 1   MSVVTVATWNVNSI---RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57
           M+V T+ T+NVN +   R R HN+    K  + DI C+QET   ++    +  +  N   
Sbjct: 1   MAV-TILTFNVNGLNDDRKR-HNIMNTFKNMDCDIFCIQETHCVNEK-TEKWTKEWNLKT 57

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
                 +             +I T       D   R I A  T+  + +R  N+Y P+  
Sbjct: 58  GGSALWNNGEARQRGVAILTKIETKFQNVSTDNYGRVIAANITLKNKIIRTINVYGPNDP 117

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
                 +      I +                            +               
Sbjct: 118 QQKENFFGQLGKHIYQSDILFLSGDFNMVENPVLDREGGDVYNKNNTLGKTNFKKFTDKY 177

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSF----WDYYADSWSKNKGIRIDHIMLSPEAT 233
           E              D  RA +     Y+F      Y           RID I +S    
Sbjct: 178 E------------LQDVFRAINPLTKAYTFEKSDKTYRC---------RIDRIYVSKNNE 216

Query: 234 SLLHSARIDTKPRGWTKPSDH 254
             L S  +D       K SDH
Sbjct: 217 LPLKSKMLDP------KLSDH 231


>gi|147819341|emb|CAN77883.1| hypothetical protein VITISV_024433 [Vitis vinifera]
          Length = 839

 Score = 68.7 bits (166), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 30/259 (11%), Positives = 72/259 (27%), Gaps = 32/259 (12%)

Query: 4   VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + +WNV      ++   +  +I+    D+IC+QETK +                    
Sbjct: 3   LKILSWNVRGANDSSKRKVIKTFIRNQRVDLICIQETKIQ-------------------- 42

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
                G+              +  +             +++      G+  L        
Sbjct: 43  -SMSEGIVRSLGSGRFLDWKAMNAEGASGGILICWDRRSLDILEWEEGHFTLSCRFWDVE 101

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
                  + +        +    EE     G +         +N  + + +      +  
Sbjct: 102 NGAVWVFTGVYDPFSKVERDELWEEFGAIRGLWEDPWCLGGDFNITLLQRERSSQRRISS 161

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSAR 240
           + +K   +     +         +++     +    N+   R+D  ++SP          
Sbjct: 162 TMRKFAEIVDDLGLVDLLLQGGEFTW-----NGGHNNQAWARLDRFLVSPSWVDQFSGI- 215

Query: 241 IDTKPRGWTKPSDHTPVIV 259
             T+ R     SDH P+ +
Sbjct: 216 --TQSRLPQPVSDHFPITL 232


>gi|160889855|ref|ZP_02070858.1| hypothetical protein BACUNI_02286 [Bacteroides uniformis ATCC 8492]
 gi|156860847|gb|EDO54278.1| hypothetical protein BACUNI_02286 [Bacteroides uniformis ATCC 8492]
          Length = 361

 Score = 68.7 bits (166), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 44/274 (16%), Positives = 91/274 (33%), Gaps = 31/274 (11%)

Query: 4   VTVATWNVNSIRARI-----HNLAAWIKENNPDIICLQETKTEDKNFPFETLQ---SLNY 55
           + +AT+N+++    I       +A ++++   D++C QE   ++ +FP ++++   S   
Sbjct: 104 LKIATYNIHNFGGEITGYSCKEIARYMQQEGVDVLCFQEF-GDNSDFPTDSIRRVLSHWS 162

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
           H     + S  GV  ++ +    +  H            +     + T T+R+ N +L  
Sbjct: 163 HALIPSEDSVKGVLPIAVFSRYPLANHRFITYQHSSNCSMMCDVVMGTDTIRLINNHLQT 222

Query: 116 GNPITSTKYDDKISWIKRFLRFAS------QRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
            +     +  ++        R           L           Y I         P++ 
Sbjct: 223 TSVSQKRRKWERELATDDTRREVQAAKDAAGTLHENFMKRATQTYVISHYAKTSPYPVLL 282

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
             D                         T    ++Y++           + +RID+I  S
Sbjct: 283 CGDFNSIPSSYTYHHLR---KTLKDGFRTAGNGYMYTY-------RYAKRMLRIDYIFHS 332

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           P          I+         SDH PVI+ ++I
Sbjct: 333 PSLK------GIEYYSPDLDLCSDHNPVIMEVEI 360


>gi|255689971|ref|ZP_05413646.1| AP endonuclease domain protein [Bacteroides finegoldii DSM 17565]
 gi|260624578|gb|EEX47449.1| AP endonuclease domain protein [Bacteroides finegoldii DSM 17565]
          Length = 361

 Score = 68.7 bits (166), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 39/267 (14%), Positives = 79/267 (29%), Gaps = 22/267 (8%)

Query: 4   VTVATWNVNSIRARIHN-----LAAWIKENNPDIICLQET------KTEDKNFPFETLQS 52
           + V ++NV S            + +++K +N DIICLQE       K   +    + L++
Sbjct: 101 IKVLSYNVMSFSNLKKKDGKNPILSYLKNSNADIICLQEYNTASNKKFVTEQDVKKALKA 160

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
             Y      +K    +A  S++  +         D +   +++          +   +L 
Sbjct: 161 YPYQSIRQQRKGDVQLACFSRFPILSSQLIEYKSDYNGSMKYVLNVNNDTITLIN-NHLE 219

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                      Y+D I            R  + +    +                     
Sbjct: 220 SNKLTKEDRGIYEDMIKDPNAKKVKTGLRQLIRKLGEASAIRASQADSVARIITENHYPT 279

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                +         +   T  +              Y  + +      RID+I++SP+ 
Sbjct: 280 MIVCGDFNDGSISYTHRVLTQELDDAFTQSGKGLGISYNQNKFY----FRIDNILISPDL 335

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIV 259
            +   +  +D       K SDH P+  
Sbjct: 336 KAY--NCTVDRSI----KASDHYPIWC 356


>gi|313158737|gb|EFR58124.1| endonuclease/exonuclease/phosphatase family protein [Alistipes sp.
           HGB5]
          Length = 318

 Score = 68.7 bits (166), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 37/276 (13%), Positives = 65/276 (23%), Gaps = 31/276 (11%)

Query: 5   TVATWNV----------NSIR------ARIHNLAAWIKENNPDIICLQETKTEDKNFPFE 48
            V T NV             R      A +      I+   PD+IC+QE   +  N+  E
Sbjct: 52  RVMTCNVRITGLPEDETAGRRWEDCRDACLKA----IRMYRPDVICMQEVIYDSYNYFKE 107

Query: 49  TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108
                  +     +                I  ++               + ++   L  
Sbjct: 108 KFSDYVAYGFAGPEMDPYTEGYH------FIGKNVIFFSKKRYEFVSSGCYWLSETPLAA 161

Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY---N 165
           G+                +        R     L+ +          +I      Y    
Sbjct: 162 GSCSWNTMRARHCNWVRLRDRKSGAEFRVLDIHLDHKSDDARREQMKMIVGECAQYADGF 221

Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225
           P I   D    +E                          +++  +    + K    RID 
Sbjct: 222 PQIICGDFNSGIENAPVACLRDAGWQEAYEAVHGPGEAGFTYHGFKGPDYRKKNARRIDF 281

Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           I +         +A I         PSDH  ++   
Sbjct: 282 IFVRGNLQP--VAAEILRDKVDGLYPSDHYFLMSDF 315


>gi|253565260|ref|ZP_04842715.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|251945539|gb|EES85946.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
          Length = 361

 Score = 68.7 bits (166), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 43/274 (15%), Positives = 80/274 (29%), Gaps = 31/274 (11%)

Query: 2   SVVTVATWNVNSIRARI-----HNLAAWIKENNPDIICLQETKTEDKNFPFE----TLQS 52
           + + +AT+NV+S            LAA++KE+  DIIC QE    ++ F  +        
Sbjct: 101 NTLKIATYNVDSFGNEQSGYSCKELAAYMKEHRVDIICFQEF-AGNRYFTPDSIRNAFAD 159

Query: 53  LNYHIETCGQKSYN--GVAILSKYQ----PIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
             Y +      S     VA+ SKY      +          +         T  +    L
Sbjct: 160 WQYAVIPQAPDSTPILQVALFSKYPVKDSRLITYPDSRNCSMWCDLNVDGQTIRVFNNHL 219

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
           +   +             ++     +   +   + L        A    +         P
Sbjct: 220 QTTEVSQNKRRLERELAKNELTGREEAVAKQLLEGLNENFRKRAAQAKTLEQLIRTTPYP 279

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226
           ++   D               +          H   + + ++          + +RID+I
Sbjct: 280 VLVCGDFNSLPSSYTYSTVKGDNLQDGFQTCGHGYMYTFRYF---------KRLLRIDYI 330

Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
             S E         +D         SDH PV++ 
Sbjct: 331 FHSKEFK------GVDYYSPDLDLCSDHNPVVME 358


>gi|317478865|ref|ZP_07938015.1| endonuclease/Exonuclease/phosphatase [Bacteroides sp. 4_1_36]
 gi|316904947|gb|EFV26751.1| endonuclease/Exonuclease/phosphatase [Bacteroides sp. 4_1_36]
          Length = 361

 Score = 68.7 bits (166), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 44/274 (16%), Positives = 91/274 (33%), Gaps = 31/274 (11%)

Query: 4   VTVATWNVNSIRARI-----HNLAAWIKENNPDIICLQETKTEDKNFPFETLQ---SLNY 55
           + +AT+N+++    I       +A ++++   D++C QE   ++ +FP ++++   S   
Sbjct: 104 LKIATYNIHNFGGEITGYSCKEIARYMQQEGVDVLCFQEF-GDNSDFPTDSIRRVLSHWS 162

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
           H     + S  GV  ++ +    +  H            +     + T T+R+ N +L  
Sbjct: 163 HALIPSEDSVKGVLPIAVFSRYPLANHRFITYQHSSNCSMICDVVMGTDTIRLINNHLQT 222

Query: 116 GNPITSTKYDDKISWIKRFLRFAS------QRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
            +     +  ++        R           L           Y I         P++ 
Sbjct: 223 TSVSQKRRKWERELATDDTRREVQAAKDAAGTLHENFMKRATQTYVISHYAKTSPYPVLL 282

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
             D                         T    ++Y++           + +RID+I  S
Sbjct: 283 CGDFNSIPSSYTYHHLR---KTLKDGFRTAGNGYMYTY-------RYAKRMLRIDYIFHS 332

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           P          I+         SDH PVI+ ++I
Sbjct: 333 PSLK------GIEYYSPDLDLCSDHNPVIMEVEI 360


>gi|188994745|ref|YP_001928997.1| hypothetical protein PGN_0881 [Porphyromonas gingivalis ATCC 33277]
 gi|188594425|dbj|BAG33400.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC
           33277]
          Length = 375

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 46/282 (16%), Positives = 87/282 (30%), Gaps = 42/282 (14%)

Query: 2   SVVTVATWNVNSIRARIHN------LAAWIKENNPDIICLQE-------------TKTED 42
           S + V T+NV     R HN      +  +IK +  DI+CLQE              +T  
Sbjct: 111 SRIKVMTYNVKGFDFRAHNSEDPNPILKYIKGSGADIVCLQEAVLSRKSNSRYVGLRTFK 170

Query: 43  KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN 102
           K  P      L         +  +G+ +LSKY  +++         +    +   T  I 
Sbjct: 171 KYLPEYRYMEL---SHAREDRKGSGLMLLSKYPILDVHRIPYESAFNGSTAY---TVDIQ 224

Query: 103 TQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD 162
            + + + N +L       +   +      +      S+ +  +    +     +      
Sbjct: 225 GRKVLVVNNHLESFRLTMADGTEYLKMVREGEAAALSRMMTAKMGPAY-ALRAVQADSVS 283

Query: 163 CYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG-- 220
            Y             +   +            ++  +               ++ N+G  
Sbjct: 284 HYIRCSESEHVIVCGDFNDTPISYARHKIASGLKDAYSDTG-------RGPGFTFNQGAF 336

Query: 221 -IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
            +RIDHI+ S    +   +  +D         SDH PV   L
Sbjct: 337 KVRIDHILYSSGFLAY--NCTVDKSV----HASDHFPVWCYL 372


>gi|53713283|ref|YP_099275.1| hypothetical protein BF1993 [Bacteroides fragilis YCH46]
 gi|52216148|dbj|BAD48741.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
          Length = 361

 Score = 68.7 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 43/274 (15%), Positives = 80/274 (29%), Gaps = 31/274 (11%)

Query: 2   SVVTVATWNVNSIRARI-----HNLAAWIKENNPDIICLQETKTEDKNFPFE----TLQS 52
           + + +AT+NV+S            +AA++KE+  DIIC QE    ++ F  +        
Sbjct: 101 NTLKIATYNVDSFGNEQSGYSCKEIAAYMKEHRVDIICFQEF-AGNRYFTSDSIRNAFAD 159

Query: 53  LNYHIETCGQKSYN--GVAILSKYQ----PIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
             Y +      S     VA+ SKY      +          +         T  +    L
Sbjct: 160 WQYAVIPQAPDSTPILQVALFSKYPVKDSRLITYPDSRNCSMWCDLDVNGQTVRVFNNHL 219

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
           +   +             ++     +   +   + L        A    +         P
Sbjct: 220 QTTEVSQNKRRLERELAKNELTGREEAVAKQLLEGLNENFRKRAAQAKTLEQLIRTTPYP 279

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226
           I+   D               +          H   + + ++          + +RID+I
Sbjct: 280 ILVCGDFNSLPSSYTYSTVKGDNLQDGFQTCGHGYMYTFRYF---------KRLLRIDYI 330

Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
             S E         +D         SDH PV++ 
Sbjct: 331 FHSKEFK------GVDYYSPDLDLCSDHNPVVME 358


>gi|257126763|ref|YP_003164877.1| endonuclease/exonuclease/phosphatase [Leptotrichia buccalis
           C-1013-b]
 gi|257050702|gb|ACV39886.1| Endonuclease/exonuclease/phosphatase [Leptotrichia buccalis
           C-1013-b]
          Length = 257

 Score = 68.3 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 46/273 (16%), Positives = 88/273 (32%), Gaps = 55/273 (20%)

Query: 5   TVATWNVNSIRARIHN---LAAWIKENNPDIICLQET-----KTEDKNFPFETLQSLNYH 56
            + T+N+    AR+ N   L   IK   PD + LQE      ++  K+   +  + L Y 
Sbjct: 25  KIMTYNIYG--ARLTNGQKLGESIKPYAPDFVSLQEVDKFTKRSNFKDITSDIAKELGYD 82

Query: 57  IETCGQKSYNG-----VAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
                +          ++ +S+Y   +I T+        + + + A     +   ++  +
Sbjct: 83  YYYFQKSRDYDGGEYGISFISRYPLEKIYTYELPSLGVEKRQILIAELAKKSFGKKVLIM 142

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
                         D      + L   ++  + ++    +GD N +P             
Sbjct: 143 NTHL------DFKPDIKPEEMKSLEMITKFFKKDDLKFLSGDLNFLPTTTYYNEITKNWR 196

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
           D                                 ++ +Y  D        RID+I  S  
Sbjct: 197 D---------------------------------TYIEYNPDGKRTLSDPRIDYIFGSQS 223

Query: 232 ATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
               + ++  I+   + WTK SDH P +  LDI
Sbjct: 224 KKWKVKNSYFINDATQDWTKLSDHLPYMTILDI 256


>gi|167644355|ref|YP_001682018.1| endonuclease/exonuclease/phosphatase [Caulobacter sp. K31]
 gi|167346785|gb|ABZ69520.1| Endonuclease/exonuclease/phosphatase [Caulobacter sp. K31]
          Length = 266

 Score = 68.3 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 50/294 (17%), Positives = 81/294 (27%), Gaps = 48/294 (16%)

Query: 4   VTVATWNVNSIR-------ARIHNLAAWIKENNPDIICLQE-------TKTEDKNFPFET 49
           + + T+NV+  R         +  +A  I   NPD++ LQE       TK  D+      
Sbjct: 3   LRLMTYNVH--RCVGTDRKLDVERVAEVIAAENPDVVALQELDVRRARTKGVDQAHRLAE 60

Query: 50  LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
           L  +  H                     E      G  L  +   +E    I       G
Sbjct: 61  LLKMKSHFHPAMAVEEELYGDAILTALPEKKVKADGLPLYTRIPGLEPRGAIWVTVEVGG 120

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
                    +     + K               + + P I  GD+N  P           
Sbjct: 121 VPVQIINTHLGLVPQEQKRQAAALLGEQWMAHEDWKAPGILLGDFNASPYSATYRLLRAA 180

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
             DA       +                        +F   +         +RIDH+ L+
Sbjct: 181 LRDAQTQSPTWKKTPTA-------------------TFPSRFPF-------MRIDHVFLT 214

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE---PRKKQQDSTSQNMKP 280
               ++  S+      R     SDH P++V L+I           D +S +  P
Sbjct: 215 KGLETVNVSSPYGPLAR---VASDHLPLVVDLEISPAGGSEVPSTDGSSGDAVP 265


>gi|804808|gb|AAA66043.1| unknown protein [Rattus norvegicus]
          Length = 336

 Score = 68.3 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 47/251 (18%), Positives = 76/251 (30%), Gaps = 32/251 (12%)

Query: 6   VATWNVNSIRARIH--NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + N+N + + I    L  WI   +P   CLQET   DK+  +  ++    + +  GQK
Sbjct: 12  LISLNINGLNSPIKSHRLTNWIHNEDPAFCCLQETHLRDKDRHYLRVKGWKTNFQANGQK 71

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
              GVAIL   +                 +            + I          I +  
Sbjct: 72  KQAGVAILISNKINF--------------QLKVIKKDKEGHFIFIKGKIHQDELSILNIY 117

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
             +  +           +  +    I  GD+N      D        +D     EV    
Sbjct: 118 APNTRAPTYVKETLLKLKAHIAPHTIIVGDFNTPLSSMDRSWKQKLNSDVDSIREVMSQM 177

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
                   TD  R  +     Y+F+     ++SK     IDHI+      +      I  
Sbjct: 178 ------DLTDIFRTFYPKAKGYTFFSAPHGTFSK-----IDHIIGQKTGLNRYRKIEIIP 226

Query: 244 KPRGWTKPSDH 254
                   SDH
Sbjct: 227 CVL-----SDH 232


>gi|1334115|emb|CAA27363.1| unnamed protein product [Mus musculus]
          Length = 466

 Score = 68.3 bits (165), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 45/251 (17%), Positives = 76/251 (30%), Gaps = 32/251 (12%)

Query: 6   VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + N+N + + I    L  W+ + +P   CLQET   +K+  +  ++      +  G K
Sbjct: 36  LISLNINGLNSPIKRHRLTDWLHKQDPTFCCLQETHLREKDRHYLRVKGWKTIFQANGLK 95

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
              GVAIL   +                              + I    L     I +  
Sbjct: 96  KQAGVAILISDKIDFQPK--------------VIKKDKEGHFILIKGKILQEELSILNIY 141

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
             +  +           +  +    I  GD+N      D         D     EV +  
Sbjct: 142 APNARAATFIRDTLVKLKAYIAPHTIIVGDFNTPLSSKDRSWKQKLNRDTVKLTEVMKQM 201

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
                   TD  R  +     Y+F+     ++SK     IDHI+      +   +  I  
Sbjct: 202 ------DLTDIYRTFYPKTKGYTFFSAPHGTFSK-----IDHIIGHKTGLNRYKNIEIVP 250

Query: 244 KPRGWTKPSDH 254
                   SDH
Sbjct: 251 CIL-----SDH 256


>gi|265763356|ref|ZP_06091924.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|263255964|gb|EEZ27310.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
          Length = 361

 Score = 67.9 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 44/274 (16%), Positives = 80/274 (29%), Gaps = 31/274 (11%)

Query: 2   SVVTVATWNVNSIRARI-----HNLAAWIKENNPDIICLQETKTEDKNFPFE----TLQS 52
           + + +AT+NV+S            +AA++KE+  DIIC QE    ++ F  +        
Sbjct: 101 NTLKIATYNVDSFGNEQSGYSCKEIAAYMKEHRVDIICFQEF-VGNRYFTSDSIRNAFAD 159

Query: 53  LNYHIETCGQKSYN--GVAILSKYQ----PIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
             Y +      S     VA+ SKY      +          +         T  I    L
Sbjct: 160 WQYAVIPQAPDSTPILQVALFSKYPVKDSRLITYPDSRNCSMWCDLNVDGQTVRIFNNHL 219

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
           +   +             D+     +   +   + L        A    +         P
Sbjct: 220 QTTEVSQNKRRLERELAKDELTGREEAVAKQLLEGLNENFRKRAAQAKTLEQLIRTTPYP 279

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226
           ++   D               +          H   + + ++          + +RID+I
Sbjct: 280 VLVCGDFNSLPSSYTYSTVKGDNLQDGFQTCGHGYMYTFRYF---------KRLLRIDYI 330

Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
             S E         +D         SDH PV++ 
Sbjct: 331 FHSKEFK------GVDYYSPDLDLCSDHNPVVME 358


>gi|301618077|ref|XP_002938453.1| PREDICTED: procollagen-lysine,2-oxoglutarate 5-dioxygenase 2-like
           [Xenopus (Silurana) tropicalis]
          Length = 1185

 Score = 67.9 bits (164), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 49/267 (18%), Positives = 87/267 (32%), Gaps = 28/267 (10%)

Query: 6   VATWNVNSIRARIH--NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           V+++NVN +   +    +    K+ N  I+ +QE+  ++   P   L+    HI T    
Sbjct: 14  VSSYNVNGLNEPVKRAQIFNECKKANSKIVMIQESHFKENQTPNINLKHYP-HIYTSSNP 72

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
                 +L+         H+                    + L I          + +  
Sbjct: 73  EKKATGVLTMIHKDIPFKHI------------ATLADKEGRFLIIKCHMGTLICTLANVY 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
             ++                 E  +I  GD N++  P    +            EV++  
Sbjct: 121 VPNQGQAQFIKQFLKILDNFKEGLIIMGGDLNLVLNPVTDSSSGKSNISHKTLREVKKL- 179

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
                M   DA R  +     Y+ +      +S     RID+IM+S     L   A+I  
Sbjct: 180 --FSEMQLIDAWRTQNPVKKDYTHFSKTHMVYS-----RIDYIMVSQNWLHLFTQAKI-- 230

Query: 244 KPRGWTKPSDHTPVIVSLDIPEPRKKQ 270
              G +  SDH+P+     IP+  K  
Sbjct: 231 ---GNSTLSDHSPIFAKFVIPKTTKPD 254


>gi|53715705|ref|YP_101697.1| hypothetical protein BF4425 [Bacteroides fragilis YCH46]
 gi|60683643|ref|YP_213787.1| hypothetical protein BF4223 [Bacteroides fragilis NCTC 9343]
 gi|253566481|ref|ZP_04843934.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|52218570|dbj|BAD51163.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
 gi|60495077|emb|CAH09896.1| conserved hypothetical protein [Bacteroides fragilis NCTC 9343]
 gi|251944653|gb|EES85128.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|301165155|emb|CBW24725.1| conserved hypothetical protein [Bacteroides fragilis 638R]
          Length = 365

 Score = 67.9 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 41/282 (14%), Positives = 82/282 (29%), Gaps = 33/282 (11%)

Query: 2   SVVTVATWNVNSI-RARIHN----LAAWIKENNPDIICLQE--------TKTEDKNFPFE 48
           + + + ++N+ S    +  N    +  +IK +N DI+C+QE            +K    +
Sbjct: 99  NSIKLLSYNIMSFGNMKKENGQNPILNYIKNSNADIVCMQEYAGSETAKIHLSNKEI-RQ 157

Query: 49  TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108
            L+   YH      K+  G  +    +   +   +     +     +          L I
Sbjct: 158 ALKDYPYHNIKQVGKTGAGSQLACYSKFPILSARMLDYRSNYNGSMVYEIKIGKDTVLLI 217

Query: 109 GNLY-----LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
            N             +      D  +   +           E   I +     I Q    
Sbjct: 218 NNHLESNKLTREDKVVYEDMLKDPKAGKVKSGVRQLVNKLAEASAIRSAQARTIAQEIAH 277

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223
                      F         ++ +    DA   +     +     Y  + +      RI
Sbjct: 278 SPYPSVIVCGDFNDSPISYAHRVISQDMDDAFTESGCGLGI----SYNQNKFY----FRI 329

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           D+I++S           +D       K SDH P+   + +P+
Sbjct: 330 DNILVSKNL--KASGCTVDNSI----KDSDHYPIWCYITLPD 365


>gi|149199457|ref|ZP_01876492.1| endonuclease/exonuclease/phosphatase family protein [Lentisphaera
           araneosa HTCC2155]
 gi|149137392|gb|EDM25810.1| endonuclease/exonuclease/phosphatase family protein [Lentisphaera
           araneosa HTCC2155]
          Length = 590

 Score = 67.9 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/265 (13%), Positives = 69/265 (26%), Gaps = 23/265 (8%)

Query: 7   ATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57
            ++N+         NS   R   +   I++  PD++ LQE     +      +Q  NY  
Sbjct: 38  MSFNIRNSYARDKENSWDLRKELVYKVIQDYAPDVLGLQE--ANHEQLGELKIQFPNYRH 95

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
                         +       V  L   D  +     + + +  +   RI         
Sbjct: 96  IGVASDGGTKGQYSAVLYLKSKVRVLDSGDFWISETPEKVSKSWRSAHRRICTWARLQEL 155

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
             +               +   +  E+    +              +N            
Sbjct: 156 KTSKELVVYNTHLDDGSGKAREKGAEMIMKHLHGQKLKDAFIVMGDFNAAEESKAIAQVK 215

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTH---HLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
               +F         D  R  +        Y  +        K+ G +ID+I +     +
Sbjct: 216 -GTGAFVNAVYPKAVDPFRVLNPEAKNVGTYHGFS------GKDSGAKIDYIFVPKN--A 266

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIV 259
            + +A I         PSDH PV  
Sbjct: 267 QVLAAEILKTNHNGRYPSDHFPVTA 291


>gi|153005530|ref|YP_001379855.1| endonuclease/exonuclease/phosphatase [Anaeromyxobacter sp. Fw109-5]
 gi|152029103|gb|ABS26871.1| Endonuclease/exonuclease/phosphatase [Anaeromyxobacter sp. Fw109-5]
          Length = 260

 Score = 67.9 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/274 (13%), Positives = 77/274 (28%), Gaps = 36/274 (13%)

Query: 4   VTVATWNVNSIR---ARIH--NLAAWIKENNPDIICLQETKTE-DKNFPFETLQSLNYHI 57
           + + +WNV+S+R    R     +A  I +  PDI  LQE   E   + P +  ++L    
Sbjct: 1   MRILSWNVHSLRGTDGRRDPERIARVIADLRPDIAGLQEVGGELAADGPRDVAEAL---- 56

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
                 +                                   ++  +  R          
Sbjct: 57  ---ASLTGMRSTFGPTMSFRGHPYGNGILTRHPIEATRTYDLSVRGREPRGCLRADVEVG 113

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
            +    +   +    R  R  + +L          D  +        +     N +    
Sbjct: 114 GVRVHFFSAHLGLHWRERRKQAAQL---LSADILRDTALAHPLVLVGDFNSLSNRSAVPR 170

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
            +R+      +    +A           +F   +         +R+D + +       + 
Sbjct: 171 WLRRQLVDCAHAARNEAP----------TFPSRFPL-------LRLDRVFVDSAF--RVV 211

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271
              +   P    + SDH P++V L+  E  ++  
Sbjct: 212 GCEVVHTPLAR-RASDHLPLVVDLEPAESARRPP 244


>gi|260170322|ref|ZP_05756734.1| hypothetical protein BacD2_00508 [Bacteroides sp. D2]
 gi|315918686|ref|ZP_07914926.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313692561|gb|EFS29396.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 292

 Score = 67.9 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/266 (13%), Positives = 76/266 (28%), Gaps = 22/266 (8%)

Query: 3   VVTVATWNVN-----SIRA---RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           ++ +A++N+        +A   R++ L   ++ N  D+  +QE +T         L   +
Sbjct: 37  IIRLASYNIRTKGDKGDKAWEVRLNALVDVVRRNKFDMFAIQEGRTSQLK-DMMILNEFS 95

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           Y        +      +   +    V                  +    + +     +  
Sbjct: 96  YIGRDRDGDNKGEHCAIFYKKDRFKVLKHGDFWYSETPDIPSYGWGARCRRICTWGYFKD 155

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
                    ++          R  S  + LE+    A                       
Sbjct: 156 LRTGKKFYVFNSHTDHEATEARRQSSFMLLEQVRKIAKG------KPTFCTGDFNATPDE 209

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             +++      L +            +   Y++        ++N   RID I ++P+   
Sbjct: 210 EPIQLLLKDSLLLDSYECTLTPPKGPSGSFYAY------DKTRNIAKRIDFIFVTPKIK- 262

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVS 260
           +L    ID   +     SDH PV+V 
Sbjct: 263 VLSYHTIDDDIKYNKYSSDHFPVMVE 288


>gi|308504898|ref|XP_003114632.1| hypothetical protein CRE_28560 [Caenorhabditis remanei]
 gi|308258814|gb|EFP02767.1| hypothetical protein CRE_28560 [Caenorhabditis remanei]
          Length = 351

 Score = 67.9 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 45/272 (16%), Positives = 78/272 (28%), Gaps = 49/272 (18%)

Query: 6   VATWNVNSI--RA---RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           V +WN++ +  R+   R+  +A  +K  NPDI+ LQE   +    P + LQSL Y I   
Sbjct: 110 VMSWNIDGLDGRSLATRMKAVAQIVKSVNPDILFLQEV-VDRDLGPIDKLQSL-YKIYYS 167

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +      AIL       +  H      +            +   +++  L     +   
Sbjct: 168 NRGCQYYTAILVSKMFE-VEKHDVIHFQNSGMYRTLQIVEGSIGGIKVFLLNTHLESTRE 226

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
                                      L F GD N+  +                     
Sbjct: 227 HRGQRCAQFSFCMDKCEEILAQNPGCFLFFGGDLNLRDEEVS------------------ 268

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK--NKGIRIDHIMLSPEA------ 232
               ++ N      + A  DT   +++  Y  D+     N  +R D +            
Sbjct: 269 ----RIPNGILDAWVSAGSDTKTKFTWDTYRNDNKQGFYNAKMRFDRLYWHGPLNKVQFS 324

Query: 233 ---TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
                 + S            PSDH  +  + 
Sbjct: 325 LEGRQRIRSC--------LCFPSDHWAISATF 348


>gi|119713777|gb|ABL97825.1| hypothetical protein ALOHA_HF1049E08.0013 [uncultured marine
           bacterium HF10_49E08]
          Length = 255

 Score = 67.9 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 75/248 (30%), Gaps = 19/248 (7%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQP 76
           R   +   I+   PD++ LQE     + +  E L +  Y+  +   +   G      Y+ 
Sbjct: 20  RKELVLKTIQNFGPDLLGLQEVWHMQEEYLKEQLSNYAYYGRSRRMEPVEGEQCAVMYRK 79

Query: 77  IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL---YLPHGNPITSTKYDDKISWIKR 133
                         +   +  + + ++   RI N         N       +       R
Sbjct: 80  DRFEIVKGETFWLSETPEVIESKSWDSSLPRIANWILLKDKKNNKQEIFLINTHFDHKGR 139

Query: 134 FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTD 193
             R  + RL  +      G+  +I             N    +              +  
Sbjct: 140 ESRKQAARLLKKRIQELKGNVRVI--------VTGDFNAREDSDPYLGLVDGKILDTYRM 191

Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253
           A ++  +     S W+          G RID ++ +      + SA ID    G   PSD
Sbjct: 192 AHKSRTEEESTLSGWNGRT------SGNRIDWVLCTRNF--RVLSANIDRSEFGGRYPSD 243

Query: 254 HTPVIVSL 261
           H PV  +L
Sbjct: 244 HYPVTATL 251


>gi|329964252|ref|ZP_08301353.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           fluxus YIT 12057]
 gi|328525557|gb|EGF52600.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           fluxus YIT 12057]
          Length = 369

 Score = 67.9 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 41/270 (15%), Positives = 81/270 (30%), Gaps = 27/270 (10%)

Query: 5   TVATWNVNSI--RARIHN---LAAWIKENNPDIICLQE-------TKTEDKNFPFETLQS 52
            + ++N+       R      +  ++KE+  DI+CLQE            K+   E L++
Sbjct: 103 KLLSYNIMGFDGATRKDGKNPILTYLKESGADILCLQEYATGGSSHHLSQKDVNLE-LKA 161

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
             YH      +       ++ Y    I++    +        +     I   TL + N +
Sbjct: 162 YPYHRIHTVGRGKGHTNRIACYSKFPILSARILNYPSEYNGSVIYEVKIGGDTLTLINNH 221

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
           L       + K   +            ++++    L+               + I  E  
Sbjct: 222 LESNKLTKADKVVYEDMLK----SPEKEKVKSGVRLLIRKLAEASAIRAPQADTIAHEIA 277

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG---IRIDHIMLS 229
           A     +                  +   +  ++         S N+     RID+I+ S
Sbjct: 278 ASRHPYIIVCGDFNDTPISYAHHTISRQLNDAFTQ-SGRGLGISYNQNKFYFRIDNILTS 336

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
                  H+  +D       K SDH P+  
Sbjct: 337 RNL--RTHNCTVDRSI----KDSDHYPIWC 360


>gi|302843683|ref|XP_002953383.1| hypothetical protein VOLCADRAFT_118317 [Volvox carteri f.
          nagariensis]
 gi|300261480|gb|EFJ45693.1| hypothetical protein VOLCADRAFT_118317 [Volvox carteri f.
          nagariensis]
          Length = 705

 Score = 67.5 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 4/76 (5%)

Query: 4  VTVATWNVNSIR---ARIHNLAAWIKENNP-DIICLQETKTEDKNFPFETLQSLNYHIET 59
          + V TWN+N +R   A    L   ++   P D++C QETK    +   E   +  +    
Sbjct: 3  LRVLTWNINGLRRVVAVFGGLQRLLEALAPADVVCFQETKLTRVDLQRELALADGWESFF 62

Query: 60 CGQKSYNGVAILSKYQ 75
             +   G + ++ + 
Sbjct: 63 AFTRGKVGYSGVATFC 78



 Score = 56.7 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/117 (17%), Positives = 34/117 (29%), Gaps = 52/117 (44%)

Query: 197 ATHDTHHLYSFWDYYADSWSKNKGIRIDHIML---------------------------- 228
                 H Y+ W+  + +   N G RIDH+++                            
Sbjct: 308 FHPKRQHAYTCWNTSSGARVNNYGSRIDHVLVADGTRSYSTGCGGFPSDAAGAYGAVTDS 367

Query: 229 -------------SPE-------ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
                        SP            +  A I  + +G    SDH P  V L++P+
Sbjct: 368 THVAVDVAALPAGSPRTGPPGVLCPPWVVMADIIPEFQG----SDHAPAWVELELPD 420


>gi|255008849|ref|ZP_05280975.1| putative transmembrane endonuclease/exonuclease/phosphatase family
           protein [Bacteroides fragilis 3_1_12]
 gi|313146594|ref|ZP_07808787.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313135361|gb|EFR52721.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 361

 Score = 67.5 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 79/274 (28%), Gaps = 31/274 (11%)

Query: 2   SVVTVATWNVNSIRARI-----HNLAAWIKENNPDIICLQETKTEDKNFPFE----TLQS 52
             + +AT+NV+S            +A +++E+  DI+CLQE    ++ F  +    T  +
Sbjct: 101 RTLKIATYNVDSFGNEQSGYSCKEIAKYMEEHQVDIVCLQEF-AANRYFTADSIRNTFAN 159

Query: 53  LNYHIETCGQKSYNGVAIL------SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
             Y I      S + + I        K   +          +         T  +    L
Sbjct: 160 WQYVIIPQAPDSISILQIALFSKYPVKDSKLITYPDSRNCSMWCDLDVDGQTVRVFNNHL 219

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
           +   +             ++     +   R   + L        A    +         P
Sbjct: 220 QTTEVSQNKRRLERELAKNELTGREEAVARQLLEGLNENFRKRAAQAKTLEQLIRTTPYP 279

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226
           I+   D               +          H   + + ++          + +RID+I
Sbjct: 280 ILVCGDFNSLPSSYTYSTVKGDNLQDGFQTCGHGYMYTFRYF---------KRLLRIDYI 330

Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
             S E         +D         SDH PV++ 
Sbjct: 331 FHSKEFK------GVDYYSPDLDLCSDHNPVVME 358


>gi|60681531|ref|YP_211675.1| putative transmembrane endonuclease/exonuclease/phosphatase family
           protein [Bacteroides fragilis NCTC 9343]
 gi|60492965|emb|CAH07743.1| putative transmembrane endonuclease/exonuclease/phosphatase family
           protein [Bacteroides fragilis NCTC 9343]
          Length = 361

 Score = 67.5 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 44/274 (16%), Positives = 80/274 (29%), Gaps = 31/274 (11%)

Query: 2   SVVTVATWNVNSIRARI-----HNLAAWIKENNPDIICLQETKTEDKNFPFE----TLQS 52
           + + +AT+NV+S            +AA++KE+  DIIC QE    ++ F  +        
Sbjct: 101 NTLKIATYNVDSFGNEQSGYSCKEIAAYMKEHRVDIICFQEF-AGNRYFTPDSIRNAFAD 159

Query: 53  LNYHIETCGQKSYN--GVAILSKYQ----PIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
             Y +      S     VA+ SKY      +          +         T  +    L
Sbjct: 160 WQYAVIPQAPDSTPILQVALFSKYPVKDSRLITYPDSRNCSMWCDLDVNGQTVRVFNNHL 219

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
           +   +             ++     +   R   + L        A    +         P
Sbjct: 220 QTTEVSQNKRRLERELAKNELTGREEAVARQLLEGLNENFRKRAAQAKTLEQLIRTTPYP 279

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226
           I+   D               +          H   + + ++          + +RID+I
Sbjct: 280 ILVCGDFNSLPSSYTYSTVKGDNLQDGFQTCGHGYMYTFRYF---------KRLLRIDYI 330

Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
             S E         +D         SDH PV++ 
Sbjct: 331 FHSKEFK------GVDYYSPDLNLCSDHNPVVME 358


>gi|270294111|ref|ZP_06200313.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|270275578|gb|EFA21438.1| conserved hypothetical protein [Bacteroides sp. D20]
          Length = 361

 Score = 67.5 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 44/274 (16%), Positives = 90/274 (32%), Gaps = 31/274 (11%)

Query: 4   VTVATWNVNSIRARI-----HNLAAWIKENNPDIICLQETKTEDKNFPFETLQ---SLNY 55
           + +AT+N+++    I       +A ++++   D++C QE   ++ +FP ++++   S   
Sbjct: 104 LKIATYNIHNFGGEITGYSCKEIARYMQQEGVDVLCFQEF-GDNSDFPTDSIRRVLSHWS 162

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
           H     + S  GV  ++ +    +  H            +     + T T+R+ N +L  
Sbjct: 163 HALIPSEDSVKGVLPIAVFSRYPLANHRFITYQQSSNCSMMCDVAMGTDTIRLINNHLQT 222

Query: 116 GNPITSTKYDDKISWIKRFLRFAS------QRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
            +     +  ++        R           L           Y I         P++ 
Sbjct: 223 TSVSQKRRKWERELATDDTRREVQAAKDAAGTLHENFMKRATQTYVISHYAKTSPYPVLL 282

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
             D                         T    ++Y++           + +RID+I  S
Sbjct: 283 CGDFNSIPSSYTYHHLR---KTLKDGFRTAGNGYMYTY-------RYAKRMLRIDYIFHS 332

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           P          I          SDH PVI+ ++I
Sbjct: 333 PSLK------GIAYYSPDLDLCSDHNPVIMEVEI 360


>gi|149637342|ref|XP_001510545.1| PREDICTED: similar to APEX nuclease (apurinic/apyrimidinic
           endonuclease) 2 [Ornithorhynchus anatinus]
          Length = 549

 Score = 67.5 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 40/143 (27%), Gaps = 11/143 (7%)

Query: 145 EEPLIFAGDYNIIPQPHDCYNPIIW-----ENDACFTLEVRQSFQKLQNMGFTDAIRATH 199
             P+      +      +     +         A    EV           F D+ R  H
Sbjct: 211 HRPIDHCDPSDPEHFDENPGRRWLNEFLWEPGKAPGKGEVADPPPGGGGGAFVDSFRYFH 270

Query: 200 DTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEA-TSLLHSARIDTKPRGWTKPSDHTPV 257
            T  + ++ W     +   N G RID+I+      T     + +  +  G    SDH PV
Sbjct: 271 PTQTNAFTCWSVPQGARHTNYGTRIDYILGDRILVTEEFEDSVLLPEVEG----SDHCPV 326

Query: 258 IVSLDIPEPRKKQQDSTSQNMKP 280
              L        +         P
Sbjct: 327 RAVLKSTLMAAPKCPPFCTKYLP 349


>gi|328719125|ref|XP_001944002.2| PREDICTED: putative neutral sphingomyelinase-like [Acyrthosiphon
           pisum]
          Length = 380

 Score = 67.5 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 42/294 (14%), Positives = 89/294 (30%), Gaps = 31/294 (10%)

Query: 4   VT--VATWNVNSIR-------ARIHNLAAWIKENNPDIICLQETKTEDK--NFPFETLQS 52
           +   + T N+  ++       AR+  LA  +  N  D++CLQE   ED   +        
Sbjct: 1   MKLSIFTLNIWGLKLTSKDRNARVRALADSLTNNGYDVVCLQELWCEDDYKHLKASCDNV 60

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
             Y          +G+ I+S+Y  I+ + H    +  +   +    F      L      
Sbjct: 61  FKYIHYFHSGMLGSGMCIMSRYPIIDHLYHSFILNGYLHMFWHGDWFGGKGIGL------ 114

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                 +     D   + +      ++ +      +      N+I       +  +   D
Sbjct: 115 --CRINVEGFIVDVYTTHLHACYNASNDKYTNHRIIQAFETANLIRVTSSGSDLAVLAGD 172

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF----WDYYADSWSKNKGIRIDHIML 228
                               D+  +  +    Y++      Y   +   +   RID+I+ 
Sbjct: 173 LNSNPNDICYKLICLGANMIDSYSSCLNNSIEYTYSHPENSYKDANEIND---RIDYILY 229

Query: 229 SPEATSLL-----HSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQN 277
                +L+       +     P      SDH P+    +I       + + ++N
Sbjct: 230 KSNEKNLVVVKEHRHSLPHRVPGQDFSYSDHEPIEAVFEISRNTLSIERNITKN 283


>gi|307752095|gb|ADN93066.1| putative DNA lyase [Arthroderma benhamiae]
          Length = 588

 Score = 67.5 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 27/85 (31%), Gaps = 17/85 (20%)

Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK--------- 244
                     +Y+ W+   ++   N G RID+I+ S    S    + I            
Sbjct: 223 CREFHPSRTGMYTCWNQKVNARPGNYGSRIDYILCSDNIRSWFVESNIQEGLIVCVKLEL 282

Query: 245 --------PRGWTKPSDHTPVIVSL 261
                        + SDH PV  S+
Sbjct: 283 TYRSFKNLLISNEQGSDHCPVYASI 307


>gi|302505072|ref|XP_003014757.1| DNA lyase Apn2 [Arthroderma benhamiae CBS 112371]
 gi|291178063|gb|EFE33854.1| DNA lyase Apn2 [Arthroderma benhamiae CBS 112371]
          Length = 601

 Score = 67.5 bits (163), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 27/85 (31%), Gaps = 17/85 (20%)

Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK--------- 244
                     +Y+ W+   ++   N G RID+I+ S    S    + I            
Sbjct: 223 CREFHPSRTGMYTCWNQKVNARPGNYGSRIDYILCSDNIRSWFVESNIQEGLIVCVKLEL 282

Query: 245 --------PRGWTKPSDHTPVIVSL 261
                        + SDH PV  S+
Sbjct: 283 IYRSFKNLLISNEQGSDHCPVYASI 307


>gi|23098760|ref|NP_692226.1| hypothetical protein OB1305 [Oceanobacillus iheyensis HTE831]
 gi|22776987|dbj|BAC13261.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
          Length = 373

 Score = 67.1 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 43/278 (15%), Positives = 79/278 (28%), Gaps = 51/278 (18%)

Query: 4   VTVATWNVNSIRAR---------IHNLAAWIKENNPDIICLQETKTE---DKNFPFETLQ 51
           + V T+NV    A          I  LA  I + + DII LQE         NF     +
Sbjct: 36  LKVGTFNV----AAGTGLDGEYNIDRLADTISDLDVDIIGLQEVDVHWGYRSNFDHMMEE 91

Query: 52  -----SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
                 + Y+       +       ++   + +++  P  D + +     +T   N    
Sbjct: 92  LASRLDMEYYFAPIYDLAPVNEGDPNRQYGVGVLSKYPIVDAENRKITRLSTQVPNPFPT 151

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
           R         N   +           R      +    +   I +             N 
Sbjct: 152 REPGFLQAKINVEGAEVMFYVTHLDYRGDPTIREMQVADMQEIMSEG-----------NY 200

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDH 225
            I   D        +     ++      +             D   +++   N   RID+
Sbjct: 201 NILVGDMNARPNATEIGPLFRDFVDVWGVH------------DTDGNTFPAHNPDRRIDY 248

Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           I+ S      + +A +  +       SDH PV   ++I
Sbjct: 249 ILASKRME--VKTAEVKNEVES----SDHLPVTAEIEI 280


>gi|308803490|ref|XP_003079058.1| APEX nuclease (ISS) [Ostreococcus tauri]
 gi|116057512|emb|CAL51939.1| APEX nuclease (ISS) [Ostreococcus tauri]
          Length = 524

 Score = 67.1 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/302 (11%), Positives = 74/302 (24%), Gaps = 61/302 (20%)

Query: 6   VATWNVNSIR----------ARIHNLAA-----------WIKENNPDI--ICLQETKTED 42
           +A+WNV  +R          +R   + A            ++    D+   C+QETK   
Sbjct: 44  IASWNV-GLRGWRAMTDASRSRARAVDAHGQTRSVPRRGTLRALGADVRVACVQETKMSR 102

Query: 43  KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLP------------------ 84
            +F     +  ++        + +  +  S                              
Sbjct: 103 LDFERRG-READWDCAHSACDARDKRSGYSGVAIYWRSRETCPVAIEEGVCGTRTKAESA 161

Query: 85  GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY----------------DDKI 128
               +      E              ++   G  +    Y                D K 
Sbjct: 162 IWPNERPPLVDEDYARAKALDDEGRAIWADFGEFVLCNLYAPTTYGAVDEKVAERIDFKR 221

Query: 129 SWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN 188
            +++      +        +I  GD+NI P                         + L  
Sbjct: 222 DFLRALEERLTSLRSRGRRVIMCGDWNIAPNWKLDRAHDDPRAVEPKNESREWLTRVLGQ 281

Query: 189 MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGW 248
            G  D  R  H     ++ W+  + +   + G RID+ +   +    +            
Sbjct: 282 DGMCDVFREVHPNVKAFTCWNVASGAQINDYGSRIDYFLCDRDTLGHVQGVG--DDAMWR 339

Query: 249 TK 250
            +
Sbjct: 340 ER 341


>gi|325845459|ref|ZP_08168750.1| putative exodeoxyribonuclease III [Turicibacter sp. HGF1]
 gi|325488478|gb|EGC90896.1| putative exodeoxyribonuclease III [Turicibacter sp. HGF1]
          Length = 45

 Score = 67.1 bits (162), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 19/47 (40%), Positives = 22/47 (46%), Gaps = 4/47 (8%)

Query: 216 SKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
            KN G RID+ + S    S L  ARI     G    SDH PV + L 
Sbjct: 2   QKNVGWRIDYFITSKALESRLEDARIYPDVLG----SDHCPVGLQLK 44


>gi|148236271|ref|NP_001085982.1| MGC82982 protein [Xenopus laevis]
 gi|49115913|gb|AAH73645.1| MGC82982 protein [Xenopus laevis]
          Length = 441

 Score = 67.1 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 52/269 (19%), Positives = 84/269 (31%), Gaps = 28/269 (10%)

Query: 4   VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + T N N + +  +   L   IK     I  +QET  +  + P               
Sbjct: 9   LNIYTINANVLNSPWKRKALLQEIKAKKIHIALIQETHYKTDHIPK-------------W 55

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
              +    I S  QP ++          ++          +     +            S
Sbjct: 56  YDKHFSNIIHSTPQPTKVRGTAILIANSLEFELDRIKNDTHGNYSFVKGKIHSEKQTFAS 115

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
               +                  E  LI  GD N    P    +       +    +++Q
Sbjct: 116 IYLPNAEQNKVMEQICTQLLAFAEGTLILGGDLNTPLDPKIDCSSGT---ASITYKKIKQ 172

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
              +LQ +   D+ R  H T   Y+ + +       N   RID+I LS +    L  A I
Sbjct: 173 IKLQLQLLQVMDSWRIHHPTGRDYTHFSHSH-----NTHNRIDYIFLSHDTLDNLRDATI 227

Query: 242 DTKPRGWTKPSDHTPVIVSLDIPEPRKKQ 270
           +      T  SDH+ VI+ L  P  R KQ
Sbjct: 228 E-----ATTWSDHSLVILRLHTPLTRPKQ 251


>gi|294566523|gb|ADF18552.1| endonuclease-reverse transcriptase [Bombyx mori]
          Length = 977

 Score = 67.1 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 47/290 (16%), Positives = 96/290 (33%), Gaps = 27/290 (9%)

Query: 2   SVVTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDK--NFPFETLQSLNYHI 57
             + + TWNV S++   ++ N+   IK  + DI+ + +TK  D+  NF  +       ++
Sbjct: 28  KTLRIGTWNVRSLKQDGKLPNVIKEIKRLHVDILGISDTKWPDQGTNFVSDD------YV 81

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
                               + ++    + + +  R +  T       + I  +Y P G+
Sbjct: 82  LYYSGGDQRLERYGVGILLTKEISKSVINFVPLSNRAMLITLEAKPFNINIVQVYAPTGD 141

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
                  D   +         +  L +    + A   + I         +   ND   TL
Sbjct: 142 KPVGQIEDLYRAIDTLLKSTKNHELVIVMGDMNAKVGSTITPGVTGAYGLGNRNDRGDTL 201

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYA--DSWSKNKGIRIDHIMLSPEATSL 235
                     N               LY++       D   +N+   ID++M++    + 
Sbjct: 202 IE----FCQDNNLIIANTFFKLPPRRLYTWTSPMHTVDRVVRNQ---IDYVMINRRYRNC 254

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL-----DIPEPRKKQQDSTSQNMKP 280
           +  A+      G    SDH PV+V +      +   R   + +  +  +P
Sbjct: 255 IKKAQTYP---GADIGSDHNPVVVDVACKLKKLQPKRMDGRPNVRKLAEP 301


>gi|302143617|emb|CBI22370.3| unnamed protein product [Vitis vinifera]
          Length = 2099

 Score = 67.1 bits (162), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 39/262 (14%), Positives = 82/262 (31%), Gaps = 31/262 (11%)

Query: 1   MSVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           M+ + + +WNV           + + I++   D+ C+QETK +        ++SL     
Sbjct: 1   MN-LKMLSWNVRGANDVNKRRIIKSVIRKQKVDLFCIQETKIQ--LMTDRMVKSLGVGRF 57

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
              +      A        +  +    +  + Q        T+    + +          
Sbjct: 58  LDWRTIEAAGAAGGILICWDKRSLELLEWEEGQFSISCKFRTVENGAIWVFTGVYGPFTK 117

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
                          +  F + R    EP    GD+N+I    +             +  
Sbjct: 118 EDRECL---------WEEFGAIRGLWGEPWCVGGDFNVILSQGER------SRQGRISPA 162

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           +R+  Q + ++   D           +++    +  +      R+D  M+SP       +
Sbjct: 163 MRRFAQVMNDLELVDLPL----QGGTFTW----SGGFQNQAWARLDRFMVSPSWLDQFRN 214

Query: 239 ARIDTKPRGWTKPSDHTPVIVS 260
               T+ R     SDH P+I+ 
Sbjct: 215 V---TQKRLSRPISDHFPIIIE 233


>gi|253700139|ref|YP_003021328.1| endonuclease/exonuclease/phosphatase [Geobacter sp. M21]
 gi|251774989|gb|ACT17570.1| Endonuclease/exonuclease/phosphatase [Geobacter sp. M21]
          Length = 246

 Score = 66.7 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 51/289 (17%), Positives = 83/289 (28%), Gaps = 68/289 (23%)

Query: 1   MS-VVTVATWNVNS----------IRARIHNLAAWIKENNPDIICLQETKTEDKNFPF-E 48
           MS   +V T+NV+S          +R     +A  I   NPDI+ LQE    D   P  E
Sbjct: 1   MSRTFSVMTYNVHSCIGTDRQLSPLR-----IAEVIDRCNPDIVALQEL---DAGLPRTE 52

Query: 49  TLQSLN---------YHIETCGQKSY----NGVAILSKYQPIEIVTHLPGDDLDVQARFI 95
            +   +         +H  +          N +   S  Q I+              R  
Sbjct: 53  MIDQAHLIAMTLEMSFHFHSSIHLKEGGYGNAILSRSPVQLIKAGAVPTEPLHPSFERRG 112

Query: 96  EATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYN 155
                +    ++I  L    G        +                 E   P I  GD+N
Sbjct: 113 AVWAEVELHGVKIQVLATHFGLNRG----ERVCQARAVTSHEWLGHPECLPPAILCGDFN 168

Query: 156 IIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW 215
            +             +D    +                  R T      +          
Sbjct: 169 ALFGSSVYRLLTRHLHDVQRKV-------------KGRLPRGTWPAQLPF---------- 205

Query: 216 SKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
                +RIDH+ ++      + S  +   P      SDH P++V+L++P
Sbjct: 206 -----MRIDHLFVTHNL--KVRSVSVPRTPLTRV-ASDHLPLVVTLELP 246


>gi|60392921|sp|P11369|POL2_MOUSE RecName: Full=Retrovirus-related Pol polyprotein LINE-1; AltName:
           Full=Long interspersed element-1; Short=L1; Includes:
           RecName: Full=Reverse transcriptase; Includes: RecName:
           Full=Endonuclease
 gi|804788|gb|AAA66024.1| 2855 is the position of the first start codon in ORF 2; putative
           [Mus musculus]
          Length = 1281

 Score = 66.7 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 45/251 (17%), Positives = 76/251 (30%), Gaps = 32/251 (12%)

Query: 6   VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + N+N + + I    L  W+ + +P   CLQET   +K+  +  ++      +  G K
Sbjct: 17  LISLNINGLNSPIKRHRLTDWLHKQDPTFCCLQETHLREKDRHYLRVKGWKTIFQANGLK 76

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
              GVAIL   +                              + I    L     I +  
Sbjct: 77  KQAGVAILISDKIDFQPK--------------VIKKDKEGHFILIKGKILQEELSILNIY 122

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
             +  +           +  +    I  GD+N      D         D     EV +  
Sbjct: 123 APNARAATFIRDTLVKLKAYIAPHTIIVGDFNTPLSSKDRSWKQKLNRDTVKLTEVMKQM 182

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
                   TD  R  +     Y+F+     ++SK     IDHI+      +   +  I  
Sbjct: 183 ------DLTDIYRTFYPKTKGYTFFSAPHGTFSK-----IDHIIGHKTGLNRYKNIEIVP 231

Query: 244 KPRGWTKPSDH 254
                   SDH
Sbjct: 232 CIL-----SDH 237


>gi|197119100|ref|YP_002139527.1| metal-dependent hydrolase [Geobacter bemidjiensis Bem]
 gi|197088460|gb|ACH39731.1| metal-dependent hydrolase [Geobacter bemidjiensis Bem]
          Length = 246

 Score = 66.7 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 46/289 (15%), Positives = 77/289 (26%), Gaps = 68/289 (23%)

Query: 1   MS-VVTVATWNVNS----------IRARIHNLAAWIKENNPDIICLQETKTEDKNFPF-E 48
           MS   +V T+NV+S          +R     +A  I   NPDI+ LQE    D   P  E
Sbjct: 1   MSRTFSVMTYNVHSCIGTDRQLSPLR-----IAEVIDRCNPDIVALQEL---DAGLPRTE 52

Query: 49  TLQSLN---------YHIETCGQKSY----NGVAILSKYQPIEIVTHLPGDDLDVQARFI 95
            +   +         +H  +          N +   S  Q I+              R  
Sbjct: 53  MIDQAHLIAMTLEMSFHFHSSIHLKEGGYGNAILSRSPVQLIKAGAVPTDPLHPSFERRG 112

Query: 96  EATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYN 155
                +    ++I  L    G          +      +L              F   + 
Sbjct: 113 ALWAEVELHGVKIQVLATHFGLNRGERVRQARAVTGPEWLGHPECLPPAVLCGDFNALFG 172

Query: 156 IIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW 215
                         +      L       +L                             
Sbjct: 173 SSVYRLLTRQLHDVQRKVKGRLPRGTWPAQLPF--------------------------- 205

Query: 216 SKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
                +RIDH+ ++      + S  +   P      SDH P++V+L++P
Sbjct: 206 -----MRIDHLFVTHNL--KVRSVSVPRNPLTRV-ASDHLPLVVTLELP 246


>gi|313157364|gb|EFR56787.1| endonuclease/exonuclease/phosphatase family protein [Alistipes sp.
           HGB5]
          Length = 383

 Score = 66.7 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 39/268 (14%), Positives = 71/268 (26%), Gaps = 27/268 (10%)

Query: 5   TVATWNV------NSIRARIHNLAAWIKENNPDIICLQETKTE-DKNFPFETLQSLNYHI 57
            V T+NV      N + + + ++   I ++NPDIICLQE             L    Y  
Sbjct: 125 KVMTYNVRGFYGENGL-SSVGDVLQLIGDHNPDIICLQEFNARLAGQSDEFALLDEKYES 183

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
              G+         +    +     L    +      + A   I   T+R+ N +L    
Sbjct: 184 AVFGRTQAPDSLYGAPLVILSKYRILRSGVVLTPGTSVWADLLIGDDTIRVFNNHLRSTA 243

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
              +                  +   +                        W +      
Sbjct: 244 IKAADNDYLTSRGFLSDTAREDKLRSMAGRFRENSVLRAAQVDSIAVVVEAWRSRCIVCG 303

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
           +   +            +          S + +    +     +RID+++ S        
Sbjct: 304 DFNDTPMSYVYRTMAKGLNDAFSQCG--SGYSHTFRGFFNT--LRIDYVLSSEGF----- 354

Query: 238 SARIDTKPRGWTKP----SDHTPVIVSL 261
                     +  P    SDH PV+V L
Sbjct: 355 ------DALSYEVPTVDYSDHHPVVVRL 376


>gi|149248308|ref|XP_001528541.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146448495|gb|EDK42883.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 503

 Score = 66.7 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 6/69 (8%)

Query: 203 HLYSFWDYYADSWSKNKGIRIDHIML-SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
            +Y+ W+    S   N G RID I+  S E    + +A I     G    SDH PV    
Sbjct: 323 KMYTVWNTLTSSRQINYGSRIDLILCNSHEMVKSISNADIWPFILG----SDHCPVFTDF 378

Query: 262 DIPEPRKKQ 270
           D+  PRK  
Sbjct: 379 DL-LPRKDD 386



 Score = 46.7 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 19/48 (39%), Gaps = 9/48 (18%)

Query: 4  VTVATWNVNSIRARIH---------NLAAWIKENNPDIICLQETKTED 42
          +   T+NVN ++   +         +  A       DII LQE K  +
Sbjct: 21 IRFITFNVNGVKTVFNYHPWNKFNNDFNAMFNSLEADIITLQELKLTE 68


>gi|262198893|ref|YP_003270102.1| endonuclease/exonuclease/phosphatase [Haliangium ochraceum DSM
           14365]
 gi|262082240|gb|ACY18209.1| Endonuclease/exonuclease/phosphatase [Haliangium ochraceum DSM
           14365]
          Length = 300

 Score = 66.7 bits (161), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 42/273 (15%), Positives = 77/273 (28%), Gaps = 55/273 (20%)

Query: 4   VTVATWNVN--SIRARIHNLAAWIKENNPDIICLQET-----KTEDKNFPFETLQSLNYH 56
           V VATWNV      + I  LA  ++E + D++ LQE      ++   N P    +++   
Sbjct: 65  VRVATWNVAIAGF-SSIDTLARELREIDADVVLLQELEVGARRSGRVNQPRALAEAMGMD 123

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                   Y+G                    L           +++ + +    +    G
Sbjct: 124 YAFAPSVPYDGGIFGLTV-------------LTRLPLARAERHSLDGEIVYEPRIAFEVG 170

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
               +   + ++  +       +    L       G     P             D    
Sbjct: 171 ACAGA--LELRLIDVHAEYVPETNTDNLARLAELIGPVGDQPIAVA--------GDLNTR 220

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
                    L + G  D          +Y                 ID+++ SP    ++
Sbjct: 221 PANAGIVALLADTGLVDLFHEEGGEPAIY-----------------IDYVLASPPLAEIV 263

Query: 237 H-SARIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268
             S R+D+        SDH P+ V  D+     
Sbjct: 264 RESVRVDSD------ASDHAPLWVEFDLSAWAD 290


>gi|16508047|gb|AAL17972.1| pORF2 [Mus musculus domesticus]
          Length = 1281

 Score = 66.7 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 45/251 (17%), Positives = 76/251 (30%), Gaps = 32/251 (12%)

Query: 6   VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + N+N + + I    L  W+ + +P   CLQET   +K+  +  ++      +  G K
Sbjct: 17  LISLNINGLNSPIKRHRLTDWLHKQDPTFCCLQETHLREKDRHYLRVKGWKTIFQANGLK 76

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
              GVAIL   +                              + I    L     I +  
Sbjct: 77  KQAGVAILISDKIDLQPK--------------VIKKDKEGHFILIKGKILQEELSILNIY 122

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
             +  +           +  +    I  GD+N      D         D     EV +  
Sbjct: 123 APNARAATFIRDTLVKLKAYIAPHTIIVGDFNTPLSSKDRSWKQKLNRDTVKLTEVMKQM 182

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
                   TD  R  +     Y+F+     ++SK     IDHI+      +   +  I  
Sbjct: 183 ------DLTDIYRTFYPKTKEYTFFSAPHGTFSK-----IDHIIGHKTGLNRYKNIEIVP 231

Query: 244 KPRGWTKPSDH 254
                   SDH
Sbjct: 232 CIL-----SDH 237


>gi|326511341|dbj|BAJ87684.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 306

 Score = 66.7 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 37/245 (15%), Positives = 66/245 (26%), Gaps = 23/245 (9%)

Query: 50  LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
            +           K       + K    + V+                        L + 
Sbjct: 64  FKDYRVWWSLSDSKYAGTAVFMKKKFEPKKVSFNLDRTSSKHDADGRVIIVEFESFLLLN 123

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII- 168
                +G       +  +  W KR L F  Q    ++PLI+ GD N+     D  +P   
Sbjct: 124 TYAPNNGWKEEENSFQRRRKWDKRMLEFVQQV---DKPLIWCGDLNVSHGEIDVSHPDFF 180

Query: 169 -----WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF----------WDYYAD 213
                         +  Q    L        I +       Y +          + +  +
Sbjct: 181 SDAKLNGYIPPNKEDCGQPGFTLAERQRFGNILSQGKLVDAYRYLHKEKDMECGFSWSGN 240

Query: 214 SWSKNKG--IRIDHIMLSPEATSLLHSARIDTK--PRGWTKPSDHTPVIVSLDIPEPRKK 269
              K +G  +RID+ ++S      + S  +            SDH PV + L        
Sbjct: 241 PIGKYRGKRMRIDYFVVSEGLKDRIVSCEMHGHGIELEGFYGSDHCPVSLELSKEAAEAP 300

Query: 270 QQDST 274
           +  S+
Sbjct: 301 ESKSS 305


>gi|153805804|ref|ZP_01958472.1| hypothetical protein BACCAC_00041 [Bacteroides caccae ATCC 43185]
 gi|149130481|gb|EDM21687.1| hypothetical protein BACCAC_00041 [Bacteroides caccae ATCC 43185]
          Length = 368

 Score = 66.7 bits (161), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/276 (12%), Positives = 86/276 (31%), Gaps = 36/276 (13%)

Query: 4   VTVATWNV-NSIRARIHN----LAAWIKENNPDIICLQETKT-------EDKNFPFETLQ 51
           + + ++NV N       +    + +++  +  DIICLQE           + +   + L+
Sbjct: 108 IKILSYNVMNFSNLEKKDGKNPILSYLVNSKADIICLQEYNAAQNKKYLTEADI-KKALK 166

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
           +  Y+      +S   +A  SKY  + +         +   +++     +N  T+ + N 
Sbjct: 167 AYPYYSVRRQNRSDVQLACFSKYPILSVSPIDYESTYNGSVKYV---LAVNNDTVTLINN 223

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
           +L         +   +           +++++     +               + +    
Sbjct: 224 HLESNKLTKEDRGMYEDMIK----DPNAKKVKTGLRQLVKKLAEASAIRASQADSVNKAI 279

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYS------FWDYYADSWSKNKGIRIDH 225
                  +                  T      ++         Y  + +      RID+
Sbjct: 280 TESKYPTIIACGDFNDGSISYTHRILTQKLDDAFTQSGKGLGISYNQNKFY----FRIDN 335

Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           I++SP   +   +  +D       K SDH P+   +
Sbjct: 336 ILISPNLKAY--NCTVDRSI----KASDHYPIWCHI 365


>gi|241949837|ref|XP_002417641.1| DNA repair (apurinic or apyrimidinic site) lyase 2, putative;
           apurinic-apyrimidinic endonuclease 2, putative [Candida
           dubliniensis CD36]
 gi|223640979|emb|CAX45326.1| DNA repair (apurinic or apyrimidinic site) lyase 2, putative
           [Candida dubliniensis CD36]
          Length = 422

 Score = 66.3 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 5/70 (7%)

Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSP-EATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
            +Y+ W+   ++   N G RID I+ S  +    + +A I     G    SDH PV    
Sbjct: 320 KMYTVWNTLTNARQVNHGSRIDLILFSDLKMVQRISNADIWPFLMG----SDHCPVFTDC 375

Query: 262 DIPEPRKKQQ 271
           DI E      
Sbjct: 376 DISENDDNSS 385



 Score = 49.4 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 19/50 (38%), Gaps = 9/50 (18%)

Query: 2  SVVTVATWNVNSIRARI---------HNLAAWIKENNPDIICLQETKTED 42
          S +   T+NVN ++             +  A       DII LQE K  +
Sbjct: 23 STIRYVTFNVNGVKTIFNYHPWNQFNKDFNALFNSLQADIITLQELKLTE 72


>gi|313159067|gb|EFR58442.1| endonuclease/exonuclease/phosphatase family protein [Alistipes sp.
           HGB5]
          Length = 348

 Score = 66.3 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 43/267 (16%), Positives = 81/267 (30%), Gaps = 34/267 (12%)

Query: 4   VTVATWNVNSIR--------ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55
           + +AT NVN  R        A    +A  ++    D++CLQE   +D  FP +++ +L  
Sbjct: 104 IRIATLNVNGFRQLGPKSITAAA--VAEMMRHEQVDVLCLQEF-LDDGEFPADSIGAL-- 158

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
              +     +      +      I+        D    ++ A   +   TLRI +++L  
Sbjct: 159 --FSRRMPYFVSEGNGAVASRYPILDCKYVRFPDTSNDYLRADLLVEGDTLRIFSVHLQT 216

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
                  +   K    +  +      ++    +  A    I  +      P+I   D   
Sbjct: 217 SGIAQLRRRFQKDYNREAPVDSMLGAVDRNSRIRAAQVREIRAETDASPYPVILAGDFND 276

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG-IRIDHIMLSPEATS 234
           T       +    +             + Y        ++    G +RID++        
Sbjct: 277 TPSSYTYREMKGALT-----DGFRRCGNGY------GGTFRYLGGLLRIDYVFYDDTF-- 323

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261
                            SDH  VI  L
Sbjct: 324 -----ECVRYYMPSEVVSDHKVVIAEL 345


>gi|209553980|gb|AAA39398.2| ORF2 [Mus musculus domesticus]
          Length = 1300

 Score = 66.3 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 46/251 (18%), Positives = 77/251 (30%), Gaps = 32/251 (12%)

Query: 6   VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + N+N + + I    L  W+ + +P   CLQET   +K+  +  ++      +  G K
Sbjct: 36  LISLNINGLNSPIKRHRLTDWLHKQDPTFCCLQETHLREKDRHYLRVKGWKTTFQANGLK 95

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
              GVAIL   +                              + I    L     I +  
Sbjct: 96  KQAGVAILISDKIDFQPK--------------VIKKDKEGHFILIKGKILQEELSILNIY 141

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
             +  +           +  +    I  GD+N      D         D     EV +  
Sbjct: 142 APNARAATFIRDTLVKLKAYIAPHTIIVGDFNTPLSSKDRSWKQKLNRDTVKLTEVMKQM 201

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
                   TD  RA +     Y+F+     ++SK     IDHI+      +   +  I  
Sbjct: 202 ------DLTDIYRAFYPKTKGYTFFSAPHGTFSK-----IDHIIGHKTGLNRYKNIEIVP 250

Query: 244 KPRGWTKPSDH 254
                   SDH
Sbjct: 251 CIL-----SDH 256


>gi|34392589|dbj|BAC82628.1| pol-like protein [Anopheles gambiae]
          Length = 1077

 Score = 66.3 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 48/277 (17%), Positives = 88/277 (31%), Gaps = 44/277 (15%)

Query: 6   VATWNVNSIRAR--IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +A+ N+N+I +   +  L  +I+  + D+I LQE    D   P        Y++ +    
Sbjct: 18  IASININTISSATKLEALKTFIRTMDLDVIFLQEVYHTDLALP-------GYNVLSNVDA 70

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           S  G AI  +                     +E +       +R+ N+         S  
Sbjct: 71  SRRGTAIALRDHLKF--------------SHVERSLDSRLICVRLENIATLCNVYAPSGS 116

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
                         A         +I AGD+N + +  D                     
Sbjct: 117 QRGAEREEFFNRTVAFYLRNACPHVILAGDFNCVLKSKDV---------TGGGNFSLALR 167

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             + +MG +D+  A       +S+            G RID   +S    + L +  +  
Sbjct: 168 NAVNSMGMSDSWEALRGNSVEFSYIT-------SGSGSRIDRCYVSSSLETQLRTTDMH- 219

Query: 244 KPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
                   SDH  + V L +P P  +  ++    ++P
Sbjct: 220 ----VLSFSDHKALTVRLCLPTPPNRLTNNGYWQLRP 252


>gi|558908|gb|AAA67727.1| reverse transcriptase [Mus musculus]
          Length = 1281

 Score = 66.3 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 45/251 (17%), Positives = 76/251 (30%), Gaps = 32/251 (12%)

Query: 6   VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + N+N + + I    L  W+ + +P   CLQET   +K+  +  ++      +  G K
Sbjct: 17  LISLNINGLNSPIKRHRLTDWLHKQDPTFCCLQETHLREKDRHYLRVKGWKTIFQANGLK 76

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
              GVAIL   +                              + I    L     I +  
Sbjct: 77  KQAGVAILILDKIDFQPK--------------VIKKDKEGHFILIKGKILQEELSILNIY 122

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
             +  +           +  +    I  GD+N      D         D     EV +  
Sbjct: 123 APNARAATFIRDTLVKLKAYIAPHTIIVGDFNTPLSSKDRSWKQKLNRDTVKLTEVMKQM 182

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
                   TD  R  +     Y+F+     ++SK     IDHI+      +   +  I  
Sbjct: 183 ------DLTDIYRTFYPKTKGYTFFSAPHGTFSK-----IDHIIGHKTGLNRYKNIEIVP 231

Query: 244 KPRGWTKPSDH 254
                   SDH
Sbjct: 232 CIL-----SDH 237


>gi|149041085|gb|EDL95042.1| rCG20251 [Rattus norvegicus]
          Length = 475

 Score = 66.3 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 47/251 (18%), Positives = 76/251 (30%), Gaps = 32/251 (12%)

Query: 6   VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + N+N + + I    L  WI+  +P   CLQET   DK+  +  ++      +  GQK
Sbjct: 12  LISLNINGLNSPIKRHRLTNWIRNEDPAFCCLQETHLRDKDRHYLRVKGWKTTFQANGQK 71

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
              GVAIL   +                 +            + I          I +  
Sbjct: 72  KQAGVAILISNKINF--------------QLKVIKKDKEGHFIFIKGKIHQDELSILNIY 117

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
             +  +           +  +    I  GD+N      D        +D     EV    
Sbjct: 118 APNTRAPTYVKETLLKLKTHIAPHTIIVGDFNTPLSSMDRSWKQKLNSDVDRLREVMNQM 177

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
                   TD  R  +     Y+F+     ++SK     IDHI+      +      I  
Sbjct: 178 ------DLTDIYRTFYPKAKGYTFFSAPHGTFSK-----IDHIIGQKTGLNRYRKIEIIP 226

Query: 244 KPRGWTKPSDH 254
                   SDH
Sbjct: 227 -----CMLSDH 232


>gi|260941766|ref|XP_002615049.1| hypothetical protein CLUG_05065 [Clavispora lusitaniae ATCC 42720]
 gi|238851472|gb|EEQ40936.1| hypothetical protein CLUG_05065 [Clavispora lusitaniae ATCC 42720]
          Length = 404

 Score = 66.3 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 5/62 (8%)

Query: 204 LYSFWDYYADSWSKNKGIRIDHIMLS-PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
           +Y+ W+    +   N G RID I+ S  E    + +A I     G    SDH PV   +D
Sbjct: 113 MYTVWNTRTGARQANFGSRIDLILASGGEFIRNVVNADILPFLYG----SDHAPVFTDVD 168

Query: 263 IP 264
           + 
Sbjct: 169 VS 170


>gi|297200389|ref|ZP_06917786.1| endonuclease/exonuclease/phosphatase [Streptomyces sviceus ATCC
           29083]
 gi|197709508|gb|EDY53542.1| endonuclease/exonuclease/phosphatase [Streptomyces sviceus ATCC
           29083]
          Length = 275

 Score = 66.3 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 43/277 (15%), Positives = 74/277 (26%), Gaps = 23/277 (8%)

Query: 1   MSVVTVATWNVNSIR-----ARIHNLAAWIKENNPDIICLQETK-TEDKNFPFETLQSLN 54
           MS + V TWN+   R     AR   + A ++E  PD++ LQE      +N        L 
Sbjct: 1   MSAMRVVTWNLW-WRFGPWEARQKAILAALRELRPDVVGLQEVWSAGSENLAEWLAGELG 59

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
            H       +            +E+   +      +    +      +    R+      
Sbjct: 60  LHWAWAASPASERWQRRIGDPGVEVGNAVLSRWPVIDRAVLRLPAPEDLDDGRLAFHTRL 119

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
            G       +   ++          Q++      +          P    +   W +   
Sbjct: 120 AGPSYDIPFFTTHLTSAPTASAIRCQQVTALAEFVATHRSGTDFPPVITGDFNAWPDSDE 179

Query: 175 FTLEVRQSF-QKLQNMGFTDAIRATHDTHHLYSF---WDYYADSWSKNKGIRIDHIMLSP 230
             L              F DA    + T    ++     Y   S       RID+I +  
Sbjct: 180 IRLFGGYKTAPAAPGQLFLDAWEYANPTAPSATWDPANPYVRMSPPA----RIDYIHV-- 233

Query: 231 EATSLLHSARIDTKPRGWTK------PSDHTPVIVSL 261
                     +    R          PSDH  V+  L
Sbjct: 234 GLAGPAGLGHVLKVRRAGDGPVDGVWPSDHLAVVADL 270


>gi|255567610|ref|XP_002524784.1| hydrolase, putative [Ricinus communis]
 gi|223535968|gb|EEF37627.1| hydrolase, putative [Ricinus communis]
          Length = 523

 Score = 66.3 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 48/288 (16%), Positives = 95/288 (32%), Gaps = 26/288 (9%)

Query: 6   VATWNV-NSI-----RARIHNLAAWIKENNPDIICLQETKTEDKN--FPFETLQ---SLN 54
           +++ NV N +     R+R   +   +KE + DI+ LQ+ K E++    P   L     +N
Sbjct: 227 ISSRNVVNGVDRDNYRSR-RTVVEVLKELDADILALQDVKAEEEKEMKPLSDLAAALGMN 285

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           Y +         G AILSK+           DD D +              + +   +L 
Sbjct: 286 Y-VFAESWAPEYGNAILSKWPIKRWEVQKIFDDTDFRNVLKATIDAPQKGEVNLYCTHLD 344

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLEL-EEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
           H +     K  + I          +  L   +E    A  +  I + H+       + + 
Sbjct: 345 HLDENWRMKQINAIIQSTDGPHILAGGLNSLDETDYSAERWTDIVKYHEEIGKPTPKVEV 404

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
              L+ +      +  G  +++       ++               G R+D+I+ S  + 
Sbjct: 405 MGFLKSKHYTDAKEFAGECESVVMIAKGQNV------QGTCK---YGTRVDYILASSNSP 455

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSL-DIPEPRKKQQDSTSQNMKP 280
                             SDH  V V +  +      +++   +  +P
Sbjct: 456 YKFVPGS--YSVYSSKGTSDHHIVKVDIVKVSSSSSDRENVARKRRQP 501


>gi|34392563|dbj|BAC82611.1| pol-like protein [Danio rerio]
          Length = 1267

 Score = 66.3 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 41/262 (15%), Positives = 80/262 (30%), Gaps = 26/262 (9%)

Query: 1   MSVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           M ++ V + N N +R       L   I+    ++I LQET +   N     L      + 
Sbjct: 19  MEILRVGSLNTNGLRDEKKRNLLLESIRIKQLNVIFLQETHSNSNNEAEWGLCWKGEKVL 78

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
           + G     GVAIL        +  +   +L            ++   + +          
Sbjct: 79  SHGTNLSAGVAILFSSALKVQILMINEIELGRLVAVRAKINDLSFLFINVYAQNNGADRL 138

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
              +  +  +   +             + +I  GD+N               ++      
Sbjct: 139 KLFSNLECFLKQQQD-----------GDFIIIGGDWNCTLD-----FKYDRNSEEPHMQS 182

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
             +    L+N  F+D  R  + +   Y++       +    G R+D   +S    + +  
Sbjct: 183 ASRLAGILKNQYFSDVWREQNASIKQYTWVKINDGRF---SGARLDRFYVSNNVKNRVVG 239

Query: 239 ARIDTKPRGWTKPSDHTPVIVS 260
           A I          SDH  + V 
Sbjct: 240 ANIIPS-----FLSDHKLITVE 256


>gi|302664446|ref|XP_003023853.1| DNA lyase Apn2 [Trichophyton verrucosum HKI 0517]
 gi|291187871|gb|EFE43235.1| DNA lyase Apn2 [Trichophyton verrucosum HKI 0517]
          Length = 588

 Score = 66.3 bits (160), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 27/85 (31%), Gaps = 17/85 (20%)

Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK--------- 244
                     +Y+ W+   ++   N G RID+I+ S    S    + I            
Sbjct: 223 CREFHPSRTGMYTCWNQKVNARPGNYGSRIDYILCSDNIRSWFVESNIQEGLIVCVKFGL 282

Query: 245 --------PRGWTKPSDHTPVIVSL 261
                        + SDH PV  S+
Sbjct: 283 ISPSFNNLLIPNEQGSDHCPVYASI 307


>gi|326675025|ref|XP_003200252.1| PREDICTED: transposon TX1 uncharacterized 149 kDa protein-like
           [Danio rerio]
          Length = 1297

 Score = 66.3 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 36/252 (14%), Positives = 74/252 (29%), Gaps = 29/252 (11%)

Query: 6   VATWNVNSIRARIH--NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           VA+ NVN  R       +   IK+   D++C+QET ++  N      +     I +    
Sbjct: 6   VASLNVNGARDIRKRYQIYEIIKQKRIDVLCIQETHSDALNSSDWGKEFDGLSILSHLNS 65

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           + +GVAIL     + +   +         +        +   + +        N +    
Sbjct: 66  TSSGVAILFSKSFVPVSYQVDEVIKGRLLKVDAQFEKYSFIFICVYV----PVNALERMV 121

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           + D +S +              +        +         +              ++  
Sbjct: 122 FLDTLSNVLSNCDTDKVLFLGGDFNCTESMLDRNHVEPHMAS-------------QKRLI 168

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARID 242
           Q ++     D  R  + +   Y++    A +      + R+D         +L  S  I 
Sbjct: 169 QLIKTHEIVDVWRNFNGSQRQYTW----AHARDNLISLARLDRFYCFKHQFNLFRSCSIC 224

Query: 243 TKPRGWTKPSDH 254
                    SDH
Sbjct: 225 P-----VSFSDH 231


>gi|189461652|ref|ZP_03010437.1| hypothetical protein BACCOP_02315 [Bacteroides coprocola DSM 17136]
 gi|189431624|gb|EDV00609.1| hypothetical protein BACCOP_02315 [Bacteroides coprocola DSM 17136]
          Length = 360

 Score = 66.3 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/252 (13%), Positives = 66/252 (26%), Gaps = 29/252 (11%)

Query: 21  LAAWIKENNPDIICLQE----TKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQP 76
           +  ++++++ DIICLQE     K + K      L    YH+   G+              
Sbjct: 125 VLNYLRDSDADIICLQEFNPSAKVKQKEIDR-ALACYPYHVRVKGEGPGRLACYSRYPIL 183

Query: 77  IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
                         ++               +        N + +         +K    
Sbjct: 184 SAETIDY-----KTESNASILYRLKFGNDTLVLINNHLESNKLDAHDKTVYNDILKSPRE 238

Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIR 196
              +          A    +     D     I  N   + L          +       +
Sbjct: 239 KNIKNGGKHLFHKIAKVVAVRAPQADSVAQAIAVNRTRYMLVCGDFNDSPISYAHRVVGQ 298

Query: 197 ATHDTHHL------YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
             +D +        +++++            RIDHI  S      +   +ID        
Sbjct: 299 GLNDVYRKAGRGPGFTYYENRFY-------FRIDHIFASDAF--RILECKIDRSI----N 345

Query: 251 PSDHTPVIVSLD 262
            SDH PV   L+
Sbjct: 346 TSDHYPVWCLLE 357


>gi|39652285|dbj|BAD04856.1| reverse transcriptase [Takifugu rubripes]
          Length = 1154

 Score = 66.3 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/265 (13%), Positives = 75/265 (28%), Gaps = 31/265 (11%)

Query: 3   VVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
            + ++T NV S+R+R+    + +++     D+  LQE               L +     
Sbjct: 2   TLNISTINVRSVRSRVRAQSVLSFLSSFKSDVFLLQEC-------------GLPFLNHYR 48

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
             +       L           +     + Q     +T   N + L     ++     I 
Sbjct: 49  QWEEMWPQTSLWSGSNENRNDGVAILIKNPQVLVKGSTVVKNGRALLTHLTFMGQDFKIL 108

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
           +    ++ +     L      +    PL+  GD+N I       +      D        
Sbjct: 109 NIYGFNEKNDRYDLLEDLQSHMLGRVPLVVGGDFNCIL---SRKDRRRTGEDFKVDKTSV 165

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
                 ++    D  +  H     ++++          +  RID++              
Sbjct: 166 LLQGICRDFKLQDCFKTMHPREEGFTWFSGDGT-----RASRIDYVFT--------RDCP 212

Query: 241 IDTKPRGWTKPSDHTPVIVSLDIPE 265
                      SDH  +  +L +P 
Sbjct: 213 ATDARLTPVFFSDHLMLSCTLSLPS 237


>gi|326671079|ref|XP_003199357.1| PREDICTED: transposon TX1 uncharacterized 149 kDa protein-like,
           partial [Danio rerio]
          Length = 1298

 Score = 66.3 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 36/252 (14%), Positives = 74/252 (29%), Gaps = 29/252 (11%)

Query: 6   VATWNVNSIRARIH--NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           VA+ NVN  R       +   IK+   D++C+QET ++  N      +     I +    
Sbjct: 7   VASLNVNGARDIRKRYQIYEIIKQKRIDVLCIQETHSDALNSSDWGKEFDGLSILSHLNS 66

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           + +GVAIL     + +   +         +        +   + +        N +    
Sbjct: 67  TSSGVAILFSKSFVPVSYQVDEVIKGRLLKVDAQFEKYSFIFICVYV----PVNALERMV 122

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           + D +S +              +        +         +              ++  
Sbjct: 123 FLDTLSNVLSNCDTDKVLFLGGDFNCTESMLDRNHVEPHMAS-------------QKRLI 169

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARID 242
           Q ++     D  R  + +   Y++    A +      + R+D         +L  S  I 
Sbjct: 170 QLIKTHEIVDVWRNFNGSQRQYTW----AHARDNLISLARLDRFYCFKHQFNLFRSCSIC 225

Query: 243 TKPRGWTKPSDH 254
                    SDH
Sbjct: 226 P-----VSFSDH 232


>gi|56525|emb|CAA43595.1| unnamed protein product [Rattus norvegicus]
          Length = 500

 Score = 66.3 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 47/251 (18%), Positives = 76/251 (30%), Gaps = 32/251 (12%)

Query: 6   VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + N+N + + I    L  WI+  +P   CLQET   DK+  +  ++      +  GQK
Sbjct: 37  LISLNINGLNSPIKRHRLTNWIRNEDPAFCCLQETHLRDKDRHYLRVKGWKTTFQANGQK 96

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
              GVAIL   +                 +            + I          I +  
Sbjct: 97  KQAGVAILISNKINF--------------QLKVIKKDKEGHFIFIKGKIHQDELSILNIY 142

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
             +  +           +  +    I  GD+N      D        +D     EV    
Sbjct: 143 APNTRAPTYVKETLLKLKTHIAPHTIIVGDFNTPLSSMDRSWKQKLNSDVDRLREVMSQM 202

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
                   TD  R  +     Y+F+     ++SK     IDHI+      +      I  
Sbjct: 203 ------DLTDIYRTFYPKAKGYTFFSAPHGTFSK-----IDHIIGQKTGLNRYRKIEIIP 251

Query: 244 KPRGWTKPSDH 254
                   SDH
Sbjct: 252 -----CMLSDH 257


>gi|34541082|ref|NP_905561.1| AP endonuclease domain-containing protein [Porphyromonas gingivalis
           W83]
 gi|34397397|gb|AAQ66460.1| AP endonuclease domain protein [Porphyromonas gingivalis W83]
          Length = 310

 Score = 66.3 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 46/282 (16%), Positives = 87/282 (30%), Gaps = 42/282 (14%)

Query: 2   SVVTVATWNVNSIRARIHN------LAAWIKENNPDIICLQE-------------TKTED 42
           S + V T+NV     R HN      +  +IK +  DI+CLQE              +T  
Sbjct: 46  SRIKVMTYNVKGFDFRAHNSENPNPILKYIKGSGADIVCLQEAVLSRKSNSRYVGLRTFK 105

Query: 43  KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN 102
           K  P      L         +  +G+ +LSKY  +++         +    +   T  I 
Sbjct: 106 KYLPEYRYMEL---SHAREDRKGSGLMLLSKYPILDVHRIPYESAFNGSTAY---TVDIQ 159

Query: 103 TQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD 162
            + + + N +L       +   +      +      S+ +  +    +     +      
Sbjct: 160 GRKVLVVNNHLESFRLTMADGTEYLKMVREGEAAALSRMMTAKMGPAY-ALRAVQADSVS 218

Query: 163 CYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG-- 220
            Y             +   +            ++  +               ++ N+G  
Sbjct: 219 HYIRCSESEHVIVCGDFNDTPISYARHKIASGLKDAYSDTG-------RGPGFTFNQGAF 271

Query: 221 -IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
            +RIDHI+ S    +   +  +D         SDH PV   L
Sbjct: 272 KVRIDHILYSSGFLAY--NCTVDKSV----HASDHFPVWCYL 307


>gi|149021375|gb|EDL78838.1| rCG59047 [Rattus norvegicus]
          Length = 475

 Score = 66.3 bits (160), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 47/251 (18%), Positives = 76/251 (30%), Gaps = 32/251 (12%)

Query: 6   VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + N+N + + I    L  WI+  +P   CLQET   DK+  +  ++      +  GQK
Sbjct: 12  LISLNINGLNSPIKRHRLTNWIRNEDPAFCCLQETHLRDKDRHYLRVKGWKTTFQANGQK 71

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
              GVAIL   +                 +            + I          I +  
Sbjct: 72  KQAGVAILISNKINF--------------QLKVIKKDKEGHFIFIKGKIHQDELSILNIY 117

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
             +  +           +  +    I  GD+N      D        +D     EV    
Sbjct: 118 APNTRAPTYVKETLLKLKTHIAPHTIIVGDFNTPLSSMDRSWKQKLNSDVDRLREVMSQM 177

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
                   TD  R  +     Y+F+     ++SK     IDHI+      +      I  
Sbjct: 178 ------DLTDIYRTFYPKAKGYTFFSAPHGTFSK-----IDHIIGQKTGLNRYRKIEIIP 226

Query: 244 KPRGWTKPSDH 254
                   SDH
Sbjct: 227 -----CMLSDH 232


>gi|148654820|ref|YP_001275025.1| endonuclease/exonuclease/phosphatase [Roseiflexus sp. RS-1]
 gi|148566930|gb|ABQ89075.1| Endonuclease/exonuclease/phosphatase [Roseiflexus sp. RS-1]
          Length = 348

 Score = 66.0 bits (159), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 44/258 (17%), Positives = 79/258 (30%), Gaps = 29/258 (11%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETK-TEDKNFPFETLQSLNYHIETCGQK 63
            V T+N+N    R   + A I+   PDII LQE   +       +      Y +    Q 
Sbjct: 113 RVMTFNINGGNERTDRVLAAIRAAQPDIIALQELNPSIAAALERDLKNEYPYQLL-DPQW 171

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
              G+ I+S++    +   LPGD      + +E       QT+ + N +       +   
Sbjct: 172 GVTGMGIISRFPLRPLAARLPGDRWIGAPQAVEID--TPGQTITLLNFHAIPPVGPSEYM 229

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
                   ++     +       P++ AGD N  P     +          +      + 
Sbjct: 230 TAAIGERERQAEAINAFVQAQRTPVVVAGDMNATPFHRAYHILEHGALSDVWRECGSGAG 289

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
                      +           ++            +RIDH+  +         A +  
Sbjct: 290 FTWPGNRTIGGVPVLP-------WF------------VRIDHLFTTNGIV--CLDASVGP 328

Query: 244 KPRGWTKPSDHTPVIVSL 261
               W   SDH  V+ +L
Sbjct: 329 ----WDGVSDHRAVVATL 342


>gi|16508044|gb|AAL17970.1| pORF2 [Mus musculus domesticus]
          Length = 1281

 Score = 66.0 bits (159), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 45/251 (17%), Positives = 76/251 (30%), Gaps = 32/251 (12%)

Query: 6   VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + N+N + + I    L  W+ + +P   CLQET   +K+  +  ++      +  G K
Sbjct: 17  LISLNINGLNSPIKRHRLTDWLHKQDPTFCCLQETHLREKDRHYLRVKGWKTIFQGNGLK 76

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
              GVAIL   +                              + I    L     I +  
Sbjct: 77  KQAGVAILISDKIDFQPK--------------VIKKDKEGHFILIKGKILQEELSILNIY 122

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
             +  +           +  +    I  GD+N      D         D     EV +  
Sbjct: 123 APNARAATFIRDTLVKLKAYIAPHTIIVGDFNTPLSSKDRSWKQKLNRDTVKLTEVMKQM 182

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
                   TD  R  +     Y+F+     ++SK     IDHI+      +   +  I  
Sbjct: 183 ------DLTDIYRTFYPKTKGYTFFSAPHGTFSK-----IDHIIGHKTGLNRYKNIEIVP 231

Query: 244 KPRGWTKPSDH 254
                   SDH
Sbjct: 232 CIL-----SDH 237


>gi|326670677|ref|XP_003199268.1| PREDICTED: transposon TX1 uncharacterized 149 kDa protein-like
           [Danio rerio]
          Length = 1326

 Score = 66.0 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 36/252 (14%), Positives = 74/252 (29%), Gaps = 29/252 (11%)

Query: 6   VATWNVNSIRARIH--NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           VA+ NVN  R       +   IK+   D++C+QET ++  N      +     I +    
Sbjct: 35  VASLNVNGARDIRKRYQIYEIIKQKRIDVLCIQETHSDALNSSDWGKEFDGLSILSHLNS 94

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           + +GVAIL     + +   +         +        +   + +        N +    
Sbjct: 95  TSSGVAILFSKSFVPVSYQVDEVIKGRLLKVDAQFEKYSFIFICVYV----PVNALERMV 150

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           + D +S +              +        +         +              ++  
Sbjct: 151 FLDTLSNVLSNCDTDKVLFLGGDFNCTESMLDRNHVEPHMAS-------------QKRLI 197

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARID 242
           Q ++     D  R  + +   Y++    A +      + R+D         +L  S  I 
Sbjct: 198 QLIKTHEIVDVWRNFNGSQRQYTW----AHARDNLISLARLDRFYCFKHQFNLFRSCSIC 253

Query: 243 TKPRGWTKPSDH 254
                    SDH
Sbjct: 254 P-----VSFSDH 260


>gi|326675779|ref|XP_003200431.1| PREDICTED: transposon TX1 uncharacterized 149 kDa protein-like
           [Danio rerio]
          Length = 1326

 Score = 66.0 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 36/252 (14%), Positives = 74/252 (29%), Gaps = 29/252 (11%)

Query: 6   VATWNVNSIRARIH--NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           VA+ NVN  R       +   IK+   D++C+QET ++  N      +     I +    
Sbjct: 35  VASLNVNGARDIRKRYQIYEIIKQKRIDVLCIQETHSDALNSSDWGKEFDGLSILSHLNS 94

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           + +GVAIL     + +   +         +        +   + +        N +    
Sbjct: 95  TSSGVAILFSKSFVPVSYQVDEVIKGRLLKVDAQFEKYSFIFICVYV----PVNALERMV 150

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           + D +S +              +        +         +              ++  
Sbjct: 151 FLDTLSNVLSNCDTDKVLFLGGDFNCTESMLDRNHVEPHMAS-------------QKRLI 197

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARID 242
           Q ++     D  R  + +   Y++    A +      + R+D         +L  S  I 
Sbjct: 198 QLIKTHEIVDVWRNFNGSQRQYTW----AHARDNLISLARLDRFYCFKHQFNLFRSCSIC 253

Query: 243 TKPRGWTKPSDH 254
                    SDH
Sbjct: 254 P-----VSFSDH 260


>gi|94501712|ref|ZP_01308226.1| hypothetical protein RED65_04909 [Oceanobacter sp. RED65]
 gi|94426112|gb|EAT11106.1| hypothetical protein RED65_04909 [Oceanobacter sp. RED65]
          Length = 250

 Score = 66.0 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 33/258 (12%), Positives = 71/258 (27%), Gaps = 12/258 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V +WN N     +    + ++    DI+ +QE   ED        +         G+ 
Sbjct: 1   MRVVSWNCNG---ALRQKISAVESLEADILVIQE--CEDPALSTPLYRQWAGSYLWDGES 55

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
              G+ + S+                   +    T    T+ LR+   ++     +    
Sbjct: 56  KNRGIGVFSRNGHKIERIDWNSSFSVPGLKSSSKTLFWETKDLRLFLPFIVDNKYLFLAV 115

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND-ACFTLEVRQS 182
           +    S           +           +  II    +        +     +  + + 
Sbjct: 116 WTKGRSEEVFSYIGQFWKYLQIHRTDLMQENTIILGDLNSNVRWDKPDRWWNHSDVISEL 175

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
                   +            + +F+ +       +    ID+I  S + T    S  I 
Sbjct: 176 DDMGFTSQYHRCFVEGQGLETIPTFFMHRNREKPYH----IDYIFTSSDITDKC-SLNIG 230

Query: 243 TKPRGWTKPSDHTPVIVS 260
           +    W   SDH P+ + 
Sbjct: 231 SYE-DWISKSDHVPLTLD 247


>gi|326672949|ref|XP_003199762.1| PREDICTED: transposon TX1 uncharacterized 149 kDa protein-like,
           partial [Danio rerio]
          Length = 1298

 Score = 66.0 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 36/252 (14%), Positives = 74/252 (29%), Gaps = 29/252 (11%)

Query: 6   VATWNVNSIRARIH--NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           VA+ NVN  R       +   IK+   D++C+QET ++  N      +     I +    
Sbjct: 7   VASLNVNGARDIRKRYQIYEIIKQKRIDVLCIQETHSDALNSSDWCKEFDGLSILSHLNS 66

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           + +GVAIL     + +   +         +        +   + +        N +    
Sbjct: 67  TSSGVAILFSKSFVPVSYQVDEVIKGRLLKVDAQFEKYSFIFICVYV----PVNALERMV 122

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           + D +S +              +        +         +              ++  
Sbjct: 123 FLDTLSNVLSNCDTDKVLFLGGDFNCTESMLDRNHVEPHMAS-------------QKRLI 169

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARID 242
           Q ++     D  R  + +   Y++    A +      + R+D         +L  S  I 
Sbjct: 170 QLIKTHEIVDVWRNFNGSQRQYTW----AHARDNLISLARLDRFYCFKHQFNLFRSCSIC 225

Query: 243 TKPRGWTKPSDH 254
                    SDH
Sbjct: 226 P-----VSFSDH 232


>gi|167393392|ref|XP_001733520.1| DNA-(apurinic or apyrimidinic site) lyase [Entamoeba dispar SAW760]
 gi|165895311|gb|EDR23035.1| DNA-(apurinic or apyrimidinic site) lyase, putative [Entamoeba
           dispar SAW760]
          Length = 272

 Score = 66.0 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 31/134 (23%), Positives = 59/134 (44%), Gaps = 8/134 (5%)

Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL-QNM 189
             + +R   + L+ ++ +I+ GD N+  +  D   P+     A FT E R S  +  + +
Sbjct: 144 WDKDMREHLKELQKKKNVIWCGDLNVALRWIDVAKPMTRLRCAGFTKEERASTSETLKEL 203

Query: 190 GFTDAIRATHDTH-HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGW 248
              D  +  +      Y+F+ Y     SK+ G R+D+  +S +    +   +I    R  
Sbjct: 204 NLVDTFQVKYPKKRDFYTFFSY--KDKSKSAGWRLDYFFISKDLVDSVT--QIYR--RKE 257

Query: 249 TKPSDHTPVIVSLD 262
              SDH P+I+ + 
Sbjct: 258 ISASDHVPLIIHIK 271


>gi|150017193|ref|YP_001309447.1| endonuclease/exonuclease/phosphatase [Clostridium beijerinckii
           NCIMB 8052]
 gi|149903658|gb|ABR34491.1| Endonuclease/exonuclease/phosphatase [Clostridium beijerinckii
           NCIMB 8052]
          Length = 254

 Score = 66.0 bits (159), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 41/270 (15%), Positives = 79/270 (29%), Gaps = 31/270 (11%)

Query: 4   VTVATWNVNSIR------------ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51
           + V T+N   +R            AR   +   I E   DII +QE K    N   +  +
Sbjct: 1   MRVMTFN---LRRDVPIDFNDRWNARRSLIYNVINEYKCDIIGVQEIK---DNMLNDIKE 54

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
           ++   +               +   +    +L  D                     +  +
Sbjct: 55  NI--EVYNIIGAPRGKKVSSERNSLLLSRNYLIEDYKTFWLSETPDKIGSRVWYSYLPRI 112

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
                  + + +     +     L   ++   L++ L F  D  +       +N      
Sbjct: 113 CTTAILQMDNGRRVRVCNTHLDNLLPKARMYGLKKILEFIEDEKLPVILMGDFNDRPNSK 172

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
                 E + S +KL  +   +                   +     KG+ ID+I +S E
Sbjct: 173 LIKSLKEGKISSKKLLPVQDVNMGLYNE---------STIGNFKRSGKGLHIDYIFVSEE 223

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
               + +A I         PSDH P++  +
Sbjct: 224 ID--VVNAEIIKYNVNGKYPSDHYPLMADI 251


>gi|122891324|emb|CAM13025.1| novel protein [Danio rerio]
          Length = 225

 Score = 65.6 bits (158), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 36/243 (14%), Positives = 70/243 (28%), Gaps = 29/243 (11%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETK--TEDKNFPFETLQSLNYHIETC 60
            +   TWNVN ++         +   N DI+ LQET     DK       +         
Sbjct: 5   TINFITWNVNGLKQNRDQKFQEL--QNADIVFLQETHIGVRDKQI-----EDYKKDWVVF 57

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
             K  +     +      +       D D +  ++     +  Q   + ++Y  H +  T
Sbjct: 58  YTKYTSSSRGTAILVRKSLDFECISHDKDNRGAYVVLKCKLAGQKYTLVSVYNHHTDAKT 117

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE--NDACFTLE 178
                               +      L+  GD+N I  P         +  N       
Sbjct: 118 LDNLSRY------------LQKMTTGLLVIGGDFNTILNPFIDKKNNSNKIANKRNQKNL 165

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
                + ++++   D  R  +     ++F+             R+D+  +  E    + S
Sbjct: 166 HLFVDKFMKSLQLADVWRRMNPVKQDFTFY---IRDRPV---SRLDYFFIPDECMWRVRS 219

Query: 239 ARI 241
             I
Sbjct: 220 CEI 222


>gi|326667829|ref|XP_003198680.1| PREDICTED: transposon TX1 uncharacterized 149 kDa protein-like
           [Danio rerio]
          Length = 1297

 Score = 65.6 bits (158), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 36/252 (14%), Positives = 74/252 (29%), Gaps = 29/252 (11%)

Query: 6   VATWNVNSIRARIH--NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           VA+ NVN  R       +   IK+   D++C+QET ++  N      +     I +    
Sbjct: 6   VASLNVNGARDIRKRYQIYEIIKQKRIDVLCIQETHSDALNSSDWCKEFDGLSILSHLNS 65

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           + +GVAIL     + +   +         +        +   + +        N +    
Sbjct: 66  TSSGVAILFSKSFVPVSYQVDEVIKGRLLKVDAQFEKYSFIFICVYV----PVNALERMV 121

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           + D +S +              +        +         +              ++  
Sbjct: 122 FLDTLSNVLSNCDTDKVLFLGGDFNCTESMLDRNHVEPHMAS-------------QKRLI 168

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARID 242
           Q ++     D  R  + +   Y++    A +      + R+D         +L  S  I 
Sbjct: 169 QLIKTHEIVDVWRNFNGSQRQYTW----AHARDNLISLARLDRFYCFKHQFNLFRSCSIC 224

Query: 243 TKPRGWTKPSDH 254
                    SDH
Sbjct: 225 P-----VSFSDH 231


>gi|237716422|ref|ZP_04546903.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|229444069|gb|EEO49860.1| conserved hypothetical protein [Bacteroides sp. D1]
          Length = 279

 Score = 65.6 bits (158), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 34/266 (12%), Positives = 73/266 (27%), Gaps = 22/266 (8%)

Query: 3   VVTVATWNVN--------SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           ++ +A++N+         S   R++ L   ++ N  D+  +QE +T         L   +
Sbjct: 24  IIRLASYNIRTKGDKGDKSWEVRLNALVDVVRRNKFDMFAIQEGRTSQLK-DMMILNEYS 82

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           Y        +      +   +    V                  +    + +     +  
Sbjct: 83  YIGRDRDGDNKGEHCAIYYKKDRFKVLKHGDFWYSETPDIPSYGWGARCRRICTWGYFKD 142

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
                    ++          R  S  + LE+    A                       
Sbjct: 143 LRTGKKFYVFNSHTDHEATEARRQSSFMLLEQVRKIAKGR------PTFCTGDFNATPDE 196

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             +++      L +            +   Y++        +     RID I ++P+   
Sbjct: 197 EPIQLLLKDSLLLDSYKCTLTPPKGPSGSFYAY------DKTGKTAKRIDFIFVTPKIK- 249

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVS 260
           +L    ID   +     SDH PV+V 
Sbjct: 250 ILSYHTIDDDIKYNKYSSDHFPVMVE 275


>gi|147784395|emb|CAN72731.1| hypothetical protein VITISV_037853 [Vitis vinifera]
          Length = 976

 Score = 65.6 bits (158), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 27/260 (10%), Positives = 70/260 (26%), Gaps = 36/260 (13%)

Query: 4   VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + +WN+  + +R     +  +++  NPD++  QETK                 +    
Sbjct: 432 MKIISWNIRGLGSRKKRRVVKDFLRLQNPDVVMFQETK---------------REVCDRR 476

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
                      ++          G  +   ++ +     +           L    P+  
Sbjct: 477 FVGSVWSVKNKEWXAFPACRASGGILITWDSQKMSNEDVVIGFFSVSVKFLLDGCGPL-- 534

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
                   W+       +     +  +     + +   P  C                  
Sbjct: 535 --------WLSAVYGPNNPLTRKDLWVELLDFFGLT-FPSWCVGGDFNVIRRRSEKLGGS 585

Query: 182 SFQKLQNMGFTDAIRATHDTHHL-YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            F +  +    +         +  +++    ++        R+D  + S E       + 
Sbjct: 586 RFTRDFDGFIKECELHDPPLRNASFTW----SNMQESPVCKRLDWFLYSNEWELSFPQSL 641

Query: 241 IDTKPRGWTKPSDHTPVIVS 260
            +  PR     SDH P+++ 
Sbjct: 642 QEVLPR---WTSDHWPIVLD 658


>gi|297172065|gb|ADI23048.1| metal-dependent hydrolase [uncultured Planctomycetales bacterium
           HF0770_03I01]
          Length = 278

 Score = 65.6 bits (158), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 40/285 (14%), Positives = 68/285 (23%), Gaps = 38/285 (13%)

Query: 4   VTVATWNV----------NSIRARIHNLAAWIKENNPDIICLQET-K-------TEDKNF 45
           +   ++N+          N     ++ +A  IKE   D+ CLQE  K        +    
Sbjct: 1   MKFLSYNIQYGKGQKGKHN-----LYRVAETIKET--DVACLQELEKFWQRSGFVDQAQI 53

Query: 46  PFETLQSLN--YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
             E L      Y        S          Q  +    +      +  R          
Sbjct: 54  LSEFLPKFYSVYGPALDMDASLKNQYGQISNQRRQFGNMILSRYPIISTRNFPLPKQGTG 113

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                          I          +    L   +      +  +     N  P     
Sbjct: 114 PDPEHSIQRALLETVINIPGLGYTRVYST-HLSHRNPESRFPQIQLMMRRINQAPHEQGA 172

Query: 164 YNPI-----IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN 218
           ++         E +     +       +     +   +   DT   Y  W         N
Sbjct: 173 WSGEHTDAGWTEGEKPPMPQQFILMGDMNFKLDSKEYKEMVDTEDFYDAWKSNDKDRGTN 232

Query: 219 K-GIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
             G  IDH  +S      +    ID         SDH P+ + +D
Sbjct: 233 VDGDSIDHCFVSKNLLPKIKRTYIDRNIT----ASDHWPLWMEMD 273


>gi|223936857|ref|ZP_03628766.1| Endonuclease/exonuclease/phosphatase [bacterium Ellin514]
 gi|223894426|gb|EEF60878.1| Endonuclease/exonuclease/phosphatase [bacterium Ellin514]
          Length = 273

 Score = 65.2 bits (157), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 41/278 (14%), Positives = 86/278 (30%), Gaps = 56/278 (20%)

Query: 2   SVVTVATWNVN---SI--RARIHNLAAWIKENNPDIICLQET-----KTEDKNFPFETLQ 51
           +   V T+N++    +  +  +  +A  IK+   DI+ LQE      +T  ++FP E  +
Sbjct: 34  NTFRVMTYNIHHGEGLDKQVDLQRIADLIKQEKADIVALQEVDRNTERTGKRDFPAEFTR 93

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
                          G    +       +T      L +     +    +    +++G+ 
Sbjct: 94  LTGMSCVFSNNWPVQGGEYGTAILTRFPITKREHSLLKMVGSKEQR--GLLQAHVKMGDR 151

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
            +   N     +  D+             + + E P+IF GD+N +P            +
Sbjct: 152 EVVVMNTHVDHRKTDEERLESIMEFATVIKKKAELPVIFCGDFNDVPGSPTYEQMSALLD 211

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP- 230
           D+   +   + +                                      RID+I +S  
Sbjct: 212 DSWKLIGEGEGWTIPAEKPR-----------------------------RRIDYIWISKK 242

Query: 231 ----EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
                  + + ++            SDH P++V   +P
Sbjct: 243 GPIIPLRAWVPASE----------ASDHRPLVVEFQLP 270


>gi|86159101|ref|YP_465886.1| endonuclease/exonuclease/phosphatase [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85775612|gb|ABC82449.1| Endonuclease/exonuclease/phosphatase [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 282

 Score = 65.2 bits (157), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 38/266 (14%), Positives = 72/266 (27%), Gaps = 34/266 (12%)

Query: 5   TVATWNVNSIRAR-----IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
            V TWNV+ +R          +A  + +   D+  LQE        P     +       
Sbjct: 25  RVVTWNVHGLRGAGRRPDPERIARVLDDIGADVAGLQEVGAS---LPGADAHAA---EAL 78

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
                 NG    +                           ++  +  R          P+
Sbjct: 79  ARLTGLNGAFGPTLQHARGFAYGNAILSRHPIDATRTYDLSVPGREPRGCLRADVVLGPM 138

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
               +   +    R  R  +  L              I +     +P++   D     + 
Sbjct: 139 RVHVFAAHLGLHWRERRRQAAALLS----------ADILRDAALSHPLVLVGDFNSPSDR 188

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
               + L+      A+ A        S W            +R+D   +       + + 
Sbjct: 189 SAVPRWLRRTLTDCAVAAGRPAATFPSAWPL----------LRLDRAYVDAAL--RVVAC 236

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPE 265
            +   PR   + SDH P++V L++ E
Sbjct: 237 EVVRTPRAR-RASDHLPLVVELELTE 261


>gi|320354767|ref|YP_004196106.1| endonuclease/exonuclease/phosphatase [Desulfobulbus propionicus DSM
           2032]
 gi|320123269|gb|ADW18815.1| Endonuclease/exonuclease/phosphatase [Desulfobulbus propionicus DSM
           2032]
          Length = 259

 Score = 65.2 bits (157), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 44/279 (15%), Positives = 76/279 (27%), Gaps = 40/279 (14%)

Query: 3   VVTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKN--FPFETLQ 51
           ++ V ++N+         N    R H     I+   PD++ LQE + +D    F    L 
Sbjct: 1   MIRVMSFNIRYGLADDGDNHWNRRKHFALDRIRAFGPDLLGLQECR-DDGQAEFVRACLP 59

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ------- 104
             ++            + +          T L      +     +               
Sbjct: 60  EYHFWGVHRQGPGDTALEMAPLLFRRSAFTLLDSGCFWLSESPDDPGSMSWGSNYPRTVS 119

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
            +R+            +T +D + S I    R   Q L+     +               
Sbjct: 120 WVRLACRGTGKTLLYANTHFDYEPSAIDGDARCLRQWLDRHCREMPCIVTGDFNADKRSD 179

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRID 224
              +  +       +RQ   +  N     A     +                      ID
Sbjct: 180 AYRLLTDGGNLLDALRQVAPQGGNESTFHAFGRPEEQAA-------------------ID 220

Query: 225 HIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            I++S      +  ARID    G   PSDH P+   LD 
Sbjct: 221 WILVSSHF--RVTEARIDRSCHGHLFPSDHYPITAVLDW 257


>gi|251779644|ref|ZP_04822564.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum E1 str. 'BoNT E Beluga']
 gi|243083959|gb|EES49849.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum E1 str. 'BoNT E Beluga']
          Length = 258

 Score = 65.2 bits (157), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 39/274 (14%), Positives = 75/274 (27%), Gaps = 31/274 (11%)

Query: 4   VTVATWNVNSIR------------ARIHNLAAWIKENNPDIICLQE-TKTEDKNFPFETL 50
           + V T+N   +R             R   +   I + N DII  QE TK        +  
Sbjct: 1   MKVMTFN---LRCDFFLDFNNRWDERKKLVFDVINKYNCDIIGTQEATK--------KMF 49

Query: 51  QSLNYHIE-TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
           + ++ +IE      +     + S+   I I       +               ++   + 
Sbjct: 50  KDISDNIETFNIIGNPRSKKLFSERNDILISKKHSIIENKTFWLHDNPEKYGRSRWYSMF 109

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
                            +I            R    + L          +         +
Sbjct: 110 PRICTTAIVELENSKRIRICNSHLDFLLPQARAYELKKLSEFIKKEQEKEELPLIIMGDF 169

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
            ++    L        + N           + ++  +      +  +K KG  ID+I +S
Sbjct: 170 NSNPNSKLIKEFINGDVFNKRLVAVQDKKKELYNKAT----MGNFKNKEKGSHIDYIFVS 225

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            E    +    I         PSDH P++  + I
Sbjct: 226 EEFE--IIDVEIVKYNVNGKYPSDHYPLMAEISI 257


>gi|315224062|ref|ZP_07865903.1| endonuclease/exonuclease/phosphatase [Capnocytophaga ochracea
           F0287]
 gi|314946033|gb|EFS98041.1| endonuclease/exonuclease/phosphatase [Capnocytophaga ochracea
           F0287]
          Length = 274

 Score = 65.2 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 43/278 (15%), Positives = 87/278 (31%), Gaps = 42/278 (15%)

Query: 4   VTVATWNV------NSIRA-----RIHNLAAWIKENNPDIICLQE-----TKTEDKNFPF 47
           +TV T+N+      + + A     R   +   + E NPDI  +QE      K  ++ FP 
Sbjct: 20  LTVMTYNIRCEVPQDGVNAWTDGNRKEKVFTVLTEANPDIFGVQEALPHQLKFLEERFPT 79

Query: 48  ETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107
              + +         K     + +   +    +       L          +       R
Sbjct: 80  YQREGVG----RDDGKEAGEHSAIFFKKGRFTLLDKGNFWLSQTPEVPSLGWDATCCN-R 134

Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167
           I +         T   ++       +  +  S  L L++    A    +I          
Sbjct: 135 ICSWVKLKDKKTTFWVFNLHFDHEGKVAQVQSADLVLQKIKEIAKGGKVILMGD------ 188

Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI--RIDH 225
                         + QK+ +  +   +  T+ T ++ +F     +++  ++ +   ID 
Sbjct: 189 ------FNLPTEHPAVQKIASQLYDTQLSPTNKTPNMGTF-----NAFKTDEPLKGHIDF 237

Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           I +       +   +I         PSDH PV V L +
Sbjct: 238 IFVQKSI--KVKQYKIIETRIDGLYPSDHLPVWVELQL 273


>gi|303313137|ref|XP_003066580.1| DNA lyase Apn2, putative [Coccidioides posadasii C735 delta SOWgp]
 gi|240106242|gb|EER24435.1| DNA lyase Apn2, putative [Coccidioides posadasii C735 delta SOWgp]
          Length = 588

 Score = 65.2 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 28/84 (33%), Gaps = 12/84 (14%)

Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR---- 246
           +            +Y+ W+   ++   N G RID+I+ S +    +  A I         
Sbjct: 227 WDMCRSFFPARSGMYTCWEQRINARPGNFGARIDYILCSLDMKDWMSIADIQEGLMVGNN 286

Query: 247 --------GWTKPSDHTPVIVSLD 262
                     ++ SDH PV     
Sbjct: 287 FQYALYQADSSQGSDHCPVYAIFK 310



 Score = 36.3 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 17/57 (29%), Gaps = 20/57 (35%)

Query: 3  VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
             + TWN                    DII LQE K + K+   + +    +    
Sbjct: 2  TFRLTTWN--------------------DIIVLQELKIQRKDLRDDMVLVPGWDCFF 38


>gi|307105550|gb|EFN53799.1| hypothetical protein CHLNCDRAFT_136485 [Chlorella variabilis]
          Length = 1072

 Score = 65.2 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 35/80 (43%), Gaps = 5/80 (6%)

Query: 5  TVATWNVNSIRA----RIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           V ++NVN +RA    R+   L+ ++   N DI+C+QETK    +   +      +    
Sbjct: 11 RVLSFNVNGLRALLRDRLKLTLSQFLISLNADIVCMQETKLRRCDIDRDLAIVDGWDAFF 70

Query: 60 CGQKSYNGVAILSKYQPIEI 79
             +S  G +  + Y    +
Sbjct: 71 SCSQSATGYSGTATYVRTAV 90



 Score = 38.6 bits (88), Expect = 0.91,   Method: Composition-based stats.
 Identities = 18/178 (10%), Positives = 37/178 (20%), Gaps = 1/178 (0%)

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
                +             +++ +    +      +L  +    +    +    L I   
Sbjct: 153 DHGAFVLFNIYGPAITKQEVAEDRMQYKLRFFSALELRWRDLLRQGRAVVAVGDLNICPT 212

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
            L +           +   +                    G     P             
Sbjct: 213 PLDYPVADLQFFRPSRPDRLWLRRLLHGSTTTGGSNSGGGGGDQSPPAAAAAAAGSNGNG 272

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIML 228
            A        S          D  RA H    + ++ W     +   N G RID ++ 
Sbjct: 273 VAGIYGAGASSSNGGSGGILVDTFRAFHPTRQNAFTCWSTATSARVNNYGSRIDLVLT 330


>gi|221060144|ref|XP_002260717.1| exodeoxyribonuclease III [Plasmodium knowlesi strain H]
 gi|193810791|emb|CAQ42689.1| exodeoxyribonuclease III, putative [Plasmodium knowlesi strain H]
          Length = 948

 Score = 65.2 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 50/142 (35%), Gaps = 16/142 (11%)

Query: 1   MSVVTVATWNVNS-------IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFE--TLQ 51
           M  + +A+WNVN        I+ R   +A ++K+ N DI+CLQETKT +     E   L 
Sbjct: 49  MESLQIASWNVNGWKKSCELIKQREVTVAHFLKKLNIDILCLQETKTNNPTIENESSLLD 108

Query: 52  SL--NYHIETCGQKSYNG-----VAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
           +    Y       K   G              +     +     D    F  +    + +
Sbjct: 109 AYSDEYESYWTCCKRRGGGEKIQRGYSGLATYVGNKAKIICCCSDPFRNFFFSVDGFSEE 168

Query: 105 TLRIGNLYLPHGNPITSTKYDD 126
            L +   +    + ++   +  
Sbjct: 169 DLLVSRCFPRDNSSVSFYAFPH 190



 Score = 45.9 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 15/91 (16%), Positives = 34/91 (37%), Gaps = 10/91 (10%)

Query: 187 QNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKP 245
                 D     + + +  ++ WD Y      N+G RID+I +       L  +      
Sbjct: 649 CEDRMVDTFSFFYPSLNGKFTCWDTYKQHRVSNEGSRIDYIFVDFILYERLIRSH----- 703

Query: 246 RGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQ 276
                 S   PV+++ ++    +++ D+  +
Sbjct: 704 -SHLYAS---PVVMTEELRALLRREGDAKGE 730


>gi|73964662|ref|XP_849443.1| PREDICTED: similar to LINE-1 reverse transcriptase homolog [Canis
           familiaris]
          Length = 1384

 Score = 65.2 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 55/264 (20%), Positives = 92/264 (34%), Gaps = 32/264 (12%)

Query: 18  IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPI 77
           +  ++ WIK+ +P I CLQET    K+     ++       + G +   GVAIL   +  
Sbjct: 133 MRRVSDWIKKQDPSICCLQETHFRQKDTYSLKIKGWRTIYHSNGPQKKAGVAILISDKLK 192

Query: 78  EIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF 137
                      D +  +I    +I  + L I N+Y P+                      
Sbjct: 193 FTPK---TVVRDEEGHYIILKGSIQQEDLTILNIYAPNVGAAKYINQ-----------LL 238

Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA 197
              +  L+   +  GD+N+     D  +            E+R     L  M FTD  R 
Sbjct: 239 TKVKKYLDNNTLILGDFNLALSILDRSSKQNISK------EMRALNDTLDQMDFTDIYRT 292

Query: 198 THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257
            H     Y+F+     ++S     RIDHI+      +      I          SDH   
Sbjct: 293 LHPNSTEYTFFSSAHGTFS-----RIDHILGHKSGLNRYQKIGIVPCI-----FSDHNA- 341

Query: 258 IVSLDIPEPRKKQQDSTSQNMKPI 281
              L++   +K  + S +  ++ I
Sbjct: 342 -SKLELNHNKKFGRTSNTWRLRTI 364


>gi|331009392|gb|EGH89448.1| exodeoxyribonuclease III [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 93

 Score = 65.2 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 4/87 (4%)

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
            E     + +  MG+ DA+R        YS+W     +   N G R D+ +L+P     +
Sbjct: 7   PERAWMDEIVGTMGYVDALREVSREGDQYSWWPDNEQAEMLNLGWRFDYQILTPGLRRFV 66

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263
            SAR+  +PR     S H P+IV  D 
Sbjct: 67  RSARLPRQPR----FSQHAPLIVDYDW 89


>gi|194216325|ref|XP_001504052.2| PREDICTED: similar to sphingomyelin phosphodiesterase 2, neutral
           membrane [Equus caballus]
          Length = 560

 Score = 65.2 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 47/296 (15%), Positives = 90/296 (30%), Gaps = 35/296 (11%)

Query: 4   VTVATWNVNSI------RA-RIHNLAAWIKENNPDIICLQETKT-EDKNFPFETLQS-LN 54
           + V + N   I      RA R+  L  ++   + D+  LQE  + +D  +  + L     
Sbjct: 146 LRVFSLNCWGIPYLSKHRADRVKRLGDFLNMESFDLALLQEVWSEQDFQYLRQKLSPTYP 205

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN---- 110
                      +G+ + SK+   EI  H+   +      +    F      L + +    
Sbjct: 206 AAHYFRSGIIGSGLCVFSKHSIQEITQHIYTLNGYPYMIYHGDWFCGKAVGLLVLHLSGL 265

Query: 111 -------LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                        N         +++      +F     +  + ++  GD N+ P+   C
Sbjct: 266 VLNAYVTHLHAEYNRQKDIYLAHRVAQAWELAQFIHHTSKKADVVLLCGDLNLHPKDLGC 325

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223
                W       LE R      +                         +      GIRI
Sbjct: 326 RLLKEWTGLHDAYLETRDFKGSEEGCTMVPENCYV-----------SRQELEPFPLGIRI 374

Query: 224 DHIM---LSPE-ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTS 275
           D+++   +S    +       I   P   T  SDH  ++ +L +     +Q  S +
Sbjct: 375 DYVLYKAVSRFYISCKTLKTTIGRDPHSGTPLSDHEALMATLCVRHSPPQQDASPT 430


>gi|329889440|ref|ZP_08267783.1| endonuclease/Exonuclease/phosphatase family protein [Brevundimonas
           diminuta ATCC 11568]
 gi|328844741|gb|EGF94305.1| endonuclease/Exonuclease/phosphatase family protein [Brevundimonas
           diminuta ATCC 11568]
          Length = 251

 Score = 65.2 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 42/271 (15%), Positives = 90/271 (33%), Gaps = 29/271 (10%)

Query: 5   TVATWNVN---SI--RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
            + T+NV+    +  +  +H +A  I E+ PD++CLQE          +  ++    ++ 
Sbjct: 3   RLLTYNVHRCVGVDRKLDVHRIADVIAEHEPDVVCLQE---------LDVGRARTGWVDQ 53

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
               +      +  +  +++   L GD +                   +  L        
Sbjct: 54  ADAIAQRLAMSVQFHPAMKVEAELYGDAILTHRPERLVRAAALPTLPGLKGLEPRGALWS 113

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                   ++ +   L    +   L+   +   D+   P            N    T   
Sbjct: 114 AVDFDGVVVNILNTHLGLVPREQRLQVAALVGRDWLGDPMCDGPTILTGDFNATSITRPY 173

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           +   ++L +      ++ +       +F   +         IRIDH  +S E    +  A
Sbjct: 174 QALTRRLDDAQRRLGLKPSIK-----TFPSSFPA-------IRIDHCFVSREI--RVTGA 219

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQ 270
           R  + P      SDH P+I+  +I +P+ + 
Sbjct: 220 RTPSSPLARA-ASDHLPLIIDFEIDQPKGQP 249


>gi|255530733|ref|YP_003091105.1| endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM
           2366]
 gi|255343717|gb|ACU03043.1| Endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM
           2366]
          Length = 281

 Score = 64.8 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/267 (14%), Positives = 82/267 (30%), Gaps = 29/267 (10%)

Query: 6   VATWNV------NSIRA---RIHNLAAWIKENNPDIICLQE-TKTEDKNFPFETLQSLNY 55
           V ++N+      +   A   R   + A ++ ++ DI+C+QE    +        L++ NY
Sbjct: 30  VMSYNIRYNNDKDGENAWPNRKDEVKALVRFHDADILCVQEALALQADQL----LENTNY 85

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVT-HLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
            +   G+         S     +       G    +     + +   +   +RI      
Sbjct: 86  EMAGVGRTDGKREGEFSAVYFDKTRFVKKDGGTFWLSDTPEKPSKGWDAAIVRICTW--- 142

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
                    YD                + ++  +  A       Q      P++   D  
Sbjct: 143 ------VRLYDKWNKKEFMVFNTHYDHVGVQARIESAKLIKKKIQEIAPALPVVLTGDLN 196

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
            T E          +  +  +          +F  +  ++  K K   ID+I ++     
Sbjct: 197 VTPETEAITTIKTFLTDSKEVSEEPAYGPEGTFNGFKFNAPLKEK---IDYIFINRGF-- 251

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261
            +    + T  +    PSDH P++  L
Sbjct: 252 KVQKFAVLTDSKNQRYPSDHLPIMARL 278


>gi|123223478|emb|CAM21420.1| apurinic/apyrimidinic endonuclease 2 [Mus musculus]
          Length = 264

 Score = 64.8 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 12/51 (23%)

Query: 5  TVATWNVNSIRARIHNLA------------AWIKENNPDIICLQETKTEDK 43
           V +WN+N IR+ +  LA              + E + DI+CLQETK   +
Sbjct: 1  RVVSWNINGIRSPLQGLACQEPSSCPTALRRVLDELDADIVCLQETKVTSE 51


>gi|260223197|emb|CBA33518.1| hypothetical protein Csp_B19460 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 252

 Score = 64.8 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/262 (10%), Positives = 74/262 (28%), Gaps = 18/262 (6%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + TWN N     +      +   + D+  +QE   ED     +  +         G  
Sbjct: 1   MKIVTWNCNG---ALRKKTEQLDTLDADVYVIQE--CEDPAQSTDVFREWAGSYLWVGTS 55

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
              G+ +  K      +T   G           ++ + +T  L++   +  + +      
Sbjct: 56  KNKGLGVFPKKGNTVKLTEWFGTFKQAGVINSNSSTSWSTADLKLFLPFTLNEDFKFLGI 115

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP---HDCYNPIIWENDACFTLEVR 180
           +                +           +  I+      +  ++      +    +E  
Sbjct: 116 WTKAEGADVFSYIGQLWKYLQIHRAQLRQERTILLGDLNSNSIWDKPDRWWNHSDVVEEL 175

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH-SA 239
           ++                 ++    +F+ +     + +    ID++ +S +         
Sbjct: 176 RAIGLQSAYHRQTGEAQGQESTP--TFFLHRNVEKAYH----IDYVFVSDDLLDQARLDV 229

Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261
                   W   SDH PV +++
Sbjct: 230 G---DSSAWLNSSDHMPVSLTI 248


>gi|300725857|ref|ZP_07059321.1| AP endonuclease domain protein [Prevotella bryantii B14]
 gi|299776845|gb|EFI73391.1| AP endonuclease domain protein [Prevotella bryantii B14]
          Length = 352

 Score = 64.8 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/263 (12%), Positives = 77/263 (29%), Gaps = 19/263 (7%)

Query: 4   VTVATWNV---NSIRA--RIHNLAAWIKENNPDIICLQETKTED---KNFPFETLQSLNY 55
           + V ++NV       +    + +  +IK+ +PDI+CLQE   ++    N      +   Y
Sbjct: 90  IRVMSYNVFLFAGWNSPGTSNGILQYIKKQHPDILCLQEAGCQEIGQANIDSVLDKIYPY 149

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
              +    S +    L    PI     +        +     T   ++  +   +L    
Sbjct: 150 KQYSHHSSSNSETIALYSKFPIVDSVRINYPSKGNFSVAYRVTIDEDSVWIINNHLETTG 209

Query: 116 GNPITSTKYDDKISWIKRFL-RFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
            +      +   +          ++ +L +      +    +       +          
Sbjct: 210 LSQDERKGFKLMMKGEMDHHVAKSTSKLIITRLGESSAKRAVEADAVSEFIEHHQHESII 269

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
              +         +      +   +          Y+   +     +RID+IM + +   
Sbjct: 270 LCGDFNDGPISYTHHTIVKKLIDCYIESGFGPGISYHKGGFF----VRIDNIMCTSDWEP 325

Query: 235 LLHSARIDTKPRGWTKPSDHTPV 257
                 +D K     K SDH P+
Sbjct: 326 F--QCNVDNKI----KLSDHYPI 342


>gi|226311672|ref|YP_002771566.1| hypothetical protein BBR47_20850 [Brevibacillus brevis NBRC 100599]
 gi|226094620|dbj|BAH43062.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 226

 Score = 64.8 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/278 (12%), Positives = 68/278 (24%), Gaps = 62/278 (22%)

Query: 4   VTVATWNVNS-----IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           + V ++N++S      R R++ +   +K+  PDII LQE   ++            Y   
Sbjct: 1   MRVVSYNIHSGRDLWWRNRLNEMTLTLKDLQPDIIGLQEVH-QNGK--------YGYQAS 51

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN- 117
               +    +A        +                         +   +          
Sbjct: 52  YIADQLQYHLAFSPSISIGDGYYGNTLLSKYALENVEAIVLPARKEQRTLLYASFQGFGR 111

Query: 118 ----PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
                +T    +      +  L     +   + PL+  GD+N        +         
Sbjct: 112 TITLCVTHCSLNQVSRLAQLQLMSTLIQQHAKAPLLLMGDFNASNVSFTPHLMDCALVSG 171

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
                   +F+                                     R+D+I  S    
Sbjct: 172 QEKKPTLPAFR------------------------------------RRLDYIFASHHW- 194

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271
                  I+         SDH PVI  L + E     +
Sbjct: 195 ------NIEHYELLPVNWSDHVPVIADLRLTESPVHGE 226


>gi|255692701|ref|ZP_05416376.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           finegoldii DSM 17565]
 gi|260621535|gb|EEX44406.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           finegoldii DSM 17565]
          Length = 317

 Score = 64.8 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 48/302 (15%), Positives = 85/302 (28%), Gaps = 45/302 (14%)

Query: 2   SVVTVATWNV-----------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETL 50
           +  TVA++N+           N    R   +A  ++ ++ DI   QE          E L
Sbjct: 27  TTFTVASYNLRNANGNDSLHGNGWGQRYPVIAKMVQYHDFDIFGTQECFLHQLKDMKEAL 86

Query: 51  QSLNY-HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
              +Y  +     K     + +        +       L          +      +   
Sbjct: 87  PGYDYIGVGRDDGKIQGEHSAIFYRTDKFDIIEKGDFWLSETPDVPSKGWDAVLPRICSW 146

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
             +           ++  +  I +  R  S  L  E+        N+       +N    
Sbjct: 147 GHFKCKDTGFEFLFFNLHMDHIGKKARVESAYLVQEKMKELGKGKNLPAILTGDFNVDQT 206

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
                  +E        +   F  A           +F  +  +S++K    RIDH+ +S
Sbjct: 207 HQSYNAFVEKGVLCDSYEKCDFRYATNG--------TFNSFDPNSFTK---SRIDHVFVS 255

Query: 230 PEA--------------------TSLLHSA--RIDTKPRGWTKPSDHTPVIVSLDIPEPR 267
           P                          +     ID K      PSDH PV V L+  E +
Sbjct: 256 PAFHVKRYGILTDTYRSIVGNGEKENANDCPEEIDIKAYQARTPSDHFPVKVELEFDERQ 315

Query: 268 KK 269
           +K
Sbjct: 316 QK 317


>gi|167763762|ref|ZP_02435889.1| hypothetical protein BACSTE_02142 [Bacteroides stercoris ATCC
           43183]
 gi|167697878|gb|EDS14457.1| hypothetical protein BACSTE_02142 [Bacteroides stercoris ATCC
           43183]
          Length = 374

 Score = 64.8 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 41/271 (15%), Positives = 76/271 (28%), Gaps = 27/271 (9%)

Query: 4   VTVATWNVNSIRARIHN-----LAAWIKENNPDIICLQET-------KTEDKNFPFETLQ 51
           + + ++N+              +  ++KE+N DI+CLQE            K+   E L+
Sbjct: 110 IKLLSYNIMGFDGAYKKDGKNPILTYLKESNADILCLQEYASDESPRHLTQKDIERE-LK 168

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
              Y               ++ Y    I++    D        +     +N  T+ + N 
Sbjct: 169 DYPYRRINVVGSGNGYTNRIACYSKFPILSARVLDYASSYNGSVLYELKLNEDTITLINN 228

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
           +L       + K   +                L    +        PQ       I    
Sbjct: 229 HLESNKLTKADKDIYEEILKAPETEKVKSGARLLLHKLAEASAIRAPQADTIAREIA--- 285

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG---IRIDHIML 228
            +     V                    +    ++         S N+     RID+I++
Sbjct: 286 -SSRHPSVIVCGDFNDTPISYAHRVIAQNLDDAFTQ-SGRGLGISYNQNKFYFRIDNILI 343

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
           S    S   +  +D   R     SDH P+  
Sbjct: 344 SKNLRSY--NCTVDRSIRE----SDHYPIWC 368


>gi|320170015|gb|EFW46914.1| hypothetical protein CAOG_04872 [Capsaspora owczarzaki ATCC 30864]
          Length = 680

 Score = 64.8 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 41/294 (13%), Positives = 80/294 (27%), Gaps = 38/294 (12%)

Query: 4   VTVATWNV---NSI-----RARIHNLAAWIKENNPDIICLQETK--------TEDKNFPF 47
           + V ++N+   N        +R+ ++ + + E   DI+ LQE +            N   
Sbjct: 386 LKVVSFNIWNANGRGEAKYNSRMDHIGSILHEAQADIVALQEVRFDDSLVHSLPPANQAS 445

Query: 48  ETLQSL-NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
           + L+ L  Y        SY         + + I +  P  +                   
Sbjct: 446 DLLRYLPGYQFAFQPAMSYPLDLTGRVEEGLAIYSRYPILNTGYLLLPRIPEDPHQRILF 505

Query: 107 RIGNLYLPHGNPITSTKY------DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP 160
                    G       +         ++ ++ +        +   P +F GD N  P  
Sbjct: 506 HAEIDVPSVGVVDVVVSHFSLVDSARSVAALRVYDFLRKLARDSPRPQLFMGDLNATPLS 565

Query: 161 HDCYNPIIWE--NDACFTLEVRQS----FQKLQNMGFTDAIRATHDTHHLYSFWDYYADS 214
                        +               +   +    D +     + H    +    ++
Sbjct: 566 TAMQFLNGNVTLRNIRVGDMRDVWLALRPEPSYDPRTDDKLPHAPPSDHP--LYGMTFNT 623

Query: 215 WSKNKGIRIDHIML-----SPE-ATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
            +     RID++ L     SP           I   PR    PSDH  ++   D
Sbjct: 624 HANFLSKRIDYMYLRQPAGSPSVLRPRSIDV-IGQHPRDGQMPSDHVGLVAEFD 676


>gi|227536411|ref|ZP_03966460.1| endonuclease/exonuclease/phosphatase family protein
           [Sphingobacterium spiritivorum ATCC 33300]
 gi|227243787|gb|EEI93802.1| endonuclease/exonuclease/phosphatase family protein
           [Sphingobacterium spiritivorum ATCC 33300]
          Length = 371

 Score = 64.8 bits (156), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/288 (12%), Positives = 71/288 (24%), Gaps = 48/288 (16%)

Query: 2   SVVTVATWNVNSIRARIHN--------LAAWIKENNPDIICLQE----TKTEDKNFPFET 49
           S + V ++NV+  +             +   I    PD+IC QE     K     +  E 
Sbjct: 108 SSIRVLSFNVHLFKTAKKGEEKDFKREVLGIIDSIKPDVICFQEYYSKIKG-KHVYAKEL 166

Query: 50  LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
            ++  Y        S N      +    +      G  +  +               RI 
Sbjct: 167 RENFGYKYWYFEPASVNDYEAYGQAIFSKYPVIHSGTIVKNEYGIN-----------RII 215

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
              +  G            S+  +       +    E    A             +    
Sbjct: 216 YADIEKGKKSMRIYNVHLRSFALQNEDKDFIQNPSGESNKTATRRVGRKLKQAFASRSEQ 275

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN-KGI------- 221
                  +E  +    +        +  + +            +++ K   G        
Sbjct: 276 AEALKEHIETAKIPYMVMGDFNDTPMSYSVNLIGK-----GMQNAFQKKGSGWGVTHYEM 330

Query: 222 ----RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
               +ID+I  S +         I        K SDH P+   + + +
Sbjct: 331 LPIFQIDYIFTSNDF-------NILNYQIVKRKLSDHYPIWADVQLKD 371


>gi|256820874|ref|YP_003142153.1| Endonuclease/exonuclease/phosphatase [Capnocytophaga ochracea DSM
           7271]
 gi|256582457|gb|ACU93592.1| Endonuclease/exonuclease/phosphatase [Capnocytophaga ochracea DSM
           7271]
          Length = 274

 Score = 64.4 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 42/278 (15%), Positives = 86/278 (30%), Gaps = 42/278 (15%)

Query: 4   VTVATWNV------NSIRA-----RIHNLAAWIKENNPDIICLQE-----TKTEDKNFPF 47
           +TV T+N+      + + A     R   +   + E NPDI  +QE      K  ++ FP 
Sbjct: 20  LTVMTYNIRCEVPQDGVNAWTDGNRKEKVFTVLTEANPDIFGVQEALPHQLKFLEERFPT 79

Query: 48  ETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107
              + +         K     + +   +    +       L          +       R
Sbjct: 80  YQREGVG----RDDGKGAGEHSAIFFKKGRFTLLDKGNFWLSQTPEVPSLGWDATCCN-R 134

Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167
           I +             ++       +  +  S  L L++    A    +I          
Sbjct: 135 ICSWVKLKDKKTIFWVFNLHFDHEGKVAQVQSADLVLQKIKEIAKGGKVILMGD------ 188

Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI--RIDH 225
                         + QK+ +  +   +  T+ T ++ +F     +++  ++ +   ID 
Sbjct: 189 ------FNLPTEHPAVQKIASQLYDTQLSPTNKTPNMGTF-----NAFKTDEPLKGHIDF 237

Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           I +       +   +I         PSDH PV V L +
Sbjct: 238 IFVQKSI--KVKQYKIIETRIDGLYPSDHLPVWVELQL 273


>gi|262408023|ref|ZP_06084571.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|262354831|gb|EEZ03923.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
          Length = 292

 Score = 64.4 bits (155), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/266 (12%), Positives = 73/266 (27%), Gaps = 22/266 (8%)

Query: 3   VVTVATWNVN--------SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           ++ +A++N+         S   R++ L   ++ N  D+  +QE +T         L   +
Sbjct: 37  IIRLASYNIRTKGDKGDKSWEVRLNALVDVVRRNKFDMFAIQEGRTSQLK-DMMILNEYS 95

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           Y        +      +   +    V                  +    + +     +  
Sbjct: 96  YIGRDRDGDNKGEHCAIYYKKDRFKVLKHGDFWYSETPDIPSYGWGARCRRICTWGYFKD 155

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
                    ++          R  S  + LE+    A                       
Sbjct: 156 LRTGKKFYVFNSHTDHEATEARRQSSFMLLEQVRKIAKGR------PTFCTGDFNATPDE 209

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             +++      L +            +   Y++        +     RID I ++P+   
Sbjct: 210 EPIQLLLKDSLLLDSYKCTLTPPKGPSGSFYAY------DKTGKTAKRIDFIFVTPKIK- 262

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVS 260
           +L    ID   +     SDH PV+V 
Sbjct: 263 ILSYHTIDDDIKYNKYSSDHFPVMVE 288


>gi|237756598|ref|ZP_04585116.1| exodeoxyribonuclease III [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237691244|gb|EEP60334.1| exodeoxyribonuclease III [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 45

 Score = 64.4 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 2/45 (4%)

Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGW--TKPSDHTPVIVSLDI 263
           +RID+I++S      +    +D  PR     KPSDH PVI+ L+I
Sbjct: 1   MRIDYILVSKPLLQYIKDVEVDLWPRRRRSPKPSDHAPVILELEI 45


>gi|282879047|ref|ZP_06287807.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           buccalis ATCC 35310]
 gi|281298781|gb|EFA91190.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           buccalis ATCC 35310]
          Length = 362

 Score = 64.4 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/269 (15%), Positives = 80/269 (29%), Gaps = 28/269 (10%)

Query: 4   VTVATWNV-----NSIRARIHN----LAAWIKENNPDIICLQET----KTEDKNFPFETL 50
           + V ++NV     N       +    +  +IKE + DI+CLQE+    K  DK       
Sbjct: 101 IKVLSYNVWFFGGNG----FEHENNPVLNFIKEQDADIVCLQESDAWGKYSDKAKAL-MY 155

Query: 51  QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
               YH  +  +   + + I S++  I         + +    F           +    
Sbjct: 156 SQYPYHASSHAKNKGDIMDIYSRHPIISQEDINYPSEGNHSTAFYLNIHGDTVIVINNHL 215

Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170
             +       +         IK      S +  +++    +            Y     +
Sbjct: 216 ESIGLSPEDKANFKGVVKGNIKGDSAQISTKTLIKKLGEASSIRAAQADAIAQYIAAHRD 275

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230
                  +                +R  +          Y+   +     +RIDH+M S 
Sbjct: 276 KSVILCGDFNDGPNSYARRTIAKQLRDCYVETANGPGISYHLGGFY----VRIDHMMCSK 331

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIV 259
           + T    + ++D K     K SDH P+  
Sbjct: 332 DWTPY--NCKVDNKI----KASDHYPIYC 354


>gi|294674945|ref|YP_003575561.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           ruminicola 23]
 gi|294472469|gb|ADE81858.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           ruminicola 23]
          Length = 364

 Score = 64.4 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 44/287 (15%), Positives = 82/287 (28%), Gaps = 44/287 (15%)

Query: 3   VVTVATWNVN----------SIRARIHNLAAWIKENNPDIICLQE--------TKTEDKN 44
            + + ++NV                   +  ++ E + DI+CLQE         K     
Sbjct: 100 TIKLISYNVCQYGGNYKYEQG----FEKVHEYLTEQDADIVCLQEDVDTWRRYVK----Q 151

Query: 45  FPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLD----VQARFIEATFT 100
           +  +     +  I        NGV I +KY  I           +       +    T  
Sbjct: 152 WYEKIYPYNDTTIFNPQDACINGVGIHTKYPIIRKERIPYESSGNGSVAYFLQVGNDTVL 211

Query: 101 INTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP 160
           +    L   +L     +            +  +           +     A +   +   
Sbjct: 212 VINNHLEGTHLSNEDRDKYKQMISGKMKKYTAKAETLFLIEKLGKYAAKRAPEAEAVHDY 271

Query: 161 HDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG 220
            + +          F        ++    G TD  + T     L     Y    +     
Sbjct: 272 IEAHRHYPIIVCGDFNDNPISYSRRTIAQGLTDCYQETGKGIGL----SYNQKGFF---- 323

Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPR 267
           +RIDHI++S        +  ID+K       SDH P+I +L +   +
Sbjct: 324 VRIDHILVSDHFEPY--NCHIDSKM----DASDHNPIICTLKMKSNQ 364


>gi|86740550|ref|YP_480950.1| endonuclease/exonuclease/phosphatase [Frankia sp. CcI3]
 gi|86567412|gb|ABD11221.1| Endonuclease/exonuclease/phosphatase [Frankia sp. CcI3]
          Length = 309

 Score = 64.4 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 47/295 (15%), Positives = 84/295 (28%), Gaps = 36/295 (12%)

Query: 1   MSVVTVATWNVNSI----------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETL 50
           M+ V  AT+N   +          R R   +   I+  + D++ +QE    D       L
Sbjct: 1   MAQVRFATYNT--LDLFASDSPDERERYRRVVEVIRGLDADVVAVQEIIAPDVEVAAGRL 58

Query: 51  QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPG-----DDLDVQARFIEATFTINTQT 105
           ++L            N  AI +  Q   +                     +    +   T
Sbjct: 59  RTLADDAGMECTYEPNRPAIAAGRQRFHVGLLWRPGLSVVPGSFRTYGAADFWHALAKIT 118

Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI----IPQPH 161
           + I    + H +   +       +     +     R E   P +   D+N          
Sbjct: 119 IEIAGRQIQHASHHATPFGRHMRADQMERVVAVMTRPEGSPPGLIGADWNCVGADRRPDG 178

Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF------------WD 209
             Y+P  + +   +   + Q+       G             LY+             W+
Sbjct: 179 SYYDPDPYADSDWYADLIYQTVWGYDERGRRRHRADREPGEVLYAGGLADAAVVLDRPWE 238

Query: 210 YYADSWSKNK--GIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
                W  N     RID I ++ E    L +  +          SDH PV V+ +
Sbjct: 239 ATVGHWPGNTFGDRRIDAIRVTAEIAPALRAVEVTRTELAR-SASDHLPVTVTYE 292


>gi|293371502|ref|ZP_06617922.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           ovatus SD CMC 3f]
 gi|292633539|gb|EFF52102.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           ovatus SD CMC 3f]
          Length = 296

 Score = 64.4 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/266 (15%), Positives = 79/266 (29%), Gaps = 22/266 (8%)

Query: 3   VVTVATWNVN-----SIRA---RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           ++ +A++N+        +A   R++ L   ++ N  D+  +QE +T         L   +
Sbjct: 41  IIRLASYNIRTKGDKGDKAWEVRLNALVDVVRRNKFDMFAIQEGRTSQLK-DMMILNEYS 99

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           Y        +      +   +    V                  +    + +     +  
Sbjct: 100 YIGRDRDGDNKGEHCAIYYKKDRFKVLKHGDFWYSETPDIPSYGWGARCRRICTWGYFKD 159

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
             +      ++          R  S  + LE+    A                  + +A 
Sbjct: 160 LRSGKKFYVFNSHTDHEATEARRQSSFMLLEQVRKIAKGR---------PTFCTGDFNAT 210

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
              E  Q   K   +  +     T       SF+ Y     +     RID I ++P+   
Sbjct: 211 PDEEPVQLLLKDSLLLDSYKCTLTPPKGPSGSFYAYDKTGKTAK---RIDFIFVTPKIK- 266

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVS 260
           +L    ID   +     SDH PV+V 
Sbjct: 267 ILSYHTIDDDIKYNKYSSDHFPVMVE 292


>gi|147801137|emb|CAN71042.1| hypothetical protein VITISV_019062 [Vitis vinifera]
          Length = 568

 Score = 64.4 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/259 (11%), Positives = 69/259 (26%), Gaps = 30/259 (11%)

Query: 4   VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + +WNV      ++   + A I+    D+ CLQETK +                    
Sbjct: 112 LRLLSWNVRGANDSSKRKVIKALIRSQRVDVFCLQETKIQA------------------- 152

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
                GV              L                T++   + +G   +        
Sbjct: 153 --MSEGVVRSLGTGRFLGWGALEASGSAGGILVCWDRRTLDVLDVEVGQFSISCRVRNVE 210

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
             +    + +        +    EE     G +++       +N  + + +      +  
Sbjct: 211 DGFCWMFTGVYXPFSRDERECLWEELGAIRGLWDVPWCLGGDFNITLLQGERSRQGRITG 270

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           + ++   M     +          ++              R+D  +++            
Sbjct: 271 AMRRFAQMVDELELTDLPLQGGRCTW----NGGRGSQSWARLDRFLVTQNWLDHFSGVV- 325

Query: 242 DTKPRGWTKPSDHTPVIVS 260
             + R     SDH P+++ 
Sbjct: 326 --QSRLPRPTSDHFPILLE 342


>gi|319900799|ref|YP_004160527.1| Endonuclease/exonuclease/phosphatase [Bacteroides helcogenes P
           36-108]
 gi|319415830|gb|ADV42941.1| Endonuclease/exonuclease/phosphatase [Bacteroides helcogenes P
           36-108]
          Length = 366

 Score = 64.4 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/270 (13%), Positives = 76/270 (28%), Gaps = 27/270 (10%)

Query: 5   TVATWNVNSIRARIHN-----LAAWIKENNPDIICLQET-------KTEDKNFPFETLQS 52
            + ++N+              +  ++KE+  DI+CLQE            K+   E L+ 
Sbjct: 103 KLLSYNIMGFDGATKKDGGNPILTYLKESGADILCLQEYVTIESSRHLSQKDVSHE-LRD 161

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
             YH              ++ Y    I++    +        +     I   T+ + N +
Sbjct: 162 YPYHRINIVGSGKGYTNQIACYSKYPILSARRLNYSSEYNGSVIYEVKIGEDTVTLINNH 221

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
           L       + K   +             +++    L+               + I  E  
Sbjct: 222 LESNKLTKADKVVYEDMLK----SPEKDKVKSGIRLLIRKLAEASAIRAPQADTIANEIA 277

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG---IRIDHIMLS 229
           +     +                    +    ++         S N+     RID+I+ S
Sbjct: 278 SSAHPYIIVCGDFNDTPISYTHRTIAQNMDDAFTQ-SGRGLGISYNQNKFYFRIDNILTS 336

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
               +   +  +D       K SDH P+  
Sbjct: 337 KNLKAY--NCTVDRSI----KESDHYPIWC 360


>gi|222150158|ref|YP_002551115.1| Metal-dependent exonuclease protein [Agrobacterium vitis S4]
 gi|221737140|gb|ACM38103.1| Metal-dependent exonuclease protein [Agrobacterium vitis S4]
          Length = 286

 Score = 64.4 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 45/302 (14%), Positives = 76/302 (25%), Gaps = 59/302 (19%)

Query: 4   VTVATWNV------NS----IRARIHNLAAWIKENNPDIICLQE-TKTEDK----NFPFE 48
           +   ++N+      +     IR    NL         D+I LQE T+        + P E
Sbjct: 1   MRFVSYNIQYGIGLDGKFDPIRIA-KNL------EGADVIALQEVTRGYPANGGADLP-E 52

Query: 49  TLQSLNYHIETCGQKSYNGVAILSKYQPIEIV-THLPGDDLDVQARFIEATFTINTQTLR 107
              +           + +  A  +  +   +      G+ +  +   +     +  +T  
Sbjct: 53  IFANHFPEYHWVYGPACDLHASSALIKGRRVDKRFQFGNMVLSRWPILANRMLLLPRTRT 112

Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP- 166
              L                   +           E    + F  D  I           
Sbjct: 113 FEKLNNQRAATEAVIDAPGGALRVYSVHLDHVAPDERIAQIRFLKDRAINFIQEGGAMTG 172

Query: 167 -IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK-------- 217
              +        E             +   R    T   Y    Y   + +         
Sbjct: 173 GQEFALPQPPLPEDFLLMGDFNMQPESPEYREMVGTIDAY----YGRTARADAPLDALAR 228

Query: 218 ----NKG-----------IR--IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
               N G           +R  +D+  LS      L +A +DT   G    SDH PV V 
Sbjct: 229 LGKLNAGSYSWEEVGKPDMRMHLDYCFLSGSLAHRLKAASVDTDAVG----SDHFPVWVE 284

Query: 261 LD 262
           LD
Sbjct: 285 LD 286


>gi|188588970|ref|YP_001920998.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum E3 str. Alaska E43]
 gi|188499251|gb|ACD52387.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum E3 str. Alaska E43]
          Length = 258

 Score = 64.4 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 46/277 (16%), Positives = 82/277 (29%), Gaps = 37/277 (13%)

Query: 4   VTVATWNVNSIR------------ARIHNLAAWIKENNPDIICLQETKTEDKNFPF---- 47
           + V T+N   +R             R   +   + + N DII  QE    +K F      
Sbjct: 1   MKVMTFN---LRCDFFLDFNNRWDERKKLVFDVMNKYNCDIIGTQE--ATEKMFKDISDN 55

Query: 48  -ETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
            ET   +            N + I  K+  IE  T    D+ +   R    +      T 
Sbjct: 56  IETFNIIGNPRSKKLFSERNDILISKKHSIIENKTFWLHDNPEKYGRSRWYSMFPRICTT 115

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
            I  L       I ++  D  +   + +          +             +       
Sbjct: 116 AIVELKNSKRIRICNSHLDFLLPQARAYELKKLSEFIKK---------EQEKEDLPLIIM 166

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226
             + ++    L        + N           D ++  +      +  +K KG  ID+I
Sbjct: 167 GDFNSNPNSKLIKDFINGDVLNKRLVAVQDKKKDLYNNAT----MGNFKNKEKGSHIDYI 222

Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            +S E    +    I         PSDH P++  ++I
Sbjct: 223 FVSEEFE--IIDVEIVKYNVNGKYPSDHYPLMAEINI 257


>gi|298204331|gb|ADI61814.1| endonuclease-reverse transcriptase [Bombyx mori]
          Length = 1017

 Score = 64.4 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/280 (12%), Positives = 83/280 (29%), Gaps = 19/280 (6%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPD----IICLQETKTEDKNFPFETLQSLNYHIET 59
           + + TWNV  +          + +        I+ + ET      F         + +  
Sbjct: 63  MKIGTWNVRGM--LQPGKREILDKEQAHYNLKILGITETHMRGSGF---YTTPKGHTVYF 117

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            G ++ +   +          + L  + +  +   +          + +        +  
Sbjct: 118 SGPENESKHGVALSVVADINKSVLGYNPVSDRILTVRINTKPCRLNVVVVYAPTSTSSDA 177

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              ++ +++    R L      L + +     GD +      D               E 
Sbjct: 178 DIDEFYNQLDDTLRNLARRDITLVMGDLNAKVGDTSREHHLKDIVGTYGL-GIRNNRGER 236

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
              F    ++   +     H    LY++        ++N+   ID+I +     S + SA
Sbjct: 237 WLHFCAENSLTIMNTCFKNHPR-RLYTW--IMPGDRARNQ---IDYIAIDKRWRSCISSA 290

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMK 279
           +      G    SDH  ++  + +   R K+   ++Q   
Sbjct: 291 KTYP---GADCGSDHKLLVADISLKLKRCKRTSLSTQRRL 327


>gi|300771464|ref|ZP_07081339.1| endonuclease/exonuclease/phosphatase family protein
           [Sphingobacterium spiritivorum ATCC 33861]
 gi|300761453|gb|EFK58274.1| endonuclease/exonuclease/phosphatase family protein
           [Sphingobacterium spiritivorum ATCC 33861]
          Length = 371

 Score = 64.4 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/286 (12%), Positives = 70/286 (24%), Gaps = 48/286 (16%)

Query: 2   SVVTVATWNVNSIRARIHN--------LAAWIKENNPDIICLQE----TKTEDKNFPFET 49
           S + V ++NV+  +             +   I    PD+IC QE     K     +  E 
Sbjct: 108 SSIRVLSFNVHLFKTAKKGEEKDFKREVLGIIDSIKPDVICFQEYYSKIKG-KHVYAKEL 166

Query: 50  LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
            ++  Y        S N      +    +      G  +  +               RI 
Sbjct: 167 RENFGYKYWYFEPASVNDYEAYGQAIFSKYPVIHSGTIVKNEYGIN-----------RII 215

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
              +  G            S+  +       +    E    A             +    
Sbjct: 216 YADIEKGKKSMRIYNVHLRSFALQNEDKDFIQNPSGESNKTATRRVGRKLKQAFASRSEQ 275

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN-KGI------- 221
                  +E  +    +        +  + +            +++ K   G        
Sbjct: 276 AEALKEHIETAKIPYMVMGDFNDTPMSYSVNLIGK-----GMQNAFQKKGSGWGVTHYEM 330

Query: 222 ----RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
               +ID+I  S +         I        K SDH P+   + +
Sbjct: 331 LPIFQIDYIFTSKDF-------NILNYQIVKRKLSDHYPIWADVQL 369


>gi|302549548|ref|ZP_07301890.1| endonuclease/exonuclease/phosphatase [Streptomyces
           viridochromogenes DSM 40736]
 gi|302467166|gb|EFL30259.1| endonuclease/exonuclease/phosphatase [Streptomyces
           viridochromogenes DSM 40736]
          Length = 301

 Score = 64.4 bits (155), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 43/272 (15%), Positives = 85/272 (31%), Gaps = 39/272 (14%)

Query: 4   VTVATWNVNSIR------------ARIHNLAAWIKENNPDIICLQE-----TKTEDKNFP 46
           + V T+NV   R             R   +   ++   P +I  QE      +  +K+  
Sbjct: 44  LKVMTFNV---RFGTVVDRTPRWEVRRPVMRELLRRERPHVIGTQEGLYRQVRAIEKDL- 99

Query: 47  FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
                  +Y     G+   +    ++ +     +  L  D   +                
Sbjct: 100 -----GEHYDWIGTGRGGGSKDEFMAVFYDTRRLEPLEFDHFWLSGTPYAIASNTWGADW 154

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
                ++   +     +    ++     +   ++   +         +       D   P
Sbjct: 155 LRMVTWVRFADLAEGGREFYVLNTHLDSVSQYARERSVGLIGETIAGW-------DRSLP 207

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY-SFWDYYADSWSKNKGIRIDH 225
           +I   D        + +  + ++G  DA  A       Y ++  Y      +  G RID 
Sbjct: 208 VIVTGDFNAGAHDNRVYDLMLDIGLVDAWDAAASRGPAYGTYHGYRG---PRPGGRRIDW 264

Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257
           I+ +P  T+  H A ++T  R  T PSDH PV
Sbjct: 265 ILTTPGVTT--HWAGMNTFSRDGTYPSDHLPV 294


>gi|269926406|ref|YP_003323029.1| Endonuclease/exonuclease/phosphatase [Thermobaculum terrenum ATCC
           BAA-798]
 gi|269790066|gb|ACZ42207.1| Endonuclease/exonuclease/phosphatase [Thermobaculum terrenum ATCC
           BAA-798]
          Length = 271

 Score = 64.0 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/274 (14%), Positives = 80/274 (29%), Gaps = 30/274 (10%)

Query: 4   VTVATWNVNSI-----------RARIHNLAAWIKENNPDIICLQETKTEDKNFPF-ETLQ 51
           + V ++NV              RA ++     I  NNPD+I  QE   ++ N    + ++
Sbjct: 12  IRVMSFNVRGAVHKDGENAWDHRASLN--LRTILSNNPDLIGFQEV--QEGNLQKYQEMR 67

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
             + +I                ++  ++     G    +     +     +   +R+   
Sbjct: 68  DYDKYIGLQYGAREPWEYAAIYWKKDKLERINSGG-FWLNEDCTQMGLGWDAACIRVATW 126

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
            L          +               +              + I        P++   
Sbjct: 127 CLFEHKASGLRFFHFNTHLDHEGRTARVEG--------TKKLLSQIESIVPNRFPVLITG 178

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRA-THDTHHLYSFWDYYADSWSKNKGIRIDHIML-S 229
           D   T E       +        + A   +    ++F  +       + G RID I++  
Sbjct: 179 DFNCTPETEPYKLFMDAGFKDAYLEAGCMEDKEGFTF--HRFTGKPTHSG-RIDWILVRD 235

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             A   + S  +D        PSDH P+I  L +
Sbjct: 236 GNARWYIRSFHLDRTGEPPIFPSDHFPLIADLSL 269


>gi|294643627|ref|ZP_06721429.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           ovatus SD CC 2a]
 gi|294808046|ref|ZP_06766819.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           xylanisolvens SD CC 1b]
 gi|292641004|gb|EFF59220.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           ovatus SD CC 2a]
 gi|294444687|gb|EFG13381.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           xylanisolvens SD CC 1b]
          Length = 296

 Score = 64.0 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/266 (12%), Positives = 73/266 (27%), Gaps = 22/266 (8%)

Query: 3   VVTVATWNVN--------SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           ++ +A++N+         S   R++ L   ++ N  D+  +QE +T         L   +
Sbjct: 41  IIRLASYNIRTKGDKGDKSWEVRLNALVDVVRRNKFDMFAIQEGRTSQLK-DMMILNEYS 99

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           Y        +      +   +    V                  +    + +     +  
Sbjct: 100 YIGRDRDGDNKGEHCAIYYKKDRFKVLKHGDFWYSETPDIPSYGWGARCRRICTWGYFKD 159

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
                    ++          R  S  + LE+    A                       
Sbjct: 160 LRTGKKFYVFNSHTDHEATEARRQSSFMLLEQVRKIAKGR------PTFCTGDFNATPDE 213

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             +++      L +            +   Y++        +     RID I ++P+   
Sbjct: 214 EPIQLLLKDSLLLDSYKCTLTPPKGPSGSFYAY------DKTGKTAKRIDFIFVTPKIK- 266

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVS 260
           +L    ID   +     SDH PV+V 
Sbjct: 267 ILSYHTIDDDIKYNKYSSDHFPVMVE 292


>gi|271502601|ref|YP_003335627.1| endonuclease/exonuclease/phosphatase [Dickeya dadantii Ech586]
 gi|270346156|gb|ACZ78921.1| Endonuclease/exonuclease/phosphatase [Dickeya dadantii Ech586]
          Length = 287

 Score = 64.0 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 51/300 (17%), Positives = 94/300 (31%), Gaps = 56/300 (18%)

Query: 4   VTVATWNVN-SI----RARIHNLAAWIKENNPDIICLQET-----KTEDKNFPFETLQSL 53
           + + ++N+   +    R  +  +A  ++    DIIC+QE      ++   + P E    L
Sbjct: 1   MLIVSYNIQYGLGRDGRYDLARIADEVR--GADIICMQEVERFWQRSGMTDQPAELAALL 58

Query: 54  N-YHIETCGQKSYNGVAILSKYQPIEIVTHLPG----------------------DDLDV 90
             YH         +   +++  + +                                  +
Sbjct: 59  GEYHWVYGANLDMDASTVVADGRVLNRRRQFGTLTLSRRPILSSRNFPLPKFGTLTQHSI 118

Query: 91  QARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIF 150
           Q   +E     +   +R+ N +L H    T     D +  I               P   
Sbjct: 119 QQGVLETVVDTDGGAIRVYNTHLSHLCAETRLPQVDAMLGIFARAPEEGGAWCGGHPDPT 178

Query: 151 AG----DYNIIPQPHDCYNPIIWENDACFT-----LEVRQSFQKLQNMGFTDAIRATHDT 201
           AG       ++PQ       +    D+               + +++ G  DA  A    
Sbjct: 179 AGWTEGRMPVMPQEMILMGDLNCLPDSDEYRHLVGPVSPHHGRLVRHRGLMDAWVAAGQL 238

Query: 202 HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
                     + S   N G RIDH +L+P     +    +DT+ +G    SDH P+ V L
Sbjct: 239 ES--------SGSTHPNVGGRIDHCLLTPSLGVTVRRCWVDTENQG----SDHHPLWVEL 286


>gi|149195689|ref|ZP_01872746.1| hypothetical protein LNTAR_17393 [Lentisphaera araneosa HTCC2155]
 gi|149141151|gb|EDM29547.1| hypothetical protein LNTAR_17393 [Lentisphaera araneosa HTCC2155]
          Length = 286

 Score = 64.0 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 47/285 (16%), Positives = 79/285 (27%), Gaps = 44/285 (15%)

Query: 4   VTVATWNV-----NSIRARIHNLAA---WIKENNPDIICLQETKTEDKNFPFETLQSLNY 55
           V + T+NV     +       N+     W+K    D I LQE K  D N   +  ++  +
Sbjct: 19  VKIITYNVLYGFNHG-----KNIQEGQAWLKAQQADFIALQEMKGFDANKFAQLAKTWGH 73

Query: 56  -HIETCGQKSYNGVAILSKYQPIEIVTHLPGDD----------------LDVQARFIEAT 98
            H     +     +A  S++   E+     G                       R     
Sbjct: 74  EHSYFYKRPHGMPLAFSSRFPISEVEELHKGVKRGFLKLKCRGIDFIVLHMTSQRLSARR 133

Query: 99  FTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLE-LEEPLIFAGDYNII 157
             +N  +  I  L    G  I    ++       + L      LE +        + N  
Sbjct: 134 QELNYISPTISELLKKKGKVIVLGDFNSLSPRDMKHLSELDDLLEEMRNTPRKKPNLNDN 193

Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK 217
                               +  Q  + L    F   +        +            +
Sbjct: 194 NFDIGIMTAFEDLGLVELCHQQLQGQKDL-QGSFPSTLLEKIPNKEI-----------QE 241

Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
               RID I+    +   L  A I  +     K SDH P+I+ L+
Sbjct: 242 KYLRRIDFILSDAISAKNLSQAAIPKEG-DLEKISDHYPIIIELN 285


>gi|309366995|emb|CAP20464.2| hypothetical protein CBG_23668 [Caenorhabditis briggsae AF16]
          Length = 439

 Score = 64.0 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/305 (12%), Positives = 84/305 (27%), Gaps = 32/305 (10%)

Query: 4   VTVATWNVNSI----------RA-RIHNLAAWIKENNPDIICLQETKTEDK--NFPFETL 50
           + + T N   +          R  R+  +  +++    DI+ LQE  + +       +  
Sbjct: 43  LRIVTLNAWCLPQPWPIGSTDRVHRLQKIGEYMRNETYDIVGLQELWSYNDFVRLSEQVK 102

Query: 51  QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR--- 107
            +  Y        + +GV + S++  +  +T     +           F      L    
Sbjct: 103 DAYPYFHYFHSGFTGSGVCVFSRHPIVSTLTSRYSLNGFAHHIHRGDWFGGKVVGLTEVE 162

Query: 108 ---------IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP 158
                             +         + +      +F        + +I  GD N+ P
Sbjct: 163 IDGDLRVNFYTTHLHAEYDRENDLYLPHRTAQSFELAQFVRHTARGADVVIVTGDLNMEP 222

Query: 159 QPHDCY---NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW 215
                    +     +    + EV  +      +     I          + +   A   
Sbjct: 223 CDLGFRLILSHAKLFDAWRMSHEVETTDGDDGELLKFRGIAKGGTCDRPDNCYSKKAL-R 281

Query: 216 SKNKGIRIDHIML-SPEATSLLHSARI-DTKPRGWT-KPSDHTPVIVSLDIPEPRKKQQD 272
            K+   RID+++  S      L    I   +  G     SDH  +     I +  + ++ 
Sbjct: 282 EKDDSKRIDYMLFKSGRCNVKLEECEITLNQIPGEDLNYSDHVGLRARFTIDDRFRHEKS 341

Query: 273 STSQN 277
             +  
Sbjct: 342 INTWE 346


>gi|3248971|gb|AAD09945.1| unknown [Coxiella burnetii]
          Length = 50

 Score = 64.0 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 4/49 (8%)

Query: 214 SWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
           +W KN G RID+ +++ +  + + S RI    R     SDH P+I+  +
Sbjct: 1   AWEKNVGWRIDYQVITSDLKNSVKSERIYKDKR----FSDHAPLIIDYE 45


>gi|317032475|ref|XP_001394977.2| DNA lyase [Aspergillus niger CBS 513.88]
          Length = 555

 Score = 64.0 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/264 (12%), Positives = 63/264 (23%), Gaps = 26/264 (9%)

Query: 4   VTVATWNVNSIRA-------RIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55
           + + TWNVN IR        R      A       DI+  QETK + K+   + +    +
Sbjct: 3   LRITTWNVNGIRNPFSYEPWRGKRTFDAMFDILEADIVVFQETKIQRKDLRDDMVLVPGW 62

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
                   S   V        I             +          ++ + R        
Sbjct: 63  DCYF----SLPRVKKGYSGVVIYTRNATCAPIRAEEGLSGMLCPPNSSVSFRELPENQQI 118

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
           G   T  +                  +      +  G Y+   +     +      D   
Sbjct: 119 GGYPTIEQLSQLEVDAATLDSEGRCVILEFPAFVLLGIYSPANRDESRDSFRRSFIDLMD 178

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
                      +     D   +  +    ++       + +++    +D           
Sbjct: 179 ARIRNLVAMGKRVFVTGDLNISRGEIDAAHAGEAIRKGTLTEDD---LD-------MQEW 228

Query: 236 LHSARIDTKPRGWTKPSDHTPVIV 259
              + I     G    SDH PV  
Sbjct: 229 FCDSNIQEGLMG----SDHCPVYA 248


>gi|332176908|gb|AEE12598.1| Endonuclease/exonuclease/phosphatase [Porphyromonas asaccharolytica
           DSM 20707]
          Length = 390

 Score = 64.0 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 45/279 (16%), Positives = 75/279 (26%), Gaps = 37/279 (13%)

Query: 4   VTVATWNVNSIRARIHNLA-----------AWIKENNPDIICLQETKTEDKN-------- 44
           + V + N N         A            ++ E++ DIICLQE    D +        
Sbjct: 129 IKVVSLNAN-----AFQFAELGAHDQHPATDYLAESDADIICLQEAWLSDNDSKYMSERS 183

Query: 45  FPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
                     Y      +   + + +LSKY  +           +  A F          
Sbjct: 184 LHHTMQAYPYYSSAYAVKDHGSRLIVLSKYPILSTRPIDLHSKFNGGAVFTILVGEKKLV 243

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
              +               +        +    A         +  A     I Q  +  
Sbjct: 244 LYNLHLESFGFTKEEQKLYFQLAQEGNPKGFTQAVGGRFSPPFVRRAKQVEQIYQDVNYQ 303

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRID 224
                     F            + G  DAI  T      YS++      +    G+RID
Sbjct: 304 ESPYVLICGDFNDTPISYTHHRLSTGLHDAIATTG-RGTNYSYY------FKSLIGVRID 356

Query: 225 HIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           H++ S    +    A +D       + SDH P+I    +
Sbjct: 357 HMLYSDHIEARA--AYVDRTA----EISDHKPIICYFKL 389


>gi|159469496|ref|XP_001692899.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158277701|gb|EDP03468.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 1192

 Score = 64.0 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 33/74 (44%), Gaps = 4/74 (5%)

Query: 4  VTVATWNVNSIRARIHNL---AAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
          + + +WN+N ++  I        +++  N DI+CLQET+  D     E   +  +     
Sbjct: 3  LRIVSWNINGLKRVITIFGSLERFLRVLNADIVCLQETQLRDG-LEPELAVAPGWDSYFG 61

Query: 61 GQKSYNGVAILSKY 74
            +  +G +  + +
Sbjct: 62 FTRCRSGYSGTATF 75


>gi|82915173|ref|XP_728992.1| glutamate dehydrogenase [Plasmodium yoelii yoelii str. 17XNL]
 gi|23485755|gb|EAA20557.1| glutamate dehydrogenase [Plasmodium yoelii yoelii]
          Length = 1203

 Score = 64.0 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 32/78 (41%), Gaps = 11/78 (14%)

Query: 1  MSVVTVATWNVNSIRA----RIHN---LAAWIKENNPDIICLQETKTEDKNFPFET---- 49
          M  + + +WNVN  +        N   + +++++ + DI+CLQETKT D    +E     
Sbjct: 1  MEKLHIVSWNVNGWKKSCEIIKKNGMSIESFLEKLDIDILCLQETKTNDDVIEYEPNVLN 60

Query: 50 LQSLNYHIETCGQKSYNG 67
            S  Y            
Sbjct: 61 AHSDKYETYWNCCIKKEN 78



 Score = 43.2 bits (100), Expect = 0.039,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 28/69 (40%), Gaps = 11/69 (15%)

Query: 198 THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL-LHSARIDTKPRGWTKPSDHTP 256
             D +  ++ WD Y  +   N+G RID+I +      + +                  +P
Sbjct: 485 YPDMNGKFTCWDTYKQNRLTNEGSRIDYIFIDNILFEMFIKKYNYLYD----------SP 534

Query: 257 VIVSLDIPE 265
           +I++ ++ E
Sbjct: 535 IILTKELQE 543


>gi|68235756|gb|AAY88216.1| endonuclease/reverse transcriptase [Rattus norvegicus]
          Length = 1275

 Score = 64.0 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 47/251 (18%), Positives = 76/251 (30%), Gaps = 32/251 (12%)

Query: 6   VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + N+N + + I    L  WI+  +P   CLQET   DK+  +  ++      +  GQK
Sbjct: 12  LISLNINGLNSPIKRHRLTNWIRNEDPAFCCLQETHLRDKDRHYLRVKGWKTTFQANGQK 71

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
              GVAIL   +                 +            + I          I +  
Sbjct: 72  KQAGVAILISNKINF--------------QLKVIKKDKEGHFIFIKGKIHQDELSILNIY 117

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
             +  +           +  +    I  GD+N      D        +D     EV    
Sbjct: 118 APNTRAPTYVKETLLKLKTHIAPHTIIVGDFNTPLSSMDRSWKQKLNSDVDRLREVMSQM 177

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
                   TD  R  +     Y+F+     ++SK     IDHI+      +      I  
Sbjct: 178 ------DLTDIYRTFYPKAKGYTFFSAPHGTFSK-----IDHIIGQKTGLNRYRKIEIIP 226

Query: 244 KPRGWTKPSDH 254
                   SDH
Sbjct: 227 CVL-----SDH 232


>gi|265767350|ref|ZP_06095016.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|263252655|gb|EEZ24167.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
          Length = 365

 Score = 64.0 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/282 (14%), Positives = 82/282 (29%), Gaps = 33/282 (11%)

Query: 2   SVVTVATWNVNSI-RARIHN----LAAWIKENNPDIICLQE--------TKTEDKNFPFE 48
           + + + ++N+ S    +  N    +  +IK +N DI+C+QE            +K    +
Sbjct: 99  NSIKLLSYNIMSFGNMKKENGQNPILNYIKNSNADIVCMQEYAGSETAKIHLSNKEI-RQ 157

Query: 49  TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108
            L+   +H      K+  G  +    +   +   +     +     +          L I
Sbjct: 158 ALKDYPHHNIKQVGKTGAGSQLACYSKFPILSARMLDYRSNYNGSMVYEIKIGKDTVLLI 217

Query: 109 GNLY-----LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
            N             +      D  +   +           E   I +     I Q    
Sbjct: 218 NNHLESNKLTREDKVVYEDMLKDPKAGKVKSGVRQLVNKLAEASAIRSAQARTIAQEIAH 277

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223
                      F         ++ +    DA   +     +     Y  + +      RI
Sbjct: 278 SPYPSVIVCGDFNDSPISYAHRVISQDMDDAFTESGCGLGI----SYNQNKFY----FRI 329

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           D+I++S           +D       K SDH P+   + +P+
Sbjct: 330 DNILVSKNL--KASGCTVDNSI----KDSDHYPIWCYITLPD 365


>gi|68235759|gb|AAY88218.1| endonuclease/reverse transcriptase [Rattus norvegicus]
          Length = 1275

 Score = 64.0 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 47/251 (18%), Positives = 76/251 (30%), Gaps = 32/251 (12%)

Query: 6   VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + N+N + + I    L  WI+  +P   CLQET   DK+  +  ++      +  GQK
Sbjct: 12  LISLNINGLNSPIKRHRLTNWIRNEDPAFCCLQETHLRDKDRHYLRVKGWKTIFQANGQK 71

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
              GVAIL   +                 +            + I          I +  
Sbjct: 72  KQAGVAILISNKINF--------------QLKVIKKDKEGHFIFIKGKIHQDELSILNIY 117

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
             +  +           +  +    I  GD+N      D        +D     EV    
Sbjct: 118 APNTRAPTYIKETLLKLKTHIAPHSIIVGDFNTPLSSMDRSWKQKLNSDVDRLREVMSQM 177

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
                   TD  R  +     Y+F+     ++SK     IDHI+      +      I  
Sbjct: 178 ------DLTDIYRTFYPKAKGYTFFSAPHGTFSK-----IDHIIGQKTGLNRYRKIEIIP 226

Query: 244 KPRGWTKPSDH 254
                   SDH
Sbjct: 227 CVL-----SDH 232


>gi|330466603|ref|YP_004404346.1| endonuclease/exonuclease/phosphatase [Verrucosispora maris
           AB-18-032]
 gi|328809574|gb|AEB43746.1| endonuclease/exonuclease/phosphatase [Verrucosispora maris
           AB-18-032]
          Length = 257

 Score = 64.0 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 78/259 (30%), Gaps = 21/259 (8%)

Query: 3   VVTVATWNV-NSIRA-----RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS-LNY 55
           ++ V TWNV N  R      R   L   I +  PD++ LQE +            + L  
Sbjct: 1   MLRVLTWNVRNGGRDSGGPDRRDALLRVIAQTRPDVLALQELR----GLDVTAFAARLGL 56

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
                G      VA+L +     +            A+ +         T+   + Y   
Sbjct: 57  RPYVAGSWFGQPVAVLVRPTWPVLAAAPVRRPFHHGAQRVTIGTDAGPLTVLSTHFYPYS 116

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
           G            +  +     A    +L     +A     I +  + Y           
Sbjct: 117 GRRRLIEAGWAAAALRRARGGLALLAGDLNTLDPYAEHAEQIARLPETYRRRH-LRRDGR 175

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
           T + R   + L          A       Y      A +   +  +R+D+++ +P   + 
Sbjct: 176 TPDTRAVARLLAAGLVDLGAAAGPTVPTGY------AGAEFSD--MRLDYLLATPALATH 227

Query: 236 LHSARIDTKPRGWTKPSDH 254
           L +  +   P+   + SDH
Sbjct: 228 LLTVDVLRTPQ-THQASDH 245


>gi|257093975|ref|YP_003167616.1| Endonuclease/exonuclease/phosphatase [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257046499|gb|ACV35687.1| Endonuclease/exonuclease/phosphatase [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 294

 Score = 64.0 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 43/283 (15%), Positives = 84/283 (29%), Gaps = 27/283 (9%)

Query: 4   VTVATWNVN----SIRAR--IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57
           + VAT+N++     IR R  IH++   ++  + DI+ LQE   +D+N          Y  
Sbjct: 3   LRVATYNIHKGVTGIRGRPRIHDVRLALEAIDADIVFLQEV--QDRN--ERLAHHPGYPF 58

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPG-------DDLDVQARFIEATFTINTQTLRIGN 110
            T      +G      Y    +  H            +   A    +   +  + L    
Sbjct: 59  GTQLDFLASGAYAHRAYGMNAVYPHGHHGNAILSRHRITESANHDISDHALEKRGLLHAV 118

Query: 111 LYLPHGN----PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
             L  G      +             R   F +  ++ E P                   
Sbjct: 119 TRLGRGRGREVHLICVHLGLIKRSRVRQATFLADFVQREVPASAPLIIAGDFNDWQQRVD 178

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226
            +  +          +       G  D + +        S       S++    + +D I
Sbjct: 179 GLLRDRLGVQEVAVAATSPPPEGGLLDRLLSWRPASDAQSGVSRTFPSFA--PWLTLDRI 236

Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKK 269
            +       +   ++  +   W + SDH P+I  L++   R +
Sbjct: 237 YV-RGF--RVLDMQV-PQGLAWARCSDHAPLIAELELDAVRPR 275


>gi|225453658|ref|XP_002268290.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 232

 Score = 64.0 bits (154), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/262 (11%), Positives = 69/262 (26%), Gaps = 33/262 (12%)

Query: 1   MSVVTVATWNVNSIR-ARIHNLAA-WIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           M+ + + +WNV  +  +R   +    I++   D+ C+QETK +                 
Sbjct: 1   MN-LKLLSWNVRGVNESRKRKVIKSVIRKQKVDLFCIQETKIQ----------------- 42

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
                    V              L                 +      +G   L     
Sbjct: 43  ----IMTERVVRSLGTGRFLEWKVLNACGSAGGILICWDKRVLELLEWEVGQFSLSCRFR 98

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
                     + +        +    EE     G +         +N  + + +      
Sbjct: 99  TMENGVIWAFTGVYGPFTRLEREWLWEEVGAIRGIWEGPWCLGGDFNITLAQGERNRQGR 158

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           +  + ++   +     +         +++        +     R+D  ++SP        
Sbjct: 159 ITSAMRRFAEVVDDLGLVDLQMQGGAFTW----TGGLNNMSRARLDIFLVSPCWLDQFSR 214

Query: 239 ARIDTKPRGWTKP-SDHTPVIV 259
                  R   +P SDH PV++
Sbjct: 215 VS----QRRLPRPISDHFPVLL 232


>gi|296123488|ref|YP_003631266.1| endonuclease/exonuclease/phosphatase [Planctomyces limnophilus DSM
           3776]
 gi|296015828|gb|ADG69067.1| Endonuclease/exonuclease/phosphatase [Planctomyces limnophilus DSM
           3776]
          Length = 253

 Score = 63.7 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/277 (12%), Positives = 68/277 (24%), Gaps = 62/277 (22%)

Query: 4   VTVATWNVN-SI-----RARIHNLAAWIKENNPDIICLQET-------------KTEDKN 44
           + + ++N++  I     R R+  +   ++   PD+ICLQE              K   + 
Sbjct: 1   MRIVSFNIHKGIGGRDRRYRLERIIEALRALEPDVICLQEVDHHVARSRYDHQAKLISEA 60

Query: 45  FPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
                L   +Y +    ++   G  I S+Y    +                         
Sbjct: 61  L---GLVHAHYQLNVRLKEGGYGNLIASRYPLASVHAISLTRRHYKPRGAQLVVVQTPLG 117

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
            L + + +L         +                  + + +   +       P      
Sbjct: 118 RLHLIHWHLGLRETERHWQVRRMFEHQHFREHRQLPAIAIGDTNDWRNTLANGPF----- 172

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRID 224
                         V    Q         +  A                         +D
Sbjct: 173 -------------AVHGWKQISSPPSRFRSFPAWLPLGA-------------------LD 200

Query: 225 HIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
            + ++      + S  I    R     SDH P++V L
Sbjct: 201 KVFVNSGVA--IESCHIAKS-RLLRDASDHLPLVVDL 234


>gi|293376548|ref|ZP_06622776.1| endonuclease/exonuclease/phosphatase family protein [Turicibacter
           sanguinis PC909]
 gi|325839350|ref|ZP_08166789.1| endonuclease/exonuclease/phosphatase family protein [Turicibacter
           sp. HGF1]
 gi|292644774|gb|EFF62856.1| endonuclease/exonuclease/phosphatase family protein [Turicibacter
           sanguinis PC909]
 gi|325490470|gb|EGC92786.1| endonuclease/exonuclease/phosphatase family protein [Turicibacter
           sp. HGF1]
          Length = 260

 Score = 63.7 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 40/278 (14%), Positives = 72/278 (25%), Gaps = 47/278 (16%)

Query: 4   VTVATWNVNSIRA------------RIHNLAAWIKENNPDIICLQET-----KTEDKNFP 46
           + V T+N   +R+            R H +   IK+ N DII LQE      K  ++   
Sbjct: 1   MKVMTFN---LRSDSIFDGKNRWHKRNHIVFDVIKKYNCDIIGLQEVTNKMYKDIEEQL- 56

Query: 47  FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
                      +              ++  I I       + +      +     ++   
Sbjct: 57  ----------SDYYIIGQPRCKRFFVEHNNILISKRHEILEEETFWLSNQPKKVGSSIWY 106

Query: 107 RIGNLYLPHGNPITS-----TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161
            +                    Y+  +       R    +   E          I     
Sbjct: 107 SVFPRICTTAKVRLDSGELVRIYNTHLDVYLSPARGYGLKKISEYIERQQEIDQIPVVLM 166

Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI 221
             +N            E   S ++   +   D       T   +             KG+
Sbjct: 167 GDFNATPNHRIIKTFTEGELSHKRFVAVQEYDKSIYNKPTMGRF---------KDSEKGM 217

Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
            +D+I +S E    +  A I         PSDH P++ 
Sbjct: 218 HLDYIFVSEECA--VLHAEIIKDNVNGQYPSDHYPLLA 253


>gi|255530372|ref|YP_003090744.1| endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM
           2366]
 gi|255343356|gb|ACU02682.1| Endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM
           2366]
          Length = 303

 Score = 63.7 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 71/252 (28%), Gaps = 14/252 (5%)

Query: 13  SIRARIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYHIETCGQKSYNGVAIL 71
               R    AA + +  PDIIC+QE  + ++++          Y          +     
Sbjct: 59  GWNGRKEICAAIMLQQKPDIICMQEVLRNQNEDLKKALK---GYFSFGFEGPEMDAFTTG 115

Query: 72  SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWI 131
                  I  +                + ++   L  G+L         +     K    
Sbjct: 116 YH----GIAKNPIFFSEKRYELLSAGGYWLSETPLMAGSLSWDSARARNANWVRLKDRQS 171

Query: 132 KRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE---NDACFTLEVRQSFQKLQN 188
            +  R  +  L+ +          ++      Y     +    D   + E +     +  
Sbjct: 172 GKDFRVVNLHLDHKSQPAREKQMEMVLADAAQYPRDYPQLLAGDFNASAENKVYELVISA 231

Query: 189 MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGW 248
                      +    Y+   +  +++SK KG +ID I    E T    SA I       
Sbjct: 232 KWKDIYTTLHGEAEPGYTVHQFQGENYSK-KGKKIDFIFCKGEVT--AQSAGILKDNVKG 288

Query: 249 TKPSDHTPVIVS 260
             PSDH  V   
Sbjct: 289 KYPSDHYFVSAE 300


>gi|294931921|ref|XP_002780053.1| ap endonuclease, putative [Perkinsus marinus ATCC 50983]
 gi|239889897|gb|EER11848.1| ap endonuclease, putative [Perkinsus marinus ATCC 50983]
          Length = 101

 Score = 63.7 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 41/106 (38%), Gaps = 9/106 (8%)

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDH 225
           +          E     +   + GFTD     H      +S+W   A    +N+G+R+D+
Sbjct: 1   MPIWFTGTTNEERESFREHYTSKGFTDTFAHMHPHATGCFSYWSVRARDKPRNRGLRLDY 60

Query: 226 IMLSPEA-TSLLHSARIDTK--PRGWTKPSDHTPVIVSLDIPEPRK 268
           ++ +P      +  A I     P G      H PV V+ + P  R+
Sbjct: 61  VISAPGFPIDRIEDAFILEDFAPHGN-----HCPVGVTFERPLKRQ 101


>gi|298373308|ref|ZP_06983297.1| AP endonuclease domain-containing protein [Bacteroidetes oral taxon
           274 str. F0058]
 gi|298274360|gb|EFI15912.1| AP endonuclease domain-containing protein [Bacteroidetes oral taxon
           274 str. F0058]
          Length = 370

 Score = 63.7 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 38/261 (14%), Positives = 76/261 (29%), Gaps = 17/261 (6%)

Query: 4   VTVATWNVNSIRARIH--NLAAWIKENNPDIICLQE----TKTEDKNFPFETLQSLNYHI 57
           + + ++N++S+ +         +I   + DI+C QE                 ++  Y  
Sbjct: 112 IKLLSYNISSLGSVRDFDQFMGFIDSIDADIVCFQEFGYYVH-HKDRLKKAMEKNYPYSH 170

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
                +S N    ++ +    ++     +        I +   I   T+R+ N +L    
Sbjct: 171 IWYKNQSRNYSWGVATFSKHPVINKKKIEYSSRYNVSIYSDIDIGDDTIRVINNHLESNK 230

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
              +     +           +  L                +           + + +  
Sbjct: 231 FTLADIRQYR---TLDNDLSGNNILNTSSLFSRKLGEAYKIRATQAAMVRATIDSSPYKS 287

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
            V   F  +        I+         + W Y     S    + IDHI++      L  
Sbjct: 288 VVCGDFNDVTESYAYSKIKDGLTDLFTATAWGYRYSFRSNYMLVGIDHILIDHRLIPL-- 345

Query: 238 SARIDTKPRGWTKPSDHTPVI 258
           S  ID K       SDH P+I
Sbjct: 346 SLTIDRK-----NYSDHYPLI 361


>gi|225443954|ref|XP_002272288.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 1551

 Score = 63.7 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/261 (13%), Positives = 76/261 (29%), Gaps = 32/261 (12%)

Query: 4   VTV--ATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           +     TWNV           + A IK++  D++CLQETK ++       + SL      
Sbjct: 1   MKFRMLTWNVRGANNCDKRKVIKALIKKHKVDLVCLQETKIQE--MSKGIICSLG----V 54

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
                +  V        I +                         ++         G   
Sbjct: 55  GRYLDWGAVDSRGAAGGIVV--------FWDNRVLELVDIHKGGCSISCIFKNSEDG--- 103

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
               +    + +   +    +    EE     G +N        +N I+   +      +
Sbjct: 104 ----FMWMFTGVYGPILRRERESFWEELGAIKGLWNGPWCAAGDFNAILSPEERNRGGRL 159

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
             + ++   +     ++        +++    +   +     R+D  +++    +     
Sbjct: 160 NSNMRRFVEIIEDLELKDVPLVGGPFTW----SGGVNNQSFSRLDRFLINEGWDNHFGDV 215

Query: 240 RIDTKPRGWTKPSDHTPVIVS 260
           R    PR     SDH PV++ 
Sbjct: 216 RQCVLPR---PVSDHFPVLLD 233


>gi|255036167|ref|YP_003086788.1| Endonuclease/exonuclease/phosphatase [Dyadobacter fermentans DSM
           18053]
 gi|254948923|gb|ACT93623.1| Endonuclease/exonuclease/phosphatase [Dyadobacter fermentans DSM
           18053]
          Length = 280

 Score = 63.7 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 38/278 (13%), Positives = 76/278 (27%), Gaps = 38/278 (13%)

Query: 2   SVVTVATWNV------NSIRA---RIHNLAAWIKENNPDIICLQETKTEDKNF----PFE 48
           + + VA++N+      + + A   R  N+   I+ +  DI  +QE               
Sbjct: 24  ATINVASYNLRYNTPNDGVNAWPNRKENVKGLIRFHEFDIFGVQE--ALVGQLKDVAELP 81

Query: 49  TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR---FIEATFTINTQT 105
                    +   +   +      K +   + +               +           
Sbjct: 82  EFAYYGKGRDDGKEGGEHSAIFYKKDRFKLLKSGDFWLSETPDKPGLGWDATCCNRICSW 141

Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165
            +  +L         +  +D +    +R       +   E                    
Sbjct: 142 AQFEDLKTKKKFFFFNVHFDHQGVEARRQSGHLMVKKIKEIAGNSTAIL----------- 190

Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225
                 D   T E  Q       +  T  +          +F  +  D+  K    RID+
Sbjct: 191 ----TGDFNSTPETEQIKTLGAALNDTHDVTKQAPYGPEGTFNSFKFDAPMK---ARIDY 243

Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           I +S      +    + T  +    PSDH PV+V ++I
Sbjct: 244 IFVSKNVD--VLKYGVLTDSKEQRYPSDHQPVLVKIEI 279


>gi|293355456|ref|XP_002728697.1| PREDICTED: LRRG00135-like [Rattus norvegicus]
          Length = 1275

 Score = 63.7 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 47/251 (18%), Positives = 76/251 (30%), Gaps = 32/251 (12%)

Query: 6   VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + N+N + + I    L  WI+  +P   CLQET   DK+  +  ++      +  GQK
Sbjct: 12  LISLNINGLNSPIKRHRLTNWIRNEDPAFCCLQETHLRDKDRHYLRVKGWKTTFQANGQK 71

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
              GVAIL   +                 +            + I          I +  
Sbjct: 72  KQAGVAILISNKINF--------------QLKVIKKDKEGHFIFIKGKINQDELSILNIY 117

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
             +  +           +  +    I  GD+N      D        +D     EV    
Sbjct: 118 APNTRAPTYVKETLLKLKTHIAPHTIIVGDFNTPLSSMDRSWKQKLNSDVDRLREVMSQM 177

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
                   TD  R  +     Y+F+     ++SK     IDHI+      +      I  
Sbjct: 178 ------DLTDIYRTFYPKAKGYTFFSAPHGTFSK-----IDHIIGQKTGLNRYRKIEIIP 226

Query: 244 KPRGWTKPSDH 254
                   SDH
Sbjct: 227 CVL-----SDH 232


>gi|313886230|ref|ZP_07819959.1| endonuclease/exonuclease/phosphatase family protein [Porphyromonas
           asaccharolytica PR426713P-I]
 gi|312924301|gb|EFR35081.1| endonuclease/exonuclease/phosphatase family protein [Porphyromonas
           asaccharolytica PR426713P-I]
          Length = 390

 Score = 63.7 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 45/279 (16%), Positives = 75/279 (26%), Gaps = 37/279 (13%)

Query: 4   VTVATWNVNSIRARIHNLA-----------AWIKENNPDIICLQETKTEDKN-------- 44
           + V + N N         A            ++ E++ DIICLQE    D +        
Sbjct: 129 IKVVSLNAN-----AFQFAELGAHDQHPATDYLAESDADIICLQEAWLSDNDSKYMSERS 183

Query: 45  FPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
                     Y      +   + + +LSKY  +           +  A F          
Sbjct: 184 LHHTMQAYPYYSSAYAVKDHGSRLIVLSKYPILSTRPIDLHSKFNGGAVFTILVGEKKLV 243

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
              +               +        +    A         +  A     I Q  +  
Sbjct: 244 LYNLHLESFGFTKEEQKLYFQLAQEGNPKGFTQAVGGRFSPPFVRRAKQVEQIYQDVNYQ 303

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRID 224
                     F            + G  DAI  T      YS++      +    G+RID
Sbjct: 304 ESPYVLICGDFNDTPISYTHHRLSTGLHDAIATTG-RGVNYSYY------FKSLIGVRID 356

Query: 225 HIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           H++ S    +    A +D       + SDH P+I    +
Sbjct: 357 HMLYSDHIEARA--AYVDRTA----EISDHKPIICYFKL 389


>gi|225435512|ref|XP_002282995.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 1013

 Score = 63.7 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/259 (13%), Positives = 78/259 (30%), Gaps = 30/259 (11%)

Query: 4   VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + +WNV           + A IK+N  D++CLQETK ++       ++S+        
Sbjct: 3   IRILSWNVKGANNCDKRKVIKALIKKNKVDLVCLQETKIQE--MTRGLIRSIG----VGR 56

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
              +  V        I +       ++    +  E + + + +    G  +   G    +
Sbjct: 57  FLDWGTVDSRGSAGGIVVFWDNRVLEMIELEK-GECSISCHFKNCEDGFTWTFTGVYGPT 115

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            + + +  W +                 F    +   +             A    E++ 
Sbjct: 116 KRRERESLWNELGAIHGLWNGPWCVAGDFNAILSPEERSRGGSFNSDMRRFADVIEELQL 175

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
               L                  +++    +   +     R+D  +++         +R 
Sbjct: 176 KDLPLF--------------GGPFTW----SGGANNQTLSRLDRFLVNEGWDCRFSHSRQ 217

Query: 242 DTKPRGWTKPSDHTPVIVS 260
              PR     SDH P+++ 
Sbjct: 218 SVLPR---PVSDHFPILLE 233


>gi|325106148|ref|YP_004275802.1| Endonuclease/exonuclease/phosphatase [Pedobacter saltans DSM 12145]
 gi|324974996|gb|ADY53980.1| Endonuclease/exonuclease/phosphatase [Pedobacter saltans DSM 12145]
          Length = 372

 Score = 63.7 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 40/274 (14%), Positives = 77/274 (28%), Gaps = 25/274 (9%)

Query: 2   SVVTVATWNVNSIRA--------RIHNLAAWIKENNPDIICLQE--T----KTEDKNFPF 47
           S V + T+NV+  +           +N+   I E  PD+I +QE  T    K + +N   
Sbjct: 104 SSVRLMTYNVHHFKQFGSEVDSNARNNILDLINEEQPDVIAIQEFLTRKKGKLKSENNIR 163

Query: 48  ETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGD-DLDVQARFIEATFTINTQTL 106
           + L + +Y+  +     Y  + I    +   +      + D       +      N +  
Sbjct: 164 KILGTEDYYFYSTSGNDYESMGIAIFSKLPIVNKGKLTELDPKGSNNGLWIDVKKNNKVF 223

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
           RI  ++L          Y  K     +      +        + +       Q     + 
Sbjct: 224 RIYTIHLASIAFAPVDYYYFKRISNMKTEDEDIKHGRRILSRLKSAFVRRAKQVEILKSY 283

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226
                     +          ++                     Y   +   +   ID+I
Sbjct: 284 TDSCKTPFVIMGDFNDTPVSYSVNQISKDLKNSFIEKGVGIGRTYNGDFPNFQ---IDYI 340

Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
           + + +         I T        SDH PV V 
Sbjct: 341 LTTKDF-------DIHTYKIIKKAYSDHYPVRVD 367


>gi|260827819|ref|XP_002608861.1| hypothetical protein BRAFLDRAFT_102054 [Branchiostoma floridae]
 gi|229294215|gb|EEN64871.1| hypothetical protein BRAFLDRAFT_102054 [Branchiostoma floridae]
          Length = 537

 Score = 63.7 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 44/285 (15%), Positives = 84/285 (29%), Gaps = 42/285 (14%)

Query: 4   VTVATWNV---NS-----IRA---RIHNLAAWIKENNPDIICLQETK--------TEDKN 44
           + +A++NV   N      ++A   R  +L   + +   DII LQE +             
Sbjct: 246 LKIASYNVWNFNGGPEGRVKAYVERAQHLGQVLADCAADIIALQEVRFAYNRGGPLGPNQ 305

Query: 45  FPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
               T     Y        SY    +    + + I++  P    D    +  A+ + +  
Sbjct: 306 IQHFTHYLPGYQYVFQPAMSYPESILGRVEEGVAIISKFPIITHDYILLYRNASDSEDFH 365

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
             RI          +           +    +  S     E    F+G   ++   +   
Sbjct: 366 Q-RICLHAEIETPYLGLVHLFVTHLSLSEPAQDKSVVQIWEFMQRFSGPAVLMGDLNTEP 424

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI--- 221
                          R   ++LQ+           D     ++W     +  ++ G+   
Sbjct: 425 GSKAIRFLQGVEEIDRVKTEELQDAWLMKYPEPRADRDG--TYW----RNEIRDSGLTFN 478

Query: 222 --------RIDHIMLSPEATSLLHSARI---DTKPRGWTKPSDHT 255
                   RID++ +     S +    I   D   RG+   SDH 
Sbjct: 479 ALKSHLEKRIDYMFV--RLPSDVRLHNISLLDDGKRGYAAASDHV 521


>gi|255011457|ref|ZP_05283583.1| hypothetical protein Bfra3_20100 [Bacteroides fragilis 3_1_12]
 gi|313149275|ref|ZP_07811468.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313138042|gb|EFR55402.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 365

 Score = 63.7 bits (153), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/278 (13%), Positives = 80/278 (28%), Gaps = 25/278 (8%)

Query: 2   SVVTVATWNVNSI-RARIHN----LAAWIKENNPDIICLQE--------TKTEDKNFPFE 48
           + + + ++N+ S    +  N    +  +IK +  DI+C+QE            +K    +
Sbjct: 99  NSIKLLSYNIMSFGNMKKENGQNPILNYIKNSKADIVCMQEYAGSETAKIHLNNKEI-RQ 157

Query: 49  TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108
            L+   Y       K+  G  I    +   +   +     +     +          L I
Sbjct: 158 ALKDYPYRHIKQVGKTGAGSQIACYSKFPILSARMLDYQSNYNGSMVYDIKIGKDTVLLI 217

Query: 109 GNL-YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167
            N              Y+D +   K     +  R  + +    +   +   +        
Sbjct: 218 NNHLESNKLTREDKVVYEDMLKDPKAGKVKSGIRQLVNKLAEASAIRSAQARAIAQEIAR 277

Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227
                     +   S     +   +  +              Y  + +      RID+I+
Sbjct: 278 SPYPSVIVCGDFNDSPISYAHRVISQDLDDAFTESGRGLGISYNQNKFY----FRIDNIL 333

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           +S           +D       K SDH P+   + +P+
Sbjct: 334 ISKNL--KASGCTVDNSI----KDSDHYPIWCYITLPD 365


>gi|39652288|dbj|BAD04858.1| reverse transcriptase [Tetraodon nigroviridis]
          Length = 1119

 Score = 63.3 bits (152), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/265 (12%), Positives = 78/265 (29%), Gaps = 31/265 (11%)

Query: 3   VVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
            +T++T NV S+++R+    + +++     D+  +QE            L  L  +    
Sbjct: 2   TLTISTINVRSVKSRVRAQSVLSFLNSFKSDVFLIQEC----------GLPFLKQYRHWE 51

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
                  +   S     +    +     + Q     +T   + + L     ++     + 
Sbjct: 52  EMWPQTSIWSGSNNNRND---GVAILIKNPQVLVKGSTVVRDGRALLAQLTFMGQDFNLL 108

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
           +    ++ +     L      +  + PL+  GD+N I       +      D        
Sbjct: 109 NIYGFNEKNDRYDLLEDLQSHMLGKVPLVVGGDFNCIL---SRKDRRGAGEDFKVDKTSV 165

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
                 ++    D  +  H     ++++          +  RID+               
Sbjct: 166 LLQGICRDFKLQDCFKTMHPREEGFTWFSGDGT-----RASRIDYTFT--------RDCP 212

Query: 241 IDTKPRGWTKPSDHTPVIVSLDIPE 265
           I          SDH  +  +L +  
Sbjct: 213 ISDARLTPVFFSDHLMLSCTLSLSS 237


>gi|156101950|ref|XP_001616668.1| exodeoxyribonuclease III [Plasmodium vivax SaI-1]
 gi|148805542|gb|EDL46941.1| exodeoxyribonuclease III, putative [Plasmodium vivax]
          Length = 798

 Score = 63.3 bits (152), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 41/110 (37%), Gaps = 11/110 (10%)

Query: 1   MSVVTVATWNVNS-------IRARIHNLAAWIKENNPDIICLQETKTEDK----NFPFET 49
           M  + +A+WNVN        I+ R   +A ++ + + DI+CLQETKT D     +F    
Sbjct: 1   MESLQIASWNVNGWKKSCELIKHREVTVAQFLSKLHIDILCLQETKTNDSIIENDFRLLD 60

Query: 50  LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF 99
             S  Y       K   G  I   Y  +          +   +      F
Sbjct: 61  AYSDEYETYWTCCKKRGGEKIQKGYSGLATYVGHKAKVICCCSDPFRNFF 110



 Score = 45.2 bits (105), Expect = 0.012,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 28/77 (36%), Gaps = 14/77 (18%)

Query: 187 QNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKP 245
                 D     + + +  ++ WD Y      N+G RID+I +     + L         
Sbjct: 532 CEDRMVDTFSFFYPSLNGKFTCWDTYKQHRISNEGSRIDYIFVDYVLYARL--------I 583

Query: 246 RGWT--KPSDHTPVIVS 260
           RG      S   PV+++
Sbjct: 584 RGHPHLYAS---PVVLT 597


>gi|299142059|ref|ZP_07035193.1| AP endonuclease domain protein [Prevotella oris C735]
 gi|298576521|gb|EFI48393.1| AP endonuclease domain protein [Prevotella oris C735]
          Length = 368

 Score = 63.3 bits (152), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 38/267 (14%), Positives = 74/267 (27%), Gaps = 23/267 (8%)

Query: 4   VTVATWNVNSIRARIHN------LAAWIKENNPDIICLQETKTED-KNFPFETLQSLNYH 56
           + V ++NV S      +      +  +I+E  PDI+CLQE  T +      +++ +  Y 
Sbjct: 106 IKVMSYNVWSFAGWERHADGKFPILEYIREQQPDILCLQEAMTNEIGQARVDSVLNKIYA 165

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
            +   + S +   I        +                      N   + + N     G
Sbjct: 166 YKDTMKFSPSSDCIALYSHYPIVSHERIVYPSRGNLSGAFEIKIGNDTVIVVNNHLETTG 225

Query: 117 --NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
             N             +       +    +++    +    +       Y     +    
Sbjct: 226 LSNEDKREFKSMVKGNLLTSDAKQASYRLIDKLGEASAKRAVQADAVARYISKHSDRSMI 285

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI--RIDHIMLSPEA 232
              +   S            +              Y+      N G+  RIDHIM S + 
Sbjct: 286 VCGDFNDSPISYARHTIAKGLTDCFIATGNGLGVSYH------NGGMYVRIDHIMCSKDW 339

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIV 259
                  ++D         SDH P++ 
Sbjct: 340 QPY--GCKVDRSI----GESDHYPILC 360


>gi|291515610|emb|CBK64820.1| Metal-dependent hydrolase [Alistipes shahii WAL 8301]
          Length = 380

 Score = 63.3 bits (152), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 44/264 (16%), Positives = 78/264 (29%), Gaps = 18/264 (6%)

Query: 4   VTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQETKTE-DKNFPFETLQSLNYHI 57
           V V ++NV S      R+ + ++   I+E  PD+ICLQE      +     +L    Y I
Sbjct: 125 VKVMSYNVRSFYGEDGRSSVDDILRLIEEQAPDLICLQEFNARLAEQSEEFSLLGEKYEI 184

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
              G+         S    +     L  D +   +  + A   +   T+R+ N +L    
Sbjct: 185 AHFGRTQAPDSVYGSTLTILSKYRILRSDTVLTPSSSVWADVIVGEDTVRVFNNHLRSTA 244

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
              S                 ++   +   L                             
Sbjct: 245 INASDNQFITSHQFLSDTARETKIRSIVTRLRENSVLRAAQVDSIAQVVGATRTRRIVCG 304

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
           +   +            +R         S + +    +     +RID+++ S     L  
Sbjct: 305 DFNDTPMSYVYRTMARGLRDAFRECG--SGYSHTFRGFYNT--LRIDYVL-SGGFEPL-- 357

Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261
           S  +          SDH PV+V L
Sbjct: 358 SYEVLP-----VDYSDHHPVVVRL 376


>gi|146318326|ref|YP_001198038.1| putative 3'-exo-deoxyribonuclease [Streptococcus suis 05ZYH33]
 gi|145689132|gb|ABP89638.1| putative 3'-exo-deoxyribonuclease [Streptococcus suis 05ZYH33]
          Length = 75

 Score = 63.3 bits (152), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 10/60 (16%)

Query: 4  VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
          + + +WN++S+ A +            +   +   + DII +QETK  DK    + L+ L
Sbjct: 1  MKLISWNIDSLNAALTAKSPRALLSRAVIDTLVTEDADIIAIQETKLSDKGPTKKHLEIL 60


>gi|326436925|gb|EGD82495.1| hypothetical protein PTSG_03143 [Salpingoeca sp. ATCC 50818]
          Length = 548

 Score = 63.3 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 37/289 (12%), Positives = 82/289 (28%), Gaps = 34/289 (11%)

Query: 4   VTVATWNVNSIRA--------RIHNLAAWIKENNPDIICLQETK---TEDKNFPFETLQS 52
           + +A++N+ +I          R++ LAA ++  +PD+I  QE +     D          
Sbjct: 250 LRIASYNIWNINEFDDGTYEERLNRLAAHVRTEDPDVIAFQEVRHDALRDSQPASLAALL 309

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT---LRIG 109
             YH       +Y         + + + +  P   +D +  +       +      LR+ 
Sbjct: 310 PTYHYVYQPAMTYAEQVFGRVEEGVAVFSKYPIVGIDYRLLYRNRRNHADAHQRVVLRVN 369

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
                 G       +       ++     +     E+          +    D       
Sbjct: 370 VDAPHLGPVSIFVSHYALDETARQRGCVETWEFIKEDNSSTQLFLGDLNAEPDTPCIRFL 429

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYY----ADSWSKNKGI---- 221
              A                   +    ++     +S   +          ++ G+    
Sbjct: 430 SGKAPLLEATTDGVYDAWLELHPEPRPGSN--CAKFSGNAWRTADIRKDEERDVGLTFNT 487

Query: 222 -------RIDHIMLSPEATSLLHSARIDTKPRGWTK--PSDHTPVIVSL 261
                  RID+ ++       +    ID  PR   +   SDH  +++ L
Sbjct: 488 FGEQLVKRIDYALMRHPHMD-VTVCSIDVFPREREEHPASDHLGLVLEL 535


>gi|1791243|gb|AAB41224.1| ORF2 [Rattus norvegicus]
          Length = 1300

 Score = 63.3 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 47/251 (18%), Positives = 76/251 (30%), Gaps = 32/251 (12%)

Query: 6   VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + N+N + + I    L  WI+  +P   CLQET   DK+  +  ++      +  GQK
Sbjct: 37  LISLNINGLNSPIKRHRLTNWIRNEDPAFCCLQETHLRDKDRHYLRVKGWKTTFQANGQK 96

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
              GVAIL   +                 +            + I          I +  
Sbjct: 97  KQAGVAILISNKINF--------------QLKVIKKDKEGHFIFIKGKIHQDELSILNIY 142

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
             +  +           +  +    I  GD+N      D        +D     EV    
Sbjct: 143 APNTRAPTYVKETLLKLKTHIAPHTIIVGDFNTPLSSMDRSWKQKLNSDVDRLREVMSQM 202

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
                   TD  R  +     Y+F+     ++SK     IDHI+      +      I  
Sbjct: 203 ------DLTDIYRTFYPKAKGYTFFSAPHGTFSK-----IDHIIGQKTGLNRYRKIEIIP 251

Query: 244 KPRGWTKPSDH 254
                   SDH
Sbjct: 252 -----CMLSDH 257


>gi|328954136|ref|YP_004371470.1| Endonuclease/exonuclease/phosphatase [Desulfobacca acetoxidans DSM
           11109]
 gi|328454460|gb|AEB10289.1| Endonuclease/exonuclease/phosphatase [Desulfobacca acetoxidans DSM
           11109]
          Length = 253

 Score = 63.3 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 33/270 (12%), Positives = 70/270 (25%), Gaps = 29/270 (10%)

Query: 4   VTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           + + T+N+         N  + R   +   I    PD++  QE         +       
Sbjct: 1   MRIMTFNLRFQNPLDGPNQWKFRKELVLETIWAYQPDLLAAQEVTIP--QLDYLAANLTG 58

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL--RIGNLY 112
           Y      +         + +   + +    G++  +                   +    
Sbjct: 59  YEPFIKHRNIDLTCQYPTIFFRSQTIVAGAGNEFWLSETPEVHRSKSWESAFPRMVTYGS 118

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
               +      + D        L        L E  +      I+    + +        
Sbjct: 119 FREVDRDLWFCFADTHLDHVSALARQKAATMLREFFLQLNQPAILAGDFNDHPQSSVHRV 178

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                   +   ++    F + +   H     +              G RID I+++   
Sbjct: 179 LARGDSPFRDSWEVLGH-FEEGVSTQHKFDGEF-------------FGGRIDWILITEPF 224

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
              L +A I T  +    PSDH P  V ++
Sbjct: 225 --RLKAAEIITYNQAKQYPSDHFPYYVEVN 252


>gi|281312469|sp|A8XU68|TDP2_CAEBR RecName: Full=5'-tyrosyl-DNA phosphodiesterase; Short=5'-Tyr-DNA
           phosphodiesterase
 gi|309357072|emb|CAP36193.2| hypothetical protein CBG_18823 [Caenorhabditis briggsae AF16]
          Length = 337

 Score = 63.3 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 46/274 (16%), Positives = 86/274 (31%), Gaps = 49/274 (17%)

Query: 4   VTVATWNVNSI--RA---RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           +++ +WN++ +  R+   R+  +A  +K+ NPDI+ LQE   +    P + LQSL     
Sbjct: 94  LSLMSWNIDGLDGRSLATRMKAVATIVKKVNPDILFLQEV-VDRDLEPIDKLQSLYKIYY 152

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
           +     Y    ++SK   +E    +   +  +         +I    + + N +L   + 
Sbjct: 153 SNKGCQYYTAILVSKMFEVEKHDVVHFQNSGMYRTLQIVEGSIGGMKVFLVNTHLE--SM 210

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
                                        L F GD N+  +                   
Sbjct: 211 RDHRAQRMAQFSFCMDRCAEIIANNPGCFLFFGGDLNLRDEEIS---------------- 254

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG--IRIDHIM--------- 227
                  + +      + A  DT   +++  Y  D+     G  +R D I          
Sbjct: 255 ------SIPDGVLDAWVSAGCDTKTKWTWDTYKNDNKQGFNGAKMRFDRIYWHGPFNQVH 308

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
            S E    + S            PSDH  +  + 
Sbjct: 309 FSLEGRQRIRSC--------LCFPSDHWAINATF 334


>gi|326664781|ref|XP_003197884.1| PREDICTED: transposon TX1 uncharacterized 149 kDa protein-like
           [Danio rerio]
          Length = 1143

 Score = 63.3 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 45/267 (16%), Positives = 88/267 (32%), Gaps = 33/267 (12%)

Query: 1   MSVVTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           M+ +T+ T NV S+RA  R  ++ +++K  N D+  LQE      + PF T    NY   
Sbjct: 1   MA-LTITTINVRSVRAIVRAQSILSFLKSFNSDVFLLQEC-----SLPFLT----NYR-- 48

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
              ++ +     +           +     +       +T   + + L     +L     
Sbjct: 49  -KWEEIWTPGLSIWSGSNFIKNDGVAILIKNPNILVKGSTVVRDGRALLAHLAFLEQDFN 107

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
           + +    +        L      +  + PL+FAGD+N +    D        +D      
Sbjct: 108 VLNVYGFNNKHERHELLEDLQPHMLGKAPLVFAGDFNCVLTSKDRKGKT---DDFRVDKT 164

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
                   ++    D  +  H     ++++          +  RID+I            
Sbjct: 165 SVLLQGIAKDFKLVDCFKTLHQREEGFTWFSS-----DCTRASRIDYIFARD-------- 211

Query: 239 ARIDTKPR-GWTKPSDHTPVIVSLDIP 264
             I +  R      SDH  +  +  +P
Sbjct: 212 -IIPSDARLTPVFFSDHHMLSCTFSLP 237


>gi|150951488|ref|XP_001387814.2| AP endonuclease [Scheffersomyces stipitis CBS 6054]
 gi|149388636|gb|EAZ63791.2| AP endonuclease [Pichia stipitis CBS 6054]
          Length = 482

 Score = 63.3 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 8/73 (10%)

Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSP-EATSLLHSARIDTKPRGWTKPSDHTPVIVS- 260
            +Y+ W+    S + N G RID I+ S       + +A I     G    SDH PV    
Sbjct: 322 QMYTVWNTLNSSRAINFGSRIDLILASSYRMIKNISNADIWPFILG----SDHCPVFTDF 377

Query: 261 --LDIPEPRKKQQ 271
             L+I +P + + 
Sbjct: 378 EALEIDKPEESKS 390



 Score = 41.7 bits (96), Expect = 0.13,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 17/52 (32%), Gaps = 9/52 (17%)

Query: 3  VVTVATWNVNSIRARIH-----NLAA----WIKENNPDIICLQETKTEDKNF 45
           +   T+NVN ++   +                    DII LQE K    N 
Sbjct: 23 TIRYVTFNVNGVKTLFNYYPWTQFNQDYDLLFSSLQADIITLQELKLSSSNI 74


>gi|194695010|gb|ACF81589.1| unknown [Zea mays]
          Length = 161

 Score = 63.3 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 22/90 (24%), Positives = 35/90 (38%), Gaps = 8/90 (8%)

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG--IRIDHIMLSPEATSL 235
           E R+    L      DA R  H    +   + +      K +G  +RID+ ++S +    
Sbjct: 58  ERRRFGNILFQGKLVDAYRHLHKEKDIDGGFSWSGHPIGKYRGKRMRIDYFLVSEQLKDR 117

Query: 236 LHSARIDTKPRGWT----KPSDHTPVIVSL 261
           + S  +    RG        SDH PV + L
Sbjct: 118 IVSCEMH--GRGIELDGFYGSDHCPVSLEL 145


>gi|159491237|ref|XP_001703579.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158270653|gb|EDO96491.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 598

 Score = 63.3 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 58/291 (19%), Positives = 92/291 (31%), Gaps = 41/291 (14%)

Query: 4   VTVATWNVNSIRARIHNLAA--------WIKENNPDIICLQETK--TEDKNFPFET---L 50
           + +AT N+ S+R  +   A         W  E   DIICLQET          FE    L
Sbjct: 42  LRIATHNMQSLR--LPGAARRVAAAALIW-AELRLDIICLQETHWTCRADQAAFEQTLQL 98

Query: 51  QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-------- 102
            +   H+              +      +V     +   + A  +    T          
Sbjct: 99  IAYELHLSGWKVTGAQWSTSRATAGVAFLVRQELWESSTITAPALSPVPTAMLAGRLAVL 158

Query: 103 -----TQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII 157
                 +++ I N Y P  +   + +   ++    R     S      E +I+AGD+N +
Sbjct: 159 KLRWGGRSITIANTYFPAASTHAAEQAKRELISQLRTQAALSAAATAGEVVIWAGDFNFV 218

Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK 217
              +   +             +    +        D  R  H T   YS   Y A     
Sbjct: 219 --ENPALDSSAGPGGRPGDAPLAALLRAADQPQMVDMYRHRHPTARCYSH-LYRA---PV 272

Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268
             G R+D I +S  A + +  A I          SDH P  + L +P P  
Sbjct: 273 KGGSRLDRIYVSAAAAAAVCHADI-----ALVSSSDHRPAFIDL-LPAPSP 317


>gi|124485534|ref|YP_001030150.1| hypothetical protein Mlab_0711 [Methanocorpusculum labreanum Z]
 gi|124363075|gb|ABN06883.1| Endonuclease/exonuclease/phosphatase [Methanocorpusculum labreanum
           Z]
          Length = 256

 Score = 63.3 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 39/262 (14%), Positives = 74/262 (28%), Gaps = 26/262 (9%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           +++ + TWN      R      +I++ N DI+ +QE ++ DK         + Y++E   
Sbjct: 21  NIMKIITWNCGG-NFRKK--FRYIEKYNADILVIQECESIDKIQSANQTIVIKYNVEWIN 77

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
             S      L  +    +V      +      ++          + I      +      
Sbjct: 78  DGSQRTDKGLGIFLKKGVVFKKQNWETFGLNHYLAVKIENKFDLIGIWTENPGYIRDACV 137

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
                +  +  +              ++  GD N   +          E       E+  
Sbjct: 138 YLQMYEKLFTNKSEN-----------VLLCGDLNSFKKDKYTSKTKNIETYFKKLYEMNI 186

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
                             D   L +F       +       ID+I  + E +        
Sbjct: 187 HSCYHYTYDKELG-----DKEELKTFISPNGKRYH------IDYIFTNMEYSGFFID-DF 234

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
           D         SDH P+ V+LDI
Sbjct: 235 DNFKVSGKNISDHVPLGVNLDI 256


>gi|298482489|ref|ZP_07000675.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. D22]
 gi|298271468|gb|EFI13043.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. D22]
          Length = 316

 Score = 63.3 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 47/302 (15%), Positives = 86/302 (28%), Gaps = 45/302 (14%)

Query: 2   SVVTVATWNV-----------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETL 50
           +  TVA++N+           N    R   +A  ++ ++ DI   QE          E L
Sbjct: 26  TTFTVASYNLRNANGNDSLHGNGWGQRYPVIAKMVQYHDFDIFGTQECFLHQLKDMKEAL 85

Query: 51  QSLNY-HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
              +Y  +     K+    + +        +       L          +      +   
Sbjct: 86  PGYDYIGVGRDDGKTQGEHSAIFYRTDKFDIIEKGDFWLSETPDVPSKGWDAVLPRICSW 145

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
             +           ++  +  I +  R  S  L  E+        N+       +N    
Sbjct: 146 GHFKCKDTGFEFLFFNLHMDHIGKKARVESAYLVQEKMKELGKGKNLPAILTGDFNVDQT 205

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
                  +E        +   F  A           +F  +  +S+++    RIDH+ +S
Sbjct: 206 HQSYNAFVEKGVLCDSYEKCDFRYATNG--------TFNSFNPNSFTE---SRIDHVFVS 254

Query: 230 PEA--------------------TSLLHSA--RIDTKPRGWTKPSDHTPVIVSLDIPEPR 267
           P                          +     ID K      PSDH PV V L+  E +
Sbjct: 255 PAFHVKRYGILTDTYRSIVGNGEKENANDCPEEIDIKAYQARTPSDHFPVKVELEFDERQ 314

Query: 268 KK 269
           +K
Sbjct: 315 QK 316


>gi|46205835|ref|ZP_00048037.2| COG0708: Exonuclease III [Magnetospirillum magnetotacticum MS-1]
          Length = 155

 Score = 63.3 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 2/122 (1%)

Query: 22  AAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIETCGQKSYNGVAILSKYQPIEIV 80
             ++ +  PD++CLQETK  D+ FP +  +   Y +I   GQK YNGVAI+S++  +   
Sbjct: 1   MRFLAQAQPDVLCLQETKCPDELFPLKAFKGSGYENIVFAGQKGYNGVAIISRFPLLTRA 60

Query: 81  THLPGDDLD-VQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFAS 139
                +  D                 L + + Y+P G  +     + K +    FL+   
Sbjct: 61  VMSFCERADARHISAALGPEAGPAAGLVLHDFYVPAGGDLPHRDLNPKFAHKLDFLQELR 120

Query: 140 QR 141
             
Sbjct: 121 AW 122


>gi|222445160|ref|ZP_03607675.1| hypothetical protein METSMIALI_00781 [Methanobrevibacter smithii
           DSM 2375]
 gi|222434725|gb|EEE41890.1| hypothetical protein METSMIALI_00781 [Methanobrevibacter smithii
           DSM 2375]
          Length = 231

 Score = 63.3 bits (152), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 40/258 (15%), Positives = 69/258 (26%), Gaps = 27/258 (10%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + +WN N  + R      +I   + DI  +QE     +N                   
Sbjct: 1   MRIISWNANG-KFREK--FPFILNEDADIYVIQEC----ENPEISNSDEYIEFASNYYWV 53

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
             N    L  +    +   L   D      FI      +   L +       G   +   
Sbjct: 54  GENQYYGLGIFAKNNVKLELMDLDAKGLRYFIPVNVNDDFNLLGVWTNPDMDGTKTS--- 110

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
                  I ++           E +I  GD+N      D         + C  +E  +  
Sbjct: 111 --YYPKEITKYYEEHKDSEFFNEDMIICGDFNC-----DVRLKGSHAKNVCEVIE--KLS 161

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           +      +              +F+ Y       +     DHI +S      +    I  
Sbjct: 162 ECGLVDIYHQLTGEKEGEETKPTFYMYRHLDKPYHV----DHIFMSS---DKIKDLEIC- 213

Query: 244 KPRGWTKPSDHTPVIVSL 261
               W   SDH P+I  +
Sbjct: 214 DADKWLHLSDHVPLIFEI 231


>gi|254885217|ref|ZP_05257927.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|294777877|ref|ZP_06743321.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           vulgatus PC510]
 gi|319640383|ref|ZP_07995107.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. 3_1_40A]
 gi|254838010|gb|EET18319.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|294448331|gb|EFG16887.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           vulgatus PC510]
 gi|317387986|gb|EFV68841.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. 3_1_40A]
          Length = 472

 Score = 62.9 bits (151), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/278 (12%), Positives = 66/278 (23%), Gaps = 27/278 (9%)

Query: 1   MSVVTVATWNVN----------SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETL 50
           +S + V  +N+            +      +   IK  NPD+I + ET         + L
Sbjct: 206 LSQLKVMAFNIFHGGHELGQEVGVN----RVVEVIKAENPDVIGMVETYGS-GAIIADAL 260

Query: 51  QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR--- 107
               Y   +            +               +    +       ++ + +    
Sbjct: 261 GYYFYLRSSNLSIMSRYPITDTYDLYDSFNCSAATLQISPSQQINYINLWLDYRPITNDQ 320

Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167
           I                             +         ++     +            
Sbjct: 321 INACESIENIIAGEWSRRAAQLQSILKAFPSQWNTMETPLIVSGDFNSDSHLDWKDDTKN 380

Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF--WDYYADSWSKNKGIRIDH 225
           +  ++            +     F D+ R  H     Y    W   A         RID 
Sbjct: 381 MNGHNGYVIEWPTSKLMEK--AHFIDSYREIHPDVKKYPCLTWSTMAK---NELQYRIDF 435

Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           I    +    + S  ID  P     PSDH  V+ + ++
Sbjct: 436 IYYKGKDIKAIQSEMIDKHP--VRYPSDHAAVVTTFNL 471


>gi|319900045|ref|YP_004159773.1| Endonuclease/exonuclease/phosphatase [Bacteroides helcogenes P
           36-108]
 gi|319415076|gb|ADV42187.1| Endonuclease/exonuclease/phosphatase [Bacteroides helcogenes P
           36-108]
          Length = 295

 Score = 62.9 bits (151), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 38/268 (14%), Positives = 77/268 (28%), Gaps = 27/268 (10%)

Query: 7   ATWNV------NSIRA---RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57
           A++N+      +S+ A   R   + A ++ ++ DI  +QE          + +  LN + 
Sbjct: 44  ASFNIRMDTPKDSVNAWPNRKELVKALVRFHDFDIFGVQE--AFRHQL--DGILELNEYA 99

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTH--LPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
                +  N     S     +        GD    +           T   RI +     
Sbjct: 100 GIGEGRDGNDEGEHSAIIYKKSRFTLLDKGDFWYSETPDRIGLGWDATCCNRICSWGKFK 159

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
            N      Y     +  + +               +       +      P     D   
Sbjct: 160 ENKTGKEFYFFNSHFDHQGVVARR---------ESSKLLLKKIREIAGNTPAFSTGDYNA 210

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
           T +       + +    D+   +    +  +   Y       N   RID++ ++ E    
Sbjct: 211 TPDSEPIRIIVSDGLLKDSYTLSEQAPYG-TVGTYQGFKRLANSQSRIDYVFVTKEV--R 267

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +       +      PSDH PV+V  ++
Sbjct: 268 ILKYGTLNEVPNGKFPSDHFPVMVVAEL 295


>gi|328684674|gb|AEB33765.1| DNA lyase APN2 [Erysiphe necator]
          Length = 284

 Score = 62.9 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 22/53 (41%), Gaps = 4/53 (7%)

Query: 210 YYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
              +S   N G RID+++ S +       + I     G    SDH PV   L+
Sbjct: 1   QKTNSRPGNLGSRIDYVLCSEDWKDWFCDSNIQEGLMG----SDHCPVYAVLN 49


>gi|186507183|ref|NP_001118500.1| ARP; DNA-(apurinic or apyrimidinic site) lyase [Arabidopsis
           thaliana]
 gi|330254891|gb|AEC09985.1| apurinic endonuclease-redox protein [Arabidopsis thaliana]
          Length = 403

 Score = 62.9 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 13/111 (11%)

Query: 4   VTVATWNVNSIRARIH----NLAAWIKENNPDIICLQETKTEDKNFPFETLQS---LNYH 56
           V V TWNVN +R  +     +     +  N DI+CLQETK + K+   E ++      Y 
Sbjct: 276 VKVMTWNVNGLRGLLKFESFSALQLAQRENFDILCLQETKLQVKDV--EEIKKTLIDGYD 333

Query: 57  IETCGQK----SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
                       Y+G AI+S+ +P+ +         D + R + A F    
Sbjct: 334 HSFWSCSVSKLGYSGTAIISRIKPLSVRYGTGLSGHDTEGRIVTAEFDSFY 384


>gi|255530398|ref|YP_003090770.1| endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM
           2366]
 gi|255343382|gb|ACU02708.1| Endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM
           2366]
          Length = 370

 Score = 62.9 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 46/281 (16%), Positives = 85/281 (30%), Gaps = 37/281 (13%)

Query: 3   VVTVATWNVNSIR--------ARIHNLAAWIKENNPDIICLQE--TKTEDKNFPFETLQS 52
           ++ + T+NV+S +        +    +   I+  NPDIIC QE  T+   K  P++   S
Sbjct: 105 LIRMMTYNVHSFKPYGEGNIESVKQQMLDLIENENPDIICFQEYFTR---KKGPYDITDS 161

Query: 53  LN------YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDL--DVQARFIEATFTINTQ 104
           L       YH      ++      L+ +    I                 I    T+  +
Sbjct: 162 LKRILNKPYHYFEPISQNDYEATGLAIFSKYPIKNKGTIAFNKVYRGNSSIYVDVTVKNK 221

Query: 105 TLRIGNLYLPHGNP--ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD 162
             RI N+++   +         D     +   L  + + L +           +      
Sbjct: 222 MFRIYNVHMQSISFQEQDYMYLDQVKYQMDPKLYASKRILVMLRNAFLKRSEQVDIMKAH 281

Query: 163 CYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR 222
                +    A    +   S+   Q             T    ++       +   +   
Sbjct: 282 IKTCELPFIIAGDFNDTPASYAVKQMTKSLKNTFKEQGTGFGKTY----NGKFPNFQ--- 334

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           ID+I  +      + + RI        K SDH PV   L +
Sbjct: 335 IDYIATTQNFD--VMNYRIIEA-----KLSDHFPVRSDLRL 368


>gi|330895697|gb|EGH27989.1| exodeoxyribonuclease III [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 77

 Score = 62.9 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 4/61 (6%)

Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
             YS+W     +   N G R D+ +L+P     + SAR+  +PR     S H P+IV  D
Sbjct: 17  DQYSWWPDNEQAEMLNLGWRFDYQILTPGLRRFVRSARLPRQPR----FSQHAPLIVDYD 72

Query: 263 I 263
            
Sbjct: 73  W 73


>gi|302820700|ref|XP_002992016.1| hypothetical protein SELMODRAFT_430260 [Selaginella moellendorffii]
 gi|300140138|gb|EFJ06865.1| hypothetical protein SELMODRAFT_430260 [Selaginella moellendorffii]
          Length = 379

 Score = 62.9 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/190 (18%), Positives = 60/190 (31%), Gaps = 23/190 (12%)

Query: 98  TFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII 157
               +     + N+Y P+       + D  +             L+    +I  GD NI 
Sbjct: 186 CIVTDHGYFVLFNIYGPNVGCGDVERQDFMLQCR------LESILKQGRRIIIVGDLNIS 239

Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK 217
           P P +  +P    +        R     +  +       A       Y+ W   + +   
Sbjct: 240 PYPINSCDPGPEFDTNPSRQWFRSLL--VSEVVRFQTRFACFILKEAYTCWSQASGAEEF 297

Query: 218 NKGIRIDHIMLSPEATSL--------LHSARIDTKPRGWTK------PSDHTPVIVSLD- 262
           N G RIDH++++                 A++DT PR           SDH PVI+    
Sbjct: 298 NYGSRIDHVLIAGPCAGHYMCDILLEFKRAKLDTLPRWSGGRSLKLDGSDHAPVILQFKH 357

Query: 263 IPEPRKKQQD 272
           +P     +  
Sbjct: 358 LPSIPPHEAP 367


>gi|225470786|ref|XP_002269691.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 693

 Score = 62.9 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 34/259 (13%), Positives = 72/259 (27%), Gaps = 31/259 (11%)

Query: 4   VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + +WN   + +R     +  +++   PDI+ +QETK        +      +      
Sbjct: 1   MKIISWNTRGLGSRKKRRVVKDFLRSEKPDIVMIQETK--------KAECDRRFVGSVWT 52

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
            ++     + +      I+       L  +   + +        +     +        +
Sbjct: 53  ARNKEWAVLPACGASGGILVMWDSKKLHSEEVVLGSFSVSVKFAVDGSEQFWLSAVYGPN 112

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
           +    K  W +    F            F        +          ++   F  E   
Sbjct: 113 STALRKDFWEELSDIFCLSSPCWCVGGDFNVIRRCSEKLGGGRLTPSMKDLDDFIRENEL 172

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
               L++  FT +    H                      R+D  + S E   L   +  
Sbjct: 173 IDPPLRSASFTWSNMQEHPVCK------------------RLDRFLYSNEWEQLFPQSLQ 214

Query: 242 DTKPRGWTKPSDHTPVIVS 260
           D  PR     SDH P+++ 
Sbjct: 215 DVLPR---WTSDHWPIVLE 230


>gi|328873522|gb|EGG21889.1| hypothetical protein DFA_01775 [Dictyostelium fasciculatum]
          Length = 296

 Score = 62.9 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 39/289 (13%), Positives = 73/289 (25%), Gaps = 36/289 (12%)

Query: 3   VVTVATWNV------NSIRA---RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
            + + ++N+      + I     R + +   IK+  P II  QE          E +  L
Sbjct: 12  TLRIMSFNIRYDSHKDGINNWVNRRNLVVDTIKQTKPTIIGFQE--CLKNQI-EEIINDL 68

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
                  G    +G++             +  D         +     +     +     
Sbjct: 69  GGDYSFVGVGRDDGLSKGEYSPIAYNNKLVRYDHGSHFWISQDCYVAGSKSWDTMCPRIA 128

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
             G              +   L   S     E  L+     + +     C     +  + 
Sbjct: 129 TWGKFKYHNNSKKSFYTLNTHLDHMSSLARSEGTLLIKSFVSHLDPSIPCIITGDFNEEV 188

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR----------- 222
                     +    +G              YS   +   S + N   R           
Sbjct: 189 GSKPYRNIIDKMDDMVGHKYMNMLKIPIAPTYSLKTFKDCSKAANN--RDGPFHTFTGFT 246

Query: 223 ------IDHIMLSPEATSLLHSARIDTKPRGWT----KPSDHTPVIVSL 261
                 ID+I ++    S +   ++ T          KPSDH P+   L
Sbjct: 247 DEYKVTIDYIFVNASVKS-VDKFQVLTGHLKIETDGLKPSDHLPIYADL 294


>gi|296478229|gb|DAA20344.1| craniofacial development protein 2 [Bos taurus]
          Length = 592

 Score = 62.9 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 37/291 (12%), Positives = 72/291 (24%), Gaps = 37/291 (12%)

Query: 6   VATWNVNSIRARIHNLAAWIKEN----NPDIICLQETKTE-DKNFPFETLQSLNYHIETC 60
           + TWNV S+          +K+     N DI+ + E K         +       H    
Sbjct: 245 IGTWNVRSMN---PGKLDVVKQEMERINIDILGISELKWTGMGELNSDD------HYIYY 295

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
             +       ++      +   + G +L                   I            
Sbjct: 296 CGQQSLRRNGVALIVNKRVRNAIIGCNLKNDRMISVRFQGKPFNLTVIQVYAPTPYAEEG 355

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
                 +       +      L +            IP     +   +        +E  
Sbjct: 356 EVYRFYEDLQHLLEITPKIDVLFIIGDWNAKVGSQEIPGITGRFGLGMQNEAGRRLIEFC 415

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
                  N            +  LY++         +     ID+I+      S + SA+
Sbjct: 416 H-----HNRLVITNTLFQQPSRRLYTWTSPDGRYRDQ-----IDYIICRQRWRSSVQSAK 465

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI----------PEPRKKQQDSTSQNMKPI 281
                 G    SDH  +I    +          P     ++D+T++  K +
Sbjct: 466 TRP---GADCGSDHKLLIAKFRLKLKIIPKTTRPFRVTNEEDATNEEAKSV 513


>gi|209869972|dbj|BAG75458.1| p97Bcnt protein [Capra hircus]
          Length = 592

 Score = 62.9 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 37/291 (12%), Positives = 72/291 (24%), Gaps = 37/291 (12%)

Query: 6   VATWNVNSIRARIHNLAAWIKEN----NPDIICLQETKTE-DKNFPFETLQSLNYHIETC 60
           + TWNV S+          +K+     N DI+ + E K         +       H    
Sbjct: 245 IGTWNVRSMN---PGKLDVVKQEMERINIDILGISELKWTGMGELNSDD------HYIYY 295

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
             +       ++      +   + G +L                   I            
Sbjct: 296 CGQQSLRRNGVALIVNKRVRNAIIGCNLKNDRMISVRFQGKPFNLTVIQVYAPTPYAEEG 355

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
                 +       +      L +            IP     +   +        +E  
Sbjct: 356 EVYRFYEDLQHLLEITPKIDVLFIIGDWNAKVGSQEIPGITGRFGLGMQNEAGRRLIEFC 415

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
                  N            +  LY++         +     ID+I+      S + SA+
Sbjct: 416 H-----HNRLVITNTLFQQPSRRLYTWTSPDGRYRDQ-----IDYIICRQRWRSSVQSAK 465

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI----------PEPRKKQQDSTSQNMKPI 281
                 G    SDH  +I    +          P     ++D+T++  K +
Sbjct: 466 TRP---GADCGSDHKLLIAKFRLKLKIIPKTTRPFRVTNEEDATNEEAKSV 513


>gi|2114148|dbj|BAA20066.1| bucentaur [Bos taurus]
          Length = 435

 Score = 62.9 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 37/291 (12%), Positives = 72/291 (24%), Gaps = 37/291 (12%)

Query: 6   VATWNVNSIRARIHNLAAWIKEN----NPDIICLQETKTE-DKNFPFETLQSLNYHIETC 60
           + TWNV S+          +K+     N DI+ + E K         +       H    
Sbjct: 130 IGTWNVRSMN---PGKLDVVKQEMERINIDILGISELKWTGMGELNSDD------HYIYY 180

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
             +       ++      +   + G +L                   I            
Sbjct: 181 CGQQSLRRNGVALIVNKRVRNAIIGCNLKNDRMISVRFQGKPFNLTVIQVYAPTPYAEEG 240

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
                 +       +      L +            IP     +   +        +E  
Sbjct: 241 EVYRFYEDLQHLLEITPKIDVLFIIGDWNAKVGSQEIPGITGRFGLGMQNEAGRRLIEFC 300

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
                  N            +  LY++         +     ID+I+      S + SA+
Sbjct: 301 H-----HNRLVITNTLFQQPSRRLYTWTSPDGRYRDQ-----IDYIICRQRWRSSVQSAK 350

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI----------PEPRKKQQDSTSQNMKPI 281
                 G    SDH  +I    +          P     ++D+T++  K +
Sbjct: 351 TRP---GADCGSDHKLLIAKFRLKLKIIPKTTRPFRVTNEEDATNEEAKSV 398


>gi|2309001|dbj|BAA21722.1| BCNT [Bos taurus]
          Length = 391

 Score = 62.9 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 37/291 (12%), Positives = 72/291 (24%), Gaps = 37/291 (12%)

Query: 6   VATWNVNSIRARIHNLAAWIKEN----NPDIICLQETKTE-DKNFPFETLQSLNYHIETC 60
           + TWNV S+          +K+     N DI+ + E K         +       H    
Sbjct: 114 IGTWNVRSMN---PGKLDVVKQEMERINIDILGISELKWTGMGELNSDD------HYIYY 164

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
             +       ++      +   + G +L                   I            
Sbjct: 165 CGQQSLRRNGVALIVNKRVRNAIIGCNLKNDRMISVRFQGKPFNLTVIQVYAPTPYAEEG 224

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
                 +       +      L +            IP     +   +        +E  
Sbjct: 225 EVYRFYEDLQHLLEITPKIDVLFIIGDWNAKVGSQEIPGITGRFGLGMQNEAGRRLIEFC 284

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
                  N            +  LY++         +     ID+I+      S + SA+
Sbjct: 285 H-----HNRLVITNTLFQQPSRRLYTWTSPDGRYRDQ-----IDYIICRQRWRSSVQSAK 334

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI----------PEPRKKQQDSTSQNMKPI 281
                 G    SDH  +I    +          P     ++D+T++  K +
Sbjct: 335 TRP---GADCGSDHKLLIAKFRLKLKIIPKTTRPFRVTNEEDATNEEAKSV 382


>gi|22779307|dbj|BAC15592.1| bcnt [Bos taurus]
          Length = 592

 Score = 62.9 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 37/291 (12%), Positives = 72/291 (24%), Gaps = 37/291 (12%)

Query: 6   VATWNVNSIRARIHNLAAWIKEN----NPDIICLQETKTE-DKNFPFETLQSLNYHIETC 60
           + TWNV S+          +K+     N DI+ + E K         +       H    
Sbjct: 245 IGTWNVRSMN---PGKLDVVKQEMERINIDILGISELKWTGMGELNSDD------HYIYY 295

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
             +       ++      +   + G +L                   I            
Sbjct: 296 CGQQSLRRNGVALIVNKRVRNAIIGCNLKNDRMISVRFQGKPFNLTVIQVYAPTPYAEEG 355

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
                 +       +      L +            IP     +   +        +E  
Sbjct: 356 EVYRFYEDLQHLLEITPKIDVLFIIGDWNAKVGSQEIPGITGRFGLGMQNEAGRRLIEFC 415

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
                  N            +  LY++         +     ID+I+      S + SA+
Sbjct: 416 H-----HNRLVITNTLFQQPSRRLYTWTSPDGRYRDQ-----IDYIICRQRWRSSVQSAK 465

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI----------PEPRKKQQDSTSQNMKPI 281
                 G    SDH  +I    +          P     ++D+T++  K +
Sbjct: 466 TRP---GADCGSDHKLLIAKFRLKLKIIPKTTRPFRVTNEEDATNEEAKSV 513


>gi|27807389|ref|NP_777225.1| craniofacial development protein 2 [Bos taurus]
 gi|2114146|dbj|BAA20065.1| bucentaur [Bos taurus]
          Length = 592

 Score = 62.9 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 37/291 (12%), Positives = 72/291 (24%), Gaps = 37/291 (12%)

Query: 6   VATWNVNSIRARIHNLAAWIKEN----NPDIICLQETKTE-DKNFPFETLQSLNYHIETC 60
           + TWNV S+          +K+     N DI+ + E K         +       H    
Sbjct: 245 IGTWNVRSMN---PGKLDVVKQEMERINIDILGISELKWTGMGELNSDD------HYIYY 295

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
             +       ++      +   + G +L                   I            
Sbjct: 296 CGQQSLRRNGVALIVNKRVRNAIIGCNLKNDRMISVRFQGKPFNLTVIQVYAPTPYAEEG 355

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
                 +       +      L +            IP     +   +        +E  
Sbjct: 356 EVYRFYEDLQHLLEITPKIDVLFIIGDWNAKVGSQEIPGITGRFGLGMQNEAGRRLIEFC 415

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
                  N            +  LY++         +     ID+I+      S + SA+
Sbjct: 416 H-----HNRLVITNTLFQQPSRRLYTWTSPDGRYRDQ-----IDYIICRQRWRSSVQSAK 465

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI----------PEPRKKQQDSTSQNMKPI 281
                 G    SDH  +I    +          P     ++D+T++  K +
Sbjct: 466 TRP---GADCGSDHKLLIAKFRLKLKIIPKTTRPFRVTNEEDATNEEAKSV 513


>gi|82592672|sp|O02751|CFDP2_BOVIN RecName: Full=Craniofacial development protein 2; AltName: Full=p97
           bucentaur protein
          Length = 592

 Score = 62.9 bits (151), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 37/291 (12%), Positives = 72/291 (24%), Gaps = 37/291 (12%)

Query: 6   VATWNVNSIRARIHNLAAWIKEN----NPDIICLQETKTE-DKNFPFETLQSLNYHIETC 60
           + TWNV S+          +K+     N DI+ + E K         +       H    
Sbjct: 245 IGTWNVRSMN---PGKLDVVKQEMERINIDILGISELKWTGMGELNSDD------HYIYY 295

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
             +       ++      +   + G +L                   I            
Sbjct: 296 CGQQSLRRNGVALIVNKRVRNAIIGCNLKNDRMISVRFQGKPFNLTVIQVYAPTPYAEEG 355

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
                 +       +      L +            IP     +   +        +E  
Sbjct: 356 EVYRFYEDLQHLLEITPKIDVLFIIGDWNAKVGSQEIPGITGRFGLGMQNEAGRRLIEFC 415

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
                  N            +  LY++         +     ID+I+      S + SA+
Sbjct: 416 H-----HNRLVITNTLFQQPSRRLYTWTSPDGRYRDQ-----IDYIICRQRWRSSVQSAK 465

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI----------PEPRKKQQDSTSQNMKPI 281
                 G    SDH  +I    +          P     ++D+T++  K +
Sbjct: 466 TRP---GADCGSDHKLLIAKFRLKLKIIPKTTRPFRVTNEEDATNEEAKSV 513


>gi|302866198|ref|YP_003834835.1| endonuclease/exonuclease/phosphatase [Micromonospora aurantiaca
           ATCC 27029]
 gi|302569057|gb|ADL45259.1| Endonuclease/exonuclease/phosphatase [Micromonospora aurantiaca
           ATCC 27029]
          Length = 265

 Score = 62.9 bits (151), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 37/271 (13%), Positives = 78/271 (28%), Gaps = 19/271 (7%)

Query: 3   VVTVATWNVNSIRA---------RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           ++ V TWN   IR          R   + + +    PD++ LQE +  D        + L
Sbjct: 1   MLRVMTWN---IRTGGRDGDGTDRRDRIVSVVTAQRPDVLALQELRGMDATLGGLAGR-L 56

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
                         VA+L +     +                          L + + +L
Sbjct: 57  GMTPYLARSCFGQPVAVLVRPPLRVLRAGRVRRPFHH--AAARVQVATGAGPLTVFSTHL 114

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
              +        D ++   R        L  +   +     +                  
Sbjct: 115 NPYSGGRRRMEADWLAAALRRTGGELALLAGDMNTLEPTADHTARLAGLATPYRRRHLRR 174

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                  ++  +L + G  D    +  D     +    +  +     G+R+D+++ +P  
Sbjct: 175 DGRTVDTRAVARLLDAGLVDLWPWSGGDEPGGLTVPTRHGGAEF--AGMRLDYLLATPAL 232

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              + + R   +       SDH PV+  +D+
Sbjct: 233 ADRVRAVR-VVRDGDADSASDHYPVLAEVDL 262


>gi|322417960|ref|YP_004197183.1| endonuclease/exonuclease/phosphatase [Geobacter sp. M18]
 gi|320124347|gb|ADW11907.1| Endonuclease/exonuclease/phosphatase [Geobacter sp. M18]
          Length = 346

 Score = 62.5 bits (150), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 41/270 (15%), Positives = 80/270 (29%), Gaps = 35/270 (12%)

Query: 2   SVVTVATWNVN-SIRARIHNLAAWIKENNPDIICLQE-TKTEDKNFPFETLQSLNYHIET 59
           + + V TWN+    R  +  +   ++ + PDI+  Q+  +  +             ++  
Sbjct: 96  ATLRVMTWNIKYGKRDLMPLIEE-LERSRPDIVLFQDAVRAGEGPLVD--------YLSG 146

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
              +S     + S+Y    +  H        +  F+     + ++ + + N++       
Sbjct: 147 WQLESRGQYLVASRYPISAVEVHALPSRDRKKETFLRCRVRVGSREISLYNVHFKTPRRS 206

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
            +     K                +E  L+ A         +       +     F    
Sbjct: 207 LNAFRKAKRGAWYIPKAIDRFEGNVETRLLQAERVA----EYLGRERGDFLVAGDFNSPD 262

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSF--------WDYYADSWSKNKGIRIDHIMLSPE 231
                +           A     + YS+          Y   SW     +RIDHIM S  
Sbjct: 263 HSLVCETLRKTGMTDAFAEAGRGYGYSYGHFLLKDRIPYLRASW-----MRIDHIMTSAG 317

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
                 + R+     G  + SDH PVI   
Sbjct: 318 L--RARNCRV-----GTRRASDHRPVIADF 340


>gi|68490863|ref|XP_710758.1| potential DNA repair apurinic/apyrimidinic endonuclease Apn2p
           [Candida albicans SC5314]
 gi|68490945|ref|XP_710720.1| potential DNA repair apurinic/apyrimidinic endonuclease Apn2p
           [Candida albicans SC5314]
 gi|46431957|gb|EAK91472.1| potential DNA repair apurinic/apyrimidinic endonuclease Apn2p
           [Candida albicans SC5314]
 gi|46431999|gb|EAK91510.1| potential DNA repair apurinic/apyrimidinic endonuclease Apn2p
           [Candida albicans SC5314]
          Length = 451

 Score = 62.5 bits (150), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 5/63 (7%)

Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSPE-ATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
            +Y+ W+   ++   N G RID I+ S E     + +A I     G    SDH PV    
Sbjct: 334 KMYTVWNTLTNARQINHGSRIDLILFSDEKMVQRISNADIWPFLMG----SDHCPVFTDC 389

Query: 262 DIP 264
           D+ 
Sbjct: 390 DMS 392



 Score = 46.3 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 18/52 (34%), Gaps = 11/52 (21%)

Query: 2  SVVTVATWNVNSIRARI-----------HNLAAWIKENNPDIICLQETKTED 42
          S +   T+NVN ++               +          DII LQE K  +
Sbjct: 22 STIRYITFNVNGVKTIFNYHPWNQLKNNKDFNTLFNLLQADIITLQELKLTE 73


>gi|238878531|gb|EEQ42169.1| conserved hypothetical protein [Candida albicans WO-1]
          Length = 451

 Score = 62.5 bits (150), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 5/63 (7%)

Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSPE-ATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
            +Y+ W+   ++   N G RID I+ S E     + +A I     G    SDH PV    
Sbjct: 336 KMYTVWNTLTNARQINHGSRIDLILFSDEKMVQRISNADIWPFLMG----SDHCPVFTDC 391

Query: 262 DIP 264
           D+ 
Sbjct: 392 DMS 394



 Score = 46.3 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 18/52 (34%), Gaps = 11/52 (21%)

Query: 2  SVVTVATWNVNSIRARI-----------HNLAAWIKENNPDIICLQETKTED 42
          S +   T+NVN ++               +          DII LQE K  +
Sbjct: 22 STIRYITFNVNGVKTIFNYHPWNQLKNNKDFNTLFNLLQADIITLQELKLTE 73


>gi|317151124|ref|XP_001824462.2| DNA lyase [Aspergillus oryzae RIB40]
          Length = 556

 Score = 62.5 bits (150), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 20/84 (23%), Positives = 31/84 (36%), Gaps = 8/84 (9%)

Query: 5  TVATWNVNSIRA-------RIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56
           + TWNVN IR        R      A  +    DI+ LQETK + K+   + +    + 
Sbjct: 4  RITTWNVNGIRNPFAYEPWRGKRTFEAMFEILEADIVVLQETKIQRKDLRDDMVLVPGWD 63

Query: 57 IETCGQKSYNGVAILSKYQPIEIV 80
                +S  G + +  Y      
Sbjct: 64 CHFSLPRSKKGYSGVVIYTRNATC 87


>gi|228469461|ref|ZP_04054469.1| AP endonuclease domain protein [Porphyromonas uenonis 60-3]
 gi|228309036|gb|EEK17679.1| AP endonuclease domain protein [Porphyromonas uenonis 60-3]
          Length = 392

 Score = 62.5 bits (150), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 42/249 (16%), Positives = 74/249 (29%), Gaps = 21/249 (8%)

Query: 23  AWIKENNPDIICLQE-------TKTEDKNFPFETLQSLNYH-IETCGQKSYNGVAILSKY 74
            ++ +++ DIICLQE       +K   +     TL +  Y+      +   + + +LSKY
Sbjct: 156 DYLAKSDADIICLQEAWLSSNKSKYMSERSLRHTLSNYPYYSSAYAVKDHGSRLIVLSKY 215

Query: 75  QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRF 134
             +           +  A F             +            +  +        + 
Sbjct: 216 PILSTRPIDLHSKFNGGAVFTILVGEKKLVLYNLHLESFGFTREEQAHYFQLAQEVNPKG 275

Query: 135 LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDA 194
              A            A     I Q  +            F            + G  DA
Sbjct: 276 FTQAVGGRFSPAFKRRAQQVEQIYQDINYQESPYLLVCGDFNDTPISYTHHRLSAGLHDA 335

Query: 195 IRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDH 254
           I  T      YS++      +    G+RIDH++ S +  +    A +D         SDH
Sbjct: 336 IATTG-RGTNYSYY------FKSLIGVRIDHMLYSDQIVARA--AHVDRSV----NISDH 382

Query: 255 TPVIVSLDI 263
            P+I    +
Sbjct: 383 KPIICYFKL 391


>gi|319902450|ref|YP_004162178.1| Endonuclease/exonuclease/phosphatase [Bacteroides helcogenes P
           36-108]
 gi|319417481|gb|ADV44592.1| Endonuclease/exonuclease/phosphatase [Bacteroides helcogenes P
           36-108]
          Length = 360

 Score = 62.5 bits (150), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 39/266 (14%), Positives = 82/266 (30%), Gaps = 21/266 (7%)

Query: 4   VTVATWNVN---------SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           + +AT+NV          S       +A +++    D++C QE   ++++FP ++++   
Sbjct: 104 LKIATYNVQDFGYEVTGYS----CKEIARFMEREGVDVLCFQEFD-DNEDFPMDSIRRAL 158

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
            H       + + +  +     +     L G            +   +          L 
Sbjct: 159 SHWPYALIPNDDSIRGVLPMA-VFSRYPLSGHRFITYQGSANCSMMCDIALGTDTIRLLN 217

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
           +    TS     +    +       + +   +   +    N + +    Y    +   + 
Sbjct: 218 NHLQTTSVSQKRRKWEREMKADDTRREVHAAKDAAYTLHENFVKRTEQTYIISYYAKHSP 277

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
           + + V   F  L +      +R         +   Y          +RID+I  SP    
Sbjct: 278 YPVLVCGDFNSLPSSHTYYHLREFLKDGFRTAGHGYMHTYRYGKGLLRIDYIFHSPTLE- 336

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVS 260
                 ID         SDH PVI+ 
Sbjct: 337 -----GIDYYSPDLDLCSDHNPVIME 357


>gi|310639778|ref|YP_003944536.1| exodeoxyribonuclease iii rgfb-like protein [Paenibacillus polymyxa
           SC2]
 gi|309244728|gb|ADO54295.1| Exodeoxyribonuclease III RgfB-like protein [Paenibacillus polymyxa
           SC2]
          Length = 273

 Score = 62.5 bits (150), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 40/286 (13%), Positives = 79/286 (27%), Gaps = 39/286 (13%)

Query: 4   VTVATWNVNSIRAR--------IHNLAAWIKENNPDIICLQETK--TEDKNFPFETLQSL 53
           + + T N +   A         +  LAA+I E   D+I LQE     E+     + L + 
Sbjct: 1   MKLLTLNAH---AWMEENQHDKLKQLAAFIDEQQFDVIALQEVNQSLEETPLTPDDLGAY 57

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
            Y  +       +  A +      +             A++ E    ++   +       
Sbjct: 58  -YSADPEVVIKRDNYAYVLNGLLSDAYHWTWAPAHIGFAKYDEGLAILSKTPITATVNEY 116

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
                        KI  I+  +              +                     + 
Sbjct: 117 ISSMQDYDNYRSRKIVGIQTVVDGVQAWFVSGHYNWWND-------EESFRGLWDRTTEV 169

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG------------- 220
              L     F         +     +D      + D Y+++  ++ G             
Sbjct: 170 LDPLAPAPVFVMGDFNNAAEVRGEGYDYVMQSGWSDTYSNAAVRDAGHTVIKAIAGWESN 229

Query: 221 ---IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              +RID+I  S    + + S+ +    +     SDH  V V L++
Sbjct: 230 AEPLRIDYIFSSK--AAQVQSSAVVLNGKTGPVVSDHFGVAVELEL 273


>gi|325285170|ref|YP_004260960.1| Endonuclease/exonuclease/phosphatase [Cellulophaga lytica DSM 7489]
 gi|324320624|gb|ADY28089.1| Endonuclease/exonuclease/phosphatase [Cellulophaga lytica DSM 7489]
          Length = 344

 Score = 62.5 bits (150), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 38/269 (14%), Positives = 71/269 (26%), Gaps = 37/269 (13%)

Query: 4   VTVATWNVNSI--------RARIHNLAAWIKENNPDIICLQE-TKTEDKNFPFETLQSLN 54
           +TV T+N            +A    +  ++ + +PDIIC+QE ++               
Sbjct: 100 LTVMTYNTRGFNKYEWSSDKALGDKIIDFVLKEDPDIICIQEFSRVRYHQL------KHR 153

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           Y         Y      + Y    I+                A       T+R+ NL+L 
Sbjct: 154 YKYNYVAPGFYVNKVNQAIYSKYPILNTGELPFKLTNNIASFADIAYKNDTIRVYNLHLE 213

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
               +               +                       +    +          
Sbjct: 214 SLKVVP----------DMETISNEESSKLYGRITKSFKKQQDQAKIVQEHIKGNPYKTIV 263

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
                   +  +      D +   ++    Y        ++ K   +RID I+ S E   
Sbjct: 264 CGDFNNNQYSNVYRTIKGDLLDTFNEKGSAYG----RTYNF-KYYPVRIDFILASKEF-- 316

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                 +        K SDH PV+ S ++
Sbjct: 317 -----EVIAHKNYDNKLSDHFPVMASFNL 340


>gi|37654244|gb|AAQ96227.1| LRRGT00014 [Rattus norvegicus]
          Length = 375

 Score = 62.5 bits (150), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 46/251 (18%), Positives = 75/251 (29%), Gaps = 32/251 (12%)

Query: 6   VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + N+N + + I    L  WI+  +P   CLQET   DK+  +  ++      +  GQK
Sbjct: 12  LISLNINGLDSPIKRHRLTNWIRNEDPAFCCLQETHLRDKDRHYLRVKGWKTTFQANGQK 71

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
              GVAIL   +                 +            + I            +  
Sbjct: 72  KQAGVAILISNKINF--------------QLKVIKKDKEGHFIFIKGKIHQDELSSLNIY 117

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
             +  +           +  +    I  GD+N      D        +D     EV    
Sbjct: 118 APNTRAPTYVKETLLKLKAHIAPHTIIVGDFNTPLSSMDRSWKQKLNSDVDRLREVMSQM 177

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
                   TD  R  +     Y+F+     ++SK     IDHI+      +      I  
Sbjct: 178 ------DLTDIYRTFYPKAKGYTFFSAPHGTFSK-----IDHIIGQKTGLNRYRKIEIIP 226

Query: 244 KPRGWTKPSDH 254
                   SDH
Sbjct: 227 CVL-----SDH 232


>gi|255008060|ref|ZP_05280186.1| putative endonuclease/exonuclease/phosphatase family protein
           [Bacteroides fragilis 3_1_12]
 gi|313145777|ref|ZP_07807970.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313134544|gb|EFR51904.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 285

 Score = 62.5 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 38/276 (13%), Positives = 76/276 (27%), Gaps = 31/276 (11%)

Query: 2   SVVTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52
           S V +AT+N+         NS + R   +  +I+E  PD++ +QE               
Sbjct: 25  SHVRLATFNIRYDNPGDSLNSWKYRKDRVCEFIREKQPDVLGMQEV--LHHQLEDLLAGL 82

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTH----LPGDDLDVQARFIEATFTINTQTLRI 108
            +Y     G++        +     +              +      +  +      +  
Sbjct: 83  PDYAYVGVGREDGKTQGEYAPVFYRKDKYDLLDSNTFWLSEHPDSVGKLGWDAACTRVAT 142

Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168
                           +     +    R  S  L +++    AG +  +       +   
Sbjct: 143 WAKLKEKSTGKEFLMVNTHFDHVGTEARRNSALLIIDKIKEIAGTHPSMMTGDFNVSEEW 202

Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDY-YADSWSKNKGIRIDHIM 227
                  + E                      T   Y+F D+       + K   ID I 
Sbjct: 203 EAYKTITSNEFILKDAWKIAAK---------QTGESYTFHDFGRVPVAEREK---IDFIF 250

Query: 228 LSPEATSLLHSARID-TKPRGWTKPSDHTPVIVSLD 262
           ++P+    +  A I  +     T  SDH   +  L+
Sbjct: 251 VTPQI--KVADAEIISSAITDSTYLSDHNAHLADLE 284


>gi|315502756|ref|YP_004081643.1| endonuclease/exonuclease/phosphatase [Micromonospora sp. L5]
 gi|315409375|gb|ADU07492.1| Endonuclease/exonuclease/phosphatase [Micromonospora sp. L5]
          Length = 265

 Score = 62.5 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 39/271 (14%), Positives = 79/271 (29%), Gaps = 19/271 (7%)

Query: 3   VVTVATWNVNSIRA---------RIHNLAAWIKENNPDIICLQETKTEDKNFP-FETLQS 52
           ++ V TWN   IR          R   + + +    PD++ LQE +  D           
Sbjct: 1   MLRVMTWN---IRTGGRDAGGTDRRDRIVSVVTAQRPDVLALQELRGMDATLGGLAGRLG 57

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           +  ++          V +     P+ ++           A       T            
Sbjct: 58  MTPYLARSCFGQPVAVLVR---PPLRVLRAGRVRRPFHHAAARVQVATGAGPLTVFSTHL 114

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
            P+       + D   + ++R     +        L    D+                  
Sbjct: 115 NPYSGGRRRMEADWLAAALRRTGGELALLAGDLNTLEPTADHTARLAGLATPYRRRHLRR 174

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
              T++ R   + L         R+  D     +    +  +     G+R+D+++ SP  
Sbjct: 175 DGRTVDTRAVARLLDAGLVDLWPRSGGDEPGGLTVPTRHGGAEF--AGMRLDYLLASPAL 232

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              + + R   +       SDH PV+  +D+
Sbjct: 233 ADRVRAVR-VVRDGDADSASDHYPVLAEVDL 262


>gi|103487806|ref|YP_617367.1| endonuclease/exonuclease/phosphatase [Sphingopyxis alaskensis
           RB2256]
 gi|98977883|gb|ABF54034.1| Endonuclease/exonuclease/phosphatase [Sphingopyxis alaskensis
           RB2256]
          Length = 231

 Score = 62.5 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 37/270 (13%), Positives = 65/270 (24%), Gaps = 53/270 (19%)

Query: 3   VVTVATWNVN-SI---RARIHN-LAAWIKENNPDIICLQE------TKTEDKNFPFETLQ 51
           ++ VA++N+   I   R R    + A ++E + DI+ LQE      T+      P    +
Sbjct: 1   MIKVASYNMRKGIGLDRRRDPGRVLAVLRELDADIVALQEADRRFGTRASA--IPPHMFE 58

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
             +              AI      + +      ++                 T+RIG+ 
Sbjct: 59  E-HSDYVPVDLLHGRPYAIGWHGNALLVRKGAEVEESHALHLPTLEPRGAVAATVRIGDT 117

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
            L             +    +  L                              P I   
Sbjct: 118 RLRVVGMHLDISGLRRRQQARAILH---------------------HIAEGEKLPTILMG 156

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
           D     +                           SF      +        +D I  SP+
Sbjct: 157 DCNEWRQTGGCLADFGAEHRLVDTGH--------SFHSRRPVAK-------LDRIFASPD 201

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
                  A +        + SDH P+    
Sbjct: 202 LDP--VDAGVHRSALAA-RASDHLPIWARF 228


>gi|73490255|dbj|BAE19808.1| bucentaur [Muntiacus reevesi]
          Length = 516

 Score = 62.5 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 38/291 (13%), Positives = 73/291 (25%), Gaps = 37/291 (12%)

Query: 6   VATWNVNSIRARIHNLAAWIKEN----NPDIICLQETKTE-DKNFPFETLQSLNYHIETC 60
           + TWNV S+          +K+     N DI+ + E K         +       H    
Sbjct: 247 IGTWNVRSMN---PGKLDVVKQEMERINIDILGISELKWTGMGELNSDD------HYIYY 297

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
             +       ++      +   + G +L                   I            
Sbjct: 298 CGQQSLRRNGVALIVNKRVRNAIIGCNLKNDRMISVRFQGKPFNLTVIQVYAPTPYAEEG 357

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
                 +       +      L +            IP     +   +        +E  
Sbjct: 358 EVYRFYEDLQHLLEITPKIDVLFIIGDWNAKVGSQEIPGITGRFGLGMQNEAGRRLIEFC 417

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
                  N            +  LY++         +     ID+I+      S + SA+
Sbjct: 418 H-----HNRLVITNTLFQQPSRRLYTWTSPDGRYRDQ-----IDYIICRQRWRSSVQSAK 467

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI----------PEPRKKQQDSTSQNMKPI 281
                 G    SDH  +I    +          P     ++D+T+++ K I
Sbjct: 468 TRP---GADCGSDHKLLIAKFRLKLKIIPKTTRPFRVTNEEDATNEDAKSI 515


>gi|147786908|emb|CAN62318.1| hypothetical protein VITISV_026527 [Vitis vinifera]
          Length = 1141

 Score = 62.5 bits (150), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 41/263 (15%), Positives = 79/263 (30%), Gaps = 39/263 (14%)

Query: 4   VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + +WNV  + +R     +  +++  NPD++ +QETK   +N     + S         
Sbjct: 1   MKIISWNVRGLGSRNKRRMVKDFLRSENPDVVMIQETK--KENCDRRFVGS------VWT 52

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
            ++ + VA+        I+      +L  +   I +       +L              +
Sbjct: 53  VRNKDWVALPVSGASGGILIIWDSKNLRREEVVIGSFSISVKFSLDGCGPLWISAVYGPN 112

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
           +    K  W++ F  +    L       F        +           +   F  E   
Sbjct: 113 SPSLRKDFWVELFDIYGLTYLLWCVGGDFNVIRRSSEKLGGSSLTPSMRDFDSFIRECEL 172

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT----SLLH 237
               L+N  FT +                           R+D  + S E        L 
Sbjct: 173 LDPPLRNASFTWSNMQESPVCK------------------RLDRFLYSNEWGLLFPQGLQ 214

Query: 238 SARIDTKPRGWTKPSDHTPVIVS 260
            A I        + SDH P+++ 
Sbjct: 215 EALI-------RRTSDHWPIVMD 230


>gi|182417077|ref|ZP_02948455.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           butyricum 5521]
 gi|237667663|ref|ZP_04527647.1| endonuclease/exonuclease/phosphatase [Clostridium butyricum E4 str.
           BoNT E BL5262]
 gi|182379086|gb|EDT76590.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           butyricum 5521]
 gi|237656011|gb|EEP53567.1| endonuclease/exonuclease/phosphatase [Clostridium butyricum E4 str.
           BoNT E BL5262]
          Length = 258

 Score = 62.1 bits (149), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 39/269 (14%), Positives = 80/269 (29%), Gaps = 21/269 (7%)

Query: 4   VTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           + V T+N+         N  + R H     I +   DII  QE    +  +      S N
Sbjct: 1   MKVMTFNLRCDFPLDINNRWKNRRHITYNIIDKYKCDIIGTQE--ATENMYKDIKKNSDN 58

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           Y+I      +        +   I I       +              +++   +      
Sbjct: 59  YNII----GTPRSRKFFVERNDILIKNENKIIESKTFWLSDTPDTVGSSKWFSVFPRICT 114

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
                 S K   ++         +    E E   +         +       +   N   
Sbjct: 115 TAVIELSNKVKIRVCNSHLDCFTSKA-REYELKRLMELIEEEQIKEDLPIIIMGDFNSGP 173

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
            +  ++     +       A++      ++ S    +     K KG+ ID+I +S E   
Sbjct: 174 DSKLIKNLSSGVYGSKKVSAVQEYDKRLYMNSTMSMFKG---KEKGLHIDYIFVSEEF-- 228

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            +++  I         PSDH P++  +++
Sbjct: 229 KVNNVEIVRYNENGKYPSDHYPLMAEIEL 257


>gi|222054058|ref|YP_002536420.1| Endonuclease/exonuclease/phosphatase [Geobacter sp. FRC-32]
 gi|221563347|gb|ACM19319.1| Endonuclease/exonuclease/phosphatase [Geobacter sp. FRC-32]
          Length = 258

 Score = 62.1 bits (149), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 47/280 (16%), Positives = 89/280 (31%), Gaps = 61/280 (21%)

Query: 6   VATWNVNS----------IRARIHNLAAWIKENNPDIICLQE-----TKT----EDKNFP 46
           V T+NV+S          +R     +A  I   +PDI+ LQE     T++    +     
Sbjct: 19  VMTYNVHSCIGMDGKVSPLR-----IAEVIAHYDPDIVALQELDAGLTRSDLVDQAHLIA 73

Query: 47  FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIE--ATFTINTQ 104
                S ++H     ++   G AILS++    +           +           +  +
Sbjct: 74  KSLEMSYHFHSSIQVEEGEYGNAILSRFPIHLVKGGALPTHPVNKNLERRGAVWAEVELK 133

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
            +R+  +    G        +                 +   P+I  GD+N +P      
Sbjct: 134 GIRVQVVATHLGLNRR----ERMCQANALSGPDWLGHPDCRPPVILCGDFNALPGSFVYR 189

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRID 224
           + I   +DA          +K +                                 +RID
Sbjct: 190 HFIRSLHDA---------HRKGRGRRLKGTWPVRLPL-------------------MRID 221

Query: 225 HIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
           ++ ++P+ T    SA     P      SDH P++ +L++ 
Sbjct: 222 YLFVTPDITVRRISA--HRTPLTMA-ASDHLPLVAALELS 258


>gi|326664783|ref|XP_003197885.1| PREDICTED: transposon TX1 uncharacterized 149 kDa protein-like
           [Danio rerio]
          Length = 1148

 Score = 62.1 bits (149), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 44/266 (16%), Positives = 87/266 (32%), Gaps = 33/266 (12%)

Query: 1   MSVVTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           M+ +T++T NV S+R+  R  ++ +++K    D+  LQE        PF      NY   
Sbjct: 10  MA-LTISTINVRSVRSPIRAQSVLSFLKLLKSDVFLLQEC-----ALPF----ISNYRKW 59

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
                    +   S     +    +     +        T   + +   +   +L     
Sbjct: 60  EDVWTPGPSLWSGSNQNKND---GVAILINNPNILVKGTTVVRDGRAFLVTLTFLGRDFN 116

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
           + +       +     L      +  + PL+ AGD+N I    D        +       
Sbjct: 117 VLNIYGHTDKNERYELLEDLQPHMLGKPPLVVAGDFNCILTQKDRKKADFKLDKT----- 171

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
                  +++    D  R  H     ++++   + S       RID+I  + +   +   
Sbjct: 172 STLLNHLVKDFKLVDCFRQVHPREEGFTWFSSDSTS-----ASRIDYIF-TRDFPPV--- 222

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIP 264
                     T  SDHT +  +L +P
Sbjct: 223 ----DATLTPTFFSDHTILSCTLSLP 244


>gi|326664774|ref|XP_003197881.1| PREDICTED: transposon TX1 uncharacterized 149 kDa protein-like
           [Danio rerio]
          Length = 1149

 Score = 62.1 bits (149), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 44/266 (16%), Positives = 87/266 (32%), Gaps = 33/266 (12%)

Query: 1   MSVVTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           M+ +T++T NV S+R+  R  ++ +++K    D+  LQE        PF      NY   
Sbjct: 10  MA-LTISTINVRSVRSPIRAQSVLSFLKLLKSDVFLLQEC-----ALPF----ISNYRKW 59

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
                    +   S     +    +     +        T   + +   +   +L     
Sbjct: 60  EDVWTPGPSLWSGSNQNKND---GVAILINNPNILVKGTTVVRDGRAFLVTLTFLGRDFN 116

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
           + +       +     L      +  + PL+ AGD+N I    D        +       
Sbjct: 117 VLNIYGHTDKNERYELLEDLQPHMLGKPPLVVAGDFNCILTQKDRKKADFKLDKT----- 171

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
                  +++    D  R  H     ++++   + S       RID+I  + +   +   
Sbjct: 172 STLLNHLVKDFKLVDCFRQVHPREEGFTWFSSDSTS-----ASRIDYIF-TRDFPPV--- 222

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIP 264
                     T  SDHT +  +L +P
Sbjct: 223 ----DATLTPTFFSDHTILSCTLSLP 244


>gi|21357231|ref|NP_647790.1| CG12034 [Drosophila melanogaster]
 gi|32172461|sp|Q9VZS6|NSMA_DROME RecName: Full=Putative neutral sphingomyelinase
 gi|15291739|gb|AAK93138.1| LD24865p [Drosophila melanogaster]
 gi|23092890|gb|AAF47741.2| CG12034 [Drosophila melanogaster]
 gi|220944946|gb|ACL85016.1| CG12034-PA [synthetic construct]
 gi|220954776|gb|ACL89931.1| CG12034-PA [synthetic construct]
          Length = 442

 Score = 62.1 bits (149), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 46/296 (15%), Positives = 84/296 (28%), Gaps = 52/296 (17%)

Query: 10  NVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDK----NFPFETLQSLNYHIE 58
           N+  I       R RI  +   +     DI+ LQE   ++         E +   +++  
Sbjct: 12  NIWGIPYVSSDRRPRIDAICKELASGKYDIVSLQEVWAQEDSELLQKGTEAVLPHSHYFH 71

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIE--------ATFTINTQTLRIGN 110
           +    +   V                                        +  Q + + N
Sbjct: 72  SGVMGAGLLVLSKYPILGTLFHAWSVNGYFHRIQHADWFGGKGVGLCRILVGGQMVHLYN 131

Query: 111 LY-LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
            +     +         ++       +F           I AGD N  PQ       +  
Sbjct: 132 AHLHAEYDNANDEYKTHRVIQAFDTAQFIEATRGNSALQILAGDLNAQPQDISYKVLLYT 191

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN-KGIRIDHIML 228
                           + +   +D+ R     H+ Y+       +  +N  GIRIDHI +
Sbjct: 192 SK--------------MLDSCDSDSFRTNECEHNSYT----SKQARERNPLGIRIDHIFV 233

Query: 229 SPEATSLLHSARI--------DTKPRGWTKPSDHTPVIVSLDI--PEPRKKQQDST 274
                  + +A I        +  P      SDH  V+  L +   EPR ++  +T
Sbjct: 234 RGG--DHV-NAEIAEYKLPFPERVPGEKFSFSDHEAVMAKLKLFKLEPRSEEPVAT 286


>gi|242208449|ref|XP_002470075.1| predicted protein [Postia placenta Mad-698-R]
 gi|220730827|gb|EED84678.1| predicted protein [Postia placenta Mad-698-R]
          Length = 1134

 Score = 62.1 bits (149), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 43/314 (13%), Positives = 87/314 (27%), Gaps = 55/314 (17%)

Query: 5    TVATWNV-------N-------------SIRARIHNLAAWIKENN-PDIICLQETKTEDK 43
             + +WNV       N                +R+  L   I  ++ PD +CLQE +    
Sbjct: 824  RILSWNVETPVPFLNLPPRKVGTSSVPPG--SRLSLLRELIARHDFPDFVCLQEVRAR-- 879

Query: 44   NFPFETLQSLN--------------YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLD 89
                E + +L               Y       +      +++  +    +      D D
Sbjct: 880  QSDKEWIVALKAAANKSDSGPKYTAYMSLNRALRGPRHFGVITYVKDAHKIAVSREVDWD 939

Query: 90   VQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLI 149
             + R I          L +  L             +   +  +R   F    ++  + + 
Sbjct: 940  AEGRVIILEMKSGWALLNVYALNGSEYFWRDPLGQNAPKTRNERKRDFNRLLMQECQAMR 999

Query: 150  FAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT------DAIRATHDTHH 203
              G   ++    +             T       +K  N  F       D  R  H    
Sbjct: 1000 ARGLRLVLIGDFNISLTKKDCVPRLRTEYPHSLARKEFNEEFIPTLDVVDVYREVHGQKA 1059

Query: 204  LYSFWDYYADSWSKNKGI---RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
             +S++        K +G    R+D+ ++       +               SDH P+ ++
Sbjct: 1060 AFSWF-----VKGKPQGADAARVDYALVQRTLMDRVIETMYHEDS-VERAHSDHAPLTLA 1113

Query: 261  L-DIPEPRKKQQDS 273
            L D+    ++    
Sbjct: 1114 LRDMDGLEEENDTV 1127


>gi|326678664|ref|XP_003201132.1| PREDICTED: transposon TX1 uncharacterized 149 kDa protein-like
           [Danio rerio]
          Length = 1102

 Score = 62.1 bits (149), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 38/265 (14%), Positives = 86/265 (32%), Gaps = 26/265 (9%)

Query: 1   MSVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           M  + V + N+N  R R     ++ +++    ++  LQET ++  N   E    + +  +
Sbjct: 27  MEQLRVGSLNINGGRDRKKLAVISEFLELKKINVAFLQETHSDCDN---EIEWDMWWGGK 83

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
                  N  A ++      +  ++       + R +     I        N+Y P+   
Sbjct: 84  LFLSHGSNNSAGVAILISKNLNANILLVKEIEKGRILYTKIEIEGFLFGFINVYAPNNGS 143

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
              + +          L    + +E    ++  GD+N           +    +      
Sbjct: 144 ERVSFFM--------KLNEFLKGVEEGVCIVLGGDWNC-----TTDFTVDRNGEEPHNQS 190

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
                + ++  G  D  R  +     Y++     +      G R+D   +     + +  
Sbjct: 191 SIVLSRIMKKNGLVDIWRLRNKEERQYTWVKVTDNMV---HGARLDRFYVGQIWNNRVIK 247

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263
           A I       T  SDH  + + L++
Sbjct: 248 AFI-----SPTAFSDHHMIGLELNM 267


>gi|320535908|ref|ZP_08035979.1| endonuclease/exonuclease/phosphatase family protein [Treponema
           phagedenis F0421]
 gi|320147245|gb|EFW38790.1| endonuclease/exonuclease/phosphatase family protein [Treponema
           phagedenis F0421]
          Length = 255

 Score = 62.1 bits (149), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 41/266 (15%), Positives = 76/266 (28%), Gaps = 24/266 (9%)

Query: 4   VTVATWNV------NSIRA---RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           + + T+N+      +   A   R  N+   I  + PDII  QE       +  E      
Sbjct: 1   MKIVTFNIRYDNPDDGKNAFIHRKSNIIEAINAHKPDIIGFQEVLPHVSAWLKEQFPEYY 60

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           +      +   +   +L   +    + H     L    +   + +T  +   RI    + 
Sbjct: 61  FIGHGRSENFSDEHIVLGYKKMDYQLHHFRTFWLSPTPQVPGSRYTEQSICPRICIHAIF 120

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
             +           S     L        ++       D +   +P      +   N   
Sbjct: 121 ETDR------HRLFSVYNTHLDHEGVDARVKALQQIMQDIDSFSKPTLPTVLMGDFNAKP 174

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
              E+    +        +            SF D+   +  K     ID+I  +PE   
Sbjct: 175 TDEELHVLKEFKIKENDKNLQLNDLTKDIRGSFHDFGNCTPEK-----IDYIFATPEFL- 228

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVS 260
            L +  +     G    SDH P+ V 
Sbjct: 229 -LQNYSVWENKAG--FLSDHYPLEVE 251


>gi|300774457|ref|ZP_07084320.1| AP endonuclease domain protein [Chryseobacterium gleum ATCC 35910]
 gi|300506272|gb|EFK37407.1| AP endonuclease domain protein [Chryseobacterium gleum ATCC 35910]
          Length = 261

 Score = 62.1 bits (149), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 42/263 (15%), Positives = 79/263 (30%), Gaps = 37/263 (14%)

Query: 4   VTVATWNVNSIRARI-----HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           + V ++N      R        +  ++K  + D+  LQE               + YH +
Sbjct: 26  IKVVSFN-----TRAGGRGNEGVGPYLKSQDADVFLLQE------------DAGIKYHFD 68

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
              + +  G   +     I     +   D DV+   + A   I  +T R  ++YL     
Sbjct: 69  GYQKANPGGGLTILTKHKIIKQQIIDPQDEDVRIPGVLADIEIKGRTYRFIDVYLNPFRF 128

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
                  +  +           +  +           +I +  +     +       ++ 
Sbjct: 129 EKDMVKLNGDTDTDEQKIKDVIKRLIPTFKKHQDQVALIREAIENSPYPVILAGDFNSVP 188

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
               +  L +      + A   +    SF DY          IRID++  S        S
Sbjct: 189 NSYEYYHLSDGLEDTFLTAGKGSAT--SFHDYKFP-------IRIDYVFSSKSL--KAIS 237

Query: 239 ARIDTKPRGWTKPSDHTPVIVSL 261
            ++D         SDH PVIV  
Sbjct: 238 YKVDRSV----SISDHYPVIVKF 256


>gi|298293932|ref|YP_003695871.1| endonuclease/exonuclease/phosphatase [Starkeya novella DSM 506]
 gi|296930443|gb|ADH91252.1| Endonuclease/exonuclease/phosphatase [Starkeya novella DSM 506]
          Length = 269

 Score = 62.1 bits (149), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 42/273 (15%), Positives = 80/273 (29%), Gaps = 59/273 (21%)

Query: 4   VTVATWNVNS-----IRARIHNLAAWIKENNPDIICLQETKTEDKNFP-FETLQSLNYHI 57
           + + TWN++       R  +  +A+ + ++ PD++ LQE  T  ++      L+ L+ H 
Sbjct: 10  LRLMTWNIHGGIGPDRRFDLDRIASLVAKHAPDVLALQEIDTRGRDIDCLAPLRGLDIHH 69

Query: 58  E-----TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
                       + G A+ S++   ++V H            IE         L +  ++
Sbjct: 70  FTEARTIAVPDGHYGHALFSRWPTSDVVLHDLSVWRYEPRIAIETQIATPFGPLHLVAVH 129

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
              G  I   +    +             + + +   +     +                
Sbjct: 130 --LGLFIFERRRQAGMLAAMARRVRGMPTVMMGDFNDWFSFGQVT--------------- 172

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                  R     L          A                       +R+D +  S   
Sbjct: 173 -------RTMSHVLPERTRLRTFPAQKPA-------------------LRLDRVYCSAP- 205

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
             +L  A  D   R     SDH P+IV L +P 
Sbjct: 206 -GMLADAFTDPAARAI---SDHLPIIVDLALPA 234


>gi|262405075|ref|ZP_06081625.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|294643581|ref|ZP_06721385.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           ovatus SD CC 2a]
 gi|294808680|ref|ZP_06767414.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           xylanisolvens SD CC 1b]
 gi|262355950|gb|EEZ05040.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|292641076|gb|EFF59290.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           ovatus SD CC 2a]
 gi|294444119|gb|EFG12852.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           xylanisolvens SD CC 1b]
          Length = 316

 Score = 62.1 bits (149), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 46/302 (15%), Positives = 87/302 (28%), Gaps = 45/302 (14%)

Query: 2   SVVTVATWNV-----------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETL 50
           + +TVA++N+           N    R   +A  ++ ++ DI   QE          E L
Sbjct: 26  TSITVASYNLRNANGGDSINGNGWGQRYPVIAQIVQYHDFDIFGTQECFIHQLKDIKEAL 85

Query: 51  QSLNY-HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
              +Y  +     K     + +        V       L          +      +   
Sbjct: 86  PGYDYIGVGRDDGKEKGEHSAIFYRTDKFDVIEKGDFWLSKTPDVPSKGWDAVLPRICSW 145

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
             +           ++  +  I +  R  S  L  ++         +             
Sbjct: 146 GHFKCKDTGFEFLFFNLHMDHIGKKARVESAFLVQDKMKELGKGKELP----AILTGDFN 201

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
            +    + +   S   L +       R   +     +F D+  +S+++    RIDHI +S
Sbjct: 202 VDQTHQSYDAFVSKGVLCDSYEKAGFRYAING----TFNDFDPNSFTE---SRIDHIFVS 254

Query: 230 PEA--------------------TSLLHSA--RIDTKPRGWTKPSDHTPVIVSLDIPEPR 267
           P                          +     ID K      PSDH PV V L+  + +
Sbjct: 255 PSFQVKRYGVLTDTYRSIVGKGEKKQANDCPEEIDIKTYQARTPSDHFPVKVELEFDQRQ 314

Query: 268 KK 269
           +K
Sbjct: 315 QK 316


>gi|307180084|gb|EFN68152.1| Putative neutral sphingomyelinase [Camponotus floridanus]
          Length = 360

 Score = 62.1 bits (149), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 46/277 (16%), Positives = 82/277 (29%), Gaps = 30/277 (10%)

Query: 6   VATWNVNSI----RARIHNLAAWIKE---NNPDIICLQETKTEDK--NFPFETLQSLNYH 56
           + T N   I    + RI  ++A  ++      DIICLQE  + +       +  + L Y 
Sbjct: 9   ILTLNCWGIPYVSKNRITRMSAIAEKCASREYDIICLQEVWSVEDFKVIKAKVQEILPYS 68

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT---QTLRIGNLYL 113
                    +GV ILS+Y   +++ H    +  V        F         ++I N+ +
Sbjct: 69  HYFYSGVVGSGVCILSRYPIYDVMFHKWPLNGYVHKIHHGDWFGGKGVGLCKIKILNMNI 128

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
                    +Y+ +           +        +   G   +I        P       
Sbjct: 129 NVYTAHLHAEYNRENDEYMAHRVLQAFDTAQFVRMTSGGADAVILAGDLNTEPQDLAYRI 188

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
              +                   A +     Y+       + ++  G RIDHI+      
Sbjct: 189 IRGVGGLMDACPSSASHIGTNECANN----SYTC---SKFARTRPDGKRIDHILY---LG 238

Query: 234 SLLHSARI--------DTKPRGWTKPSDHTPVIVSLD 262
           S      I        +  P      SDH  V+ +L 
Sbjct: 239 SKSVKVEITNFQHPLPNRVPYKDFSYSDHEAVMATLK 275


>gi|281424726|ref|ZP_06255639.1| AP endonuclease domain protein [Prevotella oris F0302]
 gi|281401096|gb|EFB31927.1| AP endonuclease domain protein [Prevotella oris F0302]
          Length = 363

 Score = 62.1 bits (149), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 37/267 (13%), Positives = 74/267 (27%), Gaps = 23/267 (8%)

Query: 4   VTVATWNVNSIRARIHN------LAAWIKENNPDIICLQETKTED-KNFPFETLQSLNYH 56
           + V ++NV S      +      +  +I+E   DI+CLQE  T +      +++ +  Y 
Sbjct: 101 IKVMSYNVWSFAGWERHADGKFPILEYIREQQADILCLQEAMTNEIGQARVDSVLNKIYA 160

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
            +   + S +   I    +   +                      N   + + N     G
Sbjct: 161 YKDTMKFSPSSDCIALYSRYPIVSHERIVYPSRGNLSGAFEIKIGNDTVIVVNNHLETTG 220

Query: 117 --NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
             N             +       +    +++    +    +       Y     +    
Sbjct: 221 LSNEDKREFKSMVKGNLLTSDAKQASYRLIDKLGEASAKRAVQADAVARYISKHSDRSMI 280

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI--RIDHIMLSPEA 232
              +   S            +              Y+      N G+  RIDHIM S + 
Sbjct: 281 VCGDFNDSPISYARHTIAKGLTDCFIATGNGLGVSYH------NGGMYVRIDHIMCSKDW 334

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIV 259
                  ++D         SDH P++ 
Sbjct: 335 QPY--GCKVDRSI----GESDHYPILC 355


>gi|254445739|ref|ZP_05059215.1| endonuclease/exonuclease/phosphatase family [Verrucomicrobiae
           bacterium DG1235]
 gi|198260047|gb|EDY84355.1| endonuclease/exonuclease/phosphatase family [Verrucomicrobiae
           bacterium DG1235]
          Length = 278

 Score = 62.1 bits (149), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 36/270 (13%), Positives = 75/270 (27%), Gaps = 33/270 (12%)

Query: 4   VTVATWNVNSIRA------------RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51
           +T++T+N   +R             R   +A  I    PDI+ +QE     +   +    
Sbjct: 22  LTLSTYN---LRLEIASDGPNQWENRREQVANQIAFLAPDILGVQE--ALPQQVDYLEQN 76

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
              Y     G+         S             + LD    ++  T    +    +   
Sbjct: 77  LAGYSYIGVGRHDGIRAGEHSAIYY----RDSTTELLDSSTFWLSPTPDTPSYGWGVHYR 132

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
            +         +                    L    +       +  P++ +  +   N
Sbjct: 133 RICTYGHFRDRQTKTTYWVFNTHFDHEMPEARLNGAKLILDRIATLVSPNEPHFLMGDLN 192

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG--IRIDHIMLS 229
               +  ++    KLQ+                        +++        RID+I  S
Sbjct: 193 ATPDSPPIKLISAKLQDTRLHSTGPVFGSEGT--------FNAFDPTTIPTRRIDYIFAS 244

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
           PE  + + +    +       PSDH P+++
Sbjct: 245 PE--NTITAYATLSDLIDGRYPSDHFPIVI 272


>gi|241206881|ref|YP_002977977.1| endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240860771|gb|ACS58438.1| Endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 288

 Score = 61.7 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 47/301 (15%), Positives = 95/301 (31%), Gaps = 58/301 (19%)

Query: 4   VTVATWNVN---SIRARIHNLAAWIKE--NNPDIICLQETKTEDKNFPFETLQSL----- 53
           +  A++N+     +  R     A I       D+I LQE     + F       +     
Sbjct: 1   MNFASYNIQYGFGLDGRYD--LARIARSLEGADVIALQEV---TRGFSRNGFADMAADVA 55

Query: 54  ----NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
               +Y          +  A    +QP+       G+ +  +   +     +  ++  IG
Sbjct: 56  AFFPDYFWVYGPACDMHVEADEGGFQPVRGTRFQFGNMVLSRWPVVSTRTLLLPRSRTIG 115

Query: 110 NLYLPHGN-----------------PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG 152
            + L  G                   +     D++I  ++      +  ++    L   G
Sbjct: 116 KINLQRGATEAVIDAPGAAIRVYSVHLDHVSADERIRQLEFLNAHINAFVQEGGSLTGGG 175

Query: 153 DYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHD----------TH 202
           ++++   P      I+ + +         +        +    R              + 
Sbjct: 176 EFDLPEPPLPEDYVIMGDFNMEPESPEYCALAGAGGGYYGRVARIGTPVDAFAALEAYSP 235

Query: 203 HLYSFWDYYADSWSKNKGIR--IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
             YS+ D       ++ G R  +D+  +S    S L SARIDT+    +  SDH P+ V 
Sbjct: 236 ESYSWMD------PEDHGKRMHLDYCFVSCGLQSRLKSARIDTQ----SVASDHFPLWVE 285

Query: 261 L 261
           +
Sbjct: 286 I 286


>gi|229824863|ref|ZP_04450932.1| hypothetical protein GCWU000182_00212 [Abiotrophia defectiva ATCC
           49176]
 gi|229790866|gb|EEP26980.1| hypothetical protein GCWU000182_00212 [Abiotrophia defectiva ATCC
           49176]
          Length = 258

 Score = 61.7 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 41/275 (14%), Positives = 74/275 (26%), Gaps = 35/275 (12%)

Query: 1   MSVVTVATWNV------NSIRA---RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51
           M  + + T+N+      + I     R   +   +    PDIIC QE        P     
Sbjct: 1   MGDIKLVTFNIRCDYEQDGINNFAFRKPLIVDKVNSTQPDIICFQEV------LP----- 49

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT-QTLRIGN 110
               H+    + ++    I+   +  +                +    T    +T  I  
Sbjct: 50  ----HVAVWLKATFTDYYIVGCGRSEDFADEQEAIAFKKDRFNLVNMSTFWMSETPYIPG 105

Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170
                 +       +  +  I     F      L+     A    +          II+ 
Sbjct: 106 SRYKKQSTCPRVTTEVVLYDIAEKNMFRLLNTHLDHEGSEARLLGLNQLLKKIDEEIIFP 165

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL--YSFWDYYADSWSKNKGIRIDHIML 228
           +          +      M         +D      ++F DY   +  K     ID+I +
Sbjct: 166 DIPVIIAGDFNAEPDSPEMQAVITSEKYYDLTAGIDFTFHDY-GKTKEK-----IDYIFV 219

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           S   T            +     SDH P+ V + I
Sbjct: 220 SRNIT--CKKTEKWDDVKNGVYISDHYPIQVDISI 252


>gi|162453061|ref|YP_001615428.1| hypothetical protein sce4785 [Sorangium cellulosum 'So ce 56']
 gi|161163643|emb|CAN94948.1| probable secreted protein [Sorangium cellulosum 'So ce 56']
          Length = 286

 Score = 61.7 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/275 (13%), Positives = 77/275 (28%), Gaps = 25/275 (9%)

Query: 2   SVVTVATWNV-NSIR-----ARIHNLAAWIKENNPDIICLQETKTEDK-NFPFETLQSLN 54
           S + V T N+ N  R     AR+  +   ++E +PD++ LQE  + +  +        L 
Sbjct: 24  SSLRVLTLNIWN--RHDPWEARLEVIREGLRELDPDVVGLQEVLSYEGRSLADGIADGLG 81

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           Y +         G  +                         E    +             
Sbjct: 82  YEVAFGAAHDLGGGVLFGNAVLSRWPIARSQAFPLPTGETDEKRSIL----------LAE 131

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
            G+P  +  +       K       +        I   +  +   P         + +A 
Sbjct: 132 LGSPHGAIPFFVTHLNWKFHHGAVREAQVAAVADIVMREAPMEGLPPIVVGDFNAQPEAT 191

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYY--ADSWSKNKGIRIDHIML-SPE 231
               ++      Q   +             ++F        + +     RID++ +  P+
Sbjct: 192 EIRFMKGLHALNQKSVYFADTFDQTGKGPGFTFDPVRNPFAAITNEYPRRIDYVFVRGPD 251

Query: 232 ATSL---LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           A      L S  +  + R     SDH  V+  + +
Sbjct: 252 AQGRGKPLSSRVVFEEIRNGVAASDHYGVLSEISM 286


>gi|32306454|dbj|BAC78521.1| Bcnt [Giraffa camelopardalis]
          Length = 378

 Score = 61.7 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/291 (13%), Positives = 72/291 (24%), Gaps = 37/291 (12%)

Query: 6   VATWNVNSIRARIHNLAAWIKEN----NPDIICLQETKTE-DKNFPFETLQSLNYHIETC 60
           + TWNV S+          +K+     N DI+ + E K         +       H    
Sbjct: 101 IGTWNVRSMN---PGKLDVVKQEMERINIDILGISELKWTGMGELNSDD------HYIYY 151

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
             +       ++      +   + G +L                   I            
Sbjct: 152 CGQQSLRRNGVALIVNKRVRNAIIGCNLKNDRMISVRFQGKPFNLTVIQVYAPTPYAEEG 211

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
                 +       +      L +            IP     +   +        +E  
Sbjct: 212 EVYRFYEDLQHLLEITPKIDVLFIIGDWNAKVGSQEIPGITGRFGLGMQNEAGRRLIEFC 271

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
                  N            +  LY++         +     ID+I+      S + SA+
Sbjct: 272 H-----HNRLVITNTLFQQPSRRLYTWTSPDGRYRDQ-----IDYIICRQRWRSSVQSAK 321

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI----------PEPRKKQQDSTSQNMKPI 281
                 G    SDH  +I    +          P     ++D+T++  K I
Sbjct: 322 TRP---GADCGSDHKLLIAKFRLKLKIIPKTTRPFRVTNEEDATNEETKSI 369


>gi|269865178|ref|XP_002651832.1| exodeoxyribonuclease III [Enterocytozoon bieneusi H348]
 gi|220063793|gb|EED42224.1| exodeoxyribonuclease III [Enterocytozoon bieneusi H348]
          Length = 298

 Score = 61.7 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/298 (13%), Positives = 79/298 (26%), Gaps = 58/298 (19%)

Query: 3   VVTVATWNVNSIRARIH----NLAAWIKENNPDIICLQETKTED----KNFPFETL---- 50
           +V +   NVN IR+           W+     DI C QE +  +      F  +      
Sbjct: 1   MVKIFCLNVNGIRSFEKFHKIPFNNWLLGLGYDIYCFQEIRGNEVSLRYLFTLDDFCTFA 60

Query: 51  ---------------QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFI 95
                          +  NY   T   +    +  +     +         D  +    +
Sbjct: 61  SFHSRAGRHGVATLVRKDNYCCATEEVRKGRILKTIHSNFVLYNCYMPYCSDESLIEAVM 120

Query: 96  EATFTINT------QTLRI--------GNLYLPHGNPITSTKYDDKISWIKRFLRFASQR 141
           E    +          + I         ++   +       +      W       +   
Sbjct: 121 ETYDKLTDVLNKEQHPVVILCGDMNATYSMCDNYLYMREYEQLHYVSEWSMSIDHISKVE 180

Query: 142 LELEEPLIFAGDYNIIPQ-----------------PHDCYNPIIWENDACFTLEVRQSFQ 184
             ++   +   D+ +  Q                     Y    ++    F  + ++ + 
Sbjct: 181 NPIQRGKLHTRDFYMKLQMSSENGIYTEKVAPRIDELPVYFLTKYDLYDHFMEKRQRQWL 240

Query: 185 KLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
                 F D  R  +     Y+ WD        N G RID+I+L   +   + SA+ D
Sbjct: 241 ANLMKTFVDTFRIGNKELFQYTCWDRVLRHRESNLGTRIDYILLKTTSHYKIKSAKSD 298


>gi|283778620|ref|YP_003369375.1| endonuclease/exonuclease/phosphatase [Pirellula staleyi DSM 6068]
 gi|283437073|gb|ADB15515.1| Endonuclease/exonuclease/phosphatase [Pirellula staleyi DSM 6068]
          Length = 309

 Score = 61.7 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/263 (13%), Positives = 73/263 (27%), Gaps = 34/263 (12%)

Query: 25  IKENNPDIICLQETKTEDKNFPFETL---QSLN----YHIETCGQKSYNGVAILSKYQPI 77
           IKE N DII  QE     +N         Q L     Y      + +   +  ++     
Sbjct: 57  IKEANADIIAFQEV----ENLDVLKRFRNQYLGGFKSYPHAVLIEGNDPRLIDVAVLSRE 112

Query: 78  EIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF 137
           +           V+A      F  +   L +          +        +   +     
Sbjct: 113 KFPIVSTRSHHHVKANATSRGFVFSRDCLEVDIEVGSQTLTLFVNHLK-SMMGGRDQTHE 171

Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA 197
             +        +    +   P  +         +      +     + L      + +  
Sbjct: 172 RRKLQSTWVKKLVNQRFGTDPGNNPFIVLGDLNDYLDSASDPDSGIRNLVKWNQVENVIE 231

Query: 198 THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI-----------DTKPR 246
                  ++   Y+      N+  ++D++++S   +S + S  I            T PR
Sbjct: 232 RLPAAERWTH--YWNGG---NEYRQLDYLLVSKSLSSAVQSVEIIRGGLPTRATNYTGPR 286

Query: 247 ------GWTKPSDHTPVIVSLDI 263
                    K SDH P++V L +
Sbjct: 287 FPGVGTNDPKASDHCPIVVELKL 309


>gi|237715231|ref|ZP_04545712.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|237719602|ref|ZP_04550083.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|229444540|gb|EEO50331.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|229450871|gb|EEO56662.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
          Length = 314

 Score = 61.7 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 46/302 (15%), Positives = 87/302 (28%), Gaps = 45/302 (14%)

Query: 2   SVVTVATWNV-----------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETL 50
           + +TVA++N+           N    R   +A  ++ ++ DI   QE          E L
Sbjct: 24  TSITVASYNLRNANGGDSINGNGWGQRYPVIAQIVQYHDFDIFGTQECFIHQLKDIKEAL 83

Query: 51  QSLNY-HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
              +Y  +     K     + +        V       L          +      +   
Sbjct: 84  PGYDYIGVGRDDGKEKGEHSAIFYRTDKFDVIEKGDFWLSKTPDVPSKGWDAVLPRICSW 143

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
             +           ++  +  I +  R  S  L  ++         +             
Sbjct: 144 GHFKCKDTGFEFLFFNLHMDHIGKKARVESAFLVQDKMKELGKGKELP----AILTGDFN 199

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
            +    + +   S   L +       R   +     +F D+  +S+++    RIDHI +S
Sbjct: 200 VDQTHQSYDAFVSKGVLCDSYEKAGFRYAING----TFNDFDPNSFTE---SRIDHIFVS 252

Query: 230 PEA--------------------TSLLHSA--RIDTKPRGWTKPSDHTPVIVSLDIPEPR 267
           P                          +     ID K      PSDH PV V L+  + +
Sbjct: 253 PSFQVKRYGVLTDTYRSIVGKGEKKQANDCPEEIDIKTYQARTPSDHFPVKVELEFDQRQ 312

Query: 268 KK 269
           +K
Sbjct: 313 QK 314


>gi|160878851|ref|YP_001557819.1| endonuclease/exonuclease/phosphatase [Clostridium phytofermentans
           ISDg]
 gi|160427517|gb|ABX41080.1| Endonuclease/exonuclease/phosphatase [Clostridium phytofermentans
           ISDg]
          Length = 258

 Score = 61.7 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 83/274 (30%), Gaps = 33/274 (12%)

Query: 4   VTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQE-----TKTEDKNFPFET 49
           + V T+N+         N+ + R   +   +K+ N DI+C QE      K   +N     
Sbjct: 1   MKVVTFNIRCDYNQDGNNNFQYRKELILQKLKKENADIVCFQEALPHVVKWLKENLED-- 58

Query: 50  LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
                Y+I +CG++        +     E    +  +   +             Q++   
Sbjct: 59  -----YYILSCGREKDLKGEQNTVAFKKEKYQLISMNTFWLSLTPDVPGTRYENQSMCPR 113

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC-YNPII 168
           ++       + + K    ++         ++ L +++ L          +        +I
Sbjct: 114 SVTEVFLQDLETEKLYYLLNTHLDHEGSEARVLGMQQILKHMSGVAEQKKQAGFGKVEMI 173

Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
              D        +     ++    D       T H +           K     ID+I++
Sbjct: 174 LTGDFNGYPNSEEISLIAKSEFLRDLTSGMEGTFHDFG----RMQPAEK-----IDYIVV 224

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
           S            D +       SDH PV V L+
Sbjct: 225 SSGLKCCTRELWTDCE--NGVFLSDHYPVSVVLE 256


>gi|29348040|ref|NP_811543.1| hypothetical protein BT_2630 [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|260172059|ref|ZP_05758471.1| hypothetical protein BacD2_09356 [Bacteroides sp. D2]
 gi|293371640|ref|ZP_06618051.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           ovatus SD CMC 3f]
 gi|315920369|ref|ZP_07916609.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|29339942|gb|AAO77737.1| conserved hypothetical protein with
           endonuclease/exonuclease/phosphatase family domain
           [Bacteroides thetaiotaomicron VPI-5482]
 gi|292633337|gb|EFF51907.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           ovatus SD CMC 3f]
 gi|313694244|gb|EFS31079.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 316

 Score = 61.7 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 46/302 (15%), Positives = 87/302 (28%), Gaps = 45/302 (14%)

Query: 2   SVVTVATWNV-----------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETL 50
           + +TVA++N+           N    R   +A  ++ ++ DI   QE          E L
Sbjct: 26  TSITVASYNLRNANGGDSINGNGWGQRYPVIAQIVQYHDFDIFGTQECFIHQLKDMKEAL 85

Query: 51  QSLNY-HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
              +Y  +     K     + +        V       L          +      +   
Sbjct: 86  PGYDYIGVGRDDGKEKGEHSAIFYRTDKFDVIEKGDFWLSETPDVPSKGWDAVLPRICSW 145

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
             +           ++  +  I +  R  S  L  ++         +             
Sbjct: 146 GHFKCKDTGFEFLFFNLHMDHIGKKARVESAFLVQDKMKELGKGKELP----AILTGDFN 201

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
            +    + +   S   L +       R   +     +F D+  +S+++    RIDHI +S
Sbjct: 202 VDQTHQSYDAFVSKGVLCDSYEKAGFRYAING----TFNDFDPNSFTE---SRIDHIFVS 254

Query: 230 PEA--------------------TSLLHSA--RIDTKPRGWTKPSDHTPVIVSLDIPEPR 267
           P                          +     ID K      PSDH PV V L+  + +
Sbjct: 255 PSFQVKRYGVLTDTYRSIVGKGEKKQANDCPEEIDIKTYQARTPSDHFPVKVELEFDQRQ 314

Query: 268 KK 269
           +K
Sbjct: 315 QK 316


>gi|256839005|ref|ZP_05544515.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|256739924|gb|EEU53248.1| conserved hypothetical protein [Parabacteroides sp. D13]
          Length = 365

 Score = 61.7 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 42/284 (14%), Positives = 78/284 (27%), Gaps = 43/284 (15%)

Query: 3   VVTVATWNV------NSIRARIHNLAAWIKENNPDIICLQET------KTEDKNFPFETL 50
           V+ V T+NV      N  +   + +  +I  ++ DI+CLQE       K+   +  ++ L
Sbjct: 101 VLKVLTYNVMAFGYKNHTKIAPNKIIQYIANSDADIVCLQEYATAKSEKSLTASKIYDAL 160

Query: 51  QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
               Y        +      ++ +    +                     I  + L + N
Sbjct: 161 SMYPYRSVFYQSSTKFQSFGIAVFSKYPLSNSRMVKYDSDYNGSSVHEVNIKGKKLTLIN 220

Query: 111 LYLPHGNPITSTKYDDK-----------ISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159
            +L         +                     F +       +      A    I   
Sbjct: 221 NHLESFKLTMEDRTRYSSLIKSFSSDGLDDLKGAFEQKLGPAFRIRAKQAEAVSKEIKNA 280

Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK 219
             D        ND   +   R     L +             +  + ++           
Sbjct: 281 KGDYVLVCGDFNDTPISYAHRTIQGDLMDAFAESGRGMGITYNQNFFWF----------- 329

Query: 220 GIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             RID+I+ SP  TS   +  +D         SDH P+   L +
Sbjct: 330 --RIDNILHSPNMTS--MNCSVDKVAY-----SDHYPLWCYLKL 364


>gi|294932897|ref|XP_002780496.1| ap endonuclease, putative [Perkinsus marinus ATCC 50983]
 gi|239890430|gb|EER12291.1| ap endonuclease, putative [Perkinsus marinus ATCC 50983]
          Length = 395

 Score = 61.7 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 43/332 (12%), Positives = 95/332 (28%), Gaps = 62/332 (18%)

Query: 3   VVTVATWNVNSIRARIHN------LAAWIKENNPDIICLQETKT------EDKNFPF--- 47
            + +  WN +S+  RI N      +A  +K+++ +++C+ E +                 
Sbjct: 34  TIRLMAWNADSLLNRIKNKETAKEIAKVVKDHDVNVLCVCEVRMACESCSSTGAIDRVNS 93

Query: 48  --ETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT 105
                + L  +  T           L   +   +   +       +  F      +    
Sbjct: 94  NQGAERDLVVNFLTRQCGFDQLYFSLRNIKQAGVGMFMRKMPKPDRVHFKIPGTEVGGDG 153

Query: 106 LRIGNLYLPHGNP----------------ITSTKYDDKISWIKRFLRFASQRLELEEPLI 149
                  +   +                  T   +  +  +      F +      E +I
Sbjct: 154 FHHPEGRIILADFASENLQLLLTYVPNNGWTEDSFAKRRRFDCEVKSFLANAKSQGERII 213

Query: 150 FAGDYNIIPQPHDCYNPIIWENDACFTL---------------EVRQSFQKLQNMGFTDA 194
           + GD N+    +D      W      +                E  +  + L+  G  D+
Sbjct: 214 WLGDLNVAASWNDVGPNPAWFRRQKQSPGLCDDDVGQPGFTQAEQNRFAELLEAGGLIDS 273

Query: 195 IRATHDTHHLY---SFWDYYAD-------SWSKNKGIRIDHIMLSPEATSLLHSAR---I 241
            R  H         ++                  KG+RID++++       + S     I
Sbjct: 274 YRQCHHEEDWEKDATWRGAPGKPPNPPEFGRFYGKGMRIDYVLVPESMKDDILSVENLGI 333

Query: 242 DTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDS 273
             + R     SDH P++ ++ + +P    +D 
Sbjct: 334 GKE-RKGFMGSDHAPLLAAIKVSQPAVLSEDP 364


>gi|220917964|ref|YP_002493268.1| Endonuclease/exonuclease/phosphatase [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|219955818|gb|ACL66202.1| Endonuclease/exonuclease/phosphatase [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 261

 Score = 61.7 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/266 (13%), Positives = 71/266 (26%), Gaps = 34/266 (12%)

Query: 5   TVATWNVNSIRAR-----IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
            V TWNV+ +R          +A  + +   D+  LQE        P     +       
Sbjct: 4   RVVTWNVHGLRGAGRRPDPERIARVLDDIGADVAGLQEVGAR---LPGADAHAA---EAL 57

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
                 NG    +                           ++  +  R          P+
Sbjct: 58  ARLTGLNGAFGPTLQHARGFAYGNAILSRHPIDATRTYDLSVPGREPRGCLRADLDLGPM 117

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
               +   +    R  R  +  L              I +     +P++   D     + 
Sbjct: 118 RVHVFAAHLGLHWRERRRQAAALLS----------ADILRDAALSHPLVLVGDFNSPSDR 167

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
               + L+      A+ A        S W            +R+D   +       + + 
Sbjct: 168 SAVPRWLRRTLTDCAVAAGRPAATFPSAWPL----------LRLDRAYVDAAL--RVLAC 215

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPE 265
            +   P    + SDH P++V L++ E
Sbjct: 216 EVIRTPLAR-RASDHLPLVVELELTE 240


>gi|20196208|dbj|BAB90842.1| bucentaur [Cervus nippon]
          Length = 369

 Score = 61.7 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/289 (12%), Positives = 71/289 (24%), Gaps = 37/289 (12%)

Query: 6   VATWNVNSIRARIHNLAAWIKEN----NPDIICLQETKTE-DKNFPFETLQSLNYHIETC 60
           + TWNV S+          +K+     N DI+ + E K         +       H    
Sbjct: 103 IGTWNVRSMN---PGKLDVVKQEMERINIDILGISELKWTGMGELNSDD------HYIYY 153

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
             +       ++      +   + G +L                   I            
Sbjct: 154 CGQQSLRRNGVALIVNKRVRNAIIGCNLKNDRMISVRFQGKPFNLTVIQVYAPTPYAEEG 213

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
                 +       +      L +            IP     +   +        +E  
Sbjct: 214 EVYRFYEDLQHLLEITPKIDVLFIIGDWNAKVGSQEIPGITGRFGLGMQNEAGRRLIEFC 273

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
                  N            +  LY++         +     ID+I+      S + SA+
Sbjct: 274 H-----HNRLVITNTLFQQPSRRLYTWTSPDGRYRDQ-----IDYIICRQRWRSSVQSAK 323

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI----------PEPRKKQQDSTSQNMK 279
                 G    SDH  +I    +          P     ++D+T++  K
Sbjct: 324 TRP---GADCGSDHKLLIAKFRLKLKIIPKTTRPFRVTNEEDATNEEAK 369


>gi|291298430|ref|YP_003509708.1| endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis
           DSM 44728]
 gi|290567650|gb|ADD40615.1| Endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis
           DSM 44728]
          Length = 289

 Score = 61.7 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/251 (12%), Positives = 66/251 (26%), Gaps = 36/251 (14%)

Query: 18  IHNLAAWIKENNPDIICLQET-----KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILS 72
           +  +A  I+  N D+I LQE      +++  + P    + L  H+     +         
Sbjct: 70  LERIARRIEALNVDVIGLQEVDRFWKRSDHVDQPAWLSRRLGLHVAFGLNELRRSDGAGR 129

Query: 73  KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIK 132
           + +    +                         LR             +T         +
Sbjct: 130 RREYGTAILSRWPIRETRNVALPRWDDHARHGLLRTEIDMPGGSLSFATTHLIHAHHDEE 189

Query: 133 RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192
           R  +  +   +                       +   ND   T  +    ++  +    
Sbjct: 190 RAAQAKAVAKQFA-------------DDARRSVVVGDFNDEPNTPAIAAMTRRFTDAWAV 236

Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPS 252
                   +   YS+              RID++  S +      +   DT PR     S
Sbjct: 237 AG------SGKGYSYSSTKPK-------RRIDYVFGSEDLEPRAMTVD-DTDPR----AS 278

Query: 253 DHTPVIVSLDI 263
           DH P++   ++
Sbjct: 279 DHLPILTEFEL 289


>gi|194384902|dbj|BAG60857.1| unnamed protein product [Homo sapiens]
          Length = 392

 Score = 61.7 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 46/285 (16%), Positives = 82/285 (28%), Gaps = 59/285 (20%)

Query: 2   SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           S+ ++ TWN++ +       RAR   + +++   +PD+I LQE        P        
Sbjct: 142 SMFSLITWNIDGLDLNNLSERAR--GVCSYLALYSPDVIFLQEV------IPP------- 186

Query: 55  YHIETCGQKSYNGVAI-LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
           Y+     + S   +     +     I+       L  Q      +  +    L +     
Sbjct: 187 YYSYLKKRSSNYEIITGHEEGYFTAIMLKKSRVKLKSQEIIPFPSTKMMRNLLCVHVNVS 246

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
            +   + ++  +         +      L+               Q       +I+  D 
Sbjct: 247 GNELCLMTSHLESTRGHAAERMNQLKMVLK-------------KMQEAPESATVIFAGDT 293

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG------IRIDHIM 227
                       L N             H  Y+ WD   +S   N G      +R D I 
Sbjct: 294 NLRDREVTRCGGLPNNIVDVWEFLGKPKHCQYT-WDTQMNS---NLGITAACKLRFDRIF 349

Query: 228 LSPEATSLLHSARIDT---KPRGWTK------PSDHTPVIVSLDI 263
                 +      I        G  K      PSDH  ++ +LDI
Sbjct: 350 ----FRAAAEEGHIIPRSLDLLGLEKLDCGRFPSDHWGLLCNLDI 390


>gi|255089412|ref|XP_002506628.1| predicted protein [Micromonas sp. RCC299]
 gi|226521900|gb|ACO67886.1| predicted protein [Micromonas sp. RCC299]
          Length = 583

 Score = 61.7 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 4/57 (7%)

Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
             Y+ W+  A +   N G RID+ +      + +    I  K  G    SDH PV +
Sbjct: 310 GAYTCWNVSAGAQLTNYGSRIDYFLCDEVTAASVARCGIAPKHEG----SDHAPVFI 362


>gi|255085372|ref|XP_002505117.1| predicted protein [Micromonas sp. RCC299]
 gi|226520386|gb|ACO66375.1| predicted protein [Micromonas sp. RCC299]
          Length = 418

 Score = 61.7 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 50/348 (14%), Positives = 92/348 (26%), Gaps = 89/348 (25%)

Query: 6   VATWNVNSI--RARI----HNLAAWIKENN-PDIICLQE-----------------TKTE 41
             TWN NS+  R R       L  +++E + PD+IC+QE                 TK  
Sbjct: 45  FVTWNANSLLGRLRKQPDKDALFEYLREKDLPDVICVQETWLPAAAPNRRGTLKDDTKAA 104

Query: 42  DKN-------FPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARF 94
            ++          + L +   +      K      ++ K   +  V              
Sbjct: 105 REDAALIHLCLRQKPLSAYRPYWSCADVKRAGCAVLVKKDVDVVSVRRSLTASNGANGDV 164

Query: 95  IEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFA---------------- 138
                 +     R   L   +      T+              A                
Sbjct: 165 AHDEGRVLLLEFRSFVLLNTYAQNNGWTQESFAKRRRWDAEVHAFIAGNTAGATPRPRFD 224

Query: 139 ----SQRLELEEPLIFAGDYNIIPQPHDCYNPIIW------ENDACFTLEVRQSFQKL-- 186
               +      +PL++ GD N+  +  D  +P  +              E          
Sbjct: 225 DSDLNATSRRFKPLMWTGDLNVCHKEIDVTHPRFFATQKPEGRKGKPPPETPTDPGDCGQ 284

Query: 187 -----QNMGFTDAIRATHDTHHLY-----------SFWDYYA-DSWSKNKG--IRIDHIM 227
                      + +   H     Y           ++  +    +  K +G  +R+D+  
Sbjct: 285 PGFTRNERTRFERLVTAHALVDAYRRQRGDVKDAMTWMGHPGVVAVGKYRGMGMRLDYFF 344

Query: 228 LSPEATSLLHSARIDTKPRGW----TKP------SDHTPVIVSL-DIP 264
           +  E  + +      T   G      +P      SDH  V + L D+P
Sbjct: 345 VETELANRVEVCEQATDGMGLAAMAERPASAFFGSDHCAVYLRLKDVP 392


>gi|225448996|ref|XP_002273591.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 1948

 Score = 61.7 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/259 (11%), Positives = 73/259 (28%), Gaps = 35/259 (13%)

Query: 6    VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
            + +WN   + +R     +  +++   PDI+ +QETK                  +    +
Sbjct: 1341 IISWNTRGLGSRKKRRVVKDFLRSEKPDIVMIQETK------------------KAECDR 1382

Query: 64   SYNGVAILSKYQPIEI--VTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
             + G    ++ +   +       G  L +       +  +   +  +   +   G+    
Sbjct: 1383 RFVGSLWTARNKEWAVLPACGASGGILVMWDSKKLHSEEVVLGSFSVSVKFAVDGSEQFW 1442

Query: 122  TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
                   +       F  +  ++                    +          T  ++ 
Sbjct: 1443 LSAVYGPNSTALRKDFWEELSDIFGLSSPCWCVGGDFNVIRRCSEK--LGGGRLTPSMKD 1500

Query: 182  SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
                ++     D           +++ +       K    R+D  + S E   L   +  
Sbjct: 1501 LDDFIRENELIDPPL----RSASFTWSNMQEHPVCK----RLDRFLYSNEWEQLFPQSLQ 1552

Query: 242  DTKPRGWTKPSDHTPVIVS 260
            D  PR     SDH P+++ 
Sbjct: 1553 DVLPR---WTSDHWPIVLE 1568


>gi|301308230|ref|ZP_07214184.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 20_3]
 gi|300833700|gb|EFK64316.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 20_3]
          Length = 365

 Score = 61.7 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 42/284 (14%), Positives = 78/284 (27%), Gaps = 43/284 (15%)

Query: 3   VVTVATWNV------NSIRARIHNLAAWIKENNPDIICLQET------KTEDKNFPFETL 50
           V+ V T+NV      N  +   + +  +I  ++ DI+CLQE       K+   +  ++ L
Sbjct: 101 VLKVLTYNVMAFGYKNHTKIAPNKIIQYIANSDADIVCLQEYATAKSEKSLTASKIYDAL 160

Query: 51  QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
               Y        +      ++ +    +                     I  + L + N
Sbjct: 161 SMYPYRSVFYQSSTKFQSFGIAVFSKYPLSNSRMVKYDSDYNGSSVHEVNIKGKKLTLIN 220

Query: 111 LYLPHGNPITSTKYDDK-----------ISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159
            +L         +                     F +       +      A    I   
Sbjct: 221 NHLESFKLTMEDRTRYSSLIKSFSSDGLDDLKGAFEQKLGPAFRIRAKQAEAVSEEIKNA 280

Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK 219
             D        ND   +   R     L +             +  + ++           
Sbjct: 281 KGDYVLVCGDFNDTPISYAHRTIQGDLMDAFAESGRGMGITYNQNFFWF----------- 329

Query: 220 GIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             RID+I+ SP  TS   +  +D         SDH P+   L +
Sbjct: 330 --RIDNILHSPNMTS--MNCSVDKVAY-----SDHYPLWCYLKL 364


>gi|313156903|gb|EFR56341.1| endonuclease/exonuclease/phosphatase family protein [Alistipes sp.
           HGB5]
          Length = 294

 Score = 61.7 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/279 (14%), Positives = 78/279 (27%), Gaps = 37/279 (13%)

Query: 7   ATWNV-----------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55
           AT+N+           N    R+  +++ I+ ++ DI   QE            L   +Y
Sbjct: 26  ATYNIRQLNAKDTAEGNGWERRLPVISSLIRFHDFDIFGAQEVFHSQLQGMLAALPGYDY 85

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
            +         G    + +        L      +     +     + + +RI       
Sbjct: 86  -VGVGRDDGAAGGEYSAIFYKRGRFRLLDSGHFWLSEDPSKPGKGWDAKYVRICTW---- 140

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
           G             +         Q       LI A    +               +   
Sbjct: 141 GRFYDRQSRQRFWFFTTHTDHRGEQAQAESCRLILAKIEELCRGERVILTGDFNVGETSR 200

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
           +  + +    L +    D     +      +++D    ++      RID++ ++P     
Sbjct: 201 SYAILRDSGILSD--TYDTAEIRYAETGTENWFDPDIKTF-----RRIDYLFVTPGF--R 251

Query: 236 LHSARIDTK------PRGWTK------PSDHTPVIVSLD 262
           +    I T       P G  +      PSDH PV V L+
Sbjct: 252 VLRYGILTDTYRSENPDGGERKFRARTPSDHFPVQVELE 290


>gi|197123175|ref|YP_002135126.1| endonuclease/exonuclease/phosphatase [Anaeromyxobacter sp. K]
 gi|196173024|gb|ACG73997.1| Endonuclease/exonuclease/phosphatase [Anaeromyxobacter sp. K]
          Length = 261

 Score = 61.7 bits (148), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/266 (13%), Positives = 70/266 (26%), Gaps = 34/266 (12%)

Query: 5   TVATWNVNSIRAR-----IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
            V TWNV+ +R          +A  + +   D+  LQE        P     +       
Sbjct: 4   RVVTWNVHGLRGAGRRPDPERIARVLDDIGADVAGLQEVGAR---LPGADAHAA---EAL 57

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
                 NG    +                           ++  +  R          P+
Sbjct: 58  ARLTGLNGAFGPTLQHARGFAYGNAILSRHPIDATRTYDLSVPGREPRGCLRADLDLGPM 117

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
               +   +    R  R  +  L              I +     +P++   D     + 
Sbjct: 118 RVHVFAAHLGLHWRERRRQAAALLS----------ADILRDAALSHPLVLVGDFNSPSDR 167

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
               + L+      A+ A        S W            +R+D   +       +   
Sbjct: 168 SAVPRWLRRTLTDCAVAAGRPAATFPSAWPL----------LRLDRAYVDAAL--RVLGC 215

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPE 265
            +   P    + SDH P++V L++ E
Sbjct: 216 EVIRTPLAR-RASDHLPLVVELELTE 240


>gi|227889346|ref|ZP_04007151.1| conserved hypothetical protein [Lactobacillus johnsonii ATCC
          33200]
 gi|227850148|gb|EEJ60234.1| conserved hypothetical protein [Lactobacillus johnsonii ATCC
          33200]
          Length = 59

 Score = 61.3 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 24/54 (44%), Gaps = 1/54 (1%)

Query: 3  VVTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55
          ++   +WNVN +RA + H       + + DI  +Q+T+ E      +      Y
Sbjct: 6  IMKFMSWNVNGLRATLRHGFVNTFTDLDADIFGIQDTRVEPNEVKIDLPGYYQY 59


>gi|149011294|ref|ZP_01832541.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP19-BS75]
 gi|147764284|gb|EDK71215.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP19-BS75]
          Length = 278

 Score = 61.3 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 58/195 (29%), Gaps = 23/195 (11%)

Query: 4   VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDK---NFPFETL 50
           + + +WN++S+ A +            +   +   N DII +QETK   K       E L
Sbjct: 22  MKLISWNIDSLNAALTSDSARAKLSQEVLQTLVAENADIIAIQETKLSAKGPTKKHVEIL 81

Query: 51  QSL--NYHIETCGQKS-----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
           + L   Y       +      Y G   L K +    ++                      
Sbjct: 82  EELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAPSTMDLEGRIITLEFD 141

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                       G+ +   +                  L+ E+P++  GDYN+     D 
Sbjct: 142 AFFVTQVYTPNAGDGLKRLEERQVWDTKYAEY---LAELDKEKPVLATGDYNVAHNEIDL 198

Query: 164 YNPIIWENDACFTLE 178
            NP        FT E
Sbjct: 199 ANPASNRRSPGFTDE 213


>gi|119575862|gb|EAW55458.1| TRAF and TNF receptor associated protein, isoform CRA_a [Homo
           sapiens]
          Length = 392

 Score = 61.3 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 46/285 (16%), Positives = 82/285 (28%), Gaps = 59/285 (20%)

Query: 2   SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           S+ ++ TWN++ +       RAR   + +++   +PD+I LQE        P        
Sbjct: 142 SMFSLITWNIDGLDLNNLSERAR--GVCSYLALYSPDVIFLQEV------IPP------- 186

Query: 55  YHIETCGQKSYNGVAI-LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
           Y+     + S   +     +     I+       L  Q      +  +    L +     
Sbjct: 187 YYSYLKKRSSNYEIITGHEEGYFTAIMLKKSRVKLKSQEIIPFPSTKMMRNLLCVHVNVS 246

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
            +   + ++  +         +      L+               Q       +I+  D 
Sbjct: 247 GNELCLMTSHLESTRGHAAERMNQLKMVLK-------------KMQEAPESATVIFAGDT 293

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG------IRIDHIM 227
                       L N             H  Y+ WD   +S   N G      +R D I 
Sbjct: 294 NLRDREVTRCGGLPNNIVDVWEFLGKPKHCQYT-WDTQMNS---NLGITAACKLRFDRIF 349

Query: 228 LSPEATSLLHSARIDT---KPRGWTK------PSDHTPVIVSLDI 263
                 +      I        G  K      PSDH  ++ +LDI
Sbjct: 350 ----FRAAAEEGHIIPRSLDLLGLEKLDCGRFPSDHWGLLCNLDI 390


>gi|147846541|emb|CAN79508.1| hypothetical protein VITISV_038335 [Vitis vinifera]
          Length = 1167

 Score = 61.3 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/259 (12%), Positives = 65/259 (25%), Gaps = 68/259 (26%)

Query: 4   VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + TWNV      ++   +  +I+    D++C+QETK ++                   
Sbjct: 723 MKIITWNVRGANDSSKRKIIKNYIRNQRVDLMCIQETKIQE------------------- 763

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
                    +S+     +      D     A        I      +  L    G    S
Sbjct: 764 ---------MSEGIVRSLGLGRFSDWRARNAEGAAGGILICWDKRVLEILDWEEGQFSLS 814

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            ++        +     +  +       F                 +W        E   
Sbjct: 815 CRF--------KITENGAIWVFTGVYGPFTKVEREGMWEELGAIRGLW---GDPWGESSH 863

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
                   G  +                    +W++     +D  ++SP           
Sbjct: 864 GVXGHMEWGLNN-------------------QAWAR-----LDRFLVSPSWLDQFSGV-- 897

Query: 242 DTKPRGWTKPSDHTPVIVS 260
            T+ R     SDH P+++ 
Sbjct: 898 -TQGRLSRPTSDHFPIVLE 915


>gi|299147485|ref|ZP_07040550.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 3_1_23]
 gi|298514763|gb|EFI38647.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 3_1_23]
          Length = 316

 Score = 61.3 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 46/302 (15%), Positives = 87/302 (28%), Gaps = 45/302 (14%)

Query: 2   SVVTVATWNV-----------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETL 50
           + +TVA++N+           N    R   +A  ++ ++ DI   QE          E L
Sbjct: 26  TSITVASYNLRNANGGDSINGNGWGQRYPVIAQIVQYHDFDIFGTQECFIHQLKDMKEAL 85

Query: 51  QSLNY-HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
              +Y  +     K     + +        V       L          +      +   
Sbjct: 86  PGYDYIGVGRDDGKEKGEHSAIFYRTDKFDVIEKGDFWLSETPDVPSKGWDAVLPRICSW 145

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
             +           ++  +  I +  R  S  L  ++         +             
Sbjct: 146 GHFKCKDTGFEFLFFNLHMDHIGKKARVESAFLVQDKMKELGKGKELP----AILTGDFN 201

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
            +    + +   S   L +       R   +     +F D+  +S+++    RIDHI +S
Sbjct: 202 VDQTHQSYDAFVSKGVLCDSYEKAGFRYAING----TFNDFDPNSFTE---SRIDHIFVS 254

Query: 230 PEA--------------------TSLLHSA--RIDTKPRGWTKPSDHTPVIVSLDIPEPR 267
           P                          +     ID K      PSDH PV V L+  + +
Sbjct: 255 PSFHVKKYGVLTDTYRSIVGKGEKKQANDCPEEIDIKTYQARTPSDHFPVKVELEFDQRQ 314

Query: 268 KK 269
           +K
Sbjct: 315 QK 316


>gi|45478110|gb|AAS66226.1| LRRG00135 [Rattus norvegicus]
          Length = 1451

 Score = 61.3 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 47/251 (18%), Positives = 75/251 (29%), Gaps = 32/251 (12%)

Query: 6   VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + N+N + + I    L  WI   +P   CLQET   DK+  +  ++      +  GQK
Sbjct: 12  LISLNINGLNSPIKRHRLTNWICNEDPAFCCLQETHLRDKDRHYLRVKGWKTTFQANGQK 71

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
              GVAIL   +                 +            + I          I +  
Sbjct: 72  KQAGVAILISNKINF--------------QLKVIKKDKEGHFIFIKGKIHQDELSILNIY 117

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
             +  +           +  +    I  GD+N      D        +D     EV    
Sbjct: 118 APNTRAPTYIKETLLKLKTHIAPHTIIVGDFNTPLSSMDRSWKQKLNSDVDRLREVMSQM 177

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
                   TD  R  +     Y+F+     ++SK     IDHI+      +      I  
Sbjct: 178 ------DLTDIYRTFYPKAKGYTFFSAPHGTFSK-----IDHIIGQKTGLNRYRKIEIIP 226

Query: 244 KPRGWTKPSDH 254
                   SDH
Sbjct: 227 CVL-----SDH 232


>gi|122938178|gb|ABM68943.1| APEX1 [Lemur catta]
          Length = 129

 Score = 61.3 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 7/116 (6%)

Query: 24  WIKENNPDIICLQETKTEDKNFPFETLQSLN----YHIETCGQKSYNGVAILSKYQPIEI 79
           W+KE +PDI+CLQETK  +   P E  +       Y      ++ Y+GV +LS+  P+++
Sbjct: 1   WVKEESPDILCLQETKCSENKLPTELQELAGLSHQYWSAPSDKEGYSGVGLLSRQCPLKV 60

Query: 80  VTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135
              +  ++ D + R I A      + + +       G  +   +Y  +     R  
Sbjct: 61  SYGIGEEEHDQEGRVIVAE---FDKFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKF 113


>gi|326790116|ref|YP_004307937.1| endonuclease/exonuclease/phosphatase [Clostridium lentocellum DSM
           5427]
 gi|326540880|gb|ADZ82739.1| Endonuclease/exonuclease/phosphatase [Clostridium lentocellum DSM
           5427]
          Length = 266

 Score = 61.3 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/282 (13%), Positives = 78/282 (27%), Gaps = 36/282 (12%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET-------KTEDKNFPFETL- 50
           + + T N +S R      ++  LA  IKE + DII LQE          +D++   +   
Sbjct: 1   MRILTLNTHSWREENQEEKMSYLAEIIKERDYDIIALQEINQSTASPYLQDRHLRRDNFM 60

Query: 51  -------QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
                  + +              V    +     +                     +  
Sbjct: 61  VVLQQLIEKIGGPKYNSFWDLSKVVRDEYEEGSAILCKMPITHTSCFTVSKSRDRDDVKA 120

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
           + +              +  Y ++   +                         +      
Sbjct: 121 RKIV-----------KVTVTYKEQEIDLYSCHLGWWHDEIEPFEYQCDRLVEEMDSDKLS 169

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223
                + N+A    E    +  L + GF D      +     +     A       G+RI
Sbjct: 170 LLMGDFNNNANLREEG---YDYLIDKGFYDTYILAGEKDQGVTVQGEIAGWKGNKVGLRI 226

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           D I+++   T  + S+++          SDH  V V L++ +
Sbjct: 227 DLILVNKTLT--VKSSKVIFNGDYKNVVSDHYGVEVELELED 266


>gi|311032597|ref|ZP_07710687.1| hypothetical protein Bm3-1_19034 [Bacillus sp. m3-13]
          Length = 294

 Score = 61.3 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 52/283 (18%), Positives = 88/283 (31%), Gaps = 30/283 (10%)

Query: 5   TVATWNVNSIRA-----------RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           TV ++N   +R            R H +A  I    PD+I  QE       +  ET +  
Sbjct: 6   TVMSFN---LRVIVASDPFSWDDRKHWIADTINTYTPDVIGTQEATIPMLEWLKETFEE- 61

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVT--HLPGDDLDVQARFIEATFTINTQTLRIGNL 111
           +Y +    +     V   S     +        G  +  +   I  T   +    RI + 
Sbjct: 62  SYEVYAVNRTESTEVGEFSAVFVKKSRFIIGSKGSFMLAETPDIIGTMGWDAHCERICSW 121

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
                  I   + +  + +    L    +    E   +         + ++   P+I   
Sbjct: 122 ----VELIPKRQTEPVLRFFNTHLDHMGKLARKEGLKLICDVIR--RKDNEQSLPVILTG 175

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
           D     E     +                 + L +F  Y   +    KG  ID+I  S  
Sbjct: 176 DFNDAPESEALAEVSSMKSCYSCFTEEEKENSL-TFHAYEGGT----KGSPIDYIFGSNG 230

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDST 274
                 +ARI         PSDH PV+ ++ I E  +  + ST
Sbjct: 231 VE--FLTARILRDSFNGGYPSDHYPVLATVKILEGDEDLKKST 271


>gi|297677283|ref|XP_002816533.1| PREDICTED: 5'-tyrosyl-DNA phosphodiesterase-like [Pongo abelii]
          Length = 392

 Score = 61.3 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 46/285 (16%), Positives = 81/285 (28%), Gaps = 59/285 (20%)

Query: 2   SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           S+ ++ TWN++ +       RAR   + +++   +PD+I LQE        P        
Sbjct: 142 SMFSLITWNIDGLDLNNLSERAR--GVCSYLALYSPDVIFLQEV------IPP------- 186

Query: 55  YHIETCGQKSYNGVAI-LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
           Y+       S   +     +     I+       L  Q      +  +    L +     
Sbjct: 187 YYSYLKKSSSNYEIITGHEEGYFTAIMLKKSRVKLKSQEIIPFPSTKMMRNLLCVHVSVS 246

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
            +   + ++  +         +      L+               Q       +I+  D 
Sbjct: 247 GNELCLMTSHLESTRGHAAERMNQLKMVLK-------------KMQEAPESATVIFAGDT 293

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG------IRIDHIM 227
                       L N             H  Y+ WD   +S   N G      +R D I 
Sbjct: 294 NLRDREVTRCGGLPNNIVDVWEFLGKPKHCQYT-WDTQMNS---NLGITAACKLRFDRIF 349

Query: 228 LSPEATSLLHSARIDT---KPRGWTK------PSDHTPVIVSLDI 263
                 +      I        G  K      PSDH  ++ +LDI
Sbjct: 350 ----FRAAAEEGHIVPQSLDLLGLEKLDCGRFPSDHWGLLCNLDI 390


>gi|319780945|ref|YP_004140421.1| endonuclease/exonuclease/phosphatase [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317166833|gb|ADV10371.1| Endonuclease/exonuclease/phosphatase [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 289

 Score = 61.3 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 42/295 (14%), Positives = 75/295 (25%), Gaps = 44/295 (14%)

Query: 4   VTVATWNVN-SIRARIHNLAAW--IKEN--NPDIICLQE-TKTEDK----NFPFETLQSL 53
           + + T+N+   I   +        I +     D+I LQE T+   +    +   E  ++L
Sbjct: 1   MKLVTYNIQYGIG--LDGQYDVGRIADAVRGADVIALQEVTRNNPRNGGRDMVAEIGEAL 58

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
             +    G      +            T   G+ +  +     +   +  ++     +  
Sbjct: 59  PDYFAVYGSNFEANIGSHIDNGRAVTKTFQLGNMVLSRTPIHLSRNLLLPRSRSFEMMNF 118

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDY---------------NIIP 158
             G      +                  LE    + F                    I  
Sbjct: 119 QRGALEALIETPLGFIRFYSIHLDHRSPLERASQIQFLRQRMLNYALEGGALSGVAEIGL 178

Query: 159 QPHDCYNPIIWENDACF------------TLEVRQSFQKLQNMGFTDAIRATHDTHHLYS 206
                    +   D                 +         +     A+R       L S
Sbjct: 179 PELPHPEAFVGMGDFNMLAGSPEYVELAGRPDHEFGMPLTADFAVDAALRLNATGDDLIS 238

Query: 207 FWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           + D    +    +  RID+I  S      L    +D K  G    SDH PV V L
Sbjct: 239 WVDPKQPTDPS-RHKRIDYIFTSASLARSLQRLWVDRKAVG----SDHLPVWVEL 288


>gi|37654232|gb|AAQ96221.1| LRRGT00008 [Rattus norvegicus]
          Length = 1575

 Score = 61.3 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 46/251 (18%), Positives = 74/251 (29%), Gaps = 32/251 (12%)

Query: 6   VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + N+N + + I    L  WI   +P   CLQET   DK+  +  ++      +  GQK
Sbjct: 623 LISLNINGLNSPIKRHRLTNWIGNEDPAFCCLQETHLRDKDRHYLRVKGWKTTFQANGQK 682

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
              GVAIL   +                 +            + I          I +  
Sbjct: 683 KQAGVAILISNKINF--------------QLKVIKKDKEGHFIFIKGKIHQDELSILNIY 728

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
             +  +           +  +    I  GD+N      D         D     EV    
Sbjct: 729 APNTRAPTYVKETLLKLKTHITPHTIIVGDFNTPLSSMDRSWKQKLHRDVDRLREVMSQM 788

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
                   TD  R  +     Y+F+     ++SK     I+HI+      +      I  
Sbjct: 789 ------DLTDIYRTFYPKAKGYTFFSAPHGTFSK-----INHIVGQKTGLNRYRKIEIIP 837

Query: 244 KPRGWTKPSDH 254
                   SDH
Sbjct: 838 CVL-----SDH 843


>gi|187932631|ref|YP_001886154.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum B str. Eklund 17B]
 gi|187720784|gb|ACD22005.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum B str. Eklund 17B]
          Length = 258

 Score = 61.3 bits (147), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 45/277 (16%), Positives = 82/277 (29%), Gaps = 37/277 (13%)

Query: 4   VTVATWNVNSIR------------ARIHNLAAWIKENNPDIICLQETKTEDKNFPF---- 47
           + V T+N   +R             R + +   + + + DII  QE    +K F      
Sbjct: 1   MKVMTFN---LRCDFFMDFKNRWDERRNLVFDIVNKYDCDIIGTQE--ATEKMFNDISNN 55

Query: 48  -ETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
            +    +            N + I  K++  +  T    D+ D   R    +      T 
Sbjct: 56  IDAFNIIGNPRSKKLFSERNDILISKKHKVNDYRTFWLRDNYDKIGRSKWYSMFPRICTT 115

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
            I  L       I ++  D  +   + +                  ++    Q  +    
Sbjct: 116 AIIELENSKRIRICNSHLDFLLPQARAYELKK------------LSEFIKKEQEKEDLPL 163

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226
           II  +                N+     +        LY+         +K KG  ID+I
Sbjct: 164 IIMGDFNSNPNSKLIKNFTSGNIFNKRLVAVQDMNKELYT-KATMGHFKNKEKGSHIDYI 222

Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            +S E    +    I         PSDH P++  ++I
Sbjct: 223 FVSEEFE--IIDVEIVKYNVNGKYPSDHYPLMAEINI 257


>gi|150010182|ref|YP_001304925.1| hypothetical protein BDI_3605 [Parabacteroides distasonis ATCC
           8503]
 gi|255012556|ref|ZP_05284682.1| hypothetical protein B2_01514 [Bacteroides sp. 2_1_7]
 gi|149938606|gb|ABR45303.1| conserved hypothetical protein [Parabacteroides distasonis ATCC
           8503]
          Length = 365

 Score = 61.3 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 42/284 (14%), Positives = 78/284 (27%), Gaps = 43/284 (15%)

Query: 3   VVTVATWNV------NSIRARIHNLAAWIKENNPDIICLQET------KTEDKNFPFETL 50
           V+ V T+NV      N  +   + +  +I  ++ DI+CLQE       K+   +  ++ L
Sbjct: 101 VLKVLTYNVMAFGYKNHTKIAPNKIIQYIANSDADIVCLQEYATAKSEKSLTASKIYDAL 160

Query: 51  QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
               Y        +      ++ +    +                     I  + L + N
Sbjct: 161 SMYPYRSVFYQSSTKFQSFGIAVFSKYPLSNSRMVKYDSDYNGSSVHEVNIKGKKLTLIN 220

Query: 111 LYLPHGNPITSTKYDDK-----------ISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159
            +L         +                     F +       +      A    I   
Sbjct: 221 NHLESFKLTMEDRTRYSSLIKSFSSDGLDDLKGAFEQKLGPAFRIRAKQAEAVSKEIKNA 280

Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK 219
             D        ND   +   R     L +             +  + ++           
Sbjct: 281 KGDYVLVCGDFNDTPISYAHRTIQGDLTDAFAESGRGMGITYNQNFFWF----------- 329

Query: 220 GIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             RID+I+ SP  TS   +  +D         SDH P+   L +
Sbjct: 330 --RIDNILHSPNMTS--MNCSVDKVAY-----SDHYPLWCYLKL 364


>gi|189465268|ref|ZP_03014053.1| hypothetical protein BACINT_01614 [Bacteroides intestinalis DSM
           17393]
 gi|189437542|gb|EDV06527.1| hypothetical protein BACINT_01614 [Bacteroides intestinalis DSM
           17393]
          Length = 368

 Score = 61.3 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/275 (14%), Positives = 80/275 (29%), Gaps = 25/275 (9%)

Query: 2   SVVTVATWNVNSIRARIHN-----LAAWIKENNPDIICLQETKTEDK-----NFPFE-TL 50
           +   V ++N+      +       +  ++K +  DI+CLQE +T +          E  L
Sbjct: 102 NSFKVLSYNIMGFDGAVKKDGENPILNYLKNSGADILCLQEYQTIESSHYLSQKDVEKAL 161

Query: 51  QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
           +   YH              ++ Y    I++    D +            I   T+ + N
Sbjct: 162 KDYPYHKIQTVGSGKGHTNRIACYSKYPILSSRRLDYVSEYNGSAVYELKIGEDTVMLIN 221

Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170
            +L         K   +           +++++    L+               + I  +
Sbjct: 222 NHLESNKLTKEDKVVYESMLK----SPETKKVKSGARLLIRKLAEASAIRGSQADSIAQK 277

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG---IRIDHIM 227
             A     +                      +  ++         S N+     RID+I+
Sbjct: 278 IAASQHPYIIVCGDFNDTPISYAHRVIGQGLNDTFTQ-SGRGLGISYNQNKFYFRIDNIL 336

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
            S    S   +  +D       K SDH P+   L 
Sbjct: 337 ASKNLKSY--NCTVDRSI----KESDHYPIWCYLK 365


>gi|34392578|dbj|BAC82621.1| pol-like protein [Danio rerio]
          Length = 1148

 Score = 61.3 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 44/266 (16%), Positives = 87/266 (32%), Gaps = 33/266 (12%)

Query: 1   MSVVTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           M+ +T++T NV S+R+  R  ++ +++K    D+  LQE        PF      NY   
Sbjct: 10  MA-LTISTINVRSVRSPIRAQSVLSFLKLLKSDVFLLQEC-----ALPF----ISNYRKW 59

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
                    +   S     +    +     +        T   + +   +   +L     
Sbjct: 60  EDVWTPGPSLWSGSNQNKND---GVAILIKNPNILVKGTTVVRDGRAFLVTLTFLGRDFN 116

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
           + +       +     L      +  + PL+ AGD+N I    D        +       
Sbjct: 117 VLNIYGHTDKNERYELLEDLQPHMLGKPPLVVAGDFNCILTQKDRKKADFKLDKT----- 171

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
                  +++    D  R  H     ++++   + S       RID+I  + +   +   
Sbjct: 172 STLLNNLVKDFKLVDCFRQVHPREEGFTWFSSDSTS-----ASRIDYIF-TRDFPPV--- 222

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIP 264
                     T  SDHT +  +L +P
Sbjct: 223 ----DATLTPTFFSDHTILSCTLSLP 244


>gi|45478188|gb|AAS66265.1| LRRGT00174 [Rattus norvegicus]
          Length = 419

 Score = 61.3 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 51/254 (20%), Positives = 82/254 (32%), Gaps = 33/254 (12%)

Query: 6   VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + N+N + + I    L  WI+  +P   CLQET   DK+  +  ++      +  GQK
Sbjct: 12  LISLNINGLNSPIKRHRLTNWIRNEDPAFCCLQETHLRDKDRHYLRVKGWKTTFQANGQK 71

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
              GVAIL   +                 +            + I          I +  
Sbjct: 72  KQAGVAILISNKINF--------------QLKVIKKDKEGHFIFIKGKIHQDELSILNIY 117

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
             +  +           +  +    I  GD+N      D        +D     EV    
Sbjct: 118 APNTRAPTYVKETLLKLKTHIAPHTIIVGDFNTPLSSMDRSWKQKLNSDVDRLREVMSQM 177

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL----LHSA 239
                   TD  R  +     Y+F+     ++SK     IDHI+      +     +H  
Sbjct: 178 ------DLTDIYRTFYPKAKGYTFFSASHGTFSK-----IDHIIGQKTGLNRDRHWVHKQ 226

Query: 240 RI--DTKPRGWTKP 251
           RI  + KPR   KP
Sbjct: 227 RIQLEYKPRYRIKP 240


>gi|242079061|ref|XP_002444299.1| hypothetical protein SORBIDRAFT_07g019823 [Sorghum bicolor]
 gi|241940649|gb|EES13794.1| hypothetical protein SORBIDRAFT_07g019823 [Sorghum bicolor]
          Length = 235

 Score = 61.3 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 78/254 (30%), Gaps = 31/254 (12%)

Query: 9   WNVNSIR--ARIHNLAAWIKENNPDIICLQETKTED-KNFPFETLQSLNYHIETCGQKSY 65
           WNV  +   AR   +   ++++N  IICLQETK +         +   N+   +      
Sbjct: 4   WNVRGLNNNARKDAVNELVRDSNATIICLQETKLQAIDQATVLRILGANF-ANSYAVSPA 62

Query: 66  NGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYD 125
           +           E    L    L             +    +I  +Y P G+        
Sbjct: 63  DNTRGGILLAVNENFFDLTNVLLSPHTITATIRMRADGVQWQITTVYGPQGDDQKLQFLQ 122

Query: 126 DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQK 185
           +            + +L      +  GD+N+I Q  D  N  +             S   
Sbjct: 123 EL----------QNIQLPSHGRWLVLGDFNLIYQAQDKNNTNLNRRLMGSFKSTLNSM-- 170

Query: 186 LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKP 245
                    ++        +++     +        RID +  +PE   L  +  +   P
Sbjct: 171 --------NLKEIRLNGRRFTW----TNEQDNPTMSRIDRVFCTPEWEILFPACFLHFLP 218

Query: 246 RGWTKPSDHTPVIV 259
                 SDHTP+++
Sbjct: 219 SLM---SDHTPLLL 229


>gi|147780533|emb|CAN69126.1| hypothetical protein VITISV_008195 [Vitis vinifera]
          Length = 1844

 Score = 61.3 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/268 (10%), Positives = 76/268 (28%), Gaps = 49/268 (18%)

Query: 4   VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + +WN   + ++     +  ++    PD++ +QETK E+                   
Sbjct: 757 MKIISWNTRGLGSKKKRRVVKNFLSSEKPDVVMIQETKKEE------------------- 797

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
                      +     + +    D   + A        I   ++++    +  G+   S
Sbjct: 798 ---------CDRRLVGSVWSVRNKDWAALPASGASGGILIIWDSIKMRREEVVLGSFSVS 848

Query: 122 TKYDDKIS---WIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
            K+        W+       +  L  +  +  +    +                +   L 
Sbjct: 849 IKFAMDGCESLWLSAVYGPNNSALRKDFWVELSDIAGLSHPRWCVGGDFNVIRRSSEKLG 908

Query: 179 VRQSFQKLQNMGFTDAIRATHDTH---HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
             +    +++           D+      Y++    ++        R+D  + S E    
Sbjct: 909 GSRLTPCMKDFDEFIRDCELIDSPLRSVSYTW----SNMQENPVCKRLDRFLYSNEWEQ- 963

Query: 236 LHSARIDTKPRGWTKP---SDHTPVIVS 260
                +  +      P   SDH P+++ 
Sbjct: 964 -----VFPQSLQGVLPRWTSDHWPIVLE 986


>gi|60680824|ref|YP_210968.1| putative endonuclease/exonuclease/phosphatase family protein
           [Bacteroides fragilis NCTC 9343]
 gi|60492258|emb|CAH07023.1| putative endonuclease/exonuclease/phosphatase family protein
           [Bacteroides fragilis NCTC 9343]
          Length = 285

 Score = 61.0 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/277 (14%), Positives = 79/277 (28%), Gaps = 37/277 (13%)

Query: 4   VTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL- 53
           V VAT+N+         NS + R   +  +I+E +PD++ +QE    +     + L  L 
Sbjct: 27  VRVATFNIRYDNPGDSLNSWKYRKEKVCEFIREKHPDVLGMQEV--LNHQL-KDLLSGLP 83

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTH----LPGDDLDVQARFIEATFTINTQTLRIG 109
           +Y     G++        +     +              +      +  +      +   
Sbjct: 84  DYAYVGVGREDGKTQGEYAPVFYRKDKYDLLDSNTFWLSEHPDSIGKLGWDAACTRVATW 143

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
                          +     +    R  S  L +++    AG +  +       +    
Sbjct: 144 AKLKDKTTGKEFLMLNTHFDHVGTEARRNSALLIIDKIKEIAGTHPAMMTGDFNVSEEWE 203

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYA---DSWSKNKGIRIDHI 226
                 + E                      +   Y+F D+         K     ID I
Sbjct: 204 AYKTITSNEFVLKDAWKIAGK---------QSGENYTFHDFGRVPVGEREK-----IDFI 249

Query: 227 MLSPEATSLLHSARID-TKPRGWTKPSDHTPVIVSLD 262
            ++P+    +  A I  +     T  SDH   +  L+
Sbjct: 250 FVTPQI--KVADAEIISSAITDSTYLSDHNAHLADLE 284


>gi|326432699|gb|EGD78269.1| hypothetical protein PTSG_09334 [Salpingoeca sp. ATCC 50818]
          Length = 514

 Score = 61.0 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/296 (13%), Positives = 81/296 (27%), Gaps = 35/296 (11%)

Query: 3   VVTVATWNVNSI--R-ARIH----NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55
           V+ V +WN+N +  R +R+     ++   ++   PD++ LQE +    +     +QSL +
Sbjct: 224 VLRVVSWNINGLTDRPSRLPRTYIHMCDELRSVEPDVVLLQEVEPTYYDHLLLVMQSLGF 283

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL--RIGNLYL 113
            I    Q      A               G             +   +     R+  +  
Sbjct: 284 -IACHDQPRMAAAANPMLAFMFAAAGGGVGMYDMDTNPTRAPPYFTMSFIRRGRLSLMSH 342

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
                  +    D  +   R  R   +       L    +Y+              +  A
Sbjct: 343 RRTPFHNTNMMRDLNTLDVRCDRTMRRLWIGNVHLESCKEYSQQRCQQFTECLQALDRHA 402

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHH--------------LYSFWDYYADS----- 214
              +    + +  +     DA   +H                   ++ WD   +      
Sbjct: 403 VGIVIGDTNLRDPEARRTLDAYLTSHPQSGIDDAWLMAGSPPAARWT-WDTRVNDTLDTS 461

Query: 215 -WSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP-SDHTPVIVSLDIPEPRK 268
            W      R D   +           ++    R      SDH  V +  + P  ++
Sbjct: 462 RWQSRPHARYDRCFV-KGL--KTLEFQLLGTQRKPNGFISDHFGVCIDFEWPPAQR 514


>gi|298374557|ref|ZP_06984515.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 3_1_19]
 gi|298268925|gb|EFI10580.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 3_1_19]
          Length = 365

 Score = 61.0 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 42/284 (14%), Positives = 78/284 (27%), Gaps = 43/284 (15%)

Query: 3   VVTVATWNV------NSIRARIHNLAAWIKENNPDIICLQET------KTEDKNFPFETL 50
           V+ V T+NV      N  +   + +  +I  ++ DI+CLQE       K+   +  ++ L
Sbjct: 101 VLKVLTYNVMAFGYKNHTKIAPNKIIQYIANSDADIVCLQEYATAKSEKSLTASKIYDAL 160

Query: 51  QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
               Y        +      ++ +    +                     I  + L + N
Sbjct: 161 SMYPYRSVFYQSSTKFQSFGIAVFSKYPLSNSRMVKYDSDYNGSSVHEVNIKGKKLTLIN 220

Query: 111 LYLPHGNPITSTKYDDK-----------ISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159
            +L         +                     F +       +      A    I   
Sbjct: 221 NHLESFKLTMEDRTRYSSLIKSFSSDGLDDLKGAFEQKLGPAFRIRAKQAEAVSEEIKNA 280

Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK 219
             D        ND   +   R     L +             +  + ++           
Sbjct: 281 KGDYVLVCGDFNDTPISYAHRTIQGDLTDAFAESGRGMGITYNQNFFWF----------- 329

Query: 220 GIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             RID+I+ SP  TS   +  +D         SDH P+   L +
Sbjct: 330 --RIDNILHSPNMTS--MNCSVDKVAY-----SDHYPLWCYLKL 364


>gi|17510359|ref|NP_493461.1| hypothetical protein Y63D3A.4 [Caenorhabditis elegans]
 gi|75028976|sp|Q9XWG3|TDP2_CAEEL RecName: Full=5'-tyrosyl-DNA phosphodiesterase; Short=5'-Tyr-DNA
           phosphodiesterase
 gi|3881233|emb|CAA21707.1| C. elegans protein Y63D3A.4, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 362

 Score = 61.0 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 43/272 (15%), Positives = 79/272 (29%), Gaps = 49/272 (18%)

Query: 6   VATWNVNSI--RA---RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           V +WN++ +  R+   R+  +A  +K  NPDI+ LQE   +    P + LQSL Y I   
Sbjct: 122 VMSWNIDGLDGRSLLTRMKAVAHIVKNVNPDILFLQEV-VDRDLAPIDKLQSL-YKIYYS 179

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +      AIL   +  ++  H      +            +   L++  L     +   
Sbjct: 180 NKGCQYYTAILVS-KMFDVEKHDVIHFQNSGMYRTLQILEGSIGGLKVFLLNTHLESTRE 238

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
                                      + F GD N+  +                     
Sbjct: 239 HRPQRCAQFGFCMDKVREIIAQNPGALVFFGGDLNLRDEEVS------------------ 280

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG--IRIDHIMLSPEA------ 232
               ++ +        A  D    +++  +  D+     G  +R D +  S         
Sbjct: 281 ----RVPDGVKDAWEAAGSDNKTKFTWDTFKNDNKQGFHGAKMRFDRLYWSGPLDKVKFT 336

Query: 233 ---TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
                 + S            PSDH  +  + 
Sbjct: 337 LEGRQRIRSC--------LCFPSDHWAINATF 360


>gi|265762754|ref|ZP_06091322.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|263255362|gb|EEZ26708.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
          Length = 285

 Score = 61.0 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/275 (14%), Positives = 81/275 (29%), Gaps = 33/275 (12%)

Query: 4   VTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL- 53
           V VAT+N+         NS + R   +  +I+E +PD++ +QE    +     + L  L 
Sbjct: 27  VRVATFNIRYDNPGDSLNSWKYRKEKVCEFIREKHPDVLGMQEV--LNHQL-KDLLSGLP 83

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTH----LPGDDLDVQARFIEATFTINTQTLRIG 109
           +Y     G++        +     +              +      +  +      +   
Sbjct: 84  DYAYVGVGREDGKTQGEYAPVFYRKDKYDLLDSNTFWLSEHPDSIGKLGWDAACTRVATW 143

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
                          +     +    R  S  L +++    AG ++ +       +    
Sbjct: 144 AKLKDKTTGKEFLMLNTHFDHVGTEARRNSALLIIDKIKEIAGTHSAMMTGDFNVSEEWE 203

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDY-YADSWSKNKGIRIDHIML 228
                 + E                      +   Y+F D+       + K   ID I +
Sbjct: 204 AYKTITSNEFVLKDAWKIAGK---------QSGENYTFHDFGRVPVAEREK---IDFIFV 251

Query: 229 SPEATSLLHSARID-TKPRGWTKPSDHTPVIVSLD 262
           +P+    +  A I  +     T  SDH   +  L+
Sbjct: 252 TPQI--KVADAEIISSAITDSTYLSDHNAHLADLE 284


>gi|241956622|ref|XP_002421031.1| RNA exonuclease, putative; rRNA processing protein, putative
           [Candida dubliniensis CD36]
 gi|223644374|emb|CAX41187.1| RNA exonuclease, putative [Candida dubliniensis CD36]
          Length = 497

 Score = 61.0 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/177 (12%), Positives = 53/177 (29%), Gaps = 23/177 (12%)

Query: 1   MSVVTVATWNV-------------NS------IRARIHNLAAWIKENNPDIICLQET-KT 40
           +  + + ++N+             N       +R++I  L   +K  N DI+CLQE  K 
Sbjct: 90  LPSIKIMSYNILAQTLIRREIYPTNGKILKWSVRSQI--LLDELKHYNADIMCLQEVDKV 147

Query: 41  EDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT 100
           + + F    L+ L Y        + N   ++   + + +  H     LD       +   
Sbjct: 148 QYEGFWVSQLEKLGYSTRFYRNNTKNHGCVIVFREKLFVCKHQSFIRLDQDLNQEASEKQ 207

Query: 101 INTQTL-RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI 156
           +    +      ++ +     +   +             +  L       +      
Sbjct: 208 LPPARIATTNIAFMAYLEFTPAFVKEYPCLKETNGFIIGTTHLFWHPFGTYERTRQT 264


>gi|23510348|ref|NP_057698.2| tyrosyl-DNA phosphodiesterase 2 [Homo sapiens]
 gi|67462008|sp|O95551|TYDP2_HUMAN RecName: Full=Tyrosyl-DNA phosphodiesterase 2; Short=Tyr-DNA
           phosphodiesterase 2; AltName: Full=5'-tyrosyl-DNA
           phosphodiesterase; Short=5'-Tyr-DNA phosphodiesterase;
           AltName: Full=ETS1-associated protein 2; AltName:
           Full=ETS1-associated protein II; Short=EAPII; AltName:
           Full=TRAF and TNF receptor-associated protein
 gi|11493669|gb|AAG35600.1|AF201687_1 ETS1-associated protein 2 [Homo sapiens]
 gi|4210353|emb|CAA21141.1| TRAF and TNF receptor-associated protein (TTRAP)(EAP2, AD022,
           MGC9099) [Homo sapiens]
 gi|8247254|emb|CAB92966.1| TRAF and TNF receptor associated protein [Homo sapiens]
 gi|17028465|gb|AAH17553.1| TRAF and TNF receptor associated protein [Homo sapiens]
 gi|47060297|gb|AAT09764.1| TRAF and TNF receptor associated protein [Homo sapiens]
 gi|83759169|gb|AAI10376.1| TRAF and TNF receptor associated protein [Homo sapiens]
 gi|167773417|gb|ABZ92143.1| TRAF and TNF receptor associated protein [synthetic construct]
 gi|306921401|dbj|BAJ17780.1| TRAF and TNF receptor associated protein [synthetic construct]
          Length = 362

 Score = 61.0 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 46/285 (16%), Positives = 82/285 (28%), Gaps = 59/285 (20%)

Query: 2   SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           S+ ++ TWN++ +       RAR   + +++   +PD+I LQE        P        
Sbjct: 112 SMFSLITWNIDGLDLNNLSERAR--GVCSYLALYSPDVIFLQEV------IPP------- 156

Query: 55  YHIETCGQKSYNGVAI-LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
           Y+     + S   +     +     I+       L  Q      +  +    L +     
Sbjct: 157 YYSYLKKRSSNYEIITGHEEGYFTAIMLKKSRVKLKSQEIIPFPSTKMMRNLLCVHVNVS 216

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
            +   + ++  +         +      L+               Q       +I+  D 
Sbjct: 217 GNELCLMTSHLESTRGHAAERMNQLKMVLK-------------KMQEAPESATVIFAGDT 263

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG------IRIDHIM 227
                       L N             H  Y+ WD   +S   N G      +R D I 
Sbjct: 264 NLRDREVTRCGGLPNNIVDVWEFLGKPKHCQYT-WDTQMNS---NLGITAACKLRFDRIF 319

Query: 228 LSPEATSLLHSARIDT---KPRGWTK------PSDHTPVIVSLDI 263
                 +      I        G  K      PSDH  ++ +LDI
Sbjct: 320 ----FRAAAEEGHIIPRSLDLLGLEKLDCGRFPSDHWGLLCNLDI 360


>gi|224131300|ref|XP_002321050.1| predicted protein [Populus trichocarpa]
 gi|222861823|gb|EEE99365.1| predicted protein [Populus trichocarpa]
          Length = 449

 Score = 61.0 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 47/284 (16%), Positives = 82/284 (28%), Gaps = 30/284 (10%)

Query: 8   TWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNF-----PFETLQSLNYHIETCGQ 62
           + N+ S R+    +   +KE + DI+ LQ+ K E++              +NY +     
Sbjct: 164 SVNIKSYRS-TRTVLQVLKELDADILALQDVKAEEEKAMKPLSDLAAALGMNY-VFAESW 221

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
               G AILSK+           DD D +              +     +L H +     
Sbjct: 222 APEYGNAILSKWPIKRWKVQKIFDDTDFRNVLKATIDVPQAGEVNFHCTHLDHLDENWRM 281

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           K  D I          +  L   +   ++ +        D              +EV   
Sbjct: 282 KQIDAIIQSSDAPHILAGGLNSLDETDYSEER-----WTDIVKYYEEMGKPTPKVEVMSF 336

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN------KGIRIDHIMLSPEATSLL 236
            +        D          L         +  +N       G R+D+I+ SP +    
Sbjct: 337 MKSKHYTDAKDYAGECEAVVIL---------AKGQNVQGTCKYGTRVDYILASPNSPYKF 387

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
                          SDH  V V + +      Q+    +  +P
Sbjct: 388 VPGS--YSVFSSKGTSDHHIVKVDI-VKARCSSQEKVARKKRQP 428


>gi|171780196|ref|ZP_02921100.1| hypothetical protein STRINF_01984 [Streptococcus infantarius
          subsp. infantarius ATCC BAA-102]
 gi|171281544|gb|EDT46979.1| hypothetical protein STRINF_01984 [Streptococcus infantarius
          subsp. infantarius ATCC BAA-102]
          Length = 109

 Score = 61.0 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 30/75 (40%), Gaps = 10/75 (13%)

Query: 4  VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
          + + +WN++SI A +            +   +   + DII +QETK        + LQ L
Sbjct: 1  MKLISWNIDSINAALTSDSARAVLSRAVINTLVAEDADIIAIQETKLSANGPTKKHLQIL 60

Query: 54 NYHIETCGQKSYNGV 68
          N +         + V
Sbjct: 61 NDYFPDYDISWRSSV 75


>gi|116254404|ref|YP_770242.1| phosphatase [Rhizobium leguminosarum bv. viciae 3841]
 gi|115259052|emb|CAK10163.1| putative phosphatase [Rhizobium leguminosarum bv. viciae 3841]
          Length = 288

 Score = 61.0 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 47/301 (15%), Positives = 93/301 (30%), Gaps = 58/301 (19%)

Query: 4   VTVATWNVN---SIRARIHNLAAWIKE--NNPDIICLQETKTEDKNFPFETLQSL----- 53
           +  A++N+     +  R     A I       D+I LQE     + F       +     
Sbjct: 1   MNFASYNIQYGFGLDGRYD--LARIARSLEGADVIALQEV---TRGFSRNGFADMAADIA 55

Query: 54  ----NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
               +Y          +  A     QP+       G+ +  +   +     +  ++  IG
Sbjct: 56  SFFPDYFWVYGPACDMHVEADEGGLQPVRGTRFQFGNMVLSRWPIVSTRTLLLPRSRTIG 115

Query: 110 NLYLPHGN-----------------PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG 152
            + L  G                   +     D++I  ++      +  ++    L   G
Sbjct: 116 KINLQRGATEAVIDAPGGAIRVYSVHLDHVSADERIRQLEFLNAHINAFVQEGGSLTGGG 175

Query: 153 DYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHD----------TH 202
           ++++   P      I+ + +         +        +    R              + 
Sbjct: 176 EFDLPEPPLPEDYVIMGDFNMEPESPEYCALAGAGGGYYGRVARIGTPVDAFAALKTYSP 235

Query: 203 HLYSFWDYYADSWSKNKGIR--IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
             YS+ D       ++ G R  +D+  +S    S L SA IDT+  G    SDH P+ V 
Sbjct: 236 ESYSWMD------PEDHGKRMHLDYCFVSCGLQSRLKSAWIDTQSVG----SDHFPLWVE 285

Query: 261 L 261
           +
Sbjct: 286 I 286


>gi|89900093|ref|YP_522564.1| endonuclease/exonuclease/phosphatase [Rhodoferax ferrireducens
           T118]
 gi|89344830|gb|ABD69033.1| Endonuclease/exonuclease/phosphatase [Rhodoferax ferrireducens
           T118]
          Length = 252

 Score = 61.0 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/289 (13%), Positives = 80/289 (27%), Gaps = 53/289 (18%)

Query: 1   MSVVTVATWNVN----SI----RARIHNLAAWIKENNPDIICLQETKT---EDKNFPFET 49
           M++V VAT+N++     I    R  IHNL   +++ + DI+CLQE +     +       
Sbjct: 1   MNIVRVATYNIHKGVQGIGPQRRLEIHNLGHAVEQLDSDIVCLQEVRLLNRREAQ----- 55

Query: 50  LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
                           +    L+      +               + + + +        
Sbjct: 56  --------HFTRWPELSQAEFLAPEGYEAVYHTNAFTRHGEHGNAMLSRWPVVAYQQEDI 107

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
           +                   + +R L      +      +      +I          + 
Sbjct: 108 S----------------DHRFEQRGLLHVEVLVHGRAVHVVVVHLGLIKASRARQIAQLQ 151

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR-----ID 224
              A     +           +   ++   D  +L +F      +       R     +D
Sbjct: 152 RFVAREVPPMAPLLVAGDFNDWGSLVQRALDATNLKTF----TGARHPTYPARLPLVQLD 207

Query: 225 HIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDS 273
           ++        L        + R W++ SDH P+I    +PE       S
Sbjct: 208 YVYA-RGLVPLGVQV---PQGRIWSRMSDHLPLIAEFGLPEIEPSPDRS 252


>gi|7023883|dbj|BAA92119.1| unnamed protein product [Homo sapiens]
          Length = 362

 Score = 61.0 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 46/285 (16%), Positives = 82/285 (28%), Gaps = 59/285 (20%)

Query: 2   SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           S+ ++ TWN++ +       RAR   + +++   +PD+I LQE        P        
Sbjct: 112 SMFSLITWNIDGLDLNNLSERAR--GVCSYLALYSPDVIFLQEV------IPP------- 156

Query: 55  YHIETCGQKSYNGVAI-LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
           Y+     + S   +     +     I+       L  Q      +  +    L +     
Sbjct: 157 YYSYLKKRSSNYEIITGHEEGYFTAIMLKKSRVKLKSQEIIPFPSTKMMRNLLCVHVNVS 216

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
            +   + ++  +         +      L+               Q       +I+  D 
Sbjct: 217 GNELCLMTSHLESTRGHAAERMNQLKMVLK-------------KMQEAPESATVIFAGDT 263

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG------IRIDHIM 227
                       L N             H  Y+ WD   +S   N G      +R D I 
Sbjct: 264 NLRDREVTRCGGLPNNIVDVWEFLGKPKHCQYT-WDTQMNS---NLGITAACKLRFDRIF 319

Query: 228 LSPEATSLLHSARIDT---KPRGWTK------PSDHTPVIVSLDI 263
                 +      I        G  K      PSDH  ++ +LDI
Sbjct: 320 ----FRAAAEEGHIIPRSLDLLGLEKLDCGRFPSDHWGLLCNLDI 360


>gi|7578789|gb|AAF64144.1|AF223469_1 AD022 protein [Homo sapiens]
          Length = 362

 Score = 61.0 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 46/285 (16%), Positives = 82/285 (28%), Gaps = 59/285 (20%)

Query: 2   SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           S+ ++ TWN++ +       RAR   + +++   +PD+I LQE        P        
Sbjct: 112 SMFSLITWNIDGLDLNNLSERAR--GVCSYLALYSPDVIFLQEV------IPP------- 156

Query: 55  YHIETCGQKSYNGVAI-LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
           Y+     + S   +     +     I+       L  Q      +  +    L +     
Sbjct: 157 YYSYLKKRSSNYEIITGHEEGYFTAIMLKKSRVKLKSQEIIPFPSTKMMRNLLCVHVNVS 216

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
            +   + ++  +         +      L+               Q       +I+  D 
Sbjct: 217 GNELCLMTSHLESTRGHAAERMNQLKMVLK-------------KMQEAPESATVIFAGDT 263

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG------IRIDHIM 227
                       L N             H  Y+ WD   +S   N G      +R D I 
Sbjct: 264 NLRDREVTRCGGLPNNIVDVWEFLGKPKHCQYT-WDTQMNS---NLGITAACKLRFDRIF 319

Query: 228 LSPEATSLLHSARIDT---KPRGWTK------PSDHTPVIVSLDI 263
                 +      I        G  K      PSDH  ++ +LDI
Sbjct: 320 ----FRAAAEEGHIIPRSLDLLGLEKLDCGRFPSDHWGLLCNLDI 360


>gi|298204355|gb|ADI61826.1| endonuclease-reverse transcriptase [Bombyx mori]
          Length = 988

 Score = 61.0 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 49/279 (17%), Positives = 78/279 (27%), Gaps = 22/279 (7%)

Query: 5   TVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
            +  WNV   R      R+  +A  ++E N  I+ L ET+     F  ET     Y +  
Sbjct: 23  RIGCWNV---RTMTRLERLPQVAKVMQEYNIHILGLSETRWN--GF-GETQCDFGYSLLY 76

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            G++                          V  R I A F+   + + +   Y P  +  
Sbjct: 77  SGKEEDATREYGVGLLLSRSAKSSLLSWKPVSERIICARFSTRVRKVTVIQCYAPTNSAS 136

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
           T  K                Q + +                 + Y               
Sbjct: 137 TDVKSQFYEQLGHTLKGIKKQDIVI-LMGDINAKMGNDNVDREYYMGQYGATGTINENGE 195

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
                   +          H   H  ++     D  +KN+   IDH+ +S    S L   
Sbjct: 196 LFGDLCSTHGLVIGGTLFKHKECHKVTWIS--PDGKTKNQ---IDHVAISKTWRSSLLDV 250

Query: 240 RIDTKPRGWTKPSDHTPVIVS--LDIPEPRKKQQDSTSQ 276
                 RG    SDH  V+    L I  P +K   +  +
Sbjct: 251 ---RNKRGADIDSDHHLVVAEVRLKIAVPHRKPDKAARK 286


>gi|218131485|ref|ZP_03460289.1| hypothetical protein BACEGG_03103 [Bacteroides eggerthii DSM 20697]
 gi|317476445|ref|ZP_07935694.1| endonuclease/Exonuclease/phosphatase [Bacteroides eggerthii
           1_2_48FAA]
 gi|217986417|gb|EEC52754.1| hypothetical protein BACEGG_03103 [Bacteroides eggerthii DSM 20697]
 gi|316907471|gb|EFV29176.1| endonuclease/Exonuclease/phosphatase [Bacteroides eggerthii
           1_2_48FAA]
          Length = 366

 Score = 61.0 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/271 (14%), Positives = 81/271 (29%), Gaps = 27/271 (9%)

Query: 4   VTVATWNVNSIRARIHN-----LAAWIKENNPDIICLQET-------KTEDKNFPFETLQ 51
           +   ++N+              +  ++KE+N DI+CLQE            K+   E L+
Sbjct: 102 IKFLSYNIMGFDGANKRNGKNPILTYLKESNADILCLQEYASDESHRHLTQKDIERE-LK 160

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
              YH              ++ Y    I++    +        +     ++  T+ + N 
Sbjct: 161 DYPYHRINVVGSGSGYSNKIACYSKFPILSARVLNYTSNYNGSVLYELKLDEDTITLINN 220

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
           +L       + K   +            ++++    L+               + I  E 
Sbjct: 221 HLESNKLTKTDKDIYEDMLK----APEKEKVKSGARLLVRKLAEASAIRAPQADTIAKEI 276

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG---IRIDHIML 228
            +     +                    + +  ++         S N+     RID+I++
Sbjct: 277 ASSRHPSIIVCGDFNDTPISYTHRVIAQNLNDAFTQ-SGRGLGVSYNQNKFYFRIDNILI 335

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
           S    S   +  +D       K SDH P+  
Sbjct: 336 SKNLQSY--NCTVDQSI----KESDHYPIWC 360


>gi|253563360|ref|ZP_04840817.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|251947136|gb|EES87418.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
          Length = 285

 Score = 61.0 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/277 (14%), Positives = 81/277 (29%), Gaps = 33/277 (11%)

Query: 2   SVVTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52
           S V VAT+N+         NS + R   +  +I+E +PD++ +QE    +     + L  
Sbjct: 25  SHVRVATFNIRYDNLGDSLNSWKYRKEKVCEFIREKHPDVLGMQEV--LNHQL-KDLLSG 81

Query: 53  L-NYHIETCGQKSYNGVAILSKYQPIEIVTH----LPGDDLDVQARFIEATFTINTQTLR 107
           L +Y     G++        +     +              +      +  +      + 
Sbjct: 82  LPDYAYVGVGREDGKTQGEYAPVFYRKDKYDLLDSNTFWLSEHPDSIGKLGWDAACTRVA 141

Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167
                            +     +    R  S  L +++    AG +  +       +  
Sbjct: 142 TWAKLKDKTTGKEFLMLNTHFDHVGTEARRNSALLIIDKIKEIAGTHPAMMTGDFNVSEE 201

Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDY-YADSWSKNKGIRIDHI 226
                   + E                      +   Y+F D+       + K   ID I
Sbjct: 202 WEAYKTITSNEFVLKDAWKIAGK---------QSGENYTFHDFGRVPVAEREK---IDFI 249

Query: 227 MLSPEATSLLHSARID-TKPRGWTKPSDHTPVIVSLD 262
            ++P+    +  A I  +     T  SDH   +  L+
Sbjct: 250 FVTPQI--KVADAEIISSAITDSTYLSDHNAHLADLE 284


>gi|328708466|ref|XP_003243695.1| PREDICTED: craniofacial development protein 2-like [Acyrthosiphon
           pisum]
          Length = 367

 Score = 61.0 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 41/270 (15%), Positives = 78/270 (28%), Gaps = 20/270 (7%)

Query: 4   VTVATWNVNSI-RA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + +ATWN  S+ R     NL   +      II LQE +   K      L+   Y +   G
Sbjct: 52  IKIATWNTLSLYRTGACQNLTDVLDTYGIQIIALQEIRWPGKG----QLKVGKYIVYFSG 107

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
            +  +                   + +  +   +          L   +     G     
Sbjct: 108 MEEGHAFGCGFAVHESLEPYVKEFNPISERITLLRVDTKPLNIILVCVHAPTETGEENMK 167

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAG-DYNIIPQPHDCYNPIIWENDACFTLEVR 180
             + + +S I   L     +L + +     G + + +P             +    +   
Sbjct: 168 DVFYEDLSQIYDKLPGNVIKLVIGDLNAKCGKETHFMPMIGKESLHETSNGNGLRLISFA 227

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            +           +    H T H  ++     D  + N+   IDHI++     S +    
Sbjct: 228 AAKDM-----IISSTTFPHKTIHKATWKS--PDGTTCNQ---IDHILVQKRFRSCIKDI- 276

Query: 241 IDTKPRGWTKPSDHTPVIVSLDIPEPRKKQ 270
                RG    SDH  ++    +     K 
Sbjct: 277 --HSFRGADCDSDHFLLVAKFRLKIQSDKS 304


>gi|260891468|ref|ZP_05902731.1| endonuclease/exonuclease/phosphatase family protein [Leptotrichia
           hofstadii F0254]
 gi|260858851|gb|EEX73351.1| endonuclease/exonuclease/phosphatase family protein [Leptotrichia
           hofstadii F0254]
          Length = 246

 Score = 61.0 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/271 (14%), Positives = 73/271 (26%), Gaps = 51/271 (18%)

Query: 5   TVATWNV------NSIRARIHNLAAWIKENNPDIICLQET-----KTEDKNFPFETLQSL 53
            + T+N+      N        L   IK   PD + LQE      ++  ++   +  + L
Sbjct: 14  KIMTYNIYGGRLTNG-----QKLGESIKPYEPDFVSLQEVDKFTKRSNFRDITSDIAKVL 68

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
            Y      +               +                 +    +   + +     +
Sbjct: 69  GYDYYFFKKSRDYDGGEYGISFISKYPLEKIYTYELPSEGVEKRQLIVAELSKKTFGKKV 128

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
              N     K   K       L   ++  + ++    +GD+N +P               
Sbjct: 129 LVMNTHLDFKQQIKP-EEMESLDLLTKFFDKDDIKFLSGDFNFLPT------------TK 175

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
            +    +           +     +                       RID+I  S    
Sbjct: 176 YYGEITKDWRDTYMESNASGVRTLSDP---------------------RIDYIFGSQSKK 214

Query: 234 SLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
             + S+  I+   + WTK SDH P I  LDI
Sbjct: 215 WKVKSSYFINDATQDWTKLSDHLPYITVLDI 245


>gi|332184956|ref|ZP_08386705.1| endonuclease/Exonuclease/phosphatase family protein [Sphingomonas
           sp. S17]
 gi|332014680|gb|EGI56736.1| endonuclease/Exonuclease/phosphatase family protein [Sphingomonas
           sp. S17]
          Length = 231

 Score = 61.0 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/264 (12%), Positives = 69/264 (26%), Gaps = 41/264 (15%)

Query: 3   VVTVATWNVN-SI----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57
           ++ VA++N+   I    R     +   ++E + DI+ LQE                    
Sbjct: 1   MIKVASYNIRKGIGADRRRNPDRILDVLREVDADIVALQE-------------------- 40

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
                 +           P+ ++         +      +        L   +  +    
Sbjct: 41  ------ADRRFGEREGVLPLHLIEDHSDWKPIIYGMKARSLGWHGNTLLVRKSTRVLDFE 94

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
            I     + + + +      A     +   L  +G +          +     +     +
Sbjct: 95  AIHLPSLEPRGAVMADLSTDAGILRIVGMHLDLSGLWRRRQAGAILSHLASCLHQHPTVM 154

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
               +          D  R         SF              R+D IM+SPE    + 
Sbjct: 155 MGDLNEWTRGAGCLRDFARDFTFADTGPSFHARRPIG-------RLDRIMVSPEL--RVM 205

Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261
           +  +        K SDH P+   +
Sbjct: 206 ACGVHASATSR-KASDHLPIWAKI 228


>gi|82753625|ref|XP_727754.1| endonuclease/exonuclease/phosphatase [Plasmodium yoelii yoelii str.
           17XNL]
 gi|23483752|gb|EAA19319.1| Endonuclease/Exonuclease/phosphatase family [Plasmodium yoelii
           yoelii]
          Length = 277

 Score = 61.0 bits (146), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/238 (16%), Positives = 70/238 (29%), Gaps = 27/238 (11%)

Query: 6   VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + N+N + + I    L  W+ + +P   CLQET   +K+  +  ++      +  G K
Sbjct: 17  LISLNINGLNSPIKRHRLTDWLHKQDPTFCCLQETHLREKDRHYLRVKGWKTIFQANGLK 76

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
              GVAIL   +                              + I    L     I +  
Sbjct: 77  KQAGVAILISDKIDFQPK--------------VIKKDKEGHFILIKGKILQEELSILNIY 122

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
             +  +           +  +    I  GD+N      D         D     E  +  
Sbjct: 123 APNARAATFIRDTLVKLKAYIAPHTIIVGDFNTPLSSKDRSWKQKLNRDTVKLTEAMKQM 182

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
                   TD  R  +     Y+F+     ++SK     IDH +      +      I
Sbjct: 183 ------DLTDIYRTFYPKTKRYTFFSAPHGTFSK-----IDHKIGHKTGLNRYKKIEI 229


>gi|290993621|ref|XP_002679431.1| predicted protein [Naegleria gruberi]
 gi|284093048|gb|EFC46687.1| predicted protein [Naegleria gruberi]
          Length = 531

 Score = 60.6 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/308 (12%), Positives = 83/308 (26%), Gaps = 48/308 (15%)

Query: 2   SVVTVATWNV-----NSIRARIHNLAAWIKENNPDIICLQETKTEDK-------NFPFET 49
           + + + ++N+     N I+ R+  +   I+ N PD+IC QE + ++K       NF    
Sbjct: 224 TSLKIMSYNIHNYEGNWIK-RLMKMIKVIERNQPDVICFQEVRLDEKKDLKKLNNFHEFI 282

Query: 50  LQS-------------LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDV----QA 92
            +              L Y                    P      L             
Sbjct: 283 FEDEYQLIHIKKALSQLGYIHYHSRPAMSYVQPFYMDVPPTMQEEGLAIFSKYPIIEADY 342

Query: 93  RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG 152
             +    + ++   RI          + S    D  +           +  L+       
Sbjct: 343 TLLYRDLSDSSTHQRICVRARILIPHMNSFITADIFNTHLSLKEHERNQNVLDINRFANL 402

Query: 153 DYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH-------DTHHLY 205
           +              +   D     +       L +  +TD+  +              +
Sbjct: 403 NVESSSSSSGKPTIQVVCGDFNLEPQEAAYSNMLIDGKWTDSYISMRNSLSHTSKLLDEF 462

Query: 206 SFWDYYADSWSKNKGIRIDHIM----------LSPEATSLLHSARIDTKPRGWTKPSDHT 255
           +  +    S + +   RID+I+          +S        ++    +   +  PSDH 
Sbjct: 463 TLANELTFSTNGDYKKRIDYILFRDFGSSIVNVSNFIIDG-KASEYHYENDPYKAPSDHH 521

Query: 256 PVIVSLDI 263
            V+    I
Sbjct: 522 AVVTEFTI 529


>gi|197120014|ref|YP_002140441.1| endonuclease/exonuclease/phosphatase family protein [Geobacter
           bemidjiensis Bem]
 gi|197089374|gb|ACH40645.1| endonuclease/exonuclease/phosphatase family protein [Geobacter
           bemidjiensis Bem]
          Length = 249

 Score = 60.6 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 42/278 (15%), Positives = 75/278 (26%), Gaps = 57/278 (20%)

Query: 5   TVATWNVNSIRARI---------HNLAAWIKENNPDIICLQET---KTEDK------NFP 46
           T+ T+NV+    R+           +A  I    PDI+CLQE    +   +      N  
Sbjct: 9   TIMTYNVH----RLIGNDRHSSAPRIAEVIHTYQPDIVCLQELPGARVRPEVGGACQNLV 64

Query: 47  FE-TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT 105
            E  L           ++ +  V + S++    +           +         +    
Sbjct: 65  HELALLETGGRHFFLERERWGKVVL-SRFPMRLVQAGGLHPQNRYRTVVPRGVLWVEVDL 123

Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165
              G         +  T  +                 +   P+   GD+N +P       
Sbjct: 124 F--GQKLQVVNVHLGLTPQERNSQVKVLTGPEWLSHPDCRPPVALCGDFNTLPSSTIHKQ 181

Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225
                               L +          H     ++F             +R DH
Sbjct: 182 ----------------LKNALMDEQEKLKFGHNH-----FTFPSKLPM-------VRFDH 213

Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           I +SP+    +    I          SDH P++V L +
Sbjct: 214 IFVSPDLV--VEEELIPRTKLTGA-ASDHLPLVVRLRL 248


>gi|237726359|ref|ZP_04556840.1| conserved hypothetical protein [Bacteroides sp. D4]
 gi|229434885|gb|EEO44962.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
          Length = 353

 Score = 60.6 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/264 (14%), Positives = 77/264 (29%), Gaps = 19/264 (7%)

Query: 2   SVVTVATWNVNSIRARI-----HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56
           + + + T+NV+S    I        A  + +   D++C QE +  + +F  + LQ  N +
Sbjct: 101 NRLKIVTYNVHSFGNEITGFSAKEFAEMMNKEETDVLCFQEYRG-NGDFTEQDLQ--NTY 157

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
            +T            + Y    I      +  +     I A   +   T+RI N+++   
Sbjct: 158 AKTFPYSFIPEGLSQAIYSRYPIKQSQTIEFPNTNNGAIWADLDVKGMTIRIINVHMQTT 217

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
           N         +    +   +  +  L+  +                       E      
Sbjct: 218 NFDRMRSKAAQARGAQDEEQERAIYLDYSDNFRENTVRRAGQAEQISSLINATEYPLIVC 277

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
            +                ++    T        Y A     +  +RID++  S      +
Sbjct: 278 GDFNDPPGTFTYETLKSGLKDGFQTAGE----GYGATYRGVHHLLRIDYLFHS-TLLEGI 332

Query: 237 HSARIDTKPRGWTKPSDHTPVIVS 260
               I          SDH PV + 
Sbjct: 333 KYKVIPYD------MSDHNPVYLE 350


>gi|254472835|ref|ZP_05086234.1| endonuclease/exonuclease/phosphatase [Pseudovibrio sp. JE062]
 gi|211958299|gb|EEA93500.1| endonuclease/exonuclease/phosphatase [Pseudovibrio sp. JE062]
          Length = 289

 Score = 60.6 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/297 (12%), Positives = 69/297 (23%), Gaps = 48/297 (16%)

Query: 4   VTVATWNVN---SIR-----ARIHNLAAWIKENNPDIICLQET----KTEDKNFP-FETL 50
           + + ++N+     I      ARI       +    DII LQE     K  + N      L
Sbjct: 1   MKIVSYNIQYGTGIDGKVDLARIAG-----ELEGADIIGLQEVDRFWK-RNGNVDQAAEL 54

Query: 51  QSL--NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108
             L   Y          +        + +          L         T+ +       
Sbjct: 55  ADLLGGYRWVYGPGLDMDASFHDENGKLVNRRRQHGEMILSKYPIISTRTYPLPKMGSIT 114

Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168
            +                 +      L + S    L +           P     +    
Sbjct: 115 RHAIQAALLEAVIDAPGGPLRVYNTHLFYWSPDFALVQAQFVRDRIKTAPSEGGAWCGGP 174

Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADS-------------W 215
             +      E + +      +            + +++                     W
Sbjct: 175 GIDAHWLNDEPQPTMPTDCILLGDMNNGPGTPVYEVFTGPPSEEGGRVQTLDGFVDPWVW 234

Query: 216 SKNKGI----------RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
             N+ +          RIDH+ +       +    +D       K SDH PV + L 
Sbjct: 235 LGNEEMSGKTAHFDTRRIDHVFVGASLRHRIAGMWVDEDA----KGSDHLPVWLELK 287


>gi|158521790|ref|YP_001529660.1| endonuclease/exonuclease/phosphatase [Desulfococcus oleovorans
           Hxd3]
 gi|158510616|gb|ABW67583.1| Endonuclease/exonuclease/phosphatase [Desulfococcus oleovorans
           Hxd3]
          Length = 261

 Score = 60.6 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 42/252 (16%), Positives = 65/252 (25%), Gaps = 28/252 (11%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL--NYHIETCGQKSYNGVAILSKY 74
           R        K+  PD I +QE       F       L  +YH       +  G      +
Sbjct: 33  RKPAFVELFKQYRPDFIGMQEV----NGFQAAFFAGLLSDYHAIGKRTPAPAG------W 82

Query: 75  QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRF 134
           Q + I  H   +  D    F+  T  I           +P                  R 
Sbjct: 83  QDVLIFYHKNWECRDCDRFFLSDTPDI--------PSRMPDSRWPRQCVMGTFEKEGLRM 134

Query: 135 LRFASQRLELEEPLIFAGDYNIIPQPH--DCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192
           +   +     E   + +    +       +   P++   D                   T
Sbjct: 135 VCVNTHFDFDEPVQVKSAAILLARLEKFSNTALPVLITGDFNAGPGSDCHRAFTHPGRLT 194

Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPS 252
                  D  +  +F  +  D+ S     RID I+            RI T       PS
Sbjct: 195 RPFFDVFDGDNSGTFHKFTGDAVSD----RIDWILCRNMGGPREK--RIITDRFAGIFPS 248

Query: 253 DHTPVIVSLDIP 264
           DH PV     + 
Sbjct: 249 DHFPVYAEFSLD 260


>gi|237712213|ref|ZP_04542694.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|229453534|gb|EEO59255.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
          Length = 353

 Score = 60.6 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/264 (14%), Positives = 77/264 (29%), Gaps = 19/264 (7%)

Query: 2   SVVTVATWNVNSIRARI-----HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56
           + + + T+NV+S    I        A  + +   D++C QE +  + +F  + LQ  N +
Sbjct: 101 NRLKIVTYNVHSFGNEITGFSAKEFAEMMNKEETDVLCFQEYRG-NGDFTEQDLQ--NTY 157

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
            +T            + Y    I      +  +     I A   +   T+RI N+++   
Sbjct: 158 AKTFPYSFIPEGLSQAIYSRYPIKQSQTIEFPNTNNGAIWADLDVKGMTIRIINVHMQTT 217

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
           N         +    +   +  +  L+  +                       E      
Sbjct: 218 NFDRMRSKAAQARGAQDEEQERAIYLDYSDNFRENTVRRAGQAEQISSLINATEYPLIVC 277

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
            +                ++    T        Y A     +  +RID++  S      +
Sbjct: 278 GDFNDPPGTFTYETLKSGLKDGFQTAGE----GYGATYRGVHHLLRIDYLFHS-TLLEGI 332

Query: 237 HSARIDTKPRGWTKPSDHTPVIVS 260
               I          SDH PV + 
Sbjct: 333 KYKVIPYD------MSDHNPVYLE 350


>gi|34392553|dbj|BAC82605.1| pol-like protein [Tetraodon nigroviridis]
          Length = 1318

 Score = 60.6 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/261 (15%), Positives = 77/261 (29%), Gaps = 26/261 (9%)

Query: 1   MSVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           M    V T NVN  R       +    +    +++ LQET +++ N      +     + 
Sbjct: 22  MESFRVGTLNVNGARVAEKRALVFDTARRKRVEVLFLQETYSDEHNQADWAKEWEGQVVL 81

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
           +    +  GV +L               +  V+ R +  T   N +T+   N+Y P    
Sbjct: 82  SHLSTASGGVGLLFLRSFTPT---SVEVEHVVKGRCLLVTACFNERTVVFINVYAPTNGT 138

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
              +  +   + + R        +  +         +         +             
Sbjct: 139 ERKSFLEKVSARLNRCGPEDFLIMGGDFNCTECEFVDRNHAEPHPGS------------- 185

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
                Q + + G  DA R  H     Y+ W    +        R+D   +     + L S
Sbjct: 186 QHALKQLVHSHGLVDAWRRMHADCRQYT-WSRLGEDRISMA--RLDRFYVFKHHFNALKS 242

Query: 239 ARIDTKPRGWTKPSDHTPVIV 259
             I          +DH+ V+ 
Sbjct: 243 CSI-----TPAGFTDHSLVLC 258


>gi|256833418|ref|YP_003162145.1| Endonuclease/exonuclease/phosphatase [Jonesia denitrificans DSM
           20603]
 gi|256686949|gb|ACV09842.1| Endonuclease/exonuclease/phosphatase [Jonesia denitrificans DSM
           20603]
          Length = 260

 Score = 60.6 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/261 (13%), Positives = 67/261 (25%), Gaps = 21/261 (8%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + VA++NV    A    L   +K  + D++ LQE     ++F          H       
Sbjct: 19  LRVASYNVKGFAADRRALWQVLKNLDADVLALQE---PPRSFQGPARLRALAHSLHMECV 75

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
              G         + +   +    +   AR +          L     +           
Sbjct: 76  VPGGYPFGGVTTALLVADRISSSVVAAGARVLPWGLPQWWPQLVDRPSWPSRRGFSWVDV 135

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
            +  +      L  A +       +    ++                 D           
Sbjct: 136 GNVVVVSAHLGLNPAERVRHGRIIMDAVNEWGSERTIVA--------GDLNEEPGGPVWE 187

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
                +        +       +F  + A         RID I +   A   +  +    
Sbjct: 188 LCDSLLPDARPRALSASPDVAVTFPSHRAR-------RRIDSIFVPSRA---VVWSFEVR 237

Query: 244 KPRGWTKPSDHTPVIVSLDIP 264
                +  SDH PV++ +D+P
Sbjct: 238 AGAAVSAASDHRPVVIEVDVP 258


>gi|291222560|ref|XP_002731284.1| PREDICTED: Transposon TX1 uncharacterized 149 kDa protein-like
           [Saccoglossus kowalevskii]
          Length = 884

 Score = 60.6 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/266 (14%), Positives = 73/266 (27%), Gaps = 35/266 (13%)

Query: 2   SVVTVATWNVNSIR---ARIHNLAAWIKENNP-DIICLQETKT--EDKNFPFETLQSLNY 55
           S +T +T NVN+ R    R      ++K N+P D   LQET +  +D+N      +    
Sbjct: 3   SSITCSTLNVNNCRDSFKRYKTF-EFLKRNHPCDFYLLQETHSLPQDENTWRLIWRGDG- 60

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
            + + G  +  GVAIL K +    +                         + +       
Sbjct: 61  -VFSHGTSNSAGVAILFKPKTKVDIIAKHDVQPGRLIHVHARVNNTPIHIINVYAPTNGP 119

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
               +       ++ +                                            
Sbjct: 120 ERLESFQMLKRNLNTLSDDPIIIGGDFNCTTAPDV----------------DRNGGSEPD 163

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
                     ++     D  R  H     YS+          N  +R+D   ++    + 
Sbjct: 164 VRTSNLLSTIMRWFKLVDGWRHYHGDTKQYSW-------GRGNTLVRLDRFYINKHLCNK 216

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
           + +  I          SDH+ V +++
Sbjct: 217 VKTVEIHNSSLAL---SDHSLVFINI 239


>gi|56961986|ref|YP_173708.1| hypothetical protein ABC0204 [Bacillus clausii KSM-K16]
 gi|56908220|dbj|BAD62747.1| conserved hypothetical protein [Bacillus clausii KSM-K16]
          Length = 295

 Score = 60.6 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/278 (14%), Positives = 78/278 (28%), Gaps = 34/278 (12%)

Query: 4   VTVATWNV----------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFP--FETLQ 51
           + V ++N+          +S   R   + ++++   PDI+  QE            E L 
Sbjct: 35  MKVMSFNLRNSGGNDPSPHSWSERRPTVQSFLETEEPDILGTQE--ALYDQVTHLDEDLP 92

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
              +        +      +         T      L      + +T   NT    +   
Sbjct: 93  DYEWIGIGREGGTDGEFMAIYYKSDRFKPTDTGHYWLSDTPDVVGSTSWGNTIPRMVTWA 152

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
                    + +    ++         S++   E  +            +D   PII   
Sbjct: 153 ---KFEEEATGEQFYFVNTHFDHQSEESRQKSAELIIE-------KINEYDENLPIILTG 202

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRA----THDTHHLYSFWDYYADSWSKNKGIRIDHIM 227
           D   T +            F D         ++    ++ ++      + NK   ID ++
Sbjct: 203 DFNTTPDSVSHGILTGEGLFEDPWNYAEEKINEELGTFNGFNDPTGGGTDNK---IDWVL 259

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
                   +    I+    G   PSDH PVI    + E
Sbjct: 260 TKNIFAESI---GINDYRNGEQYPSDHFPVIAEFKLGE 294


>gi|212691340|ref|ZP_03299468.1| hypothetical protein BACDOR_00832 [Bacteroides dorei DSM 17855]
 gi|265751906|ref|ZP_06087699.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
 gi|212666093|gb|EEB26665.1| hypothetical protein BACDOR_00832 [Bacteroides dorei DSM 17855]
 gi|263236698|gb|EEZ22168.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
          Length = 353

 Score = 60.6 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/264 (14%), Positives = 77/264 (29%), Gaps = 19/264 (7%)

Query: 2   SVVTVATWNVNSIRARI-----HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56
           + + + T+NV+S    I        A  + +   D++C QE +  + +F  + LQ  N +
Sbjct: 101 NRLKIVTYNVHSFGNEITGFSAKEFAEMMNKEETDVLCFQEYRG-NGDFTEQDLQ--NTY 157

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
            +T            + Y    I      +  +     I A   +   T+RI N+++   
Sbjct: 158 AKTFPYSFIPEGLSQAIYSRYPIKQSQTIEFPNTNNGAIWADLDVKGMTIRIINVHMQTT 217

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
           N         +    +   +  +  L+  +                       E      
Sbjct: 218 NFDRMRSKAAQARGAQDEEQERAIYLDYSDNFRENTVRRAGQAEQISSLINATEYPLIVC 277

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
            +                ++    T        Y A     +  +RID++  S      +
Sbjct: 278 GDFNDPPGTFTYETLKSGLKDGFQTAGE----GYGATYRGFHHLLRIDYLFHS-TLLEGI 332

Query: 237 HSARIDTKPRGWTKPSDHTPVIVS 260
               I          SDH PV + 
Sbjct: 333 KYKVIPYD------MSDHNPVYLE 350


>gi|260063471|ref|YP_003196551.1| hypothetical protein RB2501_01645 [Robiginitalea biformata
           HTCC2501]
 gi|88782915|gb|EAR14089.1| hypothetical protein RB2501_01645 [Robiginitalea biformata
           HTCC2501]
          Length = 332

 Score = 60.6 bits (145), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 45/270 (16%), Positives = 79/270 (29%), Gaps = 47/270 (17%)

Query: 4   VTVATWN---V-------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + +A++N   V         +R  + ++       N DI+C QE     + +    +   
Sbjct: 97  LRIASFNSGNVLAEADNPAGLRTAMEDI-------NADILCFQEL----ERYGSFDVSRY 145

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
            Y   +      +  AI S+Y    IV     D  D     I A   +   T+RI N++L
Sbjct: 146 PYRAFSPEIIGKSTQAIFSEYP---IVRSGSIDFPDTSNNAIFADVAVKGDTIRIYNVHL 202

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
                 +      +          A     + +  +        P P           D 
Sbjct: 203 ESYRIRSERILYREYGGWFLRRFRAVAGQHVSQARLVKAHQQEAPYPTIIC------GDF 256

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
             T      ++ L         +A       YS          +    RID+I+      
Sbjct: 257 NATPFSHT-YRILSAGLEDSFGQAGSGIGATYS---------LRGLPYRIDYILADSRM- 305

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                  +          SDH PV+ +L +
Sbjct: 306 ------EVLHHKIFDIHLSDHRPVMATLRL 329


>gi|254446687|ref|ZP_05060162.1| endonuclease/exonuclease/phosphatase family [Verrucomicrobiae
           bacterium DG1235]
 gi|198256112|gb|EDY80421.1| endonuclease/exonuclease/phosphatase family [Verrucomicrobiae
           bacterium DG1235]
          Length = 281

 Score = 60.6 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/286 (10%), Positives = 70/286 (24%), Gaps = 40/286 (13%)

Query: 4   VTVATWNVNSIR----------AR-----IHNLAAWIKENNPDIICLQETKTEDKNFPFE 48
           + + T+N+   R          AR     +  +A  I+E  PDI+ LQE           
Sbjct: 8   IKLMTFNIAHGRGLSLYQGFSSARTISKNLDRIAHIIREQQPDIVALQEI---------- 57

Query: 49  TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108
                     +      N +  L       +  H   +  D +         ++   ++ 
Sbjct: 58  -------DASSHWNGHINLLDYLQSATDYPVSIHGIHNRRDGRKPLAYGNAFLSKFPVKD 110

Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168
             +       +    + +                                        + 
Sbjct: 111 WKVVSFGEKKLGEKGFLEACFLADGTEIDVINLHLDFRSRRTRLRQVDQLIASIHQRSLA 170

Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR-IDHIM 227
                   +    +     +      +         Y ++     ++  +   R +D I+
Sbjct: 171 DPYHLPPIICGDFNTSSRSSSDALHQLIERSAGEEDYHYFPKRERTFPAHFPSRGLDFIL 230

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDS 273
           L+        +  +          SDH PV+ ++  PE       S
Sbjct: 231 LAAPFE--AENTEVIKS-----FASDHLPVLSTISAPEKWPASDPS 269


>gi|167752898|ref|ZP_02425025.1| hypothetical protein ALIPUT_01160 [Alistipes putredinis DSM 17216]
 gi|167659967|gb|EDS04097.1| hypothetical protein ALIPUT_01160 [Alistipes putredinis DSM 17216]
          Length = 385

 Score = 60.6 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/269 (13%), Positives = 71/269 (26%), Gaps = 24/269 (8%)

Query: 4   VTVATWNVNSI-RAR----IHNLAAWIKENNPDIICLQE-----TKTEDKNFPFETLQSL 53
           +T+ T+NV S    R       +   I+  NPDI+CLQE     +K E+ +     L   
Sbjct: 125 ITLLTFNVRSFYNDRGQWSFDGVTEVIRRVNPDIVCLQEFNRTSSKAEELD---SLLSDY 181

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFI-EATFTINTQTLRIGNLY 112
           +  +   G +      +    +   +           Q          +   T+RI N +
Sbjct: 182 DRTVVMEGNRRDPVFPLALYTKYRILGKSHSILGPMKQDGQSVWVDLLVGDDTIRIFNNH 241

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
           L                         ++   +                            
Sbjct: 242 LHSTAITVHDDKYLSEHQFLTDTAGGAKIKNIFRRFRDNSMLRAAQADTIARAIAATPGC 301

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                +   +            +            + Y    +     +RID+++ S + 
Sbjct: 302 KIVCGDFNDTPMSYTYRVMAQDLDDAFRASGK--GYSYTFRGFMDV--LRIDYVLYSEDL 357

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
                  ++          SDH PV+V L
Sbjct: 358 E--CLDYQVLYDV----DLSDHYPVVVRL 380


>gi|147832919|emb|CAN70669.1| hypothetical protein VITISV_037506 [Vitis vinifera]
          Length = 2825

 Score = 60.6 bits (145), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 23/38 (60%), Gaps = 2/38 (5%)

Query: 4   VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETK 39
           + + +WNV  + +R     +  +++  NPD++ +QETK
Sbjct: 621 MKIISWNVRGLGSRNKRRVVKDFLRLENPDVVMIQETK 658


>gi|221116439|ref|XP_002154635.1| PREDICTED: similar to pol-like protein [Hydra magnipapillata]
          Length = 693

 Score = 60.2 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 29/53 (54%), Gaps = 3/53 (5%)

Query: 1  MSVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQ 51
          M++  + T NVN +  ++    + +++K  + DI+C+QET   + N     L+
Sbjct: 1  MAI-KICTLNVNGLNDQVKRGKIMSFLKNLDSDIVCVQETHCTEGNVEKWWLE 52


>gi|23097914|ref|NP_691380.1| hypothetical protein OB0459 [Oceanobacillus iheyensis HTE831]
 gi|22776138|dbj|BAC12415.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
          Length = 402

 Score = 60.2 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 39/257 (15%), Positives = 80/257 (31%), Gaps = 12/257 (4%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQP 76
           R+  L  ++ E +PDII  QE                 Y     G++  +    ++ Y  
Sbjct: 57  RLPVLQEYLLEKDPDIIGTQE--ALYNQVNDVDANLPGYDWIGLGREGGSNGEFMAIYYK 114

Query: 77  IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
            +  T L  D   +     E   T    ++     +    +  T+ ++    +       
Sbjct: 115 EDRFTPLEYDHYWLSDTPKEIGSTSWGNSIPRMVTWAKFEDKETNKQFYFVNT----HFD 170

Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIR 196
             S+   ++   + A   N   +         +            +   L    +  A  
Sbjct: 171 HESENARVKSAELIAERLNDFDEDIPVVLTGDFNTPLESESHQILTADDLFEDPWETAEE 230

Query: 197 ATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTP 256
             ++    ++ ++      + NK   ID ++ +    +   S  ID        PSDH P
Sbjct: 231 KINEDLGTFNGFNDATGGGADNK---IDWVL-TKGIDT--KSVEIDNYQNNGYFPSDHYP 284

Query: 257 VIVSLDIPEPRKKQQDS 273
           VI  L+  E  ++    
Sbjct: 285 VITELNYLEQEEESSPV 301


>gi|85860240|ref|YP_462442.1| endonuclease/exonuclease/phosphatase family protein [Syntrophus
           aciditrophicus SB]
 gi|85723331|gb|ABC78274.1| endonuclease/exonuclease/phosphatase family protein [Syntrophus
           aciditrophicus SB]
          Length = 335

 Score = 60.2 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 38/277 (13%), Positives = 74/277 (26%), Gaps = 24/277 (8%)

Query: 4   VTVATWNVN-SIRA--------RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           + V ++N+    R         R + +   + +  PD++ LQE    D            
Sbjct: 49  LNVMSFNIRRGTRQDGRNHWIYRRNLVREILNQYRPDVLGLQE--ALDFQMSEVCSMLPG 106

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL-RIGNLYL 113
           Y     G    +     + +               +               + RI     
Sbjct: 107 YEKVGIGNLGGSRGLHNAIFYDATRFLISDEGTFWLSDAPDIPASKGWGNIIPRICTWAR 166

Query: 114 PHGNPITSTKYDDKISWIK-----RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168
                     Y             R          + E                  +  I
Sbjct: 167 LVEKKSQQAFYFYNTHLDHISLRARKKSVILLTRHIHERPFTEPLVLTGDFNSRERSAAI 226

Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY-SFWDYYADSWSKNKGIRIDHIM 227
                   L+++   + L  +   D  R  +  +    +F  Y +  +       ID+I 
Sbjct: 227 QYLKGEVPLKIKIKAKVLNPVPLMDTFRVKYPDNRNIATFHGYRSYFFRFK----IDYIF 282

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
           +S    + +  A I  +  G   PSDH P++  +D+P
Sbjct: 283 VSGS--ARVIDAEIIQRRWGKCYPSDHFPLLAHVDLP 317


>gi|163859167|ref|YP_001633465.1| hypothetical protein Bpet4846 [Bordetella petrii DSM 12804]
 gi|163262895|emb|CAP45198.1| conserved hypothetical protein [Bordetella petrii]
          Length = 286

 Score = 60.2 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 45/291 (15%), Positives = 92/291 (31%), Gaps = 32/291 (10%)

Query: 1   MSVVTVATWNVNSIRA---RIHNLAAW---IKENNPDIICLQETK----------TEDKN 44
           MS++ V ++N++  R+   R  +L      +    PD++ LQE +           + ++
Sbjct: 1   MSLIRVVSYNIHKGRSSLGRRESLNDLRLGLYGLRPDLVFLQEVQGRNEHISFLDAQHES 60

Query: 45  FPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
                   + Y       +S +G A+LS+Y  +E       D    Q   + A   ++ +
Sbjct: 61  LAAALRLDVAYGCNAIRNRSDHGNALLSRYAIVEHENQDISDHRLEQRGLLHARIQVDGR 120

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
            +    ++L       + +       I R +      L   +   +      +       
Sbjct: 121 DVHCFVVHLGLFAGSRTRQIQALTDRISRLVPEGDPILVAGDFNDWGDRLAPLFVQQLGL 180

Query: 165 NPIIWENDACFTLEVRQSFQKL----------QNMGFTDAIRATHDTHHLYSFWDYYADS 214
             +          E+ +    +           N                Y        +
Sbjct: 181 YEVFANAPRSHGGELPRLRDSVRRLSNVLRGVPNSVAVLERNNQLGMGGAY-CPLPPPRT 239

Query: 215 WSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
           +       R+D I         + SAR+    R W K SDH P++  L++P
Sbjct: 240 FPAVFPWFRLDRIY-QRGFA--VRSARVLRG-REWAKLSDHAPLLAELELP 286


>gi|301623846|ref|XP_002941224.1| PREDICTED: vomeronasal type-2 receptor 26-like [Xenopus (Silurana)
           tropicalis]
          Length = 956

 Score = 60.2 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 10/90 (11%)

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           Q+   L  +   DA R  +     Y++     + ++     RID+  ++ E   L++ A+
Sbjct: 550 QAKMHLHKLHLIDAWRYMNPKLRDYTYHSKPFNCYN-----RIDYTFINQEWLHLINKAK 604

Query: 241 IDTKPRGWTKPSDHTPVIVSLDIPEPRKKQ 270
           I     G    SDH PVI    IP   K +
Sbjct: 605 I-----GTPLFSDHAPVITEFTIPNSTKPE 629


>gi|298387677|ref|ZP_06997228.1| transmembrane endonuclease/exonuclease/phosphatase [Bacteroides sp.
           1_1_14]
 gi|298259533|gb|EFI02406.1| transmembrane endonuclease/exonuclease/phosphatase [Bacteroides sp.
           1_1_14]
          Length = 372

 Score = 60.2 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 49/273 (17%), Positives = 82/273 (30%), Gaps = 33/273 (12%)

Query: 2   SVVTVATWNVNSIR------ARIHNLAAWIKENNPDIICLQETKTEDK---NFPFETLQS 52
           S +T+AT+NVNS        +    +AA++KE   DI C QE     +   +     L  
Sbjct: 114 SALTIATYNVNSFNHEHTGFSC-KQIAAYMKELGVDIFCFQEFGINHEFGIDSLRTVLSE 172

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
             Y+         +    LS +    I         +     +     IN QT+R+ N +
Sbjct: 173 WPYYYVPSSPAGESL-LQLSVFSRYPIKEKQLVTYPNSNNCSLWCDIDINDQTIRLFNNH 231

Query: 113 LPHGNPITSTKY------DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
           L       + +        D     +R     +  L        A   +I         P
Sbjct: 232 LQTTEVSRNKRKLEKELRADDTDRAERAALTLADGLHENFKKRAAQAEHINQLISASPYP 291

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226
            +   D                          H   + + ++            +RID+I
Sbjct: 292 TLVCGDFNSLPSSYVYQTVKGEKLNDGFQTCGHGYMYTFRYF---------KHLLRIDYI 342

Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
           + S E         +D         SDH PV++
Sbjct: 343 LHSSEFQ------GVDYFSPDLEY-SDHNPVVM 368


>gi|328785734|ref|XP_395633.4| PREDICTED: putative neutral sphingomyelinase-like [Apis mellifera]
          Length = 393

 Score = 60.2 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 46/277 (16%), Positives = 86/277 (31%), Gaps = 24/277 (8%)

Query: 3   VVTVATWNVNSI------R-ARIHNLAAWIKENNPDIICLQETKTEDK--NFPFETLQSL 53
           ++ + T N   I      R AR+  +A      N DIICLQE  + +       +T + L
Sbjct: 6   LINILTLNCWGIPYVSPNRSARMTAIADKFATENYDIICLQEIWSINDFKMIKAKTQEQL 65

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT---QTLRIGN 110
            Y          +G+ ILSK+   +++ H    +  V        F         L+I N
Sbjct: 66  PYSHYFYSGVIGSGLCILSKFPIKDVIFHKWPLNGYVHKIHHGDWFGGKGVGLCKLQIHN 125

Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170
             +         +Y+             +        +   G  + I        P    
Sbjct: 126 WNVNVYIAHLHAEYNRHNDEYIAHRVLQAFDTAQFIRMTSGGADSTILGGDLNTEPQDLV 185

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM--L 228
                 +          +        A +     Y+    +A+++    G RIDHI+   
Sbjct: 186 YRIICGVAGLTDACSNSSSNLGTNECANN----SYTN-TKHANTFPD--GKRIDHILYQG 238

Query: 229 SPEATSLLHSARI---DTKPRGWTKPSDHTPVIVSLD 262
           +      + + +    +  P      SDH  ++ +  
Sbjct: 239 TKNVKIEIINFQHPFPNRIPYKNFSYSDHEAIMATFK 275


>gi|302037090|ref|YP_003797412.1| hypothetical protein NIDE1755 [Candidatus Nitrospira defluvii]
 gi|300605154|emb|CBK41487.1| conserved protein of unknown function, putative
           Exodeoxyribonuclease [Candidatus Nitrospira defluvii]
          Length = 258

 Score = 60.2 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/261 (13%), Positives = 72/261 (27%), Gaps = 32/261 (12%)

Query: 3   VVTVATWNVNS-IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++ + +WN N  +R ++  L       N DI  +QE +  + +            +    
Sbjct: 25  LMRIVSWNCNGALRKKLPQLL----TLNADIYIVQECEKPEGSIDSSYKSWAKGSLWVGS 80

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
            K        S      +     G +  V          +   T               S
Sbjct: 81  NKHRGLGVFSSNAPLAMLDWDGNGLESFVPFTIDNKITALAVWT-----------RHANS 129

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
             +               +       ++  GD+N   +  D ++     +D    L    
Sbjct: 130 PTFRYIGQLW--KYLQVHKTRIENRNMLICGDFNSNAR-WDVWDRWWNHSDVVRELSSIG 186

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
                 +       + +       +F+ +   +   +    ID+   S +    L S+ I
Sbjct: 187 LESVYHHRTGEQQGKESQP-----TFFMHRKLARPYH----IDYAFASKDL---LQSSEI 234

Query: 242 DTK-PRGWTKPSDHTPVIVSL 261
                  W   SDH P++  +
Sbjct: 235 SVGRADDWLIFSDHMPIVFDI 255


>gi|71282220|ref|YP_271635.1| endonuclease/exonuclease/phosphatase family protein [Colwellia
           psychrerythraea 34H]
 gi|71147960|gb|AAZ28433.1| endonuclease/exonuclease/phosphatase family family [Colwellia
           psychrerythraea 34H]
          Length = 334

 Score = 60.2 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 48/261 (18%), Positives = 81/261 (31%), Gaps = 40/261 (15%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQE-TKTEDKNFPFETLQSLNYHIETC 60
           S + V T+N+         L   +K   PDI+ LQE  K        E L    Y+ E  
Sbjct: 106 SQIKVITFNIGG--GSKDELQLLVKYMKPDILLLQEALKVN-----LEVLFDQRYYSE-- 156

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
                +G+ ILSK+   +                           L + N++L     + 
Sbjct: 157 ---CISGLCILSKFPFQQTNRLNRKMFGGWGTFATFYNVITPYGELSLANIHLETPRSVL 213

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
                            +++ LE+    ++A +              I   D     +  
Sbjct: 214 MGAIYRHPDQQLAESTESNRELEVNLLNLWATNR----------PYTIIAGDFNMPADEN 263

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
              Q    +     ++        Y+ W           G RIDHI+ S +    L S  
Sbjct: 264 LYQQNFSLLNNVIEVKGFAFNRTKYTSW----------HGARIDHILYSDDI--SLSSVE 311

Query: 241 IDTKPRGWTKPSDHTPVIVSL 261
           +  + +G     DH PV+ +L
Sbjct: 312 VVERVKG-----DHRPVMATL 327


>gi|256822581|ref|YP_003146544.1| endonuclease/exonuclease/phosphatase [Kangiella koreensis DSM
           16069]
 gi|256796120|gb|ACV26776.1| Endonuclease/exonuclease/phosphatase [Kangiella koreensis DSM
           16069]
          Length = 248

 Score = 60.2 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 36/270 (13%), Positives = 76/270 (28%), Gaps = 34/270 (12%)

Query: 4   VTVATWNVN---SI--RARIHNLAAWIKENNPDIICLQET-----KTEDKNFPFETLQSL 53
           + V T+N++    +  R R   +   ++  + DII LQE      ++ + N   E  ++L
Sbjct: 3   LKVITYNIHRAIGVDRRFRPERIVEILESYDADIIALQEVDDGVPRSRELNLAKELAEAL 62

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
           +             V++   +     ++  P          I+       Q   I     
Sbjct: 63  D----FPYYVLGKNVSLKKGHYGNATLSRYPIVRERNIDLTIDNKKRRGCQHTTI----- 113

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
              +  +S   +  +      L  +++  + +   +                 I   ND 
Sbjct: 114 ---DIPSSPSKEVHLEVFNLHLGLSAKERDKQIQKLLHSSEYNKLNEDSNKLIIGDFNDW 170

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
              L    + +           +        Y  +              +D I    +  
Sbjct: 171 RSLLRKPLTEEAGFLCATDRRYKNKVSALKTYPSFSPRGG---------LDRIFYQGDL- 220

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             L +  +  K       SDH PVI    +
Sbjct: 221 -KLKNVFLCRKKLSKV-ASDHKPVIAEFKL 248


>gi|147823103|emb|CAN66330.1| hypothetical protein VITISV_000598 [Vitis vinifera]
          Length = 2691

 Score = 60.2 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 22/38 (57%), Gaps = 2/38 (5%)

Query: 4    VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETK 39
            + + +WN+  + +R     +  +++  NPD++  QETK
Sbjct: 1545 MKIISWNIRGLGSRTKRRVVKDFLRLQNPDVVMFQETK 1582


>gi|226372636|gb|ACO51943.1| LINE-1 reverse transcriptase homolog [Rana catesbeiana]
          Length = 237

 Score = 60.2 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/250 (14%), Positives = 84/250 (33%), Gaps = 27/250 (10%)

Query: 1   MSVVTVATWNV---NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN-YH 56
           M+ + V + NV   NSI  R   L  + K +  ++I +QET            +    + 
Sbjct: 1   MA-LKVYSCNVKGLNSIGKRWQALKEF-KSSKAEVIMVQETH----------FKPSGSFK 48

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
             +         +  S    + I+            + + +    + + + +   +L   
Sbjct: 49  FASRHFPIAYTASDPSGKVGVAILIKRTS-----PIKILSSYLDPHGRFIFLKCSHLSTS 103

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
             + +    +          F   +   +  +I  GD+N+   P      +        +
Sbjct: 104 FSLINIYAPNVGQIGFLEKVFEKLQPFSQSFMIMGGDFNVCMSPTRDRKTLFQTTSQSSS 163

Query: 177 LE-VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            +      + +++    D+ R  H T   Y+F+ +   S+S     R+D+ +++      
Sbjct: 164 KKLSTSFRKLVRSHNLFDSWRIKHPTQKHYTFYSHPHKSYS-----RLDYFLITGPLLPY 218

Query: 236 LHSARIDTKP 245
           + S+ I    
Sbjct: 219 VVSSEIIHFI 228


>gi|160885625|ref|ZP_02066628.1| hypothetical protein BACOVA_03628 [Bacteroides ovatus ATCC 8483]
 gi|156109247|gb|EDO10992.1| hypothetical protein BACOVA_03628 [Bacteroides ovatus ATCC 8483]
          Length = 316

 Score = 60.2 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 45/302 (14%), Positives = 87/302 (28%), Gaps = 45/302 (14%)

Query: 2   SVVTVATWNV-----------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETL 50
           + +TVA++N+           N    R   +A  ++ ++ DI   QE          E L
Sbjct: 26  TSITVASYNLRNANGGDSINGNGWGQRYPVIAQIVQYHDFDIFGTQECFIHQLKDMKEAL 85

Query: 51  QSLNY-HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
              +Y  +     K     + +        V       L          +      +   
Sbjct: 86  PGYDYIGVGRDDGKEKGEHSAIFYRTDKFDVIEKGDFWLSETPDVPSKGWDAVLPRICSW 145

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
             +           ++  +  I +  R  S  L  ++         +             
Sbjct: 146 GHFKCKDTGFEFLFFNLHMDHIGKKARVESAFLVQDKMKELGKGKELP----AILTGDFN 201

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
            +    + +   S   L +       R   +     +F ++  +S+++    RIDHI +S
Sbjct: 202 VDQTHQSYDAFVSKGVLCDSYEKAGFRYAING----TFNNFDPNSFTE---SRIDHIFVS 254

Query: 230 PEA--------------------TSLLHSA--RIDTKPRGWTKPSDHTPVIVSLDIPEPR 267
           P                          +     ID K      PSDH PV V L+  + +
Sbjct: 255 PSFQVKRYGVLTDTYRSIVGKGEKKQANDCPEEIDIKTYQARTPSDHFPVKVELEFDQRQ 314

Query: 268 KK 269
           +K
Sbjct: 315 QK 316


>gi|53712613|ref|YP_098605.1| hypothetical protein BF1322 [Bacteroides fragilis YCH46]
 gi|52215478|dbj|BAD48071.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
          Length = 285

 Score = 60.2 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 39/275 (14%), Positives = 80/275 (29%), Gaps = 33/275 (12%)

Query: 4   VTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL- 53
           V VAT+N+         NS + R   +  +I+E +PD++ +QE    +     + L  L 
Sbjct: 27  VRVATFNIRYDNLGDSLNSWKYRKEKVCEFIREKHPDVLGMQEV--LNHQL-KDLLSGLP 83

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTH----LPGDDLDVQARFIEATFTINTQTLRIG 109
           +Y     G++        +     +              +      +  +      +   
Sbjct: 84  DYAYVGVGREDGKTQGEYAPVFYRKDKYDLLDSNTFWLSEHPDSIGKLGWDAACTRVATW 143

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
                          +     +    R  S  L +++    AG +  +       +    
Sbjct: 144 AKLKDKTTGKEFLMLNTHFDHVGTEARRNSALLIIDKIKEIAGTHPAMMTGDFNVSEEWE 203

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDY-YADSWSKNKGIRIDHIML 228
                 + E                      +   Y+F D+       + K   ID I +
Sbjct: 204 AYKTITSNEFVLKDAWKIAGK---------QSGENYTFHDFGRVPVAEREK---IDFIFV 251

Query: 229 SPEATSLLHSARID-TKPRGWTKPSDHTPVIVSLD 262
           +P+    +  A I  +     T  SDH   +  L+
Sbjct: 252 TPQI--KVADAEIISSAITDSTYLSDHNAHLADLE 284


>gi|224537589|ref|ZP_03678128.1| hypothetical protein BACCELL_02469 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224520786|gb|EEF89891.1| hypothetical protein BACCELL_02469 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 370

 Score = 60.2 bits (144), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/282 (12%), Positives = 73/282 (25%), Gaps = 37/282 (13%)

Query: 2   SVVTVATWNVNSIRARIHN-----LAAWIKENNPDIICLQETKTEDK-----NFPFE-TL 50
           +   V ++N+      +       +  ++K +  DI+CLQE +T +          E  L
Sbjct: 102 NSFKVLSYNIMGFDGAVKKDGENLILNYLKNSGADILCLQEYQTIESPRYLSQKDVEKAL 161

Query: 51  QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
           +   YH         N   +                   + +       +    ++    
Sbjct: 162 KDYPYH---------NIQIVGRGSGKGHTNRIACYSKFPILSSRTLDYASEYNGSVVYEL 212

Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDY-------NIIPQPHDC 163
                   + +   +      +  + + S     E   + +G                  
Sbjct: 213 KMGEDTVMLINNHLESNKLTKEDKVVYESMLKSPETEKVKSGARLLIRKLAEASAIRAPQ 272

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG--- 220
            + I  E  A     +                      +  ++         S N+    
Sbjct: 273 ADSIAQEIAASRYPYIIVCGDFNDTPISYAHRVIEKGLNDAFT-KSGRGLGISYNQNKFY 331

Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
            RID+I+ S        +  +D       K SDH P+   L 
Sbjct: 332 FRIDNILASKNLKPY--NCTVDRSI----KESDHYPIWCYLK 367


>gi|209551444|ref|YP_002283361.1| endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209537200|gb|ACI57135.1| Endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 288

 Score = 60.2 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 47/302 (15%), Positives = 95/302 (31%), Gaps = 58/302 (19%)

Query: 4   VTVATWNVN---SIRARIHNLAAWIKE--NNPDIICLQETKTEDKNFPFETLQSL----- 53
           +  A++N+     +  R     A I       D+I LQE     + F       +     
Sbjct: 1   MNFASYNIQYGFGLDGRYD--LARIARSLEGADVIALQEV---TRGFSRNGFADMTADLA 55

Query: 54  ----NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
               +Y          +  A     QP+       G+ +  +   +     +  ++  IG
Sbjct: 56  ACFPDYFWVYGPACDIHVEAGEGGRQPVRGTRFQFGNMVLSRWPILSTRTLLLPRSRTIG 115

Query: 110 NLYLPHGN-----------------PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG 152
            + L  G                   +     D++I  ++      +  ++    L  AG
Sbjct: 116 KINLQRGATEAVIAVPGGAIRVYSVHLDHVSPDERIRQLQFLNAHINAFVQEGGSLTGAG 175

Query: 153 DYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT----------H 202
           ++++   P      I+ + +         +        +    R                
Sbjct: 176 EFDLPEPPLPEDYVILGDFNMEPESPEYCALAGAGGGYYGRVARIGTPVDAFAALEAYGP 235

Query: 203 HLYSFWDYYADSWSKNKGIR--IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
             YS+ +       ++ G R  +D+  +S    S L +ARIDT+  G    SDH P+ V 
Sbjct: 236 GSYSWMN------PEDHGERMHLDYCFVSCGLVSRLQAARIDTQSVG----SDHFPLWVE 285

Query: 261 LD 262
           ++
Sbjct: 286 IE 287


>gi|262382529|ref|ZP_06075666.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|262295407|gb|EEY83338.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
          Length = 365

 Score = 60.2 bits (144), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 41/284 (14%), Positives = 78/284 (27%), Gaps = 43/284 (15%)

Query: 3   VVTVATWNV------NSIRARIHNLAAWIKENNPDIICLQET------KTEDKNFPFETL 50
           V+ V T+NV      N  +   + +  +I  ++ DI+CLQE       K+   +  ++ L
Sbjct: 101 VLKVLTYNVMAFGYKNHTKIAPNKIIQYIANSDADIVCLQEYATAKSEKSLTASKIYDAL 160

Query: 51  QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
               Y        +      ++ +    +                     I  + L + N
Sbjct: 161 SMYPYRSVFYQSSTKFQSFGIAVFSKYPLSNSRMVKYDSDYNGSSVHEVNIKGKKLTLIN 220

Query: 111 LYLPHGNPITSTKYDDK-----------ISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159
            +L         +                     F +       +      A    I   
Sbjct: 221 NHLESFKLTMEDRTRYSSLIKSFSSDGLDDLKGAFEQKLGPAFRIRAKQAEAVSEEIKNA 280

Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK 219
             +        ND   +   R     L +             +  + ++           
Sbjct: 281 KGEYVLVCGDFNDTPISYAHRTIQGDLTDAFAESGRGMGITYNQNFFWF----------- 329

Query: 220 GIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             RID+I+ SP  TS   +  +D         SDH P+   L +
Sbjct: 330 --RIDNILHSPNMTS--MNCSVDKVAY-----SDHYPLWCCLKL 364


>gi|301162321|emb|CBW21866.1| putative endonuclease/exonuclease/phosphatase family protein
           [Bacteroides fragilis 638R]
          Length = 285

 Score = 59.8 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 39/275 (14%), Positives = 80/275 (29%), Gaps = 33/275 (12%)

Query: 4   VTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL- 53
           V VAT+N+         NS + R   +  +I+E +PD++ +QE    +     + L  L 
Sbjct: 27  VRVATFNIRYDNPGDSLNSWKYRKEKVCEFIREKHPDVLGMQEV--LNHQL-KDLLSGLP 83

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTH----LPGDDLDVQARFIEATFTINTQTLRIG 109
           +Y     G++        +     +              +      +  +      +   
Sbjct: 84  DYAYVGVGREDGKTQGEYAPVFYRKDKYDLLDSNTFWLSEHPDSIGKLGWDAACTRVATW 143

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
                          +     +    R  S  L +++    AG +  +       +    
Sbjct: 144 AKLKDKTTGKEFLMLNTHFDHVGTEARRNSALLIIDKIKEIAGTHPAMMTGDFNVSEEWE 203

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDY-YADSWSKNKGIRIDHIML 228
                 + E                      +   Y+F D+       + K   ID I +
Sbjct: 204 AYKTITSNEFVLKDAWKIAGK---------QSGENYTFHDFGRVPVAEREK---IDFIFV 251

Query: 229 SPEATSLLHSARID-TKPRGWTKPSDHTPVIVSLD 262
           +P+    +  A I  +     T  SDH   +  L+
Sbjct: 252 TPQI--KVADAEIISSAITDSTYLSDHNAHLADLE 284


>gi|13473422|ref|NP_104989.1| hypothetical protein mlr4014 [Mesorhizobium loti MAFF303099]
 gi|14024171|dbj|BAB50775.1| mlr4014 [Mesorhizobium loti MAFF303099]
          Length = 289

 Score = 59.8 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/295 (11%), Positives = 76/295 (25%), Gaps = 44/295 (14%)

Query: 4   VTVATWNVN-SIRARIHNLAAWIKENNP----DIICLQE-TKTEDK----NFPFETLQSL 53
           + + T+N+   I   +       +  +     D++ LQE T+   +    +   E  ++L
Sbjct: 1   MKLVTYNIQYGIG--LDGQYDVARIADAVRGADVVALQEVTRNNPRNGGRDMVAEIGEAL 58

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
             +    G      +    +       T   G+ +  +     +   +  ++     +  
Sbjct: 59  PDYFAVYGSNFEANIGSRIENGRAITTTFQLGNMMLSKTPIHLSRNLLLPRSRSFEMMNF 118

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDY------------------- 154
             G      +                  +E    + F                       
Sbjct: 119 QRGALEALIETPLGFIRFYSIHLDHRSPVERASQIQFLRRRLLNYALEGGALSGVAEIGL 178

Query: 155 -NIIPQPHDCYNPIIWENDACF-------TLEVRQSFQKLQNMGFTDAIRATHDTHHLYS 206
             +                            + +       +     A+R       L S
Sbjct: 179 PELPHPEAFVAMGDFNMLAGSPEYVELAGRPDHQFGMPLTADFAVDAAVRLNVTGDDLAS 238

Query: 207 FWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           + D    + + ++  RID++  S      L    +D +  G    SDH PV   L
Sbjct: 239 WVDPKDPA-NTSRHKRIDYVFTSASPARSLQHLWVDHQATG----SDHLPVWAEL 288


>gi|327281562|ref|XP_003225516.1| PREDICTED: hypothetical protein LOC100561123 [Anolis carolinensis]
          Length = 2290

 Score = 59.8 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 16/91 (17%)

Query: 188 NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRG 247
                DA R  +     Y+F+     +W+     RID I LS    +     +I  +PR 
Sbjct: 42  EFDLHDAWRYHNQNKRDYTFYSDRHKTWA-----RIDMIWLSNSLCTRTEEIKI--QPRD 94

Query: 248 WTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278
               SDH P+ +S++      K+++S    M
Sbjct: 95  K---SDHCPITISIN------KRRNSYKWRM 116


>gi|260466724|ref|ZP_05812910.1| Endonuclease/exonuclease/phosphatase [Mesorhizobium opportunistum
           WSM2075]
 gi|259029454|gb|EEW30744.1| Endonuclease/exonuclease/phosphatase [Mesorhizobium opportunistum
           WSM2075]
          Length = 287

 Score = 59.8 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 37/295 (12%), Positives = 70/295 (23%), Gaps = 46/295 (15%)

Query: 4   VTVATWNVN---SIRARIHNLAAW--IKEN--NPDIICLQE-TKTEDK----NFPFETLQ 51
           + + T+N+     +            I E     D+I LQE T+   +    +   E  +
Sbjct: 1   MKLVTYNIQYGVGL----DGQYDVGRIAETVRGADVIALQEVTRNNPRNGGRDMVAEIGE 56

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
           +L  +    G      +    +       T   G+ +  +     +   +  ++     +
Sbjct: 57  ALPDYFAVYGSNFEANIGSRIEDGRAITTTFQLGNMVLSKTPIHLSRNLLLPRSRSFEMM 116

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDY----------------- 154
               G      +                  +E    + F                     
Sbjct: 117 NFQRGALEALIETPLGFIRFYSIHLDHRSPVERASQIQFLRQRLLNYALEGGALSGVAEI 176

Query: 155 ---NIIPQPHDCYNPIIWE-----NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYS 206
               +                               F       F        D   L +
Sbjct: 177 GLPELPHPEAFVGMGDFNMLAGSPEYVELAGRPDHEFGMPLTADFAVDAAVRLDVADLAT 236

Query: 207 FWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           + D        ++  RID+I  S      L    +D +  G    SDH PV   L
Sbjct: 237 WVDPK-RPEDASRHKRIDYIFTSASLARSLKRLWVDRQAVG----SDHLPVWAEL 286


>gi|110803483|ref|YP_698449.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens SM101]
 gi|110683984|gb|ABG87354.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens SM101]
          Length = 262

 Score = 59.8 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 48/276 (17%), Positives = 81/276 (29%), Gaps = 28/276 (10%)

Query: 1   MSVVTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51
           M  + V T+N+         N    R   +   IK++ PDII +QE      +   + L 
Sbjct: 1   MRNLKVMTFNLKYDFKAQDNNEWSQRCLRITKLIKDHLPDIIGIQEGLIHMLDDMDDLLD 60

Query: 52  SLNY---HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108
             ++     E  G+  +N +  L     +                  +   ++     ++
Sbjct: 61  EYSWVGEDGEGNGKDEFNAIFFLKNKFEVLEWNQFWLSKTPNIKGSKDFNSSLPRICTKL 120

Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL-EEPLIFAGDYNIIPQPHDCYNPI 167
                  G  I                      L+  ++         II    +CY   
Sbjct: 121 KLKDKISGLKIDIYNTHLDHESELAREEGIKIILKEVKKNYEIYKTPYIIMGDFNCYLED 180

Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227
              N           F    +    + +   H     Y              G  ID+I+
Sbjct: 181 NLFNIIREEETNNTCFNVCYDNIKNNILGTFHYFKGGY-------------DGRIIDYIL 227

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            S E    + S  ID +   W  PSDH PVI  L++
Sbjct: 228 YSKECE--IKSLNIDDRKINWGYPSDHYPVICELEL 261


>gi|311259807|ref|XP_001928433.2| PREDICTED: tyrosyl-DNA phosphodiesterase 2-like [Sus scrofa]
          Length = 362

 Score = 59.8 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 45/285 (15%), Positives = 82/285 (28%), Gaps = 59/285 (20%)

Query: 2   SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           SV +  TWN++ +       RAR   + +++   +PD+I LQE        P        
Sbjct: 112 SVFSFITWNIDGLDLNSLLERAR--GVCSYLALYSPDVIFLQEV------IPP------- 156

Query: 55  YHIETCGQKSYNGVAIL-SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
           Y+     + S   +     +     I+          Q         +    L +     
Sbjct: 157 YYTYLKKKASSYEIITGNEEGYFTAIMLKKSRVKFKSQEIIPFPNTKMMRNLLCVHVSVS 216

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
            +   + ++  +      +  +      L+               Q       +I+  D 
Sbjct: 217 GNELCLMTSHLESTRGHAEERMNQLKMVLK-------------KMQEAPESATVIFAGDT 263

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG------IRIDHIM 227
               +       L N             H  Y+ WD   +S   N G      +R D I 
Sbjct: 264 NLRDQEVTKCGGLPNNILDVWEFLGKPKHCQYT-WDTQMNS---NLGIAATCKLRFDRIF 319

Query: 228 LSPEATSLLHSARIDT---KPRGWTK------PSDHTPVIVSLDI 263
                 +    + I        G  K      PSDH  ++ +LD+
Sbjct: 320 ----FRAAAEGSHIIPRSLDLLGLEKLDCGRFPSDHWGLLCNLDV 360


>gi|319954572|ref|YP_004165839.1| endonuclease/exonuclease/phosphatase [Cellulophaga algicola DSM
           14237]
 gi|319423232|gb|ADV50341.1| Endonuclease/exonuclease/phosphatase [Cellulophaga algicola DSM
           14237]
          Length = 279

 Score = 59.8 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 35/276 (12%), Positives = 75/276 (27%), Gaps = 42/276 (15%)

Query: 6   VATWNV------NSIRA---RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56
           + ++N+      +   A   R   +   +K  +PDI  +QE   +   +    L+   + 
Sbjct: 25  IMSYNIRLDVASDGENAWPLRKDFVIDQLKFYSPDIFGIQEGTPQQTAYLAAQLKDYKFI 84

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                       + +        V       L      +   +      +    L+    
Sbjct: 85  GVGRDGGDKGEYSAIFYNSSQFTVAEENTFWLSETPTEVSMGWDAACNRVCTYGLFTNKD 144

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLE---------LEEPLIFAGDYNIIPQPHDCYNPI 167
                  ++  +       R    +L           + P++  GD+N+ P         
Sbjct: 145 TKEKFWVFNTHLDHKGARARAQGVQLILNKIKEVNTKDYPVVLTGDFNLEPTDEVIATVK 204

Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227
               DA     +    +   N                                 RID+I 
Sbjct: 205 NVLIDAKEVAHLTFGPEGTFNAFKFTTAVK-----------------------RRIDYIF 241

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           ++P   + +    + +  +    PSDH PV +  +I
Sbjct: 242 IAPNQVN-VTKYAVLSDSKDLKYPSDHLPVYIEFEI 276


>gi|71278943|ref|YP_268710.1| endonuclease/exonuclease/phosphatase family protein [Colwellia
           psychrerythraea 34H]
 gi|71144683|gb|AAZ25156.1| endonuclease/exonuclease/phosphatase family protein [Colwellia
           psychrerythraea 34H]
          Length = 301

 Score = 59.8 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 50/285 (17%), Positives = 84/285 (29%), Gaps = 34/285 (11%)

Query: 4   VTVATWNVNSIRARI-------------HNLAAWIKENNPDIICLQETKTEDKNFPFETL 50
           + VA+WN+    A +               LA + K+ N D+I LQE   E + +  +  
Sbjct: 26  IKVASWNI----AWLGSHEYNHRTDADYKKLAKYAKQLNADVIALQEV--ESEYWARKVF 79

Query: 51  -QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
               +Y+  T       GVAI                D+      ++ T T N +TL + 
Sbjct: 80  GNDYDYYFSTKDWVQRVGVAIKKSQHFTVEAKEYKALDVGKVRHGMDITLTKNGKTLHLL 139

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
            ++L  G            S          +    E     +   + + Q  D +     
Sbjct: 140 AVHLKSGCFAAPLD---SSSVKAMPSTSIKEEKRKEACTKLSKQISPLEQWIDLHASQDA 196

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYY----ADSWSKNKGIRIDH 225
                     R S            +    +     + W       +  W       IDH
Sbjct: 197 AYIVLGDFNRRFSQDIALKYSEDKGLWQALNDDGKETLWTPTMTANSGCWGGYYKEYIDH 256

Query: 226 IMLSPEATSLLHSAR----IDTKPRGWT---KPSDHTPVIVSLDI 263
           I+ SP+A      +     I             SDH P+ V + +
Sbjct: 257 IIFSPKAKEKYIESSFEQLIFKPKYTKELSRNLSDHCPISVKVKL 301


>gi|147785638|emb|CAN77641.1| hypothetical protein VITISV_007623 [Vitis vinifera]
          Length = 1284

 Score = 59.8 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 40/263 (15%), Positives = 78/263 (29%), Gaps = 39/263 (14%)

Query: 4   VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + +WNV  + +R     +  +++  NPD++ +QETK   +N     + S         
Sbjct: 63  MKIISWNVRGLGSRNKRRMVKDFLRSENPDVVMIQETK--KENCDRRFVGS------VWT 114

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
            ++ + VA+        I+      +L  +   I +       +L              +
Sbjct: 115 VRNKDWVALPXSGASGGILIIWDSKNLRREEVVIGSFSVSVKFSLDGCGPLWISAVYGPN 174

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
           +    K  W++ F  +            F        +           +   F  E   
Sbjct: 175 SPSLRKDFWVELFDIYGLTYPLWCVGGDFNVIRRSSEKMGGSSLTPSMRDFDSFIRECEL 234

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT----SLLH 237
               L+N  FT +                           R+D  + S E        L 
Sbjct: 235 LDPPLRNASFTXSNMQESPVCX------------------RLDRFLYSNEWGLLFPQGLQ 276

Query: 238 SARIDTKPRGWTKPSDHTPVIVS 260
            A I        + SDH P+++ 
Sbjct: 277 EALI-------RRTSDHWPIVMD 292


>gi|83409938|emb|CAI64359.1| conserved hypothetical protein [uncultured archaeon]
          Length = 347

 Score = 59.8 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 41/337 (12%), Positives = 72/337 (21%), Gaps = 82/337 (24%)

Query: 1   MSV-VTVATWNVNSIRARIHNLAA-----------------WIKENNPDIICLQETKTED 42
           MS  + +AT+N       + NL                    +   N DI+CLQE   ++
Sbjct: 20  MSTKLRIATFN-------LENLDDKPRQTPTLDERIAVMRPQLVRLNADILCLQEVNGQE 72

Query: 43  K------NFPFETL----QSLNYHIETCG-------QKSYNGVAILSKYQPIEIVTHLPG 85
           K          E L      + YH  +             N V +               
Sbjct: 73  KTGQPRRLLALEKLVEGTPYVEYHTVSTMTADGTQVYDERNLVILSRYEIVEHHQYKHDH 132

Query: 86  DDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELE 145
                  +          + ++           I   +                  +E +
Sbjct: 133 APAPWYQKVTAEPQEEEAKEVK--WERPIQHAKIKLDQNRFFQVINLHLKSRLPSNIEGQ 190

Query: 146 EPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY 205
           +   F              + +     A  T  +                   +      
Sbjct: 191 KLNTFTWKTACGWAEGFFVSSMKRVGQALETRMLIDKLFDEDEDALIVVCGDFNAESDEV 250

Query: 206 SFWDYYADSWSKNKG---IR-------------------------IDHIMLSPEATSLLH 237
                  D  +   G    R                         IDH+++S        
Sbjct: 251 PVEAIRGDVENTGNGKLARRALVPCERTIPESSRFSMLYIGQGRMIDHLLVSRSLLPYYT 310

Query: 238 SARIDTKPRGWTKP----------SDHTPVIVSLDIP 264
            + I  +                 SDH PVI   ++P
Sbjct: 311 GSEIHNELLHDESIAFATDKKYPESDHAPVIAKFELP 347


>gi|31652284|emb|CAD92510.1| TRAF and TNF receptor-associated protein (TTRAP)(EAP2, AD022,
           MGC9099) [Homo sapiens]
 gi|119575863|gb|EAW55459.1| TRAF and TNF receptor associated protein, isoform CRA_b [Homo
           sapiens]
          Length = 304

 Score = 59.8 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 46/285 (16%), Positives = 82/285 (28%), Gaps = 59/285 (20%)

Query: 2   SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           S+ ++ TWN++ +       RAR   + +++   +PD+I LQE        P        
Sbjct: 54  SMFSLITWNIDGLDLNNLSERAR--GVCSYLALYSPDVIFLQEV------IPP------- 98

Query: 55  YHIETCGQKSYNGVAI-LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
           Y+     + S   +     +     I+       L  Q      +  +    L +     
Sbjct: 99  YYSYLKKRSSNYEIITGHEEGYFTAIMLKKSRVKLKSQEIIPFPSTKMMRNLLCVHVNVS 158

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
            +   + ++  +         +      L+               Q       +I+  D 
Sbjct: 159 GNELCLMTSHLESTRGHAAERMNQLKMVLK-------------KMQEAPESATVIFAGDT 205

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG------IRIDHIM 227
                       L N             H  Y+ WD   +S   N G      +R D I 
Sbjct: 206 NLRDREVTRCGGLPNNIVDVWEFLGKPKHCQYT-WDTQMNS---NLGITAACKLRFDRIF 261

Query: 228 LSPEATSLLHSARIDT---KPRGWTK------PSDHTPVIVSLDI 263
                 +      I        G  K      PSDH  ++ +LDI
Sbjct: 262 ----FRAAAEEGHIIPRSLDLLGLEKLDCGRFPSDHWGLLCNLDI 302


>gi|147801861|emb|CAN65957.1| hypothetical protein VITISV_035610 [Vitis vinifera]
          Length = 1532

 Score = 59.8 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 28/261 (10%), Positives = 69/261 (26%), Gaps = 37/261 (14%)

Query: 5   TVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
            + +WN   + +R     +  +++   PDI+ +QETK                       
Sbjct: 508 KIISWNTRGLGSRKKRRVVKDFLRSEKPDIVMIQETK-------------------KAEC 548

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT---FTINTQTLRIGNLYLPHGNPI 119
                 ++ +      +V    G    +   +         +   +  +   +   G+  
Sbjct: 549 DRRFVGSVWTARNKEWVVLPACGASGGILVIWDSKKLLSEEVVLGSFSVSVKFAMDGSEQ 608

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                    +       F  +  ++                    +          T  +
Sbjct: 609 FWLSAVYGPNSTALRKDFWVELSDIFGLSSPCWCVGGDFNVIRRCSEK--LGGGRLTPSM 666

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           +     ++     D           +++ +       K    R+D  + S E   L   +
Sbjct: 667 KDLDDFIRENELIDPPL----RSASFTWSNMQEHPVCK----RLDRFLYSNEWEQLFPQS 718

Query: 240 RIDTKPRGWTKPSDHTPVIVS 260
             +  PR     SDH P+++ 
Sbjct: 719 LQEVLPR---WTSDHWPIVLE 736


>gi|301060197|ref|ZP_07201064.1| endonuclease/exonuclease/phosphatase family protein [delta
           proteobacterium NaphS2]
 gi|300445709|gb|EFK09607.1| endonuclease/exonuclease/phosphatase family protein [delta
           proteobacterium NaphS2]
          Length = 250

 Score = 59.8 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 74/259 (28%), Gaps = 12/259 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + TWN       +   A  +   N DI+ +QE   E+   P E+              
Sbjct: 1   MKIITWNCAG---ALRKKAKELDVLNADILVIQE--CEN---PSESTIEYQKWAGDFLWI 52

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
             N    L  +   E          + +   ++   +    T     L+LP     T T 
Sbjct: 53  GKNKNKGLGIFPKKENKIKQLDWHGEFEINGLKTKSSSTHWTTEELELFLPFSINSTYTA 112

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH-DCYNPIIWENDACFTLEVRQS 182
                            +      +              D  +  IW+    +       
Sbjct: 113 LGVWTKGSDDQAFSYIGQFWKYLQIHARDLSYPNTIIIGDFNSNTIWDKKDRWWSHSDIM 172

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
            +  +    +     T+++    +   ++    + NK   ID+ +LS           I 
Sbjct: 173 QELREIKIESAYHYQTNESQGRETTPTFFHR-KNLNKAYHIDYALLSSNILPQSK--VII 229

Query: 243 TKPRGWTKPSDHTPVIVSL 261
            K   W K SDH P+ V +
Sbjct: 230 GKADDWLKISDHVPLSVEI 248


>gi|225464836|ref|XP_002272323.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 1140

 Score = 59.8 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/259 (11%), Positives = 69/259 (26%), Gaps = 32/259 (12%)

Query: 4   VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + +WNV      ++   + A I+    D++CLQETK +        ++SL     +  
Sbjct: 5   LRILSWNVRGANDSSKRRIIKAVIRSQRVDLLCLQETKIQS--LSEGLVRSLGAGRWSKW 62

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
                  +             +           +E      + + R  N+        T 
Sbjct: 63  VALDAVGSAG----------GMLVCWDKRSLEVMETEVGKFSVSCRFRNVENGLTWFFTG 112

Query: 122 TKYDDKISWIKRFLRFASQRLE-LEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
                     +             E+     GD+N+I    +                  
Sbjct: 113 VYGPFSKGDRECLWEELGAIRGLWEDLWCLGGDFNVILSQRERNRQGRLTG--------- 163

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            + +          +         +++    +         R+D  +++ +   +     
Sbjct: 164 -AMRIFAQTVDELELMDLPMQGGAFTW----SGGRDNQSWARLDRFLVTQQWLEMFSGVA 218

Query: 241 IDTKPRGWTKPSDHTPVIV 259
                R      DH P+++
Sbjct: 219 QCRLQRPTF---DHFPILL 234


>gi|124009803|ref|ZP_01694472.1| endonuclease/exonuclease/phosphatase [Microscilla marina ATCC
           23134]
 gi|123984211|gb|EAY24567.1| endonuclease/exonuclease/phosphatase [Microscilla marina ATCC
           23134]
          Length = 356

 Score = 59.8 bits (143), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 45/313 (14%), Positives = 86/313 (27%), Gaps = 60/313 (19%)

Query: 4   VTVATWNV--------------------------NSIRARIHNLAAWIKENNPDIICLQE 37
           + V +WNV                          +SI   I  +A  I + +PDII LQE
Sbjct: 45  LKVLSWNVQYMAGKGYVFFYDLLDNSGPDTRPSKDSISLTIKEVARIITQEDPDIILLQE 104

Query: 38  T-----KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIE--IVTHLPGDDLDV 90
                 +T+ ++   + L  L      C   ++   A       +   +   L       
Sbjct: 105 IDEGAARTDKED-QLKRLLGLINKAYQCHCSAFYWKASFVPDPHVMGSVGMKLSTISKYK 163

Query: 91  QARFIEATFTINTQTLRIGNLYLPHGNPITSTKYD--------------------DKISW 130
            +  I     +  Q   +   YL      T    +                         
Sbjct: 164 ISEGIRHQLPLIPQNFLVQQFYLKRAVLETKMPVEGNKDLLVLNTHLSAFAQGTNTMEQQ 223

Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG 190
           +    +   +R +   P +  GD+N++P  +       ++           SF       
Sbjct: 224 VVHVNKMLKERTKQGHPWLLGGDFNLLPVGNAYRTLPKYQKKYYKPKTEIASFFNDYQAV 283

Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
                    +    ++ +         ++   ID+I  S      L    I    +    
Sbjct: 284 PNIEQTRGENRAEWFTHFPNDPRVKQPDRT--IDYIFFSKNID--LGKTGI--GQKDTWS 337

Query: 251 PSDHTPVIVSLDI 263
            SDH P++    +
Sbjct: 338 ISDHLPLMAEFSL 350


>gi|149280306|ref|ZP_01886428.1| endonuclease/exonuclease/phosphatase family protein [Pedobacter sp.
           BAL39]
 gi|149228995|gb|EDM34392.1| endonuclease/exonuclease/phosphatase family protein [Pedobacter sp.
           BAL39]
          Length = 370

 Score = 59.8 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 40/278 (14%), Positives = 76/278 (27%), Gaps = 29/278 (10%)

Query: 2   SVVTVATWNVNSIR--------ARIHNLAAWIKENNPDIICLQE--TKTEDKNFP----- 46
           SVV + T+NV+  +           H +   I++ NPDII  QE  T+     F      
Sbjct: 104 SVVRMMTYNVHGFKPHEGQEFERVKHQMLKLIEDQNPDIIGFQEYYTR-RRGTFDITDSL 162

Query: 47  FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA-TFTINTQT 105
              L++  Y+  +  +  Y    +    +   +   +     +            ++ + 
Sbjct: 163 KTILKTPYYYFVSSSENDYEASGLAIFSKYPIVNKGVIPFGNNHIGNGSIFIDVEVHQKK 222

Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165
           LR+ N++L   +      Y       K           +   L          Q      
Sbjct: 223 LRVYNVHLQSISF-DKQDYTYLDKVKKSMDPDLQPSKRIAGMLK-NAFMKRSMQVDLMKA 280

Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225
            +   +                          +        F   Y   +   +   ID+
Sbjct: 281 HMGNCSIPYLIAGDFNDTPASYAATQMTKSLKSTFREKGSGFGQTYNGKFPNFQ---IDY 337

Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           I ++           +        K SDH PV   L +
Sbjct: 338 IAVT-------KDIEVLNHLVIPAKLSDHFPVRSDLRL 368


>gi|297198294|ref|ZP_06915691.1| endonuclease/exonuclease/phosphatase [Streptomyces sviceus ATCC
           29083]
 gi|297147051|gb|EFH28465.1| endonuclease/exonuclease/phosphatase [Streptomyces sviceus ATCC
           29083]
          Length = 377

 Score = 59.8 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 44/280 (15%), Positives = 86/280 (30%), Gaps = 42/280 (15%)

Query: 4   VTVATWNVN--SIRA---RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           + V TWN+     +    R   L   I E + D++ LQET         E  ++L +H  
Sbjct: 125 LRVMTWNLWFGGTKVHDHRAKQL-KVITETDVDVVGLQETYGSAA---EELAEALGWH-- 178

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
               ++   + I+S++    ++    GD          A   +  + + +   +L +   
Sbjct: 179 --HHRAGTNLGIISRFPITAVL----GDPDVGFYGAAGARIAVEEREVEVWTAHLDYERY 232

Query: 119 ITSTKYD-DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
                            +R    R+    P++  GD+N                 A    
Sbjct: 233 GPYASEPLAHEEVRLAQMRDTLHRIGDSAPVVLVGDFNCPSHLDWPDVEWPVTKAAEEAG 292

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
                 Q   +                +++   +A    ++   RID ++        + 
Sbjct: 293 FGDSFRQARPDAVR----------DPGHTWSPVHAHPEPQD---RIDFVL-HRGL--RVL 336

Query: 238 SAR--IDTKPRGW------TKPSDHTPVIVSLDIPEPRKK 269
            +R  +   PR W        PSDH  VI +  +      
Sbjct: 337 DSRTCVSDTPRTWPDVEDNDWPSDHAAVITTFSLGSGPAP 376


>gi|149175039|ref|ZP_01853662.1| hypothetical protein PM8797T_25206 [Planctomyces maris DSM 8797]
 gi|148846017|gb|EDL60357.1| hypothetical protein PM8797T_25206 [Planctomyces maris DSM 8797]
          Length = 321

 Score = 59.8 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 46/257 (17%), Positives = 78/257 (30%), Gaps = 18/257 (7%)

Query: 17  RIHNLAAWIKENNPDIICLQET--KTEDKNFPFETLQSLNYHIETCGQKSYN---GVAIL 71
           R+  L   I    PD+I  QE   K E+++   + LQ LNYHIE     S N    +  +
Sbjct: 57  RMKLLREQITALQPDLIGFQEAGWKPEEEHQVKQLLQGLNYHIEHESDGSDNKERRLLDV 116

Query: 72  SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWI 131
           +      +                            +              +   +   +
Sbjct: 117 AVASRWPLKRKAFHSLPGSGKALAVEITAPQPIGRLLFVSTFGTARWQFDRELQRERDAV 176

Query: 132 KRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191
                          P I AGD++  P           ++    +     +++   N G 
Sbjct: 177 ALDRFIREISDPNGFPPIIAGDFDATPDSAGIRYLTGLQSLDGHSTHYYDAWKAAGNRGA 236

Query: 192 TDAIRATHDTHHLYS--FWDYYADSWSKNKGIRIDHIML-SP---EATSLLHSARI-DTK 244
                  +      +  FW         +   RID+I L SP      + + S R+   +
Sbjct: 237 GPTWTTQNHYAKKTTEQFWH------LSDHHRRIDYIFLGSPHHFRGYARVVSTRVVLNQ 290

Query: 245 PRGWTKPSDHTPVIVSL 261
           P G   PSDH  V+  +
Sbjct: 291 PVGKDWPSDHFGVMAEI 307


>gi|330508142|ref|YP_004384570.1| endonuclease/exonuclease/phosphatase family [Methanosaeta concilii
           GP-6]
 gi|328928950|gb|AEB68752.1| endonuclease/exonuclease/phosphatase family [Methanosaeta concilii
           GP-6]
          Length = 355

 Score = 59.8 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 46/339 (13%), Positives = 83/339 (24%), Gaps = 76/339 (22%)

Query: 6   VATWNVNSI-----RA-----RIHNLAAWIKENNPDIICLQETKTEDK-------NFPFE 48
           +AT+N+ S+     R+     RI  L   +   + DI+CLQE   + +            
Sbjct: 7   IATFNLMSLDDRPDRSPSLDERIPVLRPQLIRLDADILCLQEICAQHERNGRPRLEALDR 66

Query: 49  TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFI------------- 95
            L+   Y               LS +  + +      +    Q  +              
Sbjct: 67  LLEGTPYESFNRASTVDRDGNYLSHHNLVILSRFDIMEQHQYQHEYAPSPSYKKVTALPE 126

Query: 96  --EATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIF--- 150
             EA      + +    + LP+G  +       K                 +    +   
Sbjct: 127 ELEAREISWERPILHAKVRLPNGAVLDVINLHLKSRRPTNIQGHKLSERTWKTAFGWAEG 186

Query: 151 --------------AGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN-------- 188
                                    +    I    D     +         +        
Sbjct: 187 VFISSMKRIGQALETRILIDNLFDDNRCALIAVCGDFNEEFDEVSIEAIRGDVENTGNMD 246

Query: 189 --MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR 246
             M               YS            KG  +DHI++S    +    + +  +  
Sbjct: 247 LAMRVMVPTERNIPEPARYS-------LLHNGKGKMLDHILVSRTMLAFFKGSEVHNELL 299

Query: 247 GWTKP----------SDHTPVIVSLDIPEPRKKQQDSTS 275
                          SDH PVI   ++PE   +   +TS
Sbjct: 300 HDESIVFAPKIFYPESDHAPVIARFELPESDIRWSTTTS 338


>gi|313158069|gb|EFR57474.1| endonuclease/exonuclease/phosphatase family protein [Alistipes sp.
           HGB5]
          Length = 297

 Score = 59.8 bits (143), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 38/279 (13%), Positives = 73/279 (26%), Gaps = 44/279 (15%)

Query: 4   VTVATWNVNSIR--------------ARIHNLAAWIKENNPDIICLQETKTED-----KN 44
           + + ++N   IR              AR       I++  PD+I  QE + +      + 
Sbjct: 40  LKLLSYN---IRYIGAPGDEGDFAWDARKEASIRMIRDVRPDVIGFQEPRRQQVAYLVEQ 96

Query: 45  FPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
            P      +            + + +  + +   +        L      +   +    +
Sbjct: 97  LPEYGHIEMGRDFGAKDDPGEHLMIMYLRERYELLDHGH--YWLSETPDEVSQGWDGRCR 154

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
            + +               +D  +  I +  R    RL +E     AG         D  
Sbjct: 155 RVTVWARLRDRATGREFCLFDTHLDHIGKTARLEGARLNVERMRSIAGKRTPQFIVGDMN 214

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRID 224
                    C     +      +    TD     H               + K K + ID
Sbjct: 215 ATAGTPGGVCLEPYFKWLKSACEEAPLTDPRPTYH--------------GFGKAKPLHID 260

Query: 225 HIM--LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           HI    +      L  +       G    SDH P++ + 
Sbjct: 261 HIFYRCAEPLRYQLLDST----GYGVQYLSDHYPIVCTF 295


>gi|291241198|ref|XP_002740507.1| PREDICTED: sphingomyelin phosphodiesterase 2, neutral-like
           [Saccoglossus kowalevskii]
          Length = 517

 Score = 59.4 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 44/298 (14%), Positives = 91/298 (30%), Gaps = 29/298 (9%)

Query: 4   VTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDK-NFPFETLQS-LN 54
           + + T N  +I       + RI ++   I   + D++CLQE  +        + L   L 
Sbjct: 130 LKLLTLNCWAIPFLSKLRKERIRHIGEEISTRDYDVVCLQEVWSSKDFKSLKDMLSDCLP 189

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTH--------LPGDDLDVQARFIEATFTINTQTL 106
           Y  +       + + + SK    E+  H              +     +     I    +
Sbjct: 190 YAYQFHSGVVGSAICVFSKSPITEMFYHKYSANGLPHFWHPGEWLTGSMVGLCRIIHHGI 249

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
           +I            + K      +  R ++       ++     + D N++    +    
Sbjct: 250 KINIYVTHLHEETNAIKKYY---YAHRLIQAYELSQFIKFTTSESSDVNVLMGDFNTEQH 306

Query: 167 IIWENDACFTLEVRQ-SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225
                  C  +E+      +        A        + ++  D     W    G RID+
Sbjct: 307 EGGYELICKLIEMNDSWITQQSKANEHSAGITCVSPSNPFTIPDEL-KMWPN--GARIDY 363

Query: 226 IMLSPEATSLLH----SARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMK 279
           I  +      +     +  +   P      SDH  V  +L+I  P + Q+   + N +
Sbjct: 364 IFYNSSQRYDVKCIETNVTMTKVPGKDYSYSDHEGVATTLEI-MPTENQEKQRTSNSQ 420


>gi|157427810|ref|NP_001098811.1| 5'-tyrosyl-DNA phosphodiesterase [Bos taurus]
 gi|281312449|sp|A7YWI9|TYDP2_BOVIN RecName: Full=Tyrosyl-DNA phosphodiesterase 2; Short=Tyr-DNA
           phosphodiesterase 2; AltName: Full=5'-tyrosyl-DNA
           phosphodiesterase; Short=5'-Tyr-DNA phosphodiesterase;
           AltName: Full=TRAF and TNF receptor-associated protein
 gi|157278989|gb|AAI34604.1| TTRAP protein [Bos taurus]
 gi|296474010|gb|DAA16125.1| 5'-tyrosyl-DNA phosphodiesterase [Bos taurus]
          Length = 364

 Score = 59.4 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 46/282 (16%), Positives = 81/282 (28%), Gaps = 53/282 (18%)

Query: 2   SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           SV +  TWN++ +       RAR   + +++   +PD+I LQE        P        
Sbjct: 114 SVFSFITWNIDGLDMNNLLERAR--GVCSYLTLYSPDVIFLQEV------IPP------- 158

Query: 55  YHIETCGQKSYNGVAILSKY-QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
           Y+     + S   +    +      I+          Q         +    L +     
Sbjct: 159 YYAYLKKKASSYKIITGREEGYFTAIMLKKSRVKFKSQEIIPFPNTQMMRNLLCVHVSVS 218

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
            +   + ++  +      K  +      LE               Q       +I+  D 
Sbjct: 219 GNELCLMTSHLESTRGHAKERMNQFKMVLE-------------KMQEAPGSATVIFAGDT 265

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADS---WSKNKGIRIDHIMLSP 230
               +       L N             H  Y+ WD   +S    + N  +R D I    
Sbjct: 266 NLRDQEVTKCGGLPNNILDVWEFLGKPKHCQYT-WDTQMNSNLGIAANCKLRFDRIF--- 321

Query: 231 EATSLLHSARIDT---KPRGWTK------PSDHTPVIVSLDI 263
              +      I        G  K      PSDH  ++ +LD+
Sbjct: 322 -FRAAAEGGHIIPQSLDLLGLEKLDCGRFPSDHWGLLCTLDV 362


>gi|300087680|ref|YP_003758202.1| endonuclease/exonuclease/phosphatase [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
 gi|299527413|gb|ADJ25881.1| Endonuclease/exonuclease/phosphatase [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
          Length = 654

 Score = 59.4 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 44/272 (16%), Positives = 86/272 (31%), Gaps = 57/272 (20%)

Query: 4   VTVATWNV-NSIRAR----IHNLAAWIKENNPDIICLQET---KTEDKNFP-FETLQ--- 51
           + VAT+N+ N   A     +  LA  I+++  D++ LQE       +      E L    
Sbjct: 426 LRVATYNLHNGFNAVGKLDLEALAQNIEDSGADVVALQEISRGWLVNGRVDMLEWLSRRL 485

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
            + Y+        +    +        +   LP + L ++  FI A   ++    ++  +
Sbjct: 486 DMPYYFGPSSGPFWGNALLSRYPITSAVNVPLPSEGLPLERSFIAAILQVDGLNFQVIAV 545

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
           +L H    +              +             +  GD+N  P   +         
Sbjct: 546 HLHHVEGDSDI--------RVAQVSALLDFYNRSSRTVIMGDFNAEPNDQEIKLMR---- 593

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
                                  I  + +    Y+F        S +   RID+I +SP+
Sbjct: 594 -----------------AAGLRDIMLSLEPPPAYTF-------RSDDLFQRIDYIWVSPD 629

Query: 232 ATSLLHSARIDTKPRGWTK-PSDHTPVIVSLD 262
                    + ++ R  T   SDH  V+  ++
Sbjct: 630 L--------VWSEVRLITGTASDHRGVVADIE 653


>gi|146299325|ref|YP_001193916.1| endonuclease/exonuclease/phosphatase [Flavobacterium johnsoniae
           UW101]
 gi|146153743|gb|ABQ04597.1| Endonuclease/exonuclease/phosphatase [Flavobacterium johnsoniae
           UW101]
          Length = 279

 Score = 59.4 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 33/273 (12%), Positives = 74/273 (27%), Gaps = 32/273 (11%)

Query: 4   VTVATWNV------NSIRARIHNLAAWIKEN----NPDIICLQETKTEDKNFPF--ETLQ 51
           + + T+N+      +   A       +        +PDI  +QE         +    L 
Sbjct: 25  LKIMTYNIRLDVASDGENAWPKR-KDYFTSQIQFYSPDIFGVQE--ATPGQVNYIASALP 81

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
           + +       +        +   +    V       L      +   +      +    L
Sbjct: 82  NYSKFGVGREEGGLGEACTIYYKKDRFKVLDSNTFWLSETPNVVSRGWDAACNRVCTYGL 141

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
           +       T   ++  +  +    R    +L L +                         
Sbjct: 142 FKDLKTKKTFYVFNLHLDHMGEVARIKGVQLALSKMKELNTKNYPA----------FLMG 191

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN--KGIRIDHIMLS 229
           D     E  Q  +  + M  T  +          +F     + +  N    + +D+I +S
Sbjct: 192 DFNSEPETAQIAEIKKVMDDTKDVSKEKPFGPSGTF-----NDFKHNEPVTLLLDYIFIS 246

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
             +   +    + +  +    PSDH PV + +D
Sbjct: 247 KNSGLTVQKHAVLSDSKDLKYPSDHLPVFIEID 279


>gi|328858841|gb|EGG07952.1| hypothetical protein MELLADRAFT_105457 [Melampsora larici-populina
           98AG31]
          Length = 511

 Score = 59.4 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 27/104 (25%), Positives = 48/104 (46%), Gaps = 2/104 (1%)

Query: 4   VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQETKTEDK-NFPFETLQSLNYHIETCG 61
           + ++ WNV  + A     L  +++  +PDI+ + ETK + + +      Q    +     
Sbjct: 98  IRISAWNVCGVNACDKKGLKTYLQAEDPDIMIMSETKMQAEPDIMHLKHQYRYRYWGGDP 157

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT 105
           +K Y GVAILSK++P+ +V  LP  D     +     F +    
Sbjct: 158 KKGYAGVAILSKHKPLNVVYGLPTADDQDSTKGQFTDFHLIGTY 201


>gi|300309579|ref|YP_003773671.1| metal-dependent hydrolase [Herbaspirillum seropedicae SmR1]
 gi|300072364|gb|ADJ61763.1| metal-dependent hydrolase protein [Herbaspirillum seropedicae SmR1]
          Length = 265

 Score = 59.4 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 37/282 (13%), Positives = 83/282 (29%), Gaps = 42/282 (14%)

Query: 4   VTVATWNVN-SI-----RARIHNLAAWIKENNPDIICLQETKTEDK------------NF 45
           + VAT+N++  +     R RI  L   + + +PDI+ LQE +                  
Sbjct: 3   LRVATYNIHKGVTSFAGRPRILALKQALAQLDPDILFLQEVQGRHDLNALRHASNWPQQG 62

Query: 46  PFETLQSLNYHIETCGQ----KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI 101
             E L    +H            ++G A++S+++   I      D        +     +
Sbjct: 63  QHEYLAGDTHHAAYGMNAVYDHGHHGNALISRFEIASIRNQDVSDHAYESRGILHCVVPV 122

Query: 102 NTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161
               +    ++L         + D  I  +       +  L   +   +    +      
Sbjct: 123 EGVEVHCYVIHLGLFAGGRRRQIDALIQAVSTSSPPDAPLLIAGDFNDWTNQLS------ 176

Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI 221
                           + + + + +          +        +F             +
Sbjct: 177 --RTLYQNLGVTEVFDQPQPNARGVMQGLRRLGGLSA-PIRPARTFPAMMP-------WL 226

Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           R+D I +       + +A +      W + SDH P++  L +
Sbjct: 227 RLDRIYV-RGF--RVETAEVLKDG-PWARLSDHAPIVTELHL 264


>gi|251791676|ref|YP_003006397.1| Endonuclease/exonuclease/phosphatase [Dickeya zeae Ech1591]
 gi|247540297|gb|ACT08918.1| Endonuclease/exonuclease/phosphatase [Dickeya zeae Ech1591]
          Length = 287

 Score = 59.4 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 40/295 (13%), Positives = 82/295 (27%), Gaps = 46/295 (15%)

Query: 4   VTVATWNVN-SI----RARIHNLAAWIKENNPDIICLQET-----KTEDKNFPFETLQSL 53
           + + ++N+   +    R  +  +A  ++    DIIC+QE      ++   + P E    L
Sbjct: 1   MLIVSYNIQYGLGRDGRYDLARIADEVR--GADIICMQEVERFWQRSGMTDQPAELAALL 58

Query: 54  N-YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
             YH         +   + S  + +          L  +       F +        +  
Sbjct: 59  GEYHWVYGANLDMDAGTVSSDGRVVNRRRQFGTLTLSRRPILSSRNFPLPKFGTLTQHSI 118

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                          I      L        L +     G +   P     +     + +
Sbjct: 119 QQGVLETVIDTGGGAIRVYNTHLSHLCAGTRLPQVDAMLGIFARAPDEGGAWCGGHPDPN 178

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF----WDYYADSWSKNKGI------- 221
           + +T  +     +                   YS        +     +++G+       
Sbjct: 179 SGWTEGLMPLMPQEM---ILMGDLNCLPDSEEYSRLVGPVSPHHGRLVRHRGLMDAWVAA 235

Query: 222 ---------------RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
                          RIDH +L+P     +    +D + +G    SDH P+ V L
Sbjct: 236 GQPENSGSTHPAVGGRIDHCLLTPLLGLTVRRCWVDIENQG----SDHHPLWVEL 286


>gi|29346594|ref|NP_810097.1| hypothetical protein BT_1184 [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|253568042|ref|ZP_04845453.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|29338490|gb|AAO76291.1| putative transmembrane endonuclease/exonuclease [Bacteroides
           thetaiotaomicron VPI-5482]
 gi|251842115|gb|EES70195.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
          Length = 370

 Score = 59.4 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 51/273 (18%), Positives = 85/273 (31%), Gaps = 33/273 (12%)

Query: 2   SVVTVATWNVNSIR------ARIHNLAAWIKENNPDIICLQETKTEDK---NFPFETLQS 52
           S +T+AT+NVNS        +    +AA++KE   DI C QE     +   +     L  
Sbjct: 112 SALTIATYNVNSFNHEHTGFSC-KEIAAYMKELGVDIFCFQEFGINHEFGTDSLRTVLSE 170

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
             Y+         +    L+ +    I         +     +     IN QT+R+ N +
Sbjct: 171 WPYYYVPSSPAGESL-LQLAVFSRYPIKEKQLVTYPNSNNCSLWCDIDINGQTIRLFNNH 229

Query: 113 LPHGNPITSTKY------DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
           L       + +        D     +R     +  L        A   +I     D   P
Sbjct: 230 LQTTEVSRNKRKLEKELRADDTDRAERAALTLADGLHENFKKRAAQAEHINQLISDSPYP 289

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226
            +   D                    +    T    ++Y+F             +RID+I
Sbjct: 290 TLVCGDFNSLPSSYVYQTVKGE--KMNDGFQTCGHGYMYTF-------RYFKHLLRIDYI 340

Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
           + S E         +D         SDH PV++
Sbjct: 341 LHSSEFQ------GVDYFSPDLEY-SDHNPVVM 366


>gi|242007919|ref|XP_002424763.1| TRAF and TNF receptor-associated protein, putative [Pediculus
           humanus corporis]
 gi|212508277|gb|EEB12025.1| TRAF and TNF receptor-associated protein, putative [Pediculus
           humanus corporis]
          Length = 360

 Score = 59.4 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 33/267 (12%), Positives = 83/267 (31%), Gaps = 26/267 (9%)

Query: 4   VTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           +   +WN++ +     + R   +   I+++ PDI+  QE     ++  +   +   Y   
Sbjct: 111 MKFLSWNLDGLDVHNLKRRTRAVIKLIQKHEPDIVFFQEV--IPESAEYFITKLPEYKCL 168

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ-TLRIGNLYLPHGN 117
             G+ +Y  + +L  +       ++         R +  T     +  L++ N +L    
Sbjct: 169 KGGEDNYFTMTLLRIFTIFYDNHYIVDYPNTKMDRNLLVTEAHMGKLKLKLLNTHLESTK 228

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
             +  +         + L F      +    +   +  +   P + ++   +        
Sbjct: 229 EHSEERQQQLSIAFSKCLSFEENSTIIFGGDLNLREKEVK-TPKNFFDLWEFCGSPQQFK 287

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
                 +   N       +       +Y  +     ++ K+       +++  E      
Sbjct: 288 YTWDMTKNSNNSSNFGKFKPKCRFDRIYYRFSNPKRAFPKH------FVLIGSERVPQTQ 341

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDIP 264
           S            PSDH  +IV  D+ 
Sbjct: 342 S-----------FPSDHWGIIVLFDLD 357


>gi|298710453|emb|CBJ25517.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 411

 Score = 59.4 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 2/52 (3%)

Query: 212 ADSWSKNKGIRIDHIMLSPEATSLLHSARID--TKPRGWTKPSDHTPVIVSL 261
           A      KG+RID+ +LS      +   ++      R     SDH P++++L
Sbjct: 358 AMGRYYGKGMRIDYFLLSTALAPRIKEVKVFGSGADRDGFLGSDHCPLMLTL 409



 Score = 50.6 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 26/52 (50%), Gaps = 4/52 (7%)

Query: 5   TVATWNVNSI--RARIH--NLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52
           T+ T+N+N    R   +   +  +++E+ PD++C QE +   K  P    + 
Sbjct: 70  TIVTFNLNGASPRLAKNWNEIKGFLEEHKPDLVCFQEVRLPAKGVPKAKKED 121


>gi|190893918|ref|YP_001980460.1| putative phosphatase protein [Rhizobium etli CIAT 652]
 gi|190699197|gb|ACE93282.1| putative phosphatase protein [Rhizobium etli CIAT 652]
          Length = 288

 Score = 59.4 bits (142), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 42/301 (13%), Positives = 80/301 (26%), Gaps = 58/301 (19%)

Query: 4   VTVATWNVN---SI--RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL----- 53
           +  A++N+     +  R  +  +A  +     D+I LQE     + F       +     
Sbjct: 1   MNFASYNIQYGFGLDGRYDLPRIARSL--EGADVIALQEV---TRGFSRNGFADMVADIA 55

Query: 54  ----NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
               +Y          +  A      P+  +    G+ +  +         +  ++  +G
Sbjct: 56  ALFPDYFWVYGPACDLHVEAPEGGLSPVRGIRFQFGNMVLSRWPIASTRTLLLPRSRTLG 115

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFA---------------SQRLELEEPLIFAGDY 154
            +    G              +                           ++E     G  
Sbjct: 116 KINPQRGATEAVINAPGGAIRVYSVHLDHVSPDERIRQLQFLNAQINAFVQEGGSLTGAA 175

Query: 155 NIIPQPHDCYNPIIWENDACFTLE--VRQSFQKLQNMGFTDAIRATHD----------TH 202
                        +   D     E     +        +    R                
Sbjct: 176 EFDLPEPPLPEDYVILGDFNMEPESPEYCALAGAAGGYYGRVARIGTPIDAFAALEAYRP 235

Query: 203 HLYSFWDYYADSWSKNKGIR--IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
             YS+ +       +N G R  +D+  +S    S L SARIDT+  G    SDH P+ V 
Sbjct: 236 ESYSWMN------PENHGERMHLDYCFVSCGLVSRLQSARIDTQSPG----SDHFPLWVE 285

Query: 261 L 261
           +
Sbjct: 286 I 286


>gi|253702348|ref|YP_003023537.1| endonuclease/exonuclease/phosphatase [Geobacter sp. M21]
 gi|251777198|gb|ACT19779.1| Endonuclease/exonuclease/phosphatase [Geobacter sp. M21]
          Length = 249

 Score = 59.4 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 41/279 (14%), Positives = 78/279 (27%), Gaps = 59/279 (21%)

Query: 5   TVATWNVNSIRARI---------HNLAAWIKENNPDIICLQE-----TK------TEDKN 44
           T+ T+NV+    R+           +A  I     DI+CLQE      +       ++  
Sbjct: 9   TIMTYNVH----RLIGNDRHSSAPRIAEVIHTYQADIVCLQELPGARVRPEVGGACQNLM 64

Query: 45  FPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
                L+S   H     ++    V      + ++      G     + R +     +  +
Sbjct: 65  HELALLESGGRHFFLERERWGKVVLSRFPMRLVQ----AGGLHPQNRYRTVVPRGVLWVE 120

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
               G         +  T  +                 +   P+   GD+N +P      
Sbjct: 121 IDLFGQKLQVVNVHLGLTPQERNYQVRVLTGPEWLSHPDCRPPVALCGDFNTLPSSTIHK 180

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRID 224
                                L +              + ++F             +R D
Sbjct: 181 Q----------------LKNALMDEQEKLKFGH-----NQFTFPSKLPM-------VRFD 212

Query: 225 HIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           HI +SP+    + +  I          SDH P++V L +
Sbjct: 213 HIFVSPDLV--VENELIPRTKLTGA-ASDHLPLVVRLRL 248


>gi|282890589|ref|ZP_06299112.1| hypothetical protein pah_c022o186 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281499586|gb|EFB41882.1| hypothetical protein pah_c022o186 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 330

 Score = 59.4 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 52/276 (18%), Positives = 89/276 (32%), Gaps = 28/276 (10%)

Query: 4   VTVATWNV------------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51
           + + T+NV            N    R+  +   I+E +PDI+ +QE          E   
Sbjct: 62  LRIVTYNVLSNRYDENLEEVNHWSQRLPKIVGLIEEMDPDILGVQE--LYPDQL-KELHA 118

Query: 52  SLN--YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
            L   Y              I  +     +         +        T T+      I 
Sbjct: 119 YLRGAYAFYGKPCVDGEINGIFFRKNRFLVQDRQVWYLDENPKDPSTETLTMLKLKDLIT 178

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
              L   N   + +  +K     R +    Q+     P+I  GD N  P   D  +   +
Sbjct: 179 GKLLAIFNTHLAMQPIEKRELEARLISEHIQKHASHLPIILTGDLNTFPNRPDLIDLPFY 238

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIR---IDH 225
           + D  + L + +  + L +      +          +F     DS   K  G+    +DH
Sbjct: 239 DGD--YILSILKGKKFLNDAKDISLLGHLGPLA---TFTSNGKDSTPFKGIGLPGVFLDH 293

Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           IM+S +    +H+  +         PSDH PVI  +
Sbjct: 294 IMVSNDIQVWVHA--VQAGTVEGHFPSDHMPVIADI 327


>gi|297290189|ref|XP_001105245.2| PREDICTED: 5'-tyrosyl-DNA phosphodiesterase-like [Macaca mulatta]
          Length = 388

 Score = 59.4 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 45/285 (15%), Positives = 81/285 (28%), Gaps = 59/285 (20%)

Query: 2   SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           S+    TWN++ +       RAR   + +++   +PD+I LQE        P        
Sbjct: 138 SMFCFITWNIDGLDLNNLSERAR--GVCSYLALYSPDVIFLQEV------IPP------- 182

Query: 55  YHIETCGQKSYNGVAI-LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
           Y+     + S   +     +     I+       L  Q      +  +    L +     
Sbjct: 183 YYSYLKKRASDYEIITGHEEGYFTAIMLKKSRVKLKSQEIIPFPSTKMMRNLLCVHVNVS 242

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
            +   + ++  +         +      L+               Q       +I+  D 
Sbjct: 243 GNELCLMTSHLESTRGHAAERMNQLKMVLK-------------KMQEAPESATVIFAGDT 289

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG------IRIDHIM 227
               +       L N             H  Y+ WD   +S   N G      +R D I 
Sbjct: 290 NLRDQEVTKCGGLPNNIVDVWEFLGKPKHCQYT-WDTQMNS---NLGITAACKLRFDRIF 345

Query: 228 LSPEATSLLHSARIDT---KPRGWTK------PSDHTPVIVSLDI 263
                 +      I        G  K      PSDH  ++ +LD+
Sbjct: 346 ----FRAAAEEGHIIPRSLDLLGLEKLDCGRFPSDHWGLLCNLDV 386


>gi|213962631|ref|ZP_03390892.1| endonuclease/exonuclease/phosphatase [Capnocytophaga sputigena
           Capno]
 gi|213954626|gb|EEB65947.1| endonuclease/exonuclease/phosphatase [Capnocytophaga sputigena
           Capno]
          Length = 274

 Score = 59.4 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 40/274 (14%), Positives = 84/274 (30%), Gaps = 34/274 (12%)

Query: 4   VTVATWNV------NSIRA-----RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52
           ++V T+N+      + + +     R   +   I + NPDI  +QE       F  E   S
Sbjct: 20  LSVMTYNIRYDNSYDGVNSWTEGNRKEKVFTIINDANPDIFGVQEALAHQLKFLEERFPS 79

Query: 53  LNYH-IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
                +     K     + +   +   ++       L          +       RI + 
Sbjct: 80  YQREGVGRDDGKEAGEHSAIFFKKNRFVLLDKGNFWLSQTPDVPSLGWDAICCN-RICSW 138

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
                       ++       +  +  S  L L +    A +  +I              
Sbjct: 139 VKLKDKKTIFWVFNLHFDHEGKVAQIQSADLVLRKIKEIAKNGKVILMGD---------- 188

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI--RIDHIMLS 229
                     + QK+ +  +   +  T+ T ++ +F     +++  ++ +   ID I + 
Sbjct: 189 --FNLPTEHPAVQKIASQLYDTQLSPTNKTPNMGTF-----NAFKTDEPLKGHIDFIFVQ 241

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                 +   +I         PSDH PV V L +
Sbjct: 242 KSI--KVKQYKIIETRIDSLYPSDHLPVWVQLQL 273


>gi|164687865|ref|ZP_02211893.1| hypothetical protein CLOBAR_01509 [Clostridium bartlettii DSM
           16795]
 gi|164603140|gb|EDQ96605.1| hypothetical protein CLOBAR_01509 [Clostridium bartlettii DSM
           16795]
          Length = 240

 Score = 59.4 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 47/271 (17%), Positives = 89/271 (32%), Gaps = 63/271 (23%)

Query: 4   VTVATWNVNSI---RARIHNL--AAWIKENNPDIICLQET----KT--EDKNFPFETLQS 52
           + + ++N++S               ++K++N DIICLQE     K   +  +   E   +
Sbjct: 22  IKIISYNIHSGTDKNMAPTLFDTINFLKKSNADIICLQEVNESSKVGFQVSSLKEELNMN 81

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           L++        +  G+A  SKY+ I    H+       Q  F+  T  +  + L I N++
Sbjct: 82  LHFGANVVKNNTNYGLATYSKYKIIS-QKHVYLSSTREQRGFLHTTVRVKDKKLHIINIH 140

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
           L  G+     + ++  ++IK   +     L                           E +
Sbjct: 141 LGLGDKERKKQINELQNYIKGLKKDYFVVL-----------------------GDFNEGN 177

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                E+     +  N           D                     RID++ +S   
Sbjct: 178 LSLDDEIIIDVAEKLNKSNILTFSTELD---------------------RIDYMFVSNNI 216

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              + S  +  K       SDH P++  + I
Sbjct: 217 E--VKSYEVLIKNM-----SDHYPIVAKISI 240


>gi|307294159|ref|ZP_07574003.1| Endonuclease/exonuclease/phosphatase [Sphingobium chlorophenolicum
           L-1]
 gi|306880310|gb|EFN11527.1| Endonuclease/exonuclease/phosphatase [Sphingobium chlorophenolicum
           L-1]
          Length = 244

 Score = 59.4 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 36/271 (13%), Positives = 65/271 (23%), Gaps = 48/271 (17%)

Query: 1   MSVVTVATWNVNSIRARI--------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52
           M  V VA++N   IR  I          +   + E + DII LQE             + 
Sbjct: 13  MRTVRVASYN---IRKAIGTDRRRVPERVIDVLNELDADIIALQE-----------ADRR 58

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
                          +   S Y+P+ +  H+        A  +     +    +      
Sbjct: 59  FGVRSAALPPWLLESI---SPYKPVPLNVHVDSMGWHGNAILVRKDVEVGAHDVLHLPCL 115

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
            P G  +     D     +       S     ++        +            + E  
Sbjct: 116 EPRGATMAEVTLDKGSLRVFGMHLDLSGLWRRKQAAAVIHAASSRDAMPTVLMGDLNEWS 175

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
           A     +    +         +  A                        R+D IM   + 
Sbjct: 176 AERG-CLADFARHYSFAPCGRSFHARRPVA-------------------RLDRIMHCGQL 215

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              L    +        + SDH P+     +
Sbjct: 216 --KLVDCGVHESA-AARRASDHLPIWAEFKL 243


>gi|262037757|ref|ZP_06011199.1| putative endonuclease/exonuclease/phosphatase [Leptotrichia
           goodfellowii F0264]
 gi|261748229|gb|EEY35626.1| putative endonuclease/exonuclease/phosphatase [Leptotrichia
           goodfellowii F0264]
          Length = 257

 Score = 59.4 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 39/270 (14%), Positives = 74/270 (27%), Gaps = 45/270 (16%)

Query: 1   MSVVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQET-----KTEDKNFPFETLQSLN 54
             ++   T+N+   R A    +   IK   PD I LQE      ++  ++   +    + 
Sbjct: 25  FRMM---TYNIYGGRLANGTKIGQSIKRYKPDFIALQEVDKFTKRSNIRDITKDIADEMG 81

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           Y+     +               +                 +           +    + 
Sbjct: 82  YNFYYFQKSRDYDSGEFGIAFVSKYPIEKILTYELPSIGIEKRQVIAAKIEKSVFGKTVL 141

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
             N     K + K   +   L  +   +   +     GD N++P             D  
Sbjct: 142 FINTHLDYKQEAKNDELNSLLIMSE--IAEGDIKFLGGDLNMLPTTEYYNQITQNWKD-- 197

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
                                          ++ +       KN+  RID+I+       
Sbjct: 198 -------------------------------TYLEGDKAGVRKNEDPRIDYILGDFSTNW 226

Query: 235 LLHSA-RIDTKPRGWTKPSDHTPVIVSLDI 263
            L  +  I+   + WTK SDH P +  +DI
Sbjct: 227 KLKESFFINDNTQEWTKLSDHLPYMTIVDI 256


>gi|221091679|ref|XP_002170010.1| PREDICTED: similar to pol-like protein [Hydra magnipapillata]
          Length = 578

 Score = 59.4 bits (142), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 38/263 (14%), Positives = 75/263 (28%), Gaps = 33/263 (12%)

Query: 1   MSVVTVATWNVNSIRARIH--NLAAWIKENNPDIICLQETKT--EDKNFPFETLQSLNYH 56
           M+ + + T NVN +   +   N+  ++K    D ICLQET    E +       + L   
Sbjct: 1   MA-LNIVTLNVNGLNDDVKRYNILKYLKLKQYDFICLQETHCSKEKEQLLQTEWKKLTGG 59

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                 K+     +    +       +P +              +  +   I        
Sbjct: 60  SSIWNCKTSRECGVSILTKTETPFNDVPFEKDGRVIATNILYKNLTIRLFIIY------- 112

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
            P    + +   + + +  +     + L +  +        P        +   N++   
Sbjct: 113 GPNDPQRKEYFFASLDKHTKTCDLLILLGDFNMV-----ENPIIDRDGGDLFNRNNSLGK 167

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
                           D  R      + ++F     +   K    RID I    +    +
Sbjct: 168 ---VNLQSFCNKYVLCDLYRKVKPFEYGFTF-----EKSDKLYRSRIDRIYT--QIQPTI 217

Query: 237 H-SARIDTKPRGWTKPSDHTPVI 258
             + +I       T  SDH  VI
Sbjct: 218 EYNCKI-----ADTMLSDHRAVI 235


>gi|218258829|ref|ZP_03475089.1| hypothetical protein PRABACTJOHN_00746 [Parabacteroides johnsonii
           DSM 18315]
 gi|218225190|gb|EEC97840.1| hypothetical protein PRABACTJOHN_00746 [Parabacteroides johnsonii
           DSM 18315]
          Length = 292

 Score = 59.0 bits (141), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 39/267 (14%), Positives = 74/267 (27%), Gaps = 21/267 (7%)

Query: 2   SVVTVATWNV------NSIRA---RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52
           S + VAT+N+      + + A   R   +   I+ ++ DI   QE     K+      + 
Sbjct: 34  SELNVATFNLRMDTEKDGVNAWPNRKEMVKGLIRFHDFDIFGTQE---GFKHMLDGVAEL 90

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
             Y     G+         S          L        +                 N  
Sbjct: 91  EGYAYIGAGRDDGEDAGEHSAIFYKTGRFDLLDKGNFWFSE--TPDVPGKGWDATCCNRI 148

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
              G             +   +             L+ A    I       +    +   
Sbjct: 149 CSWGKFRDKESGKVFYFFNSHYDHQGKVARRESSKLLIARIKQIAGTDATVFATGDFNAV 208

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                 V  +   L    +  + +  + T    ++  +  DS  KN   RID+I ++   
Sbjct: 209 PTDEPMVTLASDGLLLDSYGLSEQPHYGTEG--TYNSFKTDSEMKN---RIDYIWVTKG- 262

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIV 259
            + +    +    +    PSDH PV++
Sbjct: 263 -TKVKKYAVLNDMQYGRFPSDHFPVMI 288


>gi|171060370|ref|YP_001792719.1| endonuclease/exonuclease/phosphatase [Leptothrix cholodnii SP-6]
 gi|170777815|gb|ACB35954.1| Endonuclease/exonuclease/phosphatase [Leptothrix cholodnii SP-6]
          Length = 358

 Score = 59.0 bits (141), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 43/264 (16%), Positives = 77/264 (29%), Gaps = 21/264 (7%)

Query: 4   VTVATWNVNSIRA-RIHNLAAWIKE----NNPDIICLQET-KTEDKNFPFETLQSLNYHI 57
           + V T+N+ S RA       A I E    +NPD+I +Q+  +  D + P        +  
Sbjct: 105 LRVMTYNIKSYRADEKPGGYALIAEEVLRHNPDVIVMQDANRLTDGHAPMPEAMKRVFAP 164

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
                +    VA     +   +      +      R      T     + +  +    G 
Sbjct: 165 HQVYMRGQYVVASRHPLRGCRVNPLPEAEHNARYVRCTVRVGTQAVDLVTVHFISPRDGL 224

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
                    +        +        +   +                  +         
Sbjct: 225 NAA----RHERLDGVDEWKQNFAVRLKQARQLVRDLTETPLLDSRGMAQPLIVAGDLNAP 280

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
           E     Q L  +G  DA  +    +  Y+              +RIDHI++SP+      
Sbjct: 281 ESSPVVQSLLALGLRDAWSSAAIGYG-YTH---GHSLRPNIDLLRIDHILVSPQ------ 330

Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261
              ++    G T+ S+H PVI  L
Sbjct: 331 -VGVERTFVGGTEGSEHRPVITDL 353


>gi|50551027|ref|XP_502987.1| YALI0D18458p [Yarrowia lipolytica]
 gi|49648855|emb|CAG81179.1| YALI0D18458p [Yarrowia lipolytica]
          Length = 454

 Score = 59.0 bits (141), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 44/310 (14%), Positives = 95/310 (30%), Gaps = 39/310 (12%)

Query: 4   VTVATWNVNSIRA-------RIHNLAAWIKEN--NPDIICLQETKTEDKNFP------FE 48
           V V T N   ++        R+  ++A + ++  + DI+CLQE    + +F        +
Sbjct: 51  VRVLTLNCWGLKLVSKLRPLRLEAISAQLAQDGDSYDIVCLQEVWV-ESDFDQIKKACVD 109

Query: 49  TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT---------HLPGDDLDVQARFIEATF 99
                 Y+           V      +   +              GD    ++       
Sbjct: 110 HFPYTKYYYSGIIAGPGLAVLSRWPIESAYVHRFGLNGRPSAFFRGDWYVGKSVASATII 169

Query: 100 TINTQTLRIGNLYLPHGNPITSTKYDDKISWI-KRFLRFASQRLELEEPLIFAGDYNIIP 158
             +   + I N ++          Y    +       R A + ++     I  GD N  P
Sbjct: 170 HPSNHRIEILNAHMHAPYGPGDANYTCHRTSQAWEMARIAKRSMDAGNLTIVTGDLNSRP 229

Query: 159 QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN 218
                        +     +  +S     +   ++            +      +SW  +
Sbjct: 230 SSLT----HQLFENMALLQDAWESRHGEFSGDLSEMTPEQQIEEAGVTCNS-RLNSWRAS 284

Query: 219 KGI----RIDHIMLSPEATSLLHSARID--TKPRGWTKPSDHTPVIVSLDI-PEPRKKQQ 271
           + +    R+D+I   P   + +  AR+    K  G    SDH  V    ++ P+ + + +
Sbjct: 285 RPLSDACRLDYIFFDPS-RATVREARVAFTDKIEGGCSVSDHFGVSAVFELTPQDKSRHR 343

Query: 272 DSTSQNMKPI 281
             +S  +  +
Sbjct: 344 KVSSATLTTM 353


>gi|238883107|gb|EEQ46745.1| conserved hypothetical protein [Candida albicans WO-1]
          Length = 497

 Score = 59.0 bits (141), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 23/177 (12%), Positives = 52/177 (29%), Gaps = 23/177 (12%)

Query: 1   MSVVTVATWNV-------------NS------IRARIHNLAAWIKENNPDIICLQET-KT 40
           +  + + ++N+             N       +R++I  L   +K  N DI+CLQE  K 
Sbjct: 90  LPSIKIMSYNILAQTLIRREIYPTNGKILKWSVRSQI--LLDELKHYNADIMCLQEVDKV 147

Query: 41  EDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT 100
           + + F    L+ L Y        + N   ++     +    H     LD       +  +
Sbjct: 148 QYEGFWVSQLEKLGYSTRFYRNNTKNHGCVIVFRDKLFTCKHQSFIRLDQDLNQEASEKS 207

Query: 101 INTQTL-RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI 156
           +    +      ++ +     +   +             +  L       +      
Sbjct: 208 LPPARIATTNIAFMAYLEFTPTFIKEYPCLEETNGFIIGTTHLFWHPFGTYERARQT 264


>gi|297197811|ref|ZP_06915208.1| endonuclease/exonuclease/phosphatase [Streptomyces sviceus ATCC
           29083]
 gi|197716600|gb|EDY60634.1| endonuclease/exonuclease/phosphatase [Streptomyces sviceus ATCC
           29083]
          Length = 305

 Score = 59.0 bits (141), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 45/272 (16%), Positives = 86/272 (31%), Gaps = 32/272 (11%)

Query: 6   VATWNV--------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57
           V T+N+        NS   R   +   +++  P ++  QE          +    L  H 
Sbjct: 51  VMTFNLRFASTSEPNSWAVRRPVMRQLLRQEAPTVLGTQE---GLYQQLLDIHSDLGAHY 107

Query: 58  ETCGQ-----KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           +  G            A+    + +  V H      D        T+      +     +
Sbjct: 108 DWIGTGREGGSHDESTAVFYDTRRLAPVEHDTLWLSDTPRVVGSNTWGAALPRIV---TW 164

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
           +   +     +    ++     +   ++          A   +      D  +P++   D
Sbjct: 165 VRFRDRAAGGREFYVLNTHFDHVSQYARER-------SAQFLSRRIAEFDRTSPVLVTGD 217

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY-SFWDYYADSWSKNKGIRIDHIMLSPE 231
                   +++  L   G  D   A  +   LY +F  Y   +     G RID I+ +P 
Sbjct: 218 FNAEAHDNRAYDTLLATGLVDTWDAAAERSRLYATFHGYRPLTPD---GDRIDWILATPG 274

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             + +  A I+T       PSDH PV  +L +
Sbjct: 275 --TTVQRAVINTFAMDGQFPSDHLPVQATLTL 304


>gi|38346800|emb|CAD41368.2| OSJNBa0088A01.7 [Oryza sativa Japonica Group]
          Length = 1324

 Score = 59.0 bits (141), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 34/275 (12%), Positives = 68/275 (24%), Gaps = 42/275 (15%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPD----IICLQETKTEDKNFPFETLQSL--NYHIET 59
           + +WNV  + +        + E   D    I C QETK    +   + L      Y +++
Sbjct: 459 LLSWNVRGLNSPAK--CTVLHELMVDTACSIACFQETKLRAID---DVLARYLGGYKLDS 513

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
              K   G              ++    L   +   + +      +  I  +Y P  +  
Sbjct: 514 YAIKPARGTRGGILLLWNSNSINITEVRLRRYSMTAKVSLLHTADSFTISAVYGPTRHRE 573

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                                  +           N               N        
Sbjct: 574 KEIFLRQIRRLKPANNEPWLLFGDFNMIYRACDKSNSNINLRRMRRFRAAINHC------ 627

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
                          ++  H  +  +++     +       +R+D    +     L    
Sbjct: 628 --------------ELKEIHLQNRKFTW----TNERRHPTMVRLDRFFCNENW-DLAFGH 668

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDST 274
            I       T  SDH P++    +  P+  Q+  T
Sbjct: 669 HILHTLSSGT--SDHCPLL----LSNPQGPQRPRT 697


>gi|299067973|emb|CBJ39187.1| putative metal dependent endonuclease/phosphatase [Ralstonia
           solanacearum CMR15]
          Length = 248

 Score = 59.0 bits (141), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 37/276 (13%), Positives = 83/276 (30%), Gaps = 46/276 (16%)

Query: 1   MSVVTVATWNVN----SI--RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           M  + VAT+N++     I  R R+H++   +   + DI+ LQE +  +       L   +
Sbjct: 1   MLRLRVATYNIHKGVTGIARRVRVHDVRQGLHTMDADIVFLQEVQDRNDRLVAAELFDPH 60

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           Y        +         Y       +   D        +     + ++ L I +    
Sbjct: 61  Y--------TQLRYLATDVYPHTVYGRNAVYDHGHHGNAILSRYPILLSENLDISDHRFE 112

Query: 115 HGNPITSTKY--DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD---CYNPIIW 169
               + +       ++  +       ++    +   +     +++P         +   W
Sbjct: 113 QRGLLHAVADLGFGEVHLLCAHFGLFARSRRRQAEALIERVCSVVPTDAPLVVAGDFNDW 172

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
            N     +       ++ +   +     T  +H  +               +R+D I   
Sbjct: 173 NNRLDRVICQSLGVTEVADKAVSARPLRTFPSHLPW---------------LRLDRIY-- 215

Query: 230 PEATSLLHSARIDTKP----RGWTKPSDHTPVIVSL 261
                 +    ID       R W + SDH P++  L
Sbjct: 216 ------VRGFEIDRAHALTGRDWAQRSDHVPLLAEL 245


>gi|68473535|ref|XP_719092.1| potential rRNA 3' end processing RNAse Ngl2p [Candida albicans
           SC5314]
 gi|46440893|gb|EAL00194.1| potential rRNA 3' end processing RNAse Ngl2p [Candida albicans
           SC5314]
          Length = 519

 Score = 59.0 bits (141), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 23/177 (12%), Positives = 52/177 (29%), Gaps = 23/177 (12%)

Query: 1   MSVVTVATWNV-------------NS------IRARIHNLAAWIKENNPDIICLQET-KT 40
           +  + + ++N+             N       +R++I  L   +K  N DI+CLQE  K 
Sbjct: 112 LPSIKIMSYNILAQTLIRREIYPTNGKILKWSVRSQI--LLDELKHYNADIMCLQEVDKV 169

Query: 41  EDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT 100
           + + F    L+ L Y        + N   ++     +    H     LD       +  +
Sbjct: 170 QYEGFWVSQLEKLGYSTRFYRNNTKNHGCVIVFRDKLFTCKHQSFIRLDQDLNQEASEKS 229

Query: 101 INTQTL-RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI 156
           +    +      ++ +     +   +             +  L       +      
Sbjct: 230 LPPARIATTNIAFMAYLEFTPTFIKEYPCLEETNGFIIGTTHLFWHPFGTYERARQT 286


>gi|150006466|ref|YP_001301210.1| hypothetical protein BVU_3985 [Bacteroides vulgatus ATCC 8482]
 gi|254881617|ref|ZP_05254327.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|294777013|ref|ZP_06742471.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           vulgatus PC510]
 gi|319643001|ref|ZP_07997635.1| hypothetical protein HMPREF9011_03236 [Bacteroides sp. 3_1_40A]
 gi|149934890|gb|ABR41588.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482]
 gi|254834410|gb|EET14719.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|294449071|gb|EFG17613.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           vulgatus PC510]
 gi|317385366|gb|EFV66311.1| hypothetical protein HMPREF9011_03236 [Bacteroides sp. 3_1_40A]
          Length = 353

 Score = 59.0 bits (141), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 38/264 (14%), Positives = 75/264 (28%), Gaps = 19/264 (7%)

Query: 2   SVVTVATWNVNSIRARI-----HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56
           + + V T+NV+S    I        A  + +   D++C QE +  + +F  + LQ  N +
Sbjct: 101 NRLKVVTYNVHSFGNEITGFSAKEFAEMMNKEETDVLCFQEYRG-NGDFTEQDLQ--NTY 157

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
            +             + Y    I      +  +     I A   +   T+RI N+++   
Sbjct: 158 AKIFPYSFIPEGLSQAIYSRYPIRQSQTIEFPNTNNGAIWADLDVKGMTIRIINVHMQTT 217

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
           +         +    +   +     L   +                       E      
Sbjct: 218 SFDRMRSKAAQARGEQDEEQERGIYLGYSDNFRENTVRRAGQAEQISSLINATEYPLIVC 277

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
            +              + ++    T        Y A     +  +RID++  S      +
Sbjct: 278 GDFNDPPGTFTYETLKNGLKDGFQTAGE----GYGATYRGFHHLLRIDYLFHS-TLLEGI 332

Query: 237 HSARIDTKPRGWTKPSDHTPVIVS 260
               I          SDH PV + 
Sbjct: 333 KYKVIPYD------MSDHNPVYLE 350


>gi|147820649|emb|CAN72097.1| hypothetical protein VITISV_042083 [Vitis vinifera]
          Length = 1832

 Score = 59.0 bits (141), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 28/262 (10%), Positives = 65/262 (24%), Gaps = 58/262 (22%)

Query: 1    MSVVTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
            M V  + +WNV      ++   +  +I+    D++C+QETK +                 
Sbjct: 906  MKV-KILSWNVRGANDSSKRKVIKTFIRNQRVDLMCIQETKVQ----------------- 947

Query: 59   TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
                       +              G               +    + +          
Sbjct: 948  ----------CMTDSIARSIGSGRFLGWKAVNAEGAFRRFRNVEDGNVXVFTG------- 990

Query: 119  ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
                        +             EE     G +         +N  ++  +      
Sbjct: 991  ------------VYDPFSKVEXDALWEEFGAIRGLWEDPWCIGGDFNITLFSRERSGQRR 1038

Query: 179  VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLH 237
            +  + +    +     +         +++     +    N+   R+D  ++SP       
Sbjct: 1039 ISSAMRNFAEIVDDLGLVDLPLQGGDFTW-----NGGLNNQTWARLDRFLVSPSWIDQFS 1093

Query: 238  SARIDTKPRGWTKPSDHTPVIV 259
                   PR     SDH P+++
Sbjct: 1094 GINQCRLPR---PVSDHFPIML 1112


>gi|225018561|ref|ZP_03707753.1| hypothetical protein CLOSTMETH_02510 [Clostridium methylpentosum
           DSM 5476]
 gi|224948663|gb|EEG29872.1| hypothetical protein CLOSTMETH_02510 [Clostridium methylpentosum
           DSM 5476]
          Length = 300

 Score = 59.0 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 34/271 (12%), Positives = 81/271 (29%), Gaps = 21/271 (7%)

Query: 3   VVTVATWNVN---------SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
            + + ++N+              R   +   I++++ DII +QE     +    +    L
Sbjct: 35  TIQIMSFNLRRDPFYTKRFGWGNRRDGVIEIIRQSDADIIGVQE--MTPE-MKKDLETKL 91

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
           +        +S   +   S          +  +     ++  +   +             
Sbjct: 92  DEFSIFGTGRSRKLLGEYSGILVRNETVEVLSNHTFWLSKNPDKQGSHALLAPFPRICTT 151

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII-PQPHDCYNPIIWEND 172
                  S +     +     + + +++L  +  L +  DYN   P P         +  
Sbjct: 152 IEVYLKRSKQRMRVFNTHFDHISWFARKLSAQTILKYIRDYNSKDPLPVILTGDFNAKPY 211

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
           +     +  S + +       A   +    + Y  +      +       ID+I  S + 
Sbjct: 212 SKAIKMLITSNEYVSLNNIFTAFDISDTYINTYHGFSDRLSKYP------IDYIFFSNDF 265

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              ++  +I         PSDH P++  L I
Sbjct: 266 V--VNDFQILKNKPNGEYPSDHFPILARLQI 294


>gi|301113944|ref|XP_002998742.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262112043|gb|EEY70095.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 525

 Score = 59.0 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 39/307 (12%), Positives = 75/307 (24%), Gaps = 59/307 (19%)

Query: 5   TVATWNV-----------NSIR-----ARIHNLAAWIKENNPDIICLQETK--------T 40
            + ++NV              R      R+ +L  ++KE   DII  QE +         
Sbjct: 229 RILSYNVWNTNPSSDVYGAGRRWDQYAKRLDHLVEFVKEAQADIIGFQEVRYDGVFGDPA 288

Query: 41  EDKNFPFETLQSLNYHIETC--------GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQA 92
                     +   Y                        S      +V            
Sbjct: 289 NHAQVKHLADRLPGYQYVYQAAMSYINSRMPHERIEEGPSILSRYPVVATDYLLLSRDPN 348

Query: 93  RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG 152
              ++   +    +     +      +T     ++     +   +   R    +  +  G
Sbjct: 349 DPNDSHQRLCLHAVVDYPRWGEIDVYVTHLSLSERSREQTKVEIWEYMRQGKGKTQVLLG 408

Query: 153 DYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYA 212
           D N  PQ                T +++ ++ ++       +     D  H ++F     
Sbjct: 409 DLNSEPQSLGIRFLSGQAELLGQTTDMKDAWLEVHKEAKPRS-TDPDDRQHKFTFPS--- 464

Query: 213 DSWSKNKGIRIDHIMLSPEATSLLHSARID-TKPRGWTK----------------PSDHT 255
                N   RID ++        +    I   +P   TK                 SDH 
Sbjct: 465 ----DNPSKRIDFVLY--RGEGRVKECEIIGQEPTKDTKDFPDDVGMLHASSPVYASDHR 518

Query: 256 PVIVSLD 262
            VI    
Sbjct: 519 GVIAEFK 525


>gi|218462948|ref|ZP_03503039.1| putative phosphatase protein [Rhizobium etli Kim 5]
          Length = 288

 Score = 59.0 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 40/296 (13%), Positives = 78/296 (26%), Gaps = 48/296 (16%)

Query: 4   VTVATWNVN---SI--RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL----- 53
           +  A++N+     +  R  +  +A  ++    DII LQE     + F       +     
Sbjct: 1   MNFASYNIQYGFGLDGRYDLARIARSLER--ADIIALQEV---TRGFSRNGFADMVAGIA 55

Query: 54  -----NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108
                ++ +       +                   G+ +  +   +     +  ++  +
Sbjct: 56  AFFPDHFWVYGPACDLHVEADQGKSAPAPGT-RFQFGNMVLSRWPIVSTRTLLLPRSRTL 114

Query: 109 GNLYLPHGNPITSTKYD---------DKISWIKRFLRFASQRLELEEPLIF------AGD 153
           G +    G                                Q L               G 
Sbjct: 115 GKINPQRGATEAVITVPGGAIRVYSVHLDHVSPDERIRQLQFLNAHINAFVQEGGSLTGA 174

Query: 154 YNIIPQPHDCYNPIIWENDACFTLE--VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYY 211
                         +   D     E     +        +    R         +   Y 
Sbjct: 175 AEFDLPEPPLPEDYVIMGDFNMEPESPEYCALAGAAGGYYGRVARIGTPVDAFATLEAYR 234

Query: 212 ADSW----SKNKGIR--IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
            +S+     ++ G R  +D+  +S    S L SARIDT+  G    SDH P+ V +
Sbjct: 235 PESYSWMDPEDHGKRMHLDYCFVSCGLVSRLKSARIDTQSVG----SDHFPLWVEI 286


>gi|60683195|ref|YP_213339.1| hypothetical protein BF3749 [Bacteroides fragilis NCTC 9343]
 gi|60494629|emb|CAH09430.1| putative exported protein [Bacteroides fragilis NCTC 9343]
 gi|301164714|emb|CBW24273.1| putative exported protein [Bacteroides fragilis 638R]
          Length = 678

 Score = 59.0 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 41/284 (14%), Positives = 73/284 (25%), Gaps = 37/284 (13%)

Query: 2   SVVTVATWNVN--SI---RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56
           ++V V  WN+    I         +   I+ +  D+I +QE              SL YH
Sbjct: 409 NIVKVLQWNIWHGGIHLGNEGQQRVLDLIRSSRADVIMMQE----AYGIQQMLADSLGYH 464

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
           ++T      N                    +                  LR         
Sbjct: 465 LKT-HSLKDNLAMYSRFPLEAIAWREPFKSNPAKITLPNGKRIMFVDCWLRYAYRPEYTS 523

Query: 117 NPITSTKYDDKI----------SWIKRFLRFASQRLELEEPLIFAGDYN-IIPQPHDCYN 165
                                      + +  +  LE + P+I  GD+N           
Sbjct: 524 GYAEKGLDPSVWVAEDSILALPDIRNIYTKDIAPNLETDMPVIVTGDFNSCSHLDWTERA 583

Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG----I 221
             +      +      + + +   GF D+ R  +     Y        + +   G     
Sbjct: 584 KPLHHG---YGPVAFPASRYMLENGFKDSFREKNPDEVAY-----QGGTVAAIYGQMQMS 635

Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTK--PSDHTPVIVSLDI 263
           RID I         + S++I            SDH  V+   ++
Sbjct: 636 RIDFIYYKGGL--KVLSSKIVRTAPEIDYVWASDHAAVLTVFEV 677


>gi|34392560|dbj|BAC82609.1| pol-like protein [Danio rerio]
          Length = 1329

 Score = 59.0 bits (141), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 36/256 (14%), Positives = 67/256 (26%), Gaps = 27/256 (10%)

Query: 1   MSVVTVATWNVNSIRARIHNL--AAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           M  + +A+ N+N  R           IKE   D++ +QET ++  N      +     I 
Sbjct: 34  MGELNIASLNINGAREGKKRFYLFEMIKEKKIDVLFVQETHSDALNACDWAREYNGLPIL 93

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
           +       GVA+L     I     +         +            + +          
Sbjct: 94  SHLSSVSGGVAVLFSKNFIPCSYQVEEIINGRLLKIRAQFENSVFVFISV----YVPTRA 149

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
           I    + + +S +          +   +        +                       
Sbjct: 150 IERMCFLETLSNVLANCNTEDVLILGGDFNCTESSLDRNHVE-------------PHMPS 196

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
            R+  Q +     TD  R  +     Y++   Y +  S     R+D         +L   
Sbjct: 197 QRRLIQLIHFNDITDIWRNFNSYQRQYTWLHTYDNLLSL---ARLDRFYGYRHQLNLFKE 253

Query: 239 ARIDTKPRGWTKPSDH 254
             I          SDH
Sbjct: 254 CVI-----SPVGFSDH 264


>gi|298283547|gb|ADI72893.1| DNA lyase [Ophiocordyceps unilateralis]
          Length = 227

 Score = 58.6 bits (140), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 34/91 (37%), Gaps = 14/91 (15%)

Query: 1  MSVVTVATWNVNSIR----------AR-IHNLAAWIKENNPDIICLQETKTEDKNFPFET 49
          ++ + + TWNVN IR          AR    +   ++    DI+ +QE K + K+   + 
Sbjct: 4  LAKMRLTTWNVNGIRNPFSYQPWNTARSFSAMFDILET---DIVVMQELKIQRKDLKDDM 60

Query: 50 LQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80
          +    +       K   G + +  Y      
Sbjct: 61 VLVDGWDCYFSLPKHKKGYSGVGIYTRNATC 91


>gi|242006795|ref|XP_002424230.1| sphingomyelin phosphodiesterase, putative [Pediculus humanus
           corporis]
 gi|212507599|gb|EEB11492.1| sphingomyelin phosphodiesterase, putative [Pediculus humanus
           corporis]
          Length = 439

 Score = 58.6 bits (140), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 32/244 (13%), Positives = 64/244 (26%), Gaps = 31/244 (12%)

Query: 4   VTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDK--NFPFETLQSLN 54
           + V T N   +       + RI  +A ++  ++ DI+CLQE  ++        +    L 
Sbjct: 15  IRVFTLNCWGLPCFSKNKKCRITAIAEYLSSSDLDIVCLQEIWSKKDYLYISKKCFLQLP 74

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL-------- 106
           Y          +G+ I SK+   ++  H    +                           
Sbjct: 75  YSHYFNSFIIGSGLCIFSKHPISDVYFHQWPINGYAHKIHQGDWLAGKGVAFARIKIKDL 134

Query: 107 ---RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                        N   +     ++       +F    +E  +  + AGD N  P     
Sbjct: 135 VVNVYNAHLHAEYNIHGTEYLSHRVLQAFDTSQFIRLTIEDCDLAVLAGDLNTEPDDLAI 194

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223
                           ++          +        +                 +G RI
Sbjct: 195 KILNQNAQLTDCYFVAQKKTLTFFGTNESTRNSYAPKSEV-----------KRLPQGKRI 243

Query: 224 DHIM 227
           D+I+
Sbjct: 244 DYIL 247


>gi|53791238|dbj|BAD52447.1| p97Bcnt bucentaur [Tragulus javanicus]
          Length = 399

 Score = 58.6 bits (140), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 38/290 (13%), Positives = 70/290 (24%), Gaps = 37/290 (12%)

Query: 6   VATWNVNSIRARIHNLAAWIKEN----NPDIICLQETKTE-DKNFPFETLQSLNYHIETC 60
           + TWNV S+          +K+     N DI+ + E K         +       H    
Sbjct: 106 IGTWNVRSMN---PGKLDVVKQEMDRINIDILGISELKWTGMGELNSDD------HYIYY 156

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
             +       ++      +   + G +L                   I            
Sbjct: 157 CGQQSLRRNGVALIVNKRVQNAIIGCNLKNDRMISLRFQGKPFNLTVIQVFAPTPYAEEG 216

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
                 +       +      L +            IP     +   +        ++  
Sbjct: 217 EVYRFYEDLQHLLEITPKIDVLFIIGDWNAKVGSQEIPGITGRFGLGMQNEAGRRLIDFC 276

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
                  N            +  LY++         +     ID+I+      S + SA+
Sbjct: 277 H-----HNRLVIANTLFQQPSRRLYTWTSPDGRFRDQ-----IDYIICRQRWRSSVQSAK 326

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI----------PEPRKKQQDSTSQNMKP 280
                 G    SDH  +I    +          P     + D TS+  KP
Sbjct: 327 TRP---GADCGSDHKLLIAKFRLKLKIIPKTTRPFRGTNEADDTSEESKP 373


>gi|40363523|dbj|BAD06249.1| p97Bcnt [Tragulus javanicus]
          Length = 574

 Score = 58.6 bits (140), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 38/290 (13%), Positives = 70/290 (24%), Gaps = 37/290 (12%)

Query: 6   VATWNVNSIRARIHNLAAWIKEN----NPDIICLQETKTE-DKNFPFETLQSLNYHIETC 60
           + TWNV S+          +K+     N DI+ + E K         +       H    
Sbjct: 239 IGTWNVRSMN---PGKLDVVKQEMDRINIDILGISELKWTGMGELNSDD------HYIYY 289

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
             +       ++      +   + G +L                   I            
Sbjct: 290 CGQQSLRRNGVALIVNKRVQNAIIGCNLKNDRMISLRFQGKPFNLTVIQVFAPTPYAEEG 349

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
                 +       +      L +            IP     +   +        ++  
Sbjct: 350 EVYRFYEDLQHLLEITPKIDVLFIIGDWNAKVGSQEIPGITGRFGLGMQNEAGRRLIDFC 409

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
                  N            +  LY++         +     ID+I+      S + SA+
Sbjct: 410 H-----HNRLVIANTLFQQPSRRLYTWTSPDGRFRDQ-----IDYIICRQRWRSSVQSAK 459

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI----------PEPRKKQQDSTSQNMKP 280
                 G    SDH  +I    +          P     + D TS+  KP
Sbjct: 460 TRP---GADCGSDHKLLIAKFRLKLKIIPKTTRPFRGTNEADDTSEESKP 506


>gi|75052143|sp|Q588U8|CFDP2_TRAJA RecName: Full=Craniofacial development protein 2; AltName: Full=p97
           bucentaur protein
 gi|62241227|dbj|BAD93708.1| p97Bcnt [Tragulus javanicus]
          Length = 574

 Score = 58.6 bits (140), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 38/290 (13%), Positives = 70/290 (24%), Gaps = 37/290 (12%)

Query: 6   VATWNVNSIRARIHNLAAWIKEN----NPDIICLQETKTE-DKNFPFETLQSLNYHIETC 60
           + TWNV S+          +K+     N DI+ + E K         +       H    
Sbjct: 239 IGTWNVRSMN---PGKLDVVKQEMDRINIDILGISELKWTGMGELNSDD------HYIYY 289

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
             +       ++      +   + G +L                   I            
Sbjct: 290 CGQQSLRRNGVALIVNKRVQNAIIGCNLKNDRMISLRFQGKPFNLTVIQVFAPTPYAEEG 349

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
                 +       +      L +            IP     +   +        ++  
Sbjct: 350 EVYRFYEDLQHLLEITPKIDVLFIIGDWNAKVGSQEIPGITGRFGLGMQNEAGRRLIDFC 409

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
                  N            +  LY++         +     ID+I+      S + SA+
Sbjct: 410 H-----HNRLVIANTLFQQPSRRLYTWTSPDGRFRDQ-----IDYIICRQRWRSSVQSAK 459

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI----------PEPRKKQQDSTSQNMKP 280
                 G    SDH  +I    +          P     + D TS+  KP
Sbjct: 460 TRP---GADCGSDHKLLIAKFRLKLKIIPKTTRPFRGTNEADDTSEESKP 506


>gi|322797021|gb|EFZ19335.1| hypothetical protein SINV_07629 [Solenopsis invicta]
          Length = 388

 Score = 58.6 bits (140), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 45/257 (17%), Positives = 77/257 (29%), Gaps = 17/257 (6%)

Query: 16  ARIHNLAAWIKENNPDIICLQETKTEDK--NFPFETLQSLNYHIETCGQKSYNGVAILSK 73
           ARI  +A        DIICLQE  + D       +  + L Y          +G+ ILS+
Sbjct: 19  ARISAIADKCASMEYDIICLQEVWSVDDFKLIKAKAQEVLPYSHYFHSGVFGSGICILSR 78

Query: 74  YQPIEIVTHLPGDDLDVQARFIEATFTINT---QTLRIGNLYLPHGNPITSTKYDDKISW 130
           Y   +++ H    +  V        F         ++I N+ +         +Y+ +   
Sbjct: 79  YPIQDVMFHKWPLNGYVHKIHHGDWFGGKGVGLCKIKILNMNVNVYITHLHAEYNHENDE 138

Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG 190
                   +        +   G   II        P          +             
Sbjct: 139 YMAHRVLQAFDTAQFVKMTSGGADAIILAGDLNTEPQDLAYKIIQGVSGLVDTCPNSASH 198

Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI--MLSPEATSLLHSA---RIDTKP 245
                 A +     Y+       + +K  G RIDHI  + S      + +     ++  P
Sbjct: 199 IGTNECANN----SYT---SSKLAQTKPDGKRIDHIMYLGSKTVKVEVTNFQHPWLNRVP 251

Query: 246 RGWTKPSDHTPVIVSLD 262
                 SDH  V+ +L 
Sbjct: 252 YKNFSYSDHEAVMATLK 268


>gi|17545188|ref|NP_518590.1| hypothetical protein RSc0469 [Ralstonia solanacearum GMI1000]
 gi|17427479|emb|CAD13997.1| putative endonuclease/exonuclease/phosphatase protein [Ralstonia
           solanacearum GMI1000]
          Length = 248

 Score = 58.6 bits (140), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 37/276 (13%), Positives = 82/276 (29%), Gaps = 46/276 (16%)

Query: 1   MSVVTVATWNVN----SI--RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           M  + VAT+N++     I  R R+H++   +   + DI+ LQE +  +       L   +
Sbjct: 1   MLRLRVATYNIHKGVTGIARRVRVHDVRQGLHTMDADIVFLQEVQDRNDRLVAAELFDPH 60

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           Y        +         Y       +   D        +     + ++ L I +    
Sbjct: 61  Y--------TQLRYLATDVYPHTVYGRNAVYDHGHHGNAILSRYPILLSENLDISDHRFE 112

Query: 115 HGNPITSTKY--DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD---CYNPIIW 169
               + +       ++  +       ++    +   +     +++P         +   W
Sbjct: 113 QRGLLHAVADLGFGEVHLLCAHFGLFARSRRRQAEALIERVCSVVPIDAPLVVAGDFNDW 172

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
            N     +       ++ +         T  +H  +               +R+D I   
Sbjct: 173 NNRLDRVICQALGVTEVADKAAGARPLRTFPSHLPW---------------LRLDRIY-- 215

Query: 230 PEATSLLHSARIDTKP----RGWTKPSDHTPVIVSL 261
                 +    ID       R W + SDH P++  L
Sbjct: 216 ------VRGFEIDRAHALTGRDWAQRSDHVPLLAEL 245


>gi|265767745|ref|ZP_06095277.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|263252417|gb|EEZ23945.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
          Length = 678

 Score = 58.6 bits (140), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 41/284 (14%), Positives = 73/284 (25%), Gaps = 37/284 (13%)

Query: 2   SVVTVATWNVN--SI---RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56
           ++V V  WN+    I         +   I+ +  D+I +QE              SL YH
Sbjct: 409 NIVKVLQWNIWHGGIHLGNEGQQRVLDLIRSSRADVIMMQE----AYGIQQMLADSLGYH 464

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
           ++T      N                    +                  LR         
Sbjct: 465 LKT-HSLKDNLAMYSRFPLEAIAWREPFKSNPAKITLPNGKRIMFVDCWLRYAYRPEYTS 523

Query: 117 NPITSTKYDDKI----------SWIKRFLRFASQRLELEEPLIFAGDYN-IIPQPHDCYN 165
                                      + +  +  LE + P+I  GD+N           
Sbjct: 524 GYAEKGLDPSVWVAEDSILALPDIRNIYTKDIAPNLETDMPVIVTGDFNSCSHLDWTERA 583

Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG----I 221
             +      +      + + +   GF D+ R  +     Y        + +   G     
Sbjct: 584 KPLHHG---YGPVAFPASRYMLENGFKDSFREKNPDEVAY-----QGGTVAAIYGQMQMS 635

Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTK--PSDHTPVIVSLDI 263
           RID I         + S++I            SDH  V+   ++
Sbjct: 636 RIDFIYYKGGL--KVLSSKIVRTAPEIDYVWASDHAAVLTVFEV 677


>gi|87198716|ref|YP_495973.1| endonuclease/exonuclease/phosphatase [Novosphingobium
           aromaticivorans DSM 12444]
 gi|87134397|gb|ABD25139.1| Endonuclease/exonuclease/phosphatase [Novosphingobium
           aromaticivorans DSM 12444]
          Length = 245

 Score = 58.6 bits (140), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 35/271 (12%), Positives = 70/271 (25%), Gaps = 36/271 (13%)

Query: 4   VTVATWNVN---SI-RAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           + VA++N++    + R R    +   ++E + D+I LQE          +    L   + 
Sbjct: 3   LKVASYNIHKGVGLDRRRDPDRILTVLREIDADVIALQE---------ADRRFGLREAVI 53

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
                  +    + +    +             A  +     +            P G  
Sbjct: 54  PRAMLDDHSPWRVVEPGHYDRARTSSSMGWHGNALLVRRDIEVIDACAVPLPTLEPRGAV 113

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
             S +    +  +       S     ++     G        H      +   D      
Sbjct: 114 CASLRLAGHVVRVLGMHLDLSGLRRRQQIETICGHIE----DHPERGHAVLMGDFNEWSP 169

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
              +     +     A           SF      +        +D I++S      + +
Sbjct: 170 SGGALSAFADHLRVLAPGR--------SFPSRRPVAQ-------LDRIVVSDGL--HVDA 212

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIPEPRKK 269
           A +   P      SDH PV   L +P     
Sbjct: 213 AGVHHSPLAAVG-SDHLPVWAELRLPGNEAD 242


>gi|253567149|ref|ZP_04844599.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|251943980|gb|EES84499.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
          Length = 678

 Score = 58.6 bits (140), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 41/284 (14%), Positives = 74/284 (26%), Gaps = 37/284 (13%)

Query: 2   SVVTVATWNVN--SI---RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56
           ++V V  WN+    I         +   I+ +  D+I +QE              SL YH
Sbjct: 409 NIVKVLQWNIWHGGIHLGNEGQQRVLDLIRSSRADVIMMQE----AYGIQQMLADSLGYH 464

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
           ++T      N                    +                  LR         
Sbjct: 465 LKT-HSLKDNLAMYSRFPLEAIAWREPFKSNPAKITLPNGKRIMFVDCWLRYAYRPEYTS 523

Query: 117 NPITSTKYDDKI----------SWIKRFLRFASQRLELEEPLIFAGDYN-IIPQPHDCYN 165
                                      + +  +  LE + P+I  GD+N           
Sbjct: 524 GYAEKGLDPSVWVAEDSILALPDIRNIYTKDIAPNLETDMPVIVTGDFNSCSHLDWTERA 583

Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG----I 221
             +      +      + + +   GF D+ R  +    +Y        + +   G     
Sbjct: 584 KPLHHG---YGPVAFPASRYMLENGFKDSFREKNPDEVVY-----QGGTVAAIYGQMQMS 635

Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTK--PSDHTPVIVSLDI 263
           RID I         + S++I            SDH  V+   ++
Sbjct: 636 RIDFIYYKGGL--KVLSSKIVRTAPEIDYVWASDHAAVLTVFEV 677


>gi|327271381|ref|XP_003220466.1| PREDICTED: sphingomyelin phosphodiesterase 2-like [Anolis
           carolinensis]
          Length = 409

 Score = 58.6 bits (140), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 38/293 (12%), Positives = 81/293 (27%), Gaps = 37/293 (12%)

Query: 4   VTVATWNVNSIR-------ARIHNLAAWIKENNPDIICLQETKTEDK--NFPFETLQSLN 54
           + +   N   IR        R+  +   + +   D++ LQE  +E        +      
Sbjct: 9   LRIFDLNCWGIRYISKLQQERVELIGDVLNQEGFDLVLLQEVWSEKDYWELKKKLCTCYP 68

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI------ 108
                      +GV + SK+Q ++   H    +           F   +  L +      
Sbjct: 69  SSYYFKSGVIGSGVCVFSKHQILDTFQHQYSVNGYPYMFQHGDWFGGKSVGLVVLKIKGI 128

Query: 109 -----GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                        +         ++       +F     +  + ++  GD N+ P+    
Sbjct: 129 VFNIYVTHLHAEYSREKDYYLSHRVVQAWELAQFIQHTCKGADVVLLGGDLNMHPEDVVV 188

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223
                W       +   +            A   T+               +   +GIRI
Sbjct: 189 RLLQGWVGLQDSFITAEKVEGCEDGCTLVPANCFTNKKEL---------QCFP--QGIRI 237

Query: 224 DHIMLSPEATSLLHSARID-----TKPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271
           D+I+     +                P      SDH  V+V+L + + +  ++
Sbjct: 238 DYILY-KGLSQYEIRCNSHETTTGKAPNKDIPYSDHEAVMVTLSVAKKQSDEE 289


>gi|326798228|ref|YP_004316047.1| endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21]
 gi|326548992|gb|ADZ77377.1| Endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21]
          Length = 282

 Score = 58.6 bits (140), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 42/270 (15%), Positives = 83/270 (30%), Gaps = 22/270 (8%)

Query: 4   VTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQE-TKTEDKNFPFETLQSL 53
           + VAT+NV         N    R   +AA I  ++ DI   QE  K +  +      +  
Sbjct: 24  LRVATFNVRYANPGDTGNLWEDRAPVVAALIDFHDFDIFGTQEALKRQLDDISAALPEYQ 83

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
            Y +     +     + +   +    +       L          +   +   RI +   
Sbjct: 84  RYGLGRDDGQEGGEHSAIYFKKDRFFLLKKGDFWLSETPDKPSFGWDAKSHK-RICSWIQ 142

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
                     +     +  + ++   +  +L    I         +      P I+  D 
Sbjct: 143 LRDKKSKREFFVFNAHYDHQGIQARKESSKLILNKI---------KEIAQGAPTIFTGDM 193

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
             + E        Q+    D  +     +   + ++ + +  S      IDHI ++ +  
Sbjct: 194 NGSEETEWYQALAQSALLKDTQKLVAKPYKPNASFNGFGNEKSLQATAIIDHIFVTKDF- 252

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                  + T       PSDH PV+V L+I
Sbjct: 253 -KALKWGVLTDTYHGKFPSDHFPVMVDLEI 281


>gi|307128824|ref|YP_003880840.1| metal-dependent hydrolase [Dickeya dadantii 3937]
 gi|306526353|gb|ADM96283.1| Metal-dependent hydrolase [Dickeya dadantii 3937]
          Length = 287

 Score = 58.6 bits (140), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 40/294 (13%), Positives = 80/294 (27%), Gaps = 44/294 (14%)

Query: 4   VTVATWNVN-SI----RARIHNLAAWIKENNPDIICLQET-----KTEDKNFPFETLQSL 53
           + + ++N+   +    R  +  +A  ++    DIIC+QE      ++   + P E    L
Sbjct: 1   MHIVSYNIQYGLGRDGRYDLARIADEVR--GADIICMQEVERFWQRSGMMDQPAELAALL 58

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
             +    G       + +S    +       G     +   + +      +   +    +
Sbjct: 59  GEYHWVYGANLDMDASTVSADGRVVNRRRQFGTLTLSRRPILSSRNFPLPKFGTLTQHSI 118

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
             G   T          I                +                      + +
Sbjct: 119 QQGVLETVIDTGAGAIRIYNTHLSHLCAGTRLPQVEAMLALFARAPDEGGAWCGGHPDPS 178

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF----WDYYADSWSKNKGI-------- 221
               E R     L+ +   D           YS        +     +++G+        
Sbjct: 179 AGWTEGRMPLMPLEMILMGDL--NCLPDSEEYSRLVGPVSPHHGRLVRHRGLMDAWVAAG 236

Query: 222 --------------RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
                         RIDH +L+P     +     DT+ +G    SDH P+ V L
Sbjct: 237 QPESSGSTHPSVGGRIDHCLLTPSLGLTVRRCWADTENQG----SDHHPLWVEL 286


>gi|313204713|ref|YP_004043370.1| endonuclease/exonuclease/phosphatase [Paludibacter propionicigenes
           WB4]
 gi|312444029|gb|ADQ80385.1| Endonuclease/exonuclease/phosphatase [Paludibacter propionicigenes
           WB4]
          Length = 289

 Score = 58.6 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 43/281 (15%), Positives = 87/281 (30%), Gaps = 47/281 (16%)

Query: 4   VTVATWNVN-------SIRARIHN---LAAWIKENNPDIICLQET--KTEDKNFPFETLQ 51
           +T+AT+N+          R+ ++    +A  IK+ + DI  +QE   K ++ +     + 
Sbjct: 27  LTIATYNIRLQTPVDSGARSWVNRKADVARVIKKYDFDIFGVQEVGNKNQEADL-KALIP 85

Query: 52  SLNYHIE--TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI----NTQT 105
              Y  +       +      L       +        L      +   +          
Sbjct: 86  DYTYFGKGRDNQVGTDGEQIGLFYKTKRFLAKEKGSFFLSETPEVMSKGWDAAYRRMCVW 145

Query: 106 LRIGNLYLPHGNPITSTKYDDK----ISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161
           +R  +        +  + +D           R +    +++   +P++F GD N  P   
Sbjct: 146 IRFQDAETKSEFFVFCSHFDHMGVKARVESARLIEQQVKKIAAGKPVLFLGDLNTAPDET 205

Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI 221
           D Y  +    D    +  + +   +      D  +                         
Sbjct: 206 DMYKILHATFDDSREISAKPAIGSVGTFNNYDVSKMMLPVSE------------------ 247

Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTK--PSDHTPVIVS 260
           RID+I         + S R+ +  R   K  PSDH PV++ 
Sbjct: 248 RIDYIFCKK---IKVFSYRVISD-RFSEKTYPSDHFPVMIE 284


>gi|68473302|ref|XP_719209.1| potential rRNA 3' end processing RNAse Ngl2p [Candida albicans
           SC5314]
 gi|46441016|gb|EAL00316.1| potential rRNA 3' end processing RNAse Ngl2p [Candida albicans
           SC5314]
          Length = 519

 Score = 58.6 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/177 (12%), Positives = 53/177 (29%), Gaps = 23/177 (12%)

Query: 1   MSVVTVATWNV-------------NS------IRARIHNLAAWIKENNPDIICLQET-KT 40
           +  + + ++N+             N       +R++I  L   +K  N DI+CLQE  K 
Sbjct: 112 LPSIKIMSYNILAQTLIRREIYPTNGKILKWSVRSQI--LLDELKHYNADIMCLQEVDKV 169

Query: 41  EDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT 100
           + + F    L+ L Y        + N   ++     +    H     LD       +  +
Sbjct: 170 QYEGFWVSQLEKLGYSTRFYRNNTKNHGCVIVFRDKLFTCKHQSFIRLDQDLNQEASEKS 229

Query: 101 INTQTL-RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI 156
           +    +      ++ +    ++   +             +  L       +      
Sbjct: 230 LPPARIATTNIAFMAYLEFTSTFIKEYPCLEETNGFIIGTTHLFWHPFGTYERARQT 286


>gi|290993412|ref|XP_002679327.1| predicted protein [Naegleria gruberi]
 gi|284092943|gb|EFC46583.1| predicted protein [Naegleria gruberi]
          Length = 332

 Score = 58.6 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 55/315 (17%), Positives = 89/315 (28%), Gaps = 67/315 (21%)

Query: 2   SVVTVATWNVNSIRARIHNL-------AAWIKENNPDIICLQETKT-------------- 40
           S + +  +NVN + A    L          +  +  D+ICLQET                
Sbjct: 22  SYLKILNYNVNFVYATKSKLESNALFVFHALFRSEADVICLQETHAGYESAFKQIKWKDV 81

Query: 41  ----------EDKNFPFET-LQSLNYHIETCGQKSYNGVAILSKYQPI------------ 77
                      D+ F  E  L SL  H       +  G+A LSKY+ +            
Sbjct: 82  RNLDQNLNGNLDEKFKEEQSLISLYPHYVFYNHGAAGGMAFLSKYEFLENSQITLATNAK 141

Query: 78  -----EIVTHLPGDDLDVQARFIEATFTINTQT--LRIGNLYLPHGNPITSTKYDDKISW 130
                ++V         +  +  E T     Q   + +      + +   S       + 
Sbjct: 142 DQYGKKVVDGSWFPMHLITVKVPEKTTGNVKQVLLVNVHLRPPLNDDGSASLWTARMTNV 201

Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG 190
            +               +I  G+          YN    +    F          L    
Sbjct: 202 YRLNEIKYLYNYLEGIGIISFGNTTCPIVILGDYNEHDNDPSCEFLKLSNLFQDALNEFV 261

Query: 191 FTDAIRATHDTH---HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRG 247
             +             LY++W      W K    R+DH + S +    L    ID     
Sbjct: 262 PQNRETHRWPLKFVWGLYTYW------WHK----RLDHCVYSKQFFKCLDCKVIDGYEMN 311

Query: 248 WTKPSDHTPVIVSLD 262
               SDH PV+ +L+
Sbjct: 312 ---ASDHQPVLTTLE 323


>gi|189236489|ref|XP_975064.2| PREDICTED: similar to neutral Sphingomyelinase, putative [Tribolium
           castaneum]
 gi|270005347|gb|EFA01795.1| hypothetical protein TcasGA2_TC007396 [Tribolium castaneum]
          Length = 393

 Score = 58.6 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 45/279 (16%), Positives = 80/279 (28%), Gaps = 30/279 (10%)

Query: 5   TVATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKT-EDKNFPFETLQS-LNY 55
            V T N   +       R R+  +A  +  +  D++CLQE     D       +   L Y
Sbjct: 4   KVFTLNCWGLAVVSKNRRHRMQAIAEKLATSQYDVVCLQEIWLDSDYQLIRNKVSGVLPY 63

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT---QTLRIGNLY 112
                   + +GV ILS++   ++  H    +  +        F         L++ N  
Sbjct: 64  SHYFYSGVTGSGVCILSRHPMEDVFFHQWPVNGYIHKIHHGDWFGGKGVGLCKLKVNNYT 123

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
           +   +     +YD      +      S        +       ++        P      
Sbjct: 124 VNVYSAHLHAEYDRNCDEYQAHRVLQSFDTAQFIQMTSGDADLVVLAGDLNTEPGDLAYR 183

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
              ++               + +       + Y+     A       G RID+IM  P  
Sbjct: 184 IMLSVPGLVDAFGEAGETVQNCVATNESLTNSYT---PVALLKKNIPGKRIDYIMYHPG- 239

Query: 233 TSLLHSARIDTKPRGWTKP----------SDHTPVIVSL 261
                S +ID K      P          SDH  +  +L
Sbjct: 240 ----SSLQIDLKSYTLPLPHKIPGCAYSYSDHEAIAATL 274


>gi|308464812|ref|XP_003094670.1| hypothetical protein CRE_25821 [Caenorhabditis remanei]
 gi|308247067|gb|EFO91019.1| hypothetical protein CRE_25821 [Caenorhabditis remanei]
          Length = 445

 Score = 58.3 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/285 (13%), Positives = 76/285 (26%), Gaps = 24/285 (8%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDK--NFPFETLQSLNYHIETCGQKSYNGVAILSKY 74
           R+  +  ++ E   DI+ LQE  +         +      Y        + +GV + S++
Sbjct: 68  RLSKIGEYMIEELYDIVGLQELWSYHDFVKLSEQCSSVYPYFHYFHSGFTGSGVCVFSRH 127

Query: 75  QPIEIVTHLPGDDLDVQARFIEATFTINTQTLR------------IGNLYLPHGNPITST 122
             +  +T     +           F      L                      +     
Sbjct: 128 PIVSTLTSRYSLNGFAHHIHRGDWFGGKVVGLTEVEIDGDLRVNFYTTHLHAEYDRENDL 187

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN---PIIWENDACFTLEV 179
               + S      +F        + +I  GD N+ P               +    + EV
Sbjct: 188 YLPHRTSQSFELAQFVRHTSRSADVVIVTGDLNMEPCDLGFRMILSHAKLFDAWRMSHEV 247

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD----SWSKNKGIRIDHIML-SPEATS 234
                    +     I          + +   A     S  K++  RID+I+  S     
Sbjct: 248 ENDEADGGELLKYRGIAKGGTCDRPDNCYTKRALKLAVSAKKDESKRIDYILFKSGRCNV 307

Query: 235 LLHSARI-DTKPRGWT-KPSDHTPVIVSLDIPEPRKKQQDSTSQN 277
            L    I   +  G     SDH  +     I +  + ++   +  
Sbjct: 308 KLEECEITLNQIPGEQMNYSDHVGLRARFTIDDRFRHERSVNTWE 352


>gi|257468819|ref|ZP_05632913.1| endonuclease/exonuclease/phosphatase [Fusobacterium ulcerans ATCC
           49185]
 gi|317063071|ref|ZP_07927556.1| endonuclease/exonuclease/phosphatase [Fusobacterium ulcerans ATCC
           49185]
 gi|313688747|gb|EFS25582.1| endonuclease/exonuclease/phosphatase [Fusobacterium ulcerans ATCC
           49185]
          Length = 285

 Score = 58.3 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 41/276 (14%), Positives = 76/276 (27%), Gaps = 44/276 (15%)

Query: 4   VTVATWNV----NSIRARIHNLAAWIKENNPDIICLQET--------KTEDKNFPFETLQ 51
           + + T+N+    N+ +  +   A  IK+ NPDI+ +QE         K +      +   
Sbjct: 35  MKIMTYNIAAGANNFKVDLKVTAETIKKVNPDIVAIQEVDRNTNRSGKIDQAQILADL-- 92

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
              Y++       ++G            +       L       + T     Q + +   
Sbjct: 93  -TGYNMVFGKTIDHDGGDYGIAILSKHPILSQQSLILPSFPN-GDTTSPGYEQRIALITQ 150

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
               G  +  T  +  + W +       Q   + E  +      I+    +        N
Sbjct: 151 IEVPGFEVPITFINTHLDWHEDPAVRLQQIRTINEITLDMRGIKILAGDFNDTV-----N 205

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
                   R       +        A +                       ID I L+  
Sbjct: 206 SVIGKEMERYWVSVFDDKIDHRTWPAVNPEVA-------------------IDQIYLNKA 246

Query: 232 ATSLLHSARIDTKPRG----WTKPSDHTPVIVSLDI 263
                 +   + +       W K SDH PVIV L +
Sbjct: 247 QVWEAKTYVPNKENEKDGIQWNKVSDHIPVIVDLKL 282


>gi|41409338|ref|NP_962174.1| hypothetical protein MAP3240 [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41398158|gb|AAS05788.1| hypothetical protein MAP_3240 [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 260

 Score = 58.3 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/270 (12%), Positives = 77/270 (28%), Gaps = 31/270 (11%)

Query: 4   VTVATWNV-------NSIRARIHNLAAWIKENNPDIICLQET-----KTEDKNFPFETLQ 51
           + VAT+N+       + +   +  L   I+  +PD++ LQE      ++E  +      +
Sbjct: 7   MRVATFNILHGRTVCDGVN--VERLRDCIRRLDPDVLSLQEVDCDQPRSEHADLTGAAAE 64

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
           ++         +    ++       +                 +      + Q LR+  +
Sbjct: 65  AMG----AVEHRFVAAISGTPGATWMAATGDEQPGTAAYGIALLSRYPVASWQVLRLPRI 120

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
            +     +        +    R    A  R  + E  +     + +P  +      +  +
Sbjct: 121 PMRFPMYLPGPNRVMIVDEEPRAAVIAQLRTPIGELTVANTHLSFVPGWNRRQLRRLIRD 180

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
                     +                    +  +F        + N   ++DHI+    
Sbjct: 181 LRGLPGPRLLTGDLNMTPQTVRRWSGMRALGNAKTFP-------ADNPNRQLDHILTDDR 233

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
               L  A +          SDH P++V L
Sbjct: 234 ---RLRCAAVQADLM---PISDHRPLVVDL 257


>gi|84500561|ref|ZP_00998810.1| hypothetical protein OB2597_11401 [Oceanicola batsensis HTCC2597]
 gi|84391514|gb|EAQ03846.1| hypothetical protein OB2597_11401 [Oceanicola batsensis HTCC2597]
          Length = 266

 Score = 58.3 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/277 (12%), Positives = 65/277 (23%), Gaps = 33/277 (11%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNF-PFETLQSLNYHIETCGQ 62
           + + + N    R     + AWI E  PDI+CLQET      F P      L+Y       
Sbjct: 1   MRIVSLNAWGGRL-FEEMVAWIAEVQPDILCLQET-----VFAPGSPSAWLDYRDGDTVL 54

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
                V         +                     ++      +    +  G      
Sbjct: 55  PQRADVLRDVSRALPDHGMSFCPAACGNLWLGNREVPSLWGLATFLHPDLMIVGQSQGFV 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                        R  +  +         G   +             +         + +
Sbjct: 115 HGAFSPDGFGDHPRSRTAHVVRVWHPDE-GGITVGHMHGLRDPNGKMDTPVRGEQARKFA 173

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW--SKNK-------GIRI---------- 223
                 +   D + A  D + L     +   +     N        G R           
Sbjct: 174 TMVQSVLQPGDPVVACGDFNVLPGSETFRVMARVAPYNLVTQRGFDGTRTSHYEKPERWA 233

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
           D+++++                R     SDH P+++ 
Sbjct: 234 DYMLVNGPLKDAAFDV-----IRTPEI-SDHCPLVLD 264


>gi|302784148|ref|XP_002973846.1| hypothetical protein SELMODRAFT_414230 [Selaginella moellendorffii]
 gi|300158178|gb|EFJ24801.1| hypothetical protein SELMODRAFT_414230 [Selaginella moellendorffii]
          Length = 471

 Score = 58.3 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/249 (10%), Positives = 59/249 (23%), Gaps = 31/249 (12%)

Query: 21  LAAWIKENNPDIICLQETKTEDKN-----FPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75
           +   ++++  D+I LQE + E++              ++Y         +    +     
Sbjct: 243 VFEVLRDSKADLIALQEVRAEEEKGMSPLTDLAEALGMHYAYAESWAPEFGNAILSRNLL 302

Query: 76  PIEIV---THLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIK 132
            + +                   E         +      +PH         +      +
Sbjct: 303 KVVVDVPSFGEVCYCCTHLDHLDEDWRIKQVSAILEDTKKVPHFLAGDLNSLNRPDYSQE 362

Query: 133 RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192
           R+   A      +   + A +  + P+       ++ +               L      
Sbjct: 363 RWAEIAKASSFFQACQLRAENRKMAPRSDVMERLLVEKGYMDSCAVASPEIPALVRGQEI 422

Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPS 252
                 +                      RID+I+ SP             K       S
Sbjct: 423 QGTCKHNT---------------------RIDYILASPHLQYRFIPGS--YKVVSSRGTS 459

Query: 253 DHTPVIVSL 261
           DH  V V +
Sbjct: 460 DHHLVTVDI 468


>gi|319944727|ref|ZP_08018991.1| endonuclease/exonuclease/phosphatase [Lautropia mirabilis ATCC
           51599]
 gi|319741976|gb|EFV94399.1| endonuclease/exonuclease/phosphatase [Lautropia mirabilis ATCC
           51599]
          Length = 253

 Score = 58.3 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/274 (11%), Positives = 69/274 (25%), Gaps = 43/274 (15%)

Query: 4   VTVATWNVN-------SIRAR--IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ--- 51
           + VAT+N++       S+R R  +  +   + E   D++ LQE + ++  F     Q   
Sbjct: 6   LRVATYNIHKGVVPGPSLRRRPMVKEMRQRLHELQADVVFLQEVQGQNNRFAKRFAQWPA 65

Query: 52  --SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
                Y                   + +                     F+ +    R  
Sbjct: 66  DPQAQYLALDPESSRRFQAVYGLNARYLHGHHGNALLSQFPILSIENRDFSDHVFERRGV 125

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
              +          +        R     +  L             + P           
Sbjct: 126 LHCVLQMGERAVHCFVIHFGLFARSRARQAGALIDWI------RAEVPPGAPLLIAGDFN 179

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
           +     +  + +     + +       A                       +R+D I + 
Sbjct: 180 DWQDALSRLLVERLGVYEVLDSARTFPALMPC-------------------LRMDRIYV- 219

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                 + +A++      W + SDH PV+  L +
Sbjct: 220 RGFA--VETAQVLRG-LSWARLSDHAPVVADLTL 250


>gi|197105800|ref|YP_002131177.1| hypothetical protein PHZ_c2338 [Phenylobacterium zucineum HLK1]
 gi|196479220|gb|ACG78748.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
          Length = 243

 Score = 58.3 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 47/274 (17%), Positives = 84/274 (30%), Gaps = 49/274 (17%)

Query: 5   TVATWNV-----NSIRARIHNLAAWIKENNPDIICLQET-----KTEDKNFPFETLQSL- 53
            + T+NV     N  R  +  +AA +   NPDI+ LQE      +T   +   E  + L 
Sbjct: 3   RIVTYNVHRCVGNDRRLDVSRIAAVLAALNPDIVALQELDVGRRRTNYADQAHEIAEQLE 62

Query: 54  ---NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
              ++H     ++   G AIL+ Y    +          ++A        +    + IG 
Sbjct: 63  MACHFHAALQVEEERYGDAILTAYPERLVKVGPLPGYDRMRALEPRGALWVE---VEIGG 119

Query: 111 LYLPHGN-PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
             +   N  +     + +I              +   P I  GD+N              
Sbjct: 120 KPVQIINTHLGLIPREQQIQAAHLAGTTWLDHPDCRWPAILLGDFNATATSVVYRTLTAR 179

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
                       + +  +    T    +                       +RIDH+ +S
Sbjct: 180 LK---------AARRLTRRRTATSTFPSPLPV-------------------LRIDHVFVS 211

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           P     +H       P      SDH P+++  D+
Sbjct: 212 PGIE--VHDVFAPFDPLTRV-ASDHLPLVMDFDV 242


>gi|313159826|gb|EFR59182.1| endonuclease/exonuclease/phosphatase family protein [Alistipes sp.
           HGB5]
          Length = 326

 Score = 58.3 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 48/299 (16%), Positives = 85/299 (28%), Gaps = 44/299 (14%)

Query: 4   VTVATWNV-NSIRA----RIHNLAAWIKENNPDI--ICLQE------------TKTEDKN 44
           + +  WN+ N + +           W+   NPD+   C  E             K E+  
Sbjct: 32  LRLLYWNIQNGMWSGQGDNYTRFVNWVSAQNPDVCVWC--ESVTNYKTASDEKIKPEEAY 89

Query: 45  FPF---ETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLD----VQARFIEA 97
            P    E  +   +     G    N   +++   PIE V  L G   D      A + + 
Sbjct: 90  LPEHWGELARRYGHEYWYKGGHRDNFPQVITSKYPIENVARLIGAVPDSIVSHGAGWAQI 149

Query: 98  TFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII 157
               +T  +   + +        + K + K S   R      +           G     
Sbjct: 150 RKNGHTVNIVSLHTWPQVYGFGLADKLERKASAAAREGDRFRRMEIEYVCNHTIGSVAGA 209

Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK 217
            +                  E     +        D I        + +    Y   +  
Sbjct: 210 EKQLWMMMGDFNSKSRVDNYE-YGFPEDTTAFLVHDYICQHTPYVDVIA--AKYPGEFQT 266

Query: 218 NKGIR--IDHIMLSPEATSLLHSARIDTKP-----------RGWTKPSDHTPVIVSLDI 263
             G R  ID++  +      + SAR+ +             R +  PSDH P+I+  D+
Sbjct: 267 TTGRRFRIDYVYCTRPLYDRIVSARVVSDEYTTPVRDPQELRNFWHPSDHRPIIIDFDM 325


>gi|315607053|ref|ZP_07882057.1| AP endonuclease domain protein [Prevotella buccae ATCC 33574]
 gi|315251107|gb|EFU31092.1| AP endonuclease domain protein [Prevotella buccae ATCC 33574]
          Length = 365

 Score = 58.3 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 42/277 (15%), Positives = 80/277 (28%), Gaps = 41/277 (14%)

Query: 2   SVVTVATWNVNSIRARIHN--------LAAWIKENNPDIICLQE-----TKTEDKNFPFE 48
           S + V ++NV +    +          + +++  +  DIICLQE      K E       
Sbjct: 99  STLKVLSFNVQNFGYSVDGSPGDGPNPIVSYLARSKADIICLQEANGQVIKAE---LDSV 155

Query: 49  TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108
             +  ++H E     S + + + S++    +         ++   ++      +   +  
Sbjct: 156 MGRLYSHHSEELKDSSGDMLRLYSRFPIKRVERIHYQSYGNLSVAYVLDVNGEDVLVVN- 214

Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168
            +L     NP     + + +           +   L + L  A                 
Sbjct: 215 NHLESNLLNPTDKAGFKNLVKGELGRHEARQESTHLIDKLAAASRKRAPQVDSVAAYVAR 274

Query: 169 WENDAC------FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI- 221
                       F                TD   +  +       W Y+        G+ 
Sbjct: 275 HIGRMPVILCGDFNESPISYAHYRMENLLTDCYVSAGNGPG----WSYHR------SGMY 324

Query: 222 -RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257
            RID+I  S          R+D K     K SDH P+
Sbjct: 325 VRIDNIFCSDNWKPY--QCRVDDKI----KESDHYPI 355


>gi|295088164|emb|CBK69687.1| Metal-dependent hydrolase [Bacteroides xylanisolvens XB1A]
          Length = 316

 Score = 58.3 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/302 (15%), Positives = 88/302 (29%), Gaps = 45/302 (14%)

Query: 2   SVVTVATWNV-----------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETL 50
           + +TVA++N+           N    R   +A  ++ ++ DI   QE          E L
Sbjct: 26  TSITVASYNLRNANGGDSINGNGWGQRYPVIAQIVQYHDFDIFGTQECFIHQLKDMKEAL 85

Query: 51  QSLNY-HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
            S +Y  +     K     + +        V       L          +      +   
Sbjct: 86  PSYDYIGVGRDDGKEKGEHSAIFYRTDKFDVIEKGDFWLSETPDVPSKGWDAVLPRICSW 145

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
             +           ++  +  I +  R  S  L  ++         +             
Sbjct: 146 GHFKCKDTGFEFLFFNLHMDHIGKKARVESAFLVQDKMKELGKGKELP----AILTGDFN 201

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
            +    + +   S   L +       R   +     +F D+  +S+++    RIDH+ +S
Sbjct: 202 VDQTHQSYDAFVSKGVLCDSYEKAGFRYAING----TFNDFDPNSFTE---SRIDHVFVS 254

Query: 230 PEA--------------------TSLLHSA--RIDTKPRGWTKPSDHTPVIVSLDIPEPR 267
           P                          +     ID K      PSDH PV V L+  + +
Sbjct: 255 PSFHVKKYGVLTDTYRSIVGKGEKKQANDCPEEIDIKTYQARTPSDHFPVKVELEFEQRQ 314

Query: 268 KK 269
           +K
Sbjct: 315 QK 316


>gi|78046289|ref|YP_362464.1| putative secreted protein [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|78034719|emb|CAJ22364.1| putative secreted protein [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 287

 Score = 58.3 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/271 (13%), Positives = 72/271 (26%), Gaps = 28/271 (10%)

Query: 4   VTVATWNV------NS---IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           + V ++NV      +     + R   + A IK+ +PD+   QE  +E   F  E L    
Sbjct: 34  LRVMSFNVRVPADTDGDKRWQVRRAAMVALIKQTHPDVFGTQELVSEQAAFLAEQLPDYR 93

Query: 55  YHIETCGQKSYNGVA-ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
           +  +       +    +    + +++V        D   R    T+      +    L+ 
Sbjct: 94  WFGQGRRGDDSDEHMGVFYDARVLQVVESGNFWLSDTPERAGSITWGNVLPRMATWALFE 153

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
              +      ++    +         +        +       +P          + +D 
Sbjct: 154 RRSDKSRFYLFNTHFPYRDEDEPARERSAR-----LILSRIAQLPATVPVVLTGDFNSDP 208

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
                   +                 +T   ++               RID I+      
Sbjct: 209 DKITYPTLTAVLRDARAQASKRSGPENTFQDFTTHPTR----------RIDWILY-RGLR 257

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
                        G   PSDH PV+   D P
Sbjct: 258 P--TRFATLDDRPGGILPSDHYPVMAEFDWP 286


>gi|168698628|ref|ZP_02730905.1| hypothetical protein GobsU_03844 [Gemmata obscuriglobus UQM 2246]
          Length = 290

 Score = 58.3 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 44/269 (16%), Positives = 81/269 (30%), Gaps = 18/269 (6%)

Query: 4   VTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           V V ++N+         N    R   LA  +K   PD++  QET    ++F  + L    
Sbjct: 27  VRVMSFNIRYGTAKDGENHWDKRKEFLADTVKAFGPDLLGTQETLIFQRDFLSQKLTGYE 86

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
                       G      ++         G     +   +  + + ++   R+      
Sbjct: 87  GLGVGREDGKEKGETTALYWRKARFEKTDGGHFWLSETPNVAGSKSWDSSLPRMATWVKL 146

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
                 + K    ++     +   ++    +      G                   +  
Sbjct: 147 KDLAKPNAKPVLFVNTHFDHIGKKARIEGAKLIRDRIGALGAGCS--VVVTGDFNSGEDS 204

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLY--SFWDYYADSWSKNKGIRIDHIMLSPEA 232
                  + +        D+ RA H        +F ++ A      KG RID I +S + 
Sbjct: 205 EPYRTLFAARDKNESPVMDSFRAAHPKREPNEGTFTNFKAGPV---KGDRIDWIGVSRDW 261

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           T  +  A ID   +    PSDH PV  +L
Sbjct: 262 T--VTGAGIDRTEKDGRTPSDHFPVTATL 288


>gi|288926930|ref|ZP_06420828.1| AP endonuclease domain protein [Prevotella buccae D17]
 gi|288336289|gb|EFC74672.1| AP endonuclease domain protein [Prevotella buccae D17]
          Length = 365

 Score = 58.3 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 44/279 (15%), Positives = 81/279 (29%), Gaps = 45/279 (16%)

Query: 2   SVVTVATWNV-N-SIRARIHN--------LAAWIKENNPDIICLQE-----TKTEDKNFP 46
           S + V ++NV N    A            + +++  +  DIICLQE      K E     
Sbjct: 99  STLKVLSFNVQNFGYSA--DGSPGDGPNPIVSYLARSKADIICLQEANGQVIKAE---LD 153

Query: 47  FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
               +  ++H E     S + + + S++    +         ++   ++      +   +
Sbjct: 154 SVMGRLYSHHSEELKDSSGDMLRLYSRFPIKRVERIHYQSYGNLSVAYVLDVNGEDVLVV 213

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
              +L     NP     + + +           +   L + L  A               
Sbjct: 214 N-NHLESNLLNPTDKAGFKNLVKGELGRHEARQESTHLIDKLAAASRKRAPQVDSVAAYV 272

Query: 167 IIWENDAC------FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG 220
                         F                TD   +  +       W Y+        G
Sbjct: 273 ARHIGRMPVILCGDFNESPISYAHYRMENLLTDCYVSAGNGPG----WSYHR------SG 322

Query: 221 I--RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257
           +  RID+I  S +        R+D K     K SDH P+
Sbjct: 323 MYVRIDNIFCSDDWKPY--QCRVDDKI----KESDHYPI 355


>gi|311032107|ref|ZP_07710197.1| endonuclease/exonuclease/phosphatase [Bacillus sp. m3-13]
          Length = 264

 Score = 58.3 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 43/284 (15%), Positives = 77/284 (27%), Gaps = 44/284 (15%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQE---------TKTEDKN----- 44
           + + T N +S +      +I ++A  IKE   D+I LQE          K   K      
Sbjct: 1   MKLLTLNCHSWQEENQMEKIQHIARAIKEQAYDVIALQEVSQSIDAQVVKGNIKQNNFGL 60

Query: 45  FPFETLQSLN---YHIETCGQKSYNGVA--ILSKYQPIEIVTHLPGDDLDVQARFIEATF 99
              + L+ L    Y +               L+      I                  T 
Sbjct: 61  VLQQELEKLGVSDYELVWDFAHMGYDTFEEGLAILTRHSIKKTHSFFVSKSTDSDFWKTR 120

Query: 100 TINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159
            I   T+ +    +           D++     +  +   +    E   +     N    
Sbjct: 121 KIVGVTVEVQGEEMSFYTCHLGWWSDEEEPAKYQMKQLIEKVKGTEPYFLLGDFNNSAHI 180

Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK 219
             + Y  +                  L        +            WD         +
Sbjct: 181 KGEGYEFLTST--------AGLHDTYLLASEKDSGVTVEGKIAG----WD------ENKQ 222

Query: 220 GIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            +RID I+ S      + S+++    +     SDH  V V+L+I
Sbjct: 223 DLRIDLILASSP--PSVTSSKVVFNGQNREVVSDHYGVEVTLEI 264


>gi|213403402|ref|XP_002172473.1| inositol phosphosphingolipids phospholipase C [Schizosaccharomyces
           japonicus yFS275]
 gi|212000520|gb|EEB06180.1| inositol phosphosphingolipids phospholipase C [Schizosaccharomyces
           japonicus yFS275]
          Length = 427

 Score = 58.3 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 43/308 (13%), Positives = 95/308 (30%), Gaps = 39/308 (12%)

Query: 4   VTVATWNVNSIR-------ARIHNLAAWIKENNPDIICLQETK----------TEDKNFP 46
           + V ++N   +R        R+H +   + E + DI+ LQE            +  +N P
Sbjct: 9   IKVLSFNCWGLRFVSKYRTERLHAIGVKLSECDYDIVLLQEVWSINDYHSIQNSTRENLP 68

Query: 47  FETL---QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
           +       ++   +    +       +              GD    +     +    + 
Sbjct: 69  YSRFYHSAAMGAGLAVLSRYPIVETTMNKYPLNGRPQAFWRGDWYVGKGVATASLQHPSG 128

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF-ASQRLELEEPLIFAGDYNIIPQPHD 162
           + + + + +L          Y         ++       ++    ++ AGD+N  P    
Sbjct: 129 KIISVFDTHLHAPYGKGEDTYLCHRMAQAWYISKLIRAAVQRGHIVLAAGDFNFQPLTEP 188

Query: 163 CYNPIIW------ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS 216
                 +                    +   +      I       HL ++    A+   
Sbjct: 189 HNIITSYGLVSDSWLSVHPDQYKNAPSRFTLSDQELIDILGVTCDSHLNTW---RANVSD 245

Query: 217 KN----KGIRIDHIMLSPEATSLLHSARIDTK--PRGWTKPSDHTPVIVSLDIPEPRKKQ 270
           K+       R+D++  SP  T  + S  + T+  P+     SDH  + V L++   +KK 
Sbjct: 246 KDMDDYVAKRLDYVFHSPNNTDAVSSKVVFTEHVPKLDCSYSDHFAIEVVLEL---KKKP 302

Query: 271 QDSTSQNM 278
            + T   +
Sbjct: 303 TEVTKTRL 310


>gi|303288135|ref|XP_003063356.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226455188|gb|EEH52492.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 573

 Score = 58.3 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 27/69 (39%), Gaps = 4/69 (5%)

Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253
             R    T   ++ W   + +   N G RID   +     + +H   I  +  G    SD
Sbjct: 297 DARRYPKTSDAFTCWHVASGAQLTNYGARIDAFYVDEATHARVHRVGIAREHPG----SD 352

Query: 254 HTPVIVSLD 262
           H PV ++ D
Sbjct: 353 HAPVFLAFD 361


>gi|325981641|ref|YP_004294043.1| endonuclease/exonuclease/phosphatase [Nitrosomonas sp. AL212]
 gi|325531160|gb|ADZ25881.1| Endonuclease/exonuclease/phosphatase [Nitrosomonas sp. AL212]
          Length = 283

 Score = 58.3 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/287 (11%), Positives = 71/287 (24%), Gaps = 34/287 (11%)

Query: 4   VTVATWNV------NSIRARIHNLAAWIKEN-NPDIICLQETKTE---------DKNFPF 47
           + + +WN+      +  R  +  +   I++    D+ICLQE             +     
Sbjct: 1   MKLLSWNIQWGRGMDG-RVDLARIIRTIRQIGEFDVICLQEVAVNFPGLPGSRGENQVDE 59

Query: 48  ETLQSLNYHIETCGQKS-YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
            + Q   Y           + +   S++          G        +     T + Q +
Sbjct: 60  LSAQLPGYTAIYGAATDVPDSLGGRSQFGNAIFTRLPVGQIWRHLLPWQAELTTPSMQRV 119

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
            +  +       +          +     +     +                        
Sbjct: 120 LVEAVVTTTEFGLLRVMTTHLEYYSHPQRQVQIDAIRHLHHEAHTLSQRKFLTEERGGTF 179

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK--------- 217
            ++       L    +F                DT + +  W       +          
Sbjct: 180 EVFPRPGEAILCGDLNFPATAPEHAQILAPFNDDTPNFHDTWSVLNPGITHAPTVGIHPV 239

Query: 218 ---NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
              ++    D ++++      L    ID +    T  SDH PV V L
Sbjct: 240 DFVDRAECYDFVLITDGLVKHLKIHGIDAE----TAASDHQPVWVEL 282


>gi|149911488|ref|ZP_01900104.1| putative phospholipase C precursor [Moritella sp. PE36]
 gi|149805452|gb|EDM65460.1| putative phospholipase C precursor [Moritella sp. PE36]
          Length = 429

 Score = 58.3 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/280 (12%), Positives = 72/280 (25%), Gaps = 37/280 (13%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKEN-----NPDIICLQETKTE-DKNFPFETLQSLNYH 56
            + V ++NV ++     ++    +E        D++ LQE        F  +  +   Y 
Sbjct: 165 TLKVMSYNVWALPVIAKHIGDRFQEIPKHLKGYDVLMLQEVFASGRDAFLRDLAKEYPYQ 224

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
            +       N             + +         +               I        
Sbjct: 225 TKMLDYPGINVYDGGVTIVSRYPIVNEGQYVYPDCSGTDCFADKGVNYAEVIK------- 277

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
           N      +    +          ++ +  +   FA   NI       Y      N     
Sbjct: 278 NGKAYHVFATHTASFDTDTARDYRQRQFRQMRDFAQAQNIPVTDTVVYGGDFNVNK---- 333

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYS--FWDYYADSWSKNK---GIRI---DHIML 228
                             + A    +  Y+   +D   ++++ N    G  I   D++++
Sbjct: 334 -----LKFPTDYQQMFANLSADEPQYAGYTESTFDPRINAYAGNALSGGENIEYLDYVVV 388

Query: 229 SPEATSLLHSARIDTKPRG-----WTKP--SDHTPVIVSL 261
           S E      +      PR      W     SDH PV   +
Sbjct: 389 SNEFAKRNENINTVKIPRTTVASLWKHWNLSDHFPVKAVI 428


>gi|255727112|ref|XP_002548482.1| hypothetical protein CTRG_02779 [Candida tropicalis MYA-3404]
 gi|240134406|gb|EER33961.1| hypothetical protein CTRG_02779 [Candida tropicalis MYA-3404]
          Length = 499

 Score = 58.3 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 55/177 (31%), Gaps = 23/177 (12%)

Query: 1   MSVVTVATWNV-------------NS------IRARIHNLAAWIKENNPDIICLQET-KT 40
           +  + + ++NV             N       +R++I  L   +K  N DI+CLQE  K 
Sbjct: 90  LPTIKIMSYNVLAQTLIRREIYPTNGKILKWSVRSQI--LLDELKHYNADILCLQEVDKV 147

Query: 41  EDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT 100
           +  +F     + L Y  +     + N   ++   Q +    +     LD      +    
Sbjct: 148 QYTSFWSSQFEKLGYGSKFYRYNTKNHGCVIVFRQSLFDCKNQSFIKLDQDLNQTDDEKK 207

Query: 101 INTQTLRIGNL-YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI 156
           +    +   N+ ++ +            +      +   +  L       +     +
Sbjct: 208 LPDARIATNNIGFMVYLEFQPKFVKQYPVLENANGIIIGTTHLFWHPFGTYERTRQM 264


>gi|147860973|emb|CAN82939.1| hypothetical protein VITISV_013126 [Vitis vinifera]
          Length = 2416

 Score = 58.3 bits (139), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/259 (11%), Positives = 66/259 (25%), Gaps = 32/259 (12%)

Query: 4   VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + +WNV      ++   + A I+    D+ CLQETK          ++SL        
Sbjct: 690 LRILSWNVRGANDSSKRRXIKAVIRSQRVDLFCLQETKIX--XLSEGLVRSLG------- 740

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
                          +     +           +E      + +    N+        T 
Sbjct: 741 ---SGRWXNWVALDAVGSAGGMLVCWDKRSLEVMETEVGKFSVSCXFRNVENGLAWIFTG 797

Query: 122 TKYDDKISWIKRFLRFASQRLE-LEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
                     +             E+P    GD+N+I    +                  
Sbjct: 798 VYGPFSKGDRECLWEELGAIRGLWEDPWCLGGDFNVILSQRERNRQGRLTG--------- 848

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            + +          +         +++    +   +     R+D  +++     +     
Sbjct: 849 -AMRXFAQTVDELELMDLPMQGGAFTW----SGGRNNQSWARLDRFLVTQXWLEMFSGIA 903

Query: 241 IDTKPRGWTKPSDHTPVIV 259
                R      DH P+++
Sbjct: 904 QCRLQRPTX---DHFPILL 919


>gi|315023440|gb|EFT36448.1| AP endonuclease domain protein [Riemerella anatipestifer RA-YM]
          Length = 325

 Score = 57.9 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 44/264 (16%), Positives = 75/264 (28%), Gaps = 35/264 (13%)

Query: 2   SVVTVATWNVNSIRARIHNLAAW---IKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           S   V ++N   I+A    +A     ++  +PDII +QE      +F  E ++S+ Y  E
Sbjct: 93  SDFKVVSFN---IKAAEAGIANIDHHLESFSPDIILIQE----KGDF-KEEIESMPYRKE 144

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
               + Y+            I+                    I  + +R  N+YL     
Sbjct: 145 IDILEFYSKT---------PIIESGRILIDADNGYASYIDTEIKGKRIRFINVYLKPFEL 195

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
                       +      +     L            I    +     +      F   
Sbjct: 196 NKDMVKPSTNLTVSEEKAKSLIARFLPVFKAHQTQVEQIRLAVEKSPYPVILG-GDFNAV 254

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
                    +   TD+           +F DY          IRID++  + E       
Sbjct: 255 PNSYEYYYLSQNMTDSFLEVGKGLGT-TFHDYKFP-------IRIDYLFSTKEIKP---- 302

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
             +DT      + SDH P+I    
Sbjct: 303 VSLDTD--RSRQLSDHCPIIGEFK 324


>gi|332043935|gb|EGI80130.1| Endonuclease/exonuclease/phosphatase [Lacinutrix algicola 5H-3-7-4]
          Length = 238

 Score = 57.9 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/259 (11%), Positives = 67/259 (25%), Gaps = 24/259 (9%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + TWN N   A        I   N ++  +QE    +        +   +        
Sbjct: 1   MRIITWNCNG--AFRKKFKE-ISSLNAEVYVIQEC---EDPLKSNHKEYKLWADNYLWIG 54

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
                 +    +P   +  L   +     R              +  L+    N  T   
Sbjct: 55  DNKNKGVGVFAKPNIDLKKLDWSENYNDHRVKYFLPCKINNNFDLLALWNHSNNSPTFGY 114

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
                 +++       + + L +              +       W+     +  + +  
Sbjct: 115 IGQFWKYLQINKSNLKKCIILGDF-------------NSNKIWDKWDRWWNHSDVLEELS 161

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           +      +              +F+     +   +    ID+I  S E    L+   +  
Sbjct: 162 ELGIESLYHMYFNEEQGKESKPTFFLQRKLTKPYH----IDYIFGSTEFIKTLNKIEVGN 217

Query: 244 KPRGWTKPSDHTPVIVSLD 262
               W K SDH P+I   +
Sbjct: 218 SS-HWLKLSDHNPIITDFE 235


>gi|319954283|ref|YP_004165550.1| endonuclease/exonuclease/phosphatase [Cellulophaga algicola DSM
           14237]
 gi|319422943|gb|ADV50052.1| Endonuclease/exonuclease/phosphatase [Cellulophaga algicola DSM
           14237]
          Length = 339

 Score = 57.9 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 43/270 (15%), Positives = 80/270 (29%), Gaps = 42/270 (15%)

Query: 4   VTVATWNVNSIR--------ARIHNLAAWIKENNPDIICLQE--TKTEDKNFPFETLQSL 53
           ++V T+NV S          A        I   +PDIIC QE   K +         ++ 
Sbjct: 100 LSVMTFNVRSFNKNMNIKNTAVFEETLELITTEDPDIICFQEFYYKKQKD------FKNY 153

Query: 54  NY-HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
            Y ++E         +   SKY    I+     +  +           +   T+R+ NL+
Sbjct: 154 KYMYLEYIKNPGKVKLGFYSKYP---IINKGLINFPESPNNAAFVDIVVKNDTVRVYNLH 210

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
           L     I     D  I   +   +   +     +            +    Y  II  + 
Sbjct: 211 LESLRVIP----DKDIIAQEESKKLYRRLTNSFKKQQQQAQIIKEHKDKSPYRAIICGDF 266

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                       +           + +   + + ++            +RID I++    
Sbjct: 267 NGTQYSNVYKTIRGDMQDTFQEKGSGYGRTYNFRYYP-----------VRIDFILVEDSF 315

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
                   + +      K SDH PV+ S +
Sbjct: 316 -------NVLSHKNYNVKLSDHFPVMTSFN 338


>gi|149059565|gb|EDM10503.1| rCG65928 [Rattus norvegicus]
          Length = 267

 Score = 57.9 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 43/224 (19%), Positives = 71/224 (31%), Gaps = 27/224 (12%)

Query: 6   VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + N+N + + I    L  WI+  +P   CLQET   DK+  +  ++      +  GQK
Sbjct: 12  LISLNINGLNSPIKRHRLTNWIRNEDPAFCCLQETHLRDKDRHYLRVKGWKTTFQANGQK 71

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
              GVAIL   +                 +            + I          I +  
Sbjct: 72  KQAGVAILISNKINF--------------QLKVIKKDKEGHFIFIKGKIHQDELSILNIY 117

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
             +  +           +  +    I  GD+N      D        +D     EV    
Sbjct: 118 APNTRAPTYVKETLLKLKTHIAPHTIIVGDFNTPLSSMDRSWKQKLNSDVDRLREVMSQM 177

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227
                   TD  R  +     Y+F+     ++SK     IDHI+
Sbjct: 178 ------DLTDIYRTFYPKAKGYTFFSASHGTFSK-----IDHII 210


>gi|330469006|ref|YP_004406749.1| endonuclease/exonuclease/phosphatase [Verrucosispora maris
           AB-18-032]
 gi|328811977|gb|AEB46149.1| endonuclease/exonuclease/phosphatase [Verrucosispora maris
           AB-18-032]
          Length = 321

 Score = 57.9 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 44/318 (13%), Positives = 78/318 (24%), Gaps = 48/318 (15%)

Query: 4   VTVATWNV-------NSIR--ARIHNLAAWIKENNPDIICLQETK---TEDKNFPFETLQ 51
           +   T+N+       +++R   R   +   I+   PD++ +QE K           E   
Sbjct: 1   MRFVTYNLLDLTLTADNLREANRQQRVIDTIRSLEPDVVAVQELKSPPASAARLAAELAD 60

Query: 52  SLNY-------------HIETCGQKSYNGVAILSK---------YQPIEIVTHLPGDDLD 89
                            H    G  + +   +                  V +  G    
Sbjct: 61  RTGLTSTVATNGSARAIHAVAVGDHTVHTALLWRPGLTPLPHTFRTYSPAVHYDGGWRGI 120

Query: 90  VQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLI 149
                +   F I+ Q +   + + P           + +          +        + 
Sbjct: 121 GYGSMVRLAFQIDGQPITFASYHAPAYGRHRRIDQAEAVLAALTRPHELALIGSDFNSIG 180

Query: 150 FAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN----MGFTDAIRATHDTHHLY 205
            A        P        W +      E     Q+ +         +A           
Sbjct: 181 AARTNGADYDPDPYTGRPWWPDLVHQCHEPTHPSQRHRADRRPAQVWEAGGLHDVAAATR 240

Query: 206 SFWDYYADSWS------KNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
           S W      W       +    R+D I  +      + S  +   P      SDH PV V
Sbjct: 241 SPWKATTGHWPTCPYGVRGIARRVDTIHATQPVLRAVRSLTVVDNPTTRA-ASDHLPVTV 299

Query: 260 SLDIPEPRKKQQDSTSQN 277
            LD   PRK   +     
Sbjct: 300 DLD---PRKLAVNPGDSR 314


>gi|188584031|ref|YP_001927476.1| endonuclease/exonuclease/phosphatase [Methylobacterium populi
           BJ001]
 gi|179347529|gb|ACB82941.1| Endonuclease/exonuclease/phosphatase [Methylobacterium populi
           BJ001]
          Length = 283

 Score = 57.9 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/278 (13%), Positives = 66/278 (23%), Gaps = 42/278 (15%)

Query: 4   VTVATWNV------NSIRARIHNLAAWIKENNPDIICLQET---KTEDKNFPFET----L 50
           + + T+NV      +  R     +A  I    PDI+ LQE    +              L
Sbjct: 33  LRLLTYNVRHCRGTDG-RVAPERVARVIAALEPDIVALQEVDVGRARTGGLDQAEAIARL 91

Query: 51  QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
             ++ H                       +         V+   +E    +  +      
Sbjct: 92  VGMSSHFHPALHVEEERYGDALLTHLPSRLRRADALPGLVRRPGLEPRGALWAEITVGTA 151

Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170
                         +                    EP++  GD+N               
Sbjct: 152 RLQVLTTHFGLLGAERIAQAEALLGPDWLGDPACREPVVLLGDFNATGWSRAYRRLGRRL 211

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230
            DA      R+  +   +      +                         +RIDH+ +S 
Sbjct: 212 TDARRLTGERRWRRGTASFPSRLPL-------------------------LRIDHVFVSE 246

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268
                +    +   P      SDH PV+  + I   R 
Sbjct: 247 GV--RVDRIAVVDTPLARL-ASDHLPVLAEIRIGPARD 281


>gi|116619520|ref|YP_821676.1| endonuclease/exonuclease/phosphatase [Candidatus Solibacter
           usitatus Ellin6076]
 gi|116222682|gb|ABJ81391.1| Endonuclease/exonuclease/phosphatase [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 234

 Score = 57.9 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/266 (14%), Positives = 67/266 (25%), Gaps = 48/266 (18%)

Query: 4   VTVATWNV------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57
           + VAT+NV      +  R   H +   + E   D+I LQE               L +H 
Sbjct: 11  LRVATYNVHKCRGMDG-RVSPHRIGRVLNELKADVIGLQEV--------------LGHHA 55

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
           E    +   G A+    +                        T+  +             
Sbjct: 56  EIIAAEMKMGFALGENRRHQGAAYGNVVLSRFPIRSTRNYDLTVEGR------------- 102

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
                  + +           S  L +    +         Q        +  + A  + 
Sbjct: 103 -------EQRGCLRADIDVHGSGVLHIFNVHLGTAWPERRHQGRRLVAAELLGDIALDSP 155

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
            V          G    +  +H     + +  Y          + +DHI   P     LH
Sbjct: 156 RVLIGDFNEWTRGLATKLLRSHMKTANFRWRSYPGLLPV----LHLDHIYYDPAL--SLH 209

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263
             ++   P      SDH P+     +
Sbjct: 210 RVQVHRSPLSLL-ASDHLPLFADFKL 234


>gi|53715258|ref|YP_101250.1| hypothetical protein BF3974 [Bacteroides fragilis YCH46]
 gi|52218123|dbj|BAD50716.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
          Length = 678

 Score = 57.9 bits (138), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 41/284 (14%), Positives = 73/284 (25%), Gaps = 37/284 (13%)

Query: 2   SVVTVATWNVN--SI---RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56
           ++V V  WN+    I         +   I+ +  D+I +QE              SL YH
Sbjct: 409 NIVKVLQWNIWHGGIHLGNEGQQRVLDLIRSSRADVIMMQE----AYGIQQMLADSLGYH 464

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
           ++T      N                    +                  LR         
Sbjct: 465 LKT-RSLKDNLAMYSRFPLEAIAWREPFKSNPAKITLPNGKRIMFVDCWLRYAYRPEYTS 523

Query: 117 NPITSTKYDDKI----------SWIKRFLRFASQRLELEEPLIFAGDYN-IIPQPHDCYN 165
                                      + +  +  LE + P+I  GD+N           
Sbjct: 524 GYAEKGLDPSVWVAEDSILALPDIRNIYTKDIAPNLETDMPVIVTGDFNSCSHLDWTERA 583

Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG----I 221
             +      +      + + +   GF D+ R  +     Y        + +   G     
Sbjct: 584 KPLHHG---YGPVAFPASRYMLENGFKDSFREKNPDEIAY-----QGGTVAAIYGQMQMS 635

Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTK--PSDHTPVIVSLDI 263
           RID I         + S++I            SDH  V+   ++
Sbjct: 636 RIDFIYYKGGL--KVLSSKIVRTAPEIDYVWASDHAAVLTVFEV 677


>gi|269118848|ref|YP_003307025.1| endonuclease/exonuclease/phosphatase [Sebaldella termitidis ATCC
           33386]
 gi|268612726|gb|ACZ07094.1| Endonuclease/exonuclease/phosphatase [Sebaldella termitidis ATCC
           33386]
          Length = 283

 Score = 57.9 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 43/275 (15%), Positives = 71/275 (25%), Gaps = 44/275 (16%)

Query: 4   VTVATWNV----NSIRARIHNLAAWIKENNPDIICLQET-KTED-----KNFP-FETLQS 52
           + VAT+N+    N+ +  +   A  IK+ NPDII +QE  +  +             L  
Sbjct: 35  IRVATYNIAAGANNFKVDLKLTAETIKKINPDIIAIQEVDRNTERSGRTDQIKVLSELTG 94

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
            NY              I    +   +   +            E         + +    
Sbjct: 95  YNYVYGKTIDFQGGEYGIAVLSKHPIVSNEIIKLPYTNTDTKKEEEPR-----IALVTKV 149

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
              G  +  T  +  + W +       Q   + E  +      I+    +        N 
Sbjct: 150 DVPGFEVPVTFINTHLDWHEDPNIRLQQVRTINEVTLDMRGIKILAGDFNDTL-----NS 204

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                  R                A +                       ID I L+   
Sbjct: 205 VIGREMERYWTTVFDGKTDHRTWPAVNPEVA-------------------IDQIFLNNAQ 245

Query: 233 TSLLHSARIDT----KPRGWTKPSDHTPVIVSLDI 263
              +    +      K   W   SDH PVIV L +
Sbjct: 246 VWKVEKVYVPNTGTEKDTDWKTVSDHIPVIVDLKL 280


>gi|58259579|ref|XP_567202.1| phospholipase C [Cryptococcus neoformans var. neoformans JEC21]
 gi|134107017|ref|XP_777821.1| hypothetical protein CNBA5190 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50260519|gb|EAL23174.1| hypothetical protein CNBA5190 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57223339|gb|AAW41383.1| phospholipase C, putative [Cryptococcus neoformans var. neoformans
           JEC21]
          Length = 529

 Score = 57.9 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 42/260 (16%), Positives = 77/260 (29%), Gaps = 27/260 (10%)

Query: 3   VVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKT-EDKNFPFETLQ-SL 53
            + V ++NV  +       R RIH +A ++  ++ DI+CLQE    +D     E +Q +L
Sbjct: 13  TLKVLSFNVWGLAIVSKDRRTRIHAIADYLASSSYDIVCLQELWIYKDYEVVREAVQRNL 72

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIV-----------THLPGDDLDVQARFIEATFTIN 102
            +          +G+AI +++  I                  GD    +A          
Sbjct: 73  PFSRFFHTGALGSGLAIFTRFPLIAAHALPYSLSGSPAQAFAGDFFVKKAAANVVILHPV 132

Query: 103 TQTLRIGNLYLP-HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161
              + I N ++   G     T+   +I+                  +   GD+N  P   
Sbjct: 133 LGEVEIWNTHMHAAGEHPPDTRQAHRIAQSWELANAVRGGAAKGRYVFVMGDFNSQPWSI 192

Query: 162 DCYNPIIW------ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW 215
                               +     S                    + YS      +  
Sbjct: 193 PIAMMRDHAQLMDSFGQVHPSTNSEISPPPSPAEALRVYGMTCDSPLNTYSAGKPIPEHV 252

Query: 216 SKNKGIRIDHIMLSPEATSL 235
            +  G R+D+I     A + 
Sbjct: 253 LEKGGKRLDYIFFRQPAIAR 272


>gi|149916430|ref|ZP_01904949.1| prephenate dehydratase [Roseobacter sp. AzwK-3b]
 gi|149809700|gb|EDM69554.1| prephenate dehydratase [Roseobacter sp. AzwK-3b]
          Length = 305

 Score = 57.9 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/310 (12%), Positives = 69/310 (22%), Gaps = 63/310 (20%)

Query: 4   VTVATWNVNSIRARIHNL------------------------AAWIKENNPDIICLQETK 39
           + +AT+NV S+R R  +L                        A  I++ + D++ LQE  
Sbjct: 1   MRIATFNVQSLRLRGDHLSGAHDDDTPERADPSLDHRDRLLTAQVIRDLDADVLALQEV- 59

Query: 40  TEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF 99
                F    L   + H             I         +       +        AT 
Sbjct: 60  -----FDSAALDHFHDHYLIPAGMPPYPHRICLPGNDGRGLDIALLSRMTPGDVVSHATL 114

Query: 100 TINTQTLRIGNLYLPHGNPITSTKYDDK---------ISWIKRFLRFASQRLELEEPLIF 150
                 L +                  +                   A++ +   E    
Sbjct: 115 RPADLGLAVPPRLRAETPIFRRDCLRVELAGLTLFLVHFKAPTPDPDAARPVRALEAAAL 174

Query: 151 AGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDY 210
                           +I  +                   F+  +         +S+ D 
Sbjct: 175 RALIEARFDDPARAMWLILGDLNDPWDAKDPPATAPVLPPFSVNLMDRLPEDARWSYHD- 233

Query: 211 YADSWSKNKGIRIDHIMLSPEATSLLHSA--RIDTKPRGWT-----------------KP 251
              +WS   G R D I+ SP        A                               
Sbjct: 234 ---AWSDRYG-RPDQILASPALARACPDAMPETLRHGMALEAARNDGPHLPDVGRHRPHA 289

Query: 252 SDHTPVIVSL 261
           SDH  +++ +
Sbjct: 290 SDHAALMIEI 299


>gi|291515850|emb|CBK65060.1| Metal-dependent hydrolase [Alistipes shahii WAL 8301]
          Length = 313

 Score = 57.9 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/280 (13%), Positives = 68/280 (24%), Gaps = 43/280 (15%)

Query: 4   VTVATWNV-------------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETL 50
           + VA++N+             N    R   +   ++  + DI   QE       F  E +
Sbjct: 49  IRVASYNIQYDNRNEEAGRWEN----RKEIVCRLLEAEDFDIFGAQE----PYKFQIEDM 100

Query: 51  QSL--NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108
            +    Y                S      +             +F          +   
Sbjct: 101 AAALPGYTWI-----------GTSVTGEDNVERRHFNPIFYKTDKFEVLESGSFWYSETP 149

Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP------QPHD 162
                   +  +    +     +K   +         + +                    
Sbjct: 150 NVPNTKFSDSYSPRMCNWAHFRVKATGKEFFHFNSHFDHIGTVARAESAKLLIEKVAEIA 209

Query: 163 CYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHD--THHLYSFWDYYADSWSKNKG 220
              P     D     +       + +    D+   T D       S+  Y   S    K 
Sbjct: 210 GKTPAFCTGDFNSNQQTNVYNTIVTSGTLVDSYARTTDKVNADWPSYNGYKYISTPPAKA 269

Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
            RIDHI ++    + + S  I         PSDH PV++ 
Sbjct: 270 SRIDHIFVTKG-RTKVQSWAIVNTSYSQKYPSDHFPVVIE 308


>gi|313206564|ref|YP_004045741.1| endonuclease/exonuclease/phosphatase [Riemerella anatipestifer DSM
           15868]
 gi|312445880|gb|ADQ82235.1| Endonuclease/exonuclease/phosphatase [Riemerella anatipestifer DSM
           15868]
 gi|325335988|gb|ADZ12262.1| Endonuclease/exonuclease/phosphatase [Riemerella anatipestifer
           RA-GD]
          Length = 326

 Score = 57.9 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 44/264 (16%), Positives = 75/264 (28%), Gaps = 35/264 (13%)

Query: 2   SVVTVATWNVNSIRARIHNLAAW---IKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           S   V ++N   I+A    +A     ++  +PDII +QE      +F  E ++S+ Y  E
Sbjct: 94  SDFKVVSFN---IKAAEAGIANIDHHLESFSPDIILIQE----KGDF-KEEIESMPYRKE 145

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
               + Y+            I+                    I  + +R  N+YL     
Sbjct: 146 IDILEFYSKT---------PIIESGRILIDADNGYASYIDTEIKGKRIRFINVYLKPFEL 196

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
                       +      +     L            I    +     +      F   
Sbjct: 197 NKDMVKPSTNLTVSEEKAKSLIARFLPVFKAHQTQVEQIRLAVEKSPYPVILG-GDFNAV 255

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
                    +   TD+           +F DY          IRID++  + E       
Sbjct: 256 PNSYEYYYLSQNMTDSFLEVGKGLGT-TFHDYKFP-------IRIDYLFSTKEIKP---- 303

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
             +DT      + SDH P+I    
Sbjct: 304 VSLDTD--RSRQLSDHCPIIGEFK 325


>gi|147838411|emb|CAN74319.1| hypothetical protein VITISV_035345 [Vitis vinifera]
          Length = 1802

 Score = 57.9 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 4   VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETK 39
           + + +WN   + +R     +  +++   PDI+ +QETK
Sbjct: 780 IKIISWNTRGLGSRKKRRVVKDFLRSEKPDIVMIQETK 817


>gi|147862335|emb|CAN81919.1| hypothetical protein VITISV_030820 [Vitis vinifera]
          Length = 1136

 Score = 57.9 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 71/246 (28%), Gaps = 30/246 (12%)

Query: 16  ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75
           ++   +  +I+    D++C+QETK +        ++SL        +      A      
Sbjct: 643 SKRKIIKTFIRNQKVDLLCIQETKIQP--MSEGVVRSLGSRRFLDWRALDADGAAGGLXI 700

Query: 76  PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135
             +  +    D  + Q         +    + +                         + 
Sbjct: 701 CWDKRSLEVVDWEEGQYSLXCRFKYVEDGAVWVFTGVYGPFTKEERDCL---------WE 751

Query: 136 RFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAI 195
              + R   +EP    GD+N      +             T  +R+    + ++G  D  
Sbjct: 752 ELGAVRGIWDEPWCLGGDFNSTLYQRER------SRQGRITPTMRRFAHIIDDLGLVDLP 805

Query: 196 RATHDTHHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDH 254
                   ++++          N    R+D  ++SP          I    R     SDH
Sbjct: 806 L----QGGVFTW--SRGL---NNXSWARLDRFLVSPSWLDKFSGV-IQR--RLXRPVSDH 853

Query: 255 TPVIVS 260
            P+++ 
Sbjct: 854 FPILLE 859


>gi|309798808|ref|ZP_07693072.1| exodeoxyribonuclease [Streptococcus infantis SK1302]
 gi|308117625|gb|EFO55037.1| exodeoxyribonuclease [Streptococcus infantis SK1302]
          Length = 59

 Score = 57.9 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 24/50 (48%), Gaps = 10/50 (20%)

Query: 4  VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDK 43
          + + +WN++S+ A +           ++   +   N DII +QETK   K
Sbjct: 1  MKLISWNIDSLNAALTSDSARAKLSQDVLQTLVAENADIIAIQETKLSAK 50


>gi|153806752|ref|ZP_01959420.1| hypothetical protein BACCAC_01023 [Bacteroides caccae ATCC 43185]
 gi|149131429|gb|EDM22635.1| hypothetical protein BACCAC_01023 [Bacteroides caccae ATCC 43185]
          Length = 366

 Score = 57.9 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 45/277 (16%), Positives = 82/277 (29%), Gaps = 35/277 (12%)

Query: 3   VVTVATWNVNSIRARI------HNLAAWIKENNPDIICLQETKTEDKNFPFE----TLQS 52
           V+TVAT+NV+    R         +AA ++    DI+C QE    D  F  +     L  
Sbjct: 109 VLTVATYNVDGFN-REHTGYSCKEIAAQMRNLKADILCFQEF-GIDDEFGVDSLCTALSD 166

Query: 53  LNYHIETCGQKSYNGV------AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
             YH      +  + +          K + + I  +     L            +    L
Sbjct: 167 WPYHYIPSSPERQHLLQLAVFSRYSIKKEHLIIYPNSGNCSLWCDIEVNGRMIRLFNNHL 226

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
           +   +           + D+     +  L  A    E         ++         Y  
Sbjct: 227 QTTEVSRNKRKLEKELRQDNSQRAKRAALTLADGLHENFRKRAVQANFINQLVSASPYPT 286

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226
           ++   D               +          H   + + ++            +RID+I
Sbjct: 287 LV-CGDFNSLPSSYVYHTVKGDKLLDGFQTGGHGYMYTFKYF---------KHLLRIDYI 336

Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           + SPE         +D     W   SDH PV++ + +
Sbjct: 337 LHSPELK------GLDYFSPDWEY-SDHNPVVMRMKL 366


>gi|156144636|gb|ABU52967.1| hypothetical protein [Dunaliella viridis]
          Length = 4640

 Score = 57.9 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 44/271 (16%), Positives = 84/271 (30%), Gaps = 19/271 (7%)

Query: 1    MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
            +  + + T NV  +     ++   +  ++PDI+ L ETK  D N     L  L  + +  
Sbjct: 1902 LCSLKLFTHNVKGLNISQSDMRQALHAHDPDILVLTETKLYDSN-NKPWLNKLLKNYKWW 1960

Query: 61   GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
                 +   ++     I  ++       D + R +  T     Q L I   Y P G+   
Sbjct: 1961 SSPHGSAGTLMGIRTGIAGLSQAKLTYADQEGRLVAVTLRSQHQDLIIIGTYWPSGSSTE 2020

Query: 121  STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
            +      +    R L   +              Y       +     +    A       
Sbjct: 2021 AIASRHTMQGKVRDLITENHSCTPLLLGDMNATYY------NDDRSSVNVTTADRMYRAF 2074

Query: 181  QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG------IRIDHIMLSPEATS 234
                 L+ +   D  R   +    +++   +  +     G       RID I+L  +   
Sbjct: 2075 LQEVNLKPLPEHDPGRERVNEPRPWTY--LHPTAVDSTSGNTIYTTSRIDDILLPKQLAD 2132

Query: 235  LLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
            +  SA   T        SDH P++  + +  
Sbjct: 2133 IFTSAVTCTNGYR----SDHIPLVAYIRLDA 2159


>gi|297170635|gb|ADI21660.1| metal-dependent hydrolase [uncultured Rhizobium sp. HF0130_09F11]
 gi|297171574|gb|ADI22571.1| metal-dependent hydrolase [uncultured Rhizobium sp. HF0500_10F10]
          Length = 248

 Score = 57.5 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/266 (14%), Positives = 77/266 (28%), Gaps = 41/266 (15%)

Query: 3   VVTVATWNVN-SI----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57
           +  VA++N+  S+    R R   +   + E + DI+ LQE          + L SL    
Sbjct: 1   MFRVASYNIRKSVGTDWRRRPKQILDVLTELDADIVALQEV----DRRLGDRLSSL---- 52

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
                 S + +A ++ ++PI                 +     +  +   +     P G 
Sbjct: 53  ------SPSLIAEMTHFRPIRFGVRPGSLGWHGNTILVRKDVELLRRKRLVLPALEPRGA 106

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
            +   +  D    +              +          + +P      ++  +   +  
Sbjct: 107 ALADLQIGDLKIRVVGMHLGLVGLWRKRQARAVLDQLASLEEPLP---TVMMGDLNQWNT 163

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
           E        ++        + H      SF                D I+ S      + 
Sbjct: 164 EGGCLAHFAEDHHVIAPGLSFHSQMPFVSF----------------DRIITS--LDIHVD 205

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +A + +  R     SDH PV   L +
Sbjct: 206 AAAVHSSERARL-ASDHLPVWADLSL 230


>gi|294897088|ref|XP_002775817.1| Craniofacial development protein, putative [Perkinsus marinus ATCC
           50983]
 gi|239882170|gb|EER07633.1| Craniofacial development protein, putative [Perkinsus marinus ATCC
           50983]
          Length = 669

 Score = 57.5 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 46/272 (16%), Positives = 81/272 (29%), Gaps = 42/272 (15%)

Query: 2   SVVTVATWNVNSIRARIH-----NLAAWIKENNPD--IICLQETKTEDKNFPFETLQSLN 54
           SV+ + TWNV   R+++       +   +K    D  II LQET+  ++       +SL 
Sbjct: 100 SVIRMYTWNV---RSQLGYANRLAVVESLKAIGSDVPIIALQETRLREEV----QGESLG 152

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
            HI                     +  ++        +  I      +  T+ +      
Sbjct: 153 DHILYSSPALR-----GIGGVGFLVHPNVRVQSWVSVSNRIAHITLNSGITIVVCYAPTE 207

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
                              F     + + LE P I  GD+N         +PI     A 
Sbjct: 208 VA----------PQGQKDEFWDAVEEVVRLERPEIVCGDFNARLGSDLARDPIHGLGKAY 257

Query: 175 FTLEVRQSFQKLQNMGF-----TDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
              E   +  +L  +         A        HL ++       W +     +DH ++ 
Sbjct: 258 AYEETNDNGWRLVMLAAASHMGHAASHFLKPQTHLGTWHSPVEKCWHQ-----LDHFLIR 312

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
                 +   R+     G    SDH  + +S 
Sbjct: 313 SNRKLQVLDVRVRRTVMGS---SDHCALELSF 341


>gi|149002138|ref|ZP_01827092.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP14-BS69]
 gi|147759947|gb|EDK66937.1| exodeoxyribonuclease III [Streptococcus pneumoniae SP14-BS69]
          Length = 63

 Score = 57.5 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 6/48 (12%)

Query: 217 KNKGIRIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
            N G RID+ + S      +  +  ID+  R      DHTP+++ +D+
Sbjct: 21  NNTGWRIDYWLTSNRIADKVTKSDMIDSGARQ-----DHTPIVLEIDL 63


>gi|312076146|ref|XP_003140730.1| hypothetical protein LOAG_05145 [Loa loa]
 gi|307764104|gb|EFO23338.1| hypothetical protein LOAG_05145 [Loa loa]
          Length = 415

 Score = 57.5 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 42/295 (14%), Positives = 75/295 (25%), Gaps = 27/295 (9%)

Query: 3   VVTVATWNV-------------NSIRARIHNLAAWIKENNPDIICLQETKTEDK--NFPF 47
           V+ V + N              +S+R  I  +   +  N  DI+ L+E   E        
Sbjct: 4   VLRVVSLNCWALPLPWPFRSNDHSLR--IKKIGEALLLNEYDIVALEEVWGEHDFLRLQE 61

Query: 48  ETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ--- 104
              +   Y        + +G+ + S+Y  +  + H    +           F        
Sbjct: 62  ALKKIFGYSYYFHSGFTGSGICVFSRYPIVSTLMHRFTLNGFAHHIHRGDWFAGKGVGLV 121

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
            + I    +         +Y+             +  L             +I       
Sbjct: 122 EIEIEQYRVNFYAAHLHAEYNPNKDLYLPHRLAQAFELAQFVKHTSYSADALILAGDFNI 181

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRID 224
            P              +     +     D         + Y+       +  KN G R+D
Sbjct: 182 EPDNLAYQLIVQNANLRDAWIQKPNSCDDCGATFGRLDNCYT--PQRFKNK-KNYGKRLD 238

Query: 225 HIML-SPEATSLLHSARIDTKPRGWTK---PSDHTPVIVSLDIPEPRKKQQDSTS 275
           +IM  S  +   L    I        K    SDH  V     + E   +     S
Sbjct: 239 YIMYRSGRSKIELKLCEIRMNRIHDQKSINYSDHVGVYAEFSLSEQHDEITKGLS 293


>gi|167587042|ref|ZP_02379430.1| Endonuclease/exonuclease/phosphatase [Burkholderia ubonensis Bu]
          Length = 284

 Score = 57.5 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/302 (13%), Positives = 80/302 (26%), Gaps = 61/302 (20%)

Query: 4   VTVATWNV------NSI----R--ARIHNLAAWIKENNPDIICLQET---------KTED 42
           + +  WN+      + +    R  A    L  +      D++CLQE            E 
Sbjct: 1   MRLIDWNIQWGRDADGVVDLPRTIAAARGLGDF------DVLCLQEVTRGFGALAGHPEP 54

Query: 43  KNFPFETLQSLNYHI-----------ETCGQKSYNGVAILSKYQPIEIVTHLPGDD---- 87
             F         + +                +   G AI S+     ++  L        
Sbjct: 55  DQFAELAALLPGFTVVEAIGADLPPTAPGAPRRQFGNAIASRLPVGRVMRRLLPWPADDA 114

Query: 88  -LDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEE 146
              +    +E      +  LR+   +L + +        D +    R     + R    E
Sbjct: 115 APSMPRVALEVELATASGPLRVTTTHLEYYSARQRLAQVDALHDRHREACAHADRPARAE 174

Query: 147 PLIFAGDYNIIPQPHDCYNPIIWENDACFT----LEVRQSFQKLQNMGFTDAIRATHDTH 202
                      P+            D+         V  + + +          A   T 
Sbjct: 175 HADSPFSATAQPRDAIVCGDFNSAYDSDAYRRFLEPVEGAPRFVDAWAALHPGAAPPPTA 234

Query: 203 HLY-S-FWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
            +Y +  W     +         D + ++      +    ID   R     SDH P+++ 
Sbjct: 235 GIYDTVQWSEGPLA--------CDFVFVTDTLLPRVARCEIDGDLR----ASDHQPIVLE 282

Query: 261 LD 262
           L+
Sbjct: 283 LN 284


>gi|294627625|ref|ZP_06706207.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|294666886|ref|ZP_06732117.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292597977|gb|EFF42132.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292603334|gb|EFF46754.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 287

 Score = 57.5 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/274 (13%), Positives = 71/274 (25%), Gaps = 34/274 (12%)

Query: 4   VTVATWNVNSIRA------------RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51
           + V ++NV   R             R   + A IK+ +PD+   QE  +E   F  E L 
Sbjct: 34  LRVMSFNV---RVPADTDGDKRWQVRRAAMVALIKQTHPDVFGTQELVSEQAAFLAEQLP 90

Query: 52  SLNYHIETCGQKSYNGVA-ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
              +  +       +    +    + +E+V        D   R    T+      +    
Sbjct: 91  DYRWFGQGRRGDDSDEHMGVFYDARVLEVVESGNFWLSDTPERAGSITWGNVLPRMATWA 150

Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170
           L+    +      ++    +         +        +       +P          + 
Sbjct: 151 LFERRSDKRRFYLFNTHFPYRDEDEPARERSAR-----LILSRIAQLPATIPVVLTGDFN 205

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230
           +D         +                 +T   ++               RID I+   
Sbjct: 206 SDPDKITYPTLTAVLRDARAQASKRSGPENTFQDFTTHPTR----------RIDWILY-R 254

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
                           G   PSDH PV+   D P
Sbjct: 255 GLRPS--RFATLDDRPGGILPSDHYPVMAEFDWP 286


>gi|225439538|ref|XP_002264351.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 2042

 Score = 57.5 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/137 (12%), Positives = 40/137 (29%), Gaps = 4/137 (2%)

Query: 4   VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTED--KNFPFETLQSLNYHIET 59
           + + +WNV      ++   +  +I+    D+IC+QETK +    N             + 
Sbjct: 800 MKILSWNVRGANDSSKRKVIKTFIRNQRVDVICIQETKIQAMSDNIARSIGSGRFLEWKA 859

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
              +  +G  ++   +    V         +  RF             + +L+       
Sbjct: 860 VNAEGASGGILMCWDKRTLEVLDWEEGQFTLSCRFRNVENGAIWIFTGVYDLFSKMEREA 919

Query: 120 TSTKYDDKISWIKRFLR 136
              +        +    
Sbjct: 920 LWDELGAIRGLWEDPWC 936


>gi|308274774|emb|CBX31373.1| hypothetical protein N47_E48850 [uncultured Desulfobacterium sp.]
          Length = 335

 Score = 57.5 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/277 (12%), Positives = 69/277 (24%), Gaps = 24/277 (8%)

Query: 4   VTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           + + ++N+         N  + R   +   +    PD++ LQE    D   P  +     
Sbjct: 49  LKIMSFNIRRGTARDGKNHWKYRRSLVHEILDLYCPDVLGLQE--ALDFQIPEISAMLPG 106

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL-RIGNLYL 113
           Y     G    +     + +               +               + RI     
Sbjct: 107 YKNVGIGDLGGSKRLHNTIFYDANRFELSEEGTFWLSDTPDIPRSKGWGNIMPRICTWVR 166

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP-----QPHDCYNPII 168
                     Y               + +      I A  Y               +  I
Sbjct: 167 LIEKNSGQAFYFYNTHLDHLSQGSRKKSVIFLIKRIHARSYPDPFILTGDFNARERSAPI 226

Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL-YSFWDYYADSWSKNKGIRIDHIM 227
                   L ++     +      D  R  H  +    +F  +    +      R+D+I 
Sbjct: 227 QYLKGKSPLRIKTKLTVINPTPLVDTFRVRHPKNRNSVTFHGFRKYFFR----FRLDYIF 282

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
           +       +  A+I         PSDH P+   + +P
Sbjct: 283 VPSSV--RVLDAKIIQLRWKKCYPSDHFPLFTHIGLP 317


>gi|74318784|ref|YP_316524.1| hypothetical protein Tbd_2766 [Thiobacillus denitrificans ATCC
           25259]
 gi|74058279|gb|AAZ98719.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC
           25259]
          Length = 281

 Score = 57.5 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/294 (12%), Positives = 73/294 (24%), Gaps = 48/294 (16%)

Query: 4   VTVATWNV------NSIRARIHNLAAWIKENNP-DIICLQETKTE---------DKNFPF 47
           + + +WN+      +  R  +  L   I+     D+ICLQE             +  F  
Sbjct: 1   MKLLSWNIQWGRGMDG-RVDLARLVRAIEHLGAFDVICLQEVAVNFPALPGSRGEDQFAQ 59

Query: 48  ETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107
                  Y           G +  S++          G        +       + Q   
Sbjct: 60  LAAALPGYTALYVAATDVPGASGRSRFGNAIFSRLPVGQVWRHALPWRPEAGVPSMQRAL 119

Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP------- 160
           +  + L    P+       +     +          L         +    +        
Sbjct: 120 LEAVILREAGPLRVLTTHLEYYSQGQRQLQIEAIRNLHAEACAMTRWAAPEEERGGPFAS 179

Query: 161 HDCYNPIIWENDACFTL----------EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDY 210
                  I   D  F+               +     +          H         D+
Sbjct: 180 QGRPAQAILCGDMNFSPSAAERARLLAPFADATPAWVDAWTALHPGVPHPPSVGIHPVDF 239

Query: 211 --YADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
             + + +        D +  +   ++ L    +D +    T+ SDH PV V+LD
Sbjct: 240 VDHPECF--------DFVFATEGLSAALSDYGVDAE----TEASDHQPVWVALD 281


>gi|322829003|gb|EFZ32580.1| apurinic/apyrimidinic endonuclease, putative [Trypanosoma cruzi]
          Length = 612

 Score = 57.5 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/145 (13%), Positives = 41/145 (28%), Gaps = 20/145 (13%)

Query: 4   VTVATWNVNS-------IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFET------- 49
           + + +WNV         IR    ++A++++    DI+CLQE K        +        
Sbjct: 1   MFIISWNVAGWSSTSRMIREDFGSIASFLQRTQADIVCLQEVKGSWAKLEADPCGMGASD 60

Query: 50  ----LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT 105
               L    +          +           + +T         +    +    I T  
Sbjct: 61  GGRTLAIDGWESFWSFSGKAHRGFNGVVSFVRKDLTWWCDSRPFSEEDLNDEGRVIVTCH 120

Query: 106 --LRIGNLYLPHGNPITSTKYDDKI 128
               + N Y+ +        +  + 
Sbjct: 121 SAFVVVNTYVVNARHGQRMAFKMRF 145



 Score = 50.2 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 17/37 (45%)

Query: 204 LYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            Y+ WD   +   +N+G RID+I++       L    
Sbjct: 393 PYTCWDQSRNRRQRNEGTRIDYILIDEMLLPALVPCG 429


>gi|71654548|ref|XP_815891.1| apurinic/apyrimidinic endonuclease [Trypanosoma cruzi strain CL
           Brener]
 gi|70880981|gb|EAN94040.1| apurinic/apyrimidinic endonuclease, putative [Trypanosoma cruzi]
          Length = 612

 Score = 57.5 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/145 (13%), Positives = 41/145 (28%), Gaps = 20/145 (13%)

Query: 4   VTVATWNVNS-------IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFET------- 49
           + + +WNV         IR    ++A++++    DI+CLQE K        +        
Sbjct: 1   MFIISWNVAGWSSTSRMIREDFGSIASFLQRTQADIVCLQEVKGSWAKLEADPCGMGASD 60

Query: 50  ----LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT 105
               L    +          +           + +T         +    +    I T  
Sbjct: 61  GGRTLAIDGWESFWSFSGKAHRGFNGVVSFVRKDLTWWCDSRPFSEEDLNDEGRVIVTCH 120

Query: 106 --LRIGNLYLPHGNPITSTKYDDKI 128
               + N Y+ +        +  + 
Sbjct: 121 SAFVVVNTYVVNARHGQRMAFKMRF 145



 Score = 50.2 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 17/37 (45%)

Query: 204 LYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            Y+ WD   +   +N+G RID+I++       L    
Sbjct: 393 PYTCWDQSRNRRQRNEGTRIDYILIDEMLLPALVPCG 429


>gi|288800479|ref|ZP_06405937.1| AP endonuclease domain protein [Prevotella sp. oral taxon 299 str.
           F0039]
 gi|288332692|gb|EFC71172.1| AP endonuclease domain protein [Prevotella sp. oral taxon 299 str.
           F0039]
          Length = 363

 Score = 57.5 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 43/275 (15%), Positives = 81/275 (29%), Gaps = 32/275 (11%)

Query: 4   VTVATWNVNSI--------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN- 54
           + V ++N+ S         R   + +  +I  +  DI+CLQE          E + +LN 
Sbjct: 100 LKVLSYNIQSFGYEPEDETRDEQNPIVQYIANSGADIVCLQE--APKWRIENEVVSTLNP 157

Query: 55  -YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY- 112
            Y  ++      +G  +    +   I T     D ++           N   L + N   
Sbjct: 158 IYPYQSEVAHETSGDVLALYSKYPIISTERIPFDSEINLSVAYRIKVDNDTILVVNNHLE 217

Query: 113 ---LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
              +   +                  + +S  L             +             
Sbjct: 218 SNKMTKADKAGFKNMVKGNISNSGTKQESSLLLNKLALAAQKRAVQVKAVVSVLKKYENL 277

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI--RIDHIM 227
               C       +   L  +  T         +     W Y+        G+  RID+I+
Sbjct: 278 PQIVCGDFNEWPNGYALNTLQKTLTNSFVETGNGA--GWSYHR------SGMYVRIDNIL 329

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
            S +       A++D++     K SDH P+   L+
Sbjct: 330 CSKQFKPY--KAKVDSEI----KTSDHYPIYCYLE 358


>gi|147799536|emb|CAN64031.1| hypothetical protein VITISV_037889 [Vitis vinifera]
          Length = 2193

 Score = 57.5 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/223 (10%), Positives = 53/223 (23%), Gaps = 4/223 (1%)

Query: 4   VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTED--KNFPFETLQSLNYHIET 59
           + + +WNV      ++   +  +I+    D+IC+QETK +    N             + 
Sbjct: 747 MKILSWNVRGANDSSKRKVIKTFIRNQRVDVICIQETKIQAMSDNIARSIGSGRFLGWKA 806

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
              +  +G  ++   +    V         +  RF             +  L+       
Sbjct: 807 VNVEGASGGILICWDKRSLEVLDWEEGQFTLSCRFRNVENGAKWXFTGVYGLFSKMEREA 866

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +        +              P   +    +          +         L+ 
Sbjct: 867 LWDELGAIRGLWEDPWCIGGDFNITLFPRERSSQRRMNSAMRKFAEVVDDLGLMDLPLQG 926

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR 222
            +            A           + W   +      +G R
Sbjct: 927 GEFTWNGGQNNQVWARLDRKWVIMEETHWRQLSREIWLKEGDR 969


>gi|119192056|ref|XP_001246634.1| hypothetical protein CIMG_00405 [Coccidioides immitis RS]
          Length = 551

 Score = 57.5 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 24/68 (35%), Gaps = 14/68 (20%)

Query: 3  VVTVATWNVNSIR-----------ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51
             + TWNVN IR                +   ++    DII LQE K + K+   + + 
Sbjct: 2  TFRLTTWNVNGIRNPFSYEPWRGTQSFQGMFDLLE---ADIIVLQELKIQRKDLRDDMVL 58

Query: 52 SLNYHIET 59
             +    
Sbjct: 59 VPGWDCFF 66


>gi|301057309|ref|ZP_07198427.1| endonuclease/exonuclease/phosphatase family protein [delta
           proteobacterium NaphS2]
 gi|300448539|gb|EFK12186.1| endonuclease/exonuclease/phosphatase family protein [delta
           proteobacterium NaphS2]
          Length = 258

 Score = 57.5 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/273 (15%), Positives = 76/273 (27%), Gaps = 24/273 (8%)

Query: 4   VTVATWNV------NSIRA---RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           + V T+N+      +   A   R   +   I+   PDI+  QE +          L  L+
Sbjct: 1   MRVMTFNLRFENDQDGANAWSCRRDLVVKLIERYAPDILGTQEGRISP-------LAYLD 53

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
            H+        + V   +   P           L+ +  ++  T  I+    R  +    
Sbjct: 54  AHLTKYDIHMPSRVIDKTCQYPTLFFRRDRFRILEGKEFWLSKTPGIH----RSKDWDSA 109

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
               +++   + + S     +         +   +   +             I+  +   
Sbjct: 110 FPRMVSTATLELRESGRIFSVAVTHLDHMGQTARLKQAEIISRWVREKTVPVILMGDFND 169

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
                  +       G +D  +         SF  +      K    RID I+ S     
Sbjct: 170 GPHSDAHAVLASSQTGLSDVWQVLGHAEGKESFTHHGFTGVPKKS--RIDWILSSKP--P 225

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPR 267
               AR+         PSDH P  V      P 
Sbjct: 226 YAVDARLLHDQFDGRYPSDHFPYYVDFTWKNPE 258


>gi|284039609|ref|YP_003389539.1| endonuclease/exonuclease/phosphatase [Spirosoma linguale DSM 74]
 gi|283818902|gb|ADB40740.1| Endonuclease/exonuclease/phosphatase [Spirosoma linguale DSM 74]
          Length = 299

 Score = 57.5 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/267 (14%), Positives = 76/267 (28%), Gaps = 32/267 (11%)

Query: 6   VATWNV------NSIRA---RIHNLAAWIKENNPDIICLQETKTEDKNF----PFETLQS 52
           VAT+N+      + I A   R  N+ A I+ +  D+   QE                   
Sbjct: 47  VATYNLRYNNKGDGINAWPNRKENVKALIRFHEFDLFGTQE--ALRDQLNDVAELNEFAF 104

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           L    +   +   +      K +   + +       +   +  +         +     +
Sbjct: 105 LGAGRDDGKEAGEHSAVFYRKDRFKPLQSGNF-WLSETPDKPGKGWDATCCNRICSWAKF 163

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                      +           R  S +L +E+    A +            P+I   D
Sbjct: 164 NDLKTKKDFYFFSVHFDHQGVEARRQSGKLMVEKIKEIAKN-----------TPVILVGD 212

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
              T +  Q       +     +          +F  +  D+   N   RID+I  S + 
Sbjct: 213 LNSTPDTEQVRTIKTLLNDAHDVTKMPPYGPEGTFNSFKFDAPMDN---RIDYIFTSKQF 269

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIV 259
              +    + T  +    PSDH PV+ 
Sbjct: 270 D--VLKYGVLTDAKEQRYPSDHQPVVA 294


>gi|86359644|ref|YP_471536.1| putative endonuclease/exonuclease/phosphatase protein [Rhizobium
           etli CFN 42]
 gi|86283746|gb|ABC92809.1| putative endonuclease/exonuclease/phosphatase protein [Rhizobium
           etli CFN 42]
          Length = 239

 Score = 57.5 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 12/63 (19%)

Query: 201 THHLYSFWDYYADSWSKNKGIR--IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVI 258
               YS+ D        + G R  +D+  +S      L SARIDT+  G    SDH PV 
Sbjct: 185 RPGSYSWMD------PADHGKRMHLDYCFVSCGLEGRLKSARIDTQSLG----SDHFPVW 234

Query: 259 VSL 261
           + +
Sbjct: 235 IEI 237


>gi|115904077|ref|XP_788597.2| PREDICTED: similar to bucentaur [Strongylocentrotus purpuratus]
 gi|115936086|ref|XP_001188674.1| PREDICTED: similar to bucentaur [Strongylocentrotus purpuratus]
          Length = 389

 Score = 57.5 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/271 (13%), Positives = 83/271 (30%), Gaps = 19/271 (7%)

Query: 6   VATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + TWNV ++    ++  L   +++   ++I + ET  ++            Y +    ++
Sbjct: 61  IGTWNVRTLNQDGKLDILLNQLEKFKWEVIGVSETHWKESG----DFTEGGYKVLCASEE 116

Query: 64  S-YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
             +     L   +  +                   T T     +++    +     +  T
Sbjct: 117 DVHRRGVALILNKQAQKALLGYNTISPRLISARFQTQTGALTIIQVYAPNMADREEMIDT 176

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
            YD     I          ++ +       D++                +     E   +
Sbjct: 177 FYDQLQQTIDDTPNKDILIVQGDLNAKVGRDWDT----WKNVIGHHGYGEMNNRGEKLLN 232

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F    N+   + +         +++     D  +KNK   ID +M++ +  S +  A   
Sbjct: 233 FCMANNLAIANTMFKQKKASREWTWES--PDGRTKNK---IDFVMVNNKWKSSVQCA--- 284

Query: 243 TKPRGWTKPSDHTPVIVSLDIPEPRKKQQDS 273
                    SDH  VI +  +    K +Q+ 
Sbjct: 285 RSFPSADVASDHQLVICNFKLRFKTKPKQNV 315


>gi|90419844|ref|ZP_01227753.1| endonuclease/exonuclease/phosphatase family protein [Aurantimonas
           manganoxydans SI85-9A1]
 gi|90335885|gb|EAS49633.1| endonuclease/exonuclease/phosphatase family protein [Aurantimonas
           manganoxydans SI85-9A1]
          Length = 248

 Score = 57.5 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/266 (14%), Positives = 76/266 (28%), Gaps = 41/266 (15%)

Query: 3   VVTVATWNVN-SI----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57
           +  VA++N+  S+    R R   +   + E + DI+ LQE          + L SL    
Sbjct: 1   MFRVASYNIRKSVGTDWRRRPKQILDVLTELDADIVALQEV----DRRLGDRLSSL---- 52

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
                 S   +A ++ ++PI                 +     +  +   +     P G 
Sbjct: 53  ------SPGLIAEMTHFRPIRFGVRPGSLGWHGNTILVRKDVELLRRKRLVLPALEPRGA 106

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
            +   +  D    +              +          + +P      ++  +   +  
Sbjct: 107 ALADLQIGDLKIRVVGMHLGLVGLWRKRQARAVLDQLASLEEPLP---TVMMGDLNQWNT 163

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
           E        ++        + H      SF                D I+ S      + 
Sbjct: 164 EGGCLAHFAEDHHVIAPGLSFHSQMPFVSF----------------DRIITS--LDIHVD 205

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +A + +  R     SDH PV   L +
Sbjct: 206 AAAVHSSERARL-ASDHLPVWADLSL 230


>gi|307702381|ref|ZP_07639338.1| hypothetical protein SMSK23_0224 [Streptococcus oralis ATCC
          35037]
 gi|307624058|gb|EFO03038.1| hypothetical protein SMSK23_0224 [Streptococcus oralis ATCC
          35037]
          Length = 59

 Score = 57.5 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 23/50 (46%), Gaps = 10/50 (20%)

Query: 4  VTVATWNVNSIRARI----------HNLAAWIKENNPDIICLQETKTEDK 43
          + + +WN++S+ A +            +   +   N DII +QETK   K
Sbjct: 1  MKLISWNIDSLNAALTSDSARAKLSQEVLQTLVAENADIIAIQETKLSAK 50


>gi|326798886|ref|YP_004316705.1| endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21]
 gi|326549650|gb|ADZ78035.1| Endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21]
          Length = 378

 Score = 57.5 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 47/278 (16%), Positives = 79/278 (28%), Gaps = 26/278 (9%)

Query: 2   SVVTVATWNVNSIR-----ARIH---NLAAWIKENNPDIICLQE--TK------TEDKNF 45
           S + V T+NV+  R      R      +   I   +PDI+C+QE  T+      +     
Sbjct: 111 SSIRVLTYNVHLFRKEDQDVRPKTKTAVTELILSVSPDIVCMQEFYTRKKGKYNSRQNMA 170

Query: 46  PFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT 105
           P   L    +H     +    G+ ILS+Y      +           R I A    N + 
Sbjct: 171 PALGLSYSYFHPVVENEYEAYGLIILSRYPIKNAGSIPNYQGKRTLNRAIYADIVKNGRA 230

Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165
            R+ N++L             K    + F        +     +    +    Q      
Sbjct: 231 FRVYNIHLQSIGFQPQDYAFVKDVKSRSFENDNVASTKRIGSRLKHAFFERSEQAKRIKE 290

Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225
            I                     +    +            +   Y   +   +   ID+
Sbjct: 291 EINRCRKPVIITGDFNDTPLSFAVHTVSSDLNNSFEKKGAGWGITYNGEFPNFQ---IDY 347

Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           I+ S      +   +I  K     K SDH  V   L +
Sbjct: 348 ILSSKTFE--VKHYQILKK-----KLSDHYAVWSDLSL 378


>gi|301760096|ref|XP_002915856.1| PREDICTED: 5'-tyrosyl-DNA phosphodiesterase-like, partial
           [Ailuropoda melanoleuca]
          Length = 366

 Score = 57.5 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 47/285 (16%), Positives = 80/285 (28%), Gaps = 59/285 (20%)

Query: 2   SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           SV +  TWNV+ +       RAR   + +++   NPD+I LQE        P        
Sbjct: 116 SVFSFITWNVDGLDLNNLQERAR--GVCSYLTLYNPDVIFLQEV------IPP------- 160

Query: 55  YHIETCGQKSYNGVAI-LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
           Y      + S   +     +     I+          Q         +    L +     
Sbjct: 161 YCSYLKKRASSYEIITGHEEGYFTAIMLKKSRVKFKSQEIIPFPNTKMMRNLLCVYASVS 220

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
            +   + ++  +      K  +      L+               Q       +I+  D 
Sbjct: 221 GNELCLMTSHLESTRGHAKERMNQFKTVLK-------------KMQEAPESATVIFAGDT 267

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG------IRIDHIM 227
                       L +             H  Y+ WD   +    N G      +R D I 
Sbjct: 268 NLRDHEVTKCGGLPSNILDVWEFLGKPKHCQYT-WDTQMNC---NLGIAPACKLRFDRIF 323

Query: 228 LSPEATSLLHSARIDT---KPRGWTK------PSDHTPVIVSLDI 263
                 +   S  I     +  G  K      PSDH  ++ +LD+
Sbjct: 324 ----FRTAAESGHIVPQSLELLGLEKLDCGRFPSDHWGLLCNLDV 364


>gi|194290013|ref|YP_002005920.1| hypothetical protein RALTA_A1916 [Cupriavidus taiwanensis LMG
           19424]
 gi|193223848|emb|CAQ69857.1| conserved hypothetical protein;
           Endonuclease/Exonuclease/phosphatase family [Cupriavidus
           taiwanensis LMG 19424]
          Length = 284

 Score = 57.5 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/303 (11%), Positives = 76/303 (25%), Gaps = 62/303 (20%)

Query: 4   VTVATWNV------NSIRARIHNLAAWIKE-NNPDIICLQET-------KTEDKNFPFET 49
           + + +WN+      +  R  +      ++   + D+ICLQE        + E        
Sbjct: 1   MELISWNIQWGRGADG-RVDLARQVDTLRAMADADVICLQEVTRGFTELRGEPGIDQVAE 59

Query: 50  LQSL--NYHIETCGQKSYNGVAILSKYQPIEIVTH---LPGDDLDVQARFIEATFTINTQ 104
           L +L   YH+               K     + T           +         ++   
Sbjct: 60  LTALLPGYHVLFASGVDRRDRNGAHKQFGNLVATRLPVREVFRHALPWPADPHVASMPRV 119

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLI--------------- 149
            L +     P    +  T  +   +  +     A +   ++                   
Sbjct: 120 ALEVTVEAGPRRLRVICTHLEYYSALQRAAQAEALRDWHVQACDHASRPGRSEKWPGPFT 179

Query: 150 ---------FAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHD 200
                      GD+N  P        +   +D   T            +           
Sbjct: 180 PEPRPAEAILCGDFNSKPDDIAYRRMLEPFDDTT-TPWRDAWLHAHPGLPHAPTCAIHDK 238

Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
                  W     +         D + ++    + +    ++         SDH P+++S
Sbjct: 239 EQ-----WPEPPFA--------CDFMFVTENLAARIRRCEVNADTAD----SDHQPILLS 281

Query: 261 LDI 263
           LD+
Sbjct: 282 LDL 284


>gi|147798345|emb|CAN70146.1| hypothetical protein VITISV_030351 [Vitis vinifera]
          Length = 1115

 Score = 57.5 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 22/38 (57%), Gaps = 2/38 (5%)

Query: 4   VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETK 39
           + + +WN   + ++     +  +++  NPD++ LQETK
Sbjct: 411 MKIISWNTRGLGSKKKRMVVKDFLRLQNPDVVMLQETK 448


>gi|326433631|gb|EGD79201.1| hypothetical protein PTSG_12954 [Salpingoeca sp. ATCC 50818]
          Length = 844

 Score = 57.5 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/221 (13%), Positives = 66/221 (29%), Gaps = 17/221 (7%)

Query: 3   VVTVATWNVNS-------IRARIHNLAAWIKENNPDIICLQETKTEDKNFPF-------- 47
           ++ +  WNV         I  R  ++A W+ +N  DI+CLQE K                
Sbjct: 2   MLHLVCWNVAGWATTVDCINRRHGDVATWLAKNKIDILCLQEVKVTASRLAEQPKLAGVT 61

Query: 48  -ETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
              L+  +     C   +  G   ++ +    +            A   E    +     
Sbjct: 62  PALLEKYDCFFSCCSAGTSRGFNGVATFARKGLTISADPQPFADHALDCEGRAIVTVHDG 121

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI-IPQPHDCYN 165
                     +   S +   K+ +++       +       ++  GD+NI        ++
Sbjct: 122 FAILNVYVPNDGAGSRRLPFKMRFLRAMEDCMQRLRNRGFKVLAVGDFNIGRRPEDISWD 181

Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYS 206
             I    +   +E+ ++         +    A   +H  + 
Sbjct: 182 HRILNVSSFMRMELPEADASRDERFLSSLFSAPCCSHCGWH 222



 Score = 44.0 bits (102), Expect = 0.023,   Method: Composition-based stats.
 Identities = 20/140 (14%), Positives = 38/140 (27%), Gaps = 9/140 (6%)

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDY--------NIIP 158
           R+               Y  +   IK         L      +   D          +  
Sbjct: 424 RVRLGQPCETRARAEHMYTFEKRVIKDDDGTGDAYLVRGADEMCIADIVECLDKIAGVSL 483

Query: 159 QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHH-LYSFWDYYADSWSK 217
                    ++         V+     L+  G  D   + +      ++  D Y +   +
Sbjct: 484 ADWQQRCLGMFALPISSPPCVQWLNTLLEKRGCVDVFTSCYPNAQARFTCHDQYKNRRYE 543

Query: 218 NKGIRIDHIMLSPEATSLLH 237
           NKG RID+I+L  +    + 
Sbjct: 544 NKGSRIDYIVLDGDWKHRVV 563


>gi|308067067|ref|YP_003868672.1| hypothetical protein PPE_00252 [Paenibacillus polymyxa E681]
 gi|305856346|gb|ADM68134.1| Conserved hypothetical protein [Paenibacillus polymyxa E681]
          Length = 273

 Score = 57.5 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/286 (13%), Positives = 75/286 (26%), Gaps = 39/286 (13%)

Query: 4   VTVATWNVNSIRAR--------IHNLAAWIKENNPDIICLQETKTEDKNFPF--ETLQSL 53
           + + T N +   A         +  LAA+I E   D+I LQE     +  P   + L + 
Sbjct: 1   MKLLTLNAH---AWMEENQHDKLKQLAAFIDEQQFDVIALQEVNQSMEETPLSPDDLGAY 57

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
            Y  +       +  A +      +             A++ E    ++   +       
Sbjct: 58  -YSADPEVGIKRDNYAYVLNGLLSDSYHWTWAPAHIGFAKYDEGLAILSKTPITATVNEY 116

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
                        KI  I+  +              +                       
Sbjct: 117 VSSLQDYDNYRSRKIVGIQTVVGGVQAWFVSGHYNWWND-------EESFRGLWDRTTKV 169

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG------------- 220
             +      F         +     +D      + D Y ++  +++G             
Sbjct: 170 LHSFAPTPVFMMGDFNNAAEVRGEGYDYVLQSGWSDTYPNAAVRDEGHTVIKAIAGWESN 229

Query: 221 ---IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              +RID I  +      + S+ +    +     SDH  V V L +
Sbjct: 230 AEPLRIDFIFSNKAV--QVQSSTVVLNGKTGRVVSDHFGVAVELKL 273


>gi|194292124|ref|YP_002008031.1| endonuclease/exonuclease/phosphatase [Cupriavidus taiwanensis LMG
           19424]
 gi|193226028|emb|CAQ71975.1| putative endonuclease/exonuclease/phosphatase [Cupriavidus
           taiwanensis LMG 19424]
          Length = 293

 Score = 57.5 bits (137), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/273 (14%), Positives = 75/273 (27%), Gaps = 53/273 (19%)

Query: 4   VTVATWNVNSIRA-------RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56
           +TV ++N++  RA       R   +AA + E + DI+ LQE                   
Sbjct: 43  MTVVSYNIH--RAVGTDRRYRPQRIAAVLAELDADIVALQEV------------------ 82

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                       +  S    +E +    G    V + F     T++     +        
Sbjct: 83  -----------ESGSSNDHTLEFLAGETGM--HVVSGFTRVRGTVDYGNALLTRFAPEAV 129

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
           N I  T    +       +   +         + A    + P         +    A   
Sbjct: 130 NQIDLTVKGCEPRGAIDAIVTCTASGCANPLRVIATHLGLRPGERRHQVQQLLNYVATAP 189

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYS----FWDYYADSWSKNKGIRIDHIMLSPEA 232
                    +               +  ++     +      ++      +D I +SP  
Sbjct: 190 PLPTILLGDVNEWFLWGRPLRWLHAYFEHTPHTATFPSRLPVFA------LDRIWVSPR- 242

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
            + L S      P      SDH P++   ++PE
Sbjct: 243 -AHLVSVASHRSPLARV-ASDHLPLVACFEVPE 273


>gi|327403697|ref|YP_004344535.1| Endonuclease/exonuclease/phosphatase [Fluviicola taffensis DSM
           16823]
 gi|327319205|gb|AEA43697.1| Endonuclease/exonuclease/phosphatase [Fluviicola taffensis DSM
           16823]
          Length = 264

 Score = 57.1 bits (136), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/263 (14%), Positives = 69/263 (26%), Gaps = 52/263 (19%)

Query: 4   VTVATWN--------VNSIRARIHNLAAWIKENNPDIICLQETK--TEDKNFPFETLQSL 53
           + + TWN        +NSI   +       +  + D+  L E +  +  +    E ++S 
Sbjct: 32  MKITTWNLQHGGGKRINSIITSLK------ENIDTDLFILTEFRNNSGSELLKRELIES- 84

Query: 54  NYHIET--CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
            Y          + N V I SK +             +           +   +  I   
Sbjct: 85  GYTCLYTVDCPPTVNSVLIASKTEFSSTS-------FEELEEHKNRIIKLENSSFTIYGC 137

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
           Y P                 K   +      +      F  +                  
Sbjct: 138 YFPLNEHKRKVFEFLLNEIDKNTTKNIIITGDYNTGKHFQDEKGATFIDSGY-------- 189

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
                        K +  G  D  R  +     YS++    + +      R+DH  +  +
Sbjct: 190 -----------LNKFEEKGLIDVWRNLNPDKKEYSWYSSAGNGF------RLDHFYIHSQ 232

Query: 232 ATSLLHSARIDTKPRGWTKPSDH 254
               + +   + K R   K SDH
Sbjct: 233 LNDQVVNCYYEHKYREN-KISDH 254


>gi|322421580|ref|YP_004200803.1| endonuclease/exonuclease/phosphatase [Geobacter sp. M18]
 gi|320127967|gb|ADW15527.1| Endonuclease/exonuclease/phosphatase [Geobacter sp. M18]
          Length = 258

 Score = 57.1 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 45/284 (15%), Positives = 83/284 (29%), Gaps = 55/284 (19%)

Query: 2   SVVTVATWNVNSIRARIHN---------LAAWIKENNPDIICLQET---KTEDK------ 43
              TV T+NV+    R+           +A  I    PDII LQE    ++  +      
Sbjct: 6   CTFTVMTYNVH----RLTGNDRHTSAARVAQVIDTYRPDIIALQELPGARSRPEVGGACQ 61

Query: 44  NFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
           +   E             ++   G  + S++    +     G   + + R +     +  
Sbjct: 62  DLAHELALLAPRENHYQMERERWGNVVFSRHPMRLVRAG--GLHPENRYRTMVPRGVLWV 119

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
           +    G         +  T  +                 E   P++  GD+N +P     
Sbjct: 120 EIDICGQKLQLVNTHLGLTPRERNYQAKVLAGPEWLAHPECRPPVLLCGDFNALPSWSIH 179

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223
                                 L +   +            ++F             +R 
Sbjct: 180 KR----------------LKNALMDEQESLKFGH-----TKFTFPSNLPI-------VRF 211

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPR 267
           DHI +SP+       + +  + +  T  SDH P+IV L +  P 
Sbjct: 212 DHIFISPDLA---VESELIPRTKLTTVASDHLPLIVKLRLACPE 252


>gi|257126278|ref|YP_003164392.1| endonuclease/exonuclease/phosphatase [Leptotrichia buccalis
           C-1013-b]
 gi|257050217|gb|ACV39401.1| Endonuclease/exonuclease/phosphatase [Leptotrichia buccalis
           C-1013-b]
          Length = 263

 Score = 57.1 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/273 (12%), Positives = 74/273 (27%), Gaps = 25/273 (9%)

Query: 4   VTVATWNVNSIRARIHN--------LAAWIKENNPDIICLQET-KTEDKNFPFETLQSLN 54
           + + T NV+   A +          LA  I E   D+I +QE  +  +    F+ ++  N
Sbjct: 1   MKILTVNVH---AWLEENQMEKIDILARTIAEKQYDVIAMQEVNQLMNNKIIFDDIREEN 57

Query: 55  Y-HIETCGQKSYNGVAILSKYQPIEIVTHLPGD----DLDVQARFIEATFTINTQTLRIG 109
           Y  +     + Y        +    I      +        + +  +  +    Q++R  
Sbjct: 58  YAWVLLETLQKYTDTDYYLHWSNSHIGFGKYNEGVAVITRHKIKAEDEFYCTFAQSVRTI 117

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
           +        I     D +       L         +                   +    
Sbjct: 118 SARRIVSITINYEGQDIEFYSCHMNLPNCETEDMGKNIQTILNRTQNSNLKILMGDFNTD 177

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
                   E   S          +              WD   +  +K    R+D+I  +
Sbjct: 178 AIGNVAAYENILSQGLFDTYVMAEKKDDGITVDKSIHGWD---NDKAKK---RLDYIFSN 231

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
            E    +  +++    +     SDH  + V ++
Sbjct: 232 KEL--KVKESKVIFNNKNKEIVSDHFGIEVKIE 262


>gi|62733010|gb|AAX95129.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
 gi|62733115|gb|AAX95232.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1324

 Score = 57.1 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/267 (12%), Positives = 66/267 (24%), Gaps = 46/267 (17%)

Query: 4   VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + +  WN   +     +  L    KE++PDI+ L  TK +                    
Sbjct: 448 MKIIAWNCRGLGNGPTVRGLLNLQKEDDPDILFLSNTKMDTNKL---------------- 491

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
                        Q       +P   +               + + +    +        
Sbjct: 492 -------------QCFRWKLGMPNLVVKDCQGKSGGLAVFWKKEINLRLRTVSRLFMDVD 538

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
              DD   W    +    +  + +         N              E    +  E   
Sbjct: 539 VMEDDGFWWRFTGVYGEPRSDKKDLTWKALRTLNATKGELWLCVGDFNEVLFSWEKERGH 598

Query: 182 SFQKLQNMGFTDAIRAT-----HDTHHLYSF---WDYYADSWSKNKGIRIDHIMLSPEAT 233
           +  +     F   +          T   +++   W        +    R+D  +   +  
Sbjct: 599 AKAQSCMDRFRQTLDCCSLSNLGFTGDPFTWRNNWCVRDGYIRE----RLDRAVADSDWC 654

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVS 260
               S R+     G  + SDH PVIV+
Sbjct: 655 CRFPSFRVRK---GDPRHSDHHPVIVT 678


>gi|241661977|ref|YP_002980337.1| endonuclease/exonuclease/phosphatase [Ralstonia pickettii 12D]
 gi|240864004|gb|ACS61665.1| Endonuclease/exonuclease/phosphatase [Ralstonia pickettii 12D]
          Length = 248

 Score = 57.1 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/276 (12%), Positives = 82/276 (29%), Gaps = 46/276 (16%)

Query: 1   MSVVTVATWNVN----SI--RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           M  + VAT+N++     I  R R+H++   +   + DI+ LQE +  +       L   N
Sbjct: 1   MLRLRVATYNIHKGVTGIARRVRVHDVRQGLHTMDADIVFLQEVQDRNDRLVAAELFDPN 60

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           Y        +         Y       +   +        +     + ++ L I +    
Sbjct: 61  Y--------TQLRYLATDVYPHTVYGRNAVYEHGHHGNAILSRFPILLSENLDISDHRFE 112

Query: 115 HGNPITSTKY--DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD---CYNPIIW 169
               + +       ++  +       ++  + +   +     +++P         +   W
Sbjct: 113 QRGLLHAVTDLGFGEVHLLCAHFGLFARSRQRQAEALVDRVRSVVPPDAPLVVAGDFNDW 172

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
            N     +       ++ +         T  +   +               +R+D I + 
Sbjct: 173 NNRLDRMICQALGATEVADKAADARPVRTFPSQMPW---------------LRLDRIYV- 216

Query: 230 PEATSLLHSARIDTKP----RGWTKPSDHTPVIVSL 261
                      I+       R W + SDH P++  L
Sbjct: 217 -------RGFDIERAHALTGREWAQRSDHVPLLAEL 245


>gi|325954373|ref|YP_004238033.1| endonuclease/exonuclease/phosphatase [Weeksella virosa DSM 16922]
 gi|323436991|gb|ADX67455.1| Endonuclease/exonuclease/phosphatase [Weeksella virosa DSM 16922]
          Length = 320

 Score = 57.1 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 41/259 (15%), Positives = 78/259 (30%), Gaps = 42/259 (16%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64
            VA+ N+ S  + ++ L  +I +   D++ LQE  T+ +N          Y+ E     +
Sbjct: 103 KVASVNIYSQNSDVYTLMQFINKEKADLVLLQEVTTKWQNNLDNLRTLYPYYHEEVRDNN 162

Query: 65  YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124
           +             +V +   D                  T+ +G   +           
Sbjct: 163 FGIALYSRYPIDSLVVKNYIDDRHPSLWA-----------TISVGEKKIQVLGTHPVPPL 211

Query: 125 DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ 184
            ++  + KR L+    + ++                   +  I+   D   TL      +
Sbjct: 212 PNQARFEKRNLQLELMKKDI---------------EESDHENILLVGDLNCTLFSPNINK 256

Query: 185 KLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK 244
              +      +            W+ +   +  N    IDHI +S           +   
Sbjct: 257 IKNDKLKDARLGFGFQNS-----WNAFVPIFRTN----IDHIWVSKNIK-------VTNF 300

Query: 245 PRGWTKPSDHTPVIVSLDI 263
            RG    SDH P+I  L I
Sbjct: 301 YRGDFIESDHFPIIAELKI 319


>gi|295135375|ref|YP_003586051.1| endonuclease/exonuclease/phosphatase family protein [Zunongwangia
           profunda SM-A87]
 gi|294983390|gb|ADF53855.1| endonuclease/exonuclease/phosphatase family protein [Zunongwangia
           profunda SM-A87]
          Length = 258

 Score = 57.1 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 43/276 (15%), Positives = 78/276 (28%), Gaps = 33/276 (11%)

Query: 1   MSVVTVATWNV---------NSIRARIHNLAAWIKEN----NPDIICLQETKTEDKNFPF 47
            S V + T+N+         NS   R      WI        PDI  +QE         +
Sbjct: 2   FSQVKLMTYNIKYANENDAENSWSYRK----DWITSQIKFYEPDIFGVQE--ALQVQIDY 55

Query: 48  ETLQSLNY-HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
            +    NY HI              + +   E    L  +   +     +     +    
Sbjct: 56  FSEHMPNYKHIGVGRDDGMKKGEYSAIFYNSEKFKVLKNNTFWLNETPTKIKKGWDAALP 115

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
           RI    L          +     +    ++   +  +L    I   +    P        
Sbjct: 116 RICTYGLFENKKTGEKFWYFNTHFDHVGVKARQESAKLIFEKITELNTQDYPVVLSGDFN 175

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226
           ++ +  +   L  +    K                        Y   ++S+    RID++
Sbjct: 176 LMPDTKSIQYLSEQMIDAKGAADLVFGPEG------------TYNGFNFSEPVTRRIDYV 223

Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
            LS      +    + +  +    PSDH PV+V L+
Sbjct: 224 FLSNN-GFQVKKYAVLSDSKDLKYPSDHLPVMVELE 258


>gi|74004148|ref|XP_535904.2| PREDICTED: similar to TRAF and TNF receptor-associated protein
           [Canis familiaris]
          Length = 353

 Score = 57.1 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 44/285 (15%), Positives = 79/285 (27%), Gaps = 59/285 (20%)

Query: 2   SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           S+ +  TWNV+ +       RAR   + +++   +PD++ LQE        P        
Sbjct: 103 SMFSFITWNVDGLDLNNLQERAR--GVCSYLTLYSPDVVFLQEV------IPP------- 147

Query: 55  YHIETCGQKSYNGVAI-LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
           Y      +     +     +     I+          Q         +    L +     
Sbjct: 148 YCSYLKKRAHSYEIITGHEEGYFTAIMLKKSRVKFKSQEIIPFPNTKMMRNLLCVYASIS 207

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
            +   + ++  +      K  +      L+               Q       +I+  D 
Sbjct: 208 GNELCLMTSHLESTRGHAKERMNQLKMVLK-------------KMQEAPESATVIFAGDT 254

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG------IRIDHIM 227
                       L +             H  Y+ WD   +S   N G      +R D I 
Sbjct: 255 NLRDHEVTKCGGLPSNILDVWEFLGKPKHCQYT-WDTQMNS---NLGISATCKLRFDRIF 310

Query: 228 LSPEATSLLHSARIDT---KPRGWTK------PSDHTPVIVSLDI 263
                 +   S  I        G  K      PSDH  ++ +LD+
Sbjct: 311 ----FRTAAESGHIVPQSLDLLGLEKLDCGRFPSDHWGLLCNLDV 351


>gi|332041904|gb|EGI78248.1| endonuclease/exonuclease/phosphatase [Hylemonella gracilis ATCC
           19624]
          Length = 264

 Score = 57.1 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 39/288 (13%), Positives = 91/288 (31%), Gaps = 69/288 (23%)

Query: 2   SVVTVATWNVN----SI----RARIHNLAAWIKENNPDIICLQETK----------TEDK 43
           + + VAT+N++     +    R  IHNL+  +++ + DI+CLQE +          +   
Sbjct: 22  ATLRVATYNIHKGVLGLGPRRRLEIHNLSLAVEQLDADIVCLQEVRKLNHREAAHFSRWP 81

Query: 44  NFP-FETLQSLNYHIET----CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT 98
             P  + L    Y          +   +G A+LS++  +        D    Q   +   
Sbjct: 82  ELPQADYLAPEGYEAIYRTNAYTRHGEHGNAMLSRWPVLSAGHEDMSDHRFEQRGLLHGV 141

Query: 99  FTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP 158
            +++ Q++ +  ++L         +      +I+R +   +  +   +   +    +   
Sbjct: 142 VSVHGQSVHVLVVHLGLIRASRVRQAAQLDQYIRREIPTEAPLIVAGDFNDWGERVH--- 198

Query: 159 QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN 218
                                 +   +           A                     
Sbjct: 199 ------------------RHFERMGLQTCEPAAHPTFPARLPLVQ--------------- 225

Query: 219 KGIRIDHIMLSPEATS-LLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
               +D++ +    T   +    +  + R W + SDH P+I    +P+
Sbjct: 226 ----LDYVYV-RGLTPLRV----VVPRGRAWWRMSDHLPLIAEFTLPQ 264


>gi|115803132|ref|XP_001198853.1| PREDICTED: similar to endonuclease-reverse transcriptase
           [Strongylocentrotus purpuratus]
 gi|115943868|ref|XP_001196835.1| PREDICTED: similar to endonuclease-reverse transcriptase
           [Strongylocentrotus purpuratus]
          Length = 1030

 Score = 57.1 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/270 (12%), Positives = 82/270 (30%), Gaps = 19/270 (7%)

Query: 6   VATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + TWNV ++    ++  L   +++   ++I + ET  ++            Y +    ++
Sbjct: 61  IGTWNVRTLNQDGKLDILLNQLEKFKWEVIGVSETHWKESG----DFTEGGYKVLCASEE 116

Query: 64  S-YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
             +     L   +  +                   T       +++    +     +  T
Sbjct: 117 DVHRRGVALILNKQAQKALLGYNTISPTLISARFQTQAGALTIIQVYAPNMADREEMIDT 176

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
            YD     I          ++ +       D++                +     E   +
Sbjct: 177 FYDQLQQTIDDTPNKDILIVQGDLNAKVGRDWDT----WKNVIGHHGYGEMNNRGEKLLN 232

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F    N+   + +         +++     D  +KNK   ID +M++ +  S +  A   
Sbjct: 233 FCMANNLAIANTMFKQKKASRAWTWES--PDGRTKNK---IDFVMVNNKWKSSVQCA--- 284

Query: 243 TKPRGWTKPSDHTPVIVSLDIPEPRKKQQD 272
                    SDH  VI +  +    K +Q+
Sbjct: 285 RSFPSADVASDHQLVICNFKLRFKTKPKQN 314


>gi|124808986|ref|XP_001348459.1| exodeoxyribonuclease III, putative [Plasmodium falciparum 3D7]
 gi|23497353|gb|AAN36898.1|AE014820_48 exodeoxyribonuclease III, putative [Plasmodium falciparum 3D7]
          Length = 876

 Score = 57.1 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 40/118 (33%), Gaps = 11/118 (9%)

Query: 1   MSVVTVATWNVNS-------IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFE----T 49
           M  + +A+WNVN        I+    +L  ++K+ + DI+CLQETKT +     +     
Sbjct: 1   MEKIGLASWNVNGWKKSCEIIKRNDDDLVQFLKKLDIDILCLQETKTNESVIENDCNLLE 60

Query: 50  LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107
             S  Y       K   G      Y  +          +       +         ++
Sbjct: 61  ADSNMYESYWTCCKKKKGDKTHKGYSGLATYVKNENKIICSTNNVFDDFSFFFNDYIK 118



 Score = 44.8 bits (104), Expect = 0.014,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 34/108 (31%), Gaps = 2/108 (1%)

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            KY  K +   +++      + L+         NI    HD  N      +         
Sbjct: 538 CKYKYKNNINGQYMVKNPNCIYLKHLNDIFISLNINLSEHDLLNIANSIGEPSSPPCCVD 597

Query: 182 SFQK-LQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIM 227
             +  +      D     H   +  ++ WD Y      N+G RID+I 
Sbjct: 598 IIKNLIYEDNMIDTFSFFHPNVNGKFTCWDTYRQCRVHNEGSRIDYIF 645


>gi|70949281|ref|XP_744066.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56523858|emb|CAH80801.1| hypothetical protein PC000247.04.0 [Plasmodium chabaudi chabaudi]
          Length = 53

 Score = 57.1 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 7/50 (14%)

Query: 1  MSVVTVATWNVNSIRA----RIHN---LAAWIKENNPDIICLQETKTEDK 43
          M  + + +WNVN  +        N   +  ++++ + DI+CLQETKT D 
Sbjct: 1  MEKLHIVSWNVNGWKKSCEIIKKNGISVEDFLEKLDIDILCLQETKTNDG 50


>gi|87306888|ref|ZP_01089034.1| hypothetical protein DSM3645_00505 [Blastopirellula marina DSM
           3645]
 gi|87290261|gb|EAQ82149.1| hypothetical protein DSM3645_00505 [Blastopirellula marina DSM
           3645]
          Length = 253

 Score = 57.1 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 67/254 (26%), Gaps = 23/254 (9%)

Query: 9   WNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGV 68
           WN+     R   +   I+  + D++  QE     + +  E L   + +  +   K   G 
Sbjct: 17  WNI-----RKPLVIETIERYDSDLLGTQECLPFQEAYLREKLPQYDCYAVSREGKGTAGE 71

Query: 69  AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKI 128
                Y+         G     +      + + ++   RI   ++   +  +   +    
Sbjct: 72  ECAIFYRKSRFELLDQGSIALSETPEKIGSVSWDSSLPRI-ASWVKLRDKQSGHAFTFWN 130

Query: 129 SWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN 188
           +        +                   P            +     L           
Sbjct: 131 THFDHRGPKSRTEAAKLLVDQMKATTESGPVVLTGDFNADAGSSPHQALATYLRDSWKSA 190

Query: 189 MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGW 248
                A          ++ W        K+KG RID I  S         + ID      
Sbjct: 191 KWEGSAWT--------FNGWS------DKSKGARIDWIFHSQGF--QATDSTIDRWKSDQ 234

Query: 249 TK-PSDHTPVIVSL 261
            + PSDH PV  +L
Sbjct: 235 GRYPSDHCPVTTTL 248


>gi|297171763|gb|ADI22754.1| metal-dependent hydrolase [uncultured Rhizobium sp. HF0500_29J11]
          Length = 248

 Score = 57.1 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 38/266 (14%), Positives = 76/266 (28%), Gaps = 41/266 (15%)

Query: 3   VVTVATWNVN-SI----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57
           +  VA++N+  S+    R R   +   + E + DI+ LQE          + L SL    
Sbjct: 1   MFRVASYNIRKSVGTDWRRRPKQILDVLTELDADIVALQEV----DRRLGDRLSSL---- 52

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
                 S   +A ++ ++PI                 +     +  +   +     P G 
Sbjct: 53  ------SPGLIAEMTHFRPIRFGVRPGSLGWHGNTILVRKDVELLRRKRLVLPALEPRGA 106

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
            +   +  D    +              +          + +P      ++  +   +  
Sbjct: 107 ALADLQIGDLKIRVVGMHLGLVGLWRKRQARAVLDQLASLEEPLP---TVMMGDLNQWNT 163

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
           E        ++        + H      SF                D I+ S      + 
Sbjct: 164 EGGCLAHFAEDHHVIAPGLSFHSQMPFVSF----------------DRIITS--LDIHVD 205

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +A + +  R     SDH PV   L +
Sbjct: 206 AAAVHSSERARL-ASDHLPVWADLSL 230


>gi|187927447|ref|YP_001897934.1| endonuclease/exonuclease/phosphatase [Ralstonia pickettii 12J]
 gi|309779851|ref|ZP_07674606.1| endonuclease/exonuclease/phosphatase [Ralstonia sp. 5_7_47FAA]
 gi|187724337|gb|ACD25502.1| Endonuclease/exonuclease/phosphatase [Ralstonia pickettii 12J]
 gi|308921428|gb|EFP67070.1| endonuclease/exonuclease/phosphatase [Ralstonia sp. 5_7_47FAA]
          Length = 248

 Score = 57.1 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/276 (13%), Positives = 84/276 (30%), Gaps = 46/276 (16%)

Query: 1   MSVVTVATWNVN----SI--RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           M  + VAT+N++     I  R R+H++   +   + DI+ LQE +  +       L   N
Sbjct: 1   MLRLRVATYNIHKGVTGIARRVRVHDVRQGLHSMDADIVFLQEVQDRNDRLVAAELFDPN 60

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           Y        +         Y       +   +        +     + ++ L I +    
Sbjct: 61  Y--------TQLRYLATDVYPHTVYGRNAVYEHGHHGNAILSRFPILLSENLDISDHRFE 112

Query: 115 HGNPITSTKY--DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD---CYNPIIW 169
               + +       ++  +       ++  + +   +     +++P         +   W
Sbjct: 113 QRGLLHAVTDLGFGEVHLLCAHFGLFARSRQRQAEALVDRVRSVVPPDAPLVVAGDFNDW 172

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
            N    T+       ++ +         T  +H  +               +R+D I + 
Sbjct: 173 NNRLDRTICQALGATEVADKAANARPVRTFPSHMPW---------------LRLDRIYV- 216

Query: 230 PEATSLLHSARIDTKP----RGWTKPSDHTPVIVSL 261
                      I+       R W + SDH P++  L
Sbjct: 217 -------RGFDIERAHALTGREWAQRSDHVPLLAEL 245


>gi|329961876|ref|ZP_08299890.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           fluxus YIT 12057]
 gi|328531316|gb|EGF58160.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           fluxus YIT 12057]
          Length = 662

 Score = 57.1 bits (136), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 40/284 (14%), Positives = 72/284 (25%), Gaps = 37/284 (13%)

Query: 2   SVVTVATWNVN--SI---RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56
           +++ V  WN+    I         +   I+    D++ +QE              SL YH
Sbjct: 393 NIIKVLQWNIWHGGIHLGNEGQQRVLDLIRSTRADVVMMQE----AYGIQRMLADSLGYH 448

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
           ++T      N                    +             +    LR         
Sbjct: 449 LKT-HSLKDNLAMYSRFPLETIAWREPFKSNPAKITLPNGKRVMLIDCWLRYAYRPEYTS 507

Query: 117 NPITSTKYDDKI----------SWIKRFLRFASQRLELEEPLIFAGDYN-IIPQPHDCYN 165
                                      + +     LE   P+I  GD+N           
Sbjct: 508 GYAEKGLDPSVWIAEDSILALPDIQNIYTKDIVPNLETGMPVIITGDFNSCSHLDWTERA 567

Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG----I 221
             + +    +        + +Q  GF D+ R  +          Y   + +   G     
Sbjct: 568 KPLHQG---YGPVNFPVSRYMQENGFKDSFREKNPDEV-----TYQGGTVAAIYGQMQMS 619

Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTK--PSDHTPVIVSLDI 263
           RID I    +      S++I            SDH  V+   ++
Sbjct: 620 RIDFIYYKGKL--KALSSKIVRTAPEIDYVWASDHAAVLTVFEV 661


>gi|225431681|ref|XP_002264011.1| PREDICTED: similar to glucose-inhibited division A family protein
          [Vitis vinifera]
          Length = 490

 Score = 56.7 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 20/38 (52%), Gaps = 2/38 (5%)

Query: 4  VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETK 39
          + +  WN   + +R     +  +++   PDI+ +QETK
Sbjct: 1  MKIINWNTRGLGSRKKRRVVKEFLRSEKPDIVMIQETK 38


>gi|194223065|ref|XP_001497667.2| PREDICTED: similar to TRAF and TNF receptor-associated protein,
           partial [Equus caballus]
          Length = 333

 Score = 56.7 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 45/285 (15%), Positives = 80/285 (28%), Gaps = 59/285 (20%)

Query: 2   SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           S+ +  TWN++ +       RA    + +++   +PD+I LQE        P        
Sbjct: 83  SMFSFITWNIDGLDPNNLQERA--QGVCSYLALYSPDVIFLQEV------IPP------- 127

Query: 55  YHIETCGQKSYNGVAIL-SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
           Y+     + S   +     +     I+          Q         +    L +     
Sbjct: 128 YYSYLKKKASSYEIITGNEEGYFTAIMLKKSRVKFKSQEIIPFPDTKMMRNLLCVHVSVS 187

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
            +   + ++  +      K  +      L+               Q       II+  D 
Sbjct: 188 GNELFLMTSHLESTRGHAKERINQLKMVLK-------------KIQEAPESATIIFAGDT 234

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG------IRIDHIM 227
               +       L N             H  Y+ WD   +S   N G      +R D I 
Sbjct: 235 NLRDQEVTKCGGLPNNILDVWEFLGKPKHCQYT-WDTQMNS---NLGIPATCKLRFDRIF 290

Query: 228 LSPEATSLLHSARIDT---KPRGWTK------PSDHTPVIVSLDI 263
                 +      I        G  K      PSDH  ++ +LD+
Sbjct: 291 ----FRAAAGDGHIIPRSLDLLGLEKLDCGRFPSDHWGLLCNLDV 331


>gi|154493449|ref|ZP_02032769.1| hypothetical protein PARMER_02788 [Parabacteroides merdae ATCC
           43184]
 gi|154086659|gb|EDN85704.1| hypothetical protein PARMER_02788 [Parabacteroides merdae ATCC
           43184]
          Length = 292

 Score = 56.7 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/269 (13%), Positives = 73/269 (27%), Gaps = 25/269 (9%)

Query: 2   SVVTVATWNV------NSIRA---RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52
           S + VAT+N+      + + A   R   +   I+ ++ DI   QE     K+      + 
Sbjct: 34  SELNVATFNLRMDTEKDGVNAWPNRKEMVKGLIRFHDFDIFGTQE---GFKHMLDGVAEL 90

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
             Y     G+         S          L        +                 N  
Sbjct: 91  DGYAYIGAGRDDGEDAGEHSAIFYKTSRFDLLDKGNFWFSE--TPDVPGKGWDATCCNRI 148

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
              G             +   +             L+ A    I       +    +   
Sbjct: 149 CSWGKFRDKESGKVFYFFNSHYDHQGKVARRESSKLLIARIKQIAGTDATVFATGDFNAV 208

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI--RIDHIMLSP 230
                 V  +   L    +  + +  + T   Y       +S+  +  +  RID+I ++ 
Sbjct: 209 PTDEPMVTLASDGLLLDSYDLSEQPRYGTEGTY-------NSFKTDSEMMNRIDYIWVTK 261

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIV 259
              + +    +    +    PSDH PV++
Sbjct: 262 G--TKVKKYAVLNDMQYGRFPSDHFPVMI 288


>gi|147798966|emb|CAN68165.1| hypothetical protein VITISV_008538 [Vitis vinifera]
          Length = 1765

 Score = 56.7 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/258 (12%), Positives = 73/258 (28%), Gaps = 31/258 (12%)

Query: 5   TVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
            + +WN   + +R     +  +++   PDI+ +QETK                      +
Sbjct: 113 KIISWNTRGLGSRKKRRVVKDFLRSEKPDIVMIQETK----------------------K 150

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
              +   + S +        +           +            +   +          
Sbjct: 151 AECDRRFVGSVWTARNKEWAVLPACGASGGILVIWDSKKLHSEEVVLGSFSVSVKFAVDG 210

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                JS +      A ++    E     G  +        +N I   ++      +  S
Sbjct: 211 SEQFWJSAVYGPNSTALRKDFWVELSDIFGLSSPCWCVGGDFNVIRRCSEKLGGGRLTPS 270

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
            + L +    + +         +++ +       K    R+D  + S E   L   +  +
Sbjct: 271 MKDLDDFIRENELIDPPLRSASFTWSNMQEHPVCK----RLDRFLYSNEWEQLFPQSLQE 326

Query: 243 TKPRGWTKPSDHTPVIVS 260
             PR     SDH P+++ 
Sbjct: 327 VLPR---WTSDHWPIVLE 341


>gi|113868345|ref|YP_726834.1| metal-dependent hydrolase [Ralstonia eutropha H16]
 gi|113527121|emb|CAJ93466.1| Metal-dependent hydrolase [Ralstonia eutropha H16]
          Length = 284

 Score = 56.7 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 42/302 (13%), Positives = 86/302 (28%), Gaps = 60/302 (19%)

Query: 4   VTVATWNVNSIRARIHNL-----AAWIKE-NNPDIICLQET-------KTE--DKNFPFE 48
           + + +WN+   R    ++        ++   + D+ICLQE        +    +      
Sbjct: 1   MELISWNIQWGRGADGHVDLGRQVDTLRGIADADVICLQEVTRGFGELRGSPGEDQVTEL 60

Query: 49  TLQSLNYHIETCG---------QKSYNGVAILSKYQPIEIVTHLPGDDLD-----VQARF 94
           T     YH+              +   G  I ++    E+  H      D     +    
Sbjct: 61  TALLPGYHLLYAPGVDRRTATGGRKQFGNLIATRLPVREVFRHALPWPADPQVASMPRVA 120

Query: 95  IEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLI----- 149
           +EA+  ++T+ LR+   +L + +        + +          ++R    E        
Sbjct: 121 LEASVEVSTRRLRVICTHLEYYSSHQRAAQAEALRTWHAEACDHARRPGRSEKWPGPFTP 180

Query: 150 --------FAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT 201
                     GD+N  P        +   +DA                            
Sbjct: 181 EPRPAEAVLCGDFNSKPDDIAYRRVLEPFDDAT-PPWRDAWLHTHPGQPHAPTCALYDKE 239

Query: 202 HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
                 W     +         D + ++      +    +D      T  SDH P+++SL
Sbjct: 240 Q-----WPEPPFA--------CDFMFVTENLAGRIRRCEVDAD----TASSDHQPILLSL 282

Query: 262 DI 263
           D+
Sbjct: 283 DL 284


>gi|147790107|emb|CAN61039.1| hypothetical protein VITISV_018673 [Vitis vinifera]
          Length = 1941

 Score = 56.7 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/246 (15%), Positives = 77/246 (31%), Gaps = 28/246 (11%)

Query: 15   RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKY 74
            R +   + A I+    D+ CLQETK +D                          ++    
Sbjct: 1118 RVKRKVIKALIRSQRADLACLQETKIQD-------------------MSRRIVHSLGVGK 1158

Query: 75   QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRF 134
                      G    V   +      +    + + ++     N      +     +    
Sbjct: 1159 FLGWGAMSARGAAGGVVVFWDNRVLELVGMEVSLFSILCCFKNCEDGFLWTFTGVYGPTM 1218

Query: 135  LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDA 194
             R+    L  EE     G +         +N + + N+      + +S ++   +    A
Sbjct: 1219 KRYRE--LFWEELGAIRGLWPDPWCIGGDFNVVRFPNERSRERRLTESMRRFFEVIEELA 1276

Query: 195  IRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDH 254
            +R       L++ W    +  S+    R+D  ++S +  +    A   + PR     SDH
Sbjct: 1277 LRDLPLHGGLFT-WSGGMNGLSR---SRLDCFLISEDWENHFSGAIQCSLPR---PVSDH 1329

Query: 255  TPVIVS 260
             P+++ 
Sbjct: 1330 FPILLD 1335


>gi|134295849|ref|YP_001119584.1| endonuclease/exonuclease/phosphatase [Burkholderia vietnamiensis
           G4]
 gi|134139006|gb|ABO54749.1| Endonuclease/exonuclease/phosphatase [Burkholderia vietnamiensis
           G4]
          Length = 284

 Score = 56.7 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 42/302 (13%), Positives = 79/302 (26%), Gaps = 61/302 (20%)

Query: 4   VTVATWNV------NSI----R--ARIHNLAAWIKENNPDIICLQE-TKT--------ED 42
           + +  WN+      + +    R  A    L  +      D++CLQE T+           
Sbjct: 1   MRLIDWNIQWGRDADGVVDLPRTVAAARRLGDF------DVLCLQEVTRGFGALPGGPGP 54

Query: 43  KNFPFETLQSLNYHI-----------ETCGQKSYNGVAILSKYQPIEIVTHLPGDD---- 87
             F         Y I           E    +   G AI ++     ++  L        
Sbjct: 55  DQFAELAALLPGYTIVDAIGADLPALEPGAPRRQFGNAIATRLPVGRVLRQLLPWPADAD 114

Query: 88  -LDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEE 146
              +    +E      +  +R+   +L   +        D +    R     +      E
Sbjct: 115 APSMPRVALEVELLAPSGPVRVVTTHLEFYSARQRLAQVDALRARHREACAHADHPAPAE 174

Query: 147 PLIFAGDYNIIPQPHDCYNPIIWENDA----CFTLEVRQSFQKLQNMGFTDAIRATHDTH 202
                      P+            D+         +  +   +         R    T 
Sbjct: 175 NATGPFSATAQPRDAIVCGDFNSAFDSDAYRRMLEPIADAPSFVDAWVARHPGRTPPPTA 234

Query: 203 HLY-S-FWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
            +Y +  W     +         D + ++      +    ID   R     SDH PV++ 
Sbjct: 235 GVYDTVQWSDGPLA--------CDFVFVTETLLPRVTRCEIDGDVR----ASDHQPVVLE 282

Query: 261 LD 262
           LD
Sbjct: 283 LD 284


>gi|228937659|ref|ZP_04100296.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|228970548|ref|ZP_04131198.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228977118|ref|ZP_04137519.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis Bt407]
 gi|228782566|gb|EEM30743.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis Bt407]
 gi|228789135|gb|EEM37064.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228822033|gb|EEM68024.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|326938155|gb|AEA14051.1| exodeoxyribonuclease III [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 263

 Score = 56.7 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/271 (13%), Positives = 65/271 (23%), Gaps = 19/271 (7%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET--KTEDKNFP----FETLQS 52
           + + T N +S +      +I  LA  I+E   D+I LQE     + +N       +    
Sbjct: 1   MKLLTLNCHSWQEENQIEKIKYLAKVIQEEEYDVIALQEVSQSIQAENVCGNKKEDNFGL 60

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           L              +     +   ++                +  F    +        
Sbjct: 61  LLLEELKALHVKDYNITWDFSHIGYDVYEEGLAIITKHNIIKEDTFFISENEDTTYWKTR 120

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                 I     D              +     +     G  +         +       
Sbjct: 121 KIVSTTIAYNGKDITFYSCHLGWWNDEEESFKGQINRLMGRVDSNKLAFLMGDFNNNARL 180

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                E           G               + WD           +RID I+ +   
Sbjct: 181 EGEGYEYMMQKGLYDTYGLAIEKDEGTTVQGEIAGWD------ENKHNLRIDLILCNQS- 233

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              +HS+++          SDH  V V LDI
Sbjct: 234 -KKVHSSKVIFNGTNRNVISDHFGVEVQLDI 263


>gi|159045260|ref|YP_001534054.1| putative endonuclease/exonuclease/phosphatase [Dinoroseobacter
           shibae DFL 12]
 gi|157913020|gb|ABV94453.1| putative endonuclease/exonuclease/phosphatase [Dinoroseobacter
           shibae DFL 12]
          Length = 375

 Score = 56.7 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 21/75 (28%)

Query: 207 FWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA-RIDTKPR---------------GWTK 250
           +  YYA   SK +   +D+++ SP   + + S   I                    GW +
Sbjct: 304 WTHYYAGGRSKTQ---LDYVIASPALAARVRSTPEIIRTGMPQRVPNLDTPRYPRIGWDR 360

Query: 251 P--SDHTPVIVSLDI 263
           P  SDH PV+V  DI
Sbjct: 361 PKASDHCPVVVEFDI 375


>gi|108864082|gb|ABA91837.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1301

 Score = 56.7 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/267 (12%), Positives = 66/267 (24%), Gaps = 46/267 (17%)

Query: 4   VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + +  WN   +     +  L    KE++PDI+ L  TK +                    
Sbjct: 425 MKIIAWNCRGLGNGPTVRGLLNLQKEDDPDILFLSNTKMDTNKL---------------- 468

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
                        Q       +P   +               + + +    +        
Sbjct: 469 -------------QCFRWKLGMPNLVVKDCQGKSGGLAVFWKKEINLRLRTVSRLFMDVD 515

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
              DD   W    +    +  + +         N              E    +  E   
Sbjct: 516 VMEDDGFWWRFTGVYGEPRSDKKDLTWKALRTLNATKGELWLCVGDFNEVLFSWEKERGH 575

Query: 182 SFQKLQNMGFTDAIRAT-----HDTHHLYSF---WDYYADSWSKNKGIRIDHIMLSPEAT 233
           +  +     F   +          T   +++   W        +    R+D  +   +  
Sbjct: 576 AKAQSCMDRFRQTLDCCSLSNLGFTGDPFTWRNNWCVRDGYIRE----RLDRAVADSDWC 631

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVS 260
               S R+     G  + SDH PVIV+
Sbjct: 632 CRFPSFRVRK---GDPRHSDHHPVIVT 655


>gi|255011809|ref|ZP_05283935.1| hypothetical protein Bfra3_21905 [Bacteroides fragilis 3_1_12]
 gi|313149648|ref|ZP_07811841.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313138415|gb|EFR55775.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 678

 Score = 56.7 bits (135), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/281 (12%), Positives = 67/281 (23%), Gaps = 31/281 (11%)

Query: 2   SVVTVATWNVN--SI---RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56
           ++V V  WN+    I         +   I+  + D++ +QE              SL YH
Sbjct: 409 NIVKVLQWNIWHGGIHLGNEGQQRVFDLIRSTHADVVMMQE----AYGIQQMLADSLGYH 464

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
           ++T      N                    +             +    LR         
Sbjct: 465 LKT-HSLKDNLAMYSRFPLEPIAWREPFKSNPAKITLPNGKRIMLVDCWLRYAYRPEYTS 523

Query: 117 NPITSTKYDDKISW--------IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168
                                   R +         E  +      +     H  +    
Sbjct: 524 GYAEKGLDPSVWVAEDSILALPDIRNIYTKDIVPNQETDMPVIITGDFNSCSHLDWTERA 583

Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG----IRID 224
                 +      + + +   GF D+ R  +     Y        + +   G     RID
Sbjct: 584 KPLHHGYGPVAFPASRYMLENGFKDSFREKNPDEVAY-----QGGTVAAIYGQMQMSRID 638

Query: 225 HIMLSPEATSLLHSARIDTKPRGWTK--PSDHTPVIVSLDI 263
            I         + S++I            SDH  V+   ++
Sbjct: 639 FIYYKGGL--KVLSSKIVRTAPEIDYVWASDHAAVLTVFEV 677


>gi|282164884|ref|YP_003357269.1| hypothetical protein MCP_2214 [Methanocella paludicola SANAE]
 gi|282157198|dbj|BAI62286.1| conserved hypothetical protein [Methanocella paludicola SANAE]
          Length = 263

 Score = 56.7 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 39/262 (14%), Positives = 79/262 (30%), Gaps = 23/262 (8%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETCGQKSYNGVAILSKY 74
           RIH+  + I+E +PDII  QE      +   E L  + +   I++     Y+      + 
Sbjct: 7   RIHDQVSAIRELSPDIIAFQEVTALTLSKYIEELSKIGFTHFIDSFQFVKYSSRLKGPRR 66

Query: 75  QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRF 134
               + +  P  +     +       ++            H   + +   +D I      
Sbjct: 67  YGELVASRWPIMEFPGFLKVPWQEKVLSCLIESPEGTIELHTAHVPNGSTNDWIKIRTLE 126

Query: 135 LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW--ENDACFTLEVRQSFQKLQNMGFT 192
             +     +     I  GD+N   +       I W     A     + + + K  + G  
Sbjct: 127 GIYKGLACQSHNHRILCGDFNTPQKELPDGKIITWGQYEKANGDYALCKYWGKRWDKGER 186

Query: 193 DAIRATHDTH-------------HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           + +                      +S++          +    DH+  S      +   
Sbjct: 187 NVLEGLAQFDLADVYRKLNGYVTRDFSWYTKRRGKRIGRR---FDHVFASSSL--KVKEC 241

Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261
           R   + R     SDH+P+ V+ 
Sbjct: 242 RYLHELR-RKGLSDHSPIEVTF 262


>gi|299141468|ref|ZP_07034604.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           oris C735]
 gi|298576804|gb|EFI48674.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           oris C735]
          Length = 299

 Score = 56.7 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 45/271 (16%), Positives = 81/271 (29%), Gaps = 33/271 (12%)

Query: 8   TWNV-----------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY- 55
           ++N+           NS + R  +L  +I    P I   QE   +  +   + L +  Y 
Sbjct: 42  SYNIRYNVSDDIAEGNSWKQRCPHLCDFINFEQPVIFGAQEVLADQLHDLLQGLDNYGYI 101

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
            +     K     A +   + +  +       L          +      +     +   
Sbjct: 102 GVGREDGKEAGEYAAIFYKKDLLKLLDSGYFWLSETPEKPSTGWDAACIRICTWGKFQDK 161

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
            +  T   ++  +  +    R  S RL ++      G  + I       N    +     
Sbjct: 162 ASKKTFYFFNTHMDHVGAVARRESARLIIQRMKELTGGKHTILTGDFNANQT--DESYKM 219

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATS 234
             E         N     A           ++ DY  D      G+ RIDHI ++ +   
Sbjct: 220 FSESGFLHDCYVNAHQRMAPAG--------TWNDYMQDC----PGMARIDHIFVTKDFD- 266

Query: 235 LLHSARIDTKPRGWTKP----SDHTPVIVSL 261
            ++   I T      K     SDH PV+V L
Sbjct: 267 -INHYGIFTNSYWLGKTRRNISDHYPVMVKL 296


>gi|255039474|ref|YP_003090095.1| Endonuclease/exonuclease/phosphatase [Dyadobacter fermentans DSM
           18053]
 gi|254952230|gb|ACT96930.1| Endonuclease/exonuclease/phosphatase [Dyadobacter fermentans DSM
           18053]
          Length = 233

 Score = 56.7 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/273 (11%), Positives = 85/273 (31%), Gaps = 56/273 (20%)

Query: 4   VTVATWNV-NSIR----ARIHNLAAWIKENNPDIICLQET-------KTEDK--NFPFET 49
           + + ++N+ + +     + + ++   IKEN+PD++ LQ         K + +      +T
Sbjct: 1   MKLMSFNIRHGLNNQEESNLRDILRIIKENDPDLVALQAVDSLVDKGKVQFQLRQIAAQT 60

Query: 50  LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
               +Y +         G+ ILS +   +              + ++      ++++   
Sbjct: 61  GMYYSYAVADTNDNGTQGLGILSNWPMEKTQVIHLPKTPGADPKVLQCGLIKLSRSVTFR 120

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
                        +Y   +    +        +   +P++   D    P     ++    
Sbjct: 121 FCNSRL-------EYASVMDRALQAAYINQMLVNSVQPVLLGMDMGARPNEQPYFSFRRN 173

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
             DA    +++   + L                                 G R+D+I   
Sbjct: 174 WQDAARGSQMQTWNEGLP--------------------------------GDRLDYIFAL 201

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
                 + + ++    R +   SDH P+  +++
Sbjct: 202 LNNKVRIKNYKV---IRNYPDVSDHYPIQATIE 231


>gi|116695510|ref|YP_841086.1| metal-dependent hydrolase [Ralstonia eutropha H16]
 gi|113530009|emb|CAJ96356.1| Metal-dependent hydrolase [Ralstonia eutropha H16]
          Length = 243

 Score = 56.7 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 39/273 (14%), Positives = 70/273 (25%), Gaps = 47/273 (17%)

Query: 4   VTVATWNVNSIRA-------RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56
           +TV ++N++  RA       R   +A  ++E + DI+ LQE                   
Sbjct: 1   MTVVSYNIH--RAVGTDRRYRPDRIATVLEELDADIVALQEV-----------------E 41

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT-FTINTQTLRIGNLYLPH 115
             +    +   +A  +    +   T + G+     A         +N   L +       
Sbjct: 42  SGSSNDHTLEYLAGHTGMHVVSGFTRVRGNADYGNALLARFAPQAVNQIDLTVKGCEPRG 101

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
              +T            R +         E         N +                  
Sbjct: 102 AIDVTLACTASGWESALRVIATHLGLRPGERRRQVQQLLNYVAAAPPLP-------TILL 154

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
                                    T    S W  +A          +D I +SP   + 
Sbjct: 155 GDVNEWFLWGRPLRWLHAYFEHAPHTATFPSRWPVFA----------LDRIWVSPR--AH 202

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268
           L S      P      SDH P++   ++P   +
Sbjct: 203 LVSVASHRSPLARV-ASDHLPLLARFEVPAAPQ 234


>gi|327189443|gb|EGE56605.1| putative metal-dependent hydrolase protein [Rhizobium etli
           CNPAF512]
          Length = 239

 Score = 56.7 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 38/269 (14%), Positives = 75/269 (27%), Gaps = 49/269 (18%)

Query: 4   VTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS------ 52
           + + T+NV+S      +     +A+ I E   DI+ LQE +          L +      
Sbjct: 6   IKLLTYNVHSCIGNDRKLDPGRIASVIAEAGADIVALQEVRRRTGGIDQAYLIASLLKMQ 65

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
            ++H      +   G AI++      +         + +          + + L +    
Sbjct: 66  AHFHPALSVAEEQYGDAIITALPTSAVKAGPLPSIGEQRGALSVEVLVGDRKLLVVNTHL 125

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
              G          +         +    +E   P +  GD+N IP             D
Sbjct: 126 GLRGRER------IRQMTTLLNSGWLRGAMEEPLPCVLCGDFNAIPSSATYRLVARSLKD 179

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
           A                       + +                     +R+DHI ++ + 
Sbjct: 180 AQLGGTAAP----------RATFPSRYPL-------------------MRLDHIFVTDDL 210

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
              +  A +    R     SDH P+   +
Sbjct: 211 V--VKRAAVLQN-RLTKVASDHLPLFAEI 236


>gi|321468777|gb|EFX79760.1| hypothetical protein DAPPUDRAFT_3216 [Daphnia pulex]
          Length = 288

 Score = 56.7 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 40/264 (15%), Positives = 67/264 (25%), Gaps = 23/264 (8%)

Query: 15  RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETCGQKSYNGVAILS 72
           R R + +   I E NPDIICLQE   +   F    L+S  Y              +   +
Sbjct: 31  RTRRYRIVEEIVEYNPDIICLQEV--DHYQFLSRALRSQGYEGIYFPKPDSPCIYIKGNN 88

Query: 73  KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIK 132
                 I       +L      I   + + +  + I  +     +           + +K
Sbjct: 89  GPDGCAIFYRANDYELIKVETRIVEVWRVQSNQVVILTMLRHKASGREICV---ATTHLK 145

Query: 133 RFLRFASQRLELEEPLIFAGDYN------IIPQPHDCYNPIIWENDACFTLEVRQSFQKL 186
                    L  E+                 P                 T+     F   
Sbjct: 146 ARQGALLSTLRNEQGKDILDFLQNNVDVADCPIIMAGDFNAEPTEPVYSTIRSDSRFGFD 205

Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE------ATSLLHSAR 240
                             Y+ W    +  S +    ID++  S                +
Sbjct: 206 SAYRCDVDGAEEAGQEPPYTTWKVRGEGESCHT---IDYVFFSRRQLGVNQVLPFPTGEQ 262

Query: 241 IDTK-PRGWTKPSDHTPVIVSLDI 263
           I       +  PSDH  ++V  D+
Sbjct: 263 IGPDRVPSFQYPSDHFSLVVDFDL 286


>gi|239627663|ref|ZP_04670694.1| exodeoxyribonuclease III [Clostridiales bacterium 1_7_47_FAA]
 gi|239517809|gb|EEQ57675.1| exodeoxyribonuclease III [Clostridiales bacterium 1_7_47FAA]
          Length = 311

 Score = 56.7 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 44/309 (14%), Positives = 77/309 (24%), Gaps = 54/309 (17%)

Query: 4   VTVATWNVNSIR-----ARIHNLAAWIKENNPDIICLQETKTEDKNF----PFETLQSLN 54
           + + T N +S+      A++H  A  +    PDII LQE              + L+   
Sbjct: 1   MKLMTLNTHSLEEENYEAKLHAFAEGVCRAEPDIIALQEV--NQTQIAAPVDKKDLELYG 58

Query: 55  Y-HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
           Y     C   + +          +        D+   +A  I A          IG    
Sbjct: 59  YVPCAPCTPYAPHAQCASVSQCSVHPSPIPRTDNHAYRAARICAEHGRPYHWTWIGAKTG 118

Query: 114 PHGNPITSTKYDDKISWIKRFLRFA--SQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
                              +             +   I              Y   +   
Sbjct: 119 YGKYDEGLAILSRIPIAETKQFYITASQDYANWKTRKILGIGIAAEHGMEYFYTVHMGWW 178

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATH--------------------DTHHLYSFWDYY 211
                    Q  +  + +G    +                        D    + + D Y
Sbjct: 179 KDEDEPFEGQWERIRRELGDGACLETYPGPVWLMGDFNSPAHVRGEGRDLIRGFGWLDSY 238

Query: 212 ADSWSKN------------------KGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253
             + SK+                   G+RID+I  S +    + S+R+          SD
Sbjct: 239 ELAGSKDSGITVGHAIDGWREQGDVSGMRIDYIWTSRKVP--VRSSRVIFNGSYEPIVSD 296

Query: 254 HTPVIVSLD 262
           H  +IV  +
Sbjct: 297 HYGIIVEYE 305


>gi|308808326|ref|XP_003081473.1| Apurinic/apyrimidinic endonuclease and related enzymes (ISS)
           [Ostreococcus tauri]
 gi|116059936|emb|CAL55995.1| Apurinic/apyrimidinic endonuclease and related enzymes (ISS)
           [Ostreococcus tauri]
          Length = 447

 Score = 56.7 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/186 (12%), Positives = 56/186 (30%), Gaps = 18/186 (9%)

Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165
           + +      +G      +      +  +         + ++ +I+ GD N   +  D   
Sbjct: 242 IVLNTYVPHNGGNPERWEKRAMWDFRVKRF---LTHYKGKKDVIWLGDLNCAHRDLDVAP 298

Query: 166 PIIWENDA--CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223
                         E ++    L      DA RA H     +++             +R+
Sbjct: 299 SPEQFIGVGGFTVPERQRFTDILSTSDMVDAYRALHGDRQTFTW---RGIGMGSGLAMRL 355

Query: 224 DHIMLSPEATSLLHSARI----DTKPRGWTKP------SDHTPVIVSLDIPEPRKKQQDS 273
           D+ ++       L S               +P      SDH  + ++L   +    ++ S
Sbjct: 356 DYFIVPRTFVHRLKSCETSTDRFDDAVARERPISCFFGSDHCALYLTLHKRDASDAEKPS 415

Query: 274 TSQNMK 279
            ++ +K
Sbjct: 416 ETKAVK 421


>gi|260462207|ref|ZP_05810451.1| Endonuclease/exonuclease/phosphatase [Mesorhizobium opportunistum
           WSM2075]
 gi|259032067|gb|EEW33334.1| Endonuclease/exonuclease/phosphatase [Mesorhizobium opportunistum
           WSM2075]
          Length = 371

 Score = 56.7 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 46/310 (14%), Positives = 83/310 (26%), Gaps = 77/310 (24%)

Query: 25  IKENNPDIICLQETKTEDKNFPFETLQSLNYHI--------------------------- 57
           I     D+IC+QE      N          Y                             
Sbjct: 66  IAATRADVICMQEV----DNIEALKAFEYGYLFKMVGQGYRQKYTTSGNDSRGIDVAIMM 121

Query: 58  --ETCGQKSYNGVAILSKYQPIEIVTHLPGDDL----------DVQARFIEATFTINTQT 105
             ET   +    V + S          L   +L            +   +E   T+    
Sbjct: 122 RNETAQGQPIEFVRMTSYAHVTYEQFGLYTPELAALGNQANERVFRRDCLEIDITVGGVP 181

Query: 106 LRIGNLYLPHGNPI----------TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYN 155
           L +  ++                    +  +  +  +   +        ++     GD N
Sbjct: 182 LTLYLVHFKSMGSPRNGLDGREATMPVRIAEAQAVRRIIEQRFGVDHAADKRWAICGDMN 241

Query: 156 IIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW 215
              Q                  E +     L   GF++ I       + ++F  Y+    
Sbjct: 242 DYRQRVKIAGDEFDGYRFEVVDEAQSCIDVLTAGGFSENIVERRPEMNRWTF--YHTRGP 299

Query: 216 SKNKGIRIDHIMLSPEATSLLHSA-------------------RIDTKPR-GWTKP--SD 253
            +    ++D+I+LS    +   +A                    ++  PR GW +P  SD
Sbjct: 300 EERHLCQLDYILLSKGLAAKNATAVPDIIRNGQPWRTIFPAGQEVERFPRAGWDRPKASD 359

Query: 254 HTPVIVSLDI 263
           H PV ++LDI
Sbjct: 360 HCPVAITLDI 369


>gi|258647674|ref|ZP_05735143.1| AP endonuclease domain protein [Prevotella tannerae ATCC 51259]
 gi|260852503|gb|EEX72372.1| AP endonuclease domain protein [Prevotella tannerae ATCC 51259]
          Length = 359

 Score = 56.7 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 37/247 (14%), Positives = 68/247 (27%), Gaps = 16/247 (6%)

Query: 19  HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIE 78
           +N+A +++    DI CLQE  + D  +       +  H +      +NGV I        
Sbjct: 122 NNVALYLELQKADIACLQEVPSFDGYYEQHVFPVMK-HAKYHDGILFNGVFIAMFSHYPI 180

Query: 79  IVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFA 138
           +   L   D    +             L I N     G      +   ++          
Sbjct: 181 VRHELICQDEGNGSVAFWTVRAPGDTILVINNHLKSIGLSRQDREEFKEMVHAPESKISR 240

Query: 139 SQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT 198
                +   +  A                         +          +  +    +  
Sbjct: 241 QGSKTILSKITHAAAARAAMADKVAAFIDRHRGT--PMIVCGDFNDTSISYAYRRVGKDL 298

Query: 199 HDTHHLYSFWDYYADSWSKNKG---IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHT 255
            D +             S N+    +RID +  S E T     A +D++     K SDH 
Sbjct: 299 TDAYVS----TGRGFGRSFNRDAIFVRIDQMFCSEEFTPYA--AYVDSRI----KCSDHY 348

Query: 256 PVIVSLD 262
           P++   +
Sbjct: 349 PIVAYFE 355


>gi|194035181|ref|XP_001925325.1| PREDICTED: sphingomyelin phosphodiesterase 2 [Sus scrofa]
 gi|311244316|ref|XP_003121404.1| PREDICTED: sphingomyelin phosphodiesterase 2-like [Sus scrofa]
          Length = 423

 Score = 56.7 bits (135), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 42/297 (14%), Positives = 86/297 (28%), Gaps = 37/297 (12%)

Query: 4   VTVATWNVNSI------RA-RIHNLAAWIKENNPDIICLQETKTEDK--NFPFETLQSLN 54
           + +   N   I      RA R+  L  ++   + D++ L+E  +E        + L +  
Sbjct: 9   LKIFNLNCWGIPFLSKHRADRVKRLGDFLNMESFDLVLLEEVWSEQDFQYLRQKLLPTYP 68

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN---- 110
                      +G+ + SK+   E   H+   +           F      L + +    
Sbjct: 69  AAHYFRSGIIGSGLCVFSKHPIQEFTQHVFTLNGYPYMVHHGDWFCGKAVGLLVLHLSGL 128

Query: 111 -------LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                        +         +++      +F     +  + ++  GD N+ P+   C
Sbjct: 129 VLNAYVTHLHAEYSRQKDIYLAHRVAQAWELAQFIHHTSKKADVVLLCGDLNLHPKDLGC 188

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223
                W       LE R      +           +                    GIRI
Sbjct: 189 RLLKEWTGLHDAFLETRDFKGSEEGCTMVPENCYVNQRELE-----------QFPVGIRI 237

Query: 224 DHIMLSPEATSLLHSARIDT-----KPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTS 275
           D+++     + L  S +         P   T  SDH  ++ +L +     +   S +
Sbjct: 238 DYVLY-KAVSGLYISCKTLKTTTGSDPHSGTPLSDHEALMATLCVRHSPPQHNPSPT 293


>gi|223984111|ref|ZP_03634263.1| hypothetical protein HOLDEFILI_01555 [Holdemania filiformis DSM
           12042]
 gi|223963905|gb|EEF68265.1| hypothetical protein HOLDEFILI_01555 [Holdemania filiformis DSM
           12042]
          Length = 276

 Score = 56.3 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 41/272 (15%), Positives = 80/272 (29%), Gaps = 22/272 (8%)

Query: 1   MSVVTVATWNV---------NSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFET 49
           M+ + V T+N+         N +R   R   +   I   +PDII +QE      +   + 
Sbjct: 8   MTCLKVMTFNLKNDMFFTRKN-LRWDTRRQYVRNLIASTSPDIIGVQEL---SDSMREQL 63

Query: 50  LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
              L  +      ++     +      + +       +        +     +     I 
Sbjct: 64  QALLPQYQFVGQARNRRRQFMHEHSDILFLKDRFELLEEKTFWLSKQPEEAGSRTWTSIF 123

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
                               +        +    +E   I      +     +   P+I 
Sbjct: 124 PRICTMAQLKDRETEQVFRVFNTHLDHLLAYTRTVEIRTII---REMQRLQQEKACPLIL 180

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
             D   T+        ++       ++  +D+   ++   Y      K   + ID+I +S
Sbjct: 181 MGDLNTTMSSPSLQLLIKPENR-LNLKPVYDSSAAFNTLHY-GKGRLKEDRLPIDYIYVS 238

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
            +    + S RI T       PSDH PVI  L
Sbjct: 239 EDYD--VRSTRIITTCFNGLYPSDHYPVICHL 268


>gi|254494845|ref|ZP_01051882.2| endonuclease/exonuclease/phosphatase family protein [Polaribacter
           sp. MED152]
 gi|213690427|gb|EAQ41310.2| endonuclease/exonuclease/phosphatase family protein [Polaribacter
           sp. MED152]
          Length = 333

 Score = 56.3 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 48/273 (17%), Positives = 86/273 (31%), Gaps = 44/273 (16%)

Query: 2   SVVTVATWNV---N--------SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETL 50
           S + + ++NV   N         I    + ++ ++    PDI+ LQE       F     
Sbjct: 94  SDLKIMSYNVRMFNHWQWIEEEGI---PNKISEFVSAKEPDILLLQE-------FHNSDN 143

Query: 51  QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
            S NY  +    K+ N    L+ Y   +I+     +  D     I A       T+RI N
Sbjct: 144 PSFNYPYKYIKLKNTNSNIGLAIYSNYKIINKGSLELTDTSNNIIFADVLKGKDTIRIYN 203

Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170
           L+L            +  ++ +        RL              +    +     I  
Sbjct: 204 LHLQSLELN-----AEAENFGQENSEKLLARLRAGFKKQAEQTEEFLLHEANWKGKKIVS 258

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230
            D          + ++ N      I A       Y++      ++     +RID I+   
Sbjct: 259 GD-FNNTAYSWVYNQISNNKKDAYIEAGKGFGKTYNY------AFP----LRIDFILTDE 307

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                  +A I+       K SDH P+   ++ 
Sbjct: 308 -------NAIINQFTSFNEKNSDHFPIQARINW 333


>gi|288554501|ref|YP_003426436.1| endonuclease/exonuclease/phosphatase [Bacillus pseudofirmus OF4]
 gi|288545661|gb|ADC49544.1| endonuclease/exonuclease/phosphatase [Bacillus pseudofirmus OF4]
          Length = 265

 Score = 56.3 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 40/269 (14%), Positives = 72/269 (26%), Gaps = 19/269 (7%)

Query: 4   VTVATWNVNSIRAR--------IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55
           + + T NV+   A         + +L   I E   D+I LQE          E     + 
Sbjct: 3   LKLLTLNVH---AWQEENQEKKLDHLVKTIFEEQYDVIALQEVSQHRDQDVVEGQIKADN 59

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL---RIGNLY 112
           +     +K     +   +             +  +               +   R    +
Sbjct: 60  YGYILQKKLKELGSAPYEMVWAPCHYGYEVFEEGIALLTRHPIIESTDFYVTKSREMKNW 119

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                     + D+K            +  E             IP     +    + N 
Sbjct: 120 KSRNIVGALIEIDNKPIHFYSCHLGWWEDTEEPARGQMDALLEQIPADGRVFLMGDFNNH 179

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
           A    E    +  L   GF D      +     +     A      +GIRID I+ + + 
Sbjct: 180 ADMRNEG---YDYLIQNGFYDTFTLADEKDSGVTVEGKIAGWDQNKRGIRIDLILTNQKV 236

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
              + S+++    R     SDH  V   +
Sbjct: 237 --NVFSSKVIFNGRNRDIVSDHFGVEAVI 263


>gi|254776497|ref|ZP_05218013.1| endonuclease/exonuclease/phosphatase [Mycobacterium avium subsp.
           avium ATCC 25291]
          Length = 254

 Score = 56.3 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/270 (11%), Positives = 76/270 (28%), Gaps = 31/270 (11%)

Query: 4   VTVATWNV-------NSIRARIHNLAAWIKENNPDIICLQET-----KTEDKNFPFETLQ 51
           + VAT+N+       + +   +  L   I+  +PD++ LQE      ++E  +      +
Sbjct: 1   MRVATFNILHGRTVGDGV--IVERLRDCIRRLDPDVLSLQEVDCDQPRSEHADLTGAAAE 58

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
           ++         +    ++       +                 +      + Q LR+  +
Sbjct: 59  AMG----AVEHRFVAAISGTPGATWMAATGDEQPGTAAYGIALLSRYPVASWQVLRLPRI 114

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
            +     +        +    R    A     + E  +     + +P  +      +  +
Sbjct: 115 PMRFPMYLPGPNRVMIVDEEPRAAVIAQLGTPIGELTVANTHLSFVPGWNRRQLRRLIRD 174

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
                     +                    +  +F        + N   ++DHI+    
Sbjct: 175 LRGLPGPRLLTGDLNMTPQTVRRWSGMRALGNAKTFP-------ADNPNRQLDHILTDDR 227

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
               L  A +          SDH P++V L
Sbjct: 228 ---RLRCAAVQADLM---PISDHRPLVVDL 251


>gi|67845844|dbj|BAE00011.1| p97Bcnt [Tragulus napu]
          Length = 341

 Score = 56.3 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/263 (12%), Positives = 62/263 (23%), Gaps = 27/263 (10%)

Query: 6   VATWNVNSIRARIHNLAAWIKEN----NPDIICLQETKTE-DKNFPFETLQSLNYHIETC 60
           + TWNV S+          +K+     N DI+ + E K         +       H    
Sbjct: 89  IGTWNVRSMN---PGKLDVVKQEMDRINIDILGISELKWTGMGELNSDD------HYIYY 139

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
             +       ++      +   + G +L                   I            
Sbjct: 140 CGQQSLRRNGVALIVNKRVQNAIIGCNLKNDRMISLRFQGKPFNLTVIQVFAPTPYAEEG 199

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
                 +       +      L +            IP     +   +        ++  
Sbjct: 200 EVYRFYEDLQHLLEITPKIDVLFIIGDWNAKVGSQEIPGITGRFGLGMQNEAGRRLIDFC 259

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
                  N            +  LY++         +     ID+I+      S + SA+
Sbjct: 260 H-----HNRLVIANTLFQQPSRRLYTWTSPDGRFRDQ-----IDYIICRQRWRSSVQSAK 309

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263
                 G    SDH  +I    +
Sbjct: 310 TRP---GADCGSDHKLLIAKFRL 329


>gi|21241443|ref|NP_641025.1| hypothetical protein XAC0672 [Xanthomonas axonopodis pv. citri str.
           306]
 gi|21106782|gb|AAM35561.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
           str. 306]
          Length = 287

 Score = 56.3 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 37/274 (13%), Positives = 71/274 (25%), Gaps = 34/274 (12%)

Query: 4   VTVATWNVNSIRA------------RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51
           + V ++NV   R             R   + A IK+ +PD+   QE  +E   F  E L 
Sbjct: 34  LRVMSFNV---RVPADTDGDKRWQVRRAAMVALIKQTHPDVFGTQELVSEQAAFLAEQLP 90

Query: 52  SLNYHIETCGQKSYNGVA-ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
              +  +       +    +    + +E+V        D   R    T+      +    
Sbjct: 91  DYRWFGQGRRGDDSDEHMGVFYDARVLEVVESGDFWLSDTPERAGSITWGNVLPRMATWA 150

Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170
           L+    +      ++    +         +        +       +P          + 
Sbjct: 151 LFERRSDKRRFYLFNTHFPYRDEDEPARERSAR-----LILSRIAQLPATIPVVLTGDFN 205

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230
           +D         +                 +T   ++               RID I+   
Sbjct: 206 SDPDKITYPTLTAVLRDARAQASKRSGPENTFQDFTTHPTR----------RIDWILY-R 254

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
                           G   PSDH PV+   + P
Sbjct: 255 GLRPS--RFATLDDRPGGILPSDHYPVMAEFEWP 286


>gi|281352756|gb|EFB28340.1| hypothetical protein PANDA_003873 [Ailuropoda melanoleuca]
          Length = 353

 Score = 56.3 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 47/285 (16%), Positives = 80/285 (28%), Gaps = 59/285 (20%)

Query: 2   SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           SV +  TWNV+ +       RAR   + +++   NPD+I LQE        P        
Sbjct: 103 SVFSFITWNVDGLDLNNLQERAR--GVCSYLTLYNPDVIFLQEV------IPP------- 147

Query: 55  YHIETCGQKSYNGVAI-LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
           Y      + S   +     +     I+          Q         +    L +     
Sbjct: 148 YCSYLKKRASSYEIITGHEEGYFTAIMLKKSRVKFKSQEIIPFPNTKMMRNLLCVYASVS 207

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
            +   + ++  +      K  +      L+               Q       +I+  D 
Sbjct: 208 GNELCLMTSHLESTRGHAKERMNQFKTVLK-------------KMQEAPESATVIFAGDT 254

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG------IRIDHIM 227
                       L +             H  Y+ WD   +    N G      +R D I 
Sbjct: 255 NLRDHEVTKCGGLPSNILDVWEFLGKPKHCQYT-WDTQMNC---NLGIAPACKLRFDRIF 310

Query: 228 LSPEATSLLHSARIDT---KPRGWTK------PSDHTPVIVSLDI 263
                 +   S  I     +  G  K      PSDH  ++ +LD+
Sbjct: 311 ----FRTAAESGHIVPQSLELLGLEKLDCGRFPSDHWGLLCNLDV 351


>gi|241113465|ref|YP_002973300.1| Endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240861673|gb|ACS59339.1| Endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 242

 Score = 56.3 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 38/272 (13%), Positives = 74/272 (27%), Gaps = 52/272 (19%)

Query: 4   VTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQETKT---------EDKNFPFET 49
           + + T+NV+S      +     +A+ I E   DI+ LQE            +        
Sbjct: 6   IKILTYNVHSCIGGDRKLDPGRIASVIAEAEADIVALQEVDVLRRRTGGVDQAHAIASLL 65

Query: 50  LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
               ++H      +   G AI++      +         + +          N + L + 
Sbjct: 66  KMQAHFHPALSIAEEQYGDAIITSLPTGAVKAGPLPSIGEQRGAISVEILVGNRKLLVVN 125

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
                 G          +         +     +   P I  GD+N IP           
Sbjct: 126 THLGLRGRER------IRQMTTLLNPGWLRGTTDEPLPTILCGDFNAIPSSATYRLAARS 179

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
             DA                       + +                     +R+DHI ++
Sbjct: 180 LKDAQLAGSAAP----------RATFPSRYPL-------------------MRLDHIFVT 210

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
            +    +  A +  + R     SDH P++  +
Sbjct: 211 DDLI--VKQAAVL-ENRLTRIASDHLPLLAEI 239


>gi|300692524|ref|YP_003753519.1| metal dependent endonuclease/phosphatase [Ralstonia solanacearum
           PSI07]
 gi|299079584|emb|CBJ52262.1| putative metal dependent endonuclease/phosphatase [Ralstonia
           solanacearum PSI07]
          Length = 248

 Score = 56.3 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 37/276 (13%), Positives = 83/276 (30%), Gaps = 46/276 (16%)

Query: 1   MSVVTVATWNVN----SI--RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           M  + VAT+N++     I  R R+H++   +   + DI+ LQE +  +       L   N
Sbjct: 1   MLRLRVATYNIHKGVTGIARRVRVHDVRQGLHTMDADIVFLQEVQDRNDRLVAAELFDPN 60

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           Y        +         Y       +   D        +     + ++ L I +    
Sbjct: 61  Y--------TQLRYLATDVYPHTVYGRNAVYDHGHHGNAIMSRYPILLSENLDISDHRFE 112

Query: 115 HGNPITSTKY--DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD---CYNPIIW 169
               + +       ++  +       ++  + +   +     +++P         +   W
Sbjct: 113 QRGLLHAVADLGFGEVHLLCAHFGLFARSRQRQAEALIERVRSVVPTDAPLLVAGDFNDW 172

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
            N     +       ++ +         T  +H  +               +R+D I + 
Sbjct: 173 NNRLDRVICQALGATEVADRSAGARPLRTFPSHLPW---------------LRLDRIYV- 216

Query: 230 PEATSLLHSARIDTKP----RGWTKPSDHTPVIVSL 261
                      I+       R W + SDH P++  L
Sbjct: 217 -------RGFDIERAHALTGRDWAQRSDHVPLLADL 245


>gi|300774456|ref|ZP_07084319.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910]
 gi|300506271|gb|EFK37406.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910]
          Length = 340

 Score = 56.3 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 48/264 (18%), Positives = 88/264 (33%), Gaps = 46/264 (17%)

Query: 4   VTVATWNVN----SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HI 57
           + V T+NV             +  +IK  + DII +QE K  ++    + ++  +     
Sbjct: 114 IKVLTFNVKYGEYGW----DKVKDYIKAQDADIILVQE-KDTNRVIKRDLIKYPSVILKT 168

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
           +    +    +   ++         + G  + +   ++E      +   ++  L L + +
Sbjct: 169 KHKIVRQAELIDEKARGNSFYADIDINGKVVRIINVYLEPFRLNKSMFTKLDALGLGNVS 228

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
            + S       +   +  R          P+I AGD+N +P  ++ YN      DA    
Sbjct: 229 TLLSHMTPTFQAHEDQVKRIRKMVDLSPYPVILAGDFNSVPNSYEYYNLGKDLQDAFLVA 288

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
               +                       SF DY          +RID+I  S     L  
Sbjct: 289 GKGSAS----------------------SFHDYKVP-------LRIDYIFSSKSIIPL-- 317

Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261
           S ++D       K SDH PVI   
Sbjct: 318 SYKVDQSV----KLSDHYPVIAEF 337


>gi|147791244|emb|CAN67888.1| hypothetical protein VITISV_013606 [Vitis vinifera]
          Length = 517

 Score = 56.3 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 17/137 (12%), Positives = 38/137 (27%), Gaps = 4/137 (2%)

Query: 4   VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTED--KNFPFETLQSLNYHIET 59
           + + +WNV      ++   +  +I+    D+IC+QETK +    N             + 
Sbjct: 358 MKILSWNVRGANDSSKRKVIKTFIRNQRVDVICIQETKIQAMSDNIARSIGSGRFLEWKA 417

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
              +  +G  ++   +    V         +  RF             +  L+       
Sbjct: 418 VNAEGASGGILMCWDKRTLEVLDWEEGQFTLSCRFRNVENGAIWIFTGVYXLFSKMEREA 477

Query: 120 TSTKYDDKISWIKRFLR 136
              +             
Sbjct: 478 LWDELGAIRGLWDDPWC 494


>gi|296217531|ref|XP_002755080.1| PREDICTED: 5'-tyrosyl-DNA phosphodiesterase-like [Callithrix
           jacchus]
          Length = 362

 Score = 56.3 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 45/285 (15%), Positives = 82/285 (28%), Gaps = 59/285 (20%)

Query: 2   SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           S+ ++ TWNV+ +       RAR   + +++   +PD++ LQE        P        
Sbjct: 112 SMFSLMTWNVDGLDLNNLAERAR--GVCSYLVLYSPDVVFLQEV------IPP------- 156

Query: 55  YHIETCGQKSYNGVAI-LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
           Y      +     +     +     I+       L  Q      +  +    L +     
Sbjct: 157 YCSYLKKRAKNYEIITGHEEGYFTAIMLKKSRVKLKSQEIIPFPSTNMMRNLLCVHVNVS 216

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
            +   + ++  +      K  +      L+               Q       +I+  D 
Sbjct: 217 GNELCLMTSHLESTKGHAKERMNQLKIVLK-------------KMQEAPESATVIFAGDT 263

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG------IRIDHIM 227
               +       L +             H  Y+ WD   +S   N G      +R D I 
Sbjct: 264 NLRDQEITKCGGLPSNIVDVWELLGKPKHCQYT-WDTQMNS---NLGITAACKLRFDRIF 319

Query: 228 LSPEATSLLHSARIDT---KPRGWTK------PSDHTPVIVSLDI 263
                 +      I        G  K      PSDH  ++ +LDI
Sbjct: 320 ----FRAAAEEGHIIPRSLDLLGLEKLDCGRFPSDHWGLLCNLDI 360


>gi|329847963|ref|ZP_08262991.1| endonuclease/Exonuclease/phosphatase family protein [Asticcacaulis
           biprosthecum C19]
 gi|328843026|gb|EGF92595.1| endonuclease/Exonuclease/phosphatase family protein [Asticcacaulis
           biprosthecum C19]
          Length = 278

 Score = 56.3 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/278 (12%), Positives = 66/278 (23%), Gaps = 40/278 (14%)

Query: 3   VVTVATWNVNSIR-----------ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51
            + V ++N   IR            R   LA  +   +PDI+ +QE   +     +   Q
Sbjct: 25  TLRVMSYN---IRYANDADRPNWGERREALAKQVAFTDPDILGVQE--AQPVQVAYLAAQ 79

Query: 52  SLNYHIE----TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107
              Y         G           + +   +                           R
Sbjct: 80  WPGYDHYGLGRDDGVNGETTTLFWRRDRFETVSKSHQWCSPTPDRPGKGWDAAWPRTITR 139

Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPL-IFAGDYNIIPQPHDCYNP 166
           +       G  +                  A Q   +             +    D    
Sbjct: 140 LVLRDRLSGKVLDVRNTHLDNEGAVARENCAKQVAGIVVESGALVIVLGDMNSGPDSAPY 199

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226
            +   DA    + R++                      ++ +D  A      +G  IDHI
Sbjct: 200 RVLTGDALGLKDARKA------------ATVDFGPPGTFNGFDLSAT-----QGEAIDHI 242

Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
            +       +    + T        SDH PV+  + + 
Sbjct: 243 FVPRGLA--VTRYGVLTDSFSGKVISDHFPVVADIRVD 278


>gi|260889173|ref|ZP_05900436.1| endonuclease/exonuclease/phosphatase family protein [Leptotrichia
           hofstadii F0254]
 gi|260861233|gb|EEX75733.1| endonuclease/exonuclease/phosphatase family protein [Leptotrichia
           hofstadii F0254]
          Length = 263

 Score = 56.3 bits (134), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 44/273 (16%), Positives = 81/273 (29%), Gaps = 23/273 (8%)

Query: 4   VTVATWNVNSIRARIHN--------LAAWIKENNPDIICLQET-KTEDKNFPFETLQSLN 54
           + + T NV+   A +          LA  I E   D+I +QE  +  +    F+ ++  N
Sbjct: 1   MKLLTINVH---AWLEENQMEKIDILAKDIAEKQYDVIAMQEVNQLMNNPIIFDDIRQEN 57

Query: 55  Y-HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
           Y  +     + Y        +    I      + + +  R           T    ++  
Sbjct: 58  YGWVLLEKLQEYTDTDYYYHWSNSHIGFSKYNEGVAIITRHKIKDEDEFYCTFA-QSVRT 116

Query: 114 PHGNPITSTKYDD--KISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
                I S   D   +                 +         N     +       +  
Sbjct: 117 ISARRIVSITIDYKGQDIEFYSCHMNLPNCETEDMGENLRNILNRSKTDNLKILMGDFNT 176

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG-IRIDHIMLSP 230
           DA    E    +Q + N G  D            +  D     W ++K   RID+I  + 
Sbjct: 177 DANGNPED---YQNILNQGLFDTYTLAEKKDSGVT-VDKGIHGWDQDKSQKRIDYIFCNK 232

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           E    +  +++    +     SDH  V V ++I
Sbjct: 233 EI--KVKESKVIFDGKNKGVVSDHFGVEVEIEI 263


>gi|242051080|ref|XP_002463284.1| hypothetical protein SORBIDRAFT_02g041190 [Sorghum bicolor]
 gi|241926661|gb|EER99805.1| hypothetical protein SORBIDRAFT_02g041190 [Sorghum bicolor]
          Length = 451

 Score = 56.3 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 45/271 (16%), Positives = 89/271 (32%), Gaps = 17/271 (6%)

Query: 15  RARIHNLAAWIKENNPDIICLQETKTEDK---NFPFETLQSLNY-HIETCGQKSYNGVAI 70
           R R  ++   ++E   DII LQ  + E++       E  + L   ++         G A+
Sbjct: 178 RPRRWSVEEVLREAGADIIGLQNVRAEEERGMRPLSELAEGLGMRYVFAESWAPEYGNAV 237

Query: 71  LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISW 130
           LS++       H   D  D +          +   +     +L H +     K  D I  
Sbjct: 238 LSRWPIKRWKAHRVADQSDFRNVLRATIEVPDAGEVNFHCTHLDHLDERWRMKQVDAIIR 297

Query: 131 IKRFLRFASQRLEL-EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNM 189
                   +  L   +     A  +  I + ++       + +    L+ +Q        
Sbjct: 298 SGDGPHILAGGLNALDGTDYSADRWADIVKYYEEIGKPTPKVEVMQYLKAKQYVDAKDFA 357

Query: 190 GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT 249
           G  +A+       ++               G R+D+I+ SP ++                
Sbjct: 358 GECEAVVVVAKGQNV------QGTCK---YGTRVDYILASPNSSYKFVPGS--YTVVSSK 406

Query: 250 KPSDHTPVIVSLDIPEPRK-KQQDSTSQNMK 279
             SDH  V V + IP+ R+   + +T+   +
Sbjct: 407 GTSDHHIVRVDVAIPQIRETDAETATNGKRR 437


>gi|291302648|ref|YP_003513926.1| endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis
           DSM 44728]
 gi|290571868|gb|ADD44833.1| Endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis
           DSM 44728]
          Length = 278

 Score = 56.3 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 44/287 (15%), Positives = 85/287 (29%), Gaps = 62/287 (21%)

Query: 2   SVVTVATWNVN-SIRARIHNLAAW------IKENNPDIICLQET------KTEDKNFPFE 48
           + + VAT+N++    A   N+         I   +  +I LQE       +++ ++   E
Sbjct: 28  TTLRVATYNIHAG--AGSDNVFDVDRTAEAIASLDASVISLQEVDVHWHSRSQWRDLATE 85

Query: 49  TLQSLNYHIETCG------------QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIE 96
              +L+ HI                ++ +    + S          +      V     E
Sbjct: 86  LATTLDMHIFFGPIYSLDPTTPGAPRREFGNAILSSYPIVDAKNHEITRLSTQVPNPVPE 145

Query: 97  ATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI 156
                    + +    +   +     + D  +   +        R +  EP +  GD+N 
Sbjct: 146 PMPGFPEVEIDVNGTPVHVYSTHLDYRPDPAVRQAQVADMRRIMRCDHGEPQLLLGDFNA 205

Query: 157 IPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS 216
            P+  +                             +D    +      Y+   Y A +  
Sbjct: 206 PPEAPELRPLWR---------------------KLSDVWAKSGQPDPGYT---YPASAPD 241

Query: 217 KNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +    RID+I  S      + SA         T  SDH PV+  L +
Sbjct: 242 R----RIDYIAASKRF--KVKSA-----ATPTTLASDHLPVVAELTL 277


>gi|284992404|ref|YP_003410958.1| endonuclease/exonuclease/phosphatase [Geodermatophilus obscurus DSM
           43160]
 gi|284065649|gb|ADB76587.1| Endonuclease/exonuclease/phosphatase [Geodermatophilus obscurus DSM
           43160]
          Length = 271

 Score = 56.3 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 35/270 (12%), Positives = 80/270 (29%), Gaps = 32/270 (11%)

Query: 4   VTVATWNVN-SI----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           V + T+N +  +    R  +  LA  +   + D+ICLQE    D++F             
Sbjct: 20  VRLVTFNTHHGVGDDGRHDLPRLATVLAAADADLICLQEV---DRHF------------- 63

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT--INTQTLRIGNLYLPHG 116
               +  +   +LS+   +++      D+               ++   + I +++   G
Sbjct: 64  GGRSEDVDQALLLSRALDMQLAWGPAIDEPRRDEGLRRQYGNALLSRLPVLISDVHPLPG 123

Query: 117 NPITSTKYDDKISWIKRF-LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
           +    +     +           +                I     +     +   D   
Sbjct: 124 SGEPRSALRTMVELDGAALWVTTTHLSTCSPEERAEQIAAIAQLHTEPMETGVLVGDFNA 183

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADS--WSKNKGIRIDHIMLSPEAT 233
                +  +          +    +    + FW         ++    RID + +SP   
Sbjct: 184 DPRAPELARLTGRFTDAWELAPDREDRAGWRFWQARRGGTHPARRPHRRIDQVWVSPGVG 243

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             +  A +          SDH P++V L++
Sbjct: 244 --VSRAHVLDGA----GASDHLPLVVDLEV 267


>gi|261878952|ref|ZP_06005379.1| AP endonuclease domain protein [Prevotella bergensis DSM 17361]
 gi|270334463|gb|EFA45249.1| AP endonuclease domain protein [Prevotella bergensis DSM 17361]
          Length = 364

 Score = 56.3 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 40/266 (15%), Positives = 78/266 (29%), Gaps = 22/266 (8%)

Query: 4   VTVATWNVNSIRARIHN------LAAWIKENNPDIICLQETKTEDKNFPFETLQ-SLNYH 56
           + V ++NV               +  +IK+ + DI+CLQE  +++     E L  +L   
Sbjct: 101 IKVLSYNVWLFAGWEDGKNDPNPILEYIKKQDADIVCLQE--SDNNEVGKEKLDSALGPI 158

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
            + C          +S Y    I++    +              I+ + + + N +L   
Sbjct: 159 YQYCDTAKRGKGNTISIYSKYPILSKEHIEYESRGNLSAAFKLMIDGEEVLVVNNHLETT 218

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
                 K + K           ++               I           I  +     
Sbjct: 219 GLTVEEKSEFKTMIKGEMKAGKAESTSRHLVSKLGKASAIRAAQAQAVARYIAYHCDMPI 278

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYS---FWDYYADSWSKNKGIRIDHIMLSPEAT 233
           +          +           D +   +      Y+ + +     +RID+IM S    
Sbjct: 279 ILCGDFNDSPISYAHRTIAEGLTDCYVETANGPGISYHHNGFY----VRIDNIMCSAHFK 334

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIV 259
                 R+D +     K SDH P+  
Sbjct: 335 PFA--CRVDNEI----KNSDHYPIYC 354


>gi|328542833|ref|YP_004302942.1| Endonuclease/exonuclease/phosphatase family [Polymorphum gilvum
           SL003B-26A1]
 gi|326412579|gb|ADZ69642.1| Endonuclease/exonuclease/phosphatase family [Polymorphum gilvum
           SL003B-26A1]
          Length = 362

 Score = 56.3 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 38/265 (14%), Positives = 71/265 (26%), Gaps = 29/265 (10%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V + N  ++     +L  ++K    D++ LQE              +  + +    ++
Sbjct: 123 LRVVSINTATLYLGTPDLLDYLKTVAADVVVLQE-------------ATWRWQLRRWEKR 169

Query: 64  SYNGVAILSKYQPIEIVTHLPG----DDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             N                  G                   +      + +         
Sbjct: 170 EGNRRIAGHGPYFEHFAVGPEGDVVVFSRYPIISRRGIDPAVPGVLREVAHREFLDIELD 229

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
            + +    ++      R A      +       +    P       P I   D   +   
Sbjct: 230 VAGRPVRIVAIHPASPRGARLWEARQAYYRHLSEALRGPAAGTD-LPTILIGDWNLSPWS 288

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
                 L+  G   A   T      Y F DY    W    G  +DH+ +SP         
Sbjct: 289 AHFRALLKAGGLKAAFPDTIPQTTRY-FADYRLR-WL--LGAPVDHVAVSPGL------- 337

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIP 264
            +D    G    SDH P++V + +P
Sbjct: 338 GVDRVGIGPDIGSDHLPLLVDIALP 362


>gi|296197295|ref|XP_002746222.1| PREDICTED: 5'-tyrosyl-DNA phosphodiesterase-like [Callithrix
           jacchus]
          Length = 392

 Score = 56.3 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 45/285 (15%), Positives = 82/285 (28%), Gaps = 59/285 (20%)

Query: 2   SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           S+ ++ TWNV+ +       RAR   + +++   +PD++ LQE        P        
Sbjct: 142 SMFSLMTWNVDGLDLNNLAERAR--GVCSYLVLYSPDVVFLQEV------IPP------- 186

Query: 55  YHIETCGQKSYNGVAI-LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
           Y      +     +     +     I+       L  Q      +  +    L +     
Sbjct: 187 YCSYLKKRAKNYEIITGHEEGYFTAIMLKKSRVKLKSQEIIPFPSTNMMRNLLCVHVNVS 246

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
            +   + ++  +      K  +      L+               Q       +I+  D 
Sbjct: 247 GNELCLMTSHLESTKGHAKERMNQLKIVLK-------------KMQEAPESATVIFAGDT 293

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG------IRIDHIM 227
               +       L +             H  Y+ WD   +S   N G      +R D I 
Sbjct: 294 NLRDQEVTKCGGLPSNIVDVWELLGKPKHCQYT-WDTQMNS---NLGITAACKLRFDRIF 349

Query: 228 LSPEATSLLHSARIDT---KPRGWTK------PSDHTPVIVSLDI 263
                 +      I        G  K      PSDH  ++ +LDI
Sbjct: 350 ----FRAAAEEGHIIPRSLDLLGLEKLDCGRFPSDHWGLLCNLDI 390


>gi|319795420|ref|YP_004157060.1| endonuclease/exonuclease/phosphatase [Variovorax paradoxus EPS]
 gi|315597883|gb|ADU38949.1| Endonuclease/exonuclease/phosphatase [Variovorax paradoxus EPS]
          Length = 274

 Score = 56.3 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 43/286 (15%), Positives = 79/286 (27%), Gaps = 68/286 (23%)

Query: 4   VTVATWNVN----SI----RARIHNLAAWIKENNPDIICLQETK----------TEDKNF 45
           + VAT+N++     I    R  IHNL   I++ + DI+CLQE +                
Sbjct: 31  LRVATYNIHKGVQGIGPARRLEIHNLGHAIEQLDADIVCLQEVRKMNRQAAARFARWPEL 90

Query: 46  P-FETLQSLNYHIETCGQ----KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT 100
           P  + L    Y              +G A+L+++  I        D    Q   +     
Sbjct: 91  PQADFLAPEGYTAVYETNAVTRHGEHGNALLTRWPVIRTGHQDISDHRFEQRGLLHVVIE 150

Query: 101 INTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP 160
           +  Q +    ++L         +      +I R +      +   +   +          
Sbjct: 151 VEGQPVHAIVVHLGLIKGSRVRQIARLREFIDREVPAHEAVVVAGDFNDWGARMRYAMNA 210

Query: 161 HDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG 220
               +                          T    +                       
Sbjct: 211 MGLRDASDLRG------------------PRTLTYPSRLPVAQ----------------- 235

Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRG--WTKPSDHTPVIVSLDIP 264
             +D +    +   L  S  +   PRG  W + SDH P++    +P
Sbjct: 236 --LDFVYG-RKLEPL--SCTV---PRGPIWARMSDHLPLVADFSLP 273


>gi|294011035|ref|YP_003544495.1| putative metal-dependent hydrolase [Sphingobium japonicum UT26S]
 gi|292674365|dbj|BAI95883.1| putative metal-dependent hydrolase [Sphingobium japonicum UT26S]
          Length = 248

 Score = 56.3 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 36/269 (13%), Positives = 62/269 (23%), Gaps = 48/269 (17%)

Query: 1   MSVVTVATWNVNSIRARI--------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52
           M  V VA++N   IR  I          +   + E + DII LQE             + 
Sbjct: 17  MKTVRVASYN---IRKAIGTDRRRVPERVIDVLNELDADIIALQE-----------ADRR 62

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
                          +   S Y+P+ +  H+        A  +     +    +      
Sbjct: 63  FGVRSAALPPWLLESI---SPYRPVPLNVHVDSMGWHGNAILVRKEAEVGAHDVLHLPCL 119

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
            P G  +           +       S     ++        +            + E  
Sbjct: 120 EPRGATMAEVTLGKASLRVFGMHLDLSGLWRRKQAAAVIHAASSRDAMPTVLMGDLNEWS 179

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
           A     +    +         +  A                        R+D IM     
Sbjct: 180 AERG-CLADFARHYSFAPCGRSFHARRPVA-------------------RLDRIMHCGRL 219

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
              L    +        K SDH P+    
Sbjct: 220 --KLVDCGVHESA-AARKASDHLPIWAEF 245


>gi|269121001|ref|YP_003309178.1| endonuclease/exonuclease/phosphatase [Sebaldella termitidis ATCC
           33386]
 gi|268614879|gb|ACZ09247.1| Endonuclease/exonuclease/phosphatase [Sebaldella termitidis ATCC
           33386]
          Length = 243

 Score = 56.3 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 40/268 (14%), Positives = 71/268 (26%), Gaps = 53/268 (19%)

Query: 4   VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQET-----KTEDKNFPFETLQSLNYH 56
           + + T+N+   R   +   +   IK+ +PD I LQE      ++   +   +  Q LNY 
Sbjct: 20  LKIMTYNIYGGRLA-NGTTIGRNIKKFDPDFISLQEVDYYTKRSNFNDIVKDIAQELNYS 78

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                +                    +                 +    +          
Sbjct: 79  YYYFKKSRDYDSGEFGIGFVS--RYPIEKIFEYELPSIGAEKRQVIAAQIDEKIFSKKVL 136

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
              T   Y+  I   +             +     GD+N++P        I   ND    
Sbjct: 137 IIDTHLDYNPNIKPKEMEALLNITAEFPGDVKFLTGDFNLLPTTEYYQQIIKEWNDTYLF 196

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
            E                                           RID+I         L
Sbjct: 197 DEP------------------------------------------RIDYIFGDKTNNWNL 214

Query: 237 HSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
            S++ I  +   W+  SDH P ++++DI
Sbjct: 215 RSSKFIKDEYLDWSTLSDHFPYMINVDI 242


>gi|149370646|ref|ZP_01890335.1| endonuclease/exonuclease/phosphatase family protein [unidentified
           eubacterium SCB49]
 gi|149356197|gb|EDM44754.1| endonuclease/exonuclease/phosphatase family protein [unidentified
           eubacterium SCB49]
          Length = 350

 Score = 56.3 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 47/271 (17%), Positives = 71/271 (26%), Gaps = 36/271 (13%)

Query: 3   VVTVATWNV---NS-----IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
            + V ++NV   NS       A        +K   PDI+ LQE    D + P   +    
Sbjct: 101 TLKVLSYNVHLFNSYHFKDFDASEKKFNEIVKAYQPDILSLQEY--SDADDPK--IVGYP 156

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           Y       K+      L  Y    I +  P     +     +    IN            
Sbjct: 157 YKYVHFKTKAVRNGVNLKYYLGHAIYSKYPI----INKGAFDFENAINNTLFVDIVKDKD 212

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
                        IS     L+   ++  L        D  I       +          
Sbjct: 213 TVRVYNLHLKSFGISPSISKLQEGDKKKLLGRMSQSFKDQAIQVSAILDHKNKSNYPSII 272

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDT----HHLYSFWDYYADSWSKNKGIRIDHIMLSP 230
                  +F  + N    D   A  +        YSF     D +      RID I+   
Sbjct: 273 TGDFNNTAFSYVYNELTEDMNDAYIEQGSGLGTTYSF-----DGFP----FRIDFILAEK 323

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
                     I +        SDH P++ +L
Sbjct: 324 YF-------DILSFTTIKETFSDHHPILSTL 347


>gi|147803328|emb|CAN68838.1| hypothetical protein VITISV_030956 [Vitis vinifera]
          Length = 1881

 Score = 56.3 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 8/38 (21%), Positives = 20/38 (52%), Gaps = 2/38 (5%)

Query: 4   VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETK 39
           + + +WN   + ++     +  +++   PD++  QETK
Sbjct: 830 MKIISWNTRGLGSKKKRRVVKDFLRSEKPDVVMFQETK 867


>gi|281421496|ref|ZP_06252495.1| AP endonuclease domain protein [Prevotella copri DSM 18205]
 gi|281404568|gb|EFB35248.1| AP endonuclease domain protein [Prevotella copri DSM 18205]
          Length = 365

 Score = 56.3 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 36/251 (14%), Positives = 72/251 (28%), Gaps = 13/251 (5%)

Query: 22  AAWIKENNPDIICLQE---TKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIE 78
            A+++E + DI+CLQE   T    +           Y   T      N + +LSKY  + 
Sbjct: 125 IAYLQEQDADIVCLQEACPTSRNIEQIDSMLKPMYAYQDTTMHVNGGNCLMLLSKYPILS 184

Query: 79  IVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFA 138
                     ++   +           +                  +  I  ++      
Sbjct: 185 KERIPYESKGNMSVAYRLKVKDREVLLINNHLETTGLSLEDRRQFKNLVIGKLQVDTAEE 244

Query: 139 SQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT 198
           + +L + +            +    Y     E       +         +      +   
Sbjct: 245 TSKLLVVKLAEATKKRAPEAEAVAKYIQQHKEQSIILCGDFNDGPISYAHRTIAKDLTDC 304

Query: 199 HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVI 258
           +          Y+   +     +RID+IM S +        ++D K       SDH P+I
Sbjct: 305 YIASGNGPGISYHHGGFF----VRIDNIMCSDDWEPY--ECKVDDKI----AVSDHYPII 354

Query: 259 VSLDIPEPRKK 269
             L +   ++K
Sbjct: 355 CKLKMRPKKQK 365


>gi|323344686|ref|ZP_08084910.1| hypothetical protein HMPREF0663_11446 [Prevotella oralis ATCC
           33269]
 gi|323093956|gb|EFZ36533.1| hypothetical protein HMPREF0663_11446 [Prevotella oralis ATCC
           33269]
          Length = 270

 Score = 56.3 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 37/263 (14%), Positives = 85/263 (32%), Gaps = 31/263 (11%)

Query: 4   VTVATWNVNSIRARIHNL-----AAWIKENNPDIICLQET--KTEDKNFPFETLQSLNYH 56
           + + T+N   IR+   +      A  +    PD++CL E   ++  + F  +        
Sbjct: 25  LKIITFN---IRSFEPDFNTQPYAELLWNEKPDVVCLNEVENRSSRQQFDGK-------- 73

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                Q   N + +   +     +++  G + +   ++ E     N    R   L     
Sbjct: 74  YRDVVQDLANRIHLFGLFGYSYNLSNKDGKNPEENYKYCENELYGNAILSRYPILN---- 129

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
             +++ +         +     +  L  E  +I     ++                   +
Sbjct: 130 --VSTIQLPRPTGSADQRGVVIADILLPEGKIIRVACTHLDHVGGQLEQAA-----VLTS 182

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSL 235
            EV+ +       G  +    +     L + +D   +      G+ +ID I+ +      
Sbjct: 183 DEVKSNTYPTILCGDMNVGPNSDVIKKLLTVYDRLDNDSGTYLGLSKIDFILGTKG-KWE 241

Query: 236 LHSARIDTKPRGWTKPSDHTPVI 258
           L S ++  +     + SDH PV+
Sbjct: 242 LKSCKVLDRHLNGKELSDHCPVV 264


>gi|291396737|ref|XP_002714939.1| PREDICTED: sphingomyelin phosphodiesterase 2, neutral-like
           [Oryctolagus cuniculus]
          Length = 423

 Score = 56.3 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 45/295 (15%), Positives = 89/295 (30%), Gaps = 39/295 (13%)

Query: 9   WNVN--SI------RA-RIHNLAAWIKENNPDIICLQETKT-EDKNFPFETLQS-LNYHI 57
           +N+N   I      RA R+  L  ++   + D+  LQE  + +D  +  + L        
Sbjct: 12  FNLNYWGIPYLSKHRAARLTRLGDFLNLESFDLALLQEVWSEQDFQYLKQKLSPTYPAAH 71

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN------- 110
                   +G+ + SK+   +   H+   +           F      L + +       
Sbjct: 72  YFRSGIIGSGLCVFSKHPIQDTTQHVYTLNGYPYMIHHGDWFCGKAVGLLVLHLSGLVVN 131

Query: 111 ----LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
                     +         +++       F     +  + ++  GD N+ P+   C   
Sbjct: 132 AYVTHLHAEYSRQKDIYLAHRVAQAWELAHFIHHTSKKADVVLLCGDLNMHPKDLGCRLL 191

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226
             W       LE +  FQ  +                L          +    GIRID++
Sbjct: 192 KEWTGLFDAYLEAQD-FQGSEEGCTMVPGNCYVSQQDL--------KLFP--CGIRIDYV 240

Query: 227 MLSPEATSLLHSARIDT-----KPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQ 276
           +       L  S +         P   +  SDH  ++ +L +     +Q  S + 
Sbjct: 241 LY-KAVPGLCISCKTFRTTTGHDPHNGSPLSDHEALMATLCVRHSPPQQNPSPTP 294


>gi|118385793|ref|XP_001026022.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena
           thermophila]
 gi|89307789|gb|EAS05777.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena
           thermophila SB210]
          Length = 354

 Score = 56.3 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 52/289 (17%), Positives = 101/289 (34%), Gaps = 34/289 (11%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTED-KNFPFETLQSLNYHIET--CGQKSYNGVAILSK 73
           R   +   IK  N DI+CLQE   +  ++F ++  Q L Y I+      ++   + +  K
Sbjct: 46  RKWKIVEEIKLINSDIVCLQE--ADHIEDFYYQQFQDLGYQIQYALKPYRAEGILVMFKK 103

Query: 74  YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY---------LPHGNPITSTKY 124
            +   I  H+   D ++   F +A +  N   L I   +                     
Sbjct: 104 DKFKMISEHVINFDNEIPDTFNKANYQRNNNALIIQLKHLISDLNIVIANTHLFWNPQNE 163

Query: 125 DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ 184
           + K+    + L+  ++  + +E +I  GD+N +P  +        +      +E + +  
Sbjct: 164 EVKLLQTAQILQHLTKNYKQDENIILCGDFNSMPTSNVIKYITDKKEPHLSRVEKQFAKY 223

Query: 185 --KLQNMGFTDAIRATHDTHHLYSFWDYYADSW--------SKNKGIRIDHIMLSPEAT- 233
                 M   +     +      S+ DY                KG  +D+I+ +P    
Sbjct: 224 VLIKDMMAIHNMFSEMNLIDLKSSYDDYLKTGKHPEFTNYTQNFKGT-LDYILFNPNMKQ 282

Query: 234 ---SLLHSARID-----TKPRGWTKPSDHTPVIVSLDIPEPRKKQQDST 274
              S +    ID             PSDH P+     I +  + Q+ ++
Sbjct: 283 FQLSEVREIPIDLIKKQKGLPSQDYPSDHLPITAIFSINQDGQDQKQNS 331


>gi|86131717|ref|ZP_01050314.1| endonuclease/exonuclease/phosphatase family protein [Dokdonia
           donghaensis MED134]
 gi|85817539|gb|EAQ38713.1| endonuclease/exonuclease/phosphatase family protein [Dokdonia
           donghaensis MED134]
          Length = 343

 Score = 56.3 bits (134), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 46/274 (16%), Positives = 75/274 (27%), Gaps = 47/274 (17%)

Query: 3   VVTVATWNV------------N-SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFET 49
            +T+ T+NV            N   RA      A+I++ NPDI+CLQE        P   
Sbjct: 99  TLTLLTYNVRQFNVYGWVEEANVGKRA-----IAFIEDQNPDIVCLQEYH------PDFE 147

Query: 50  LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
           L +  Y  +    +  N       +    IV     D        I A   +   T+R  
Sbjct: 148 LDAKKYPFKHKVMRPANSKFGQVIFSKFPIVHSGSLDFGKKGNNGIYADIKVGEDTIRAY 207

Query: 110 NLYLPHGNPITS-TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168
           N++        S      + S         +   +  +   F       P          
Sbjct: 208 NMHFQSFRLSPSLNNLQKENSKKLLGRLGVAFEKQEGQVKKFLQSEAASPHKVIVAGDFN 267

Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
                           +       DA            ++D           +RID I+ 
Sbjct: 268 NS--------ATSYMYRKVRGDKVDAFAKAGSGTGATFWFDIIP--------LRIDFILA 311

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
             +         +D +  G    SDH P + +  
Sbjct: 312 DEQLE------VLDFETYGDIDLSDHKPSMATFK 339


>gi|254248065|ref|ZP_04941386.1| Metal-dependent hydrolase [Burkholderia cenocepacia PC184]
 gi|124872841|gb|EAY64557.1| Metal-dependent hydrolase [Burkholderia cenocepacia PC184]
          Length = 327

 Score = 55.9 bits (133), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 41/303 (13%), Positives = 81/303 (26%), Gaps = 61/303 (20%)

Query: 2   SVVTVATWNV------NSI----R--ARIHNLAAWIKENNPDIICLQE-TKTED------ 42
           S + +  WN+      + +    R  A I  L  +      D++CLQE T+  D      
Sbjct: 42  STMRLIDWNIQWGRDADGVVDLPRTVAAIRRLGDF------DVLCLQELTRGFDALPGRP 95

Query: 43  --KNFPFETLQSLNYHIE-----------TCGQKSYNGVAILSKYQPIEIVTHLPGDD-- 87
               F         Y I                +   G AI ++     ++         
Sbjct: 96  GPDQFAELAALLPGYTIVDAIGADLPAIRPGAPRRQFGNAIATRLPVGRVLRQSLPWPAD 155

Query: 88  ---LDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL 144
                +    ++     +  +LR+   +L + +        D +    R     + +   
Sbjct: 156 AGAPSMPRAALDIELQASFGSLRVVTTHLEYYSARQRLAQVDALRDRHREACAHADQPAP 215

Query: 145 EEPLIFAGDYNIIPQPHDCYNPIIWENDACFT----LEVRQSFQKLQNMGFTDAIRATHD 200
            E           P+            D+         +  +   +              
Sbjct: 216 AETPEGPFSATGQPRDAIVCGDFNSAFDSDAYRRFLEPIADAPGFVDAWIARHPGHTPPP 275

Query: 201 THHLY-S-FWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVI 258
           T  +Y +  W     +         D + ++      +    ID   R     SDH PV+
Sbjct: 276 TAGIYDTVQWSDGPLA--------CDFVFVTDTLLPRVIGCEIDGDVR----ASDHQPVL 323

Query: 259 VSL 261
           + L
Sbjct: 324 LEL 326


>gi|225448081|ref|XP_002273589.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 1715

 Score = 55.9 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 24/245 (9%), Positives = 64/245 (26%), Gaps = 28/245 (11%)

Query: 16  ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75
           ++   + A I+    D+ CLQETK +        ++SL                     +
Sbjct: 778 SKRKVIKALIRSQRVDVFCLQETKIQA--MSEGVVRSLG----------TGRFLGWGALE 825

Query: 76  PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135
                  +           ++      + + R+ N+        T           +   
Sbjct: 826 ASGSAGGILVCWDRRMMDVLDVEVGQFSISCRVRNVEDGFCWMFTGVYGPFSRDERECLW 885

Query: 136 RFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAI 195
                           G +++       +N  + + +      + ++ ++   M     +
Sbjct: 886 EELGAIR---------GLWDVPWCLGGDFNITLLQGERSRQGRITRAMRRFAQMVDELEL 936

Query: 196 RATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHT 255
                     ++              R+D  +++              + R     SDH 
Sbjct: 937 TDLPLQGGRCTW----NGGRGSQSWARLDRFLVTQNWLDHFSGVV---QSRLPRPTSDHF 989

Query: 256 PVIVS 260
           P+++ 
Sbjct: 990 PILLE 994


>gi|307720642|ref|YP_003891782.1| Endonuclease/exonuclease/phosphatase [Sulfurimonas autotrophica DSM
           16294]
 gi|306978735|gb|ADN08770.1| Endonuclease/exonuclease/phosphatase [Sulfurimonas autotrophica DSM
           16294]
          Length = 338

 Score = 55.9 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 49/323 (15%), Positives = 86/323 (26%), Gaps = 72/323 (22%)

Query: 2   SVVTVATWNV--------NS------------------IRARIHNLAAWIKENNPDIICL 35
             + +AT+NV        N                    + ++ N+A  IK+ NPDII L
Sbjct: 18  KTLKIATYNVENLFDLQRNGHEYKEYIPYTKSNWNDTNYKVKLKNIAKVIKDMNPDIIGL 77

Query: 36  QET------KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLD 89
           QE       K        E++    Y+     +++   VAILSK   +            
Sbjct: 78  QEIESLQALKDLRYALKRESI-YYQYYKIANLKRTTVKVAILSKIPFVYTHEIAVTSSYR 136

Query: 90  VQARFIEATFTINTQTLRIGNLYLPHGNPITSTK-----YDDKISWIKRFLRFASQRLEL 144
            +          N     + N +     P +           ++  +       +     
Sbjct: 137 YRNILEAKFKINNEDLYVLVNHWKSKAGPESMRIVSAKKLKKRMQELGAKKNIIALGDLN 196

Query: 145 EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL 204
            +   +                 I         +      K+ +    +      D+   
Sbjct: 197 SDYEEYKIFKRKRKHNDTDGITGINHILGTINYQQDAKHTKIDSDELYNLW-YDTDSAKR 255

Query: 205 YSFWDYYADSWSKNKGIRIDHIMLSPEATS------LLHSARIDTKPR------------ 246
           YS+  Y     +      +D+I++S            LHS  +  KP             
Sbjct: 256 YSYI-YRGKKEA------MDNILISAALLDKKGLDYKLHSISVYEKPYLFKGKSIFRWQT 308

Query: 247 --------GWTKPSDHTPVIVSL 261
                        SDH PVI   
Sbjct: 309 TRSRLRRHKGKGYSDHLPVIAEF 331


>gi|149279450|ref|ZP_01885580.1| hypothetical protein PBAL39_16661 [Pedobacter sp. BAL39]
 gi|149229743|gb|EDM35132.1| hypothetical protein PBAL39_16661 [Pedobacter sp. BAL39]
          Length = 304

 Score = 55.9 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 43/294 (14%), Positives = 75/294 (25%), Gaps = 51/294 (17%)

Query: 6   VATWNV-----------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           +AT+NV           N    R+  +   I+ ++ DI   QE   +  N     L    
Sbjct: 24  IATYNVRYKNSGDEKNGNGWSQRMPVVTDIIQFHDFDIFGAQEILQQQLNDLDSKLTGYG 83

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
            H+                +   +    L   +  +  +        +    RI +    
Sbjct: 84  -HVGVGRDDGKRAGEHAMIFYKKDKFKLLDSGNFWLSKQEDVPNKGWDAALPRICSWGAF 142

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
                    Y                    E   +       I           +  +  
Sbjct: 143 QHLASGRKFYFFNT-----HFDHVGVVARRESAKLILRKIRAIAGDTPTILTGDF--NVD 195

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
            T E+       Q     +     + T+   + +D    + S     RIDHI+LS     
Sbjct: 196 QTNEIYGILTGQQLADAFETTAFRYATNGTINHFDINTKTKS-----RIDHILLSKSI-- 248

Query: 235 LLHSARIDTK-PRGWTK------------------------PSDHTPVIVSLDI 263
            +    + T   R   K                        PSDH PV+  +D+
Sbjct: 249 KVKRYGVLTDTYRSAGKENAEVSTSGNFPKEVSLQRYEARLPSDHFPVMAVIDL 302


>gi|282880539|ref|ZP_06289246.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           timonensis CRIS 5C-B1]
 gi|281305642|gb|EFA97695.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           timonensis CRIS 5C-B1]
          Length = 361

 Score = 55.9 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 34/267 (12%), Positives = 78/267 (29%), Gaps = 18/267 (6%)

Query: 4   VTVATWNV---NSI--RARIHNLAAWIKENNPDIICLQE---TKTEDKNFPFETLQSLNY 55
           + V ++NV        + + + +  +++  N DI+CLQE   T+   +          ++
Sbjct: 101 IKVLSYNVWYFAGWEDKGKANPILTYLRAQNADIVCLQEAETTEVGKERIEAALNPIYSF 160

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
           H  +  +K  + +AI SK+  ++        + +    F           +      +  
Sbjct: 161 HDFSLTEKGSDRMAIYSKFPILKKEAIHYPSEGNHSTAFFLDIKGDTVIVINNHLESIGL 220

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
                 +        ++        +    +            +    Y     +     
Sbjct: 221 TEEDKDSFKGMVKGELETDSIKIGSKSLYHKLANATKIRAPQAKAVAQYIEQHQDKTIIL 280

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
             +                +R  +          Y+   +     +RID +M S      
Sbjct: 281 CGDFNDGPNSFARRTIAKHLRDCYIETGNGPGISYHLGGFY----VRIDQLMCSKNLKPY 336

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262
               ++D K     K SDH P+   L+
Sbjct: 337 --HCQVDNKI----KTSDHYPIYCWLE 357


>gi|296169146|ref|ZP_06850802.1| endonuclease/exonuclease/phosphatase [Mycobacterium
           parascrofulaceum ATCC BAA-614]
 gi|295896195|gb|EFG75859.1| endonuclease/exonuclease/phosphatase [Mycobacterium
           parascrofulaceum ATCC BAA-614]
          Length = 254

 Score = 55.9 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 32/271 (11%), Positives = 77/271 (28%), Gaps = 31/271 (11%)

Query: 4   VTVATWNV-------NSIRARIHNLAAWIKENNPDIICLQET-----KTEDKNFPFETLQ 51
           + VAT+N+       + +   +  L   ++  +PD++ LQE      ++E  +      +
Sbjct: 1   MRVATFNILHGRTVGDGV--ELQRLRDCVRRLDPDVLSLQEVDCDQPRSERADLTAVAAE 58

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
           ++         +    ++       +                 +      + Q +R+  +
Sbjct: 59  AMG----AVEHRFVAAISGTPGATWMAATGREQPGTAAYGIALLSRYPVASWQVVRLPRI 114

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
            +     +        +    R    A  R  +    +     + +P  +      +  +
Sbjct: 115 PMRFPMYLPGPNRVMVVDEEPRAAVIAQLRTPMGGLTVANTHLSFVPGWNRRQLRRLVHD 174

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
              F      +                       +F    A          +DHI+    
Sbjct: 175 LRGFPGPRLLTGDLNMTPKTVRRWSGMRALASAVTF-PADAPDRQ------LDHILTDDR 227

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
               L    +  +P G    SDH P++V L+
Sbjct: 228 ---RLRGGAVAAEPMGI---SDHRPLVVDLE 252


>gi|269127256|ref|YP_003300626.1| endonuclease/exonuclease/phosphatase [Thermomonospora curvata DSM
           43183]
 gi|268312214|gb|ACY98588.1| Endonuclease/exonuclease/phosphatase [Thermomonospora curvata DSM
           43183]
          Length = 235

 Score = 55.9 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 36/267 (13%), Positives = 73/267 (27%), Gaps = 36/267 (13%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           M  + V ++N+ S+R     L   I+    D++CLQE        P     +        
Sbjct: 1   MRRLRVLSYNIRSMRDDRAALVRVIRACAADLVCLQEV-------PRLA-PTWRARRRAL 52

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
             ++   VA   +   + ++          +   +     ++ + L +    +     I 
Sbjct: 53  AARTGLTVACGRRAAGLAVLAGRRVRLHHAEHHLLSRVPGLHRRGLALVVAEIAGARVIV 112

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
           +  + D  +  +         L       +               P++   D     E  
Sbjct: 113 ADTHLDLDASARLAHTAELLALLKRARDRY-------------EAPVVLCGDINEEPEGP 159

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
                        A             +     +       RID I   P     +    
Sbjct: 160 SWNALTGFFTDAYAAAPRGPAAT----YSSRRPAR------RIDGIFTDPRIE--VLGCG 207

Query: 241 IDTKP---RGWTKPSDHTPVIVSLDIP 264
           +   P     + + SDH PV+  L +P
Sbjct: 208 LPPGPAPAADYPRASDHLPVLAELRLP 234


>gi|118150942|ref|NP_001071387.1| bucentaur-2 [Bos taurus]
 gi|117414086|dbj|BAF36506.1| p97Bucentaur-2 [Bos taurus]
 gi|151556961|gb|AAI49203.1| Bucentaur-2 [Bos taurus]
 gi|296478240|gb|DAA20355.1| bucentaur-2 [Bos taurus]
          Length = 634

 Score = 55.9 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 35/263 (13%), Positives = 64/263 (24%), Gaps = 27/263 (10%)

Query: 6   VATWNVNSIRARIHNLAAWIKEN----NPDIICLQETKTE-DKNFPFETLQSLNYHIETC 60
           + TWNV S+          +K+     N DI+ + E K         +       H    
Sbjct: 247 IGTWNVRSMN---PGKLDVVKQEMERINIDILGISELKWTGMGELNSDD------HYIYY 297

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
             +       ++      +   + G +L                   I         P  
Sbjct: 298 CGQQSLRRNGVAIIVNKRVRNAVIGCNLKNDRMISVRFQGKPFNLTVIQVYAPTPYAPEP 357

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
                 +       +      L +            IP+    +   +        +E  
Sbjct: 358 EVYRFYEDLQHLLEITPKIDVLFIIGDWNAKVGSQEIPRITGKFGLGVQNEAGRRLIE-- 415

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
                 QN               LY++         +     ID+I+      S + SA+
Sbjct: 416 ---FCYQNRLVIANTLFQQHKRRLYTWTSPDGRYRDQ-----IDYIICRQRWRSSVQSAK 467

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263
                 G    SDH  +I    +
Sbjct: 468 TRP---GADCGSDHKLLIAKFRL 487


>gi|73540148|ref|YP_294668.1| endonuclease/exonuclease/phosphatase [Ralstonia eutropha JMP134]
 gi|72117561|gb|AAZ59824.1| Endonuclease/exonuclease/phosphatase [Ralstonia eutropha JMP134]
          Length = 262

 Score = 55.9 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 36/272 (13%), Positives = 68/272 (25%), Gaps = 40/272 (14%)

Query: 1   MSVVTVATWNVN----SI--RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           M  + V T+N++     I  R RI N+ A +   + DI+ LQE +  +       L    
Sbjct: 1   MMKLRVVTYNIHKGVTGIARRPRIQNVRAGLHAMDADIVFLQEVQDRNDRLVAAAL---- 56

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL- 113
                    +         Y       +   +        +     + ++ L I +    
Sbjct: 57  ----FDPDHTQLNYLATDSYPHSVYGRNAVYEHGHHGNAILSRHPILMSENLDISDHRFE 112

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
             G        +   + +         R    +          +             ND 
Sbjct: 113 QRGLLHAVADVNGVEAHLICVHFGLFARSRARQAEALVERVRTVVPSTAPLVIAGDFNDW 172

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
              L+ +                  H       +W              +D I       
Sbjct: 173 NHRLDSQICNTLGAVEASHARGARLHTFPSHMPWWQ-------------LDRIY------ 213

Query: 234 SLLHSARIDTKP----RGWTKPSDHTPVIVSL 261
             +    I+       R W + SDH P++  L
Sbjct: 214 --VRGFEIERAHALTGRDWAQRSDHVPLVAEL 243


>gi|225436869|ref|XP_002271044.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 469

 Score = 55.9 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 77/253 (30%), Gaps = 19/253 (7%)

Query: 15  RARIHNLAAWIKENNPDIICLQETKTEDKNF-----PFETLQSLNYHIETCGQKSYNGVA 69
           R+R   +   ++E + DI+ LQ+ K E++              +NY +         G A
Sbjct: 192 RSR-RTVVEVLRELDADILALQDVKAEEEKAMKPLSDLAAALGMNY-VFAESWAPEYGNA 249

Query: 70  ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKIS 129
           ILSK+           DD D +              +     +L H +     K  + I 
Sbjct: 250 ILSKWPIKRWKVQKIFDDTDFRNVLKATIDVPQAGEVNFHCTHLDHLDENWRMKQINSII 309

Query: 130 WIKRFLRFASQRLEL-EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN 188
                    +  L   +E    +  +  I + ++       + +    L+ +Q       
Sbjct: 310 QSNEGPHILAGGLNSLDETDYSSERWTDIVKYYEEMGKPTPKVEVMKFLKSKQYTDAKDF 369

Query: 189 MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGW 248
            G  +++                        G R+D+I+ SP +                
Sbjct: 370 AGECESVVMIAKGQ------SVQGTCK---YGTRVDYILASPSSPYKFVPGS--YSVFSS 418

Query: 249 TKPSDHTPVIVSL 261
              SDH  V V +
Sbjct: 419 KGTSDHHIVKVDI 431


>gi|331243524|ref|XP_003334405.1| CCR4-NOT transcription complex [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309313395|gb|EFP89986.1| CCR4-NOT transcription complex [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 786

 Score = 55.9 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 42/276 (15%), Positives = 75/276 (27%), Gaps = 35/276 (12%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTED-KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75
           R   +   + +   DIICLQE   E  ++F  ++L+   Y      +     +       
Sbjct: 512 RKDLILQELMQYGADIICLQEVDVEQYEDFFVQSLKDQGYEGVFYPKSRARTMESHKTED 571

Query: 76  PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN---------------LYLPHGNPIT 120
               V       +       ++        + I                 +         
Sbjct: 572 MFNRVMTKDNIAVIALLEHRQSGTRQIVANVHIHWDPEFRDVKLIQTAMLMDQISEISSR 631

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +   + +    +    S     + P I  GD+N IPQ         + +         
Sbjct: 632 FARLPKRTNLSNNYRTAPSYSDGTQIPTIICGDFNSIPQS----GVYDYLSQGLIPSTHP 687

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN----KGIRIDHIMLSPE----- 231
              +          I  +      YS  D     ++      KG+ ID+I  S E     
Sbjct: 688 DFCKNNYGPYTQFGIHHSLKLKSAYSNLDSKELPFTNYTPGFKGV-IDYIWYSTESLQVI 746

Query: 232 -ATSLLHSARIDTKPRGWT---KPSDHTPVIVSLDI 263
                +  A    K  G+      SDH PV+    +
Sbjct: 747 GLLGKIDDAY-LKKVVGFPNAHFASDHVPVLAEFKV 781


>gi|182626212|ref|ZP_02953970.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens D str. JGS1721]
 gi|177908476|gb|EDT71009.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens D str. JGS1721]
          Length = 262

 Score = 55.9 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 47/276 (17%), Positives = 80/276 (28%), Gaps = 28/276 (10%)

Query: 1   MSVVTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51
           M  + V T+N+         N    R   +   IK++ PDII  QE      +   + L 
Sbjct: 1   MRNLKVMTFNLKYDFKAQDNNEWSQRCLRITKLIKDHLPDIIGTQEGLIHMLDDMDDLLD 60

Query: 52  SLNY---HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108
             ++    +E  G+  +N +  L     +                  +   ++     ++
Sbjct: 61  EYSWVGEDLEGNGKDEFNAIFFLKNKFEVLEWNQFWLSKTPNIKGSKDFNSSLPRICTKL 120

Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL-EEPLIFAGDYNIIPQPHDCYNPI 167
                  G  I                      L+  ++         II    +CY   
Sbjct: 121 KLKDKISGLKIDIYNTHLDHESELAREEGIKIILKEVKKNYEIYKTPYIIMGDFNCYLED 180

Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227
              N           F    +    + +   H     Y              G  ID+I+
Sbjct: 181 NLFNIIREEETNNTCFNVCYDNIKNNILGTFHYFKGGY-------------DGRIIDYIL 227

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            S E    + S  ID +      PSDH PVI  L++
Sbjct: 228 YSKEYE--IKSLNIDNRKINGGYPSDHYPVICELEL 261


>gi|163790442|ref|ZP_02184873.1| hypothetical protein CAT7_03019 [Carnobacterium sp. AT7]
 gi|159874346|gb|EDP68419.1| hypothetical protein CAT7_03019 [Carnobacterium sp. AT7]
          Length = 271

 Score = 55.9 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 38/279 (13%), Positives = 74/279 (26%), Gaps = 31/279 (11%)

Query: 4   VTVATWNVNS-------IRARIHNLAAWIKENNPDIICLQE-----TKTEDKNFPF---- 47
           +   T N +S       I+  + NL   I   + D+I LQE     T             
Sbjct: 1   MKFLTLNTHSWMEKDPLIK--LKNLCDAITRQSFDVIALQEVNQLMTSATVDQSLLVTFS 58

Query: 48  -----ETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN 102
                  ++  N+      +   NG+     ++P  I      + L V +          
Sbjct: 59  ATNNEHPIKEDNFAFLLQQELQKNGLEYYWTWEPSHIGYDRYDEGLAVLSLKPIQETRSF 118

Query: 103 TQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD 162
             +             I     +     +              +       +  +     
Sbjct: 119 FASENTAYNDYKSRKVIGIKSENQWFFNVHLGWWQDKHDPFPGQWKKCTAHFATL----- 173

Query: 163 CYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR 222
              PI    D      ++Q   +L    + D           ++  D          G+R
Sbjct: 174 -KEPIFLLGDFNNPAHIKQEGYELVTQNWFDTYHLAAQKDTGFTVADAIDGWSENQSGLR 232

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           ID+I  +        S+++          SDH  ++V +
Sbjct: 233 IDYIFANQPV--KTISSQVIFNDNNEPIISDHFGIVVEI 269


>gi|163796022|ref|ZP_02189985.1| Endonuclease/exonuclease/phosphatase [alpha proteobacterium BAL199]
 gi|159178777|gb|EDP63315.1| Endonuclease/exonuclease/phosphatase [alpha proteobacterium BAL199]
          Length = 248

 Score = 55.9 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 31/264 (11%), Positives = 67/264 (25%), Gaps = 41/264 (15%)

Query: 3   VVTVATWNVN---S--IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57
           ++ VA++N+       +R R   + A + E + D++ LQE                 +  
Sbjct: 1   MLRVASYNICKSVGTDLRRRPDRVLAVLGELDADVVALQEV-------------DRRFGA 47

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
                   + VA  S       V                    ++ + L + +       
Sbjct: 48  RASVLSPDSIVAETSFKPVRFGVRPDSLGWHGNALLIGRDVEVLSHRRLELPSFEPRGAI 107

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
                     I  +   L         +   +      +           +      +TL
Sbjct: 108 LADLRVRGTAIRVLGMHLGLLGLWRRRQARAVLMTLEALEEPLPTVMMGDLN----EWTL 163

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
                    ++       ++ H    + +                +D I+ S +    + 
Sbjct: 164 GGGCLAMFAKHHHVAVPGQSFHSRRPIAT----------------LDRIITSLDL--RVE 205

Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261
            A +          SDH PV  S+
Sbjct: 206 DAGVHVSA-KSRVASDHLPVWASI 228


>gi|147844782|emb|CAN79044.1| hypothetical protein VITISV_043757 [Vitis vinifera]
          Length = 1256

 Score = 55.9 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 31/263 (11%), Positives = 71/263 (26%), Gaps = 38/263 (14%)

Query: 3   VVTVATWNV-----NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57
            + V +WNV     NS R  I  +   I+    D+ C+Q TK +                
Sbjct: 536 TLRVLSWNVRGANDNSKRKVIKAM---IRSQRVDLFCIQGTKIQ---------------- 576

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
                    GV              +                ++    + +G   +    
Sbjct: 577 -----TMSEGVVRSVGSGRFLDWGAMGAQGSTGGILICWDKRSLELLEMEVGQFSISCRL 631

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
                        +        +    EE     G ++        +N  + + +     
Sbjct: 632 KNVEDGLVWIFIGVYGPFTRKERESMWEELGAIRGIWDDPWCVGGDFNVTLSQRERSSQG 691

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLL 236
            +  + ++   +     +        ++S+ +        N+   R+D  +++     L 
Sbjct: 692 SLNGAMRRFAQVVDDLELLDLPLQGVVFSWSEGR-----NNQSWARLDRFLVTQSWLDLF 746

Query: 237 HSARIDTKPRGWTKPSDHTPVIV 259
                  + R     SDH P+++
Sbjct: 747 RGVV---QSRLPRPTSDHFPILL 766


>gi|309804836|ref|ZP_07698898.1| conserved hypothetical protein [Lactobacillus iners LactinV
          09V1-c]
 gi|309809773|ref|ZP_07703627.1| conserved hypothetical protein [Lactobacillus iners SPIN
          2503V10-D]
 gi|308165775|gb|EFO67996.1| conserved hypothetical protein [Lactobacillus iners LactinV
          09V1-c]
 gi|308169952|gb|EFO71991.1| conserved hypothetical protein [Lactobacillus iners SPIN
          2503V10-D]
          Length = 96

 Score = 55.9 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 32/86 (37%), Gaps = 17/86 (19%)

Query: 4  VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDK-------NFP 46
          +   +WN++S+ A +            +   IK+ NPD++ +QETK           +  
Sbjct: 1  MLFISWNIDSLNAALTGDSDRANETRSVLNKIKKANPDVVAIQETKLRANGPTKKHCDIL 60

Query: 47 FETLQSLNYHIETCGQKSYNGVAILS 72
           +  +   Y   +  + +    A   
Sbjct: 61 ADIFEDYQYVWRSSQEPARKSYAGTM 86


>gi|290998796|ref|XP_002681966.1| predicted protein [Naegleria gruberi]
 gi|284095592|gb|EFC49222.1| predicted protein [Naegleria gruberi]
          Length = 354

 Score = 55.9 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 42/262 (16%), Positives = 74/262 (28%), Gaps = 33/262 (12%)

Query: 25  IKENNPDIICLQETKTED--KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTH 82
           IK+ N D+ICL E ++     +F  + LQS+NY               +       IV  
Sbjct: 104 IKQVNADVICLMEVESLQVLDSFNEKYLQSMNYAYSILIDGRDPRSIDVGVLSRYPIVNI 163

Query: 83  LPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRL 142
                           F+ +   L I       GN   +       S  K       +RL
Sbjct: 164 RSNRHATYPGEKTRYIFSRDLLELDIE----FPGNNNLTIYATHLTSMSKGREESKDRRL 219

Query: 143 ELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC-FTLEVRQSFQKLQNMGFTDAIRATHDT 201
                           +  +     I   D   +        + L++    D I     +
Sbjct: 220 VQ--VDYICDRIEKSWKDKNYKGNFIVLGDMNDYNDSETSLGKLLKHDHMADIISQRLPS 277

Query: 202 HHLYSFWDYYADSWSKNKGIRIDHIMLSPEA-------------------TSLLHSARID 242
              ++ +    +++++     +D++ +S                             RI 
Sbjct: 278 DEQWTHYYNRGNAYNQ-----LDYMFISKHLLLRNPRAKPVIFRKGLPKRAHSFTGKRIK 332

Query: 243 TKPRGWTKPSDHTPVIVSLDIP 264
              +   K SDH PV V L   
Sbjct: 333 GVGQNEPKASDHCPVYVDLSFD 354


>gi|94497212|ref|ZP_01303784.1| metal-dependent hydrolase [Sphingomonas sp. SKA58]
 gi|94423317|gb|EAT08346.1| metal-dependent hydrolase [Sphingomonas sp. SKA58]
          Length = 232

 Score = 55.9 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 40/272 (14%), Positives = 71/272 (26%), Gaps = 48/272 (17%)

Query: 1   MSVVTVATWNVNSIRARI--------HNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52
           M  + VA++N   IR  I          +   + E + DII LQE             + 
Sbjct: 1   MKTIRVASYN---IRKAIGTDRRRIPERVLEVLGEVDADIIALQE-----------ADRR 46

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
                          +    K  P+ I T   G   +      EA   ++          
Sbjct: 47  FGVRSAAIPPLLL-DMLSGYKSVPLNIQTDSMGWHGNAILVRKEAEIGVH---------- 95

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
               + +     + + + +                L  +G +                  
Sbjct: 96  ----DVLHLPYLEPRGATMAEITAKDITVRVFGMHLDLSGLWR--------RRQAAAVIH 143

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
           A    E   +        ++       D    YSF        ++    R+D IM   + 
Sbjct: 144 AAAQGESLPTILMGDLNEWSANGGCLADFGRHYSFAPCGRSFHARRPVARLDRIMHCSQL 203

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
           T  L +  +        K SDH P+     + 
Sbjct: 204 T--LKTCGVHESA-AARKASDHLPIWAEFSVD 232


>gi|225425732|ref|XP_002271092.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 216

 Score = 55.9 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 24/239 (10%), Positives = 61/239 (25%), Gaps = 29/239 (12%)

Query: 4   VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + TWNV      ++   +  +I+    D++C+QETK ++                   
Sbjct: 3   MKIITWNVRGANDSSKRKIIKNYIRNQRVDLMCIQETKIQE------------------- 43

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
                G+              L  +              +       G   L        
Sbjct: 44  --MSEGIVRSLGSGRFLDWRALNAEGAAGGILICWDKRVLEILDWEEGQFSLSCRFKTIE 101

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
                  + +        +    EE     G ++        +N  +++++         
Sbjct: 102 NGATWVFTGVYGPFTKVEREGMWEELGAIRGLWDDPWCLGGDFNITLFQHERSSQRRTSS 161

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSA 239
           + ++         +         +++          N+   R+D  ++SP         
Sbjct: 162 AMRRFAEFVDDLELVDLTLQGGEFTW-----SGGLNNQAWARLDRFLVSPSWLDQFSGV 215


>gi|309804030|ref|ZP_07698111.1| conserved hypothetical protein [Lactobacillus iners LactinV
          11V1-d]
 gi|309807800|ref|ZP_07701732.1| conserved hypothetical protein [Lactobacillus iners LactinV
          01V1-a]
 gi|308163798|gb|EFO66064.1| conserved hypothetical protein [Lactobacillus iners LactinV
          11V1-d]
 gi|308168902|gb|EFO70988.1| conserved hypothetical protein [Lactobacillus iners LactinV
          01V1-a]
          Length = 96

 Score = 55.9 bits (133), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 32/86 (37%), Gaps = 17/86 (19%)

Query: 4  VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDK-------NFP 46
          +   +WN++S+ A +            +   IKE NPD++ +QETK           +  
Sbjct: 1  MLFISWNIDSLNAALTGDSDRAHETRSVLNKIKEANPDVVAIQETKLRANGPTKKHCDIL 60

Query: 47 FETLQSLNYHIETCGQKSYNGVAILS 72
           +  +   Y   +  + +    A   
Sbjct: 61 ADIFEDYQYVWRSSQEPARKSYAGTM 86


>gi|325929159|ref|ZP_08190302.1| metal-dependent hydrolase [Xanthomonas perforans 91-118]
 gi|325540478|gb|EGD12077.1| metal-dependent hydrolase [Xanthomonas perforans 91-118]
          Length = 287

 Score = 55.9 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 36/269 (13%), Positives = 70/269 (26%), Gaps = 26/269 (9%)

Query: 5   TVATWNV------NS---IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55
            V ++NV      +     + R   + A IK+ +PD+   QE  +E   F  E L    Y
Sbjct: 35  RVMSFNVRVPADTDGDKRWQVRRAAMVALIKQTHPDVFGTQELVSEQAAFLAEQLPD--Y 92

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
                G++  +    +  +    ++  +   +  +      A        L     +   
Sbjct: 93  RWFGQGRRGDDSDEHMGVFYDARVLKVVESGNFWLSDTPERAGSITWGNVLPRMATWALF 152

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
                  ++   +       R   +        +       +P          + +D   
Sbjct: 153 ERRSDKRRF--YLFNTHFPYRDEDEPARERSARLILSRIAQLPATVPVVLTGDFNSDPDK 210

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
                 +                 +T   ++               RID I+        
Sbjct: 211 ITYPTLTAVLRDARAQASKRSGPENTFQDFTTHPTR----------RIDWILY-RGLRP- 258

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
                      G   PSDH PV+   D P
Sbjct: 259 -TRFATLDDRPGGILPSDHYPVMAEFDWP 286


>gi|147788325|emb|CAN69965.1| hypothetical protein VITISV_039410 [Vitis vinifera]
          Length = 596

 Score = 55.9 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 24/41 (58%), Gaps = 2/41 (4%)

Query: 3  VVTVATWNVNSI--RARIHNLAAWIKENNPDIICLQETKTE 41
          ++ + +WNV  +  R++   + + IK    D+ C+QETK +
Sbjct: 2  ILRILSWNVRGVNDRSKRKIIKSVIKNQKVDLFCIQETKVQ 42


>gi|37523648|ref|NP_927025.1| hypothetical protein gll4079 [Gloeobacter violaceus PCC 7421]
 gi|35214653|dbj|BAC92020.1| gll4079 [Gloeobacter violaceus PCC 7421]
          Length = 278

 Score = 55.9 bits (133), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 29/65 (44%), Gaps = 3/65 (4%)

Query: 4   VTVATWNV---NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           + + +WNV   N  R       + ++   PDI+ LQE + + +      L  +++ +   
Sbjct: 42  LKILSWNVAKSNHDRRFTREFLSILEREQPDIVFLQEVRVDAETMRAVDLAGMHWSVAPN 101

Query: 61  GQKSY 65
            + ++
Sbjct: 102 YKDTH 106


>gi|319781575|ref|YP_004141051.1| endonuclease/exonuclease/phosphatase [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317167463|gb|ADV11001.1| Endonuclease/exonuclease/phosphatase [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 300

 Score = 55.6 bits (132), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 39/310 (12%), Positives = 81/310 (26%), Gaps = 61/310 (19%)

Query: 4   VTVATWNV------NSI----RARIHNLAAWIKENNPDIICLQET--KTEDKNFPF--ET 49
           + + ++N+      +      RA    + A       D+I LQE     +  NF    E 
Sbjct: 1   MKLVSYNIQYGFGGDGCYDLSRAA--RIVA-----GADVIALQEVERHWQRSNFDDQPEL 53

Query: 50  LQSL--NYHIETCGQKSYNG--------------VAILSKYQPIEIVTHLPGDDLDVQAR 93
           L SL  +YH         +                  +   +   + + L    +    R
Sbjct: 54  LSSLLPDYHWVYGPAFDMDASERHDGRLVNRRRQFGTMVLSKLPIVWSRLHALPMRRTLR 113

Query: 94  FIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRL------ELEEP 147
            +          +R     +   +   +    ++      +L    +R            
Sbjct: 114 PLNTRNAALECMIRTPAGPVRVLSLHLAHIAAEERLEQIDYLLAEHRRAPSDGGPWSGVD 173

Query: 148 LIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT--------- 198
                ++       +     IW  D        +  + + +  +                
Sbjct: 174 DEPTRNWTSGEAEPENPLAAIWMGDFNMEPGSAEYRRIVGSTPYHRGAAYHSGFVDAAAV 233

Query: 199 --HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTP 256
                   ++         +K    R+DH  +       + S R D         SDH P
Sbjct: 234 AGEPVPDFHTHVKTIDGRLAK---RRLDHCFVGGMFAGRVRSIRADID----EVASDHFP 286

Query: 257 VIVSLDIPEP 266
           + V +D+  P
Sbjct: 287 LRVDIDLETP 296


>gi|187476631|ref|YP_784654.1| endonuclease/exonuclease/phosphatase family protein [Bordetella
           avium 197N]
 gi|115421217|emb|CAJ47722.1| putative endonuclease/exonuclease/phosphatase family protein
           [Bordetella avium 197N]
          Length = 286

 Score = 55.6 bits (132), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 42/291 (14%), Positives = 91/291 (31%), Gaps = 32/291 (10%)

Query: 1   MSVVTVATWNVNSIRA---RIHNLAAW---IKENNPDIICLQET----------KTEDKN 44
           MS++ V ++N++  R+   R  +L      +    PD++ LQE             + ++
Sbjct: 1   MSLIRVVSYNIHKGRSSLGRHESLNDLRLGLYGLRPDLVFLQEVQGRNETTSMLHAQHES 60

Query: 45  FPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
                  ++ Y        + +G A+LS+Y  ++ V     D    Q   + A   +   
Sbjct: 61  LAAALRLNVAYGCNAVRAATDHGNALLSRYDIVDHVNQDISDHRLEQRGLLHARIDVGGT 120

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
            +    ++L         +       I+  +   +  +   +   +              
Sbjct: 121 EVHCLVVHLGLFASSRQRQIQALTERIRAEVPDGAPLIIAGDFNDWGDKLAPQFVQQLGL 180

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH----------DTHHLYSFWDYYADS 214
             +          E+ +    L+ +         +               Y        +
Sbjct: 181 YEVFSHAPRTSGGELPRLRDSLRRLTAALRGVPGNTVVLERGNQLGMDGTY-CPLPPPRT 239

Query: 215 WSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
           +       R+D I         + SAR+    R W K SDH P++  L++P
Sbjct: 240 FPAVFPWFRLDRIY-QRGFA--VRSARVLRG-RQWAKLSDHAPLLTELELP 286


>gi|152982063|ref|YP_001354787.1| endonuclease/exonuclease/phosphatase family protein
           [Janthinobacterium sp. Marseille]
 gi|151282140|gb|ABR90550.1| endonuclease/exonuclease/phosphatase family protein
           [Janthinobacterium sp. Marseille]
          Length = 264

 Score = 55.6 bits (132), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 39/282 (13%), Positives = 80/282 (28%), Gaps = 43/282 (15%)

Query: 4   VTVATWNVN------SIRARIHNLAAWIKENNPDIICLQET----------KTED----- 42
           + + T+N++        R RIH L   I     D++ LQE              D     
Sbjct: 3   LRITTYNIHKGVSSFGSRPRIHALKQAINSMKSDVLFLQEVQGRHDLHALKHATDWPELS 62

Query: 43  -KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI 101
            ++F         Y +       ++G A+LS Y  +        D        +      
Sbjct: 63  QQDFLAGDSHECAYGMNAVYDHGHHGNALLSCYPILSSRNQNISDHKYESRGILHCVVRA 122

Query: 102 NTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161
               +    ++L         + +  I  +    +     +   +   ++ D +   +  
Sbjct: 123 PEAEVHCFVIHLGLFAGSRKRQTEALIEAVTSSAQKDEPLIIAGDFNDWSNDLSDELRAR 182

Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI 221
              + +  EN               +          T      +               +
Sbjct: 183 LGVHEVYDENLVKRGFGTYIRQLAGRGPKIQ--PARTFPAAMPF---------------L 225

Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           R+D I +       + SA +      W K SDH P++ +L +
Sbjct: 226 RLDRIYV-RGF--KVESAEVLHGAI-WAKLSDHAPLVATLRL 263


>gi|150003564|ref|YP_001298308.1| hypothetical protein BVU_0993 [Bacteroides vulgatus ATCC 8482]
 gi|149931988|gb|ABR38686.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482]
          Length = 359

 Score = 55.6 bits (132), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 45/271 (16%), Positives = 82/271 (30%), Gaps = 32/271 (11%)

Query: 4   VTVATWNV-----NSIRARIHN----LAAWIKENNPDIICLQET----KTEDKNFPFETL 50
           +   ++N      N  RA   +    +  +++ +N DIICLQE     +   K   +  L
Sbjct: 101 IKFLSYNTMAFEKN--RANTKDNPNPVLEYLRNSNADIICLQEYIVGGRLTKKEVDY-AL 157

Query: 51  QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
           +   Y          NG+   S++    I++  P     +    I     +N  TL I N
Sbjct: 158 RDYPYK-NYHKISGANGLGCYSRFP---ILSAHPVKYASLNNGSIAYKIKVNGDTLLIVN 213

Query: 111 LYLPHGN--PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168
            +L            Y + +    +       RL + +    +    +            
Sbjct: 214 NHLESNKLTEKDKEVYREMMKDPDKQKVSQGSRLLIGKLAEASAIRAVQADSIARLVAGY 273

Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
                    +   S     +    + +              Y  + +      RID+I+L
Sbjct: 274 KGGGIIVCGDFNDSPISYTHRVVGEGLNDAFVESGNGFGISYNQNHFY----FRIDNILL 329

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
           S    S      +D       K SDH P+  
Sbjct: 330 SKNLKSY--RCTVDNTI----KSSDHYPIWC 354


>gi|296086676|emb|CBI32311.3| unnamed protein product [Vitis vinifera]
          Length = 397

 Score = 55.6 bits (132), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 77/253 (30%), Gaps = 19/253 (7%)

Query: 15  RARIHNLAAWIKENNPDIICLQETKTEDKNF-----PFETLQSLNYHIETCGQKSYNGVA 69
           R+R   +   ++E + DI+ LQ+ K E++              +NY +         G A
Sbjct: 120 RSR-RTVVEVLRELDADILALQDVKAEEEKAMKPLSDLAAALGMNY-VFAESWAPEYGNA 177

Query: 70  ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKIS 129
           ILSK+           DD D +              +     +L H +     K  + I 
Sbjct: 178 ILSKWPIKRWKVQKIFDDTDFRNVLKATIDVPQAGEVNFHCTHLDHLDENWRMKQINSII 237

Query: 130 WIKRFLRFASQRLEL-EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN 188
                    +  L   +E    +  +  I + ++       + +    L+ +Q       
Sbjct: 238 QSNEGPHILAGGLNSLDETDYSSERWTDIVKYYEEMGKPTPKVEVMKFLKSKQYTDAKDF 297

Query: 189 MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGW 248
            G  +++                        G R+D+I+ SP +                
Sbjct: 298 AGECESVVMIAKGQ------SVQGTCK---YGTRVDYILASPSSPYKFVPGS--YSVFSS 346

Query: 249 TKPSDHTPVIVSL 261
              SDH  V V +
Sbjct: 347 KGTSDHHIVKVDI 359


>gi|147854417|emb|CAN78583.1| hypothetical protein VITISV_029931 [Vitis vinifera]
          Length = 1875

 Score = 55.6 bits (132), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 28/244 (11%), Positives = 66/244 (27%), Gaps = 28/244 (11%)

Query: 16  ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75
           ++   + A I+    D+ CLQETK +                         GV       
Sbjct: 750 SKRKVIKAMIRSQKVDLFCLQETKIQ---------------------LMXEGVVRSLGTG 788

Query: 76  PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135
                  L                T+    + +G   +          +    + +    
Sbjct: 789 RFLEWGALDAHGSAGGVLICWDKRTLELIEMEVGQFSISCRLRNVEDGFVWIFTGVYGPF 848

Query: 136 RFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAI 195
               +    EE     G ++        +N ++ + +      +  + ++   +     +
Sbjct: 849 SREEREAFWEELGAIRGIWSDPWCIGGDFNVVLSQRERSSQGRISGAMRRFAQVVDELEL 908

Query: 196 RATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHT 255
                   ++S+    +   +     R+D  ++S               PR     SDH 
Sbjct: 909 LDLPLQGGVFSW----SGGRNNQAWARLDRFLVSQCWLDKCCGVVQCRLPR---PISDHF 961

Query: 256 PVIV 259
           P+++
Sbjct: 962 PIML 965


>gi|108803660|ref|YP_643597.1| endonuclease/exonuclease/phosphatase [Rubrobacter xylanophilus DSM
           9941]
 gi|108764903|gb|ABG03785.1| Endonuclease/exonuclease/phosphatase [Rubrobacter xylanophilus DSM
           9941]
          Length = 265

 Score = 55.6 bits (132), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 43/271 (15%), Positives = 73/271 (26%), Gaps = 25/271 (9%)

Query: 4   VTVATWNVNS---------IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           + V T+NV            R R    A  ++   PD+I  QE            LQ  N
Sbjct: 5   LRVMTFNVRGAYHPDGRNAWRRRRSLNARVVRGAAPDLIGFQE------------LQRAN 52

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
                     Y  +             +    D D         F ++    R    +  
Sbjct: 53  LRFYERELPRYRRLPGPEYENRRPRARNAIFWDPDRLELLESGGFWLSETPERFSRSWGS 112

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
                 +      +      L   +    +       G   I  +      P++   D  
Sbjct: 113 RQVRSANWAVFRVLPSGPDLLHLNTHLDHVSAEARRRGSRLIAGRLEGVRLPVLLTGDFN 172

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
                R               RA +   +  +F  +  + +   K  RID I++     +
Sbjct: 173 CNPGSRTYEVFASAGFADAHRRAGNPPEN--TFHRFMGEGYRSGKEGRIDWILVRDGGRA 230

Query: 235 L--LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              + S R+         PSDH PV+  L +
Sbjct: 231 RWEVLSCRVVRDCEPPLYPSDHYPVVADLAL 261


>gi|163757064|ref|ZP_02164169.1| hypothetical protein KAOT1_04125 [Kordia algicida OT-1]
 gi|161322964|gb|EDP94308.1| hypothetical protein KAOT1_04125 [Kordia algicida OT-1]
          Length = 277

 Score = 55.6 bits (132), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 37/283 (13%), Positives = 76/283 (26%), Gaps = 58/283 (20%)

Query: 4   VTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQE-----TK-----TEDKN 44
           + + ++N+         NS   R   +   IK   P ++ +QE      K       D +
Sbjct: 22  LKIMSYNIKLDYPKEGKNSWMNRKPFMVNQIKFYEPTVLGVQEALPNQMKDLDSLLTDYS 81

Query: 45  FP---FETLQSLNYHIETCGQKSYNGV----AILSKYQPIEIVTHLPGDDLDVQARFIEA 97
           F     +  ++   +     +K    V           P ++          +    +  
Sbjct: 82  FVGVGRDDGKNKGEYSAIFYKKDELEVVQSSTFWLSETPEKVSMGWDAVCNRMCTYALFQ 141

Query: 98  TFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII 157
                 +       +   G        + + +     L           P+   GD+N+ 
Sbjct: 142 HTKTKQKFWVFNTHFDHVGK-------EARKNSAVLILNKIKSANTENYPVFLTGDFNME 194

Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK 217
           P      +      D+     +    +   N                          + K
Sbjct: 195 PNHESIDHITQSLKDSKKIAALDFGPEGTFNGFH-----------------------FDK 231

Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
               RID+I +S      +H   + +       PSDH PV++ 
Sbjct: 232 PVTRRIDYIFVSKHV--KVHKYAVLSDHWNMQYPSDHLPVLIE 272


>gi|156324991|ref|XP_001618531.1| hypothetical protein NEMVEDRAFT_v1g154278 [Nematostella vectensis]
 gi|156199233|gb|EDO26431.1| predicted protein [Nematostella vectensis]
          Length = 328

 Score = 55.6 bits (132), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 41/259 (15%), Positives = 79/259 (30%), Gaps = 25/259 (9%)

Query: 6   VATWNVNSIRARIHNLAAW--IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + N + +R++      +  ++ N  DII LQET   D+    + L+  N  I      
Sbjct: 4   LVSINSHGLRSQDRRATTFSSLRRNRYDIILLQETHWTDE-IQDDILREWNGDIYFSNGT 62

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +      +     +                  +       + + I          IT+  
Sbjct: 63  NSARGVAILLNPRL-------------DYNLTQTKHDTTGRVINITIELEDQTLCITNIY 109

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
                +  K+F       L  +   I  GD+N I            +       E    +
Sbjct: 110 APRTDTERKQFYLNLDPYLATKNYNIIGGDFNCITNTRLDKLGGNPDARQTANTE---LY 166

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
                   TD  R  +     ++ W     + +     RID  M++   T ++ +  I  
Sbjct: 167 TIAAKHDLTDIWRDRNPDTRGFT-WTGRHPTDNTIIRTRIDKFMVNKAMTHVITNTEIKP 225

Query: 244 KPRGWTKPSDHTPVIVSLD 262
                   SDH  + ++LD
Sbjct: 226 YA-----HSDHDSITMTLD 239


>gi|125901787|gb|ABN58714.1| pol-like protein [Biomphalaria glabrata]
          Length = 1222

 Score = 55.6 bits (132), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 38/266 (14%), Positives = 73/266 (27%), Gaps = 46/266 (17%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64
            +  WN   ++A    +   +    P  +CLQET      F  + +   +Y   T   + 
Sbjct: 4   RIVQWNCRGLKANYEEMQLLMDSETPVAVCLQET------FLKDCISFRSYRAYTKNVED 57

Query: 65  YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124
               +        + + H   +                 + +   +LYLP G P+  T  
Sbjct: 58  AERASGGVCILVKDSIPHERVELQTTLQAVAAR--ITLHKVITCCSLYLPPGAPLNRTDM 115

Query: 125 DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ 184
           +D +  + R                                     +     LE      
Sbjct: 116 EDLLKQLPRPYLILGDFNAHNTMW-----------------GSNNTDTRGRMLEDIFLQH 158

Query: 185 KLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK 244
            L  +    +    H     ++                ID  +  P        + +   
Sbjct: 159 DLCILN-DASPTYLHPGTGSFTC---------------IDLTVCVPGLLDDFKWS-VSND 201

Query: 245 PRGWTKPSDHTPVIVSLDIPEPRKKQ 270
            RG    SDH P+I++ ++P   + Q
Sbjct: 202 LRG----SDHFPIIITNNLPSLGRPQ 223


>gi|115744320|ref|XP_797963.2| PREDICTED: similar to endonuclease-reverse transcriptase
           [Strongylocentrotus purpuratus]
 gi|115930783|ref|XP_001183329.1| PREDICTED: similar to endonuclease-reverse transcriptase
           [Strongylocentrotus purpuratus]
          Length = 900

 Score = 55.6 bits (132), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 37/280 (13%), Positives = 85/280 (30%), Gaps = 19/280 (6%)

Query: 6   VATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + TWNV ++    ++  L   +++   ++I + ET                Y +    ++
Sbjct: 61  IGTWNVRTLNQDGKLDILLNQLEKFKWEVIGVSET---SHWKESGDFTEGGYKVLCASEE 117

Query: 64  S-YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
             +     L   +  +                   T T     +++    +     +  T
Sbjct: 118 DVHRRGVALILNKQAQKALLGYNTISPRLISARFQTQTGALTIIQVYAPNMADREEMIDT 177

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
            YD     I          ++ +       D++                +     E   +
Sbjct: 178 FYDQLQQTIDDTPNKDILIVQGDLNAKVGRDWDT----WKNVIGHHGYGEMNNRGEKLLN 233

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           F    N+   + +         +++     D  +KNK   ID +M++ +  S +  A   
Sbjct: 234 FCMANNLAIANTMFKQKKASREWTWES--PDGRTKNK---IDFVMVNNKWKSSVQCA--- 285

Query: 243 TKPRGWTKPSDHTPVIVSLDIPEPRKKQQDS-TSQNMKPI 281
                    SDH  VI +  +    K +Q++      +P+
Sbjct: 286 RSFPSADVASDHQLVICNFKLRFKTKPKQNAIIGGKFRPL 325


>gi|152974192|ref|YP_001373709.1| endonuclease/exonuclease/phosphatase [Bacillus cereus subsp.
           cytotoxis NVH 391-98]
 gi|152022944|gb|ABS20714.1| Endonuclease/exonuclease/phosphatase [Bacillus cytotoxicus NVH
           391-98]
          Length = 263

 Score = 55.6 bits (132), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 39/280 (13%), Positives = 77/280 (27%), Gaps = 37/280 (13%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET----KTED----------KN 44
           + V T N +S +      +I  LA  I+E N D+I LQE     K +             
Sbjct: 1   MKVLTLNCHSWQEENQLEKIKYLAKTIQEENYDVIALQEVSQSIKAQSVYGNKKKDNFGL 60

Query: 45  FPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
                L+ L     +      +    + +     I  H             + T    T+
Sbjct: 61  ILLAELKQLGLENYSMVWDFAHIGYDIYEEGSAIITKHPIIKRGSFFVSESKDTTYWKTR 120

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
            +    ++                            R ++   +    D+ +     D  
Sbjct: 121 KIVYATIFYQ-----GKNITFYSCHLGWWNDEEEPFREQVNRFMEHIDDHELSFLMGDFN 175

Query: 165 NPIIWENDAC-FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223
           N      +   + ++          M   +              WD         + +RI
Sbjct: 176 NNAHLRGEGYDYMIQNNFYDTYALAMEKDEGTTVQGKIAG----WD------ENKQNLRI 225

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           D ++ +      + S+++          SDH  V V L++
Sbjct: 226 DLVLSNKPV--KVFSSKVIFNGMNRKIISDHFGVEVQLNV 263


>gi|229148769|ref|ZP_04277019.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus m1550]
 gi|228634777|gb|EEK91356.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus m1550]
          Length = 263

 Score = 55.6 bits (132), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 35/271 (12%), Positives = 63/271 (23%), Gaps = 19/271 (7%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET--KTEDKNFP----FETLQS 52
           + + T N +S +      +I  LA  I+E   D+I LQE     + +N       +    
Sbjct: 1   MKLLTLNCHSWQEENQIEKIKYLAKVIQEEEYDVIALQEVSQSIQAENVCGNKKKDNFGL 60

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           L              +     +   ++                +  F    +        
Sbjct: 61  LLLEELKALYVKDYNITWDFSHIGYDVYEEGLAIITKHNIIKEDTFFISENEDTTYWKTR 120

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                 I     D              +     +        +         +       
Sbjct: 121 KIVSTTIAYNGKDITFYSCHLGWWNDEEESFKGQVDRLMERVDSNKLAFLMGDFNNNARL 180

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                E                           + WD           +RID I+ +   
Sbjct: 181 EGEGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWD------ENKHNLRIDLILCNQS- 233

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              +HS+++          SDH  V V LDI
Sbjct: 234 -KKVHSSKVIFNGTNRNVISDHFGVEVQLDI 263


>gi|77556470|gb|ABA99266.1| retrotransposon protein, putative, LINE subclass [Oryza sativa
           Japonica Group]
          Length = 377

 Score = 55.6 bits (132), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 2/39 (5%)

Query: 6   VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTED 42
           + +WNV  + A      +   +++ N  ++CLQETK +D
Sbjct: 267 IVSWNVRGLNAPAKREAVRNLLQQQNATLVCLQETKLQD 305


>gi|315122019|ref|YP_004062508.1| hypothetical protein CKC_01345 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495421|gb|ADR52020.1| hypothetical protein CKC_01345 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 315

 Score = 55.6 bits (132), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 40/288 (13%), Positives = 83/288 (28%), Gaps = 44/288 (15%)

Query: 4   VTVATWNVNSI--------------R--ARIHNLAAWIKENNPDIICLQE------TKTE 41
           + +A+WN+N++              R  A    L  + +  N DI+CLQE       K  
Sbjct: 39  IRIASWNINTLSEKSGMPLLKNSVVREDADYDLLRRYAERLNADIVCLQEMGSYAAIK-- 96

Query: 42  DKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI 101
            + FP +T + L  +      +     AI+++   + ++          +          
Sbjct: 97  -RVFPEDTWEIL--YSGNDSDEHTVHTAIVARKGTVHVLEKSYLSMDTNKLDSKAGKRRS 153

Query: 102 NTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161
                 +  + +     +                 +      L   + +   +  I Q  
Sbjct: 154 VEILFEVNGIKI----WLLDIHLKSFCFVDSLKDAYTLSCYTLNLQVNWLNKW--IHQKK 207

Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI 221
               P I   D    +       +L      D I          S+ + +     +    
Sbjct: 208 RSNIPFIIAGDFNRKINHFGDNDELWGKISKDTILIRVPNKKR-SWCNAHKSIRKREP-- 264

Query: 222 RIDHIMLSPEATSLLHS------ARIDTKPRG-WTKPSDHTPVIVSLD 262
            ID  ++   A   L        + I+   +    + SDH P+    +
Sbjct: 265 -IDFFVMDQNAYKYLIENSYSEVSYIEEDIKKRGYRLSDHCPITTDYN 311


>gi|325912253|ref|ZP_08174650.1| hypothetical protein HMPREF0522_0529 [Lactobacillus iners UPII
          143-D]
 gi|325475912|gb|EGC79081.1| hypothetical protein HMPREF0522_0529 [Lactobacillus iners UPII
          143-D]
          Length = 96

 Score = 55.6 bits (132), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 32/86 (37%), Gaps = 17/86 (19%)

Query: 4  VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDK-------NFP 46
          +   +WN++S+ A +            +   IKE NPD++ +QETK           +  
Sbjct: 1  MLFISWNIDSLNAALTGDSDRAHETRSVLNKIKEANPDVVAIQETKLRANGPTKKHCDIL 60

Query: 47 FETLQSLNYHIETCGQKSYNGVAILS 72
           +  +   Y   +  + +    A   
Sbjct: 61 ADIFEDYQYVWRSSQEPARKSYAGTM 86


>gi|160900882|ref|YP_001566464.1| endonuclease/exonuclease/phosphatase [Delftia acidovorans SPH-1]
 gi|160366466|gb|ABX38079.1| Endonuclease/exonuclease/phosphatase [Delftia acidovorans SPH-1]
          Length = 257

 Score = 55.6 bits (132), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 35/270 (12%), Positives = 69/270 (25%), Gaps = 36/270 (13%)

Query: 2   SVVTVATWNVN-SI-------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           S++ VAT+N++  +       R  IHNL   +++ + DI+CLQE +              
Sbjct: 16  SILRVATYNIHKGVQGMGPVRRLEIHNLGHAVEQLDADIVCLQEVR-------------- 61

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
                                          G +   +              L    +  
Sbjct: 62  ------KMNHKEAAYFERWPQVSQAEYLAPLGYEAVYRTNAYTRHGEHGNALLTRWPVVG 115

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
                I+  +++ +            +   +   L       +                 
Sbjct: 116 HQHEDISDHRFEQRGLLHVEVEVQNRRVHTIVVHLGLIPGSRVRQVSQLKRFIEREVPPG 175

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
              +           +         ++   L S   Y +          +DH+ +    T
Sbjct: 176 APVVVAGDFNDWGGQIKRMLGGFGLYEYDELPSVPTYPSRLPLAQ----LDHVYV-RGLT 230

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            L        K R W + SDH P+I    +
Sbjct: 231 PLGLHV---PKGRIWWRMSDHLPLIAEFRL 257


>gi|110798703|ref|YP_695757.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens ATCC 13124]
 gi|110673350|gb|ABG82337.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens ATCC 13124]
          Length = 262

 Score = 55.6 bits (132), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 47/276 (17%), Positives = 79/276 (28%), Gaps = 28/276 (10%)

Query: 1   MSVVTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51
           M  + V T+N+         N    R   +   IK++ PDII  QE      +   + L 
Sbjct: 1   MRNLKVMTFNLKYDFKAQDNNEWSQRCLRITKLIKDHLPDIIGTQEGLIHMLDDMDDLLD 60

Query: 52  SLNY---HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108
             ++     E  G+  +N +  L     +                  +   ++     ++
Sbjct: 61  EYSWVGEDREGNGKDEFNAIFFLKNKFEVLEWNQFWLSKTPNIKGSKDFNSSLPRICTKL 120

Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL-EEPLIFAGDYNIIPQPHDCYNPI 167
                  G  I                      L+  ++         II    +CY   
Sbjct: 121 KLKDKISGLKIDIYNTHLDHESELAREEGIKIILKEVKKNYKIYKTPYIIMGDFNCYLED 180

Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227
              N           F    +    + +   H     Y              G  ID+I+
Sbjct: 181 NIFNIIREEETNNTCFNVCYDNIKNNILGTFHYFKGGY-------------DGRIIDYIL 227

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            S E    + S  ID +      PSDH PVI  L++
Sbjct: 228 YSKECE--IKSLNIDDRKINGGYPSDHYPVICELEL 261


>gi|147843817|emb|CAN83725.1| hypothetical protein VITISV_037053 [Vitis vinifera]
          Length = 1726

 Score = 55.6 bits (132), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 40/260 (15%), Positives = 81/260 (31%), Gaps = 35/260 (13%)

Query: 5   TVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
            + +WN   + +R     +  ++   NPD++ LQETK          +            
Sbjct: 725 KILSWNTRGLGSRKKRRTVRRFLSTQNPDVVMLQETK--------REIWDRRXVSSVWKG 776

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           KS + VA+ +      I        L    +F  +   +   ++ +       G    ++
Sbjct: 777 KSLDWVALPACGASGGI------VILWDSXKFXCSEKVLGXFSVTVKLNSXEEGFFWLTS 830

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFA--GDYNIIPQPHDCYNPIIWENDACFTLEVR 180
            Y    +  ++      Q L       +   GD+N+I +  +         +     E  
Sbjct: 831 VYGPNKAVXRKDFWMELQDLHGLTSPRWCVGGDFNVIKRMSERMGDSRLTVNMRCFDEFI 890

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
                         +      +  +++ +   D   K    R+D  + S E      S  
Sbjct: 891 ----------KESGLLDPPLRNAAFTWSNMQVDPICK----RLDRFLFSSEW-DSFFSQS 935

Query: 241 IDTKPRGWTKPSDHTPVIVS 260
           I      WT  SDH+ + + 
Sbjct: 936 IQEALPRWT--SDHSLICLE 953


>gi|329965398|ref|ZP_08302322.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           fluxus YIT 12057]
 gi|328522190|gb|EGF49304.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           fluxus YIT 12057]
          Length = 361

 Score = 55.6 bits (132), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 44/271 (16%), Positives = 84/271 (30%), Gaps = 25/271 (9%)

Query: 4   VTVATWNVNSIRARI-----HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           + +AT+NV++    I       +A ++++ + DI+CLQE    ++ F  ++++    H  
Sbjct: 104 LKIATYNVHNFGDEITGYSCKEMARYMQQEHVDILCLQEF-GNNRYFTADSIRKALSHWP 162

Query: 59  TCGQKSYNG------VAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
                  +       +A+ S+Y  I           +          T   + L      
Sbjct: 163 HVLTLQEDSLRKVLPIAVFSRYPLIHERFITYPQSANCSMLCDIVAGTDTVRLLNSHLQT 222

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                     + +      +R +R A    E                 +   N       
Sbjct: 223 TSVSQKRGKWQREMASDDARREIRAAKDAAETLHGNFVKRTLQTYTVGYFAKNSPYPVIV 282

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                 +  S+      GF      T    ++Y++           K +RID+I  S E 
Sbjct: 283 CGDFNSLPSSYTYQYFSGFLKDGFRTAGNGYMYTY-------RYGKKMLRIDYIFHSNEL 335

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                   +          SDH PVI+ + I
Sbjct: 336 E------GMSYYSPTQEFCSDHNPVIMEMKI 360


>gi|145516224|ref|XP_001444006.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124411406|emb|CAK76609.1| unnamed protein product [Paramecium tetraurelia]
          Length = 347

 Score = 55.6 bits (132), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 33/269 (12%), Positives = 70/269 (26%), Gaps = 23/269 (8%)

Query: 4   VTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKT-EDKNFPFETLQSL 53
           + V T+N+         N    R   +   I++ NP+I  LQE    +  +       + 
Sbjct: 92  LKVMTFNIRYDCKEDGKNDWNHRKSVVYKLIRKINPEIFGLQEVLAHQQADLQSNLQGNY 151

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
           N+         ++       Y  ++               ++  + +      RI     
Sbjct: 152 NFIGRGRQNNFWDDEGCPIYYDMLKYNIVQAEVFWFSDTPYVAGSKSYGNGFPRICTYVK 211

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
                     +     +         +  E  +  I        P+        +     
Sbjct: 212 LLHKMSQKVFHVYNTHFDHENKLSQIKSAEQIKRHI---QQYCSPEDKIIVMGDLNSLPM 268

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
              +++  S                     +++++           G+ ID+I L     
Sbjct: 269 SDAVKILTSPIWQGFTLQNTMGVLDMPLATMHAWY-------GLKLGLHIDYIFLGNL-- 319

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
               S  I         PSDH P +V  +
Sbjct: 320 -KYKSMMIVNDLIDGQYPSDHFPKVVVYE 347


>gi|300705174|ref|YP_003746777.1| metal dependent endonuclease/phosphatase [Ralstonia solanacearum
           CFBP2957]
 gi|299072838|emb|CBJ44194.1| putative metal dependent endonuclease/phosphatase [Ralstonia
           solanacearum CFBP2957]
          Length = 248

 Score = 55.6 bits (132), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 36/276 (13%), Positives = 83/276 (30%), Gaps = 46/276 (16%)

Query: 1   MSVVTVATWNVN----SI--RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           M  + VAT+N++     I  R R+H++   +   + DI+ LQE +  +       L   +
Sbjct: 1   MLRLRVATYNIHKGVTGIARRVRVHDVRQGLHTMDADIVFLQEVQDRNDRLVAAELFDPS 60

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           Y        +         Y       +   D        +     + ++ L I +    
Sbjct: 61  Y--------TQLRYLATDVYPHTVYGRNAVYDHGHHGNAIMSRYPILLSENLDISDHRFE 112

Query: 115 HGNPITSTKY--DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD---CYNPIIW 169
               + +       ++  +       ++  + +   +     +++P         +   W
Sbjct: 113 QRGLLHAVTDLGFGEVHLLCAHFGLFARSRQRQAEALIERVRSVVPTDAPLVVAGDFNDW 172

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
            N     +       ++ +         T  +H  +               +R+D I   
Sbjct: 173 NNRLDRVICQALGATEVADKAAGARPLRTFPSHLPW---------------LRLDRIY-- 215

Query: 230 PEATSLLHSARIDTKP----RGWTKPSDHTPVIVSL 261
                 +    I+       R W + SDH P++  L
Sbjct: 216 ------VRGFDIERAHALTGRDWAQRSDHVPLLAEL 245


>gi|284029915|ref|YP_003379846.1| endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836]
 gi|283809208|gb|ADB31047.1| Endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836]
          Length = 258

 Score = 55.6 bits (132), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 41/271 (15%), Positives = 71/271 (26%), Gaps = 34/271 (12%)

Query: 4   VTVATWNVNS-----IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS-LNYHI 57
           V + TWNV        R R   + A ++   PD++ +QE  +  +    + L + L  H 
Sbjct: 10  VRLMTWNVWGRFGDRWREREDAIVAVVRSLQPDLVAVQEAWSTPETTQADVLGARLGLHA 69

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
                +              E+   L        A          T  L I         
Sbjct: 70  AFAKSRMPTD-------ADPEVELGLAVLSRWPLAAVQRHHVRGETVALHIEPAAPGPRV 122

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
              +T  D             ++ L+     +   D  ++        P   E       
Sbjct: 123 DFVTTCLD-WEEDHAEQRMAQAKVLDELVRDLTTRDGLVVLAGDLNAPPDHPEISLLTER 181

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
                  +        +                    W ++   RID+I+ +      L 
Sbjct: 182 MTDCWSGRADAGHTYSSGNPYLGHGE-----------WIEDH--RIDYILATHRDPHRLQ 228

Query: 238 SARIDTKPRG-----WTKPSDHTPVIVSLDI 263
              +D   RG        PSDH  V   + +
Sbjct: 229 --VLDAGIRGLTEDNGLPPSDHYAVFADVAL 257


>gi|56478194|ref|YP_159783.1| putative endonuclease / exonuclease / phosphatase [Aromatoleum
           aromaticum EbN1]
 gi|56314237|emb|CAI08882.1| conserved hypothetical protein, putative endonuclease / exonuclease
           / phosphatase [Aromatoleum aromaticum EbN1]
          Length = 284

 Score = 55.6 bits (132), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 38/301 (12%), Positives = 79/301 (26%), Gaps = 61/301 (20%)

Query: 4   VTVATWNV------NSIRARIHNLAAWIKEN-NPDIICLQETKTEDKNFPFETLQSLNYH 56
           + + +WN+      +  R  +    A I +  + ++ICLQE     +NFP          
Sbjct: 1   MRIVSWNIQWGRGADG-RVDLERTVAAIHDIGDAEVICLQEV---AQNFPGLE------- 49

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
               G    + VAIL+   P     +  G D+   A        +    L +G ++    
Sbjct: 50  ----GGDCEDEVAILAAAFPGHEAMYGAGIDVPDGAGGRARFGNLMLSRLEVGPVFRHLL 105

Query: 117 NPITSTKYDDKISWIKR---FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
                                  +   R+       ++                      
Sbjct: 106 PCPADPGQAAMQRCCVEAVLQAPWGPVRVLTTHLEYYSARQRAAQVAMLRALQKEVAGQV 165

Query: 174 CFTLEVRQSFQKLQNMGFTDAI-----RATHDTHHLYS------------FWD-----YY 211
                 R++                           Y+            + D     + 
Sbjct: 166 AAGPAGREASPAFAAGRRPVTAVACGDFNCEPGSGAYTLMSADIALHVPPWRDAWRVKHR 225

Query: 212 ADSWSKNKGI-------RI---DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           + +     G+       R    D+  +S +  + +    +       T  SDH P+++ L
Sbjct: 226 SRAHDPTVGLHGAEWPGRTYCCDYAWVSDDLAARVAQVEVY----AATPASDHQPLVLEL 281

Query: 262 D 262
           +
Sbjct: 282 N 282


>gi|83746623|ref|ZP_00943673.1| dioxygenase [Ralstonia solanacearum UW551]
 gi|207727912|ref|YP_002256306.1| endonuclease/exonuclease/phosphatase protein [Ralstonia
           solanacearum MolK2]
 gi|207742318|ref|YP_002258710.1| endonuclease/exonuclease/phosphatase protein [Ralstonia
           solanacearum IPO1609]
 gi|83726757|gb|EAP73885.1| dioxygenase [Ralstonia solanacearum UW551]
 gi|206591154|emb|CAQ56766.1| endonuclease/exonuclease/phosphatase protein [Ralstonia
           solanacearum MolK2]
 gi|206593706|emb|CAQ60633.1| endonuclease/exonuclease/phosphatase protein [Ralstonia
           solanacearum IPO1609]
          Length = 248

 Score = 55.6 bits (132), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 36/276 (13%), Positives = 83/276 (30%), Gaps = 46/276 (16%)

Query: 1   MSVVTVATWNVN----SI--RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           M  + VAT+N++     I  R R+H++   +   + DI+ LQE +  +       L   +
Sbjct: 1   MLRLRVATYNIHKGVTGIARRVRVHDVRQGLHTMDADIVFLQEVQDRNDRLVAAELFDPS 60

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           Y        +         Y       +   D        +     + ++ L I +    
Sbjct: 61  Y--------TQLRYLATDVYPHTVYGRNAVYDHGHHGNAIMSRYPILLSENLDISDHRFE 112

Query: 115 HGNPITSTKY--DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD---CYNPIIW 169
               + +       ++  +       ++  + +   +     +++P         +   W
Sbjct: 113 QRGLLHAVTDLGFGEVHLLCAHFGLFARSRQRQAEALIERVRSVVPTDVPLVVAGDFNDW 172

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
            N     +       ++ +         T  +H  +               +R+D I   
Sbjct: 173 NNRLDRVICQALGATEVADKAAGARPLRTFPSHLPW---------------LRLDRIY-- 215

Query: 230 PEATSLLHSARIDTKP----RGWTKPSDHTPVIVSL 261
                 +    I+       R W + SDH P++  L
Sbjct: 216 ------VRGFDIERAHALTGRDWAQRSDHVPLLAEL 245


>gi|187922295|ref|YP_001893937.1| endonuclease/exonuclease/phosphatase [Burkholderia phytofirmans
           PsJN]
 gi|187713489|gb|ACD14713.1| Endonuclease/exonuclease/phosphatase [Burkholderia phytofirmans
           PsJN]
          Length = 268

 Score = 55.6 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 37/278 (13%), Positives = 79/278 (28%), Gaps = 25/278 (8%)

Query: 1   MSVVTVATWNVNSIRARIHNLAA--------WIKENNPDIICLQETKTEDKNFPFETLQS 52
           M+ +TV T+N   + A                I +  PD+  +QE K  D N     L +
Sbjct: 1   MTTLTVLTYNT--LFAGRDGGDDRRAQAQVGLINDLRPDVFLMQEAKGFDAN-GGAWLHA 57

Query: 53  LNYHIETCGQ-----KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107
           L   I   G      ++   +AI  +     +     G +       +      +   + 
Sbjct: 58  LEQQIAMRGFLAVAPRTGQNIAIFIREPLRPLGFEADGANFHHTLATLRVAVPGSELPVT 117

Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167
             + +L    P    +    ++      R      +         +              
Sbjct: 118 FISAHLCPNGPEIRRREAAYLAVHAAPERLTLVTGDFNSASPHDSE---PEDWAALAPHH 174

Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWD--YYADSWSKNKGIRIDH 225
                A     + +S            +    D   + +     Y    ++    +R D+
Sbjct: 175 RARYVADDLQGIDRSVLAHLEAAGWVDLGQELDAAGVPTVPTAAYRDAEFAT---MRCDY 231

Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           ++ S    +   S ++          SDH PV+ + ++
Sbjct: 232 LLASSGLAAKARSYQVIRNSI-TDTASDHYPVLATFEL 268


>gi|291515221|emb|CBK64431.1| Metal-dependent hydrolase [Alistipes shahii WAL 8301]
          Length = 306

 Score = 55.6 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 35/268 (13%), Positives = 75/268 (27%), Gaps = 26/268 (9%)

Query: 4   VTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           + V ++NV         NS   R   + A   +  P ++ +QE + + K +  E      
Sbjct: 54  LRVMSFNVRYSSGDDGANSWDNRKKAVPAMFADQQPTVLGVQEARLDQKTYMDE--NCAG 111

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           Y     G+              +     L        +   +        +      +  
Sbjct: 112 YKSVGVGRTDGQNAGEFMAIYYLADAVKLEKWGTFWLSDTPDVPSVGWDASTYRTATWAL 171

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
             +  +  K+    +     +    Q    +   +       +   +         N   
Sbjct: 172 FTHYKSGRKFFYVNT----HIDHVGQVAAQKSMELIEAKIRSLNPDNQPTVLTADFNKML 227

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
            +       + + +   T  +     +      ++ +  +   N   RIDHI  S   T 
Sbjct: 228 DSPIFDGVKKFMADARTTAPVTDNKAS------FNNFGGA--TNYP-RIDHIF-SSGFTP 277

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
            L  A +D +       SDH P+   L+
Sbjct: 278 -LRFATVDQRYEKVPYISDHYPIAAVLE 304


>gi|209547425|ref|YP_002279343.1| endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209538669|gb|ACI58603.1| Endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 242

 Score = 55.6 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 40/272 (14%), Positives = 78/272 (28%), Gaps = 52/272 (19%)

Query: 4   VTVATWNVNS-IRARIH----NLAAWIKENNPDIICLQETKT---------EDKNFPFET 49
           + + T+NV+S I +        +A+ I E   DI+ LQE            +        
Sbjct: 6   IRLLTYNVHSCIGSDRKLDPGRIASVIAEAQADIVALQEVDVLRRRTGGIDQAHMIASLL 65

Query: 50  LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
               ++H      +   G AI++      +         + +          + + L + 
Sbjct: 66  EMQAHFHPALSVAEEQYGDAIITALPTGAVKAGPLPSIGEQRGAISVEILVGDRKLLVVN 125

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
                 G          +         +     +   P I  GD+N IP           
Sbjct: 126 THLGLRGRER------MRQMTTLLNAGWLRGTADEPLPTILCGDFNAIPSSATYRLAARS 179

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
             DA          Q+  N        A +                     +R+DH+ ++
Sbjct: 180 LKDA----------QRAGNARPRATFPARYPL-------------------MRLDHVFVT 210

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
            +    +  A +  + R     SDH P++  +
Sbjct: 211 DDLI--VKQATVL-ENRLARVASDHLPLLAEI 239


>gi|327191270|gb|EGE58313.1| putative phosphatase protein [Rhizobium etli CNPAF512]
          Length = 659

 Score = 55.6 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 42/302 (13%), Positives = 81/302 (26%), Gaps = 58/302 (19%)

Query: 3   VVTVATWNVN---SI--RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL---- 53
           +V  A++N+     +  R  +  +A  +     D+I LQE     + F       +    
Sbjct: 371 IVNFASYNIQYGFGLDGRYDLPRIARSL--EGADVIALQEV---TRGFSRNGFADMAADI 425

Query: 54  -----NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108
                +Y          +  A      P+  +    G+ +  +         +  ++  +
Sbjct: 426 AALFPDYFWVYGPACDLHVEAPEGVLSPVRGIRFQFGNMVLSRWPIASTRTLLLPRSRTL 485

Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFA---------------SQRLELEEPLIFAGD 153
           G +    G              +                           + E     G 
Sbjct: 486 GKINPQRGATEAVINAPGGAIRVYSVHLDHVSPDERIRQLQFLNAQINAFVREGGSLTGA 545

Query: 154 YNIIPQPHDCYNPIIWENDACFTLE--VRQSFQKLQNMGFTDAIRATHD----------T 201
                         +   D     E     +        +    R               
Sbjct: 546 AEFDLPEPPLPEDYVILGDFNMEPESPEYCALAGAAGGYYGRVARIGTPVDAFAALEAYR 605

Query: 202 HHLYSFWDYYADSWSKNKGIR--IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
              YS+ +       ++ G R  +D+  +S    S L SARIDT+ +G    SDH P+ V
Sbjct: 606 PESYSWMN------PEDHGERMHLDYCFVSCGLVSRLQSARIDTQSQG----SDHFPLWV 655

Query: 260 SL 261
            +
Sbjct: 656 EI 657


>gi|319949616|ref|ZP_08023657.1| hypothetical protein ES5_09158 [Dietzia cinnamea P4]
 gi|319436722|gb|EFV91801.1| hypothetical protein ES5_09158 [Dietzia cinnamea P4]
          Length = 319

 Score = 55.6 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 36/266 (13%), Positives = 67/266 (25%), Gaps = 30/266 (11%)

Query: 6   VATWNV------------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFP--FETLQ 51
           V TWN+            +  R R   + A +    P ++C QE     +  P   + L 
Sbjct: 40  VMTWNIRRPVPAALTRAADRWRHRAPRVRALLASERPTVLCAQEV--VAEQIPTVLDGLG 97

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
             + H+         G A    Y    +                  + +      R+   
Sbjct: 98  PGHDHVGRGRSADGGGEACPVFYDATRLELLGWEQSALSDTPHRAGSVSWGNLFPRVMVE 157

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
                                   R   +       ++ A     +              
Sbjct: 158 VHLRDRITGHELLVVNTHLDPLSARSRLRSARALLEVVAARGLPAVVTGDLNAGSSSPAV 217

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
               +        ++     ++            ++ DY      +  G RID I+ +P+
Sbjct: 218 RVLLSDGTLVDSWRVARARHSEQWG---------TYADYR---RPRRDGARIDWILTTPD 265

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPV 257
            T  +  A I+        PSDH  V
Sbjct: 266 LT--VTDAAINPLRHEGGWPSDHLAV 289


>gi|282859926|ref|ZP_06269014.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           bivia JCVIHMP010]
 gi|282587329|gb|EFB92546.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           bivia JCVIHMP010]
          Length = 384

 Score = 55.6 bits (132), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 39/267 (14%), Positives = 76/267 (28%), Gaps = 24/267 (8%)

Query: 4   VTVATWNV------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFP--FETLQSLNY 55
           + + ++NV      + +  +++ +A +I  +  DI+CLQE K E    P    TL+  +Y
Sbjct: 119 IKILSYNVYLFDTWDDVEGKLNPIADYIIRSKADIVCLQEAKIETAKKPNIMHTLRK-HY 177

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
                  K  +G   +       I++             +     +N     + N +   
Sbjct: 178 KYIDRMVKRNSGDDNMVLLSKFPILSRDSIPYSSHSNMSVAYMLDVNGTKTLLVNNHFES 237

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDY--NIIPQPHDCYNPIIWENDA 173
                  K         +     ++   +                          + +  
Sbjct: 238 YGLTEEEKTSFTEMVDGKVAVKKAKGKSVSLIDKLGKTMMRRAPQVDAVAAYVKKYLDKG 297

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG---IRIDHIMLSP 230
              +          +           D++            +S NK     RIDHI  S 
Sbjct: 298 TPVILCGDFNDTPISYSHDVINGLLTDSYAS----SGNGLGFSYNKSKMYFRIDHIFASS 353

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPV 257
           E       A++D         SDH P+
Sbjct: 354 EFEPY--GAKVDKSI----NNSDHYPI 374


>gi|315654118|ref|ZP_07907034.1| exodeoxyribonuclease [Lactobacillus iners ATCC 55195]
 gi|315488814|gb|EFU78460.1| exodeoxyribonuclease [Lactobacillus iners ATCC 55195]
          Length = 96

 Score = 55.2 bits (131), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 17/96 (17%), Positives = 34/96 (35%), Gaps = 17/96 (17%)

Query: 4  VTVATWNVNSIRARIHN----------LAAWIKENNPDIICLQETKTEDK-------NFP 46
          +   +WN++S+ A +            +   IKE NPD++ +QETK           +  
Sbjct: 1  MLFISWNIDSLNAALTGDSDRAHETRSVLNKIKEANPDVVAIQETKLRANGPTKKHCDIL 60

Query: 47 FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTH 82
           +  +   Y   +  + +    A         I+  
Sbjct: 61 ADIFEDYQYVWRSSQEPARKSYAGTMFLYKKIIIHR 96


>gi|313202112|ref|YP_004040770.1| endonuclease/exonuclease/phosphatase [Methylovorus sp. MP688]
 gi|312441428|gb|ADQ85534.1| Endonuclease/exonuclease/phosphatase [Methylovorus sp. MP688]
          Length = 250

 Score = 55.2 bits (131), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 34/268 (12%), Positives = 73/268 (27%), Gaps = 27/268 (10%)

Query: 1   MSVVTVATWNVN-SI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           +  + VAT+N++  +     R  +H+    I+    D++ LQE   +D++          
Sbjct: 2   LPTLRVATFNIHKGLTSFNARLALHDQREMIRNLQADVVFLQEV--QDEH------HGNG 53

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
              +             +         +            +     + + T  I    + 
Sbjct: 54  LRFKHWPAAGQTHFLAEACGPNYAYGKNAVYPGGHHGNAVLSRFPILQSTTHDISAHEIE 113

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
               +      +        +      L       F    + I        P++   D  
Sbjct: 114 QRGLLHCEIAIEGWPQTLHCICVHLGLLARWRFKQFGALRDYIHAVIPEDAPLVIAGD-- 171

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
           F      +  ++ +      +          SF   +          R+D I +      
Sbjct: 172 FNDWRLSAGHQVMDGLNMREVFEHAHGKPARSFPSMFPL-------FRLDRIYVRGF--- 221

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
            +HSA +   PR     SDH  +   L+
Sbjct: 222 NIHSAHVHGGPRTALT-SDHAALSAVLE 248


>gi|148908559|gb|ABR17389.1| unknown [Picea sitchensis]
          Length = 303

 Score = 55.2 bits (131), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 23/42 (54%), Gaps = 4/42 (9%)

Query: 4  VTVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTE 41
          +   +WN NS+  R+      LA +++  +PD+I +QE +  
Sbjct: 53 LKFMSWNANSLLLRLKKNRTELADFVQRLDPDVIAIQEVRIP 94


>gi|147812154|emb|CAN60035.1| hypothetical protein VITISV_015752 [Vitis vinifera]
          Length = 1762

 Score = 55.2 bits (131), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 7/38 (18%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 4   VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETK 39
           + + +WN   + ++     +  +++   PB++ +QETK
Sbjct: 819 MKIISWNTRGLGSKXKRRVVKDFLRSEKPBVVMIQETK 856


>gi|254504971|ref|ZP_05117122.1| endonuclease/exonuclease/phosphatase family [Labrenzia alexandrii
           DFL-11]
 gi|222441042|gb|EEE47721.1| endonuclease/exonuclease/phosphatase family [Labrenzia alexandrii
           DFL-11]
          Length = 361

 Score = 55.2 bits (131), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 39/275 (14%), Positives = 73/275 (26%), Gaps = 37/275 (13%)

Query: 4   VTVATWNVNSIRARIHNLA-------AWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56
           + + + N       +  L         ++KE +PDII  QET           LQ   +H
Sbjct: 113 IKIVSIN-------LEALFLGDLVLTGYLKEADPDIIVFQET--------LWNLQKWRWH 157

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                    N           ++   +      ++         +      +        
Sbjct: 158 QRGLPIGGPNTSVYPEHLLVGDLGELVIFSRFPIEDTSSLVIPGVTPPGASVHYNADREI 217

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH--DCYNPIIWENDAC 174
              +       +  +             +    +    + +          P+I   D  
Sbjct: 218 LSFSINIEGQTVDLVSVHSDSPRTARRWQNKRAYFDKMDAVIAERLESDATPLIAIGDWN 277

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
                 +  + L+      A          Y F+DY          +R   I+ SP    
Sbjct: 278 SAPWSARFQRSLEANDLATAYPDGIPQVTRY-FFDYR---------LR--WILGSPVDQV 325

Query: 235 LL-HSARIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268
            +     I     G    SDH P++V+L +PE  K
Sbjct: 326 AVSKDIGIVDVSLGPHIGSDHRPLLVTLQLPEQAK 360


>gi|119897710|ref|YP_932923.1| hypothetical protein azo1419 [Azoarcus sp. BH72]
 gi|119670123|emb|CAL94036.1| conserved hypothetical protein [Azoarcus sp. BH72]
          Length = 283

 Score = 55.2 bits (131), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 47/301 (15%), Positives = 87/301 (28%), Gaps = 63/301 (20%)

Query: 4   VTVATWNV------NSI-RARIHNLAAWIKENNP----DIICLQETKTEDKNFP------ 46
           + + +WN+      + + R     LA  I+        D+ICLQE     ++FP      
Sbjct: 1   MRIVSWNIQWGRGADGVVR-----LARTIEALRALGELDVICLQEV---AEHFPGLPGGE 52

Query: 47  --------FETLQSLNYHIET---------CGQKSYNGVAILSKYQPIEIVTH-----LP 84
                    E      Y              G ++  G  +LS+     +  H       
Sbjct: 53  AGDEPRQLAEAFP--GYEAVFGAAVDVPGAGGGRARFGNLLLSRLPLGAVFRHLLPAPPD 110

Query: 85  GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL 144
                +Q   +EA        LR+   +L + +P         +  ++  +  A+     
Sbjct: 111 PGRPSMQRVCVEAVVQAPFGDLRVMTTHLEYYSPRQRAAQVQALRTLQHDVAAAALLPPA 170

Query: 145 EEPLIFAGDYNIIPQPHDCYNPIIWE----NDACFTLEVRQSFQKLQNMGFTDAIRATHD 200
            +    A      P           E      A    +   +    ++        A H 
Sbjct: 171 GKEGNPAFAARARPAAAVLCGDFNCEPGSVEHAALCADAAVAGAAFRDCWTVLHGAAPHP 230

Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
                        +   ++    D +  S      + S +I T+    T  SDH PV++ 
Sbjct: 231 PSVG------LHGAEWPDRPYCCDFVFASEGLVPRVRSLQIVTE----TAASDHQPVLLE 280

Query: 261 L 261
           L
Sbjct: 281 L 281


>gi|116249399|ref|YP_765240.1| hypothetical protein pRL120737 [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115254049|emb|CAK12446.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 242

 Score = 55.2 bits (131), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 38/272 (13%), Positives = 74/272 (27%), Gaps = 52/272 (19%)

Query: 4   VTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQETKT---------EDKNFPFET 49
           + + T+NV+S      +     +A+ I E   DI+ LQE            +        
Sbjct: 6   IKLLTYNVHSCIGGDRKLDPGRIASVIAEAEADIVALQEVDVLRRRTGGVDQAHAIASLL 65

Query: 50  LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
               ++H      +   G AI++      +         + +          N + L + 
Sbjct: 66  KMQAHFHPALSIAEEQYGDAIITSLPTGAVKAGPLPSIGEQRGAISVEILVGNRKLLVVN 125

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
                 G          +         +     +   P I  GD+N IP           
Sbjct: 126 THLGLRGRER------IRQMTTLLNPGWLRGTADEPLPTILCGDFNAIPSSATYRLAARS 179

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
             D           Q            + +                     +R+DHI ++
Sbjct: 180 LKDV----------QLAGGAAPRATFPSRYPL-------------------MRLDHIFVT 210

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
            +    +  A +  + R     SDH P++  +
Sbjct: 211 DDLI--VKKAAVL-ENRLTRIASDHLPLLAEI 239


>gi|296198965|ref|XP_002747038.1| PREDICTED: sphingomyelin phosphodiesterase 2 [Callithrix jacchus]
          Length = 422

 Score = 55.2 bits (131), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 41/301 (13%), Positives = 89/301 (29%), Gaps = 45/301 (14%)

Query: 4   VTVATWNVNSI------RA-RIHNLAAWIKENNPDIICLQETKT-EDKNFPFETLQS-LN 54
           + +   N   I      R  R+  L  ++ + + D+  L+E  + +D  +  + L     
Sbjct: 9   LRIFNLNCWGIPYLSKHRTDRMKRLGDFLNKESFDLALLEEVWSEQDFQYLRQKLSPTYP 68

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN---- 110
                      +G+ + SK+   E+  H+   +           F+     L + +    
Sbjct: 69  AAHHFRSGIIGSGLCVFSKHPIQELTQHVYTLNGYPYMIHHGDWFSGKAVGLLVLHLRGV 128

Query: 111 -------LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                        N         +++ +    +F     +  + ++  GD N+ P+   C
Sbjct: 129 VLNAYVTHLHAEYNRRKDIYLAHRVAQVWELAQFIHHTSKKADVVLLCGDLNMHPEDLGC 188

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223
                W       LE +      +           +                    GIRI
Sbjct: 189 CLLKEWTGLRDAYLETQDFKGSEEGSTMVPKNCYVNQQEL-----------KPFPFGIRI 237

Query: 224 DHIMLSPEATSLLHSARID---------TKPRGWTKPSDHTPVIVSLDIPEPRKKQQDST 274
           D++         +    I            P   T  SDH  ++ +L + +   +Q  S+
Sbjct: 238 DYV-----LYKAVSGFYIYCKSLETTTGYDPHSGTPLSDHEALMATLCVRQSPPQQNPSS 292

Query: 275 S 275
           +
Sbjct: 293 T 293


>gi|291395719|ref|XP_002714202.1| PREDICTED: TRAF and TNF receptor-associated protein [Oryctolagus
           cuniculus]
          Length = 347

 Score = 55.2 bits (131), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 46/285 (16%), Positives = 80/285 (28%), Gaps = 59/285 (20%)

Query: 2   SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           S+ +  TWN++ +       RAR   + ++I   +PD++ LQE        P        
Sbjct: 97  SMFSCITWNIDGLDLNHLQERAR--GVCSYIALYSPDVVFLQEV------IPP------- 141

Query: 55  YHIETCGQKSYNGVAI-LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
           Y      + S   +     +     I+       L  Q         +    L +     
Sbjct: 142 YCSYIKKRASSYEIITGHEEGYFTAIMLKKSRVKLKSQEIIPFPNTKMMRNLLCVHASVS 201

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
            +   + ++  +         +      LE               Q       +I+  D 
Sbjct: 202 GNELYLMTSHLESTRGHATERMNQLKMVLE-------------KIQEAPESATVIFAGDT 248

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG------IRIDHIM 227
               +       L +             H  Y+ WD   +S   N G      +R D I 
Sbjct: 249 NLRDQEVAKCGGLPSNILDVWEFLGKPKHCQYT-WDTQMNS---NLGISATCKLRFDRIF 304

Query: 228 LSPEATSLLHSARIDT---KPRGWTK------PSDHTPVIVSLDI 263
                 +      I        G  K      PSDH  ++ +LDI
Sbjct: 305 ----FRAAAEEGHIIPRSLDLLGLEKLDCGRFPSDHWGLLCNLDI 345


>gi|296875948|ref|ZP_06900007.1| RgfB protein [Streptococcus parasanguinis ATCC 15912]
 gi|296433023|gb|EFH18811.1| RgfB protein [Streptococcus parasanguinis ATCC 15912]
          Length = 270

 Score = 55.2 bits (131), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 36/275 (13%), Positives = 76/275 (27%), Gaps = 20/275 (7%)

Query: 4   VTVATWNVNSI---RARIH--NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           +   T N +S     A+     L   I E   D+IC QE    ++    ET+++  Y+  
Sbjct: 1   MKFLTLNSHSWMEENAQQKFETLKEQILEAQYDVICFQEV---NQEMASETVETDEYYQA 57

Query: 59  ----------TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108
                              +A    +       +  G D   +   + +   +    + +
Sbjct: 58  APSAVAIHKDHFVHVLVEELAAQGLHYYWTWAYNHIGYDHLNEGVAVLSRQPLKADEILV 117

Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168
            N+  P                 K  +  +      ++   F                I+
Sbjct: 118 SNMDDPTDYHTRRVAVAHTSVDGKEIVVGSVHLSWWDKGFQFEWPRIEKYFNQVEKPFIL 177

Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
             +      +         ++   D+     +T   Y+              +RID++  
Sbjct: 178 AGDFNNPAGQEGYETILSSSLKLQDSFIEAKETKGTYTVGPGIDGWTDNQVPLRIDYVFA 237

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           SPE    +    +    +     SDH  +   L +
Sbjct: 238 SPEWE--IKRLHVIFDGQNKPLVSDHYGLEAELSL 270


>gi|229495328|ref|ZP_04389063.1| AP endonuclease domain protein [Porphyromonas endodontalis ATCC
           35406]
 gi|229317771|gb|EEN83669.1| AP endonuclease domain protein [Porphyromonas endodontalis ATCC
           35406]
          Length = 402

 Score = 55.2 bits (131), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 43/252 (17%), Positives = 73/252 (28%), Gaps = 26/252 (10%)

Query: 22  AAWIKENNPDIICLQETKTEDKNFPF-------ETLQSLNYHIETCGQKSYNGVAILSKY 74
             +IK+++ DI+CLQE      + P+       E L    Y          +    L   
Sbjct: 166 LRYIKDSHADIVCLQEAAIMRDDSPYVSAKKITEYLPEYPY--VVTRYAQGDRGTSLMLL 223

Query: 75  QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRF 134
               +               I  T  +  + L + NL+L      T           +  
Sbjct: 224 SKFPVRNTRMLPLESTFNGGIAYTLDVAGRELTVFNLHLESFRLTTEDGTRYARLAREIE 283

Query: 135 LRFASQRLELEEPLIFAGDYNII---PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191
                +++E +    F                           F         +    G 
Sbjct: 284 AVALKEQMEQKLGPAFLKRAKQADRVHVEIIHEKTPYILVCGDFNDTPISYAHQRIASGL 343

Query: 192 TDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP 251
            DA  +T      YSF      ++ +  G RIDHI+ S    S   + ++D         
Sbjct: 344 IDAYASTG-CGTGYSF------TFKR-LGFRIDHILHSRRVKSY--NCKVDKSAT----I 389

Query: 252 SDHTPVIVSLDI 263
           SDH P+   + +
Sbjct: 390 SDHKPLSCFISL 401


>gi|309812653|ref|ZP_07706397.1| endonuclease/exonuclease/phosphatase family protein [Dermacoccus
           sp. Ellin185]
 gi|308433348|gb|EFP57236.1| endonuclease/exonuclease/phosphatase family protein [Dermacoccus
           sp. Ellin185]
          Length = 226

 Score = 55.2 bits (131), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 31/266 (11%), Positives = 61/266 (22%), Gaps = 52/266 (19%)

Query: 1   MSVVTVATWNVNSI---RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57
           M+   + ++NV  +   RA    L   I+   PD++CLQE        P           
Sbjct: 1   MTT-RLMSYNVRGLKDDRAA---LLRVIRHAAPDVLCLQE-------MPRHPFSD----- 44

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
                   + +A  ++   +                        +   L           
Sbjct: 45  --------HRIAEFAESVGLVWGGGNRHRMSTAIVTAPRLDVAASGHGLYTVPRPQEPRG 96

Query: 118 --PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
                     +               +          D N+             E +   
Sbjct: 97  YAWAEVCLPGEAKWLAISTHLSLYSSMRAGHARELIADPNLPGDVPWAIAGDFNELENGP 156

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT-S 234
                ++   +      +   A                        RID +  SP  T  
Sbjct: 157 AGREFKAHGLVDAGPRINTFNAAEPHK-------------------RIDFVYASPSLTLE 197

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVS 260
            +  + ++      T  +DH P++V 
Sbjct: 198 TVDMSAVEHD---MTVATDHRPLVVD 220


>gi|254823077|ref|ZP_05228078.1| hypothetical protein MintA_24325 [Mycobacterium intracellulare ATCC
           13950]
          Length = 254

 Score = 55.2 bits (131), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 32/266 (12%), Positives = 74/266 (27%), Gaps = 23/266 (8%)

Query: 4   VTVATWNV-------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56
           + VAT+N+       + +      L   ++  +PD++ LQE   +        L +    
Sbjct: 1   MRVATFNILHGRTVGDGVDVA--RLRDCVRRLDPDVLSLQEVDCDQPRSERADLTAAAAE 58

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL-RIGNLYLPH 115
                +  +      +        T             + + + + +  + R+  + +  
Sbjct: 59  AMGAVEHRFVAAISGTPGATWMAATGREQPGTAAYGIALLSRYPVASWQVLRLPRIPMRF 118

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
              +        +    R    A  R  +    +     + +P  +      +  +   F
Sbjct: 119 PMYLPGPNRVMIVDEEPRAAVIAQLRTPMGGLTVANTHLSFVPGWNRRQLLRVIHDLRGF 178

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
                 +                       +F        + N   ++DHI+        
Sbjct: 179 PGPRLLTGDLNMTPKTVGRWSGMRALATAETFP-------ADNPNRQLDHILTDD---PR 228

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
           L    +D  P      SDH P++V L
Sbjct: 229 LRGGAVDASPM---PISDHRPLVVDL 251


>gi|319782958|ref|YP_004142434.1| endonuclease/exonuclease/phosphatase [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317168846|gb|ADV12384.1| Endonuclease/exonuclease/phosphatase [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 370

 Score = 55.2 bits (131), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 48/310 (15%), Positives = 82/310 (26%), Gaps = 77/310 (24%)

Query: 25  IKENNPDIICLQETKTEDKNFPFETLQSLNYHI--------------------------- 57
           I     DIIC+QE      N          Y                             
Sbjct: 66  IAATRADIICMQEV----DNIEALKAFEYGYLFKMVGQGYRQKYTTSGNDSRGIDVAVMM 121

Query: 58  --ETCGQKSYNGVAILSKYQPIEIVTHLPGDDL----------DVQARFIEATFTINTQT 105
             ET   +    V + S          L   +L            +   +E   T+    
Sbjct: 122 RNETAQGQPIEFVRMTSHAYVTYEQFGLHTPELEALGNQANERIFRRDCLEIDVTVGGVP 181

Query: 106 LRIGNLYLPHGNPI----------TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYN 155
           L +  ++                    +  +  +  +       +    ++     GD N
Sbjct: 182 LTLYLVHFKSMGSPRNGLDGREATMPVRIAEAQAVRRIIEERFGKDYAADKRWAICGDMN 241

Query: 156 IIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW 215
              Q        I         E       L   GF + +       + +SF  Y+    
Sbjct: 242 DYRQRVKVAGDAIDGYRFEVVDEALSCINVLTAGGFCENVVERRPEMNRWSF--YHTRGP 299

Query: 216 SKNKGIRIDHIMLSPEATSLLHSA-------------------RIDTKPR-GWTKP--SD 253
            +    ++D+I+LS    +   +A                    +D  PR GW +P  SD
Sbjct: 300 EERHLCQLDYILLSKGLAASNATAVPDIIRNGQPWRTIFPPGQEVDRFPRAGWDRPKASD 359

Query: 254 HTPVIVSLDI 263
           H PV ++LD+
Sbjct: 360 HCPVAITLDM 369


>gi|209966133|ref|YP_002299048.1| endonuclease [Rhodospirillum centenum SW]
 gi|209959599|gb|ACJ00236.1| endonuclease [Rhodospirillum centenum SW]
          Length = 287

 Score = 55.2 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/278 (13%), Positives = 70/278 (25%), Gaps = 45/278 (16%)

Query: 6   VATWNVNSI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           VATWN++S      R      A  I+  + D++ LQE                 +H    
Sbjct: 40  VATWNIHSCVGMDARFAPERTACVIRGLDADVVGLQEV---------------GWHHRGE 84

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI-GNLYLPHGNPI 119
                      +                      +     +    L +   +  P G   
Sbjct: 85  MGVDQFAFLEAATGYRALAGPTKHNRAAHYGNALLTRRPVLEVAPLDLAMPMREPRGGLC 144

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                D     +              +        +  P     +   + E        +
Sbjct: 145 AVLDLDGVEVQVIVAHLGLDPWERNAQVTRILSFLDARPPRPTVFMGDLNEWR-PKAPRL 203

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
            +  ++L +     +  A   T                   +R+D I +SP     L S 
Sbjct: 204 ARLSERLPDCAAPRSFHARLPT-------------------LRLDRIFVSPTL--HLASF 242

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQN 277
            +        + SDH PV   + +P PR   + +    
Sbjct: 243 EVVRSAM-TRRASDHLPVRALIGVP-PRDADRQAGGDR 278


>gi|110636350|ref|YP_676558.1| endonuclease/exonuclease/phosphatase [Mesorhizobium sp. BNC1]
 gi|110287334|gb|ABG65393.1| Endonuclease/exonuclease/phosphatase [Chelativorans sp. BNC1]
          Length = 265

 Score = 55.2 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 48/279 (17%), Positives = 81/279 (29%), Gaps = 65/279 (23%)

Query: 2   SVVTVATWNVNS-I----RARIHNLAAWIKENNPDIICLQET----KTED--KNFPFETL 50
           + + V TWN++  I    R  +  +   +++++PD++ LQE     K  D  + F F  L
Sbjct: 19  ATMRVMTWNIHGGIGPDGRRDLQRVVDLVRKHDPDLVALQEVGSRRKVTDAAEAFTF-LL 77

Query: 51  QSLNYHIE----TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
            +L  H              G A++ ++     V H        +   IEA        L
Sbjct: 78  STLGNHATETRLITAPDGNYGHALICRWPLRSTVCHDISYRKRERRAAIEAVAETPFGPL 137

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
            +   +L                       F  +R + +         +         N 
Sbjct: 138 HVVAAHLGLS--------------------FRERRHQAQLLADLVRSGSAPTVLMGDLND 177

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226
            +W                                    +FW  +A          +D I
Sbjct: 178 WVWSGSV--------------QTLLNRLFPGHTHFKTFPAFWPVFA----------LDRI 213

Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
              P    +L     D + R     SDH PVI  L + E
Sbjct: 214 YCRPG--GMLARQWTDPQAR---TASDHLPVIAELRMEE 247


>gi|302552172|ref|ZP_07304514.1| endonuclease/exonuclease/phosphatase [Streptomyces
           viridochromogenes DSM 40736]
 gi|302469790|gb|EFL32883.1| endonuclease/exonuclease/phosphatase [Streptomyces
           viridochromogenes DSM 40736]
          Length = 274

 Score = 55.2 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/280 (13%), Positives = 67/280 (23%), Gaps = 31/280 (11%)

Query: 4   VTVATWNVNSIR-----ARIHNLAAWIKENNPDIICLQETKTED-KNFPFETLQSLNYHI 57
           + + TWN+   R      R   +   ++E  PD++ LQE    D +N        L  H 
Sbjct: 3   MRIVTWNLW-WRFGPWQTRQKAILTALRELRPDVVGLQEVWAADGENLAEWLAGELGLHC 61

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARF--IEATFTINTQTLRIGNLYLPH 115
                 +            ++I   +      V      + A    +   L +       
Sbjct: 62  AWAPSPAPERWRRRIGDATVDIGNAVLSRWPVVDRDVLPLPAPAETDDGRLALYARLAAP 121

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP---------QPHDCYNP 166
           G+ +               +R               G     P            D    
Sbjct: 122 GHDVPFFTAHFTSVPHGSAVRCGQAAALAGFVARHRGGTPFPPVVTGDLNARPDSDEVRL 181

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226
           +     A                    A        ++         +       RID++
Sbjct: 182 LGGRGTAPAVPGQVLLDAWEYADPAAPAATWDAANPYV---------AAPHEPSARIDYV 232

Query: 227 ML---SPEATSLLHSA-RIDTKPRGWTKPSDHTPVIVSLD 262
            +    P     +    R    P     PSDH  V+  LD
Sbjct: 233 HVGPPGPGGLGRVRDVRRACDGPVDGVWPSDHAAVVADLD 272


>gi|262373464|ref|ZP_06066742.1| predicted protein [Acinetobacter junii SH205]
 gi|262311217|gb|EEY92303.1| predicted protein [Acinetobacter junii SH205]
          Length = 254

 Score = 55.2 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/259 (14%), Positives = 75/259 (28%), Gaps = 26/259 (10%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + TWN N            +KE + DI  +QE ++E+K        S   +      +
Sbjct: 21  LKILTWNCNG---AFRKKIELLKEIDADIYIIQECESEEK--------SQGTYDSWLPNR 69

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            + G                        +              ++  ++  + N  T   
Sbjct: 70  IWKGHNKNKGLGVFAKEQFKLEQLYWEDSNLELFLPLKINDDFQLLAVWTKYANSPTFQY 129

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
                 +++      + +       I  GD N   Q  D ++     +D      V Q  
Sbjct: 130 IGQLWKYLQLHNTAIATKA-----TIICGDLNSNAQ-WDVWDRWWNHSDV-----VNQLK 178

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
               +  + +            +F+        KN    ID++       S  +S     
Sbjct: 179 TMNIHSLYHELTNEEQGKEKNSTFFMNRNQ--EKNY--HIDYLFSHTSLFSGRNSHFKIF 234

Query: 244 KPRGWTKPSDHTPVIVSLD 262
               W + SDH P++  L+
Sbjct: 235 DKDEWLQYSDHLPILFDLN 253


>gi|182414371|ref|YP_001819437.1| endonuclease/exonuclease/phosphatase [Opitutus terrae PB90-1]
 gi|177841585|gb|ACB75837.1| Endonuclease/exonuclease/phosphatase [Opitutus terrae PB90-1]
          Length = 257

 Score = 55.2 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/282 (14%), Positives = 67/282 (23%), Gaps = 43/282 (15%)

Query: 1   MSVVTVATWNV-NS--------------IRARIHNLAAWIKENNPDIICLQETK---TED 42
           MS V + T+N+ +               ++A +  +A  I E  PD++ LQE        
Sbjct: 1   MSRVRLVTFNIAHGRGLAPIQGLTTPQKLKANLRKIARLIGELKPDVVALQEVDERSLWA 60

Query: 43  KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN 102
            NF       L+   E      +N  A L        +             F +      
Sbjct: 61  GNFDHLEYLRLHAGFEHAVFGIHNRRAGLLNLSYGNALLSRYPISYSETVVFGQRRVGEK 120

Query: 103 TQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD 162
                  ++       +    +        R +      L                    
Sbjct: 121 GFLFAEIDVAGRVMPLVNVHLHFSSREHRIRQIGRLLAWLRE----------KQEHSRGR 170

Query: 163 CYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR 222
              P I   D         +   L +          H T    +F            G  
Sbjct: 171 WRVPAIVCGDLNNPGTSADATAALLSHLSDYGEYVLHPTKGR-TFPSPLP-------GRL 222

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
           +D + L            I          SDH PV V   +P
Sbjct: 223 LDFVFL--PGACNASHCEIVR-----CFLSDHRPVAVDFTLP 257


>gi|254881208|ref|ZP_05253918.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|254834001|gb|EET14310.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
          Length = 359

 Score = 55.2 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 44/271 (16%), Positives = 82/271 (30%), Gaps = 32/271 (11%)

Query: 4   VTVATWNV-----NSIRARIHN----LAAWIKENNPDIICLQET----KTEDKNFPFETL 50
           +   ++N      N  RA   +    +  +++ +N DIICLQE     +   K   +  L
Sbjct: 101 IKFLSYNTMAFEKN--RANTKDNPNPVLEYLRNSNADIICLQEYIVGGRLTKKEVDY-AL 157

Query: 51  QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
           +   Y          NG+   S++    I++  P     +    I     +N  TL + N
Sbjct: 158 RDYPYK-NYHKISGANGLGCYSRFP---ILSAHPVKYASLNNGSIAYKIKVNGDTLLVVN 213

Query: 111 LYLPHGN--PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168
            +L            Y + +    +       RL + +    +    +            
Sbjct: 214 NHLESNKLTEKDKEVYREMMKDPDKQKVSQGSRLLIGKLAEASAIRAVQADSIARLVAGY 273

Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
                    +   S     +    + +              Y  + +      RID+I+L
Sbjct: 274 KGGGIIVCGDFNDSPISYTHRVVGEGLNDAFVESGNGFGISYNQNHFY----FRIDNILL 329

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
           S    S      +D       K SDH P+  
Sbjct: 330 SKNLKSY--RCTVDNTI----KSSDHYPIWC 354


>gi|300909613|ref|ZP_07127074.1| exodeoxyribonuclease [Lactobacillus reuteri SD2112]
 gi|300893478|gb|EFK86837.1| exodeoxyribonuclease [Lactobacillus reuteri SD2112]
          Length = 53

 Score = 55.2 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 23/52 (44%), Gaps = 2/52 (3%)

Query: 4  VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
          +   +W+VN +++ I H      K  + D  CLQ T+ +    P + +    
Sbjct: 1  MKFISWSVNGLKSAINHGFVEDFKRQDADFFCLQCTRLDKGEEPIQ-IPDYG 51


>gi|241166987|ref|XP_002409964.1| conserved hypothetical protein [Ixodes scapularis]
 gi|215494698|gb|EEC04339.1| conserved hypothetical protein [Ixodes scapularis]
          Length = 437

 Score = 55.2 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/271 (13%), Positives = 82/271 (30%), Gaps = 12/271 (4%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDK--NFPFETLQSLNYHIETCGQKSYNGVAILSKY 74
           R+  +A ++  ++ D + LQE  ++        +T  +L +          +GV ILSK 
Sbjct: 24  RMTAIANYLSSSDLDFVFLQEIWSQRDYKRIRSKTRNNLPHAHYFHSGVLGSGVCILSKS 83

Query: 75  QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRF 134
              +        +      +    F      L     +      +  T    + +  +  
Sbjct: 84  PIADTGMLKYNLNGYAHKFYHGDWFGGKVVGL-CKVNHRGLLINLYVTHLHAEYNRQRDI 142

Query: 135 LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDA 194
                     E                   +      D  + + +  +  +         
Sbjct: 143 YLSHRICQAFEMSQYVKLTSETCDLAIVAGDFNTEPLDPPYNIILHNTCLEDAFDSLCVG 202

Query: 195 IRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR----GWTK 250
               H  +H  S +D +        G RID++M       ++ + ++   PR        
Sbjct: 203 ATCGHPDNHYTSAYDKHTCP----TGKRIDYVMF-KVGRGVVANCKVCKNPRLKTTSGLP 257

Query: 251 PSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
            SDH PV V + + +  +++ +      + I
Sbjct: 258 LSDHEPVEVVMRVTKSSQRESEYQVSRRRSI 288


>gi|49183387|ref|YP_026639.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. Sterne]
 gi|165870723|ref|ZP_02215376.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. A0488]
 gi|167634744|ref|ZP_02393063.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. A0442]
 gi|167641246|ref|ZP_02399499.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. A0193]
 gi|170688988|ref|ZP_02880189.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. A0465]
 gi|170707115|ref|ZP_02897571.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. A0389]
 gi|177654552|ref|ZP_02936408.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. A0174]
 gi|190567531|ref|ZP_03020444.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis Tsiankovskii-I]
 gi|227813041|ref|YP_002813050.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. CDC 684]
 gi|254686762|ref|ZP_05150620.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. CNEVA-9066]
 gi|254724838|ref|ZP_05186621.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. A1055]
 gi|254739015|ref|ZP_05196717.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. Western North America USA6153]
 gi|254744602|ref|ZP_05202281.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. Kruger B]
 gi|254756141|ref|ZP_05208170.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. Vollum]
 gi|254761959|ref|ZP_05213808.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. Australia 94]
 gi|49177314|gb|AAT52690.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. Sterne]
 gi|164713557|gb|EDR19081.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. A0488]
 gi|167510754|gb|EDR86147.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. A0193]
 gi|167529818|gb|EDR92566.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. A0442]
 gi|170127893|gb|EDS96764.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. A0389]
 gi|170667089|gb|EDT17851.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. A0465]
 gi|172080664|gb|EDT65747.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. A0174]
 gi|190561318|gb|EDV15290.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis Tsiankovskii-I]
 gi|227005247|gb|ACP14990.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. CDC 684]
          Length = 263

 Score = 55.2 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/271 (12%), Positives = 62/271 (22%), Gaps = 19/271 (7%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET------KTEDKNFPFETLQS 52
           + + T N +S +      +I  LA  I+E   D+I LQE       K    N   +    
Sbjct: 1   MKLLTLNCHSWQEENQIEKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGL 60

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           L              +     +   ++                +  F    +        
Sbjct: 61  LLLEELKALHVKDYNITWDFSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTTYWKTR 120

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                 I     +              + L   +        +         +       
Sbjct: 121 KIVSATIAYNGKNITFYSCHLGWWNDEEELFKGQVNRLMERVDSNELSFLMGDFNNNARL 180

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                E                           + WD           +RID I+ +   
Sbjct: 181 QGEGYEYMMQEGLYDTYELAIEKDEGTTVQGEIAGWD------ENKHNLRIDLILCNRS- 233

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              + S+++          SDH  V V +DI
Sbjct: 234 -EKIRSSKVVFNGTNRKIISDHFGVEVQVDI 263


>gi|156551960|ref|XP_001602349.1| PREDICTED: similar to neutral Sphingomyelinase, putative [Nasonia
           vitripennis]
          Length = 404

 Score = 55.2 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 48/284 (16%), Positives = 81/284 (28%), Gaps = 31/284 (10%)

Query: 1   MS---VVTVATWNVNSI------RA-RIHNLAAWIKENNPDIICLQETKTEDK--NFPFE 48
           MS    + V T N   I      R  R++ +A  +   + DI+CLQE  + D       +
Sbjct: 1   MSEELTLNVLTLNCWGIPYVSKNRVNRMNAIADKLMSEDYDIVCLQEVWSIDDFRLIRAK 60

Query: 49  TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108
           T   L Y          +G+ I S+Y   +++ H    +  V        F      L  
Sbjct: 61  TQDKLPYSHYFFSGVVGSGICIFSRYCIGDVMFHKWTLNGYVHKIHHGDWFGGKGVGL-- 118

Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168
                       +   +  ++ +       +        +        I       + +I
Sbjct: 119 ------CRIQAQNVHINVYVAHLHAEYCRENDEYNAHRVMQAFDTAQFIRMTRGGADAVI 172

Query: 169 WENDACFTLEVRQSFQKL-----QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223
              D     +              +    DA           S+ D    +    +G RI
Sbjct: 173 LGGDLNTEPQDLAFRIICGIAELSDACSKDANSLGTSECAKNSYTDLRV-ARKIPQGKRI 231

Query: 224 DHI--MLSPEATSLLHSARIDTKPRGWTK---PSDHTPVIVSLD 262
           DHI  + S      +         R   K    SDH  V+ S  
Sbjct: 232 DHILYLGSKRYKVDVSEFSHPFPTRVPDKTFSYSDHEAVMASFK 275


>gi|48596447|emb|CAD92793.1| pol protein [Drosophila melanogaster]
          Length = 1080

 Score = 55.2 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/265 (15%), Positives = 82/265 (30%), Gaps = 36/265 (13%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           ++ +A WN   I  +I  L  +I   +  I+ + ET+ ++K+   E      Y  +    
Sbjct: 9   ILKIAFWNAGGINNKIDELKLFILNIDAHIVIVTETRLDNKSTKLELPGYFTYLAQNPVS 68

Query: 63  KSYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
               GVA +       +       + +      +       ++ + I ++Y P     + 
Sbjct: 69  SKRGGVATIVNSSIRHMALEPIEKECIQSAPIVLLPENNRRSEMIVIASVYCPPSLSWSP 128

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
             +          L FA + L  +   I  GD+N        +             E  Q
Sbjct: 129 HHF-------TDVLNFAEKTLGGQTKFILCGDWNAKH---RQWGCTRACQRGTALYEAVQ 178

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS--PEATSLLHSA 239
           +    + +    A    HDT    S                ID  +          + S+
Sbjct: 179 ADPMAEIIATGCATHFPHDTRKNPSA---------------IDFSICKGLGRLEKRISSS 223

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIP 264
                       SDH P+++ +++ 
Sbjct: 224 --------ADLSSDHLPILLEINLD 240


>gi|167463375|ref|ZP_02328464.1| hypothetical protein Plarl_12581 [Paenibacillus larvae subsp.
           larvae BRL-230010]
 gi|322382169|ref|ZP_08056092.1| hypothetical protein PL1_2483 [Paenibacillus larvae subsp. larvae
           B-3650]
 gi|321153888|gb|EFX46246.1| hypothetical protein PL1_2483 [Paenibacillus larvae subsp. larvae
           B-3650]
          Length = 247

 Score = 55.2 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/265 (16%), Positives = 88/265 (33%), Gaps = 33/265 (12%)

Query: 5   TVATWNVNSIR-----ARIHNLAAWIKENNPDIICLQETKTEDKNFPF--ETLQSLNYHI 57
            V T+N++  R       +  +A  I+++  D+I L E    DK F    E    L +  
Sbjct: 8   RVVTFNIHHGRGTDRKLNLDRIAQVIEKSQADVIALNEV---DKYFSRRSEYTDQLGWLS 64

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
           E   +   +G+   +K   +   T     +             +    L +  + L    
Sbjct: 65  E---RLKLDGIFGAAKTNKVSEETDCMIREYGNALLSRFPIVDVKNHNLSVYPIRL---- 117

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
                  +  +    ++L+     L L   +       I+ +  D ++P+I   D     
Sbjct: 118 -EGRALLEVTLLIGGQWLKLYVTHLSLTPFIQSIQADMILNKIIDDHHPMILLGDFNTWP 176

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
           + +   +    +                +F  +          +R+D+I +S      + 
Sbjct: 177 QSKLWRKVTAKLTDVSHSFRKKPCL---TFPSFRPR-------VRLDYIFISHHF--HIS 224

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLD 262
           SA + T+       SDH P+I +L 
Sbjct: 225 SAEVITE---DPAASDHLPLIATLK 246


>gi|325915043|ref|ZP_08177372.1| metal-dependent hydrolase [Xanthomonas vesicatoria ATCC 35937]
 gi|325538741|gb|EGD10408.1| metal-dependent hydrolase [Xanthomonas vesicatoria ATCC 35937]
          Length = 288

 Score = 55.2 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/274 (13%), Positives = 74/274 (27%), Gaps = 34/274 (12%)

Query: 4   VTVATWNVNSIRA------------RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51
           + V ++NV   R             R   + A I++ +PD+   QE   E   +    L 
Sbjct: 35  LRVMSFNV---RVPVDTDGDKRWQVRRDAMVALIRQTHPDVFGTQELVQEQAQYLATHLP 91

Query: 52  SLNYHIETCGQKSYNGVA-ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
           +  +  +            +    + + +V        +       +++  +   L    
Sbjct: 92  TYRWFGKGRNADGGGEHMGVFYDSRVLTVVESGDFWLSETPGTPGSSSWGTDLPRLVTWA 151

Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170
           L+   G+      ++  +    +      Q        +       +P          + 
Sbjct: 152 LFERRGDKRRFYLFNTHLPHRDQDEPAREQAAR-----LILSRIAKLPADIPVVLTGDFN 206

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230
           +D   +     +                 +T   +S               RID I+   
Sbjct: 207 SDPDKSTYPTLTAALGDARTHAPKRNGPENTFQDFSTHPTR----------RIDWILF-R 255

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
             T          +  G   PSDH PV+   D P
Sbjct: 256 GLTP--TRFTTLDERPGGILPSDHYPVLAEFDWP 287


>gi|147827603|emb|CAN64078.1| hypothetical protein VITISV_041213 [Vitis vinifera]
          Length = 1017

 Score = 55.2 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 4/46 (8%)

Query: 1   MSVVT--VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTED 42
           M V+   V +WNV           + A IK    D++CLQETK ++
Sbjct: 167 MDVMKLRVLSWNVRGANDSEKRKVIKALIKSQKVDVVCLQETKMQE 212


>gi|157125734|ref|XP_001660755.1| neutral Sphingomyelinase, putative [Aedes aegypti]
 gi|108882608|gb|EAT46833.1| neutral Sphingomyelinase, putative [Aedes aegypti]
          Length = 420

 Score = 55.2 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 49/287 (17%), Positives = 83/287 (28%), Gaps = 38/287 (13%)

Query: 1   MSV-VTVATWNVNSI------RA-RIHNLAAWIKENNPDIICLQETKT-EDKNFPFETLQ 51
           M++ ++V T N+  I      RA R+  +   +   N DI+ LQE  +  D  +  + ++
Sbjct: 1   MALELSVLTLNIWGIPYVSKDRAVRVEAIGDVLSSGNYDIVSLQEVWSDSDYQYLKKRVE 60

Query: 52  S-LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL---- 106
             L +          +G+A+LS+Y  +  + H    +  V        F      L    
Sbjct: 61  GVLPFAHYFYSGVVGSGLALLSRYPIVSALFHAWSVNGYVHRIQHGDWFGGKGVGLAKIA 120

Query: 107 -------RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159
                            +         ++       +F           I AGD N  P 
Sbjct: 121 VNDQLVNVYAAHLHAEYDRKCDDYMAHRVIQAYDTAQFIESTRGNAVMQILAGDLNTEPG 180

Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK 219
                             +   +   L             +T   Y             +
Sbjct: 181 DLAYRVLQTNAKLIDTADKKLYAAGHLGTNEIGRNSYTDPETGKKY------------PQ 228

Query: 220 GIRIDHIM--LSPEATSLLHSARI---DTKPRGWTKPSDHTPVIVSL 261
           G RID+IM  +       L   R+   D  P      SDH  V   +
Sbjct: 229 GKRIDYIMYRIGEHFEGRLLEHRLPLPDRIPGKDISYSDHEAVYAKI 275


>gi|313158155|gb|EFR57560.1| endonuclease/exonuclease/phosphatase family protein [Alistipes sp.
           HGB5]
          Length = 302

 Score = 55.2 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/284 (13%), Positives = 74/284 (26%), Gaps = 43/284 (15%)

Query: 2   SVVTVATWNVNSIRARIHNLAAW----------IKENNPDIICLQETKTEDKNFPFETLQ 51
           S + V ++N+    A     AAW          I++  PD+I +QE +     +    L 
Sbjct: 30  SELNVMSYNIRYANASDKGDAAWDARKEASVAMIRDVKPDVIGMQEPRFSQAQYLIGELT 89

Query: 52  SL-NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
              +Y++    + S +  A+  +    E++    G     +    +          R   
Sbjct: 90  EYEHYYLAPDDKDSQHRNAVWWRKDRFEML--AQGYFFLNEKDITQPIKGWGHNQFRTAL 147

Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP------QPHDCY 164
                        +        R        ++                           
Sbjct: 148 WVKLRERSTGKEFFFFNTHLAHRASPVEGGDIDQVARTESVKLIVEQMKQIAGRYAPIFV 207

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG---- 220
              +  + A             + M          +   +YS+          N G    
Sbjct: 208 TGDMNASYAAGDGRRTCLDGFFEFMWSARETAPDGEADDVYSY---------NNFGEGTP 258

Query: 221 ---IRIDHIM---LSPEATSLLHSARIDTKPRGWTKPSDHTPVI 258
                IDHI    ++P     +    I+    G    SDH P++
Sbjct: 259 RFTWNIDHIFYRKVTP-----VRFRTINNDGYGVPYISDHFPIL 297


>gi|45594385|gb|AAS68534.1| pol protein [Drosophila melanogaster]
          Length = 1080

 Score = 55.2 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/265 (15%), Positives = 82/265 (30%), Gaps = 36/265 (13%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           ++ +A WN   I  +I  L  +I   +  I+ + ET+ ++K+   E      Y  +    
Sbjct: 9   ILKIAFWNAGGINNKIDELKLFILNIDAHIVIVTETRLDNKSTKLELPGYFTYLAQNPVS 68

Query: 63  KSYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
               GVA +       +       + +      +       ++ + I ++Y P     + 
Sbjct: 69  SKRGGVATIVNSSIRHMALEPIEKECIQSAPIVLLPENNRRSEMIVIASVYCPPSLSWSP 128

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
             +          L FA + L  +   I  GD+N        +             E  Q
Sbjct: 129 HHF-------TDVLNFAEKTLGGQTKFILCGDWNAKH---RQWGCTRACQRGTALYEAVQ 178

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS--PEATSLLHSA 239
           +    + +    A    HDT    S                ID  +          + S+
Sbjct: 179 ADPMAEIIATGCATHFPHDTRKNPSA---------------IDFSICKGLGRLEKRISSS 223

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIP 264
                       SDH P+++ +++ 
Sbjct: 224 --------ADLSSDHLPILLEINLD 240


>gi|326798265|ref|YP_004316084.1| endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21]
 gi|326549029|gb|ADZ77414.1| Endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21]
          Length = 259

 Score = 55.2 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/270 (15%), Positives = 86/270 (31%), Gaps = 52/270 (19%)

Query: 4   VTVATWNVN-SIRA----RIHNLAAWIKENNPDIICLQET-----KTEDKNFPFETLQSL 53
           + + ++N++    A    ++  +AA+IKE+  DI+ LQE      ++ + + P    Q  
Sbjct: 30  LKIMSYNIHHGADANEQDQLEAMAAFIKESGADIVGLQEVDSMCRRSGNVDQPRVLAQKT 89

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
             H       +Y+G +          +     + L V      +  T       +   + 
Sbjct: 90  GMHYTYTRHFAYDGGSYGQALLSRFPIERTVNERLPVSTGATTSFLTAE----VVVPTHR 145

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
                +    Y  +   +++     S   +   P I  GD N  PQ              
Sbjct: 146 TLSIGVVHLDYRAEAGRLRQAEIIDSIIKKASHPFILTGDMNAEPQHETLA--------- 196

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
                                          +++      +  K K   ID+IML     
Sbjct: 197 -----------------VLSKQLIATQGRDAFTY----PTAPPKKK---IDYIMLDKRLK 232

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           + +  A++          SDH P++ +++I
Sbjct: 233 ASVIEAKVLP-----VLFSDHLPIVSTIEI 257


>gi|317504627|ref|ZP_07962594.1| AP endonuclease domain protein [Prevotella salivae DSM 15606]
 gi|315664248|gb|EFV03948.1| AP endonuclease domain protein [Prevotella salivae DSM 15606]
          Length = 363

 Score = 55.2 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/269 (15%), Positives = 79/269 (29%), Gaps = 27/269 (10%)

Query: 4   VTVATWNVNSIRARIHN-------LAAWIKENNPDIICLQETKTED-KNFPFETLQSLNY 55
           + V ++NV S  A           +  +IK  +PDI+C+QE  T +      + +    Y
Sbjct: 101 IKVMSYNVWSF-AGWKRYADGKFPILEYIKVQHPDILCMQEAMTNEIGQHRVDAVLDKLY 159

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
                  +       ++ Y    IV+H                  I   T+ I N +L  
Sbjct: 160 -AYKDTLRYSQTSDCIALYSRYPIVSHERISYPSKGNLSGAFEVKIGNDTVIIVNNHLET 218

Query: 116 GNPITSTKYDDKISWIKR---FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                  K + K              +    +++    +    +       Y     +  
Sbjct: 219 TGLSNEDKREFKSLVKGDLKVTAAKQTSYRLVDKLGDASAKRAVQADAVARYISNHLDKS 278

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI--RIDHIMLSP 230
                +   +            +   + +        Y+A       G+  RIDHIM + 
Sbjct: 279 MIVCGDFNDTPISYARHTIAKNLIDCYVSTGNGPGVSYHAG------GMYVRIDHIMCTK 332

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIV 259
           +        ++D         SDH P++ 
Sbjct: 333 DWQPYA--CKVDHSI----GESDHYPIVC 355


>gi|260172862|ref|ZP_05759274.1| hypothetical protein BacD2_13418 [Bacteroides sp. D2]
 gi|315921145|ref|ZP_07917385.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313695020|gb|EFS31855.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 290

 Score = 55.2 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 44/280 (15%), Positives = 81/280 (28%), Gaps = 37/280 (13%)

Query: 4   VTVATWNV-----------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52
           + VA++NV           N    R   L   I  ++ DI   QE K          L +
Sbjct: 21  LNVASYNVRNSNPNDAKAGNGWEQRCPVLTQLITFHDFDIFGAQEVKHNQLEDMLNALPA 80

Query: 53  LNY-HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
            NY  +     K+    A +   +    +       L          +      +     
Sbjct: 81  YNYIGVGRDDGKTKGEYAPIFYRKDKFKLLKSGNFWLSEDTTKPNKGWDAAYTRICTWGE 140

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
           +           ++  +  I    R  S +L + +     G         D        N
Sbjct: 141 FKDKTGKFKFWFFNLHMDHIGVVARRESAKLVISKIKEMCG--------KDPVILTGDFN 192

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
               +   +   +        +  +  + T+   + W+   ++++ N   RIDHI ++P 
Sbjct: 193 VDQTSESYQVLHESGILSDSYEVAQMRYATNGTCTGWN--PNTYTPN---RIDHIFVTPN 247

Query: 232 ATSLLHSARIDTKPRGWTK----------PSDHTPVIVSL 261
            T  +    + T                 PSDH PV   L
Sbjct: 248 FT--VEKYGVLTDTYRTKNETTGKYESHIPSDHFPVKAVL 285


>gi|182420508|ref|ZP_02643101.2| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens NCTC 8239]
 gi|182380424|gb|EDT77903.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens NCTC 8239]
          Length = 262

 Score = 55.2 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 47/276 (17%), Positives = 79/276 (28%), Gaps = 28/276 (10%)

Query: 1   MSVVTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51
           M  + V T+N+         N    R   +   IK++ PDII  QE      +   + L 
Sbjct: 1   MRNLKVMTFNLKYDFKAQDNNEWSQRCLRITKLIKDHLPDIIGTQEGLIHMLDDMDDLLD 60

Query: 52  SLNY---HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108
             ++     E  G+  +N +  L     +                  +   ++     ++
Sbjct: 61  EYSWVGEDREGNGKDEFNAIFFLKNKFEVLEWNQFWLSKTPNIKGSKDFNSSLPRICTKL 120

Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL-EEPLIFAGDYNIIPQPHDCYNPI 167
                  G  I                      L+  ++         II    +CY   
Sbjct: 121 KLKDKISGLKIDIYNTHLDHESELAREEGIKIILKEVKKNYEIYKTPYIIMGDFNCYLED 180

Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227
              N           F    +    + +   H     Y              G  ID+I+
Sbjct: 181 NLFNIIREEETNNTCFNVCYDNIKNNILGTFHYFKGGY-------------DGRIIDYIL 227

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            S E    + S  ID +      PSDH PVI  L++
Sbjct: 228 YSKEYE--IKSLNIDDRKINGGYPSDHYPVICELEL 261


>gi|29290087|gb|AAO67559.1| Pol protein [Drosophila virilis]
          Length = 1537

 Score = 55.2 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 40/282 (14%), Positives = 82/282 (29%), Gaps = 37/282 (13%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNF-PFETLQSLNYHIETC 60
           +   +A WN   +R +++ L  ++  +  DI+ L E +       P   +    YH    
Sbjct: 49  NSFKIAYWNAAGVRNKLNELEVFMNRHKIDIMMLVELRLGPSALNPGPPITINGYHTYAA 108

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +   +             + H+  + +  ++           +   I    +       
Sbjct: 109 TRPPPHHRCGGVATLVKHGIKHIALEAIVFESMQSAPVAVTLAKNETIVLAPI------- 161

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
                   S       F           I  GD+N             W  +        
Sbjct: 162 YCPPQYNWSADMFAKLFQHFEKLSGSGFILCGDWNAKH---------SWWGNQRACRRGV 212

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH-SA 239
           +  + + +    + +     TH  Y+         S+N+   ID  + S      L   +
Sbjct: 213 ELLRSIHSNKKLNILATGGATHFPYT---------SRNRPSAIDIAVYSGINNDRLQTHS 263

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
            ID +       SDH P+ + L +    +     T+  + PI
Sbjct: 264 TIDLE-------SDHLPIHIGLRV---GRFPYKQTTMRLLPI 295


>gi|182414598|ref|YP_001819664.1| endonuclease/exonuclease/phosphatase [Opitutus terrae PB90-1]
 gi|177841812|gb|ACB76064.1| Endonuclease/exonuclease/phosphatase [Opitutus terrae PB90-1]
          Length = 313

 Score = 55.2 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 5/63 (7%)

Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLL--HSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           W Y+     ++   R+DHI++SP     +  H A I     G  + SDH PV+V LD  E
Sbjct: 254 WTYHY--RRRDSYTRVDHILVSPALAPAVAQHRAWI-ADLDGVNEASDHRPVVVKLDFAE 310

Query: 266 PRK 268
              
Sbjct: 311 SSP 313


>gi|187729939|ref|YP_001853833.1| endonuclease/exonuclease/phosphatase [Vibrio tapetis]
 gi|182894498|gb|ACB99663.1| putative exported nuclease [Vibrio tapetis]
          Length = 287

 Score = 55.2 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/278 (13%), Positives = 83/278 (29%), Gaps = 38/278 (13%)

Query: 2   SVVTVATWNVNSIRARI---HNLAAWIKENNPDIICLQETKTEDKNFP---FETLQSLNY 55
           + + V ++N+  + +R+     +   I++ N DII LQE      N      +       
Sbjct: 33  NSIRVGSYNI--MASRMGSTDAIVEAIRKMNVDIIGLQEV----DNMTGRSGKNFSKEGS 86

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
           +  +  +   N + +   +               +    ++    +    ++        
Sbjct: 87  NPVSQAEYIANKLGMNYYFCKAIDHDGGEYGTAVLSKYDLKLNKRMELPNIKGAEQRAAC 146

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
              +    Y   +  +   L F +Q L  E+       ++             ++N    
Sbjct: 147 AVEVDVPNYPAPVMLVTTHLDFTTQPLRAEQVRTLQTKFSS----------WQFKNALPI 196

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            +       +        A     D    Y+   +       N   +ID+I+ S      
Sbjct: 197 IVGDLNLPPQSTEYLDLTAWFNDTDKELKYTAPSW-------NPDRKIDYILTSNAQKWD 249

Query: 236 LHSARIDTKPRGWTKP--------SDHTPVIVSLDIPE 265
           +    I  KP     P        SDH P++V + + E
Sbjct: 250 IKEVYI-PKPSDRATPESKPYASVSDHLPLLVEMKLTE 286


>gi|212275738|ref|NP_001130134.1| hypothetical protein LOC100191228 [Zea mays]
 gi|194688370|gb|ACF78269.1| unknown [Zea mays]
 gi|195625836|gb|ACG34748.1| endonuclease/Exonuclease/phosphatase family protein [Zea mays]
          Length = 391

 Score = 55.2 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/287 (14%), Positives = 77/287 (26%), Gaps = 46/287 (16%)

Query: 2   SVVTVATWNVNS-----IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56
               + T+NV       +R+R+  L   IK++ PD IC QE                 Y 
Sbjct: 116 KTFKIMTYNVWFREDLELRSRMDALGDLIKQHCPDFICFQEV------------TPYIYM 163

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
           +            +LS    I++  +                F+ +T    +    +  G
Sbjct: 164 LMQKSDWWQQYTCLLSHENAIQMPYYCMQLSKMPTKPSDCIPFSNSTMGRELCIASVRTG 223

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI-IPQPHDCYNPIIWENDACF 175
                      +           Q    E          I    P+      +  +D   
Sbjct: 224 EITKLILATTHLESPCPAPPKWDQMYSKERVAQAKQSLEILGGFPNAILCGDMNWDDKGD 283

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI--RIDHIML----- 228
                         G+TDA          +++        S N+ +  R+D  +      
Sbjct: 284 GPFP-------LQDGWTDAWVELKPGEDGWTYDTKANGMLSGNRKLQKRLDRFVCKLADF 336

Query: 229 ---SPEATSL--------LHSARIDTKPRGWT---KPSDHTPVIVSL 261
              S E                +I  + +       PSDH  +++++
Sbjct: 337 KMDSIEMIGKEAIPGVSYFKEKKIRKENQRIELPVFPSDHFGLVLTI 383


>gi|260220365|emb|CBA27833.1| hypothetical protein Csp_A04240 [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 284

 Score = 55.2 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 52/288 (18%), Positives = 91/288 (31%), Gaps = 71/288 (24%)

Query: 1   MSVVTVATWNVN----SI----RARIHNLAAWIKENNPDIICLQET-KTE---DKNFPF- 47
           M  + V T+N++     +    R  IHNL+  ++  + D++CLQE  K      ++FP  
Sbjct: 36  MKTLRVVTYNIHKGVQGLGPLRRLEIHNLSHAMELMDADVLCLQEVRKLHQREARHFPHW 95

Query: 48  ------ETLQSLNYHIETCGQ----KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA 97
                 + L    Y              +G A+LSK+  ++       D    Q   +  
Sbjct: 96  PQAPQADYLAPSGYEAIYRTNAITRHGEHGNALLSKWPVVQHQHEDMSDHRLEQRGLLHV 155

Query: 98  TFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII 157
              +  Q+L +  ++L         +      +I+R +   +  L        AGD+N +
Sbjct: 156 ELDVAGQSLHVLVVHLGLIRAGRGRQLQQLTQFIQREIPPDAPLL-------VAGDFNDL 208

Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK 217
           P                                      +                    
Sbjct: 209 PAWVARQLAPAGLKAPVTKP--------------CVTFPSRLPLVQ-------------- 240

Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRG--WTKPSDHTPVIVSLDI 263
                +DH++     T    SA   T PRG  W + SDH P+I    +
Sbjct: 241 -----LDHVLA-RGLTP--VSA---TAPRGMSWARMSDHLPLITEWQL 277


>gi|147783561|emb|CAN68445.1| hypothetical protein VITISV_031264 [Vitis vinifera]
          Length = 1922

 Score = 55.2 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/175 (13%), Positives = 46/175 (26%), Gaps = 9/175 (5%)

Query: 6   VATWNVNSIRARIHN--LAAWIKENNPDIICLQETK--TEDKNFPFETLQS--LNYHIET 59
           + +WN   + +R     +  ++   NPD++ LQETK    D+       +   L     T
Sbjct: 676 ILSWNTRGLGSRKKRRTVRRFLSTQNPDVVMLQETKREIWDRRLVSXIWKEKVLGSFSVT 735

Query: 60  CGQKSYNGVAIL---SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
               S    +            +       +L          + +      I  +    G
Sbjct: 736 VKLNSDEEESFWLTSVYGPNKAVWREDFWLELQDLHGLTFPRWCVGGDFNVIRRISEKMG 795

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
           +   +        +IK         L  E    F   +          +    E 
Sbjct: 796 DSRLTVNMRRFDEFIKGKWFENMWLLHPEFKEKFRDWWQECTVEGWEGDSWKIEG 850


>gi|257889202|ref|ZP_05668855.1| endonuclease/exonuclease/phosphatase [Enterococcus faecium
           1,141,733]
 gi|257825274|gb|EEV52188.1| endonuclease/exonuclease/phosphatase [Enterococcus faecium
           1,141,733]
          Length = 274

 Score = 55.2 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/281 (14%), Positives = 80/281 (28%), Gaps = 29/281 (10%)

Query: 4   VTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQET--KTEDKNFPFETLQSLNYH 56
           + + T N +S      R ++  +A  I     D+I LQE     + K    E L++ +  
Sbjct: 1   MKIMTLNTHSWLEEEPREKLKQIAQKICHEQYDVIALQEVNQTMDAKRLTSEQLKNFSQV 60

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
            E    +S N    L +    +  T+    ++      I            + +      
Sbjct: 61  QEQTPVRSDNFAYCLIQLLAEQGETYYWSWEMSHIGYAIYEEGNALLSKQPLISQTHLVS 120

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
                  Y  +   + +    +           +  D                       
Sbjct: 121 ETKEKEDYHTRKILVGQTSVKSQCITVASCHFSWWADEKSGFAFEWKELEASLAPLTTPL 180

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLY---------SFWDYYADSWSKNK-GIRIDHI 226
             +       +  G+    ++       Y         +  +   D W  NK G+RID+I
Sbjct: 181 YLLGDFNNPAEGSGYDLVAKSQLPIRDAYPIAQKKQAEATIEKRIDGWENNKEGLRIDYI 240

Query: 227 MLSPEATSLLHSARIDTKPR---GWTKP--SDHTPVIVSLD 262
            +            + +  R   G   P  SDH  V V+L+
Sbjct: 241 YVP-------QDCFVTSYQRIFDGENGPIVSDHYGVAVTLE 274


>gi|170764286|ref|ZP_02640401.2| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens CPE str. F4969]
 gi|170713790|gb|EDT25972.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens CPE str. F4969]
          Length = 262

 Score = 55.2 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 47/276 (17%), Positives = 79/276 (28%), Gaps = 28/276 (10%)

Query: 1   MSVVTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51
           M  + V T+N+         N    R   +   IK++ PDII  QE      +   + L 
Sbjct: 1   MRDLKVMTFNLKYDFKAQDNNEWSQRCLRITKLIKDHLPDIIGTQEGLIHMLDDMDDLLD 60

Query: 52  SLNY---HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108
             ++     E  G+  +N +  L     +                  +   ++     ++
Sbjct: 61  EYSWVGEDREGNGKDEFNAIFFLKNKFEVLEWNQFWLSKTPNIKGSKDFNSSLPRICTKL 120

Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL-EEPLIFAGDYNIIPQPHDCYNPI 167
                  G  I                      L+  ++         II    +CY   
Sbjct: 121 KLKDKISGLKIDIYNTHLDHESELAREEGIKIILKEVKKIYKIYKTPYIIMGDFNCYLED 180

Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227
              N           F    +    + +   H     Y              G  ID+I+
Sbjct: 181 NLFNIIREEETNNTCFNVCYDNIKNNILGTFHYFKGGY-------------DGRIIDYIL 227

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            S E    + S  ID +      PSDH PVI  L++
Sbjct: 228 YSKEYE--IKSLNIDDRKINGGYPSDHYPVICELEL 261


>gi|288928983|ref|ZP_06422829.1| AP endonuclease domain protein [Prevotella sp. oral taxon 317 str.
           F0108]
 gi|288329967|gb|EFC68552.1| AP endonuclease domain protein [Prevotella sp. oral taxon 317 str.
           F0108]
          Length = 362

 Score = 55.2 bits (131), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 70/252 (27%), Gaps = 33/252 (13%)

Query: 21  LAAWIKENNPDIICLQET----KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQP 76
           +  ++KE + DI+CLQE     K +             YH        Y+ +AI SKY  
Sbjct: 124 MLNYVKEKDADILCLQEANLGGKFQAT-IDSLLNSIYPYHDIKEKTTIYDRLAIYSKYP- 181

Query: 77  IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
             IV          +         +   T+ + N +        + + + K         
Sbjct: 182 --IVRSERVMYPQSEDFSQACWVAMPGDTVLVVNNHFATTGLTEAQRQEFKSMLKGDLRT 239

Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPI---------IWENDACFTLEVRQSFQKLQ 187
                L             I      C             I   D   +          +
Sbjct: 240 KQMPSLGKSLVHKLGEYAKIRAPQVQCVAQFVRKRKGQSIILCGDFNDSPISYAHRCMAK 299

Query: 188 NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRG 247
            +                    Y+ +++     +RID+IM S +   L     ++ K   
Sbjct: 300 ELTDCYVASGNGPGI------SYHRNAFY----VRIDNIMCSDDWQPL--KCVVENKV-- 345

Query: 248 WTKPSDHTPVIV 259
             K SDH P+  
Sbjct: 346 --KTSDHYPIFC 355


>gi|190338709|gb|AAI63237.1| Smpd2 protein [Danio rerio]
          Length = 420

 Score = 54.8 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/284 (15%), Positives = 74/284 (26%), Gaps = 35/284 (12%)

Query: 4   VTVATWNVNSIR-------ARIHNLAAWIKENNPDIICLQETKTEDKNF--PFETLQSLN 54
           + V + N   IR        R   +   +     DI  LQE  +E        +   S  
Sbjct: 9   LRVFSLNCWGIRFLSKLCAQRYEMIGELLGREQHDIALLQEVWSERDFLFLKRKLSCSHP 68

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN---- 110
           Y          +G+A+ SK++  + + +    +           F      L I      
Sbjct: 69  YTHYFKSGVIGSGLAVFSKHRIQDALLYQYSLNGYPYMLSHGDWFGGKAVGLVIVEVFGL 128

Query: 111 -------LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                        +         +I       +F        + +I  GD N+ PQ    
Sbjct: 129 KAHVYVTHLHAEYSRAQDGYLPHRIVQSWELQQFVRHTSHGADLVILGGDLNMHPQDLGN 188

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223
                         E  +                T     +              KGIRI
Sbjct: 189 RLLRSHTGLRDCYTETDKFDGCEDGHTLIANNHFTKKQDLI-----------PFEKGIRI 237

Query: 224 DHIML--SPEATSLLHSARIDTKPRGWTKP--SDHTPVIVSLDI 263
           D+I++  S   +    S               SDH  ++  L++
Sbjct: 238 DYILMKGSQRVSVKCESLSTTKGSVSDKPFPYSDHEALMADLNL 281


>gi|242238792|ref|YP_002986973.1| endonuclease/exonuclease/phosphatase [Dickeya dadantii Ech703]
 gi|242130849|gb|ACS85151.1| Endonuclease/exonuclease/phosphatase [Dickeya dadantii Ech703]
          Length = 287

 Score = 54.8 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/294 (14%), Positives = 78/294 (26%), Gaps = 44/294 (14%)

Query: 4   VTVATWNVN-SI----RARIHNLAAWIKENNPDIICLQET-----KTEDKNFPFETLQSL 53
           + + ++N+   +    R  +  +A  ++    DIIC+QE      ++   + P E    L
Sbjct: 1   MLIVSYNIQYGLGRDNRYDLARIADEVR--GADIICMQEVERFWQRSGMVDQPTELAALL 58

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
             +    G       +I +    +       G     +   + +      +   +    +
Sbjct: 59  KEYYWVYGANLDMDASIAAPDGRVSHRRRQFGTLTLSRWPMLSSRNFPLPKFGTLTQHSI 118

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
             G   T      +   +                +    D                 + A
Sbjct: 119 QQGVLETVIDTGTRSFRVYNTHLSHLCAQTRLPQVAALLDIFARSPEEGGAWCGGHPDPA 178

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF---------------------W---- 208
               E        + M   D           YS                      W    
Sbjct: 179 AGWTEGAMPPMPAEMMLMGDL--NCLPDSEEYSRLIGPVSPAHGRLVRHRGLMDAWVAAG 236

Query: 209 -DYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
               + S   N   RIDH +L+P   + +     DT  +G    SDH P+ V L
Sbjct: 237 QPESSGSTHPNVNGRIDHCLLTPTLGAEVRRCWADTDNQG----SDHHPLWVEL 286


>gi|315498220|ref|YP_004087024.1| endonuclease/exonuclease/phosphatase [Asticcacaulis excentricus CB
           48]
 gi|315416232|gb|ADU12873.1| Endonuclease/exonuclease/phosphatase [Asticcacaulis excentricus CB
           48]
          Length = 275

 Score = 54.8 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/274 (12%), Positives = 70/274 (25%), Gaps = 35/274 (12%)

Query: 4   VTVATWNVNSIR-----------ARIHNLAAWIKENNPDIICLQETKTE-DKNFPFETLQ 51
           + + ++N   IR            R   +AA I    PD++ +QE       +       
Sbjct: 22  LRLMSYN---IRYANPQDVPPWPERGPRMAAQIAFLAPDVLGVQEALLPMVDDLSQALGD 78

Query: 52  SLNYHI--ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
             +Y +  +   +   +      + +  ++                +A         R+ 
Sbjct: 79  YDHYGVGRDDGAKSGESTTVFWRRDRFEKVSATTQWCGQTPDTPSKDADAAFPRTITRLI 138

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
                 G              +K     A Q L              +P  H        
Sbjct: 139 LKDKRSGQVFDVRNAHFDHVGVKARENCAVQIL----------SLPPVPGAHLIVLGDFN 188

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
                   +   +           + R    T   ++ +D          G  IDHI + 
Sbjct: 189 TGMGSAPYKRFTAETSPLKDSRVASTRRFGPT-GTFNGFDIRQTD-----GEAIDHIFVD 242

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                 + S    T        SDH P++  +++
Sbjct: 243 RTLM--VKSFATLTDSYSGKVISDHFPIVADIEL 274


>gi|73541781|ref|YP_296301.1| endonuclease/exonuclease/phosphatase [Ralstonia eutropha JMP134]
 gi|72119194|gb|AAZ61457.1| Endonuclease/exonuclease/phosphatase [Ralstonia eutropha JMP134]
          Length = 284

 Score = 54.8 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 44/303 (14%), Positives = 84/303 (27%), Gaps = 62/303 (20%)

Query: 4   VTVATWNV------NSIRARIHNLAAWIKE-NNPDIICLQET-------KTEDKNFPFET 49
           + + +WN+      +  R  +    A ++   + D+ICLQE        +          
Sbjct: 1   MELISWNIQWGRGADG-RVDLSRSVATMRAMADADVICLQEVTRGFGELRGAPGADQVSE 59

Query: 50  LQSL--NYH---------IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLD-----VQAR 93
           L +L   Y            + G     G  I ++    E+  H      D     +   
Sbjct: 60  LSALLPGYRLLFAPGVDRFGSDGGPRQFGNLIATRLPVHEVFRHALPWPADPDVASMPRV 119

Query: 94  FIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFAS-------------Q 140
            IEAT    ++ LR+   +L + +        + +          +              
Sbjct: 120 AIEATLQAGSRPLRVICTHLEYYSAHQRAAQANALRDWHAEACGHALRPGRSESTPGPFT 179

Query: 141 RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHD 200
                   +  GD+N  P        +   +D   T                        
Sbjct: 180 PAVRPTEAVLCGDFNSKPDDIAYRRMLEPFDD-DTTPWRDAWMHIHPGQSHAPTCAMYDK 238

Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
                  W     +         D + ++      +    ++      TK SDH P+++S
Sbjct: 239 EQ-----WPEPPFA--------CDFVFVTENLAERVRRCEVN----AATKDSDHQPIVLS 281

Query: 261 LDI 263
           LDI
Sbjct: 282 LDI 284


>gi|33591896|ref|NP_879540.1| putative endonuclease/exonuclease/phosphatase family protein
           [Bordetella pertussis Tohama I]
 gi|33571540|emb|CAE41020.1| putative endonuclease/exonuclease/phosphatase family protein
           [Bordetella pertussis Tohama I]
          Length = 286

 Score = 54.8 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/291 (14%), Positives = 91/291 (31%), Gaps = 32/291 (10%)

Query: 1   MSVVTVATWNVNSIRA---RIHNLAAW---IKENNPDIICLQET----------KTEDKN 44
           MS++ V ++N++  R+   R  +L      +    PD++ LQE             + ++
Sbjct: 1   MSLIRVVSYNIHKGRSALGRRESLNDLRLGLYGLRPDLVFLQEVQGRNEVSSVLHAQHES 60

Query: 45  FPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
                     Y        + +G A+LS++  ++       D    Q   + A   +   
Sbjct: 61  LAAALRLQAAYGRNAIRTGTDHGNALLSRFDILDHENQDISDHRLEQRGLLHARIDVGGT 120

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP------ 158
            +    ++L         +       I++ +   +  L + +   +      +       
Sbjct: 121 EVHCFVVHLGLFAGSRGRQIQALTDRIRQSVPDGAPLLIVGDFNDWGDRLAPMFVQQLGL 180

Query: 159 QPHDCYNPIIWENDACFTLEVRQSFQKL----QNMGFTDAIRATHDTHHLYSFWDYYADS 214
                + P     D     +  +    +     N                Y        +
Sbjct: 181 YEVFSHAPRSHGGDLPRLRDSVRRLGNVLRGVPNSVAVLERNNQLGMGGAY-CPLPPPRT 239

Query: 215 WSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
           +       R+D I         + SAR+    R W + SDH+P++  L++P
Sbjct: 240 FPAVFPWFRLDRIY-QRGFA--VRSARVLRG-REWARLSDHSPLLAELELP 286


>gi|317401442|gb|EFV82074.1| hypothetical protein HMPREF0005_00913 [Achromobacter xylosoxidans
           C54]
          Length = 288

 Score = 54.8 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/306 (13%), Positives = 97/306 (31%), Gaps = 60/306 (19%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENN-------PDIICLQETK----------TEDK 43
           MS++ V ++N++  R+ +      + E         PD++ LQE +           + +
Sbjct: 1   MSLIRVVSYNIHKGRSALGR-RDSLNELRLGLYGLRPDLVFLQEVQGRNEQKSLLDAQHE 59

Query: 44  NFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
           +        + Y       ++ +G A+LS++  ++       D    Q   + AT  ++ 
Sbjct: 60  SLAAALKLDVAYGRNAIRHETDHGNALLSRFPILDHENQDISDHRLEQRGLLHATIELDG 119

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
           +++    ++L       S +       I+R +      L   +   +      +      
Sbjct: 120 RSVHCFVVHLGLFAGSRSRQILALTERIRRMVPDGEPILIAGDFNDWGDRLAPLFVQQLG 179

Query: 164 YNPIIWENDACFTLEVRQS-------------------------FQKLQNMGFTDAIRAT 198
              +          E+ +                           Q   +      +   
Sbjct: 180 LYEVFSHAPRSHGGELPRLRDSVKRLSNALRGLPNSGVSVLERTNQLGMDGSSRLLLPPP 239

Query: 199 HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVI 258
                ++ ++             R+D I         + SAR+    R W + SDH+P++
Sbjct: 240 RTFPAVFPWF-------------RLDRIY-QRGFA--VRSARVLRG-REWARLSDHSPLL 282

Query: 259 VSLDIP 264
             L++P
Sbjct: 283 AELELP 288


>gi|325955052|ref|YP_004238712.1| endonuclease/exonuclease/phosphatase [Weeksella virosa DSM 16922]
 gi|323437670|gb|ADX68134.1| Endonuclease/exonuclease/phosphatase [Weeksella virosa DSM 16922]
          Length = 343

 Score = 54.8 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/261 (16%), Positives = 85/261 (32%), Gaps = 23/261 (8%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           ++V ++N + IR        +I +N  DI+  QE    +KNF     +  +Y+ E     
Sbjct: 106 LSVMSYNAHFIR--DDGTDQFIAKNLADIMMFQE--AYEKNFKSIEKELQSYYSEH---- 157

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
              G+       PI     +     + +     A       T+R+ N+Y+       +  
Sbjct: 158 --YGLIAFFSKYPIIETKQINFPTQNNKGTAAYADIDTGKDTIRLVNIYMETMGVDKNLV 215

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
                +     +   ++++E +           + +         +       L    + 
Sbjct: 216 KSTIEAENSAQVEEKTKKIENKLIAGMLMHEKQLKEIMPYITKSPYPVLVGCDLNATPAS 275

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            + Q +                + +  +   +     IRID++  S E        +I  
Sbjct: 276 YEYQQLNAYLYDSFLQVGKGNATTF--HGFRFP----IRIDYLFHSKEFIP--IDGKIIR 327

Query: 244 KPRGWTKPSDHTPVIVSLDIP 264
           K     K SDH PVIV   +P
Sbjct: 328 K-----KFSDHYPVIVQYQLP 343


>gi|254000148|ref|YP_003052211.1| Endonuclease/exonuclease/phosphatase [Methylovorus sp. SIP3-4]
 gi|253986827|gb|ACT51684.1| Endonuclease/exonuclease/phosphatase [Methylovorus sp. SIP3-4]
          Length = 250

 Score = 54.8 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/268 (12%), Positives = 73/268 (27%), Gaps = 27/268 (10%)

Query: 1   MSVVTVATWNVN-SI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           +  + VAT+N++  +     R  +H+    I+    D++ LQE   +D++          
Sbjct: 2   LPTLRVATFNIHKGLTSFNARLALHDQREMIRNLQADVVFLQEV--QDEH------HGNG 53

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
              +             +         +            +     + + T  I    + 
Sbjct: 54  LRFKHWPAAGQTHFLADACGPNYAYGKNAVYPGGHHGNAVLSRFPILQSTTHDISAHEIE 113

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
               +      +        +      L       F    + I        P++   D  
Sbjct: 114 QRGLLHCEIAIEGWPQTLHCICVHLGLLARWRFKQFGALRDYIHAVIPEDAPLVIAGD-- 171

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
           F      +  ++ +      +          SF   +          R+D I +      
Sbjct: 172 FNDWRLSAGHQVMDGLNMREVFEHAHGKPARSFPSMFPL-------FRLDRIYVRGF--- 221

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
            +HSA +   PR     SDH  +   L+
Sbjct: 222 NIHSAHVHGGPRTALT-SDHAALSAVLE 248


>gi|74025124|ref|XP_829128.1| DNA-(apurinic or apyrimidinic site) lyase [Trypanosoma brucei
          TREU927]
 gi|70834514|gb|EAN80016.1| DNA-(apurinic or apyrimidinic site) lyase, putative [Trypanosoma
          brucei]
 gi|261335080|emb|CBH18074.1| DNA-(apurinic or apyrimidinic site) lyase,putative [Trypanosoma
          brucei gambiense DAL972]
          Length = 572

 Score = 54.8 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 7/55 (12%)

Query: 4  VTVATWNVNS-------IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51
          + + +WNV         IR+    +A +++    DI+CLQE K   +    E   
Sbjct: 1  MFLISWNVAGWGSTARLIRSDFGTIAEFLRHTQADIVCLQEVKGSWQKLKDEPYA 55



 Score = 47.9 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 17/40 (42%)

Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
               Y+ WD   +    N+G RID+I++       L   R
Sbjct: 390 CPCPYTCWDQSKNKRVVNEGNRIDYILIDASLAPKLAPCR 429


>gi|33594836|ref|NP_882479.1| putative endonuclease/exonuclease/phosphatase family protein
           [Bordetella parapertussis 12822]
 gi|33599108|ref|NP_886668.1| putative endonuclease/exonuclease/phosphatase family protein
           [Bordetella bronchiseptica RB50]
 gi|33564912|emb|CAE39857.1| putative endonuclease/exonuclease/phosphatase family protein
           [Bordetella parapertussis]
 gi|33575154|emb|CAE30617.1| putative endonuclease/exonuclease/phosphatase family protein
           [Bordetella bronchiseptica RB50]
          Length = 286

 Score = 54.8 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/291 (14%), Positives = 90/291 (30%), Gaps = 32/291 (10%)

Query: 1   MSVVTVATWNVNSIRA---RIHNLAAW---IKENNPDIICLQET----------KTEDKN 44
           MS++ V ++N++  R+   R  +L      +    PD++ LQE             + ++
Sbjct: 1   MSLIRVVSYNIHKGRSALGRRESLNDLRLGLYGLRPDLVFLQEVQGRNEVSSVLHAQHES 60

Query: 45  FPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
                     Y        + +G A+LS++  ++       D    Q   + A   +   
Sbjct: 61  LAAALRLQAAYGRNAIRTGTDHGNALLSRFDILDHENQDISDHRLEQRGLLHARIDVGGT 120

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP------ 158
            +    ++L         +       I++ +   +  L   +   +      +       
Sbjct: 121 EVHCFVVHLGLFAGSRGRQIQALTDRIRQSVPDGAPLLIAGDFNDWGDRLAPMFVQQLGL 180

Query: 159 QPHDCYNPIIWENDACFTLEVRQSFQKL----QNMGFTDAIRATHDTHHLYSFWDYYADS 214
                + P     D     +  +    +     N                Y        +
Sbjct: 181 YEVFSHAPRSHGGDLPRLRDSVRRLGNVLRGVPNSVAVLERNNQLGMGGAY-CPLPPPRT 239

Query: 215 WSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
           +       R+D I         + SAR+    R W + SDH+P++  L++P
Sbjct: 240 FPAVFPWFRLDRIY-QRGFA--VRSARVLRG-REWARLSDHSPLLAELELP 286


>gi|124266264|ref|YP_001020268.1| hypothetical protein Mpe_A1072 [Methylibium petroleiphilum PM1]
 gi|124259039|gb|ABM94033.1| conserved hypothetical protein [Methylibium petroleiphilum PM1]
          Length = 270

 Score = 54.8 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/282 (12%), Positives = 71/282 (25%), Gaps = 57/282 (20%)

Query: 4   VTVATWNVN----SI----RARIHNLAAWIKENNPDIICLQETK---------------T 40
           + VAT+N++     +    R  IHNL   I+  + D++CLQE +                
Sbjct: 19  LRVATYNIHKGVRGVGPAKRLEIHNLGLAIEALDADLVCLQEVRRFHKRDARRFDRTSFG 78

Query: 41  EDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT 100
             +    E L    Y +        N +    ++    +     G+              
Sbjct: 79  WPQQGQAEFLAPEGYDVAY----RTNAITRHGEHGNALLSRWSIGEPNHHDVSDHRFEQR 134

Query: 101 INTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP 160
                L +   +           +    S   R ++  +  +  E               
Sbjct: 135 G---LLHVQVNWQGRAVDTIVAHFGLSHSSRLRQVQRLAAFVRQELDPAVPLLVAGDFND 191

Query: 161 HDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG 220
                    +           +    +++ F            +Y+            +G
Sbjct: 192 WGERLDGAMQEAGLRRAVAPSAKGLQRSLTFPSLAPVFA-LDRVYT------------RG 238

Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
            R               S  +      W + SDH P++   +
Sbjct: 239 WR-------------CVSTFVPRGAT-WARMSDHLPLVAEFE 266


>gi|30260540|ref|NP_842917.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. Ames]
 gi|47525644|ref|YP_016993.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. 'Ames Ancestor']
 gi|229601471|ref|YP_002864988.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. A0248]
 gi|30253908|gb|AAP24403.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. Ames]
 gi|47500792|gb|AAT29468.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. 'Ames Ancestor']
 gi|229265879|gb|ACQ47516.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. A0248]
          Length = 263

 Score = 54.8 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/271 (12%), Positives = 62/271 (22%), Gaps = 19/271 (7%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET------KTEDKNFPFETLQS 52
           + + T N +S +      +I  LA  I+E   D++ LQE       K    N   +    
Sbjct: 1   MKLLTLNCHSWQEENQIEKIKYLAKVIQEEEYDVVALQEVSQSIGAKNVCGNKKEDNFGL 60

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           L              +     +   ++                +  F    +        
Sbjct: 61  LLLEELKALHVKDYNITWDFSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTTYWKTR 120

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                 I     +              + L   +        +         +       
Sbjct: 121 KIVSATIAYNGKNITFYSCHLGWWNDEEELFKGQVNRLMERVDSNELSFLMGDFNNNARL 180

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                E                           + WD           +RID I+ +   
Sbjct: 181 QGEGYEYMMQEGLYDTYELAIEKDEGTTVQGEIAGWD------ENKHNLRIDLILCNRS- 233

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              + S+++          SDH  V V +DI
Sbjct: 234 -EKIRSSKVVFNGTNRKIISDHFGVEVQVDI 263


>gi|212539053|ref|XP_002149682.1| zinc knuckle domain protein [Penicillium marneffei ATCC 18224]
 gi|210069424|gb|EEA23515.1| zinc knuckle domain protein [Penicillium marneffei ATCC 18224]
          Length = 1849

 Score = 54.8 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/252 (13%), Positives = 62/252 (24%), Gaps = 38/252 (15%)

Query: 30  PDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLD 89
            D+I +QE                 +  E                 P +           
Sbjct: 591 ADVIAIQE----------------PWRNEFTDTTHQPARTTHQLLYPKKTEHGDELPARV 634

Query: 90  VQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLI 149
                        T  +   +  +   +    T Y   I    R       R E+E+   
Sbjct: 635 CMLISKRIDPARWTHAVISRDYQIVRIDTEWRTIYIHNIYNEPRGGTVMRLREEMEKINA 694

Query: 150 FAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWD 209
              D   +       +   W           +   ++ +    + +        + ++  
Sbjct: 695 SDRDREHVILGDFNLHHPSWGGAGTQGDAEAEDLLEIMDSHDMEIVT----EPGVATW-- 748

Query: 210 YYADSWSKNKGIRIDHIMLSPEATSLLHSA----RIDTKPRGWTKPSDHTPVIVSLDIPE 265
              D  S      ID  ++S      L S      ID         SDH P+   LDI  
Sbjct: 749 ERNDQRST-----IDLTLISNGLLERLVSCVRGDDIDHD-------SDHWPIQTVLDITV 796

Query: 266 PRKKQQDSTSQN 277
           P+KK +   +  
Sbjct: 797 PQKKSEKRRNWK 808


>gi|15072501|gb|AAK77971.1| pol protein [Drosophila melanogaster]
          Length = 1080

 Score = 54.8 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/265 (15%), Positives = 81/265 (30%), Gaps = 36/265 (13%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           ++ +A WN   I  +I  L  +I   +  I+ + ET+ ++K+   E      Y  +    
Sbjct: 9   ILKIAFWNAGGINNKIDELKLFILNIDAHIVIVTETRLDNKSTKLELPGYFTYLAQNPVS 68

Query: 63  KSYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
               GVA +       +       + +      +       ++ + I ++Y P     + 
Sbjct: 69  SKRGGVATIVNSSIRHMALEPIEKECIQSAPIVLLPENNRRSEMIVIASVYCPPSLSWSP 128

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
             +          L FA + L  +   I  GD+N        +             E  Q
Sbjct: 129 HHF-------TDVLNFAEKTLGGQTKFILCGDWNAKH---RQWGCTRACQRGTALYEAVQ 178

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS--PEATSLLHSA 239
           +    + +    A    HDT    S                ID  +          + S 
Sbjct: 179 ADPMAEIIATGCATHFPHDTRKNPSA---------------IDFSICKGLGRLEKRISSV 223

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIP 264
                       SDH P+++ +++ 
Sbjct: 224 --------ADLSSDHLPILLEINLD 240


>gi|65317801|ref|ZP_00390760.1| COG3568: Metal-dependent hydrolase [Bacillus anthracis str. A2012]
          Length = 263

 Score = 54.8 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/271 (12%), Positives = 62/271 (22%), Gaps = 19/271 (7%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET------KTEDKNFPFETLQS 52
           + + T N +S +      +I  LA  I+E   D++ LQE       K    N   +    
Sbjct: 1   MKLLTLNCHSWQEENQIEKIKYLAKVIQEEEYDVVALQEVSQSIGAKNVCGNKKEDNFGL 60

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           L              +     +   ++                +  F    +        
Sbjct: 61  LLLEELKALHVKDYNITWDFSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTTYWKTR 120

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                 I     +              + L   +        +         +       
Sbjct: 121 KIVSATIAYNGKNITFYSCHLGWWNDEEELFKGQVNRLMERVDSNELSFLMGDFNNNARL 180

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                E                           + WD           +RID I+ +   
Sbjct: 181 QGEGYEYMMQEGLYDTYELAIEKDEGTTVQGEIAGWD------ENKHNLRIDLILCNRS- 233

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              + S+++          SDH  V V +DI
Sbjct: 234 -EKIRSSKVVFNGTNRKIISDHFGVEVXVDI 263


>gi|225463729|ref|XP_002264272.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 832

 Score = 54.8 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 8/38 (21%), Positives = 20/38 (52%), Gaps = 2/38 (5%)

Query: 4  VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETK 39
          + + +WN   + ++     +  +++   PD++  QETK
Sbjct: 1  MKIISWNTRGLGSKKKRRVVKDFLRSEKPDVVMFQETK 38


>gi|315446142|ref|YP_004079021.1| exonuclease III [Mycobacterium sp. Spyr1]
 gi|315264445|gb|ADU01187.1| exonuclease III [Mycobacterium sp. Spyr1]
          Length = 233

 Score = 54.8 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/258 (14%), Positives = 78/258 (30%), Gaps = 35/258 (13%)

Query: 5   TVATWNVN--SIRARIHNLAAWIKENNPDIICLQETKTED-KNFPFETLQSLNYHIETCG 61
            +AT N+     ++    LA  +   + DI+ + E +         + L  + Y      
Sbjct: 4   RIATLNIRHGGTKSA-EALAGRLLGYDADILVVTEFRANAVGERLIDRLAQVGYDTSHPD 62

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
                   +++    I+               F E+    +     I   Y+       +
Sbjct: 63  VGVKENTVLIAARGGID-----------RSWAFTESLDRRHLWCTEIDGAYVCGVYMPQN 111

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
           T        +   +R +   L + +      D +  P+                  E   
Sbjct: 112 TAKLPYWEALIDDVRPSGIDLLIGDFNTGNNDLDKAPR-----------GAKFIGPE--- 157

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
              +L   G+TD  R+ H     YS++         + G R+D++    +    +     
Sbjct: 158 MPGRLIASGYTDMWRSLHPDVREYSWFS-----RPGDNGFRLDYVFAGSDLAQRIRFCEF 212

Query: 242 DTKPRGWTKPSDHTPVIV 259
           D  PR   +  DH+ ++ 
Sbjct: 213 DHAPRTSGET-DHSGLVA 229


>gi|156402949|ref|XP_001639852.1| predicted protein [Nematostella vectensis]
 gi|156226983|gb|EDO47789.1| predicted protein [Nematostella vectensis]
          Length = 419

 Score = 54.8 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 45/285 (15%), Positives = 88/285 (30%), Gaps = 39/285 (13%)

Query: 4   VTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQET--KTEDKNFPFETLQSLN 54
           + V T N   I       + R  ++A  +     D++ LQE   K++      +   +L 
Sbjct: 14  LRVLTLNCWGIPFISKQVKERFEHIAKELSTGKYDVVALQEVWNKSDYAVMCDKLSSTLP 73

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVT------------HLPGDDLDVQARFIEATFTIN 102
           Y +        +G+ + S+Y+     T                      A +      I 
Sbjct: 74  YSLYFYSGVIGSGMCVFSRYRITNSFTYRFSLNGYLYKLWHGDWLAGTSAGYCVIDHPIK 133

Query: 103 TQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD 162
                + +L+  + N         +++   +F +      +  + +I  GD N  P    
Sbjct: 134 PIHFFVSHLHAEY-NRQDDEYLAHRVTQAYQFAQLIELITKPSDCVIVCGDMNSEPTDLC 192

Query: 163 CYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR 222
                         LE        +     +    +H++    +F    A     + GIR
Sbjct: 193 YRILCNLPGLTDTWLE------CNKEGYHGNTYGVSHNSFAGSTF--QQAIQKGPSDGIR 244

Query: 223 IDHIMLSPE------ATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           ID+I    +          +  +RI   P      SDH  V+ + 
Sbjct: 245 IDYIFYRGDRSNMELLDCHVTMSRI---PWEEISYSDHEGVLATF 286


>gi|307566177|ref|ZP_07628632.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           amnii CRIS 21A-A]
 gi|307345142|gb|EFN90524.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           amnii CRIS 21A-A]
          Length = 365

 Score = 54.8 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/285 (12%), Positives = 77/285 (27%), Gaps = 55/285 (19%)

Query: 3   VVTVATWNV------NSIRARIHNLAAWIKENNPDIICLQET-----KTEDKNFPFETLQ 51
            + + ++NV      + +  +I+ +  +I  +  DI+CLQE      K           +
Sbjct: 100 TIKILSYNVFLFDTWDDVSGQINPIVKYIVRSKADIVCLQEATLYTPKA--AKIMRYLKK 157

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
           S  Y      +   + + +LSK+  +           ++   +        T  +     
Sbjct: 158 SYPYIDNIKKKTGTDDLMLLSKFPILHREIIPYPSKSNMSVAYYININGTKTLLVNNHFE 217

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
                +   +   +     +    R       +++                 +     + 
Sbjct: 218 SYGLSSNDKADFNNIIKGNVIGRDRINKFVSLVDKIGNTMARRAPQADAVATFVKKHLDK 277

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFW--------DYYADSWSKNKGI-- 221
           +                          +D    YS++         Y +       G   
Sbjct: 278 NIP-----------------VILCGDFNDNPISYSYYTISKVLNDSYKSSG--NGIGWTY 318

Query: 222 -------RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
                  RIDHI  S E       A++D       K SDH P+  
Sbjct: 319 NENRMYFRIDHIFASNEFEPY--GAKVDKSI----KNSDHYPIYC 357


>gi|308044361|ref|NP_001183664.1| hypothetical protein LOC100502258 [Zea mays]
 gi|238013760|gb|ACR37915.1| unknown [Zea mays]
          Length = 369

 Score = 54.8 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 44/289 (15%), Positives = 88/289 (30%), Gaps = 48/289 (16%)

Query: 2   SVVTVATWNVNS------IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55
             V + T+NV        IR R++ +   I+ ++PD+IC QE      N  +   +  ++
Sbjct: 82  KTVKIMTYNVWFREELELIR-RMNAIGDLIQHHSPDLICFQEI---TPNI-YLLFEKSDW 136

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
                    +      S         +           F    F  +     +    +  
Sbjct: 137 WQAYKCSLPHKMAMERS--------YYCMQMSRLPVKSFDRKPFLNSKMGRELCVADVTV 188

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
           G  I        +           Q    E     +     +      +   I   D  +
Sbjct: 189 GGSIELVLATSHLESPCPGPPTWDQMFSKERVAQASESLKTL----GAFRNAILCGDMNW 244

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW-SKNKGI--RIDHI------ 226
             E    F   +N G+ DA          +++ D  A++  + N+ +  R+D        
Sbjct: 245 DDEGDGPFPLPENGGWVDAWAELKPGEDGWTY-DTKANAMLTGNRKLQKRLDRFVCKLPD 303

Query: 227 -------MLSPEATSLLHSARIDTKPRGWTK-------PSDHTPVIVSL 261
                  M+  EA   +   + + K R   +       PSDH  +++++
Sbjct: 304 FKVESVEMVGEEAIPRVTYVK-EKKARREIRQLVLPVLPSDHFGLVLTI 351


>gi|224539371|ref|ZP_03679910.1| hypothetical protein BACCELL_04276 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224519006|gb|EEF88111.1| hypothetical protein BACCELL_04276 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 370

 Score = 54.8 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/272 (15%), Positives = 92/272 (33%), Gaps = 26/272 (9%)

Query: 4   VTVATWNV-N--------SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ--- 51
           + +AT+NV N        S       +A ++KE   D++C QE   ++K FP ++++   
Sbjct: 111 LKIATYNVGNFGGEITGYS----CKEIARYMKEQEVDVLCFQEC-GDNKYFPMDSIRNVF 165

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
           S   +     + S  GV  ++ +    +V              ++    +   T+R+ N 
Sbjct: 166 SYWRYALIPTEDSIRGVLPIAVFSRYPLVNPQFISYQQSANCSMQCDIVLGRDTVRLLNN 225

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
           +L   +   + +  ++        R  ++ ++     +         Q       ++   
Sbjct: 226 HLQTTSVSQNRRKWERGLANSNDTRREAEVVQGAITSLHNNFVKRAEQTDSIRQLVV--- 282

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
            + + +     F  L +      +          S   Y        + +RID+I  SP 
Sbjct: 283 ASPYPVLACGDFNSLPSSYTYAELSDVLKDGFRTSGRGYMYTYRYFKRLLRIDYIFHSPG 342

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                               SDH PV++ + I
Sbjct: 343 IQ------GYRYYSPDLDLCSDHNPVLMEMKI 368


>gi|257870600|ref|ZP_05650253.1| endonuclease/exonuclease/phosphatase [Enterococcus gallinarum EG2]
 gi|257804764|gb|EEV33586.1| endonuclease/exonuclease/phosphatase [Enterococcus gallinarum EG2]
          Length = 255

 Score = 54.8 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 40/275 (14%), Positives = 76/275 (27%), Gaps = 34/275 (12%)

Query: 4   VTVATWNVNSIRA------------RIHNLAAWIKENNPDIICLQETK-TEDKNFPFETL 50
           + VAT+N   +R             R   + A I  ++ DI+C+QE + T+  +    T 
Sbjct: 1   MKVATYN---LRVDTDYDKEWQWSYRADKVLALIDYHDWDILCVQEVRPTQVADLARLT- 56

Query: 51  QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
              +Y   T  +        +  Y    + + +      +       +     + LR+  
Sbjct: 57  ---DYESVTAERDGDGTGEGIGIYYKKTMFSKVDSGSFWLSLTPDVPSIHPEAEYLRLCL 113

Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170
                   +   +       I   L   S+    E   +                     
Sbjct: 114 W------TVLRDRKGHDFLVIDTHLDNISEIARFEGMKVILERLADKIAALPVLLMGDLN 167

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230
            +A   +        +      +     +     Y  +DY       N+   ID+I  + 
Sbjct: 168 AEAVERVHESLQTIFVNAKEQNEK--GHYGPRGSYQNFDYQL---PWNQLEEIDYIY-TK 221

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
                +      T       PSDH P+   L   E
Sbjct: 222 GF--RIIKTGCLTDSCDGRFPSDHFPLEADLRFDE 254


>gi|147855242|emb|CAN79138.1| hypothetical protein VITISV_034815 [Vitis vinifera]
          Length = 1596

 Score = 54.8 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/258 (10%), Positives = 68/258 (26%), Gaps = 55/258 (21%)

Query: 4   VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + +WNV      ++   + A I+    D+ CLQETK +                    
Sbjct: 505 LRLLSWNVRGANDSSKRKVIKAMIRSQRVDLFCLQETKIQ-------------------- 544

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
             S     + S      +     G                                    
Sbjct: 545 --SMAEGVVRSLGTGRFLEWGASGCSWLCGWLRNVED----------------------- 579

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
             +    + +        +    EE     G ++        +N ++ + +      +  
Sbjct: 580 -GFVWTFTGVYGPFSREDREAFWEELGAIRGIWSDPWCIGGDFNVVLSQRERSSQGRISG 638

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           + ++   +     +        + S+    +   +     R+D  +++           I
Sbjct: 639 AMRRFAQVVDDLELLDLPLQGGVVSW----SGGRNNQAWARLDRFLVTQCWLDKF--CGI 692

Query: 242 DTKPRGWTKPSDHTPVIV 259
             + R     SDH P+++
Sbjct: 693 V-QCRLSRPTSDHFPIML 709


>gi|126310825|ref|XP_001378942.1| PREDICTED: similar to sphingomyelin phosphodiesterase 2, neutral
           membrane (neutral sphingomyelinase) [Monodelphis
           domestica]
          Length = 614

 Score = 54.8 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/289 (14%), Positives = 82/289 (28%), Gaps = 43/289 (14%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTED--KNFPFETLQSLNYHIETCGQKSYNGVAILSKY 74
           R+ +L   + + N D+  LQE  +E   ++   + L +  +          +G+ + SK+
Sbjct: 207 RMQHLGDLLNQKNFDLALLQEVWSERDFESLRQKLLPNYTWAHYFRSGFIGSGLCVFSKH 266

Query: 75  QPIEIVTHLPGDDLDVQARFIEATFT---INTQTLRIGNLYLPHGNPITSTKYDDKISWI 131
              EI  H    +           F    +    L I  + +         +Y+ +    
Sbjct: 267 PIQEIFQHTFSLNGYPYKLHHGDWFCGKAVGMVVLEICGILVNVYVTHLHAEYNREHDSY 326

Query: 132 KRFLRFASQRLELEEPLI--------FAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
                  +  L                +GD N  P          W       LE +   
Sbjct: 327 LAHRVAQAWELAQFIHHTSRRADVVLLSGDLNSHPGDVGYRLIKEWIGLDDSYLETQDFQ 386

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
                          +              S+ +  G+RID+I+     +    +    T
Sbjct: 387 GCEDGCTMVPNNCFVNSKEME---------SFPR--GVRIDYILF-KAISGFHITCDALT 434

Query: 244 KPRG-----------------WTKPSDHTPVIVSLDI-PEPRKKQQDST 274
              G                     SDH  ++ +L I P P +  ++ T
Sbjct: 435 TTTGSGPNDTTGSGPNDTTGHGLPLSDHEALMATLSIRPAPIEHNRNFT 483


>gi|218509998|ref|ZP_03507876.1| putative metal-dependent hydrolase protein [Rhizobium etli Brasil
           5]
          Length = 242

 Score = 54.8 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/272 (13%), Positives = 74/272 (27%), Gaps = 52/272 (19%)

Query: 4   VTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQETKT---------EDKNFPFET 49
           + + T+NV+S      +     +A+ I E   DI+ LQE            +        
Sbjct: 6   IKLLTYNVHSCIGNDRKLDPGRIASVIAEAGADIVALQEVDVLRRRTGGIDQAHLIASLL 65

Query: 50  LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
               ++H      +   G AI++      +         + +          + + L + 
Sbjct: 66  KMQAHFHPALSIAEEQYGDAIITALPTSAVKAGPLPSIGEQRGALSVEVLVGDRKLLVVN 125

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
                 G          +         +    +E   P +  GD+N +P           
Sbjct: 126 THLGLRGRER------IRQMTTLLNSGWLRGAMEEPLPCVLCGDFNALPSSATYRLVARS 179

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
             DA    +                  + +                     +R+DHI ++
Sbjct: 180 LKDAQLGGKAAP----------RATFPSRYPL-------------------MRLDHIFVT 210

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
            +    +  A +    R     SDH P+   +
Sbjct: 211 DDLV--VKRAAVLQN-RLTKVASDHLPLFAEI 239


>gi|260910486|ref|ZP_05917155.1| AP endonuclease domain protein [Prevotella sp. oral taxon 472 str.
           F0295]
 gi|260635432|gb|EEX53453.1| AP endonuclease domain protein [Prevotella sp. oral taxon 472 str.
           F0295]
          Length = 362

 Score = 54.8 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/248 (15%), Positives = 72/248 (29%), Gaps = 21/248 (8%)

Query: 21  LAAWIKENNPDIICLQET----KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQP 76
           +  ++K  + DI+CLQE     K ++            YH        Y+ +AI SKY  
Sbjct: 124 MLNYVKAKDADILCLQEANLGGKFQNT-IDSLLNSIYPYHDIKEKTTIYDRLAIYSKYP- 181

Query: 77  IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
             I+                        T+ + N +        + + + K         
Sbjct: 182 --ILRSQRVMYPQSADFSQACWVATPDDTVLVINNHFATTGLTEAQRQNFKNMLKGDLRT 239

Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIR 196
                L             +     D     + ++     +          +       +
Sbjct: 240 KQMPGLGKSLIHKLGEYAQVRAPQVDAVARFVRKHKGHSVILCGDFNDSPISYARHRMAK 299

Query: 197 ATHDTHHLYS---FWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253
              D +          Y+ +++     +RID+IM S +   L     ++ K     K SD
Sbjct: 300 ELTDCYVASGNGPGISYHRNAFY----VRIDNIMCSDDWQPL--KCVVENKV----KTSD 349

Query: 254 HTPVIVSL 261
           H P+   L
Sbjct: 350 HYPIFCQL 357


>gi|225430370|ref|XP_002282905.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 679

 Score = 54.8 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 8/38 (21%), Positives = 20/38 (52%), Gaps = 2/38 (5%)

Query: 4  VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETK 39
          + + +WN   + ++     +  +++   PD++  QETK
Sbjct: 1  MKIISWNTRGLGSKKKRRVVKDFLRSEKPDVVMFQETK 38


>gi|212711404|ref|ZP_03319532.1| hypothetical protein PROVALCAL_02477 [Providencia alcalifaciens DSM
           30120]
 gi|212685860|gb|EEB45388.1| hypothetical protein PROVALCAL_02477 [Providencia alcalifaciens DSM
           30120]
          Length = 297

 Score = 54.8 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 50/280 (17%), Positives = 80/280 (28%), Gaps = 48/280 (17%)

Query: 4   VTVATWNV--NSIRARIHNLAAW---IKENNPDIICLQET--------KT-EDKNFPFET 49
           + VAT+N+  N + A + NL      I + + D+I L E         K  + +      
Sbjct: 47  IKVATYNIGKNELAADVANLDELSKAIAKIDADVIVLTEIDNKTARSKKVNQLEEIAKAN 106

Query: 50  LQSLNYHIETCGQKSYNGVAILSKYQPI--EIVTHLPGDDLDVQARFIEATFTINTQTLR 107
                +           GV ILSKY+    ++V    G          + T       + 
Sbjct: 107 KMDFAFGKALDFDGGEYGVGILSKYKIEKSQVVNLPSGGAEQRVVLLSQITKPGFDSPII 166

Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167
           I       G  +   K         R +  A+           A    I+    +     
Sbjct: 167 IM------GTHLDWQKDPTIRIGQVRHILDATIGDTETGFDNIAASIKILAGDFNSTAKE 220

Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227
               +  +                             Y  W     +        IDHI 
Sbjct: 221 QPIEEISYF------------------WNPVEKKGVNYRTWPAVNPAID------IDHIF 256

Query: 228 LSPEATSLLHSARI--DTKPRGWTKPSDHTPVIVSLDIPE 265
                   + +  I  D+K   W+K SDH PVI  L++ E
Sbjct: 257 TYKGQVWDVKNMTIPTDSKDFQWSKVSDHLPVIAELELQE 296


>gi|86141529|ref|ZP_01060075.1| hypothetical protein MED217_05907 [Leeuwenhoekiella blandensis
           MED217]
 gi|85832088|gb|EAQ50543.1| hypothetical protein MED217_05907 [Leeuwenhoekiella blandensis
           MED217]
          Length = 285

 Score = 54.8 bits (130), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 45/270 (16%), Positives = 85/270 (31%), Gaps = 27/270 (10%)

Query: 6   VATWNV------NSIRARIHNLAAWIKE----NNPDIICLQETKTEDKNFPFETLQSLNY 55
           ++++N+      + I         W+      +  D+I  QE  T  +    E L     
Sbjct: 28  ISSFNIRYNSPDDGINIWEQR-KDWLTHSIRFHQADLIGTQEV-THTQLLDMEVLLPNYA 85

Query: 56  HIETCGQKSYNG--VAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
           H+    + +  G   AI  K +  E++        +         +      +    L+ 
Sbjct: 86  HVGIGREGATQGEYSAIFYKKERFEVLDSNTFWLSETPDVVASKGWDAALPRIVTWALFK 145

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
              + ++   ++       +  R AS  L  ++     G     P           + +A
Sbjct: 146 DKHSGVSFFHFNTHFDHRGKQARIASAALLTQKIKEITGT---SPVLLTGDFNSSPKTEA 202

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
             TL          N+         +  +     WD  A   + +   RID+I  S    
Sbjct: 203 IATLLSSGLKDPYLNLDADQIYGPEYSANG----WD--ATGRTSDS--RIDYIFYSGGVQ 254

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            L    +I    RG    SDH PVI  +++
Sbjct: 255 PLTL--QILDGQRGERYISDHFPVIAKVEL 282


>gi|147859657|emb|CAN81035.1| hypothetical protein VITISV_011008 [Vitis vinifera]
          Length = 1016

 Score = 54.8 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 63/246 (25%), Gaps = 51/246 (20%)

Query: 15  RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKY 74
           R +   + A I+    D++CLQETK ++                        GV      
Sbjct: 356 RNKRKVIKALIRSQKVDVVCLQETKIQE---------------------MSQGVIHSLGV 394

Query: 75  QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRF 134
                   +                 +    L +G   +          +    + I   
Sbjct: 395 GRFLGWGAVNARGAAGGVVVFWDKRVLELVGLEVGIFSISCRFKNCEDGFMWFFTGIYGP 454

Query: 135 LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDA 194
              +  R    +     GD+N+I  P +               E                
Sbjct: 455 TLKSVIRGLWSDHWCIGGDFNVIRFPSERSREGRLSGSMRRFSE---------------- 498

Query: 195 IRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDH 254
                     Y++    +   +     R+D  ++S +  +        T PR     SDH
Sbjct: 499 -------GGPYTW----SGGLNGQSRSRLDRFLISEDWKNHFSGMSQCTLPR---PVSDH 544

Query: 255 TPVIVS 260
            P+++ 
Sbjct: 545 FPILLD 550


>gi|225463574|ref|XP_002268710.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 1482

 Score = 54.8 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/246 (11%), Positives = 62/246 (25%), Gaps = 30/246 (12%)

Query: 16  ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75
           ++   + A I+    D+ CLQETK +        ++SL                     +
Sbjct: 384 SKRKVIKALIRSQRVDVFCLQETKIQA--MSEGVVRSLG----------TGRFLGWGALE 431

Query: 76  PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135
                  +           ++      + + R+ N+        T           +   
Sbjct: 432 ASGSAGGILVCWDRRTLDVLDVEVGQFSISCRVRNVEDGFCWMFTGVYGPFSRDERECLW 491

Query: 136 RFASQRLE-LEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDA 194
                     + P    GD+NI     +          A           +L ++     
Sbjct: 492 EELGAIRGLWDVPWCLGGDFNITLLQGERSRQGRITG-AMRRFAQMVDELELTDLPLQGG 550

Query: 195 IRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDH 254
               +      S+              R+D  +++              + R     SDH
Sbjct: 551 RCTWNGGRGSQSW-------------ARLDRFLVTQNWLDHFSGVV---QSRLPRPTSDH 594

Query: 255 TPVIVS 260
            P+++ 
Sbjct: 595 FPILLE 600


>gi|300771475|ref|ZP_07081350.1| endonuclease/exonuclease/phosphatase [Sphingobacterium spiritivorum
           ATCC 33861]
 gi|300761464|gb|EFK58285.1| endonuclease/exonuclease/phosphatase [Sphingobacterium spiritivorum
           ATCC 33861]
          Length = 279

 Score = 54.4 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)

Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           RIDHI ++P+    +    I T       PSDH PV+V L
Sbjct: 239 RIDHIFITPQF--SVKKYGILTDTYVGKYPSDHFPVMVDL 276


>gi|301627871|ref|XP_002943090.1| PREDICTED: hypothetical protein LOC100497457 [Xenopus (Silurana)
           tropicalis]
          Length = 1247

 Score = 54.4 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 31/74 (41%), Gaps = 10/74 (13%)

Query: 188 NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRG 247
           +    D  R  +     ++F+ +   +     G RID+I+      + +  A I     G
Sbjct: 325 HTNLRDVWRILNPFSKEFTFYSHSHGT-----GTRIDYILTPTNLLTHVSDATI-----G 374

Query: 248 WTKPSDHTPVIVSL 261
               SDHTP+ +++
Sbjct: 375 NFTYSDHTPISITI 388


>gi|170764194|ref|ZP_02634166.2| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens E str. JGS1987]
 gi|170660566|gb|EDT13249.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens E str. JGS1987]
          Length = 262

 Score = 54.4 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 47/276 (17%), Positives = 79/276 (28%), Gaps = 28/276 (10%)

Query: 1   MSVVTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51
           M  + V T+N+         N    R   +   IK++ PDII  QE      +   + L 
Sbjct: 1   MRNLKVMTFNLKYDFKAQDNNEWSQRCLRITKLIKDHLPDIIGTQEGLIHMLDDMDDLLD 60

Query: 52  SLNY---HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108
             ++     E  G+  +N +  L     +                  +   ++     ++
Sbjct: 61  EYSWVGEDREGNGKDEFNAIFFLKNKFEVLEWNQFWLSKTPNIKGSKDFNSSLPRICTKL 120

Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL-EEPLIFAGDYNIIPQPHDCYNPI 167
                  G  I                      L+  ++         II    +CY   
Sbjct: 121 KLKDKISGLKIDIYNTHLDHESELAREEGIKIILKEVKKNYKIYKTPYIIMGDFNCYLED 180

Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227
              N           F    +    + +   H     Y              G  ID+I+
Sbjct: 181 NLFNIIREEETNNTCFNVCYDNIKNNILGTFHYFKGGY-------------DGRIIDYIL 227

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            S E    + S  ID +      PSDH PVI  L++
Sbjct: 228 YSKEYE--IKSLNIDDRKINRGYPSDHYPVICELEL 261


>gi|255536608|ref|YP_003096979.1| AP endonuclease domain protein [Flavobacteriaceae bacterium
           3519-10]
 gi|255342804|gb|ACU08917.1| AP endonuclease domain protein [Flavobacteriaceae bacterium
           3519-10]
          Length = 325

 Score = 54.4 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/260 (15%), Positives = 71/260 (27%), Gaps = 30/260 (11%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + T N+         +  ++  +  D++  QE            L    Y   T   +
Sbjct: 95  LKIVTMNIKGGGYGREAIYEYLNTSGADVVLAQE--------HMGELSVPGYSHRTDTYE 146

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
                +        +I T   G+      R    T       L   +       P     
Sbjct: 147 LTALNSKTEILHQEKIKTSENGEAFFADIRINGKTIRFVNIYLNPFSFDKSKVKPSEDYD 206

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
            + +           + +   +E  +        P P          N    + E  Q  
Sbjct: 207 KNKRKLRYILSTLIPTFKAHQDEVSVIKKTIAESPYPVIVAGDF---NAVPNSYEYYQLS 263

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + L+++        +       SF DY          IRID++  S E T       +D 
Sbjct: 264 ENLKDVFVETGNGNST------SFHDYKIP-------IRIDYVFCSEEITP--VRYTVDR 308

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
                 K SDH P+I    I
Sbjct: 309 ----RAKMSDHYPIIAEFKI 324


>gi|297154471|gb|ADI04183.1| hypothetical protein SBI_01062 [Streptomyces bingchenggensis BCW-1]
          Length = 297

 Score = 54.4 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/272 (15%), Positives = 79/272 (29%), Gaps = 26/272 (9%)

Query: 4   VTVATWNV--------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN- 54
           + V T+N+        NS   R   +   ++   P ++  QE          +    L  
Sbjct: 41  LRVMTFNLRFASDTEPNSWAQRRPAMRELLRREAPQLLGTQE--GLYGQL-RDIAHDLGP 97

Query: 55  -YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
            Y     G+   +    ++ +     +  L  D   +               +     ++
Sbjct: 98  RYDWLGTGRAGGSRDEFMAVFYDTNRLEPLEYDHFWLSDTPYVIGSNTWGGAVVRMVTWV 157

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
              +  T  ++    + +    + A +R          G    +P+       +    + 
Sbjct: 158 RFHDLRTGGQFYALNTHLDHRSQPARERAAALITERLGGLDAALPRIVTGDFNVAAHGN- 216

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY-SFWDYYADSWSKNKGIRIDHIMLSPEA 232
                       L      D+  A       Y +F  Y         G RID I+ SP  
Sbjct: 217 ------PVYDAMLGGGTLVDSWDAAERRSAQYATFHGYRPLVPD---GDRIDWILTSPTV 267

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
               H A I+   R    PSDH PV   + +P
Sbjct: 268 --HTHYAAINPYSRDGQFPSDHLPVQAVMQLP 297


>gi|255536406|ref|YP_003096777.1| hypothetical protein FIC_02282 [Flavobacteriaceae bacterium
           3519-10]
 gi|255342602|gb|ACU08715.1| hypothetical protein FIC_02282 [Flavobacteriaceae bacterium
           3519-10]
          Length = 302

 Score = 54.4 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/275 (12%), Positives = 75/275 (27%), Gaps = 37/275 (13%)

Query: 4   VTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           + V T+N+         NS   R  +    +   +PD++ +QE     +           
Sbjct: 48  LKVMTYNIRLALDSDKENSWENRKTDALKLLNYYHPDVLGVQE--AVPQQMSDLKNGLAG 105

Query: 55  YHIETCGQKSYNGVAILSKYQP----IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
           Y+    G+   +     S        ++++        +   +  +       +      
Sbjct: 106 YNFVGVGRDDGSNKGEYSAIFFDTAKLQVLQSGTFWLSETPEKPSKGWDAAYNRICTFAL 165

Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170
                G            +     +   ++       L    + N    P          
Sbjct: 166 FKTKKGRRKFW-----AFNVHFDHVGNIAREKSAALILSKIKELNTKNLPVILTGDFNLT 220

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG--IRIDHIML 228
           +       + +      +  + +  + ++     ++       ++  NK    RID+I +
Sbjct: 221 DKTTPMKILSE----NLSDTYRNCAQPSYGPTGTFT-------AFDVNKIPTERIDYIFI 269

Query: 229 SPEATSLLHSARIDTKPR-GWTKPSDHTPVIVSLD 262
                    S R     R     PSDH PV+  L 
Sbjct: 270 -KHL--KCKSHRTINDRRENLLYPSDHFPVMAELK 301


>gi|225867840|ref|YP_002743788.1| hypothetical protein SZO_02270 [Streptococcus equi subsp.
           zooepidemicus]
 gi|225701116|emb|CAW97970.1| hypothetical protein SZO_02270 [Streptococcus equi subsp.
           zooepidemicus]
          Length = 261

 Score = 54.4 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/131 (25%), Positives = 53/131 (40%), Gaps = 7/131 (5%)

Query: 1   MSVVTVATWNVN---SI-RARIHNLAAWIKENNPDIICLQE-TKTEDKNFPFETLQSLNY 55
           M+ +TV+TWN+N    + R     +   +++ N DIICL E  KTE  N     LQ + Y
Sbjct: 10  MTQLTVSTWNINQRSGLGRQIPDMVVTELRQLNADIICLTEYVKTESHNLFCARLQDIGY 69

Query: 56  HIETCGQ--KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
            +    +  +  N + +  K   I        D+ D    F+  T  I  + L I    +
Sbjct: 70  EVFEDDRSLEFGNEILVAIKSSLISDSKFTTIDNDDSNPNFLRVTVNIFGKELNIVGTRI 129

Query: 114 PHGNPITSTKY 124
             G       +
Sbjct: 130 KTGGKDIIEDF 140


>gi|113866485|ref|YP_724974.1| metal-dependent hydrolase [Ralstonia eutropha H16]
 gi|113525261|emb|CAJ91606.1| Metal-dependent hydrolase [Ralstonia eutropha H16]
          Length = 260

 Score = 54.4 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/287 (12%), Positives = 74/287 (25%), Gaps = 45/287 (15%)

Query: 4   VTVATWNVN----SI--RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57
           + V T+N++     I  R RI N+ A +   + DI+ LQE +  +       L       
Sbjct: 3   LRVVTYNIHKGVTGISRRPRIQNVRAGLHAMDADIVFLQEVQDRNDRLVAAAL------- 55

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
               + +         Y       +   D        +     + ++ L I +       
Sbjct: 56  -FDPEHTQLNYLATDAYPHSVYGRNAVYDYGHHGNAILSRHPILMSENLDISDHRFEQRG 114

Query: 118 PITSTKYDDKISWIKRFLRFASQRL-ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
            + +      +      + F       + +          +             ND    
Sbjct: 115 LLHAVADVHGVETHLICVHFGLFARSRVRQAEALVERVRTVVPAGMPLVIAGDFNDWNHR 174

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
           L+ +                  H       +W              +D I         +
Sbjct: 175 LDAQICNTLGAVEASHARGARLHTFPSHMPWWQ-------------LDRIY--------V 213

Query: 237 HSARIDTKP----RGWTKPSDHTPVIVSL-----DIPEPRKKQQDST 274
               I+       R W + SDH P++  L     ++  P +    + 
Sbjct: 214 RGYEIERAHALTGRDWAQRSDHVPLVAELGHPRGELAMPAEPAGKAA 260


>gi|118579337|ref|YP_900587.1| endonuclease/exonuclease/phosphatase [Pelobacter propionicus DSM
           2379]
 gi|118502047|gb|ABK98529.1| Endonuclease/exonuclease/phosphatase [Pelobacter propionicus DSM
           2379]
          Length = 354

 Score = 54.4 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 45/264 (17%), Positives = 76/264 (28%), Gaps = 24/264 (9%)

Query: 4   VTVATWNV----NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           + V TWNV       +     L   I   NPDI+  Q       +       +L  +   
Sbjct: 104 LRVMTWNVKYCSRG-KLAQQALKDDIARANPDIVLFQ-------DAGGVMQGALGSYFAK 155

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
               S     I S++   E            Q  F      I +  + + N++       
Sbjct: 156 WHFHSQEQFVIASRFPLEETEILPISRPSGKQKTFARYRVKIGSTPVSLYNIHFESPREG 215

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
            S       +  + +      +       I      ++ +        +       + + 
Sbjct: 216 LSAV---GSARKRPWYLPKGIQRFERNVSIRLSQARMVQEFISQEKGPVIIGGDLNSPDA 272

Query: 180 RQSFQKLQNMGFTDAI--RATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
            Q    L++ G  DA         +    F       W +   +RIDH+M+S        
Sbjct: 273 SQVCAGLRDAGLHDAFAEGGRGYGYTYGHFLLQRRLPWMRVSWMRIDHVMMSSHF--KAL 330

Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261
             R      G  + SDH PVI  L
Sbjct: 331 GCR-----TGTGEASDHRPVIADL 349


>gi|239817089|ref|YP_002945999.1| endonuclease/exonuclease/phosphatase [Variovorax paradoxus S110]
 gi|239803666|gb|ACS20733.1| Endonuclease/exonuclease/phosphatase [Variovorax paradoxus S110]
          Length = 250

 Score = 54.4 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/285 (14%), Positives = 80/285 (28%), Gaps = 68/285 (23%)

Query: 4   VTVATWNVN----SI----RARIHNLAAWIKENNPDIICLQETKTEDKN----------F 45
           + VAT+N++     I    R  IHNL   I++ + DI+CLQE +  ++            
Sbjct: 8   LRVATYNIHKGVQGIGLARRLEIHNLGHAIEQLDADIVCLQEVRKMNRQAALRFERWPEL 67

Query: 46  P-FETLQSLNYHIETCGQ----KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT 100
           P  + L    Y              +G A+L+++  I        D    Q   +     
Sbjct: 68  PQADFLAPEGYTAVYETNAITRHGEHGNALLTRWPVIRTGHQDISDHRFEQRGLLHVVIE 127

Query: 101 INTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP 160
           +  + +    ++L         +      +I+R +      +   +   +          
Sbjct: 128 VEGRPVHAIVVHLGLIKGSRVRQVARLREFIEREVPPGEAVVVAGDFNDWGARMRYAMNA 187

Query: 161 HDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG 220
               +                          T    +                       
Sbjct: 188 MGLRDTSDLRG------------------PRTLTYPSRLPVAQ----------------- 212

Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRG--WTKPSDHTPVIVSLDI 263
             +D +    E   +  S      PRG  W + SDH P++    +
Sbjct: 213 --LDFVYG-RELEPVACSV-----PRGPIWARMSDHLPLVADFAL 249


>gi|308813431|ref|XP_003084022.1| Glucose-repressible alcohol dehydrogenase transcriptional effector
           CCR4 and related proteins (ISS) [Ostreococcus tauri]
 gi|116055904|emb|CAL57989.1| Glucose-repressible alcohol dehydrogenase transcriptional effector
           CCR4 and related proteins (ISS) [Ostreococcus tauri]
          Length = 603

 Score = 54.4 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/279 (13%), Positives = 78/279 (27%), Gaps = 48/279 (17%)

Query: 15  RARIHNLAAWIKENNPDIICLQETKTEDKN--------FP--FETLQSLNY---HIETCG 61
           ++R+     +I+E + D++CLQE    D +         P     L+S  Y   H+    
Sbjct: 336 KSRLTRTREYIRELDADVLCLQELDGYDDDGSAVTSTSLPSWRSWLESEGYDSRHVRRTN 395

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARF---------------IEATFTINTQTL 106
            K         +     +       +      +                E         L
Sbjct: 396 TKKDGSCVAWRRNAFTCVDHRAVSYNDIAHEMYSKSDNGDVDDERSDERERYLRDCVANL 455

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
            +          +  + +              ++RL +EE   F  +          +  
Sbjct: 456 TVLKRMRDGAEVLVCSTHIFWDPQYSDVKVQQAKRL-VEECERFVDERASAGSDVRPHVI 514

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226
           I  + ++    +V +      +   +    A  +    ++                ID+I
Sbjct: 515 IGGDFNSEPDSDVYRVMTATFSSASSGREPAFTNVTPSFTAC--------------IDYI 560

Query: 227 MLSPEATSLLHSARIDTKPRG-----WTKPSDHTPVIVS 260
            +S   T      +   +  G      T PSDH PV+V 
Sbjct: 561 FVSDGITVTRVKEQPRRETLGEGLPNETHPSDHLPVVVD 599


>gi|228913117|ref|ZP_04076756.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|228846522|gb|EEM91535.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
          Length = 263

 Score = 54.4 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/271 (12%), Positives = 61/271 (22%), Gaps = 19/271 (7%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET------KTEDKNFPFETLQS 52
           + + T N +S +      +I  LA  I+E   D+I LQE       K    N   +    
Sbjct: 1   MKLLTLNCHSWQEENQIEKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGL 60

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           L              +     +   ++                +  F    +        
Sbjct: 61  LLLEELKALHVKDYNITWDFSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTTYWKTR 120

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                 I     +              +     +        +         +       
Sbjct: 121 KIVSATIAYNGKNITFYSCHLGWWNDEEESFKGQVNRLMERVDSNELSFLMGDFNNNARL 180

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                E                           + WD           +RID I+ +   
Sbjct: 181 QGEGYEYMMQEGLYDTYELAIEKDEGTTVQGEIAGWD------ENKHNLRIDLILCNRS- 233

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              + S+++          SDH  V V +DI
Sbjct: 234 -EKIRSSKVVFNGTNRKVISDHFGVEVQVDI 263


>gi|225438167|ref|XP_002262729.1| PREDICTED: hypothetical protein, partial [Vitis vinifera]
          Length = 1167

 Score = 54.4 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/246 (10%), Positives = 66/246 (26%), Gaps = 30/246 (12%)

Query: 16  ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75
           ++   +  +I+    D++C+QETK ++                        G+       
Sbjct: 441 SKRKIIKNYIRNQRVDLMCIQETKIQE---------------------MSEGIVRSLGSG 479

Query: 76  PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135
                  L  +              +       G   L               + +    
Sbjct: 480 RFLDWRALNAEGAAGGILICWDKRVLEILDWEEGQFSLSCRFKTIENGATWAFTGVYGPF 539

Query: 136 RFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAI 195
               +    EE     G ++        +N  +++++      +  + ++         +
Sbjct: 540 TKVEREGMWEELGAIRGLWDDPWCLGGDFNITLFQHERSSQRRISSAMRRFAEFVDDLEL 599

Query: 196 RATHDTHHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDH 254
                    +++          N+   R+D  ++SP            T+ R     SDH
Sbjct: 600 VDLPLQGGEFTW-----SGGLNNQAWARLDRFLVSPSWLDQFSGI---TQGRLSRPTSDH 651

Query: 255 TPVIVS 260
            P+++ 
Sbjct: 652 FPIVLE 657


>gi|147821733|emb|CAN61672.1| hypothetical protein VITISV_040429 [Vitis vinifera]
          Length = 319

 Score = 54.4 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 22/40 (55%), Gaps = 2/40 (5%)

Query: 4   VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTE 41
           + + +WNV      ++   +  +I+    D+IC+QETK +
Sbjct: 167 MKILSWNVRGANDSSKRKVIKTFIRNQRVDVICIQETKIQ 206


>gi|147838572|emb|CAN74312.1| hypothetical protein VITISV_037520 [Vitis vinifera]
          Length = 1915

 Score = 54.4 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/260 (15%), Positives = 81/260 (31%), Gaps = 34/260 (13%)

Query: 5   TVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
            + +WN   + +R     +  ++   NPD++  QETK          +            
Sbjct: 738 KILSWNTRGLGSRKKRRTVRRFLSTQNPDVVMFQETK--------REIWDRRLVSSIWKG 789

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           KS + VA+ +      I        L    +F  +   + + ++ +       G+   S+
Sbjct: 790 KSLDWVALPACGASGGI------VILWDSVKFNCSEKVLGSFSVTVKLNSDEEGSFWLSS 843

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFA--GDYNIIPQPHDCYNPIIWENDACFTLEVR 180
            Y       +       Q L       +   GD+N+I +  +         +     E  
Sbjct: 844 VYGPNKEVWREDFWLELQDLHGLTFPRWCVGGDFNVIRRISEKMGDSRLTVNMRRFDEFI 903

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
                      +  +      +  +++ +   D   K    R+D  +   E      S  
Sbjct: 904 ---------RESGLLDPXPLRNAAFTWSNMQVDPICK----RLDRFLFXAEW-DSFFSQN 949

Query: 241 IDTKPRGWTKPSDHTPVIVS 260
           I      WT  SDH+P+ + 
Sbjct: 950 IQEALPXWT--SDHSPICLE 967


>gi|74011366|ref|XP_852055.1| PREDICTED: similar to LINE-1 reverse transcriptase homolog [Canis
           familiaris]
          Length = 1402

 Score = 54.4 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 54/265 (20%), Positives = 88/265 (33%), Gaps = 36/265 (13%)

Query: 21  LAAWIKENN----PDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQP 76
           +   + E N    P I CLQET    K+     ++       + G +   GVAIL   + 
Sbjct: 141 IFRVLNEKNMQPRPSICCLQETHFRQKDTYSLKIKGWRTIYHSNGPQKKAGVAILISDKL 200

Query: 77  IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
                       D +  +I    +I  + L I N+Y P+                     
Sbjct: 201 KFTPK---TVVRDEEGHYIILKGSIQQEDLTILNIYAPNVGAAKYINQ-----------L 246

Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIR 196
               +  L+   +  GD+N+     D  +            E R     L  M FTD  R
Sbjct: 247 LTKVKKYLDNNTLILGDFNLALSILDRSSKHNIFK------ETRALNDTLNQMDFTDIYR 300

Query: 197 ATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTP 256
             H     Y+F+     ++S     RIDHI+      +      I          SDH  
Sbjct: 301 TLHPNSTEYTFFSSAHGTFS-----RIDHILGHKSGLNRYQKIGIVPCI-----FSDHNA 350

Query: 257 VIVSLDIPEPRKKQQDSTSQNMKPI 281
           + + L+    +K  + S +  ++ I
Sbjct: 351 LKLELN--HNKKFGRTSNTWRLRTI 373


>gi|294777627|ref|ZP_06743078.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           vulgatus PC510]
 gi|319640218|ref|ZP_07994944.1| hypothetical protein HMPREF9011_00541 [Bacteroides sp. 3_1_40A]
 gi|294448695|gb|EFG17244.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           vulgatus PC510]
 gi|317388205|gb|EFV69058.1| hypothetical protein HMPREF9011_00541 [Bacteroides sp. 3_1_40A]
          Length = 359

 Score = 54.4 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 48/275 (17%), Positives = 87/275 (31%), Gaps = 40/275 (14%)

Query: 4   VTVATWNV-----NSIRARIHN----LAAWIKENNPDIICLQET----KTEDKNFPFETL 50
           +   ++N      N  RA   +    +  +++ +N DIICLQE     +   K   +  L
Sbjct: 101 IKFLSYNTMAFEKN--RANTKDNPNPVLEYLRNSNADIICLQEYIVGGRLTKKEVDY-AL 157

Query: 51  QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
           +   Y          NG+   S++    I++  P     +    I     +N  TL + N
Sbjct: 158 RDYPYK-NYHKISGANGLGCYSRFP---ILSAHPVKYASLNNGSIAYKIKVNGDTLLVVN 213

Query: 111 LYLPHGNPITSTKYDDK-ISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
            +L         K   + +       + +     L   L  A     +           +
Sbjct: 214 NHLESNKLTEKDKEVYREMMKDPDKQKVSQGSRLLIRKLAEASAIRAVQADSIARLVAGY 273

Query: 170 EN-----DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRID 224
           +         F         ++   G  DA   + +   +     Y  + +      RID
Sbjct: 274 KGGGIIVCGDFNDSPISYTHRVVGEGLNDAFVESGNGFGI----SYNQNHFY----FRID 325

Query: 225 HIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
           +I+LS    S      +D       K SDH P+  
Sbjct: 326 NILLSKNLKSY--RCTVDNTI----KSSDHYPIWC 354


>gi|228983625|ref|ZP_04143829.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
 gi|228776110|gb|EEM24472.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
          Length = 263

 Score = 54.4 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/271 (12%), Positives = 61/271 (22%), Gaps = 19/271 (7%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET------KTEDKNFPFETLQS 52
           + + T N +S +      +I  LA  I+E   D+I LQE       K    N   +    
Sbjct: 1   MKLLTLNCHSWQEENQIEKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGL 60

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           L              +     +   ++                +  F    +        
Sbjct: 61  LLLEGLKALHVKDYNITWDFSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTTYWKTR 120

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                 I     +              +     +        +         +       
Sbjct: 121 KIVSATIAYNGKNITFYSCHLGWWNDEEESFKGQVNRLMEHVDSNEISFLMGDFNNNARL 180

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                E                           + WD           +RID I+ +   
Sbjct: 181 QGEGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWD------ENKHNLRIDLILCNRS- 233

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              + S+++          SDH  V V +DI
Sbjct: 234 -EKVRSSKVIFNGTNRNIISDHFGVEVQVDI 263


>gi|221114087|ref|XP_002160728.1| PREDICTED: similar to pol-like protein [Hydra magnipapillata]
          Length = 348

 Score = 54.4 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 5/46 (10%)

Query: 1  MSVVTVATWNVNSI---RARIHNLAAWIKENNPDIICLQETKTEDK 43
          M+V  + T+NVN +   R R H +  ++   + +IIC+QE     +
Sbjct: 1  MAV-KILTFNVNGLNEDRKR-HQIIRYLANLDCNIICIQEIHCTSE 44


>gi|13472690|ref|NP_104257.1| hypothetical protein mll3063 [Mesorhizobium loti MAFF303099]
 gi|14023437|dbj|BAB50043.1| mll3063 [Mesorhizobium loti MAFF303099]
          Length = 302

 Score = 54.4 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/306 (12%), Positives = 78/306 (25%), Gaps = 53/306 (17%)

Query: 4   VTVATWNV------NSIR---ARIHNLAAWIKENNPDIICLQET--KTEDKNFPF--ETL 50
           + + ++N+      +  R   +R   +         DII LQE     +   F    E L
Sbjct: 1   MKLVSYNIQYGFGSDG-RYDLSRAARIVD-----GADIIALQEVERHWQRSRFDDQPELL 54

Query: 51  QSL--NYHIETCGQKSYNG--------------VAILSKYQPIEIVTHLPGDDLDVQARF 94
             L   YH         +                  +   +   + + L    +    R 
Sbjct: 55  SRLLSGYHWVYGPAFDMDASERRDGRLINRRRQFGTMVLSKLPIVWSRLHALPMRRTLRP 114

Query: 95  IEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRL------ELEEPL 148
           +          +R     +   +   +    ++      +L    +R             
Sbjct: 115 LNTRNAALECMIRTPAGPVRVLSLHLAHIAAEERLEQIDYLLAEHRRAPSEGGPWSGIDD 174

Query: 149 IFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFW 208
             + ++       +     IW  D        +  + +    +              +  
Sbjct: 175 EPSRNWTSGEIEPENPLAAIWMGDFNMEPGSAEYRRIVGRTPYHRGAAYLDGFVDAAAVA 234

Query: 209 DYYADSWSKN--------KGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
              A  +  +           R+DH  +       + S R D         SDH PV V 
Sbjct: 235 IELAGDFHTHEKIIDGRLAKRRLDHCFVGGVFARRVRSVRSDIGEM----ASDHFPVRVD 290

Query: 261 LDIPEP 266
           +D+  P
Sbjct: 291 IDLETP 296


>gi|227536399|ref|ZP_03966448.1| endonuclease/exonuclease/phosphatase family protein
           [Sphingobacterium spiritivorum ATCC 33300]
 gi|227243775|gb|EEI93790.1| endonuclease/exonuclease/phosphatase family protein
           [Sphingobacterium spiritivorum ATCC 33300]
          Length = 279

 Score = 54.4 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)

Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           RIDHI ++P+    +    I T       PSDH PV+V L
Sbjct: 239 RIDHIFITPQF--SVKKYGILTDTYVGKYPSDHFPVMVDL 276


>gi|212692207|ref|ZP_03300335.1| hypothetical protein BACDOR_01703 [Bacteroides dorei DSM 17855]
 gi|237711516|ref|ZP_04541997.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|237726027|ref|ZP_04556508.1| conserved hypothetical protein [Bacteroides sp. D4]
 gi|265752941|ref|ZP_06088510.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
 gi|212665084|gb|EEB25656.1| hypothetical protein BACDOR_01703 [Bacteroides dorei DSM 17855]
 gi|229435835|gb|EEO45912.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
 gi|229454211|gb|EEO59932.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|263236127|gb|EEZ21622.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
          Length = 359

 Score = 54.4 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 48/275 (17%), Positives = 85/275 (30%), Gaps = 40/275 (14%)

Query: 4   VTVATWNV-----NSIRARIHN----LAAWIKENNPDIICLQET----KTEDKNFPFETL 50
           +   ++N      N  RA   +    +  +++ +N DIICLQE     +   K   +  L
Sbjct: 101 IKFLSYNTMAFEKN--RANTKDNPNPVLEYLRNSNADIICLQEYIVGGRLTKKEVDY-AL 157

Query: 51  QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
           +   Y          +G   L  Y    I++  P     +    I     +N  TL + N
Sbjct: 158 RDYPYKNYY----KISGANGLGCYSRFPILSAHPVRYASLNNGSIAYKIKVNGDTLLVVN 213

Query: 111 LYLPHGNPITSTKYDDK-ISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
            +L         K   + +       + +     L   L  A     +           +
Sbjct: 214 NHLESNKLTEKDKEVYREMMKDPDKQKVSQGSRLLIRKLAEASAIRAVQADSIARLVAGY 273

Query: 170 EN-----DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRID 224
           +         F         ++   G  DA   + +   +     Y  + +      RID
Sbjct: 274 KGGGIIVCGDFNDSPISYTHRVVGEGLNDAFVESGNGFGI----SYNQNHFY----FRID 325

Query: 225 HIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
           +I+LS    S      +D       K SDH P+  
Sbjct: 326 NILLSKNLKSY--RCTVDNTI----KSSDHYPIWC 354


>gi|218681503|ref|ZP_03529390.1| hypothetical protein RetlC8_22861 [Rhizobium etli CIAT 894]
          Length = 242

 Score = 54.4 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/272 (14%), Positives = 77/272 (28%), Gaps = 52/272 (19%)

Query: 4   VTVATWNVNS-IRARIH----NLAAWIKENNPDIICLQETKT---------EDKNFPFET 49
           + + T+NV+S I +        +A+ I E   DI+ LQE            +        
Sbjct: 6   IKLLTYNVHSCIGSDRKLDPGRIASVIAEAEADIVALQEVDVSRRRTGGVDQAHAIASPL 65

Query: 50  LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
               ++H      +   G AI++      +         + +          + + L + 
Sbjct: 66  KMQAHFHPALSIAEEQYGDAIITALPTGAVKAGPLPSIGEQRGALSVEVLVGDRKLLVVN 125

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
                 G          +         +    +    P I  GD+N IP           
Sbjct: 126 THLGLRGRER------IRQMTTLLNAGWLHGSVGESLPAILCGDFNAIPASATYRLAARS 179

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
             DA          Q   +        A +                     +RIDHI ++
Sbjct: 180 LKDA----------QLAGSTAARATFPARYPL-------------------MRIDHIFVT 210

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
            +    +  + +  + R     SDH P++  +
Sbjct: 211 DDLV--VKRSAVM-ESRLTRVASDHLPLLAEI 239


>gi|320159473|ref|YP_004172697.1| hypothetical protein ANT_00630 [Anaerolinea thermophila UNI-1]
 gi|319993326|dbj|BAJ62097.1| hypothetical protein ANT_00630 [Anaerolinea thermophila UNI-1]
          Length = 264

 Score = 54.4 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/273 (11%), Positives = 69/273 (25%), Gaps = 26/273 (9%)

Query: 4   VTVATWNVNSIRA------------RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51
           +T+ T+N   +R             R   +   +++ + D+I LQE      +     ++
Sbjct: 5   LTLVTFN---LRTAEAQDGEFSWARRRDMVVECLRDLDADLIGLQEVH---DDSQARDVR 58

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
           S     E  G +     A   +     +              ++  T  +          
Sbjct: 59  SAFPEYEWIGVRRGGNGAAPLEMNVALVRRGAFEVLEQQF-FWLSRTPEVPGSISWGSAY 117

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC-YNPIIWE 170
                     +  +   +           +  LE   +       +P   +         
Sbjct: 118 VCTAIFLRLRSCRNGAEAAWFNTHLDYLPQARLEGAKLLRRRIEALPPDCNVLVTGDFNA 177

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230
                            +           D     +F  +      +     ID +++S 
Sbjct: 178 GKRSCVYRTLLGEGASCHRLRDAYRAVHTDGRGEGTFHAFGMLPRPQA----IDWVLVSK 233

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +    +  A +     G   PSDH PV   + +
Sbjct: 234 DLP--VEDAGVACVSVGGVYPSDHYPVWAKVRL 264


>gi|301608024|ref|XP_002933593.1| PREDICTED: huntingtin-interacting protein 1-like [Xenopus
           (Silurana) tropicalis]
          Length = 1261

 Score = 54.4 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 40/107 (37%), Gaps = 10/107 (9%)

Query: 155 NIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADS 214
              P   +       +N+      +    + L +M   D  R  +     Y+F+     +
Sbjct: 7   RYNPSEPEKLPKPPQQNNPPTHKNLSLLKKTLSSMQLVDVWREMNPKKKDYTFYSNPHLT 66

Query: 215 WSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           +S     RIDHI         + S++I T        SDH+P+ ++L
Sbjct: 67  YS-----RIDHIWAQQILLPNIISSKIHTTV-----WSDHSPLSLTL 103


>gi|291613446|ref|YP_003523603.1| endonuclease/exonuclease/phosphatase [Sideroxydans lithotrophicus
           ES-1]
 gi|291583558|gb|ADE11216.1| Endonuclease/exonuclease/phosphatase [Sideroxydans lithotrophicus
           ES-1]
          Length = 247

 Score = 54.4 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/268 (9%), Positives = 61/268 (22%), Gaps = 29/268 (10%)

Query: 1   MSVVTVATWNVN-SI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           M+ + +AT+N++        R  +H L   ++E + DI+ LQE             +   
Sbjct: 1   MTTLKIATYNIHKGFSQFNRRVVLHELRERLRELDADIVFLQEV----------QGEHAG 50

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           +        +      L+          +     +        +     Q          
Sbjct: 51  HVQRHADYPAEPQHEFLADEFWAHHAYGMNAVYDEGHHGNAVLSRFPILQAFNKDVSAHR 110

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
             +        +    +   L          +          +        P++   D  
Sbjct: 111 FESRGLLHCEVEIGGQLVHCLCAHFGLFAKGQRAQMRALVEYVLNDIPKDAPLVIAGDFN 170

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
                       +                 +         +      R+D I +      
Sbjct: 171 DWRNQLSRALAKEIGVQDVFGLQEGKPARSF---PSRIPVF------RLDRIYVRGF--- 218

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
            +    +      W + SDH  +   L+
Sbjct: 219 SVQYCDVHIGG-KWRRLSDHAALSAQLE 245


>gi|229015755|ref|ZP_04172735.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1273]
 gi|229021962|ref|ZP_04178522.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1272]
 gi|228739337|gb|EEL89773.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1272]
 gi|228745543|gb|EEL95565.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1273]
          Length = 263

 Score = 54.4 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/271 (12%), Positives = 65/271 (23%), Gaps = 19/271 (7%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET--KTEDKNFP----FETLQS 52
           + + T N +S +      +I  LA  I+E + D+I LQE     + +N       +    
Sbjct: 1   MKLLTLNCHSWQEENQIEKIKYLAKVIQEEDYDVIALQEVSQSIQAENVCGNKKKDNFGL 60

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           L              +     +   ++                +  F    +        
Sbjct: 61  LLLEELRALNVKAYNIIWDFSHIGYDVYEEGLAIITKHNIVKEDTFFISENKDTTYWKTR 120

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                 I     +              +    ++        N         +       
Sbjct: 121 KIVSATIAYNDKNITFYSCHLGWWNDEEESFKDQVDRLMERVNSNELSFLMGDFNNNARL 180

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                E                           + WD           +RID I+ +   
Sbjct: 181 EGEGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWD------ENKHNLRIDLILCNQS- 233

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              +HS+++          SDH  V + LDI
Sbjct: 234 -KTVHSSKVIFNGTNRNVISDHFGVEMQLDI 263


>gi|91095311|ref|XP_973868.1| PREDICTED: similar to reverse transcriptase homolog [Tribolium
           castaneum]
 gi|270017183|gb|EFA13629.1| hypothetical protein TcasGA2_TC005274 [Tribolium castaneum]
          Length = 971

 Score = 54.4 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/275 (13%), Positives = 79/275 (28%), Gaps = 50/275 (18%)

Query: 2   SVVTVATWNVNSI---RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           + + +AT N   +   +A I N    +  +N +I+ + E K   K+FP    +   ++  
Sbjct: 4   NSIKIATANSGGVTRKKAAIENF---LFRDNIEILGITEVKA--KSFP----KFRGFNAI 54

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
                +  G    ++   I I       +  +               +          + 
Sbjct: 55  HRRYPAQQGQRE-TRGVAILIKKGFAFSEHQLPNNLQHLDCIAVDTYI----------DS 103

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
              T +    S  +       Q        I  GD+N               +     + 
Sbjct: 104 NIITFFTYYNSPRQCLSNELMQYAASLPKAIILGDFNARHTDFGDTLTNRNGHILIDAIS 163

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
               ++   +                  +  Y            +DHI+++   ++    
Sbjct: 164 NLPLYRIPNSSPTHINH-----------WEGYSI----------VDHILVTDSLSNRASD 202

Query: 239 -ARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQD 272
            A I     G T  SDH P++  L + +PR    +
Sbjct: 203 SANI-----GTTITSDHLPLVFDLSVSKPRTPTPE 232


>gi|83312933|ref|YP_423197.1| hypothetical protein amb3834 [Magnetospirillum magneticum AMB-1]
 gi|82947774|dbj|BAE52638.1| hypothetical protein [Magnetospirillum magneticum AMB-1]
          Length = 330

 Score = 54.4 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 45/328 (13%), Positives = 84/328 (25%), Gaps = 64/328 (19%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAW----------IKENNPDIICLQE------TKTEDKN 44
           M+ + +AT+N+ ++  R      +           +    D++CLQE      TK+  + 
Sbjct: 1   MTPLRIATFNLENLDERPAGGIDFDDRVALMRPQFQRLRADVLCLQEVNTHSVTKSGPRL 60

Query: 45  FPFETL-----QSLNYHIET-------CGQKSYNGVAILSKYQ--PIEIVTHLPGDDLDV 90
           F          +  ++H               +N V I         ++   L       
Sbjct: 61  FTALDRLLAGTEYEHWHRVHSLNRGGVHPSDKHNLVIISKMPIRAHRQVWHDLVPPCAYR 120

Query: 91  QARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIF 150
             R   A             L+   G P   + +   +        +   + E     + 
Sbjct: 121 PVRANPAPDEPQRVEWDRPILHAELGLPGGRSLHVINVHLRAPRAVWLQGQKERFGRWLS 180

Query: 151 AGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL-------QNMGFTDAIRATHDTHH 203
            G +                       E+  +            N G  +A         
Sbjct: 181 VGGWAEGYFLAGVKQAGQALEVRLLVEEIFDARPDALVVVCGDFNAGEHEAGMRIIKGDD 240

Query: 204 LYSFWDYYADS------WSKNKGIR-----------IDHIMLSPEATSLLHSARIDTKPR 246
             +   + A         S  +G R           +DHI++S         A I  +  
Sbjct: 241 EDTGNGHLAMRMLVPLERSLPEGQRYSVIHHGRPVMLDHILVSRPLLGWYLGAEIHNETL 300

Query: 247 GWTKPSD----------HTPVIVSLDIP 264
           G    S           H PV+    +P
Sbjct: 301 GDELVSPATIHAPPESYHAPVVAEFSLP 328


>gi|126322197|ref|XP_001375523.1| PREDICTED: similar to TRAF and TNF receptor associated protein,
           [Monodelphis domestica]
          Length = 355

 Score = 54.4 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/279 (13%), Positives = 78/279 (27%), Gaps = 47/279 (16%)

Query: 2   SVVTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56
           S  ++ TWN++ +     +AR  ++  ++    PD++ LQE        P        Y+
Sbjct: 105 STFSLITWNIDGLDINNLQARARSVCEYLALYTPDVVFLQEV------IPP-------YY 151

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                + +   +   ++     +V         +         T   + L   ++ +   
Sbjct: 152 DYLKKRATSYRIISGNEDGYFTVVMLKKSRVKLMSHEITPFPATQMMRNLLCVHVSVCGN 211

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
                + + +      R      + +  +             Q       +I+  D    
Sbjct: 212 ELCLMSSHLESTRNHSRERMNQLKIVLKKM------------QEIPESVTVIFGGDTNLR 259

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD---SWSKNKGIRIDHIMLSPEAT 233
                    L +             H  Y+ WD  A+   +   +  +R D I       
Sbjct: 260 DHEVSKVGGLPDKILDVWEFLGKPEHCRYT-WDTQANTNLAIEASCKLRFDRIF----FR 314

Query: 234 SLLHSARIDT---KPRGWTK------PSDHTPVIVSLDI 263
                  I        G  K      PSDH  ++   D+
Sbjct: 315 PAAGDCHIIPRNLDLIGLEKLDCGRFPSDHWGLLCGFDV 353


>gi|147843027|emb|CAN83313.1| hypothetical protein VITISV_001463 [Vitis vinifera]
          Length = 1780

 Score = 54.4 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 8/38 (21%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 4   VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETK 39
           + + +WN   + ++     +  +++   PD++ +QETK
Sbjct: 754 MKIISWNTRGLGSKKKRRVVKXFLRSEKPDVVMIQETK 791


>gi|71834576|ref|NP_001025390.1| sphingomyelin phosphodiesterase 2, neutral [Danio rerio]
 gi|68563437|dbj|BAE06149.1| Mg2+-dependent neutral sphingomyelinase [Danio rerio]
          Length = 420

 Score = 54.4 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/284 (14%), Positives = 73/284 (25%), Gaps = 35/284 (12%)

Query: 4   VTVATWNVNSIR-------ARIHNLAAWIKENNPDIICLQETKTEDKNF--PFETLQSLN 54
           + V + N   IR        R   +   +     DI  LQE  +E        +   S  
Sbjct: 9   LRVFSLNCWGIRFLSKLCAQRYEMIGELLGREQHDIALLQEVWSERDFLFLKRKLSCSHP 68

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN---- 110
           Y          +G+A+ SK++  + + +    +           F      L I      
Sbjct: 69  YTHYFKSGVIGSGLAVFSKHRIQDALLYQYSLNGYPYMLSHGDWFGGKAAGLVIVEVFGL 128

Query: 111 -------LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                        +         +I       +F        + +I  GD N+ P     
Sbjct: 129 KAHVYVTHLHAEYSRAQDGYLPHRIVQSWELQQFVRHTSHGADLVILGGDLNMHPSDLGN 188

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223
                         E  +                T     +              KGIRI
Sbjct: 189 RLLRSHTGLRGCYTETDKFDGCEDGHTLIANNHFTKKQDLI-----------PFEKGIRI 237

Query: 224 DHIML--SPEATSLLHSARIDTKPRGWTKP--SDHTPVIVSLDI 263
           D+I++  S   +    S               SDH  ++  L++
Sbjct: 238 DYILMKGSQRVSVKCESLSTTKGSVSDKPFPYSDHEALMADLNL 281


>gi|298204349|gb|ADI61823.1| endonuclease-reverse transcriptase [Bombyx mori]
          Length = 997

 Score = 54.4 bits (129), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/256 (14%), Positives = 75/256 (29%), Gaps = 18/256 (7%)

Query: 6   VATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + TWNV ++   A    L   + ++  D+  LQE +        +      Y+       
Sbjct: 29  LCTWNVRTLNRPAAFQVLCQQLTQHRADVTALQEIRWV-GQGVVKRADYTAYYSCHPKHH 87

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +    ++ K     I+   P ++     R            +                 
Sbjct: 88  LFGTGFVVGKRLQPLIIDFQPINERMCSIRIKGKFQNYTIINVHAPTEESAPEEKEK--W 145

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y D  S   +  +   + +  +       +    P            ++    +++  S 
Sbjct: 146 YYDVESVYSKAPKGDVKVIIGDLNAKIGREEVYRPTIGLHSLHETSNDNGTRLIDLASSL 205

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
                     +    H   H  +++   AD  ++N+   IDHI++     S L       
Sbjct: 206 NM-----AIGSTCFPHKNIHKVTWFS--ADGVTRNQ---IDHILIDRRHYSNLLDV---R 252

Query: 244 KPRGWTKPSDHTPVIV 259
             RG    SDH  V+ 
Sbjct: 253 SHRGANIDSDHYLVVC 268


>gi|291515920|emb|CBK65130.1| Metal-dependent hydrolase [Alistipes shahii WAL 8301]
          Length = 293

 Score = 54.0 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 45/290 (15%), Positives = 84/290 (28%), Gaps = 57/290 (19%)

Query: 2   SVVTVATWNVNSIRARIHNLA-------AWIKENNPDIICLQETKT------EDKNFPFE 48
            ++ + T+N+   RA     A         I+  +PD + L E         +D +   +
Sbjct: 38  RIIRIMTYNIYGARATSPANAADLDALAEVIRRQDPDFVTLNEVDVFTNRTGKDVHQARD 97

Query: 49  TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108
               L            +G            +       L   A       ++    + I
Sbjct: 98  LAAKLGMEWHFSKAIDRDGGEYGDAVLSKHPIIETRSYRLPCAASQPGEDRSLCVIRVEI 157

Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168
               L   +        D    ++       +  EL+  LI AGD N IP  +       
Sbjct: 158 DGKDLYVASTHLDHLSGDASRLVQANEIRRIRDTELDGDLILAGDLNAIPSSNVIATMTA 217

Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
           +  +                                Y+F         +N   +ID+I+ 
Sbjct: 218 FLTNVGTI--------------------------DQYTFPS-------ENPTRKIDYILY 244

Query: 229 SPEATSLLHSARI----DTKPRGWTKPSDHTPVIVSL------DIPEPRK 268
           +P     + +  +    D +  G    SDH PV+  +      D+PE ++
Sbjct: 245 APIGHFGVQNCTVVSRSDQQVDGVD-ASDHRPVVADIRFQTEEDLPENQE 293


>gi|84393951|ref|ZP_00992692.1| hypothetical protein V12B01_14350 [Vibrio splendidus 12B01]
 gi|84375450|gb|EAP92356.1| hypothetical protein V12B01_14350 [Vibrio splendidus 12B01]
          Length = 292

 Score = 54.0 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 44/275 (16%), Positives = 74/275 (26%), Gaps = 22/275 (8%)

Query: 4   VTVATWN---------VN---SIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFET 49
           +T+++WN         VN   S R  A    L  + +  + D++  QE    D     + 
Sbjct: 23  LTISSWNIEWLSTNEAVNKFSSKRNQADFDKLEQYFQSLDADVVAFQEV---DDVNDIQR 79

Query: 50  LQSLNYHI-ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108
           +    Y I  +      N      +           G  L   A F       +      
Sbjct: 80  ITGNQYKILMSDRALPKNSNRQFKEVNQYTGFAVRKGITLTDYADFPLERSANSKLRFAS 139

Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168
             +     NPI       K      +          ++            +  + Y  + 
Sbjct: 140 YMVVETDSNPIHMLSVHLKAGCSGAYKSNRDCSRLKDQAKQLNKWIQQRERKGEDYAILG 199

Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
             N               QN       R T     + S      +  +      IDHI++
Sbjct: 200 DFNHNLSYSRDWMWKDMTQNTDAQLVTRKTRADCKVRS---NRNNHRTHQFRSVIDHIVV 256

Query: 229 SPEA-TSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
           S     S       +T+     K SDH PV  ++ 
Sbjct: 257 SKSLDASPAKQKVFETQDVLDYKLSDHCPVSTTIK 291


>gi|171318391|ref|ZP_02907548.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria MEX-5]
 gi|171096399|gb|EDT41299.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria MEX-5]
          Length = 269

 Score = 54.0 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/263 (10%), Positives = 64/263 (24%), Gaps = 49/263 (18%)

Query: 4   VTVATWNVNS------IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57
           + +AT+N+         RA    +A  I E + D+I LQE               L    
Sbjct: 29  LRIATYNIRGGYGAWHTRAA-DRIAQVIHELDADVIALQEV-------------PLG--- 71

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
                           +  +  +    G                    L    +      
Sbjct: 72  ------------GTHAHDVLAHLRDATGMHAVAGPTIDTPERRYGNAVLSRCPVRAARTL 119

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
            ++  + + + +        A     +   L  +                          
Sbjct: 120 DLSFHQREPRGALDADIDCSAGTIRVVATHLGLSARERSAQVQRLLAAFDTGAMPVILMG 179

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLY-SFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
           ++ + F + + +               + + +  ++          +D I + P     L
Sbjct: 180 DINEWFVRGRALRALVTRFRRAPAPRTFPTLYPMFS----------LDRIWIHPG--EWL 227

Query: 237 HSARIDTKPRGWTKPSDHTPVIV 259
               +    R   + SDH P++ 
Sbjct: 228 VDVNVHRSVRAR-RASDHYPLVA 249


>gi|7512026|pir||T13173 RNA-directed DNA polymerase (EC 2.7.7.49) - fruit fly  (Drosophila
           melanogaster) transposon TART-B1
 gi|603664|gb|AAC46494.1| putative reverse transcriptase [Drosophila melanogaster]
          Length = 1084

 Score = 54.0 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 81/265 (30%), Gaps = 36/265 (13%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           ++ +A WN   I  +I  L  +I   +  II + ET+ ++ +   E      Y  +    
Sbjct: 9   ILKIAFWNAGGINNKIDELKLFILNIDAHIIIVTETRLDNNSTKLELPGYFTYLAQNPVS 68

Query: 63  KSYNGVAILSKYQPIEIV-THLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
               GVA +       +    +  + +      +       ++ + I ++Y P       
Sbjct: 69  SKRGGVATIVNSSIRHMALKPIEKECIQSAPIVLLPENNRRSEMIVIASVYCPPSLRWLP 128

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
             +          L FA + L  +   I  GD+N   +   C         A +      
Sbjct: 129 HHF-------TDVLNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQ-RGTALYEAVQAD 180

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP--EATSLLHSA 239
           S  ++   G                  D   +  +      ID  +          + S 
Sbjct: 181 STAEIIATGCATHFPH-----------DTRKNPSA------IDFSICKGLGRFEKRISS- 222

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIP 264
                  G    SDH P+++ +++ 
Sbjct: 223 -------GADLSSDHLPILLEINLD 240


>gi|281425257|ref|ZP_06256170.1| hypothetical protein HMPREF0971_02229 [Prevotella oris F0302]
 gi|281400550|gb|EFB31381.1| putative endonuclease/exonuclease/phosphatase family protein
           [Prevotella oris F0302]
          Length = 299

 Score = 54.0 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/272 (15%), Positives = 79/272 (29%), Gaps = 35/272 (12%)

Query: 8   TWNV-----------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY- 55
           ++N+           NS + R  +L  +I    P I   QE   +  +   + L +  Y 
Sbjct: 42  SYNIRYNVSDDIAEGNSWKQRCPHLCDFINFEQPVIFGAQEVLADQLHDLLQGLDNYGYI 101

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
            +     K     A +   + +  +       L          +      +     +   
Sbjct: 102 GVGREDGKEAGEYAAIFYKKDLLKLLDSGYFWLSETPEKPSTGWDAACIRICTWGKFQDK 161

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
            +  T   ++  +  +    R  S RL ++      G               I   D   
Sbjct: 162 ASKKTFYFFNTHMDHVGAVARRESARLIIQRMKELTGG-----------KYTILTGDFNA 210

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLY-SFWDYYADSWSKNKGI-RIDHIMLSPEAT 233
                      ++    D     H       ++ DY         G+ RIDHI ++ +  
Sbjct: 211 NQTDESYKMFSESGFLRDCYVNAHQRMAPVGTWNDYM----QDYPGVARIDHIFVTKDFD 266

Query: 234 SLLHSARIDTKPRGWTKP----SDHTPVIVSL 261
             ++   I T      K     SDH PV+V L
Sbjct: 267 --INHYGIFTNSYWLGKTRRNISDHYPVMVKL 296


>gi|303282397|ref|XP_003060490.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226457961|gb|EEH55259.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 101

 Score = 54.0 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 6/39 (15%)

Query: 6  VATWNVNSIRARIHN------LAAWIKENNPDIICLQET 38
            TWN N    R+ N         +++  +PD+ICLQET
Sbjct: 31 FITWNANGFLGRMKNEVDKACFLKYVERLDPDVICLQET 69


>gi|170763963|ref|ZP_02636372.2| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens B str. ATCC 3626]
 gi|170711168|gb|EDT23350.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens B str. ATCC 3626]
          Length = 262

 Score = 54.0 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 47/276 (17%), Positives = 80/276 (28%), Gaps = 28/276 (10%)

Query: 1   MSVVTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51
           M  + V T+N+         N    R   +   IK++ PDII  QE      +   + L 
Sbjct: 1   MRNLKVMTFNLKYDFKAQDNNEWSQRCLRITKLIKDHLPDIIGTQEGLIHMLDDMDDLLD 60

Query: 52  SLNY---HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108
             ++     E  G+  +N +  L     +                  +   ++     ++
Sbjct: 61  EYSWVGEDREGNGKDEFNAIFFLKNKFEVLEWNQFWLSKTPNIKGSKDFNSSLPRICTKL 120

Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL-EEPLIFAGDYNIIPQPHDCYNPI 167
                  G  I                      L+  ++         II    +CY   
Sbjct: 121 KLKDKISGLKIDIYNTHLDHESELAREEGIKIILKEVKKNYSIEKTPYIIMGDFNCYLED 180

Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227
              N           F    +    + +   H     Y             +G  ID+I+
Sbjct: 181 NLFNIIREEETNNTCFNVCYDNIKNNILGTFHYFKGGY-------------EGKIIDYIL 227

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            S E    + S  ID +      PSDH PVI  L++
Sbjct: 228 YSKEYE--IKSLNIDDRKINGGYPSDHYPVICELEL 261


>gi|298204345|gb|ADI61821.1| endonuclease-reverse transcriptase [Bombyx mori]
          Length = 980

 Score = 54.0 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/270 (9%), Positives = 73/270 (27%), Gaps = 17/270 (6%)

Query: 5   TVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
            ++TWNVN +        +   ++ +N  I+ + ET   +         S    +   G 
Sbjct: 63  RISTWNVNGLLQAGKLSIVEKEMENHNLSILGICETHMRNNG---HFKTSTGNTVYFSGN 119

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           ++ +   +     P      L    +  +   ++         +                
Sbjct: 120 ENSSRNGVAIVLPPYLNQYVLGYHPISDRILTLKLNTKPFITNVIQIYAPTAQAKYEDID 179

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
            +   +      +          +     G+             +             + 
Sbjct: 180 DFYHSLDATLGSIPNREITFIPGDWNAKVGETTA---DGHIRRTVGNFGLGKRNDRGERF 236

Query: 183 FQKLQNMG-FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
            +               H    LY++         +N+   I++I+++    S + + + 
Sbjct: 237 LEFCVEKDLTILNTCFQHHARRLYTWKS--PGDRFRNQ---INYILINSRWRSTVSNVKT 291

Query: 242 DTKPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271
                G    SDH  ++ +  +    +K++
Sbjct: 292 YP---GADCGSDHVLLVANFRLRLKAQKRK 318


>gi|147783925|emb|CAN74690.1| hypothetical protein VITISV_001350 [Vitis vinifera]
          Length = 748

 Score = 54.0 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 22/38 (57%), Gaps = 2/38 (5%)

Query: 4   VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETK 39
           + + +WN   + +R     +  +++  NP+++ +QETK
Sbjct: 376 MKIISWNTRGLGSRNKRRVVKDFLRSENPNVVMIQETK 413


>gi|147782259|emb|CAN76301.1| hypothetical protein VITISV_004811 [Vitis vinifera]
          Length = 1044

 Score = 54.0 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/244 (11%), Positives = 68/244 (27%), Gaps = 30/244 (12%)

Query: 18  IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPI 77
              + + I+    D+ CLQETK +      E ++SL                        
Sbjct: 755 RKIIKSVIRSQKVDLFCLQETKVQV--MSDEMVRSLG----------TGRYLDWKVLNAK 802

Query: 78  EIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF 137
                +           +            I   +   G+           + +      
Sbjct: 803 GTAGGVIICWDKRSLEILGVEEG----QFSISCRFRNEGDGAIW-----VFTGVYGPFSR 853

Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA 197
             +    EE     G +         +N  ++ +D   T  +  + ++   +     +  
Sbjct: 854 EDREGLWEELGAIRGLWEEPWCLGGDFNITLYIDDRNRTXRITSAMRRFAQIIDELGLVD 913

Query: 198 THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP-SDHTP 256
                  +++    +   +     R+D  + +P        +R+    R   +P SDH P
Sbjct: 914 IPLQGGSFTW----SGGLNNQTRARLDRFLATPCWLDQF--SRVLN--RRLPRPTSDHYP 965

Query: 257 VIVS 260
           +++ 
Sbjct: 966 ILLE 969


>gi|300118993|ref|ZP_07056704.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus SJ1]
 gi|298723609|gb|EFI64340.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus SJ1]
          Length = 263

 Score = 54.0 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/271 (12%), Positives = 63/271 (23%), Gaps = 19/271 (7%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET------KTEDKNFPFETLQS 52
           + + T N +S +      +I  LA  I+E   D+I LQE       K    N   +    
Sbjct: 1   MKLLTLNCHSWQEENQIEKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGL 60

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           L              +     +   ++                +  F    +        
Sbjct: 61  LLLEELKALHVKDYNITWDFSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTTYWKTR 120

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                 IT    +              +    ++        +         +       
Sbjct: 121 KIVSATITYNGKNITFYSCHLGWWNDEEESFKDQVNRLMERVDSNELSFLMGDFNNNARL 180

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                E                           + WD           +RID I+ +   
Sbjct: 181 QGEGYEYMMQKGLYDTYELAIKKDEGTTVQGEIAGWD------ENKHNLRIDLILCNRS- 233

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              + S+++          SDH  V V +DI
Sbjct: 234 -EKIRSSKVVFNGTNRKVISDHFGVEVQVDI 263


>gi|261199552|ref|XP_002626177.1| sphingomyelinase [Ajellomyces dermatitidis SLH14081]
 gi|239594385|gb|EEQ76966.1| sphingomyelinase [Ajellomyces dermatitidis SLH14081]
 gi|239615550|gb|EEQ92537.1| sphingomyelinase [Ajellomyces dermatitidis ER-3]
          Length = 525

 Score = 54.0 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 53/341 (15%), Positives = 95/341 (27%), Gaps = 65/341 (19%)

Query: 6   VATWNVNSIRA----RIHNLAAW---IKENN--PDIICLQETKTEDK--NFPFETLQSLN 54
           + T N   ++     R   L      I  ++  P I+ LQE  T++   N   ET + L 
Sbjct: 15  ILTLNCWGLKFLSTYRRERLLEIGKRIARSDDPPHIVGLQECWTQEDYSNIRRETREILP 74

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ---TLRIGNL 111
           Y           G+AILSK+   E   +    +    A F    F         +RIG  
Sbjct: 75  YGKFYFSGIFGGGLAILSKWPIEESTMYEYPLNGRPTAFFRGDWFVGKGVACARIRIGPS 134

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIF------------AGDYNIIPQ 159
                    +  +       +            E   +              GD+N++PQ
Sbjct: 135 PTDTAEVFCTHLHAPYEKEPRDSYLCHRTAQAWEIGKLMRAAAERGHLVIGLGDFNMLPQ 194

Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY-------------- 205
                            + +         +   +  R        +              
Sbjct: 195 SFAHRLITSHAPVKDVWIHLHPDSSIGAAVDAVEMARKKPVPSADFNIIENGATCDGIFN 254

Query: 206 SF-WDYYADSWSKNKG-------------IRIDHIML--------SPEATSLLHSARI-- 241
           ++ W+       K +G              R+D+I +        S      + SAR+  
Sbjct: 255 TWRWNKSQQKRLKREGHIEVDGQLPDPLGKRLDYIFIGDGAYSNFSSPRKWTIVSARVSM 314

Query: 242 -DTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
            +  P      SDH  V  ++ +   +    +    +  PI
Sbjct: 315 MERHPTLHCSLSDHFGVEATITLDVAKDDDSEEDLSSFLPI 355


>gi|306843285|ref|ZP_07475893.1| Endonuclease/exonuclease/phosphatase family protein [Brucella sp.
           BO2]
 gi|306286516|gb|EFM58102.1| Endonuclease/exonuclease/phosphatase family protein [Brucella sp.
           BO2]
          Length = 369

 Score = 54.0 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/309 (13%), Positives = 78/309 (25%), Gaps = 75/309 (24%)

Query: 25  IKENNPDIICLQETKTEDKNFPFETLQ--------SLNYHIETCGQKSYNGVAILSKYQP 76
           I E   DI+CLQE    D        +           Y  +     + +    ++    
Sbjct: 65  IAETRADILCLQEV---DNLAALNAFEYGYLFKMIGYGYRHKYLIDGNDSRGIDVAVMMR 121

Query: 77  IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI----------------- 119
                  P +  +V +             L +  L +   + I                 
Sbjct: 122 DTTRDGQPIEVDEVTSHAHLTYSDFGLYQLELAELGIEPHDRIFKRDCLNVDLRIGGEPL 181

Query: 120 -----------------------TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI 156
                                     +  +  +  +            E   +  GD+N 
Sbjct: 182 SLFVAHLKSMSGARNGLDGRASSHPVRLAEARAIRRIIEEKFGIDRVAERRWLICGDFND 241

Query: 157 IPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS 216
             +            +    +E   +   L   GF   +         ++ +        
Sbjct: 242 YRERILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDRWTLYHTRGPLER 301

Query: 217 KNKGIRIDHIMLSPEATSLLHSA-------------------RIDTKPR-GWTKP--SDH 254
                ++D+IM SP   +    A                    +D  PR GW +P  SDH
Sbjct: 302 --HLCQLDYIMASPAFAAKNEHAVPDIIRRGQPWRTIFPPEQNVDRYPRTGWDRPKASDH 359

Query: 255 TPVIVSLDI 263
            PV V+L++
Sbjct: 360 CPVSVTLNM 368


>gi|23307585|dbj|BAC16719.1| unknown protein [Oryza sativa Japonica Group]
          Length = 443

 Score = 54.0 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/268 (14%), Positives = 86/268 (32%), Gaps = 18/268 (6%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDK---NFPFETLQSLNY-HIETCGQKSYNGVAILS 72
           R  ++   ++E   DII LQ  + E++   +   E  + L   ++         G A+LS
Sbjct: 172 RRRSVEEVLREVGADIIGLQNVRAEEERGMSPLSELAEGLGMRYVFAESWAPEYGNAVLS 231

Query: 73  KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIK 132
           ++      +    D  D                +     +L H +     K  + I    
Sbjct: 232 RWPIKRWKSQRVADQSDFNVLRATIEVPRAG-EVNFHCTHLDHLDESWRMKQMNAILRSS 290

Query: 133 RFLRFASQRLELEEPLIFAG-DYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191
                 +  L   +   ++   +  I + ++       + +    L+ +Q        G 
Sbjct: 291 DGPHILTGGLNALDGTDYSDERWADIVKYYEEIGKPTPKAEVMKYLKGKQYVDAKDFAGE 350

Query: 192 TDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP 251
            +A+          +             G R+D+I+ SP +                   
Sbjct: 351 CEAVVVVAKGQVQGTC----------KYGTRVDYILASPNSPYKFVPGS--YTVISSKGT 398

Query: 252 SDHTPVIVSLDIPEPRKKQQDSTSQNMK 279
           SDH  V V + I + ++  ++S +Q  +
Sbjct: 399 SDHHIVKVDVTIQDKKETDEESGNQRQR 426


>gi|229089490|ref|ZP_04220760.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-42]
 gi|228693876|gb|EEL47569.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-42]
          Length = 263

 Score = 54.0 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/271 (12%), Positives = 62/271 (22%), Gaps = 19/271 (7%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET------KTEDKNFPFETLQS 52
           + + T N +S +      +I  LA  I+E   D+I LQE       K    N   +    
Sbjct: 1   MKLLTLNCHSWQEENQIEKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGL 60

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           L              +     +   ++                +  F    +        
Sbjct: 61  LLLEELKALHVKDYNITWDFSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTTYWKTR 120

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                 I     +              +    ++        +         +       
Sbjct: 121 KIVSATIAYNGKNITFYSCHLGWWNDEEESFKDQVNRLMERVDSNELSFLMGDFNNNARL 180

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                E                           + WD           +RID I+ +   
Sbjct: 181 QGEGYEYMMQEGLYDTYELAIEKDEGTTVQGEIAGWD------ENKHNLRIDLILCNRS- 233

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              + S+++          SDH  V V +DI
Sbjct: 234 -EKIRSSKVVFNGTNRKVISDHFGVEVQVDI 263


>gi|147865204|emb|CAN81959.1| hypothetical protein VITISV_037466 [Vitis vinifera]
          Length = 1786

 Score = 54.0 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/261 (13%), Positives = 75/261 (28%), Gaps = 51/261 (19%)

Query: 4   VTVATWNVNSIRA----RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           V + +WNV   RA    +   +  +I+    D+IC+QETK +                  
Sbjct: 709 VKILSWNVR--RANDSSKRKVINTFIRNQRVDLICIQETKMQ------------------ 748

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
                    ++ S         +  G    +   +      +    + +        + +
Sbjct: 749 -LMTDSIARSLGSGRFLDWKAVNAEGASGGIFICWDRRFRNVKNGVVWVFTGVYGPFSKV 807

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                         +  F + R   E+P    GD+NI   P +        +      E+
Sbjct: 808 ERDAL---------WEEFGAIRGLWEDPWCLRGDFNITLFPRERSXQRRISSAMRKFAEI 858

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHS 238
                 +                  +++     +    N+   R+D  +++P        
Sbjct: 859 VNDLGLVD--------LPLQGGGGEFTW-----NGGQNNQTWARLDRFLVTPSWIDQFSG 905

Query: 239 ARIDTKPRGWTKPSDHTPVIV 259
                 PR     S+H P+++
Sbjct: 906 INQCRLPR---PVSNHFPIML 923


>gi|327354699|gb|EGE83556.1| sphingomyelinase [Ajellomyces dermatitidis ATCC 18188]
          Length = 525

 Score = 54.0 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 53/341 (15%), Positives = 95/341 (27%), Gaps = 65/341 (19%)

Query: 6   VATWNVNSIRA----RIHNLAAW---IKENN--PDIICLQETKTEDK--NFPFETLQSLN 54
           + T N   ++     R   L      I  ++  P I+ LQE  T++   N   ET + L 
Sbjct: 15  ILTLNCWGLKFLSTYRRERLLEIGKRIARSDDPPHIVGLQECWTQEDYSNIRRETREILP 74

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ---TLRIGNL 111
           Y           G+AILSK+   E   +    +    A F    F         +RIG  
Sbjct: 75  YGKFYFSGIFGGGLAILSKWPIEESTMYEYPLNGRPTAFFRGDWFVGKGVACARIRIGPS 134

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIF------------AGDYNIIPQ 159
                    +  +       +            E   +              GD+N++PQ
Sbjct: 135 PTDTAEVFCTHLHAPYEKEPRDSYLCHRTAQAWEIGKLMRAAAERGHLVIGLGDFNMLPQ 194

Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY-------------- 205
                            + +         +   +  R        +              
Sbjct: 195 SFAHRLITSHAPVKDVWIHLHPDSSIGAAVDAVEMARKKPVPSADFNIIENGATCDGIFN 254

Query: 206 SF-WDYYADSWSKNKG-------------IRIDHIML--------SPEATSLLHSARI-- 241
           ++ W+       K +G              R+D+I +        S      + SAR+  
Sbjct: 255 TWRWNKSQQKRLKREGHIEVDGQLPDPLGKRLDYIFIGDGAYSNFSSPRKWTIVSARVSM 314

Query: 242 -DTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
            +  P      SDH  V  ++ +   +    +    +  PI
Sbjct: 315 MERHPTLHCSLSDHFGVEATITLDVAKDDDSEEDLSSFLPI 355


>gi|322704280|gb|EFY95877.1| exonuclease III [Metarhizium anisopliae ARSEF 23]
          Length = 539

 Score = 54.0 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/293 (11%), Positives = 75/293 (25%), Gaps = 41/293 (13%)

Query: 2   SVVTVATWNVN-SIRARI----HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56
             + V T N+    R  +      + +++   + D++ LQE+  +D        ++L ++
Sbjct: 258 RSIRVLTLNLWLGGRNVVDYHTKQV-SFLASQDVDVVALQESYFQDG---RRLAKALGWN 313

Query: 57  IETCGQKSYNGVAILSKYQPIEIVT-------------HLPGDDLDVQARFIEATFTINT 103
           +          V+ILS+Y    +                     L        A +    
Sbjct: 314 V-----WQAKDVSILSRYPIGRVYREIEAGGTVRIDLDGDAKQLLVWNVHLNNAPYGPYD 368

Query: 104 QTL--RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161
                   N            +   +I    +  +      EL   ++     +     +
Sbjct: 369 LCFTNYSTNYIQRREEWARRVQQVYEIVHRLKEYKERKPEFELLPQILAGDFASPSHLDY 428

Query: 162 DCYNPIIWENDACFTLEVRQSF---QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN 218
                 +                         F D  R         ++      +  + 
Sbjct: 429 TMKTRDLHCKGRDPFPWPVSRRVVLDAKWKDSFRDVFRDPWKVPGN-TWSPVRRLNGDRP 487

Query: 219 KGI-RIDHIMLSPEATSLLHSARIDTKPR------GWTKPSDHTPVIVSLDIP 264
           + + RID I       +      +   P+           SDH  V+    +P
Sbjct: 488 EPMDRIDFIY-HKMLKTTHSDVVVVGDPKPEPYHADNEWTSDHAAVVSEFQLP 539


>gi|196034583|ref|ZP_03101991.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus W]
 gi|228944177|ref|ZP_04106556.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|195992626|gb|EDX56586.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus W]
 gi|228815566|gb|EEM61808.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
          Length = 263

 Score = 54.0 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/271 (12%), Positives = 62/271 (22%), Gaps = 19/271 (7%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET------KTEDKNFPFETLQS 52
           + + T N +S +      +I  LA  I+E   D+I LQE       K    N   +    
Sbjct: 1   MKLLTLNCHSWQEENQIEKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGL 60

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           L              +     +   ++                +  F    +        
Sbjct: 61  LLLEELKALHVKDYNITWDFSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTTYWKTR 120

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                 I     +              +    ++        +         +       
Sbjct: 121 KIVSATIAYNGKNITFYSCHLGWWNDEEESFKDQVNRLMERVDSNELSFLMGDFNNNARL 180

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                E                           + WD           +RID I+ +   
Sbjct: 181 QGEGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWD------ENKHNLRIDLILCNRS- 233

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              + S+++          SDH  V V +DI
Sbjct: 234 -EKIRSSKVVFNGTNRKVISDHFGVEVQVDI 263


>gi|324324468|gb|ADY19728.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           thuringiensis serovar finitimus YBT-020]
          Length = 263

 Score = 54.0 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/271 (12%), Positives = 62/271 (22%), Gaps = 19/271 (7%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET------KTEDKNFPFETLQS 52
           + + T N +S +      +I  LA  I+E   D+I LQE       K    N   +    
Sbjct: 1   MKLLTLNCHSWQEENQIEKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGL 60

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           L              +     +   ++                +  F    +        
Sbjct: 61  LLLEELKALHVKDYNITWDFSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTTYWKTR 120

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                 I     +              +    ++        +         +       
Sbjct: 121 KIVSATIAYNGKNITFYSCHLGWWNDEEESFKDQVNRLMERVDSNELSFLMGDFNNNARL 180

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                E                           + WD           +RID I+ +   
Sbjct: 181 QGEGYEYMMQEGLYDTYELAIEKDEGTTVQGEIAGWD------ENKHNLRIDLILCNRS- 233

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              + S+++          SDH  V V +DI
Sbjct: 234 -EKVRSSKVIFNGTNRNVISDHFGVEVQVDI 263


>gi|190894773|ref|YP_001985066.1| putative metal-dependent hydrolase [Rhizobium etli CIAT 652]
 gi|190700434|gb|ACE94516.1| putative metal-dependent hydrolase protein [Rhizobium etli CIAT
           652]
          Length = 242

 Score = 54.0 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/272 (13%), Positives = 74/272 (27%), Gaps = 52/272 (19%)

Query: 4   VTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQETKT---------EDKNFPFET 49
           + + T+NV+S      +     +A+ I E   DI+ LQE            +        
Sbjct: 6   IKLLTYNVHSCIGNDRKLDPGRIASVIAEAGADIVALQEVDVLRRRTGGIDQAHLIASLL 65

Query: 50  LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
               ++H      +   G AI++      +         + +          + + L + 
Sbjct: 66  KMQAHFHPALSVAEEQYGDAIITALPTSAVKAGPLPSIGEQRGALSVEVLVGDRKLLVVN 125

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
                 G          +         +    +E   P +  GD+N +P           
Sbjct: 126 THLGLRGRER------IRQMTTLLNSGWLRGAMEEPLPCVLCGDFNALPSSATYRLVARS 179

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
             DA    +                  + +                     +R+DHI ++
Sbjct: 180 LKDAQLGGKASP----------RATFPSRYPL-------------------MRLDHIFVT 210

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
            +    +  A +    R     SDH P+   +
Sbjct: 211 DDLV--VKRAAVLQN-RLTNVASDHLPLFAEI 239


>gi|147768838|emb|CAN75888.1| hypothetical protein VITISV_023640 [Vitis vinifera]
          Length = 3804

 Score = 54.0 bits (128), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/235 (14%), Positives = 64/235 (27%), Gaps = 32/235 (13%)

Query: 28  NNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDD 87
              D+ C+QETK +      E ++SL         K+ N +              L    
Sbjct: 654 EKVDLFCIQETKMQV--MSEEVVRSLG-PGRYLDWKALNAMGTAGGVLICWDKRSLELLG 710

Query: 88  LDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEP 147
           ++     I   F      +    +++  G     ++ D +  W +               
Sbjct: 711 VEEGQFSISCRFRNVGDGV----IWVFTGVYGPCSRKDRECLWEEFGAIRGLWEDPWCLG 766

Query: 148 LIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF 207
             F        +  +          A    E+      L                  +++
Sbjct: 767 GDFNSTLYQAERSRNGRITSAMRRFAQVIDELGLIDIPL--------------QGGSFTW 812

Query: 208 WDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKP-SDHTPVIVS 260
                     N+   R+D  ++SP        A      R   +P SDH P+++ 
Sbjct: 813 -----SGGLNNQSWARLDRFLVSPNWIDQYSRA----NQRRLPRPISDHFPILLE 858


>gi|218895489|ref|YP_002443900.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus G9842]
 gi|218543762|gb|ACK96156.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus G9842]
          Length = 263

 Score = 54.0 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/271 (12%), Positives = 63/271 (23%), Gaps = 19/271 (7%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET--KTEDKNFP----FETLQS 52
           + + T N +S +      +I  LA  I+E   D+I LQE     + +N       +    
Sbjct: 1   MKLLTLNCHSWQEENQIEKIQYLAKVIQEEEYDVIALQEVSQSIQAENVCGNKKKDNFGL 60

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           L              +     +   ++                +  F    +        
Sbjct: 61  LLLEELKALHVKDYNITWDFSHIGYDVYEEGLAIITKHNIIKEDTFFISENEDTTYWKTR 120

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                 I     D              +     +        +         +       
Sbjct: 121 KIVSTTIAYNGKDITFYSCHLGWWNDEEESFKGQFDRLMERVDSNKLAFLMGDFNNNARL 180

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                E                           + WD           +RID I+ +   
Sbjct: 181 EGEGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWD------ENKHNLRIDLILCNQS- 233

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              +HS+++          SDH  V V LDI
Sbjct: 234 -KKVHSSKVIFNGTNRNVISDHFGVEVQLDI 263


>gi|290995827|ref|XP_002680484.1| phosphatase [Naegleria gruberi]
 gi|284094105|gb|EFC47740.1| phosphatase [Naegleria gruberi]
          Length = 310

 Score = 54.0 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 47/298 (15%), Positives = 90/298 (30%), Gaps = 41/298 (13%)

Query: 2   SVVTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQETK--------------TED 42
           ++++  ++NV+       R+ +  L  ++ +NN DI+CL E                  +
Sbjct: 16  NLLSCCSFNVHHFSTAYGRSNLTELYKYLHKNNFDIVCLNEVYEDSEYSHPLRDLVYALN 75

Query: 43  KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN 102
            + P E   +  Y   +    +Y    ILSKY  +       G               + 
Sbjct: 76  SSLPEEVEVARPYQYRSGP-TNYESNIILSKYPILFQEKKDVGRGERSVLGIKIDHPLVR 134

Query: 103 TQTLRIGNLYLPHGNPIT-------STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYN 155
              +   +    +   +           + D+           +  L  +   +   DY 
Sbjct: 135 NVFVTHLDHVSENKRVLQLKRVLSFMKHFIDRKLVDYPNDENKNFILLGDFNSMRMDDYT 194

Query: 156 IIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL--YSFWDYYAD 213
                +     I +  +A  T      F +           A      +     W     
Sbjct: 195 DKFWDYLIKQRIQYGWEAPDTQVTSLLFNEPTTPESHSTEEADEPKLKMPLVDCWKVLNP 254

Query: 214 S--WSKNKGI-------RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
              +   KG        RID+++ + E    L  + ID+   G    SDH PV+V  +
Sbjct: 255 DIIFEGEKGTGSSRLDTRIDYVISNTELQPYLKQSWIDSDASGI---SDHLPVVVLFE 309


>gi|163788842|ref|ZP_02183287.1| endonuclease/exonuclease/phosphatase family protein
           [Flavobacteriales bacterium ALC-1]
 gi|159876079|gb|EDP70138.1| endonuclease/exonuclease/phosphatase family protein
           [Flavobacteriales bacterium ALC-1]
          Length = 575

 Score = 54.0 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 41/288 (14%), Positives = 81/288 (28%), Gaps = 36/288 (12%)

Query: 2   SVVTVATWNV--NSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL---- 53
           S + + T+N   N      R+ N    I+   PDII L E     + +    L +     
Sbjct: 214 SDIRLMTYNTLFNGFNDVDRVDNFENIIRSIAPDIIGLNECWNTSETYVKSLLDTWLPTG 273

Query: 54  ---NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
               +++E        G   LS+++ I+   +L      +          +         
Sbjct: 274 TQNGWYVE-----KIGGQITLSRWEIIQEWQNLSRQFPVLIDLPSSYPTDLLFTN--AHL 326

Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170
                         +     +       +  L    P I++GD N++             
Sbjct: 327 NCCGADQQRQDQADEYAAFILDAKSPGGNITLPENTPFIYSGDLNLVGYAQQLTTLKT-G 385

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230
           +          +     +    +      D    Y++     + +   K   +D I+ S 
Sbjct: 386 DIQDTATYGVGAPLDWDDTALKEENSIQTDLRMGYTWRSD-GEGFPPGK---LDFIIFSD 441

Query: 231 EATSLLHSARIDTKPRGWTK-------------PSDHTPVIVSLDIPE 265
              +   S  + T+     +              SDH PV+    I E
Sbjct: 442 HTLTAEKSFVLQTEVMPTDRLNLYNLNLLDTSSASDHFPVVADFSINE 489


>gi|118476126|ref|YP_893277.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           thuringiensis str. Al Hakam]
 gi|118415351|gb|ABK83770.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           thuringiensis str. Al Hakam]
          Length = 267

 Score = 54.0 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/273 (12%), Positives = 64/273 (23%), Gaps = 19/273 (6%)

Query: 2   SVVTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET------KTEDKNFPFETL 50
           + + + T N +S +      +I  LA  I+E   D+I LQE       K    N   +  
Sbjct: 3   NNMKLLTLNCHSWQEENQIEKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNF 62

Query: 51  QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
             L              +     +   ++                +A F    +      
Sbjct: 63  GLLLLEELKALHVKDYNITWDFSHIGYDVYEEGLAIITKHNVVKEDAFFISENKDTTYWK 122

Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170
                   I     +              +    ++        +         +     
Sbjct: 123 TRKIVSATIAYNGKNITFYSCHLGWWNDEEESFKDQVNRLMERVDSNELSFLMGDFNNNA 182

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230
                  E                           + WD           +RID I+ + 
Sbjct: 183 RLQGEGYEYMMQEGLYDTYELAIEKDEGTTVQGEIAGWD------ENKHNLRIDLILCNR 236

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                + S+++          SDH  V V +DI
Sbjct: 237 S--EKIRSSKVVFNGTNRKVISDHFGVEVQVDI 267


>gi|57235078|ref|YP_180859.1| endonuclease/exonuclease/phosphatase family protein
           [Dehalococcoides ethenogenes 195]
 gi|57225526|gb|AAW40583.1| endonuclease/exonuclease/phosphatase family protein
           [Dehalococcoides ethenogenes 195]
          Length = 591

 Score = 54.0 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/267 (11%), Positives = 67/267 (25%), Gaps = 43/267 (16%)

Query: 3   VVTVATWNV-NSIRAR----IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57
            + + T+N+ N    +    +  LA  I+++  D++ LQE                    
Sbjct: 363 TLRIMTYNLHNGFNTQGKLDLEALARVIEDSGADVVALQEI------------------S 404

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
                     +      +                   +     ++T  + + +     G 
Sbjct: 405 RGWVISGRVDMLEWLAQRLNMHFAFGATAGEYWGNAILSKYPILDTHNVSLES----EGL 460

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
           PI     +  +    R+L  A+  L                     ++         F  
Sbjct: 461 PIKRGYLNAVLDLGVRYLYLAATHLHHVPEEGEVRVIQAEELADFWHHAPSTVIMGDFNA 520

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
           E   +   +              +   Y          + +   RID+I  SP       
Sbjct: 521 EPDSAEIAILRQAGFSDSLEGQTSVLTYH---------AADLYQRIDYIWASP------- 564

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDIP 264
                     ++  SDH  +I  + + 
Sbjct: 565 DIEYLDSYTVFSLASDHLAIIADIRLS 591


>gi|254477073|ref|ZP_05090459.1| endonuclease/exonuclease/phosphatase family protein [Ruegeria sp.
           R11]
 gi|214031316|gb|EEB72151.1| endonuclease/exonuclease/phosphatase family protein [Ruegeria sp.
           R11]
          Length = 242

 Score = 54.0 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 39/275 (14%), Positives = 67/275 (24%), Gaps = 60/275 (21%)

Query: 1   MSVVTVATWNVN---S--IRARIHNLAAWIKENNPDIICLQET--KTED--KNFPFETLQ 51
           M  + +AT+N+       +R R       I+    D++ LQE   +        P   L 
Sbjct: 11  MGRLRLATYNIQKSVGMDLRRRPRRTLKVIEGTGADLVLLQEADKRLPPRPAALPHFVLD 70

Query: 52  SLNYHIETCGQKS----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107
              +HI   G       +    I        +               + A F      LR
Sbjct: 71  EAGWHIVDLGGAGSLGWHGNAVIWRGDALRLVDQGHIPLPGLEPRGAVWARFETALGPLR 130

Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167
           +   +L                         + R   E+    A      P         
Sbjct: 131 VVGAHLGL-----------------------TTRARHEQVHHLARHIASEPDLPTVCAGD 167

Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227
             E        +     +L+ +    +  A                         +D I 
Sbjct: 168 FNEWS--RQPVLDHIAPQLRFVPPKASFPALRPIGA-------------------LDRIA 206

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
           +S      +  + +    R     SDH PV   L+
Sbjct: 207 VSRGL--RVVESGVYR-ARPAHVASDHLPVWADLE 238


>gi|229095084|ref|ZP_04226080.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-29]
 gi|229101186|ref|ZP_04231952.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-28]
 gi|229114038|ref|ZP_04243464.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock1-3]
 gi|228669497|gb|EEL24913.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock1-3]
 gi|228682314|gb|EEL36425.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-28]
 gi|228688414|gb|EEL42296.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-29]
          Length = 263

 Score = 54.0 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/271 (12%), Positives = 62/271 (22%), Gaps = 19/271 (7%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET--KTEDKNFP----FETLQS 52
           + + T N +S +      +I  LA  I+E   D+I LQE     + +N       +    
Sbjct: 1   MKLLTLNCHSWQEENQMEKIKYLAKVIQEEEYDVIALQEVSQSIQAENVCGNKKKDNFGL 60

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           L              +     +   ++                +  F    +        
Sbjct: 61  LLLEELKALHVKDYNITWDFSHIGYDVYEEGLAIITKHTIIKEDTFFISENKDTTYWKTR 120

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                 I     D              +     +        +         +       
Sbjct: 121 KIVSATIAYNGKDITFYSCHLGWWNDEEESFQGQVDRLMERVDSNELSFLMGDFNNNARL 180

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                E                           + WD           +RID I+ +   
Sbjct: 181 QGEGYEYLMQKGLYDTYELAIEKDEGTTVQGEIAGWD------ENKHNLRIDLIVCNQS- 233

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              + S+++          SDH  V V LDI
Sbjct: 234 -KRVRSSKVIFNGTNRNVISDHFGVEVQLDI 263


>gi|218460813|ref|ZP_03500904.1| putative metal-dependent hydrolase protein [Rhizobium etli Kim 5]
          Length = 242

 Score = 54.0 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/272 (13%), Positives = 73/272 (26%), Gaps = 52/272 (19%)

Query: 4   VTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQETKT---------EDKNFPFET 49
           + + T+NV+S      +     +A+ I E   DII LQE            +        
Sbjct: 6   IKLLTYNVHSCIGNDRKLDPGRIASVIAEAGADIIALQEVDVLRRRTGGVDQAHLIASLL 65

Query: 50  LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
               ++H      +   G AI++      +         + +          + + L + 
Sbjct: 66  KMQAHFHPALSVAEEQYGDAIITALPTAAVKAGPLPSIGEQRGALSVEVLVGDRKLLVVN 125

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
                 G          +         +     +   P I  GD+N IP           
Sbjct: 126 THLGLRGRDR------IRQMTTLLNSGWLRGTKDEPLPCILCGDFNAIPSSATYRLATRS 179

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
             DA    +                  + +                     +R+DHI ++
Sbjct: 180 LKDALLGGKAAP----------RATFPSRYPL-------------------MRLDHIFVT 210

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
            +    +  A +    R     SDH P+   +
Sbjct: 211 DDLV--VQRATVLQN-RLTRVASDHLPLFAEI 239


>gi|120436892|ref|YP_862578.1| endonuclease/exonuclease/phosphatase family protein [Gramella
           forsetii KT0803]
 gi|117579042|emb|CAL67511.1| endonuclease/exonuclease/phosphatase family protein [Gramella
           forsetii KT0803]
          Length = 276

 Score = 54.0 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/264 (13%), Positives = 80/264 (30%), Gaps = 27/264 (10%)

Query: 6   VATWNV---------NSIRARIHNLAAWIKENNPDIICLQE-TKTEDKNFPFETLQSLNY 55
           V T+N+         NS   R   +   I+   PD++ +QE  K++   F  E + +   
Sbjct: 24  VMTYNIKYANENDGENSWSQRKEWITDQIQFYEPDVLGVQEAVKSQLDFFT-ENINNYKV 82

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
                  +     + +        V       L      I   +  +   +    L+   
Sbjct: 83  LGVGREGEDKGEFSAILYKSDKFDVLKSNTFWLSETPEKISKGWDADYNRICTYALFQEK 142

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
            +      ++     +    R  S +L +++      +   +    D       E     
Sbjct: 143 ESEKKIWVFNTHFDHVGDKARLESSKLIIQKIKELNREALPVFLMGDFNLEQESEGIRLI 202

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
           +  + +S +K       +     ++     +               RID+I  + +    
Sbjct: 203 SEFMEKSKEKADFKFGPEGTFNGYNFTEAVT--------------RRIDYIFTNNQV--H 246

Query: 236 LHSARIDTKPRGWTKPSDHTPVIV 259
           +    + +  +    PSDH PV++
Sbjct: 247 IKKYAVLSDSKNLKYPSDHFPVLI 270


>gi|299145020|ref|ZP_07038088.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. 3_1_23]
 gi|298515511|gb|EFI39392.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. 3_1_23]
          Length = 289

 Score = 53.6 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/284 (13%), Positives = 69/284 (24%), Gaps = 43/284 (15%)

Query: 4   VTVATWNV-----------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52
           + VA++NV           N    R   L   I  ++ DI   QE K    N   + L +
Sbjct: 21  LNVASYNVRNSNPNDAKAGNGWEQRCPVLTRLITFHDFDIFGAQEVK---HNQLEDMLNA 77

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHL----PGDDLDVQARFIEATFTINTQTLRI 108
           L  +      +                            L          +      +  
Sbjct: 78  LPQYSYIGVGRDDGKTKGEYAPIFYRKDKFKLLKSGNFWLSEDTSKPNKGWDAAYTRICT 137

Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168
              +           ++  +  I    R  S +L + +     G   +I       +   
Sbjct: 138 WGEFKDITGKFRFWFFNLHMDHIGVVARRESAKLVISKIKEMCGKDPVILTGDFNVDQTS 197

Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
                     +     ++  + +           + Y+           N   RIDHI +
Sbjct: 198 ESYQVLHESGILSDSYEVAQLRYATNGTCAGWNPNTYT----------PN---RIDHIFV 244

Query: 229 SPEATSLLHSARIDTKPRGWTK----------PSDHTPVIVSLD 262
           +      +    + T                 PSDH PV   L 
Sbjct: 245 TKNFA--VEKYGVLTDTYRIKNEATGKYEARIPSDHFPVKAVLK 286


>gi|154270790|ref|XP_001536249.1| predicted protein [Ajellomyces capsulatus NAm1]
 gi|150409823|gb|EDN05263.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 1307

 Score = 53.6 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/288 (12%), Positives = 76/288 (26%), Gaps = 43/288 (14%)

Query: 2   SVVT----VATWNV-NSIRARIHNLAAWIK----ENNPDIICLQETKTEDKNFPFETLQS 52
           + +     +  +NV NS  AR+  + A +     E+  D+I +QE             +S
Sbjct: 366 ATMRDTLNLLQYNVHNS--ARV--MGALLADPATEDKYDVIAVQEPSRNPHMLATHCPRS 421

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
             +      +       +        +               +  T  +    +      
Sbjct: 422 CGFWPAYHPETRP---RVCFLVNKRLVEHTWECHYHSEYIAVLTITTDLGKVQIVNVYAP 478

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
            P G      +           +   ++ + L +  +    +  +    +          
Sbjct: 479 PPGGYSSEPEESTIGQLQEVAGMGTDAELVILGDLNVHHERWGGVRVERNFRMAWQLI-- 536

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                               D +     T    + W           G  ID   LSP  
Sbjct: 537 -----------------AQVDRLGLQLATPVGATTWQDRGSP-----GTTIDLTFLSPLL 574

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
              L    I  +     K SDH P+  +L++    K+ +    +N +P
Sbjct: 575 HDKLRRCAIAEEA---CKGSDHKPIETTLELTPIPKEAERRNWKNAEP 619


>gi|147778987|emb|CAN62539.1| hypothetical protein VITISV_031160 [Vitis vinifera]
          Length = 1672

 Score = 53.6 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 22/38 (57%), Gaps = 2/38 (5%)

Query: 4   VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETK 39
           + + + NV  + +R     +  +++  NPD++ +QETK
Sbjct: 668 MKIISXNVRGLGSRNKRRMVKDFLRSENPDVVMIQETK 705


>gi|94957776|gb|ABF47138.1| inositol phosphorylsphingolipid-phospholipase C [Cryptococcus
           neoformans var. grubii]
          Length = 529

 Score = 53.6 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 44/260 (16%), Positives = 79/260 (30%), Gaps = 27/260 (10%)

Query: 3   VVTVATWNVNSI------R-ARIHNLAAWIKENNPDIICLQETKT-EDKNFPFETLQ-SL 53
            + V ++NV  +      R  RIH +A ++  +N DI+CLQE    +D     E +Q +L
Sbjct: 13  TLKVLSFNVWGLAIVAKNRHTRIHAIAEYLASSNYDIVCLQELWIYKDYEVVREEVQRNL 72

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIV-----------THLPGDDLDVQARFIEATFTIN 102
            +          +G+AI +++  I                  GD    +A          
Sbjct: 73  PFSRFFHTGALGSGLAIFTRFPLIAAHALPYSLSGSPAQAFAGDFFVKKAAANVVILHPV 132

Query: 103 TQTLRIGNLYLP-HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161
              + I N ++   G     T+   +I+   +              +   GD+N  P   
Sbjct: 133 LGEVEIWNTHMHAAGEHPPDTRQAHRIAQSWQLANAVRGGAAKGRYVFVMGDFNSQPWSI 192

Query: 162 DCYNPIIWENDACFTLEVRQ------SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW 215
                           +V        S                    + YS      +  
Sbjct: 193 PIAMMRDHAQLMDSFDQVHPSANSEISPPPSPAEALKVYGMTCDSPLNTYSAGKPIPEHV 252

Query: 216 SKNKGIRIDHIMLSPEATSL 235
            +  G R+D+I     A + 
Sbjct: 253 LEKGGKRLDYIFFRQPAIAR 272


>gi|115351807|ref|YP_773646.1| endonuclease/exonuclease/phosphatase [Burkholderia ambifaria AMMD]
 gi|115281795|gb|ABI87312.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria AMMD]
          Length = 286

 Score = 53.6 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/304 (11%), Positives = 78/304 (25%), Gaps = 61/304 (20%)

Query: 4   VTVATWNV------NSI----R--ARIHNLAAWIKENNPDIICLQE-TKT--------ED 42
           + +  WNV      + +    R  A    L  +      D++C+QE T+           
Sbjct: 1   MRLIDWNVQWGRDADGVVDLARTIAAARRLGDF------DVLCMQEVTRGFGALPGQPGP 54

Query: 43  KNFPFET--------LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLD----- 89
             F             +++   +      +       +    + +   L           
Sbjct: 55  DQFTELAALLPGYTIFEAIGADLPPLEPDAARRQFGNAIATRLPVGRVLRQLLPWPADAS 114

Query: 90  ---VQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEE 146
              +    +E   T  +  LRI   +L   +        D +    R     + +    E
Sbjct: 115 GPSMPRVALEVELTTPSGALRIITTHLEFYSARQRLAQVDAMRARHREACAHADQPAPAE 174

Query: 147 PLIFAGDYNIIPQPHDCYNPIIWENDACFT----LEVRQSFQKLQNMGFTDAIRATHDTH 202
                       +            D+         +  +   +       A      T 
Sbjct: 175 NATGPFTATGQARDAIICGDFNSAFDSDAYRRLLEPIADAPSFVDAWVARHAGHTPPPTA 234

Query: 203 HLY--SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
            +Y  + W     +         D + ++      +    ID   R     SDH PV++ 
Sbjct: 235 GVYDTAQWSDGPLA--------CDFVFVTDTLLPRVTRCEIDGDVR----ASDHQPVVLE 282

Query: 261 LDIP 264
           +++ 
Sbjct: 283 VEVD 286


>gi|49479897|ref|YP_034699.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|196045232|ref|ZP_03112464.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus 03BB108]
 gi|218901573|ref|YP_002449407.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus AH820]
 gi|225862411|ref|YP_002747789.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus 03BB102]
 gi|228925624|ref|ZP_04088713.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|228931871|ref|ZP_04094767.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|229120029|ref|ZP_04249284.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus 95/8201]
 gi|229182756|ref|ZP_04309996.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BGSC 6E1]
 gi|49331453|gb|AAT62099.1| possible endonuclease/exonuclease/phosphatase family protein
           [Bacillus thuringiensis serovar konkukian str. 97-27]
 gi|196023816|gb|EDX62491.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus 03BB108]
 gi|218537236|gb|ACK89634.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus AH820]
 gi|225785970|gb|ACO26187.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus 03BB102]
 gi|228600729|gb|EEK58309.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BGSC 6E1]
 gi|228663495|gb|EEL19080.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus 95/8201]
 gi|228827851|gb|EEM73589.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|228834102|gb|EEM79650.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
          Length = 263

 Score = 53.6 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/271 (12%), Positives = 63/271 (23%), Gaps = 19/271 (7%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET------KTEDKNFPFETLQS 52
           + + T N +S +      +I  LA  I+E   D+I LQE       K    N   +    
Sbjct: 1   MKLLTLNCHSWQEENQIEKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGL 60

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           L              +     +   ++                +A F    +        
Sbjct: 61  LLLEELKALHVKDYNITWDFSHIGYDVYEEGLAIITKHNVVKEDAFFISENKDTTYWKTR 120

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                 I     +              +    ++        +         +       
Sbjct: 121 KIVSATIAYNGKNITFYSCHLGWWNDEEESFKDQVNRLMERVDSNELSFLMGDFNNNARL 180

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                E                           + WD           +RID I+ +   
Sbjct: 181 QGEGYEYMMQEGLYDTYELAIEKDEGTTVQGEIAGWD------ENKHNLRIDLILCNRS- 233

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              + S+++          SDH  V V +DI
Sbjct: 234 -EKIRSSKVVFNGTNRKVISDHFGVEVQVDI 263


>gi|305666477|ref|YP_003862764.1| putative exported phosphatase [Maribacter sp. HTCC2170]
 gi|88708744|gb|EAR00979.1| putative exported phosphatase [Maribacter sp. HTCC2170]
          Length = 545

 Score = 53.6 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 41/262 (15%), Positives = 78/262 (29%), Gaps = 31/262 (11%)

Query: 18  IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPI 77
           +  +   IK+  PD++ L ET    +        +L YH         + ++I+S++   
Sbjct: 298 VERVVQTIKQAQPDVVALIETYGSGEIIAD----ALGYHFY----LISSNLSIMSRFPIN 349

Query: 78  EIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF 137
           + +      +       +     +      +  L     N I      + +   ++  R 
Sbjct: 350 KTIKAFRPFNFGGAEINLGGGRRLTFLNTWLHYLPDYSKNVIEGAISAEDLINAEKETRQ 409

Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA 197
           +     L+E           P                  +E  +       + +  ++  
Sbjct: 410 SEVESILKEIKPLHSKSGSNPV---IMLGDFNSGSHLDWIESTKGIHNGYTIDWPVSLAM 466

Query: 198 THDTHHLYSF--------------WDYYADSWSKNKGI--RIDHIMLSPEATSLLHSARI 241
            +      SF              W   A + S   G+  RID+I         + S  I
Sbjct: 467 INAGFKD-SFRELNINPLLDPGLTWTPRAATSSNEYGLRDRIDYIYYKGGLIP-IESKVI 524

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
           D  P     PSDH  VI   D+
Sbjct: 525 DYHPL--MFPSDHAAVITVFDV 544


>gi|311109471|ref|YP_003982324.1| endonuclease/exonuclease/phosphatase family protein 2
           [Achromobacter xylosoxidans A8]
 gi|310764160|gb|ADP19609.1| endonuclease/exonuclease/phosphatase family protein 2
           [Achromobacter xylosoxidans A8]
          Length = 288

 Score = 53.6 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 41/299 (13%), Positives = 91/299 (30%), Gaps = 46/299 (15%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENN-------PDIICLQETK----------TEDK 43
           MS++ V ++N++  R+ +      + E         PD++ LQE +           + +
Sbjct: 1   MSLIRVVSYNIHKGRSALGR-RDSLNELRLGLYGLRPDLVFLQEVQGRNEQKSLLDAQHE 59

Query: 44  NFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
           +        + Y       ++ +G A+LS++  ++       D    Q   + A   +  
Sbjct: 60  SLAAALRLDVAYGRNAIRHETDHGNALLSRFPILDHENLDISDHRLEQRGLLHARIELGG 119

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI------- 156
           + +    ++L       S +       I+R +      L   +   +             
Sbjct: 120 RAVHCFVVHLGLFAGSRSRQILALTERIRRMVPDGEPILIAGDFNDWGDRLAPLFVQQLG 179

Query: 157 -----IPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYY 211
                   P      +    D+   L           +   +                  
Sbjct: 180 LYEVFSHAPRSHGGELPRLRDSVKRLSNALRGLPNGGVSVMERTNQLGMGD------SSR 233

Query: 212 -----ADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
                  ++       R+D I         + SAR+    R W + SDH+P++  L++P
Sbjct: 234 LLLPPPRTFPAVFPWFRLDRIY-QRGFA--VRSARVLRG-REWARLSDHSPLLAELELP 288


>gi|169342361|ref|ZP_02863427.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens C str. JGS1495]
 gi|169299481|gb|EDS81545.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens C str. JGS1495]
          Length = 262

 Score = 53.6 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 47/276 (17%), Positives = 79/276 (28%), Gaps = 28/276 (10%)

Query: 1   MSVVTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51
           M  + V T+N+         N    R   +   IK++ PDII  QE      +   + L 
Sbjct: 1   MRNLKVMTFNLKYDFKAQDNNEWSQRCLRITKLIKDHLPDIIGTQEGLIHMLDDMDDLLD 60

Query: 52  SLNY---HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108
             ++     E  G+  +N +  L     +                  +   ++     ++
Sbjct: 61  EYSWVGEDREGNGKDEFNAIFFLKNKFEVLEWNQFWLSKTPNIKGSKDFNSSLPRICTKL 120

Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL-EEPLIFAGDYNIIPQPHDCYNPI 167
                  G  I                      L+  ++         II    +CY   
Sbjct: 121 KLKDKISGLKIDIYNTHLDHESELAREEGIKIILKEVKKNYKIYKTPYIIMGDFNCYLED 180

Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227
              N           F    +    + +   H     Y              G  ID+I+
Sbjct: 181 NLFNIIREEETNNTCFNVCYDNIKNNILGTFHYFKGGY-------------DGKIIDYIL 227

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            S E    + S  ID +      PSDH PVI  L++
Sbjct: 228 YSKEYE--IKSLNIDDRKIDGGYPSDHYPVICELEL 261


>gi|148554832|ref|YP_001262414.1| endonuclease/exonuclease/phosphatase [Sphingomonas wittichii RW1]
 gi|148500022|gb|ABQ68276.1| Endonuclease/exonuclease/phosphatase [Sphingomonas wittichii RW1]
          Length = 230

 Score = 53.6 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/270 (12%), Positives = 68/270 (25%), Gaps = 50/270 (18%)

Query: 3   VVTVATWNVN-SI----RARIHNLAAWIKENNPDIICLQETK----TEDKNFPFETLQSL 53
           ++TVA++N+   +    R R   +   + E + DI+ LQE            P E +   
Sbjct: 1   MITVASYNIRKGLGTDRRRRPDRILDVLHEIHADIVALQEADRRFGARQSALPAELISQG 60

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
            Y       +                                 +    + + +R+  L  
Sbjct: 61  EYKAVPFDIRPGG------------------IGWHGNAILVRHSVEIGDYEPIRLPTLEP 102

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
                         +    R      + + +   L        +    D           
Sbjct: 103 RGA-----------VMAELRVGGNDLRVVGMHLDLSGLWRRRQVRAIIDHIRRRRHRMPT 151

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
               ++ +       +           T   Y              G  +D I+L+P+  
Sbjct: 152 VLMGDLNEWSLHGGCIREFAPELQIAPTGRSYH--SRRP------VGC-LDRIILTPDL- 201

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             L +  +    R     SDH P+   ++ 
Sbjct: 202 -HLVACGVHVSERARL-ASDHLPIWARVNW 229


>gi|330429974|gb|AEC21308.1| hypothetical protein PT7_2768 [Pusillimonas sp. T7-7]
          Length = 284

 Score = 53.6 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 48/298 (16%), Positives = 97/298 (32%), Gaps = 48/298 (16%)

Query: 1   MSVVTVATWNVNSIRAR---IHNLAAW---IKENNPDIICLQETKTEDKN---------F 45
           MSV+ V ++N++  R+      +L+     +   +PD++ LQE +  +           F
Sbjct: 1   MSVIRVVSYNIHKGRSATGGRESLSDLRLGLYGLHPDLLFLQEVQGRNDQRLSLDTQHEF 60

Query: 46  PFETLQ-SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
               L     Y        + +G A+LS+Y  +E       D    Q   + A   +   
Sbjct: 61  LAAALNMHAAYGCNAIRPHTDHGNALLSRYPILEHENQDISDHRLEQRGLLHALIEVQGV 120

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII------- 157
           ++    ++L       S +    +  IKR +      L   +   ++     +       
Sbjct: 121 SVHCLVVHLGLFAGGRSRQVAALVERIKRMVPEGEPMLIAGDFNDWSNRLAPLFVQQLGL 180

Query: 158 -----------PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYS 206
                      P P    + +    +    +        +  +G   A R T        
Sbjct: 181 YEVFAIAPHHDPGPRLLRHSVTRLRNTLRGVSPTPLAATVHELGINGAARMTPPPRT--- 237

Query: 207 FWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
               +  ++     +R+D I         +  AR+      W + SDH P+   L++P
Sbjct: 238 ----FPAAFP---WLRLDRIY-QRGFA--VRKARVLQGV-PWKQISDHAPLYAELELP 284


>gi|228963475|ref|ZP_04124632.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|228796169|gb|EEM43620.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar sotto str. T04001]
          Length = 263

 Score = 53.6 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/271 (12%), Positives = 63/271 (23%), Gaps = 19/271 (7%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET--KTEDKNFP----FETLQS 52
           + + T N +S +      +I  LA  I+E   D+I LQE     + +N       +    
Sbjct: 1   MKLLTLNCHSWQEENQIEKIQYLAKVIQEEEYDVIALQEVSQSIQAENVCGNKKKDNFGL 60

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           L              +     +   ++                +  F    +        
Sbjct: 61  LLLEELKALHVKDYNITWDFSHIGYDVYEEGLAIITKHNIIKEDTFFISENEDTTYWKTR 120

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                 I     D              +     +        +         +       
Sbjct: 121 KIVSTTIAYNGKDITFYSCHLGWWNDEEESFKGQFDRLMERVDSNKLAFLMGDFNNNARL 180

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                E                           + WD           +RID I+ +   
Sbjct: 181 EGEGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWD------ENKHSLRIDLILCNQS- 233

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              +HS+++          SDH  V V LDI
Sbjct: 234 -KKVHSSKVIFNGTNRNVISDHFGVEVQLDI 263


>gi|42779563|ref|NP_976810.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus ATCC 10987]
 gi|42735479|gb|AAS39418.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus ATCC 10987]
          Length = 263

 Score = 53.6 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/271 (12%), Positives = 62/271 (22%), Gaps = 19/271 (7%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET------KTEDKNFPFETLQS 52
           + + T N +S +      +I  LA  I+E   D+I LQE       K    N   +    
Sbjct: 1   MKLLTLNCHSWQEENQIEKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGL 60

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           L              +     +   ++                +  F    +        
Sbjct: 61  LLLEELKALYVKDYNITWDFSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTTYWKTR 120

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                 I     +              +    ++        +         +       
Sbjct: 121 KIVSATIAYNGKNITFYSCHLGWWNDEEESFKDQVNRLMERVDSNELSFLMGDFNNNARL 180

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                E                           + WD           +RID I+ +   
Sbjct: 181 QGEGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWD------ENKHNLRIDLILCNRS- 233

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              + S+++          SDH  V V +DI
Sbjct: 234 -EKVRSSKVIFNGTNRNVISDHFGVEVQVDI 263


>gi|196040092|ref|ZP_03107394.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus NVH0597-99]
 gi|196028947|gb|EDX67552.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus NVH0597-99]
          Length = 263

 Score = 53.6 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/271 (12%), Positives = 62/271 (22%), Gaps = 19/271 (7%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET------KTEDKNFPFETLQS 52
           + + T N +S +      +I  LA  I+E   D+I LQE       K    N   +    
Sbjct: 1   MKLLTLNCHSWQEENQIEKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGL 60

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           L              +     +   ++                +  F    +        
Sbjct: 61  LLLEELKALHVKDYNITWDFSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTTYWKTR 120

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                 I     +              +    ++        +         +       
Sbjct: 121 KIVSATIAYNGKNITFYSCHLGWWNDEEESFKDQVNRLMERVDSNELSFLMGDFNNNARL 180

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                E                           + WD           +RID I+ +   
Sbjct: 181 QGEGYEYMMQEGLYDTYELAIEKDEGTTVQGEIAGWD------ENKHNLRIDLILCNRS- 233

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              + S+++          SDH  V V +DI
Sbjct: 234 -EKIRSSKVVFNGTNRKIISDHFGVEVQVDI 263


>gi|301615392|ref|XP_002937163.1| PREDICTED: transposon TX1 uncharacterized 149 kDa protein-like
           [Xenopus (Silurana) tropicalis]
          Length = 1131

 Score = 53.6 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/263 (14%), Positives = 80/263 (30%), Gaps = 35/263 (13%)

Query: 1   MSVVTVATWNVN--SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           M+V T+++ NV     +A+   +  ++K    DI CLQE   +                 
Sbjct: 1   MAV-TISSLNVRCVGSKAKRAAVLDYLKSQKGDIFCLQECGLK----------------F 43

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
           +     +     +           +       + + +  +     + L +   Y      
Sbjct: 44  SPLASEWGEGESIWSPSAENRNVGVGVLVKGNKTKVLSYSVLEPGRLLLVNLKYFDISFR 103

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
           + +       +                 P++ AGD+N +    D    + +  D      
Sbjct: 104 LFNVYAPVDKNARVELFEKMMFNFPGRGPVVIAGDFNCVLSKEDREGNLDFSLDVS---- 159

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
            +     +Q+    DA  +  D +  +S++     S S     RID  ++S         
Sbjct: 160 SKMLSGIMQDFHLKDAFVSGGDVNDRFSWFSDAGVSKS-----RIDMFLIS-------SD 207

Query: 239 ARIDTKPRGWTKPSDHTPVIVSL 261
            +++         SDH  +   L
Sbjct: 208 IQVNKYVSFNNIFSDHRLLQCEL 230


>gi|284992406|ref|YP_003410960.1| endonuclease/exonuclease/phosphatase [Geodermatophilus obscurus DSM
           43160]
 gi|284065651|gb|ADB76589.1| Endonuclease/exonuclease/phosphatase [Geodermatophilus obscurus DSM
           43160]
          Length = 278

 Score = 53.6 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 43/272 (15%), Positives = 77/272 (28%), Gaps = 18/272 (6%)

Query: 4   VTVATWNVNSIR--ARIHN---LAAWIKENNPDIICLQETKTEDKNFPFETLQS-LNYHI 57
           + V TWN+   R  A       + A +    PD+  LQE     +    E L   L  H 
Sbjct: 7   LRVLTWNLW-WRFGAWQDRQTAIEAELAAARPDVCALQEVWIGPEGDQAELLAGRLGMHA 65

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
                 +            I     +       ++   E          R          
Sbjct: 66  VVAPSPAPGRWQRRLGDPAIGFANAVLSRWPITRSAVHELPAHPGEDGERTVLHAEIAAP 125

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
             T   +  ++            ++E     + A      P           ++D    L
Sbjct: 126 GGTVDVFTTQLDSAPDRSATRCAQVEEVVRFVAARAGTAHPPVVTGDLNAEPDSDEIRRL 185

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYY----ADSWSKNKGIRIDHIMLSPEAT 233
              ++   +      DA R        ++ WD      A ++  +   RID++++ P   
Sbjct: 186 CGHKTAPVVPGTVLVDAWRYAGPDEAGWT-WDRRNPHVAATFEPSA--RIDYVLVGPPTA 242

Query: 234 ---SLLHSAR-IDTKPRGWTKPSDHTPVIVSL 261
                +   R +  +P     PSDH  V+  L
Sbjct: 243 GGRGHVRGVRLVGDRPVDGVWPSDHCGVLAEL 274


>gi|261336121|dbj|BAI44754.1| pol-like protein [Alternaria alternata]
          Length = 1186

 Score = 53.6 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/281 (11%), Positives = 79/281 (28%), Gaps = 31/281 (11%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKE---NNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           S + +  +NV   R+R   +A+ +++   ++ DII +QE  T              +H+ 
Sbjct: 5   SRLNILQYNVR--RSRDMVMASLLRDPEIDDFDIIAIQEPWTNPYTATTHHPAKDRFHLC 62

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
                +     +               +    Q ++     T    ++ +          
Sbjct: 63  YPTGDAEGSARVC-----------FFINKRMDQTKWRFEEQTKYMCSVVVEPSNERQEEG 111

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
                        +R  R    +         A +  ++   +  +             E
Sbjct: 112 RLVIHNIYNPPRNRRDRRSTLPKAREALARHQAAEQILLGDFNLHHPLWGGLGRRETDPE 171

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
                  + +    + +          +F +    S        ID   ++      +  
Sbjct: 172 AEDLIDIIGDFALHNTLP-----PGTITFEEGRMQSA-------IDLCYVTTGLIDRIIK 219

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMK 279
           + +D   R     SDH P+  +LD+   R +++   +    
Sbjct: 220 SEVD---RNLDHDSDHLPISTALDLTVQRLEEKPRKAWKRL 257


>gi|301621930|ref|XP_002940297.1| PREDICTED: calcium/calmodulin-dependent 3',5'-cyclic nucleotide
           phosphodiesterase 1C-like [Xenopus (Silurana)
           tropicalis]
          Length = 1146

 Score = 53.6 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 43/268 (16%), Positives = 86/268 (32%), Gaps = 28/268 (10%)

Query: 5   TVATWNVNSIRARIH--NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           TVA++NVN +   +    +    K+    I+ LQE+  ++ + P  +L+  +Y       
Sbjct: 13  TVASYNVNGLNEPVKRAQIFGECKKAGYKIVMLQESHFKENHTPKISLK--HYPHIYLSN 70

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
                   +      ++        +D + RF+     +        N+Y+P+   I+  
Sbjct: 71  NPVKKATGVITMVHKDLPFKQIATLIDKEGRFVLLKCYLGELICTFANVYVPNQGQISFL 130

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +   K     +                     +                       +++ 
Sbjct: 131 RQFMKTLANFKQGLLVLGGDFNLVLNPLTDSSS--------------GKSNISYKGLKEV 176

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
            + L N    D  RA +     ++ +      +S     RID+I  S     L    +I 
Sbjct: 177 KKILSNAQIIDLWRAHNPKGRDFTHFSKTHSVYS-----RIDYIFASQYWLHLFAQTKI- 230

Query: 243 TKPRGWTKPSDHTPVIVSLDIPEPRKKQ 270
               G    SDH+P+     IP+  K +
Sbjct: 231 ----GTGILSDHSPISSKFIIPKTTKTE 254


>gi|164423689|ref|XP_961780.2| hypothetical protein NCU07891 [Neurospora crassa OR74A]
 gi|157070199|gb|EAA32544.2| predicted protein [Neurospora crassa OR74A]
          Length = 411

 Score = 53.6 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 47/357 (13%), Positives = 93/357 (26%), Gaps = 106/357 (29%)

Query: 5   TVATWNVNSIRARI---------------------------------------------- 18
            V +WN+N I A +                                              
Sbjct: 63  RVFSWNINGINAFLSSTPSARKITAYFTESTKTQKSGTSSTDAPPNASRPRTPPGQAPSG 122

Query: 19  --HNLAAWIKENN-PDIICLQETKTEDKNFPF---------ETLQSLNYHIETCGQKSYN 66
             H+L A++  +N P+I+ LQE K + ++ P          +      Y + T  +  + 
Sbjct: 123 SPHSLRAFLARHNWPEILFLQELKIKPQDGPALLPRDKHNAKAFGGKLYGVGTIMRTDFA 182

Query: 67  GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK--- 123
              + +  +    +           A   +      T+ L + N+Y  +G          
Sbjct: 183 RKWVATVREVDWDIEGRVSVVEMSGAPKGQDENEPVTKPLALINVYAVNGTTQPYRNPLT 242

Query: 124 --YDDKISWIKRFLRFASQRLELEEPLIFAGDYNII----------PQPHDCYNPIIWEN 171
                               L  E   + A  ++++          P           E 
Sbjct: 243 GAVHPNYPTRHDRKLVFHSLLRDECLSLEARGFSVVVAGDVNIARGPADGHPNLRTFPEQ 302

Query: 172 DACFTLEVRQSFQ------------------KLQNMGFTDAIRATHDTHHLYSFWDYYAD 213
                ++    F                     + +   D  RA +     Y+++    +
Sbjct: 303 HCLNRVDFNTKFFGEEDNKRAGGCVGSQDEKNKKCLDAVDVFRAKYGMEKRYTYYPNRGE 362

Query: 214 SWSKNKGI-----RIDHIMLSPEATS--LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                        R+D + +S E      +    I   P+    PSDH P  V + +
Sbjct: 363 -------WGSSCDRVDMVFVSKEVWDDGRVIDTGILDTPQ-ERGPSDHVPFWVKVAL 411


>gi|301052087|ref|YP_003790298.1| putative endonuclease/exonuclease/phosphatase family protein
           [Bacillus anthracis CI]
 gi|300374256|gb|ADK03160.1| possible endonuclease/exonuclease/phosphatase family protein
           [Bacillus cereus biovar anthracis str. CI]
          Length = 263

 Score = 53.6 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/271 (12%), Positives = 63/271 (23%), Gaps = 19/271 (7%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET------KTEDKNFPFETLQS 52
           + + T N +S +      +I  LA  I+E   D+I LQE       K    N   +    
Sbjct: 1   MKLLTLNCHSWQEENQIEKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGL 60

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           L              +     +   ++                +A F    +        
Sbjct: 61  LLLEELKALHVKDYNITWDFSHIGYDVYEEGLAIITKHNVVKEDAFFISENKDTTYWKTR 120

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                 I     +              +    ++        +         +       
Sbjct: 121 KIVSATIAYNGKNITFYSCHLGWWNDEEESFKDQVNRLVERVDSNELSFLMGDFNNNARL 180

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                E                           + WD           +RID I+ +   
Sbjct: 181 QGEGYEYMMQEGLYDTYELAIEKDEGTTVQGEIAGWD------ENKHNLRIDLILCNRS- 233

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              + S+++          SDH  V V +DI
Sbjct: 234 -EKIRSSKVVFNGTNRKVISDHFGVEVQVDI 263


>gi|38344432|emb|CAE05638.2| OSJNBa0038O10.4 [Oryza sativa Japonica Group]
          Length = 1045

 Score = 53.6 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 39/271 (14%), Positives = 78/271 (28%), Gaps = 34/271 (12%)

Query: 6   VATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
             +WNV  +   AR + +   + +   ++ CLQETK ++ +          Y ++    K
Sbjct: 7   FISWNVRGLNSPARCNTVHEMMLDTKCNLACLQETKLQNIDDGLARFLG-GYKLDIFAFK 65

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
              G               L    +   +   + T  +   T  +  +Y P  + +  + 
Sbjct: 66  PATGTRGGILILWNSATLVLQDIRISRFSISAQVTVPLTGATFLMTGVYGPTRHRLKDSF 125

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
                                 E  +  GD+NII +  D  N  +               
Sbjct: 126 LRHIRRLKP----------NAGEGWLLFGDFNIIYRARDKNNGNLNLARMRRFRATIDRC 175

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           +  +          +++       W              +D    +       H   +  
Sbjct: 176 ELHEIPLQNRRFTWSNERQ-----WPTLVK---------LDRCFCNENWDLAFHHHVLHA 221

Query: 244 KPRGWTKPSDHTPVIVSLDIPEPRKKQQDST 274
            P G   PSDH P++    +  P   ++  T
Sbjct: 222 LPTG---PSDHCPLV----LSNPAAPRKPRT 245


>gi|12957722|gb|AAK09240.1|AC084320_27 putative reverse transcriptase [Oryza sativa Japonica Group]
 gi|108711395|gb|ABF99190.1| retrotransposon protein, putative, LINE subclass [Oryza sativa
           Japonica Group]
          Length = 1135

 Score = 53.6 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/264 (12%), Positives = 80/264 (30%), Gaps = 33/264 (12%)

Query: 1   MSV---VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55
           MS+   +   +WNV  +   AR + +   + +   ++ CLQETK ++ +          Y
Sbjct: 102 MSMSHSLDFISWNVRVLNSPARCNTVHEMMLDTKCNLACLQETKLQNIDDGLTRFLG-GY 160

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
            +++   K   G               L    +       +    +   T  +  +Y P 
Sbjct: 161 KLDSFAFKPATGTRGGIIILWNNAALILQDIRIGRFLISAQVMVPLTGATFLMTGVYGPT 220

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
            + +                                    ++    +       +N+   
Sbjct: 221 RHRLKDAFLRHIRRLKPNAGEGW-----------------LLFGDFNMIYRARDKNNGNL 263

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            L   + F+   +      I   +     +++    ++   +   +++DH   +      
Sbjct: 264 NLARMRRFRATIDRCELREIPLQNK---RFTW----SNERQRPTLVKLDHCFCNENWDLA 316

Query: 236 LHSARIDTKPRGWTKPSDHTPVIV 259
            H   +   P G   PSDH P+++
Sbjct: 317 FHHHVLHALPTG---PSDHCPLVL 337


>gi|52144875|ref|YP_081954.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus E33L]
 gi|51978344|gb|AAU19894.1| possible endonuclease/exonuclease/phosphatase family protein
           [Bacillus cereus E33L]
          Length = 263

 Score = 53.6 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/271 (12%), Positives = 63/271 (23%), Gaps = 19/271 (7%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET------KTEDKNFPFETLQS 52
           + + T N +S +      +I  LA  I+E   D+I LQE       K    N   +    
Sbjct: 1   MKLLTLNCHSWQEENQIEKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKKDNFGL 60

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           L              +     +   ++                +A F    +        
Sbjct: 61  LLLEELKALHVKDYNITWDFSHIGYDVYEEGLAIITKHNVVKEDAFFISENKDTTYWKTR 120

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                 I     +              +    ++        +         +       
Sbjct: 121 KIVSATIAYNGKNITFYSCHLGWWNDEEESFKDQVNRLMERVDSNELSFLMGDFNNNARL 180

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                E                           + WD           +RID I+ +   
Sbjct: 181 QGEGYEYMMQEGLYDTYELAIEKDEGTTVQGEIAGWD------ENKHNLRIDLILCNRS- 233

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              + S+++          SDH  V V +DI
Sbjct: 234 -EKVRSSKVIFNGTNRNIISDHFGVEVQVDI 263


>gi|224542024|ref|ZP_03682563.1| hypothetical protein CATMIT_01197 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525081|gb|EEF94186.1| hypothetical protein CATMIT_01197 [Catenibacterium mitsuokai DSM
           15897]
          Length = 267

 Score = 53.6 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/276 (13%), Positives = 72/276 (26%), Gaps = 31/276 (11%)

Query: 4   VTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQET------KTEDKN---FPFET 49
           + + T N +S+     + ++  +A +I  ++ D+ICLQE       K+   +      + 
Sbjct: 1   MKLMTLNTHSLSESDEKNKLQTIANFILNHDVDVICLQEVNQSMTAKSVSTDSSYVGRDI 60

Query: 50  LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFI-EATFTINTQTLRI 108
           ++  NY +                 +                     E T    T     
Sbjct: 61  IKEDNYALGLSRLLGDQYNWNYIPVKVGYDKFDEGVAIFSKYPIVNSENTLLTQTNDYSF 120

Query: 109 GNLYLPHGNPI---TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165
                  G  +    +  +                  +  +    A     +    D   
Sbjct: 121 WKKRNSLGVELVKENTHFWVYTAHLGWWKDEEEPFINQWHKLKTIATKEVPVYLAGDFNA 180

Query: 166 PIIWENDACFTLEVRQSFQKLQ-NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRID 224
           P I  N +  T++    F              A          WD          G+RID
Sbjct: 181 PDIIPNQSYTTIKEDGWFDTRDLADDVQGRFTAQGKIDG----WD------EAVDGMRID 230

Query: 225 HIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
           +I  +      + S  +          SDH  + + 
Sbjct: 231 YIWCNK--KEHVKSHHVIFDGTHEDVVSDHFGLFME 264


>gi|170733178|ref|YP_001765125.1| endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia
           MC0-3]
 gi|169816420|gb|ACA91003.1| Endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia
           MC0-3]
          Length = 284

 Score = 53.6 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 41/301 (13%), Positives = 79/301 (26%), Gaps = 61/301 (20%)

Query: 4   VTVATWNVN-------SI---R--ARIHNLAAWIKENNPDIICLQE-TKTED-------- 42
           + +  WN+         +   R  A I  L  +      D++CLQE T+  D        
Sbjct: 1   MRLIDWNIQWGRDADGGVDLPRTVAAIRRLGDF------DVLCLQELTRGFDALPGRPGP 54

Query: 43  KNFPFETLQSLNYHIE-----------TCGQKSYNGVAILSKYQPIEIVTHLPGDD---- 87
             F         Y I                +   G AI ++     ++  L        
Sbjct: 55  DQFTELAALLPGYTIVDAIGADLPPIRPDAPRRQFGNAIATRLPVGRVLRQLLPWPADAG 114

Query: 88  -LDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEE 146
              +    ++        +LR+   +L + +        D +    R     + +    E
Sbjct: 115 TPSMPRVALDIELQAPFGSLRVVTTHLEYYSARQRLAQVDALRDRHREACAHADQPAPAE 174

Query: 147 PLIFAGDYNIIPQPHDCYNPIIWENDACFT----LEVRQSFQKLQNMGFTDAIRATHDTH 202
                      P+            D+         +  +   +              T 
Sbjct: 175 TPEGPFSATGQPRDAIVCGDFNSAFDSDAYRRFVEPIADAPSFVDAWIARHPGHTPPPTA 234

Query: 203 HLY--SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
            +Y  + W     +         D + ++      +    ID   R     SDH PV++ 
Sbjct: 235 GIYDTAQWSDGPLA--------CDFVFVTDTLLPRVIGCEIDGDVR----ASDHQPVLLE 282

Query: 261 L 261
           L
Sbjct: 283 L 283


>gi|147790112|emb|CAN61031.1| hypothetical protein VITISV_003970 [Vitis vinifera]
          Length = 299

 Score = 53.6 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 23/41 (56%), Gaps = 2/41 (4%)

Query: 4   VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTED 42
           + + TWNV      ++   +  +I+    D++C+QETK ++
Sbjct: 110 MKIITWNVRGANDSSKRKIIKNYIRNQRVDLMCIQETKIQE 150


>gi|160937934|ref|ZP_02085292.1| hypothetical protein CLOBOL_02828 [Clostridium bolteae ATCC
           BAA-613]
 gi|158439160|gb|EDP16914.1| hypothetical protein CLOBOL_02828 [Clostridium bolteae ATCC
           BAA-613]
          Length = 290

 Score = 53.6 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 47/294 (15%), Positives = 83/294 (28%), Gaps = 40/294 (13%)

Query: 4   VTVATWNVNSIR-----ARIHNLAAWIKENNPDIICLQETKTEDKNFPFE--TLQSLNYH 56
           + + T N +S+      +++   A  + +  PDII LQE        P     L+   Y 
Sbjct: 1   MKIMTLNTHSLAEPEYESKLAAFAGSLVQIKPDIIALQEVNQSRSAPPAASGWLRESGY- 59

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN----TQTLRIGNLY 112
              C  K  N V+  +    I    H     L +    +   +T         +    L 
Sbjct: 60  -VPCCAKDLNTVSPCASRAVIRADNHALNLALLLARAGVSYQWTWTPAKVGYGIYDEGLA 118

Query: 113 LPHGNPITSTKYDD----KISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168
           +   +PI  T        +     +  +        E    +    ++            
Sbjct: 119 VLSRSPILGTSQFYITGIRDYENWKTRKILGINTRTEYGNEYFYSVHMGWWNDSEEPFEG 178

Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY---SFWDYYADSWSKNKG----- 220
             N     L      +      F      T     L     ++D Y  + S++ G     
Sbjct: 179 QWNRISSGLSPLAEERLWLMGDFNSPAHITGQGRDLILASGWFDAYDLAASRDSGVTVAN 238

Query: 221 -------------IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
                        +RID+I  S      + S+R       +   SDH  +I   
Sbjct: 239 AIDGWREQGEIPGMRIDYIWTSRRVP--VISSRTIYDGTSFPVVSDHFGIITEY 290


>gi|149238650|ref|XP_001525201.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146450694|gb|EDK44950.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 547

 Score = 53.6 bits (127), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 45/314 (14%), Positives = 91/314 (28%), Gaps = 40/314 (12%)

Query: 3   VVTVATWNVNSIRA----RIHNLAAWIKEN--------NPDIICLQETKTED--KNFPFE 48
           ++ + T+N   ++     R H L A   E         + DI+ LQE   E+        
Sbjct: 105 LIKLLTFNTWGLKFVSKHRKHRLQAIADELANPKTVEDDYDIVALQEIWCEEDWDYLDRV 164

Query: 49  TLQSLNY-HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107
                 Y  +   G  +  G+AILSK   +E   +    +    A F    +   + ++ 
Sbjct: 165 CRNRYPYRRVFKSGIITGPGLAILSKQPIVETFLYRFPINGRSSAFFRGDWYVGKSISVT 224

Query: 108 IGN--------------LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGD 153
           I                          ++    +      F +      +    +I  GD
Sbjct: 225 IFQPHKEGSLPIALLNSHMHAPYGHGDASYSTHRACQAWDFAKLVRMLKKAGYAVIQVGD 284

Query: 154 YNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD 213
            N  P+        +          + +            +         + +      +
Sbjct: 285 LNSKPESLPYKIFTVEGGLTDSWNVLHKDDLMNAAELAKLSPEDQIALGGV-TCNS-RLN 342

Query: 214 SWSKNKGI----RIDHIMLSPE----ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           +W KN+ +    R+D+ ++        T+ +    I  KP      SDH    V   +  
Sbjct: 343 TWRKNRRLSEACRLDYALIDANNIVPVTAGVKFTGILPKP-WLCSYSDHFAYSVEFLVSS 401

Query: 266 PRKKQQDSTSQNMK 279
             + +      N+ 
Sbjct: 402 VDEHKSPQIDHNLL 415


>gi|255513505|gb|EET89771.1| Endonuclease/exonuclease/phosphatase [Candidatus Micrarchaeum
           acidiphilum ARMAN-2]
          Length = 256

 Score = 53.3 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/272 (10%), Positives = 65/272 (23%), Gaps = 29/272 (10%)

Query: 4   VTVATWNVNSIRARIHNLAAWI--KENNPDIICLQET-----------KTEDKNFPFETL 50
           + + + NV   R     LA ++  K+   DI C QE            K   +++     
Sbjct: 1   MRIVSLNVWGGRVYSK-LAEFLEGKKTGVDIFCFQEVLDANSKTGNEAKATKQSYQGTEF 59

Query: 51  QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
           +     ++    +  N +     +             + V+        T          
Sbjct: 60  EE----VQDLYGRLENVLTGFRGFLSASYSEGSEKLAMFVRNGIEADVRTAWAHKQIRVL 115

Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170
                    +  +Y    +            L          +     +          E
Sbjct: 116 YGGKPFEVGSIMQYAKISNDNGTCFIANVHGLWQGGGKEDTPERIEQSRNILRIMSSFGE 175

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230
                         +  +M   + +    +           +     +KG   D+I  S 
Sbjct: 176 RKILCGDFNLDISTESVHMLEQETVNLVKEFKIN----STRSALAPSSKGRFADYIFASD 231

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
           +    ++   +          SDH P+ V  +
Sbjct: 232 KI--KINKFNVLNDV-----VSDHLPLYVDFE 256


>gi|228899090|ref|ZP_04063362.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis IBL
           4222]
 gi|228860531|gb|EEN04919.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis IBL
           4222]
          Length = 263

 Score = 53.3 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/271 (12%), Positives = 63/271 (23%), Gaps = 19/271 (7%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET--KTEDKNFP----FETLQS 52
           + + T N +S +      +I  LA  I+E   D+I LQE     + +N       +    
Sbjct: 1   MKLLTLNCHSWQEENQIEKIQYLAKVIQEEEYDVIALQEVSQSIQAENVCGNKKEDNFGL 60

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           L              +     +   ++                +  F    +        
Sbjct: 61  LLLEELKALHVKDYNITWDFSHIGYDVYEEGLAIITKHNIIKEDTFFISENEDTTYWKTR 120

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                 +     D              +     +        +         +       
Sbjct: 121 KIVSTTLAYNGKDITFYSCHLGWWNDEEESFKGQVDRLMERVDSNKLAFLMGDFNNNARL 180

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                E                           + WD           +RID I+ +   
Sbjct: 181 KGEGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWD------ENKHSLRIDLILCNQS- 233

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              +HS+++          SDH  V V LDI
Sbjct: 234 -KKVHSSKVIFNGTNRNVISDHFGVEVQLDI 263


>gi|147821635|emb|CAN72477.1| hypothetical protein VITISV_022513 [Vitis vinifera]
          Length = 705

 Score = 53.3 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 22/40 (55%), Gaps = 2/40 (5%)

Query: 4   VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTE 41
           + + +WNV      ++   +  +I+    D+IC+QETK +
Sbjct: 330 MKILSWNVRGANDSSKRKVIKTFIRNQRVDVICIQETKIQ 369


>gi|254496441|ref|ZP_05109319.1| putative endonuclease/exonuclease/phosphatase family protein
           [Legionella drancourtii LLAP12]
 gi|254354337|gb|EET12994.1| putative endonuclease/exonuclease/phosphatase family protein
           [Legionella drancourtii LLAP12]
          Length = 242

 Score = 53.3 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 44/274 (16%), Positives = 85/274 (31%), Gaps = 47/274 (17%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKEN-NPDIICLQET------K--TEDKNFPFETLQSL- 53
           + + T N+     R   L  +I  + + DI CLQE       K   +DK         L 
Sbjct: 1   MKLITLNLWGGHLRNP-LLKFIHHHKDIDIFCLQEVYHNAHRKIAVDDKELSLNIFSDLQ 59

Query: 54  -----NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108
                +Y I     ++  G+A+L K     +               I    + N Q +  
Sbjct: 60  KLLPNHYAIFKPAVENVYGIAMLLKKNIEILSEGEINIHQKQHHPGIGENHSRNLQWVE- 118

Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168
                         +++++I  I       + R + + P      + I         P I
Sbjct: 119 -------------CEFNNQIYSILNVHGLWNGRGKKDTPDRINQSHRIRHFMDTINTPQI 165

Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
              D     + +      Q     D +   H      + +    + ++       D+I++
Sbjct: 166 LCGDFNLRPDTKSMHIIEQG---MDNLITRHKIRSTRTSYYKKEEKFA-------DYILI 215

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
           SPE         ++       + SDH P+ +  +
Sbjct: 216 SPEI-------SVNKFAVMNDEVSDHAPLYLDFN 242


>gi|162312263|ref|NP_596144.2| inositol phosphosphingolipid phospholipase C (predicted)
           [Schizosaccharomyces pombe 972h-]
 gi|20138888|sp|O74369|NSMA_SCHPO RecName: Full=Putative neutral sphingomyelinase
 gi|157310440|emb|CAB39367.2| inositol phosphosphingolipid phospholipase C (predicted)
           [Schizosaccharomyces pombe]
          Length = 424

 Score = 53.3 bits (126), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 41/292 (14%), Positives = 85/292 (29%), Gaps = 34/292 (11%)

Query: 4   VTVATWNVNSIR-------ARIHNLAAWIKENNPDIICLQETKTEDK--NFPFETLQSLN 54
           + V ++N   +R        R+  +   + + + DI+ LQE  +             +L 
Sbjct: 9   LRVLSFNCWGLRFVSKYRTERLKAVGEKLAKCDYDIVLLQEVWSIYDFQEIRNLVSCNLV 68

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           Y           G+A+ SK+  IE   +    +   QA +    +      +   +L  P
Sbjct: 69  YSRFFHSAAMGAGLAMFSKFPIIESSMNKYPLNGRPQAFWRGDWYVGKG--VATASLQHP 126

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
            G  I+         + K    +   RL     +       +                  
Sbjct: 127 SGRIISLFNTHLHAPYGKGADTYLCHRLSQAWYISKLLRAAVQRGHIVIAAGDFNIQPLS 186

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLY------------SFWDYYADSWSKNKGI- 221
              E+  S+  + +   +          + +            +  D   ++W +N    
Sbjct: 187 VPHEIITSYGLVNDAWLSVYPDQVEHPPNRFSMNDKELVEIAGTTCDSRLNTWRENISSK 246

Query: 222 --------RIDHIMLSPEA--TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                   R+D++  SP            ++  P+     SDH  +   L I
Sbjct: 247 DMDDFVAKRLDYVFHSPSTCEAKNAKVVFLERVPKLDCSYSDHFAIETVLSI 298


>gi|171915191|ref|ZP_02930661.1| Endonuclease/exonuclease/phosphatase [Verrucomicrobium spinosum DSM
           4136]
          Length = 331

 Score = 53.3 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 45/268 (16%), Positives = 81/268 (30%), Gaps = 44/268 (16%)

Query: 2   SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETK-TEDKNFPFETLQSLNYHIE 58
           S + +AT N+  +R   ++  L   +++  PD++ LQE      +  P   L+ L  H  
Sbjct: 100 STLEIATINL--LRRNQNHAALETLLRDRQPDVVVLQEVSPGWAEMLPR--LKDLYPHQW 155

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
               +  +    +      E V      +   +   + A F    Q + + N++ PH   
Sbjct: 156 LEYHRKGSWGLAILSRGAWEKVGLHKLGESGPKKLGMVAEFDFKGQPVSLLNVHAPHPTS 215

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
                    +    R      Q+      +I AGD+N  P      + +   +    +  
Sbjct: 216 AAEIADRHVMHEEIRLWSVQRQQ--EGRAVIVAGDFNCTPWAWLYKDFLYQTHLVDTSQG 273

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
                 +   +                                 IDH+ +S +       
Sbjct: 274 RLFEATRHVWLPDRIM----------------------------IDHVFVSSDWKVSGRE 305

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIPEP 266
                   G    SDH PV VSLD    
Sbjct: 306 V-------GPDFGSDHRPVFVSLDWDSS 326


>gi|327241370|gb|AEA40470.1| APEX nuclease 1 [Sus scrofa]
          Length = 51

 Score = 53.3 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)

Query: 2  SVVTVATWNVNSIRARI-HNLAAWIKENNPDIIC 34
          + + + +WNV+ +RA I      W+KE  PDI+ 
Sbjct: 13 ATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILA 46


>gi|254719412|ref|ZP_05181223.1| Endonuclease/exonuclease/phosphatase family protein [Brucella sp.
           83/13]
 gi|265984415|ref|ZP_06097150.1| endonuclease/exonuclease/phosphatase [Brucella sp. 83/13]
 gi|306839189|ref|ZP_07472006.1| Endonuclease/exonuclease/phosphatase family protein [Brucella sp.
           NF 2653]
 gi|264663007|gb|EEZ33268.1| endonuclease/exonuclease/phosphatase [Brucella sp. 83/13]
 gi|306405736|gb|EFM61998.1| Endonuclease/exonuclease/phosphatase family protein [Brucella sp.
           NF 2653]
          Length = 369

 Score = 53.3 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 42/309 (13%), Positives = 78/309 (25%), Gaps = 75/309 (24%)

Query: 25  IKENNPDIICLQETKTEDKNFPFETLQ--------SLNYHIETCGQKSYNGVAILSKYQP 76
           I E   DI+CLQE    D        +           Y  +     + +    ++    
Sbjct: 65  IAETRADILCLQEV---DNLAALNAFEYGYLFKMIGYGYRHKYLIDGNDSRGIDVAVMMR 121

Query: 77  IEIVTHLPG------------------------------DDLDVQARFIEATFTINTQTL 106
                  P                                D   +   +     I  + L
Sbjct: 122 DTTRDGQPIEVDEVTSHAHLTYSDFGLYQPELAELGIEPHDRIFKRDCLNVDLRIGGEPL 181

Query: 107 RIGNLYLPHGNPI----------TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI 156
            +   +L   +               +  +  +  +            E   +  GD+N 
Sbjct: 182 SLFVAHLKSMSGARNGLDGRTSSHPVRLAEARAVRRIIEEKFGIDRVAERRWLICGDFND 241

Query: 157 IPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS 216
             +            +    +E   +   L   GF   +         ++ +        
Sbjct: 242 YRERILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDRWTLYHTRGPLER 301

Query: 217 KNKGIRIDHIMLSPEATSLLHSA-------------------RIDTKPR-GWTKP--SDH 254
                ++D+IM SP   +    A                    +D  PR GW +P  SDH
Sbjct: 302 --HLCQLDYIMASPAFAAKNEHAVPDIIRRGQPWRTIFPPEQNVDRYPRTGWDRPKASDH 359

Query: 255 TPVIVSLDI 263
            PV V+L++
Sbjct: 360 CPVSVTLNM 368


>gi|320167979|gb|EFW44878.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 879

 Score = 53.3 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 45/290 (15%), Positives = 81/290 (27%), Gaps = 49/290 (16%)

Query: 2   SVVTVATWNVN------SIRARIH--NLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
             +TV T+NVN       I A      +A  I+ +  DI+CLQET    + F   +L+ +
Sbjct: 410 RKLTVLTYNVNWGFCRMGI-ASQKVVQIAHGIRTSGADIVCLQETHHGWEQFLRSSLRDI 468

Query: 54  NYHIETCGQKS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
             H+      +      ++ S      +  H   +    Q     + F      L +   
Sbjct: 469 YPHMIFRHHDTVLPESNSVSSAGGQGFLSVHPLHELWYEQPPVAGSFFPGWMVELVVEGQ 528

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
            +   N        +      R L   S     E    +     + P+P          N
Sbjct: 529 PVQVLNVHLRPPISNVHKPSFRALFQTSSIRRAELQFFYD---RMKPKPGSAIIVAGDFN 585

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
           +      V             D++                                    
Sbjct: 586 EGHDGAAVVWLKGGRGKEPLNDSLIEFQPKTI---------------------------- 617

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRK-KQQDSTSQNMKP 280
                 + R+ ++       SDH PV+    + E R    Q + ++  +P
Sbjct: 618 ---RALNCRVMSEY---ELLSDHIPVVAEFALLESRPGGTQPAEAEQTQP 661


>gi|206968110|ref|ZP_03229066.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus AH1134]
 gi|228950924|ref|ZP_04113045.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|229068121|ref|ZP_04201428.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus F65185]
 gi|229176958|ref|ZP_04304353.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus 172560W]
 gi|206737030|gb|EDZ54177.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus AH1134]
 gi|228606433|gb|EEK63859.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus 172560W]
 gi|228714935|gb|EEL66803.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus F65185]
 gi|228808651|gb|EEM55149.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
          Length = 263

 Score = 53.3 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 35/271 (12%), Positives = 63/271 (23%), Gaps = 19/271 (7%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET--KTEDKNFP----FETLQS 52
           + + T N +S +      +I  LA  I+E   D+I LQE     + +N       +    
Sbjct: 1   MKLLTLNCHSWQEENQIEKIQYLAKVIQEEEYDVIALQEVSQSIQAENVCGNKKEDNFGL 60

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           L              +     +   ++                +  F    +        
Sbjct: 61  LLLEELKALHVKDYNITWDFSHIGYDVYEEGLAIITKHNIIKEDTFFISENEDTTYWKTR 120

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                 I     D              +     +        +         +       
Sbjct: 121 KIVSTTIAYNGKDITFYSCHLGWWNDEEESFKGQVDRLMERVDSNKLAFLMGDFNNNARL 180

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                E                           + WD           +RID I+ +   
Sbjct: 181 EGEGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWD------ENKHNLRIDLILCNQS- 233

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              +HS+++          SDH  V V LDI
Sbjct: 234 -KKVHSSKVIFNGTNRNVISDHFGVEVQLDI 263


>gi|147804917|emb|CAN78049.1| hypothetical protein VITISV_015861 [Vitis vinifera]
          Length = 1600

 Score = 53.3 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 20/37 (54%), Gaps = 2/37 (5%)

Query: 5   TVATWNVNSIRARIHN--LAAWIKENNPDIICLQETK 39
            + +WN   + +R     +  ++   NPD++ LQETK
Sbjct: 705 KILSWNTRGLGSRKKRRTVRRFLSTQNPDVVMLQETK 741


>gi|291548571|emb|CBL24833.1| Metal-dependent hydrolase [Ruminococcus torques L2-14]
          Length = 284

 Score = 53.3 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/286 (9%), Positives = 77/286 (26%), Gaps = 30/286 (10%)

Query: 4   VTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQET--KTEDKNFPFETLQSL--- 53
           + + T N +S+       +       +    PD++ LQE          P   L      
Sbjct: 1   MKLMTLNTHSLVESSYEEKKEKFIETLIAEQPDVVALQEVNQTASAGIIPDVMLAGYKRC 60

Query: 54  -NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
            ++ +          V    + + +          +                 +R+    
Sbjct: 61  MDFGLPVREDNHAKEVVEALREKDVYYYWTWLSAKIGYGKYDEGMALLSKKPIMRVKQFL 120

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
           +   +   + K    +             + +              +  +     + + D
Sbjct: 121 ISQTDDYDNWKTRKILGMQTEGSDDIFFTVHMGWWNDEEEPLKKQWEKMEKLTKSLEKKD 180

Query: 173 ACFTLEVRQS---------FQKLQNMGFTDAIRATHDTHHLYS-------FWDYYADSWS 216
               L    +         ++ +   G+ D+           +       + D       
Sbjct: 181 RTIWLMGDFNSLDNVKQEGYELICESGWKDSYCLAEQKDSGVTVEEEIDGWRDGEGGGAV 240

Query: 217 KNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
           K+   R+D+I  + +    + S+++    + +   SDH  VI+ ++
Sbjct: 241 KDA-KRLDYIFCNTQ--KKVKSSKVVCNGKNYPVVSDHYGVIIEVE 283


>gi|153809025|ref|ZP_01961693.1| hypothetical protein BACCAC_03329 [Bacteroides caccae ATCC 43185]
 gi|149128358|gb|EDM19577.1| hypothetical protein BACCAC_03329 [Bacteroides caccae ATCC 43185]
          Length = 315

 Score = 53.3 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 45/294 (15%), Positives = 81/294 (27%), Gaps = 45/294 (15%)

Query: 2   SVVTVATWNV-----------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETL 50
           + +TVA++N+           N    R   +A  ++ ++ DI   QE          E L
Sbjct: 25  TSITVASYNLRNANGSDSAKGNGWGQRYPVIAKMVQYHDFDIFGTQECFIHQLKDMKEAL 84

Query: 51  QSLNY-HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
              +Y  +     K     + +        V       L          +      +   
Sbjct: 85  PGYDYIGVGRDDGKEKGEHSAIFYRTDKFDVIEKGDFWLSETPDVPSKGWDAVLPRICSW 144

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
             +           ++  +  I +  R  S  L  ++         +             
Sbjct: 145 GHFKCKDTGFEFLFFNLHMDHIGKKARVESAYLVQDKMKELGKGKELP----AILTGDFN 200

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
            +    + +   S   L +       R   +     +F D+  DS+++    RIDH+ +S
Sbjct: 201 VDQTHQSYDAFVSKGVLCDSYEKCDFRYATNG----TFNDFDPDSFTE---SRIDHVFVS 253

Query: 230 PEATSL--------------------LHSA--RIDTKPRGWTKPSDHTPVIVSL 261
           P                                ID K      PSDH PV V L
Sbjct: 254 PVFKVKRYGVLTDTYRSIRGNGGKKDATDCPEEIDIKAYQARTPSDHFPVKVEL 307


>gi|229077725|ref|ZP_04210355.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock4-2]
 gi|228705666|gb|EEL58022.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock4-2]
          Length = 263

 Score = 53.3 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 35/271 (12%), Positives = 63/271 (23%), Gaps = 19/271 (7%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET--KTEDKNFP----FETLQS 52
           + + T N +S +      +I  LA  I+E   D+I LQE     + +N       +    
Sbjct: 1   MKLLTLNCHSWQEENQIEKIQYLAKVIQEEEYDVIALQEVSQSIQAENVCGNKKEDNFGL 60

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           L              +     +   ++                +  F    +        
Sbjct: 61  LLLEELKALHVKDYNITWDLSHIGYDVYEEGLAIITKHNIIKEDTFFISKNEDTTYWKTR 120

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                 I     D              +     +        +         +       
Sbjct: 121 KIVSTTIAYNGKDITFYSCHLGWWNDEEESFKGQVDRLMERVDSNKLAFLMGDFNNNAWL 180

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                E                           + WD           +RID I+ +   
Sbjct: 181 EGEGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWD------ENKHNLRIDLILCNQS- 233

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              +HS+++          SDH  V V LDI
Sbjct: 234 -KKVHSSKVIFNGTNRNVISDHFGVEVQLDI 263


>gi|326678662|ref|XP_003201131.1| PREDICTED: transposon TX1 uncharacterized 149 kDa protein-like
           [Danio rerio]
          Length = 1326

 Score = 53.3 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 38/264 (14%), Positives = 72/264 (27%), Gaps = 28/264 (10%)

Query: 1   MSVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           M V  + T N+N  R       L  +IK    D+  +QE+ +++ N   E     ++  +
Sbjct: 1   MRVFNIGTLNLNGARDSQKRMCLFEFIKMKRLDVTFIQESHSDNLN---EINWKKDWDGQ 57

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
                       ++      +       +  V+ RF++        T+   N+Y P+   
Sbjct: 58  IFMSHLAYNSGGVAVLFSKTVSPLSVETEEIVKGRFLKVKVKFEHATMVFLNIYAPNKGA 117

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
                       I          L  +         +         +    +N       
Sbjct: 118 ERIIFLKKFCDVINNVDSEDLLFLGGDFNCTENDKMDRNNLEPHNASQKEMKNLVQVCD- 176

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLH 237
                         D  R  H     Y++      S      + R+D   +     + + 
Sbjct: 177 ------------LCDVWRNVHLNDRQYTW----VHSKDNQISMARLDRFYMFKFQINYVK 220

Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261
             RI          SDH  VI  +
Sbjct: 221 DCRIIP-----VLFSDHCAVICKI 239


>gi|166710547|ref|ZP_02241754.1| hypothetical protein Xoryp_03535 [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 288

 Score = 53.3 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/271 (12%), Positives = 64/271 (23%), Gaps = 26/271 (9%)

Query: 4   VTVATWNV------NS---IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           + V ++NV      +       R  ++ A IK+ +PD+   QE   E   +    L +  
Sbjct: 35  LRVMSFNVRVPVDSDGDKRWTVRRTSMVALIKQTHPDVFGTQELVQEQAQYLASHLPAYR 94

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           +  +       +    +        V       L        ++         +      
Sbjct: 95  WFGKGRRADGSDEHMGVFYDSNALSVIESGDFWLSETPEVPGSSSWNTDLPRMVTWALFE 154

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
             N                  R   +        +       +P          + +D  
Sbjct: 155 RRNDTRRFYL----LNTHLPHRDQDEAAREHGARVILSRIATLPADIPVVVTGDFNSDPD 210

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
                  +             +    T   ++               RID I+     T 
Sbjct: 211 QGTYRTLTAVLGDARAHVAKPQGPEKTFQDFTTQPTR----------RIDWILF-RGLTP 259

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
                       G   PSDH PV+   + P+
Sbjct: 260 --TRFSTLDARPGGILPSDHYPVLAEFEWPQ 288


>gi|30018623|ref|NP_830254.1| exodeoxyribonuclease III [Bacillus cereus ATCC 14579]
 gi|218231797|ref|YP_002365209.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus B4264]
 gi|228956830|ref|ZP_04118615.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|229042269|ref|ZP_04190021.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH676]
 gi|229125865|ref|ZP_04254890.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-Cer4]
 gi|229143158|ref|ZP_04271590.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST24]
 gi|296501195|ref|YP_003662895.1| exodeoxyribonuclease III [Bacillus thuringiensis BMB171]
 gi|29894164|gb|AAP07455.1| Exodeoxyribonuclease III [Bacillus cereus ATCC 14579]
 gi|218159754|gb|ACK59746.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus B4264]
 gi|228640239|gb|EEK96637.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST24]
 gi|228657523|gb|EEL13336.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-Cer4]
 gi|228727060|gb|EEL78265.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH676]
 gi|228802871|gb|EEM49704.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|296322247|gb|ADH05175.1| exodeoxyribonuclease III [Bacillus thuringiensis BMB171]
          Length = 263

 Score = 53.3 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 35/271 (12%), Positives = 63/271 (23%), Gaps = 19/271 (7%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET--KTEDKNFP----FETLQS 52
           + + T N +S +      +I  LA  I+E   D+I LQE     + +N       +    
Sbjct: 1   MKLLTLNCHSWQEENQIEKIQYLAKVIQEEEYDVIALQEVSQSIQAENVCGNKKKDNFGL 60

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           L              +     +   ++                +  F    +        
Sbjct: 61  LLLEELKALHVKDYNITWDFSHIGYDVYEEGLAIITKHNIIKEDTFFISENEDTTYWKTR 120

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                 I     D              +     +        +         +       
Sbjct: 121 KIVSTTIAYNGKDITFYSCHLGWWNDEEESFKGQVDRLMERVDSNKLAFLMGDFNNNARL 180

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                E                           + WD           +RID I+ +   
Sbjct: 181 KGEGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWD------ENKHNLRIDLILCNQS- 233

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              +HS+++          SDH  V V LDI
Sbjct: 234 -KKVHSSKVIFNGTNRNVISDHFGVEVQLDI 263


>gi|188591189|ref|YP_001795789.1| metal dependent endonuclease/phosphatase [Cupriavidus taiwanensis
           LMG 19424]
 gi|170938083|emb|CAP63067.1| putative metal dependent endonuclease/phosphatase [Cupriavidus
           taiwanensis LMG 19424]
          Length = 260

 Score = 53.3 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/270 (13%), Positives = 72/270 (26%), Gaps = 42/270 (15%)

Query: 4   VTVATWNVN----SI--RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57
           + V T+N++     I  R RI N+ A +   + DI+ LQE +  +       L       
Sbjct: 3   LRVVTYNIHKGVTGIARRPRIQNVRAGLHAMDADIVFLQEVQDRNDRLVAAAL------- 55

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
               + +         Y       +   D        +     + ++ L I +       
Sbjct: 56  -FDPEHTQLNYLATDAYPHSVYGRNAVYDYGHHGNAILSRHPILMSENLDISDHRFEQRG 114

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDY--NIIPQPHDCYNPIIWENDACF 175
            + +      +      + F               +   N++P          + ND   
Sbjct: 115 LLHAVADVHGVETHLICVHFGLFARSRARQAEALVERVKNVVPADVPLVIAGDF-NDWNH 173

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            L+ +                  H       +W              +D I +       
Sbjct: 174 RLDAQICNTLGAVEASHARGARLHTFPSHMPWWQ-------------LDRIYV------- 213

Query: 236 LHSARIDTKP----RGWTKPSDHTPVIVSL 261
                I+       R W + SDH P++  L
Sbjct: 214 -RGYEIERAHALTGRDWAQRSDHVPLVAEL 242


>gi|119626446|gb|EAX06041.1| hCG1777785 [Homo sapiens]
          Length = 282

 Score = 53.3 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 34/92 (36%), Gaps = 12/92 (13%)

Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR 246
                 D  R  H     Y+F+     ++SK     IDHI+ S    S      I T   
Sbjct: 75  HQADLIDIYRTLHPISTEYTFFSAPHHTYSK-----IDHILGSKALLSKCKRTEIITNCL 129

Query: 247 GWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278
                SDH+ +   L++   +  Q  ST+  +
Sbjct: 130 -----SDHSAI--KLELRMKKLTQNRSTTWKL 154


>gi|75759165|ref|ZP_00739268.1| Endonuclease/Exonuclease/phosphatase family protein [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|74493327|gb|EAO56440.1| Endonuclease/Exonuclease/phosphatase family protein [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
          Length = 267

 Score = 53.3 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 34/273 (12%), Positives = 64/273 (23%), Gaps = 19/273 (6%)

Query: 2   SVVTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET--KTEDKNFP----FETL 50
           + + + T N +S +      +I  LA  I+E   D+I LQE     + +N       +  
Sbjct: 3   NNMKLLTLNCHSWQEENQIEKIQYLAKVIQEEEYDVIALQEVSQSIQAENVCGNKKEDNF 62

Query: 51  QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
             L              +     +   ++                +  F    +      
Sbjct: 63  GLLLLEELKALHVKDYNITWDFSHIGYDVYEEGLAIITKHNIIKEDTFFISENEDTTYWK 122

Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170
                   +     D              +     +        +         +     
Sbjct: 123 TRKIVSTTLAYNGKDITFYSCHLGWWNDEEESFKGQVDRLMERVDSNKLAFLMGDFNNNA 182

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230
                  E                           + WD           +RID I+ + 
Sbjct: 183 RLKGEGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWD------ENKHSLRIDLILCNQ 236

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                +HS+++          SDH  V V LDI
Sbjct: 237 S--KKVHSSKVIFNGTNRNVISDHFGVEVQLDI 267


>gi|47567194|ref|ZP_00237908.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus G9241]
 gi|47556037|gb|EAL14374.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus G9241]
          Length = 263

 Score = 53.3 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/271 (12%), Positives = 61/271 (22%), Gaps = 19/271 (7%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET------KTEDKNFPFETLQS 52
           + + T N +S +      +I  LA  I+E   D+I LQE       K    N   +    
Sbjct: 1   MKLLTLNCHSWQEENQIEKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGL 60

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           L              +     +   ++                +  F    +        
Sbjct: 61  LLLEELKALHVKDYNITWDFSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTTYWKTR 120

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                 I     +              +     +        +         +       
Sbjct: 121 KIVSATIAYNGKNITFYSCHLGWWNDEEESFKGQVNRLMEHVDSNEISFLMGDFNNNARL 180

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                E                           + WD           +RID I+ +   
Sbjct: 181 QGEGYEYMMQKGLHDTYELAIEKDEGTTVQGEIAGWD------ENKHNLRIDLILCNRS- 233

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              + S+++          SDH  V V +DI
Sbjct: 234 -EKVRSSKVIFNGTNRNIISDHFGVEVQVDI 263


>gi|182415509|ref|YP_001820575.1| endonuclease/exonuclease/phosphatase [Opitutus terrae PB90-1]
 gi|177842723|gb|ACB76975.1| Endonuclease/exonuclease/phosphatase [Opitutus terrae PB90-1]
          Length = 298

 Score = 53.3 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 38/274 (13%), Positives = 78/274 (28%), Gaps = 38/274 (13%)

Query: 4   VTVATWNVNSIR-----------ARIHNLAAWIKENNPDIICLQE-TKTEDKNFPFETLQ 51
           + V ++N   +R            R   +   I++  PD+I  QE   T+ ++   +   
Sbjct: 43  LRVMSFN---LRFASPQPPHAWPERRPIMQHVIEQTAPDLIGTQEGLYTQLRDLAADLPA 99

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
              Y     G++  +    ++ +   E    +  D   +                R    
Sbjct: 100 ---YEWIGLGREGGSRGEFMAVFYRRERFEPVAFDHFWLSDTPDVIGSMTWGNNYRRMVT 156

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP----QPHDCYNPI 167
           ++      +  ++    +     +  A Q+  +      A     +P       +C    
Sbjct: 157 WVRFRERASGREFYFWNTHFDHEVETARQKAAILIRDRLAQLDASVPLLLVGDFNCAAGN 216

Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227
               +                    +     H+                ++ G+RID I+
Sbjct: 217 SPAYETLTREAGLTDTWTAATARVNEGFNTFHNYEP------------PRHDGVRIDWIL 264

Query: 228 L-SPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
             +P A      A I T       PSDH PV+  
Sbjct: 265 ARTPSAVPR---AEIVTYRENGQTPSDHFPVLAD 295


>gi|325529413|gb|EGD06334.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. TJI49]
          Length = 269

 Score = 53.3 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/249 (12%), Positives = 62/249 (24%), Gaps = 21/249 (8%)

Query: 24  WIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ-----KSYNGVAILSKYQPIE 78
            I    PD+  +QE K  D N     L      +   G      ++   VAI  +     
Sbjct: 29  LIDALRPDVFLMQEAKGLDAN-GHARLHEWERRLSMRGFLGVAPRTGQNVAIFIRAPLRA 87

Query: 79  IVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFA 138
           +   +           ++         +   + +L    P         ++ +       
Sbjct: 88  LSFEVDNTHFHHAMAMLKVEVPGGAAPITFVSTHLCPNGPQIRQAEAAYLTALAAPDALT 147

Query: 139 SQRLELEEPLIF----AGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQ-NMGFTD 193
               +           A    + P     Y            +    +   +        
Sbjct: 148 LIGGDFNSASPHDPEPADWGGLAPHHRARYLAEDLSGIDRSVIARLDAAGLVDLGRRLHG 207

Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253
           +   T           Y    ++    +R D++  S           +   P    + SD
Sbjct: 208 SGIPTVPAAG------YREAEFAT---MRCDYLFASKALVERARRYEVLRTP-ETERASD 257

Query: 254 HTPVIVSLD 262
           H PV++ LD
Sbjct: 258 HYPVLLQLD 266


>gi|188575171|ref|YP_001912100.1| endonuclease/exonuclease/phosphatase family [Xanthomonas oryzae pv.
           oryzae PXO99A]
 gi|188519623|gb|ACD57568.1| endonuclease/exonuclease/phosphatase family [Xanthomonas oryzae pv.
           oryzae PXO99A]
          Length = 319

 Score = 53.3 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/271 (12%), Positives = 64/271 (23%), Gaps = 26/271 (9%)

Query: 4   VTVATWNV------NS---IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           + V ++NV      +       R  ++ A IK+ +PD+   QE   E   +    L +  
Sbjct: 66  LRVMSFNVRVPMDSDGDKRWTVRRTSMVALIKQAHPDVFGTQELVPEQAQYLASHLPAYR 125

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           +  +       +    +        V       L        ++         +      
Sbjct: 126 WFGKGRRADGSDEHMGVFYDSNALSVIESGDFWLSETPEVPGSSSWNTDLPRMVTWALFE 185

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
             N                  R   +        +       +P          + +D  
Sbjct: 186 RRNDKRRFYL----LNTHLPHRDQDEAAREHGARVILSRIATLPADIPVVVTGDFNSDPD 241

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
                  +             +    T   ++               RID I+     T 
Sbjct: 242 QGTYRTLTAVLGDARAHVAKPQGPEKTFQNFTTQPTR----------RIDWILF-RGLTP 290

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
                       G   PSDH PV+   + P+
Sbjct: 291 --TRFSTLDARPGGILPSDHYPVLAEFEWPQ 319


>gi|163761164|ref|ZP_02168241.1| Endonuclease/exonuclease/phosphatase [Hoeflea phototrophica DFL-43]
 gi|162281715|gb|EDQ32009.1| Endonuclease/exonuclease/phosphatase [Hoeflea phototrophica DFL-43]
          Length = 346

 Score = 53.3 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/306 (9%), Positives = 69/306 (22%), Gaps = 60/306 (19%)

Query: 17  RIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75
              N +   + E N D+I LQE  ++D+           Y               +    
Sbjct: 37  AKKNWIITLLSEMNADVIGLQEVVSQDELKALLAANGYPYFYCPVAPAFDADDPEIYVNA 96

Query: 76  PIEI-VTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRF 134
            + I   +       +         T+  +  R     +     +             + 
Sbjct: 97  TVAIASRYPFISAEPLSGVAGVPQDTVIDEDFRFSRTPVDAVIDLPGIGQTRFFVCHFKS 156

Query: 135 LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDA 194
                    ++    +                      A     + + F++  +      
Sbjct: 157 QGAFVDDEIIDGLADWGDKIRTTYMERAMAGVNQVAKRAAEAGAIYRMFRQSIDADADAP 216

Query: 195 IRATHD---------------THHLYSFWDYYAD------SWSKNK-------------- 219
           +    D                  ++S+    A+      ++ K+               
Sbjct: 217 VILLGDLNEDPASHTISILTQADRVWSWGSVAANGIPDPFAFLKHVYKLYDAFNLVPMQG 276

Query: 220 ------------GIRIDHIMLSPEATSL-------LHSARIDTKPRG----WTKPSDHTP 256
                       G  +D++++S             +    +            + SDH P
Sbjct: 277 FVRPNTHGGVGSGSTLDYVVVSNGLNPKNPRRRGEVAKVEVYDDHFAAGLPKDRSSDHAP 336

Query: 257 VIVSLD 262
           VI ++ 
Sbjct: 337 VIATIK 342


>gi|110633851|ref|YP_674059.1| endonuclease/exonuclease/phosphatase [Mesorhizobium sp. BNC1]
 gi|110284835|gb|ABG62894.1| Endonuclease/exonuclease/phosphatase [Chelativorans sp. BNC1]
          Length = 370

 Score = 53.3 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 41/309 (13%), Positives = 74/309 (23%), Gaps = 75/309 (24%)

Query: 25  IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLP 84
           I     DI+CLQE    D        +   Y +       Y      +      I   + 
Sbjct: 66  IAATRADILCLQEV---DNQAALNAFE-YGY-LHKMIGAGYREKYSSAGNDARGIDVAIM 120

Query: 85  GDDLDVQARFIEATFTINTQTLRIGNLYLPH------GNPITSTKYDDKISWIKRFLRFA 138
                     IE         +   +  L        G       +      +   +   
Sbjct: 121 MRRQTADGEPIEFRRMTTHAHITFDDFNLYTPELAELGLGPNERIFRRDCLEVDVLVGGK 180

Query: 139 SQRLELEEPLIFA-------GDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191
              + +              G    +P      + +       F  E     + +     
Sbjct: 181 PLTIYIVHFKAMNSVRNGRDGRLGSMPIRIAEASAVRRIILDRFGPEGTARKRWMICGDL 240

Query: 192 TDAIRATHDTHHLYSFWDYYA-------------DSWSKNKGIR---------------- 222
            D           ++ +D+                 + +N   R                
Sbjct: 241 NDYRERVLIEGEAHTGYDFRPVREAQSSVNVLTDGGFCENVVERRPELDRWTLYHTRGPE 300

Query: 223 ------IDHIMLSPEATSL--------LHSA-----------RIDTKPR-GWTKP--SDH 254
                 +D+I+LSP             + +             ++  PR GW +P  SDH
Sbjct: 301 ERHLCQLDYILLSPALAQKNGKVMPDIVRNGQPWRTIFPPGQEVERYPRTGWDRPKASDH 360

Query: 255 TPVIVSLDI 263
            PV +SLD+
Sbjct: 361 CPVAISLDL 369


>gi|195620344|gb|ACG32002.1| hypothetical protein [Zea mays]
          Length = 207

 Score = 53.3 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 4/41 (9%)

Query: 5  TVATWNVNSIRARIH----NLAAWIKENNPDIICLQETKTE 41
             TWN NS+  R+       +  +   +PD+IC+QE +  
Sbjct: 52 KFLTWNANSLLLRMKSDWPAFSQLVARLDPDVICVQEVRMP 92


>gi|194699264|gb|ACF83716.1| unknown [Zea mays]
          Length = 166

 Score = 53.3 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 4/41 (9%)

Query: 5  TVATWNVNSIRARIH----NLAAWIKENNPDIICLQETKTE 41
             TWN NS+  R+       +  +   +PD+IC+QE +  
Sbjct: 52 KFLTWNANSLLLRMKSDWPAFSQLVARLDPDVICVQEVRMP 92


>gi|167762675|ref|ZP_02434802.1| hypothetical protein BACSTE_01033 [Bacteroides stercoris ATCC
           43183]
 gi|167699015|gb|EDS15594.1| hypothetical protein BACSTE_01033 [Bacteroides stercoris ATCC
           43183]
          Length = 370

 Score = 53.3 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 44/266 (16%), Positives = 83/266 (31%), Gaps = 25/266 (9%)

Query: 4   VTVATWNV----NSIRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           +TVAT+NV    N I       +A ++++ + D++C QE   E+K+F  ++L+    H +
Sbjct: 114 LTVATYNVHNFGNEITGYSCKQIAKYMQQQHVDVLCFQEF-GENKHFTADSLRRALSHWQ 172

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIE---ATFTINTQTLRIGNLYLPH 115
                + + +  +           + G  +               +NT T+R+ N +L  
Sbjct: 173 YAIIPADDSIRGILPIAVFSRYPLIGGRFITYPHSANCSMLCDIILNTDTIRLLNNHLQT 232

Query: 116 ---GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                     + +      +R  +      E          +                  
Sbjct: 233 TSVSQNRKKWERELAADNTRREAQAVQDAAETLHENFVKRAFQTDSICQLATASPHPVLV 292

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                 +  S+   +          T    ++Y+   Y          +RID+   SPE 
Sbjct: 293 CGDFNSLPSSYTYHRFSESLKDGFKTGGHGYMYT---YRYGKRM----LRIDYAFHSPEL 345

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVI 258
                    D         SDH PVI
Sbjct: 346 ECT------DYYSPNLDLCSDHNPVI 365


>gi|172065587|ref|YP_001816299.1| endonuclease/exonuclease/phosphatase [Burkholderia ambifaria
           MC40-6]
 gi|171997829|gb|ACB68746.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria
           MC40-6]
          Length = 269

 Score = 53.3 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 43/262 (16%), Positives = 67/262 (25%), Gaps = 47/262 (17%)

Query: 4   VTVATWNVNS------IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57
           + +AT+N+         RA  H +A  I E + D+I LQE               L    
Sbjct: 29  LRIATYNIRGGYGKWHTRAA-HRIAQVIHELDADVIALQEV-------------PLGGTH 74

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
                        +       I T        V +R           +            
Sbjct: 75  APDVLAHLRDATGMHAVAGPTIDTPERRYGNAVLSRCPIRAARTLDLSFH---------Q 125

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
                  D  I      +R  +  L L      A    ++        P+I   D     
Sbjct: 126 REPRGALDADIDCSAGMIRVVATHLGLSASERSAQVQRLLAAFDTGAMPVILMGDINEWF 185

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
              ++ Q L           T  T  LY  +              +D I + P     L 
Sbjct: 186 VRGRALQALVTRFRRAPAPRTFPT--LYPVFS-------------LDRIWIHPG--EWLV 228

Query: 238 SARIDTKPRGWTKPSDHTPVIV 259
              +    R   + SDH P++ 
Sbjct: 229 DVNVHRSMRAR-RASDHYPLVA 249


>gi|238594682|ref|XP_002393552.1| hypothetical protein MPER_06696 [Moniliophthora perniciosa FA553]
 gi|215461202|gb|EEB94482.1| hypothetical protein MPER_06696 [Moniliophthora perniciosa FA553]
          Length = 164

 Score = 53.3 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 23/87 (26%), Positives = 45/87 (51%), Gaps = 2/87 (2%)

Query: 3   VVTVATWNVNSI-RARIHNLAAWIKENNPDIICLQETKTEDKNF-PFETLQSLNYHIETC 60
            +  A WNV  +  ++      +++  +PDI+ L ETK  ++   P  + +  + +    
Sbjct: 69  TLRFACWNVCGLATSQKKGFKFYVEAEDPDILVLTETKMNNEPVDPSLSSRFPHRYWSIA 128

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDD 87
            +K Y+G A+LSK++P+ +   LPG  
Sbjct: 129 EKKGYSGTAVLSKHKPLSVDKTLPGHP 155


>gi|107029003|ref|YP_626098.1| endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia AU
           1054]
 gi|116689839|ref|YP_835462.1| endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia
           HI2424]
 gi|105898167|gb|ABF81125.1| Endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia AU
           1054]
 gi|116647928|gb|ABK08569.1| Endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia
           HI2424]
          Length = 284

 Score = 53.3 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 41/301 (13%), Positives = 80/301 (26%), Gaps = 61/301 (20%)

Query: 4   VTVATWNV------NSI----R--ARIHNLAAWIKENNPDIICLQE-TKTED-------- 42
           + +  WN+      + +    R  A I  L  +      D++CLQE T+  D        
Sbjct: 1   MRLIDWNIQWGRDADGVVDLPRTVAAIRRLGDF------DVLCLQELTRGFDALSGRPGP 54

Query: 43  KNFPFETLQSLNYHIE-----------TCGQKSYNGVAILSKYQPIEIVTHLPGDD---- 87
             F         Y I                +   G AI ++     ++           
Sbjct: 55  DQFAELAALLPGYTIVDAIGADLPAIRPGAPRRQFGNAIATRLPVGRVLRQSLPWPADAG 114

Query: 88  -LDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEE 146
              +    ++     +  +LR+   +L + +        D +    R     + R    E
Sbjct: 115 APSMPRVALDIELQASFGSLRVVTTHLEYYSARQRLAQVDALRDRHREACAHADRPAPAE 174

Query: 147 PLIFAGDYNIIPQPHDCYNPIIWENDACFT----LEVRQSFQKLQNMGFTDAIRATHDTH 202
                      P+            D+         +  +   +              T 
Sbjct: 175 TPEGPFSATGQPRDAIVCGDFNSAFDSDAYRRLLEPIADAPGFVDAWIARHPGHTPPPTA 234

Query: 203 HLY-S-FWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
            +Y +  W     +         D + ++      +    ID   R     SDH PV++ 
Sbjct: 235 GIYDTVQWSDGPLA--------CDFVFVTDTLLPRVIGCEIDGDVR----ASDHQPVLLE 282

Query: 261 L 261
           L
Sbjct: 283 L 283


>gi|326335303|ref|ZP_08201498.1| endonuclease/exonuclease/phosphatase [Capnocytophaga sp. oral taxon
           338 str. F0234]
 gi|325692574|gb|EGD34518.1| endonuclease/exonuclease/phosphatase [Capnocytophaga sp. oral taxon
           338 str. F0234]
          Length = 343

 Score = 53.3 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 46/265 (17%), Positives = 91/265 (34%), Gaps = 38/265 (14%)

Query: 6   VATWNVNSIR--------ARIHNLAAWIKENNPDIICLQE-TKTEDKNFPFETLQSLNYH 56
           + ++NV  +              + ++++E +P+I+ LQE  K E+++FPF       Y 
Sbjct: 104 IMSFNVRLLNHYKWSKDLTLREKIISFLREEHPNIVALQEFYKKENESFPF-------YK 156

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
            +    K+ N     +      I+     +        + A   +   TLR+ +L+    
Sbjct: 157 YKRFIYKNENDKIGQAILSDYPIIGSGSLNFPHTGNNGVYADIVLGKDTLRLYSLHFESF 216

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
             I  T+   + S            ++  +  +F    +  P P                
Sbjct: 217 -HIDDTQITQENSKKILLSLPKRFAIQQSQVELFDAHADTSPYPIIVCGDFNNT------ 269

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
                 +QK+QN G  D+ +          ++ Y+          RID+I   P     +
Sbjct: 270 -AFSYLYQKIQNRGLIDSFQEEGSGFGKTYYFPYFP--------FRIDYIFADPYF--KI 318

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSL 261
            S ++ T        SDH P+  + 
Sbjct: 319 TSHKVYTGI----NYSDHYPLKATF 339


>gi|229028217|ref|ZP_04184357.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1271]
 gi|228733091|gb|EEL83933.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1271]
          Length = 263

 Score = 53.3 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/271 (12%), Positives = 63/271 (23%), Gaps = 19/271 (7%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET--KTEDKNFP----FETLQS 52
           + + T N +S +      +I  LA  I+E + D+I LQE     + +N       +    
Sbjct: 1   MRLLTLNCHSWQEENQLEKIKYLAKVIQEEDYDVIALQEVSQSIQAENVCGHKKKDNFGL 60

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           L              +     +   ++                +  F    +        
Sbjct: 61  LLLEELKALHVKDYNITWDFSHIGYDVYEEGLAILTKHNVIKEDTFFVSENKDTTYWKTR 120

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                 I     +              +     +        N         +       
Sbjct: 121 KIVSATIAYNGKNITFYSCHLGWWNDEEESFKGQVDRLMERVNRDELSFLMGDFNNNARL 180

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                E                           + WD           +RID I+ +   
Sbjct: 181 QGEGYEYMMQKGLYDTYELAAEKDEGTTVQGEIAGWD------KNKHNLRIDLILCNQS- 233

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              + S+++          SDH  V V +DI
Sbjct: 234 -EKVRSSKVIFNDTNRNVISDHFGVEVQVDI 263


>gi|225852859|ref|YP_002733092.1| endonuclease/exonuclease/phosphatase [Brucella melitensis ATCC
           23457]
 gi|256263656|ref|ZP_05466188.1| endonuclease/exonuclease/phosphatase [Brucella melitensis bv. 2
           str. 63/9]
 gi|225641224|gb|ACO01138.1| Endonuclease/exonuclease/phosphatase [Brucella melitensis ATCC
           23457]
 gi|263093710|gb|EEZ17715.1| endonuclease/exonuclease/phosphatase [Brucella melitensis bv. 2
           str. 63/9]
 gi|326409399|gb|ADZ66464.1| endonuclease/exonuclease/phosphatase [Brucella melitensis M28]
          Length = 369

 Score = 53.3 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 42/309 (13%), Positives = 78/309 (25%), Gaps = 75/309 (24%)

Query: 25  IKENNPDIICLQETKTEDKNFPFETLQ--------SLNYHIETCGQKSYNGVAILSKYQP 76
           I E   DI+CLQE    D        +           Y  +     + +    ++    
Sbjct: 65  IAETRADILCLQEV---DNLAALNAFEYGYLFKMIGYGYRHKYLIDGNDSRGIDVAVMMR 121

Query: 77  IEIVTHLPG------------------------------DDLDVQARFIEATFTINTQTL 106
                  P                                D   +   +     I  + L
Sbjct: 122 DTTRDGQPIEVDEVTSHAHLTYSDFGIYQPELAELGLEPHDRIFKRDCLNVDLRIGGEPL 181

Query: 107 RIGNLYLPHGNPI----------TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI 156
            +   +L   +               +  +  +  +            E   +  GD+N 
Sbjct: 182 SLFVAHLKSMSGARNGQDGRASSHPVRLAEARAIRRIIEEKFGIDRVTERRWLICGDFND 241

Query: 157 IPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS 216
             +            +    +E   +   L   GF   +         ++ +        
Sbjct: 242 YRERILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDRWTLYHTRGPLER 301

Query: 217 KNKGIRIDHIMLSPEATSLLHSA-------------------RIDTKPR-GWTKP--SDH 254
                ++D+IM SP   +    A                    +D  PR GW +P  SDH
Sbjct: 302 --HLCQLDYIMASPAFAAKNEHAVPDIIRRGQPWRTIFPPEQNVDRYPRTGWDRPKASDH 359

Query: 255 TPVIVSLDI 263
            PV V+L++
Sbjct: 360 CPVSVTLNM 368


>gi|170701595|ref|ZP_02892542.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria
           IOP40-10]
 gi|170133507|gb|EDT01888.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria
           IOP40-10]
          Length = 269

 Score = 53.3 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 43/262 (16%), Positives = 67/262 (25%), Gaps = 47/262 (17%)

Query: 4   VTVATWNVNS------IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57
           + +AT+N+         RA  H +A  I E + D+I LQE               L    
Sbjct: 29  LRIATYNIRGGYGKWHTRAA-HRIAQVIHELDADVIALQEV-------------PLGGTH 74

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
                        +       I T        V +R           +            
Sbjct: 75  APDVLAHLRDATGMHAVAGPTIDTPERRYGNAVLSRCPIRAARTLDLSFH---------Q 125

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
                  D  I      +R  +  L L      A    ++        P+I   D     
Sbjct: 126 REPRGALDADIDCSAGMIRVVATHLGLSASERSAQVQRLLAAFDTGAMPVILMGDINEWF 185

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
              ++ Q L           T  T  LY  +              +D I + P     L 
Sbjct: 186 VRGRALQALVTRFRRAPAPRTFPT--LYPVFS-------------LDRIWIHPG--EWLV 228

Query: 238 SARIDTKPRGWTKPSDHTPVIV 259
              +    R   + SDH P++ 
Sbjct: 229 DVNVHRSMRAR-RASDHYPLVA 249


>gi|229188637|ref|ZP_04315676.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus ATCC 10876]
 gi|228594826|gb|EEK52606.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus ATCC 10876]
          Length = 263

 Score = 53.3 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 35/271 (12%), Positives = 63/271 (23%), Gaps = 19/271 (7%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET--KTEDKNFP----FETLQS 52
           + + T N +S +      +I  LA  I+E   D+I LQE     + +N       +    
Sbjct: 1   MKLLTLNCHSWQEENQIEKIQYLAKVIQEEEYDVIALQEVSQSIQAENVCGNKKEDNFGL 60

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           L              +     +   ++                +  F    +        
Sbjct: 61  LLLEELKALHVKDYNITWDFSHIGYDVYEEGLAIITKHNIIKEDTFFISENEDTTYWKTR 120

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                 I     D              +     +        +         +       
Sbjct: 121 KIVSATIAYNGKDITFYSCHLGWWNDEEESFEGQVDRLMERVDSNKLAFLMGDFNNNARL 180

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                E                           + WD           +RID I+ +   
Sbjct: 181 EGEGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWD------ENKHNLRIDLILCNQS- 233

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              +HS+++          SDH  V V LDI
Sbjct: 234 -KKVHSSKVIFNGTNRNVISDHFGVEVQLDI 263


>gi|62290271|ref|YP_222064.1| hypothetical protein BruAb1_1372 [Brucella abortus bv. 1 str.
           9-941]
 gi|82700193|ref|YP_414767.1| endonuclease/exonuclease/phosphatase family protein [Brucella
           melitensis biovar Abortus 2308]
 gi|189024505|ref|YP_001935273.1| Endonuclease/exonuclease/phosphatase family [Brucella abortus S19]
 gi|237815777|ref|ZP_04594774.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
 gi|254689573|ref|ZP_05152827.1| Endonuclease/exonuclease/phosphatase family protein [Brucella
           abortus bv. 6 str. 870]
 gi|254697714|ref|ZP_05159542.1| Endonuclease/exonuclease/phosphatase family protein [Brucella
           abortus bv. 2 str. 86/8/59]
 gi|254730604|ref|ZP_05189182.1| Endonuclease/exonuclease/phosphatase family protein [Brucella
           abortus bv. 4 str. 292]
 gi|256045007|ref|ZP_05447910.1| Endonuclease/exonuclease/phosphatase family protein [Brucella
           melitensis bv. 1 str. Rev.1]
 gi|256257822|ref|ZP_05463358.1| Endonuclease/exonuclease/phosphatase family protein [Brucella
           abortus bv. 9 str. C68]
 gi|256369791|ref|YP_003107302.1| Endonuclease/exonuclease/phosphatase family protein [Brucella
           microti CCM 4915]
 gi|260546815|ref|ZP_05822554.1| endonuclease/exonuclease/phosphatase family protein [Brucella
           abortus NCTC 8038]
 gi|260565390|ref|ZP_05835874.1| endonuclease/exonuclease/phosphatase family protein [Brucella
           melitensis bv. 1 str. 16M]
 gi|260755101|ref|ZP_05867449.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 6 str.
           870]
 gi|260758320|ref|ZP_05870668.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 4 str.
           292]
 gi|260762146|ref|ZP_05874489.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260884113|ref|ZP_05895727.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 9 str.
           C68]
 gi|265991436|ref|ZP_06103993.1| endonuclease/exonuclease/phosphatase [Brucella melitensis bv. 1
           str. Rev.1]
 gi|297248660|ref|ZP_06932378.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 5 str.
           B3196]
 gi|62196403|gb|AAX74703.1| hypothetical conserved protein [Brucella abortus bv. 1 str. 9-941]
 gi|82616294|emb|CAJ11351.1| Endonuclease/exonuclease/phosphatase family [Brucella melitensis
           biovar Abortus 2308]
 gi|189020077|gb|ACD72799.1| Endonuclease/exonuclease/phosphatase family [Brucella abortus S19]
 gi|237789075|gb|EEP63286.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
 gi|255999954|gb|ACU48353.1| Endonuclease/exonuclease/phosphatase family protein [Brucella
           microti CCM 4915]
 gi|260095865|gb|EEW79742.1| endonuclease/exonuclease/phosphatase family protein [Brucella
           abortus NCTC 8038]
 gi|260151458|gb|EEW86552.1| endonuclease/exonuclease/phosphatase family protein [Brucella
           melitensis bv. 1 str. 16M]
 gi|260668638|gb|EEX55578.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 4 str.
           292]
 gi|260672578|gb|EEX59399.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260675209|gb|EEX62030.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 6 str.
           870]
 gi|260873641|gb|EEX80710.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 9 str.
           C68]
 gi|263002220|gb|EEZ14795.1| endonuclease/exonuclease/phosphatase [Brucella melitensis bv. 1
           str. Rev.1]
 gi|297175829|gb|EFH35176.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 5 str.
           B3196]
          Length = 369

 Score = 53.3 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 42/309 (13%), Positives = 78/309 (25%), Gaps = 75/309 (24%)

Query: 25  IKENNPDIICLQETKTEDKNFPFETLQ--------SLNYHIETCGQKSYNGVAILSKYQP 76
           I E   DI+CLQE    D        +           Y  +     + +    ++    
Sbjct: 65  IAETRADILCLQEV---DNLAALNAFEYGYLFKMIGYGYRHKYLIDGNDSRGIDVAVMMR 121

Query: 77  IEIVTHLPG------------------------------DDLDVQARFIEATFTINTQTL 106
                  P                                D   +   +     I  + L
Sbjct: 122 DTTRDGQPIEVDEVTSHAHLTYSDFGIYQPELAELGLEPHDRIFKRDCLNVDLRIGGEPL 181

Query: 107 RIGNLYLPHGNPI----------TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI 156
            +   +L   +               +  +  +  +            E   +  GD+N 
Sbjct: 182 SLFVAHLKSMSGARNGQDGRTSSHPVRLAEARAIRRIIEEKFGIDRVTERRWLICGDFND 241

Query: 157 IPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS 216
             +            +    +E   +   L   GF   +         ++ +        
Sbjct: 242 YRERILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDRWTLYHTRGPLER 301

Query: 217 KNKGIRIDHIMLSPEATSLLHSA-------------------RIDTKPR-GWTKP--SDH 254
                ++D+IM SP   +    A                    +D  PR GW +P  SDH
Sbjct: 302 --HLCQLDYIMASPAFAAKNEHAVPDIIRRGQPWRTIFPPEQNVDRYPRTGWDRPKASDH 359

Query: 255 TPVIVSLDI 263
            PV V+L++
Sbjct: 360 CPVSVTLNM 368


>gi|229108038|ref|ZP_04237664.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock1-15]
 gi|228675438|gb|EEL30656.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock1-15]
          Length = 263

 Score = 53.3 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 35/271 (12%), Positives = 63/271 (23%), Gaps = 19/271 (7%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET--KTEDKNFP----FETLQS 52
           + + T N +S +      +I  LA  I+E   D+I LQE     + +N       +    
Sbjct: 1   MKLLTLNCHSWQEENQIEKIQYLAKVIQEEEYDVIALQEVSQSIQAENVCGNKKEDNFGL 60

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           L              +     +   ++                +  F    +        
Sbjct: 61  LLLEELKALHVKDYNITWDFSHIGYDVYEEGLAIITKHNIIKEDTFFISENEDTTYWKTR 120

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                 I     D              +     +        +         +       
Sbjct: 121 KIVSATIAYNGKDITFYSCHLGWWNDEEESFKGQVDRLMERVDSNKLAFLMGDFNNNARL 180

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                E                           + WD           +RID I+ +   
Sbjct: 181 KGEGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWD------ENKHNLRIDLILCNQS- 233

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              +HS+++          SDH  V V LDI
Sbjct: 234 -KKVHSSKVIFNGTNRNVISDHFGVEVQLDI 263


>gi|55379934|ref|YP_137784.1| hypothetical protein rrnAC3397 [Haloarcula marismortui ATCC 43049]
 gi|55232659|gb|AAV48078.1| unknown [Haloarcula marismortui ATCC 43049]
          Length = 277

 Score = 53.3 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 34/269 (12%), Positives = 66/269 (24%), Gaps = 18/269 (6%)

Query: 1   MSVVTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51
           M    V ++NV         +    R   +A  I+ +NPDII +QE            + 
Sbjct: 15  MKPTRVMSFNVRYDTAGDGVDGWPHRRRLVAGTIQYHNPDIIGVQE--AMAHQLRELEVL 72

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
              Y      ++S +     +              +    +       ++          
Sbjct: 73  LDGYEWVGDPRESVDAGGEHTAIGYRAERFDCAATNTFWLSEQPAEPSSVGWDAAYPRVA 132

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
                    +      ++         ++   +E  L      +                
Sbjct: 133 TWARLRDRDTDDDLLCLNTHLDHQGADARVEGIELVLDHLD--SATRDAPAVVMGDFNCV 190

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
                 E  +  +        D       TH   +      D       + IDH+ +S +
Sbjct: 191 VGEPAYERAEGHELPDGRRLVDTRNTATVTHGPTT---SRTDFHDLLPEMGIDHVFVSED 247

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
                 +   D         SDH PV+V 
Sbjct: 248 VAVDTRAVIADRD--DDHYGSDHLPVVVD 274


>gi|256061437|ref|ZP_05451581.1| Endonuclease/exonuclease/phosphatase family protein [Brucella
           neotomae 5K33]
 gi|261325444|ref|ZP_05964641.1| endonuclease/exonuclease/phosphatase [Brucella neotomae 5K33]
 gi|261301424|gb|EEY04921.1| endonuclease/exonuclease/phosphatase [Brucella neotomae 5K33]
          Length = 369

 Score = 53.3 bits (126), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 42/309 (13%), Positives = 78/309 (25%), Gaps = 75/309 (24%)

Query: 25  IKENNPDIICLQETKTEDKNFPFETLQ--------SLNYHIETCGQKSYNGVAILSKYQP 76
           I E   DI+CLQE    D        +           Y  +     + +    ++    
Sbjct: 65  IAETRADILCLQEV---DNLAALNAFEYGYLFKMIGYGYRHKYLIDGNDSRGIDVAVMMR 121

Query: 77  IEIVTHLPG------------------------------DDLDVQARFIEATFTINTQTL 106
                  P                                D   +   +     I  + L
Sbjct: 122 DTTRDGQPIEVDEVTSHAHLTYSDFGIYQPELAELGLEPHDRIFKRDCLNVDLRIGGEPL 181

Query: 107 RIGNLYLPHGNPI----------TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI 156
            +   +L   +               +  +  +  +            E   +  GD+N 
Sbjct: 182 SLFVAHLKSMSGARNGQDGRTSSHPVRLAEARAIRRIIEEKFGIDRVTERRWLICGDFND 241

Query: 157 IPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS 216
             +            +    +E   +   L   GF   +         ++ +        
Sbjct: 242 YRERILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDRWTLYHTRGPLER 301

Query: 217 KNKGIRIDHIMLSPEATSLLHSA-------------------RIDTKPR-GWTKP--SDH 254
                ++D+IM SP   +    A                    +D  PR GW +P  SDH
Sbjct: 302 --HLCQLDYIMASPAFAAKNEHAVPDIIRRGQPWRTIFPPEQNVDRYPRTGWDRPKVSDH 359

Query: 255 TPVIVSLDI 263
            PV V+L++
Sbjct: 360 CPVSVTLNM 368


>gi|294952851|ref|XP_002787481.1| ap endonuclease, putative [Perkinsus marinus ATCC 50983]
 gi|239902483|gb|EER19277.1| ap endonuclease, putative [Perkinsus marinus ATCC 50983]
          Length = 563

 Score = 52.9 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 60/171 (35%), Gaps = 14/171 (8%)

Query: 7   ATWNVNS-IRARI-----HN-LAAWIKENNPDIICLQETKTEDKNFPFETLQ---SLNYH 56
            +WNV   IR        H  +A ++ +++ DI+ +QE+K           Q    + Y 
Sbjct: 1   MSWNVAGWIRTAKLIVKYHGSVAKYLMKHDVDILAVQESKVSKARVSSVEAQQAVPMGYE 60

Query: 57  IETCG---QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
                   +  +NGV    +             +            T +   + I N+Y+
Sbjct: 61  AYWSHSTSKPGFNGVCTFVREGIPVRDVLNKPFNDSRFDDEGRCLVTFHNDDVAIVNVYV 120

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
           P+G      +   KI ++ +         E    +I  GD N+ P P D +
Sbjct: 121 PNGG-EGGKRLPYKIQFLYKLRALCKGLREKGWRVILLGDLNMSPDPRDIW 170



 Score = 45.2 bits (105), Expect = 0.011,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 24/65 (36%), Gaps = 1/65 (1%)

Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIM 227
           W          R      +  G  D+ R  H +    ++ WD Y +    N G RID+I+
Sbjct: 313 WGMGRGSEDIKRWLNDMKEVDGMIDSFRLAHPSAEDRFTCWDQYRNRRYANAGSRIDYIL 372

Query: 228 LSPEA 232
           +    
Sbjct: 373 VDNTI 377


>gi|85859313|ref|YP_461515.1| hypothetical protein SYN_02542 [Syntrophus aciditrophicus SB]
 gi|85722404|gb|ABC77347.1| hypothetical membrane protein [Syntrophus aciditrophicus SB]
          Length = 346

 Score = 52.9 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 74/259 (28%), Gaps = 18/259 (6%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V TWN+   R +       I    PD++  Q       +        L  H+      
Sbjct: 98  IRVMTWNIKYDRRKAARFIREIDRCKPDVLLFQ-------DAWNSMRGPLGKHMPPDWHV 150

Query: 64  SYNG-VAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
              G   I S+Y   E   H        +  F+    T+ +  + + N++         T
Sbjct: 151 LTRGQYVIASRYPLSEAEVHELPFSGKRKESFLRCRMTVGSTAISLYNVHFKTPRNSFYT 210

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
               K       L    +  +    +  A    I         P+I   D          
Sbjct: 211 L--SKAKSRPWDLPEFIRSFDNNMKIRIAQAATIREYLIAERGPVILSGDLNAPDASLVC 268

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYAD-SWSKNKGIRIDHIMLSPEATSLLHSARI 241
                               H Y  +       W +   +RIDHIM + +  +   + R+
Sbjct: 269 STLRGAGLRDAFAEGGRGYGHTYGHFLLKNRLPWLRFSWMRIDHIMSNAQLKTR--NCRV 326

Query: 242 DTKPRGWTKPSDHTPVIVS 260
                G  K SDH PVI  
Sbjct: 327 -----GTGKASDHRPVIAD 340


>gi|254694063|ref|ZP_05155891.1| Endonuclease/exonuclease/phosphatase [Brucella abortus bv. 3 str.
           Tulya]
 gi|261214359|ref|ZP_05928640.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 3 str.
           Tulya]
 gi|260915966|gb|EEX82827.1| endonuclease/exonuclease/phosphatase [Brucella abortus bv. 3 str.
           Tulya]
          Length = 369

 Score = 52.9 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 42/309 (13%), Positives = 78/309 (25%), Gaps = 75/309 (24%)

Query: 25  IKENNPDIICLQETKTEDKNFPFETLQ--------SLNYHIETCGQKSYNGVAILSKYQP 76
           I E   DI+CLQE    D        +           Y  +     + +    ++    
Sbjct: 65  IAETRADILCLQEV---DNLAALNAFEYGYLFKMIGYGYRHKYLIDGNDSRGIDVAVMMR 121

Query: 77  IEIVTHLPG------------------------------DDLDVQARFIEATFTINTQTL 106
                  P                                D   +   +     I  + L
Sbjct: 122 DTTRDGQPIEVDEVTSHAHLTYSDFGIYQPELAELGLEPHDRIFKRDCLNVDLRIGGEPL 181

Query: 107 RIGNLYLPHGNPI----------TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI 156
            +   +L   +               +  +  +  +            E   +  GD+N 
Sbjct: 182 SLFVAHLKSMSGARNGQDGRPSSHPVRLAEARAIRRIIEEKFGIDRVTERRWLICGDFND 241

Query: 157 IPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS 216
             +            +    +E   +   L   GF   +         ++ +        
Sbjct: 242 YRERILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDRWTLYHTRGPLER 301

Query: 217 KNKGIRIDHIMLSPEATSLLHSA-------------------RIDTKPR-GWTKP--SDH 254
                ++D+IM SP   +    A                    +D  PR GW +P  SDH
Sbjct: 302 --HLCQLDYIMASPAFAAKNEHAVPDIIRRGQPWRTIFPPEQNVDRYPRTGWDRPKASDH 359

Query: 255 TPVIVSLDI 263
            PV V+L++
Sbjct: 360 CPVSVTLNM 368


>gi|229056209|ref|ZP_04195634.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH603]
 gi|228721126|gb|EEL72659.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH603]
          Length = 263

 Score = 52.9 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 34/271 (12%), Positives = 66/271 (24%), Gaps = 19/271 (7%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET--KTEDKNFP----FETLQS 52
           + + T N +S +      +I  LA  I+E + D+I LQE     + +N       +    
Sbjct: 1   MKLLTLNCHSWQEENQIEKIKYLAKVIQEEDYDVIALQEVSQSIQAENVCGNKKKDNFGL 60

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           L              +     +   ++                +  F    +        
Sbjct: 61  LLLEELRALNVKEYNIIWDFSHIGYDVYEEGLAIITKHNIVKEDTFFVSENKDTTYWKTR 120

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                 I     +              +    ++        N         +       
Sbjct: 121 KIVSATIAYNDKNITFYSCHLGWWNDEEESFKDQVDRLMERVNSNELSFLMGDFNNNARL 180

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                E                           + WD         + +RID I+ +   
Sbjct: 181 EGEGYEYTMQKGLYDTYELAIEKDEGTTVQGEIAGWD------ENKQNLRIDLILSNQS- 233

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              ++S+++          SDH  V V LDI
Sbjct: 234 -KTVNSSKVIFNGTNRNVISDHFGVEVQLDI 263


>gi|218662309|ref|ZP_03518239.1| putative phosphatase protein [Rhizobium etli IE4771]
          Length = 102

 Score = 52.9 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 12/63 (19%)

Query: 201 THHLYSFWDYYADSWSKNKGIR--IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVI 258
               YS+ D       ++ G R  +D+  +S    S L SARIDT+  G    SDH P+ 
Sbjct: 48  RPESYSWMD------PEDHGKRMHLDYCFVSCGLVSRLKSARIDTQSVG----SDHFPLW 97

Query: 259 VSL 261
           V +
Sbjct: 98  VEI 100


>gi|256113921|ref|ZP_05454714.1| Endonuclease/exonuclease/phosphatase family protein [Brucella
           melitensis bv. 3 str. Ether]
 gi|265995273|ref|ZP_06107830.1| endonuclease/exonuclease/phosphatase [Brucella melitensis bv. 3
           str. Ether]
 gi|262766386|gb|EEZ12175.1| endonuclease/exonuclease/phosphatase [Brucella melitensis bv. 3
           str. Ether]
          Length = 369

 Score = 52.9 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 42/309 (13%), Positives = 79/309 (25%), Gaps = 75/309 (24%)

Query: 25  IKENNPDIICLQETKTEDKNFPFETLQ--------SLNYHIETCGQKSYNGVAILSKYQP 76
           I E   DI+CLQE    D        +           Y  +     + +    ++    
Sbjct: 65  IAETRADILCLQEV---DNLAALNAFEYGYLFKMIGYGYRHKYLIDGNDSRGIDVAVMMR 121

Query: 77  IEIVTHLPG------------------------------DDLDVQARFIEATFTINTQTL 106
                  P                                D   +   +     I  + L
Sbjct: 122 DTTRDGQPIEVDEVTSHAHLTYSDFGIYQPELAELGLEPHDRIFKRDCLNVDLRIGGEPL 181

Query: 107 RIGNLYLPHGNPITSTK----------YDDKISWIKRFLRFASQRLELEEPLIFAGDYNI 156
            +   +L   +   + +            +  +  +            E   +  GD+N 
Sbjct: 182 SLFVAHLKSMSGAHNGQDGRTSSHPVRLAEARAIRRIIEEKFGIDRVTERRWLICGDFND 241

Query: 157 IPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS 216
             +            +    +E   +   L   GF   +         ++ +        
Sbjct: 242 YRERILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDRWTLYHTRGPLER 301

Query: 217 KNKGIRIDHIMLSPEATSLLHSA-------------------RIDTKPR-GWTKP--SDH 254
                ++D+IM SP   +    A                    +D  PR GW +P  SDH
Sbjct: 302 --HLCQLDYIMASPAFAAKNEHAVPDIIRRGQPWRTIFPPEQNVDRYPRTGWDRPKASDH 359

Query: 255 TPVIVSLDI 263
            PV V+L++
Sbjct: 360 CPVSVTLNM 368


>gi|71415753|ref|XP_809932.1| apurinic/apyrimidinic endonuclease [Trypanosoma cruzi strain CL
           Brener]
 gi|70874389|gb|EAN88081.1| apurinic/apyrimidinic endonuclease, putative [Trypanosoma cruzi]
          Length = 612

 Score = 52.9 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 41/145 (28%), Gaps = 20/145 (13%)

Query: 4   VTVATWNVNS-------IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFET------- 49
           + + +WNV         IR    ++A++++    +I+CLQE K        +        
Sbjct: 1   MFIISWNVAGWSSTSRMIREDFGSIASFLQRTQAEIVCLQEVKGSWAKLEADPCGMGASD 60

Query: 50  ----LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT 105
               L    +          +           + +T         +    +    I T  
Sbjct: 61  GGRTLAIDGWESFWSFSGKAHRGFNGVVSFVRKDLTWWCDSRPFSEEDLNDEGRVIVTCH 120

Query: 106 --LRIGNLYLPHGNPITSTKYDDKI 128
               + N Y+ +        +  + 
Sbjct: 121 SAFVVVNTYVVNARHGQRMAFKMRF 145



 Score = 49.8 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 17/37 (45%)

Query: 204 LYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            Y+ WD   +   +N+G RID+I++       L    
Sbjct: 393 PYTCWDQSRNRRQRNEGTRIDYILIDEMLLPALIPCG 429


>gi|225428456|ref|XP_002280534.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 1473

 Score = 52.9 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 27/244 (11%), Positives = 67/244 (27%), Gaps = 28/244 (11%)

Query: 16  ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75
           ++   + A I+    D+ CLQETK +                         GV       
Sbjct: 560 SKRKVIKAMIRSQRVDLFCLQETKIQP---------------------MAEGVVRSLGTG 598

Query: 76  PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135
                  L                T+    + +G   +          +    + +    
Sbjct: 599 RFLEWGALDAHGSAGGVLICWDKRTLEMIEMEVGQFSISCRLRNVEDGFVWTFTGVYGPF 658

Query: 136 RFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAI 195
               +    EE     G ++        +N ++ + +      +  + ++   +     +
Sbjct: 659 SRVDREAFWEELGAIRGIWSDPWCIGGDFNVVLSQRERSSQGRISGAMRRFAQVVDDLEL 718

Query: 196 RATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHT 255
                   ++S+    +   +     R+D  +++           I  + R     SDH 
Sbjct: 719 LDLPLQGGVFSW----SGGRNNQAWARLDRFLVTQCWPDNF--CGIV-QCRLPRPTSDHF 771

Query: 256 PVIV 259
           P+++
Sbjct: 772 PIML 775


>gi|322390094|ref|ZP_08063629.1| RgfB protein [Streptococcus parasanguinis ATCC 903]
 gi|321143221|gb|EFX38664.1| RgfB protein [Streptococcus parasanguinis ATCC 903]
          Length = 270

 Score = 52.9 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 35/275 (12%), Positives = 75/275 (27%), Gaps = 20/275 (7%)

Query: 4   VTVATWNVNSI---RARIH--NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           +   T N +S     A+     L   I E   D+IC QE    ++    E +++  Y+  
Sbjct: 1   MKFLTLNSHSWMEENAQQKFETLKEQILEAQYDVICFQEV---NQEMASEVVKTDEYYQA 57

Query: 59  ----------TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108
                        +     +A    +       +  G D   +   + +   +    + +
Sbjct: 58  LPSAVAIHKDHFVRVLVEELAAQGLHYYWTWAYNHIGYDHLNEGVAVLSRQPLKADEILV 117

Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168
            N+  P                 K     +      ++   F                I+
Sbjct: 118 SNMDDPTDYHTRRVAVAHTSVDGKEIAVASVHLSWWDKGFQFEWPRIEKYFSQVGKPFIL 177

Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
             +      +         ++   D+     +T   Y+              +RID++  
Sbjct: 178 AGDFNNPAGQEGYETILSSSLKLQDSFIEAKETKGTYTVGPGIDGWTDNQVPLRIDYVFA 237

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           SPE    +    +    +     SDH  +   L +
Sbjct: 238 SPEWD--IQRLHVIFDDQNKPHVSDHYGLEAELSL 270


>gi|311745839|ref|ZP_07719624.1| endonuclease/exonuclease/phosphatase family protein [Algoriphagus
           sp. PR1]
 gi|311302431|gb|EAZ80320.2| endonuclease/exonuclease/phosphatase family protein [Algoriphagus
           sp. PR1]
          Length = 286

 Score = 52.9 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 34/247 (13%), Positives = 65/247 (26%), Gaps = 16/247 (6%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQP 76
           R+  ++  I+ +  +I+ +QE              SL Y     G+         +    
Sbjct: 53  RLPEVSKLIQFHQIEIVGIQE--GLHDQV-VGLSNSLGYSFIGVGRDDGTEKGEYAAILY 109

Query: 77  IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
            +    L        +   E         L     +    +    T +   I        
Sbjct: 110 NQDNFKLLDSGTFWLSPTPEKPSKGWDAALNRICTWGKFQDREGVTFFIFNI-----HYD 164

Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL-QNMGFTDAI 195
              Q+   E   +       +         +   N                       + 
Sbjct: 165 HIGQQAREESSKLVMNQVAKLNPEGAPAIMMGDFNVTPDNPAYTTITSNPAWKDSRLISK 224

Query: 196 RATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHT 255
             ++     ++ +D+         GI IDH+ +       +    I +   G   PSDH 
Sbjct: 225 IPSYGPKGTFTGFDWERMP----DGI-IDHVFVYGPIE--VIRHGILSDNYGKKYPSDHF 277

Query: 256 PVIVSLD 262
           PV+V LD
Sbjct: 278 PVLVELD 284


>gi|326539108|gb|ADZ87323.1| endonuclease/exonuclease/phosphatase [Brucella melitensis M5-90]
          Length = 357

 Score = 52.9 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 42/309 (13%), Positives = 78/309 (25%), Gaps = 75/309 (24%)

Query: 25  IKENNPDIICLQETKTEDKNFPFETLQ--------SLNYHIETCGQKSYNGVAILSKYQP 76
           I E   DI+CLQE    D        +           Y  +     + +    ++    
Sbjct: 53  IAETRADILCLQEV---DNLAALNAFEYGYLFKMIGYGYRHKYLIDGNDSRGIDVAVMMR 109

Query: 77  IEIVTHLPG------------------------------DDLDVQARFIEATFTINTQTL 106
                  P                                D   +   +     I  + L
Sbjct: 110 DTTRDGQPIEVDEVTSHAHLTYSDFGIYQPELAELGLEPHDRIFKRDCLNVDLRIGGEPL 169

Query: 107 RIGNLYLPHGNPI----------TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI 156
            +   +L   +               +  +  +  +            E   +  GD+N 
Sbjct: 170 SLFVAHLKSMSGARNGQDGRASSHPVRLAEARAIRRIIEEKFGIDRVTERRWLICGDFND 229

Query: 157 IPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS 216
             +            +    +E   +   L   GF   +         ++ +        
Sbjct: 230 YRERILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDRWTLYHTRGPLER 289

Query: 217 KNKGIRIDHIMLSPEATSLLHSA-------------------RIDTKPR-GWTKP--SDH 254
                ++D+IM SP   +    A                    +D  PR GW +P  SDH
Sbjct: 290 --HLCQLDYIMASPAFAAKNEHAVPDIIRRGQPWRTIFPPEQNVDRYPRTGWDRPKASDH 347

Query: 255 TPVIVSLDI 263
            PV V+L++
Sbjct: 348 CPVSVTLNM 356


>gi|300691813|ref|YP_003752808.1| hypothetical protein RPSI07_2169 [Ralstonia solanacearum PSI07]
 gi|299078873|emb|CBJ51534.1| conserved protein of unknown function,
           endonuclease/exonuclease/phosphatase family [Ralstonia
           solanacearum PSI07]
          Length = 289

 Score = 52.9 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 43/299 (14%), Positives = 85/299 (28%), Gaps = 52/299 (17%)

Query: 1   MSVVTVATWN------VNSIRARIHNLAAWIKENNP-DIICLQETKTEDKNFP------- 46
           M  + + TWN      V+  R  +  + A  +   P D++CLQE  +   N P       
Sbjct: 1   MGTI-ILTWNIQWGRGVDG-RVDLPRMLAEARAMGPFDVLCLQEVTSGFGNLPGQPGDDQ 58

Query: 47  -FETLQSLNYHI----------ETCGQKSYNGVAILSKYQPIEIVTHLPGDD----LDVQ 91
             E  ++L                  +    G AI ++   + +  H           + 
Sbjct: 59  WHELARALGQEFTLIDGIALERHEGARIQRFGNAIATRLPVLHVARHALPCPVDTSPTMP 118

Query: 92  ARFIEATFTINTQTLRIGNLYLPHGNPITSTKYD---DKISWIKRFLRFASQRLELEEPL 148
              IEAT       LR+ + +L + +             +             L  E   
Sbjct: 119 RMAIEATVQAPFGPLRVVSTHLEYYSETQRIAQIDVLRALHVAGCMRTAHPPTLGPEPAD 178

Query: 149 IFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG-FTDAIRATHDTHHLY-- 205
                         C +     N     L       +   +    +           +  
Sbjct: 179 GPFRPLAQTHASVICGDFNCKRNSTPKRLATVPFSHETVALYDAWEIAHGPAPQPPTFGV 238

Query: 206 ---SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
              + W   A +         D +++S    + +    +++     T+ SDH P+++ L
Sbjct: 239 HDRTGWTEPAYA--------CDFMLVSEPLKTRVARVEVNSA----TQASDHQPMLLEL 285


>gi|147835100|emb|CAN61375.1| hypothetical protein VITISV_037805 [Vitis vinifera]
          Length = 1765

 Score = 52.9 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/262 (13%), Positives = 71/262 (27%), Gaps = 41/262 (15%)

Query: 6   VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +WNV  + +R     +  +++  NPD + +QETK                      + 
Sbjct: 762 IISWNVRGLGSRNKRRMVKDFLRSENPDXVMIQETK---------------------KEN 800

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
                         +    LP          I  +  +  + + IG+  +     +    
Sbjct: 801 CDRRFVGSVXTXRNKDWVALPXSGASXGILIIWDSKNLRREEVVIGSFSVSVKFSLDGCG 860

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
                +         ++   +E   I+   Y   P      +  +    +        + 
Sbjct: 861 PLWISTVYGPNSPSLTKDFWVELFDIYGLTY---PLWCVGGDFNVIRRSSEKMGGSSLTP 917

Query: 184 QKLQNMGFTDAIRATHDTHHLYSF-WDYYADSWSKNKGIRIDHIMLSPEAT----SLLHS 238
                  F              SF W    +S       R+D  + S E        L  
Sbjct: 918 SMRDFDSFIRECELLDPPLRNASFTWSNMQESPVCK---RLDRFLYSNEWGLLFPQGLQE 974

Query: 239 ARIDTKPRGWTKPSDHTPVIVS 260
           A I        + SDH P+++ 
Sbjct: 975 ALI-------RRTSDHWPIVMD 989


>gi|67526939|ref|XP_661531.1| hypothetical protein AN3927.2 [Aspergillus nidulans FGSC A4]
 gi|40740046|gb|EAA59236.1| hypothetical protein AN3927.2 [Aspergillus nidulans FGSC A4]
 gi|259481499|tpe|CBF75076.1| TPA: inositol phosphosphingolipid phospholipase C (Eurofung)
           [Aspergillus nidulans FGSC A4]
          Length = 451

 Score = 52.9 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 51/329 (15%), Positives = 92/329 (27%), Gaps = 61/329 (18%)

Query: 4   VTVATWNVNSIR-------ARIHNLAAWIKENNP--DIICLQETKTED--KNFPFETLQS 52
           + + T N   ++        R+  +   +   NP  DII LQE  T+   ++   +    
Sbjct: 7   IRILTLNCWGLKYLAKYRHERLSEIGRQLALANPPPDIIGLQECWTQQDYESIRTQIAHI 66

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ-------- 104
           L Y     G     G+AI SK+   +   H    +    A F    F             
Sbjct: 67  LPYGKFYFGGIWGAGLAIFSKWPIEQTSMHAYPLNGRPTAFFRGDWFVGKGVACARIRYG 126

Query: 105 -------TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII 157
                   +   +L+ P+      +    + +      +      E    +I  GD+N++
Sbjct: 127 QGKHDVAEVFCTHLHAPYEQEPHDSYLAHRTAQAWEIAKLMRGAAERGHLVIGLGDFNML 186

Query: 158 PQPHDCYNPIIWENDACFTLEVR-------------QSFQKLQNMGFTDAIRATHDTHHL 204
           P                    +              Q+  K       +           
Sbjct: 187 PSSFAHRLICAHSPVVDAWQVIYPDSSVGAAKDAVEQARGKPVPSAEFNLHHNGATCDGP 246

Query: 205 Y-SF-WDYYADSW---------------SKNKGIRIDHIMLSPEATSLLHSARI---DTK 244
           Y ++ W                         KG R+D+I +  E    +    I      
Sbjct: 247 YNTWRWSKKDQKRLDKGHDIAVEAFKDSPDYKGKRLDYIFVGGEVGWSVRDVNIAMTQRH 306

Query: 245 PRGWTKPSDHTPV--IVSLDIPEPRKKQQ 271
           P      SDH  V  +++ D+     KQ+
Sbjct: 307 PTLKCSLSDHFAVQTVITRDVSSMAAKQE 335


>gi|290962564|ref|YP_003493746.1| endonuclease/exonuclease/phosphatase family protein [Streptomyces
           scabiei 87.22]
 gi|260652090|emb|CBG75222.1| putative endonuclease/exonuclease/phosphatase family protein
           [Streptomyces scabiei 87.22]
          Length = 295

 Score = 52.9 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 42/277 (15%), Positives = 82/277 (29%), Gaps = 37/277 (13%)

Query: 4   VTVATWNVNSIR------------ARIHNLAAWIKENNPDIICLQE-----TKTEDKNFP 46
           + V T+NV   R             R   +   ++   P +I  QE      +  +K+  
Sbjct: 38  LNVMTFNV---RFATVVDKTPRWTVRRPVMRELLRRERPHVIGTQEGLYQQLRMIEKDL- 93

Query: 47  FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
                  +Y     G+   +    ++ +     +  +  D   +                
Sbjct: 94  -----GGHYDWIGTGRGGGSKDEFMAIFYDTRRLDPIEFDHYWLSDTPYTIASNTWGADW 148

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
                ++   +     +    ++     +   ++    +        +            
Sbjct: 149 LRMVTWVKFADLADGGREFYVLNTHLDSVSQYARERSAKLVGETIAGW----DRSAPVVV 204

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226
               N A     V +       +   DA  +    +   ++  Y A    K  G RID I
Sbjct: 205 TGDFNAAAHDNRVYELMLGNGLVDAWDAAASRSPAYG--TYHGYRAL---KPDGRRIDWI 259

Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           + SP  T+  H A ++T       PSDH PV VSL +
Sbjct: 260 LTSPGVTT--HWAAMNTFSVDGLYPSDHLPVQVSLTL 294


>gi|21232876|ref|NP_638793.1| hypothetical protein XCC3447 [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66767053|ref|YP_241815.1| hypothetical protein XC_0717 [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|21114707|gb|AAM42717.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66572385|gb|AAY47795.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. 8004]
          Length = 288

 Score = 52.9 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 34/271 (12%), Positives = 70/271 (25%), Gaps = 28/271 (10%)

Query: 4   VTVATWNV------NS---IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           + V ++NV      +     +AR   + + IK+ +PD+   QE  +E   +    L +  
Sbjct: 35  LRVMSFNVRVPVDTDGDKRWQARRGAMVSVIKQTHPDVFGTQELVSEQAGYLAAQLPNYR 94

Query: 55  YHIETCGQKSYNGVA-ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
           +  +       +    +    + + +V        D        T+      +    L+ 
Sbjct: 95  WFGQGRRGDDSDEHMGVFYDTRTLNVVESGNFWLSDTPEVAGSITWGNVLPRMVTWALFE 154

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
              +      ++    +                  +       +P          + +D 
Sbjct: 155 RRSDKRRFYLFNTHFPYRDEDEPAREHSAR-----LILSRIAQLPADIPVVLTGDFNSDP 209

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
                   +                 +T   +S               RID I+     T
Sbjct: 210 DKITYPTLTAVLGDARARAPKRSGPENTFQDFSTHPTR----------RIDWILF-RGLT 258

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
                        G   PSDH PV+     P
Sbjct: 259 P--TQFTTLDDRPGGVLPSDHYPVLAEFAWP 287


>gi|224134090|ref|XP_002327753.1| predicted protein [Populus trichocarpa]
 gi|222836838|gb|EEE75231.1| predicted protein [Populus trichocarpa]
          Length = 366

 Score = 52.9 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 20/102 (19%), Positives = 30/102 (29%), Gaps = 29/102 (28%)

Query: 207 FWDYYADSWSKNKGIRIDHIML-------------SPEATSLLHSARIDTKPRGWT---- 249
            W     +   N G RIDHI+              +   +  +    I T+ + W     
Sbjct: 94  CWSLSTGAEQFNFGSRIDHILCAGPCLHQEHDLQGNNSLSCHVKECDILTEYKRWKLGDT 153

Query: 250 -----------KPSDHTPVIVSL-DIPEPRKKQQDSTSQNMK 279
                      + SDH PV  SL +I +         S    
Sbjct: 154 SRWKGGWGIRLEGSDHAPVYTSLEEIHDIPTHSTLPLSSRYL 195


>gi|196230561|ref|ZP_03129423.1| Endonuclease/exonuclease/phosphatase [Chthoniobacter flavus
           Ellin428]
 gi|196225491|gb|EDY19999.1| Endonuclease/exonuclease/phosphatase [Chthoniobacter flavus
           Ellin428]
          Length = 303

 Score = 52.9 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 51/292 (17%), Positives = 82/292 (28%), Gaps = 47/292 (16%)

Query: 6   VATWNV-NSI------------RARIH------NLAAWIKENNPDIICLQETKTEDKNFP 46
           +AT+NV N +            +A++        +   +K+ NPDI+ + E   E + F 
Sbjct: 30  IATYNVENYLGEESVAADTGPRKAKLKSEKEIDAVVRVVKDINPDILGICEM-GEPERFE 88

Query: 47  --FETLQSLNYH---IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI 101
              + L     H    E            L    PI     L     ++  +  +     
Sbjct: 89  DFKKRLADAGLHYTDFEYVQALDNQRHLALVSRYPIVARQSLSNVSYELAGQPEKVRRGF 148

Query: 102 NTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161
              T+ I   Y                       R  +  L      I   D N+     
Sbjct: 149 LDVTIEIRPGYQVRFVSAHLKSKLPVPEGEALVRRNEASLLRKHLDEILVADPNVRLVCF 208

Query: 162 DCYNPIIW---ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN 218
             +N +      ++                    D          LYS            
Sbjct: 209 GDFNDLKNEPAYHEVAGVHGPTYMTALPAKDELGDTWTEYWKAADLYS------------ 256

Query: 219 KGIRIDHIMLSPEATSLLH--SARIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268
              RID+I +SP     +   S R+      W   SDH PV  ++ +P  RK
Sbjct: 257 ---RIDYIFVSPVLHREISPGSPRVYRSA-YWNDASDHRPVYATI-VPSGRK 303


>gi|326318344|ref|YP_004236016.1| endonuclease/exonuclease/phosphatase [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gi|323375180|gb|ADX47449.1| Endonuclease/exonuclease/phosphatase [Acidovorax avenae subsp.
           avenae ATCC 19860]
          Length = 252

 Score = 52.9 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 40/282 (14%), Positives = 81/282 (28%), Gaps = 62/282 (21%)

Query: 3   VVTVATWNVN----SI----RARIHNLAAWIKENNPDIICLQET-KTE---DKNFPF--- 47
           ++ +AT+N++     +    R  IHNL   +++ + DI+CLQE  K      ++FP    
Sbjct: 12  ILRIATYNIHKGVQGLGPARRLEIHNLGHAVEQLDADIVCLQEVRKVHRRGAQHFPRWPE 71

Query: 48  ----ETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
               E L    Y                     +     + G   +  +        +  
Sbjct: 72  LPQAEFLAPEGYEAVYRTNAF---TRHGEHGNALLTRWPVIGHQHEDMSDHRFEQRGLLH 128

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
             + +    +             ++  + +  RF ++ +    PL+ AGD+N        
Sbjct: 129 VEVEVQGRRVHAIVVHLGLIPGSRVRQVAQLQRFVAREVPDGAPLLVAGDFND------- 181

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223
                               ++ +         A                         +
Sbjct: 182 ------WGQQVKHALAAFGLREYEGEPRALTYPARLPLVQ-------------------L 216

Query: 224 DHIMLS--PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           DH+ +         +   RI      W + SDH P+I    +
Sbjct: 217 DHVYVRGMEPMGLHVPRGRI------WWRMSDHLPLIAEFRL 252


>gi|147788232|emb|CAN71594.1| hypothetical protein VITISV_005028 [Vitis vinifera]
          Length = 363

 Score = 52.9 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 26/246 (10%), Positives = 66/246 (26%), Gaps = 30/246 (12%)

Query: 16  ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75
           ++   +  +I+    D++C+QETK ++                        G+       
Sbjct: 31  SKRKIIKNYIRNQRVDLMCIQETKIQE---------------------MSEGIVRSLGSG 69

Query: 76  PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135
                  L  +              +       G   L               + +    
Sbjct: 70  RFLDWRALNAEGAAGGILICWDKRVLEILDWEEGQFSLSCRFKTIENGATWVFTGVYDPF 129

Query: 136 RFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAI 195
               +    EE     G ++        +N  +++++      +  + ++         +
Sbjct: 130 TKVEREGMWEELGAIRGLWDDPWCLGGDFNITLFQHERSSQRRISSAMRRFAESVDDLEL 189

Query: 196 RATHDTHHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDH 254
                    +++          N+   R+D  ++SP            T+ R     SDH
Sbjct: 190 VDLPLQGGEFTW-----SGGLNNQAWARLDRFLVSPSWLDQFSGV---TQGRLSRPTSDH 241

Query: 255 TPVIVS 260
            P+++ 
Sbjct: 242 FPIVLE 247


>gi|228906140|ref|ZP_04070029.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis IBL
           200]
 gi|228853549|gb|EEM98317.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis IBL
           200]
          Length = 263

 Score = 52.9 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 35/271 (12%), Positives = 64/271 (23%), Gaps = 19/271 (7%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET--KTEDKNFP----FETLQS 52
           + + T N +S +      +I  LA  I+E   D+I LQE     + +N       +    
Sbjct: 1   MKLLTLNCHSWQEENQIEKIQYLAKVIQEEEYDVIALQEVSQSIQAENVCGNKKEDNFGL 60

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           L              +     +   ++                +  F    +        
Sbjct: 61  LLLEELKALHVKDYNITWDFSHIGYDVYEEGLAIITKHNIIKEDTFFISENEDTTYWKTR 120

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                 I     D              +     +        +         +       
Sbjct: 121 KIVSTTIAYNGKDITFYSCHLGWWNDEEESFKGQVDRLMERVDSNKLAFLMGDFNNNARL 180

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                E                         + + WD           +RID I+ +   
Sbjct: 181 EGEGYEYMMQKGLYDTYELAIEKDEGTTVQGVIAGWD------ENKHNLRIDLILCNQS- 233

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              +HS+++          SDH  V V LDI
Sbjct: 234 -KKVHSSKVVFNGTNRNVISDHFGVEVQLDI 263


>gi|225012745|ref|ZP_03703180.1| Endonuclease/exonuclease/phosphatase [Flavobacteria bacterium
           MS024-2A]
 gi|225003278|gb|EEG41253.1| Endonuclease/exonuclease/phosphatase [Flavobacteria bacterium
           MS024-2A]
          Length = 335

 Score = 52.9 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 39/269 (14%), Positives = 75/269 (27%), Gaps = 42/269 (15%)

Query: 4   VTVATWNVNSIR-----------ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52
           ++V ++NV S             A I      I +  PDI+C QE   +++       + 
Sbjct: 95  ISVMSYNVRSFNRFNWIDSKNIPAEIEGF---INKEQPDIVCFQEY-AQNE---APDFEK 147

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
             Y I        +G           ++        + +   +   F     TLR+ N++
Sbjct: 148 YPYKIFKPYVG--SGQIGSCIISKFPLLNSKSISFKESKNGGMYTDFLWKKDTLRLYNVH 205

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                  +           K   +         + +    D   + +  +     +  N 
Sbjct: 206 FESLRIDSKDTLIAAEYSQKFRRKINEVFKIQNQQVAQFNDIKNLNEYPEIICTDLNNN- 264

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                          + G  D+     +         Y    +     +RID IM SP+ 
Sbjct: 265 ------AFSKSYLNLSRGRKDSFLEKGEGFGA----TYNFLKFP----LRIDFIMSSPKI 310

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
                   I +        SDH P+ +  
Sbjct: 311 -------NILSYKTHKVNLSDHKPISIIF 332


>gi|145545333|ref|XP_001458351.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124426170|emb|CAK90954.1| unnamed protein product [Paramecium tetraurelia]
          Length = 326

 Score = 52.9 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 40/267 (14%), Positives = 85/267 (31%), Gaps = 28/267 (10%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAI------ 70
           R   +   +K  N DI+CLQE   ++  F  + +++L Y I  C +   +   +      
Sbjct: 64  RSTKIIDQLKNFNADILCLQEV--DNIEFYQDNIKNLQYDICYCQRPQRSDGCLIAFKIE 121

Query: 71  ---------LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
                     S  Q                 + +     +  +   IGN++         
Sbjct: 122 KFKILISQEYSLDQLALDYGLPLQYLRQNVFQIVRLEHLLTKKQFIIGNIHTFWNPNQDD 181

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            K+   +  +       +Q+   ++ LIF GD+N +P+ +                    
Sbjct: 182 LKFFQIVQLV---QFMEAQKESEDQILIFCGDFNSLPKSNPIQYIQKNNPIVERIEMSTN 238

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS--- 238
             +   ++         +     Y  +  + + ++ N    ID+I         + S   
Sbjct: 239 QIKLQNDIFQHYGPPKLNW-ESAYHPFPTFTN-YTNNFKGCIDYIYYHNAKVEKILSIPN 296

Query: 239 -ARIDTKP--RGWTKPSDHTPVIVSLD 262
            + +  +        PSDH P++   D
Sbjct: 297 QSLLQKEVALPNSNFPSDHVPILAYFD 323


>gi|50289871|ref|XP_447367.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49526677|emb|CAG60304.1| unnamed protein product [Candida glabrata]
          Length = 493

 Score = 52.9 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 66/194 (34%), Gaps = 5/194 (2%)

Query: 15  RARIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYHIETCGQKSYN-GVAILS 72
           R+R+  L    K  +PD++CLQE    + ++F  E  Q L Y  +   + S N GV I+ 
Sbjct: 122 RSRV--LLNEFKHYDPDVLCLQEIDYIQYQSFWKEEFQKLGYSSQFHRKPSKNHGVCIIW 179

Query: 73  KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKI-SWI 131
           K++  E+   +  D    ++  IE   T N   L +   +      +     DDK    +
Sbjct: 180 KHEKFEMSDRMLIDFDSEKSGDIEPRTTTNNAALILALKFTQKVKMMGKKLLDDKSGILV 239

Query: 132 KRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191
                F       E         N + +     N +   ND   +           +  F
Sbjct: 240 GTTHLFWHPFGTYERTRQCYVVLNKMKEFMHRVNVLQNNNDGDMSHWYPFFCGDFNSQPF 299

Query: 192 TDAIRATHDTHHLY 205
                +       Y
Sbjct: 300 DSPYLSMTCKPIKY 313


>gi|17986911|ref|NP_539545.1| hypothetical protein BMEI0628 [Brucella melitensis bv. 1 str. 16M]
 gi|17982554|gb|AAL51809.1| hypothetical protein BMEI0628 [Brucella melitensis bv. 1 str. 16M]
          Length = 337

 Score = 52.9 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 42/309 (13%), Positives = 78/309 (25%), Gaps = 75/309 (24%)

Query: 25  IKENNPDIICLQETKTEDKNFPFETLQ--------SLNYHIETCGQKSYNGVAILSKYQP 76
           I E   DI+CLQE    D        +           Y  +     + +    ++    
Sbjct: 33  IAETRADILCLQEV---DNLAALNAFEYGYLFKMIGYGYRHKYLIDGNDSRGIDVAVMMR 89

Query: 77  IEIVTHLPG------------------------------DDLDVQARFIEATFTINTQTL 106
                  P                                D   +   +     I  + L
Sbjct: 90  DTTRDGQPIEVDEVTSHAHLTYSDFGIYQPELAELGLEPHDRIFKRDCLNVDLRIGGEPL 149

Query: 107 RIGNLYLPHGNPI----------TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI 156
            +   +L   +               +  +  +  +            E   +  GD+N 
Sbjct: 150 SLFVAHLKSMSGARNGQDGRTSSHPVRLAEARAIRRIIEEKFGIDRVTERRWLICGDFND 209

Query: 157 IPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS 216
             +            +    +E   +   L   GF   +         ++ +        
Sbjct: 210 YRERILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDRWTLYHTRGPLER 269

Query: 217 KNKGIRIDHIMLSPEATSLLHSA-------------------RIDTKPR-GWTKP--SDH 254
                ++D+IM SP   +    A                    +D  PR GW +P  SDH
Sbjct: 270 --HLCQLDYIMASPAFAAKNEHAVPDIIRRGQPWRTIFPPEQNVDRYPRTGWDRPKASDH 327

Query: 255 TPVIVSLDI 263
            PV V+L++
Sbjct: 328 CPVSVTLNM 336


>gi|261821654|ref|YP_003259760.1| endonuclease/exonuclease/phosphatase [Pectobacterium wasabiae
           WPP163]
 gi|261605667|gb|ACX88153.1| Endonuclease/exonuclease/phosphatase [Pectobacterium wasabiae
           WPP163]
          Length = 300

 Score = 52.9 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 39/280 (13%), Positives = 82/280 (29%), Gaps = 48/280 (17%)

Query: 4   VTVATWNVNS-IRAR---IHNLAAWIKENNPDIICLQET--KTED----KNFPF-----E 48
           + +A +N+   +R     ++ +A  I   +PDII L+E   KT                +
Sbjct: 46  LKIANYNIAGGLRNHKVDLNKVAKAINALDPDIIALEEVDQKTTRSDGIDQIKELAKLTK 105

Query: 49  TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108
              S    I+  G    N +      +  ++     GD         +         + I
Sbjct: 106 MYFSYGVAIQAHGGNYGNAILSKYPIEKTKVFKLPSGDYEQRSLMLSKINIPGFDSPVYI 165

Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168
            N +    +     +     +     + F    L+ + P +  G +              
Sbjct: 166 YNTHF---DWHEEDEVRMSQARFINSIVFDDLDLDKDFPNLATGIF-------ILAGDFN 215

Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
              +     E+ + +  ++  G               ++        + N G+ +DHI  
Sbjct: 216 STKNDRVVKELNKYWNLVEVAGKDTR-----------TWP-------AGNPGLDLDHIFT 257

Query: 229 SPEATSLLHSARIDTKPR-----GWTKPSDHTPVIVSLDI 263
                  +    I           W   SDH P++ +L +
Sbjct: 258 GKGQKWKIEKLTIPNDGSEEFGIKWQTTSDHIPIMATLKL 297


>gi|227543867|ref|ZP_03973916.1| conserved hypothetical protein [Lactobacillus reuteri CF48-3A]
 gi|227186128|gb|EEI66199.1| conserved hypothetical protein [Lactobacillus reuteri CF48-3A]
          Length = 50

 Score = 52.9 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 22/47 (46%), Gaps = 1/47 (2%)

Query: 4  VTVATWNVNSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFET 49
          +   +W+VN +++ I H      K  + D  CLQ T+ +    P + 
Sbjct: 1  MKFISWSVNGLKSAINHGFVEDFKRQDADFFCLQCTRLDKGEEPIQI 47


>gi|327262432|ref|XP_003216028.1| PREDICTED: protein angel homolog 2-like [Anolis carolinensis]
          Length = 562

 Score = 52.9 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 39/115 (33%), Gaps = 10/115 (8%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQ 62
           + TWN      R  N+ A IK+ N D++CLQE   ++  +  +    L++L YH E   +
Sbjct: 210 LLTWN-----YRFPNILAEIKKLNADVLCLQEV--QEDQYGTQIKPSLEALGYHCEYKMR 262

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
                    + ++  +            +              L +   +     
Sbjct: 263 TGRKPDGCATCFKTSKFSLVSSSPVEFFRRNIPLLDRDNVGLVLLLQPRFYCKTG 317


>gi|307311330|ref|ZP_07590973.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium meliloti
           BL225C]
 gi|307318863|ref|ZP_07598295.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium meliloti AK83]
 gi|306895584|gb|EFN26338.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium meliloti AK83]
 gi|306899631|gb|EFN30259.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium meliloti
           BL225C]
          Length = 368

 Score = 52.9 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 46/309 (14%), Positives = 90/309 (29%), Gaps = 76/309 (24%)

Query: 25  IKENNPDIICLQETKTEDKNFPFETLQ--------SLNYHIETCGQKSYNGVAILSKYQP 76
           I + + DI+CLQE    D     +  +           Y  +   + + +    ++    
Sbjct: 66  IADCDADILCLQE---ADNMAALQAFEYGYLFRMAGNGYRQKYLVEGNDSRGIDVAVLMR 122

Query: 77  IEIVTHLPGDDL-----------------------------DVQARFIEATFTINTQTLR 107
            E       + L                               +   +E    I  + L 
Sbjct: 123 EETRDGQKIECLEVKSHAALTYEDLDLFNDELALTNRPRDRIFKRDCLEVDVRIGGRPLT 182

Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPL----------IFAGDYNII 157
           +  ++L    P        + +   R     + R  +E                GD N  
Sbjct: 183 LYVVHLKSMGPAREGLDGRQATMAVRIAEVKAVRHIIERRFGRGHTADKVFAICGDMNDY 242

Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK 217
            +            +     E   +   L + GF +           ++ +        +
Sbjct: 243 QEKVKVLGDRRNGYEFLPHEETTSALDVLSHDGFVENPNLRRPVLDRWTLFHSRG---PE 299

Query: 218 NKGI-RIDHIMLSPEATSL-------LHSA------------RIDTKPR-GWTKP--SDH 254
           ++ + ++D+I LSPE           +  A             ++  PR GW +P  SDH
Sbjct: 300 DRHLCQLDYIWLSPELARRNAARLPEIIRAGQPYRTIFPAGQEVERYPRTGWDRPKASDH 359

Query: 255 TPVIVSLDI 263
            PV+++LDI
Sbjct: 360 CPVVMTLDI 368


>gi|254702100|ref|ZP_05163928.1| Endonuclease/exonuclease/phosphatase family protein [Brucella suis
           bv. 5 str. 513]
 gi|261752670|ref|ZP_05996379.1| endonuclease/exonuclease/phosphatase [Brucella suis bv. 5 str. 513]
 gi|261742423|gb|EEY30349.1| endonuclease/exonuclease/phosphatase [Brucella suis bv. 5 str. 513]
          Length = 369

 Score = 52.9 bits (125), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 43/309 (13%), Positives = 79/309 (25%), Gaps = 75/309 (24%)

Query: 25  IKENNPDIICLQETKTEDKNFPFETLQ--------SLNYHIETCGQKSYNGVAILSKYQP 76
           I EN  DI+CLQE    D        +           Y  +     + +    ++    
Sbjct: 65  IAENRADILCLQEV---DNLAALNAFEYGYLFKMIGYGYRHKYLIDGNDSRGIDVAVMMR 121

Query: 77  IEIVTHLPG------------------------------DDLDVQARFIEATFTINTQTL 106
                  P                                D   +   +     I  + L
Sbjct: 122 DTTRDGQPIEVDEVTSHAHLTYSDFGIYQPELAELGLEPHDRIFKRDCLNVDLRIGGEPL 181

Query: 107 RIGNLYLPHGNPI----------TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI 156
            +   +L   +               +  +  +  +            E   +  GD+N 
Sbjct: 182 SLFVAHLKSMSGARNGQDGRTSSHPVRLAEARAIRRIIEEKFGIDRVTERRWLICGDFND 241

Query: 157 IPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS 216
             +            +    +E   +   L   GF   +         ++ +        
Sbjct: 242 YRERILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDRWTLYHTRGPLER 301

Query: 217 KNKGIRIDHIMLSPEATSLLHSA-------------------RIDTKPR-GWTKP--SDH 254
                ++D+IM SP   +    A                    +D  PR GW +P  SDH
Sbjct: 302 --HLCQLDYIMASPAFAAKNEHAVPDIIRRGQPWRTIFPPEQNVDRYPRTGWDRPKASDH 359

Query: 255 TPVIVSLDI 263
            PV V+L++
Sbjct: 360 CPVSVTLNM 368


>gi|238061691|ref|ZP_04606400.1| hypothetical protein MCAG_02657 [Micromonospora sp. ATCC 39149]
 gi|237883502|gb|EEP72330.1| hypothetical protein MCAG_02657 [Micromonospora sp. ATCC 39149]
          Length = 457

 Score = 52.9 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 42/269 (15%), Positives = 72/269 (26%), Gaps = 22/269 (8%)

Query: 6   VATWNV--------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57
           V T+N+        NS   R   +   +    PD+I  QE             Q L    
Sbjct: 59  VMTFNLRYASSSRPNSWAQRRPAMRELLTAEQPDLIGTQE--GLAGQL-ANIKQDLGSRY 115

Query: 58  ETCGQKSYNGVAI-LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
           E  G     G                         +   E   +       I  +     
Sbjct: 116 ELIGVGREGGTRGEYMAIFYDNTRLQPLEQHHFWLSDTPEVVGSNTWGGGSIRMVTWVRF 175

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
             + +      ++         ++    +     A    + P                 +
Sbjct: 176 RDVVTGGQLYAVNTHLDNASALARERAAQLIR--ARLAALAPGLPIVLTGDFNSGPWAGS 233

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
                  ++   +    A  AT   +   ++ +Y         G RID I+ +   T  +
Sbjct: 234 PVYDVLVRQAGLVDTWTAAAATGPAYG--TYHNYQPLVAG---GARIDWILATRGVT--V 286

Query: 237 HSARIDTKPRG-WTKPSDHTPVIVSLDIP 264
            +A I+T   G    PSDH PV   L +P
Sbjct: 287 SAAAINTYGSGSGQFPSDHLPVQARLRLP 315


>gi|282863431|ref|ZP_06272490.1| Endonuclease/exonuclease/phosphatase [Streptomyces sp. ACTE]
 gi|282561766|gb|EFB67309.1| Endonuclease/exonuclease/phosphatase [Streptomyces sp. ACTE]
          Length = 285

 Score = 52.9 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 35/275 (12%), Positives = 78/275 (28%), Gaps = 42/275 (15%)

Query: 4   VTVATWNVN-SIRARIHNLAAW------IKENNPDIICLQET------KTEDKNFPFETL 50
           + VAT+N++    A +  +         ++    D+I LQE       ++E ++   E  
Sbjct: 36  LRVATYNIHAG--AGMDGVFDLDRQAAQLRALGADVIGLQEVDAHWGARSEWRDLASELA 93

Query: 51  QSLNYHIET--CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108
           + L+ ++            V    +   + +++     D +       +T   +      
Sbjct: 94  ERLHMNVSFAPVYSLDPVAVGEPRREFGVAVLSRYRILDAENHEITRLSTQDPDPVPAPA 153

Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168
                                   R                 A    I+ +       + 
Sbjct: 154 PGFGEVLLRVRGLPVRVYVTHLDYRPDPSVRTV-------QVAETRRIMARDRGHRILLG 206

Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
             N      E+   +++L +                 +F      +   N   RID + +
Sbjct: 207 DFNATPDAPELAPLWKELTDAD-----------PGAPTF----PAADPVN---RIDFVAV 248

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           S    +     R+       T  SDH P++  L++
Sbjct: 249 SKAGRTGAGQVRVREAAVAETLASDHRPLVADLEL 283


>gi|228919300|ref|ZP_04082670.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|228840407|gb|EEM85678.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
          Length = 272

 Score = 52.9 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 34/271 (12%), Positives = 63/271 (23%), Gaps = 19/271 (7%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET--KTEDK----NFPFETLQS 52
           + + T N +S +      +I  LA  I+E   D+I LQE     + +    N   +    
Sbjct: 1   MKLLTLNCHSWQEENQIEKIQYLAKVIQEEEYDVIALQEVSQSIQAEIVCGNKKEDNFGL 60

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           L              +     +   ++                +  F    +        
Sbjct: 61  LLLEELKELHVKDYNITWDFSHIGYDVYEEGLAIITKHNIIKEDTFFISENEDTTYWKTR 120

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                 +     D              +     +        +         +       
Sbjct: 121 KIVSTTLAYNGKDITFYSCHLGWWNDEEESFKGQVDRLMERVDSNKLAFLMGDFNNNARL 180

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                E                           + WD           +RID I+ +   
Sbjct: 181 KGEGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWD------ENKHSLRIDLILCNQS- 233

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              +HS+++          SDH  V V LDI
Sbjct: 234 -KKVHSSKVIFNGTNRNVISDHFGVEVQLDI 263


>gi|218961593|ref|YP_001741368.1| hypothetical protein; putative signal peptide [Candidatus
           Cloacamonas acidaminovorans]
 gi|167730250|emb|CAO81162.1| hypothetical protein; putative signal peptide [Candidatus
           Cloacamonas acidaminovorans]
          Length = 302

 Score = 52.9 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 32/276 (11%), Positives = 65/276 (23%), Gaps = 33/276 (11%)

Query: 2   SVVTVATWNVNSIRARIHN-----LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56
           + + V TWN   +R          L   I   N ++I  QE    D N   +  + + Y+
Sbjct: 42  NTLDVITWN---LRNFPEGTDLTTLKEMISALNAEVIAFQEI--MDYNAFMDLAEDIPYY 96

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                  +               + +      +    F           +        + 
Sbjct: 97  AACVYSATDTYRLAYLYDTRSVTLNNQYTIFENDSNPFPRP------PYILDITWNNSNY 150

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
             I +       ++I     +  +              +               +     
Sbjct: 151 FIINNHFKAYGDNYIDESDSWDEEMRRRLACQKLDNYISTSLSDKKVIVLGDLNDQIAEP 210

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
            +       L                  YS   Y +          IDHI+++ E     
Sbjct: 211 EDYNVFLSFLNKPEEYYFADMPIALSPTYSNVSYPS------SLSHIDHILITNELFEDF 264

Query: 237 HSA-----------RIDTKPRGWTKPSDHTPVIVSL 261
            +A            + +     +  SDH PV + +
Sbjct: 265 ENAGSYCRTILAENWMLSWNTYSSTISDHRPVGIRI 300


>gi|225159097|ref|ZP_03725404.1| endonuclease/exonuclease/phosphatase [Opitutaceae bacterium TAV2]
 gi|224802303|gb|EEG20568.1| endonuclease/exonuclease/phosphatase [Opitutaceae bacterium TAV2]
          Length = 262

 Score = 52.9 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 40/287 (13%), Positives = 78/287 (27%), Gaps = 51/287 (17%)

Query: 1   MS-VVTVATWNVN---SI---------RARIHNLAA---WIKENNPDIICLQETKTEDK- 43
           MS  + + T+N+     +         R    NL      +    PDI+ LQE    D+ 
Sbjct: 1   MSQPLRIVTYNIAHGRGLAPIQGFSSKRQVRRNLLKISCLLANLKPDIVALQEI---DEN 57

Query: 44  -----NFP-FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA 97
                NF   E L+                  + +      I++  P  + +  A     
Sbjct: 58  SRWAGNFDHLELLRRAGRFKYAVFGVHNRREGLFNLNYGNAILSRHPILEWETTAFGSSK 117

Query: 98  TFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII 157
                   + I         P+ +     +    +                     + + 
Sbjct: 118 VGEKGFLFVEIDIG--GRRVPVVNLHLHYRSRRHRLDQVDKVFDYLEARQKTTGPGWAMP 175

Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK 217
           P     +N      DA  +L  + +      +         H      +F      S S 
Sbjct: 176 PVVCGDFNAADSPQDATASLLSQLNHFGGYAL---------HPLDGKRTFPSPLP-SRS- 224

Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
                +D +++       +  + +          SDH PV+V + +P
Sbjct: 225 -----LDFVLVPE--KQQVTKSEVVRSYL-----SDHRPVMVEMAVP 259


>gi|221068931|ref|ZP_03545036.1| Endonuclease/exonuclease/phosphatase [Comamonas testosteroni KF-1]
 gi|220713954|gb|EED69322.1| Endonuclease/exonuclease/phosphatase [Comamonas testosteroni KF-1]
          Length = 254

 Score = 52.9 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 43/284 (15%), Positives = 86/284 (30%), Gaps = 66/284 (23%)

Query: 3   VVTVATWNVN----SI----RARIHNLAAWIKENNPDIICLQET-KTE--DKNF------ 45
           ++ VAT+N++     +    R  IHNL   +++ + DI+CLQE  K    ++ +      
Sbjct: 14  ILRVATYNIHKGVQGLGPARRLEIHNLGLAVEQLDADIVCLQEVRKMNRKEEQYFDRWPN 73

Query: 46  --PFETLQSLNYHIET----CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF 99
               E L    Y          +   +G A+LS++  I        D    Q   +    
Sbjct: 74  VPQAEYLAPEGYESVYLTNAYTRDGEHGNALLSRWPVIGYQHEDISDHRFEQRGLLHVEL 133

Query: 100 TINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159
            I+ + +    ++L         +      +I+R +   +  +   +   +         
Sbjct: 134 DIHGKRVHSIVVHLGLIPGSRVRQIALLQRFIEREVPPNAPLVVAGDFNDW--------- 184

Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK 219
                       +    +       + +         +                      
Sbjct: 185 -----------GNQIKRMLAGFGLFEYEETQGILTYPSRLPIAQ---------------- 217

Query: 220 GIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              +DHI +    T L        K R W + SDH P+I    +
Sbjct: 218 ---LDHIYV-RGLTPLGLQV---PKGRIWWRMSDHLPLIAEFKL 254


>gi|326335669|ref|ZP_08201855.1| endonuclease/exonuclease/phosphatase [Capnocytophaga sp. oral taxon
           338 str. F0234]
 gi|325692098|gb|EGD34051.1| endonuclease/exonuclease/phosphatase [Capnocytophaga sp. oral taxon
           338 str. F0234]
          Length = 253

 Score = 52.9 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 45/276 (16%), Positives = 75/276 (27%), Gaps = 38/276 (13%)

Query: 3   VVTVATWNVNSIRARIHN-------LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55
           +  +ATWNV     R          +   IKE N DI+ L E      +     L   + 
Sbjct: 1   MYKIATWNV----ERPKKGTEKTALVMEEIKEVNADILVLTE---SAVSISLAELYPFSI 53

Query: 56  HI-ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           H          + V+I SK++  + +                    I   T+   +    
Sbjct: 54  HSLAYERTPEEHWVSIFSKWKITKQIETFDNFRTTCAVVETPFGKVIVFGTIIPYHQAGV 113

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQR----LELEEPLIFAGDYNIIPQPHDCYNPIIWE 170
            G       Y       K   + A +      +   P++  GD+N     +  Y      
Sbjct: 114 SGVRYGCLGYKQWEYHEKDLHQQAKEWGRILEQEGLPILIKGDFNQSRYNNQGYGTEKVR 173

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230
                 L         +    +                        +N    IDHI +S 
Sbjct: 174 QILSDYLSQLDLTCITECDLSSFLHIDPIKHKV-------------RNN---IDHICISN 217

Query: 231 EATSLLHSARI---DTKPRGWTKPSDHTPVIVSLDI 263
                +   ++   D         SDH  V VS ++
Sbjct: 218 SLIRKVKGYQVGAWDHFSEEGKYMSDHNGVFVSFEM 253


>gi|261219142|ref|ZP_05933423.1| endonuclease/exonuclease/phosphatase [Brucella ceti M13/05/1]
 gi|261322204|ref|ZP_05961401.1| endonuclease/exonuclease/phosphatase [Brucella ceti M644/93/1]
 gi|260924231|gb|EEX90799.1| endonuclease/exonuclease/phosphatase [Brucella ceti M13/05/1]
 gi|261294894|gb|EEX98390.1| endonuclease/exonuclease/phosphatase [Brucella ceti M644/93/1]
          Length = 310

 Score = 52.9 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 42/309 (13%), Positives = 78/309 (25%), Gaps = 75/309 (24%)

Query: 25  IKENNPDIICLQETKTEDKNFPFETLQ--------SLNYHIETCGQKSYNGVAILSKYQP 76
           I E   DI+CLQE    D        +           Y  +     + +    ++    
Sbjct: 6   IAETRADILCLQEV---DNLAALNAFEYGYLFKMIGYGYRHKYLIDGNDSRGIDVAVMMR 62

Query: 77  IEIVTHLPG------------------------------DDLDVQARFIEATFTINTQTL 106
                  P                                D   +   +     I  + L
Sbjct: 63  DTTRDGQPIEVNEVTSHAHLTYSDFGIYQPELAELGLEPHDRIFKRDCLNVDLRIGGEPL 122

Query: 107 RIGNLYLPHGNPI----------TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI 156
            +   +L   +               +  +  +  +            E   +  GD+N 
Sbjct: 123 SLFVAHLKSMSGARNGQDGRTSSHPVRLAEARAIRRIIEEKFGIDRVTERRWLICGDFND 182

Query: 157 IPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS 216
             +            +    +E   +   L   GF   +         ++ +        
Sbjct: 183 YRERILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDRWTLYHTRGPLER 242

Query: 217 KNKGIRIDHIMLSPEATSLLHSA-------------------RIDTKPR-GWTKP--SDH 254
                ++D+IM SP   +    A                    +D  PR GW +P  SDH
Sbjct: 243 --HLCQLDYIMASPAFAAKNEHAVPDIIRRGQPWRTIFPPEQNVDRYPRTGWDRPKASDH 300

Query: 255 TPVIVSLDI 263
            PV V+L++
Sbjct: 301 CPVSVTLNM 309


>gi|220929233|ref|YP_002506142.1| endonuclease/exonuclease/phosphatase [Clostridium cellulolyticum
           H10]
 gi|219999561|gb|ACL76162.1| Endonuclease/exonuclease/phosphatase [Clostridium cellulolyticum
           H10]
          Length = 366

 Score = 52.9 bits (125), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 47/277 (16%), Positives = 75/277 (27%), Gaps = 38/277 (13%)

Query: 2   SVVTVATWNVNSIRAR-----IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56
           S + V  WN N               ++IK+ + D+  LQE               L+Y 
Sbjct: 101 SPIKVICWNTN---LWDQDKDKDEFYSFIKKQDADVYLLQE--------------YLHYQ 143

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
            E    + Y    I+  +    +              +  +T        R         
Sbjct: 144 TEKDSGQPYRLCNIVPGFPLHYMHFDDSERIRKEFPGYYFSTNNQFVIISRFPIKKSYTD 203

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ------PHDCYNPIIWE 170
                T  D  I+            L +E        +                N     
Sbjct: 204 YSEQYTVSDVNINGRNVRFYNVHMLLHIETTNPLKPYFYDALHRRFLAREIGFKNLKRDL 263

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF----WDYYADSWSKNKGIRIDHI 226
            +      V   F   + MG  D +   H     YS       Y    +      RID  
Sbjct: 264 RNEKSDYFVAGDFNSTKAMGVMDDLLKDHIDGVRYSNDILPLSYQLYGFKL---WRIDFA 320

Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +L P+A   +   +         K SDH P+++SLD+
Sbjct: 321 IL-PKANDNIR-FKTYKTI-SPDKLSDHDPIVLSLDV 354


>gi|282866534|ref|ZP_06275577.1| Endonuclease/exonuclease/phosphatase [Streptomyces sp. ACTE]
 gi|282558581|gb|EFB64140.1| Endonuclease/exonuclease/phosphatase [Streptomyces sp. ACTE]
          Length = 322

 Score = 52.5 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 35/297 (11%), Positives = 63/297 (21%), Gaps = 57/297 (19%)

Query: 2   SVVTVATWNV-----------------NSIRARIHNLAAWIKENNPDIICLQETKTEDKN 44
           +V+ V TWNV                 NS   ++  +     E + D+I LQE       
Sbjct: 42  TVLRVVTWNVCGEAGGKRGEAGYCPYRNSPAEKVEQITELAHERDADVIALQEICGGAAG 101

Query: 45  FPFETLQ-SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
                L+ +L               A  ++              L V            +
Sbjct: 102 SHLSLLRTALGPEWSVRR-------AEGARPDGRTRCRGGLSGHLGVAIAVRGKVVGARS 154

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
           + +   +        +                       E        G  + + Q    
Sbjct: 155 RNVLPPDPAGHSHETLPVLCVRVSGWSYTPCTTHILPGEEPRVLEQITGVRDFVRQEDRP 214

Query: 164 Y----NPIIWENDACFTLEVRQSFQKLQNMGFTD---AIRATHDTHHLYSFWDYYADSWS 216
                +       A          +    +G                 +SF         
Sbjct: 215 TVLTGDFNRNSGAAQLKPLASAFTECPGLLGTGQGTSTYHQWMPAEGTHSFHT------- 267

Query: 217 KNKGIRIDHIMLSPEATSLL--HSARIDTKPRGW----------TKPSDHTPVIVSL 261
                 +DH+ +S  +          +D                   SDH PV   +
Sbjct: 268 ------LDHVFVSKASEVRAPFARCGVDRDRMDTTPNEAGGVEPDGYSDHAPVFADI 318


>gi|255721545|ref|XP_002545707.1| hypothetical protein CTRG_00488 [Candida tropicalis MYA-3404]
 gi|240136196|gb|EER35749.1| hypothetical protein CTRG_00488 [Candida tropicalis MYA-3404]
          Length = 350

 Score = 52.5 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 33/260 (12%), Positives = 68/260 (26%), Gaps = 35/260 (13%)

Query: 30  PDIICLQET---KTEDKNFPFETLQSLNYHIETCGQKSYNGVA--ILSKYQPIEIVTHLP 84
            +IICLQE    + +D        +  +Y          +G    IL K    +I+    
Sbjct: 103 ANIICLQEVLHNQLQDILNGLNEFEEWSYFGVGRTDGKTSGEYAPILYKKSEFDILDSKT 162

Query: 85  GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL 144
                   +  +       + + +          I    ++          R  S     
Sbjct: 163 FWLSPTPDKPSKGWDAALERIVTVVTFQSKSSPSIRFNVFNTHYDHRGVVARRESSLFIA 222

Query: 145 EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL 204
           ++   +          +  +       +              ++       + ++  +  
Sbjct: 223 DKLKNY--------NEYPSFLAGDLNTEPTDEPHSILESSGFKDSFKLIGKKYSYGYNTS 274

Query: 205 YSFWDYYADSWSKNKGIRIDHIM-----------------LSPEATSLLHSARIDTKPRG 247
           ++ +D            RID+I                   S      L S  I +    
Sbjct: 275 FTGFD-----KDNEPVSRIDYIWSPSYTTFDVGHESSKDEASNRFGVSLKSFGIVSNWFN 329

Query: 248 WTKPSDHTPVIVSLDIPEPR 267
               SDH PV+ + +I  PR
Sbjct: 330 GNFFSDHRPVVATYEISRPR 349


>gi|229171215|ref|ZP_04298808.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus MM3]
 gi|228612295|gb|EEK69524.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus MM3]
          Length = 263

 Score = 52.5 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 33/271 (12%), Positives = 63/271 (23%), Gaps = 19/271 (7%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET--KTEDKNFP----FETLQS 52
           + + T N +S +      +I  LA  I+E   D+I LQE     +  N       +    
Sbjct: 1   MKLLTLNCHSWQEENQMEKIKYLAKVIQEEEYDVIALQEVSQSIQAGNVCGNKKEDNFGL 60

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           L              +     +   ++                +  F    +        
Sbjct: 61  LLLEELKALHVKDYNITWDFSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTTYWKTR 120

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                 I     +              +    ++     G  +         +       
Sbjct: 121 KIVSATIAYNDKNITFYSCHLGWWNDEEESFKDQVNRLMGRVDSNELSFLMGDFNNNARL 180

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                E                           + WD           +RID I+ +   
Sbjct: 181 QGEGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWD------ENKHNLRIDLILCNQS- 233

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              + S+++          SDH  V V +DI
Sbjct: 234 -EKVRSSKVIFNGTNRNVISDHFGVEVQVDI 263


>gi|134096002|ref|YP_001101077.1| DNase [Herminiimonas arsenicoxydans]
 gi|133739905|emb|CAL62956.1| Putative endonuclease/exonuclease/phosphatase family protein
           [Herminiimonas arsenicoxydans]
          Length = 264

 Score = 52.5 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 37/282 (13%), Positives = 79/282 (28%), Gaps = 43/282 (15%)

Query: 4   VTVATWNVN------SIRARIHNLAAWIKENNPDIICLQET----------KTED----- 42
           + + T+N++        R RIH L   I     D++ LQE              D     
Sbjct: 3   LRITTYNIHKGVSSFGARPRIHALKQAINAMQSDVLFLQEVQGRHDLHALKHATDWPELS 62

Query: 43  -KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI 101
            ++F         Y +       ++G A+LS +  +        D        +      
Sbjct: 63  QQDFLAGDSHQCAYGMNAVYDHGHHGNALLSCFPILSSRNQNISDHKYESRGILHCVVRA 122

Query: 102 NTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161
               +    ++L         +    I  +       +  +   +   +    +   +  
Sbjct: 123 PEAEVHCFVIHLGLFAGSRKRQTAALIEAVSASAESGAPIIIAGDFNDWGNRLSEELRDT 182

Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI 221
                +   N +          ++L   G       T      +               +
Sbjct: 183 LGVTEVFDANLSRRG--FGTYLRQLSGRGTKIQPARTFPAAMPF---------------L 225

Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           ++D I +       + SA +      W K SDH P++ +L +
Sbjct: 226 QLDRIYV-RGF--KVESAEVLHGAM-WGKLSDHAPIVANLQL 263


>gi|242043562|ref|XP_002459652.1| hypothetical protein SORBIDRAFT_02g008042 [Sorghum bicolor]
 gi|241923029|gb|EER96173.1| hypothetical protein SORBIDRAFT_02g008042 [Sorghum bicolor]
          Length = 593

 Score = 52.5 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 38/261 (14%), Positives = 85/261 (32%), Gaps = 34/261 (13%)

Query: 4   VTVATWNVNSI--RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           +    WN+  I   +R   +  +I+E+N  ++ +QET  ++     + L+     + +  
Sbjct: 1   MRFLFWNIRGIGKSSRKRQVREFIEEHNLQVVGIQET-IKESFSDGDLLELAGNKVFSWK 59

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
             +  G +        +    +   D+      +           R  N           
Sbjct: 60  WSAAKGKSGGILMGVNQEKLEMEACDILEYCVVMTIRN-------RFSNFRWVMVTVYGP 112

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            +++    ++        Q +    P+I  GD+N+I +  D  +  +  +          
Sbjct: 113 VQHEYSGDFLAELDSVCQQTV---LPIIIGGDFNLIREESDKNSDNVNFHLMDQFNTFIG 169

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL--LHSA 239
             Q          +R    +   Y++ +  +     N    +D ++ S        L  +
Sbjct: 170 DHQ----------LRELKRSGQRYTWTNKQSKPIMVN----LDRVLFSSGWEEKYPLSLS 215

Query: 240 RIDTKPRGWTKPSDHTPVIVS 260
              T+       SDH+PVIV 
Sbjct: 216 WCLTRV-----GSDHSPVIVD 231


>gi|323494918|ref|ZP_08100010.1| putative phospholipase C [Vibrio brasiliensis LMG 20546]
 gi|323310882|gb|EGA64054.1| putative phospholipase C [Vibrio brasiliensis LMG 20546]
          Length = 441

 Score = 52.5 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 38/287 (13%), Positives = 82/287 (28%), Gaps = 47/287 (16%)

Query: 2   SVVTVATWNVNSIRA-------RIHNLAAWIKENNPDIICLQETKTE-DKNFPFETLQSL 53
           + + + T+N+ ++ A       R   +  ++K    D++ LQE       +F  E  +  
Sbjct: 176 NTLKMMTYNIWALTAIASHIEDRYQLIPEYVK--GYDVLALQEVFASGRDSFLRELAKEY 233

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
            Y  +   +  +N             + +                         I     
Sbjct: 234 PYQTKMLDKDGFNIHDGGVMIVSRYPIVNQAQYVFPDCTGTDCFADKGVNYAEIIK---- 289

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
                     +    +          ++ + ++    A   NI       Y+     N  
Sbjct: 290 ---GGKAYHIFATHTASYDTDTARDYRQRQFKQMRQLALSLNISQNETVVYSGDFNVNK- 345

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYS--FWDYYADSWS-------KNKGIRID 224
                                + A    +  Y+   +D   + ++       +N    +D
Sbjct: 346 --------RKFPGDYQQMITNLSAIEPDYSGYTESTFDPRINDFAGEAMSGGENVEY-LD 396

Query: 225 HIMLSPEATSLLHSA---RID----TKPRGWTK--PSDHTPVIVSLD 262
           ++M+S E    + S+   R+D    T  R W     SDH PV   ++
Sbjct: 397 YVMVSNE--YQIKSSNDNRVDVPRSTGERLWKHYNLSDHFPVTAVIE 441


>gi|317495840|ref|ZP_07954203.1| endonuclease/Exonuclease/phosphatase [Gemella moribillum M424]
 gi|316914017|gb|EFV35500.1| endonuclease/Exonuclease/phosphatase [Gemella moribillum M424]
          Length = 696

 Score = 52.5 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 14/85 (16%)

Query: 199 HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT---KPSDHT 255
           HD    YS++ Y   + S      +D+I++S      +  + +           + SDH 
Sbjct: 565 HDAGDRYSYF-YRGSNQS------LDNILVSKNIKDKVVFSPVHINASFMEEHGRASDHD 617

Query: 256 PVIVSLDIPEPRKKQQDSTSQNMKP 280
           PV+V +D  +P+     ST+  +KP
Sbjct: 618 PVVVQIDFSKPK----QSTTPEVKP 638


>gi|224367710|ref|YP_002601873.1| hypothetical protein HRM2_05950 [Desulfobacterium autotrophicum
           HRM2]
 gi|223690426|gb|ACN13709.1| conserved hypothetical protein [Desulfobacterium autotrophicum
           HRM2]
          Length = 253

 Score = 52.5 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 31/245 (12%), Positives = 54/245 (22%), Gaps = 22/245 (8%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQP 76
           R        +   PD +  QE      +F    L    +                  +Q 
Sbjct: 29  RKKGYPLLFEHYQPDFVGFQEVNNFQADFLCRLLDGYGF--------IGRRDTSPELWQN 80

Query: 77  IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
             I              F+  T              L                     + 
Sbjct: 81  NLIFYRKQWTCKAANHLFLSRTPQ--------KESRLDGSRWPRQCTLGQFEQGDMAVVM 132

Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIR 196
             +     E     +    +          +                     +   +   
Sbjct: 133 ANTHFDFAETVQALSAGLVVDFLSEFSPGSLTDLPTVITGDFNSIPGGAAHRVFLDNGFE 192

Query: 197 ATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTP 256
              +  H Y+F  +      K++G  ID I+     T L  + +I  +      PSDH P
Sbjct: 193 DAFENAHAYTFHGFTG----KDRGGHIDWILYRGGITPL--NQKIVRERFSGHFPSDHFP 246

Query: 257 VIVSL 261
           V+V  
Sbjct: 247 VLVEF 251


>gi|326430956|gb|EGD76526.1| hypothetical protein PTSG_07643 [Salpingoeca sp. ATCC 50818]
          Length = 291

 Score = 52.5 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 43/262 (16%), Positives = 72/262 (27%), Gaps = 28/262 (10%)

Query: 21  LAAWIKENNPD-IICLQET-KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIE 78
           +A  +     D IICLQE   +    F     +   Y           GVAI      I 
Sbjct: 37  VAELLDLMESDSIICLQEVDHSWFGKFVL-LFEKEGYTFVPVTYSPLLGVAIAFPRARIG 95

Query: 79  IVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN-----------PITSTKYDDK 127
            +         +               + +                         +    
Sbjct: 96  DLIPDCIGVRSISKLRDSTITAKRCWNVALQVHLTRSSGKGQDFAVTTYHMPCKFREPHV 155

Query: 128 ISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP--HDCYNPIIWENDACFTLEVRQSFQK 185
           ++     L   +       P I AGD+NI P+   +D         +    L    +   
Sbjct: 156 MAMHCSMLVKWAHNTANSLPYIVAGDFNIKPKDPCYDMIVNGFIHPEVKGALATPAATFN 215

Query: 186 LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKP 245
                   A+R  H     ++ W +            +D+I LS E      +   ++ P
Sbjct: 216 EVPKALRSALREHHGREPEFTNWTHEFQDT-------LDYIFLSDEWVVR-DACDPESFP 267

Query: 246 RG----WTKPSDHTPVIVSLDI 263
            G        SDH P+  +LD+
Sbjct: 268 EGPYPSERVVSDHIPLWATLDL 289


>gi|29893671|gb|AAP06925.1| putative reverse transcriptase [Oryza sativa Japonica Group]
 gi|108707404|gb|ABF95199.1| retrotransposon protein, putative, LINE subclass [Oryza sativa
           Japonica Group]
          Length = 870

 Score = 52.5 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 34/271 (12%), Positives = 81/271 (29%), Gaps = 34/271 (12%)

Query: 6   VATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +WNV  +   AR + +   + +    + C QETK +  +          Y ++    K
Sbjct: 7   LISWNVRGLNSPARCNAVHELMLDTKCTLACFQETKLQSIDDGLARFLG-GYKLDKFAFK 65

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
              G               +    +   +   + T   +  T  +  +Y P  + +  + 
Sbjct: 66  PARGTRGGILLLWSSGDFDVQEVRIGRFSISAQITDIRSGVTFLLTGVYGPTRHHLKDSF 125

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
                                           +I    +       +N++   L   + F
Sbjct: 126 LRHIRRLRPSPGEGW-----------------LILGDFNMIYRARDKNNSNLNLARMRRF 168

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + + +      I   +     +++    ++   K   +++D    + E         +  
Sbjct: 169 RAVIDRCELHEIPLQN---RKFTW----SNERRKATLVKLDRCFCNEEWDLAFPHHVLHA 221

Query: 244 KPRGWTKPSDHTPVIVSLDIPEPRKKQQDST 274
            P G   PSDH P++    +  P+   +  T
Sbjct: 222 LPTG---PSDHCPLV----LSNPQGPHRPRT 245


>gi|296269289|ref|YP_003651921.1| endonuclease/exonuclease/phosphatase [Thermobispora bispora DSM
          43833]
 gi|296092076|gb|ADG88028.1| Endonuclease/exonuclease/phosphatase [Thermobispora bispora DSM
          43833]
          Length = 246

 Score = 52.5 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 16/35 (45%), Positives = 22/35 (62%)

Query: 3  VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQE 37
          ++ VAT+NV S+R     L   IK   PD++CLQE
Sbjct: 1  MLRVATYNVRSLRDDRAALVRMIKALRPDVLCLQE 35



 Score = 39.0 bits (89), Expect = 0.77,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 3/41 (7%)

Query: 222 RIDHIMLSPEATSLLHSARIDTKP-RGWTKPSDHTPVIVSL 261
           RID I         + S  +  +P     + SDH PV+  L
Sbjct: 188 RIDGIFADRGL--RVVSCAVAAEPIHDVVRASDHRPVVAVL 226


>gi|264676938|ref|YP_003276844.1| endonuclease/exonuclease/phosphatase [Comamonas testosteroni CNB-2]
 gi|299531500|ref|ZP_07044906.1| endonuclease/exonuclease/phosphatase [Comamonas testosteroni S44]
 gi|262207450|gb|ACY31548.1| endonuclease/exonuclease/phosphatase [Comamonas testosteroni CNB-2]
 gi|298720463|gb|EFI61414.1| endonuclease/exonuclease/phosphatase [Comamonas testosteroni S44]
          Length = 254

 Score = 52.5 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 43/284 (15%), Positives = 86/284 (30%), Gaps = 66/284 (23%)

Query: 3   VVTVATWNVN----SI----RARIHNLAAWIKENNPDIICLQET-KTE--DKNF------ 45
           ++ VAT+N++     +    R  IHNL   +++ + DI+CLQE  K    ++ +      
Sbjct: 14  ILRVATYNIHKGVQGLGPARRLEIHNLGLAVEQLDADIVCLQEVRKMNRKEEQYFDRWPN 73

Query: 46  --PFETLQSLNYHIET----CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF 99
               E L    Y          +   +G A+LS++  I        D    Q   +    
Sbjct: 74  VPQAEYLAPEGYESVYLTNAYTRDGEHGNALLSRWPVIGYQHEDISDHRFEQRGLLHVEL 133

Query: 100 TINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159
            I+ + +    ++L         +      +I+R +   +  +   +   +         
Sbjct: 134 DIHGKRVHSIVVHLGLIPGSRIRQIALLQRFIEREVPPNAPLVVAGDFNDW--------- 184

Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK 219
                       +    +       + +         +                      
Sbjct: 185 -----------GNQIKRMLAGFGLFEYEETQGILTYPSRLPIAQ---------------- 217

Query: 220 GIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              +DHI +    T L        K R W + SDH P+I    +
Sbjct: 218 ---LDHIYV-RGLTPLGLQV---PKGRIWWRMSDHLPLIAEFKL 254


>gi|116310953|emb|CAH67890.1| OSIGBa0153E02-OSIGBa0093I20.19 [Oryza sativa Indica Group]
          Length = 1752

 Score = 52.5 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 39/271 (14%), Positives = 77/271 (28%), Gaps = 34/271 (12%)

Query: 6   VATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
             +WNV  +   AR + +   + +   ++ CLQETK ++ +          Y ++    K
Sbjct: 615 FISWNVRGLNSPARCNTVHEMMLDTKCNLACLQETKLQNIDDGLARFLG-GYKLDIFAFK 673

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
              G               L    +       + T  +   T  +  +Y P  + +  + 
Sbjct: 674 PATGTRGGILILWNSAALVLQDIRISRFLISAQVTVPLTGATFLMTGVYGPTRHRLKDSF 733

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
                                 E  +  GD+NII +  D  N  +               
Sbjct: 734 LRHIRRLKP----------NAGEGWLLFGDFNIIYRARDKNNGNLNLARMRRFRATIDRC 783

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           +  +          +++       W              +D    +       H   +  
Sbjct: 784 ELHEIPLQNRRFTWSNERQ-----WPTLVK---------LDRCFCNENWDLAFHHHVLHA 829

Query: 244 KPRGWTKPSDHTPVIVSLDIPEPRKKQQDST 274
            P G   PSDH P++    +  P   ++  T
Sbjct: 830 LPTG---PSDHCPLV----LSNPAAPRKPRT 853


>gi|323450905|gb|EGB06784.1| hypothetical protein AURANDRAFT_71945 [Aureococcus anophagefferens]
          Length = 1309

 Score = 52.5 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 40/340 (11%), Positives = 81/340 (23%), Gaps = 85/340 (25%)

Query: 5   TVATWNVNSIRARIHN----LAAWIKENNPDIICLQET---------------------- 38
           T+  WNV ++++R       +  ++     D++ L E                       
Sbjct: 29  TIICWNVENLKSRATQNRREVRDFLGACGADVVFLSEVKLAAHCDKGAKKGDGAPRNRRR 88

Query: 39  ---KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSK--------YQPIEIVTHLPGDD 87
              K  D       L  +          +    A             + +      P   
Sbjct: 89  VNDKFHDDKVQCAALLDVGPFAAPIYSLADWRYAGTCCLLRSDGPAPRRVSFSLEPPDAP 148

Query: 88  LDVQARFIEATFTINTQTLRIGN------LYLPHGNPITSTKYDDKISWIKRFLRFASQR 141
               +         + + + +              N   +  ++ +  W  +   FA   
Sbjct: 149 PARNSVAFADDHDPDGRVIVLEYETLVVLHTYSPNNGNDAKSFERRRLWEAKVRAFAEAV 208

Query: 142 LELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT 201
                 L++ GD N  P   D  +P  +          R    + +     +        
Sbjct: 209 RVRGRSLVYVGDLNCAPTDDDLSHPAWFRAWNSNQPGKRLGKDRERLEADDEGQPGCTPR 268

Query: 202 HHLY-------------------------S----FWDYYAD---------SWSKNKGIRI 223
              Y                         +     + +                 KG+RI
Sbjct: 269 ESRYFDALLRAGGLFDAFRDARGAGAGAATIEGPHFSWRGPPGRDGLPETGRYYGKGMRI 328

Query: 224 DHIMLSPEATSLLHSARID-TKP-RGWTKPSDHTPVIVSL 261
           DH ++S      + S  +      R     SDH P+ + L
Sbjct: 329 DHALVSTGVA--VESCDLLGRGVGRDGFMGSDHCPLRLVL 366


>gi|116311038|emb|CAH67969.1| OSIGBa0142I02-OSIGBa0101B20.12 [Oryza sativa Indica Group]
          Length = 1230

 Score = 52.5 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 34/264 (12%), Positives = 71/264 (26%), Gaps = 36/264 (13%)

Query: 15  RARIHNLA----AWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAI 70
           R R  +L      ++ E N  I C QETK    +       S  Y +++   K   G  +
Sbjct: 303 RQRAPHLTCAVHNFMAETNCTIACFQETKLRAMDDGLARFLS-GYKLDSYAIKPARGTRV 361

Query: 71  LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISW 130
                    +  +    L   +         N++T  I  +Y P  +             
Sbjct: 362 GILLMWNSNLVDINEVRLRRFSMIARVNLLHNSETFFITAVYGPTTHREKYAFLRQIKRL 421

Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG 190
                       +                            D        +     +   
Sbjct: 422 KPADREPWLLFGDFNMIYRAC--------------------DKNNNNLNLRRMGHFRAAL 461

Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
               ++  H  +  +++    ++   K   +R+D    +     L     I       T 
Sbjct: 462 EHCELKEVHLQNRRFTW----SNERRKPTLVRLDRFYCNENW-DLGFGHHILHALSSGT- 515

Query: 251 PSDHTPVIVSLDIPEPRKKQQDST 274
            SDH P++++     P+  ++  +
Sbjct: 516 -SDHCPLLLT----NPQGPRRPRS 534


>gi|229154133|ref|ZP_04282258.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus ATCC 4342]
 gi|228629413|gb|EEK86115.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus ATCC 4342]
          Length = 263

 Score = 52.5 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 33/271 (12%), Positives = 61/271 (22%), Gaps = 19/271 (7%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET------KTEDKNFPFETLQS 52
           + + T N +S +      +I  LA  I+E   D+I LQE       K    N   +    
Sbjct: 1   MKLLTLNCHSWQEENQIEKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGL 60

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           L              +     +   ++                +  F    +        
Sbjct: 61  LLLEELKALHVKDYNITWDFSHIGYDVYEEGLAIVTKHNVIKEDTFFISENKDTAYWKTR 120

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                 I     +              +     +        +         +       
Sbjct: 121 KIVSATIAYNGKNITFYSCHLGWWNDEEESFGGQVNRLMERVDSNELSFLMGDFNNNARL 180

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                E                           + WD           +RID I+ +   
Sbjct: 181 QGEGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWD------ENKHNLRIDLILCNRS- 233

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              + S+++          SDH  V V +DI
Sbjct: 234 -EKVRSSKVIFNGTNRNIISDHFGVEVQVDI 263


>gi|58532125|emb|CAE04127.3| OSJNBa0009P12.14 [Oryza sativa Japonica Group]
          Length = 1206

 Score = 52.5 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 34/264 (12%), Positives = 71/264 (26%), Gaps = 36/264 (13%)

Query: 15  RARIHNLA----AWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAI 70
           R R  +L      ++ E N  I C QETK    +       S  Y +++   K   G  +
Sbjct: 279 RQRAPHLTCAVHNFMAETNCTIACFQETKLRAMDDGLARFLS-GYKLDSYAIKPARGTRV 337

Query: 71  LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISW 130
                    +  +    L   +         N++T  I  +Y P  +             
Sbjct: 338 GILLMWNSNLVDINEVRLRRFSMIARVNLLHNSETFFITAVYGPTTHREKYAFLRQIKRL 397

Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG 190
                       +                            D        +     +   
Sbjct: 398 KPADREPWLLFGDFNMIYRAC--------------------DKNNNNLNLRRMGHFRAAL 437

Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
               ++  H  +  +++    ++   K   +R+D    +     L     I       T 
Sbjct: 438 EHCELKEVHLQNRRFTW----SNERRKPTLVRLDRFYCNENW-DLGFGHHILHALSSGT- 491

Query: 251 PSDHTPVIVSLDIPEPRKKQQDST 274
            SDH P++++     P+  ++  +
Sbjct: 492 -SDHCPLLLT----NPQGPRRPRS 510


>gi|254781003|ref|YP_003065416.1| hypothetical protein CLIBASIA_04520 [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040680|gb|ACT57476.1| hypothetical protein CLIBASIA_04520 [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 304

 Score = 52.5 bits (124), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 40/299 (13%), Positives = 80/299 (26%), Gaps = 59/299 (19%)

Query: 4   VTVATWNVN------SIRARIHNLAA----------WIKENNPDIICLQETKTEDKNFPF 47
           V + +WN+N       +    +++            + K  + DI+ LQE          
Sbjct: 24  VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQE---------- 73

Query: 48  ETLQSLN-YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
                +  Y+               S  + I        +D+       +    +  Q+ 
Sbjct: 74  -----MGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSY 128

Query: 107 RI---GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL-----EEPLIFAGDYNIIP 158
            +    + +   GN        +        L    +                   +   
Sbjct: 129 PLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQA 188

Query: 159 QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFW---DYYADSW 215
           Q    +     E+   F +    + +        D  +       L  F    D   ++ 
Sbjct: 189 QWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNA- 247

Query: 216 SKNKGIR----IDHIMLSPEATSLLHS---ARIDTKP-----RGWTKPSDHTPVIVSLD 262
             NK +R    ID+ ++   A   L     + I         RG  + SDH P+ +  D
Sbjct: 248 --NKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG-KRLSDHCPISIDYD 303


>gi|332022825|gb|EGI63098.1| Putative neutral sphingomyelinase [Acromyrmex echinatior]
          Length = 391

 Score = 52.5 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 47/282 (16%), Positives = 85/282 (30%), Gaps = 40/282 (14%)

Query: 6   VATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDK--NFPFETLQSLNYH 56
           V T N   I         R+  +A        DIICLQE  + +       +  + L + 
Sbjct: 9   VLTLNCWGIPYVSRNKNERMSAIAEKCISREYDIICLQEVWSVNDFNQIKTKVQEVLPHS 68

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT---QTLRIGNLYL 113
                    +G+ ILS+Y   +++ H    +  V        F         +++ N+Y+
Sbjct: 69  HYFHSGVLGSGICILSRYPIHDVMFHKWPLNGYVHKIHHGDWFGGKGVGLCKIKVFNMYI 128

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLI--------FAGDYNIIPQPHDCYN 165
                    +Y+ +           +        +         FAGD N  PQ      
Sbjct: 129 NVYITHLHAEYNRENDEYMAHRVLQAFDTAQFVKMTSGGVDAVIFAGDLNTEPQDLAYRI 188

Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225
                  A    + +      +               + Y+       + ++  G RIDH
Sbjct: 189 IRGVSGLADTCPDSQSHIGTNECAN------------NSYT---SSKLARTQPNGKRIDH 233

Query: 226 I--MLSPEATSLLHSARI---DTKPRGWTKPSDHTPVIVSLD 262
           I  + S      + +      +  P      SDH  V+ +L 
Sbjct: 234 IMYLGSNTVKVEVTNFGHPLPNRVPYKNFSYSDHEAVMATLK 275


>gi|291515956|emb|CBK65166.1| Metal-dependent hydrolase [Alistipes shahii WAL 8301]
          Length = 327

 Score = 52.5 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 79/303 (26%), Gaps = 51/303 (16%)

Query: 2   SVVTVATWNV-NSIRA----RIHNLAAWIKENNPDIICLQETKTEDKNFPF--------- 47
           + + +  WN+ N + +           W++  +PD+ C      E ++            
Sbjct: 34  NNMRLLYWNIQNGMWSGQGDNYDKFVEWVRAYDPDV-C---VWCEAQSIYKTGTADKMDV 89

Query: 48  ----------ETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA 97
                     E      +     G    N   +++   PIE V  + G   D        
Sbjct: 90  ADRYLVGNWGELAARYGHKYWYMGGHRDNYPQVITSKYPIENVERIVGSKPDSVVTHGAG 149

Query: 98  TFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII 157
              I      +  +            ++ K     R      +   +E   I     + +
Sbjct: 150 WARIEKNGKTVNIV--TLHTWPQGYAFEAKDRDASRAENGGDKYRRMEMEYICNHTIHSV 207

Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADS--- 214
           P         +   D          F K         +      H  Y   D  A     
Sbjct: 208 P--GAEKQFWMMMGDFNARSSRDNWFYKYPAGDTRFLVHDYILRHTPY--VDVIAGKYPG 263

Query: 215 -WSKNKG--IRIDHIMLSPEATSLLHSARIDTKPRGWT-----------KPSDHTPVIVS 260
            +    G   RID +  +P     +  A + T                  PSDH P++V 
Sbjct: 264 EFKTTTGGKSRIDFVYCTPPLYERITHADVVTDAYTEPVRDPAKLSNFWHPSDHRPIVVD 323

Query: 261 LDI 263
            ++
Sbjct: 324 FNM 326


>gi|229083666|ref|ZP_04215990.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-44]
 gi|228699629|gb|EEL52290.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-44]
          Length = 263

 Score = 52.5 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 50/288 (17%), Positives = 85/288 (29%), Gaps = 53/288 (18%)

Query: 4   VTVATWNVNS---------IRARIHNLAAWIKENNPDIICLQET----KTED-------K 43
           + + T N +S         IR    +LA  I+E + D+I LQE     K ++        
Sbjct: 1   MKLLTLNCHSWQEENQLEKIR----HLAKTIQEEDYDVIALQEVSQSIKAQNVCDNKKKD 56

Query: 44  NFPFETLQSL------NYHIETCGQKSYNGVA--ILSKYQPIEIVTHLPGDDLDVQARFI 95
           NF    L  L      NY+I          +    ++      IV          Q    
Sbjct: 57  NFGLILLTELEKLGLGNYNIVWDFSHIGYDIYEEGIAIITKYPIVKQGSFFVSASQDTTY 116

Query: 96  EATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYN 155
             T  I   T+      +   +       D++ S+  +  R        E   +     N
Sbjct: 117 WKTRKIVHATISYQGKNITFYSCHLGWWNDEEESFKGQVNRLIEYVNGDELSFLMGDFNN 176

Query: 156 IIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW 215
                 + Y+ +I +          +  +     G                 WD      
Sbjct: 177 NAHLRGEGYDYLIRKGLYDTYELAMEKDEGTTVQGKIAG-------------WD------ 217

Query: 216 SKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              + +RID I  +      + S+++          SDH  V V LD+
Sbjct: 218 ENKQNLRIDLIFTNRP--KKVLSSKVIFNGVNRNVISDHFGVEVQLDM 263


>gi|121595605|ref|YP_987501.1| endonuclease/exonuclease/phosphatase [Acidovorax sp. JS42]
 gi|120607685|gb|ABM43425.1| Endonuclease/exonuclease/phosphatase [Acidovorax sp. JS42]
          Length = 291

 Score = 52.5 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 40/300 (13%), Positives = 74/300 (24%), Gaps = 52/300 (17%)

Query: 4   VTVATWN---VNSIRARIH--NLAAW-IKENNPDIICLQETKT-----------EDKNFP 46
           + + TWN      +  R+    +  + +   + D++CLQE              +     
Sbjct: 1   MQLVTWNTQWCRGLDGRVDPARIVQYALALGDVDVLCLQEIAVNYPGLAGAPGDQVAQVQ 60

Query: 47  FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
                   + +           A   +     I T LP   L            + +   
Sbjct: 61  SAL--PAGWQVFFGAAVDE-WTAAGRQRFGNLIATRLPVLQLQHHPLPYPPDAGVRSMPR 117

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
               L +              + +  +  R A         L         PQ     +P
Sbjct: 118 LCSVLTVQDPALGPVRVMTTHLEYYSKPQRMAQALALRALHLQACAQAAQPPQGLADGSP 177

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI--- 223
              +      +       +     +     A  D     +        W      R+   
Sbjct: 178 FQPKAHTPHAVLCGDFNLQAHEPEYAVLAAALADEEGATAGQAGQPPLWDA---WRLLHP 234

Query: 224 ----------------------DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
                                 D I +S    S + + R+D    G T+ SDH PV++ L
Sbjct: 235 GAPQPPTFCVFDQTYAPQPLACDFIWVSDSLRSRVRAVRVD----GVTQASDHQPVLLEL 290


>gi|229113160|ref|ZP_04242656.1| hypothetical protein bcere0018_53700 [Bacillus cereus Rock1-15]
 gi|228670307|gb|EEL25654.1| hypothetical protein bcere0018_53700 [Bacillus cereus Rock1-15]
 gi|324323750|gb|ADY24794.1| hypothetical protein YBT020_28189 [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 237

 Score = 52.5 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 34/259 (13%), Positives = 66/259 (25%), Gaps = 23/259 (8%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V  WN +  RA    +   +     DI+ + E          E  +     I+  G  
Sbjct: 1   MKVVAWNAD--RAFRKKIDKIL-PLKADILIISEC---------EKPEKWGQVIDEKGIV 48

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            +             I            A      + +  +       ++         +
Sbjct: 49  EFLWEGDNPNKGIGIITFDEKYQIETHPAYDKSFRYIVPYKVSVGKLEFILFAVWSQKGE 108

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
                   + +L        L++P I  GD+N             +     F        
Sbjct: 109 KRYDSYIGQIYLALEKYASLLKKPCIIVGDWNSNKLFDHIKRVKTYSEVVEFLEGFGIKS 168

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
                       +  H      + +     +   +    ID +  S      L S  I +
Sbjct: 169 AYHH------LSKKEHGEELKATHYFRKEKARPFH----IDFLFASNLLLDQLKSFHIGS 218

Query: 244 KPRGWTKPSDHTPVIVSLD 262
           +   W + SDH P+I   +
Sbjct: 219 RE-DWIEFSDHMPIIAEFN 236


>gi|242096158|ref|XP_002438569.1| hypothetical protein SORBIDRAFT_10g022040 [Sorghum bicolor]
 gi|241916792|gb|EER89936.1| hypothetical protein SORBIDRAFT_10g022040 [Sorghum bicolor]
          Length = 1088

 Score = 52.5 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 30/267 (11%), Positives = 70/267 (26%), Gaps = 38/267 (14%)

Query: 4   VTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQET---KTEDKNFPFETLQSLNY 55
           +++ +WN   +       ++ +LA  I   N  +I L ET   K    +   +      Y
Sbjct: 1   MSLLSWNCQGVGGSLDSPKMRHLARLINSTNAQVIFLSETRNTKITKNDLINKFNLENAY 60

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
            I   G      +    + +   I +           + +   F +      +     PH
Sbjct: 61  TISAEGLSGGLWLLSRDQVEVSVIESCNFYFLAICYHKHVRKKFGL------VCVYGDPH 114

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
                      +   +           ++   +         P                 
Sbjct: 115 RRRTAWIWRQIRHFVMSNQDLPVICMGDMNNIMNVTEKLGPRP----------------- 157

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
               ++       +               Y++ +    S+   +  R+D    + E  + 
Sbjct: 158 --ANQRLISNFCCLVKDCGFFDLGYHGPAYTWSNKRFSSFPTYE--RLDRFFGNAEWCAN 213

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLD 262
             +  +   P      SDH P++  L+
Sbjct: 214 FPNTSVFHLPM---LYSDHAPILAVLN 237


>gi|147800373|emb|CAN70928.1| hypothetical protein VITISV_016057 [Vitis vinifera]
          Length = 2064

 Score = 52.5 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 8/38 (21%), Positives = 20/38 (52%), Gaps = 2/38 (5%)

Query: 4    VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETK 39
            + + +WN   + +R     +  +++    D++ +QETK
Sbjct: 1212 IKIISWNTRGLGSRKKRRVVKDFLRSEKXDVVMIQETK 1249


>gi|47220750|emb|CAG11819.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 451

 Score = 52.5 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 46/290 (15%), Positives = 75/290 (25%), Gaps = 47/290 (16%)

Query: 4   VTVATWNVNSIRARIHNLA-------AWIKENNPDIICLQETKTE-DKNFPFETLQSLNY 55
           V V + N   IR    ++          + +   DI+ LQE  +E D  F  + L S + 
Sbjct: 4   VRVFSLNCWGIRYLSKHVRQRYAMIGDMLSKEKHDIVLLQEVWSEKDYLFLKQKLSSCHP 63

Query: 56  HIETC-------------GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN 102
           H                   +  +             + H                    
Sbjct: 64  HSHYFKSGVIGSGLALFSKHRIQDAFLYRYSLNGYPYMAHHGDWFGGKAVGLAVLNIGSL 123

Query: 103 TQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD 162
           T  + + +L+  +           ++       +F        + +I  GD N+ PQ   
Sbjct: 124 TANVYVTHLHAEYCRDRD-PYLPHRVVQAWELQQFVRHTSAGADVVILGGDLNMHPQDLG 182

Query: 163 CYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR 222
           C             LE  +       +          +                 +KGIR
Sbjct: 183 CRLLRTSTGLRDSYLETSKFDGCENGVTLIPENPFICEKELG-----------PFDKGIR 231

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKP---------SDHTPVIVSLDI 263
           ID+IM           A I       TK          SDH  V   L +
Sbjct: 232 IDYIMFKGS-----SKASICCDFMCTTKGSVSNQPFPYSDHEAVTAHLRL 276


>gi|329767831|ref|ZP_08259347.1| hypothetical protein HMPREF0428_01044 [Gemella haemolysans M341]
 gi|328838932|gb|EGF88526.1| hypothetical protein HMPREF0428_01044 [Gemella haemolysans M341]
          Length = 748

 Score = 52.5 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 33/85 (38%), Gaps = 10/85 (11%)

Query: 199 HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT---KPSDHT 255
           H+    YS++ Y   + S      +D+I++S      +  + +           + SDH 
Sbjct: 575 HEQGDRYSYF-YRGSNQS------LDNILISKNIKDKVVFSPVHINASFMEEHGRASDHD 627

Query: 256 PVIVSLDIPEPRKKQQDSTSQNMKP 280
           PV+V +D  +        TS    P
Sbjct: 628 PVVVQIDFSKKEVSTTPETSPASTP 652


>gi|189466215|ref|ZP_03015000.1| hypothetical protein BACINT_02585 [Bacteroides intestinalis DSM
           17393]
 gi|189434479|gb|EDV03464.1| hypothetical protein BACINT_02585 [Bacteroides intestinalis DSM
           17393]
          Length = 370

 Score = 52.5 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 41/268 (15%), Positives = 95/268 (35%), Gaps = 18/268 (6%)

Query: 4   VTVATWNVNSIRARI-----HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           + VAT+NV +    I       +A ++K+   D++C QE   ++++FP ++++++  H  
Sbjct: 111 LKVATYNVGNFGTEITGYSCKEIARYMKQQEVDVLCFQEF-GDNQHFPMDSIRNVFSHWR 169

Query: 59  T---CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
                 + S +GV  ++ +    ++              ++    +   T+R+ N +L  
Sbjct: 170 YALIPTEDSISGVLPIAIFSRYPLINPRFISYPQSANCSMQCDIILGRDTVRLLNNHLQT 229

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
            +   + +  ++        R   + ++     +         Q        +    + +
Sbjct: 230 TSVNQNRRKWERGLNNTNDTRREVEVVQGAINTLHDNFVKRAEQTDSIRQLAL---ASPY 286

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
           ++ V   F  L +      +          S   Y        + +RID+I  SP     
Sbjct: 287 SVVVCGDFNSLPSSYTYAELSDILKDGFRTSGRGYMYTFRYFKRLLRIDYIFHSPAIQ-- 344

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                           SDH PV++ + I
Sbjct: 345 ----GYRYYSPDLDLCSDHNPVLMEMKI 368


>gi|148927868|ref|ZP_01811284.1| Endonuclease/exonuclease/phosphatase [candidate division TM7
           genomosp. GTL1]
 gi|147886783|gb|EDK72337.1| Endonuclease/exonuclease/phosphatase [candidate division TM7
           genomosp. GTL1]
          Length = 248

 Score = 52.5 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 30/263 (11%), Positives = 60/263 (22%), Gaps = 24/263 (9%)

Query: 4   VTVATWNV--NSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           + +   NV  N    R+   +   I +  PDI+CLQE        P        +     
Sbjct: 1   MKLLQLNVWQN----RLHKQVLDLIAKEQPDILCLQEI-CSSNYVPPLFPGFAGFEAIQA 55

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
               Y          P+       G                +T+ + I   Y        
Sbjct: 56  ALPDYESHFAPCFSSPL------FGSTCSFGNAIFSRFPLADTEIIFINGQYQEGVELFD 109

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL--E 178
               + +            +   +     +  +     +  +          +       
Sbjct: 110 RNTTNIRNLQRTAVKTPEGEFCLINHHAFWVPNEMGSQESVEKMQRTADVIKSSPRPLVF 169

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
                   ++           D    Y+     +  + K   +  DHI +S         
Sbjct: 170 SGDLNVVSKSPAMKSIHALLRDLTEEYNIPTTLSG-FGKVPNVPCDHICVSEGI------ 222

Query: 239 ARIDTKPRGWTKPSDHTPVIVSL 261
            +I          SDH  + +  
Sbjct: 223 -QIQKFGAKQDIVSDHLALTLEF 244


>gi|147770044|emb|CAN74335.1| hypothetical protein VITISV_010831 [Vitis vinifera]
          Length = 644

 Score = 52.5 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 25/247 (10%), Positives = 68/247 (27%), Gaps = 30/247 (12%)

Query: 15  RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKY 74
           R++   + + I+    D+ C+QETK +      E ++SL                     
Sbjct: 143 RSKRKVIKSVIRNQKVDLFCIQETKMQV--MSEEVVRSLG----------LGRFLDWRVL 190

Query: 75  QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRF 134
             +     +           +            I   +   G+            + +  
Sbjct: 191 NAMGTAGGVLIYWDKRLLEILGVEEG----QFSISCRFRNVGDEGIWVFMGVYGPFSREE 246

Query: 135 LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDA 194
                     E      G +         ++ I+++++      +  + ++   +     
Sbjct: 247 RECL-----WEVFGAIRGLWEEPWCLGGDFHTILYQSERSRNGRITSAMRRFAQIIDDLR 301

Query: 195 IRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP-SD 253
           +         +++    +   +     ++D  + +P               R   +P SD
Sbjct: 302 LVDFPLQGGSFTW----SGGLNNQSRTKLDRFLATPNWLDQYSRVY----QRRLFRPTSD 353

Query: 254 HTPVIVS 260
           H PV++ 
Sbjct: 354 HFPVLLE 360


>gi|329964595|ref|ZP_08301649.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           fluxus YIT 12057]
 gi|328524995|gb|EGF52047.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           fluxus YIT 12057]
          Length = 286

 Score = 52.5 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 37/272 (13%), Positives = 78/272 (28%), Gaps = 32/272 (11%)

Query: 6   VATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56
           V T+N+         N+ + R  N    I    PD++ +QE    ++    +  Q L  +
Sbjct: 32  VMTFNIRLDAPSDSANNWKYRKDNACKMIAYYQPDLLGMQEV-CHNQM--EDLKQGLPQY 88

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ-----TLRIGNL 111
                 +     A        +       +  +        T  I         +    +
Sbjct: 89  TALGVGRDDGKEAGEYCPVFFKTDRFTLVEYGNFSLSEHPDTIGIKGWDASYNRVTTWAV 148

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
                N      ++  +    +  R    +L L +                   P I   
Sbjct: 149 LQEKSNGKKFVYFNTHLDNDGKIARKEGVQLILNKIK-----------EIAPDVPAIITG 197

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
           D     +        +      +  A       +SF D        ++ + ID++ ++  
Sbjct: 198 DFNCEPDEEPLQILEKGGMQNTSETAGITYGPSWSFHD--FGRIPLDERVLIDYVFVTDG 255

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             + ++  R+          SDH PV+V+L +
Sbjct: 256 --AKVNRYRVIQDAPENGFLSDHCPVLVNLTL 285


>gi|293602541|ref|ZP_06684987.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
           43553]
 gi|292819303|gb|EFF78338.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
           43553]
          Length = 288

 Score = 52.5 bits (124), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 38/306 (12%), Positives = 91/306 (29%), Gaps = 60/306 (19%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENN-------PDIICLQETK----------TEDK 43
           MS++ V ++N++  R+ +      + E         PD++ LQE +           + +
Sbjct: 1   MSLIRVVSYNIHKGRSALGR-RDSLNELRLGLYGLRPDLVFLQEVQGRNEQKSLLDAQHE 59

Query: 44  NFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
           +        + Y        + +G A+LS++  ++       D    Q   + A   ++ 
Sbjct: 60  SLAAALRLDVAYGRNAIRHATDHGNALLSRFPILDHENVDISDHRLEQRGLLHARIEVDE 119

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
           + +    ++L       + +       I+  +      L   +   +      +      
Sbjct: 120 RPVHCFVVHLGLFAGSRTRQVLALTERIRCMVPDGEPILIAGDFNDWNDRLAPLFVQQLG 179

Query: 164 YNPIIWENDACFTLEVRQS-------------------------FQKLQNMGFTDAIRAT 198
              +          E+ +                           Q              
Sbjct: 180 LYEVFSHAPRSHGGELPRLRDSVKRLSNALRGLPNGGLSVLERTNQLGMEGSAGLLQPPP 239

Query: 199 HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVI 258
                ++ ++             R+D I         + SAR+    R W + SDH+P++
Sbjct: 240 RTFPAVFPWF-------------RLDRIY-QRGFA--VRSARVLRG-REWARLSDHSPLL 282

Query: 259 VSLDIP 264
             L++P
Sbjct: 283 AELELP 288


>gi|121608305|ref|YP_996112.1| endonuclease/exonuclease/phosphatase [Verminephrobacter eiseniae
           EF01-2]
 gi|121552945|gb|ABM57094.1| Endonuclease/exonuclease/phosphatase [Verminephrobacter eiseniae
           EF01-2]
          Length = 245

 Score = 52.1 bits (123), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 31/269 (11%), Positives = 71/269 (26%), Gaps = 41/269 (15%)

Query: 3   VVTVATWNVN--------SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           ++ VA++N++          R  IHNL   I++ + DI+CLQE +               
Sbjct: 6   ILRVASYNIHKGVQGIGPGRRLEIHNLGLAIEQLDADIVCLQEVR----KLHRRE----- 56

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
                           L+      +               + + + +             
Sbjct: 57  -QAYFQRWPELPQAQFLAPEGYEAVYRTNAVTRHGEHGNALLSRWPVIGH---------- 105

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
               ++  +++ +     +          +   L       +                A 
Sbjct: 106 QHQDLSDHRFEQRGLLHVQLDVHGRPLHVIVVHLGLIAGSRMRQIERLQGFIEREVPSAA 165

Query: 175 FTLEVRQSFQKLQNMGFTDAIRA--THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
             +           +    A  A    D    +++        ++   +++DH+      
Sbjct: 166 PLVVAGDFNDWGVQVKRMLAGFALLEFDAPRAFTYP-------ARLPLVQLDHVYA-RGL 217

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
             L        + R W + SDH P+I   
Sbjct: 218 APLSLHV---PRGRIWWRMSDHLPLIAEF 243


>gi|291515600|emb|CBK64810.1| Endonuclease/Exonuclease/phosphatase family [Alistipes shahii WAL
           8301]
          Length = 816

 Score = 52.1 bits (123), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 37/304 (12%), Positives = 77/304 (25%), Gaps = 55/304 (18%)

Query: 4   VTVATWNV-NSIRA----RIHNLAAWIKENNPDIICLQETKTEDK----------NFPFE 48
           + V  WN+ N + +      +N  AW+K+ +PDI C      E                 
Sbjct: 522 LRVLYWNIQNGMWSDQANNYNNFVAWVKKYDPDI-C---VWCESATIYKDNTNSAQASSA 577

Query: 49  TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT--------------HLPGDDLDVQARF 94
                 +                 +    + +T                 G  +   A  
Sbjct: 578 RFLPDGWAALAARYGHAYTAVGGWRDNYPQTITSKYPIETLLKITDSDQAGKPVSHGAAI 637

Query: 95  IEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDY 154
              T    T  +   + +         +      +  K   ++    ++           
Sbjct: 638 QRVTVKGRTINIVTLHTWPQAYGFGVGSADQAASAANKEGDKYREFEIKYICAQTVNNPA 697

Query: 155 NIIPQPHDCYNPIIWENDACFT----LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWD- 209
               Q           + A        E         ++     ++      +  SF   
Sbjct: 698 YASCQDWLMMGDFNSRSRADNWYYGYPENDTRLLVHNHILDHTNLKDIIAERYPGSFISS 757

Query: 210 YYADSWSKNKGIRIDHIMLSPEATSLLHSA--RIDTKPRGWTKP--------SDHTPVIV 259
            Y ++       RID++  SP   + + +A   +D        P        SDH P++ 
Sbjct: 758 TYGNA-------RIDYMYASPSMYARIVNALTVMDKWTTATQSPYVSNFYDPSDHRPILA 810

Query: 260 SLDI 263
             ++
Sbjct: 811 DFEL 814


>gi|114605929|ref|XP_518271.2| PREDICTED: TRAF and TNF receptor-associated protein [Pan
           troglodytes]
          Length = 384

 Score = 52.1 bits (123), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 36/240 (15%), Positives = 68/240 (28%), Gaps = 46/240 (19%)

Query: 2   SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           S+ ++ TWN++ +       RAR   + +++   +PD+I LQE        P        
Sbjct: 142 SMFSLITWNIDGLDLNNLSERAR--GVCSYLALYSPDVIFLQEV------IPP------- 186

Query: 55  YHIETCGQKSYNGVAI-LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
           Y+     + S   +     +     I+       L  Q      +  +    L +     
Sbjct: 187 YYSYLKKRSSNYEIITGHEEGYFTAIMLKKSRVKLKSQEIIPFPSTKMMRNLLCVHVNVS 246

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
            +   + ++  +         +      L+               Q       +I+  D 
Sbjct: 247 GNELCLMTSHLESTRGHAVERMNQLKMVLK-------------KMQEAPESATVIFAGDT 293

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG------IRIDHIM 227
                       L N             H  Y+ WD   +S   N G      +R D I 
Sbjct: 294 NLRDREVTRCGGLPNNIVDVWEFLGKPKHCQYT-WDTQMNS---NLGITAACKLRFDRIF 349


>gi|171321352|ref|ZP_02910309.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria MEX-5]
 gi|171093370|gb|EDT38560.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria MEX-5]
          Length = 286

 Score = 52.1 bits (123), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 18/41 (43%), Gaps = 4/41 (9%)

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
           D + ++      +    ID   R     SDH PV++ L++ 
Sbjct: 250 DFVFVTATLLPRVTRCEIDGDVR----ASDHQPVVLELEVD 286


>gi|228995734|ref|ZP_04155396.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock3-17]
 gi|228764016|gb|EEM12901.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock3-17]
          Length = 263

 Score = 52.1 bits (123), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 43/286 (15%), Positives = 81/286 (28%), Gaps = 49/286 (17%)

Query: 4   VTVATWNVNS---------IRARIHNLAAWIKENNPDIICLQET----KTED-------K 43
           + + T N +S         IR    +LA  I+E   D+I LQE     K ++        
Sbjct: 1   MKLLTLNCHSWQEENQIEKIR----HLAKTIQEEGYDVIALQEVSQSIKAQNVCGNKKKD 56

Query: 44  NF------PFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA 97
           NF        E L S NY+I          +         +            +++    
Sbjct: 57  NFGLVLLAELEKLGSGNYNIVWDYSHIGYDIYEEGSAIITKHPIVKQDSFFVSESK---- 112

Query: 98  TFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII 157
               +T   +   +     +                     + + +++       +  + 
Sbjct: 113 ----DTSYWKARKIVSATVSYKGKNMTFYSCHLGWWNDEEETFQGQVDCLTQHVNEKELS 168

Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK 217
               D  N    + +    L  +  +   +     D              WD        
Sbjct: 169 ILMGDFNNNARLQGEGYDYLMQKGLYDTYELAFKKDEGTTVQGKIAG---WD------EN 219

Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            + +RID I+ +      + S+++          SDH  V V LDI
Sbjct: 220 KQNLRIDLILSNKP--KTVISSKVIFNGINRNIISDHFGVEVQLDI 263


>gi|147854851|emb|CAN78599.1| hypothetical protein VITISV_001333 [Vitis vinifera]
          Length = 751

 Score = 52.1 bits (123), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 29/260 (11%), Positives = 71/260 (27%), Gaps = 49/260 (18%)

Query: 4   VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + +WNV      ++   + A+I++   D++C+QETK               +     G
Sbjct: 17  LKLLSWNVRGANGSSKRKIIKAFIRKQKVDLLCIQETK---------------FQSMIEG 61

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
                G      ++ ++      G  +    RF                ++     PIT 
Sbjct: 62  VVRSLGTGRFLDWRALDASGSTGGILICWDKRFRNVENG-------FVWVFTGVYGPITK 114

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            + +     +        +   L              +       +         L +  
Sbjct: 115 EERECLWEELGAIRGIWEEPWCLGGXFNIIXFQREXSRQGRLTTTMRRFXQIIDELGLVD 174

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSAR 240
              +                  L+++          N+   R+D  +++P     +  + 
Sbjct: 175 LPLQR----------------GLFTW-----SGGQNNQSWARLDKFLVTPSWL--VQFSG 211

Query: 241 IDTKPRGWTKPSDHTPVIVS 260
           +           DH P+++ 
Sbjct: 212 VLQSRLPRPIF-DHFPILLE 230


>gi|332142708|ref|YP_004428446.1| Endonuclease/exonuclease/phosphatase [Alteromonas macleodii str.
           'Deep ecotype']
 gi|327552730|gb|AEA99448.1| Endonuclease/exonuclease/phosphatase [Alteromonas macleodii str.
           'Deep ecotype']
          Length = 237

 Score = 52.1 bits (123), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 37/278 (13%), Positives = 85/278 (30%), Gaps = 57/278 (20%)

Query: 5   TVATWNVN-SI----RARIHNLAAWIKENNPDIICLQE--TK------TED-KNFPFETL 50
            + T+N++  I    +     +  ++  +  D++ LQE  T+       +D ++   E  
Sbjct: 3   RIVTYNIHSGIGRDKKQDYKRIGQFLASSGADVVLLQEMDTRPPERDTAQDVRDICAENT 62

Query: 51  QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
             L           + G AIL++Y  +   T                        L + N
Sbjct: 63  FKLIPSPAIREADGWYGNAILTRYDVLSNDTVDVSQSGRQPRNVQIVELKTEKTPLTVVN 122

Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170
            +         +++      + + L+     L                            
Sbjct: 123 THKGLKKLERRSQFSLLHEHLSQRLKEKQTPLV-------------------------LA 157

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230
            D        ++F+ L ++ F   + AT       S +  ++          +D + ++ 
Sbjct: 158 GDFNEWQFFSKAFKGLNSLLFQQKVGATFP-----SHFPVFS----------LDRVWVTD 202

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268
           +    + + R           SDH PV++ +++PE   
Sbjct: 203 DI--KVKACRKLKNA-KTRVYSDHLPVLIDIELPESPD 237


>gi|147836454|emb|CAN59718.1| hypothetical protein VITISV_032347 [Vitis vinifera]
          Length = 1198

 Score = 52.1 bits (123), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 36/261 (13%), Positives = 81/261 (31%), Gaps = 35/261 (13%)

Query: 4   VTVATWNVNSIRARIHNLAA--WIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + +WN   + +R        ++   NPD++ LQETK           +  +    +  
Sbjct: 637 MKILSWNTRGLGSRKKRRTXRRFLSTQNPDVVMLQETK----------REIWDRRSVSSV 686

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
            K  +   +                 L    +F  +   + + ++ +       G    +
Sbjct: 687 WKGKSLDWVALPACGAS----GGIVILWDSXKFXCSXKVLGSFSVTVKLNSDEEGFFWLT 742

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFA--GDYNIIPQPHDCYNPIIWENDACFTLEV 179
           + Y    +  ++      Q L       +   GD+N+I +  +         +     E 
Sbjct: 743 SVYGPNKAVWRKDFWMELQDLHGLTFPRWCVGGDFNVIRRISEKMGDSRLTVNMRCFDEF 802

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
                          +      +  +++ +   D   K    R+D  + S E  S    +
Sbjct: 803 I----------RESGLLDPPLRNAAFTWSNMQVDPICK----RLDRFLFSSEWDSFFSQS 848

Query: 240 RIDTKPRGWTKPSDHTPVIVS 260
             +  PR     SDH+P+ + 
Sbjct: 849 IQEALPRXT---SDHSPICLE 866


>gi|123473915|ref|XP_001320143.1| Endonuclease/Exonuclease/phosphatase family protein [Trichomonas
           vaginalis G3]
 gi|121902942|gb|EAY07920.1| Endonuclease/Exonuclease/phosphatase family protein [Trichomonas
           vaginalis G3]
          Length = 407

 Score = 52.1 bits (123), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 34/287 (11%), Positives = 83/287 (28%), Gaps = 36/287 (12%)

Query: 6   VATWNV-NSIRARIHNL------------------AAWIKENNPDIICLQETKTEDKNFP 46
           + +WN+  S +    +                   A  + E +PDII LQE +    +  
Sbjct: 128 ILSWNILAS-KVARRDFYPLSTEKCMATYYRDTLTAQIVDEIHPDIIALQEFEARQASDW 186

Query: 47  FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
            +      Y +    +  Y       +       T +            +  +  +++ +
Sbjct: 187 SKPFIENGYWVTVAPKGRYYTKKPADQLFVHGQATFVNLHRF--DVLISQLFYPRDSKLV 244

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
              +  +   + +         S   +     +  ++  +  +      II +    +  
Sbjct: 245 SADDTDIKGCDDVVLITAVRTHSKPSKNYIILNVHMKFNDAEVRKRLAEIIMKETLNFAH 304

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226
             ++      +           +      + ++     +S        + K+   RIDHI
Sbjct: 305 QQFKVFGIIVVGDFNDKTNSPTLQRFYDFKLSNIYDAFHS--TVNTAIFQKDDAARIDHI 362

Query: 227 MLSPEATSLLHS----------ARIDTKPRGWTKPSDHTPVIVSLDI 263
           ++S      + S          A        +  PSDH P+   ++I
Sbjct: 363 LISKNI--KVKSILSQDTYGQLAEAHPFIPCYGFPSDHLPIGAVIEI 407


>gi|121603898|ref|YP_981227.1| endonuclease/exonuclease/phosphatase [Polaromonas naphthalenivorans
           CJ2]
 gi|120592867|gb|ABM36306.1| Endonuclease/exonuclease/phosphatase [Polaromonas naphthalenivorans
           CJ2]
          Length = 375

 Score = 52.1 bits (123), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 22/57 (38%), Gaps = 17/57 (29%)

Query: 224 DHIMLSPEATSLLHSARIDTK-----------------PRGWTKPSDHTPVIVSLDI 263
           D+I+LSP     + +A ++ +                  R     SDH  V V LDI
Sbjct: 319 DYILLSPGLFDKVKAAGVERRGMWGGTNGTLWPHFKEVTRAEEAASDHAAVWVELDI 375


>gi|289663955|ref|ZP_06485536.1| endonuclease/exonuclease/phosphatase family protein [Xanthomonas
           campestris pv. vasculorum NCPPB702]
 gi|289667545|ref|ZP_06488620.1| endonuclease/exonuclease/phosphatase family protein [Xanthomonas
           campestris pv. musacearum NCPPB4381]
          Length = 288

 Score = 52.1 bits (123), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 34/276 (12%), Positives = 65/276 (23%), Gaps = 32/276 (11%)

Query: 2   SVVTVATWNVNSIRA------------RIHNLAAWIKENNPDIICLQETKTEDKNFPFET 49
           S + V ++NV   R             R  ++ A IK+ +PD+   QE   E   +    
Sbjct: 33  SPLRVMSFNV---RVPVDRDGDKRWAVRRTSMVALIKQTHPDVFGTQELVQEQAQYLASH 89

Query: 50  LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
           L +  +  +            +        V       L        ++         + 
Sbjct: 90  LPAYRWFGKGRRADGSEEHMGVFYDSNALSVIESGDFWLSETPEVPGSSSWNTDLPRMVT 149

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
                  +                  R   +    +   +       +P          +
Sbjct: 150 WALFERRSDKRRFYL----LNTHLPHRDQDEAAREQGARVILSRIATLPADIPVVVTGDF 205

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
            +D         +             +    T   ++               RID I+  
Sbjct: 206 NSDPDQGTYRTLTAVLGDARAHVAKPQGPEKTFQDFTTQPTR----------RIDWILF- 254

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
              T             G   PSDH PV+   + P+
Sbjct: 255 RGLTP--TRFSTLDMRPGGILPSDHYPVLAEFEWPQ 288


>gi|253571354|ref|ZP_04848761.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|251839307|gb|EES67391.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
          Length = 315

 Score = 52.1 bits (123), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 42/292 (14%), Positives = 78/292 (26%), Gaps = 45/292 (15%)

Query: 4   VTVATWNV-----------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52
           +TVA++N+           +    R   +A  ++ ++ DI   QE          E L  
Sbjct: 27  LTVASYNLRNANGSDSARGDGWGQRYPVIAQIVQYHDFDIFGTQECFLHQLKDMKEALPG 86

Query: 53  LNY-HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
            +Y  +     K     + +        +       L          +      +     
Sbjct: 87  YDYIGVGRDDGKDKGEHSAIFYRTDKFDIVEKGDFWLSETPDVPSKGWDAVLPRICSWGH 146

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
           +           ++  +  I +  R  S  L  E+        N+              N
Sbjct: 147 FKCKDTSFEFLFFNLHMDHIGKKARVESAFLVQEKMKELGRGKNLP------AILTGDFN 200

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
                        K       +     +  +  ++ +D   +S+++    RIDHI +SP 
Sbjct: 201 VDQTHQSYDAFVSKGVLCDSYEKCDYRYALNGTFNNFD--PNSFTE---SRIDHIFVSPS 255

Query: 232 A--------------------TSLLHSA--RIDTKPRGWTKPSDHTPVIVSL 261
                                   +      I  K      PSDH PV V L
Sbjct: 256 FHVKRYGVLTDTYRSVRENSKKEEVRDCPEEITIKAYEARTPSDHFPVKVEL 307


>gi|327270084|ref|XP_003219821.1| PREDICTED: tyrosyl-DNA phosphodiesterase 2-like [Anolis
           carolinensis]
          Length = 366

 Score = 52.1 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 39/280 (13%), Positives = 79/280 (28%), Gaps = 49/280 (17%)

Query: 2   SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           S +++ TWN++ +       RAR   + ++I   +PD++ LQE        P      L 
Sbjct: 116 STLSLITWNIDGLDLKNLPERAR--GVCSYIALYSPDVVFLQEV------IPP-LFDYLQ 166

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
               +      N  A  +      I+       +         T ++    L +      
Sbjct: 167 KRAVSYTIIPGNTDAYFTA-----IMLKKSRVKIIKHEIIRFPTTSMMRNLLAVHATVFG 221

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
           +     ++  +      +  L      L                +       +I+  D  
Sbjct: 222 NELCFMTSHLESTKDHGEERLNQLKMVL-------------AKMKEVPESTTVIFGGDTN 268

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF-WDYYADSWSK-NKGIRIDHIMLSPEA 232
              +       L N             H  Y++      +  ++ N  +R D +      
Sbjct: 269 LRDKEVAKIGGLPNNILDIWEFLGKPEHCKYTWDTSQNTNLEARYNCKMRFDRLF----L 324

Query: 233 TSLLHSARIDT---KPRGWTK------PSDHTPVIVSLDI 263
            +     +I        G  K      PSDH  +  + D+
Sbjct: 325 RAASAGGQIIPQSLDLIGLEKLDCGRFPSDHWGLFCNFDV 364


>gi|220921344|ref|YP_002496645.1| endonuclease/exonuclease/phosphatase [Methylobacterium nodulans ORS
           2060]
 gi|219945950|gb|ACL56342.1| Endonuclease/exonuclease/phosphatase [Methylobacterium nodulans ORS
           2060]
          Length = 279

 Score = 52.1 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 39/281 (13%), Positives = 74/281 (26%), Gaps = 47/281 (16%)

Query: 2   SVVTVATWNVN---SIRARIH--NLAAWIKENNPDIICLQETKT---------EDKNFPF 47
            V+ + T+NV     I  R+    +A  +    PD++ LQE            +      
Sbjct: 19  RVLRLITYNVRRCLGIDGRLSPVRIAEVLASCRPDVVALQELDVGRMRSGMVDQAHAIAQ 78

Query: 48  ETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107
                 ++H      +   G AIL+      +               +E    +      
Sbjct: 79  HLGMRAHFHAALRVMEEEYGNAILTALPSRLV--RAEALPGLPDRPHLEPRGALWAAITA 136

Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167
                      +   + +                     P++  GD N +P         
Sbjct: 137 HDTEIQVIATHLGLRRRERARQAEALLGSRFLSDPACRPPVVLVGDLNAVPHSFAYRRLA 196

Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227
              +DA     + +  +   +                                +R+DH+ 
Sbjct: 197 GRLSDAQRAPGMPRRQRTYPSACPL----------------------------LRLDHVF 228

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268
           +S   T            R     SDH P++V L++  PR 
Sbjct: 229 VSEGVTVRRVEVVRGPLAR---IASDHLPLLVDLEVAGPRP 266


>gi|320160210|ref|YP_004173434.1| hypothetical protein ANT_08000 [Anaerolinea thermophila UNI-1]
 gi|319994063|dbj|BAJ62834.1| hypothetical protein ANT_08000 [Anaerolinea thermophila UNI-1]
          Length = 242

 Score = 52.1 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 30/258 (11%), Positives = 65/258 (25%), Gaps = 25/258 (9%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + TWN              +    PD+  +QE     ++    + +  N    T    
Sbjct: 1   MKLVTWNCQG---AFRRKYPALAALQPDLAVVQEC----ESLERISWKQGNAPTHTFWYG 53

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
                 +              G D  +               +            +  + 
Sbjct: 54  EKPTRGVGIFSWTQTSFRVKEGFDTSIHYAIPVEVEAPIPFHVIAVWTMKHADWRLAYSG 113

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
              +   + R    ++  + L     F  +    P+                      + 
Sbjct: 114 QAYRALGVYREFILSADTVILG---DFNSNQRTAPR-------------GRVGSHAVLAA 157

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
                   +    AT +     +   ++    ++  G  ID++ +       L S ++  
Sbjct: 158 NLHTLGLISAYHFATGEKSGNETHPTFFHGRKTEQAG-HIDYVFIPSRWIRRLKSVQV-G 215

Query: 244 KPRGWTKPSDHTPVIVSL 261
            P  W   SDH PV+V  
Sbjct: 216 NPGEWLAYSDHCPVMVEF 233


>gi|302879657|ref|YP_003848221.1| Endonuclease/exonuclease/phosphatase [Gallionella capsiferriformans
           ES-2]
 gi|302582446|gb|ADL56457.1| Endonuclease/exonuclease/phosphatase [Gallionella capsiferriformans
           ES-2]
          Length = 249

 Score = 52.1 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 40/269 (14%), Positives = 72/269 (26%), Gaps = 32/269 (11%)

Query: 1   MSVVTVATWNV-------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           M  +TVAT+N+       N  R  +H L   + E N DI+ LQE          E     
Sbjct: 1   MQTLTVATYNIHKGFSHFNG-RVVMHELRERLHELNADIVFLQEV-------QGEHTGHA 52

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
                     +++      ++       +   +        +     + T    I     
Sbjct: 53  G-RFANYPDGAHHEFIADRRWPHSAYGKNCVYEAGHHGNAILSRYPIVQTLNTDISAHRF 111

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
                +                             +FA       +    Y       D 
Sbjct: 112 ESRGLL---------HCEIALPDGQRLHSLCAHFGLFARGRRAQTRALIEYVQHEIPPDV 162

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI-RIDHIMLSPEA 232
              +    +  + Q      +    HD   L+      A S+     + R+D I +    
Sbjct: 163 QVIIAGDFNDWRNQMGAVIASELGMHDVFQLHG--GRVARSFPARLPLFRLDRIYM-RGF 219

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           T  +  A +      W + SDH  +  +L
Sbjct: 220 T--VAQAEVHAGG-AWQRLSDHAAISATL 245


>gi|164657067|ref|XP_001729660.1| hypothetical protein MGL_3204 [Malassezia globosa CBS 7966]
 gi|159103553|gb|EDP42446.1| hypothetical protein MGL_3204 [Malassezia globosa CBS 7966]
          Length = 63

 Score = 52.1 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 10/63 (15%)

Query: 4  VTVATWNVNSIRARIH------NLAAW---IKENNPDIICLQETKTEDKNFPFETLQSLN 54
          + +  WNVN +R  +        L +W   +KE + DI C QE K   K   +      +
Sbjct: 1  MRIVCWNVNGLRT-LKSYAPWYGLPSWEACLKELHADIACFQEVKMTRKQLTYAMCVMDD 59

Query: 55 YHI 57
          Y  
Sbjct: 60 YEA 62


>gi|154491892|ref|ZP_02031518.1| hypothetical protein PARMER_01519 [Parabacteroides merdae ATCC
           43184]
 gi|154088133|gb|EDN87178.1| hypothetical protein PARMER_01519 [Parabacteroides merdae ATCC
           43184]
          Length = 373

 Score = 52.1 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 42/289 (14%), Positives = 73/289 (25%), Gaps = 47/289 (16%)

Query: 2   SVVTVATWNVNSIRARIHN--------LAAWIKENNPDIICLQETKT-EDKNFP-----F 47
           +V+ V T+NV                 +  +I  +  DI+CLQE      KNF       
Sbjct: 105 NVLKVLTYNVMGFG--YKGHTEDAPNPIIRYIANSGADIVCLQEYAVGTSKNFLTNQKIA 162

Query: 48  ETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107
             L+   Y        S      ++ +    I                     I  + L 
Sbjct: 163 NALKMYRYRSIIPIGTSGTLKFNIAVFSKYPISKSRKIKYDSSFNGSSIHELDIRGKKLT 222

Query: 108 IGNLYLPHGNPITSTKYDDKISWIK-----------RFLRFASQRLELEEPLIFAGDYNI 156
           + N +L         +                       +       +      A    I
Sbjct: 223 LINNHLESFKLTMEDRSHYSAFIKNLNSETLDGLRSSIEQKLGPAFRIRARQARAVAEEI 282

Query: 157 IPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS 216
                D        ND   +   R     L++             +  + ++        
Sbjct: 283 KKIDTDYVLVCGDFNDTPISYAHRTIQGPLKDAYAASGRGVGVTYNENFFWF-------- 334

Query: 217 KNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
                RID+I+ S        +  +D       + SDH P+   L + E
Sbjct: 335 -----RIDNILHSANMKP--INCTVDK-----VRYSDHYPLWCYLQLKE 371


>gi|74007488|ref|XP_848398.1| PREDICTED: similar to LINE-1 reverse transcriptase homolog [Canis
           familiaris]
          Length = 1025

 Score = 52.1 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 41/110 (37%), Gaps = 12/110 (10%)

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
               + E R     L  M FTD  R  H     Y+F+     ++S     RIDHI+    
Sbjct: 371 KQNISKETRALNDTLDQMDFTDIYRTLHPNSTEYTFFSSAHGTFS-----RIDHILGHKS 425

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
             +     RI          SDH  + + L+    +K  + S +  ++ I
Sbjct: 426 GLNRYQKIRIVPCI-----FSDHNALKLELN--HNKKFGRTSNTWRLRTI 468


>gi|242058129|ref|XP_002458210.1| hypothetical protein SORBIDRAFT_03g029010 [Sorghum bicolor]
 gi|241930185|gb|EES03330.1| hypothetical protein SORBIDRAFT_03g029010 [Sorghum bicolor]
          Length = 1150

 Score = 52.1 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 37/271 (13%), Positives = 72/271 (26%), Gaps = 56/271 (20%)

Query: 4    VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
            ++V  WNV  +   A    +   +  + P I+CLQETK                      
Sbjct: 874  LSVLCWNVRGLNDAAHRELVRETVACSRPTIVCLQETKIS-------------------H 914

Query: 62   QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
             K+      + +           G    +   + +   +I+    R+  +      P +S
Sbjct: 915  IKTNLVTQTVGQQLNTYAELGAQGTRGGILLAWNKDMISISNPVSRVFTISATVSVPSSS 974

Query: 122  TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            T +     +           L        A      P P   +      N      +   
Sbjct: 975  TSFLLTTCYGPADDGRKEDFL--------AELLECNPGPQSPWLIAGDFNLIYQADDKNN 1026

Query: 182  SFQKLQNMGFTDAIRATHD------THHLYSFWDYYADSWSKNKGIRIDHIMLS------ 229
                 + MG         +       +  Y++    ++  S    +R+D +  +      
Sbjct: 1027 LNLNRRMMGKFRRALDDCELFELTLQNRRYTW----SNERSNPTLVRLDRVFCNAEWEVS 1082

Query: 230  -PEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
             P       S             SDH P+ +
Sbjct: 1083 FPNFALSALSTG----------ASDHCPLFL 1103


>gi|147865117|emb|CAN84100.1| hypothetical protein VITISV_012063 [Vitis vinifera]
          Length = 1282

 Score = 52.1 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 34/251 (13%), Positives = 72/251 (28%), Gaps = 29/251 (11%)

Query: 4   VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           V +  WNV      ++   +  +I+    D+IC+QETK +         +SL        
Sbjct: 517 VKILXWNVRGANDSSKKKVIKTFIRNQRVDLICIQETKIQ--XMSDSIARSLGSGRFLDW 574

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +      A        +  +    D  + Q         +    + +        + +  
Sbjct: 575 KAVNAEGASGGILICWDRRSLDIXDWEEGQFTLSCRFRNVENGAIWVFTGVYGPFSKVER 634

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
                       +  F + R   E+P    GD+NI   P +  +             +  
Sbjct: 635 DAL---------WEEFGAIRGLWEDPWCLGGDFNITLFPRERSSQRR----------ISS 675

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSAR 240
           + +K   +     +         +++     +    N+   R+D  ++SP          
Sbjct: 676 AMRKFAEIVDDLGLVDLPLHGGEFTW-----NGGQNNQAWARLDRFLMSPSWIDQFSGIN 730

Query: 241 IDTKPRGWTKP 251
               PR     
Sbjct: 731 QCRLPRPEXHW 741


>gi|329955242|ref|ZP_08296199.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           clarus YIT 12056]
 gi|328526241|gb|EGF53260.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           clarus YIT 12056]
          Length = 370

 Score = 52.1 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 48/270 (17%), Positives = 94/270 (34%), Gaps = 33/270 (12%)

Query: 4   VTVATWNV----NSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57
           +TVAT+NV    N I   +    +A ++++ + D++C QE    +K+F  ++L+    H 
Sbjct: 114 LTVATYNVHNFGNEITGYSC-KEIARYMRQQHVDVLCFQEF-GGNKHFTADSLRRALSHW 171

Query: 58  ETCGQKSYNGVAI---LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           +     + + +     ++ +    +               +       T T+R+ N +L 
Sbjct: 172 QYALIPADDSIRGLLPIAVFSRYPLTGGRFITYPHSSNCSMLCDIVAGTDTIRLLNNHLQ 231

Query: 115 HGNPITSTKYDD------KISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168
                 + K  +            + ++ A++ L        A   +I        +P++
Sbjct: 232 TTGVSRNRKKWERELTTDNTRREAQAVQDAAETLHENFVKRAAQTDSICHLAIAAPHPVL 291

Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
              D           +     GF +    T    ++Y+   Y          +RID+   
Sbjct: 292 VCGDFNSLPSSYTYRRLS---GFLEDGFKTGGHGYMYT---YRYGKRM----LRIDYAFH 341

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVI 258
           SPE         ID         SDH PVI
Sbjct: 342 SPELEC------IDYYSPDLDLCSDHNPVI 365


>gi|306844277|ref|ZP_07476869.1| Endonuclease/exonuclease/phosphatase family protein [Brucella sp.
           BO1]
 gi|306275349|gb|EFM57090.1| Endonuclease/exonuclease/phosphatase family protein [Brucella sp.
           BO1]
          Length = 369

 Score = 52.1 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 41/309 (13%), Positives = 77/309 (24%), Gaps = 75/309 (24%)

Query: 25  IKENNPDIICLQETKTEDKNFPFETLQ--------SLNYHIETCGQKSYNGVAILSKYQP 76
           I E   DI+CLQE    D        +           Y  +     + +    ++    
Sbjct: 65  IAETRADILCLQEV---DNLAALNAFEYGYLFKMIGYGYRHKYLIDGNDSRGIDVAVMMR 121

Query: 77  IEIVTHLPG------------------------------DDLDVQARFIEATFTINTQTL 106
                  P                                D   +   +     I  + L
Sbjct: 122 DTTRDGQPIEVDEVTSHAHLTYSDFGLYQPELAELGIEPHDRIFKRDCLNVDLRIGGEPL 181

Query: 107 RIGNLYLPHGNPI----------TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI 156
            +   +L   +               +  +  +  +            E   +  GD+N 
Sbjct: 182 SLFVAHLKSMSGARNGLDGRTSSHPVRLAEARAIRRIIEEKFGIDRVAERRWLICGDFND 241

Query: 157 IPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS 216
             +            +    +E   +   L   GF   +         ++ +        
Sbjct: 242 YRERILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDRWTLYHTRGPLER 301

Query: 217 KNKGIRIDHIMLSPEATSLLHSA-------------------RIDTKPR-GWTKP--SDH 254
                ++D+IM SP   +                         +D  PR GW +P  SDH
Sbjct: 302 --HLCQLDYIMASPAFAAKNEHVVPDIIRRGQPWRTIFPPEQNVDRYPRTGWDRPKASDH 359

Query: 255 TPVIVSLDI 263
            PV V+L++
Sbjct: 360 CPVSVTLNM 368


>gi|163938364|ref|YP_001643248.1| endonuclease/exonuclease/phosphatase [Bacillus weihenstephanensis
           KBAB4]
 gi|163860561|gb|ABY41620.1| Endonuclease/exonuclease/phosphatase [Bacillus weihenstephanensis
           KBAB4]
          Length = 263

 Score = 52.1 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 34/271 (12%), Positives = 66/271 (24%), Gaps = 19/271 (7%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET--KTEDKNFP----FETLQS 52
           + + T N +S +      +I  LA  I+E + D+I LQE     + +N       +    
Sbjct: 1   MKLLTLNCHSWQEENQIEKIKYLAKAIQEEDYDVIALQEVSQSIQAENVCGNKKKDNFGL 60

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           L              +     +   ++                +  F    +        
Sbjct: 61  LLLEELRALNVKEYNIIWDFSHIGYDVYEEGLAIITKHNIVKEDTFFVSENKDTTYWKTR 120

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                 I     +              +    ++        N         +       
Sbjct: 121 KIVSATIAYNDKNITFYSCHLGWWNDEEESFKDQVDRLMERVNSNELSFLMGDFNNNARL 180

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                E                           + WD         + +RID I+ +   
Sbjct: 181 EGEGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWD------ENKQNLRIDLILSNQS- 233

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              ++S+++          SDH  V V LDI
Sbjct: 234 -KTVNSSKVIFNGTNRNVISDHFGVEVQLDI 263


>gi|227822472|ref|YP_002826444.1| hypothetical protein NGR_c19280 [Sinorhizobium fredii NGR234]
 gi|227341473|gb|ACP25691.1| hypothetical protein NGR_c19280 [Sinorhizobium fredii NGR234]
          Length = 368

 Score = 52.1 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 41/308 (13%), Positives = 85/308 (27%), Gaps = 74/308 (24%)

Query: 25  IKENNPDIICLQETKTEDKNFPFETLQ--------SLNYHIETCGQKSYNGVAILSKYQP 76
           I + + DI+CLQE    D     +  +           Y  +   + + +    ++    
Sbjct: 66  IADCDADILCLQE---ADNMAALQAFEYGYLFRMVGNGYRQKYLIEGNDSRGIDVAVLMR 122

Query: 77  IEIVTHLPGDDL-----------------------------DVQARFIEATFTINTQTLR 107
            E       + L                               +   +E    I  + L 
Sbjct: 123 EETRDGQRIECLEVKSHATLTYEDLDLFNEELALTNRPRDRIFKRDCLEVDLRIGGRPLT 182

Query: 108 IGNLYLPHGNPITSTKYDDKISWIKR----------FLRFASQRLELEEPLIFAGDYNII 157
           +  ++     P        + +   R                +    ++     GD N  
Sbjct: 183 LYVVHFKSMGPARDGLDGRRATMALRAAEAKAVRHVIESRFGRGHTADKMFAICGDMNDY 242

Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK 217
            +            +     E   +   L + GF +   +       ++ +        +
Sbjct: 243 QEKVVILGDRRNGYEFVPHEEEVSALDILSHDGFVENPMSRRPVLDRWTLFHSRGP--EE 300

Query: 218 NKGIRIDHIMLSPEATSL-------LHSA------------RIDTKPR-GWTKP--SDHT 255
               ++D+I LSP            +  A             ++  PR GW +P  SDH 
Sbjct: 301 RHLCQLDYIWLSPALARRNSSRVPEIVRAGQPYRTIFPAGQEVERYPRTGWDRPKASDHC 360

Query: 256 PVIVSLDI 263
           P++++LDI
Sbjct: 361 PLVMTLDI 368


>gi|134291232|ref|YP_001115001.1| endonuclease/exonuclease/phosphatase [Burkholderia vietnamiensis
           G4]
 gi|134134421|gb|ABO58746.1| Endonuclease/exonuclease/phosphatase [Burkholderia vietnamiensis
           G4]
          Length = 263

 Score = 52.1 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 29/263 (11%), Positives = 66/263 (25%), Gaps = 49/263 (18%)

Query: 4   VTVATWNVNS------IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57
           + +AT+N++        RA +  + A I+E + D+I LQE               L    
Sbjct: 29  LRIATYNIHGGYGAWPARA-VERIVAVIRELDADVIALQEV-------------PLG--- 71

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
                              +  +    G                    L    +      
Sbjct: 72  ------------GTRAPDVLAHLRDATGMHAAAGPTIDTPERRYGNAVLSRCPIRAARTL 119

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
            ++  + + + +        A     +   L  + +                        
Sbjct: 120 DLSFHQREPRGALDADIDCSAGPIRVVATHLGLSANERSAQVQRLLAAFDTGAMPVILMG 179

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLY-SFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
           ++ + F + + +               + + W  ++          +D I + P    LL
Sbjct: 180 DINEWFVRGRALQALTTRFRRAPAPRTFPTAWPVFS----------LDRIWIHPG--ELL 227

Query: 237 HSARIDTKPRGWTKPSDHTPVIV 259
               +          SDH P++ 
Sbjct: 228 VDVAVHRS-MLARHASDHYPLVA 249


>gi|308805699|ref|XP_003080161.1| unnamed protein product [Ostreococcus tauri]
 gi|116058621|emb|CAL54328.1| unnamed protein product [Ostreococcus tauri]
          Length = 356

 Score = 52.1 bits (123), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 40/299 (13%), Positives = 73/299 (24%), Gaps = 46/299 (15%)

Query: 3   VVTVATWNVN----------SIRA-----RIHNLAAWIK-ENNPDIICLQETKTEDKNFP 46
            + V +WN+             RA         +   I      D++CLQE      +  
Sbjct: 48  TLRVMSWNLQLLAGPFSGQGGFRADLIKRARKIVQNIIVVAETVDVVCLQEVW---DDAS 104

Query: 47  FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
              L+S                 ++   +   +  H                  ++T  L
Sbjct: 105 RTVLRSGLATTFPYIFSPAAKCGLMVCSKASHVCNHFVKFTHRGGIEARAFEKGVSTTYL 164

Query: 107 RIGNL-YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165
           R+           I +T          R  RF+      E  +    +        +   
Sbjct: 165 RLAQNDACVRVAIILNTHLQSDYWCSGRVARFSQLVCVRESFMRAVRECRGNGYVVERVL 224

Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHH-LYSFWDYYADSWSKNKGI--- 221
                N    + E       +            +D      +F       +    G    
Sbjct: 225 LAGDINVEHGSAEYEHMMHSIFPGAIDLMNSPLNDDDSFRLTFPVARWRHYILKCGRESR 284

Query: 222 --------RIDHIM------LSPEATSL---LHSARID----TKPRGWTKPSDHTPVIV 259
                   RID++M      +S         + S  ++       RG    SDH P++ 
Sbjct: 285 YFDLEPRVRIDYVMDLTPMGVSQGVPPRHKHVDSGYVNRALCRDARGRA-LSDHFPIVA 342


>gi|255322370|ref|ZP_05363516.1| putative endonuclease/exonuclease/phosphatase [Campylobacter showae
           RM3277]
 gi|255300743|gb|EET80014.1| putative endonuclease/exonuclease/phosphatase [Campylobacter showae
           RM3277]
          Length = 445

 Score = 52.1 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 45/256 (17%), Positives = 83/256 (32%), Gaps = 45/256 (17%)

Query: 16  ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75
           A+   ++A IKE N DII LQE   E++    E ++   Y      +     V +    +
Sbjct: 64  AKFKAVSAKIKELNADIIALQEI--ENEMILKELMKDAGYKYFAFSKDKNGPVGLAVLSR 121

Query: 76  PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135
                T +           ++  F ++ Q   + NL+ P                     
Sbjct: 122 IKPEKTQIFSVPNVKTRDILKLDFEVDGQKFSLLNLHFP--------------------- 160

Query: 136 RFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAI 195
              +++  L++               +    +   N      E+       +N+      
Sbjct: 161 ---ARKNPLKQRKTAFITLKSTLIDAEKVVVLGDFNTPYGDKELLGDLATSKNLANLWVF 217

Query: 196 RATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL---LHSARIDTKPRGWTKPS 252
                 H  YS     A          +DH++LS +A S    L+S +I    R   + S
Sbjct: 218 L---PKHERYSHTSLNA----------LDHVLLSKDALSQNYVLNSFKI---ERDGAQIS 261

Query: 253 DHTPVIVSLDIPEPRK 268
           DH  ++  L+  +  K
Sbjct: 262 DHFALVFRLNFDKNAK 277


>gi|147827067|emb|CAN66461.1| hypothetical protein VITISV_035843 [Vitis vinifera]
          Length = 734

 Score = 52.1 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 11/116 (9%), Positives = 38/116 (32%), Gaps = 6/116 (5%)

Query: 4   VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTED--KNFPFETLQSLNYHIET 59
           + + +WNV      ++   +  ++++   D+IC+QETK +   +             I+ 
Sbjct: 514 LKILSWNVRGANESSKRKIIKNYVRDQRVDLICIQETKIQAMSEGIVRSL--GTGRFIDW 571

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
               +      +           +  +   ++  + +         + +    + +
Sbjct: 572 RALNAEGATGGVYGPFTKVAKEGMWEEFGAIRGLWDDPWCLGGDFNITLFQREMSN 627



 Score = 45.2 bits (105), Expect = 0.010,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 23/61 (37%), Gaps = 9/61 (14%)

Query: 201 THHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
               +++     +    N+   R+D  ++SP            T+ R     SDH P+++
Sbjct: 653 QGGEFTW-----NGGLNNQAWARLDRFLVSPSWLDQFSGV---TQSRLSRPISDHFPIVL 704

Query: 260 S 260
            
Sbjct: 705 E 705


>gi|239832253|ref|ZP_04680582.1| endonuclease/exonuclease/phosphatase [Ochrobactrum intermedium LMG
           3301]
 gi|239824520|gb|EEQ96088.1| endonuclease/exonuclease/phosphatase [Ochrobactrum intermedium LMG
           3301]
          Length = 403

 Score = 52.1 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 44/306 (14%), Positives = 78/306 (25%), Gaps = 69/306 (22%)

Query: 25  IKENNPDIICLQET---------------KT----------------------------- 40
           I E   DI+CLQE                K                              
Sbjct: 99  IAETRADILCLQEVDNLAALNAFEYGYLFKMIGHGFRHKYLIDGNDSRGIDVAVMMRDTT 158

Query: 41  EDKN-FPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF 99
            D      + + S  Y            +  L       I      +     A    + F
Sbjct: 159 RDGQPIEVDEVTSYAYVTYNDFGLYEPALGELGLEAHDRIFKRDCLNVDIRIAGKPLSLF 218

Query: 100 TINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159
             + +++                +  +  +  +            +   +  GD+N   +
Sbjct: 219 VTHLKSMTGARNGFDGRTSSLPVRRAEARAIRRIIEDKFGPSNVADRRWLICGDFNDYRE 278

Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK 219
                       +    +E   +   L   GF   +         ++   Y+     +  
Sbjct: 279 RIIIGGDEWNGYEFTPMVEEESALDVLLGDGFAVNLVERRPVMDRWTL--YHTRGPQERH 336

Query: 220 GIRIDHIMLSPEATSLLHSA-------------------RIDTKPR-GWTKP--SDHTPV 257
             ++D+IM SP        A                   +ID  PR GW +P  SDH PV
Sbjct: 337 LCQLDYIMASPSFAKKNERAVPNIVRRGQPWRTIFPPGQQIDRYPRTGWDRPKASDHCPV 396

Query: 258 IVSLDI 263
            V+L++
Sbjct: 397 AVTLNM 402


>gi|170739229|ref|YP_001767884.1| endonuclease/exonuclease/phosphatase [Methylobacterium sp. 4-46]
 gi|168193503|gb|ACA15450.1| Endonuclease/exonuclease/phosphatase [Methylobacterium sp. 4-46]
          Length = 257

 Score = 52.1 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 4/55 (7%)

Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI-PEPRKKQQDST 274
           +R+DH+ +S      +    +   P      SDH P++V LD+ P     + D  
Sbjct: 203 LRLDHVFVSEGI--RVRHVEVVRGPLARV-ASDHLPLLVDLDLAPAAGAPRPDRA 254



 Score = 39.0 bits (89), Expect = 0.78,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 20/44 (45%), Gaps = 11/44 (25%)

Query: 3  VVTVATWNVNSIRARIH--------NLAAWIKENNPDIICLQET 38
          ++ + T+NV   R  +          +AA +    PD++ LQE 
Sbjct: 1  MLRLITYNV---RRCLGTDGTLSPARIAAVLASCRPDVVALQEL 41


>gi|147845934|emb|CAN79905.1| hypothetical protein VITISV_022123 [Vitis vinifera]
          Length = 1420

 Score = 52.1 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 23/41 (56%), Gaps = 2/41 (4%)

Query: 3   VVTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTE 41
           ++ + +WNV      ++   + A I+    D++C+QETK +
Sbjct: 710 MLRLVSWNVRGANDSSKRKVIKAMIRSQRADLVCIQETKIQ 750


>gi|29290093|gb|AAO67564.1| Pol protein [Drosophila virilis]
          Length = 1531

 Score = 52.1 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 41/283 (14%), Positives = 83/283 (29%), Gaps = 39/283 (13%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNF-PFETLQSLNYHIETC 60
           +   +A WN   +R +++ L  ++  +  DI+ L E +       P   +    YH    
Sbjct: 49  NSFKIAYWNAAGVRNKLNELEVFMNRHKIDIMMLVELRLGPSALNPGPPITINGYHTYAA 108

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +   +             + H+  + +  ++           +   I    +       
Sbjct: 109 TRPPPHHRCGGVATLVKHGIKHIALEAIVFESMQSAPVAVTLAKNETIVLAPI------- 161

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
                   S       F           I  GD+N             W  +        
Sbjct: 162 YCPPQYNWSADMFAKLFQHFEKLSGSGFILCGDWNAKH---------SWWGNQRACRRGV 212

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA--TSLLHS 238
           +  + + +    + +     TH  Y+         S+N+   ID I +      T L   
Sbjct: 213 ELLRSIHSNKKLNILATGGATHFPYT---------SRNRPSAID-IAVYRALTMTGLQTH 262

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
           + ID +       SDH P+ + L +    +     T+  + PI
Sbjct: 263 STIDLE-------SDHLPIHIGLRV---GRFPYKQTTMRLLPI 295


>gi|312087189|ref|XP_003145373.1| hypothetical protein LOAG_09798 [Loa loa]
 gi|307759462|gb|EFO18696.1| hypothetical protein LOAG_09798 [Loa loa]
          Length = 293

 Score = 52.1 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 46/302 (15%), Positives = 84/302 (27%), Gaps = 52/302 (17%)

Query: 4   VTVATW----NV-NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN-YHI 57
           +T  TW    NV N +     +    IK  NPD++ LQE    D       +  +    +
Sbjct: 1   MTFNTWLTGNNVENGLAKIAKH----IKRINPDVVALQEI--NDIKRLQHLITEMGKGWV 54

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
                 SY   AIL+K++ I    H     + V+        TIN  +L +         
Sbjct: 55  TAKSTYSYTDTAILTKHKLINRSFHQVSHGMGVKIEIENTNRTINIWSLHLDYQSYGPYA 114

Query: 118 PITST------------------KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159
                                    + +   +  + + A +   +E  ++     +    
Sbjct: 115 AFNKMVTKASQIMAGEIVDGKGRFQNMRELLVDDYFQAAIENSSIEPLIVCGDFNSPSHL 174

Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF----------WD 209
                   +  +             +         +      +   ++          W 
Sbjct: 175 DWTNQTSFLHGDWKFQWPATHMLQNEAGMKDSYRELHPQVLDNPGITWSTVEKMTSSGWS 234

Query: 210 YYADSWSKNKGIRIDHIMLSPEATSLLHS------ARIDTKPRGW--TKPSDHTPVIVSL 261
           +           RID+I       S + S        +  KP  W    PSDH  VI + 
Sbjct: 235 WTIPEPQD----RIDYIFYRGSLLSPIQSYTYQGNVTVYPKPFHWKNDYPSDHFAVITTF 290

Query: 262 DI 263
            +
Sbjct: 291 RL 292


>gi|284992104|ref|YP_003410658.1| endonuclease/exonuclease/phosphatase [Geodermatophilus obscurus DSM
           43160]
 gi|284065349|gb|ADB76287.1| Endonuclease/exonuclease/phosphatase [Geodermatophilus obscurus DSM
           43160]
          Length = 322

 Score = 52.1 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 24/68 (35%), Gaps = 13/68 (19%)

Query: 209 DYYADSWSKNKGIRIDHIMLSPEATSLLHSARI-------------DTKPRGWTKPSDHT 255
           D       + +G  IDHI++S      +    +             D   R     SDH 
Sbjct: 255 DQRFSRRYRGRGELIDHILVSHALVHSVADGDVRTDGAGPTPSIEDDPSRREDAPGSDHR 314

Query: 256 PVIVSLDI 263
           PV+  +D+
Sbjct: 315 PVVAQIDV 322


>gi|312868313|ref|ZP_07728513.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           parasanguinis F0405]
 gi|311096058|gb|EFQ54302.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           parasanguinis F0405]
          Length = 270

 Score = 51.7 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/272 (12%), Positives = 71/272 (26%), Gaps = 14/272 (5%)

Query: 4   VTVATWNVNS-----IRARIHNLAAWIKENNPDIICLQETK--TEDKNFPFETLQSLNYH 56
           +   T N +S     ++ +   L   I E   D+IC QE       +    +        
Sbjct: 1   MKFLTLNSHSWMEENVQQKFETLKEQILEAKYDVICFQEVNQEMSSEAVETDEFYQALPS 60

Query: 57  IETCGQKSYNGVAILS-----KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
                +  +  V +        +       +  G D   +   I +   +    + + N+
Sbjct: 61  AVAIHKDHFVRVLVEELAAQGLHYYWTWAYNHIGYDHLNEGVAILSRQPLKADEILVSNM 120

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
             P                 K     +      ++   F                I+  +
Sbjct: 121 DDPTDYHTRRVAVAHTSVDGKEIAVASVHLSWWDKGFQFEWPRIEKYFSQVGKPFILAGD 180

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
                 +          +   D+     +T   Y+              +RID++  SPE
Sbjct: 181 FNNPAGQEGYETILSSPLELQDSFIEAKETKGTYTVGPGIDGWTDNQVPLRIDYVFASPE 240

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
               +    +    +  +  SDH  +   L +
Sbjct: 241 WD--IQRLHVIFDGQNKSHVSDHYGLEAELSL 270


>gi|188990144|ref|YP_001902154.1| hypothetical protein xccb100_0749 [Xanthomonas campestris pv.
           campestris str. B100]
 gi|167731904|emb|CAP50088.1| putative exported protein [Xanthomonas campestris pv. campestris]
          Length = 288

 Score = 51.7 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/274 (12%), Positives = 70/274 (25%), Gaps = 34/274 (12%)

Query: 4   VTVATWNVNSIR------------ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51
           + V ++NV   R            AR   + + IK+ +PD+   QE  +E   +    L 
Sbjct: 35  LRVMSFNV---RVPVDTDGDKRWQARRGAMVSVIKQTHPDVFGTQELVSEQAGYLTAQLP 91

Query: 52  SLNYHIETCGQKSYNGVA-ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
           +  +  +       +    +    + + +V        D        T+      +    
Sbjct: 92  NYRWFGQGRRGDDSDEHMGVFYDTRALNVVESGNFWLSDTPEVAGSITWGNVLPRMVTWA 151

Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170
           L+    +      ++    +         +        +       +P          + 
Sbjct: 152 LFERRSDKRRFYLFNTHFPYRDEDEPARERSAR-----LILSRIAQLPADIPVVLTGDFN 206

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230
           +D         +                 +T   +S               RID I+   
Sbjct: 207 SDPDKITYPTLTAVLGDARAKAPKRSGPENTFQDFSTHPTR----------RIDWILF-R 255

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
             T             G   PSDH PV+     P
Sbjct: 256 GLTP--TQFTTLDDRPGGVLPSDHYPVLAEFAWP 287


>gi|303238818|ref|ZP_07325350.1| Endonuclease/exonuclease/phosphatase [Acetivibrio cellulolyticus
           CD2]
 gi|302593697|gb|EFL63413.1| Endonuclease/exonuclease/phosphatase [Acetivibrio cellulolyticus
           CD2]
          Length = 616

 Score = 51.7 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 71/265 (26%), Gaps = 52/265 (19%)

Query: 4   VTVATWNV---NSIRARIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYHIET 59
           + +  +NV   N       N   +I + +PDI+ L E  K+       +  +   Y +  
Sbjct: 115 LKIVHFNVLTSNG---EYKNAIEYIDKKDPDIVVLNEVNKSWIDKL--KLFEKYKYSVV- 168

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
              ++ +    ++ Y  IE+         D       A F +    + I   +    +  
Sbjct: 169 ---ETRDDNFGIALYSKIELQNARIEYFGDDGLPSAVAEFNVGDNEVSILGTHPLTPSDK 225

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                   IS+  R  +F S              +  +      Y               
Sbjct: 226 --------ISFNSRNKQFESLIENRNSFSKSMVLFGDLNTTSWSYGFKNLVKGMNLYDSR 277

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           +    +         +                           +DH ++S +        
Sbjct: 278 QGHGIQFSWPTTIPILSVP------------------------LDHCLVSKDIK------ 307

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIP 264
            +  +  G    SDH P+ V L I 
Sbjct: 308 -VLKREMGPNLGSDHRPLYVELRIS 331


>gi|229194746|ref|ZP_04321537.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus m1293]
 gi|228588757|gb|EEK46784.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus m1293]
          Length = 263

 Score = 51.7 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/271 (12%), Positives = 61/271 (22%), Gaps = 19/271 (7%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET------KTEDKNFPFETLQS 52
           + + T N +S +      +I  LA  I+E   D+I LQE       K    N   +    
Sbjct: 1   MKLLTLNCHSWQEENQIEKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGL 60

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           L              +     +   ++                +  F    +        
Sbjct: 61  LLLEELKALHVKDYNITWDFSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTAYWKTR 120

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                 I     +              +     +        +         +       
Sbjct: 121 KIVSATIAYNGKNITFYSCHLGWWNDEEESFKGQVNRLMEHVDSNELSFLMGDFNNNARL 180

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                E                           + WD           +RID I+ +   
Sbjct: 181 QGEGYEYMMQKGLHDTYELAIEKDEGTTVQGEIAGWD------ENKHNLRIDLILCNRS- 233

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              + S+++          SDH  V V +DI
Sbjct: 234 -EKVRSSKVIFNGTNRNIISDHFGVEVQVDI 263


>gi|120612279|ref|YP_971957.1| endonuclease/exonuclease/phosphatase [Acidovorax citrulli AAC00-1]
 gi|120590743|gb|ABM34183.1| Endonuclease/exonuclease/phosphatase [Acidovorax citrulli AAC00-1]
          Length = 252

 Score = 51.7 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 40/282 (14%), Positives = 82/282 (29%), Gaps = 62/282 (21%)

Query: 3   VVTVATWNVN----SI----RARIHNLAAWIKENNPDIICLQET-KTE---DKNFPF--- 47
           ++ +AT+N++     +    R  IHNL   +++ + DI+CLQE  K      ++FP    
Sbjct: 12  ILRIATYNIHKGVQGLGPARRLEIHNLGHAVEQLDADIVCLQEVRKVHRRGARHFPRWPE 71

Query: 48  ----ETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
               E L    Y                     +     + G   +  +        +  
Sbjct: 72  LPQAEFLAPEGYEAVYRTNAF---TRHGEHGNALLTRWPVIGHQHEDMSDHRFELRGLLH 128

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
             + +    +             ++  +++  RF ++ +    PL+ AGD+N        
Sbjct: 129 VEVEVQGRRVHAIVVHLGLIPGSRVRQVEQLQRFVAREVPPGAPLVVAGDFND------- 181

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223
                               ++ +         A                         +
Sbjct: 182 ------WGRQVKHALAAFGLREYEGEPRALTYPARLPLVQ-------------------L 216

Query: 224 DHIMLS--PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           DH+ +         +   RI      W + SDH P+I    +
Sbjct: 217 DHVYVRGMEPMGLHVPRGRI------WWRMSDHLPLIAEFRL 252


>gi|291441116|ref|ZP_06580506.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
 gi|291344011|gb|EFE70967.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
          Length = 331

 Score = 51.7 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 41/271 (15%), Positives = 78/271 (28%), Gaps = 30/271 (11%)

Query: 6   VATWNV--------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFP--FETLQSLN- 54
           V ++N+        +S   R   +   ++   P +I  QE       +P   +    L  
Sbjct: 76  VMSFNLRFASAAEPHSWAVRRPVMRDLLRRERPHVIGTQE-----GLYPQLRDIEADLGP 130

Query: 55  -YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
            Y     G++  +     +     + +  L  D   +                      +
Sbjct: 131 AYDWIGTGREGGSRDEFTAVLYDTQRLVPLEYDHFWLSDTPDVIASNTWGNAFVRMATRV 190

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
              +     +    ++         ++           G             P++   D 
Sbjct: 191 RFRDLRAGGREFHVLNTHLDNASQYARERAAALIADRVGGLG-------RCVPVVVTGDF 243

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY-SFWDYYADSWSKNKGIRIDHIMLSPEA 232
                    +  L   G  D   A  +    Y +F  Y         G RID I+++P  
Sbjct: 244 NVAAHENPVYDTLLGAGLVDTWEAAAERGEPYGTFHGYRP---PVPGGPRIDWILVTPGV 300

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           T  +H A ++T       PSDH PV  +L +
Sbjct: 301 T--VHRASVNTFAPAGRFPSDHLPVQAALTL 329


>gi|239932761|ref|ZP_04689714.1| hypothetical protein SghaA1_31348 [Streptomyces ghanaensis ATCC
           14672]
          Length = 302

 Score = 51.7 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 41/271 (15%), Positives = 78/271 (28%), Gaps = 30/271 (11%)

Query: 6   VATWNV--------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFP--FETLQSLN- 54
           V ++N+        +S   R   +   ++   P +I  QE       +P   +    L  
Sbjct: 47  VMSFNLRFASAAEPHSWAVRRPVMRDLLRRERPHVIGTQE-----GLYPQLRDIEADLGP 101

Query: 55  -YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
            Y     G++  +     +     + +  L  D   +                      +
Sbjct: 102 AYDWIGTGREGGSRDEFTAVLYDTQRLVPLEYDHFWLSDTPDVIASNTWGNAFVRMATRV 161

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
              +     +    ++         ++           G             P++   D 
Sbjct: 162 RFRDLRAGGREFHVLNTHLDNASQYARERAAALIADRVGGLG-------RCVPVVVTGDF 214

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY-SFWDYYADSWSKNKGIRIDHIMLSPEA 232
                    +  L   G  D   A  +    Y +F  Y         G RID I+++P  
Sbjct: 215 NVAAHENPVYDTLLGAGLVDTWEAAAERGEPYGTFHGYRP---PVPGGPRIDWILVTPGV 271

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           T  +H A ++T       PSDH PV  +L +
Sbjct: 272 T--VHRASVNTFAPAGRFPSDHLPVQAALTL 300


>gi|308470916|ref|XP_003097690.1| hypothetical protein CRE_14178 [Caenorhabditis remanei]
 gi|308239808|gb|EFO83760.1| hypothetical protein CRE_14178 [Caenorhabditis remanei]
          Length = 531

 Score = 51.7 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/289 (13%), Positives = 82/289 (28%), Gaps = 43/289 (14%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENN---PDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           + + T+N  S+ A  + LA  ++E N    DII L ETK                     
Sbjct: 21  LRICTFNCRSV-ATDNRLAELLEETNRIKYDIIGLSETK----------------RSAEV 63

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
              + +G  ++   +    V+   G   +           I +  +    L +       
Sbjct: 64  HMTNRDGTGVILGKRNDSSVSGGVGFIFNKSLMPKIKEIKIVSHRIGYITLQVNKNQCTI 123

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
              Y     + +       + L  +        Y ++    +        N+        
Sbjct: 124 IQGYAPTADYEEEEHSNFYENL-EDVYKSCKSRYKMVIGDFNARIGERKGNEVFIGPHSM 182

Query: 181 Q---------SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
           +         +     N  F    +    TH  +++         +     +DHI+ +  
Sbjct: 183 EKRNDSGERLATFCEVNRVFHMNSQFIKPTHRRWTYISPDKQHRHE-----LDHILANG- 236

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
               +    +      +T  SDH  +   + I   + K +    +  KP
Sbjct: 237 --KYITDVSV---VPSFTNGSDHRMLRAKIHINAKQAKYEQV--KRRKP 278


>gi|301060638|ref|ZP_07201465.1| endonuclease/exonuclease/phosphatase family protein [delta
           proteobacterium NaphS2]
 gi|300445250|gb|EFK09188.1| endonuclease/exonuclease/phosphatase family protein [delta
           proteobacterium NaphS2]
          Length = 293

 Score = 51.7 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 45/268 (16%), Positives = 89/268 (33%), Gaps = 32/268 (11%)

Query: 2   SVVTVATWNVN---SIRARIHNLAAWIKENN-PDIICLQETKTEDKNFPFETLQSLNYHI 57
           + ++V T+N+      R  + N+ A ++    PD++ LQE + E             +H+
Sbjct: 46  ASLSVMTYNIWDLGGKRPVLKNVEAVVRGAGIPDVLLLQEVRGEKMAASLAGSLGFPHHL 105

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
               +    GV+ILS+Y  IE                + AT     + LR+ +++L   +
Sbjct: 106 YRAARGHGYGVSILSRYPLIESGFFYFK-SSKSGRGVLGATVVFEGRKLRLCSVHLDRID 164

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
            I   +    +SW +         L  E          +        +  +       T+
Sbjct: 165 SIDVDQQGAHLSWDEAVSL-----LAHETTNETVRSRCVKELLAWAGSDRVIIGGDFNTI 219

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI----RIDHIMLSPEAT 233
              ++ +K++ +        +      Y+             G+    R+D +  S E  
Sbjct: 220 FCSKAVRKMETVFEDALAGTSDYLTGTYT-----------KSGLPVAPRLDFLFYSKELA 268

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSL 261
                A +  +  G     DH PV    
Sbjct: 269 --CLKAHVVRESAG-----DHYPVKAVF 289


>gi|229009858|ref|ZP_04167078.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides DSM 2048]
 gi|228751476|gb|EEM01282.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides DSM 2048]
          Length = 263

 Score = 51.7 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/271 (12%), Positives = 66/271 (24%), Gaps = 19/271 (7%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET--KTEDKNFP----FETLQS 52
           + + T N +S +      +I  LA  I+E + D+I LQE     + +N       +    
Sbjct: 1   MKLLTLNCHSWQEENQIEKIKYLAKAIQEEDYDVIALQEVSQSIQAENVCGNKKKDNFGL 60

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           L              +     +   ++                +  F    +        
Sbjct: 61  LLLEELRALNVKEYNIIWDFSHIGYDVYEEGLAIITKHNIVKEDTFFVSENKDTTYWKTR 120

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                 I     +              +    ++        N         +       
Sbjct: 121 KIVSATIAYNDKNITFYSCHFGWWNDEEESFKDQVDRLMERVNSNELSFLMGDFNNNARL 180

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                E                           + WD         + +RID I+ +   
Sbjct: 181 EGEGYEYTMQKGLYDTYELAIEKDEGTTVQGEIAGWD------ENKQNLRIDLILSNQS- 233

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              ++S+++          SDH  V V LDI
Sbjct: 234 -KTVNSSKVIFNGTNRNVISDHFGVEVQLDI 263


>gi|225448227|ref|XP_002266265.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 192

 Score = 51.7 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 23/41 (56%), Gaps = 2/41 (4%)

Query: 4  VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTED 42
          + + TWNV      ++   +  +I+    D++C+QETK ++
Sbjct: 3  MKIITWNVRGANDSSKRKIIKNYIRNQRVDLMCIQETKIQE 43


>gi|153836873|ref|ZP_01989540.1| metal-dependent hydrolase [Vibrio parahaemolyticus AQ3810]
 gi|149749831|gb|EDM60576.1| metal-dependent hydrolase [Vibrio parahaemolyticus AQ3810]
          Length = 288

 Score = 51.7 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 42/277 (15%), Positives = 78/277 (28%), Gaps = 24/277 (8%)

Query: 2   SVVTVATWNV-----NSIRARIH-----NLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51
           + + + +WN+     N  +          L  ++ +   DII  QE    D     +   
Sbjct: 20  NSINLTSWNIEWLSINGGKVSRTSDDFVKLNQYVDKTQADIIAFQEV---DSKAAVQKAV 76

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
              Y I    +   N      ++      T          +   + + T +   LR  + 
Sbjct: 77  GDGYAIYLSDRAQSNN--KHLQFSDTNQYTGFAVRKDIEVSDPADFSITRDNSKLRFASY 134

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
            + + +                   + + R               + +            
Sbjct: 135 IVVNPSQKDELHLLSVHLKAGCSGAYKNSRDCQTLSQQGEALAKWMSEREKKKEQYAVMG 194

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
           D    L  ++ +         DA   T DT            S +      IDHI++SP+
Sbjct: 195 DFNHNLSYQRDWLWAIMTLGNDAQLVTRDTQADCKVRSNKNPSKTHQFRSLIDHIIVSPQ 254

Query: 232 ATSLLHSA----RIDTKPRGWTKPSDHTPV--IVSLD 262
                 +A     I      + K SDH PV   V+L+
Sbjct: 255 I--KAKNAHQTLFISQDVLDY-KLSDHCPVNATVTLN 288


>gi|323448661|gb|EGB04556.1| hypothetical protein AURANDRAFT_72478 [Aureococcus
          anophagefferens]
          Length = 1523

 Score = 51.7 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 22/64 (34%), Gaps = 20/64 (31%)

Query: 6  VATWNVNSIRA----------RIHN----------LAAWIKENNPDIICLQETKTEDKNF 45
          + +WNV   R                         L +W++    D++CLQE K +  + 
Sbjct: 7  LISWNVAGWRTTLEEMTRTTKARKGRSPEEEHQAALRSWLERLRADVVCLQEVKLKRSDV 66

Query: 46 PFET 49
            + 
Sbjct: 67 EAQA 70



 Score = 42.1 bits (97), Expect = 0.094,   Method: Composition-based stats.
 Identities = 7/39 (17%), Positives = 15/39 (38%)

Query: 198 THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
                  ++ W  Y +   +N G RID++++        
Sbjct: 389 HPQRSERFTCWHQYHNKRYENVGSRIDYVLVDRALFEAA 427


>gi|228989540|ref|ZP_04149525.1| Endonuclease/exonuclease/phosphatase [Bacillus pseudomycoides DSM
           12442]
 gi|229003360|ref|ZP_04161190.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock1-4]
 gi|228757978|gb|EEM07193.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock1-4]
 gi|228770265|gb|EEM18844.1| Endonuclease/exonuclease/phosphatase [Bacillus pseudomycoides DSM
           12442]
          Length = 263

 Score = 51.7 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 43/286 (15%), Positives = 81/286 (28%), Gaps = 49/286 (17%)

Query: 4   VTVATWNVNS---------IRARIHNLAAWIKENNPDIICLQET----KTED-------K 43
           + + T N +S         IR    +LA  I+E   D+I LQE     K ++        
Sbjct: 1   MKLLTLNCHSWQEENQIEKIR----HLAKTIQEEGYDVIALQEVSQSIKAQNVCGNKKKD 56

Query: 44  NF------PFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA 97
           NF        E L S NY+I          +         +            +++    
Sbjct: 57  NFGLVLLAELEKLGSGNYNIVWDYSHIGYDIYEEGSAIITKHPIVKQDSFFVSESK---- 112

Query: 98  TFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII 157
               +T   +   +     +                     + + +++       +  + 
Sbjct: 113 ----DTSYWKARKIVSATVSYKGKNMTFYSCHLGWWNDEEETFQGQVDCLTQHVNENELS 168

Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK 217
               D  N    + +    L  +  +   +     D              WD        
Sbjct: 169 ILMGDFNNNARLQGEGYDYLMQKGLYDTYELAFKKDEGTTVQGKIAG---WD------EN 219

Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            + +RID I+ +      + S+++          SDH  V V LDI
Sbjct: 220 KQNLRIDLILSNKP--KTVISSKVIFNGINRNIISDHFGVEVQLDI 263


>gi|121999171|ref|YP_001003958.1| endonuclease/exonuclease/phosphatase [Halorhodospira halophila SL1]
 gi|121590576|gb|ABM63156.1| Endonuclease/exonuclease/phosphatase [Halorhodospira halophila SL1]
          Length = 277

 Score = 51.7 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/287 (12%), Positives = 71/287 (24%), Gaps = 65/287 (22%)

Query: 2   SVVTVATWNV-NSI-------------------RAR---IHNLAAWIKENNPDIICLQET 38
           + + V ++N+ N+I                   R R   +  +  WI     D++ LQE 
Sbjct: 26  ATIRVVSYNIQNAIATSRYHHYFTRGWKHVLPDRQRQGNLERIGGWI--EPYDLVGLQEV 83

Query: 39  KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT 98
                                               Q   +          +Q       
Sbjct: 84  -------------------------DAGSFRTGFMNQVEHLAYKADFPYWYIQTNRNMGR 118

Query: 99  FTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP 158
               +  L                    + +   RF   +     ++  +       +  
Sbjct: 119 LAQQSNGLLARYRPAEIREHRLPGLIPGRGALQIRFGSGSEALNVIQVHMALGRRTRMRQ 178

Query: 159 QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN 218
                       +         Q+    + +        +   H L++F  +       N
Sbjct: 179 MDFLAELVNAHRHIIVMGDLNCQADS-PELLRLGRRTDLSEPIHGLHTFPSWRPKH---N 234

Query: 219 KGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
               IDHI++S      +  AR+          SDH P+ + L +PE
Sbjct: 235 ----IDHILISSTL--QVQRARVLEHAL-----SDHLPIAMELALPE 270


>gi|325189144|emb|CCA23669.1| conserved hypothetical protein [Albugo laibachii Nc14]
 gi|325190842|emb|CCA25330.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 291

 Score = 51.7 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/275 (13%), Positives = 80/275 (29%), Gaps = 22/275 (8%)

Query: 4   VTVATWNV------NSIRA---RIHNLAAWIKENNPDIICLQE-TKTEDKNFPFETLQSL 53
           + + T+N+      +  R    R  ++   I   +P I+  QE    +  +     +   
Sbjct: 23  LKIMTFNLRYANTEDGPRGWIYRKDHVIDIINRYHPAIMGTQEGLADQLDDIDKNLIHPY 82

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
                       +            I         +    F    +  +   L     + 
Sbjct: 83  KRFGIEREPNGEHEEIFYDTSVVELI-KGGNFWLSETPDTFGTLGWDADCVRLVTWCHFQ 141

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
                     ++ +   +    R  + RL  +     AG   I+       +   + +D 
Sbjct: 142 LIETKQLFYVFNTQFDHVGAISRQKAARLLWDRIKTIAGTDAIV---FTLGDFNTYRHDP 198

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI----RIDHIMLS 229
            +    +     +    +T+A     D    Y  W+    ++    G+     ID +   
Sbjct: 199 TYKFFTQDEAGPMFQDAWTNATSKVGDVSCTYHAWE--GPAYHLENGVVGANHIDWLFSR 256

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
           P     +   ++ T+ R    PSDH P+   + +P
Sbjct: 257 PNL--KVLETKVITEERNGFHPSDHYPMQTEILLP 289


>gi|325268539|ref|ZP_08135169.1| AP endonuclease domain protein [Prevotella multiformis DSM 16608]
 gi|324989067|gb|EGC21020.1| AP endonuclease domain protein [Prevotella multiformis DSM 16608]
          Length = 366

 Score = 51.7 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/274 (14%), Positives = 78/274 (28%), Gaps = 38/274 (13%)

Query: 4   VTVATWNVNSIRAR-IHN-----LAAWIKENNPDIICLQETKT----EDKNFPFETLQSL 53
           + V ++NV               +  +I ++  DI+CLQE +      D+ +P       
Sbjct: 101 IKVLSYNVFMFSTWSEPGGEQNPIVDYILKSKADIVCLQEAQADVEGTDRIYPALKKHYP 160

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL--RIGNL 111
            + +    +   + + +LS+Y  +   +   G   +    ++       T  +     + 
Sbjct: 161 YFRLMVKKKPGADHMVLLSRYPVLWQDSIPYGSGSNQSVAYLVDIKGTKTLVVNNHFESN 220

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLEL------EEPLIFAGDYNIIPQPHDCYN 165
            L  G+                    +   L                    + +  D   
Sbjct: 221 GLSTGDKENFKTLVKGDMDTHDARNESFHLLRKLGEVSARRAPQAVAVARYVRKYLDRKV 280

Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI--RI 223
           P+I   D   +          + +                    Y+        G+  RI
Sbjct: 281 PVILCGDFNDSPLSYTHRTIARELTDCYVASGNGPGI------SYHR------SGMYFRI 328

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257
           DHI  S +       A++D       + SDH PV
Sbjct: 329 DHIFCSDDFEPY--GAKVDDSA----ETSDHYPV 356


>gi|239980898|ref|ZP_04703422.1| hypothetical protein SalbJ_15743 [Streptomyces albus J1074]
 gi|291452759|ref|ZP_06592149.1| conserved hypothetical protein [Streptomyces albus J1074]
 gi|291355708|gb|EFE82610.1| conserved hypothetical protein [Streptomyces albus J1074]
          Length = 290

 Score = 51.7 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/277 (12%), Positives = 67/277 (24%), Gaps = 44/277 (15%)

Query: 4   VTVATWNVN-SIRARIHNLAAW------IKENNPDIICLQET------KTEDKNFPFETL 50
           + VAT+N++    A    +         ++  + D+I LQE       +++ ++   E  
Sbjct: 38  LRVATYNIHAG--AGEDEVFDLDRQVRALRSLDADVIGLQEVDVHWGERSQWRDLARELA 95

Query: 51  QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
             L  H+      S +     +   P      +         R      T  +       
Sbjct: 96  HRLGMHVAFAPIYSLDPEPAAAGPTPPRREFGVAVLSRHPVLRVRNHEITRLSTQGENPL 155

Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170
                G    +         +            +    +      +           +  
Sbjct: 156 PEPGPGFLQATVAVRGIPLDVYATHLDYRPDPAVRAAQVADMLRVMDRPCPVRCPAHLLL 215

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230
            D     +  +       +   D    T                       RID++  S 
Sbjct: 216 GDFNARPDAPELTPLWATLRDADPGAPTFPASAP---------------DRRIDYVATSA 260

Query: 231 EATSLLHSARIDTKPRGWTKP----SDHTPVIVSLDI 263
                          R WT P    SDH PV+  L +
Sbjct: 261 GIGLR----------RAWTAPTGIASDHLPVVADLHL 287


>gi|218264592|ref|ZP_03478387.1| hypothetical protein PRABACTJOHN_04093 [Parabacteroides johnsonii
           DSM 18315]
 gi|218221900|gb|EEC94550.1| hypothetical protein PRABACTJOHN_04093 [Parabacteroides johnsonii
           DSM 18315]
          Length = 373

 Score = 51.7 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 44/289 (15%), Positives = 75/289 (25%), Gaps = 47/289 (16%)

Query: 2   SVVTVATWNVNSIRARIHN--------LAAWIKENNPDIICLQETKT-EDKNFP-----F 47
           +V+ V T+NV                 +  +I  +  DI+CLQE      KNF       
Sbjct: 105 NVLKVLTYNVMGFG--YKGHTEDSPNPIIRYIANSGADIVCLQEYAVGTSKNFLTNQKIA 162

Query: 48  ETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107
             L+   Y        S      ++ +    I                     IN + L 
Sbjct: 163 NALKMYRYRSIIPIGTSGTLKFNIAVFSKYPISKSRKIKYESSFNGSSIHELNINGKKLT 222

Query: 108 IGNLYLPHGNPITSTKYDDKISWIK-----------RFLRFASQRLELEEPLIFAGDYNI 156
           + N +L         +                       +      ++      A    I
Sbjct: 223 LINNHLESFKLTMEDRSHYSAFIKNLNSETLDGLRSSIEQKLGPAFQIRARQARAVAEEI 282

Query: 157 IPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS 216
                D        ND   +   R     L++             +  + ++        
Sbjct: 283 KKIDTDYILVCGDFNDTPISYAHRTIQGPLKDAYAASGRGVGVTYNENFFWF-------- 334

Query: 217 KNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
                RID+I+ S        +  ID       + SDH P+   L + E
Sbjct: 335 -----RIDNILHSANMKP--INCTIDK-----VRYSDHYPMWCYLQLKE 371


>gi|260776998|ref|ZP_05885892.1| putative phospholipase C [Vibrio coralliilyticus ATCC BAA-450]
 gi|260606664|gb|EEX32938.1| putative phospholipase C [Vibrio coralliilyticus ATCC BAA-450]
          Length = 441

 Score = 51.7 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/287 (12%), Positives = 77/287 (26%), Gaps = 47/287 (16%)

Query: 2   SVVTVATWNVN---------SIRARIHNLAAWIKENNPDIICLQETKTE-DKNFPFETLQ 51
           + + + T+N+            R  +  +  ++K    D++ LQE      + F  E  +
Sbjct: 176 NTLKLMTYNIWALPVIASHIGDRYAL--IPEYVK--GYDVLALQEVFASGREEFLRELAK 231

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
              Y  +   +   N             + +                         I   
Sbjct: 232 EYPYQTKMLDKDGINIYDGGVTIVSRYPIVNQAQYVFPDCTGTDCFADKGVNYAEVIK-- 289

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
                       +    +          ++ + ++    A   NI       Y+     N
Sbjct: 290 -----GGKAYHVFATHTASFDTDTARDYRQRQFKQIRELATLLNIPSNETVVYSGDFNVN 344

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYS--FWDYYADSWS-------KNKGIR 222
                                  + A    +  Y+   +D   + ++       +N    
Sbjct: 345 K---------RKFPGDYQQMIANLSAIEPQYSGYTESTFDPRINDFAGEAMSGGENVEY- 394

Query: 223 IDHIMLSPE-ATSLLHSARID----TKPRGWTK--PSDHTPVIVSLD 262
           +D++M+S E A    +  R+D    T  R W     SDH PV   + 
Sbjct: 395 LDYVMVSDEYAVKAFNDNRVDVPRSTDERLWKHYNLSDHFPVSAVIK 441


>gi|242039787|ref|XP_002467288.1| hypothetical protein SORBIDRAFT_01g022760 [Sorghum bicolor]
 gi|241921142|gb|EER94286.1| hypothetical protein SORBIDRAFT_01g022760 [Sorghum bicolor]
          Length = 391

 Score = 51.7 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 42/288 (14%), Positives = 78/288 (27%), Gaps = 48/288 (16%)

Query: 2   SVVTVATWNVNS------IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55
           +   + T+NV        IR R+  L   IK+++PD IC QE                 Y
Sbjct: 116 TTFKIMTYNVWFREDVEVIR-RMDALGDLIKQHSPDFICFQEI------------TPYIY 162

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
            +            +LS  + I++  +                F  +     +    +  
Sbjct: 163 MLLQKSDWWQQYKCLLSHEKAIQMPYYCMQLSKLPVKASDCTPFLNSIMGRELCFTSVST 222

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI-IPQPHDCYNPIIWENDAC 174
           G           +           Q    E          I    P+      +  +D  
Sbjct: 223 GEMKKLMIGTTHLESPCPAPPKWDQMYSKERVDQAKQCLEILGRFPNAILCGDMNWDDKG 282

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI--RIDHI------ 226
                          G+TDA          +++        S N+ +  R+D        
Sbjct: 283 DGPFP-------LQDGWTDAWVELKPGEDGWTYDTKANGMLSGNRKLQKRMDRFVCKLAD 335

Query: 227 --MLSPEATSL--------LHSARIDTKPRGWT---KPSDHTPVIVSL 261
             ++S E                +I  + R       PSDH  +++++
Sbjct: 336 FKIVSIEMIGKEAIPGVSYYKETKIRKESRMVELPVFPSDHFGLVLTI 383


>gi|160900734|ref|YP_001566316.1| endonuclease/exonuclease/phosphatase [Delftia acidovorans SPH-1]
 gi|160366318|gb|ABX37931.1| Endonuclease/exonuclease/phosphatase [Delftia acidovorans SPH-1]
          Length = 289

 Score = 51.7 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/301 (11%), Positives = 74/301 (24%), Gaps = 55/301 (18%)

Query: 3   VVTVATWNVN---SIRARIH---NLAAWIKENNPDIICLQETKT-----------EDKNF 45
           ++ + TWN      +  R+     +A  +   + D++CLQE              + +  
Sbjct: 1   MMQILTWNTQWCLGLDGRMDPERIVAHALSMADIDVLCLQEIAVHYPGLQGAPGDQVEQV 60

Query: 46  PFETLQSLNYHI--------ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA 97
                +                  Q+  N VA       +         D  V++     
Sbjct: 61  RAALPEGWKVFFGAAVDEFTAVGRQRFGNLVATRLPVLQLAHHRLPYPHDGGVRSMPRCC 120

Query: 98  TFTINTQ----TLRIGNLYLPHGNPITSTKY-------------DDKISWIKRFLRFASQ 140
           T           +R+ + +L + +                      +            Q
Sbjct: 121 TAATVMDAALGPVRVMSTHLEYFSRRQRMAQALALRSLQIEALGQAEAPPQPASDGSPQQ 180

Query: 141 RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHD 200
                   +  GD+N  P   +            +      +    Q       +     
Sbjct: 181 TKPHTPHAVLCGDFNFEPHEDEYAGL-----SRPWAAGEEGALTAGQWHNSWSVLHPDQP 235

Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
               +  +D              D   +S      +    +D+  R     SDH PV++ 
Sbjct: 236 QPPTFRLFDRQWGPEPGAC----DFAWVSDSLRGHVRGWAVDSDTR----LSDHQPVLLQ 287

Query: 261 L 261
           L
Sbjct: 288 L 288


>gi|315648386|ref|ZP_07901485.1| Endonuclease/exonuclease/phosphatase [Paenibacillus vortex V453]
 gi|315276080|gb|EFU39426.1| Endonuclease/exonuclease/phosphatase [Paenibacillus vortex V453]
          Length = 494

 Score = 51.7 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/268 (13%), Positives = 76/268 (28%), Gaps = 27/268 (10%)

Query: 4   VTVATWNVNSIR----------ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + + ++N   +R           R   +   I EN PD+I  QE     +          
Sbjct: 38  LRIMSFN---LRYAANDHQPWENRRPVMRNLILENQPDVIGTQE--GLHRQIVDLENDLP 92

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
            Y     G++       ++ +  ++ +  L      +       +       +     ++
Sbjct: 93  GYGRIGVGREGGEFGEYMAVFYKMDRLKPLEQSHFWLSDTPQIISSASWGNQIPRMVTWV 152

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
              +      +    + +      + Q+          G    IP            N  
Sbjct: 153 RFQDLRNGKTFYMVNTHLDHQSEVSRQKSAALIIDKMKGFAPDIPV-----VMTGDFNTV 207

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYS-FWDYYADSWSKNKGIRIDHIMLSPEA 232
             +           + G   A + T+D    +  + D          G RID I+ S   
Sbjct: 208 PGSDTYSIFTSNGLSDGHITAKKHTNDDLGTFHNYKDPTGGG----SGNRIDWILHSTGW 263

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVS 260
              +  + I         PSDH P++++
Sbjct: 264 --NVLHSEIINYNEEGQYPSDHYPIMIT 289


>gi|146297973|ref|YP_001192564.1| endonuclease/exonuclease/phosphatase [Flavobacterium johnsoniae
           UW101]
 gi|146152391|gb|ABQ03245.1| Endonuclease/exonuclease/phosphatase [Flavobacterium johnsoniae
           UW101]
          Length = 305

 Score = 51.7 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 41/273 (15%), Positives = 78/273 (28%), Gaps = 38/273 (13%)

Query: 6   VATWNVNSIRARIHNLAAWIK-------------ENNPDIICLQETKTEDKNFPFETLQS 52
           V ++NV     R+ N+  W+              E +PDI+C+QE  +   +   +    
Sbjct: 57  VMSYNV-----RLFNVFKWLDRDDIPENIKGFIDEKDPDILCIQEY-SNSAHLDLKVYP- 109

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
            + +I   G++   G AI SK+  I+                + A        +R+ N++
Sbjct: 110 -HRYIFIDGKQIKTGQAIFSKFPIIDEGK---IVFPKSDNNVVYADIKRGKDIIRVYNMH 165

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
           L                      +       + +      +   I + H           
Sbjct: 166 LQSIKISPDVSEISDDIDNVNQKKSQRIYARISKGFTQQQEQAEIFKEHIKKCKYPIIIC 225

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                       +       DA     +         Y    +      RID+I    + 
Sbjct: 226 GDMNNSPFSYVYRNIKGKLKDAFEEAGEGFGA----TYKFKYYPA----RIDYIFTDTKM 277

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
                 +  D +       SDH P++  L I +
Sbjct: 278 KVKQFESFPDFEN------SDHYPIMTRLSIDQ 304


>gi|73748062|ref|YP_307301.1| endonuclease [Dehalococcoides sp. CBDB1]
 gi|73659778|emb|CAI82385.1| probable endonuclease [Dehalococcoides sp. CBDB1]
          Length = 639

 Score = 51.7 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/268 (12%), Positives = 73/268 (27%), Gaps = 47/268 (17%)

Query: 4   VTVATWNV-NSIRAR----IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           + + T+N+ N    +    +  LA  I+++  D++ LQE                     
Sbjct: 412 LRIMTYNLHNGFNTQGKLDMEALARVIEDSGADVVALQEI------------------SR 453

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
                    +      +                   +     ++T  + + +  LP    
Sbjct: 454 GWVISGRVDMLEWLSQRLNMYSAFGATAGEYWGNAILSKYPILDTHNVSLESEELPIKRG 513

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
             +   D    ++           E  +  +           +     I+ + +A    E
Sbjct: 514 YLNAVLDLGGRYLYLAATHLHHVPEEGDVRLIQAGELADFWDNAPATIILGDFNAEPDSE 573

Query: 179 VRQSFQKL--QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
                ++    +         T+ +  LY                RID+I  SPE    +
Sbjct: 574 EIGLLRQAGLSDSLEGQTSVLTYHSADLY---------------QRIDYIWASPEI-EYI 617

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDIP 264
            S  I +        SDH  +I  + + 
Sbjct: 618 DSYTIVS------LASDHLAIIADIRLS 639


>gi|298386889|ref|ZP_06996444.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 1_1_14]
 gi|298260563|gb|EFI03432.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 1_1_14]
          Length = 315

 Score = 51.7 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 42/292 (14%), Positives = 78/292 (26%), Gaps = 45/292 (15%)

Query: 4   VTVATWNV-----------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52
           +TVA++N+           +    R   +A  ++ ++ DI   QE          E L  
Sbjct: 27  LTVASYNLRNANGSDSARGDGWGQRYPVIAQIVQYHDFDIFGTQECFLHQLKDMKEALPG 86

Query: 53  LNY-HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
            +Y  +     K     + +        +       L          +      +     
Sbjct: 87  YDYIGVGRDDGKDKGEHSAIFYRTDKFDIVEKGDFWLSETPDVPSKGWDAVLPRICSWGH 146

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
           +           ++  +  I +  R  S  L  E+        N+              N
Sbjct: 147 FKCKDTGFEFLFFNLHMDHIGKKARVESAFLVQEKMKELGRGKNLP------AILTGDFN 200

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
                        K       +     +  +  ++ +D   +S+++    RIDHI +SP 
Sbjct: 201 VDQTHQSYDAFVSKGVLCDSYEKCDYRYALNGTFNNFD--PNSFTE---SRIDHIFVSPS 255

Query: 232 A--------------------TSLLHSA--RIDTKPRGWTKPSDHTPVIVSL 261
                                   +      I  K      PSDH PV V L
Sbjct: 256 FHVKRYGVLTDTYRSVRENSKKEDVRDCPEEITIKAYEARTPSDHFPVKVEL 307


>gi|320162825|gb|EFW39724.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 284

 Score = 51.7 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 31/104 (29%), Gaps = 32/104 (30%)

Query: 1  MSVVTVATWNVNSI-----------------RARIHNLAAWIKENNPDIICLQE------ 37
          M  + + TWN++ +                 R     +      ++ DI+CLQE      
Sbjct: 1  MPRLRILTWNISGLDISDASPPGETIATKLERLAF-GMLD----HDADILCLQEFPVPSD 55

Query: 38 TKTEDKNFPFE----TLQSLNYHIETCGQKSYNGVAILSKYQPI 77
          ++       FE      + L +              IL K   +
Sbjct: 56 SRMPAHQKTFESLSKLFRELGWEFVNSAPSHCGWSCILVKQPWL 99


>gi|159900071|ref|YP_001546318.1| endonuclease/exonuclease/phosphatase [Herpetosiphon aurantiacus
           ATCC 23779]
 gi|159893110|gb|ABX06190.1| Endonuclease/exonuclease/phosphatase [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 319

 Score = 51.7 bits (122), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 48/261 (18%), Positives = 77/261 (29%), Gaps = 43/261 (16%)

Query: 4   VTVATWNV--NSIRARIHNLAAWIKENNPDIICLQETKTE-DKNFPFETLQSLNYHIETC 60
           + + TWNV  N     I  LAA I++  PDI+ LQE   + D   P E L+ L  +    
Sbjct: 94  LRIMTWNVFYN--TQDIAGLAATIRQQQPDIVVLQEYNFQLDPQLP-EALEDLYPYAALD 150

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
                 G+A LS++   E+     G D         AT    T+ +              
Sbjct: 151 PHSGAGGLATLSRWPLRELAPVARGVDSCGCQYLEIATPNGPTRLINTHPH------IPL 204

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
           ++         +        +L  ++                        N         
Sbjct: 205 ASFKGIYTKTQQDPTFDHLLKLIADQSQPLI--------------LAGDLNTTERQPNYL 250

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           +  Q+L +                Y+F      +  K    R+D+IM +           
Sbjct: 251 RLRQQLGDAYQQQGWGL------GYTFPSN--GAIPKAV--RLDYIMPNAHWQP------ 294

Query: 241 IDTKPRGWTKPSDHTPVIVSL 261
                 G    SDH  V+  L
Sbjct: 295 -LRAWNGTANLSDHGFVVADL 314


>gi|218709697|ref|YP_002417318.1| putative phospholipase C precursor [Vibrio splendidus LGP32]
 gi|218322716|emb|CAV18892.1| putative phospholipase C precursor [Vibrio splendidus LGP32]
          Length = 444

 Score = 51.3 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 44/285 (15%), Positives = 87/285 (30%), Gaps = 43/285 (15%)

Query: 2   SVVTVATWNVNSIRA-------RIHNLAAWIKENNPDIICLQETKTE-DKNFPFETLQSL 53
           + + V T+N+ ++ A       R   +  ++K    D++ LQE        F  E  +  
Sbjct: 179 NTLKVITYNIWALPAIASHIGDRYDLIPQYVK--GYDVLALQEVFANGRDEFLRELAKEY 236

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
            Y  +   +   N             + +                         I N   
Sbjct: 237 PYQTKMLDKDGINIYDGGVIIVSRYPIVNEAQYVFPDCTGTDCFADKGVNYAEVIKNGQA 296

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
            H     +  +D   +   R         + ++    A   NI       Y+     N  
Sbjct: 297 YHVFGTHTASFDTDTARDYRQ-------RQFKQMRALAQSLNIPASETVVYSGDFNVNKL 349

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYS--FWDYYADSWS-------KNKGIRID 224
            F  + +Q F  LQ             T+  Y+   +D   ++++       +N    +D
Sbjct: 350 KFPDDYQQMFANLQADK---------PTYSGYTASTFDPRINNFAGEPMSGGENVEY-LD 399

Query: 225 HIMLSPEATSLLH-SARID------TKPRGWTKPSDHTPVIVSLD 262
           ++++S E  +  H   R+D      ++       SDH PV   + 
Sbjct: 400 YVVVSSEYAAKAHNDNRVDVPRSTSSELWKHYNLSDHFPVSAVIK 444


>gi|327312514|ref|YP_004327951.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           denticola F0289]
 gi|326944378|gb|AEA20263.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           denticola F0289]
          Length = 290

 Score = 51.3 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/249 (15%), Positives = 77/249 (30%), Gaps = 18/249 (7%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQP 76
           R   L  +I    P +   QE      +   + L+  +Y I              + +  
Sbjct: 46  RCPQLCDFINFEQPAVFGTQEVLATQLHDLLQGLEGYDY-IGVGRDDGREEGEYAAIFYR 104

Query: 77  IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
            +++  L   +  +       +   +   +RI           T+ K     +     + 
Sbjct: 105 KDLLKLLDSGNFWLSQTPDHPSLGWDAACIRICTW--GKFEDKTTGKQFYFFNTHMDHVG 162

Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIR 196
             ++R      L   G            +  + + D  + +  R +  +         + 
Sbjct: 163 TVARRESTRLILQRIGQLAKSQPTILTGDFNVDQTDEIYGIFSRSAILRDCYAHARQRMA 222

Query: 197 ATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK----PS 252
            T       ++ D+  DS S     RIDH+ +S +    +    I T    + K     S
Sbjct: 223 PTG------TWNDFMQDSRSN---ARIDHVFVSSDFD--IQHYAIFTNSYWFGKSRRNIS 271

Query: 253 DHTPVIVSL 261
           DH PV+V L
Sbjct: 272 DHYPVMVKL 280


>gi|229170375|ref|ZP_04298048.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH621]
 gi|228613072|gb|EEK70224.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH621]
          Length = 263

 Score = 51.3 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/271 (12%), Positives = 66/271 (24%), Gaps = 19/271 (7%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET--KTEDKNFP----FETLQS 52
           + + T N +S +      +I  LA  I+E + D+I LQE     + +N       +    
Sbjct: 1   MKLLTLNCHSWQEENQIEKIKYLAKAIQEEDYDVIALQEVSQSIQAENVCGNKKKDNFGL 60

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           L              +     +   ++                +  F    +        
Sbjct: 61  LLLEELRALNVKEYNIIWDFSHIGYDVYEEGLAIITKHNIVKEDTLFVSENKDTTYWKTR 120

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                 I     +              +    ++        N         +       
Sbjct: 121 KIVSATIAYNDKNITFYSCHLGWWNDEEESFKDQVDRLMERVNSNELSFLMGDFNNNARL 180

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                E                           + WD         + +RID I+ +   
Sbjct: 181 EGEGYEYMMQKGLYDTYELAIEKDEGTTVQGEIAGWD------ENKQNLRIDLILSNQS- 233

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              ++S+++          SDH  V V LDI
Sbjct: 234 -KTVNSSKVIFNGTNRNVISDHFGVEVQLDI 263


>gi|163787900|ref|ZP_02182346.1| endonuclease/exonuclease/phosphatase family protein
           [Flavobacteriales bacterium ALC-1]
 gi|159876220|gb|EDP70278.1| endonuclease/exonuclease/phosphatase family protein
           [Flavobacteriales bacterium ALC-1]
          Length = 340

 Score = 51.3 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/265 (14%), Positives = 77/265 (29%), Gaps = 42/265 (15%)

Query: 4   VTVATWNVNSIR-----------ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52
           ++V ++NV   R               ++  +I +  P+I+CLQE + +D   P      
Sbjct: 100 ISVMSYNV---RLFNIYSWLPSETVKKDIIEFIHKEKPEILCLQEYRKDD---PIVLDNY 153

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
            N++           V          I+     +  +     I         T+R+ NL+
Sbjct: 154 YNFNASHKDTVKRGQVVFS----KFPIINSGSLEFPNTFNNGIFVDIVKQKDTIRVYNLH 209

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
           L      T  +     +    F +  S     +E +               +        
Sbjct: 210 LQSSGIQTDVEALKNETSDNLFKQVGSTFKLQQEQVEL----------FLKHKSKCNYKT 259

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                    ++  +      + +  T +         Y    +     +RID I+   + 
Sbjct: 260 IVTGDFNNTAYSYIYKEIKGNNLVDTFEEAGNGFGKTYDFKFFP----MRIDFILADKDF 315

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPV 257
           T       ++       K SDH P+
Sbjct: 316 T-------VNGFKTYDVKLSDHYPI 333


>gi|56694220|gb|AAW22882.1| unknown [Solanum lycopersicum]
          Length = 190

 Score = 51.3 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 18/41 (43%), Gaps = 2/41 (4%)

Query: 3  VVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTE 41
           V + +WNV  +        +   I+    D+ C QETK +
Sbjct: 2  TVKIISWNVRGLNQANKRCVIKNLIQGWKADVYCFQETKIQ 42


>gi|326674296|ref|XP_003200110.1| PREDICTED: transposon TX1 uncharacterized 149 kDa protein-like
           [Danio rerio]
          Length = 1583

 Score = 51.3 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/262 (12%), Positives = 69/262 (26%), Gaps = 28/262 (10%)

Query: 1   MSVVTVATWNVNSIRARIH--NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           M V+ + + N+N  R       L   IK  N D++ +QET ++  N      +     + 
Sbjct: 287 MGVIRLGSLNLNGARDIKKRMQLYELIKHKNIDVMYVQETHSDCSNTIDWEKEWEGKVVL 346

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
           T    S  G AIL     + +   +                      +   N+Y P    
Sbjct: 347 THTSSSRGGGAILFAKHFLPVSYQIEEVIAGRLVII---KTEFEKYRINFINVYAPTNGT 403

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
                 +   + ++         L  +         +         +  +          
Sbjct: 404 ERVIFLNSINTLLQNCRTDDYVFLGGDFNCTENERLDRNHVEPHANSSRVLRELIET--- 460

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLH 237
                         D  R  +     Y++      +      + R+D         +++ 
Sbjct: 461 ----------HSLCDIWREFNGNVKQYTW----LHTRENFISMARLDRFYCFKHHVNVVR 506

Query: 238 SARIDTKPRGWTKPSDHTPVIV 259
              I          +DH+ V+ 
Sbjct: 507 KCEIVP-----VGFTDHSLVLC 523


>gi|319761678|ref|YP_004125615.1| endonuclease/exonuclease/phosphatase [Alicycliphilus denitrificans
           BC]
 gi|330823549|ref|YP_004386852.1| endonuclease/exonuclease/phosphatase [Alicycliphilus denitrificans
           K601]
 gi|317116239|gb|ADU98727.1| Endonuclease/exonuclease/phosphatase [Alicycliphilus denitrificans
           BC]
 gi|329308921|gb|AEB83336.1| Endonuclease/exonuclease/phosphatase [Alicycliphilus denitrificans
           K601]
          Length = 253

 Score = 51.3 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/269 (12%), Positives = 70/269 (26%), Gaps = 36/269 (13%)

Query: 3   VVTVATWNVN----SI----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           ++ VAT+N++     +    R  IHNL   +++ + DI+CLQE +               
Sbjct: 13  ILRVATYNIHKGVQGLGPARRLEIHNLGLAVEQLDADIVCLQEVR--------------- 57

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
                                P        G     +              L    +   
Sbjct: 58  -----KMNHKEAAYFKRWPRVPQAEYLAPEGYAAVYRTNAYTRHGEHGNALLTRWPVVGH 112

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
               I+  +++ +                +   L       +                  
Sbjct: 113 QHEDISDHRFEQRGLLHVEVEVQGRCVHAIVVHLGLIPGSRVRQVERLQRFIAREVPAGA 172

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             +           +    A    ++       + Y A    +   +++DH+ +    T 
Sbjct: 173 PLVVAGDFNDWGLQIKHMLAGFGLYEYDDAPQAFTYPA----RLPLVQLDHVYV-RGLTP 227

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           L        + R W + SDH P+I    +
Sbjct: 228 LGLQV---PRGRIWWRMSDHLPLIAEFRL 253


>gi|218679478|ref|ZP_03527375.1| putative phosphatase protein [Rhizobium etli CIAT 894]
          Length = 162

 Score = 51.3 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 8/61 (13%)

Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
               YS+ +    S      + +D+  +S      L SARIDT+  G    SDH P+ V 
Sbjct: 108 RPDSYSWMNPEDHSER----MHLDYCFVSCGLKDRLKSARIDTQSVG----SDHFPLWVE 159

Query: 261 L 261
           +
Sbjct: 160 I 160


>gi|332043524|gb|EGI79720.1| Endonuclease/exonuclease/phosphatase [Lacinutrix algicola 5H-3-7-4]
          Length = 339

 Score = 51.3 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 42/268 (15%), Positives = 75/268 (27%), Gaps = 46/268 (17%)

Query: 4   VTVATWNVNSIRARIHNLAAWI-------------KENNPDIICLQETKTEDKNFPFETL 50
           +++  +NV     R+ NL  WI             KE +PDI+ LQE        P ET+
Sbjct: 100 LSIMNFNV-----RLFNLYKWIPEDNIENKLVEFVKEESPDILALQEYH------PRETV 148

Query: 51  QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
               Y  +             + +    IV        +     I A       T+R+ N
Sbjct: 149 DFSFYKYKYEKLSGKKVKLGQAIFSKYPIVNSGSIAFPNTANNAIFADVVKGNDTVRVYN 208

Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170
           ++L      T  +        K F          +                  +      
Sbjct: 209 IHLQSLRIDTRVEQLTTQDSEKLFDGVGQTFKMQQFQTEL----------FLLHKRQCKY 258

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230
                      +   +      D +       + +    Y    +     +RID I+  P
Sbjct: 259 KMIVSGDFNNTALSYVYKEIKGDLVDTFKAAGNGF-GRTYNFKFFP----MRIDFILTHP 313

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVI 258
           +         I++      + SDH P++
Sbjct: 314 DFK-------INSFKTYDVEFSDHYPIM 334


>gi|68062911|ref|XP_673465.1| hypothetical protein [Plasmodium berghei strain ANKA]
 gi|56491335|emb|CAI03862.1| hypothetical protein PB405793.00.0 [Plasmodium berghei]
          Length = 119

 Score = 51.3 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 2/40 (5%)

Query: 7  ATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKN 44
           + N+N + + I    L  W+ + +P   CLQET   +K+
Sbjct: 1  MSLNINGLNSPIKRHRLTDWLHKQDPTFCCLQETHLREKD 40


>gi|327312703|ref|YP_004328140.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           denticola F0289]
 gi|326944135|gb|AEA20020.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           denticola F0289]
          Length = 366

 Score = 51.3 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/266 (14%), Positives = 84/266 (31%), Gaps = 22/266 (8%)

Query: 4   VTVATWNVN--SIRARIHN----LAAWIKENNPDIICLQETKT----EDKNFPFETLQSL 53
           + V ++NV   SI +        +  +I ++  DI+CLQE +      D+ +P       
Sbjct: 101 IKVLSYNVFMFSIWSEPGGEQNPIVDYILKSKADIVCLQEAQASMEGTDRIYPALKKHYP 160

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
            + +    +   + + +LS+Y  +   +   G + +    ++            +     
Sbjct: 161 YFRLMVKKKPGADHMVLLSRYPVLWQDSIPYGSNSNQSVAYMVDIKGTK----TLVVNNH 216

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
              N +++   ++  + +K  +     + E    L   G  ++   P             
Sbjct: 217 LESNGLSTDDKEEFKTLVKGNMGTGEAKDESFHLLRKLGSVSVRRAPQAEAVARYVRKYL 276

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI--RIDHIMLSPE 231
              + V        +           +    Y              G+  RIDHI  S +
Sbjct: 277 DRKVPVILCGDFNDSPLSYTHRTIARELTDCYVASGNGPGISYHKSGMYFRIDHIFCSDD 336

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPV 257
                  A++D         SDH P+
Sbjct: 337 FEPY--GAKVDNSVT----ASDHYPI 356


>gi|154492338|ref|ZP_02031964.1| hypothetical protein PARMER_01972 [Parabacteroides merdae ATCC
           43184]
 gi|154087563|gb|EDN86608.1| hypothetical protein PARMER_01972 [Parabacteroides merdae ATCC
           43184]
          Length = 353

 Score = 51.3 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/235 (15%), Positives = 64/235 (27%), Gaps = 18/235 (7%)

Query: 22  AAWIKENNPDIICLQETKTE-DKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80
           AA+IK+  PDIIC QE     D  +  ++++    ++              + Y    I 
Sbjct: 124 AAYIKQLQPDIICFQE--APGDGYYHRDSIRYAFDYVLYKYISRRTDHLPTTIYSRYPIH 181

Query: 81  THLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQ 140
           +       +     + A   IN Q +R+ N +    +                    A +
Sbjct: 182 SVKALYYKNSSNMSLIADVRINNQYIRVINNHFETTSVNAYRGIITAPGKSLEVRAKAVK 241

Query: 141 RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT-DAIRATH 199
            L L+    +          H       +    C       +      +           
Sbjct: 242 DLILKMKNNYLKRAEQADSIHAEIERSPYPVLVCGDFNDTPASYTYHQLRKGLTDGFRDC 301

Query: 200 DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDH 254
            + + Y+F           K  RID++  S               P      SDH
Sbjct: 302 GSGYQYTF-------RQLYKLWRIDYVFYSEFLKG--QDCFSPDAPY-----SDH 342


>gi|222478473|ref|YP_002564710.1| Endonuclease/exonuclease/phosphatase [Halorubrum lacusprofundi ATCC
           49239]
 gi|222451375|gb|ACM55640.1| Endonuclease/exonuclease/phosphatase [Halorubrum lacusprofundi ATCC
           49239]
          Length = 280

 Score = 51.3 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 44/292 (15%), Positives = 81/292 (27%), Gaps = 41/292 (14%)

Query: 1   MSVVTVATWNVNSIR------------ARIHNLAAWIKENNPDIICLQET---------- 38
           M+ + V ++NV   R             R   +   ++ + PD+   QE           
Sbjct: 1   MTAIRVLSYNV---RYANRDDHHDAWHDRRDAVGRLVRFHRPDVAAFQEPLPGQRRDLRE 57

Query: 39  KTEDKNF------PFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQA 92
           +  +  F        +  +S    + T   +  +         P E  T    D   +  
Sbjct: 58  RLSEYEFVGRGREADDEGESCPIAVRTDRWEVVDDDTFWLSETPSEPSTDWGADYPRIAT 117

Query: 93  RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG 152
                    +   L +   +                  +       +   +   P++  G
Sbjct: 118 WARVRAIDGDAALLVVNTHFDHVSAHARRESARLLCQRLPDVAGPDAGESDETIPVVLVG 177

Query: 153 DYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYA 212
           D+N           +  +  A                  T A         L        
Sbjct: 178 DFNCTSGSDPHRILVGDDPTAETDTAPIDDSGIALRDAATAADLRHGPETSL-------- 229

Query: 213 DSWSKNK-GIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             +++   G RIDH ++SPE  +   +   D   RG   PSDH PV+  L +
Sbjct: 230 TDFARLIDGRRIDHALVSPEVGAEAFATLTDRDDRGR-YPSDHLPVLARLAL 280


>gi|170703616|ref|ZP_02894358.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria
           IOP40-10]
 gi|170131473|gb|EDT00059.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria
           IOP40-10]
          Length = 286

 Score = 51.3 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 18/41 (43%), Gaps = 4/41 (9%)

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
           D + ++      +    ID   R     SDH PV++ L++ 
Sbjct: 250 DFVFVTDTLLPRVTRCEIDGDVR----ASDHQPVVLELEVS 286


>gi|254252251|ref|ZP_04945569.1| Metal-dependent hydrolase [Burkholderia dolosa AUO158]
 gi|124894860|gb|EAY68740.1| Metal-dependent hydrolase [Burkholderia dolosa AUO158]
          Length = 290

 Score = 51.3 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 18/39 (46%), Gaps = 4/39 (10%)

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
           D + ++    S +    ID   R     SDH P+++ LD
Sbjct: 256 DFVFVTDTLLSRVKRCEIDGDVR----ASDHQPIVLELD 290


>gi|225448944|ref|XP_002272707.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 1082

 Score = 51.3 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/263 (13%), Positives = 80/263 (30%), Gaps = 38/263 (14%)

Query: 4   VTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           + +  WNV  +     R  I  +   ++    D++CL ETK +D                
Sbjct: 3   IKILCWNVRGLHDCDKRKLIKGV---VRNQKADLVCLLETKVKD---------------V 44

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA-TFTINTQTLRIGNLYLPHGN 117
           +    +  GV     +  ++      G  L    R +E         ++ +       G 
Sbjct: 45  STQLVNSVGVGRFLNWASVDARGTAGGLLLIWDNRVLENLEVESGGYSISVRFRNCSDG- 103

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
                 +    S +   +  + +    EE     G +         +N + +  +     
Sbjct: 104 ------FSWVFSGVYGPVIGSEKEDFWEELGAIRGLWEDPWCIGGDFNAVRYPEERRNAP 157

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
            +    ++   +     +R        +++        +     R+D  ++S +      
Sbjct: 158 RLTADMRRFSEVIGELGLRDIPLAGGPFTW----IGGLNSQAASRLDRFLISDQWEDHFS 213

Query: 238 SARIDTKPRGWTKPSDHTPVIVS 260
           +      PR     SDH+P+I+ 
Sbjct: 214 AISQSALPR---LVSDHSPIILE 233


>gi|24214114|ref|NP_711595.1| hypothetical protein LA_1413 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|24195001|gb|AAN48613.1| hypothetical protein LA_1413 [Leptospira interrogans serovar Lai
           str. 56601]
          Length = 360

 Score = 51.3 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 78/265 (29%), Gaps = 31/265 (11%)

Query: 18  IHNLAAWIKENNPDIICLQETKTEDKN-FPFETLQSLNYHIETCGQKSYNGVAILSKYQP 76
           +  +A +I   +PD+I  QE     +N F  + L+ +   I +            S + P
Sbjct: 92  LKKVADYIHSEDPDVILFQELHDGAENTFREDQLERILSRIGSEYVCRSEAFYWKSNFVP 151

Query: 77  IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
              +    G  L   +++  +    ++  L   +      N   +   +D          
Sbjct: 152 HPKILGSVGMKLATISKYKISDGIRHSLPLMPADPISTQFNLKRAILQNDLPIEGGDKFT 211

Query: 137 FASQRLE-------------------------LEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
             +  L+                              +  GD+N+IP   D  +      
Sbjct: 212 VLNTHLDAFSQGTDTMHRQVETITGLLKELDLAGHYWVLGGDFNLIPPGFDRKSMHPNGA 271

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
                 +  +      N      I    +    Y+++         ++   ID+I  S  
Sbjct: 272 FFYSDEQEIKPLFDRWNSAVPFKILNGPEKEKYYTYYPNDPAIGKPDRT--IDYIFYSSN 329

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTP 256
                   ++D K   WT  SDH P
Sbjct: 330 LKQ--SGYKVDQKDILWTI-SDHFP 351


>gi|325860217|ref|ZP_08173342.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           denticola CRIS 18C-A]
 gi|325482304|gb|EGC85312.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           denticola CRIS 18C-A]
          Length = 366

 Score = 51.3 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/266 (14%), Positives = 84/266 (31%), Gaps = 22/266 (8%)

Query: 4   VTVATWNVN--SIRARIHN----LAAWIKENNPDIICLQETKT----EDKNFPFETLQSL 53
           + V ++NV   SI +        +  +I ++  DI+CLQE +      D+ +P       
Sbjct: 101 IKVLSYNVFMFSIWSEPGGEQNPIVDYILKSKADIVCLQEAQASMEGTDRIYPALKKHYP 160

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
            + +    +   + + +LS+Y  +   +   G + +    ++            +     
Sbjct: 161 YFRLMVKKKPGADHMVLLSRYPVLWQDSIPYGSNSNQSVAYMVDIKGTK----TLVVNNH 216

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
              N +++   ++  + +K  +     + E    L   G  ++   P             
Sbjct: 217 LESNGLSTDDKEEFKTLVKGNMGTGEAKDESFHLLRKLGSVSVRRAPQAEAVARYVRKYL 276

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI--RIDHIMLSPE 231
              + V        +           +    Y              G+  RIDHI  S +
Sbjct: 277 DRKVPVILCGDFNDSPLSYTHRTIVRELTDCYVASGNGPGISYHKSGMYFRIDHIFCSDD 336

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPV 257
                  A++D         SDH P+
Sbjct: 337 FEPY--GAKVDNSVT----ASDHYPI 356


>gi|281344397|gb|EFB19981.1| hypothetical protein PANDA_021346 [Ailuropoda melanoleuca]
          Length = 112

 Score = 51.3 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 37/106 (34%), Gaps = 12/106 (11%)

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
             E R     L  +   D  R  H     YSF+     ++S     RIDH++      + 
Sbjct: 4   NKETRALNAILDELDLIDIYRTLHPRTKEYSFYSNAHGTFS-----RIDHVLGHKTGLNR 58

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
                I          SDH  + + L+     K  ++S +  ++ I
Sbjct: 59  YQKIEIIPCI-----FSDHNALKLELN--HKEKPGRNSNTWRLRTI 97


>gi|147767377|emb|CAN62439.1| hypothetical protein VITISV_044009 [Vitis vinifera]
          Length = 1290

 Score = 51.3 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/261 (12%), Positives = 74/261 (28%), Gaps = 30/261 (11%)

Query: 1   MSVVTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
              + + +WNV      ++   + A I+    D++C+ ETK +                 
Sbjct: 266 FMKLRLVSWNVRGANDSSKRKVIKAMIRSQRADLVCIPETKIQ----------------- 308

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
                   GV              +    L           ++    + +GN ++     
Sbjct: 309 ----TMTEGVVRSLGSXRFLDWGXMGAQGLXGGILVCXDKRSLELLEMEVGNFFISCRLK 364

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
                     + +        +    EE     G +         +N  + + D      
Sbjct: 365 NVEDGVVWIFTGVYGPCNRKEREELWEELGAIRGIWEEPWCLGGDFNVTLSQRDRSRQGS 424

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           +  + ++   +    A+        +YS+    +   S     R+D  ++S     +   
Sbjct: 425 LNGAMRRFAQVVDDLALIDLPLQGGVYSW----SGGRSNQTWARLDRFLVSQGWLDIFKG 480

Query: 239 ARIDTKPRGWTKPSDHTPVIV 259
           A     PR     SD  P+++
Sbjct: 481 AVQCRLPR---PTSDXFPILL 498


>gi|150397136|ref|YP_001327603.1| endonuclease/exonuclease/phosphatase [Sinorhizobium medicae WSM419]
 gi|150028651|gb|ABR60768.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium medicae WSM419]
          Length = 368

 Score = 51.3 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 45/308 (14%), Positives = 86/308 (27%), Gaps = 74/308 (24%)

Query: 25  IKENNPDIICLQETKTEDKNFPFETLQ--------SLNYHIETCGQKSYNGVAILSKYQP 76
           I + + DI+CLQE    D     +  +           Y  +   + +      ++    
Sbjct: 66  IADCDADILCLQE---ADNMAALQAFEYGYLFRMVGNGYRQKYLVEGNDTRGIDVAVMMR 122

Query: 77  IEIVTHLPGDDL-----------------------------DVQARFIEATFTINTQTLR 107
            E       + L                               +   +E    I  + L 
Sbjct: 123 EETRDGQKIECLEVKSHAALTYEDLDLFNDELALTNRPRDRIFKRDCLEVDVRIGGRPLT 182

Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELE----------EPLIFAGDYNII 157
           +  ++L    P        + +   R     + R  +E          +     GD N  
Sbjct: 183 LYVVHLKSMGPAREGLDGRQATMAVRRAEVKAVRHIIEGRFGSGDTADKIFAVCGDMNDY 242

Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK 217
            +  +         +     E   +   L + GF             ++ +        +
Sbjct: 243 QEKVNVLGDRRNGYEFVPYEETSSALDVLSHDGFVVNPMLRRPVLDRWTLFHSRGP--EE 300

Query: 218 NKGIRIDHIMLSPEATSL-------LHSA------------RIDTKPR-GWTKP--SDHT 255
               ++D+I LS E           +  A             ++  PR GW +P  SDH 
Sbjct: 301 RHLCQLDYIWLSQELARRNAARVPEVIRAGQPYRTIFPAGQEVERYPRTGWDRPKASDHC 360

Query: 256 PVIVSLDI 263
           PV+++LDI
Sbjct: 361 PVVMTLDI 368


>gi|88811277|ref|ZP_01126533.1| Endonuclease/exonuclease/phosphatase [Nitrococcus mobilis Nb-231]
 gi|88791816|gb|EAR22927.1| Endonuclease/exonuclease/phosphatase [Nitrococcus mobilis Nb-231]
          Length = 280

 Score = 51.3 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/96 (20%), Positives = 38/96 (39%), Gaps = 14/96 (14%)

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
                   ++    + ++              H+L+++  +      +N    IDHI++S
Sbjct: 193 CRHVIVMGDLNCLSRSVEFDYLDKHTDLCEPIHNLHTYPSWRPH---RN----IDHILVS 245

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           P     + SA     P      SDH PVI+ +++PE
Sbjct: 246 PTL--QVRSAEALNYPL-----SDHLPVIMEVELPE 274


>gi|154251594|ref|YP_001412418.1| endonuclease/exonuclease/phosphatase [Parvibaculum lavamentivorans
           DS-1]
 gi|154155544|gb|ABS62761.1| Endonuclease/exonuclease/phosphatase [Parvibaculum lavamentivorans
           DS-1]
          Length = 231

 Score = 51.3 bits (121), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/269 (13%), Positives = 73/269 (27%), Gaps = 54/269 (20%)

Query: 4   VTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQETKTE---DKNFPFETL-QSLN 54
           + V +WN++       R  +  +   ++ ++PDI+  QE  +    D   P   L ++L 
Sbjct: 6   LRVLSWNIHGGVGRDGRFDLARIVRLVERHDPDIVAFQEVDSRGRLDGGAPLSILKEALG 65

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
            H       S                         V +RF  +   +   + R       
Sbjct: 66  EHAAEGRTISAPD----------------GHYGHAVISRFPLSGTRVCDLSFRSREPRCA 109

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
               I +     ++      L    +RL+    +  A +  +                  
Sbjct: 110 ISANIETPWGPLRLVTTHLGLSIWERRLQSSMLVDLAREEKLPC--------------IM 155

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
                               + +        S W +          +R+D I     A  
Sbjct: 156 MGDFNDWFSFGWVRRRLRAVLPSRTMEQTFPSAWPF----------LRLDRIYCGGAAA- 204

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            +  +  D    G    SDH P+I  + +
Sbjct: 205 -IVKSWTDE---GAAPISDHLPIIADISL 229


>gi|154149223|ref|YP_001406798.1| putative endonuclease/exonuclease/phosphatase [Campylobacter
           hominis ATCC BAA-381]
 gi|153805232|gb|ABS52239.1| putative endonuclease/exonuclease/phosphatase [Campylobacter
           hominis ATCC BAA-381]
          Length = 437

 Score = 51.3 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/293 (13%), Positives = 76/293 (25%), Gaps = 77/293 (26%)

Query: 2   SVVTVATWNV-----------------NS-IRA-----RIHNLAAWIKENNPDIICLQET 38
           S + +AT+NV                 N    A     ++      +K  + DI+ LQE 
Sbjct: 17  SELKIATYNVENLFDAKVQGSEYNDFKNGNWNAEKYSFKLEKTVDVLKRLDADIVALQEI 76

Query: 39  KTEDKNFP--FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV--THLPGDDLDVQARF 94
               +NF    +  Q   Y      +   N    ++    I+I      P          
Sbjct: 77  ----ENFEVLKDLAQKSGYKFYKFSKSDKNSPFGVAVLSRIKIKDTIFYPPPLNIKSRDI 132

Query: 95  IEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDY 154
           +   FT   +   I   +        S +  +            +  +  +    +  D 
Sbjct: 133 LRCDFTFEGENFSIFVNHFLAKKNAYSKRIANATQLSSVLRNVKNVVVLGDFNTNYGSD- 191

Query: 155 NIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADS 214
             +         ++       ++E                                    
Sbjct: 192 -SLLNDIINRYNLVDLWKFLPSIERISHQ------------------------------- 219

Query: 215 WSKNKGIRIDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSL 261
                G  IDHI+LS +    +       S  +  +     K SDH P+  ++
Sbjct: 220 ----SGRAIDHILLSQDFFKNVTLNYKDESFGVFDE---NFKNSDHLPIFFTI 265


>gi|121593299|ref|YP_985195.1| endonuclease/exonuclease/phosphatase [Acidovorax sp. JS42]
 gi|222110021|ref|YP_002552285.1| endonuclease/exonuclease/phosphatase [Acidovorax ebreus TPSY]
 gi|120605379|gb|ABM41119.1| Endonuclease/exonuclease/phosphatase [Acidovorax sp. JS42]
 gi|221729465|gb|ACM32285.1| Endonuclease/exonuclease/phosphatase [Acidovorax ebreus TPSY]
          Length = 255

 Score = 51.3 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/272 (13%), Positives = 81/272 (29%), Gaps = 42/272 (15%)

Query: 3   VVTVATWNVN----SI----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           ++ VAT+N++     +    R  IHNL   +++ + DI+CLQE +               
Sbjct: 15  ILRVATYNIHKGVQGLGPARRLEIHNLGLAVEQLDADIVCLQEVR--------------- 59

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
                   +          + P        G +   +              L    +   
Sbjct: 60  -----RMNRKEASYFERWPHVPQAEYLAPEGYEAIYRTNAFTRHGEHGNALLTRWPVIGH 114

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
               I+  +++       R L      ++            ++P         +    A 
Sbjct: 115 QHEDISDHRFEQ------RGLLHVEVEIQGRRVHAIVVHLGLVPGSRIRQVAQLQRFIAR 168

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW---SKNKGIRIDHIMLSPE 231
              E            +   I+       L+ + D    ++   ++   +++DH+ +   
Sbjct: 169 EVPEDAPLVVAGDFNDWGLQIKRMLAGFGLFEY-DDAPQAFTYPARLPMVQLDHVYV-RG 226

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            T L        + R W + SDH P+I    +
Sbjct: 227 LTPLGLQV---PRGRIWWRMSDHLPLIAEFKL 255


>gi|307944213|ref|ZP_07659554.1| putative endonuclease/exonuclease/phosphatase [Roseibium sp.
           TrichSKD4]
 gi|307772559|gb|EFO31779.1| putative endonuclease/exonuclease/phosphatase [Roseibium sp.
           TrichSKD4]
          Length = 342

 Score = 51.3 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/263 (14%), Positives = 81/263 (30%), Gaps = 32/263 (12%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQET--KTEDKNFPFE---TLQSLNYHIE 58
           + + + N+  +      L  ++   N DI+  QET    +D+    +    +  L  + E
Sbjct: 102 LKLISINLERLYLNDKTLTDYLVAQNADILLFQETFWWQQDRLLALDGLTEIAGLGPYPE 161

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
              +      +I SK+    +          ++    +       + + I ++  P G  
Sbjct: 162 HLVRGELGQTSIFSKFPITNVEY--------IEVPASDVRNLTGYREIVIVDIETPQG-- 211

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
                +    +  +   R+  ++  L+                   +P+I   D   +  
Sbjct: 212 -PIQLFAVHPNSPRSPTRWQERQNYLDLLTDAVRRRQQASD-----SPVIIMGDWNTSPW 265

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
               F  L   G   A          + F+DY         G  +DH+ +S +       
Sbjct: 266 SWHFFTLLDETGLNTAFPNGIPQTTRF-FYDYRLHWI---LGAIVDHVAVSDDF--QFTD 319

Query: 239 ARIDTKPRGWTKPSDHTPVIVSL 261
                   G    +DH P+ V L
Sbjct: 320 VS-----LGPDVGTDHLPLEVEL 337


>gi|332186411|ref|ZP_08388155.1| endonuclease/Exonuclease/phosphatase family protein [Sphingomonas
           sp. S17]
 gi|332013394|gb|EGI55455.1| endonuclease/Exonuclease/phosphatase family protein [Sphingomonas
           sp. S17]
          Length = 276

 Score = 51.3 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/270 (15%), Positives = 75/270 (27%), Gaps = 30/270 (11%)

Query: 3   VVTVATWNVNSIR-----------ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51
            + V T+NV   R           AR   +   I+   PD+I  QE     +        
Sbjct: 18  TLKVMTFNV---RYASDEGAERWAARRPVMVELIRRAVPDVIGTQE--LLQRQGDDIVRA 72

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
              Y          + +                   +D    ++  T  +        +L
Sbjct: 73  LPGYRWF-----GRDRMGGHDDEHMGIFYRPDRLTLVDQGDFWLSDTPEVVGSQSWGTDL 127

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
                  +  TK      ++      A +  + E     A              P+I   
Sbjct: 128 PRMASWAVFETKDAKPRRFLFVDTHLAHRDEDAEARDKAAALILARLPTLAKGLPVILAG 187

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
           D     +     +    +          +   + +F D     ++     RID++ L   
Sbjct: 188 DMNARPDTAAYRRFAGALTDCWLGAKRREGPEM-TFHD-----FTGTPDRRIDYLFLRGF 241

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
               + +   DT  RG T PSDH PV  +L
Sbjct: 242 RADAIAT---DTWHRGKTYPSDHFPVRATL 268


>gi|268561416|ref|XP_002646438.1| Hypothetical protein CBG18823 [Caenorhabditis briggsae]
          Length = 382

 Score = 51.3 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 46/299 (15%), Positives = 86/299 (28%), Gaps = 74/299 (24%)

Query: 4   VTVATWNVNSI--RA---RIHNLAAWIKEN-------------------------NPDII 33
           +++ +WN++ +  R+   R+  +A  +K+                          NPDI+
Sbjct: 114 LSLMSWNIDGLDGRSLATRMKAVATIVKKTPQNPIFRPKNRVLEIFQKIARMAQVNPDIL 173

Query: 34  CLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR 93
            LQE   +    P + LQSL     +     Y    ++SK   +E    +   +  +   
Sbjct: 174 FLQEV-VDRDLEPIDKLQSLYKIYYSNKGCQYYTAILVSKMFEVEKHDVVHFQNSGMYRT 232

Query: 94  FIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGD 153
                 +I    + + N +L   +                              L F GD
Sbjct: 233 LQIVEGSIGGMKVFLVNTHLE--SMRDHRAQRMAQFSFCMDRCAEIIANNPGCFLFFGGD 290

Query: 154 YNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD 213
            N+  +                          + +      + A  DT   +++  Y  D
Sbjct: 291 LNLRDEEIS----------------------SIPDGVLDAWVSAGCDTKTKWTWDTYKND 328

Query: 214 SWSKNKG--IRIDHIM---------LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           +     G  +R D I           S E    + S            PSDH  +  + 
Sbjct: 329 NKQGFNGAKMRFDRIYWHGPFNQVHFSLEGRQRIRSC--------LCFPSDHWAINATF 379


>gi|212550735|ref|YP_002309052.1| hypothetical protein CFPG_378 [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|212548973|dbj|BAG83641.1| conserved hypothetical protein [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 343

 Score = 51.3 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/238 (14%), Positives = 63/238 (26%), Gaps = 15/238 (6%)

Query: 21  LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80
           +  ++   N DIIC QE +  +K      +++               VA+ SKY  +   
Sbjct: 112 ILQYVANQNSDIICFQEFRLGNKQLTLSAVRN-TLRATPYFFLLPCRVAVFSKYPILSTK 170

Query: 81  THLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQ 140
               G   +                +          +      YD   +   R L   + 
Sbjct: 171 NIPFGSRYNGALIAELNINGRKVTLINCHLESNKILDSEKIDYYDLIQTLNVRKLGAFTY 230

Query: 141 RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHD 200
            +  +    F           +                              D   +  +
Sbjct: 231 MMFHKLTPAFKIRAMQSSIIAEIIRESKNPYTIICGDFNDTPISFTYRKIKGDLEDSFVE 290

Query: 201 THHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257
           +            S++ N  + RID+I  S    S   +A +     G  + SDH PV
Sbjct: 291 SGCG------MGISFNANYFLFRIDYIFHSKNMRSY--NAMV-----GKGEDSDHYPV 335


>gi|15965796|ref|NP_386149.1| hypothetical protein SMc04274 [Sinorhizobium meliloti 1021]
 gi|15075065|emb|CAC46622.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021]
          Length = 368

 Score = 51.3 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 46/309 (14%), Positives = 90/309 (29%), Gaps = 76/309 (24%)

Query: 25  IKENNPDIICLQETKTEDKNFPFETLQ--------SLNYHIETCGQKSYNGVAILSKYQP 76
           I + + DI+CLQE    D     +  +           Y  +   + + +    ++    
Sbjct: 66  IADCDADILCLQE---ADNMAALQAFEYGYLFRMAGNGYRQKYLVEGNDSRGIDVAVLMR 122

Query: 77  IEIVTHLPGDDL-----------------------------DVQARFIEATFTINTQTLR 107
            E       + L                               +   +E    I  + L 
Sbjct: 123 EETRDGQKIECLEVKSHAALTYEDLDLFNDELALTNRPRDRIFKRDCLEVDVRIGGRPLT 182

Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPL---IFAGDYNIIPQPHDCY 164
           +  ++L    P        + +   R     + R  +E        A     I    + Y
Sbjct: 183 LYVVHLKSMGPAREGLDGRQATMAVRIAEVKAVRHIIERRFGRGHTADKVFAISGDMNDY 242

Query: 165 N-------PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK 217
                         +     E   +   L + GF +           ++ +        +
Sbjct: 243 QEKVKVLGDRRNGYEFLPHEETTSALDVLSHDGFVENPNLRRPVLDRWTLFHSRG---PE 299

Query: 218 NKGI-RIDHIMLSPEATSL-------LHSA------------RIDTKPR-GWTKP--SDH 254
           ++ + ++D+I LSPE           +  A             ++  PR GW +P  SDH
Sbjct: 300 DRHLCQLDYIWLSPELARRNAARLPEIIRAGQPYRTIFPAGQEVERYPRTGWDRPKASDH 359

Query: 255 TPVIVSLDI 263
            PV+++LDI
Sbjct: 360 CPVVMTLDI 368


>gi|141475|sp|P14381|YTX2_XENLA RecName: Full=Transposon TX1 uncharacterized 149 kDa protein;
           AltName: Full=ORF 2
 gi|214846|gb|AAA49976.1| ORF2 [Xenopus laevis]
          Length = 1308

 Score = 51.3 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 49/259 (18%), Positives = 88/259 (33%), Gaps = 34/259 (13%)

Query: 1   MSVVTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           M+ ++++T N N  R   R+  + +++++    +  LQET T  +          ++++E
Sbjct: 1   MA-LSISTLNTNGCRNPFRMFQVLSFLRQGGYSVSFLQETHTTPEL-------EASWNLE 52

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
             G+  +N +   S                  Q   + AT  I  + L +          
Sbjct: 53  WKGRVFFNHLTWTSCGVVTL-------FSDSFQPEVLSATSVIPGRLLHLRVRESGRTYN 105

Query: 119 ITSTKYDDKISWIKRFLRFASQRLEL---EEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
           + +           RF    S  +E    +E LI  GD+N      D   P   ++    
Sbjct: 106 LMNVYAPTTGPERARFFESLSAYMETIDSDEALIIGGDFNYTLDARDRNVPKKRDSSESV 165

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
             E+   F         D  R  +     +++        S+    RID I +S    S 
Sbjct: 166 LRELIAHF------SLVDVWREQNPETVAFTYVRVRDGHVSQ---SRIDRIYISSHLMSR 216

Query: 236 LHSARIDTKPRGWTKPSDH 254
             S+ I   P      SDH
Sbjct: 217 AQSSTIRLAP-----FSDH 230


>gi|297199103|ref|ZP_06916500.1| endonuclease/exonuclease/phosphatase [Streptomyces sviceus ATCC
           29083]
 gi|197715179|gb|EDY59213.1| endonuclease/exonuclease/phosphatase [Streptomyces sviceus ATCC
           29083]
          Length = 238

 Score = 51.3 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/274 (13%), Positives = 70/274 (25%), Gaps = 47/274 (17%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           M +V V ++N+ S+R     LA  I+   PD++ +QE                       
Sbjct: 4   MVLVKVLSYNIRSMRDDTDALARVIQACEPDLVLIQE-------------------APRF 44

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            +       + S    + +          +               L +       G    
Sbjct: 45  FRWRKKLARLASTAGLVVLTGGGTAAGPAILCNLRVTVERTEDVLLPLIPGQHRRGFATA 104

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +       +        +    ++  +       +   H      +   D        
Sbjct: 105 VVRIGAARLGVLSCHLSLQKDERYDQAGMLLDRLAGMGVEHAVAGGDLN--DRPTGPAFS 162

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           +    LQ+   T        T    ++              RID I  +      +    
Sbjct: 163 RIADSLQDCWATS------PTGGEVTWT-------RTEPHRRIDAIFATKGIE--VRGCG 207

Query: 241 I--------DTKPRGWTKPSDHTPVIVSLDIPEP 266
           +        +T  R  T   DH PV+ +LDIP  
Sbjct: 208 VPLDLPGITETDLRAAT---DHLPVLATLDIPAS 238


>gi|150865047|ref|XP_001384099.2| RNA exonuclease NGL2 (Carbon catabolite repressor protein 4
           homolog) [Scheffersomyces stipitis CBS 6054]
 gi|149386303|gb|ABN66070.2| RNA exonuclease NGL2 (Carbon catabolite repressor protein 4
           homolog) [Scheffersomyces stipitis CBS 6054]
          Length = 463

 Score = 51.3 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 35/100 (35%), Gaps = 22/100 (22%)

Query: 4   VTVATWNV-------------NSIRARIH------NLAAWIKENNPDIICLQETKT-EDK 43
           V + ++N+             N   A +        L    K  N DI+CLQE    + K
Sbjct: 61  VKIMSYNILAQSLIRRTLFPTNG--AALKWPNRSKALLEEFKHYNADILCLQEVDVIQFK 118

Query: 44  NFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHL 83
           +F  +    L Y+ +     + N    +   + + I  + 
Sbjct: 119 SFWSKEFDKLGYNHKFYSCGTKNHGVAIVFRKDMFIFRYQ 158


>gi|114332258|ref|YP_748480.1| endonuclease/exonuclease/phosphatase [Nitrosomonas eutropha C91]
 gi|114309272|gb|ABI60515.1| Endonuclease/exonuclease/phosphatase [Nitrosomonas eutropha C91]
          Length = 253

 Score = 51.3 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/266 (14%), Positives = 69/266 (25%), Gaps = 27/266 (10%)

Query: 2   SVVTVATWNVN-SI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55
             + +AT+N++  +     R  +H L  +++  N DII LQE    +        Q    
Sbjct: 6   RTLHIATYNIHKGLSFFNQRVVLHELRDYLRSLNVDIIFLQEV-IGEHTLHASRFQDWPK 64

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
             +                  +    H     L            I+        L    
Sbjct: 65  DAQYEFLADAVWSDFAYGKNAVYNHGHHGNAILSRFPISSWENEDISAHRFESRGLLHCE 124

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
                       +  I   L    +    +   I      ++P                F
Sbjct: 125 LAIPGWKD---ALHCICVHLGLFKRGRYRQLEAIERRIRQLVPPDAPLVLA------GDF 175

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
                 + Q L +      +          SF             +R+D I +       
Sbjct: 176 NDWRGVANQALASRLNLVEVFQYTQGKAARSFPSVLPL-------LRLDRIYIRGF---Q 225

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
           + +ARI    R W++ SDH  +   +
Sbjct: 226 VKNARIFHN-RPWSRISDHAALSAQI 250


>gi|241766910|ref|ZP_04764717.1| Endonuclease/exonuclease/phosphatase [Acidovorax delafieldii 2AN]
 gi|241362633|gb|EER58476.1| Endonuclease/exonuclease/phosphatase [Acidovorax delafieldii 2AN]
          Length = 290

 Score = 51.3 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/301 (12%), Positives = 81/301 (26%), Gaps = 55/301 (18%)

Query: 4   VTVATWN------VNSIRARIHNLAAWIKENNPDIICLQETKTE---------DKNFPFE 48
           + + TWN      ++ + +    +       + D++CLQE                    
Sbjct: 1   MQLVTWNTQWCCGLDGVVSPQRIVQHARALADFDVLCLQEIAVHYPALEGNAGHDQVALL 60

Query: 49  TLQSLNYHIET---------CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF 99
                 Y +            GQ+   G  I ++   +++  H      D   R +    
Sbjct: 61  RALLPGYQVFFGAAVDEWTPDGQRQRFGNLIATRLPVLQLQHHPLPYPADAGVRSMPRMC 120

Query: 100 TINTQT------LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFAS-------------Q 140
           T+ T        +R+   +L   +          +  +       +             Q
Sbjct: 121 TVATVRDPGLGAVRVMTTHLEFYSKRQRMAQARALRVLHAQACAHAVAPPEASGDGSPFQ 180

Query: 141 RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHD 200
                   +  GD+N  P   +               +   +   ++       + A   
Sbjct: 181 SKAHTPHAVLCGDFNFEPHEPEHAAICAPAG----ADDSEGAPLGMRLWDSWRLLHAAAP 236

Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
               +  +D        +     D + +S      +    +D      T+ SDH PV VS
Sbjct: 237 QPPTFRLYDRRYGPEPGSC----DFVFVSDSLKGRVQRFVVD----AATQASDHQPVAVS 288

Query: 261 L 261
           +
Sbjct: 289 I 289


>gi|152993433|ref|YP_001359154.1| hypothetical protein SUN_1850 [Sulfurovum sp. NBC37-1]
 gi|151425294|dbj|BAF72797.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
          Length = 514

 Score = 51.3 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 48/298 (16%), Positives = 84/298 (28%), Gaps = 49/298 (16%)

Query: 18  IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ--------SLNYHIETCGQKSYNGVA 69
           + +    + + + DI+ LQE    +    F  LQ           Y   T  + +   VA
Sbjct: 57  LDHTTEVLCDLDADIVALQEI---ENESVFNALQKRLKRVGCPYRYSAITHKKGAPIQVA 113

Query: 70  ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKIS 129
           +LS++  ++    L           +E    ++   L I   +    +       + K  
Sbjct: 114 LLSRFP-LKKHRDLQVSFSPYVRNILEVEAEVDGYPLTIFANHWKSKSRKGV---ESKRI 169

Query: 130 WIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNM 189
              R L      +   +  I  GD N     +      + +      +          N 
Sbjct: 170 AYARTLEKRILSMPASKEYIILGDLNSNYDAYLTLPKKLNDTQGKTGI-NHILKTIDNNK 228

Query: 190 GFTDAIRATHDTHHLYSFW---DYYADSWSKNKGIR--IDHIMLSPEATS---------- 234
             + +          YS W    Y      +  G R  +DHI+L P              
Sbjct: 229 LISKSQIRKAPEGMHYSTWNELSYKERWSHRFYGHRSTLDHILLPPSMFDGKGIDYVNNS 288

Query: 235 -LL--------HSARIDTKPRGWTKP-----SDHTPVIVSLD----IPEPRKKQQDST 274
             +            I+       K      SDH PV    D    IP  +   + +T
Sbjct: 289 FRVFKTDRLFTSKGYINRWQIKNGKHTGRGYSDHLPVYAIFDTKPYIPSVKDMPEKAT 346


>gi|229131369|ref|ZP_04260269.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST196]
 gi|228652113|gb|EEL08050.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST196]
          Length = 263

 Score = 51.3 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/271 (12%), Positives = 66/271 (24%), Gaps = 19/271 (7%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET--KTEDKNFP----FETLQS 52
           + + T N +S +      +I  LA  I+E + D+I LQE     + +N       +    
Sbjct: 1   MKLLTLNCHSWQEENQIEKIKYLAKAIQEEDYDVIALQEVSQSIQAENVCGNKKKDNFGL 60

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           L              +     +   ++                +  F    +        
Sbjct: 61  LLLEELRALNVKEYNIIWDFSHIGYDVYEEGLAIITKHNIVKEDTFFVSENKDTTYWKTR 120

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                 I     +              +    ++        N         +       
Sbjct: 121 KIVSATIAYNDKNITFYSCHLGWWNDEEESFKDQVDRLMERVNSNELSFLMGDFNNNARL 180

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                E                           + WD         + +RID I+ +   
Sbjct: 181 EGEGYEYTMQKGLYDTYELAIEKDEGTTVQGEIAGWD------ENKQNLRIDLILSNRS- 233

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              ++S+++          SDH  V V LDI
Sbjct: 234 -KTVNSSKVIFNGTNRNVISDHFGVEVQLDI 263


>gi|147853994|emb|CAN83404.1| hypothetical protein VITISV_022676 [Vitis vinifera]
          Length = 709

 Score = 51.3 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 8/44 (18%)

Query: 4   VTVATWNVNSIRAR-----IHNLAAWIKENNPDIICLQETKTED 42
           + V +WN   IR          + A IK    D++CLQETK ++
Sbjct: 453 LRVLSWN---IREANDSEKRKVIKALIKGQKVDVVCLQETKMQE 493


>gi|329113454|ref|ZP_08242235.1| Endonuclease/Exonuclease/Phosphatase [Acetobacter pomorum DM001]
 gi|326697279|gb|EGE48939.1| Endonuclease/Exonuclease/Phosphatase [Acetobacter pomorum DM001]
          Length = 227

 Score = 50.9 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 47/129 (36%), Gaps = 11/129 (8%)

Query: 1   MSVVTVATWNVNSIR---ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57
           M  V + +WN+  +R   A +H++AA I+   PD++ +QE   E    P        ++ 
Sbjct: 25  MEGVRIISWNL--LRRTGATVHDIAALIEAEKPDVLLMQEATIEIDVLPDVIG---GHYA 79

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
                   +GVA  S+                    F      I  +   + N++L HG 
Sbjct: 80  RNPQPGRIHGVACWSRIPFARAPRACTI---PSGPLFKRHAQIIEYENFSLANVHLSHGQ 136

Query: 118 PITSTKYDD 126
            +   +   
Sbjct: 137 MLNRKQLRR 145


>gi|56757079|gb|AAW26711.1| SJCHGC01233 protein [Schistosoma japonicum]
          Length = 399

 Score = 50.9 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/279 (14%), Positives = 83/279 (29%), Gaps = 34/279 (12%)

Query: 1   MSVVTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55
           + +  V +WN+N +       R+ ++   IK+    ++CLQE          E L+S  Y
Sbjct: 118 LPIFNVLSWNINGLESANLNKRMSSVVQTIKKEEFHVVCLQEVIVSCLKILREQLES-TY 176

Query: 56  HIETCGQKSYNG----VAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
           HI +    + +     V ++ K+  I + T          +       +++    +    
Sbjct: 177 HIFSASDHNSSWDYFVVILVKKHPDIVVDTDTVSIQPFPNSVMNRHLLSVDLSLSQSFRQ 236

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
                N    T + +  +          + +                   +  + +  + 
Sbjct: 237 SNVELNLRMFTTHLESCAEYSAVRSAQLKSVWDTMSYYVNSGQFRAGSQGNRASILCGDL 296

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYA--DSWSKNKGI-------R 222
           +   +                +      +  +    WD     ++    KG+       R
Sbjct: 297 NLRDSEVSMLGGLPYGIQDVWNECGRRVEIRNT---WDPMHNPNARRLFKGVPRAHMTFR 353

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTK-------PSDH 254
            D + +     S L    ID   RG  K       PSDH
Sbjct: 354 YDRMYV---LGSRLK--PIDFGLRGIEKIKDLSCLPSDH 387


>gi|326430099|gb|EGD75669.1| hypothetical protein PTSG_07788 [Salpingoeca sp. ATCC 50818]
          Length = 709

 Score = 50.9 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/288 (10%), Positives = 71/288 (24%), Gaps = 36/288 (12%)

Query: 4   VTVATWNVNS-------IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56
           + + +WN+N        +  R+  +   +   + D++ LQE + ++       ++ + + 
Sbjct: 434 LRLVSWNINGFTPHDELLPGRLAKMQEELSGLDADVVLLQEAERQNLQLLHTLMEEIGF- 492

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                        +     P+  ++          A F+  +        R+       G
Sbjct: 493 -------------VPCDAPPLATLSPKHCVPEHFTATFMRESRFELLAQERMPFQSSQRG 539

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
             + +       +  K ++                  +         +   +   D    
Sbjct: 540 RDLNTCILRCTATGNKVWVGNVHFESMGTASEARCEQFAESLVEMSQHEHSVLAGDTNLR 599

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-------HHLYSF-WDYYADSWSKNKGI------R 222
            E         N       R+              Y F WD   +              R
Sbjct: 600 DEEGDDGCSAFNKQMLPGSRSIVQDAWELSGSPRQYRFTWDTLLNDRVDTTSWGGRPRAR 659

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKP-SDHTPVIVSLDIPEPRKK 269
            D   +     S          P       SDH  + V L   + + +
Sbjct: 660 FDRCFVKGLTASDFRLIGTHKSPDVLVGLVSDHFGICVDLHWAKGKAE 707



 Score = 47.1 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/284 (12%), Positives = 76/284 (26%), Gaps = 41/284 (14%)

Query: 4   VTVATWNVN----SIRARIHNLAAWIKEN----NPDIICLQETKTEDKNFPF--ETLQSL 53
           + V +WN+N    S R R+      ++        D++ LQE    ++      + +Q  
Sbjct: 79  LRVLSWNINAPSKS-RQRLPKDYDTLQGQVTTLRSDVVMLQEV--VERQLADLVKVMQDA 135

Query: 54  NYHIETCGQKSYNGVAIL----SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
            +         Y+G +I       +    +           +A F  +    +  T  + 
Sbjct: 136 GFSRCGGVPLVYSGDSIAPSVPPHFTLTFVRKKRLQLVAHKRAPFTNSRKARDLNTCTVR 195

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
                    + +   +    +  R      Q L+            +           + 
Sbjct: 196 CKRTGKEVWLGNVHLETYRKYAGRRCLQFLQSLQ-----------ALSRHDLGILAGDMN 244

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATH-DTHHLYSF-------WDYYADSWSKNKGI 221
             +A     ++Q           DA           +++       W +    +  N  I
Sbjct: 245 LREAEAQRVLQQCRGAAPYTSIGDAWEMVGSPKEQEFTWDLQLNTSWSH----FPNNPRI 300

Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           R D   +     +             +   SDH  +   L +P 
Sbjct: 301 RFDRCYV-KGLRARSFELVGTRALTHFGHFSDHFGICTHLQLPS 343


>gi|254495120|ref|ZP_05108044.1| endonuclease/exonuclease/phosphatase family protein [Polaribacter
           sp. MED152]
 gi|85819470|gb|EAQ40627.1| endonuclease/exonuclease/phosphatase family protein [Polaribacter
           sp. MED152]
          Length = 325

 Score = 50.9 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 47/286 (16%), Positives = 89/286 (31%), Gaps = 37/286 (12%)

Query: 2   SVVTVATWNV--------N-------SI-RARIHNLAAWIKENNPDIICLQETKTEDKNF 45
           SV ++AT+N+        N       S+ +A +  +    +  NPDII  QE    D N 
Sbjct: 52  SVFSIATYNIGYLSGMTNNRPVPKPKSLFKANLQKVKKETQAVNPDIIAFQEI---DYNA 108

Query: 46  -------PFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT 98
                    E + SL Y+       S   V     Y P             +  + I + 
Sbjct: 109 SRSYHINQEEEVASLGYNY------SARTVNWDENYLPFPYWPISMHFGKVISGQSILSK 162

Query: 99  FTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP 158
           + +  Q   + +          +   +     +K  +      +       F        
Sbjct: 163 YPLANQERVVLSRVEDSPFYRDAFYLERLAQIVKANINGKEIVIINIHLEAFDKPTRAKQ 222

Query: 159 QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-K 217
                     ++ND    L    + +               +  +    +D  A+++  K
Sbjct: 223 FQEVEAIFNKYKNDYPTLLLGDFNARARDKSSVVQTFFKDDNIGNAAFNYDAIANTFDTK 282

Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +   RID+I  + E    + S R+  +     + SDH PV +   +
Sbjct: 283 DPYERIDYIFYTKETIEYV-SGRVLNEY---EQASDHLPVFMKFKL 324


>gi|224085215|ref|XP_002196659.1| PREDICTED: hypothetical protein [Taeniopygia guttata]
          Length = 390

 Score = 50.9 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/261 (11%), Positives = 72/261 (27%), Gaps = 27/261 (10%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDK--NFPFETLQSLNYHIETCGQKSYNGVAILSKY 74
           R+  +   ++    D++ LQE  +E    +   +      +          +G+ + S++
Sbjct: 29  RVRLIGDTLRHEGFDLVLLQEVWSEQDYSDLKVKLAGCYPFSHYFRSGVIGSGLCVFSRF 88

Query: 75  QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRF 134
             ++ + +    +              +       +L+  +      +    ++      
Sbjct: 89  PILDTLLYQYSLNGY-------PYMLQHGDWFCGKSLHAEYCRDKD-SYLPHRLVQAWEL 140

Query: 135 LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDA 194
            +F     +  + ++  GD N+ P+         W        E                
Sbjct: 141 AQFIRHTSKAADVVLLGGDLNMHPEDVGIRLLRGWTGLRDAFAEAAHFEGCKNGCTLIPD 200

Query: 195 IRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT----- 249
                 +  L               GIRID+I+     +S            G       
Sbjct: 201 NCFAAKSELL-----------PFPLGIRIDYILY-KAISSFTVKCAELKTTMGRAPGVDI 248

Query: 250 KPSDHTPVIVSLDIPEPRKKQ 270
             SDH  V+ +L I    +  
Sbjct: 249 PFSDHEAVMATLHIQRQGQPA 269


>gi|186475729|ref|YP_001857199.1| endonuclease/exonuclease/phosphatase [Burkholderia phymatum STM815]
 gi|184192188|gb|ACC70153.1| Endonuclease/exonuclease/phosphatase [Burkholderia phymatum STM815]
          Length = 287

 Score = 50.9 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 4/38 (10%)

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           D + ++ +  + L S  ID    G T+ SDH PVIV +
Sbjct: 253 DFVFVTEDLQARLQSCEID----GGTRASDHQPVIVEI 286



 Score = 38.6 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 8/42 (19%)

Query: 4  VTVATWNVNSIRARIHN---LAAWIKEN----NPDIICLQET 38
          + + +WNV   R+  H    L+  I E     + D++C+QE 
Sbjct: 1  MRLISWNVQWGRSA-HGDVSLSRTIDEARRLADFDVLCMQEV 41


>gi|71991697|ref|NP_493169.2| hypothetical protein T27F6.6 [Caenorhabditis elegans]
 gi|33302616|sp|O45870|NSMA_CAEEL RecName: Full=Putative neutral sphingomyelinase
 gi|31441797|emb|CAB04885.2| C. elegans protein T27F6.6, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 434

 Score = 50.9 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/283 (12%), Positives = 76/283 (26%), Gaps = 26/283 (9%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDK--NFPFETLQSLNYHIETCGQKSYNGVAILSKY 74
           R++ +  ++ +   DI+ LQE  +         +      Y        + +GV + S++
Sbjct: 63  RLNKIGQYMIDELYDIVGLQELWSYYDFVRLSEQVSSVYPYFHYFHSGFTGSGVCVFSRH 122

Query: 75  QPIEIVTHLPGDDLDVQARFIEATFTINTQTLR------------IGNLYLPHGNPITST 122
             +  +T+    +           F      L                      +     
Sbjct: 123 PIVSTLTNRYSLNGFAHHIHRGDWFGGKVVGLTEIEIDGDLRVNFYTTHLHAEYDRENDL 182

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN-----DACFTL 177
               + +      +F        + +I  GD N+ P        +              +
Sbjct: 183 YLPHRTAQAFELAQFVRHTARGADVVIVTGDLNMEPCDLGFRLILSHAKLFDAWRMSHEV 242

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML-SPEATSLL 236
           E   S  +L                + Y+         + +   RID+++  S      L
Sbjct: 243 ENEDSEGELLKFRGIAKGGTCDRPDNCYT----KRALKNVDDSKRIDYMLFKSGRCNVKL 298

Query: 237 HSARI-DTKPRGWT-KPSDHTPVIVSLDIPEPRKKQQDSTSQN 277
               I   +  G     SDH  +     I +  + ++   +  
Sbjct: 299 EECEITLNQIPGEDLNYSDHVGLRARFTIDDRFRHEKSVNTWE 341


>gi|326664779|ref|XP_003197883.1| PREDICTED: transposon TX1 uncharacterized 149 kDa protein-like,
           partial [Danio rerio]
          Length = 1144

 Score = 50.9 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/266 (13%), Positives = 84/266 (31%), Gaps = 37/266 (13%)

Query: 4   VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           +T +T NV S+++  R  ++ + +K    D++ +QE        PF T         T  
Sbjct: 6   ITFSTINVRSVKSIVRAQSILSLLKTFRSDVLLIQEC-----ALPFLTK-------YTKW 53

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           ++ +     +           +     +       +T   + + + +   +L     + +
Sbjct: 54  ERLWTQGPSIWSGSNFNKNDGVAVLINNPHILVKGSTVIRDGRAILVNLSFLDRDINVLN 113

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI--IPQPHDCYNPIIWENDACFTLEV 179
               +  +            +    P I AGD+N     +          +  +     +
Sbjct: 114 VYGFNDKNDRYELFEDFQPHMLGRVPFILAGDFNCVLTHKDRRRREDFKLDKTSVLMQAL 173

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
                 +++    D  R TH     ++++          +  RID++  S          
Sbjct: 174 ------VRDFKLVDCFRTTHQREEGFTWFSGDGT-----RASRIDYVF-SRNCPP----- 216

Query: 240 RIDTKPR-GWTKPSDHTPVIVSLDIP 264
              T  R      SDH  +  +L +P
Sbjct: 217 ---TDARLTPLFFSDHHMLSCTLSLP 239


>gi|149638074|ref|XP_001509853.1| PREDICTED: similar to CCR4 carbon catabolite repression 4-like
           [Ornithorhynchus anatinus]
          Length = 617

 Score = 50.9 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/279 (15%), Positives = 72/279 (25%), Gaps = 36/279 (12%)

Query: 21  LAAWIKENNPDIICLQETKTEDKNFPFE--TLQSLNYHIETCGQKSYNGVAILSKYQPIE 78
           +   I    PDI+CLQE    D  F      L  L Y      +         S    +E
Sbjct: 229 ILEEILGYQPDILCLQEV---DHFFDTFQPLLSRLGYRGTFFPKP-------WSPCLDVE 278

Query: 79  IVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFA 138
                 G  L       E   + N + + +           T    +    +        
Sbjct: 279 HNNGPDGCALFFLRDRFELVESTNIRLMALTLKTNQVAIAQTLRCQETGRLFCVAVTHLK 338

Query: 139 SQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN------MGFT 192
           ++            D             I       F  E  +   +             
Sbjct: 339 ARTGWERLRSAQGSDLLRNLCAITRGAEIPLIVCGDFNAEPTEEVYRHFATSSLNLNSAY 398

Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA-RIDTKPR----- 246
             + +   T   Y+ W   A   +++    +D+I  S  A   + SA  + T+ +     
Sbjct: 399 KLLSSDGQTEPPYTTWKVRASGEARHT---LDYIWYSQRAL-RVESALGLLTEEQIGPNR 454

Query: 247 --GWTKPSDHTPVIVSL------DIPEPRKKQQDSTSQN 277
                 PSDH  ++           PE   +  D  S  
Sbjct: 455 LPSLHYPSDHLSLVCDFGFREDPAPPEVPARTSDRGSPR 493


>gi|302543875|ref|ZP_07296217.1| endonuclease/exonuclease/phosphatase [Streptomyces hygroscopicus
           ATCC 53653]
 gi|302461493|gb|EFL24586.1| endonuclease/exonuclease/phosphatase [Streptomyces himastatinicus
           ATCC 53653]
          Length = 237

 Score = 50.9 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 46/132 (34%), Gaps = 9/132 (6%)

Query: 152 GDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYY 211
               ++    +   P        F       ++ L   G+ DA RA H     YS+    
Sbjct: 109 AGLGLVLGDFNVLEPEHRPTYRFFQPFEYGFYEWLGATGYRDAFRALHPDAAEYSWVGRT 168

Query: 212 ADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR-GWTKPSDHTPVIVSLDIPEPR--K 268
            D      G R DH   S    + L +     +PR G  + +DH+ + VSL +   R   
Sbjct: 169 GD------GYRYDHAHASARLAAELRACSYVHEPRTGTDRLTDHSALTVSLALHPARTLP 222

Query: 269 KQQDSTSQNMKP 280
               + +  + P
Sbjct: 223 VTDPTEAAELVP 234


>gi|251791412|ref|YP_003006133.1| Endonuclease/exonuclease/phosphatase [Dickeya zeae Ech1591]
 gi|247540033|gb|ACT08654.1| Endonuclease/exonuclease/phosphatase [Dickeya zeae Ech1591]
          Length = 380

 Score = 50.9 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/268 (14%), Positives = 78/268 (29%), Gaps = 39/268 (14%)

Query: 25  IKENNPDIICLQET------KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIE 78
           IK    DI+C  E       +  ++    +   +    I++        VA L++++  +
Sbjct: 122 IKALKADILCAVEVENMAVLRDFNQQILADHAFAQYVMIDSPNDPRGIDVACLTRHRITQ 181

Query: 79  IVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFA 138
           + TH+          F           + I        + + +          +   R A
Sbjct: 182 LRTHIFDASGSFTPLFSRDCLE-----VTIDVGLPQPVHVLCNHFKSQNGRNDEERERAA 236

Query: 139 SQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT 198
            +RL   E +        + Q +      + E+ A     +   F         D     
Sbjct: 237 KRRLAQAERVAEIVRGYNLQQEYVVVMGDLNEDAANPWHSLTPLFSIPDLHPVIDP---N 293

Query: 199 HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT--------------- 243
                 Y++  Y++    + +  ++D+I +S        +  I+                
Sbjct: 294 LPETARYTY--YFSGGKPQERLNQLDYIFISTPLHRAKVTCGIERRGIYNIDKIAAKEGA 351

Query: 244 -------KPRGWT-KPSDHTPVIVSLDI 263
                      W    SDH  V V LDI
Sbjct: 352 EPVTPFPTVTSWDTGASDHAAVWVELDI 379


>gi|84685512|ref|ZP_01013410.1| hypothetical protein 1099457000258_RB2654_11603 [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84666669|gb|EAQ13141.1| hypothetical protein RB2654_11603 [Rhodobacterales bacterium
           HTCC2654]
          Length = 266

 Score = 50.9 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/283 (9%), Positives = 62/283 (21%), Gaps = 42/283 (14%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS-LNYHIETCGQ 62
           + + + N         +L  ++++ +PD++CLQE        P + L      H+     
Sbjct: 1   MRIMSLNSWGGTLW-DSLLPYLRDESPDVLCLQEV-VHSPASPRDWLIYRDGDHVLDQRA 58

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT-----------LRIGNL 111
                V                G   D                                 
Sbjct: 59  NLLRDVTGALPDHVPLFCPAARGTLWDGDDPVPSFWGLATFVHRDLPIVGQVQGFVHKGF 118

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP----- 166
                     ++    +      L       ++      AG  +   +            
Sbjct: 119 EANGFGEHPRSRSGHAVRVWDDRLDRGVSIAQMHGLRDLAGKMDTPERAVQARRFLGLLR 178

Query: 167 --------IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN 218
                    +   D                          H T     +       ++  
Sbjct: 179 AVAEPGDATVLCGDFNVEPGSETLSYLADEGFDELVTGGGHPTTRTSHY--PKPGRFA-- 234

Query: 219 KGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
                D++++ P+          D +       SDH P++++L
Sbjct: 235 -----DYMLVGPDTRPAAFEVVRDPEV------SDHCPLVLTL 266


>gi|293375717|ref|ZP_06621989.1| endonuclease/exonuclease/phosphatase family protein [Turicibacter
           sanguinis PC909]
 gi|292645660|gb|EFF63698.1| endonuclease/exonuclease/phosphatase family protein [Turicibacter
           sanguinis PC909]
          Length = 254

 Score = 50.9 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/264 (12%), Positives = 77/264 (29%), Gaps = 27/264 (10%)

Query: 4   VTVATWNV-----NSIRARIHNLAAW---IKENNPDIICLQETKTEDKNFPFETLQSLNY 55
           + + T+N+     + +    + ++     IK   PD+I  QE     +    +  + L  
Sbjct: 5   LKIVTFNLRITVDDGLNVWENRVSHVVHKIKSEAPDLIGFQEL---TEISLRDLKRQLTD 61

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
           ++     +       +      +    L   D+   +       +     +      +  
Sbjct: 62  YVFVGCGRDEQMSGEMVMIAYNKNKLDLMSLDIFWFSDTPYKPGSKKEMMILARPCNVAV 121

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
                + +     +     ++ + +    E       D ++  Q       I+ + ++  
Sbjct: 122 FKNQLTNQIFRVYNTHYDHMQSSIRVQSSE---QLLNDLHLREQNISLPTLIMGDMNSEP 178

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
             E  ++    + +   D           Y+F DY      K     ID+I  +      
Sbjct: 179 QDEEIKAIVNNEIIELNDLTDKLD-----YTFHDY-GKIKIK-----IDYIFATKSV--N 225

Query: 236 LHSARIDTKPRGWTKPSDHTPVIV 259
              A            SDH PV+V
Sbjct: 226 ASKAVAWADCFDGVYLSDHYPVMV 249


>gi|218463453|ref|ZP_03503544.1| hypothetical protein RetlK5_30263 [Rhizobium etli Kim 5]
          Length = 183

 Score = 50.9 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 21/40 (52%), Gaps = 2/40 (5%)

Query: 4  VTVATWNVNSIRARIHNLAAWIKENNPDIICLQET-KTED 42
          + + + N    R     L  ++++++ D++CLQE  +  D
Sbjct: 1  MRIISLNAWGGRLH-EALIDYVRQSDADVLCLQEVLRAPD 39


>gi|149199705|ref|ZP_01876737.1| hypothetical protein LNTAR_25155 [Lentisphaera araneosa HTCC2155]
 gi|149137222|gb|EDM25643.1| hypothetical protein LNTAR_25155 [Lentisphaera araneosa HTCC2155]
          Length = 275

 Score = 50.9 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/262 (16%), Positives = 74/262 (28%), Gaps = 32/262 (12%)

Query: 3   VVTVATWNV-NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
            V VA++NV     A    +    K  N DII   E    D ++     + L       G
Sbjct: 31  TVRVASYNVEFGKSATPEQIGEMFKPYNLDIIGFDE--APDGDWTARVGKVLGMKYSFVG 88

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           + S             + +      +  V+                +  +    G  I  
Sbjct: 89  KISSAN-----HKDKYKTILSRTPLERKVEHDLSVDRRRCWNPASAVRAVTKIDGVAIAF 143

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
                  S   R     + +L  E       +  I+    +         DA      + 
Sbjct: 144 YSL-HICSTRDREKIGHAYKLVGEVLRKETTERVIVVGDFNN-----NIGDAAMNTFKKA 197

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS--KNKGIRIDHIMLSPEATSLLHSA 239
            F+               D    Y++     +++   KN G+ IDHI+    A + + + 
Sbjct: 198 GFKATWKDLK-------IDVSKEYTY-----NAFDPKKNLGV-IDHILCKTSAGAKVTAG 244

Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261
            I          SDH P+   +
Sbjct: 245 GI---IELKKPLSDHKPIWAEI 263


>gi|109073059|ref|XP_001090569.1| PREDICTED: sphingomyelin phosphodiesterase 2 [Macaca mulatta]
          Length = 423

 Score = 50.9 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/299 (13%), Positives = 90/299 (30%), Gaps = 37/299 (12%)

Query: 4   VTVATWNVNSI------RA-RIHNLAAWIKENNPDIICLQETKT-EDKNFPFETLQS-LN 54
           + +   N   I      RA R+  L  ++ + + D+  L+E  + +D  +  + L     
Sbjct: 9   LRIFNLNCWGIPYLSKHRADRMRRLGDFLNQESFDLALLEEVWSEQDFQYLRQKLSPTYP 68

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN---- 110
                      +G+ + SK+   E+  H+   +           F+     L + +    
Sbjct: 69  AAHHFRSGIIGSGLCVFSKHPIQELTQHVYTLNGYPYMIHHGDWFSGKAVGLLVLHLSGM 128

Query: 111 -------LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                        N         +++      +F     +  + ++  GD N+ P+   C
Sbjct: 129 VLNAYVTHLHAEYNRRKDIYLAHRVAQAWELAQFIHHTSKKADVVLLCGDLNMHPEDLGC 188

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223
                W       LE R      +           +                    G+RI
Sbjct: 189 CLLKEWTGLRDAYLETRDFKGSEEGNTMVPKNCYVNQQEL-----------KPFPFGVRI 237

Query: 224 DHIMLSPEATSLLHSARID-----TKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQN 277
           D+++     +    S +         P   T  SDH  ++ +L +     +Q  +++  
Sbjct: 238 DYMLY-KAVSGFYISCKSLETTTGNDPYSGTPLSDHEALMATLFVRHSPPQQSPNSTHR 295


>gi|71989539|ref|NP_001021585.1| EXOnuclease family member (exo-3) [Caenorhabditis elegans]
 gi|62553978|emb|CAI79211.1| C. elegans protein R09B3.1b, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 186

 Score = 50.9 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 46/107 (42%), Gaps = 10/107 (9%)

Query: 5   TVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH-----I 57
               WNV  +RA +        + E  PD++ L ETK ++  +P E  ++   +     +
Sbjct: 35  KFVCWNVAGLRACVKKSDFKEVLAEE-PDLVFLGETKCKE--WPPEMEETFKNYTKTLVV 91

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
            T     Y GV +LSK  P+++   +   + D   R I A F+    
Sbjct: 92  STEKNGGYAGVGLLSKCAPMKVHKGIGDPEFDTAGRLIIAEFSKFYF 138


>gi|284034261|ref|YP_003384192.1| endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836]
 gi|283813554|gb|ADB35393.1| Endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836]
          Length = 252

 Score = 50.9 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/276 (12%), Positives = 73/276 (26%), Gaps = 36/276 (13%)

Query: 1   MSV-VTVATWNV-NSIRARIHNLAAW-IKEN---------NPDIICLQETKTEDKNFPFE 48
           MS+ + VAT+N+ NS  +      +W ++           + +++ LQE        P +
Sbjct: 1   MSLQLRVATFNIRNS--SAQDGDNSWPVRREVAVAAIAALDAEVVGLQEV------LPDQ 52

Query: 49  TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108
                  + +     +     + +    + +V          + R++ A           
Sbjct: 53  LADLRTAYPDWTIVGAGRDDGVAAGEHSVVMVRPGDWSVESDETRWLSADPATPGSVGW- 111

Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168
                     +           +          L   E       +              
Sbjct: 112 DAELTRIATLVRLRHVSGVRVGVLNTHYDHVGELAQVESSRLLDRWAAAEPDRPW----- 166

Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
                       +       +                ++ D+   +     G RIDHI++
Sbjct: 167 ----VLLGDFNAEPGSPPLQVLTEAGWTDAIPAAAGGTWHDFTGAT----DGQRIDHILV 218

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
           S      +  A +         PSDH PV  +L +P
Sbjct: 219 SKPW--QVVEAAVSYHRPANRLPSDHWPVAATLHLP 252


>gi|154270051|ref|XP_001535895.1| hypothetical protein HCAG_09198 [Ajellomyces capsulatus NAm1]
 gi|150412984|gb|EDN08368.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 841

 Score = 50.9 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/254 (11%), Positives = 62/254 (24%), Gaps = 30/254 (11%)

Query: 27  ENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGD 86
           E+  D+I +QE             +S  +      +       +        +       
Sbjct: 11  EDKYDVIAVQEPSRNPHMLATHCPRSCGFWPAYHPETHP---RVCFLVNKRLVEHTWECH 67

Query: 87  DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEE 146
                   +  T  +    +       P G      +           +   ++ + L +
Sbjct: 68  YHSEYIAVLTITTDLGKVQIVNVYAPPPGGYSSEPEESPIGQLQEVAGMGTDAELVILGD 127

Query: 147 PLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYS 206
             +    +  +    +                              D +     T    +
Sbjct: 128 LNVHHERWGGVRVERNFRMAWQLI-------------------AQVDRLGLQLATPVGAT 168

Query: 207 FWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEP 266
            W           G  ID   LSP     L    I  +     K SDH P+  +L++   
Sbjct: 169 TWQDRGSP-----GTTIDLTFLSPLLHDKLRRCAIAEEA---CKGSDHKPIETTLELTPI 220

Query: 267 RKKQQDSTSQNMKP 280
            K+ +    +N +P
Sbjct: 221 PKEAERRNWKNAEP 234


>gi|148654035|ref|YP_001281128.1| endonuclease/exonuclease/phosphatase [Psychrobacter sp. PRwf-1]
 gi|148573119|gb|ABQ95178.1| Endonuclease/exonuclease/phosphatase [Psychrobacter sp. PRwf-1]
          Length = 251

 Score = 50.9 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/270 (14%), Positives = 83/270 (30%), Gaps = 31/270 (11%)

Query: 2   SVVTVATWNV-------NSIRARI-HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + +T+ T+N+       N  R  +   +   +K+ +PDI+CLQE + ++       L+ +
Sbjct: 5   NSITITTYNIHKGMSPLN--RQVVTKQIGMALKDLHPDILCLQEVQGQN-------LKRM 55

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
             + E   Q  +                +   ++       +          + I    L
Sbjct: 56  VKYNEYPNQSQHEWFGEYLNCAHSY-GKNCEYENGHHGNAVLSRHPLDPKHNVNITVNKL 114

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
                +               L      LE +    +      +    D   P+I   D 
Sbjct: 115 EQRGVLHCEVLPLGWPEPVVVLCAHLNLLENDRQKQYRAIAEYVNDTIDQSRPLILAGDF 174

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
               +V    +    +  T+A    H      ++        +K   + +D I +     
Sbjct: 175 NDWKKVSC-QRLAHELNMTEAFMQKHKKLLP-TYP-------AKLPVLSLDRIYV-RNL- 223

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             +  A +      W++ SDH P+   L +
Sbjct: 224 -KVKRAWVHKGK-PWSELSDHLPISAELSL 251


>gi|297569596|ref|YP_003690940.1| Endonuclease/exonuclease/phosphatase [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296925511|gb|ADH86321.1| Endonuclease/exonuclease/phosphatase [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 248

 Score = 50.9 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/276 (12%), Positives = 75/276 (27%), Gaps = 47/276 (17%)

Query: 4   VTVATWNVNSIRA-------RIHNLAAWIKENNPDIICLQET-----KTEDKNFPFETLQ 51
           + V ++N++  RA       R   +A  IK + PD++ LQE      ++ + +   E   
Sbjct: 3   LRVMSYNIH--RAIGVDRLFRPERIARIIKHHEPDLLLLQEVDVGVPRSRNLDLAEELAG 60

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
              Y       ++      L+K               +                     +
Sbjct: 61  LCGY-----PHRALGLNVALTKGHYGNATLSRFPIVAERNIDLTLPGHKARGCLYTALEI 115

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
              +G       ++     +   L F  +  ++   +       + P           + 
Sbjct: 116 PESNGKSRPLAVFN-----LHLGLSFNERPRQVGNLVKTPEFAALAPDDPCIVGGDFNDW 170

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
               +    +           +  ++ + T+  +S                +D I +   
Sbjct: 171 FTRLSPMFTEVMDFKCASSHQEDFQSPYLTYPSFS----PTGG--------LDKIFVRGP 218

Query: 232 ATSLLHSARIDTKPRGWTK----PSDHTPVIVSLDI 263
                    I  + R   +     SDH PV+  LD 
Sbjct: 219 FA-------IVKRQRCRMQISKIASDHLPVLADLDW 247


>gi|312891039|ref|ZP_07750563.1| Endonuclease/exonuclease/phosphatase [Mucilaginibacter paludis DSM
           18603]
 gi|311296506|gb|EFQ73651.1| Endonuclease/exonuclease/phosphatase [Mucilaginibacter paludis DSM
           18603]
          Length = 279

 Score = 50.9 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/244 (15%), Positives = 68/244 (27%), Gaps = 19/244 (7%)

Query: 23  AWIKENNPDIICLQE-TKTEDKNFPFETLQSLNYHIETCGQKSYNGVA-ILSKYQPIEIV 80
           A I+ +  DI   QE  K +  +      +   Y +     K     + I  K    +++
Sbjct: 52  ALIRFHQFDIFGTQEGLKNQLNDISNALPEYQRYGLGRDDGKDGGEHSAIFFKKYRFKLL 111

Query: 81  THLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQ 140
                   +   +            +      L   +      ++       +  R  S 
Sbjct: 112 KKGDFWLSETPDKPGLGWDATCCNRICSWVCLLDKVSKKKFYFFNAHFDHQGKIARQESA 171

Query: 141 RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHD 200
           +L L+     AG+   I           +  D     E         +    D       
Sbjct: 172 KLVLKMIKQIAGNEKAI-----------FTGDLNGDHESSWYQLLASSNYLVDTFA---Q 217

Query: 201 THHLYSFW-DYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
               Y+F   +       N    IDHI  +    + +    I T       PSDH PV+ 
Sbjct: 218 AKQPYTFNASFNGFGKELNGNGIIDHIFTTG--KADVKRWGILTDSYHGKYPSDHFPVLA 275

Query: 260 SLDI 263
            +++
Sbjct: 276 EVNL 279


>gi|304316058|ref|YP_003851203.1| endonuclease/exonuclease/phosphatase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302777560|gb|ADL68119.1| Endonuclease/exonuclease/phosphatase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 232

 Score = 50.9 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/263 (16%), Positives = 87/263 (33%), Gaps = 45/263 (17%)

Query: 3   VVTVATWNVNS---I--RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57
           ++T+ T+N++    I     I+ ++ +IK++  D+I LQE          +T    +Y +
Sbjct: 2   ILTIMTYNIHGGKDIDDNLTIYGISNFIKQSKADVIGLQEV---------DTYLGRSYFL 52

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
                 +       +    I+I     G+ +  +   ++                   G 
Sbjct: 53  NEIKYLAKRLKMYYAFGPNIKIGLGSFGNGILSRYPIVKKN----------NYHLTSTGE 102

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
                    ++   ++   F +  L L           I+        P+I   D   T 
Sbjct: 103 RRGVLSVLIELDSYRKIW-FLTTHLGLNSKERVIQSQEILKIIKRLDYPVILTGDFNETP 161

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA-TSLL 236
           E  +++  + ++    A  A  D      ++ Y          +RID+IM S +     +
Sbjct: 162 EN-EAYSIINHVLVDGAFSANSD------YYSYLDGDEP----VRIDYIMHSKDISVESI 210

Query: 237 HSARIDTKPRGWTKPSDHTPVIV 259
            +             SDH PVI 
Sbjct: 211 KAVD--------CNLSDHFPVIA 225


>gi|3021428|emb|CAA10995.1| neutral sphingomyelinase [Homo sapiens]
          Length = 423

 Score = 50.9 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/297 (14%), Positives = 90/297 (30%), Gaps = 37/297 (12%)

Query: 4   VTVATWNVNSI------RA-RIHNLAAWIKENNPDIICLQETKT-EDKNFPFETLQS-LN 54
           + +   N   I      RA R+  L  ++ + + D+  L+E  + +D  +  + L     
Sbjct: 9   LRIFNLNCWGIPYLSKHRADRMRRLGDFLNQESFDLALLEEVWSEQDFQYLRQKLSPTYP 68

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN---- 110
                      +G+ + SK+   E+  H+   +           F+     L + +    
Sbjct: 69  AAHHFRSGIIGSGLCVFSKHPIQELTQHIYTLNGYPYMIHHGDWFSGKAVGLLVLHLSGM 128

Query: 111 -------LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                        N         +++      +F     +  + ++  GD N+ P+   C
Sbjct: 129 VLNAYVTHLHAEYNRQKDIYLAHRVAQAWELAQFIHHTSKKADVVLLCGDLNMHPEDLGC 188

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223
                W       LE R      +                                G+RI
Sbjct: 189 CLLKEWTGLHDAYLETRDFKGSEEGNTMVPKNCYVSQQEL-----------KPFPFGVRI 237

Query: 224 DHIM---LSPEATSLLHSARIDT--KPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTS 275
           D+++   +S        S    T   P   T  SDH  ++ +L +     +Q  S++
Sbjct: 238 DYVLYKAVS-GFYISCKSFETTTGFDPHSGTPLSDHEALMATLFVRHSPPQQNPSST 293


>gi|290961878|ref|YP_003493060.1| hydrolase [Streptomyces scabiei 87.22]
 gi|260651404|emb|CBG74526.1| putative hydrolase [Streptomyces scabiei 87.22]
          Length = 489

 Score = 50.9 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/276 (14%), Positives = 67/276 (24%), Gaps = 34/276 (12%)

Query: 4   VTVATWNVN--SIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           + V TWN+     R R H       I E   D++ LQET         E   +L ++   
Sbjct: 222 LRVMTWNLWHGGTRVRDHRAKQLEVITETGADVVGLQETYGTAA---RELADALGWY--- 275

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
                      +    PI      P       A     T +     +     +  H +  
Sbjct: 276 --HHQAGDNLGIISRHPITARFGDPDVGFYGAAGVRVRTGSGAEVDV-----WTVHLDYK 328

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDY-NIIPQPHDCYNPIIWENDACFTLE 178
               Y+     ++     A + + L +           +P             D      
Sbjct: 329 PYGPYEAAFDGLEAAELIAHEEVRLAQLRDCLRRIDGSVPVVLVGDFNSPSHLDRPDVDW 388

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI-----RIDHIMLSPEAT 233
                 +   +  +               W           G      RID ++     T
Sbjct: 389 PVTLAAETAGLRDSYREAHPDPVRQPGHTWSPIHVEHEDGSGRPEPQDRIDFVL-HRGLT 447

Query: 234 SLLHSARID--------TKPRGWTKPSDHTPVIVSL 261
             +  +R                  PSDH  VI + 
Sbjct: 448 --VLDSRTCVSGTPRPWPDVEDNDWPSDHAAVITTF 481


>gi|206974292|ref|ZP_03235209.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus H3081.97]
 gi|217957955|ref|YP_002336499.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus AH187]
 gi|222094154|ref|YP_002528211.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus Q1]
 gi|229137219|ref|ZP_04265836.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST26]
 gi|206747532|gb|EDZ58922.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus H3081.97]
 gi|217066613|gb|ACJ80863.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus AH187]
 gi|221238209|gb|ACM10919.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus Q1]
 gi|228646214|gb|EEL02431.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST26]
          Length = 263

 Score = 50.9 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/271 (12%), Positives = 63/271 (23%), Gaps = 19/271 (7%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET------KTEDKNFPFETLQS 52
           + + T N +S +      +I  LA  I+E   D+I LQE       K    N   +    
Sbjct: 1   MKLLTLNCHSWQEENQIEKIKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGL 60

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           L              +     +   ++                +  F    +        
Sbjct: 61  LLLEELKALHVKDYNITWDFSHIGYDVYEEGLAIITKHNVVKEDTFFISENKDTAYWKTR 120

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                 I     +              +    ++        +         +       
Sbjct: 121 KIVSATIAYNGKNITFYSCHLGWWNDEEESFKDQVNRLMERVDSNELSFLMGDFNNNARL 180

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                E           G               + WD           +RID I+ +   
Sbjct: 181 QGEGYEYMMQKGLYDTYGLAIEKDEGTTVQGEIAGWD------ENKHNLRIDLILCNRS- 233

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              + S+++          SDH  V V +DI
Sbjct: 234 -EKVCSSKVIFNGTNRNIISDHFGVEVQVDI 263


>gi|42565086|ref|NP_188790.2| endonuclease/exonuclease/phosphatase family protein [Arabidopsis
           thaliana]
 gi|11994389|dbj|BAB02348.1| unnamed protein product [Arabidopsis thaliana]
 gi|51971657|dbj|BAD44493.1| unknown protein [Arabidopsis thaliana]
          Length = 458

 Score = 50.9 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 49/268 (18%), Positives = 86/268 (32%), Gaps = 27/268 (10%)

Query: 12  NSIRARIHNLAAWIKENNPDIICLQETKTEDKNF--PFETLQ-SLNY-HIETCGQKSYNG 67
           N   +R  ++A  ++E + DI+ LQ+ K E++    P   L  +L   ++         G
Sbjct: 173 NGYSSR-RSIAELLRELDADILALQDVKAEEETLMKPLSDLASALGMKYVFAESWAPEYG 231

Query: 68  VAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDK 127
            AILSK+   +       D  D +              + +    L H +     K  D 
Sbjct: 232 NAILSKWPIKKWRVQRIADVDDFRNVLKVTVEIPWAGDVNVYCTQLDHLDENWRMKQIDA 291

Query: 128 ISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQ 187
           I+        +   L      +   DY+I    H               +EV +  +   
Sbjct: 292 ITRGDE----SPHILLGGLNSLDGSDYSIARWNHIVKYYED-SGKPTPRVEVMRFLKGKG 346

Query: 188 NMGFTDAIRATHDTHHLYSFWDYYADSWSKN------KGIRIDHIMLSPEATSLLHSARI 241
            +   +          +         +  +N       G R+D+I+ SPE+         
Sbjct: 347 YLDSKEFAGECEPVVII---------AKGQNVQGTCKYGTRVDYILASPESPYEFVPGS- 396

Query: 242 DTKPRGWTKPSDHTPVIVSLDIPEPRKK 269
                     SDH  V V L I + R +
Sbjct: 397 -YSVVSSKGTSDHHIVKVDLVITKERSR 423


>gi|222150529|ref|YP_002559682.1| hypothetical protein MCCL_0279 [Macrococcus caseolyticus JCSC5402]
 gi|222119651|dbj|BAH16986.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
          Length = 273

 Score = 50.9 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/284 (14%), Positives = 77/284 (27%), Gaps = 35/284 (12%)

Query: 4   VTVATWNVNSIRARIHN--------LAAWIKENNPDIICLQETKTEDKN----------- 44
           + V T N +S    + +        + A I + + DII LQE     +N           
Sbjct: 1   MKVLTLNTHS---WLEDNQEEKLNVIVARILKADYDIIALQEVNQLSENDVIDAPNNLCP 57

Query: 45  -FPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
                 ++  N+  E   +    GV     +    I   +       +   + +   I+ 
Sbjct: 58  LLDQTPIKEGNFAYEIVEKLRALGVTYYWSFAMSHIGYDIYD-----EGSALLSKTPIDP 112

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLI-FAGDYNIIPQPHD 162
             + +     P         +          L  +            F+ ++N       
Sbjct: 113 YAVFVSIEESPDDYKSRKILFGKTNVGENEMLAVSCHYSWWMTFAEGFSYEWNNTINALS 172

Query: 163 CYNPIIWENDACFTLEVR--QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG 220
            Y             E     ++    +    D           ++     A  W  N G
Sbjct: 173 HYELPKLLMGDFNNPEGTEGYAYVLKSDANIQDTYTVAKKRTGSHTIEKNIAG-WEDNDG 231

Query: 221 -IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            +RID I  +PE    +         R     SDH  V   +++
Sbjct: 232 KLRIDFIFSTPEF--KVLHHGTVFDGRTEAIVSDHFGVEAEIEL 273


>gi|157877592|ref|XP_001687113.1| endonuclease/exonuclease protein-like protein [Leishmania major]
 gi|68130188|emb|CAJ09499.1| endonuclease/exonuclease protein-like protein [Leishmania major
          strain Friedlin]
          Length = 735

 Score = 50.9 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 7/43 (16%)

Query: 4  VTVATWNVNS-------IRARIHNLAAWIKENNPDIICLQETK 39
          + + +WNV         IR R  ++  +      DIICLQE K
Sbjct: 1  MFLISWNVAGWSSTSQAIRERFGSIHDFFACTEADIICLQECK 43



 Score = 47.1 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 17/37 (45%)

Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
               Y+ WD   +   +N+G R+D+I++       + 
Sbjct: 472 CPCPYTCWDQSRNRRLENEGTRLDYILVDSALLPAVV 508


>gi|256395196|ref|YP_003116760.1| endonuclease/exonuclease/phosphatase [Catenulispora acidiphila DSM
           44928]
 gi|256361422|gb|ACU74919.1| Endonuclease/exonuclease/phosphatase [Catenulispora acidiphila DSM
           44928]
          Length = 236

 Score = 50.9 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/264 (11%), Positives = 68/264 (25%), Gaps = 35/264 (13%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
            V + T+NV S+R     LA  ++   PD++C+QE                         
Sbjct: 4   TVRILTYNVRSLRDDRAALARVVRSCAPDVVCVQE-------------------SPRFFG 44

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
                  + + +    +          + A             L     Y   G  + + 
Sbjct: 45  WQRAARTMAASFGLSVVAGGANASGNLLLAGPNVEVDAAEVLYLEHKRGYHLRGMALAAL 104

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           +       +       +    + +     G         +     +   D        + 
Sbjct: 105 RIGASRFTVASTHLSMNLEQRVHQAGEVLGHL-DGFAERNQTTSRVLAGDFNSYPGSVEW 163

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
               + +     +         ++      + +      R+D + +S +    +  A + 
Sbjct: 164 GILTERLADAWMVS---PMGDEFT--STGPNPYQ-----RLDAVFVSRDVD--VVRAGVP 211

Query: 243 TKPRGWTK---PSDHTPVIVSLDI 263
           T           SDH PV+  L I
Sbjct: 212 TDLIAKADEALASDHRPVLAVLRI 235


>gi|260598074|ref|YP_003210645.1| hypothetical protein CTU_22820 [Cronobacter turicensis z3032]
 gi|260217251|emb|CBA31170.1| hypothetical protein CTU_22820 [Cronobacter turicensis z3032]
          Length = 370

 Score = 50.9 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/263 (14%), Positives = 73/263 (27%), Gaps = 32/263 (12%)

Query: 22  AAWIKENNPDIICLQETKTEDK--NFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEI 79
           A  + + N D++ + E ++      F  E + +L                  S+   + +
Sbjct: 119 AKVMSDLNADVLAVVEAESRPALAAFNQEIIAALGGEPFRHVMVIDGND---SRGIDVGL 175

Query: 80  VTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFAS 139
           +T        +++   +          R    Y        +          K +   A 
Sbjct: 176 LTGAEYPIGPMRSHVDDRDARGQLIFSRDCPEYSVPLANGDTLWVMVNHLKSKGYGGKAE 235

Query: 140 QRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH 199
                +       D     +       I    D   T E       L+     DA     
Sbjct: 236 SDARRKAQAQRVADIYKARRDAGE-QFIAIAGDFNDTPESDTLAPLLKETDLRDAFTHPA 294

Query: 200 DTHHLY--SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRG-WTKP----- 251
             +  Y  ++     +S   NK   +D+I+LSP     + +  +  K      +P     
Sbjct: 295 FDNGGYPGTW----GNSAKNNK---LDYILLSPALWERVTAGGVIRKGMWPGERPVKWDV 347

Query: 252 -----------SDHTPVIVSLDI 263
                      SDH  + V L+I
Sbjct: 348 YPELKKPQQAGSDHAALWVDLNI 370


>gi|257458602|ref|ZP_05623737.1| endonuclease/exonuclease/phosphatase family protein [Treponema
           vincentii ATCC 35580]
 gi|257444036|gb|EEV19144.1| endonuclease/exonuclease/phosphatase family protein [Treponema
           vincentii ATCC 35580]
          Length = 260

 Score = 50.9 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/274 (11%), Positives = 73/274 (26%), Gaps = 29/274 (10%)

Query: 4   VTVATWNVNSIRARIHNL----AAWI--KENNPDIICLQETKTEDKNFPFETLQSLNY-- 55
           + + TWN        + L    AA++     N DI  +QE    +     E  + L    
Sbjct: 1   MKICTWN------CRYGLTFEKAAYLCQAGYNADIYAIQEYDMRNNKPIHEIEKHLGQLQ 54

Query: 56  ------HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
                        +S   + +        I                + T     ++  + 
Sbjct: 55  DKYGDGREYKDNAESGGDLGLALFSNTYRIERIYSNTIPYRYVVPYKVTCKETNESFTLI 114

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
           +++    +   + K D  +  I         +L + E        +              
Sbjct: 115 HVWTKIADLEANQKQDYIMQVIGALENPTYNKLLIPEDNKALWIGDFNSSMQLKNEIDKN 174

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
            +       +    +      +    +  +     ++F   Y +   +      D+I   
Sbjct: 175 NHT----RFLETMKKYGLVSAYHTNRQKKYGKEDQFTFIGTYRNGQQRFFN---DYIFYH 227

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            +      +  I      ++  SDH PV+  L +
Sbjct: 228 HD-RFKCKTVTIGRFNT-FSFFSDHCPVLAELQL 259


>gi|255013349|ref|ZP_05285475.1| hypothetical protein B2_05535 [Bacteroides sp. 2_1_7]
 gi|298376689|ref|ZP_06986644.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 3_1_19]
 gi|298266567|gb|EFI08225.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 3_1_19]
          Length = 281

 Score = 50.9 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/282 (12%), Positives = 78/282 (27%), Gaps = 54/282 (19%)

Query: 3   VVTVATWNV------NSIRARIHN---LAAWIKENNPDIICLQE---------TKTEDKN 44
           V+ +AT+N+      +   A  H    +   I+    D+   QE          +  D  
Sbjct: 25  VLKIATFNLRMDTPSDGENAWFHRKDMVNDLIRFYGFDLFGTQEGFTHQLNDILRLSDYR 84

Query: 45  FP---FETLQSLNYHIETCGQKSYNGV----AILSKYQPIEIVTHLPGDDLDVQARFIEA 97
           F     +  +    H     +     V           P +      G   +    + + 
Sbjct: 85  FIGVGRDDGKDAGEHCAIFYRSDRFKVLDQGDFWLSEHPEKPGRGWDGTCCNRICTWGKF 144

Query: 98  TFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII 157
               N +     N++  +   +   +  + +    + +          +           
Sbjct: 145 EDLKNHKQFYFFNVHYEYEGDVARRESSNLMISRIKSIAGNQPVFLTGDF---------- 194

Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK 217
                         +A  T E  +       +  +  I        + ++  Y +   ++
Sbjct: 195 --------------NAFPTEEPIRILNDSGFLNDSYKITKEAPFGPVCTYHGYDSTIKTE 240

Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
               R+D+I ++      +    + T       PSDH PV+V
Sbjct: 241 E---RLDYIWVTDSI--QIDKYGVLTNTLYGHTPSDHFPVMV 277


>gi|146308751|ref|YP_001189216.1| endonuclease/exonuclease/phosphatase [Pseudomonas mendocina ymp]
 gi|145576952|gb|ABP86484.1| Endonuclease/exonuclease/phosphatase [Pseudomonas mendocina ymp]
          Length = 362

 Score = 50.9 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/317 (12%), Positives = 78/317 (24%), Gaps = 61/317 (19%)

Query: 4   VTVATWNV---NSIR-----------------------ARIHNLAAWIKENNPDIICLQE 37
           + V TWNV      R                       A +  +   +++  PD++ LQE
Sbjct: 54  LKVMTWNVQYLAGKRHVFWYDLPGGDGPDERPSSDDLAATLDEVVRVLRDEQPDLVLLQE 113

Query: 38  T----KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR 93
                K  D       LQ     +  C  +++   A    +  I     +    L     
Sbjct: 114 LHDGAKASDYQDQLALLQERLADLYPCSSQAFYWKAAFVPHPRILGSVGMKLGTLSRFQI 173

Query: 94  FIEATFTINTQT-------------LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQ 140
                  +                 L + +L +  G  + +                   
Sbjct: 174 ARAERLQLPEIPSDPLSRQFQLKRALLVSHLPIRGGGELVAINTHFDAFAQGDDTMRRQV 233

Query: 141 RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH- 199
           ++               P        ++         E ++ +    +     A R    
Sbjct: 234 QMTDALLQQLQA--GASPWILGGDLNLLPPGQFQHLPENQRGWYAADSELQDLAGRYPMI 291

Query: 200 ---------DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
                         Y+ +     +   ++   +D++  SP  T      R      G   
Sbjct: 292 PSLQQASGAQQAQWYTHYPNDPAASGPDRT--LDYLFYSPRLTPFASQVR-QHDTLGI-- 346

Query: 251 PSDHTPVIVSLDIPEPR 267
            SDH PVI    +P   
Sbjct: 347 -SDHLPVIGRFFLPSEE 362


>gi|293571332|ref|ZP_06682364.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecium E980]
 gi|291608597|gb|EFF37887.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecium E980]
          Length = 274

 Score = 50.9 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/282 (14%), Positives = 74/282 (26%), Gaps = 31/282 (10%)

Query: 4   VTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQET--KTEDKNFPFETLQSLNY- 55
           + + T N +S      + ++  +A  I     D+I LQE     + K    E L++ +  
Sbjct: 1   MKIMTLNTHSWLEEEPQEKLKQIAQKICHEQYDVIALQEVNQTMDAKGLTSEQLKNFSQV 60

Query: 56  ---------HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
                    +   C  +          +            +        +   +      
Sbjct: 61  QEQTPVRSDNFAYCLIQLLAEQGETYYWSWEMSHIGYAIYEEGNALLSKQPLTSQTHLVS 120

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
                   H   I   +   K   I       S  ++ +    F                
Sbjct: 121 ETKEKEDYHTRKILVGQTSVKTQCITVASCHFSWWVDEKSGFAFEWKELEASLAPLTTPL 180

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK-GIRIDH 225
            +  +                 +   DA           +  +   D W  NK G+RID+
Sbjct: 181 YLLGDFNNPAEGSGYDLVAKSQLPIRDAYPIAQKKQAEAT-IEKRIDGWENNKEGLRIDY 239

Query: 226 IMLSPEATSLLHSARIDTKPR---GWTKP--SDHTPVIVSLD 262
           I +            + +  R   G   P  SDH  V V+L+
Sbjct: 240 IYVP-------QDCFVTSYQRIFDGENGPIVSDHYGVAVTLE 274


>gi|12652591|gb|AAH00038.1| Sphingomyelin phosphodiesterase 2, neutral membrane (neutral
           sphingomyelinase) [Homo sapiens]
 gi|119568731|gb|EAW48346.1| sphingomyelin phosphodiesterase 2, neutral membrane (neutral
           sphingomyelinase) [Homo sapiens]
 gi|123981952|gb|ABM82805.1| sphingomyelin phosphodiesterase 2, neutral membrane (neutral
           sphingomyelinase) [synthetic construct]
 gi|312151710|gb|ADQ32367.1| sphingomyelin phosphodiesterase 2, neutral membrane (neutral
           sphingomyelinase) [synthetic construct]
          Length = 423

 Score = 50.9 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/297 (14%), Positives = 90/297 (30%), Gaps = 37/297 (12%)

Query: 4   VTVATWNVNSI------RA-RIHNLAAWIKENNPDIICLQETKT-EDKNFPFETLQS-LN 54
           + +   N   I      RA R+  L  ++ + + D+  L+E  + +D  +  + L     
Sbjct: 9   LRIFNLNCWGIPYLSKHRADRMRRLGDFLNQESFDLALLEEVWSEQDFQYLRQKLSPTYP 68

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN---- 110
                      +G+ + SK+   E+  H+   +           F+     L + +    
Sbjct: 69  AAHHFRSGIIGSGLCVFSKHPIQELTQHIYTLNGYPYMIHHGDWFSGKAVGLLVLHLSGM 128

Query: 111 -------LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                        N         +++      +F     +  + ++  GD N+ P+   C
Sbjct: 129 VLNAYVTHLHAEYNRQKDIYLAHRVAQAWELAQFIHHTSKKADVVLLCGDLNMHPEDLGC 188

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223
                W       LE R      +                                G+RI
Sbjct: 189 CLLKEWTGLHDAYLETRDFKGSEEGNTMVPKNCYVSQQEL-----------KPFPFGVRI 237

Query: 224 DHIM---LSPEATSLLHSARIDT--KPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTS 275
           D+++   +S        S    T   P   T  SDH  ++ +L +     +Q  S++
Sbjct: 238 DYVLYKAVS-GFYISCKSFETTTGFDPHSGTPLSDHEALMATLFVRHSPPQQNPSST 293


>gi|294673423|ref|YP_003574039.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           ruminicola 23]
 gi|294471767|gb|ADE81156.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           ruminicola 23]
          Length = 358

 Score = 50.9 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/276 (14%), Positives = 75/276 (27%), Gaps = 32/276 (11%)

Query: 4   VTVATWNVN-------SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56
           + +AT+NV               ++ + +K+   D+ C QE    D++   +   S   +
Sbjct: 105 IKIATYNVAMFGRETSGF--IAQDILSEMKKQKVDVACFQEY--NDQSGDKKNSDSYKEY 160

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                Q  ++ V          IV     +        + A        +R+ N +L   
Sbjct: 161 FPYMAQGEHDMVIYSRY----PIVKSKNMNFEMTNNSAMWAEVNYKGTVIRVYNAHLETT 216

Query: 117 NPITSTKYD---DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
               +                              + A          D  N        
Sbjct: 217 GINGTMYRAGKLMSQGMDIESNALLRALYGNYTIGMIARSGQANVLAQDMRNCERPIIVC 276

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
               +V  S+     +G          +  +Y+F             +RID+I       
Sbjct: 277 GDFNDVPYSYVYNTMLGDKVDGFTECGSGFMYTF---RGGKKK----VRIDYIFHDKTFL 329

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKK 269
                    +  +     SDH PV   + IP+ ++K
Sbjct: 330 G-------LSYYKRELSYSDHNPVFSKIQIPQDQQK 358


>gi|260901207|ref|ZP_05909602.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus
           AQ4037]
 gi|308106699|gb|EFO44239.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus
           AQ4037]
          Length = 442

 Score = 50.9 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/283 (14%), Positives = 81/283 (28%), Gaps = 43/283 (15%)

Query: 4   VTVATWNVNSIRA-------RIHNLAAWIKENNPDIICLQETKTE-DKNFPFETLQSLNY 55
           + + T+N+ ++ A       R   +  +IK    D++ LQE        F  E  +   Y
Sbjct: 178 LKLMTYNIWALPAIASHIGERYELIPDYIK--GYDVLALQEVFASGRDAFLRELAKDYPY 235

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
             +   +  +N             + +         +               I      H
Sbjct: 236 QTKMLDKDGFNVYDGGVVIVSRYPIVNEAQYVFPDCSGTDCFADKGVNYAEIIKGGQAYH 295

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
                +  +D   +   R  +F   R         A   NI       Y+     N    
Sbjct: 296 VFATHTASFDTDTAREYRQRQFQQMR-------TMAQSLNIPNNETVVYSGDFNVNK--- 345

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYS--FWDYYADSWS-------KNKGIRIDHI 226
                              + A    +  Y+   +D   ++++       +N    +D++
Sbjct: 346 ------LKFPGDYQQMIANLSAMEPQYSGYTASTFDPRINNFAGEALSGGENVEY-LDYV 398

Query: 227 MLSPEA-TSLLHSARID---TKPRGWTKP---SDHTPVIVSLD 262
           M+S E      +  R+D   +   G  K    SDH PV   + 
Sbjct: 399 MVSNEYGVKSFNDNRVDVPRSTAEGLWKHYNLSDHFPVSAVIK 441


>gi|225427417|ref|XP_002264301.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 1549

 Score = 50.9 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/264 (12%), Positives = 70/264 (26%), Gaps = 35/264 (13%)

Query: 2   SVVTVATWNVNSI----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57
             ++  +WN   +      R+  L   ++E  P++I L ET         E    LNY  
Sbjct: 359 RTMSCLSWNCRGLGGLETVRL--LTNLVREKKPEVIFLIETFCTSARI-SEIANKLNYE- 414

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
                         S        +   G     + +              +         
Sbjct: 415 -------------GSYGVNCRGHSAGLGLIWRCKDKVTILGSHDRYIDAIVTLENQRMFR 461

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
                   ++      +    +       P    GD+N +    +               
Sbjct: 462 LTGFYGLANRSQRSSSWEILRNLHAAHSLPWCVIGDFNELMHQSEKCGNHPHPGSLIEAF 521

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
               +   L ++G+             Y++        ++    R+D  ++S +   L H
Sbjct: 522 RQVVTNCGLSDLGYVGY---------AYTW--ERGRGTTRWVEERLDRALVSADWKHLFH 570

Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261
            +        +   SDH PV++ L
Sbjct: 571 QS---RLIHLFVSTSDHLPVLLEL 591


>gi|313156920|gb|EFR56358.1| putative lipoprotein [Alistipes sp. HGB5]
          Length = 673

 Score = 50.9 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/268 (15%), Positives = 63/268 (23%), Gaps = 39/268 (14%)

Query: 21  LAAWIKENNPDIICLQE---TKTEDKNFPFETLQSLN-YHIETCGQKSYNGVAILSKYQP 76
           LA  I +N  DI   QE   T  +++  P    Q    Y     G+ S +GV+  +    
Sbjct: 75  LAQSIVKNKWDIFGFQEANGT-IQNE-LPTLVGQQGGKYEWWFVGRDSQDGVSGEALGIA 132

Query: 77  IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRF-- 134
                    D             +     L    +                +        
Sbjct: 133 YNPDRFELTDKHFFWISPTPDEMSYGWDELGYHRIAACAMVTDKLYNKQFFMMVTHAPLG 192

Query: 135 -----------LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
                      +           P I  GD N               ND+  T+E     
Sbjct: 193 ATARAEGAKLLIEREKMYNPDGIPSILVGDMNAAMDDASSKTLRTHWNDSFLTVESDFVS 252

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             +                                   RID+I    +    L S ++D 
Sbjct: 253 GPVGTFNGHKITADLTQATA------------------RIDYIYSRGDVE--LKSYKVDN 292

Query: 244 KPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271
              G   PSDH P+ +  D    +    
Sbjct: 293 TVYGNIYPSDHCPLTIQFDTDYEKPAPD 320


>gi|241766052|ref|ZP_04763968.1| Endonuclease/exonuclease/phosphatase [Acidovorax delafieldii 2AN]
 gi|241363933|gb|EER59221.1| Endonuclease/exonuclease/phosphatase [Acidovorax delafieldii 2AN]
          Length = 249

 Score = 50.9 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/284 (14%), Positives = 89/284 (31%), Gaps = 67/284 (23%)

Query: 3   VVTVATWNVN----SI----RARIHNLAAWIKENNPDIICLQET-KTE----------DK 43
           ++ VAT+N++     I    R  IHNL   +++ + DI+CLQE  K              
Sbjct: 10  ILRVATYNIHKGVQGIGPARRLEIHNLGLAVEQLDADIVCLQEVRKVHRREAAYFERWPD 69

Query: 44  NFPFETLQSLNYHIET----CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF 99
               E L    Y          +   +G A+LS++  I        D    Q   +    
Sbjct: 70  VPQAEYLAPEGYEAVYRTNAFTRHGEHGNALLSRWPVIGHQHEDISDHRFEQRGLLHVEL 129

Query: 100 TINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159
             + + + +  ++L         + +    +I+R +   S  +   +   +      +  
Sbjct: 130 DAHGRRVHVIVVHLGLIPGSRVRQVERLQQFIEREVPTGSPVVVAGDFNDWGLQIKRMLS 189

Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK 219
               Y                                   D    +++        ++  
Sbjct: 190 GFGLYEF---------------------------------DAPRAFTYP-------ARLP 209

Query: 220 GIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            +++DH+ +    + +        + R W + SDH P+I    +
Sbjct: 210 LVQLDHVYV-RGLSPIGLHV---PRGRIWWRMSDHLPLIAEFRL 249


>gi|147792395|emb|CAN70278.1| hypothetical protein VITISV_015612 [Vitis vinifera]
          Length = 853

 Score = 50.9 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/213 (11%), Positives = 58/213 (27%), Gaps = 19/213 (8%)

Query: 5   TVATWNVNSIRARIHN--LAAWIKENNPDIICLQETK--TEDKNFPFETLQSLNYHI--- 57
            + +WN   + +R     +  ++   NPD++ LQE+K    D+ F     +  +      
Sbjct: 378 KILSWNTRGLGSRKKRRTVRRFLSTQNPDVVMLQESKREIWDRRFVSSVWKGRSLEWAAL 437

Query: 58  ------------ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT 105
                           +       + S    +++ +   G                    
Sbjct: 438 PACGASGGILILWDSIKFKCTEKVLGSFSVTVKLNSDEKGSFWLTSVYGPNKPLWRKDFW 497

Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165
           L + +LY               I  I   +  +   + +     F  +  ++  P     
Sbjct: 498 LELQDLYGLTFPRWCVGGDFKVIRRISEKMXDSRLTVNMRCFDEFIRESGLLDPPLRNAA 557

Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT 198
              +EN      E ++ F+        +     
Sbjct: 558 FTWFENMWLLHPEFKEKFRDWWQECTVEGWEGH 590


>gi|71895533|ref|NP_001026218.1| protein angel homolog 2 [Gallus gallus]
 gi|53127786|emb|CAG31222.1| hypothetical protein RCJMB04_3g5 [Gallus gallus]
          Length = 558

 Score = 50.9 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/108 (16%), Positives = 35/108 (32%), Gaps = 5/108 (4%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73
           R  N+   IK+ + D++CLQE   ++ ++  E    L+SL YH E   +           
Sbjct: 212 RFPNILQEIKQLDADVLCLQEV--QEDHYRKEIKSSLESLGYHCEYKMRTGRKSDGCAIC 269

Query: 74  YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           ++  +            +              L +   +    N    
Sbjct: 270 FKTSKFSLISSNPVEFFRRDIPLLDRDNVGLVLLLQPKFPCKTNAAIC 317


>gi|307323928|ref|ZP_07603137.1| Endonuclease/exonuclease/phosphatase [Streptomyces violaceusniger
           Tu 4113]
 gi|306890377|gb|EFN21354.1| Endonuclease/exonuclease/phosphatase [Streptomyces violaceusniger
           Tu 4113]
          Length = 303

 Score = 50.9 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/268 (13%), Positives = 72/268 (26%), Gaps = 24/268 (8%)

Query: 6   VATWNV--------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57
           V T+N+        NS   R   +   ++   P ++  QE          +    L    
Sbjct: 50  VMTFNLRYAGDSEPNSWGRRRPVMRELLRRARPHLLGTQE--GLYGQL-RDIAHDLGQRY 106

Query: 58  ETCGQKSYNGVA--ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
              G     G     ++ +     +  +  D   +               +     ++  
Sbjct: 107 AWIGTGRMGGSRDEFMAVFYDTGRLEPVEYDHFWLSDTPNVIGSNTWGGAVVRMVTWVRF 166

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
            +  T  ++    + +    + A             G  + +P+       +    +   
Sbjct: 167 HDRRTGEEFYALNTHLDHRSQNARDHAAALITERLGGLDSALPRIVTGDFNVAAHGN--- 223

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
                        +   D        +  +  +           G RID I+ SP     
Sbjct: 224 -PVYDAMLHGGTLVDSWDTAERRGPLYGTFHGFGPLVPD-----GDRIDWILTSPGV--R 275

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            H A IDT       PSDH PV   L++
Sbjct: 276 THHAVIDTYSGDGQYPSDHLPVRTVLEL 303


>gi|86358327|ref|YP_470219.1| putative endonuclease/exonuclease/phosphatase family protein
           [Rhizobium etli CFN 42]
 gi|86282429|gb|ABC91492.1| putative endonuclease/exonuclease/phosphatase family protein
           [Rhizobium etli CFN 42]
          Length = 369

 Score = 50.9 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 24/112 (21%)

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
              E   +     + GF + +         ++   Y+A    +    ++D+I LSP   +
Sbjct: 260 HQPEAESALDVFSHDGFAENVVVRRQPLDRWTL--YHARGPQEQHLCQLDYIWLSPALAA 317

Query: 235 L--------LHSA-----------RIDTKPR-GWTKP--SDHTPVIVSLDIP 264
                    + +             ++  PR GW +P  SDH PV+++LD+P
Sbjct: 318 HNSGRVPEIIRNGQPYRTVFPPGQEVERYPRTGWDRPKASDHCPVVMTLDLP 369


>gi|7488319|pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
           (fragment)
          Length = 1365

 Score = 50.9 bits (120), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 47/258 (18%), Positives = 84/258 (32%), Gaps = 33/258 (12%)

Query: 6   VATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           V +WN   +R    I  L    K++ PDI+ L ETK   ++F ++    L Y      + 
Sbjct: 2   VISWNCQGLRNPWTIRYLKEMKKDHFPDILFLMETK-NSQDFVYKVFCWLGYDFIHTVEP 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
                   S    I   +HL  + L      ++   +   +   I  +Y      +    
Sbjct: 61  E-----GRSGGLAIFWKSHLEIEFLYADKNLMDLQVSSRNKVWFISCVYGLPVTHMRPKL 115

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           ++             S  L+  E     GD+N I    +          +    E     
Sbjct: 116 WEHL----------NSIGLKRAEAWCLIGDFNDIRSNDEKLGGPRRSPSSFQCFEHMLLN 165

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             +  +G          T + +++     D W + K   +D    +P   S+  +A    
Sbjct: 166 CSMHELGS---------TGNSFTWGGNRNDQWVQCK---LDRCFGNPAWFSIFPNA---H 210

Query: 244 KPRGWTKPSDHTPVIVSL 261
           +       SDH PV+V  
Sbjct: 211 QWFLEKFGSDHRPVLVKF 228


>gi|29349191|ref|NP_812694.1| hypothetical protein BT_3783 [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|29341099|gb|AAO78888.1| putative endonuclease/exonuclease/phosphatase family protein
           [Bacteroides thetaiotaomicron VPI-5482]
          Length = 315

 Score = 50.6 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/292 (14%), Positives = 78/292 (26%), Gaps = 45/292 (15%)

Query: 4   VTVATWNV-----------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52
           +TVA++N+           +    R   +A  ++ ++ DI   QE          E L  
Sbjct: 27  LTVASYNLRNANGSDSARGDGWGQRYPVIAQMVQYHDFDIFGTQECFLHQLKDMKEALPG 86

Query: 53  LNY-HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
            +Y  +     K     + +        +       L          +      +     
Sbjct: 87  YDYIGVGRDDGKDKGEHSAIFYRTDKFDIVEKGDFWLSETPDVPSKGWDAVLPRICSWGH 146

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
           +           ++  +  I +  R  S  L  E+        N+              N
Sbjct: 147 FKCKDTGFEFLFFNLHMDHIGKKARVESAFLVQEKMKELGRGKNLP------AILTGDFN 200

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
                        K       +     +  +  ++ +D   +S+++    RIDHI +SP 
Sbjct: 201 VDQTHQSYDAFVSKGVLCDSYEKCDYRYALNGTFNNFD--PNSFTE---SRIDHIFVSPS 255

Query: 232 A--------------------TSLLHSA--RIDTKPRGWTKPSDHTPVIVSL 261
                                   +      I  K      PSDH PV V L
Sbjct: 256 FHVKRYGVLTDTYRSVRENSKKEDVRDCPEEITIKAYEARTPSDHFPVKVEL 307


>gi|20092035|ref|NP_618110.1| hypothetical protein MA3219 [Methanosarcina acetivorans C2A]
 gi|19917247|gb|AAM06590.1| predicted protein [Methanosarcina acetivorans C2A]
          Length = 330

 Score = 50.6 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/335 (10%), Positives = 89/335 (26%), Gaps = 80/335 (23%)

Query: 4   VTVATWNVNSI-------------RARIHNLAAWIKENNPDIICLQETKTEDK------- 43
           + +AT+N+ ++             R  +  +   ++  N DI+CLQE   +++       
Sbjct: 3   LRIATFNLENLDFQKSNKEPTLEERIAV--MRPQLQRVNADILCLQEVNGQEEVGHPRRL 60

Query: 44  ----------NFPF--------------------------ETLQSLNYHIETCGQKSYNG 67
                      +                            E L+   Y         Y  
Sbjct: 61  LALEALLKDTQYASFNRVSTVDEGGSQVYDERNLVILSRCEILEHHQYKHNFASAPLYRI 120

Query: 68  VAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDK 127
           V  ++     +    +  +   + A+       ++   L + +    +        Y  K
Sbjct: 121 VTAIANGGEEQTAKEITWERPILHAKIKVGEKVMDVINLHLKSKIPTYIPGQKLDNYTWK 180

Query: 128 ISWIKRFLRFASQRLELEE----PLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
            +       F S    + +     ++    +N    P                +E  +  
Sbjct: 181 TASGWAEGFFISSMKRVGQALEARMLIDDLFNKTENPWIVVCGDFNSEFDDVPVEAIRGR 240

Query: 184 QKLQ---NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            +      +                         + + KG  +DH+++  +  +    + 
Sbjct: 241 VENTGNGELARRIMFPCEMSIPE-----STRFSLYHQGKGNMLDHLLVCRDMLAYYKGSE 295

Query: 241 IDTKPRGWTKP----------SDHTPVIVSLDIPE 265
           +  +                 SDH+PVI   ++P+
Sbjct: 296 VHNELLHDESIAFATDIKFPESDHSPVIAEFEMPD 330


>gi|288800678|ref|ZP_06406135.1| endonuclease/exonuclease/phosphatase [Prevotella sp. oral taxon 299
           str. F0039]
 gi|288332139|gb|EFC70620.1| endonuclease/exonuclease/phosphatase [Prevotella sp. oral taxon 299
           str. F0039]
          Length = 270

 Score = 50.6 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/262 (14%), Positives = 66/262 (25%), Gaps = 29/262 (11%)

Query: 4   VTVATWNVNSIRARIHNL-----AAWIKENNPDIICLQET--KTEDKNFPFETLQSLNYH 56
           + V T+N   IR+   +      A  ++    DIICL E   ++  +    +        
Sbjct: 25  IKVITFN---IRSFEPDFDVAPYAELLRSEEADIICLNEVENRSSRQQRDGKFRD----- 76

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
           +     +  N   I      +        ++    +        I ++   + +  L   
Sbjct: 77  VVAELAQKLNMFEIFGYSYNLANKRGEYPEENYRYSLNELYGNAILSRYPILNSNCLQLP 136

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
            P  S      +            R+         G                        
Sbjct: 137 RPKGSADQRGVVYADILLPTKKMFRIASTHLDHMGGQLEQAEVLVSDKVYTSSIPMILTG 196

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
              +     + N   T   R  +D         Y   S        ID I  S       
Sbjct: 197 DMNQGPGSSVINKIETAFERMDNDNG------TYLGLSK-------IDFIFGSKG-KWTF 242

Query: 237 HSARIDTKPRGWTKPSDHTPVI 258
            S R+  +     + SDH PV+
Sbjct: 243 ESCRVLDRFFNGKELSDHCPVV 264


>gi|171910959|ref|ZP_02926429.1| hypothetical protein VspiD_07285 [Verrucomicrobium spinosum DSM
           4136]
          Length = 300

 Score = 50.6 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/277 (13%), Positives = 76/277 (27%), Gaps = 45/277 (16%)

Query: 4   VTVATWNVNSI------RA-RIHNLAAWIKENNPDIICLQETKTEDKNFPF-ETLQSLNY 55
           + V TWNV  +      R+ R+  +A  +    PDI+  QE   E       + LQ +  
Sbjct: 54  LRVVTWNVWGLHWITPLRSERLRKVAEEVARLKPDIVGFQEAFVEADRAELTQALQVVGL 113

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
                      G  +L   +   +         + +   ++       + L +  L L  
Sbjct: 114 EHSRYFHSGLVGSGLLMVSRYPVLAEGFIRYASNGRPEALQHGDWWAGKGLSLCTLDLGE 173

Query: 116 GNPI--TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
           G  +   +T    +    +      +Q  +L   +    +          +N     +  
Sbjct: 174 GRRLSFGNTHLHARYKENRYHATQLAQTAQLIPWVKKVRETGAPALWTGDWNNTPDGDVL 233

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS-PEA 232
              +E         +                                 R+DH+  S    
Sbjct: 234 SPLMEAGAWKLLSTDQP-------------------------------RVDHVFGSGEGW 262

Query: 233 TSLLHS-ARIDTKPRGWTK--PSDHTPVIVSLDIPEP 266
              +    +++ K         SDH  V V +++   
Sbjct: 263 EWQVVDQGKVNGKLESDPTVPWSDHAAVWVDVELRSK 299


>gi|32476790|ref|NP_869784.1| hypothetical protein RB11105 [Rhodopirellula baltica SH 1]
 gi|32447336|emb|CAD77162.1| probable secreted protein [Rhodopirellula baltica SH 1]
          Length = 286

 Score = 50.6 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/266 (13%), Positives = 74/266 (27%), Gaps = 43/266 (16%)

Query: 5   TVATWNV-----NSIRARIHNLAAWIKENNPDIICLQET--KTEDKNFPFETLQSLNYHI 57
            V ++N+     N  +  +   A  I +  PD + LQE   +        +  Q L  H+
Sbjct: 54  RVLSYNIKRGYGNDGKTDLPRTADVISKLKPDFVGLQEVDERCNRSG-KVDQAQWLGEHL 112

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
           +     +        +Y    +  +       V+              + + +       
Sbjct: 113 DMHAAFAPFMDYDGGRYGMAILSRYPIEKTESVELARGREPRVALVAHVTLPDGNKLTLV 172

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
            +      D     ++  +       L  P I  GD+N  P+                  
Sbjct: 173 NVHFDYIRDDTVRFEQATKVREFIRSLSNPAILLGDFNDTPE------------------ 214

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
                  +   +     + A       ++F               ID +  SPE    + 
Sbjct: 215 ------SRTVQLFQDGFVEADKPADDSFTF-SAEKPDRE------IDFLFASPETQWTVK 261

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +  +  +P      SDH PV+  L +
Sbjct: 262 TVDVIDEPL----ASDHRPVMAVLQL 283


>gi|256395293|ref|YP_003116857.1| endonuclease/exonuclease/phosphatase [Catenulispora acidiphila DSM
           44928]
 gi|256361519|gb|ACU75016.1| Endonuclease/exonuclease/phosphatase [Catenulispora acidiphila DSM
           44928]
          Length = 252

 Score = 50.6 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/271 (14%), Positives = 73/271 (26%), Gaps = 30/271 (11%)

Query: 1   MSVVTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQETKTED--KNFPFETLQSL 53
           M  + V + N   +     R R+  LA  + +++ D++CLQE             T  S 
Sbjct: 1   MPKIRVLSLNT--LYKDKPRVRLRALAEVLADSDYDVVCLQELSLPPSFGLIRSLTKTSF 58

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
            Y        +  G  +     P+    +            +     +      +   + 
Sbjct: 59  PYAAHGTRLPTVAGGLLTLSRVPLVGHRYHVVAAPAKWRADVVMRRGVLVARFAVDGEFF 118

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
                +T+T                ++  + E   +      I                 
Sbjct: 119 T----VTNTHLSPNHETDWSQAAPFTRVQQAELARMAQAIRRIDSGEPVIAVGDFNVPRD 174

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
            +  E  Q+   L++    DA             WD          G  +D I++SP   
Sbjct: 175 SWLFEGFQAASGLRDAFDGDAATTFRPVPG----WD----------GAALDQILVSPGVP 220

Query: 234 SLLHSARIDTKPRG---WTKPSDHTPVIVSL 261
           +       +    G       SDH  V  ++
Sbjct: 221 AKAEVVMQEKVRMGDGQDRYLSDHYGVAATI 251


>gi|224047139|ref|XP_002192582.1| PREDICTED: LOC90806 protein [Taeniopygia guttata]
          Length = 560

 Score = 50.6 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 35/108 (32%), Gaps = 5/108 (4%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73
           R  N+   IKE + D++CLQE   ++ ++  E    L+SL YH E   +           
Sbjct: 214 RFPNILQEIKELDADVLCLQEV--QEDHYRTEIKSSLESLGYHCEYKMRTGRKPDGCAIC 271

Query: 74  YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           ++  +            +              L +   +    N    
Sbjct: 272 FKTSKFSLISSNPVEFFRRDIPLLDRDNVGLVLLLQPRFHCKANAAIC 319


>gi|218780993|ref|YP_002432311.1| endonuclease/exonuclease/phosphatase [Desulfatibacillum
           alkenivorans AK-01]
 gi|218762377|gb|ACL04843.1| Endonuclease/exonuclease/phosphatase [Desulfatibacillum
           alkenivorans AK-01]
          Length = 250

 Score = 50.6 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/252 (13%), Positives = 63/252 (25%), Gaps = 34/252 (13%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPF-----ETLQSLNYHIETCGQKSYNGVAIL 71
           R        +   PDI+ +QE    D          E      +          N +   
Sbjct: 26  RKDAFMKLFRTYKPDILAVQE--ANDFQAEHLIQRMEDYDHAGFRKNAPDFWQSNILFFK 83

Query: 72  SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWI 131
             +   +       D  D ++++ ++ +      +++                       
Sbjct: 84  KPWSLKKHRHIFYSDTPDEESKWKDSKWPRQGTLVQLEKGGKTLA--------------- 128

Query: 132 KRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191
                      + E     A     I +      P +   D     +     +  Q    
Sbjct: 129 ---CVDTHYDFKPEVQARSARLLLNILEDFAPGLPTLVMGDFNAKPDSSCRKEFEQGGFK 185

Query: 192 TDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP 251
               +    THH ++          K+ G RID I+       +  S +I     G   P
Sbjct: 186 DPFDKRFGGTHHGFT---------GKDDGRRIDWILYRGGIEPVKASRKIIRGRFGGVYP 236

Query: 252 SDHTPVIVSLDI 263
           SDH  V      
Sbjct: 237 SDHFQVYCEFTW 248


>gi|290963099|ref|YP_003494281.1| hypothetical protein SCAB_88221 [Streptomyces scabiei 87.22]
 gi|260652625|emb|CBG75758.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
          Length = 332

 Score = 50.6 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 26/81 (32%), Gaps = 17/81 (20%)

Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP-- 251
            I  T      Y+        +   +G  IDH++++    +    + I  +         
Sbjct: 259 PIEHTIPNEARYT-------LFHHGRGQMIDHMLVTRNLLAHYRGSEIHNEILHDDSIAF 311

Query: 252 --------SDHTPVIVSLDIP 264
                   SDH PV+ + D  
Sbjct: 312 ATDVKYPESDHAPVVATFDFD 332



 Score = 38.2 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 11/53 (20%)

Query: 1  MSVVTVATWNV-N----------SIRARIHNLAAWIKENNPDIICLQETKTED 42
          M+ + +AT+N+ N          S+  RI  +   I     DI C QE   ++
Sbjct: 1  MAQIRIATFNLENFDEPAPEDPPSLADRIALMKPQITRLRADIACFQEVHGQE 53


>gi|147771141|emb|CAN74183.1| hypothetical protein VITISV_034261 [Vitis vinifera]
          Length = 1201

 Score = 50.6 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/240 (10%), Positives = 69/240 (28%), Gaps = 28/240 (11%)

Query: 21  LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80
           + + ++++ PD++CLQETK ++                       + V            
Sbjct: 3   IKSMVRKHKPDLVCLQETKMKE---------------------MSDRVVKSVGIGRNLGW 41

Query: 81  THLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQ 140
             L           +     +      +G+  +          +    S +    +   +
Sbjct: 42  VSLDARGXAGGVLVMWDKRVLEGLEFEVGSFSISCRFRNCEEGFVWVFSGLYGPSKGRER 101

Query: 141 RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHD 200
           R   EE     G +N        +N + +  +     ++  + ++  +      +     
Sbjct: 102 RELWEELAAIKGLWNDPWCIAXDFNVVRFPAETSNGRQMSTAMREFSSFIDEFELVDPXL 161

Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
               +++      +        +D  + S +    +  A    +       SDH P+++ 
Sbjct: 162 GGGAFTWIGGEGGALKAX----LDRFLFSGDWEERVTGAM---QCLLTRPVSDHCPILLD 214


>gi|167772884|ref|ZP_02444937.1| hypothetical protein ANACOL_04272 [Anaerotruncus colihominis DSM
           17241]
 gi|167664817|gb|EDS08947.1| hypothetical protein ANACOL_04272 [Anaerotruncus colihominis DSM
           17241]
          Length = 300

 Score = 50.6 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/274 (13%), Positives = 80/274 (29%), Gaps = 21/274 (7%)

Query: 2   SVVTVATWNV---NSI---RA-----RIHNLAAWIKENNPDIICLQETKTEDKNFPFETL 50
           +++ V ++N+     I   R+     R    A +I+E+   I+ +QE    +       L
Sbjct: 30  NLIRVVSFNLKRDFGIALNRSHKWGQRRALAAQFIRESGATIVGVQEL-LPNMRDDVSRL 88

Query: 51  QSLNYHI--ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL-R 107
             ++Y +        +       S          +        ++  E           R
Sbjct: 89  LDVDYSVLGFGRFSGAKPNSDEHSDIIIKNDNASVRLIKTFWLSKSPERLSRAYFAVFPR 148

Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167
           I  +   +   +         +     +   ++ L +   L +   +N            
Sbjct: 149 ICTVAEVYLTKLDRCV--RVFNTHLDHICGIARTLGIRVILDYMRSFNEERPMPTILMGD 206

Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227
                    + + ++            +      H   +  ++        +   ID+I 
Sbjct: 207 FNAKPTSRPVRLLRACSDEYPQLHLTDVYTRFPAHINNTLHNFSGRVRPGAQP--IDYIF 264

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           +S E    +  A I T P     PSDH P+  +L
Sbjct: 265 VSDEFE--IVEAHIMTDPVDGHYPSDHYPLEATL 296


>gi|323488215|ref|ZP_08093465.1| Endonuclease/exonuclease/phosphatase [Planococcus donghaensis
           MPA1U2]
 gi|323398073|gb|EGA90869.1| Endonuclease/exonuclease/phosphatase [Planococcus donghaensis
           MPA1U2]
          Length = 279

 Score = 50.6 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/294 (13%), Positives = 82/294 (27%), Gaps = 39/294 (13%)

Query: 3   VVTVATWNV-NSIRARIHNLAAW------IKENNPDIICLQETKTEDKNFP--FETLQSL 53
           +V V ++N+ + +   +  +         I+++   II LQE    D++F      +  +
Sbjct: 10  IVKVMSFNIAHGLG--MDGVVDLEKTAQVIEDSCATIIALQEV---DRHFSVRSSFVDQV 64

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
            +  E  G  +  G  +       E      G+ +  +         + TQ         
Sbjct: 65  GWLSERLGMYAAYGANMDVTPLDSERPNQQYGNVILSKYPIKYNENHLLTQVYCPFGNNE 124

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
             G   T  + D     +                            P             
Sbjct: 125 QRGILETVIEVDGSYVSVFNTHLALKDEELEVSVDEILAITGKSHFPRII---------T 175

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG------IRIDHIM 227
                   +    +                 Y++   Y +   K  G       RID+I 
Sbjct: 176 GDFNAPASNVHIQKLKRHFRDAFLKMKRGDAYTYPSPYVN---KETGEVFRPATRIDYIF 232

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
             P    ++ +A I+T        SDH P+ V + + + +   Q  T +    +
Sbjct: 233 ADPYL-DVVQAAVIETAV------SDHLPIAVDMVLSDAKVNDQVYTRKARVTV 279


>gi|281354345|gb|EFB29929.1| hypothetical protein PANDA_014987 [Ailuropoda melanoleuca]
          Length = 286

 Score = 50.6 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 52/186 (27%), Gaps = 18/186 (9%)

Query: 96  EATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYN 155
                     + +          I +    ++ +           +  +++  +  GD N
Sbjct: 10  AIERDTEGHYIILKGSIQQVDMTIINIYAPNRGAARYTSQLLTKIKRHIDKNTVIVGDLN 69

Query: 156 IIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW 215
                 D               E +     L  +   D  R  H     YSF+     ++
Sbjct: 70  TPLSEIDRTPWQKLSK------ESKALNAILDELDLIDIYRTLHPRTKEYSFYSNAHGTF 123

Query: 216 SKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTS 275
           S     RIDH +      S      I          SDH  + + L+     K  ++S +
Sbjct: 124 S-----RIDHALGHKTGLSQYQKIEIIPCI-----FSDHNALKLELN--HKEKPGRNSNT 171

Query: 276 QNMKPI 281
             ++ I
Sbjct: 172 WRLRTI 177


>gi|329922986|ref|ZP_08278502.1| endonuclease/exonuclease/phosphatase family protein [Paenibacillus
           sp. HGF5]
 gi|328941759|gb|EGG38044.1| endonuclease/exonuclease/phosphatase family protein [Paenibacillus
           sp. HGF5]
          Length = 494

 Score = 50.6 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/287 (12%), Positives = 78/287 (27%), Gaps = 30/287 (10%)

Query: 4   VTVATWNVNSIRARIHNLAAW----------IKENNPDIICLQETKTEDKNFPFETLQSL 53
           + V ++N   +R   ++   W          I E+ PD+I  QE     +          
Sbjct: 38  LKVMSFN---LRYAANDGQPWENRRPVTRNLILEHQPDVIGTQE--GLHRQIVDLENDLP 92

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
            Y     G++  +    ++ +   E +  L      +       +       +     ++
Sbjct: 93  GYDRIGVGREGGSLGEYMAIFYNTERLKPLEQSHFWLSDTPQTISSASWGNQIPRMATWV 152

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
              +      +      +   L   S+    +   +                   +    
Sbjct: 153 RFQDLRNGKTF----YMVNTHLDHQSEVSRQKSAALIVDKMKSFDPEIPVVITGDFNTLP 208

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
                   +   L +   T   R   D    +++ D          G RID I+      
Sbjct: 209 ASDTYSIFTNNGLSDAHVTAKKRTNDDLGTFHNYKDPTGGG----SGNRIDWILHGQGW- 263

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
             +  + I         PSDH PV++         +Q + T+    P
Sbjct: 264 -NVLHSEIINYKEDDQYPSDHYPVMME-----GTLQQSNKTTGETVP 304


>gi|321445374|gb|EFX60676.1| hypothetical protein DAPPUDRAFT_123357 [Daphnia pulex]
          Length = 359

 Score = 50.6 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/275 (12%), Positives = 77/275 (28%), Gaps = 33/275 (12%)

Query: 3   VVTVATWNVNSIR--ARIHNLA----AWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56
            + + T+N+  +R   ++  +       I+ N   +I  QET     +      +  +  
Sbjct: 26  TIQIRTYNIRGLRCNLKLKRVLNTCHKIIQNNPFAVIGFQETHLTKDDVQSLKFKWRHGF 85

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
           +   G     GV +L       + + +  D         +   T     +          
Sbjct: 86  VLAPGTNRQCGVLLLYGDAWTHLTSEVDTDGQRASVVLAKGANTFIFNCIYAP------- 138

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
                   +D        +           P      +       +  + +  +      
Sbjct: 139 --------NDHSIDFFANIYDKLAEQIANYPEAVLNIFGDFNVALEGIDGVNRQKTTSEA 190

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
              +   +  + +   D  RA + +   +++            G R+D I  +      +
Sbjct: 191 NASKLIIENNKILNLIDTFRAINPSGG-FTW--VRDKC-----GSRLDMIFSAKCDFVKI 242

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271
             + ID         SDH  V+  L+I E  K+  
Sbjct: 243 KQSSID----WTFDDSDHAMVLTELEILECTKRGP 273


>gi|297835128|ref|XP_002885446.1| endonuclease/exonuclease/phosphatase family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297331286|gb|EFH61705.1| endonuclease/exonuclease/phosphatase family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 460

 Score = 50.6 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 45/270 (16%), Positives = 82/270 (30%), Gaps = 25/270 (9%)

Query: 12  NSIRARIHNLAAWIKENNPDIICLQETKTEDKNF--PFETLQ-SLNY-HIETCGQKSYNG 67
           N   +R  ++A  ++E + DI+ LQ+ K E++    P   L  +L   ++         G
Sbjct: 173 NGYSSR-RSIAELLRELDADILALQDVKAEEETLMKPLSDLASALGMKYVFAESWAPEYG 231

Query: 68  VAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDK 127
            AILSK+   +       D  D +              + +    L H +     K  D 
Sbjct: 232 NAILSKWPIKKWRVQRIADVDDFRNVLKVTVEVPWAGDVNVYCTQLDHLDENWRMKQIDA 291

Query: 128 ISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQ 187
           I+            L   +   ++                         +EV +  +   
Sbjct: 292 ITRGDESPHILLGGLNSLDGSDYSI---ARWNHILKVKYYEDSGKPTPRVEVMRFLKGKG 348

Query: 188 NMGFTDAIRATHDTHHLYSFWDYYADSWSKN------KGIRIDHIMLSPEATSLLHSARI 241
            +   +          +         +  +N       G R+D+I+ SPE+         
Sbjct: 349 YLDSKEFAGECEPVVII---------AKGQNVQGTCKYGTRVDYILASPESPYEFVPGS- 398

Query: 242 DTKPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271
                     SDH  V V L I + R +  
Sbjct: 399 -YSVVSSKGTSDHHIVKVDLVITKERSRGS 427


>gi|326789876|ref|YP_004307697.1| endonuclease/exonuclease/phosphatase [Clostridium lentocellum DSM
           5427]
 gi|326540640|gb|ADZ82499.1| Endonuclease/exonuclease/phosphatase [Clostridium lentocellum DSM
           5427]
          Length = 263

 Score = 50.6 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 49/271 (18%), Positives = 90/271 (33%), Gaps = 19/271 (7%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET--KTEDKNFPFETLQSLNYH 56
           + + T N +S +      +I+ LA  IKEN+ D+I LQE       K F    L++ NY 
Sbjct: 1   MKLLTLNCHSWQEDHQLDKINYLAKTIKENDYDVIALQEVSQHMLGKQF-KGQLKTDNYV 59

Query: 57  I---ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
           +   E   +   N   ++  +  I    +  G  L  +   IE      +QT    N   
Sbjct: 60  VVLQEALQKLGVNHYEVVWDFAHIGFQVYEEGLCLLSKHPIIEEESFFVSQTKDTLNWKS 119

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
                 T     ++I      L +     E  +  +   +  + P+           N  
Sbjct: 120 RRIVKATINYKGEEIDCYSCHLGWWEDEEEPAKLQLNKLNAKLHPKRRAFLLGDFNNNAN 179

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK-GIRIDHIMLSPEA 232
                            +  A    +               W +N  G+R+D+I  + + 
Sbjct: 180 VRDKGYDYMLGLGWKDTYMLAKDKDNGVTVQ-----GKIHGWEENAGGLRLDYIFTNQKV 234

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              + S+++          SDH  V V +++
Sbjct: 235 E--VRSSKVIFNGSNKAVISDHHGVQVEIEL 263


>gi|169832807|ref|YP_001695419.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae Hungary19A-6]
 gi|168995309|gb|ACA35921.1| endonuclease/exonuclease/phosphatase family [Streptococcus
           pneumoniae Hungary19A-6]
          Length = 284

 Score = 50.6 bits (119), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/285 (14%), Positives = 88/285 (30%), Gaps = 23/285 (8%)

Query: 1   MSVVTVATWNVN-------SIRARIHNLAAWIKENNPDIICLQE-TKTEDKNFPFETLQS 52
           M  +TV+TWN+N         +     +   + + N DI+CL E  K ++ +   E L+S
Sbjct: 1   MKKMTVSTWNINQRSGTGKG-KQIPEMIVHELAKQNSDIVCLTEYVKGKNHSEFCEQLKS 59

Query: 53  LNY--HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
           L Y   +     K +    +++       +  +     +    F+          L I  
Sbjct: 60  LGYSLFMYPEHIKKFQNEVLIAIKTKFVTLPRITTFPEEEFPDFLHLQIDFEGAPLHIIG 119

Query: 111 LYLPHGNPITSTKY---------DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161
             +   +   +  Y         D K   ++        R      L+     N     H
Sbjct: 120 ARIKIADIDDTLPYKRKLPLLVKDAKERLLQIEYITEYVRKLNGNILLMGDFNNFHYFEH 179

Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI 221
              +    + +                         T +   +YS+ +    + +  + I
Sbjct: 180 QKIDSWEHDKEFLQNYYSYPLLVAKMTEVNLATYSPTGNYDEVYSWINPGTRADNIKRYI 239

Query: 222 RIDHIMLSPEATSLLHSAR---IDTKPRGWTKPSDHTPVIVSLDI 263
           R DH+  +    S +  +     + K +      DH  +  ++ +
Sbjct: 240 RNDHLFSNLTEISDIKYSWEFTKNPKYQNKVGFPDHAILSATISL 284


>gi|315445296|ref|YP_004078175.1| metal-dependent hydrolase [Mycobacterium sp. Spyr1]
 gi|315263599|gb|ADU00341.1| metal-dependent hydrolase [Mycobacterium sp. Spyr1]
          Length = 263

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/272 (11%), Positives = 71/272 (26%), Gaps = 33/272 (12%)

Query: 4   VTVATWNVNSIRAR-------IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56
           + + T+N+  +  R       +      +   + DI+ LQE  +         L +L   
Sbjct: 1   MKLVTFNI--LHGRTPGAEVDLDRFVDCVAGLDADILALQEVDSIQARSGLADLTALAAE 58

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL-RIGNLYLPH 115
                   +      +        T             + + +   +  + R+  +  P 
Sbjct: 59  AMGARSHRFVAAIAGTPGATWMAATGEEQPGTAAYGVALLSRYPAVSWQVARLPRIPFPF 118

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
              +   +    +    R          L E  +     + +P  +      +  +    
Sbjct: 119 PLYLREPRKVVVVHEEPRAAVIGRFDTPLGELTVANTHLSFVPGWNRYQLHHLMRDVRGL 178

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR-IDHIMLSPEATS 234
                 +                H      +        +  ++  R +DH++    A  
Sbjct: 179 PSPWIVTGDLNMPAKPARRWSRLHCLASAPT--------FPADRPTRQLDHVLTDEPAF- 229

Query: 235 LLHSARIDTKPRGWTKP----SDHTPVIVSLD 262
                      R +  P    SDH P++V L+
Sbjct: 230 ---------TIRSYDTPEMAISDHRPLVVDLE 252


>gi|319939609|ref|ZP_08013968.1| LPXTG cell wall surface protein [Streptococcus anginosus 1_2_62CV]
 gi|319811198|gb|EFW07504.1| LPXTG cell wall surface protein [Streptococcus anginosus 1_2_62CV]
          Length = 736

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/90 (21%), Positives = 32/90 (35%), Gaps = 10/90 (11%)

Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT---K 250
            +   HD    YS++ Y   + S      +D+I +S         + +           +
Sbjct: 604 NMMLNHDAADRYSYF-YRGSNQS------LDNIFVSKNIADKTVFSPVHINASFMEEHGR 656

Query: 251 PSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
            SDH PVI  LD  + +     +     KP
Sbjct: 657 ASDHDPVIAQLDFSQKKDDTTPTQPTEPKP 686


>gi|74007512|ref|XP_848633.1| PREDICTED: similar to LINE-1 reverse transcriptase homolog [Canis
           familiaris]
          Length = 682

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 35/93 (37%), Gaps = 12/93 (12%)

Query: 189 MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGW 248
           M FTD  R  H     Y+F+     ++      RIDHI+      +      I       
Sbjct: 1   MDFTDIYRTLHPNSTEYTFFSSAHGTFP-----RIDHILGHKSGLNRNQKIGIVPCI--- 52

Query: 249 TKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
              SDH  + + L+    +K  + S +  +K I
Sbjct: 53  --FSDHNALKLELN--HNKKFGRTSNTWRLKTI 81


>gi|281354022|gb|EFB29606.1| hypothetical protein PANDA_013694 [Ailuropoda melanoleuca]
          Length = 324

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 52/186 (27%), Gaps = 18/186 (9%)

Query: 96  EATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYN 155
                     + +          I +    ++ +           +  +++  +  GD N
Sbjct: 48  AIERDTEGHYIILKGSIQQVDMTIINIYAPNRGAARYTSQLLTKIKRHIDKNTVIVGDLN 107

Query: 156 IIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW 215
                 D               E +     L  +   D  R  H     YSF+     ++
Sbjct: 108 TPLSEIDRTPWQKLSK------ESKALNAILDELDLIDIYRTLHPRTKEYSFYSNAHGTF 161

Query: 216 SKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTS 275
           S     RIDH +      S      I          SDH  + + L+     K  ++S +
Sbjct: 162 S-----RIDHALGHKTGLSQYQKIEIIPCI-----FSDHNALKLELN--HKEKPGRNSNT 209

Query: 276 QNMKPI 281
             ++ I
Sbjct: 210 WRLRTI 215


>gi|74821373|sp|Q95SX7|RTBS_DROME RecName: Full=Probable RNA-directed DNA polymerase from transposon
           BS; AltName: Full=Reverse transcriptase
 gi|16648424|gb|AAL25477.1| LD46618p [Drosophila melanogaster]
          Length = 906

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 38/273 (13%), Positives = 70/273 (25%), Gaps = 40/273 (14%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           M+ + +  WN N I  +  ++  +      DI+ + E + +      ET++   Y     
Sbjct: 1   MNPLKILIWNANGISRKAKDVELFAHNKKVDILLVTELRLKRG----ETVKIYGYAYYPA 56

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            + S N  ++            +          F +         L    +    G+   
Sbjct: 57  YRPSLNNNSVG----------GVAVFVRTTLRHFPQRVIETRHIQLSSVKVATGLGDLQF 106

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
           S  Y    S       F        +  +  GD+N                +    L V 
Sbjct: 107 SAIY-CSPSTRIEERHFTDIIRACGQRYLVGGDWNARHWLWGDTCNSPRGRELAEALSVT 165

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            +               +H                       ID   +       L  A 
Sbjct: 166 GAKILATGSPTRYPYVPSHTPSC-------------------ID-FAVYHGIPDHL--AT 203

Query: 241 IDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDS 273
           I    + W   SDH P+I+S++           
Sbjct: 204 I---TQSWDLDSDHLPLIISIETDSTHVNPSPR 233


>gi|11323019|emb|CAC16871.1| pol [Drosophila melanogaster]
          Length = 1227

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 38/274 (13%), Positives = 68/274 (24%), Gaps = 51/274 (18%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETK--TEDKNF--PFETLQSLNYHIE 58
            +T+  WN++ I    + L   IK++ PDI+ LQETK      NF  P E      Y   
Sbjct: 2   TITILQWNIHGIFNNYNELTLLIKDHAPDIVFLQETKLPCNSTNFICPKE---YSGYFHN 58

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
                S      +   + +          +   A  +     IN     I    +   + 
Sbjct: 59  FSYNTSAKQGIGVLIKRNVPHTYRNINSSILCSALQLNFEQVINIVNAYIPPSQIFSSSD 118

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
           I+    +             S       P        I     +    ++ +        
Sbjct: 119 ISEILQN-LNGSTILLGDLNSWSPLWGSPRTNTRGKKIETVILENSLIVLNDGSPTHLST 177

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
                                                       ID  ++SP+   +   
Sbjct: 178 HNTFTH--------------------------------------IDISLISPQIAHMCSW 199

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQD 272
           +            SDH P+ + ++ P        
Sbjct: 200 S-----ISDNLHGSDHFPITIHINTPTRPDNTLP 228


>gi|124087428|ref|XP_001346851.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|145474943|ref|XP_001423494.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|50057240|emb|CAH03224.1| Conserved hypothetical protein with homology to transcriptional
           regulator [Paramecium tetraurelia]
 gi|124390554|emb|CAK56096.1| unnamed protein product [Paramecium tetraurelia]
          Length = 326

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 42/267 (15%), Positives = 83/267 (31%), Gaps = 28/267 (10%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAI------ 70
           R   +   +K  N DI CLQE   ++ +F  E ++ LNY I    +       +      
Sbjct: 64  RSTKIIEQLKIFNVDIFCLQEV--DNIDFYQERIKKLNYEICFVQRPQRPDGCLIAFKVD 121

Query: 71  ---------LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
                     S  +                 + +     +  + L IGN++         
Sbjct: 122 KFKLLKSSEYSLDKMAINYGLPLQYQRQNVFQIVILEHILTKKQLVIGNIHTFWNPNQDD 181

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            KY   +  +++           ++ LIF GD N +P  +        +       +   
Sbjct: 182 LKYFQIVQLVQKMEAEKE---SDDQILIFCGDLNSLPHSNPIQYIQKNKPIVERIEKSSN 238

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL----H 237
             +  + +         +     Y  +  + +  +  KG  ID+I         +     
Sbjct: 239 QIKLQKEIFEHYGPPKLNWQS-AYHPFPKFTNYTTDFKGC-IDYIFYHNANVEKILRLPE 296

Query: 238 SARIDTKP--RGWTKPSDHTPVIVSLD 262
            + +  +        PSDH P++ S D
Sbjct: 297 ESVLQQEVALPNRNFPSDHLPILASFD 323


>gi|262395406|ref|YP_003287259.1| metal-dependent hydrolase [Vibrio sp. Ex25]
 gi|262339000|gb|ACY52794.1| metal-dependent hydrolase [Vibrio sp. Ex25]
          Length = 288

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 43/288 (14%), Positives = 83/288 (28%), Gaps = 46/288 (15%)

Query: 2   SVVTVATWNV-----NSIRARIH-----NLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51
           + + + +WN+     N  +          L  ++ +   DII  QE    D     +   
Sbjct: 20  NSINLTSWNIEWLSINGGKVSRTSDDFIKLNQYVDKTQADIIAFQEV---DSKAAVQKAV 76

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
              Y I    +   N      ++      T          +   + + T +   LR  + 
Sbjct: 77  GDGYAIYLSDRAQSNN--KHLQFSDTNQYTGFAVRKDIEVSDPADFSITRSNSKLRFASY 134

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
            + + N                   + + R             +   +    +     + 
Sbjct: 135 IVVNPNQKDELHLLSVHLKAGCSGAYKNNRN--------CQTLSQQGEALAKWMSEREKK 186

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIR-------- 222
              + +    +        +  AI    +   L +  D  AD   + NK  R        
Sbjct: 187 KQQYAVMGDFNHNLSYQRDWLWAIMTLGNDAQLVTR-DTKADCKVRSNKNPRKTHQFRSL 245

Query: 223 IDHIMLSPEATSL------LHSARIDTKPRGWTKPSDHTPV--IVSLD 262
           IDHI++SP+  +         S  +        K SDH PV   V+L+
Sbjct: 246 IDHIIVSPQIKAKNAHQTLFSSQDVLDY-----KLSDHCPVNATVTLN 288


>gi|222111827|ref|YP_002554091.1| endonuclease/exonuclease/phosphatase [Acidovorax ebreus TPSY]
 gi|221731271|gb|ACM34091.1| Endonuclease/exonuclease/phosphatase [Acidovorax ebreus TPSY]
          Length = 291

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 40/300 (13%), Positives = 73/300 (24%), Gaps = 52/300 (17%)

Query: 4   VTVATWN---VNSIRARIH--NLAAWIKEN-NPDIICLQETKT-----------EDKNFP 46
           + + TWN      +  R+    +  +     + D++CLQE              +     
Sbjct: 1   MQLVTWNTQWCRGLDGRVDPARIVQYAVALGDVDVLCLQEIAVNYPGLAGSPGDQVAQVQ 60

Query: 47  FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
                   + +           A   +     I T LP   L            + +   
Sbjct: 61  SAL--PAGWQVFFGAAVDE-WTAAGRQRFGNLIATRLPVLQLQHHPLPYPPDAGVRSMPR 117

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
               L +              + +  +  R A         L         PQ     +P
Sbjct: 118 LCSVLTVQDPALGPVRVMTTHLEYYSKPQRMAQALALRALHLQACAQAAQRPQGLADGSP 177

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI--- 223
              +      +       +     +     A  D     +        W      R+   
Sbjct: 178 FQPKAHTPHAVLCGDFNLQAHEPEYAMLAAALADEEGATAGQAGQPPLWDA---WRLLHP 234

Query: 224 ----------------------DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
                                 D I +S    S + + R+D    G T+ SDH PV++ L
Sbjct: 235 GAPQPPTFCVFDQTYAPQPLACDFIWVSDSLRSRVRAVRVD----GVTQASDHQPVLLEL 290


>gi|323305214|gb|EGA58961.1| Isc1p [Saccharomyces cerevisiae FostersB]
          Length = 471

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/268 (13%), Positives = 77/268 (28%), Gaps = 19/268 (7%)

Query: 26  KENNPDIICLQETKTEDK--NFPFETLQSLNYH-IETCGQKSYNGVAILSKYQPIEIVTH 82
           +  + D+I LQE    +              Y  +   G  +  G+AILSK        +
Sbjct: 83  ENEDYDVIALQEIWCVEDWKYLASACASKYPYQRLFHSGILTGPGLAILSKVPIESTFLY 142

Query: 83  LPGDDLDVQARFIEATFTINTQTLRI------------GNLYLPHGNPITSTKYDDKISW 130
               +    A F    +   +  + +             +++ P+     +     +   
Sbjct: 143 RFPINGRPSAVFRGDWYVGKSIAITVLNTGTRPIAIMNSHMHAPYAKQGDAAYLCHRSCQ 202

Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG 190
              F R      +    +I  GD N  P                   ++           
Sbjct: 203 AWDFSRLIKLYRQAGYAVIVVGDLNSRPGSLPHKFLTQEAGLVDSWEQLHGKQDLAVIAR 262

Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR---G 247
            +   +         S  + +      ++  R+D+ ++ P+    +  A +    R    
Sbjct: 263 LSPLQQLLKGCTTCDSLLNTWRAQRQPDEACRLDYALIDPDFLQTV-DAGVRFTERIPHL 321

Query: 248 WTKPSDHTPVIVSLDIPEPRKKQQDSTS 275
               SDH     +L+I     + + STS
Sbjct: 322 DCSVSDHFAYSCTLNIVPQGTESRPSTS 349


>gi|114608807|ref|XP_001151885.1| PREDICTED: sphingomyelin phosphodiesterase 2, neutral membrane
           (neutral sphingomyelinase) isoform 2 [Pan troglodytes]
 gi|114608809|ref|XP_001152001.1| PREDICTED: sphingomyelin phosphodiesterase 2, neutral membrane
           (neutral sphingomyelinase) isoform 3 [Pan troglodytes]
          Length = 423

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 42/297 (14%), Positives = 89/297 (29%), Gaps = 37/297 (12%)

Query: 4   VTVATWNVNSI------RA-RIHNLAAWIKENNPDIICLQETKT-EDKNFPFETLQS-LN 54
           + +   N   I      RA R+  L  ++ + + D+  L+E  + +D  +  + L     
Sbjct: 9   LRIFNLNCWGIPYLSKHRANRMRRLGDFLNQESFDLALLEEVWSEQDFQYLRQKLSPTYP 68

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN---- 110
                      +G+ + SK+   E+  H+   +           F+     L + +    
Sbjct: 69  AAHHFRSGIIGSGLCVFSKHPIQELTQHIYTLNGYPYMIHHGDWFSGKAVGLLVLHLSGM 128

Query: 111 -------LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                        N         +++      +F     +  + ++  GD N+ P+   C
Sbjct: 129 VLNAYVTHLHAEYNRRKDIYLAHRVAQAWELAQFIHHTSKKADVVLLCGDLNMHPEDLGC 188

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223
                W       LE R      +                                G+RI
Sbjct: 189 CLLKEWTGLHDAYLETRDFKGSEEGNTMVPKNCYVSQQEL-----------KPFPFGVRI 237

Query: 224 DHIMLSPEATSLLHSARIDT-----KPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTS 275
           D+++     +    S +         P   T  SDH  ++ +L +     +Q  S++
Sbjct: 238 DYVLY-KAVSGFYISCKSLETTTGFDPHSGTPLSDHEALMATLFVRHSPPQQNPSST 293


>gi|151944728|gb|EDN62987.1| Inositol phosphosphingolipid phospholipase C [Saccharomyces
           cerevisiae YJM789]
          Length = 471

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/268 (13%), Positives = 77/268 (28%), Gaps = 19/268 (7%)

Query: 26  KENNPDIICLQETKTEDK--NFPFETLQSLNYH-IETCGQKSYNGVAILSKYQPIEIVTH 82
           +  + D+I LQE    +              Y  +   G  +  G+AILSK        +
Sbjct: 83  ENEDYDVIALQEIWCVEDWKYLASACASKYPYQRLFHSGILTGPGLAILSKVPIESTFLY 142

Query: 83  LPGDDLDVQARFIEATFTINTQTLRI------------GNLYLPHGNPITSTKYDDKISW 130
               +    A F    +   +  + +             +++ P+     +     +   
Sbjct: 143 RFPINGRPSAVFRGDWYVGKSIAITVLNTGTRPIAIMNSHMHAPYAKQGDAAYLCHRSCQ 202

Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG 190
              F R      +    +I  GD N  P                   ++           
Sbjct: 203 AWDFSRLIKLYRQAGYAVIVVGDLNSRPGSLPHKFLTQEAGLVDSWEQLHGKQDLAVIAR 262

Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR---G 247
            +   +         S  + +      ++  R+D+ ++ P+    +  A +    R    
Sbjct: 263 LSPLQQLLKGCTTCDSLLNTWRAQRQPDEACRLDYALIDPDFLQTV-DAGVRFTERIPHL 321

Query: 248 WTKPSDHTPVIVSLDIPEPRKKQQDSTS 275
               SDH     +L+I     + + STS
Sbjct: 322 DCSVSDHFAYSCTLNIVPQGTESRPSTS 349


>gi|190405580|gb|EDV08847.1| inositol phosphosphingolipids phospholipase C [Saccharomyces
           cerevisiae RM11-1a]
 gi|256273772|gb|EEU08697.1| Isc1p [Saccharomyces cerevisiae JAY291]
 gi|259145925|emb|CAY79185.1| Isc1p [Saccharomyces cerevisiae EC1118]
 gi|323333910|gb|EGA75299.1| Isc1p [Saccharomyces cerevisiae AWRI796]
 gi|323337923|gb|EGA79162.1| Isc1p [Saccharomyces cerevisiae Vin13]
 gi|323348959|gb|EGA83195.1| Isc1p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 477

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/268 (13%), Positives = 77/268 (28%), Gaps = 19/268 (7%)

Query: 26  KENNPDIICLQETKTEDK--NFPFETLQSLNYH-IETCGQKSYNGVAILSKYQPIEIVTH 82
           +  + D+I LQE    +              Y  +   G  +  G+AILSK        +
Sbjct: 89  ENEDYDVIALQEIWCVEDWKYLASACASKYPYQRLFHSGILTGPGLAILSKVPIESTFLY 148

Query: 83  LPGDDLDVQARFIEATFTINTQTLRI------------GNLYLPHGNPITSTKYDDKISW 130
               +    A F    +   +  + +             +++ P+     +     +   
Sbjct: 149 RFPINGRPSAVFRGDWYVGKSIAITVLNTGTRPIAIMNSHMHAPYAKQGDAAYLCHRSCQ 208

Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG 190
              F R      +    +I  GD N  P                   ++           
Sbjct: 209 AWDFSRLIKLYRQAGYAVIVVGDLNSRPGSLPHKFLTQEAGLVDSWEQLHGKQDLAVIAR 268

Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR---G 247
            +   +         S  + +      ++  R+D+ ++ P+    +  A +    R    
Sbjct: 269 LSPLQQLLKGCTTCDSLLNTWRAQRQPDEACRLDYALIDPDFLQTV-DAGVRFTERIPHL 327

Query: 248 WTKPSDHTPVIVSLDIPEPRKKQQDSTS 275
               SDH     +L+I     + + STS
Sbjct: 328 DCSVSDHFAYSCTLNIVPQGTESRPSTS 355


>gi|327193878|gb|EGE60754.1| putative endonuclease/exonuclease/phosphatase family protein
           [Rhizobium etli CNPAF512]
          Length = 369

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 45/112 (40%), Gaps = 24/112 (21%)

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT- 233
              E   +     + GF + + A       ++   Y+A    +    ++D+I LSP    
Sbjct: 260 HQPEAESALDVFSHDGFVENVMARRQPLDRWTL--YHARGPQEQHLCQLDYIWLSPALAT 317

Query: 234 -------SLLHSA-----------RIDTKPR-GWTKP--SDHTPVIVSLDIP 264
                   ++ +             ++  PR GW +P  SDH PV+++LD+P
Sbjct: 318 HNSGRLPEIIRNGQPYRTVFPPGQEVERYPRTGWDRPKASDHCPVVMTLDLP 369


>gi|190346925|gb|EDK39113.2| hypothetical protein PGUG_03211 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 290

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 60/265 (22%), Gaps = 45/265 (16%)

Query: 17  RIHNLAAWIK---ENNPDIICLQE-TKTEDKNF-----PFETLQSLN--------YHIET 59
           R   +   IK     +P I+ LQE  + +  +      P      +         Y    
Sbjct: 53  RKAGVIDSIKNYTSQHPTIVGLQEALRGQLDDIMKGLGPEWKFFGVGGSGDTKGEYCPII 112

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
                +  V   +K+          G     +     A     +    I           
Sbjct: 113 YKSNEWELVNGTTKWLSETPDKPSRGYGSKYERIVTFAELRHVSSGRTIHYFNTHLDPHD 172

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +Y+       R +           P+   GD+N                 A    + 
Sbjct: 173 DHVRYE-----SVRDIITYVNHTRQGSPVFLGGDFNAKRTSAPYKYVATQMTPASIAPDP 227

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML-SPEATSLLHS 238
                  +        +  H                       ID I      +   + S
Sbjct: 228 --KGVDNKEKSTNSGFQFNHPKT--------------------IDFIFFQDHGSKVKVDS 265

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263
             I +   G    SDH+PVI    I
Sbjct: 266 YEILSSTSGNVVISDHSPVIADFSI 290


>gi|88803294|ref|ZP_01118820.1| hypothetical protein PI23P_11917 [Polaribacter irgensii 23-P]
 gi|88780860|gb|EAR12039.1| hypothetical protein PI23P_11917 [Polaribacter irgensii 23-P]
          Length = 336

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 48/275 (17%), Positives = 83/275 (30%), Gaps = 48/275 (17%)

Query: 2   SVVTVATWNV-------------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFE 48
           S + V ++NV             N       N   +I +   DI+ LQE           
Sbjct: 97  SDLKVMSFNVKTFDFFNNKKKVEN-----TKNGFEFIADQALDILVLQEY----YQLKKN 147

Query: 49  TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108
            L     +I+   ++S  G+AI SKY+   I+     D        I A       T+RI
Sbjct: 148 KLPYPYRYIKLRSKRSKYGMAIYSKYK---IINSGSLDLKSTGNNIIFADILKEKDTIRI 204

Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168
            N +             ++ ++ +        R+        +     +          I
Sbjct: 205 YNAHFES-----LKIKPNEENFGEENSEKLIGRVAQAFKRQASQTALFLNHEKQWKGKKI 259

Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
              D   T       +  +N      I A       Y++W      +     +RID I+ 
Sbjct: 260 ICGDFNNTAYSWMYHEISKN-KKDAFIVAGEGFGKSYNYW------FP----LRIDFILT 308

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                     A I+         SDH P+  +++ 
Sbjct: 309 DEA-------AIINQFKTFTEIYSDHFPIRANINW 336


>gi|84625383|ref|YP_452755.1| hypothetical protein XOO_3726 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|84369323|dbj|BAE70481.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 319

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/271 (12%), Positives = 65/271 (23%), Gaps = 26/271 (9%)

Query: 4   VTVATWNV------NS---IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           + V ++NV      +       R  ++ A IK+ +PD+   QE   E   +    L +  
Sbjct: 66  LRVMSFNVRVPMDSDGDKRWTVRRTSMVALIKQAHPDVFGTQELVQEQAQYLASHLPAYR 125

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           +  +       +    +        V       L        ++         +      
Sbjct: 126 WFGKGRRADGSDEHMGVFYDSNALSVIESGDFWLSETPEIPGSSSWNTDLPRMVTWALFE 185

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
             N                  R   +        +       +P          + +D  
Sbjct: 186 RRNDKRRFYL----LNTHLPHRDQDEAAREHVARVILSRIATLPADIPVVVTGDFNSDPD 241

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
                  +             +    T   ++               RID I+     T 
Sbjct: 242 QGTYRTLTAVLGDARAHVAKPQGPEKTFQNFTTQPTR----------RIDWILF-RGLTP 290

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
                       G   PSDH PV+ + + P+
Sbjct: 291 --TRFSTLDARSGGILPSDHYPVLAAFEWPQ 319


>gi|71418503|ref|XP_810873.1| RNA-editing complex protein MP100 [Trypanosoma cruzi strain CL
           Brener]
 gi|70875471|gb|EAN89022.1| RNA-editing complex protein MP100, putative [Trypanosoma cruzi]
          Length = 922

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/292 (11%), Positives = 69/292 (23%), Gaps = 47/292 (16%)

Query: 2   SVVTVATWNV-------------------NSIRARIHNLAAWIKENNPDIICLQETKTED 42
           + + + TWNV                    S + R   LA  I++ + D++ +QE     
Sbjct: 646 TTLKLLTWNVMFDRYSGKPTPLGMPGIDWCSPK-RYPVLARVIQQEDADVVGMQEV---- 700

Query: 43  KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIE-IVTHLPGDDLDVQARFIEATFTI 101
           +   +E L    +  E            +S +  +  +                  T  +
Sbjct: 701 EPVFWEFLSKQPWMRENYYFSCGYTSPSISPWGVLMLVHRRRFPVQSITYLNVPAWTNHV 760

Query: 102 NTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161
           +   +    L     +   +          +         L         GD   +   +
Sbjct: 761 SLMPVVCLQLPHGPVHVAAAHLLAPYTKSHETARTSQDSALRHHMLKTLTGDVVTMGDFN 820

Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI 221
           D              ++              D             F+             
Sbjct: 821 DWPTNEFLMPAESQYVDCWPLIYPHDAGKTMDETNTFCKLKVEEMFFG------------ 868

Query: 222 RID-HIMLSPEATS---------LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           R D   + S               ++    +    G+  PSDH  V ++  +
Sbjct: 869 RSDKLFLRSRRLAPVEGHLVGTKSVNDENGNKDAPGYLFPSDHYGVSMTFAL 920


>gi|115753090|ref|XP_001204165.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus
           purpuratus]
 gi|115927127|ref|XP_788090.2| PREDICTED: hypothetical protein, partial [Strongylocentrotus
           purpuratus]
          Length = 124

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 23/56 (41%), Gaps = 2/56 (3%)

Query: 188 NMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEA-TSLLHSARI 241
           +  F D+ R  H    + ++ W     +   N G RID+I+++       L    I
Sbjct: 67  DNLFVDSFRYFHPKRENAFTCWSTLTGARQTNYGTRIDYIIVNERLSVDELTECDI 122


>gi|227550110|ref|ZP_03980159.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecium TX1330]
 gi|227180754|gb|EEI61726.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecium TX1330]
          Length = 293

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 40/282 (14%), Positives = 74/282 (26%), Gaps = 31/282 (10%)

Query: 4   VTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQET--KTEDKNFPFETLQSLNY- 55
           + + T N +S      + ++  +A  I     D+I LQE     + K    E L++ +  
Sbjct: 20  MKIMTLNTHSWLEEEPQEKLKQIAQKICHEQYDVIALQEVNQTMDAKRLTSEQLKNFSQV 79

Query: 56  ---------HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
                    +   C  +          +            +        +   +      
Sbjct: 80  QEQTPVRSDNFAYCLIQLLAEQGETYYWSWEMSHIGYAIYEEGNALLSKQPLTSQTHLVS 139

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
                   H   I   +   K   I       S  ++ +    F                
Sbjct: 140 ETKEKEDYHTRKILVGQTSVKTQCITVASCHFSWWVDEKSGFAFEWKELEASLAPLTTPL 199

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK-GIRIDH 225
            +  +                 +   DA           +  +   D W  NK G+RID+
Sbjct: 200 YLLGDFNNPAEGSGYDLVAKSQLPIRDAYPIAQKKQAEAT-IEKRIDGWENNKEGLRIDY 258

Query: 226 IMLSPEATSLLHSARIDTKPR---GWTKP--SDHTPVIVSLD 262
           I +            + +  R   G   P  SDH  V V+L+
Sbjct: 259 IYVP-------QDCFVTSYQRIFDGENGPIVSDHYGVAVTLE 293


>gi|190892451|ref|YP_001978993.1| putative endonuclease/exonuclease/phosphatase family protein
           [Rhizobium etli CIAT 652]
 gi|190697730|gb|ACE91815.1| putative endonuclease/exonuclease/phosphatase family protein
           [Rhizobium etli CIAT 652]
          Length = 369

 Score = 50.6 bits (119), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 44/112 (39%), Gaps = 24/112 (21%)

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
              E   +     + GF + + A       ++   Y+A    +    ++D+I LSP   +
Sbjct: 260 HQPEAESALDVFSHDGFVENVMARRQPLDRWTL--YHARGPQEQHLCQLDYIWLSPALAA 317

Query: 235 L--------LHSA-----------RIDTKPR-GWTKP--SDHTPVIVSLDIP 264
                    +               ++  PR GW +P  SDH PV+++LD+P
Sbjct: 318 HNSGRLPEIIRKGQPYRTVFPPGQEVERYPRTGWDRPKASDHCPVVMTLDLP 369


>gi|47231636|gb|AAT12845.1| pol protein [Drosophila melanogaster]
          Length = 1092

 Score = 50.2 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 41/266 (15%), Positives = 84/266 (31%), Gaps = 38/266 (14%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           ++ +A WN   I  +I  L  +I   +  II + ET+ ++ +   E      Y  +    
Sbjct: 21  ILKIAFWNAGGINNKIDELKLFILNIDAHIIIVTETRLDNNSTKLELPGYFTYLAQNPAS 80

Query: 63  KSYNGVAILSKYQPIEIVTHLP-GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
               GVA +       +       + +      +       ++ + I ++Y P     + 
Sbjct: 81  SKRGGVATIVNSSLRHMALEPIEKECIQSAPIVLLPENNRRSEMIVIASVYCPPSLSWSP 140

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
             +          L FA + +  +  LI  GD+N        +  I          +  Q
Sbjct: 141 HHF-------TDVLNFAEKTMGGQTKLILCGDWNAKH---RQWGCIRACQRGAALYDAIQ 190

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA---TSLLHS 238
           +    + +    A    HDT    S                ID  +           + S
Sbjct: 191 ADSMAEIVATGSATHFPHDTRKSPSA---------------IDFSIC-KRLGRYEKRISS 234

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIP 264
           +   +        SDH P+++ +++ 
Sbjct: 235 SAHLS--------SDHLPILLEINLD 252


>gi|330837418|ref|YP_004412059.1| Endonuclease/exonuclease/phosphatase [Spirochaeta coccoides DSM
           17374]
 gi|329749321|gb|AEC02677.1| Endonuclease/exonuclease/phosphatase [Spirochaeta coccoides DSM
           17374]
          Length = 372

 Score = 50.2 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 40/328 (12%), Positives = 86/328 (26%), Gaps = 61/328 (18%)

Query: 4   VTVATWNVNSI---RA---------------------RIHNLAAWIKEN---NPDIICLQ 36
           VT+ +WNV ++   R                      R+ ++   +      + DII LQ
Sbjct: 34  VTILSWNVQNLMDGRTSGTEYEEYGPSSRWDETAYHLRLEDIRKVLSSRIFPDADIIVLQ 93

Query: 37  ETKTEDKNFPFETLQS----LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQA 92
           E   E+     + +        Y       +    +      +   +   + G +     
Sbjct: 94  EV--ENSGVVADLIAGPLARRGYRWYAAAGQEGGAICTAIISRLNPVRITVQGVEGF--R 149

Query: 93  RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG 152
             +EA F ++  T+ +  ++            + + +        A    + +   +   
Sbjct: 150 PALEAVFNVHGGTVVVWAVHAKSRKEGDRVTEEGRRALASLLSTRARLWRQADPGCLLVI 209

Query: 153 DYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFW---- 208
             ++   P +          A        + +         +          YS W    
Sbjct: 210 AGDMNEDPGEEKGMERGYRTALVRAASSHAREWEAAGSLVVSGMQGGQKGSWYSPWLDGR 269

Query: 209 --DYYADSWSKNKGI-RIDHIMLS------------PEATSLLHSARIDTK-------PR 246
              +   S+       R DHI+ S             E       + + +         R
Sbjct: 270 INTFRPGSYVYEGTWHRYDHILFSGLAPADRAGWRMKEFGCNAPDSAVASDGTPRAWNVR 329

Query: 247 GWTKPSDHTPVIVSLDIPEPRKKQQDST 274
                SDH PV       E  ++    +
Sbjct: 330 LRRGTSDHFPVWGVFRFDERERRHAPVS 357


>gi|237721042|ref|ZP_04551523.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|293372989|ref|ZP_06619358.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           ovatus SD CMC 3f]
 gi|229449877|gb|EEO55668.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|292632057|gb|EFF50666.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           ovatus SD CMC 3f]
          Length = 365

 Score = 50.2 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 45/272 (16%), Positives = 81/272 (29%), Gaps = 33/272 (12%)

Query: 3   VVTVATWNVNSIR------ARIHNLAAWIKENNPDIICLQETKTEDK---NFPFETLQSL 53
           V+TVAT+NV++        +    +A++++    DI+C QE    D+   +  +  L + 
Sbjct: 109 VLTVATYNVDAFNHEHTGYSC-KEIASYMRNLQADILCFQEFGINDEFGIDSIYAALSNW 167

Query: 54  NYHIETCGQKSYNGV------AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107
            YH      +  N +          K + + I        L         T  +    L+
Sbjct: 168 PYHYIPSSPEGKNLLQLAVFSRYPIKEEHLIIYPDSKNCSLACDIEINGRTIRLFNNHLQ 227

Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167
              +           + DD        L       E         D          Y  +
Sbjct: 228 TTEVSQNKRKLEKGLRTDDSQRVEHAALGLIDGLHENFRKRAVQADLLKQLIAASPYPTL 287

Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227
           +   D               +       R+ H   + + ++            +RID+I+
Sbjct: 288 V-CGDFNSLPSSYVYHTIKGDKLQDGFQRSGHGYMYTFKYF---------KHLLRIDYIL 337

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
            SPE  S                 SDH PV++
Sbjct: 338 HSPELNST-------DYFSPDLNYSDHNPVVM 362


>gi|149236269|ref|XP_001524012.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146452388|gb|EDK46644.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 600

 Score = 50.2 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/226 (13%), Positives = 61/226 (26%), Gaps = 30/226 (13%)

Query: 4   VTVATWNV-------------NS------IRARIHNLAAWIKENNPDIICLQET-KTEDK 43
           V + ++N+             N       IR     L A ++  +PDI+CLQE  K +  
Sbjct: 119 VKIMSYNILAQCLIRRSLFPTNGKILKWYIR--KEILLAELRWYDPDILCLQECDKLQFH 176

Query: 44  NFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
           NF    L  L Y  +     + N   +++    I ++ H      D   + ++A      
Sbjct: 177 NFWQSELAKLGYECKFHRYNTKNHGLVIAYKTEIFLIKHQSFIKYDQDVKPLKANCKA-G 235

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
           +   +         P    +  +         + +                         
Sbjct: 236 EASEVNQDCDRVELPPARIQTKNVGFMCYLEFKQSVLERFPYLKQRNGVIIGTTHAFWHP 295

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWD 209
           +            L   + F     +   +           YSF+ 
Sbjct: 296 FGTYDRTRQMYIILHKFREFHHTMQVLSKNKFPF-------YSFFT 334


>gi|301311917|ref|ZP_07217839.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 20_3]
 gi|300830019|gb|EFK60667.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 20_3]
          Length = 287

 Score = 50.2 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 38/269 (14%), Positives = 74/269 (27%), Gaps = 22/269 (8%)

Query: 4   VTVATWNV---NS------IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           + V ++N+   NS       + R    A  +K +  D+   QE      N   + L    
Sbjct: 27  MNVMSYNIRYDNSGDKDNQWKFRRDFAADLVKFHEADVFGAQEVLNNQLNDLLDRLPEYA 86

Query: 55  YHIETCGQKSYNGVA--ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           Y           G    I  +     +         +      +  +    + +    + 
Sbjct: 87  YVGVGREDGKTKGEYAPIFYRKDRFSVEKSGNFWLAEDINAVGKKGWDAACERVATWAIL 146

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                       +  +  + +  R     L LE+    + +  II        P      
Sbjct: 147 KDKNTGKKFFFLNTHLDHMGKVARHEGASLVLEQAKKLSENLPIIVTGDFNAVPSDEPIQ 206

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                   +               A       ++F D+    + K +   ID+I +    
Sbjct: 207 VLTNPSDPR-------HLTHSRTIAGFTYGPEWTFHDFGKIPYDK-REW-IDYIFVKGNI 257

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
              +    + T+      PSDH PVI +L
Sbjct: 258 --KVLRHGVLTETLNNLFPSDHCPVISTL 284


>gi|6320856|ref|NP_010935.1| Isc1p [Saccharomyces cerevisiae S288c]
 gi|731443|sp|P40015|ISC1_YEAST RecName: Full=Inositol phosphosphingolipids phospholipase C;
           Short=IPS phospholipase C; Short=IPS-PLC; AltName:
           Full=Neutral sphingomyelinase; Short=N-SMase;
           Short=nSMase
 gi|603611|gb|AAB64552.1| Yer019wp [Saccharomyces cerevisiae]
 gi|285811643|tpg|DAA07671.1| TPA: Isc1p [Saccharomyces cerevisiae S288c]
          Length = 477

 Score = 50.2 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/268 (13%), Positives = 77/268 (28%), Gaps = 19/268 (7%)

Query: 26  KENNPDIICLQETKTEDK--NFPFETLQSLNYH-IETCGQKSYNGVAILSKYQPIEIVTH 82
           +  + D+I LQE    +              Y  +   G  +  G+AILSK        +
Sbjct: 89  ENEDYDVIALQEIWCVEDWKYLASACASKYPYQRLFHSGILTGPGLAILSKVPIESTFLY 148

Query: 83  LPGDDLDVQARFIEATFTINTQTLRI------------GNLYLPHGNPITSTKYDDKISW 130
               +    A F    +   +  + +             +++ P+     +     +   
Sbjct: 149 RFPINGRPSAVFRGDWYVGKSIAITVLNTGTRPIAIMNSHMHAPYAKQGDAAYLCHRSCQ 208

Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG 190
              F R      +    +I  GD N  P                   ++           
Sbjct: 209 AWDFSRLIKLYRQAGYAVIVVGDLNSRPGSLPHKFLTQEAGLVDSWEQLHGKQDLAVIAR 268

Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR---G 247
            +   +         S  + +      ++  R+D+ ++ P+    +  A +    R    
Sbjct: 269 LSPLQQLLKGCTTCDSLLNTWRAQRQPDEACRLDYALIDPDFLQTV-DAGVRFTERIPHL 327

Query: 248 WTKPSDHTPVIVSLDIPEPRKKQQDSTS 275
               SDH     +L+I     + + STS
Sbjct: 328 DCSVSDHFAYSCTLNIVPQGTESRPSTS 355


>gi|294501930|ref|YP_003565630.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           megaterium QM B1551]
 gi|295707279|ref|YP_003600354.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           megaterium DSM 319]
 gi|294351867|gb|ADE72196.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           megaterium QM B1551]
 gi|294804938|gb|ADF42004.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           megaterium DSM 319]
          Length = 261

 Score = 50.2 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 85/265 (32%), Gaps = 14/265 (5%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET--KTEDKNFPFETLQSLNYH 56
           + + T N +S +      ++  LA  IK+   D+I LQE   K  D  + ++ ++S NY 
Sbjct: 1   MKLLTLNCHSWQEENQLDKLSCLAEVIKKEKYDVIALQEVSQKV-DAPYVYDYIRSDNYA 59

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                +    G      +    I   +  + + +  +           +      Y    
Sbjct: 60  WLLAKELGKQGEDYQLVWDLSHIGYEVYEEGIAILTKHPIIEEHSFFVSQTSNIDYWKTR 119

Query: 117 NPIT-STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
             +  + +Y+ ++              E             + + +  +    + NDA  
Sbjct: 120 RIVGATIEYEKELLTFYSCHLGWWDDEEEPFKQQVDTLLAHVHKDNPFFLLGDFNNDAHR 179

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
             E    +  L + G  D    ++      +     A      + +R+D I+ S      
Sbjct: 180 RNEG---YDYLLSQGLYDTYTLSNKKDSGITVKGNIAGWDDNERALRLDLILSSH--AQD 234

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVS 260
           + S+ +      +   SDH  V V 
Sbjct: 235 IQSSTVVFNGIHYPVVSDHFGVSVE 259


>gi|91776730|ref|YP_546486.1| endonuclease/exonuclease/phosphatase [Methylobacillus flagellatus
           KT]
 gi|91710717|gb|ABE50645.1| Endonuclease/exonuclease/phosphatase [Methylobacillus flagellatus
           KT]
          Length = 251

 Score = 50.2 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/266 (10%), Positives = 66/266 (24%), Gaps = 26/266 (9%)

Query: 2   SVVTVATWNVN----SIRAR--IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55
           SV+ +AT+N++    S  AR  +H     I++   D++ LQE +        +     + 
Sbjct: 3   SVIRIATFNIHKGVTSFNARFALHEQRELIRKLQADVVFLQEVR--------DQHIKHSR 54

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
                           + +       +            +     +  + + I       
Sbjct: 55  RFSAWPLAGQVEFLADAVWSDYAYGKNSVYPAGHHGNALLSKYPIVKYENIDISAHQSEQ 114

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
              +   +                  L                +     +         F
Sbjct: 115 RGML-HGEIAVPGWHQPLHCICVHLGLFAGWRRKQIAILRKQIEEVVPKDAP-LVIAGDF 172

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
                 + ++L +      +   H        +  +   +      R+D I +       
Sbjct: 173 NDWSMSAGRELVHGLHLQEVFEHHSGGKPARSFPSFLPLF------RLDRIYVRGF---H 223

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
           +    +   P+   K SDH  +   L
Sbjct: 224 VRHVEVHAGPQFM-KVSDHAALTAVL 248


>gi|299532507|ref|ZP_07045897.1| Endonuclease/exonuclease/phosphatase [Comamonas testosteroni S44]
 gi|298719454|gb|EFI60421.1| Endonuclease/exonuclease/phosphatase [Comamonas testosteroni S44]
          Length = 291

 Score = 50.2 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 91/303 (30%), Gaps = 58/303 (19%)

Query: 4   VTVATWNV------NSIRARIHNLAAWIK----ENNPDIICLQETKTEDKNF---PFETL 50
           + + TWNV      + + +    +   ++        D++CLQE      +    P + L
Sbjct: 1   MNILTWNVQWCCGMDGLVSVERIVRHALQMGEQSGGLDVLCLQEIAVNYPDLQGRPGDQL 60

Query: 51  QSL-----NYHIET--------CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA 97
             L      + I                 G  I ++   + +  +L         R ++ 
Sbjct: 61  AELKALLPGWQIFFGASVDEFTSSGHQRFGNLIATRLPVLLVQHYLLPMPAQADMRCMQR 120

Query: 98  TFTINTQ------TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFAS------------ 139
             ++ T        +RI   +L + +          +  ++      +            
Sbjct: 121 MCSVVTVDDAALGPVRIMTTHLEYFSARQRMAQAGALRALQMQACALADAPPQPASDGSP 180

Query: 140 -QRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT 198
            Q        +  GD+N  P   +                V      LQ   + ++    
Sbjct: 181 YQTKPHTRHAVLCGDFNFEPHEPEYA--------VLSAPWVAGEEGCLQAGQWRNSWDVL 232

Query: 199 HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVI 258
           +        +     +W    G   D I +S      +H+  +D+     T+ SDH PV+
Sbjct: 233 YPGQPQPPTFRLVDRTWGAEPGA-CDLIWVSDSLCQRVHTWSVDSA----TQASDHQPVM 287

Query: 259 VSL 261
           ++L
Sbjct: 288 LTL 290


>gi|284033951|ref|YP_003383882.1| endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836]
 gi|283813244|gb|ADB35083.1| Endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836]
          Length = 293

 Score = 50.2 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 40/275 (14%), Positives = 80/275 (29%), Gaps = 36/275 (13%)

Query: 4   VTVATWNVN-SIRARIHNLAAW------IKENNPDIICLQET------KTEDKNFPFETL 50
           + VAT+N++    A   N+         ++  + D+I LQE       +++ ++   E  
Sbjct: 32  LRVATYNIHAG--AGHDNVFDLDRTETTLRALDADVIGLQEVDVHWSERSQWRDLVSELA 89

Query: 51  QSLNYH--IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108
           Q L                     +   + +++  P  ++        +T         +
Sbjct: 90  QRLGMRAGFAPIYDFDPLRAGEPRRQYGLAVLSKAPILEVQNHNLTRLSTQDPGAGPTPM 149

Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168
                       +  +        R      +    E   I A D             + 
Sbjct: 150 PGFLEAVVQAKGARLHFYVTHLDYRADPSLRRTEVDETLKILADD-----PAGANQVLVG 204

Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
             N      E+ + +  + +      I   +          Y A +  K    RID+I +
Sbjct: 205 DLNAEPQAAELARLWPAMTDAWTAAPITTGNPL-------TYPAATPVK----RIDYITV 253

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           S      +  A +   P      SDH PV+  L +
Sbjct: 254 SDGVG--VLRAEVPASP-ALLAASDHRPVVADLAL 285


>gi|171060686|ref|YP_001793035.1| endonuclease/exonuclease/phosphatase [Leptothrix cholodnii SP-6]
 gi|170778131|gb|ACB36270.1| Endonuclease/exonuclease/phosphatase [Leptothrix cholodnii SP-6]
          Length = 276

 Score = 50.2 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 43/288 (14%), Positives = 84/288 (29%), Gaps = 67/288 (23%)

Query: 2   SVVTVATWNVN-SIR-------ARIHNLAAWIKENNPDIICLQETKT------------- 40
           S + VAT+N++  +R         IHNL   ++  + D++CLQE +              
Sbjct: 27  SRLRVATYNIHKGVRGMGPQKRLEIHNLGMGVQALDADLVCLQEVRLFHHGDANRFDHTH 86

Query: 41  --EDKNFPFETLQSLNYHIETCGQK----SYNGVAILSKYQPIEIVTHLPGDDLDVQARF 94
               K    E L    Y              +G A+LS++   ++  H   D    Q   
Sbjct: 87  FGWPKQGQAEFLAPEGYESAYRTNAVTRGGEHGNALLSRWPLGDVGHHDVSDHRFEQRGL 146

Query: 95  IEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDY 154
           +      +  T+     +    +     + +    +I   +   +  +   +   +    
Sbjct: 147 LHTMVQWHGVTVHTIVAHFGLIHASRVRQAERLGDYIDAKIPRGALVVVAGDFNDWGERL 206

Query: 155 NIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADS 214
           +  P             DA        S   L  +              +Y+        
Sbjct: 207 D--PIIGAAGLQRAAPPDARRGPLTFPSRMPLFAL------------DRVYT-------- 244

Query: 215 WSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
               +G+R                  +      W + SDH P++V L+
Sbjct: 245 ----RGLR-------------CADTFVPRGA-AWARMSDHLPLVVELE 274


>gi|322824803|gb|EFZ30090.1| RNA-editing complex protein MP100, putative [Trypanosoma cruzi]
          Length = 968

 Score = 50.2 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/292 (11%), Positives = 68/292 (23%), Gaps = 47/292 (16%)

Query: 2   SVVTVATWNV-------------------NSIRARIHNLAAWIKENNPDIICLQETKTED 42
             + + TWNV                    S + R   LA  I++ + D++ +QE     
Sbjct: 692 KTLKLLTWNVMFDRYSGKPTPLGMPGIDWCSPK-RYPVLARVIQQEDADVVGMQEV---- 746

Query: 43  KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIE-IVTHLPGDDLDVQARFIEATFTI 101
           +   +E L    +  E            +S +  +  +                  T  +
Sbjct: 747 EPVFWEFLSKQPWMRENYYFSCGYTSPSISPWGVLMLVHRRRFPVQSITYLNVPAWTNHV 806

Query: 102 NTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161
           +   +    L     +   +          +         L         GD   +   +
Sbjct: 807 SLMPVVCLQLPHGPVHVAAAHLLAPYTKSHETARTSQDSALRHHMLKTLTGDVVTMGDFN 866

Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI 221
           D              ++              D             F+             
Sbjct: 867 DWPTNEFLMPAESQYVDCWPLIYPHDAGKTMDETNTFCKLKVEEMFFG------------ 914

Query: 222 RID-HIMLSPEATS---------LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           R D   + S               ++    +    G+  PSDH  V ++  +
Sbjct: 915 RSDKLFLRSRRLAPVEGHLVGTKSVNDENGNKDAPGYLFPSDHYGVSMTFAL 966


>gi|296863686|pdb|3MPR|A Chain A, Crystal Structure Of EndonucleaseEXONUCLEASEPHOSPHATASE FA
           Protein From Bacteroides Thetaiotaomicron, Northeast
           Struct Genomics Consortium Target Btr318a
 gi|296863687|pdb|3MPR|B Chain B, Crystal Structure Of EndonucleaseEXONUCLEASEPHOSPHATASE FA
           Protein From Bacteroides Thetaiotaomicron, Northeast
           Struct Genomics Consortium Target Btr318a
 gi|296863688|pdb|3MPR|C Chain C, Crystal Structure Of EndonucleaseEXONUCLEASEPHOSPHATASE FA
           Protein From Bacteroides Thetaiotaomicron, Northeast
           Struct Genomics Consortium Target Btr318a
 gi|296863689|pdb|3MPR|D Chain D, Crystal Structure Of EndonucleaseEXONUCLEASEPHOSPHATASE FA
           Protein From Bacteroides Thetaiotaomicron, Northeast
           Struct Genomics Consortium Target Btr318a
          Length = 298

 Score = 50.2 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 42/294 (14%), Positives = 78/294 (26%), Gaps = 45/294 (15%)

Query: 2   SVVTVATWNV-----------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETL 50
           + +TVA++N+           +    R   +A  ++ ++ DI   QE          E L
Sbjct: 5   TSLTVASYNLRNANGSDSARGDGWGQRYPVIAQXVQYHDFDIFGTQECFLHQLKDXKEAL 64

Query: 51  QSLNY-HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
              +Y  +     K     + +        +       L          +      +   
Sbjct: 65  PGYDYIGVGRDDGKDKGEHSAIFYRTDKFDIVEKGDFWLSETPDVPSKGWDAVLPRICSW 124

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
             +           ++     I +  R  S  L  E+        N+             
Sbjct: 125 GHFKCKDTGFEFLFFNLHXDHIGKKARVESAFLVQEKXKELGRGKNLP------AILTGD 178

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
            N             K       +     +  +  ++ +D   +S+++    RIDHI +S
Sbjct: 179 FNVDQTHQSYDAFVSKGVLCDSYEKCDYRYALNGTFNNFD--PNSFTE---SRIDHIFVS 233

Query: 230 PEA--------------------TSLLHSA--RIDTKPRGWTKPSDHTPVIVSL 261
           P                         +      I  K      PSDH PV V L
Sbjct: 234 PSFHVKRYGVLTDTYRSVRENSKKEDVRDCPEEITIKAYEARTPSDHFPVKVEL 287


>gi|224049325|ref|XP_002191825.1| PREDICTED: CCR4 carbon catabolite repression 4-like [Taeniopygia
           guttata]
          Length = 425

 Score = 50.2 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/264 (12%), Positives = 70/264 (26%), Gaps = 28/264 (10%)

Query: 21  LAAWIKENNPDIICLQETKTEDKNFP--FETLQSLNYHIETCGQKSYNGVAILSKYQPIE 78
           +   I    PDI+CLQE    D  F      L  L Y      +         S    +E
Sbjct: 173 ILEEILAYKPDILCLQEV---DHYFDTFEPLLSRLGYQCTFFPKP-------WSPCLDVE 222

Query: 79  IVTHLPGDDLDVQARFIEATFT--INTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
                 G  +       E   +  I    +++    +     +   +           L+
Sbjct: 223 HNNGPDGCAMFFLKERFELVNSANIRLMAMKLKTNQVAIAQTLKCHETGRLFCIAVTHLK 282

Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN----MGFT 192
             +               N+         P+I   D           +   +        
Sbjct: 283 ARTGWERFRSAQGCDLLQNLKNITQGAKIPLIVCGDFNAEPTEEVYREFSNSSLNLNSAY 342

Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR------ 246
             +     +   Y+ W        ++    +D+I  S  A ++  +  + T+ +      
Sbjct: 343 KLLSPDGQSEPPYTTWKIRPSGECRHT---LDYIWYSQHALNVNSALGLLTEEQIGPNRL 399

Query: 247 -GWTKPSDHTPVIVSLDIPEPRKK 269
             +  PSDH  ++      +   +
Sbjct: 400 PSFNYPSDHLSLVCDFSFNQDPDR 423


>gi|154276646|ref|XP_001539168.1| predicted protein [Ajellomyces capsulatus NAm1]
 gi|150414241|gb|EDN09606.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 1913

 Score = 50.2 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/278 (13%), Positives = 77/278 (27%), Gaps = 44/278 (15%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKE---NNPDIICLQETKTEDKNFP-FETLQSLNYHIET 59
           + +  +NV   ++R   LA+  +     + DI+ +QE        P        +YH   
Sbjct: 646 LRILQYNV--WKSRDVVLASLFQNRKILDYDILAIQE--------PWRNPFIETSYHPLK 695

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
              +        ++          PG               I+   + +  L    G  +
Sbjct: 696 AQFQLTYLANAATRVCLYISKRINPGTWSVSY---------ISKDIISLQILNPHSGRKV 746

Query: 120 TSTK-YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
           +    Y++  +     +  A + L   E +I  GD+N+        +             
Sbjct: 747 SVFNVYNEVGTDTLSTMAEAIRALNSPEDIIVLGDFNLHHPLWSSTHRHGGRG-----PS 801

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
            +     ++        +    TH              K+    ID    S +    +  
Sbjct: 802 AQGLLTVIEEFQLQLLTKPGTPTH------------RWKDGESTIDLTFASEDLADRVTH 849

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQ 276
            ++D +       SDH P+ +  D              
Sbjct: 850 CKVDREV---DCDSDHLPIALVFDWNWQPANPTRKRLW 884


>gi|255551567|ref|XP_002516829.1| hydrolase, putative [Ricinus communis]
 gi|223543917|gb|EEF45443.1| hydrolase, putative [Ricinus communis]
          Length = 490

 Score = 50.2 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/271 (12%), Positives = 72/271 (26%), Gaps = 32/271 (11%)

Query: 21  LAAWIKENNPDIICLQETKTEDKNF--PFETLQ---SLNYHIETCGQKSY-NGVAILSKY 74
           +   ++E + D++ LQ+ K +++    P   L     + Y         Y N +      
Sbjct: 220 ILEVLREVDADVLALQDVKAQEEKGMRPLSDLAASLGMKYAFAESWAPDYGNAILSKWPI 279

Query: 75  QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRF 134
           +  ++      +D     +   +             L   + N                 
Sbjct: 280 KRWKVQKIANDEDFRNVLKATISVPGAGELDFYCTQLDHLNENW-------RMKQINAII 332

Query: 135 LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDA 194
               S  +         G      +  D              +EV    +  + +   D 
Sbjct: 333 QSTNSPHVLAGGLNSLTGSDYSPERWMDIVKYYEEIGKPRPKIEVTNFLKGKEYIDAKDF 392

Query: 195 IRATHDTHHLYSFWDYYADSWSKN------KGIRIDHIMLSPEATSLLHSARIDTKPRGW 248
                    +         +  +N       G R+D+++ S ++                
Sbjct: 393 AGECEPVVII---------AKGQNVQGTCKYGTRVDYVLASQDSPYKFVPGS--YTVISS 441

Query: 249 TKPSDHTPVIVSLDIPEPRKKQQDSTSQNMK 279
              SDH   IV +DI +  +  Q   +Q  K
Sbjct: 442 KGTSDHH--IVKVDITKASEANQGRQTQKAK 470


>gi|156933850|ref|YP_001437766.1| hypothetical protein ESA_01676 [Cronobacter sakazakii ATCC BAA-894]
 gi|156532104|gb|ABU76930.1| hypothetical protein ESA_01676 [Cronobacter sakazakii ATCC BAA-894]
          Length = 370

 Score = 50.2 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 37/112 (33%), Gaps = 26/112 (23%)

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY--SFWDYYADSWSKNKGIRIDHIML 228
            D   T E       L+     DA       +  Y  ++     +S   NK   +D+I+L
Sbjct: 266 GDFNDTPESDALAPLLKETDLRDAFTHPAFDNGGYPGTW----GNSAKNNK---LDYILL 318

Query: 229 SPEATSLLHSARIDTKPRG-WTKP----------------SDHTPVIVSLDI 263
           SP     + +  +  K      +P                SDH  + V L+I
Sbjct: 319 SPALWERVTAGGVIRKGMWPGERPVKWEVYPELKKPQQAGSDHAALWVDLNI 370


>gi|321469761|gb|EFX80740.1| hypothetical protein DAPPUDRAFT_318357 [Daphnia pulex]
          Length = 391

 Score = 50.2 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 47/281 (16%), Positives = 74/281 (26%), Gaps = 35/281 (12%)

Query: 7   ATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDK--NFPFETLQSLNYHI 57
            T N   I       R RI  + + ++  + D + LQE   ED       +      Y  
Sbjct: 6   LTLNCWGIAGVSKDRRTRIDAIGSHLQLGHYDFVFLQEVWVEDDFQAIVKQVGNIFPYSH 65

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
                    G+ ILSK + I+++ H    +  +        F      L     +    N
Sbjct: 66  YFHSGVIGGGICILSKAKIIDVLFHAWSLNGYIHKIQHGDWFGGKGVGLCTVVYHGMKIN 125

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
                     ++ +      AS        +        I    +  +  I   D     
Sbjct: 126 L--------YVTHLHAEYNPASDEYCAHRVVQAFETSQFIRYTRNKADFCILGGDLNTEP 177

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTH----------HLYSFWDYYADSWSKNKGIRIDHIM 227
           E         +    D   +T              + Y+         +   G RID +M
Sbjct: 178 ENLAYRLICDHTSLKDLYLSTGKPEIEGMTSETPANSYT---ASESLRACPNGKRIDFVM 234

Query: 228 LS--PEATSLLHSARIDTKPRGWTKP---SDHTPVIVSLDI 263
            S             I   PR    P   SDH  V     I
Sbjct: 235 CSSRKGLQIETIDVNIPLPPRIPNYPFSYSDHEAVCAKFRI 275


>gi|262383745|ref|ZP_06076881.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|262294643|gb|EEY82575.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
          Length = 287

 Score = 50.2 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 38/269 (14%), Positives = 74/269 (27%), Gaps = 22/269 (8%)

Query: 4   VTVATWNV---NS------IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           + V ++N+   NS       + R    A  +K +  D+   QE      N   + L    
Sbjct: 27  MNVMSYNIRYDNSGDKDNQWKFRRDFAADLVKFHEADVFGAQEVLNNQLNDLLDRLPEYA 86

Query: 55  YHIETCGQKSYNGVA--ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           Y           G    I  +     +         +      +  +    + +    + 
Sbjct: 87  YVGVGREDGKTKGEYAPIFYRKDRFSVEKSGNFWLAEDINAVGKKGWDAACERVATWAIL 146

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                       +  +  + +  R     L LE+    + +  II        P      
Sbjct: 147 KDKNTGKKFFFLNTHLDHMGKVARHEGASLVLEQAKKLSENLPIIVTGDFNAVPSDEPIQ 206

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                   +               A       ++F D+    + K +   ID+I +    
Sbjct: 207 VLTNPSDPR-------HLTHSRTIAGFTYGPEWTFHDFGKIPYDK-REW-IDYIFVKGNI 257

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
              +    + T+      PSDH PVI +L
Sbjct: 258 --KVLRHGVLTETLNNLFPSDHCPVISTL 284


>gi|258542290|ref|YP_003187723.1| hypothetical protein APA01_11960 [Acetobacter pasteurianus IFO
           3283-01]
 gi|256633368|dbj|BAH99343.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01]
 gi|256636427|dbj|BAI02396.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-03]
 gi|256639480|dbj|BAI05442.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-07]
 gi|256642536|dbj|BAI08491.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-22]
 gi|256645591|dbj|BAI11539.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-26]
 gi|256648644|dbj|BAI14585.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-32]
 gi|256651697|dbj|BAI17631.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256654688|dbj|BAI20615.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-12]
          Length = 227

 Score = 50.2 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 47/129 (36%), Gaps = 11/129 (8%)

Query: 1   MSVVTVATWNVNSIR---ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57
           M  V V +WN+  +R   A +H++AA I+   PD++ +QE   E    P        ++ 
Sbjct: 25  MEGVRVISWNL--LRRTGATVHDIAALIEAEKPDVLLMQEATVEIDVLPDVIG---GHYA 79

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
                   +GVA  S+                    F      I  +   + N++L HG 
Sbjct: 80  RNPQPGRIHGVACWSRIPFARAPRACTI---PSGPLFKRHAQIIEYEKFSLANVHLSHGQ 136

Query: 118 PITSTKYDD 126
            +   +   
Sbjct: 137 MLNRKQLRR 145


>gi|147796513|emb|CAN68153.1| hypothetical protein VITISV_009302 [Vitis vinifera]
          Length = 1323

 Score = 50.2 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 3/42 (7%)

Query: 1   MS-VVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETK 39
           MS  + +  WN   + +R     +  +++  N D++ +QETK
Sbjct: 288 MSFSMKIINWNTRGLGSRNKRRVVKDFLRSENSDVVMIQETK 329


>gi|156376989|ref|XP_001630640.1| predicted protein [Nematostella vectensis]
 gi|156217665|gb|EDO38577.1| predicted protein [Nematostella vectensis]
          Length = 145

 Score = 50.2 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 5/43 (11%)

Query: 1   MSVVTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQET 38
           +  +   TWNV+ +     R R   +   IK + PDI+ LQE 
Sbjct: 89  LRNLKFLTWNVDGLDQKNLRPRTQAVIDLIKSHKPDIVYLQEV 131


>gi|149926631|ref|ZP_01914891.1| predicted endonuclease / exonuclease / phosphatase family protein
           [Limnobacter sp. MED105]
 gi|149824560|gb|EDM83776.1| predicted endonuclease / exonuclease / phosphatase family protein
           [Limnobacter sp. MED105]
          Length = 264

 Score = 50.2 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/269 (12%), Positives = 61/269 (22%), Gaps = 21/269 (7%)

Query: 4   VTVATWNVN----SIR---ARIHNLAAWIKENNPDIICLQET--KTEDKNFPFETLQSLN 54
           + +AT+N++     +R     IH L   I   N D++ LQE   + +     FE      
Sbjct: 3   LRIATYNIHKGVMGLRKPALTIHALREQIHAMNADLVFLQEVQGRHDRHAGKFEHWPEGG 62

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
            H       S     +    Q       +              +       L        
Sbjct: 63  QHEFLAQSPSAIDDLLGHASQQYFTAYGMNAVYSHGHHGNALLSRYEIEWML-----NQD 117

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
             +     +               +                     H   +         
Sbjct: 118 VSDHRLEQRGLLHCCVKTPAGPIHAMVAHFGLLYRSRVRQASKLIEHVGTHVPAGMPLVV 177

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEAT 233
                    +    +                        S+  +   + +D +       
Sbjct: 178 AGDFNDWQRRLGPILQQGLKAEEVMPLDKKNRL--ARVGSFPSRFPVLGLDRVFARGF-- 233

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
             +H A +   P  W K SDH P +V L+
Sbjct: 234 -KVHEATVLHGP-AWAKLSDHAPFVVDLE 260


>gi|326569254|gb|EGE19315.1| endonuclease/exonuclease/phosphatase [Moraxella catarrhalis BC7]
 gi|326575442|gb|EGE25367.1| endonuclease/exonuclease/phosphatase [Moraxella catarrhalis
           101P30B1]
          Length = 249

 Score = 50.2 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/270 (13%), Positives = 70/270 (25%), Gaps = 39/270 (14%)

Query: 1   MSVVTVATWNV-------NSIRARIHNLAAWIKENNPDIICLQETKTEDKN--FPFETLQ 51
           M  +T+ ++N+       N +  R+  +   + + NPDI+CLQE + ++      F    
Sbjct: 1   MKSITITSYNIHKGMSPTNRL-VRLMGMKDALLKTNPDILCLQEVQGQNLKRTIDFAEFP 59

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
               H                         +   +        +          L I   
Sbjct: 60  DGGQHEWFGEFLGIAS----------SYGKNAEYEHGHHGNAVLSRHPLDPKHNLNITVN 109

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
            L     +    + D        L      L  +    +    + I       +      
Sbjct: 110 RLEKRGVLHCEVHPDGWRRPVVVLCCHLNLLHRDRIKQYQAIRDYIFTLPADASL----- 164

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY--SFWDYYADSWSKNKGIRIDHIMLS 229
                     S +  Q +            H  Y  +F             + +D I + 
Sbjct: 165 -ILAGDFNDWSKKSCQALSSLGLSEVFLQVHGEYPATFPAKMPV-------LSLDRIYV- 215

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
                 +H+A +      W+  SDH P+  
Sbjct: 216 RRL--KVHNAMVHGGV-PWSNLSDHLPISA 242


>gi|92859618|ref|NP_003071.2| sphingomyelin phosphodiesterase 2 [Homo sapiens]
 gi|160332206|sp|O60906|NSMA_HUMAN RecName: Full=Sphingomyelin phosphodiesterase 2; AltName:
           Full=Lyso-platelet-activating factor-phospholipase C;
           Short=Lyso-PAF-PLC; AltName: Full=Neutral
           sphingomyelinase; Short=N-SMase; Short=nSMase
 gi|56203787|emb|CAI23338.1| sphingomyelin phosphodiesterase 2, neutral membrane (neutral
           sphingomyelinase) [Homo sapiens]
          Length = 423

 Score = 50.2 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 44/297 (14%), Positives = 90/297 (30%), Gaps = 37/297 (12%)

Query: 4   VTVATWNVNSI------RA-RIHNLAAWIKENNPDIICLQETKT-EDKNFPFETLQS-LN 54
           + +   N   I      RA R+  L  ++ + + D+  L+E  + +D  +  + L     
Sbjct: 9   LRIFNLNCWGIPYLSKHRADRMRRLGDFLNQESFDLALLEEVWSEQDFQYLRQKLSPTYP 68

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN---- 110
                      +G+ + SK+   E+  H+   +           F+     L + +    
Sbjct: 69  AAHHFRSGIIGSGLCVFSKHPIQELTQHIYTLNGYPYMIHHGDWFSGKAVGLLVLHLSGM 128

Query: 111 -------LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                        N         +++      +F     +  + ++  GD N+ P+   C
Sbjct: 129 VLNAYVTHLHAEYNRQKDIYLAHRVAQAWELAQFIHHTSKKADVVLLCGDLNMHPEDLGC 188

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223
                W       LE R      +                                G+RI
Sbjct: 189 CLLKEWTGLHDAYLETRDFKGSEEGNTMVPKNCYVSQQEL-----------KPFPFGVRI 237

Query: 224 DHIM---LSPEATSLLHSARIDT--KPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTS 275
           D+++   +S        S    T   P   T  SDH  ++ +L +     +Q  S++
Sbjct: 238 DYVLYKAVS-GFYISCKSFETTTGFDPHRGTPLSDHEALMATLFVRHSPPQQNPSST 293


>gi|288962299|ref|YP_003452594.1| hypothetical protein AZL_d02240 [Azospirillum sp. B510]
 gi|288914565|dbj|BAI76050.1| hypothetical protein AZL_d02240 [Azospirillum sp. B510]
          Length = 269

 Score = 50.2 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 39/269 (14%), Positives = 72/269 (26%), Gaps = 42/269 (15%)

Query: 1   MSVVTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55
           M+  +VATWN++S      R     +A  I++ + D+I LQE                ++
Sbjct: 38  MTAFSVATWNIHSCVGLDARFAPDRVAQVIRDLDVDLIGLQEV-------------GWHH 84

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
             E+   +                  H                 ++    L +G      
Sbjct: 85  RGESGMDQFAFLEQHTGLKAYAAPTKHSARAHYGNCLLTRLPVRSMEPIDLSVGKREPRG 144

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
           G           +  I   L         +   I +        P      +        
Sbjct: 145 GIDAVIEVRGRPVRVIVAHLGLDPWERAKQVSDIVSRVERQPALPTLFMGDLNEW--TPS 202

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
           +  +RQ      ++    +  A   T                   +R+D I ++      
Sbjct: 203 SPRLRQLASSFADVANPRSFHARMPT-------------------LRLDRIYVTGGL--Q 241

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
           + +  +        + SDH PV   L IP
Sbjct: 242 IPAFEVVRTIL-TRRASDHLPVRAVLAIP 269


>gi|148379569|ref|YP_001254110.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum A str. ATCC 3502]
 gi|153934095|ref|YP_001383947.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum A str. ATCC 19397]
 gi|148289053|emb|CAL83143.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum A str. ATCC 3502]
 gi|152930139|gb|ABS35639.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum A str. ATCC 19397]
          Length = 263

 Score = 50.2 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/274 (12%), Positives = 74/274 (27%), Gaps = 25/274 (9%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYHI 57
           + + T N +S +      +I  LA  I ENN D+I LQE  ++ +    F+ ++  N+  
Sbjct: 1   MKILTLNCHSWQEEKQLEKIKYLAKVIYENNYDVIALQEVSQSINSKILFDNIKEDNFAF 60

Query: 58  E-TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT-------QTLRIG 109
                 +          +    I      + L +  +                    +  
Sbjct: 61  ILIKELEKLGENRFKILWDFAHIGYDKYEEGLAILTKHPIKEKKSFYISKSKDKNFWKTR 120

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
            +     +   +  Y                + ++ + +    +        D  N    
Sbjct: 121 KIIKCKIDYNNNPIYFYSCHLGWWDDEEEDFKFQVNKLVQELKEKETCILMGDYNNDAFL 180

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
            N     L  ++           D           +             K +R+D I+ +
Sbjct: 181 NNKGYDYLINKKLKDIYHLARSKDNGVTAIGDIDGW---------KGNTKDMRLDLILSN 231

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                 +   ++          SDH  V   ++I
Sbjct: 232 KNL--KVEYCKVIFNGIRKEIISDHFGVEAKIEI 263


>gi|237716270|ref|ZP_04546751.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262407875|ref|ZP_06084423.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|294807694|ref|ZP_06766487.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           xylanisolvens SD CC 1b]
 gi|229443917|gb|EEO49708.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262354683|gb|EEZ03775.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|294445130|gb|EFG13804.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           xylanisolvens SD CC 1b]
 gi|295084435|emb|CBK65958.1| Metal-dependent hydrolase [Bacteroides xylanisolvens XB1A]
          Length = 365

 Score = 50.2 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 44/272 (16%), Positives = 79/272 (29%), Gaps = 33/272 (12%)

Query: 3   VVTVATWNVNSIR------ARIHNLAAWIKENNPDIICLQETKTEDK---NFPFETLQSL 53
           V+TVAT+NV++        +    +A++++    DI+C QE    D+   +     L + 
Sbjct: 109 VLTVATYNVDAFNHEHTGYSC-KEIASYMRNLQADILCFQEFGINDEFGIDSISAALSNW 167

Query: 54  NYHIETCGQKSYNGV------AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107
            YH      +  N +          K + + I        L         T  +    L+
Sbjct: 168 PYHYIPSSPEGKNLLQLAVFSRYPIKEEHLIIYPDSKNCSLACDIEINGRTIRLFNNHLQ 227

Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167
              +           + DD        L       E         D          Y  +
Sbjct: 228 TTEVSQNKRKLEKGLRTDDSQRVEHATLGLIDGLHENFRKRAVQADLLKQLIAASPYPTL 287

Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227
           +   D               +        + H   + + ++            +RID+I+
Sbjct: 288 V-CGDFNSLPSSYVYHTIKGDKLQDGFQTSGHGYMYTFKYF---------KHLLRIDYIL 337

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
            SPE  S                 SDH PV++
Sbjct: 338 HSPELNST-------DYFSPDLNYSDHNPVVM 362


>gi|167569725|ref|ZP_02362599.1| endonuclease/exonuclease/phosphatase family superfamily protein
           [Burkholderia oklahomensis C6786]
          Length = 286

 Score = 50.2 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/292 (12%), Positives = 74/292 (25%), Gaps = 43/292 (14%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNP-------DIICLQET----KT-----EDKNFPF 47
           + + +WN+   R          +  +        D++C+QE     +       D  +  
Sbjct: 1   MRLISWNIQWGRDA-DGTVDLARTIDAARRLVDFDVLCMQEVTRGFRALPGGPSDDQYAE 59

Query: 48  ETLQSLNYHIE--------TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF 99
                  Y +              +       +    + +          +      A  
Sbjct: 60  LAALLPGYSVFDAIGVDLPPLEPGAPRRQFGNALATRLPVER---VMRHALPWPASAAAP 116

Query: 100 TINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIF--------- 150
           ++    L +          +  T  +   +  +     A +RL  E              
Sbjct: 117 SMPRCALEVTLRAPLGALRVVVTHLEYYSAEQRLAQVDALRRLHREAAAHTRASAPPETP 176

Query: 151 AGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL-YSFWD 209
            G +    +  D      + +        R          F DA  A H       +   
Sbjct: 177 TGPFAPSARAADAIVCGDFNSAYRSDAYRRFLAPFPDAPRFVDAWLARHPGETPPMTAGV 236

Query: 210 YYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           Y  + W +   +  D   ++      L    ID    G  + SDH P+ + L
Sbjct: 237 YDTEQWKEGP-LTCDFAFVTDTLIGRLSRCEID----GAVRASDHQPIALEL 283


>gi|147858484|emb|CAN79230.1| hypothetical protein VITISV_033954 [Vitis vinifera]
          Length = 876

 Score = 50.2 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/258 (11%), Positives = 67/258 (25%), Gaps = 58/258 (22%)

Query: 5   TVATWNVNSIRAR--IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
            + +WNV     +     + ++IK    D++CLQETK ++       L+SL         
Sbjct: 344 RLLSWNVRGANXKDKRKXIKSFIKSQMVDVVCLQETKIKE--MTIGLLRSLG----VGRH 397

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
             ++ V      + I +                                     + +   
Sbjct: 398 LDWSAVNSRGATRGILVFWDNRVF------------------------------DLVDLG 427

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           K +  IS   +               +              Y   +  N+      +R  
Sbjct: 428 KGEYSISCCFKNCEDGVLWEFTGVYGLVCRRKIEDFWEELGYGRRVTFNNEEIFRSIRGF 487

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG-IRIDHIMLSPEATSLLHSARI 241
             +   +               +++          N+   R+D  +++      L    +
Sbjct: 488 GAEGHPL-----------AGGPFTW-----RGRLNNQSQSRLDPFLVTDNW-DNLFDGFV 530

Query: 242 DTKPRGWTKPSDHTPVIV 259
                      DH P+++
Sbjct: 531 QGVLPKPVL--DHFPILL 546


>gi|323355424|gb|EGA87248.1| Isc1p [Saccharomyces cerevisiae VL3]
          Length = 477

 Score = 50.2 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/268 (13%), Positives = 77/268 (28%), Gaps = 19/268 (7%)

Query: 26  KENNPDIICLQETKTEDK--NFPFETLQSLNYH-IETCGQKSYNGVAILSKYQPIEIVTH 82
           +  + D+I LQE    +              Y  +   G  +  G+AILSK        +
Sbjct: 89  ENEDYDVIALQEIWCVEDWKYLASACASKYPYQRLFHSGILTGPGLAILSKVPIESTFLY 148

Query: 83  LPGDDLDVQARFIEATFTINTQTLRI------------GNLYLPHGNPITSTKYDDKISW 130
               +    A F    +   +  + +             +++ P+     +     +   
Sbjct: 149 RFPINGRPSAVFRGDWYVGKSIAITVLNTGTRPIAIMNSHMHAPYAKQGDAAYLCHRSCQ 208

Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG 190
              F R      +    +I  GD N  P                   ++           
Sbjct: 209 AWDFSRLIKLYRQAGYAVIVVGDLNSRPGSLPHKFLTQEAGLVDSWEQLHGKQDLAVIAR 268

Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR---G 247
            +   +         S  + +      ++  R+D+ ++ P+    +  A +    R    
Sbjct: 269 LSPLQQLLKGCTTCDSLLNTWRAQRQPDEACRLDYALIDPDFLQTV-DAGVRFTERIPHL 327

Query: 248 WTKPSDHTPVIVSLDIPEPRKKQQDSTS 275
               SDH     +L+I     + + STS
Sbjct: 328 DCSVSDHFAYSCTLNIVPXGTESRPSTS 355


>gi|154280320|ref|XP_001540973.1| predicted protein [Ajellomyces capsulatus NAm1]
 gi|150412916|gb|EDN08303.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 473

 Score = 50.2 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 28/75 (37%), Gaps = 8/75 (10%)

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           + W           G  ID   LSP     L    I  +     K SDH P+  +L++  
Sbjct: 100 TTWQDRGSP-----GTTIDLTFLSPLLHDKLRRCAIAEEA---CKGSDHKPIETTLELTP 151

Query: 266 PRKKQQDSTSQNMKP 280
             K+ +    +N +P
Sbjct: 152 IPKEAERRNWKNAEP 166


>gi|154277106|ref|XP_001539398.1| predicted protein [Ajellomyces capsulatus NAm1]
 gi|150414471|gb|EDN09836.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 1315

 Score = 50.2 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 28/75 (37%), Gaps = 8/75 (10%)

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           + W           G  ID   LSP     L    I  +     K SDH P+  +L++  
Sbjct: 467 TTWQDRGSP-----GTTIDLTFLSPLLHDKLRRCAIAEEA---CKGSDHKPIETTLELTP 518

Query: 266 PRKKQQDSTSQNMKP 280
             K+ +    +N +P
Sbjct: 519 IPKEAERRNWKNAEP 533


>gi|154277386|ref|XP_001539534.1| predicted protein [Ajellomyces capsulatus NAm1]
 gi|150413119|gb|EDN08502.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 1390

 Score = 50.2 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 28/75 (37%), Gaps = 8/75 (10%)

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           + W           G  ID   LSP     L    I  +     K SDH P+  +L++  
Sbjct: 467 TTWQDRGSP-----GTTIDLTFLSPLLHDKLRRCAIAEEA---CKGSDHKPIETTLELTP 518

Query: 266 PRKKQQDSTSQNMKP 280
             K+ +    +N +P
Sbjct: 519 IPKEAERRNWKNAEP 533


>gi|154273216|ref|XP_001537460.1| predicted protein [Ajellomyces capsulatus NAm1]
 gi|150415972|gb|EDN11316.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 1306

 Score = 50.2 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 28/75 (37%), Gaps = 8/75 (10%)

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           + W           G  ID   LSP     L    I  +     K SDH P+  +L++  
Sbjct: 467 TTWQDRGSP-----GTTIDLTFLSPLLHDKLRRCAIAEEA---CKGSDHKPIETTLELTP 518

Query: 266 PRKKQQDSTSQNMKP 280
             K+ +    +N +P
Sbjct: 519 IPKEAERRNWKNAEP 533


>gi|154276770|ref|XP_001539230.1| predicted protein [Ajellomyces capsulatus NAm1]
 gi|150414303|gb|EDN09668.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 875

 Score = 50.2 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 28/75 (37%), Gaps = 8/75 (10%)

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           + W           G  ID   LSP     L    I  +     K SDH P+  +L++  
Sbjct: 497 TTWQDRGSP-----GTTIDLTFLSPLLHDKLRRCAIAEEA---CKGSDHKPIETTLELTP 548

Query: 266 PRKKQQDSTSQNMKP 280
             K+ +    +N +P
Sbjct: 549 IPKEAERRNWKNAEP 563


>gi|154281441|ref|XP_001541533.1| predicted protein [Ajellomyces capsulatus NAm1]
 gi|150411712|gb|EDN07100.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 1329

 Score = 50.2 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 28/75 (37%), Gaps = 8/75 (10%)

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           + W           G  ID   LSP     L    I  +     K SDH P+  +L++  
Sbjct: 464 TTWQDRGSP-----GTTIDLTFLSPLLHDKLRRCAIAEEA---CKGSDHKPIETTLELTP 515

Query: 266 PRKKQQDSTSQNMKP 280
             K+ +    +N +P
Sbjct: 516 IPKEAERRNWKNAEP 530


>gi|154278826|ref|XP_001540226.1| predicted protein [Ajellomyces capsulatus NAm1]
 gi|150412169|gb|EDN07556.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 1356

 Score = 50.2 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 28/75 (37%), Gaps = 8/75 (10%)

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           + W           G  ID   LSP     L    I  +     K SDH P+  +L++  
Sbjct: 433 TTWQDRGSP-----GTTIDLTFLSPLLHDKLRRCAIAEEA---CKGSDHKPIETTLELTP 484

Query: 266 PRKKQQDSTSQNMKP 280
             K+ +    +N +P
Sbjct: 485 IPKEAERRNWKNAEP 499


>gi|154286678|ref|XP_001544134.1| predicted protein [Ajellomyces capsulatus NAm1]
 gi|150407775|gb|EDN03316.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 964

 Score = 50.2 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 28/75 (37%), Gaps = 8/75 (10%)

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           + W           G  ID   LSP     L    I  +     K SDH P+  +L++  
Sbjct: 516 TTWQDRGSP-----GTTIDLTFLSPLLHDKLRRCAIAEEA---CKGSDHKPIETTLELTP 567

Query: 266 PRKKQQDSTSQNMKP 280
             K+ +    +N +P
Sbjct: 568 IPKEAERRNWKNAEP 582


>gi|154284902|ref|XP_001543246.1| predicted protein [Ajellomyces capsulatus NAm1]
 gi|150406887|gb|EDN02428.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 1390

 Score = 50.2 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 28/75 (37%), Gaps = 8/75 (10%)

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           + W           G  ID   LSP     L    I  +     K SDH P+  +L++  
Sbjct: 467 TTWQDRGSP-----GTTIDLTFLSPLLHDKLRRCAIAEEA---CKGSDHKPIETTLELTP 518

Query: 266 PRKKQQDSTSQNMKP 280
             K+ +    +N +P
Sbjct: 519 IPKEAERRNWKNAEP 533


>gi|26344421|dbj|BAC35861.1| unnamed protein product [Mus musculus]
          Length = 419

 Score = 50.2 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 42/281 (14%), Positives = 87/281 (30%), Gaps = 33/281 (11%)

Query: 15  RA-RIHNLAAWIKENNPDIICLQETKT-EDKNFPFETLQSLNYHIETCGQKSY--NGVAI 70
           RA R+  L  ++   N D+  L+E  + +D  +  + L SL Y      +     +G+ +
Sbjct: 26  RADRMKRLGDFLNLENFDLALLEEVWSEQDFQYLRQRL-SLTYPDAHYFRSGMIGSGLCV 84

Query: 71  LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI-----------GNLYLPHGNPI 119
            SK+   EI  H+   +           F   +  L +                   +  
Sbjct: 85  FSKHPIQEIFQHVYSLNGYPYMFHHGDWFCGKSVGLLVLRLSGLVLNAYVTHLHAEYSRQ 144

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
               +  +++      +F     +  + ++  GD N+ P+   C     W       +E 
Sbjct: 145 KDIYFAHRVAQAWELAQFIHHTSKNADVVLLCGDLNMHPKDLGCCLLKEWTGLHDAFVET 204

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
              F+   +               L          +    GIRID+++     +      
Sbjct: 205 ED-FKGSDDGCTMVPKNCYVSQQDL--------GPFP--SGIRIDYVLY-KAVSEFHVCC 252

Query: 240 RIDT-----KPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTS 275
                     P      SDH  ++ +L +     ++   T+
Sbjct: 253 ETLKTTTGCDPHSDKPFSDHEALMATLYVKHSPPQEDPCTA 293


>gi|328470709|gb|EGF41620.1| hypothetical protein VP10329_07912 [Vibrio parahaemolyticus 10329]
          Length = 293

 Score = 50.2 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/281 (13%), Positives = 70/281 (24%), Gaps = 32/281 (11%)

Query: 2   SVVTVATWNV-----NSIRARIH-----NLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51
           + + + +WN+     N  +          L  ++ +   DII  QE    D     +   
Sbjct: 25  NSINLTSWNIEWLSINGGKVSRTSDDFVKLNQYVDKTQADIIAFQEV---DSKAAVQKAV 81

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL--RIG 109
              Y I    +   N   +            +  D           T   +       I 
Sbjct: 82  GDGYAIYLSDRAQSNNKHLQFSDTNQYTGFAVRKDIEVSDPADFSITRGNSKLRFASYIV 141

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
                       + +               Q L  +   +         +         +
Sbjct: 142 VNPNQKDELHLLSVHLKAGCSGAYKNSRDCQTLSQQGEALAKWVSEREKKKEQYAVMGDF 201

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
            ++  +  +   +   L N           D             S +      IDHI++S
Sbjct: 202 NHNLSYQRDWLWAIMTLGNDAQLVTRDTQADCKVR----SNKNPSKTHQFRSLIDHIIVS 257

Query: 230 PEATSL------LHSARIDTKPRGWTKPSDHTPV--IVSLD 262
           P+  +         S  +        K SDH PV   V+L+
Sbjct: 258 PQIKAKNAHQTLFSSQDVLDY-----KLSDHCPVNATVTLN 293


>gi|298481016|ref|ZP_06999211.1| transmembrane endonuclease/exonuclease/phosphatase [Bacteroides sp.
           D22]
 gi|298273039|gb|EFI14605.1| transmembrane endonuclease/exonuclease/phosphatase [Bacteroides sp.
           D22]
          Length = 365

 Score = 50.2 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 45/272 (16%), Positives = 81/272 (29%), Gaps = 33/272 (12%)

Query: 3   VVTVATWNVNSIR------ARIHNLAAWIKENNPDIICLQETKTEDK---NFPFETLQSL 53
           V+TVAT+NV++        +    +A++++    DI+C QE    D+   +     L + 
Sbjct: 109 VLTVATYNVDAFNHEHTGYSC-KEIASYMRNLQADILCFQEFGINDEFGIDSISAALSNW 167

Query: 54  NYHIETCGQKSYNGV------AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107
            YH      +  N +          K + + I        L         T  +    L+
Sbjct: 168 PYHYIPSSPEGKNLLQLAVFSRYPIKEEHLIIYPDSKNCSLACDIEINGRTIRLFNNHLQ 227

Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167
              +           + DD        L       E  +      D          Y  +
Sbjct: 228 TTEVSQNKRKLEKGLRTDDSQRVEHAALGLIDGLHENFQKRAVQADLLKQLIAASPYPTL 287

Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227
           +   D               +       R+ H   + + ++            +RID+I+
Sbjct: 288 V-CGDFNSLPSSYVYHTIKGDKLQDGFQRSGHGYMYTFKYF---------KHLLRIDYIL 337

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
            SPE  S                 SDH PV++
Sbjct: 338 HSPELNST-------DYFSPDLNYSDHNPVVM 362


>gi|255691864|ref|ZP_05415539.1| transmembrane endonuclease/exonuclease/phosphatase family protein
           [Bacteroides finegoldii DSM 17565]
 gi|260622589|gb|EEX45460.1| transmembrane endonuclease/exonuclease/phosphatase family protein
           [Bacteroides finegoldii DSM 17565]
          Length = 378

 Score = 50.2 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 44/286 (15%), Positives = 92/286 (32%), Gaps = 41/286 (14%)

Query: 3   VVTVATWNVNSIR------ARIHNLAAWIKENNPDIICLQETKTEDK-NFPF--ETLQSL 53
           ++TVAT+NV++        +    +A  ++    DI+CLQE       N         + 
Sbjct: 109 ILTVATYNVDAFNHEYMGYSC-KGIATQMQNLQADILCLQEVGINSSFNIDSVCAAFSNW 167

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
            Y            +  L+ +    I         D +   +     I  +T+R+ N +L
Sbjct: 168 PYQ-YVPSAPEGKELLQLAVFSRYPIREQSLITYPDSKNCSLWCDIEIPGRTIRLFNNHL 226

Query: 114 PHGNPITSTKYDDKISWIKRFLR------------FASQRLELEEPLIFAGDYNIIPQPH 161
                  + +  +K  + +   +              + R    +  +        P P 
Sbjct: 227 QTTEVTRNKRELEKELYKEDTQKAERAALTLIDGLHENFRKRAGQADVLKQLIADSPHPT 286

Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH----DTHHLYSFWDYYADSWSK 217
                      +     ++   +  +                   ++Y+F       + K
Sbjct: 287 LVCGDFNSLPSSYVYHTIKGDKKGDKKGNKKGNKLQDGFQTSGHGYMYTF------KFFK 340

Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +  +RID+++ SPE  S       D     W+  SDH PV++ + +
Sbjct: 341 HL-LRIDYVLHSPELKST------DYFSPDWSY-SDHNPVVMRMKL 378


>gi|323343527|ref|ZP_08083754.1| AP endonuclease domain protein [Prevotella oralis ATCC 33269]
 gi|323095346|gb|EFZ37920.1| AP endonuclease domain protein [Prevotella oralis ATCC 33269]
          Length = 361

 Score = 50.2 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/247 (13%), Positives = 67/247 (27%), Gaps = 25/247 (10%)

Query: 22  AAWIKENNPDIICLQE------TKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75
             +I E N DI+CLQE       K +  +           +      +  +G  +L+ Y 
Sbjct: 123 LQFIAEQNADIVCLQEAEGWGIYKAKADSV------MNGLYQYADTSRRKDGGDVLAIYS 176

Query: 76  PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKIS---WIK 132
              I+                    IN  T+ + N +          K + K      + 
Sbjct: 177 KYPIIKKERIVYPSKTNHSAAFYLKINGDTVIVINNHFESIGLSPEDKTNFKEMVKGDMN 236

Query: 133 RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192
                   +  +++    +            Y             +              
Sbjct: 237 AKCVEKESKKLIDKLAEASKRRAPQVDAVAQYIYEHKRMSMILCGDFNDGPLSYTRRIMA 296

Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPS 252
            ++   +          Y+   +     +RID+IM S +        ++D +     K S
Sbjct: 297 KSLTDCYVESGNGIGISYHHGGFY----VRIDNIMCSNDWVPY--GCKVDNRV----KSS 346

Query: 253 DHTPVIV 259
           DH P+  
Sbjct: 347 DHYPIYC 353


>gi|225440718|ref|XP_002275102.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 1169

 Score = 50.2 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/263 (13%), Positives = 80/263 (30%), Gaps = 38/263 (14%)

Query: 4   VTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           + +  WNV  +     R  I  +   ++    D++CL ETK +D                
Sbjct: 3   IKILCWNVRGLHDCDKRKLIKGV---VRNQKADLVCLLETKVKD---------------V 44

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA-TFTINTQTLRIGNLYLPHGN 117
           +    +  GV     +  ++      G  L    R +E         ++ +       G 
Sbjct: 45  STQLVNSVGVGRFLNWASVDARGTAGGLLLIWDNRVLENLEVESGGYSISVRFRNCSDG- 103

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
                 +    S +   +  + +    EE     G +         +N + +  +     
Sbjct: 104 ------FSWIFSGVYGPVIGSEKEDFWEELGAIRGLWEDPWCIGGDFNAVRYPEERRNAP 157

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
            +    ++   +     +R        +++        +     R+D  ++S +      
Sbjct: 158 RLTADMRRFSEVIGELGLRDIPLAGGPFTW----IGGLNSQAASRLDRFLISDQWEDHFS 213

Query: 238 SARIDTKPRGWTKPSDHTPVIVS 260
           +      PR     SDH+P+I+ 
Sbjct: 214 AISQSALPR---LVSDHSPIILE 233


>gi|302404834|ref|XP_003000254.1| endonuclease/exonuclease/phosphatase family protein [Verticillium
           albo-atrum VaMs.102]
 gi|261360911|gb|EEY23339.1| endonuclease/exonuclease/phosphatase family protein [Verticillium
           albo-atrum VaMs.102]
          Length = 298

 Score = 50.2 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/286 (11%), Positives = 72/286 (25%), Gaps = 28/286 (9%)

Query: 4   VTVATWNV---------N--SIRARIHNL---AAWIKE-NN-PDIICLQETKTEDKNFPF 47
           V V T+NV         N  S + R   +     +I   ++ P  +CLQE     +    
Sbjct: 15  VRVVTFNVRYAAPRPMPNEKSWQVRCPKICTQLDFITRGHDSP-FLCLQEV-LYPQLLDI 72

Query: 48  ETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT---- 103
           +      +     G+   + +  LS                   +   +           
Sbjct: 73  QAGLGEGWGYVGIGRDDGDRLGELSPVFYRVGTWKCEVFKNYWLSETPDRPSKGWDAALP 132

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
           + + +G                            +++ +            +  P     
Sbjct: 133 RIVTVGEFVHKRTGQRAVVMSTHFDHLGVVAREQSAKLILRIAAQWAEERASSPPAAVIL 192

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223
                          +      + +          +     Y+ +D         + +RI
Sbjct: 193 GGDFNSNPSDNAYKSMVAKGSGMADAHALVPSEKRYGNELTYTSFD-----EPDQQAVRI 247

Query: 224 DHIMLSPEATSLLHSARIDTKPRG-WTKPSDHTPVIVSLDIPEPRK 268
           D I +   +   + +  + T         SDH PV+  L++   + 
Sbjct: 248 DFIFVKVPSNVKVTTFGVLTNRFDDGVFLSDHRPVVADLEVRAAKD 293


>gi|154272351|ref|XP_001537028.1| predicted protein [Ajellomyces capsulatus NAm1]
 gi|150409015|gb|EDN04471.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 1753

 Score = 50.2 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/278 (13%), Positives = 76/278 (27%), Gaps = 44/278 (15%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKE---NNPDIICLQETKTEDKNFP-FETLQSLNYHIET 59
           + +  +NV   ++R   LA+  +     + DI+ +QE        P        +YH   
Sbjct: 486 LRILQYNV--WKSRDVVLASLFQNRKILDYDILAIQE--------PWRNPFIETSYHPLK 535

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
              +        ++          PG               I+   + +  L    G  +
Sbjct: 536 AQFQLTYLANAATRVCLYISKRINPGTWSVSY---------ISKDIISLQILNPHSGRKV 586

Query: 120 TSTK-YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
           +    Y++  +     +  A + L   E +I  GD+N+        +             
Sbjct: 587 SVFNVYNEVGTDTLSTMAEAIRALNSPEDIIVLGDFNLHHPLWSSTHRHGGRG-----PS 641

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
            +     ++             TH              K+    ID    S +    +  
Sbjct: 642 AQGLLTVIEEFQLQLLTEPGTPTH------------RWKDGESTIDLTFASEDLADRVTH 689

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQ 276
            ++D +       SDH P+ +  D              
Sbjct: 690 CKVDREV---DCDSDHLPIALVFDWNWQPVNPTRKRLW 724


>gi|119386766|ref|YP_917821.1| endonuclease/exonuclease/phosphatase [Paracoccus denitrificans
           PD1222]
 gi|119377361|gb|ABL72125.1| Endonuclease/exonuclease/phosphatase [Paracoccus denitrificans
           PD1222]
          Length = 260

 Score = 50.2 bits (118), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/274 (10%), Positives = 57/274 (20%), Gaps = 54/274 (19%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQETK----TEDKNFPFETLQSLN 54
           + +A++N++  R              I E   D+I LQE         +  P   ++   
Sbjct: 8   LRLASYNLHKCRGMTGPHAPERNLRVIAELGADVIALQEVDFRFGARPEALPRALIEK-- 65

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
                           +     +    +  G          E       + L +  +   
Sbjct: 66  -------------TTGMVPAPFLGTGENSLGWHGQTILLRPELRGKAEIRRLPLPGIEPR 112

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
               +           +         +L      I A    I              +D+ 
Sbjct: 113 GALVLRLPGITVVAVHLGLMRSSRRAQLSR----IIAQARRIGHDRMALTGDFNEWHDSR 168

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
               +           +                             +R D   +S     
Sbjct: 169 GLEALEALRVVTPGPSWPAPFPR-----------------------LRYDRFAVSRSIE- 204

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268
            +    +          SDH PV   L +    +
Sbjct: 205 -VLDCGVLDNEMARA-ASDHLPVWADLAVDAHEE 236


>gi|164448715|ref|NP_001068851.2| sphingomyelin phosphodiesterase 2, neutral [Bos taurus]
 gi|296484135|gb|DAA26250.1| sphingomyelin phosphodiesterase 2, neutral [Bos taurus]
          Length = 423

 Score = 50.2 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 45/301 (14%), Positives = 85/301 (28%), Gaps = 45/301 (14%)

Query: 4   VTVATWNVNSI------RA-RIHNLAAWIKENNPDIICLQETKTEDK--NFPFETLQSLN 54
           + V   N   I      RA R+  L  ++   + D+  L+E  +E        + L +  
Sbjct: 9   LRVFNLNCWGIPYLSKHRADRVKRLGDFLNMESFDLALLEEVWSEQDFQYLRQKLLPTYP 68

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN---- 110
                      +G+ + SK+   E   H+   +           F      L + +    
Sbjct: 69  AAHYFRSGIIGSGLCVFSKHPIQEFTQHVFTLNGYPYMIHHCDWFCGKAVGLLVLHLSGL 128

Query: 111 -------LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                        N    T    +++      +F     +  + ++  GD N+ P+   C
Sbjct: 129 VLNAYVTHLHAEYNRQKDTYLAHRVAQAWELAQFIHHTSKKADVVLLCGDLNLHPKDLGC 188

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223
                W       LE R  F+  +                L          +    GIRI
Sbjct: 189 RLLKEWTGLHDAYLETRD-FKGSEEGCTMVPKNCYVKHQEL--------GPFP--LGIRI 237

Query: 224 DHIMLSPEATSLLHSARID---------TKPRGWTKPSDHTPVIVSLDIPEPRKKQQDST 274
           D++         +    I            P      SDH  ++ +L +     +   S 
Sbjct: 238 DYV-----LYKAVSGLYIFCKTFKTTTGHDPYSGPPFSDHEALMATLCVRHSPPQHNPSP 292

Query: 275 S 275
           +
Sbjct: 293 T 293


>gi|170760014|ref|YP_001787009.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum A3 str. Loch Maree]
 gi|169407003|gb|ACA55414.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum A3 str. Loch Maree]
          Length = 263

 Score = 50.2 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 41/268 (15%), Positives = 81/268 (30%), Gaps = 13/268 (4%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYHI 57
           + + T N +S +      +I  LA  I ENN D+I LQE  ++ +    F+ ++  N+  
Sbjct: 1   MKILTLNCHSWQEEKQLEKIKYLAKVIYENNYDVIALQEVSQSINSKILFDNIKEDNFAF 60

Query: 58  E-TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFI-EATFTINTQTLRIGNLYLPH 115
                 +          +    I      + L +  +   +   +      +  N +   
Sbjct: 61  ILIKELEKLGENRFKILWDFAHIGYDKYEEGLAILTKHSVKEKDSFYISKSKDKNFWKAR 120

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
                   Y +K   +           E +           + Q   C     + NDA  
Sbjct: 121 KIIKCKIFYKNKPILVYSCHLGWWDDKEEDFKFQANKLIEDLKQDETCILMGDFNNDAFL 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
                + +  L N  F D         +  +            K +R+D I+ +      
Sbjct: 181 ---NYRGYDYLINKNFKDIYHLAKSKDNGVTVIGDIDGWKENTKNMRLDLILSNKNL--K 235

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +   ++          SDH  V   ++I
Sbjct: 236 VEYCKVIFNGIRKEIISDHFGVEAKIEI 263


>gi|170033629|ref|XP_001844679.1| sphingomyelin phosphodiesterase 2 [Culex quinquefasciatus]
 gi|167874647|gb|EDS38030.1| sphingomyelin phosphodiesterase 2 [Culex quinquefasciatus]
          Length = 423

 Score = 50.2 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 47/287 (16%), Positives = 81/287 (28%), Gaps = 38/287 (13%)

Query: 1   MSV-VTVATWNVNSI------RA-RIHNLAAWIKENNPDIICLQETKTEDK--NFPFETL 50
           M++ +++ T N+  I      RA R+  +   +   N DI+ LQE  +E           
Sbjct: 1   MALELSILTLNIWGIPYVSKDRAVRVEAIGEVLASGNYDIVSLQEVWSESDYRYLKERAA 60

Query: 51  QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL---- 106
            +L +          +G+A+LSKY  +    H    +  V        F           
Sbjct: 61  AALPFAHYFYSGVVGSGLAVLSKYPIVSAFFHAWSVNGYVHRIQHGDWFGGKGVGFVKIS 120

Query: 107 -------RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159
                            +         ++       +F           + AGD N  P 
Sbjct: 121 VNEQLVHVYAAHLHAEYDRSCDDYMAHRVIQAYDTAQFIENTQGNGVLQVLAGDLNTEPG 180

Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK 219
                        +  T    +      ++   +  R ++              +    K
Sbjct: 181 DLAYRVLQTC---SRLTDSADKKMYASGDLNTNEIARNSYTDPEA---------AKKSPK 228

Query: 220 GIRIDHIM--LSPEATSLLHSARI---DTKPRGWTKPSDHTPVIVSL 261
           G RID+IM          L   R+   D  P      SDH  V   +
Sbjct: 229 GKRIDYIMYRFGSHYEGKLLEHRLPLPDRIPGKDISYSDHEAVYAKI 275


>gi|91224719|ref|ZP_01259980.1| hypothetical protein V12G01_08258 [Vibrio alginolyticus 12G01]
 gi|91190607|gb|EAS76875.1| hypothetical protein V12G01_08258 [Vibrio alginolyticus 12G01]
          Length = 287

 Score = 50.2 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/277 (10%), Positives = 80/277 (28%), Gaps = 28/277 (10%)

Query: 2   SVVTVATWNV-----NSIR-ARIHN----LAAWIKENNPDIICLQET-KTEDKNFPFETL 50
           + + + +WN+     +  + +R       L  ++ +   DI+  QE  +           
Sbjct: 20  NSINLTSWNIEWLSIDGGKVSRTPQDFEKLTHYVDKTQADILAFQEVERAAAIQ------ 73

Query: 51  QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
           +++            N      ++      T     +        + + T     LR  +
Sbjct: 74  KAVGNDFTIYLSDRSNASNRHLQFNDTNQYTGFAVRNGVSVLDKPDFSITRGNSKLRFAS 133

Query: 111 LYLPHGNPITSTKY--DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168
             + + N    T        +      R       +++       +    + +  +  ++
Sbjct: 134 YLVLNPNQENETHLLSVHLKAGCSGAYRNNRDCKIVKQQGQALAKWIKAREDNKQHYVVL 193

Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
            + +     +    +  + +      +                  + +      IDHI+ 
Sbjct: 194 GDFNHNLGYQGDWLWDVISDNTSAKLVTKDTKAECKVR--SNRNPNKTHQFRSVIDHIIA 251

Query: 229 SPEATSLLHSARIDTKPRGWT----KPSDHTPVIVSL 261
           S +  +   S+ + T  +       K SDH PV  +L
Sbjct: 252 SGDLKA---SSGVQTVFKTQDVLDYKLSDHCPVSTTL 285


>gi|326915191|ref|XP_003203903.1| PREDICTED: LOW QUALITY PROTEIN: protein angel homolog 2-like
           [Meleagris gallopavo]
          Length = 553

 Score = 50.2 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/108 (16%), Positives = 35/108 (32%), Gaps = 5/108 (4%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73
           R  N+   IK+ + D++CLQE   ++ ++  E    L+SL YH E   +           
Sbjct: 207 RFPNILQEIKQLDADVLCLQEV--QEDHYRKEIKSSLESLGYHCEYKMRTGSKPDGCAIC 264

Query: 74  YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           ++  +            +              L +   +    N    
Sbjct: 265 FKTSKFRLISSNPVEFFRRDIPLLDRDNVGLVLLLQPKFPCKTNAAIC 312


>gi|6678031|ref|NP_033239.1| sphingomyelin phosphodiesterase 2 [Mus musculus]
 gi|20138887|sp|O70572|NSMA_MOUSE RecName: Full=Sphingomyelin phosphodiesterase 2; AltName:
           Full=Lyso-platelet-activating factor-phospholipase C;
           Short=Lyso-PAF-PLC; AltName: Full=Neutral
           sphingomyelinase; Short=N-SMase; Short=nSMase
 gi|3021480|emb|CAA10994.1| neutral Sphingomyelinase [Mus musculus]
 gi|15012139|gb|AAH10978.1| Sphingomyelin phosphodiesterase 2, neutral [Mus musculus]
 gi|148673028|gb|EDL04975.1| sphingomyelin phosphodiesterase 2, neutral, isoform CRA_b [Mus
           musculus]
          Length = 419

 Score = 50.2 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 42/281 (14%), Positives = 87/281 (30%), Gaps = 33/281 (11%)

Query: 15  RA-RIHNLAAWIKENNPDIICLQETKT-EDKNFPFETLQSLNYHIETCGQKSY--NGVAI 70
           RA R+  L  ++   N D+  L+E  + +D  +  + L SL Y      +     +G+ +
Sbjct: 26  RADRMKRLGDFLNLENFDLALLEEVWSEQDFQYLRQRL-SLTYPDAHYFRSGMIGSGLCV 84

Query: 71  LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI-----------GNLYLPHGNPI 119
            SK+   EI  H+   +           F   +  L +                   +  
Sbjct: 85  FSKHPIQEIFQHVYSLNGYPYMFHHGDWFCGKSVGLLVLRLSGLVLNAYVTHLHAEYSRQ 144

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
               +  +++      +F     +  + ++  GD N+ P+   C     W       +E 
Sbjct: 145 KDIYFAHRVAQAWELAQFIHHTSKNADVVLLCGDLNMHPKDLGCCLLKEWTGLHDAFVET 204

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
              F+   +               L          +    GIRID+++     +      
Sbjct: 205 ED-FKGSDDGCTMVPKNCYVSQQDL--------GPFP--SGIRIDYVLY-KAVSEFHVCC 252

Query: 240 RIDT-----KPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTS 275
                     P      SDH  ++ +L +     ++   T+
Sbjct: 253 ETLKTTTGCDPHSDKPFSDHEALMATLYVKHSPPQEDPCTA 293


>gi|325838966|ref|ZP_08166749.1| endonuclease/exonuclease/phosphatase family protein [Turicibacter
           sp. HGF1]
 gi|325490621|gb|EGC92933.1| endonuclease/exonuclease/phosphatase family protein [Turicibacter
           sp. HGF1]
          Length = 254

 Score = 50.2 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 35/265 (13%), Positives = 76/265 (28%), Gaps = 29/265 (10%)

Query: 4   VTVATWNV-----NSIRARIHNLAAW---IKENNPDIICLQETKTEDKNFPFETLQSLNY 55
           + + T+N+     + +    + ++     IK   PD+I  QE    + +      Q  +Y
Sbjct: 5   LKIVTFNLRITVDDGLNVWENRVSHVVHKIKSEAPDLIGFQE--LTEISLRDLKRQLTDY 62

Query: 56  -HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
             +     +  +G  ++  Y   ++              +   +        R  N+ + 
Sbjct: 63  VFVGCGRDEQMSGEMVMIAYNKNKLDLMSLDIFWFSDTPYKPGSKKEMMTLARPCNVAVF 122

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
                                      + ++       D ++  Q       I+ + ++ 
Sbjct: 123 KNQLTNQIFRVYNT-----HYDHMQSSIRVQSSEQLLNDLHLREQNISLPTLIMGDMNSE 177

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
              E  ++    + +   D           Y+F DY      K     ID+I  +     
Sbjct: 178 PQDEEIKAIVNNEIIELNDLTDKLD-----YTFHDY-GKIKIK-----IDYIFATKSV-- 224

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIV 259
               A            SDH PV+V
Sbjct: 225 NASKAVAWADCFDGVYLSDHYPVMV 249


>gi|313207216|ref|YP_004046393.1| endonuclease/exonuclease/phosphatase [Riemerella anatipestifer DSM
           15868]
 gi|312446532|gb|ADQ82887.1| Endonuclease/exonuclease/phosphatase [Riemerella anatipestifer DSM
           15868]
 gi|315022982|gb|EFT36003.1| endonuclease/exonuclease/phosphatase [Riemerella anatipestifer
           RA-YM]
 gi|325335338|gb|ADZ11612.1| Metal-dependent hydrolase [Riemerella anatipestifer RA-GD]
          Length = 286

 Score = 50.2 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 37/269 (13%), Positives = 86/269 (31%), Gaps = 28/269 (10%)

Query: 4   VTVATWNV------NSIRARIHNLAA---WIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           + + T+N+      + +    + +      ++   PDII  QE    ++    +T+   +
Sbjct: 25  LKLMTFNIRYDNPDDGLNVWRNRILNTKNLLEFYIPDIIGFQEV-LPNQYLDLKTILP-S 82

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           Y+  + G+ S N       +        L      +     + +        RI +  + 
Sbjct: 83  YNSYSLGRDSENQGEACPLFFNKNRFELLDSGTFWLSPTPNKISKAWGANLNRICSWVML 142

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
             N   ST     + +           L L +  I            + Y  ++ + +  
Sbjct: 143 KDNISKSTLKIYNLHFDHESELSRKNSLALIQEYINKDR------EQNIYTLVMGDFNTT 196

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI--RIDHIMLSPEA 232
           F+ +             +   + T   +  +        ++ K  G   RID+I +  + 
Sbjct: 197 FSNQELLQQVLPPLAEASTLAKKTLLNNGTF-------QAFGKKVGQSPRIDYIFVPKD- 248

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
            + +   +I +       P DH PV+  +
Sbjct: 249 -TEVLQYQILSNQFYGQYPYDHFPVLTEI 276


>gi|262037299|ref|ZP_06010773.1| metal-dependent hydrolase [Leptotrichia goodfellowii F0264]
 gi|261748682|gb|EEY36047.1| metal-dependent hydrolase [Leptotrichia goodfellowii F0264]
          Length = 263

 Score = 50.2 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 41/271 (15%), Positives = 83/271 (30%), Gaps = 19/271 (7%)

Query: 4   VTVATWNVNSIRARIHN--------LAAWIKENNPDIICLQET-KTEDKNFPFETLQSLN 54
           + + T NV+   A I          LA  I EN+ D+I +QE  ++ +    F  ++  N
Sbjct: 1   MKLLTINVH---AWIEENQDEKMEILAKVIAENDYDVIAMQEVNQSMNSLVLFRAIRQDN 57

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           Y      + S         +     + +   D+        +          R  ++   
Sbjct: 58  YGWVLLDKISKYTDRTYYYHWSNSHIGYDKYDEGLAIITKHKLLDVDEFYCTRAQSVNTI 117

Query: 115 HGNPITSTKYDD--KISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
               I S   +   +I              E +               +       +  D
Sbjct: 118 TSRRINSATIEYKGQIMEFYTCHMNLPTNKEEKMSDNIQRILKRSQTDNLKILMGDFNTD 177

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
           A  + E    ++ + + G  D   A  +     +            +  RID+I  + + 
Sbjct: 178 AINSPED---YKMILSQGLYDTYTAAIEKDSGITVGGNIDGWSKNKEDKRIDYIFSNKKI 234

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              + S+++    +     SDH  + V LD+
Sbjct: 235 --KVLSSKVIFNGKNHPVVSDHYGLEVILDM 263


>gi|260365700|ref|ZP_05778214.1| metal-dependent hydrolase [Vibrio parahaemolyticus K5030]
 gi|260896112|ref|ZP_05904608.1| metal-dependent hydrolase [Vibrio parahaemolyticus Peru-466]
 gi|308094717|ref|ZP_05891469.2| metal-dependent hydrolase [Vibrio parahaemolyticus AN-5034]
 gi|308126490|ref|ZP_05910491.2| metal-dependent hydrolase [Vibrio parahaemolyticus AQ4037]
 gi|308088090|gb|EFO37785.1| metal-dependent hydrolase [Vibrio parahaemolyticus Peru-466]
 gi|308090251|gb|EFO39946.1| metal-dependent hydrolase [Vibrio parahaemolyticus AN-5034]
 gi|308109923|gb|EFO47463.1| metal-dependent hydrolase [Vibrio parahaemolyticus AQ4037]
 gi|308111792|gb|EFO49332.1| metal-dependent hydrolase [Vibrio parahaemolyticus K5030]
          Length = 288

 Score = 50.2 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 41/279 (14%), Positives = 76/279 (27%), Gaps = 28/279 (10%)

Query: 2   SVVTVATWNV-----NSIRARIH-----NLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51
           + + + +WN+     N  +          L  ++ +   DII  QE    D     +   
Sbjct: 20  NSINLTSWNIEWLSINGGKVSRTSDDFVKLNQYVDKTQADIIAFQEV---DSKAAVQKAV 76

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
              Y I    +   N      ++      T          +   + + T     LR  + 
Sbjct: 77  GDGYAIYLSDRAQSNN--KHLQFSDTNQYTGFAVRKDIEVSDPADFSITRGNSKLRFASY 134

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
            + + +                   + + R               + +            
Sbjct: 135 IVVNPSQKDELHLLSVHLKAGCSGAYKNSRDCQTLSQQGEALAKWMSEREKKKEQYAVMG 194

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
           D    L  ++ +         DA   T DT            S +      IDHI++SP+
Sbjct: 195 DFNHNLSYQRDWLWAIMTLGNDAQLVTRDTQADCKVRSNKNPSKTHQFRSLIDHIIVSPQ 254

Query: 232 ATSL------LHSARIDTKPRGWTKPSDHTPV--IVSLD 262
             +         S  +        K SDH PV   V+L+
Sbjct: 255 IKAKNAHQTLFSSQDVLDY-----KLSDHCPVNATVTLN 288


>gi|321466080|gb|EFX77077.1| hypothetical protein DAPPUDRAFT_305861 [Daphnia pulex]
          Length = 358

 Score = 50.2 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/277 (12%), Positives = 70/277 (25%), Gaps = 49/277 (17%)

Query: 5   TVATWNVNSI-----RARIHNLAAWIKENNPDIICLQET--KTED---KNFPFETLQSLN 54
            + +WN++ +     + R  ++   I+ +NPD++ LQE   KT D    N P        
Sbjct: 110 RMISWNIDGLDDRNLKMRTKSVVKIIQTHNPDVVFLQEVIPKTLDYLENNLPQFKF---- 165

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT----LRIGN 110
                    + +G   ++      I                     +        L++ N
Sbjct: 166 ------IPGNVDGYFTVTMLNMFTIHYDSHEIIDFPATTMGRNLLKVEAHMGPLKLKLLN 219

Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170
            ++         + +          R       +    +   D  +              
Sbjct: 220 THMESTGEHADERMNQLNISFHELSRTDKSVNVIMGGDLNMRDKELATVGGLPDLTYDLW 279

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML-- 228
                  E + ++   +N       +                         R D I L  
Sbjct: 280 EACGSRKECQWTWDITRNTNKDFPGKFKPRC--------------------RFDRIYLRP 319

Query: 229 --SPEATSLLHSARIDTKPRGWT-KPSDHTPVIVSLD 262
             S  A           K  G+   PSDH  ++   D
Sbjct: 320 ATSTSAVPKFFGLIGLQKISGYQCFPSDHWGLLADFD 356


>gi|270015323|gb|EFA11771.1| hypothetical protein TcasGA2_TC004098 [Tribolium castaneum]
          Length = 1336

 Score = 50.2 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 17/34 (50%)

Query: 9   WNVNSIRARIHNLAAWIKENNPDIICLQETKTED 42
           WN N +RA    L  ++     DI+ + ETK + 
Sbjct: 493 WNANGLRAARDELEEFVDRLQLDIVLVCETKLQP 526


>gi|154269638|ref|XP_001535769.1| hypothetical protein HCAG_09311 [Ajellomyces capsulatus NAm1]
 gi|150411145|gb|EDN06533.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 266

 Score = 50.2 bits (118), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 28/75 (37%), Gaps = 8/75 (10%)

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           + W           G  ID   LSP     L    I  +     K SDH P+  +L++  
Sbjct: 84  TTWQDRGSP-----GTTIDLTFLSPLLHDKLRRCAIAEEA---CKGSDHKPIETTLELTP 135

Query: 266 PRKKQQDSTSQNMKP 280
             K+ +    +N +P
Sbjct: 136 IPKEAERRNWKNAEP 150


>gi|73951376|ref|XP_851047.1| PREDICTED: similar to LINE-1 reverse transcriptase homolog [Canis
           familiaris]
          Length = 1402

 Score = 49.8 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 40/110 (36%), Gaps = 12/110 (10%)

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
               + E R     L  M FTD  R  H     Y+F+     ++S     RIDHI+    
Sbjct: 285 KQNISKETRALNDTLDQMDFTDIYRTLHPNSTEYTFFSSAHGTFS-----RIDHILGHKS 339

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
             +      I          SDH  + + L+    +K  + S +  ++ I
Sbjct: 340 GLNRYQKIGIVPCI-----FSDHNALKLELN--HNKKFGRTSNTWRLRTI 382


>gi|302346017|ref|YP_003814370.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           melaninogenica ATCC 25845]
 gi|302149189|gb|ADK95451.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           melaninogenica ATCC 25845]
          Length = 355

 Score = 49.8 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 41/268 (15%), Positives = 82/268 (30%), Gaps = 22/268 (8%)

Query: 4   VTVATWNVNSIRA-----RIHN-LAAWIKENNPDIICLQETKTE--DKNFPFETLQSLNY 55
           + V ++NV    +        N +  +I ++  DI+CLQE +    DK+  + TL+    
Sbjct: 90  IKVLSYNVFMFSSWSEPDAKKNPIVDYIVKSKADIVCLQEAQATLDDKDHIYSTLKKHYP 149

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
           + +   +K+     ++   +   +                       T TL + N +  +
Sbjct: 150 YFKLMIKKAPGADYMVLLSKYPVLWQDTIPYGSSSNQSVAYMLDIKGTNTLVVNNHFESN 209

Query: 116 G-NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
           G +      +   +    +      Q + L   L                    + +   
Sbjct: 210 GLSSGDKEGFKTLVKGELKTGEAKRQSVHLITKLGDVSARRAPQAETVARYVKKYLDKKV 269

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK-GI--RIDHIMLSPE 231
             +          +       +  +D               S +K G+  RIDHI  S +
Sbjct: 270 PVILCGDFNDSPLSYTHRTIAKELNDCFVE----SGNGPGISYHKSGMYFRIDHIFCSDD 325

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIV 259
             S    A++D         SDH P+  
Sbjct: 326 FDSY--GAKVDNSVTT----SDHYPIYC 347


>gi|290991312|ref|XP_002678279.1| endonuclease/exonuclease/phosphatase family protein [Naegleria
           gruberi]
 gi|284091891|gb|EFC45535.1| endonuclease/exonuclease/phosphatase family protein [Naegleria
           gruberi]
          Length = 378

 Score = 49.8 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 41/297 (13%), Positives = 74/297 (24%), Gaps = 43/297 (14%)

Query: 5   TVATWNV------NSIRARIHNLAAWIK-----ENNPDIICLQE---TKTEDKNF--PFE 48
              T+N+      N  +  +  L  ++          DII L E   +K        P  
Sbjct: 81  KCCTYNIHVFKSGNG-QTTLDKLIDYLTVGQIGSKPFDIIGLNEAFESKYRRGQILTPLN 139

Query: 49  TLQ---------SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF 99
            +Q             +     +   N        +  +      G         ++   
Sbjct: 140 EIQKSLTKYYGTEYKCYYAPTCKTMGNCFITALPVKKTQTWRLAKGPGGVRNVLGLQLDL 199

Query: 100 TINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159
                 +    L                                 +   +  GD+N + +
Sbjct: 200 EKCKSPVEYFFLTHLDFINEEWRVKQFSQILEFMEKFMRQSFNTKDNNFVMMGDFNAMYK 259

Query: 160 P------HDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY-SF----- 207
                   D       +      +                 I+       LY ++     
Sbjct: 260 NDYTQEFWDQIQMDRMQEQWEPAVSTLMDILLGDIKDERLPIQKNLKCEKLYDTWRMCNK 319

Query: 208 ---WDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
              ++    S S+ K  RID+I+ S   +  +  + IDTK    T  SDH PVI   
Sbjct: 320 ELQFNGRNLSSSRLK-TRIDYILCSKSLSKNVLHSCIDTKS-KTTSISDHNPVITHF 374


>gi|153839235|ref|ZP_01991902.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus
           AQ3810]
 gi|149747230|gb|EDM58218.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus
           AQ3810]
          Length = 434

 Score = 49.8 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 41/283 (14%), Positives = 81/283 (28%), Gaps = 43/283 (15%)

Query: 4   VTVATWNVNSIRA-------RIHNLAAWIKENNPDIICLQETKTE-DKNFPFETLQSLNY 55
           + + T+N+ ++ A       R   +  ++K    D++ LQE        F  E  +   Y
Sbjct: 170 LKLMTYNIWALPAIASHIGDRYELIPDYVK--GYDVLALQEVFASGRDAFLRELAKDYPY 227

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
             +   +  +N             + +         +               I      H
Sbjct: 228 QTKMLDKDDFNVYDGGVVIVSRYPIVNEAQYVFPDCSGTDCFADKGVNYAEIIKGGQAYH 287

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
                +  +D   +   R  +F   R         A   NI       Y+     N    
Sbjct: 288 VFATHTASFDTDTAREYRQRQFQQMR-------TMAQSLNIPNNETVVYSGDFNVNK--- 337

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYS--FWDYYADSWS-------KNKGIRIDHI 226
                              + A    +  Y+   +D   ++++       +N    +D++
Sbjct: 338 ------LKFPGDYQQMIANLSAMEPQYSGYTASTFDPRINNFAGEALSGGENVEY-LDYV 390

Query: 227 MLSPEA-TSLLHSARID---TKPRGWTKP---SDHTPVIVSLD 262
           M+S E      +  R+D   +   G  K    SDH PV   + 
Sbjct: 391 MVSNEYGVKSFNDNRVDVPRSTAEGLWKHYNLSDHFPVSAVIK 433


>gi|28900797|ref|NP_800452.1| hypothetical protein VPA0942 [Vibrio parahaemolyticus RIMD 2210633]
 gi|28809243|dbj|BAC62285.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633]
          Length = 293

 Score = 49.8 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 41/279 (14%), Positives = 76/279 (27%), Gaps = 28/279 (10%)

Query: 2   SVVTVATWNV-----NSIRARIH-----NLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51
           + + + +WN+     N  +          L  ++ +   DII  QE    D     +   
Sbjct: 25  NSINLTSWNIEWLSINGGKVSRTSDDFVKLNQYVDKTQADIIAFQEV---DSKAAVQKAV 81

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
              Y I    +   N      ++      T          +   + + T     LR  + 
Sbjct: 82  GDGYAIYLSDRAQSNN--KHLQFSDTNQYTGFAVRKDIEVSDPADFSITRGNSKLRFASY 139

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
            + + +                   + + R               + +            
Sbjct: 140 IVVNPSQKDELHLLSVHLKAGCSGAYKNSRDCQTLSQQGEALAKWMSEREKKKEQYAVMG 199

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
           D    L  ++ +         DA   T DT            S +      IDHI++SP+
Sbjct: 200 DFNHNLSYQRDWLWAIMTLGNDAQLVTRDTQADCKVRSNKNPSKTHQFRSLIDHIIVSPQ 259

Query: 232 ATSL------LHSARIDTKPRGWTKPSDHTPV--IVSLD 262
             +         S  +        K SDH PV   V+L+
Sbjct: 260 IKAKNAHQTLFSSQDVLDY-----KLSDHCPVNATVTLN 293


>gi|115360332|ref|YP_777469.1| endonuclease/exonuclease/phosphatase [Burkholderia ambifaria AMMD]
 gi|115285660|gb|ABI91135.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria AMMD]
          Length = 269

 Score = 49.8 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/263 (10%), Positives = 62/263 (23%), Gaps = 49/263 (18%)

Query: 4   VTVATWNVNS------IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57
           + +AT+N+         RA  H +A  I E + D+I LQE               L    
Sbjct: 29  LRIATYNIRGGYGKWHTRAA-HRIAQVIHELDADVIALQEV-------------PLG--- 71

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
                              +  +    G                    L    +      
Sbjct: 72  ------------GTHAPDVLAHLRDATGMHAVAGPTIDTPERRYGNAVLSRCPIRAARTL 119

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
            ++  + + + +        A     +   L  +                          
Sbjct: 120 DLSFHQREPRGALDADIDSSAGMIRVVATHLGLSASERSAQVQRLLAAFDTGAMPVILMG 179

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLY-SFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
           ++ + F + + +               + + +  ++             I + P     L
Sbjct: 180 DINEWFVRGRALRALVTRFRRAPAPRTFPTLYPVFSLDR----------IWIHPG--EWL 227

Query: 237 HSARIDTKPRGWTKPSDHTPVIV 259
               +    R   + SDH P++ 
Sbjct: 228 VDVNVHRSMRAR-RASDHYPLVA 249


>gi|327539872|gb|EGF26475.1| endonuclease/exonuclease/phosphatase family protein [Rhodopirellula
           baltica WH47]
          Length = 286

 Score = 49.8 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 37/266 (13%), Positives = 74/266 (27%), Gaps = 43/266 (16%)

Query: 5   TVATWNV-----NSIRARIHNLAAWIKENNPDIICLQET--KTEDKNFPFETLQSLNYHI 57
            V ++N+     N  +  +   A  I +  PD + LQE   +        +  Q L  H+
Sbjct: 54  RVLSYNIKRGYGNDGKTDLPRTAEVISKLKPDFVGLQEVDERCNRSG-KVDQAQWLGEHL 112

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
           +     +        +Y    +  +       V+              + + +       
Sbjct: 113 DMHAAFAPFMDYDGGRYGMAILSRYPIEKTESVELARGREPRVALAAHVTLPDGNKLTLV 172

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
            +      D     ++  +       L  P I  GD+N  P+                  
Sbjct: 173 NVHFDYIRDDTVRFEQATKVREFIQSLSNPAILLGDFNDTPE------------------ 214

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
                  +   +     + A       ++F               ID +  SPE    + 
Sbjct: 215 ------SRTVQLFQDGFVEADKPADDSFTF-SAEKPDRE------IDFLFASPETQWTVK 261

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +  +  +P      SDH PV+  L +
Sbjct: 262 TVDVIDEPL----ASDHRPVMAVLQL 283


>gi|71026795|ref|XP_763041.1| hypothetical protein [Theileria parva strain Muguga]
 gi|68349994|gb|EAN30758.1| hypothetical protein TP03_0022 [Theileria parva]
          Length = 479

 Score = 49.8 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 20/144 (13%), Positives = 43/144 (29%), Gaps = 12/144 (8%)

Query: 5   TVATWNVNSI------RARIHNLAAWIKENNPDIICLQETKTEDKNF----PFETLQSLN 54
           T+ TWNV  +      +    +    +K+++PDI+ LQ+ K          P  + ++  
Sbjct: 293 TILTWNVCGLALSKSKKNIWESFIQIVKQHDPDIVVLQDVKLCSSEILGKQPKLSARTYG 352

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGD--DLDVQARFIEATFTINTQTLRIGNLY 112
            H+     +      +++  +      +           A      FTI    L +    
Sbjct: 353 GHVAPSYAQEVQDADLVNDLKRTTFKKYYCVFSLSAWRIAGRKMHHFTIQQLLLNLTVSS 412

Query: 113 LPHGNPITSTKYDDKISWIKRFLR 136
             H +       +           
Sbjct: 413 FKHFSNYLQHISNYLQCNTNAPQD 436


>gi|78776910|ref|YP_393225.1| endonuclease/exonuclease/phosphatase [Sulfurimonas denitrificans
           DSM 1251]
 gi|78497450|gb|ABB43990.1| Endonuclease/exonuclease/phosphatase [Sulfurimonas denitrificans
           DSM 1251]
          Length = 334

 Score = 49.8 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 47/328 (14%), Positives = 86/328 (26%), Gaps = 76/328 (23%)

Query: 2   SVVTVATWNV------------------NS----------IRARIHNLAAWIKENNPDII 33
           +++ +AT+NV                  NS          I+  + N+A  IK+ + DII
Sbjct: 18  TILKIATYNVENLFDLETSGYEYSEYIPNSTSEWNQKNYKIK--LKNIAQVIKDIDADII 75

Query: 34  CLQETKTEDKNFPFETL-----QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDL 88
            L+E ++                   Y+     + +   VA+LSK   +     +     
Sbjct: 76  ALEEVESLQALLDLRFALKQSGLYYGYYSIADKKNTTVKVALLSKVPFVY-SKEISVTQT 134

Query: 89  DVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRL------ 142
                 +E  F IN + L I   +    +   S +     S +KR       +       
Sbjct: 135 YEYRNILETKFNINGKELYIFVNHWKSKSGAESQRVLCAKSLMKRVKEIGFDKNIILLGD 194

Query: 143 ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH 202
              +   +                 I                  Q   F +      D  
Sbjct: 195 FNSDYEEYLKFAKKREHNDTDGITGINHILGTINQRNSALHVNYQKESFYNLW-YDTDED 253

Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKP----------------- 245
             YS+  Y            +D+I++S    +    + I                     
Sbjct: 254 KRYSY-LYRGKKEV------LDNILISQSLLNAKDVSYIHNTISNFNKEYLFKKNNIYRW 306

Query: 246 ---------RGWTKPSDHTPVIVSLDIP 264
                          SDH P++    + 
Sbjct: 307 QISKARVKKHKGQGYSDHLPLVARFRVD 334


>gi|16125115|ref|NP_419679.1| hypothetical protein CC_0862 [Caulobacter crescentus CB15]
 gi|221233842|ref|YP_002516278.1| hypothetical protein CCNA_00905 [Caulobacter crescentus NA1000]
 gi|13422121|gb|AAK22847.1| conserved hypothetical protein [Caulobacter crescentus CB15]
 gi|220963014|gb|ACL94370.1| hypothetical protein CCNA_00905 [Caulobacter crescentus NA1000]
          Length = 305

 Score = 49.8 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 41/290 (14%), Positives = 80/290 (27%), Gaps = 44/290 (15%)

Query: 6   VATWNV---N-----SIRARIHNLAAWIKENNPDIICLQE-TKTEDKNFPFETLQSLNYH 56
           V ++N+   N       R R   +   I+   PDI+ LQE           +     +Y 
Sbjct: 45  VMSYNIRYDNPDDRPDWRTRRGPMVEQIRFFAPDILGLQEALPAMVDQLAGDLAGYAHYG 104

Query: 57  IETCGQKSYNGVAILSK----YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           +             +      +Q +   T+      D  ++  +A        L + +  
Sbjct: 105 VGRDDGARLGETTTIFYRAERFQRVLARTYWCSPTPDTPSKAYDAALPRTFTRLVLKDRI 164

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRL--ELEEPLIFAGDYNIIPQPHDCYNPIIWE 170
                 + +   D   +  +         L    +  LI  GD+N  P+          E
Sbjct: 165 TGVTFDVRNAHLDHVGAESRAKCAAQILALAPWPKARLITLGDFNSAPEEAPYRLLTAPE 224

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230
                         +      +     +  T + ++           + G  ID+I +  
Sbjct: 225 G-----------PYRDARAAASSVFSPSTGTFNRFT---------PASIGPPIDYIFVDR 264

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
                +    + T        SDH PV+  + +          T    KP
Sbjct: 265 RL--NVARFAVPTDVADAGVISDHFPVLAEITL-------SPKTRAKAKP 305


>gi|291515225|emb|CBK64435.1| Metal-dependent hydrolase [Alistipes shahii WAL 8301]
          Length = 292

 Score = 49.8 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 42/277 (15%), Positives = 73/277 (26%), Gaps = 42/277 (15%)

Query: 7   ATWNV----------NSIRARIHNLAAWIKENNPDIICLQE--------TKTEDKNFPFE 48
            ++N+          N   AR       I+  +PD+I  QE         K    N P  
Sbjct: 38  MSFNIRYYKPGADGDNGWVARRAACLEMIRAESPDVIGFQEPHRPQIDYLKV---NLPEY 94

Query: 49  TLQSLNYHIETCGQKSYN--GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
               +     T  +K  +     ++   +   I+       +          +    + +
Sbjct: 95  AEVDMGRDAATDIEKKPDGGEHLMIMYRRSKYILLDSGFFWISPTPECPSRGWDAMCRRV 154

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
            +               +D     I +  R  S R+ +      AG+   +    D    
Sbjct: 155 TVWVQLKDRKTGKEFFYFDTHFDHIGKQARAESARMMVARMKRIAGEKAAVFLSGDLNTT 214

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226
                 A                  TD +   +D     S W              ID I
Sbjct: 215 YDN---ALLDPLKAWMQSARHAAPVTDELPTFNDFGKR-SLW--------------IDFI 256

Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                A +L +   +D+   G    SDH PV     +
Sbjct: 257 FA-RNARALAYRTLVDSGRYGVPFLSDHNPVYALYKL 292


>gi|74007490|ref|XP_848434.1| PREDICTED: similar to LINE-1 reverse transcriptase homolog [Canis
           familiaris]
          Length = 1377

 Score = 49.8 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 40/110 (36%), Gaps = 12/110 (10%)

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
               + E R     L  M FTD  R  H     Y+F+     ++S     RIDHI+    
Sbjct: 260 KQNISKETRALNDTLDQMDFTDIYRTLHPNSTEYTFFSSAHGTFS-----RIDHILGHKS 314

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
             +      I          SDH  + + L+    +K  + S +  ++ I
Sbjct: 315 GLNRYQKIGIVPCI-----FSDHNALKLELN--HNKKFGRTSNTWRLRTI 357


>gi|317125945|ref|YP_004100057.1| endonuclease/exonuclease/phosphatase [Intrasporangium calvum DSM
           43043]
 gi|315590033|gb|ADU49330.1| Endonuclease/exonuclease/phosphatase [Intrasporangium calvum DSM
           43043]
          Length = 255

 Score = 49.8 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 39/272 (14%), Positives = 73/272 (26%), Gaps = 33/272 (12%)

Query: 4   VTVATWNV-NSIRARIH--------NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           + VAT+N+ N    R+          LA  +K  + DI+ LQE    D+N        L 
Sbjct: 1   MRVATFNILNG---RVPADQHVDPTGLADAVKRLDADILALQEV---DQNQHRSGFADLT 54

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFI----EATFTINTQTLRIGN 110
                     ++         P        GD+    A +             Q +R+  
Sbjct: 55  SVAAEAMDAPHHRFVAAIHGSPGATWVASTGDEQPDSAAYGVALLSRYPVKGWQVIRLEP 114

Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170
           +                ++   R    A+    + E  +     + IP+ +      +  
Sbjct: 115 VPFRVPMRFRGRLRPYLVTDEPRVAVLATVDSPVGECTVVGTHLSFIPRWNVHQLRKVVR 174

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230
                   V             +            ++    A S        IDH+++  
Sbjct: 175 ATLDCREPVILMGDLNMGPDQAERTTGLRAAASHATY-PVGAPSEQ------IDHVLVRG 227

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
             T+    A            SDH  +   ++
Sbjct: 228 PLTTSDSGAPALP-------ISDHRALWADVE 252


>gi|223040783|ref|ZP_03611050.1| putative endonuclease/exonuclease/phosphatase [Campylobacter rectus
           RM3267]
 gi|222877973|gb|EEF13087.1| putative endonuclease/exonuclease/phosphatase [Campylobacter rectus
           RM3267]
          Length = 445

 Score = 49.8 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 42/255 (16%), Positives = 79/255 (30%), Gaps = 43/255 (16%)

Query: 16  ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75
           A+   ++A IKE N DII LQE   E++    E ++  +Y            V +    +
Sbjct: 64  AKFKTVSAKIKELNADIIALQEI--ENEQILKELMREASYKYFAFSNSKNGPVGLAVLSR 121

Query: 76  PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135
                T +           +   F +N Q   + NL+ P                     
Sbjct: 122 VKPEKTRIFSVPNVKTRDILRLDFEVNGQKFSLLNLHFP--------------------- 160

Query: 136 RFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAI 195
              +++  L++               +    +   N      E+       +N+      
Sbjct: 161 ---ARKNPLKQRKTAFITLKSALTDTEKVVVLGDFNAPYGDKELLGDLAASKNLANLWVF 217

Query: 196 RATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL--LHSARIDTKPRGWTKPSD 253
                 H  YS     A          +DH++LS +A S   + ++          + SD
Sbjct: 218 L---PKHERYSHTSNNA----------LDHVLLSKDALSQNYVLNSF--KVELDGAQISD 262

Query: 254 HTPVIVSLDIPEPRK 268
           H  ++  L+  +  K
Sbjct: 263 HFALVFRLNFDKNAK 277


>gi|74007516|ref|XP_534504.2| PREDICTED: similar to LINE-1 reverse transcriptase homolog [Canis
           familiaris]
          Length = 1207

 Score = 49.8 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 41/110 (37%), Gaps = 12/110 (10%)

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
           +   + E R     L  M +TD  R  H     Y+F+     ++S     RIDHI+    
Sbjct: 90  NHNISKETRALNDTLDQMDYTDIYRTLHPNSTEYTFFSSAHGTFS-----RIDHILGHKS 144

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
             +      I          SDH  + + L+    +K  + S +  ++ I
Sbjct: 145 GLNRYQKIGIVPCI-----FSDHNALKLELN--HNKKFGRTSNTWRLRTI 187


>gi|241205438|ref|YP_002976534.1| endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240859328|gb|ACS56995.1| Endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 369

 Score = 49.8 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 22/64 (34%)

Query: 223 IDHIMLSPEATSLLHSA-------------------RIDTKPR-GWTKP--SDHTPVIVS 260
           +D++ LSP   +                         ++  PR GW +P  SDH PV+++
Sbjct: 306 LDYLWLSPALAAHNAGCLPEIIRSGQPYRTVFPPGQEVERYPRTGWDRPKASDHCPVVMT 365

Query: 261 LDIP 264
           LD+P
Sbjct: 366 LDLP 369


>gi|281347898|gb|EFB23482.1| hypothetical protein PANDA_006821 [Ailuropoda melanoleuca]
          Length = 126

 Score = 49.8 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 37/106 (34%), Gaps = 12/106 (11%)

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            +E R     L  +   D  R  H     YSF+     ++S     RIDH +      S 
Sbjct: 18  NIETRALNAILDELDLIDIYRTLHPRTKEYSFYSNAHGTFS-----RIDHALGHKTGLSQ 72

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
                I          SDH  + + L+     K  ++S +  ++ I
Sbjct: 73  YQKIEIIPCI-----FSDHNALKLELN--HKEKPGRNSNTWRLRTI 111


>gi|162147973|ref|YP_001602434.1| endonuclease/exonuclease/phosphatase family protein
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|209542591|ref|YP_002274820.1| endonuclease/exonuclease/phosphatase [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|161786550|emb|CAP56132.1| putative endonuclease/exonuclease/phosphatase family
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|209530268|gb|ACI50205.1| Endonuclease/exonuclease/phosphatase [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 290

 Score = 49.8 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 44/287 (15%), Positives = 77/287 (26%), Gaps = 45/287 (15%)

Query: 2   SVVTVATWNVNSIRAR------------------IHNLAAWIKENNPDIICLQETKTEDK 43
             + V+TWN++ + AR                  +  LA +    + DI+  QE   +  
Sbjct: 25  RTIKVSTWNLDWLTARAAGDPTLPPDVHPRADADLRRLAVYAARLDADIVGFQEV--DSP 82

Query: 44  NFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
                      Y I            +         +   P                 + 
Sbjct: 83  ALAARLFPPGRYRIVMTADPVVQRTGLAVATSL--TIERHPDLAALDVYPPTAPHPLRSG 140

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
             + IG+      N      +              +  L L   +    D+    Q    
Sbjct: 141 LDVTIGDG---TANLRVLVVHLKAGCRDAAPSDRRAACLTLARQMAVLDDWVAQRQDEGV 197

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223
              ++ + +   T          Q+   T A           +++              I
Sbjct: 198 PFLVMGDFNRNLTPGDPFFHLLDQDGPLTLATAGRASPCWGGTYF--------------I 243

Query: 224 DHIMLSPEATSLLH--SARIDT----KPRGWTKPSDHTPVIVSLDIP 264
           DH++L  +A   L   S R+ T     P      SDH PV V L++P
Sbjct: 244 DHLLLGNQARGWLRPDSLRVLTYDEQDPARAPALSDHCPVSVRLEMP 290


>gi|254427925|ref|ZP_05041632.1| endonuclease/exonuclease/phosphatase family [Alcanivorax sp. DG881]
 gi|196194094|gb|EDX89053.1| endonuclease/exonuclease/phosphatase family [Alcanivorax sp. DG881]
          Length = 310

 Score = 49.8 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/267 (11%), Positives = 68/267 (25%), Gaps = 40/267 (14%)

Query: 14  IRARIHNLAAWIKE--NNPDIICLQETKTEDKNFPFETLQS------LNYHIETCGQKSY 65
           +RARI+ +A +I E  N P ++ LQE    +     + L          Y          
Sbjct: 65  LRARINAVAGFIVEDLNAPHVLALQEV---ENQAVLDRLADRLSQRGYRYRSALREGNDP 121

Query: 66  NGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYD 125
           +G+ + +      +           Q     A +      + +      +   +      
Sbjct: 122 SGMDV-AIMYRSPVNIGSVSTLFSGQQFHGHALYARPPLVVALEAPLAANVVVVHWRSAR 180

Query: 126 DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQK 185
           +         R     L      +      +    +  ++   + +      +       
Sbjct: 181 NLKKAWVHEKRQTQAALLANWVTMQTSPLIVAGDFNTTWDEGRFSDSHERFEQSGLLNLW 240

Query: 186 LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI---- 241
                              YSF         +     +DHI +SP     +    +    
Sbjct: 241 SF-----------LPEKERYSF---RHRCRPQA----LDHIWVSPGLKPSVSKVAVSRGN 282

Query: 242 ------DTKPRGWTKPSDHTPVIVSLD 262
                     +G    SDH  ++V  +
Sbjct: 283 AGRYDSLYGSQGVAPISDHDALVVYFE 309


>gi|94267118|ref|ZP_01290753.1| Endonuclease/exonuclease/phosphatase [delta proteobacterium MLMS-1]
 gi|94269243|ref|ZP_01291411.1| Endonuclease/exonuclease/phosphatase [delta proteobacterium MLMS-1]
 gi|94272682|ref|ZP_01292167.1| Endonuclease/exonuclease/phosphatase [delta proteobacterium MLMS-1]
 gi|93450049|gb|EAT01420.1| Endonuclease/exonuclease/phosphatase [delta proteobacterium MLMS-1]
 gi|93451292|gb|EAT02176.1| Endonuclease/exonuclease/phosphatase [delta proteobacterium MLMS-1]
 gi|93452167|gb|EAT02834.1| Endonuclease/exonuclease/phosphatase [delta proteobacterium MLMS-1]
          Length = 248

 Score = 49.8 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 43/275 (15%), Positives = 79/275 (28%), Gaps = 45/275 (16%)

Query: 4   VTVATWNVNSIRA-------RIHNLAAWIKENNPDIICLQETKTEDKNFPF----ETLQS 52
           + + ++N++  RA       R   +A  I  + PD++ LQE    D   P     +  + 
Sbjct: 3   LRIMSYNIH--RAIGVDRLFRPERIARIINHHQPDLVLLQEV---DVGVPRSRKLDLAEE 57

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           L    +   +     VA+       +              R      T+     R     
Sbjct: 58  LARLCDYPHRALGLNVALR------QGHYGNATLSRFPIQRQRNIDLTLPDHKARGCLYT 111

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
               +P  S      +  +   L F  +  ++   +       + P           +  
Sbjct: 112 NIVIDPDQSGPVALPVFNLHLGLSFHERPQQVGMVIRSPEFAELDPAAPCIVAGDFNDWF 171

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                   +          +   +         SF  Y   S+S   G  +D I L    
Sbjct: 172 TRLAPMFTEIMGFRCATSHSHGFQN--------SFLTY--PSFSPTGG--LDKIFLRGPL 219

Query: 233 TSLLHSARIDTKPR---GWTK-PSDHTPVIVSLDI 263
                   I  + R   G +K  SDH PV+  L++
Sbjct: 220 -------EIIKRRRCRMGISKLASDHLPVLAELEL 247


>gi|328473167|gb|EGF44015.1| putative phospholipase C [Vibrio parahaemolyticus 10329]
          Length = 442

 Score = 49.8 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 42/283 (14%), Positives = 82/283 (28%), Gaps = 43/283 (15%)

Query: 4   VTVATWNVNSIRA-------RIHNLAAWIKENNPDIICLQETKTE-DKNFPFETLQSLNY 55
           + + T+N+ ++ A       R   +  ++K    D++ LQE        F  E  +   Y
Sbjct: 178 LKLMTYNIWALPAIASHIGERYELIPDYVK--GYDVLALQEVFASGRDAFLRELAKEYPY 235

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
             +   +K +N             + +         +               I      H
Sbjct: 236 QTKMLDKKGFNVYDGGVVIVSRYPIVNEAQYVFPDCSGTDCFADKGVNYAEIIKGGQAYH 295

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
                +  +D   +   R  +F   R         A   NI       Y+     N    
Sbjct: 296 VFATHTASFDTDTAREYRQRQFQQMR-------TMAQSLNIPNNETVVYSGDFNVNK--- 345

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYS--FWDYYADSWS-------KNKGIRIDHI 226
                              + A    +  Y+   +D   ++++       +N    +D++
Sbjct: 346 ------LKFPGDYQQMIANLSAMEPQYSGYTASTFDPRINNFAGEALSGGENVEY-LDYV 398

Query: 227 MLSPEA-TSLLHSARID---TKPRGWTKP---SDHTPVIVSLD 262
           M+S E      +  R+D   +   G  K    SDH PV   + 
Sbjct: 399 MVSNEYGVKSFNDNRVDVPRSTAEGLWKHYNLSDHFPVSAVIK 441


>gi|328958120|ref|YP_004375506.1| endonuclease/exonuclease/phosphatase [Carnobacterium sp. 17-4]
 gi|328674444|gb|AEB30490.1| endonuclease/exonuclease/phosphatase [Carnobacterium sp. 17-4]
          Length = 278

 Score = 49.8 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/271 (11%), Positives = 65/271 (23%), Gaps = 15/271 (5%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           + + T N +S        ++  L   I  +  D+I  QE          +      Y   
Sbjct: 1   MKLLTLNTHSWLEEQPYDKLDTLVKTILSHQFDVIAFQEINQPIDEAVLDLSDQFAYQAA 60

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
               +           Q +E                 +                +     
Sbjct: 61  DPTVQIKRNNFAFLVQQKLEQAGLRYTWTWQPAHVGYDIYDEGLAFLSLHPIKEIKTFYA 120

Query: 119 ITSTKYDDKISW-------IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC-YNPIIWE 170
             S  +D+  +           +          ++   F   + +          PI   
Sbjct: 121 SKSRAFDNYKTRPVLGVLIEDSWYFNLHLGWWDDKDDSFKEQWAVCSTVFKMLAEPIYLM 180

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230
            D     ++      L    + D           Y+           N+ +RID I  + 
Sbjct: 181 GDFNNPAQMTNEGYDLVTRDWFDTFHLAEKRDKGYTVEKNIDGWAENNEKLRIDFIFTNH 240

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
                + S+++    +     SDH  V + L
Sbjct: 241 PFE--VDSSKVFFNGKNNQIISDHYGVSIKL 269


>gi|324511832|gb|ADY44920.1| Neutral sphingomyelinase [Ascaris suum]
          Length = 392

 Score = 49.8 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 39/281 (13%), Positives = 74/281 (26%), Gaps = 39/281 (13%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTED--KNFPFETLQSLNYHIETCGQKSYNGVAILSKY 74
           R+  L   +   N DII LQE  +                Y        + +GV I S++
Sbjct: 29  RLSKLCEALLSTNYDIISLQEIWSVRDFDRINSAIKDVYPYSYYFHSGFTGSGVCIFSRH 88

Query: 75  QPIEIVTHLPGDDLDVQARFIEATFTINTQTLR-----------IGNLYLPHGNPITSTK 123
             +  + H    +           F      +                     +      
Sbjct: 89  AIVSTLMHRYSLNGFAHHIHRGDWFGGKVVGMVQLEIGTYRINFYATHLHAEYDRENDLY 148

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
              ++S      +F        +  I  GD+N+ P        +   N       +  ++
Sbjct: 149 LPHRLSQAFELSQFVKHTSHAADLTILTGDFNLEPDDLGYRLIVDNAN-------LIDAW 201

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID- 242
               N    +         + Y+             G R+D+IM           + +D 
Sbjct: 202 LARPNKSGCETGMTCDRPDNCYT---ARNLKQPNPAGKRLDYIM------YKCGKSDVDL 252

Query: 243 --TKPRGWTKP-------SDHTPVIVSLDIPEPRKKQQDST 274
              + R    P       SDH  V     + +  +K++   
Sbjct: 253 VMCENRLGRIPGDKQINYSDHLGVYADFVVSKQHEKEKQEH 293


>gi|182419446|ref|ZP_02950698.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           butyricum 5521]
 gi|237666690|ref|ZP_04526675.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           butyricum E4 str. BoNT E BL5262]
 gi|182376777|gb|EDT74349.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           butyricum 5521]
 gi|237657889|gb|EEP55444.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           butyricum E4 str. BoNT E BL5262]
          Length = 265

 Score = 49.8 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 44/280 (15%), Positives = 77/280 (27%), Gaps = 37/280 (13%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET------KTEDKNFPFETLQS 52
           + + T N +S +      +I  LA  I E N D+I LQE       K  D     +    
Sbjct: 1   MKLLTLNCHSWQEENQLDKIKYLAKVISEKNYDVIALQEVSQSIDCKIIDGILKEDNF-- 58

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
                     K        S Y+     +H+  D  +     +     IN+++  I    
Sbjct: 59  ------IVLLKEELNKFTKSNYEFYWDFSHIGYDIYEEGLAIMTRHKFINSESFFITKSM 112

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP--HDCYNPIIWE 170
                              K    ++      ++                +     I   
Sbjct: 113 DRTYWKTRKIIKSSIEINNKEVDFYSCHLGWWKDDEEPFTYQADKLLDTVNSKKTAIFMG 172

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYS--------FWDYYADSWSKNKGIR 222
           +         + +  L N    D    T  +    S         WD         + +R
Sbjct: 173 DFNNNAFVRNEGYDYLINKNLNDLYLKTDKSDEECSATVKGKIDGWD------ENKEKLR 226

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
           +D I+ S      + +AR+          SDH  V + +D
Sbjct: 227 LDLIL-SNNLL-KVKNARVIFNGINKEIISDHYGVELEID 264


>gi|73996185|ref|XP_848835.1| PREDICTED: similar to LINE-1 reverse transcriptase homolog [Canis
           familiaris]
          Length = 1366

 Score = 49.8 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 39/110 (35%), Gaps = 12/110 (10%)

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
               + E R     L  M F D  R  H     Y+F+     ++S     RIDHI+    
Sbjct: 249 KQNISKETRALNDTLDQMDFIDIYRTLHPNSTEYTFFSSAHGTFS-----RIDHILGHKS 303

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
             +      I          SDH  + + L+    +K  + S +  ++ I
Sbjct: 304 GLNRYQKIGIVPCI-----FSDHNALKLELN--HNKKFGRTSNTWRLRTI 346


>gi|170074079|ref|XP_001870509.1| sphingomyelin phosphodiesterase 2 [Culex quinquefasciatus]
 gi|167870837|gb|EDS34220.1| sphingomyelin phosphodiesterase 2 [Culex quinquefasciatus]
          Length = 423

 Score = 49.8 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 47/287 (16%), Positives = 81/287 (28%), Gaps = 38/287 (13%)

Query: 1   MSV-VTVATWNVNSI------RA-RIHNLAAWIKENNPDIICLQETKTEDK--NFPFETL 50
           M++ +++ T N+  I      RA R+  +   +   N DI+ LQE  +E           
Sbjct: 1   MALELSILTLNIWGIPYVSKDRAVRVEAIGEVLASGNYDIVSLQEVWSESDYRYLKERAA 60

Query: 51  QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL---- 106
            +L +          +G+A+LSKY  +    H    +  V        F           
Sbjct: 61  AALPFAHYFYSGVVGSGLAVLSKYPIVSAFFHAWSVNGYVHRIQHGDWFGGKGVGFVKIS 120

Query: 107 -------RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159
                            +         ++       +F           + AGD N  P 
Sbjct: 121 VNEQLVHVYAAHLHAEYDRSCDDYMAHRVIQAYDTAQFIENTQGNGVLQVLAGDLNTEPG 180

Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK 219
                        +  T    +      ++   +  R ++              +    K
Sbjct: 181 DLAYRVLQTC---SRLTDSADKKMYASGDLNTNEIARNSYTDPEA---------AKKSPK 228

Query: 220 GIRIDHIM--LSPEATSLLHSARI---DTKPRGWTKPSDHTPVIVSL 261
           G RID+IM          L   R+   D  P      SDH  V   +
Sbjct: 229 GKRIDYIMYRFGSHYEGKLLEHRLPLPDRIPGKDISYSDHEAVYAKI 275


>gi|269967746|ref|ZP_06181794.1| hypothetical protein VMC_32240 [Vibrio alginolyticus 40B]
 gi|269827652|gb|EEZ81938.1| hypothetical protein VMC_32240 [Vibrio alginolyticus 40B]
          Length = 287

 Score = 49.8 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/276 (10%), Positives = 80/276 (28%), Gaps = 26/276 (9%)

Query: 2   SVVTVATWNV-----NSIR-ARIHN----LAAWIKENNPDIICLQETKTEDKNFPFETLQ 51
           + + + +WN+     +  + +R       L  ++ +   DI+  QE             +
Sbjct: 20  NSINLTSWNIEWLSIDGGKVSRTPQDFEKLTHYVDKTQADILAFQEV-----ESVAAMQK 74

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
           ++            N      ++      T     +        + + T     LR  + 
Sbjct: 75  AVGNDFTIYLSDRSNASNRHLQFNDTNQYTGFAVRNGVSVLDTPDFSITRGNSKLRFASY 134

Query: 112 YLPHGNPITSTKY--DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
            + + N    T        +      R       +++       +    + +  +  ++ 
Sbjct: 135 LVLNPNQENETHLLSVHLKAGCSGAYRNNRDCKIVKQQGQALAKWIKAREDNKQHYVVLG 194

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
           + +     +    +  + +      +                  + +      IDHI++S
Sbjct: 195 DFNHNLGYQGDWLWDVISDNTSAKLVTKDTKAECKVR--SNRNPNKTHQFRSVIDHIIVS 252

Query: 230 PEATSLLHSARIDTKPRGWT----KPSDHTPVIVSL 261
            +  +   S+ + T  +       K SDH PV  +L
Sbjct: 253 GDLKA---SSGVQTVFKTQDVLDYKLSDHCPVSTTL 285


>gi|307822071|ref|ZP_07652303.1| Endonuclease/exonuclease/phosphatase [Methylobacter tundripaludum
           SV96]
 gi|307736637|gb|EFO07482.1| Endonuclease/exonuclease/phosphatase [Methylobacter tundripaludum
           SV96]
          Length = 502

 Score = 49.8 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/253 (12%), Positives = 78/253 (30%), Gaps = 23/253 (9%)

Query: 20  NLAAWIKENNPDIICLQET----------KTEDKNFPFETLQSLNYHIETCGQKSYNGVA 69
            +A  I + N D++CLQE              +         +  YHI T          
Sbjct: 260 QIAKAINDLNVDVVCLQEVAELWNDGAGDWASNSAKIINDRLATPYHIHTDWSHLGFD-- 317

Query: 70  ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKIS 129
              +     +  +                 +I+++ + +  + +P+   +          
Sbjct: 318 -KYREGVAILSKYPLLKQDAKYVSDSHDVHSIHSRKVVMAQIKVPYMGRVNVFSAHLSWW 376

Query: 130 WIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNM 189
                 +F       E       +  ++    +        +      +    +    + 
Sbjct: 377 EDGFAGQFQRLCEWAEAKQSAHVNTTLLCGDFNIAAGSTGYHLVVDGHQYDDQYLAANSQ 436

Query: 190 GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT 249
           G  + I   +D +    + +Y +D +      RID+I L+  +   + SA++    + + 
Sbjct: 437 GVFEKIFRVNDPY----WQNYLSDDY------RIDYIFLNKTSELQVFSAKVLFTEQDYG 486

Query: 250 KPSDHTPVIVSLD 262
           + SDH    ++ +
Sbjct: 487 RVSDHCGYFMTFE 499


>gi|29828020|ref|NP_822654.1| hypothetical protein SAV_1479 [Streptomyces avermitilis MA-4680]
 gi|29605122|dbj|BAC69189.1| hypothetical protein [Streptomyces avermitilis MA-4680]
          Length = 303

 Score = 49.8 bits (117), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 43/268 (16%), Positives = 77/268 (28%), Gaps = 24/268 (8%)

Query: 6   VATWNV--------NSIRARIHNLAAWIKENNPDIICLQE-TKTEDKNFPFETLQSLNYH 56
           V T+N+        +S   R   +   ++   P +I  QE    + ++   +     ++ 
Sbjct: 49  VMTFNLRFASASEPHSWAVRRPVMRELLRRERPHVIGTQEGLYQQVRDIEADLGPHYDW- 107

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
           I T          +   Y    +               +  + T    ++R+        
Sbjct: 108 IGTGRAGGSRDEFMAVFYDTRRLAPLEYDHFWLSDTPDVIGSNTWGGGSIRMVTRVRFRD 167

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
                  +    + +    ++A  R         AG     P             +A + 
Sbjct: 168 LADGDRPFHFLNTHLDNASQYARARAAALIADRIAGLDRSQPLVVTGDFNAAAHKNAVYE 227

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLY-SFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
                    +   G  D      +   LY +F  Y         G RID I+ SP   + 
Sbjct: 228 --------TMLGAGLVDTWDTAAERGKLYGTFHGYKPLVPD---GDRIDWILASPGVAAH 276

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              A I+        PSDH PV  SL +
Sbjct: 277 C--ASINAFSSNGQFPSDHLPVQASLRL 302


>gi|330811892|ref|YP_004356354.1| Conserved hypothetical protein; putative exported protein
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
 gi|327380000|gb|AEA71350.1| Conserved hypothetical protein; putative exported protein
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 359

 Score = 49.8 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 46/314 (14%), Positives = 80/314 (25%), Gaps = 57/314 (18%)

Query: 4   VTVATWNV---NSIRAR---------------------IHNLAAWIKENNPDIICLQET- 38
           + V TWNV      R                       +  +A  I++  PD++ LQE  
Sbjct: 53  LKVMTWNVQFLAGKRYVFWHDLAQGNDESPTLEDMAFSLDEVARVIRDEQPDVVLLQELD 112

Query: 39  ---KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFI 95
              K  D     + LQ     +  CG  +++  A       I          L       
Sbjct: 113 KGAKASDYQDQLKLLQERLADLYPCGTSAFDWKADFVPDPHIFGSVGRQLATLSRYRIDH 172

Query: 96  EATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL----------- 144
                +      I +      N +  +            L    +R              
Sbjct: 173 AERVQLPVADTNIISRQFQPKNALLVSYLPLSGGGQLAVLNTHLERATEPDETLPRQITA 232

Query: 145 -----------EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTD 193
                        P +  GD+N++P       P            +   + K   +   +
Sbjct: 233 VAKALDKFESAGTPWLIGGDFNLLPLGQYRRLPTEQRTPYSADSPLHLLWDKYPMIPTNN 292

Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253
                 D  H  + +              +D++  SP        A++        + SD
Sbjct: 293 EAS-GIDREHWLTHYPNDPG--LNGPDRTVDYLFYSPRLKR--VEAQVRQD--DTLRISD 345

Query: 254 HTPVIVSLDIPEPR 267
           H PVI    +P   
Sbjct: 346 HLPVIARFLLPAAP 359


>gi|283457615|ref|YP_003362199.1| metal-dependent hydrolase [Rothia mucilaginosa DY-18]
 gi|283133614|dbj|BAI64379.1| metal-dependent hydrolase [Rothia mucilaginosa DY-18]
          Length = 292

 Score = 49.8 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 44/298 (14%), Positives = 79/298 (26%), Gaps = 45/298 (15%)

Query: 4   VTVATWNVNS------IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETL--QSLNY 55
           +   T N +S      I A+I  LA +I E   D+I LQE            +  + LNY
Sbjct: 1   MRFLTLNTHSWCEIHQI-AKIRTLAKFIIEQQVDVIALQEV----NQLTSTPVVKEPLNY 55

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
                     +  A+L          +  G   +         +    + + I +     
Sbjct: 56  RGGAGVPVREDNYALLLVQAL-----NEMGATYEWTLTETHIGWDRYDECVAILSRMPIR 110

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
           G        D     ++R    A+  +E      +    ++     D       E     
Sbjct: 111 GIRPIDMSPDYTYFQVQRRAAQAAL-IETPSGPFWCATTHMSWWDFDGEPLFAQEFTRLS 169

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFW------DYYADSWSKN---------KG 220
                 +      +G      A       Y+F       D    +              G
Sbjct: 170 QALAECAETAPVLLGGDFNSAAHLPDEG-YAFVTSTGLIDTRTIAKHTKGENTVHREIAG 228

Query: 221 I-------RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271
                   RID +  +     +     +          SDH+ +++ +D P     Q 
Sbjct: 229 WEGSSDAKRIDFVF-TDRLVDVASHTVVFRDN-SPEAISDHSGLLLEID-PASWAPQS 283


>gi|189242290|ref|XP_966849.2| PREDICTED: similar to endonuclease and reverse transcriptase-like
          protein [Tribolium castaneum]
          Length = 859

 Score = 49.8 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 17/34 (50%)

Query: 9  WNVNSIRARIHNLAAWIKENNPDIICLQETKTED 42
          WN N +RA    L  ++     DI+ + ETK + 
Sbjct: 16 WNANGLRAARDELEEFVDRLQLDIVLVCETKLQP 49


>gi|73946349|ref|XP_855521.1| PREDICTED: similar to LINE-1 reverse transcriptase homolog [Canis
           familiaris]
          Length = 1339

 Score = 49.8 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 40/110 (36%), Gaps = 12/110 (10%)

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
               + E R     L  M FTD  R  H     Y+F+     ++S     RIDHI+    
Sbjct: 222 KQNISKETRALNDTLDQMDFTDIYRTLHPNSTEYTFFSSAHGTFS-----RIDHILGHKS 276

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
             +      I          SDH  + + L+    +K  + S +  ++ I
Sbjct: 277 GLNRYQKIGIVPCI-----FSDHNALKLELN--HNKKFGRTSNTWRLRTI 319


>gi|281346193|gb|EFB21777.1| hypothetical protein PANDA_022020 [Ailuropoda melanoleuca]
          Length = 128

 Score = 49.8 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 36/104 (34%), Gaps = 12/104 (11%)

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
           E +     L  +   D  R  H     YSF+     ++S     RIDH +      S   
Sbjct: 22  ETKALNAILDELDLIDIYRTLHPRTKEYSFYSNAHGTFS-----RIDHALGHKTGLSQYQ 76

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
              I          SDH  + + L+     K  ++S +  ++ I
Sbjct: 77  KIEIIPCI-----FSDHNALKLELN--HKEKPGRNSNTWRLRTI 113


>gi|74002870|ref|XP_850679.1| PREDICTED: similar to LINE-1 reverse transcriptase homolog [Canis
           familiaris]
          Length = 1363

 Score = 49.8 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 40/110 (36%), Gaps = 12/110 (10%)

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
               + E R     L  M FTD  R  H     Y+F+     ++S     RIDHI+    
Sbjct: 246 KQNISKETRALNDTLDQMDFTDIYRTLHPNSTEYTFFSSAHGTFS-----RIDHILGHKS 300

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
             +      I          SDH  + + L+    +K  + S +  ++ I
Sbjct: 301 GLNRYQKIGIVPCI-----FSDHNALKLELN--HNKKFGRTSNTWRLRTI 343


>gi|289619041|emb|CBI54309.1| unnamed protein product [Sordaria macrospora]
          Length = 459

 Score = 49.8 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/97 (20%), Positives = 40/97 (41%), Gaps = 9/97 (9%)

Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK--NKGIRIDHI 226
            +    +    +Q  +K + +   D  RA +     Y+F+   ++ W    N   R+D +
Sbjct: 366 NKRAGAWLGPGKQDMEKEKCLDAVDVFRAIYGMEKRYTFYS-QSNVWGTSCN---RVDMV 421

Query: 227 MLSPEATS--LLHSARIDTKPRGWTKPSDHTPVIVSL 261
           ++S +      +    I   P+    PSDH P+ V +
Sbjct: 422 IVSKQLWEDGRVIDTGILNTPQ-ERGPSDHVPIWVEI 457


>gi|169834285|ref|YP_001694221.1| metal-dependent hydrolase [Streptococcus pneumoniae Hungary19A-6]
 gi|168996787|gb|ACA37399.1| metal-dependent hydrolase [Streptococcus pneumoniae Hungary19A-6]
          Length = 271

 Score = 49.8 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/264 (11%), Positives = 72/264 (27%), Gaps = 14/264 (5%)

Query: 4   VTVATWNVNSI--RARIHNL---AAWIKENNPDIICLQETK-------TEDKNFPFETLQ 51
           +   T N +S+  +            I E + D+IC QE          E  +       
Sbjct: 1   MKFLTLNTHSLMEKEAEEKFQILLEDILEKDYDLICFQEINQEMTSSEVEVNDLYQALPA 60

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
           +   H +   +     ++   K        +  G D   +   I +   I  + + + ++
Sbjct: 61  AEPIHQDHYVRLLVEKLSEQGKNYYWTWAYNHIGYDRYHEGVAILSKTPIEAREILVSDV 120

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
             P           + +   K     +      ++                    ++  +
Sbjct: 121 DDPTDYHTRRVALAETVVDGKELAVASVHLSWWDKGFQEEWARFEAVLKKLNKPLLLAGD 180

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
                 +          +G  DA   T +    Y+            + +RID++  + E
Sbjct: 181 FNNPAGQEGYQAILASPLGLQDAFEVTQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTTKE 240

Query: 232 ATSLLHSARIDTKPRGWTKPSDHT 255
               + +  +        + SDH 
Sbjct: 241 LA--VENLHVVFDGNKSPQVSDHY 262


>gi|223634725|sp|Q5XJA0|TYDP2_DANRE RecName: Full=Tyrosyl-DNA phosphodiesterase 2; Short=Tyr-DNA
           phosphodiesterase 2; AltName: Full=5'-tyrosyl-DNA
           phosphodiesterase; Short=5'-Tyr-DNA phosphodiesterase;
           AltName: Full=TRAF and TNF receptor-associated protein
           homolog
 gi|133777713|gb|AAI15077.1| Ttrap protein [Danio rerio]
          Length = 369

 Score = 49.8 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 9/44 (20%)

Query: 2   SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQET 38
           S +++ +WNV+ +       RAR   L +++    PD++ LQE 
Sbjct: 121 SKLSIISWNVDGLDTLNLADRAR--GLCSYLALYTPDVVFLQEL 162


>gi|119226210|ref|NP_001073171.1| tyrosyl-DNA phosphodiesterase 2 [Danio rerio]
 gi|102230105|gb|ABF70183.1| Ttrap [Danio rerio]
          Length = 369

 Score = 49.8 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 9/44 (20%)

Query: 2   SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQET 38
           S +++ +WNV+ +       RAR   L +++    PD++ LQE 
Sbjct: 121 SKLSIISWNVDGLDTLNLADRAR--GLCSYLALYTPDVVFLQEL 162


>gi|94733763|emb|CAK05424.1| traf and tnf receptor associated protein, like [Danio rerio]
          Length = 383

 Score = 49.8 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 9/44 (20%)

Query: 2   SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQET 38
           S +++ +WNV+ +       RAR   L +++    PD++ LQE 
Sbjct: 135 SKLSIISWNVDGLDTLNLADRAR--GLCSYLALYTPDVVFLQEL 176


>gi|94732377|emb|CAK05007.1| novel protein similar to vertebrate TRAF and TNF receptor
           associated protein (TTRAP) [Danio rerio]
          Length = 387

 Score = 49.8 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 9/44 (20%)

Query: 2   SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQET 38
           S +++ +WNV+ +       RAR   L +++    PD++ LQE 
Sbjct: 139 SKLSIISWNVDGLDTLNLAERAR--GLCSYLALYTPDVVFLQEL 180


>gi|53734141|gb|AAH83404.1| Ttrap protein [Danio rerio]
          Length = 379

 Score = 49.8 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 9/44 (20%)

Query: 2   SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQET 38
           S +++ +WNV+ +       RAR   L +++    PD++ LQE 
Sbjct: 131 SKLSIISWNVDGLDTLNLADRAR--GLCSYLALYTPDVVFLQEL 172


>gi|73971897|ref|XP_855057.1| PREDICTED: similar to LINE-1 reverse transcriptase homolog [Canis
           familiaris]
          Length = 1344

 Score = 49.8 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 40/110 (36%), Gaps = 12/110 (10%)

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
               + E R     L  M FTD  R  H     Y+F+     ++S     RIDHI+    
Sbjct: 228 KQNISKETRALNDTLDQMDFTDIYRTLHPNSTEYTFFSSAHGTFS-----RIDHILGHKS 282

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
             +      I          SDH  + + L+    +K  + S +  ++ I
Sbjct: 283 GLNRYQKIGIVPCI-----FSDHNALKLELN--HNKKFGRTSNTWRLRTI 325


>gi|325109290|ref|YP_004270358.1| endonuclease/exonuclease/phosphatase [Planctomyces brasiliensis DSM
           5305]
 gi|324969558|gb|ADY60336.1| Endonuclease/exonuclease/phosphatase [Planctomyces brasiliensis DSM
           5305]
          Length = 247

 Score = 49.8 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 35/277 (12%), Positives = 66/277 (23%), Gaps = 58/277 (20%)

Query: 4   VTVATWNVN---SIRARIHNLAAWIKE---NNPDIICLQET-----KTEDKNFPFETLQS 52
           + + ++N+      R R +N    I      NPDII LQE      +T   N P E L  
Sbjct: 1   MRLLSYNIQKGYGGRDRRYNFERTIAAIEHENPDIIVLQEVDHNERRTRFDNQP-EILSD 59

Query: 53  L------NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
                  +Y       K   G  ++S++    +           +              L
Sbjct: 60  YFRYEATDYQFNHRVSKGGYGNLLISRFPFHSVTQVCLKLKHRKKRGAQVVVVDSPEGKL 119

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
            +   +L         + +  +  +          L + +   +       P        
Sbjct: 120 LLVGWHLGLKEKQRHAQVNHLLDHVDLQDNLDLPTLIVGDFNDWRNTLADGPFAKHG--- 176

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226
                         ++F     +G  D                                 
Sbjct: 177 ---FEQLTRPPSRYRTFPAYLPIGSLDKAFCRGPI------------------------- 208

Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                    +   R+          SDH P++V   +
Sbjct: 209 --------NVRDVRVVRNQLTKE-ASDHLPLLVDFHL 236


>gi|94967527|ref|YP_589575.1| endonuclease/exonuclease/phosphatase [Candidatus Koribacter
           versatilis Ellin345]
 gi|94549577|gb|ABF39501.1| Endonuclease/exonuclease/phosphatase [Candidatus Koribacter
           versatilis Ellin345]
          Length = 246

 Score = 49.8 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 39/278 (14%), Positives = 74/278 (26%), Gaps = 48/278 (17%)

Query: 4   VTVATWNVN---SI--RARIHNLAAWIKENNPDIICLQETKTEDKNFPFET--------L 50
           + +AT+NV+    +  R     +A  I+E + D+I +QE        P           L
Sbjct: 3   LRIATYNVHKCRGLDRRTDPERIATVIRELDADVIAMQEILDVRDGHPGHDQARRIATNL 62

Query: 51  QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
           Q   +               ++  +     +         + R       +   +L   +
Sbjct: 63  QEYEWRFGENRSLHGGAYGNMTLSRLPITASENYDITWRHRERRGCLRTDV---SLTDRS 119

Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170
           +       + ++  + +    K       +R E   P I  GD+N               
Sbjct: 120 VLHLFNLHLGTSFVERRHQARKLLTEAVLRRAEFTGPRIVLGDFN----EWTRGLASRLM 175

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230
                 +E R   +  +       +                           +DH     
Sbjct: 176 GTEFEAIEPRTHLRYARTYPGVMPLLH-------------------------LDHFYFDR 210

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268
                L S  I    R     SDH P++    + E  K
Sbjct: 211 TL--SLESYCIHRS-RTALIASDHLPLVSEFSLAERTK 245


>gi|242053339|ref|XP_002455815.1| hypothetical protein SORBIDRAFT_03g025683 [Sorghum bicolor]
 gi|241927790|gb|EES00935.1| hypothetical protein SORBIDRAFT_03g025683 [Sorghum bicolor]
          Length = 377

 Score = 49.8 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 39/259 (15%), Positives = 79/259 (30%), Gaps = 32/259 (12%)

Query: 6   VATWNVNSI--RARIHNLAAWIKENNPDIICLQETKTED-KNFPFETLQSLNYHIETCGQ 62
           + TWNV  +  RAR   + +++ +    + CL ETK +         L    +       
Sbjct: 116 IFTWNVRGLNSRARRDVVRSFLLQERVFVACLVETKVDVMDRVMLLDLMGAGFDYFVLPA 175

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
              +G  I++                 +   +  A  +I   TL I    +   +   S 
Sbjct: 176 VGASGGIIVA----------------WLCGDWSVARHSIRNFTLTINIHAVDGSSQPWSL 219

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                         F ++  E+        D+         +N I    D         +
Sbjct: 220 CAVYGPVDDNLKPDFLAEIREVG------ADFPSPLLFSGDFNMIYRAQDKNNNRLNLAA 273

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
            ++ +      A+   +    LY++    ++   +    R+D    +     L    R  
Sbjct: 274 MRRFRRALDAMALDELYLHGRLYTW----SNERVRLTLERLDRAFATLPWLELFPDHR-L 328

Query: 243 TKPRGWTKPSDHTPVIVSL 261
                    SDH+P+++ L
Sbjct: 329 RALSSEC--SDHSPLLLQL 345


>gi|296112314|ref|YP_003626252.1| endonuclease/exonuclease/phosphatase [Moraxella catarrhalis RH4]
 gi|295920008|gb|ADG60359.1| endonuclease/exonuclease/phosphatase [Moraxella catarrhalis RH4]
 gi|326561824|gb|EGE12159.1| endonuclease/exonuclease/phosphatase [Moraxella catarrhalis 7169]
 gi|326563256|gb|EGE13523.1| endonuclease/exonuclease/phosphatase [Moraxella catarrhalis
           46P47B1]
 gi|326563370|gb|EGE13635.1| endonuclease/exonuclease/phosphatase [Moraxella catarrhalis
           12P80B1]
 gi|326576470|gb|EGE26378.1| endonuclease/exonuclease/phosphatase [Moraxella catarrhalis CO72]
          Length = 249

 Score = 49.8 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 36/270 (13%), Positives = 70/270 (25%), Gaps = 39/270 (14%)

Query: 1   MSVVTVATWNV-------NSIRARIHNLAAWIKENNPDIICLQETKTEDKN--FPFETLQ 51
           M  +T+ ++N+       N +  R+  +   + + NPDI+CLQE + ++      F    
Sbjct: 1   MKSITITSYNIHKGMSPTNRL-VRLMGMKDALLKTNPDILCLQEVQGQNLKRTIDFAEFP 59

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
               H                         +   +        +          L I   
Sbjct: 60  DGGQHEWFGEFLGIAS----------SYGKNAEYEHGHHGNAVLSRHPLDPKHNLNITVN 109

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
            L     +    + D        L      L  +    +    + I       +      
Sbjct: 110 RLEKRGVLHCEVHPDGWRRPVVVLCCHLNLLHRDRIKQYQAIRDYIVTLPADASL----- 164

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY--SFWDYYADSWSKNKGIRIDHIMLS 229
                     S +  Q +            H  Y  +F             + +D I + 
Sbjct: 165 -ILAGDFNDWSKKSCQALSSLGLSEVFLQVHGEYPATFPAKMPV-------LSLDRIYV- 215

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
                 +H+A +      W+  SDH P+  
Sbjct: 216 RRL--KVHNAMVHGGV-PWSNLSDHLPISA 242


>gi|264677073|ref|YP_003276979.1| endonuclease/exonuclease/phosphatase [Comamonas testosteroni CNB-2]
 gi|262207585|gb|ACY31683.1| Endonuclease/exonuclease/phosphatase [Comamonas testosteroni CNB-2]
          Length = 307

 Score = 49.8 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 42/303 (13%), Positives = 92/303 (30%), Gaps = 58/303 (19%)

Query: 4   VTVATWNV------NSIRARIHNLAAWIK----ENNPDIICLQETKTEDKNF---PFETL 50
           + + TWNV      + + +    +   ++        D++C+QE      +    P + L
Sbjct: 17  MNILTWNVQWCCGMDGLVSVERIVRHALQMGEQSGGLDVLCMQEIAVNYPDLQGRPGDQL 76

Query: 51  QSL-----NYHIET--------CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA 97
             L      + I                 G  I ++   + +  +L     +   R ++ 
Sbjct: 77  AELKALLPGWQIFFGASVDEFTPRGHQRFGNLIATRLPVLLVQHYLLPMPAEADMRCMQR 136

Query: 98  TFTINTQ------TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFAS------------ 139
             ++ T        +RI   +L + +          +  ++      +            
Sbjct: 137 MCSVVTVDDAALGPVRIMTTHLEYFSARQRMAQAGALRALQMQACALADAPPQPASDGSP 196

Query: 140 -QRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT 198
            Q        +  GD+N  P   +                V      LQ   + ++    
Sbjct: 197 YQTKPHTRHAVLCGDFNFEPHEPEYA--------VLSAPWVAGEEGCLQAGQWRNSWDVL 248

Query: 199 HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVI 258
           +        +     +W    G   D I +S      +H+  +D+     T+ SDH PV+
Sbjct: 249 YPGQPQPPTFRLVDRTWGAEPGA-CDLIWVSDSLCQRVHTWSVDSA----TQASDHQPVM 303

Query: 259 VSL 261
           ++L
Sbjct: 304 LTL 306


>gi|229159517|ref|ZP_04287533.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus R309803]
 gi|228623974|gb|EEK80784.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus R309803]
          Length = 247

 Score = 49.8 bits (117), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/252 (12%), Positives = 53/252 (21%), Gaps = 14/252 (5%)

Query: 18  IHNLAAWIKENNPDIICLQET------KTEDKNFPFETLQSLNYHIETCGQKSYNGVAIL 71
           I  LA  I+E   D+I LQE       K    N   +    L              +   
Sbjct: 4   IKYLAKVIQEEEYDVIALQEVSQSIGAKNVCGNKKEDNFGLLLLEELKALHVKDYNITWD 63

Query: 72  SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWI 131
             +   ++                +  F    +              I     +      
Sbjct: 64  FSHIGYDVYEEGLAIITKHSIIKEDTFFVSENKDTAYWKTRKIVSATIAYNGKNITFYSC 123

Query: 132 KRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191
                   +     +        +         +            E             
Sbjct: 124 HLGWWNDEEESFKGQIDRLMERVDSNALAFLMGDFNNNARLEGEGYEYTMQKGLYDTYEL 183

Query: 192 TDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP 251
                         + WD           +RID I+ +      + S+++          
Sbjct: 184 AIEKDEGTTVQGKIAGWD------ENKHNLRIDLILCNQG--KTVRSSKVIFNGINRNVI 235

Query: 252 SDHTPVIVSLDI 263
           SDH  V V LDI
Sbjct: 236 SDHFGVEVQLDI 247


>gi|282880174|ref|ZP_06288894.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           timonensis CRIS 5C-B1]
 gi|281306047|gb|EFA98087.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           timonensis CRIS 5C-B1]
          Length = 267

 Score = 49.4 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 41/266 (15%), Positives = 66/266 (24%), Gaps = 35/266 (13%)

Query: 3   VVTVATWNVNSIRARIHNL-----AAWIKENNPDIICLQET-----KTEDKNFPFETLQS 52
            V V T+NV   R+   +      A  +K    D ICL E      + +      + +Q 
Sbjct: 21  TVKVITFNV---RSFEPDFDTKPYADLLKGEQADFICLNEVENRSSRQQKNGKFRDVVQE 77

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           L             G    S     +   +   +                   + + +  
Sbjct: 78  L------ALNLHMFGTFGYSYNLSNKQGEYPEANYKYCMNELYGNAILSRYPIMNVISKQ 131

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
           LP   P  S      I+         + R+         G                    
Sbjct: 132 LP--RPKGSADQRSVIAADVLLPSGKTIRIISTHLDHIGGQLEQAKVITSDEITSSTLPT 189

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                  +     + N   T   R  +D         Y   S        ID I  S   
Sbjct: 190 ILTGDMNQGVGSSVINQYLTRYERMDNDNG------TYMGMSK-------IDFIFGSKG- 235

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVI 258
              L S ++  +     + SDH PV+
Sbjct: 236 QWNLQSCKVLERFLNQKELSDHCPVL 261


>gi|222085749|ref|YP_002544279.1| hypothetical protein Arad_2072 [Agrobacterium radiobacter K84]
 gi|221723197|gb|ACM26353.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
          Length = 277

 Score = 49.4 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 23/52 (44%), Gaps = 2/52 (3%)

Query: 4  VTVATWNVNSIRARIHNLAAWIKENNPDIICLQE-TKTEDKNFPFETLQSLN 54
          + + + NV   R     L  ++ + + D++CLQE  +T D    +   +   
Sbjct: 11 LRIVSLNVWGGRLHEP-LMRYLVDIDADVLCLQEVVRTPDAEADWLVYRDHG 61


>gi|168180262|ref|ZP_02614926.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum NCTC 2916]
 gi|182668813|gb|EDT80791.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum NCTC 2916]
          Length = 263

 Score = 49.4 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 34/274 (12%), Positives = 74/274 (27%), Gaps = 25/274 (9%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYHI 57
           + + T N +S +      +I  LA  I ENN D+I LQE  ++ +    F+ ++  N+  
Sbjct: 1   MKILTLNCHSWQEEKQLEKIKYLAKVIYENNYDVIALQEVSQSINSKILFDNIKEDNFAF 60

Query: 58  E-TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT-------QTLRIG 109
                 +          +    I      + L +  +                    +  
Sbjct: 61  ILIKELEKLGENRFKILWDFAHIGYDKYEEGLAILTKHPIKEKKSFYISKSKDKNFWKTR 120

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
            +     +   +  Y                + ++ + +    +        D  N    
Sbjct: 121 KIIKCKIDYNNNPIYFYSCHLGWWDDEEEDFKSQVNKLVQELKEKETCILMGDYNNDAFL 180

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
            N     L  ++           D           +             K +R+D I+ +
Sbjct: 181 NNKGYDYLINKKLKDIYHLARSKDNGVTAIGDIDGW---------KGNTKNMRLDLILSN 231

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                 +   ++          SDH  V   ++I
Sbjct: 232 KNL--KVEYCKVIFNGIRKEIISDHFGVEAKIEI 263


>gi|147816006|emb|CAN72456.1| hypothetical protein VITISV_026051 [Vitis vinifera]
          Length = 1130

 Score = 49.4 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 32/235 (13%), Positives = 71/235 (30%), Gaps = 28/235 (11%)

Query: 26  KENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPG 85
           ++   D++C+QETK +        ++SL        +      A        +  +    
Sbjct: 106 RKQKVDLVCIQETKIQ--LMTDGVVKSLGVGRFLDWRTLEAAGAAGGVLICWDKRSLEML 163

Query: 86  DDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELE 145
           +  + Q        T+    + +               Y  K      +    + +    
Sbjct: 164 EWEEGQFSISCKFRTVENGAVWVFT---------GVYGYFTKEDRECLWDELGAVKGLWG 214

Query: 146 EPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY 205
           +P    GD+N+I    +             T  +R+  Q + ++   D           +
Sbjct: 215 DPWCVGGDFNVILAQGER------SRQGRVTPAMRRFAQVMDDLELIDJPLQ----GGSF 264

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
           ++    +         R+D  ++SP       +    T+ R     SDH P+ + 
Sbjct: 265 TW----SGGLHNQAWARLDRFLVSPIWLDQFSNV---TQKRLSRPISDHFPITIE 312


>gi|74007229|ref|XP_854893.1| PREDICTED: similar to LINE-1 reverse transcriptase homolog [Canis
           familiaris]
          Length = 1346

 Score = 49.4 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 40/110 (36%), Gaps = 12/110 (10%)

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
               + E R     L  M FTD  R  H     Y+F+     ++S     RIDHI+    
Sbjct: 229 KQNISKETRALNDTLDQMDFTDIYRTLHPNSTEYTFFSSAHGTFS-----RIDHILGHKS 283

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
             +      I          SDH  + + L+    +K  + S +  ++ I
Sbjct: 284 GLNRYQKIGIVPCI-----FSDHNALKLELN--HNKKFGRTSNTWRLRTI 326


>gi|270016062|gb|EFA12510.1| hypothetical protein TcasGA2_TC004208 [Tribolium castaneum]
          Length = 841

 Score = 49.4 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 18/34 (52%)

Query: 9   WNVNSIRARIHNLAAWIKENNPDIICLQETKTED 42
           WN N +RA  + L  ++     DI+ + ETK + 
Sbjct: 139 WNANGLRAARNELEEFVDRLQLDIVLVCETKLQP 172


>gi|254509579|ref|ZP_05121646.1| endonuclease/exonuclease/phosphatase family protein
           [Rhodobacteraceae bacterium KLH11]
 gi|221533290|gb|EEE36278.1| endonuclease/exonuclease/phosphatase family protein
           [Rhodobacteraceae bacterium KLH11]
          Length = 236

 Score = 49.4 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 34/273 (12%), Positives = 62/273 (22%), Gaps = 60/273 (21%)

Query: 2   SVVTVATWNVN---SI--RARIHNLAAWIKENNPDIICLQET--KTE--DKNFPFETLQS 52
           S + +A++N+     +  R +   +   I+    DI+ LQE   +        P   L  
Sbjct: 7   STLRLASYNIQKCVGLDLRRQPQRILQVIESLQADIVVLQEADKRLPPRPAALPHFMLDE 66

Query: 53  LNYHIETCGQKS----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108
             + I   G       +    I          T             +   F      LR+
Sbjct: 67  AGWQIVDLGGAGSLGWHGNAVIWRGDAIEVRQTGHHDLPGLEPRGAVRVEFDTQIGPLRV 126

Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168
             ++L  G    S +                  +   +   ++      P        + 
Sbjct: 127 MGMHL--GLLSASRRRQITHIRHCDSDLADMPTVWAGDFNEWSR----QPVLDHLAPDMR 180

Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
           +          +                                          +D I +
Sbjct: 181 FLPPVPSFPAAQPLGA--------------------------------------LDRIAV 202

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
                + LH        R     SDH PV   L
Sbjct: 203 GQGLEAALHGV---HNARPAHIASDHLPVWADL 232


>gi|189242197|ref|XP_972152.2| PREDICTED: similar to GH03753p, partial [Tribolium castaneum]
          Length = 841

 Score = 49.4 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 18/34 (52%)

Query: 9   WNVNSIRARIHNLAAWIKENNPDIICLQETKTED 42
           WN N +RA  + L  ++     DI+ + ETK + 
Sbjct: 136 WNANGLRAARNELEEFVDRLQLDIVLVCETKLQP 169


>gi|73999443|ref|XP_852480.1| PREDICTED: similar to LINE-1 reverse transcriptase homolog [Canis
           familiaris]
          Length = 1338

 Score = 49.4 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 40/110 (36%), Gaps = 12/110 (10%)

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
               + E R     L  M FTD  R  H     Y+F+     ++S     RIDHI+    
Sbjct: 221 KQNISKETRALNDTLDQMDFTDIYRTLHPNSTEYTFFSSAHGTFS-----RIDHILGHKS 275

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
             +      I          SDH  + + L+    +K  + S +  ++ I
Sbjct: 276 GLNRYQKIGIVPCI-----FSDHNALKLELN--HNKKFGRTSNTWRLRTI 318


>gi|330817173|ref|YP_004360878.1| Endonuclease/exonuclease/phosphatase [Burkholderia gladioli BSR3]
 gi|327369566|gb|AEA60922.1| Endonuclease/exonuclease/phosphatase [Burkholderia gladioli BSR3]
          Length = 289

 Score = 49.4 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 43/306 (14%), Positives = 81/306 (26%), Gaps = 67/306 (21%)

Query: 4   VTVATWNV-----NSIRARI-HNLAAWIKENNPDIICLQE-TKTED--------KNFPFE 48
           + +  WNV      S R  +   +A      + D++CLQE T+  D          F   
Sbjct: 1   MQLINWNVQWGRDASGRVDLGRTVAEARALADFDVLCLQELTRGFDSLPGGPGADQFAEL 60

Query: 49  TLQSLNY---------------HIETCGQKSYNGVAILSKYQPIEIVTHLPGDD-----L 88
                 Y                      +   G AI ++     I+ H           
Sbjct: 61  AALLPGYTVIEALAVDLPLDPGQAAAGAPRRQFGNAIATRLPVGRILRHTLPWPADDSVP 120

Query: 89  DVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQR------- 141
            +    +EA        LR+   +L   +        + +    R     ++        
Sbjct: 121 SMPRVALEANLQTAHGPLRVVTTHLEFYSGAQRMAQVEALREQHREAIDHARHPASAEKT 180

Query: 142 ------LELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAI 195
                        +  GD+N   +       +   + A        ++            
Sbjct: 181 GSAFTASARARDAVVCGDFNSAWRDDAYRRLLAPIDGA---PAFVDAWMHAHPGKTPPPT 237

Query: 196 RATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHT 255
              HDT        +   S +       D + ++      +    ID+  R     SDH 
Sbjct: 238 AGVHDTEQ------WRQGSLTC------DFVFVTETLRERILRCEIDSTTR----ASDHQ 281

Query: 256 PVIVSL 261
           P+++ L
Sbjct: 282 PILLEL 287


>gi|301165660|emb|CBW25231.1| putative endonuclease/exonuclease/phosphatase family protein
           [Bacteriovorax marinus SJ]
          Length = 256

 Score = 49.4 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 37/270 (13%), Positives = 73/270 (27%), Gaps = 27/270 (10%)

Query: 3   VVTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNF-PFETLQS 52
           ++ VA+ N+         N    R   L+  I    PD++  QE    +      + L  
Sbjct: 1   MLKVASTNIRFDNPADAPNDWAGRKSLLSELINNFAPDLLGTQE--GREPQLKDLDQLLP 58

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
            +  I+         +       P+ +     GD    +  +   T + ++   R+    
Sbjct: 59  AHTLIDGHRSWITERMYPCIFVNPLTVEVKESGDIWLSETPYEAGTKSFDSAFPRLCTWI 118

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                                       ++++    I   +   +P             D
Sbjct: 119 HGVFKDTKKEFIYVNTHLDHVKSHTRRSQIQVLISEIKKINTKSLPIILTGDFNESPAED 178

Query: 173 ACFTLEVRQSF-QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
               +    +           +   + H    ++            ++G RID I+    
Sbjct: 179 VREVINREWTNLYDAWQFLGKEEETSFHKFDGVH------------DEGSRIDWILTDRF 226

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
                 S  I  + R    PSDH PV  S 
Sbjct: 227 F--KTKSIEIIKEHREEIYPSDHFPVFASF 254


>gi|160885982|ref|ZP_02066985.1| hypothetical protein BACOVA_03988 [Bacteroides ovatus ATCC 8483]
 gi|156108795|gb|EDO10540.1| hypothetical protein BACOVA_03988 [Bacteroides ovatus ATCC 8483]
          Length = 366

 Score = 49.4 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 44/272 (16%), Positives = 81/272 (29%), Gaps = 33/272 (12%)

Query: 3   VVTVATWNVNSIR------ARIHNLAAWIKENNPDIICLQETKTEDK---NFPFETLQSL 53
           ++TVAT+NV++        +    +A++++    DI+C QE    D+   +     L   
Sbjct: 109 ILTVATYNVDAFNHEHTGYSC-KEIASYMRNLQADILCFQEFGINDEFGVDSIAAVLSDW 167

Query: 54  NYHIETCGQKSYNGV------AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107
            Y+      +  + +          K + + +        L         T  +    L+
Sbjct: 168 PYYYIPISPEGKHLLQLAVFSRYPIKEENLIVYPDSKNCSLWCDIETNARTIRLFNNHLQ 227

Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167
              +             DD     +  L       E         +          Y  I
Sbjct: 228 TTEVSQNKRKLEKGLHTDDSQRVERAALGLIDGLHENFRKRAVQANTLKQLIAASPYPTI 287

Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227
           I   D               +        + H    +Y+F       + K+  +RID+I+
Sbjct: 288 I-CGDFNSLPSSYVYHTVKGDKLQDGFQTSGHGY--MYTF------KFFKHL-LRIDYIL 337

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
            SPE  S                 SDH PV++
Sbjct: 338 HSPELNST-------DYFSPDLTYSDHNPVVM 362


>gi|73973206|ref|XP_536892.2| PREDICTED: similar to LINE-1 reverse transcriptase homolog [Canis
           familiaris]
          Length = 1385

 Score = 49.4 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 40/110 (36%), Gaps = 12/110 (10%)

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
               + E R     L  M FTD  R  H     Y+F+     ++S     RIDHI+    
Sbjct: 268 KQNISKETRALNDTLDQMDFTDIYRTLHPNSTEYTFFSSAHGTFS-----RIDHILGHKS 322

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
             +      I          SDH  + + L+    +K  + S +  ++ I
Sbjct: 323 GLNRYQKIGIVPCI-----FSDHNALKLELN--HNKKFGRTSNTWRLRTI 365


>gi|154270414|ref|XP_001536062.1| predicted protein [Ajellomyces capsulatus NAm1]
 gi|150409989|gb|EDN05377.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 954

 Score = 49.4 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 28/75 (37%), Gaps = 8/75 (10%)

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           + W           G  ID   LSP     L    I  +     K SDH P+  +L++  
Sbjct: 100 TTWQDRGSP-----GTTIDLTFLSPLLHDKLRRCAIAEEA---CKGSDHKPIETTLELTP 151

Query: 266 PRKKQQDSTSQNMKP 280
             K+ +    +N +P
Sbjct: 152 IPKEAERRNWKNAEP 166


>gi|189069263|dbj|BAG36295.1| unnamed protein product [Homo sapiens]
          Length = 423

 Score = 49.4 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 43/297 (14%), Positives = 89/297 (29%), Gaps = 37/297 (12%)

Query: 4   VTVATWNVNSI------RA-RIHNLAAWIKENNPDIICLQETKT-EDKNFPFETLQS-LN 54
           + +   N   I      RA R+  L  ++ + + D+  L+E  + +D  +  + L     
Sbjct: 9   LRIFNLNCWGIPYLSKHRADRMRRLGDFLNQESFDLALLEEVWSEQDFQYLRQKLSPTYP 68

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN---- 110
                      +G+ + SK+   E+   +   +           F+     L + +    
Sbjct: 69  AAHHFRSGIIGSGLCVFSKHPIQELTQRIYTLNGYPYMIHHGDWFSGKAVGLLVLHLSGM 128

Query: 111 -------LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                        N         +++      +F     +  + ++  GD N+ P+   C
Sbjct: 129 VLNAYVTHLHAEYNRQKDIYLAHRVAQAWELAQFIHHTSKKADVVLLCGDLNMHPEDLGC 188

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223
                W       LE R      +                                G+RI
Sbjct: 189 CLLKEWTGLHDAYLETRDFKGSEEGNTMVPKNCYVSQQEL-----------KPFPFGVRI 237

Query: 224 DHIM---LSPEATSLLHSARIDT--KPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTS 275
           D+++   +S        S    T   P   T  SDH  ++ +L +     +Q  S++
Sbjct: 238 DYVLYKAVS-GFYISCKSFETTTGFDPHRGTPLSDHEALMATLFVRHSPPQQNPSST 293


>gi|58583572|ref|YP_202588.1| hypothetical protein XOO3949 [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|58428166|gb|AAW77203.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
           KACC10331]
          Length = 342

 Score = 49.4 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 33/271 (12%), Positives = 65/271 (23%), Gaps = 26/271 (9%)

Query: 4   VTVATWNV------NS---IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           + V ++NV      +       R  ++ A IK+ +PD+   QE   E   +    L +  
Sbjct: 89  LRVMSFNVRVPMDSDGDKRWTVRRTSMVALIKQAHPDVFGTQELVQEQAQYLASHLPAYR 148

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           +  +       +    +        V       L        ++         +      
Sbjct: 149 WFGKGRRADGSDEHMGVFYDSNALSVIESGDFWLSEIPEIPGSSSWNTDLPRMVTWALFE 208

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
             N                  R   +        +       +P          + +D  
Sbjct: 209 RRNDKRRFYL----LNTHLPHRDQDEAAREHVARVILSRIATLPADIPVVVTGDFNSDPD 264

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
                  +             +    T   ++               RID I+     T 
Sbjct: 265 QGTYRTLTAVLGDARAHVAKPQGPEKTFQNFTTQPTR----------RIDWILF-RGLTP 313

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
                       G   PSDH PV+ + + P+
Sbjct: 314 --TRFSTLDARSGGILPSDHYPVLAAFEWPQ 342


>gi|256419904|ref|YP_003120557.1| endonuclease/exonuclease/phosphatase [Chitinophaga pinensis DSM
           2588]
 gi|256034812|gb|ACU58356.1| Endonuclease/exonuclease/phosphatase [Chitinophaga pinensis DSM
           2588]
          Length = 371

 Score = 49.4 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 40/280 (14%), Positives = 84/280 (30%), Gaps = 43/280 (15%)

Query: 4   VTVATWNVN--SI------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55
           +T+ ++NV    +      +     + A IK+   DI+CLQ+  T +K   F   +    
Sbjct: 105 LTIMSYNVAQFGLYREKDSKYNREAMFALIKKQELDIVCLQDFYTSEKKNDFNNRED--- 161

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ-TLRIGNLYLP 114
              +   K           +                 +  +   +   +    I    + 
Sbjct: 162 --ISREMKLPYRFFSSDFNRDGMQHWGSIIYSRYPIIKSDKLKMSYGPRSESLIYADIVK 219

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
           +G+ I                  + ++++ +E        NI+ +  D Y     + D  
Sbjct: 220 NGDTIRIINMHLASYRFNERDYRSIEKIKKQEDTGLVATRNIVQKMRDAYVDRSKQADIV 279

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYA---DSW-SKNKG---------- 220
                   +               +DT   Y+++       D++  K  G          
Sbjct: 280 SAFISTCPYP-------VILCGDFNDTPASYTYFTIRGDLQDAFLRKGSGIGRTYAGLAP 332

Query: 221 -IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
            +RID+I              +++  +  +  SDH PVI 
Sbjct: 333 TLRIDYIFTDKSFK-------VNSFRKINSTLSDHYPVIA 365


>gi|281352921|gb|EFB28505.1| hypothetical protein PANDA_007799 [Ailuropoda melanoleuca]
          Length = 113

 Score = 49.4 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/94 (21%), Positives = 34/94 (36%), Gaps = 12/94 (12%)

Query: 188 NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRG 247
            +   D  R  H     YSF+     ++S     RIDH++      S      I      
Sbjct: 17  ELDLIDIYRTLHPRTKEYSFYSNAHGTFS-----RIDHVLGHKTGLSQYQKIEIIPCI-- 69

Query: 248 WTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
               SDH  + + L+     K  ++S +  ++ I
Sbjct: 70  ---FSDHNALKLELN--HKEKPGRNSNTWRLRTI 98


>gi|84387306|ref|ZP_00990326.1| putative phospholipase C precursor [Vibrio splendidus 12B01]
 gi|84377755|gb|EAP94618.1| putative phospholipase C precursor [Vibrio splendidus 12B01]
          Length = 444

 Score = 49.4 bits (116), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 38/285 (13%), Positives = 81/285 (28%), Gaps = 43/285 (15%)

Query: 2   SVVTVATWNVNSIRA-------RIHNLAAWIKENNPDIICLQETKTE-DKNFPFETLQSL 53
           + + V T+N+ ++ A       R   +  ++K    D++ LQE        F  E  +  
Sbjct: 179 NTLKVMTYNIWALPAIASHIGDRYDLIPKYVK--GYDVLALQEVFANGRDEFLRELAKEY 236

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
            Y  +   +   N             + +                         I N   
Sbjct: 237 PYQTKMLDKDGINIYDGGVIIVSRYPIVNEAQYVFPDCTGTDCFADKGVNYAEVIKNGQA 296

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
            H     +  +D   +   R         + ++    A    I       Y+     N  
Sbjct: 297 YHVFGTHTASFDTNTARDYRQ-------RQFKQMRQLAQSLEIPTSETVIYSGDFNVNK- 348

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYS--FWDYYADSWS-------KNKGIRID 224
                                ++A    +  Y+   +D   ++++       +N    +D
Sbjct: 349 --------LKFPGDYQQMFANLQADEPEYSGYTASTFDPRINNFAGEPMSGGENVEY-LD 399

Query: 225 HIMLSPEATSLLHSA-RID------TKPRGWTKPSDHTPVIVSLD 262
           ++++S E     H+  R+D      ++       SDH PV   + 
Sbjct: 400 YVVVSSEYAQKTHNNNRVDVPRSTSSELWKHYNLSDHFPVSAVIK 444


>gi|324515144|gb|ADY46104.1| Neutral sphingomyelinase [Ascaris suum]
          Length = 426

 Score = 49.4 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 38/268 (14%), Positives = 68/268 (25%), Gaps = 39/268 (14%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTED--KNFPFETLQSLNYHIETCGQKSYNGVAILSKY 74
           R+  L   +   N DII LQE  +                Y        + +GV I S++
Sbjct: 39  RLSKLCEALLSTNYDIISLQEIWSVRDFDRINSAIKDVYPYSYYFHSGFTGSGVCIFSRH 98

Query: 75  QPIEIVTHLPGDDLDVQARFIEATFTINTQTLR-----------IGNLYLPHGNPITSTK 123
             +  + H    +           F      +                     +      
Sbjct: 99  AIVSTLMHRYSLNGFAHHIHRGDWFGGKVVGMVQLEIGTYRINFYATHLHAEYDRENDLY 158

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
              ++S      +F        +  I  GD+N+ P        +   N       +  ++
Sbjct: 159 LPHRLSQAFELSQFVKHTSHAADLTILTGDFNLEPDDLGYRLIVDNAN-------LIDAW 211

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID- 242
               N    +         + Y+             G R+D+IM           + +D 
Sbjct: 212 LARPNKSGCETGMTCDRPDNCYT---ARNLKQPNPAGKRLDYIM------YKCGKSDVDL 262

Query: 243 --TKPRGWTKP-------SDHTPVIVSL 261
              + R    P       SDH  V    
Sbjct: 263 VMCENRLGRIPGDKQINYSDHLGVYADF 290


>gi|261408212|ref|YP_003244453.1| endonuclease/exonuclease/phosphatase [Paenibacillus sp. Y412MC10]
 gi|261284675|gb|ACX66646.1| Endonuclease/exonuclease/phosphatase [Paenibacillus sp. Y412MC10]
          Length = 494

 Score = 49.4 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 37/287 (12%), Positives = 79/287 (27%), Gaps = 30/287 (10%)

Query: 4   VTVATWNVNSIRARIHNLAAW----------IKENNPDIICLQETKTEDKNFPFETLQSL 53
           + V ++N   +R   ++   W          I E+ PD+I  QE     +          
Sbjct: 38  LKVMSFN---LRYAANDSQPWENRRPVTRNLILEHQPDVIGTQE--GLHRQIVDLENDLP 92

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
            Y     G++  +    ++ +   + +T L      +       +       +     ++
Sbjct: 93  GYDRIGVGREGGSLGEYMAIFYNTDRLTPLEQSHFWLSDTPQTISSASWGNQIPRMATWV 152

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
              +      +      +   L   S+    +   +                   +    
Sbjct: 153 RFQDLRNGKTF----YMVNTHLDHQSEVSRQKSAALIVDKMKAFDPDIPVVITGDFNTLP 208

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
                   +   L +   T   R   D    +++ D          G RID I+      
Sbjct: 209 GSDTYSIFTSNGLSDAHVTAKKRTNDDLGTFHNYKDPTGGG----SGNRIDWILHGQGW- 263

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
             +  + I         PSDH PV++         +Q + T+    P
Sbjct: 264 -NILHSEIINYKEDGQYPSDHYPVMME-----GTLQQSNKTTGETVP 304


>gi|126660414|ref|ZP_01731524.1| hypothetical protein CY0110_01310 [Cyanothece sp. CCY0110]
 gi|126618280|gb|EAZ89039.1| hypothetical protein CY0110_01310 [Cyanothece sp. CCY0110]
          Length = 125

 Score = 49.4 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 22/63 (34%), Gaps = 17/63 (26%)

Query: 217 KNKGIRIDHIMLSPEATSL------LHSARID-----------TKPRGWTKPSDHTPVIV 259
           +  G  IDHI++S E          +  + ID              R     SDH P+  
Sbjct: 61  RGNGELIDHILVSKELLPGNPPQTPVVDSHIDGLGSLPSISEQPSQRRGEPGSDHAPITA 120

Query: 260 SLD 262
           + D
Sbjct: 121 TFD 123


>gi|322805921|emb|CBZ03486.1| exodeoxyribonuclease III [Clostridium botulinum H04402 065]
          Length = 263

 Score = 49.4 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 39/268 (14%), Positives = 79/268 (29%), Gaps = 13/268 (4%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYHI 57
           + + T N +S +      +I  LA  I ENN D+I LQE  ++ +    F+ ++  N+  
Sbjct: 1   MKILTLNCHSWQEEKQLEKIKYLAKVIYENNYDVIALQEVSQSINSKILFDNIKEDNFAF 60

Query: 58  E-TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT-INTQTLRIGNLYLPH 115
                 +          +    I      + L +  + +            +  N +   
Sbjct: 61  ILIKELEKLGENRFKILWDFAHIGYDKYEEGLAILTKHLIKEKKSFYISKSKDKNFWKTR 120

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
                   Y++   +            E +           + Q   C     + NDA  
Sbjct: 121 KVIKCKIDYNNNPIYFYSCHLGWWDDEEEDFKFQANKLIEDLKQDETCILMGDYNNDAFL 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
                + +  L N    D         +  +            K +R+D I+ +      
Sbjct: 181 ---NNKGYDYLINKKLKDIYHLARSKDNGVTAIGDIDGWKGNTKNMRLDLILSNKNL--K 235

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +   ++          SDH  V   ++I
Sbjct: 236 VEYCKVIFNGIRKEIISDHFGVEAKIEI 263


>gi|260788648|ref|XP_002589361.1| hypothetical protein BRAFLDRAFT_218091 [Branchiostoma floridae]
 gi|229274538|gb|EEN45372.1| hypothetical protein BRAFLDRAFT_218091 [Branchiostoma floridae]
          Length = 275

 Score = 49.4 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 34/258 (13%), Positives = 75/258 (29%), Gaps = 17/258 (6%)

Query: 16  ARIHNLAAWIKENNPDIICLQETKTE--DKNFPFETLQSLNYHIETCGQKSYNGVAILSK 73
           AR   +   +     D++ LQE  ++   +    +    L YH         +G+ + S+
Sbjct: 24  ARFQAIGEELCTGRYDVVSLQEVWSQYVYEEMVSQVQDVLPYHHYFYSGWHGSGLCVFSR 83

Query: 74  YQPIEIVTHLPGDDLDVQARFIEATFTINT---QTLRIGNLYLPHGNPITSTKYDDKISW 130
           Y  I    H    +           +         +R     +      T T+Y+ +   
Sbjct: 84  YPIIGSHQHRFTLNGFPHKPHHPDWYGGKMAGLCQVRHPGAEINIYVTHTHTEYNHENDK 143

Query: 131 IKRFLRFASQRLELEEPLI-FAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNM 189
            K      +  L           D NI+    +     +          +  ++   ++ 
Sbjct: 144 DKAHRVSQAFELSQFIRHTGQCADVNILAGDLNNQPFELGLKIIQSNTGMEDAWLTAEHR 203

Query: 190 GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM--LSPEATSLLHSAR--IDTKP 245
              D+    +   + ++ +  Y          R D+++   S             +   P
Sbjct: 204 NAEDSGLTWNLDDNNFTCYPDYPPC-------RYDYVLYKGSARCRVKCVHCETTMHKVP 256

Query: 246 RGWTKPSDHTPVIVSLDI 263
                 SDH  V+  L++
Sbjct: 257 GKPFNYSDHEGVVAHLEL 274


>gi|147834770|emb|CAN72707.1| hypothetical protein VITISV_043786 [Vitis vinifera]
          Length = 1372

 Score = 49.4 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/240 (11%), Positives = 71/240 (29%), Gaps = 28/240 (11%)

Query: 21  LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80
           + + +++   D++C+QETK +        ++SL        +      A        +  
Sbjct: 186 IKSVVRKQKVDLVCIQETKIQA--MTDGVVKSLGVGRFLDWRTLEATGAAGGVLVCWDKR 243

Query: 81  THLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQ 140
           +    +  + Q        T+   T+ +        N                +    + 
Sbjct: 244 SLDLLEWEEGQFSVSCKFRTVENGTVWVFTGVYGPFNKKDRECL---------WEELGAV 294

Query: 141 RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHD 200
           R    +P    GD+N+             + +      V  + ++   +     +     
Sbjct: 295 RGLWGDPWCVGGDFNVTLA----------QGERSRQGRVTSAMRRFAQVMDDLELIDLPL 344

Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
               +++    +         R+D  +++P       +    T+ R     SDH P+ + 
Sbjct: 345 QGGSFTW----SGGLYNQAWARLDRFLVAPRWLDQFSNV---TQKRLSRPISDHFPITIE 397


>gi|118462542|ref|YP_883226.1| endonuclease/exonuclease/phosphatase [Mycobacterium avium 104]
 gi|118163829|gb|ABK64726.1| endonuclease/exonuclease/phosphatase [Mycobacterium avium 104]
          Length = 252

 Score = 49.4 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 32/267 (11%), Positives = 75/267 (28%), Gaps = 31/267 (11%)

Query: 7   ATWNV-------NSIRARIHNLAAWIKENNPDIICLQET-----KTEDKNFPFETLQSLN 54
           AT+N+       + +   +  L   I+  +PD++ LQE      ++E  +      +++ 
Sbjct: 2   ATFNILHGRTVGDGV--IVERLRDCIRRLDPDVLSLQEVDCDQPRSEHADLTGAAAEAMG 59

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
                   +    ++       +                 +      + Q LR+  + + 
Sbjct: 60  ----AVEHRFVAAISGTPGATWMAATGDEQPGTAAYGIALLSRYPVASWQVLRLPRIPMR 115

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
               +        +    R    A  R  + E  +     + +P  +      +  +   
Sbjct: 116 FPMYLPGPNRVMIVDEEPRAAVIAQLRTPIGELTVANTHLSFVPGWNRRQLRRLIRDLRG 175

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
                  +                    +  +F        + N   ++DHI+       
Sbjct: 176 LPGPRLLTGDLNMTPQTVRRWSGMRALGNAKTFP-------ADNPNRQLDHILTDDR--- 225

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261
            L  A +          SDH P++V L
Sbjct: 226 RLRCAAVQADLM---PISDHRPLVVDL 249


>gi|226225952|ref|YP_002760058.1| hypothetical membrane protein [Gemmatimonas aurantiaca T-27]
 gi|226089143|dbj|BAH37588.1| hypothetical membrane protein [Gemmatimonas aurantiaca T-27]
          Length = 465

 Score = 49.4 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 33/264 (12%), Positives = 62/264 (23%), Gaps = 20/264 (7%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + + N         +L   +    P ++  QE   E            ++        
Sbjct: 212 LRILSLNAQGGGVVQQHLDEMMAAYTPSVMAFQECGRELGQ-NLAKRAEWHFEQFHNLCL 270

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
                       P      +        A  I  T         + NL+L          
Sbjct: 271 LSRWPVTQRDSMPRAAFARISDLGYGGAAIVIRYTIAHPAGPFELVNLHLETARKGLEGI 330

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD--CYNPIIWENDACFTLEVRQ 181
             D+                  +      D  +                       +   
Sbjct: 331 LGDQGLLRDDTGLPNVPASLETDRFAINADIRLRESERASYWSARHANTTPIVVVGDFNM 390

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI----RIDHIMLSPEATSLLH 237
             +      +  A+ +  D              ++K++G     RIDH++ +P+      
Sbjct: 391 PVESSIFRAYWSALSSAFDAGG-------RGFGFTKHEGRWLRIRIDHVLFAPQWFET-S 442

Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261
            A +     G    SDH PVI  L
Sbjct: 443 GAWV-----GNDVGSDHRPVIADL 461


>gi|322491121|emb|CBZ26386.1| endonuclease/exonuclease protein-like protein [Leishmania
          mexicana MHOM/GT/2001/U1103]
          Length = 736

 Score = 49.4 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 7/43 (16%)

Query: 4  VTVATWNVNS-------IRARIHNLAAWIKENNPDIICLQETK 39
          + + +WNV         IR    ++  +    + DIICLQE K
Sbjct: 1  MFLISWNVAGWSSTSQAIRESFGSIHDFFACTDADIICLQECK 43



 Score = 47.1 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 17/37 (45%)

Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
               Y+ WD   +   +N+G R+D+I++       + 
Sbjct: 473 CPCPYTCWDQSRNRRLENEGTRLDYILVDSALLPAVV 509


>gi|149187109|ref|ZP_01865414.1| metal-dependent hydrolase [Erythrobacter sp. SD-21]
 gi|148829261|gb|EDL47707.1| metal-dependent hydrolase [Erythrobacter sp. SD-21]
          Length = 233

 Score = 49.4 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 36/269 (13%), Positives = 69/269 (25%), Gaps = 50/269 (18%)

Query: 4   VTVATWNVN---SI-RAR-IHNLAAWIKENNPDIICLQE----TKTEDKNFPFETLQSLN 54
           +T A++N++    + R R    + + + E + DII LQE        +   P   +    
Sbjct: 3   LTFASYNIHKAVGLDRKRDPERILSVLHEIDADIIALQEADRRIGARESCLPRSEIDD-- 60

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
                            S ++ +E+            A  +   F ++           P
Sbjct: 61  -----------------SHWRLVEVAKRPRSIGWHGNALLVRRNFEVHEGEALDLPTLEP 103

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
            G        +     I       S     ++     G                      
Sbjct: 104 RGAACGEITVEGHRLRIIGTHLDLSGLRRRDQIRSLVGFVE---------KCSRNLPTVI 154

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
                +          F+D            S+      +        +D I+ S     
Sbjct: 155 MGDFNQWGRATGAMREFSDRWLVVTPGR---SYPSRQPVAT-------LDRIVASKHWG- 203

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
               A +    +     SDH PV+ +LD+
Sbjct: 204 -CVEAEVHHTGQSSV-ASDHLPVVATLDL 230


>gi|170755058|ref|YP_001781240.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum B1 str. Okra]
 gi|169120270|gb|ACA44106.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum B1 str. Okra]
          Length = 263

 Score = 49.4 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 41/268 (15%), Positives = 81/268 (30%), Gaps = 13/268 (4%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYHI 57
           + + T N +S +      +I  LA  I ENN D+I LQE  ++ +    F+ ++  N+  
Sbjct: 1   MKILTLNCHSWQEEKQLEKIKYLAKVIYENNYDVIALQEVSQSINSKILFDNIKEDNFAF 60

Query: 58  E-TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFI-EATFTINTQTLRIGNLYLPH 115
                 +          +    I      + L +  +   +   +      +  N +   
Sbjct: 61  ILIKELEKLGENRFKILWDFAHIGYDKYEEGLAILTKHSVKEKDSFYISKSKDKNFWKAR 120

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
                   Y +K   +           E +           + Q   C     + NDA  
Sbjct: 121 KIIKCKIFYKNKPILVYSCHLGWWNDKEEDFKFQANKLIEDLKQDETCILMGDFNNDAFL 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
                + +  L N  F D         +  +            K +R+D I+ +      
Sbjct: 181 ---NYRGYDYLINKNFKDIYHLARSKDNGVTVIGDIDGWKGNTKNMRLDLILSNKNL--K 235

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +   ++          SDH  V   ++I
Sbjct: 236 VEYCKVIFNGIRKEIISDHFGVEAKIEI 263


>gi|147844821|emb|CAN79026.1| hypothetical protein VITISV_022897 [Vitis vinifera]
          Length = 1241

 Score = 49.4 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 3/43 (6%)

Query: 1   MSVVTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTE 41
           M V  + +WNV      ++   +  +I+  + D+IC+QETK +
Sbjct: 933 MKV-KILSWNVRGANDSSKRKVIKTFIRNQSVDLICIQETKIQ 974


>gi|1196432|gb|AAA88037.1| unknown protein [Homo sapiens]
          Length = 1192

 Score = 49.4 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 23/92 (25%), Positives = 33/92 (35%), Gaps = 12/92 (13%)

Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR 246
                 D  R  H     Y+F+     ++SK     IDHI+ S    S      I T   
Sbjct: 90  HQADLIDIYRTLHPKSTEYTFFSAPHHTYSK-----IDHIVGSKALLSKCKRTEIITNYL 144

Query: 247 GWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278
                SDH+ + + L I      Q  ST+  +
Sbjct: 145 -----SDHSAIKLELRI--KNLTQSRSTTWKL 169


>gi|71017527|ref|XP_758994.1| hypothetical protein UM02847.1 [Ustilago maydis 521]
 gi|46098772|gb|EAK84005.1| hypothetical protein UM02847.1 [Ustilago maydis 521]
          Length = 525

 Score = 49.4 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 54/359 (15%), Positives = 96/359 (26%), Gaps = 86/359 (23%)

Query: 4   VTVATWNVNSIR-------ARIHNLAAWIKENN---PDIICLQETK--TEDKNFPFETLQ 51
           +++ T NV  ++       ARI  +A+ +  ++    D +CLQE    + D  F    L 
Sbjct: 39  LSILTLNVWGLKYISKLRIARIKAIASRLASSDMPLYDFVCLQEIWYESRDWRFLKHALS 98

Query: 52  SLNYHI-ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT----- 105
           S   H          +G+AILS++  +E  TH    +           F           
Sbjct: 99  SRYPHSKFFYSGAFGSGLAILSRWNILETRTHPYSLNGQPIHVHHGDWFVGKACGSVTIN 158

Query: 106 ------LRIGNLYLPHGNPITSTKYDDKISWIKRFL--RFASQRLELEEPLIFAGDYNII 157
                 + + N +          +Y       + +               ++  GD N  
Sbjct: 159 HPRLGLVDVWNTHFVAAGGEDGPEYKRSHRITQAYELAANCRNSASKGRHVVCVGDLNST 218

Query: 158 PQ-------PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL------ 204
           P         H       + +      E   S    +                       
Sbjct: 219 PPSLAIGLLRHIGGLYDSFLDTRPQLPEHAVSLDPEETSTQVGDRATAAPDPQRAIEELG 278

Query: 205 -------YSFW-----DYYADSWSKNKGIRIDHIM-----------------LSPEATSL 235
                   ++      D  A   S+  G R+D+I                  +S      
Sbjct: 279 VTCDSPLNTWTAGKPLDERA---SRGAGKRLDYIFYRGPVDQQHSSESNASTVSSALAYS 335

Query: 236 ----------LHSARI---DTKPRGWTKPSDHTPVIVSLDI--PEPRKKQQDSTSQNMK 279
                       S+ +   DT P      SDH  V  + DI  P        ++  + +
Sbjct: 336 ASHSTRGRLTCKSSSVVITDTIPEHLCSYSDHFGVASTFDILPPSSGAPSPTASDSDAR 394


>gi|150025222|ref|YP_001296048.1| hypothetical protein FP1150 [Flavobacterium psychrophilum JIP02/86]
 gi|149771763|emb|CAL43237.1| Protein of unknown function [Flavobacterium psychrophilum JIP02/86]
          Length = 348

 Score = 49.4 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 45/273 (16%), Positives = 74/273 (27%), Gaps = 40/273 (14%)

Query: 6   VATWNVNSIRARIHNLAAWI-------------KENNPDIICLQETKTEDKNFPFETLQS 52
           V ++NV     R+ NL  WI              ENNPD++C+QE  +       +    
Sbjct: 102 VMSYNV-----RLLNLFNWIPRDNVAQDILHFVNENNPDLLCIQEY-STSAKIDLKI--- 152

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
             Y   +   K        + +    IV        +     I A   I    +R+ N++
Sbjct: 153 --YPYSSIVMKGKKIRTGQAIFSKFPIVNEGELAFPESNNNAIFADIKIGKDLVRVYNIH 210

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
           L         K  ++        +       + E          I   H           
Sbjct: 211 LQSIKISPDVKEINENVEGINKQKSQIIFNRISEAFKKQQQQGEIIMNHKKSCKYPIIIC 270

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL-YSFWDYYADSWSKNKGIRIDHIMLSPE 231
                       +       D            YSF  Y A         RID+I  + +
Sbjct: 271 GDMNNSAFSYVYRSIKGNMQDCFEQAGKGFGQTYSFKYYPA---------RIDYIFANSK 321

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
               + +             SDH P++  L + 
Sbjct: 322 M--RVKNFTNFPD----FVNSDHLPIMTRLSVD 348


>gi|298491351|ref|YP_003721528.1| endonuclease/exonuclease/phosphatase ['Nostoc azollae' 0708]
 gi|298233269|gb|ADI64405.1| Endonuclease/exonuclease/phosphatase ['Nostoc azollae' 0708]
          Length = 256

 Score = 49.4 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 40/269 (14%), Positives = 77/269 (28%), Gaps = 29/269 (10%)

Query: 4   VTV--ATWNVN------SIRARIHNLAAW---IKENNPDIICLQETKTEDKNFPFETLQS 52
           + +   ++N+        +R     + A    I+   PD+I  QE KT   +     L  
Sbjct: 1   MKITVMSFNLRYDKPDSGVRQWEKRIGAIASVIQHYQPDLIGTQEGKTPQLSNLQALLPE 60

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
             +                 + +   +  +    +L     F  +       ++      
Sbjct: 61  YKF--------IGGDRTGTGEGEHCAVFYNPQRLELQQTKDFYLSDTPEIPGSITWDTRL 112

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                    T  +  IS          +  +  E         ++  P + Y  +  + +
Sbjct: 113 PRMATWANFTVGNPSISLTIVNTHLDHENAKARELGAALVILRLMEFPSEDYLLLTGDFN 172

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
           A        +   L +        AT       +F ++  ++W       ID I      
Sbjct: 173 AN---PTTLARMILADNYKIQDALATLPLDKQKTFHEFTGEAWDA-----IDTIYCDRRF 224

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
              +    ID +      PSDH PVIV L
Sbjct: 225 --QIEQVIIDRQQWEDIWPSDHFPVIVKL 251


>gi|256074176|ref|XP_002573402.1| cript-related [Schistosoma mansoni]
 gi|238658581|emb|CAZ29634.1| cript-related [Schistosoma mansoni]
          Length = 427

 Score = 49.4 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 36/282 (12%), Positives = 85/282 (30%), Gaps = 32/282 (11%)

Query: 1   MSVVTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55
           + ++ V +WN+  +       R+ ++   IK+    ++CLQE          E L+S  Y
Sbjct: 53  LPIINVLSWNIQGLELANLNKRMMSVVETIKKEEFHVVCLQEVILVCLEILREKLES-TY 111

Query: 56  HIETCGQKSYNG----VAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
           HI +    +       V ++ K+  I++ T          +       +I+    +    
Sbjct: 112 HIFSASDHNSLWDYFVVILVKKHPDIKVDTDSVSIQPFPNSVMNRHLLSIDLNLSQFLPK 171

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
                N    T + +  +          + +            +         +    + 
Sbjct: 172 SNLELNLRIFTAHLESCAEYSGERVTQLKSVWDTMSSYVNCGDSKASSNRGRASIFCGDL 231

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYA-DSWSKNKGI-------RI 223
           +   +                +      +  +  ++      ++  + +GI       R 
Sbjct: 232 NLRDSEVCVLGGLPYGIHDVWNECGCRTEIRN--TWDPLRNQNARRQFRGIPRAHMTFRY 289

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTK-------PSDHTPVI 258
           D + +     S +    +D   RG  K       PSDH  ++
Sbjct: 290 DRMYV---LGSRIK--PVDFGLRGIEKVRNLSCLPSDHWAIL 326


>gi|325109514|ref|YP_004270582.1| endonuclease/exonuclease/phosphatase [Planctomyces brasiliensis DSM
           5305]
 gi|324969782|gb|ADY60560.1| Endonuclease/exonuclease/phosphatase [Planctomyces brasiliensis DSM
           5305]
          Length = 329

 Score = 49.4 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 38/289 (13%), Positives = 77/289 (26%), Gaps = 33/289 (11%)

Query: 4   VTVATWNVNSIR--------ARIHNLAAWIKENN--PDIICLQETKTEDKNFPFETLQSL 53
           + V TWNV S R        A I      ++  +   D+I L E          +   + 
Sbjct: 22  IKVLTWNVESNRDNRTTNNPAVIARKLKLLQSTSGPYDLIGLTEVAASSAGTYTDAFAAD 81

Query: 54  N--YHIETCGQKSYNGVAILSKYQPIEIVTH-------------LPGDDLDVQARFIEAT 98
              Y        + + + IL +     I  +              PG             
Sbjct: 82  GLEYRAFLSASGNTDRMLILVRDDRFTIEGNRAEELQNDGGSILFPGGSARQPFVVTVTD 141

Query: 99  FTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP 158
              +  T R    +L  GN  +  +    +    R  R     + + +        N+  
Sbjct: 142 SKNDDLTFRFMVNHLNRGNSNSRQQQAKGLREWAR--RQTLPVVAVGDYNFDFDFRNLTG 199

Query: 159 QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYS---FWDYYADSW 215
            P       +   +    +           +     +         ++   ++D   D +
Sbjct: 200 NPSMSMFMRLDPAERGLFVWNWIIPNATFTVDGATDVTRKIKLDVTFTDSNWYDPQRDGF 259

Query: 216 SKNKGIRIDHIMLSPEATSLLHSARIDT---KPRGWTKPSDHTPVIVSL 261
              +   +D I ++  A +    + +             SDH PV  + 
Sbjct: 260 DDFRDSLLDFIFVAGPARNWAARSNVIQLPGDFPDNDHTSDHRPVDATF 308


>gi|34392566|dbj|BAC82613.1| pol-like protein [Danio rerio]
          Length = 1284

 Score = 49.4 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 39/271 (14%), Positives = 84/271 (30%), Gaps = 41/271 (15%)

Query: 6   VATWNVNS---IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + ++N      IR +   +    K    D+I LQET   ++    + ++           
Sbjct: 23  IVSFNARGLLDIR-KFEKVKEMCKRE--DVILLQETNWREE--CMKEIRKRWSGEMLYNN 77

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
                   ++                D + + +        + + + N++ P        
Sbjct: 78  GDGRLGRGVAILLKENSGVLCKTIYNDKEGKCMICEMEYVKKKVIMVNVHAPTEENKKKE 137

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
            Y+                L+  E +I  GD+N +    +    ++++ D       ++ 
Sbjct: 138 YYN-----------VLRDYLKKHERVIIMGDFNTVFSKLEMAEGMVFKTD----KGRKEL 182

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG-----IRIDHIMLSPEATSLLH 237
              ++ M   D  R  ++    YS          +  G      RID I+ +        
Sbjct: 183 KILMEEMNLIDVWRERNEQTKEYS--------RRQIVGNFCCQTRIDFILCTRN-----V 229

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268
              I+      T  SDH P+ + LD    ++
Sbjct: 230 EGFINKIKYEETSLSDHKPLFMKLDWSNVKR 260


>gi|270017092|gb|EFA13538.1| hypothetical protein TcasGA2_TC002170 [Tribolium castaneum]
          Length = 363

 Score = 49.4 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 40/257 (15%), Positives = 68/257 (26%), Gaps = 49/257 (19%)

Query: 9   WNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGV 68
           WN NS++ +I  L A++  NN DI+ + ETK      P +     NY+I    +      
Sbjct: 10  WNANSVKQKIDELIAFLHSNNVDILAISETKLT----PNDRFYIQNYNIIRQDRVDGTNA 65

Query: 69  AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKI 128
           A        + ++             +          + I N    + +       +   
Sbjct: 66  AGGVAILVKKGISFSKLTLPRTTIEAVGIKLANQIHFIAIYNRPYYNISQRDLENLN--- 122

Query: 129 SWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN 188
                          +   +I AGD+N       C+      N                 
Sbjct: 123 --------------NIGNKVIIAGDFNATHNTRGCHRNNTSGNTIYNLSVSNNIIINHPR 168

Query: 189 MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGW 248
                    +  T                     ID I+              D +    
Sbjct: 169 SPTHFPSNNSTPTV--------------------IDLILTKNFLLEN------DPQSLSQ 202

Query: 249 TKPSDHTPVIVSL-DIP 264
              SDH PVI  + ++P
Sbjct: 203 LN-SDHNPVIFEISNLP 218


>gi|171913306|ref|ZP_02928776.1| hypothetical protein VspiD_19040 [Verrucomicrobium spinosum DSM
           4136]
          Length = 299

 Score = 49.4 bits (116), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 36/291 (12%), Positives = 70/291 (24%), Gaps = 51/291 (17%)

Query: 8   TWNV-----------NSIRARIHNLAAWIKENNPDIICLQE-TKTEDKNFPFETLQSLNY 55
           T+N+           N    R   +A+ I+ +  D++ +QE    + ++         + 
Sbjct: 24  TFNIRYDNPRDGENGNGWLQRAPVVASLIRFHRFDVLGIQEALHHQVEDLQRHLPAYAHA 83

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
                        A +   + +  +       L          +      +        +
Sbjct: 84  GCGRDDGHEAGEFAAIFYRKDVFTLKDSGTFWLSPTPELPSIGWDAKFNRICTWVKLESN 143

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
               T   ++          R    RL L +    AG    +       +          
Sbjct: 144 KTHETLYVFNTHFDHHGTTARLEGARLILAKIREIAGGRPTVLTGDFNVDQTSESYRRIH 203

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
             +      +     +     A       Y+               RIDHI  +      
Sbjct: 204 DSQFLADGFETAEERYALNGTANGFKVTAYT-------------DRRIDHIFHTRGF--K 248

Query: 236 LHSARIDTK-----------------PRGWTK-------PSDHTPVIVSLD 262
           +    + T                  PR           PSDH PV+V L+
Sbjct: 249 VLRYGVLTDSYRSPSGDAAETGSVAFPREMKFRNYLPRTPSDHFPVLVELE 299


>gi|301307682|ref|ZP_07213639.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 20_3]
 gi|300834356|gb|EFK64969.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 20_3]
          Length = 325

 Score = 49.0 bits (115), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 32/298 (10%), Positives = 74/298 (24%), Gaps = 43/298 (14%)

Query: 4   VTVATWNV-NSI----RARIHNLAAWIKENNPDIICLQETKTEDKNF----------PFE 48
           + +  WN+ N +             W+K+ +PDI C      E ++             E
Sbjct: 31  LRLLYWNIQNGMWCGQDDNYEKFTTWVKQQDPDI-C---VWCEAQSIYKNGTADPLDSQE 86

Query: 49  TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA-----TFTINT 103
                N+ +               +    +++T     +   +    E            
Sbjct: 87  RFLVDNWGVLAKRYGHPYWYIGGHRDNYPQVITSKYPIENIKKIIGEEPNQVVTHGAGWA 146

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
           + +    +           ++  +    +               + +   + I    +  
Sbjct: 147 KIIVDEKVLNIVTLHTWPQQWAFRTEDQEASKAENGGDKYRRMEIEYICKHTIGTSTNAT 206

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK------ 217
               +   D         +  +          +        Y   D  A  +        
Sbjct: 207 NEYWMMMGDFNSRNRTDNAIYRYPEDSPKFLTQDYIAQETPY--VDVIAKKYPNEFKTTT 264

Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWT-----------KPSDHTPVIVSLDIP 264
            K  RID++  +     ++  A + T                  PSDH P+I+  D+ 
Sbjct: 265 GKEARIDYVYCTQPLFDIIQYADVITDEYTKPVRDPKELSNFWWPSDHRPIIIDFDLS 322


>gi|302383396|ref|YP_003819219.1| endonuclease/exonuclease/phosphatase [Brevundimonas subvibrioides
          ATCC 15264]
 gi|302194024|gb|ADL01596.1| Endonuclease/exonuclease/phosphatase [Brevundimonas subvibrioides
          ATCC 15264]
          Length = 245

 Score = 49.0 bits (115), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 5/40 (12%)

Query: 4  VTVATWNVN---SI--RARIHNLAAWIKENNPDIICLQET 38
          + + T+NV+    +  R  +  +   I E++PDI+CLQE 
Sbjct: 1  MRLLTYNVHRCVGVDRRLDVERIVGVIAEHDPDIVCLQEL 40



 Score = 42.5 bits (98), Expect = 0.062,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 3/42 (7%)

Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
           IRIDH+ +SP     +   R    P      SDH P+IV  +
Sbjct: 203 IRIDHVFVSPHI--RVTGVRAAFSPLAR-MASDHLPLIVDFE 241


>gi|242827049|ref|XP_002488758.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
 gi|218712150|gb|EED11577.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
          Length = 951

 Score = 49.0 bits (115), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 19/56 (33%), Gaps = 3/56 (5%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278
           ID +  S    + + +       R W   +DH P++   D+   R         N 
Sbjct: 660 IDLVWASHNLANRVVNCD---TKREWWYGADHVPILTQFDLTAVRVPPMVRKQWNA 712


>gi|207723157|ref|YP_002253556.1| metal-dependent hydrolase protein [Ralstonia solanacearum MolK2]
 gi|206588351|emb|CAQ35314.1| metal-dependent hydrolase protein [Ralstonia solanacearum MolK2]
          Length = 289

 Score = 49.0 bits (115), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 35/300 (11%), Positives = 77/300 (25%), Gaps = 52/300 (17%)

Query: 1   MSVVTVATWNV------NSIRARIHNLAAWIKENNP-DIICLQETKTEDKNFP------- 46
           M  + + TWN+      +  R  +  + A      P DI+CLQE  +   + P       
Sbjct: 1   MGTI-ILTWNIQWGRGADG-RVDLPRMLAEAHAMGPFDILCLQEVTSGFGHLPGQPGDDQ 58

Query: 47  -FETLQSLNYHI----------ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFI 95
             E   +L +                +    G AI+++   + ++ H      D      
Sbjct: 59  WRELAGALGHAFTLIDGIALERHEGTRIQRFGNAIVTRLPVLHVMRHALPCPADTSPTMP 118

Query: 96  EATFT-----------INTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL 144
                           + +  L   +                +                 
Sbjct: 119 RMAIEATVQAPFGPLRVISTHLEYYSETQRIAQIDALRALHVEGWMRVAHPPTLGPEPAD 178

Query: 145 EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL 204
                 A  +  +        P              ++                  T  +
Sbjct: 179 GPFRPLAQTHATVICGDFNCKPDSTPKRLATVPFSHETATLYDAWEVAHGPAPQPPTFGV 238

Query: 205 Y--SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
           +  + W   A +         D +++S    + +    ++      T+ SDH P+++ L+
Sbjct: 239 HDRTGWTEPAYA--------CDFMLISEPLKTRVARVEVN----SVTQASDHQPMLLELN 286


>gi|153009983|ref|YP_001371198.1| endonuclease/exonuclease/phosphatase [Ochrobactrum anthropi ATCC
           49188]
 gi|151561871|gb|ABS15369.1| Endonuclease/exonuclease/phosphatase [Ochrobactrum anthropi ATCC
           49188]
          Length = 337

 Score = 49.0 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 41/270 (15%), Positives = 68/270 (25%), Gaps = 60/270 (22%)

Query: 19  HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIE 78
             +   I    PD+I                     Y   +     +  +   S    + 
Sbjct: 118 KRILQMIAREKPDVI--------------------TYEEASDQWTKWLTILQGSYPYHLN 157

Query: 79  I--VTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
                +  G  +  +  F E   T       +    +  G                R+  
Sbjct: 158 CADDPNTWGVGILSKRPFSEDAQTACVGDGLLAIAPINFGGTTVHVAALHFSWPWPRWQP 217

Query: 137 FASQRLELEEPL-----IFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191
           +  + +E E        + AGD+N  P  +              T         L  +  
Sbjct: 218 YQLRYIEPELQKLKGPLVVAGDFNAAPWSNAVRRVERASGTRHMTGIGGTWMTHLLPVKL 277

Query: 192 TDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP 251
                        Y              G+ ID I++SPE      SAR           
Sbjct: 278 A-----------PY-------------IGLPIDQILVSPEIGGAEVSAR-------EDAG 306

Query: 252 SDHTPVIVSLDIPEP--RKKQQDSTSQNMK 279
           SDH PV +   +P P    +++  T   M 
Sbjct: 307 SDHLPVRLDFSVPPPVRPDEEEPETQSVML 336


>gi|153941384|ref|YP_001390946.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum F str. Langeland]
 gi|152937280|gb|ABS42778.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum F str. Langeland]
 gi|295319008|gb|ADF99385.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum F str. 230613]
          Length = 263

 Score = 49.0 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 40/268 (14%), Positives = 79/268 (29%), Gaps = 13/268 (4%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYHI 57
           + + T N +S +      +I  LA  I ENN D+I LQE  ++ +    F+ ++  N+  
Sbjct: 1   MKILTLNCHSWQEEKQLEKIKYLAKVIYENNYDVIALQEVSQSINSKILFDNIKEDNFAF 60

Query: 58  E-TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT-INTQTLRIGNLYLPH 115
                 +          +    I      + L +  +              +  N +   
Sbjct: 61  ILIKELEKLGENRFKILWDFAHIGYDKYEEGLAILTKHPIKEKDSFYISKSKDKNFWKAR 120

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
                   Y +K   +           E +           + Q   C     + NDA  
Sbjct: 121 KIIKCKIFYKNKPILVYSCHLGWWGDKEEDFKFQANKLIEDLKQDETCILMGDFNNDAFL 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
                + +  + N  F D         +  +            K +R+D I+ +      
Sbjct: 181 ---NNKGYDYIINNNFKDIYHLAKSKDNGVTVIGDIDGWKGNTKNMRLDLILSNKNL--K 235

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +   ++          SDH  V   ++I
Sbjct: 236 VEYCKVIFNGIRKEIISDHFGVEAKIEI 263


>gi|260460592|ref|ZP_05808843.1| Endonuclease/exonuclease/phosphatase [Mesorhizobium opportunistum
           WSM2075]
 gi|259033697|gb|EEW34957.1| Endonuclease/exonuclease/phosphatase [Mesorhizobium opportunistum
           WSM2075]
          Length = 305

 Score = 49.0 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 38/311 (12%), Positives = 75/311 (24%), Gaps = 58/311 (18%)

Query: 4   VTVATWNV------NSIR---ARIHNLAAWIKENNPDIICLQET--KTEDKNFPF--ETL 50
           + + ++N+      +  R   +R   + A       DII LQE     +  NF    E L
Sbjct: 1   MKLVSYNIQYGFGSDG-RYDLSRAARIVA-----GADIIALQEVERHWQRSNFDDQPELL 54

Query: 51  QSL--NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108
             L  +YH         +                       +   +         +TLR 
Sbjct: 55  SRLLPDYHWVYGPAFDMDASERRDGRLVNRRRQFGTMVLSKLPIAWSRLHALPMRRTLRP 114

Query: 109 GNLYLPHGNPITSTK--------------------YDDKISWIKRFLRFASQRLELEEPL 148
            N        +  T                             +     +          
Sbjct: 115 LNTRNAALECMIRTPAGPLRVLSLHLAHIAAEERLEQIDYLLAQHRRAPSEGGPWSGADD 174

Query: 149 IFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL---- 204
             + ++       +     IW  D        +  + + +  +                 
Sbjct: 175 EPSRNWTSGEAEPENPLAAIWMGDFNMEPGSAEYRRIVGSTPYHRGAAYLDGFVDAAAVA 234

Query: 205 ------YSFWDYYADSWS---KNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHT 255
                 +   D++    +   K    R+DH  +       + S   D         SDH 
Sbjct: 235 SEPVLDFHTRDFHTHVKTIDGKLTNRRLDHCFVGGMFAGRVRSVGADI----GEVASDHF 290

Query: 256 PVIVSLDIPEP 266
           P+ + +D+  P
Sbjct: 291 PLRIDIDLETP 301


>gi|254447779|ref|ZP_05061244.1| endonuclease/exonuclease/phosphatase family protein [gamma
           proteobacterium HTCC5015]
 gi|198262559|gb|EDY86839.1| endonuclease/exonuclease/phosphatase family protein [gamma
           proteobacterium HTCC5015]
          Length = 246

 Score = 49.0 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 32/270 (11%), Positives = 69/270 (25%), Gaps = 34/270 (12%)

Query: 4   VTVATWN------VNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57
           + + T+N      V + R  +H++   ++  N DI+CLQE             +  ++  
Sbjct: 1   MKLITYNMHKGFGVGNRRLVLHDMREALRAANADIVCLQEL----------QGEHHHHRN 50

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
                     +  L+                         +    +    I   +  + +
Sbjct: 51  NHRHWPEEEQLEFLADSLWPHTAYGKNAVYQHGHHGNAILSRQPFSDWENINVSHRENAS 110

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
                   +     +  +      L   E        +         +         F  
Sbjct: 111 RSLLHGVIESNDGQRLHIICVHLGLFERERRRQIRQLSDR-IESHVPHHEALLIAGDFND 169

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYS---FWDYYADSWSKNKGIRIDHIMLSPEATS 234
             ++  + L+     + +   H      S   ++          +G       +S  A  
Sbjct: 170 WRQRCDRYLRQHSEVEEVFEAHLGKVAPSFPAWYPLLKVDRVYARG-------VSVNAVK 222

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
            L         + W   SDH P+ V  D P
Sbjct: 223 RLTG-------QPWRGLSDHIPLSVEFDWP 245


>gi|325856403|ref|ZP_08172119.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           denticola CRIS 18C-A]
 gi|325483587|gb|EGC86559.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           denticola CRIS 18C-A]
          Length = 291

 Score = 49.0 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 37/249 (14%), Positives = 68/249 (27%), Gaps = 18/249 (7%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQP 76
           R   L  +I    P +   QE          + L+   Y I              + +  
Sbjct: 54  RCPQLCDFINFEQPAVFGTQEVLATQLRDLLQGLEGYAY-IGVGRDDGREEGEYAAIFYR 112

Query: 77  IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
            +++  L   +  +       +   +   +RI               Y          + 
Sbjct: 113 KDLLKLLDSGNFWLSQTPERPSLGWDAACIRICTWGKFEDKTTGKQFYFFNT-----HMD 167

Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIR 196
                   E   +       + +         +  D    +    S   +    +  A +
Sbjct: 168 HVGTVARRESTRLILQRIGQLAKSQPTILTGDFNVDQTDEIYGIFSRSGILRDCYAHARQ 227

Query: 197 ATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK----PS 252
               T    ++ D+  DS S     RIDH+ +S +    +    I T      K     S
Sbjct: 228 RMAPTG---TWNDFMQDSRSN---ARIDHVFVSSDFD--IQHYAIFTNSYWLGKSRRNIS 279

Query: 253 DHTPVIVSL 261
           DH PV+V L
Sbjct: 280 DHYPVMVKL 288


>gi|304392145|ref|ZP_07374087.1| endonuclease/exonuclease/phosphatase [Ahrensia sp. R2A130]
 gi|303296374|gb|EFL90732.1| endonuclease/exonuclease/phosphatase [Ahrensia sp. R2A130]
          Length = 380

 Score = 49.0 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 44/317 (13%), Positives = 81/317 (25%), Gaps = 81/317 (25%)

Query: 25  IKENNPDIICLQETKTEDKNFPFETLQ--------SLNY--------------------- 55
           I +   DIICLQE    +     E  +         L+Y                     
Sbjct: 66  IADCRADIICLQEV---EDLATLEAFERNYLLPMTGLDYPQKEWRQGNDGRGIDVAIMAR 122

Query: 56  ---------HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
                     I +    +   +A L    P  I      D    +   +E    +  +  
Sbjct: 123 EKTADGEEIEIRSVKSHAGRTMADLEVLTPRLIELGFEKDTRLFRRDCLEVNLKVGGKHF 182

Query: 107 RIGNLYLPHG----------NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI 156
            +   +              +     +  +     +            +   +  GD N 
Sbjct: 183 TVFVAHFKSMGGPRGGLTGRDFTMPVRQAEAAGVKRIIEDRFGAERAADMRWMVCGDLND 242

Query: 157 IPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADS-- 214
                         +   +  E       L + GF   +         ++ +     S  
Sbjct: 243 YAARLAITGDKAAGHSFDWIAEETHGSAPLLDDGFAINLVDRRAQDDRWTLFYANGKSAS 302

Query: 215 ------WSKNKGIRIDHIMLSPEATSLLHSA-------------------RIDTKPR-GW 248
                       +++D+++ SP        A                    ++  PR GW
Sbjct: 303 ARLPQERPTRHLVQLDYLLASPRLAKGNAKAVPDIIRNGQPYRTVFPPDQEVERYPRTGW 362

Query: 249 TKP--SDHTPVIVSLDI 263
            +P  SDH PV+VSLD+
Sbjct: 363 DRPKASDHCPVVVSLDM 379


>gi|297678860|ref|XP_002817273.1| PREDICTED: sphingomyelin phosphodiesterase 2-like [Pongo abelii]
          Length = 423

 Score = 49.0 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 42/297 (14%), Positives = 90/297 (30%), Gaps = 37/297 (12%)

Query: 4   VTVATWNVNSI------RA-RIHNLAAWIKENNPDIICLQETKT-EDKNFPFETLQS-LN 54
           + +   N   I      RA R+  L  ++ + + D+  L+E  + +D  +  + L     
Sbjct: 9   LRIFNLNCWGIPYLSKHRADRMRRLGDFLNQESFDLALLEEVWSEQDFQYLRQKLSPTYP 68

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN---- 110
                      +G+ + SK+   E+  H+   +           F+     L + +    
Sbjct: 69  AAHHFRSGIIGSGLCVFSKHPIQELTQHIYTLNGYPYMIHHGDWFSGKAVGLLVLHLSGM 128

Query: 111 -------LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                        N         +++      +F     +  + ++  GD N+ P+   C
Sbjct: 129 VLNAYVTHLHAEYNRQKDIYLAHRVAQAWELAQFIHHTSKKADVVLLCGDLNMHPEDLGC 188

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223
                W       LE R      +                           +    G+RI
Sbjct: 189 CLLKEWTGLRDAYLETRDFQGSEEGNTMVPKNCYVSQQEL---------KLFP--FGVRI 237

Query: 224 DHIMLSPEATSLLHSARID-----TKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTS 275
           D+++     +    S +         P   T  SDH  ++ +L +     +Q  S++
Sbjct: 238 DYVLY-KAVSGFYISCKSLETTTGNDPYSGTPLSDHEALMATLFVRHSPLQQNPSST 293


>gi|168182540|ref|ZP_02617204.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum Bf]
 gi|182674371|gb|EDT86332.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum Bf]
          Length = 263

 Score = 49.0 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 41/268 (15%), Positives = 79/268 (29%), Gaps = 13/268 (4%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYHI 57
           + + T N +S +      +I  LA  I ENN D+I LQE  ++ +    F+ ++  N+  
Sbjct: 1   MKILTLNCHSWQEEKQLEKIKYLAKVIYENNYDVIALQEVSQSINSKILFDNIKEDNFAF 60

Query: 58  E-TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ-TLRIGNLYLPH 115
                 +          +    I      + L +  +              +  N +   
Sbjct: 61  ILIKELEKLGENRFKILWDFAHIGYDKYEEGLAILTKHPIKEKDAFYISKSKDKNFWKAR 120

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
                   Y +K   +           E +           + Q   C     + NDA  
Sbjct: 121 KIIKCKIFYKNKPILVYSCHLGWWDDKEEDFKFQANKLIEDLRQDEICILMGDFNNDAFL 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
                + +  L N  F D         +  +            K +R+D I+ +      
Sbjct: 181 ---NYRGYDYLINKNFKDIYHLAKSKDNGVTVIGDIDGWKGNTKDMRLDLILSNKNL--K 235

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +   ++          SDH  V   ++I
Sbjct: 236 VEYCKVIFNGIRKEIISDHFGVEAKIEI 263


>gi|307129015|ref|YP_003881031.1| Endonuclease/Exonuclease/phosphatase family protein [Dickeya
           dadantii 3937]
 gi|306526544|gb|ADM96474.1| Endonuclease/Exonuclease/phosphatase family protein [Dickeya
           dadantii 3937]
          Length = 380

 Score = 49.0 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 39/268 (14%), Positives = 78/268 (29%), Gaps = 39/268 (14%)

Query: 25  IKENNPDIICLQET------KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIE 78
           IK  N DI+C  E       +  ++    +   +    I++        VA L++++  +
Sbjct: 122 IKALNADILCAVEVENMAVLRDFNQQILADRAFAQYVMIDSPNDPRGIDVACLTRHRITQ 181

Query: 79  IVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFA 138
           + TH+       +  F           + I        + + +              R A
Sbjct: 182 LRTHIFDVSESFKPLFSRDCLE-----VTIDVGLPQPVHVLCNHFKSQNGRNDDERERAA 236

Query: 139 SQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT 198
            +R    E +        + Q +      + E+ A     +   F         D     
Sbjct: 237 KRRRAQAERVAEIVRGYNLQQEYVVVMGDLNEDVANPWHSLAPLFSVPDLHPAIDPSL-- 294

Query: 199 HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT--------------- 243
                 Y++  Y++   +  +  ++D+I +S        +  I+                
Sbjct: 295 -PETARYTY--YFSGGKAGERLNQLDYIFISTPLHQAKVTCGIERRGIYNIDKITAKEGA 351

Query: 244 -------KPRGWTKP-SDHTPVIVSLDI 263
                      W    SDH  V V LDI
Sbjct: 352 EPVTPFPTVTSWDTAASDHAAVWVELDI 379


>gi|237794947|ref|YP_002862499.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum Ba4 str. 657]
 gi|229262666|gb|ACQ53699.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum Ba4 str. 657]
          Length = 263

 Score = 49.0 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 41/268 (15%), Positives = 79/268 (29%), Gaps = 13/268 (4%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYHI 57
           + + T N +S +      +I  LA  I ENN D+I LQE  ++ +    F+ ++  N+  
Sbjct: 1   MKILTLNCHSWQEEKQLEKIKYLAKVIYENNYDVIALQEVSQSINSKILFDNIKEDNFAF 60

Query: 58  E-TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ-TLRIGNLYLPH 115
                 +          +    I      + L +  +              +  N +   
Sbjct: 61  ILIKELEKLGENRFKILWDFAHIGYDKYEEGLAILTKHPIKEKDAFYISKSKDKNFWKAR 120

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
                   Y +K   +           E +           + Q   C     + NDA  
Sbjct: 121 KIIKCKIFYKNKPILVYSCHLGWWDDKEEDFKFQANKLIEDLRQDEICILMGDFNNDAFL 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
                + +  L N  F D         +  +            K +R+D I+ +      
Sbjct: 181 ---NYRGYDYLINKNFKDIYHLAKSKDNGVTVIGDIDGWKGNTKNMRLDLILSNKNL--K 235

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +   ++          SDH  V   ++I
Sbjct: 236 VEYCKVIFNGIRKEIISDHFGVEAKIEI 263


>gi|330504967|ref|YP_004381836.1| endonuclease/exonuclease/phosphatase [Pseudomonas mendocina NK-01]
 gi|328919253|gb|AEB60084.1| endonuclease/exonuclease/phosphatase [Pseudomonas mendocina NK-01]
          Length = 363

 Score = 49.0 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 43/316 (13%), Positives = 86/316 (27%), Gaps = 59/316 (18%)

Query: 4   VTVATWNV---NSIR-----------------------ARIHNLAAWIKENNPDIICLQE 37
           + V TWNV      R                         ++ +   ++   PD++ LQE
Sbjct: 55  LKVMTWNVQYLAGKRYVFWYDLPSGDGPDERPSSEDLALTLNEVVRVLRAEQPDVVLLQE 114

Query: 38  T----KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR 93
                K  D       LQ+    +  C  +++   A    +  I     +    L     
Sbjct: 115 LHDNAKASDHQDQLALLQARLGDLYPCSSQAFYWKAGFVPHPRILGSVGMKLGTLSRFQI 174

Query: 94  FIEATFTINT------------------QTLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135
                  +                      L I               +    + ++R +
Sbjct: 175 ARAERLQLPMLEADPLSRQFQLKRALLVSYLPIRGGEELVAINTHFDAFAQGQNTMQRQV 234

Query: 136 RFASQRLEL----EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191
           +     L+      +  +  GD N++P     + P    +      E++   ++   +  
Sbjct: 235 QMTDDLLQQLQGTGKTWVLGGDLNLLPPGQFQHLPEGQRSWYAADSELQDLARRYPMIPS 294

Query: 192 TDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP 251
                   +    Y+       +   ++   +D++  SP  T L    R           
Sbjct: 295 LQQASGA-EQAQWYTHSPNDPAAHGPDRT--LDYLFYSPRLTPLASQVRQHDTL----SI 347

Query: 252 SDHTPVIVSLDIPEPR 267
           SDH PVI    +P   
Sbjct: 348 SDHLPVIGRFFLPSQE 363


>gi|240172254|ref|ZP_04750913.1| hypothetical protein MkanA1_23264 [Mycobacterium kansasii ATCC
           12478]
          Length = 260

 Score = 49.0 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 36/269 (13%), Positives = 71/269 (26%), Gaps = 27/269 (10%)

Query: 4   VTVATWNV-------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56
           + VAT+N+       + +   +  L   ++  +PD++ LQE   +        L +    
Sbjct: 1   MRVATFNILHGRTVGDGV--EVQRLCDCVRRIDPDVLALQEVDCDQPRSGRADLTAAAAE 58

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT-LRIGNLYLPH 115
                   +      +        T             + + F   +   +R+  +    
Sbjct: 59  AMGAVAHRFVAAISGTPGATWMAATGDEQPGTAAYGIALLSRFPAASWQVVRLPRIPARF 118

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
              +        +    R    A  R  L    +     + +P   + +      +D   
Sbjct: 119 PMYLPGPDKVMIVDEEPRAAVIARLRTPLGTLTVANTHLSFVPG-WNRWQLRRLAHDVRG 177

Query: 176 TLEVRQSFQKLQ-NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML-SPEAT 233
               R     L                    +F    A          +DHI+   P   
Sbjct: 178 FPWPRLLTGDLNLTPAAVRRWSRMRPLATAATF-PASAPDRQ------LDHILTDDPGLR 230

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
               SA +          SDH  ++V LD
Sbjct: 231 VGAASAELMP-------ISDHRALLVDLD 252


>gi|282877907|ref|ZP_06286716.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           buccalis ATCC 35310]
 gi|281299908|gb|EFA92268.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           buccalis ATCC 35310]
          Length = 283

 Score = 49.0 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 39/282 (13%), Positives = 77/282 (27%), Gaps = 59/282 (20%)

Query: 2   SVVTVATWNVNSIR-------------ARIHNLAAWIKENNPDIICLQE-----TKTEDK 43
           + +TV ++N   IR             A + N+A  +K+ N D++ LQE     T+  + 
Sbjct: 40  NNLTVMSYN---IRHCSPYIGSGVPSPAEVGNVAKVLKDKNADVVLLQEVDSMTTRAFNI 96

Query: 44  NFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
           +   E  +   Y      ++             +         +  +       T   + 
Sbjct: 97  DQAKELAKRAGYKYHKFFKQKDY-QGGAYGAAILSKYEMKNIINHPLPKMIDGQTIKGSN 155

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEP--LIFAGDYNIIPQPH 161
                  ++      I +       S   +      + LE      +I  GD+N  P   
Sbjct: 156 ILGSAKIVFAGKDIYIATMHLSVTESERLKQFPKYLECLEPYAHKLIIIGGDFNSRPTDA 215

Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI 221
                                               T+   + ++      +        
Sbjct: 216 SITMLEAN------------------------GFTRTNKDPNKFTIPSDKPNRE------ 245

Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            +D+I   P     + S  + T        SDH P++  L I
Sbjct: 246 -LDYIAYKPSTAVDVVSHTVFTGI----NASDHLPIVSVLKI 282


>gi|156363326|ref|XP_001625996.1| predicted protein [Nematostella vectensis]
 gi|156212855|gb|EDO33896.1| predicted protein [Nematostella vectensis]
          Length = 277

 Score = 49.0 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 36/266 (13%), Positives = 78/266 (29%), Gaps = 28/266 (10%)

Query: 4   VTVATWNV-------NSIRARIHNLAAWIKENNPDIICLQETKTE-DKNFPFETLQSLNY 55
           + +  WNV       N  +A        + + + DI+ + ET             +++ Y
Sbjct: 25  MRIGNWNVRTLYSSGNVAQAARE-----MGKRDIDIMGISETHWTGQGKMQLRDGETMVY 79

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
                         ++SK     ++   P ++  +QARF      +    +         
Sbjct: 80  SGREDNIHREGVGILMSKNAAACLIEWTPWNERMIQARFYSRHIQLTIIHIY------AP 133

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
                    D+  + ++  L   +Q   +                ++             
Sbjct: 134 TEDADEHLKDEFYTRLQEVLDSRNQHDMVIITGDMNAKVGGQNWDYERVMGKHGLGVRND 193

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
             E       L  +  T  +      H   ++     D  +KN+   IDH++++    + 
Sbjct: 194 NGERLCELCDLNELVITGTLFPHRTIHKA-TWIS--PDGKTKNQ---IDHVLVNKRFRNS 247

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
           +   R+    R     SDH  V  + 
Sbjct: 248 VKDTRVF---RSADVGSDHYLVCATY 270


>gi|323344671|ref|ZP_08084895.1| endonuclease/exonuclease/phosphatase [Prevotella oralis ATCC 33269]
 gi|323093941|gb|EFZ36518.1| endonuclease/exonuclease/phosphatase [Prevotella oralis ATCC 33269]
          Length = 305

 Score = 49.0 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 40/296 (13%), Positives = 77/296 (26%), Gaps = 62/296 (20%)

Query: 8   TWNV-----------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY- 55
           T+N+           N    R   +   +    PDI   QE K    +   + L+  NY 
Sbjct: 26  TYNIRYDNDGDKKEGNGWERRWPIICDMLNFEEPDIFGTQEAKVNQIHDLQKGLEGYNYI 85

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
            +     K     A +   +            L+      +  +      +     ++ +
Sbjct: 86  GVGRDDGKEKGEYAAIFYKKDKLTKIRSGNFWLNETPDKPKLGWDAACIRICTWGEFMDN 145

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII------PQPHDCYNPIIW 169
            + +    ++  +  I    R  S +L + +     G    +          +     I+
Sbjct: 146 KDKLKFYFFNLHMDHIGVVARRESAKLVIRKIKEITGGNAPVILTGDFNVDQNDEIFKIF 205

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
                       +  +    G  +       T                    RIDHI +S
Sbjct: 206 SASGILKDSYSAAKMRFAENGTFNDFDTELKTE------------------SRIDHIFVS 247

Query: 230 PEATSLLHSARIDTKPRGWTK------------------------PSDHTPVIVSL 261
           P+    +    + T      K                        PSDH PV+V +
Sbjct: 248 PKF--NVKRYGVLTNGYWTEKGSKENLSSNKAPKELKFKKYARRTPSDHYPVLVKI 301


>gi|302546099|ref|ZP_07298441.1| endonuclease/exonuclease/phosphatase [Streptomyces hygroscopicus
          ATCC 53653]
 gi|302463717|gb|EFL26810.1| endonuclease/exonuclease/phosphatase [Streptomyces himastatinicus
          ATCC 53653]
          Length = 257

 Score = 49.0 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 14/36 (38%), Positives = 24/36 (66%)

Query: 2  SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQE 37
          +VV V ++N+ S+R     LA  I+  +PD++C+QE
Sbjct: 15 AVVRVLSYNIRSLRDDREALARVIRACDPDVVCVQE 50


>gi|126664651|ref|ZP_01735635.1| Metal-dependent hydrolase [Marinobacter sp. ELB17]
 gi|126630977|gb|EBA01591.1| Metal-dependent hydrolase [Marinobacter sp. ELB17]
          Length = 289

 Score = 49.0 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 41/293 (13%), Positives = 84/293 (28%), Gaps = 63/293 (21%)

Query: 4   VTVATWNVN-SI-------------------RARIHNLAAWIKE--NNPDIICLQETKTE 41
           + + T+N+   I                   R+R  NL   I    +N D+I LQE   +
Sbjct: 38  LRLLTFNIQVGISTSSYRHYLTRSWQHVLPHRSRFENL-DRIATLLSNYDVIALQE--CD 94

Query: 42  DKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI 101
             +     +  + Y  E  G   +      +  Q  +    L      ++ +       I
Sbjct: 95  GGSLRSGHINQVQYLAEAAGIPYWYQQLNRNLGQFAQHSNGLLSRFRPLEVKEHRLPGLI 154

Query: 102 NTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161
             + + +     P    +    +       ++        L  +   +            
Sbjct: 155 PGRGVIVAKYGNPEDPLLLVMMHLSLSKSAQQRQLGFVSDLISDYRHVVLMGDMNAHAEQ 214

Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI 221
              N  + + D                                 SF  +  +        
Sbjct: 215 LLTNTPLKQTDLIPLPANAH------------------------SFPSWRPEKA------ 244

Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDST 274
            +DHI++SP     +HS+ + + P      SDH P+ + + +P+P      S+
Sbjct: 245 -LDHILVSPSL--QVHSSGVVSYP-----VSDHLPIALDITLPKPGATSPKSS 289


>gi|226948935|ref|YP_002804026.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum A2 str. Kyoto]
 gi|226842849|gb|ACO85515.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum A2 str. Kyoto]
          Length = 263

 Score = 49.0 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 34/274 (12%), Positives = 74/274 (27%), Gaps = 25/274 (9%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYHI 57
           + + T N +S +      +I  LA  I ENN D+I LQE  ++ +    F+ ++  N+  
Sbjct: 1   MKILTLNCHSWQEEKQLEKIKYLAKVIYENNYDVIALQEVSQSINSKILFDNIKEDNFAF 60

Query: 58  E-TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT-------QTLRIG 109
                 +          +    I      + L +  +                    +  
Sbjct: 61  ILIKELEKLGENRFKILWDFAHIGYDKYEEGLAILTKHPIKEKKSFYISKSKDKNFWKTR 120

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
            +     +   +  Y                + ++ + +    +        D  N    
Sbjct: 121 KIIKCKIDYNNNPIYFYSCHLGWWDDEEEDLKSQVNKLVQELKEKETCILMGDYNNDAFL 180

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
            N     L  ++           D           +             K +R+D I+ +
Sbjct: 181 NNKGYDYLINKKLKDIYHLARSKDNGVTAIGDIDGW---------KGNTKDMRLDLILSN 231

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                 +   ++          SDH  V   ++I
Sbjct: 232 KNL--KVEYCKVIFNGIRKEIISDHFGVEAKIEI 263


>gi|160884067|ref|ZP_02065070.1| hypothetical protein BACOVA_02043 [Bacteroides ovatus ATCC 8483]
 gi|299144720|ref|ZP_07037788.1| putative secreted protein [Bacteroides sp. 3_1_23]
 gi|156110409|gb|EDO12154.1| hypothetical protein BACOVA_02043 [Bacteroides ovatus ATCC 8483]
 gi|298515211|gb|EFI39092.1| putative secreted protein [Bacteroides sp. 3_1_23]
          Length = 260

 Score = 49.0 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 39/271 (14%), Positives = 73/271 (26%), Gaps = 56/271 (20%)

Query: 4   VTVATWNVNSIR----ARIHNLAAWIKENNPDIICLQET------KTEDKNFPFETLQSL 53
           V V T+N   +R    A +  LA  IK   PD + LQE       K        + +  L
Sbjct: 24  VRVMTYN---LRFGELASLEELAHHIKSFKPDFVALQEVDSKTDRKRTPHQKGKDFISEL 80

Query: 54  NYH--IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
            YH  +     K+ +          +    ++    + +     E       + L     
Sbjct: 81  AYHTGMFGLYGKTIDYSTGYYGIGMLSKYPYISVQKIMLPHPVKEHERRAMLEGL-FEMG 139

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
                   T    + + +  ++           + P+I  GD+N             W  
Sbjct: 140 NDTIVFTSTHLDVNSQETRAEQIKFITGHFKNYKYPVILGGDFNARHYSEAIRGMDSWFA 199

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
            +     +      ++                                   ID++   P+
Sbjct: 200 ASNDDFGMPAWKPVIK-----------------------------------IDYLFAYPQ 224

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
               + S +           SDH P+I  L+
Sbjct: 225 KGWRVISTQTVQSLL-----SDHLPIITELE 250


>gi|149198151|ref|ZP_01875198.1| hypothetical protein LNTAR_15857 [Lentisphaera araneosa HTCC2155]
 gi|149138753|gb|EDM27159.1| hypothetical protein LNTAR_15857 [Lentisphaera araneosa HTCC2155]
          Length = 336

 Score = 49.0 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 39/280 (13%), Positives = 79/280 (28%), Gaps = 42/280 (15%)

Query: 22  AAWIKENNPDIICLQET---KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIE 78
           A  I + + DI+ L E     + D+       + ++Y  ++  +   +   +    +   
Sbjct: 60  ANVIAQIDADIVLLSELGHGDSLDELLKDLAERQVHYTFKSIVEGPDSLRRLCILAKFPP 119

Query: 79  IVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG-----------NPITSTKYDDK 127
           +                          +                      P+  T     
Sbjct: 120 VKVDHRTRVKFKLKSEEVFVSRGFAYCIFEWQNSYKLHFIGAHLKSKIPTPLGQTDMRRY 179

Query: 128 ISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQ 187
            +    +L     + E E  +I AGD N                 A      ++ +    
Sbjct: 180 EARQLHYLVDEILKKEPEANIIVAGDMNDTFDSSPIKEIQYRRYKA-----EKRLYDLRP 234

Query: 188 NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH-SARIDTKPR 246
                 +    +D    YS               RID+   S    S ++    +     
Sbjct: 235 YDKSHASWTHYYDKSDEYS---------------RIDYFFSSYAMLSEINYDTLVIPHSP 279

Query: 247 GWTKPSDHTPVIVSLDIPEPRKKQ------QDSTSQNMKP 280
            W   SDH P+++S   PE +  +      +++T +N+KP
Sbjct: 280 HWFIASDHRPMLLSFT-PENKDPKPALKLFENATRKNIKP 318


>gi|21218691|ref|NP_624470.1| secreted protein [Streptomyces coelicolor A3(2)]
 gi|5708245|emb|CAB52358.1| putative secreted protein [Streptomyces coelicolor A3(2)]
          Length = 279

 Score = 49.0 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 78/259 (30%), Gaps = 60/259 (23%)

Query: 18  IHNLAAWIKENNPDIICLQET------KTEDKNFPFETLQSLNYHIET------------ 59
           +  +A  I+++  D++ LQE       +++  + P E  + L YH+              
Sbjct: 58  LRRVANVIRKSGADVVGLQEVDKHYSARSDWADQPAELAELLGYHVVFGANIDNSPPAPG 117

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +  Y    +          T L       Q   + AT  ++ + +   N +L  G+  
Sbjct: 118 GHRVQYGTAILSRYPITASDNTWLYKSPGQEQRGLLHATLDVHGKKVEFYNTHLAAGSQA 177

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +                  +   +P I  GD+N +P   +         DA      
Sbjct: 178 DRLQQ----------TAQVVDLIGTRKPGILVGDFNALPAAPESRPLQNAYTDA------ 221

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
               + L   G      A   T                    RID I  +   T L+  A
Sbjct: 222 --WAKSLHARGDGATYPAQSPTE-------------------RIDLIYATRRVTPLV--A 258

Query: 240 RIDTKPRGWTKPSDHTPVI 258
           ++          SDH P++
Sbjct: 259 QVLKD---DPAASDHRPLL 274


>gi|229820664|ref|YP_002882190.1| Endonuclease/exonuclease/phosphatase [Beutenbergia cavernae DSM
           12333]
 gi|229566577|gb|ACQ80428.1| Endonuclease/exonuclease/phosphatase [Beutenbergia cavernae DSM
           12333]
          Length = 269

 Score = 49.0 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 36/237 (15%), Positives = 60/237 (25%), Gaps = 18/237 (7%)

Query: 30  PDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSK--YQPIEIVTHLPGDD 87
           PD++ LQE   +             Y     G+              +         G  
Sbjct: 44  PDVVGLQEV--QSHQLADLRADLPEYEAVGVGRDDGAAGGEHVPLLVRRAAWRIAEWGTF 101

Query: 88  LDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEP 147
              +   + + F   T         L   +           +         +Q   L   
Sbjct: 102 WLSETPAVPSRFAGTTFPRTCTWAVLEPVDGAGRAGSIGVWNVHLDHESTDAQAFGLRVV 161

Query: 148 LIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF 207
           L    +   +P             D                +        T  T    +F
Sbjct: 162 LDAVRERGDVPAVVL--------GDLNAGPRTEPLAVVAGALHDARTRSRTAPTGPGGTF 213

Query: 208 WDYYADSWSKNKG---IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
            D+  D+ +   G    RIDH+++S     + +       P     PSDH PV+V L
Sbjct: 214 HDWVPDAVADTAGDDDSRIDHVLVSDAVGVVAYDVP---VPGPGVVPSDHLPVVVDL 267


>gi|221042584|dbj|BAH12969.1| unnamed protein product [Homo sapiens]
          Length = 375

 Score = 49.0 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 5/63 (7%)

Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73
          R  N+   IK  + D++CLQE   ++ ++  E    L+SL YH E   +           
Sbjct: 31 RFPNILKEIKHFDADVLCLQEV--QEDHYGAEIRPSLESLGYHCEYKMRTGRKPDGCAIC 88

Query: 74 YQP 76
          ++ 
Sbjct: 89 FKH 91


>gi|21218370|gb|AAM44053.1|AF510741_1 unknown [Homo sapiens]
 gi|55665689|emb|CAH71919.1| angel homolog 2 (Drosophila) [Homo sapiens]
 gi|119613774|gb|EAW93368.1| angel homolog 2 (Drosophila), isoform CRA_d [Homo sapiens]
 gi|119613775|gb|EAW93369.1| angel homolog 2 (Drosophila), isoform CRA_d [Homo sapiens]
          Length = 375

 Score = 49.0 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 5/63 (7%)

Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73
          R  N+   IK  + D++CLQE   ++ ++  E    L+SL YH E   +           
Sbjct: 31 RFPNILKEIKHFDADVLCLQEV--QEDHYGAEIRPSLESLGYHCEYKMRTGRKPDGCAIC 88

Query: 74 YQP 76
          ++ 
Sbjct: 89 FKH 91


>gi|134300632|ref|YP_001114128.1| endonuclease/exonuclease/phosphatase [Desulfotomaculum reducens
           MI-1]
 gi|134053332|gb|ABO51303.1| Endonuclease/exonuclease/phosphatase [Desulfotomaculum reducens
           MI-1]
          Length = 244

 Score = 49.0 bits (115), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 44/273 (16%), Positives = 77/273 (28%), Gaps = 59/273 (21%)

Query: 1   MSVVTVATWNVNSIRAR--------IHNLAAWIKENNPDIICLQETKTEDKNFPFETL-- 50
           MS + V ++N   IR          I  +AA +      +I LQE    DK+ P      
Sbjct: 1   MSQIKVVSYN---IRHAQGMDGTIHIQRIAASLAHTKAQLIGLQEV---DKHMPRSHFIH 54

Query: 51  --QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108
             ++L   +        N    +++Y    +                     +    L++
Sbjct: 55  QAKTLGQLLNMHWVYGPNLDWGVAQYGNAILSYWPVLLYRQYMLPSKGEQRGLLEAVLQL 114

Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168
            +  +           +++ + +K  L    +        I  GD+N  P   +      
Sbjct: 115 KHSKVSFFCTHLGLNQEERAAQVKEILNIIKKCCYP---CILVGDFNDGPTSKEHRLLTT 171

Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
              DA                G      +                         ID+I +
Sbjct: 172 ILKDAVGI------------QGSIKTFPSHKPQEQ-------------------IDYIFV 200

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           SPE         I +     T  SDH PV ++L
Sbjct: 201 SPEWK-------ILSASTYTTLASDHLPVQITL 226


>gi|326565908|gb|EGE16069.1| endonuclease/exonuclease/phosphatase [Moraxella catarrhalis
           103P14B1]
 gi|326571929|gb|EGE21934.1| endonuclease/exonuclease/phosphatase [Moraxella catarrhalis BC8]
 gi|326577941|gb|EGE27805.1| endonuclease/exonuclease/phosphatase [Moraxella catarrhalis O35E]
          Length = 249

 Score = 49.0 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 36/270 (13%), Positives = 70/270 (25%), Gaps = 39/270 (14%)

Query: 1   MSVVTVATWNV-------NSIRARIHNLAAWIKENNPDIICLQETKTEDKN--FPFETLQ 51
           M  +T+ ++N+       N +  R+  +   + + NPDI+CLQE + ++      F    
Sbjct: 1   MKSITITSYNIHKGMSPTNRL-VRLMGMKDALLKTNPDILCLQEVQGQNLKRTIDFTEFP 59

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
               H                         +   +        +          L I   
Sbjct: 60  DGGQHEWFGEFLGIAS----------SYGKNAEYEHGHHGNAVLSRHPLDPKHNLNITVN 109

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
            L     +    + D        L      L  +    +    + I       +      
Sbjct: 110 RLEKRGVLHCEVHPDGWRRPVVVLCCHLNLLHRDRIKQYQAIRDYIFTLPADASL----- 164

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY--SFWDYYADSWSKNKGIRIDHIMLS 229
                     S +  Q +            H  Y  +F             + +D I + 
Sbjct: 165 -ILAGDFNDWSKKSCQALSSLGLSEVFLQVHGEYPATFPAKMPV-------LSLDRIYV- 215

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
                 +H+A +      W+  SDH P+  
Sbjct: 216 RRL--KVHNAMVHGGV-PWSNLSDHLPISA 242


>gi|308448585|ref|XP_003087692.1| hypothetical protein CRE_26029 [Caenorhabditis remanei]
 gi|308253595|gb|EFO97547.1| hypothetical protein CRE_26029 [Caenorhabditis remanei]
          Length = 740

 Score = 49.0 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 37/286 (12%), Positives = 80/286 (27%), Gaps = 37/286 (12%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENN---PDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           + + T+N  S+ A  + LA  ++E N    DII L ETK                     
Sbjct: 21  LRICTFNCRSV-ATDNRLAELLEETNRIKYDIIGLSETK----------------RSAEV 63

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
              + +G  ++   +    V+   G  ++           I +  +    L +       
Sbjct: 64  HMTNRDGTGVILGKRNDSSVSGGVGFIINKSLMPKIKEIKIVSHRIGYITLQVNKNQCTI 123

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
              Y     + +       + L  +        Y ++    +        N+        
Sbjct: 124 IQGYAPTADYEEEEHSNFYENL-EDVYKSCKSRYKMVIGDFNARIGERKGNEVFIGPHSM 182

Query: 181 QSFQKLQN----MGFTDAIRATHDTHHLYSF--WDYYADSWSKNKGIRIDHIMLSPEATS 234
           +               + +   +      +   W Y +          +DHI+ +     
Sbjct: 183 EKRNDSGERLATFCEVNRVFHMNSQFIKATHRRWTYISPDKQHRHE--LDHILANG---K 237

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
            +    +      +T  SDH  +   + I   + K +    +  KP
Sbjct: 238 YITDVSV---VPSFTNGSDHRMLRAKIHINAKQAKYEQV--KRRKP 278


>gi|218658684|ref|ZP_03514614.1| putative metal-dependent hydrolase protein [Rhizobium etli IE4771]
          Length = 216

 Score = 49.0 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 34/251 (13%), Positives = 64/251 (25%), Gaps = 47/251 (18%)

Query: 20  NLAAWIKENNPDIICLQETKT---------EDKNFPFETLQSLNYHIETCGQKSYNGVAI 70
            +A+ I E   DII LQE            +            ++H      +   G AI
Sbjct: 1   RIASVIAEAGADIIALQEVDVLRRRTGGVDQAHLIASLLKMQAHFHPALSVAEEQYGDAI 60

Query: 71  LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISW 130
           ++      +         + +          + + L +       G          +   
Sbjct: 61  ITALPTAAVKAGPLPSIGEQRGALSVEVLVGDRKLLVVNTHLGLRGRDR------IRQMT 114

Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG 190
                 +     +   P I  GD+N IP             DA    +            
Sbjct: 115 TLLNSGWLRGTKDEPLPCILCGDFNAIPSSATYRLATRSLKDALLGGKAAP--------- 165

Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
                 + +                     +R+DHI ++ +    +  A +    R    
Sbjct: 166 -RATFPSRYPL-------------------MRLDHIFVTDDLV--VKRATVLQN-RLTRV 202

Query: 251 PSDHTPVIVSL 261
            SDH P+   +
Sbjct: 203 ASDHLPLFAEI 213


>gi|281339730|gb|EFB15314.1| hypothetical protein PANDA_021504 [Ailuropoda melanoleuca]
          Length = 126

 Score = 49.0 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 36/104 (34%), Gaps = 12/104 (11%)

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
           E R     L  +   D  R  H     YSF+     ++S     RIDH +      S   
Sbjct: 20  ETRALNAILDELDLIDIYRTLHPRTKEYSFYSNAHGTFS-----RIDHALGHKTGLSQYQ 74

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
              I          SDH  + + L+     K  ++S +  ++ I
Sbjct: 75  KIEIIPCI-----FSDHNALKLELN--HKEKPGRNSNTWRLRTI 111


>gi|239831464|ref|ZP_04679793.1| endonuclease/exonuclease/phosphatase [Ochrobactrum intermedium LMG
           3301]
 gi|239823731|gb|EEQ95299.1| endonuclease/exonuclease/phosphatase [Ochrobactrum intermedium LMG
           3301]
          Length = 341

 Score = 49.0 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 39/265 (14%), Positives = 69/265 (26%), Gaps = 50/265 (18%)

Query: 19  HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIE 78
             +   I    PD+I                     Y   +     +  +   S    + 
Sbjct: 122 KRILQMIAREKPDVI--------------------TYEEASDQWSKWLTILQGSYPYHLN 161

Query: 79  I--VTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
                +  G  +  +  F E   T       +    +  G                R+  
Sbjct: 162 CADDPNTWGVGILSKRPFSEEAQTACVGDGLLAIAPINFGGTTVHVAAIHFSWPWPRWQP 221

Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIR 196
              + +E E   +        P            ++A   +E     + L  +G T    
Sbjct: 222 HQLRYIEPELQKL------NGPMIIAGDFNAAPWSNAVRRVEYASGTRHLTGIGGTWMTH 275

Query: 197 ATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTP 256
               +   Y              G+ ID I++SPE      S+R           SDH P
Sbjct: 276 LLPVSLSPY-------------IGLPIDQILVSPEIGGARVSSR-------EDAGSDHLP 315

Query: 257 VIVSLDIPEP--RKKQQDSTSQNMK 279
           V +   +P P    +++  T   M 
Sbjct: 316 VRLDFSVPPPVRPDEEEPETQSVML 340


>gi|28704050|gb|AAH47469.1| ANGEL2 protein [Homo sapiens]
          Length = 286

 Score = 49.0 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 5/63 (7%)

Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73
          R  N+   IK  + D++CLQE   ++ ++  E    L+SL YH E   +           
Sbjct: 31 RFPNILKEIKHFDADVLCLQEV--QEDHYGAEIRPSLESLGYHCEYKMRTGRKPDGCAIC 88

Query: 74 YQP 76
          ++ 
Sbjct: 89 FKH 91


>gi|34392575|dbj|BAC82619.1| pol-like protein [Danio rerio]
          Length = 1197

 Score = 49.0 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 34/258 (13%), Positives = 75/258 (29%), Gaps = 34/258 (13%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIK-ENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           M+ + + + NV  + +++      I      D+IC+QET                ++   
Sbjct: 1   MNNLCLVSINVRGLSSKVK-FENVIALTKKCDVICIQET---------------GWNENI 44

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPG-DDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
                      +           +       +   F         + L I  +       
Sbjct: 45  VNDLKKCWDGEILYNNDPNKKKGMAILIRRGIGYTFDVLFKDNYGRILTIKIMNKDEEIR 104

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
           I +    ++      F +  S  +     +I  GD+N + +  D  + +++  D      
Sbjct: 105 ICNIHAPNEDLERVTFFKDLSVLMSGWNNVIVLGDFNTVLERIDVDDHMVFRADVGRRE- 163

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN--KGIRIDHIMLSPEATSLL 236
                  ++   + D  R  +     YS        W     K  R+D+++ +    S +
Sbjct: 164 ---LKHMIEKHKYVDVWRERNRAKREYS-----RRQWVNTVLKQSRLDYVLCTRNVESFI 215

Query: 237 HSARIDTKPRGWTKPSDH 254
            +             SDH
Sbjct: 216 SNIF-----YKIFSCSDH 228


>gi|254420344|ref|ZP_05034068.1| endonuclease/exonuclease/phosphatase family [Brevundimonas sp.
           BAL3]
 gi|196186521|gb|EDX81497.1| endonuclease/exonuclease/phosphatase family [Brevundimonas sp.
           BAL3]
          Length = 245

 Score = 49.0 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 3/48 (6%)

Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268
           IRIDH  +SPE    +   + D  P      SDH P+I+  +I +P +
Sbjct: 201 IRIDHCFVSPEI--RITGVKADFSPLARV-ASDHLPLIIDFEIVQPSR 245



 Score = 38.6 bits (88), Expect = 0.89,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 5/39 (12%)

Query: 5  TVATWNVN---SI--RARIHNLAAWIKENNPDIICLQET 38
           + T+NV+       R  +  + A I E+  DI+CLQE 
Sbjct: 3  RLLTYNVHRCVGTDKRLDVDRIVAVIGEHEADIVCLQEL 41


>gi|172060778|ref|YP_001808430.1| endonuclease/exonuclease/phosphatase [Burkholderia ambifaria
           MC40-6]
 gi|171993295|gb|ACB64214.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria
           MC40-6]
          Length = 284

 Score = 49.0 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 17/39 (43%), Gaps = 4/39 (10%)

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
           D + ++      +    ID   R     SDH PV++ +D
Sbjct: 250 DFVFVTDTLLPRVTRCEIDGDVR----ASDHQPVVLEVD 284


>gi|302547749|ref|ZP_07300091.1| putative secreted protein [Streptomyces hygroscopicus ATCC 53653]
 gi|302465367|gb|EFL28460.1| putative secreted protein [Streptomyces himastatinicus ATCC 53653]
          Length = 182

 Score = 49.0 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 19/44 (43%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 220 GIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           G RID I+ SP        A IDT   G   PSDH PV   L++
Sbjct: 141 GDRIDWILTSPGV--RTRYAAIDTYSSGGQFPSDHLPVHAVLEL 182


>gi|124359529|gb|ABD32574.2| Endonuclease/exonuclease/phosphatase [Medicago truncatula]
          Length = 521

 Score = 49.0 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 32/270 (11%), Positives = 68/270 (25%), Gaps = 68/270 (25%)

Query: 4   VTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           + + ++NV  +     RA + N    I+E NP ++CLQE+K                 + 
Sbjct: 1   MKILSYNVRGLGSFEKRAEVRNF---IREKNPFVVCLQESKLS---------------MV 42

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
                +     +  +Y     +    G         +E   TI  + + I  + +   + 
Sbjct: 43  DDYIINSIWGNVGCEYSYQASIGASGGLLTVWNPLLVEVWCTITFRYVLIIKVKVLSTDQ 102

Query: 119 ITSTKYDDKISWIKRFLRFASQ-----RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
                                +         +  +   GD+N +    +     +     
Sbjct: 103 DFIIANVYAPCDTLAKQDLWVRLSQFLTANGDVNVCVCGDFNYVRSEEERRGRNVVFRQV 162

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHL-YSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                         N     +           +++  Y  D                   
Sbjct: 163 D---------ADNFNNFIDISFLIDLPICGRLFTW--YRGDGEQ---------------- 195

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
                              SDH P+++S+D
Sbjct: 196 ------------VAYQRGLSDHVPLVLSVD 213


>gi|77461149|ref|YP_350656.1| endonuclease/exonuclease/phosphatase [Pseudomonas fluorescens
           Pf0-1]
 gi|77385152|gb|ABA76665.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1]
          Length = 375

 Score = 49.0 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 44/309 (14%), Positives = 82/309 (26%), Gaps = 53/309 (17%)

Query: 4   VTVATWNV---NSIRAR---------------------IHNLAAWIKENNPDIICLQET- 38
           + V TWNV      R                       +  +A  I++  PD++ LQE  
Sbjct: 70  LKVMTWNVQYLAGKRYVFWNDLAQGDDEAPTPEDMAFSLDEVARVIRDEQPDVVLLQELD 129

Query: 39  ---KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFI 95
              K  D     + LQ     +  C   +++  A       I          L       
Sbjct: 130 DGAKASDYQNQLKLLQERLTDLYPCSAHAFDWKADFVPDPHIFGSVGRQLATLSRYRIEH 189

Query: 96  EATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWI---KRFLRFASQRLELEEPLIFAG 152
                +  Q     +      + + +T                   + + +         
Sbjct: 190 AERLQLPVQPANFISRQFQPKDALLATTLPLSDGGQLVVFNTHLDRATQPDDTLQAQVTA 249

Query: 153 DYNIIPQPHDCYNPIIWENDACFTL---------EVRQSFQKLQNMGFTDAIRATHDTHH 203
              ++ +      P +   D              E R  +     +           T++
Sbjct: 250 VAKVLDKHESHGTPWLIGGDFNLLPLGQYRRLPTEQRTPYSADSALHVLWDKYPMIPTNN 309

Query: 204 LYSFWDYYAD---SWSKNKGI----R-IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHT 255
             S  D  A     +  + G+    R +D++  SP+       A +        + SDH 
Sbjct: 310 EASGID-RAKWLTHYPNDPGLNGPDRTVDYLFYSPKIKR--VEATVRQD--DTLRISDHL 364

Query: 256 PVIVSLDIP 264
           PVI    +P
Sbjct: 365 PVIAKFLLP 373


>gi|89072797|ref|ZP_01159354.1| hypothetical protein SKA34_04820 [Photobacterium sp. SKA34]
 gi|89051319|gb|EAR56774.1| hypothetical protein SKA34_04820 [Photobacterium sp. SKA34]
          Length = 647

 Score = 49.0 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 45/295 (15%), Positives = 85/295 (28%), Gaps = 44/295 (14%)

Query: 2   SVVTVATWNVNSI-----RARIHN----LAAWIKENNPDIICLQETKTEDKNFPFETLQS 52
           + +T+  +N+  I      A        +A  I+    D+  L E +   K       + 
Sbjct: 360 NSLTLMEFNIWGIDDRGTNAAPKYGSKYVAEVIENAGADVAVLTEGRLNAK----AVAEE 415

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           L ++       S     ++S+++   I T              +      +  +   +  
Sbjct: 416 LGWYYVEHDDFSKYAPGVVSRFKIESIDT--TNSRTLSLKLHDKNFNRHYSLGVIHPSSS 473

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFAS---------------QRLELEEPLIFAGDYNII 157
             + +   +                                    + +   +  GD+N +
Sbjct: 474 ANYNSWDAAVTQAFNNELWTNIQNEEKESKLKVLNVVVDKLFINKDDKTSDLIVGDFNTV 533

Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL---YSF-WDYYAD 213
                  +            +   S + + +M F D+ R  H        Y++ W Y   
Sbjct: 534 MSGEFIKDSEFETIRTYAGQKFLMSSKLMDDMDFKDSYREVHPNVKEIPGYTYSWFYQQ- 592

Query: 214 SWSKNKGIRIDHIML--SPEATSLLH---SARIDTKPRGWTKPSDHTPVIVSLDI 263
              K KG RIDHIM   +      L    S      P  W   SDH+ V+    I
Sbjct: 593 --DKQKGGRIDHIMYRNNKNLKYKLKPINSYVTHYHPVTWV--SDHSAVVTKFKI 643


>gi|145297705|ref|YP_001140546.1| phospholipase C precursor [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|142850477|gb|ABO88798.1| putative phospholipase C precursor [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 438

 Score = 49.0 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 43/280 (15%), Positives = 85/280 (30%), Gaps = 43/280 (15%)

Query: 2   SVVTVATWNVN-------SIRARIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSL 53
           S + VA++NV        SI  R+  L  ++K  +   + LQE      + F     +  
Sbjct: 172 SKLKVASYNVWALPVIASSIGERLTLLPDYLKGYDA--LLLQEVFDGRREGFLQALAKEY 229

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
            Y  +   +   N       +    ++        + Q  + + T T       +    +
Sbjct: 230 PYQTKVLDKPGVN------IHDGGVVIVSRYPIVREAQLVYPQCTGTDCFADKGVMYAEV 283

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
             G       +    +          ++++  +    A    I       Y      N  
Sbjct: 284 IKGG-KAWHLFATHTASFDTDEARQLRQIQFGQIRTLAASLKIPASDTVIYGGDFNVNKR 342

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYS--FWDYYADSWS-------KNKGIRID 224
            F  +                + A    +  Y+   +D   + ++        N    +D
Sbjct: 343 KFADDY---------ASMLANLDAHEPGYGGYTEATFDPRINPYAGGPLSGGANVEY-LD 392

Query: 225 HIMLSPE---ATSLLHSARIDTKPRGWTKP----SDHTPV 257
           ++++S E   A+  L+S  I     G   P    SDH PV
Sbjct: 393 YLVVSREYGAASHNLNSVWIPRSSDGSLWPASNLSDHFPV 432


>gi|257458794|ref|ZP_05623917.1| putative endonuclease/exonuclease/phosphatase [Campylobacter
           gracilis RM3268]
 gi|257443782|gb|EEV18902.1| putative endonuclease/exonuclease/phosphatase [Campylobacter
           gracilis RM3268]
          Length = 453

 Score = 49.0 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 38/283 (13%), Positives = 74/283 (26%), Gaps = 65/283 (22%)

Query: 4   VTVATWNV----NSIR---------------------ARIHNLAAWIKENNPDIICLQET 38
           + +A++NV    + +                       ++  +A  I   N DI+ LQE 
Sbjct: 20  LKIASFNVQNLFDGVNDGTEYADFEIGRGGWSEQKYERKLQEIADEISALNADILGLQEI 79

Query: 39  KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT 98
             E++       Q   Y      +       +    +                   + A 
Sbjct: 80  --ENEAVLKALAQKAGYKFYAFSRAQTAPAGVAVMSRIPIKFQKTYRPTELKTRDILRAD 137

Query: 99  FTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP 158
           F +         +++       S          KR   F  + L+  +  I AGD+N   
Sbjct: 138 FALGGTDFSFYVVHMLSARNPLS--------ERKRNFAFLREVLQGHQRAIVAGDFNT-- 187

Query: 159 QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN 218
              +     +                   +         +H+                  
Sbjct: 188 ---NFGRNSLLNELIERDGFSDLWALHPCSQLKHFGSCESHE------------------ 226

Query: 219 KGIRIDHIMLSPEATSL----LHSARIDTKPRGWTKPSDHTPV 257
            G  +DHI+LS +  S        + +       +  SDH P+
Sbjct: 227 SGAVLDHILLSDDFFSNEPGYKKDSFV---VAKSSTASDHFPI 266


>gi|225458669|ref|XP_002282902.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 695

 Score = 49.0 bits (115), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 28/251 (11%), Positives = 65/251 (25%), Gaps = 31/251 (12%)

Query: 11  VNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAI 70
           VN  R R   + + +++   D+ C+QETK +                       +  V  
Sbjct: 99  VNESRKR-KVIKSVVRKQKVDLFCIQETKIQ---------------------LMFESVVR 136

Query: 71  LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISW 130
                       L                 +      +G   L +             + 
Sbjct: 137 SLGSGRFLEWKALNACGSTGGMLICWDKRVLELLEWEVGQFSLSYRFKTLENGVIWAFTG 196

Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG 190
           +        +    E+     G +         +N  + + +      +  + ++   + 
Sbjct: 197 VYGPFTRLEREGLWEKVGAIRGIWEGPWCLGGDFNITLAQGERNRQGRITSAMRRFAEVV 256

Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
               +         +++        +     R+D  ++SP               R   +
Sbjct: 257 DDLGLVDIQLHGGAFTW----TGGLNNMSRARLDRFLVSPCWLDQFSRV----CQRRLPR 308

Query: 251 P-SDHTPVIVS 260
           P SDH PV++ 
Sbjct: 309 PISDHFPVLLE 319


>gi|158297124|ref|XP_001689028.1| AGAP008053-PA [Anopheles gambiae str. PEST]
 gi|157015043|gb|EDO63591.1| AGAP008053-PA [Anopheles gambiae str. PEST]
          Length = 404

 Score = 48.6 bits (114), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 38/273 (13%), Positives = 81/273 (29%), Gaps = 18/273 (6%)

Query: 4   VTVATWNVNSI------R-ARIHNLAAWIKENNPDIICLQETKT-EDKNFPFETLQS-LN 54
           +++ T N+  I      R  R+  +   +   N DI+ LQE  +  D  +  + +++ L 
Sbjct: 3   LSILTLNIWGIPYVSKDRETRVKAIGDVLASGNYDIVSLQEVWSDSDYQYLKQRVENVLP 62

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL-RIGNLYL 113
           +          +G+AILS+Y  +    H    +  +        F      + +I     
Sbjct: 63  FCHYFYSGVVGSGLAILSRYPIVAAFFHAWSVNGYIHRIQHGDWFGGKGVGMAKISVNDQ 122

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
                +     +              Q  +  + +      +++       N    +   
Sbjct: 123 LVHVYVAHLHAEYNRQCDDYMAHRVIQAHDTAQFIESTRGQSVLQVLAGDLNTEPGDLAY 182

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM--LSPE 231
              +   +             +       + Y+       +     G RID+I+  +   
Sbjct: 183 RVLVTSSKLKDSYDRKSIGSGVGTNECHTNSYT---DPLAAKQLPNGKRIDYILYRIGDH 239

Query: 232 ATSLLHSARI---DTKPRGWTKPSDHTPVIVSL 261
               L   R+   +  P      SDH  V   L
Sbjct: 240 YEGRLLEHRLPLPERVPGQTFSYSDHEAVYAKL 272


>gi|125536384|gb|EAY82872.1| hypothetical protein OsI_38085 [Oryza sativa Indica Group]
          Length = 498

 Score = 48.6 bits (114), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 39/294 (13%), Positives = 78/294 (26%), Gaps = 52/294 (17%)

Query: 2   SVVTVATWNVNS------IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55
               + T+NV         R R+  L   IK +NPD+IC QE                 Y
Sbjct: 227 KTFKIMTYNVWFHEDLELCR-RMDALGDLIKNHNPDLICFQEV------------TPNIY 273

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
            +             LS    ++   +           F    F+ +     +   ++  
Sbjct: 274 LLLQKSDWWQEYRCSLSNSMAMQRKYYCMQMSKLPVESFDCTPFSNSIMGRELCVAHVKT 333

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP-IIWENDAC 174
           G  +        +           Q    E          I+    +      +  +D  
Sbjct: 334 GGAVKLVLATSHLESPMPGPPTWDQMYSTERVAQANKSLKILGSFRNVIFCGDMNWDDKG 393

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI--RIDHIMLSPEA 232
                  +       G+TDA          +++        S N+ +  R+D  +   + 
Sbjct: 394 DGPFPLPA-------GWTDAWIELKPGEDGWTYDTKANSMLSANRKLQKRLDRFVC--KL 444

Query: 233 TS------------------LLHSARIDTKPRGWT---KPSDHTPVIVSLDIPE 265
                                +   ++  + R       PSDH  +++S+ +  
Sbjct: 445 ADFKINSIQMIGKNAIPGLSYVKEKKVRKEVRKLELPVLPSDHFGLVLSITLES 498


>gi|77555100|gb|ABA97896.1| Endonuclease/Exonuclease/phosphatase family protein, expressed
           [Oryza sativa Japonica Group]
          Length = 498

 Score = 48.6 bits (114), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 39/294 (13%), Positives = 78/294 (26%), Gaps = 52/294 (17%)

Query: 2   SVVTVATWNVNS------IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55
               + T+NV         R R+  L   IK +NPD+IC QE                 Y
Sbjct: 227 KTFKIMTYNVWFHEDLELCR-RMDALGDLIKNHNPDLICFQEV------------TPNIY 273

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
            +             LS    ++   +           F    F+ +     +   ++  
Sbjct: 274 LLLQKSDWWQEYRCSLSNSMAMQRKYYCMQMSKLPVESFDCTPFSNSIMGRELCVAHVKT 333

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP-IIWENDAC 174
           G  +        +           Q    E          I+    +      +  +D  
Sbjct: 334 GGAVKLVLATSHLESPMPGPPTWDQMYSTERVAQANKSLKILGSFRNVIFCGDMNWDDKG 393

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI--RIDHIMLSPEA 232
                  +       G+TDA          +++        S N+ +  R+D  +   + 
Sbjct: 394 DGPFPLPA-------GWTDAWIELKPGEDGWTYDTKANSMLSANRKLQKRLDRFVC--KL 444

Query: 233 TS------------------LLHSARIDTKPRGWT---KPSDHTPVIVSLDIPE 265
                                +   ++  + R       PSDH  +++S+ +  
Sbjct: 445 ADFKINNIQMIGKNAIPGLSYVKEKKVRKEVRKLELPVLPSDHFGLVLSITLES 498


>gi|260061391|ref|YP_003194471.1| hypothetical protein RB2501_07320 [Robiginitalea biformata
           HTCC2501]
 gi|88785523|gb|EAR16692.1| hypothetical protein RB2501_07320 [Robiginitalea biformata
           HTCC2501]
          Length = 255

 Score = 48.6 bits (114), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 45/280 (16%), Positives = 78/280 (27%), Gaps = 46/280 (16%)

Query: 7   ATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57
            ++N+         +S   R   L A I  + PD++  QE            +    Y  
Sbjct: 1   MSYNIRYDNPGDGRDSWDQRKEFLIAQIAYHAPDVVGTQE--GLLHQLRDMEVALEGYAF 58

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL-------RIGN 110
              G+   +     +          L  ++    +   E         L       R  +
Sbjct: 59  FGKGRDQGDDQGEHTAVFYNTGQLELLEEETFWLSETPEVPSKGWDAALNRVCTYGRFRH 118

Query: 111 LYLPHGNPITSTKYDDKISWIKRFL-----RFASQRLELEEPLIFAGDYNIIPQPHDCYN 165
                   + +T +D      +R       R  ++      P++  GD N+ P       
Sbjct: 119 RPSGREFYLFNTHFDHVGEAARRESVSLILRQMARVNAAGLPVVLMGDLNLEPDSAPIRQ 178

Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225
                +DA      +         G  +    T                       RID+
Sbjct: 179 LANSMDDA----FDQAGQAAYGPPGTFNGFDCTQPVT------------------RRIDY 216

Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           I   P     + S  I ++  G   PSDH PV+  L+  E
Sbjct: 217 IFTGPGDF-TVRSHAILSEFTGLGFPSDHFPVLARLEFSE 255


>gi|83858654|ref|ZP_00952176.1| hypothetical protein OA2633_04106 [Oceanicaulis alexandrii
           HTCC2633]
 gi|83853477|gb|EAP91329.1| hypothetical protein OA2633_04106 [Oceanicaulis alexandrii
           HTCC2633]
          Length = 324

 Score = 48.6 bits (114), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 27/255 (10%), Positives = 59/255 (23%), Gaps = 51/255 (20%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + ++N+ ++        A+++E + D++ LQE     +  P    ++  Y        
Sbjct: 113 LRLISFNMWNLNRDPDAAIAFLREGDFDVVFLQEVGGALRGVPASLQETYPYQQRCRWGA 172

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +      L +           G D                  LR+ + +          +
Sbjct: 173 AVISRLPLLE----------RGCDPYETVPVAFIEIEFQGAPLRLTSTHFARPTRPDLYQ 222

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           Y  +             ++   +       + +              +        R   
Sbjct: 223 YHREQLGELITDHAHQSQILAGDFNTAENGFQMRLLADALAPLERITHGLRTWPSERVLP 282

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             +                                    IDHI +S    +    A    
Sbjct: 283 LPVIG----------------------------------IDHIWVSEGLCASYTGA---- 304

Query: 244 KPRGWTKPSDHTPVI 258
                   SDH PV 
Sbjct: 305 ---AADAGSDHRPVF 316


>gi|322505842|emb|CBZ14872.1| endonuclease/exonuclease protein-like protein [Leishmania
           braziliensis MHOM/BR/75/M2904]
          Length = 745

 Score = 48.6 bits (114), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 9/37 (24%), Positives = 17/37 (45%)

Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
               Y+ WD   +   +N+G RID+I++       + 
Sbjct: 484 CPCPYTCWDQSRNRRLENEGTRIDYILVDSALLPAVV 520



 Score = 47.1 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 7/43 (16%)

Query: 4  VTVATWNVNS-------IRARIHNLAAWIKENNPDIICLQETK 39
          + + +WNV         IR    ++  +      DIICLQE K
Sbjct: 1  MFLISWNVAGWSSTSQAIRESFGSIHDFFACTEADIICLQECK 43


>gi|237717287|ref|ZP_04547768.1| metallophosphoesterase [Bacteroides sp. D1]
 gi|237719038|ref|ZP_04549519.1| metallophosphoesterase [Bacteroides sp. 2_2_4]
 gi|262406053|ref|ZP_06082603.1| metallophosphoesterase [Bacteroides sp. 2_1_22]
 gi|293371916|ref|ZP_06618320.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           ovatus SD CMC 3f]
 gi|294648117|ref|ZP_06725660.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           ovatus SD CC 2a]
 gi|294806860|ref|ZP_06765685.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           xylanisolvens SD CC 1b]
 gi|298480123|ref|ZP_06998322.1| secreted protein [Bacteroides sp. D22]
 gi|229443270|gb|EEO49061.1| metallophosphoesterase [Bacteroides sp. D1]
 gi|229451816|gb|EEO57607.1| metallophosphoesterase [Bacteroides sp. 2_2_4]
 gi|262356928|gb|EEZ06018.1| metallophosphoesterase [Bacteroides sp. 2_1_22]
 gi|292633162|gb|EFF51739.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           ovatus SD CMC 3f]
 gi|292636501|gb|EFF54976.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           ovatus SD CC 2a]
 gi|294445889|gb|EFG14531.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           xylanisolvens SD CC 1b]
 gi|295085514|emb|CBK67037.1| Metal-dependent hydrolase [Bacteroides xylanisolvens XB1A]
 gi|298273932|gb|EFI15494.1| secreted protein [Bacteroides sp. D22]
          Length = 263

 Score = 48.6 bits (114), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 39/271 (14%), Positives = 73/271 (26%), Gaps = 56/271 (20%)

Query: 4   VTVATWNVNSIR----ARIHNLAAWIKENNPDIICLQET------KTEDKNFPFETLQSL 53
           V V T+N   +R    A +  LA  IK   PD + LQE       K        + +  L
Sbjct: 27  VRVMTYN---LRFGELASLEELAHHIKSFKPDFVALQEVDSKTDRKRTPHQKGKDFISEL 83

Query: 54  NYH--IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
            YH  +     K+ +          +    ++    + +     E       + L     
Sbjct: 84  AYHTGMFGLYGKTIDYSTGYYGIGMLSKYPYISVQKIMLPHPVKEHERRAMLEGL-FEMG 142

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
                   T    + + +  ++           + P+I  GD+N             W  
Sbjct: 143 NDTIVFTSTHLDVNSQETRAEQIKFITGHFKNYKYPVILGGDFNARHYSEAIRGMDSWFA 202

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
            +     +      ++                                   ID++   P+
Sbjct: 203 ASNDDFGMPAWKPVIK-----------------------------------IDYLFAYPQ 227

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
               + S +           SDH P+I  L+
Sbjct: 228 KGWRVISTQTVQSLL-----SDHLPIITELE 253


>gi|51092216|gb|AAT94521.1| GH03334p [Drosophila melanogaster]
          Length = 526

 Score = 48.6 bits (114), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 38/270 (14%), Positives = 78/270 (28%), Gaps = 32/270 (11%)

Query: 25  IKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETCGQKSYNGVAILSKYQPIEIVTH 82
           I +N PD+ICLQE   +   F    L S NY              +   +      I   
Sbjct: 235 ILQNQPDVICLQEV--DHFKFLQTVLGSQNYAGIFFPKPDSPCLYIEQNNGPDGCAIFYK 292

Query: 83  LPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK------------YDDKISW 130
                L      I   + + +  + I        +                       + 
Sbjct: 293 RDKLQLQGYDTRILEVWRVQSNQVAIAARLRMRSSGREFCVATTHLKARHGALLAKLRNE 352

Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE----NDACFTLEVRQSFQKL 186
             R L    ++   + PL+  GD+N  P        +  +      A   +++ +     
Sbjct: 353 QGRDLIRFVKQFAGDTPLLLCGDFNAEPVEPIYATILGCDLLRLGSAYADVKLDREEILH 412

Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR 246
            N    + +  +      Y+ W    +    +    ID++  +P+    + +        
Sbjct: 413 PNADVGEFVAKSMKREPPYTTWKIREEGEECHT---IDYVFYTPD-RLKIKNCLYFPAGE 468

Query: 247 --------GWTKPSDHTPVIVSLDIPEPRK 268
                    +  PSDH  ++   ++  P +
Sbjct: 469 QIGKNRTPSFQYPSDHFSLVCDFELLPPTE 498


>gi|313205315|ref|YP_004043972.1| endonuclease/exonuclease/phosphatase [Paludibacter propionicigenes
           WB4]
 gi|312444631|gb|ADQ80987.1| Endonuclease/exonuclease/phosphatase [Paludibacter propionicigenes
           WB4]
          Length = 369

 Score = 48.6 bits (114), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 29/251 (11%), Positives = 57/251 (22%), Gaps = 16/251 (6%)

Query: 19  HNLAAWIKENNPDIICLQE--TKTEDKNFPFE----TLQSLNYHIETCGQKSYNGVAILS 72
           + +  +  ++N DIICLQE      ++    E          Y      QK+     + +
Sbjct: 126 NKVIQYAIDSNADIICLQEFTVSGSNEYLTMEDINKAFAKYPYKHIQFRQKNSKENGVAT 185

Query: 73  KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIK 132
             +   +               +            I N    +           K+    
Sbjct: 186 FSKFPIVSKQKINYPSAYNNSILSDININGKIVRVINNHLESNRLTEYDKAMPAKLKNNW 245

Query: 133 RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192
              +           L  A     +                    +              
Sbjct: 246 DTNKLTRVTRHFTNKLGSAFKIRAVQADTVAGVIANSPYKVIVCGDFNDVPSSYTYTKVK 305

Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPS 252
            +++           W +      +    RID++   P       +  I          S
Sbjct: 306 GSLKDAFAETGTGLGWTFN----ERYYHFRIDYVFFDP------TAYSIIDYKTDKVNYS 355

Query: 253 DHTPVIVSLDI 263
           DH PV+  + I
Sbjct: 356 DHYPVLCQIKI 366


>gi|297539130|ref|YP_003674899.1| Endonuclease/exonuclease/phosphatase [Methylotenera sp. 301]
 gi|297258477|gb|ADI30322.1| Endonuclease/exonuclease/phosphatase [Methylotenera sp. 301]
          Length = 250

 Score = 48.6 bits (114), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 42/282 (14%), Positives = 83/282 (29%), Gaps = 59/282 (20%)

Query: 2   SVVTVATWNVN-SI---RAR--IHNLAAWIKENNPDIICLQE-----TKTED-------- 42
           + + +AT+N++       AR  +H     +++   D+I LQE     TK  +        
Sbjct: 3   NTLRIATFNIHKGFTHFNARFSLHLQRDMLRKLQADVIFLQEVQDVHTKHTERFASMSTS 62

Query: 43  ---KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF 99
              +    E     +Y   +     ++G A+LSK+  I+            Q   +    
Sbjct: 63  GQMEFLADEVWSDYSYGKNSVYPAGHHGNAVLSKFPIIKTNNQDISAHATEQRGMLHCEI 122

Query: 100 TINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159
            I T    +  + +  G      +       +     +  Q +    PLI AGD+N    
Sbjct: 123 NIPTWDEPLHAVCVHLGLFAQWRRQQ-----LVSVSEYIEQHIPANAPLIIAGDFND--- 174

Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK 219
                   +                +        +  A                      
Sbjct: 175 ------WGMRTGRIFAERLNMHEVFEHHAGKPAKSFPAWLPM------------------ 210

Query: 220 GIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
            +R+D I +       +    + +    + K SDH  +  +L
Sbjct: 211 -LRLDRIYVRGF---NVKHVEVHSGA-HFLKVSDHAILTATL 247


>gi|300311792|ref|YP_003775884.1| metal-dependent hydrolase [Herbaspirillum seropedicae SmR1]
 gi|300074577|gb|ADJ63976.1| metal-dependent hydrolase protein [Herbaspirillum seropedicae SmR1]
          Length = 260

 Score = 48.6 bits (114), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 45/264 (17%), Positives = 81/264 (30%), Gaps = 47/264 (17%)

Query: 4   VTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           +TVAT+N++       R     +AA + E   D++ LQE               L     
Sbjct: 36  LTVATYNIHGAVGTDGRFAPERVAAVLDELQADVVALQEV-------------PLG---- 78

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
                  + V +L+  +    +    G  ++  AR            L   ++ L  G+ 
Sbjct: 79  -----GADQVDVLALLRAHTGMFAAEGPTMESPARRYGNAVLSRYPILATESIDLSFGSR 133

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
                 D  I    + LR  +  L L+     A    ++        P+I   D      
Sbjct: 134 EPRGALDADIDCRGQLLRVVATHLGLKPAERRAQIKRLLQAFDTNDAPVILLGDV----- 188

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLY-SFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
             + F   + + +             + S W  +A          +D I +SP     L 
Sbjct: 189 -NEWFMWGRTLRWLVGHFEAAPAPPTFPSRWPVFA----------LDRIWISPR--RRLQ 235

Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261
              +          SDH P++  +
Sbjct: 236 HLAVHRSALARV-ASDHLPLLAHI 258


>gi|170595251|ref|XP_001902307.1| Endonuclease/Exonuclease/phosphatase family protein [Brugia malayi]
 gi|158590094|gb|EDP28850.1| Endonuclease/Exonuclease/phosphatase family protein [Brugia malayi]
          Length = 391

 Score = 48.6 bits (114), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 39/290 (13%), Positives = 76/290 (26%), Gaps = 29/290 (10%)

Query: 3   VVTVATWNVNSI------RA-----RIHNLAAWIKENNPDIICLQETKTEDK--NFPFET 49
           ++ V + N  ++      R+     RI  +   + +N  DI+ L+E   E          
Sbjct: 4   ILRVVSLNCWALPLPWPFRSSDHALRIKKIGEALLQNEYDIVALEEVWGEGDFLRLQKAL 63

Query: 50  LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT---QTL 106
                Y        + +G+ + S++  +  + H    +           F         +
Sbjct: 64  KDVYAYSYYFHSGFTGSGICVFSRHPIVSTLMHRFTLNGFAHHIHRGDWFGGKGVGLVEI 123

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
            I    +         +YD             +  L             +I        P
Sbjct: 124 EIEQYRINFYAAHLHAEYDPNKDLYLPHRLAQAFELAQFVKHTSYSADALILAGDFNIEP 183

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK---GIRI 223
                         +     +     D         + Y+          KNK   G R+
Sbjct: 184 DNLAYQLIMKNANLRDAWIQKPNSCDDCGATFGRLDNCYT------PQRLKNKKCYGKRL 237

Query: 224 DHIML-SPEATSLLHSARIDTKPRGWTK---PSDHTPVIVSLDIPEPRKK 269
           D+IM  S ++   L    I        K    SDH  +     + +   +
Sbjct: 238 DYIMYRSGKSKIELKLCEIRMNRIHDQKSINYSDHVGIYAEFSVSDQYDE 287


>gi|311746546|ref|ZP_07720331.1| endonuclease/exonuclease/phosphatase family protein [Algoriphagus
           sp. PR1]
 gi|311302536|gb|EAZ79778.2| endonuclease/exonuclease/phosphatase family protein [Algoriphagus
           sp. PR1]
          Length = 348

 Score = 48.6 bits (114), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 37/250 (14%), Positives = 69/250 (27%), Gaps = 22/250 (8%)

Query: 19  HNLAAWIKENNPDIICLQE-----TKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSK 73
            N+  W++++  DI   QE     T T   +      + + +       +       L  
Sbjct: 110 PNVYTWLQDHPADIKVFQEFYQDFTTTSRNSI-KLLGEDMGFESSYQVIEGNPQKRSLGL 168

Query: 74  YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKR 133
               +      G   D           I      I        +    ++  + I  +K 
Sbjct: 169 AIFSKYSIIQEGKVFDKNGTNGAIFADILVNQDTIRIYNAHLESMRIDSEGLENIEGVKE 228

Query: 134 FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTD 193
             R    +L             ++    +  +PII   D          F+  +N+   +
Sbjct: 229 NYRQTLGKLHRGSLERSKQLSLLVEHIQNSPHPIILMGDLNEVPYSYTYFKLSENL---E 285

Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253
                      +++       +     +RIDHI  SP+         I  K       SD
Sbjct: 286 NAFELMGRGFGFTY--NRILIF-----LRIDHIFASPQLKP------IQFKTHREVDYSD 332

Query: 254 HTPVIVSLDI 263
           H PV  +   
Sbjct: 333 HYPVSATFTW 342


>gi|154277306|ref|XP_001539494.1| predicted protein [Ajellomyces capsulatus NAm1]
 gi|150413079|gb|EDN08462.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 1321

 Score = 48.6 bits (114), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 28/75 (37%), Gaps = 8/75 (10%)

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           + W           G  ID   LSP     L    I  +     K SDH P+  +L++  
Sbjct: 430 TTWQDRGSP-----GTTIDLTFLSPLLHDKLRRCAIAEEA---CKGSDHKPIETTLELTP 481

Query: 266 PRKKQQDSTSQNMKP 280
             K+ +    +N +P
Sbjct: 482 IPKEAERRNWKNTEP 496


>gi|260903873|ref|ZP_05912195.1| hypothetical protein BlinB_00970 [Brevibacterium linens BL2]
          Length = 255

 Score = 48.6 bits (114), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 44/276 (15%), Positives = 74/276 (26%), Gaps = 40/276 (14%)

Query: 1   MSVVTVATWNVNSIR----------ARIHNLAAWIKENNPDIICLQETKTEDKNFPFET- 49
           MS  ++ T+N   +R           R+   A  I +  P II  QE   E         
Sbjct: 1   MSDFSIMTFN---LRYPALDGHPVATRLPIAAELITQARPHIIGTQE--GELDQLENLIS 55

Query: 50  LQSLNYHI----ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT 105
           L    Y       + G        I    +       +       +    E+    + +T
Sbjct: 56  LLPKEYVWLGEGHSGGNSGEFTAVIYDSSRFDVDRVDISWLSEQPETVASESWGVSHART 115

Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165
           L + +                     +     + + +                      +
Sbjct: 116 LTVVDFRDLVTKQPLRLLNTHLDHRSEEARLESGKIMADHLAEAAGPCVVTGDFNVATGS 175

Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225
           P+         L    +    +N+G               +F  Y      K+   RID 
Sbjct: 176 PVYNYFCTELGLTDTGAAVPGENIG---------------TFHRYKG---PKDGDPRIDW 217

Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           I+ + +      S RI+T   G   PSDH PV   L
Sbjct: 218 ILTTSDL--QTVSTRINTFSAGGEYPSDHFPVEAVL 251


>gi|254418698|ref|ZP_05032422.1| endonuclease/exonuclease/phosphatase family [Brevundimonas sp.
           BAL3]
 gi|196184875|gb|EDX79851.1| endonuclease/exonuclease/phosphatase family [Brevundimonas sp.
           BAL3]
          Length = 298

 Score = 48.6 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/275 (12%), Positives = 70/275 (25%), Gaps = 36/275 (13%)

Query: 2   SVVTVATWNVNSIR-----------ARIHNLAAWIKENNPDIICLQETKTE-----DKNF 45
             V + ++N   IR            R  ++A  I   +PD++ +QE             
Sbjct: 38  RSVRLMSYN---IRYDAPDDTPNWLQRRPHMARQIAFFDPDVLGVQEALIPMVAYLADQA 94

Query: 46  PFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT 105
           P           +   Q          + +   + T                   +    
Sbjct: 95  P--AYDHYGVGRDDGAQAGETTTLFWRRARFEAVSTQTLWCSPTPDRPSKGWDAALPRTV 152

Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165
            R+       G  +                + A+   +L    +      ++        
Sbjct: 153 TRVVLRDRASGRLLDVRNAHMDHVGAVAREQCAALAADLAPATVEGATAAVV-------- 204

Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225
                 D     +     + L          +        ++ D +  +   + G+ IDH
Sbjct: 205 ---LMGDFNAGPDTAPYRRVLAAGLRDARAVSPVVFGPAGTYND-FDIARDND-GVAIDH 259

Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
           + ++P     +    + T        SDH PV+V 
Sbjct: 260 VFVAPGL--SVERYGVPTDSFSGQVISDHFPVVVD 292


>gi|115647238|ref|XP_001180799.1| PREDICTED: similar to bcnt, partial [Strongylocentrotus purpuratus]
          Length = 434

 Score = 48.6 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/277 (13%), Positives = 81/277 (29%), Gaps = 34/277 (12%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSY 65
           + TWNV ++           ++   DI+  Q           E  +       +      
Sbjct: 1   IGTWNVRTLN----------QDGKLDILMSQ----------LEKFKGYKVLCASEEDVHR 40

Query: 66  NGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYD 125
            GVA++   Q  + +                 T       +++    +     +  T YD
Sbjct: 41  RGVALILNKQAQKALLGY-NTISPRLISARFQTQVGALTIIQVYAPNMADREEMIDTFYD 99

Query: 126 DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQK 185
                I          ++ +       D++                +     E   +F  
Sbjct: 100 QLQQTIDDTPNKDILIVQGDLIAKVGRDWDT----WKNVIGHHGYGEMNNRGEKLLNFCM 155

Query: 186 LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKP 245
             N+   + +    +    +++     D  +KNK   ID +M++ +  S +         
Sbjct: 156 ANNLAIANTMFKQKNASREWTWES--PDGRTKNK---IDFVMVNNKWKSSVQ-CG--RSF 207

Query: 246 RGWTKPSDHTPVIVSLDIPEPRKKQQDS-TSQNMKPI 281
                 SDH  VI +  +    K +Q++      +P+
Sbjct: 208 PSADVASDHQLVICNFKLRFKTKPKQNAIIGGKFRPL 244


>gi|294055186|ref|YP_003548844.1| Endonuclease/exonuclease/phosphatase [Coraliomargarita akajimensis
           DSM 45221]
 gi|293614519|gb|ADE54674.1| Endonuclease/exonuclease/phosphatase [Coraliomargarita akajimensis
           DSM 45221]
          Length = 261

 Score = 48.6 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 41/288 (14%), Positives = 77/288 (26%), Gaps = 62/288 (21%)

Query: 4   VTVATWNVN---------SI-RAR-----IHNLAAWIKENNPDIICLQETKTEDK----- 43
           +   T N+           + RA      +  +   ++   PD++ +QE           
Sbjct: 6   LRFLTLNIAHGRGLSLYQGLHRASTIERNLQRIVRLLEREQPDVVAMQEVDGSSHWNKHI 65

Query: 44  NFPFETLQSLNYHIETCGQKSY--------NGVAILSKYQPIEIVTHLPGDDLDVQARFI 95
           N      +   Y     G  +          G A+LS+Y      T   G     +  F+
Sbjct: 66  NLLEFLAREAGYAYHHLGVHNRRLGKLPLAYGNALLSRYPIENPDTQAFGSAELGEKGFL 125

Query: 96  EATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYN 155
            +   +    L + NL+L   +        +++                    I  GD+N
Sbjct: 126 YSELRLPAGHLPVVNLHLDFRSRQRRLDQVERLIGYLEARHREKGGETY-FSPIICGDFN 184

Query: 156 IIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW 215
                                LE   ++Q L + G      +                  
Sbjct: 185 SSATKQRDAV-----KHLIGYLEGHCAYQLLPSGG--KTFPSILPMQS------------ 225

Query: 216 SKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                  +D I + P     +    +          SDH PV+  L++
Sbjct: 226 -------LDFIFVPPS--HEVRRCEVLKS-----YVSDHRPVVADLEL 259


>gi|218662414|ref|ZP_03518344.1| putative endonuclease/exonuclease/phosphatase family protein
           [Rhizobium etli IE4771]
          Length = 357

 Score = 48.6 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 35/80 (43%), Gaps = 22/80 (27%)

Query: 207 FWDYYADSWSKNKGIRIDHIMLSPEATSL--------LHSA-----------RIDTKPR- 246
           +  Y+     +    ++D+I LSP   +         + +             ++  PR 
Sbjct: 278 WTLYHTRGPQEQHLCQLDYIWLSPALAAHNSGRLPEIIRNGQPFRTVFPPGQEVERYPRT 337

Query: 247 GWTKP--SDHTPVIVSLDIP 264
           GW +P  SDH PV+++LD+P
Sbjct: 338 GWDRPKASDHCPVVMTLDLP 357


>gi|85000047|ref|XP_954742.1| endonuclease [Theileria annulata strain Ankara]
 gi|65302888|emb|CAI75266.1| endonuclease, putative [Theileria annulata]
          Length = 586

 Score = 48.6 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 46/323 (14%), Positives = 91/323 (28%), Gaps = 79/323 (24%)

Query: 5   TVATWNVNSI------RARIHNLAAWIKENNPDIICLQETK------------------- 39
           T+ TWNV+ +      +    +    +K+++PDI+ LQ+ K                   
Sbjct: 276 TILTWNVSGLALSKSKKTIWESFLQILKQHDPDIVVLQDVKLCSSEILGKQPKLSARTYG 335

Query: 40  ----------TEDKNFPFET----LQSLN-YHIETCGQKSYNGVAILSKYQPIEIVTHLP 84
                      +D +   E      +     H  +  + +   V +  +++ +++  +L 
Sbjct: 336 GHVSPSYAQEVQDADLVNELKRTTFKKYYLVHSLSAWRIAGQLVFVKKEFECLKMRYNLN 395

Query: 85  GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL 144
                           +   +  + +L  P    I  +      S   R L       + 
Sbjct: 396 IKANAKYHHPEGRCIILQFNSFYLISLLSPVQGWINRSV--RIRSRWDRELATFLNNSKS 453

Query: 145 EEPLIFAGDYNIIPQPHD--------------CYNPIIWENDACFTLEVRQSFQKLQNMG 190
           E+  I  G  N  PQ  D               +            ++       L    
Sbjct: 454 EKATIITGCLNCAPQDIDLSDPERLKQEKSIVLHKQEELGFPGSRDVDREGFKWLLDAGN 513

Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNK------GIRIDHIMLSPEATSLLHSARI--- 241
             D  R  H             +   KN        +R + +++S      +    I   
Sbjct: 514 MVDVFRVKHPYDG--------TEKTEKNINDKTRCAVRTNLVLMSKNFLRNVKFCEIIGN 565

Query: 242 --DTKPRGWTKPSDHTPVIVSLD 262
             D  P GW     H P ++ L+
Sbjct: 566 VNDLNPSGWR----HLPQLLRLE 584


>gi|315223109|ref|ZP_07864977.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           anginosus F0211]
 gi|315187798|gb|EFU21545.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           anginosus F0211]
          Length = 271

 Score = 48.6 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/253 (11%), Positives = 62/253 (24%), Gaps = 15/253 (5%)

Query: 18  IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPI 77
           +  LA  I +   D+ICLQE     +    + +Q+  YH        +         + +
Sbjct: 21  LDQLAERILQEKYDVICLQEV--NQEMESEQVVQAPFYHAVDGAIAIHKDHFAHCLVERL 78

Query: 78  E----IVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKR 133
                I       +     RF E    ++   L+   L +   N  T       +     
Sbjct: 79  VEKGLIYHWSWAYNHIGFDRFHEGVAILSLNPLKPRELLVSDANDPTDYHTRKVLLAETE 138

Query: 134 FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTD 193
                           +   +       +                      +        
Sbjct: 139 VDGRLVTVASCHLSW-WNKGFQEEWAQIEEELLQCNMPLVLMGDFNNPVGYEGYQHILRS 197

Query: 194 AIRATHDTHHLYSFWDYYA-----DSWSKNK-GIRIDHIMLSPEATSLLHSARIDTKPRG 247
            +          +             W+ NK  ++ID+I  S +    +  + +    + 
Sbjct: 198 PLALQDSHAVAATVVGTATVEGDIAGWAGNKEALKIDYIFTSKDF--NIEKSAVVFDGKA 255

Query: 248 WTKPSDHTPVIVS 260
               SDH  +   
Sbjct: 256 TPVVSDHFGLEAE 268


>gi|224177590|gb|ACN38810.1| MIP06315p [Drosophila melanogaster]
          Length = 441

 Score = 48.6 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/270 (14%), Positives = 80/270 (29%), Gaps = 32/270 (11%)

Query: 25  IKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETCGQKSYNGVAILSKYQPIEIVTH 82
           I +N PD+ICLQE   +   F    L S NY              +   +      I   
Sbjct: 150 ILQNQPDVICLQEV--DHFKFLQTVLGSQNYAGIFFPKPDSPCLYIEQNNGPDGCAIFYK 207

Query: 83  LPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK------------YDDKISW 130
                L      I   + + +  + I        +                       + 
Sbjct: 208 RDKLQLQGYDTRILEVWRVQSNQVAIAARLRMRSSGREFCVATTHLKARHGALLAKLRNE 267

Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE----NDACFTLEVRQSFQKL 186
             R L    ++   + PL+  GD+N  P        +  +      A   +++ +     
Sbjct: 268 QGRDLIRFVKQFAGDTPLLLCGDFNAEPVEPIYATILGCDLLRLGSAYADVKLDREEILH 327

Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA------- 239
            N    + +  +      Y+ W    +    +    ID++  +P+    + +        
Sbjct: 328 PNADVGEFVAKSMKREPPYTTWKIREEGEECHT---IDYVFYTPD-RLKIKNCLDFPAGE 383

Query: 240 RIDTKPR-GWTKPSDHTPVIVSLDIPEPRK 268
           +I       +  PSDH  ++   ++  P +
Sbjct: 384 QIGKNRTPSFQYPSDHFSLVCDFELLPPTE 413


>gi|161078191|ref|NP_001097746.1| curled, isoform D [Drosophila melanogaster]
 gi|158030219|gb|ABW08640.1| curled, isoform D [Drosophila melanogaster]
          Length = 642

 Score = 48.6 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/270 (14%), Positives = 80/270 (29%), Gaps = 32/270 (11%)

Query: 25  IKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETCGQKSYNGVAILSKYQPIEIVTH 82
           I +N PD+ICLQE   +   F    L S NY              +   +      I   
Sbjct: 351 ILQNQPDVICLQEV--DHFKFLQTVLGSQNYAGIFFPKPDSPCLYIEQNNGPDGCAIFYK 408

Query: 83  LPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK------------YDDKISW 130
                L      I   + + +  + I        +                       + 
Sbjct: 409 RDKLQLQGYDTRILEVWRVQSNQVAIAARLRMRSSGREFCVATTHLKARHGALLAKLRNE 468

Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE----NDACFTLEVRQSFQKL 186
             R L    ++   + PL+  GD+N  P        +  +      A   +++ +     
Sbjct: 469 QGRDLIRFVKQFAGDTPLLLCGDFNAEPVEPIYATILGCDLLRLGSAYADVKLDREEILH 528

Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA------- 239
            N    + +  +      Y+ W    +    +    ID++  +P+    + +        
Sbjct: 529 PNADVGEFVAKSMKREPPYTTWKIREEGEECHT---IDYVFYTPD-RLKIKNCLDFPAGE 584

Query: 240 RIDTKPR-GWTKPSDHTPVIVSLDIPEPRK 268
           +I       +  PSDH  ++   ++  P +
Sbjct: 585 QIGKNRTPSFQYPSDHFSLVCDFELLPPTE 614


>gi|161078189|ref|NP_001097745.1| curled, isoform C [Drosophila melanogaster]
 gi|21654879|gb|AAK85704.1| nocturin [Drosophila melanogaster]
 gi|158030218|gb|ABW08639.1| curled, isoform C [Drosophila melanogaster]
          Length = 449

 Score = 48.6 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/270 (14%), Positives = 80/270 (29%), Gaps = 32/270 (11%)

Query: 25  IKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETCGQKSYNGVAILSKYQPIEIVTH 82
           I +N PD+ICLQE   +   F    L S NY              +   +      I   
Sbjct: 158 ILQNQPDVICLQEV--DHFKFLQTVLGSQNYAGIFFPKPDSPCLYIEQNNGPDGCAIFYK 215

Query: 83  LPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK------------YDDKISW 130
                L      I   + + +  + I        +                       + 
Sbjct: 216 RDKLQLQGYDTRILEVWRVQSNQVAIAARLRMRSSGREFCVATTHLKARHGALLAKLRNE 275

Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE----NDACFTLEVRQSFQKL 186
             R L    ++   + PL+  GD+N  P        +  +      A   +++ +     
Sbjct: 276 QGRDLIRFVKQFAGDTPLLLCGDFNAEPVEPIYATILGCDLLRLGSAYADVKLDREEILH 335

Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA------- 239
            N    + +  +      Y+ W    +    +    ID++  +P+    + +        
Sbjct: 336 PNADVGEFVAKSMKREPPYTTWKIREEGEECHT---IDYVFYTPD-RLKIKNCLDFPAGE 391

Query: 240 RIDTKPR-GWTKPSDHTPVIVSLDIPEPRK 268
           +I       +  PSDH  ++   ++  P +
Sbjct: 392 QIGKNRTPSFQYPSDHFSLVCDFELLPPTE 421


>gi|161078193|ref|NP_001097747.1| curled, isoform E [Drosophila melanogaster]
 gi|73853348|gb|AAZ86746.1| RE65127p [Drosophila melanogaster]
 gi|108383940|gb|ABF85759.1| IP15605p [Drosophila melanogaster]
 gi|158030220|gb|ABW08641.1| curled, isoform E [Drosophila melanogaster]
          Length = 446

 Score = 48.6 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/270 (14%), Positives = 80/270 (29%), Gaps = 32/270 (11%)

Query: 25  IKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETCGQKSYNGVAILSKYQPIEIVTH 82
           I +N PD+ICLQE   +   F    L S NY              +   +      I   
Sbjct: 155 ILQNQPDVICLQEV--DHFKFLQTVLGSQNYAGIFFPKPDSPCLYIEQNNGPDGCAIFYK 212

Query: 83  LPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK------------YDDKISW 130
                L      I   + + +  + I        +                       + 
Sbjct: 213 RDKLQLQGYDTRILEVWRVQSNQVAIAARLRMRSSGREFCVATTHLKARHGALLAKLRNE 272

Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE----NDACFTLEVRQSFQKL 186
             R L    ++   + PL+  GD+N  P        +  +      A   +++ +     
Sbjct: 273 QGRDLIRFVKQFAGDTPLLLCGDFNAEPVEPIYATILGCDLLRLGSAYADVKLDREEILH 332

Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA------- 239
            N    + +  +      Y+ W    +    +    ID++  +P+    + +        
Sbjct: 333 PNADVGEFVAKSMKREPPYTTWKIREEGEECHT---IDYVFYTPD-RLKIKNCLDFPAGE 388

Query: 240 RIDTKPR-GWTKPSDHTPVIVSLDIPEPRK 268
           +I       +  PSDH  ++   ++  P +
Sbjct: 389 QIGKNRTPSFQYPSDHFSLVCDFELLPPTE 418


>gi|268592513|ref|ZP_06126734.1| endonuclease/exonuclease/phosphatase family protein [Providencia
           rettgeri DSM 1131]
 gi|291311920|gb|EFE52373.1| endonuclease/exonuclease/phosphatase family protein [Providencia
           rettgeri DSM 1131]
          Length = 297

 Score = 48.6 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 45/280 (16%), Positives = 77/280 (27%), Gaps = 48/280 (17%)

Query: 4   VTVATWNV--NSIR---ARIHNLAAWIKENNPDIICLQET--------KTED-KNFPFET 49
           + VAT+N+  N +    + +  L   I + + D+I L E         K    +      
Sbjct: 47  IKVATYNIGKNELSPDVSNLDELNKAIAKIDADVIVLTEIDNKTARSKKVHQLEEIAKAN 106

Query: 50  LQSLNYHIETCGQKSYNGVAILSKYQPIE--IVTHLPGDDLDVQARFIEATFTINTQTLR 107
                +           GV ILSKY+  +  ++    GD         + +       + 
Sbjct: 107 KMDFAFGKALDFDGGEYGVGILSKYKIDKSKVINLPSGDAEQRVVLISQISKPGFDAPII 166

Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167
           +       G  +   K         R +  AS           A    I+    +     
Sbjct: 167 VM------GTHLDWQKDPTIRIGQVRHILDASIGDTDTGFDNIAASIKILAGDFNSTA-- 218

Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227
              N+                     +  A +                       IDHI 
Sbjct: 219 ---NEQPIQEIRYMWNPVELKGIDYRSWPAVNPAID-------------------IDHIF 256

Query: 228 LSPEATSLLHSARI--DTKPRGWTKPSDHTPVIVSLDIPE 265
                   +    I  D+K   W+  SDH P+I  L++ E
Sbjct: 257 TFKGQVWDVKKMEIPTDSKEFQWSSVSDHLPIIAELELQE 296


>gi|147857933|emb|CAN80388.1| hypothetical protein VITISV_000106 [Vitis vinifera]
          Length = 1130

 Score = 48.6 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/243 (13%), Positives = 72/243 (29%), Gaps = 28/243 (11%)

Query: 18  IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPI 77
              + A IK+   D++CLQETK +D       ++SL           +  V        I
Sbjct: 160 RKVIKALIKKQKVDLVCLQETKIQD--MSKGIIRSLG----VGRYLEWGAVDSRGAAGSI 213

Query: 78  EIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF 137
            +       DL            I      I  ++    +      +    + +      
Sbjct: 214 VVFWDNRVLDL----------VDIQRGVFSISCIFKNSED-----GFKWMFTGVYGPTLR 258

Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA 197
             +    EE     G +N        +N I+   +      +  + ++   +     ++ 
Sbjct: 259 RERESFWEELGAIKGLWNGPWCAAGDFNAILSPEERNRGGRMNSNMRRFLEIIEDLELKD 318

Query: 198 THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257
                  +++        +     R+D  + +    +     R    PR     SDH P+
Sbjct: 319 VPLVGGPFTW----NGGVNNQTFSRLDRFLFNEGWDNHFGDVRQCVLPR---PVSDHFPI 371

Query: 258 IVS 260
           ++ 
Sbjct: 372 LLD 374


>gi|74143952|dbj|BAE41277.1| unnamed protein product [Mus musculus]
          Length = 375

 Score = 48.6 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 31/97 (31%), Gaps = 5/97 (5%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73
           R  N+   IK  + D++CLQE   ++ ++  E    L+SL YH E   +           
Sbjct: 31  RFPNILKEIKHFDADVLCLQEV--QEDHYGTEIRPSLESLGYHCEYKMKTGRKPDGCAIC 88

Query: 74  YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
           ++               +              L +  
Sbjct: 89  FKHSRFSLLSVNPVEFCRRDIPLLDRDNIGLVLLLQP 125


>gi|301162733|emb|CBW22280.1| putative endonuclease/exonuclease/phosphatase family protein
           [Bacteroides fragilis 638R]
          Length = 279

 Score = 48.6 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/284 (13%), Positives = 78/284 (27%), Gaps = 54/284 (19%)

Query: 6   VATWNV------NSI---RARIHNLAAWIKENNPDIICLQET----------KTEDKNFP 46
           V ++N+      +S+   R R   +A  I   + DI+  QE           +  +    
Sbjct: 23  VMSFNIRYDNPEDSLDNWRYRKDRVANAIHFYDVDILGTQEVLHNQLEDLKLRLPEYGVV 82

Query: 47  ---FETLQSLNYHIETCGQKSYNGV-----AILSKYQPIEIVTHLPGDDLDVQARFIEAT 98
               E  +    +     +K    V       LS+   +       G    + +      
Sbjct: 83  GVGREDGKEKGEYSALWYKKDRFNVLDSGYFWLSETPEVAGSKGWDGACERIASWVKLQD 142

Query: 99  FTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP 158
                +   +       G                  +      L    P+I  GD+N  P
Sbjct: 143 KVSGKEYFALNTHLDHVGGMA--------RREGISLMLDRVNELSDGLPVIVTGDFNSEP 194

Query: 159 QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN 218
           +     +   + N      E     ++   + +  +          Y       +     
Sbjct: 195 ESDVIKHVTDFAN-----PEHLTDARQASPIVYGPSWSFHDFGKIPY-------NKRPL- 241

Query: 219 KGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
               ID++ +       +    I  +       SDHTPV+V+++
Sbjct: 242 ----IDYVFVRNGL--KVLRYGILAETENNAFLSDHTPVLVTVE 279


>gi|296230136|ref|XP_002760576.1| PREDICTED: protein angel homolog 2 isoform 2 [Callithrix jacchus]
 gi|296230138|ref|XP_002760577.1| PREDICTED: protein angel homolog 2 isoform 3 [Callithrix jacchus]
          Length = 418

 Score = 48.6 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 5/63 (7%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73
           R  N+   IK  + D++CLQE   ++ ++  E    L+SL YH E   +           
Sbjct: 74  RFPNILKEIKHFDADVLCLQEV--QEDHYGAEIRPSLESLGYHCEYKMRTGRKPDGCAIC 131

Query: 74  YQP 76
           ++ 
Sbjct: 132 FKH 134


>gi|260170561|ref|ZP_05756973.1| hypothetical protein BacD2_01735 [Bacteroides sp. D2]
 gi|315918907|ref|ZP_07915147.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313692782|gb|EFS29617.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 366

 Score = 48.6 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 47/272 (17%), Positives = 87/272 (31%), Gaps = 33/272 (12%)

Query: 3   VVTVATWNVNSIR------ARIHNLAAWIKENNPDIICLQETKTEDK---NFPFETLQSL 53
           ++TVAT+NV++        +    +A++++    DI+C QE    D+   +     L   
Sbjct: 109 ILTVATYNVDAFNHEDTGYSC-KEIASYMRNLQADILCFQEFGINDEFGVDSIAAVLSDW 167

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
            Y+      +  +    L+ +    I         D +   +      N +T+R+ N +L
Sbjct: 168 PYYFIPISPEGKHL-LQLAVFSRYPIKEENLIVYPDSKNCSLWCDIETNGRTIRLFNNHL 226

Query: 114 PHGNPITSTKYDDKISWIKRFLRFAS------QRLELEEPLIFAGDYNIIPQPHDCYNPI 167
                  + +  +K        R           L        A    +         P 
Sbjct: 227 QTTEVSQNKRKLEKGLRTDDSQRVERAAVGLIDGLHENFRKRAAQANTLKQLIAASPYPT 286

Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227
           I   D               +        + H    +Y+F       + K+  +RID+I+
Sbjct: 287 IVCGDFNSLPSSYVYHTVKGDKLQDGFQTSGHGY--MYTF------KFFKHL-LRIDYIL 337

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
            SPE  S                 SDH PV++
Sbjct: 338 HSPELNST-------DYFSPDLTYSDHNPVVM 362


>gi|221040040|dbj|BAH11783.1| unnamed protein product [Homo sapiens]
          Length = 418

 Score = 48.6 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 5/63 (7%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73
           R  N+   IK  + D++CLQE   ++ ++  E    L+SL YH E   +           
Sbjct: 74  RFPNILKEIKHFDADVLCLQEV--QEDHYGAEIRPSLESLGYHCEYKMRTGRKPDGCAIC 131

Query: 74  YQP 76
           ++ 
Sbjct: 132 FKH 134


>gi|281352819|gb|EFB28403.1| hypothetical protein PANDA_012024 [Ailuropoda melanoleuca]
          Length = 111

 Score = 48.6 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 40/108 (37%), Gaps = 12/108 (11%)

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
               E R     L  M FTD  R  H     Y+F+     ++S     R+DHI+      
Sbjct: 13  QINKERRALNDTLDEMDFTDIFRTFHPKATEYTFFSSAHGTFS-----RVDHILGHKSGL 67

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
           +      I          SDH+   + L++    K  ++S +  +K I
Sbjct: 68  NQYQKIGIIPWIL-----SDHS--GLKLELKHKGKVGKNSNTWRLKSI 108


>gi|323528578|ref|YP_004230730.1| endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1001]
 gi|323385580|gb|ADX57670.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1001]
          Length = 302

 Score = 48.6 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 17/38 (44%), Gaps = 4/38 (10%)

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           D I ++ +    + S  +D   R     SDH P+ + L
Sbjct: 256 DFIFVTEDLAPRVASCEVDPHSRS----SDHQPMWLEL 289


>gi|332109156|gb|EGJ10079.1| hypothetical protein RBXJA2T_07110 [Rubrivivax benzoatilyticus JA2]
          Length = 269

 Score = 48.6 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/270 (13%), Positives = 71/270 (26%), Gaps = 34/270 (12%)

Query: 4   VTVATWNVN--------SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55
           + VAT+N++          R  IHNL   ++  + D++ LQE +       F T +S  +
Sbjct: 21  LRVATYNIHKGVRGVGRGKRLEIHNLGLAVESFDADMVFLQEVRL------FNTRESRRF 74

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
              + G         L+                      + + + I    +   ++    
Sbjct: 75  QRTSFGWPEQGQAEFLAPEGYDVAYRTNAITRHGEHGNALLSRWPIGD--IGHHDVSDHR 132

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
                      +   +      A   L     L                   +      F
Sbjct: 133 FEQRGLLHVPVQWQGMTVHAVVAHFGLVHASRLRQVARLA-EFIDATVPPGEMLIVAGDF 191

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWD---YYADSWSKNKGIRIDHIMLSPEA 232
                +    +  +G   A           +F      +A      +G+R          
Sbjct: 192 NDWGERLDSPMATIGLQRAFAPESTRQQRLTFPSLAPVFALDRFYLRGLR---------- 241

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
                S  +      W + SDH P++  L+
Sbjct: 242 ---CVSTMVPRG-MAWARMSDHLPLVAELE 267


>gi|313158592|gb|EFR57986.1| endonuclease/exonuclease/phosphatase family protein [Alistipes sp.
           HGB5]
          Length = 320

 Score = 48.6 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/307 (12%), Positives = 70/307 (22%), Gaps = 63/307 (20%)

Query: 4   VTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNF--------- 45
           + +  WN+         N       N  AW+K  +PD+ C      E ++          
Sbjct: 29  MRLLYWNIQNGMWSDQSNG----YDNFVAWVKGYDPDV-C---VWCEAQSIYKSGTAERV 80

Query: 46  ------------PFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR 93
                                Y      + ++  V                  D  V   
Sbjct: 81  DSVDRYLTANWGELAARYGHKYWYVGGHRDNFPQVVTSKYPIENVRRIVGQAPDSIVSHG 140

Query: 94  FIEATFTINTQTLRI------GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEP 147
              A    N + + I         Y        ++K +      +R          +   
Sbjct: 141 AGWARIVKNGRPVNIVTLHTWPQAYAFQAVDRDASKAEHGGDRYRRMEIEYICSHTIATQ 200

Query: 148 LIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF 207
                   ++    +  + +          + R                        +  
Sbjct: 201 SDAGQQLWMMMGDFNSRSRLDNRIYNYPDDDTRLLVHDYIAEHTPYVDVIAEKHPGEF-H 259

Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK-----PRGWTK------PSDHTP 256
              +  S       RID +  +P     +  A +         R   K      PSDH P
Sbjct: 260 TTTHGQS-------RIDFVYCTPPLCERITRAEVIADDFTEPVRDPGKLSNFYHPSDHRP 312

Query: 257 VIVSLDI 263
           ++V  D+
Sbjct: 313 ILVDFDM 319


>gi|114572548|ref|XP_001170966.1| PREDICTED: hypothetical protein isoform 1 [Pan troglodytes]
          Length = 418

 Score = 48.6 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 5/63 (7%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73
           R  N+   IK  + D++CLQE   ++ ++  E    L+SL YH E   +           
Sbjct: 74  RFPNILKEIKHFDADVLCLQEV--QEDHYGAEIRPSLESLGYHCEYKMRTGRKPDGCAIC 131

Query: 74  YQP 76
           ++ 
Sbjct: 132 FKH 134


>gi|329770281|ref|ZP_08261669.1| hypothetical protein HMPREF0433_01433 [Gemella sanguinis M325]
 gi|328836839|gb|EGF86487.1| hypothetical protein HMPREF0433_01433 [Gemella sanguinis M325]
          Length = 719

 Score = 48.6 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 33/82 (40%), Gaps = 10/82 (12%)

Query: 199 HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT---KPSDHT 255
           H+    YS++ Y   + S      +D+I++S      +  + +           + SDH 
Sbjct: 574 HEAGDRYSYF-YRGSNQS------LDNILVSKNIKDRVLFSPVHINASFMEEHGRASDHD 626

Query: 256 PVIVSLDIPEPRKKQQDSTSQN 277
           PV+V +D  +  +      + N
Sbjct: 627 PVVVQIDFSKSEEVVSPEVTPN 648


>gi|229917919|ref|YP_002886565.1| Endonuclease/exonuclease/phosphatase [Exiguobacterium sp. AT1b]
 gi|229469348|gb|ACQ71120.1| Endonuclease/exonuclease/phosphatase [Exiguobacterium sp. AT1b]
          Length = 247

 Score = 48.6 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 42/269 (15%), Positives = 84/269 (31%), Gaps = 36/269 (13%)

Query: 4   VTVATWNVNS----IRARIHNLAAWIKENNPDIICLQETKTEDKN-FPFETLQSLNY-HI 57
           + +AT+N+ +     + RI  +   +K  N D+I LQE ++ +K     +  ++  Y + 
Sbjct: 1   MRIATYNIWNHDTLWQKRIDAICQEVKRINADVIALQEVRSYEKGSVAHDIAEATGYPYC 60

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
                       +    +           +   +    E+ F     TL  G       N
Sbjct: 61  VFHAYPDSPDEGLAFLSKVP-----FSSVEAIWEEDVEESNFCATRVTLIFGGQEWGLTN 115

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP--HDCYNPIIWENDACF 175
              + +           +R    +   +   +  GD+N  PQ   +D  +   W +   F
Sbjct: 116 VHLNWRSSSIRECQMEVVRDWLSKGHQKAIEVLCGDFNDHPQSTIYDDVSDAGWLDVTTF 175

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
             E  +    +++  +  +                           R D I+   E + L
Sbjct: 176 VGEEARPTLDVKHNPYLQSSHLEQPE--------------------RYDWILFRSEWSEL 215

Query: 236 -LHSARIDTKPR--GWTKPSDHTPVIVSL 261
            +    +    R      PSDH  V+V  
Sbjct: 216 EVQHVDVFGDMRTSRDVVPSDHYGVVVDF 244


>gi|269959773|ref|ZP_06174152.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269835527|gb|EEZ89607.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 287

 Score = 48.6 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/288 (13%), Positives = 83/288 (28%), Gaps = 50/288 (17%)

Query: 2   SVVTVATWNV-----NSIR-ARIHN----LAAWIKENNPDIICLQET-------KTEDKN 44
           + + + +WN+     +  + +R       L  ++ +   DI+  QE        K    +
Sbjct: 20  NSINLTSWNIEWLSIDGGKVSRTPQDFEKLTHYVDKTQADILAFQEVESAAAIQKAVGND 79

Query: 45  FPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEI-------VTHLPGDDLDVQARFIEA 97
           F        N           N     +    + +       +T             +  
Sbjct: 80  FTIYLSDRANASNRHLQFNDTNQYTGFAVRNGVNVLDKPDFSITRGNSKLRFASYLVLNP 139

Query: 98  TFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII 157
                T  L +       G    +          +   ++   R + ++  +  GD+N  
Sbjct: 140 NQDNETHLLSVHLKAGCSGAYRNNRDCKIVKQQGQALAKWIKAREDNKQQYVVLGDFNHN 199

Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK 217
                 +   +  ++    L  +      +      + R  + TH   S           
Sbjct: 200 LGYRGDWLWEVLSDNTDAKLVTKN----TKAECKVRSNRNPNKTHQFRSV---------- 245

Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWT----KPSDHTPVIVSL 261
                IDHI++S +  +   S+ + T  +       K SDH PV  +L
Sbjct: 246 -----IDHIIVSGDLKA---SSGVQTVFKTQDVLDYKLSDHCPVSTTL 285


>gi|163789004|ref|ZP_02183448.1| endonuclease/exonuclease/phosphatase family protein
           [Flavobacteriales bacterium ALC-1]
 gi|159875668|gb|EDP69728.1| endonuclease/exonuclease/phosphatase family protein
           [Flavobacteriales bacterium ALC-1]
          Length = 332

 Score = 48.6 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 41/273 (15%), Positives = 81/273 (29%), Gaps = 46/273 (16%)

Query: 4   VTVATWNVNSIRA---------RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           +++ ++NV S +           I  +   +   NPDI+ LQE      +   E L+   
Sbjct: 92  ISLISYNVRSFKQPVHSDSQQNAITEIKKIVDSINPDILLLQE------SSYKEGLRIKG 145

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           Y     G +      +L+ Y    I+     D  D     I A   I   T+RI N +L 
Sbjct: 146 YSNVFLGYRKDVQKTLLTIYSKYPIINKGFIDFSDTYNNAIFADLKIKQDTVRIYNTHLQ 205

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
                     D    +       ++   ++E+  +              +          
Sbjct: 206 SFVFAPHIIADKYNDYNYLSNLNSTISKQVEQAKLVK-----------NHASKSNSKVII 254

Query: 175 FTLEVRQSFQKLQNMGFTD----AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230
                  S+ +   +   +     +   +     YS   Y          +R+D+ +   
Sbjct: 255 CGDFNATSYSQPYRILKKELNDSYVSNGNGFGATYSLLRYP---------LRLDYFLSDK 305

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +         + +        SDH P+ +   I
Sbjct: 306 QI-------EVLSHKNFDFNLSDHEPIYIKFKI 331


>gi|170650688|ref|NP_612535.1| nocturnin [Rattus norvegicus]
 gi|149064849|gb|EDM15000.1| similar to Nocturnin (CCR4 protein homolog) [Rattus norvegicus]
          Length = 428

 Score = 48.6 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/264 (13%), Positives = 68/264 (25%), Gaps = 28/264 (10%)

Query: 21  LAAWIKENNPDIICLQETKTEDKNFPFE--TLQSLNYHIETCGQKSYNGVAILSKYQPIE 78
           +   I    PDI+CLQE    D  F      L  L Y      +         S    +E
Sbjct: 176 ILEEILAYQPDILCLQEV---DHYFDTFQPLLSRLGYQGTFFPKP-------WSPCLDVE 225

Query: 79  IVTHLPGD--DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
                 G           +  +  I    + +    +     +   +   +       L+
Sbjct: 226 HNNGPDGCALFFLQSRFKLINSTNIRLTAMTLKTNQVAIAQTLECKESGRQFCIAVTHLK 285

Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN----MGFT 192
             +               N+         P+I   D               +        
Sbjct: 286 ARTGWERFRSAQGCDLLQNLQNITEGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAY 345

Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR------ 246
             +     +   Y+ W        ++    +D+I  S  A S+  +  + T+ +      
Sbjct: 346 KLLSPDGQSEPPYTTWKIRTSGECRHT---LDYIWYSRHALSVTSALDLLTEEQIGPNRL 402

Query: 247 -GWTKPSDHTPVIVSLDIPEPRKK 269
             +  PSDH  ++      E   +
Sbjct: 403 PSFHYPSDHLSLVCDFSFNEEPDE 426


>gi|254438485|ref|ZP_05051979.1| endonuclease/exonuclease/phosphatase family [Octadecabacter
           antarcticus 307]
 gi|198253931|gb|EDY78245.1| endonuclease/exonuclease/phosphatase family [Octadecabacter
           antarcticus 307]
          Length = 289

 Score = 48.6 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 41/287 (14%), Positives = 74/287 (25%), Gaps = 51/287 (17%)

Query: 2   SVVTVATWNVNSI---RA----------RIHN-LAAWIKENNPDIICLQET----KTE-D 42
           + + +AT+NV+ I   R+          R    L    K  + D+I  QE     + +  
Sbjct: 28  NTLRIATYNVHYIWLGRSQGDWSVGDWERRKGPLQTAFKTLDADVIGFQEMESFGRGQAP 87

Query: 43  KNFPFETLQS--LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT 100
            N   + L+S  L+Y     G  S         Y+   ++    G         +  + T
Sbjct: 88  ANLTLDWLESQNLDYAAAAVGDPSTFPSTQPIFYRKDRLLLRDQGWFFFSDTPDVIYSRT 147

Query: 101 INTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP 160
            N       +     G                    F    L  E         +     
Sbjct: 148 FNGSWPAFASWAEFEGR---------------DGTIFRVYNLHTEYRSRSNRRLSAALVA 192

Query: 161 HDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG 220
                P+                     +     +          +FW      +  N+G
Sbjct: 193 QRIAEPMQRMPVFVIGDFNAIRGSATLGLLEDANV----------TFWPAQGSKFHFNRG 242

Query: 221 I----RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +     ID I  S     +  +  +          +DH PV+    +
Sbjct: 243 LNLFPAIDRIGGSERIVPVGETFSV-RGQFDGEWATDHYPVVGDFRV 288


>gi|153009147|ref|YP_001370362.1| endonuclease/exonuclease/phosphatase [Ochrobactrum anthropi ATCC
           49188]
 gi|151561035|gb|ABS14533.1| Endonuclease/exonuclease/phosphatase [Ochrobactrum anthropi ATCC
           49188]
          Length = 369

 Score = 48.6 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 47/141 (33%), Gaps = 24/141 (17%)

Query: 145 EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL 204
           +   +  GD+N   +                 +E   +   L   GF   +         
Sbjct: 230 DRRWLICGDFNDYRERIIIGGDEWNGYQFTPMVEEESALDVLLADGFAVNLVERRPVMDR 289

Query: 205 YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA-------------------RIDTKP 245
           ++   Y+     +    ++D+IM SP        A                   +I+  P
Sbjct: 290 WTL--YHTRGPQERHLCQLDYIMASPSFAKKNEKAVPNIIRRGQPWRTIFPPDQQIERYP 347

Query: 246 R-GWTKP--SDHTPVIVSLDI 263
           R GW +P  SDH PV V+L++
Sbjct: 348 RTGWDRPKASDHCPVAVTLNM 368


>gi|148982124|ref|ZP_01816600.1| hypothetical protein VSWAT3_19371 [Vibrionales bacterium SWAT-3]
 gi|145960657|gb|EDK26003.1| hypothetical protein VSWAT3_19371 [Vibrionales bacterium SWAT-3]
          Length = 291

 Score = 48.6 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/275 (14%), Positives = 77/275 (28%), Gaps = 22/275 (8%)

Query: 4   VTVATWNVN--SIRARIHNLAA------------WIKENNPDIICLQETKTEDKNFPFET 49
           +T+++WN+   S    ++  +             + +  N D++  QE    D     + 
Sbjct: 23  LTISSWNIEWLSTNEAVNKFSDKRDQADFDKLGRYFQSLNADVVAFQEV---DDVNAIQR 79

Query: 50  LQSLNYHI-ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108
           +    Y I  +      NG     +           G  L   A F   T + +      
Sbjct: 80  VAGDQYQILMSDRALPKNGNHQFKEVNQYTGFAVRKGVALTDYADFPLETTSNSKLRFAS 139

Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168
             +      PI       K      +          E+            + ++ Y  + 
Sbjct: 140 YIVIETETKPIHMLSVHLKAGCSGAYKSNRDCSRLKEQAQQLNKWIKQRERNNEDYAILG 199

Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
             N            +  Q      A R T     + S      +  +      IDHI++
Sbjct: 200 DFNHNLAYSRDWIWKELTQYTDAQLATRKTRADCKVRS---NRNNHRTHQFRSVIDHIVV 256

Query: 229 SPEATSLLHSARIDTKPRGWT-KPSDHTPVIVSLD 262
           S    +     ++         K SDH PV  +++
Sbjct: 257 SESLNAAPAKQQVFKTQDVLDYKLSDHCPVSTTIN 291


>gi|125579119|gb|EAZ20265.1| hypothetical protein OsJ_35869 [Oryza sativa Japonica Group]
          Length = 345

 Score = 48.6 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/294 (13%), Positives = 78/294 (26%), Gaps = 52/294 (17%)

Query: 2   SVVTVATWNVNS------IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55
               + T+NV         R R+  L   IK +NPD+IC QE                 Y
Sbjct: 74  KTFKIMTYNVWFHEDLELCR-RMDALGDLIKNHNPDLICFQEV------------TPNIY 120

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
            +             LS    ++   +           F    F+ +     +   ++  
Sbjct: 121 LLLQKSDWWQEYRCSLSNSMAMQRKYYCMQMSKLPVESFDCTPFSNSIMGRELCVAHVKT 180

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP-IIWENDAC 174
           G  +        +           Q    E          I+    +      +  +D  
Sbjct: 181 GGAVKLVLATSHLESPMPGPPTWDQMYSTERVAQANKSLKILGSFRNVIFCGDMNWDDKG 240

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI--RIDHIMLSPEA 232
                  +       G+TDA          +++        S N+ +  R+D  +   + 
Sbjct: 241 DGPFPLPA-------GWTDAWIELKPGEDGWTYDTKANSMLSANRKLQKRLDRFVC--KL 291

Query: 233 TS------------------LLHSARIDTKPRGWT---KPSDHTPVIVSLDIPE 265
                                +   ++  + R       PSDH  +++S+ +  
Sbjct: 292 ADFKINNIQMIGKNAIPGLSYVKEKKVRKEVRKLELPVLPSDHFGLVLSITLES 345


>gi|221198686|ref|ZP_03571731.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans
           CGD2M]
 gi|221204948|ref|ZP_03577964.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans
           CGD2]
 gi|221174739|gb|EEE07170.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans
           CGD2]
 gi|221181137|gb|EEE13539.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans
           CGD2M]
          Length = 280

 Score = 48.6 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 25/58 (43%), Gaps = 3/58 (5%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
           +D I + P    LL    +    R     SDH P++  +  P+P  K + + +   +P
Sbjct: 216 LDRIWVHPG--ELLVDVAVHRSARAR-HASDHYPLVARMRAPQPEPKPEPAAAPFDRP 270



 Score = 47.9 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 7/41 (17%)

Query: 4  VTVATWNVNS------IRARIHNLAAWIKENNPDIICLQET 38
          + +AT+N++        RA    +AA I E + D+I LQE 
Sbjct: 29 LRIATYNIHGGYGPWHARAA-DRIAAVIDELDADVIALQEV 68


>gi|289774208|ref|ZP_06533586.1| secreted protein [Streptomyces lividans TK24]
 gi|289704407|gb|EFD71836.1| secreted protein [Streptomyces lividans TK24]
          Length = 274

 Score = 48.6 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 78/259 (30%), Gaps = 60/259 (23%)

Query: 18  IHNLAAWIKENNPDIICLQET------KTEDKNFPFETLQSLNYHIET------------ 59
           +  +A  I+++  D++ LQE       +++  + P E  + L YH+              
Sbjct: 53  LRRVANVIRKSGADVVGLQEVDKHYSARSDWADQPAELAELLGYHVVFGANIDNSPPAPG 112

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +  Y    +          T L       Q   + AT  ++ + +   N +L  G+  
Sbjct: 113 GHRVQYGTAILSRYPITASDNTWLYKSPGQEQRGLLHATLDVHGKKVEFYNTHLAAGSQA 172

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +                  +   +P I  GD+N +P   +         DA      
Sbjct: 173 DRLQQ----------TAQVVDLIGTRKPGILVGDFNALPAAPESQPLQNAYTDA------ 216

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
               + L   G      A   T                    RID I  +   T L+  A
Sbjct: 217 --WAKSLHARGDGATYPAQSPTE-------------------RIDLIYATRRVTPLV--A 253

Query: 240 RIDTKPRGWTKPSDHTPVI 258
           ++          SDH P++
Sbjct: 254 QVLKD---DPAASDHRPLL 269


>gi|256790330|ref|ZP_05528761.1| secreted protein [Streptomyces lividans TK24]
          Length = 279

 Score = 48.6 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 78/259 (30%), Gaps = 60/259 (23%)

Query: 18  IHNLAAWIKENNPDIICLQET------KTEDKNFPFETLQSLNYHIET------------ 59
           +  +A  I+++  D++ LQE       +++  + P E  + L YH+              
Sbjct: 58  LRRVANVIRKSGADVVGLQEVDKHYSARSDWADQPAELAELLGYHVVFGANIDNSPPAPG 117

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +  Y    +          T L       Q   + AT  ++ + +   N +L  G+  
Sbjct: 118 GHRVQYGTAILSRYPITASDNTWLYKSPGQEQRGLLHATLDVHGKKVEFYNTHLAAGSQA 177

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +                  +   +P I  GD+N +P   +         DA      
Sbjct: 178 DRLQQ----------TAQVVDLIGTRKPGILVGDFNALPAAPESQPLQNAYTDA------ 221

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
               + L   G      A   T                    RID I  +   T L+  A
Sbjct: 222 --WAKSLHARGDGATYPAQSPTE-------------------RIDLIYATRRVTPLV--A 258

Query: 240 RIDTKPRGWTKPSDHTPVI 258
           ++          SDH P++
Sbjct: 259 QVLKD---DPAASDHRPLL 274


>gi|242075302|ref|XP_002447587.1| hypothetical protein SORBIDRAFT_06g004861 [Sorghum bicolor]
 gi|241938770|gb|EES11915.1| hypothetical protein SORBIDRAFT_06g004861 [Sorghum bicolor]
          Length = 626

 Score = 48.6 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/242 (11%), Positives = 65/242 (26%), Gaps = 32/242 (13%)

Query: 23  AWIKEN----NPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIE 78
            W+KE+    + DI+ LQET     +F    L+ +                         
Sbjct: 316 NWVKEHILLEDLDIVALQET--MKHDFSNCELKEM-----------------AGTNDFHW 356

Query: 79  IVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFA 138
           +     G    +        F I    +    L     +  ++ +Y     +       +
Sbjct: 357 LWAPARGHSRGLITGVKSDDFEIEQTNISTFFLATLLRDRKSNHRYWIMNVYGPAHHDMS 416

Query: 139 SQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT 198
              L+          + I+            E +         +                
Sbjct: 417 EVFLQELNEFCVGNTFPILMGGDFNLTQNNNERNQGHGDPRLMTMFNNFIGDLQLKEIFI 476

Query: 199 HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVI 258
             +   +++    ++       I++D I+ S           + +K R     SDH+P++
Sbjct: 477 --SGVKFTW----SNKQRNPTLIKLDRILASTYWDIRYSRCFVWSKAR---VGSDHSPLL 527

Query: 259 VS 260
           + 
Sbjct: 528 LD 529


>gi|254452409|ref|ZP_05065846.1| endonuclease/exonuclease/phosphatase family [Octadecabacter
           antarcticus 238]
 gi|198266815|gb|EDY91085.1| endonuclease/exonuclease/phosphatase family [Octadecabacter
           antarcticus 238]
          Length = 290

 Score = 48.6 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/286 (13%), Positives = 76/286 (26%), Gaps = 51/286 (17%)

Query: 3   VVTVATWNVNSI---RA----------RIHN-LAAWIKENNPDIICLQET----KTEDKN 44
            + VAT+NV+ I   RA          R    L A     + D++  QE     + +   
Sbjct: 30  TLRVATYNVHYIWLGRAQGDWSVGDWERRKGALQAAFVSLDADVVGFQEMESFGRGQAPQ 89

Query: 45  -FPFETLQS--LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI 101
               + L+     Y     G  +         Y+   +     G         +  + T 
Sbjct: 90  NLTLDWLREQNPGYAAAAVGDPAVFPSTQPIFYRKDRLTLRDQGWFFFSDTPDVIYSRTF 149

Query: 102 NTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161
           N       +            +++D+   I R     ++   +    +            
Sbjct: 150 NGSWPAFTSWA----------EFEDRDGTIFRVYNLHTEYRSMSNKQLSVALVAARIAEP 199

Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI 221
               P+    D                                 +FW     ++  N+G+
Sbjct: 200 AARMPVFVIGDFNAIRGSTTLGVLEDANV---------------TFWPVQGSTFHFNRGL 244

Query: 222 ----RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                IDHI  S   + +  +  +          +DH PV+    +
Sbjct: 245 NLFPAIDHIGGSDGISPVGKTFSV-RGRFDGEWATDHYPVVGDFAV 289


>gi|147859197|emb|CAN81837.1| hypothetical protein VITISV_001932 [Vitis vinifera]
          Length = 342

 Score = 48.6 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 4  VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETK 39
          + + +WN   + +R     +  +++  NPD++  +ETK
Sbjct: 1  MKIISWNTKGLGSRKKRRVVKDFLRLENPDVVMFRETK 38


>gi|147768824|emb|CAN69264.1| hypothetical protein VITISV_040482 [Vitis vinifera]
          Length = 662

 Score = 48.6 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 2/38 (5%)

Query: 7   ATWNVNSIR-ARIHNLAA-WIKENNPDIICLQETKTED 42
            +WNV  +  +    +    IK    D++CLQETK ++
Sbjct: 408 LSWNVRGVNDSNKRRVIKSVIKSQKADVVCLQETKIKE 445


>gi|34392557|dbj|BAC82607.1| pol-like protein [Tetraodon nigroviridis]
          Length = 1302

 Score = 48.6 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/261 (14%), Positives = 66/261 (25%), Gaps = 26/261 (9%)

Query: 1   MSVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           M    ++T N+N  R+      L   +   N D++ +QET +  KN            I 
Sbjct: 10  MCDFNISTLNLNGARSDFKRAALFKLMDIKNIDVLLVQETHSCQKNHSDWRRAFNGEAIL 69

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
           + G     GV +L   + + I          V  +       +    L +   Y P    
Sbjct: 70  SHGSSLSGGVGVLFARRFLPISFTTDEIIPGVLLKVKAVFENVKLVFLSV---YAPTNQV 126

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
                 +     I          L  +     + D +         +       A     
Sbjct: 127 ERMAFLNILSDCIANSADEGFMFLGGDFNCTVSPDLDRNHPEPHPASARALGRLAE---- 182

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
                    +    D  R  +     Y++        S     R+D         ++   
Sbjct: 183 ---------SRELADVWRTFNREAKQYTYSHSRGMVLSA---ARLDRFYCFKHHFNVFKK 230

Query: 239 ARIDTKPRGWTKPSDHTPVIV 259
             I          +DH  V  
Sbjct: 231 CVI-----SPVGFTDHCLVTC 246


>gi|320168591|gb|EFW45490.1| hypothetical protein CAOG_03474 [Capsaspora owczarzaki ATCC 30864]
          Length = 397

 Score = 48.6 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/266 (11%), Positives = 64/266 (24%), Gaps = 21/266 (7%)

Query: 19  HNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYHIETCGQKSYN---------GV 68
             +   +K+ N DII L E        +    L    Y                     V
Sbjct: 132 DRVVKVLKDVNADIINLVEIENCTILYYLVNALPGFGYKPYLITGTDTATGQNVGILTRV 191

Query: 69  AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKI 128
                    E   + P       A     T  ++   L    +       +         
Sbjct: 192 DPYMAMTRDESRQNYPVPGTQCAAATASGTTGVSKHYLTAFQINNKKVGMMGLHLLSQPW 251

Query: 129 SWIKRFLRFASQRLELEEPLIFAGDYN-------IIPQPHDCYNPIIWENDACFTLEVRQ 181
                  R A   +            +                +       +     ++ 
Sbjct: 252 QAENCRKREAQALVARNAADTILAGVDELIFLGDFNDYDGTVLDIAGSVPTSRTLEYLKT 311

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYS-FWDYYADSWSK--NKGIRIDHIMLSPEATSLLHS 238
                        + +     + Y+ +WD       +  ++   IDH+++S    + + +
Sbjct: 312 PINPSTAHLALSNVASHVPLENRYTSWWDKDNSCVDEGGDEHTSIDHMLVSAGLAAGIQN 371

Query: 239 ARIDTKPRGWTKP-SDHTPVIVSLDI 263
              D +     +  SDH PV+V   +
Sbjct: 372 VLFDHEFVACCQCVSDHWPVVVDFAV 397


>gi|307136223|gb|ADN34060.1| endonuclease/exonuclease/phosphatase family protein [Cucumis melo
           subsp. melo]
          Length = 481

 Score = 48.6 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/237 (13%), Positives = 65/237 (27%), Gaps = 30/237 (12%)

Query: 1   MSVVTVATWNVNS-----IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55
           +  V + T+NV       +R R+  L   I+ ++PD+IC QE                 Y
Sbjct: 211 LKPVKIMTYNVWFREDLELRNRMRALGQLIQRHSPDVICFQEV------------TPAIY 258

Query: 56  HIE-TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
            I            +++           L                +I  + L IGNL + 
Sbjct: 259 DIFQITNWWKVYRCSVIKDSHSRGYFCMLLSKLPVKSFSCQPFPNSIMGRELCIGNLEVQ 318

Query: 115 HGNPITS-TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
           +G  +T  T + +              +  + +           P      +    +   
Sbjct: 319 NGISLTVATSHLESPCPAPPKWNQMYSKERVVQAKQAVDFLKETPNVIFGGDMNWDDKLD 378

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI--RIDHIML 228
                        + +             + +++        S N+ +  R+D  + 
Sbjct: 379 GQFPFPDGWIDAWEELR---------PGENGWTYDTKSNKMLSGNRTLQKRLDRFIC 426


>gi|282878661|ref|ZP_06287430.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           buccalis ATCC 35310]
 gi|281299206|gb|EFA91606.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           buccalis ATCC 35310]
          Length = 248

 Score = 48.6 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/243 (13%), Positives = 57/243 (23%), Gaps = 12/243 (4%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQP 76
           R   + + I+ +  DI   QE       F    +Q           +  +G         
Sbjct: 14  RKELVKSLIRFHEFDIFGTQE------GFKHMLVQIAELKQYAWIGEGRDGGDEGEHSAI 67

Query: 77  IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
                     D                      N     G             +   F  
Sbjct: 68  FYRKDRFDLLDSGNFWYSETPEKVGLGWDATCCNRICSWGKFREKISGKIFFLFNSHFDH 127

Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIR 196
                      L+     +I        +   +                L    +  +I+
Sbjct: 128 QGVIARRESARLLLQKIKSIAGTNATVISTGDFNATPESEPIRILLNDGLLLDSYKISIQ 187

Query: 197 ATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTP 256
             + T+   + W        K K  RIDHI ++ +    +    +         PSDH P
Sbjct: 188 PPYGTYGTSNGW----KIREKGKDQRIDHIFVTKDV--SIQKYGVINDIPYGQFPSDHYP 241

Query: 257 VIV 259
           V+V
Sbjct: 242 VMV 244


>gi|265763129|ref|ZP_06091697.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|263255737|gb|EEZ27083.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
          Length = 287

 Score = 48.6 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/284 (13%), Positives = 79/284 (27%), Gaps = 54/284 (19%)

Query: 6   VATWNV------NSI---RARIHNLAAWIKENNPDIICLQET----------KTEDKNFP 46
           V ++N+      +S+   R R   +A  I   + DI+  QE           +  +    
Sbjct: 31  VMSFNIRYDNPEDSLDNWRYRKDRVANAIHFYDVDILGTQEVLHNQLEDLKLRLPEYGVV 90

Query: 47  ---FETLQSLNYHIETCGQKSYNGV-----AILSKYQPIEIVTHLPGDDLDVQARFIEAT 98
               E  +    +     +K    V       LS+   +       G    + +      
Sbjct: 91  GVGREDGKEKGEYSALWYKKDRFNVLDSGYFWLSETPEVAGSKGWDGACERIASWVKLQD 150

Query: 99  FTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP 158
              + +   +       G                  +      L    P+I  GD+N  P
Sbjct: 151 KVSDKEYFALNTHLDHVGGMA--------RREGISLMLDRVNELSDGLPVIVTGDFNSEP 202

Query: 159 QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN 218
           +     +     N      E     ++  ++ +  +          Y       +     
Sbjct: 203 ESDVIKHVTDSVN-----PEHLTDARQASSIVYGPSWSFHDFGKIPY-------NKRPL- 249

Query: 219 KGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
               ID++ +       +    I  +       SDHTPV+V+++
Sbjct: 250 ----IDYVFVRNGL--KVLRYGILAETENNGFLSDHTPVLVTVE 287


>gi|254473115|ref|ZP_05086513.1| endonuclease/exonuclease/phosphatase family protein [Pseudovibrio
           sp. JE062]
 gi|211957836|gb|EEA93038.1| endonuclease/exonuclease/phosphatase family protein [Pseudovibrio
           sp. JE062]
          Length = 282

 Score = 48.6 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/272 (13%), Positives = 75/272 (27%), Gaps = 25/272 (9%)

Query: 21  LAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEI 79
           L  ++ +  PD++CLQE   T + +  +   +    H+       +  V           
Sbjct: 14  LLPYLSQALPDVLCLQEVVHTPESDKDWLAYRD-GDHVLPQRANFFRDVCEALPEHVAVF 72

Query: 80  VTHLPGDDLDVQARFIEATFTINTQTLR----------IGNLYLPHGNPITSTKYDDKIS 129
                G   D +                          +   Y   G             
Sbjct: 73  CPAAQGVLWDDEKSVPSQWGLATFVHRSFPIIGQVQGFVHKGYSADGYGEHPRSRSAHGV 132

Query: 130 WIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNM 189
            +  +       +     L         P        ++  + A    E  +      N+
Sbjct: 133 RVYDYASDRVVSITQMHGLRDLNGKMDTPDRLAQAKRLLKISQAVSEPEDLRVICGDFNV 192

Query: 190 GFTDAIRATHDTHH------LYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
                     +          Y F     +S+ K  G   D++++       + + ++  
Sbjct: 193 EPDSETIRLLEADGLVELVKHYGFETTR-NSYYKKPGKFADYMLIDQ--IEQISTFQVLQ 249

Query: 244 KPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTS 275
           KP    + SDH P++++L+      KQQ + S
Sbjct: 250 KP----EVSDHCPLVLTLNSDVTEAKQQRAHS 277


>gi|91781292|ref|YP_556499.1| hypothetical protein Bxe_C1289 [Burkholderia xenovorans LB400]
 gi|91693952|gb|ABE37149.1| Conserved hypothetical protein [Burkholderia xenovorans LB400]
          Length = 290

 Score = 48.6 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 17/38 (44%), Gaps = 4/38 (10%)

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           D I ++   T  + +  +D   R     SDH P+ + L
Sbjct: 256 DFIFVTENLTPRVAACEVDPHSR----ASDHQPLWLEL 289


>gi|8823|emb|CAA35587.1| unnamed protein product [Drosophila melanogaster]
          Length = 888

 Score = 48.6 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 73/259 (28%), Gaps = 40/259 (15%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           M+ + ++ WN N +      L  +I E N D++ L ET   +KN          Y     
Sbjct: 1   MASLRISLWNANGVSRHTQELTQFIYEKNIDVMLLSETHLTNKN----NFHIPGYLFYGT 56

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
                             I  H   +      +       +N  +  +  +Y P   PI+
Sbjct: 57  NHPDGKAHGGTGILIRNRIKHHHLNNFDKNYLQSTSIALQLNNGSTTLAAVYCPPRFPIS 116

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             ++                   L +  I AGDYN                         
Sbjct: 117 EDQF-------------MEFFNTLGDRFIAAGDYNAKHTHWGSRLVSPKGK--------- 154

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
               +L N       +  + +    ++W     +  +     ID   ++      + +A 
Sbjct: 155 ----QLYNALTKPENKLDYVSPGKPTYWP----ADPRKIPDLID-FAITKHVPRNMVTAE 205

Query: 241 IDTKPRGWTKPSDHTPVIV 259
                      SDH+PV +
Sbjct: 206 ALADLS-----SDHSPVFL 219


>gi|116251825|ref|YP_767663.1| hypothetical protein RL2065 [Rhizobium leguminosarum bv. viciae
          3841]
 gi|115256473|emb|CAK07557.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
          viciae 3841]
          Length = 267

 Score = 48.2 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 9/35 (25%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 4  VTVATWNVNSIRARIHNLAAWIKENNPDIICLQET 38
          + + + N    R     L  ++   +PD++CLQE 
Sbjct: 1  MRIISLNAWGGRLH-EALIEYVTAADPDVLCLQEV 34


>gi|42397986|gb|AAS13459.1| putative reverse transcriptase [Drosophila simulans]
          Length = 888

 Score = 48.2 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 73/259 (28%), Gaps = 40/259 (15%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           M+ + ++ WN N +      L  +I E N D++ L ET   +KN          Y     
Sbjct: 1   MASLRISLWNANGVSRHTQELTQFIYEKNIDVMLLSETHLTNKN----NFHIPGYLFYGT 56

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
                             I  H   +      +       +N  +  +  +Y P   PI+
Sbjct: 57  NHPDGKAHGGTGILIRNRIKHHHLNNFDKNYLQSTSIALQLNNGSTTLAAVYCPPRFPIS 116

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             ++                   L +  I AGDYN                         
Sbjct: 117 EDQF-------------MEFFNTLGDRFIAAGDYNAKHTHWGSRLVSPKGK--------- 154

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
               +L N       +  + +    ++W     +  +     ID   ++      + +A 
Sbjct: 155 ----QLYNALTKPENKLDYVSPGKPTYWP----ADPRKIPDLID-FAITKHVPRNMVTAE 205

Query: 241 IDTKPRGWTKPSDHTPVIV 259
                      SDH+PV +
Sbjct: 206 ALADLS-----SDHSPVFL 219


>gi|78066588|ref|YP_369357.1| endonuclease/exonuclease/phosphatase [Burkholderia sp. 383]
 gi|77967333|gb|ABB08713.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. 383]
          Length = 284

 Score = 48.2 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 4/38 (10%)

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           D + ++      +    ID   R     SDH PV++ L
Sbjct: 250 DFVFVTDTLLPRVTRCEIDGDVR----ASDHQPVLLEL 283


>gi|253566723|ref|ZP_04844175.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|251944286|gb|EES84775.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
          Length = 287

 Score = 48.2 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/284 (13%), Positives = 79/284 (27%), Gaps = 54/284 (19%)

Query: 6   VATWNV------NSI---RARIHNLAAWIKENNPDIICLQET----------KTEDKNFP 46
           V ++N+      +S+   R R   +A  I   + DI+  QE           +  +    
Sbjct: 31  VMSFNIRYDNPEDSLDNWRYRKDRVANAIHFYDVDILGTQEVLHNQLEDLKLRLPEYGVV 90

Query: 47  ---FETLQSLNYHIETCGQKSYNGV-----AILSKYQPIEIVTHLPGDDLDVQARFIEAT 98
               E  +    +     +K    V       LS+   +       G    + +      
Sbjct: 91  GVGREDGKEKGEYSALWYKKDRFNVLDSGYFWLSETPEVAGSKGWDGACERIASWVKLQD 150

Query: 99  FTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP 158
              + +   +       G                  +      L    P+I  GD+N  P
Sbjct: 151 KVSDKEYFALNTHLDHVGGMA--------RREGISLMLDRVNELSDGLPVIVTGDFNSEP 202

Query: 159 QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN 218
           +     +     N      E     ++  ++ +  +          Y       +     
Sbjct: 203 ESDVIKHVTDSAN-----PEHLTDARQASSIVYGPSWSFHDFGKIPY-------NKRPL- 249

Query: 219 KGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
               ID++ +       +    I  +       SDHTPV+V+++
Sbjct: 250 ----IDYVFVRNGL--KVLRYGILAETENNGFLSDHTPVLVTVE 287


>gi|291299746|ref|YP_003511024.1| endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis
           DSM 44728]
 gi|290568966|gb|ADD41931.1| Endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis
           DSM 44728]
          Length = 315

 Score = 48.2 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 44/294 (14%), Positives = 81/294 (27%), Gaps = 53/294 (18%)

Query: 4   VTVATWN-------VNSIRARIHNLAAWIKENNPDIICLQE---TKTED--KNFPFETLQ 51
           + V ++N       VN  RA    +  +IK    D+I LQE   T   +  K   ++ LQ
Sbjct: 37  LKVMSFNLWHGGSQVNDYRA--KQV-EFIKSTGADVITLQESSVTSARELAKALDWDYLQ 93

Query: 52  SL-------NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
           +         Y I    Q+  N    +           +    L             N  
Sbjct: 94  ADADRGIISRYEIVDDTQQPSNAGFGVHIELDSGQRVAVWNAHLGYDPYGPYDACFDNMS 153

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
              I       G          +I+ I   +R      +    L+               
Sbjct: 154 VDEILEREAESGRTG-------QITDILADMRDDLANADQTPVLLTGDFNAPSHLDWTAA 206

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY---SFWDYYADSWSKNKGI 221
                     ++     +  K    G TD+ R  +         ++    +  + K+ G 
Sbjct: 207 TADSHCG---YSDIPWPTSVKPAEAGLTDSFREANPDPAAVPGNTW----SPVYPKHDGS 259

Query: 222 --------RIDHIM------LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
                   RID+I+      ++     ++   +           SDH  V+ + 
Sbjct: 260 TGADEPQDRIDYILYKGGLTVTDSQALVVGEPQPVPDHADNEWTSDHAAVLTTF 313


>gi|126663886|ref|ZP_01734881.1| hypothetical protein FBBAL38_10402 [Flavobacteria bacterium BAL38]
 gi|126624150|gb|EAZ94843.1| hypothetical protein FBBAL38_10402 [Flavobacteria bacterium BAL38]
          Length = 316

 Score = 48.2 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/257 (14%), Positives = 60/257 (23%), Gaps = 23/257 (8%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +  WN              I    PDI+ + E ++E+K   F  L          G  
Sbjct: 1   MRIIEWNCQG---AFRKKNDRILSLQPDILIVPECESENK-LKFGDLTPKPNDFFWYGDS 56

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
              G+ I S       +  +                  +     I  +            
Sbjct: 57  ENKGIGIFSYSDYKFELLKIFNPRFRFIIPLKVIGKDSSFLLFAIWAMDNKEKPEERYIG 116

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
                      L      L  +       D             +   +D    LE +  F
Sbjct: 117 QIWLAINYYSNLLSLPCILTGDFNSNKIWD---------EKERVGNHSDMVGFLEKKNIF 167

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
                    +  +  H T H+Y             K   ID+   S          ++  
Sbjct: 168 CLYHMQENIEQGKEIHPTFHMY---------RKTEKPYHIDYFFASDLIIKDGFEIKVGK 218

Query: 244 KPRGWTKPSDHTPVIVS 260
               W   SDH P+ + 
Sbjct: 219 -VENWIDLSDHVPLTLE 234


>gi|157145931|ref|YP_001453250.1| hypothetical protein CKO_01684 [Citrobacter koseri ATCC BAA-895]
 gi|157083136|gb|ABV12814.1| hypothetical protein CKO_01684 [Citrobacter koseri ATCC BAA-895]
          Length = 300

 Score = 48.2 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/275 (13%), Positives = 67/275 (24%), Gaps = 38/275 (13%)

Query: 4   VTVATWNVNSIRARIHNLAAW------IKENNPDIICLQET-----KTEDKNFPFETLQS 52
           + +AT+N+        N+A +      IK+   DII + E      +++  +       +
Sbjct: 50  LRIATYNI-GKNEASENVADFTSLNAAIKKIAADIIAVPEVDNKTARSQKIDQLKTIADA 108

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
            NYH        ++G            + H    +L                        
Sbjct: 109 NNYHYAFGKALDFDGGEYGLGILSKYKIQHTQVINLPSGDAEQRVALLAQIAVPGFDTPV 168

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
           L     +   K         R L   S      +    A    I+    +         +
Sbjct: 169 LVMVTHLDWQKDPTMRIEQVRHLLDVSIGDASSDFKDIASSIKILAGDFNSTRDEQPLKE 228

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
             +                             Y  W     +        IDHI      
Sbjct: 229 IGYF------------------FNPVEKQGTDYRTWPAVNPAID------IDHIFTFKGQ 264

Query: 233 TSLLHSARIDTK--PRGWTKPSDHTPVIVSLDIPE 265
              +    I        W+  SDH P I  +++ E
Sbjct: 265 KWDVKKIDIPHNSPAFTWSSASDHLPFIADMELTE 299


>gi|312194867|ref|YP_004014928.1| endonuclease/exonuclease/phosphatase [Frankia sp. EuI1c]
 gi|311226203|gb|ADP79058.1| Endonuclease/exonuclease/phosphatase [Frankia sp. EuI1c]
          Length = 357

 Score = 48.2 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 7/46 (15%)

Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEP 266
           IRIDH++ SP          I    RG    SDH PVI +L +  P
Sbjct: 319 IRIDHVLASPAFA-------ITGYHRGGNDGSDHLPVIANLALRRP 357


>gi|238027065|ref|YP_002911296.1| endonuclease/exonuclease/phosphatase [Burkholderia glumae BGR1]
 gi|237876259|gb|ACR28592.1| Endonuclease/exonuclease/phosphatase [Burkholderia glumae BGR1]
          Length = 285

 Score = 48.2 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/289 (11%), Positives = 67/289 (23%), Gaps = 37/289 (12%)

Query: 4   VTVATWNV-----NSIRARI-HNLAAWIKENNPDIICLQE-TKT--------EDKNFPFE 48
           + +  WN+      S R  +   +A      + D+ C+QE T+             F   
Sbjct: 1   MRLIDWNIQWGRDASGRVELARTVAQARALADFDVWCVQELTRGFAALPGGPGPDQFAEL 60

Query: 49  TLQSLNY---HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT 105
                 Y              G     ++          G  L     +     T +   
Sbjct: 61  AALLPGYTVIEAIAVDLPPAAGGVARRQFGNAIATRLPVGRVLRHMLPWPAEAGTPSMPR 120

Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165
           + +       G P+          +           L  +        +   P       
Sbjct: 121 IALEVNLCGAGGPLRIVT-THLEFYSAAQRLAQVDALREQHREAAGHAHRPAPAETPDGP 179

Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWD-------------YYA 212
                      +    +     +               + ++               Y  
Sbjct: 180 FAGSARALDAIVCGDFNSAYRDDAYRRITAPIAGAPDLVDAWVQAHPGQTPPPTAGVYDT 239

Query: 213 DSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           + W     +  D + ++      +    ID    G T+ SDH P+++ L
Sbjct: 240 EQWQDGA-MTCDFVFVTDTLAKRIVRCEID----GATRASDHQPILLEL 283


>gi|207080050|ref|NP_001128793.1| DKFZP459I087 protein [Pongo abelii]
 gi|55728462|emb|CAH90974.1| hypothetical protein [Pongo abelii]
          Length = 212

 Score = 48.2 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 5/63 (7%)

Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73
          R  N+   IK  + D++CLQE   ++ ++  E    L+SL YH E   +           
Sbjct: 31 RFPNILKEIKHFDADVLCLQEV--QEDHYGAEIRPSLESLGYHCEYKMRTGRKPDGCAIC 88

Query: 74 YQP 76
          ++ 
Sbjct: 89 FKH 91


>gi|242827232|ref|XP_002488790.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
 gi|218712046|gb|EED11474.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
          Length = 1907

 Score = 48.2 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 20/56 (35%), Gaps = 3/56 (5%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278
           ID +  S    + + S   DTKP  W    DH P+    D+   R         N 
Sbjct: 803 IDLVWASHNLANRVVSC--DTKPEWWYGA-DHVPISTQFDLTAIRVPPLVRKQWNA 855


>gi|161522526|ref|YP_001585455.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans
          ATCC 17616]
 gi|189348598|ref|YP_001941794.1| metal-dependent hydrolase [Burkholderia multivorans ATCC 17616]
 gi|221211889|ref|ZP_03584867.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans
          CGD1]
 gi|160346079|gb|ABX19163.1| Endonuclease/exonuclease/phosphatase [Burkholderia multivorans
          ATCC 17616]
 gi|189338736|dbj|BAG47804.1| metal-dependent hydrolase [Burkholderia multivorans ATCC 17616]
 gi|221167974|gb|EEE00443.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans
          CGD1]
          Length = 278

 Score = 48.2 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 12/62 (19%)

Query: 4  VTVATWNVNS------IRARIHNLAAWIKENNPDIICLQE-----TKTEDKNFPFETLQS 52
          + +AT+N++        RA +  +AA I E + D+I LQE     T+  D   P      
Sbjct: 29 LRIATYNIHGGHGPWHARA-VDRIAAVIDELDADVIALQEVPLGGTRAPDVLAPLRDATG 87

Query: 53 LN 54
          ++
Sbjct: 88 MH 89



 Score = 35.9 bits (81), Expect = 6.7,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 15/37 (40%), Gaps = 3/37 (8%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
           +D I + P    LL    +    R     SDH P++ 
Sbjct: 216 LDRIWVHPG--ELLVDVVVHRSARAR-HASDHYPLVA 249


>gi|110737963|dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thaliana]
          Length = 910

 Score = 48.2 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 42/271 (15%), Positives = 84/271 (30%), Gaps = 27/271 (9%)

Query: 4   VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + V  WN+  + +R     + +WI  NN  + C  ET    +N              +  
Sbjct: 1   MKVFCWNIRGLNSRNRQRVVRSWIASNNLLVGCFLETHVAQEN------------ANSVL 48

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
             +  G  + S Y   E+       D  +     + T  I   +++I +L          
Sbjct: 49  ASTLPGWRMDSNYCCSELGRIWIVWDPSISVLVFKRTDQIMFCSIKIPSLLQSFA----- 103

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
             +    +            L L      +    ++    +             +L   +
Sbjct: 104 VAFVYGRNSELDRRSLWEDILVLSRTSPLSVTPWLLLGDFNQIAAASEHYSINQSLLNLR 163

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR-IDHIMLSPEATSLLHSAR 240
             + LQ       +         +++    ++    N  +R +D  + + E  ++  SA 
Sbjct: 164 GMEDLQCCLRDSQLSDLPSRGVFFTW----SNHQQDNPILRKLDRALANGEWFAVFPSAL 219

Query: 241 IDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271
               P G    SDH P I+ +D   P  K+ 
Sbjct: 220 AVFDPPGD---SDHAPCIILIDNQPPPSKKS 247


>gi|241888840|ref|ZP_04776146.1| lpxtg cell wall surface protein [Gemella haemolysans ATCC 10379]
 gi|241864516|gb|EER68892.1| lpxtg cell wall surface protein [Gemella haemolysans ATCC 10379]
          Length = 866

 Score = 48.2 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 32/81 (39%), Gaps = 10/81 (12%)

Query: 199 HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT---KPSDHT 255
           H+    YS++ Y   + S      +D++++S      +  + +           + SDH 
Sbjct: 576 HEQGDRYSYF-YRGSNQS------LDNVLISKNIKDKVVFSPVHINASFMEEHGRASDHD 628

Query: 256 PVIVSLDIPEPRKKQQDSTSQ 276
           PV+V +D  +    +    + 
Sbjct: 629 PVVVQIDFSKSAAPESPGLNP 649


>gi|297828519|ref|XP_002882142.1| endonuclease/exonuclease/phosphatase family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297327981|gb|EFH58401.1| endonuclease/exonuclease/phosphatase family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 444

 Score = 48.2 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/274 (13%), Positives = 75/274 (27%), Gaps = 37/274 (13%)

Query: 13  SIRARIHNLAAWIKENNPDIICLQETKTEDKN---FPFETLQSLNY-HIETCGQKSYNGV 68
            +R+    L   ++E + D++ LQ+ K ++ +      +   +L   ++         G 
Sbjct: 157 GLRSTRTAL-EVLRELDADVLALQDVKADEADQMRPLSDLAAALGMNYVFAESWAPEYGN 215

Query: 69  AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY---- 124
           AILSK+           DD D +     +     +  +     +L H +     K     
Sbjct: 216 AILSKWPIKSSDVLRIFDDTDFRNVLKASIEVPGSGEVEFHCTHLDHLDEKWRMKQVDAI 275

Query: 125 ----DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
               +                   E        Y  + +P      + +     +T    
Sbjct: 276 IRSTNVPHILAGALNSLDESDYSPERWTDIVKYYEEMGKPIPKAQVMRFLKSKEYTDAKD 335

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            + +    +                              G R+D+I+ S ++        
Sbjct: 336 FAGECESVVVVAKGQSVQGTCK----------------YGTRVDYILASSDSPYRFVPGS 379

Query: 241 IDTKPRGWTKPSDHTPVIVS------LDIPEPRK 268
                      SDH  V V       +++ E R 
Sbjct: 380 --YSVLSSKGTSDHHIVKVDVVKARAINVDEQRP 411


>gi|149020402|ref|ZP_01835294.1| peptide chain release factor 2 [Streptococcus pneumoniae SP23-BS72]
 gi|303260024|ref|ZP_07345998.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae SP-BS293]
 gi|303261430|ref|ZP_07347378.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae SP14-BS292]
 gi|303264097|ref|ZP_07350018.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae BS397]
 gi|303269531|ref|ZP_07355295.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae BS458]
 gi|147930704|gb|EDK81686.1| peptide chain release factor 2 [Streptococcus pneumoniae SP23-BS72]
 gi|302637564|gb|EFL68051.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae SP14-BS292]
 gi|302638943|gb|EFL69404.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae SP-BS293]
 gi|302640916|gb|EFL71299.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae BS458]
 gi|302646502|gb|EFL76728.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae BS397]
          Length = 271

 Score = 48.2 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/272 (11%), Positives = 72/272 (26%), Gaps = 14/272 (5%)

Query: 4   VTVATWNVNSI--RARIHNL---AAWIKENNPDIICLQETK-------TEDKNFPFETLQ 51
           +   T N +S   +            I E + D+IC QE          E  +       
Sbjct: 1   MKFLTLNTHSWMEKEAEEKFQILLEDILEKDYDLICFQEINQEMTSSEVEVNDLYQALPA 60

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
           +   H +   +     +    K        +  G D   +   I +   I  + + + ++
Sbjct: 61  AEPIHQDHYVRLLVEKLLEQGKNYYWTWAYNHIGYDRYHEGVAILSKTPIEAREILVSDV 120

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
             P           + +   K     +      ++                    ++  +
Sbjct: 121 DDPTDYHTRRVALAETVVDGKELAVASVHLSWWDKGFQEEWARFEAVLKKLNKPLLLAGD 180

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
                 +          +G  DA     +    Y+            + +RID++  + E
Sbjct: 181 FNNPAGQEGYQAILASPLGLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTTKE 240

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
               + +  +        + SDH  +   L+ 
Sbjct: 241 LA--VENLHVVFDGNKSPQVSDHYGLNAVLNW 270


>gi|126307063|ref|XP_001374687.1| PREDICTED: similar to LOC90806 protein [Monodelphis domestica]
          Length = 544

 Score = 48.2 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 36/107 (33%), Gaps = 5/107 (4%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73
           R  N+   IK  + DI+CLQE   ++ ++  E    L+SL YH E   +           
Sbjct: 201 RFPNILREIKHMDADILCLQEV--QEDHYRKEIKPNLESLGYHCEYKMRTGRKPDGCAIC 258

Query: 74  YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           ++  +            +              L +   +    +PI 
Sbjct: 259 FKCSKFTLLSANPVEFYRRDIPLLDRDNVGLVLLLQPKFHCTASPIC 305


>gi|88799498|ref|ZP_01115075.1| hypothetical protein MED297_03917 [Reinekea sp. MED297]
 gi|88777808|gb|EAR09006.1| hypothetical protein MED297_03917 [Reinekea sp. MED297]
          Length = 280

 Score = 48.2 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/277 (12%), Positives = 72/277 (25%), Gaps = 36/277 (12%)

Query: 4   VTVATWNVNSI---------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           + VA+ N++ I           R   + A I +   DI+  QE          E+     
Sbjct: 25  LRVASHNIHYILPNNPDDDWETRRDAVIAVIDDMAADILAFQE---------MESFVG-- 73

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT--INTQTLRIGNLY 112
                      + V            +         Q                       
Sbjct: 74  --GVNHQNLQLDWVLEHHPDYNAGAFSDNADQFPITQPILYRRDRFSLQTQGFFFFSETP 131

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
               +     +Y   +SW++ F     + L +          +   Q  +     I +  
Sbjct: 132 DVIYSRQWDGRYPYFVSWVELFDHTNDRNLFVFNFHNDFASRSNRRQSSELTAERIEQIA 191

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR----IDHIML 228
               + +   F         +                    S ++  G++    IDHI++
Sbjct: 192 GETPVILLGDFNAPVWFREVERFEPKLTPIKP-------GGSTNRILGLKLLPAIDHILI 244

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           S +  +     ++  +  G   PSDH P+   +   +
Sbjct: 245 SDDFVAD-TDVQVWDRRYGGEYPSDHFPISADIRFSD 280


>gi|86141714|ref|ZP_01060238.1| hypothetical protein MED217_01245 [Leeuwenhoekiella blandensis
           MED217]
 gi|85831277|gb|EAQ49733.1| hypothetical protein MED217_01245 [Leeuwenhoekiella blandensis
           MED217]
          Length = 279

 Score = 48.2 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/268 (12%), Positives = 71/268 (26%), Gaps = 24/268 (8%)

Query: 6   VATWNV------NSIRARIHNLAAWIKEN----NPDIICLQETKTEDKNFPFETLQSLNY 55
           + T+N+      +   A       ++        PD++ +QE     +   +       Y
Sbjct: 24  LMTYNIRMATESDGADAWSKR-KEYLTSQVLFYAPDVMGVQE--ALPEQMDYLGKHLTGY 80

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
                G++  N     + +   + +  L  D   +     + +   +    RI    L  
Sbjct: 81  KHVGVGREGKNKGEFSAIFYNADRLKVLEDDTFWLSETPEKISTGWDAALPRICTYALFK 140

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
                   Y                        +       +   +         N    
Sbjct: 141 DKKSGEKFYVFNT-----HFDHVGIEARKNASALILAKIKELNPKNLPAFVSGDLNLEPD 195

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
           +  +     +L +        A            +    +++    RID+I      TS 
Sbjct: 196 SAPIAVLKTELDDTYELAPNGAFGPKG------TFNGFKFTEPVTRRIDYIFQVKSNTSK 249

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +    I +  +    PSDH PV V + +
Sbjct: 250 VLKHAILSDSKDLHYPSDHLPVYVLIAL 277


>gi|326497739|dbj|BAK05959.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 524

 Score = 48.2 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/293 (12%), Positives = 77/293 (26%), Gaps = 62/293 (21%)

Query: 2   SVVTVATWNVNS-----IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56
             + V T+NV       +  R+H L   I+ +NPD+IC QE          ++     Y 
Sbjct: 255 KTIKVMTYNVWFREDLELTKRMHALGNLIQHHNPDLICFQEVTPNIYQLLQKSGWWQEYK 314

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                + +        +   + + +       +           IN   +    L   H 
Sbjct: 315 CSLSARMAMQRQYYCMQMSKLPVNSFNCIPFSNSVMERELCVGDINIGGVTKMVLATSHL 374

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
               +         + +         +    +                   +  +D    
Sbjct: 375 ESPCAWNQMYSKERVVQANASMRILDKFRNVIFCGD---------------MNWDDKGDG 419

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW-SKNKGI--RIDHIMLSPEAT 233
                        G+ DA          +++ D  A+   + N+ +  R+D  +      
Sbjct: 420 PFPLP-------NGWIDAWAELKPGEDGWTY-DTRANGMLAGNRKLQKRLDRFVC----- 466

Query: 234 SLLHSARID------------------TKPRGWTK-------PSDHTPVIVSL 261
             L    ID                     R   +       PSDH  +++S+
Sbjct: 467 -KLPDFEIDSIEMIGKEAIPGISHYKEKTVRKVVQNIEYPVLPSDHFGLVLSI 518


>gi|270295395|ref|ZP_06201596.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|270274642|gb|EFA20503.1| conserved hypothetical protein [Bacteroides sp. D20]
          Length = 283

 Score = 48.2 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 41/276 (14%), Positives = 80/276 (28%), Gaps = 40/276 (14%)

Query: 6   VATWNV---------NSIRARIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQS--L 53
           V ++N+         N+ + R  N A  I    PDI+ +QE  K +  +      Q   L
Sbjct: 30  VMSFNIRLDHVADSMNNWKYRKDNAAQMIAYYAPDIVGMQEVVKNQLNDLKERLPQYTAL 89

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
                   +K           +   +     G      +   +       + +    +  
Sbjct: 90  GVGRADGKEKGEYCSLFYKTERFELLKNGDFGLSETPDSIGKKGWDAACERIVT-WAVLK 148

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
              +      ++     +    R  S +L LE+    AG+               +    
Sbjct: 149 DKVSGRKVAAFNTHFDHVGEVARRESAKLILEKIKQIAGEL-------PVIITGDFNGTV 201

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR-IDHIMLSPEA 232
                   +   ++N   T  +            W ++       +  R ID I ++   
Sbjct: 202 DSEPVTILTEGGMRNACSTAKVVYGPT-------WSFHDFGRIPVEKRRLIDFIFVNA-- 252

Query: 233 TSLLHSARIDTKPRGWTKP-----SDHTPVIVSLDI 263
                S  ++       KP     SDH PV+V+L +
Sbjct: 253 -----SVEVERYRTVGDKPDNGYLSDHAPVLVTLKL 283


>gi|251800194|ref|YP_003014925.1| endonuclease/exonuclease/phosphatase [Paenibacillus sp. JDR-2]
 gi|247547820|gb|ACT04839.1| Endonuclease/exonuclease/phosphatase [Paenibacillus sp. JDR-2]
          Length = 264

 Score = 48.2 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/244 (13%), Positives = 68/244 (27%), Gaps = 10/244 (4%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQP 76
           R+      I++++P +I  QE            ++   Y     G+   +     + +  
Sbjct: 26  RVDRATNVIRKHHPLLIGTQE--GYHSMLKDLEIELYEYDWVGRGRFGEHENEHNAIFYN 83

Query: 77  IEIVTHLPGDDLDVQARFIEATFTINTQTL-RIGNLYLPHGNPITSTKYDDKISWIKRFL 135
            + +T        +              +  RI      H      + Y           
Sbjct: 84  RDELTVEENGQFWLSETPESEASVSWDSSFPRICTWARFHHRRSGKSFYLYNTHLDHHSQ 143

Query: 136 RFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAI 195
               + +++    +               +   +  +        +     +  G TDA 
Sbjct: 144 EAKDRGIQVIGEYMAKQRALDGLPALLTGDFNSYPGEFPIRFLRGEIEIDGKKSGLTDAY 203

Query: 196 RATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHT 255
               +   L +F  +       + G  ID+I  + E      S +ID        PSDH 
Sbjct: 204 SQIAENPGL-TFHSFKGG----DSGEPIDYIFATAEF--QFLSVQIDRSQVNGRYPSDHY 256

Query: 256 PVIV 259
           PV+ 
Sbjct: 257 PVVA 260


>gi|49083150|gb|AAT50960.1| PA5488 [synthetic construct]
          Length = 293

 Score = 48.2 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/290 (11%), Positives = 72/290 (24%), Gaps = 67/290 (23%)

Query: 4   VTVATWNVN-SI---------------------RA-RIHNLAAWIKENNPDIICLQETKT 40
           + + ++N+   I                     RA  +  +   +   + D++ LQE   
Sbjct: 35  LRLLSFNIQVGISTERYRHYLTRGWQHLLPHAGRATNLKRIGELLA--DYDLVALQE--- 89

Query: 41  EDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT 100
                                      +      Q   +           Q         
Sbjct: 90  ----------------------ADGGSLRSGYVNQVEHLAQLGAFPYWYQQLNRNLGRIA 127

Query: 101 INTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP 160
            ++  L          +         + +   RF   A   + +   L            
Sbjct: 128 QHSNGLLSRWRPTLLEDHPLPGP-PGRGAIFVRFGEGADALVVVMMHLALGARTRTRQLA 186

Query: 161 HDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG 220
           +       + +          +   L+N    D            +F  +      +N  
Sbjct: 187 YIRELIGDYRHQVLMGDMNTHAVDLLENSPLRDLGLMAPQVEA--TFPSWRP---QRN-- 239

Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQ 270
             +DHI+LS +    L    +  +P      SDH PV V + +P+  + +
Sbjct: 240 --LDHILLSSDLA--LERVDVLDQP-----ISDHLPVSVEIRLPDNLRDK 280


>gi|15010430|gb|AAK77263.1| GH03753p [Drosophila melanogaster]
          Length = 888

 Score = 48.2 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 73/259 (28%), Gaps = 40/259 (15%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           M+ + ++ WN N +      L  +I E N D++ L ET   +KN          Y     
Sbjct: 1   MASLRISLWNANGVSRHTQELTQFIYEKNIDVMLLSETHLTNKN----NFHIPGYLFYGT 56

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
                             I  H   +      +       +N  +  +  +Y P   PI+
Sbjct: 57  NHPDGKAHGGTGILIRNRIKHHHLNNFDKNYLQSTSIALQLNNGSTTLAAVYCPPRFPIS 116

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             ++                   L +  I AGDYN                         
Sbjct: 117 EDQF-------------MEFFNTLGDRFIAAGDYNAKHTHWGSRLVTPKGK--------- 154

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
               +L N       +  + +    ++W     +  +     ID   ++      + +A 
Sbjct: 155 ----QLYNALTKPENKLDYVSPGKPTYWP----ADPRKIPDLID-FAITKHVPRNMVTAE 205

Query: 241 IDTKPRGWTKPSDHTPVIV 259
                      SDH+PV +
Sbjct: 206 ALADLS-----SDHSPVFL 219


>gi|304382431|ref|ZP_07364930.1| AP endonuclease domain protein [Prevotella marshii DSM 16973]
 gi|304336439|gb|EFM02676.1| AP endonuclease domain protein [Prevotella marshii DSM 16973]
          Length = 362

 Score = 48.2 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/248 (16%), Positives = 74/248 (29%), Gaps = 25/248 (10%)

Query: 21  LAAWIKENNPDIICLQE--TKTEDKNFPFETLQSL-NYHIETCGQKSYNGVAILSKYQPI 77
           +A  I + NPDI+CLQE   K      P + +  L   +            + L+ +   
Sbjct: 123 IADDIIKANPDILCLQEASLKFP---IPSDVMHRLKKQYAYCDTTYKGRDGSCLALFSKF 179

Query: 78  EIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF 137
            I++        +    +     I+  T+ + N +        + + + K         +
Sbjct: 180 PILSRKQIRYKSIYNMSMAYMLNIHGDTVIVINNHFEGTGLTLNERREFKRMLKGELKAY 239

Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA 197
            +++         A          D     +  N     +          +   T     
Sbjct: 240 MARKESQRLIDRLATSTATRAPQADSVAAFVKANKRHSIILCGDFNDNPLSYTRTTLGDV 299

Query: 198 THDTH------HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP 251
             D +         S+ D           +RID+IM S E        ++D K     K 
Sbjct: 300 LTDCYIATGNGPGISYHDNRMY-------VRIDNIMCSDEWIPYA--CKVDNKM----KH 346

Query: 252 SDHTPVIV 259
           SDH P+  
Sbjct: 347 SDHYPIYC 354


>gi|281341958|gb|EFB17542.1| hypothetical protein PANDA_012468 [Ailuropoda melanoleuca]
          Length = 130

 Score = 48.2 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 36/104 (34%), Gaps = 12/104 (11%)

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
           E +     L  +   D  R  H     YSF+     ++S     RIDH +      S   
Sbjct: 24  ESKALNAILDELDLIDIYRTLHPRTKEYSFYSNAHGTFS-----RIDHALGHKTGLSQYQ 78

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
              I          SDH  + + L+     K  ++S +  ++ I
Sbjct: 79  KIEIIPCI-----FSDHNALKLELN--HKEKPGRNSNTWRLRTI 115


>gi|242825331|ref|XP_002488418.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
 gi|218712236|gb|EED11662.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
          Length = 1110

 Score = 48.2 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 20/56 (35%), Gaps = 3/56 (5%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278
           ID +  S    + + S   DTKP  W    DH P+    D+   R         N 
Sbjct: 181 IDLVWASHNLANRVVSC--DTKPEWWYGA-DHVPISTQFDLTAIRVPPLVRKQWNA 233


>gi|242775759|ref|XP_002478704.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
 gi|218722323|gb|EED21741.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
          Length = 1181

 Score = 48.2 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 20/56 (35%), Gaps = 3/56 (5%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278
           ID +  S    + + S   DTKP  W    DH P+    D+   R         N 
Sbjct: 181 IDLVWASHNLANRVVSC--DTKPEWWYGA-DHVPISTQFDLTAIRVPPLVRKQWNA 233


>gi|194208445|ref|XP_001501284.2| PREDICTED: similar to CCR4 carbon catabolite repression 4-like
           [Equus caballus]
          Length = 450

 Score = 48.2 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/263 (14%), Positives = 65/263 (24%), Gaps = 28/263 (10%)

Query: 21  LAAWIKENNPDIICLQETKTEDKNFPFE--TLQSLNYHIETCGQKSYNGVAILSKYQPIE 78
           +   I    PDI+CLQE    D  F      L  L Y      +         S    +E
Sbjct: 198 ILEEILAYQPDILCLQEV---DHYFDTFQPLLSRLGYQGTFFPKP-------WSPCLDVE 247

Query: 79  IVTHLPGD--DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
                 G           +  +  I    + +    +     +   +   +       L+
Sbjct: 248 HNNGPDGCALFFLQNRFKLVNSANIRLTAMTLKTNQVAIAQTLECKESSRQFCIAVTHLK 307

Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN----MGFT 192
             +               N+         P+I   D               +        
Sbjct: 308 ARTGWERFRSAQGCDLLQNLQNITQGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAY 367

Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP------EATSLLHSARIDTKPR 246
             + A   +   Y+ W        ++    +D+I  S        A  LL   +I     
Sbjct: 368 KLLSADGQSEPPYTTWKIRTSGECRHT---LDYIWYSKHALSVRSALDLLTEEQIGPNRL 424

Query: 247 -GWTKPSDHTPVIVSLDIPEPRK 268
             +  PSDH  ++      E   
Sbjct: 425 PSFNYPSDHLSLVCDFSFNEEPD 447


>gi|308813644|ref|XP_003084128.1| exodeoxyribonuclease (ISS) [Ostreococcus tauri]
 gi|116056011|emb|CAL58544.1| exodeoxyribonuclease (ISS) [Ostreococcus tauri]
          Length = 1557

 Score = 48.2 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 43/136 (31%), Gaps = 16/136 (11%)

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY-NPIIWENDACFTLEVRQS 182
             ++    +R +R     L+  +P+I+ GD N+  +  D +         A FT E R +
Sbjct: 99  LRERTETWERAMRAHLCELKKAKPVIYCGDLNVAHEEIDLWGRHKENAKSAGFTPEERSA 158

Query: 183 FQKL-QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
              L       D+ R  H     Y+                      +      +  A I
Sbjct: 159 MSTLLSECELVDSFRHKHPDKRAYT--SIADGDSIT--------FSSTRRLADSIVDAEI 208

Query: 242 DTKPRGWTKPSDHTPV 257
                G    SDH PV
Sbjct: 209 YPDVTG----SDHCPV 220


>gi|56460629|ref|YP_155910.1| extracellular nuclease [Idiomarina loihiensis L2TR]
 gi|56179639|gb|AAV82361.1| Extracellular nuclease [Idiomarina loihiensis L2TR]
          Length = 589

 Score = 48.2 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/310 (11%), Positives = 78/310 (25%), Gaps = 67/310 (21%)

Query: 4   VTVATWNV------NSI-------RAR---------IHNLAAWIKENNPDIICLQETKTE 41
           + +A++NV      N +       R              + A +   + D+I L E   E
Sbjct: 288 LRIASFNVLNFFNGNGVGQGFPTPRGADTPEQMQRQQKKIVAALTAIDADVIGLMEI--E 345

Query: 42  DKNF-----------PFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDV 90
           +  F             E     +Y I     +      I +    + I+        + 
Sbjct: 346 NDGFGERSAIMQLVKALEKASGKDYAIAEPRAEK-----IGTDQITVGIIYQPQRVKPNS 400

Query: 91  QARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIF 150
            A F             +   ++        +   +           +      +     
Sbjct: 401 HAIFTRQGPFSWGSRPPLAQSFIDANTGKEFSVVVNHFKSKGSCPEDSESPNSNQNDGQA 460

Query: 151 AGD--YNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF- 207
             +       +    +       ++    +    +Q+     F D           YS+ 
Sbjct: 461 CWNDLRLQSSRELIQWIQSESLANSVLLGDFNAYYQEDPVRYFADNGFYNPSGAKDYSYV 520

Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID---------TKPR-------GWTKP 251
           +D  A +        +DH+ ++      +                  R       G  + 
Sbjct: 521 YDSQAGA--------LDHVFVTDSLKDAIQEVYHLPFNADEPQLYDYRDEAYFAEGPFRS 572

Query: 252 SDHTPVIVSL 261
           SDH P+++ L
Sbjct: 573 SDHDPLVLDL 582


>gi|327395006|dbj|BAK12428.1| endonuclease/exonuclease/phosphatase [Pantoea ananatis AJ13355]
          Length = 371

 Score = 48.2 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 32/112 (28%), Gaps = 26/112 (23%)

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY--SFWDYYADSWSKNKGIRIDHIML 228
            D   T +       L+     D        +  Y  ++        + NK   ID+I+L
Sbjct: 267 GDFNDTPDSEALAPLLKETDLKDIFTHEKFDNGGYPGTW----GGCSASNK---IDYILL 319

Query: 229 SPEATSLLHSARIDTKPR-------GWTK----------PSDHTPVIVSLDI 263
           SP     +    +  K          W             SDH  V V L I
Sbjct: 320 SPALWKKVEKGGVWRKGMWPGVRPVKWETYPELKKEVNAASDHAAVWVDLKI 371


>gi|291618627|ref|YP_003521369.1| Hypothetical Protein PANA_3074 [Pantoea ananatis LMG 20103]
 gi|291153657|gb|ADD78241.1| Hypothetical Protein PANA_3074 [Pantoea ananatis LMG 20103]
          Length = 371

 Score = 48.2 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 32/112 (28%), Gaps = 26/112 (23%)

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY--SFWDYYADSWSKNKGIRIDHIML 228
            D   T +       L+     D        +  Y  ++        + NK   ID+I+L
Sbjct: 267 GDFNDTPDSEALAPLLKETDLKDIFTHEKFDNGGYPGTW----GGCSASNK---IDYILL 319

Query: 229 SPEATSLLHSARIDTKPR-------GWTK----------PSDHTPVIVSLDI 263
           SP     +    +  K          W             SDH  V V L I
Sbjct: 320 SPALWKKVEKGGVWRKGMWPGVRPVKWETYPELKKEVNAASDHAAVWVDLKI 371


>gi|224026812|ref|ZP_03645178.1| hypothetical protein BACCOPRO_03569 [Bacteroides coprophilus DSM
           18228]
 gi|224020048|gb|EEF78046.1| hypothetical protein BACCOPRO_03569 [Bacteroides coprophilus DSM
           18228]
          Length = 288

 Score = 48.2 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/267 (13%), Positives = 76/267 (28%), Gaps = 23/267 (8%)

Query: 7   ATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57
           AT+N+         N+ + R   +AA+IK N  DI+ +QE            L+ L   +
Sbjct: 33  ATFNIRYDNPADSLNNWKYRKDTVAAFIKANQLDIVGMQEV-------LHNQLEDLKQRL 85

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
               +         ++ +   +       +      F   +   ++      +       
Sbjct: 86  PEYAEVGVGREDGKTQGEYAPLFYRKDRFEALDSNTF-WLSQYPDSVGFIGWDGACTRIA 144

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
                K                                 I +       ++  +      
Sbjct: 145 TWAKLKDRKTGKIFMAVNTHFDHIGVEARKNSALLIIQKIKEIVGDQPAVLTGDFNVSDQ 204

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHH-LYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
               +     +    DA +         Y+F D        +K  +ID I ++P+    +
Sbjct: 205 WDAYTTITTNSFVLKDAYKIADKQEGVNYTFHD--FGREPIDKREKIDFIFVTPQI--KV 260

Query: 237 HSARIDTKPRGWTKP-SDHTPVIVSLD 262
               I  + +G T   SDH P + +L+
Sbjct: 261 KDTSIPQESQGETGFLSDHNPQLATLE 287


>gi|219112079|ref|XP_002177791.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217410676|gb|EEC50605.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 580

 Score = 48.2 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 27/89 (30%), Gaps = 26/89 (29%)

Query: 4  VTVATWNVNSIRA---RIH------------------NLAAWIKENNPDIICLQETKTED 42
          + + +WNV  +     RIH                   LA +++ +  DI CLQE K   
Sbjct: 1  MLILSWNVAGLSTTVNRIHSSYDSPAPKGTKRQPTSAALARFLELHGADIACLQEHKIPK 60

Query: 43 KNF-----PFETLQSLNYHIETCGQKSYN 66
          +       P        Y          N
Sbjct: 61 QQLSSKSEPRHCSNVTGYESFWSCCVDNN 89



 Score = 44.0 bits (102), Expect = 0.023,   Method: Composition-based stats.
 Identities = 10/65 (15%), Positives = 23/65 (35%), Gaps = 1/65 (1%)

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDT-HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
              +     LQ+    D  R    +    ++ W+   +    N G RID+ ++     + 
Sbjct: 338 PTRKWLSTVLQDDDMVDVFRYHFPSAEARFTCWNQSLNRRYFNDGSRIDYTIVDRCLMNR 397

Query: 236 LHSAR 240
           +  + 
Sbjct: 398 VADSE 402


>gi|290971386|ref|XP_002668488.1| predicted protein [Naegleria gruberi]
 gi|284081918|gb|EFC35744.1| predicted protein [Naegleria gruberi]
          Length = 174

 Score = 48.2 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 3/41 (7%)

Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
           RID+++ + E    L  + ID+   G    SDH PV+V  +
Sbjct: 136 RIDYVISNTELEPYLKQSWIDSDASGI---SDHLPVVVLFE 173


>gi|260173227|ref|ZP_05759639.1| Endonuclease/exonuclease/phosphatase [Bacteroides sp. D2]
 gi|315921500|ref|ZP_07917740.1| metallophosphoesterase [Bacteroides sp. D2]
 gi|313695375|gb|EFS32210.1| metallophosphoesterase [Bacteroides sp. D2]
          Length = 263

 Score = 48.2 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/271 (14%), Positives = 73/271 (26%), Gaps = 56/271 (20%)

Query: 4   VTVATWNVNSIR----ARIHNLAAWIKENNPDIICLQET------KTEDKNFPFETLQSL 53
           V V T+N   +R    A +  LA  IK   PD + LQE       K        + +  L
Sbjct: 27  VRVMTYN---LRFGELASLEELAHHIKSFKPDFVALQEVDSKTDRKRTPHQKGKDFISEL 83

Query: 54  NYH--IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
            YH  +     K+ +          +    ++    + +     E       + L     
Sbjct: 84  AYHTGMFGLYGKTIDYSTGYYGIGMLSKYPYISVQKIMLPHPVKEHERRAMLEGL-FEMG 142

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
                   T    + + +  ++           + P+I  GD+N             W  
Sbjct: 143 NDTIVFTSTHLDVNSQETRAEQIKFITGHFKNYKYPVILGGDFNARHYSEVIRGMDSWFA 202

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
            +     +      ++                                   ID++   P+
Sbjct: 203 ASNDDFGMPAWKPVIK-----------------------------------IDYLFAYPQ 227

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
               + S +           SDH P+I  L+
Sbjct: 228 KGWRVISTQTVQSLL-----SDHLPIITELE 253


>gi|154274920|ref|XP_001538311.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
 gi|150414751|gb|EDN10113.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
          Length = 492

 Score = 48.2 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 52/346 (15%), Positives = 90/346 (26%), Gaps = 66/346 (19%)

Query: 2   SVVTVATWNVNSIRA----RIHNLAAW-----IKENNPDIICLQETKTEDK--NFPFETL 50
           + + + T N   ++     R   L        + EN P I+ LQE  + +   N   ET 
Sbjct: 11  AKINILTLNCWGLKYISEYRRERLIEIGKRIALSENTPHIVGLQECWSREDYHNIRRETR 70

Query: 51  QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ---TLR 107
           + L Y           G+AILSK+   E   H    +    A F    +         +R
Sbjct: 71  EILPYGKFYFSGIFGGGLAILSKWPIEESTMHTYPLNGRPSAIFRGDWYVGKGVACARIR 130

Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP--------- 158
           IG       +   +  +       +            E   +                  
Sbjct: 131 IGPAAADIVDVFCTHLHAPYEREPRDSYICHRTAQAWEIAKLMKAAAEKGHLVVGLGDFN 190

Query: 159 -----------------QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT 201
                            +    Y        A          + + +  F  +       
Sbjct: 191 MLPQSFAHRLITSHAPVKDVWGYLHPDSSIGAAIDSAEMNRKKPVPSADFNISENGATCD 250

Query: 202 HHLYSF-WDYYADSWSKNKG-------------IRIDHIML-------SPEATSL-LHSA 239
             L ++ W        K +G              R+D+I +        P      + SA
Sbjct: 251 SILNTWRWSKSQQKRLKREGPMPVDGQRPDPLAKRLDYIFVGDGSFSNPPPLRKWDIESA 310

Query: 240 RI---DTKPRGWTKPSDHTPVIVSLDIP-EPRKKQQDSTSQNMKPI 281
           R+   +  P      SDH  V  ++ +         D    +  PI
Sbjct: 311 RVCMLERHPHLHCSLSDHFGVEATIKLDIAKEADDGDEGPSSFLPI 356


>gi|18310037|ref|NP_561971.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens str. 13]
 gi|18144716|dbj|BAB80761.1| hypothetical protein [Clostridium perfringens str. 13]
          Length = 256

 Score = 48.2 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/249 (16%), Positives = 70/249 (28%), Gaps = 21/249 (8%)

Query: 20  NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEI 79
            +   IK++ PDII  QE      +   + L   ++ +    + +         +   + 
Sbjct: 23  RITKLIKDHLPDIIGTQEGLIHMLDDMDDLLDEYSW-VGEDREGNGKDEFNAIFFLNNKF 81

Query: 80  VTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIK-----RF 134
                      +   I+ +   N+   RI                             R 
Sbjct: 82  EVLEWDQFWLSKTPNIKGSKDFNSSLPRICTKLKLKDKISGLKIDIYNTHLDHESELARE 141

Query: 135 LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDA 194
                   E+++         II    +CY      N           F    +    + 
Sbjct: 142 EGIKIILKEVKKNYSIEKTPYIIMGDFNCYLEDNLFNIIREEETNNTCFNVCYDNIKNNI 201

Query: 195 IRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDH 254
           +   H     Y             +G  ID+I+ S E    + S  ID +      PSDH
Sbjct: 202 LGTFHYFKGGY-------------EGKIIDYILYSKEYE--IKSLNIDDRKIDGGYPSDH 246

Query: 255 TPVIVSLDI 263
            PVI  L++
Sbjct: 247 YPVICELEL 255


>gi|308458017|ref|XP_003091362.1| hypothetical protein CRE_16479 [Caenorhabditis remanei]
 gi|308257153|gb|EFP01106.1| hypothetical protein CRE_16479 [Caenorhabditis remanei]
          Length = 925

 Score = 48.2 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 44/280 (15%), Positives = 91/280 (32%), Gaps = 25/280 (8%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENN---PDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           + + T+N  S+ A  + LA  ++E N    DII L ETK   +             +   
Sbjct: 21  LRICTFNCRSV-ATDNRLAELLEETNRIKYDIIGLSETKRSAE---VHMTNRDGTRVI-L 75

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           G+++ + V+    +   + +     +   V  R    T  +N     I   Y P  +   
Sbjct: 76  GKRNDSSVSGGVGFIINKSLMPKIKEIKIVSHRIGYLTLQVNKNQYTIIQGYAPTADYEE 135

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
               +   +    +    S+   +              +     + +   ND+    E R
Sbjct: 136 EDHSNFYENLEDVYKSCKSRYKMVIGDFNARIGERKGNEVFIGPHSMENRNDS----EER 191

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            +     N  F    +    TH  +++         +     +DHI+ +      +    
Sbjct: 192 LATFCEVNRVFHMNSQFIKPTHRRWTYISPDKQHRHE-----LDHILANG---KYITDVS 243

Query: 241 IDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
           +      +T  SDH  +  ++ I   + K +    +  KP
Sbjct: 244 V---VPSFTNGSDHRMLRANVHINAKQAKFEQV--KRRKP 278


>gi|302761446|ref|XP_002964145.1| hypothetical protein SELMODRAFT_405855 [Selaginella moellendorffii]
 gi|300167874|gb|EFJ34478.1| hypothetical protein SELMODRAFT_405855 [Selaginella moellendorffii]
          Length = 589

 Score = 48.2 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 31/99 (31%)

Query: 139 SQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT 198
            + L+    +I  G  NI P P D  +P    +        R                  
Sbjct: 267 CRILKRGRRIIIVGHLNISPYPIDSCDPGPKFDTDPSRQWFRSLLVSEGGAFSDSFRVFH 326

Query: 199 HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
            +    Y+ W   + +   N G RIDH++++        
Sbjct: 327 PEIAEAYTCWSQASGAEEFNYGSRIDHVLIAGPCAGHCQ 365


>gi|222086336|ref|YP_002544869.1| endonuclease/exonuclease/phosphatase family protein [Agrobacterium
           radiobacter K84]
 gi|221723784|gb|ACM26940.1| endonuclease/exonuclease/phosphatase family protein [Agrobacterium
           radiobacter K84]
          Length = 370

 Score = 48.2 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 49/310 (15%), Positives = 91/310 (29%), Gaps = 77/310 (24%)

Query: 25  IKENNPDIICLQETKTEDKNFPFETLQSLNY-----------------------HIETCG 61
           I + N DIICLQE    D     +  +   Y                        +    
Sbjct: 66  IADANADIICLQEV---DSMAALQAFE-YGYLYRMVGNGYRQKFLIEGNDSRGIDVAVMM 121

Query: 62  QKSYNG---VAILSKYQPIEIVT-------------HLPGDDLDVQARFIEATFTINTQT 105
           ++  +    + +        +                L  DD   +   +E   TI    
Sbjct: 122 REQTSDGQPIVLKDIKSHAMVTYRDFDLFTDELAALGLHEDDKIFKRDCLELDLTIGGVP 181

Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELE----------EPLIFAGDYN 155
             +  ++L    P        + +   R     + R  +E          +     GD N
Sbjct: 182 FSLYVVHLKSMGPAREGVDGRQSTMPVRRAETLAVRHIIETRFGAGHTAAKNFAICGDMN 241

Query: 156 IIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW 215
              +  D               E   +     + GF + +    D    ++   Y+A   
Sbjct: 242 DYQERVDVIGTRHTGYRFEHRDEEASALDVFSHDGFVENVMRRRDELDRWTL--YHARGP 299

Query: 216 SKNKGIRIDHIMLSPEAT--------SLLHSA-----------RIDTKPR-GWTKP--SD 253
            +    ++D+I LSP            ++ S             ++  PR GW +P  SD
Sbjct: 300 QEQWLCQLDYIWLSPALARANAARLPDVVRSGQPFRTIFPPGQEVERYPRTGWDRPKASD 359

Query: 254 HTPVIVSLDI 263
           H P++++LD+
Sbjct: 360 HCPIVMTLDL 369


>gi|166367334|ref|YP_001659607.1| hypothetical protein MAE_45930 [Microcystis aeruginosa NIES-843]
 gi|166089707|dbj|BAG04415.1| hypothetical protein MAE_45930 [Microcystis aeruginosa NIES-843]
          Length = 260

 Score = 48.2 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 49/277 (17%), Positives = 81/277 (29%), Gaps = 33/277 (11%)

Query: 4   VTV--ATWNV----------NSIRARIHNLAAWIKENNPDIICLQETKTE---DKNFPFE 48
           + +   ++N+          N  R R   +AA I   +PDII  QE +     D +    
Sbjct: 1   MKLTAMSFNIRYDKPDPDEGN-WRVRREAVAALIAHYSPDIIGTQEARANQLLDLHRLLP 59

Query: 49  TLQSLNYHIETCGQKSYNGVAIL-SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107
             QSL       G   +  +    S+ + +EI      +  DV     EA      + + 
Sbjct: 60  KYQSLGSDRRRTGLDEHCAILYQPSRLKCLEIYEFWLSETPDVIGSITEAWGNPYPRMVT 119

Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167
                   G  +            +     A    E    L    DY  +    +  +  
Sbjct: 120 GAKFRTLEGQTLQFYNTHLDYYSDQAKDLGAKCIQERFCQLDLTKDYLFLTGDFNVNSQQ 179

Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227
           +        L+     +            + +     Y+   Y A          ID I 
Sbjct: 180 LPRQILTQPLQPEIKLKDALADLELAEQMSFN----NYTDTPYLA----------IDTIY 225

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
                   L  A++D        PSDH PVI +  +P
Sbjct: 226 YDSRL--QLDWAKVDPSRWLNLIPSDHYPVIAAFTLP 260


>gi|46109934|ref|XP_382025.1| hypothetical protein FG01849.1 [Gibberella zeae PH-1]
          Length = 298

 Score = 48.2 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/285 (12%), Positives = 79/285 (27%), Gaps = 38/285 (13%)

Query: 4   VTVATWNVNSIRARIHNLAA----WIKE---------------NNPDIICLQETKTEDKN 44
           + + T+NV   R            W +                 +P  ICLQE       
Sbjct: 25  LRIVTFNV---RYATKKFEKNERPWAERRPKLINQLNFITAGHESP-FICLQE--CLFHQ 78

Query: 45  FPFETLQSLN--YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN 102
              E  + L   +     G+ +       S     + +      ++   ++  E      
Sbjct: 79  V-NEIQEDLGSKWQHIGRGRGTKPEDGEFSPIFYRDDIWKNVRSEVRWLSKTPEKPSRGW 137

Query: 103 TQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD 162
              L    + +       +       S     +   +++   +  + FA ++      + 
Sbjct: 138 DAVLN-RIVTMAEFEHRVTATRVVVFSTHFDHIGVEARQNSAKLLVKFAREWGQA--GNK 194

Query: 163 CYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY---SFWDYYADSWSKNK 219
             + ++   D     +                +         Y   + +  +  +W    
Sbjct: 195 KASAVLIGGDFNSEPDDGAYKTITAPGSGISDVSDLVPKEKRYGNETTYTSFGGTWPT-- 252

Query: 220 GIRIDHIMLSPEATSLLHSARIDTKPRG-WTKPSDHTPVIVSLDI 263
             RID + +    T+ + +  +         + SDH PV+  LDI
Sbjct: 253 -SRIDFLFIQEPRTATVQTFGVLANSFDDGVRISDHRPVVSDLDI 296


>gi|281351494|gb|EFB27078.1| hypothetical protein PANDA_003930 [Ailuropoda melanoleuca]
          Length = 126

 Score = 48.2 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 36/104 (34%), Gaps = 12/104 (11%)

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
           E +     L  +   D  R  H     YSF+     ++S     RIDH +      S   
Sbjct: 20  ESKALNAILDELDLIDIYRTLHPRTKEYSFYSNAHGTFS-----RIDHALGHKTGLSQYQ 74

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
              I          SDH  + + L+     K  ++S +  ++ I
Sbjct: 75  KIEIIPCI-----FSDHNALKLELN--HKEKPGRNSNTWRLRTI 111


>gi|281341454|gb|EFB17038.1| hypothetical protein PANDA_019334 [Ailuropoda melanoleuca]
 gi|281341456|gb|EFB17040.1| hypothetical protein PANDA_019336 [Ailuropoda melanoleuca]
 gi|281344570|gb|EFB20154.1| hypothetical protein PANDA_016448 [Ailuropoda melanoleuca]
 gi|281352810|gb|EFB28394.1| hypothetical protein PANDA_010376 [Ailuropoda melanoleuca]
 gi|281353180|gb|EFB28764.1| hypothetical protein PANDA_014303 [Ailuropoda melanoleuca]
 gi|281354095|gb|EFB29679.1| hypothetical protein PANDA_017539 [Ailuropoda melanoleuca]
          Length = 126

 Score = 48.2 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 36/104 (34%), Gaps = 12/104 (11%)

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
           E +     L  +   D  R  H     YSF+     ++S     RIDH +      S   
Sbjct: 20  ESKALNAILDELDLIDIYRTLHPRTKEYSFYSNAHGTFS-----RIDHALGHKTGLSQYQ 74

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
              I          SDH  + + L+     K  ++S +  ++ I
Sbjct: 75  KIEIIPCI-----FSDHNALKLELN--HKEKPGRNSNTWRLRTI 111


>gi|224045985|ref|XP_002194287.1| PREDICTED: hypothetical protein [Taeniopygia guttata]
          Length = 311

 Score = 48.2 bits (113), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/273 (13%), Positives = 75/273 (27%), Gaps = 43/273 (15%)

Query: 6   VATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           + TWN++ +       RAR   +  ++   +PD++ LQE      + P   +++ NY I 
Sbjct: 65  LITWNIDGLDLGNVKDRAR--GICTYLALYSPDVVFLQEV--IPPHLPLLQMKAGNYTII 120

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
                 Y             ++       L         T  +    L +          
Sbjct: 121 PGNIDEY----------FTAVMLKKSRVKLLKHDIIPFPTTAMKRNLLVVHVSISGIELC 170

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
           + ++  +   +  K  ++         +    +                I+  D      
Sbjct: 171 LMTSHLESTKNHSKERIKQLQIVFNEMQKESESTTV-------------IFGGDTNLRDS 217

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK---NKGIRIDHIMLSPE---- 231
                  L +             H  Y+ WD  +++         +R D I   P     
Sbjct: 218 EVTKLGNLPDNIKDAWEFLGKPQHCRYT-WDTQSNTNLNAAYKCKMRFDRIYFRPAVEGG 276

Query: 232 -ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                        K      PSDH  ++ + D+
Sbjct: 277 HFIPRSMDLIGLEKLECGRFPSDHWGILCNFDV 309


>gi|308095136|ref|ZP_07663177.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus
           Peru-466]
 gi|308089221|gb|EFO38916.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus
           Peru-466]
          Length = 434

 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/283 (14%), Positives = 80/283 (28%), Gaps = 43/283 (15%)

Query: 4   VTVATWNVNSIRA-------RIHNLAAWIKENNPDIICLQETKTE-DKNFPFETLQSLNY 55
           + + T+N+ ++ A       R   +  ++K    D++  QE        F  E  +   Y
Sbjct: 170 LKLMTYNIWALPAIASHIGDRYELIPDYVK--GYDVLAFQEVFASGRDAFLRELAKEYPY 227

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
             +   +  +N             + +         +               I      H
Sbjct: 228 QTKMLDKDGFNVYDGGVIIVSRYPIVNEAQYVFPDCSGTDCFADKGVNYAEIIKGGQAYH 287

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
                +  +D   +   R  +F   R         A   NI       Y+     N    
Sbjct: 288 VFATHTASFDTDTAREYRQRQFQQMR-------TMAQSLNIPNNETVVYSGDFNVNK--- 337

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYS--FWDYYADSWS-------KNKGIRIDHI 226
                              + A    +  Y+   +D   ++++       +N    +D++
Sbjct: 338 ------LKFPGDYQQMIANLSAMEPQYSGYTASTFDPRINNFAGEALSGGENVEY-LDYV 390

Query: 227 MLSPEA-TSLLHSARID---TKPRGWTKP---SDHTPVIVSLD 262
           M+S E      +  R+D   +   G  K    SDH PV   + 
Sbjct: 391 MVSNEYGVKSFNDNRVDVPRSTAEGLWKHYNLSDHFPVSAVIK 433


>gi|153832821|ref|ZP_01985488.1| metal-dependent hydrolase [Vibrio harveyi HY01]
 gi|148870955|gb|EDL69845.1| metal-dependent hydrolase [Vibrio harveyi HY01]
          Length = 287

 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 41/290 (14%), Positives = 79/290 (27%), Gaps = 54/290 (18%)

Query: 2   SVVTVATWNV-----NSIR-ARIHN----LAAWIKENNPDIICLQET-------KTEDKN 44
           + V + +WN+     +  + +R       L  ++ +   DI+  QE        K    +
Sbjct: 20  NSVNLTSWNIEWLSIDGGKVSRTPQDFEKLNHYVDKTQADILAFQEVESAAAVQKAVGND 79

Query: 45  F-----PFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDD--LDVQARFIEA 97
           F           + +       Q +   V            +   G+          +  
Sbjct: 80  FTIYLSDRSNASNRHLQFNDTNQYTGFAVRNGVSVLDKPDFSITRGNSKLRFASYLVLNP 139

Query: 98  TFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII 157
                T  L +       G    +          +   ++   R   ++  +  GD+N  
Sbjct: 140 DQDNETHLLSVHLKAGCSGAYRNNRDCKIVKQQGQALAKWIKARENNKQQYVVLGDFN-- 197

Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK 217
              H+      W  D        +   K                 H +            
Sbjct: 198 ---HNLGYRGDWLWDVLSDNTDAKLVTKNTKAECKVRSNRNPKKTHQF------------ 242

Query: 218 NKGIR--IDHIMLSPEATSLLHSARIDTKPRGWT----KPSDHTPVIVSL 261
               R  IDHI++S +  +   S+ + T  +       K SDH PV  +L
Sbjct: 243 ----RSVIDHIIVSGDLKA---SSGVQTVFKTQDVLDYKLSDHCPVSTTL 285


>gi|293376599|ref|ZP_06622827.1| endonuclease/exonuclease/phosphatase family protein [Turicibacter
           sanguinis PC909]
 gi|325839419|ref|ZP_08166858.1| endonuclease/exonuclease/phosphatase family protein [Turicibacter
           sp. HGF1]
 gi|292644825|gb|EFF62907.1| endonuclease/exonuclease/phosphatase family protein [Turicibacter
           sanguinis PC909]
 gi|325490539|gb|EGC92855.1| endonuclease/exonuclease/phosphatase family protein [Turicibacter
           sp. HGF1]
          Length = 262

 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 42/280 (15%), Positives = 75/280 (26%), Gaps = 38/280 (13%)

Query: 4   VTVATWNVNSIRAR--------IHNLAAWIKENNPDIICLQETKTEDKNF----PFETLQ 51
           + + T N +   A         I  LA  IKE   D+I LQE                ++
Sbjct: 1   MKLLTLNCH---AWQEENQVEKIKYLAQVIKEKQYDVIALQEV----SQLINPNDENKVK 53

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
           + NY +    +        ++ YQ I   +H+  D  +     +         +  +   
Sbjct: 54  ADNYAVVLLSELMK---LGITDYQFIWDFSHIGFDVYEEGLAILTRYHIERAHSFVVTQA 110

Query: 112 YLPHGNPITS--------TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                                   +          ++     +        N   +    
Sbjct: 111 NDVTNYRTRRIVAIDFISNNQPVSVYSCHLGWFHDTEEPFTGQVDELVSRLN---KERLN 167

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223
                + NDA  + E       L + G  D            +            KG+RI
Sbjct: 168 IVVGDFNNDANLSGEGYD---YLLSKGLLDTYHLALKKDEGTTVAGKIDGWEENKKGLRI 224

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           D ++        + S+ +          SDH  V V L+I
Sbjct: 225 DLVLSDKPV--NVLSSHVIFNGSHKDIVSDHFGVEVELNI 262


>gi|294508891|ref|YP_003572950.1| endonuclease/exonuclease/phosphatase family [Salinibacter ruber M8]
 gi|294345220|emb|CBH25998.1| endonuclease/exonuclease/phosphatase family [Salinibacter ruber M8]
          Length = 317

 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/288 (13%), Positives = 74/288 (25%), Gaps = 37/288 (12%)

Query: 4   VTVATWNV------NS-IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56
           +TV T+NV         +RA        I+  +PD++ LQE    +          L+Y+
Sbjct: 45  LTVMTYNVLYATPDTGTVRA--------IEAVDPDVVALQEI--SEPRL-RHIADELDYY 93

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                +   N        +         G  L +          ++          L   
Sbjct: 94  FHHSDEHEANEEDTGLLSRYPISRPTRYGALLYLTVDDPIRIANVHLSPYPYEPYALRDD 153

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEP-----LIFAGDYNIIPQPHDCYNPIIWEN 171
                             ++     L           +                     +
Sbjct: 154 EMTPQEAVAQARKTRSPEIKPVLDALAKSVQEDVPTFLMGDFNEPSHLDWTPAAAEAGLH 213

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL---YSFWDYYADSWSKNKGIRIDHIML 228
                       + +   GF DA R  H        Y++     D        RID I +
Sbjct: 214 LGLEVPWPT--SRAVTERGFRDAFRVAHPDEVKRPGYTWTTLTED--PDEVHDRIDFIYV 269

Query: 229 SPEATSLLHSARI-DTKPRGWTK-----PSDHTPVIVSLDI-PEPRKK 269
           +  + S+  +  +         +     PSDH  V+ ++ + P P   
Sbjct: 270 AGASVSVETAYTVGLRDASPTDRSVSGYPSDHRSVVTTVSLAPSPSDP 317


>gi|15600681|ref|NP_254175.1| hypothetical protein PA5488 [Pseudomonas aeruginosa PAO1]
 gi|107104590|ref|ZP_01368508.1| hypothetical protein PaerPA_01005669 [Pseudomonas aeruginosa PACS2]
 gi|116053638|ref|YP_793965.1| hypothetical protein PA14_72430 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218894591|ref|YP_002443461.1| putative hydrolase [Pseudomonas aeruginosa LESB58]
 gi|254237831|ref|ZP_04931154.1| hypothetical protein PACG_03928 [Pseudomonas aeruginosa C3719]
 gi|254243040|ref|ZP_04936362.1| hypothetical protein PA2G_03828 [Pseudomonas aeruginosa 2192]
 gi|296392353|ref|ZP_06881828.1| putative hydrolase [Pseudomonas aeruginosa PAb1]
 gi|313111571|ref|ZP_07797370.1| hypothetical protein PA39016_003370046 [Pseudomonas aeruginosa
           39016]
 gi|9951822|gb|AAG08873.1|AE004961_8 hypothetical protein PA5488 [Pseudomonas aeruginosa PAO1]
 gi|115588859|gb|ABJ14874.1| putative hydrolase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126169762|gb|EAZ55273.1| hypothetical protein PACG_03928 [Pseudomonas aeruginosa C3719]
 gi|126196418|gb|EAZ60481.1| hypothetical protein PA2G_03828 [Pseudomonas aeruginosa 2192]
 gi|218774820|emb|CAW30638.1| putative hydrolase [Pseudomonas aeruginosa LESB58]
 gi|310883872|gb|EFQ42466.1| hypothetical protein PA39016_003370046 [Pseudomonas aeruginosa
           39016]
          Length = 292

 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/290 (11%), Positives = 72/290 (24%), Gaps = 67/290 (23%)

Query: 4   VTVATWNVN-SI---------------------RA-RIHNLAAWIKENNPDIICLQETKT 40
           + + ++N+   I                     RA  +  +   +   + D++ LQE   
Sbjct: 35  LRLLSFNIQVGISTERYRHYLTRGWQHLLPHAGRATNLKRIGELLA--DYDLVALQE--- 89

Query: 41  EDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT 100
                                      +      Q   +           Q         
Sbjct: 90  ----------------------ADGGSLRSGYVNQVEHLAQLGAFPYWYQQLNRNLGRIA 127

Query: 101 INTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP 160
            ++  L          +         + +   RF   A   + +   L            
Sbjct: 128 QHSNGLLSRWRPTLLEDHPLPGP-PGRGAIFVRFGEGADALVVVMMHLALGARTRTRQLA 186

Query: 161 HDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG 220
           +       + +          +   L+N    D            +F  +      +N  
Sbjct: 187 YIRELIGDYRHQVLMGDMNTHAVDLLENSPLRDLGLMAPQVEA--TFPSWRP---QRN-- 239

Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQ 270
             +DHI+LS +    L    +  +P      SDH PV V + +P+  + +
Sbjct: 240 --LDHILLSSDLA--LERVDVLDQP-----ISDHLPVSVEIRLPDNLRDK 280


>gi|282859573|ref|ZP_06268677.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           bivia JCVIHMP010]
 gi|282587624|gb|EFB92825.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           bivia JCVIHMP010]
          Length = 296

 Score = 47.9 bits (112), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/289 (12%), Positives = 61/289 (21%), Gaps = 48/289 (16%)

Query: 8   TWNV-----------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56
           T+N+           N    R   L   +   +PDI  +QE             Q   Y 
Sbjct: 14  TYNIRYDAESDRSEGNGWNVRSKVLCDMMNFEDPDIFGVQE--ALINQVHDLKSQLNGYD 71

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
               G+         S     +       +     +   E               +    
Sbjct: 72  YIGVGRDDGKEAGEFSAIFYKKDKLKKLANGNFWLSETPEKPGLGWDAACIRICTWGKFE 131

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
              T  K+      +      A +                        +  + + D  + 
Sbjct: 132 EIGTKFKFYYFNLHMDHVGVVARREAAKLVIKRIKEIAGDKAPVILTGDFNVDQKDEIYK 191

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
           +       K   +                    Y           RIDHI +S E    +
Sbjct: 192 IFAESKILKDTYIAAKQRFAENG---------TYQGFKSDLYTESRIDHIFVSNEFE--V 240

Query: 237 HSARIDT------------------------KPRGWTKPSDHTPVIVSL 261
           +   I T                        +      PSDH PV+  +
Sbjct: 241 NHYGILTNGYWSKNASTNTTKEANAPQQISFEHYTHRLPSDHYPVLAKI 289


>gi|297293391|ref|XP_002804251.1| PREDICTED: nocturnin-like [Macaca mulatta]
          Length = 431

 Score = 47.9 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/263 (14%), Positives = 65/263 (24%), Gaps = 28/263 (10%)

Query: 21  LAAWIKENNPDIICLQETKTEDKNFPFE--TLQSLNYHIETCGQKSYNGVAILSKYQPIE 78
           +   I    PDI+CLQE    D  F      L  L Y      +         S    +E
Sbjct: 179 ILEEILAYQPDILCLQEV---DHYFDTFQPLLSRLGYQGTFFPKP-------WSPCLDVE 228

Query: 79  IVTHLPGD--DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
                 G           +  +  I    + +    +     +   +   +       L+
Sbjct: 229 HNNGPDGCALFFLQNRFKLVNSANIRLTAMTLKTNQVAIAQTLECKESGRQFCIAVTHLK 288

Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN----MGFT 192
             +               N+         P+I   D               +        
Sbjct: 289 ARTGWERFRSAQGCDLLQNLQNITQGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAY 348

Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP------EATSLLHSARIDTKPR 246
             + A   +   Y+ W        ++    +D+I  S        A  LL   +I     
Sbjct: 349 KLLSADGQSEPPYTTWKIRTSGECRHT---LDYIWYSKHALNVRSALDLLTEEQIGPNRL 405

Query: 247 -GWTKPSDHTPVIVSLDIPEPRK 268
             +  PSDH  ++      E   
Sbjct: 406 PSFNYPSDHLSLVCDFSFTEEPD 428


>gi|322696463|gb|EFY88255.1| exonuclease III [Metarhizium acridum CQMa 102]
          Length = 522

 Score = 47.9 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/293 (11%), Positives = 78/293 (26%), Gaps = 40/293 (13%)

Query: 2   SVVTVATWNVN-SIRARI----HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56
             + V T N+    R  I      + +++   + D++ LQE+   D        ++L ++
Sbjct: 239 RSIRVLTLNLWLGGRNVIDYHNKQV-SFLASQDVDVVALQESYFHDG---LRLAKALGWN 294

Query: 57  IETCGQKSYNGVAILSKYQPIEIVT-------------HLPGDDLDVQARFIEATFTINT 103
                      V+ILS+Y    +                     L        A +    
Sbjct: 295 A-----WQSKDVSILSRYPIGRVYREIEAGGTVRIDLDGSDRQLLVWNVHLNNAPYGPYD 349

Query: 104 QTL--RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161
                   N            +   +I    +  +      +    ++     +     +
Sbjct: 350 LCFTNYSTNYIQRREEWARRVQQVYEIVHRLKEYKVRKPEFQELPQILAGDFSSPSHLDY 409

Query: 162 DCYNPIIWEN---DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN 218
           +     +      D       R++    +       +          ++      +  + 
Sbjct: 410 NKKTRDLHCKGREDPFPWPVSRRTVLDGKWTDSFREVYRNAWKVPGNTWSPIRKVNGDRP 469

Query: 219 KGI-RIDHIMLSPEATSLLHSARIDTKPR------GWTKPSDHTPVIVSLDIP 264
           + + RID I    +  +L     +   P+           SDH  V+    +P
Sbjct: 470 EPMDRIDFIY-HKKLKTLHSDVVVVGDPKPEPYHADNEWTSDHAAVLSEFKLP 521


>gi|297674359|ref|XP_002815200.1| PREDICTED: nocturnin-like [Pongo abelii]
          Length = 431

 Score = 47.9 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/263 (14%), Positives = 65/263 (24%), Gaps = 28/263 (10%)

Query: 21  LAAWIKENNPDIICLQETKTEDKNFPFE--TLQSLNYHIETCGQKSYNGVAILSKYQPIE 78
           +   I    PDI+CLQE    D  F      L  L Y      +         S    +E
Sbjct: 179 ILEEILAYQPDILCLQEV---DHYFDTFQPLLSRLGYQGTFFPKP-------WSPCLDVE 228

Query: 79  IVTHLPGD--DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
                 G           +  +  I    + +    +     +   +   +       L+
Sbjct: 229 HNNGPDGCALFFLQNRFKLVNSANIRLTAMTLKTNQVAIAQTLECKESGRQFCIAVTHLK 288

Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN----MGFT 192
             +               N+         P+I   D               +        
Sbjct: 289 ARTGWERFRSAQGCDLLQNLQNITQGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAY 348

Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP------EATSLLHSARIDTKPR 246
             + A   +   Y+ W        ++    +D+I  S        A  LL   +I     
Sbjct: 349 KLLSADGQSEPPYTTWKIRTSGECRHT---LDYIWYSKHALNVRSALDLLTEEQIGPNRL 405

Query: 247 -GWTKPSDHTPVIVSLDIPEPRK 268
             +  PSDH  ++      E   
Sbjct: 406 PSFNYPSDHLSLVCDFSFTEEPD 428


>gi|325521811|gb|EGD00543.1| endonuclease/exonuclease/phosphatase [Burkholderia sp. TJI49]
          Length = 132

 Score = 47.9 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 17/39 (43%), Gaps = 4/39 (10%)

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
           D + ++      +    ID   R     SDH PV++ L+
Sbjct: 98  DFLFVTDTLLPRVARCEIDGDVR----ASDHQPVVLELN 132


>gi|260788626|ref|XP_002589350.1| hypothetical protein BRAFLDRAFT_217983 [Branchiostoma floridae]
 gi|229274527|gb|EEN45361.1| hypothetical protein BRAFLDRAFT_217983 [Branchiostoma floridae]
          Length = 372

 Score = 47.9 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/267 (12%), Positives = 73/267 (27%), Gaps = 26/267 (9%)

Query: 16  ARIHNLAAWIKENNPDIICLQETKTED--KNFPFETLQSLNYHIETCGQKSYNGVAILSK 73
           AR   +   +     D++ LQE  ++D  +   ++    L YH         + V     
Sbjct: 9   ARFQAIGEELCSGRYDLVSLQEVWSQDVYEKLVYQVQDVLPYHHYFYRHVKLSNVLHGWH 68

Query: 74  YQPIEIVTHLPGDDLDVQARFIEATFTINT------------QTLRIGNLYLPHGNPITS 121
              + + +  P          +                      +R     +      T 
Sbjct: 69  GSGLCVFSRYPIIGSHQHRFTLNGFPHTPHHPDWYGGKMVGLCQVRHPGAEINIYVTHTH 128

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLI-FAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
           T+Y+ +    K      +  L         + D NI+    +     +          + 
Sbjct: 129 TEYNHENDKDKAHRVLQAFELSQFIRHTGQSADVNILAGDLNNQPFELGLKIIESNTGMD 188

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM--LSPEATSLLHS 238
             +   ++    D+    +   + Y+ +  Y          R D+++   S         
Sbjct: 189 DGWLTAEHKNAEDSGLTWNLDDNNYTCYPDYPPC-------RYDYVLYKGSARCRVRCVH 241

Query: 239 AR--IDTKPRGWTKPSDHTPVIVSLDI 263
               +   P      SDH  V+  L++
Sbjct: 242 CETTMHKVPGKPFNYSDHEGVVAHLEL 268


>gi|73669331|ref|YP_305346.1| hypothetical protein Mbar_A1825 [Methanosarcina barkeri str.
           Fusaro]
 gi|72396493|gb|AAZ70766.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
          Length = 235

 Score = 47.9 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/262 (14%), Positives = 73/262 (27%), Gaps = 30/262 (11%)

Query: 4   VTVATWNVN-SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + + TWN N + R +  ++  +    +PD++ + E +  DK           Y+      
Sbjct: 1   MKIITWNCNMAFRKKYKHILPF----DPDLLIVSECEHPDK------FSDKFYNDVLWIG 50

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
            + N    +  +   EI  H    +       +          + + +            
Sbjct: 51  DNRNKGLGVFSFNDFEIAIHESYCENYRYVLPVTVNGNEAMNLIAVWSQNNTEDPKRRYI 110

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
               K     + L   S  +  +                      ++         + Q 
Sbjct: 111 GEVWKSLNYYKDLFRFSTIIAGDFNWNVIW-------DQGNQKYPLYGTLTDVINLLEQF 163

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG--IRIDHIMLSPEATSLLHSAR 240
                   FT+A         LY         + KNK     ID+I    +  +   S  
Sbjct: 164 DIFSMYHTFTNAEFGIEKEPTLY---------FRKNKKTPYHIDYIFAPSKIINCGKSFL 214

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           +      W   SDH P+I  L+
Sbjct: 215 VGKYE-DWISLSDHMPLIAELE 235


>gi|225387525|ref|ZP_03757289.1| hypothetical protein CLOSTASPAR_01278 [Clostridium asparagiforme
           DSM 15981]
 gi|225046361|gb|EEG56607.1| hypothetical protein CLOSTASPAR_01278 [Clostridium asparagiforme
           DSM 15981]
          Length = 317

 Score = 47.9 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 45/308 (14%), Positives = 87/308 (28%), Gaps = 54/308 (17%)

Query: 4   VTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQETK--TEDKNFPFETLQSLNYH 56
           + + T N +S+       ++   A  +    PD++ LQE      +     E L +L + 
Sbjct: 1   MKLITLNTHSLVEPDYENKLKLFAEAVLRERPDVVALQEVNQSMGEPAVGQERLGALGF- 59

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
           +E   + + + V   ++   I +        L        A +       +IG      G
Sbjct: 60  VECRERGNESKVEAGARGAVIPVRADNHAYRLAGLLAEGGAPYFWTWVPAKIGYGRYDEG 119

Query: 117 NPI--------TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDY--NIIPQPHDCYNP 166
             +        T   Y       K +    +  + L+        +  ++          
Sbjct: 120 TALFSRLPVAQTGWIYLTGSRDYKNWKTRKALEMILDFHGKRCRFFSLHMGWWKDGDEPF 179

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYS---FWDYYADSWSKNKG--- 220
                     L+            F        +   L S   + D Y  + +K+ G   
Sbjct: 180 AGQWERLSGYLKNASGDLCFLMGDFNSPAGMQGEGWQLVSGSGWLDTYGLAAAKDNGVTV 239

Query: 221 ----------------------------IRIDHIMLSPEATSLLHSARIDTKPRGWTKPS 252
                                       +RID+I ++ E   +L S  I     G    S
Sbjct: 240 GGVIDGWRDSPQNADGPAPGAEGAHENGMRIDYIWVNREI-PVLRSQVICNGINGPVV-S 297

Query: 253 DHTPVIVS 260
           DH  V++ 
Sbjct: 298 DHYGVMIE 305


>gi|254584744|ref|XP_002497940.1| ZYRO0F16984p [Zygosaccharomyces rouxii]
 gi|186929042|emb|CAQ43367.1| Inositol phosphosphingolipids phospholipase C [Zygosaccharomyces
           rouxii]
 gi|238940833|emb|CAR29007.1| ZYRO0F16984p [Zygosaccharomyces rouxii]
          Length = 462

 Score = 47.9 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/255 (13%), Positives = 71/255 (27%), Gaps = 19/255 (7%)

Query: 28  NNPDIICLQETKTED--KNFPFETLQSLNYH-IETCGQKSYNGVAILSKYQPIEIVTHLP 84
              D++ LQE   ++          ++  YH I   G  +  G+AILS+        +  
Sbjct: 78  EQYDVVALQEVWCQEDWDYIVMRCSENYPYHRIFYSGIITGPGLAILSRIPIESTFLYRF 137

Query: 85  GDDLDVQARFIEATFTINTQTLR----IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQ 140
             +    A      +   +  +     I N   P     +       +     +    + 
Sbjct: 138 PLNGRPTAVHRGDWYVGKSVAITLLQQIDNNTPPLAIMNSHMHAPYALQGDAAYACHRAC 197

Query: 141 RLEL-----------EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNM 189
           +                 +I  GD N  P            +      ++          
Sbjct: 198 QAWDFAKLANLYKKAGYAVIVTGDLNSRPGSLHHRLLTDETDLVDSWEQLYGQQDPETLA 257

Query: 190 GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE-ATSLLHSARIDTKPRGW 248
               + +  +      S  + Y      ++  R+D+ ++ P+        AR   +  G 
Sbjct: 258 KLKPSEQIIYGCTTCDSNLNTYRLDKRLDEACRLDYALVDPDRLLPTAAGARFTERIPGV 317

Query: 249 TKPSDHTPVIVSLDI 263
              SDH     +L +
Sbjct: 318 GSFSDHFAYTCTLKL 332


>gi|281349110|gb|EFB24694.1| hypothetical protein PANDA_015351 [Ailuropoda melanoleuca]
          Length = 113

 Score = 47.9 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 33/95 (34%), Gaps = 12/95 (12%)

Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR 246
             +   D  R  H     YSF+     ++S     RIDH +      S      I     
Sbjct: 16  NELDLIDIYRTLHPRTKKYSFYSNAHGTFS-----RIDHALGHKTGLSQYQKIEIIPCI- 69

Query: 247 GWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
                SDH  + + L+     K  ++S +  ++ I
Sbjct: 70  ----FSDHNALKLELN--HKEKPGRNSNTWRLRTI 98


>gi|330469350|ref|YP_004407093.1| endonuclease/exonuclease/phosphatase [Verrucosispora maris
           AB-18-032]
 gi|328812321|gb|AEB46493.1| endonuclease/exonuclease/phosphatase [Verrucosispora maris
           AB-18-032]
          Length = 236

 Score = 47.9 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/262 (13%), Positives = 78/262 (29%), Gaps = 39/262 (14%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V ++NV+  R  +  LA  +++  PD++ +Q           E  +   +  ++    
Sbjct: 10  LRVVSYNVHGQRDDVAALATVVRQLAPDVLIVQ-----------EGPRRFGWRAKSATLA 58

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +  G+ + +          LP     +          +  Q   +       G       
Sbjct: 59  ASFGLVVAAG--------GLPALGNLLLVSLRVRVTGVRHQRFPLTPGRHMRGAAYADCV 110

Query: 124 YDDKISWIKR-FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                 +               ++  +F  + ++ P P                     +
Sbjct: 111 VGGPARFTVAGSHLATDPVERPDQAKLFKRELDVAPLPVIAAAD-------LNEEPDGPA 163

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
           +  + +     A+ A       YS  D            RID + + P  T  +    + 
Sbjct: 164 WCTVAHGLTDAAVAADRADRLTYSCADPR---------RRIDGVFVDPRIT--VVDYDVL 212

Query: 243 TKPRGWTKPSDHTPVIVSLDIP 264
             P    + SDH P++V L +P
Sbjct: 213 DTPLSR-RASDHFPIVVDLLLP 233


>gi|221042678|dbj|BAH13016.1| unnamed protein product [Homo sapiens]
          Length = 212

 Score = 47.9 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 5/63 (7%)

Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73
          R  N+   IK  + D++CLQE   ++ ++  E    L+SL YH E   +           
Sbjct: 31 RFPNILKEIKHFDADVLCLQEV--QEDHYGAEIRPSLESLGYHCEYKMRTGRKPDGCAIC 88

Query: 74 YQP 76
          ++ 
Sbjct: 89 FKH 91


>gi|209549109|ref|YP_002281026.1| endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv.
          trifolii WSM2304]
 gi|209534865|gb|ACI54800.1| Endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv.
          trifolii WSM2304]
          Length = 267

 Score = 47.9 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%), Gaps = 2/52 (3%)

Query: 4  VTVATWNVNSIRARIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLN 54
          + + + N    R     L  ++++   D++CLQE  +    ++ +   +   
Sbjct: 1  MRIISLNAWGGRLH-EALIDYVRQAEADVLCLQEVLRAPGADWGWSIYRDAG 51


>gi|289167074|ref|YP_003445341.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           mitis B6]
 gi|288906639|emb|CBJ21473.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           mitis B6]
          Length = 208

 Score = 47.9 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 50/134 (37%), Gaps = 11/134 (8%)

Query: 1   MSVVTVATWNVN---SI-RARIHNLAAWIKENNPDIICLQETKTEDKNFPF-ETLQSLNY 55
           M+ + +  WNVN    + +     +   +K  + D++CL E K    +F F E L+SL Y
Sbjct: 1   MTQLKILNWNVNQRSGLGKQIPDVVVNELKHLDADVVCLTEYK---NHFEFCEQLKSLGY 57

Query: 56  HIETCG---QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
            +       ++  N V I  K + + +         D+   F+          L I    
Sbjct: 58  SLFMYPEYIERFQNEVLIAIKTKFVTLPKLTTFPKEDMFPDFLHLQIDFEGAPLHIIGAR 117

Query: 113 LPHGNPITSTKYDD 126
           +       S  Y+ 
Sbjct: 118 IKIATIDNSLSYNR 131


>gi|325279089|ref|YP_004251631.1| Endonuclease/exonuclease/phosphatase [Odoribacter splanchnicus DSM
           20712]
 gi|324310898|gb|ADY31451.1| Endonuclease/exonuclease/phosphatase [Odoribacter splanchnicus DSM
           20712]
          Length = 286

 Score = 47.9 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/275 (13%), Positives = 73/275 (26%), Gaps = 31/275 (11%)

Query: 4   VTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           + +AT+N+         NS   R  ++ A+I   +PDII +QE                 
Sbjct: 25  LRLATFNIRYDNSGDGPNSWPHRKDSICAFIHRVDPDIIDMQEV--LHHQLEVLKTGLPE 82

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTH--LPGDDLDVQARFIEATFTINTQTLRIGNL- 111
           Y +   G++        +     +              +          +    RI    
Sbjct: 83  YTVVGVGREDGKTAGEYAPIFFKQAKYTLLDQNTFWLCEKPDSVGMVGWDAALTRIATWV 142

Query: 112 --YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
                    I                R ++  +  +   I      I+    +       
Sbjct: 143 KLQDKKTGQILMVVNTHFDHIGTEARRNSALLIIEKIKEIVGTSPAILTGDFNVSEDWDA 202

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
                    + +   K+            +                   K  +ID I ++
Sbjct: 203 YKTITNNEFILKDAHKVAGKRTGVDFTYHN------------FGKIPAEKCEKIDFIFVT 250

Query: 230 PEATSLLHSARI-DTKPRGWTKPSDHTPVIVSLDI 263
           P+    + S+ I  ++       SDH P IV L+I
Sbjct: 251 PQI--RVISSYIPFSQLNDTLFLSDHNPEIVELEI 283


>gi|290956218|ref|YP_003487400.1| hypothetical protein SCAB_17031 [Streptomyces scabiei 87.22]
 gi|260645744|emb|CBG68835.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
          Length = 305

 Score = 47.9 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 43/272 (15%), Positives = 88/272 (32%), Gaps = 25/272 (9%)

Query: 1   MSVVTVATWNV---NSIR-----ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52
           +S +   ++N+   N++R      R     A +++  P +I  QE     +    ET   
Sbjct: 49  LSTM---SFNLRYANTVRPHSWAVRRPVTKALLRQEAPHVIGTQE-GLHQQLLDIETDLG 104

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
            N+     G+   N    ++ +     +  +      +                     +
Sbjct: 105 GNHRWIGTGRAGGNRDEFMAVFYDTRRLAPVEYRHFWLSDTPEVPGSNTWGGGSIRMVTW 164

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
           +   + +   +    ++     L   ++       +     +       D   P++   D
Sbjct: 165 VRFRDLLDGGREFYVLNTHLDNLSQYARDRAAALIVRRIAGF-------DRSLPLVVTGD 217

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY-SFWDYYADSWSKNKGIRIDHIMLSPE 231
                     +  + + G  D   A  +   LY +F  Y   +     G RID I+ +P 
Sbjct: 218 FNVAAHRNPVYDTMLDAGLVDTWDAAAERTDLYATFHGYRPLTPG---GDRIDWILTTPG 274

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            T   H A ++T       PSDH PV  +L +
Sbjct: 275 VT--AHRAAVNTFASNGQYPSDHLPVQATLTL 304


>gi|281349224|gb|EFB24808.1| hypothetical protein PANDA_020565 [Ailuropoda melanoleuca]
          Length = 102

 Score = 47.9 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 34/94 (36%), Gaps = 12/94 (12%)

Query: 188 NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRG 247
            +   D  R  H     YSF+     ++S     RIDH++      +      I      
Sbjct: 6   ELDLIDIYRTIHPRTKEYSFYSNAHGTFS-----RIDHVLGHKTGLNRYQKIEIIPCI-- 58

Query: 248 WTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
               SDH  + + L+     K  ++S +  ++ I
Sbjct: 59  ---FSDHNALKLELN--HKEKFGRNSNTWRLRTI 87


>gi|294875575|ref|XP_002767386.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239868949|gb|EER00104.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 437

 Score = 47.9 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 42/311 (13%), Positives = 88/311 (28%), Gaps = 57/311 (18%)

Query: 2   SVVTVATWNVNSI---------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52
           S + + +WNV+ +          AR  ++A+ I ++ P I+ LQE      +F     + 
Sbjct: 149 STLKILSWNVDGLDSHSDEIDMTARTMSVASHIIDHRPHIVLLQEL----IDFNTTWFRR 204

Query: 53  L---NYHIETCGQKSYN-------GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN 102
           L    Y                    + ++ + P+                       ++
Sbjct: 205 LLSKFYDFYIQSSPPLPYFVGILIDRSAVAVHGPLVTDNFPNTKMGRALVSLDGEVRLLS 264

Query: 103 TQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD 162
              +++        +  +  +               S         IF GD NI      
Sbjct: 265 GAPVKVHIATAHLESTKSFGRARVDQLKESFSDMRRSVGHSKSHLAIFGGDLNIRDDEVR 324

Query: 163 CYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI- 221
               +   +     ++  ++  +                   ++ WD   +    N GI 
Sbjct: 325 QALLLPNGSKKVDIIDAWEASGR--------------PKDSEFT-WDMRIND---NLGIK 366

Query: 222 -----RIDHIMLSPEATSLL----------HSARIDTKPRGWTKPSDHTPVIVSLDIPEP 266
                R D + L+   T  +              +D        PSDH  + + + I   
Sbjct: 367 GKPKARFDRLYLANSDTMKVSPQGFRLTGTTRCDMDEVKGKKRFPSDHFGIQLEMKIEMK 426

Query: 267 RKKQQDSTSQN 277
            +K  D ++ N
Sbjct: 427 EEKVIDLSNDN 437


>gi|170734592|ref|YP_001773706.1| endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia
          MC0-3]
 gi|169820630|gb|ACA95211.1| Endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia
          MC0-3]
          Length = 258

 Score = 47.9 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 12/50 (24%)

Query: 4  VTVATWNVNS------IRARIHNLAAWIKENNPDIICLQE-----TKTED 42
          + +AT+N++        RA +  +AA I E + D+I LQE     T+  D
Sbjct: 24 LRIATYNIHGGYGAWPARA-VDRIAAVIDELDADVIALQEVPLGGTRAPD 72


>gi|147774768|emb|CAN66795.1| hypothetical protein VITISV_034153 [Vitis vinifera]
          Length = 664

 Score = 47.9 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 2/41 (4%)

Query: 4  VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTED 42
          + + +WNV       +   + + IK N  D++CLQETK ++
Sbjct: 3  IRILSWNVRGANDSDKRKTIKSVIKSNKVDVVCLQETKIKE 43


>gi|107022880|ref|YP_621207.1| endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia AU
          1054]
 gi|116686877|ref|YP_840124.1| endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia
          HI2424]
 gi|105893069|gb|ABF76234.1| Endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia AU
          1054]
 gi|116652592|gb|ABK13231.1| Endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia
          HI2424]
          Length = 263

 Score = 47.9 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 12/50 (24%)

Query: 4  VTVATWNVNS------IRARIHNLAAWIKENNPDIICLQE-----TKTED 42
          + +AT+N++        RA +  +AA I E + D+I LQE     T+  D
Sbjct: 29 LRIATYNIHGGYGAWSARA-VDRIAAVIDELDADVIALQEVPLGGTRAPD 77


>gi|116252933|ref|YP_768771.1| exo/endo phosphatase [Rhizobium leguminosarum bv. viciae 3841]
 gi|115257581|emb|CAK08678.1| putative exo/endo phosphatase [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 369

 Score = 47.9 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 22/64 (34%)

Query: 223 IDHIMLSPEATSL--------LHSA-----------RIDTKPR-GWTKP--SDHTPVIVS 260
           +D++ LSP   +         + S             ++  PR GW +P  SDH PV+++
Sbjct: 306 LDYLWLSPALAAHNAGRLPEIIRSGQPYRTIFPPGQEVERYPRTGWDRPKASDHCPVVMT 365

Query: 261 LDIP 264
           LD+P
Sbjct: 366 LDLP 369


>gi|322693718|gb|EFY85569.1| exonuclease III [Metarhizium acridum CQMa 102]
          Length = 705

 Score = 47.9 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/262 (11%), Positives = 59/262 (22%), Gaps = 31/262 (11%)

Query: 22  AAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81
             +I     DI+ LQE             ++L +      Q    G+             
Sbjct: 394 VRFITNARADIVGLQE---STGGHAIRLAKALGWDY---WQGDDVGIISRYPMVEQYAPV 447

Query: 82  HLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQR 141
              G       R  E  F            Y    + ++  +        +R  +  +  
Sbjct: 448 ERCGAVRIALDRGQEINFWNCHLGYTPYGPYDFCFDHLSPEEVHKNEIKSRRTPQIINIM 507

Query: 142 LELEEP---------LIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192
             +++          +                   +      F     +       +   
Sbjct: 508 KHMQDHLSQSSKTPVIFTGDFNAPSHLDWTNATKKLHCGQGYFPWPTSKHPVDAGLIDSF 567

Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGI-----RIDHIMLSPEATSLLHSARI------ 241
             + +   T    ++    +  +  N+G      RID I       +    A +      
Sbjct: 568 REVHSDPLTKPGITW----SPIYLDNEGRVEPKDRIDFIY-HKGLKTRSSEAVVVGQPTA 622

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
                    PSDH  V     +
Sbjct: 623 QPDHYYNEWPSDHAAVKTVFKV 644


>gi|167523152|ref|XP_001745913.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163775714|gb|EDQ89337.1| predicted protein [Monosiga brevicollis MX1]
          Length = 585

 Score = 47.9 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/310 (11%), Positives = 68/310 (21%), Gaps = 37/310 (11%)

Query: 4   VTVATWNVNSIR----ARIHNLAAWIKENNPDIICLQET-KTEDKNFPFETL-QSLNYHI 57
           +TVAT+N+  +R     R   +   +     D++ LQE  K E  +     L Q L Y  
Sbjct: 101 LTVATYNLFGLRLAWETRWTGICKILGNVQADVLALQEVMKHEPTSTQAHLLAQELGYEY 160

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTH-----LPGDDLDVQARFIEATFTINTQTLRIGNLY 112
               +          +     +               +                      
Sbjct: 161 VYYARAHEADPKEGGEEGLAIVSRFPAAVVQTVPLTPMPGSVDANARVFLHARFDTIPAL 220

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRL-----------------ELEEPLIFAGDYN 155
                 + +  +    +      R     L                  +          N
Sbjct: 221 AGESLHVLANHWTYDATAQCHAARELLAYLDALPAADHVVLLGDLNIYVNSEWPLDWLTN 280

Query: 156 IIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW 215
            +P P   +               +    +              D    ++ + Y   + 
Sbjct: 281 RVPAPLREHTVNRCAEAMRQYQAGQSDSARRPAFRDVWHTSFAWDPGWTFTNFHYTNRTN 340

Query: 216 SKNKGIRIDHIML-SPEATSLLHSARIDTKPRGW-----TKPSDHTPVIVSLDIPEPRKK 269
              +  R D I+L S           +               SDH  V  +  +  P   
Sbjct: 341 LYERATRPDRILLRSEALVER--DVYLFGDALDGLVQPHLYASDHRGVATTFAV-RPGGA 397

Query: 270 QQDSTSQNMK 279
           ++  T     
Sbjct: 398 KEWPTGWARL 407


>gi|15888787|ref|NP_354468.1| hypothetical protein Atu1461 [Agrobacterium tumefaciens str. C58]
 gi|15156541|gb|AAK87253.1| hypothetical protein Atu1461 [Agrobacterium tumefaciens str. C58]
          Length = 269

 Score = 47.9 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/278 (11%), Positives = 80/278 (28%), Gaps = 32/278 (11%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +   N    +     L  +I  ++PDI+CLQE          + L   ++ +E   + 
Sbjct: 3   MRLICLNGWGGKLHDK-LVPYIASSDPDILCLQEV-VHTPAATQDWLSYRDHGVELPQRA 60

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT------------LRIGNL 111
           ++      +    + I       DL        + F + T                 G  
Sbjct: 61  NFFRDVAEALPDHVAIFCPAAQGDLWQGETRYPSQFGLATFVRKSIAIIAQAQGFVHGVF 120

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
                     ++    I               +       G ++I  + H     + +  
Sbjct: 121 SADGYGNHPRSRTAHAIRVFDFTTGQPVVIAHMHGLRDLEGKHDIPARLHQAKRLVQFVK 180

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTH-------HLYSFWDYYADSWSKNKGIRI- 223
           +     +          +  +      ++           ++  D     ++K    R  
Sbjct: 181 NIAEDGDRVIVCGDFNVLPDSRTFAVLNELDLVELVTTRGFT--DTRTSHYAKPN--RYA 236

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           D+++++P     +    +  +P    + SDH P+++  
Sbjct: 237 DYLLVNPAV--KVSQFDVVRQP----EVSDHCPLLLEF 268


>gi|325293378|ref|YP_004279242.1| hypothetical protein AGROH133_07235 [Agrobacterium sp. H13-3]
 gi|325061231|gb|ADY64922.1| hypothetical protein AGROH133_07235 [Agrobacterium sp. H13-3]
          Length = 369

 Score = 47.9 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 46/150 (30%), Gaps = 24/150 (16%)

Query: 136 RFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAI 195
                     +     GD N   +                  E R +        F    
Sbjct: 221 NRWGANNTRNKNFAICGDMNDYQERISISGDRRSGYSFTPVEEERSALDIFTADDFVTNP 280

Query: 196 RATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT-------SLLHSA--------- 239
            +  D    ++   Y++    +    ++D+I LSP            +  A         
Sbjct: 281 MSRRDVMDRWTL--YHSRGPQEQHLCQLDYIWLSPHLAHINATRVPEIIRAGQPYRTVFP 338

Query: 240 ---RIDTKPR-GWTKP--SDHTPVIVSLDI 263
               +D  PR GW +P  SDH PV+++LD+
Sbjct: 339 PGQEVDRYPRTGWDRPKASDHCPVVMTLDL 368


>gi|229002991|ref|ZP_04160856.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock3-17]
 gi|228758256|gb|EEM07438.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock3-17]
          Length = 354

 Score = 47.9 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/270 (14%), Positives = 82/270 (30%), Gaps = 39/270 (14%)

Query: 20  NLAAWIKENNPDIICLQE-------------TKTEDKNFPFETLQSLNYHIETCGQK--- 63
           N+ +++++ + D I +QE              K        +   +  Y+          
Sbjct: 97  NMLSFLQKEDSDFILVQEMDEKSLRSFDVNQYKAFQDGL-KDHASTFGYNFNAQWVPVPI 155

Query: 64  ------SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
                 + +G+   SKY+  E+  +          +  E    I    + + N       
Sbjct: 156 KKPHGYTNSGLGSFSKYKVEEVTRYQLPGREMWLRQLFELDRAIVEHKVPVDNGKYLRMV 215

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
            +  + YD   +  K+ + F  + +         GDY ++    +     +   D  F  
Sbjct: 216 NVHLSAYDKGGNIRKQQVEFLKEYMNRHYKN---GDYLVLGGDWNQLLSDVQLKDPKFKE 272

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW----SKNKGIRIDHIMLSPEAT 233
           E  +   +L         +   D     + W    +       +N    ID  ++SP   
Sbjct: 273 EWPEWLVQLPEDFTDGGFQWAVDD----TVWTVRDNVKSYVEDENFVTIIDGFLVSPN-- 326

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             +    +      +   SDH PV   L +
Sbjct: 327 --VEIVSVQGHDLKFEN-SDHNPVNAVLKL 353


>gi|229009363|ref|ZP_04166629.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock1-4]
 gi|228751907|gb|EEM01668.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock1-4]
          Length = 354

 Score = 47.9 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/270 (14%), Positives = 82/270 (30%), Gaps = 39/270 (14%)

Query: 20  NLAAWIKENNPDIICLQE-------------TKTEDKNFPFETLQSLNYHIETCGQK--- 63
           N+ +++++ + D I +QE              K        +   +  Y+          
Sbjct: 97  NMLSFLQKEDSDFILVQEMDEKSLRSFDVNQYKAFQDGL-KDHASTFGYNFNAQWVPVPI 155

Query: 64  ------SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
                 + +G+   SKY+  E+  +          +  E    I    + + N       
Sbjct: 156 KKPHGYTNSGLGSFSKYKVEEVTRYQLPGREMWLRQLFELDRAIVEHKVPVDNGKYLRMV 215

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
            +  + YD   +  K+ + F  + +         GDY ++    +     +   D  F  
Sbjct: 216 NVHLSAYDKGGNIRKQQVEFLKEYMNRHYKN---GDYLVLGGDWNQLLSDVQLKDPKFKE 272

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW----SKNKGIRIDHIMLSPEAT 233
           E  +   +L         +   D     + W    +       +N    ID  ++SP   
Sbjct: 273 EWPEWLVQLPEDFTDGGFQWAVDD----TVWTVRDNVKSYVEDENFVTIIDGFLVSPN-- 326

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             +    +      +   SDH PV   L +
Sbjct: 327 --VEIVSVQGHDLKFEN-SDHNPVNAVLKL 353


>gi|212540906|ref|XP_002150608.1| reverse transcriptase, putative [Penicillium marneffei ATCC 18224]
 gi|210067907|gb|EEA21999.1| reverse transcriptase, putative [Penicillium marneffei ATCC 18224]
          Length = 1071

 Score = 47.9 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 19/58 (32%), Gaps = 4/58 (6%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
           ID ++ S E    +    I     G    SDH  +    DI  P +   +       P
Sbjct: 26  IDLVLASTELAEEMVKCGIHYTNHG----SDHQAIETEFDISVPDRPTTERLLWKNAP 79


>gi|311747824|ref|ZP_07721609.1| putative endonuclease/exonuclease/phosphatase family protein
           [Algoriphagus sp. PR1]
 gi|126575815|gb|EAZ80125.1| putative endonuclease/exonuclease/phosphatase family protein
           [Algoriphagus sp. PR1]
          Length = 278

 Score = 47.9 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/270 (12%), Positives = 78/270 (28%), Gaps = 41/270 (15%)

Query: 2   SVVTVATWNV-------NSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52
           + +TV T+N+       N  R  + +  +AA I + +PD++ +QE               
Sbjct: 39  NTITVLTYNIYHGEDPAN--RGTSNLDEIAALILQYSPDVVAMQEV-------------- 82

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
                      +     +  K   +              A+ ++       + L +    
Sbjct: 83  --------DSMTTRTAGVYGKKVDLVQELAKLTGYSGYFAKAMDYAEGGYGEGLLVKGEA 134

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
           +     +      +  +      + ++ +        F  ++             +    
Sbjct: 135 IFSTQNLPIPHGGEPRAAAWAEFKLSNDKKIAIAGTHFCHEFEENRIAQVKEISKVAGQS 194

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
               +       +  +  +   I    D     + +     S     G RID++   P  
Sbjct: 195 NLPVIWAGDLNLRPDSEAYRSIIGTWKDAGSDPTPYSPTFGS--LKDGPRIDYVWFDPS- 251

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
              L S ++   P      SDH PV+V+L 
Sbjct: 252 KFTLESYQVLDVP-----FSDHYPVLVTLK 276


>gi|242797311|ref|XP_002482986.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
 gi|218719574|gb|EED18994.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
          Length = 1084

 Score = 47.9 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 20/56 (35%), Gaps = 3/56 (5%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278
           ID +  S    + + S   DTKP  W    DH P+    D+   R         N 
Sbjct: 803 IDLVWASHNLANRVVSC--DTKPEWWYGA-DHVPISTQFDLTAIRVPPLVRKQWNA 855


>gi|189461907|ref|ZP_03010692.1| hypothetical protein BACCOP_02573 [Bacteroides coprocola DSM 17136]
 gi|189431301|gb|EDV00286.1| hypothetical protein BACCOP_02573 [Bacteroides coprocola DSM 17136]
          Length = 289

 Score = 47.9 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/266 (13%), Positives = 75/266 (28%), Gaps = 25/266 (9%)

Query: 8   TWNV------NSIRA---RIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYHI 57
           T+N+      +S+     R  N+A +IK  + DI+ +QE    + ++      +     +
Sbjct: 35  TFNIRYDNPGDSLNNWQYRKDNVAQFIKSQDIDIVGMQEVLHNQLEDLKSRLPEYAEVGV 94

Query: 58  ETCGQKSYNGVA-ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                K+    + +  K    E++                  +      +          
Sbjct: 95  GREDGKTKGEYSPLFYKKDRFEVLDSNTFWLSQYPDSVGFIGWDGACSRIATWAKLKDKK 154

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
                   +     +    R     L +E+     GD   +              +   T
Sbjct: 155 TGKIFMAVNTHFDHVGTEARRKGALLIIEKIKEIVGDQPAVLTGDFNVTDQSEAYETITT 214

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
            E        +                 Y+F D        +   +ID I ++P+    +
Sbjct: 215 NEFVLKDAYKEAAQREGV---------DYTFHD--FGRIPADSCDQIDFIFVTPQI--KV 261

Query: 237 HSARIDTK-PRGWTKPSDHTPVIVSL 261
            S+ I  +        SDH P +V L
Sbjct: 262 ESSYIPQEAEEAGQFLSDHNPEVVHL 287


>gi|289168236|ref|YP_003446505.1| hypothetical protein smi_1403 [Streptococcus mitis B6]
 gi|288907803|emb|CBJ22643.1| conserved hypothetical protein [Streptococcus mitis B6]
          Length = 271

 Score = 47.9 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/273 (12%), Positives = 79/273 (28%), Gaps = 16/273 (5%)

Query: 4   VTVATWNVNSI--RARIHNLAAWIK---ENNPDIICLQETK-------TEDKNFPFETLQ 51
           +   T N +S   +         ++   E + D+IC QE          E  +F      
Sbjct: 1   MKFLTLNTHSWMEKEAEEKFQFLLEDILEKDYDLICFQEINQEITSPEVEVNDFYQALPA 60

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
           +   H +   +     ++   K        +  G D   +   I +   I  + + + ++
Sbjct: 61  AEPIHQDHYVRLLVEKLSEQGKNYYWTWAYNHIGYDRYHEGVAILSKTPIEAREILVSDV 120

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG-DYNIIPQPHDCYNPIIWE 170
             P           + +   K     +      ++        +  + +  +    +  +
Sbjct: 121 DDPTDYHTRRVALAETVVDGKELAVASVHLSWWDKGFQEEWARFEAVLKELNKPLLLAGD 180

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230
            +     E  Q+      +G  DA     +    Y+            + +RID++  + 
Sbjct: 181 FNNPAGQEGYQAILASP-LGLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTTK 239

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           E    +    +        + SDH  +   L  
Sbjct: 240 ELA--VEKLHVVFDGNKSPQVSDHYGLSAILSW 270


>gi|152985117|ref|YP_001351598.1| hypothetical protein PSPA7_6287 [Pseudomonas aeruginosa PA7]
 gi|150960275|gb|ABR82300.1| hypothetical protein PSPA7_6287 [Pseudomonas aeruginosa PA7]
          Length = 274

 Score = 47.9 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 14/65 (21%)

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           +F  +      +N    +DHI+LS +    L    +  +P      SDH PV V + +P+
Sbjct: 212 TFPSWRP---QRN----LDHILLSSDLA--LERVDVLDQP-----ISDHLPVSVEIRLPD 257

Query: 266 PRKKQ 270
             + +
Sbjct: 258 NLRDR 262


>gi|147832907|emb|CAN77370.1| hypothetical protein VITISV_033119 [Vitis vinifera]
          Length = 1190

 Score = 47.9 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 22/40 (55%), Gaps = 2/40 (5%)

Query: 4  VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTE 41
          + + +WNV      ++   + A I+    D++C+QETK +
Sbjct: 3  IKLVSWNVRGANDSSKRKVIKAMIRSQRADLVCIQETKIQ 42


>gi|119613771|gb|EAW93365.1| angel homolog 2 (Drosophila), isoform CRA_a [Homo sapiens]
          Length = 465

 Score = 47.9 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 5/63 (7%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73
           R  N+   IK  + D++CLQE   ++ ++  E    L+SL YH E   +           
Sbjct: 121 RFPNILKEIKHFDADVLCLQEV--QEDHYGAEIRPSLESLGYHCEYKMRTGRKPDGCAIC 178

Query: 74  YQP 76
           ++ 
Sbjct: 179 FKH 181


>gi|325269449|ref|ZP_08136066.1| endonuclease/exonuclease/phosphatase [Prevotella multiformis DSM
           16608]
 gi|324988370|gb|EGC20336.1| endonuclease/exonuclease/phosphatase [Prevotella multiformis DSM
           16608]
          Length = 290

 Score = 47.9 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/249 (14%), Positives = 71/249 (28%), Gaps = 18/249 (7%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQP 76
           R   L  +I    P +   QE          + L++  Y I              + +  
Sbjct: 46  RCPQLCDFINFEQPAVFGTQEVLVTQLRDLLQGLEAYAY-IGVGRDDGREEGEYAAIFYR 104

Query: 77  IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
            +++  L   +  +       +   +   +RI               Y          + 
Sbjct: 105 KDLLKLLDSGNFWLSQTPERPSLGWDAACIRICTWGKFEDRATGKQFYFFNT-----HMD 159

Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIR 196
                   E   +      ++ +         +  D    +    S   +    + +A +
Sbjct: 160 HVGTVARRESARLILQRIGLLAKAQPTILTGDFNVDQTDEIYGIFSRSGILRDCYANARQ 219

Query: 197 ATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK----PS 252
               T    ++ D+  DS S     RIDH+ +S +    +    I T      K     S
Sbjct: 220 RMAPTG---TWNDFMQDSRSN---ARIDHVFVSSDFD--IPHYAIFTNSYWTGKSRRNIS 271

Query: 253 DHTPVIVSL 261
           DH PV+V L
Sbjct: 272 DHYPVMVKL 280


>gi|296124108|ref|YP_003631886.1| endonuclease/exonuclease/phosphatase [Planctomyces limnophilus DSM
           3776]
 gi|296016448|gb|ADG69687.1| Endonuclease/exonuclease/phosphatase [Planctomyces limnophilus DSM
           3776]
          Length = 387

 Score = 47.9 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/260 (11%), Positives = 64/260 (24%), Gaps = 22/260 (8%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +A+ NV   +    ++   ++E  PD++  QE+++ +     +     +         
Sbjct: 146 LRIASCNVQDYQPAFGDVLRDLEELPPDVVAFQESRSINP-LCEDYFADWHKVQVEYFFV 204

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +      +  +          G    +  +            + +             + 
Sbjct: 205 ASKWPLEVLGHCDDSPFERSSG----LVVKVAHPEHPFALANIHLMTARPGLRELTPGSI 260

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
                      L         +         N +P          +   A   +      
Sbjct: 261 LRGDGPAELAALTLMRSEEMQQLRHFIENARNGLP----LIVVGDFNTPASSHVFQEAWG 316

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
                        +        SFW     +W      RIDHI ++PE            
Sbjct: 317 DLTGGFETAAIGPSHTAPCRPISFWP---GTWP---WSRIDHIRVTPEWKF-------HQ 363

Query: 244 KPRGWTKPSDHTPVIVSLDI 263
              G    SDH  V   L++
Sbjct: 364 FVTGDRNGSDHRLVACELEL 383


>gi|296195555|ref|XP_002745450.1| PREDICTED: nocturnin [Callithrix jacchus]
          Length = 428

 Score = 47.9 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/263 (14%), Positives = 65/263 (24%), Gaps = 28/263 (10%)

Query: 21  LAAWIKENNPDIICLQETKTEDKNFPFE--TLQSLNYHIETCGQKSYNGVAILSKYQPIE 78
           +   I    PDI+CLQE    D  F      L  L Y      +         S    +E
Sbjct: 176 ILEEILAYQPDILCLQEV---DHYFDTFQPLLSRLGYQGTFFPKP-------WSPCLDVE 225

Query: 79  IVTHLPGD--DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
                 G           +  +  I    + +    +     +   +   +       L+
Sbjct: 226 HNNGPDGCALFFLQNRFKLINSANIRLTAMTLKTNQVAIAQTLECKESGRQFCIAVTHLK 285

Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN----MGFT 192
             +               N+         P+I   D               +        
Sbjct: 286 ARTGWERFRSAQGCDLLQNLQNITQGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAY 345

Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP------EATSLLHSARIDTKPR 246
             + A   +   Y+ W        ++    +D+I  S        A  LL   +I     
Sbjct: 346 KLLSADGQSEPPYTTWKIRTSGECRHT---LDYIWYSKHALNVRSALDLLTEEQIGPNRL 402

Query: 247 -GWTKPSDHTPVIVSLDIPEPRK 268
             +  PSDH  ++      E   
Sbjct: 403 PSFNYPSDHLSLVCDFSFTEESD 425


>gi|22208512|gb|AAM94327.1| putative reverse transcriptase [Sorghum bicolor]
          Length = 1998

 Score = 47.9 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/257 (13%), Positives = 71/257 (27%), Gaps = 38/257 (14%)

Query: 6    VATWNVNSIRARIHNLAAW------IKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
            +  WNV  + ++      W      I +   DIICLQETK    +F    L+++      
Sbjct: 810  ILHWNVRGLNSKEK----WNPIRNKIVDLAVDIICLQETK--KDSFDIAFLRNI------ 857

Query: 60   CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
                 ++    L        +       L          + I+ Q   + N         
Sbjct: 858  -CPPDFDRFEYLPLVGASGGILTAWKSKLFSGELIFSNEYAISIQMSSMHNN-------- 908

Query: 120  TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
             S    +  +      +                D+ ++   +          +   + E+
Sbjct: 909  DSWLLTNVYAPCTDEGKRQFVNWFKNIQTPHEVDWLVVGDFNLMRKHEDRNKEGGDSSEM 968

Query: 180  RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
                  + ++G  + I         Y++ +  ++   +     ID    S          
Sbjct: 969  FLFNSAISSLGLNEIIL----QGRKYTWSNMQSNPLLQK----IDWTFTSNSWNIKFLDT 1020

Query: 240  RIDTKPRGWTKPSDHTP 256
             +         PSDH P
Sbjct: 1021 SVKGYDM---TPSDHAP 1034


>gi|226942361|ref|YP_002797434.1| endonuclease/exonuclease/phosphatase family protein [Azotobacter
           vinelandii DJ]
 gi|226717288|gb|ACO76459.1| endonuclease/exonuclease/phosphatase family protein [Azotobacter
           vinelandii DJ]
          Length = 286

 Score = 47.9 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 14/60 (23%)

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           +F  +            IDHI+LSP  T  L   ++  +P      SDH PV V + +PE
Sbjct: 229 TFPSWRPQ-------RCIDHILLSPSLT--LERVQVLPQP-----ISDHLPVAVEIRLPE 274


>gi|319654834|ref|ZP_08008910.1| hypothetical protein HMPREF1013_05532 [Bacillus sp. 2_A_57_CT2]
 gi|317393552|gb|EFV74314.1| hypothetical protein HMPREF1013_05532 [Bacillus sp. 2_A_57_CT2]
          Length = 237

 Score = 47.9 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/259 (11%), Positives = 62/259 (23%), Gaps = 25/259 (9%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +  WN      R  +    +K    DI+ + E          E+ +           +
Sbjct: 1   MKLIVWNAA---MRFRDKLEHLKSYQADILIIPE---------SESPEKWG--------Q 40

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +         +   ++   +    L+   +              I  L     N I    
Sbjct: 41  TKLKDVNQFLWFGEKVNKGIGIFTLNEHYKIELHPLYNKDFRYIIPLLVTGKRNFILFAV 100

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +                        +      I    +   N          T  V    
Sbjct: 101 WSQNTKTKFESYIGQIYLALKYYDTLLKEPCVIAGDWNSNKNFNHIRRVGTHTDVVNLLK 160

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
            K     +       H      + +     +   +    ID+I  S +  S L+   +  
Sbjct: 161 SKGITSTYHHFYNEEHGVESQPTHYFRKEYARPFH----IDYIFTSKDILSSLNKMEVGK 216

Query: 244 KPRGWTKPSDHTPVIVSLD 262
               W K SDH P++   +
Sbjct: 217 HE-NWIKLSDHMPLLTDFN 234


>gi|209550061|ref|YP_002281978.1| endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209535817|gb|ACI55752.1| Endonuclease/exonuclease/phosphatase [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 369

 Score = 47.9 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 22/64 (34%)

Query: 223 IDHIMLSPEATSL--------LHSA-----------RIDTKPR-GWTKP--SDHTPVIVS 260
           +D++ LSP+  +         + S             ++  PR GW +P  SDH PV+++
Sbjct: 306 LDYLWLSPDLAAHNAGRLPEIIRSGQPYRTIFPPGQEVERYPRTGWDRPKASDHCPVVMT 365

Query: 261 LDIP 264
           LD+P
Sbjct: 366 LDLP 369


>gi|168020129|ref|XP_001762596.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162686329|gb|EDQ72719.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 463

 Score = 47.9 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/264 (13%), Positives = 62/264 (23%), Gaps = 40/264 (15%)

Query: 4   VTVATWNV-------NSIRARIHNLAAWIK--ENNPDIICLQE-----TKT-----EDKN 44
           +T+A++N+       N  R R   +   +      PDII LQE     TK      +   
Sbjct: 120 LTIASYNIQCLGRGLNGRRKRRK-IRDLLHISHLQPDIILLQEERLTLTKCIARTVQMNL 178

Query: 45  FPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
                L     +       +     I S    I  +T+   +   +             Q
Sbjct: 179 LTGAVLWKEGGYSAYDDSYAGGTAIIASYKFAIIAITNSICEHGVIVQ--------GRAQ 230

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
            L   N        +    Y         + + A   L   + ++     +         
Sbjct: 231 YLTYLNSAFEKVGILNIYGYSYIGPGASLWQKIADFPLSETKWIMMG---HCNSIEDLSD 287

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA---THDTHHLYSFWDYYADSWSKNKGI 221
                        E       L  +G  D        H     Y       +       +
Sbjct: 288 KLGGNPTTGKGPRENESWTTLLIQLGLQDKFYMGVFRHMNQKRY----IRDNRRQHPHML 343

Query: 222 --RIDHIMLSPEATSLLHSARIDT 243
             RID   ++ E            
Sbjct: 344 ANRIDRAYVTSEIQERGEETWTHK 367


>gi|154272365|ref|XP_001537035.1| predicted protein [Ajellomyces capsulatus NAm1]
 gi|150409022|gb|EDN04478.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 1331

 Score = 47.9 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 28/75 (37%), Gaps = 8/75 (10%)

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           + W           G  ID   LSP     L    I  +     K SDH P+  +L++  
Sbjct: 408 TTWQDRGSP-----GTTIDLTFLSPLLHDKLRRCAIAEEA---CKGSDHKPMETTLELTP 459

Query: 266 PRKKQQDSTSQNMKP 280
             K+ +    +N +P
Sbjct: 460 IPKEAERRNMKNAEP 474


>gi|269960777|ref|ZP_06175148.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269834441|gb|EEZ88529.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 442

 Score = 47.9 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/284 (13%), Positives = 80/284 (28%), Gaps = 45/284 (15%)

Query: 4   VTVATWNVNSIRA-------RIHNLAAWIKENNPDIICLQETKTE-DKNFPFETLQSLNY 55
           + + T+N+ ++ A       R   +  ++K    D++ LQE        F  E  +   Y
Sbjct: 178 LKLMTYNIWALPAIASHIGDRYELIPDYVK--GYDVLALQEVFASGRDAFLRELAKEYPY 235

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
             +   +  +N             + +         +               I      H
Sbjct: 236 QTKMLDKDGFNIYDGGVIIVSRYPIVNQAQYVFPDCSGTDCFADKGVNYAEIIKGGQAYH 295

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
                +  +D   +   R         + ++    A   NI       Y+     N    
Sbjct: 296 VFATHTASFDTDTAREYRQ-------RQFKQMRTMAQSLNIPTNETVVYSGDFNVNK--- 345

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYS--FWDYYADSWS-------KNKGIRIDHI 226
                              + A    +  Y+   +D   ++++       +N    +D++
Sbjct: 346 ------LKFPGDYQQMIANLSAIEPQYSGYTASTFDPRINNFAGEALSGGENVEY-LDYV 398

Query: 227 MLSPEA-TSLLHSARIDTKPRGWTK-------PSDHTPVIVSLD 262
           M+S E      +  R+D  PR            SDH PV   + 
Sbjct: 399 MVSNEYGVKSFNDNRVD-VPRSTAGSLWKHYNLSDHFPVSAVIK 441


>gi|260173058|ref|ZP_05759470.1| hypothetical protein BacD2_14398 [Bacteroides sp. D2]
 gi|315921335|ref|ZP_07917575.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313695210|gb|EFS32045.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 575

 Score = 47.9 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/251 (12%), Positives = 76/251 (30%), Gaps = 20/251 (7%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
             + +AT N+      +  +  +    + D++C QE            +Q+   ++ T  
Sbjct: 299 KTLKLATQNLWGKSTSV--VLDYFNRIDVDVLCAQEC----SGLSESDIQAQGLYVHTHS 352

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
                  +I+S+Y    I  +  G  +D+    +      +      G   L        
Sbjct: 353 NNGQGKCSIISRYPFSGITPNKYGAYIDLGEGIVVLVMNCHGAYFPYGPYQLNGIEYKDF 412

Query: 122 TKYDDKISWIKRFLRFASQRLEL--EEPLIFAGDYNIIPQPHDCYNPIIWENDA------ 173
              DD    +K         ++   E+       +  +    +  + + W   A      
Sbjct: 413 PATDDVDYVVKVNKEARQGMVDKLLEDFNSSTTPFVCLSGDFNEPSWLDWTEGALSAGLA 472

Query: 174 ---CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230
                    R  ++          I     TH  +++    +   +K+   R+D  + + 
Sbjct: 473 PYVVQWPTTRSLWEGGIKGDAYRTIHPDPVTHPGFTWTPRPSKKDTKD---RLDLTLYTL 529

Query: 231 EATSLLHSARI 241
              + + S ++
Sbjct: 530 SPNTEVKSCQV 540


>gi|228998497|ref|ZP_04158085.1| Exonuclease III [Bacillus mycoides Rock3-17]
 gi|229005973|ref|ZP_04163663.1| Exonuclease III [Bacillus mycoides Rock1-4]
 gi|228755241|gb|EEM04596.1| Exonuclease III [Bacillus mycoides Rock1-4]
 gi|228761222|gb|EEM10180.1| Exonuclease III [Bacillus mycoides Rock3-17]
          Length = 49

 Score = 47.9 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 7/29 (24%), Positives = 14/29 (48%), Gaps = 2/29 (6%)

Query: 4  VTVATWNVNSIRA--RIHNLAAWIKENNP 30
          +   +WNVN +RA         +++E + 
Sbjct: 1  MKFISWNVNGLRAVIAKGGFIEYLEEADA 29


>gi|304311554|ref|YP_003811152.1| hypothetical protein HDN1F_19240 [gamma proteobacterium HdN1]
 gi|301797287|emb|CBL45507.1| Hypothetical protein HDN1F_19240 [gamma proteobacterium HdN1]
          Length = 306

 Score = 47.9 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/289 (11%), Positives = 68/289 (23%), Gaps = 69/289 (23%)

Query: 2   SVVTVATWNVN------------------------SIRARIHNLAAWIKENNPDIICLQE 37
           SV+ + ++N++                          R R+  + + +  +  D + LQE
Sbjct: 54  SVLRLLSYNIHAGLGTSSPHHYVTKSWRNLIPDTKGAR-RLDRIGSIL--SGYDFVALQE 110

Query: 38  TKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA 97
               D                +      N V   ++    +        D     ++   
Sbjct: 111 V---DGG--------------SIRSSFINQVRYFAEQGQFDYWYQQLNRDFGRFGQYSNG 153

Query: 98  TFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII 157
                     I +  LP      +             +      L              +
Sbjct: 154 -ILSRYIPYEIQDHKLPGLKGRGAIVARYGDLSNPLVVVCLHLALGERARNRQLAYLRDL 212

Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK 217
                    +I   D   + E   +    +                  S+    +     
Sbjct: 213 ---IGIAEHVIVMGDLNCSGEQILATPLRETHLIQANGSHHTYP----SWKPQRS----- 260

Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEP 266
                IDHI++SP     +    +          SDH P+ + + +P  
Sbjct: 261 -----IDHILVSPSL--HIRRVEVLDVAL-----SDHRPIAMEIKLPAS 297


>gi|241760900|ref|ZP_04758989.1| Endonuclease/exonuclease/phosphatase [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|260753130|ref|YP_003226023.1| endonuclease/exonuclease/phosphatase [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
 gi|283856234|ref|YP_162080.2| endonuclease/exonuclease/phosphatase [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|241374519|gb|EER63980.1| Endonuclease/exonuclease/phosphatase [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|258552493|gb|ACV75439.1| Endonuclease/exonuclease/phosphatase [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
 gi|283775229|gb|AAV88969.2| Endonuclease/exonuclease/phosphatase [Zymomonas mobilis subsp.
           mobilis ZM4]
          Length = 239

 Score = 47.9 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/279 (12%), Positives = 72/279 (25%), Gaps = 66/279 (23%)

Query: 3   VVTVATWNVNSIRAR-------IHNLAAWIKENNPDIICLQE--TKT--EDKNFPFETLQ 51
            + VA++N++  +A           + + + E + D + LQE   +        PF+ L 
Sbjct: 7   TIKVASYNIH--KAIGADKRRDPERILSVLDEIDADCVVLQEADHRLGKRRAILPFDALA 64

Query: 52  SLNYHIET----CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107
           +  Y             ++G A+L +     +               I     I  +  R
Sbjct: 65  AHGYSYVPLSLRSCSLGWHGNALLLRDFASCVAYERVRLPRLEPRGAIICDIKIRGRVWR 124

Query: 108 IGNLYLPHGN--PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165
           +   +L            +        +         +  +     G   ++P       
Sbjct: 125 LIGSHLDLSGLFRRRQVAFIVDRLRNLQRDLPTVIMGDFNQWRRRDGCLRLLPDDFSV-- 182

Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225
                                  +    +  A H                       +D 
Sbjct: 183 -----------------------LPTGASFPAQHPLVG-------------------LDR 200

Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
           I+++P+         +   P    + SDH PV   L + 
Sbjct: 201 IIIAPQI--RYLECGVHNTPLAR-QASDHLPVWAKLALS 236


>gi|242761128|ref|XP_002340120.1| transposon I factor, putative [Talaromyces stipitatus ATCC 10500]
 gi|218723316|gb|EED22733.1| transposon I factor, putative [Talaromyces stipitatus ATCC 10500]
          Length = 1384

 Score = 47.5 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 21/65 (32%), Gaps = 4/65 (6%)

Query: 209 DYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268
            +       +    ID ++ S   T  +    I     G    SDH  +    DIP P  
Sbjct: 618 TWQGGGQGGDYESTIDLVLASENLTDSMVKCAIH----GTEHGSDHRAIETVFDIPRPGP 673

Query: 269 KQQDS 273
             Q+ 
Sbjct: 674 NHQER 678


>gi|187933196|ref|YP_001884567.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum B str. Eklund 17B]
 gi|187721349|gb|ACD22570.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum B str. Eklund 17B]
          Length = 262

 Score = 47.5 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/277 (12%), Positives = 81/277 (29%), Gaps = 32/277 (11%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET------KTEDKNFPFETLQS 52
           + + T N +S +      +I  LA  I E N D I LQE       K  + N   +    
Sbjct: 1   MKLLTLNCHSWQEENQIDKIKYLAKIISEKNYDAIALQEISQSIEAKVINNNLKVDNFAV 60

Query: 53  L------NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
           L       Y+        ++ +      + + + T     +                   
Sbjct: 61  LLKAELDKYNTNYNFFWDFSHIGYGKYEEGLAVFTKHNIVNEKSFFISKGTDREYWKTRK 120

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
            +   +  +   I    Y   + W +        +++       + +        +    
Sbjct: 121 IVQVTFEYNNENID--LYSCHLGWWEDEEEPFKYQVKRLLEENTSNNITFFMGDFNNNAF 178

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226
           +  E            +  L N G  D    + +  +  +              +R+D I
Sbjct: 179 VRNEG-----------YDYLVNKGLVDTFNISKEADNGITVKGNIDGWDENKDKLRLDLI 227

Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           + + +    + ++++          SDH  V +SL++
Sbjct: 228 LSNKKLD--VITSKVIFNGTNKDVISDHYGVEISLNL 262


>gi|320170231|gb|EFW47130.1| synaptojanin-PB [Capsaspora owczarzaki ATCC 30864]
          Length = 1161

 Score = 47.5 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 45/305 (14%), Positives = 83/305 (27%), Gaps = 62/305 (20%)

Query: 8   TWNVNSI-RARIHNLAAWI----KENNPDI--ICLQET--------------------KT 40
           TWNVN   RA    L +W+     E  PD+  +  QE                     K 
Sbjct: 532 TWNVNGGKRAGEEALHSWLIVPPGEMPPDVYAVGFQEIVDLTAGNIMNADDSHRTAWEKA 591

Query: 41  EDKNFPFETL---QSLNYH-IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFI- 95
                        Q  +Y  + +           +       +   + G        +  
Sbjct: 592 IKDTINSSVFPNGQPASYALVVSQQLVGVCLCIFVRSDSISHVRDVVIGKHKTGFGGYAG 651

Query: 96  -----EATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIF 150
                   F + + ++     +L  G    + +  D    + R      + +   + + +
Sbjct: 652 NKGAVAIRFRMYSTSICFVCAHLAAGQSNVTERNSDYADIMSRMSFGKGRVINNHDIVFW 711

Query: 151 AGDYNIIPQ-PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAI------RATHDTHH 203
            GD+N     P +     +   D     E  Q   + +N                   + 
Sbjct: 712 IGDFNYRIDLPKEEVEGCVKNGDLATLYEADQLRIQRENGAVFAGFVEAPIIFVPTYKYD 771

Query: 204 LYS-FWDYYADSWSKNKGIRIDHIMLSPEATSLL----HSARIDTKPRGWTKPSDHTPVI 258
           LYS  +D    + +             P     +     +  + T  R   K SDH PV 
Sbjct: 772 LYSDVFDTSEKARA-------------PAWCDRVLWRGENVDVLTYNRAELKSSDHRPVY 818

Query: 259 VSLDI 263
            + D+
Sbjct: 819 ATFDL 823


>gi|89076503|ref|ZP_01162817.1| Exodeoxyribonuclease III [Photobacterium sp. SKA34]
 gi|89047821|gb|EAR53417.1| Exodeoxyribonuclease III [Photobacterium sp. SKA34]
          Length = 268

 Score = 47.5 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/276 (14%), Positives = 80/276 (28%), Gaps = 25/276 (9%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQETK----------TEDKNFPFE 48
           + + T N +S +      ++  +A  I E + D+I LQE            +   NFP  
Sbjct: 1   MKLLTLNTHSWQEQDQLEKLDIVAKAIIEQDCDVIALQEVNQRYDSSIINASTVSNFP-- 58

Query: 49  TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108
            + S NY      +    G      +  +     +  + L   +R       +       
Sbjct: 59  -VHSDNYAYLLQQRLLVLGHQYYLTWDFVHQSYDVYQEGLAFLSREPVIEHQVIDLNDNY 117

Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168
              +  H   +  T    + +                                       
Sbjct: 118 DENHWKHRRAVRITLGYKEQTLDIYNCHCGWWNDVESPFQQHIERIQSCLSDRLSLFLGD 177

Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK-GIRIDHIM 227
           +   +    E      +   +    + +   D + +    D     W  N   +RID++ 
Sbjct: 178 FNTPSHLVDEGYSYLIQQGFIDTYTSAQMKDDGNTVVKCID----GWQNNHEALRIDYVF 233

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            + +    + S ++      +   SDH  +IVSLD+
Sbjct: 234 SNQDV--SVSSHKVIFNGDYYPIVSDHFGLIVSLDL 267


>gi|322517552|ref|ZP_08070421.1| RgfB protein [Streptococcus vestibularis ATCC 49124]
 gi|322123812|gb|EFX95386.1| RgfB protein [Streptococcus vestibularis ATCC 49124]
          Length = 271

 Score = 47.5 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/276 (10%), Positives = 70/276 (25%), Gaps = 26/276 (9%)

Query: 4   VTVATWNVNSIRARIH----NLAAWIKEN----NPDIICLQETKTEDKNFPFETLQ-SLN 54
           +   T N +S    +          +KE       DIIC QE    ++      ++    
Sbjct: 1   MKFLTLNTHS---WMEEDAEGKFQTLKEQILKAQYDIICFQEV---NQEIETAAVETDAY 54

Query: 55  YHIETCGQKSYNGVAIL---------SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT 105
           YH        +    +                    +  G D   +   + +   + +  
Sbjct: 55  YHALPSATPIHQDHFVRLLVEKLAEEGLQYHWTWAYNHIGYDHLNEGVAVLSRQPLTSSE 114

Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165
           + + ++  P           +     +     +      ++                   
Sbjct: 115 ILVSDVDDPTDYHTRRVAVAETTVDGREVAVASVHLSWWDKGFQEEWARIEGCFQSIGKP 174

Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225
            I+  +                 +   D+ +   +T+  Y+            + +RID+
Sbjct: 175 LILAGDFNNPAGREGYQAILASPLKLQDSFQVAQETNGSYTVGPGIDGWKGNEEPLRIDY 234

Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           +  S E    ++   +          SDH  +   L
Sbjct: 235 VFASQEWA--VNHLSVIFDGNNQPLVSDHYGLEAEL 268


>gi|149003378|ref|ZP_01828267.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae SP14-BS69]
 gi|147758561|gb|EDK65559.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae SP14-BS69]
          Length = 271

 Score = 47.5 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/272 (11%), Positives = 74/272 (27%), Gaps = 14/272 (5%)

Query: 4   VTVATWNVNSI--RARIHNL---AAWIKENNPDIICLQETK-------TEDKNFPFETLQ 51
           +   T N +S   +            I E + D+IC QE          E  +       
Sbjct: 1   MKFLTLNTHSWMEKEAEEKFQILLEDILEKDYDLICFQEINQEMTSSEVEVNDLYQALPA 60

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
           +   H +   +     ++   K        +  G +   +   I +   I T+ + + ++
Sbjct: 61  AEPIHQDHYVRLLVEKLSEQGKNYYWTWAYNHIGYNRYHEGVAILSKTPIETREILVSDV 120

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
             P           + +   K     +      ++                    ++  +
Sbjct: 121 DDPTDYHTRRVALAETVVDGKELAVASVHLSWWDKGFQEEWARFEAVLKKLNKPLLLAGD 180

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
                 +          +G  DA     +    Y+            + +RID++  + E
Sbjct: 181 FNNPAGQEGYQAILASPLGLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTTKE 240

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
               + +  +        + SDH  +   L+ 
Sbjct: 241 LA--VENLHVVFDGNKSPQVSDHYGLNAILNW 270


>gi|86146808|ref|ZP_01065128.1| putative phospholipase C precursor [Vibrio sp. MED222]
 gi|85835458|gb|EAQ53596.1| putative phospholipase C precursor [Vibrio sp. MED222]
          Length = 444

 Score = 47.5 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 43/285 (15%), Positives = 86/285 (30%), Gaps = 43/285 (15%)

Query: 2   SVVTVATWNVNSIRA-------RIHNLAAWIKENNPDIICLQETKTE-DKNFPFETLQSL 53
           + + V T+N+ ++ A       R   +  ++K    D++ LQE        F  E  +  
Sbjct: 179 NTLKVMTYNIWALPAIASHIGDRYDLIPQYVK--GYDVLALQEVFANGRDEFLRELSKEY 236

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
            Y  +   +   N             + +                         I N   
Sbjct: 237 PYQTKMLDKDGINIYDGGVIIVSRYPIVNEAQYVFPDCTGTDCFADKGVNYAEIIKNGQA 296

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
            H     +  +D   +   R         + ++    A    I       Y+     N  
Sbjct: 297 YHVFGTHTASFDTDTARDYRQ-------RQFKQMRQLAQSLEIPTSETVIYSGDFNVNKL 349

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYS--FWDYYADSWS-------KNKGIRID 224
            F  + +Q F  LQ             T+  Y+   +D   ++++       +N    +D
Sbjct: 350 KFPDDYQQMFANLQADE---------PTYSGYTASTFDPRINNFAGEPMSGGENVEY-LD 399

Query: 225 HIMLSPEATSLLHSA-RID------TKPRGWTKPSDHTPVIVSLD 262
           ++++S E     H+  R+D      ++       SDH PV   + 
Sbjct: 400 YVVVSSEYAQKTHNNNRVDVPRSTSSELWKHYNLSDHFPVSAVIK 444


>gi|325923708|ref|ZP_08185327.1| metal-dependent hydrolase [Xanthomonas gardneri ATCC 19865]
 gi|325545794|gb|EGD17029.1| metal-dependent hydrolase [Xanthomonas gardneri ATCC 19865]
          Length = 251

 Score = 47.5 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/250 (13%), Positives = 66/250 (26%), Gaps = 19/250 (7%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQP 76
           R   + A I++ +PD+   QE    ++   +       Y     G+++      +  +  
Sbjct: 20  RRTAMVALIEQAHPDVFGTQE--LVEEQAQYLAAHLPAYRWFGKGRRADGSDEHMGVFYD 77

Query: 77  IEIVTHLPGDDLDVQARFIEATFTINTQTL-RIGNLYLPHGNPITSTKYDDKISWIKRFL 135
             ++T +   D  +         +     L R+    L          Y     +  R  
Sbjct: 78  SRVLTVVESGDFWLSETPEIPGSSSWNTDLPRMATWALFERRSDKRRFYLFNTHFAHRDQ 137

Query: 136 RFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAI 195
             A++        +       +P          + +D         +             
Sbjct: 138 DEAAREHSA---RVILSRIATLPADIPVVVTGDFNSDPDNGTYRTLTAVLGDARAHATKR 194

Query: 196 RATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHT 255
           +    T   ++               RID I+     T             G   PSDH 
Sbjct: 195 QGPEKTFQDFTTHPTR----------RIDWILF-RGLTP--TRFSTLETRPGGILPSDHY 241

Query: 256 PVIVSLDIPE 265
           PV+     P+
Sbjct: 242 PVLAEFAWPQ 251


>gi|281353542|gb|EFB29126.1| hypothetical protein PANDA_003778 [Ailuropoda melanoleuca]
          Length = 131

 Score = 47.5 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 38/125 (30%), Gaps = 12/125 (9%)

Query: 157 IPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS 216
            P       P    +      E R     L  +      R  H     YSF+     ++S
Sbjct: 4   TPLSEIDRTPWQKLSKEKINKETRALNAILDQVDLIHIYRTPHPRTKEYSFYSNAHGTFS 63

Query: 217 KNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQ 276
                RIDH +      S      I          SDH  + + L+     K  ++S + 
Sbjct: 64  -----RIDHALGHKTGLSQYQKIEIIPCI-----FSDHNALKLELN--HKEKPGRNSNTW 111

Query: 277 NMKPI 281
            ++ I
Sbjct: 112 RLRTI 116


>gi|206560253|ref|YP_002231017.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           cenocepacia J2315]
 gi|198036294|emb|CAR52190.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           cenocepacia J2315]
          Length = 284

 Score = 47.5 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 17/38 (44%), Gaps = 4/38 (10%)

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           D + ++      +    ID    G  + SDH PV++ L
Sbjct: 250 DFVFVTDTLLPRVTRCEID----GNVRASDHQPVLLDL 283


>gi|156083036|ref|XP_001609002.1| endonuclease/exonuclease/phosphatase family domain containing
           protein [Babesia bovis T2Bo]
 gi|154796252|gb|EDO05434.1| endonuclease/exonuclease/phosphatase family domain containing
           protein [Babesia bovis]
          Length = 630

 Score = 47.5 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 41/94 (43%), Gaps = 8/94 (8%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTED-KNFPFETLQSLNYHIETCGQKS 64
           V +WN     +R   +   ++++  D++CLQE   E+ KNF      +L Y      +K+
Sbjct: 229 VMSWN-----SRKFAILDVLQQSEADVVCLQEVDEEEYKNFFLTEFLALGYGSYFKKKKT 283

Query: 65  Y--NGVAILSKYQPIEIVTHLPGDDLDVQARFIE 96
              +GV +L      E++ H   +     A +  
Sbjct: 284 PKLDGVCVLYNEDRFELLYHKDVEFAVHDADYDR 317


>gi|18407510|ref|NP_566121.1| endonuclease/exonuclease/phosphatase family protein [Arabidopsis
           thaliana]
 gi|4249410|gb|AAD13707.1| expressed protein [Arabidopsis thaliana]
 gi|21618284|gb|AAM67334.1| unknown [Arabidopsis thaliana]
 gi|109134181|gb|ABG25088.1| At2g48030 [Arabidopsis thaliana]
 gi|330255832|gb|AEC10926.1| endonuclease/exonuclease/phosphatase domain-containing protein
           [Arabidopsis thaliana]
          Length = 438

 Score = 47.5 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/281 (12%), Positives = 74/281 (26%), Gaps = 35/281 (12%)

Query: 13  SIRARIHNLAAWIKENNPDIICLQETKTEDKN---FPFETLQSLNY-HIETCGQKSYNGV 68
            +R+    L   + E + D++ LQ+ K ++ +      +   +L   ++         G 
Sbjct: 150 GLRSTRTAL-EVLSELDADVLALQDVKADEADQMRPLSDLAAALGMNYVFAESWAPEYGN 208

Query: 69  AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY---- 124
           AILSK+           D  D +     +     +  +     +L H +     K     
Sbjct: 209 AILSKWPIKSSNVLRIFDHTDFRNVLKASIEVPGSGEVEFHCTHLDHLDEKWRMKQVDAI 268

Query: 125 ----DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
               +                   E        Y  + +P      + +     +T    
Sbjct: 269 IQSTNVPHILAGALNSLDESDYSPERWTDIVKYYEEMGKPIPKAQVMRFLKSKEYTDAKD 328

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            + +    +                              G R+D+I+ S ++        
Sbjct: 329 FAGECESVVVVAKGQSVQGTCK----------------YGTRVDYILASSDSPYRFVPGS 372

Query: 241 IDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
                      SDH  V V       +    +   Q  +PI
Sbjct: 373 --YSVLSSKGTSDHHIVKVD----VVKATSINVNEQEQRPI 407


>gi|86742342|ref|YP_482742.1| endonuclease/exonuclease/phosphatase [Frankia sp. CcI3]
 gi|86569204|gb|ABD13013.1| Endonuclease/exonuclease/phosphatase [Frankia sp. CcI3]
          Length = 356

 Score = 47.5 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 7/41 (17%)

Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           +RIDH++ SP     +    +     G    SDH PVI  L
Sbjct: 320 LRIDHVLASPAFA--VTGFEV-----GGDFGSDHRPVIADL 353


>gi|242811890|ref|XP_002485845.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
 gi|218714184|gb|EED13607.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
          Length = 654

 Score = 47.5 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 20/56 (35%), Gaps = 3/56 (5%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278
           ID +  S    + + S   DTKP  W    DH P+    D+   R         N 
Sbjct: 181 IDLVWASHNLANRVVSC--DTKPEWWYGA-DHVPISTQFDLTAIRVPPLVRKQWNA 233


>gi|5924316|gb|AAD56548.1| carbon catabolite repression 4 protein homolog [Homo sapiens]
          Length = 431

 Score = 47.5 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/263 (15%), Positives = 68/263 (25%), Gaps = 28/263 (10%)

Query: 21  LAAWIKENNPDIICLQETKTEDKNFPFE--TLQSLNYHIETCGQKSYNGVAILSKYQPIE 78
           +   I    PDI+CLQE    D  F      L  L Y      +         S    +E
Sbjct: 179 ILEEILAYQPDILCLQEV---DHYFDTFQPLLSRLGYQGTFFPKP-------WSPCLDVE 228

Query: 79  IVTHLPGD--DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
                 G           +  +  I    + +    +     +   +   +       L+
Sbjct: 229 HNNGPDGCALFFLQNRFKLVNSANIRLTAMTLKTNQVAIAQTLECKESGRQFCIAVTHLK 288

Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL-EVRQSFQKLQNMGFTDAI 195
             +               N+         P+I   D      E         N+    A 
Sbjct: 289 ARTGWERFRSAQGCDLLQNLQNITQGAKIPLIVCGDFNAEPTEEVYKHFASSNLNLNSAY 348

Query: 196 R---ATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP------EATSLLHSARIDTKPR 246
           +   A   +   Y+ W        ++    +D+I  S        A  LL   +I     
Sbjct: 349 KLLSADGQSEPPYTTWKIRTSGECRHT---LDYIWYSKHALNVRSALDLLTEEQIGPNRL 405

Query: 247 -GWTKPSDHTPVIVSLDIPEPRK 268
             +  PSDH  ++      E   
Sbjct: 406 PSFNYPSDHLSLVCDFSFTEESD 428


>gi|83747941|ref|ZP_00944972.1| dioxygenase [Ralstonia solanacearum UW551]
 gi|207743451|ref|YP_002259843.1| metal-dependent hydrolase protein [Ralstonia solanacearum IPO1609]
 gi|83725359|gb|EAP72506.1| dioxygenase [Ralstonia solanacearum UW551]
 gi|206594848|emb|CAQ61775.1| metal-dependent hydrolase protein [Ralstonia solanacearum IPO1609]
          Length = 289

 Score = 47.5 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/300 (11%), Positives = 75/300 (25%), Gaps = 52/300 (17%)

Query: 1   MSVVTVATWNV------NSIRARIHNLAAWIKENNP-DIICLQETKTEDKNFP------- 46
           M  + + TWN+      +  R  +  + A      P DI+CLQE  +   + P       
Sbjct: 1   MGTI-ILTWNIQWGRGADG-RVDLPRMLAEAHAMGPFDILCLQEITSGFGHLPGQPGDDQ 58

Query: 47  -FETLQSLNYHI----------ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFI 95
             E   +L                  +    G AI+++   + +  H      D      
Sbjct: 59  WRELAGTLGPAFTLIDGIALERHEGTRIQRFGNAIVTRLPVLHVARHALPCPADTSPTMP 118

Query: 96  EATF-----------TINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL 144
                           + +  L   +                +                 
Sbjct: 119 RMAIEATVQAPFGPLRVISTHLEYYSETQRIAQIDALRALHVEGWMRAAHPPTLGPEPAD 178

Query: 145 EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL 204
                 A  +  +        P              ++                  T  +
Sbjct: 179 GPFRPLAQTHATVICGDFNCKPDSTPKRLATVPFSHETATLYDAWEVAHGTAPQPPTFGV 238

Query: 205 Y--SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
           +  + W   A +         D +++S    + +    ++      T+ SDH P+++ L+
Sbjct: 239 HDRTGWTEPAYA--------CDFMLVSEPLKTRVARVEVN----SVTQASDHQPMLLELN 286


>gi|326801928|ref|YP_004319747.1| endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21]
 gi|326552692|gb|ADZ81077.1| Endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21]
          Length = 310

 Score = 47.5 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 46/300 (15%), Positives = 82/300 (27%), Gaps = 59/300 (19%)

Query: 6   VATWNV------------NSIRARIHNLAAWIKENNPDIICLQE-TKTEDKNFPFETLQS 52
           VAT+N+            +  + R   +A  I+ +  DI   QE    + ++    +L +
Sbjct: 29  VATYNIRNDNNKEDAARGDGWKQRYPIIADLIRFHEFDIFGTQEGLYHQLEDL-KSSLPN 87

Query: 53  LNYH-IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
            NY  +     K     + +        +       L  Q  +    +      +     
Sbjct: 88  YNYTGVGRDDGKQAGEYSAIFYNTEKFDLLDHGDFWLSTQTDYPNKGWDAVLPRICSWAK 147

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
                N  T   ++     +    R  S +L L +    AG++  I       +      
Sbjct: 148 LQVKANGKTLYFFNVHFDHVGTTARKESAKLILSKVKELAGNHTAILTGDFNVDQHSNSY 207

Query: 172 DA--CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
                  +                     +      S               RIDHI L+
Sbjct: 208 QVLEQSHILQDAFEAAPFRYVTNGTFNNFNPNSKTDS---------------RIDHIFLT 252

Query: 230 PEATSLLHSARID---------------------TKPRGWTK----PSDHTPVIVSLDIP 264
            +    +H   I                       + R        PSDH PV++SLD+P
Sbjct: 253 TDF--KVHKYGILTDTYRSTLQNPQEAYQSGNFPKEVRLTDHRARVPSDHFPVMISLDMP 310


>gi|310790575|gb|EFQ26108.1| endonuclease/Exonuclease/phosphatase [Glomerella graminicola
           M1.001]
          Length = 300

 Score = 47.5 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/240 (12%), Positives = 58/240 (24%), Gaps = 15/240 (6%)

Query: 32  IICLQET-KTEDKNFPFETLQSLNYHIETCGQKSYNGVAI-LSKYQPIEIVTHLPGDDLD 89
            ICLQE   ++ ++       +  Y           G    +                L 
Sbjct: 61  FICLQEVLYSQIEDVQSYLGSAWGYIGLGRDDGKRGGEFSPVFYQVDRWKCERSETLWLS 120

Query: 90  VQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLI 149
                    +      +     +L                      R  S +L L     
Sbjct: 121 KTPEKPSRGWDAALNRVVTVGEFLDKATDTRVVVMSTHFDHQGVVAREESAKLLLRIARE 180

Query: 150 FAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY---- 205
           +    N  P        ++   D   T E       +        +         Y    
Sbjct: 181 WGKGANGKPP-----TAVLLAGDFNSTPEDNAYKTMVAPESGMVDVSTQVPEEKRYGNKL 235

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT-KPSDHTPVIVSLDIP 264
           ++  +          +RID + +   +   + +  + +         SDH PV+  ++IP
Sbjct: 236 TYTSFNEPDEEP---LRIDFLFVKDPSPVTIKTFGVLSNKFDDDVYLSDHRPVVADIEIP 292


>gi|254788112|ref|YP_003075541.1| endonuclease/exonuclease/phosphatase family protein [Teredinibacter
           turnerae T7901]
 gi|237685110|gb|ACR12374.1| endonuclease/exonuclease/phosphatase family protein [Teredinibacter
           turnerae T7901]
          Length = 250

 Score = 47.5 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 45/272 (16%), Positives = 80/272 (29%), Gaps = 33/272 (12%)

Query: 2   SVVTVATWNVN-SIRA-----RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55
             V + T N++    A      +H L   ++E +PD++ LQE   E + F     +  + 
Sbjct: 4   RKVKILTVNMHKGFNAFNRRFTLHELREALREIDPDVVFLQEVLGEHRQF---ATRYTDL 60

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
             E    +        +       V         + +RF    +  +  +L         
Sbjct: 61  WPEQSQYEFLADQVWSAHAYGRNAVYPHGHHGNALLSRFPIDRWHNHDISLSGIEKR--- 117

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
           G         ++            +     +    +   N +P                F
Sbjct: 118 GLLYCHLNLGEQKLHAICVHLSLRESHRQIQLKRLSKLVNSLPADEPVVVA------GDF 171

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
                ++   L N          H      SF             +R+D I L       
Sbjct: 172 NDWRLKAENLLFNESRLVDAYTGHQGKPARSFPVAMPL-------LRLDRIYL------R 218

Query: 236 LHS-ARIDTKPRG-WTKPSDHTPVIVSLDIPE 265
            +S   I+   R  W++ SDH P++V LDI E
Sbjct: 219 CNSRYEIERLHRSPWSRISDHKPLMVELDIQE 250


>gi|228995361|ref|ZP_04155046.1| Endonuclease/exonuclease/phosphatase [Bacillus pseudomycoides DSM
           12442]
 gi|228764403|gb|EEM13266.1| Endonuclease/exonuclease/phosphatase [Bacillus pseudomycoides DSM
           12442]
          Length = 354

 Score = 47.5 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/270 (14%), Positives = 83/270 (30%), Gaps = 39/270 (14%)

Query: 20  NLAAWIKENNPDIICLQE-------------TKTEDKNFPFETLQSLNYHIETCGQK--- 63
           N+ +++++ + D I +QE              K        +   +  Y+          
Sbjct: 97  NMLSFLQKEDSDFILVQEMDEKSLRSFDVNQYKAFQDGL-KDHASTFGYNFNAQWVPVPI 155

Query: 64  ------SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
                 + +G+   SKY+  E+  +          +  E    I  Q + + N       
Sbjct: 156 KKPHGYTNSGLGSFSKYKVEEVTRYQLPGREMWLRQLFELDRAIVEQKVPVDNGKYLRMV 215

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
            +  + YD   +  K+ + F  + +         GDY ++    +     +   D  F  
Sbjct: 216 NVHLSAYDKGGNIRKQQVEFLKEYMNKHYKN---GDYLVLGGDWNQLLSDVQLKDPKFKE 272

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW----SKNKGIRIDHIMLSPEAT 233
           E  +   +L         +   D     + W    +       +N    ID  ++SP   
Sbjct: 273 EWPEWLVQLPEDFTDGGFQWAVDD----TVWTVRDNVKSYVEDENFVTIIDGFLVSPN-- 326

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             +    +      +   SDH PV   L +
Sbjct: 327 --VEIVSVQGHDLKFEN-SDHNPVNAVLKL 353


>gi|186474192|ref|YP_001861534.1| endonuclease/exonuclease/phosphatase [Burkholderia phymatum
          STM815]
 gi|184196524|gb|ACC74488.1| Endonuclease/exonuclease/phosphatase [Burkholderia phymatum
          STM815]
          Length = 250

 Score = 47.5 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 5/40 (12%)

Query: 4  VTVATWNVNSI----R-ARIHNLAAWIKENNPDIICLQET 38
          + +ATWN++      R A    +   I+E + DI+ LQE 
Sbjct: 21 LRIATWNIHGTVGTDRFASPERIGRVIRELDADIVALQEV 60


>gi|330812030|ref|YP_004356492.1| putative endonuclease [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327380138|gb|AEA71488.1| putative endonuclease [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 269

 Score = 47.5 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/256 (12%), Positives = 67/256 (26%), Gaps = 37/256 (14%)

Query: 15  RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKY 74
           R  +  L   ++  + D++ LQE     ++ P                         S +
Sbjct: 44  RFILPELREAVRSVSADVVFLQEVHGTHEHHP--------QRYSNWPSMPQYEFLADSLW 95

Query: 75  QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST---KYDDKISWI 131
                  +      D     +     I    L +      +   + S      D      
Sbjct: 96  PQFAYGRNAVYPAGDHGNALLSKFQIIRHDNLDVSISGHENRGMLHSVLRLPGDGPQVHA 155

Query: 132 KRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY---NPIIWENDACFTLEVRQSFQKLQN 188
                   +   +E+  +     + +P         +   W   A   LE     +    
Sbjct: 156 ICVHLGLREGHRVEQLKLLCQRLSELPPDAPVIVAGDFNDWRGKASELLEPCGLREVFAE 215

Query: 189 MGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPEATSLLHSARIDTKPRG 247
                              W   A S+  +   +R+D I +        H  ++    R 
Sbjct: 216 Q------------------WGKPARSFPARLPILRLDRIYV-RNL--KAHHPKVL-NVRP 253

Query: 248 WTKPSDHTPVIVSLDI 263
           W+  SDH P+ V +++
Sbjct: 254 WSHLSDHAPLSVEIEL 269


>gi|118764500|emb|CAJ13350.2| pol protein [Drosophila simulans]
          Length = 902

 Score = 47.5 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/277 (14%), Positives = 76/277 (27%), Gaps = 31/277 (11%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + +  WN   I  +I+ L A+IK+ +  I+ + ET+ E        L    +H     
Sbjct: 12  NTLKIGYWNSCGITNKINELEAYIKKEDIQIMLVTETRLERN---SNALNFKGFHTYLAQ 68

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
             + +     +      I             +        +     I             
Sbjct: 69  NPTSHRKGGTATIVNQNIRHTCLNPIETDFMQSAPIALIPSNH---IRANMTIVAPIYCP 125

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
             +        +        L+ +   I  GD+N        +   +         +   
Sbjct: 126 PVFKWTTEQFSKLFNHFDTLLDGKTKFILGGDWNCKH---RLWGNFLSCAKGRSLSQSIL 182

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           + + L  +    A     D     S                +D  +     T  L +   
Sbjct: 183 ARKDLDIVATGQATHFPFDKKKQPSA---------------LDFAICKGFHTKRLKTYST 227

Query: 242 DTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278
           D         SDH P+ + LD PE    Q ++T+ N 
Sbjct: 228 D------ELSSDHLPIQIVLD-PEDTDWQLNNTTNNA 257


>gi|26353944|dbj|BAC40602.1| unnamed protein product [Mus musculus]
          Length = 212

 Score = 47.5 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 31/97 (31%), Gaps = 5/97 (5%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73
           R  N+   IK  + D++CLQE   ++ ++  E    L+SL YH E   +           
Sbjct: 31  RFPNILKEIKHFDADVLCLQEV--QEDHYGTEIRPSLESLGYHCEYKMKTGRKPDGCAIC 88

Query: 74  YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
           ++               +              L +  
Sbjct: 89  FKHSRFSLLSVNPVEFCRRDIPLLDRDNIGLVLLLQP 125


>gi|291514150|emb|CBK63360.1| Metal-dependent hydrolase [Alistipes shahii WAL 8301]
          Length = 539

 Score = 47.5 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 29/265 (10%)

Query: 7   ATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57
            ++N+         N  + R   +   I    P I+ LQE   +     +   Q   Y  
Sbjct: 283 ISFNIRVDNPSDGDNIWKNRKQAVITMINRQQPTIMGLQE--AQPHQITYLAKQCPEYAW 340

Query: 58  E----TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
                  G+         S+            + LD    ++  T  I ++         
Sbjct: 341 YGLGRDTGEAPPKTETYASEECMAIFFQTSIVEMLDKGTFWLSETPNIPSKGWDANYNRS 400

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
                        +  +    L  +      E   +       +             N  
Sbjct: 401 CTWALFRQKTTGKRFYFFNTHLDNSGAVARKESIKLIINKIEEVNSEQLPVFLTADFNSD 460

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR-IDHIMLSPEA 232
                     Q +++   T  +     T++ Y           K  G R +DHI      
Sbjct: 461 TDESCFNPLHQVMKDARATAPVTDQEATYNGY-----------KTSGTRKLDHIFYDNGC 509

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPV 257
            + +   +   +  G    SDH PV
Sbjct: 510 VASI--FQTLKENYGAPYISDHYPV 532


>gi|154270260|ref|XP_001535986.1| predicted protein [Ajellomyces capsulatus NAm1]
 gi|150410057|gb|EDN05445.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 987

 Score = 47.5 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 28/75 (37%), Gaps = 8/75 (10%)

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           + W           G  ID   LSP     L    I  +     K SDH P+  +L++  
Sbjct: 467 TTWQDRGSP-----GTTIDLTFLSPLLHDKLRRCAIAEEA---CKGSDHKPMETTLELTP 518

Query: 266 PRKKQQDSTSQNMKP 280
             K+ +    +N +P
Sbjct: 519 IPKEAERRNWKNAEP 533


>gi|154287936|ref|XP_001544763.1| predicted protein [Ajellomyces capsulatus NAm1]
 gi|150408404|gb|EDN03945.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 359

 Score = 47.5 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 28/75 (37%), Gaps = 8/75 (10%)

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           + W           G  ID   LSP     L    I  +     K SDH P+  +L++  
Sbjct: 78  TTWQDRGSP-----GTTIDLTFLSPLLHDKLRRCAIAEEA---CKGSDHKPMETTLELTP 129

Query: 266 PRKKQQDSTSQNMKP 280
             K+ +    +N +P
Sbjct: 130 IPKEAERRNWKNAEP 144


>gi|154271554|ref|XP_001536630.1| predicted protein [Ajellomyces capsulatus NAm1]
 gi|150409300|gb|EDN04750.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 1163

 Score = 47.5 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 28/75 (37%), Gaps = 8/75 (10%)

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           + W           G  ID   LSP     L    I  +     K SDH P+  +L++  
Sbjct: 467 TTWQDRGSP-----GTTIDLTFLSPLLHDKLRRCAIAEEA---CKGSDHKPMETTLELTP 518

Query: 266 PRKKQQDSTSQNMKP 280
             K+ +    +N +P
Sbjct: 519 IPKEAERRNWKNAEP 533


>gi|88854566|ref|ZP_01129233.1| hypothetical protein A20C1_10119 [marine actinobacterium PHSC20C1]
 gi|88816374|gb|EAR26229.1| hypothetical protein A20C1_10119 [marine actinobacterium PHSC20C1]
          Length = 302

 Score = 47.5 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 73/274 (26%), Gaps = 46/274 (16%)

Query: 6   VATWNVNSIRARIHNLA---------------AWIKENNPDIICLQETKTEDKNFPFETL 50
           V ++N   IR R+  L                  +    P ++ +QE       F     
Sbjct: 43  VMSYN---IRRRLPKLLPRNPDQWRHRQPLMRRLLAAEQPALVGVQE-----ALFTQARF 94

Query: 51  --QSLNYHIETCGQKSYNGVA-----ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
             Q+L  H  + G             I    + +++V        D        ++   T
Sbjct: 95  VRQALGEHYRSLGYGRERNTGGEGCPIFYDSRRLQVVDWHQSALSDTPNVPGSTSWGNRT 154

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
             + +  ++      I     +  +    R  R  S                  P P   
Sbjct: 155 PRVVVEAIFRDLATGIHFQAVNTHLDHRSRTSRLRSADALRN-------IVQATPHPTIM 207

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223
                 + D     E+      +      +            +F +Y      +    RI
Sbjct: 208 TGDFNTDADTHPYDELTGHGLLVDTWNTAEERLTQVWG----TFPNYGPPKHDRK---RI 260

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257
           D I+ +P  T     A I+        PSDH PV
Sbjct: 261 DWILATPGVT--AVRAGINVTRYAGGWPSDHAPV 292


>gi|301780562|ref|XP_002925696.1| PREDICTED: sphingomyelin phosphodiesterase 2-like [Ailuropoda
           melanoleuca]
 gi|281346608|gb|EFB22192.1| hypothetical protein PANDA_015236 [Ailuropoda melanoleuca]
          Length = 423

 Score = 47.5 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/300 (12%), Positives = 78/300 (26%), Gaps = 43/300 (14%)

Query: 4   VTVATWNVNSI------RA-RIHNLAAWIKENNPDIICLQETKTEDK-----NFPFETLQ 51
           + +   N   I      RA R+  L  ++   + D+  L+E  +E            T  
Sbjct: 9   LRLFNLNCWGIPYLSKHRADRMKRLGDFLNMESFDLALLEEVWSEQDFQYLRQKLSPTYP 68

Query: 52  SLNYH-----------IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT 100
           + +Y                  + +          P  I          V    +     
Sbjct: 69  AAHYFRSGVIGSGLCIFSKHPIQEFTQHVYTLNGYPYMIHHGDWFCGKAVGLLVLRLGGL 128

Query: 101 INTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP 160
                +   +      +         +++      +F     +  + ++  GD N+ P+ 
Sbjct: 129 ELNAYVTHLHAEY---SRQKDIYLTHRVAQAWELAQFIHHTSKKADVVLLCGDLNLHPKD 185

Query: 161 HDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG 220
             C     W       LE R      +           +                    G
Sbjct: 186 LGCRLLKEWTGLHDAYLETRDFKGSEEGCTMVPENCYVNQRELE-----------PFPFG 234

Query: 221 IRIDHIMLSPEATSLLHSARIDT-----KPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTS 275
           IRID+++     +    S +         P   T  SDH  ++ +L +     +   S +
Sbjct: 235 IRIDYVLY-KAVSGFYISCKTLRTTTGRDPHSGTPLSDHEALMATLCVRHSPPQHIPSPT 293


>gi|212539902|ref|XP_002150106.1| reverse transcriptase, putative [Penicillium marneffei ATCC 18224]
 gi|210067405|gb|EEA21497.1| reverse transcriptase, putative [Penicillium marneffei ATCC 18224]
          Length = 1318

 Score = 47.5 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 19/58 (32%), Gaps = 4/58 (6%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
           ID ++ S E    +    I     G    SDH  +    DI  P +   +       P
Sbjct: 383 IDLVLASTELAEEMVKCGIHYTNHG----SDHQAIETEFDISVPERPITERLLWKNAP 436


>gi|148700527|gb|EDL32474.1| Traf and Tnf receptor associated protein, isoform CRA_d [Mus
           musculus]
          Length = 349

 Score = 47.5 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 43/280 (15%), Positives = 78/280 (27%), Gaps = 51/280 (18%)

Query: 2   SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           S ++  TWN++ +       RAR   + + +   +PD++ LQE        P        
Sbjct: 101 STISFITWNIDGLDGCNLPERAR--GVCSCLALYSPDVVFLQEV------IPP------- 145

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           Y      + +   +   ++      +    G         I    T   + L   N+ L 
Sbjct: 146 YCAYLKKRAASYTIITGNEEGYFTAILLKKGRVKFKSQEIIPFPNTKMMRNLLCVNVSLG 205

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
                  T + +             + +  +             Q       +I+  D  
Sbjct: 206 GNEFCLMTSHLESTREHSAERIRQLKTVLGKM------------QEAPDSTTVIFAGDTN 253

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI--------DHI 226
              +       L +  F          H  Y+ WD  A     N  +RI        D I
Sbjct: 254 LRDQEVIKCGGLPDNVFDAWEFLGKPKHCQYT-WDTKA-----NNNLRIPAAYKHRFDRI 307

Query: 227 MLSPE---ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
               E               K      PSDH  ++ +L++
Sbjct: 308 FFRAEEGHLIPQSLDLVGLEKLDCGRFPSDHWGLLCTLNV 347


>gi|34809536|gb|AAQ82689.1| Isc1p [Candida glabrata]
          Length = 436

 Score = 47.5 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/307 (12%), Positives = 82/307 (26%), Gaps = 47/307 (15%)

Query: 4   VTVATWNVNSI-------RARIHNLAAWIKEN---------------------NPDIICL 35
           +   T+N   +       RAR+  LA  +  +                     + DI+ L
Sbjct: 9   IKFLTFNTWGLKYVSKHRRARLRALAEKLAGHQNSNIKSLPNSEDLYADDDFEDYDIVAL 68

Query: 36  QETKTEDK----------NFPFETLQSLNY-------HIETCGQKSYNGVAILSKYQPIE 78
           QE   ++            FP+     L Y       + +                +P  
Sbjct: 69  QEIWCKEDWDYIVEQCGKIFPYYRWFYLEYCQALDWQYFQKFRLNQRFLYRYPINGRPSA 128

Query: 79  IVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYD-DKISWIKRFLRF 137
           I          +    +       T  + + +      +      Y   +      F + 
Sbjct: 129 IHRGDWYVGKSIAITTLRNRENPTTPIVIMNSHMHAPYSLTGDAAYSCHRSCQAWDFAKL 188

Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA 197
           A    E    ++  GD N  P                   ++       +        + 
Sbjct: 189 AKIYREAGYAVVIVGDLNSRPGSLPHNILTKEAGLIDSWEQLHGKQDLEKIRTMNAMDQL 248

Query: 198 THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK-PRGWTKPSDHTP 256
            +      S  + +  +   ++  R+D+ ++ P   + + +    T+   G    SDH  
Sbjct: 249 VYACTTCDSTLNTWRATRRPDEACRLDYALVDPRRLTTIKTGIKFTELIDGVGSFSDHFA 308

Query: 257 VIVSLDI 263
              +L++
Sbjct: 309 YSCTLEV 315


>gi|74198542|dbj|BAE39751.1| unnamed protein product [Mus musculus]
          Length = 326

 Score = 47.5 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 43/280 (15%), Positives = 78/280 (27%), Gaps = 51/280 (18%)

Query: 2   SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           S ++  TWN++ +       RAR   + + +   +PD++ LQE        P        
Sbjct: 78  STISFITWNIDGLDGCNLPERAR--GVCSCLALYSPDVVFLQEV------IPP------- 122

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           Y      + +   +   ++      +    G         I    T   + L   N+ L 
Sbjct: 123 YCAYLKKRAASYTIITGNEEGYFTAILLKKGRVKFKSQEIIPFPNTKMMRNLLCVNVSLG 182

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
                  T + +             + +  +             Q       +I+  D  
Sbjct: 183 GNEFCLMTSHLESTREHSAERIRQLKTVLGKM------------QEAPDSTTVIFAGDTN 230

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI--------DHI 226
              +       L +  F          H  Y+ WD  A     N  +RI        D I
Sbjct: 231 LRDQEVIKCGGLPDNVFDAWEFLGKPKHCQYT-WDTKA-----NNNLRIPAAYKHRFDRI 284

Query: 227 MLSPE---ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
               E               K      PSDH  ++ +L++
Sbjct: 285 FFRAEEGHLIPQSLDLVGLEKLDCGRFPSDHWGLLCTLNV 324


>gi|9507213|ref|NP_062424.1| tyrosyl-DNA phosphodiesterase 2 [Mus musculus]
 gi|67462082|sp|Q9JJX7|TYDP2_MOUSE RecName: Full=Tyrosyl-DNA phosphodiesterase 2; Short=Tyr-DNA
           phosphodiesterase 2; AltName: Full=5'-tyrosyl-DNA
           phosphodiesterase; Short=5'-Tyr-DNA phosphodiesterase;
           AltName: Full=TRAF and TNF receptor-associated protein
 gi|8247283|emb|CAB92971.1| putative TRAF and TNF receptor associated protein [Mus musculus]
 gi|56237843|emb|CAI26084.1| Traf and Tnf receptor associated protein [Mus musculus]
 gi|124376774|gb|AAI32512.1| TRAF and TNF receptor associated protein [Mus musculus]
 gi|124376776|gb|AAI32514.1| TRAF and TNF receptor associated protein [Mus musculus]
 gi|148700528|gb|EDL32475.1| Traf and Tnf receptor associated protein, isoform CRA_e [Mus
           musculus]
          Length = 370

 Score = 47.5 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 43/280 (15%), Positives = 78/280 (27%), Gaps = 51/280 (18%)

Query: 2   SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           S ++  TWN++ +       RAR   + + +   +PD++ LQE        P        
Sbjct: 122 STISFITWNIDGLDGCNLPERAR--GVCSCLALYSPDVVFLQEV------IPP------- 166

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           Y      + +   +   ++      +    G         I    T   + L   N+ L 
Sbjct: 167 YCAYLKKRAASYTIITGNEEGYFTAILLKKGRVKFKSQEIIPFPNTKMMRNLLCVNVSLG 226

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
                  T + +             + +  +             Q       +I+  D  
Sbjct: 227 GNEFCLMTSHLESTREHSAERIRQLKTVLGKM------------QEAPDSTTVIFAGDTN 274

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI--------DHI 226
              +       L +  F          H  Y+ WD  A     N  +RI        D I
Sbjct: 275 LRDQEVIKCGGLPDNVFDAWEFLGKPKHCQYT-WDTKA-----NNNLRIPAAYKHRFDRI 328

Query: 227 MLSPE---ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
               E               K      PSDH  ++ +L++
Sbjct: 329 FFRAEEGHLIPQSLDLVGLEKLDCGRFPSDHWGLLCTLNV 368


>gi|299145368|ref|ZP_07038436.1| putative transmembrane endonuclease/exonuclease/phosphatase family
           protein [Bacteroides sp. 3_1_23]
 gi|298515859|gb|EFI39740.1| putative transmembrane endonuclease/exonuclease/phosphatase family
           protein [Bacteroides sp. 3_1_23]
          Length = 366

 Score = 47.5 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 45/272 (16%), Positives = 82/272 (30%), Gaps = 33/272 (12%)

Query: 3   VVTVATWNVNSIR------ARIHNLAAWIKENNPDIICLQETKTEDK---NFPFETLQSL 53
           ++TVAT+NV++        +    +A++++    DI+C QE    D+   +     L   
Sbjct: 109 ILTVATYNVDAFNHEHTGYSC-KEIASYMRNLQADILCFQEFGINDEFGVDSIAAVLSDW 167

Query: 54  NYHIETCGQKSYNGV------AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107
            Y+      +  N +          K + + +        L         T  +    L+
Sbjct: 168 PYYYIPISPEGKNLLQLAVFSRYPIKEENLIVYPDSKNCSLWCDIETNARTIRLFNNHLQ 227

Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167
              +           + DD     +  L       E         +          Y  I
Sbjct: 228 TTEVSQNKRKLEKGLRTDDSQRVERAALGLIDGLHENFRKRAVQANTLKQLIAASPYPTI 287

Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227
           I   D               +        + H    +Y+F       + K+  +RID+I+
Sbjct: 288 I-CGDFNSLPSSYVYHTVKGDKLQDGFQTSGHGY--MYTF------KFFKHL-LRIDYIL 337

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
            SPE  S                 SDH PV++
Sbjct: 338 HSPEVNST-------DYFSPDLTYSDHNPVVM 362


>gi|270293069|ref|ZP_06199280.1| RgfB protein [Streptococcus sp. M143]
 gi|270279048|gb|EFA24894.1| RgfB protein [Streptococcus sp. M143]
          Length = 271

 Score = 47.5 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/273 (11%), Positives = 79/273 (28%), Gaps = 16/273 (5%)

Query: 4   VTVATWNVNSI--RARIHNLAAWIKEN---NPDIICLQETK-------TEDKNFPFETLQ 51
           +   T N +S   +         +++    + D+IC QE          E  +       
Sbjct: 1   MKFLTLNTHSWMEKEAEEKFQLLLQDILDKDYDLICFQEINQEITSPEVEVDHLYQALPA 60

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
           +   H +   +     ++   K        +  G D   +   I +   I  + + + ++
Sbjct: 61  AEPIHQDHYVRLLVEKLSEKGKNYYWTWAYNHIGYDRYHEGVAILSKTPIKAREILVSDV 120

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG-DYNIIPQPHDCYNPIIWE 170
             P           + +   K     +       +        +  + +  +    +  +
Sbjct: 121 DDPTDYHTRRVALAETVVEGKELALASVHLSWWNKGFQEEWARFEDVLKDLNKPLILAGD 180

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230
            +     E  Q+      +   DA     +    Y+            + +RID++  + 
Sbjct: 181 FNNPAGQEGYQAILASP-LDLQDAFEVAKERSGSYTVPPEIDGWKGNTEPLRIDYVFTTK 239

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           E    + S  +    +   + SDH  +   L+ 
Sbjct: 240 ELE--VESLHVVFDGQNSPQVSDHYGLNAVLNW 270


>gi|73984049|ref|XP_540938.2| PREDICTED: similar to CCR4 carbon catabolite repression 4-like
           [Canis familiaris]
          Length = 474

 Score = 47.5 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/263 (14%), Positives = 65/263 (24%), Gaps = 28/263 (10%)

Query: 21  LAAWIKENNPDIICLQETKTEDKNFPFE--TLQSLNYHIETCGQKSYNGVAILSKYQPIE 78
           +   I    PDI+CLQE    D  F      L  L Y      +         S    +E
Sbjct: 222 ILEEILAYQPDILCLQEV---DHYFDTFQPLLSRLGYQGTFFPKP-------WSPCLDVE 271

Query: 79  IVTHLPGD--DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
                 G           +  +  I    + +    +     +   +   +       L+
Sbjct: 272 HNNGPDGCALFFLQNRFKLVNSANIRLTAMTLKTNQVAIVQTLECKESSRQFCIAVTHLK 331

Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN----MGFT 192
             +               N+         P+I   D               +        
Sbjct: 332 ARTGWERFRSAQGCDLLQNLQNITQGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAY 391

Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS------PEATSLLHSARIDTKPR 246
             + A   +   Y+ W        ++    +D+I  S        A  LL   +I     
Sbjct: 392 KLLSADGQSEPPYTTWKIRTSGECRHT---LDYIWYSKHALSVKSALDLLTEEQIGPNRL 448

Query: 247 -GWTKPSDHTPVIVSLDIPEPRK 268
             +  PSDH  ++      E   
Sbjct: 449 PSFNYPSDHLSLVCDFSFNEEPD 471


>gi|305666984|ref|YP_003863271.1| putative secreted protein [Maribacter sp. HTCC2170]
 gi|88709217|gb|EAR01451.1| probable secreted protein [Maribacter sp. HTCC2170]
          Length = 258

 Score = 47.5 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/271 (12%), Positives = 76/271 (28%), Gaps = 51/271 (18%)

Query: 3   VVTVATWNV-------NSIRARIHNLAAWIKENNPDIICLQET-----KTEDKNFPFETL 50
            + V ++N+       N     +  +A  I + NPD++ LQE      + +  + P E  
Sbjct: 23  TLRVMSFNILHGATTKNDFN--LDTIAGVINKYNPDLVALQEVDFKTNRAKKYDLPTEI- 79

Query: 51  QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
                 + +   ++            +  +T +  +++ +               ++  N
Sbjct: 80  -GFRTKMASLFARAMYYDGGEYGEAVLSNLTFIGSENISLPHLPTSEPRAALLTRVKTRN 138

Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170
             +            D    + +           + P +  GD N  P            
Sbjct: 139 GNIIQFVGTHLDHLRDDTDRLMQAKAINEALGSTKYPTLLVGDLNDGPNSETIRILSENF 198

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230
           +      +++ + +K                                     +DHI+L+ 
Sbjct: 199 HK----PQLQAAKKKTWPADEPKVC---------------------------LDHILLTN 227

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
                +    ID +       SDH  V+ +L
Sbjct: 228 PKKWKV----IDYEVICENYASDHCIVVATL 254


>gi|241723616|ref|XP_002413718.1| hypothetical protein IscW_ISCW012237 [Ixodes scapularis]
 gi|215507534|gb|EEC17026.1| hypothetical protein IscW_ISCW012237 [Ixodes scapularis]
          Length = 232

 Score = 47.5 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 33/111 (29%), Gaps = 5/111 (4%)

Query: 9   WNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGV 68
           WN N +R R+  +   +     D++ +QE K          L    Y + TC     N  
Sbjct: 83  WNSNGLRGRLAQVRDELSRRPYDVLLIQEPKA-----DVADLNISGYTLHTCCGAKKNPC 137

Query: 69  AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
           AI      +        D    +A  +        Q   +   Y+      
Sbjct: 138 AIPYVNNSLPHCGIDTRDYCSARAEIVGVRIRRGEQEFSVFTCYVHLVGQW 188



 Score = 44.8 bits (104), Expect = 0.012,   Method: Composition-based stats.
 Identities = 20/220 (9%), Positives = 50/220 (22%), Gaps = 19/220 (8%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL---NYHIETCGQ 62
           +  WN+N +  R+ ++   +     D++ +QE K E          S             
Sbjct: 21  ILQWNINGLCGRLAHVRDELLRRPYDVLLIQEPKLEASKLDISGYTSYTCCGAKKHPWAV 80

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
             +N   +  +   +                  E    +    +    L+   G      
Sbjct: 81  LYWNSNGLRGRLAQV---RDELSRRPYDVLLIQEPKADVADLNISGYTLHTCCGAKKNPC 137

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                 + +                ++      I     +      + +          +
Sbjct: 138 AIPYVNNSLPHCGIDTRDYCSARAEIV---GVRIRRGEQEFSVFTCYVHLVGQWRSRAHA 194

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR 222
             +    G        +  + L          W  N+ +R
Sbjct: 195 TIRATETGHIILGGDFNAHNEL----------WGTNRRMR 224


>gi|291401220|ref|XP_002716984.1| PREDICTED: CCR4 carbon catabolite repression 4-like [Oryctolagus
           cuniculus]
          Length = 426

 Score = 47.5 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/263 (14%), Positives = 65/263 (24%), Gaps = 28/263 (10%)

Query: 21  LAAWIKENNPDIICLQETKTEDKNFPFE--TLQSLNYHIETCGQKSYNGVAILSKYQPIE 78
           +   I    PDI+CLQE    D  F      L  L Y      +         S    +E
Sbjct: 174 ILEEILAYQPDILCLQEV---DHYFDTFQPLLSRLGYQGTFFPKP-------WSPCLDVE 223

Query: 79  IVTHLPGD--DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
                 G           +  +  I    + +    +     +   +   +       L+
Sbjct: 224 HNNGPDGCALFFLQNRFKLVNSANIRLTAMTLKTNQVAIAQTLECKESGRQFCIAVTHLK 283

Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN----MGFT 192
             +               N+         P+I   D               +        
Sbjct: 284 ARTGWERFRSAQGCDLLQNLQNITQGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAY 343

Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP------EATSLLHSARIDTKPR 246
             + A   +   Y+ W        ++    +D+I  S        A  LL   +I     
Sbjct: 344 KLLSADGQSEPPYTTWKIRTSGECRHT---LDYIWYSKHALSVRSALDLLTEEQIGPNRL 400

Query: 247 -GWTKPSDHTPVIVSLDIPEPRK 268
             +  PSDH  ++      E   
Sbjct: 401 PSFNYPSDHLSLVCDFSFNEESD 423


>gi|218260769|ref|ZP_03475911.1| hypothetical protein PRABACTJOHN_01575 [Parabacteroides johnsonii
           DSM 18315]
 gi|218224372|gb|EEC97022.1| hypothetical protein PRABACTJOHN_01575 [Parabacteroides johnsonii
           DSM 18315]
          Length = 353

 Score = 47.5 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/237 (13%), Positives = 59/237 (24%), Gaps = 22/237 (9%)

Query: 22  AAWIKENNPDIICLQETKTE-DKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80
           AA+IK+  PDI+C QE     D  +  ++++    ++              + Y    I 
Sbjct: 124 AAYIKKLQPDIVCFQE--APGDGYYHRDSIRYAFDYVLYKYISRRTDHLPTTIYSRYPIH 181

Query: 81  THLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQ 140
           +       +     + A   IN Q +R+ N +    +                    A +
Sbjct: 182 SVKALYYKNSSNMSLIADVRINNQYIRVINNHFETTSVNAYRGIITAPGKSLEIRAKAVK 241

Query: 141 RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHD 200
            L L+           I                    +   +            +     
Sbjct: 242 NLILQMKDN--NRKRAIQADSIYAEIRRSPYPVIVCGDFNDTPASYTYHRVRKGLTDGFQ 299

Query: 201 THH---LYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDH 254
                  Y+F           +  RID++  S                      SDH
Sbjct: 300 DAGNGYQYTF-------RQLYRLWRIDYVFYSESLKG--QDCF-----SPDVSYSDH 342


>gi|32475353|ref|NP_868347.1| hypothetical protein RB8407 [Rhodopirellula baltica SH 1]
 gi|32445894|emb|CAD78625.1| probable secreted protein [Rhodopirellula baltica SH 1]
          Length = 281

 Score = 47.5 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/265 (10%), Positives = 80/265 (30%), Gaps = 41/265 (15%)

Query: 4   VTVATWNVNSIRAR-----IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           + V ++N++  R       +  LA  I+  +PD++ +QE                     
Sbjct: 44  LRVLSYNIHHGRGTDGKIDLDRLANVIRSVDPDLVAVQEV-------------------- 83

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
                  NG+    +   ++   H                  ++   +    ++   G+P
Sbjct: 84  -DQNTRRNGMVNQVETLAVQTSLHGKFAKQIDYDGGEYGQAVLSKYPIESLEVHWLPGDP 142

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
           I      ++       +     RL      +     ++  +     N ++        + 
Sbjct: 143 I-----RERRIVGVAEILIHKTRLRFATTHLHHSRADLREKQATELNRLLACGSTPVIIA 197

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
              + +       T   +    T      +   + +        +D++ + P  +  +  
Sbjct: 198 GDFNAKPASLAMQTLQAKWRIATTESMHTFPARSPNRQ------LDYVAMYPANSWRIVE 251

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263
           + +  +P      SDH P++V +++
Sbjct: 252 SEVLDEP----VASDHRPLLVEIEL 272


>gi|32475548|ref|NP_868542.1| hypothetical protein RB8783 [Rhodopirellula baltica SH 1]
 gi|32446090|emb|CAD75919.1| conserved hypothetical protein [Rhodopirellula baltica SH 1]
          Length = 321

 Score = 47.5 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/286 (12%), Positives = 73/286 (25%), Gaps = 61/286 (21%)

Query: 7   ATWNVNSIRA---------RIHNLAAWIKENNPDIICLQETKTE---------------- 41
            T+N+  +           R   +   I     D++ LQE   +                
Sbjct: 67  MTYNIRYLNTHDRQDLWSMRRSKVIETIAS--ADVVGLQEVTVQQLHDIQEGTPEWTWYG 124

Query: 42  ---DKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT 98
              D          + Y      +   +G   LS+   +                 +   
Sbjct: 125 VGRDDGKEGGEFAPIGYR-HDRFEAMDHGTLWLSETPTVVGSKGWDAALPRTMTWMVLRR 183

Query: 99  FTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP 158
                + L I + +   G                R +     +   + P+I  GD+N +P
Sbjct: 184 KLDRAEFLVINSHFDHRGQNA--------REQSGRLVAAEVDQRATDLPVIVMGDFNAMP 235

Query: 159 QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN 218
                      E             +     G  +  +A                     
Sbjct: 236 DSAPLKALQSGEKVKLLDARDEVDGKPTGPTGTWNGFKAIQPD----------------- 278

Query: 219 KGIRIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
              RIDH++++      +   R +D +       SDH P+ + +D+
Sbjct: 279 --RRIDHVLVNDRVV--VQEYRTLDPRTEAGRYASDHLPIAIRIDL 320


>gi|163739629|ref|ZP_02147038.1| endonuclease/exonuclease/phosphatase family protein [Phaeobacter
           gallaeciensis BS107]
 gi|161387088|gb|EDQ11448.1| endonuclease/exonuclease/phosphatase family protein [Phaeobacter
           gallaeciensis BS107]
          Length = 241

 Score = 47.5 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/267 (12%), Positives = 67/267 (25%), Gaps = 52/267 (19%)

Query: 4   VTVATWNVN---SI--RARIHNLAAWIKENNPDIICLQET--KTED--KNFPFETLQSLN 54
           + +A++N+     +  R R       I+    D++ LQE   +        P   L    
Sbjct: 12  LRLASYNIQKSVGLDLRRRPRRTLQVIEGTGADLVLLQEADKRLPPRPAALPHFVLDEAG 71

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           + I         G A    +    ++    G +L                   + +  L 
Sbjct: 72  WQIV------DLGGAGSLGWHGNAVIWRGDGIELQDHGHIPLPGLEPRGAVWALFHTGLG 125

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
               + +                 + +   E+    A      P+    +       D  
Sbjct: 126 PLRVVGAH-------------LGLTTKARHEQVHHLAEVIAREPELPTVWAGDFN--DWS 170

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
               +     +L+ +    +  A                         +D I +S     
Sbjct: 171 RQPVLDHLAPQLRFVPPRASFPALRPMGA-------------------LDRIAVSAGLE- 210

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261
            +  + +    R     SDH PV   L
Sbjct: 211 -VVDSGVYR-TRPAHIASDHLPVWADL 235


>gi|110680975|ref|YP_683982.1| hypothetical protein RD1_3833 [Roseobacter denitrificans OCh 114]
 gi|109457091|gb|ABG33296.1| conserved hypothetical protein [Roseobacter denitrificans OCh
          114]
          Length = 227

 Score = 47.5 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 10/62 (16%)

Query: 4  VTVATWNVN---SI--RARIHNLAAWIKENNPDIICLQE----TKTEDKNFPFETLQ-SL 53
          + +A++N+     +  R     +A  + E + D++ LQE    T T     P E L+  L
Sbjct: 1  MKIASYNIRKAVGLDWRRDPDRVADVLLEIDADVVVLQEADRRTGTRAGVLPLERLEDEL 60

Query: 54 NY 55
           Y
Sbjct: 61 GY 62


>gi|300704421|ref|YP_003746024.1| hypothetical protein RCFBP_20225 [Ralstonia solanacearum CFBP2957]
 gi|299072085|emb|CBJ43417.1| conserved protein of unknown function,
           endonuclease/exonuclease/phosphatase family [Ralstonia
           solanacearum CFBP2957]
          Length = 289

 Score = 47.5 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 44/308 (14%), Positives = 84/308 (27%), Gaps = 68/308 (22%)

Query: 1   MSVVTVATWNV------NSIRARIHNLAAWIKENNP-DIICLQETKTEDKNFP------- 46
           M  + + TWN+      +  R  +  + A  +   P DI+CLQE  +   N P       
Sbjct: 1   MGTI-ILTWNIQWGRGADG-RVDLPRMLAEARAMGPFDILCLQEVTSGFGNLPGRPGDDQ 58

Query: 47  -FETLQSLNYHI----------ETCGQKSYNGVAILSKYQPIEIVTHLPGD----DLDVQ 91
             E   +L                  +    G AI ++   + +  H           + 
Sbjct: 59  WRELAGTLGPAFTLIDGIALERHEGARIQRFGNAIATRLPVLHVARHALPCPAAACPTMP 118

Query: 92  ARFIEATFTINTQTLRIGNLYLPHGNP---------------ITSTKYDDKISWIKRFLR 136
              IEA        LR+ + +L + +                    +     +       
Sbjct: 119 RMAIEAIVQAPFGPLRVISTHLEYYSETQRIAQIDALRALHVEGWMRAAHPPTLGPEPAD 178

Query: 137 FASQRLELEEPLIFAGDYNIIPQ--PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDA 194
              + L      +  GD+N  P   P            A        +            
Sbjct: 179 GPFRPLAQTHATVICGDFNCKPDSTPKRLATVPFSHETATLYDAWEVAHGPAPQPPTFGV 238

Query: 195 IRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDH 254
                 T   Y+                 D +++S    + +    ++      T+ SDH
Sbjct: 239 HDRAGWTEPAYAC----------------DFMLISEPLKTRVARVEVN----SVTQASDH 278

Query: 255 TPVIVSLD 262
            P+++ L+
Sbjct: 279 QPMLLELN 286


>gi|257466188|ref|ZP_05630499.1| Endonuclease/exonuclease/phosphatase [Fusobacterium gonidiaformans
           ATCC 25563]
          Length = 265

 Score = 47.5 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 43/272 (15%), Positives = 80/272 (29%), Gaps = 17/272 (6%)

Query: 4   VTVATWNVNSIRARIHN------LAAWIKENNPDIICLQET--KTEDKNFPFETLQSLNY 55
           + + T NV+S             LA  I E   D+I LQE   K E +    E  +    
Sbjct: 1   MKLLTINVHSW-LEEKQEEKMELLAKVIAEKRYDVIALQEVNQKIEARLLKGEIREDNFL 59

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLP--GDDLDVQARFIEATFTINTQTLRIGNLYL 113
           +      + Y        +    I   +   G  L  +   +E      T +  + ++  
Sbjct: 60  YQLCKKIEKYTEEKYEYHWSHSHIGFDIYEEGIALLTRHSILEKEDFYCTNSKTVYSISS 119

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
                I   + + K              +E               +         +  DA
Sbjct: 120 RKIVKI-FLEIEGKEIEFYSCHMNLPDCIEENMEQNIQNILKHSSRNCLKILMGDFNTDA 178

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
                  Q   +          +   D   +Y     + +S  +    R+D+I L+ +  
Sbjct: 179 FHDESSYQKILEQGLFDSYTLSKKKDDGVTVYKNISGWENSVEEK---RLDYIFLTEQYE 235

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
             + S+ +    + +   SDH  + V L I E
Sbjct: 236 --VESSYVIFNGKNYPCISDHNGLEVILKIKE 265


>gi|317504528|ref|ZP_07962503.1| endonuclease/exonuclease/phosphatase [Prevotella salivae DSM 15606]
 gi|315664350|gb|EFV04042.1| endonuclease/exonuclease/phosphatase [Prevotella salivae DSM 15606]
          Length = 283

 Score = 47.5 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/272 (12%), Positives = 69/272 (25%), Gaps = 35/272 (12%)

Query: 8   TWNV-----------NSIRARIHNLAAWIKENNPDIICLQET---KTEDKNFPFETLQSL 53
           T+N+           N+ + R  +L  +I    P I   QE    +  D     +   +L
Sbjct: 26  TYNIRYNNPDDIAEGNAWKQRCPHLCDFINFEQPVIFGTQEVLVDQLHDLQKGLDHYSTL 85

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
               E   +                + +        +     + +   +   +RI   + 
Sbjct: 86  GVGREDGKEAGEYAAIFFKSDALKCLDSGY----FWLSETPNKPSLGWDAACIRICT-WG 140

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
              +  +   +    + +      A +                          +   ++ 
Sbjct: 141 KFEDKASKKTFFFFNTHMDHVGTKARRESAHLILNQIKAIAKNNHVILTGDFNVDQTDEI 200

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
                     +                     ++ DY  D        RIDHI +S +  
Sbjct: 201 YKIFSDSGLLRDCYANAKQRMAPIG-------TWNDYMQDYRDM---ARIDHIFVSNDF- 249

Query: 234 SLLHSARIDTKPRGWTKP----SDHTPVIVSL 261
             +    I T      K     SDH PV+V L
Sbjct: 250 -NIEHYGIFTNSYWLGKTRRNISDHYPVMVKL 280


>gi|31083028|ref|NP_036250.2| nocturnin [Homo sapiens]
 gi|212276446|sp|Q9UK39|NOCT_HUMAN RecName: Full=Nocturnin; AltName: Full=CCR4 protein homolog
 gi|109731055|gb|AAI13495.1| CCR4 carbon catabolite repression 4-like (S. cerevisiae) [Homo
           sapiens]
 gi|109731718|gb|AAI13501.1| CCR4 carbon catabolite repression 4-like (S. cerevisiae) [Homo
           sapiens]
 gi|119625534|gb|EAX05129.1| CCR4 carbon catabolite repression 4-like (S. cerevisiae), isoform
           CRA_a [Homo sapiens]
 gi|119625536|gb|EAX05131.1| CCR4 carbon catabolite repression 4-like (S. cerevisiae), isoform
           CRA_a [Homo sapiens]
          Length = 431

 Score = 47.5 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/263 (14%), Positives = 65/263 (24%), Gaps = 28/263 (10%)

Query: 21  LAAWIKENNPDIICLQETKTEDKNFPFE--TLQSLNYHIETCGQKSYNGVAILSKYQPIE 78
           +   I    PDI+CLQE    D  F      L  L Y      +         S    +E
Sbjct: 179 ILEEILAYQPDILCLQEV---DHYFDTFQPLLSRLGYQGTFFPKP-------WSPCLDVE 228

Query: 79  IVTHLPGD--DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
                 G           +  +  I    + +    +     +   +   +       L+
Sbjct: 229 HNNGPDGCALFFLQNRFKLVNSANIRLTAMTLKTNQVAIAQTLECKESGRQFCIAVTHLK 288

Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN----MGFT 192
             +               N+         P+I   D               +        
Sbjct: 289 ARTGWERFRSAQGCDLLQNLQNITQGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAY 348

Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP------EATSLLHSARIDTKPR 246
             + A   +   Y+ W        ++    +D+I  S        A  LL   +I     
Sbjct: 349 KLLSADGQSEPPYTTWKIRTSGECRHT---LDYIWYSKHALNVRSALDLLTEEQIGPNRL 405

Query: 247 -GWTKPSDHTPVIVSLDIPEPRK 268
             +  PSDH  ++      E   
Sbjct: 406 PSFNYPSDHLSLVCDFSFTEESD 428


>gi|7670468|dbj|BAA95085.1| unnamed protein product [Mus musculus]
 gi|148681069|gb|EDL13016.1| angel homolog 2 (Drosophila), isoform CRA_b [Mus musculus]
          Length = 212

 Score = 47.5 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 31/97 (31%), Gaps = 5/97 (5%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73
           R  N+   IK  + D++CLQE   ++ ++  E    L+SL YH E   +           
Sbjct: 31  RFPNILKEIKHFDADVLCLQEV--QEDHYGTEIRPSLESLGYHCEYKMKTGRKPDGCAIC 88

Query: 74  YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
           ++               +              L +  
Sbjct: 89  FKHSRFSLLSVNPVEFCRRDIPLLDRDNIGLVLLLQP 125


>gi|17545927|ref|NP_519329.1| hypothetical protein RSc1208 [Ralstonia solanacearum GMI1000]
 gi|17428222|emb|CAD14910.1| probable metal-dependent hydrolase protein [Ralstonia solanacearum
           GMI1000]
          Length = 289

 Score = 47.5 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/302 (11%), Positives = 72/302 (23%), Gaps = 58/302 (19%)

Query: 1   MSVVTVATWNV------NSIRARIHNLAAWIKENNP----DIICLQETKTEDKNFPF--- 47
           M  + + TWN+      +    R+  L+  + E       D++CLQE  +   + P    
Sbjct: 1   MGTI-ILTWNIQWGRGADG---RVD-LSRMLAEARAMGSFDVLCLQEVTSGFGHLPGQPG 55

Query: 48  -----ETLQSLNYHI----------ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQA 92
                E   +L                  Q    G AI ++   + +  H      D   
Sbjct: 56  EDQWQELAGALGQAFTLIDGIALERHEGAQIRRFGNAIATRLPVLHVARHALPCPADAGP 115

Query: 93  RFIEATF-----------TINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQR 141
                              + +  L   +                +              
Sbjct: 116 TMPRMAIEAIVQAPFGPLRVVSTHLEYYSETQRIAQIDALRALHVEGCMRAAHPPTLGPE 175

Query: 142 LELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT 201
                    A     +        P              ++                  T
Sbjct: 176 PTDGPFRPLAQTRATVICGDFNCKPDSKPKRLATVPFSHEAAALYDAWETAHGPTPQPPT 235

Query: 202 HHLY--SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
             ++  + W   A +         D +++S    + +    ++      T+ SDH P ++
Sbjct: 236 FGVHDRTGWTEPAYA--------CDFMLVSEPLKTRVTRVEVN----STTQASDHQPTLL 283

Query: 260 SL 261
            L
Sbjct: 284 EL 285


>gi|74143502|dbj|BAE28819.1| unnamed protein product [Mus musculus]
          Length = 429

 Score = 47.5 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/262 (13%), Positives = 68/262 (25%), Gaps = 28/262 (10%)

Query: 21  LAAWIKENNPDIICLQETKTEDKNFPFE--TLQSLNYHIETCGQKSYNGVAILSKYQPIE 78
           +   I    PDI+CLQE    D  F      L  L Y      +         S    +E
Sbjct: 177 ILEEILAYQPDILCLQEV---DHYFDTFQPLLSRLGYQGTFFPKP-------WSPCLDVE 226

Query: 79  IVTHLPGD--DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
                 G           + ++  I    + +    +     +   +   +       L+
Sbjct: 227 HNNGPDGCALFFLQNRFKLISSTNIRLTAMTLKTNQVAIAQTLECKESGRQFCIAVTHLK 286

Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN----MGFT 192
             +               N+         P+I   D               +        
Sbjct: 287 ARTGWERFRSAQGCDLLQNLQNITQGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAY 346

Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR------ 246
             +     +   Y+ W        ++    +D+I  S  A S+  +  + T+ +      
Sbjct: 347 KLLSPDGQSEPPYTTWKIRTSGECRHT---LDYIWYSRHALSVTSALDLLTEEQIGPNRL 403

Query: 247 -GWTKPSDHTPVIVSLDIPEPR 267
             +  PSDH  ++      E  
Sbjct: 404 PSFHYPSDHLSLVCDFSFNEEP 425


>gi|330801193|ref|XP_003288614.1| hypothetical protein DICPUDRAFT_79391 [Dictyostelium purpureum]
 gi|325081341|gb|EGC34860.1| hypothetical protein DICPUDRAFT_79391 [Dictyostelium purpureum]
          Length = 548

 Score = 47.5 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 4/42 (9%)

Query: 1   MSVVTVATWNV--NSI--RARIHNLAAWIKENNPDIICLQET 38
             ++T  T+NV  +S   R R + L   I++ NPDIICLQE 
Sbjct: 246 FKILTYITFNVWFDSFLWRERANQLFKLIQDKNPDIICLQEV 287


>gi|242825438|ref|XP_002488440.1| reverse transcriptase [C. elegans], putative [Talaromyces
           stipitatus ATCC 10500]
 gi|218712258|gb|EED11684.1| reverse transcriptase [C. elegans], putative [Talaromyces
           stipitatus ATCC 10500]
          Length = 1129

 Score = 47.5 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 20/56 (35%), Gaps = 3/56 (5%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278
           ID +  S    + + S   DTKP  W    DH P+    D+   R         N 
Sbjct: 180 IDLVWASHNLANRVVSC--DTKPEWWYGA-DHVPISTQFDLTAIRVPPLVRKQWNA 232


>gi|146419034|ref|XP_001485482.1| hypothetical protein PGUG_03211 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 290

 Score = 47.5 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/265 (13%), Positives = 59/265 (22%), Gaps = 45/265 (16%)

Query: 17  RIHNLAAWIK---ENNPDIICLQE-TKTEDKNF-----PFETLQSLN--------YHIET 59
           R   +   IK     +P I+ LQE  + +  +      P      +         Y    
Sbjct: 53  RKAGVIDSIKNYTSQHPTIVGLQEALRGQLDDIMKGLGPEWKFFGVGGSGDTKGEYCPII 112

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
                +  V   +K+          G     +     A     +    I           
Sbjct: 113 YKSNEWELVNGTTKWLSETPDKPSRGYGSKYERIVTFAELRHVSSGRTIHYFNTHLDPHD 172

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +Y+       R +           P+   GD+N                 A    + 
Sbjct: 173 DHVRYE-----SVRDIITYVNHTRQGSPVFLGGDFNAKRTSAPYKYVATQMTPALIAPDP 227

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML-SPEATSLLHS 238
                  +        +  H                       ID I      +   +  
Sbjct: 228 --KGVDNKEKSTNSGFQFNHPKT--------------------IDFIFFQDHGSKVKVDL 265

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263
             I +   G    SDH+PVI    I
Sbjct: 266 YEILSSTSGNVVISDHSPVIADFSI 290


>gi|3859942|gb|AAC72921.1| putative endonuclease/reverse transcriptase [Lymantria dispar]
          Length = 998

 Score = 47.5 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/258 (13%), Positives = 66/258 (25%), Gaps = 38/258 (14%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + T+N NS+  +   +  +++E+  DI+ +QET           L+  N         
Sbjct: 14  LKIGTFNANSLTQQKDEVGTFLREHQLDILLVQET----------FLKPFNKDPRVANYN 63

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
                   S      I        L            I     R+          +++  
Sbjct: 64  IVRNDRTTSPMGGTLIYY---KRSLHCTPVDPPPLMYIEASICRLALSGHQPITLVSAYL 120

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
             ++    +   +     LEL   +I  GD N       C +            +     
Sbjct: 121 SPNREHSKQLVEKDLKALLELGGAVIIGGDLNAKNTSWSCQSSNKRGKTLELFADRLGFD 180

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
                         +H                       +D  +L       L S  +  
Sbjct: 181 VIAPIEPTHFPFNVSHRPDI-------------------LDIFLL-KNINLRLCSIEVQH 220

Query: 244 KPRGWTKPSDHTPVIVSL 261
           +       SDH PV + L
Sbjct: 221 ELD-----SDHRPVTLEL 233


>gi|124360723|gb|ABN08700.1| Endonuclease/exonuclease/phosphatase [Medicago truncatula]
          Length = 814

 Score = 47.5 bits (111), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/273 (11%), Positives = 71/273 (26%), Gaps = 34/273 (12%)

Query: 4   VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + +  WNV           +  ++ +N  D+  L ET+ +   F    + S+ +      
Sbjct: 518 MKLVCWNVRGCNKPFKQKEIKNFLLKNKFDMCILVETRIKADKF--NKISSMIFKRWPVL 575

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
               +             V  +       QA   E     +++      +Y  +      
Sbjct: 576 NNYDSAANGRIWVSWNPTVLDVKPIASSAQAIHCEVDNLTSSECFNFVAVYAFNTLEQRK 635

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
             ++       +  R      +    L+     N                        + 
Sbjct: 636 ELWNFIAHTSAQNSRNLLIGGDFNNVLLVDDRRN-------------------GNPVTQH 676

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYY-ADSWSKNKGIRIDHIMLSPEATSLLHSA- 239
             Q   +    + +         Y++ +   +     +K   ID  + +        +A 
Sbjct: 677 EIQDFSDCLLHNRLSEVRTIGDYYTWCNNQTSGDRIYSK---IDRFIANTSWLQKFTNAV 733

Query: 240 -RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271
             +  K       SDH P+ + +  P   K   
Sbjct: 734 GEVLPK-----GVSDHCPISMDMSCPASPKNTP 761


>gi|284034607|ref|YP_003384538.1| endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836]
 gi|283813900|gb|ADB35739.1| Endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836]
          Length = 266

 Score = 47.1 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/272 (14%), Positives = 74/272 (27%), Gaps = 26/272 (9%)

Query: 4   VTVATWNVNSIR-----ARIHNLAAWIKENNPDIICLQETKTE-DKNFPFETLQSLNYHI 57
           + V TWNV   R      R   +   ++E + D+I LQE   + + N   +    L  H 
Sbjct: 1   MRVLTWNVW-WRFGPWQRRADAILTVLREADADLIGLQEVWAQGNDNQAAQLASELGLHW 59

Query: 58  ETC---GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
                   + +              +      D                     G  +  
Sbjct: 60  TFEPLANPEPWQRRLGDRSVAIGNAILSRRPIDDRAVLELPGPEQRSALFASTGGVPFFT 119

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ-PHDCYNPIIWENDA 173
                  T    +   ++    F ++      P +  GD+N +P          +    A
Sbjct: 120 THLEAPITASAIRCEQVRALAGFVAEHSRAAHPPVITGDFNALPDSDELRLFSGVRTAPA 179

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML---SP 230
              L +  +++  +           +      +F              R+D+I +     
Sbjct: 180 VPGLVLIDAWEYAEPGQPAATWDTANPHVAA-TFTPS----------ARVDYIHVGVPGR 228

Query: 231 EATSLLHSA-RIDTKPRGWTKPSDHTPVIVSL 261
                + +  R    P     PSDH  V+  L
Sbjct: 229 NGAGHVTAVRRTGAAPVDGVWPSDHAAVVAEL 260


>gi|145354287|ref|XP_001421421.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|145354354|ref|XP_001421452.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144581658|gb|ABO99714.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144581689|gb|ABO99745.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 401

 Score = 47.1 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 48/284 (16%), Positives = 84/284 (29%), Gaps = 42/284 (14%)

Query: 17  RIHNLAAWIKENNPDIICLQET--KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKY 74
           R+  +   I  +  D++ LQE   K  +  F    L +  Y       KS   +   + +
Sbjct: 121 RLQLVLEDILRSKADVVALQEVDKKYHETLFVP-VLTANGYIATDWVGKSGQTLEGCAMF 179

Query: 75  QPIEIV-------------------THLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
             +                           DD + +        T   Q  R+       
Sbjct: 180 FALSKFESIEREEAIKLTEIGDKALRRWIADDDNAELAMALKKITSIAQLARVKVRASGK 239

Query: 116 GNPITSTKYDDKISWIK------RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
              + +T        +             +      +PL+  GD+N  P+          
Sbjct: 240 SLCVGNTHLFFHPGAMHLRVLQAHEFTTRATAFAAGDPLVLCGDFNGEPEDGVIRYLTKG 299

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHD--THHLYSFWDYYADSWSKNKGIRIDHIM 227
           E  A     VR S  +   +G    +R      +   +  W  Y   +    G  +D++ 
Sbjct: 300 EISASDEDWVRGSLFRAVPIGCGAHLRTARPLFSAGGFLEWTNYVGGF---VGA-LDYVW 355

Query: 228 LS-PEATSLLHS-----ARI--DTKPRGWTKPSDHTPVIVSLDI 263
            S  +  S   S     + +   T       PSDH PVIV +D+
Sbjct: 356 CSTSDFASRATSPLPDMSAVLAHTALPNAQFPSDHIPVIVDVDL 399


>gi|33563248|ref|NP_033964.1| nocturnin [Mus musculus]
 gi|17380366|sp|O35710|NOCT_MOUSE RecName: Full=Nocturnin; AltName: Full=CCR4 protein homolog
 gi|5924314|gb|AAD56547.1|AF183960_1 carbon catabolite repression 4 protein homolog [Mus musculus]
 gi|9885278|gb|AAG01384.1|AF199491_1 NOCTURNIN [Mus musculus]
 gi|26352748|dbj|BAC40004.1| unnamed protein product [Mus musculus]
 gi|148703247|gb|EDL35194.1| CCR4 carbon catabolite repression 4-like (S. cerevisiae), isoform
           CRA_c [Mus musculus]
 gi|187952215|gb|AAI39370.1| CCR4 carbon catabolite repression 4-like (S. cerevisiae) [Mus
           musculus]
 gi|223461128|gb|AAI39371.1| CCR4 carbon catabolite repression 4-like (S. cerevisiae) [Mus
           musculus]
          Length = 429

 Score = 47.1 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/262 (13%), Positives = 68/262 (25%), Gaps = 28/262 (10%)

Query: 21  LAAWIKENNPDIICLQETKTEDKNFPFE--TLQSLNYHIETCGQKSYNGVAILSKYQPIE 78
           +   I    PDI+CLQE    D  F      L  L Y      +         S    +E
Sbjct: 177 ILEEILAYQPDILCLQEV---DHYFDTFQPLLSRLGYQGTFFPKP-------WSPCLDVE 226

Query: 79  IVTHLPGD--DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
                 G           + ++  I    + +    +     +   +   +       L+
Sbjct: 227 HNNGPDGCALFFLQNRFKLISSTNIRLTAMTLKTNQVAIAQTLECKESGRQFCIAVTHLK 286

Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN----MGFT 192
             +               N+         P+I   D               +        
Sbjct: 287 ARTGWERFRSAQGCDLLQNLQNITQGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAY 346

Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR------ 246
             +     +   Y+ W        ++    +D+I  S  A S+  +  + T+ +      
Sbjct: 347 KLLSPDGQSEPPYTTWKIRTSGECRHT---LDYIWYSRHALSVTSALDLLTEEQIGPNRL 403

Query: 247 -GWTKPSDHTPVIVSLDIPEPR 267
             +  PSDH  ++      E  
Sbjct: 404 PSFHYPSDHLSLVCDFSFNEEP 425


>gi|302887390|ref|XP_003042583.1| hypothetical protein NECHADRAFT_104616 [Nectria haematococca mpVI
           77-13-4]
 gi|256723495|gb|EEU36870.1| hypothetical protein NECHADRAFT_104616 [Nectria haematococca mpVI
           77-13-4]
          Length = 507

 Score = 47.1 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/292 (10%), Positives = 79/292 (27%), Gaps = 42/292 (14%)

Query: 4   VTVATWNV-NS----IRARIHNLAAWIKENNPDIICLQETKTEDKN----FPFETLQSLN 54
           + V + N+ N            +  ++  +  DII +QE            P     +L 
Sbjct: 225 LKVMSLNMWNGGTGVTNYHDKQV-RFMASSGADIIGIQE-----DQWGRHIPRLA-NALG 277

Query: 55  YHIETC--------GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
           +   +                  ++S       V      D      ++           
Sbjct: 278 WWGWSSGGDVGILSKYPIVEEYGVISGPSRSGGVRIELDGDQQQLNFYVAHLGYTPYGPY 337

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
                ++     I       +   ++  LR     L+  +        +     H  +  
Sbjct: 338 DTCFSHMSPEKVIQREAQSGRTPQMEATLRGMKNHLDQADETPVFLVGDFNAPSHLDWVE 397

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH---HLYSF-----WDYYADSWSKN 218
            + E +  ++     +    +  G  D+ R  +         ++     W+       ++
Sbjct: 398 GLKEKNCGYSNFRWPTSVLPEEAGLIDSFRVANPDPVKVQGTTWSPVTIWNNANRREPQD 457

Query: 219 KGIRIDHIM-------LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              RID I+       ++   T ++         +     SDH  V+ + ++
Sbjct: 458 ---RIDFILHKGKSLKVTDSHTVVVGDPMPIPDTKYNEWFSDHAAVLTTYEL 506


>gi|294865495|ref|XP_002764425.1| hypothetical protein Pmar_PMAR008835 [Perkinsus marinus ATCC 50983]
 gi|239863765|gb|EEQ97142.1| hypothetical protein Pmar_PMAR008835 [Perkinsus marinus ATCC 50983]
          Length = 219

 Score = 47.1 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 25/80 (31%)

Query: 153 DYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYA 212
             NI P        +         ++   +  K  +        A       ++ WD Y 
Sbjct: 95  GINIPPTEQRKVADLWGMGRGSEDIKRWLNDMKEVDGMIDSFRLAHPSAEDRFTCWDQYR 154

Query: 213 DSWSKNKGIRIDHIMLSPEA 232
           +    N G RID+I++    
Sbjct: 155 NRRYANAGSRIDYILVDNTI 174


>gi|300774356|ref|ZP_07084220.1| endonuclease/exonuclease/phosphatase [Chryseobacterium gleum ATCC
           35910]
 gi|300507000|gb|EFK38134.1| endonuclease/exonuclease/phosphatase [Chryseobacterium gleum ATCC
           35910]
          Length = 269

 Score = 47.1 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 44/273 (16%), Positives = 80/273 (29%), Gaps = 31/273 (11%)

Query: 4   VTVATWNVNSIRA------------RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51
           +TV ++N   IR             R  ++A  +   +PD   +QE     +        
Sbjct: 15  LTVMSFN---IRLNVESDKDNAWPKRKQDVADLLTYYHPDYFGVQE--ALPEQMKDIKAG 69

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL-RIGN 110
             NY     G+         S          +        +   E         L RI  
Sbjct: 70  LKNYDYIGVGRDDGKEKGEFSAIFYDTNRLDVVKSGTFWLSETPEKPSKGWDAALNRICT 129

Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170
             +              ++     +   ++    E  L    + N    P          
Sbjct: 130 YAVFKDKKSKKEFLA--MNLHFDHIGNVARVKSSELILKKIKELNPKNLPVTLSGDFNLT 187

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230
           +D+    E  +   +     F  +    +     ++ +D   ++  K+   RID+I  + 
Sbjct: 188 DDS----EPIKILSQNMKDTFYHSETKHYGPVGTFTAFDV--NTVPKD---RIDYIF-TQ 237

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             T   H   I+ +      PSDH PVIV L +
Sbjct: 238 GFTIRSHR-HINDRRENLLYPSDHFPVIVHLSL 269


>gi|218507835|ref|ZP_03505713.1| putative endonuclease/exonuclease/phosphatase family protein
           [Rhizobium etli Brasil 5]
          Length = 149

 Score = 47.1 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 45/112 (40%), Gaps = 24/112 (21%)

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
              E   +     + GF + + A       ++   Y+A    +    ++D+I LSP   +
Sbjct: 40  HQPEAESALDVFSHDGFVENVMARRQPLDRWTL--YHARGPQEQHLCQLDYIWLSPALAA 97

Query: 235 L--------LHSA-----------RIDTKPR-GWTKP--SDHTPVIVSLDIP 264
                    + +             ++  PR GW +P  SDH PV+++LD+P
Sbjct: 98  HNSGRLPEIIRNGQPYRTVFPPGQEVERYPRTGWDRPKASDHCPVVMTLDLP 149


>gi|254486528|ref|ZP_05099733.1| endonuclease/exonuclease/phosphatase [Roseobacter sp. GAI101]
 gi|214043397|gb|EEB84035.1| endonuclease/exonuclease/phosphatase [Roseobacter sp. GAI101]
          Length = 242

 Score = 47.1 bits (110), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/271 (12%), Positives = 67/271 (24%), Gaps = 62/271 (22%)

Query: 3   VVTVATWNVN---SI--RARIHNLAAWIKENNPDIICLQE----TKTEDKNFPFETLQ-S 52
            + VA++N+     +  R   H +A  + E + D+I LQE            P + L+  
Sbjct: 15  TIRVASYNIRKAVGLDWRRDPHRIADVLAEVDADVIALQEADKRLGARAGVLPLQRLEAE 74

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR--IGN 110
           L Y            +  +S                     ++    ++ T   R  +  
Sbjct: 75  LGY-----------RMVEVSMRPHSHGWQGNAILVRSHLRDYVAERISLPTMEPRGAVSV 123

Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170
                   I            ++ +    + +   E  +                    E
Sbjct: 124 RLQEPELEIIGLHLGLTPGMRRKQMLNLQKLMAEREHPVLLAG-------------DFNE 170

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230
            +         S        F                     D +    G+R        
Sbjct: 171 WNTGRMPFAPPSTVVTPGPSFHARRP------------SAQLDRFVLGPGLR-------- 210

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
                  S+ +   P    + SDH P++V +
Sbjct: 211 -----SVSSHVHQSPLS-KRASDHLPIVVDI 235


>gi|328874296|gb|EGG22662.1| hypothetical protein DFA_04792 [Dictyostelium fasciculatum]
          Length = 552

 Score = 47.1 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 43/305 (14%), Positives = 88/305 (28%), Gaps = 53/305 (17%)

Query: 3   VVTVATWNVNS----IRARIHNLAAWIKENNPDIICLQETK----------------TED 42
              + T+N+ +     R R   +   IK++ PD+I LQE +                 ++
Sbjct: 254 TFKLMTYNIWNYNKPWRIRSKLITDIIKDHQPDVIALQELRYSKWDGEHYKESPKLMGQE 313

Query: 43  KN-----FPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA 97
           +N         +  +L Y+        YN      + + + I++  P   ++      + 
Sbjct: 314 RNQIQHIVNLLSFHNLKYNYYYLPSMIYNNEVDGLQMEGLGILSKHPIVKIESTKLTNDH 373

Query: 98  TFTINTQTLRIGNLYLPHGNPIT------STKYDDKISWIKRFLRFASQRLELEEPLIFA 151
                    R   L   + +               +      +      +   + P I  
Sbjct: 374 IDDTTDTHQRSCLLATINIDGRHLNVLTSHFSLSFQGGQRNAYEIHNWTKQYDDAPNILV 433

Query: 152 GDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYY 211
           GD+N  P   + +                           ++   +   T    ++ D  
Sbjct: 434 GDFNAEP---NSHPIQFLTGKHSIKDNTGDFKDMYDTYCQSNPDNSICTTKGGITYRDVG 490

Query: 212 ADSWSKNKGIRIDHIMLSPEATSLLHSARI--------------DTKPRGWTKPSDHTPV 257
             S  K    RID IM+   + S   + +I              D        PSDH+ +
Sbjct: 491 DVSIEK----RIDFIMVKQSSKSTTTN-QIELTNLESVGGQRFDDNGIPLSIFPSDHSGL 545

Query: 258 IVSLD 262
           + +  
Sbjct: 546 VSTFK 550


>gi|315917346|ref|ZP_07913586.1| metal-dependent hydrolase [Fusobacterium gonidiaformans ATCC 25563]
 gi|313691221|gb|EFS28056.1| metal-dependent hydrolase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 269

 Score = 47.1 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 43/272 (15%), Positives = 80/272 (29%), Gaps = 17/272 (6%)

Query: 4   VTVATWNVNSIRARIHN------LAAWIKENNPDIICLQET--KTEDKNFPFETLQSLNY 55
           + + T NV+S             LA  I E   D+I LQE   K E +    E  +    
Sbjct: 5   MKLLTINVHSW-LEEKQEEKMELLAKVIAEKRYDVIALQEVNQKIEARLLKGEIREDNFL 63

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLP--GDDLDVQARFIEATFTINTQTLRIGNLYL 113
           +      + Y        +    I   +   G  L  +   +E      T +  + ++  
Sbjct: 64  YQLCKKIEKYTEEKYEYHWSHSHIGFDIYEEGIALLTRHSILEKEDFYCTNSKTVYSISS 123

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
                I   + + K              +E               +         +  DA
Sbjct: 124 RKIVKI-FLEIEGKEIEFYSCHMNLPDCIEENMEQNIQNILKHSSRNCLKILMGDFNTDA 182

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
                  Q   +          +   D   +Y     + +S  +    R+D+I L+ +  
Sbjct: 183 FHDESSYQKILEQGLFDSYTLSKKKDDGVTVYKNISGWENSVEEK---RLDYIFLTEQYE 239

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
             + S+ +    + +   SDH  + V L I E
Sbjct: 240 --VESSYVIFNGKNYPCISDHNGLEVILKIKE 269


>gi|255326905|ref|ZP_05367981.1| endonuclease/exonuclease/phosphatase family protein [Rothia
           mucilaginosa ATCC 25296]
 gi|255296122|gb|EET75463.1| endonuclease/exonuclease/phosphatase family protein [Rothia
           mucilaginosa ATCC 25296]
          Length = 292

 Score = 47.1 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 45/297 (15%), Positives = 87/297 (29%), Gaps = 43/297 (14%)

Query: 4   VTVATWNVNS------IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETL--QSLNY 55
           +   T N +S      I A+I  LA +I E   D+I LQE            +  + LNY
Sbjct: 1   MRFLTLNTHSWCEIHQI-AKIRTLAKFIIEQQVDVIALQEV----NQLTSTPVVKEPLNY 55

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
                     +  A+L          +  G   +         +    + + I +     
Sbjct: 56  RGGAGVPVHEDNYALLLVQAL-----NEMGATYEWTLTEAHIGWDRYDECVAILSRLPIR 110

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN--PIIWENDA 173
           G        +     ++R    A+  +E E    +    ++     D        +   +
Sbjct: 111 GIKPIDMSPEYGYHQVQRRAAQAA-LIETETGTFWCATTHMSWWDFDGEPLFAQEYTRLS 169

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF---WDYYADSWSKN---------KGI 221
               E   +   L    F  A   + + + L +     D  + +   +          G 
Sbjct: 170 QALAECALTAPVLLGGDFNSAAHLSDEGYALVTSSGMVDTRSLAEHTDGENTVHREIAGW 229

Query: 222 -------RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271
                  RID +       ++   A +          SDH+ +++ +D P     Q 
Sbjct: 230 EGNTDAKRIDFVFA-DRLLTVNSHAVVFRDN-SPEAISDHSGLLLEID-PSSWAPQS 283


>gi|239995602|ref|ZP_04716126.1| Endonuclease/exonuclease/phosphatase [Alteromonas macleodii ATCC
           27126]
          Length = 232

 Score = 47.1 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 38/273 (13%), Positives = 83/273 (30%), Gaps = 57/273 (20%)

Query: 7   ATWNVN-SI-RARI---HNLAAWIKENNPDIICLQE--TK------TED-KNFPFETLQS 52
            T+N++  I R +      +  ++  +  D++ LQE  T+       +D K+   E    
Sbjct: 1   MTYNIHSGIGRDKKHDYKRIGQFLANSGADVVLLQEMDTRPSERSTAQDVKDICAENTFK 60

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           L           + G AIL+++  +   T     +                  L + N +
Sbjct: 61  LIPSPAIRESDGWYGNAILTRFDVLAHDTLDVSQNGRQPRNVQIVELKTEKTPLTVVNTH 120

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                    +++      +   ++     L                             D
Sbjct: 121 KGLKKLERRSQFSLLHEHLSLKMKEKQIPLV-------------------------LAGD 155

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                   ++F+ L  +     + AT       S +  +A          +D + +S + 
Sbjct: 156 FNEWQFFSKAFKALNELLLQQKVGATFP-----SHFPVFA----------LDRVWVSDDI 200

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
              + + R           SDH PV+V +++P+
Sbjct: 201 --KVKACRKLKNA-KTRILSDHLPVLVDIELPQ 230


>gi|228994802|ref|ZP_04154600.1| Exonuclease III [Bacillus pseudomycoides DSM 12442]
 gi|228764910|gb|EEM13666.1| Exonuclease III [Bacillus pseudomycoides DSM 12442]
          Length = 49

 Score = 47.1 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 7/29 (24%), Positives = 14/29 (48%), Gaps = 2/29 (6%)

Query: 4  VTVATWNVNSIRA--RIHNLAAWIKENNP 30
          +   +WNVN +RA         +++E + 
Sbjct: 1  MKFISWNVNGLRAVIAKGGFIEYLEEADA 29


>gi|195996511|ref|XP_002108124.1| hypothetical protein TRIADDRAFT_20232 [Trichoplax adhaerens]
 gi|190588900|gb|EDV28922.1| hypothetical protein TRIADDRAFT_20232 [Trichoplax adhaerens]
          Length = 552

 Score = 47.1 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/276 (11%), Positives = 72/276 (26%), Gaps = 49/276 (17%)

Query: 28  NNPDIICLQETKTEDK---NFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLP 84
            N DIICLQE   +      F    ++ L Y      + +         +     +    
Sbjct: 285 YNADIICLQE--CDKDIFNQFYAPFMKGLGYDGIQDSKINNREGEATFYHMDRFNMIDHH 342

Query: 85  GDDLDVQARFIEATFTINTQT---------------------------LRIGNLYLPHGN 117
              +    +  E    I                               L + N +     
Sbjct: 343 CQSIGNTLKNDEIFEQICKCPTLKYRLLNRNSIVQIVTLQPKELENIRLVVVNTHFYFRP 402

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
             +  +     S +K   ++  + +  +  +++ GD+N  P+                  
Sbjct: 403 QASHIRILQGYSMLKCVEKYCEKFIGNDVRVLYCGDFNSHPRTALVKLMT----TGSVQS 458

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM---------- 227
                 +  +     +           ++ +  + + +       +D+I           
Sbjct: 459 NDPVWHEGGEEEFCENISLRNDKKCVSFTGYPQFTN-FVNGFVECLDYIFGQPEHFQVEQ 517

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           + P  T  + +A   T       PSDH  +   L +
Sbjct: 518 VFPSMTEEVAAA--YTALPSVVSPSDHVAIGCDLRL 551


>gi|290562521|gb|ADD38656.1| TRAF and TNF receptor-associated protein [Lepeophtheirus salmonis]
          Length = 346

 Score = 47.1 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 5/38 (13%)

Query: 6   VATWNVNSI-RA----RIHNLAAWIKENNPDIICLQET 38
           + TWNV+ + RA    R+  +   I++   DI+ LQE 
Sbjct: 95  LVTWNVDGLSRANLKVRVKAVCKIIEDTKVDIVFLQEV 132


>gi|307727145|ref|YP_003910358.1| endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1003]
 gi|307587670|gb|ADN61067.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1003]
          Length = 290

 Score = 47.1 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 17/38 (44%), Gaps = 4/38 (10%)

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           D I ++ +    + S  +D   R     SDH P+ + L
Sbjct: 256 DFIFVTEDLAPRVASCEVDPHSRS----SDHQPMWLEL 289


>gi|212536837|ref|XP_002148574.1| hypothetical protein PMAA_090370 [Penicillium marneffei ATCC 18224]
 gi|210068316|gb|EEA22407.1| hypothetical protein PMAA_090370 [Penicillium marneffei ATCC 18224]
          Length = 654

 Score = 47.1 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 23/59 (38%), Gaps = 11/59 (18%)

Query: 223 IDHIMLSPEATSLLHSA----RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQN 277
           ID  ++S      L S      ID         SDH P+   LDI  P+KK +   +  
Sbjct: 252 IDLTLISNGLLERLVSCVRGDDIDHD-------SDHWPIQTVLDITVPQKKSEKRRNWK 303


>gi|86741914|ref|YP_482314.1| endonuclease/exonuclease/phosphatase [Frankia sp. CcI3]
 gi|86568776|gb|ABD12585.1| Endonuclease/exonuclease/phosphatase [Frankia sp. CcI3]
          Length = 385

 Score = 47.1 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 22/63 (34%), Gaps = 21/63 (33%)

Query: 222 RIDHIMLSPEATSLLHSARIDTK---------------------PRGWTKPSDHTPVIVS 260
           R+D+I+LSP+    +   +I                         R     SDH  + V 
Sbjct: 323 RLDYILLSPDLADRMTGGQIVRTGLWGDPDNKHPSAQWVIHPKITRADQAASDHAALYVD 382

Query: 261 LDI 263
           LDI
Sbjct: 383 LDI 385


>gi|296130666|ref|YP_003637916.1| Endonuclease/exonuclease/phosphatase [Cellulomonas flavigena DSM
           20109]
 gi|296022481|gb|ADG75717.1| Endonuclease/exonuclease/phosphatase [Cellulomonas flavigena DSM
           20109]
          Length = 260

 Score = 47.1 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/269 (10%), Positives = 66/269 (24%), Gaps = 31/269 (11%)

Query: 4   VTVATWNV---NSI---RARIHNLAAWIKENNPDIICLQET-----KTEDKNFPFETLQS 52
           + +AT+N+    S+   R  +   A  ++  + D++ LQE      ++   +       +
Sbjct: 1   MRLATFNILHGRSLADGRVDLDRFADAVRRLDADVLALQEVDRAQSRSHGADLTAVAADA 60

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           +           +           +        D        +          + +  L 
Sbjct: 61  MG-----APHHRFAATLHGEPGLWVAGTGQEQPDTAAYGIALLSRRPVREWHVVALPALR 115

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                     ++   +    R    A    E     +       IP  +      +    
Sbjct: 116 RRTPVRFPGQRWPAFVRDEPRAALAAVVDGEGGPLTVVGTHLTFIPGWNVRQLRHLVRTT 175

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR-IDHIMLSPE 231
                                 +                A ++  +  +R +DH++  P 
Sbjct: 176 RRLPGACVVMGDLNLAGEQPARLTGMQPLV--------RAATFPVDAPVRQLDHVLAGPG 227

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
             +      +D         SDH  ++V 
Sbjct: 228 VHAAGPGDAVD------LGLSDHRALVVD 250


>gi|322503900|emb|CBZ38986.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 732

 Score = 47.1 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 7/43 (16%)

Query: 4  VTVATWNVNS-------IRARIHNLAAWIKENNPDIICLQETK 39
          + + +WNV         IR    ++  +      DIICLQE K
Sbjct: 1  MFLISWNVAGWSSTSQAIRESFGSIHDFFACTEADIICLQECK 43



 Score = 47.1 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 17/37 (45%)

Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
               Y+ WD   +   +N+G R+D+I++       + 
Sbjct: 469 CPCPYTCWDQSRNRRLENEGTRLDYILVDSALLPAVV 505


>gi|146104810|ref|XP_001469917.1| endonuclease/exonuclease protein-like protein [Leishmania
          infantum]
 gi|134074287|emb|CAM73033.1| endonuclease/exonuclease protein-like protein [Leishmania
          infantum JPCM5]
          Length = 732

 Score = 47.1 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 7/43 (16%)

Query: 4  VTVATWNVNS-------IRARIHNLAAWIKENNPDIICLQETK 39
          + + +WNV         IR    ++  +      DIICLQE K
Sbjct: 1  MFLISWNVAGWSSTSQAIRESFGSIHDFFACTEADIICLQECK 43



 Score = 47.1 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 17/37 (45%)

Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
               Y+ WD   +   +N+G R+D+I++       + 
Sbjct: 469 CPCPYTCWDQSRNRRLENEGTRLDYILVDSALLPAVV 505


>gi|255014700|ref|ZP_05286826.1| hypothetical protein B2_12389 [Bacteroides sp. 2_1_7]
          Length = 279

 Score = 47.1 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/269 (13%), Positives = 71/269 (26%), Gaps = 22/269 (8%)

Query: 4   VTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           + V ++N+         N  + R    A  +K    D+   QE      N     L    
Sbjct: 19  MNVMSYNIRYDNLGDKDNQWKFRRDFAADLVKFYEADVFGAQEVLNNQLNDLLNRLPEYA 78

Query: 55  YHIETCGQKSYNGVA--ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           Y           G    I  +     +         +      +  +    + +    + 
Sbjct: 79  YVGVGREDGKTKGEYAPIFYRKDRFSVDKSGNFWLAEDINAIGKKGWDAACERVATWAIL 138

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                       +  +  + +  R     L LE+    + +  II        P      
Sbjct: 139 KDKNTGKKFFFLNTHLDHMGKVARHEGASLVLEQAKKLSENLPIIVTGDFNAVPSDEPIQ 198

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                   +               A       ++F D+    + K +   ID+I +    
Sbjct: 199 VLTNPSDPR-------HLTHSRTIAGFTYGPKWTFHDFGKIPYDK-REW-IDYIFVKGNI 249

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
              +    + T+      PSDH PVI +L
Sbjct: 250 --KVLRHGVLTETLNNLFPSDHCPVISTL 276


>gi|156976926|ref|YP_001447832.1| hypothetical protein VIBHAR_05711 [Vibrio harveyi ATCC BAA-1116]
 gi|156528520|gb|ABU73605.1| hypothetical protein VIBHAR_05711 [Vibrio harveyi ATCC BAA-1116]
          Length = 287

 Score = 47.1 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 38/290 (13%), Positives = 80/290 (27%), Gaps = 54/290 (18%)

Query: 2   SVVTVATWNV-----NSIR-ARIHN----LAAWIKENNPDIICLQET-------KTEDKN 44
           + V + +WN+     +  + +R       L  ++ +   DI+  QE        K    +
Sbjct: 20  NSVNLTSWNIEWLSIDGGKVSRTPQDFEKLNHYVDKTQADILAFQEVENAAAVQKAVGND 79

Query: 45  F-----PFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDD--LDVQARFIEA 97
           F           + +       Q +   V            +   G+          +  
Sbjct: 80  FTIYLSDRSNASNRHLQFNDTNQYTGFAVRNGVSVLDKPDFSITRGNSKLRFASYLVLNP 139

Query: 98  TFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII 157
                T  L +       G    +          +   ++   R + ++  +  GD+N  
Sbjct: 140 DQDNETHLLSVHLKAGCSGAYRNNRDCKIVKQQGQALAKWIKAREDNKQQYVVLGDFNHN 199

Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK 217
                 +   +  ++        +   K                 H +            
Sbjct: 200 LGYRGDWLWEVLSDNT-----DAKLVTKNTKAECKVRSNRNPKKTHQF------------ 242

Query: 218 NKGIR--IDHIMLSPEATSLLHSARIDTKPRGWT----KPSDHTPVIVSL 261
               R  IDHI++S +  +   S+ + T  +       K SDH PV  +L
Sbjct: 243 ----RSVIDHIIVSGDLKA---SSGVQTVFKTQDVLDYKLSDHCPVSTTL 285


>gi|145224965|ref|YP_001135643.1| endonuclease/exonuclease/phosphatase [Mycobacterium gilvum PYR-GCK]
 gi|145217451|gb|ABP46855.1| Endonuclease/exonuclease/phosphatase [Mycobacterium gilvum PYR-GCK]
          Length = 269

 Score = 47.1 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/276 (12%), Positives = 71/276 (25%), Gaps = 43/276 (15%)

Query: 4   VTVATWNVNSIRAR-------IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56
           + + T+N+  +  R       +      +   + DI+ LQE  +         L +L   
Sbjct: 7   MKLVTFNI--LHGRTPGAEVDLDRFVDCVAGLDADILALQEVDSIQARSGLADLTALAAE 64

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL-RIGNLYLPH 115
                   +      +        T             + + +   +  + R+  +  P 
Sbjct: 65  AMGARSHRFVAAIAGTPGATWMAATGEEQPGTAAYGVALLSRYPAVSWQVARLPRIPFPF 124

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
              +   +    +    R          L E  +     + +P   + Y       D   
Sbjct: 125 PLYLREPRKVVVVHEEPRAAVIGRFDTPLGELTVANTHLSFVPG-WNRYQLHHLMRDVRG 183

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDY-----YADSWSKNKGIR-IDHIMLS 229
                     L                     W        A ++  ++  R +DH++  
Sbjct: 184 LPSPWIVTGDLNMPAKPARR------------WSRLRCLASAPTFPADRPTRQLDHVLTD 231

Query: 230 PEATSLLHSARIDTKPRGWTKP----SDHTPVIVSL 261
             A             R +  P    SDH P++V L
Sbjct: 232 EPAF----------TIRSYDTPEMAISDHRPLVVDL 257


>gi|170739956|ref|YP_001768611.1| endonuclease/exonuclease/phosphatase [Methylobacterium sp. 4-46]
 gi|168194230|gb|ACA16177.1| Endonuclease/exonuclease/phosphatase [Methylobacterium sp. 4-46]
          Length = 259

 Score = 47.1 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 47/132 (35%), Gaps = 11/132 (8%)

Query: 5   TVATWNVNSIR---ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
            + +WN+  +R   A +  +AA I +  PD++ +QE   E    P        Y+     
Sbjct: 25  KIISWNL--LRRTGATVEAVAALIAQEKPDLLLMQEATAEITALPERVG---GYYAWAPL 79

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
            +  +G+A+ S          +P       A        ++     I N++L HG  +  
Sbjct: 80  PRRIHGLAMWSPAPFPAPPRSIPI---PSGALVDRVAQVLDCGAFGIANVHLSHGQVLNR 136

Query: 122 TKYDDKISWIKR 133
            +       +  
Sbjct: 137 RQLRRIEQHLPA 148


>gi|289618020|emb|CBI55597.1| unnamed protein product [Sordaria macrospora]
          Length = 541

 Score = 47.1 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 41/324 (12%), Positives = 80/324 (24%), Gaps = 69/324 (21%)

Query: 6   VATWNVNSIR----ARIHNLAAW-----IKENNPDIICLQETKTEDKNFP--FETLQSLN 54
           + T N   ++     R   L        I +  P I+ LQE    +       ET   L 
Sbjct: 10  IVTLNCWGLKYISKLRRERLLEIGRQLAIADPQPQIVALQECFCHEDYLTIRRETRYILP 69

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT----------- 103
           Y           G+AILSK+   E        +    A +    +               
Sbjct: 70  YGKFYFAGAFGGGLAILSKWPIEESTMFRYPLNGRPTAFWRGDWYVGKGIACAKIRYGSG 129

Query: 104 --QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFAS------------------QRLE 143
               + + N +        + K         +    +                     L 
Sbjct: 130 PKHIIEVFNTHTHAPYESGTPKDSYVCHRTAQSWEMSKLLRGAAERGHLVLGLGDFNMLP 189

Query: 144 LEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHH 203
           +         +  +       +P      A    E  ++          + ++    +  
Sbjct: 190 MSLEHHIVTAHAPVHDVWRVLHPDSSVGPAHHPPE--KARNVPVPTAQENILKNCATSDG 247

Query: 204 LYSFWDYYAD----------------SWSKNKGIRIDHIML-SPEATSL-----LHSARI 241
            ++ W +                   S    +G R+D+I   + +  +      +  A +
Sbjct: 248 PFNTWRWLPKHQKKLGIGKPVVTVDPSTPDLRGKRLDYIFAGTGDVAANGGGWVVKRAAV 307

Query: 242 ---DTKPRGWTKPSDHTPVIVSLD 262
                 P      SDH  V  +L 
Sbjct: 308 GMMMRHPELGCSLSDHFAVEATLK 331


>gi|303282399|ref|XP_003060491.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226457962|gb|EEH55260.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 514

 Score = 47.1 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/82 (14%), Positives = 22/82 (26%), Gaps = 15/82 (18%)

Query: 196 RATHDTHHLYSFWDYYA---DSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP- 251
               D     +++ +         K +G+R+D+  +S             T         
Sbjct: 222 HLHGDARRACTWYGHPGVVATGRYKGRGMRLDYFFVSDGLERAAVECAQATDAYSDKPAA 281

Query: 252 -----------SDHTPVIVSLD 262
                      SDH  V + L 
Sbjct: 282 LEQRPDDAFFGSDHCGVYLKLK 303


>gi|298375899|ref|ZP_06985855.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 3_1_19]
 gi|298266936|gb|EFI08593.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 3_1_19]
          Length = 287

 Score = 47.1 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 38/269 (14%), Positives = 72/269 (26%), Gaps = 22/269 (8%)

Query: 4   VTVATWNV---NS------IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           + V ++N+   NS       + R    A  +K    D+   QE      N     L    
Sbjct: 27  MNVMSYNIRYDNSGDKDNQWKFRRDFAADLVKFYEADVFGAQEVLNNQLNDLLNRLPEYA 86

Query: 55  YHIETCGQKSYNGVA--ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           Y           G    I  +     +         +      +  +    + +    + 
Sbjct: 87  YVGVGREDGKTKGEYAPIFYRKDRFSVDKSGNFWLAEDINAIGKKGWDAACERVATWAIL 146

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                       +  +  + +  R     L LE+    + +  II        P      
Sbjct: 147 KDKNTGKKFFFLNTHLDHMGKVARHEGASLVLEQAKKLSENLPIIVTGDFNAVPSDEPIQ 206

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                   +               A       ++F D+    + K +   ID+I +    
Sbjct: 207 VLTNPSDPR-------HLTHSRTIAGFIYGPEWTFHDFGKIPYDK-REW-IDYIFVKGNI 257

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
              +    + T+      PSDH PVI +L
Sbjct: 258 --KVLRHGVLTETLNNLFPSDHCPVISTL 284


>gi|261336140|dbj|BAI44772.1| pol-like protein [Alternaria alternata]
          Length = 1295

 Score = 47.1 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/279 (8%), Positives = 70/279 (25%), Gaps = 27/279 (9%)

Query: 2   SVVTVATWNVN-SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           + +++  +NV+ S    + ++    + +  DI+ +QE                       
Sbjct: 5   NTLSILQYNVHKSRNMVMASMLRDPRIHEYDILAIQE----------------------- 41

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
             ++          + +  +    G +             ++ +  +         +   
Sbjct: 42  PWRNPFVATTHHPAKRVFHLCCPAGSEAGPARVCFFINKRLDHKKWQFKEHSRDICSLTV 101

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
               D +           +     E       D   I   +     I+  +         
Sbjct: 102 EFGDDQQEEQNVIIHNVCNPARRSESDSTVLVDVRTILHDNQSSEQILLGDFDLHHPMWG 161

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            +  +  +    D +    D +   +          +     ID  +++      +  ++
Sbjct: 162 GTGVRHIDPKSADLLAIMEDFNLGSTLPPGTITYEERTSRTTIDLCLVTVGLVDRVVRSQ 221

Query: 241 IDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMK 279
           +D         SDH P+   +D+   +            
Sbjct: 222 VDRD---LDHDSDHLPISTVIDMRIQQLDATPKRDWKRL 257


>gi|225858569|ref|YP_002740079.1| metal-dependent hydrolase [Streptococcus pneumoniae 70585]
 gi|225721773|gb|ACO17627.1| metal-dependent hydrolase [Streptococcus pneumoniae 70585]
          Length = 271

 Score = 47.1 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/272 (11%), Positives = 73/272 (26%), Gaps = 14/272 (5%)

Query: 4   VTVATWNVNSI--RARIHNL---AAWIKENNPDIICLQETK-------TEDKNFPFETLQ 51
           +   T N +S   +            I E + D+IC QE          E  +       
Sbjct: 1   MKFLTLNTHSWMEKEAEEKFQILLEDILEKDYDLICFQEINQEMTSSEVEVNDLYQALPA 60

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
           +   H +   +     ++   K        +  G +   +   I +   I  + + + ++
Sbjct: 61  AEPIHQDHYVRLLVEKLSEQGKNYYWTWAYNHIGYNRYHEGVAILSKTPIEAREILVSDV 120

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
             P           + +   K     +      ++                    ++  +
Sbjct: 121 DDPTDYHTRRVALAETVVDGKELAVASVHLSWWDKGFQEEWARFEAVLKKLNKPLLLAGD 180

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
                 +          +G  DA     +    Y+            + +RID++  + E
Sbjct: 181 FNNPAGQEGYQAILASPLGLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTTKE 240

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
               + +  +        + SDH  +   L+ 
Sbjct: 241 LA--VENLHVVFDGNKSPQVSDHYGLNAILNW 270


>gi|120435157|ref|YP_860843.1| hypothetical protein GFO_0800 [Gramella forsetii KT0803]
 gi|117577307|emb|CAL65776.1| conserved hypothetical protein, membrane [Gramella forsetii KT0803]
          Length = 344

 Score = 47.1 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 44/267 (16%), Positives = 76/267 (28%), Gaps = 38/267 (14%)

Query: 6   VATWNVNSIRA-----RIH---NLAAWIKENNPDIICLQETKTEDKNFPFETLQS-LNYH 56
           + ++NV    A     R      +  +IKENNPDI+C+QE            L     Y 
Sbjct: 103 LMSYNVRMFNAYEWSDRKDIPEKITGFIKENNPDILCVQE-----HYIGAAALSEVYPYE 157

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                 K+    + +    PI     L                     T+R+ N++    
Sbjct: 158 YIKLKGKNAEFGSAIFSKYPIINQASLDFPHDGNNNAIFTDLVIDKKDTVRVYNVHFQSL 217

Query: 117 NP-ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
           N          + S            L+ E+  I   D    P            + +  
Sbjct: 218 NIKPGIDDLQKEDSKKLLGRIGYGFSLQQEQAEILLADIKKSPYRTIIAGDFNNTSFSYI 277

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK-GIRIDHIMLSPEATS 234
              ++Q  +                          +  S+  N   +RID +++      
Sbjct: 278 YDLIKQDDRFNDAFLEAG---------------SGFGKSFKLNYFPLRIDFLLIENNM-- 320

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261
            ++  RI          SDH PV+  +
Sbjct: 321 KINEFRILD-----IDYSDHYPVLTKI 342


>gi|283853514|ref|ZP_06370755.1| Endonuclease/exonuclease/phosphatase [Desulfovibrio sp. FW1012B]
 gi|283571095|gb|EFC19114.1| Endonuclease/exonuclease/phosphatase [Desulfovibrio sp. FW1012B]
          Length = 251

 Score = 47.1 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 28/67 (41%), Gaps = 9/67 (13%)

Query: 2  SVVTVATWNVNSIRA---RIH--NLAAWIKENNPDIICLQET----KTEDKNFPFETLQS 52
          +++ VAT+NV+  ++   R         I+E   D++ LQE       E++         
Sbjct: 7  ALLRVATYNVHGWKSLGGRRDIGRFVETIRELAADVVALQEVVMPPLIEEECLERAVAGP 66

Query: 53 LNYHIET 59
          L  H  +
Sbjct: 67 LGMHAVS 73


>gi|224025826|ref|ZP_03644192.1| hypothetical protein BACCOPRO_02568 [Bacteroides coprophilus DSM
           18228]
 gi|224019062|gb|EEF77060.1| hypothetical protein BACCOPRO_02568 [Bacteroides coprophilus DSM
           18228]
          Length = 311

 Score = 47.1 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 45/293 (15%), Positives = 85/293 (29%), Gaps = 41/293 (13%)

Query: 2   SVVTVATWNV------N--SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + + V +WN+      N    +     +   +K++  D+I + ET             SL
Sbjct: 28  NTLKVLSWNIWHEGHSNKYG-KQACDGVIGVLKKSEADVILMIETYGASDKVAD----SL 82

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
            Y+     +   + ++I S+Y  ++  T                      +       YL
Sbjct: 83  GYY----HRLLSSNLSIYSRYPIVKTYTFPDQISTFNFGGVEILMHGKKVRIFDTWLHYL 138

Query: 114 PHGNPITSTKYDDKISWIKRFLRFA-----------SQRLELEEPLIFAGDYNIIPQPHD 162
           P    + + K + +I                         E +   +  G    I    D
Sbjct: 139 PDARCVPTEKSEAEILAWDDAGTRDDEIRTIISILKPFIAESDSIPMIMGGDFNIHSHLD 198

Query: 163 CYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY--SFWDYYADSWSK-NK 219
                    +    +      + ++  GF D+ R  +        + W   ADS    N+
Sbjct: 199 WTEATKNLYNHGGAVVNWTVSKSMEEAGFIDSFREVNPDPVKNIGTTWLTAADSLETPNR 258

Query: 220 GIRIDHIMLSPEATSLLHSARIDTKPRGWT---------KPSDHTPVIVSLDI 263
             RID+I      T    +++      G             SDH  V+    I
Sbjct: 259 QDRIDYIYY-QGKTIKATASQCYDNYLGKQFQFEGEPFFYGSDHGFVLTEFSI 310


>gi|326332555|ref|ZP_08198824.1| endonuclease/exonuclease/phosphatase family protein
          [Nocardioidaceae bacterium Broad-1]
 gi|325949647|gb|EGD41718.1| endonuclease/exonuclease/phosphatase family protein
          [Nocardioidaceae bacterium Broad-1]
          Length = 271

 Score = 47.1 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 1/35 (2%)

Query: 4  VTVATWNVNSIRARIHNLAAWIKENNPDIICLQET 38
          + + + N     AR  +LAAW+     D++CLQE 
Sbjct: 1  MRIVSVNAWGG-ARYDDLAAWLPTAGADVVCLQEV 34


>gi|325964365|ref|YP_004242271.1| metal-dependent hydrolase [Arthrobacter phenanthrenivorans Sphe3]
 gi|323470452|gb|ADX74137.1| metal-dependent hydrolase [Arthrobacter phenanthrenivorans Sphe3]
          Length = 275

 Score = 47.1 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/275 (13%), Positives = 68/275 (24%), Gaps = 34/275 (12%)

Query: 2   SVVTVATWNVNS----IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ---SLN 54
           + V + TWNV       + R   + A + +  PDI+ L E+ T  ++     L     L 
Sbjct: 18  TTVRIVTWNVWGRYGPWQEREAAVIATLTDARPDIVVLTESWTTAEDSQCARLAGPLGLP 77

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           +H  +      +  A+                      R  +AT       + +      
Sbjct: 78  HHAFSGVPAQEDESALSGVAVLSRWPITAQAGMDFGALRVQQATIAGPRGPITVY----- 132

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
            G  + +   D      +             +               D     ++     
Sbjct: 133 -GGVMDAWWPDQGRQRQEAVRALLEHLKTSWDDRTPLVVCGDFNADPDSDEIRMFTGRVA 191

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM------- 227
             +     +   +  G        +        W      W      RID++        
Sbjct: 192 APVPGLSFYDAWEAGGTERGCTWANTNP-----WATQLL-WPD---RRIDYVFTGMPRRG 242

Query: 228 -LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
                  + L   R    P     PSDH  +   L
Sbjct: 243 GAGHPLAAELLGTR----PLHGMYPSDHLALQADL 273


>gi|218439253|ref|YP_002377582.1| endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 7424]
 gi|218171981|gb|ACK70714.1| Endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 7424]
          Length = 262

 Score = 47.1 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 44/272 (16%), Positives = 75/272 (27%), Gaps = 28/272 (10%)

Query: 3   VVTVATWNV----------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52
           ++ + T+N+          N  + R   +A+ I   +PD+I  QE K          L  
Sbjct: 2   LLKLITFNIRYDKPDPDDHN-WKVRRKAIASVITHYSPDLIGTQEGKAHQ-------LLD 53

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           L+  +        +     S             + L+    F+  T  I           
Sbjct: 54  LHRMLPHYQSVGGDRTGTRSNEHCSIFYHSQRLNCLETGDFFLSETPEIPGSITESWGNP 113

Query: 113 LPHGNPITSTK---YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
            P        +      KI      L + S++       +     + +            
Sbjct: 114 HPRMVTWAIFQGLDEPKKIILFNTHLDYYSEKARELGAKLIYERLSQLDVTDTYLFVTAD 173

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
            N    T+  +     L      D   A        SF  +  ++        ID I   
Sbjct: 174 FNATPETVTRKTFETPLPEGRQLDDALAQLPLEDQKSFNHFTEEATDA-----IDTIYYD 228

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
                 L +A +D +      PSDH PVI   
Sbjct: 229 SRV--KLQNAFVDRQKWEGVIPSDHFPVIGEF 258


>gi|150008872|ref|YP_001303615.1| hypothetical protein BDI_2262 [Parabacteroides distasonis ATCC
           8503]
 gi|256841134|ref|ZP_05546641.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|149937296|gb|ABR43993.1| conserved hypothetical protein [Parabacteroides distasonis ATCC
           8503]
 gi|256736977|gb|EEU50304.1| conserved hypothetical protein [Parabacteroides sp. D13]
          Length = 287

 Score = 47.1 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 38/269 (14%), Positives = 72/269 (26%), Gaps = 22/269 (8%)

Query: 4   VTVATWNV---NS------IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           + V ++N+   NS       + R    A  +K    D+   QE      N     L    
Sbjct: 27  MNVMSYNIRYDNSGDKDNQWKFRRDFAADLVKFYEADVFGAQEVLNNQLNDLLNRLPEYA 86

Query: 55  YHIETCGQKSYNGVA--ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           Y           G    I  +     +         +      +  +    + +    + 
Sbjct: 87  YVGVGREDGKTKGEYAPIFYRKDRFSVEKSGNFWLAEDINAIGKKGWDAACERVATWAIL 146

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                       +  +  + +  R     L LE+    + +  II        P      
Sbjct: 147 KDKNTGKKFFFLNTHLDHMGKVARHEGASLVLEQAKKLSENLPIIVTGDFNAVPSDEPIQ 206

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                   +               A       ++F D+    + K +   ID+I +    
Sbjct: 207 VLTNPSDPR-------HLTHSRTIAGFIYGPEWTFHDFGKIPYDK-REW-IDYIFVKGNI 257

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
              +    + T+      PSDH PVI +L
Sbjct: 258 --KVLRHGVLTETLNNLFPSDHCPVISTL 284


>gi|50736245|ref|XP_419093.1| PREDICTED: similar to RP1-30M3.3 [Gallus gallus]
          Length = 369

 Score = 47.1 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 9/44 (20%)

Query: 2   SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQET 38
           S  ++ TWN++ +       RAR   + +++   +PD++ LQE 
Sbjct: 119 SSFSLITWNIDGLDLGNLQERAR--GVCSYLALYSPDVVFLQEV 160


>gi|167950579|ref|ZP_02537653.1| endonuclease/exonuclease/phosphatase family protein [Endoriftia
           persephone 'Hot96_1+Hot96_2']
          Length = 62

 Score = 47.1 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 27/64 (42%), Gaps = 14/64 (21%)

Query: 202 HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
            +L++F  +            +DHI+ SP     +    +          SDH P+++ +
Sbjct: 5   CNLHTFPSWRPKRK-------LDHILASPSL--RVARTEVLHYT-----HSDHLPIMLEI 50

Query: 262 DIPE 265
           ++P+
Sbjct: 51  ELPD 54


>gi|149923487|ref|ZP_01911890.1| hypothetical protein PPSIR1_41059 [Plesiocystis pacifica SIR-1]
 gi|149815678|gb|EDM75207.1| hypothetical protein PPSIR1_41059 [Plesiocystis pacifica SIR-1]
          Length = 343

 Score = 47.1 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/294 (11%), Positives = 67/294 (22%), Gaps = 37/294 (12%)

Query: 4   VTVATWNVNSIRAR-----IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL--NYH 56
           + V +WN+ + R       +  L   I+  +PDI+ +QE K        E L +L   + 
Sbjct: 61  LRVVSWNLENFRGDPEDHDLERLRQTIEAVDPDILAVQEIK------DPEALAALLPGWG 114

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
           I            +   ++   +       +               +   R         
Sbjct: 115 IALSKGGGRGHQKLGVAWRRDRVELVGQPVEHRELTLSGRVRPA-FSAYFRDAARSSASE 173

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
                  +   +           +  +    +      +     H               
Sbjct: 174 ASPPLDLWVTVVHLKAMPTGHEDRTTQWPALVEAVRGLSKRDPDHVVLGDFNSTGAPGEG 233

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
                +                 +    Y +     D+W   +   ID + +       L
Sbjct: 234 TATEHAELDAALRPADLRRLPNSEGCSAY-YDGARRDAWK--EASEIDLVWV-RGLEGAL 289

Query: 237 -----------HSARIDTKPRGWT--------KPSDHTPVIVSLDIPEPRKKQQ 271
                       +A      R             SDH PVI+ L   EP     
Sbjct: 290 GADPAVHSGTHCAAHHCRDFRSTEAYPEPDYSFLSDHCPVILDLRRGEPDGPAD 343


>gi|148989840|ref|ZP_01821134.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae SP6-BS73]
 gi|148992423|ref|ZP_01822118.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae SP9-BS68]
 gi|168488429|ref|ZP_02712628.1| metal-dependent hydrolase [Streptococcus pneumoniae SP195]
 gi|168492909|ref|ZP_02717052.1| metal-dependent hydrolase [Streptococcus pneumoniae CDC3059-06]
 gi|221231555|ref|YP_002510707.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae ATCC 700669]
 gi|225854267|ref|YP_002735779.1| metal-dependent hydrolase [Streptococcus pneumoniae JJA]
 gi|237650468|ref|ZP_04524720.1| metal-dependent hydrolase [Streptococcus pneumoniae CCRI 1974]
 gi|237821902|ref|ZP_04597747.1| metal-dependent hydrolase [Streptococcus pneumoniae CCRI 1974M2]
 gi|147924782|gb|EDK75866.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae SP6-BS73]
 gi|147928740|gb|EDK79753.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae SP9-BS68]
 gi|183572906|gb|EDT93434.1| metal-dependent hydrolase [Streptococcus pneumoniae SP195]
 gi|183576858|gb|EDT97386.1| metal-dependent hydrolase [Streptococcus pneumoniae CDC3059-06]
 gi|220674015|emb|CAR68528.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae ATCC 700669]
 gi|225723039|gb|ACO18892.1| metal-dependent hydrolase [Streptococcus pneumoniae JJA]
 gi|332073115|gb|EGI83594.1| endonuclease/Exonuclease/phosphatase family protein [Streptococcus
           pneumoniae GA17570]
          Length = 271

 Score = 47.1 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/272 (11%), Positives = 72/272 (26%), Gaps = 14/272 (5%)

Query: 4   VTVATWNVNSI--RARIHNL---AAWIKENNPDIICLQETK-------TEDKNFPFETLQ 51
           +   T N +S   +            I E + D+IC QE          E  +       
Sbjct: 1   MKFLTLNTHSWMEKEAEEKFQILLEDILEKDYDLICFQEINQEMTSSEVEVNDLYQALPA 60

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
           +   H +   +     +    K        +  G D   +   I +   I  + + + ++
Sbjct: 61  AEPIHQDHYVRLLVEKLLEQGKNYYWTWAYNHIGYDRYHEGVAILSKTPIEAREILVSDV 120

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
             P           + +   K     +      ++                    ++  +
Sbjct: 121 DDPTDYHTRRVALAETVVDGKELAVASVHLSWWDKGFQEEWARFEAVLKKLNKPLLLAGD 180

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
                 +          +G  DA     +    Y+            + +RID++  + E
Sbjct: 181 FNNPAGQEGYQAILASPLGLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTTKE 240

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
               + +  +        + SDH  +   L+ 
Sbjct: 241 LA--VENLHVVFDGNKSPQVSDHYGLNAILNW 270


>gi|149187906|ref|ZP_01866202.1| putative phospholipase C precursor [Vibrio shilonii AK1]
 gi|148838302|gb|EDL55243.1| putative phospholipase C precursor [Vibrio shilonii AK1]
          Length = 442

 Score = 47.1 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 39/283 (13%), Positives = 81/283 (28%), Gaps = 43/283 (15%)

Query: 4   VTVATWNVNSIRA-------RIHNLAAWIKENNPDIICLQETKTE-DKNFPFETLQSLNY 55
           + + T+N+ ++ A       R   +  ++K    D++ LQE        F  E  +   Y
Sbjct: 178 LKLMTYNIWALPAIASHIGDRYELIPEYVK--GYDVLALQEVFASGRDAFLRELAKEYPY 235

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
             +   ++  N             + +         +               I      H
Sbjct: 236 QTKMLDKEGINIYDGGVIIVSRYPIVNEAQYVFPDCSGTDCFADKGVNYAEVIKGGQAYH 295

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
                +  +D   +   R         + ++    A   +I       Y+     N   F
Sbjct: 296 VFATHTASFDTDTARDYRQ-------RQFKQIRALAQSLDIPANEAVIYSGDFNVNKLKF 348

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYS--FWDYYADSWS-------KNKGIRIDHI 226
             +                +  +   +  Y+   +D   + ++        N    +D++
Sbjct: 349 PDDY---------QQMMTNLNVSEPQYSGYTASTFDPRINDFAGGALSGGANVEY-LDYV 398

Query: 227 MLSPEA-TSLLHSARID----TKPRGWTK--PSDHTPVIVSLD 262
           M+S E  T   +  R+D    T    W     SDH PV   + 
Sbjct: 399 MVSNEYGTKSYNDNRVDVPRTTDESLWKHYNLSDHFPVTAVIK 441


>gi|315922569|ref|ZP_07918809.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313696444|gb|EFS33279.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 314

 Score = 47.1 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 42/269 (15%), Positives = 81/269 (30%), Gaps = 26/269 (9%)

Query: 4   VTVATWNV-----N-----SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + V ++N+     N     S  AR       I+E  P +I +QE +     +  E  +  
Sbjct: 59  IKVMSFNIRYYNTNDTGDKSWDARTAAFIPMIEEQKPTVIGMQEARPPQLKWLEENWKDY 118

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
            Y  +     + N    +  +   + V  +  D   +              T+       
Sbjct: 119 GYIGKGRRANNANNDEFVPIFYRKKAVELVKWDCFWLSETPDVPGSQGWDNTV-PRVATW 177

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
                I S K    I+         +    +E  +    + N    P         + D+
Sbjct: 178 AIFKHIASGKKFFFINTHIDVGSTIAPGKSMEVIVNKMSELNPEGLPMLLTADFNKQIDS 237

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
                V+     +             D+ + Y+ +   A+ +       +DHI  +    
Sbjct: 238 DIFNGVKTFMTNV------RLSAPVTDSKYSYTGFGT-ANPYI------VDHIFCTG--F 282

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
             L    ID   +  T  SDH P++  L+
Sbjct: 283 KALKFETIDKVYQNITYISDHYPIVGKLE 311


>gi|224012699|ref|XP_002295002.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220969441|gb|EED87782.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 400

 Score = 47.1 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/285 (11%), Positives = 70/285 (24%), Gaps = 40/285 (14%)

Query: 3   VVTVATWNVNSIRARIHNL-----AAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57
           ++ VA  N+N                 I+E   DII + E    ++ + ++  Q      
Sbjct: 54  ILRVAINNINGTTFHQKGFEVAHEIQTIQELGIDIIAMCE---SNRAWTYKNKQEYERQT 110

Query: 58  ETCGQKSYNGVAIL-------------------SKYQPIEIVTHLPGDDLDVQARFIEAT 98
                 +    A                     +  +     T+       ++ R     
Sbjct: 111 HLLWHNTRTVFASCPTGAEGYQPGGNVLNINGPAAGRVKATGTNKWERFCWMELRGQRDE 170

Query: 99  FTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP 158
             +     R+          +T+              R   ++  L++ L          
Sbjct: 171 GWVIISAYRVCQEESHRPGALTAYMQQYTAMLSAGITRPNPRQQILDDLLHLITSKREQG 230

Query: 159 QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN 218
                      +       + + +                  +   Y+      +S    
Sbjct: 231 FRPILLMDANEDWVTNSHGKNQLADFMAAANLQDAFYERHQQSPPTYT----RGNS---- 282

Query: 219 KGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              R+D+I++ P A+  +          G    SDH    V  D+
Sbjct: 283 ---RLDYILVDPVASPCIRRVGYLGTHEGN--FSDHCLEYVDFDM 322


>gi|167523032|ref|XP_001745853.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163775654|gb|EDQ89277.1| predicted protein [Monosiga brevicollis MX1]
          Length = 513

 Score = 47.1 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 41/288 (14%), Positives = 75/288 (26%), Gaps = 43/288 (14%)

Query: 17  RIHNLAAWIKENNPDIICLQET-----------KTEDKNFP-------------FETLQS 52
           R   +   I + + DIICLQE            K  ++++                  Q+
Sbjct: 223 RKQQILKDILQYSSDIICLQEVASGQFYSYFQHKLRERDYQGLYHPKSRVRTMSDADRQT 282

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN--------TQ 104
           ++          +  V             +  G    +    I+    +          +
Sbjct: 283 VDGCAIFFHVSKFKLVKEHCIEFERSATRYASGCADMLNRVMIKDNIALCALLERQSTGE 342

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
              + NL+L         K    +  ++    F  +      P++  GD+N +      Y
Sbjct: 343 KFFVCNLHLTWDPKFRDVKVIQTVLALREIENFLKEHNCPNIPVMIMGDFNSMH-DSGVY 401

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRID 224
             +         L              +  +         Y     Y++      GI ID
Sbjct: 402 ELMENGKYCVQPLMGEDWGYDYSKFIESVGLHHNLKLRSAYGNELPYSNYTPTFVGI-ID 460

Query: 225 HIMLS------PEATSLLHSARIDTKPRGWTKP---SDHTPVIVSLDI 263
           +I  S            +  A I     G   P   SDH  +     I
Sbjct: 461 YIWYSAERLIPSALLGPVEEAYIQEHVDGCPNPHFASDHLALSAEFRI 508


>gi|119485593|ref|ZP_01619868.1| hypothetical protein L8106_24460 [Lyngbya sp. PCC 8106]
 gi|119456918|gb|EAW38045.1| hypothetical protein L8106_24460 [Lyngbya sp. PCC 8106]
          Length = 258

 Score = 47.1 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/268 (13%), Positives = 78/268 (29%), Gaps = 20/268 (7%)

Query: 4   VTVATWNVN------SIRA---RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           + + T+NV          A   R   +A  + E + D++  QE K        +  + L+
Sbjct: 1   MKIVTFNVRFDKPDPGNNAWVWRRQVMAQLMAEWDADLVGTQEGKAHQ---LLDLHRRLS 57

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
            +      +  NG++        +             ++  +   ++  +        + 
Sbjct: 58  NYQTVGVDRQGNGLSEYCAIFYHQQRWRCLKTGDFWLSKTPKLVGSVTAEWENPVPRMVS 117

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
            G        D  I        + SQR       + +   +        +      N   
Sbjct: 118 WGVFEGVG-QDKPIIIFNTHFDYHSQRARELSAQLISDRLSQFNADEYLFIVTGDFNAEP 176

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
            +   +   + L N        A  D     ++ ++    ++      +D I        
Sbjct: 177 DSFTRKTLLKPLTNGVVLCDTLADIDLDEQMTYHEFTGKGFAA-----VDTIYYDSRL-- 229

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
            LH   +D     +  PSDH PVI   +
Sbjct: 230 NLHQVSVDRTQIDYVWPSDHFPVIAQFN 257


>gi|9885288|gb|AAG01389.1|AF199494_1 nocturnin [Homo sapiens]
          Length = 278

 Score = 47.1 bits (110), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/263 (14%), Positives = 65/263 (24%), Gaps = 28/263 (10%)

Query: 21  LAAWIKENNPDIICLQETKTEDKNFPFE--TLQSLNYHIETCGQKSYNGVAILSKYQPIE 78
           +   I    PDI+CLQE    D  F      L  L Y      +         S    +E
Sbjct: 26  ILEEILAYQPDILCLQEV---DHYFDTFQPLLSRLGYQGTFFPKP-------WSPCLDVE 75

Query: 79  IVTHLPGD--DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
                 G           +  +  I    + +    +     +   +   +       L+
Sbjct: 76  HNNGPDGCALFFLQNRFKLVNSANIRLTAMTLKTNQVTIAQTLECKESGRQFCIAVTHLK 135

Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN----MGFT 192
             +               N+         P+I   D               +        
Sbjct: 136 ARTGWERFRSAQGCDLLQNLQNITQGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAY 195

Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP------EATSLLHSARIDTKPR 246
             + A   +   Y+ W        ++    +D+I  S        A  LL   +I     
Sbjct: 196 KLLSADGQSEPPYTTWKIRTSGECRHT---LDYIWYSKHALNVRSALDLLTEEQIGPNRL 252

Query: 247 -GWTKPSDHTPVIVSLDIPEPRK 268
             +  PSDH  ++      E   
Sbjct: 253 PSFNYPSDHLSLVCDFSFTEESD 275


>gi|330720429|gb|EGG98744.1| Endonuclease/exonuclease/phosphatase family protein [gamma
           proteobacterium IMCC2047]
          Length = 242

 Score = 46.7 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 11/49 (22%)

Query: 221 IR----IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
            R    +DHI++SP+    +  A +          SDH P+ V +++P 
Sbjct: 195 WRPVSNLDHILVSPDL--RVKWAEVVPYAL-----SDHLPLAVEIEMPS 236


>gi|260174301|ref|ZP_05760713.1| hypothetical protein BacD2_20756 [Bacteroides sp. D2]
          Length = 304

 Score = 46.7 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 42/269 (15%), Positives = 81/269 (30%), Gaps = 26/269 (9%)

Query: 4   VTVATWNV-----N-----SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + V ++N+     N     S  AR       I+E  P +I +QE +     +  E  +  
Sbjct: 49  IKVMSFNIRYYNTNDTGDKSWDARTAAFIPMIEEQKPTVIGMQEARPPQLKWLEENWKDY 108

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
            Y  +     + N    +  +   + V  +  D   +              T+       
Sbjct: 109 GYIGKGRRANNANNDEFVPIFYRKKAVELVKWDCFWLSETPDVPGSQGWDNTV-PRVATW 167

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
                I S K    I+         +    +E  +    + N    P         + D+
Sbjct: 168 AIFKHIASGKKFFFINTHIDVGSTIAPGKSMEVIVNKMSELNPEGLPMLLTADFNKQIDS 227

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
                V+     +             D+ + Y+ +   A+ +       +DHI  +    
Sbjct: 228 DIFNGVKTFMTNV------RLSAPVTDSKYSYTGFGT-ANPYI------VDHIFCTG--F 272

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
             L    ID   +  T  SDH P++  L+
Sbjct: 273 KALKFETIDKVYQNITYISDHYPIVGKLE 301


>gi|222637558|gb|EEE67690.1| hypothetical protein OsJ_25350 [Oryza sativa Japonica Group]
          Length = 486

 Score = 46.7 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 39/307 (12%), Positives = 86/307 (28%), Gaps = 53/307 (17%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDK---NFPFETLQSLNY-HIETCGQKSYNGVAILS 72
           R  ++   ++E   DII LQ  + E++   +   E  + L   ++         G A+LS
Sbjct: 172 RRRSVEEVLREVGADIIGLQNVRAEEERGMSPLSELAEGLGMRYVFAESWAPEYGNAVLS 231

Query: 73  KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIK 132
           ++    I         D           +  +  R+ + +    N         K     
Sbjct: 232 RWP---IKRWKSQRVADQSDFRCSKVRYVRAKNFRVESKHGLILNVDNHLSDRSKKCLYF 288

Query: 133 RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL------ 186
                    +E+        +++     H   +  + + +A                   
Sbjct: 289 EMKNVLRATIEVPRAGEV--NFHCTHLDHLDESWRMKQMNAILRSSDGPHILTGGLNALD 346

Query: 187 ---QNMGFTDAIRATHDTHHLYS-------------FWDYYADSWSK------------- 217
               +      I   ++     +             + D  A  ++              
Sbjct: 347 GTDYSDERWADIVKYYEEIGKPTPKAEVMKYLKGKQYVD--AKDFAGECEAVVVVAKGQD 404

Query: 218 -----NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQD 272
                  G R+D+I+ SP +                   SDH  V V + I + ++  ++
Sbjct: 405 VQGTCKYGTRVDYILASPNSPYKFVPGS--YTVISSKGTSDHHIVKVDVTIQDKKETDEE 462

Query: 273 STSQNMK 279
           S +Q  +
Sbjct: 463 SGNQRQR 469


>gi|55822181|ref|YP_140622.1| hypothetical protein str0193 [Streptococcus thermophilus CNRZ1066]
 gi|55738166|gb|AAV61807.1| conserved hypothetical protein [Streptococcus thermophilus
           CNRZ1066]
          Length = 290

 Score = 46.7 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/269 (10%), Positives = 69/269 (25%), Gaps = 20/269 (7%)

Query: 2   SVVTVATWNVNS-IRARIHNLAAWIKEN----NPDIICLQETKTEDKNFPFETLQ-SLNY 55
            ++   T N +S I          +KE       DIIC QE    ++      ++    Y
Sbjct: 19  KIMKFLTLNTHSWIEEDAEGKFQTLKEQILKAQYDIICFQEV---NQEIETAAVETDAYY 75

Query: 56  HIETCGQKSYNGVAIL---------SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
           H+       +    +                    +  G D   +   + +   +    +
Sbjct: 76  HVLPSATSIHQDHFVRLLVEKLAEEGLQYHWTWAYNHIGYDHLNEGVAVLSRQPLTASEI 135

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
            + ++  P           +     +     +      ++                    
Sbjct: 136 LVSDVDDPTDYHTRRVAVAETTVDGREVAVASIHLSWWDKGFQEEWARIEERFQSIGKPL 195

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226
           I+  +                 +   D+ +    T+  Y+            + +RID++
Sbjct: 196 ILAGDFNNPAGREGYQTILASPLKLQDSFQVAQKTNGSYTVGPGIDGWKGNEEPLRIDYV 255

Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHT 255
             S E    ++   +       +  SDH 
Sbjct: 256 FASQEWA--VNRLSVIFDGNNQSLVSDHY 282


>gi|28897872|ref|NP_797477.1| putative phospholipase C [Vibrio parahaemolyticus RIMD 2210633]
 gi|260361802|ref|ZP_05774827.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus
           K5030]
 gi|260877031|ref|ZP_05889386.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus
           AN-5034]
 gi|28806085|dbj|BAC59361.1| putative phospholipase C precursor [Vibrio parahaemolyticus RIMD
           2210633]
 gi|308093920|gb|EFO43615.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus
           AN-5034]
 gi|308113224|gb|EFO50764.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus
           K5030]
          Length = 442

 Score = 46.7 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 40/283 (14%), Positives = 80/283 (28%), Gaps = 43/283 (15%)

Query: 4   VTVATWNVNSIRA-------RIHNLAAWIKENNPDIICLQETKTE-DKNFPFETLQSLNY 55
           + + T+N+ ++ A       R   +  ++K    D++  QE        F  E  +   Y
Sbjct: 178 LKLMTYNIWALPAIASHIGDRYELIPDYVK--GYDVLAFQEVFASGRDAFLRELAKEYPY 235

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
             +   +  +N             + +         +               I      H
Sbjct: 236 QTKMLDKDGFNVYDGGVIIVSRYPIVNEAQYVFPDCSGTDCFADKGVNYAEIIKGGQAYH 295

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
                +  +D   +   R  +F   R         A   NI       Y+     N    
Sbjct: 296 VFATHTASFDTDTAREYRQRQFQQMR-------TMAQSLNIPNNETVVYSGDFNVNK--- 345

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYS--FWDYYADSWS-------KNKGIRIDHI 226
                              + A    +  Y+   +D   ++++       +N    +D++
Sbjct: 346 ------LKFPGDYQQMIANLSAMEPQYSGYTASTFDPRINNFAGEALSGGENVEY-LDYV 398

Query: 227 MLSPEA-TSLLHSARID---TKPRGWTKP---SDHTPVIVSLD 262
           M+S E      +  R+D   +   G  K    SDH PV   + 
Sbjct: 399 MVSNEYGVKSFNDNRVDVPRSTAEGLWKHYNLSDHFPVSAVIK 441


>gi|311262545|ref|XP_003129235.1| PREDICTED: nocturnin-like [Sus scrofa]
          Length = 427

 Score = 46.7 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/256 (14%), Positives = 64/256 (25%), Gaps = 28/256 (10%)

Query: 21  LAAWIKENNPDIICLQETKTEDKNFP--FETLQSLNYHIETCGQKSYNGVAILSKYQPIE 78
           +   I    PDI+CLQE    D  F      L  L Y      +         S    +E
Sbjct: 179 ILEEILAYQPDILCLQEV---DHYFDTFHPLLSRLGYQGTFFPKP-------WSPCLDVE 228

Query: 79  IVTHLPGD--DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
                 G           +  +  I    + +    +     +       +       L+
Sbjct: 229 HNNGPDGCALFFLQNRFKLVNSANIRLTAMTLKTNQVAIAQTLECRASRRQFCIAVTHLK 288

Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV----RQSFQKLQNMGFT 192
             +               N+         P+I   D             +   L      
Sbjct: 289 ARTGWERFRSAQGCDLLQNLQNITQGAKIPLIICGDFNAEPTEEVYKHFASSSLNLSSAY 348

Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS------PEATSLLHSARIDTKPR 246
             + A   +   Y+ W        ++    +D+I  S        A  LL   +I     
Sbjct: 349 KLLSADGQSEPPYTTWKIRTSGECRHT---LDYIWYSRQALSVRSALDLLTEEQIGPNRL 405

Query: 247 -GWTKPSDHTPVIVSL 261
             +  PSDH  ++   
Sbjct: 406 PSFNYPSDHLSLVCDF 421


>gi|307705238|ref|ZP_07642105.1| endonuclease/Exonuclease/phosphatase family protein [Streptococcus
           mitis SK597]
 gi|307621187|gb|EFO00257.1| endonuclease/Exonuclease/phosphatase family protein [Streptococcus
           mitis SK597]
          Length = 271

 Score = 46.7 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/273 (12%), Positives = 78/273 (28%), Gaps = 16/273 (5%)

Query: 4   VTVATWNVNSI--RARIHNL---AAWIKENNPDIICLQETK-------TEDKNFPFETLQ 51
           +   T N +S   +            I E + D+IC QE          E  +       
Sbjct: 1   MKFLTLNTHSWMEKEAEEKFQILLEDILEKDYDLICFQEINQEITSPEVEVNDLYKSLPA 60

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
           +   H +   +     ++   K        +  G D   +   I +   I  + + + ++
Sbjct: 61  AEPIHQDHYVRLLVEKLSEQGKNYYWTWAYNHIGYDRYHEGVAILSKTPIEAREILVSDV 120

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG-DYNIIPQPHDCYNPIIWE 170
             P           +     K     +      ++        +  + +  +    +  +
Sbjct: 121 DDPTDYHTRRVALAETAVDGKELAVASVHLSWWDKGFQEEWARFEAVLKELNKPLLLAGD 180

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230
            +     E  Q+      +G  DA     +    Y+            + +RID++  + 
Sbjct: 181 FNNPAGQEGYQAILASP-LGLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTTK 239

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           E    + +  +        + SDH  +   L+ 
Sbjct: 240 ELA--VENLHVVFDGNKSPQVSDHYGLNAILNW 270


>gi|126179386|ref|YP_001047351.1| endonuclease/exonuclease/phosphatase [Methanoculleus marisnigri
          JR1]
 gi|125862180|gb|ABN57369.1| Endonuclease/exonuclease/phosphatase [Methanoculleus marisnigri
          JR1]
          Length = 328

 Score = 46.7 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 26/57 (45%), Gaps = 9/57 (15%)

Query: 4  VTVATWNVN----SIRARIHNLAAWIKENNPDIICLQETKTEDKNFP--FETLQSLN 54
          + + +WN++     +++    + A    ++PDI+  QE    D+  P   E L+   
Sbjct: 7  MRLISWNIDLFRSGLKSVEKKVEAVC-RHSPDIVAFQEV--TDRALPLFREELEKFG 60



 Score = 45.2 bits (105), Expect = 0.012,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 21/66 (31%), Gaps = 6/66 (9%)

Query: 198 THDTHHLYSFWDYYAD-SWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTP 256
                  YS+          K K  R DHI  S        +       RG    SDH+ 
Sbjct: 267 HGYQAREYSWCPDRGPEDVPKCK--RYDHIFASTRLNP--TACWYLHDLRG-QGLSDHSA 321

Query: 257 VIVSLD 262
           V++  +
Sbjct: 322 VVMDFE 327


>gi|326664792|ref|XP_003197888.1| PREDICTED: transposon TX1 uncharacterized 149 kDa protein-like
           [Danio rerio]
          Length = 1140

 Score = 46.7 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 81/265 (30%), Gaps = 35/265 (13%)

Query: 4   VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           +T +T NV S+++  R  ++ + +K    D+  LQE        PF      NY      
Sbjct: 3   ITFSTINVRSVKSLVRAQSIFSLLKTFKTDVFLLQEC-----ALPFLK----NYKKWEDL 53

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
                 +   S +   +    +     +       +T   + + +      L     + +
Sbjct: 54  WTPGPSIWSGSNFNKND---GVAILINNPNILVKGSTVVRDGRAILANLTVLDRDFNVLN 110

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
                  +     L      +    P I AGD+N +    D        +D         
Sbjct: 111 FYGFTDKNKRFELLEDIQPHMLGRVPFILAGDFNCVLTQKDRRRA----DDFKVDKTSVL 166

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS--PEATSLLHSA 239
               +++    D  +A H     ++++          +  RID++     P   + L   
Sbjct: 167 LQGLVRDFKLVDCFKAMHQREEGFTWFSGDGT-----RASRIDYMFTRDYPPTDAKLT-- 219

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIP 264
                       SDH  +  +L +P
Sbjct: 220 --------PLFFSDHLMLSCTLSLP 236


>gi|325189143|emb|CCA23668.1| conserved hypothetical protein [Albugo laibachii Nc14]
 gi|325190841|emb|CCA25329.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 423

 Score = 46.7 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 46/273 (16%), Positives = 79/273 (28%), Gaps = 37/273 (13%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQP 76
           R  ++   I E  P I+              E L+       +        +    K   
Sbjct: 152 RKAHVLDIINEYKPTILG-----------TREGLE-------SQLVDIATNLTDSYKRFG 193

Query: 77  IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
           IE          +    F    +  N   L    +++      T   ++ +   + +  +
Sbjct: 194 IERDQGSNFWLSENPLDFGTIGWNANCVRLVTWCIFILFETQQTFYVFNTQFDQVGKVSQ 253

Query: 137 FASQRLELEEPLIFAGD--YNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDA 194
           + S RL        AG           + Y             E  +      N      
Sbjct: 254 YQSARLLWHRIESIAGTNAIVFTLGDFNVYRDDAIYTYLTKYEEGPKFHDAWANAASK-- 311

Query: 195 IRATHDTHHLYSFWDYYADSW----SKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWT 249
                D    Y++  +   ++     K +G+  ID I+  P     +   ++ T+ R   
Sbjct: 312 -----DGGVSYTYHAWQGPAYHLEKDKVEGLYHIDWILSRPYV--KVLETKVITECRNGL 364

Query: 250 KPSDHTPVIVSLDIPE---PRKKQQDSTSQNMK 279
            PSDH PV   L +P     R  Q DST    K
Sbjct: 365 YPSDHYPVQTKLVLPASTVKRSSQSDSTGSEKK 397


>gi|323705197|ref|ZP_08116773.1| Endonuclease/exonuclease/phosphatase [Thermoanaerobacterium
           xylanolyticum LX-11]
 gi|323535623|gb|EGB25398.1| Endonuclease/exonuclease/phosphatase [Thermoanaerobacterium
           xylanolyticum LX-11]
          Length = 231

 Score = 46.7 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 80/265 (30%), Gaps = 45/265 (16%)

Query: 3   VVTVATWNVNS---I--RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57
           ++ V T+N++    I     ++ ++  I+E   DI+ LQE          +     +Y +
Sbjct: 2   IIKVMTYNIHGGKDIEGNLTLYGISNLIREIGVDIVGLQEV---------DVFLKRSYFL 52

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
                 +       +    + I     G+   + +R+       +    +     +    
Sbjct: 53  NEIKYLAKRLKMHYAFGPNLRIGFGSFGNG--ILSRYPIVKKKNHHIYSKGERRGVLTAL 110

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
              +             L    + ++ +E L    +          +N    E      +
Sbjct: 111 IQLNENKKIWFLTTHLGLNRKERLVQSQEILKIVSNLEYPVIMTGDFNETPGEEAYSTII 170

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
            V +     QN  F   +    +                     RID+IM S      + 
Sbjct: 171 RVLKDAVNTQNSAFHTYVDGCENV--------------------RIDYIMHSKGM--RVE 208

Query: 238 SAR-IDTKPRGWTKPSDHTPVIVSL 261
           S + ID+        SDH PV+ SL
Sbjct: 209 SIKAIDS------TLSDHLPVVASL 227


>gi|315612842|ref|ZP_07887753.1| RgfB protein [Streptococcus sanguinis ATCC 49296]
 gi|315314952|gb|EFU62993.1| RgfB protein [Streptococcus sanguinis ATCC 49296]
          Length = 271

 Score = 46.7 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/267 (12%), Positives = 81/267 (30%), Gaps = 20/267 (7%)

Query: 4   VTVATWNVNSI--RARIHNLAAWIKEN---NPDIICLQETKTEDKNFPFETLQSLNY--- 55
           +   T N +S   +         +++    + D+IC QE     +    E   + +Y   
Sbjct: 1   MKFLTLNTHSWMEKEAEEKFQILLQDILDKDYDLICFQEI--NQEMTSPEVEANNHYQAL 58

Query: 56  ------HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
                 H +   +     +A   K        +  G D   +   I +   I  + + + 
Sbjct: 59  PSAEPIHQDHYVRLLVEKLAEKGKNYYWTWAYNHIGYDRYHEGVAILSKTPIKAREILVS 118

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG-DYNIIPQPHDCYNPII 168
           ++  P           +     K     +      ++        + ++ +  +    + 
Sbjct: 119 DVDDPTDYHTRRVALAETEVEGKELALASVHLSWWDKGFQEEWARFEVVLKDLNKPLILA 178

Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
            + +     E  Q+      +G  DA     +    Y+            + +RID++  
Sbjct: 179 GDFNNPAGQEGYQAIL-ASQLGLQDAFEVAKERSGSYTVPPEIDGWKGNTEPLRIDYVFT 237

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHT 255
           + E    + S ++    +   + SDH 
Sbjct: 238 TKELE--VESLQVVFDGQNSPQVSDHY 262


>gi|308463548|ref|XP_003094047.1| hypothetical protein CRE_17519 [Caenorhabditis remanei]
 gi|308248613|gb|EFO92565.1| hypothetical protein CRE_17519 [Caenorhabditis remanei]
          Length = 968

 Score = 46.7 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 43/280 (15%), Positives = 89/280 (31%), Gaps = 25/280 (8%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENN---PDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           + + T+N  S+ A  + LA  ++E N    DII L ETK   +                 
Sbjct: 21  LRICTFNCRSV-ATDNRLAELLEETNRIKYDIIGLSETKRSAE-VHMTNRDGTG---VIL 75

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           G+++ + V+    +   + +     +   V  R    T  +N     I   Y P  +   
Sbjct: 76  GKRNDSSVSGGVGFIINKSLMPKIKEIKIVNHRIGYLTLQVNKNQYTIIQGYAPTADYEE 135

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
               +   +    +    S+   +              +     + +   ND+   L   
Sbjct: 136 EDHSNFYENLEDVYKSCKSRYKMVIGDFNARIGERKGNEVFIGPHSMENRNDSGERL--- 192

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            +     N  F    +    TH  +++         +     +DHI+ +      +    
Sbjct: 193 -ATFCEVNRVFHMNSQFIKPTHRRWTYISPDKQHRHE-----LDHILANG---KYITDVS 243

Query: 241 IDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
           +      +T  SDH  +  ++ I   + K +    +  KP
Sbjct: 244 V---VPSFTNGSDHRMLRANVHINAKQAKFEQV--KRRKP 278


>gi|281354416|gb|EFB30000.1| hypothetical protein PANDA_019779 [Ailuropoda melanoleuca]
          Length = 128

 Score = 46.7 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 38/110 (34%), Gaps = 12/110 (10%)

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
                 E       L  +  TD  RA H     Y+F+     ++S     RIDHI+    
Sbjct: 16  KQTINKETMALNDSLDWINLTDLFRAFHPKAAEYTFFSSIHGTFS-----RIDHILGHKS 70

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
           A +      I          SDH    + L++   +   + S +  +K I
Sbjct: 71  ALNKYKKTEIIACI-----FSDHN--TMKLEVNSRKNCGKTSNTWKLKNI 113


>gi|254506370|ref|ZP_05118513.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus 16]
 gi|219550850|gb|EED27832.1| endonuclease/exonuclease/phosphatase [Vibrio parahaemolyticus 16]
          Length = 442

 Score = 46.7 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 39/283 (13%), Positives = 80/283 (28%), Gaps = 43/283 (15%)

Query: 4   VTVATWNVNSIRA-------RIHNLAAWIKENNPDIICLQETKTE-DKNFPFETLQSLNY 55
           + + T+N+ ++ A       R   +  ++K    D++ LQE        F  E  +   Y
Sbjct: 178 LKLMTYNIWALPAIASHIGDRYELIPDYVK--GYDVLALQEVFASGRDAFLRELAKEYPY 235

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
             +   +  +N             + +         +               I      H
Sbjct: 236 QTKMLDKDGFNIHDGGVVIVSRYPIVNQAQYVFPDCSGTDCFADKGVNYAEIIKGGQAYH 295

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
                +  +D   +   R         + ++    A   NI       Y+     N    
Sbjct: 296 VFATHTASFDTDTAREYRQ-------RQFKQMRAMAKSLNIPNGETVVYSGDFNVNK--- 345

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYS--FWDYYADSWS-------KNKGIRIDHI 226
                              + A    +  Y+   +D   ++++       +N    +D++
Sbjct: 346 ------LKFPGDYQQMIANLSAIEPRYSGYTASTFDPRINNFAGEALSGGENVEY-LDYV 398

Query: 227 MLSPEA-TSLLHSARID----TKPRGWTK--PSDHTPVIVSLD 262
           M+S E      +  R+D    T    W     SDH PV   + 
Sbjct: 399 MVSNEYGVKSFNDNRVDVPRSTAESLWKHYNLSDHFPVSAVIK 441


>gi|163741385|ref|ZP_02148776.1| endonuclease/exonuclease/phosphatase family protein [Phaeobacter
           gallaeciensis 2.10]
 gi|161385119|gb|EDQ09497.1| endonuclease/exonuclease/phosphatase family protein [Phaeobacter
           gallaeciensis 2.10]
          Length = 241

 Score = 46.7 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/267 (12%), Positives = 65/267 (24%), Gaps = 52/267 (19%)

Query: 4   VTVATWNVN---SI--RARIHNLAAWIKENNPDIICLQET--KTED--KNFPFETLQSLN 54
           + +A++N+     +  R R       I+    D++ LQE   +        P   L    
Sbjct: 12  LRLASYNIQKSVGLDLRRRPRRTLQVIEGTGADLVLLQEADKRLPPRPAALPHFILDEAG 71

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           + I         G A    +    ++    G +L                   +    L 
Sbjct: 72  WQIV------DLGGAGSLGWHGNAVIWRGDGIELQDHGHIPLPGLEPRGAVWALFQTGLG 125

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
               + +                 + +   E+    A      P     +       D  
Sbjct: 126 PLRVVGAH-------------LGLTTKARHEQVHHLAEVIAREPALPTVWAGDFN--DWS 170

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
               +     +L+ +    +  A                         +D I +S     
Sbjct: 171 RQPVLDHLAPELRFVPPRPSFPALRPMGA-------------------LDRIAVSAGLE- 210

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261
            +  + +    R     SDH PV   L
Sbjct: 211 -VVDSGVYR-ARPAHIASDHLPVWADL 235


>gi|154274436|ref|XP_001538069.1| predicted protein [Ajellomyces capsulatus NAm1]
 gi|150414509|gb|EDN09871.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 1553

 Score = 46.7 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 28/75 (37%), Gaps = 8/75 (10%)

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           + W           G  ID   LSP     L    I  +     K SDH P+  +L++  
Sbjct: 768 TTWQDRGSP-----GTTIDLTFLSPLLHDKLRRCAIAEEA---CKGSDHKPMETTLELTP 819

Query: 266 PRKKQQDSTSQNMKP 280
             K+ +    +N +P
Sbjct: 820 IPKEAERRNWKNAEP 834


>gi|90420840|ref|ZP_01228745.1| possible endonuclease/exonuclease [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90334815|gb|EAS48587.1| possible endonuclease/exonuclease [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 347

 Score = 46.7 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 69/240 (28%), Gaps = 47/240 (19%)

Query: 25  IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLP 84
           I    PDI+ LQET   D     ETL +   H   C      G   +   +P    T   
Sbjct: 138 IAAEAPDIVTLQET-GRDWQARLETLSATYPHQFYCSGPFAQGNVAILSKRPFVDETGYC 196

Query: 85  GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL 144
             +    AR I+   T+ T   +      P G+        + +  ++            
Sbjct: 197 DVENGFAARRIDFNGTVATIVSQHLQWPWPFGHWRQLADLQETLGLLR------------ 244

Query: 145 EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL 204
             P++ AGD+N  P                                          T   
Sbjct: 245 -GPVLIAGDFNAAPWSAALETYAAASGTTPV-------------------------TGIG 278

Query: 205 YSFWDY-YADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +++       + +   G+ IDH++ +P          I          SDH P+  +  +
Sbjct: 279 FTWLSRALPGALAPYIGLPIDHVLATPGIV-------IRKLGTLAPTASDHMPIAATFSL 331


>gi|323334754|gb|EGA76127.1| Apn2p [Saccharomyces cerevisiae AWRI796]
          Length = 330

 Score = 46.7 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 39/138 (28%), Gaps = 17/138 (12%)

Query: 2   SVVTVATWNVNSIRA------------RIHNLAAWIKENNPDIICLQETKTEDKNFPFET 49
           + +   T+NVN IR              + ++  + +    DII  QE KTE  +     
Sbjct: 9   NTIRFLTFNVNGIRTFFHYQPFSQMNQSLRSVFDFFR---ADIITFQELKTEKLSISKWG 65

Query: 50  LQSLNYHIETCGQKS--YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107
                Y   +  Q    Y+GV    +        +     +  +          N +   
Sbjct: 66  RVDGFYSFISIPQNRKGYSGVGCWIRIPEKNHPLYHALQVVKAEEGITGYLTIKNGKHSA 125

Query: 108 IGNLYLPHGNPITSTKYD 125
           I      +         D
Sbjct: 126 ISYRNDVNQGIGGYDSLD 143


>gi|164687368|ref|ZP_02211396.1| hypothetical protein CLOBAR_01009 [Clostridium bartlettii DSM
          16795]
 gi|164603792|gb|EDQ97257.1| hypothetical protein CLOBAR_01009 [Clostridium bartlettii DSM
          16795]
          Length = 215

 Score = 46.7 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 11/43 (25%)

Query: 4  VTVATWNV--------NSIRARIHNLAAWIKENNPDIICLQET 38
          + + ++N+        N  R  +  +A ++K  N DIICLQE 
Sbjct: 1  MKIISYNIHTGTDKDKN--RT-LRQMAKYLKIQNCDIICLQEV 40



 Score = 44.4 bits (103), Expect = 0.017,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 10/47 (21%)

Query: 215 WSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           ++KN   RID+  +S   T    S  +D         SDH PVIV  
Sbjct: 177 FAKN---RIDYCFISENLT--AKSYTVDEVYM-----SDHFPVIVEF 213


>gi|150003207|ref|YP_001297951.1| putative endonuclease/exonuclease/phosphatase family protein
           [Bacteroides vulgatus ATCC 8482]
 gi|254882487|ref|ZP_05255197.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|294776025|ref|ZP_06741521.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           vulgatus PC510]
 gi|319640411|ref|ZP_07995133.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. 3_1_40A]
 gi|149931631|gb|ABR38329.1| putative endonuclease/exonuclease/phosphatase family protein
           [Bacteroides vulgatus ATCC 8482]
 gi|254835280|gb|EET15589.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|294450163|gb|EFG18667.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           vulgatus PC510]
 gi|317387898|gb|EFV68755.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. 3_1_40A]
          Length = 281

 Score = 46.7 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 39/268 (14%), Positives = 82/268 (30%), Gaps = 27/268 (10%)

Query: 7   ATWNV------NSIRA---RIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYH 56
           AT+N+      +S+     R   +  +IK++  DI+ +QE    + ++      +     
Sbjct: 28  ATFNIRYDNPQDSLNNWQYRKDRVCQFIKDHELDIVGMQEVLHNQFQDLRAGLPEYDGIG 87

Query: 57  IETCGQKSYNGVA-ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
           +     K+    A +  +    E++        +         +      +     +   
Sbjct: 88  VGRDDGKTAGEYAPLFYRKDKYEVLDSNTFWLAENPDSVGMMGWDAVCVRIATWAKFKDK 147

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
                    +     +    R  S  L + +     G+                  DA  
Sbjct: 148 ATGKIFMAVNTHFDHVGEEARRQSALLIIRKIKEIVGER------PAVVTGDFNVTDASD 201

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDY-YADSWSKNKGIRIDHIMLSPEATS 234
             E   + + +    +  A R    T   Y+F D+    +    K   ID I ++P+   
Sbjct: 202 AYETITTNEFVMKDAYKTAARV---TGVDYTFHDFARIPAEDCEK---IDFIFVTPQVL- 254

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
            + S  I  +       SDH P +  L+
Sbjct: 255 -VKSCEIPAEV-PEALLSDHNPQLADLE 280


>gi|110800029|ref|YP_694880.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens ATCC 13124]
 gi|110674676|gb|ABG83663.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens ATCC 13124]
          Length = 263

 Score = 46.7 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 38/269 (14%), Positives = 77/269 (28%), Gaps = 20/269 (7%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQE----TKTEDKNFPFETLQSLN 54
           + + T N +S        +I  LA  I E   D+I LQE     K          L+  N
Sbjct: 1   MKLLTLNCHSWLEEEQLYKIKYLAKTIVEEKYDVIALQEASQSIKAS---IKEGNLKEDN 57

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           Y +    + +        KY  +   +H+  D  +     +     +N+++  I   +  
Sbjct: 58  YGLVLIEEINK---LGGEKYHLVWDYSHIGYDIYEEGLCILTKHKIVNSESFYISKSHCK 114

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
                            +    ++       +              H   +         
Sbjct: 115 TFWRSRKIVKATIDIKNENIDFYSCHMGWWHDKEESFTFQVENLLAHAKESKNRAFFMGD 174

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD--SWSKNKG-IRIDHIMLSPE 231
           F        +    +     I   +   +  S      +   W  N G +RID I  +  
Sbjct: 175 FNNNAFLKNEGYDFLKSNGLIDTYNLAENKDSGVTVNKNIAGWEDNTGELRIDIIFTNRN 234

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
             + ++ +R+    +     SDH  + + 
Sbjct: 235 --TKVYDSRVIFNGKNKEVVSDHFGLEIE 261


>gi|302875724|ref|YP_003844357.1| Endonuclease/exonuclease/phosphatase [Clostridium cellulovorans
           743B]
 gi|307689155|ref|ZP_07631601.1| Endonuclease/exonuclease/phosphatase [Clostridium cellulovorans
           743B]
 gi|302578581|gb|ADL52593.1| Endonuclease/exonuclease/phosphatase [Clostridium cellulovorans
           743B]
          Length = 263

 Score = 46.7 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 40/272 (14%), Positives = 81/272 (29%), Gaps = 21/272 (7%)

Query: 4   VTVATWNVNSIRAR--------IHNLAAWIKENNPDIICLQET---KTEDKNFPFETLQS 52
           +   T N +   A         I NLA  IK+N  D+I LQE    K  ++ F  + ++ 
Sbjct: 1   MRFLTLNCH---AWHEENQLEKIKNLARVIKKNAYDVITLQEVSQSKDSEQMF--KDIKK 55

Query: 53  LNYHIETCGQKSYNGV-AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
            NY      +    GV      ++   I +    +   +  +        +  ++     
Sbjct: 56  DNYVFLLVEELGKLGVYDYSFFWEYNHISSGKYEEGTAILTKHPVGKIETSFLSISEDYS 115

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
                  + +                       E     A       + ++    +   N
Sbjct: 116 NWKTRKSVKNIIEYKNKEIAIFCCHLGFWDDSEEPFKQQADRLLEQVKENELTFLMGDFN 175

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
                L+    +  L + G  D      +     +     A     ++  RID I+ +  
Sbjct: 176 S--DALKRNTGYDYLMSKGLYDTYNMAKEKDLGITVSGKIAGWEKNDEQKRIDLILTNTP 233

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
               +  +R+       +  SDH  + V ++I
Sbjct: 234 VE--VKYSRVIFNGENESIVSDHYGLEVEIEI 263


>gi|163734662|ref|ZP_02142101.1| hypothetical protein RLO149_14583 [Roseobacter litoralis Och 149]
 gi|161392155|gb|EDQ16485.1| hypothetical protein RLO149_14583 [Roseobacter litoralis Och 149]
          Length = 227

 Score = 46.7 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 10/62 (16%)

Query: 4  VTVATWNVN---SI--RARIHNLAAWIKENNPDIICLQE----TKTEDKNFPFETLQ-SL 53
          + +A++N+     +  R     +A  + E + D++ LQE    T T     P E L+  L
Sbjct: 1  MKIASYNIRKAVGLDWRRDPERVADVLLEIDADVVVLQEADRRTGTRAGVLPIERLESEL 60

Query: 54 NY 55
           Y
Sbjct: 61 GY 62



 Score = 37.5 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 21/46 (45%), Gaps = 3/46 (6%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268
           +D  +L P     + S+ +        + SDH P+++++D  +   
Sbjct: 185 LDLFVLGPGL--RVVSSHVHKSTLA-VRASDHLPIVITVDFTKAEP 227


>gi|149010614|ref|ZP_01831985.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae SP19-BS75]
 gi|147765095|gb|EDK72024.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae SP19-BS75]
          Length = 271

 Score = 46.7 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/264 (10%), Positives = 69/264 (26%), Gaps = 14/264 (5%)

Query: 4   VTVATWNVNSI--RARIHNL---AAWIKENNPDIICLQETK-------TEDKNFPFETLQ 51
           +   T N +S   +            I E + D+IC QE          E  +       
Sbjct: 1   MKFLTLNTHSWMEKEAEEKFQILLEDILEKDYDLICFQEINQEMTSSEVEVNDLYQALPA 60

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
           +   H +   +     +    K        +  G +   +   I +   I  + + + ++
Sbjct: 61  AEPIHQDHYVRLLVEKLLEQGKNYYWTWAYNHIGYNRYHEGVAILSKTPIEAREILVSDV 120

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
             P           + +   K     +      ++                    ++  +
Sbjct: 121 DDPTDYHTRRVALAETVVDGKELAVASVHLSWWDKGFQEEWARFEAVLKKLNKPLLLAGD 180

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
                 +          +G  DA     +    Y+            + +RID++  + E
Sbjct: 181 FNNPAGQEGYQAILASPLGLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTTKE 240

Query: 232 ATSLLHSARIDTKPRGWTKPSDHT 255
               + +  +        + SDH 
Sbjct: 241 LA--VENLHVVFDGNKSPQVSDHY 262


>gi|126730184|ref|ZP_01745996.1| Endonuclease/exonuclease/phosphatase [Sagittula stellata E-37]
 gi|126709564|gb|EBA08618.1| Endonuclease/exonuclease/phosphatase [Sagittula stellata E-37]
          Length = 239

 Score = 46.7 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 28/66 (42%), Gaps = 14/66 (21%)

Query: 2  SVVTVATWNVN---SI--RARIHNLAAWIKENNPDIICLQE------TKTEDKNFPFETL 50
            + VA++N+     +  R   H +   + E + D+I LQE      T+      P + L
Sbjct: 11 RSMRVASYNIRKAVGLDWRRDPHRVVDVLGEIDADVIALQEADRRIGTRA--GVLPLDRL 68

Query: 51 Q-SLNY 55
          +  L Y
Sbjct: 69 ETELGY 74



 Score = 37.1 bits (84), Expect = 3.1,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 3/39 (7%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           +D  +L P   S   SA +        + SDH PV+V +
Sbjct: 197 LDRFVLGPGLRS--VSAHVHHSALA-KRASDHLPVVVDI 232


>gi|3283068|gb|AAC72298.1| reverse transcriptase [Caenorhabditis elegans]
          Length = 1066

 Score = 46.7 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/254 (11%), Positives = 67/254 (26%), Gaps = 24/254 (9%)

Query: 5   TVATWNVNSIRARIHNLAAWIKEN---NPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
            V T+N  S+ +    LA  ++E      D+I L ETK   +      +      +    
Sbjct: 116 RVCTFNCRSL-SSDDRLAELLEETRRIQFDVIGLCETKRAAE---AHLIHHDGTGVFLGK 171

Query: 62  QKSYN-GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           +   +    +    +   +   +    L  +   +    +       I        + + 
Sbjct: 172 RNESSVSGGVGFIVRSTLLPKIVEVRFLSHRIGLLTFKVSRKFNCTVIQVYAPTADSDLE 231

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
                            +  +L + +     G      +    +      +         
Sbjct: 232 EICDFYDSVEDVFRECRSKYKLVIGDFNARMGCRQNNERYIGPHAMEPRNDTG-----EL 286

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            +     N  +          H  ++F     +   +     IDHI+ + +    +    
Sbjct: 287 LATFCETNRLWHTNSMFKKPMHKRWTFVSPDGNHRHE-----IDHILANGKF---VTDTT 338

Query: 241 IDTKPRGWTKPSDH 254
           +      +T  SDH
Sbjct: 339 VLP---SFTNGSDH 349


>gi|21326501|gb|AAM47629.1|AC122147_18 Putative non-LTR retroelement reverse transcriptase [Oryza sativa
           Japonica Group]
          Length = 1345

 Score = 46.7 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/259 (13%), Positives = 71/259 (27%), Gaps = 33/259 (12%)

Query: 6   VATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNF-PFETLQSLNYHI-ETCG 61
           +  WNV  + +  R  ++   +++ N  I+CLQETK         + L +L         
Sbjct: 389 ILNWNVRGLNSQVRKKSVKLLVEQMNATIVCLQETKMN--QISDVDVLHTLGSRFKNEFA 446

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
               +G          +    L        +     T   +     I  +Y P  +    
Sbjct: 447 FLPADGTRGGILLACNDNYFSLSNVLRKQYSLTATVTMKNDGIAWTITVVYGPQQDAQKI 506

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
               +     +  +       +       +   N         + +         LEV++
Sbjct: 507 EFITELQEIKQLVMSPWLLIGDFNLIYKTSDKNNSR----LNRSMMQRFKGTLDRLEVKE 562

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
                +   +T        +                     ID     P+   L  SA++
Sbjct: 563 LPLSGRKFTWTQECDNPTQSK--------------------IDRAFCCPDWDVLFDSAQM 602

Query: 242 DTKPRGWTKPSDHTPVIVS 260
                  +  SDH P+ ++
Sbjct: 603 YA---LSSSCSDHAPLFIT 618


>gi|76787484|ref|YP_330513.1| hypothetical protein SAK_1919 [Streptococcus agalactiae A909]
 gi|77405063|ref|ZP_00782163.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           agalactiae H36B]
 gi|76562541|gb|ABA45125.1| RgfB protein [Streptococcus agalactiae A909]
 gi|77176357|gb|EAO79126.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           agalactiae H36B]
          Length = 276

 Score = 46.7 bits (109), Expect = 0.003,   Method: Composition-based stats.
 Identities = 43/286 (15%), Positives = 82/286 (28%), Gaps = 38/286 (13%)

Query: 2   SVVTVATWN------VNSIRARIHNLAAW---IKENNPDIICLQETKTEDKNFPFETLQS 52
           S+    T N      VN     +  L      I     DIICLQE              S
Sbjct: 5   SMAKCLTLNTHSWMEVN----ALKKLFDLAEHIFREKYDIICLQEV--NQSISSPLAKSS 58

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
            NYH        +     L     +    +L G        +    ++   + + I +L 
Sbjct: 59  PNYHPIEGTPALHQDNFAL----QLVHYLNLQGLHYHWTWAYNHIGYSKYHEGVAILSLK 114

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
               N I  +  DD+  +  R    A   L  +   + +   ++                
Sbjct: 115 PLKPNDILVSAVDDETDYHTRRALVAETTLNDKVVTVVS--LHLSWFEKGFAEEWKRLET 172

Query: 173 ACFTLEVRQSFQKLQNMGF---------------TDAIRATHDTHHLYSFWDYYADSWSK 217
               +E         N                   D+ +  +     ++           
Sbjct: 173 TLLEVETPLLLMGDFNNPTGNQGYELVLNSPLALKDSHQIANHVFGDHTIMADIDGWEGN 232

Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            K +++DHI  S +    + S+++  +       SDH  + ++L++
Sbjct: 233 KKALKVDHIFTSEDL--SISSSQVVFEGGEAPVVSDHYGLEITLNL 276


>gi|168484835|ref|ZP_02709780.1| metal-dependent hydrolase [Streptococcus pneumoniae CDC1873-00]
 gi|172042000|gb|EDT50046.1| metal-dependent hydrolase [Streptococcus pneumoniae CDC1873-00]
          Length = 271

 Score = 46.7 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/264 (10%), Positives = 70/264 (26%), Gaps = 14/264 (5%)

Query: 4   VTVATWNVNSI--RARIHNL---AAWIKENNPDIICLQETK-------TEDKNFPFETLQ 51
           +   T N +S   +            I E + D+IC QE          E  +       
Sbjct: 1   MKFLTLNTHSWMEKEAEEKFQILLEDILEKDYDLICFQEINQEMTSSEVEVNDLYQALPA 60

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
           +   H +   +     ++   K        +  G +   +   I +   I  + + + ++
Sbjct: 61  AEPIHQDHYVRLLVEKLSEQGKNYYWTWAYNHIGYNRYHEGVAILSKTPIEAREILVSDV 120

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
             P           + +   K     +      ++                    ++  +
Sbjct: 121 DDPTDYHTRRVALAETVVDGKELAVASVHLSWWDKGFQEEWARFEAVLKKLNKPLLLAGD 180

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
                 +          +G  DA     +    Y+            + +RID++  + E
Sbjct: 181 FNNPAGQEGYQAILASPLGLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTTKE 240

Query: 232 ATSLLHSARIDTKPRGWTKPSDHT 255
               + +  +        + SDH 
Sbjct: 241 LA--VENLHVVFDGNKSPQVSDHY 262


>gi|150008485|ref|YP_001303228.1| hypothetical protein BDI_1871 [Parabacteroides distasonis ATCC
           8503]
 gi|149936909|gb|ABR43606.1| conserved hypothetical protein [Parabacteroides distasonis ATCC
           8503]
          Length = 304

 Score = 46.7 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 40/283 (14%), Positives = 92/283 (32%), Gaps = 35/283 (12%)

Query: 2   SVVTVATWNV--NSIRARIH--NLAAWIKENNPDIICLQETKTEDKN------FPFETLQ 51
           + V V+++N+  N++  ++     A  I+ +  DI+ +QE    +++       P E  +
Sbjct: 26  ATVKVSSFNIWLNTLGGKLPPSQTAKVIEASQTDIVGIQEGHIYEEDGIKHDHVP-EIAE 84

Query: 52  SLNYHIETCGQKSYN-------GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
           SL +H+   G+  Y                  I++         +    +I         
Sbjct: 85  SLGFHLFNQGEGHYILSRYPVVDSTASRYGVKIQVGKDKFCWMFNCHLYYIPYQPYQLNG 144

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
                  ++           + +   + R+ +   Q ++   P+   GD+N        +
Sbjct: 145 IPYGDYPFIDTEEEAVRFANEARREEVTRYQKDIQQVMKEGYPVFLTGDFNEP--SFLDW 202

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH---HLYSFWDYYADSWSKNKGI 221
                + D         + +    +G  D+ R  H        Y++    +    ++   
Sbjct: 203 TQRAADADIHKIKVEWPATKAFSEIGMNDSYRTIHPDEVSTPGYTWTPVPS---EQDILD 259

Query: 222 RIDHIMLSPEATSLLHSARI------DTKPRGWTKPSDHTPVI 258
           R+D ++ S      +  + I       +       PSDH  V 
Sbjct: 260 RLDFVLYSG---CKVTDSFITGESEATSDVVVSPYPSDHRMVT 299


>gi|114798114|ref|YP_760171.1| endonuclease/exonuclease/phosphatase family protein [Hyphomonas
           neptunium ATCC 15444]
 gi|114738288|gb|ABI76413.1| endonuclease/exonuclease/phosphatase family protein [Hyphomonas
           neptunium ATCC 15444]
          Length = 442

 Score = 46.7 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 40/278 (14%), Positives = 76/278 (27%), Gaps = 35/278 (12%)

Query: 4   VTVATWN------VNSI----R--ARIHNLAAWIKENNPDIICLQET-------KTEDKN 44
           + +A WN      V+      R  A +  +A +I   + DI  LQE        +     
Sbjct: 178 LRIAAWNTEHLTAVSGAGCFPRDEAALDLIADYITRVDADIWLLQEVDGDGALARVFGDG 237

Query: 45  FPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
           + F   Q          +   +G  + ++   I +   +  D L   A            
Sbjct: 238 WTFHVEQRAGGETYPLCRGRDDGTRLRAQNTAIAVRDGITHDRLPDLAALDLTGEGRTRY 297

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
            + I  L  P    I S             +R  +   + +    +    +   +     
Sbjct: 298 GVAI-TLPGPVPTDIMSVHLTSGCFSGDTSVRCPALFDQADVLEAWIDQRSAAGRAVIVG 356

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRID 224
                  +A                               Y  +              ID
Sbjct: 357 GDFNRRLEAEDDPVWTGLNDGTPAGLHIAGAGTGPSCDPRYREF--------------ID 402

Query: 225 HIMLSP-EATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
            ++LS    T ++  +  +T      +PSDH P+ +S+
Sbjct: 403 FLLLSDTALTRMVAGSFRETTYDTPARPSDHCPISLSI 440


>gi|296122827|ref|YP_003630605.1| endonuclease/exonuclease/phosphatase [Planctomyces limnophilus DSM
           3776]
 gi|296015167|gb|ADG68406.1| Endonuclease/exonuclease/phosphatase [Planctomyces limnophilus DSM
           3776]
          Length = 321

 Score = 46.7 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 40/291 (13%), Positives = 86/291 (29%), Gaps = 39/291 (13%)

Query: 3   VVTVATWNV-----NSIRARIHNLAAWIKENNPDIICLQETK--TEDKNFPFETLQSLNY 55
           VV V ++N+        +  +   A  I+E   D++ LQET+          +  + +  
Sbjct: 35  VVRVMSYNLWHGGDAG-KQPLEQTAKVIREARADLVGLQETRGYATGGQPRPDRAKEIAQ 93

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
            +         G AILS+Y   +      G +++  +        +      +  +    
Sbjct: 94  ILGWNYFDQGGGTAILSRYPIGKASPGKWGVEIEHPSG-----TKLYLFNAHLMYIPYQP 148

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII------------PQPHDC 163
              +     D      ++     +++   E+      D                      
Sbjct: 149 YQLLNIPYGDYPFIKTEQEAIDFAKKARGEQVERLIADIKATVPADATVFVTGDFNEPSH 208

Query: 164 YNPIIWENDACFTLEVRQSF--QKLQNMGFTDAIRATHDTH---HLYSFWDYYADSWSKN 218
           ++       A       +      +   GF D  R  H         ++      +  K+
Sbjct: 209 WDWTAAAQKAGRCPIAVKWPSTSMMAETGFIDTYREAHPDPVTAPGITWTPLTKITDPKD 268

Query: 219 KGIRIDHIMLSPEATSLLHSARID------TKPRGWTKPSDHTPVI--VSL 261
           +  RID +++       + S+++               PSDH  V+  V L
Sbjct: 269 RHDRIDFVLMRQG-GGKVLSSQVLGESKEAADVVVIPYPSDHRSVVSAVEL 318


>gi|308273030|emb|CBX29634.1| hypothetical protein N47_J06150 [uncultured Desulfobacterium sp.]
          Length = 273

 Score = 46.7 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 36/239 (15%), Positives = 66/239 (27%), Gaps = 27/239 (11%)

Query: 31  DIICLQETKTEDKNFPF--ETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDL 88
           D    QE    D    F  + L   NY                + +Q   I  +     +
Sbjct: 58  DFYAFQE--ANDFQIDFLSDLLPDYNY--------IGRRQPAPAYWQHNIIFYNKSWKCV 107

Query: 89  DVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQR-LELEEP 147
                ++ +T                              + ++  +   +      +  
Sbjct: 108 YCNHFYLSSTPN--------MPSRFRGSKWPRQCTLGIFNNGLQNLIIVNTHFDFSSDVQ 159

Query: 148 LIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF 207
           +  A       + H    PII   D   T +     +    +          +   + + 
Sbjct: 160 VKSAKLIRKRLRRHSKKGPIILMGDFNATPDSGCYNEFTSKVDAYPKFFDAFNNSAIRTC 219

Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEP 266
             +      KNKG  ID I+ S      + ++++ T       PSDH P+I S   P P
Sbjct: 220 HRFSG----KNKGEAIDWILYSGNLI--IDNSQVITSKFSGRYPSDHYPLIASFVFPSP 272


>gi|294868438|ref|XP_002765538.1| hypothetical protein Pmar_PMAR002075 [Perkinsus marinus ATCC
          50983]
 gi|239865581|gb|EEQ98255.1| hypothetical protein Pmar_PMAR002075 [Perkinsus marinus ATCC
          50983]
          Length = 965

 Score = 46.7 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/35 (31%), Positives = 24/35 (68%)

Query: 4  VTVATWNVNSIRARIHNLAAWIKENNPDIICLQET 38
          +TV ++N++ +      L  +++ ++PD++CLQET
Sbjct: 23 LTVISYNIHGLCGSKLELLQYLRRSSPDVVCLQET 57


>gi|327541576|gb|EGF28107.1| secreted protein containing Endonuclease/exonuclease/phosphatase
           domain [Rhodopirellula baltica WH47]
          Length = 284

 Score = 46.7 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 34/252 (13%), Positives = 72/252 (28%), Gaps = 39/252 (15%)

Query: 19  HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIE 78
             LA  +   +PDII   E  +  +    E  + L  +         N    L     I 
Sbjct: 64  KRLAMELALYDPDIINFSE--SPSEKLTKEIAELLGMN-HVRFPSGGNWPGTLLSKSKIS 120

Query: 79  IVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFA 138
              ++P +    +  F         +      L +   +   + +   ++  I+  +   
Sbjct: 121 DPQNVPMNGERPKELFTRHWGRALVELPNDEPLIVHSAHLYPTPEPTIRLKEIRAMIESM 180

Query: 139 SQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT 198
              L+    ++  GD N  P   +    I                    + G+ D     
Sbjct: 181 KSDLDSGRSMLLIGDLNHSPDTDEYKLWI--------------------DAGWIDTFAKV 220

Query: 199 HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA--------RIDTKPRGWTK 250
            + +  ++         + N   RID++  +      +  +        R++ +      
Sbjct: 221 GEGNG-FT-------IKADNPEWRIDYVFATGPIAKRVSESRPLFEGAFRVNNEDEKSYA 272

Query: 251 PSDHTPVIVSLD 262
            SDH P     D
Sbjct: 273 LSDHLPQFAVFD 284


>gi|322376933|ref|ZP_08051426.1| RgfB protein [Streptococcus sp. M334]
 gi|321282740|gb|EFX59747.1| RgfB protein [Streptococcus sp. M334]
          Length = 271

 Score = 46.7 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/273 (11%), Positives = 79/273 (28%), Gaps = 16/273 (5%)

Query: 4   VTVATWNVNSI--RARIHNLAAWIKE---NNPDIICLQETK-------TEDKNFPFETLQ 51
           +   T N +S   +         +++    + D+IC QE          E  +       
Sbjct: 1   MKFLTLNTHSWMEKEAEEKFQLLLEDVLDKDYDLICFQEINQEITSSEVEVNDLYQALPA 60

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
           +   H +   +     ++   K        +  G D   +   I +   I  + + + ++
Sbjct: 61  AEPIHQDHYVRLLVEKLSEQGKNYYWTWAYNHIGYDRYHEGVAILSKTPIEAREILVSDV 120

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG-DYNIIPQPHDCYNPIIWE 170
             P           + +   K     +      ++        +  + +  +    +  +
Sbjct: 121 DDPTDYHTRRIALAETVVDGKELAVASVHLSWWDKGFQEEWARFEAVLKELNKPLLLAGD 180

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230
            +     E  Q+      +G  DA     +    Y+            + +RID+I  + 
Sbjct: 181 FNNPAGQEGYQAILASP-LGLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYIFTTK 239

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           E    +    +        + SDH  +   L+ 
Sbjct: 240 ELA--VEKLHVVFDGNKSPQVSDHYGLNAILNW 270


>gi|167522888|ref|XP_001745781.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163775582|gb|EDQ89205.1| predicted protein [Monosiga brevicollis MX1]
          Length = 481

 Score = 46.7 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 1/50 (2%)

Query: 191 FTDAIRATHDTHH-LYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
             D+    H T    ++ WD Y +   +N+G RID+++L  +   LL  +
Sbjct: 235 MLDSFTTLHPTAQARFTCWDQYKNRRYENRGSRIDYVLLDQDLAGLLVGS 284


>gi|158293194|ref|XP_558090.3| AGAP010556-PA [Anopheles gambiae str. PEST]
 gi|157016841|gb|EAL40350.3| AGAP010556-PA [Anopheles gambiae str. PEST]
          Length = 876

 Score = 46.7 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 41/298 (13%), Positives = 74/298 (24%), Gaps = 39/298 (13%)

Query: 7   ATWNVNSIRARIHNLAAWIKENN--PDI--ICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           ATWNVN   +    L  W+   +  PDI  +  QE +   +       +     ++    
Sbjct: 204 ATWNVNGQTSETIELPEWLATTDSPPDIYAVGFQEIEWTPEKILMNETKIDRTWVDKVMS 263

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
             + G           +   +          + +    +          +   G    S 
Sbjct: 264 GLHKGAIYTELASVRLV--GMMLTVAVKSTIYPKINDCLTAAVGTGTLKWGNKGGVGVSF 321

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           K ++ +         A  +               +   +      I E+   F +     
Sbjct: 322 KLNEALFCFVNTHLAAHTQEVERRNDDHDDIIRRMSFDNGFRMRSIDEHHHIFWIGDLNY 381

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH----IML---------- 228
                 +      R   D + LY   D       +N+  R D+    I+           
Sbjct: 382 RLDGPEVSQEYVNRKDRDYNQLYQH-DQLYVEKRRNRIFR-DYKEGKILFPPTYKYNPGT 439

Query: 229 ----------SPEATSLL--HSARI----DTKPRGWTKPSDHTPVIVSLDIPEPRKKQ 270
                     +P     +     RI            K SDH PV     +    K Q
Sbjct: 440 DEWDSSEKSRTPAWCDRILWKGQRIEMLRYNSVMQLRK-SDHKPVYADFKVDAQAKDQ 496


>gi|313682984|ref|YP_004060722.1| endonuclease/exonuclease/phosphatase [Sulfuricurvum kujiense DSM
           16994]
 gi|313155844|gb|ADR34522.1| Endonuclease/exonuclease/phosphatase [Sulfuricurvum kujiense DSM
           16994]
          Length = 335

 Score = 46.7 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 43/322 (13%), Positives = 82/322 (25%), Gaps = 67/322 (20%)

Query: 4   VTVATWNV------------------NS--------IRARIHNLAAWIKENNPDIICLQE 37
           V +AT+NV                  N          RA++ N A  I+    DII LQE
Sbjct: 19  VKIATYNVENLFDMHYDGTEYEEYIPNGDWGWTNEMYRAKLINTATVIRGIGADIIGLQE 78

Query: 38  TKTED--KNFPFETLQ---SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQA 92
            ++E   K+   E  +      Y+     + S   VA+LS+Y     + H        + 
Sbjct: 79  IESESALKDLKAEINRQGLYYPYYAFAKTRNSAVNVALLSRYPIQSALKHPVNYSGKYRD 138

Query: 93  RFIEATFTINTQTLRIGNLYLPHGNP-----ITSTKYDDKISWIKRFLRFASQRLELEEP 147
                            N +   G P     + + +   +++ +     +          
Sbjct: 139 ILEAKILIEEKPLRVFVNHWKSKGGPESERIVCAKRLLQRLNELPEDEPYVLVGDFNSHY 198

Query: 148 LIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF 207
                        +      I         E                    ++       
Sbjct: 199 EEHKTFLKSRKHNNTDGITGINHILGTVNKEGNPITYTALKNTQGVRYNLWYELDKEKR- 257

Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLL------------------HSARIDTKPRGWT 249
           W +      +  G  +D+I++S      +                     ++    +   
Sbjct: 258 WSHQF----RGHGEGLDNIIISQALADGIGIDYIEGSFDRYTPDYLFAKGKVYRWQQSRR 313

Query: 250 KP--------SDHTPVIVSLDI 263
            P        SDH P+     +
Sbjct: 314 YPKHHLGEGYSDHLPIYARFKL 335


>gi|150390789|ref|YP_001320838.1| endonuclease/exonuclease/phosphatase [Alkaliphilus metalliredigens
           QYMF]
 gi|149950651|gb|ABR49179.1| Endonuclease/exonuclease/phosphatase [Alkaliphilus metalliredigens
           QYMF]
          Length = 379

 Score = 46.7 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 35/261 (13%), Positives = 68/261 (26%), Gaps = 45/261 (17%)

Query: 4   VTVATWNVN------SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57
           + + ++N++        R  +  +A  IKE+  ++I LQE    D++F     Q      
Sbjct: 152 LRIMSYNIHIGRDLFG-RYSLDQIAEVIKESRAEVIGLQEV---DQHFIRTKFQD----- 202

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
                 S       +    + IV    G+ +       +    +         L     +
Sbjct: 203 -QIKYLSEELGMNYAYGPNLNIVGAKYGNAVLSVHPIEDYENVMIPSGRESRGLLKTTID 261

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
                                 Q   +E+ +  A +  I+    +              L
Sbjct: 262 VEGQLVDFFVTHLGLNQKERMGQVKVIEQQIDMAQNPVILVGDFNARPHSQEIQKLSRGL 321

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
                     +    D    +                       RID+I +  +      
Sbjct: 322 LDVGKRMGYNDTPTFDLPVLSG----------------------RIDYIFVDQQM----- 354

Query: 238 SARIDTKPRGWTKPSDHTPVI 258
              I T     ++ SDH PV 
Sbjct: 355 --EILTYRVIKSRASDHYPVT 373


>gi|115689672|ref|XP_796533.2| PREDICTED: similar to CCR4 carbon catabolite repression 4-like
           [Strongylocentrotus purpuratus]
 gi|115945120|ref|XP_001179947.1| PREDICTED: similar to CCR4 carbon catabolite repression 4-like
           [Strongylocentrotus purpuratus]
          Length = 365

 Score = 46.7 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 42/284 (14%), Positives = 77/284 (27%), Gaps = 56/284 (19%)

Query: 4   VTVATWNV----------NSIR---------ARIHNLAAWIKENNPDIICLQETKTEDKN 44
           V V  WN+          N I+          R + +   I   +PD++CLQE     ++
Sbjct: 107 VRVMAWNILADALSMGADNFIKCPKESLLWDNRKYAIIEEILTYDPDVVCLQEVD-HYED 165

Query: 45  FPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
           F    LQ + Y      +                +     G         +       ++
Sbjct: 166 FFLPVLQQVGYSGAFNPKPDSP-----------CLEVDYNGKKFVSNQVAVMHHLKCISE 214

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
            L      +   +      Y+   +   + L    ++     PLI  GD+N  P      
Sbjct: 215 KLLDEEFCIATTHLKAKHGYETMRAKQGQHLIEVLKKCSKNLPLIVGGDFNAEPTE---- 270

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRID 224
                  D     E                +         Y+ W         +    ID
Sbjct: 271 -------DVYSVYETSDLNL----ASAYKKLSEDGMQEPPYTTWKIRPRREECHT---ID 316

Query: 225 HIMLSPEATSLLH------SARIDTKPR-GWTKPSDHTPVIVSL 261
           ++  + E    +          I ++    W+ PSDH  ++   
Sbjct: 317 YMWYTQEHLEPVALLRFPGEKEIGSERLPSWSYPSDHLSLVCDF 360


>gi|57863772|ref|NP_001009928.1| nocturnin [Gallus gallus]
 gi|33323505|gb|AAQ07476.1|AF503351_1 nocturnin [Gallus gallus]
          Length = 419

 Score = 46.7 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 35/264 (13%), Positives = 71/264 (26%), Gaps = 28/264 (10%)

Query: 21  LAAWIKENNPDIICLQETKTEDKNFP--FETLQSLNYHIETCGQKSYNGVAILSKYQPIE 78
           +   I    PDI+CLQE    D  F      L  L Y      +         S    +E
Sbjct: 167 ILEEILAYKPDILCLQEV---DHYFDTFEPLLSRLGYQCTFFPKP-------WSPCLDVE 216

Query: 79  IVTHLPGDDLDVQARFIEATFT--INTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
                 G  L       E   +  I    +++    +     +  ++           L+
Sbjct: 217 QNNGPDGCALFFLKERFELINSANIRLTAMKLKTNQVAIAQTLKCSETGRLFCIAVTHLK 276

Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN----MGFT 192
             +               N+         P+I   D           +   +        
Sbjct: 277 ARTGWERFRSAQGCDLLQNLKSITQGAKIPLIICGDFNAEPTEEVYREFSNSSLNLNSAY 336

Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR------ 246
             +     +   Y+ W        ++    +D+I  S  A ++  +  + T+ +      
Sbjct: 337 KLLSPDGQSEPPYTTWKIRPSGECRHT---LDYIWYSQHALNVNSALGLLTEEQIGPNRL 393

Query: 247 -GWTKPSDHTPVIVSLDIPEPRKK 269
             +  PSDH  ++      +   +
Sbjct: 394 PSFNYPSDHLSLVCDFSFNQDPDR 417


>gi|308471696|ref|XP_003098078.1| hypothetical protein CRE_11299 [Caenorhabditis remanei]
 gi|308269419|gb|EFP13372.1| hypothetical protein CRE_11299 [Caenorhabditis remanei]
          Length = 943

 Score = 46.7 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 43/280 (15%), Positives = 89/280 (31%), Gaps = 25/280 (8%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENN---PDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           + + T+N  S+ A  + LA  ++E N    DII L ETK   +                 
Sbjct: 21  LRICTFNCRSV-ATDNRLAELLEETNRIKYDIIGLSETKRSAE-VHMTNRDGTG---VIL 75

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           G+++ + V+    +   + +     +   V  R    T  +N     I   Y P  +   
Sbjct: 76  GKRNDSSVSGGVGFIINKSLMPKIKEIKIVNHRIGYLTLQVNKNQYTIIQGYAPTADYEE 135

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
               +   +    +    S+   +              +     + +   ND+   L   
Sbjct: 136 EDHSNFYENLEDVYKSCKSRYKMVIGDFNARIGERKGNEVFIGPHSMENRNDSGERL--- 192

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            +     N  F    +    TH  +++         +     +DHI+ +      +    
Sbjct: 193 -ATFCEVNRVFHMNSQFIKPTHRRWTYISPDKQHRHE-----LDHILANG---KYITDVS 243

Query: 241 IDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
           +      +T  SDH  +  ++ I   + K +    +  KP
Sbjct: 244 V---VPSFTNGSDHRMLRANVHINAKQAKFEQV--KRRKP 278


>gi|237710997|ref|ZP_04541478.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|229454841|gb|EEO60562.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
          Length = 334

 Score = 46.7 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 40/257 (15%), Positives = 76/257 (29%), Gaps = 37/257 (14%)

Query: 4   VTVATWNVNSIRARIHNL---AAWIKENNPDIICLQE---TKTEDKNFPFETLQSLNYHI 57
           + +  WN    R     L   A  I+   P I+CLQE   T     +          Y I
Sbjct: 96  LKLVCWNTEGFRLNKDTLTKAAHSIRVLQPGIVCLQERPHTNLLAWDTIRAAFPDYPYCI 155

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
               +     +A+ S++    +  +      +   + ++A   +  QT R+ N++L    
Sbjct: 156 INSREDEVLNLAVFSRWPIGNVQEYYF---PNSYNKILQADIQMTGQTFRLFNVHLQTTG 212

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
              S      +    + +R  + +   +  L+             C +         +  
Sbjct: 213 MNES----YSMKDRFQAMRHHTVQRNRQADLLTKAIAESPYPVIVCGDFNDTPASYAYRK 268

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
             R         G T +          Y  W      +     +RID+   SP       
Sbjct: 269 ISRLLQDCFLQAGQTWS--------GSYQCW----GGF-----LRIDYTFCSPAF----- 306

Query: 238 SARIDTKPRGWTKPSDH 254
             +++         SDH
Sbjct: 307 --QVNRYLLISNPWSDH 321


>gi|218264352|ref|ZP_03478209.1| hypothetical protein PRABACTJOHN_03900 [Parabacteroides johnsonii
           DSM 18315]
 gi|218222083|gb|EEC94733.1| hypothetical protein PRABACTJOHN_03900 [Parabacteroides johnsonii
           DSM 18315]
          Length = 287

 Score = 46.7 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 40/271 (14%), Positives = 76/271 (28%), Gaps = 32/271 (11%)

Query: 4   VTVATWNVNSIRA------------RIHNLAAWIKENNPDIICLQETKTEDKNFP--FET 49
           + V ++N   IR             R    A  IK  + D+   QE            + 
Sbjct: 27  MNVMSFN---IRMSTKSDGANWWEYRKDLAANVIKFYDVDMFGAQEV--LHNQLTDLLDR 81

Query: 50  LQSLNYHIETCGQKSYNGVA--ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107
           L    Y           G    I  +     +V        +      +  +    + + 
Sbjct: 82  LPDYGYVGVGREDGKTKGEYSPIFYRKDRFSVVKSGNFWLAEDMNAVGKKGWDAACERVA 141

Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167
              ++    +       +  +  + +  R     L LE+  + AG+  +I        P 
Sbjct: 142 TWAVFKDKESEKEFFFLNTHLDHMGQIARHEGASLVLEQVKLLAGNLPVIVTGDFNAVPT 201

Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227
                     +  +               A       ++F DY       ++ + ID+I 
Sbjct: 202 DDPIKVLTDEKDLR-------HLTHTRTLAPLCYGPEWTFHDY--GRVPLDERVWIDYIF 252

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVI 258
           +       +    + T+  G   PSDH PVI
Sbjct: 253 IKGNI--KVLRHGVLTESLGNLYPSDHCPVI 281


>gi|312214267|emb|CBX94260.1| hypothetical protein [Leptosphaeria maculans]
          Length = 1190

 Score = 46.7 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 50/328 (15%), Positives = 80/328 (24%), Gaps = 68/328 (20%)

Query: 2   SVVTVATWNVNSIR----ARIHNLAAW---IKENNP--DIICLQETKTEDK--NFPFETL 50
           S + + T N   ++     R   L      I    P  DI+ LQE  T++       +T 
Sbjct: 10  SSLRILTLNCWGLKFISKLRHERLTEIGVQIAAAKPTPDIVGLQECWTQEDYNAIREKTH 69

Query: 51  QSLNYHIETCGQKSYNGVAILSKYQPI---EIVTHLPGDDLDVQARFIEATFTINTQTLR 107
             L Y           G+AILSK+       +   L G               +    +R
Sbjct: 70  HILPYGKFYWSGIFGGGLAILSKWPIEESNMVRYPLNGRPAAFYRGDWFVGKGVACARIR 129

Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIF------------AGDYN 155
           +G           +  +                    E   +              GD+N
Sbjct: 130 MGPSRRDVAEVFCTHLHAPYEREPHDSYICHRTAQAWEITKLMRAAAERGHLVIGLGDFN 189

Query: 156 IIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY---------- 205
           ++P                    +             +  R        Y          
Sbjct: 190 MVPLSLAHRIIETHSPVKDVWRILHPDSSIGAAKDAVEQARERPMPTAEYNMTINGATCD 249

Query: 206 ----SF-WDY---YADSWSKNKGI----------RIDHIMLS-----------PEATSLL 236
               S+ W+       +  +N  I          R+D+I  S             A   L
Sbjct: 250 SALNSWRWNQAHKRRLARGENVQIEPTVPDPDAKRLDYIFFSSPRYRDGGTGNEAADWEL 309

Query: 237 HSARI---DTKPRGWTKPSDHTPVIVSL 261
             A +      P      SDH  V  +L
Sbjct: 310 KEANVGMEMRHPTLHCSLSDHFSVEATL 337


>gi|312864007|ref|ZP_07724243.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           vestibularis F0396]
 gi|311100420|gb|EFQ58627.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           vestibularis F0396]
          Length = 271

 Score = 46.7 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/276 (10%), Positives = 70/276 (25%), Gaps = 26/276 (9%)

Query: 4   VTVATWNVNSIRARIH----NLAAWIKEN----NPDIICLQETKTEDKNFPFETLQ-SLN 54
           +   T N +S    +          +KE       DIIC QE    ++      ++    
Sbjct: 1   MKFLTLNTHS---WMEEDAEGKFQTLKEQILKAQYDIICFQEV---NQEIETAAVETDAY 54

Query: 55  YHIETCGQKSYNGVAIL---------SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT 105
           YH        +    +                    +  G D   +   + +   + +  
Sbjct: 55  YHALPSATPIHQDHFVRLLVEKLAEEGLQYHWTWAYNHIGYDHLNEGVAVLSRQPLTSSE 114

Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165
           + + ++  P           +     +     +      ++                   
Sbjct: 115 ILVSDVDDPTDYHTRRVAVAETAVDGREVAVASVHLSWWDKGFQEEWARIEGRFQSIGKP 174

Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225
            I+  +                 +   D+ +   +T+  Y+            + +RID+
Sbjct: 175 LILAGDFNNPAGREGYQAILASPLTLQDSFQVAQETNGSYTVGPGIDGWKGNEEPLRIDY 234

Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           +  S E    ++   +          SDH  +   L
Sbjct: 235 VFASQEWA--VNHLSVIFDGNNQPLVSDHYGLEAEL 268


>gi|262037338|ref|ZP_06010804.1| endonuclease/exonuclease/phosphatase [Leptotrichia goodfellowii
           F0264]
 gi|261748641|gb|EEY36014.1| endonuclease/exonuclease/phosphatase [Leptotrichia goodfellowii
           F0264]
          Length = 249

 Score = 46.7 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 38/255 (14%), Positives = 71/255 (27%), Gaps = 59/255 (23%)

Query: 20  NLAAWIKENNPDIICLQET-----KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKY 74
            +  +IK  NPDI+ L E      +TE+KN      +    H     +   N   +    
Sbjct: 36  RIGEFIKGYNPDIVGLVEVDLGSFRTEEKNQAELLGKITGNHCVFQYKYQKNSRYMKVPM 95

Query: 75  QPIE------IVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKI 128
              +                 +     +    I T ++ +  ++L  G      +     
Sbjct: 96  VRKQGNALLSKTEIKSKKFHYLNNGMKKLVMEIETDSVTVFLVHLALGGKTRLKQIVQLR 155

Query: 129 SWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN 188
             I+   +            I AGD+N++              +    L +  S     N
Sbjct: 156 KLIQDCRKP----------FIVAGDFNVL------------WGNEEIELFLEASGLHNVN 193

Query: 189 MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGW 248
           +       +                         +D I+ S E    +   ++       
Sbjct: 194 VHREPTFPSWAPKKE-------------------LDFILCSKEI--KVKEFQVIKTLL-- 230

Query: 249 TKPSDHTPVIVSLDI 263
              SDH PVI+  +I
Sbjct: 231 ---SDHLPVIIDFEI 242


>gi|118374759|ref|XP_001020567.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena
           thermophila]
 gi|89302334|gb|EAS00322.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena
           thermophila SB210]
          Length = 253

 Score = 46.7 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 45/274 (16%), Positives = 84/274 (30%), Gaps = 55/274 (20%)

Query: 6   VATWNV----------NSIRARIHNLAAWIKENNPDIICLQET----------KTEDKNF 45
           +  +N+          N     I  + + I+  NPD+ICLQE           + +    
Sbjct: 11  IICYNIHHGADVNDNYN-----IQKIISTIENQNPDVICLQEVDNNYSERSLNQLQP-QI 64

Query: 46  PFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT 105
             + +Q +     +   K+  G+  LSK + I+  T +    L     F         Q 
Sbjct: 65  LTQQIQGIKESYFSPTIKNSYGILTLSKQKIIDYHTQILTTGLKEDRTFQYLKLQNGLQI 124

Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165
           +                +       +  F     ++L+++   I  GD+N          
Sbjct: 125 IHFHLNNSFD------QQRSRYHQLLTIFEILDKKQLDIKNNTIICGDFNEDCDGQRYCE 178

Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225
                             QK          + +    +LY+F         KN    IDH
Sbjct: 179 EEC---------VFDLLEQKKFFNAKKLYEQKSGTQDNLYTF-----SRKYKNIN--IDH 222

Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
             ++ +    ++S +I          SDH P+ +
Sbjct: 223 FYVTNDI--NINSFKIIDSD-----ASDHNPIFL 249


>gi|294852706|ref|ZP_06793379.1| endonuclease/exonuclease/phosphatase [Brucella sp. NVSL 07-0026]
 gi|294821295|gb|EFG38294.1| endonuclease/exonuclease/phosphatase [Brucella sp. NVSL 07-0026]
          Length = 275

 Score = 46.7 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 46/141 (32%), Gaps = 24/141 (17%)

Query: 145 EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL 204
           E   +  GD+N   +            +    +E   +   L   GF   +         
Sbjct: 136 ERRWLICGDFNDYRERILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDR 195

Query: 205 YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA-------------------RIDTKP 245
           ++ +             ++D+IM SP   +    A                    +D  P
Sbjct: 196 WTLYHTRGPLER--HLCQLDYIMASPAFAAKNEHAVPDIIRRGQPWRTIFPPEQNVDRYP 253

Query: 246 R-GWTKP--SDHTPVIVSLDI 263
           R GW +P  SDH PV V+L++
Sbjct: 254 RTGWDRPKASDHCPVSVTLNM 274


>gi|73964664|ref|XP_849457.1| PREDICTED: similar to a disintegrin and metalloprotease domain 6,
           partial [Canis familiaris]
          Length = 904

 Score = 46.7 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 39/110 (35%), Gaps = 12/110 (10%)

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
               + E R     L  M FTD  R  H     Y+F+     ++S     RIDHI+    
Sbjct: 9   KHNISKETRALSDTLDQMDFTDIYRTLHPNSTEYTFFSGAHGTFS-----RIDHILGHKS 63

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
             +                 SDH  + + L+    +K  + S +  ++ I
Sbjct: 64  GLNRYQKIGTIRCI-----FSDHNALKLELN--HNKKFGRTSNTWRLRTI 106


>gi|218661945|ref|ZP_03517875.1| putative exodeoxyribonuclease III [Rhizobium etli IE4771]
          Length = 37

 Score = 46.7 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI-PEPRKK 269
             + SA I+   R W KPSDH PVI   D+ P+ R  
Sbjct: 1   DRMTSAAIEKHVRAWEKPSDHVPVIAYFDLRPDIRSP 37


>gi|149641541|ref|XP_001509976.1| PREDICTED: similar to angel homolog 2 (Drosophila) [Ornithorhynchus
           anatinus]
          Length = 523

 Score = 46.7 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 41/131 (31%), Gaps = 5/131 (3%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73
           R  N+   IK  N D++CLQE   ++ ++  E    L+SL YH E   +           
Sbjct: 178 RFPNILKEIKHLNADVLCLQEV--QENHYKKEIRPSLESLGYHCEFKMRTGRKPDGCAIC 235

Query: 74  YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKR 133
           ++  +            +              L +   +     P      +  + +  R
Sbjct: 236 FKFSKFALVSANPVEFYRHNIPLLDRDNVGLVLLLQPKFQYTATPAALCVANTHLLYNPR 295

Query: 134 FLRFASQRLEL 144
                  +L +
Sbjct: 296 RGDIKLTQLAM 306


>gi|149007639|ref|ZP_01831256.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae SP18-BS74]
 gi|307127690|ref|YP_003879721.1| metal-dependent hydrolase [Streptococcus pneumoniae 670-6B]
 gi|147760794|gb|EDK67765.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae SP18-BS74]
 gi|306484752|gb|ADM91621.1| metal-dependent hydrolase [Streptococcus pneumoniae 670-6B]
 gi|332077175|gb|EGI87637.1| endonuclease/Exonuclease/phosphatase family protein [Streptococcus
           pneumoniae GA17545]
          Length = 271

 Score = 46.7 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/264 (10%), Positives = 68/264 (25%), Gaps = 14/264 (5%)

Query: 4   VTVATWNVNSI--RARIHNL---AAWIKENNPDIICLQETK-------TEDKNFPFETLQ 51
           +   T N +S   +            I E + D+IC QE          E  +       
Sbjct: 1   MKFLTLNTHSWMEKEAEEKFQILLEDILEKDYDLICFQEINQEMTSSEVEVNDLYQALPA 60

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
           +   H +   +     +    K        +  G D   +   I +   I  + + + ++
Sbjct: 61  AEPIHQDHYVRLLVEKLLEQGKNYYWTWAYNHIGYDRYHEGVAILSKTPIEAREILVSDV 120

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
             P           + +   K     +      ++                    ++  +
Sbjct: 121 DDPTDYHTRRVALAETVVDGKELAVASVHLSWWDKGFQEEWARFEAVLKKLNKPLLLAGD 180

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
                 +          +   DA     +    Y+            + +RID++  + E
Sbjct: 181 FNNPAGQEGYQAILASPLDLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTTKE 240

Query: 232 ATSLLHSARIDTKPRGWTKPSDHT 255
               + +  +        + SDH 
Sbjct: 241 LA--VENLHVVFDGNKSPQVSDHY 262


>gi|46127109|ref|XP_388108.1| hypothetical protein FG07932.1 [Gibberella zeae PH-1]
          Length = 309

 Score = 46.7 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/239 (10%), Positives = 67/239 (28%), Gaps = 9/239 (3%)

Query: 33  ICLQE-TKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQ 91
           +C+QE T  + ++   +     +Y+       +    + +     +  +       L   
Sbjct: 68  VCMQEATYPQIQDLQEDLGDEWDYYGVGRKGGNRGEFSPIFYRPSVWNMEDSKTYWLSST 127

Query: 92  ARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFA 151
              + +          +      H +      Y   +          ++    +     A
Sbjct: 128 PHKVGSRGWDAAFPRIVTVARFQHISTGNRLVY---MCTHFDHKGKTARENSAKLISATA 184

Query: 152 GDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYY 211
            +++     +         N +      +     + ++     +         Y+   Y 
Sbjct: 185 EEWSSYGFDNVPVFIGGDLNSSPDEPAYKHLASAMNDVKSIIPLAKRFGHS-SYT---YT 240

Query: 212 ADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR-GWTKPSDHTPVIVSLDIPEPRKK 269
             + S +  + +DHI +   +     S  +           SDH PV+V L +    +K
Sbjct: 241 GFTVSPSDDMDLDHIFVKDTSGLQFKSFAVLNNLYEDGVFISDHRPVVVDLRLNHVSRK 299


>gi|307702031|ref|ZP_07639039.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           mitis NCTC 12261]
 gi|307616676|gb|EFN95865.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           mitis NCTC 12261]
          Length = 271

 Score = 46.7 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/272 (10%), Positives = 74/272 (27%), Gaps = 14/272 (5%)

Query: 4   VTVATWNVNSI--RARIHNLAAWIKEN---NPDIICLQETK-------TEDKNFPFETLQ 51
           +   T N +S   +         +++    + D+IC QE          E  +F      
Sbjct: 1   MKFLTLNTHSWMEKEAEEKFQLLLEDILDKDYDLICFQEINQEITSLEVEVNDFYQALPA 60

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
           +   H +   +     ++   K        +  G D   +   I +   I  + + + ++
Sbjct: 61  AEPIHQDHYVRLLVEKLSEQGKNYYWTWAYNHIGYDRYHEGVAILSKTPIEAREILVSDV 120

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
             P           + +         +      ++                    ++  +
Sbjct: 121 DDPTDYHTRRVALAETVVDGNELAVASVHLSWWDKGFQEEWARIEAVLKELNKPLLLAGD 180

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
                 +          +G  DA     +    Y+            + +RID++  + E
Sbjct: 181 FNNPAGQEGYQAILASPLGLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTTKE 240

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
               + +  +        + SDH  +   L+ 
Sbjct: 241 LA--VENLHVVFDGNKSPQVSDHYGLNAILNW 270


>gi|265750587|ref|ZP_06086650.1| predicted protein [Bacteroides sp. 3_1_33FAA]
 gi|263237483|gb|EEZ22933.1| predicted protein [Bacteroides sp. 3_1_33FAA]
          Length = 334

 Score = 46.7 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 40/257 (15%), Positives = 76/257 (29%), Gaps = 37/257 (14%)

Query: 4   VTVATWNVNSIRARIHNL---AAWIKENNPDIICLQE---TKTEDKNFPFETLQSLNYHI 57
           + +  WN    R     L   A  I+   P I+CLQE   T     +          Y I
Sbjct: 96  LKLVCWNTEGFRLNKDTLTKAAHSIRVLQPGIVCLQERPHTNLLAWDTIRAAFPDYPYCI 155

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
               +     +A+ S++    +  +      +   + ++A   +  QT R+ N++L    
Sbjct: 156 INSREDEVLNLAVFSRWPIGNVQEYYF---PNSYNKILQADIQMTGQTFRLFNVHLQTTG 212

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
              S      +    + +R  + +   +  L+             C +         +  
Sbjct: 213 MNES----YSMKDRFQAMRHHTVQRNRQADLLTKAIAESPYPVIVCGDFNDTPASYAYRK 268

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
             R         G T +          Y  W      +     +RID+   SP       
Sbjct: 269 ISRLLQDCFLQAGQTWS--------GSYQCW----GGF-----LRIDYTFCSPAF----- 306

Query: 238 SARIDTKPRGWTKPSDH 254
             +++         SDH
Sbjct: 307 --QVNRYLLISNPWSDH 321


>gi|218200121|gb|EEC82548.1| hypothetical protein OsI_27091 [Oryza sativa Indica Group]
          Length = 486

 Score = 46.7 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 39/307 (12%), Positives = 86/307 (28%), Gaps = 53/307 (17%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDK---NFPFETLQSLNY-HIETCGQKSYNGVAILS 72
           R  ++   ++E   DII LQ  + E++   +   E  + L   ++         G A+LS
Sbjct: 172 RRRSVEEVLREVGADIIGLQNVRAEEERGMSPLSELAEGLGMRYVFAESWAPEYGDAVLS 231

Query: 73  KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIK 132
           ++    I         D           +  +  R+ + +    N         K     
Sbjct: 232 RWP---IKRWKSQRVADQSDFRCSKVRYVRAKNFRVESKHGLILNVDNHLSDRSKKCLYF 288

Query: 133 RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL------ 186
                    +E+        +++     H   +  + + +A                   
Sbjct: 289 EMKNVLRATIEVPRAGEV--NFHCTHLDHLDESWRMKQMNAILRSSDGPHILTGGLNALD 346

Query: 187 ---QNMGFTDAIRATHDTHHLYS-------------FWDYYADSWSK------------- 217
               +      I   ++     +             + D  A  ++              
Sbjct: 347 GTDYSDERWADIVKYYEEIGKPTPKAEVMKYLKGKQYVD--AKDFAGECEAVVVVAKGQD 404

Query: 218 -----NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQD 272
                  G R+D+I+ SP +                   SDH  V V + I + ++  ++
Sbjct: 405 VQGTCKYGTRVDYILASPNSPYKFVPGS--YTVISSKGTSDHHIVKVDVTIQDKKETDEE 462

Query: 273 STSQNMK 279
           S +Q  +
Sbjct: 463 SGNQRQR 469


>gi|148997164|ref|ZP_01824818.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae SP11-BS70]
 gi|168575419|ref|ZP_02721355.1| metal-dependent hydrolase [Streptococcus pneumoniae MLV-016]
 gi|225860733|ref|YP_002742242.1| metal-dependent hydrolase [Streptococcus pneumoniae Taiwan19F-14]
 gi|307067363|ref|YP_003876329.1| metal-dependent hydrolase [Streptococcus pneumoniae AP200]
 gi|147756864|gb|EDK63904.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae SP11-BS70]
 gi|183578405|gb|EDT98933.1| metal-dependent hydrolase [Streptococcus pneumoniae MLV-016]
 gi|225726547|gb|ACO22398.1| metal-dependent hydrolase [Streptococcus pneumoniae Taiwan19F-14]
 gi|306408900|gb|ADM84327.1| Metal-dependent hydrolase [Streptococcus pneumoniae AP200]
 gi|327390116|gb|EGE88459.1| endonuclease/Exonuclease/phosphatase family protein [Streptococcus
           pneumoniae GA04375]
          Length = 271

 Score = 46.7 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/264 (11%), Positives = 69/264 (26%), Gaps = 14/264 (5%)

Query: 4   VTVATWNVNSI--RARIHNL---AAWIKENNPDIICLQETK-------TEDKNFPFETLQ 51
           +   T N +S   +            I E + D+IC QE          E  +       
Sbjct: 1   MKFLTLNTHSWMEKEAEEKFQILLEDILEKDYDLICFQEINQEMTSSEVEVNDLYQALPA 60

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
           +   H +   +     +    K        +  G D   +   I +   I  + + + ++
Sbjct: 61  AEPIHQDHYVRLLVEKLLEQGKNYYWTWAYNHIGYDRYHEGVAILSKTPIEAREILVSDV 120

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
             P           + +   K     +      ++                    ++  +
Sbjct: 121 DDPTDYHTRRVALAETVVDGKELAVASVHLSWWDKGFQEEWARFEAVLKKLNKPLLLAGD 180

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
                 +          +G  DA     +    Y+            + +RID++  + E
Sbjct: 181 FNNPAGQEGYQAILASPLGLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTTKE 240

Query: 232 ATSLLHSARIDTKPRGWTKPSDHT 255
               + +  +        + SDH 
Sbjct: 241 LA--VENLHVVFDGNKSPQVSDHY 262


>gi|150377262|ref|YP_001313857.1| endonuclease/exonuclease/phosphatase [Sinorhizobium medicae WSM419]
 gi|150031809|gb|ABR63924.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium medicae WSM419]
          Length = 268

 Score = 46.7 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/277 (11%), Positives = 76/277 (27%), Gaps = 29/277 (10%)

Query: 4   VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQE-TKTE----------DKNFPFETLQ 51
           + + + N      RIHN L  ++     DI+CLQE  +T           D +       
Sbjct: 1   MRILSLNAWG--GRIHNPLLKYLGSTKADILCLQEVVRTSGQPHGWLTYRDGDLRLPQRS 58

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
           +L +        ++           +              A F+  ++    + L   + 
Sbjct: 59  NL-FDEIRALLPAHRAQFFPVARGLLHDDYGREIWSEFGLATFVRESYATIGEALGFVHG 117

Query: 112 YLPHGNPITSTKYDDKIS---WIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY---- 164
                +     +  +      +      +A+                             
Sbjct: 118 AFTPDSWGEHPRARNAHCVRVFDPDSGLYATIAQMHGLRDPAGKGDTPARAEQSMRLVKL 177

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRID 224
              +W  D    +    +     +     A     D      + D    S+ + +G   D
Sbjct: 178 IESVWPGDERLVVCGDFNLLPQSSTFARLATLGLSDLVTGRGYTDTRT-SFYEKEGRFAD 236

Query: 225 HIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           +++++      +    +   P    + SDH P+++ L
Sbjct: 237 YMLVNDRVD--VVGFEVVADP----EVSDHRPLLLKL 267


>gi|298674416|ref|YP_003726166.1| deoxyribonuclease I [Methanohalobium evestigatum Z-7303]
 gi|298287404|gb|ADI73370.1| Deoxyribonuclease I [Methanohalobium evestigatum Z-7303]
          Length = 447

 Score = 46.7 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 39/263 (14%), Positives = 76/263 (28%), Gaps = 38/263 (14%)

Query: 29  NPDIICLQETKTEDKN-FP--FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPG 85
           N DII +QE + + +N  P   E +   +Y+ +    +         +Y  I     +  
Sbjct: 92  NYDIIAIQEIRDKSENSLPQLVELVNEGDYNYDFVMSERLGRTVSKEQYAYIYNTATVDI 151

Query: 86  DDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELE 145
            +        E T   + Q   I +    +GN   +                A   +   
Sbjct: 152 SNNPHTYPEPEGTDPFHRQP-YIASFEAVNGNFDATFITVHTDPDEATEEINALDSVVEY 210

Query: 146 EPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY 205
               ++ + + I       +   ++ D   T+     +  + +         T      Y
Sbjct: 211 THEKYSEERDFIVMGDLNADGSYFDEDLDSTMHNDYYYWCIGDD------IDTTTGSTDY 264

Query: 206 SFWDYYADSWSKNKGIRIDHIMLS-PEATSLLHSARIDT-KPRGWTKP------SDHTPV 257
           ++                D I+++ P        A I     +   K       SDH PV
Sbjct: 265 TY----------------DRIIITEPAMEDFTDDAHIYRYDDKYDLKHDETMDVSDHYPV 308

Query: 258 IVSLDIPEPRKKQQDSTSQNMKP 280
             +        K  D+ + N  P
Sbjct: 309 YATF----WTNKDDDNITSNYTP 327


>gi|330831230|ref|YP_004394182.1| putative phospholipase C [Aeromonas veronii B565]
 gi|328806366|gb|AEB51565.1| Putative phospholipase C [Aeromonas veronii B565]
          Length = 438

 Score = 46.7 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 40/278 (14%), Positives = 83/278 (29%), Gaps = 43/278 (15%)

Query: 4   VTVATWNVN-------SIRARIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNY 55
           + VA++NV        SI  R+  L  ++K  +   + LQE      + F     +   Y
Sbjct: 174 LKVASYNVWALPVIASSIGERLTLLPDYLKGYDA--LLLQEVFDGRREGFLQALAKEYPY 231

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
             +   +   N       +    ++        + Q  + + T T       +    +  
Sbjct: 232 QTKVLDKPGIN------VHDGGVVIVSRYPIVREAQLVYPQCTGTDCFADKGVMYAEVIK 285

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
           G       +    +          ++++  +    A    I       Y      N   F
Sbjct: 286 GG-KAWHLFATHTASFDTDEARKLRQIQFGQIRSLAASLKIPATDTVIYGGDFNVNKRKF 344

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYS--FWDYYADSWS-------KNKGIRIDHI 226
             +                + A    +  Y+   +D   + ++        N    +D++
Sbjct: 345 ADDY---------ANMLANLNAHEPAYGGYTEATFDPRINPYAGGPLSGGANVEY-LDYL 394

Query: 227 MLSP---EATSLLHSARIDTKPRGWTKP----SDHTPV 257
           ++S     A+  L++  I     G   P    SDH PV
Sbjct: 395 VVSREYGNASHNLNTVWIPRSSDGSLWPASNLSDHFPV 432


>gi|317156331|ref|XP_003190713.1| reverse transcriptase [Aspergillus oryzae RIB40]
 gi|317159444|ref|XP_003191071.1| reverse transcriptase [Aspergillus oryzae RIB40]
          Length = 1679

 Score = 46.7 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 14/42 (33%), Gaps = 4/42 (9%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
           ID ++ S      +    I     G    SDH  +    D P
Sbjct: 632 IDLVLASENLADSVIKCAIL----GTEHGSDHCAIETVFDAP 669


>gi|317156047|ref|XP_001825109.2| reverse transcriptase [Aspergillus oryzae RIB40]
          Length = 1779

 Score = 46.7 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 14/42 (33%), Gaps = 4/42 (9%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
           ID ++ S      +    I     G    SDH  +    D P
Sbjct: 732 IDLVLASENLADSVIKCAIL----GTEHGSDHCAIETVFDAP 769


>gi|317148708|ref|XP_003190229.1| reverse transcriptase [Aspergillus oryzae RIB40]
          Length = 1646

 Score = 46.7 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 14/42 (33%), Gaps = 4/42 (9%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
           ID ++ S      +    I     G    SDH  +    D P
Sbjct: 632 IDLVLASENLADSVIKCAIL----GTEHGSDHCAIETVFDAP 669


>gi|317147694|ref|XP_003189943.1| reverse transcriptase [Aspergillus oryzae RIB40]
 gi|317159428|ref|XP_001827307.2| reverse transcriptase [Aspergillus oryzae RIB40]
 gi|317159432|ref|XP_001827309.2| reverse transcriptase [Aspergillus oryzae RIB40]
          Length = 1676

 Score = 46.7 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 14/42 (33%), Gaps = 4/42 (9%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
           ID ++ S      +    I     G    SDH  +    D P
Sbjct: 629 IDLVLASENLADSVIKCAIL----GTEHGSDHCAIETVFDAP 666


>gi|317141336|ref|XP_003189359.1| reverse transcriptase [Aspergillus oryzae RIB40]
          Length = 1679

 Score = 46.7 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 14/42 (33%), Gaps = 4/42 (9%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
           ID ++ S      +    I     G    SDH  +    D P
Sbjct: 632 IDLVLASENLADSVIKCAIL----GTEHGSDHCAIETVFDAP 669


>gi|83773851|dbj|BAE63976.1| unnamed protein product [Aspergillus oryzae]
 gi|83776055|dbj|BAE66174.1| unnamed protein product [Aspergillus oryzae]
 gi|83776057|dbj|BAE66176.1| unnamed protein product [Aspergillus oryzae]
          Length = 1255

 Score = 46.7 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 14/42 (33%), Gaps = 4/42 (9%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
           ID ++ S      +    I     G    SDH  +    D P
Sbjct: 208 IDLVLASENLADSVIKCAIL----GTEHGSDHCAIETVFDAP 245


>gi|149369902|ref|ZP_01889753.1| hypothetical protein SCB49_02474 [unidentified eubacterium SCB49]
 gi|149356393|gb|EDM44949.1| hypothetical protein SCB49_02474 [unidentified eubacterium SCB49]
          Length = 308

 Score = 46.7 bits (109), Expect = 0.004,   Method: Composition-based stats.
 Identities = 35/278 (12%), Positives = 73/278 (26%), Gaps = 50/278 (17%)

Query: 6   VATWNVNSIR--------ARIHNLAAWIKENNPDIICLQET------------KTEDKNF 45
           + +WN   IR          I  +A  +K  + DI+ +QE             K      
Sbjct: 60  IISWN---IRDFGQSKNDTEIKAIATIVK--DFDIVLIQEVVAKHPGGAQAVAKL-ADQL 113

Query: 46  PFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT 105
                   +Y I    +     ++    Y        L G     +              
Sbjct: 114 NR-MGSKWDYSISDPTKSPSAYMSERYAYLWKTARVSLKGKPFLDKELSSLVYREPYIAH 172

Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165
                   P       ++  D     +        +    + ++  GD+N+        +
Sbjct: 173 FLFKGTSKPIAVINYHSRKHDDHPENEIQHFLDYNKRLKTDNILLCGDFNLNEAHPVWNS 232

Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225
                     +        K ++  + +     H   ++Y                + D 
Sbjct: 233 FYDNGYKNAISNTPTTLKMKCKDGNYLN-----HSIDNMY---------------WQGDF 272

Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            + S  +   +      TK R   + SDH PV ++ ++
Sbjct: 273 TITSAGSLDFIQKCENLTKAR---QLSDHLPVSINFNL 307


>gi|148985891|ref|ZP_01818985.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae SP3-BS71]
 gi|147922037|gb|EDK73161.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae SP3-BS71]
 gi|301799776|emb|CBW32345.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae OXC141]
          Length = 271

 Score = 46.3 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/264 (11%), Positives = 70/264 (26%), Gaps = 14/264 (5%)

Query: 4   VTVATWNVNSI--RARIHNL---AAWIKENNPDIICLQETK-------TEDKNFPFETLQ 51
           +   T N +S   +            I E + D+IC QE          E  +       
Sbjct: 1   MKFLTLNTHSWMEKEAEEKFQILLEDILEKDYDLICFQEINQEMTSSEVEVNDLYQALPA 60

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
           +   H +   +     ++   K        +  G D   +   I +   I  + + + ++
Sbjct: 61  AEPIHQDHYVRLLVEKLSEQGKNYYWTWAYNHIGYDRYHEGVAILSKTPIEAREILVSDV 120

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
             P           + +   K     +      ++                    ++  +
Sbjct: 121 DDPTDYHTRRVALAETVVDGKELAVASVHLSWWDKGFQEEWARFEAVLKKLNKPLLLAGD 180

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
                 +          +G  DA     +    Y+            + +RID++  + E
Sbjct: 181 FNNPAGQEGYQAILASPLGLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTTKE 240

Query: 232 ATSLLHSARIDTKPRGWTKPSDHT 255
               + +  +        + SDH 
Sbjct: 241 LA--VENLHVVFDGNKSPQVSDHY 262


>gi|308484753|ref|XP_003104576.1| hypothetical protein CRE_23497 [Caenorhabditis remanei]
 gi|308257776|gb|EFP01729.1| hypothetical protein CRE_23497 [Caenorhabditis remanei]
          Length = 968

 Score = 46.3 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 43/280 (15%), Positives = 89/280 (31%), Gaps = 25/280 (8%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENN---PDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           + + T+N  S+ A  + LA  ++E N    DII L ETK   +                 
Sbjct: 21  LRICTFNCRSV-ATDNRLAELLEETNRIKYDIIGLSETKRSAE-VHMTNRDGTG---VIL 75

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           G+++ + V+    +   + +     +   V  R    T  +N     I   Y P  +   
Sbjct: 76  GKRNDSSVSGGVGFIINKSLMPKIKEIKIVSHRIGYLTLQVNKNQYTIIQGYAPTADYEE 135

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
               +   +    +    S+   +              +     + +   ND+   L   
Sbjct: 136 EEHSNFYENLEDVYKSCKSRYKMVIGDFNARIGERKGNEVFIGPHSMENRNDSGERL--- 192

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            +     N  F    +    TH  +++         +     +DHI+ +      +    
Sbjct: 193 -ATFCEVNKVFHMNSQFIKPTHRRWTYISPDKQHRHE-----LDHILANG---KYITDVS 243

Query: 241 IDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
           +      +T  SDH  +  ++ I   + K +    +  KP
Sbjct: 244 V---VPSFTNGSDHRMLRANVHINAKQAKFEQV--KRRKP 278


>gi|313625229|gb|EFR95070.1| endonuclease/exonuclease/phosphatase family protein [Listeria
           innocua FSL J1-023]
          Length = 256

 Score = 46.3 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 2/49 (4%)

Query: 215 WSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             +N+  +ID+I +S E    + S +  T        SDH PV  +L+ 
Sbjct: 209 RPENELEKIDYIFVSKEL--RVCSYKTITDQVDGCSASDHFPVTATLEW 255


>gi|241626053|ref|XP_002409605.1| conserved hypothetical protein [Ixodes scapularis]
 gi|215503194|gb|EEC12688.1| conserved hypothetical protein [Ixodes scapularis]
          Length = 383

 Score = 46.3 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 24/54 (44%), Gaps = 10/54 (18%)

Query: 3   VVTVATWNVNSIR-----ARIHNLAAWIKENNPDIICLQE-----TKTEDKNFP 46
            +   TWN++ I       R   + + I+ +  D++ LQE      K  +++ P
Sbjct: 133 TLKFITWNIDGIDDKNLLLRTKAVCSIIESSGIDVVFLQEVVPTSVKVMEQSLP 186


>gi|87116463|dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
          Length = 1898

 Score = 46.3 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 37/285 (12%), Positives = 83/285 (29%), Gaps = 46/285 (16%)

Query: 3   VVTVATWNVNSI-RARIHNLA-AWIKENNPDIICLQETKTE--DKNFPFETLQSLNYHIE 58
           ++ + +WN   I  +R+       +     D +CL E ++   +K     +   L  H  
Sbjct: 532 LMRILSWNCRGIANSRVRRFVKDLLSTTKADALCLLEIRSSKAEKMIALASRLGLTNHFI 591

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
                   G+ +L K      V       +   A        I    +R           
Sbjct: 592 VNPLGFAGGLLLLWKPALNLSVISHNSQAIHTLASHRLGNCFITFAYIR----------- 640

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
                  +  +    +         ++ P +  GD N I    + +        +     
Sbjct: 641 ------PNTFAKCGFWEYCKQLANSIQSPWMVVGDLNDIATSDEQWGSSSLNYTSLQNFV 694

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM--LSPEATSLL 236
              S   L + G +            +++  +  +   + +  R+D ++  +S + T   
Sbjct: 695 DAYSDCGLLDPGSSGP---------NFTWCRFIGNRVVQRR--RLDRVLWNVSAQLTFPE 743

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
               +          SDH P++    + E       S    ++P+
Sbjct: 744 AKVSVLP-----RLCSDHNPILF---LDEAGNPPDRS----LRPV 776


>gi|16799425|ref|NP_469693.1| hypothetical protein lin0348 [Listeria innocua Clip11262]
 gi|16412777|emb|CAC95581.1| lin0348 [Listeria innocua Clip11262]
          Length = 257

 Score = 46.3 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 2/49 (4%)

Query: 215 WSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             +N+  +ID+I +S E    +HS +  T        SDH PV  +L+ 
Sbjct: 210 RPENELEKIDYIFVSKEF--RVHSYKTITDQVDGCSASDHFPVTATLEW 256


>gi|212547169|ref|XP_002153737.1| reverse transcriptase, putative [Penicillium marneffei ATCC 18224]
 gi|210064393|gb|EEA18490.1| reverse transcriptase, putative [Penicillium marneffei ATCC 18224]
          Length = 1703

 Score = 46.3 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 20/58 (34%), Gaps = 4/58 (6%)

Query: 209 DYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEP 266
            +       +    ID ++ S   T  +    I     G    SDH  +   LD+P P
Sbjct: 642 TWQGRGQDGDYESTIDLVLASENLTDSMVKCAIH----GTEHGSDHRAIETVLDVPRP 695


>gi|126699766|ref|YP_001088663.1| putative endonuclease/exonuclease/phosphatase [Clostridium
          difficile 630]
 gi|254975745|ref|ZP_05272217.1| putative endonuclease/exonuclease/phosphatase [Clostridium
          difficile QCD-66c26]
 gi|255093132|ref|ZP_05322610.1| putative endonuclease/exonuclease/phosphatase [Clostridium
          difficile CIP 107932]
 gi|255307161|ref|ZP_05351332.1| putative endonuclease/exonuclease/phosphatase [Clostridium
          difficile ATCC 43255]
 gi|255314874|ref|ZP_05356457.1| putative endonuclease/exonuclease/phosphatase [Clostridium
          difficile QCD-76w55]
 gi|255517548|ref|ZP_05385224.1| putative endonuclease/exonuclease/phosphatase [Clostridium
          difficile QCD-97b34]
 gi|255650659|ref|ZP_05397561.1| putative endonuclease/exonuclease/phosphatase [Clostridium
          difficile QCD-37x79]
 gi|260683749|ref|YP_003215034.1| putative endonuclease/exonuclease/phosphatase [Clostridium
          difficile CD196]
 gi|260687409|ref|YP_003218543.1| putative endonuclease/exonuclease/phosphatase [Clostridium
          difficile R20291]
 gi|306520587|ref|ZP_07406934.1| putative endonuclease/exonuclease/phosphatase [Clostridium
          difficile QCD-32g58]
 gi|115251203|emb|CAJ69034.1| putative endonuclease/exonuclease/phosphatase [Clostridium
          difficile]
 gi|260209912|emb|CBA63862.1| putative endonuclease/exonuclease/phosphatase [Clostridium
          difficile CD196]
 gi|260213426|emb|CBE05082.1| putative endonuclease/exonuclease/phosphatase [Clostridium
          difficile R20291]
          Length = 209

 Score = 46.3 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 9/42 (21%)

Query: 4  VTVATWNV-------NSIRARIHNLAAWIKENNPDIICLQET 38
          + + T+N+       N  R  +  +  ++K+ + D+ICLQE 
Sbjct: 1  MKIVTYNIHKGMDSNN--RLTLTKMGLYLKQLDCDVICLQEV 40


>gi|77917626|ref|YP_355441.1| hypothetical protein Pcar_0008 [Pelobacter carbinolicus DSM 2380]
 gi|77543709|gb|ABA87271.1| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380]
          Length = 244

 Score = 46.3 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 35/277 (12%), Positives = 78/277 (28%), Gaps = 61/277 (22%)

Query: 1   MSVVTVATWNVNSIR--------ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52
           M  + + T+N++  R        ARI      I    PD++ LQE      +   +    
Sbjct: 1   MYTIRIMTYNIHGCRGTDGRTDPARI---LEVISRAGPDMVALQEV---AGSLDNDQAAW 54

Query: 53  LNYHIETCGQKSYN--GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
           L   +        +  G A LS Y    +          + A    A   ++   +R+  
Sbjct: 55  LGQRLAMNYYGPDSPGGNAFLSYYPMRAMRYLDLEGGSCLCADINIAGRCLHIFNIRLHE 114

Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170
            +          +   +        +          P++  GD+   P            
Sbjct: 115 HF----------RQRRRQWVRLFDPQDGVGSHSTGCPVMLLGDFGDGPW----------- 153

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230
             +     +  + +  ++  ++    +                          D   L  
Sbjct: 154 --SLRHGSIAPALRLAKSPFWSSTFPSWLPLCSR-------------------DRAYLGG 192

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPR 267
           +    +  +RI        + S H P++ ++ + +PR
Sbjct: 193 QL--RIVDSRIYRYATAR-RASTHLPLLFTVRVADPR 226


>gi|15902713|ref|NP_358263.1| hypothetical protein spr0669 [Streptococcus pneumoniae R6]
 gi|116516071|ref|YP_816156.1| hypothetical protein SPD_0662 [Streptococcus pneumoniae D39]
 gi|303255826|ref|ZP_07341867.1| hypothetical protein CGSSpBS455_10054 [Streptococcus pneumoniae
           BS455]
 gi|303266291|ref|ZP_07352182.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae BS457]
 gi|15458256|gb|AAK99473.1| Hypothetical protein spr0669 [Streptococcus pneumoniae R6]
 gi|116076647|gb|ABJ54367.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae D39]
 gi|301801606|emb|CBW34304.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae INV200]
 gi|302597210|gb|EFL64315.1| hypothetical protein CGSSpBS455_10054 [Streptococcus pneumoniae
           BS455]
 gi|302644221|gb|EFL74477.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae BS457]
          Length = 271

 Score = 46.3 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/264 (11%), Positives = 71/264 (26%), Gaps = 14/264 (5%)

Query: 4   VTVATWNVNSI--RARIHNL---AAWIKENNPDIICLQETK-------TEDKNFPFETLQ 51
           +   T N +S   +            I E + D+IC QE          E  +       
Sbjct: 1   MKFLTLNTHSWMEKEAEEKFQILLEDILEKDYDLICFQEINQEMTSSEVEVNDLYQALPA 60

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
           +   H +   +     ++   K        +  G D   +   I +   I  + + + ++
Sbjct: 61  AEPIHQDHYVRLLVEKLSEQGKNYYWTWAYNHIGYDRYHEGVAILSKTPIEAREILVSDV 120

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
             P           + +   K     +      ++          +         ++  +
Sbjct: 121 DDPTDYHTRRVALAETVVDGKELAVASVHLSWWDKGFQEEWARFEVVLKKLNKPLLLAGD 180

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
                 +          +G  DA     +    Y+            + +RID++  + E
Sbjct: 181 FNNPAGQEGYQAILASPLGLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTTKE 240

Query: 232 ATSLLHSARIDTKPRGWTKPSDHT 255
               + +  +        + SDH 
Sbjct: 241 LA--VENLHVVFDGNKSPQVSDHY 262


>gi|307325474|ref|ZP_07604676.1| Endonuclease/exonuclease/phosphatase [Streptomyces violaceusniger
           Tu 4113]
 gi|306888943|gb|EFN19927.1| Endonuclease/exonuclease/phosphatase [Streptomyces violaceusniger
           Tu 4113]
          Length = 286

 Score = 46.3 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 38/278 (13%), Positives = 83/278 (29%), Gaps = 43/278 (15%)

Query: 4   VTVATWNVN-SIRAR----IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           + VAT+N++          +  +A  I++   D+I LQE                 Y   
Sbjct: 41  LRVATFNIHHGAGPADVLDLERVARVIEDLRVDVIGLQEV--------------DRYWKR 86

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL------Y 112
           +        +A     Q           +   + R    T  ++   +R           
Sbjct: 87  SGFVDQPAWLAERLGMQHAFGANLDLDPEEPGRPRRQYGTAVLSRGPIRSWTNTHLPLVP 146

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                 +     D + + ++  +         E     A    ++    +    +   N 
Sbjct: 147 GHEQRGLLQATLDVRGTCVEFAVTHLQHDDNKERERQAARIVELLGSSPEHTVLVGDLNA 206

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
              T E+      L ++           +   +++        + +   RID  + S + 
Sbjct: 207 TPETPEIGILTGALDDVW------PRAGSGDGFTY-------DALDPHARIDFHLASRDL 253

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQ 270
             L  +A++        + SDH PV+  L +P  R ++
Sbjct: 254 GPL--TAQV---VTADPEASDHLPVVSDLRMPVRRHRR 286


>gi|301793919|emb|CBW36315.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae INV104]
          Length = 271

 Score = 46.3 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/264 (11%), Positives = 69/264 (26%), Gaps = 14/264 (5%)

Query: 4   VTVATWNVNSI--RARIHNL---AAWIKENNPDIICLQETK-------TEDKNFPFETLQ 51
           +   T N +S   +            I E + D+IC QE          E  +       
Sbjct: 1   MKFLTLNTHSWMEKEAEEKFQILLEDILEKDYDLICFQEINQEMTSSEVEVNDLYQALPA 60

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
           +   H +   +     +    K        +  G D   +   I +   I  + + + ++
Sbjct: 61  AEPIHQDHYVRLLVEKLLEQGKNYYWTWAYNHIGYDRYHEGVAILSKTPIEAREILVSDV 120

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
             P           + +   K     +      ++                    ++  +
Sbjct: 121 DDPTDYHTRRVALAETLVDGKELAVASVHLSWWDKGFQEEWARFEAVLKKLNKPLLLAGD 180

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
                 +          +G  DA     +    Y+            + +RID++  + E
Sbjct: 181 FNNPAGQEGYQAILASPLGLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTTKE 240

Query: 232 ATSLLHSARIDTKPRGWTKPSDHT 255
               + +  +        + SDH 
Sbjct: 241 LA--VENLHVVFDGNKSPQVSDHY 262


>gi|225432458|ref|XP_002277228.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 486

 Score = 46.3 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 36/252 (14%), Positives = 72/252 (28%), Gaps = 27/252 (10%)

Query: 13  SIRARIHNLAAWIKENNPDIICLQETKTEDKN--FPFETLQS-LNY-HIETCGQKSYNGV 68
            +R+   ++   ++E N DI+ LQ+ K E++    P   L   L   ++         G 
Sbjct: 208 GLRSS-RSILEVLREVNADILALQDVKAEEEKGMKPLSDLAGALGMKYVFAESWAPEFGN 266

Query: 69  AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKI 128
           AILSK+           D  D +              +      L H +     K  + I
Sbjct: 267 AILSKWPIKRWKAQKIIDGEDFRNVLKATIDVPWAGEVNFHCTQLDHLDENWRMKQTNAI 326

Query: 129 SWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN 188
                     +  L       ++ +        D              ++V +  +  + 
Sbjct: 327 IQSSDCPHILAGGLNSLNGSDYSRER-----WMDIIKYYEEIGKPTPKVDVMEFLKGKEY 381

Query: 189 MGFTDAIRATHDTHHLYSFWDYYADSWSKN------KGIRIDHIMLSPEATSLLHSARID 242
           +   +          +         +  +N       G R+D+I+ S ++          
Sbjct: 382 VDAKNFAGECEPVVII---------AKGQNVQGTCKYGTRVDYILASQDSPYKFVPRS-- 430

Query: 243 TKPRGWTKPSDH 254
                    SDH
Sbjct: 431 YSVISSKGTSDH 442


>gi|160891511|ref|ZP_02072514.1| hypothetical protein BACUNI_03962 [Bacteroides uniformis ATCC 8492]
 gi|156858918|gb|EDO52349.1| hypothetical protein BACUNI_03962 [Bacteroides uniformis ATCC 8492]
          Length = 283

 Score = 46.3 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 42/271 (15%), Positives = 78/271 (28%), Gaps = 30/271 (11%)

Query: 6   VATWNV---------NSIRARIHNLAAWIKENNPDIICLQE-TKTEDKNFPFETLQS--L 53
           V ++N+         N+ + R  + A  I    PDII +QE  K +  +      Q   L
Sbjct: 30  VMSFNIRLDHVADSMNNWKYRKDHAAQMIAYYAPDIIGMQEVVKNQLDDLKERLPQYTAL 89

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
                   +K           +   + +   G      +   +       + +    +  
Sbjct: 90  GVGRADGEEKGEYCSLFYKTDRFELLKSGNFGLSETPDSIGKKGWDAACERIVT-WAVLK 148

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
              +      ++     + +  R  S  L LE+    AG                +    
Sbjct: 149 DKVSGREIAAFNTHFDHVGKVARRESAVLILEKIKQMAG-------DLPVIVTRDFNGTV 201

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR-IDHIMLSPEA 232
                   +   ++N   T  +            W ++       +  R ID I +   A
Sbjct: 202 DSEPVTVLTEGGMKNACVTAKVAYGPT-------WSFHDFGRIPVEKRRLIDFIFI-KGA 253

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             +     ID KP      SDH PV+  L +
Sbjct: 254 VEVERYRTIDDKP-DNGYLSDHAPVMAILKL 283


>gi|189242139|ref|XP_001814281.1| PREDICTED: similar to endonuclease and reverse transcriptase-like
           protein [Tribolium castaneum]
          Length = 1308

 Score = 46.3 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 18/38 (47%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTED 42
            VA WN N + A    L  ++     DI+ + ETK + 
Sbjct: 451 RVAFWNANGLLAARDELEEFVDRLQLDIVLVCETKLQP 488


>gi|85375599|ref|YP_459661.1| metal-dependent hydrolase [Erythrobacter litoralis HTCC2594]
 gi|84788682|gb|ABC64864.1| metal-dependent hydrolase [Erythrobacter litoralis HTCC2594]
          Length = 233

 Score = 46.3 bits (108), Expect = 0.004,   Method: Composition-based stats.
 Identities = 36/275 (13%), Positives = 78/275 (28%), Gaps = 62/275 (22%)

Query: 4   VTVATWNVNSIRA-----RIH--NLAAWIKENNPDIICLQETKTEDKN----FPFETLQS 52
           +TVA++N++  +A     R     + + ++E + DII LQE            P   L  
Sbjct: 3   LTVASYNIH--KAVGTDRRRDPARIVSVLRELDADIIALQEADLRFGQRASVLPRALLDD 60

Query: 53  LNYHIETCGQKS----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108
             +      ++     ++G A+L +     + +      +        A         R+
Sbjct: 61  TPWKAVAVAKRPRSLGWHGNALLVRRGMEIVDSEALDLPMLEPRGAACADIANGKGAFRV 120

Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168
              +L       S +    ++ + R      + L  +          +            
Sbjct: 121 VGTHLDLSGVRRSDQIRTILAHLHRAHPDMPEILMGDFNQWSVRSGAMRVFD-------- 172

Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
                                   +  +         SF      +       R+D I L
Sbjct: 173 ------------------------EKWQVLSPGP---SFPSRRPIA-------RLDRIAL 198

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           SP+    +    +        + SDH P+  ++ +
Sbjct: 199 SPQW--QVVGQGVHHSALSA-QASDHLPIWATVRL 230


>gi|326918342|ref|XP_003205448.1| PREDICTED: nocturnin-like [Meleagris gallopavo]
          Length = 379

 Score = 46.3 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 35/264 (13%), Positives = 71/264 (26%), Gaps = 28/264 (10%)

Query: 21  LAAWIKENNPDIICLQETKTEDKNFP--FETLQSLNYHIETCGQKSYNGVAILSKYQPIE 78
           +   I    PDI+CLQE    D  F      L  L Y      +         S    +E
Sbjct: 127 ILEEILAYKPDILCLQEV---DHYFDTFEPLLSRLGYQCTFFPKP-------WSPCLDVE 176

Query: 79  IVTHLPGDDLDVQARFIEATFT--INTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
                 G  L       E   +  I    +++    +     +  ++           L+
Sbjct: 177 QNNGPDGCALFFLKERFELINSANIRLTAMKLKTNQVAIAQTLKCSETGRLFCIAVTHLK 236

Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN----MGFT 192
             +               N+         P+I   D           +   +        
Sbjct: 237 ARTGWERFRSAQGCDLLQNLKSITQGAKIPLIICGDFNAEPTEEVYREFSNSSLNLNSAY 296

Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR------ 246
             +     +   Y+ W        ++    +D+I  S  A ++  +  + T+ +      
Sbjct: 297 KLLSPDGQSEPPYTTWKIRPSGECRHT---LDYIWYSQHALNVNSALGLLTEEQIGPNRL 353

Query: 247 -GWTKPSDHTPVIVSLDIPEPRKK 269
             +  PSDH  ++      +   +
Sbjct: 354 PSFNYPSDHLSLVCDFSFNQDPDR 377


>gi|261315552|ref|ZP_05954749.1| endonuclease/exonuclease/phosphatase [Brucella pinnipedialis
           M163/99/10]
 gi|261317992|ref|ZP_05957189.1| endonuclease/exonuclease/phosphatase [Brucella pinnipedialis B2/94]
 gi|261758554|ref|ZP_06002263.1| endonuclease/exonuclease/phosphatase family [Brucella sp. F5/99]
 gi|265989022|ref|ZP_06101579.1| endonuclease/exonuclease/phosphatase [Brucella pinnipedialis
           M292/94/1]
 gi|261297215|gb|EEY00712.1| endonuclease/exonuclease/phosphatase [Brucella pinnipedialis B2/94]
 gi|261304578|gb|EEY08075.1| endonuclease/exonuclease/phosphatase [Brucella pinnipedialis
           M163/99/10]
 gi|261738538|gb|EEY26534.1| endonuclease/exonuclease/phosphatase family [Brucella sp. F5/99]
 gi|264661219|gb|EEZ31480.1| endonuclease/exonuclease/phosphatase [Brucella pinnipedialis
           M292/94/1]
          Length = 217

 Score = 46.3 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 46/141 (32%), Gaps = 24/141 (17%)

Query: 145 EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL 204
           E   +  GD+N   +            +    +E   +   L   GF   +         
Sbjct: 78  ERRWLICGDFNDYRERILIGGDEWNGYEFTPVMEEESALNVLLGDGFAVNLVERRPVMDR 137

Query: 205 YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA-------------------RIDTKP 245
           ++ +             ++D+IM SP   +    A                    +D  P
Sbjct: 138 WTLYHTRGPLER--HLCQLDYIMASPAFAAKNEHAVPDIIRRGQPWRTIFPPEQNVDRYP 195

Query: 246 R-GWTKP--SDHTPVIVSLDI 263
           R GW +P  SDH PV V+L++
Sbjct: 196 RTGWDRPKASDHCPVSVTLNM 216


>gi|291457367|ref|ZP_06596757.1| hypothetical protein BIFBRE_04610 [Bifidobacterium breve DSM 20213]
 gi|291381202|gb|EFE88720.1| hypothetical protein BIFBRE_04610 [Bifidobacterium breve DSM 20213]
          Length = 317

 Score = 46.3 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 34/262 (12%), Positives = 69/262 (26%), Gaps = 45/262 (17%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTED--KNFPFETLQSLNYHIETCGQ 62
            V T+NV   +A   ++   +++   +++ LQET T+D  K      ++    +      
Sbjct: 97  RVMTFNVYKGQADAQSIVNLVRDQRVEVLALQET-TDDFVKQLTEAGIEHYLPYAHVSSS 155

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
               G  + S     ++V                       + + +       G      
Sbjct: 156 DGVYGNGLWSAAPLKDVVDDEVNSSASFMPSGTVDMGGNQIRFVSVHTTAPVPG------ 209

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                  W +        R   +   IF GD+N           +               
Sbjct: 210 ---YWGQWKRSLDELGLMRSHTDARYIFMGDFNATYDHTPFREFLGN------------- 253

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA-TSLLHSARI 241
                                 +S+    +       G  IDH++L           A+I
Sbjct: 254 --------RFVDAAHQSGHGFTFSWPTNRSYL-PTFAG--IDHVVLDTGMTAGQCQIAKI 302

Query: 242 DTKPRGWTKPSDHTPVIVSLDI 263
                     SDH  ++ ++ +
Sbjct: 303 --------AGSDHAALLATISV 316


>gi|153832474|ref|ZP_01985141.1| endonuclease/exonuclease/phosphatase [Vibrio harveyi HY01]
 gi|148871269|gb|EDL70141.1| endonuclease/exonuclease/phosphatase [Vibrio harveyi HY01]
          Length = 442

 Score = 46.3 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 38/283 (13%), Positives = 82/283 (28%), Gaps = 43/283 (15%)

Query: 4   VTVATWNVNSIRA-------RIHNLAAWIKENNPDIICLQETKTE-DKNFPFETLQSLNY 55
           + + T+N+ ++ A       R   +  ++K    D++ LQE   +  + F  E  +   Y
Sbjct: 178 LKLVTYNIWALPAVASHIGDRYELIPEYVK--GYDVVALQEVFADGREAFLRELAEEYPY 235

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
             +   +  +N             + +         +               I    +  
Sbjct: 236 QTKMLDKDGFNIHDGGVTIVSRYPIVNQAQYVFPDCSSTDCFADKG------INYAEIIK 289

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
           G       +    +     +    ++ + ++    A   NI       Y+     N    
Sbjct: 290 GGQA-YHVFATHAASSDTEIAREHRQRQFKQMRAMAKSLNIPANETVVYSGDFNVNK--- 345

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYS--FWDYYADSWS-------KNKGIRIDHI 226
                              + A    +  Y+   +D   ++++        N    +D++
Sbjct: 346 ------LKFPGDYQQMIANLSAVEPEYSGYTASTFDPRINNFAGKALSGGDNVEY-LDYV 398

Query: 227 MLSPEA-TSLLHSARID----TKPRGWTK--PSDHTPVIVSLD 262
           M+S E      +  R+D    T    W     SDH PV   L 
Sbjct: 399 MVSSEYGAKSFNDNRVDVPRSTAASLWKHYNLSDHFPVSTVLK 441


>gi|103486507|ref|YP_616068.1| endonuclease/exonuclease/phosphatase [Sphingopyxis alaskensis
           RB2256]
 gi|98976584|gb|ABF52735.1| Endonuclease/exonuclease/phosphatase [Sphingopyxis alaskensis
           RB2256]
          Length = 289

 Score = 46.3 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/266 (12%), Positives = 71/266 (26%), Gaps = 21/266 (7%)

Query: 7   ATWNV------NSIRARIHN---LAAWIKENNPDIICLQETKTEDKN-FPFETLQSLNYH 56
            T+N+      +   A  H    +   +   +PD+I +QE     K     +  + +   
Sbjct: 28  MTYNIRLDLASDGDNAWPHRRGAVTNLVGYYSPDLIGMQEVLLHQKQAIEADLPRYIFVG 87

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
           +     K     + L   +    +       L          +      +          
Sbjct: 88  VARDDGKEQGEFSPLGFRRDRFTLVASGTFWLSPTPDAPSRGWDAALPRIASWARLKDRS 147

Query: 117 NPITSTKYD-DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
           + +T    +       K     ++++L             ++             +DA  
Sbjct: 148 SRLTLLAVNTHFDHVGKEARLESARQLRRWIGANRRRGETVVLMGDFNSPVDSPPHDAIT 207

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
                 +           +          ++ +D       +N    IDHI ++      
Sbjct: 208 DPAPGPAALH---DTLAISRTPHFGPLGTFTGFD-----IERNDPSPIDHIFVNDGTA-- 257

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
           +      T+  G   PSDH PV+  L
Sbjct: 258 VLRHATLTQQTGGKLPSDHYPVLADL 283


>gi|147845367|emb|CAN79050.1| hypothetical protein VITISV_004869 [Vitis vinifera]
          Length = 1429

 Score = 46.3 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 22/40 (55%), Gaps = 2/40 (5%)

Query: 4   VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTE 41
           V + +WNV      ++   +  +I+    D++C+QETK +
Sbjct: 434 VKILSWNVRGANDSSKRKVIKTFIRNQRVDLMCIQETKLQ 473


>gi|209560115|ref|YP_002286587.1| hypothetical protein Spy49_1635c [Streptococcus pyogenes NZ131]
 gi|209541316|gb|ACI61892.1| hypothetical protein Spy49_1635c [Streptococcus pyogenes NZ131]
          Length = 272

 Score = 46.3 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 37/276 (13%), Positives = 86/276 (31%), Gaps = 20/276 (7%)

Query: 3   VVTVATWNVNSIRAR--IHNLAAW---IKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57
           +  V T N +S      +  L A    I     DIICLQE    ++    E    L  + 
Sbjct: 1   MTKVLTLNTHSWMQANTLKKLVALAEHILAEKYDIICLQEI---NQLIESELATDLPRYQ 57

Query: 58  E-----TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
                 +  +  +  + I    +  +        +      + E    ++ Q + + ++ 
Sbjct: 58  ALSGTPSIHKDHFALLLIHYLQKRGQHYYWSWAYNHIGYDIYQEGVAILSKQPIHVSDIL 117

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLI---FAGDYNIIPQPHDCYNPIIW 169
           +   +  T       +             + +        F G++  + +     N  + 
Sbjct: 118 VSAMDDETDYHTRRSLIAKTTLDGKEVAVVNVHLSWFDKGFLGEWEKLEKELLTLNCALL 177

Query: 170 ENDACFTLEVRQSFQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227
                     +  +Q +    +   D+ +        +S            + +++DH+ 
Sbjct: 178 LMGDFNNPTDQDGYQVMMGSPLDLQDSHKVADHVFGDHSIVADIDGWQDNKEALKVDHVF 237

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            S +    + S++I  +       SDH  + V+LD 
Sbjct: 238 TSKDFI--IRSSKITFEGGDAPVVSDHYGLEVTLDW 271


>gi|168209037|ref|ZP_02634662.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens B str. ATCC 3626]
 gi|170712739|gb|EDT24921.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens B str. ATCC 3626]
          Length = 263

 Score = 46.3 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 37/269 (13%), Positives = 74/269 (27%), Gaps = 20/269 (7%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQE----TKTEDKNFPFETLQSLN 54
           + + T N +S        +I  LA  I E   D+I LQE     K          L+  N
Sbjct: 1   MKLLTLNCHSWLEEEQLYKIKYLAKTIVEEKYDVIALQEASQSIKAS---IKEGNLKEDN 57

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           Y +    +          +Y  +   +H+  D  +     +     +N+++  I   +  
Sbjct: 58  YGLILIEEIKK---LGGEEYHLVWDYSHIGYDIYEEGLCILTKHKVVNSESFYISKSHSK 114

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
                            +    ++       +              H   +         
Sbjct: 115 TFWRSRKIVKATIDINNENIDFYSCHMGWWHDKEESFTFQVKNLIAHAKESKNRAFFMGD 174

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD--SWSKNKG-IRIDHIMLSPE 231
           F        +    +     I       +  S      +   W  N G +RID I  +  
Sbjct: 175 FNNNAFLKNEGYDFLKSNGLIDTYDLAENKDSGVTVNKNIAGWEDNTGELRIDIIFTNRN 234

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
               ++ +R+    +     SDH  + + 
Sbjct: 235 I--KVYDSRVIFNGKNKEVVSDHFGLEIE 261


>gi|126433598|ref|YP_001069289.1| endonuclease/exonuclease/phosphatase [Mycobacterium sp. JLS]
 gi|126233398|gb|ABN96798.1| Endonuclease/exonuclease/phosphatase [Mycobacterium sp. JLS]
          Length = 255

 Score = 46.3 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/266 (12%), Positives = 75/266 (28%), Gaps = 22/266 (8%)

Query: 4   VTVATWNV-NSIRAR------IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56
           + VAT+N+ +  R+       +  LA  I+E + DI+ LQE            L ++   
Sbjct: 1   MRVATFNILHG-RSVHDGEVDVDRLAQSIRELDADIVALQEVDLHQPRSGTTDLTAVAAE 59

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT-LRIGNLYLPH 115
                   +      +        T             + + F   T   +R+  + +P 
Sbjct: 60  AMHAVSHRFVAAIAGTPGATWMAATGREQPGTAAYGIALLSRFPAETWQVVRLPRIPVPF 119

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
              +        ++   R     +    L    +     + +P  +      +  +   F
Sbjct: 120 PMYLPGPNRVQIVNEEPRAAMVGTFDTPLGPLTVANTHLSFVPGWNRVQMRHLVRDLRGF 179

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
                       +                 +F   +A          +DH++ + +    
Sbjct: 180 KGPRMLLGDLNMSPPTPARWARMRSLGEGLTF-PAHAPDRQ------LDHVL-TDDPRLR 231

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
           +      + P      SDH  ++V +
Sbjct: 232 VEKCSAVSLP-----ISDHRALVVDI 252


>gi|196013219|ref|XP_002116471.1| hypothetical protein TRIADDRAFT_30983 [Trichoplax adhaerens]
 gi|190581062|gb|EDV21141.1| hypothetical protein TRIADDRAFT_30983 [Trichoplax adhaerens]
          Length = 284

 Score = 46.3 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 43/273 (15%), Positives = 77/273 (28%), Gaps = 20/273 (7%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTED--KNFPFETLQSLNYHIETCGQKSYNGVAILSKY 74
           R   LA  +++++ DII LQE       +           +       K  +G  I S++
Sbjct: 11  RFKYLAEALRQSDYDIIGLQEVWLIKNYEALKVALKAVFPHSHYFYSGKIGSGKCIFSRF 70

Query: 75  QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRF 134
             +              A                        +   +            +
Sbjct: 71  PIVATSFTAYTLSGYPYALNHGDWLGKKGVGF-------CKIDVNGTILNVYVTHIHAEY 123

Query: 135 LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDA 194
            R     L      I     + + +     +P+I   D  F  E         ++   DA
Sbjct: 124 NRDNDVYLPHRVTEIV--QLSQLIRFTAGNSPVILIGDLNFEPEDIGYRFITTSLDLKDA 181

Query: 195 IRATHDTHHLYS--FWDYY----ADSW--SKNKGIRIDHIMLSPE-ATSLLHSARIDTKP 245
                D   LY+    DY      +S+  +     RID+I+ S +   S      +   P
Sbjct: 182 WLEAGDGVMLYTRNNIDYSDSLNTNSFTPANEIEKRIDYILYSGDHLKSQACQVTLGRIP 241

Query: 246 RGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278
                 SDH  V  +  +   R +Q+   +   
Sbjct: 242 DAAFNYSDHEGVEATFQLNARRLRQRQDMAGRF 274


>gi|159028078|emb|CAO87155.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 260

 Score = 46.3 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 49/277 (17%), Positives = 80/277 (28%), Gaps = 33/277 (11%)

Query: 4   VTV--ATWNV----------NSIRARIHNLAAWIKENNPDIICLQETKTE---DKNFPFE 48
           + +   ++N+          N  R R   +AA I   +PDII  QE +     D +    
Sbjct: 1   MKLTAMSFNIRYDKPDPDERN-WRVRREAVAALIAHYSPDIIGTQEARANQLLDLHRLLP 59

Query: 49  TLQSLNYHIETCGQKSYNGVAIL-SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107
             QSL       G   +  +    S+ + +EI      +  DV     EA      + + 
Sbjct: 60  KYQSLGSDRRGTGLDEHCAILYQPSRLKCLEIYEFWLSETPDVIGSITEAWGNPYPRMVT 119

Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167
                   G  +            K     A    E    L    DY  +    +  +  
Sbjct: 120 GAKFRTLEGQTLQFYNTHLDYYSDKAKDLGAKCIQERFCQLDLTKDYLFLTGDFNVNSQR 179

Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227
           +        L+     +            + +     Y+   Y A          ID I 
Sbjct: 180 LPRQILTQPLQSEIKLKDALADLELAEQMSFN----NYTDTPYLA----------IDTIY 225

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
                   L   ++D        PSDH PVI +  +P
Sbjct: 226 YDSRL--QLDWVKVDPSRWLNLIPSDHYPVIAAFTLP 260


>gi|270296071|ref|ZP_06202271.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. D20]
 gi|270273475|gb|EFA19337.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. D20]
          Length = 267

 Score = 46.3 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 42/265 (15%), Positives = 73/265 (27%), Gaps = 27/265 (10%)

Query: 2   SVVTVATWNV------NSIRA---RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52
           S +TV ++N+      + + A   R       IK++ PDI+ +QE    D    F     
Sbjct: 15  SQLTVISYNMRYGTAEDGVNAWEFRKPATIKMIKKHKPDILGVQE--ALDFQLAFILENC 72

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
            NY     G+         +     +    L        +   E               +
Sbjct: 73  TNYEAVGVGRIDGKHDGEHASIMYNKKKIELLEWGNFWLSSTPEIPSIGWDAACTRTATW 132

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
               +  T  K+    + +    R A +                I + +    P+I   D
Sbjct: 133 ALLKDKKTMEKFYYVNTHLDHVGRVARKEG-------LNLILEKIQKINPDNFPLILTGD 185

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                      +  + M          D+   ++ W   +          ID+I      
Sbjct: 186 FNMEHTDSSIQKLNEKMIDARTSAKKTDSFGTFNGWGTRSSI--------IDYIYY-KGF 236

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPV 257
                   I  K  G T  SDH P+
Sbjct: 237 KMCTEYVTIREKYAGKTFISDHYPI 261


>gi|171912039|ref|ZP_02927509.1| hypothetical protein VspiD_12705 [Verrucomicrobium spinosum DSM
           4136]
          Length = 339

 Score = 46.3 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/257 (12%), Positives = 65/257 (25%), Gaps = 35/257 (13%)

Query: 21  LAAWIKENNPDIICLQET-------------KTEDKNFPFETLQSLNYHIETCGQKSYNG 67
           L   +    PDI+ + E              K  D + P         H E         
Sbjct: 80  LIEILATIKPDILGVCEIGDAEDLADLQARLKVRDIDLP---------HSEMGNGGDPTR 130

Query: 68  VAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDK 127
              L    PI            +    +     I   T+ +   +      +      + 
Sbjct: 131 RLALLSRFPITSRNSQSELKYHIGDVILPMQRGILDATVALRPNFEVRFLGVHFKSQREV 190

Query: 128 ISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQ 187
               ++ +R     L               P           E+     L   +      
Sbjct: 191 PGMDQKLMRRNEAHLLRRHIESILTT---EPATRLLAYGDFNESKHEAALVEIEGVP-GT 246

Query: 188 NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH--SARIDTKP 245
           ++   D             FWD      + +   R+D+  ++    S +    + +   P
Sbjct: 247 DVSMMDVRLRDSRGETWTHFWD------AADHYSRLDYCFVNRALQSDIKKPESFVY-DP 299

Query: 246 RGWTKPSDHTPVIVSLD 262
             +   SDH P+++ +D
Sbjct: 300 PNFYDASDHRPLVIKID 316


>gi|149031531|gb|EDL86498.1| similar to putative TRAF and TNF receptor associated protein,
           isoform CRA_c [Rattus norvegicus]
          Length = 366

 Score = 46.3 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 42/280 (15%), Positives = 77/280 (27%), Gaps = 51/280 (18%)

Query: 2   SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           S ++  TWN++ +       RAR   + + +   +PD++ LQE        P        
Sbjct: 118 STISFITWNIDGLDGCNLPERAR--GVCSCLALYSPDVVFLQEV------IPS------- 162

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           Y      +     +   ++      +    G         I    T   + L   N+ L 
Sbjct: 163 YCAYLRKRARTYNIITGNEEGYFTAILLKKGRVKFKSQEIIPFPNTKMMRNLLCVNVSLG 222

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
                  T + +             + +  +             Q       +I+  D  
Sbjct: 223 GNEFCLMTSHLESTRKHSAERINQLKTVFQKM------------QEATDSTTVIFAGDTN 270

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI--------DHI 226
              +       L +  F          H  Y+ WD  A     N  +RI        D I
Sbjct: 271 LRDQEVIKCGGLPDNVFDAWEFLGKPKHCRYT-WDTKA-----NDNLRIPAACKHRFDRI 324

Query: 227 MLSPE---ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
               E               +      PSDH  ++ +L++
Sbjct: 325 FFRAEEGHLIPQSLDLIGLERLDCGRFPSDHWGLLCTLNV 364


>gi|170085645|ref|XP_001874046.1| inositol phosphophingolipids phospholipase C [Laccaria bicolor
           S238N-H82]
 gi|164651598|gb|EDR15838.1| inositol phosphophingolipids phospholipase C [Laccaria bicolor
           S238N-H82]
          Length = 430

 Score = 46.3 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 53/318 (16%), Positives = 92/318 (28%), Gaps = 46/318 (14%)

Query: 2   SVVTVATWNVNSIR-------ARIHNLAAWIKENNPDIICLQET---------------K 39
           S + + + N   ++        RI  +A ++ +++ DI+ LQE                +
Sbjct: 4   SEIRLLSLNCWGLKYVAKNRTERIQAIARFLADSDHDIVALQEIWVFADYEHVLESVSKR 63

Query: 40  TEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF 99
                F +         I T        V   S       V           A       
Sbjct: 64  LPHSKFFYSGALGAGLAIFTRFPIVTTSVNPYSLNGSPIDVAAGDWFVGKAAASVTILHP 123

Query: 100 TINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159
            +    +   +L+   G          ++     F +   Q  E    +I  GD+N IP 
Sbjct: 124 VLGHVQIFNTHLFAKGGEDGPEYNRAHRLVNAWEFAKLTRQAAERGRYVIALGDFNSIPP 183

Query: 160 PHDCYNPIIW---ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH-HLYS-FWDYYADS 214
                         +    T     +      +     +  T D+  + YS    Y A S
Sbjct: 184 TLPMTVIRDHASLTDSWVVTHPNPDATSVTNALEAITKLGITADSPLNSYSAAKGYAAGS 243

Query: 215 WSKNKGIRIDHIM--------LSPEAT---SLLHSARI---DTKPRGWTKPSDHTPVIVS 260
           W    G R+D+++         SP  T         ++   D  P      SDH  +  +
Sbjct: 244 W----GKRLDYVLYRQPERHQTSPGQTFPLLKAKECKVVLTDPVPGYNFSYSDHFGLDAT 299

Query: 261 LDIPEPRKKQQDSTSQNM 278
           L I E    Q    S+ +
Sbjct: 300 LHI-EASDVQNAEASKEL 316


>gi|53713044|ref|YP_099036.1| hypothetical protein BF1755 [Bacteroides fragilis YCH46]
 gi|52215909|dbj|BAD48502.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
          Length = 287

 Score = 46.3 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 37/284 (13%), Positives = 78/284 (27%), Gaps = 54/284 (19%)

Query: 6   VATWNV------NSI---RARIHNLAAWIKENNPDIICLQET----------KTEDKNFP 46
           V ++N+      +S+   R R   +A  I   + DI+  QE           +  +    
Sbjct: 31  VMSFNIRYDNPEDSLDNWRYRKDRVANAIHFYDVDILGTQEVLHNQLEDLKLRLPEYGVV 90

Query: 47  ---FETLQSLNYHIETCGQKSYNGV-----AILSKYQPIEIVTHLPGDDLDVQARFIEAT 98
               E  +    +     +K    V       LS+   +       G    + +      
Sbjct: 91  GVGREDGKEKGEYSALWYKKDRFNVLDSGYFWLSETPEVAGSKGWDGACERIASWVKLQD 150

Query: 99  FTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP 158
              + +   +       G                  +      L    P+I  GD+N   
Sbjct: 151 KVSDKEYFALNTHLDHVGGMA--------RREGISLMLDRVNELSDGLPVIVTGDFNSEL 202

Query: 159 QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN 218
           +     +     N      E     ++  ++ +  +          Y       +     
Sbjct: 203 ESDVIKHVTDSAN-----PEHLTDARQASSIVYGPSWSFHDFGKIPY-------NKRPL- 249

Query: 219 KGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
               ID++ +       +    I  +       SDHTPV+V+++
Sbjct: 250 ----IDYVFVRNGL--KVLRYGILAETENNGFLSDHTPVLVTVE 287


>gi|257452011|ref|ZP_05617310.1| Endonuclease/exonuclease/phosphatase [Fusobacterium sp. 3_1_5R]
          Length = 265

 Score = 46.3 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 42/272 (15%), Positives = 80/272 (29%), Gaps = 17/272 (6%)

Query: 4   VTVATWNVNSIRARIHN------LAAWIKENNPDIICLQET--KTEDKNFPFETLQSLNY 55
           + + T NV+S             LA  I E   D+I +QE   K E +    E  +    
Sbjct: 1   MKLLTINVHSW-LEEKQEEKMELLAKVIAEKRYDVIAMQEVNQKIEARLLKGEIREDNFL 59

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLP--GDDLDVQARFIEATFTINTQTLRIGNLYL 113
           +      + Y        +    I   +   G  L  +   +E      T +  + ++  
Sbjct: 60  YQLCKKIEKYTEEKYEYHWSHSHIGFDIYEEGIALLTRHSILEKEDFYCTNSKTVYSISS 119

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
                I   + + K              +E               +         +  DA
Sbjct: 120 RKIVKI-FLEIEGKEIEFYSCHMNLPNCIEENMEQNIQNILKHSSRNCLKILMGDFNTDA 178

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
                  Q   +          +   D   +Y     + +S  +    R+D+I L+ +  
Sbjct: 179 FHDQSSYQKILEQGLFDSYTLSKKKDDGVTVYKNISGWENSVEEK---RLDYIFLTEQYE 235

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
             + S+ +    + +   SDH  + V L I E
Sbjct: 236 --VESSYVIFNGKNYPCISDHNGLEVILKIKE 265


>gi|82701739|ref|YP_411305.1| endonuclease/exonuclease/phosphatase [Nitrosospira multiformis ATCC
           25196]
 gi|82409804|gb|ABB73913.1| Endonuclease/exonuclease/phosphatase [Nitrosospira multiformis ATCC
           25196]
          Length = 250

 Score = 46.3 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/261 (10%), Positives = 62/261 (23%), Gaps = 27/261 (10%)

Query: 1   MSVVTVATWNVN-SI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           ++ + +AT+N++        R  +H L   ++  N DII LQE             +   
Sbjct: 2   LNKLHIATYNIHKGFSHFNRRVMVHQLRDSLRALNADIIFLQEV--------VGEHKGHG 53

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
              E   +         S +       +   D+       +     +    + +      
Sbjct: 54  ARFENWPESPQYEFLADSIWTDFAYGKNAVYDEGHHGNAILSRYPILRWDNVDVSAHRFE 113

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
               +       +       +       +                               
Sbjct: 114 SRGLLHCEIGIPQWRENLHCICVHLGLFKRGRSRQL--QLLEKHIEELVPQDAPLVIAGD 171

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
           F      + + L        +    +     ++              R+D I +      
Sbjct: 172 FNDWREVASRILVQRLALAEVFELTEGRPARTYPSTLPL-------FRLDRIYVRGF--- 221

Query: 235 LLHSARIDTKPRGWTKPSDHT 255
            +  A++      W+K SDH 
Sbjct: 222 HIEKAQVHQGH-PWSKISDHA 241


>gi|313620750|gb|EFR92007.1| endonuclease/exonuclease/phosphatase family protein [Listeria
           innocua FSL S4-378]
          Length = 257

 Score = 46.3 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 2/49 (4%)

Query: 215 WSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             +N+  +ID+I +S E    +HS +  T        SDH PV  +L+ 
Sbjct: 210 RPENELEKIDYIFVSKEF--RVHSYKTITDQVDGCSASDHFPVTATLEW 256


>gi|229820609|ref|YP_002882135.1| Endonuclease/exonuclease/phosphatase [Beutenbergia cavernae DSM
           12333]
 gi|229566522|gb|ACQ80373.1| Endonuclease/exonuclease/phosphatase [Beutenbergia cavernae DSM
           12333]
          Length = 382

 Score = 46.3 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 24/61 (39%), Gaps = 19/61 (31%)

Query: 222 RIDHIMLSPEATSLLHSARIDTK---------PRGWT----------KPSDHTPVIVSLD 262
           R+D+I+LS    +   S R+            P  W           + SDH  ++V LD
Sbjct: 322 RLDYILLSRGLAARFTSGRVFRTGLWGTRVTRPTAWETYPEMLTGTHQASDHAALVVELD 381

Query: 263 I 263
           I
Sbjct: 382 I 382


>gi|83816161|ref|YP_446950.1| endonuclease/exonuclease/phosphatase family protein [Salinibacter
           ruber DSM 13855]
 gi|83757555|gb|ABC45668.1| endonuclease/exonuclease/phosphatase family [Salinibacter ruber DSM
           13855]
          Length = 270

 Score = 46.3 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 44/285 (15%), Positives = 78/285 (27%), Gaps = 37/285 (12%)

Query: 7   ATWNV------NS-IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
            T+NV         +RA        I+  +PD++ LQE    +          L+Y+   
Sbjct: 1   MTYNVLYATPDTGTVRA--------IEAVDPDVVALQEI--SEPRL-RHIADELDYYFHH 49

Query: 60  CGQKSYN--GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
             +   N     +LS+Y       +     L V      A   ++        L      
Sbjct: 50  SDEHEANEEDTGLLSRYPISRPTRYGALLYLTVDDPIRIANVHLSPYPYEPYALRDDEMT 109

Query: 118 PITSTKYDDK---ISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
           P  +     K             +    E     +                     +   
Sbjct: 110 PREAVAQARKTRSPEIKPVLDALSKSVQEDVPTFLMGDFNEPSHLDWTPAAAEAGLHLGL 169

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHL---YSFWDYYADSWSKNKGIRIDHIMLSPE 231
                    + +   GF DA R  H        Y++     D        RID I ++  
Sbjct: 170 EVPWPT--SRAVTERGFRDAFRVAHPDEVKRPGYTWTTLTGD--PDEVHDRIDFIYVAGA 225

Query: 232 ATSLLHSARI-DTKPRGWTK-----PSDHTPVIVSLDI-PEPRKK 269
           + S+  +  +         +     PSDH  V+ ++ + P P   
Sbjct: 226 SVSVETAYTVGLRDASPTDRSVSGYPSDHRSVVTTVSLAPSPSDP 270


>gi|313674251|ref|YP_004052247.1| endonuclease/exonuclease/phosphatase [Marivirga tractuosa DSM 4126]
 gi|312940949|gb|ADR20139.1| Endonuclease/exonuclease/phosphatase [Marivirga tractuosa DSM 4126]
          Length = 334

 Score = 46.3 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/255 (11%), Positives = 71/255 (27%), Gaps = 19/255 (7%)

Query: 22  AAWIKENNPDIICLQETKTEDK-NFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80
              + + + D + LQE   +   +F +  L SL  H+     +    V     Y P    
Sbjct: 84  IDLLSDYDFDFMGLQEVDFQSSRSFNYNQLDSLGVHLNFH--QGAYSVNWDKSYVPFPYF 141

Query: 81  THLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQ 140
                       + + +   + +  L + +  +       +   D  +   K  L   + 
Sbjct: 142 PIRNHFGRMYSGQAVLSKMQLLSNELTVFDKPINAPFYYNAFYIDRVMQINKIQLYSDTL 201

Query: 141 RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQ-----------NM 189
            +       F  +   +           W       L    + +               +
Sbjct: 202 IVMNVHLEAFDRETRELQAEEVLVEFNKWSKKYPVILMGDFNSRPPFASEVLEEEKTIEI 261

Query: 190 GFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLLHSARIDTKPRGW 248
              + +     +   Y   +    ++   +   R+D++  +      + S  +  +    
Sbjct: 262 FLEEPLIGEAISEERYLQNESQFFTFDTADPYERLDYVFYNKNKIRKIES-DVLREA--- 317

Query: 249 TKPSDHTPVIVSLDI 263
              SDH PV ++  I
Sbjct: 318 EDISDHLPVWMTFTI 332


>gi|301063079|ref|ZP_07203640.1| endonuclease/exonuclease/phosphatase family protein [delta
           proteobacterium NaphS2]
 gi|300442799|gb|EFK07003.1| endonuclease/exonuclease/phosphatase family protein [delta
           proteobacterium NaphS2]
          Length = 333

 Score = 46.3 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 44/135 (32%), Gaps = 19/135 (14%)

Query: 1   MSV-VTVATWNVNSI-------------RARI-HNLAAWIKENNPDIICLQET---KTED 42
           MS+ +T+ +WN+N I             +ARI   L  +I  + PD+I +QE    K E+
Sbjct: 1   MSLHITIVSWNMNGISFLKSEPQKRGLLKARITRQLNDFIHVHRPDLIAIQEIVRYK-EN 59

Query: 43  KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN 102
                       Y  ++             K++PI        D    Q   +     I 
Sbjct: 60  GAIQELVEPPDGYFYQSSISIDTARQNNPVKWEPIRQSGKWTSDAYLGQGNGLMWRGDIP 119

Query: 103 TQTLRIGNLYLPHGN 117
             ++           
Sbjct: 120 HCSIWDWKGEKAQRG 134


>gi|295444804|ref|NP_001128591.2| protein angel homolog 2 [Rattus norvegicus]
 gi|149041025|gb|EDL94982.1| angel homolog 2 (Drosophila) (predicted), isoform CRA_a [Rattus
           norvegicus]
          Length = 522

 Score = 46.3 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 32/97 (32%), Gaps = 5/97 (5%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73
           R  N+   IK  + D++CLQE   ++ ++  E    L+SL YH E   +           
Sbjct: 178 RFPNILKEIKHFDADVLCLQEV--QEDHYGTEIRPSLESLGYHCEYKMKTGRKPDGCAIC 235

Query: 74  YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
           ++  +            +              L +  
Sbjct: 236 FKHSKFSLLSVNPVEFCRRDIPLLDRDNIGLVLLLQP 272


>gi|296535528|ref|ZP_06897711.1| endonuclease/exonuclease/phosphatase [Roseomonas cervicalis ATCC
           49957]
 gi|296264141|gb|EFH10583.1| endonuclease/exonuclease/phosphatase [Roseomonas cervicalis ATCC
           49957]
          Length = 264

 Score = 46.3 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/283 (10%), Positives = 59/283 (20%), Gaps = 45/283 (15%)

Query: 3   VVTVATWNVN-SI----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57
           ++   +WN++  I    R  +  +   I+ + PD++ +QE                    
Sbjct: 2   ILRAMSWNIHAGIGGDGRYDLGRVLGLIRRHRPDLLAVQEI------------------- 42

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
                   +           + +    G                    L          +
Sbjct: 43  --------DSRPCGRSACAFDTLREAFGGHAIAAETMRGGEGAYGHMLLS--RWPFQEAD 92

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
               +    +                L       G               +        +
Sbjct: 93  THDLSVEGREPRQAIAARLRMPGGASLGVVAAHLGLRWRERGQQARRMAALVRGMPGPVV 152

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
            +              A+         +  +            +R+D I   P    LL 
Sbjct: 153 VMGDFNDWSWGGPVWRALAPLLPARTRHRTFPARLPL------LRLDEIFCRP--AQLLG 204

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
            + +D         SDH PV+  L +   R            P
Sbjct: 205 RSWVDRDA---AIASDHLPVLAELHVGAARHAGPARRGGQEAP 244


>gi|255101285|ref|ZP_05330262.1| putative endonuclease/exonuclease/phosphatase [Clostridium
          difficile QCD-63q42]
          Length = 209

 Score = 46.3 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 9/42 (21%)

Query: 4  VTVATWNV-------NSIRARIHNLAAWIKENNPDIICLQET 38
          + + T+N+       N  R  +  +  ++K+ + D+ICLQE 
Sbjct: 1  MKIVTYNIHKCMDSNN--RLTLTKMGLYLKQLDCDVICLQEV 40


>gi|317058560|ref|ZP_07923045.1| endonuclease/exonuclease/phosphatase [Fusobacterium sp. 3_1_5R]
 gi|313684236|gb|EFS21071.1| endonuclease/exonuclease/phosphatase [Fusobacterium sp. 3_1_5R]
          Length = 269

 Score = 46.3 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 42/272 (15%), Positives = 80/272 (29%), Gaps = 17/272 (6%)

Query: 4   VTVATWNVNSIRARIHN------LAAWIKENNPDIICLQET--KTEDKNFPFETLQSLNY 55
           + + T NV+S             LA  I E   D+I +QE   K E +    E  +    
Sbjct: 5   MKLLTINVHSW-LEEKQEEKMELLAKVIAEKRYDVIAMQEVNQKIEARLLKGEIREDNFL 63

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLP--GDDLDVQARFIEATFTINTQTLRIGNLYL 113
           +      + Y        +    I   +   G  L  +   +E      T +  + ++  
Sbjct: 64  YQLCKKIEKYTEEKYEYHWSHSHIGFDIYEEGIALLTRHSILEKEDFYCTNSKTVYSISS 123

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
                I   + + K              +E               +         +  DA
Sbjct: 124 RKIVKI-FLEIEGKEIEFYSCHMNLPNCIEENMEQNIQNILKHSSRNCLKILMGDFNTDA 182

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
                  Q   +          +   D   +Y     + +S  +    R+D+I L+ +  
Sbjct: 183 FHDQSSYQKILEQGLFDSYTLSKKKDDGVTVYKNISGWENSVEEK---RLDYIFLTEQYE 239

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
             + S+ +    + +   SDH  + V L I E
Sbjct: 240 --VESSYVIFNGKNYPCISDHNGLEVILKIKE 269


>gi|307708912|ref|ZP_07645372.1| endonuclease/Exonuclease/phosphatase family protein [Streptococcus
           mitis SK564]
 gi|307620248|gb|EFN99364.1| endonuclease/Exonuclease/phosphatase family protein [Streptococcus
           mitis SK564]
          Length = 271

 Score = 46.3 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 34/273 (12%), Positives = 78/273 (28%), Gaps = 16/273 (5%)

Query: 4   VTVATWNVNSI--RARIHNL---AAWIKENNPDIICLQETK-------TEDKNFPFETLQ 51
           +   T N +S   +            I E + D+IC QE          E  +       
Sbjct: 1   MKFLTLNTHSWMEKEAEEKFQILLEDILEKDYDLICFQEINQEITSSEVEVNDLYQALPA 60

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
           +   H +   +     ++   K        +  G D   +   I +   I  + + + ++
Sbjct: 61  AEPIHQDHYVRLLVEKLSEQGKNYYWTWAYNHIGYDRYHEGVAILSKTPIEAREILVSDV 120

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG-DYNIIPQPHDCYNPIIWE 170
             P           + +   K     +      ++        +  + +  +    +  +
Sbjct: 121 DDPTDYHTRRVALAETVVDGKELAVASVHLSWWDKGFQGEWARFESVLKELNKPLLLAGD 180

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230
            +     E  Q+      +G  DA     +    Y+            + +RID+I  + 
Sbjct: 181 FNNPAGQEGYQAILASP-LGLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYIFTTQ 239

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           E    +    +        + SDH  +   L+ 
Sbjct: 240 ELA--VEHLHVVFDGNKSPQVSDHYGLNAILNW 270


>gi|187779732|ref|ZP_02996205.1| hypothetical protein CLOSPO_03328 [Clostridium sporogenes ATCC
           15579]
 gi|187773357|gb|EDU37159.1| hypothetical protein CLOSPO_03328 [Clostridium sporogenes ATCC
           15579]
          Length = 263

 Score = 46.3 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 40/269 (14%), Positives = 79/269 (29%), Gaps = 15/269 (5%)

Query: 4   VTVATWNVNSIRARIHN------LAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYH 56
           + V T N +S             LA  I ENN D+I LQE  ++ +    F+ ++  N+ 
Sbjct: 1   MKVLTLNCHSW-QEKKQIEKIRYLAKVIYENNYDVIALQEVSQSINSKILFDNIKEDNFA 59

Query: 57  IE-TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT-INTQTLRIGNLYLP 114
           +      +          +    I      + L +  ++             +  N +  
Sbjct: 60  LILIKELEKLGENRFKILWDFAHIGYDKYEEGLAILTKYPIKEKDSFYISKSKDRNFWKT 119

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
                    Y++ +  +           E +           + +   C     + NDA 
Sbjct: 120 RKIIKCKIYYNNHLISLYSCHLGWWDDEEEDFKFQVNKLVQDLKEEETCILMGDFNNDAF 179

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
              E    +  + +    D         +  +         S  K +RID I+ +     
Sbjct: 180 LRYEG---YDYVIDKNLKDIYDLGKSKDNGVTVIGNIDGWESNRKNMRIDLILSNKNLD- 235

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            +   R+          SDH  V   ++I
Sbjct: 236 -IEYCRVIFNGINKEIISDHFGVEAKIEI 263


>gi|327192091|gb|EGE59069.1| hypothetical protein RHECNPAF_248003 [Rhizobium etli CNPAF512]
          Length = 267

 Score = 46.3 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 8/40 (20%), Positives = 19/40 (47%), Gaps = 2/40 (5%)

Query: 4  VTVATWNVNSIRARIHNLAAWIKENNPDIICLQET-KTED 42
          + + + N          L  ++++ + D++CLQE  +  D
Sbjct: 1  MRIISLNAWGGSLH-EALIDYVRQADADVLCLQEVLRAPD 39


>gi|324994996|gb|EGC26909.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis
           SK678]
          Length = 749

 Score = 46.3 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/90 (25%), Positives = 35/90 (38%), Gaps = 13/90 (14%)

Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT---K 250
            +   HD    YS++ Y   + S      +D+I +S         A +           +
Sbjct: 600 NLMQEHDAADRYSYF-YRGSNQS------LDNIFISKNLAGKAVFAPVHINASFMEEHGR 652

Query: 251 PSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
            SDH PV+V LD     K    STS + +P
Sbjct: 653 ASDHDPVVVQLDF---SKDIAASTSDSSQP 679


>gi|324993691|gb|EGC25610.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis
           SK405]
 gi|325696321|gb|EGD38212.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis
           SK160]
          Length = 749

 Score = 46.3 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/90 (25%), Positives = 35/90 (38%), Gaps = 13/90 (14%)

Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT---K 250
            +   HD    YS++ Y   + S      +D+I +S         A +           +
Sbjct: 600 NLMQEHDAADRYSYF-YRGSNQS------LDNIFISKNLAGKAVFAPVHINASFMEEHGR 652

Query: 251 PSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
            SDH PV+V LD     K    STS + +P
Sbjct: 653 ASDHDPVVVQLDF---SKDIAASTSDSSQP 679


>gi|190891534|ref|YP_001978076.1| hypothetical protein RHECIAT_CH0001932 [Rhizobium etli CIAT 652]
 gi|190696813|gb|ACE90898.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
          Length = 253

 Score = 46.3 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 8/40 (20%), Positives = 19/40 (47%), Gaps = 2/40 (5%)

Query: 4  VTVATWNVNSIRARIHNLAAWIKENNPDIICLQET-KTED 42
          + + + N          L  ++++ + D++CLQE  +  D
Sbjct: 1  MRIISLNAWGGSLH-EALIDYVRQADADVLCLQEVLRAPD 39


>gi|298376245|ref|ZP_06986201.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 3_1_19]
 gi|298267282|gb|EFI08939.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 3_1_19]
          Length = 304

 Score = 46.3 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 40/283 (14%), Positives = 92/283 (32%), Gaps = 35/283 (12%)

Query: 2   SVVTVATWNV--NSIRARIH--NLAAWIKENNPDIICLQETKTEDKN------FPFETLQ 51
           + V V+++N+  N++  ++     A  I+ +  DI+ +QE    +++       P E  +
Sbjct: 26  ATVKVSSFNIWLNTLGGKLPPSQTAKVIEASQTDIVGIQEGHIYEEDGIKHDHVP-EIAE 84

Query: 52  SLNYHIETCGQKSYN-------GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
           SL +H+   G+  Y                  I++         +    +I         
Sbjct: 85  SLGFHLFNQGEGHYILSRYPVVDSTASRYGVKIQVGKDKFCWMFNCHLYYIPYQPYQLNG 144

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
                  ++           + +   + R+ +   Q ++   P+   GD+N        +
Sbjct: 145 IPYGDYPFIDTEEEAVRFANEARREEVTRYQKDIQQVMKEGYPVFLTGDFNEP--SFLDW 202

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH---HLYSFWDYYADSWSKNKGI 221
                + D         + +    +G  D+ R  H        Y++    ++    +   
Sbjct: 203 TQRAADADIHKIKVEWPATKAFSEIGMNDSYRTIHPDEVSTPGYTWTPVPSEQEILD--- 259

Query: 222 RIDHIMLSPEATSLLHSARI------DTKPRGWTKPSDHTPVI 258
           R+D ++ S      +  + I       +       PSDH  V 
Sbjct: 260 RLDFVLYSG---CKVTDSFITGESEATSDVVVSPYPSDHRMVT 299


>gi|288922333|ref|ZP_06416526.1| Endonuclease/exonuclease/phosphatase [Frankia sp. EUN1f]
 gi|288346325|gb|EFC80661.1| Endonuclease/exonuclease/phosphatase [Frankia sp. EUN1f]
          Length = 321

 Score = 46.3 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 7/40 (17%)

Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           RIDHI+ SP     +   +I     G    SDH PV+  L
Sbjct: 286 RIDHILASPAFA--ITGYQI-----GSEFGSDHKPVLADL 318


>gi|77917592|ref|NP_001030119.1| tyrosyl-DNA phosphodiesterase 2 [Rattus norvegicus]
 gi|123780895|sp|Q3T1H5|TYDP2_RAT RecName: Full=Tyrosyl-DNA phosphodiesterase 2; Short=Tyr-DNA
           phosphodiesterase 2; AltName: Full=5'-tyrosyl-DNA
           phosphodiesterase; Short=5'-Tyr-DNA phosphodiesterase;
           AltName: Full=TRAF and TNF receptor-associated protein
 gi|74354452|gb|AAI01921.1| Traf and Tnf receptor associated protein [Rattus norvegicus]
          Length = 366

 Score = 46.3 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 42/280 (15%), Positives = 77/280 (27%), Gaps = 51/280 (18%)

Query: 2   SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           S ++  TWN++ +       RAR   + + +   +PD++ LQE        P        
Sbjct: 118 STISFITWNIDGLDGCNLPERAR--GVCSCLALYSPDVVFLQEV------IPS------- 162

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           Y      +     +   ++      +    G         I    T   + L   N+ L 
Sbjct: 163 YCAYLRKRARTYNIITGNEEGYFTAILLKKGRVKFKGQEIIPFPNTKMMRNLLCVNVSLG 222

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
                  T + +             + +  +             Q       +I+  D  
Sbjct: 223 GNEFCLMTSHLESTRKHSAERINQLKTVFQKM------------QEATDSTTVIFAGDTN 270

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI--------DHI 226
              +       L +  F          H  Y+ WD  A     N  +RI        D I
Sbjct: 271 LRDQEVIKCGGLPDNVFDAWEFLGKPKHCRYT-WDTKA-----NDNLRIPAACKHRFDRI 324

Query: 227 MLSPE---ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
               E               +      PSDH  ++ +L++
Sbjct: 325 FFRAEEGHLIPQSLDLIGLERLDCGRFPSDHWGLLCTLNV 364


>gi|312222726|ref|NP_001185949.1| protein angel homolog 2 isoform 2 [Mus musculus]
 gi|74177577|dbj|BAE38898.1| unnamed protein product [Mus musculus]
 gi|74187259|dbj|BAE22620.1| unnamed protein product [Mus musculus]
          Length = 522

 Score = 46.3 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 31/97 (31%), Gaps = 5/97 (5%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73
           R  N+   IK  + D++CLQE   ++ ++  E    L+SL YH E   +           
Sbjct: 178 RFPNILKEIKHFDADVLCLQEV--QEDHYGTEIRPSLESLGYHCEYKMKTGRKPDGCAIC 235

Query: 74  YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
           ++               +              L +  
Sbjct: 236 FKHSRFSLLSVNPVEFCRRDIPLLDRDNIGLVLLLQP 272


>gi|197101543|ref|NP_001125837.1| protein angel homolog 2 [Pongo abelii]
 gi|55729392|emb|CAH91428.1| hypothetical protein [Pongo abelii]
          Length = 522

 Score = 46.3 bits (108), Expect = 0.005,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 5/63 (7%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73
           R  N+   IK  + D++CLQE   ++ ++  E    L+SL YH E   +           
Sbjct: 178 RFPNILKEIKHFDADVLCLQEV--QEDHYGAEIRPSLESLGYHCEYKMRTGRKPDGCAIC 235

Query: 74  YQP 76
           ++ 
Sbjct: 236 FKH 238


>gi|326917345|ref|XP_003204960.1| PREDICTED: tyrosyl-DNA phosphodiesterase 2-like [Meleagris
           gallopavo]
          Length = 366

 Score = 45.9 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 32/280 (11%), Positives = 70/280 (25%), Gaps = 49/280 (17%)

Query: 2   SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           S  ++ TWN++ +       RAR   + +++   +PD++ LQE                 
Sbjct: 116 SSFSLITWNIDGLDLGNLQERAR--GVCSYLTLYSPDVVFLQEV---------------- 157

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
                          +  +     I+                    +  + +R     + 
Sbjct: 158 --------IPPYLCILQRRAGGYTIIPGNVDGYFTAMLLKKPRVKVLKQEIIRFPTTSMM 209

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
               +           +      +++    E         N + +  +    I   +   
Sbjct: 210 RNLLVVHVNISGNELCLMTSHLESTRDHSKERMKQLQIVLNKMQEESESTTVIFGGDTNL 269

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF--WDYYADSWSKNKGIRIDHIMLSPEA 232
              EV +     +N+            H  Y++               +R D +      
Sbjct: 270 RDSEVAKLGGLPKNITDVWEFLGK-PQHCRYTWDTSSNTNLRIESKCKLRFDRLY----F 324

Query: 233 TSLLHSARIDT---KPRGWTK------PSDHTPVIVSLDI 263
                   I        G  K      PSDH  ++   D+
Sbjct: 325 RPAAEGGHIIPRNMDLIGLEKLDCGRFPSDHWGLLCHFDV 364


>gi|253996227|ref|YP_003048291.1| Endonuclease/exonuclease/phosphatase [Methylotenera mobilis JLW8]
 gi|253982906|gb|ACT47764.1| Endonuclease/exonuclease/phosphatase [Methylotenera mobilis JLW8]
          Length = 251

 Score = 45.9 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/267 (9%), Positives = 69/267 (25%), Gaps = 29/267 (10%)

Query: 2   SVVTVATWNVN-SIR-----ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55
           + + +AT+N++  +        +H+    +++ + D++ LQE +        +     + 
Sbjct: 3   NTLRIATFNIHKGLTHFNTSLSLHHQRELLRKLHADVVFLQEVR--------DVHHEHSR 54

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
             +             + ++      +            +     I T  + I       
Sbjct: 55  RFDAWPTAGQMEFLADTIWKDYAYGKNAVYPAGHHGNALLSKFPIIKTTNIDISAHSSEE 114

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
              + S             +                   + I +    ++P+I   D   
Sbjct: 115 RGMLHSEINIPNWDTPLHTICVHLGLFARWRKQQLILIKDYIQRHIPAHSPLIVAGDFND 174

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLY-SFWDYYADSWSKNKGIRIDHIMLSPEATS 234
                      Q                 + S+             +R+D I  +     
Sbjct: 175 WGMRSGRHFSHQVGLQEVFAHQNGKPARSFPSWLPI----------LRLDRIY-TRGF-- 221

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261
            +    + +    + K SDH  +  +L
Sbjct: 222 KIQHVEVHSGA-HFVKLSDHAMLSATL 247


>gi|253698977|ref|YP_003020166.1| endonuclease/exonuclease/phosphatase [Geobacter sp. M21]
 gi|251773827|gb|ACT16408.1| Endonuclease/exonuclease/phosphatase [Geobacter sp. M21]
          Length = 343

 Score = 45.9 bits (107), Expect = 0.005,   Method: Composition-based stats.
 Identities = 41/262 (15%), Positives = 74/262 (28%), Gaps = 23/262 (8%)

Query: 4   VTVATWNVNSIRARIHNLAAW---IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           + V TWN   I+   H+L      ++ + PDI+  Q                  Y     
Sbjct: 95  LRVMTWN---IKYGKHDLMPLVEELERSRPDIVLFQ------DAVRAGAGPLAGY-FRDW 144

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
             +S     I S+Y                +  F+     + +  + + +++        
Sbjct: 145 HLRSRGQYLIASRYPLSAAEVFELPYSGRRKEYFLRCKVLVGSSEISLYDVHFKTPRRSL 204

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
           +     K      ++  A +R E    L       +         P++   D        
Sbjct: 205 NAF--RKAKHGPWYIPGAVERFEDNVTLRLIQARTVAGYISRETGPVLVAGDLNSPDPSL 262

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD-SWSKNKGIRIDHIMLSPEATSLLHSA 239
                 +         A     + Y  +       W +   +RIDHIM +          
Sbjct: 263 VCRTLREAGLADAFAAAGKGYGYTYGHFLLKNRIPWLRVSWMRIDHIMTNSWLV--ASRC 320

Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261
           R+     G  + SDH PVI   
Sbjct: 321 RV-----GTGRASDHRPVIADF 337


>gi|115398812|ref|XP_001214995.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114191878|gb|EAU33578.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 436

 Score = 45.9 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 41/301 (13%), Positives = 76/301 (25%), Gaps = 39/301 (12%)

Query: 3   VVTVATWNVNSIR-------ARIHNLAAWIKENNP--DIICLQETKTED--KNFPFETLQ 51
            + + T N   ++        R+  +   +   +P  +I+ LQE  T+   ++   +T  
Sbjct: 14  TIRILTLNCWGLKYIAKYRYQRLSEIGRQLALADPPPEIVGLQECWTQQDYESIRQQTRH 73

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ---TLRI 108
            L Y     G     G+AILSK+   E   H    +    A F    +         +R 
Sbjct: 74  LLPYGKFYFGGIWGAGLAILSKWPIEESSMHAYPLNGRPTAFFRGDWYVGKGVACARIRF 133

Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168
           G   +     +  T                 +  +  E                      
Sbjct: 134 GAHPVHDVAEVFCTHLHAPYEKEPNDSYICHRTAQAWEIAKLMRGAADRGHLVIGLGDFN 193

Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIR--------ATHDTHHLYSFWDYYADSWSK--- 217
                        +            +                 ++ W +      +   
Sbjct: 194 MLPSVIHPDSSVGAAIDPVEKKRNRPVPSAEFNLRVNGATCDGRFNTWRWEKAERKRLAR 253

Query: 218 ------------NKGIRIDHIMLSPE--ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                        +G R+D+I + P   A   +  A     P      SDH  V   +  
Sbjct: 254 GEDVTVDPDAPCPRGKRLDYIFVGPSRWAVDDVRIAMTQRHPTLKCSLSDHFAVEAVISR 313

Query: 264 P 264
           P
Sbjct: 314 P 314


>gi|317478380|ref|ZP_07937544.1| endonuclease/Exonuclease/phosphatase [Bacteroides sp. 4_1_36]
 gi|316905539|gb|EFV27329.1| endonuclease/Exonuclease/phosphatase [Bacteroides sp. 4_1_36]
          Length = 283

 Score = 45.9 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 42/271 (15%), Positives = 78/271 (28%), Gaps = 30/271 (11%)

Query: 6   VATWNV---------NSIRARIHNLAAWIKENNPDIICLQE-TKTEDKNFPFETLQS--L 53
           V ++N+         N+ + R  + A  I    PDII +QE  K +  +      Q   L
Sbjct: 30  VMSFNIRLDHVADSMNNWKYRKDHAAQMIAYYAPDIIGMQEVVKNQLDDLKERLPQYTAL 89

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
                   +K           +   + +   G      +   +       + +    +  
Sbjct: 90  GVGRADGEEKGEYCSLFYKTDRFELLKSGNFGLSETPDSIGKKGWDAACERIVT-WAVLK 148

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
              +      ++     + +  R  S  L LE+    AG                +    
Sbjct: 149 DKVSGREIAAFNTHFDHVGKVARRESAVLILEKIKQMAG-------DLPVIVTGDFNGTV 201

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR-IDHIMLSPEA 232
                   +   ++N   T  +            W ++       +  R ID I +   A
Sbjct: 202 DSEPVTVLTEGGMKNACVTAKVAYGPT-------WSFHDFGRIPVEKRRLIDFIFI-KGA 253

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             +     ID KP      SDH PV+  L +
Sbjct: 254 VEVERYRTIDDKP-DNGYLSDHAPVMAILKL 283


>gi|325269228|ref|ZP_08135847.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           multiformis DSM 16608]
 gi|324988457|gb|EGC20421.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           multiformis DSM 16608]
          Length = 326

 Score = 45.9 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/260 (10%), Positives = 67/260 (25%), Gaps = 44/260 (16%)

Query: 30  PDIICLQETKTEDKNFPFET-----LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLP 84
           PDI+ L E   E+ +  F+      L+   Y           G+ +   Y P        
Sbjct: 84  PDIVGLCEV--ENDSVLFDLTRRSLLRKARYEYVMTASGDVRGIDVALLYSPFSFRLIRA 141

Query: 85  GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL 144
                     +  T       +      + +G+ +                    ++  +
Sbjct: 142 DTIRVAPILDMRPTRD-----ILHVEGEVENGDTLHVFLVHAPSRMGGELYSRPFRKHVV 196

Query: 145 EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL 204
                      +          +   ND   +  ++ ++     +  +   R ++     
Sbjct: 197 NRLCDAVDSLRLCHSD-PKVLVMGDFNDYPDSPSLQTAYTHGL-VNVSAEARGSNGAKGT 254

Query: 205 YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKP------------------- 245
           Y +      +W       +D I++S      +    +                       
Sbjct: 255 YRY----HGAWGS-----LDQILVSENLRERVSGCHVHDAVFLLEPDEKYGGVKPRRNYN 305

Query: 246 --RGWTKPSDHTPVIVSLDI 263
             R     SDH P+++ L++
Sbjct: 306 GMRYNNGFSDHLPLVLHLEL 325


>gi|269127062|ref|YP_003300432.1| endonuclease/exonuclease/phosphatase [Thermomonospora curvata DSM
           43183]
 gi|268312020|gb|ACY98394.1| Endonuclease/exonuclease/phosphatase [Thermomonospora curvata DSM
           43183]
          Length = 644

 Score = 45.9 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 35/272 (12%), Positives = 75/272 (27%), Gaps = 60/272 (22%)

Query: 4   VTVATWNVN-SIRAR----IHNLAAWIKENNPDIICLQET-------KTEDKNFPFETLQ 51
           + V T+N++  + A     +  LAA I+    D++ LQE         T D         
Sbjct: 419 LRVLTYNIHHGVNAAGKLDLDALAAVIERQRADVVLLQEVGRGSLVSGTTDVGVWLSRRL 478

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
            ++          +    + S+         +P  D      ++ A   +  + + + + 
Sbjct: 479 GMHLIWGPAADGQFGNAILTSRRVLSSGSARMPKGDWSQIRGYVWARLDVGGRPVYVWST 538

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
           +L  G    + +                             +   + +        I   
Sbjct: 539 HLDGGADRAAARQ---------------------------REIAALLRAWGGAPRTIIGG 571

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
           D        +  + L   G   +    +                    G ++D I+ + +
Sbjct: 572 DMNSEPGSAEMSRFLDGTGLRASALGDYAPTTP--------------AGKKVDWILGTDD 617

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                    +        K SDH PV V++ I
Sbjct: 618 LV--FSDHGVHPS-----KTSDHYPVAVTVRI 642


>gi|269104284|ref|ZP_06156980.1| metal-dependent hydrolase [Photobacterium damselae subsp. damselae
           CIP 102761]
 gi|268160924|gb|EEZ39421.1| metal-dependent hydrolase [Photobacterium damselae subsp. damselae
           CIP 102761]
          Length = 296

 Score = 45.9 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 41/276 (14%), Positives = 82/276 (29%), Gaps = 20/276 (7%)

Query: 4   VTVATWN---VNS------IRARIH--NLAAWIKENNPDIICLQET---KTEDKNFPFET 49
           + + +WN   +N       +R       + + I++ +PDI+  QE    K      P + 
Sbjct: 26  LRIMSWNMQWLNHHASSPVLRDTDDFSQIRSIIEQVDPDILAFQEVGSLKAMTMVLPLKQ 85

Query: 50  LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI-NTQTLRI 108
              L   + +            +++    I  ++   +L    +       +   + L+I
Sbjct: 86  YDIL---LSSRADHPRYTFPNTNQFTGFAIRKNIRYRELPDFTKINLNKKGLRYGKNLKI 142

Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168
                         K   K S   +  R   ++L+L    +     N             
Sbjct: 143 WWQDQQIHLLNIHLKAGCKQSKRSKACRQLKKQLKLLSLWLKTRIENNHSYILLGDFNYP 202

Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
                    E + +    + +G        H T        ++  S        IDH++ 
Sbjct: 203 LYTSLNNKKEKQHNHWFFKQLGIPTTALKQHKTSFSCQIKIHHKKSRLITYTQPIDHVIS 262

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
                S L + +   K     + SDH P+     IP
Sbjct: 263 DKINISKLETYQYTNKEMSSNQLSDHCPLY--FSIP 296


>gi|254295374|ref|YP_003061397.1| endonuclease/exonuclease/phosphatase [Hirschia baltica ATCC 49814]
 gi|254043905|gb|ACT60700.1| Endonuclease/exonuclease/phosphatase [Hirschia baltica ATCC 49814]
          Length = 315

 Score = 45.9 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 43/283 (15%), Positives = 71/283 (25%), Gaps = 60/283 (21%)

Query: 25  IKENNPDIICLQE-------TKTEDKNFPFETLQSLNYH------------------IET 59
           +  +  DI CLQE       T   ++       +   Y                   ++ 
Sbjct: 49  LSASQADICCLQEVENLVTLTAFHNRYLRRWLKKGYFYRALVEGNDQRGIDVGVLSRVKI 108

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             + S+             +  H            IE      + TL + +    HG   
Sbjct: 109 IRKLSHADKTYADLNIKPPLGCHENDRIFRRDCLEIEVEKEGKSLTLFVCHFKSMHGGRT 168

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
            +    +  +   R L          E  I  GD+N      D                 
Sbjct: 169 ETKPVREAEAKAVRILIEQRFADPEAENWIALGDFND-YFELDGATLFDHGLGPLIRDGF 227

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
                        +     +    +Y        +        +DHI +SP   +    A
Sbjct: 228 AIDAGVTLEKSPLNRWTHYYSHGDVY-------GA--------LDHIFMSPSLAARNQDA 272

Query: 240 RI-------------DTKPR----GWTKP--SDHTPVIVSLDI 263
           R+                 R    GW +P  SDH P+ V+L I
Sbjct: 273 RLRIVRAGQPLRANRYKGHRFGGVGWMRPKSSDHCPLSVTLSI 315


>gi|225681096|gb|EEH19380.1| inositol phosphosphingolipids phospholipase C [Paracoccidioides
           brasiliensis Pb03]
          Length = 521

 Score = 45.9 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 55/343 (16%), Positives = 97/343 (28%), Gaps = 65/343 (18%)

Query: 4   VTVATWNVNSIRA----RIHNLAAW---IKENN--PDIICLQETKTEDK--NFPFETLQS 52
           +++ T N   ++     R   L      I  +N  P I+ LQE  T++   N   ET + 
Sbjct: 13  ISILTLNCWGLKFLSKYRRERLLEIGKRIAGSNNPPHIVGLQECWTQEDYNNIRRETQEI 72

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ---TLRIG 109
           L Y           G+AILSK+   E        +    A F    F         +RIG
Sbjct: 73  LPYGKFYYSGIFGGGLAILSKWPIEESTMFAYPLNGRPTAFFRGDWFVGKGVACARIRIG 132

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIF------------AGDYNII 157
                  +   +  +                    E   +              GD+N++
Sbjct: 133 PASTDIADVFCTHLHAPYEREPHDSYICHRTAQAWEIVKLMRAAAEKGHLVIGLGDFNML 192

Query: 158 PQ--------------PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHH 203
           PQ                  +        A          + + +  F            
Sbjct: 193 PQSLAHRLITSHAPVKDVWSHLHPDSSIGAAIDAAEMARKKPIPSADFNVLENGATCDGI 252

Query: 204 LYSF-WDYYADSWSKNKG-------------IRIDHIML--------SPEATSLLHSARI 241
             ++ W+    +  K +G              R+D+I +        S      + SAR+
Sbjct: 253 FNTWRWNKTQQNRLKREGNIVVDGELPDPLAKRLDYIYVGDGAFGQFSSPKKWTISSARV 312

Query: 242 ---DTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
              +  P      SDH  V  ++ +   +    +    +  PI
Sbjct: 313 GMMERHPTLHCSLSDHFSVEATIVLDTSKDSDAEDEQNSFLPI 355


>gi|163756803|ref|ZP_02163912.1| endonuclease/exonuclease/phosphatase family protein [Kordia
           algicida OT-1]
 gi|161323192|gb|EDP94532.1| endonuclease/exonuclease/phosphatase family protein [Kordia
           algicida OT-1]
          Length = 344

 Score = 45.9 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 44/277 (15%), Positives = 88/277 (31%), Gaps = 48/277 (17%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENN-------------PDIICLQE-TKTEDKNFPF 47
           + ++V ++NV     R+ N+  WIKE +             PD++  QE  K +   F F
Sbjct: 102 NSISVMSYNV-----RLFNIYNWIKETHVDKKIVDLVHADFPDVVAFQEFHKNQQAAFNF 156

Query: 48  ETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107
                  Y  +    K  N     + +    IV     +  +     I      N  T+R
Sbjct: 157 -------YTYKHVVLKGKNKKTGQAIFSKYPIVHKGSLEFPNTPNNAIYIDIVKNKDTIR 209

Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167
           + NL+L     +      ++++               +     A  + I  +       I
Sbjct: 210 VYNLHLQS---LRINPQKEELTQENSERLLKRMAKTFKMQQSQAELFEINRKNCTYKKII 266

Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227
           + + +      V ++ +      F +A      T   Y F+            +RID ++
Sbjct: 267 LGDFNNSQFSNVYKTIKGSMKDAFVEAGSGFGKTLD-YPFFP-----------MRIDFVL 314

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
           +    T       ++         SDH  +   + + 
Sbjct: 315 VDESFT-------VNKFKTFTEHYSDHYAIQSVISLD 344


>gi|154287170|ref|XP_001544380.1| predicted protein [Ajellomyces capsulatus NAm1]
 gi|150408021|gb|EDN03562.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 411

 Score = 45.9 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 28/75 (37%), Gaps = 8/75 (10%)

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           + W           G  ID   LSP     L    I  +     K SDH P+  +L+I  
Sbjct: 100 TTWQDRGSP-----GTTIDLTFLSPLLHDKLRRCAIAEEA---CKGSDHKPMETTLEITP 151

Query: 266 PRKKQQDSTSQNMKP 280
             K+ +    ++ +P
Sbjct: 152 IPKEAERRNWKDAEP 166


>gi|327490122|gb|EGF21910.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis
           SK1058]
          Length = 749

 Score = 45.9 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 23/90 (25%), Positives = 35/90 (38%), Gaps = 13/90 (14%)

Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT---K 250
            +   HD    YS++ Y   + S      +D+I +S         A +           +
Sbjct: 600 NLMQEHDAADRYSYF-YRGSNQS------LDNIFISKNLAGKAVFAPVHINASFMEEHGR 652

Query: 251 PSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
            SDH PV+V LD     K    STS + +P
Sbjct: 653 ASDHDPVVVQLDF---SKDVAASTSDSSQP 679


>gi|327462960|gb|EGF09281.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis SK1]
          Length = 749

 Score = 45.9 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 23/90 (25%), Positives = 35/90 (38%), Gaps = 13/90 (14%)

Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT---K 250
            +   HD    YS++ Y   + S      +D+I +S         A +           +
Sbjct: 600 NLMQEHDAADRYSYF-YRGSNQS------LDNIFISKNLAGKAVFAPVHINASFMEEHGR 652

Query: 251 PSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
            SDH PV+V LD     K    STS + +P
Sbjct: 653 ASDHDPVVVQLDF---SKDVAASTSDSSQP 679


>gi|325690981|gb|EGD32981.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis
           SK115]
          Length = 749

 Score = 45.9 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 23/90 (25%), Positives = 35/90 (38%), Gaps = 13/90 (14%)

Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT---K 250
            +   HD    YS++ Y   + S      +D+I +S         A +           +
Sbjct: 600 NLMQEHDAADRYSYF-YRGSNQS------LDNIFISKNLAGKAVFAPVHINASFMEEHGR 652

Query: 251 PSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
            SDH PV+V LD     K    STS + +P
Sbjct: 653 ASDHDPVVVQLDF---SKDVAASTSDSSQP 679


>gi|320335581|ref|YP_004172292.1| endonuclease/exonuclease/phosphatase [Deinococcus maricopensis DSM
           21211]
 gi|319756870|gb|ADV68627.1| Endonuclease/exonuclease/phosphatase [Deinococcus maricopensis DSM
           21211]
          Length = 309

 Score = 45.9 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 47/260 (18%), Positives = 79/260 (30%), Gaps = 53/260 (20%)

Query: 5   TVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
            + T+N+    AR       LA  I    PD++CLQET   +   P   L+ L   +   
Sbjct: 94  RLMTYNI----ARGTGGAAELARVISRAEPDVVCLQET---NTVLPG-VLRDLERRLPGY 145

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
                  V +LS++    +         D   R + AT  +  Q + + NL+        
Sbjct: 146 AAARSREVVVLSRFPVTGVQDR---ALPDTTRRLLRATVRVRGQPVTLLNLHFTTVLWRG 202

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
                      +        R     P++  GD+N  P+           ++A       
Sbjct: 203 GWAGARDRRAAQVRAVLQVARQTRG-PVVACGDFNTPPRGLVDAALREQFSNAFAQAGAG 261

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
                                      + Y   + +     RIDH+ L         +A 
Sbjct: 262 ---------------------------FGYTFPARAPLV--RIDHVWLRRA---SAVAAF 289

Query: 241 IDTKPRGWTKPSDHTPVIVS 260
           +    R     SDH P++V 
Sbjct: 290 V-PDAR----ASDHRPLVVD 304


>gi|253761401|ref|XP_002489104.1| hypothetical protein SORBIDRAFT_0069s002020 [Sorghum bicolor]
 gi|241947391|gb|EES20536.1| hypothetical protein SORBIDRAFT_0069s002020 [Sorghum bicolor]
          Length = 659

 Score = 45.9 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 40/261 (15%), Positives = 78/261 (29%), Gaps = 34/261 (13%)

Query: 4   VTVATWNVNSI--RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           +    WNV  +   +R   +  +I E+   ++ LQET  ++     E L        T  
Sbjct: 1   MRFLFWNVRGLGKTSRKQQVREFIGEHKLQMVGLQET-MKESFSDRELLDIAGTREFTWQ 59

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
                G +             L    +      +           R   +Y P  + +  
Sbjct: 60  YLPSKGKSGGILMGVDLENLELEDFSIHDFCIMMSVRDRRTNFRWRFITVYGPANHDLAD 119

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
              D+  +  +                I  GD+N+I + +D  +  I         E   
Sbjct: 120 AFLDELKAVCQESPLPV----------ILGGDFNLIREANDKNSENINMGLINIFNEFIG 169

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL--LHSA 239
             Q          +R    +   Y++ +   +    N    +D ++ S        L ++
Sbjct: 170 EMQ----------LRELKRSGQRYTWTNKQNNPILVN----LDRVLFSVNWEDHFPLSTS 215

Query: 240 RIDTKPRGWTKPSDHTPVIVS 260
              T+       SDH P++V 
Sbjct: 216 WGLTRV-----GSDHMPILVD 231


>gi|226292203|gb|EEH47623.1| inositol phosphosphingolipids phospholipase C [Paracoccidioides
           brasiliensis Pb18]
          Length = 521

 Score = 45.9 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 55/343 (16%), Positives = 97/343 (28%), Gaps = 65/343 (18%)

Query: 4   VTVATWNVNSIRA----RIHNLAAW---IKENN--PDIICLQETKTEDK--NFPFETLQS 52
           +++ T N   ++     R   L      I  +N  P I+ LQE  T++   N   ET + 
Sbjct: 13  ISILTLNCWGLKFLSKYRRERLLEIGKRIAGSNNPPHIVGLQECWTQEDYNNIRRETQEI 72

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ---TLRIG 109
           L Y           G+AILSK+   E        +    A F    F         +RIG
Sbjct: 73  LPYGKFYYSGIFGGGLAILSKWPIEESTMFAYPLNGRPTAFFRGDWFVGKGVACARIRIG 132

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIF------------AGDYNII 157
                  +   +  +                    E   +              GD+N++
Sbjct: 133 PASTDIADVFCTHLHAPYEREPHDSYICHRTAQAWEIVKLMRAAAEKGHLVIGLGDFNML 192

Query: 158 PQ--------------PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHH 203
           PQ                  +        A          + + +  F            
Sbjct: 193 PQSLAHRLITSHAPVKDVWSHLHPDSSIGAAIDAAEMARKKPIPSADFNVLENGATCDGI 252

Query: 204 LYSF-WDYYADSWSKNKG-------------IRIDHIML--------SPEATSLLHSARI 241
             ++ W+    +  K +G              R+D+I +        S      + SAR+
Sbjct: 253 FNTWRWNKTQQNRLKREGNIVVDGELPDPLAKRLDYIYVGDGAFGQFSSPKKWTISSARV 312

Query: 242 ---DTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
              +  P      SDH  V  ++ +   +    +    +  PI
Sbjct: 313 GMMERHPTLHCSLSDHFSVEATIVLDTSKDSDAEDEQNSFLPI 355


>gi|223938378|ref|ZP_03630272.1| Endonuclease/exonuclease/phosphatase [bacterium Ellin514]
 gi|223892947|gb|EEF59414.1| Endonuclease/exonuclease/phosphatase [bacterium Ellin514]
          Length = 254

 Score = 45.9 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 30/252 (11%), Positives = 56/252 (22%), Gaps = 24/252 (9%)

Query: 17  RIHNLAAWIKENNPDIICLQE-----TKTEDKNFPFETLQSLNYHIETCGQKSYNGVAIL 71
           R   +   IK  +PD++  QE      K    + P      L  +  +  +         
Sbjct: 19  RRPAMQECIKSVSPDVMGTQEGLYGQIKDIASDLPDYDWIGLGRNGGSRSEFMAVFYRKS 78

Query: 72  SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWI 131
                      L      + +             +R  +          +T +D ++   
Sbjct: 79  RLEPMEYDHFWLSDTPDVIGSSTWGNKNRRMVTWVRFKDRQTGKEFYFFNTHFDHEVQKA 138

Query: 132 KRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191
           +       ++                       N           L+             
Sbjct: 139 REKSAELVRQRIEGLKTELPVILGGDFNGGAGTNAAYKILMEGDFLKDTWVTAPQHRGNV 198

Query: 192 TDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP 251
                  H                    G RID I+     T    +A + T  +    P
Sbjct: 199 VGTFHGYHKAVP---------------NGPRIDWILTRGPVT--AEAAEVITFSKSGEMP 241

Query: 252 SDHTPV--IVSL 261
           SDH P+   +  
Sbjct: 242 SDHFPIATWLEF 253


>gi|125718549|ref|YP_001035682.1| extracellular nuclease, putative [Streptococcus sanguinis SK36]
 gi|125498466|gb|ABN45132.1| Extracellular nuclease, putative [Streptococcus sanguinis SK36]
          Length = 749

 Score = 45.9 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 23/90 (25%), Positives = 35/90 (38%), Gaps = 13/90 (14%)

Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT---K 250
            +   HD    YS++ Y   + S      +D+I +S         A +           +
Sbjct: 600 NLMQEHDAADRYSYF-YRGSNQS------LDNIFISKNLAGKAVFAPVHINASFMEEHGR 652

Query: 251 PSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
            SDH PV+V LD     K    STS + +P
Sbjct: 653 ASDHDPVVVQLDF---SKDVAASTSDSSQP 679


>gi|319938670|ref|ZP_08013034.1| RgfB protein [Streptococcus anginosus 1_2_62CV]
 gi|319811720|gb|EFW07986.1| RgfB protein [Streptococcus anginosus 1_2_62CV]
          Length = 271

 Score = 45.9 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/254 (10%), Positives = 58/254 (22%), Gaps = 17/254 (6%)

Query: 18  IHNLAAWIKENNPDIICLQETK--TEDKNFPFETLQSLNYHIETCGQKSYNGVAILS--- 72
           +  LA  I +   D+ICLQE     E +           YH        +          
Sbjct: 21  LDQLAERILQEKYDVICLQEVNQGMESEQVVQAPF----YHAVDGAIAIHKDHFACCLVE 76

Query: 73  ------KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDD 126
                          +  G D   +   I +   +    L + +   P           +
Sbjct: 77  KLAKRGLIYHWSWAYNHIGFDRFHEGVAILSLKPLKPSELLVSDANDPTDYHTRKVLLAE 136

Query: 127 KISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL 186
                +     +      ++                    ++  +           +   
Sbjct: 137 TEVDGRLVTVTSCHLSWWDKGFQEEWGQVEKELLQRDMPLVLMGDFNNPVGYEGYQYILK 196

Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR 246
             +   D+           +     A        ++ID+I  S +    +  + +    +
Sbjct: 197 SPLALQDSHAVAATVVGTATVEGDIAGWVGNKDALKIDYIFTSKDF--NVKKSAVVFDGK 254

Query: 247 GWTKPSDHTPVIVS 260
                SDH  +   
Sbjct: 255 ATPVVSDHFGLEAE 268


>gi|255656137|ref|ZP_05401546.1| putative endonuclease/exonuclease/phosphatase [Clostridium
          difficile QCD-23m63]
 gi|296450430|ref|ZP_06892186.1| endonuclease/exonuclease/phosphatase [Clostridium difficile
          NAP08]
 gi|296879447|ref|ZP_06903441.1| endonuclease/exonuclease/phosphatase [Clostridium difficile
          NAP07]
 gi|296260691|gb|EFH07530.1| endonuclease/exonuclease/phosphatase [Clostridium difficile
          NAP08]
 gi|296429593|gb|EFH15446.1| endonuclease/exonuclease/phosphatase [Clostridium difficile
          NAP07]
          Length = 209

 Score = 45.9 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 9/42 (21%)

Query: 4  VTVATWNV-------NSIRARIHNLAAWIKENNPDIICLQET 38
          + + T+N+       N  R  +  +  ++K+ N D+ICLQE 
Sbjct: 1  MKIVTYNIHKGMDSNN--RLTLTKMGLYLKQLNCDVICLQEV 40


>gi|108862425|gb|ABA96964.2| retrotransposon protein, putative, LINE subclass [Oryza sativa
           Japonica Group]
          Length = 1682

 Score = 45.9 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 2/34 (5%)

Query: 9   WNVNSIRARIHN--LAAWIKENNPDIICLQETKT 40
           WNV  + A+     + A++ +    I+CLQETK 
Sbjct: 819 WNVRGLNAQAKQDVVKAFVHKVGASIVCLQETKL 852


>gi|14389301|ref|NP_112650.1| sphingomyelin phosphodiesterase 2 [Rattus norvegicus]
 gi|20138814|sp|Q9ET64|NSMA_RAT RecName: Full=Sphingomyelin phosphodiesterase 2; AltName:
           Full=Lyso-platelet-activating factor-phospholipase C;
           Short=Lyso-PAF-PLC; AltName: Full=Neutral
           sphingomyelinase; Short=N-SMase; Short=nSMase
 gi|9757704|dbj|BAB08219.1| neutral sphingomyelinase [Rattus norvegicus]
 gi|60552699|gb|AAH91139.1| Sphingomyelin phosphodiesterase 2, neutral [Rattus norvegicus]
 gi|149046987|gb|EDL99735.1| sphingomyelin phosphodiesterase 2, neutral, isoform CRA_b [Rattus
           norvegicus]
          Length = 422

 Score = 45.9 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 37/287 (12%), Positives = 80/287 (27%), Gaps = 45/287 (15%)

Query: 15  RA-RIHNLAAWIKENNPDIICLQETKTEDK-----NFPFETLQSLNYHIETCGQKSYNGV 68
           RA R+  L  ++   + D+  L+E  +E            T    +Y          +G+
Sbjct: 26  RADRMKRLGDFLNLESFDLALLEEVWSEQDFQYLKQKLSLTYPDAHY---FRSGIIGSGL 82

Query: 69  AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN-----------LYLPHGN 117
            + S++   EIV H+   +      +    F      L + +                 +
Sbjct: 83  CVFSRHPIQEIVQHVYTLNGYPYKFYHGDWFCGKAVGLLVLHLSGLVLNAYVTHLHAEYS 142

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
                 +  +++      +F     +    ++  GD N+ P+   C     W       +
Sbjct: 143 RQKDIYFAHRVAQAWELAQFIHHTSKKANVVLLCGDLNMHPKDLGCCLLKEWTGLRDAFV 202

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
           E                                    +    G+RID++         + 
Sbjct: 203 ETEDFKGSEDGCTMVPKNCYVSQQDL---------GPFP--FGVRIDYV-----LYKAVS 246

Query: 238 SARIDT---------KPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTS 275
              I            P   T  SDH  ++ +L +     ++   ++
Sbjct: 247 GFHICCKTLKTTTGCDPHNGTPFSDHEALMATLCVKHSPPQEDPCSA 293


>gi|240102422|ref|YP_002958731.1| Metal-dependent hydrolase [Thermococcus gammatolerans EJ3]
 gi|239909976|gb|ACS32867.1| Metal-dependent hydrolase [Thermococcus gammatolerans EJ3]
          Length = 584

 Score = 45.9 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 23/72 (31%), Gaps = 7/72 (9%)

Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPS 252
              R        Y+F         K     ID+I+L  +  + +               S
Sbjct: 520 RDYRDAFPERPPYTFLWERNGVVDKEN---IDYILLKNDWPAEVKDDGCLCDVL----VS 572

Query: 253 DHTPVIVSLDIP 264
           DH PV   +++P
Sbjct: 573 DHRPVWAVIELP 584


>gi|126723004|ref|NP_001075923.1| nocturnin [Bos taurus]
 gi|126010657|gb|AAI33609.1| CCR4 carbon catabolite repression 4-like (S. cerevisiae) [Bos
           taurus]
 gi|296478738|gb|DAA20853.1| CCR4 carbon catabolite repression 4-like [Bos taurus]
          Length = 427

 Score = 45.9 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 36/256 (14%), Positives = 64/256 (25%), Gaps = 28/256 (10%)

Query: 21  LAAWIKENNPDIICLQETKTEDKNFPFE--TLQSLNYHIETCGQKSYNGVAILSKYQPIE 78
           +   I    PDI+CLQE    D  F      L  L Y      +         S    +E
Sbjct: 179 ILEEILAYQPDILCLQEV---DHYFDTFQPLLSRLGYQGTFFPKP-------WSPCLDVE 228

Query: 79  IVTHLPGD--DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
                 G           +  +  I    + +    +     +   +   +       L+
Sbjct: 229 HNNGPDGCALFFLQNRFKLVNSANIRLTAMTLKTNQVAIAQTLECKESSRQFCIAVTHLK 288

Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN----MGFT 192
             +               N+         P+I   D               +        
Sbjct: 289 ARTGWERFRSAQGCDLLQNLQTITQGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAY 348

Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS------PEATSLLHSARIDTKPR 246
             + A   +   Y+ W        ++    +D+I  S        A  LL   +I     
Sbjct: 349 KLLSADGQSEPPYTTWKIRTSGECRHT---LDYIWYSRQALSVRSALDLLTEEQIGPNRL 405

Query: 247 -GWTKPSDHTPVIVSL 261
             +  PSDH  ++   
Sbjct: 406 PSFNYPSDHLSLVCDF 421


>gi|294947946|ref|XP_002785539.1| hypothetical protein Pmar_PMAR022273 [Perkinsus marinus ATCC
          50983]
 gi|239899518|gb|EER17335.1| hypothetical protein Pmar_PMAR022273 [Perkinsus marinus ATCC
          50983]
          Length = 475

 Score = 45.9 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 4/42 (9%)

Query: 1  MSVVTVATWNVNS-IR---ARIHNLAAWIKENNPDIICLQET 38
          M  +TV T+NV++ I+    RI  L   ++  + D++CLQE 
Sbjct: 23 MEDLTVLTYNVDTAIKDMPQRIKILIEVLQNRDYDVVCLQEV 64


>gi|58038559|ref|YP_190523.1| hypothetical protein GOX0070 [Gluconobacter oxydans 621H]
 gi|58000973|gb|AAW59867.1| Hypothetical membrane-spanning protein [Gluconobacter oxydans 621H]
          Length = 208

 Score = 45.9 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 42/263 (15%), Positives = 77/263 (29%), Gaps = 72/263 (27%)

Query: 5   TVATWNVNSIR---ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
            + +WN+   R   A + ++   I+  +PDI+ +QE +T     P E L    Y+     
Sbjct: 12  KILSWNL--YRWEGASLEDVLTVIRAEDPDIVVMQEAQTAVDELP-EILG--GYYDRIPL 66

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
               +G A  S+              L            I+  +  + N++L HG  +  
Sbjct: 67  PGRPHGTACWSRLPFT---RPPSFCRLPRGLLVKRTAQLIDFGSFSLANVHLSHGQILNR 123

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            +    IS   R          L  P++  G  ++ P+                      
Sbjct: 124 RQL-RSISANMRHRAVIMGDFNLVGPVLLPGFLDVGPKEKTHRMLNHVP----------- 171

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
                                                  +R+D  ++     S L     
Sbjct: 172 ---------------------------------------LRLDRCLV--RGLSRL----- 185

Query: 242 DTKPRGWTKP-SDHTPVIVSLDI 263
             + R   +  SDH P+ V+L +
Sbjct: 186 --EARALPRFGSDHRPISVTLRL 206


>gi|119613776|gb|EAW93370.1| angel homolog 2 (Drosophila), isoform CRA_e [Homo sapiens]
          Length = 522

 Score = 45.9 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 5/63 (7%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73
           R  N+   IK  + D++CLQE   ++ ++  E    L+SL YH E   +           
Sbjct: 178 RFPNILKEIKHFDADVLCLQEV--QEDHYGAEIRPSLESLGYHCEYKMRTGRKPDGCAIC 235

Query: 74  YQP 76
           ++ 
Sbjct: 236 FKH 238


>gi|70794813|ref|NP_067396.3| protein angel homolog 2 isoform 1 [Mus musculus]
 gi|81878438|sp|Q8K1C0|ANGE2_MOUSE RecName: Full=Protein angel homolog 2
 gi|22137626|gb|AAH24907.1| Angel homolog 2 (Drosophila) [Mus musculus]
 gi|74177531|dbj|BAE34634.1| unnamed protein product [Mus musculus]
 gi|148681068|gb|EDL13015.1| angel homolog 2 (Drosophila), isoform CRA_a [Mus musculus]
          Length = 544

 Score = 45.9 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 31/97 (31%), Gaps = 5/97 (5%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73
           R  N+   IK  + D++CLQE   ++ ++  E    L+SL YH E   +           
Sbjct: 200 RFPNILKEIKHFDADVLCLQEV--QEDHYGTEIRPSLESLGYHCEYKMKTGRKPDGCAIC 257

Query: 74  YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
           ++               +              L +  
Sbjct: 258 FKHSRFSLLSVNPVEFCRRDIPLLDRDNIGLVLLLQP 294


>gi|312277609|gb|ADQ62266.1| Metal-dependent hydrolase [Streptococcus thermophilus ND03]
          Length = 303

 Score = 45.9 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/272 (10%), Positives = 69/272 (25%), Gaps = 26/272 (9%)

Query: 2   SVVTVATWNVNSIRARIH----NLAAWIKEN----NPDIICLQETKTEDKNFPFETLQ-S 52
            ++   T N +S    +          +KE       DIIC QE    ++      ++  
Sbjct: 32  KIMKFLTLNTHS---WMEEDAEGKFQTLKEQILKAQYDIICFQEV---NQEIETAAVETD 85

Query: 53  LNYHIETCGQKSYNGVAIL---------SKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
             YH+       +    +                    +  G D   +   + +   +  
Sbjct: 86  AYYHVLPSATSIHQDHFVRLLVEKLAEEGLQYHWTWAYNHIGYDHLNEGVAVLSRQPLTA 145

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
             + + ++  P           +     +     +      ++                 
Sbjct: 146 SEILVSDVDDPTDYHTRRVAVAETTVDGREVAVASIHLSWWDKGFQEEWARIEERFQSIG 205

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223
              I+  +                 +   D+ +    T+  Y+            + +RI
Sbjct: 206 KPIILAGDFNNPAGREGYQTILASPLKLQDSFQVAQKTNGSYTVGPGIDGWKGNEEPLRI 265

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHT 255
           D++  S E    ++   +       +  SDH 
Sbjct: 266 DYVFASQEWA--VNRLSVIFDGNNQSLVSDHY 295


>gi|164655745|ref|XP_001729001.1| hypothetical protein MGL_3789 [Malassezia globosa CBS 7966]
 gi|159102890|gb|EDP41787.1| hypothetical protein MGL_3789 [Malassezia globosa CBS 7966]
          Length = 473

 Score = 45.9 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 46/317 (14%), Positives = 88/317 (27%), Gaps = 53/317 (16%)

Query: 1   MSVVTVATWNVNSIR----ARIHNLAAW---IKENNPDIICLQETKTEDKNFPFETLQ-- 51
           MS + V T N   +R     R   LAA    + + + D+I LQE                
Sbjct: 64  MSELRVLTLNCWGLRFFSKLRKERLAAISDRLADTHYDVIALQEIWVRIAGLAAHARSFV 123

Query: 52  --SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLP-------------GDDLDVQARFIE 96
              + Y          +G+AI+++Y  + + TH+                      R   
Sbjct: 124 ATDIPYGKFFLTGAFGSGLAIMTRYPIVSMETHMFRLTGTPIYVQEGDWIAGKACGRITM 183

Query: 97  ATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI 156
           A   +    +   +     G      +   + +      +  +   +    ++  GD N 
Sbjct: 184 AHPQLGLVDVYTSHFTAHGGQSGPEIQRVYRTTEAFELAQKCTASAQAGRHVLCMGDLNS 243

Query: 157 IPQPHDCY------------NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL 204
           +P                    +   +               +N       +        
Sbjct: 244 LPSSLCMALLQSVGGLQDALAHVHNGDSGADITCDSPKNTWSKNKKIDQYAQQHGGKCLD 303

Query: 205 YSFWDYYADSWSKNKGIRIDHIMLSPE--ATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
           Y    Y   +   N+  R+ +   S E   T L+ S ++          SDH  + V   
Sbjct: 304 Y--VLYRGPA---NRMSRLSY--SSHEVTFTDLIDSLQVSY--------SDHFGLEVVFS 348

Query: 263 IPEPRKKQQDSTSQNMK 279
           I  P   +    S+  +
Sbjct: 349 IVSPEDGKISGGSKKFE 365


>gi|115947205|ref|XP_797066.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
 gi|115961731|ref|XP_001190128.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 1060

 Score = 45.9 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 43/290 (14%), Positives = 81/290 (27%), Gaps = 38/290 (13%)

Query: 8   TWNVNSIRARIHNLAAWIKE--NNPDI--ICLQETKTEDKNFPF-ETLQSLNYHIETCGQ 62
           TWNVN  +    +L  W+      PD+  I  QE     + F F ++++   +H      
Sbjct: 406 TWNVNG-KGATEDLRNWLAADPKPPDMYAIGFQELDLSKEAFLFNDSIREEEWHKRVIMC 464

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL---------------R 107
              +GV I  K   +  +  L            E         +                
Sbjct: 465 LHQDGVYIKLKLIRLVGMMLLVFIQERHYPYIDEVIAGTVGTGIMGKMGNKGAVAVRFNF 524

Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167
               +    + + +   + +          A  + E E         + +       N  
Sbjct: 525 HNTSFCFINSHLAAHMEEYERRNQDYHDICARMKFEREHHQPLGVMQHDVVIWMGDLNYR 584

Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW----SKNKGIRI 223
           I  + A  T++        + +   D +    +   ++  +D     +      N G   
Sbjct: 585 IN-DLAVDTVKTLIYNNSFKELLMQDQLNRQRELSRVFKGFDEAPIGFLPTYKYNSGS-- 641

Query: 224 DHIMLS-----PEATSLLH---SARIDTKPRG--WTKPSDHTPVIVSLDI 263
           D    S     P     +    +  +    R     + SDH PV    DI
Sbjct: 642 DEWDSSEKQRVPAWCDRILHRGACIVPKVYRSHMKLRLSDHKPVSALYDI 691


>gi|50307403|ref|XP_453680.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49642814|emb|CAH00776.1| KLLA0D13860p [Kluyveromyces lactis]
          Length = 941

 Score = 45.9 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 52/303 (17%), Positives = 96/303 (31%), Gaps = 47/303 (15%)

Query: 8   TWNVNSIRARIHNLAAWIK--ENNPD--IICLQET---------------KTEDKNFPFE 48
           T+NVN  +     L  W+K    +PD  +I L+E                KT  +     
Sbjct: 528 TFNVNG-KLSKEKLEGWLKPENESPDLYVIGLEEIVELSPGHMLATDPYIKTFWEKKLLS 586

Query: 49  TLQSLN---YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDV-------QARFIEAT 98
            + S N   YH     Q     + + +  +    + H+ GD               I   
Sbjct: 587 EINSYNDKKYHAVFNSQLGGLALLVFTDEENKSRIKHIEGDMKKTGFGGISSNKGAIAVH 646

Query: 99  FTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP 158
             ++         +L  G      +++D  S  K        R++  + +I+ GD+N   
Sbjct: 647 LWLSNTKFCFVVSHLSAGLENVEQRHNDYKSIAKHIRFSKGTRIKDHDGVIWMGDFNFRI 706

Query: 159 QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF-WDYYADSWSK 217
              +        +     L  +    +    G +       +     ++ ++   D +  
Sbjct: 707 LLSNDDVRQAIIDKNYHRLFEKDQLNQQMISGESFPFFDEMEITFPPTYKFNPGTDVYDT 766

Query: 218 NKGIRIDHIMLSPEATSLLHS-ARIDTKPRGW----TKPSDHTPV----IVSLD-IPEPR 267
           ++ +RI      P  T  + S   I  +           SDH PV       L  I EP+
Sbjct: 767 SEKMRI------PAWTDRILSRGEILRQELYGSAEDIVFSDHRPVYGLFTAKLTVIDEPK 820

Query: 268 KKQ 270
           K +
Sbjct: 821 KAK 823


>gi|51950578|gb|AAA70222.2| putative ORF2 [Drosophila melanogaster]
          Length = 1219

 Score = 45.9 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 40/261 (15%), Positives = 71/261 (27%), Gaps = 48/261 (18%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           MS +T+  WN+        +L   IK+ +P II LQET  +             Y     
Sbjct: 1   MS-LTIIQWNLKGYLNNYSHLLILIKKYSPHIISLQETHIQ-------------YTNNIP 46

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
              +Y  +  ++  +   +                    T+   T+ I  + +   + + 
Sbjct: 47  TPINYKLLTNIATNRFGGVR----------LLVHKSIQHTVLNITIDIEAIAINIESKLK 96

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
              +   IS  K             +        +     H   +P   +        + 
Sbjct: 97  LNIFSTYISPTKNITNQTLHNTFNIQQTPSLITGDFNGWHHPWGSPTTNKRGKITHRFID 156

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
                L N          +     Y+                ID  + SP         +
Sbjct: 157 NMHLILLNDKSPTHFSTHN----TYTH---------------IDLTLCSPILAPHAKW-K 196

Query: 241 IDTKPRGWTKPSDHTPVIVSL 261
           I     G    SDH P+I +L
Sbjct: 197 ILNDLHG----SDHFPIITTL 213


>gi|295673442|ref|XP_002797267.1| inositol phosphosphingolipids phospholipase C [Paracoccidioides
           brasiliensis Pb01]
 gi|226282639|gb|EEH38205.1| inositol phosphosphingolipids phospholipase C [Paracoccidioides
           brasiliensis Pb01]
          Length = 521

 Score = 45.9 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 55/343 (16%), Positives = 97/343 (28%), Gaps = 65/343 (18%)

Query: 4   VTVATWNVNSIRA----RIHNLAAW---IKENN--PDIICLQETKTEDK--NFPFETLQS 52
           +++ T N   ++     R   L      I  +N  P I+ LQE  T++   N   ET + 
Sbjct: 13  ISILTLNCWGLKFLSKYRHERLLEIGKRIAGSNNPPHIVGLQECWTQEDYNNIRRETQEI 72

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ---TLRIG 109
           L Y           G+AILSK+   E        +    A F    F         +RIG
Sbjct: 73  LPYGKFYYSGIFGGGLAILSKWPIEESTMFAYPLNGRPTAFFRGDWFVGKGVACARIRIG 132

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIF------------AGDYNII 157
                  +   +  +                    E   +              GD+N++
Sbjct: 133 PASTDIADVFCTHLHAPYEREPHDSYICHRTAQAWEIVKMMRAAAEKGHLVIGLGDFNML 192

Query: 158 PQ--------------PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHH 203
           PQ                  +        A          + + +  F            
Sbjct: 193 PQSLAHRLITSHAPVKDVWSHLHPDSSIGAAIDAAEMARKKPIPSADFNVLENGATCDGI 252

Query: 204 LYSF-WDYYADSWSKNKG-------------IRIDHIML--------SPEATSLLHSARI 241
             ++ W+    +  K +G              R+D+I +        S      + SAR+
Sbjct: 253 FNTWRWNKTQQNRLKREGNIVVDGELADPLAKRLDYIFVGDGAFGHFSSPKKWTISSARV 312

Query: 242 ---DTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
              +  P      SDH  V  ++ +   +    +    +  PI
Sbjct: 313 GMMERHPTLHCSLSDHFSVEATIVLDTSKDSDAEDEQNSFLPI 355


>gi|171676872|ref|XP_001903388.1| hypothetical protein [Podospora anserina S mat+]
 gi|170936503|emb|CAP61163.1| unnamed protein product [Podospora anserina S mat+]
          Length = 380

 Score = 45.9 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/75 (28%), Positives = 30/75 (40%), Gaps = 5/75 (6%)

Query: 188 NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS--LLHSARIDTKP 245
            +   D  RA H T   Y++       W  +   R+D I+ S       L+ S  I   P
Sbjct: 304 CLDAIDVFRALHRTERRYTYHP-RTAHWGSSSD-RVDLILASKRLWEEGLVLSTGILDSP 361

Query: 246 RGWTKPSDHTPVIVS 260
           +    PSDH P+ V 
Sbjct: 362 Q-ERGPSDHVPLWVE 375


>gi|328881833|emb|CCA55072.1| hypothetical protein SVEN_1785 [Streptomyces venezuelae ATCC 10712]
          Length = 248

 Score = 45.9 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 36/264 (13%), Positives = 76/264 (28%), Gaps = 34/264 (12%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           +V+ V ++NV S+R     LA  I+  +PD++ +QE                        
Sbjct: 17  AVLRVLSYNVRSMRDDEDALARVIRACDPDLVFVQE-------------------APRFF 57

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +   +   + +K + + +          +               L +       G     
Sbjct: 58  RWRKHAARLAAKSELVMLSGGATAAGPMLLCSLRATVERTEDVLLPLTPGLHRRGLATAV 117

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            ++      +        Q     +  +       +  P+      + E         R+
Sbjct: 118 VRFAGARVGLVSCHLSLRQDERYAQAGMVLDRVAALGTPYALVAGDLNEG--PGGPAFRR 175

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             ++LQ+          H +                +   RID I+ +P    L      
Sbjct: 176 LAKELQDGWEVSPWGGEHTST-------------PADPHQRIDAILATPGVEFLGCGVPT 222

Query: 242 DTKPRGWTKPSDHTPVIVSLDIPE 265
           D  P      +DH PV+ ++ +P 
Sbjct: 223 DLDPADLRAATDHLPVLAAVRVPA 246


>gi|327405504|ref|YP_004346342.1| Endonuclease/exonuclease/phosphatase [Fluviicola taffensis DSM
           16823]
 gi|327321012|gb|AEA45504.1| Endonuclease/exonuclease/phosphatase [Fluviicola taffensis DSM
           16823]
          Length = 375

 Score = 45.9 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 50/278 (17%), Positives = 86/278 (30%), Gaps = 45/278 (16%)

Query: 9   WNVNSIRARI---------------HNLAAWIKENNPDIICLQETKTEDK-------NFP 46
           WNV S   R+               +N+  +I+E NPD++C QE   +DK       +  
Sbjct: 105 WNVMSYNVRLFDVYNSSLAGRNESRNNIVKYIQEVNPDVVCFQEFFHQDKPSSFSTRDTL 164

Query: 47  FETLQSLNYH---IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
            + L    YH         +   G+ +LSKY  I     +  +        I A      
Sbjct: 165 IDLLDYKYYHERYSHRIRNRQNFGICMLSKYPIIAKGDVMFENFKTTDNYCIFADIVKGD 224

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
            T+R  N++L                  +   + ++ RL +++  I   +     +    
Sbjct: 225 DTIRFYNIHLQSIKLQQEDYELFGEKNKQAGGKKSTARLLIDKLRIAYPERAEQAERVVE 284

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI-- 221
           +                     + N   +D +          SF +          G   
Sbjct: 285 HLKTSPYPVVICGDFNDTPMSYVYNQFNSDLVD---------SFRETQTGIGITYVGRVP 335

Query: 222 --RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257
             RID+I  S +      + +I   P      SDH  V
Sbjct: 336 AGRIDYIFHSGDLG--AVNFQIQAVPY-----SDHRAV 366


>gi|171914576|ref|ZP_02930046.1| Endonuclease/exonuclease/phosphatase [Verrucomicrobium spinosum DSM
           4136]
          Length = 804

 Score = 45.9 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 44/290 (15%), Positives = 85/290 (29%), Gaps = 59/290 (20%)

Query: 3   VVTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQET-----KTEDKNFPFETLQS 52
           V+ V ++N +S      R     +A  I   +PD++ +QE      ++  ++      + 
Sbjct: 549 VLRVMSYNAHSCIGMDGRVSPRRIARVINHYSPDLVAVQELEHGRSRSRGEDQATRVAEL 608

Query: 53  LNYHIETCGQ----KSYNGVAILSKYQPIEIVTH----LPGDDLDVQARFIEATFTINTQ 104
             Y +  C          G A+LS+     + T      PG+        I    T+  Q
Sbjct: 609 TGYEVVFCPTVTRAAERYGHALLSRRPVEVVKTGLLPADPGNWWPEPRSAIWVRTTLEGQ 668

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
            + +   +L   +       +     +          +   EP++  GD+N         
Sbjct: 669 VVNMVATHLGLSSR------ERVAQMLSLLGPDWLGPVVETEPVVLCGDFNFGVGSPGYK 722

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRID 224
             I    D     +  +      ++                               IR+D
Sbjct: 723 LAITALRDVQSITKGWRPVNTFSSLQPF----------------------------IRLD 754

Query: 225 HIMLSPEATSLLHSARIDTKPRGW--TKPSDHTPVIVSLDIPEPRKKQQD 272
           H+ +S   T           PR       SDH P++  L +      +  
Sbjct: 755 HVFISSHFT-----VEKLRVPRTQVTRVASDHLPLVADLRLSSSAAAETT 799


>gi|163753635|ref|ZP_02160758.1| Endonuclease/exonuclease/phosphatase [Kordia algicida OT-1]
 gi|161325849|gb|EDP97175.1| Endonuclease/exonuclease/phosphatase [Kordia algicida OT-1]
          Length = 269

 Score = 45.9 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 31/270 (11%), Positives = 68/270 (25%), Gaps = 31/270 (11%)

Query: 4   VTVATWNVNSI----RAR-IHNLAAWIKENNPDIICLQET-----KTEDKNFPFETLQSL 53
           +T+ +WN+        A  I  +A  +K    DII +QE        +  N   E L+  
Sbjct: 21  ITIISWNIQHFGKTKNAEEIEKIAEIVKH--ADIIAIQEVVTTFQGVQAVNRLTEALEKK 78

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
               +    +  N  + +++   I             +   ++    +  +   +   Y+
Sbjct: 79  GESWDYLISEKTNSPSRMTECYAIVWKNKHIKIKKGHEGSLVKELDKMVDREPFLVQFYV 138

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
              +      +        R           +                           A
Sbjct: 139 ADTSFFVMNYHAKPHKRNPRPEVKELLAYVQKNYKNKKFILAGDFNLSQSEEVFKNFKLA 198

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
            F          L+ +    +       +  Y+      ++              S +  
Sbjct: 199 GFKPVNIDQKTTLKLICKNASYLNYPIDNIFYT---PKINA-------------TSTKII 242

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             +      T  R   + SDH PV +   +
Sbjct: 243 DFVKHCDNLTASR---RLSDHLPVELKFRL 269


>gi|15678949|ref|NP_276066.1| hypothetical protein MTH929 [Methanothermobacter thermautotrophicus
           str. Delta H]
 gi|2622027|gb|AAB85427.1| unknown [Methanothermobacter thermautotrophicus str. Delta H]
          Length = 231

 Score = 45.9 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 38/269 (14%), Positives = 83/269 (30%), Gaps = 49/269 (18%)

Query: 4   VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + V TWN+N  RA  R   L +++ E   D    QE        P E     NYH     
Sbjct: 3   LKVLTWNLN--RASYRRRKLWSYMGELEFDAGFFQEVYM----IPNEVR--WNYHTFRGE 54

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
             +      L              D+  ++  ++     I   +L + ++Y   G     
Sbjct: 55  MNTLLLHKDLMLDSMKR-NYLEISDNHCIEDFYVSCRIEIGGNSLSLFSIYNYIG--PAD 111

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
           + + + +  +  ++      + +        +++   +                      
Sbjct: 112 SDFSEFLDLLYNYIEEGEDLIIIGGDFNINKNFSPSLRRLAL-----------------L 154

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR- 240
           + +    +          +    ++F       +       ID++ +       +     
Sbjct: 155 AEEMTGRLSELGFRDVLREEEDPFTFMTPNGGKYQ------IDYLFVPEGV--KILDVWH 206

Query: 241 ------IDTKPRGWTKPSDHTPVIVSLDI 263
                 I+T+PR     SDH P++V+L+I
Sbjct: 207 PPAGEIIETRPR----LSDHIPLMVTLEI 231


>gi|313159654|gb|EFR59012.1| endonuclease/exonuclease/phosphatase family protein [Alistipes sp.
           HGB5]
          Length = 250

 Score = 45.9 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 39/265 (14%), Positives = 69/265 (26%), Gaps = 51/265 (19%)

Query: 4   VTVATWNV-NSIRAR-----IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57
           V   ++N+ N  R       +  +A  I    PD++ LQE                    
Sbjct: 28  VKFMSYNIRNG-RGADDVQDLGRIAEVIGRVAPDVVALQE-------------------- 66

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
                   NG  I  +   +  +       +D              + L +  + LP   
Sbjct: 67  VDSVTGRMNGRFIPEELGRMTGMHARFCRAIDYDGGGYGIGLLSRAEPLSVRRIPLPGRE 126

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
                   +   ++      +    +    L          +           +DA   L
Sbjct: 127 EARVLLMAEFPGYVVCVTHLSLSPEDQRASLPIIRQATDTCRKPVLLAGDFNMDDAEEVL 186

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
                  +  +        +   +                   IRID+I+       L  
Sbjct: 187 GGLGGEFRPLSDTAQLTFPSDRPS-------------------IRIDYILG----RGLPQ 223

Query: 238 SARI-DTKPRGWTKPSDHTPVIVSL 261
           SA+I +      T  SDH P+ VSL
Sbjct: 224 SAKIAERTVDYTTVASDHCPLWVSL 248


>gi|242068985|ref|XP_002449769.1| hypothetical protein SORBIDRAFT_05g022920 [Sorghum bicolor]
 gi|241935612|gb|EES08757.1| hypothetical protein SORBIDRAFT_05g022920 [Sorghum bicolor]
          Length = 705

 Score = 45.9 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 2/42 (4%)

Query: 4  VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTEDK 43
          + +A WN   +   A +  L  + K    DI+ L ET+  +K
Sbjct: 1  MKIAVWNCRGLNNSAAVRGLLNFQKSEGVDILFLSETRMTEK 42


>gi|18309402|ref|NP_561336.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens str. 13]
 gi|18144078|dbj|BAB80126.1| hypothetical protein [Clostridium perfringens str. 13]
          Length = 263

 Score = 45.9 bits (107), Expect = 0.006,   Method: Composition-based stats.
 Identities = 38/269 (14%), Positives = 76/269 (28%), Gaps = 20/269 (7%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQE----TKTEDKNFPFETLQSLN 54
           + + T N +S        +I  LA  I E   D+I LQE     K          L+  N
Sbjct: 1   MKLLTLNCHSWLEEEQLYKIKYLAKTIVEEKYDVIALQEASQSIKAS---IKEGNLKEDN 57

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           Y +    + +        KY  +   +H+  D  +     +     +N+++  I   +  
Sbjct: 58  YGLVLIEEINK---LGGEKYHLVWDYSHIGYDIYEEGLCILTKHKIVNSESFYISKSHCK 114

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
                            +    ++       +              H   +         
Sbjct: 115 TFWRSRKIVKATIDINNENIDFYSCHMGWWHDKEESFTFQVENLLAHAKESKNRAFFMGD 174

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD--SWSKNKG-IRIDHIMLSPE 231
           F        +    +     I       +  S      +   W  N G +RID I  +  
Sbjct: 175 FNNNAFLKNEGYDFLKSNGLIDTYDLAENKDSGVTVNKNIAGWEDNTGELRIDIIFTNRN 234

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
             + ++ +R+    +     SDH  + + 
Sbjct: 235 --TKVYDSRVIFNGKNKEVVSDHFGLEIE 261


>gi|269963240|ref|ZP_06177574.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269832045|gb|EEZ86170.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 317

 Score = 45.9 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 35/272 (12%), Positives = 72/272 (26%), Gaps = 36/272 (13%)

Query: 25  IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEI----- 79
            ++ NPDII LQE  + ++         + Y    C    +     +     + +     
Sbjct: 47  FEQLNPDIIGLQEVFSIEE--TKTFFAEMGYEHFACVDTPHIEGDYICSRPVVAVASRFP 104

Query: 80  ---------------VTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124
                                     +              L +   +L    P  ST  
Sbjct: 105 IESFEAVTFDKDTLNAFGDIDAPPFSRKPVRACVVHPIIGHLSVYVTHLKSQRPADSTTP 164

Query: 125 DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ 184
           ++    I R+L    +  E             +          + +     ++      +
Sbjct: 165 EEASRPIARWLSTQQRGWEAAMLRDVMQRQYALNSMPTVLMGDMNQGITSTSV-NNVLTE 223

Query: 185 KLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL--------- 235
              +      +    +     S     A  +   KG  +D+I+LS E  +          
Sbjct: 224 HYGDSVTDLQLNDGWELQVTPSLESRPATHYHFAKGNVLDYILLSQEFDAHADVSIAEVT 283

Query: 236 ---LHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
              +  A  I+         SDH  V ++++I
Sbjct: 284 NYQVLDAHLINPSFERDKNASDHAFVALTVEI 315


>gi|118377424|ref|XP_001021891.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena
           thermophila]
 gi|89303658|gb|EAS01646.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena
           thermophila SB210]
          Length = 368

 Score = 45.9 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 50/294 (17%), Positives = 90/294 (30%), Gaps = 43/294 (14%)

Query: 4   VTVATWNV---------NSIRAR-IHNLAAWIK----ENNPDIICL----QETKTEDKNF 45
           + + T+NV         N I +R        I+    E +PD++ L    QE K  D   
Sbjct: 35  LKIGTYNVLFGMPSKILN-IYSRNKKRFTHIIENIIPETDPDVLSLMEVTQEFK--DMLL 91

Query: 46  PFETLQSLNY--HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
               ++   Y  H+    Q+    V ++SK     I            + F      +  
Sbjct: 92  SNPYIRQNYYVSHVSKIYQRRLFEVFVISKQPFTSIYLVDSKQGRYQFSIFHNQE--VWK 149

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
             + I            S +    +       R       +            I      
Sbjct: 150 SFILISTHLWAGEGDFGSRQKQLSLVNQCILDRNFLNSRHIN------DTIKQIANIAIQ 203

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK------ 217
            N II + D    +    +   +   GF D  R  +     Y+ WD   +++        
Sbjct: 204 NNNIILQGDLNLHMRHEDA--YIYENGFIDTYREIYPFQDGYT-WDSAQNNFINSVFIFD 260

Query: 218 NKGIRIDHIMLSPEA-TSLLHSARIDTKPRGWTK--PSDHTPVIVSLDIPEPRK 268
           ++ +R+D I+L        +   +I  K +       SDH  ++  L I E  +
Sbjct: 261 DRRMRLDRILLRKSCNLFQIQDVKILGKEKIGIGLCASDHYLLLSILKINENPQ 314


>gi|301761530|ref|XP_002916188.1| PREDICTED: nocturnin-like [Ailuropoda melanoleuca]
          Length = 452

 Score = 45.9 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 39/265 (14%), Positives = 70/265 (26%), Gaps = 30/265 (11%)

Query: 21  LAAWIKENNPDIICLQETKTEDKNFPFE--TLQSLNYHIETCGQKSYNGVAILSKYQPIE 78
           +   I   +PDI+CLQE    D  F      L  L Y      +         S    +E
Sbjct: 199 ILEEILAYHPDILCLQEV---DHYFDTFQPLLGRLGYQGTFFPKP-------WSPCLDVE 248

Query: 79  IVTHLPGD--DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
                 G           +  +  I    + +    +     +   +   +       L+
Sbjct: 249 HNNGPDGCALFFLQNRFKLVNSANIRLTAMTLKTNQVAIAQTLECKESSRQFCIAVTHLK 308

Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV----RQSFQKLQNMGFT 192
                             N+    H    P+I   D             +   L      
Sbjct: 309 ARPGWERFRSAQGCDLLQNLQNITHGAKVPLIVCGDFNAEPTEEVYKHFASSSLNLSSAY 368

Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA-RIDTKPR----- 246
             + A   +   Y+ W        ++    +D+I  S  A   + SA  + T+ +     
Sbjct: 369 KLLSADGQSEPPYTTWKIRTSGECRHT---LDYIWYSQHAL-RVRSALDLLTEEQIGPNR 424

Query: 247 --GWTKPSDHTPVIVSLDIPEPRKK 269
              +  PSDH  ++      E    
Sbjct: 425 LPSFNYPSDHLSLVCDFSFNEEEPD 449


>gi|299755652|ref|XP_001828796.2| hypothetical protein CC1G_06782 [Coprinopsis cinerea okayama7#130]
 gi|298411320|gb|EAU93062.2| hypothetical protein CC1G_06782 [Coprinopsis cinerea okayama7#130]
          Length = 443

 Score = 45.9 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 30/78 (38%), Gaps = 16/78 (20%)

Query: 4   VTVATWNV--------------NSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPF 47
           + + TWN+              N ++   R   +   I+  + D++CLQE    DK  P 
Sbjct: 65  LKILTWNILAQCLVRRELFPTSNCLKVGQREPMIHQEIQRLDADVLCLQEVDRMDKLGPM 124

Query: 48  ETLQSLNYHIETCGQKSY 65
                 +Y   T  +K +
Sbjct: 125 LEAAGYSYRYATGPKKLH 142


>gi|241997776|ref|XP_002433537.1| hypothetical protein IscW_ISCW001771 [Ixodes scapularis]
 gi|215490960|gb|EEC00601.1| hypothetical protein IscW_ISCW001771 [Ixodes scapularis]
          Length = 104

 Score = 45.9 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)

Query: 4  VTVATWNVNSIRARIHNLAAWIKENNP-DIICLQETKTE 41
          + +  WN   +R+R   L     E  P D++ LQET+T+
Sbjct: 10 IRILQWNCRGLRSRRDELTIRFAELEPCDVLLLQETRTD 48


>gi|168212665|ref|ZP_02638290.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens CPE str. F4969]
 gi|168216494|ref|ZP_02642119.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens NCTC 8239]
 gi|170715660|gb|EDT27842.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens CPE str. F4969]
 gi|182381400|gb|EDT78879.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens NCTC 8239]
          Length = 263

 Score = 45.9 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 38/269 (14%), Positives = 76/269 (28%), Gaps = 20/269 (7%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQE----TKTEDKNFPFETLQSLN 54
           + + T N +S        +I  LA  I E   D+I LQE     K          L+  N
Sbjct: 1   MKLLTLNCHSWLEEEQLYKIKYLAKTIVEEKYDVIALQEASQSVKAS---IKEGNLKEDN 57

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           Y +    + +        KY  +   +H+  D  +     +     +N+++  I   +  
Sbjct: 58  YGLVLIEEINK---LGGEKYHLVWDYSHIGYDIYEEGLCILTKHKIVNSESFYISKSHCK 114

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
                            +    ++       +              H   +         
Sbjct: 115 TFWRSRKIVKATIDINNENIDFYSCHMGWWHDKEESFTFQVENLLAHAKESKNRAFFMGD 174

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD--SWSKNKG-IRIDHIMLSPE 231
           F        +    +     I       +  S      +   W  N G +RID I  +  
Sbjct: 175 FNNNAFLKNEGYDFLKSNGLIDTYDLAENKDSGVTVNKNIAGWEDNTGELRIDIIFTNRN 234

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
             + ++ +R+    +     SDH  + + 
Sbjct: 235 --TKVYDSRVIFNGKNKEVVSDHFGLEIE 261


>gi|149031532|gb|EDL86499.1| similar to putative TRAF and TNF receptor associated protein,
           isoform CRA_d [Rattus norvegicus]
          Length = 184

 Score = 45.9 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 9/44 (20%)

Query: 2   SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQET 38
           S ++  TWN++ +       RAR   + + +   +PD++ LQE 
Sbjct: 118 STISFITWNIDGLDGCNLPERAR--GVCSCLALYSPDVVFLQEV 159


>gi|148700526|gb|EDL32473.1| Traf and Tnf receptor associated protein, isoform CRA_c [Mus
           musculus]
          Length = 232

 Score = 45.9 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 9/44 (20%)

Query: 2   SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQET 38
           S ++  TWN++ +       RAR   + + +   +PD++ LQE 
Sbjct: 122 STISFITWNIDGLDGCNLPERAR--GVCSCLALYSPDVVFLQEV 163


>gi|148700529|gb|EDL32476.1| Traf and Tnf receptor associated protein, isoform CRA_f [Mus
           musculus]
          Length = 188

 Score = 45.9 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 9/44 (20%)

Query: 2   SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQET 38
           S ++  TWN++ +       RAR   + + +   +PD++ LQE 
Sbjct: 122 STISFITWNIDGLDGCNLPERAR--GVCSCLALYSPDVVFLQEV 163


>gi|110802553|ref|YP_697748.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens SM101]
 gi|110683054|gb|ABG86424.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens SM101]
          Length = 263

 Score = 45.9 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 38/269 (14%), Positives = 76/269 (28%), Gaps = 20/269 (7%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQE----TKTEDKNFPFETLQSLN 54
           + + T N +S        +I  LA  I E   D+I LQE     K          L+  N
Sbjct: 1   MKLLTLNCHSWLEEEQLYKIKYLAKTIVEEKYDVIALQEASQSIKAS---IKEGNLKEDN 57

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           Y +    + +        KY  +   +H+  D  +     +     +N+++  I   +  
Sbjct: 58  YGLILIEEINK---LGGEKYHLVWDYSHIGYDIYEEGLCILTKHKIVNSESFYISKSHCK 114

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
                            +    ++       +              H   +         
Sbjct: 115 TFWRSRKIVKATIDINNENIDFYSCHMGWWHDKEESFTFQVENLLAHAKESKNRAFFMGD 174

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD--SWSKNKG-IRIDHIMLSPE 231
           F        +    +     I       +  S      +   W  N G +RID I  +  
Sbjct: 175 FNNNAFLKNEGYDFLKSNGLIDTYDLAENKDSGVTVNKNIAGWEDNTGELRIDIIFTNRN 234

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
             + ++ +R+    +     SDH  + + 
Sbjct: 235 --TKVYDSRVIFNGKNKEVVSDHFGLEIE 261


>gi|1335196|emb|CAA26917.1| unnamed protein product [Homo sapiens]
          Length = 268

 Score = 45.9 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 49/246 (19%), Positives = 83/246 (33%), Gaps = 32/246 (13%)

Query: 33  ICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQA 92
           +C+QET    ++     ++      +  G++   GVAIL   +     T       D + 
Sbjct: 8   LCIQETHLTCRDTHRLEIKGWRNIYQANGKQKKAGVAILVSDKTDFKPT---KIKRDKEG 64

Query: 93  RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG 152
            +I A  +I  + L I N+Y P+       K              +  + +L+   I  G
Sbjct: 65  HYIMAKGSIQEEELTILNIYAPNTGAPRFIKQ-----------VLSDLQRDLDAHTIIMG 113

Query: 153 DYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYA 212
           D+N      D         D       ++    L      D  R  H     Y+F+    
Sbjct: 114 DFNTPLSTLDRSTRQKVNKDI------QELDSALHQADLIDIYRTLHPKSTEYTFFSAPH 167

Query: 213 DSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQD 272
            ++SK      DHI+ S    S        T        SDH+ + + L I   +  Q  
Sbjct: 168 HTYSKT-----DHIVGSKALLSKCKRTETITNCL-----SDHSAIKLELRI--KKLTQNH 215

Query: 273 STSQNM 278
           S +  +
Sbjct: 216 SATWKL 221


>gi|311265022|ref|XP_003130450.1| PREDICTED: protein angel homolog 2-like [Sus scrofa]
          Length = 544

 Score = 45.9 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 18/108 (16%), Positives = 34/108 (31%), Gaps = 5/108 (4%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73
           R  N+   IK  + D++CLQE   ++ ++  E    L+SL YH E   +           
Sbjct: 200 RFPNILKEIKHFDADVLCLQEV--QEDHYGTEIRPSLESLGYHCEYKMRTGKKPDGCAIC 257

Query: 74  YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           ++  +            +              L +        +P   
Sbjct: 258 FKHSKFSLLSVNPVEFFRPNVPLLDRDNVGLVLLLQPKSPSAASPAIC 305


>gi|254470152|ref|ZP_05083556.1| endonuclease/exonuclease/phosphatase family protein [Pseudovibrio
           sp. JE062]
 gi|211960463|gb|EEA95659.1| endonuclease/exonuclease/phosphatase family protein [Pseudovibrio
           sp. JE062]
          Length = 346

 Score = 45.9 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 33/247 (13%), Positives = 73/247 (29%), Gaps = 33/247 (13%)

Query: 18  IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPI 77
              L   I++  PD+I  QET +          ++  Y I    +K  +           
Sbjct: 130 KEALQELIEKRQPDLIVFQETASATPRLQAFLRENYQYAILPPEKKDTDLTVFSKFPLEN 189

Query: 78  EIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF 137
                +PG   +        +  +N    +I    +   +P +  + + + +++    + 
Sbjct: 190 SKRNLVPGLGFNGYIPREFLSADVNVNGRKIQLYAIHPASPRSKRRLNGRTTYVDYVSKH 249

Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA 197
             +       ++                      D    +      + L ++       +
Sbjct: 250 IQKHRTDTPIMVL--------------------GDWNTPVWSDTFQKLLADLKLKTTFTS 289

Query: 198 THDTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTP 256
                  Y     + + +  K  G ++DHI  S +    +    I     G    SDH P
Sbjct: 290 FVPQTTRY-----FINPFLGKVLGSKVDHITSSEKII--IKDLMI-----GEDVGSDHFP 337

Query: 257 VIVSLDI 263
           +  +L I
Sbjct: 338 IFATLHI 344


>gi|126331541|ref|XP_001377893.1| PREDICTED: similar to CCR4 carbon catabolite repression 4-like
           [Monodelphis domestica]
          Length = 376

 Score = 45.9 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 42/266 (15%), Positives = 80/266 (30%), Gaps = 30/266 (11%)

Query: 21  LAAWIKENNPDIICLQETKTEDKNFPFE--TLQSLNYHIETCGQKSYNGVAILSKYQPIE 78
           +   I    PDI+CLQE    D  F      L  L Y      +         S    +E
Sbjct: 124 ILEEILAYQPDILCLQEV---DHYFDTFQPLLSRLGYQGTFFPKP-------WSPCLDVE 173

Query: 79  IVTHLPGD--DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
                 G           +  +  I    + +    +     +   K           L+
Sbjct: 174 HNNGPDGCALFFLQSRFALVNSTNIRLTAMTLKTNQVAIAQTLECRKTGRLFCIAVTHLK 233

Query: 137 FASQR--LELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF--QKLQNMGFT 192
             +        +      +   I Q  +    +  + +A  T EV + F    L      
Sbjct: 234 ARTGWERFRSAQGSDLLQNLQSITQGAEIPLIVCGDFNAEPTEEVYRHFASSSLNLSSAY 293

Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA-RIDTKPR----- 246
             + A   +   Y+ W   +    ++    +D+I  S +A   + SA  + T+ +     
Sbjct: 294 KLLSADGQSEPPYTTWKIRSSGECRHT---LDYIWYSRQAL-HVRSALGLLTEEQIGPNR 349

Query: 247 --GWTKPSDHTPVIVSLDIPEPRKKQ 270
              +  PSDH  ++      E +++ 
Sbjct: 350 LPSFNYPSDHLSLVCDFSFNEDQERP 375


>gi|299756331|ref|XP_001829256.2| inositol phosphorylsphingolipid-phospholipase C [Coprinopsis
           cinerea okayama7#130]
 gi|298411628|gb|EAU92582.2| inositol phosphorylsphingolipid-phospholipase C [Coprinopsis
           cinerea okayama7#130]
          Length = 434

 Score = 45.9 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 43/283 (15%), Positives = 74/283 (26%), Gaps = 27/283 (9%)

Query: 17  RIHNLAAWIKENNPDIICLQET-------KTED---KNFPFETLQ-----SLNYHIETCG 61
           RI  +A  +   N DII LQE        K ++   K  P               I T  
Sbjct: 32  RIEAIAHELSTLNHDIIALQEIWVHSDYQKVQERVSKRLPHAKFFYSGALGAGLAIFTRY 91

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
                 V   S       V           A  +     +    +   +L+   G     
Sbjct: 92  PIISTSVVPYSLNGAPIDVAAGDWFVGKAAASVVILHPILGQVQVFNTHLFAKGGEDGPE 151

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
                ++     F + A Q  E+   +I  GD+N IP        +   +          
Sbjct: 152 FLRAHRLVGAWEFAKLARQAAEVGRYVIALGDFNSIPPTLPMSIILNHASLTDAWTATHP 211

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM-------LSPEATS 234
            ++              H          + A       G R+D+ +        S +   
Sbjct: 212 GYESGPVPKTALEAVERHGITADSPLNTWSAGKRPHGWGKRLDYCLYRQPVRHASDKPVP 271

Query: 235 --LLHSARI---DTKPRGWTKPSDHTPVIVSLDIPEPRKKQQD 272
                  ++   +  P      SDH  +  +L+I        +
Sbjct: 272 NLRATDCKVVFTEHVPGYTFSFSDHFGLEATLEIETSMADMPN 314


>gi|255601665|ref|XP_002537723.1| conserved hypothetical protein [Ricinus communis]
 gi|223515316|gb|EEF24660.1| conserved hypothetical protein [Ricinus communis]
          Length = 287

 Score = 45.9 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 19/38 (50%), Gaps = 4/38 (10%)

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           D + ++ +    L    +D    G T+ SDH P++V L
Sbjct: 253 DFVFVTEDLRMRLRRCEVD----GATRASDHQPILVEL 286



 Score = 39.0 bits (89), Expect = 0.80,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 20/41 (48%), Gaps = 6/41 (14%)

Query: 4  VTVATWNVNSIRARIH--NLAAWIKEN----NPDIICLQET 38
          + + +WNV   R+     NL   + E     + D++C+QE 
Sbjct: 1  MRLISWNVQWGRSAHGDVNLTRTLDEARRLVDFDVLCMQEV 41


>gi|323456026|gb|EGB11893.1| hypothetical protein AURANDRAFT_70680 [Aureococcus anophagefferens]
          Length = 789

 Score = 45.9 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 3/52 (5%)

Query: 214 SWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
            W+ N   RIDH++L+        +  ++   R  +  SDH PV   L + +
Sbjct: 741 CWTHNPLFRIDHVLLNDGLR---RACDVENYRRVESAASDHFPVAFDLTLRD 789


>gi|320158919|ref|YP_004191297.1| putative phospholipase C [Vibrio vulnificus MO6-24/O]
 gi|319934231|gb|ADV89094.1| putative phospholipase C [Vibrio vulnificus MO6-24/O]
          Length = 442

 Score = 45.9 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 33/283 (11%), Positives = 72/283 (25%), Gaps = 43/283 (15%)

Query: 4   VTVATWNVNSIRA-------RIHNLAAWIKENNPDIICLQETKTE-DKNFPFETLQSLNY 55
           + + T+N+ ++ A       R   +  ++K    D++ LQE        F  E  +   Y
Sbjct: 178 LKIMTYNIWALPAIASHIGERFELIPDYVK--GYDVLALQEVFANGRDAFLRELAKEYPY 235

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
             +   +  +N             + +                         I       
Sbjct: 236 QTKMLDKDGFNIFDGGVIIVSRYPIVNQAQFIFPDCTGTDCFADKGVNYAEVIK------ 289

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
                   +    +          ++ + ++    A    I       Y+     N    
Sbjct: 290 -GGEAYHVFATHTASYDTDTARDYRQRQFKQMRALAQSLKIPANETVVYSGDFNVNK--- 345

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYS--FWDYYADSWS-------KNKGIRIDHI 226
                              + A    +  Y+   +D   ++++       +N    +D++
Sbjct: 346 ------RKFPGDYQQMIANLSAIEPHYSGYTESTFDPRINNFAGEPLSGGENVEY-LDYV 398

Query: 227 MLSPEAT---SLLHSARIDT----KPRGWTKPSDHTPVIVSLD 262
           M+S E        +   I              SDH PV   L 
Sbjct: 399 MVSNEYAVKGDNNNRVDIPRSTAESLWKHYNLSDHFPVSTVLK 441


>gi|302144127|emb|CBI23232.3| unnamed protein product [Vitis vinifera]
          Length = 961

 Score = 45.9 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 38/294 (12%), Positives = 73/294 (24%), Gaps = 58/294 (19%)

Query: 1   MSVVTVATWNVNSIR------ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           +S + + ++NV   R       R+  L   I+ ++PD+IC QE                 
Sbjct: 690 LSSLKILSYNVW-FREDLEMDKRMQALGDLIQLHSPDLICFQEV------------TPNI 736

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           Y +                              L  +      +    +    I    L 
Sbjct: 737 YDVFQQSCW---WKVYRCSVPNEMAHLRPYFCMLLSKLPVKSFSCKRFSN--SIMGRELC 791

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
                        ++         +     +       D           NP +      
Sbjct: 792 IAELEVQAGKPLVLATSHLESPCPAPPKWDQMYSKERVDQAKEALNLLTKNPNVIFGGDM 851

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI--RIDHIMLSPEA 232
              E       L +    DA        + +++        S N+ +  R+D  M     
Sbjct: 852 NWDEKSDGQFPLPDGWV-DAWADLRPGENGWTYDTKSNQMLSGNRTLQKRLDRFMC---- 906

Query: 233 TSLLHSARI------------------DTKPRGWTK-------PSDHTPVIVSL 261
              LH  +I                  + K R   +       PSDH  +++++
Sbjct: 907 --RLHDFKISKIDMIGMEPIPGLSYCKEKKVRKEMQQLVLPVLPSDHYGLLLTI 958


>gi|325106309|ref|YP_004275963.1| Endonuclease/exonuclease/phosphatase [Pedobacter saltans DSM 12145]
 gi|324975157|gb|ADY54141.1| Endonuclease/exonuclease/phosphatase [Pedobacter saltans DSM 12145]
          Length = 287

 Score = 45.9 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 30/247 (12%), Positives = 62/247 (25%), Gaps = 11/247 (4%)

Query: 21  LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80
           ++  IK    DI+  QE          + L +   +          G      Y+  +  
Sbjct: 52  ISDIIKFYEFDILGTQEGFAHQLEDLKKVLPNYGEYGVGRDDGKNTGEQSAIFYRKDKFD 111

Query: 81  THLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQ 140
               G     +     +      +  R+ +  L          Y              + 
Sbjct: 112 LLDSGSFWLSETPEKPSFGWDAQKYRRVCSWILLKDKKTKKKLY-----CYNAHYDHQAN 166

Query: 141 RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHD 200
               E   +       + +         +  +               N+ F    +    
Sbjct: 167 IARKESSKLILEKIKNMRKGTPVILTGDFNGNPST---EWYKEIAQSNVLFDTYSQTPIK 223

Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
                ++ +Y  ++        IDHI  + +    +    I +       PSDH PVI  
Sbjct: 224 LEGNPTYQEY-GNAELLKGNDVIDHIFTTKDF--KVKKWGILSNTFHGKYPSDHFPVITF 280

Query: 261 LDIPEPR 267
           L+    +
Sbjct: 281 LEWNSKK 287


>gi|149914631|ref|ZP_01903161.1| endonuclease/exonuclease/phosphatase family protein [Roseobacter
           sp. AzwK-3b]
 gi|149811424|gb|EDM71259.1| endonuclease/exonuclease/phosphatase family protein [Roseobacter
           sp. AzwK-3b]
          Length = 210

 Score = 45.9 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 36/253 (14%), Positives = 62/253 (24%), Gaps = 48/253 (18%)

Query: 22  AAWIKENNPDIICLQET--KT--EDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPI 77
              I     D++ LQE   +        P + ++   +HI   GQ   +           
Sbjct: 1   MRVINALQADVVVLQEVDKRLAPRPAALPHDMVEEEGWHILPFGQPGGSL---------- 50

Query: 78  EIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF 137
                             +    I T  + +  L                +  I   L  
Sbjct: 51  --------GWHGNAMLVRDGVQAIETAHIELPGLEPRGAIRADLDTPIGALRVIGLHLGL 102

Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA 197
             +   L+   I      + P P           +        +  + L       A R 
Sbjct: 103 VRRYRLLQLGAINRALRQLPPMPTVFAGDFNEWGNGAALDAAVKLVRFLPAAASYPAPRP 162

Query: 198 THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257
                                    +D I LSP+      S+ +    R     SDH PV
Sbjct: 163 VAP----------------------LDRIALSPDLL--ALSSGVHRG-RPAHIASDHLPV 197

Query: 258 IVSL-DIPEPRKK 269
              L  +P+  ++
Sbjct: 198 WADLAALPQKGRE 210


>gi|36030946|ref|NP_653168.2| protein angel homolog 2 [Homo sapiens]
 gi|114572546|ref|XP_514187.2| PREDICTED: hypothetical protein isoform 2 [Pan troglodytes]
 gi|74746929|sp|Q5VTE6|ANGE2_HUMAN RecName: Full=Protein angel homolog 2
 gi|55665690|emb|CAH71920.1| angel homolog 2 (Drosophila) [Homo sapiens]
 gi|119613772|gb|EAW93366.1| angel homolog 2 (Drosophila), isoform CRA_b [Homo sapiens]
 gi|221040606|dbj|BAH11980.1| unnamed protein product [Homo sapiens]
          Length = 544

 Score = 45.9 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 5/63 (7%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73
           R  N+   IK  + D++CLQE   ++ ++  E    L+SL YH E   +           
Sbjct: 200 RFPNILKEIKHFDADVLCLQEV--QEDHYGAEIRPSLESLGYHCEYKMRTGRKPDGCAIC 257

Query: 74  YQP 76
           ++ 
Sbjct: 258 FKH 260


>gi|2251234|gb|AAB62717.1| probable nocturnin protein [Mus musculus]
          Length = 323

 Score = 45.9 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 35/262 (13%), Positives = 68/262 (25%), Gaps = 28/262 (10%)

Query: 21  LAAWIKENNPDIICLQETKTEDKNFPFE--TLQSLNYHIETCGQKSYNGVAILSKYQPIE 78
           +   I    PDI+CLQE    D  F      L  L Y      +         S    +E
Sbjct: 71  ILEEILAYQPDILCLQEV---DHYFDTFQPLLSRLGYQGTFFPKP-------WSPCLDVE 120

Query: 79  IVTHLPGD--DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
                 G           + ++  I    + +    +     +   +   +       L+
Sbjct: 121 HNNGPDGCALFFLQNRFKLISSTNIRLTAMTLKTNQVAIAQTLECKESGRQFCIAVTHLK 180

Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN----MGFT 192
             +               N+         P+I   D               +        
Sbjct: 181 ARTGWERFRSAQGCDLLQNLQNITQGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAY 240

Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR------ 246
             +     +   Y+ W        ++    +D+I  S  A S+  +  + T+ +      
Sbjct: 241 KLLSPDGQSEPPYTTWKIRTSGECRHT---LDYIWYSRHALSVTSALDLLTEEQIGPNRL 297

Query: 247 -GWTKPSDHTPVIVSLDIPEPR 267
             +  PSDH  ++      E  
Sbjct: 298 PSFHYPSDHLSLVCDFSFNEEP 319


>gi|323138553|ref|ZP_08073621.1| Endonuclease/exonuclease/phosphatase [Methylocystis sp. ATCC
          49242]
 gi|322396187|gb|EFX98720.1| Endonuclease/exonuclease/phosphatase [Methylocystis sp. ATCC
          49242]
          Length = 319

 Score = 45.9 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 16/54 (29%)

Query: 1  MSVVTVATWNVNSI-------------RARIHNLAAWIKENNPDIICLQETKTE 41
          M+ + +AT+N+ ++             RA    L   + + + DI+CLQE   +
Sbjct: 1  MNEMRLATFNLENLDWAPGRPEAFARRRAA---LLPLLDDIDADILCLQEIDAQ 51



 Score = 36.3 bits (82), Expect = 4.8,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 18/49 (36%), Gaps = 7/49 (14%)

Query: 223 IDHIMLSPEATSLLHSARIDT----KPRGWTKPSD---HTPVIVSLDIP 264
           IDHI+ S    ++  S  I             P D   H PV+   +I 
Sbjct: 270 IDHILASHALAAMWRSTAILNAGLQDEFYAKDPIDGSLHAPVMAMFEIS 318


>gi|262383334|ref|ZP_06076470.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. 2_1_33B]
 gi|262294232|gb|EEY82164.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. 2_1_33B]
          Length = 304

 Score = 45.9 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 39/283 (13%), Positives = 91/283 (32%), Gaps = 35/283 (12%)

Query: 2   SVVTVATWNV--NSIRARIH--NLAAWIKENNPDIICLQETKTEDKN------FPFETLQ 51
           + V V+++N+  N++  ++     A  I+ +  DI+ +QE    +++       P E  +
Sbjct: 26  ATVKVSSFNIWLNTLGGKLPPSQTAKVIEASQTDIVGIQEGHIYEEDGIKHDHVP-EIAE 84

Query: 52  SLNYHIETCGQKSYN-------GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
           SL +H+   G+  Y                  I++         +    +I         
Sbjct: 85  SLGFHLFNQGEGHYILSRYPVVDSTASRYGVKIQVGKDKFCWMFNCHLYYIPYQPYQLNG 144

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
                  ++           + +   + R+ +   Q ++   P+   GD+N        +
Sbjct: 145 IPYGDYPFIDTEEEAVWFANEARREEVTRYQKDIQQVMKEGYPVFLTGDFNEP--SFLDW 202

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH---HLYSFWDYYADSWSKNKGI 221
                +           + +    +G  D+ R  H        Y++    ++    +   
Sbjct: 203 TQRAADAGIHKIKVEWPATKAFSEIGMNDSYRTIHPDEVSTPGYTWTPVPSEQEILD--- 259

Query: 222 RIDHIMLSPEATSLLHSARI------DTKPRGWTKPSDHTPVI 258
           R+D ++ S      +  + I       +       PSDH  V 
Sbjct: 260 RLDFVLYSG---CKVTDSFITGESEATSDVVVSPYPSDHRMVT 299


>gi|114321996|ref|YP_743679.1| endonuclease/exonuclease/phosphatase [Alkalilimnicola ehrlichii
           MLHE-1]
 gi|114228390|gb|ABI58189.1| Endonuclease/exonuclease/phosphatase [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 276

 Score = 45.9 bits (107), Expect = 0.007,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 33/96 (34%), Gaps = 14/96 (14%)

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
                   +     +  +     D        H L++F  +      +N    IDHI+LS
Sbjct: 189 HRHVIVMGDFNCHSRSPEFTTLVDRTELLEPVHDLHTFPSWKP---QRN----IDHILLS 241

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
                 +   R+   P      SDH P+ + + +PE
Sbjct: 242 SSLE--VGHVRVLDYPL-----SDHLPITMDISLPE 270


>gi|306829190|ref|ZP_07462380.1| RgfB protein [Streptococcus mitis ATCC 6249]
 gi|304428276|gb|EFM31366.1| RgfB protein [Streptococcus mitis ATCC 6249]
          Length = 271

 Score = 45.5 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 29/272 (10%), Positives = 73/272 (26%), Gaps = 14/272 (5%)

Query: 4   VTVATWNVNSI--RARIHNLAAWIKEN---NPDIICLQETK-------TEDKNFPFETLQ 51
           +   T N +S   +         +++    + D+IC QE          E  +       
Sbjct: 1   MKFLTLNTHSWMEKEAEEKFQLLLQDILDKDYDLICFQEINQEITSPEVEVNDLYQALPA 60

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
           +   H +   +     +A   +        +  G D   +   I +   I  + + + ++
Sbjct: 61  AEPIHQDHYVRLLVEKLAEKGRSYYWTWAYNHIGYDRYHEGVAILSKTPIEAREILVSDV 120

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
             P           +     K     +      ++                    ++  +
Sbjct: 121 DDPTDYHTRRVALVETEVEGKELALASVHLSWWDKGFQEEWARFEAVLKDLKKPLLLAGD 180

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
                 +          +   DA     +    Y+            + +RID++  + E
Sbjct: 181 FNNPAGQEGYQAILASPLELQDAFEVAKERSGSYTVPPEIDGWKGNTEPLRIDYVFTTKE 240

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
               + S  +    +   + SDH  +   L+ 
Sbjct: 241 LE--VESLHVVFDGQNGPQVSDHYGLNAILNW 270


>gi|168204400|ref|ZP_02630405.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens E str. JGS1987]
 gi|170663976|gb|EDT16659.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens E str. JGS1987]
          Length = 263

 Score = 45.5 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 37/269 (13%), Positives = 75/269 (27%), Gaps = 20/269 (7%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQE----TKTEDKNFPFETLQSLN 54
           + + T N +S        +I  LA  I E   D+I LQE     K          L+  N
Sbjct: 1   MKLLTLNCHSWLEEEQLYKIKYLAKIIVEEKYDVIALQEASQSIKAS---IKEGNLKEDN 57

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           Y +    +          +Y  +   +H+  D  +     +     +N+++  I   +  
Sbjct: 58  YGLILIEEIKK---LGGEEYHLVWDYSHIGYDIYEEGLCILTKHKIVNSESFYISKSHSK 114

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
                            +    ++       +              H   +         
Sbjct: 115 TFWRSRKIVKATIDINNENIDFYSCHMGWWHDKDESFTFQVENLLAHAKESKNRAFFMGD 174

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD--SWSKNKG-IRIDHIMLSPE 231
           F        +    +     I       +  S      +   W  N G +RID I  +  
Sbjct: 175 FNNNAFLKNEGYDFLKSNGLIDTYDLAENKDSGVTVNKNIAGWEDNTGELRIDIIFTNRN 234

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
             + ++ +R+    +     SDH  + + 
Sbjct: 235 --TKVYDSRVIFNGKNKEVVSDHFGLEIE 261


>gi|325108266|ref|YP_004269334.1| endonuclease/exonuclease/phosphatase [Planctomyces brasiliensis DSM
           5305]
 gi|324968534|gb|ADY59312.1| Endonuclease/exonuclease/phosphatase [Planctomyces brasiliensis DSM
           5305]
          Length = 320

 Score = 45.5 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 35/266 (13%), Positives = 73/266 (27%), Gaps = 24/266 (9%)

Query: 11  VNSIRARIHNLAAWIKENNPDIICLQET--KTEDKNFPFETLQSLNY-HIETCGQKSYNG 67
           VNS+R R+   A  I+  N DI+ L E   +          L +  Y H+     +   G
Sbjct: 60  VNSVRERMGKDAEVIRHLNADILGLAEVENRALLNRLVKGYLSNEGYKHVVLIEGEDSRG 119

Query: 68  VAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDK 127
           + +    +       +  + L         +       + + +            + +  
Sbjct: 120 IDVALLSRFPCFAQSVDIEGLPRDLLACRFSMRGQVFYVVVNHWKSRRDGGGGDVRLNGG 179

Query: 128 ISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQ 187
            +  +   R   +      P+I  GD+N  P+             +      ++    L 
Sbjct: 180 RAMQEFVSRTVREYEGQAVPVIAMGDFNDEPEDASFAPMRQAGMVSTMDSLAQEDRWTLG 239

Query: 188 NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML-SPEATSLLH--------S 238
                 +         +     +   +  ++ G+R     + +                 
Sbjct: 240 YYDRDASRMDLLCFDQI-----WITPNLQQSPGMR----WVRTEVVRPRFMINDRRQFNG 290

Query: 239 ARI---DTKPRGWTKPSDHTPVIVSL 261
            RI       R     SDH PV  + 
Sbjct: 291 VRIPLPIDDYRDRIGYSDHYPVKATF 316


>gi|296116207|ref|ZP_06834825.1| Endonuclease/exonuclease/phosphatase [Gluconacetobacter hansenii
           ATCC 23769]
 gi|295977313|gb|EFG84073.1| Endonuclease/exonuclease/phosphatase [Gluconacetobacter hansenii
           ATCC 23769]
          Length = 234

 Score = 45.5 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 44/129 (34%), Gaps = 11/129 (8%)

Query: 2   SVVTVATWNVNSIR---ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           + + V +WN+  +R   A + ++   I +  PD++ +QE   +    P        ++  
Sbjct: 33  NSIRVVSWNL--LRQIGATVRDIVHLIHQEKPDLLLMQEATVDIDALPTLIG---GHYAR 87

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
           +      +GVA  S +             L            I      I N++L HG  
Sbjct: 88  SPLPGRIHGVACWSPWPY---RRPPMTCTLPSGTLIRRVAQIIECGPFAIANVHLSHGQL 144

Query: 119 ITSTKYDDK 127
           +   +    
Sbjct: 145 LNRRQLRRM 153


>gi|262282134|ref|ZP_06059903.1| RgfB [Streptococcus sp. 2_1_36FAA]
 gi|262262588|gb|EEY81285.1| RgfB [Streptococcus sp. 2_1_36FAA]
          Length = 271

 Score = 45.5 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 31/252 (12%), Positives = 70/252 (27%), Gaps = 13/252 (5%)

Query: 18  IHNLAAWIKENNPDIICLQETK--TEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75
           ++ LA  I +   D+ICLQE     E +                  Q  +    +    +
Sbjct: 21  LNQLAERILQEKYDVICLQEVNQLMESEQVVQAPFYQAVEGAIAIHQDHFALCLVKKLTE 80

Query: 76  PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKR-- 133
                      +      + E    ++   L    + +   N          +       
Sbjct: 81  AGLDYHWSWAYNHIGFDIYNEGVTILSKNPLTPKEVLVSEVNDPRDYHTRKVLLAETEVE 140

Query: 134 -FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192
             L   +          F G+++ + +        +            + +Q +  +   
Sbjct: 141 GQLMTIASCHLSWWDKGFQGEWSKLEEELVKVKTPLVLMGDFNNPVDYEGYQHI--LKSP 198

Query: 193 DAIRATHDTHHLYSFWDYYADS---WSKNK-GIRIDHIMLSPEATSLLHSARIDTKPRGW 248
             ++ +H      S       +   W  N+  ++ID+I  S      + S+ +    +  
Sbjct: 199 LKLQDSHKVARKISGKATVEGAIAGWDGNQDALKIDYIFTSQGI--QIESSAVVFDGKET 256

Query: 249 TKPSDHTPVIVS 260
              SDH  + V 
Sbjct: 257 PVVSDHFGIEVE 268


>gi|148703245|gb|EDL35192.1| CCR4 carbon catabolite repression 4-like (S. cerevisiae), isoform
           CRA_a [Mus musculus]
          Length = 609

 Score = 45.5 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 35/262 (13%), Positives = 68/262 (25%), Gaps = 28/262 (10%)

Query: 21  LAAWIKENNPDIICLQETKTEDKNFPFE--TLQSLNYHIETCGQKSYNGVAILSKYQPIE 78
           +   I    PDI+CLQE    D  F      L  L Y      +         S    +E
Sbjct: 357 ILEEILAYQPDILCLQEV---DHYFDTFQPLLSRLGYQGTFFPKP-------WSPCLDVE 406

Query: 79  IVTHLPGD--DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
                 G           + ++  I    + +    +     +   +   +       L+
Sbjct: 407 HNNGPDGCALFFLQNRFKLISSTNIRLTAMTLKTNQVAIAQTLECKESGRQFCIAVTHLK 466

Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN----MGFT 192
             +               N+         P+I   D               +        
Sbjct: 467 ARTGWERFRSAQGCDLLQNLQNITQGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAY 526

Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR------ 246
             +     +   Y+ W        ++    +D+I  S  A S+  +  + T+ +      
Sbjct: 527 KLLSPDGQSEPPYTTWKIRTSGECRHT---LDYIWYSRHALSVTSALDLLTEEQIGPNRL 583

Query: 247 -GWTKPSDHTPVIVSLDIPEPR 267
             +  PSDH  ++      E  
Sbjct: 584 PSFHYPSDHLSLVCDFSFNEEP 605


>gi|281340342|gb|EFB15926.1| hypothetical protein PANDA_005445 [Ailuropoda melanoleuca]
          Length = 525

 Score = 45.5 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 5/63 (7%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73
           R  N+   IK  + D++CLQE   ++ ++  E    L+SL YH E   +           
Sbjct: 181 RFPNILKEIKHFDADVLCLQEV--QEDHYGAEIRPSLESLGYHCEYKMRTGRKPDGCAIC 238

Query: 74  YQP 76
           ++ 
Sbjct: 239 FKH 241


>gi|254458118|ref|ZP_05071544.1| endonuclease/exonuclease/phosphatase [Campylobacterales bacterium
           GD 1]
 gi|207084954|gb|EDZ62240.1| endonuclease/exonuclease/phosphatase [Campylobacterales bacterium
           GD 1]
          Length = 336

 Score = 45.5 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 45/290 (15%), Positives = 80/290 (27%), Gaps = 64/290 (22%)

Query: 18  IHNLAAWIKENNPDIICLQETKTED--KNFPFETLQ---SLNYHIETCGQKSYNGVAILS 72
           + N+A  IK+ + DII LQE  +    K+  F   Q      Y+     + +   VAILS
Sbjct: 60  LQNIARVIKDIDADIIALQEIHSLQALKDLRFTLKQNGLYYQYYSIADKKHTAIKVAILS 119

Query: 73  KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH---------------GN 117
           K         L           +E    I    L +   +                   N
Sbjct: 120 KLPFTY-SKELSVTSTYKYRNILETKLKIYGNDLYMFVNHWKAKSGPESMRITSAKSLRN 178

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
            I+   YD+ I  +  F     + ++ ++              H        +  +    
Sbjct: 179 RISEIGYDENIVLLGDFNSDYEEHIKFKKNRKLNDTNGKTGINHVLRTIKQNQKASNTKY 238

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL-- 235
           E    +    +           D  + YS+  +  +  +      +D+I++S        
Sbjct: 239 EKENLYNLWYDT----------DAPNRYSYI-FRGEKEA------LDNIIVSQPLLDKKG 281

Query: 236 ----------------LHSARIDTKPRGWTK--------PSDHTPVIVSL 261
                               +I        +         SDH PVI   
Sbjct: 282 ISYINDSITNLDKEYLFKKKQIYRWQVSKERVPKHKGAGYSDHLPVIAKF 331


>gi|315185421|gb|EFU19193.1| Endonuclease/exonuclease/phosphatase [Spirochaeta thermophila DSM
           6578]
          Length = 311

 Score = 45.5 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 31/269 (11%), Positives = 69/269 (25%), Gaps = 48/269 (17%)

Query: 17  RIHNLAAWIKENNPDIICLQET---KTEDKNFPFETLQSLNYHIETCGQKS---YNGVAI 70
           R+  ++  ++  + D++ LQE    +          L    Y      ++    +  V  
Sbjct: 60  RLEAVSRVVRSLDADVLILQEVENERVL-GRLVSGYLADAGYRWHFLPEEEGAVHVAVLS 118

Query: 71  LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISW 130
               + + +          +++           Q    G   +    P    +      +
Sbjct: 119 RIPVEGVRVHALKDPRVAVLRSVVEVEYRLGGEQVFLFGVHLISRAGPAWRDEIRRNQLF 178

Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG 190
           +        +R      ++  GD+N+     + +           ++        + +  
Sbjct: 179 LIARRLEEIRRTAPGAHVLVGGDFNMEADEVETFFDRALFPQDVHSVWSMMVPGTMPSG- 237

Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS----LLHSARI----- 241
                          S+W  Y   W      RID    +          +    +     
Sbjct: 238 ---------------SYW--YEGRWE-----RIDGFFFTEGLRDGVGLDVTGGEVMAFPW 275

Query: 242 DTKPRG---------WTKPSDHTPVIVSL 261
               RG          +  SDH PV V L
Sbjct: 276 LLDERGRPWSWDMGTGSGYSDHLPVKVIL 304


>gi|227819964|ref|YP_002823935.1| endonuclease/exonuclease/phosphatase family protein [Sinorhizobium
           fredii NGR234]
 gi|36958668|gb|AAQ87136.1| Dioxygenase [Sinorhizobium fredii NGR234]
 gi|227338963|gb|ACP23182.1| putative Endonuclease/Exonuclease/phosphatase family protein
           [Sinorhizobium fredii NGR234]
          Length = 264

 Score = 45.5 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 24/56 (42%), Gaps = 3/56 (5%)

Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQ 276
           +R+DH+ +       +    + +        SDH P++  L++  P ++     +Q
Sbjct: 201 LRLDHVFVGDGI--NVGDCTVHSSALARV-ASDHLPILAELEVEPPVRQWAPRAAQ 253


>gi|58532025|emb|CAD41563.3| OSJNBa0006A01.18 [Oryza sativa Japonica Group]
          Length = 1189

 Score = 45.5 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/271 (12%), Positives = 81/271 (29%), Gaps = 34/271 (12%)

Query: 6   VATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + +WNV  +   AR + +   + +    + C QETK +  +          Y ++    K
Sbjct: 7   LISWNVRGLNSPARCNVVHELMLDTKCTLACFQETKLQSIDDGLARFLG-GYKLDKFAFK 65

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
              G               +    +   +   + T   +  T  +  +Y P  + +  + 
Sbjct: 66  PARGTRGGILLLWSSGDFDVQEVRIGRFSISAQITDIRSGVTFLLTGVYGPTRHHLKDSF 125

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
                                           +I    +       +N++   L   + F
Sbjct: 126 LRHIRRLRPSPGEGW-----------------LILGDFNMIYRARDKNNSNLNLARMRRF 168

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           + + +      I   +     +++    ++   K   +++D    + E         +  
Sbjct: 169 RAVIDRCELHEIPLQN---RKFTW----SNERRKATLVKLDRCFCNEEWDLAFPHHVLHA 221

Query: 244 KPRGWTKPSDHTPVIVSLDIPEPRKKQQDST 274
            P G   PSDH P++    +  P+   +  T
Sbjct: 222 LPTG---PSDHYPLV----LSNPQGPHRPRT 245


>gi|73960892|ref|XP_547407.2| PREDICTED: hypothetical protein XP_547407 [Canis familiaris]
          Length = 544

 Score = 45.5 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 5/63 (7%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73
           R  N+   IK  + D++CLQE   ++ ++  E    L+SL YH E   +           
Sbjct: 200 RFPNILKEIKHFDADVLCLQEV--QEDHYGAEIRPSLESLGYHCEYKMRTGRKPDGCAIC 257

Query: 74  YQP 76
           ++ 
Sbjct: 258 FKH 260


>gi|254229945|ref|ZP_04923347.1| endonuclease/exonuclease/phosphatase family [Vibrio sp. Ex25]
 gi|262394659|ref|YP_003286513.1| putative phospholipase C [Vibrio sp. Ex25]
 gi|151937514|gb|EDN56370.1| endonuclease/exonuclease/phosphatase family [Vibrio sp. Ex25]
 gi|262338253|gb|ACY52048.1| putative phospholipase C [Vibrio sp. Ex25]
          Length = 442

 Score = 45.5 bits (106), Expect = 0.007,   Method: Composition-based stats.
 Identities = 39/283 (13%), Positives = 82/283 (28%), Gaps = 43/283 (15%)

Query: 4   VTVATWNVNSIRA-------RIHNLAAWIKENNPDIICLQETKTE-DKNFPFETLQSLNY 55
           + + T+N+ ++ A       R   +  ++K    D++ LQE      + F  E  +   Y
Sbjct: 178 LKLMTYNIWALTAIASHIGDRYELIPQYVK--GYDVLALQEVFASGREAFLRELAKEYPY 235

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
             +   ++  N             + +         +               I      H
Sbjct: 236 QTKMLDKEGVNIHDGGVIIVSRYPIVNEAQYVFPDCSGTDCFADKGVNYAEIIKGGQAYH 295

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
                +  +D   +   R         + ++    A   NI       Y+     N    
Sbjct: 296 VFATHTASFDTDTAREYRQ-------RQFKQIRALAKSLNIPSSETVVYSGDFNVNK--- 345

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYS--FWDYYADSWS-------KNKGIRIDHI 226
                              + A    +  Y+   +D   ++++       +N    +D++
Sbjct: 346 ------RKFPGDYQQMIANLSAIEPQYSGYTESTFDPRINNFAGEALSGGENVEY-LDYV 398

Query: 227 MLSPEA-TSLLHSARID----TKPRGWTK--PSDHTPVIVSLD 262
           M+S E      +  R+D    T    W     SDH PV  ++ 
Sbjct: 399 MVSSEYGVKSFNDNRVDVPRTTSESLWKHYNLSDHFPVSATIK 441


>gi|327441388|dbj|BAK17753.1| predicted extracellular nuclease [Solibacillus silvestris StLB046]
          Length = 1177

 Score = 45.5 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 30/77 (38%), Gaps = 10/77 (12%)

Query: 200  DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT---KPSDHTP 256
                 +S++      +  N  + +DHI++S     +     I           + SDH P
Sbjct: 997  PVEDRFSYY------FQGNNQV-LDHILVSNNLAEVTEIDMIHINANFTEAQGRASDHDP 1049

Query: 257  VIVSLDIPEPRKKQQDS 273
            V+V +D+   + +  + 
Sbjct: 1050 VLVQIDLKSGKDETPEP 1066


>gi|242825122|ref|XP_002488375.1| hypothetical protein TSTA_108090 [Talaromyces stipitatus ATCC
           10500]
 gi|218712193|gb|EED11619.1| hypothetical protein TSTA_108090 [Talaromyces stipitatus ATCC
           10500]
          Length = 169

 Score = 45.5 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 18/58 (31%), Gaps = 4/58 (6%)

Query: 209 DYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEP 266
            +       +    ID I+ S      +    I     G    SDH  +    D+P P
Sbjct: 110 TWQGRGQGGDYKSTIDLILASENLIDSIVKCAIH----GTEHSSDHRAIETVFDVPRP 163


>gi|162147750|ref|YP_001602211.1| endonuclease/exonuclease/phosphatase family protein
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|209542375|ref|YP_002274604.1| endonuclease/exonuclease/phosphatase [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|161786327|emb|CAP55909.1| putative endonuclease/exonuclease/phosphatase family
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|209530052|gb|ACI49989.1| Endonuclease/exonuclease/phosphatase [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 235

 Score = 45.5 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 33/261 (12%), Positives = 66/261 (25%), Gaps = 68/261 (26%)

Query: 5   TVATWNVNSIR---ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
            + +WN+  +R   A   ++   I++  PD++ +QE      +F         ++  +  
Sbjct: 35  KIVSWNL--LRLVGASPRDVIHLIEQERPDLLLMQE---ATSDFDALPHLIGGHYARSPL 89

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
               +GVA  S                 +  R  +      +    + N++L HG  +  
Sbjct: 90  PGRIHGVACWSPSPFRRQPLTCTLPSGPLVRRVAQM-IECASFAFTVANVHLSHGQIMNR 148

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            +       +            +           ++P   D                   
Sbjct: 149 RQLRRLGEILPAHAAVLGDFNLVGPT--------LMPHFRDVGPRAPTHRMVDMVP---- 196

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
                                                  IRID  ++          AR+
Sbjct: 197 ---------------------------------------IRIDRCLV-RGL--SCTEARV 214

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
                     SDH P+ V L+
Sbjct: 215 LDNYT-----SDHCPITVRLE 230


>gi|71281061|ref|YP_269348.1| extracellular ribonuclease/nuclease fusion protein [Colwellia
            psychrerythraea 34H]
 gi|71146801|gb|AAZ27274.1| extracellular ribonuclease/nuclease fusion protein [Colwellia
            psychrerythraea 34H]
          Length = 1310

 Score = 45.5 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 55/325 (16%), Positives = 95/325 (29%), Gaps = 77/325 (23%)

Query: 4    VTVATWNV----NS-------IRAR-IHNLAAW----------IKENNPDIICLQETKTE 41
            + VA++NV    N          AR    L  +          +KE N DI+ L E   E
Sbjct: 932  LKVASFNVLNYFNGDGAGQGFPTARGADTLEEFTRQSSKIVSALKEINADIVGLME--LE 989

Query: 42   DKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI 101
            +  F   +       I    ++  + V   +        T + GD + V   +  AT  I
Sbjct: 990  NDGFDSNSA------IADLVKQLNSQVGEGTYNYVSLDQTGVGGDAIAVGIIYKPATVGI 1043

Query: 102  NTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161
                +         GN     +   +I+  +      +           +G+        
Sbjct: 1044 VGNAVTTNQSPFDFGNRQPLVQTFKEIASNEELTIAVNHFKSKGSCGSASGNNLDQGDGQ 1103

Query: 162  DCYNP-----------IIWENDACFTLEVRQSFQKLQNMGFTDAIR-----ATHDTHHLY 205
             C+N             +       + +       L   G  D I        H+    Y
Sbjct: 1104 GCWNELRTQAANGLTAWLNTKPTGTSDDDFLIIGDLNAYGKEDPINAITNSNYHNLVADY 1163

Query: 206  ---SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT----KPR------------ 246
               + + Y   S+    G  +DH + S +  S +    +      +PR            
Sbjct: 1164 MGSTGYSY---SFGGEIGY-LDHALASDKLASQVVDTTVWHINADEPRIFDYNTEYKSSE 1219

Query: 247  --------GWTKPSDHTPVIVSLDI 263
                       + SDH PVIV L++
Sbjct: 1220 QLSTYFAEDAYRASDHDPVIVVLNL 1244


>gi|257453584|ref|ZP_05618874.1| endonuclease/exonuclease/phosphatase [Enhydrobacter aerosaccus
           SK60]
 gi|257449042|gb|EEV23995.1| endonuclease/exonuclease/phosphatase [Enhydrobacter aerosaccus
           SK60]
          Length = 262

 Score = 45.5 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 35/272 (12%), Positives = 75/272 (27%), Gaps = 35/272 (12%)

Query: 2   SVVTVATWNV-------NSIR-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + + + ++N+       N  R  ++  +AA + +   DIICLQE + ++          L
Sbjct: 13  NSLIITSYNIHKGMSPLN--RFVKMEGIAAALDQVQSDIICLQEVQGQN----------L 60

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLP--GDDLDVQARFIEATFTINTQTLRIGNL 111
              ++       +      +Y  +E         +        +          + I   
Sbjct: 61  KRVVKYNEFPDQSQHEWFGEYLQLENSYGKNVEYNHGHHGNAVLSRHPLDPKHNVNITVS 120

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
            L     +               L      +E +    +      I    D   P+I   
Sbjct: 121 RLEQRGVLHCEIQPIGWHTPIIVLCAHLNLMENDREKQYEVMSQYINNEIDQSTPLILAG 180

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
           D     ++               +         +          +K   + +D I +   
Sbjct: 181 DFNDWKKLSCQKLGCDLNLQEAVLTHHGKLLPTF---------PAKLPVLSLDRIYV-RN 230

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
               +H A +      W+  SDH PV   + +
Sbjct: 231 L--QVHRAWVHKGQ-PWSNLSDHLPVSAEVSL 259


>gi|298229615|ref|ZP_06963296.1| metal-dependent hydrolase [Streptococcus pneumoniae str. Canada
           MDR_19F]
 gi|298255811|ref|ZP_06979397.1| metal-dependent hydrolase [Streptococcus pneumoniae str. Canada
           MDR_19A]
 gi|298502544|ref|YP_003724484.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae TCH8431/19A]
 gi|298238139|gb|ADI69270.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pneumoniae TCH8431/19A]
          Length = 271

 Score = 45.5 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 30/264 (11%), Positives = 69/264 (26%), Gaps = 14/264 (5%)

Query: 4   VTVATWNVNSI--RARIHNL---AAWIKENNPDIICLQETK-------TEDKNFPFETLQ 51
           +   T N +S   +            I E + D+IC QE          E  +       
Sbjct: 1   MKFLTLNTHSWMEKEAEEKFQILLEDILEKDYDLICFQEINQEITSPEVEVNDLYQALPA 60

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
           +   H +   +     +    K        +  G D   +   I +   I  + + + ++
Sbjct: 61  AELIHQDHYVRLLVEKLLEQGKNYYWTWAYNHIGYDRYHEGVAILSKTPIEAREILVSDV 120

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
             P           + +   K     +      ++                    ++  +
Sbjct: 121 DDPTDYHTRRVALAETVVDGKELAVASVHLSWWDKGFQEEWARFEAVLKKLNKPLLLAGD 180

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
                 +          +G  DA     +    Y+            + +RID++  + E
Sbjct: 181 FNNPAGQEGYQAILASPLGLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTTKE 240

Query: 232 ATSLLHSARIDTKPRGWTKPSDHT 255
               + +  +        + SDH 
Sbjct: 241 LA--VENLHVVFDGNKSPQVSDHY 262


>gi|328946887|gb|EGG41024.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis
           SK1087]
          Length = 749

 Score = 45.5 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 28/72 (38%), Gaps = 10/72 (13%)

Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT---K 250
            +   HD    YS++ Y   + S      +D+I +S         A +           +
Sbjct: 600 NLMQEHDAADRYSYF-YRGSNQS------LDNIFISKNLAGKAVFAPVHINASFMEEHGR 652

Query: 251 PSDHTPVIVSLD 262
            SDH PV+V LD
Sbjct: 653 ASDHDPVVVQLD 664


>gi|327474564|gb|EGF19969.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis
           SK408]
          Length = 749

 Score = 45.5 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 28/72 (38%), Gaps = 10/72 (13%)

Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT---K 250
            +   HD    YS++ Y   + S      +D+I +S         A +           +
Sbjct: 600 NLMQEHDAADRYSYF-YRGSNQS------LDNIFISKNLAGKAVFAPVHINASFMEEHGR 652

Query: 251 PSDHTPVIVSLD 262
            SDH PV+V LD
Sbjct: 653 ASDHDPVVVQLD 664


>gi|327470461|gb|EGF15917.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis
           SK330]
          Length = 749

 Score = 45.5 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 28/72 (38%), Gaps = 10/72 (13%)

Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT---K 250
            +   HD    YS++ Y   + S      +D+I +S         A +           +
Sbjct: 600 NLMQEHDAADRYSYF-YRGSNQS------LDNIFISKNLAGKAVFAPVHINASFMEEHGR 652

Query: 251 PSDHTPVIVSLD 262
            SDH PV+V LD
Sbjct: 653 ASDHDPVVVQLD 664


>gi|327462051|gb|EGF08380.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis
           SK1057]
          Length = 720

 Score = 45.5 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 28/72 (38%), Gaps = 10/72 (13%)

Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT---K 250
            +   HD    YS++ Y   + S      +D+I +S         A +           +
Sbjct: 571 NLMQEHDAADRYSYF-YRGSNQS------LDNIFISKNLAGKAVFAPVHINASFMEEHGR 623

Query: 251 PSDHTPVIVSLD 262
            SDH PV+V LD
Sbjct: 624 ASDHDPVVVQLD 635


>gi|325695083|gb|EGD36986.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis
           SK150]
          Length = 749

 Score = 45.5 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 28/72 (38%), Gaps = 10/72 (13%)

Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT---K 250
            +   HD    YS++ Y   + S      +D+I +S         A +           +
Sbjct: 600 NLMQEHDAADRYSYF-YRGSNQS------LDNIFISKNLAGKAVFAPVHINASFMEEHGR 652

Query: 251 PSDHTPVIVSLD 262
            SDH PV+V LD
Sbjct: 653 ASDHDPVVVQLD 664


>gi|325687087|gb|EGD29110.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis SK72]
          Length = 749

 Score = 45.5 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 28/72 (38%), Gaps = 10/72 (13%)

Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT---K 250
            +   HD    YS++ Y   + S      +D+I +S         A +           +
Sbjct: 600 NLMQEHDVADRYSYF-YRGSNQS------LDNIFISKNLAGKAVFAPVHINASFMEEHGR 652

Query: 251 PSDHTPVIVSLD 262
            SDH PV+V LD
Sbjct: 653 ASDHDPVVVQLD 664


>gi|324991333|gb|EGC23266.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis
           SK353]
          Length = 749

 Score = 45.5 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 28/72 (38%), Gaps = 10/72 (13%)

Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT---K 250
            +   HD    YS++ Y   + S      +D+I +S         A +           +
Sbjct: 600 NLMQEHDAADRYSYF-YRGSNQS------LDNIFISKNLAGKAVFAPVHINASFMEEHGR 652

Query: 251 PSDHTPVIVSLD 262
            SDH PV+V LD
Sbjct: 653 ASDHDPVVVQLD 664


>gi|212691650|ref|ZP_03299778.1| hypothetical protein BACDOR_01145 [Bacteroides dorei DSM 17855]
 gi|237711947|ref|ZP_04542428.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|237725796|ref|ZP_04556277.1| conserved hypothetical protein [Bacteroides sp. D4]
 gi|212665839|gb|EEB26411.1| hypothetical protein BACDOR_01145 [Bacteroides dorei DSM 17855]
 gi|229435604|gb|EEO45681.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
 gi|229454642|gb|EEO60363.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
          Length = 281

 Score = 45.5 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 39/268 (14%), Positives = 81/268 (30%), Gaps = 27/268 (10%)

Query: 7   ATWNV------NSIRA---RIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYH 56
           AT+NV      +S+     R   +  +IK+   DI+ +QE    + ++      +     
Sbjct: 28  ATFNVRYDNPQDSLNNWQYRKDRVCQFIKDRELDIVGMQEVLHNQFQDLRAGLPEYDGIG 87

Query: 57  IETCGQKSYNGVA-ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
           +     K+    A +  +    E++        +         +      +     +   
Sbjct: 88  VGRDDGKTAGEYAPLFYRKDKYEVLDSNTFWLAENPDSVGMMGWDAVCVRIATWAKFKDK 147

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
                    +     +    R  S  L + +     G+                  DA  
Sbjct: 148 ATGKIFMAVNTHFDHVGEEARRQSALLIIRKIKEIVGER------PAVVTGDFNVTDASD 201

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDY-YADSWSKNKGIRIDHIMLSPEATS 234
             E   + + +    +  A R    T   Y+F D+    +    K   ID I ++P+   
Sbjct: 202 AYETITTNEFVMKDAYKTAARV---TGVDYTFHDFARIPAEDCEK---IDFIFVTPQVL- 254

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
            + +  I  +       SDH P +  L+
Sbjct: 255 -VKNCEIPAEV-PEALLSDHNPQLADLE 280


>gi|169343045|ref|ZP_02864073.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens C str. JGS1495]
 gi|169298955|gb|EDS81029.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens C str. JGS1495]
          Length = 263

 Score = 45.5 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 37/269 (13%), Positives = 76/269 (28%), Gaps = 20/269 (7%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQE----TKTEDKNFPFETLQSLN 54
           + + T N +S        +I  LA  I E   D+I LQE     K          L+  N
Sbjct: 1   MKLLTLNCHSWLEEEQLYKIKYLAKTIVEEKYDVIALQEASQSIKAS---IKEGNLKEDN 57

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           Y +    +          +Y  +   +H+  D  +     +     +N+++  I   +  
Sbjct: 58  YGLVLIEEIKK---LGGEEYHLVWDYSHIGYDIYEEGLCILTKHKIVNSESFYISKSHSK 114

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
               +            +    ++       +              H   +         
Sbjct: 115 TFWRLRKIVKATIDINNENIDFYSCHMGWWHDKEEIFTFQVENLLAHAKESKNRAFFMGD 174

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD--SWSKNKG-IRIDHIMLSPE 231
           F        +    +     I       +  S      +   W  N G +RID I  +  
Sbjct: 175 FNNNAFLKNEGYDFLKSNGLIDTYDLAENKDSGVTVNKNIAGWEDNTGELRIDIIFTNRN 234

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
             + ++ +R+    +     SDH  + + 
Sbjct: 235 --TKVYDSRVIFNGKNKEVVSDHFGLEIE 261


>gi|149642963|ref|NP_001092580.1| protein angel homolog 2 [Bos taurus]
 gi|158706418|sp|A6H7I3|ANGE2_BOVIN RecName: Full=Protein angel homolog 2
 gi|148877303|gb|AAI46258.1| ANGEL2 protein [Bos taurus]
 gi|296478861|gb|DAA20976.1| protein angel homolog 2 [Bos taurus]
          Length = 544

 Score = 45.5 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 5/63 (7%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73
           R  N+   IK  + D++CLQE   ++ ++  E    L+SL YH E   +           
Sbjct: 200 RFPNILKEIKHFDADVLCLQEV--QEDHYGTEIRPSLESLGYHCEYKMRTGRKPDGCAIC 257

Query: 74  YQP 76
           ++ 
Sbjct: 258 FKH 260


>gi|23013323|ref|ZP_00053232.1| COG3568: Metal-dependent hydrolase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 330

 Score = 45.5 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 18/52 (34%), Gaps = 10/52 (19%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSD----------HTPVIVSLDIP 264
           +DHI++S         A I  +  G    S           H PV+    +P
Sbjct: 277 LDHILVSRPLLGWYLGAEIHNETLGDELVSPALVLAPPQSYHAPVVAEFSLP 328



 Score = 41.7 bits (96), Expect = 0.13,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 21/50 (42%), Gaps = 14/50 (28%)

Query: 1  MSVVTVATWN--------VNSI----RARIHNLAAWIKENNPDIICLQET 38
          M+ + +AT+N        V  I    R  +  +    +    DI+CLQE 
Sbjct: 1  MTPLRIATFNLENLDERPVGGIDFEDRLAV--MRPQFQRLRADILCLQEV 48


>gi|269929041|ref|YP_003321362.1| Endonuclease/exonuclease/phosphatase [Sphaerobacter thermophilus
           DSM 20745]
 gi|269788398|gb|ACZ40540.1| Endonuclease/exonuclease/phosphatase [Sphaerobacter thermophilus
           DSM 20745]
          Length = 635

 Score = 45.5 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 21/50 (42%), Gaps = 7/50 (14%)

Query: 214 SWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +W+     RID+I+ +      L    I        + SDH PV+  L I
Sbjct: 591 AWTSEDHRRIDYILATTGIE--LRDIEILDS-----RASDHRPVVARLTI 633



 Score = 39.0 bits (89), Expect = 0.83,   Method: Composition-based stats.
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 5/40 (12%)

Query: 4   VTVATWNV-NSIRA----RIHNLAAWIKENNPDIICLQET 38
           +TV T+N+ N         +  LA  I+E +PD++ LQE 
Sbjct: 409 ITVITYNIQNGFSIDNYFALDALARTIEEVHPDVVVLQEV 448


>gi|237717266|ref|ZP_04547747.1| metallophosphoesterase [Bacteroides sp. D1]
 gi|229443249|gb|EEO49040.1| metallophosphoesterase [Bacteroides sp. D1]
          Length = 608

 Score = 45.5 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 36/279 (12%), Positives = 72/279 (25%), Gaps = 60/279 (21%)

Query: 3   VVTVATWNV---NSIRARIH------NLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
            + + T+N+   N     +        +A  I   +PD++ +QE                
Sbjct: 22  TLRLMTYNIKNANG----MDDICSFQRVANVINNASPDVVAIQEV--------------- 62

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ-TLRIGNLY 112
                       +G   +          H                  +  Q  LR+  + 
Sbjct: 63  ------DSMTRRSGQKYVLGEIAECTQMHACFAPAIEFEGGKYGIGLLAKQVPLRLQTIP 116

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
           LP      +    +   +I      +    +  + L          +        +    
Sbjct: 117 LPGREEARTLILAEFEDYIYCCTHLSLTEEDRMKSLEIVKSLIASCKKPLFLAGDMNAEP 176

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
               ++  Q   ++ +        A                         ID+I  S + 
Sbjct: 177 ESDFIKELQKDFQILSNPEKHTYPAPDPKET-------------------IDYIAASKQN 217

Query: 233 TS--LLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKK 269
            +   + SAR+  +P      SDH P++V L   E   K
Sbjct: 218 ATGFAVISARVVNEPM----ASDHRPILVELRTAEKADK 252


>gi|68433741|ref|XP_700794.1| PREDICTED: nocturnin [Danio rerio]
          Length = 432

 Score = 45.5 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 40/306 (13%), Positives = 79/306 (25%), Gaps = 44/306 (14%)

Query: 2   SVVTVATWNV---------NS-IR---------ARIHNLAAWIKENNPDIICLQETKTED 42
           S + +  WN+         +  +R          R + +   I    PD++CLQE    D
Sbjct: 131 SPLRIMQWNILAQALGEGKDGFVRCPMEALNWSERKYLILEEILTYRPDVVCLQEV---D 187

Query: 43  KNFPFE--TLQSLNYHIETCGQKS------YNGVAILSKYQPIEIVTHLPGDDLDVQARF 94
             F      L SL Y    C +        +N                       ++   
Sbjct: 188 HYFDTFQPVLSSLGYQSSFCPKPCSPCLDVHNNNGPDGCALFFNRRRFQMLHTAHLRLSA 247

Query: 95  IEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDY 154
           +            +          +  T    +  W        +  L+    +    + 
Sbjct: 248 MMLKTNQVAVVATLRCKLTGRVFCVAVTHLKARSGWEAFRSAQGANLLQQLHEITSQSNP 307

Query: 155 NIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN----MGFTDAIRATHDTHHLYSFWDY 210
            +         P+I   D               +          +     T   Y+ W  
Sbjct: 308 EMHQDDQTEGIPLIVCGDFNAEPNEEVYRHFRSSSLGLDSVYKCLSDDRTTEPPYTSWKI 367

Query: 211 YADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR-------GWTKPSDHTPVIVSLDI 263
                  +    +D+I  S +A  +    RI ++ +        +  PSDH  ++  L  
Sbjct: 368 RPSGECCST---LDYIWYSEKAFEVDAVLRIPSEEQIGPDRLPSFHYPSDHLSLVCDLSF 424

Query: 264 PEPRKK 269
            +   +
Sbjct: 425 SQQPHR 430


>gi|301763641|ref|XP_002917232.1| PREDICTED: LOW QUALITY PROTEIN: protein angel homolog 2-like
           [Ailuropoda melanoleuca]
          Length = 546

 Score = 45.5 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 5/63 (7%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73
           R  N+   IK  + D++CLQE   ++ ++  E    L+SL YH E   +           
Sbjct: 202 RFPNILKEIKHFDADVLCLQEV--QEDHYGAEIRPSLESLGYHCEYKMRTGRKPDGCAIC 259

Query: 74  YQP 76
           ++ 
Sbjct: 260 FKH 262


>gi|297849552|ref|XP_002892657.1| endonuclease/exonuclease/phosphatase family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297338499|gb|EFH68916.1| endonuclease/exonuclease/phosphatase family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 444

 Score = 45.5 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 37/291 (12%), Positives = 79/291 (27%), Gaps = 54/291 (18%)

Query: 4   VTVATWNVNS-----IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           + + ++NV       +  R+  +   I+ ++P +IC QE     +   ++  +  N+   
Sbjct: 176 LKILSYNVWFREDLELNLRMRAIGHLIQLHSPHLICFQEV--TPEI--YDIFRKSNWWKA 231

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
                S +       Y  +     +                +I  + L I  + +P G P
Sbjct: 232 YSCSVSVDVAVSRGYYCMLLSKLGVKSFSSKSFGN------SIMGRELSIAEVEVPGGKP 285

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
           +           +       S      +         +              N       
Sbjct: 286 L-----------VFATSHLESPCPGPPKWDQMFSRERVEQAKEAIEILRPNTNVIFGGDM 334

Query: 179 VRQSF---QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI--RIDHIMLSPEAT 233
                   +      + D           +++        S N+ +  R+D I+      
Sbjct: 335 NWDDKLDGKFPLADKWVDVWEVMKPGDLGFTYDTKANPMLSGNRALQKRLDRILC--RLD 392

Query: 234 S-LLHSARI-------------DTKPRGWTK-------PSDHTPVIVSLDI 263
              L    I             + K RG  K       PSDH  ++++L +
Sbjct: 393 DYKLGGIEIVGKEAIPGLSYEKEKKVRGEIKKLELPVLPSDHFGLLLTLSL 443


>gi|225166446|ref|ZP_03728100.1| endonuclease/exonuclease/phosphatase [Opitutaceae bacterium TAV2]
 gi|224799314|gb|EEG17887.1| endonuclease/exonuclease/phosphatase [Opitutaceae bacterium TAV2]
          Length = 313

 Score = 45.5 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 4/58 (6%)

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           ++  YY  +  +    R+D+I++SP   + +    +   P G    SDH PV V L  
Sbjct: 259 TWTHYY--AREETY-SRVDNILVSPALAAAVVRMWVVDSP-GVLVASDHRPVAVELRW 312


>gi|134098128|ref|YP_001103789.1| hypothetical protein SACE_1542 [Saccharopolyspora erythraea NRRL
           2338]
 gi|133910751|emb|CAM00864.1| hypothetical protein SACE_1542 [Saccharopolyspora erythraea NRRL
           2338]
          Length = 305

 Score = 45.5 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 43/277 (15%), Positives = 76/277 (27%), Gaps = 41/277 (14%)

Query: 6   VATWNVNSIR--------------ARIHNLAAWIKENNPDIICLQE-----TKTEDKNFP 46
           V ++N   IR               R   LA  +   +P ++ +QE      K    + P
Sbjct: 48  VMSFN---IRYDSKAVPPSPDAWSTRRPILAELLNAESPTLLGVQEALYRQVKQVHADIP 104

Query: 47  FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
                  +Y     G++       +S Y     V  L  D   +              T+
Sbjct: 105 ------AHYDWIGLGREGGGRGEFMSIYYDTRRVEPLDYDHFWLSDTPNVIGSASWGNTV 158

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
                ++   +  T  ++    +        + QR         AG    +P        
Sbjct: 159 VRMVTWVRFRDLRTGREFTHVNTHFDHQSENSRQRSAALVRDRIAGFDAGLPVLLTGDFN 218

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226
               +   + +                   A        +F  Y         G RID +
Sbjct: 219 TRAGDSESYRILTSGGLADGWETAAERLTPAWG------TFGGYEE---PVEGGDRIDWL 269

Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPV--IVSL 261
           + +      +  A I+   +    PSDH PV  +V L
Sbjct: 270 LANDRV--RVLKAAINPFRKDGWFPSDHLPVHALVEL 304


>gi|296230134|ref|XP_002760575.1| PREDICTED: protein angel homolog 2 isoform 1 [Callithrix jacchus]
          Length = 544

 Score = 45.5 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 5/63 (7%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73
           R  N+   IK  + D++CLQE   ++ ++  E    L+SL YH E   +           
Sbjct: 200 RFPNILKEIKHFDADVLCLQEV--QEDHYGAEIRPSLESLGYHCEYKMRTGRKPDGCAIC 257

Query: 74  YQP 76
           ++ 
Sbjct: 258 FKH 260


>gi|224102549|ref|XP_002312721.1| predicted protein [Populus trichocarpa]
 gi|222852541|gb|EEE90088.1| predicted protein [Populus trichocarpa]
          Length = 493

 Score = 45.5 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 34/251 (13%), Positives = 67/251 (26%), Gaps = 25/251 (9%)

Query: 21  LAAWIKENNPDIICLQETKTEDKN---FPFETLQSLNY-HIETCGQKSYNGVAILSKYQP 76
           +   +KE + DI+ LQ+ K +++       +   SL   ++         G AILSK+  
Sbjct: 219 IMEVLKEVDSDILALQDVKADEEKGMSPLSDLAASLGMKYVFAESWAPGYGNAILSKWPI 278

Query: 77  IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
                    +D D +       +      +      L H +     K    +        
Sbjct: 279 KRWKVQKIANDEDFRNVLKATIYVPWAGEVDFYCTQLDHLDENWRMKQIGAMIKSNDMTP 338

Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIR 196
                          G      +  D              +EV +  +    +   +   
Sbjct: 339 HIL----AGGINSLDGSDYSSERWMDIVKYYEDIGKPTPRIEVTKFLKGKGYVDAKEYAG 394

Query: 197 ATHDTHHLYSFWDYYADSWSKN------KGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
                  +         +  +N       G R+D+++ SP +                  
Sbjct: 395 ECEPVVIV---------AKGQNVQGTCKYGTRVDYMLASPYSPYKFVPGS--YSVISSKG 443

Query: 251 PSDHTPVIVSL 261
            SDH  V   +
Sbjct: 444 TSDHHIVKADI 454


>gi|50287091|ref|XP_445975.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49525281|emb|CAG58894.1| unnamed protein product [Candida glabrata]
          Length = 436

 Score = 45.5 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 35/311 (11%), Positives = 78/311 (25%), Gaps = 55/311 (17%)

Query: 4   VTVATWNVNSI-------RARIHNLAAWIKEN---------------------NPDIICL 35
           +   T+N   +       RAR+  LA  +  +                     + DI+ L
Sbjct: 9   IKFLTFNTWGLKYVSKHRRARLRALAEKLAGHQNSNIKSLPNSEDLYADNDFEDYDIVAL 68

Query: 36  QETKTEDK-----NFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIE------------ 78
           QE   ++          +      +            +      +               
Sbjct: 69  QEIWCKEDWDYIVEQCGKIFPYYRWFYSGILSGPGLAILSKIPIESTFLYRYPINGRPSA 128

Query: 79  IVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYD-DKISWIKRFLRF 137
           I          +    +       T  + + +      +      Y   +      F + 
Sbjct: 129 IHRGDWYVGKSIAITTLRNRENPTTPIVIMNSHMHAPYSLTGDAAYSCHRSCQAWDFAKL 188

Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ----KLQNMGFTD 193
           A    E    ++  GD N  P                   ++         +  N     
Sbjct: 189 AKIYREAGYAVVIVGDLNSRPGSLPHNILTKEAGLIDSWEQLHGKQDLEKIRTMNAMDQL 248

Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK-PRGWTKPS 252
               T     L ++    A+    ++  R+D+ ++ P   + + +    T+   G    S
Sbjct: 249 VYACTTCDSTLNTW---RANRRP-DEACRLDYALVDPRRLTTIKTGIKFTELIDGVGSFS 304

Query: 253 DHTPVIVSLDI 263
           DH     +L++
Sbjct: 305 DHFAYSCTLEV 315


>gi|13476402|ref|NP_107972.1| hypothetical protein mll7713 [Mesorhizobium loti MAFF303099]
 gi|14027163|dbj|BAB54117.1| mll7713 [Mesorhizobium loti MAFF303099]
          Length = 358

 Score = 45.5 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 43/263 (16%), Positives = 72/263 (27%), Gaps = 50/263 (19%)

Query: 19  HNLAAWIKENNPDIICLQET---KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75
             + + I   NPD+I L E     T +  F      +  Y I         GVA+LS+  
Sbjct: 132 KKVLSLIGRTNPDVITLDEVSQMWTTELGF---IASAYPYRILCPYPNGMFGVALLSRRP 188

Query: 76  PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135
            +       G     + R   AT TI+   + +    +          +        +  
Sbjct: 189 FVA------GTAPRCEPRGAMATATIDFGGIEVDVAAIHLS-------WPWPKEQYWQIG 235

Query: 136 RFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAI 195
             A     L +  I AGD N +P                          +          
Sbjct: 236 ELAQTLAGLGQTAIMAGDCNAVPWSAAVRRVAALGGLTLMPSAGPTWIHRTLPDVL---- 291

Query: 196 RATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHT 255
                                +  G+ ID +      T       I +  R     SDH 
Sbjct: 292 --------------------RRYAGLPIDQVFSKGGLT-------ILSSQRLEDTGSDHL 324

Query: 256 PVIVSLDIPEPRKKQQDSTSQNM 278
           PV+V   +    K+ ++  +  +
Sbjct: 325 PVLVEFTLRSDDKQPENGHATAL 347


>gi|172058914|ref|YP_001815374.1| endonuclease/exonuclease/phosphatase [Exiguobacterium sibiricum
           255-15]
 gi|171991435|gb|ACB62357.1| Endonuclease/exonuclease/phosphatase [Exiguobacterium sibiricum
           255-15]
          Length = 267

 Score = 45.5 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 38/269 (14%), Positives = 81/269 (30%), Gaps = 16/269 (5%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYHI 57
           + + T N +S +      ++  +   I + + D+I LQE  +  D    +  ++  N+  
Sbjct: 1   MRLLTLNCHSWQETDQLEKLDQIVTQIIQQDYDVIALQEVSQLMDTPVLYNNIREDNFVY 60

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
                 +  G      +    I     G D   +   +     I        +      +
Sbjct: 61  LIQQALAKQGFDYSFVWDFSHI-----GYDAYEEGLALLTKHPILKSDSYYISRSQDTMD 115

Query: 118 PITSTKYDDKISWIKRFLRFASQR--LELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
             +       I      + F S       +    F+  +N +    D     ++  D   
Sbjct: 116 WKSRKIVRATIDLDGTPITFNSCHLGWWEDADEPFSEQFNNLIARMDPLEWTMFMGDFNN 175

Query: 176 T-LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             LE    +  +   G  D      +T  + +            KG+R+D ++ + +   
Sbjct: 176 DALERETGYDYMMQRGLHDVFLLAQETVGIETVEGKIDGWEENQKGLRLDLVLSNRKID- 234

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            +    +          SDH  V V + I
Sbjct: 235 -VDRVGVVFDGVFAPVVSDHFGVEVDISI 262


>gi|282862201|ref|ZP_06271264.1| Endonuclease/exonuclease/phosphatase [Streptomyces sp. ACTE]
 gi|282563226|gb|EFB68765.1| Endonuclease/exonuclease/phosphatase [Streptomyces sp. ACTE]
          Length = 253

 Score = 45.5 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 15/36 (41%), Positives = 23/36 (63%)

Query: 2  SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQE 37
          ++V V ++NV S+R     LA  I+   PD++CLQE
Sbjct: 19 ALVRVLSYNVRSLRDDTEALARVIRACAPDLVCLQE 54


>gi|262406033|ref|ZP_06082583.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|294646465|ref|ZP_06724105.1| Ser/Thr phosphatase family protein [Bacteroides ovatus SD CC 2a]
 gi|294806878|ref|ZP_06765703.1| Ser/Thr phosphatase family protein [Bacteroides xylanisolvens SD CC
           1b]
 gi|262356908|gb|EEZ05998.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|292638200|gb|EFF56578.1| Ser/Thr phosphatase family protein [Bacteroides ovatus SD CC 2a]
 gi|294445907|gb|EFG14549.1| Ser/Thr phosphatase family protein [Bacteroides xylanisolvens SD CC
           1b]
          Length = 611

 Score = 45.5 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 36/279 (12%), Positives = 72/279 (25%), Gaps = 60/279 (21%)

Query: 3   VVTVATWNV---NSIRARIH------NLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
            + + T+N+   N     +        +A  I   +PD++ +QE                
Sbjct: 25  TLRLMTYNIKNANG----MDDICSFQRVANVINNASPDVVAIQEV--------------- 65

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ-TLRIGNLY 112
                       +G   +          H                  +  Q  LR+  + 
Sbjct: 66  ------DSMTRRSGQKYVLGEIAECTQMHACFAPAIEFEGGKYGIGLLAKQVPLRLQTIP 119

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
           LP      +    +   +I      +    +  + L          +        +    
Sbjct: 120 LPGREEARTLILAEFEDYIYCCTHLSLTEEDRMKSLEIVKSLIASCKKPLFLAGDMNAEP 179

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
               ++  Q   ++ +        A                         ID+I  S + 
Sbjct: 180 ESDFIKELQKDFQILSNPEKHTYPAPDPKET-------------------IDYIAASKQN 220

Query: 233 TS--LLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKK 269
            +   + SAR+  +P      SDH P++V L   E   K
Sbjct: 221 ATGFAVISARVVNEPM----ASDHRPILVELRTAEKADK 255


>gi|21952510|gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score = 45.5 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 76/254 (29%), Gaps = 33/254 (12%)

Query: 8   TWNVNSIR--ARIHNLAAWIKENNP---DIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           +WNV       R  N   W K +      I+   ET+ ++       L S       C  
Sbjct: 6   SWNVRGFNNSVRRRNFRKWFKLSKALFGSIL---ETRVKEHRARRSLLSSFPGWKSVCNY 62

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           +      I   + P   VT L   D  +         +       +  +   +G     +
Sbjct: 63  EFAALGRIWVVWDPAVEVTVLSKSDQTISCTVKLPHISTEFVVTFVYAVNCRYGRRRLWS 122

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
           + +            A+ +   ++P I  GD+N    P D                    
Sbjct: 123 ELE----------LLAANQTTSDKPWIILGDFNQSLDPVDASTGGSRITRGMEEFRECLL 172

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
              + ++ F             Y++W+   ++    K   ID I+++      L ++ + 
Sbjct: 173 TSNISDLPFRGNH---------YTWWNNQENNPIAKK---IDRILVNDS---WLIASPLS 217

Query: 243 TKPRGWTKPSDHTP 256
                  + SDH P
Sbjct: 218 YGSFCAMEFSDHCP 231


>gi|47205662|emb|CAF99515.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 481

 Score = 45.5 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 5/46 (10%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS---LNYHIET 59
           R+ NL A I++++ DI+CLQE   ++ ++  +   +   L Y  E 
Sbjct: 190 RLPNLLAEIRQHDADILCLQEV--QEDHYENQIKPALLTLGYQCEY 233


>gi|270015330|gb|EFA11778.1| hypothetical protein TcasGA2_TC005283 [Tribolium castaneum]
          Length = 955

 Score = 45.5 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 10/28 (35%), Positives = 13/28 (46%)

Query: 9   WNVNSIRARIHNLAAWIKENNPDIICLQ 36
           WN N +RA    L  +I     DI+  Q
Sbjct: 495 WNANGLRAARDELEEFINRLQLDIVLFQ 522


>gi|117928188|ref|YP_872739.1| endonuclease/exonuclease/phosphatase [Acidothermus cellulolyticus
           11B]
 gi|117648651|gb|ABK52753.1| Endonuclease/exonuclease/phosphatase [Acidothermus cellulolyticus
           11B]
          Length = 249

 Score = 45.5 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 35/255 (13%), Positives = 70/255 (27%), Gaps = 36/255 (14%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKS 64
            V ++NV S+R     +   I+   PDI  +QE                         + 
Sbjct: 15  RVLSYNVRSLRDDRSAVVEVIRTVRPDIAFVQE-----------------------APRF 51

Query: 65  YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124
           +      ++      +  + G         + A          +   + P  +       
Sbjct: 52  FRWRTRCAQLAADAGMYVVTGGRSAGDVLLLAALRVTIRWARDVRLSHQPGLHRRGVALA 111

Query: 125 DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ 184
             +++  +  +      LE  + L    +   +P+  +  +P+I   D           +
Sbjct: 112 GVELAGRRAVVASIHLGLEPAQRLRHVAELLAVPEIAEGVDPVIIAGDVNEEPSGPAWRR 171

Query: 185 KLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK 244
            L          A       YS       +       RID I + P     +    +   
Sbjct: 172 -LAERYRDAYGVAPAGRGETYS-------ARQPRT--RIDGIFVDPRF--QVIRCEV-PD 218

Query: 245 PRGWTKPSDHTPVIV 259
                + SDH PV+ 
Sbjct: 219 LPAVRRASDHLPVLA 233


>gi|257075603|ref|ZP_05569964.1| hypothetical protein Faci_00999 [Ferroplasma acidarmanus fer1]
          Length = 24

 Score = 45.5 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 8/17 (47%), Positives = 12/17 (70%)

Query: 4  VTVATWNVNSIRARIHN 20
          + + +WNVN IRA + N
Sbjct: 1  MKILSWNVNGIRAAVKN 17


>gi|229051261|ref|ZP_04194787.1| hypothetical protein bcere0027_52020 [Bacillus cereus AH676]
 gi|228722111|gb|EEL73530.1| hypothetical protein bcere0027_52020 [Bacillus cereus AH676]
          Length = 237

 Score = 45.5 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 36/263 (13%), Positives = 67/263 (25%), Gaps = 31/263 (11%)

Query: 4   VTVATWNVNS--IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + +  WN  S   R +I  +         DI+ + E          E  +      +  G
Sbjct: 1   MKIVAWN-ASMAFRKKIDKILPL----KADILAISEC---------EKSEKWGQIDKEKG 46

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
              +             I                   + +  +       ++        
Sbjct: 47  INDFLWEGDNPNKGIGIIAFDERYQIEIHPDYNRSFRYIVPIKVSSDKQEFIMFAVWSQK 106

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL--EV 179
            K        + +L        L+EP I  GD+N            I      F    E+
Sbjct: 107 GKKRYSRYIGQIYLVLEKYASLLKEPCIIIGDWNSSKLYDWIKRVKIHSEVVEFLEGFEI 166

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           + ++             A H              +   +    ID++  S        S 
Sbjct: 167 KSAYHPFYEEEHGKDSEAPHYFRKE--------KARPFH----IDYLFASEIFLEQFKSF 214

Query: 240 RIDTKPRGWTKPSDHTPVIVSLD 262
           +I +    W + SDH P+I   +
Sbjct: 215 KIGSCE-EWIEFSDHMPIIAEFN 236


>gi|77411870|ref|ZP_00788203.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           agalactiae CJB111]
 gi|77162091|gb|EAO73069.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           agalactiae CJB111]
          Length = 271

 Score = 45.5 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 41/283 (14%), Positives = 80/283 (28%), Gaps = 38/283 (13%)

Query: 5   TVATWN------VNSIRARIHNLAAW---IKENNPDIICLQETKTEDKNFPFETLQSLNY 55
              T N      VN     +  L      I     DIICLQE              S NY
Sbjct: 3   KCLTLNTHSWMEVN----ALKKLFDLAEHIFREKYDIICLQEV--NQSISSPLAKSSPNY 56

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
           H        +     L     +    +L G        +    ++   + + I +L    
Sbjct: 57  HPIEGTPALHQDNFAL----QLVHYLNLQGLHYHWTWAYNHIGYSKYHEGVAILSLKPLK 112

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
            + I  +  DD+  +  R    A   L  +   + +   ++                   
Sbjct: 113 PDDILVSAVDDETDYHTRRALVAETTLNDKVVTVVS--LHLSWFEKGFAEEWKRLETTLL 170

Query: 176 TLEVRQSFQKLQNMGF---------------TDAIRATHDTHHLYSFWDYYADSWSKNKG 220
            +E         N                   D+ +  +     ++            K 
Sbjct: 171 EVETPLLLMGDFNNPTGNQGYELVLNSPLALKDSHQIANHVFGDHTIMADIDGWEGNKKA 230

Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +++DHI  S +    + S+++  +       SDH  + ++L++
Sbjct: 231 LKVDHIFTSEDL--SISSSQVVFEGGEAPVVSDHYGLEITLNL 271


>gi|74008436|ref|XP_852503.1| PREDICTED: similar to LINE-1 reverse transcriptase homolog [Canis
           familiaris]
          Length = 1208

 Score = 45.5 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 38/110 (34%), Gaps = 12/110 (10%)

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
               + E R     L  M FTD  R        Y+F+     ++S     RIDHI+    
Sbjct: 91  KHNISKETRALNDTLDQMDFTDIYRTLQPNSTEYTFFSSAHGTFS-----RIDHILGHKS 145

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
             +      I          SDH  + + L+    +K  + S    ++ I
Sbjct: 146 GLNRYQKIGIVPCI-----FSDHNALKLELN--HNKKFGRTSNMWRLRTI 188


>gi|77461257|ref|YP_350764.1| aminoacyl-tRNA hydrolase [Pseudomonas fluorescens Pf0-1]
 gi|77385260|gb|ABA76773.1| Endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           fluorescens Pf0-1]
          Length = 265

 Score = 45.5 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 32/252 (12%), Positives = 69/252 (27%), Gaps = 29/252 (11%)

Query: 15  RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKY 74
           R  +  L   ++  + D++ LQE     ++ P                         S +
Sbjct: 40  RFILPELREAVRSVSADVVFLQEVHGTHEHHPK--------RYNNWPTMPQYEFLADSLW 91

Query: 75  QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRF 134
                  +    + D     +     +    L + ++       +            +  
Sbjct: 92  PQFAYGRNAVYPEGDHGNAVLSKFQIVRHDNLDV-SISGHENRGLLHCVLRLPGDDREVH 150

Query: 135 LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDA 194
                  L                       P+I   D  F    +++   L+  G  + 
Sbjct: 151 AICVHLGLRESHRNAQLALLKKRLAELPEDAPVIVAGD--FNDWRQRADALLEPCGLREV 208

Query: 195 IRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLS--PEATSLLHSARIDTKPRGWTKP 251
             A H            A S+  +   +R+D I +S    +   + +       R W+  
Sbjct: 209 FAAHHGRS---------ARSFPARLPLLRLDRIYVSNLKASQPKVLA------NRPWSHL 253

Query: 252 SDHTPVIVSLDI 263
           SDH P+ V +++
Sbjct: 254 SDHAPLSVEIEL 265


>gi|32472775|ref|NP_865769.1| signal peptide [Rhodopirellula baltica SH 1]
 gi|32444012|emb|CAD73454.1| hypothetical protein-signal peptide prediction [Rhodopirellula
           baltica SH 1]
          Length = 284

 Score = 45.5 bits (106), Expect = 0.008,   Method: Composition-based stats.
 Identities = 33/252 (13%), Positives = 72/252 (28%), Gaps = 39/252 (15%)

Query: 19  HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIE 78
             LA  +   +PDII   E  +  +    E  + L  +         N    L     I 
Sbjct: 64  KRLAMELALYDPDIINFSE--SPSEKLTKEVAELLGMN-HVRFPSGGNWPGTLLSKSKIS 120

Query: 79  IVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFA 138
              + P +    +  F         +      L +   +   + +   ++  I+  ++  
Sbjct: 121 DSQNAPMNGERPKELFTRHWGRALVELPNDEPLIVHSAHLYPTPEPTIRLREIRAMIKSM 180

Query: 139 SQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT 198
              L+    ++  GD N  P   +                         + G+ D     
Sbjct: 181 KSDLDSGRSMLLIGDLNHSPDTDEYKLWK--------------------DAGWIDTFAKV 220

Query: 199 HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA--------RIDTKPRGWTK 250
            + +  ++         + N   RID++  +      +  +        R++ +      
Sbjct: 221 GEGNG-FT-------IKADNPEWRIDYVFATGPIAKRVGESRPLFEGAFRVNNEDEKSYA 272

Query: 251 PSDHTPVIVSLD 262
            SDH P +   D
Sbjct: 273 LSDHLPQLAVFD 284


>gi|326799553|ref|YP_004317372.1| endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21]
 gi|326550317|gb|ADZ78702.1| Endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21]
          Length = 649

 Score = 45.5 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 46/270 (17%), Positives = 83/270 (30%), Gaps = 48/270 (17%)

Query: 5   TVATWNVN--------SIRARIHNLAAWIKENNPDIICLQETKTEDKNFP---FETLQSL 53
            V ++NV         SI  R  ++   I +N PD+  +QE    D +F       +  L
Sbjct: 86  KVLSFNVRHHDDSDPQSIDERKGSIRQIIVDNAPDVFGVQE--FSDDSFETWFRAQMADL 143

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
            Y         Y   +I    + I              +R   +        + + +   
Sbjct: 144 GY-------GEYYDTSITGTPKAIFYKNVRFSLQRSGTSRLGASPIINTATWVVLQDKIT 196

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
            +   I+++ +      I+                       ++ Q +    P+I   D 
Sbjct: 197 SNRYFISNSHWQYDSQAIR--------------IENAKALAALVKQENTDNLPVIVFGDF 242

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF--WDYYADSWSKNKGIRIDHIMLSPE 231
                + +       +   DA+    D+   Y+F  WD    S        +D IM    
Sbjct: 243 NAKPGITEILNLKNELDVVDAL---GDSSGDYTFHGWDATGSSK-------LDWIMSDRS 292

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
                 S+R+ T       PSDH P+I + 
Sbjct: 293 MA--FTSSRVITTSYNGYWPSDHWPIIATY 320


>gi|311696709|gb|ADP99582.1| extracellular nuclease [marine bacterium HP15]
          Length = 586

 Score = 45.5 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 28/86 (32%), Gaps = 24/86 (27%)

Query: 195 IRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR---IDTKP------ 245
              T  T   Y++  Y        KG  +D  + S      +  A    ++         
Sbjct: 508 YPCTEKTCGHYTY-RYRGQ-----KGS-LDFALASETLKPRVMGAWSWLVNADEPRVLDY 560

Query: 246 --------RGWTKPSDHTPVIVSLDI 263
                   RG  + SDH PVIV L +
Sbjct: 561 RSDHPASGRGPWRSSDHNPVIVDLKL 586


>gi|281338153|gb|EFB13737.1| hypothetical protein PANDA_004239 [Ailuropoda melanoleuca]
          Length = 368

 Score = 45.5 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 39/265 (14%), Positives = 70/265 (26%), Gaps = 30/265 (11%)

Query: 21  LAAWIKENNPDIICLQETKTEDKNFPFE--TLQSLNYHIETCGQKSYNGVAILSKYQPIE 78
           +   I   +PDI+CLQE    D  F      L  L Y      +         S    +E
Sbjct: 116 ILEEILAYHPDILCLQEV---DHYFDTFQPLLGRLGYQGTFFPKP-------WSPCLDVE 165

Query: 79  IVTHLPGD--DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
                 G           +  +  I    + +    +     +   +   +       L+
Sbjct: 166 HNNGPDGCALFFLQNRFKLVNSANIRLTAMTLKTNQVAIAQTLECKESSRQFCIAVTHLK 225

Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV----RQSFQKLQNMGFT 192
                             N+    H    P+I   D             +   L      
Sbjct: 226 ARPGWERFRSAQGCDLLQNLQNITHGAKVPLIVCGDFNAEPTEEVYKHFASSSLNLSSAY 285

Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA-RIDTKPR----- 246
             + A   +   Y+ W        ++    +D+I  S  A   + SA  + T+ +     
Sbjct: 286 KLLSADGQSEPPYTTWKIRTSGECRHT---LDYIWYSQHAL-RVRSALDLLTEEQIGPNR 341

Query: 247 --GWTKPSDHTPVIVSLDIPEPRKK 269
              +  PSDH  ++      E    
Sbjct: 342 LPSFNYPSDHLSLVCDFSFNEEEPD 366


>gi|262283216|ref|ZP_06060983.1| LPXTG cell wall surface protein [Streptococcus sp. 2_1_36FAA]
 gi|262261468|gb|EEY80167.1| LPXTG cell wall surface protein [Streptococcus sp. 2_1_36FAA]
          Length = 779

 Score = 45.5 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 29/82 (35%), Gaps = 10/82 (12%)

Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT---K 250
            +   HD    YS++ Y   + S      +D+I +S         A +           +
Sbjct: 598 NLMQEHDAADRYSYF-YRGSNQS------LDNIFISKNLAGKAIFAPVHINASFMEEHGR 650

Query: 251 PSDHTPVIVSLDIPEPRKKQQD 272
            SDH PV+V LD      +   
Sbjct: 651 ASDHDPVVVQLDFSNQTNQPDT 672


>gi|157151208|ref|YP_001450928.1| LPXTG cell wall surface protein [Streptococcus gordonii str.
           Challis substr. CH1]
 gi|157076002|gb|ABV10685.1| LPXTG cell wall surface protein, nuclease/phosphatase domain
           [Streptococcus gordonii str. Challis substr. CH1]
          Length = 779

 Score = 45.5 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 29/82 (35%), Gaps = 10/82 (12%)

Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT---K 250
            +   HD    YS++ Y   + S      +D+I +S         A +           +
Sbjct: 598 NLMQEHDAADRYSYF-YRGSNQS------LDNIFISKNLAGKAIFAPVHINASFMEEHGR 650

Query: 251 PSDHTPVIVSLDIPEPRKKQQD 272
            SDH PV+V LD      +   
Sbjct: 651 ASDHDPVVVQLDFSNQTNQPDT 672


>gi|154282963|ref|XP_001542277.1| predicted protein [Ajellomyces capsulatus NAm1]
 gi|150410457|gb|EDN05845.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 956

 Score = 45.5 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 28/75 (37%), Gaps = 8/75 (10%)

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           + W           G  ID   LSP     L    I  +     K SDH P+  +L++  
Sbjct: 100 TTWQDRGSP-----GTTIDLTFLSPLLHDKLRRCAIAEEA---CKGSDHKPMETTLELTP 151

Query: 266 PRKKQQDSTSQNMKP 280
             K+ +    ++ +P
Sbjct: 152 IPKEAERRNWKDAEP 166


>gi|68477573|ref|XP_717099.1| potential Endonuclease/Exonuclease/Phosphatase [Candida albicans
           SC5314]
 gi|68477734|ref|XP_717019.1| potential Endonuclease/Exonuclease/Phosphatase [Candida albicans
           SC5314]
 gi|46438715|gb|EAK98041.1| potential Endonuclease/Exonuclease/Phosphatase [Candida albicans
           SC5314]
 gi|46438798|gb|EAK98123.1| potential Endonuclease/Exonuclease/Phosphatase [Candida albicans
           SC5314]
          Length = 363

 Score = 45.5 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 36/268 (13%), Positives = 79/268 (29%), Gaps = 48/268 (17%)

Query: 32  IICLQETKTEDKNFP----FETLQSLNYHIETCGQKSYNGVA--ILSKYQPIEIVTHLPG 85
           IICLQE    ++          +Q  NY+         +G    IL K Q  +I+ +   
Sbjct: 112 IICLQEV-LHNQLIDILQGLNDIQEWNYYGVGRTDGEKSGEFAPILYKDQDFKIIENSTF 170

Query: 86  DDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELE 145
                     +       + + +          I    ++          R  S +L ++
Sbjct: 171 WLSPTPHVPSKGWDAALERIVTMVTFQSRLNPEIKFNIFNTHYDHRGVEARRKSSQLIVD 230

Query: 146 EPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY 205
           +   +          +  +    +  +         +    ++       ++ +     +
Sbjct: 231 KMKNY--------NDYPSFLCGDFNTEPNDEPYHILTKAGFKDGKILIDKKSAYGFETTF 282

Query: 206 SFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSAR------------------------ 240
           + +D        N+ I RID+I  SP  T  L ++                         
Sbjct: 283 TGFD------INNEPISRIDYIW-SPSFTRTLSNSENDTNQDSDDDNDNDKSYEVTLKQF 335

Query: 241 -IDTKPRGWTKPSDHTPVIVSLDIPEPR 267
            I +        SDH PV+ + ++ + +
Sbjct: 336 GILSNWFNGHHFSDHRPVVSTYELRKKK 363


>gi|268315822|ref|YP_003289541.1| Endonuclease/exonuclease/phosphatase [Rhodothermus marinus DSM
           4252]
 gi|262333356|gb|ACY47153.1| Endonuclease/exonuclease/phosphatase [Rhodothermus marinus DSM
           4252]
          Length = 338

 Score = 45.5 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 39/257 (15%), Positives = 79/257 (30%), Gaps = 29/257 (11%)

Query: 23  AWIKENNPDIICLQETKTEDKNFPF----ETLQSLNYHIETCGQKSYNGVAILSKYQPIE 78
             ++  N D++ LQE   E++        E L  LNY +             ++    + 
Sbjct: 90  QVLRMINADLVVLQEV--ENEEVLRRMVTEDLPDLNYEVHFVQGHDTFTGQDVAVLSRLP 147

Query: 79  IVTHLPGDDLDVQARFIEATFTINTQTLRIGNL-YLPHGNPITSTKYDDKISWIKRFLRF 137
           +      ++        +         +R+           +      D      R    
Sbjct: 148 VEKIGRTEERVPVEGTDDTYGVSKNIWVRLYLGDLPATIIGVHFLAQPDDSRRKPRREAQ 207

Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA 197
           A     L E  + AG    +    + Y+  + + +    +    +  K    G  D +  
Sbjct: 208 AEVIRRLVERELAAGRAVAVLGDFNDYDESVLDLNGHRPITRTLALVKAAGPGPDDDLYN 267

Query: 198 TH---DTHHLYSFWDYYADSWSKNKGIR--------IDHIMLSPEATSLLHSARID--TK 244
                  H  ++ +      +  ++  +        IDH++LSP   + L          
Sbjct: 268 VMAEVPQHDRFTVF------YDADEDWQVEWPELAAIDHVLLSPRLRARLREVHYVQAYD 321

Query: 245 PRGWTKPSDHTPVIVSL 261
           PR  T   DH P++V+L
Sbjct: 322 PRTVT---DHFPIVVTL 335


>gi|218671527|ref|ZP_03521197.1| putative metal-dependent hydrolase protein [Rhizobium etli GR56]
          Length = 170

 Score = 45.5 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 19/41 (46%), Gaps = 3/41 (7%)

Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           +R+DHI ++ +    +  A +    R     SDH P+   +
Sbjct: 130 MRLDHIFVTDDLV--VKKATVLQN-RLTRIASDHLPLFAEI 167


>gi|296274120|ref|YP_003656751.1| endonuclease/exonuclease/phosphatase [Arcobacter nitrofigilis DSM
           7299]
 gi|296098294|gb|ADG94244.1| Endonuclease/exonuclease/phosphatase [Arcobacter nitrofigilis DSM
           7299]
          Length = 325

 Score = 45.5 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 20/47 (42%), Gaps = 5/47 (10%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPR-----GWTKPSDHTPVIVSLDIP 264
           ID I +S +    + S ++  +       G    SDH  V+  +DI 
Sbjct: 279 IDFIFVSEQLKDKIVSYKVFDEHLQKNRNGTLLESDHAQVVCEIDID 325


>gi|225463874|ref|XP_002268957.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 997

 Score = 45.5 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 2/40 (5%)

Query: 4  VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTE 41
          + + +WNV      ++   + A I+    D+ CLQETK  
Sbjct: 3  LRILSWNVRGANDSSKRRIIKAMIRSQRVDLFCLQETKIH 42


>gi|119477271|ref|ZP_01617507.1| Endonuclease/exonuclease/phosphatase [marine gamma proteobacterium
           HTCC2143]
 gi|119449634|gb|EAW30872.1| Endonuclease/exonuclease/phosphatase [marine gamma proteobacterium
           HTCC2143]
          Length = 260

 Score = 45.5 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 30/269 (11%), Positives = 68/269 (25%), Gaps = 32/269 (11%)

Query: 4   VTVATWNV-------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNF-PFETLQSLNY 55
           + + ++N+       NS RA +  L   I+  N D++ LQE    +K      + +    
Sbjct: 15  LRLCSYNIHKGICAANS-RAILPQLRHSIRTVNADMMFLQEV-VGEKQLADLSSKKVSGA 72

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
            +E    +                +         + +++    +      +         
Sbjct: 73  AVEYPQFEFLADEVWPHYAYGRNALYQTGHHGNAILSKYPFDEWD--NTDVSHWRFSQRG 130

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
                       I           +R  ++   + A             +   W      
Sbjct: 131 ILLGKLEIGLYVICTHFGLFGRERKRQLVQLLDLVAERVPDAAPLIIAGDFNDWSGSLDR 190

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            +  R   Q +    +    +       ++S        + +N                 
Sbjct: 191 QIRHRIGVQDVYREAYGRRAKTFPAKFPVFS----MDRIYYRNM---------------E 231

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
           L  A + +    W + SDH  +     IP
Sbjct: 232 LIDAEVLSG-MPWQQLSDHCALYAEFSIP 259


>gi|326672994|ref|XP_003199772.1| PREDICTED: transposon TX1 uncharacterized 149 kDa protein-like
           [Danio rerio]
          Length = 1451

 Score = 45.5 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 31/255 (12%), Positives = 65/255 (25%), Gaps = 28/255 (10%)

Query: 8   TWNVNSIRARIH--NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSY 65
           + N+N  R       L   IK  N D++ +QET ++  N      +     + T    S 
Sbjct: 162 SLNLNGARDIKKRMQLYELIKHKNIDVMYVQETHSDCSNTIDWEKEWEGKVVLTHTSFSR 221

Query: 66  NGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYD 125
            G AIL     + +   +                      +   N+Y P          +
Sbjct: 222 GGGAILFAKHFLPVSYQIEEVIAGRLVII---KTEFEKYRINFINVYAPTNGTERVIFLN 278

Query: 126 DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQK 185
              + ++         L  +         +         +  +                 
Sbjct: 279 SINTLLQNCRTDDYVFLGGDFNCTENERLDRNHVEPHANSSRVLRELIET---------- 328

Query: 186 LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTK 244
                  D  R  +     Y++      +      + R+D         +++    I   
Sbjct: 329 ---HSLCDIWREFNGNVKQYTW----LHTRENFISMARLDRFYCFKHHVNVVRKCEIVP- 380

Query: 245 PRGWTKPSDHTPVIV 259
                  +DH+ V+ 
Sbjct: 381 ----VGFTDHSLVLC 391


>gi|160884186|ref|ZP_02065189.1| hypothetical protein BACOVA_02163 [Bacteroides ovatus ATCC 8483]
 gi|237721815|ref|ZP_04552296.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|298479959|ref|ZP_06998158.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. D22]
 gi|156110528|gb|EDO12273.1| hypothetical protein BACOVA_02163 [Bacteroides ovatus ATCC 8483]
 gi|229448684|gb|EEO54475.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|298273768|gb|EFI15330.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. D22]
          Length = 575

 Score = 45.5 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 32/251 (12%), Positives = 76/251 (30%), Gaps = 20/251 (7%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
             + +AT N+      +  +  +    + D++C QE      N     +Q+   ++ T  
Sbjct: 299 KTLKLATQNLWGKSTSV--VLDYFNRIDVDVLCAQEC----SNLSESDIQAQGLYVHTHS 352

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
                  +I+S+Y    I  +  G  +D+    +      +      G   L        
Sbjct: 353 NNRQGKCSIISRYPFSGITPNKYGVYIDLGDGIVVLVMNCHGAFYPYGPYQLNGIAYEGY 412

Query: 122 TKYDDKISWIKRFLRFASQRLEL--EEPLIFAGDYNIIPQPHDCYNPIIWENDA------ 173
              DD    +K         ++   E+       +  +    +  + + W   A      
Sbjct: 413 EGTDDVDYVVKVNKEARQGMVDKLLEDFNSSTTPFVCLSGDFNEPSWLDWTEGALKAELA 472

Query: 174 ---CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230
                    R  ++          I     TH  +++    +    K+   R+D  + + 
Sbjct: 473 PYVVQWPTTRSLWEGGIKGDAYRTIHPDPVTHPGFTWTPRPS---EKDTRDRLDLTLYTL 529

Query: 231 EATSLLHSARI 241
              + + S ++
Sbjct: 530 SPNTEVKSCQV 540


>gi|327537315|gb|EGF24049.1| endonuclease/exonuclease/phosphatase family protein [Rhodopirellula
           baltica WH47]
          Length = 275

 Score = 45.5 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 38/286 (13%), Positives = 72/286 (25%), Gaps = 61/286 (21%)

Query: 7   ATWNVNSIRA---------RIHNLAAWIKENNPDIICLQETKTE---------------- 41
            T+NV  +           R   +   I     D+  LQE   +                
Sbjct: 21  MTYNVRYLNTHDRQDLWSMRRSKVIETIAS--ADVAGLQEVTVQQLHDIQEGTPEWTWYG 78

Query: 42  ---DKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT 98
              D          + Y      +   +G   LS+   +                 +   
Sbjct: 79  VGRDDGKEGGEFAPIGYR-HDRFEAMDHGTLWLSETPTVVGSKGWDAALPRTMTWMVLRR 137

Query: 99  FTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP 158
                + L I + +   G                R +     +   + P+I  GD+N +P
Sbjct: 138 KLDRAEFLVINSHFDHRGQNA--------REQSGRLVAAEVDQRATDLPVIVMGDFNAMP 189

Query: 159 QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN 218
                      E             +     G  +  +A                     
Sbjct: 190 DSAPLKALQSGEKVKLLDARDEVDGKPTGPTGTWNGFKAIQPD----------------- 232

Query: 219 KGIRIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSLDI 263
              RIDH++++      +   R +D +       SDH P+ + +D+
Sbjct: 233 --RRIDHVLVNDRVV--VQEYRTLDPRTEAGRYASDHLPIAIRIDL 274


>gi|306826582|ref|ZP_07459889.1| RgfB protein [Streptococcus pyogenes ATCC 10782]
 gi|304431220|gb|EFM34222.1| RgfB protein [Streptococcus pyogenes ATCC 10782]
          Length = 272

 Score = 45.5 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 38/276 (13%), Positives = 87/276 (31%), Gaps = 20/276 (7%)

Query: 3   VVTVATWNVNSIRAR--IHNLAAW---IKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57
           +  V T N +S      +  L A    I     DIICLQE    ++    E    L  + 
Sbjct: 1   MTKVLTLNTHSWMQANTLKKLVALAEHILAEKYDIICLQEI---NQLIESELATDLPRYQ 57

Query: 58  E-----TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
                 +  +  +  + I    +  +        +      + E    ++ Q + + ++ 
Sbjct: 58  ALSGTPSIHKDHFALLLIHYLQKRGQHYYWSWAYNHIGYDIYQEGVAILSKQPIHVSDIL 117

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLI---FAGDYNIIPQPHDCYNPIIW 169
           +   +  T       +    R        + +        F G++  + +     N  + 
Sbjct: 118 VSAMDDETDYHTRRSLIAKTRLDGKEVAVVNVHLSWFDKGFLGEWEKLEKELLTLNCPLL 177

Query: 170 ENDACFTLEVRQSFQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227
                     +  +Q +    +   D+ +        +S            + +++DH+ 
Sbjct: 178 LMGDFNNPTAQDGYQVMMGSPLDLQDSHKVADHVFGDHSIVADIDGWQGNKEALKVDHVF 237

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            S +    + S++I  +       SDH  + V+LD 
Sbjct: 238 TSKDCI--IRSSKITFEGGDAPVVSDHYGLEVTLDW 271


>gi|302518572|ref|ZP_07270914.1| endonuclease/exonuclease/phosphatase [Streptomyces sp. SPB78]
 gi|302427467|gb|EFK99282.1| endonuclease/exonuclease/phosphatase [Streptomyces sp. SPB78]
          Length = 253

 Score = 45.5 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 32/271 (11%), Positives = 72/271 (26%), Gaps = 49/271 (18%)

Query: 2   SVVTVATWNVNSIR---ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           +VV V ++N+ S+R   A +  +   I+  +PD++ +Q                      
Sbjct: 23  AVVRVLSYNIRSMRDDTAALGRV---IRACDPDLVLIQ-------------------EAP 60

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
              +       +      + +          +               L +       G  
Sbjct: 61  RFFRWRKALARLARSAGLVTLAGGATAAGPALLCSLRATVERTEDVLLPLTPGLHRRGFS 120

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
               ++      +       +     ++  +                 ++   D     E
Sbjct: 121 TAVVRFGAARLGVVSCHLSLA-----KDERLAQARLLTERAERLGAPHVLVGGDLNEGPE 175

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
            +        +    A+R        ++       S ++N   RID + +S      +  
Sbjct: 176 GKAFRHVAGRLRDAWAVRPW---GGEFT-------STAENPYQRIDAMFVSEGVE--VLG 223

Query: 239 ARI----DTKPRGWTKPSDHTPVIVSLDIPE 265
             +    D   R     SDH PV+  L +P 
Sbjct: 224 CGVPTLEDADVRA---ASDHVPVLAVLRLPA 251


>gi|282859591|ref|ZP_06268695.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           bivia JCVIHMP010]
 gi|282587642|gb|EFB92843.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           bivia JCVIHMP010]
          Length = 326

 Score = 45.5 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 33/258 (12%), Positives = 61/258 (23%), Gaps = 44/258 (17%)

Query: 30  PDIICLQETKTEDKNFPFET-----LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLP 84
           PD++ L E   E+    F+      L+   Y           G+ +              
Sbjct: 84  PDVVGLCEV--ENDTVLFDLTKRSLLRKARYEYVMTQSADERGIDVALL-------YSPF 134

Query: 85  GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL 144
              L                T  I ++     +  T   +                    
Sbjct: 135 SFRLLKADTIRIIPMKGMKPTRDILHVMGEIPSSDTLHVFLVHAPSRSGGELQTRPYRLH 194

Query: 145 EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL 204
               +     +I          I+ + +        Q       +  +   + TH     
Sbjct: 195 IAKQLACSIDSIKAIDVHAKMLIMGDFNDYSDSPSLQKLYVHNMLDVSANAQGTHGAKAT 254

Query: 205 YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKP------------------- 245
           Y +       W       +DHI++S    S +    I+  P                   
Sbjct: 255 YRY----QGEWGS-----LDHILVSGNLLSNVKDCYINDAPFLLEPDTKYGGVKPRRNYN 305

Query: 246 --RGWTKPSDHTPVIVSL 261
             R     SDH P+++ L
Sbjct: 306 GMRYNHGFSDHLPLVLKL 323


>gi|38073480|gb|AAR10849.1| MP100 [Trypanosoma cruzi]
          Length = 925

 Score = 45.5 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 30/290 (10%), Positives = 71/290 (24%), Gaps = 40/290 (13%)

Query: 2   SVVTVATWNV-------------------NSIRARIHNLAAWIKENNPDIICLQETKTED 42
           + + + TWNV                    S + R   LA  I++ + D++ +QE     
Sbjct: 646 TTLKLLTWNVMFDRYSGKPTPLGMPGIDWCSPK-RYPVLARVIQQEDADVVGMQEV---- 700

Query: 43  KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN 102
           +   +E L    +  E            +S +  + +V         +    + A     
Sbjct: 701 EPVFWEFLSKQPWMRENYYFSCGYTSPSISPWGVLMLVHRRRFPVQSITYLNVPAWTNHV 760

Query: 103 TQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD 162
           +    +          + +       +      R +         L       +     +
Sbjct: 761 SLMPVVCLQLPHGPVHVAAAHLLAPYTKSHETARTSQDSALRHHMLKTLTGDVVTMGDFN 820

Query: 163 CYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR 222
            +    +   A               +           T       + +     K     
Sbjct: 821 DWPTNEFLMPAESQYVDCWPLIYHTMLENDGRDEYILQTECKLKVEEMFFGRSDK----- 875

Query: 223 IDHIMLSPEATS---------LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
               + S               ++    + +  G+  PSDH  V ++  +
Sbjct: 876 --LFLRSRRLAPVEGHLVGTKSVNDENGNKEAPGYLFPSDHYGVSMTFAL 923


>gi|307308162|ref|ZP_07587877.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium meliloti
           BL225C]
 gi|306901365|gb|EFN31970.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium meliloti
           BL225C]
          Length = 265

 Score = 45.5 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 4/53 (7%)

Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDS 273
           +RIDH+++       + S R+          SDH P++  LD+   R KQ+ S
Sbjct: 217 LRIDHVLIGKGIE--VASCRVHGSTLAR-SASDHLPLLAELDVVM-RDKQEPS 265



 Score = 40.5 bits (93), Expect = 0.26,   Method: Composition-based stats.
 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 5/40 (12%)

Query: 4  VTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQET 38
          +   T+NV+S      R     +AA I E  PD+I LQE 
Sbjct: 21 IRFLTYNVHSCFGTDRRLDPARIAAVIAECQPDVIALQEV 60


>gi|302884128|ref|XP_003040961.1| hypothetical protein NECHADRAFT_54591 [Nectria haematococca mpVI
           77-13-4]
 gi|256721855|gb|EEU35248.1| hypothetical protein NECHADRAFT_54591 [Nectria haematococca mpVI
           77-13-4]
          Length = 303

 Score = 45.5 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 36/285 (12%), Positives = 86/285 (30%), Gaps = 26/285 (9%)

Query: 4   VTVATWNVN-----SIRA---------RIHNLAAWIKEN---NPD-IICLQETKTEDKNF 45
           + + T+N+      S RA         R  ++AA +       PD ++C+QE  T  +  
Sbjct: 25  LRLMTYNIRYQVEPS-RAEDGEELWPLRRPHMAAQLNYELAGRPDSLVCMQEV-TYPQAL 82

Query: 46  PFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT 105
                   ++ +   G++       LS       + +L        +R  +   +     
Sbjct: 83  DLMDDFGEDWALIGGGRRDGAKKGELSPIFYRRSIWNLEQTKTYWLSRTPDKAGSKGWDA 142

Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165
                + +     + +      +     +    SQ       +  A  ++   +      
Sbjct: 143 ELPRVVTVGRFRHLHTGARVVYMCTHFDWKGKKSQGHSAAMIIDLADRWSSHKRESLPVF 202

Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225
                N    +        +L ++ +             Y+ +        ++  + +DH
Sbjct: 203 VAGDLNATPDSPAYNLLATQLYDLKYQVPSSKRFGHQKTYTGFSV-----DESDDMDLDH 257

Query: 226 IMLSPEATSLLHSARIDTKPRGWTKP-SDHTPVIVSLDIPEPRKK 269
           + +         S  +           SDH PV+V ++I +  +K
Sbjct: 258 MFVRDPMDISFKSFAVLNTRYDDGIFISDHRPVVVDMEITQIARK 302


>gi|318057512|ref|ZP_07976235.1| hypothetical protein SSA3_06214 [Streptomyces sp. SA3_actG]
          Length = 250

 Score = 45.5 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 32/271 (11%), Positives = 72/271 (26%), Gaps = 49/271 (18%)

Query: 2   SVVTVATWNVNSIR---ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           +VV V ++N+ S+R   A +  +   I+  +PD++ +Q                      
Sbjct: 20  AVVRVLSYNIRSMRDDTAALGRV---IRACDPDLVLIQ-------------------EAP 57

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
              +       +      + +          +               L +       G  
Sbjct: 58  RFFRWRKALARLARSAGLVTLAGGATAAGPALLCSLRATVERTEDVLLPLTPGLHRRGFS 117

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
               ++      +       +     ++  +                 ++   D     E
Sbjct: 118 TAVVRFGAARLGVVSCHLSLA-----KDERLAQARLLTERAERLGAPHVLVGGDLNEGPE 172

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
            +        +    A+R        ++       S ++N   RID + +S      +  
Sbjct: 173 GKAFRHVAGRLRDAWAVRPW---GGEFT-------STAENPYQRIDAMFVSEGVE--VLG 220

Query: 239 ARI----DTKPRGWTKPSDHTPVIVSLDIPE 265
             +    D   R     SDH PV+  L +P 
Sbjct: 221 CGVPTLEDADVRA---ASDHVPVLAVLRLPA 248


>gi|296130593|ref|YP_003637843.1| Endonuclease/exonuclease/phosphatase [Cellulomonas flavigena DSM
          20109]
 gi|296022408|gb|ADG75644.1| Endonuclease/exonuclease/phosphatase [Cellulomonas flavigena DSM
          20109]
          Length = 232

 Score = 45.5 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 9/35 (25%), Positives = 19/35 (54%)

Query: 3  VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQE 37
           + V T+N+  +R  +  L   ++   PD++ +QE
Sbjct: 8  TLRVMTYNLRGLREEVDALVDVVRAARPDVLAVQE 42



 Score = 43.2 bits (100), Expect = 0.039,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 3/45 (6%)

Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEP 266
           RID +++       +  AR+          SDH P++V L +PEP
Sbjct: 191 RIDAVLVDERLP--VLGARV-PDEAAVGVASDHRPLVVDLHLPEP 232


>gi|83591541|ref|YP_425293.1| endonuclease/exonuclease/phosphatase [Rhodospirillum rubrum ATCC
           11170]
 gi|83574455|gb|ABC21006.1| Endonuclease/exonuclease/phosphatase [Rhodospirillum rubrum ATCC
           11170]
          Length = 264

 Score = 45.5 bits (106), Expect = 0.009,   Method: Composition-based stats.
 Identities = 41/273 (15%), Positives = 78/273 (28%), Gaps = 49/273 (17%)

Query: 4   VTVATWNVNSI----RARIH-NLAAWIKENNPDIICLQETKT-----EDKNFPFETLQSL 53
           + V  WN++      R R    +A  +   +PD++ LQE        E ++      ++ 
Sbjct: 26  LRVVCWNLHGCVGTDRRRDPSRVAKALAVLSPDVVGLQEVDLRRHPGEAEDPLTLIARAT 85

Query: 54  NYHIETCGQKSY----NGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
                            G AILS++  +  +            R ++AT       LR+ 
Sbjct: 86  GMRAVHSPTLKRDGGAYGNAILSRWPVVAALPLDLSVPGCEPRRAMDATLEHPAGPLRVM 145

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
             +L  G      +       + R L  A  R      ++       +P           
Sbjct: 146 VTHLGLGRKERRWQVGRLGERLSRPLAGADGRDAHHPLILMGDFNEWLPWGQT------- 198

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
                    V                 +                       +R+D +++ 
Sbjct: 199 --------AVAGLKTWFDADCSRRTFPSWLPI-------------------LRLDRLLVR 231

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
           P     L       + +G  + SDH P++V L+
Sbjct: 232 PS-PRRLTPWPTLPQGQGIRRASDHLPLVVDLE 263


>gi|253999039|ref|YP_003051102.1| Endonuclease/exonuclease/phosphatase [Methylovorus sp. SIP3-4]
 gi|253985718|gb|ACT50575.1| Endonuclease/exonuclease/phosphatase [Methylovorus sp. SIP3-4]
          Length = 244

 Score = 45.2 bits (105), Expect = 0.009,   Method: Composition-based stats.
 Identities = 35/281 (12%), Positives = 77/281 (27%), Gaps = 46/281 (16%)

Query: 1   MSVVTVATWNVNSIRA--------RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52
           MS + +  +N++  R+        RIH+L   ++  + D   +QE          ET  S
Sbjct: 1   MSRMRLLCFNIHGGRSLDGQRDLQRIHHL---MQRLDIDAGVIQE---------METRPS 48

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
                    + +            +       G+ +  +   +            +    
Sbjct: 49  RGGQPNDVERVAGPERPFHLICPSMLEGQGWYGNLIVSRYPIVRGLIHNLETRPSLEPRM 108

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                          I        +  +        +            +  +P++   D
Sbjct: 109 AADALIAGPHGNLRVIGTHLSLSIYERRSEARNLIRLI------QAVEEETKSPLLLMGD 162

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                      + L         +AT  +                   +R+D +      
Sbjct: 163 INEWQRPSALLRFLDGHLTPVPCKATFPSLCPV---------------LRLDRVWY-EAE 206

Query: 233 TSLLHSARID-TKPRGWTKPSDHTPVIVSLDIPEPRKKQQD 272
              + + RID    R   + SDH P+++ L+ PEP  +++ 
Sbjct: 207 GIKITAHRIDGNDIR---RLSDHLPIVIELEWPEPWPEKRT 244


>gi|260641834|ref|ZP_05413661.2| Ser/Thr protein phosphatase family protein [Bacteroides finegoldii
           DSM 17565]
 gi|260624593|gb|EEX47464.1| Ser/Thr protein phosphatase family protein [Bacteroides finegoldii
           DSM 17565]
          Length = 611

 Score = 45.2 bits (105), Expect = 0.009,   Method: Composition-based stats.
 Identities = 34/278 (12%), Positives = 77/278 (27%), Gaps = 58/278 (20%)

Query: 3   VVTVATWNV---NSIRARIH------NLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
            + + T+N+   N     +        +A  I   +PD++ +QE                
Sbjct: 25  TLRLMTYNIKNANG----MDDICSFQRVANVINNASPDVVAIQEV--------------- 65

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
                T        +  +++   +        +    +      T  +    LR+  + L
Sbjct: 66  --DSMTRRSGQKYVLGEIAERTQMHACFAPAIEFEGGKYGIGLLTKQVP---LRLQTIPL 120

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
           P      +    +   +I      +    +  + L     +    +        +     
Sbjct: 121 PGREEARTLILAEFEDYIYCCTHMSLTEKDRMKSLEVVKSFVAPYKKPLFLAGDMNAEPE 180

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI--MLSPE 231
              ++  Q   ++ +        A+                        ID+I  + S  
Sbjct: 181 SDFIKELQKNFQMLSNPKQSTYPASDPKET-------------------IDYITALKSNA 221

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKK 269
               L S+++  +P      SDH P++V L   E   K
Sbjct: 222 NGFALISSQVLDEPM----ASDHRPILVELRTAEKADK 255


>gi|218460525|ref|ZP_03500616.1| putative endonuclease/exonuclease/phosphatase family protein
           [Rhizobium etli Kim 5]
          Length = 74

 Score = 45.2 bits (105), Expect = 0.009,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 22/64 (34%)

Query: 223 IDHIMLSPEAT--------SLLHSA-----------RIDTKPR-GWTKP--SDHTPVIVS 260
           +D+I LSP            ++ +             ++  PR GW +P  SDH PV+++
Sbjct: 11  LDYIWLSPALAAHNSGRLPDIIRNGQPYRTVFPPGQEVERYPRTGWDRPKASDHCPVVMT 70

Query: 261 LDIP 264
           LD+P
Sbjct: 71  LDLP 74


>gi|94957778|gb|ABF47139.1| inositol phosphorylsphingolipid-phospholipase C [Cryptococcus
           neoformans var. neoformans]
          Length = 529

 Score = 45.2 bits (105), Expect = 0.009,   Method: Composition-based stats.
 Identities = 39/241 (16%), Positives = 70/241 (29%), Gaps = 20/241 (8%)

Query: 15  RARIHNLAAWIKENNPDIICLQETKT-EDKNFPFETLQ-SLNYHIETCGQKSYNGVAILS 72
           R RIH +A ++  ++ DI+CLQE    +D     E +Q +L +          +G+AI +
Sbjct: 32  RTRIHAIADYLASSSYDIVCLQELWIYKDYEVVREAVQRNLPFSRFFHTGALGSGLAIFT 91

Query: 73  KYQPIEIV-----------THLPGDDLDVQARFIEATFTINTQTLRIGNLYLP-HGNPIT 120
           ++  I                  GD    +A             + I N ++   G    
Sbjct: 92  RFPLIAAHALPYSLSGSPAQAFAGDFFVKKAAANVVILHPVLGEVEIWNTHMHAAGEHPP 151

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW------ENDAC 174
            T+   +I+                  +   GD+N  P                      
Sbjct: 152 DTRQAHRIAQSWELANAVRGGAAKGRYVFVMGDFNSQPWSIPIAMMRDHAQLMDSFGQVH 211

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
            +     S                    + YS      +   +  G R+D+I     A +
Sbjct: 212 PSTNSEISPPPSPAEALRVYGMTCDSPLNTYSAGKPIPEHVLEKGGKRLDYIFFRQPAIA 271

Query: 235 L 235
            
Sbjct: 272 R 272


>gi|320158664|ref|YP_004191042.1| metal-dependent hydrolase [Vibrio vulnificus MO6-24/O]
 gi|319933976|gb|ADV88839.1| metal-dependent hydrolase [Vibrio vulnificus MO6-24/O]
          Length = 297

 Score = 45.2 bits (105), Expect = 0.009,   Method: Composition-based stats.
 Identities = 42/296 (14%), Positives = 86/296 (29%), Gaps = 61/296 (20%)

Query: 4   VTVATWNVNSIR----ARIH----------NLAAWIKENNPDIICLQET-------KT-- 40
           +T  +WN+  +     AR+            LA + ++ N D++  QE        K   
Sbjct: 28  MTFTSWNMEWLSSTPSARVKESHRNEEDFAKLAMYFQKTNSDVLAFQEVNDLAAIKKVVG 87

Query: 41  EDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIE----IVTHLPGDDLDVQARFIE 96
            +    F    +  Y        +      + K  P      I  +     L   +  I 
Sbjct: 88  TNYQILFSDRSNPRYQRFQFDDINQYTGFAIKKGIPFRDVGDIQLNKGNSKLRFASYVII 147

Query: 97  ATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI 156
              +     L +       G    +          +   ++ SQR   ++  +  GD+N 
Sbjct: 148 GNTSNEIHVLNVHLKAGCSGAYKGNDACRTLRLESQALGQWISQRQNNKQNYLVLGDFNH 207

Query: 157 IPQPHDCYNPIIWE--NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADS 214
                + +               E  ++  K+++    + +              + +  
Sbjct: 208 NLAYRNDWLMNELTSAGKIHLLTEDTKANCKVRSKKQPNKVH------------SFRSL- 254

Query: 215 WSKNKGIRIDHIMLSPEA------TSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
                   IDHI++S           L  S  +        + SDH PV  ++ +P
Sbjct: 255 --------IDHIIVSEGLSASQAEQKLFTSNDVLKY-----QLSDHCPVSTTVTLP 297


>gi|298204335|gb|ADI61816.1| endonuclease-reverse transcriptase [Bombyx mori]
          Length = 994

 Score = 45.2 bits (105), Expect = 0.009,   Method: Composition-based stats.
 Identities = 39/278 (14%), Positives = 75/278 (26%), Gaps = 20/278 (7%)

Query: 6   VATWNVNSIRARIHNLAAWIKE----NNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           +ATWNV  +        + +      +N  ++ L ET     N  F T      +I    
Sbjct: 37  IATWNVRGL--LQPGKLSIVDAESNNHNISVLGLSETHMR-GNGHFTTPSGGTLYISGSE 93

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
            KS NGV IL     ++ V         +    + A   I                 I  
Sbjct: 94  NKSANGVGILLPRDIVKHVLGYNPISDRIITIRLNAKPNILNIVQVYAPTEKAKEEDIDC 153

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
                    ++  L   S R        +                  +          R 
Sbjct: 154 F-----YESLEATLNTISNREITIILGDWNAKIGNTCNDDLPSIVGNFGLGVRNERGQRL 208

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
               ++           H    LY++      +  +N+   ID+I+++    S + + + 
Sbjct: 209 LDYCIERKFCIANTCFQHHPRRLYTWTS--PGARYRNQ---IDYILINSRWKSAIRNVKT 263

Query: 242 DTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMK 279
                G    +DH  ++    +       + +      
Sbjct: 264 FP---GAECGTDHNLLVARFTLRLKAASSRTTRGPRAL 298


>gi|254580597|ref|XP_002496284.1| ZYRO0C14872p [Zygosaccharomyces rouxii]
 gi|238939175|emb|CAR27351.1| ZYRO0C14872p [Zygosaccharomyces rouxii]
          Length = 496

 Score = 45.2 bits (105), Expect = 0.009,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 50/191 (26%), Gaps = 2/191 (1%)

Query: 17  RIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75
           R   L    K  N D+ICLQE    + ++F  + L  L Y  +   Q S N    +   +
Sbjct: 126 RSKVLLNEFKYYNADVICLQEIDYIQYQSFWKDELAKLGYDSQFHRQASKNHGVAIVWKR 185

Query: 76  PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135
              ++T     D D ++       T       I                      +    
Sbjct: 186 EYFVMTDKMLIDFDRESSGDIPPRTTTNNAGLI-LSLKFSDKVAQEHNLKKTGIIVGTTH 244

Query: 136 RFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAI 195
            F       E         N + +     N +   ND   +           +  F    
Sbjct: 245 LFWHPFGTFERTRQCYVVLNKVKEFSHRVNVLQNGNDGDHSHWYPFFCGDFNSQPFDSPY 304

Query: 196 RATHDTHHLYS 206
            +       YS
Sbjct: 305 LSMTRKPIEYS 315


>gi|159490372|ref|XP_001703153.1| MaoC-like dehydratase [Chlamydomonas reinhardtii]
 gi|158270783|gb|EDO96618.1| MaoC-like dehydratase [Chlamydomonas reinhardtii]
          Length = 1117

 Score = 45.2 bits (105), Expect = 0.009,   Method: Composition-based stats.
 Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 12/69 (17%)

Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPS 252
           D+ R  H T   ++F ++   S       RID IMLSPE  S L +           +PS
Sbjct: 114 DSFRHLHPTRRSFTFINHMGAS-------RIDRIMLSPELLSSLRACAHVPG-----RPS 161

Query: 253 DHTPVIVSL 261
           DH  V+ +L
Sbjct: 162 DHRLVVATL 170


>gi|111225231|ref|YP_716025.1| hypothetical protein FRAAL5881 [Frankia alni ACN14a]
 gi|111152763|emb|CAJ64506.1| hypothetical protein; putative membrane protein [Frankia alni
           ACN14a]
          Length = 356

 Score = 45.2 bits (105), Expect = 0.009,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 7/41 (17%)

Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           +RIDH++ SP     +   ++     G    SDH PVI  L
Sbjct: 320 LRIDHVLTSPAFA--VTGFQV-----GHDFGSDHLPVIADL 353


>gi|298483187|ref|ZP_07001367.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. D22]
 gi|298270704|gb|EFI12285.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. D22]
          Length = 305

 Score = 45.2 bits (105), Expect = 0.010,   Method: Composition-based stats.
 Identities = 42/270 (15%), Positives = 82/270 (30%), Gaps = 28/270 (10%)

Query: 4   VTVATWNV---N-------SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + V ++N+   N       S  AR       I E+ P +I +QE +     +  E  +  
Sbjct: 50  IKVMSFNIRYYNTKDTGEKSWEARTAAFIPMIGEHKPTVIGMQEARPPQLKWLEENWKDY 109

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL-RIGNLY 112
            Y  +     + N    +  +   + V  +  D   +              T+ RI    
Sbjct: 110 GYVGKGRRANNANNDEFVPIFYRKKAVELIKWDCFWLSETPDVPGSQGWDSTVPRIATWA 169

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
           +          +   I+         +    +E  +    + N    P         + D
Sbjct: 170 IFKHIASGKKFF--FINTHIDVGSTIAPGKSMEVIVNKMSELNPEGLPMLLTADFNKQID 227

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
           +     V+     +             D+ + Y+ +   A+ +       +DHI  +   
Sbjct: 228 SDIFNGVKTFMTNV------RLSAPITDSKYSYTGFGT-ANPYI------VDHIFCTG-- 272

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
              L    ID   +  T  SDH P+I  L+
Sbjct: 273 FKALKFETIDKVYQNITYISDHYPIIGKLE 302


>gi|158425166|ref|YP_001526458.1| endonuclease [Azorhizobium caulinodans ORS 571]
 gi|158332055|dbj|BAF89540.1| endonuclease [Azorhizobium caulinodans ORS 571]
          Length = 370

 Score = 45.2 bits (105), Expect = 0.010,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 22/58 (37%), Gaps = 17/58 (29%)

Query: 223 IDHIMLSPEATSLLHSARIDTK-----------------PRGWTKPSDHTPVIVSLDI 263
           ID+I+LSPE    + +  +  K                  R     SDH+ V V L +
Sbjct: 313 IDYILLSPELFGKVTAGGVFRKGAWPGSRPKRWDVYPEVARPADAASDHSAVWVDLAL 370


>gi|315221940|ref|ZP_07863851.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           anginosus F0211]
 gi|315188906|gb|EFU22610.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           anginosus F0211]
          Length = 736

 Score = 45.2 bits (105), Expect = 0.010,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 29/77 (37%), Gaps = 10/77 (12%)

Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT---K 250
            +   HD    YS++ Y   + S      +D+I +S         + +           +
Sbjct: 604 NMMLNHDAADRYSYF-YRGSNQS------LDNIFVSKNIADKTVFSPVHINASFMEEHGR 656

Query: 251 PSDHTPVIVSLDIPEPR 267
            SDH PVI  LD  + +
Sbjct: 657 ASDHDPVIAQLDFSQKK 673


>gi|151554255|gb|AAI49516.1| CCRN4L protein [Bos taurus]
          Length = 361

 Score = 45.2 bits (105), Expect = 0.010,   Method: Composition-based stats.
 Identities = 36/256 (14%), Positives = 64/256 (25%), Gaps = 28/256 (10%)

Query: 21  LAAWIKENNPDIICLQETKTEDKNFPFE--TLQSLNYHIETCGQKSYNGVAILSKYQPIE 78
           +   I    PDI+CLQE    D  F      L  L Y      +         S    +E
Sbjct: 113 ILEEILAYQPDILCLQEV---DHYFDTFQPLLSRLGYQGTFFPKP-------WSPCLDVE 162

Query: 79  IVTHLPGD--DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
                 G           +  +  I    + +    +     +   +   +       L+
Sbjct: 163 HNNGPDGCALFFLQNRFKLVNSANIRLTAMTLKTNQVAIAQTLECKESSRQFCIAVTHLK 222

Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN----MGFT 192
             +               N+         P+I   D               +        
Sbjct: 223 ARTGWERFRSAQGCDLLQNLQTITQGAKIPLIVCGDFNAEPTEEVYKHFASSSLNLNSAY 282

Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS------PEATSLLHSARIDTKPR 246
             + A   +   Y+ W        ++    +D+I  S        A  LL   +I     
Sbjct: 283 KLLSADGQSEPPYTTWKIRTSGECRHT---LDYIWYSRQALSVRSALDLLTEEQIGPNRL 339

Query: 247 -GWTKPSDHTPVIVSL 261
             +  PSDH  ++   
Sbjct: 340 PSFNYPSDHLSLVCDF 355


>gi|225856435|ref|YP_002737946.1| metal-dependent hydrolase [Streptococcus pneumoniae P1031]
 gi|225725346|gb|ACO21198.1| metal-dependent hydrolase [Streptococcus pneumoniae P1031]
          Length = 271

 Score = 45.2 bits (105), Expect = 0.010,   Method: Composition-based stats.
 Identities = 31/272 (11%), Positives = 71/272 (26%), Gaps = 14/272 (5%)

Query: 4   VTVATWNVNSI--RARIHNL---AAWIKENNPDIICLQETK-------TEDKNFPFETLQ 51
           +   T N  S   +            I E + D+IC QE          E  +       
Sbjct: 1   MKFLTLNTYSWMEKEAEEKFQILLEDILEKDYDLICFQEINQEMTSSEVEVNDLYQALPA 60

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
           +   H +   +     +    K        +  G D   +   I +   I  + + + ++
Sbjct: 61  AEPIHQDHYVRLLVEKLLEQGKNYYWTWAYNHIGYDRYHEGVAILSKTPIEAREILVSDV 120

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
             P           + +   K     +      ++                    ++  +
Sbjct: 121 DDPTDYHTRRVALAETVVDGKELAVASVHLSWWDKGFQEEWARFEAVLKKLNKPLLLAGD 180

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
                 +          +G  DA     +    Y+            + +RID++  + E
Sbjct: 181 FNNPAGQEGYQAILASPLGLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTTKE 240

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
               + +  +        + SDH  +   L+ 
Sbjct: 241 LA--VENLHVVFDGNKSPQVSDHYGLNAILNW 270


>gi|158312926|ref|YP_001505434.1| endonuclease/exonuclease/phosphatase [Frankia sp. EAN1pec]
 gi|158108331|gb|ABW10528.1| Endonuclease/exonuclease/phosphatase [Frankia sp. EAN1pec]
          Length = 314

 Score = 45.2 bits (105), Expect = 0.010,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 7/43 (16%)

Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +RIDH++ SP     +   ++     G    SDH PV   L +
Sbjct: 278 LRIDHVLASPAFA--VTGYQV-----GSEFDSDHKPVTADLAL 313


>gi|156836046|ref|XP_001642263.1| hypothetical protein Kpol_237p1 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156112746|gb|EDO14405.1| hypothetical protein Kpol_237p1 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 503

 Score = 45.2 bits (105), Expect = 0.010,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 52/184 (28%), Gaps = 2/184 (1%)

Query: 25  IKENNPDIICLQET-KTEDKNFPFETLQSLNYHIETCGQKSYN-GVAILSKYQPIEIVTH 82
            +  N D+ICLQE    + + F     + L Y  +     S N GVAI+ K +  ++   
Sbjct: 140 FQHYNSDVICLQEIDHIQYQAFWKVEFEKLGYESQFHRIASKNHGVAIVWKREMFKMTDR 199

Query: 83  LPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRL 142
           +  D     +  I      N   L +   +                  I     F     
Sbjct: 200 MLIDFDKETSSDIPPRTRTNNTGLILSLKFSDKILSTLPKNTKTTGIIIGTTHLFWHPFG 259

Query: 143 ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH 202
             E         N + +     N +   ND   +  V        +  F     +     
Sbjct: 260 TYERTRQCYVLLNKMKEFMHRVNVLQNGNDGDLSHWVPFFCGDFNSQPFDSPYLSMTSKP 319

Query: 203 HLYS 206
             Y+
Sbjct: 320 IEYT 323


>gi|284030291|ref|YP_003380222.1| endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836]
 gi|283809584|gb|ADB31423.1| Endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836]
          Length = 254

 Score = 45.2 bits (105), Expect = 0.010,   Method: Composition-based stats.
 Identities = 41/280 (14%), Positives = 72/280 (25%), Gaps = 43/280 (15%)

Query: 1   MS--VVTVATWN---------VNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFET 49
           MS   V V TWN         V+    R   + A ++   PD++ +QE     +      
Sbjct: 1   MSATTVRVMTWNLWWRFGPQWVD----RQEAILATLRAVGPDVVAVQE--AWPEQVETLA 54

Query: 50  LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTH---LPGDDLDVQARFIEATFTINTQTL 106
            + L  H    G        I     P+ +                        +    +
Sbjct: 55  -EQLGMHCRYAGPSYPPETDIARGDDPVSLGMGLLSRWPIADWKVRTMPARHRQLEPVAV 113

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
                +      + ++  + + ++    +       EL     + GD  +I        P
Sbjct: 114 VASLDHPQVTLHVVTSCLEYEPAFTDDRIAQTRLLAELATDPAYDGDAPVIVAGDLNAGP 173

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226
                   + +           +   D                            RIDHI
Sbjct: 174 TSRVLGPLYDVLRDAWTGDPDAITSPDEAGPDLRDQ-------------------RIDHI 214

Query: 227 MLSPEATSL---LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              P   S    +  A++   P     PSDH  V+  L  
Sbjct: 215 FYRPGTFSQEVEVTQAQLAGDPVDGITPSDHQAVVCDLRW 254


>gi|149708543|ref|XP_001488584.1| PREDICTED: angel homolog 2 (Drosophila) [Equus caballus]
          Length = 544

 Score = 45.2 bits (105), Expect = 0.010,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 5/63 (7%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73
           R  N+   IK  + D++CLQE   ++ ++  E    L+SL YH E   +           
Sbjct: 200 RFPNILKEIKHFDADVLCLQEV--QEDHYGTEIRPSLESLGYHCEYKMRTGRKPDGCAIC 257

Query: 74  YQP 76
           ++ 
Sbjct: 258 FKH 260


>gi|104779394|ref|YP_605892.1| DNAse I-like hydrolase [Pseudomonas entomophila L48]
 gi|95108381|emb|CAK13075.1| putative DNAse I-like hydrolase [Pseudomonas entomophila L48]
          Length = 284

 Score = 45.2 bits (105), Expect = 0.010,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 14/60 (23%)

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           +F  +            +DHI+LSP  T  L    +  +P      SDH PV V + +PE
Sbjct: 228 TFPSWRPQ-------RCLDHILLSPSLT--LERVEVLAQP-----ISDHLPVAVEIRLPE 273


>gi|55820291|ref|YP_138733.1| hypothetical protein stu0193 [Streptococcus thermophilus LMG 18311]
 gi|55736276|gb|AAV59918.1| conserved hypothetical protein [Streptococcus thermophilus LMG
           18311]
          Length = 290

 Score = 45.2 bits (105), Expect = 0.010,   Method: Composition-based stats.
 Identities = 28/272 (10%), Positives = 69/272 (25%), Gaps = 26/272 (9%)

Query: 2   SVVTVATWNVNSIRARIH----NLAAWIKEN----NPDIICLQETKTEDKNFPFETLQ-S 52
            ++   T N +S    +          +KE       DIIC QE    ++      ++  
Sbjct: 19  KIMKFLTLNTHS---WMEEDAEGKFQTLKEQILKAQYDIICFQEV---NQEIETAAVETD 72

Query: 53  LNYHIETCGQKSYNGVAIL---------SKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
             YH+       +    +                    +  G D   +   + +   +  
Sbjct: 73  AYYHVLPSATSIHQDHFVRLLVEKLAEEGLQYHWTWAYNHIGYDHLNEGVAVLSRQPLTA 132

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
             + + ++  P           +     +     +      ++                 
Sbjct: 133 SEILVSDVDDPTDYHTRRVAVAETTVDGREVAVASIHLSWWDKGFQEEWARIEERFQSIG 192

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223
              I+  +                 +   D+ +    T+  Y+            + +RI
Sbjct: 193 KPIILAGDFNNPAGREGYQTILASPLKLQDSFQVAQKTNGSYTVGPGIDGWKGNEEPLRI 252

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHT 255
           D++  S E    ++   +       +  SDH 
Sbjct: 253 DYVFASQEWA--VNRLSVIFDGNNQSLVSDHY 282


>gi|27367041|ref|NP_762568.1| putative phospholipase C [Vibrio vulnificus CMCP6]
 gi|27358609|gb|AAO07558.1| Putative phospholipase C [Vibrio vulnificus CMCP6]
          Length = 442

 Score = 45.2 bits (105), Expect = 0.010,   Method: Composition-based stats.
 Identities = 32/283 (11%), Positives = 72/283 (25%), Gaps = 43/283 (15%)

Query: 4   VTVATWNVNSIRA-------RIHNLAAWIKENNPDIICLQETKTE-DKNFPFETLQSLNY 55
           + + T+N+ ++ A       R   +  ++K    D++ LQE        F  E  +   Y
Sbjct: 178 LKIMTYNIWALPAIASHIGERFELIPDYVK--GYDVLALQEVFANGRDAFLRELAKEYPY 235

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
             +   +  +N             + +                         I       
Sbjct: 236 QTKMLDKDGFNIYDGGVIIVSRYPIVNQAQFVFPDCTGTDCFADKGVNYAEVIK------ 289

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
                   +    +          ++ + ++    A    I       Y+     N    
Sbjct: 290 -GGEAYHVFATHTASYDTDTARDYRQRQFKQMRALAQSLKIPANETVVYSGDFNVNK--- 345

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYS--FWDYYADSWS-------KNKGIRIDHI 226
                              + A    +  Y+   +D   ++++       +N    +D++
Sbjct: 346 ------RKFPSDYQQMIANLSAIEPHYSGYTESTFDPRINNFAGEPLSGGENVEY-LDYV 398

Query: 227 MLSPEAT---SLLHSARIDT----KPRGWTKPSDHTPVIVSLD 262
           M+S E        +   I              SDH PV   + 
Sbjct: 399 MVSNEYAVKGDNNNHVDIPRSTAESLWKHYNLSDHFPVSTVIK 441


>gi|262274141|ref|ZP_06051953.1| hypothetical protein VHA_001117 [Grimontia hollisae CIP 101886]
 gi|262221951|gb|EEY73264.1| hypothetical protein VHA_001117 [Grimontia hollisae CIP 101886]
          Length = 252

 Score = 45.2 bits (105), Expect = 0.010,   Method: Composition-based stats.
 Identities = 26/247 (10%), Positives = 57/247 (23%), Gaps = 18/247 (7%)

Query: 29  NPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIE-IVTHLPGDD 87
           + D++  QE   + +    + L    Y      +  +   +  S       +   +   D
Sbjct: 10  DADLVAFQEV--DSEASLSKVLNPTAYDFYFSDRTKHFNHSRRSHQFTGWAVKKGIKVVD 67

Query: 88  LDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEP 147
            +        TF           + +   N          +                +  
Sbjct: 68  HEDYQPLGLPTFLSRGNLRYGAYIEVKRENQPPLHLLSIHLKSGCFETPIRRNNSCKKLD 127

Query: 148 LIF-------AGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHD 200
                          +        +   + ND    +  +      ++            
Sbjct: 128 HQIEALSVWINARLKLGQDFIIAGDFNHYLNDKNEWVWKQLLLDVGEDNLVKLTKGTPAK 187

Query: 201 THHLYSFWDYYADSWSKNKGIR-IDHIMLSPEAT-----SLLHSARIDTKPRGWTKPSDH 254
                  ++Y    W      + IDHI+ S  A            +         + SDH
Sbjct: 188 CKARK--YNYRTKRWEHVVYQKLIDHIIASKGAVSALNPPQARQYQYSYHAVATYRLSDH 245

Query: 255 TPVIVSL 261
            P++V L
Sbjct: 246 CPIVVDL 252


>gi|83718560|ref|YP_442749.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           thailandensis E264]
 gi|257138960|ref|ZP_05587222.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           thailandensis E264]
 gi|83652385|gb|ABC36448.1| endonuclease/exonuclease/phosphatase family superfamily
           [Burkholderia thailandensis E264]
          Length = 286

 Score = 45.2 bits (105), Expect = 0.010,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 17/38 (44%), Gaps = 4/38 (10%)

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           D   ++      +    ID    G T+ SDH P+++ L
Sbjct: 250 DFAFVTDTLAHRISRCEID----GATRASDHQPIVLEL 283



 Score = 39.0 bits (89), Expect = 0.86,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 18/48 (37%), Gaps = 20/48 (41%)

Query: 4  VTVATWNV------NS-------IRARIHNLAAWIKENNPDIICLQET 38
          + + +WN+      N        I A    L  +      D++C+QE 
Sbjct: 1  MRLISWNIQWGRDANGTVDLARTIDAA-RGLGDF------DVLCMQEV 41


>gi|297160401|gb|ADI10113.1| hypothetical protein SBI_06993 [Streptomyces bingchenggensis BCW-1]
          Length = 255

 Score = 45.2 bits (105), Expect = 0.010,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 62/242 (25%), Gaps = 13/242 (5%)

Query: 31  DIICLQETKTE-DKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLD 89
           D++ LQE   + D+N      Q L  H       S            I+    +      
Sbjct: 11  DVLGLQEVWADGDENLAGWLAQRLGMHWTWAASDSPQKWQHRIGDPTIDFGNAVLSRWPI 70

Query: 90  VQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLI 149
            +               R+    L       +  +   ++           ++      I
Sbjct: 71  AERDVARLPAAGGPDDGRLALYALVDAPSHPAPFFTTHLNADLHESAVRCAQVTALARFI 130

Query: 150 FAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWD 209
                     P    +   W +     L                 +    D    ++ WD
Sbjct: 131 AERRGAGPFPPVVTGDYNAWPDSDEMRLLGGCRTAPAVPGQVLLDVWEYADPAAPWATWD 190

Query: 210 ----YYADSWSKNKGIRIDHIMLSPEATSLLHSAR-IDTKPRG-----WTKPSDHTPVIV 259
               Y A ++  +   RID+I + P     L   R +     G        PSDH  V+ 
Sbjct: 191 AANPYVARTFEPSV--RIDYIHVGPPGPDGLGHVRSVRRAGDGPVDEVGVWPSDHAAVVA 248

Query: 260 SL 261
            L
Sbjct: 249 EL 250


>gi|237749180|ref|ZP_04579660.1| endonuclease/exonuclease/phosphatase [Oxalobacter formigenes
           OXCC13]
 gi|229380542|gb|EEO30633.1| endonuclease/exonuclease/phosphatase [Oxalobacter formigenes
           OXCC13]
          Length = 264

 Score = 45.2 bits (105), Expect = 0.010,   Method: Composition-based stats.
 Identities = 45/281 (16%), Positives = 82/281 (29%), Gaps = 41/281 (14%)

Query: 4   VTVATWNVN---SI--RARIHNLAAWIKENNPDIICLQETKT-EDKNFPFETL--QSLNY 55
           + +AT+N++   SI  R  I  L   I+    D+I LQE +   D     + L  Q    
Sbjct: 3   LRIATYNIHKGASIDHRPIIQELKRSIRSLGADVIFLQEVQGRHDLQVNRQALLWQEQGQ 62

Query: 56  HIE-------------TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN 102
           H               +     ++G A+LS Y  +        D        +       
Sbjct: 63  HAYLAGDSLYCAYGKNSVYNYGHHGNALLSTYPIVSQFNQDVSDHALESRGILHCVLQTP 122

Query: 103 TQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD 162
              +    ++L   N     +    I  ++      +  +   +   +    +       
Sbjct: 123 ETKVYCYVIHLGLFNGSRIRQTRALIRTVQASAPKDAPVIIAGDFNDWNNKLSGFLMRTL 182

Query: 163 CYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR 222
               +  E D     +     +    +    A R        +                R
Sbjct: 183 QVKEVFDELDMKQNGKRSYFPRLTGQVPKPVAARTFPALFPFF----------------R 226

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +D I +       + SA +      WT  SDH P++ SL I
Sbjct: 227 LDRIYV-RGFE--VDSASVMQGS-PWTSLSDHAPLVASLRI 263


>gi|156974066|ref|YP_001444973.1| hypothetical protein VIBHAR_01777 [Vibrio harveyi ATCC BAA-1116]
 gi|156525660|gb|ABU70746.1| hypothetical protein VIBHAR_01777 [Vibrio harveyi ATCC BAA-1116]
          Length = 446

 Score = 45.2 bits (105), Expect = 0.010,   Method: Composition-based stats.
 Identities = 38/283 (13%), Positives = 82/283 (28%), Gaps = 43/283 (15%)

Query: 4   VTVATWNVNSIRA-------RIHNLAAWIKENNPDIICLQETKTE-DKNFPFETLQSLNY 55
           + + T+N+ ++ A       R   +  ++K    D++ LQE   +  + F  E  +   Y
Sbjct: 182 LKLVTYNIWALPAVASHIGDRYELIPEYVK--GYDVVALQEVFADGREAFLRELAKEYPY 239

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
             +   +  +N             + +         +               I    +  
Sbjct: 240 QTKMLDKDGFNIHDGGVTIVSRYPIVNQAQYVFPDCSSTDCFADKG------INYAEIIK 293

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
           G       +    +     +    ++ + ++    A   NI       Y+     N    
Sbjct: 294 GGQA-YHVFATHAASSDTDIAREHRQRQFKQMRAMAKSLNIPANETVVYSGDFNVNK--- 349

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYS--FWDYYADSWS-------KNKGIRIDHI 226
                              + A    +  Y+   +D   ++++        N    +D++
Sbjct: 350 ------LKFPGDYQQMIANLSAVEPEYSGYTASTFDPRINNFAGKALSGGDNVEY-LDYV 402

Query: 227 MLSPEA-TSLLHSARID----TKPRGWTK--PSDHTPVIVSLD 262
           M+S E      +  R+D    T    W     SDH PV   L 
Sbjct: 403 MVSSEYGAKSFNDNRVDVPRSTAASLWKHYNLSDHFPVSTVLK 445


>gi|221068733|ref|ZP_03544838.1| Endonuclease/exonuclease/phosphatase [Comamonas testosteroni KF-1]
 gi|220713756|gb|EED69124.1| Endonuclease/exonuclease/phosphatase [Comamonas testosteroni KF-1]
          Length = 291

 Score = 45.2 bits (105), Expect = 0.010,   Method: Composition-based stats.
 Identities = 41/303 (13%), Positives = 89/303 (29%), Gaps = 58/303 (19%)

Query: 4   VTVATWNV------NSIRARIHNLAAWIK-ENNP---DIICLQETKT-------EDKNFP 46
           + + +WNV      +   +    +   ++        D++CLQE          +  + P
Sbjct: 1   MNILSWNVQWCCGMDGQVSVERIVRHALQMGEQAGGLDVLCLQEIAVNYPDLQGQPGDQP 60

Query: 47  FETLQSL-NYHIET--------CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA 97
            E    L  + I                 G  + ++   +++  H      D   R ++ 
Sbjct: 61  AELKALLPGWQIVFGASVDEFTSRGHQRFGNLVATRLPLLQLQHHPLPMPADADVRCMQR 120

Query: 98  TFTINTQ------TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFAS------------ 139
             ++ T        +RI   +L + +          +  ++      +            
Sbjct: 121 MCSVVTVADAALGPVRIMTTHLEYFSKRQRMAQAGALRDLQMQACALADAPPQPASDGSP 180

Query: 140 -QRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT 198
            Q        +  GD+N  P   +                       LQ   + ++    
Sbjct: 181 YQTKPHTRHAVLCGDFNFEPHEPEYA--------VLSAPWAAGEQGCLQAGQWRNSWDLL 232

Query: 199 HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVI 258
           H        +     +W    G   D + +S      + + R+D      T+ SDH PV+
Sbjct: 233 HPGQPQPPTFRLVDRTWGAEPGA-CDLLWVSDSLCQHVQAWRVD----STTEASDHQPVM 287

Query: 259 VSL 261
           ++L
Sbjct: 288 LTL 290


>gi|319745959|gb|EFV98242.1| RgfB protein [Streptococcus agalactiae ATCC 13813]
          Length = 276

 Score = 45.2 bits (105), Expect = 0.010,   Method: Composition-based stats.
 Identities = 42/285 (14%), Positives = 81/285 (28%), Gaps = 38/285 (13%)

Query: 2   SVVTVATWN------VNSIRARIHNLAAW---IKENNPDIICLQETKTEDKNFPFETLQS 52
           S+    T N      VN     +  L      I     DIICLQE              S
Sbjct: 5   SMAKCLTLNTHSWMEVN----ALKKLFDLAEHIFREKYDIICLQEV--NQSISSPLAKSS 58

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
            NYH        +     L     +    +L G        +    ++   + + I +L 
Sbjct: 59  PNYHPIEGTPALHQDNFAL----QLVHYLNLQGLHYHWTWAYNHIGYSKYHEGVAILSLK 114

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
               + I  +  DD+  +  R    A   L  +   + +   ++                
Sbjct: 115 PLKPDDILVSAVDDETDYHTRRALVAETTLNDKVVTVVS--LHLSWFEKGFAEEWKRLET 172

Query: 173 ACFTLEVRQSFQKLQNMGF---------------TDAIRATHDTHHLYSFWDYYADSWSK 217
               +E         N                   D+ +  +     ++           
Sbjct: 173 TLLEVETPLLLMGDFNNPTGNQGYELVLNSPLALKDSHQIANHVFGDHTIMADIDGWEGN 232

Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
            K +++DHI  S +    + S+++  +       SDH  + +++D
Sbjct: 233 KKALKVDHIFTSEDL--SISSSQVVFEGGEAPVVSDHYGLEITID 275


>gi|241954618|ref|XP_002420030.1| endonuclease/exonuclease/phosphatase family protein, putative
           [Candida dubliniensis CD36]
 gi|223643371|emb|CAX42248.1| endonuclease/exonuclease/phosphatase family protein, putative
           [Candida dubliniensis CD36]
          Length = 362

 Score = 45.2 bits (105), Expect = 0.010,   Method: Composition-based stats.
 Identities = 33/256 (12%), Positives = 67/256 (26%), Gaps = 30/256 (11%)

Query: 32  IICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQ 91
           IICLQE    ++    + L+ LN   E             S               ++  
Sbjct: 117 IICLQEV-LHNQLL--DILEGLNEIEEWNYYGVGRTDGKTSGEYAPIFYKDKDFKIIENS 173

Query: 92  ARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFA 151
             ++  T  I ++        +       S         I          +   +     
Sbjct: 174 TFWLSPTPNIPSKGWDAALERIVTMVTFESRLNPQIKFNIFNTHYDHRGIIARRKSSQLI 233

Query: 152 GDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYY 211
            D       +  +    +  +         +    ++        + +     ++ +D  
Sbjct: 234 VDKMKNYNDYPSFLCGDFNTEPNDEPYHILTTAGFKDGKILIDKNSAYGFETTFTGFD-- 291

Query: 212 ADSWSKNKGI-RIDHIMLSPEATSL-------------------LHSARIDTKPRGWTKP 251
                 N+ I RID+I  SP  T                     L    I +        
Sbjct: 292 ----INNEPISRIDYIW-SPAFTHTSLSSENETGNDSDDTYEVTLKQFGILSNWFNGHHF 346

Query: 252 SDHTPVIVSLDIPEPR 267
           SDH PV+ + ++ + +
Sbjct: 347 SDHRPVVSTYELRKKK 362


>gi|90577899|ref|ZP_01233710.1| Exodeoxyribonuclease III [Vibrio angustum S14]
 gi|90440985|gb|EAS66165.1| Exodeoxyribonuclease III [Vibrio angustum S14]
          Length = 268

 Score = 45.2 bits (105), Expect = 0.010,   Method: Composition-based stats.
 Identities = 39/276 (14%), Positives = 78/276 (28%), Gaps = 25/276 (9%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQETK----------TEDKNFPFE 48
           + + T N +S +      ++  +A  I E + D+I LQE            +   NFP  
Sbjct: 1   MKLLTLNTHSWQEQDQLEKLDVVAKAIIEQDCDVIALQEVNQRYDSSIINASTVSNFP-- 58

Query: 49  TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108
            + S NY      +    G      +  +     +  + L   +R       +       
Sbjct: 59  -VHSDNYAYLLQQRLLVLGHQYYLTWDFVHQSYDVYQEGLAFLSREPVIEHQVIDLNDNY 117

Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168
              +  H   +  T      +                                       
Sbjct: 118 DEKHWKHRRAVRITLGYKDQTLDIYNCHCGWWNDIESPFQQHIERIKSCLSGRLSLFLGD 177

Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK-GIRIDHIM 227
           +   +    E      +   +    + +   D + +    D     W  N   +RID++ 
Sbjct: 178 FNTPSHLVDEGYSYLIQQGFIDTYTSAQMKDDGNTVVKCID----GWQNNHEALRIDYVF 233

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            +      + S ++      +   SDH  +IVSLD+
Sbjct: 234 SNQNV--SVSSHKVIFNGDYYPIVSDHFGLIVSLDL 267


>gi|332076038|gb|EGI86504.1| endonuclease/Exonuclease/phosphatase family protein [Streptococcus
           pneumoniae GA41301]
          Length = 260

 Score = 45.2 bits (105), Expect = 0.010,   Method: Composition-based stats.
 Identities = 28/242 (11%), Positives = 66/242 (27%), Gaps = 9/242 (3%)

Query: 21  LAAWIKENNPDIICLQETK-------TEDKNFPFETLQSLNYHIETCGQKSYNGVAILSK 73
           L   I E + D+IC QE          E  +       +   H +   +     ++   K
Sbjct: 12  LLEDILEKDYDLICFQEINQEMTSSEVEVNDLYQALPAAEPIHQDHYVRLLVEKLSEQGK 71

Query: 74  YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKR 133
                   +  G +   +   I +   I T+ + + ++  P           + +   K 
Sbjct: 72  NYYWTWAYNHIGYNRYHEGVAILSKTPIETREILVSDVDDPTDYHTRRVALAETVVDGKE 131

Query: 134 FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTD 193
               +      ++                    ++  +      +          +G  D
Sbjct: 132 LAVASVHLSWWDKGFQEEWARFEAVLKKLNKPLLLAGDFNNPAGQEGYQAILASPLGLQD 191

Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253
           A     +    Y+            + +RID++  + E    + +  +        + SD
Sbjct: 192 AFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTTKELA--VENLHVVFDGNKSPQVSD 249

Query: 254 HT 255
           H 
Sbjct: 250 HY 251


>gi|291224336|ref|XP_002732161.1| PREDICTED: TRAF and TNF receptor associated protein-like
           [Saccoglossus kowalevskii]
          Length = 350

 Score = 45.2 bits (105), Expect = 0.010,   Method: Composition-based stats.
 Identities = 41/279 (14%), Positives = 78/279 (27%), Gaps = 49/279 (17%)

Query: 3   VVTVATWNVNS-----IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57
           ++ + TWN++      I  R   + + IK  +PD++ LQE          ET      +I
Sbjct: 102 MLKLLTWNIDGLDNKNITERTKTVCSIIKRESPDVVYLQEV-------IVETFA----YI 150

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
           ET    +Y  +   S+     I+       L         T  +    L +   +     
Sbjct: 151 ETMCSPTYIAIPANSEQYFTTILLRKSRISLLAHKIIEFPTTKMYRNLLTVKARFRDIDL 210

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
            + ++  +   +         +  L+                  D    +I+  D     
Sbjct: 211 LLMTSHMESMKNHSHERKTQLTTVLKH-------------MSEADAATAVIFGGDTNLRD 257

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI--------RIDHIML- 228
                   L +                +S+        +KN  +        R D + L 
Sbjct: 258 YEITQIGGLPDSIGDVWQMCGSPEDAQFSW------DITKNDNLDMPFKPKCRFDRLFLR 311

Query: 229 ----SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
               S     +      +  P G    SDH  ++    I
Sbjct: 312 QGCSSKLLPQMFMFVGTERLPCGR-FASDHWGILCEFKI 349


>gi|269968311|ref|ZP_06182334.1| putative phospholipase C precursor [Vibrio alginolyticus 40B]
 gi|269827084|gb|EEZ81395.1| putative phospholipase C precursor [Vibrio alginolyticus 40B]
          Length = 442

 Score = 45.2 bits (105), Expect = 0.010,   Method: Composition-based stats.
 Identities = 37/281 (13%), Positives = 81/281 (28%), Gaps = 39/281 (13%)

Query: 4   VTVATWNVNSIRARIHNLAA---WIKEN--NPDIICLQETKTE-DKNFPFETLQSLNYHI 57
           + + T+N+ ++ A   ++      I ++    D++ LQE      + F  E  +   Y  
Sbjct: 178 LKLMTYNIWALTAIASHIGDRYELIPQHVKGYDVLALQEVFASGREAFLRELAKEYPYQT 237

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
           +   ++  N             + +         +               I      H  
Sbjct: 238 KMLDKEGVNIHDGGVIIVSRYPIVNEAQYVFPDCSGTDCFADKGVNYAEIIKGGQAYHVF 297

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
              +  +D   +   R         + ++    A    I       Y+     N      
Sbjct: 298 ATHTASFDTDTAREYRQ-------RQFKQIRALAQSLKIPSSETVVYSGDFNVNK----- 345

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYS--FWDYYADSWS-------KNKGIRIDHIML 228
                            + A    +  Y+   +D   ++++       +N    +D++M+
Sbjct: 346 ----RKFPSDYQQMIANLSAIEPHYSGYTESTFDPRINNFAGEALSGGENVEY-LDYVMV 400

Query: 229 SPEA-TSLLHSARID---TKPRGWTKP---SDHTPVIVSLD 262
           S E      +  R+D   T      K    SDH PV  ++ 
Sbjct: 401 SSEYGVKSFNDNRVDVPRTTAESLWKHYNLSDHFPVSATIK 441


>gi|17231714|ref|NP_488262.1| hypothetical protein alr4222 [Nostoc sp. PCC 7120]
 gi|17133357|dbj|BAB75921.1| alr4222 [Nostoc sp. PCC 7120]
          Length = 281

 Score = 45.2 bits (105), Expect = 0.010,   Method: Composition-based stats.
 Identities = 25/265 (9%), Positives = 64/265 (24%), Gaps = 38/265 (14%)

Query: 2   SVVTVATWNV---NSIRARIHNLAAWIKENNPDIICLQETK--TEDKNFPFETLQSLNYH 56
           + + V  WN+   N  +    +    ++   PDII LQE +     +        ++++ 
Sbjct: 45  NSIKVLNWNIAKNNFEKFWFQDFFKILRLYQPDIIFLQEVRMGVNVEQI--MGFTNMSWA 102

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                  +++          +            +  +  E  F     +L          
Sbjct: 103 YAPNFIDAHHQT----YSGILTAAKISAIAKKVIVTKHHEPVFKTPKVSLITEYSLSHQQ 158

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
             + +              +     LEL                       +        
Sbjct: 159 QTLLTINSHLINFVDLDKFKAQLHELELAISTHRGSILFAGDFNTWSRKRAVLLEKTVIR 218

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
           L ++++    +          +                        +D+I      +   
Sbjct: 219 LGLKEAHFTPEENKKIKRFLLSPP----------------------LDYIFY-RGLSEKP 255

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSL 261
            +A++  +       SDH P++   
Sbjct: 256 ATAKVLDEICS----SDHKPLLAEF 276


>gi|90412878|ref|ZP_01220878.1| hypothetical protein P3TCK_26405 [Photobacterium profundum 3TCK]
 gi|90326237|gb|EAS42664.1| hypothetical protein P3TCK_26405 [Photobacterium profundum 3TCK]
          Length = 320

 Score = 45.2 bits (105), Expect = 0.010,   Method: Composition-based stats.
 Identities = 43/293 (14%), Positives = 77/293 (26%), Gaps = 33/293 (11%)

Query: 2   SVVTVATWNVNSI---------------RARIHNLAAWIKENNPDIICLQETKTEDKNFP 46
           + +TVA+WN+  +               RA    LA    + + DI+  QE    D+   
Sbjct: 30  TTLTVASWNLQWLASDPIIIIPPPPQRTRADYQQLAHIATQLDTDILAFQEV--ADRQAI 87

Query: 47  FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
            + L +  Y  E   ++  +        +P                R  +          
Sbjct: 88  EKVLTNDEYVFEFSRRQQESQHNNKRHTKPWPQFVGFAIRKGISYVRNADLHQLDLRGNK 147

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
            +                      +K       Q  +          + ++ Q  D    
Sbjct: 148 SLRYGVDITLLNDGKAALRLLTVHLKSGCYSQQQSTKNRACRQLNRQFEVLEQWVDRRAA 207

Query: 167 IIWENDACFTLE-----VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW-SKNKG 220
                                  +  + G    +     T    S       S   K++ 
Sbjct: 208 EPLPFMILGDFNRRLTLHNDQMWQQLDDGRPTGLSLYAATEGQKSQCRIRIHSKHKKHRK 267

Query: 221 IR-----IDHIMLSPEATSLLHSARI-----DTKPRGWTKPSDHTPVIVSLDI 263
           IR     IDHI+L   A   + +        D +       SDH P+ +SL +
Sbjct: 268 IRHYPNFIDHIVLDERAKQKMVNNSFRELTSDVEVVKAFNLSDHCPITLSLSL 320


>gi|297736947|emb|CBI26148.3| unnamed protein product [Vitis vinifera]
          Length = 408

 Score = 45.2 bits (105), Expect = 0.010,   Method: Composition-based stats.
 Identities = 35/244 (14%), Positives = 68/244 (27%), Gaps = 26/244 (10%)

Query: 21  LAAWIKENNPDIICLQETKTEDKN--FPFETLQS-LNY-HIETCGQKSYNGVAILSKYQP 76
           +   ++E N DI+ LQ+ K E++    P   L   L   ++         G AILSK+  
Sbjct: 137 ILEVLREVNADILALQDVKAEEEKGMKPLSDLAGALGMKYVFAESWAPEFGNAILSKWPI 196

Query: 77  IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
                    D  D +              +      L H +     K  + I        
Sbjct: 197 KRWKAQKIIDGEDFRNVLKATIDVPWAGEVNFHCTQLDHLDENWRMKQTNAIIQSSDCPH 256

Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIR 196
             +  L       ++ +        D              ++V +  +  + +   +   
Sbjct: 257 ILAGGLNSLNGSDYSRER-----WMDIIKYYEEIGKPTPKVDVMEFLKGKEYVDAKNFAG 311

Query: 197 ATHDTHHLYSFWDYYADSWSKN------KGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
                  +         +  +N       G R+D+I+ S ++                  
Sbjct: 312 ECEPVVII---------AKGQNVQGTCKYGTRVDYILASQDSPYKFVPRS--YSVISSKG 360

Query: 251 PSDH 254
            SDH
Sbjct: 361 TSDH 364


>gi|258653500|ref|YP_003202656.1| endonuclease/exonuclease/phosphatase [Nakamurella multipartita
          DSM 44233]
 gi|258556725|gb|ACV79667.1| Endonuclease/exonuclease/phosphatase [Nakamurella multipartita
          DSM 44233]
          Length = 263

 Score = 45.2 bits (105), Expect = 0.010,   Method: Composition-based stats.
 Identities = 10/35 (28%), Positives = 19/35 (54%), Gaps = 1/35 (2%)

Query: 4  VTVATWNVNSIRARIHNLAAWIKENNPDIICLQET 38
          + + + N     A   +L +WI ++  D++CLQE 
Sbjct: 1  MRIVSVNAWGG-ALADDLLSWIADDPADVLCLQEV 34


>gi|241831529|ref|XP_002414867.1| glucose-repressible alcohol dehydrogenase, putative [Ixodes
           scapularis]
 gi|215509079|gb|EEC18532.1| glucose-repressible alcohol dehydrogenase, putative [Ixodes
           scapularis]
          Length = 368

 Score = 45.2 bits (105), Expect = 0.010,   Method: Composition-based stats.
 Identities = 36/264 (13%), Positives = 79/264 (29%), Gaps = 14/264 (5%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY--HIETCGQKSYNGVAILSKY 74
           R   +   +    PD+ICLQE   +   F   +L S+ +              V   +  
Sbjct: 97  RRWRILEEVLSYEPDLICLQEV--DHYKFLRASLGSVGFGGTFFPKPDSPCCYVRGNNGP 154

Query: 75  QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRF 134
               I       +L    + +   FT  +  + +  ++    +          +   +  
Sbjct: 155 DGCAIFYDKAKFELVRCEKRVLEVFTCQSNQVTLLCVFRRKLDDAELCLVTTHLKARQGG 214

Query: 135 LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDA 194
           L  + +  + ++ L F  ++          +      +  +   + Q    L++      
Sbjct: 215 LLSSLRNEQGKDLLDFVQNHRGRRPTIIAGDFNAEPTEPVYKTLLAQRDLSLESSYALQP 274

Query: 195 IRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE---ATSLL---HSARIDTK-PRG 247
                +    Y+ W    D   ++    ID+I  S       + L      +I       
Sbjct: 275 GSGRREQEPPYTTWKIREDGEVRHT---IDYIFFSKADFSLEARLDFPTEDQIGPGRVPS 331

Query: 248 WTKPSDHTPVIVSLDIPEPRKKQQ 271
               SDH  ++  L +P     +Q
Sbjct: 332 LAYASDHFSLVADLALPFRISDEQ 355


>gi|271966389|ref|YP_003340585.1| hypothetical protein Sros_5052 [Streptosporangium roseum DSM 43021]
 gi|270509564|gb|ACZ87842.1| conserved hypothetical protein [Streptosporangium roseum DSM 43021]
          Length = 511

 Score = 45.2 bits (105), Expect = 0.011,   Method: Composition-based stats.
 Identities = 36/296 (12%), Positives = 75/296 (25%), Gaps = 46/296 (15%)

Query: 4   VTVATWN-------VNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56
           +   +WN       V     R   L  ++ + + D++ +QET +       E  ++L + 
Sbjct: 225 LRTMSWNLWHGGSQVKG--GREKQL-KFLLDRDVDVVGMQETSSTSAK---ELAEALGW- 277

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                 ++   + I+S+Y  +          L      I            +   Y P+G
Sbjct: 278 ---DHYQAGADLGIVSRYPIVSRGPLPSESGLAGINAKIRLDDRHEVAVWNVHLGYTPYG 334

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
                         + R       R   E     +GD     +                 
Sbjct: 335 PYDACFGKWGVERLMAREAESKRTRQIQEIMSAMSGDLADASRTPVLLTGDFNAPSHLDW 394

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLY-------------SF---WDYYADSWSKN-- 218
               +          T            Y             ++   +  +   +  +  
Sbjct: 395 TAETRKCGYDSVSWPTSVAPEQSGMKDSYRVAHPDPVADPGITWSPIYTTFTGGYDHDGH 454

Query: 219 KGI-----RIDHIMLSPEATSLLHSARID------TKPRGWTKPSDHTPVIVSLDI 263
           KG      RID +    +       A ++         +     SDH  V+ +  +
Sbjct: 455 KGEPEPQDRIDFVHYKGDLKVKSSDAVVEGTPAPIPNHKDNAWTSDHAAVLTTFAV 510


>gi|167031164|ref|YP_001666395.1| endonuclease/exonuclease/phosphatase [Pseudomonas putida GB-1]
 gi|166857652|gb|ABY96059.1| Endonuclease/exonuclease/phosphatase [Pseudomonas putida GB-1]
          Length = 284

 Score = 45.2 bits (105), Expect = 0.011,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 14/60 (23%)

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           +F  +            +DHI+LSP  T  L    +  +P      SDH PV V + +P+
Sbjct: 228 TFPSWRPQ-------RCLDHILLSPSLT--LERVEVLAQP-----ISDHLPVAVEIRLPD 273


>gi|170724257|ref|YP_001751945.1| endonuclease/exonuclease/phosphatase [Pseudomonas putida W619]
 gi|169762260|gb|ACA75576.1| Endonuclease/exonuclease/phosphatase [Pseudomonas putida W619]
          Length = 284

 Score = 45.2 bits (105), Expect = 0.011,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 14/60 (23%)

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           +F  +            +DHI+LSP  T  L    +  +P      SDH PV V + +P+
Sbjct: 228 TFPSWRPQ-------RCLDHILLSPSLT--LERVEVLAQP-----ISDHLPVAVEIRLPD 273


>gi|77407890|ref|ZP_00784642.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           agalactiae COH1]
 gi|77173535|gb|EAO76652.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           agalactiae COH1]
          Length = 271

 Score = 45.2 bits (105), Expect = 0.011,   Method: Composition-based stats.
 Identities = 41/283 (14%), Positives = 80/283 (28%), Gaps = 38/283 (13%)

Query: 5   TVATWN------VNSIRARIHNLAAW---IKENNPDIICLQETKTEDKNFPFETLQSLNY 55
              T N      VN     +  L      I     DIICLQE              S NY
Sbjct: 3   KCLTLNTHSWMEVN----ALKKLFDLAEHIFREKYDIICLQEV--NQSISSPLATSSPNY 56

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
           H        +     L     +    +L G        +    ++   + + I +L    
Sbjct: 57  HPIEGTPALHQDNFAL----QLVHYLNLQGLHYHWTWAYNHIGYSKYHEGVAILSLKPLK 112

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
            + I  +  DD+  +  R    A   L  +   + +   ++                   
Sbjct: 113 PDDILVSAVDDETDYHTRRALVAETTLNDKVVTVVS--LHLSWFEKGFAEEWKRLETTLL 170

Query: 176 TLEVRQSFQKLQNMGF---------------TDAIRATHDTHHLYSFWDYYADSWSKNKG 220
            +E         N                   D+ +  +     ++            K 
Sbjct: 171 EVETPLLLMGDFNNPTGNQGYELVLNSPLALKDSHQIANHVFGDHTIMADIDGWEGNKKA 230

Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +++DHI  S +    + S+++  +       SDH  + ++L++
Sbjct: 231 LKVDHIFTSEDL--SISSSQVVFEGGEAPVVSDHYGLEITLNL 271


>gi|227485102|ref|ZP_03915418.1| endonuclease/exonuclease/phosphatase family protein [Anaerococcus
           lactolyticus ATCC 51172]
 gi|227236935|gb|EEI86950.1| endonuclease/exonuclease/phosphatase family protein [Anaerococcus
           lactolyticus ATCC 51172]
          Length = 353

 Score = 45.2 bits (105), Expect = 0.011,   Method: Composition-based stats.
 Identities = 38/307 (12%), Positives = 72/307 (23%), Gaps = 51/307 (16%)

Query: 5   TVATWN-------------------VNSIRA-----RIHNLAAWIKENNPDIICLQETKT 40
            + TWN                   VN I        +  ++  IK  NPD++ LQE   
Sbjct: 56  KILTWNIGYGGLDKDTDFFMDGGKMVNPISKDHVENALAGISKEIKTINPDLLFLQEVDA 115

Query: 41  EDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT 100
            D    +  +  + Y  +     S         + P  I      +         E   +
Sbjct: 116 -DSQRTY-HINEVEYFDKELNGASTFAFNYKVGFVPFPIPPMGKVNSGIFTKSKFEIESS 173

Query: 101 INTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP 160
              Q        +   N                                  G      Q 
Sbjct: 174 YRYQQPVPHKWPVRLANLKRGFNASYLPIEGSDKYLVLVNVHLDAYESGSNGRLAQTKQI 233

Query: 161 HDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF-WDYYADSWSKN- 218
                    + +    +    + +  +           + +   Y +  D    ++ +N 
Sbjct: 234 IAFMTEEYNKGN-YLIVGGDFNQELRKGYEANVPEGIWNPSPFPYDYLTDNIKPTFDENT 292

Query: 219 KGIR---------------IDHIMLSPEA-TSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
              R               ID  ++S       +    I          SDH PV++   
Sbjct: 293 NSSRLNHKPYDPNDSYECIIDGFLVSDNVEVKSVKGQAI------GFVNSDHNPVLLEFS 346

Query: 263 IPEPRKK 269
           + E ++ 
Sbjct: 347 LKENKED 353


>gi|147902860|ref|NP_001090474.1| hypothetical protein LOC779387 [Xenopus laevis]
 gi|83405601|gb|AAI10749.1| MGC130968 protein [Xenopus laevis]
          Length = 257

 Score = 45.2 bits (105), Expect = 0.011,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFET-LQSLNYHIET 59
           R+ N+   +++ N DI+CLQE +        +  L+SL YH E 
Sbjct: 71  RLPNILKELEDMNADILCLQEVQENHYQTQIKPSLESLGYHCEY 114


>gi|301309385|ref|ZP_07215327.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 20_3]
 gi|300832474|gb|EFK63102.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 20_3]
          Length = 304

 Score = 45.2 bits (105), Expect = 0.011,   Method: Composition-based stats.
 Identities = 39/283 (13%), Positives = 91/283 (32%), Gaps = 35/283 (12%)

Query: 2   SVVTVATWNV--NSIRARIH--NLAAWIKENNPDIICLQETKTEDKN------FPFETLQ 51
           + V V+++N+  N++  ++     A  I+ +  DI+ +QE    +++       P E  +
Sbjct: 26  ATVKVSSFNIWLNTLGGKLPPSQTAKVIEASQTDIVGIQEGHIYEEDGIKHDHVP-EIAE 84

Query: 52  SLNYHIETCGQKSYN-------GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
           SL +H+   G+  Y                  I++         +    +I         
Sbjct: 85  SLGFHLFNQGEGHYILSRYPVVDSTASRYGVKIQVGKDKFCWMFNCHLYYIPYQPYQLNG 144

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
                  ++           + +   + R+ +   Q ++   P+   GD+N        +
Sbjct: 145 IPYGDYPFIDTEEEAIRFANEARREEVTRYQKDIQQVMKEGYPVFLTGDFNEP--SFLDW 202

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH---HLYSFWDYYADSWSKNKGI 221
                +           + +    +G  D+ R  H        Y++    ++    +   
Sbjct: 203 TQRAADAGIHKIKVEWPATKAFSEIGMNDSYRTIHPDEVSTPGYTWTPVPSEQEILD--- 259

Query: 222 RIDHIMLSPEATSLLHSARI------DTKPRGWTKPSDHTPVI 258
           R+D ++ S      +  + I       +       PSDH  V 
Sbjct: 260 RLDFVLYSG---CKVTDSFITGESETTSDVVVSPYPSDHRMVT 299


>gi|332089000|gb|EGI94112.1| endonuclease/Exonuclease/phosphatase family protein [Shigella
           boydii 5216-82]
          Length = 253

 Score = 45.2 bits (105), Expect = 0.011,   Method: Composition-based stats.
 Identities = 34/267 (12%), Positives = 64/267 (23%), Gaps = 32/267 (11%)

Query: 5   TVATWNVN-SI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN--YH 56
            V T N++        R  +  L   ++  + DI+CLQE            +++     H
Sbjct: 11  KVLTINIHKGFTAFNRRFILPELRDAVRTVSADIVCLQEV-MGAHEVHPLHVENWPDTSH 69

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
            E      ++  A        E               +     +++    R         
Sbjct: 70  YEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVP 129

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
                  +   +    R     +Q   L E +    D   +    D  +     N     
Sbjct: 130 PMTGKAIHVMCVHLGLREAHRQAQLAMLAEWVNELPDGEPVLVEGDFNDWRQKANHPLKV 189

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
                      +                                +R+D I +     +  
Sbjct: 190 QAGLDEIFTRAHGRPARTFPVQFPL-------------------LRLDRIYV----KNAS 226

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263
            SA      R W   SDH P+   + +
Sbjct: 227 ASAPTALPLRTWRHLSDHAPLSAEIHL 253


>gi|312602724|ref|YP_004022569.1| endonuclease/Exonuclease/phosphatase family protein [Burkholderia
          rhizoxinica HKI 454]
 gi|312170038|emb|CBW77050.1| Endonuclease/Exonuclease/phosphatase family protein [Burkholderia
          rhizoxinica HKI 454]
          Length = 273

 Score = 45.2 bits (105), Expect = 0.011,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 10/48 (20%)

Query: 1  MSVV-----TVATWNVNS----IRAR-IHNLAAWIKENNPDIICLQET 38
          M+ +      +AT+N++      R R    +A  + E + DII LQE 
Sbjct: 1  MTTMAYSELRIATYNIHGAGGRWRQRSTQRIAGVVAELDADIIALQEV 48


>gi|293365069|ref|ZP_06611786.1| endonuclease/exonuclease/phosphatase family protein RgfB
           [Streptococcus oralis ATCC 35037]
 gi|307702222|ref|ZP_07639182.1| endonuclease/Exonuclease/phosphatase family protein [Streptococcus
           oralis ATCC 35037]
 gi|291316519|gb|EFE56955.1| endonuclease/exonuclease/phosphatase family protein RgfB
           [Streptococcus oralis ATCC 35037]
 gi|307624235|gb|EFO03212.1| endonuclease/Exonuclease/phosphatase family protein [Streptococcus
           oralis ATCC 35037]
          Length = 271

 Score = 45.2 bits (105), Expect = 0.011,   Method: Composition-based stats.
 Identities = 35/267 (13%), Positives = 80/267 (29%), Gaps = 20/267 (7%)

Query: 4   VTVATWNVNSI--RARIHNLAAWIK---ENNPDIICLQETKTEDKNFPFETLQSLNY--- 55
           +   T N +S   +         ++   E + D+IC QE     +    E   + +Y   
Sbjct: 1   MKFLTLNTHSWMEKEAEEKFQILLQDILEKDYDLICFQEI--NQEMTSPEVEVNNHYQAL 58

Query: 56  ------HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
                 H +   Q     +A   K        +  G D   +   I +   I  + + + 
Sbjct: 59  PSAEPIHQDHYVQLLVEKLAEKGKNYYWTWAYNHIGYDRYHEGVAILSKTPIKAREILVS 118

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG-DYNIIPQPHDCYNPII 168
           ++  P           +     K     +      ++        +  + +  +    + 
Sbjct: 119 DVDDPTDYHTRRVALVETEVEGKELALASVHLSWWDKGFQEEWARFEAVLKELNKPLILA 178

Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
            + +     E  Q+      +G  DA     +    Y+            + +RID++  
Sbjct: 179 GDFNNPAGQEGNQAILASP-LGLQDAFEVAKERSGSYTVPPEIDGWKGNTEPLRIDYVFT 237

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHT 255
           + E    + S ++    +   + SDH 
Sbjct: 238 TKELE--VESLQVVFDGQNSPQVSDHY 262


>gi|94995179|ref|YP_603277.1| Endonuclease/Exonuclease/phosphatase family protein [Streptococcus
           pyogenes MGAS10750]
 gi|94548687|gb|ABF38733.1| Endonuclease/Exonuclease/phosphatase family protein [Streptococcus
           pyogenes MGAS10750]
          Length = 279

 Score = 45.2 bits (105), Expect = 0.011,   Method: Composition-based stats.
 Identities = 37/276 (13%), Positives = 86/276 (31%), Gaps = 20/276 (7%)

Query: 3   VVTVATWNVNSIRAR--IHNLAAW---IKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57
           +  V T N +S      +  L A    I     DIICLQE    ++    E    L  + 
Sbjct: 8   MTKVLTLNTHSWMQANTLKKLVALAEHILAEKYDIICLQEI---NQLIESELATDLPRYQ 64

Query: 58  E-----TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
                 +  +  +  + I    +  +        +      + E    ++ Q + + ++ 
Sbjct: 65  ALSGTPSIHKDHFALLLIHYLQKRGQHYYWSWAYNHIGYDIYQEGVAILSKQPIHVSDIL 124

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLI---FAGDYNIIPQPHDCYNPIIW 169
           +      T+      +             + +        F G++  + +     N  + 
Sbjct: 125 VSAMADETNYHTRRSLIAKTTLDGKEVAVVNVHLSWFDKGFLGEWEKLEKELLTLNCPLL 184

Query: 170 ENDACFTLEVRQSFQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227
                     +  +Q +    +   D+ +        +S            + +++DH+ 
Sbjct: 185 LMGDFNNPTDQDGYQVMMGSPLDLQDSHKVADHVFGDHSIVADIDGWQGNKEALKVDHVF 244

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            S +    + S++I  +       SDH  + V+LD 
Sbjct: 245 TSKDFI--IRSSKITFEGGDAPVVSDHYGLEVTLDW 278


>gi|10140689|gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse transcriptase [Oryza sativa
           Japonica Group]
          Length = 1382

 Score = 45.2 bits (105), Expect = 0.011,   Method: Composition-based stats.
 Identities = 35/261 (13%), Positives = 69/261 (26%), Gaps = 33/261 (12%)

Query: 5   TVATW--NVNSI-RARIHNLAAWI-KENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
            + TW  N   +  A       W+ K   P ++ L ETK  DK                 
Sbjct: 5   KLVTWGRNCRGLGSAATVGELRWLVKSLRPSLVFLSETKMRDKQ---------------A 49

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
               ++     S     E ++                 F  +   + +    LP      
Sbjct: 50  RNLMWSLGFSGSFAVSCEGLSGGLALFWTTAYTVSLRGFNSHFIDVLVSTEELPPWRISF 109

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
                 +      +        +   P +  GD+N +    +                  
Sbjct: 110 VYGEPKRELRHFFWNLLRRLHDQWRGPWLCCGDFNEVLCLDEHLGMRERSEPHMQHFRSC 169

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
                L ++GF             ++ W    D+ + N  +R+D  + + E +       
Sbjct: 170 LDDCGLIDLGFVGP---------KFT-WSNKQDA-NSNSKVRLDRAVANGEFSRYFEDCL 218

Query: 241 IDTKPRGWTKPSDHTPVIVSL 261
           ++         SDH  + + L
Sbjct: 219 VENVITTS---SDHYAISIDL 236


>gi|190344380|gb|EDK36047.2| hypothetical protein PGUG_00145 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 497

 Score = 45.2 bits (105), Expect = 0.011,   Method: Composition-based stats.
 Identities = 41/313 (13%), Positives = 69/313 (22%), Gaps = 70/313 (22%)

Query: 3   VVTVATWNV-NSIRARI-HNLAAWIKENN---PDI---------ICLQET-KTEDKNF-- 45
              + + NV N  R  +     +W+K        I         + LQE  K +  +   
Sbjct: 196 TFRIYSHNVRNGGRDILDPGEESWLKRYRKITASIKFNSQLNTVVALQEVYKFQLDDIMR 255

Query: 46  -------PFE-TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA 97
                  P E   ++         Q       +    +   +       + D     +E 
Sbjct: 256 DLNRYSPPEEPEWEAYGVGRIDGDQLGEFVPILFKTSEWEMVFYDSIWLNEDNPRMALEG 315

Query: 98  TFTINTQTLRIGNLYLPHGNPITSTKYDDKIS-----WIKRFLRFASQRLELEEPLIFAG 152
                 + +    L    GN I                    +         + P    G
Sbjct: 316 WDAKYLRIVSYVTLKHVSGNYINVFNTHLDHMGELSKQGSAQIILDKMNSINQWPSFLCG 375

Query: 153 DYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYA 212
           D N  P             ++                       A +   H  S    + 
Sbjct: 376 DLNTEPNEKAYQIITEQFRNSA------------------KLTTAFNKYGHSKSTVTGFE 417

Query: 213 DSWSKNKGIRIDHIML------------------SPE----ATSLLHSARIDTKPRGWTK 250
                N G  ID+I                    SP         L S  +         
Sbjct: 418 GEVLLNGGQNIDYIFAPSYTAKLGETVLCDKLTTSPPSERYLDLRLKSFGMLHSKFNGLY 477

Query: 251 PSDHTPVIVSLDI 263
            SDH P++    +
Sbjct: 478 MSDHRPIVADFTL 490


>gi|291007593|ref|ZP_06565566.1| hypothetical protein SeryN2_23964 [Saccharopolyspora erythraea NRRL
           2338]
          Length = 295

 Score = 45.2 bits (105), Expect = 0.011,   Method: Composition-based stats.
 Identities = 39/253 (15%), Positives = 70/253 (27%), Gaps = 24/253 (9%)

Query: 16  ARIHNLAAWIKENNPDIICLQE-----TKTEDKNFPFETLQSLNYHIETCGQKSYNGVAI 70
            R   LA  +   +P ++ +QE      K    + P       +Y     G++       
Sbjct: 59  TRRPILAELLNAESPTLLGVQEALYRQVKQVHADIP------AHYDWIGLGREGGGRGEF 112

Query: 71  LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISW 130
           +S Y     V  L  D   +              T+     ++   +  T  ++    + 
Sbjct: 113 MSIYYDTRRVEPLDYDHFWLSDTPNVIGSASWGNTVVRMVTWVRFRDLRTGREFTHVNTH 172

Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG 190
                  + QR         AG    +P            +   + +             
Sbjct: 173 FDHQSENSRQRSAALVRDRIAGFDAGLPVLLTGDFNTRAGDSESYRILTSGGLADGWETA 232

Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
                 A        +F  Y         G RID ++ +      +  A I+   +    
Sbjct: 233 AERLTPAWG------TFGGYEE---PVEGGDRIDWLLANDRV--RVLKAAINPFRKDGWF 281

Query: 251 PSDHTPV--IVSL 261
           PSDH PV  +V L
Sbjct: 282 PSDHLPVHALVEL 294


>gi|260823635|ref|XP_002606186.1| hypothetical protein BRAFLDRAFT_126502 [Branchiostoma floridae]
 gi|229291525|gb|EEN62196.1| hypothetical protein BRAFLDRAFT_126502 [Branchiostoma floridae]
          Length = 560

 Score = 45.2 bits (105), Expect = 0.011,   Method: Composition-based stats.
 Identities = 12/169 (7%), Positives = 30/169 (17%), Gaps = 12/169 (7%)

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           YH                         H                   +         +  
Sbjct: 373 YHHYPWSW------CYTWSNDHGCTRYHHYPWSWCNTRSDDHGCARYHHYPWNRCYTWSH 426

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
           + +      Y       +      ++         +   ++     +  Y    W N   
Sbjct: 427 NYSCNRYYHYPWSWCNTRSDHHGCTRYHHYPWSWCYTWSHHYGCTRYHHYP-WSWCNTRS 485

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF-----WDYYADSWSKN 218
                 +      +   T +       +H Y +     W ++      N
Sbjct: 486 HDHGCTRYHHYPWSRCNTRSHDHGCTRYHNYPWNRCYTWSHHYGCTRNN 534



 Score = 44.8 bits (104), Expect = 0.012,   Method: Composition-based stats.
 Identities = 12/162 (7%), Positives = 29/162 (17%), Gaps = 9/162 (5%)

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           YH                         H                   +         +  
Sbjct: 333 YHHYPWSW------CNTRSDDHGCTRYHHYPWSWCNTRSDDHGCTRYHHYPWSWCYTWSN 386

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
                    Y       +      ++         +   +N     +  + P  W N   
Sbjct: 387 DHGCTRYHHYPWSWCNTRSDDHGCARYHHYPWNRCYTWSHNYSCNRY-YHYPWSWCNTRS 445

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLY--SFWDYYADS 214
                 +      +  +T +       +H Y  S+ +  +  
Sbjct: 446 DHHGCTRYHHYPWSWCYTWSHHYGCTRYHHYPWSWCNTRSHD 487



 Score = 44.8 bits (104), Expect = 0.015,   Method: Composition-based stats.
 Identities = 15/170 (8%), Positives = 30/170 (17%), Gaps = 12/170 (7%)

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           YH                         H    +         +            N    
Sbjct: 393 YHHYPWSW------CNTRSDDHGCARYHHYPWNRCYTWSHNYSCNRYYHYPWSWCNTRSD 446

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
           H        Y     +        ++             ++     +  Y      N   
Sbjct: 447 HHGCTRYHHYPWSWCYTWSHHYGCTRYHHYPWSWCNTRSHDHGCTRYHHYPWSR-CNTRS 505

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF-----WDYYADSWSKNK 219
                 +      N  +T +       ++ Y++     W       SKN 
Sbjct: 506 HDHGCTRYHNYPWNRCYTWSHHYGCTRNNDYTWSWCNTWSDDHGCTSKNY 555


>gi|94989322|ref|YP_597423.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pyogenes MGAS9429]
 gi|94993210|ref|YP_601309.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pyogenes MGAS2096]
 gi|94542830|gb|ABF32879.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pyogenes MGAS9429]
 gi|94546718|gb|ABF36765.1| Endonuclease/Exonuclease/phosphatase family protein [Streptococcus
           pyogenes MGAS2096]
          Length = 279

 Score = 45.2 bits (105), Expect = 0.011,   Method: Composition-based stats.
 Identities = 37/276 (13%), Positives = 85/276 (30%), Gaps = 20/276 (7%)

Query: 3   VVTVATWNVNSIRAR--IHNLAAW---IKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57
           +  V T N +S      +  L A    I     DIICLQE    ++    E    L  + 
Sbjct: 8   MTKVLTLNTHSWMQANTLKKLVALAEHILAEKYDIICLQEI---NQLIESELATDLPRYQ 64

Query: 58  E-----TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
                 +  +  +  + I    +  +        +      + E    ++ Q + + ++ 
Sbjct: 65  ALSGTPSIHKDHFALLLIHYLQKRGQHYYWSWAYNHIGYDIYQEGVAILSKQPIHVSDIL 124

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLI---FAGDYNIIPQPHDCYNPIIW 169
           +      T       +             + +        F G++  + +     N  + 
Sbjct: 125 VSAMADETDYHTRRSLIAKTTLDGKEVAVVNVHLSWFDKGFLGEWEKLEKELLTLNCPLL 184

Query: 170 ENDACFTLEVRQSFQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227
                     +  +Q +    +   D+ +        +S            + +++DH+ 
Sbjct: 185 LMGDFNNPTDQDGYQVMMGSPLNLQDSHKVADHVFGDHSIVADIDGWQGNKEALKVDHVF 244

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            S +    + S++I  +       SDH  + V+LD 
Sbjct: 245 TSKDFI--IRSSKITFEGGDAPVVSDHYGLEVTLDW 278


>gi|116627133|ref|YP_819752.1| hypothetical protein STER_0240 [Streptococcus thermophilus LMD-9]
 gi|116100410|gb|ABJ65556.1| Metal-dependent hydrolase [Streptococcus thermophilus LMD-9]
          Length = 259

 Score = 45.2 bits (105), Expect = 0.011,   Method: Composition-based stats.
 Identities = 25/245 (10%), Positives = 62/245 (25%), Gaps = 15/245 (6%)

Query: 21  LAAWIKENNPDIICLQETKTEDKNFPFETLQ-SLNYHIETCGQKSYNGVAIL-------- 71
           L   I +   DIIC QE    ++      ++    YH+       +              
Sbjct: 12  LKEQILKAQYDIICFQEV---NQEIETAAVETDAYYHVLPSAISIHQDHFFHLLVEKLAE 68

Query: 72  -SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISW 130
                      +  G D   +   + +   +    + + ++  P           +    
Sbjct: 69  EGLQYHWTWAYNHIGYDHLNEGVAVLSRQPLTASEILVSDVDDPTDYHTRRVAVAETTVD 128

Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG 190
            ++    +      ++                    I+  +                 + 
Sbjct: 129 GRKVAVASIHLSWWDKGFQEEWARIEERFQSIGKPLILAGDFNNPAGREGYQTILASPLK 188

Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
             D+ +    T+  Y+            + +RID++  S E    ++   +       + 
Sbjct: 189 LQDSFQVDQKTNGSYTVGPGIDGWKGNEEPLRIDYVFASQEWA--VNRLSVIFDGNNQSL 246

Query: 251 PSDHT 255
            SDH 
Sbjct: 247 VSDHY 251


>gi|56807835|ref|ZP_00365677.1| COG3568: Metal-dependent hydrolase [Streptococcus pyogenes M49 591]
          Length = 260

 Score = 45.2 bits (105), Expect = 0.011,   Method: Composition-based stats.
 Identities = 33/253 (13%), Positives = 79/253 (31%), Gaps = 15/253 (5%)

Query: 21  LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE-----TCGQKSYNGVAILSKYQ 75
           LA  I     DIICLQE    ++    E    L  +       +  +  +  + I    +
Sbjct: 12  LAEHILAEKYDIICLQEI---NQLIESELATDLPRYQALSGTPSIHKDHFALLLIHYLQK 68

Query: 76  PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135
             +        +      + E    ++ Q + + ++ +   +  T       +       
Sbjct: 69  RGQHYYWSWAYNHIGYDIYQEGVAILSKQPIHVSDILVSAMDDETDYHTRRSLIAKTTLD 128

Query: 136 RFASQRLELEEPLI---FAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN--MG 190
                 + +        F G++  + +     N  +           +  +Q +    + 
Sbjct: 129 GKEVAVVNVHLSWFDKGFLGEWEKLEKELLTLNCPLLLMGDFNNPTDQDGYQVMMGSPLD 188

Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
             D+ +        +S            + +++DH+  S +    + S++I  +      
Sbjct: 189 LQDSHKVADHVFGDHSIVADIDGWQDNKEALKVDHVFTSKDFI--IRSSKITFEGGDAPV 246

Query: 251 PSDHTPVIVSLDI 263
            SDH  + V+LD 
Sbjct: 247 VSDHYGLEVTLDW 259


>gi|167836386|ref|ZP_02463269.1| endonuclease/exonuclease/phosphatase family superfamily protein
           [Burkholderia thailandensis MSMB43]
          Length = 128

 Score = 45.2 bits (105), Expect = 0.011,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 17/38 (44%), Gaps = 4/38 (10%)

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           D + ++      +    ID    G  + SDH P+++ L
Sbjct: 92  DFVFVTDTLAHRISRCEID----GAVRASDHQPIVLEL 125


>gi|147798883|emb|CAN65940.1| hypothetical protein VITISV_038402 [Vitis vinifera]
          Length = 2014

 Score = 45.2 bits (105), Expect = 0.012,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 10/45 (22%)

Query: 2    SVVTV--ATWNV-----NSIRARIHNLAAWIKENNPDIICLQETK 39
            S + +   +WNV     NS R  I  +   I+    D+ C+QETK
Sbjct: 1186 SPMKIRLLSWNVRGANDNSKRKVIKAM---IRSQKVDLFCVQETK 1227


>gi|254389420|ref|ZP_05004647.1| hypothetical protein SSCG_01974 [Streptomyces clavuligerus ATCC
           27064]
 gi|294815797|ref|ZP_06774440.1| Endonuclease/exonuclease/phosphatase [Streptomyces clavuligerus
           ATCC 27064]
 gi|326444141|ref|ZP_08218875.1| hypothetical protein SclaA2_23884 [Streptomyces clavuligerus ATCC
           27064]
 gi|197703134|gb|EDY48946.1| hypothetical protein SSCG_01974 [Streptomyces clavuligerus ATCC
           27064]
 gi|294328396|gb|EFG10039.1| Endonuclease/exonuclease/phosphatase [Streptomyces clavuligerus
           ATCC 27064]
          Length = 348

 Score = 45.2 bits (105), Expect = 0.012,   Method: Composition-based stats.
 Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 5/46 (10%)

Query: 221 IRIDHIMLSPEATSLLHSARIDTKPR---GWTKP--SDHTPVIVSL 261
            RID  +L P   + L   R    PR   G  +P  SDH PV V L
Sbjct: 300 RRIDLFLLGPGLAARLARYRAVDHPRLTAGPDRPAASDHRPVTVEL 345


>gi|319956480|ref|YP_004167743.1| endonuclease/exonuclease/phosphatase [Nitratifractor salsuginis DSM
           16511]
 gi|319418884|gb|ADV45994.1| Endonuclease/exonuclease/phosphatase [Nitratifractor salsuginis DSM
           16511]
          Length = 531

 Score = 45.2 bits (105), Expect = 0.012,   Method: Composition-based stats.
 Identities = 44/342 (12%), Positives = 96/342 (28%), Gaps = 74/342 (21%)

Query: 2   SVVTVATWNV--------------------NS-----IRARIHNLAAWIKENNPDIICLQ 36
             + +A+WNV                    +      +R ++ + A  I + + D+I LQ
Sbjct: 20  RTIKIASWNVENLFDMHYQGTEYEEYVPGRHGWSEAMLRKKLEHTAQVICDLDADVIGLQ 79

Query: 37  ET-------KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLD 89
           E        + +             Y   T G+   +  A+LS+    ++          
Sbjct: 80  EIENDEVLSRLQR--LLKRVGCPYPYRAVTGGRAPVH-TALLSRIPLAKVRDLPVTRYGR 136

Query: 90  VQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLI 149
            +           +  + + +     G       Y        + LR    +L      +
Sbjct: 137 QRPILEATLRLDPSLKIFVNHWRSKRGPESERILYA-------KALRKRLMKLPPSTEYL 189

Query: 150 FAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFW- 208
             GD+N   +     +P + +      +    +  +   M     ++        Y+ W 
Sbjct: 190 LLGDFNSDWEEFRIIDPKLNDTGGITGINQVMATTRDGRMVRYRDLKRGQREFLHYNLWL 249

Query: 209 ----DYY-ADSWSKNKGIRIDHIMLSPEATS-----LLHSA----------RIDTKPRGW 248
                   + ++  NK   ID +++ P          +  +           I  +   W
Sbjct: 250 DLPASQRWSHNFYGNKEA-IDAMLIPPSLADGRRWEYVRGSFGVYRPSYLFGIHGEILRW 308

Query: 249 ---------TKPSDHTPVIVSLD-IPEPRKKQQDSTSQNMKP 280
                       SDH P+      +P+   K     ++   P
Sbjct: 309 GYRHGKHTGKGFSDHLPIYARFQTLPDLPVKTSAPEAKKPLP 350


>gi|317031358|ref|XP_001393252.2| reverse transcriptase [Aspergillus niger CBS 513.88]
          Length = 1646

 Score = 45.2 bits (105), Expect = 0.012,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 15/42 (35%), Gaps = 4/42 (9%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
           ID ++ S   T  +    I     G    SDH  +    D P
Sbjct: 632 IDLVLASDNLTDSVIKCAIL----GTEHGSDHCAIETVFDAP 669


>gi|224008636|ref|XP_002293277.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220971403|gb|EED89738.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 1850

 Score = 45.2 bits (105), Expect = 0.012,   Method: Composition-based stats.
 Identities = 32/285 (11%), Positives = 68/285 (23%), Gaps = 40/285 (14%)

Query: 3   VVTVATWNVNSIRARIHNL-----AAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57
           ++ VA  N+N                 I+E   DI+ + E    ++ + ++  Q      
Sbjct: 54  ILRVAINNINGTTFHQKGFEVAHEIQTIQELGIDIMAMCE---SNRAWTYKNKQEYERQT 110

Query: 58  ETCGQKSYNGVAIL-------------------SKYQPIEIVTHLPGDDLDVQARFIEAT 98
                 +    A                     +  +     T   G    ++ R     
Sbjct: 111 HLLWHNTRTVFASCPTGAEGYQPGGNVLNINGPAAGRVKATGTDKWGRFCWMELRGQRDE 170

Query: 99  FTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP 158
             +     R+          +T+              R   ++  L+  L          
Sbjct: 171 GWVIISAYRVCQEESHKPGALTAYMQQYTAMLSAGITRPNPRQQILDNLLHLITSKREQG 230

Query: 159 QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN 218
                      +       + + +                  +   Y+      +S    
Sbjct: 231 FRPILLMDANEDWVTNSHGKNQLADFMAAANLQDAFYERHQQSPPTYT----RGNS---- 282

Query: 219 KGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              R+D+I++ P A   +          G    SDH    V  D+
Sbjct: 283 ---RLDYILVDPVALPCIRRVGYLGTHEGN--FSDHCLEYVDFDM 322


>gi|134077782|emb|CAK45822.1| unnamed protein product [Aspergillus niger]
          Length = 1652

 Score = 45.2 bits (105), Expect = 0.012,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 15/42 (35%), Gaps = 4/42 (9%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
           ID ++ S   T  +    I     G    SDH  +    D P
Sbjct: 605 IDLVLASDNLTDSVIKCAIL----GTEHGSDHCAIETVFDAP 642


>gi|90409692|ref|ZP_01217709.1| hypothetical protein P3TCK_02976 [Photobacterium profundum 3TCK]
 gi|90329045|gb|EAS45302.1| hypothetical protein P3TCK_02976 [Photobacterium profundum 3TCK]
          Length = 292

 Score = 45.2 bits (105), Expect = 0.012,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 60/246 (24%), Gaps = 17/246 (6%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQP 76
           R   + +   + N DI  LQE         +       Y     G+   N          
Sbjct: 54  RKKIVTSIFHDQNIDIAGLQE--PFSDQIMYLARNLPEYSWVGVGRDDGNAKGEAVPIFY 111

Query: 77  IEIVT----HLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIK 132
                                     +      +         G       ++     I 
Sbjct: 112 RSDKYVKLSGGTFWLSKTPELVASIGWDAELTRISTWVRLEEKGTGKRVLVFNSHFDHIG 171

Query: 133 RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192
           +  R  S +L  +      GD N            +             +         T
Sbjct: 172 KVARQESAKLMSDRAKEIIGDGN----DAVIVLGDLNFERTDTVSYHAITNLFNDAREIT 227

Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPS 252
            A     D    Y++  Y  ++ S++    ID+I ++   T  +++       R     S
Sbjct: 228 KAPFKGADNGKAYTYHGY-GNAPSED----IDYIFVNDSLT--VNTFEYKNVIRDGIYSS 280

Query: 253 DHTPVI 258
           DH  VI
Sbjct: 281 DHLSVI 286


>gi|325096241|gb|EGC49551.1| inositol phosphosphingolipids phospholipase C [Ajellomyces
           capsulatus H88]
          Length = 500

 Score = 44.8 bits (104), Expect = 0.012,   Method: Composition-based stats.
 Identities = 50/346 (14%), Positives = 88/346 (25%), Gaps = 66/346 (19%)

Query: 2   SVVTVATWNVNSIRA----RIHNLAAW-----IKENNPDIICLQETKTEDK--NFPFETL 50
           + + V T N   ++     R   L        + EN P I+ LQE  + +   N   ET 
Sbjct: 11  AKINVLTLNCWGLKYISEYRRERLIEIGKRIALSENTPHIVGLQECWSREDYHNIRRETR 70

Query: 51  QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ---TLR 107
           + L Y           G+AILSK+   E   H    +    A F    +         +R
Sbjct: 71  EILPYGKFYFSGIFGGGLAILSKWPIEESTMHAYPLNGRPSAIFRGDWYVGKGVACARIR 130

Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP--------- 158
           IG       +   +  +       +            E   +                  
Sbjct: 131 IGPAAADIVDVFCTHLHAPYEREPRDSYICHRTAQAWEIAKLMKAAAEKGHLVVGLGDFN 190

Query: 159 -----------------QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT 201
                            +    +        A          + + +  F  +       
Sbjct: 191 MLPQSFAHRLITSHAPVKDVWGHLHPDSSIGAAIDSAEMSRKKPVPSADFNISENGATCD 250

Query: 202 HHLYSF-WDYYADSWSKNKG-------------IRIDHIMLSPEATSLLHS--------- 238
             L ++ W        K +G              R+D+I +   + S   S         
Sbjct: 251 SILNTWRWSKSQQKRLKREGPMPVDGQRPDPLAKRLDYIFVGDGSFSNFSSLRKWDIESA 310

Query: 239 --ARIDTKPRGWTKPSDHTPVIVSLDIP-EPRKKQQDSTSQNMKPI 281
               ++  P      SDH  V  ++ +         D    +  PI
Sbjct: 311 RVCMLERHPHLHCSLSDHFGVEATIKLDIAKEADDGDEGPSSFLPI 356


>gi|296133066|ref|YP_003640313.1| Endonuclease/exonuclease/phosphatase [Thermincola sp. JR]
 gi|296031644|gb|ADG82412.1| Endonuclease/exonuclease/phosphatase [Thermincola potens JR]
          Length = 224

 Score = 44.8 bits (104), Expect = 0.012,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 7/42 (16%)

Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           RID+I++S           I++        SDH PV+ +L++
Sbjct: 190 RIDYILVSENIVDYSLEV-INSD------ASDHLPVLATLEV 224


>gi|240278178|gb|EER41685.1| inositol phosphosphingolipids phospholipase C [Ajellomyces
           capsulatus H143]
          Length = 500

 Score = 44.8 bits (104), Expect = 0.012,   Method: Composition-based stats.
 Identities = 50/346 (14%), Positives = 88/346 (25%), Gaps = 66/346 (19%)

Query: 2   SVVTVATWNVNSIRA----RIHNLAAW-----IKENNPDIICLQETKTEDK--NFPFETL 50
           + + V T N   ++     R   L        + EN P I+ LQE  + +   N   ET 
Sbjct: 11  AKINVLTLNCWGLKYISEYRRERLIEIGKRIALSENTPHIVGLQECWSREDYHNIRRETR 70

Query: 51  QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ---TLR 107
           + L Y           G+AILSK+   E   H    +    A F    +         +R
Sbjct: 71  EILPYGKFYFSGIFGGGLAILSKWPIEESTMHAYPLNGRPSAIFRGDWYVGKGVACARIR 130

Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP--------- 158
           IG       +   +  +       +            E   +                  
Sbjct: 131 IGPAAADIVDVFCTHLHAPYEREPRDSYICHRTAQAWEIAKLMKAAAEKGHLVVGLGDFN 190

Query: 159 -----------------QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT 201
                            +    +        A          + + +  F  +       
Sbjct: 191 MLPQSFAHRLITSHAPVKDVWGHLHPDSSIGAAIDSAEMSRKKPVPSADFNISENGATCD 250

Query: 202 HHLYSF-WDYYADSWSKNKG-------------IRIDHIMLSPEATSLLHS--------- 238
             L ++ W        K +G              R+D+I +   + S   S         
Sbjct: 251 SILNTWRWSKSQQKRLKREGPMPVDGQRPDPLAKRLDYIFVGDGSFSNFSSLRKWDIESA 310

Query: 239 --ARIDTKPRGWTKPSDHTPVIVSLDIP-EPRKKQQDSTSQNMKPI 281
               ++  P      SDH  V  ++ +         D    +  PI
Sbjct: 311 RVCMLERHPHLHCSLSDHFGVEATIKLDIAKEADDGDEGPSSFLPI 356


>gi|254490888|ref|ZP_05104071.1| endonuclease/exonuclease/phosphatase family [Methylophaga
           thiooxidans DMS010]
 gi|224464060|gb|EEF80326.1| endonuclease/exonuclease/phosphatase family [Methylophaga
           thiooxydans DMS010]
          Length = 228

 Score = 44.8 bits (104), Expect = 0.012,   Method: Composition-based stats.
 Identities = 34/267 (12%), Positives = 74/267 (27%), Gaps = 52/267 (19%)

Query: 4   VTVATWNVNSIRARIH--------NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55
           + +A++N++   A I          +AA I E   D+I LQE                  
Sbjct: 3   LKLASYNIH---ACIGTDGQFDPFRIAAVINELGADVIALQEV----------------- 42

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
             E       + +  L++   +  +               E+    N    R+       
Sbjct: 43  --EHHLVNDIDLLDFLAQQTGMIALAG--------PTMLRESRHYGNAILTRLTPESHQL 92

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
            +          +  +   +      +      +   +     Q           +    
Sbjct: 93  LDLSLEDNEPRGVIQLSLNIDDHRLLVYATHLGLKPVERRFQVQKILSLFETKTADTTVL 152

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLY-SFWDYYADSWSKNKGIRIDHIMLSPEATS 234
             ++ + F   + + +  A        + + SFW ++A          +D + ++P    
Sbjct: 153 MGDLNEWFLWGRPLRWLKAYFDITPAINSFPSFWPFFA----------LDRVWVTPR--H 200

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261
            L +           K SDH PV   +
Sbjct: 201 HLLNVSAHKTALA-KKASDHLPVTADI 226


>gi|222618572|gb|EEE54704.1| hypothetical protein OsJ_02025 [Oryza sativa Japonica Group]
          Length = 470

 Score = 44.8 bits (104), Expect = 0.012,   Method: Composition-based stats.
 Identities = 23/135 (17%), Positives = 50/135 (37%), Gaps = 12/135 (8%)

Query: 132 KRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ----KLQ 187
            R      +    +  L++     I P  +  +  +   N+  ++ E   + +    ++ 
Sbjct: 309 WRCTFVYGEPKTTDRHLMWELIRRIKPVSNALWLMMGDFNETLWSFEQFSARRRPEKQMM 368

Query: 188 NMGFTDAIRATHDTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLLHSARIDT--K 244
           +     +    HD   L   W Y       +N  +R+D  + SP  ++    A++     
Sbjct: 369 DFREVLSHCDLHDIGFLGRPWTYDNGQRGDRNVKVRLDRAVASPSWSNHFSEAKLLHLVS 428

Query: 245 PRGWTKPSDHTPVIV 259
           PR     SDH P+++
Sbjct: 429 PR-----SDHCPILL 438


>gi|91227580|ref|ZP_01261884.1| putative phospholipase C precursor [Vibrio alginolyticus 12G01]
 gi|91188473|gb|EAS74766.1| putative phospholipase C precursor [Vibrio alginolyticus 12G01]
          Length = 442

 Score = 44.8 bits (104), Expect = 0.012,   Method: Composition-based stats.
 Identities = 37/281 (13%), Positives = 82/281 (29%), Gaps = 39/281 (13%)

Query: 4   VTVATWNVNSIRARIHNLAA---WIKEN--NPDIICLQETKTE-DKNFPFETLQSLNYHI 57
           + + T+N+ ++ A   ++      I ++    D++ LQE      + F  E  +   Y  
Sbjct: 178 LKLMTYNIWALTAIASHIGDRYELIPQHVKGYDVLALQEVFASGREAFLRELAKEYPYQT 237

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
           +   ++  N             + +         +               I      H  
Sbjct: 238 KMLDKEGVNIHDGGVIIVSRYPIVNEAQYVFPDCSGTDCFADKGVNYAEIIKGGQAYHVF 297

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
              +  +D   +   R         + ++    A   +I       Y+     N      
Sbjct: 298 ATHTASFDTDTAREYRQ-------RQFKQIRTLAQSLDIPSSETVVYSGDFNVNK----- 345

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYS--FWDYYADSWS-------KNKGIRIDHIML 228
                            + A    +  Y+   +D   ++++       +N    +D++M+
Sbjct: 346 ----RKFPGDYQQMIANLSAIEPHYSGYTESTFDPRINNFAGEALSGGENVEY-LDYVMV 400

Query: 229 SPEA-TSLLHSARID---TKPRGWTKP---SDHTPVIVSLD 262
           S E      +  R+D   T      K    SDH PV  ++ 
Sbjct: 401 SSEYGVKSFNDNRVDVPRTTAESLWKHYNLSDHFPVSATIK 441


>gi|226371904|gb|ACO51577.1| Retrovirus-related Pol polyprotein LINE-1 [Rana catesbeiana]
          Length = 156

 Score = 44.8 bits (104), Expect = 0.012,   Method: Composition-based stats.
 Identities = 22/122 (18%), Positives = 41/122 (33%), Gaps = 4/122 (3%)

Query: 3   VVTVATWNVNSIRARIH--NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           ++   + NV  +        + + + ++    I LQET       P   L +  Y     
Sbjct: 12  MLRCISLNVKGLNLPEKRSQVLSSLSKHKAHFIFLQETHFRSDAIPK--LSNHIYRSAFH 69

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
                     +S         HL    +D   RFI    T   + + + N+Y P+ + +T
Sbjct: 70  ATNPDAKRKGISILISKHANFHLSDSLIDPAGRFIFLKGTYAAKPITLANIYCPNEHQVT 129

Query: 121 ST 122
             
Sbjct: 130 FF 131


>gi|111658349|ref|ZP_01409037.1| hypothetical protein SpneT_02000489 [Streptococcus pneumoniae
           TIGR4]
          Length = 260

 Score = 44.8 bits (104), Expect = 0.012,   Method: Composition-based stats.
 Identities = 28/250 (11%), Positives = 68/250 (27%), Gaps = 9/250 (3%)

Query: 21  LAAWIKENNPDIICLQETK-------TEDKNFPFETLQSLNYHIETCGQKSYNGVAILSK 73
           L   I E + D+IC QE          E  +       +   H +   +     ++   K
Sbjct: 12  LLEDILEKDYDLICFQEINQEMTSSEVEVNDLYQALPAAEPIHQDHYVRLLVEKLSEQGK 71

Query: 74  YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKR 133
                   +  G +   +   I +   I  + + + ++  P           + +   K 
Sbjct: 72  NYYWTWAYNHIGYNRYHEGVAILSKTPIEAREILVSDVDDPTDYHTRRVALAETVVDGKE 131

Query: 134 FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTD 193
               +      ++                    ++  +      +          +G  D
Sbjct: 132 LAVASVHLSWWDKGFQEEWARFEAVLKKLNKPLLLAGDFNNPAGQEGYQAILASPLGLQD 191

Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253
           A     +    Y+            + +RID++  + E    + +  +        + SD
Sbjct: 192 AFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTTKELA--VENLHVVFDGNKSPQVSD 249

Query: 254 HTPVIVSLDI 263
           H  +   L+ 
Sbjct: 250 HYGLNAILNW 259


>gi|289829521|ref|ZP_06547123.1| hypothetical protein Salmonellentericaenterica_23358 [Salmonella
          enterica subsp. enterica serovar Typhi str. E98-3139]
          Length = 28

 Score = 44.8 bits (104), Expect = 0.013,   Method: Composition-based stats.
 Identities = 8/24 (33%), Positives = 16/24 (66%)

Query: 4  VTVATWNVNSIRARIHNLAAWIKE 27
          +   ++N+N +RAR H L A +++
Sbjct: 1  MKFVSFNINGLRARPHQLEAIVEK 24


>gi|218515316|ref|ZP_03512156.1| putative metal-dependent hydrolase protein [Rhizobium etli 8C-3]
          Length = 65

 Score = 44.8 bits (104), Expect = 0.013,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 19/41 (46%), Gaps = 3/41 (7%)

Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           +R+DHI ++ +    +  A +    R     SDH P+   +
Sbjct: 25  MRLDHIFVTDDLV--VKRAAVLQN-RLTNVASDHLPLFAEI 62


>gi|86360979|ref|YP_472866.1| putative metal-dependent hydrolase protein [Rhizobium etli CFN 42]
 gi|86285081|gb|ABC94139.1| putative metal-dependent hydrolase protein [Rhizobium etli CFN 42]
          Length = 242

 Score = 44.8 bits (104), Expect = 0.013,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 20/41 (48%), Gaps = 3/41 (7%)

Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           +R+DHI ++      +  A +  + R     SDH P++  +
Sbjct: 202 MRLDHIFVTEGLV--VQRATVL-QTRLTRVASDHLPLLAEI 239


>gi|116201803|ref|XP_001226713.1| hypothetical protein CHGG_08786 [Chaetomium globosum CBS 148.51]
 gi|88177304|gb|EAQ84772.1| hypothetical protein CHGG_08786 [Chaetomium globosum CBS 148.51]
          Length = 1577

 Score = 44.8 bits (104), Expect = 0.013,   Method: Composition-based stats.
 Identities = 42/273 (15%), Positives = 70/273 (25%), Gaps = 47/273 (17%)

Query: 9   WNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGV 68
           WN          L A ++E   D++ +QE                         +     
Sbjct: 444 WNTEG---NKQALEALLEEAQYDLMAIQE---------------------PWINQQTKST 479

Query: 69  AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKI 128
                 +   +        + V  +F    +   T        +   GN           
Sbjct: 480 YCPRGSKYHLVHKASGRAAIFVSRKFDTGQWEYETSEEHCKVWFPGLGNSGLELWSIYNP 539

Query: 129 SWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN 188
              K  L+    R     P++ AGD+N+     D +     + +A   L ++        
Sbjct: 540 LEDKTLLQTLLSRPAPAYPVVLAGDFNLHHPHWDRFGRYERKAEALLELALQWDLDLRTP 599

Query: 189 MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGW 248
            G               +                IDH   S        +     + RG 
Sbjct: 600 AGTITRAPQGAQRGRTST----------------IDHFWASVGL----QTTYYGLEYRGK 639

Query: 249 TKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
              SDH P I+  DI  P  +Q      N K +
Sbjct: 640 ---SDHYPQILEADIGGPLPQQTQPGGWNWKMM 669


>gi|324114357|gb|EGC08326.1| endonuclease/Exonuclease/phosphatase [Escherichia fergusonii B253]
          Length = 253

 Score = 44.8 bits (104), Expect = 0.013,   Method: Composition-based stats.
 Identities = 34/267 (12%), Positives = 64/267 (23%), Gaps = 32/267 (11%)

Query: 5   TVATWNVN-SI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN--YH 56
            V T N++        R  +  L   ++  + DI+CLQE            +++     H
Sbjct: 11  KVLTINIHKGFTAFNRRFILPELRDAVRTVSADIVCLQEV-MGAHEVHPLHVENWPDTSH 69

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
            E      ++  A        E               +     +++    R         
Sbjct: 70  YEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVP 129

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
                  +   +    R     +Q   L E +    D   +    D  +     N     
Sbjct: 130 PMTGKAIHVMCVHLGLREAHRQAQLAMLAEWVNELPDGEPVLVAGDFNDWRQKANHPLKM 189

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
                      +                                +R+D I +     +  
Sbjct: 190 QAGLDEIFTHAHGRPARTFPVQFPL-------------------LRLDRIYV----KNAS 226

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263
            SA      R W   SDH P+   + +
Sbjct: 227 ASAPTALPLRTWRHLSDHAPLSAEIHL 253


>gi|242023120|ref|XP_002431984.1| protein angel, putative [Pediculus humanus corporis]
 gi|212517335|gb|EEB19246.1| protein angel, putative [Pediculus humanus corporis]
          Length = 354

 Score = 44.8 bits (104), Expect = 0.013,   Method: Composition-based stats.
 Identities = 41/297 (13%), Positives = 85/297 (28%), Gaps = 43/297 (14%)

Query: 2   SVVTVATWNV----------NSIRA-------RIHNL--AAWIKENNPDIICLQETKTED 42
           S + +  WN+          N ++         +        I +N+PD+ICL+E   + 
Sbjct: 68  SFLRLLQWNILSQTLGVSNDNFVKTPPESLDWSLKRFYVLQEIIQNDPDVICLEEV--DH 125

Query: 43  KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA--TFT 100
             F    L+S+ Y  +   +         S    +E      G  +  +    E     T
Sbjct: 126 FKFLESALKSIGYSGKFFPKPD-------SPCVYVEGNNGSDGAAMFYKTSKYEVIKWET 178

Query: 101 INTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP 160
              +   + +  +   + +   +   +       L+  +  L          D     + 
Sbjct: 179 RILEVWHVQSNQVGLSSILKDKESGIEFCVAVTHLKAKAGALLATLRDHQGRDLLTWLEK 238

Query: 161 HDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG 220
                PII   D               N     +  + +     Y+ W         +  
Sbjct: 239 ISGGRPIIIGGDFNAEPSEPVYRTMTDNRLDLKSAYSVNGREPPYTTW----KGEICHT- 293

Query: 221 IRIDHIMLSPEATS-LLHSA----RIDTK-PRGWTKPSDHTPVIVSLDIPEPRKKQQ 271
             ID++  S       L        I  +     + PSDH  ++V  ++     + +
Sbjct: 294 --IDYVFHSKHFIPLRLLDFPTGKTIGPERIPSLSYPSDHFSLVVDFELNNVVAEDE 348


>gi|297161073|gb|ADI10785.1| endonuclease/exonuclease/phosphatase [Streptomyces bingchenggensis
           BCW-1]
          Length = 271

 Score = 44.8 bits (104), Expect = 0.013,   Method: Composition-based stats.
 Identities = 44/263 (16%), Positives = 84/263 (31%), Gaps = 24/263 (9%)

Query: 5   TVATWNVNSIRA-RIHNLAAWIK-ENNPDIICLQETKTEDK-NFPFETLQSLNYHIE--- 58
            + T+N     A R    A W+  +   D++ + E  +          L    Y      
Sbjct: 24  RLITFNAQHASAERSRRQAEWLAGQEAADLVVMTEVGSGPGGQALVTALAQRGYRSVLAL 83

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
             G+  Y  V      +   + + +             A   I + T+ +  LY+P   P
Sbjct: 84  PSGRPDYRTVLASRSAELEAVDSGIGVLSHRGP----AARVRIGSHTVGLLGLYVPSRGP 139

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
                 D +               + + P+I +GD N++        P    + A F   
Sbjct: 140 KERRNEDKRAFQGAVTDAVPGLLAQFDGPVIVSGDLNVV-------EPGHVPHHAVFGKW 192

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
               ++   + G  DA R  H     +S++           G R DH  ++      + +
Sbjct: 193 EYSFYRSFVDAGLIDAFRHLHPDAAEHSWFG-RGGD-----GYRFDHAFVTARHGEYVRT 246

Query: 239 ARIDTKPRGWTKPSDHTPVIVSL 261
            +   +PR     +DH  + + L
Sbjct: 247 CQYLHEPREL-GLTDHAAMFLRL 268


>gi|159899198|ref|YP_001545445.1| endonuclease/exonuclease/phosphatase [Herpetosiphon aurantiacus
           ATCC 23779]
 gi|159892237|gb|ABX05317.1| Endonuclease/exonuclease/phosphatase [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 304

 Score = 44.8 bits (104), Expect = 0.013,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 73/254 (28%), Gaps = 44/254 (17%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + + +WNV        ++   I +  PD+I LQE            L S   ++E     
Sbjct: 83  LRLLSWNVAGWNLNSVDILRVIDDEQPDLIALQEVDVGLGKPLQTALASKYPYVEFRPAS 142

Query: 64  ---SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
                  +A+ SK+    I             R       +    + I +  +       
Sbjct: 143 GAAQPADLALWSKWPFALIHPCAYWQCYRRAYRVQHPQQPLILVNVHIEHSPIR------ 196

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
                ++        +  +   +  EP++ AGD+N + Q            D+       
Sbjct: 197 -WLRFEREREEAAIGQMIADFGQTTEPVLLAGDFNTVEQQAGYAALNTVWGDS------- 248

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
              ++   MGF+   R+ H                      RID+I  +     +     
Sbjct: 249 -WHERGVGMGFSWPQRSWHPPIV------------------RIDYIWHNAAIRPI----- 284

Query: 241 IDTKPRGWTKPSDH 254
              +       SDH
Sbjct: 285 ---QLETGAGVSDH 295


>gi|197265396|ref|ZP_03165470.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|197243651|gb|EDY26271.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
          Length = 252

 Score = 44.8 bits (104), Expect = 0.013,   Method: Composition-based stats.
 Identities = 28/251 (11%), Positives = 58/251 (23%), Gaps = 27/251 (10%)

Query: 15  RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN--YHIETCGQKSYNGVAILS 72
           R  +  L   ++    DI+CLQE            +++     H E      ++  A   
Sbjct: 27  RFILPELRDAVRTVGADIVCLQEV-MGAHEVHPLHIENWPDTTHYEFLADTMWSDFAYGR 85

Query: 73  KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIK 132
                E               +     ++     R           IT    +  I  + 
Sbjct: 86  NAVYPEGHHGNAVLSRYPIEHYENRDVSVGGSEKRGVLYC-----RITPPMLNRPIHVMC 140

Query: 133 RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192
             L       + +  ++      +             +        +  +  +       
Sbjct: 141 VHLGLRESHRQAQLTMLAGWVNALPESEPVLVAGDFNDWRQKAGPPLNAAGLEEIFTRAH 200

Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPS 252
                T                      +R+D I +     S   +       R W   S
Sbjct: 201 GRPARTFPVSMPL---------------LRLDRIYVKNANASSPTA----LPLRNWRHLS 241

Query: 253 DHTPVIVSLDI 263
           DH P+   + +
Sbjct: 242 DHAPLSAEIHL 252


>gi|115918004|ref|XP_001190384.1| PREDICTED: similar to endonuclease/reverse transcriptase
           [Strongylocentrotus purpuratus]
 gi|115929974|ref|XP_001194002.1| PREDICTED: similar to endonuclease/reverse transcriptase
           [Strongylocentrotus purpuratus]
          Length = 1154

 Score = 44.8 bits (104), Expect = 0.013,   Method: Composition-based stats.
 Identities = 38/262 (14%), Positives = 74/262 (28%), Gaps = 35/262 (13%)

Query: 2   SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
             + +   N  S+++        A I++ +PDIIC  ET    + F  E      Y+I  
Sbjct: 71  RTLKLLNVNCRSLKSLKKQRDFQALIEQEDPDIICGTETHLNGEYFTSEVFPQ-TYNIFR 129

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +  + G   +   + +                      +I  + +  GN  L  G+  
Sbjct: 130 KDRNEHGGGVFIGLRKDL---------LGMEMDNLDTDCESIWAKIIFAGNRILYIGSFY 180

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                D                      +I  GD+N      +  N  +  + A    + 
Sbjct: 181 RPPNDDPTSLMNLNDALKKLTEKATLPNIILCGDFNAPH--INWENNTVIIDAAQNKPQY 238

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
            +   +       D + +                +  KN    +D    +    + +  +
Sbjct: 239 GRRLNETLLDMTHDNMLSQMQCD----------ATREKNI---LDLTFTT--IPNQITKS 283

Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261
            I          SDH  V + L
Sbjct: 284 EIVP------GMSDHKAVSIHL 299


>gi|291515515|emb|CBK64725.1| Metal-dependent hydrolase [Alistipes shahii WAL 8301]
          Length = 290

 Score = 44.8 bits (104), Expect = 0.013,   Method: Composition-based stats.
 Identities = 30/274 (10%), Positives = 73/274 (26%), Gaps = 44/274 (16%)

Query: 5   TVATWNVNSI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
            + T+NV  I     +     +A  +KE + D IC+ E                      
Sbjct: 51  RLVTYNV-GIFNKYIKDDYQLIADMMKEIDADAICMNEL--------------------- 88

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
                 N          ++    L G         +        + +      +   +  
Sbjct: 89  -----DNNTNRTRHVYQLKHFASLMGSWDFEYGAAMPYDGGEYGEGVTTRKKAVNKFSVA 143

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                  +   +   +      +        + +  +               D+   + +
Sbjct: 144 LPKGVGAEPRVLV-VMEMEDYVICTSHLDHVSSEAQLGQVELITKTMKERYGDSGKPVFL 202

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM---LSPEATSLL 236
                   +      ++   +   + + +  +      N    ID+IM    +P+    +
Sbjct: 203 GGDMNATPSSETGKLLQKDWEILTI-TGFGTFPSD---NPSKCIDYIMQLKGTPKCE--V 256

Query: 237 HSARIDTKPRGWT--KPSDHTPVIVSLDIPEPRK 268
             ++I    +     K SDH PV++ + +P   K
Sbjct: 257 VGSQILRWFKSGDVTKASDHLPVMLDIKLPAKNK 290


>gi|265753182|ref|ZP_06088751.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
 gi|263236368|gb|EEZ21863.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
          Length = 281

 Score = 44.8 bits (104), Expect = 0.013,   Method: Composition-based stats.
 Identities = 39/268 (14%), Positives = 81/268 (30%), Gaps = 27/268 (10%)

Query: 7   ATWNV------NSIRA---RIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYH 56
           AT+NV      +S+     R   +  +IK+   DI+ +QE    + ++      +     
Sbjct: 28  ATFNVRYDNPQDSLNNWQYRKDRVCQFIKDRELDIVGMQEVLHNQFQDLRAGLPEYDGIG 87

Query: 57  IETCGQKSYNGVA-ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
           +     K+    A +  +    E++        +         +      +     +   
Sbjct: 88  VGRDDGKTAGEYAPLFYRKDKYEVLDSNTFWLAENPDSVGMMGWDAVCVRIATWAKFKDK 147

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
                    +     +    R  S  L + +     G+                  DA  
Sbjct: 148 ATGKIFMAVNTHFDHVGEEARRQSALLIIRKIKEIVGER------PAVVTGDFNVTDASD 201

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDY-YADSWSKNKGIRIDHIMLSPEATS 234
             E   + + +    +  A R    T   Y+F D+    +    K   ID I ++P+   
Sbjct: 202 AYETITTNEFVMKDAYKTAARV---TGVDYTFHDFARIPAEDCEK---IDFIFVTPQVL- 254

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLD 262
            + +  I  +       SDH P +  L+
Sbjct: 255 -VRNCEIPAEV-PEALLSDHNPQLADLE 280


>gi|30248098|ref|NP_840168.1| hypothetical protein NE0067 [Nitrosomonas europaea ATCC 19718]
 gi|30179983|emb|CAD83978.1| conserved hypothetical protein [Nitrosomonas europaea ATCC 19718]
          Length = 274

 Score = 44.8 bits (104), Expect = 0.013,   Method: Composition-based stats.
 Identities = 33/260 (12%), Positives = 66/260 (25%), Gaps = 27/260 (10%)

Query: 2   SVVTVATWNVN-SI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55
             + +AT+N++  +     R  +H L   +   + D++ LQE    +        +    
Sbjct: 27  RTLHIATYNIHKGLSFFNQRLILHELRDQLHGLDVDVVFLQEV-VGEHALHATRFRDWPR 85

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
           + +                  +    H     L   +        I+        L    
Sbjct: 86  NTQYEFLADSMWPDFAYGKNAVYGHGHHGNAILSRFSIVNWENEDISAHRFESRGLLHCE 145

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
                       I       R    +             +         +   W   A  
Sbjct: 146 LAIPGWKDTLHCICVHLGLFRRGRSQQLEAIEKRIRQLVSPDAPLVVAGDFNDWRGAANP 205

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            L  R +  ++       A R+      L                +R+D I +       
Sbjct: 206 LLASRLNLVEVFQHTHGKAARSFPSVLPL----------------LRLDRIYIRGF---Q 246

Query: 236 LHSARIDTKPRGWTKPSDHT 255
           + +A+I    R W++ SDH 
Sbjct: 247 VKNAQILHN-RPWSRISDHA 265


>gi|291513563|emb|CBK62773.1| Metal-dependent hydrolase [Alistipes shahii WAL 8301]
          Length = 406

 Score = 44.8 bits (104), Expect = 0.013,   Method: Composition-based stats.
 Identities = 44/266 (16%), Positives = 73/266 (27%), Gaps = 27/266 (10%)

Query: 17  RIHNLAAWIKEN--NPDIICLQE--TKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILS 72
           R  ++   I+++  +PDI+ +QE     +  +     L  L  + E     S  G+    
Sbjct: 144 RKSHVGDIIRQSGNDPDILGVQECSIAAQKADM-KAMLGDLYDYSENEKPTSSPGLIFWK 202

Query: 73  KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIK 132
           K             DL                 +R+ +L       + S           
Sbjct: 203 KGAFELEER--EIVDLLNGKYPNTYEKQRYGHFVRLKHLASGSSILVYSVHLRAGSDVAT 260

Query: 133 RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192
             LR              + +           N              +          FT
Sbjct: 261 ADLRKEMIDNLCPLAARKSAETGCPVIVLGDMNCTPNRLIGGIPSSPQVYKSHGFLDTFT 320

Query: 193 DAIRATHDTHHLYSFWDYYADSWS------KNKGIRIDHIMLSPEATSLLHS---ARIDT 243
              + T++ +  YS     A          +N   RID+I   PE  S + +   A +  
Sbjct: 321 QTRQRTNENYATYS--SSAAVVEECRVEVGENGSRRIDYIFTYPE--SRVTTTRYATVLN 376

Query: 244 KPRGWTK-------PSDHTPVIVSLD 262
                T        PSDH PV   L+
Sbjct: 377 FAEDGTANKLRSPLPSDHHPVRAELN 402


>gi|227357889|ref|ZP_03842237.1| conserved hypothetical protein [Proteus mirabilis ATCC 29906]
 gi|227161999|gb|EEI47017.1| conserved hypothetical protein [Proteus mirabilis ATCC 29906]
          Length = 306

 Score = 44.8 bits (104), Expect = 0.013,   Method: Composition-based stats.
 Identities = 41/281 (14%), Positives = 84/281 (29%), Gaps = 31/281 (11%)

Query: 2   SVVTVATWNVNS---IRARIHNLAAWIKENNPDIICLQET----------KTED------ 42
           + + VAT+N++     RA     +  ++  N D++ LQE           K+ D      
Sbjct: 33  NTLVVATYNIDGKVYGRAAEQ--SRLLENLNVDLVGLQEVNHHNRRFKQLKSYDALEYFN 90

Query: 43  -KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI 101
            + F  +    ++         +      +S  + I +V+       D   +        
Sbjct: 91  KEYFKHQFFGEMSIFAHGGWGIALLSRYKISNTKNIHLVSDETSVYKDEVNQIFANYDPN 150

Query: 102 NTQTLR-IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP 160
           N +++R   +LY P G                      +  + +  P   +         
Sbjct: 151 NAESVRAFDSLYEPDGPMHNGAVAPKSYIHAVVNKNGMNIDVYVAHPSFESMALRQQQFK 210

Query: 161 HDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG 220
               +           L    + Q    +    A          Y + + + D     K 
Sbjct: 211 TILEDMDNCNGKYKILLADTNADQDTHELDIFRA-NYRLANGGEYGWIETFHDKDPMMKV 269

Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           + ID+I++S           I       +  SDH P++ +L
Sbjct: 270 LSIDNIIVSKNI-------EISDVKAIQSTLSDHYPLVATL 303


>gi|159185011|ref|NP_354980.2| hypothetical protein Atu2011 [Agrobacterium tumefaciens str. C58]
 gi|159140285|gb|AAK87765.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
          Length = 319

 Score = 44.8 bits (104), Expect = 0.013,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 34/79 (43%), Gaps = 22/79 (27%)

Query: 207 FWDYYADSWSKNKGIRIDHIMLSPEATSL--------LHSA-----------RIDTKPR- 246
           +  Y++    +    ++D++ LSP             + +             ++  PR 
Sbjct: 240 WTLYHSRGPQEQHLCQLDYVWLSPRLAETSATHVPEIIRNGQPFRTVFPPGQEVERYPRT 299

Query: 247 GWTKP--SDHTPVIVSLDI 263
           GW +P  SDH PV+++LD+
Sbjct: 300 GWDRPKASDHCPVVMTLDL 318


>gi|281312468|sp|Q28FQ5|TYDP2_XENTR RecName: Full=Tyrosyl-DNA phosphodiesterase 2; Short=Tyr-DNA
           phosphodiesterase 2; AltName: Full=5'-tyrosyl-DNA
           phosphodiesterase; Short=5'-Tyr-DNA phosphodiesterase;
           AltName: Full=TRAF and TNF receptor-associated protein
           homolog
          Length = 373

 Score = 44.8 bits (104), Expect = 0.013,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 21/40 (52%), Gaps = 9/40 (22%)

Query: 6   VATWNVNSI-------RARIHNLAAWIKENNPDIICLQET 38
             TWN++ +       RAR   + +++   +PD++ LQE 
Sbjct: 127 FLTWNIDGLDESNVAERAR--GVCSYLALYSPDVVFLQEV 164


>gi|162449652|ref|YP_001612019.1| putative nuclease [Sorangium cellulosum 'So ce 56']
 gi|161160234|emb|CAN91539.1| putative nuclease [Sorangium cellulosum 'So ce 56']
          Length = 257

 Score = 44.8 bits (104), Expect = 0.013,   Method: Composition-based stats.
 Identities = 38/267 (14%), Positives = 70/267 (26%), Gaps = 23/267 (8%)

Query: 7   ATWNV-NSIRARIHNLAAWIKENNPDIICLQE---------TKTEDKNF--PFETLQSLN 54
            T+N+      R   + A +    PD++ LQE          +   +    P     ++ 
Sbjct: 1   MTFNILFGGEDRFEAILAIVAAARPDLLVLQECVGWEDGARLRAVAEAIGAPAGERHAVL 60

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
            +         N VA++S+        H P               ++  + L +   +L 
Sbjct: 61  GNANPRPNGRRNHVAVVSRAPLAGARVHAPEALAHCLVEV---ELSLGGEPLVVLGTHLN 117

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
            G+          +  +    RFA+    L   L      +  P                
Sbjct: 118 AGSEDRRLTEARWLLSLVPPTRFAAGLWALAGDLNALSRRDPYPADLGARLAAAGIEKYG 177

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
                               +     +     ++             R D+++LSP    
Sbjct: 178 SPPRFDTMDSIEAFGWADALLLRPRTSR----WFTALRGRDGAQVETRTDYVLLSPRLAG 233

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSL 261
            L  A +          SDH  VI  L
Sbjct: 234 RLALADVID----VGAASDHHAVIAEL 256


>gi|62858529|ref|NP_001016944.1| tyrosyl-DNA phosphodiesterase 2 [Xenopus (Silurana) tropicalis]
 gi|89268280|emb|CAJ81630.1| novel protein similar to ttrap [Xenopus (Silurana) tropicalis]
 gi|183986439|gb|AAI66146.1| TRAF and TNF receptor associated protein [Xenopus (Silurana)
           tropicalis]
          Length = 384

 Score = 44.8 bits (104), Expect = 0.013,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 21/40 (52%), Gaps = 9/40 (22%)

Query: 6   VATWNVNSI-------RARIHNLAAWIKENNPDIICLQET 38
             TWN++ +       RAR   + +++   +PD++ LQE 
Sbjct: 138 FLTWNIDGLDESNVAERAR--GVCSYLALYSPDVVFLQEV 175


>gi|269867186|ref|XP_002652514.1| exodeoxyribonuclease III [Enterocytozoon bieneusi H348]
 gi|220062326|gb|EED41542.1| exodeoxyribonuclease III [Enterocytozoon bieneusi H348]
          Length = 243

 Score = 44.8 bits (104), Expect = 0.013,   Method: Composition-based stats.
 Identities = 24/220 (10%), Positives = 54/220 (24%), Gaps = 17/220 (7%)

Query: 3   VVTVATWNVNSIRARIH----NLAAWIKENNPDIICLQETKTED----KNFPFETL---- 50
           +V +   NVN IR+           W+     DI C QE +  +      F  +      
Sbjct: 1   MVKIFCLNVNGIRSFEKFHKIPFNNWLLGLGYDIYCFQEIRGNEVSLRYLFTLDDFCTFA 60

Query: 51  ---QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107
                   H      +  N      + +   I+  +  + +         +     + + 
Sbjct: 61  SFHSRAGRHGVATLVRKDNYCCATEEVRKGRILKTIHSNFVLYNCYMPYCSDESLIEAVM 120

Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPL--IFAGDYNIIPQPHDCYN 165
                L                 +          L + E     +  ++++         
Sbjct: 121 ETYDKLTDVLNKEQHPVVILCGDMNATYSMCDNYLYMREYEQLHYVSEWSMSIDHISKVE 180

Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY 205
             I            +     +N  +T+ +    D   +Y
Sbjct: 181 NPIQRGKLHTRDFYMKLQMSSENGIYTEKVAPRIDELPVY 220


>gi|258541736|ref|YP_003187169.1| hypothetical protein APA01_06400 [Acetobacter pasteurianus IFO
           3283-01]
 gi|256632814|dbj|BAH98789.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01]
 gi|256635871|dbj|BAI01840.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-03]
 gi|256638926|dbj|BAI04888.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-07]
 gi|256641980|dbj|BAI07935.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-22]
 gi|256645035|dbj|BAI10983.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-26]
 gi|256648090|dbj|BAI14031.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-32]
 gi|256651143|dbj|BAI17077.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256654134|dbj|BAI20061.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-12]
          Length = 321

 Score = 44.8 bits (104), Expect = 0.014,   Method: Composition-based stats.
 Identities = 34/292 (11%), Positives = 71/292 (24%), Gaps = 41/292 (14%)

Query: 3   VVTVATWNVNSI-----------------R--ARIHNLAAWIKENNPDIICLQETKTEDK 43
            + ++TWN++ +                 R  A I +LA++    + D++ LQE ++   
Sbjct: 49  TLKLSTWNLDWLLDPAHPGYAQAPPDIPHRTSADISSLASYAAHLHGDVVALQEIESPAG 108

Query: 44  NFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
               +      YH+           A+  +                            + 
Sbjct: 109 A--GQLFPFARYHLAISQDHILQHTALAVRADIPFEQNPDVTALDAYATAPTTHHHLRSG 166

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
             + +          +   K     +         +   +    L               
Sbjct: 167 LDITLHQNGQALRILVVHLKAGCPDNLPHASRPACTTLWQQFAALDDWVATRTQHHEAFA 226

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223
                  +            +       T  + +       +                 I
Sbjct: 227 IMGDFNRHLTVHDPLFLTLLRIAPLDLATAGMASPCQGGSYF-----------------I 269

Query: 224 DHIMLSPEA-TSLLHSA--RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQD 272
           DHI+L   A    + ++   I          SDH PV +SL +P   +  Q 
Sbjct: 270 DHIILGGAARAWKVPNSLRVIPLAEETGQNLSDHCPVSISLRLPSTNQPPQP 321


>gi|224582626|ref|YP_002636424.1| hypothetical protein SPC_0810 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|224467153|gb|ACN44983.1| hypothetical protein SPC_0810 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
          Length = 252

 Score = 44.8 bits (104), Expect = 0.014,   Method: Composition-based stats.
 Identities = 28/251 (11%), Positives = 58/251 (23%), Gaps = 27/251 (10%)

Query: 15  RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN--YHIETCGQKSYNGVAILS 72
           R  +  L   ++    DI+CLQE            +++     H E      ++  A   
Sbjct: 27  RFILPELRDAVRTVGADIVCLQEV-MGAHEVHPLHIENWPDTTHYEFLADTMWSDFAYGR 85

Query: 73  KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIK 132
                E               +     ++     R           IT    +  I  + 
Sbjct: 86  NAVYPEGHHGNAVLSRYPIEHYENRDVSVGGSEKRGVLYC-----RITPPMLNRPIHVMC 140

Query: 133 RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192
             L       + +  ++      +             +        +  +  +       
Sbjct: 141 VHLGLRESHRQAQLTMLAGWVNALPESEPVLVAGDFNDWRQKAGPPLNAAGLEEIFTRAH 200

Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPS 252
                T                      +R+D I +     S   +       R W   S
Sbjct: 201 GRPARTFPVSMPL---------------LRLDRIYVKNANASSPTA----LPLRNWRHLS 241

Query: 253 DHTPVIVSLDI 263
           DH P+   + +
Sbjct: 242 DHAPLSAEIHL 252


>gi|255085004|ref|XP_002504933.1| predicted protein [Micromonas sp. RCC299]
 gi|226520202|gb|ACO66191.1| predicted protein [Micromonas sp. RCC299]
          Length = 209

 Score = 44.8 bits (104), Expect = 0.014,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 7/50 (14%)

Query: 6  VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55
          + +W     R R+  +   +K   PD++CLQE   ED +     L    Y
Sbjct: 26 ILSW-----RRRLRGIVQEVKALRPDVLCLQE--CEDFHGIAAALAGCGY 68


>gi|16764176|ref|NP_459791.1| cytoplasmic protein [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|56414087|ref|YP_151162.1| hypothetical protein SPA1940 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|62179380|ref|YP_215797.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|161614949|ref|YP_001588914.1| hypothetical protein SPAB_02703 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|167550511|ref|ZP_02344268.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
 gi|167992044|ref|ZP_02573142.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|168230699|ref|ZP_02655757.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
 gi|168236740|ref|ZP_02661798.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
 gi|168240676|ref|ZP_02665608.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|168263689|ref|ZP_02685662.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|168466402|ref|ZP_02700264.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|168820041|ref|ZP_02832041.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|194443379|ref|YP_002040048.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
 gi|194450151|ref|YP_002044841.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|194471467|ref|ZP_03077451.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|194734200|ref|YP_002113904.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           CVM19633]
 gi|197251468|ref|YP_002145768.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Agona str. SL483]
 gi|197363010|ref|YP_002142647.1| hypothetical protein SSPA1809 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|198243219|ref|YP_002214776.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|200390368|ref|ZP_03216979.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
 gi|204929865|ref|ZP_03220886.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|205352071|ref|YP_002225872.1| hypothetical protein SG0792 [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207856250|ref|YP_002242901.1| hypothetical protein SEN0759 [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|238913372|ref|ZP_04657209.1| hypothetical protein SentesTe_19906 [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|16419319|gb|AAL19750.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|56128344|gb|AAV77850.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|62127013|gb|AAX64716.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|161364313|gb|ABX68081.1| hypothetical protein SPAB_02703 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194402042|gb|ACF62264.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
 gi|194408455|gb|ACF68674.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|194457831|gb|EDX46670.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|194709702|gb|ACF88923.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           CVM19633]
 gi|195630975|gb|EDX49561.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|197094487|emb|CAR60004.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|197215171|gb|ACH52568.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Agona str. SL483]
 gi|197290109|gb|EDY29466.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
 gi|197937735|gb|ACH75068.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|199602813|gb|EDZ01359.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
 gi|204320859|gb|EDZ06060.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|205271852|emb|CAR36687.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|205324628|gb|EDZ12467.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
 gi|205329612|gb|EDZ16376.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar 4,[5],12:i:- str.
           CVM23701]
 gi|205334664|gb|EDZ21428.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Kentucky str. CDC 191]
 gi|205339836|gb|EDZ26600.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|205343080|gb|EDZ29844.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|205347702|gb|EDZ34333.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|206708053|emb|CAR32344.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|261246071|emb|CBG23873.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267992555|gb|ACY87440.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301157398|emb|CBW16887.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312911837|dbj|BAJ35811.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           T000240]
 gi|320085086|emb|CBY94873.1| Uncharacterized protein ybhP [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
 gi|321226386|gb|EFX51437.1| Endonuclease/Exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           TN061786]
 gi|322616289|gb|EFY13198.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           315996572]
 gi|322619539|gb|EFY16414.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-1]
 gi|322622765|gb|EFY19610.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-3]
 gi|322628677|gb|EFY25464.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           495297-4]
 gi|322631615|gb|EFY28371.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           515920-1]
 gi|322637141|gb|EFY33844.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           515920-2]
 gi|322641659|gb|EFY38295.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str. 531954]
 gi|322644546|gb|EFY41086.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           NC_MB110209-0054]
 gi|322648478|gb|EFY44930.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           OH_2009072675]
 gi|322654215|gb|EFY50538.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
 gi|322658130|gb|EFY54397.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str. 19N]
 gi|322663604|gb|EFY59806.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           81038-01]
 gi|322670340|gb|EFY66480.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MD_MDA09249507]
 gi|322671576|gb|EFY67698.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str. 414877]
 gi|322676932|gb|EFY72999.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str. 366867]
 gi|322682857|gb|EFY78876.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str. 413180]
 gi|322686536|gb|EFY82518.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str. 446600]
 gi|322713851|gb|EFZ05422.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
 gi|323129120|gb|ADX16550.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|323194567|gb|EFZ79760.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           609458-1]
 gi|323199102|gb|EFZ84198.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           556150-1]
 gi|323202057|gb|EFZ87116.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str. 609460]
 gi|323208917|gb|EFZ93854.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           507440-20]
 gi|323215246|gb|EFZ99991.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB101509-0077]
 gi|323220835|gb|EGA05273.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB102109-0047]
 gi|323227306|gb|EGA11474.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB110209-0055]
 gi|323229924|gb|EGA14047.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           MB111609-0052]
 gi|323233149|gb|EGA17245.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           2009083312]
 gi|323240884|gb|EGA24926.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           2009085258]
 gi|323243201|gb|EGA27221.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           315731156]
 gi|323248740|gb|EGA32668.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2009159199]
 gi|323251744|gb|EGA35611.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008282]
 gi|323258764|gb|EGA42421.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008283]
 gi|323260691|gb|EGA44296.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008284]
 gi|323267872|gb|EGA51351.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008285]
 gi|323268742|gb|EGA52202.1| endonuclease/exonuclease/phosphatase family protein [Salmonella
           enterica subsp. enterica serovar Montevideo str.
           IA_2010008287]
 gi|326622531|gb|EGE28876.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
 gi|326627113|gb|EGE33456.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 252

 Score = 44.8 bits (104), Expect = 0.014,   Method: Composition-based stats.
 Identities = 28/251 (11%), Positives = 58/251 (23%), Gaps = 27/251 (10%)

Query: 15  RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN--YHIETCGQKSYNGVAILS 72
           R  +  L   ++    DI+CLQE            +++     H E      ++  A   
Sbjct: 27  RFILPELRDAVRTVGADIVCLQEV-MGAHEVHPLHIENWPDTTHYEFLADTMWSDFAYGR 85

Query: 73  KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIK 132
                E               +     ++     R           IT    +  I  + 
Sbjct: 86  NAVYPEGHHGNAVLSRYPIEHYENRDVSVGGSEKRGVLYC-----RITPPMLNRPIHVMC 140

Query: 133 RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192
             L       + +  ++      +             +        +  +  +       
Sbjct: 141 VHLGLRESHRQAQLTMLAGWVNALPESEPVLVAGDFNDWRQKAGPPLNAAGLEEIFTRAH 200

Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPS 252
                T                      +R+D I +     S   +       R W   S
Sbjct: 201 GRPARTFPVSMPL---------------LRLDRIYVKNANASSPTA----LPLRNWRHLS 241

Query: 253 DHTPVIVSLDI 263
           DH P+   + +
Sbjct: 242 DHAPLSAEIHL 252


>gi|27366781|ref|NP_762308.1| metal-dependent hydrolase [Vibrio vulnificus CMCP6]
 gi|27358348|gb|AAO07298.1|AE016809_60 Metal-dependent hydrolase [Vibrio vulnificus CMCP6]
          Length = 297

 Score = 44.8 bits (104), Expect = 0.014,   Method: Composition-based stats.
 Identities = 45/292 (15%), Positives = 85/292 (29%), Gaps = 53/292 (18%)

Query: 4   VTVATWNVNSIR----ARIH----------NLAAWIKENNPDIICLQET-------KT-- 40
           +T  +WN+  +     AR+            LA + ++ N D++  QE        K   
Sbjct: 28  MTFTSWNMEWLSSTPSARVKESHRNEEDFAKLAMYFQKTNSDVLAFQEVNDLAAIKKVVG 87

Query: 41  EDKNFPFETLQSLNYH-IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF 99
            +    F    +  Y   +      Y G AI       ++                    
Sbjct: 88  TNYQILFSDRSNPRYQRFQFDDINQYTGFAIKKGIPFRDVGDIQLNKGNSKLRFASYVII 147

Query: 100 TINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRL-ELEEPLIFAGDYNIIP 158
              +  L + N++L  G          K +   R LR  SQ L +            ++ 
Sbjct: 148 GNTSNELHVLNVHLKAG-----CSGAYKGNDACRTLRLESQALGQWISQRQSNKQTYLVL 202

Query: 159 QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN 218
              +       +          +     ++      +R+    + ++SF           
Sbjct: 203 GDFNHNLAYRNDWLMNELTSAGKIHLLTEDTKANCKVRSKKQPNKVHSFRSL-------- 254

Query: 219 KGIRIDHIMLSPEA------TSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
               IDHI++S           L  S  +        + SDH PV  ++ +P
Sbjct: 255 ----IDHIIVSEGLSASQAEQKLFTSNDVLKY-----QLSDHCPVSTTVTLP 297


>gi|37676556|ref|NP_936952.1| hypothetical protein VVA0896 [Vibrio vulnificus YJ016]
 gi|37201098|dbj|BAC96922.1| hypothetical protein [Vibrio vulnificus YJ016]
          Length = 297

 Score = 44.8 bits (104), Expect = 0.014,   Method: Composition-based stats.
 Identities = 45/292 (15%), Positives = 85/292 (29%), Gaps = 53/292 (18%)

Query: 4   VTVATWNVNSIR----ARIH----------NLAAWIKENNPDIICLQET-------KT-- 40
           +T  +WN+  +     AR+            LA + ++ N D++  QE        K   
Sbjct: 28  MTFTSWNMEWLSSTPSARVKESHRNEEDFAKLAMYFQKTNSDVLAFQEVNDLAAIKKVVG 87

Query: 41  EDKNFPFETLQSLNYH-IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF 99
            +    F    +  Y   +      Y G AI       ++                    
Sbjct: 88  TNYQILFSDRSNPRYQRFQFDDINQYTGFAIKKGIPFRDVGDIQLNKGNSKLRFASYVII 147

Query: 100 TINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRL-ELEEPLIFAGDYNIIP 158
              +  L + N++L  G          K +   R LR  SQ L +            ++ 
Sbjct: 148 GNTSNELHVLNVHLKAG-----CSGAYKGNDACRTLRLESQALGQWISQRQSNKQTYLVL 202

Query: 159 QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN 218
              +       +          +     ++      +R+    + ++SF           
Sbjct: 203 GDFNHNLAYRNDWLMNELTSAGKIHLLTEDTKANCKVRSKKQPNKVHSFRSL-------- 254

Query: 219 KGIRIDHIMLSPEA------TSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
               IDHI++S           L  S  +        + SDH PV  ++ +P
Sbjct: 255 ----IDHIIVSEGLSASQAEQKLFTSNDVLKY-----QLSDHCPVSTTVTLP 297


>gi|167619814|ref|ZP_02388445.1| endonuclease/exonuclease/phosphatase family superfamily protein
           [Burkholderia thailandensis Bt4]
          Length = 123

 Score = 44.8 bits (104), Expect = 0.014,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 17/38 (44%), Gaps = 4/38 (10%)

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           D   ++      +    ID    G T+ SDH P+++ L
Sbjct: 87  DFAFVTDTLAHRISRCEID----GATRASDHQPIVLEL 120


>gi|206975161|ref|ZP_03236075.1| putative secreted protein [Bacillus cereus H3081.97]
 gi|206746582|gb|EDZ57975.1| putative secreted protein [Bacillus cereus H3081.97]
          Length = 264

 Score = 44.8 bits (104), Expect = 0.014,   Method: Composition-based stats.
 Identities = 40/279 (14%), Positives = 78/279 (27%), Gaps = 35/279 (12%)

Query: 2   SVVTVATWNV---NSIRA-RIHNLAAWIKENNPDIICLQETKT-----EDKNFPFETLQS 52
           +++ +AT+N+   +S+   R+  +   I+  +P I+ LQE ++       KN        
Sbjct: 6   NLLRIATFNIWNHDSLWLERLEAICEEIRTISPHILALQEVRSCVNLNSKKNVAQYIAGQ 65

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           + Y      +   +    L+    I I      ++   +    E+ +     T       
Sbjct: 66  IGYPFGIFKEYPDSPDEGLAFLSKIPI----IAEEAIWETDIEESNYCAIRITFTYKGCK 121

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
               N   + K           +    +    +  L+     +        Y       D
Sbjct: 122 FGVTNVHLNWKSSRIRQEQMNTVNNWIENRASDYELLCGDFNDDPFSMVHQYLIRKHWID 181

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                E+ ++      + +        D                     R D IM+   A
Sbjct: 182 VAQFKEIEENMIAQPTLDYRKNPNLKDDVKQE----------------KRYDWIMIQENA 225

Query: 233 T---SLLHSARIDTKP---RGWTKPSDHTPVIVSLDIPE 265
                 + +  I            PSDH  V V L   E
Sbjct: 226 AFEFPTIENVSIFGDSALNSTGMFPSDHYGVFVDLKFNE 264


>gi|153207659|ref|ZP_01946323.1| endonuclease/exonuclease/phosphatase family protein [Coxiella
           burnetii 'MSU Goat Q177']
 gi|212218503|ref|YP_002305290.1| endonuclease/Exonuclease/phosphatase family protein [Coxiella
           burnetii CbuK_Q154]
 gi|120576478|gb|EAX33102.1| endonuclease/exonuclease/phosphatase family protein [Coxiella
           burnetii 'MSU Goat Q177']
 gi|212012765|gb|ACJ20145.1| endonuclease/Exonuclease/phosphatase family protein [Coxiella
           burnetii CbuK_Q154]
          Length = 255

 Score = 44.8 bits (104), Expect = 0.014,   Method: Composition-based stats.
 Identities = 38/270 (14%), Positives = 67/270 (24%), Gaps = 38/270 (14%)

Query: 5   TVATWNVN-SIRARIHNLA-----AWIKENNPDIICLQET-----KTEDKNFPFETLQSL 53
           TV ++N++    AR            ++  + DI+ LQE      K+  K F    L   
Sbjct: 12  TVLSYNIHKGFSARYRRFVLPDIREALRAIDADIVLLQEVQGKHRKSRLKKFAHADL--- 68

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
                             SK+       +            +        + + + +L  
Sbjct: 69  ----------PQTEFIAESKWPHYMYGKNAVYGSAHHGNALLSNFPFKMVENINV-SLSQ 117

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
                I     D + +     +         E           I      + P+I   D 
Sbjct: 118 RASRSILHAIIDYEPTVELHVICIHLGLFRAERDYQLITLIKRIEAHVPSHAPLIIAGDF 177

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
                   ++ + +                 Y        S    +  RI +        
Sbjct: 178 NDWRRGAFNYMEKELELKEVYKVLEGKHAKTY------PASRPTLEVDRIYY----RGL- 226

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             L S  I  +   W K SDH P+     I
Sbjct: 227 -KLLSGEIFNESY-WKKLSDHLPLHAKFAI 254


>gi|46108350|ref|XP_381233.1| hypothetical protein FG01057.1 [Gibberella zeae PH-1]
          Length = 476

 Score = 44.8 bits (104), Expect = 0.014,   Method: Composition-based stats.
 Identities = 49/296 (16%), Positives = 80/296 (27%), Gaps = 44/296 (14%)

Query: 2   SVVTVATWNVNSIR-------ARIHNLAAWIKEN--NPDIICLQETKTED--KNFPFETL 50
           S + + T N   +R       AR+  +   I      P I+ LQE  T++  +     T 
Sbjct: 29  SNINLLTLNCWGLRYISTQRNARLDEIGRRIAHAVPTPQIVALQECFTQEDYEAIRHHTR 88

Query: 51  QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
           Q L Y           G+AILS +   EI        L   A               +  
Sbjct: 89  QILPYGKFYHSGAFGGGLAILSHWPIEEIAQSWEMSKLLRGAAERGHLVVGMGD-FNMFP 147

Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170
           L + H     +    D    +             E+           P P   +N +   
Sbjct: 148 LSIYHRVITGNAPVRDVWRILHPDSSLGPAYHPSEKDRH-------RPLPTADFNLLENG 200

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230
             +       +  +  QN      I                       +G R+D+I  S 
Sbjct: 201 VTSNSVYNTWRWNKNQQNRLTKGEICEVPPDTI-------------DPRGQRLDYIFAST 247

Query: 231 EATS---------LLHSARI---DTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDST 274
                        ++ +A +   +  P      SDH  V  +L    P      + 
Sbjct: 248 GVDPDAPAKTPGWVVKTAHVSMTERHPDLLCSLSDHFAVQATLTRHTPSPAPIPAD 303


>gi|237654298|ref|YP_002890612.1| endonuclease/exonuclease/phosphatase [Thauera sp. MZ1T]
 gi|237625545|gb|ACR02235.1| Endonuclease/exonuclease/phosphatase [Thauera sp. MZ1T]
          Length = 249

 Score = 44.8 bits (104), Expect = 0.014,   Method: Composition-based stats.
 Identities = 42/281 (14%), Positives = 87/281 (30%), Gaps = 59/281 (20%)

Query: 4   VTVATWNVN-SI-----RARIHNLAAWIKENNPDIICLQETKT----------------E 41
           + + ++N++        R  +H L   ++  + D++ LQE +                 +
Sbjct: 3   LRICSYNIHKGFSQFNRRMVVHELRDRLRSLDADLVFLQEVQGLHLGHPARHPDWPALPQ 62

Query: 42  DKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI 101
            +    +  Q + Y         ++G AILS++  +        D    +   +     +
Sbjct: 63  HEFLAEDAWQQIAYGGNAIYDHGHHGNAILSRHLILSTANQDVSDHRFERRGLLHCEVQL 122

Query: 102 NTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161
               + +  + +  G    S     +   ++       +      PLI AGD+N      
Sbjct: 123 PEFDVPVHCVCVHLGLMAGS-----RRRQMEALAERMEELAPGNAPLIIAGDFND----- 172

Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI 221
                  W N A   L  R    +    G     R+   T   +                
Sbjct: 173 -------WRNRADDLLGRRLGLAEAFGSGRGRPARSYPSTLPFF---------------- 209

Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
           R+D I +       +  A++      W + SDH  +   L+
Sbjct: 210 RLDRIYVRGF---RVRQAQVHYGA-PWARISDHAALTADLE 246


>gi|169827405|ref|YP_001697563.1| endonuclease yhcR [Lysinibacillus sphaericus C3-41]
 gi|168991893|gb|ACA39433.1| Endonuclease yhcR precursor [Lysinibacillus sphaericus C3-41]
          Length = 1379

 Score = 44.8 bits (104), Expect = 0.014,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 30/73 (41%), Gaps = 10/73 (13%)

Query: 200  DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT---KPSDHTP 256
                 ++++      +  N  + +DHI++S     +     I           + SDH P
Sbjct: 1199 PEQDRFTYF------FQGNNQV-LDHILVSNHLADVTEIDLIHMNANFTEAQGRASDHDP 1251

Query: 257  VIVSLDIPEPRKK 269
            V+V +D+   +++
Sbjct: 1252 VLVQIDLQAGKEE 1264


>gi|322374633|ref|ZP_08049147.1| RgfB protein [Streptococcus sp. C300]
 gi|321280133|gb|EFX57172.1| RgfB protein [Streptococcus sp. C300]
          Length = 271

 Score = 44.8 bits (104), Expect = 0.014,   Method: Composition-based stats.
 Identities = 33/267 (12%), Positives = 80/267 (29%), Gaps = 20/267 (7%)

Query: 4   VTVATWNVNSI--RARIHNLAAWIKEN---NPDIICLQETKTEDKNFPFETLQSLNY--- 55
           +   T N +S   +         +++    + D+IC QE     +    E   + +Y   
Sbjct: 1   MKFLTLNTHSWMEKEAEEKFQILLQDILDKDYDLICFQEI--NQEMTSPEVEVNNHYQAL 58

Query: 56  ------HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
                 H +   +     +A   K        +  G D   +   I +   I  + + + 
Sbjct: 59  PSAEPIHQDHYVRLLVEKLAEKGKNYYWTWAYNHVGYDRYHEGVAILSKTPIKAREILVS 118

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG-DYNIIPQPHDCYNPII 168
           ++  P           +     K     +      ++        +  + +  +    + 
Sbjct: 119 DVDDPTDYHTRRVALAETEVEGKELALASVHLSWWDKGFQEEWARFEAVLKELNKPLILA 178

Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
            + +     E  Q+      +G  DA     +    Y+            + +RID++  
Sbjct: 179 GDFNNPAGQEGYQAILASP-LGLQDAFEVAKERSGSYTVPPEIDGWKGNTEPLRIDYVFT 237

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHT 255
           + E    + S ++    +   + SDH 
Sbjct: 238 TKELE--VESLQVVFDGQNSPQVSDHY 262


>gi|228476525|ref|ZP_04061215.1| metal-dependent hydrolase [Streptococcus salivarius SK126]
 gi|228251946|gb|EEK10992.1| metal-dependent hydrolase [Streptococcus salivarius SK126]
          Length = 303

 Score = 44.8 bits (104), Expect = 0.015,   Method: Composition-based stats.
 Identities = 29/278 (10%), Positives = 68/278 (24%), Gaps = 26/278 (9%)

Query: 2   SVVTVATWNVNSIRARIH----NLAAWIKEN----NPDIICLQETKTEDKNFPFETLQ-S 52
            ++   T N +S    +          +KE       DIIC QE    ++      +   
Sbjct: 31  KLMKFLTLNTHS---WMEEDAEGKFQTLKEQILKAQYDIICFQEV---NQEIETSVVDTD 84

Query: 53  LNYHIETCGQKSYNGVAIL---------SKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
             YH        +    +                    +  G D   +   + +   +  
Sbjct: 85  AYYHALPSATPIHQDHFVRLLVEKLAEEGLQYHWTWAYNHIGYDHLNEGVAVLSRQPLTA 144

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
             + + ++  P           +     +     +      ++                 
Sbjct: 145 SEILVSDVDDPTDYHTRRVAVAETTVDGREVAVASVHLSWWDKGFQEEWARIEERFKAIG 204

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223
              I+  +                ++   D+     +T   Y+            + +RI
Sbjct: 205 KPLILAGDFNNPAGREGHQAILASSLNLQDSFEVAKETTGSYTVGPGIDGWKGNEEPLRI 264

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           D++  S + T  +    +          SDH  +   L
Sbjct: 265 DYVFASQDWT--VERLSVIFDGNNQPLVSDHYGLEAEL 300


>gi|218699162|ref|YP_002406791.1| putative metal-dependent hydrolase [Escherichia coli IAI39]
 gi|218369148|emb|CAR16903.1| putative metal-dependent hydrolase [Escherichia coli IAI39]
          Length = 253

 Score = 44.8 bits (104), Expect = 0.015,   Method: Composition-based stats.
 Identities = 34/267 (12%), Positives = 64/267 (23%), Gaps = 32/267 (11%)

Query: 5   TVATWNVN-SI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN--YH 56
            V T N++        R  +  L   ++  + DI+CLQE            +++     H
Sbjct: 11  KVLTINIHKGFTAFNRRFILPELRDAVRTVSADIVCLQEV-MGAHEVHPLHVENWPDTSH 69

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
            E      ++  A        E               +     +++    R         
Sbjct: 70  YEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIENYENRDVSVDGAEKRGVLYCRIVP 129

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
                  +   +    R     +Q   L E +    D   +    D  +     N     
Sbjct: 130 PMTGKAIHVMCVHLGLREAHRQAQLAMLAEWVNELPDGEPVLVAGDFNDWRQKANHPLKV 189

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
                      +                                +R+D I +     +  
Sbjct: 190 QAGLDEIFTRAHGRPARTFPVQFPL-------------------LRLDRIYV----KNAS 226

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263
            SA      R W   SDH P+   + +
Sbjct: 227 TSAPTALPLRTWRHLSDHAPLSAEIHL 253


>gi|147787189|emb|CAN66833.1| hypothetical protein VITISV_030891 [Vitis vinifera]
          Length = 1767

 Score = 44.8 bits (104), Expect = 0.015,   Method: Composition-based stats.
 Identities = 30/234 (12%), Positives = 59/234 (25%), Gaps = 29/234 (12%)

Query: 27  ENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGD 86
             N D+ CLQETK  + +                      GV              L   
Sbjct: 705 SINYDV-CLQETKMTEMSL---------------------GVVRSLGVGRFLEWGALDAR 742

Query: 87  DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEE 146
                         +    L +G   +          +    S +        +    EE
Sbjct: 743 GAAGGVVVFWDNRVLELMGLEVGLFSISCRFKNVEDGFRWTFSGVYGPTLKRYREAFWEE 802

Query: 147 PLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYS 206
                G +         +N   + N+      V  S ++   +     +R        ++
Sbjct: 803 LGAIRGLWTDPWCIEGDFNMTRFSNERRRGGRVSSSMRRFSEVIDELELRDLPLQGGPFT 862

Query: 207 FWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
           +    +   +     RID  ++S +            +       SDH P+++ 
Sbjct: 863 W----SGGLNNQTMSRIDRFLVSEDWEGYFKGVV---QSTLSRPVSDHFPILLD 909


>gi|331266731|ref|YP_004326361.1| metal-dependent hydrolase superfamily protein [Streptococcus oralis
           Uo5]
 gi|326683403|emb|CBZ01021.1| metal-dependent hydrolase superfamily protein [Streptococcus oralis
           Uo5]
          Length = 271

 Score = 44.8 bits (104), Expect = 0.015,   Method: Composition-based stats.
 Identities = 33/267 (12%), Positives = 80/267 (29%), Gaps = 20/267 (7%)

Query: 4   VTVATWNVNSI--RARIHNLAAWIKEN---NPDIICLQETKTEDKNFPFETLQSLNY--- 55
           +   T N +S   +         +++    + D+IC QE     +    E   + +Y   
Sbjct: 1   MKFLTLNTHSWMEKEAEEKFQILLRDILDKDYDLICFQEI--NQEMTSPEVEVNNHYQAL 58

Query: 56  ------HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
                 H +   +     +A   K        +  G D   +   I +   I  + + + 
Sbjct: 59  PSAEPIHQDHYVRLLVEKLAEKGKNYYWTWAYNHIGYDRYHEGVAILSKTPIKAREILVS 118

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG-DYNIIPQPHDCYNPII 168
           ++  P           +     K     +      ++        +  + +  +    + 
Sbjct: 119 DVDDPTDYHTRRVALAETEVEGKELALASVHLSWWDKGFQEEWARFEAVLKELNKPLILA 178

Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
            + +     E  Q+      +G  DA     +    Y+            + +RID++  
Sbjct: 179 GDFNNPAGQEGYQAILASP-LGLQDAFEVAKERSGSYTVPPEIDGWKGNTEPLRIDYVFT 237

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHT 255
           + E    + S ++    +   + SDH 
Sbjct: 238 TKELE--VESLQVVFDGQNSPQVSDHY 262


>gi|323967391|gb|EGB62812.1| endonuclease/Exonuclease/phosphatase [Escherichia coli M863]
 gi|327253576|gb|EGE65205.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia
           coli STEC_7v]
          Length = 253

 Score = 44.8 bits (104), Expect = 0.015,   Method: Composition-based stats.
 Identities = 34/267 (12%), Positives = 64/267 (23%), Gaps = 32/267 (11%)

Query: 5   TVATWNVN-SI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN--YH 56
            V T N++        R  +  L   ++  + DI+CLQE            +++     H
Sbjct: 11  KVLTINIHKGFTAFNRRFILPELRDAVRTVSADIVCLQEV-MGAHEVHPLHVENWPDTSH 69

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
            E      ++  A        E               +     +++    R         
Sbjct: 70  YEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVP 129

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
                  +   +    R     +Q   L E +    D   +    D  +     N     
Sbjct: 130 PMTGKAIHVMCVHLGLREAHRQAQLAMLAEWVNELPDGEPVLVAGDFNDWRQKANHPLKM 189

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
                      +                                +R+D I +     +  
Sbjct: 190 QAGLDEIFTRAHGRPARTFPVQFPL-------------------LRLDRIYV----KNAS 226

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263
            SA      R W   SDH P+   + +
Sbjct: 227 ASAPTALPLRTWRHLSDHAPLSAEIHL 253


>gi|82702653|ref|YP_412219.1| endonuclease/exonuclease/phosphatase [Nitrosospira multiformis ATCC
           25196]
 gi|82410718|gb|ABB74827.1| Endonuclease/exonuclease/phosphatase [Nitrosospira multiformis ATCC
           25196]
          Length = 228

 Score = 44.8 bits (104), Expect = 0.015,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 67/265 (25%), Gaps = 44/265 (16%)

Query: 4   VTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           +T+AT+N++       R +   +   ++E N DII LQE          E  Q   Y + 
Sbjct: 3   MTLATYNIHGCIGADGRFKPDRIIDVLQEMNADIIALQEV---------EHHQVEGYDLL 53

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
                     AI           +                  +N   L +          
Sbjct: 54  DYFAVKTGFTAIAGPTLVRRTHHY------GNALLTKLPVLAVNRIDLTLPGREPRGALD 107

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
           +T    D ++  +   L         +   +                  +   D      
Sbjct: 108 VTLAWNDRRVHVVATHLGLRPSERRQQVRHLL------KLFEIRLTEIYVLMGDLNEWFL 161

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
             +  + L          AT      +               + +D + + P     L S
Sbjct: 162 WGRPLRWLHAHFKRPPHCATFPARKPF---------------MALDRLWVHPR--RRLKS 204

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263
               +        SDH P+   ++I
Sbjct: 205 LEAHSSSLARI-ASDHLPLKAIIEI 228


>gi|120553053|ref|YP_957404.1| endonuclease/exonuclease/phosphatase [Marinobacter aquaeolei VT8]
 gi|120322902|gb|ABM17217.1| Endonuclease/exonuclease/phosphatase [Marinobacter aquaeolei VT8]
          Length = 586

 Score = 44.8 bits (104), Expect = 0.015,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 29/87 (33%), Gaps = 22/87 (25%)

Query: 192 TDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID----TKPR- 246
                        Y++  Y        KG  +D+ + SP     +  A+I      +PR 
Sbjct: 503 HQYYPCLPMQCEHYTY-RYQGQ-----KGT-LDYALASPALMPWIEQAQIWNINADEPRA 555

Query: 247 ----------GWTKPSDHTPVIVSLDI 263
                     G  + SDH PV+  L +
Sbjct: 556 LSYRQTPDQSGPWRSSDHNPVLTDLKL 582


>gi|116194258|ref|XP_001222941.1| hypothetical protein CHGG_03727 [Chaetomium globosum CBS 148.51]
 gi|88179640|gb|EAQ87108.1| hypothetical protein CHGG_03727 [Chaetomium globosum CBS 148.51]
          Length = 1425

 Score = 44.8 bits (104), Expect = 0.015,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 18/55 (32%), Gaps = 4/55 (7%)

Query: 219 KGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDS 273
            G  ID ++ S E    +    +     G    SDH  +    DI  P     D 
Sbjct: 508 YGSTIDLVLASEELAEAVIRCGVHRTEHG----SDHRAIETVFDIEVPVPTHHDR 558


>gi|156363320|ref|XP_001625993.1| predicted protein [Nematostella vectensis]
 gi|156212852|gb|EDO33893.1| predicted protein [Nematostella vectensis]
          Length = 251

 Score = 44.8 bits (104), Expect = 0.015,   Method: Composition-based stats.
 Identities = 31/236 (13%), Positives = 69/236 (29%), Gaps = 16/236 (6%)

Query: 27  ENNPDIICLQETKTE-DKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPG 85
           + + DI+ + ET             +++ Y              ++SK     ++   P 
Sbjct: 24  KRDIDIMGISETHWTGQGKMQLRDGETMVYSGREDNIHREGVGILMSKNAAACLIEWTPW 83

Query: 86  DDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELE 145
           ++  +QARF      +    +                  D+  + ++  L   +Q   + 
Sbjct: 84  NERMIQARFYSRHIQLTIIHIY------APTEDADEHLKDEFYTRLQEVLDSRNQHDMVI 137

Query: 146 EPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY 205
                          ++               E       L  +  T  +      H   
Sbjct: 138 ITGDMNAKVGGQNWDYERVMGKHGLGVRNDNGERLCELCDLNELVITGTLFPHRTIHKA- 196

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           ++     D  +KN+   IDH++++    + +   R+    R     SDH  V  + 
Sbjct: 197 TWIS--PDGKTKNQ---IDHVLVNKRFRNSVKDTRVF---RSADVGSDHYLVCATY 244


>gi|117618538|ref|YP_855175.1| endonuclease/exonuclease/phosphatase family protein [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
 gi|117559945|gb|ABK36893.1| endonuclease/exonuclease/phosphatase family [Aeromonas hydrophila
           subsp. hydrophila ATCC 7966]
          Length = 371

 Score = 44.8 bits (104), Expect = 0.015,   Method: Composition-based stats.
 Identities = 42/278 (15%), Positives = 81/278 (29%), Gaps = 43/278 (15%)

Query: 4   VTVATWNV-------NSIRARIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNY 55
           + VA++NV        SI  R+  L  ++K  +   + LQE      + F     +   Y
Sbjct: 107 LKVASYNVWALPVIAASIGERLALLPEYLKGYDA--LLLQEVFDGRREGFLQALAKEYPY 164

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
                 +   N       +    ++        + Q  + + T T       +    +  
Sbjct: 165 QTRVLDKPGVN------IHDGGVVIVSRYPIVREAQLVYPQCTGTDCFADKGVMYAEVIK 218

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
           G       +    +          ++++  +    A    I       Y      N   F
Sbjct: 219 GG-KAWHLFATHTASFDTDEARRLRQIQFGQIRTLAASLKIPASDTVIYGGDFNVNKRKF 277

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYS--FWDYYADSWS-------KNKGIRIDHI 226
             +           G    + A    +  Y+   +D   + ++        N    +D++
Sbjct: 278 ADDY---------AGMLANLNADEPGYGGYTEATFDPRINPYAGGPLSGGANVEY-LDYL 327

Query: 227 MLSPE---ATSLLHSARIDTKPRGWTKP----SDHTPV 257
           + S E       L+S  I     G   P    SDH PV
Sbjct: 328 VASREYGAVCHNLNSVWIPRSSDGSLWPASNLSDHFPV 365


>gi|323351045|ref|ZP_08086702.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis
           VMC66]
 gi|322122769|gb|EFX94478.1| endonuclease/exonuclease/phosphatase [Streptococcus sanguinis
           VMC66]
          Length = 749

 Score = 44.8 bits (104), Expect = 0.015,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 28/72 (38%), Gaps = 10/72 (13%)

Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT---K 250
            +   HD    YS++ Y   + S      +D+I +S         A +           +
Sbjct: 600 NLMQEHDVADRYSYF-YRGSNQS------LDNIFISKNLAGKTVFAPVHINASFMEEHGR 652

Query: 251 PSDHTPVIVSLD 262
            SDH PV+V LD
Sbjct: 653 ASDHDPVVVQLD 664


>gi|315299279|gb|EFU58531.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 16-3]
          Length = 253

 Score = 44.8 bits (104), Expect = 0.015,   Method: Composition-based stats.
 Identities = 34/267 (12%), Positives = 64/267 (23%), Gaps = 32/267 (11%)

Query: 5   TVATWNVN-SI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN--YH 56
            V T N++        R  +  L   ++  + DI+CLQE            +++     H
Sbjct: 11  KVLTINIHKGFTAFNRRFILPELRDAVRTVSADIVCLQEV-MGAHEVHLLHVENWPDTSH 69

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
            E      ++  A        E               +     +++    R         
Sbjct: 70  YEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVP 129

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
                  +   +    R     +Q   L E +    D   +    D  +     N     
Sbjct: 130 PMTGKAIHVMCVHLGLREAHRQAQLAMLAEWVNELPDGEPVLVAGDFNDWRQKANHPLKV 189

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
                      +                                +R+D I +     +  
Sbjct: 190 QAGLDEIFTRAHGRPARTFPVQFPL-------------------LRLDRIYV----KNAS 226

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263
            SA      R W   SDH P+   + +
Sbjct: 227 ASAPTALPLRTWRHLSDHAPLSAEIHL 253


>gi|293371500|ref|ZP_06617920.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           ovatus SD CMC 3f]
 gi|292633537|gb|EFF52100.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           ovatus SD CMC 3f]
          Length = 297

 Score = 44.8 bits (104), Expect = 0.015,   Method: Composition-based stats.
 Identities = 32/267 (11%), Positives = 70/267 (26%), Gaps = 25/267 (9%)

Query: 2   SVVTVATWNVN-----SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56
           + + VAT+N+          R   +A  IK+ + +I   +E     +   +   Q  + +
Sbjct: 51  TSMRVATYNLQVETGTGWTNRRERVAQLIKDYDFEICGFEE--ASWEQRSYLGTQLASDY 108

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                 +        +      +        LD    +   T  I +      N      
Sbjct: 109 QILAYGRDTGNDDNKAGEMSGILYKKSRYTLLDAGRFWFSETPEIPSNGWDETNFKRFCV 168

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
                     K  ++       +         +     +   + +         N     
Sbjct: 169 WGKFKDSKTQKEFYLFETHMPLADNARKHACQMLVDAVSDKAKDNTPAFCTGDFNATPDA 228

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
            E+         +       A      L++F              RID I +        
Sbjct: 229 PEIAT-TICQSGILKDAYREAAVQHGALFTFPSKKT---------RIDFIFV-------- 270

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263
             A + +     +  SDH P+++ ++I
Sbjct: 271 KHATVLSTRTIVSSLSDHYPMVIVVEI 297


>gi|218676474|ref|YP_002395293.1| Endonuclease/Exonuclease/phosphatase family [Vibrio splendidus
           LGP32]
 gi|218324742|emb|CAV26393.1| Endonuclease/Exonuclease/phosphatase family [Vibrio splendidus
           LGP32]
          Length = 291

 Score = 44.8 bits (104), Expect = 0.015,   Method: Composition-based stats.
 Identities = 38/276 (13%), Positives = 74/276 (26%), Gaps = 24/276 (8%)

Query: 4   VTVATWN---------VNSI---R--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFET 49
           +T+++WN         VN     R  A    L  + +  N D++  QE    D     + 
Sbjct: 23  LTISSWNIEWLSTNEAVNKFSDQRDQADFDKLEQYFQSLNSDVLAFQEV---DDINAIQR 79

Query: 50  LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
           +    Y I     ++    +     +  +         + +         +     LR  
Sbjct: 80  IAGDQYKIL-MSDRALPENSNHQFKEVNQYTGFAVRKGIILTDYADFPLESGANSKLRFA 138

Query: 110 NLYLPHGNPITSTKYDDKISWIK--RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167
           +  +   +          +       +          ++            +    Y  +
Sbjct: 139 SYMVVETDTKPIHMLSVHLKAGCSGAYKSNRDCSRLKDQAQQLNKWIQQRERQGQDYAIL 198

Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227
              N               QN     A R T     + S      +  +      IDHI+
Sbjct: 199 GDFNHNLSYSRDWMWKDLTQNADAQLATRKTRADCKVRS---NRNNHRTHQFRSVIDHIV 255

Query: 228 LSPEA-TSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
           +S     S       +T+     K SDH PV  ++ 
Sbjct: 256 VSKSLDASPAKQKVFETQDVLDYKLSDHCPVSTTIK 291


>gi|73999461|ref|XP_852673.1| PREDICTED: similar to LINE-1 reverse transcriptase homolog [Canis
           familiaris]
          Length = 1344

 Score = 44.8 bits (104), Expect = 0.015,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 38/110 (34%), Gaps = 12/110 (10%)

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
               + E R     L  M FTD  R  H     Y+F+     ++S      IDHI+    
Sbjct: 227 KHNISKETRALNDTLDQMDFTDIYRTLHPNSTEYTFFSSAHGTFST-----IDHILGHKS 281

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
             +      I          SDH  + + L+    +K  + S    ++ I
Sbjct: 282 GLNRYQKIGIVPCI-----FSDHNALKLELN--HNKKFGRTSNMWRLRTI 324


>gi|307706951|ref|ZP_07643750.1| endonuclease/Exonuclease/phosphatase family protein [Streptococcus
           mitis SK321]
 gi|307617665|gb|EFN96833.1| endonuclease/Exonuclease/phosphatase family protein [Streptococcus
           mitis SK321]
          Length = 271

 Score = 44.8 bits (104), Expect = 0.015,   Method: Composition-based stats.
 Identities = 31/273 (11%), Positives = 80/273 (29%), Gaps = 16/273 (5%)

Query: 4   VTVATWNVNSI--RARIHNLAAWIKEN---NPDIICLQETK-------TEDKNFPFETLQ 51
           +   T N +S   +         +++    + D+IC QE          E  +       
Sbjct: 1   MKFLTLNTHSWMEKEAEEKFQLLLEDILDKDYDLICFQEINQEITSPEVEVNDLYQALPA 60

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
           +   H +   +     ++   K        +  G D   +   I +   I  + + + ++
Sbjct: 61  AEPIHQDHYVRLLVEKLSEQGKDYYWTWAYNHIGYDRYHEGVAILSKTPIEAREILVSDV 120

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG-DYNIIPQPHDCYNPIIWE 170
             P           + +   K     +      ++        +  + +  +    +  +
Sbjct: 121 DDPTDYHTRRVAVAETVVDGKELAVASVHLSWWDKGFQEEWARFEAVLKELNKPLLLAGD 180

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230
            +     E  Q+      +G  DA     +    Y+            + +RID++  + 
Sbjct: 181 FNNPAGQEGYQAILASP-LGLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTTK 239

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           E    + +  +        + SDH  +   L+ 
Sbjct: 240 ELE--VENLHVVFDGNKGPQVSDHYGLNAILNW 270


>gi|302908054|ref|XP_003049782.1| hypothetical protein NECHADRAFT_56855 [Nectria haematococca mpVI
           77-13-4]
 gi|256730718|gb|EEU44069.1| hypothetical protein NECHADRAFT_56855 [Nectria haematococca mpVI
           77-13-4]
          Length = 515

 Score = 44.8 bits (104), Expect = 0.016,   Method: Composition-based stats.
 Identities = 37/262 (14%), Positives = 68/262 (25%), Gaps = 24/262 (9%)

Query: 22  AAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE----TCGQKSYNGVAILSKYQPI 77
             +I  +  DII +QE    D        ++L +H      +    S   +   S     
Sbjct: 251 LRFIVNSKADIIGIQE--DGDGERAKALAEALGWHYWASKVSHSILSKYPIESTSGNINR 308

Query: 78  EIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRF--- 134
                +  D       F  A                   + +   +YD            
Sbjct: 309 SGGARIELDGDWQTVNFWVAHLNYKPYGPYDFCYSGMKADKVMQREYDSGRPTQVEDTLK 368

Query: 135 -LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTD 193
            +++  +  ++E   +                                +  K    G  D
Sbjct: 369 AMKYDLRTADIEPLFLVGDFNAPSHLDWTDKRKKKNCGQG---KFNWPTSMKPTEAGMID 425

Query: 194 AIRATHDTHHLYSFWDYYA-DSWSKNKG-----IRIDHIMLSPEATSLLHSARIDTKPRG 247
           + R  H          Y     W+K+ G      R+D I     A   +  + +   P+ 
Sbjct: 426 SYRVAHPDPDQDEGITYGPITPWNKDWGKEEPHERLDFIYY-MGAGLEVVDSWVMKPPKS 484

Query: 248 W----TKPSDHTPVIVSLDIPE 265
                   SDH+ V+   +I E
Sbjct: 485 GHPLDEWTSDHSAVMTLFNISE 506


>gi|255071615|ref|XP_002499482.1| predicted protein [Micromonas sp. RCC299]
 gi|226514744|gb|ACO60740.1| predicted protein [Micromonas sp. RCC299]
          Length = 539

 Score = 44.8 bits (104), Expect = 0.016,   Method: Composition-based stats.
 Identities = 43/302 (14%), Positives = 82/302 (27%), Gaps = 61/302 (20%)

Query: 1   MSVVTVATWNVNSIRA-------RIHNLAAWIKENNPDIICLQET--------KTED--K 43
           +S V + T+NV    A       RI  L   +   +P +ICLQE           +   +
Sbjct: 257 LSQVRLLTYNV--WFAEHVALVDRIDGLTDIVMREDPHVICLQEVTHNILMLLHAQPWFE 314

Query: 44  NFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
           ++         Y+     ++S N     ++    + +T   G                  
Sbjct: 315 DYKGSPPPQQQYYTIIMFKRSMNKPDGSTRVSRRDFMTSDMGRYAVGFCGMNCGD----G 370

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
           + L +   +L                          Q  +    +    +      P   
Sbjct: 371 KELTVFTSHLES----------FISKERTSSDERVRQMKDALRVIDAVTERRANEYPGTA 420

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI-- 221
               I+  D  +              G+ DA     D    +++ D   +      G   
Sbjct: 421 TRNGIFMGDTNWDETTDGDVPLP--EGWRDAWLTHGDGTEGFTY-DLRKNPMMG--GWLQ 475

Query: 222 -RIDHIM--------------LSPEATSLLHSARID-TKPRGWTK-----PSDHTPVIVS 260
            R+D ++               +        S      + RG  +     PSDH  ++V+
Sbjct: 476 KRLDRVLYRLSDFEVTGIKMVGTEPIKRKDGSVVTYVNEYRGRRETKPVLPSDHFGLMVT 535

Query: 261 LD 262
           L 
Sbjct: 536 LK 537


>gi|269864719|ref|XP_002651673.1| exodeoxyribonuclease III [Enterocytozoon bieneusi H348]
 gi|220064093|gb|EED42383.1| exodeoxyribonuclease III [Enterocytozoon bieneusi H348]
          Length = 231

 Score = 44.8 bits (104), Expect = 0.016,   Method: Composition-based stats.
 Identities = 24/220 (10%), Positives = 54/220 (24%), Gaps = 17/220 (7%)

Query: 3   VVTVATWNVNSIRARIH----NLAAWIKENNPDIICLQETKTED----KNFPFETL---- 50
           +V +   NVN IR+           W+     DI C QE +  +      F  +      
Sbjct: 1   MVKIFCLNVNGIRSFEKFHKIPFNNWLLGLGYDIYCFQEIRGNEVSLRYLFTLDDFCTFA 60

Query: 51  ---QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107
                   H      +  N      + +   I+  +  + +         +     + + 
Sbjct: 61  SFHSRAGRHGVATLVRKDNYCCATEEVRKGRILKTIHSNFVLYNCYMPYCSDESLIEAVM 120

Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPL--IFAGDYNIIPQPHDCYN 165
                L                 +          L + E     +  ++++         
Sbjct: 121 ETYDKLTDVLNKEQHPVVILCGDMNATYSMCDNYLYMREYEQLHYVSEWSMSIDHISKVE 180

Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY 205
             I            +     +N  +T+ +    D   +Y
Sbjct: 181 NPIQRGKLHTRDFYMKLQMSSENGIYTEKVAPRIDELPVY 220


>gi|242797316|ref|XP_002482987.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
 gi|218719575|gb|EED18995.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
          Length = 1249

 Score = 44.8 bits (104), Expect = 0.016,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 19/48 (39%), Gaps = 3/48 (6%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQ 270
           ID +  S    + + S   DTKP  W    DH P+    D+   R   
Sbjct: 181 IDLVWASHNLANRVVSC--DTKPEWWYGA-DHVPISTQFDLTAIRVPP 225


>gi|212535218|ref|XP_002147765.1| reverse transcriptase, putative [Penicillium marneffei ATCC 18224]
 gi|210070164|gb|EEA24254.1| reverse transcriptase, putative [Penicillium marneffei ATCC 18224]
          Length = 1537

 Score = 44.8 bits (104), Expect = 0.016,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 19/58 (32%), Gaps = 4/58 (6%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
           ID ++ S E    +    I     G    SDH  +    DI  P +   +       P
Sbjct: 641 IDLVLASTELAEEMVKYGIHYTNYG----SDHQAIETEFDISVPDRPITERLLWKNAP 694


>gi|224012501|ref|XP_002294903.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220969342|gb|EED87683.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 2488

 Score = 44.4 bits (103), Expect = 0.016,   Method: Composition-based stats.
 Identities = 32/285 (11%), Positives = 69/285 (24%), Gaps = 40/285 (14%)

Query: 3   VVTVATWNVNSIRARIHNL-----AAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57
           ++ VA  N+N                 I+E   DI+ + E    ++ + ++  Q      
Sbjct: 54  ILRVAINNINGTTFHQKGFEVAHEIQTIQELGIDIMAMCE---SNRAWTYKNKQEYERQT 110

Query: 58  ETCGQKSYNGVAIL-------------------SKYQPIEIVTHLPGDDLDVQARFIEAT 98
                 +    A                     +  +     T   G    ++ R     
Sbjct: 111 HLLWHNTRTVFASCPTGAEGYQPGGNVLNINGPAAGRVKATGTDKWGRFCWMELRGQRDE 170

Query: 99  FTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP 158
             +     R+          +T+              R   ++  L++ L          
Sbjct: 171 GWVIISAYRVCQEESHKPGALTAYMQQYTAMLSAGITRPNPRQQILDDLLHLITSKREQG 230

Query: 159 QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN 218
                      +       + + +                  +   Y+      +S    
Sbjct: 231 FRPILLMDANEDWVTNSHGKNQLADFMAAANLQDAFYERHQQSPPTYT----RGNS---- 282

Query: 219 KGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              R+D+I++ P A   +          G    SDH    V  D+
Sbjct: 283 ---RLDYILVDPVALPCIRRVGYLGTHEGN--FSDHCLEYVDFDM 322


>gi|3859723|emb|CAA21997.1| glucose-repressible alcohol dehydrogenase transcriptional effector
           [Candida albicans]
          Length = 589

 Score = 44.4 bits (103), Expect = 0.016,   Method: Composition-based stats.
 Identities = 39/301 (12%), Positives = 74/301 (24%), Gaps = 53/301 (17%)

Query: 17  RIHNLAAWIKENNPDIICLQE--TKT-EDKNFPFETLQSL-NYHI--------------- 57
           R + L   +   N DI+C+QE  TKT ++   P  T      Y                 
Sbjct: 289 RKNLLEKEVLNYNTDIVCMQEVETKTFQEFWLPVMTANGYKGYFFSKTRSKTMSETDSKK 348

Query: 58  ---------------ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN 102
                                 YN V + S              + D  A         +
Sbjct: 349 VDGCATFFKNDKFSLVHKQNFEYNSVCMGSDKYKKTKDLFNRFMNKDNIALISYLQHKES 408

Query: 103 TQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD 162
            + + + N +L         K       ++       +               ++    +
Sbjct: 409 GEKIAVVNTHLHWDPAFNDVKALQVGILLEELQGIIKKYRHTNSNEDIKNSSIVVCGDFN 468

Query: 163 CYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF-------WDYYADSW 215
                                   ++ G        H      ++       +     ++
Sbjct: 469 SVKDSAVYQLFSTGASKGHEDMNGRDYGKFTEDGFHHPFKLKSAYEAVGELPFTNLTPAF 528

Query: 216 SKNKGIRIDHIMLS-PEATSLLHSARIDTKPRG-------WTKPSDHTPVIVSLDIPEPR 267
           + N    ID+I  S P         R+D +             PSDH P++    + + +
Sbjct: 529 TDN----IDYIWYSTPTLQVKGLLGRVDEEYTSHSIGFPDANFPSDHVPILAKFQLKKGK 584

Query: 268 K 268
           K
Sbjct: 585 K 585


>gi|301307705|ref|ZP_07213662.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 20_3]
 gi|300834379|gb|EFK64992.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 20_3]
          Length = 280

 Score = 44.4 bits (103), Expect = 0.016,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 19/39 (48%), Gaps = 2/39 (5%)

Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
           RID+I ++      ++      + +    PSDH P+++ 
Sbjct: 241 RIDYIFVTKNI--HVNKYGTLNEFQYGHYPSDHFPIMIE 277


>gi|282892485|ref|ZP_06300819.1| hypothetical protein pah_c260o038 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281497767|gb|EFB40131.1| hypothetical protein pah_c260o038 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 346

 Score = 44.4 bits (103), Expect = 0.016,   Method: Composition-based stats.
 Identities = 47/271 (17%), Positives = 79/271 (29%), Gaps = 41/271 (15%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKN------FPFETLQSLN---------------Y 55
           R   +   I+  NPD+I  QE   +         F  +                     +
Sbjct: 88  RCSRVVELIQAINPDLIGSQE--LQQDQVEDLLSFLGDEYAFYGKGTLDGKMKGEVNGIF 145

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
           + ++        V  +S                      +E    +  +   I N ++  
Sbjct: 146 YRKSRFNVDNESVLFMSSTPHTP---GKDPYSFARTLTILELEDFVTGKRFAIANAHVAF 202

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
           G+  +            RF+     ++    P+I   D N  P   D      ++ D   
Sbjct: 203 GSIDSRDY-------SVRFMASHISKMAKRLPVIITADLNTFPHRQDIKKFPAYDGDYLH 255

Query: 176 TLEVRQSFQKLQNMGF-----TDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230
            L         QN          +     D       +D    S +   G+ +DH+ +  
Sbjct: 256 RLLTSAGLLNAQNTSLLGFLGPLSTYTNDDGETKKGGFDNRFLS-TGTPGVFLDHVYVGG 314

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
             T LLH+  I+        PSDH PVIV L
Sbjct: 315 GITVLLHA--IEPAKVDQQFPSDHLPVIVDL 343


>gi|262382996|ref|ZP_06076133.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|262295874|gb|EEY83805.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
          Length = 280

 Score = 44.4 bits (103), Expect = 0.016,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 19/39 (48%), Gaps = 2/39 (5%)

Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
           RID+I ++      ++      + +    PSDH P+++ 
Sbjct: 241 RIDYIFVTKNI--HVNKYGTLNEFQYGHYPSDHFPIMIE 277


>gi|260170324|ref|ZP_05756736.1| Endonuclease/exonuclease/phosphatase [Bacteroides sp. D2]
          Length = 297

 Score = 44.4 bits (103), Expect = 0.016,   Method: Composition-based stats.
 Identities = 32/265 (12%), Positives = 69/265 (26%), Gaps = 25/265 (9%)

Query: 4   VTVATWNVN-----SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           + VAT+N+          R   +A  IK+ + +I   +E     +   +   Q  + +  
Sbjct: 53  MRVATYNLQVETGTGWTNRRERVAQLIKDYDFEICGFEE--ASWEQRSYLGTQLASDYQI 110

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
               +        +      +        LD    +   T  I +      N        
Sbjct: 111 LAYGRDTGNDDNKAGEMSGILYKKSRYTLLDAGRFWFSETPDIPSNGWDETNFKRFCVWG 170

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
                   K  ++       +         +     +   + +         N      E
Sbjct: 171 KFKDSKTQKEFYLFETHMPLADNARKHACQMLVDAVSDKAKDNTPAFCTGDFNATPDAPE 230

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           +         +       A      L++F              RID I +          
Sbjct: 231 IAT-TICQSGILKDAYREAAVQHGALFTFPSKKT---------RIDFIFV--------KH 272

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263
           A + +     +  SDH P+++ ++I
Sbjct: 273 ATVLSTRTIVSSLSDHYPMVIVVEI 297


>gi|57640238|ref|YP_182716.1| membrane-bound metal-dependent hydrolase [Thermococcus kodakarensis
           KOD1]
 gi|57158562|dbj|BAD84492.1| membrane-bound metal-dependent hydrolase [Thermococcus kodakarensis
           KOD1]
          Length = 583

 Score = 44.4 bits (103), Expect = 0.016,   Method: Composition-based stats.
 Identities = 37/249 (14%), Positives = 64/249 (25%), Gaps = 52/249 (20%)

Query: 21  LAAWIKENNPDIICLQET--KTED---KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75
           L   ++E+ PDII  QE          ++ P      L Y  E                 
Sbjct: 382 LVKLLREHEPDIIASQEVVGGMIANGYQDVPLMLSAYLGYAYEYKPAVE----GTYGIAI 437

Query: 76  PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135
                 +  G+              +  + L I  + +  G          +        
Sbjct: 438 FSHWRMNTEGELNLKSVGQARPAQKVMIEELGITLVNVHMGLSEEERAMQAEELLSFAES 497

Query: 136 RFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAI 195
             A+         +  GD N  P             DA                      
Sbjct: 498 EPAAH--------VILGDTNAEPDEKAIQIITQEYKDAF--------------------- 528

Query: 196 RATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHT 255
               +    Y+F   + D   +N    ID+I+L     + +       +     + SDH 
Sbjct: 529 ----EERPPYTF--NWGDIDIEN----IDYILLRRGWPAKVKDYGCLCEV----EVSDHR 574

Query: 256 PVIVSLDIP 264
           PV   +++P
Sbjct: 575 PVWALIELP 583


>gi|116206178|ref|XP_001228898.1| hypothetical protein CHGG_02382 [Chaetomium globosum CBS 148.51]
 gi|88182979|gb|EAQ90447.1| hypothetical protein CHGG_02382 [Chaetomium globosum CBS 148.51]
          Length = 1236

 Score = 44.4 bits (103), Expect = 0.016,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 18/55 (32%), Gaps = 4/55 (7%)

Query: 219 KGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDS 273
            G  ID ++ S E    +    +     G    SDH  +    DI  P     D 
Sbjct: 286 YGSTIDLVLASEELAEAVIRCGVHRTEHG----SDHRAIETVFDIEVPVPTHHDR 336


>gi|322391715|ref|ZP_08065182.1| RgfB protein [Streptococcus peroris ATCC 700780]
 gi|321145425|gb|EFX40819.1| RgfB protein [Streptococcus peroris ATCC 700780]
          Length = 272

 Score = 44.4 bits (103), Expect = 0.016,   Method: Composition-based stats.
 Identities = 37/278 (13%), Positives = 84/278 (30%), Gaps = 26/278 (9%)

Query: 4   VTVATWNVNSIRARIHN--------LAAWIKENNPDIICLQE-----TKTEDKN----FP 46
           +   T N +S    +          L   I ENN D+IC QE     T ++       FP
Sbjct: 1   MKFLTLNTHS---WMEKNPEEKFQLLLQDIFENNYDLICFQEINQEITSSQVDAGPFYFP 57

Query: 47  FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
             + + +  H +   +     +A            +  G D   +   I +   I  + +
Sbjct: 58  LPSAEPI--HQDHYVRLLVEQLAEKGLKYYWTWAYNHIGYDRYHEGVAILSKTPIEAREI 115

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG-DYNIIPQPHDCYN 165
            + ++  P           + +   K     +       +        +  + +  +   
Sbjct: 116 LVSDVDDPTDYHTRRVALAETVVEGKELAVASVHLSWWGKGFQEEWARFEAVLKELNKPL 175

Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225
            +  + +     E  Q+      +   DA     +    Y+           ++ +RID+
Sbjct: 176 LLAGDFNNPAGQEGYQAILASP-LELQDAFEVAKERRGSYTVPPEIDGWKGNSEPLRIDY 234

Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +  + +    + S  +    +   + SDH  +   L  
Sbjct: 235 VFTTKDI--QIESLHVVFDGKQNPQVSDHYGLQAELSW 270


>gi|229089031|ref|ZP_04220388.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-44]
 gi|228694283|gb|EEL47902.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-44]
          Length = 353

 Score = 44.4 bits (103), Expect = 0.016,   Method: Composition-based stats.
 Identities = 44/273 (16%), Positives = 88/273 (32%), Gaps = 41/273 (15%)

Query: 18  IHNLAAWIKENNPDIICLQETKTEDKNF------PFETLQS--------LNYHIETCGQK 63
           I N+ +++++ + D I +QE   ++K+        ++  Q           Y+       
Sbjct: 94  IGNMVSFLQKEDSDFILVQE--MDEKSLRSFDVNEYKAFQDGLKGFASTFGYNFNAQWVP 151

Query: 64  ---------SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
                    + +G+   SKY+  E+  +          +  E    I    + + N    
Sbjct: 152 VPIKKPHGYTKSGLGSFSKYKVEEVTRYQLPGREMWLRQLFELDRAIVEHKIPVDNGKYL 211

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
               +  + YD   S  K+ + F  + +         GDY ++    +     +   D  
Sbjct: 212 RMVNVHLSAYDKGGSIRKQQVEFLKEYMNKHYKN---GDYIVLGGDWNQLLSDVQLQDPK 268

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG----IRIDHIMLSP 230
           F  E  +   +L         +   D     S W    +  S  +G      ID  ++SP
Sbjct: 269 FKEEWPEWLVQLPEDFTDGGFQWAVDD----SVWTVRDNVKSYVEGENFVTIIDGFLVSP 324

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                +    +      +   SDH PV   L +
Sbjct: 325 N----VEIVSVQGHDLKFEN-SDHNPVSTVLKL 352


>gi|313125896|ref|YP_004036166.1| metal-dependent hydrolase [Halogeometricum borinquense DSM 11551]
 gi|312292261|gb|ADQ66721.1| metal-dependent hydrolase [Halogeometricum borinquense DSM 11551]
          Length = 283

 Score = 44.4 bits (103), Expect = 0.017,   Method: Composition-based stats.
 Identities = 39/280 (13%), Positives = 71/280 (25%), Gaps = 43/280 (15%)

Query: 4   VTVATWNV------NSIRA---RIHNLAAWIKENNPDIICLQE-TKTEDKNFPFETLQSL 53
           V V ++NV      +   A   R  +    ++ + PD++CLQE  K +   F  + L   
Sbjct: 20  VRVLSFNVRYDTDDDGPDAWPHRRDDAVRLVRYHRPDVVCLQEPLKHQLDAF-RDGLDEY 78

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
            + +           A  SK       T          +RF             +     
Sbjct: 79  EW-VAVPRTGGNAADATDSKETDDAASTGESVPVGYDASRFSLEDSET----FWLSETPE 133

Query: 114 PHGNPITSTKYDDK------ISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167
             G+                          AS  L+ +          +        +  
Sbjct: 134 EPGSVGWDATLPRILTRATLQGESGETFHVASVHLDNDGVKARLEGAKLARDRLAQLDGP 193

Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227
           +     C        ++ +          A H  H      +     ++ +   RID++ 
Sbjct: 194 VILAGDCNATPDSDPYEAVTEAFADARHVAKHGHHGP----EKTMHHFTGDPTERIDYVF 249

Query: 228 L-------SPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
           +       S                     PSDH PV+  
Sbjct: 250 VRECDVRLSATLADRTREGY----------PSDHFPVVAD 279


>gi|225557534|gb|EEH05820.1| inositol phosphosphingolipids phospholipase C [Ajellomyces
           capsulatus G186AR]
          Length = 473

 Score = 44.4 bits (103), Expect = 0.017,   Method: Composition-based stats.
 Identities = 50/346 (14%), Positives = 88/346 (25%), Gaps = 66/346 (19%)

Query: 2   SVVTVATWNVNSIRA----RIHNLAAW-----IKENNPDIICLQETKTEDK--NFPFETL 50
           + + V T N   ++     R   L        + EN P I+ LQE  + +   N   ET 
Sbjct: 11  AKINVLTLNCWGLKYISEYRRERLIEIGKRIALSENTPHIVGLQECWSREDYHNIRRETR 70

Query: 51  QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ---TLR 107
           + L Y           G+AILSK+   E   H    +    A F    +         +R
Sbjct: 71  EILPYGKFYFSGIFGGGLAILSKWPIEESTMHAYPLNGRPSAIFRGDWYVGKGVACARIR 130

Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP--------- 158
           IG       +   +  +       +            E   +                  
Sbjct: 131 IGPAAADIVDVFCTHLHAPYEREPRDSYICHRTAQAWEIAKLMKAAAEKGHLVVGLGDFN 190

Query: 159 -----------------QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT 201
                            +    +        A          + + +  F  +       
Sbjct: 191 MLPQSFAHRLITSHAPVKDVWGHLHPDSSIGAAIDSAEMSRKKPVPSADFNISENGATCD 250

Query: 202 HHLYSF-WDYYADSWSKNKG-------------IRIDHIMLSPEATSLLHS--------- 238
             L ++ W        K +G              R+D+I +   + S   S         
Sbjct: 251 SILNTWRWSKSQQKRLKREGPMPVDGQRPDPLAKRLDYIFVGDGSFSNFSSLRKWDIESA 310

Query: 239 --ARIDTKPRGWTKPSDHTPVIVSLDIP-EPRKKQQDSTSQNMKPI 281
               ++  P      SDH  V  ++ +         D    +  PI
Sbjct: 311 RVCMLERHPHLHCSLSDHFGVEATIKLDIAKEADDGDEGPSSFLPI 356


>gi|126653851|ref|ZP_01725711.1| endonuclease/exonuclease/phosphatase family protein [Bacillus sp.
            B14905]
 gi|126589639|gb|EAZ83777.1| endonuclease/exonuclease/phosphatase family protein [Bacillus sp.
            B14905]
          Length = 1502

 Score = 44.4 bits (103), Expect = 0.017,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 28/81 (34%), Gaps = 12/81 (14%)

Query: 187  QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT--- 243
                    +    D    Y++  Y  +S        +DHI++S    +      I     
Sbjct: 983  HEGQLMTNMINKVDDSDRYTYV-YQGNSQV------LDHILVSNNLVNK-TEIDILHINA 1034

Query: 244  KPRGWT-KPSDHTPVIVSLDI 263
                   + SDH PV+V +D+
Sbjct: 1035 DFTDMAGRASDHDPVMVQIDL 1055


>gi|284039823|ref|YP_003389753.1| endonuclease/exonuclease/phosphatase [Spirosoma linguale DSM 74]
 gi|283819116|gb|ADB40954.1| Endonuclease/exonuclease/phosphatase [Spirosoma linguale DSM 74]
          Length = 266

 Score = 44.4 bits (103), Expect = 0.017,   Method: Composition-based stats.
 Identities = 34/267 (12%), Positives = 70/267 (26%), Gaps = 40/267 (14%)

Query: 4   VTVATWNVN-------SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56
           + V T+N++         +  +  +A  I    PD++ LQE     +             
Sbjct: 32  LKVMTYNIHHCNPPSAGSKIDVEAIARVITAEKPDLVALQEVDVNTE------------- 78

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
             +    +                  +     D     +     +++    +       G
Sbjct: 79  -RSGKGLNQAKELARLTGMNFFFSKAIDHQGGDYGVAVLSRFPILDSTRFILPIDPTIGG 137

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
              T      + +  KR +  ++     E   +   +  I          I+  +    T
Sbjct: 138 ETRTIAAITVEPTKGKRMIFASTHLDLKEPNRLTQSELIIRHFGATDLPVILAGDFNAQT 197

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
                       +    +   T                  KN    ID +M+    +   
Sbjct: 198 DSKVIQLFDQTFVRSCQSCAPTIPV---------------KNPNRAIDFVMVKQGGSLKS 242

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263
            S R+  +       SDH PV+V L +
Sbjct: 243 TSTRVVDE----QYASDHLPVVVELKL 265


>gi|149031529|gb|EDL86496.1| similar to putative TRAF and TNF receptor associated protein,
          isoform CRA_a [Rattus norvegicus]
          Length = 305

 Score = 44.4 bits (103), Expect = 0.017,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 9/44 (20%)

Query: 2  SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQET 38
          S ++  TWN++ +       RAR   + + +   +PD++ LQE 
Sbjct: 57 STISFITWNIDGLDGCNLPERAR--GVCSCLALYSPDVVFLQEV 98


>gi|110640994|ref|YP_668722.1| hypothetical protein ECP_0804 [Escherichia coli 536]
 gi|191174511|ref|ZP_03036010.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli F11]
 gi|300992083|ref|ZP_07179785.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 200-1]
 gi|110342586|gb|ABG68823.1| hypothetical protein YbhP [Escherichia coli 536]
 gi|190905224|gb|EDV64864.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli F11]
 gi|300305412|gb|EFJ59932.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 200-1]
 gi|324011114|gb|EGB80333.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 60-1]
          Length = 253

 Score = 44.4 bits (103), Expect = 0.017,   Method: Composition-based stats.
 Identities = 34/267 (12%), Positives = 65/267 (24%), Gaps = 32/267 (11%)

Query: 5   TVATWNVN-SI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN--YH 56
            V T N++        R  +  L   ++  + DI+CLQE            +++     H
Sbjct: 11  KVLTINIHKGFTAFNRRFILPELRDAVRTVSADIVCLQEV-MGAHEVHPLHVENWPDTSH 69

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
            E      ++  A       +E               +     +++    R         
Sbjct: 70  YEFLADTMWSDFAYGRNAVYLEGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVP 129

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
                  +   +    R     +Q   L E +    D   +    D  +     N     
Sbjct: 130 PMTGKAIHVMCVHLGLREAHRQAQLAMLAEWVNELPDGEPVLVAGDFNDWRQKANHPLKV 189

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
                      +                                +R+D I +     +  
Sbjct: 190 QAGLDEIFTRAHGRPARTFPVQFPL-------------------LRLDRIYV----KNAS 226

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263
            SA      R W   SDH P+   + +
Sbjct: 227 ASAPTALPLRTWRHLSDHAPLSAEIHL 253


>gi|182624597|ref|ZP_02952379.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens D str. JGS1721]
 gi|177910201|gb|EDT72589.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           perfringens D str. JGS1721]
          Length = 263

 Score = 44.4 bits (103), Expect = 0.017,   Method: Composition-based stats.
 Identities = 38/269 (14%), Positives = 77/269 (28%), Gaps = 20/269 (7%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQE----TKTEDKNFPFETLQSLN 54
           + + T N +S        +I  LA  I E   D+I LQE     K   K      L+  N
Sbjct: 1   MKLLTLNCHSWLEEEQLYKIKYLAKTIVEEKYDVIALQEASQSIKASVK---EGNLKEDN 57

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           Y +    + +        +Y  +   +H+  D  +     +     +N+++  I   +  
Sbjct: 58  YGLVLIEEINK---LGGEEYHLVWDYSHIGYDIYEEGLCILTKHKIVNSESFYISKSHSK 114

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
                            +    ++       +              H   +         
Sbjct: 115 TFWRSRKIVKATIDIKNENIDFYSCHMGWWHDKEESFTFQVENLLAHAKESKNRAFFMGD 174

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD--SWSKNKG-IRIDHIMLSPE 231
           F        +    +     I       +  S      +   W  N G +RID I  +  
Sbjct: 175 FNNNAFLKNEGYDFLKSNGLIDTYDLAENKDSGVTVNKNIAGWEDNTGELRIDIIFTNRN 234

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
             + ++ +R+    +     SDH  + + 
Sbjct: 235 --TKVYDSRVIFNGKNKEVVSDHFGLEIE 261


>gi|238878752|gb|EEQ42390.1| conserved hypothetical protein [Candida albicans WO-1]
          Length = 785

 Score = 44.4 bits (103), Expect = 0.017,   Method: Composition-based stats.
 Identities = 39/301 (12%), Positives = 74/301 (24%), Gaps = 53/301 (17%)

Query: 17  RIHNLAAWIKENNPDIICLQE--TKT-EDKNFPFETLQSL-NYHI--------------- 57
           R + L   +   N DI+C+QE  TKT ++   P  T      Y                 
Sbjct: 485 RKNLLEKEVLNYNTDIVCMQEVETKTFQEFWLPVMTANGYKGYFFSKTRSKTMSETDSKK 544

Query: 58  ---------------ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN 102
                                 YN V + S              + D  A         +
Sbjct: 545 VDGCATFFKNDKFSLVHKQNFEYNSVCMGSDKYKKTKDLFNRFMNKDNIALISYLQHKES 604

Query: 103 TQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD 162
            + + + N +L         K       ++       +               ++    +
Sbjct: 605 GEKIAVVNTHLHWDPAFNDVKALQVGILLEELQGIIKKYRHTNSNEDIKNSSIVVCGDFN 664

Query: 163 CYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF-------WDYYADSW 215
                                   ++ G        H      ++       +     ++
Sbjct: 665 SVKDSAVYQLFSTGASKGHEDMNGRDYGKFTEDGFHHPFKLKSAYEAVGELPFTNLTPAF 724

Query: 216 SKNKGIRIDHIMLS-PEATSLLHSARIDTKPRG-------WTKPSDHTPVIVSLDIPEPR 267
           + N    ID+I  S P         R+D +             PSDH P++    + + +
Sbjct: 725 TDN----IDYIWYSTPTLQVKGLLGRVDEEYTSHSIGFPDANFPSDHVPILAKFQLKKGK 780

Query: 268 K 268
           K
Sbjct: 781 K 781


>gi|283798597|ref|ZP_06347750.1| exodeoxyribonuclease III [Clostridium sp. M62/1]
 gi|291073681|gb|EFE11045.1| exodeoxyribonuclease III [Clostridium sp. M62/1]
          Length = 324

 Score = 44.4 bits (103), Expect = 0.017,   Method: Composition-based stats.
 Identities = 33/293 (11%), Positives = 71/293 (24%), Gaps = 39/293 (13%)

Query: 4   VTVATWNVNSIRAR-----IHNLAAWIKENNPDIICLQETK--TEDKNFPFETLQSLNYH 56
           + + T N +S+  R     +      I +  PD+I LQE     + +    E L+   + 
Sbjct: 1   MKLLTLNTHSLEERDYEKKLKIFTEEILKEKPDVIALQEVNQPLDGEEADGEVLKKSGFI 60

Query: 57  -IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
              +        V + +       +    G  +       +  +    + + + +     
Sbjct: 61  PCPSEPPSCAVPVRLGNHGLRAAQLLRRSGFPVFWTWTSAKVGYGKYDEGMALMSRRPIA 120

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
                        +  K     A      +     +  +              +      
Sbjct: 121 EVSQLFLTDGRDYNNWKTRKALAITLNIGKGEEPVS--FVTAHMGWWKDEEEPFSRQWER 178

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHL-Y-----SFWD--YYADSWSKN--------- 218
                 S ++  ++                Y     S W   Y A               
Sbjct: 179 LDAFASSLRRRADVWLMGDFNTQDSVRGEGYDRITASGWTDAYRAAGKRDGGITVPGAID 238

Query: 219 --------KGIRIDHIMLSP--EATSLLHSARID-TKPRGWTKPSDHTPVIVS 260
                    G+RID+I      ++        +   + R     SD  PV+  
Sbjct: 239 GWREDGEVPGMRIDYIWYGRKHDSGDRKSRGDVLIEEVRTVFNGSD-CPVVSD 290


>gi|167581698|ref|ZP_02374572.1| endonuclease/exonuclease/phosphatase family superfamily protein
           [Burkholderia thailandensis TXDOH]
          Length = 135

 Score = 44.4 bits (103), Expect = 0.017,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 17/38 (44%), Gaps = 4/38 (10%)

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           D   ++      +    ID    G T+ SDH P+++ L
Sbjct: 99  DFAFVTDTLAYRISRCEID----GATRASDHQPIVLEL 132


>gi|324517012|gb|ADY46703.1| Unknown [Ascaris suum]
          Length = 323

 Score = 44.4 bits (103), Expect = 0.017,   Method: Composition-based stats.
 Identities = 48/304 (15%), Positives = 85/304 (27%), Gaps = 47/304 (15%)

Query: 1   MSVVTVATW----NV-NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN- 54
            +V+T  TW    NV N +     +    I    PDI+ LQE   E++    + ++ L  
Sbjct: 27  FTVMTFNTWQSGKNVENGLFKVAKH----ISYVYPDIVALQEI--ENETVIGQLIKMLGR 80

Query: 55  --------Y----------HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIE 96
                   Y          H       +    ++ +K         +    L +  R   
Sbjct: 81  RWSGVANNYSYPDTAILTRHPIINNSIATTARSVGAKILLPIHNRTVQIYSLHLDYRSYG 140

Query: 97  ATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYN- 155
                N        +     N   + ++++   +I       + +   EEPL+  GD+N 
Sbjct: 141 PYAANNKLVSYATQIMAGERNIDGNGRFENMREFILDDGFRRAVKRSKEEPLLVCGDFNA 200

Query: 156 IIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW 215
                       +           +    +         +          + W     + 
Sbjct: 201 PSHLDWTEETKDLHGGWVFDWPATKMLQGEAAMEDSFRKLHPNPLLKTGNT-WSTVEKTT 259

Query: 216 SKNKGI-------RIDHIMLSPEATSLLHSA------RIDTKPRGW--TKPSDHTPVIVS 260
           S   G        RID I         ++S        +  KP  W    PSDH  V+  
Sbjct: 260 SAGWGWTIPEPQDRIDFIFYKSPLLEPINSYTYQGRDVVWPKPYHWHNDYPSDHFAVVTK 319

Query: 261 LDIP 264
             I 
Sbjct: 320 FTIS 323


>gi|187607433|ref|NP_001120209.1| sphingomyelin phosphodiesterase 2, neutral membrane (neutral
           sphingomyelinase) [Xenopus (Silurana) tropicalis]
 gi|166796474|gb|AAI59354.1| LOC100145256 protein [Xenopus (Silurana) tropicalis]
          Length = 395

 Score = 44.4 bits (103), Expect = 0.017,   Method: Composition-based stats.
 Identities = 38/267 (14%), Positives = 72/267 (26%), Gaps = 27/267 (10%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDK--NFPFETLQSLNYHIETCGQKSYNGVAILSKY 74
           R+  +   + +   D+  LQE  ++               Y          +G+ + S++
Sbjct: 29  RLALIGQLLSQQCYDLALLQEIWSDKDYSELRHRLSDVFPYTHRFKSGVIGSGLCVFSQF 88

Query: 75  QPIEI----------VTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124
             I+              +   D                    +   +L       +  Y
Sbjct: 89  PIIDCLQYQFSLNGFPYMMNHGDWFCGKAVGLVKLKAYGFLCHVYVTHLHAEYCRENDCY 148

Query: 125 D-DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
              +I       +F        + ++ AGD N+ P          W       LE  +  
Sbjct: 149 RSHRILQSWELAQFIRHTSNNSDVVVLAGDLNMHPGDLGVKLVREWTGLKDSYLECTEYE 208

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM--LSPEATSLLHSARI 241
                     +   T               ++   +GIRID+IM   +P           
Sbjct: 209 GPPDGCTLIPSNPFTDPQEL---------KNFP--QGIRIDYIMYKSAPGIAVSCQQVTT 257

Query: 242 DTKP-RGWTKPSDHTPVIVSLDIPEPR 267
            ++  R  T  SDH  V  +L +    
Sbjct: 258 GSQSSRSDTPFSDHEIVTATLRLQRIP 284


>gi|261332364|emb|CBH15359.1| RNA editing 3' exouridylylase MP99 [Trypanosoma brucei gambiense
           DAL972]
          Length = 929

 Score = 44.4 bits (103), Expect = 0.017,   Method: Composition-based stats.
 Identities = 39/303 (12%), Positives = 68/303 (22%), Gaps = 56/303 (18%)

Query: 2   SVVTVATWNV--------------NSI----RARIHNLAAWIKENNPDIICLQETKTEDK 43
           S + V TWNV              + I      R   LA  ++  + D+I +QE      
Sbjct: 637 STLRVVTWNVQFSRHSGERTPLGRDGIDWCTSTRYVALAQTLEGLDADVIGMQEV----- 691

Query: 44  NFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
                   +   ++               ++        +                 +  
Sbjct: 692 ------EPAWCKYLSQQPWVREKYAMTCCEHSHAIQPWGVMLLVRRSLCVTSTHHANVPA 745

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
            +     +                   +       +      +           P  +  
Sbjct: 746 FSGHTSVMPEVTVVVSEGVPVTVGSMHLLAPYNQNNISNRTTQLDNLTKRLRTRPPINGK 805

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYS---------FWDYYADS 214
              +I   D  F    +  F     MGF DA    H    + S            Y A  
Sbjct: 806 QAGLIVMGD--FNDCAKNYFTFPPEMGFKDAWLLLHPDEGVSSKSGHTIDGDRNPYAAQI 863

Query: 215 WSKNKGIRIDHIMLSPEATSLL----------------HSARIDTKPRGWTKPSDHTPVI 258
             K    R D ++ S      +                    ID     +  PSDH  ++
Sbjct: 864 IEKEFYGRADRVLFSSRNLQPIQTEIIGTTSVREMGITKQVDIDKDVPEYLYPSDHFGLL 923

Query: 259 VSL 261
           V  
Sbjct: 924 VEF 926


>gi|108797936|ref|YP_638133.1| endonuclease/exonuclease/phosphatase [Mycobacterium sp. MCS]
 gi|119867032|ref|YP_936984.1| endonuclease/exonuclease/phosphatase [Mycobacterium sp. KMS]
 gi|108768355|gb|ABG07077.1| Endonuclease/exonuclease/phosphatase [Mycobacterium sp. MCS]
 gi|119693121|gb|ABL90194.1| Endonuclease/exonuclease/phosphatase [Mycobacterium sp. KMS]
          Length = 255

 Score = 44.4 bits (103), Expect = 0.017,   Method: Composition-based stats.
 Identities = 33/266 (12%), Positives = 75/266 (28%), Gaps = 22/266 (8%)

Query: 4   VTVATWNV-NSIRAR------IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56
           + VAT+N+ +  R+       +  LA  I+E + DI+ LQE            L ++   
Sbjct: 1   MRVATFNILHG-RSVHDGEVDVDRLAQSIRELDADIVALQEVDLHQPRSGTTDLTAVAAE 59

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT-LRIGNLYLPH 115
                   +      +        T             + + F   T   +R+  + +P 
Sbjct: 60  AMRAVSHRFVAAIAGTPGATWMAATGREQPGTAAYGIALLSRFPAETWQVVRLPRIPVPF 119

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
              +        ++   R     +    L    +     + +P  +      +  +   F
Sbjct: 120 PMYLPGPNRVQIVNEEPRAAMVGTFDTPLGPLTVANTHLSFVPGWNRVQMRHLVRDLRGF 179

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
                       +                 +F   +A          +DH++ + +    
Sbjct: 180 EGPRMLLGDLNMSPPTPARWARMRSLGEGLTF-PAHAPDRQ------LDHVL-TDDPRLR 231

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
           +      + P      SDH  ++V +
Sbjct: 232 VEKCSAVSLP-----ISDHRALVVDI 252


>gi|29293904|gb|AAO63566.1| RNA editing complex protein MP99 [Trypanosoma brucei]
          Length = 907

 Score = 44.4 bits (103), Expect = 0.017,   Method: Composition-based stats.
 Identities = 39/303 (12%), Positives = 68/303 (22%), Gaps = 56/303 (18%)

Query: 2   SVVTVATWNV--------------NSI----RARIHNLAAWIKENNPDIICLQETKTEDK 43
           S + V TWNV              + I      R   LA  ++  + D+I +QE      
Sbjct: 615 STLRVVTWNVQFSRHSGERTPLGRDGIDWCTSTRYVALAQTLEGLDADVIGMQEV----- 669

Query: 44  NFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
                   +   ++               ++        +                 +  
Sbjct: 670 ------EPAWCKYLSQQPWVREKYAMTCCEHSHAIQPWGVMLLVRRSLCVTSTHHANVPA 723

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
            +     +                   +       +      +           P  +  
Sbjct: 724 FSGHTSVMPEVTVVVSEGVPVTVGSMHLLAPYNQNNISNRTTQLDNLTKRLRTRPPINGK 783

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYS---------FWDYYADS 214
              +I   D  F    +  F     MGF DA    H    + S            Y A  
Sbjct: 784 QAGLIVMGD--FNDCAKNYFTFPPEMGFKDAWLLLHPDEGVSSKSGHTIDGDRNPYAAQI 841

Query: 215 WSKNKGIRIDHIMLSPEATSLL----------------HSARIDTKPRGWTKPSDHTPVI 258
             K    R D ++ S      +                    ID     +  PSDH  ++
Sbjct: 842 IEKEFYGRADRVLFSSRNLQPIQTEIIGTTSVREMGITKQVDIDKDVPEYLYPSDHFGLL 901

Query: 259 VSL 261
           V  
Sbjct: 902 VEF 904


>gi|34392550|dbj|BAC82603.1| pol-like protein [Takifugu rubripes]
          Length = 1234

 Score = 44.4 bits (103), Expect = 0.017,   Method: Composition-based stats.
 Identities = 29/230 (12%), Positives = 54/230 (23%), Gaps = 22/230 (9%)

Query: 1   MSVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           M    V T N+N  R       +    K    D++ LQET +   N      +     + 
Sbjct: 1   MHTFRVGTLNINGARDERKRALVFDTTKIKRVDVMFLQETHSNRNNEADWEKEWEGQALL 60

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
           +       GV +L           +                  +   + I          
Sbjct: 61  SHNTTLSGGVGLLFSRGFTPSSLEVEHVVRGRCLMVKARLQNHSLVFINIYA-----PTN 115

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
            T  +   K                + +        +         + +     A     
Sbjct: 116 GTEKELSRKKVGTVLNGCGDDLLFLVGDFNCTESFLDRDHADPHLASFLSLTETA----- 170

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
                    + G  D  R  H     Y+++     S  +    R+D  +L
Sbjct: 171 -------GYSHGLVDVWRRMHTDSRQYTWF---RLSEDRISSARLDRFLL 210


>gi|71747102|ref|XP_822606.1| RNA editing 3' exouridylylase MP99 [Trypanosoma brucei TREU927]
 gi|70832274|gb|EAN77778.1| RNA editing 3' exouridylylase MP99 [Trypanosoma brucei]
          Length = 907

 Score = 44.4 bits (103), Expect = 0.017,   Method: Composition-based stats.
 Identities = 39/303 (12%), Positives = 68/303 (22%), Gaps = 56/303 (18%)

Query: 2   SVVTVATWNV--------------NSI----RARIHNLAAWIKENNPDIICLQETKTEDK 43
           S + V TWNV              + I      R   LA  ++  + D+I +QE      
Sbjct: 615 STLRVVTWNVQFSRHSGERTPLGRDGIDWCTSTRYVALAQTLEGLDADVIGMQEV----- 669

Query: 44  NFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
                   +   ++               ++        +                 +  
Sbjct: 670 ------EPAWCKYLSQQPWVREKYAMTCCEHSHAIQPWGVMLLVRRSLCVTSTHHANVPA 723

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
            +     +                   +       +      +           P  +  
Sbjct: 724 FSGHTSVMPEVTVVVSEGVPVTVGSMHLLAPYNQNNISNRTTQLDNLTKRLRTRPPINGK 783

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYS---------FWDYYADS 214
              +I   D  F    +  F     MGF DA    H    + S            Y A  
Sbjct: 784 QAGLIVMGD--FNDCAKNYFTFPPEMGFKDAWLLLHPDEGVSSKSGHTIDGDRNPYAAQI 841

Query: 215 WSKNKGIRIDHIMLSPEATSLL----------------HSARIDTKPRGWTKPSDHTPVI 258
             K    R D ++ S      +                    ID     +  PSDH  ++
Sbjct: 842 IEKEFYGRADRVLFSSRNLQPIQTEIIGTTSVREMGITKQVDIDKDVPEYLYPSDHFGLL 901

Query: 259 VSL 261
           V  
Sbjct: 902 VEF 904


>gi|221198087|ref|ZP_03571133.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans
           CGD2M]
 gi|221204354|ref|ZP_03577371.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans
           CGD2]
 gi|221175211|gb|EEE07641.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans
           CGD2]
 gi|221182019|gb|EEE14420.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans
           CGD2M]
          Length = 285

 Score = 44.4 bits (103), Expect = 0.018,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 4/38 (10%)

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           D   ++      L    ID    G  + SDH P+++ L
Sbjct: 250 DFAFVTDTLLPRLARCEID----GAVRASDHQPIVLEL 283


>gi|221212763|ref|ZP_03585739.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans
           CGD1]
 gi|221166976|gb|EED99446.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans
           CGD1]
          Length = 285

 Score = 44.4 bits (103), Expect = 0.018,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 4/38 (10%)

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           D   ++      L    ID    G  + SDH P+++ L
Sbjct: 250 DFAFVTDTLLPRLARCEID----GAVRASDHQPIVLEL 283


>gi|161524628|ref|YP_001579640.1| endonuclease/exonuclease/phosphatase [Burkholderia multivorans ATCC
           17616]
 gi|189350616|ref|YP_001946244.1| metal-dependent hydrolase [Burkholderia multivorans ATCC 17616]
 gi|160342057|gb|ABX15143.1| Endonuclease/exonuclease/phosphatase [Burkholderia multivorans ATCC
           17616]
 gi|189334638|dbj|BAG43708.1| metal-dependent hydrolase [Burkholderia multivorans ATCC 17616]
          Length = 285

 Score = 44.4 bits (103), Expect = 0.018,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 4/38 (10%)

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           D   ++      L    ID    G  + SDH P+++ L
Sbjct: 250 DFAFVTDTLLPRLARCEID----GAVRASDHQPIVLEL 283


>gi|149041026|gb|EDL94983.1| angel homolog 2 (Drosophila) (predicted), isoform CRA_b [Rattus
           norvegicus]
          Length = 359

 Score = 44.4 bits (103), Expect = 0.018,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 32/97 (32%), Gaps = 5/97 (5%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73
           R  N+   IK  + D++CLQE   ++ ++  E    L+SL YH E   +           
Sbjct: 178 RFPNILKEIKHFDADVLCLQEV--QEDHYGTEIRPSLESLGYHCEYKMKTGRKPDGCAIC 235

Query: 74  YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
           ++  +            +              L +  
Sbjct: 236 FKHSKFSLLSVNPVEFCRRDIPLLDRDNIGLVLLLQP 272


>gi|146421647|ref|XP_001486768.1| hypothetical protein PGUG_00145 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 497

 Score = 44.4 bits (103), Expect = 0.018,   Method: Composition-based stats.
 Identities = 41/313 (13%), Positives = 68/313 (21%), Gaps = 70/313 (22%)

Query: 3   VVTVATWNV-NSIRARI-HNLAAWIKENN---PDI---------ICLQET-KTEDKNF-- 45
              + + NV N  R  +     +W+K        I         + LQE  K +  +   
Sbjct: 196 TFRIYSHNVRNGGRDILDPGEESWLKRYRKITASIKFNSQLNTVVALQEVYKFQLDDIMR 255

Query: 46  -------PFE-TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA 97
                  P E   ++         Q       +    +   +       + D     +E 
Sbjct: 256 DLNRYSPPEEPEWEAYGVGRIDGDQLGEFVPILFKTSEWEMVFYDSIWLNEDNPRMALEG 315

Query: 98  TFTINTQTLRIGNLYLPHGNPITSTKYDDKIS-----WIKRFLRFASQRLELEEPLIFAG 152
                 + +    L    GN I                    +         + P    G
Sbjct: 316 WDAKYLRIVSYVTLKHVSGNYINVFNTHLDHMGELSKQGLAQIILDKMNSINQWPSFLCG 375

Query: 153 DYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYA 212
           D N  P             +                        A +   H  S    + 
Sbjct: 376 DLNTEPNEKAYQIITEQFRN------------------LAKLTTAFNKYGHSKSTVTGFE 417

Query: 213 DSWSKNKGIRIDHIML------------------SPE----ATSLLHSARIDTKPRGWTK 250
                N G  ID+I                    SP         L S  +         
Sbjct: 418 GEVLLNGGQNIDYIFAPSYTAKLGETVLCDKLTTSPPSERYLDLRLKSFGMLHSKFNGLY 477

Query: 251 PSDHTPVIVSLDI 263
            SDH P++    +
Sbjct: 478 MSDHRPIVADFTL 490


>gi|116317784|emb|CAH65761.1| H0215A08.3 [Oryza sativa Indica Group]
          Length = 1186

 Score = 44.4 bits (103), Expect = 0.018,   Method: Composition-based stats.
 Identities = 37/259 (14%), Positives = 77/259 (29%), Gaps = 43/259 (16%)

Query: 9   WNVNSIRARIHN--LAAWIKENNPDIICLQETKTED------KNFPFETLQSLNYHIETC 60
           WNV  +  R H   + + + +    + CLQETK +D        F    L    Y     
Sbjct: 11  WNVRGLNDRAHRADVRSVVTDARCSVACLQETKLDDIPVTLAAQFLSANLSDFLY----- 65

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
              +      +       + +       D            ++Q + +        + + 
Sbjct: 66  -LPADETRGGILLAWDQSVASCDSLSLGDFSLTARLQFVDGSSQWITVVYGPQAESDKLR 124

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
                               R     P + AGD+N+I Q  D  N  +            
Sbjct: 125 F------------LQELRDIRNARSGPWVVAGDFNLIYQDQDKNNANLNRR--------- 163

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
               + +      ++   H     +++    ++ W+     R+D I  + +   +     
Sbjct: 164 -MMGRYRRAINDLSLHELHLNGRSFTW----SNGWTNPTLERLDRIFYTSDWEDMFPQCF 218

Query: 241 IDTKPRGWTKPSDHTPVIV 259
           +   P   +  SDH P+++
Sbjct: 219 LMALP---STVSDHCPLLL 234


>gi|296420844|ref|XP_002839978.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295636186|emb|CAZ84169.1| unnamed protein product [Tuber melanosporum]
          Length = 493

 Score = 44.4 bits (103), Expect = 0.018,   Method: Composition-based stats.
 Identities = 57/321 (17%), Positives = 101/321 (31%), Gaps = 46/321 (14%)

Query: 4   VTVATWNVNSIR-------ARIHNLAAWIKENNP--DIICLQE--TKTEDKNFPFETLQS 52
           + V T N   ++       AR++ ++  I   +P  DI+ LQE     +  N   +T   
Sbjct: 16  IRVFTMNCWGLKYIAKHREARLNEVSLRIARASPSFDIVALQEFWVYADYGNLRTKTSSI 75

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTH-----------LPGDDLDVQARFIEATFTI 101
           L Y           G+ ILSK+   +                 GD    +     A    
Sbjct: 76  LPYGKFYFSGAIGGGLVILSKWPIEQSSMFGYPLNGRPTAFWRGDWYVGKGVACAAVRHP 135

Query: 102 NTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161
           + +T+ I N +L        +    + +      +     ++     I  GD+N+IP   
Sbjct: 136 SGKTIDIFNTHLHAPYEKNDSYLCHRTAQAWEIAKLLRGAVQKGHIAIGLGDFNMIPSSL 195

Query: 162 DCYNPIIWENDACFT----LEVRQSFQKLQNMGFTDAIRATHDTHHLYSF----WDYYAD 213
                      +                  N      +        L ++          
Sbjct: 196 AHRIISTHGLVSDSWLSANPTTPSITPPKTNAKTNIEVLGATCDSVLNTWRMSTPTLPPP 255

Query: 214 SWSKNKGIRIDHIMLSPEATSLLHSARI-DTKPRGWTK-------------PSDHTPVIV 259
                KG R+D+I  +P   S +   RI  T+P                   SDH  V V
Sbjct: 256 ETEDPKGKRLDYIFHAPR-YSSVQDIRIGMTEPMSMPSQKGGKGGAGGYCSLSDHFSVEV 314

Query: 260 SLDIPEPRKKQQDSTSQNMKP 280
           +L +  P ++QQ++ ++   P
Sbjct: 315 TLSL-APNQQQQNALAEARNP 334


>gi|312882993|ref|ZP_07742724.1| putative phospholipase C [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309369153|gb|EFP96674.1| putative phospholipase C [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 441

 Score = 44.4 bits (103), Expect = 0.018,   Method: Composition-based stats.
 Identities = 38/279 (13%), Positives = 76/279 (27%), Gaps = 41/279 (14%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKEN-----NPDIICLQETKTE-DKNFPFETLQSLNY 55
           + + V T+N+ ++     ++    +E        D++ LQE        F  E  +   Y
Sbjct: 176 NALKVMTYNIWALPVIAKHIGDRYQEIPKHVKGYDVLALQEVFAAGRGEFLRELAKEYPY 235

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
             +   +K  N             + +                         I       
Sbjct: 236 QTQMLDKKGPNIYDGGVTIVSRYPIVNQTQFVFPDCTGTDCFADKGVNYAEIIK------ 289

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
              +    +    +          ++ + ++    A   NI       Y      N    
Sbjct: 290 -GGVAYHVFATHTASYDTSTAREYRQRQFKQMRQLASTLNIPKNEAVIYGGDFNVNK--- 345

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYS--FWDYYADSWSKNKGIR--------IDH 225
                              + A   ++  Y+   +D   ++++    IR        +D+
Sbjct: 346 ------RKFPGDYQQMLSNLSAIEPSYSGYTESTFDPRVNNFAGK--IREDNGNVEYLDY 397

Query: 226 IMLSPEATSLLHSARIDTKPRG-----WTKP--SDHTPV 257
           +M+S E  +  HS      PR      W     SDH PV
Sbjct: 398 VMVSNEYLNKSHSDNRVDVPRSTSEGLWKHFNLSDHFPV 436


>gi|217969785|ref|YP_002355019.1| endonuclease/exonuclease/phosphatase [Thauera sp. MZ1T]
 gi|217507112|gb|ACK54123.1| Endonuclease/exonuclease/phosphatase [Thauera sp. MZ1T]
          Length = 301

 Score = 44.4 bits (103), Expect = 0.018,   Method: Composition-based stats.
 Identities = 8/38 (21%), Positives = 16/38 (42%), Gaps = 4/38 (10%)

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           D   ++ +    + +  +       T  SDH PV++ L
Sbjct: 266 DFFFVTADLAPRVRAVEVLAD----TAASDHQPVVLEL 299


>gi|94991267|ref|YP_599367.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pyogenes MGAS10270]
 gi|94544775|gb|ABF34823.1| Endonuclease/Exonuclease/phosphatase family protein [Streptococcus
           pyogenes MGAS10270]
          Length = 279

 Score = 44.4 bits (103), Expect = 0.018,   Method: Composition-based stats.
 Identities = 37/276 (13%), Positives = 85/276 (30%), Gaps = 20/276 (7%)

Query: 3   VVTVATWNVNSIRAR--IHNLAAW---IKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57
           +  V T N +S      +  L A    I     DIICLQE    ++    E    L  + 
Sbjct: 8   MTKVLTLNTHSWMQANTLKKLVALAEHILAEKYDIICLQEI---NQLIESELATDLPRYQ 64

Query: 58  E-----TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
                 +  +  +  + I    +  +        +      + E    ++ Q + + ++ 
Sbjct: 65  ALSGTPSIHKDHFALLLIHYLQKRGQHYYWSWASNHIGYDIYQEGVAILSKQPIHVSDIL 124

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLI---FAGDYNIIPQPHDCYNPIIW 169
           +      T       +             + +        F G++  + +     N  + 
Sbjct: 125 VSAMADETDYHTRRSLIAKTTLDGKEVAVVNVHLSWFDKGFLGEWEKLEKELLTLNCPLL 184

Query: 170 ENDACFTLEVRQSFQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227
                     +  +Q +    +   D+ +        +S            + +++DH+ 
Sbjct: 185 LMGDFNNPTDQDGYQVMMGSPLDLQDSHKVADHVFGDHSIVADIDGWQGNKEALKVDHVF 244

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            S +    + S++I  +       SDH  + V+LD 
Sbjct: 245 TSKDFI--IRSSKITFEGGDAPVVSDHYGLEVTLDW 278


>gi|290959609|ref|YP_003490791.1| hypothetical protein SCAB_52121 [Streptomyces scabiei 87.22]
 gi|260649135|emb|CBG72249.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
          Length = 295

 Score = 44.4 bits (103), Expect = 0.018,   Method: Composition-based stats.
 Identities = 45/280 (16%), Positives = 69/280 (24%), Gaps = 25/280 (8%)

Query: 4   VTVATWNVNSIR-----ARIHNLAAWIKENNPDIICLQETK----------TEDKNFPFE 48
           + V TWN+   R      R   + A ++E  PD + LQE                N    
Sbjct: 1   MRVVTWNLW-WRFGPWQERQKAILAVLRELRPDAVGLQEVWQRGGGTGRDGGGGDNLAGW 59

Query: 49  TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108
               L  H                    + I   +       +   I         T   
Sbjct: 60  LAGELGMHWAWGEYGDAGRWQRRIGDSDVGIGGAVLSRWPVRERDAIALPAGDGGSTRGA 119

Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168
               L               S          Q   L   +      +  P          
Sbjct: 120 LYALLDAPGAPVPFFTAHLSSATDASAVRCRQVTALAGFVARHRGGHAHPSVITGDFNAW 179

Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF---WDYYADSWSKNKGIRIDH 225
            ++D        ++   +    F DA           ++     Y A S+  +   R+D+
Sbjct: 180 PDSDEVRLFGGYRTAPAVPGQCFFDAWEYAEPGAPSATWDLANPYVAGSFGPSV--RVDY 237

Query: 226 IMLSPEATSLLHSARIDT----KPRGWTKPSDHTPVIVSL 261
           I + P     L   R        P G   PSDH  V+  L
Sbjct: 238 IHVGPPGPGGLGHVRAVRRAGEGPVGGVWPSDHLAVVADL 277


>gi|256838624|ref|ZP_05544134.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|256739543|gb|EEU52867.1| conserved hypothetical protein [Parabacteroides sp. D13]
          Length = 280

 Score = 44.4 bits (103), Expect = 0.018,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 19/39 (48%), Gaps = 2/39 (5%)

Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
           RID+I ++      ++      + +    PSDH P+++ 
Sbjct: 241 RIDYIFVTKNI--HVNKYGTLNEFQYGHYPSDHFPIMIE 277


>gi|196015334|ref|XP_002117524.1| hypothetical protein TRIADDRAFT_32656 [Trichoplax adhaerens]
 gi|190579846|gb|EDV19934.1| hypothetical protein TRIADDRAFT_32656 [Trichoplax adhaerens]
          Length = 627

 Score = 44.4 bits (103), Expect = 0.018,   Method: Composition-based stats.
 Identities = 41/294 (13%), Positives = 87/294 (29%), Gaps = 50/294 (17%)

Query: 8   TWNVNSIRARIHNLAAWIKENN--PDIICL--QE--------------------TKTEDK 43
           TWNVN  +    +++ W+++ +   DII +  QE                     K  DK
Sbjct: 7   TWNVNG-QLTSEDISEWLRKEDGNSDIIAIGFQELDLSAEALLQLKESSRAEEWVKIVDK 65

Query: 44  NFPFETLQSLNYHIETC---GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT 100
           + P +  +     +           N    +++     + T + G   +     +     
Sbjct: 66  HLPIDMCKVRGIRLVGMLLLVYAKSNLREFITEIHADHVGTGIMGMMGNKGGVAVRFKLH 125

Query: 101 INTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP 160
           + T    + +    H   I     D K     +    +SQ L + +        ++  + 
Sbjct: 126 LTTMCF-VNSHLAAHAEEIEKRNQDFKEVSS-KLFSRSSQPLSVLDHETTFWFGDLNYRI 183

Query: 161 HDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY--SF--------WDY 210
                 +     +    ++ +  Q  Q M      +   +    +  ++        WD 
Sbjct: 184 AGNEAIVKDMIKSGLLDDLFKFDQLNQQMSQRKVFQNFIEGPIKFIPTYKYDPGTNNWDT 243

Query: 211 YADSWSKNKGIRIDHIMLSPEATSLLHSA-RIDTKPRGWTKPSDHTPVIVSLDI 263
                +     RI              +   +D +     K SDH PV  S ++
Sbjct: 244 SEKCRAPAWCDRI---------LWKATNVLFVDYRSHPSLKCSDHKPVSASFNV 288


>gi|68476691|ref|XP_717638.1| potential mRNA deadenylase and CCR4-NOT complex subunit Ccr4p
           [Candida albicans SC5314]
 gi|68476838|ref|XP_717564.1| potential mRNA deadenylase and CCR4-NOT complex subunit Ccr4p
           [Candida albicans SC5314]
 gi|74586169|sp|Q5A761|CCR4_CANAL RecName: Full=Glucose-repressible alcohol dehydrogenase
           transcriptional effector; AltName: Full=Carbon
           catabolite repressor protein 4; AltName:
           Full=Cytoplasmic deadenylase
 gi|46439279|gb|EAK98599.1| potential mRNA deadenylase and  CCR4-NOT complex  subunit Ccr4p
           [Candida albicans SC5314]
 gi|46439356|gb|EAK98675.1| potential mRNA deadenylase and  CCR4-NOT complex  subunit Ccr4p
           [Candida albicans SC5314]
          Length = 787

 Score = 44.4 bits (103), Expect = 0.018,   Method: Composition-based stats.
 Identities = 39/301 (12%), Positives = 74/301 (24%), Gaps = 53/301 (17%)

Query: 17  RIHNLAAWIKENNPDIICLQE--TKT-EDKNFPFETLQSL-NYHI--------------- 57
           R + L   +   N DI+C+QE  TKT ++   P  T      Y                 
Sbjct: 487 RKNLLEKEVLNYNTDIVCMQEVETKTFQEFWLPVMTANGYKGYFFSKTRSKTMSETDSKK 546

Query: 58  ---------------ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN 102
                                 YN V + S              + D  A         +
Sbjct: 547 VDGCATFFKNDKFSLIHKQNFEYNSVCMGSDKYKKTKDLFNRFMNKDNIALISYLQHKES 606

Query: 103 TQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD 162
            + + + N +L         K       ++       +               ++    +
Sbjct: 607 GEKIAVVNTHLHWDPAFNDVKALQVGILLEELQGIIKKYRHTNSNEDIKNSSIVVCGDFN 666

Query: 163 CYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF-------WDYYADSW 215
                                   ++ G        H      ++       +     ++
Sbjct: 667 SVKDSAVYQLFSTGASKGHEDMNGRDYGKFTEDGFHHPFKLKSAYEAVGELPFTNLTPAF 726

Query: 216 SKNKGIRIDHIMLS-PEATSLLHSARIDTKPRG-------WTKPSDHTPVIVSLDIPEPR 267
           + N    ID+I  S P         R+D +             PSDH P++    + + +
Sbjct: 727 TDN----IDYIWYSTPTLQVKGLLGRVDEEYTSHSIGFPDANFPSDHVPILAKFQLKKGK 782

Query: 268 K 268
           K
Sbjct: 783 K 783


>gi|118477610|ref|YP_894761.1| hypothetical protein BALH_1938 [Bacillus thuringiensis str. Al
           Hakam]
 gi|118416835|gb|ABK85254.1| conserved hypothetical protein [Bacillus thuringiensis str. Al
           Hakam]
          Length = 264

 Score = 44.4 bits (103), Expect = 0.018,   Method: Composition-based stats.
 Identities = 41/278 (14%), Positives = 78/278 (28%), Gaps = 35/278 (12%)

Query: 3   VVTVATWNV-N--SI-RARIHNLAAWIKENNPDIICLQETKT-----EDKNFPFETLQSL 53
           ++ +AT+N+ N  S+   R+  +   I+  +P I+ LQE ++       KN        +
Sbjct: 7   ILRIATFNIWNHESLWFERLEAICEEIRSISPHILALQEVRSSVNLNSKKNVAQYIAGQI 66

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
            Y      +   +    L+    I I      ++   +    E+ +     T        
Sbjct: 67  GYPFCIFKEYPDSPDEGLAFLSKIPI----IAEEAIWETDIEESNYCAIRITFTYKGCKF 122

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
              N   + K           +    +    +  L+     +        Y       D 
Sbjct: 123 GVTNVHLNWKSSRIRQEQMNTVNNWIENRASDYELLCGDFNDDPFSMVHQYLIRKHWIDV 182

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
               E+ ++      + +        D                     R D IM+   A 
Sbjct: 183 AQFKEIEENMIAQPTLDYRKNPNLKDDVKQE----------------KRYDWIMIQENAA 226

Query: 234 ---SLLHSARIDTK---PRGWTKPSDHTPVIVSLDIPE 265
                + +  I  +         PSDH  V V L   E
Sbjct: 227 FEFPTIENVSIFGESALTSTGMFPSDHYGVFVDLKFNE 264


>gi|47222275|emb|CAG11154.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 360

 Score = 44.4 bits (103), Expect = 0.018,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 9/44 (20%)

Query: 2   SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQET 38
             +++ TWNV+ +       RAR   L ++I    PD++ LQE 
Sbjct: 110 RKLSLITWNVDGLDTDNLAERAR--GLCSFIVLYTPDVVFLQEL 151


>gi|307546855|ref|YP_003899334.1| hypothetical protein HELO_4265 [Halomonas elongata DSM 2581]
 gi|307218879|emb|CBV44149.1| K06896 [Halomonas elongata DSM 2581]
          Length = 273

 Score = 44.4 bits (103), Expect = 0.019,   Method: Composition-based stats.
 Identities = 14/100 (14%), Positives = 30/100 (30%), Gaps = 16/100 (16%)

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
                 ++  +  +L            H      S+  +            +DHI+LS  
Sbjct: 181 HVVVMGDLNCTPDQLHAHERFRKSLPLHPVRPPLSYPSWQPR-------RALDHILLSDS 233

Query: 232 A-TSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQ 270
                +    +          SDH PV + + +P+  ++ 
Sbjct: 234 LQADRV---EVLEHL-----FSDHLPVAIDIRVPDACRET 265


>gi|221487002|gb|EEE25248.1| endonuclease/exonuclease/phosphatase domain-containing protein,
           putative [Toxoplasma gondii GT1]
          Length = 1347

 Score = 44.4 bits (103), Expect = 0.019,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTED-KNFPFETLQSLNYH 56
           R   +   I  +NPD++CLQE ++E  ++F    L    Y+
Sbjct: 864 RRQRILEEILAHNPDVVCLQEVQSEHFEDFFLPELARYGYN 904


>gi|237831705|ref|XP_002365150.1| endonuclease/exonuclease/phosphatase domain-containing protein
           [Toxoplasma gondii ME49]
 gi|211962814|gb|EEA98009.1| endonuclease/exonuclease/phosphatase domain-containing protein
           [Toxoplasma gondii ME49]
 gi|221506685|gb|EEE32302.1| endonuclease/exonuclease/phosphatase domain-containing protein,
           putative [Toxoplasma gondii VEG]
          Length = 1347

 Score = 44.4 bits (103), Expect = 0.019,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTED-KNFPFETLQSLNYH 56
           R   +   I  +NPD++CLQE ++E  ++F    L    Y+
Sbjct: 864 RRQRILEEILAHNPDVVCLQEVQSEHFEDFFLPELARYGYN 904


>gi|315918688|ref|ZP_07914928.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. D2]
 gi|313692563|gb|EFS29398.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp. D2]
          Length = 289

 Score = 44.4 bits (103), Expect = 0.019,   Method: Composition-based stats.
 Identities = 32/265 (12%), Positives = 69/265 (26%), Gaps = 25/265 (9%)

Query: 4   VTVATWNVN-----SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           + VAT+N+          R   +A  IK+ + +I   +E     +   +   Q  + +  
Sbjct: 45  MRVATYNLQVETGTGWTNRRERVAQLIKDYDFEICGFEE--ASWEQRSYLGTQLASDYQI 102

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
               +        +      +        LD    +   T  I +      N        
Sbjct: 103 LAYGRDTGNDDNKAGEMSGILYKKSRYTLLDAGRFWFSETPDIPSNGWDETNFKRFCVWG 162

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
                   K  ++       +         +     +   + +         N      E
Sbjct: 163 KFKDSKTQKEFYLFETHMPLADNARKHACQMLVDAVSDKAKDNTPAFCTGDFNATPDAPE 222

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           +         +       A      L++F              RID I +          
Sbjct: 223 IAT-TICQSGILKDAYREAAVQHGALFTFPSKKT---------RIDFIFV--------KH 264

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263
           A + +     +  SDH P+++ ++I
Sbjct: 265 ATVLSTRTIVSSLSDHYPMVIVVEI 289


>gi|116200462|ref|XP_001226043.1| hypothetical protein CHGG_10776 [Chaetomium globosum CBS 148.51]
 gi|88175490|gb|EAQ82958.1| hypothetical protein CHGG_10776 [Chaetomium globosum CBS 148.51]
          Length = 1241

 Score = 44.4 bits (103), Expect = 0.019,   Method: Composition-based stats.
 Identities = 42/273 (15%), Positives = 70/273 (25%), Gaps = 47/273 (17%)

Query: 9   WNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGV 68
           WN          L A ++E   D++ +QE                         +     
Sbjct: 415 WNTEG---NKQALEALLEEAQYDLMAIQE---------------------PWINQQTKST 450

Query: 69  AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKI 128
                 +   +        + V  +F    +   T        +   GN           
Sbjct: 451 YCPRGSKYHLVHKASGRAAIFVSRKFDTGQWEYETSEEHCKVWFPGLGNSGLELWSIYNP 510

Query: 129 SWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN 188
              K  L+    R     P++ AGD+N+     D +     + +A   L ++        
Sbjct: 511 LEDKTLLQTLLSRPAPAYPVVLAGDFNLHHPQWDRFGRYERKAEALLELALQWDLDLRTP 570

Query: 189 MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGW 248
            G               +                IDH   S        +     + RG 
Sbjct: 571 AGTITRAPQGAQRGRTST----------------IDHFWASVGL----QTTYYGLEYRGK 610

Query: 249 TKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
              SDH P I+  DI  P  +Q      N K +
Sbjct: 611 ---SDHYPQILEADIGGPLPQQTQPGGWNWKMM 640


>gi|116199715|ref|XP_001225669.1| hypothetical protein CHGG_08013 [Chaetomium globosum CBS 148.51]
 gi|88179292|gb|EAQ86760.1| hypothetical protein CHGG_08013 [Chaetomium globosum CBS 148.51]
          Length = 1173

 Score = 44.4 bits (103), Expect = 0.019,   Method: Composition-based stats.
 Identities = 42/273 (15%), Positives = 70/273 (25%), Gaps = 47/273 (17%)

Query: 9   WNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGV 68
           WN          L A ++E   D++ +QE                         +     
Sbjct: 429 WNTEG---NKQALEALLEEAQYDLMAIQE---------------------PWINQQTKST 464

Query: 69  AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKI 128
                 +   +        + V  +F    +   T        +   GN           
Sbjct: 465 YCPRGSKYHLVHKASGRAAIFVSRKFDTGQWEYETSEEHCKVWFPGLGNSGLELWSIYNP 524

Query: 129 SWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN 188
              K  L+    R     P++ AGD+N+     D +     + +A   L ++        
Sbjct: 525 LEDKTLLQTLLSRPAPAYPVVLAGDFNLHHPQWDRFGRYERKAEALLELALQWDLDLRTP 584

Query: 189 MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGW 248
            G               +                IDH   S        +     + RG 
Sbjct: 585 AGTITRAPQGAQRGRTST----------------IDHFWASVGL----QTTYYGLEYRGK 624

Query: 249 TKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
              SDH P I+  DI  P  +Q      N K +
Sbjct: 625 ---SDHYPQILEADIGGPLPQQTQPGGWNWKMM 654


>gi|323455298|gb|EGB11167.1| hypothetical protein AURANDRAFT_61968 [Aureococcus anophagefferens]
          Length = 831

 Score = 44.4 bits (103), Expect = 0.019,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 22/57 (38%), Gaps = 7/57 (12%)

Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWT-------KPSDHTPVIVSLDIPEPRKKQ 270
            ++DH++ +P        A ++               PSDH PV  +L +P  R   
Sbjct: 639 WKLDHVLCTPALRPAARWASLEADAPSRAAGLPNASWPSDHYPVAAALALPGARGDP 695


>gi|299534838|ref|ZP_07048167.1| endonuclease yhcR precursor [Lysinibacillus fusiformis ZC1]
 gi|298729683|gb|EFI70229.1| endonuclease yhcR precursor [Lysinibacillus fusiformis ZC1]
          Length = 1375

 Score = 44.4 bits (103), Expect = 0.019,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 31/81 (38%), Gaps = 10/81 (12%)

Query: 200  DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT---KPSDHTP 256
                 ++++      +  N  + +DHI++S +   +     I           + SDH P
Sbjct: 1195 PEQDRFTYF------FQGNNQV-LDHILVSNKLADVTEIDLIHINANFTEAQGRASDHDP 1247

Query: 257  VIVSLDIPEPRKKQQDSTSQN 277
            V+V +D+    ++     +  
Sbjct: 1248 VLVQIDLKADNEEIPTPITPE 1268


>gi|284031870|ref|YP_003381801.1| endonuclease/exonuclease/phosphatase [Kribbella flavida DSM
          17836]
 gi|283811163|gb|ADB33002.1| Endonuclease/exonuclease/phosphatase [Kribbella flavida DSM
          17836]
          Length = 264

 Score = 44.4 bits (103), Expect = 0.019,   Method: Composition-based stats.
 Identities = 8/35 (22%), Positives = 15/35 (42%), Gaps = 1/35 (2%)

Query: 4  VTVATWNVNSIRARIHNLAAWIKENNPDIICLQET 38
          + + + N     A       W++    D++CLQE 
Sbjct: 1  MRIVSVNAWGG-AMFDEFVPWLETVGADVLCLQEV 34


>gi|87116466|dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 44.4 bits (103), Expect = 0.019,   Method: Composition-based stats.
 Identities = 34/261 (13%), Positives = 76/261 (29%), Gaps = 39/261 (14%)

Query: 4   VTVATWNVNSI-RARIHNLA-AWIKENNPDIICLQETKTE--DKNFPFETLQSLNYHIET 59
           + + +WN   I  +R+       +     D +CL E ++   +K     +   L  H   
Sbjct: 1   MRILSWNCRGIANSRVRRFVKDLLSTTKADALCLLEIRSSKAEKMIALASRLGLTNHFIV 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
                  G+ +L K      V       +   A        I    +R            
Sbjct: 61  NPLGFAGGLLLLWKPALNLSVISHNSQAIHTLASHRLGNCFITFAYIR------------ 108

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                 +  +  + +         ++ P +  GD N I    + +        +      
Sbjct: 109 -----PNTFAKCRFWEYCKQLANSIQSPWMVVGDLNDIATSDEQWGSSSLNYTSLQNFVD 163

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM--LSPEATSLLH 237
             S   L + G +            +++  +  +   + +  R+D ++  +S + T    
Sbjct: 164 AYSDCGLLDPGSSGP---------NFTWCRFIGNRVVQRR--RLDRVLWNVSAQLTFPEA 212

Query: 238 SARIDTKPRGWTKPSDHTPVI 258
              +          SDH P++
Sbjct: 213 KVSVLP-----RLCSDHNPIL 228


>gi|87116459|dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 44.4 bits (103), Expect = 0.019,   Method: Composition-based stats.
 Identities = 34/261 (13%), Positives = 76/261 (29%), Gaps = 39/261 (14%)

Query: 4   VTVATWNVNSI-RARIHNLA-AWIKENNPDIICLQETKTE--DKNFPFETLQSLNYHIET 59
           + + +WN   I  +R+       +     D +CL E ++   +K     +   L  H   
Sbjct: 1   MRILSWNCRGIANSRVRRFVKDLLSTTKADALCLLEIRSSKAEKMIALASRLGLTNHFIV 60

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
                  G+ +L K      V       +   A        I    +R            
Sbjct: 61  NPLGFAGGLLLLWKPALNLSVISHNSQAIHTLASHRLGNCFITFAYIR------------ 108

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                 +  +  + +         ++ P +  GD N I    + +        +      
Sbjct: 109 -----PNTFAKCRFWEYCKQLANSIQSPWMVVGDLNDIATSDEQWGSSSLNYTSLQNFVD 163

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM--LSPEATSLLH 237
             S   L + G +            +++  +  +   + +  R+D ++  +S + T    
Sbjct: 164 AYSDCGLLDPGSSGP---------NFTWCRFIGNRVVQRR--RLDRVLWNVSAQLTFPEA 212

Query: 238 SARIDTKPRGWTKPSDHTPVI 258
              +          SDH P++
Sbjct: 213 KVSVLP-----RLCSDHNPIL 228


>gi|328473848|gb|EGF44678.1| hypothetical protein LM220_01292 [Listeria monocytogenes 220]
          Length = 23

 Score = 44.4 bits (103), Expect = 0.019,   Method: Composition-based stats.
 Identities = 6/17 (35%), Positives = 11/17 (64%)

Query: 4  VTVATWNVNSIRARIHN 20
          + + +WNVN +RA +  
Sbjct: 1  MKLISWNVNGLRAAVKK 17


>gi|306825594|ref|ZP_07458933.1| RgfB protein [Streptococcus sp. oral taxon 071 str. 73H25AP]
 gi|304431955|gb|EFM34932.1| RgfB protein [Streptococcus sp. oral taxon 071 str. 73H25AP]
          Length = 271

 Score = 44.4 bits (103), Expect = 0.019,   Method: Composition-based stats.
 Identities = 32/267 (11%), Positives = 80/267 (29%), Gaps = 20/267 (7%)

Query: 4   VTVATWNVNSI--RARIHNLAAWIKEN---NPDIICLQETKTEDKNFPFETLQSLNY--- 55
           +   T N +S   +         +++    + D+IC QE     +    E   + +Y   
Sbjct: 1   MKFLTLNTHSWMEKEAEEKFQLLLQDILDKDYDLICFQEI--NQEMTSPEVEVNNHYQAL 58

Query: 56  ------HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
                 H +   +     +A   K        +  G D   +   I +   I  + + + 
Sbjct: 59  PSAEPIHQDHYVRLLVEKLAEKGKNYYWTWAYNHIGYDRYHEGVAILSKTPIKAREILVS 118

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG-DYNIIPQPHDCYNPII 168
           ++  P           +     K     +      ++        +  + +  +    + 
Sbjct: 119 DVDDPTDYHTRRVVLTETEVEGKELAVASVHLSWWDKGFQEEWARFEAVLKELNKPLILA 178

Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
            + +     E  Q+      +G  DA+    +    Y+            + +RID++  
Sbjct: 179 GDFNNPAGQEGYQAILASP-LGLQDALEVAKERSGSYTVPPEIDGWKGNTEPLRIDYVFT 237

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHT 255
           + +    + S  +    +   + SDH 
Sbjct: 238 TKDLE--VESLHVVFDGQNGPQVSDHY 262


>gi|209518265|ref|ZP_03267091.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. H160]
 gi|209501285|gb|EEA01315.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. H160]
          Length = 290

 Score = 44.4 bits (103), Expect = 0.019,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 19/38 (50%), Gaps = 4/38 (10%)

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           D + ++ + ++ + S  +D   R     SDH P+ + L
Sbjct: 256 DFVFVTQDLSTRVASCEVDPHSRS----SDHQPMWLEL 289


>gi|330993334|ref|ZP_08317269.1| endonuclease/exonuclease/phosphatase [Gluconacetobacter sp. SXCC-1]
 gi|329759364|gb|EGG75873.1| endonuclease/exonuclease/phosphatase [Gluconacetobacter sp. SXCC-1]
          Length = 283

 Score = 44.4 bits (103), Expect = 0.020,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 6/48 (12%)

Query: 223 IDHIMLSPEATSLLH----SARIDTKPRGWT--KPSDHTPVIVSLDIP 264
           IDHI++   A + +        +  +  G    + SDH PV V+L +P
Sbjct: 236 IDHILVGGPAYARVRPDSLRVMLYHEDSGTEASRLSDHCPVSVNLSLP 283


>gi|319946436|ref|ZP_08020673.1| RgfB protein [Streptococcus australis ATCC 700641]
 gi|319747404|gb|EFV99660.1| RgfB protein [Streptococcus australis ATCC 700641]
          Length = 271

 Score = 44.4 bits (103), Expect = 0.020,   Method: Composition-based stats.
 Identities = 35/278 (12%), Positives = 66/278 (23%), Gaps = 24/278 (8%)

Query: 4   VTVATWNVNSIRARIH-----NLAAWIK---ENNPDIICLQETK---------TEDKNFP 46
           +   T N +S    +           +K   E   D+IC QE             D   P
Sbjct: 1   MKFLTLNTHS---WMEENPQQKFEDLLKDILEKQYDLICFQEINQAIESPVVPVNDLYHP 57

Query: 47  FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
             + + ++                LS         +  G D   +   I +   I    L
Sbjct: 58  TPSAEPIHQDHYVRCLVEKLEEEGLS--YHWTWAYNHIGYDRYHEGVAILSRTPIQASEL 115

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
            + +   P           +     K     +      ++                    
Sbjct: 116 LVSDANDPTDYHTRRIAIAETQVDGKEIAVASVHLSWWDKGFQQEWARLEERFSQLQKPL 175

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226
           I+  +      +          +   D+      T   Y+              +RID++
Sbjct: 176 ILAGDFNNPAGQEGYEAILASPLALQDSFIEARQTKGTYTVGPGIDGWDDNQVPLRIDYV 235

Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
             S E    +    +          SDH  +   L +P
Sbjct: 236 FTSKEWV--IERLEVVFDGSSQPLVSDHYGLSADLYLP 271


>gi|260462359|ref|ZP_05810567.1| Endonuclease/exonuclease/phosphatase [Mesorhizobium opportunistum
           WSM2075]
 gi|259031853|gb|EEW33121.1| Endonuclease/exonuclease/phosphatase [Mesorhizobium opportunistum
           WSM2075]
          Length = 336

 Score = 44.4 bits (103), Expect = 0.020,   Method: Composition-based stats.
 Identities = 42/260 (16%), Positives = 68/260 (26%), Gaps = 44/260 (16%)

Query: 19  HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIE 78
             + + I   NPD+I L E     +        +  Y I         GVA+LS+     
Sbjct: 110 KKVLSLIGRTNPDVITLDEVSAMWETELGYITSAYPYRILCPYPNGVFGVALLSRRPF-- 167

Query: 79  IVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFA 138
                        A   E    +   T+  G   +       S  +  + +W    L  +
Sbjct: 168 ---------AADSAPHCEPRGAMAIATVDFGGTAVNVAAIHLSWPWPREQNWQIGELSNS 218

Query: 139 SQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT 198
              L   E  I AGD N +P                                        
Sbjct: 219 ISSL--GETAIMAGDCNAVPWSAAVRRVASLGGLTVMPSAGPTWLYIKLPDVL------- 269

Query: 199 HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVI 258
                             +  G+ ID +  S           + +  R     SDH PV+
Sbjct: 270 -----------------RRFAGLPIDQVF-SKG------GVTVHSATRLEDTGSDHLPVL 305

Query: 259 VSLDIPEPRKKQQDSTSQNM 278
           V   +    K+ +D  +  +
Sbjct: 306 VEFSVRSAEKQPEDRHATAL 325


>gi|323490963|ref|ZP_08096158.1| endonuclease yhcR [Planococcus donghaensis MPA1U2]
 gi|323395443|gb|EGA88294.1| endonuclease yhcR [Planococcus donghaensis MPA1U2]
          Length = 1164

 Score = 44.4 bits (103), Expect = 0.020,   Method: Composition-based stats.
 Identities = 11/82 (13%), Positives = 29/82 (35%), Gaps = 10/82 (12%)

Query: 200  DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT---KPSDHTP 256
                 YS++ Y  +S        +DH++++           +           + SDH P
Sbjct: 926  PLEDRYSYY-YQGNSQV------LDHLLVTNNLAQRTELDMVHINAMFMEEHGRASDHDP 978

Query: 257  VIVSLDIPEPRKKQQDSTSQNM 278
            ++  +   +P    + +   ++
Sbjct: 979  LLAQISFEKPAVPGEQTAKPDL 1000


>gi|260173205|ref|ZP_05759617.1| hypothetical protein BacD2_15145 [Bacteroides sp. D2]
 gi|315921479|ref|ZP_07917719.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313695354|gb|EFS32189.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 608

 Score = 44.4 bits (103), Expect = 0.020,   Method: Composition-based stats.
 Identities = 34/278 (12%), Positives = 74/278 (26%), Gaps = 58/278 (20%)

Query: 3   VVTVATWNV---NSIRARIH------NLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
            + + T+N+   N     +        +A  I   +PD++ +QE                
Sbjct: 22  TLRLMTYNIKNANG----MDDICNFQRVANVINNASPDVVAIQEV--------------- 62

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
                T        +  +++   +             +      T  +    LR+  + L
Sbjct: 63  --DSMTRRSGQKYVLGEIAERTQMHACFAPAIKFDGGKYGIGLLTKQVP---LRLQAIPL 117

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
           P           +   +I      +    +  + L     +    +        +     
Sbjct: 118 PGREEARILILAEFEDYIYCCTHLSLTEEDRMKSLEIVKSFTASYKKPLFLAGDMNAEPE 177

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI--MLSPE 231
              ++  Q   ++ +        A                         ID+I  + S  
Sbjct: 178 SDFIKELQKDFQILSNPKQSTYPAPDPKET-------------------IDYITALKSNA 218

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKK 269
               L S+++  +P      SDH P++V L   E   K
Sbjct: 219 NGFALISSQVLDEPM----ASDHRPILVELRTAEKADK 252


>gi|29654239|ref|NP_819931.1| endonuclease/exonuclease/phosphatase family protein [Coxiella
           burnetii RSA 493]
 gi|29541505|gb|AAO90445.1| endonuclease/exonuclease/phosphatase family protein [Coxiella
           burnetii RSA 493]
          Length = 255

 Score = 44.4 bits (103), Expect = 0.020,   Method: Composition-based stats.
 Identities = 34/265 (12%), Positives = 65/265 (24%), Gaps = 28/265 (10%)

Query: 5   TVATWNVN-SIRARIHNLA-----AWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           TV ++N++    AR            ++  + DI+ LQE + +      +          
Sbjct: 12  TVLSYNIHKGFSARYRRFVLPDIREALRAIDADIVLLQEVQGKHHKSRLKKFA------- 64

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
                        SK+       +            +        + + + +L       
Sbjct: 65  -HADLPQTEFIAESKWPHYMYGKNAVYGSAHHGNALLSNFPFKMVENINV-SLSQRASRS 122

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
           I     D + +     +         E           I      + P+I   D      
Sbjct: 123 ILHAIIDYEPTVELHVICIHLGLFRAERDYQLITLSKRIEAHVPSHAPLIIAGDFNDWRR 182

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
              ++ + +                 Y        S    +  RI +          L S
Sbjct: 183 GAFNYMEKELELKEVYKVLEGKHAKTY------PASRPTLEVDRIYY----RGL--KLLS 230

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263
             I  +   W K SDH P+     I
Sbjct: 231 GEIFNESY-WKKLSDHLPLHAKFAI 254


>gi|325105102|ref|YP_004274756.1| Endonuclease/exonuclease/phosphatase [Pedobacter saltans DSM 12145]
 gi|324973950|gb|ADY52934.1| Endonuclease/exonuclease/phosphatase [Pedobacter saltans DSM 12145]
          Length = 278

 Score = 44.4 bits (103), Expect = 0.020,   Method: Composition-based stats.
 Identities = 43/278 (15%), Positives = 76/278 (27%), Gaps = 59/278 (21%)

Query: 3   VVTVATWNVN---------SIRARIHNLAAWIKENNPDIICLQET--KTEDKNFPFETLQ 51
              V ++N++         S R  +  +A  I    PD++ L E   KT+      +  +
Sbjct: 42  TFKVMSYNIHIGNPPSKDASYRD-LEAIAQVINIQKPDLVALSEVDNKTKRSGTTVDQAK 100

Query: 52  SLN-----YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
            L      Y+  T       G                        A        +     
Sbjct: 101 ELGRLTGMYYYFTKAMDYQGG------------EYGDAVLSKFPIAESKRYELPVTGTGF 148

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
              +L L          Y    + +       ++ L+    +      N        +N 
Sbjct: 149 EPRSLALILVEKEGHKFY-FGSTHLDHTSAEDNRVLQANTLVDIIKSLNYPLVLAGDWN- 206

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR-IDH 225
                          +    Q +           T   Y+        +  NK  R ID+
Sbjct: 207 ---------------ALPTSQTINILKKALNPTCTDCPYT--------FPMNKPDRTIDY 243

Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           IM  P     + S ++  +    T  SDH P++V L+I
Sbjct: 244 IMYKPAEKFKVKSLKVVNE----TYASDHLPLVVDLEI 277


>gi|145226094|ref|YP_001136748.1| endonuclease/exonuclease/phosphatase [Mycobacterium gilvum PYR-GCK]
 gi|145218557|gb|ABP47960.1| Endonuclease/exonuclease/phosphatase [Mycobacterium gilvum PYR-GCK]
          Length = 399

 Score = 44.4 bits (103), Expect = 0.020,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 20/58 (34%), Gaps = 18/58 (31%)

Query: 223 IDHIMLSPEATSLLHSARIDTK-------PRGWTK-----------PSDHTPVIVSLD 262
           ID+I+LSP  +  + +  I           R   K            SDH  +   L+
Sbjct: 341 IDYILLSPALSERVVAGGIIRSGMWRGPRVRKPWKMYDTLTAEQHAASDHALIWADLE 398


>gi|16263840|ref|NP_436632.1| hypothetical protein SM_b20092 [Sinorhizobium meliloti 1021]
 gi|15139964|emb|CAC48492.1| CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti 1021]
          Length = 252

 Score = 44.4 bits (103), Expect = 0.020,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 21/43 (48%), Gaps = 3/43 (6%)

Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +RIDH+++       + S R+          SDH P++  LD+
Sbjct: 208 LRIDHVLVGKGIE--VASCRVHGSTLAR-SASDHLPLLAELDV 247



 Score = 40.5 bits (93), Expect = 0.26,   Method: Composition-based stats.
 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 5/40 (12%)

Query: 4  VTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQET 38
          +   T+NV+S      R     +AA I E  PD+I LQE 
Sbjct: 12 IRFLTYNVHSCFGTDRRLDPARIAAVIAECQPDVIALQEV 51


>gi|295085529|emb|CBK67052.1| Metal-dependent hydrolase [Bacteroides xylanisolvens XB1A]
          Length = 611

 Score = 44.4 bits (103), Expect = 0.020,   Method: Composition-based stats.
 Identities = 35/278 (12%), Positives = 76/278 (27%), Gaps = 58/278 (20%)

Query: 3   VVTVATWNV---NSIRARIH------NLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
            + + T+N+   N     +        +A  I   +PD++ +QE                
Sbjct: 25  TLRLMTYNIKNANG----MDDICSFQRVANVINNASPDVVAIQEV--------------- 65

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
                T        +  +++   +        +    +      T  +    LR+  + L
Sbjct: 66  --DSMTRRSGQKYVLGEIAERTQMHACFAPAIEFEGGKYGIGLLTKQVP---LRLQTIPL 120

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
           P      +    +   +I      +    +  + L          +        +     
Sbjct: 121 PGREEARTLILAEFEDYIYCCTHLSLAEEDRMKSLEIVKSLIASYKKPLFLAGDMNAEPE 180

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
              ++  Q   ++ +        A                         ID+I  S +  
Sbjct: 181 SDFIKELQKDFQILSNPEKHTYPAPDPKET-------------------IDYIAASKQNA 221

Query: 234 S--LLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKK 269
           +   + SAR+  +P      SDH P++V L   E   K
Sbjct: 222 TGFAVISARVVNEPM----ASDHRPILVELRTAEKTDK 255


>gi|294625453|ref|ZP_06704084.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|294664696|ref|ZP_06730028.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292600276|gb|EFF44382.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292605521|gb|EFF48840.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 299

 Score = 44.4 bits (103), Expect = 0.020,   Method: Composition-based stats.
 Identities = 37/274 (13%), Positives = 70/274 (25%), Gaps = 27/274 (9%)

Query: 4   VTVATWNVNSIR----ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           +T+ T N++  R    AR  ++A  +K   PD+I LQE          E    +      
Sbjct: 47  MTLVTLNLHHDREDWPARRAHIAKELKRLAPDVIALQEV--------IERRGGVENQAAW 98

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
             +K        S         +        +               R+        +  
Sbjct: 99  LARKLGYDYTFASVDPVGAPKRYGNALLSRRRVLATHQRLLQPLDDYRVAAHLQVDVDGQ 158

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
               Y   ++          +  ++ + L F    +         +     +        
Sbjct: 159 PVNVYVTHLNERADARGTGIRTRQVADLLDFIASNSAQAPVVIAGDFNTAADTLDLQALR 218

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
           R       ++        +    H++            ++  RIDH+        L   A
Sbjct: 219 RGYGDSYGSVHRNSDATVSTLNMHVF------------DRPARIDHVFFQQN-RLLAREA 265

Query: 240 RIDTKPRGWTK--PSDHTPVIVSLDIPEPRKKQQ 271
           RI            SDH  V V L +    +   
Sbjct: 266 RILFDTPYAEGRWASDHYGVWVRLQLAPQAQSAP 299


>gi|157151235|ref|YP_001449822.1| RgfB [Streptococcus gordonii str. Challis substr. CH1]
 gi|157076029|gb|ABV10712.1| RgfB [Streptococcus gordonii str. Challis substr. CH1]
          Length = 271

 Score = 44.4 bits (103), Expect = 0.020,   Method: Composition-based stats.
 Identities = 31/252 (12%), Positives = 70/252 (27%), Gaps = 13/252 (5%)

Query: 18  IHNLAAWIKENNPDIICLQETK--TEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75
           ++ LA  I +   D+ICLQE     E +                  Q  +    +    +
Sbjct: 21  LNQLAERILQEKYDVICLQEVNQLMESEQVVQAPFYQAVEGAIAIHQDHFALCLVKKLAE 80

Query: 76  PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKR-- 133
                      +      + E    ++   L    + +   N          +       
Sbjct: 81  AGLDYHWSWAYNHIGFDIYNEGVTILSKNPLTPKEVLVSEVNDPRDYHTRKVLLAETEVE 140

Query: 134 -FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192
             L   +          F G+++ + +        +            + +Q +  +   
Sbjct: 141 GQLMTIASCHLSWWGKGFQGEWSKLEEELLKVKTPLVLMGDFNNPVDYEGYQHI--LKSP 198

Query: 193 DAIRATHDTHHLYSFWDYYADS---WSKNK-GIRIDHIMLSPEATSLLHSARIDTKPRGW 248
             ++ +H      S       +   W  N+  ++ID+I  S      + S+ +    +  
Sbjct: 199 LKLQDSHKVAQKISGQATVEGAIAGWDGNQDALKIDYIFTSQGI--QIESSAVVFDGKET 256

Query: 249 TKPSDHTPVIVS 260
              SDH  + V 
Sbjct: 257 PVVSDHFGLEVE 268


>gi|119196745|ref|XP_001248976.1| hypothetical protein CIMG_02747 [Coccidioides immitis RS]
          Length = 2000

 Score = 44.0 bits (102), Expect = 0.021,   Method: Composition-based stats.
 Identities = 32/238 (13%), Positives = 69/238 (28%), Gaps = 39/238 (16%)

Query: 28  NNPDIICLQETKTEDKNFP-FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGD 86
            + DI+ +QE        P      + +YH      +        ++          PG 
Sbjct: 645 LDYDILAIQE--------PWRNPFIATSYHPLKTHFQLMYLADAATRVCMYVSKRIDPGT 696

Query: 87  DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK-YDDKISWIKRFLRFASQRLELE 145
                         I+   + +       G  ++    Y++  +     L  A + L+ +
Sbjct: 697 WSVSY---------ISKDIISLEIFNPHSGRKVSIFNVYNEVGTDTLSTLAGAIRALDSQ 747

Query: 146 EPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY 205
           E ++  GD+N+        +                + + L  +        T      Y
Sbjct: 748 EEIVVLGDFNLHHPLWSATHRRANN--------TPNAQELLSVIEEFQLQLLTEPGTPTY 799

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            + D  +          ID    S +    +   +ID +       SDH P+ ++ + 
Sbjct: 800 RWKDGEST---------IDLTFASEDVAGCVIRCKIDREV---DCDSDHLPIAIAFEW 845


>gi|322703506|gb|EFY95114.1| exonuclease III [Metarhizium anisopliae ARSEF 23]
          Length = 654

 Score = 44.0 bits (102), Expect = 0.021,   Method: Composition-based stats.
 Identities = 27/261 (10%), Positives = 57/261 (21%), Gaps = 29/261 (11%)

Query: 22  AAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81
             +I     DI+ LQE             +++ +      Q    G+             
Sbjct: 343 VRFITNARADIVGLQE---STGGHAIRLAKAMGWDY---WQGDDVGIISRYPMVEQYAPI 396

Query: 82  HLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQR 141
              G       R  E  F            Y    + ++  +        +R  +  +  
Sbjct: 397 ERCGAVRIALDRGQEINFWNCHLGYTPYGPYDFCFDHLSPEEVLKNEIKSRRTPQIINIM 456

Query: 142 LELEEP---------LIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192
             +++          +                   +      F     +       +   
Sbjct: 457 KHMQDHLSQSSKTPVIFTGDFNAPSHLDWTNATKKLHCGQGYFPWPTSKHPIDAGLIDSF 516

Query: 193 DAIRATHDTHHLYSFW----DYYADSWSKNKGIRIDHIMLSPEATSLLHSARI------D 242
             + +        ++     D    +  K+   RID I       +    A +       
Sbjct: 517 REVHSDPLVQPGLTWSPIYLDNGGRTEPKD---RIDFIY-HKGLKTHSSEAVVVGQPKAQ 572

Query: 243 TKPRGWTKPSDHTPVIVSLDI 263
                   PSDH  V     +
Sbjct: 573 PDHYHNEWPSDHAAVKTVFKV 593


>gi|291222530|ref|XP_002731269.1| PREDICTED: phosphatidylinositol polyphosphate 5-phosphatase-like
           [Saccoglossus kowalevskii]
          Length = 488

 Score = 44.0 bits (102), Expect = 0.021,   Method: Composition-based stats.
 Identities = 41/291 (14%), Positives = 73/291 (25%), Gaps = 46/291 (15%)

Query: 6   VATWNVNSIRARIHNLAAWIK--ENNPDI--ICLQETKTEDKNF-----PFET------L 50
           + TWNVN  ++   +L  W+      PDI  +  QE     + F     P E        
Sbjct: 74  IGTWNVNG-KSCAEDLGPWLACDAEPPDIYAVGFQELDLSKEAFLFNDSPREEEWLRGVY 132

Query: 51  QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR---FIEATFTINTQTLR 107
           ++L+        K    V ++        +     D                  NT  + 
Sbjct: 133 KALHPRANYKKIKLIRLVGMMLIVFAKHELASYITDVAAETGNKGGVGVRLVFHNTTFVF 192

Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG-------DYNIIPQP 160
           I +    H         D      +   +     L + +                +    
Sbjct: 193 INSHLAAHVEEYERRNQDYNDICSRMLFKDFGSPLHISQHDAIFWLGDLNYRISELSADE 252

Query: 161 HDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY-----SFWD---YYA 212
              +       D     ++ +  +  +               + Y     S+       A
Sbjct: 253 VKGFIRKDMLRDVYEYDQLNRQMRIQKAFIGFTEGEINFLPTYKYDSGTDSWDSSEKNRA 312

Query: 213 DSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            +W        D I+   E+   L             K SDH PV    D+
Sbjct: 313 PAW-------CDRILYRGESIRQLK----YRGHMAL-KISDHKPVSSIFDV 351


>gi|84997700|ref|XP_953571.1| sphingomyelinase, [Theileria annulata]
 gi|65304568|emb|CAI72893.1| sphingomyelinase,, putative [Theileria annulata]
          Length = 574

 Score = 44.0 bits (102), Expect = 0.021,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 55/216 (25%), Gaps = 20/216 (9%)

Query: 6   VATWNV-----------N-SIRARI--HNLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51
           + ++NV           N  IR+RI    L   + + + D++ LQE       F      
Sbjct: 209 IMSYNVQCIPWYLVPGYNIGIRSRILPKYLVEIVNKYSIDVLILQEC------FDKNIFN 262

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
           S    +      S N +   +++      ++     ++     +     IN   L   N 
Sbjct: 263 SFKNSLYHLLPFSTNLIGCKNEWDSTMNNSNRWLILINGGVCILSRYPIINRHQLIFKNC 322

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
                               KR     +     + P  F                 +  N
Sbjct: 323 RNTCSLASKGACLAVINKGNKRINIIGTHLQAYDGPSKFIRQQQFNEIIQWLMTLDVNIN 382

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF 207
           D         +        F   +   +     ++F
Sbjct: 383 DPYILAGDLNTCCLTDTSEFNTMLSNENFIKFTHTF 418


>gi|16759734|ref|NP_455351.1| hypothetical protein STY0848 [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29142493|ref|NP_805835.1| hypothetical protein t2075 [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|213161219|ref|ZP_03346929.1| hypothetical protein Salmoneentericaenterica_14750 [Salmonella
           enterica subsp. enterica serovar Typhi str. E00-7866]
 gi|213586700|ref|ZP_03368526.1| hypothetical protein SentesTyph_37640 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
 gi|213647750|ref|ZP_03377803.1| hypothetical protein SentesTy_10972 [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|213855118|ref|ZP_03383358.1| hypothetical protein SentesT_13982 [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|289825286|ref|ZP_06544565.1| hypothetical protein Salmonellentericaenterica_07871 [Salmonella
           enterica subsp. enterica serovar Typhi str. E98-3139]
 gi|25353375|pir||AB0599 conserved hypothetical protein ybhP [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16502027|emb|CAD05260.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29138124|gb|AAO69695.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
          Length = 252

 Score = 44.0 bits (102), Expect = 0.021,   Method: Composition-based stats.
 Identities = 30/257 (11%), Positives = 59/257 (22%), Gaps = 39/257 (15%)

Query: 15  RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN--YHIETCGQKSYNGVAILS 72
           R  +  L   ++    DI+CLQE            +++     H E      ++  A   
Sbjct: 27  RFILPELRDAVRTVGADIVCLQEV-MGAHEVHPLHIENWPDTTHYEFLADTMWSDFAYGR 85

Query: 73  KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIK 132
                E               +     ++     R           IT    +  I  + 
Sbjct: 86  NAVYPEGHHGNAVLSRYPIEHYENRGVSVGGSEKRGVLYC-----RITPPMLNRPIHVMC 140

Query: 133 RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192
             L       + +  ++      +             +        +  +  +       
Sbjct: 141 VHLGLRESHRQAQLTMLAGWVNALPESEPVLVAGDFNDWRQKAGPPLNAAGLEEIFTRAH 200

Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML------SPEATSLLHSARIDTKPR 246
                T                      +R+D I +      SP A             R
Sbjct: 201 GRPARTFPVSMPL---------------LRLDRIYVKNANASSPGALP----------LR 235

Query: 247 GWTKPSDHTPVIVSLDI 263
            W   SDH P+   + +
Sbjct: 236 NWRHLSDHAPLSAEIHL 252


>gi|302792621|ref|XP_002978076.1| hypothetical protein SELMODRAFT_418021 [Selaginella moellendorffii]
 gi|300154097|gb|EFJ20733.1| hypothetical protein SELMODRAFT_418021 [Selaginella moellendorffii]
          Length = 355

 Score = 44.0 bits (102), Expect = 0.021,   Method: Composition-based stats.
 Identities = 40/303 (13%), Positives = 76/303 (25%), Gaps = 67/303 (22%)

Query: 16  ARIHNLAAWIKENNPDIICLQETKTED-KNFPFETLQSLNYHIETCGQKSYNGVAILSKY 74
            R   + + +   + D++CLQE   ++ ++F    L+S  Y      +           Y
Sbjct: 66  TRSEQVLSRLLSLDADLLCLQE--LDEFESFYKPLLESKGYSSIYIQRSGNRRDGCGIIY 123

Query: 75  QPIEIVTHLPGDDLDVQARFIEAT--------------------------FTINTQTLRI 108
           +P                   E T                                  R 
Sbjct: 124 KPERCQLLKQQFLDYNDIAPDETTAGRASESVEEENDRDVSDPRVRFRRNCVGILSAFRF 183

Query: 109 GNLYLPHGNPITSTKYD-------------DKISWIKRFLRFASQRLELEEPLIFAGDYN 155
            +          +  Y                ++ + +F +  SQ       ++ AGD+N
Sbjct: 184 NHAPSNIVVIANTHLYWDPALQDVKLAQAKYLLAKLSQFEKEISQEFNSNPVVLVAGDFN 243

Query: 156 IIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY---------S 206
             P             ++   +E+                        LY         +
Sbjct: 244 STPGDRVYNYITSGRRNSGPDVELSSFKVP----DLESLKVPAIPLDSLYAAVQGEPALT 299

Query: 207 FWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA-----RIDTKPRGWTKPSDHTPVIVSL 261
            W          KG  +D+I  SP A+    +       ++        PSDH P+    
Sbjct: 300 NWS------PNFKGT-LDYIFFSPSASMRPKTILEVPPDVEEGLPNHFHPSDHLPIGADF 352

Query: 262 DIP 264
            + 
Sbjct: 353 SLS 355


>gi|299145528|ref|ZP_07038596.1| putative endonuclease/exonuclease/phosphatase family protein
           [Bacteroides sp. 3_1_23]
 gi|298516019|gb|EFI39900.1| putative endonuclease/exonuclease/phosphatase family protein
           [Bacteroides sp. 3_1_23]
          Length = 289

 Score = 44.0 bits (102), Expect = 0.021,   Method: Composition-based stats.
 Identities = 32/265 (12%), Positives = 69/265 (26%), Gaps = 25/265 (9%)

Query: 4   VTVATWNVN-----SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           + VAT+N+          R   +A  IK+ + +I   +E     +   +   Q  + +  
Sbjct: 45  MRVATYNLQVETGTGWTNRRERVAQLIKDYDFEICGFEE--ASWEQRSYLGTQLASDYQI 102

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
               +        +      +        LD    +   T  I +      N        
Sbjct: 103 LAYGRDTGNDDNKAGEMSGILYKKSRYTLLDAGRFWFSGTPDIPSNGWDETNFKRFCVWG 162

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
                   K  ++       +         +     +   + +         N      E
Sbjct: 163 KFKDSKTQKEFYLFETHMPLADNARKHACQMLVDAVSDKAKDNTPAFCTGDFNATPDAPE 222

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           +         +       A      L++F              RID I +          
Sbjct: 223 IAT-TICQSGILKDAYREAAVQHGALFTFPSKKT---------RIDFIFV--------KH 264

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263
           A + +     +  SDH P+++ ++I
Sbjct: 265 ATVLSTRTIVSSLSDHYPMVIVVEI 289


>gi|328724145|ref|XP_003248042.1| PREDICTED: hypothetical protein LOC100575610 [Acyrthosiphon pisum]
          Length = 512

 Score = 44.0 bits (102), Expect = 0.021,   Method: Composition-based stats.
 Identities = 39/262 (14%), Positives = 73/262 (27%), Gaps = 41/262 (15%)

Query: 5   TVATWNVNSI-RA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
            + TWNV S+ R     NL   +      +  +QE +                       
Sbjct: 27  KIVTWNVTSLYRTDASQNLVDVLNTYIIKVAAIQEIR----------------------- 63

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP---HGNPI 119
               G   + KY   E  + +           +  T     + + I N + P     + +
Sbjct: 64  WLGVGQLTIGKYTSTEFFSGMENTHHFGNGFAVHRTLVPYIKDICIINGHAPTEIKDDNV 123

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
             + YD+     +       + +  +       +    P            ++    +  
Sbjct: 124 KDSFYDELTETYEDITGNMIRIVIGDFNAKCGREPQYFPCIGKESLHCNSNDNGQRLIA- 182

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
                   N     +    H   H  ++     D  + N+   IDHI++     S +H  
Sbjct: 183 ----FATSNGLTVSSTTFPHKNIHKATWKS--PDGETLNQ---IDHILIQNRYRSTIHDV 233

Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261
                 RG    +DH  VI  L
Sbjct: 234 ---RSHRGADCDTDHYLVIAKL 252


>gi|161830200|ref|YP_001596787.1| endonuclease/exonuclease/phosphatase family protein [Coxiella
           burnetii RSA 331]
 gi|161762067|gb|ABX77709.1| endonuclease/exonuclease/phosphatase family protein [Coxiella
           burnetii RSA 331]
          Length = 255

 Score = 44.0 bits (102), Expect = 0.021,   Method: Composition-based stats.
 Identities = 34/265 (12%), Positives = 65/265 (24%), Gaps = 28/265 (10%)

Query: 5   TVATWNVN-SIRARIHNLA-----AWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           TV ++N++    AR            ++  + DI+ LQE + +      +          
Sbjct: 12  TVLSYNIHKGFSARYRRFVLPDIREALRAIDADIVLLQEVQGKHHKSRLKKFA------- 64

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
                        SK+       +            +        + + + +L       
Sbjct: 65  -HADLPQTEFIAESKWPHYMYGRNAVYGSAHHGNALLSNFPFKMVENINV-SLSQRASRS 122

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
           I     D + +     +         E           I      + P+I   D      
Sbjct: 123 ILHAIIDYEPTVELHVICIHLGLFRAERDYQLITLSKRIEAHVPSHAPLIIAGDFNDWRR 182

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
              ++ + +                 Y        S    +  RI +          L S
Sbjct: 183 GAFNYMEKELELKEVYKVLEGKHAKTY------PASRPTLEVDRIYY----RGL--KLLS 230

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263
             I  +   W K SDH P+     I
Sbjct: 231 GEIFNENY-WKKLSDHLPLHAKFAI 254


>gi|325186273|emb|CCA20779.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 279

 Score = 44.0 bits (102), Expect = 0.021,   Method: Composition-based stats.
 Identities = 34/271 (12%), Positives = 71/271 (26%), Gaps = 39/271 (14%)

Query: 6   VATWNVNSIRA---------RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56
           V ++NV +  A         R   L  +I+  NPD I  QE     + F F         
Sbjct: 22  VISYNVRTSNAPDVSYPWTDRKQQLQPFIEAENPDFIGTQE--ASPEQFEF--------- 70

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                Q++      ++     E   +     +  ++ +    F      +R  N +    
Sbjct: 71  ----FQQALGDTYGITGECAGECYENERPFLMYKKSEWNSLEFGSFALEIRGSNTWNLEY 126

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFA------GDYNIIPQPHDCYNPIIWE 170
               S +     S       F +     +  L  +                      +  
Sbjct: 127 KRSVSWQRFQHKSNSISICLFNTHFDMTKGHLESSKLIVQERSKICKSFDFFILTGDLNA 186

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230
           N     +   +    +  +        T     +++     +  +        D+I + P
Sbjct: 187 NLQDDAIHYLKGIPLISTLQQCGYQGGTFIGPGVFTG-PLSSAVF--------DYIFIQP 237

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
                +  + I    R     +DH  V  + 
Sbjct: 238 NENIRIIGSSIIDSRRNGQAITDHAIVKTTF 268


>gi|302808881|ref|XP_002986134.1| hypothetical protein SELMODRAFT_425108 [Selaginella moellendorffii]
 gi|300145993|gb|EFJ12665.1| hypothetical protein SELMODRAFT_425108 [Selaginella moellendorffii]
          Length = 852

 Score = 44.0 bits (102), Expect = 0.021,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 23/56 (41%), Gaps = 12/56 (21%)

Query: 1   MSVVTVATWNVNSI----------RARIHNLAAWIKEN--NPDIICLQETKTEDKN 44
           M+ ++V +WNV  I          +AR+      ++      D  C QE + ++  
Sbjct: 608 MTDLSVLSWNVGGISKDGVLWNDKKARLRQYLRQLEGVIGKCDFFCFQEQRMQEHQ 663



 Score = 39.0 bits (89), Expect = 0.75,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 53/182 (29%), Gaps = 19/182 (10%)

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
           R+          I    +        +  +   +  +  +  I AGD+N     H+    
Sbjct: 634 RLRQYLRQLEGVIGKCDFFCFQEQRMQEHQTIFKFSQGIDDWILAGDFNF--MDHEEDKR 691

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATH--DTHHLYSFWDYYADSWSKNKGIRID 224
                D C  +E       L  +G  DA            +++ +            R+D
Sbjct: 692 GGIIQDRCTRVECLAWNSFLLQIGTCDAYEIPGFVTHEPRFTWRERQHRGLQ----CRLD 747

Query: 225 HIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQ------DSTSQNM 278
              L+ +         ID         SDH P+ ++  +P  R +          +S   
Sbjct: 748 RFYLTMDLCMQGGKLDIDNTYTD---FSDHHPIRLT--LPFRRSRGPRSQLPYPRSSLRS 802

Query: 279 KP 280
           KP
Sbjct: 803 KP 804


>gi|25027653|ref|NP_737707.1| hypothetical protein CE1097 [Corynebacterium efficiens YS-314]
 gi|259506945|ref|ZP_05749845.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
 gi|23492935|dbj|BAC17907.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
 gi|259165483|gb|EEW50037.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
          Length = 292

 Score = 44.0 bits (102), Expect = 0.021,   Method: Composition-based stats.
 Identities = 36/266 (13%), Positives = 63/266 (23%), Gaps = 36/266 (13%)

Query: 6   VATWNVNSIRARIHN---------------LAAWIKENNPDIICLQETKTEDKN--FPFE 48
           V TWN   IR RI                 +   + +  P I+ +QE     +   F  +
Sbjct: 25  VMTWN---IRRRIPGQLTHRADRWATRAPLIREALSQLRPTILGVQE--ALPEQTAFLQQ 79

Query: 49  TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108
            L     H      +  +     +          L        +   E   +++   L  
Sbjct: 80  VLGPS--HRFVGWGRGRHHTGEATPVFYDTTQLELIDWRQQALSDTPEVPGSVSWGNLFP 137

Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168
                       +       +     L   S+               +        N   
Sbjct: 138 RAFVAATFRHRATGTRFLVFNTHLDPLSRRSRLRSARAIRDHIRTTQLPAVVTGDVNAHQ 197

Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
                                                +F +Y A    +  G RID I+ 
Sbjct: 198 NSATFRAFTSGNVLTDTWSVAAGHLTAEWG-------TFPNYRA---PRPGGKRIDWILS 247

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDH 254
           +P+    +H A I+ +       SDH
Sbjct: 248 TPDW--QVHRAGINARQYAGAWASDH 271


>gi|300939825|ref|ZP_07154463.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 21-1]
 gi|300455357|gb|EFK18850.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 21-1]
          Length = 253

 Score = 44.0 bits (102), Expect = 0.022,   Method: Composition-based stats.
 Identities = 34/267 (12%), Positives = 65/267 (24%), Gaps = 32/267 (11%)

Query: 5   TVATWNVN-SI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN--YH 56
            V T N++        R  +  L   ++  + DI+CLQE            +++     H
Sbjct: 11  KVLTINIHKGFTAFNRRFILPELRDAVRSVSADIVCLQEV-MGAHEVHPLHVENWPDTSH 69

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
            E      ++  A        E               +     +++    R         
Sbjct: 70  YEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVP 129

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
                  +   +    R     +Q   L E +    D  ++    D  +     N     
Sbjct: 130 PMTGKAIHVMCVHLGLREAHRQAQLAMLAEWVNELPDGELVLVAGDFNDWRQKANHPLKV 189

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
                      +                                +R+D I +     +  
Sbjct: 190 QAGLDEIFTRAHGRPARTFPVQFPL-------------------LRLDRIYV----KNAS 226

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263
            SA      R W   SDH P+   + +
Sbjct: 227 ASAPTALPLRTWRHLSDHAPLSAEIHL 253


>gi|253570952|ref|ZP_04848360.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. 1_1_6]
 gi|251839901|gb|EES67984.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. 1_1_6]
          Length = 217

 Score = 44.0 bits (102), Expect = 0.022,   Method: Composition-based stats.
 Identities = 32/264 (12%), Positives = 62/264 (23%), Gaps = 58/264 (21%)

Query: 2   SVVTVATWNVNS--IRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57
           S + + TWN     +   I    L   +     +++ +QE    +   P +     +Y +
Sbjct: 8   SHMKICTWNSQGNPLNDAIKLNILNHLLTTEQCNVVMIQE--CGNFILPAQHSGRYHYVV 65

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
                                + +         ++         N  TL   +     G+
Sbjct: 66  VEHAGAYNCRCNTCIIADLNFVASIHYLISGTGRSAICLNYNGCNIYTLHCESGSGAVGD 125

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
                ++                      P I  GD N  P     Y  I+         
Sbjct: 126 IRDLVRHAVS-------------------PFIIGGDMNSTPSELSEYLRIMTTGTRSRPG 166

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
                                       + +           G  +D+ ++       L 
Sbjct: 167 NSANFACCGMP-----------------THFS----------GRELDYFLIDSRL--QLR 197

Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261
           +       R   K  DH PVI+ +
Sbjct: 198 TCV----RRYHMKGGDHYPVILEI 217


>gi|242239847|ref|YP_002988028.1| endonuclease/exonuclease/phosphatase [Dickeya dadantii Ech703]
 gi|242131904|gb|ACS86206.1| Endonuclease/exonuclease/phosphatase [Dickeya dadantii Ech703]
          Length = 253

 Score = 44.0 bits (102), Expect = 0.022,   Method: Composition-based stats.
 Identities = 27/247 (10%), Positives = 66/247 (26%), Gaps = 22/247 (8%)

Query: 15  RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKY 74
           R  +  L   ++  + D++ LQE +   +  P         H+E+     +      + +
Sbjct: 27  RFILPELREAVRSVSADVVFLQEVQGRHETHPL--------HVESWPDTPHYEFLAETMW 78

Query: 75  QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRF 134
                  +    + D     +      + + L I          +           +   
Sbjct: 79  NDYAYGRNAVYPEGDHGNAVLSRFPIFSYRNLDISLSEHERRG-LLYCVLKVPNRDLHLH 137

Query: 135 LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDA 194
           +      +            + +        P++   D    L+                
Sbjct: 138 VVCVHLGMSPHRQRQQMELLHTLLDTIPPDVPLVVAGDFNDWLQQATPDLNRYARLEEVF 197

Query: 195 IRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDH 254
            +        +         +     +R+D I +     ++  SA     P+ W+  SDH
Sbjct: 198 SQHYGKPARTF------PARFPL---LRLDRIYV----RNVRTSAPTLLGPKPWSHLSDH 244

Query: 255 TPVIVSL 261
            P+ V +
Sbjct: 245 APLAVEI 251


>gi|168044976|ref|XP_001774955.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673702|gb|EDQ60221.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 547

 Score = 44.0 bits (102), Expect = 0.022,   Method: Composition-based stats.
 Identities = 39/292 (13%), Positives = 72/292 (24%), Gaps = 60/292 (20%)

Query: 1   MSVVTVATWNV-------NSIRARIHNLAAWIKEN--NPDIICLQETK--TEDKNFPFET 49
           M  +++A+ NV         +R R   +          PDI+ LQE K   E+     + 
Sbjct: 140 MEPISLASLNVRCLGRGLAGVRKRRK-MKELFARVTPRPDILFLQEHKYSLEECQIRAQK 198

Query: 50  LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
           +  L Y       +        +    + +   L     +          +   Q + + 
Sbjct: 199 VDFLRYTSRWSDTRYSAARDSFTGGIGMLLSKKLAEQICEHGVI-----DSGRAQYVTLQ 253

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
             +      I  +      +   R     +   +L   L  +  +              W
Sbjct: 254 LSHNLKLGIINISDKQGGAATTGRGQNEITAWNDLTLFLELSDCFLNGHFRKVGNKLFTW 313

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
           +N       V                                           ID I L 
Sbjct: 314 DNGRQAPQMVCSC----------------------------------------IDRIYLP 333

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
                L     I +        SDH P+ V L+   P   +    + ++  I
Sbjct: 334 TAIHHLGGLTGIWS---SMPHISDHAPIFVKLNADRPPPPKPIRFNTHLLKI 382


>gi|225464293|ref|XP_002264857.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 546

 Score = 44.0 bits (102), Expect = 0.022,   Method: Composition-based stats.
 Identities = 10/33 (30%), Positives = 19/33 (57%), Gaps = 2/33 (6%)

Query: 9   WNVNSIRARIHN--LAAWIKENNPDIICLQETK 39
           WN   + +R     +  +++  NPD++ +QETK
Sbjct: 223 WNTRGLGSRNKRRVVKDFLRSKNPDVVMIQETK 255


>gi|311895579|dbj|BAJ27987.1| hypothetical protein KSE_21650 [Kitasatospora setae KM-6054]
          Length = 252

 Score = 44.0 bits (102), Expect = 0.022,   Method: Composition-based stats.
 Identities = 13/34 (38%), Positives = 21/34 (61%)

Query: 4  VTVATWNVNSIRARIHNLAAWIKENNPDIICLQE 37
          V V ++NV S+R     +A  I+   PD++C+QE
Sbjct: 21 VRVLSYNVRSLRDDRAAVARVIRACAPDVVCVQE 54


>gi|325292791|ref|YP_004278655.1| endonuclease/exonuclease/phosphatase family protein [Agrobacterium
           sp. H13-3]
 gi|325060644|gb|ADY64335.1| endonuclease/exonuclease/phosphatase family protein [Agrobacterium
           sp. H13-3]
          Length = 267

 Score = 44.0 bits (102), Expect = 0.022,   Method: Composition-based stats.
 Identities = 32/277 (11%), Positives = 73/277 (26%), Gaps = 30/277 (10%)

Query: 4   VTVATWNVNSIRARIHN-LAAWIKENNPDIICLQE-TKTEDKNFPFETLQSLNYHIETCG 61
           + +   N      ++H+ L  +I  ++PDI+CLQE   T      + + +     +    
Sbjct: 1   MRLICLN--GWGGKLHDELVPYISASDPDILCLQEVVHTPAAEEDWLSYRDDGRDL-PQR 57

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
                 V                GD    + R+             I  +    G     
Sbjct: 58  ANFLRDVEEALPDHLAIFCPASQGDLWHGETRYPSQWGLATFVRKSIAIVAQAQGFVHGC 117

Query: 122 TKYD-DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
              +        R                     + +  P+  ++       A   +++ 
Sbjct: 118 FSANGYGDHPRSRTGHAVRVFDFTTGQPAVIAHMHGLRDPNGKHDIPARLMQAKRLVKLV 177

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYS---------------FWDYYADSWSKNKGIRI-D 224
           +   +  +                ++               F D     ++K    R  D
Sbjct: 178 KDIAEDGDRIIVCGDFNVLPESDTFTVLKELDLIELVTTRGFTDTRTSHYAKQN--RFAD 235

Query: 225 HIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           +++++P     +         R     SDH P+++  
Sbjct: 236 YMLVNP-----VVQVDHFDVVRQPEV-SDHCPLLIEF 266


>gi|323357343|ref|YP_004223739.1| exonuclease III [Microbacterium testaceum StLB037]
 gi|323273714|dbj|BAJ73859.1| exonuclease III [Microbacterium testaceum StLB037]
          Length = 232

 Score = 44.0 bits (102), Expect = 0.022,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 11/51 (21%)

Query: 3  VVTVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTEDKNFPFET 49
          V+ V ++N      R H     L+  + E+  D++CLQE   + ++ P E 
Sbjct: 2  VMKVISYN-----LRKHRAAGELSRLVDEHAVDVLCLQE--CDTRDIPVEI 45


>gi|81299809|ref|YP_400017.1| hypothetical protein Synpcc7942_1000 [Synechococcus elongatus PCC
           7942]
 gi|81168690|gb|ABB57030.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942]
          Length = 1076

 Score = 44.0 bits (102), Expect = 0.022,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 28/69 (40%), Gaps = 9/69 (13%)

Query: 200 DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL--LHSARIDTKPRGWTKPSDHTPV 257
             +  Y+F       +  N    IDHI++S    +   +    ++T+     + SDH PV
Sbjct: 883 PENERYTFI------FQGNSQS-IDHILVSGSLANRAEIDIVNVNTEFAESLQASDHDPV 935

Query: 258 IVSLDIPEP 266
           +    I  P
Sbjct: 936 LARFTIAAP 944


>gi|56750554|ref|YP_171255.1| hypothetical protein syc0545_d [Synechococcus elongatus PCC 6301]
 gi|56685513|dbj|BAD78735.1| hypothetical protein [Synechococcus elongatus PCC 6301]
          Length = 1088

 Score = 44.0 bits (102), Expect = 0.022,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 28/69 (40%), Gaps = 9/69 (13%)

Query: 200 DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL--LHSARIDTKPRGWTKPSDHTPV 257
             +  Y+F       +  N    IDHI++S    +   +    ++T+     + SDH PV
Sbjct: 895 PENERYTFI------FQGNSQS-IDHILVSGSLANRAEIDIVNVNTEFAESLQASDHDPV 947

Query: 258 IVSLDIPEP 266
           +    I  P
Sbjct: 948 LARFTIAAP 956


>gi|298376208|ref|ZP_06986164.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 3_1_19]
 gi|298267245|gb|EFI08902.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 3_1_19]
          Length = 246

 Score = 44.0 bits (102), Expect = 0.023,   Method: Composition-based stats.
 Identities = 32/262 (12%), Positives = 64/262 (24%), Gaps = 49/262 (18%)

Query: 4   VTVATWNVN-SI----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           + + ++N+   I    +  +  +A  I +  PD + LQE                     
Sbjct: 26  LRIMSYNIRIGIGMDQQTNLKRIAEVINKIQPDYVGLQEV-----------------DSV 68

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
                  N  A L++   +  +     +           +         I         P
Sbjct: 69  CERSGWINQYAELARLTGMYPIFAPATERSKGLYGIAALSRKKPRSYQYIP--LPGKEEP 126

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
            T    +     +            L    +         +P         E D+     
Sbjct: 127 RTFLCLEYPNYTLCNTHFSLDPDSRLASIRLINETMKSENKPILITGDFNMEPDSKEFK- 185

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
             +   +L +    +   + H                     +R+D+I        L H 
Sbjct: 186 TMKQTWRLLSDPTLETYPSDHPR-------------------LRLDYIF-----GDLRHE 221

Query: 239 ARIDTKPRGWTKPSDHTPVIVS 260
            RI        + SDH P+ + 
Sbjct: 222 FRIINDQVIDIQSSDHLPIYID 243


>gi|212212637|ref|YP_002303573.1| endonuclease/exonuclease/phosphatase family protein [Coxiella
           burnetii CbuG_Q212]
 gi|212011047|gb|ACJ18428.1| endonuclease/exonuclease/phosphatase family protein [Coxiella
           burnetii CbuG_Q212]
          Length = 255

 Score = 44.0 bits (102), Expect = 0.023,   Method: Composition-based stats.
 Identities = 36/273 (13%), Positives = 67/273 (24%), Gaps = 44/273 (16%)

Query: 5   TVATWNVN-SIRARIHNLA-----AWIKENNPDIICLQET-----KTEDKNFPFETLQSL 53
           TV ++N++    AR            ++  + DI+ LQE      K+  K F    L   
Sbjct: 12  TVLSYNIHKGFSARYRRFVLPDIREALRAIDADIVLLQEVQGKHRKSRLKKFAHADL--- 68

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
                             SK+       +            +        + + + +L  
Sbjct: 69  ----------PQTEFIAESKWPHYMYGKNAVYGSAHHGNALLSNFPFKMVENINV-SLSQ 117

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
                I     D + +     +         E                   +        
Sbjct: 118 RASRSILHAIIDYEPTVELHVICIHLGLFRAERDYQLITL--SKRIEAHVPSHASLIIAG 175

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD---SWSKNKGIRIDHIMLSP 230
            F    R +F  ++       +    +  H  ++    A         +G+         
Sbjct: 176 DFNDWRRGAFNYMEKELELKEVYKVLEGKHAKTYPASRATLEVDRIYYRGL--------- 226

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                L S  I  +   W K SDH P+     I
Sbjct: 227 ----KLLSGEIFNESY-WKKLSDHLPLHAKFAI 254


>gi|145544246|ref|XP_001457808.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124425626|emb|CAK90411.1| unnamed protein product [Paramecium tetraurelia]
          Length = 239

 Score = 44.0 bits (102), Expect = 0.023,   Method: Composition-based stats.
 Identities = 41/269 (15%), Positives = 85/269 (31%), Gaps = 39/269 (14%)

Query: 4   VTVATWNVNSIR-------ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56
           + +AT+N   IR        R   L + I+  N D+I LQE        P     + +Y 
Sbjct: 1   MRIATYN---IRNTQDQYLKRREILQSIIQGLNADVISLQEV-----ALPELDYLAGDYQ 52

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                 +    +    +++       +          ++  +   N Q + IG++++ + 
Sbjct: 53  KFFAPIQLQFPLHPDPEFRIDGNAILVRKGLEVKLHEYVHISVFRNIQHIVIGDVHIYNT 112

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
           +       D   S     +         E      GD+N+ P+  +      +   + +T
Sbjct: 113 HLHHVIGDDQVRSHQIDNILTYLLGQMNERIF-LMGDFNLTPESQEYKKMTHYFKSS-YT 170

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
           L  ++  +     G T     T       +F                D+I +       +
Sbjct: 171 LANQKEPEITFPTGLTGPFMDTDPAG---TF----------------DYIWIRGNNIE-V 210

Query: 237 HSARID--TKPRGWTKPSDHTPVIVSLDI 263
               +    K +    PSDH  ++   +I
Sbjct: 211 KECTLFGSDKIQEGVYPSDHLGILGVYNI 239


>gi|308460342|ref|XP_003092476.1| hypothetical protein CRE_30476 [Caenorhabditis remanei]
 gi|308253162|gb|EFO97114.1| hypothetical protein CRE_30476 [Caenorhabditis remanei]
          Length = 923

 Score = 44.0 bits (102), Expect = 0.023,   Method: Composition-based stats.
 Identities = 33/260 (12%), Positives = 70/260 (26%), Gaps = 35/260 (13%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENN---PDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           + + T+N  S+ A  + LA  ++E N    DII L ETK                     
Sbjct: 21  LRICTFNCRSV-ATDNRLAELLEETNRIKYDIIGLSETK----------------RSAKV 63

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
              + +G  ++   +    V+   G  ++           I    +    L +       
Sbjct: 64  HMTNRDGTGVILGKRNNSSVSGGVGFIINKSLMPKIKEIKIVNHRIGYITLQVNKNQCTI 123

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
              Y     + +       + L  +        Y ++    +        N+        
Sbjct: 124 IQGYAPTAKYEEEEHSNFYENL-EDVYKSCKSRYKMVIGDFNARIGERKGNEVFIGPHSM 182

Query: 181 QSFQKLQN----MGFTDAIRATHDTHHLYSF--WDYYADSWSKNKGIRIDHIMLSPEATS 234
           +               + +   +      +   W Y +          +DHI+ +     
Sbjct: 183 EKRNDSGERLATFCEVNRVFHMNSQFIKATHRRWTYISPDKQHRHE--LDHILANG---K 237

Query: 235 LLHSARIDTKPRGWTKPSDH 254
            +    +      +T  SDH
Sbjct: 238 YITDVSV---VPSFTNGSDH 254


>gi|218549643|ref|YP_002383434.1| metal-dependent hydrolase [Escherichia fergusonii ATCC 35469]
 gi|218357184|emb|CAQ89819.1| putative metal-dependent hydrolase [Escherichia fergusonii ATCC
           35469]
          Length = 253

 Score = 44.0 bits (102), Expect = 0.023,   Method: Composition-based stats.
 Identities = 34/267 (12%), Positives = 64/267 (23%), Gaps = 32/267 (11%)

Query: 5   TVATWNVN-SI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN--YH 56
            V T N++        R  +  L   ++  + DI+CLQE            +++     H
Sbjct: 11  KVLTINIHKGFTAFNRRFILPELRDAVRTVSADIVCLQEV-MGAHEVHPLHVENWPDTSH 69

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
            E      ++  A        E               +     +++    R         
Sbjct: 70  YEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVP 129

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
                  +   +    R     +Q   L E +    D   +    D  +     N     
Sbjct: 130 PMTGKAIHVMCVHLGLREAHRQAQLAMLAEWVNELPDGEPVLVAGDFNDWRQKANHPLKV 189

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
                      +                                +R+D I +     +  
Sbjct: 190 QAGLDEIFTRAHGRPARTFPVQFPL-------------------LRLDRIYV----KNAS 226

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263
            SA      R W   SDH P+   + +
Sbjct: 227 ASAPTALPLRTWRHLSDHAPLSAEIHL 253


>gi|254563795|ref|YP_003070890.1| hypothetical protein METDI5472 [Methylobacterium extorquens DM4]
 gi|254271073|emb|CAX27080.1| conserved hypothetical protein [Methylobacterium extorquens DM4]
          Length = 259

 Score = 44.0 bits (102), Expect = 0.023,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 6/39 (15%)

Query: 5  TVATWNVNSIR---ARIHNLAAWIKENNPDIICLQE-TK 39
           + +WN+  +R   A +  L A I++  PD + +QE TK
Sbjct: 19 KIVSWNL--LRRTGAAVDCLVALIEQERPDFLLMQEATK 55


>gi|218532778|ref|YP_002423594.1| endonuclease/exonuclease/phosphatase [Methylobacterium
          chloromethanicum CM4]
 gi|218525081|gb|ACK85666.1| Endonuclease/exonuclease/phosphatase [Methylobacterium
          chloromethanicum CM4]
          Length = 259

 Score = 44.0 bits (102), Expect = 0.023,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 6/39 (15%)

Query: 5  TVATWNVNSIR---ARIHNLAAWIKENNPDIICLQE-TK 39
           + +WN+  +R   A +  L A I++  PD + +QE TK
Sbjct: 19 KIVSWNL--LRRTGAAVDCLVALIEQERPDFLLMQEATK 55


>gi|163853833|ref|YP_001641876.1| endonuclease/exonuclease/phosphatase [Methylobacterium extorquens
          PA1]
 gi|163665438|gb|ABY32805.1| Endonuclease/exonuclease/phosphatase [Methylobacterium extorquens
          PA1]
          Length = 259

 Score = 44.0 bits (102), Expect = 0.023,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 6/39 (15%)

Query: 5  TVATWNVNSIR---ARIHNLAAWIKENNPDIICLQE-TK 39
           + +WN+  +R   A +  L A I++  PD + +QE TK
Sbjct: 19 KIVSWNL--LRRTGAAVDCLVALIEQERPDFLLMQEATK 55


>gi|260910352|ref|ZP_05917025.1| endonuclease/exonuclease/phosphatase [Prevotella sp. oral taxon 472
           str. F0295]
 gi|260635535|gb|EEX53552.1| endonuclease/exonuclease/phosphatase [Prevotella sp. oral taxon 472
           str. F0295]
          Length = 310

 Score = 44.0 bits (102), Expect = 0.023,   Method: Composition-based stats.
 Identities = 35/280 (12%), Positives = 68/280 (24%), Gaps = 57/280 (20%)

Query: 21  LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80
           +A  +  ++PD    QE                +Y     G+         +        
Sbjct: 54  IADQLNYHHPDAFGAQEV--LKGQLDDMLRALPDYDYVGVGRDDGREAGEYAPIFYRRDR 111

Query: 81  THLPGD-DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFAS 139
               GD    +   + + +   +   +RI                   +      ++   
Sbjct: 112 LDKLGDGYFWLSPTYTKPSLGWDAACIRICTWAKFKVRESGKVFLFFNLHTDHVGVKARR 171

Query: 140 QRLE-----------LEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN 188
           +  +            + P++  GD+N+                A        +  +   
Sbjct: 172 ESAKLVMKAIEGLGGKDMPVVLTGDFNVDQTDETYAIFTAN---ARLNDAYVVAKHRFAE 228

Query: 189 MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT--------------- 233
            G  ++   T  T                    RIDHI +SP  +               
Sbjct: 229 NGTFNSFNPTLKTT------------------SRIDHIFVSPRFSVARYAVLPNFYWTEE 270

Query: 234 -----SLLHSA--RIDTKPRGWTKPSDHTPVIVSLDIPEP 266
                     A  +ID K       SDH PV   +++   
Sbjct: 271 PATKSQKGQDAPQQIDLKQHQLRTASDHYPVFAEINLNSK 310


>gi|189192006|ref|XP_001932342.1| inositol phosphosphingolipids phospholipase C [Pyrenophora
           tritici-repentis Pt-1C-BFP]
 gi|187973948|gb|EDU41447.1| inositol phosphosphingolipids phospholipase C [Pyrenophora
           tritici-repentis Pt-1C-BFP]
          Length = 429

 Score = 44.0 bits (102), Expect = 0.023,   Method: Composition-based stats.
 Identities = 46/323 (14%), Positives = 76/323 (23%), Gaps = 57/323 (17%)

Query: 2   SVVTVATWNVNSIR----ARIHNLAAW---IKEN--NPDIICLQETKTEDK--NFPFETL 50
           S + V + N   ++     R   L      I      PDI+ LQE  T+        +T 
Sbjct: 10  SSLRVISLNCWGLKFISTLRNERLTEIGVQIAAASPRPDIVGLQECWTQQDYNVIREKTQ 69

Query: 51  QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
             L Y           G+ ILS++  IE        +    A +    F      +    
Sbjct: 70  HILPYGKFYHSGIFGGGLVILSRWPIIESNMVRYPLNGRPAAFYRGDWFVAQAWEIT--- 126

Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170
                        +          +  +     +E        + I+             
Sbjct: 127 ---KLMRGAAERGHLVIGMGDFNMVPLSLAHRIIETHSPVRDVWRILHPESSIGAAKDKV 183

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF-WDYYADSW-------------S 216
                       F    N    D+           S+ W+                    
Sbjct: 184 EQLRGVPMPSAQFNMTVNGATCDSELN--------SWRWNKQQQKRLTKGENVQIDPAVP 235

Query: 217 KNKGIRIDHIMLS-----------PEATSLLHSARI---DTKPRGWTKPSDHTPVIVSLD 262
                R+D++  S             A   L  A +      P      SDH  V  +L 
Sbjct: 236 DPNAKRLDYVFFSSGRYHNPETKEETAEWELKEANVGMEMRHPTLHCSLSDHFSVEATLT 295

Query: 263 ----IPEPRKKQQDSTSQNMKPI 281
                P   +    +  +   PI
Sbjct: 296 RSVVAPSAVELPPSALPERYLPI 318


>gi|71064661|ref|YP_263388.1| hypothetical protein Psyc_0080 [Psychrobacter arcticus 273-4]
 gi|71037646|gb|AAZ17954.1| conserved hypothetical protein [Psychrobacter arcticus 273-4]
          Length = 302

 Score = 44.0 bits (102), Expect = 0.023,   Method: Composition-based stats.
 Identities = 32/265 (12%), Positives = 64/265 (24%), Gaps = 57/265 (21%)

Query: 18  IHNLAAWIKENNPDIICLQETKTE-----------DKNFPFETL-------QSLNYHIET 59
           +  +A  +     DI+CLQE + +                 E          S   + E 
Sbjct: 77  VQGIAQALDIIGSDILCLQEVQGQNLKRNIQYNEYPDQSQHEWFGEYLQLENSYGKNSEY 136

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
                 N V       P   V               E         + +   +L      
Sbjct: 137 ENGHHGNAVLSRFPLDPKHNVNITVNKLEQRGVLHCEVQPVGWNVPVVVLCAHLNLFERD 196

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +Y+  +++++  +      +   +                      W+  +C  L  
Sbjct: 197 RIKQYEAIVNYVRDEIAPDQPLILAGDFND-------------------WKKMSCDKLAS 237

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
                +         +        + S                +D I +       +  A
Sbjct: 238 NLGMTEAFKHCHGKLLPTFPAKLPVLS----------------LDRIYV-RNL--RIKDA 278

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIP 264
            + T    W+  SDH P+   L +P
Sbjct: 279 WVHTGK-PWSTLSDHLPLSAELALP 302


>gi|320104208|ref|YP_004179799.1| endonuclease/exonuclease/phosphatase [Isosphaera pallida ATCC
           43644]
 gi|319751490|gb|ADV63250.1| Endonuclease/exonuclease/phosphatase [Isosphaera pallida ATCC
           43644]
          Length = 271

 Score = 44.0 bits (102), Expect = 0.024,   Method: Composition-based stats.
 Identities = 40/278 (14%), Positives = 81/278 (29%), Gaps = 37/278 (13%)

Query: 4   VTVATWNV------NSIRA---RIHNLAAWIKENNPDIICLQ-------ETKTEDKNFPF 47
           + V T+N+      +   A   R   +   + +++PD++ LQ       ET    +  P 
Sbjct: 9   LKVLTFNLRYADAADGPNAWPNRREAVKQVLIDHDPDLVLLQEALAVQVETVC--EALPG 66

Query: 48  ETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI---NTQ 104
                   +      +    +    +++     T    D  D       +          
Sbjct: 67  HLAVGSGRNDGRDDGEFVPILIRARRFRLETARTFWLSDTPDQPGSISRSWGNHLPRIGV 126

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
            +R+ +        + +   D   +  +R     +        +                
Sbjct: 127 EVRLVDRLGGRRWVVGNLHLDHDSAEARRRGLDLAVDRLTAAAVASGD----------PR 176

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRID 224
             ++   D     E     + L          A      + +  D+         G RID
Sbjct: 177 VLLLMGGDFNAPTEDNTLRRHLGEGFIDLVTAADPSLAAVGTRHDFLGQG-----GPRID 231

Query: 225 HIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
           H+ L     + + +A IDT+P     PSDH PV   ++
Sbjct: 232 HLWLRGGEFTPI-AAGIDTRPMLERMPSDHHPVWAVVE 268


>gi|108708285|gb|ABF96080.1| Endonuclease/Exonuclease/phosphatase family protein, expressed
           [Oryza sativa Japonica Group]
          Length = 523

 Score = 44.0 bits (102), Expect = 0.024,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 75/251 (29%), Gaps = 16/251 (6%)

Query: 16  ARIHNLAAWIKENNPDIICLQETKTEDKN---FPFETLQSLNY-HIETCGQKSYNGVAIL 71
           AR  ++A  ++E   D++ LQ  + E+        E  + L   ++         G A+L
Sbjct: 245 ARRRSVAEALREAGADMVALQNVRAEEGRGMRPLSELAEGLGMRYVFAESWAPEYGNAVL 304

Query: 72  SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWI 131
           S++           D  D +              + +   +L H +     K  D I   
Sbjct: 305 SRWPIKRWNARRLADHFDFRNVMRATIEVPGAGEVNLYCTHLDHLDEGLRMKQVDSILRF 364

Query: 132 KRFLRFASQR--LELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNM 189
                         L+     A  +  I + H+       +++    L+ ++        
Sbjct: 365 ADGHHHILAGGLNALDASDYSADRWAAIAKYHEEIGKPPPKSEVMRHLKAKRYVDAKDFA 424

Query: 190 GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT 249
           G  DA              D          G R+D+I+ SP +                 
Sbjct: 425 GGRDAGLVVVPNGQ-----DVQGTCK---YGTRVDYILASPNSPYNFVPGS--YAVVPSM 474

Query: 250 KPSDHTPVIVS 260
             SDH  V+V 
Sbjct: 475 GTSDHHIVMVD 485


>gi|309782328|ref|ZP_07677055.1| endonuclease/exonuclease/phosphatase [Ralstonia sp. 5_7_47FAA]
 gi|308918946|gb|EFP64616.1| endonuclease/exonuclease/phosphatase [Ralstonia sp. 5_7_47FAA]
          Length = 287

 Score = 44.0 bits (102), Expect = 0.024,   Method: Composition-based stats.
 Identities = 46/285 (16%), Positives = 86/285 (30%), Gaps = 34/285 (11%)

Query: 6   VATWNVNSIRARIHN--LAAWIKENN----PDIICLQETKTEDKNFP--------FETLQ 51
           + TWN+   R    +  LA  +K+       D++CLQE  +   + P         E   
Sbjct: 5   ILTWNIQWGRGADGHVSLARQLKQAREMAEFDVLCLQEVTSGFSDLPGQPGADQWSELAD 64

Query: 52  SLNYHI--------------ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA 97
           +L                        +     +   Y     +   P     +    IEA
Sbjct: 65  ALGSEYTVIGGFALERHNGAHVQRFGNAIATRLPVHYIQRHALPCPPDTTPYMPRMAIEA 124

Query: 98  TFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII 157
                   LRI   +L + + +      D +  I       + +         AG +  +
Sbjct: 125 IVQAAFGALRIVTTHLEYYSELQRVAQIDALRAIHTEGCARANQPARLGAEPEAGPFRPL 184

Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWS 216
            Q         +   A    +   +    +     DA    H  T    +F  Y    W+
Sbjct: 185 AQTKATIICGDFNCKADSMPKRLATAPFAREPALHDAWEIAHGATPQPPTFGVYDRADWT 244

Query: 217 KNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           +      D +++S      +    I++     T+ SDH P+++ L
Sbjct: 245 EPAYA-CDFMLISEPLKPRVLRLEINSA----TQASDHQPMLLEL 284


>gi|168035674|ref|XP_001770334.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162678365|gb|EDQ64824.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 623

 Score = 44.0 bits (102), Expect = 0.024,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 40/128 (31%), Gaps = 17/128 (13%)

Query: 147 PLIFAGDYNIIPQPHDCYNPIIWENDACFTL-----EVRQSFQKLQNMGFTDAIRATHDT 201
                 +  I  Q H   +  + +  +         E         N   TD  +     
Sbjct: 439 WHKLVSNLPINCQWHIAGDFNMMDKSSQCGRLLSGGEKFAWESFRSNFQVTDPFKFQGKL 498

Query: 202 HHLYSFWDYYADSWSKNKGIRIDHIMLS----PEATSLLHSARIDTKPRGWTKPSDHTPV 257
              ++ WD       +  G R+D   LS    P+ ++ +    I     G    SDH PV
Sbjct: 499 --RFT-WDNQHKDGCRIPG-RLDRYYLSESQNPDFSAAVKECAIL----GANTISDHHPV 550

Query: 258 IVSLDIPE 265
            + L + +
Sbjct: 551 RLELALTD 558


>gi|70733598|ref|YP_257238.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           fluorescens Pf-5]
 gi|68347897|gb|AAY95503.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           fluorescens Pf-5]
          Length = 292

 Score = 44.0 bits (102), Expect = 0.024,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 14/59 (23%)

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
           +F  +            +DHI+LSP  T  L    +  +P      SDH PV V + +P
Sbjct: 228 TFPSWRPQ-------RCLDHILLSPSLT--LERVEVLAQP-----ISDHLPVAVEIRLP 272


>gi|170693030|ref|ZP_02884191.1| Endonuclease/exonuclease/phosphatase [Burkholderia graminis C4D1M]
 gi|170142028|gb|EDT10195.1| Endonuclease/exonuclease/phosphatase [Burkholderia graminis C4D1M]
          Length = 292

 Score = 44.0 bits (102), Expect = 0.024,   Method: Composition-based stats.
 Identities = 8/38 (21%), Positives = 16/38 (42%), Gaps = 4/38 (10%)

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           D + ++ +    +    +D   R     SDH P+ + L
Sbjct: 258 DFVFVTEDLAPRVACCEVDAHSRS----SDHQPMWLEL 291


>gi|241662748|ref|YP_002981108.1| endonuclease/exonuclease/phosphatase [Ralstonia pickettii 12D]
 gi|240864775|gb|ACS62436.1| Endonuclease/exonuclease/phosphatase [Ralstonia pickettii 12D]
          Length = 287

 Score = 44.0 bits (102), Expect = 0.024,   Method: Composition-based stats.
 Identities = 46/285 (16%), Positives = 86/285 (30%), Gaps = 34/285 (11%)

Query: 6   VATWNVNSIRARIHN--LAAWIKENN----PDIICLQETKTEDKNFP--------FETLQ 51
           + TWN+   R    +  LA  +K+       D++CLQE  +   + P         E   
Sbjct: 5   ILTWNIQWGRGADGHVSLARQLKQAREMAEFDVLCLQEVTSGFSDLPGQPGADQWSELAD 64

Query: 52  SLNYHI--------------ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA 97
           +L                        +     +   Y     +   P     +    IEA
Sbjct: 65  ALGSEYTVIGGFALERHNGAHVQRFGNAIATRLPVHYIQRHALPCPPDTTPYMPRMAIEA 124

Query: 98  TFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII 157
                   LRI   +L + + +      D +  I       + +         AG +  +
Sbjct: 125 IVQAAFGALRIVTTHLEYYSELQRVAQIDALRAIHTEGCARANQPATLGAEPEAGPFRPL 184

Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWS 216
            Q         +   A    +   +    +     DA    H  T    +F  Y    W+
Sbjct: 185 AQTKATIICGDFNCKADSMPKRLATAPFAREPALHDAWEIAHGATPQPPTFGVYDRADWT 244

Query: 217 KNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           +      D +++S      +    I++     T+ SDH P+++ L
Sbjct: 245 EPAYA-CDFMLISEPLKPRVLRLEINSA----TQASDHQPMLLEL 284


>gi|150008523|ref|YP_001303266.1| hypothetical protein BDI_1909 [Parabacteroides distasonis ATCC
           8503]
 gi|256841460|ref|ZP_05546967.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|149936947|gb|ABR43644.1| conserved hypothetical protein [Parabacteroides distasonis ATCC
           8503]
 gi|256737303|gb|EEU50630.1| conserved hypothetical protein [Parabacteroides sp. D13]
          Length = 246

 Score = 44.0 bits (102), Expect = 0.024,   Method: Composition-based stats.
 Identities = 33/262 (12%), Positives = 68/262 (25%), Gaps = 49/262 (18%)

Query: 4   VTVATWNVN-SI----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           + + ++N+   I    +  +  +A  I +  PD + LQE                     
Sbjct: 26  LRIMSYNIRIGIGMDQQTNLKRIAEVINKIQPDYVGLQEV-----------------DSV 68

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
                  N  A L++   +  +     +           +         I         P
Sbjct: 69  CERSGWINQYAELARLTGMYPIFAPATERSKGLYGIAALSRKKPRSYQYIP--LPGKEEP 126

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
            T    +     +            L    +         +P         E D+     
Sbjct: 127 RTFLCLEYPNYTLCNTHFSLDPDSRLASIRLINETMKSENKPILITGDFNMEPDSKEFKA 186

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           ++Q+++ L +    +   + H                     +R+D+I        L H 
Sbjct: 187 MKQTWRLLSD-PTLETYPSDHPR-------------------LRLDYIF-----GDLRHE 221

Query: 239 ARIDTKPRGWTKPSDHTPVIVS 260
            RI        + SDH P+ + 
Sbjct: 222 FRIINDQVIDIQSSDHLPIYID 243


>gi|325185771|emb|CCA20275.1| pollike protein putative [Albugo laibachii Nc14]
          Length = 933

 Score = 44.0 bits (102), Expect = 0.024,   Method: Composition-based stats.
 Identities = 43/271 (15%), Positives = 79/271 (29%), Gaps = 22/271 (8%)

Query: 7   ATWNVNSIRARIHNLAA-WIKENNPDIICLQETKTEDKN---FPFETLQSLNYHIETCGQ 62
            + N+N +      L    +       I LQET+   ++         +S+N +  T   
Sbjct: 318 LSLNINGLNKPHPTLYRTLLSRYQS--IALQETRLSSEDNRRINEHFFRSVNAN-ATLFW 374

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
                 +   +     +++        V          ++ + L +    L     I   
Sbjct: 375 SPCPASSSKGRNGVGLLLSSAHPFGPVVNITARHLPSALHDRYLILDTSILSQRVWIHVV 434

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
               + S   +F       L  +   I  GD+N+   P    + +           +   
Sbjct: 435 YAPAQSSDQIQFFTSLPTDLPRDVQHIVLGDFNVPLDPTLDLSHLRPAGTN-----IDAF 489

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
            Q   ++G  DA R TH +   Y+               R+D+  LS E         I 
Sbjct: 490 LQWNLHLGLVDAWRLTHPSVQEYT-----GPGRRN----RLDYCFLSTELFQSSL-THIA 539

Query: 243 TKPRGWTKPSDHTPVIVSLDIPEPRKKQQDS 273
                    +DH PV   L  P+     +  
Sbjct: 540 HDHLTQYHLADHLPVTFLLQHPDHPGHSRQP 570


>gi|307718261|ref|YP_003873793.1| endonuclease/exonuclease/phosphatase family protein [Spirochaeta
           thermophila DSM 6192]
 gi|306531986|gb|ADN01520.1| endonuclease/exonuclease/phosphatase family protein [Spirochaeta
           thermophila DSM 6192]
          Length = 311

 Score = 44.0 bits (102), Expect = 0.024,   Method: Composition-based stats.
 Identities = 29/269 (10%), Positives = 63/269 (23%), Gaps = 48/269 (17%)

Query: 17  RIHNLAAWIKENNPDIICLQET---KTEDKNFPFETLQSLNYHIETCGQKS---YNGVAI 70
           R+  ++  ++  + D++ LQE    +          L    Y      ++    +  V  
Sbjct: 60  RLEAVSRVVRSLDADVLILQEVENERVL-GRLVSGYLADAGYRWHFLPEEEGAVHVAVLS 118

Query: 71  LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISW 130
               + + +          +++           Q    G   +    P    +      +
Sbjct: 119 RIPVEGVRVHALKDPRVAALRSVVEVEYRLGGEQVFLFGVHLISRAGPAWRDEIRRNQLF 178

Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG 190
           +        +R      ++  GD+                          ++        
Sbjct: 179 LIARRLEEIRRTAPGVHVLVGGDF--------------NMEADAVETFFDRALFPQDVHS 224

Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS----LLHSARI----- 241
               +         Y    +Y   W      RID    +          +    +     
Sbjct: 225 VWSMMVPGTMPPGSY----WYEGRWE-----RIDGFFFTEGLRDGVGLDVTGGEVVAFPW 275

Query: 242 DTKPRG---------WTKPSDHTPVIVSL 261
               RG          +  SDH PV V L
Sbjct: 276 LLDERGRPWSWDMGTGSGYSDHLPVKVIL 304


>gi|260854081|ref|YP_003227972.1| putative DNase [Escherichia coli O26:H11 str. 11368]
 gi|257752730|dbj|BAI24232.1| predicted DNase [Escherichia coli O26:H11 str. 11368]
 gi|323155689|gb|EFZ41860.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia
           coli EPECa14]
          Length = 253

 Score = 44.0 bits (102), Expect = 0.024,   Method: Composition-based stats.
 Identities = 33/267 (12%), Positives = 64/267 (23%), Gaps = 32/267 (11%)

Query: 5   TVATWNVN-SI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN--YH 56
            V T N++        R  +  L   ++  + DI+CLQE            +++     H
Sbjct: 11  KVLTINIHKGFTAFNRRFILPELRDAVRTVSADIVCLQEV-MGAHEVHPLHVENWPDTSH 69

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
            E      ++  A        +               +     +++    R         
Sbjct: 70  YEFLADTMWSDFAYGRNAVYPKGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVP 129

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
                  +   +    R     +Q   L E +    D   +    D  +     N     
Sbjct: 130 PMTGKAIHVMCVHLGLREAHRQAQLAMLAEWVNELPDGEPVLVAGDFNDWRQKANHPLKV 189

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
                      +                                +R+D I +     +  
Sbjct: 190 QAGLDEIFTRAHGRPARTFPVQFPL-------------------LRLDRIYV----KNAS 226

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263
            SA      R W   SDH P+   + +
Sbjct: 227 ASAPTALPLRTWRHLSDHAPLSAEIHL 253


>gi|157158045|ref|YP_001461980.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli E24377A]
 gi|300822925|ref|ZP_07103060.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 119-7]
 gi|300922814|ref|ZP_07138900.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 182-1]
 gi|301327982|ref|ZP_07221147.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 78-1]
 gi|331667154|ref|ZP_08368019.1| putative cytoplasmic protein [Escherichia coli TA271]
 gi|331676525|ref|ZP_08377221.1| putative cytoplasmic protein [Escherichia coli H591]
 gi|157080075|gb|ABV19783.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli E24377A]
 gi|300420846|gb|EFK04157.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 182-1]
 gi|300524466|gb|EFK45535.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 119-7]
 gi|300845547|gb|EFK73307.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 78-1]
 gi|320198979|gb|EFW73576.1| Endonuclease/Exonuclease/phosphatase family protein [Escherichia
           coli EC4100B]
 gi|331065510|gb|EGI37403.1| putative cytoplasmic protein [Escherichia coli TA271]
 gi|331075214|gb|EGI46512.1| putative cytoplasmic protein [Escherichia coli H591]
          Length = 253

 Score = 44.0 bits (102), Expect = 0.024,   Method: Composition-based stats.
 Identities = 34/267 (12%), Positives = 64/267 (23%), Gaps = 32/267 (11%)

Query: 5   TVATWNVN-SI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN--YH 56
            V T N++        R  +  L   ++  + DI+CLQE            +++     H
Sbjct: 11  KVLTINIHKGFTAFNRRFILPELRDAVRTVSADIVCLQEV-MGAHEVHPLHVENWPDTSH 69

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
            E      ++  A        E               +     +++    R         
Sbjct: 70  YEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVP 129

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
                  +   +    R     +Q   L E +    D   +    D  +     N     
Sbjct: 130 PMTGKAIHVMCVHLGLREAHRQAQLAMLAEWVNELPDGEPVLVAGDFNDWRQKANHPLKV 189

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
                      +                                +R+D I +     +  
Sbjct: 190 QAGLDEIFTRVHGRPARTFPVQFPL-------------------LRLDRIYV----KNAS 226

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263
            SA      R W   SDH P+   + +
Sbjct: 227 ASAPTALPLRTWRHLSDHAPLSAEIHL 253


>gi|254260300|ref|ZP_04951354.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 1710a]
 gi|254218989|gb|EET08373.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 1710a]
          Length = 305

 Score = 44.0 bits (102), Expect = 0.025,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 4/38 (10%)

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           D   ++      L    ID    G  + SDH P+++ L
Sbjct: 269 DFAFVTDTLVRRLSRCEID----GTVRASDHQPIVLEL 302


>gi|242317310|ref|ZP_04816326.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 1106b]
 gi|242140549|gb|EES26951.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 1106b]
          Length = 305

 Score = 44.0 bits (102), Expect = 0.025,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 4/38 (10%)

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           D   ++      L    ID    G  + SDH P+++ L
Sbjct: 269 DFAFVTDTLVRRLSRCEID----GTVRASDHQPIVLEL 302


>gi|237727294|ref|ZP_04557775.1| conserved hypothetical protein [Bacteroides sp. D4]
 gi|229434150|gb|EEO44227.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
          Length = 334

 Score = 44.0 bits (102), Expect = 0.025,   Method: Composition-based stats.
 Identities = 35/257 (13%), Positives = 66/257 (25%), Gaps = 37/257 (14%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKE---NNPDIICLQE---TKTEDKNFPFETLQSLNYHI 57
           + +  WN    R     LA  I       P I+CLQE   T     +          Y I
Sbjct: 96  LKLVCWNAEGFRLNKDTLAKAIHSIRILQPGIVCLQERPHTNLLAWDTIRAAFPDYPYCI 155

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
               +     +A+ S++    +  +   D  +   +          +   +       G 
Sbjct: 156 VNSREDEILNLAVFSRWPVGNVQEYYFPDSYNKMLQADIRMIGQTFRLFNVH--LQTTGM 213

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
             +S+  D   +     +R   Q   L   +  +    I+    +             +L
Sbjct: 214 NESSSMKDRLQTMRHHAIRRNRQADLLANAIAESPYPVIVCGDFNDTPASYVYRKISRSL 273

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
           +           G                              +RID+ + SP       
Sbjct: 274 QDCFLQAGRTWKGSYQRWGDF----------------------LRIDYTLCSPAF----- 306

Query: 238 SARIDTKPRGWTKPSDH 254
             +++         SDH
Sbjct: 307 --QVNCYQLVSNPWSDH 321


>gi|53726143|ref|YP_103011.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           mallei ATCC 23344]
 gi|52429566|gb|AAU50159.1| endonuclease/exonuclease/phosphatase family superfamily
           [Burkholderia mallei ATCC 23344]
          Length = 324

 Score = 44.0 bits (102), Expect = 0.025,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 4/38 (10%)

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           D   ++      L    ID    G  + SDH P+++ L
Sbjct: 288 DFAFVTDTLVRRLSRCEID----GTVRASDHQPIVLEL 321


>gi|126438983|ref|YP_001059231.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 668]
 gi|126218476|gb|ABN81982.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 668]
          Length = 286

 Score = 44.0 bits (102), Expect = 0.025,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 4/38 (10%)

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           D   ++      L    ID    G  + SDH P+++ L
Sbjct: 250 DFAFVTDTLVRRLSRCEID----GTVRASDHQPIVLEL 283


>gi|76808611|ref|YP_333756.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 1710b]
 gi|237812555|ref|YP_002897006.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei MSHR346]
 gi|254179545|ref|ZP_04886144.1| endonuclease/exonuclease/phosphatase family superfamily
           [Burkholderia pseudomallei 1655]
 gi|254189064|ref|ZP_04895575.1| endonuclease/exonuclease/phosphatase family superfamily
           [Burkholderia pseudomallei Pasteur 52237]
 gi|76578064|gb|ABA47539.1| endonuclease/exonuclease/phosphatase family superfamily
           [Burkholderia pseudomallei 1710b]
 gi|157936743|gb|EDO92413.1| endonuclease/exonuclease/phosphatase family superfamily
           [Burkholderia pseudomallei Pasteur 52237]
 gi|184210085|gb|EDU07128.1| endonuclease/exonuclease/phosphatase family superfamily
           [Burkholderia pseudomallei 1655]
 gi|237503102|gb|ACQ95420.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei MSHR346]
          Length = 286

 Score = 44.0 bits (102), Expect = 0.025,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 4/38 (10%)

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           D   ++      L    ID    G  + SDH P+++ L
Sbjct: 250 DFAFVTDTLVRRLSRCEID----GTVRASDHQPIVLEL 283


>gi|121601098|ref|YP_993160.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           mallei SAVP1]
 gi|121229908|gb|ABM52426.1| endonuclease/exonuclease/phosphatase family superfamily
           [Burkholderia mallei SAVP1]
          Length = 286

 Score = 44.0 bits (102), Expect = 0.025,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 4/38 (10%)

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           D   ++      L    ID    G  + SDH P+++ L
Sbjct: 250 DFAFVTDTLVRRLSRCEID----GTVRASDHQPIVLEL 283


>gi|53719141|ref|YP_108127.1| hypothetical protein BPSL1507 [Burkholderia pseudomallei K96243]
 gi|67639890|ref|ZP_00438719.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           mallei GB8 horse 4]
 gi|124383859|ref|YP_001026065.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           mallei NCTC 10229]
 gi|126449985|ref|YP_001080667.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           mallei NCTC 10247]
 gi|126454152|ref|YP_001066498.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 1106a]
 gi|134277293|ref|ZP_01764008.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 305]
 gi|167002249|ref|ZP_02268039.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           mallei PRL-20]
 gi|167845399|ref|ZP_02470907.1| endonuclease/exonuclease/phosphatase family superfamily protein
           [Burkholderia pseudomallei B7210]
 gi|167902390|ref|ZP_02489595.1| endonuclease/exonuclease/phosphatase family superfamily protein
           [Burkholderia pseudomallei NCTC 13177]
 gi|167910632|ref|ZP_02497723.1| endonuclease/exonuclease/phosphatase family superfamily protein
           [Burkholderia pseudomallei 112]
 gi|217421528|ref|ZP_03453032.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 576]
 gi|226197165|ref|ZP_03792742.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei Pakistan 9]
 gi|254178197|ref|ZP_04884852.1| endonuclease/exonuclease/phosphatase family superfamily
           [Burkholderia mallei ATCC 10399]
 gi|254197468|ref|ZP_04903890.1| endonuclease/exonuclease/phosphatase family superfamily
           [Burkholderia pseudomallei S13]
 gi|254199957|ref|ZP_04906323.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           mallei FMH]
 gi|254206290|ref|ZP_04912642.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           mallei JHU]
 gi|254297422|ref|ZP_04964875.1| endonuclease/exonuclease/phosphatase family superfamily
           [Burkholderia pseudomallei 406e]
 gi|254358295|ref|ZP_04974568.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           mallei 2002721280]
 gi|52209555|emb|CAH35508.1| conserved hypothetical protein [Burkholderia pseudomallei K96243]
 gi|124291879|gb|ABN01148.1| endonuclease/exonuclease/phosphatase family superfamily
           [Burkholderia mallei NCTC 10229]
 gi|126227794|gb|ABN91334.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 1106a]
 gi|126242855|gb|ABO05948.1| endonuclease/exonuclease/phosphatase family superfamily
           [Burkholderia mallei NCTC 10247]
 gi|134250943|gb|EBA51022.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 305]
 gi|147749553|gb|EDK56627.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           mallei FMH]
 gi|147753733|gb|EDK60798.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           mallei JHU]
 gi|148027422|gb|EDK85443.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           mallei 2002721280]
 gi|157807264|gb|EDO84434.1| endonuclease/exonuclease/phosphatase family superfamily
           [Burkholderia pseudomallei 406e]
 gi|160699236|gb|EDP89206.1| endonuclease/exonuclease/phosphatase family superfamily
           [Burkholderia mallei ATCC 10399]
 gi|169654209|gb|EDS86902.1| endonuclease/exonuclease/phosphatase family superfamily
           [Burkholderia pseudomallei S13]
 gi|217395270|gb|EEC35288.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei 576]
 gi|225930544|gb|EEH26554.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           pseudomallei Pakistan 9]
 gi|238520501|gb|EEP83960.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           mallei GB8 horse 4]
 gi|243062066|gb|EES44252.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
           mallei PRL-20]
          Length = 286

 Score = 44.0 bits (102), Expect = 0.025,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 4/38 (10%)

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           D   ++      L    ID    G  + SDH P+++ L
Sbjct: 250 DFAFVTDTLVRRLSRCEID----GTVRASDHQPIVLEL 283


>gi|321249742|ref|XP_003191557.1| phospholipase C [Cryptococcus gattii WM276]
 gi|317458024|gb|ADV19770.1| phospholipase C, putative [Cryptococcus gattii WM276]
          Length = 529

 Score = 44.0 bits (102), Expect = 0.025,   Method: Composition-based stats.
 Identities = 40/245 (16%), Positives = 71/245 (28%), Gaps = 28/245 (11%)

Query: 15  RARIHNLAAWIKENNPDIICLQETKT-EDKNFPFETLQS-LNYHIETCGQKSYNGVAILS 72
           R RI  +A ++  ++ DI+CLQE    +D     E +Q  L +          +G+AI +
Sbjct: 32  RTRIQAIAEYMASSSYDIVCLQELWIYKDYEVVREEVQGNLPFSRFFHTGALGSGLAIFT 91

Query: 73  KYQPIEIV-----------THLPGDDLDVQARFIEATFTINTQTLRIGNLYLP-HGNPIT 120
           ++  I                  GD    +A             + I N ++   G    
Sbjct: 92  RFPLIAAHALPYSLSGSPAQAFAGDFFVKKAAGNVVILHPVLGEVEIWNTHMHAAGEHPP 151

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
            T+   +I+   +              +   GD+N  P            +      +V 
Sbjct: 152 DTRQAHRIAQSWQLANAVRGGAAKGRYVFVMGDFNSQPWSIPIAMMRDHAHLTDSFAQVH 211

Query: 181 ------QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK----GIRIDHIMLSP 230
                  S                    + YS          +N     G R+D+I    
Sbjct: 212 LSANSEISPPPSPAEALKVYGMTCDSPLNTYS----AGKPIPENVLERGGKRLDYIFFRQ 267

Query: 231 EATSL 235
            A + 
Sbjct: 268 PAVAR 272


>gi|154706938|ref|YP_001424522.1| endonuclease/exonuclease/phosphatase family protein [Coxiella
           burnetii Dugway 5J108-111]
 gi|165918872|ref|ZP_02218958.1| endonuclease/exonuclease/phosphatase family protein [Coxiella
           burnetii RSA 334]
 gi|154356224|gb|ABS77686.1| endonuclease/exonuclease/phosphatase family protein [Coxiella
           burnetii Dugway 5J108-111]
 gi|165917420|gb|EDR36024.1| endonuclease/exonuclease/phosphatase family protein [Coxiella
           burnetii RSA 334]
          Length = 255

 Score = 44.0 bits (102), Expect = 0.025,   Method: Composition-based stats.
 Identities = 38/270 (14%), Positives = 67/270 (24%), Gaps = 38/270 (14%)

Query: 5   TVATWNVN-SIRARIHNLA-----AWIKENNPDIICLQET-----KTEDKNFPFETLQSL 53
           TV ++N++    AR            ++  + DI+ LQE      K+  K F    L   
Sbjct: 12  TVLSYNIHKGFSARYRRFVLPDIREALRAIDADIVLLQEVQGKHRKSRLKKFAHADL--- 68

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
                             SK+       +            +        + + + +L  
Sbjct: 69  ----------PQTEFIAESKWPHYMYGKNAVYGSAHHGNALLSNFPFKMVENINV-SLSQ 117

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
                I     D + +     +         E           I      + P+I   D 
Sbjct: 118 RASRSILHAIIDYEPTVELHVICIHLGLFRAERDYQLITLSKRIEAHVPSHAPLIIAGDF 177

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
                   ++ + +                 Y        S    +  RI +        
Sbjct: 178 NDWRRGAFNYMEKELELKEVYKVLEGKHAKTY------PASRPTLEVDRIYY----RGL- 226

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             L S  I  +   W K SDH P+     I
Sbjct: 227 -KLLSGEIFNESY-WKKLSDHLPLHAKFAI 254


>gi|320654071|gb|EFX22139.1| hypothetical protein ECO7815_07649 [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
          Length = 253

 Score = 44.0 bits (102), Expect = 0.025,   Method: Composition-based stats.
 Identities = 34/267 (12%), Positives = 64/267 (23%), Gaps = 32/267 (11%)

Query: 5   TVATWNVN-SI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN--YH 56
            V T N++        R  +  L   ++  + DI+CLQE            +++     H
Sbjct: 11  KVLTINIHKGFTAFNRRFILPELRDAVRTVSADIVCLQEV-MGAHEVHPLHVENWPDTSH 69

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
            E      ++  A        E               +     +++    R         
Sbjct: 70  YEFLADTMWSDFAYGHNAVYPEGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVP 129

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
                  +   +    R     +Q   L E +    D   +    D  +     N     
Sbjct: 130 PMTGKAIHVMCVHLGLREAHRQAQLAMLAEWVNELPDGEPVLVAGDFNDWRQKANHPLKV 189

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
                      +                                +R+D I +     +  
Sbjct: 190 QAGLDEIFTRAHGRPARTFPVQFPL-------------------LRLDRIYV----KNAS 226

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263
            SA      R W   SDH P+   + +
Sbjct: 227 ASAPTALPLRTWRHLSDHAPLSAEIHL 253


>gi|66825681|ref|XP_646195.1| hypothetical protein DDB_G0269692 [Dictyostelium discoideum AX4]
 gi|60474259|gb|EAL72196.1| hypothetical protein DDB_G0269692 [Dictyostelium discoideum AX4]
          Length = 620

 Score = 44.0 bits (102), Expect = 0.025,   Method: Composition-based stats.
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 4/41 (9%)

Query: 2   SVVTVATWNV--NSI--RARIHNLAAWIKENNPDIICLQET 38
            ++T  T+NV  +S   + R   L   I+  NPD+ICLQE 
Sbjct: 230 KILTFLTFNVWFDSFLWKQRAERLFKTIESKNPDVICLQEV 270


>gi|251781115|ref|ZP_04824035.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum E1 str. 'BoNT E Beluga']
 gi|243085430|gb|EES51320.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum E1 str. 'BoNT E Beluga']
          Length = 262

 Score = 44.0 bits (102), Expect = 0.025,   Method: Composition-based stats.
 Identities = 41/266 (15%), Positives = 85/266 (31%), Gaps = 10/266 (3%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYHI 57
           + + T N +S +      +I  LA  I EN+ D I LQE  ++ + N     L+  N+ +
Sbjct: 1   MKLLTLNCHSWQEENQIDKIKYLAKTIAENDYDAIALQEVSQSINSNVIKSNLKYDNFAV 60

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
               +           +    I      + L +  +           + +  ++      
Sbjct: 61  LLKSELDKYNTNYNFFWDFSHIGYEKYEEGLAIFTKHNIVDEKSFFIS-KANDIEYWKTR 119

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
            I    ++     I  +        + EEP        ++ +           +      
Sbjct: 120 RIVKLTFEYNNENIDIYSCHLGWWEDQEEPFK-CQVKKLLEENTSNNTTFFMGDFNNNAF 178

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
              + +  L N G  D    + +  +  +            + +R+D I+ + +   +L 
Sbjct: 179 IRNEGYDYLLNKGLIDTFTISKEADNGITVRGKIDGWDENKEKLRLDLILSNKKL-DVLT 237

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263
           S  I          SDH  V VSL++
Sbjct: 238 SKVIFNGI-NKDIISDHYGVEVSLNL 262


>gi|238881455|gb|EEQ45093.1| conserved hypothetical protein [Candida albicans WO-1]
          Length = 359

 Score = 44.0 bits (102), Expect = 0.025,   Method: Composition-based stats.
 Identities = 36/268 (13%), Positives = 80/268 (29%), Gaps = 48/268 (17%)

Query: 32  IICLQETKTEDKNFP----FETLQSLNYHIETCGQKSYNGVA--ILSKYQPIEIVTHLPG 85
           IICLQE    ++          +Q  NY+         +G    IL K Q  +I+ +   
Sbjct: 108 IICLQEV-LHNQLIDILQGLNDIQEWNYYGVGRTDGEKSGEFAPILYKDQDFKIIENSTF 166

Query: 86  DDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELE 145
                     +       + + +          I    ++          R  S +L ++
Sbjct: 167 WLSPTPHVPSKGWDAALERIVTMVTFQSRLNPEIKFNIFNTHYDHRGVEARRKSSQLIVD 226

Query: 146 EPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY 205
           +   +          +  +    +  +         +    ++       ++ +     +
Sbjct: 227 KMKNY--------NDYPSFLCGDFNTEPNDEPYHILTKAGFKDGKILIDKKSAYGFETTF 278

Query: 206 SFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSA------------------------- 239
           + +D        N+ I RID+I  SP  T +L ++                         
Sbjct: 279 TGFD------INNEPISRIDYIW-SPSFTRILSNSNNDTNQDSDDDNDNDESYEVTLKQF 331

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPR 267
            I +        SDH PV+ + ++ + +
Sbjct: 332 GILSNWFNGHHFSDHRPVVSTYELRKKK 359


>gi|323976824|gb|EGB71912.1| endonuclease/Exonuclease/phosphatase [Escherichia coli TW10509]
          Length = 253

 Score = 44.0 bits (102), Expect = 0.025,   Method: Composition-based stats.
 Identities = 36/267 (13%), Positives = 64/267 (23%), Gaps = 32/267 (11%)

Query: 5   TVATWNVN-SI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN--YH 56
            V T N++        R  +  L   ++  + DI+CLQE            +++     H
Sbjct: 11  KVLTINIHKGFTAFNRRFILPELRDAVRTVSADIVCLQEV-MGAHEVHPLHVENWPDTSH 69

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
            E      ++  A        E               +     +I+    R         
Sbjct: 70  YEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIEHYENRDVSIDGAEKRGVLYCRIVP 129

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
                  +   +    R     +Q   L E +    D   I    D  +     N     
Sbjct: 130 PMTGKAIHVMCVHLGLREAHRQAQLAMLAEWVNELPDGEPILVAGDFNDWRQKANHPLKV 189

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
                      +                                +R+D I +     +  
Sbjct: 190 QAGLDEIFTRAHGRPARTFPVQFPL-------------------LRLDRIYV----KNAS 226

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263
            SA      R W   SDH P+   + +
Sbjct: 227 ASAPTALPLRTWRHLSDHAPLSAEIHL 253


>gi|182683680|ref|YP_001835427.1| hypothetical protein SPCG_0710 [Streptococcus pneumoniae CGSP14]
 gi|182629014|gb|ACB89962.1| hypothetical protein SPCG_0710 [Streptococcus pneumoniae CGSP14]
          Length = 249

 Score = 44.0 bits (102), Expect = 0.025,   Method: Composition-based stats.
 Identities = 28/250 (11%), Positives = 67/250 (26%), Gaps = 9/250 (3%)

Query: 21  LAAWIKENNPDIICLQETK-------TEDKNFPFETLQSLNYHIETCGQKSYNGVAILSK 73
           +   I E + D+IC QE          E  +       +   H +   +     +    K
Sbjct: 1   MLEDILEKDYDLICFQEINQEMTSSEVEVNDLYQALPAAEPIHQDHYVRLLVEKLLEQGK 60

Query: 74  YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKR 133
                   +  G D   +   I +   I  + + + ++  P           + +   K 
Sbjct: 61  NYYWTWAYNHIGYDRYHEGVAILSKTPIEAREILVSDVDDPTDYHTRRVALAETVVDGKE 120

Query: 134 FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTD 193
               +      ++                    ++  +      +          +G  D
Sbjct: 121 LAVASVHLSWWDKGFQEEWARFEAVLKKLNKPLLLAGDFNNPAGQEGYQAILASPLGLQD 180

Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253
           A     +    Y+            + +RID++  + E    + +  +        + SD
Sbjct: 181 AFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTTKELA--VENLHVVFDGNKSPQVSD 238

Query: 254 HTPVIVSLDI 263
           H  +   L+ 
Sbjct: 239 HYGLNAILNW 248


>gi|15800541|ref|NP_286553.1| hypothetical protein Z1009 [Escherichia coli O157:H7 EDL933]
 gi|15830122|ref|NP_308895.1| hypothetical protein ECs0868 [Escherichia coli O157:H7 str. Sakai]
 gi|16128758|ref|NP_415311.1| conserved protein, endo/exonuclease/phosphatase family PFAM PF03372
           [Escherichia coli str. K-12 substr. MG1655]
 gi|24112158|ref|NP_706668.1| hypothetical protein SF0740 [Shigella flexneri 2a str. 301]
 gi|26246763|ref|NP_752803.1| hypothetical protein c0873 [Escherichia coli CFT073]
 gi|30062275|ref|NP_836446.1| hypothetical protein S0781 [Shigella flexneri 2a str. 2457T]
 gi|74311333|ref|YP_309752.1| hypothetical protein SSON_0769 [Shigella sonnei Ss046]
 gi|89107641|ref|AP_001421.1| predicted DNase [Escherichia coli str. K-12 substr. W3110]
 gi|91209822|ref|YP_539808.1| putative DNase [Escherichia coli UTI89]
 gi|110804791|ref|YP_688311.1| hypothetical protein SFV_0773 [Shigella flexneri 5 str. 8401]
 gi|168764306|ref|ZP_02789313.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli O157:H7 str. EC4501]
 gi|168787004|ref|ZP_02812011.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli O157:H7 str. EC869]
 gi|168799936|ref|ZP_02824943.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli O157:H7 str. EC508]
 gi|170080449|ref|YP_001729769.1| DNase [Escherichia coli str. K-12 substr. DH10B]
 gi|170684095|ref|YP_001742893.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli SMS-3-5]
 gi|191169284|ref|ZP_03031034.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli B7A]
 gi|193064436|ref|ZP_03045517.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli E22]
 gi|193069403|ref|ZP_03050358.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli E110019]
 gi|194428175|ref|ZP_03060718.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli B171]
 gi|194433120|ref|ZP_03065402.1| endonuclease/exonuclease/phosphatase family protein [Shigella
           dysenteriae 1012]
 gi|209918036|ref|YP_002292120.1| endonuclease/exonuclease/phosphatase [Escherichia coli SE11]
 gi|215485878|ref|YP_002328309.1| predicted DNase [Escherichia coli O127:H6 str. E2348/69]
 gi|217324324|ref|ZP_03440408.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli O157:H7 str. TW14588]
 gi|218553374|ref|YP_002386287.1| putative metal-dependent hydrolase [Escherichia coli IAI1]
 gi|218557695|ref|YP_002390608.1| metal-dependent hydrolase [Escherichia coli S88]
 gi|218688576|ref|YP_002396788.1| putative metal-dependent hydrolase [Escherichia coli ED1a]
 gi|218694264|ref|YP_002401931.1| putative metal-dependent hydrolase [Escherichia coli 55989]
 gi|218704168|ref|YP_002411687.1| putative metal-dependent hydrolase [Escherichia coli UMN026]
 gi|227884248|ref|ZP_04002053.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli 83972]
 gi|237707251|ref|ZP_04537732.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|238900049|ref|YP_002925845.1| putative DNase [Escherichia coli BW2952]
 gi|256021140|ref|ZP_05435005.1| putative DNase [Shigella sp. D9]
 gi|256023614|ref|ZP_05437479.1| putative DNase [Escherichia sp. 4_1_40B]
 gi|260843033|ref|YP_003220811.1| putative DNase [Escherichia coli O103:H2 str. 12009]
 gi|260866957|ref|YP_003233359.1| putative DNase [Escherichia coli O111:H- str. 11128]
 gi|261225437|ref|ZP_05939718.1| putative DNase [Escherichia coli O157:H7 str. FRIK2000]
 gi|261258594|ref|ZP_05951127.1| putative DNase [Escherichia coli O157:H7 str. FRIK966]
 gi|291281787|ref|YP_003498605.1| hypothetical protein G2583_1018 [Escherichia coli O55:H7 str.
           CB9615]
 gi|293404090|ref|ZP_06648084.1| ybhP protein [Escherichia coli FVEC1412]
 gi|293409167|ref|ZP_06652743.1| ybhP protein [Escherichia coli B354]
 gi|293414069|ref|ZP_06656718.1| ybhP protein [Escherichia coli B185]
 gi|293433051|ref|ZP_06661479.1| ybhP protein [Escherichia coli B088]
 gi|298379871|ref|ZP_06989476.1| ybhP protein [Escherichia coli FVEC1302]
 gi|300816436|ref|ZP_07096658.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 107-1]
 gi|300898278|ref|ZP_07116629.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 198-1]
 gi|300907118|ref|ZP_07124784.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 84-1]
 gi|300920037|ref|ZP_07136496.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 115-1]
 gi|300993265|ref|ZP_07180312.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 45-1]
 gi|301020719|ref|ZP_07184787.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 69-1]
 gi|301024514|ref|ZP_07188190.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 196-1]
 gi|301051290|ref|ZP_07198116.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 185-1]
 gi|301306923|ref|ZP_07212967.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 124-1]
 gi|307137414|ref|ZP_07496770.1| hypothetical protein EcolH7_04690 [Escherichia coli H736]
 gi|307313800|ref|ZP_07593417.1| Endonuclease/exonuclease/phosphatase [Escherichia coli W]
 gi|309797967|ref|ZP_07692346.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 145-7]
 gi|312969189|ref|ZP_07783396.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia
           coli 2362-75]
 gi|331641303|ref|ZP_08342438.1| putative cytoplasmic protein [Escherichia coli H736]
 gi|331646007|ref|ZP_08347110.1| putative cytoplasmic protein [Escherichia coli M605]
 gi|331651793|ref|ZP_08352812.1| putative cytoplasmic protein [Escherichia coli M718]
 gi|331656807|ref|ZP_08357769.1| putative cytoplasmic protein [Escherichia coli TA206]
 gi|331672300|ref|ZP_08373091.1| putative cytoplasmic protein [Escherichia coli TA280]
 gi|77416769|sp|P0AAW3|YBHP_ECO57 RecName: Full=Uncharacterized protein ybhP
 gi|77416770|sp|P0AAW2|YBHP_ECOL6 RecName: Full=Uncharacterized protein ybhP
 gi|77416771|sp|P0AAW1|YBHP_ECOLI RecName: Full=Uncharacterized protein ybhP
 gi|77416772|sp|P0AAW4|YBHP_SHIFL RecName: Full=Uncharacterized protein ybhP
 gi|12513779|gb|AAG55161.1|AE005259_12 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
 gi|26107162|gb|AAN79346.1|AE016757_250 Hypothetical protein ybhP [Escherichia coli CFT073]
 gi|1787008|gb|AAC73877.1| conserved protein, endo/exonuclease/phosphatase family PFAM PF03372
           [Escherichia coli str. K-12 substr. MG1655]
 gi|4062347|dbj|BAA35449.1| predicted DNase [Escherichia coli str. K12 substr. W3110]
 gi|13360327|dbj|BAB34291.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
 gi|24050995|gb|AAN42375.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
 gi|30040520|gb|AAP16252.1| hypothetical protein S0781 [Shigella flexneri 2a str. 2457T]
 gi|73854810|gb|AAZ87517.1| conserved hypothetical protein [Shigella sonnei Ss046]
 gi|91071396|gb|ABE06277.1| putative DNase [Escherichia coli UTI89]
 gi|110614339|gb|ABF03006.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
 gi|169888284|gb|ACB01991.1| predicted DNase [Escherichia coli str. K-12 substr. DH10B]
 gi|170521813|gb|ACB19991.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli SMS-3-5]
 gi|189365678|gb|EDU84094.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli O157:H7 str. EC4501]
 gi|189373043|gb|EDU91459.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli O157:H7 str. EC869]
 gi|189377721|gb|EDU96137.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli O157:H7 str. EC508]
 gi|190900673|gb|EDV60472.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli B7A]
 gi|192928898|gb|EDV82511.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli E22]
 gi|192957356|gb|EDV87804.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli E110019]
 gi|194413735|gb|EDX30014.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli B171]
 gi|194418617|gb|EDX34704.1| endonuclease/exonuclease/phosphatase family protein [Shigella
           dysenteriae 1012]
 gi|209775978|gb|ACI86301.1| hypothetical protein ECs0868 [Escherichia coli]
 gi|209775980|gb|ACI86302.1| hypothetical protein ECs0868 [Escherichia coli]
 gi|209775982|gb|ACI86303.1| hypothetical protein ECs0868 [Escherichia coli]
 gi|209775984|gb|ACI86304.1| hypothetical protein ECs0868 [Escherichia coli]
 gi|209911295|dbj|BAG76369.1| endonuclease/exonuclease/phosphatase [Escherichia coli SE11]
 gi|215263950|emb|CAS08290.1| predicted DNase [Escherichia coli O127:H6 str. E2348/69]
 gi|217320545|gb|EEC28969.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli O157:H7 str. TW14588]
 gi|218350996|emb|CAU96700.1| putative metal-dependent hydrolase [Escherichia coli 55989]
 gi|218360142|emb|CAQ97691.1| putative metal-dependent hydrolase [Escherichia coli IAI1]
 gi|218364464|emb|CAR02146.1| putative metal-dependent hydrolase [Escherichia coli S88]
 gi|218426140|emb|CAR06960.1| putative metal-dependent hydrolase [Escherichia coli ED1a]
 gi|218431265|emb|CAR12143.1| putative metal-dependent hydrolase [Escherichia coli UMN026]
 gi|222032521|emb|CAP75260.1| Uncharacterized protein ybhP [Escherichia coli LF82]
 gi|226898461|gb|EEH84720.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|227839000|gb|EEJ49466.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli 83972]
 gi|238862335|gb|ACR64333.1| predicted DNase [Escherichia coli BW2952]
 gi|257758180|dbj|BAI29677.1| predicted DNase [Escherichia coli O103:H2 str. 12009]
 gi|257763313|dbj|BAI34808.1| predicted DNase [Escherichia coli O111:H- str. 11128]
 gi|260450063|gb|ACX40485.1| Endonuclease/exonuclease/phosphatase [Escherichia coli DH1]
 gi|281600115|gb|ADA73099.1| Metal-dependent hydrolase [Shigella flexneri 2002017]
 gi|284920642|emb|CBG33705.1| putative endonuclease/exonuclease/phosphatase [Escherichia coli
           042]
 gi|290761660|gb|ADD55621.1| hypothetical protein G2583_1018 [Escherichia coli O55:H7 str.
           CB9615]
 gi|291323870|gb|EFE63292.1| ybhP protein [Escherichia coli B088]
 gi|291428676|gb|EFF01701.1| ybhP protein [Escherichia coli FVEC1412]
 gi|291434127|gb|EFF07100.1| ybhP protein [Escherichia coli B185]
 gi|291469635|gb|EFF12119.1| ybhP protein [Escherichia coli B354]
 gi|294491262|gb|ADE90018.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli IHE3034]
 gi|298279569|gb|EFI21077.1| ybhP protein [Escherichia coli FVEC1302]
 gi|299880367|gb|EFI88578.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 196-1]
 gi|300297049|gb|EFJ53434.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 185-1]
 gi|300358067|gb|EFJ73937.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 198-1]
 gi|300398530|gb|EFJ82068.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 69-1]
 gi|300401163|gb|EFJ84701.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 84-1]
 gi|300406673|gb|EFJ90211.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 45-1]
 gi|300412984|gb|EFJ96294.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 115-1]
 gi|300531126|gb|EFK52188.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 107-1]
 gi|300837849|gb|EFK65609.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 124-1]
 gi|306906440|gb|EFN36954.1| Endonuclease/exonuclease/phosphatase [Escherichia coli W]
 gi|307552635|gb|ADN45410.1| endonuclease/exonuclease/phosphatase family [Escherichia coli ABU
           83972]
 gi|307627800|gb|ADN72104.1| hypothetical protein UM146_13695 [Escherichia coli UM146]
 gi|308118455|gb|EFO55717.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 145-7]
 gi|309701068|emb|CBJ00366.1| putative endonuclease/exonuclease/phosphatase [Escherichia coli
           ETEC H10407]
 gi|312286591|gb|EFR14504.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia
           coli 2362-75]
 gi|312945308|gb|ADR26135.1| putative DNase [Escherichia coli O83:H1 str. NRG 857C]
 gi|313650312|gb|EFS14724.1| endonuclease/Exonuclease/phosphatase family protein [Shigella
           flexneri 2a str. 2457T]
 gi|315060026|gb|ADT74353.1| predicted DNase [Escherichia coli W]
 gi|315135440|dbj|BAJ42599.1| hypothetical protein ECDH1ME8569_0743 [Escherichia coli DH1]
 gi|315257776|gb|EFU37744.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 85-1]
 gi|315287185|gb|EFU46597.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 110-3]
 gi|315292598|gb|EFU51950.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 153-1]
 gi|315619791|gb|EFV00310.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia
           coli 3431]
 gi|320178501|gb|EFW53466.1| Endonuclease/Exonuclease/phosphatase family protein [Shigella
           boydii ATCC 9905]
 gi|320192735|gb|EFW67376.1| Endonuclease/Exonuclease/phosphatase family protein [Escherichia
           coli O157:H7 str. EC1212]
 gi|320196715|gb|EFW71338.1| Endonuclease/Exonuclease/phosphatase family protein [Escherichia
           coli WV_060327]
 gi|320637652|gb|EFX07444.1| hypothetical protein ECO5101_22645 [Escherichia coli O157:H7 str.
           G5101]
 gi|320642778|gb|EFX11979.1| hypothetical protein ECO9389_02401 [Escherichia coli O157:H- str.
           493-89]
 gi|320648234|gb|EFX16889.1| hypothetical protein ECO2687_18506 [Escherichia coli O157:H- str. H
           2687]
 gi|320659694|gb|EFX27250.1| hypothetical protein ECO5905_24328 [Escherichia coli O55:H7 str.
           USDA 5905]
 gi|320664164|gb|EFX31315.1| hypothetical protein ECOSU61_00998 [Escherichia coli O157:H7 str.
           LSU-61]
 gi|323159720|gb|EFZ45698.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia
           coli E128010]
 gi|323165708|gb|EFZ51494.1| endonuclease/Exonuclease/phosphatase family protein [Shigella
           sonnei 53G]
 gi|323172094|gb|EFZ57733.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia
           coli LT-68]
 gi|323175592|gb|EFZ61187.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia
           coli 1180]
 gi|323185054|gb|EFZ70420.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia
           coli 1357]
 gi|323190916|gb|EFZ76183.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia
           coli RN587/1]
 gi|323379415|gb|ADX51683.1| Endonuclease/exonuclease/phosphatase [Escherichia coli KO11]
 gi|323938145|gb|EGB34405.1| endonuclease/Exonuclease/phosphatase [Escherichia coli E1520]
 gi|323942663|gb|EGB38828.1| endonuclease/Exonuclease/phosphatase [Escherichia coli E482]
 gi|323947052|gb|EGB43065.1| endonuclease/Exonuclease/phosphatase [Escherichia coli H120]
 gi|323953547|gb|EGB49413.1| endonuclease/Exonuclease/phosphatase [Escherichia coli H252]
 gi|323958079|gb|EGB53788.1| endonuclease/Exonuclease/phosphatase [Escherichia coli H263]
 gi|323971955|gb|EGB67176.1| endonuclease/Exonuclease/phosphatase [Escherichia coli TA007]
 gi|324009624|gb|EGB78843.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 57-2]
 gi|324018520|gb|EGB87739.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 117-3]
 gi|324116214|gb|EGC10136.1| endonuclease/Exonuclease/phosphatase [Escherichia coli E1167]
 gi|326338324|gb|EGD62153.1| Endonuclease/Exonuclease/phosphatase family protein [Escherichia
           coli O157:H7 str. 1125]
 gi|326346302|gb|EGD70040.1| Endonuclease/Exonuclease/phosphatase family protein [Escherichia
           coli O157:H7 str. 1044]
 gi|330910533|gb|EGH39043.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia
           coli AA86]
 gi|331038101|gb|EGI10321.1| putative cytoplasmic protein [Escherichia coli H736]
 gi|331044759|gb|EGI16886.1| putative cytoplasmic protein [Escherichia coli M605]
 gi|331050071|gb|EGI22129.1| putative cytoplasmic protein [Escherichia coli M718]
 gi|331055055|gb|EGI27064.1| putative cytoplasmic protein [Escherichia coli TA206]
 gi|331070495|gb|EGI41859.1| putative cytoplasmic protein [Escherichia coli TA280]
 gi|332091084|gb|EGI96174.1| endonuclease/Exonuclease/phosphatase family protein [Shigella
           dysenteriae 155-74]
 gi|332104718|gb|EGJ08064.1| conserved hypothetical protein [Shigella sp. D9]
          Length = 253

 Score = 44.0 bits (102), Expect = 0.025,   Method: Composition-based stats.
 Identities = 34/267 (12%), Positives = 64/267 (23%), Gaps = 32/267 (11%)

Query: 5   TVATWNVN-SI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN--YH 56
            V T N++        R  +  L   ++  + DI+CLQE            +++     H
Sbjct: 11  KVLTINIHKGFTAFNRRFILPELRDAVRTVSADIVCLQEV-MGAHEVHPLHVENWPDTSH 69

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
            E      ++  A        E               +     +++    R         
Sbjct: 70  YEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVP 129

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
                  +   +    R     +Q   L E +    D   +    D  +     N     
Sbjct: 130 PMTGKAIHVMCVHLGLREAHRQAQLAMLAEWVNELPDGEPVLVAGDFNDWRQKANHPLKV 189

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
                      +                                +R+D I +     +  
Sbjct: 190 QAGLDEIFTRAHGRPARTFPVQFPL-------------------LRLDRIYV----KNAS 226

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263
            SA      R W   SDH P+   + +
Sbjct: 227 ASAPTALPLRTWRHLSDHAPLSAEIHL 253


>gi|239942130|ref|ZP_04694067.1| endonuclease/exonuclease/phosphatase family protein [Streptomyces
           roseosporus NRRL 15998]
 gi|239988594|ref|ZP_04709258.1| endonuclease/exonuclease/phosphatase family protein [Streptomyces
           roseosporus NRRL 11379]
 gi|291445578|ref|ZP_06584968.1| endonuclease/exonuclease/phosphatase family protein [Streptomyces
           roseosporus NRRL 15998]
 gi|291348525|gb|EFE75429.1| endonuclease/exonuclease/phosphatase family protein [Streptomyces
           roseosporus NRRL 15998]
          Length = 332

 Score = 44.0 bits (102), Expect = 0.026,   Method: Composition-based stats.
 Identities = 39/295 (13%), Positives = 79/295 (26%), Gaps = 49/295 (16%)

Query: 2   SVVTVATWNV--------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           S + V T N+        + +      L A IK++ PD++ LQET     +   E  + L
Sbjct: 49  SELRVMTLNLWHGGDRVDDGL---AKQL-AVIKKHRPDVVGLQET---SGHSAREIAEEL 101

Query: 54  NYHIE--------TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT 105
            +                  + V        + I                          
Sbjct: 102 GWDHWQSDADLGIISRFPFTSEVETSQAAAGVRIRIDEATGQEVELWTAHLGYDPYGPYD 161

Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII-PQPHDCY 164
                + +       +       +               E P++  GD+N          
Sbjct: 162 ACFDRMPVEEIFRREAESGRTPQAEAIAKDLAPKIAAADETPVLLVGDFNTPSHLDWTEA 221

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH---HLYSFWDYYADSWSKNKGI 221
                     +        +  +  G  D+ R  +         ++    +  + K++G 
Sbjct: 222 TKDSHCG---YGQVDWPVTKIFEKAGLKDSFREANPDPAAVPGNTW----SPVYPKHEGS 274

Query: 222 --------RIDHI-MLSPEATSLLHSARIDTKPR------GWTKPSDHTPVIVSL 261
                   RID I  +  + T     + ++  P+      G   P+DH  V+ + 
Sbjct: 275 TGVDEPQDRIDFIDYVGDKLTVKDSVSFVEGDPKPVPDQAGNAWPTDHAAVLTTF 329


>gi|114608811|ref|XP_001151814.1| PREDICTED: sphingomyelin phosphodiesterase 2, neutral membrane
           (neutral sphingomyelinase) isoform 1 [Pan troglodytes]
          Length = 394

 Score = 44.0 bits (102), Expect = 0.026,   Method: Composition-based stats.
 Identities = 37/276 (13%), Positives = 82/276 (29%), Gaps = 30/276 (10%)

Query: 18  IHNLAAWIKENNPDIICLQETKT-EDKNFPFETLQS-LNYHIETCGQKSYNGVAILSKYQ 75
           +  L  ++ + + D+  L+E  + +D  +  + L                +G+ + SK+ 
Sbjct: 1   MRRLGDFLNQESFDLALLEEVWSEQDFQYLRQKLSPTYPAAHHFRSGIIGSGLCVFSKHP 60

Query: 76  PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN-----------LYLPHGNPITSTKY 124
             E+  H+   +           F+     L + +                 N       
Sbjct: 61  IQELTQHIYTLNGYPYMIHHGDWFSGKAVGLLVLHLSGMVLNAYVTHLHAEYNRRKDIYL 120

Query: 125 DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ 184
             +++      +F     +  + ++  GD N+ P+   C     W       LE R    
Sbjct: 121 AHRVAQAWELAQFIHHTSKKADVVLLCGDLNMHPEDLGCCLLKEWTGLHDAYLETRDFKG 180

Query: 185 KLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT- 243
             +                                G+RID+++     +    S +    
Sbjct: 181 SEEGNTMVPKNCYVSQQEL-----------KPFPFGVRIDYVLY-KAVSGFYISCKSLET 228

Query: 244 ----KPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTS 275
                P   T  SDH  ++ +L +     +Q  S++
Sbjct: 229 TTGFDPHSGTPLSDHEALMATLFVRHSPPQQNPSST 264


>gi|147797881|emb|CAN63072.1| hypothetical protein VITISV_025643 [Vitis vinifera]
          Length = 740

 Score = 44.0 bits (102), Expect = 0.026,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 23/61 (37%), Gaps = 9/61 (14%)

Query: 201 THHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
               +++     +    N+   R+D  ++SP            ++ R     SDH P+++
Sbjct: 646 QGGEFTW-----NGGLNNQVWARLDRFLVSPSWLDQFSGV---SQSRLSRPISDHFPIVL 697

Query: 260 S 260
            
Sbjct: 698 E 698


>gi|162455565|ref|YP_001617933.1| hypothetical protein sce7284 [Sorangium cellulosum 'So ce 56']
 gi|161166147|emb|CAN97452.1| hypothetical protein sce7284 [Sorangium cellulosum 'So ce 56']
          Length = 354

 Score = 44.0 bits (102), Expect = 0.026,   Method: Composition-based stats.
 Identities = 35/307 (11%), Positives = 78/307 (25%), Gaps = 47/307 (15%)

Query: 4   VTVATWNV----NSIR------ARIHNLAAWIKENNP--DIICLQETKTE---------- 41
           + + ++NV    +  R      A I  +A  +   +P  D++CLQE +T+          
Sbjct: 45  LRIVSYNVRYFGHGTRGIASTSAAITRIATTLARMSPLPDLVCLQEVETQSLRSSTMNPR 104

Query: 42  ----DKNFPFETLQ-------------SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLP 84
               +        +              + Y+      +  +   I +    +       
Sbjct: 105 WHPEETQLDRLMTELHAALAQAQRRERYVAYYFPAHTYRLTSRTNIYTTGLAVLARDTFH 164

Query: 85  GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL 144
               + +               +            +   +D   + +     F+ +    
Sbjct: 165 IGHHNAERPHDITHRRGVKSLKQTRICAHVSFEHESGQSFDVFNTHLSLPSVFSREFWTG 224

Query: 145 EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL 204
           E  + F  +     +    +      +D    +    S        F        D    
Sbjct: 225 EARMGFGPNQIEEARVLADFVRRERRSDNFVVVGDFNSLPGSPVDRFLREEIGFVDAFAK 284

Query: 205 YSFWD-YYADSWSK----NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP--SDHTPV 257
              +    A ++      N  + +DH+  S      L                 SDH P+
Sbjct: 285 VRCFSETEARAFPTAGFMNLRMHLDHVYSSERL-QWLDFTGTHPFGHKGAFAGLSDHVPL 343

Query: 258 IVSLDIP 264
           I    +P
Sbjct: 344 IARCRLP 350


>gi|126733500|ref|ZP_01749247.1| hypothetical protein RCCS2_05074 [Roseobacter sp. CCS2]
 gi|126716366|gb|EBA13230.1| hypothetical protein RCCS2_05074 [Roseobacter sp. CCS2]
          Length = 306

 Score = 44.0 bits (102), Expect = 0.026,   Method: Composition-based stats.
 Identities = 41/288 (14%), Positives = 76/288 (26%), Gaps = 42/288 (14%)

Query: 2   SVVTVATWNVNSI---R---ARIHNLAAW----------IKENNPDIICLQETKTEDKNF 45
           + + VAT+NV+ I   R   A   ++  W              + D+I  QE        
Sbjct: 39  NTLRVATYNVHYIILGRETGAW--SVGDWERRKTPFNLAFNAVDADVIGFQE-------- 88

Query: 46  PFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI-NTQ 104
               ++S           + + +   +       V             +     T+ +  
Sbjct: 89  ----MESFGRGSGGRINLTLDWLLENNPDYAAAAVGDPAAFPSTQPILYRSDRLTLLDDG 144

Query: 105 TLRIGNLYLPHGNPITSTKYD-DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
                +      +   +  +         R          +     +A   N I      
Sbjct: 145 WFFFSDTPDVIYSRTFNGSFPAFTSWAQFRDNTSGEIFRVINLHTDYASRSNRIQSIELV 204

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI-- 221
            + I     A +  +    F      G               +F      ++  N+GI  
Sbjct: 205 ADRI-----APWMADNETLFVIGDFNGRIGDTVVNILADKGLNFAPVQGSTFHFNRGINL 259

Query: 222 --RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPR 267
              IDHI  S     L+    +  +      P+DH PVI    +   R
Sbjct: 260 FGAIDHI-ASTGNAQLIGQPIVLRRKFAGEWPTDHYPVIADYRLGPSR 306


>gi|125543950|gb|EAY90089.1| hypothetical protein OsI_11658 [Oryza sativa Indica Group]
          Length = 523

 Score = 44.0 bits (102), Expect = 0.026,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 75/251 (29%), Gaps = 16/251 (6%)

Query: 16  ARIHNLAAWIKENNPDIICLQETKTEDKN---FPFETLQSLNY-HIETCGQKSYNGVAIL 71
           AR  ++A  ++E   D++ LQ  + E+        E  + L   ++         G A+L
Sbjct: 245 ARRRSVAEALREAGADMVALQNVRAEEGRGMRPLSELAEGLGMRYVFAESWAPEYGNAVL 304

Query: 72  SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWI 131
           S++           D  D +              + +   +L H +     K  D I   
Sbjct: 305 SRWPIKRWNARRLADHFDFRNVMRATIEVPGAGEVNLYCTHLDHLDEGLRMKQVDSILRF 364

Query: 132 KRFLRFASQR--LELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNM 189
                         L+     A  +  I + H+       +++    L+ ++        
Sbjct: 365 ADGHHHILAGGLNALDASDYSADRWAAIAKYHEEIGKPPPKSEVMRHLKAKRYVDAKDFA 424

Query: 190 GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT 249
           G  DA              D          G R+D+I+ SP +                 
Sbjct: 425 GGRDAGLVVVPNGQ-----DVQGTCK---YGTRVDYILASPNSPYSFVPGS--YAVVPSM 474

Query: 250 KPSDHTPVIVS 260
             SDH  V+V 
Sbjct: 475 GTSDHHIVMVD 485


>gi|312958184|ref|ZP_07772707.1| endonuclease/exonuclease/phosphatase [Pseudomonas fluorescens WH6]
 gi|311287615|gb|EFQ66173.1| endonuclease/exonuclease/phosphatase [Pseudomonas fluorescens WH6]
          Length = 292

 Score = 44.0 bits (102), Expect = 0.026,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 14/59 (23%)

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
           +F  +            +DHI+LSP  T  L S ++   P      SDH PV V + +P
Sbjct: 228 TFPSWRPQ-------RCLDHILLSPTLT--LESVQVLAHP-----ISDHLPVAVEIRLP 272


>gi|149279437|ref|ZP_01885567.1| hypothetical protein PBAL39_16596 [Pedobacter sp. BAL39]
 gi|149229730|gb|EDM35119.1| hypothetical protein PBAL39_16596 [Pedobacter sp. BAL39]
          Length = 294

 Score = 44.0 bits (102), Expect = 0.026,   Method: Composition-based stats.
 Identities = 26/240 (10%), Positives = 64/240 (26%), Gaps = 15/240 (6%)

Query: 22  AAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80
           A  ++ +  D+  +QE  K +  +      +  +Y       K     + +   +    +
Sbjct: 64  ANLLRFHQYDVFGVQEAFKNQVDDLQRLLPEYDHYGAGRDDGKDGGEHSTVFYRKDKFKL 123

Query: 81  THLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQ 140
                  L          +       RI +             Y     +          
Sbjct: 124 IKKGDFWLSENPDRPGLGWDATCCN-RICSYVCLQDLKTGKQFYFFNAHFDHE----GKI 178

Query: 141 RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHD 200
                  LI +   +I  +    +   +    +        +   L++          ++
Sbjct: 179 ARVESSKLIISKIRSIAGKLPAIFTGDLNGGHSSEWYLTLANSGFLKDTYGQVKFPYANN 238

Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
                  ++ +  +    +   IDH+ ++ + T       + T        SDH PV+V 
Sbjct: 239 AS-----FNAFGKALEGKEI--IDHVFVTKDFT--AKRWGLLTDTYHGKFISDHFPVLVD 289


>gi|320166045|gb|EFW42944.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 1251

 Score = 44.0 bits (102), Expect = 0.027,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 21/46 (45%), Gaps = 13/46 (28%)

Query: 4   VTVATWNVNSI-----------RARIHNLAAWIKENNPDIICLQET 38
           + + T+NV  +           + R   + A+++  + D+I LQE 
Sbjct: 285 LKIVTFNV--LFDVYQPELIHTKERTPRMLAFLESLDADVIALQEV 328


>gi|212545554|ref|XP_002152931.1| hypothetical protein PMAA_007610 [Penicillium marneffei ATCC 18224]
 gi|210065900|gb|EEA19994.1| hypothetical protein PMAA_007610 [Penicillium marneffei ATCC 18224]
          Length = 317

 Score = 44.0 bits (102), Expect = 0.027,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 19/58 (32%), Gaps = 4/58 (6%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
           ID ++ S E    +    I     G    SDH  +    DI  P +   +       P
Sbjct: 198 IDLVLASTELAEEMVKYGIHYTNHG----SDHQAIETEFDISVPDRPITERLLWKNAP 251


>gi|196046040|ref|ZP_03113268.1| putative secreted protein [Bacillus cereus 03BB108]
 gi|196023095|gb|EDX61774.1| putative secreted protein [Bacillus cereus 03BB108]
          Length = 264

 Score = 44.0 bits (102), Expect = 0.027,   Method: Composition-based stats.
 Identities = 41/278 (14%), Positives = 78/278 (28%), Gaps = 35/278 (12%)

Query: 3   VVTVATWNV-N--SI-RARIHNLAAWIKENNPDIICLQETKT-----EDKNFPFETLQSL 53
           ++ +AT+N+ N  S+   R+  +   I+  +P I+ LQE ++       KN        +
Sbjct: 7   ILRIATFNIWNHESLWFERLEAICEEIRSISPHILALQEVRSSVNLNSKKNVAQYIAGRI 66

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
            Y      +   +    L+    I I      ++   +    E+ +     T        
Sbjct: 67  GYPFCIFKEYPDSPDEGLAFLSKIPI----IAEEAIWETDIEESNYCAIRITFTYKGCKF 122

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
              N   + K           +    +    +  L+     +        Y       D 
Sbjct: 123 GVTNVHLNWKSSRIRQEQMNTVNNWIENRASDYELLCGDFNDDPFSMVHQYLIRKHWIDV 182

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
               E+ ++      + +        D                     R D IM+   A 
Sbjct: 183 AQFKEIEENMIAQPTLDYRKNPNLKDDVKQE----------------KRYDWIMIQENAA 226

Query: 234 ---SLLHSARIDTK---PRGWTKPSDHTPVIVSLDIPE 265
                + +  I  +         PSDH  V V L   E
Sbjct: 227 FEFPTIENVSIFGESALTSTGMFPSDHYGVFVDLKFNE 264


>gi|126728921|ref|ZP_01744736.1| endonuclease/exonuclease/phosphatase family protein [Sagittula
           stellata E-37]
 gi|126710851|gb|EBA09902.1| endonuclease/exonuclease/phosphatase family protein [Sagittula
           stellata E-37]
          Length = 333

 Score = 44.0 bits (102), Expect = 0.027,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 12/53 (22%)

Query: 223 IDHIMLSPEATSLLHSARIDT---KPRGWTKP---------SDHTPVIVSLDI 263
           +D++M+SP+  +     RI      PR W  P         SDH PV + L+I
Sbjct: 281 LDYVMVSPDLMARQPDWRIWHPFDNPRCWRDPALREALLTASDHFPVTLDLEI 333


>gi|301610412|ref|XP_002934749.1| PREDICTED: protein angel homolog 2 [Xenopus (Silurana) tropicalis]
          Length = 526

 Score = 44.0 bits (102), Expect = 0.027,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 5/46 (10%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIET 59
           R+ N+   + + N DI+CLQE   ++ ++  +    L+SL YH E 
Sbjct: 189 RLPNILKELVDMNADILCLQEV--QEDHYTTQIKPSLESLGYHCEY 232


>gi|296103284|ref|YP_003613430.1| endonuclease/exonuclease/phosphatase [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295057743|gb|ADF62481.1| endonuclease/exonuclease/phosphatase [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 253

 Score = 44.0 bits (102), Expect = 0.027,   Method: Composition-based stats.
 Identities = 31/268 (11%), Positives = 62/268 (23%), Gaps = 32/268 (11%)

Query: 4   VTVATWNVN-SI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN--Y 55
           + V T N++        R  +  L   ++  + DI+CLQE             ++     
Sbjct: 10  LKVLTINIHKGFTAFNRRFILPELRDAVRTVSADIVCLQEV-MGAHEVHPMHFENWPDTP 68

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
           H E      ++  A        E               +     ++     R        
Sbjct: 69  HYEFLADTMWSDYAYGRNAVYPEGHHGNAVLSRYPIEHYENRDVSVGESEKRGLLYCRIA 128

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
              +    +   +    R     +Q   L E      +   +    D  +     N    
Sbjct: 129 PPDLDFPVHVGCVHLGLREAHRQAQLQMLAEWTNALPEGEPVVIAGDFNDWRQRANHPLK 188

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
                +      +                                +R+D I +     S 
Sbjct: 189 VEAGLEEIFTRAHGRPARTFPVRFPL-------------------LRLDRIYVKNAHASS 229

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             +         W   SDH P+   + +
Sbjct: 230 PTA----LALLNWRHLSDHAPLSAEIHL 253


>gi|118587710|ref|ZP_01545120.1| Endonuclease/exonuclease/phosphatase [Stappia aggregata IAM 12614]
 gi|118439332|gb|EAV45963.1| Endonuclease/exonuclease/phosphatase [Stappia aggregata IAM 12614]
          Length = 320

 Score = 43.6 bits (101), Expect = 0.027,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 20/65 (30%), Gaps = 7/65 (10%)

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           S W     +     G+ +DH  +       + +        G    SDH PV     + E
Sbjct: 263 SRWTPTWLAPVPGIGLELDHFFVKDGLA--VKNCE-----LGHFNGSDHWPVFAEFTLAE 315

Query: 266 PRKKQ 270
            +   
Sbjct: 316 GKPSD 320


>gi|291239603|ref|XP_002739715.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
          Length = 563

 Score = 43.6 bits (101), Expect = 0.027,   Method: Composition-based stats.
 Identities = 41/286 (14%), Positives = 78/286 (27%), Gaps = 40/286 (13%)

Query: 7   ATWNV---NSI---------RARIHNLAAWIKENNPDIICLQETKTEDK--------NFP 46
           A++N+   NS          R RI +L   + +++ DI+  QE + + +           
Sbjct: 278 ASYNIWNFNSFVEDNHKEYER-RILHLGEIVSQSDSDIVSFQEVRFDLEKSGELGPFQVQ 336

Query: 47  FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
             +L   NY        ++         + + I +  P    D       A+   +    
Sbjct: 337 HLSLALPNYQFIYQPAMTFMDNIFGRTEEGLAIFSKFPIKSHDFILLSRNASDPNDFHQR 396

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRF-----ASQRLELEEPLIFAGDYNIIPQPH 161
              +  +          ++  +S  +               +   P +  GD N  P   
Sbjct: 397 ICIHAEIEFPVFGMIHVFNTHLSLSEDARDRTVVEIWEFMQKFTGPALLMGDLNAEPHEK 456

Query: 162 DCY----NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK 217
                     I         +      K          RA     H  ++        S 
Sbjct: 457 SIKFLTGQAEINGVQTKGLYDAWTLQHKEPRSAKLGLYRANEKRDHGLTWSTIKPQLVS- 515

Query: 218 NKGIRIDHIMLSPEATSLLHSARI---DTKPRGWTKPSDHTPVIVS 260
               RID+I +       +    I   D   R     SDH  ++ +
Sbjct: 516 ----RIDYIFV--RLPKDIQLHNISLLDDGKRKHFAASDHLGLLAT 555


>gi|226372700|gb|ACO51975.1| LINE-1 reverse transcriptase homolog [Rana catesbeiana]
          Length = 173

 Score = 43.6 bits (101), Expect = 0.027,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 1  MSVVTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTE 41
          M+ V + ++NV  +   A+ H +   +K+    I  LQET   
Sbjct: 1  MARVKIVSYNVRGLNVAAKRHQVYRELKQATCSIAFLQETHLT 43


>gi|126657241|ref|ZP_01728407.1| hypothetical protein CY0110_24971 [Cyanothece sp. CCY0110]
 gi|126621512|gb|EAZ92223.1| hypothetical protein CY0110_24971 [Cyanothece sp. CCY0110]
          Length = 652

 Score = 43.6 bits (101), Expect = 0.027,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 33/85 (38%), Gaps = 11/85 (12%)

Query: 200 DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS----ARIDTKPRGWTKPSDHT 255
                Y++         +N   ++D+I++S    +   S      ++         SDH 
Sbjct: 349 PPSDRYTY-------EFRNNLQQLDYILVSDNLFTTGKSQFDIVHVNVNQPSNLALSDHD 401

Query: 256 PVIVSLDIPEPRKKQQDSTSQNMKP 280
           PV+    +P+     +  TS+++ P
Sbjct: 402 PVLAQFTLPKRVTTPEKPTSESIFP 426


>gi|262383373|ref|ZP_06076509.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|262294271|gb|EEY82203.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
          Length = 246

 Score = 43.6 bits (101), Expect = 0.028,   Method: Composition-based stats.
 Identities = 33/262 (12%), Positives = 68/262 (25%), Gaps = 49/262 (18%)

Query: 4   VTVATWNVN-SI----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           + + ++N+   I    +  +  +A  I +  PD + LQE                     
Sbjct: 26  LRIMSYNIRIGIGMDQQTNLKRIAEVINKVQPDYVGLQEV-----------------DSV 68

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
                  N  A L++   +  +     +           +         I         P
Sbjct: 69  CERSGWINQYAELARLTGMYPIFAPATERSKGLYGIAALSRKKPRSYQYIP--LPGKEEP 126

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
            T    +     +            L    +         +P         E D+     
Sbjct: 127 RTFLCLEYPNYTLCNTHFSLDPDSRLASIRLINETMTSENKPILITGDFNMEPDSKEFKA 186

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           ++Q+++ L +    +   + H                     +R+D+I        L H 
Sbjct: 187 MKQTWRLLSD-PTLETYPSDHPR-------------------LRLDYIF-----GDLKHE 221

Query: 239 ARIDTKPRGWTKPSDHTPVIVS 260
            RI        + SDH P+ + 
Sbjct: 222 FRIINDQVIDIQSSDHLPIYID 243


>gi|289207222|ref|YP_003459288.1| endonuclease/exonuclease/phosphatase [Thioalkalivibrio sp. K90mix]
 gi|288942853|gb|ADC70552.1| Endonuclease/exonuclease/phosphatase [Thioalkalivibrio sp. K90mix]
          Length = 290

 Score = 43.6 bits (101), Expect = 0.028,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 7/44 (15%)

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPR 267
           DHI+L+P+    +   R+          SDH PV + +++P  +
Sbjct: 245 DHILLTPDL--HVSDMRVYNVAL-----SDHLPVGIEIELPAAQ 281


>gi|325300418|ref|YP_004260335.1| Endonuclease/exonuclease/phosphatase [Bacteroides salanitronis DSM
           18170]
 gi|324319971|gb|ADY37862.1| Endonuclease/exonuclease/phosphatase [Bacteroides salanitronis DSM
           18170]
          Length = 283

 Score = 43.6 bits (101), Expect = 0.028,   Method: Composition-based stats.
 Identities = 37/267 (13%), Positives = 73/267 (27%), Gaps = 25/267 (9%)

Query: 7   ATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57
           AT+N+         N+ + R   +  +I+  + DI+ +QE             +   Y  
Sbjct: 28  ATFNIRYDNPADQSNNWQFRKDTVTRFIQAQDMDIVGMQEV--LHNQLEDLLQRLPGYKS 85

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFI--EATFTINTQTLRIGNLYLPH 115
              G+         +     E    +   +    +++         +    RI       
Sbjct: 86  IGVGRDDGKTKGEYAPILYKEDRFEVLDSNTFWLSQYPDSIGFIGWDGACTRIATWAKMK 145

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
                          +             E  L+       I           +  +   
Sbjct: 146 DRQSGKIF-----MAVNTHFDHVGVTARREGALLIIRKIKEIVGDRPAVLTGDF--NVND 198

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
             E  ++      +    A  A   T   Y+F +         +  +ID I ++P+    
Sbjct: 199 QSEAYRTITSNAFVLKDAAKIAGKQTGVDYTFHN--FGQIPSEQCEKIDFIFVTPQI--K 254

Query: 236 LHSARIDTK-PRGWTKPSDHTPVIVSL 261
           +  + I  +   G    SDH P IV L
Sbjct: 255 VLDSFIPKEAAPGSKFLSDHNPQIVHL 281


>gi|260888950|ref|ZP_05900213.1| hypothetical protein GCWU000323_00109 [Leptotrichia hofstadii
           F0254]
 gi|260861397|gb|EEX75897.1| putative endonuclease/exonuclease/phosphatase [Leptotrichia
           hofstadii F0254]
          Length = 244

 Score = 43.6 bits (101), Expect = 0.028,   Method: Composition-based stats.
 Identities = 28/251 (11%), Positives = 61/251 (24%), Gaps = 39/251 (15%)

Query: 15  RARIH--NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILS 72
           R+  H   +  +I +  PDI+ L E               L                +  
Sbjct: 29  RSVRHVYRIGKFINKYKPDIVGLVEV-------------DLG---SFRMYSKNQATLLGR 72

Query: 73  KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIK 132
             +   +  +   +D +     +               L             D  +  + 
Sbjct: 73  ITRNNNVYQYKYEEDSNYMKFPMVRKQGNA-------ILSKKPVLREEFHYLDIGMKKLI 125

Query: 133 RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192
             +      + L    +              +     +             ++   M   
Sbjct: 126 IEVETEDIVVFLVHLALGGKTRQKQIVQLYNFVKNCKKPVIVAGDFNVFWGEEEIEMFLQ 185

Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPS 252
            +     +     +F  +       N    +D I+ S E    + S  +       T+ S
Sbjct: 186 ASNLQNINIRKEPTFPSW-------NPKRELDFILCSKEI--KVKSYEVI-----QTQLS 231

Query: 253 DHTPVIVSLDI 263
           DH P++V  +I
Sbjct: 232 DHLPILVDFEI 242


>gi|223674122|pdb|3G6S|A Chain A, Crystal Structure Of The
           EndonucleaseEXONUCLEASEPHOSPHATASE (BVU_0621) FROM
           Bacteroides Vulgatus. Northeast Structural Genomics
           Consortium Target Bvr56d
          Length = 267

 Score = 43.6 bits (101), Expect = 0.028,   Method: Composition-based stats.
 Identities = 39/269 (14%), Positives = 82/269 (30%), Gaps = 27/269 (10%)

Query: 7   ATWNV------NSIRA---RIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYH 56
           AT+N+      +S+     R   +  +IK++  DI+  QE    + ++      +     
Sbjct: 7   ATFNIRYDNPQDSLNNWQYRKDRVCQFIKDHELDIVGXQEVLHNQFQDLRAGLPEYDGIG 66

Query: 57  IETCGQKSYNGVA-ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
           +     K+    A +  +    E++        +         +      +     +   
Sbjct: 67  VGRDDGKTAGEYAPLFYRKDKYEVLDSNTFWLAENPDSVGXXGWDAVCVRIATWAKFKDK 126

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
                    +     +    R  S  L + +     G+                  DA  
Sbjct: 127 ATGKIFXAVNTHFDHVGEEARRQSALLIIRKIKEIVGER------PAVVTGDFNVTDASD 180

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDY-YADSWSKNKGIRIDHIMLSPEATS 234
             E   + + +    +  A R    T   Y+F D+    +    K   ID I ++P+   
Sbjct: 181 AYETITTNEFVXKDAYKTAARV---TGVDYTFHDFARIPAEDCEK---IDFIFVTPQVL- 233

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            + S  I  +       SDH P +  L++
Sbjct: 234 -VKSCEIPAEVPEAL-LSDHNPQLADLEL 260


>gi|254255473|ref|ZP_04948789.1| Metal-dependent hydrolase [Burkholderia dolosa AUO158]
 gi|124901210|gb|EAY71960.1| Metal-dependent hydrolase [Burkholderia dolosa AUO158]
          Length = 401

 Score = 43.6 bits (101), Expect = 0.028,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 7/41 (17%)

Query: 4   VTVATWNVNS------IRARIHNLAAWIKENNPDIICLQET 38
           + +AT+N+        + A    +AA I+E + D+I LQE 
Sbjct: 167 LRIATYNIGGGYGTWSVPAA-DRIAAVIEELDADVIALQEV 206


>gi|311696215|gb|ADP99088.1| endonuclease/exonuclease/phosphatase [marine bacterium HP15]
          Length = 286

 Score = 43.6 bits (101), Expect = 0.029,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 11/49 (22%)

Query: 221 IR----IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
            R    +DHI++SP     +  + + + P      SDH P+ + + +PE
Sbjct: 239 WRPEKALDHILVSPSLE--IRRSEVVSYPM-----SDHLPIAMDVALPE 280


>gi|313610961|gb|EFR85889.1| endonuclease/exonuclease/phosphatase family protein [Listeria
           monocytogenes FSL F2-208]
          Length = 273

 Score = 43.6 bits (101), Expect = 0.029,   Method: Composition-based stats.
 Identities = 36/272 (13%), Positives = 70/272 (25%), Gaps = 26/272 (9%)

Query: 2   SVVTVATWNVN---------SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52
            + +V T+N+          S   R     + + +   D + ++E     +    + +  
Sbjct: 17  KMFSVTTFNIRFDDTSERKKSWELRKTLTKSLLDKYQWDFMGVEE-PLLPQMLDMKAMLD 75

Query: 53  LNYH-IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
            +Y  +             +        +       L           T     + +   
Sbjct: 76  WDYFGVGRDDGLEKGEFTAVFYNSTRFTLLQEGHFWLSDTPDVPSIHSTAMFPRICVWGE 135

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
           +                   +    FASQ L  +   I      II    +        N
Sbjct: 136 FADSDGKQFYIFNTHLDHISEEARLFASQLLLKKAATIAKDSPVIILGDFNTQPNTPTYN 195

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
                 +  Q   +    G T +    H                 +N+  +ID+I +S E
Sbjct: 196 YITEKYQDAQLISQKPAKGPTGSFHDFHPL-------------RPENELEKIDYIFVSNE 242

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
               + +             SDH PV  +LD 
Sbjct: 243 F--QVSTYETIVDEVEGFSASDHFPVTANLDW 272


>gi|294643629|ref|ZP_06721431.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           ovatus SD CC 2a]
 gi|294808048|ref|ZP_06766821.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           xylanisolvens SD CC 1b]
 gi|292641006|gb|EFF59222.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           ovatus SD CC 2a]
 gi|294444689|gb|EFG13383.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           xylanisolvens SD CC 1b]
          Length = 297

 Score = 43.6 bits (101), Expect = 0.029,   Method: Composition-based stats.
 Identities = 31/265 (11%), Positives = 69/265 (26%), Gaps = 25/265 (9%)

Query: 4   VTVATWNVN-----SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           + VAT+N+          R   +A  I++ + +I   +E     +   +   Q  + +  
Sbjct: 53  MRVATYNLQVETGTGWTNRRERVAQLIRDYDFEICGFEE--ASWEQRSYLGTQLASDYQI 110

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
               +        +      +        LD    +   T  I +      N        
Sbjct: 111 LAYGRDTGNDDNKAGEMSGILYKKSRYTLLDAGRFWFSETPEIPSNGWDETNFKRFCVWG 170

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
                   K  ++       +         +     +   + +         N      E
Sbjct: 171 KFKDSKTQKEFYLFETHMPLADNARKHACQMLVDAVSDKAKDNTPAFCTGDFNATPDAPE 230

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           +         +       A      L++F              RID I +          
Sbjct: 231 IAT-TICQSGILKDAYREAAVQHGALFTFPSKKT---------RIDFIFV--------KH 272

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263
           A + +     +  SDH P+++ ++I
Sbjct: 273 ATVLSTRTIVSSLSDHYPMVIVVEI 297


>gi|241841265|ref|XP_002415328.1| conserved hypothetical protein [Ixodes scapularis]
 gi|215509540|gb|EEC18993.1| conserved hypothetical protein [Ixodes scapularis]
          Length = 284

 Score = 43.6 bits (101), Expect = 0.029,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 20/40 (50%), Gaps = 5/40 (12%)

Query: 4  VTVATWNVNSIR-----ARIHNLAAWIKENNPDIICLQET 38
          + + +WN++ +      AR  ++   +    PD++ LQE 
Sbjct: 34 LKLVSWNIDGLNDKEIQARTLSICNALNGLEPDVVFLQEV 73


>gi|330972149|gb|EGH72215.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv.
           aceris str. M302273PT]
          Length = 291

 Score = 43.6 bits (101), Expect = 0.030,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 14/61 (22%)

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           +F  +            +DHI+LSP  T  L   ++  +P      SDH PV V + +P+
Sbjct: 230 TFPSWRPQ-------RCLDHILLSPTLT--LERVQVLAQP-----ISDHLPVAVEIRLPD 275

Query: 266 P 266
            
Sbjct: 276 S 276


>gi|330952069|gb|EGH52329.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae Cit 7]
          Length = 291

 Score = 43.6 bits (101), Expect = 0.030,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 14/61 (22%)

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           +F  +            +DHI+LSP  T  L   ++  +P      SDH PV V + +P+
Sbjct: 230 TFPSWRPQ-------RCLDHILLSPTLT--LERVQVLAQP-----ISDHLPVAVEIRLPD 275

Query: 266 P 266
            
Sbjct: 276 S 276


>gi|330938836|gb|EGH42355.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv. pisi
           str. 1704B]
          Length = 265

 Score = 43.6 bits (101), Expect = 0.030,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 14/61 (22%)

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           +F  +            +DHI+LSP  T  L   ++  +P      SDH PV V + +P+
Sbjct: 204 TFPSWRPQ-------RCLDHILLSPTLT--LERVQVLAQP-----ISDHLPVAVEIRLPD 249

Query: 266 P 266
            
Sbjct: 250 S 250


>gi|330901521|gb|EGH32940.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv.
           japonica str. M301072PT]
          Length = 138

 Score = 43.6 bits (101), Expect = 0.030,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 14/61 (22%)

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           +F  +            +DHI+LSP  T  L   ++  +P      SDH PV V + +P+
Sbjct: 77  TFPSWRPQ-------RCLDHILLSPTLT--LERVQVLAQP-----ISDHLPVAVEIRLPD 122

Query: 266 P 266
            
Sbjct: 123 S 123


>gi|302188968|ref|ZP_07265641.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv.
           syringae 642]
          Length = 291

 Score = 43.6 bits (101), Expect = 0.030,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 14/61 (22%)

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           +F  +            +DHI+LSP  T  L   ++  +P      SDH PV V + +P+
Sbjct: 230 TFPSWRPQ-------RCLDHILLSPTLT--LERVQVLAQP-----ISDHLPVAVEIRLPD 275

Query: 266 P 266
            
Sbjct: 276 S 276


>gi|294790312|ref|ZP_06755470.1| endonuclease/exonuclease/phosphatase family protein [Scardovia
           inopinata F0304]
 gi|294458209|gb|EFG26562.1| endonuclease/exonuclease/phosphatase family protein [Scardovia
           inopinata F0304]
          Length = 273

 Score = 43.6 bits (101), Expect = 0.030,   Method: Composition-based stats.
 Identities = 38/255 (14%), Positives = 69/255 (27%), Gaps = 23/255 (9%)

Query: 21  LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80
           L++ IK+   DII L E   +  N       + +Y IE             +        
Sbjct: 18  LSSVIKDQQIDIIVLAEYCADKDNLFTSIRANQDYFIEYMTLGCNRINIWGNYRNVEP-- 75

Query: 81  THLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQ 140
               G +     + I  T+ +    L                +   K          + +
Sbjct: 76  ---RGQNSYYSIQVINNTYVLCGLHLISDLHGDNSEERFAKIREIIKDVHDTEEEINSFK 132

Query: 141 RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHD 200
            + + +         ++        P +        +     +++  N    +       
Sbjct: 133 SIIVGDFNDMPYSKGLLNADGFHGLPALKTTKKKTRMVSGTLYREYYN-PMWNFFGDFSA 191

Query: 201 THHLYSFWDYYADSWSKNKGIRI-DHIMLSPEATSLLH------------SARIDTKPRG 247
               Y    YY +S   +    I D  +LS E    L                 D   R 
Sbjct: 192 PPGTY----YYNNSKLYSPMWYILDQFLLSRELAPNLVIDQLKIITECSHGTLYDKNDRP 247

Query: 248 WTKPSDHTPVIVSLD 262
            TK SDH P++  +D
Sbjct: 248 NTKISDHFPIMCEID 262


>gi|289674481|ref|ZP_06495371.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv.
           syringae FF5]
          Length = 269

 Score = 43.6 bits (101), Expect = 0.030,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 14/61 (22%)

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           +F  +            +DHI+LSP  T  L   ++  +P      SDH PV V + +P+
Sbjct: 208 TFPSWRPQ-------RCLDHILLSPTLT--LERVQVLAQP-----ISDHLPVAVEIRLPD 253

Query: 266 P 266
            
Sbjct: 254 S 254


>gi|71737405|ref|YP_272561.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. phaseolicola 1448A]
 gi|257481811|ref|ZP_05635852.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. tabaci ATCC 11528]
 gi|289627987|ref|ZP_06460941.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. aesculi str. NCPPB3681]
 gi|289646455|ref|ZP_06477798.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. aesculi str. 2250]
 gi|298485207|ref|ZP_07003300.1| Endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|71557958|gb|AAZ37169.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. phaseolicola 1448A]
 gi|298160195|gb|EFI01223.1| Endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|320322199|gb|EFW78295.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. glycinea str. B076]
 gi|320331850|gb|EFW87788.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. glycinea str. race 4]
 gi|330866580|gb|EGH01289.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. aesculi str. 0893_23]
 gi|330872976|gb|EGH07125.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. glycinea str. race 4]
 gi|330986813|gb|EGH84916.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. lachrymans str. M301315]
 gi|331009446|gb|EGH89502.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. tabaci ATCC 11528]
          Length = 291

 Score = 43.6 bits (101), Expect = 0.030,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 14/61 (22%)

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           +F  +            +DHI+LSP  T  L   ++  +P      SDH PV V + +P+
Sbjct: 230 TFPSWRPQ-------RCLDHILLSPTLT--LERVQVLAQP-----ISDHLPVAVEIRLPD 275

Query: 266 P 266
            
Sbjct: 276 S 276


>gi|66043537|ref|YP_233378.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv.
           syringae B728a]
 gi|63254244|gb|AAY35340.1| Endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv.
           syringae B728a]
          Length = 291

 Score = 43.6 bits (101), Expect = 0.030,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 14/61 (22%)

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           +F  +            +DHI+LSP  T  L   ++  +P      SDH PV V + +P+
Sbjct: 230 TFPSWRPQ-------RCLDHILLSPTLT--LERVQVLAQP-----ISDHLPVAVEIRLPD 275

Query: 266 P 266
            
Sbjct: 276 S 276


>gi|328765816|gb|EGF75929.1| hypothetical protein BATDEDRAFT_28958 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 579

 Score = 43.6 bits (101), Expect = 0.030,   Method: Composition-based stats.
 Identities = 15/81 (18%), Positives = 27/81 (33%), Gaps = 12/81 (14%)

Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT--- 243
                   +    +    Y++       +  N  + +DHI++S           I     
Sbjct: 45  HEGEHMTNMINKVEDGDRYTY------LFQGNSQV-LDHILVSNNLAE-ATEIDILHINA 96

Query: 244 KPRGWT-KPSDHTPVIVSLDI 263
                  + SDH PV+V LD+
Sbjct: 97  DFTDMAGRASDHDPVMVKLDL 117


>gi|167893940|ref|ZP_02481342.1| endonuclease/exonuclease/phosphatase family superfamily protein
           [Burkholderia pseudomallei 7894]
          Length = 139

 Score = 43.6 bits (101), Expect = 0.030,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 4/38 (10%)

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           D   ++      L    ID    G  + SDH P+++ L
Sbjct: 103 DFAFVTDTLVRRLSRCEID----GTVRASDHQPIVLEL 136


>gi|145546428|ref|XP_001458897.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124426719|emb|CAK91500.1| unnamed protein product [Paramecium tetraurelia]
          Length = 172

 Score = 43.6 bits (101), Expect = 0.030,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 3/38 (7%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETK 39
           + + +  WN++SI+    N    I++  P +ICLQE +
Sbjct: 92  TKLKILCWNISSIK---KNTFQEIQQQKPHLICLQEVR 126


>gi|224113265|ref|XP_002332611.1| predicted protein [Populus trichocarpa]
 gi|222832812|gb|EEE71289.1| predicted protein [Populus trichocarpa]
          Length = 422

 Score = 43.6 bits (101), Expect = 0.030,   Method: Composition-based stats.
 Identities = 29/236 (12%), Positives = 66/236 (27%), Gaps = 33/236 (13%)

Query: 5   TVATWNVNSIR------ARIHNLAAWIKENNPDIICLQETKTED--KNFPF-ETLQSLNY 55
            + ++NV   R       R+  L   I+ ++PD+ICLQE    D    F      ++   
Sbjct: 155 KILSYNVW-FREDLEMHRRMKALGELIQLHSPDVICLQEV-IPDIYDIFQRSSWWKAYQC 212

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
            + +    S     +     P++  +  P  +  +      A   +  +   +       
Sbjct: 213 SVSSEIASSRGYFCMQLSKLPVKSFSTKPFMNSIMGRELCIAELEVPGKKSLVVATSHLE 272

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
                  K+D   S  +      +  L  +   +             C +    +     
Sbjct: 273 SPCPAPPKWDQMFSKERVDQAKEAINLLKKNSNVIF-----------CGDMNWDDKLDGQ 321

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI--RIDHIMLS 229
                        +             + +++        S N+ +  R+D  + S
Sbjct: 322 FPFPDGWVDAWVELK---------PGDNGWTYDTKSNQMLSGNRALQKRLDRFICS 368


>gi|147787725|emb|CAN71912.1| hypothetical protein VITISV_018965 [Vitis vinifera]
          Length = 1856

 Score = 43.6 bits (101), Expect = 0.030,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 22/60 (36%), Gaps = 7/60 (11%)

Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
               +++    +         R+D  ++SP       S    T+ R     SDH P+I+ 
Sbjct: 299 QGGSFTW----SGGLHNQAWARLDRFLVSPSWLDQFSSV---TQKRLSRPISDHFPIIIE 351


>gi|4902834|emb|CAB43589.1| unnamed protein product [Homo sapiens]
          Length = 152

 Score = 43.6 bits (101), Expect = 0.030,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 18/44 (40%), Gaps = 5/44 (11%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEP 266
           IDHI+ S    S      I T        SDH+ + + L I  P
Sbjct: 112 IDHILGSKALLSKCKRTEIITNYL-----SDHSAIKLELRIKNP 150


>gi|325189192|emb|CCA23715.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 283

 Score = 43.6 bits (101), Expect = 0.031,   Method: Composition-based stats.
 Identities = 39/270 (14%), Positives = 77/270 (28%), Gaps = 33/270 (12%)

Query: 6   VATWNVNSIRA---------RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN-- 54
           V ++NV +  A         R   L  +I+  NPD I  QE     + F F   Q+L   
Sbjct: 22  VISYNVRTSNAPDVSYPWTDRKQQLQPFIEAENPDFIGTQE--ASPEQFEF-FQQALGDT 78

Query: 55  YHIETCGQKSYNGV---AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
           Y I               ++ K      +        D Q      T+ +  +       
Sbjct: 79  YGITGECAGECYENERPFLMYKKSEWNSLEFGSFALSDRQEIRGSNTWNLEYKRSVSWQR 138

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
           +    N I+   ++      K  L  +   ++    +  + D+ I+    +        +
Sbjct: 139 FQHKSNSISICLFNTHFDMTKGHLESSKLIVQERSKICKSFDFFILTGDLNANLQDDAIH 198

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
                  +    Q     G             +++     +  +        D+I + P 
Sbjct: 199 YLKGIPLISTLQQCGYQGGTFIG-------PGVFTG-PLSSAVF--------DYIFIQPN 242

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
               +  + I    R     +DH  V  + 
Sbjct: 243 ENIRIIGSSIIDSRRNGQAITDHAIVKTTF 272


>gi|229587662|ref|YP_002869781.1| putative endonuclease/exonuclease/phosphatase family protein
           [Pseudomonas fluorescens SBW25]
 gi|229359528|emb|CAY46369.1| putative endonuclease/exonuclease/phosphatase family protein
           [Pseudomonas fluorescens SBW25]
          Length = 292

 Score = 43.6 bits (101), Expect = 0.031,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 14/59 (23%)

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
           +F  +            +DHI+LSP  T  L S ++  +P      SDH PV V + +P
Sbjct: 228 TFPSWRPQ-------RCLDHILLSPTLT--LESVQVLAQP-----ISDHLPVAVEIRLP 272


>gi|167765272|ref|ZP_02437385.1| hypothetical protein BACSTE_03660 [Bacteroides stercoris ATCC
           43183]
 gi|167696900|gb|EDS13479.1| hypothetical protein BACSTE_03660 [Bacteroides stercoris ATCC
           43183]
          Length = 287

 Score = 43.6 bits (101), Expect = 0.031,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 20/40 (50%), Gaps = 2/40 (5%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
           ID++ +  +    +    +  +  G    SDH PV+V+++
Sbjct: 250 IDYVFVRNDL--KVLRYGVLAETEGSEFLSDHAPVLVTVE 287


>gi|146284370|ref|YP_001174523.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           stutzeri A1501]
 gi|145572575|gb|ABP81681.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           stutzeri A1501]
 gi|327482753|gb|AEA86063.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           stutzeri DSM 4166]
          Length = 289

 Score = 43.6 bits (101), Expect = 0.031,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 25/66 (37%), Gaps = 14/66 (21%)

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           +F  +            +DHI+LSP  T  L    +          SDH PV V + +P+
Sbjct: 229 TFPSWRPQ-------RCLDHILLSPSLT--LERVDVL-----ALPISDHLPVAVEIRLPD 274

Query: 266 PRKKQQ 271
             +   
Sbjct: 275 SLRADS 280


>gi|108762628|ref|YP_630932.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus
          xanthus DK 1622]
 gi|108466508|gb|ABF91693.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus
          xanthus DK 1622]
          Length = 254

 Score = 43.6 bits (101), Expect = 0.031,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 31/77 (40%), Gaps = 10/77 (12%)

Query: 4  VTVATWNVN-SI----RARIHNLAAWIKENNPDIICLQET---KT--EDKNFPFETLQSL 53
          + + ++N++  I    R  +  + A ++E + DI+ LQE    +     ++ P      L
Sbjct: 3  LRLVSYNIHSGIGTDGRFDLGRVGAVLREVDADIVALQEVGDFRAVTPREDQPEHLADML 62

Query: 54 NYHIETCGQKSYNGVAI 70
            H+        NG   
Sbjct: 63 GLHMAFGPNVVRNGRRY 79


>gi|168752009|ref|ZP_02777031.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli O157:H7 str. EC4113]
 gi|168756575|ref|ZP_02781582.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli O157:H7 str. EC4401]
 gi|168767291|ref|ZP_02792298.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli O157:H7 str. EC4486]
 gi|168777230|ref|ZP_02802237.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli O157:H7 str. EC4196]
 gi|168779334|ref|ZP_02804341.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli O157:H7 str. EC4076]
 gi|195936830|ref|ZP_03082212.1| DNase [Escherichia coli O157:H7 str. EC4024]
 gi|208815890|ref|ZP_03257069.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli O157:H7 str. EC4045]
 gi|208822066|ref|ZP_03262385.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli O157:H7 str. EC4042]
 gi|209396778|ref|YP_002269459.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli O157:H7 str. EC4115]
 gi|254791984|ref|YP_003076821.1| putative DNase [Escherichia coli O157:H7 str. TW14359]
 gi|187767486|gb|EDU31330.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli O157:H7 str. EC4196]
 gi|188014050|gb|EDU52172.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli O157:H7 str. EC4113]
 gi|189003112|gb|EDU72098.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli O157:H7 str. EC4076]
 gi|189356304|gb|EDU74723.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli O157:H7 str. EC4401]
 gi|189363397|gb|EDU81816.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli O157:H7 str. EC4486]
 gi|208732538|gb|EDZ81226.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli O157:H7 str. EC4045]
 gi|208737551|gb|EDZ85234.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli O157:H7 str. EC4042]
 gi|209158178|gb|ACI35611.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli O157:H7 str. EC4115]
 gi|209775986|gb|ACI86305.1| hypothetical protein ECs0868 [Escherichia coli]
 gi|254591384|gb|ACT70745.1| predicted DNase [Escherichia coli O157:H7 str. TW14359]
          Length = 253

 Score = 43.6 bits (101), Expect = 0.031,   Method: Composition-based stats.
 Identities = 34/267 (12%), Positives = 64/267 (23%), Gaps = 32/267 (11%)

Query: 5   TVATWNVN-SI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN--YH 56
            V T N++        R  +  L   ++  + DI+CLQE            +++     H
Sbjct: 11  KVLTINIHKGFTAFNRRFILPELRDAVRTVSADIVCLQEV-MGAHEVHPLHVENWPDTSH 69

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
            E      ++  A        E               +     +++    R         
Sbjct: 70  YEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVP 129

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
                  +   +    R     +Q   L E +    D   +    D  +     N     
Sbjct: 130 PMTGKAIHVMCVHLGLREAHRQAQLAMLAEWVNELPDGEPVLVAGDFNDWRQKANHPLKV 189

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
                      +                                +R+D I +     +  
Sbjct: 190 QAGLDEIFTRAHGRPARTFPVQFPL-------------------LRLDRIYV----KNTS 226

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263
            SA      R W   SDH P+   + +
Sbjct: 227 ASAPTALPLRTWRHLSDHAPLSAEIHL 253


>gi|269796550|ref|YP_003316005.1| metal-dependent hydrolase [Sanguibacter keddieii DSM 10542]
 gi|269098735|gb|ACZ23171.1| metal-dependent hydrolase [Sanguibacter keddieii DSM 10542]
          Length = 251

 Score = 43.6 bits (101), Expect = 0.032,   Method: Composition-based stats.
 Identities = 10/35 (28%), Positives = 22/35 (62%)

Query: 3  VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQE 37
           + V ++NV S++     +   I+E++PD++ +QE
Sbjct: 18 TLRVLSYNVKSLQMDAAAVRDVIRESDPDVVAIQE 52



 Score = 37.1 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 20/41 (48%), Gaps = 3/41 (7%)

Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
            RID +++       + S+ +   P    + SDH P++V L
Sbjct: 209 RRIDGVLVGDGFE--VLSSTVLRTP-AALRGSDHLPLLVEL 246


>gi|170747161|ref|YP_001753421.1| endonuclease/exonuclease/phosphatase [Methylobacterium
           radiotolerans JCM 2831]
 gi|170653683|gb|ACB22738.1| Endonuclease/exonuclease/phosphatase [Methylobacterium
           radiotolerans JCM 2831]
          Length = 261

 Score = 43.6 bits (101), Expect = 0.032,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 35/77 (45%), Gaps = 10/77 (12%)

Query: 5   TVATWNVNSIR---ARIHNLAAWIKENNPDIICLQE-TKTEDKNFPFETLQSLNYHIETC 60
            + +WN+  +R   A + ++AA + +  PD++ +QE T+     F  + +    ++    
Sbjct: 31  KIVSWNL--LRRTGAAVDDVAALVAQERPDLLLMQEATRAI--GFLLDRIG--GHYAWAP 84

Query: 61  GQKSYNGVAILSKYQPI 77
                +G+A+ S     
Sbjct: 85  LPGRIHGLAMWSPKPWT 101


>gi|147811286|emb|CAN61231.1| hypothetical protein VITISV_041719 [Vitis vinifera]
          Length = 996

 Score = 43.6 bits (101), Expect = 0.032,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 23/61 (37%), Gaps = 9/61 (14%)

Query: 201 THHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
               Y++          N+   R+D  +++P       S+ I    R     SDH PV++
Sbjct: 69  QGGDYTW-----SGGPNNRYWARLDRFLVTPSWMDQF-SSVIQK--RLPRPASDHFPVVL 120

Query: 260 S 260
            
Sbjct: 121 E 121


>gi|261856746|ref|YP_003264029.1| endonuclease/exonuclease/phosphatase [Halothiobacillus neapolitanus
           c2]
 gi|261837215|gb|ACX96982.1| Endonuclease/exonuclease/phosphatase [Halothiobacillus neapolitanus
           c2]
          Length = 286

 Score = 43.6 bits (101), Expect = 0.032,   Method: Composition-based stats.
 Identities = 23/292 (7%), Positives = 64/292 (21%), Gaps = 64/292 (21%)

Query: 1   MSVVTVATWNV--------------NSIR---------ARIHNLAAWIKENNPDIICLQE 37
           +  + + ++N+              N  +           + ++A  +  +  D+I LQE
Sbjct: 29  LRPLRLLSYNIQAGIGTRNFRDYVLNGWKHVLPFPKRMQNLDHIAQLL--SQFDLIGLQE 86

Query: 38  TKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA 97
              +  +     L  + Y         +            +    +              
Sbjct: 87  --ADGGSLRSHFLNQIEYLAMRSNMPFWATRINRDLGHWGQHALGMLSRVEPYHIERYAL 144

Query: 98  TFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII 157
              I  + + + +                          +  +       L  +      
Sbjct: 145 PARIPGRGVVLADFDW-----------------------YGQRVRVQVSHLSLSDRARRA 181

Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK 217
                      ++       +   +                       ++  +       
Sbjct: 182 QLDRLIARCREFDGVNIVMADFNCTPNNRDLQRLCLEAGLKLPFAPPLTYPSWEPK---- 237

Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKK 269
                IDHI++S           I++        SDH P+ + + +P     
Sbjct: 238 ---RAIDHILVSENI-------EIESVDALTYGVSDHAPLSMQIKLPPVSNH 279


>gi|149199714|ref|ZP_01876746.1| endonuclease/exonuclease/phosphatase family protein [Lentisphaera
           araneosa HTCC2155]
 gi|149137231|gb|EDM25652.1| endonuclease/exonuclease/phosphatase family protein [Lentisphaera
           araneosa HTCC2155]
          Length = 319

 Score = 43.6 bits (101), Expect = 0.032,   Method: Composition-based stats.
 Identities = 35/294 (11%), Positives = 83/294 (28%), Gaps = 27/294 (9%)

Query: 2   SVVTVATWNVNSIRA------RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55
           + + V ++N+   R        +   A  I+E   DI+ +QE ++       +  + L++
Sbjct: 27  AKLRVMSYNI--YRGGEMFGRELSQTAKVIQEAEADIVGIQEPRSPKGFTTQKLAKLLDW 84

Query: 56  HIETCGQKSYNGVAI--LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
           +  +  +K         +        +    G ++   +  + +      Q L I   + 
Sbjct: 85  NHSSNIRKGIILTPYEIIENLDGGVKIKLPTGQEVYAFSLHLPSHPYQPYQLLGIRPKWH 144

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELE----------EPLIFAGDYNIIPQPHDC 163
            + N I   K + +     +  R A  +  L+             +              
Sbjct: 145 KNTNNIEFIKTEAEAIEWAKKARGAEIKKLLKVISSLPDKEAPVFVVGDFNEPSHLDWTE 204

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223
                  +          +  K         I      +   ++   Y          RI
Sbjct: 205 AAAKAGRHPIKVAYPNSVAMVKAGFSDSYRVIYPDEMKNPGLTWSPKYKADDPTTHLDRI 264

Query: 224 DHIMLSPEATSLLHSARI------DTKPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271
           D +         +  A+I      +        PSDH  V+ +  + +    ++
Sbjct: 265 DFVYF-KGKGLKVTDAKIIGENSENADIVVTPYPSDHRAVVATFTLDKASALKE 317


>gi|146310939|ref|YP_001176013.1| endonuclease/exonuclease/phosphatase [Enterobacter sp. 638]
 gi|145317815|gb|ABP59962.1| Endonuclease/exonuclease/phosphatase [Enterobacter sp. 638]
          Length = 253

 Score = 43.6 bits (101), Expect = 0.032,   Method: Composition-based stats.
 Identities = 29/268 (10%), Positives = 63/268 (23%), Gaps = 32/268 (11%)

Query: 4   VTVATWNVN-SI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN--Y 55
           + + T N +        R  +  L   ++    DI+CLQE            +++     
Sbjct: 10  LKILTINTHKGFTAFNRRFILPELRDAVRTVGADIVCLQEV-MGAHEIHPMHVENWPDTT 68

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
           H E      ++  A        E               +     ++     R        
Sbjct: 69  HYEFLADTMWSDYAYGRNAVYPEGHHGNAVLSRFPIEHYENRDVSVGESEKRGLLYCRIT 128

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
              +    +   +    R     +Q   + + +    +   +    D  +     N    
Sbjct: 129 PPELAFPIHVGCVHLGLREAHRQAQLNMMAKWVNALPEGEPVVVAGDFNDWRQRANHPLK 188

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
                       +         +                      +R+D I +     S 
Sbjct: 189 AQAGLDEIFTRAHGRPARTFPVSFPV-------------------LRLDRIYVKNAHASS 229

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             +       R W   SDH P+   + +
Sbjct: 230 PTA----LALRTWRHLSDHAPLSAEIHL 253


>gi|298245685|ref|ZP_06969491.1| Endonuclease/exonuclease/phosphatase [Ktedonobacter racemifer DSM
           44963]
 gi|297553166|gb|EFH87031.1| Endonuclease/exonuclease/phosphatase [Ktedonobacter racemifer DSM
           44963]
          Length = 340

 Score = 43.6 bits (101), Expect = 0.032,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 24/59 (40%), Gaps = 5/59 (8%)

Query: 222 RIDHIMLSPEATSLLHSAR-ID--TKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQN 277
           RID+I  +PE    L   + I       G    SDH  +  S  I +P K     T++ 
Sbjct: 280 RIDYIFATPELAQRLEQCQPILMGNGVLGSA-ASDHLAMTASF-ISQPSKTTTQPTTEE 336


>gi|302897971|ref|XP_003047751.1| hypothetical protein NECHADRAFT_72444 [Nectria haematococca mpVI
           77-13-4]
 gi|256728682|gb|EEU42038.1| hypothetical protein NECHADRAFT_72444 [Nectria haematococca mpVI
           77-13-4]
          Length = 305

 Score = 43.6 bits (101), Expect = 0.032,   Method: Composition-based stats.
 Identities = 39/288 (13%), Positives = 72/288 (25%), Gaps = 38/288 (13%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNP-DI--------------------ICLQETKTED 42
           + + T+NV   R    N         P D+                    ICLQE     
Sbjct: 26  LRIVTFNV---RYATTNFEP---HEKPWDVRCPKLVNQLSFITAGHESPFICLQEC-LYP 78

Query: 43  KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQP---IEIVTHLPGDDLDVQARFIEATF 99
           +    ++     +     G+ S       S                  L          +
Sbjct: 79  QVKDIQSRLGDGWSHIGRGRGSGEHDGEFSPIFYRSDNWSCERSEVRWLSKTPFEPSRGW 138

Query: 100 TINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159
                 +     +L  G              I    R  S +L ++    +       P 
Sbjct: 139 DAVLNRIVTMGEFLHRGTGTRVIVMSTHFDHIGVKARENSAKLLIKFAREWGSGGVGSPS 198

Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK 219
                       +      +      + ++       A +     Y+ +       S  +
Sbjct: 199 AVLVGGDFNSSPNDGGYKIMTAPDSGMSDISHLLPKSAHYGNQITYTSF---GKYDSSGE 255

Query: 220 GI---RIDHIMLSPEATSLLHSARIDTKPRGWT-KPSDHTPVIVSLDI 263
           G    RID + +    T+ + +  +         + SDH PV+  LDI
Sbjct: 256 GWEEARIDFLFIQEPRTAHVKTFGVLANFFDDDVRVSDHRPVVSDLDI 303


>gi|170690563|ref|ZP_02881730.1| Endonuclease/exonuclease/phosphatase [Burkholderia graminis
          C4D1M]
 gi|170144998|gb|EDT13159.1| Endonuclease/exonuclease/phosphatase [Burkholderia graminis
          C4D1M]
          Length = 258

 Score = 43.6 bits (101), Expect = 0.033,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 19/41 (46%), Gaps = 7/41 (17%)

Query: 4  VTVATWNVNSI------RARIHNLAAWIKENNPDIICLQET 38
          + + T+N++        R+    +A  I   N D++ LQE 
Sbjct: 34 LRIVTYNIHGAVGTDGKRSAA-RIAEVIAALNADVVALQEV 73



 Score = 36.3 bits (82), Expect = 5.4,   Method: Composition-based stats.
 Identities = 10/76 (13%), Positives = 23/76 (30%), Gaps = 10/76 (13%)

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             +        +          +F      +++      +D + + P   + L    +D 
Sbjct: 189 WFVWGWPLRALLTRFGRVAAPRTFPS-RFPAFA------LDRVWVHP--AARLVDIEVDR 239

Query: 244 KPRGWTKPSDHTPVIV 259
             R     SDH P++ 
Sbjct: 240 S-RPARIASDHLPLVA 254


>gi|114624073|ref|XP_001149897.1| PREDICTED: hypothetical protein [Pan troglodytes]
          Length = 373

 Score = 43.6 bits (101), Expect = 0.033,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 26/77 (33%), Gaps = 10/77 (12%)

Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR 246
                 D  R  H     Y+F      ++SK     IDHI+ S    S      I     
Sbjct: 6   HQADLIDIYRTLHPESTEYTFLSEPHCTYSK-----IDHIVGSKSLLSKCKRTEIIINCL 60

Query: 247 GWTKPSDHTPVIVSLDI 263
                SDH+ + + L I
Sbjct: 61  -----SDHSAIKLELRI 72


>gi|254382637|ref|ZP_04997995.1| endonuclease/exonuclease/phosphatase [Streptomyces sp. Mg1]
 gi|194341540|gb|EDX22506.1| endonuclease/exonuclease/phosphatase [Streptomyces sp. Mg1]
          Length = 253

 Score = 43.6 bits (101), Expect = 0.033,   Method: Composition-based stats.
 Identities = 34/270 (12%), Positives = 68/270 (25%), Gaps = 41/270 (15%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           +V+ V ++N+ S+R     LA  I+   PD++ +QE                        
Sbjct: 20  AVIRVLSYNIRSLRDDEDALARVIRACAPDLVFVQE-------------------APRFF 60

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           +   +   + SK + + +          +               L +       G     
Sbjct: 61  RWRKHAARLASKSELVVLSGGATAAGPLLLCSLRAFVERTEDVLLPMTPGLHRRGFATAV 120

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            ++      +            L +  +                     N+        +
Sbjct: 121 VRFGAVRVGVLSAHLSLDPGERLAQAGLLLERTEA--MDTPYKIAAGDFNEPPEGPAFAR 178

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
              +LQ+          H      S               RID +  S      +    +
Sbjct: 179 VAARLQDCRTVAPWGGEHTFTGGPS-------------ARRIDAVFASRGVE--VLGCGV 223

Query: 242 DTKPRG-----WTKPSDHTPVIVSLDIPEP 266
                G         +DH PV+ +L +P P
Sbjct: 224 PEGLPGVTPADLRAATDHLPVLAALRLPAP 253


>gi|170782595|ref|YP_001710928.1| hypothetical protein CMS_2252 [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169157164|emb|CAQ02344.1| conserved hypothetical protein [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 264

 Score = 43.6 bits (101), Expect = 0.033,   Method: Composition-based stats.
 Identities = 34/249 (13%), Positives = 64/249 (25%), Gaps = 28/249 (11%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQP 76
           R   LA +++   P ++ +QE        P                  ++ +    +   
Sbjct: 26  REPVLARFLQLEQPTVLGVQE--ALSAQLP-----------AIARALPHHRMLGYGRDGG 72

Query: 77  IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
                     D           F ++     IG+          +T    +         
Sbjct: 73  SGGEYSAIFYDERRLDVVAWDQFWLSDLPELIGSRSWGCSTTRIATWARFRDRRSGAEFV 132

Query: 137 FASQRLELEE---PLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQ-----N 188
             +  L+ E     +  A       Q      P++   D     E   ++  L       
Sbjct: 133 HLNTHLDHESELARVKSADLITERLQEVASGAPVVVTGDFNAPAEESAAYDILTRDAGLA 192

Query: 189 MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGW 248
             +T A          ++     A      +G RID I+        +  + I+      
Sbjct: 193 DTWTTAAHHATPGIGTFT-----AYGDPVPEGERIDWILAGDGVE--VVDSAINPYTYEG 245

Query: 249 TKPSDHTPV 257
             PSDH  V
Sbjct: 246 RSPSDHAAV 254


>gi|167815447|ref|ZP_02447127.1| endonuclease/exonuclease/phosphatase family superfamily protein
           [Burkholderia pseudomallei 91]
          Length = 118

 Score = 43.6 bits (101), Expect = 0.033,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 4/38 (10%)

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           D   ++      L    ID    G  + SDH P+++ L
Sbjct: 82  DFAFVTDTLVRRLSRCEID----GTVRASDHQPIVLEL 115


>gi|289641584|ref|ZP_06473745.1| endonuclease/exonuclease/phosphatase [Frankia symbiont of Datisca
           glomerata]
 gi|289508565|gb|EFD29503.1| endonuclease/exonuclease/phosphatase [Frankia symbiont of Datisca
           glomerata]
          Length = 85

 Score = 43.6 bits (101), Expect = 0.033,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 7/43 (16%)

Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +RIDH++ SP+    +   ++     G    SDH P++V L +
Sbjct: 49  LRIDHVLASPQFA--VTGYQV-----GNKIGSDHKPLVVDLAL 84


>gi|166710588|ref|ZP_02241795.1| hypothetical protein Xoryp_03765 [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 245

 Score = 43.6 bits (101), Expect = 0.033,   Method: Composition-based stats.
 Identities = 15/95 (15%), Positives = 30/95 (31%), Gaps = 14/95 (14%)

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
             +A    +      + +        R    +  +++F  +  D         IDHI++S
Sbjct: 160 HPNAMLMGDFNCMADRPEMQSLYRHTRLQPPSCEVHTFPSWRPD-------RAIDHILVS 212

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
                      I+         SDH  V + + +P
Sbjct: 213 DRLV-------IEHTEATPAAFSDHLAVGMDIRVP 240


>gi|68065240|ref|XP_674604.1| hypothetical protein [Plasmodium berghei strain ANKA]
 gi|56493285|emb|CAI01530.1| hypothetical protein PB401683.00.0 [Plasmodium berghei]
          Length = 108

 Score = 43.6 bits (101), Expect = 0.033,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 21/41 (51%), Gaps = 2/41 (4%)

Query: 6  VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKN 44
          + +  +N + + I    L  W+ + +P   CLQET   +K+
Sbjct: 17 LISLTINGLHSPIKRHRLTDWLHKQDPTFCCLQETHLREKD 57


>gi|50289263|ref|XP_447062.1| hypothetical protein [Candida glabrata CBS 138]
 gi|74609806|sp|Q6FRT2|CCR4_CANGA RecName: Full=Glucose-repressible alcohol dehydrogenase
           transcriptional effector; AltName: Full=Carbon
           catabolite repressor protein 4; AltName:
           Full=Cytoplasmic deadenylase
 gi|49526371|emb|CAG59995.1| unnamed protein product [Candida glabrata]
          Length = 873

 Score = 43.6 bits (101), Expect = 0.033,   Method: Composition-based stats.
 Identities = 36/286 (12%), Positives = 71/286 (24%), Gaps = 46/286 (16%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTED-KNFPFETLQSLNY----HIETCGQKSYNGVAIL 71
           R   L   I   N DIICLQE + +  ++F    L+   Y    H +T  +   +  +  
Sbjct: 569 RREKLKEQILNFNTDIICLQEVEAKTFEDFWQPLLEKHGYTGLFHAKTRAKTMQSKDSKK 628

Query: 72  SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWI 131
                    T            F                L         +     +    
Sbjct: 629 VDGCCAFYKTSKFKMLFKECVDFSGLWMKHKKFQRTEDYLNRAMNKDNVAIVMKLQHIQS 688

Query: 132 KRFLRFASQRLELEEPLI---------FAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
              +   +  L  +                    + +  +    +               
Sbjct: 689 GEIMWLVTTHLHWDPKFNDVKTFQVGVLLDHMETLLKEQNPKQDVKKYPLVICGDLNSYL 748

Query: 183 FQKLQNMGFTDAIRATHDTHHL-YSFWDYYADSWSKNKGIR------------------- 222
              +  +  T  ++  HD     + ++    D++S N  ++                   
Sbjct: 749 SSSVYELFSTGRVQHHHDGKDRDFGYFS--EDNFSHNLALKSSYNCIGELAFTNFTPSFT 806

Query: 223 --IDHIM-LSPEATSLLHSARIDTKPRGW-------TKPSDHTPVI 258
             ID+I   S           +D++             PSDH P++
Sbjct: 807 DVIDYIWFSSQALRVRGLLGEVDSEYVSNFIGFPNDKFPSDHIPLL 852


>gi|305667408|ref|YP_003863695.1| hypothetical protein FB2170_14213 [Maribacter sp. HTCC2170]
 gi|88709456|gb|EAR01689.1| hypothetical protein FB2170_14213 [Maribacter sp. HTCC2170]
          Length = 252

 Score = 43.6 bits (101), Expect = 0.033,   Method: Composition-based stats.
 Identities = 43/283 (15%), Positives = 75/283 (26%), Gaps = 59/283 (20%)

Query: 7   ATWN---------VNSIRARIHNLAAWIKENNPDIICLQE-----TKTEDKNFPFETLQS 52
            T+N         VN+   R  +L   I+   P I   QE      K  D+  P  +   
Sbjct: 1   MTYNIKYDNKKDTVNNWNDRKASLVRLIRHYEPSIFGTQEALHHQVKYIDEELPDFSFIG 60

Query: 53  LN---------Y---HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT 100
           +          Y   H      K  +         P +I          +    +     
Sbjct: 61  VGRDDGKQKGEYSSIHYNHTKYKVLSSNTFWLSKTPNKISVGWDASMERICTYGLFEELE 120

Query: 101 INTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP 160
            +         +   G          +    K  L+   +      P+I  GD+N+ P  
Sbjct: 121 TSNTFYVFNTHFDHRGKKA-------REKSAKLILKKIKKINSSNLPVILMGDFNLNPVE 173

Query: 161 HDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG 220
               +      D     +           GF   ++  +                     
Sbjct: 174 KPIKSIKKVMVDGLDATQKPFYGPSGTFNGFNPTMKLDN--------------------- 212

Query: 221 IRIDHIMLSPEATSLLHS-ARIDTKPRGWTKPSDHTPVIVSLD 262
            RID+I +       + S   ID +       SDH PV++ ++
Sbjct: 213 -RIDYIFV-KNI--KVKSYTHIDDRMENNKHISDHLPVLIHIE 251


>gi|94311051|ref|YP_584261.1| endonuclease/exonuclease/phosphatase [Cupriavidus metallidurans
           CH34]
 gi|93354903|gb|ABF08992.1| Metal-dependent hydrolase [Cupriavidus metallidurans CH34]
          Length = 284

 Score = 43.6 bits (101), Expect = 0.033,   Method: Composition-based stats.
 Identities = 32/305 (10%), Positives = 79/305 (25%), Gaps = 66/305 (21%)

Query: 4   VTVATWNV------NSIRARIHNLAAWIKE-NNPDIICLQET---------KTEDKNFPF 47
           + + +WN+      +  +  +  +   ++   + D++CLQE                   
Sbjct: 1   MELISWNIQWGRGADG-KVDLARIVDTLRGMADADVLCLQEITRGFSDLAGHPGPDQVAE 59

Query: 48  ETLQSLNYHIETCG---------QKSYNGVAILSKYQPIEIVTHLPGDDLD-----VQAR 93
            +    +Y +                  G  I ++    EI  H      D     +   
Sbjct: 60  LSALLPDYQVIFAPGVDRTHRDGSPRQFGNVIATRLPVREIFRHALPWPADPDVASMPRV 119

Query: 94  FIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLI---- 149
            +E T    ++ LRI   +L + +        + +          ++     E       
Sbjct: 120 ALEVTVQAGSRLLRIICTHLEYYSTSQRAAQTEALRDWHVQACDHARHPGRSENRPGPFT 179

Query: 150 ---------FAGDYNIIPQPHDCYNPIIWENDA--CFTLEVRQSFQKLQNMGFTDAIRAT 198
                      GD+N  P+       +         +            +          
Sbjct: 180 PEPRPSEAILCGDFNSRPEDGAYLRMVETFGGVTPDWHDAWIHMHPGQPHAPTCALFDKE 239

Query: 199 HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVI 258
                 ++                 D + ++ +    +    ++      T  SDH P+ 
Sbjct: 240 QWPEPPFAC----------------DFVFVTDDLLGNVRRCEVND----RTDASDHQPIH 279

Query: 259 VSLDI 263
           ++ D+
Sbjct: 280 LTTDL 284


>gi|328541790|ref|YP_004301899.1| Endonuclease/exonuclease/phosphatase family [Polymorphum gilvum
           SL003B-26A1]
 gi|326411542|gb|ADZ68605.1| Endonuclease/exonuclease/phosphatase family [Polymorphum gilvum
           SL003B-26A1]
          Length = 323

 Score = 43.6 bits (101), Expect = 0.034,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 24/56 (42%), Gaps = 9/56 (16%)

Query: 217 KNKGIRIDHIMLSPEATSLLHSARID-----TKPRGWTKP----SDHTPVIVSLDI 263
           + +G  +DHI++S E        R+       + R    P    S H PV+ + ++
Sbjct: 268 RGRGHALDHILVSRELLFRARDIRVLNEGLADEVRDAGTPAEAGSFHAPVVATFEL 323



 Score = 40.9 bits (94), Expect = 0.22,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 22/48 (45%), Gaps = 10/48 (20%)

Query: 4  VTVATWNVNS----------IRARIHNLAAWIKENNPDIICLQETKTE 41
          + +AT+N+ S          ++ R+  L   +     D++CLQE   +
Sbjct: 1  MRLATFNLESFGEDDFDAEALQPRLDALRPTLLALKADVLCLQEVNAQ 48


>gi|307316912|ref|ZP_07596354.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium meliloti AK83]
 gi|306897534|gb|EFN28278.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium meliloti AK83]
          Length = 261

 Score = 43.6 bits (101), Expect = 0.034,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 21/43 (48%), Gaps = 3/43 (6%)

Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +RIDH+++       + S R+          SDH P++  LD+
Sbjct: 217 LRIDHVLVGKGVE--VASCRVHGSTLAR-SASDHLPLLAELDV 256



 Score = 40.5 bits (93), Expect = 0.26,   Method: Composition-based stats.
 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 5/40 (12%)

Query: 4  VTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQET 38
          +   T+NV+S      R     +AA I E  PD+I LQE 
Sbjct: 21 IRFLTYNVHSCFGTDRRLDPARIAAVIAECQPDVIALQEV 60


>gi|148271905|ref|YP_001221466.1| hypothetical protein CMM_0726 [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|147829835|emb|CAN00758.1| conserved hypothetical protein [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
          Length = 349

 Score = 43.6 bits (101), Expect = 0.034,   Method: Composition-based stats.
 Identities = 34/249 (13%), Positives = 64/249 (25%), Gaps = 28/249 (11%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQP 76
           R   LA +++   P ++ +QE        P                  ++ +    +   
Sbjct: 111 REPVLARFLQLEQPTVLGVQE--ALSAQLP-----------AIARALPHHRMLGYGRDGG 157

Query: 77  IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
                     D           F ++     IG+          +T    +         
Sbjct: 158 SGGEYSAIFYDERRLDVVAWDQFWLSDLPELIGSRSWGCSTTRIATWARFRDRRSGAEFV 217

Query: 137 FASQRLELEE---PLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQ-----N 188
             +  L+ E     +  A       Q      P++   D     E   ++  L       
Sbjct: 218 HLNTHLDHESELARVKSADLITERLQEVASGAPVVVTGDFNAPAEESAAYDILTRDAGLA 277

Query: 189 MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGW 248
             +T A          ++     A      +G RID I+        +  + I+      
Sbjct: 278 DTWTTAAHHATPGIGTFT-----AYGDPVPEGERIDWILAGSGVE--VVDSAINPYTFEG 330

Query: 249 TKPSDHTPV 257
             PSDH  V
Sbjct: 331 RSPSDHAAV 339


>gi|77456279|ref|YP_345784.1| endonuclease/exonuclease/phosphatase [Pseudomonas fluorescens
           Pf0-1]
 gi|77380282|gb|ABA71795.1| putative endonuclease/exonuclease/phosphatase family protein
           [Pseudomonas fluorescens Pf0-1]
          Length = 292

 Score = 43.6 bits (101), Expect = 0.034,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 14/59 (23%)

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
           +F  +            +DHI+LSP  T  L    +  +P      SDH PV V + +P
Sbjct: 228 TFPSWRPQ-------RCLDHILLSPTLT--LEKVEVLAQP-----ISDHLPVAVEIRLP 272


>gi|218190510|gb|EEC72937.1| hypothetical protein OsI_06799 [Oryza sativa Indica Group]
          Length = 1035

 Score = 43.6 bits (101), Expect = 0.034,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 9/60 (15%)

Query: 204 LYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI--DTKPRGWTKPSDHTPVIVSL 261
            Y++ D   +  S N  +R+D+ +       L  +A++   + PR     SDH P++V  
Sbjct: 735 PYTY-DNRREGRS-NVKVRLDYALADDGWRGLFSTAQVFHLSSPR-----SDHCPILVKF 787


>gi|147770408|emb|CAN62682.1| hypothetical protein VITISV_026756 [Vitis vinifera]
          Length = 757

 Score = 43.6 bits (101), Expect = 0.034,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 42/127 (33%), Gaps = 7/127 (5%)

Query: 134 FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTD 193
           F       L   E     G ++        +N I + N++     +  S ++   +    
Sbjct: 186 FWDNRVLELVGMELEAICGLWSDPWCIGGDFNMIRFPNESRRAGRLSSSMRRFSKVIDDL 245

Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253
            +R        +++    +   +     R+D  ++S +           T PR     SD
Sbjct: 246 DLRDLPLQGGPFTW----SGGLNNQAMSRLDRFLVSEDWEGHFKGVVQCTLPRSV---SD 298

Query: 254 HTPVIVS 260
           H P+++ 
Sbjct: 299 HFPILLD 305


>gi|298504828|gb|ADI83551.1| endonuclease/exonuclease/phosphatase family protein [Geobacter
           sulfurreducens KN400]
          Length = 335

 Score = 43.6 bits (101), Expect = 0.034,   Method: Composition-based stats.
 Identities = 44/332 (13%), Positives = 78/332 (23%), Gaps = 78/332 (23%)

Query: 1   MSVVTVATWNVNSI------------RARIHNLAAWIKENNPDIICLQE----------- 37
           M  V + +WNV  +            R R   +   I+E  PDI+CL E           
Sbjct: 1   MGTVKITSWNVAHLERLTRAHPTAKERRRRDAVVREIRELAPDILCLLEGPAGEAGIDLV 60

Query: 38  -----------TKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGD 86
                       K  D N+        +  I    ++     A L      +    +   
Sbjct: 61  ANDLLDGEWVAVKAADGNYATRG----DQWIWFLVRQDLADRASLLPVGTWDTFAGVSWT 116

Query: 87  DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELE- 145
                              + I +        I        I+  +R  R   +R   E 
Sbjct: 117 CHLWGEFTEGTHRHYRHPQVLILDWNGLRVEFIGLHLKSKFINQGERLWRDERERFIREA 176

Query: 146 -------------EPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192
                                +  +  P         +       E +  F  L      
Sbjct: 177 LTARIKMATEAVNVRAYIDAKFRQVGNPALFVLGDFNDGPGKEYFEEQYLFFDLIANIQG 236

Query: 193 DAI-------RATHDTHHLYSFWDYYADSW---SKNKGIRIDHIMLSPEATS-------L 235
           +             D       W      +    +   I +DHI+ +    +        
Sbjct: 237 NVFATSRFLNHGLFDIPDEL-CWTVRFRDFVQPDRRPEILLDHILFTQGLVNGSLPWQVK 295

Query: 236 LHSARIDTKPRGWTKP--------SDHTPVIV 259
            H+ +++ +               SDH PV +
Sbjct: 296 PHAGKVEHEVHELVNAGLPKDSQTSDHRPVSL 327


>gi|256419905|ref|YP_003120558.1| endonuclease/exonuclease/phosphatase [Chitinophaga pinensis DSM
           2588]
 gi|256034813|gb|ACU58357.1| Endonuclease/exonuclease/phosphatase [Chitinophaga pinensis DSM
           2588]
          Length = 367

 Score = 43.6 bits (101), Expect = 0.034,   Method: Composition-based stats.
 Identities = 31/282 (10%), Positives = 75/282 (26%), Gaps = 43/282 (15%)

Query: 5   TVATWNV-N-SIR-----ARIHN-LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56
           T+ T+N  N  +      + +   +   ++E +PDI+C+QE  T +              
Sbjct: 106 TIMTFNTSNMGLNDYREDSVLQGSIYDMLREASPDILCMQEFYTNEG------------- 152

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                        +   Y                   F       +++     +      
Sbjct: 153 PNFTNHIDSISRTLGYPYHFFTCDMSHWDYWHYGIVLFSRFPIVRSSKIPCGYSSAGSGS 212

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
           + + S       +      +  S      +  +            +  + +         
Sbjct: 213 SFLQSDILVQGDTIRVLTAQLQSYMFRGNDYDLLEKGKGTFSGIRNLASKMKHTIHKRAA 272

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWD---YYADSWSKN---KG---------I 221
              + +     +          +D    Y++        D++ K+    G         +
Sbjct: 273 QSRKMAELIAASPYKVVVCGDFNDPPVSYTYNTISANMQDAFLKDGFGVGRTLSFLAPTL 332

Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           RID+I+        + S +  T  R   +   H P++  L +
Sbjct: 333 RIDYILAQKPI--RVKSYK--TFHRKGFQ---HFPIMAGLSL 367


>gi|28269466|gb|AAO38009.1| putative reverse transcriptase [Oryza sativa Japonica Group]
 gi|28875978|gb|AAO59987.1| putative reverse transcriptase [Oryza sativa Japonica Group]
 gi|108709646|gb|ABF97441.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1349

 Score = 43.6 bits (101), Expect = 0.034,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 2/38 (5%)

Query: 6   VATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTE 41
           +  WNV  +   A+  N+   + +    ++CLQETK E
Sbjct: 331 ILNWNVRGLNSQAKQDNVKLLVDQMKATVVCLQETKME 368


>gi|189464427|ref|ZP_03013212.1| hypothetical protein BACINT_00769 [Bacteroides intestinalis DSM
           17393]
 gi|189438217|gb|EDV07202.1| hypothetical protein BACINT_00769 [Bacteroides intestinalis DSM
           17393]
          Length = 277

 Score = 43.6 bits (101), Expect = 0.034,   Method: Composition-based stats.
 Identities = 36/272 (13%), Positives = 79/272 (29%), Gaps = 32/272 (11%)

Query: 6   VATWNV---------NSIRARIHNLAAWIKENNPDIICLQET---KTEDKNFPFETLQSL 53
           V T+N+         N+ + R  N+   I    PD++ +QE    + ED         +L
Sbjct: 23  VMTFNIRLDAPSDSANNWKYRKDNVCKMIAYYQPDLLGMQEVCHNQMEDLKLGLPQYTAL 82

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
               +   +            +   +         +         +  +   +    +  
Sbjct: 83  GVGRDDGKEAGEYCPVFFKTDRFTLVEHGNFS-LSEQPETIGVRGWDASYNRITTWAILQ 141

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
              +      ++  +    +  R    +L L +            +    + P I   D 
Sbjct: 142 KKSDGKKLVFFNTHLDNDGKTARKEGVQLILNKI-----------KETAPHMPAIITGDF 190

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR--IDHIMLSPE 231
             T          +      +  AT      +SF D+      K    R  +D++ ++  
Sbjct: 191 NCTPGEAPLQTLEKGGMKNTSKVATVMYGPSWSFHDFGRLPMEK----RVLLDYVFVTNG 246

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             +     R+          SDH PV+V++ +
Sbjct: 247 --TKTDRYRVIQDTPENGFLSDHNPVLVNITL 276


>gi|320175211|gb|EFW50320.1| Endonuclease/Exonuclease/phosphatase family protein [Shigella
           dysenteriae CDC 74-1112]
          Length = 253

 Score = 43.6 bits (101), Expect = 0.035,   Method: Composition-based stats.
 Identities = 35/268 (13%), Positives = 64/268 (23%), Gaps = 34/268 (12%)

Query: 5   TVATWNV-------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN--Y 55
            V T N+       N  R  +  L   ++  + DI+CLQE            +++     
Sbjct: 11  KVLTINIQKGFTAFN-RRFILPELRDAVRTVSADIVCLQEV-MGAHEVHPLHVENWPDTS 68

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
           H E      ++  A        E               +     +++    R        
Sbjct: 69  HYEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIV 128

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
                   +   +    R     +Q   L E +    D   +    D  +     N    
Sbjct: 129 PPMTGKAIHVMCVHLGLREAHRQAQLAMLAEWVNELPDGEPVLVAGDFNDWRQKANHPLK 188

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
                       +                                +R+D I +     + 
Sbjct: 189 VQAGLDEIFTRAHGRPARTFPVQFPL-------------------LRLDRIYV----KNA 225

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             SA      R W   SDH P+   + +
Sbjct: 226 SASAPTALPLRTWRHLSDHAPLSAEIHL 253


>gi|323359561|ref|YP_004225957.1| hypothetical protein MTES_3113 [Microbacterium testaceum StLB037]
 gi|323275932|dbj|BAJ76077.1| hypothetical protein MTES_3113 [Microbacterium testaceum StLB037]
          Length = 340

 Score = 43.2 bits (100), Expect = 0.035,   Method: Composition-based stats.
 Identities = 37/259 (14%), Positives = 74/259 (28%), Gaps = 26/259 (10%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V TWN         ++A +  +   D++ L ET  +      E ++ +          
Sbjct: 104 LRVMTWNTAGAATSAESIAQFAVDMQADVVTLPETTIDTGTRVAELMRDMG-----RPMW 158

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +++    ++ +        +  +  D          + NT T+         G+      
Sbjct: 159 AHHAEYGVTGWGATSTTVLIRPELGDYSVIDSSLDGSSNTSTVPSAVAMPVSGDGPIIVA 218

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
                +   R       R +L+         N+I                     + +  
Sbjct: 219 ---AHAVAPREDYMTQWRSDLKWLADQCASDNVILAGDFNATIDHMTGLGVDGGTLGRCR 275

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
                 G         D   +               G  IDH+M +P+ T  +  + +  
Sbjct: 276 DTTSASGNGGVGTWPTDIPAI--------------LGAPIDHVMATPDWT--VSGSIVMR 319

Query: 244 KPRGWTKPSDHTPVIVSLD 262
              G    SDH PV+V L+
Sbjct: 320 TLDGS--GSDHRPVVVQLE 336


>gi|196005147|ref|XP_002112440.1| hypothetical protein TRIADDRAFT_25141 [Trichoplax adhaerens]
 gi|190584481|gb|EDV24550.1| hypothetical protein TRIADDRAFT_25141 [Trichoplax adhaerens]
          Length = 267

 Score = 43.2 bits (100), Expect = 0.035,   Method: Composition-based stats.
 Identities = 28/265 (10%), Positives = 56/265 (21%), Gaps = 33/265 (12%)

Query: 16  ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75
           +R H+L   I  +  DIICL            E +   +   +            + K  
Sbjct: 16  SRKHSLMQEILRSKADIICL------------EEVDHYSDFFQPILTSLDYIGFFVPKPD 63

Query: 76  PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135
              ++             F    F++      I        N +      +     +   
Sbjct: 64  SPCLLYDENNGPDGCALFFSAKKFSLILHDQFILRKNDGDTNQVAIVILLETTFLPESKK 123

Query: 136 RFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAI 195
                         +  +                 N     + +   F    N       
Sbjct: 124 ICIVCTHLKSHSSEWCENIRKEQSAFLLNKVGQLINFEYIPIIICGDFNTDPNTPTYTNF 183

Query: 196 RATHDT-----------HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH------S 238
                               ++ W +       +    ID+I  S +    +        
Sbjct: 184 ANFQPCHLKSAYALNGEEPKFTTWKFRPKCQVCHT---IDYIWFSDKFLKRVQFLAIPTM 240

Query: 239 ARIDTKPRGWT-KPSDHTPVIVSLD 262
           + I          PSDH  ++    
Sbjct: 241 SEIGPNALPAEHYPSDHMSLVAEFK 265


>gi|242034801|ref|XP_002464795.1| hypothetical protein SORBIDRAFT_01g026845 [Sorghum bicolor]
 gi|241918649|gb|EER91793.1| hypothetical protein SORBIDRAFT_01g026845 [Sorghum bicolor]
          Length = 295

 Score = 43.2 bits (100), Expect = 0.036,   Method: Composition-based stats.
 Identities = 19/155 (12%), Positives = 43/155 (27%), Gaps = 7/155 (4%)

Query: 4   VTVATWNVNSI---RARIHNLAAWIKENNPDIICLQET---KTEDKNFPFETLQSLNYHI 57
           + +  WN   +   RA +  L    +  NPD++ L ET   K + +N   +         
Sbjct: 1   MKILAWNCRGLASHRA-VRALLEVQRRENPDVLFLSETHLSKAKVENLKRKVGCEKFAIH 59

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
           E+ G+     +    +     +       D+ ++         I          +     
Sbjct: 60  ESDGRSGGLLMLWKKEVVVRPVNISQYYIDVVMEEEEEWRLTGIYGDPYHKEQTWEAMRE 119

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG 152
              S K ++     +    +     +         
Sbjct: 120 LKDSMKQEEIYWVQRARANWLKHGDKNTNFFHHFA 154


>gi|237716420|ref|ZP_04546901.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262408021|ref|ZP_06084569.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp.
           2_1_22]
 gi|229444067|gb|EEO49858.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262354829|gb|EEZ03921.1| endonuclease/exonuclease/phosphatase family [Bacteroides sp.
           2_1_22]
          Length = 289

 Score = 43.2 bits (100), Expect = 0.036,   Method: Composition-based stats.
 Identities = 31/265 (11%), Positives = 69/265 (26%), Gaps = 25/265 (9%)

Query: 4   VTVATWNVN-----SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           + VAT+N+          R   +A  I++ + +I   +E     +   +   Q  + +  
Sbjct: 45  MRVATYNLQVETGTGWTNRRERVAQLIRDYDFEICGFEE--ASWEQRSYLGTQLASDYQI 102

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
               +        +      +        LD    +   T  I +      N        
Sbjct: 103 LAYGRDTGNDDNKAGEMSGILYKKSRYTLLDAGRFWFSETPEIPSNGWDETNFKRFCVWG 162

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
                   K  ++       +         +     +   + +         N      E
Sbjct: 163 KFKDSKTQKEFYLFETHMPLADNARKHACQMLVDAVSDKAKDNTPAFCTGDFNATPDAPE 222

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           +         +       A      L++F              RID I +          
Sbjct: 223 IAT-TICQSGILKDAYREAAVQHGALFTFPSKKT---------RIDFIFV--------KH 264

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263
           A + +     +  SDH P+++ ++I
Sbjct: 265 ATVLSTRTIVSSLSDHYPMVIVVEI 289


>gi|328767273|gb|EGF77323.1| hypothetical protein BATDEDRAFT_36021 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 1267

 Score = 43.2 bits (100), Expect = 0.036,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 8/44 (18%)

Query: 2   SVVTVA--TWNVNSIRARIHNLAAWI---KENNPD--IICLQET 38
           S + +   +WNVN  R    +L  W+   +  +PD  I+  QE 
Sbjct: 256 SKLKLCVGSWNVNG-RLASESLVPWLGSKEAEDPDMYILGFQEV 298


>gi|312194022|ref|YP_004014083.1| endonuclease/exonuclease/phosphatase [Frankia sp. EuI1c]
 gi|311225358|gb|ADP78213.1| Endonuclease/exonuclease/phosphatase [Frankia sp. EuI1c]
          Length = 324

 Score = 43.2 bits (100), Expect = 0.036,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 9/44 (20%)

Query: 221 IRIDHIMLSPEATSLLHSARIDTKPR-GWTKPSDHTPVIVSLDI 263
            R+DH+++SP+ T+        T  R G +  SDH P++  L +
Sbjct: 285 WRLDHVLISPQFTA--------TGLRVGKSYGSDHLPLVADLAL 320


>gi|225438271|ref|XP_002271965.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 2090

 Score = 43.2 bits (100), Expect = 0.036,   Method: Composition-based stats.
 Identities = 28/228 (12%), Positives = 56/228 (24%), Gaps = 28/228 (12%)

Query: 33   ICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQA 92
             CLQETK  + +                      GV              L         
Sbjct: 838  FCLQETKMTEMSL---------------------GVVRSLGVGRFLEWGALDARGAAGGV 876

Query: 93   RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG 152
                    +    L +G   +          +    S +        +    EE     G
Sbjct: 877  VVFWDNRVLELMGLEVGLFSISCRFKNVEDGFRWTFSGVYGPTLKRYREAFWEELGAIRG 936

Query: 153  DYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYA 212
             +         +N   + N+      V  S ++   +     +R        +++    +
Sbjct: 937  LWTDPWCIEGDFNMTRFSNERRRGGRVSSSMRRFSEVIDELELRDLPLQGGPFTW----S 992

Query: 213  DSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
               +     RID  ++S +            +       SDH P+++ 
Sbjct: 993  GGLNNQTMSRIDRFLVSEDWEGYFKGVV---QSTLSRPVSDHFPILLD 1037


>gi|188589668|ref|YP_001919752.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum E3 str. Alaska E43]
 gi|188499949|gb|ACD53085.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
           botulinum E3 str. Alaska E43]
          Length = 262

 Score = 43.2 bits (100), Expect = 0.037,   Method: Composition-based stats.
 Identities = 44/267 (16%), Positives = 86/267 (32%), Gaps = 12/267 (4%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYHI 57
           + + T N +S +      +I  LA  I E + D I LQE  ++ + N     L+  N+ +
Sbjct: 1   MKLLTLNCHSWQEENQIDKIKYLAKTIAEKDYDAIALQEVSQSINSNVIKSNLKYDNFAV 60

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
               +           +    I      + L +  +           +      Y     
Sbjct: 61  LLKSELDKYNTNYNFFWDFSHIGYEKYEEGLAIFTKHNIVDEKSFFISKATDVEYWKT-R 119

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
            I    ++     I  +        + EEP  +      + + +   N   +  D     
Sbjct: 120 RIVKLTFEYNNENIDIYSCHLGWWEDQEEPFKY--QVKKLLEENTSNNTTFFMGDFNNNA 177

Query: 178 EVRQ-SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
            +R   +  L N G  D    + +  +  +            + +R+D I+ + +   +L
Sbjct: 178 FIRNEGYDYLLNKGLIDTFTISKEADNGITVRGKIDGWDENKEKLRLDLILSNKKL-DVL 236

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263
            S  I          SDH  V VSL++
Sbjct: 237 TSKVIFNGI-NKDIISDHYGVEVSLNL 262


>gi|224013854|ref|XP_002296591.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220968943|gb|EED87287.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 625

 Score = 43.2 bits (100), Expect = 0.037,   Method: Composition-based stats.
 Identities = 19/140 (13%), Positives = 41/140 (29%), Gaps = 29/140 (20%)

Query: 6   VATWNVNSIRARIHN-----------------LAAWIKEN-NPDIICLQETKTEDKNF-- 45
           + +WNV  ++  ++                   A+++  + NP ++CLQE+K    +   
Sbjct: 22  IISWNVAGLKPALNKIASDYGNNDKNKNKPHPFASYLSHHSNPTLLCLQESKIPHSHLSS 81

Query: 46  ---PFETLQSLNYHIETCG-----QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA 97
              P        Y            + +NGV   +K   + +                  
Sbjct: 82  RSEPHFCSSIPGYESFWSCATAEKCRGFNGVVTYAKQGCV-VRADCNPLGSVELDSQGRC 140

Query: 98  TFTINTQTLRIGNLYLPHGN 117
             T + + +         G 
Sbjct: 141 VMTDHGRWVCFNVYVPCGGG 160



 Score = 41.3 bits (95), Expect = 0.15,   Method: Composition-based stats.
 Identities = 11/92 (11%), Positives = 27/92 (29%), Gaps = 3/92 (3%)

Query: 150 FAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL--QNMGFTDAIRATHDT-HHLYS 206
            +   ++        +   WE            + +   +  G  D  R  +      ++
Sbjct: 335 MSKIAHVTWDEGTLRSIAEWEGAGLNVDATPYLWGRGLLEEDGMVDVFRHLYPEAEGRFT 394

Query: 207 FWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
            W  + +    N+G RID   +  +    +  
Sbjct: 395 CWHQFMNKRYSNEGTRIDFTFVDSDLMRFVEK 426


>gi|312130303|ref|YP_003997643.1| endonuclease/exonuclease/phosphatase [Leadbetterella byssophila DSM
           17132]
 gi|311906849|gb|ADQ17290.1| Endonuclease/exonuclease/phosphatase [Leadbetterella byssophila DSM
           17132]
          Length = 363

 Score = 43.2 bits (100), Expect = 0.037,   Method: Composition-based stats.
 Identities = 31/250 (12%), Positives = 69/250 (27%), Gaps = 24/250 (9%)

Query: 19  HNLAAWIKENNPDIICLQETKTEDKNFPFETL----QSLNYHIETCGQKSYN---GVAIL 71
             +   +   N DI C QE   + KNF ++ +    +   Y++    Q+  +   G   L
Sbjct: 128 KGIGETVVGQNADIKCFQEFYNDSKNFDYDLIRRTAEKNPYYVYMHSQQGNDKGQGTIGL 187

Query: 72  SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWI 131
           + +    I+              +     +N  T+R+ N  L       +  +D  ++  
Sbjct: 188 ATFSIYPIIRKEEMYWPTNNNGLLSTDIVVNGDTIRVINFQLKSMGIRVNKVFDHGLNK- 246

Query: 132 KRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191
                     L   +         +                A    E+   +   +    
Sbjct: 247 ----VETKNILVQLKNGFSERGNEVNILESWINKSPYPVIIAGDLNELPYGYAYGKLRRL 302

Query: 192 TDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP 251
                        +++           + +RID+          +   +   +     K 
Sbjct: 303 LLNAFEEEGRGFGFTY-------RKILRFLRIDNQFF-EAEKFKIVRFKTLHEY----KY 350

Query: 252 SDHTPVIVSL 261
           SDH P++   
Sbjct: 351 SDHYPLLGEY 360


>gi|295681288|ref|YP_003609862.1| endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1002]
 gi|295441183|gb|ADG20351.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1002]
          Length = 290

 Score = 43.2 bits (100), Expect = 0.037,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 18/38 (47%), Gaps = 4/38 (10%)

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           D + ++ +  + + S  +D   R     SDH P+ + L
Sbjct: 256 DFVFVTQDLGTRIASCEVDPHSRS----SDHQPMWLEL 289


>gi|300773137|ref|ZP_07083006.1| endonuclease/exonuclease/phosphatase [Sphingobacterium spiritivorum
           ATCC 33861]
 gi|300759308|gb|EFK56135.1| endonuclease/exonuclease/phosphatase [Sphingobacterium spiritivorum
           ATCC 33861]
          Length = 645

 Score = 43.2 bits (100), Expect = 0.038,   Method: Composition-based stats.
 Identities = 45/285 (15%), Positives = 78/285 (27%), Gaps = 47/285 (16%)

Query: 2   SVVTVATWNVN--SI-------RARIHNLAAWIKENNPDIICLQE-TKTEDKNFPFETLQ 51
           ++V V  WN+    +       R+RI   A  I+    DII +QE    +D        Q
Sbjct: 374 NLVRVLQWNIWHGGVHLGKEAGRSRI---ADLIRNTKADIITMQEGYSAQDS-----IAQ 425

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
           +L +H++T      N   +          +     +             IN   LR    
Sbjct: 426 ALGFHLQT-KSSKDNLALLSRYPVESIKSSEPFKSNPAKIDLPNGKRILINDCWLRYAYR 484

Query: 112 YLPHGNPITSTKYDDKISWIKR-----------FLRFASQRLELEEPLIFAGDYN-IIPQ 159
                    +                                  + P+I AGD+N     
Sbjct: 485 PEYTCAYQNTGMDPRIWIAEDSALALTDIRNLIEKDIDPYIDSPDMPVIIAGDFNSCSHM 544

Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK 219
                   +      +        + +   GF+D+ R  +          +   +++   
Sbjct: 545 DWTERTRSLHYG---YGPVDFPVSKFMYEQGFSDSFRELNPDEL-----THQGGTFAPIY 596

Query: 220 G----IRIDHIMLSPEATSLLHSARIDTKPRGWT--KPSDHTPVI 258
           G     RID I           S++I            SDH  V+
Sbjct: 597 GQLQNARIDFIYYKGGI--KAISSKIVRTSPDIDDIWASDHAAVL 639


>gi|254459775|ref|ZP_05073191.1| endonuclease/exonuclease/phosphatase [Rhodobacterales bacterium
           HTCC2083]
 gi|206676364|gb|EDZ40851.1| endonuclease/exonuclease/phosphatase [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 329

 Score = 43.2 bits (100), Expect = 0.038,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 20/52 (38%), Gaps = 12/52 (23%)

Query: 223 IDHIMLSPEATSLLH-----------SARIDTKPRG-WTKPSDHTPVIVSLD 262
           +D+IM+S +                    +D K R      SDH PV + LD
Sbjct: 277 LDYIMVSDDLRYKAKTWRIWHPFDDPECWVDLKLRDALLTASDHFPVTLDLD 328


>gi|261404204|ref|YP_003240445.1| 5'-Nucleotidase domain-containing protein [Paenibacillus sp.
            Y412MC10]
 gi|261280667|gb|ACX62638.1| 5'-Nucleotidase domain protein [Paenibacillus sp. Y412MC10]
          Length = 2084

 Score = 43.2 bits (100), Expect = 0.038,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 30/81 (37%), Gaps = 16/81 (19%)

Query: 200  DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP------SD 253
                 Y++  Y  +S        +DHI++S   T    S ++D        P      SD
Sbjct: 1075 PLKEQYTY-TYDGNSQV------LDHILVSKNLT---RSTQVDIVHLNADFPASKGRVSD 1124

Query: 254  HTPVIVSLDIPEPRKKQQDST 274
            H PV+  +D+ E        T
Sbjct: 1125 HDPVVAQIDLKEEAVDGFPLT 1145


>gi|149689206|gb|ABR27973.1| salivary inositol polyphosphate 5-phosphatase [Triatoma infestans]
          Length = 318

 Score = 43.2 bits (100), Expect = 0.038,   Method: Composition-based stats.
 Identities = 45/307 (14%), Positives = 84/307 (27%), Gaps = 70/307 (22%)

Query: 6   VATWNVN------SIRARIHNLAAWIKENNPDI--ICLQETKTED--------------K 43
           V TWNV       S++  +  ++    E NPDI  I LQE                    
Sbjct: 31  VVTWNVAEKDPPGSVKELLGQVSDS-SEVNPDIVIIGLQELTMNPVQAVVNNIFKDKWSD 89

Query: 44  NFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDD--------LDVQARFI 95
           +F        NYH           +  + K +  + +               +      +
Sbjct: 90  DFNEILKSRNNYHKVYSESLLGILLKGIVKIKYKDSINKKADATTVKTGLGGMSGNKGAV 149

Query: 96  EATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYN 155
              F +N +   I N +L   +       +    +     +      +  + + + GD N
Sbjct: 150 ILKFQLNNRWFCIVNSHLAAHDEKL---QERIEDYKTINNKRVDFCNKPSDFIFWLGDLN 206

Query: 156 IIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY---------- 205
              Q       I          ++ +  Q   N    +     ++    +          
Sbjct: 207 FRLQEDVEDEKIRNWVQQRKYADLLKLDQLKINKQTKEIFTDFNEKEITFAPTFKLEKGT 266

Query: 206 -SFWDYYADSWSKNKGIRIDHIM--------LSPEATSLLHSARIDTKPRGWTKPSDHTP 256
            ++      +W+       D I+        ++P     + S           K SDH P
Sbjct: 267 GTYSTKRRPAWT-------DRILYKSDTKKNITPTLYKSIESY----------KHSDHYP 309

Query: 257 VIVSLDI 263
           V    DI
Sbjct: 310 VQAQFDI 316


>gi|281352255|gb|EFB27839.1| hypothetical protein PANDA_007669 [Ailuropoda melanoleuca]
          Length = 113

 Score = 43.2 bits (100), Expect = 0.039,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 36/110 (32%), Gaps = 12/110 (10%)

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
                 E R     L  M      R  H     YSF+     ++S     R+DHI+    
Sbjct: 1   KQKINKETRALNVILDQMDLIGIYRTLHSRTTEYSFFSNAHGTFS-----RVDHILGQKT 55

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
             +      +          SDH  + + L+     K  ++S +  ++ I
Sbjct: 56  GLNRYQKTEVIPCI-----FSDHNALKLELN--HKEKSGRNSNTWKVRTI 98


>gi|126650018|ref|ZP_01722251.1| endonuclease/exonuclease/phosphatase family protein [Bacillus sp.
            B14905]
 gi|126593190|gb|EAZ87152.1| endonuclease/exonuclease/phosphatase family protein [Bacillus sp.
            B14905]
          Length = 1275

 Score = 43.2 bits (100), Expect = 0.040,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 31/73 (42%), Gaps = 10/73 (13%)

Query: 200  DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT---KPSDHTP 256
                 ++++      +  N  + +DHI++S    ++     I           + SDH P
Sbjct: 1095 PETDRFTYF------FQGNNQV-LDHILVSNNLANVTAIDLIHINANFTEAQGRASDHDP 1147

Query: 257  VIVSLDIPEPRKK 269
            V+V +D+   +++
Sbjct: 1148 VLVQIDLKAGKEE 1160


>gi|330806705|ref|YP_004351167.1| Putative endonuclease/exonuclease/phosphatase [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|253559456|gb|ACT32417.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           fluorescens]
 gi|327374813|gb|AEA66163.1| Putative endonuclease/exonuclease/phosphatase [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 292

 Score = 43.2 bits (100), Expect = 0.040,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 14/59 (23%)

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
           +F  +            +DHI+LSP  T  L    +  +P      SDH PV V + +P
Sbjct: 228 TFPSWRPQ-------RCLDHILLSPTLT--LERVEVLAQP-----ISDHLPVAVEIRLP 272


>gi|163860141|gb|ABY41236.1| probable endonuclease/exonuclease/phosphatase family protein
           [Pseudomonas fluorescens]
          Length = 292

 Score = 43.2 bits (100), Expect = 0.040,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 14/59 (23%)

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
           +F  +            +DHI+LSP  T  L    +  +P      SDH PV V + +P
Sbjct: 228 TFPSWRPQ-------RCLDHILLSPTLT--LERVEVLAQP-----ISDHLPVAVEIRLP 272


>gi|311063871|ref|YP_003970596.1| hypothetical protein BBPR_0452 [Bifidobacterium bifidum PRL2010]
 gi|310866190|gb|ADP35559.1| Conserved hypothetical membrane spanning protein with
           Endonuclease/Exonuclease/phosphatase family domain
           [Bifidobacterium bifidum PRL2010]
          Length = 371

 Score = 43.2 bits (100), Expect = 0.041,   Method: Composition-based stats.
 Identities = 38/264 (14%), Positives = 69/264 (26%), Gaps = 51/264 (19%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTED--KNFPFETLQSLNYHIETCGQ 62
            V T+NV    A    +   +++   +++ LQET T D  K      + S   + +    
Sbjct: 149 RVMTFNVYKGHADAKAIVDIVRDQRVEVLALQET-TNDFVKKLDEAGIHSYLPYSQVSSS 207

Query: 63  KSYNGVAILSKYQPIEIVTHLPGD--DLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
               G  I S  +    V    G                    + + +       G    
Sbjct: 208 DGVYGNGIWSATELGRPVDDEVGSSASFMPGGTVTFGGGKAQLRFVSVHTTAPIPG---- 263

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
                    W +     AS R       +F GD+N         N +             
Sbjct: 264 -----YWSRWKRSLDELASMRSHEGSRYVFMGDFNATTDHTPFRNILGN----------- 307

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS---LLH 237
                                   +++         +  G  IDHI+L  +  +    + 
Sbjct: 308 ----------RFSDAARQSGHGFTFTWPSNKLPL-PRFAG--IDHIVLDKDIIAGQMQVK 354

Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261
           S             SDH  ++ ++
Sbjct: 355 SV----------AGSDHAALLATI 368


>gi|282880129|ref|ZP_06288849.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           timonensis CRIS 5C-B1]
 gi|281306002|gb|EFA98042.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           timonensis CRIS 5C-B1]
          Length = 311

 Score = 43.2 bits (100), Expect = 0.041,   Method: Composition-based stats.
 Identities = 38/292 (13%), Positives = 71/292 (24%), Gaps = 50/292 (17%)

Query: 6   VATWNV-----------NSIRARIHNLAAWIKENNPDIICLQE-TKTEDKNFPFETLQSL 53
           VAT+N+           N    R   +  ++    PDI   QE  K + ++      Q  
Sbjct: 24  VATYNLRYDNEDDRQEGNGWTKRCQVICDFLNFEQPDIFGTQEGLKHQLEDLKRGLDQ-- 81

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
            Y     G++        S     +                 E               + 
Sbjct: 82  -YDYIGIGREDGKEQGEHSAIFYKKDKLKCFDKGNFWLNETPEKPVLGWDAACVRICTWG 140

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
              +  T+  +      +      A +                        +  + ++D 
Sbjct: 141 KFRDWKTNLTFYFFNLHMDHVGVVARREAAKLVIKKIKEIAGNNAPVILTGDFNVDQHDE 200

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
            + +       K   +                S     ++S       RIDHI +S +  
Sbjct: 201 IYKIFSESGILKDSYVAAKHRFAENGTFQDFDS--SMKSES-------RIDHIFVSNKFE 251

Query: 234 SLLHSARIDTKPR--GWTK----------------------PSDHTPVIVSL 261
             +++  I T        K                      PSDH PV+  +
Sbjct: 252 --VNNYAIHTDAYWTANEKMPKLKSGNAPKELEFQQYTHRLPSDHYPVLAKI 301


>gi|270016726|gb|EFA13172.1| hypothetical protein TcasGA2_TC001813 [Tribolium castaneum]
          Length = 970

 Score = 43.2 bits (100), Expect = 0.041,   Method: Composition-based stats.
 Identities = 38/260 (14%), Positives = 69/260 (26%), Gaps = 49/260 (18%)

Query: 13  SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILS 72
           S++ +I  L A++  NN DI+ + ETK      P +     NY+I    +      A   
Sbjct: 351 SVKQKIDELIAFLHSNNVDILAISETKLT----PNDRFYIQNYNIIRQDRVDGTNAAGGV 406

Query: 73  KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIK 132
                + ++             +          + I N    + +       +       
Sbjct: 407 AILVKKGISFSKLTLPRTTIEAVGIKLANQIHFIAIYNRPCYNISQRDLENLN------- 459

Query: 133 RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192
                      +   +I AGD+N       C+      N                     
Sbjct: 460 ----------NIGNKVIIAGDFNATHNTWGCHRNNTSGNTIYNLSISNNIIINHPRSPTH 509

Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPS 252
                +  T                     ID I+              D +       S
Sbjct: 510 FPSNNSTPTV--------------------IDLILTKNFLLEN------DPQSLSQLN-S 542

Query: 253 DHTPVIVSL-DIPEPRKKQQ 271
           DH PVI  + ++P+ +  +Q
Sbjct: 543 DHNPVIFEISNLPKDKDNRQ 562


>gi|227537026|ref|ZP_03967075.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
           33300]
 gi|227243118|gb|EEI93133.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
           33300]
          Length = 674

 Score = 43.2 bits (100), Expect = 0.041,   Method: Composition-based stats.
 Identities = 43/285 (15%), Positives = 77/285 (27%), Gaps = 47/285 (16%)

Query: 2   SVVTVATWNVN--SI-------RARIHNLAAWIKENNPDIICLQE-TKTEDKNFPFETLQ 51
           ++V V  WN+    +       R+RI      I+    DII +QE    +D        Q
Sbjct: 403 NLVRVLQWNIWHGGVHLGKEAGRSRI---TDLIRSAKADIITMQEGYSAQDS-----IAQ 454

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
           +L +H++T      N   +          +     +             +N   LR    
Sbjct: 455 ALGFHLQT-KSSKDNLALLSRYPVESIKSSEPFKSNPAKIDLPNGKRILVNDCWLRYAYR 513

Query: 112 YLPHGNPITSTKYDDKISWIKR-----------FLRFASQRLELEEPLIFAGDYN-IIPQ 159
                    +                                  + P+I AGD+N     
Sbjct: 514 PEYTCAYQNTGMDPQTWIAEDAVLALTDIRNLMEKDVNPYIESPDMPVIIAGDFNSCSHL 573

Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK 219
                   +      +      + + +   GF D+ R  +          +   +++   
Sbjct: 574 DWTERTRSLHYG---YGPVAFPTSKFMYEQGFKDSFREMNPDEL-----THQGGTFAPIY 625

Query: 220 G----IRIDHIMLSPEATSLLHSARIDTKPRGWT--KPSDHTPVI 258
           G     RID I           S++I            SDH  V+
Sbjct: 626 GQLQNARIDFIYYKGGI--KAISSKIVRTSPDIDDVWASDHAAVL 668


>gi|167823858|ref|ZP_02455329.1| endonuclease/exonuclease/phosphatase family superfamily protein
           [Burkholderia pseudomallei 9]
          Length = 125

 Score = 43.2 bits (100), Expect = 0.041,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 4/38 (10%)

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           D   ++      L    ID    G  + SDH P+++ L
Sbjct: 89  DFAFVTDTLVRRLSRCEID----GTVRASDHQPIVLEL 122


>gi|257125417|ref|YP_003163531.1| endonuclease/exonuclease/phosphatase [Leptotrichia buccalis
           C-1013-b]
 gi|257049356|gb|ACV38540.1| Endonuclease/exonuclease/phosphatase [Leptotrichia buccalis
           C-1013-b]
          Length = 248

 Score = 43.2 bits (100), Expect = 0.042,   Method: Composition-based stats.
 Identities = 33/259 (12%), Positives = 73/259 (28%), Gaps = 43/259 (16%)

Query: 15  RARIH--NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN-YHIETCGQKSYNGVAIL 71
           R+  H   +  +I +  PDI+ L E               L  + + +  Q +  G    
Sbjct: 29  RSVRHIYRIGKFINKYKPDIVGLVEV-------------DLGSFRMYSRNQATLLGRITR 75

Query: 72  SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWI 131
           +                    R            LR    YL  G      + + +   +
Sbjct: 76  NNNVYQYKYEEDSNYMKFPMVRKQGNALLSKKPVLREEFHYLDIGMKKLIIEVETEDVVV 135

Query: 132 KRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY-NPIIWENDACFTLEVRQSFQKLQNMG 190
                    +   ++ +          +P     +  ++  +    + ++ S  +  N+ 
Sbjct: 136 FLVHLALGGKTRQKQIVQLYNFVKNCKKPVIVAGDFNVFWGEEEIEMFLQASNLRNINIR 195

Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
                 + +                       +D I+ S E    + S  +       T+
Sbjct: 196 KDPTFPSWNPKRE-------------------LDFILCSKEI--KVKSYEVI-----QTQ 229

Query: 251 PSDHTPVIVSLDIPEPRKK 269
            SDH P++V  +I +  K+
Sbjct: 230 LSDHLPILVDFEIVKSEKR 248


>gi|319784539|ref|YP_004144015.1| endonuclease/exonuclease/phosphatase [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317170427|gb|ADV13965.1| Endonuclease/exonuclease/phosphatase [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 348

 Score = 43.2 bits (100), Expect = 0.042,   Method: Composition-based stats.
 Identities = 41/257 (15%), Positives = 67/257 (26%), Gaps = 46/257 (17%)

Query: 19  HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIE 78
             + + I   NPD+I L E              +  Y I         GVA+LS+     
Sbjct: 122 KKVLSLIGRTNPDVITLDEVSAMWATELGYISSAYPYRILCPYPNKIFGVALLSRRPFAA 181

Query: 79  IVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFA 138
                 G +   + R   AT T++   + +    +          +        +     
Sbjct: 182 ------GTEARCERRGAMATATVDFGGIDVDVAAIHLS-------WPWPREQYWQIGELT 228

Query: 139 SQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT 198
                L E  I AGD N  P                                        
Sbjct: 229 EPLSALGETAIMAGDCNAAPWSAAVRRVAALGGLTVMPSAGP------------------ 270

Query: 199 HDTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257
                  ++       +  +  G+ ID +  S           I +  R     SDH PV
Sbjct: 271 -------TWIHIRLPDFLRRFAGLPIDQVF-SKG------GVTIHSATRLEDTGSDHLPV 316

Query: 258 IVSLDIPEPRKKQQDST 274
           +V   +   ++K  D  
Sbjct: 317 MVEFSLRLNQQKPLDEH 333


>gi|2129709|pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW15) -
           Arabidopsis thaliana retrotransposon Ta11-1
 gi|976278|gb|AAA75254.1| reverse transcriptase [Arabidopsis thaliana]
          Length = 1333

 Score = 43.2 bits (100), Expect = 0.042,   Method: Composition-based stats.
 Identities = 35/262 (13%), Positives = 72/262 (27%), Gaps = 35/262 (13%)

Query: 4   VTVATWNVNSIR----ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           +++ +WN   +       I  L      + P+++ L ETK    N   +  + L Y    
Sbjct: 1   MSLVSWNCQGLGWSQDLTIPRLMEMRLSHFPEVLFLMETK-NCSNVVVDLQEWLGYERVF 59

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
                      LS    +     +           I+      +    +  +Y       
Sbjct: 60  TVNP-----IGLSGGLALFWKKGVDIVIKYADKNLIDFQIQFGSHEFYVSCVYGNPAFSD 114

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
               ++          +     +  +EP    GD+N I   +          D+ F    
Sbjct: 115 KHLVWE----------KITRIGINRKEPWCMLGDFNPILH-NGEKRGGPRRGDSSFLPFT 163

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
                          +       + +++     + W +    R+D    +          
Sbjct: 164 DMLDSC--------DMLELPSIGNPFTWGGKTNEMWIQ---SRLDRCFGNKN---WFRFF 209

Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261
            I  +     + SDH PV+V L
Sbjct: 210 PISNQEFLDKRGSDHRPVLVRL 231


>gi|86142990|ref|ZP_01061412.1| Endonuclease/exonuclease/phosphatase [Leeuwenhoekiella blandensis
           MED217]
 gi|85830435|gb|EAQ48894.1| Endonuclease/exonuclease/phosphatase [Leeuwenhoekiella blandensis
           MED217]
          Length = 362

 Score = 43.2 bits (100), Expect = 0.042,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 21/54 (38%), Gaps = 7/54 (12%)

Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDST 274
             +DHI +S    +      +    RG    SDH P    L +   +K +Q  +
Sbjct: 288 WPLDHIFVSEHFRAK----EVL---RGNDVGSDHFPAYAELTLESDKKDEQTPS 334


>gi|323356483|ref|YP_004222879.1| metal-dependent hydrolase [Microbacterium testaceum StLB037]
 gi|323272854|dbj|BAJ72999.1| metal-dependent hydrolase [Microbacterium testaceum StLB037]
          Length = 278

 Score = 43.2 bits (100), Expect = 0.042,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 2/50 (4%)

Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQ 270
            RID ++ +P+    + +  ID +P G   PSDH PV   + I      +
Sbjct: 231 RRIDALLATPDVG--VRAVGIDPRPTGTQWPSDHLPVQAVVRIHPGSDAR 278


>gi|319650796|ref|ZP_08004935.1| hypothetical protein HMPREF1013_01541 [Bacillus sp. 2_A_57_CT2]
 gi|317397653|gb|EFV78352.1| hypothetical protein HMPREF1013_01541 [Bacillus sp. 2_A_57_CT2]
          Length = 926

 Score = 43.2 bits (100), Expect = 0.043,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 29/75 (38%), Gaps = 12/75 (16%)

Query: 202 HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGW----TKPSDHTPV 257
              Y++ +Y  ++        +DHI++S           I     G+     + SDH PV
Sbjct: 734 EERYTY-NYQGNAQV------LDHILVSNNLAKK-TEVDILHINSGFMEEHGRASDHDPV 785

Query: 258 IVSLDIPEPRKKQQD 272
           ++   +    K ++ 
Sbjct: 786 MIQTSLKPSVKPEEP 800


>gi|309800613|ref|ZP_07694757.1| exodeoxyribonuclease III [Streptococcus infantis SK1302]
 gi|308115759|gb|EFO53291.1| exodeoxyribonuclease III [Streptococcus infantis SK1302]
          Length = 269

 Score = 43.2 bits (100), Expect = 0.043,   Method: Composition-based stats.
 Identities = 35/274 (12%), Positives = 82/274 (29%), Gaps = 22/274 (8%)

Query: 4   VTVATWNVNSIRARIHN--------LAAWIKENNPDIICLQE-----TKTEDKNFPF--E 48
           +   T N +S    +          L   I EN+ D+IC QE     T  + +  P    
Sbjct: 1   MKFLTLNTHS---WMEKNPEQKFQLLLQDILENSYDLICFQEINQEITSAQVETAPLYQP 57

Query: 49  TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108
              +   H +   +     +A   +        +  G D   +   I +   I  + + +
Sbjct: 58  LPSAEPIHQDHYVRLLVEKLAEHGQNYYWTWAYNHIGYDRYHEGVAILSKTPIEAREILV 117

Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG-DYNIIPQPHDCYNPI 167
            ++  P           + +   K     +      ++        +  + +  +    +
Sbjct: 118 SDVDDPTDYHTRRVALAETVVEGKELAVASVHLSWWDKGFQEEWARFEAVLKELNKSLLL 177

Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227
             + +     E  Q+      +   DA     +    Y+           ++ +RID+I 
Sbjct: 178 AGDFNNPAGQEGYQAILASP-LDLQDAYEVAKERSGSYTVPPEIDGWKGNSEPLRIDYIF 236

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
            + +    +    +    +   + SDH  +   L
Sbjct: 237 TTKDV--QVEKLHVVFDGKNSPQVSDHYGLQAEL 268


>gi|307330479|ref|ZP_07609622.1| Endonuclease/exonuclease/phosphatase [Streptomyces violaceusniger
          Tu 4113]
 gi|306883904|gb|EFN14947.1| Endonuclease/exonuclease/phosphatase [Streptomyces violaceusniger
          Tu 4113]
          Length = 279

 Score = 43.2 bits (100), Expect = 0.043,   Method: Composition-based stats.
 Identities = 14/36 (38%), Positives = 23/36 (63%)

Query: 2  SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQE 37
          +VV V ++N+ S+R     LA  I+   PD++C+QE
Sbjct: 16 AVVRVLSYNIRSMRDDREALARVIRACTPDVVCVQE 51


>gi|294941672|ref|XP_002783182.1| carbon catabolite repressor protein, putative [Perkinsus marinus
           ATCC 50983]
 gi|239895597|gb|EER14978.1| carbon catabolite repressor protein, putative [Perkinsus marinus
           ATCC 50983]
          Length = 320

 Score = 43.2 bits (100), Expect = 0.043,   Method: Composition-based stats.
 Identities = 42/289 (14%), Positives = 82/289 (28%), Gaps = 55/289 (19%)

Query: 9   WNVNSIRARIHNLAAWIKENNPDIICLQETKTED--KNFPFETLQSLNYHIETCGQKSYN 66
           WN+     R+  L     E++ DI+CL E    D  ++F        + +         +
Sbjct: 56  WNM-----RLPMLVKTCLESSADILCLCE---MDSYEDFRQALGSYYDGYFAPRAGGRDD 107

Query: 67  GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDD 126
           G AI  +   +++++           R        N        +        +      
Sbjct: 108 GSAIFWRRSILKLMSAKTLHYTGGSERVAAICRLQNLYGQTFTVVGTHLYWKGSCPTQSH 167

Query: 127 KISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL 186
           +   +          L+ +EP+I  GD N   +  D +  I                 + 
Sbjct: 168 E---VDELTTELRAILDRDEPVILCGDLN-NHRDSDTFMRIRDCGMEDCFTAAGLKPPRY 223

Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR--IDHIML---SPEATSLLHSAR- 240
            ++     +                + S+    G    ID+I +   S + T  +  A  
Sbjct: 224 TSLVPPSYVL------------SSRSGSYRLLPGREDEIDYIFVGGQSSDLTFKVVDAVA 271

Query: 241 ID-----------------------TKPRGWTKPSDHTPVIVSLDIPEP 266
           ID                             +  SDH PV+  +++  P
Sbjct: 272 IDSCNDETGNGVVTGADSRDSSVAERGIPNMSHASDHLPVMCEVELTGP 320


>gi|225864161|ref|YP_002749539.1| putative secreted protein [Bacillus cereus 03BB102]
 gi|225789553|gb|ACO29770.1| putative secreted protein [Bacillus cereus 03BB102]
          Length = 264

 Score = 43.2 bits (100), Expect = 0.043,   Method: Composition-based stats.
 Identities = 40/278 (14%), Positives = 77/278 (27%), Gaps = 35/278 (12%)

Query: 3   VVTVATWNV-N--SI-RARIHNLAAWIKENNPDIICLQETKT-----EDKNFPFETLQSL 53
           ++ +AT+N+ N  S+   R+  +   I+  +P I+ LQE ++       KN        +
Sbjct: 7   ILRIATFNIWNHESLWFERLEAICEEIRSISPHILALQEVRSSVNLNSKKNVAQYIAGQI 66

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
            Y      +   +    L+    I I      ++   +    E+ +     T        
Sbjct: 67  GYPFCIFKEYPDSPDEGLAFLSKIPI----IAEEAIWETDIEESNYCAIRITFTYKGCKF 122

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
              N   + K           +    +    +  L+     +        Y       D 
Sbjct: 123 GVTNVHLNWKSSRIRQEQMNTVNNWIENRASDYELLCGDFNDDPFSMVHQYLIRKHWIDV 182

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
               E+ ++      + +        D                     R D IM+     
Sbjct: 183 AQFKEIEENMIAQPTLDYRKNPNLKDDVKQE----------------KRYDWIMIQENTA 226

Query: 234 ---SLLHSARIDTK---PRGWTKPSDHTPVIVSLDIPE 265
                + +  I  +         PSDH  V V L   E
Sbjct: 227 FEFPTIENVSIFGESALTSTGMFPSDHYGVFVDLKFNE 264


>gi|167738257|ref|ZP_02411031.1| endonuclease/exonuclease/phosphatase family superfamily protein
           [Burkholderia pseudomallei 14]
          Length = 115

 Score = 43.2 bits (100), Expect = 0.043,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 4/38 (10%)

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           D   ++      L    ID    G  + SDH P+++ L
Sbjct: 79  DFAFVTDTLVRRLSRCEID----GTVRASDHQPIVLEL 112


>gi|147778443|emb|CAN63032.1| hypothetical protein VITISV_024672 [Vitis vinifera]
          Length = 1413

 Score = 43.2 bits (100), Expect = 0.043,   Method: Composition-based stats.
 Identities = 31/244 (12%), Positives = 63/244 (25%), Gaps = 29/244 (11%)

Query: 18  IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPI 77
           +  L   ++E  P++I L ET         E    LNY                S     
Sbjct: 358 VRLLTNLVREKKPEVIFLIETFCTSARI-SEIANKLNYE--------------GSYGVNC 402

Query: 78  EIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF 137
              +   G     + +              +                 ++      +   
Sbjct: 403 RGHSAGLGLIWRCKDKVTILGSHDRYIDAIVTLENQRMFRLTGFYGLANRSQRSSSWEIL 462

Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA 197
            +       P    GD+N +    +                   +   L ++G+      
Sbjct: 463 RNLHAAHSLPWCVIGDFNELMHQSEKCGNHPHPGSLIEAFRQVVTNCGLSDLGYVGY--- 519

Query: 198 THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257
                  Y++        ++    R+D  ++S +   L H +        +   SDH PV
Sbjct: 520 ------AYTW--ERGRGTTRWVEERLDRALVSADWKHLFHQS---RLIHLFVSTSDHLPV 568

Query: 258 IVSL 261
           ++ L
Sbjct: 569 LLEL 572


>gi|325117381|emb|CBZ52933.1| Carbon catabolite repressor protein, related [Neospora caninum
            Liverpool]
          Length = 1483

 Score = 43.2 bits (100), Expect = 0.043,   Method: Composition-based stats.
 Identities = 15/91 (16%), Positives = 23/91 (25%), Gaps = 2/91 (2%)

Query: 17   RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQP 76
            R   +   I  +NPD++CLQE   + ++F    L  L  H      K        S    
Sbjct: 1004 RRQRILDEILTHNPDVVCLQEV--QSEHFEDFFLPELARHGYNGMYKQKTMEIFTSGSGK 1061

Query: 77   IEIVTHLPGDDLDVQARFIEATFTINTQTLR 107
                            +              
Sbjct: 1062 KSGGKFTMDGCATFYRKSKFTIVDQCGLEFS 1092


>gi|167918661|ref|ZP_02505752.1| endonuclease/exonuclease/phosphatase family superfamily protein
           [Burkholderia pseudomallei BCC215]
          Length = 114

 Score = 43.2 bits (100), Expect = 0.043,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 4/38 (10%)

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           D   ++      L    ID    G  + SDH P+++ L
Sbjct: 78  DFAFVTDTLVRRLSRCEID----GTVRASDHQPIVLEL 111


>gi|159028952|emb|CAO87413.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 1628

 Score = 43.2 bits (100), Expect = 0.043,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 24/46 (52%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268
           +DHI+++    S      +        +P+DH P++ +L++P+  +
Sbjct: 729 LDHILITNNLASKAEYDIVRVNVDFLDQPADHEPILATLNLPQQSQ 774


>gi|152964513|ref|YP_001360297.1| endonuclease/exonuclease/phosphatase [Kineococcus radiotolerans
           SRS30216]
 gi|151359030|gb|ABS02033.1| Endonuclease/exonuclease/phosphatase [Kineococcus radiotolerans
           SRS30216]
          Length = 344

 Score = 43.2 bits (100), Expect = 0.043,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 21/56 (37%), Gaps = 3/56 (5%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFE-TLQSLNYHIE 58
           + VAT+N  + R     L   ++   PD++ LQE     +   +        Y   
Sbjct: 105 LRVATFNTTNWRGA-EGLEDLLRRGRPDVVALQEV-VPSQQRDYAGVFPEYPYRSY 158


>gi|213964132|ref|ZP_03392371.1| endonuclease/exonuclease/phosphatase family protein [Capnocytophaga
           sputigena Capno]
 gi|213953225|gb|EEB64568.1| endonuclease/exonuclease/phosphatase family protein [Capnocytophaga
           sputigena Capno]
          Length = 253

 Score = 43.2 bits (100), Expect = 0.044,   Method: Composition-based stats.
 Identities = 42/272 (15%), Positives = 72/272 (26%), Gaps = 32/272 (11%)

Query: 3   VVTVATWNVNSIRARIHN--------LAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           +  +ATWNV     R           +   I+E N D++ L E      +     L   +
Sbjct: 1   MYKIATWNV----ERPKKGTQKTALAIVK-IEELNADVLVLTE---NATSISLTELYPFS 52

Query: 55  YHI-ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
            H          + V+I SK+Q  E +                        T+   +   
Sbjct: 53  VHSLSYERTPEEHWVSIFSKWQITEQIQTFDNYRTACAVIKSPFGDITVFGTIIPYHQAG 112

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
             G    +  Y       K   + A      +   I     N +    D           
Sbjct: 113 VSGIKYGNLGYKQWEYHEKDLHQQAK-----DWERITKKTQNPLWVMGDFNQSRYNHQGY 167

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
                 +        +   +    T      +   D   +    N    IDHI +S    
Sbjct: 168 GTEKVRQLLSDY---LKKLNLTCVTEGDLSPFLHPDPIKNKIRNN----IDHICISNSFM 220

Query: 234 SLLHSARI---DTKPRGWTKPSDHTPVIVSLD 262
             + + ++   D         SDH  V +S +
Sbjct: 221 LKMKAYQVGAWDHFNEEGKYMSDHNGVFISFE 252


>gi|167533155|ref|XP_001748258.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163773378|gb|EDQ87019.1| predicted protein [Monosiga brevicollis MX1]
          Length = 372

 Score = 43.2 bits (100), Expect = 0.044,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 15/44 (34%), Gaps = 6/44 (13%)

Query: 222 RIDHIMLSPEATS--LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           RID+I  +          +  ID         SDH PVI     
Sbjct: 331 RIDYIYTNRAWEDHLRCTNCIIDR----GNVSSDHKPVIADFAW 370


>gi|89071355|ref|ZP_01158492.1| endonuclease/exonuclease/phosphatase family protein [Oceanicola
          granulosus HTCC2516]
 gi|89043144|gb|EAR49387.1| endonuclease/exonuclease/phosphatase family protein [Oceanicola
          granulosus HTCC2516]
          Length = 232

 Score = 43.2 bits (100), Expect = 0.044,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 21/44 (47%), Gaps = 11/44 (25%)

Query: 3  VVTVATWNVNSIRARI--------HNLAAWIKENNPDIICLQET 38
           + +A++N   IR  +        H +   +++ + D++ LQE 
Sbjct: 2  TLRLASYN---IRKCLGTDRRRDPHRILQVLRQADADVVALQEV 42


>gi|242033909|ref|XP_002464349.1| hypothetical protein SORBIDRAFT_01g016750 [Sorghum bicolor]
 gi|241918203|gb|EER91347.1| hypothetical protein SORBIDRAFT_01g016750 [Sorghum bicolor]
          Length = 384

 Score = 43.2 bits (100), Expect = 0.044,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 7/43 (16%)

Query: 2   SVVTVATWNVNS------IRARIHNLAAWIKENNPDIICLQET 38
             V + T+NV        IR R++ +   I+ ++PD+IC QE 
Sbjct: 114 KTVKIMTYNVWFREELELIR-RMNAIGDLIQHHSPDLICFQEV 155


>gi|242826100|ref|XP_002488573.1| hypothetical protein TSTA_109970 [Talaromyces stipitatus ATCC
           10500]
 gi|218712391|gb|EED11817.1| hypothetical protein TSTA_109970 [Talaromyces stipitatus ATCC
           10500]
          Length = 231

 Score = 43.2 bits (100), Expect = 0.044,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 16/44 (36%), Gaps = 4/44 (9%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEP 266
           ID ++ S      +    I     G    SDH  +    D+P P
Sbjct: 72  IDLVLASENLIDSMVKCAIH----GTEHGSDHRAIKTVFDVPRP 111


>gi|254883467|ref|ZP_05256177.1| metallophosphoesterase [Bacteroides sp. 4_3_47FAA]
 gi|319641746|ref|ZP_07996428.1| metallophosphoesterase [Bacteroides sp. 3_1_40A]
 gi|254836260|gb|EET16569.1| metallophosphoesterase [Bacteroides sp. 4_3_47FAA]
 gi|317386633|gb|EFV67530.1| metallophosphoesterase [Bacteroides sp. 3_1_40A]
          Length = 251

 Score = 43.2 bits (100), Expect = 0.045,   Method: Composition-based stats.
 Identities = 41/267 (15%), Positives = 75/267 (28%), Gaps = 61/267 (22%)

Query: 4   VTVATWNV-NSI----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL----N 54
           + + ++N+ N I    +     +A  I + NPD++ LQE  +     P   L+ +     
Sbjct: 31  LRIMSYNIHNGIGMDGKVDYARIANVISDVNPDVVALQELDSITHRSPVNVLEEIASVTG 90

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
            +       SY G          E   ++    L  +            + + +   +  
Sbjct: 91  MNYVFGPAISYGGGKYGIGVMSKEKPLNVRNVSLPGREEARTLLVVEFEKYIFLATHFSL 150

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
                           IK       +    E+P+  AGD N +P      N   +     
Sbjct: 151 TA-----------ADQIKSIEVILKEVFSKEKPVFMAGDMNSVPSSLTQKNIRKYFK--- 196

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI-DHIMLSPEAT 233
                      L +  +        D  + Y   +     ++  +  RI DH+       
Sbjct: 197 ----------VLTDDRWITCNGECIDYIYGY---EKKKGKFAVRRKGRIEDHV------- 236

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVS 260
                             SDH PV V 
Sbjct: 237 -----------------ASDHCPVYVD 246


>gi|327273914|ref|XP_003221724.1| PREDICTED: nocturnin-like [Anolis carolinensis]
          Length = 375

 Score = 43.2 bits (100), Expect = 0.045,   Method: Composition-based stats.
 Identities = 35/260 (13%), Positives = 61/260 (23%), Gaps = 20/260 (7%)

Query: 21  LAAWIKENNPDIICLQETKTEDKNFPFE--TLQSLNYHIET--CGQKSYNGVAILSKYQP 76
           +   I    PDI+CLQE    D  F      L  + Y              V   +    
Sbjct: 123 ILEEILAYQPDILCLQEV---DHYFDTFQPLLSRMGYQCTFLPKPWSPCLDVECNNGPDG 179

Query: 77  IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
             +        L            + T  + I  +   +                +    
Sbjct: 180 CALFFLKDRFSLVKSTNIRLTAMKLKTNQVAIAQILKCN-ETDRLFCIAVTHLKARNGWE 238

Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIR 196
                   +         +    P         +       E   S   L +     +  
Sbjct: 239 RFRYAQGADLLENLKRITHEAEIPLIVCGDFNADPTEEVYKEFSTSSLNLNSAYKLLSAD 298

Query: 197 ATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP------EATSLLHSARIDTKPR-GWT 249
               +   Y+ W        ++    +D+I  S        A SLL   +I       + 
Sbjct: 299 GL--SEPPYTTWKIRPSGECRHT---LDYIWYSQHALKVDSALSLLTEEQIGPNRLPSFN 353

Query: 250 KPSDHTPVIVSLDIPEPRKK 269
            PSDH  ++      E   +
Sbjct: 354 YPSDHLSLVCDFTFNEDPDR 373


>gi|325273997|ref|ZP_08140156.1| endonuclease/exonuclease/phosphatase [Pseudomonas sp. TJI-51]
 gi|324100886|gb|EGB98573.1| endonuclease/exonuclease/phosphatase [Pseudomonas sp. TJI-51]
          Length = 284

 Score = 43.2 bits (100), Expect = 0.045,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 14/60 (23%)

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           +F  +            +DHI+LS   T  L    +  +P      SDH PV V + +P+
Sbjct: 228 TFPSWRPQ-------RCLDHILLSSSLT--LERVEVLAQP-----ISDHLPVAVEIRLPD 273


>gi|313496499|gb|ADR57865.1| Endonuclease/exonuclease/phosphatase [Pseudomonas putida BIRD-1]
          Length = 284

 Score = 43.2 bits (100), Expect = 0.045,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 14/60 (23%)

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           +F  +            +DHI+LS   T  L    +  +P      SDH PV V + +P+
Sbjct: 228 TFPSWRPQ-------RCLDHILLSSSLT--LERVEVLAQP-----ISDHLPVAVEIRLPD 273


>gi|205373613|ref|ZP_03226416.1| putative exodeoxyribonuclease [Bacillus coahuilensis m4-4]
          Length = 46

 Score = 43.2 bits (100), Expect = 0.045,   Method: Composition-based stats.
 Identities = 9/30 (30%), Positives = 12/30 (40%)

Query: 29 NPDIICLQETKTEDKNFPFETLQSLNYHIE 58
          + DI CLQETK +      +      Y   
Sbjct: 2  DADIFCLQETKVQYGQIELDLPGYYQYWNY 31


>gi|148238331|ref|NP_001089542.1| angel homolog 2 [Xenopus laevis]
 gi|66911787|gb|AAH97844.1| MGC115586 protein [Xenopus laevis]
          Length = 536

 Score = 43.2 bits (100), Expect = 0.045,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 5/46 (10%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIET 59
           R+ N+   + + N DI+CLQE   ++ ++  +    L+SL YH E 
Sbjct: 199 RLPNILKELADMNADILCLQEV--QENHYRTQIKPSLESLGYHCEY 242


>gi|26986873|ref|NP_742298.1| endonuclease/exonuclease/phosphatase [Pseudomonas putida KT2440]
 gi|148545402|ref|YP_001265504.1| endonuclease/exonuclease/phosphatase [Pseudomonas putida F1]
 gi|24981475|gb|AAN65762.1|AE016202_5 conserved hypothetical protein [Pseudomonas putida KT2440]
 gi|148509460|gb|ABQ76320.1| Endonuclease/exonuclease/phosphatase [Pseudomonas putida F1]
          Length = 284

 Score = 43.2 bits (100), Expect = 0.045,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 14/60 (23%)

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           +F  +            +DHI+LS   T  L    +  +P      SDH PV V + +P+
Sbjct: 228 TFPSWRPQ-------RCLDHILLSSSLT--LERVEVLAQP-----ISDHLPVAVEIRLPD 273


>gi|125531835|gb|EAY78400.1| hypothetical protein OsI_33487 [Oryza sativa Indica Group]
          Length = 450

 Score = 43.2 bits (100), Expect = 0.045,   Method: Composition-based stats.
 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 7/43 (16%)

Query: 2   SVVTVATWNVNSIR------ARIHNLAAWIKENNPDIICLQET 38
               + T+NV  IR       R+  L   I+ +NPD IC QE 
Sbjct: 141 KTFKIMTYNVW-IREDIELHRRLGALGDLIQLHNPDFICFQEV 182


>gi|294627673|ref|ZP_06706255.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|294667101|ref|ZP_06732326.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292598025|gb|EFF42180.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292603111|gb|EFF46537.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 255

 Score = 43.2 bits (100), Expect = 0.046,   Method: Composition-based stats.
 Identities = 15/95 (15%), Positives = 30/95 (31%), Gaps = 14/95 (14%)

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
             +A    +      + +        R    +  +++F  +  D         IDHI++S
Sbjct: 170 HPNAMLMGDFNCMADRPEMQSLYRHTRLQPPSCDVHTFPSWRPD-------RAIDHILVS 222

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
                      I+         SDH  V + + +P
Sbjct: 223 DSLV-------IEHTEAIPAAFSDHLAVGMDIRVP 250


>gi|21241492|ref|NP_641074.1| hypothetical protein XAC0721 [Xanthomonas axonopodis pv. citri str.
           306]
 gi|21106837|gb|AAM35610.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
           str. 306]
          Length = 245

 Score = 43.2 bits (100), Expect = 0.046,   Method: Composition-based stats.
 Identities = 15/95 (15%), Positives = 30/95 (31%), Gaps = 14/95 (14%)

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
             +A    +      + +        R    +  +++F  +  D         IDHI++S
Sbjct: 160 HPNAMLMGDFNCMADRPEMQSLYRHTRLQPPSCDVHTFPSWRPD-------RAIDHILVS 212

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
                      I+         SDH  V + + +P
Sbjct: 213 DSLV-------IEHTEAIPAAFSDHLAVGMDIRVP 240


>gi|331014877|gb|EGH94933.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. lachrymans str. M302278PT]
          Length = 291

 Score = 42.9 bits (99), Expect = 0.046,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 14/61 (22%)

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           +F  +            +DHI+LSP  T  L   ++   P      SDH PV V + +P 
Sbjct: 230 TFPSWRPQ-------RCLDHILLSPTLT--LERVQVLAHP-----ISDHLPVAVEIRLPA 275

Query: 266 P 266
            
Sbjct: 276 S 276


>gi|330965675|gb|EGH65935.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. actinidiae str. M302091]
          Length = 291

 Score = 42.9 bits (99), Expect = 0.046,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 14/61 (22%)

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           +F  +            +DHI+LSP  T  L   ++   P      SDH PV V + +P 
Sbjct: 230 TFPSWRPQ-------RCLDHILLSPTLT--LERVQVLAHP-----ISDHLPVAVEIRLPA 275

Query: 266 P 266
            
Sbjct: 276 S 276


>gi|330874571|gb|EGH08720.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. morsprunorum str. M302280PT]
          Length = 291

 Score = 42.9 bits (99), Expect = 0.046,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 14/61 (22%)

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           +F  +            +DHI+LSP  T  L   ++   P      SDH PV V + +P 
Sbjct: 230 TFPSWRPQ-------RCLDHILLSPTLT--LERVQVLAHP-----ISDHLPVAVEIRLPA 275

Query: 266 P 266
            
Sbjct: 276 S 276


>gi|330501089|ref|YP_004377958.1| endonuclease/exonuclease/phosphatase [Pseudomonas mendocina NK-01]
 gi|328915375|gb|AEB56206.1| endonuclease/exonuclease/phosphatase [Pseudomonas mendocina NK-01]
          Length = 290

 Score = 42.9 bits (99), Expect = 0.046,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 14/62 (22%)

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           +F  +            +DHI+LS E    L    + ++P      SDH PV V + +PE
Sbjct: 229 TFPSWRPQ-------RCLDHILLSSELE--LGRVDVLSQP-----ISDHLPVAVEIRLPE 274

Query: 266 PR 267
            +
Sbjct: 275 AQ 276


>gi|28867571|ref|NP_790190.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|213971019|ref|ZP_03399140.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. tomato T1]
 gi|301385582|ref|ZP_07234000.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. tomato Max13]
 gi|302058834|ref|ZP_07250375.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. tomato K40]
 gi|302132137|ref|ZP_07258127.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. tomato NCPPB 1108]
 gi|28850806|gb|AAO53885.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. tomato str. DC3000]
 gi|213924255|gb|EEB57829.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. tomato T1]
          Length = 291

 Score = 42.9 bits (99), Expect = 0.046,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 14/61 (22%)

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           +F  +            +DHI+LSP  T  L   ++   P      SDH PV V + +P 
Sbjct: 230 TFPSWRPQ-------RCLDHILLSPTLT--LERVQVLAHP-----ISDHLPVAVEIRLPA 275

Query: 266 P 266
            
Sbjct: 276 S 276


>gi|77551044|gb|ABA93841.1| retrotransposon protein, putative, LINE subclass [Oryza sativa
           Japonica Group]
          Length = 362

 Score = 42.9 bits (99), Expect = 0.046,   Method: Composition-based stats.
 Identities = 25/214 (11%), Positives = 60/214 (28%), Gaps = 5/214 (2%)

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL-PHGN 117
               K  N VA+    +    +             FI            +        G+
Sbjct: 103 FYSLKFPNVVALSEDMRRAWRIRAEMSYKSLKDNLFIITFSMKGDYNFVLQGGPWLHRGD 162

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
                 +D   S     ++   +  E           N+       +N  +W  +     
Sbjct: 163 ASLIADFDGLTSPSMLAVKIKLKGREEFRRFNLRQSSNLPWMVTSDFNEALWHFEQFSRT 222

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
              +S  +                  L   +D   + W  N  +R+D  +       ++ 
Sbjct: 223 PRNESQMQAFRDVMQICELRDFGFKGLPHTYDNRREGW-NNVKVRLDRAIADDRWRDIVT 281

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271
           +A++       +  SDH P++++  + +  + ++
Sbjct: 282 NAQVVHLV---SPCSDHCPILLNFHVKDDSRTRK 312


>gi|20502719|gb|AAM22579.1|AF390107_1 RgfB [Streptococcus agalactiae]
          Length = 271

 Score = 42.9 bits (99), Expect = 0.047,   Method: Composition-based stats.
 Identities = 42/283 (14%), Positives = 80/283 (28%), Gaps = 38/283 (13%)

Query: 5   TVATWN------VNSIRARIHNLAAW---IKENNPDIICLQETKTEDKNFPFETLQSLNY 55
              T N      VN     +  L      I     DIICLQE              S NY
Sbjct: 3   KCLTLNTHSWMEVN----ALKKLFDLAEHIFREKYDIICLQEV--NQSISSPLAKSSPNY 56

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
           H        +     L     +    +L G        +    ++   + + I +L    
Sbjct: 57  HPIEGTPALHQDNFAL----QLVHYLNLQGLHYHWTWAYNHIGYSKYHEGVAILSLKPLK 112

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
            N I  +  DD+  +  R    A   L  +   + +   ++                   
Sbjct: 113 PNDILVSAVDDETDYHTRRALVAETTLNDKVVTVVS--LHLSWFEKGFAEEWKRLETTLL 170

Query: 176 TLEVRQSFQKLQNMGF---------------TDAIRATHDTHHLYSFWDYYADSWSKNKG 220
            +E         N                   D+ +  +     ++            K 
Sbjct: 171 EVETPLLLMGDFNNPTGNQGYELVLNSPLALKDSHQIANHVFGDHTIMADIDGWEGNKKA 230

Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +++DHI  S +    + S+++  +       SDH  + ++L++
Sbjct: 231 LKVDHIFTSEDL--SISSSQLVFEGGEAPVVSDHYGLEITLNL 271


>gi|74825508|sp|Q9NBX4|RTXE_DROME RecName: Full=Probable RNA-directed DNA polymerase from transposon
           X-element; AltName: Full=Reverse transcriptase
 gi|8925303|gb|AAF81411.1|AF237761_2 unknown [Drosophila melanogaster]
          Length = 908

 Score = 42.9 bits (99), Expect = 0.047,   Method: Composition-based stats.
 Identities = 31/268 (11%), Positives = 66/268 (24%), Gaps = 53/268 (19%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           M  + +  WN + +  ++  +  +++ +  D++ L ET  +    P        +   T 
Sbjct: 1   MMPLRILVWNADGVSTKLPEVECFVRRHEIDVLLLSETHCKGAETPKL----FGFVAYTA 56

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
              S       +                        A   +    +      +  G    
Sbjct: 57  NDPSGGNAKGGAAILIK------NSLAHFPLTPIATAKVQLAPAVIETALGPISFGAVYC 110

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             ++       K                    ++         +N   W   A  + +  
Sbjct: 111 PPRFAWTTDEFKD----------------ILEEFQTKFIVAGDWNASHWLWGAGRSNQRG 154

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR-----IDHIMLSPEATSL 235
            +   L      D++     T + Y              G R     ID  +        
Sbjct: 155 IALANLVLNSEVDSLATGGPTRYPY--------------GCRGSPGYIDFALTKGVL--- 197

Query: 236 LHSARIDTKPRG-WTKPSDHTPVIVSLD 262
                I           SDH P++++LD
Sbjct: 198 ----GIHANISAVVELSSDHLPLVITLD 221


>gi|228473947|ref|ZP_04058688.1| endonuclease/exonuclease/phosphatase [Capnocytophaga gingivalis
           ATCC 33624]
 gi|228274461|gb|EEK13302.1| endonuclease/exonuclease/phosphatase [Capnocytophaga gingivalis
           ATCC 33624]
          Length = 343

 Score = 42.9 bits (99), Expect = 0.047,   Method: Composition-based stats.
 Identities = 48/274 (17%), Positives = 90/274 (32%), Gaps = 50/274 (18%)

Query: 4   VTVATWNVNSIRARI-------------HNLAAWIKENNPDIICLQE--TKTEDKNFPFE 48
           ++V ++NV     R+               +  ++KE +P I+ LQE   K E ++FPF 
Sbjct: 102 LSVMSFNV-----RLFNHYKWSSDTLLREKILTFVKEEHPKILALQEFYYK-EKESFPF- 154

Query: 49  TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108
                 Y  +    K        +      I+     D        + A   +N  TLR+
Sbjct: 155 ------YKYKKFIYKHKKDKIGQAILSDYPIINSGSLDFPHTGNNGVYADIVVNGDTLRL 208

Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168
            +L+    +   +   D      KR      +R  +++  +   + +    P+       
Sbjct: 209 YSLHFESFHIEDT---DISQENSKRIFLKLPRRFAIQQAQVELFNAHADSCPYPIVVCGD 265

Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
           + N A   L  +   + L +                Y         +      RID+I+ 
Sbjct: 266 FNNTAFSYLYQKFQDRGLVDSFEEAGSGFGRTYDFPY---------FP----FRIDYILA 312

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
            P     + S ++ T        SDH P+  +L 
Sbjct: 313 DPYF--KITSHKVYT----GRDYSDHFPIRATLK 340


>gi|242760642|ref|XP_002340032.1| hypothetical protein TSTA_061350 [Talaromyces stipitatus ATCC
           10500]
 gi|218723228|gb|EED22645.1| hypothetical protein TSTA_061350 [Talaromyces stipitatus ATCC
           10500]
          Length = 244

 Score = 42.9 bits (99), Expect = 0.047,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 18/56 (32%), Gaps = 3/56 (5%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278
           ID +  S    + + S   DTK   W    DH P+    D+             N 
Sbjct: 144 IDLVWASHNLANRVVSC--DTKLEWWYGA-DHVPISTQFDLTAIHVPPLVRKQWNA 196


>gi|197104868|ref|YP_002130245.1| hypothetical protein PHZ_c1402 [Phenylobacterium zucineum HLK1]
 gi|196478288|gb|ACG77816.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
          Length = 324

 Score = 42.9 bits (99), Expect = 0.048,   Method: Composition-based stats.
 Identities = 35/264 (13%), Positives = 69/264 (26%), Gaps = 45/264 (17%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V   N+ S    + +   W+   +PD++ ++ET         +      +H+      
Sbjct: 106 LKVVQINLWSRNGSLDDTLNWVLAQDPDVVVMEET---SPPLREKVRGLAGWHV------ 156

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
                        + I++  P    +           +     R             +  
Sbjct: 157 -------SCATCEVMILSRRPPIRSEAVRLRGPNPGPLTRAVFRDRRGRYAVIGVHYAWP 209

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
            D +    +         +   E  I AGD+N  P                    +    
Sbjct: 210 TDMEDHQAQEAGLAEVIAMGPRERTIVAGDFNSAPWSFSRRRWDAEFGLIRRDRALLTWP 269

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
                                  ++ + A          IDH+    +      +  ++ 
Sbjct: 270 ALQYKRLRWLG------------WFPFLA----------IDHVYAGSDWA----TVSVER 303

Query: 244 KPRGWTKPSDHTPVIVSLDIPEPR 267
            PR     SDH PV++SL    PR
Sbjct: 304 GPRLG---SDHYPVVMSLAPAAPR 324


>gi|22538094|ref|NP_688945.1| hypothetical protein SAG1958 [Streptococcus agalactiae 2603V/R]
 gi|76797931|ref|ZP_00780192.1| RgfB [Streptococcus agalactiae 18RS21]
 gi|22535000|gb|AAN00818.1|AE014280_10 conserved hypothetical protein [Streptococcus agalactiae 2603V/R]
 gi|76586705|gb|EAO63202.1| RgfB [Streptococcus agalactiae 18RS21]
          Length = 276

 Score = 42.9 bits (99), Expect = 0.048,   Method: Composition-based stats.
 Identities = 42/285 (14%), Positives = 79/285 (27%), Gaps = 38/285 (13%)

Query: 2   SVVTVATWN------VNSIRARIHNLAAW---IKENNPDIICLQETKTEDKNFPFETLQS 52
           S+    T N      VN     +  L      I     DIICLQE              S
Sbjct: 5   SMAKCLTLNTHSWMEVN----ALKKLFDLAEHIFREKYDIICLQEV--NQSISSPLAKSS 58

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
            NYH        +     L     +    +L G        +    ++   + + I +L 
Sbjct: 59  PNYHPIEGTPALHQDNFAL----QLVHYLNLQGLHYHWTWAYNHIGYSKYHEGVAILSLK 114

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                 I  +  DD+  +  R    A   L  +   + +   +                 
Sbjct: 115 PLKPEDILVSAVDDETDYHTRRALVAETTLNDKVVTVVS--LHFSWFEKGFAEEWKRLET 172

Query: 173 ACFTLEVRQSFQKLQNMGF---------------TDAIRATHDTHHLYSFWDYYADSWSK 217
               +E         N                   D+ +  +     ++           
Sbjct: 173 TLLEVETPLLLMGDFNNPTGNQGYELVLNSPLALKDSHQIANHVFGDHTIMADIDGWEGN 232

Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
            K +++DHI  S +    + S+++  +       SDH  + +++D
Sbjct: 233 KKALKVDHIFTSEDL--SISSSQVVFEGGEAPVVSDHYGLEITMD 275


>gi|47214396|emb|CAG00877.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 256

 Score = 42.9 bits (99), Expect = 0.048,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 23/42 (54%), Gaps = 9/42 (21%)

Query: 4  VTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQET 38
          +++ +WN++ +       RAR   L++ +   + D++ LQE 
Sbjct: 7  LSLISWNIDGLDGEKQPERAR--GLSSSLTSESADVVFLQEL 46


>gi|153005502|ref|YP_001379827.1| endonuclease/exonuclease/phosphatase [Anaeromyxobacter sp. Fw109-5]
 gi|152029075|gb|ABS26843.1| Endonuclease/exonuclease/phosphatase [Anaeromyxobacter sp. Fw109-5]
          Length = 289

 Score = 42.9 bits (99), Expect = 0.049,   Method: Composition-based stats.
 Identities = 11/68 (16%), Positives = 27/68 (39%), Gaps = 7/68 (10%)

Query: 197 ATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTP 256
                    + W   + +       R+D +++   + + +  A ++       + SDH P
Sbjct: 229 HVDPLPSWETTWSSGSPAE------RLDALLVGRASAAAIVRAVVERG-TDVARASDHQP 281

Query: 257 VIVSLDIP 264
           V++ L +P
Sbjct: 282 VVLDLRLP 289



 Score = 41.7 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 25/59 (42%), Gaps = 22/59 (37%)

Query: 2  SVVTVATWNVN------------S----------IRARIHNLAAWIKENNPDIICLQET 38
          +V+ VATWNV+                       ++A++  +A  +   + D++ LQE 
Sbjct: 33 TVLRVATWNVHDLFDAEDRLLPPGAEDALPSPEAVKAKLDAVAEVLLRVDADVVLLQEV 91


>gi|52785878|ref|YP_091707.1| hypothetical protein BLi02127 [Bacillus licheniformis ATCC 14580]
 gi|52348380|gb|AAU41014.1| conserved hypothetical protein [Bacillus licheniformis ATCC 14580]
          Length = 243

 Score = 42.9 bits (99), Expect = 0.049,   Method: Composition-based stats.
 Identities = 40/262 (15%), Positives = 78/262 (29%), Gaps = 33/262 (12%)

Query: 3   VVT--VATWNVNSIRARIHNL-----AAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55
           ++   + T+N++  + R   +     A  I ++  DII L E    D++F          
Sbjct: 2   IMKFSIMTFNIHHGKGRDRRVDLGRTAGVIAQSGCDIIGLNEV---DRHFSN-------- 50

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
             +   Q       +   Y     ++   GD  + +            +  R  +     
Sbjct: 51  RSDYEDQIGRLAEQLNMHYAYCPSLSLSSGDSSEKRQYGNALLTRFPIKKERHHSFNFVK 110

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
           G     +  +  +    R  R     L L   L       +I +  +   P+I   D   
Sbjct: 111 GLIEGRSLLEADVRIGDRLFRVFVTHLSLNPWLHGKQTDFLIEKVQESDLPVIVTGDFNM 170

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
               R   +  + +               ++   +           R+D+I LSP     
Sbjct: 171 KPYSRGWKKVAEKLADLWDESQY---GQGFTHPSHRPR-------RRLDYIFLSPSF--H 218

Query: 236 LHSARIDTKPRGWTKPSDHTPV 257
           + +A I          SDH P+
Sbjct: 219 VSAAEI---VAVDPNASDHLPL 237


>gi|156541496|ref|XP_001601120.1| PREDICTED: similar to secreted protein [Nasonia vitripennis]
          Length = 1163

 Score = 42.9 bits (99), Expect = 0.049,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 4/54 (7%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKN--FPFETLQSL 53
           S VT+ +WNV  +R +  N++ +I     DII L ET  ++ +  FP      +
Sbjct: 209 SEVTIISWNVRGVRDKWSNISQYINSY--DIIFLCETFLDENDYSFPARGFNEI 260


>gi|149376400|ref|ZP_01894162.1| Metal-dependent hydrolase [Marinobacter algicola DG893]
 gi|149359241|gb|EDM47703.1| Metal-dependent hydrolase [Marinobacter algicola DG893]
          Length = 286

 Score = 42.9 bits (99), Expect = 0.049,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 23/48 (47%), Gaps = 11/48 (22%)

Query: 221 IR----IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
            R    +DHI++SP     +  + + + P      SDH P+ + + +P
Sbjct: 239 WRPERALDHILVSPSLE--IRRSEVVSYP-----VSDHLPIAMDIKLP 279


>gi|115747640|ref|XP_001189235.1| PREDICTED: similar to endonuclease/reverse transcriptase
           [Strongylocentrotus purpuratus]
 gi|115918140|ref|XP_785273.2| PREDICTED: similar to endonuclease/reverse transcriptase
           [Strongylocentrotus purpuratus]
          Length = 942

 Score = 42.9 bits (99), Expect = 0.050,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 36/97 (37%), Gaps = 3/97 (3%)

Query: 4   VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + + N   ++++     L   I++ +PDIIC  E+  E   +  E     NY I    
Sbjct: 29  LKLLSINCRGLKSKKKQRDLLGAIQQEDPDIICGCESHLEGSYYTSEIF-PRNYDIYRKD 87

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT 98
           +  + G  + +  + I +     G            T
Sbjct: 88  RDRHGGGVLQTDCESIWVKIFFAGKQPLYVGSIYRPT 124


>gi|260433467|ref|ZP_05787438.1| endonuclease/exonuclease/phosphatase family protein [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260417295|gb|EEX10554.1| endonuclease/exonuclease/phosphatase family protein [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 234

 Score = 42.9 bits (99), Expect = 0.050,   Method: Composition-based stats.
 Identities = 33/268 (12%), Positives = 66/268 (24%), Gaps = 44/268 (16%)

Query: 1   MSVVTVATWNVN---SI--RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55
           +  + +A++N+     +  R +   +   +     DI+ LQE    DK  P         
Sbjct: 4   LPKLRLASYNIQKCVGLDLRRQPQRILQVLDRLGADIVVLQE---ADKRLP--------- 51

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
                 + +     +L +     +     G         I     I  +     +L    
Sbjct: 52  -----PRPAALPHFMLDEAGWKIVDLGGAGSLGWHGNAVIWRGDHIRVRRAAHHDLPGLE 106

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
                  ++D  I  ++                I     +               N+   
Sbjct: 107 PRGAVRVEFDTHIGPLRVMGMHLGLFSAWRRQQILHLRRDGRALDRMPTVWAGDFNEWSR 166

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
              + +    ++ +    +  A                         +D I L     +L
Sbjct: 167 QPILDRLAPDMRFLPPVPSFPAAQPLGA-------------------LDRIALGGGLEAL 207

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            H        R     SDH PV   L +
Sbjct: 208 AHGV---HGERPAHIASDHLPVWADLRL 232


>gi|260797709|ref|XP_002593844.1| hypothetical protein BRAFLDRAFT_75696 [Branchiostoma floridae]
 gi|229279074|gb|EEN49855.1| hypothetical protein BRAFLDRAFT_75696 [Branchiostoma floridae]
          Length = 403

 Score = 42.9 bits (99), Expect = 0.050,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 5/39 (12%)

Query: 5   TVATWNVNSI--RA---RIHNLAAWIKENNPDIICLQET 38
           T+ TWN+N +  R    R   +   I    PD++ LQE 
Sbjct: 126 TLLTWNINGLDQRNILERTKAVCNTINSLYPDVVFLQEV 164


>gi|147798168|emb|CAN60702.1| hypothetical protein VITISV_015869 [Vitis vinifera]
          Length = 3028

 Score = 42.9 bits (99), Expect = 0.050,   Method: Composition-based stats.
 Identities = 23/167 (13%), Positives = 55/167 (32%), Gaps = 7/167 (4%)

Query: 94   FIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGD 153
                   +  + + +G   +          ++   S +        + L  EE     G 
Sbjct: 1965 VFWDKRVLELEGMEVGLFSVSCRFKNCEDGFNWVFSGVYGPTVKRYRELFWEELGAIRGL 2024

Query: 154  YNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD 213
            ++        +N I + N++     +  S ++   +     +R        +++    + 
Sbjct: 2025 WSDPWCIGGDFNLIRFPNESRRGGRLSSSMRRFSEVIDDLDLRDLPLQGGPFTW----SG 2080

Query: 214  SWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
              +     R+D  ++S +  S    A   T PR     SDH P+++ 
Sbjct: 2081 GLNNQAMTRLDRFLVSEDWESHFKGAVQCTLPR---PVSDHFPILLD 2124


>gi|21243041|ref|NP_642623.1| hypothetical protein XAC2306 [Xanthomonas axonopodis pv. citri
          str. 306]
 gi|21108551|gb|AAM37159.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
          str. 306]
          Length = 278

 Score = 42.9 bits (99), Expect = 0.050,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 7/63 (11%)

Query: 4  VTVATWNVNSIR----ARIHNLAAWIKENNPDIICLQET---KTEDKNFPFETLQSLNYH 56
          +T+ T N++  R    AR  ++A  +K   PD+I LQE    +   +N      + L Y 
Sbjct: 23 MTLVTLNLHHDREDWPARRAHIAKELKRLAPDVIALQEVIERRGSVENQAAWLARKLGYD 82

Query: 57 IET 59
             
Sbjct: 83 YIF 85


>gi|163734486|ref|ZP_02141926.1| hypothetical protein RLO149_09579 [Roseobacter litoralis Och 149]
 gi|161392494|gb|EDQ16823.1| hypothetical protein RLO149_09579 [Roseobacter litoralis Och 149]
          Length = 280

 Score = 42.9 bits (99), Expect = 0.051,   Method: Composition-based stats.
 Identities = 35/270 (12%), Positives = 74/270 (27%), Gaps = 35/270 (12%)

Query: 4   VTVATWNV---NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPF--ETLQSLNYHIE 58
           + V +WNV   N   ARI   A  +   NPDI   QE        P     +++   ++ 
Sbjct: 36  LRVLSWNVFNENPDAARI---ADALTALNPDIALFQEV------LPAHIAVIKASFPYVS 86

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
                +  G                        ++     +  +   +   +        
Sbjct: 87  VARDYALKGELCHLVIASRFPTRRETILFHSDTSKPAPTRWARHAGWVEFLDSLSVDVVV 146

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ--PHDCYNPIIWENDACFT 176
             +  +          +  ++++ EL E                 + Y            
Sbjct: 147 PGARPFRVVNLHTSAGVSPSARQAELAETQSHFDCEGPCLVAGDFNSYAVPWLAPLLAIP 206

Query: 177 LEVRQSFQKLQNMGFTDAIRATH---DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
           L  R     +      ++           H  +F  +             D  + + + T
Sbjct: 207 LHYRPKDWLIFERRALNSWFQRQGFAPAVHGVTFPKFRLQM---------D-QLFTRDIT 256

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             + +A I+   R W   SDH P+ + +++
Sbjct: 257 --VETAVIER--RLW--GSDHRPLSLEINL 280


>gi|297161245|gb|ADI10957.1| hypothetical protein SBI_07837 [Streptomyces bingchenggensis BCW-1]
          Length = 271

 Score = 42.9 bits (99), Expect = 0.051,   Method: Composition-based stats.
 Identities = 31/285 (10%), Positives = 67/285 (23%), Gaps = 42/285 (14%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           +VV V ++N+ S+R     L   ++   PD++C+QE                        
Sbjct: 16  AVVRVLSYNIRSMRDDREALVRVVRACAPDVLCVQE---------------------APR 54

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
              +   A     +   + T                     T+ + + ++   H   + +
Sbjct: 55  FFRWRKAASWLARETGLVHTTGGATATGPMLLTSLRAHVERTEDILLPHVPGLHRRGLAT 114

Query: 122 TKYDDKISWIKRFLRFASQRLEL----EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
                                      E          +           +   D     
Sbjct: 115 AVLRFGGGHRGDNGIRLGVVSCHLSLAEAERYDQAGMVLDQLARLDVPYTVLAGDINDPP 174

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
           E R   +    +    A           ++         +     ID +  +      + 
Sbjct: 175 EGRAFRRLAGPLRDAWATEPW---GSELTYPP--GQPRER-----IDALFATEGVE--IL 222

Query: 238 SARIDTKPRG-----WTKPSDHTPVIVSLDIPEPRKKQQDSTSQN 277
              +     G         SDH PV+ +L +P         ++  
Sbjct: 223 GCGVPAGLPGVTEADLRAASDHLPVLAALRLPRVSSAVPAGSTGK 267


>gi|149277549|ref|ZP_01883690.1| hypothetical protein PBAL39_05158 [Pedobacter sp. BAL39]
 gi|149231782|gb|EDM37160.1| hypothetical protein PBAL39_05158 [Pedobacter sp. BAL39]
          Length = 278

 Score = 42.9 bits (99), Expect = 0.051,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 3/53 (5%)

Query: 212 ADSWSKNKGIR-IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           ++ +   KG+  IDHI +S + T       I T       PSDH PV+  + +
Sbjct: 228 SNGFKIPKGMGVIDHIFMSKQFT--AQKWGILTDTYFGKYPSDHFPVLAVVAL 278


>gi|254475984|ref|ZP_05089370.1| endonuclease/exonuclease/phosphatase family protein [Ruegeria sp.
           R11]
 gi|214030227|gb|EEB71062.1| endonuclease/exonuclease/phosphatase family protein [Ruegeria sp.
           R11]
          Length = 271

 Score = 42.9 bits (99), Expect = 0.052,   Method: Composition-based stats.
 Identities = 41/275 (14%), Positives = 79/275 (28%), Gaps = 25/275 (9%)

Query: 3   VVTVATWNVN---SIRARIHNLAAWIKEN--NPDIICLQET-----KTED-KNFPFETLQ 51
           ++ +AT+N+     +  +I      I +     DI+ LQE      ++ED       T +
Sbjct: 1   MIKLATYNIQYCMGLDEKID--PDRIADAVGGADILALQEVDRFWERSEDQDQVEELTRR 58

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
             + H         +   +  +   + I++  P          +     +      +   
Sbjct: 59  LPHVHHVFAPGIDVHHPRLGRRQHGLMILSRWPILSHRTMPLPMRPHPDLFVGQSLLQ-- 116

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
                 P    +  +           A Q       +  A     +    +        +
Sbjct: 117 EAVIATPEGVLRLYNTHFNYGDEALIAEQAAFSAAVMRQALQAGGVWGGGNVERDKSNGD 176

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI-----RIDHI 226
           DA    E       L     +DA R    +  +  +      S            R+DH+
Sbjct: 177 DAPPMPETTVLVGDLNVGPTSDAYRILMRSGLVDPWVS-LGQSEEGVTSSHLDDKRLDHV 235

Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           + + +  S      IDT   G    SDH PV +  
Sbjct: 236 LCTEDCISDDAQMWIDTTAVG----SDHMPVWLQF 266


>gi|329928380|ref|ZP_08282250.1| 5'-nucleotidase, C-terminal domain protein [Paenibacillus sp. HGF5]
 gi|328937816|gb|EGG34222.1| 5'-nucleotidase, C-terminal domain protein [Paenibacillus sp. HGF5]
          Length = 2084

 Score = 42.9 bits (99), Expect = 0.052,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 29/72 (40%), Gaps = 16/72 (22%)

Query: 200  DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP------SD 253
                 Y++  Y  +S        +DHI++S   T    S ++D        P      SD
Sbjct: 1075 PLKEQYTY-TYDGNSQV------LDHILVSKNLT---RSTQVDIVHLNADFPASKGRVSD 1124

Query: 254  HTPVIVSLDIPE 265
            H PV+  +D+ E
Sbjct: 1125 HDPVVAQIDLKE 1136


>gi|70942558|ref|XP_741431.1| exodeoxyribonuclease III [Plasmodium chabaudi chabaudi]
 gi|56519806|emb|CAH79414.1| exodeoxyribonuclease III, putative [Plasmodium chabaudi chabaudi]
          Length = 652

 Score = 42.9 bits (99), Expect = 0.052,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 28/69 (40%), Gaps = 11/69 (15%)

Query: 198 THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL-LHSARIDTKPRGWTKPSDHTP 256
             D +  ++ WD Y  +   N+G RID+I +      + +                  +P
Sbjct: 409 YPDMNGKFTCWDMYKQNRITNEGSRIDYIFVDSILFEMFIKKYNHLYD----------SP 458

Query: 257 VIVSLDIPE 265
           +I++ D+ E
Sbjct: 459 IILTKDLEE 467


>gi|281342084|gb|EFB17668.1| hypothetical protein PANDA_018675 [Ailuropoda melanoleuca]
          Length = 115

 Score = 42.9 bits (99), Expect = 0.053,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 36/94 (38%), Gaps = 12/94 (12%)

Query: 188 NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRG 247
            M  TD  RA H      +F+     ++S     RIDHI+    A +      I      
Sbjct: 30  QMDLTDIFRAFHPKAAECTFFSRAHGTFS-----RIDHILGHKSALNKYRKIEIIPFI-- 82

Query: 248 WTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
               SDH    + LD+ + +K  + ++   +  I
Sbjct: 83  ---FSDHNA--MKLDVNQKKKFGKTTSRWRLMNI 111


>gi|219111411|ref|XP_002177457.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217411992|gb|EEC51920.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 409

 Score = 42.9 bits (99), Expect = 0.053,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 35/120 (29%), Gaps = 10/120 (8%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC----- 60
           V++WN      R   L   I   + DI+CLQE      +  F+ ++ L Y  +       
Sbjct: 57  VSSWN-----FRKDLLRERIATVDADIVCLQEVSPVSFDTDFDFMRELGYDGKEMFKKGR 111

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            + +        +     +                  +    T    I N +L  G    
Sbjct: 112 FRPATFWKTSRCEIVTPPVHKDRTLLTAFRVLPPPTVSDPAETHVWYILNCHLQAGKEGG 171


>gi|145349696|ref|XP_001419264.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144579495|gb|ABO97557.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 249

 Score = 42.9 bits (99), Expect = 0.053,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 9/60 (15%)

Query: 204 LYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            Y++    + +        +D+I+ S      + SA I       +  SDH P++ +LDI
Sbjct: 159 RYTWQSGSSKAK-------LDYILTSRADIE-VVSAAI-RHDLVTSSVSDHFPLVATLDI 209


>gi|322411016|gb|EFY01924.1| hypothetical protein SDD27957_01170 [Streptococcus dysgalactiae
           subsp. dysgalactiae ATCC 27957]
          Length = 277

 Score = 42.9 bits (99), Expect = 0.054,   Method: Composition-based stats.
 Identities = 34/276 (12%), Positives = 82/276 (29%), Gaps = 20/276 (7%)

Query: 3   VVTVATWNVNSI--RARIHNLAAW---IKENNPDIICLQETKTEDKNFPFETLQSLNYH- 56
           +  + T N +S      +  L      I     DIICLQE    ++    E    L  + 
Sbjct: 1   MTKLLTLNTHSWMEANALKKLVDLAEHILAEKYDIICLQEI---NQLIESELAMELPSYQ 57

Query: 57  ----IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
                    +  +  + I    +  +        +      + E    ++ Q + + ++ 
Sbjct: 58  PIVGTPAIHKDHFALLLIHYLKKRGQHYYWSWAYNHIGYDIYHEGVAILSKQPIHVSDIL 117

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLI---FAGDYNIIPQP--HDCYNPI 167
           +   +  T       +    +        + +        F G++  + +         I
Sbjct: 118 VSAMDDETDYHTRRSLVAKTKLDGKEVAIVNVHLSWFDKGFLGEWERLEKELLSLNCPLI 177

Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227
           +  +    T +          +   D+ +        +S            +  ++DH+ 
Sbjct: 178 LMGDFNNPTDQDGYQVIMGSPLDLQDSHKIADHIFGDHSIVADIDGWEDNKEAFKVDHVF 237

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            S +    + ++ I  +       SDH  + V+LD 
Sbjct: 238 TSKDFE--IKASHITFEGGDAPVVSDHYGLEVTLDW 271


>gi|323340316|ref|ZP_08080576.1| endonuclease/exonuclease/phosphatase family protein [Lactobacillus
           ruminis ATCC 25644]
 gi|323092265|gb|EFZ34877.1| endonuclease/exonuclease/phosphatase family protein [Lactobacillus
           ruminis ATCC 25644]
          Length = 285

 Score = 42.9 bits (99), Expect = 0.054,   Method: Composition-based stats.
 Identities = 30/279 (10%), Positives = 71/279 (25%), Gaps = 26/279 (9%)

Query: 4   VTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFP----FETLQSLN 54
           + + T N +S+       +I  +   I     D++ LQE       F      + L+SL 
Sbjct: 1   MRMLTLNCHSLLDYDSDKQIQEIVDQIVREEIDVLSLQE--ANQSQFESAIAEDELESLG 58

Query: 55  Y-HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
           Y                    + ++ V        +                 R+    +
Sbjct: 59  YKEPAEGNAIIKKDNFAYRLSRALKKVKLDFKWSWNSSYGEANGLEWGVALFSRLCLTNV 118

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
                 +S    +         + + +   +   + F G+ +   +              
Sbjct: 119 HSTLISSSDFAGNLTKRCVLLAQLSDEMKTVVAAVHFNGENSSEFRHEWSNLMETIAGLG 178

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADS-----WSKNKGI------- 221
                +        +                 ++    +         K  G        
Sbjct: 179 LSNRPLYLLGNFNVDAEVDTGSYTLMCQEFEDTYCSAISKGDGMTVRGKLDGWDDSGISE 238

Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
           R+D+I+    A + +  +RI        + S+H  V++ 
Sbjct: 239 RLDYILT--NAQNEVSYSRICFDGNIGPRISNHAGVLIE 275


>gi|149175989|ref|ZP_01854606.1| deoxyribonuclease gamma (precursor) [Planctomyces maris DSM 8797]
 gi|148845143|gb|EDL59489.1| deoxyribonuclease gamma (precursor) [Planctomyces maris DSM 8797]
          Length = 343

 Score = 42.9 bits (99), Expect = 0.054,   Method: Composition-based stats.
 Identities = 32/283 (11%), Positives = 82/283 (28%), Gaps = 28/283 (9%)

Query: 3   VVTVATWNV----NSIRARIHNLAAWIKE--NNPDIICLQETKTEDKNFPFETLQSLN-- 54
            + +AT+N+    +S + +   +   +       D++ +QE +  D++F  E L+ LN  
Sbjct: 76  TIRIATFNIQVFGHS-KMQKPEVPQILARIIQQFDVVAVQEIRALDQSFLDEFLKILNAG 134

Query: 55  -YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
                          A   +Y        +  ++        +         +       
Sbjct: 135 EQQYGCLVGPRQGRTASKEQYAYFYNTARITVNEKWTYTVIDKYDKLHRPPYVAHFRTLS 194

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
           P  +   +      I+          +   L++      +             +  ++  
Sbjct: 195 PSSSNPFTFSL---INIHTDPDETDQELNVLDDVYRVVANDGSQEDDVILLGDLNVDDQH 251

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
              L          +   T+  ++    + L+S     +  ++   G+   +     +  
Sbjct: 252 LGELGQVSDIMWTVSKTPTNTRKSKQYDNILFS--RRRSQEFTGKSGV---Y-----DFR 301

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQ 276
           +    +    +       SDH P+     I E    +Q S +Q
Sbjct: 302 TRFKLSE--KEAL---TVSDHLPIWAEFHISENGAVRQASAAQ 339


>gi|83949536|ref|ZP_00958269.1| endonuclease/exonuclease/phosphatase family protein [Roseovarius
           nubinhibens ISM]
 gi|83837435|gb|EAP76731.1| endonuclease/exonuclease/phosphatase family protein [Roseovarius
           nubinhibens ISM]
          Length = 340

 Score = 42.9 bits (99), Expect = 0.054,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 21/53 (39%), Gaps = 12/53 (22%)

Query: 223 IDHIMLSPEATSLLHSARI-----DTKP-------RGWTKPSDHTPVIVSLDI 263
           +D+IM++        + RI     D          R     SDH PV + LDI
Sbjct: 288 LDYIMVTRGLRERGAAWRIWHPFDDPDCWNLPELSRALLTASDHYPVTIDLDI 340


>gi|260172525|ref|ZP_05758937.1| hypothetical protein BacD2_11731 [Bacteroides sp. D2]
 gi|315920818|ref|ZP_07917058.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313694693|gb|EFS31528.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 299

 Score = 42.9 bits (99), Expect = 0.054,   Method: Composition-based stats.
 Identities = 30/242 (12%), Positives = 60/242 (24%), Gaps = 15/242 (6%)

Query: 23  AWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTH 82
             I  ++ DI  + E    ++      L+   Y           G      Y+   +   
Sbjct: 72  EIITSHDFDIFGVNEC-LLNQLNDLLELKQYEYIGTGRDDGKEAGEFCPILYKKERVELL 130

Query: 83  LPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRL 142
             G     +     +    +    RI              K D    +        S   
Sbjct: 131 YHGQFWYSETPDKPSKSWNSFCN-RICTW-----GKFKDKKTDKDFFFFSSHFDHVSNEA 184

Query: 143 ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH 202
            +    +       I      +       D             L    ++ +        
Sbjct: 185 RVNSAKLLVQKVQEIAGDLPYFCTGDLNCDPDEEPISFILNSGLFKDSYSISETTPKGPA 244

Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVIVSL 261
               +W+     +  N   RID+I++       + S   I    R     SDH P+++  
Sbjct: 245 GTLHYWN-----FDFNPEHRIDYILVEKSI--KVLSFETITDDARQGRFSSDHYPIMIKA 297

Query: 262 DI 263
           ++
Sbjct: 298 EL 299


>gi|237797954|ref|ZP_04586415.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331020805|gb|EGI00862.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 291

 Score = 42.9 bits (99), Expect = 0.054,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 14/61 (22%)

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           +F  +            +DHI+LSP  T  L   ++  +P      SDH PV V + +P 
Sbjct: 230 TFPSWRPQ-------RCLDHILLSPTLT--LERVQVLAQP-----ISDHLPVAVEIRLPA 275

Query: 266 P 266
            
Sbjct: 276 S 276


>gi|187928145|ref|YP_001898632.1| endonuclease/exonuclease/phosphatase [Ralstonia pickettii 12J]
 gi|187725035|gb|ACD26200.1| Endonuclease/exonuclease/phosphatase [Ralstonia pickettii 12J]
          Length = 287

 Score = 42.9 bits (99), Expect = 0.055,   Method: Composition-based stats.
 Identities = 45/289 (15%), Positives = 87/289 (30%), Gaps = 42/289 (14%)

Query: 6   VATWNVN---------SIRAR-IHNLAAWIKENNPDIICLQETKTEDKNFP--------F 47
           + TWN+          S+ AR +       +    D++CLQE  +   + P         
Sbjct: 5   ILTWNIQWGRGADGHVSL-ARQLKQGREMAE---FDVLCLQEVTSGFSDLPGQPGADQWS 60

Query: 48  ETLQSLNYHI--------------ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR 93
           E  ++L                        +     +   Y     +   P     +   
Sbjct: 61  ELAEALGSEYTVIGGFALERHNGAHVQRFGNAIATRLPVHYIQRHALPCPPDATPCMPRM 120

Query: 94  FIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGD 153
            IEA        LRI   +L + + +      D +  I       + +         AG 
Sbjct: 121 AIEAVVQAPFGVLRIVTTHLEYYSELQRVAQIDALRAIHTEGCARANQPATLGAEPEAGP 180

Query: 154 YNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYA 212
           +  + Q         +   A    +   +    +     DA    H  T    +F  Y  
Sbjct: 181 FRPLAQTKATIICGDFNCKADSMPKRLATAPFAREPALHDAWEIAHGATPQPPTFGVYDR 240

Query: 213 DSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
             W++      D +++S      +    I++     T+ SDH P++++L
Sbjct: 241 ADWTEPAYA-CDFMLISEPLKPRVLRLEINSA----TQASDHQPMLLAL 284


>gi|77412876|ref|ZP_00789080.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           agalactiae 515]
 gi|77161016|gb|EAO72123.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           agalactiae 515]
          Length = 276

 Score = 42.9 bits (99), Expect = 0.055,   Method: Composition-based stats.
 Identities = 42/285 (14%), Positives = 80/285 (28%), Gaps = 38/285 (13%)

Query: 2   SVVTVATWN------VNSIRARIHNLAAW---IKENNPDIICLQETKTEDKNFPFETLQS 52
           S+    T N      VN     +  L      I     DIICLQE              S
Sbjct: 5   SMAKCLTLNTHSWMEVN----ALKKLFDLAEHIFREKYDIICLQEV--NQSISSPLAKSS 58

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
            NYH        +     L     +    +L G        +    ++   + + I +L 
Sbjct: 59  PNYHPIEGTPALHQDNFAL----QLVHYLNLQGLHYHWTWAYNHIGYSKYHEGVAILSLK 114

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                 I  +  DD+  +  R    A   L  +   + +   ++                
Sbjct: 115 PLKPEDILVSAVDDETDYHTRRALVAETTLNDKVVTVVS--LHLSWFEKGFAEEWKRLET 172

Query: 173 ACFTLEVRQSFQKLQNMGF---------------TDAIRATHDTHHLYSFWDYYADSWSK 217
               +E         N                   D+ +  +     ++           
Sbjct: 173 TLLEVETPLLLMGDFNNPTGNQGYELVLNSPLALKDSHQIANHVFGDHTIMADIDGWEGN 232

Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
            K +++DHI  S +    + S+++  +       SDH  + +++D
Sbjct: 233 KKALKVDHIFTSEDL--SISSSQVVFEGGEAPVVSDHYGLEITMD 275


>gi|166363682|ref|YP_001655955.1| hypothetical protein MAE_09410 [Microcystis aeruginosa NIES-843]
 gi|166086055|dbj|BAG00763.1| unknown protein [Microcystis aeruginosa NIES-843]
          Length = 313

 Score = 42.9 bits (99), Expect = 0.056,   Method: Composition-based stats.
 Identities = 37/267 (13%), Positives = 75/267 (28%), Gaps = 48/267 (17%)

Query: 4   VTVATWNVN------SIRARIHNLAAWIKENNPDIICLQE-TKTEDKNFPFETLQSLNYH 56
           +TV T+NVN      S       +   ++ N  D+  L E  K +             Y+
Sbjct: 87  LTVMTYNVNYQLWETS------AVTDLVRANPVDVFGLVEPFKEQAAELLDNVQDLYPYY 140

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                + +  G+++ S+Y   E  T   G      + F     T +   + + +   P  
Sbjct: 141 Y----RATGGGLSLFSRYPITEATTDNLGTRHH--SLFASVNVTGHPIRVVVAHPLAPIS 194

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
            P    +    ++      + +   + + +  + +          +     +        
Sbjct: 195 MPNFINRNQAMVALAAYAAQQSITTVIMGDFNLTSWSIYFRNFIINSGLRSVNLGHGLNP 254

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
                   +  +                                  IDHI +S       
Sbjct: 255 TWFYTDEARSLSHLDHWKQALKIP----------------------IDHIFVS------- 285

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263
            + R+D      +  SDH PVI  L +
Sbjct: 286 QNVRVDQVITLPSGVSDHRPVIAKLRV 312


>gi|84496163|ref|ZP_00995017.1| hypothetical protein JNB_01550 [Janibacter sp. HTCC2649]
 gi|84382931|gb|EAP98812.1| hypothetical protein JNB_01550 [Janibacter sp. HTCC2649]
          Length = 225

 Score = 42.9 bits (99), Expect = 0.057,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 20/45 (44%), Gaps = 14/45 (31%)

Query: 1  MSVVTVATWNVNSIRARIHNLAA-------WIKENNPDIICLQET 38
          M+ + +A++N         +           ++  +PD++CLQE 
Sbjct: 1  MTTIRIASYN-------TRDFLEDPYAAARVVRAIDPDVLCLQEV 38


>gi|114320344|ref|YP_742027.1| endonuclease/exonuclease/phosphatase [Alkalilimnicola ehrlichii
           MLHE-1]
 gi|114226738|gb|ABI56537.1| Endonuclease/exonuclease/phosphatase [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 575

 Score = 42.9 bits (99), Expect = 0.057,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 25/83 (30%), Gaps = 26/83 (31%)

Query: 198 THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR-----------IDTKPR 246
                  Y++       +    G  +DH +  P     + +A            ++   R
Sbjct: 498 HLPPERRYTY------VFRGESGY-LDHALAPPRLADRVQAAGTWAINADEPRLLEYDAR 550

Query: 247 GWTK--------PSDHTPVIVSL 261
           G  +         SDH PV V L
Sbjct: 551 GIERRFRPGPWRSSDHDPVWVDL 573


>gi|156374238|ref|XP_001629715.1| predicted protein [Nematostella vectensis]
 gi|156216721|gb|EDO37652.1| predicted protein [Nematostella vectensis]
          Length = 304

 Score = 42.9 bits (99), Expect = 0.057,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 32/79 (40%), Gaps = 14/79 (17%)

Query: 186 LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN--KGIRIDHIMLSPEATSLLHSARIDT 243
           +Q     D  R  +     Y++         K      R+D  ++S     ++ SA+I T
Sbjct: 184 MQENDLIDIWRVRNPDSKRYTW-------RQKKQLVQRRLDFWLISNFLQDVIESAKIKT 236

Query: 244 KPRGWTKPSDHTPVIVSLD 262
             +      DH+ +++S+D
Sbjct: 237 AIQT-----DHSAILLSID 250


>gi|194365350|ref|YP_002027960.1| endonuclease/exonuclease/phosphatase [Stenotrophomonas maltophilia
           R551-3]
 gi|194348154|gb|ACF51277.1| Endonuclease/exonuclease/phosphatase [Stenotrophomonas maltophilia
           R551-3]
          Length = 284

 Score = 42.9 bits (99), Expect = 0.057,   Method: Composition-based stats.
 Identities = 34/275 (12%), Positives = 74/275 (26%), Gaps = 34/275 (12%)

Query: 4   VTVATWNVNSIRA------------RIHNLAAWIKENNPDIICLQE-TKTEDKNFPFETL 50
           + V ++NV   R             R   +   I + +P +I  QE  K +      E L
Sbjct: 30  LKVMSFNV---RTPADTEPGKRWPDRRDAMVKVILDAHPAVIGTQELVKEQADYL-SEHL 85

Query: 51  QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
               +  E     S +    +     +  +       L        +    N     +  
Sbjct: 86  PGYRWFGEGRRGGSGDEHMGVFYDSKVLTIEESGNFWLSDTPDVPGSISWGNLYPRMVTW 145

Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170
                 +      +           R   +   ++   +       +P          + 
Sbjct: 146 AVFRRLDDDRRFYF----MDTHLPYRDEDEPRRVKGAELIGKRLASLPADLPVVLTGDFN 201

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230
                +     +++    +      +         +F D+   + S+     +D +++  
Sbjct: 202 -----SEPGGDTYKAFSRVLQDTRPQVKAPQGPRLTFHDFTGKATSQ-----LDWVLVRG 251

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
                  S   D +      PSDH P++V LD P 
Sbjct: 252 F---HARSFLTDDRRIDGVLPSDHFPLVVELDWPA 283


>gi|109390622|emb|CAJ13338.1| pol protein [Drosophila melanogaster]
          Length = 1103

 Score = 42.9 bits (99), Expect = 0.057,   Method: Composition-based stats.
 Identities = 39/274 (14%), Positives = 75/274 (27%), Gaps = 31/274 (11%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + +  WN   I  + + L A+IK+    I+ + ET+ E        L    +H     
Sbjct: 12  NTLKIGYWNSCGITNKTNELEAYIKKEGIQIMLVTETRLERN---SNALNIKGFHTYLAQ 68

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
             + +     +      I           +  F+++       + RI             
Sbjct: 69  NPTSHRKGGTATIVSQNIRHACLNPI---ETDFMQSAPIALIPSSRIRADMTIVAPIYCP 125

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
             Y        +        L+ +   I  GD+N   +    Y           ++  R+
Sbjct: 126 PVYKWTTEQFSKLFNHFEMLLDGKSKFILGGDWNCKHRLWGNYLSCARGRSLSQSILARK 185

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
               +     T                              +D  +     T  L +   
Sbjct: 186 DLDIVATGHATHFPFDKKKQPSA------------------LDFAICKGFHTQKLKTYST 227

Query: 242 DTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTS 275
           D         SDH P+ + LD P+    Q + T+
Sbjct: 228 D------ELSSDHLPIQIVLD-PDDSDWQHNKTN 254


>gi|48596582|emb|CAD65869.1| pol protein [Drosophila melanogaster]
          Length = 1103

 Score = 42.9 bits (99), Expect = 0.057,   Method: Composition-based stats.
 Identities = 39/274 (14%), Positives = 75/274 (27%), Gaps = 31/274 (11%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + +  WN   I  + + L A+IK+    I+ + ET+ E        L    +H     
Sbjct: 12  NTLKIGYWNSCGITNKTNELEAYIKKEGIQIMLVTETRLERN---SNALNIKGFHTYLAQ 68

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
             + +     +      I           +  F+++       + RI             
Sbjct: 69  NPTSHRKGGTATIVSQNIRHACLNPI---ETDFMQSAPIALIPSSRIRADMTIVAPIYCP 125

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
             Y        +        L+ +   I  GD+N   +    Y           ++  R+
Sbjct: 126 PVYKWTTEQFSKLFNHFEMLLDGKSKFILGGDWNCKHRLWGNYLSCARGRSLSQSILARK 185

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
               +     T                              +D  +     T  L +   
Sbjct: 186 DLDIVATGHATHFPFDKKKQPSA------------------LDFAICKGFHTQKLKTYST 227

Query: 242 DTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTS 275
           D         SDH P+ + LD P+    Q + T+
Sbjct: 228 D------ELSSDHLPIQIVLD-PDDSDWQHNKTN 254


>gi|254513404|ref|ZP_05125469.1| alkaline phosphatase [Rhodobacteraceae bacterium KLH11]
 gi|221532408|gb|EEE35404.1| alkaline phosphatase [Rhodobacteraceae bacterium KLH11]
          Length = 2116

 Score = 42.9 bits (99), Expect = 0.058,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 19/48 (39%)

Query: 223  IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQ 270
            +DHI ++       +   +          SDH P++ S  +  P + Q
Sbjct: 1900 LDHIFVTDSLLEGANVDFVHVNVDFADSASDHEPIVASFTLEAPAEDQ 1947


>gi|163760748|ref|ZP_02167828.1| Endonuclease/exonuclease/phosphatase family protein [Hoeflea
           phototrophica DFL-43]
 gi|162282070|gb|EDQ32361.1| Endonuclease/exonuclease/phosphatase family protein [Hoeflea
           phototrophica DFL-43]
          Length = 368

 Score = 42.9 bits (99), Expect = 0.058,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 30/79 (37%), Gaps = 22/79 (27%)

Query: 207 FWDYYADSWSKNKGIRIDHIMLSPEA----TSLLHSA---------------RIDTKPR- 246
           +  Y+     +    ++D+++ SP         L                   ++  PR 
Sbjct: 289 WTLYHTRGPQERHLCQLDYLLASPALTRSNRDRLPDIIRAGQPWRTLFPQGQEVERYPRT 348

Query: 247 GWTKP--SDHTPVIVSLDI 263
           GW +P  SDH PV ++ D+
Sbjct: 349 GWDRPKASDHCPVAMTFDM 367



 Score = 38.6 bits (88), Expect = 0.94,   Method: Composition-based stats.
 Identities = 10/31 (32%), Positives = 13/31 (41%), Gaps = 4/31 (12%)

Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNY 55
          I E + DI+CLQE     +N          Y
Sbjct: 66 IAEADADILCLQEV----ENLDTLHRFEYGY 92


>gi|71002678|ref|XP_756020.1| endonuclease/exonuclease/phosphatase family protein [Aspergillus
           fumigatus Af293]
 gi|66853658|gb|EAL93982.1| endonuclease/exonuclease/phosphatase family protein [Aspergillus
           fumigatus Af293]
 gi|159130073|gb|EDP55187.1| endonuclease/exonuclease/phosphatase family protein [Aspergillus
           fumigatus A1163]
          Length = 300

 Score = 42.9 bits (99), Expect = 0.058,   Method: Composition-based stats.
 Identities = 30/259 (11%), Positives = 67/259 (25%), Gaps = 27/259 (10%)

Query: 26  KENNPDIICLQET------------KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSK 73
           +  +   ICLQE             K      P    ++  +     G+   +     S 
Sbjct: 46  RNQDA-FICLQEVLHNQLVDVLSGLKQPPSTIPKSASETQQWEYIGVGRDDGHKAGEYSP 104

Query: 74  YQPIEIVTHLPGDDLDVQARFIEATFTINT----QTLRIGNLYLPHGNPITSTKYDDKIS 129
                 V  L   +    +               + L IG                    
Sbjct: 105 IFYQPSVWQLCHWESVWLSETPNKPSKGWDAASIRILTIGVFTHNITRHTVLVMNTHLDD 164

Query: 130 WIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNM 189
              +    A++ +  +     +G +  +            +        +  S   L + 
Sbjct: 165 QGSQSRFEAAKIILQKIDEYRSGKFGTLIAGVFLAGDFNSQETQEAYNVLTGSESSLVDT 224

Query: 190 GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE---ATSLLHSARIDTKPR 246
                    +  ++ ++ + Y  +  +     RID+I++ P      S + +       R
Sbjct: 225 AKVVEPSQHYGNYYTWTGFGYEGEDPT-----RIDYILIGPGKNKLGSWIVNGYAVLANR 279

Query: 247 --GWTKPSDHTPVIVSLDI 263
                  SDH  V+  + +
Sbjct: 280 FDSGVFLSDHRAVVADITL 298


>gi|289668451|ref|ZP_06489526.1| hypothetical protein XcampmN_08130 [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 245

 Score = 42.9 bits (99), Expect = 0.059,   Method: Composition-based stats.
 Identities = 15/95 (15%), Positives = 30/95 (31%), Gaps = 14/95 (14%)

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
             +A    +      + +        R    +  +++F  +  D         IDHI++S
Sbjct: 160 HPNAMLMGDFNCMADRPEMQSLYRHTRLQPPSCEVHTFPSWRPD-------RAIDHILVS 212

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
                      I+         SDH  V + + +P
Sbjct: 213 DSLV-------IEHTEAIPAAFSDHLAVGMDIRVP 240


>gi|289662605|ref|ZP_06484186.1| hypothetical protein XcampvN_05822 [Xanthomonas campestris pv.
           vasculorum NCPPB702]
          Length = 255

 Score = 42.9 bits (99), Expect = 0.059,   Method: Composition-based stats.
 Identities = 15/95 (15%), Positives = 30/95 (31%), Gaps = 14/95 (14%)

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
             +A    +      + +        R    +  +++F  +  D         IDHI++S
Sbjct: 170 HPNAMLMGDFNCMADRPEMQSLYRHTRLQPPSCEVHTFPSWRPD-------RAIDHILVS 222

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
                      I+         SDH  V + + +P
Sbjct: 223 DSLV-------IEHTEAIPAAFSDHLAVGMDIRVP 250


>gi|167719260|ref|ZP_02402496.1| endonuclease/exonuclease/phosphatase family superfamily protein
           [Burkholderia pseudomallei DM98]
          Length = 107

 Score = 42.9 bits (99), Expect = 0.059,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 4/38 (10%)

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           D   ++      L    ID    G  + SDH P+++ L
Sbjct: 71  DFAFVTDTLVRRLSRCEID----GTVRASDHQPIVLEL 104


>gi|92115234|ref|YP_575162.1| endonuclease/exonuclease/phosphatase [Chromohalobacter salexigens
           DSM 3043]
 gi|91798324|gb|ABE60463.1| Endonuclease/exonuclease/phosphatase [Chromohalobacter salexigens
           DSM 3043]
          Length = 271

 Score = 42.9 bits (99), Expect = 0.059,   Method: Composition-based stats.
 Identities = 33/255 (12%), Positives = 70/255 (27%), Gaps = 44/255 (17%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQP 76
           R+  +   ++  + DI+ LQE   +  +F    +  + Y  +  G   +      +  + 
Sbjct: 52  RLDLIGDTLR--DYDIVGLQEV--DGGSFRSGHVNQVEYLAKRGGFPHHYQQLNRNLGRV 107

Query: 77  IEIVTHLPGDDLDVQARFIEATFTINTQT-LRIGNLYLPHGNPITSTKYDDKISWIKRFL 135
            +    L       Q        T+  +  +       P    +             R L
Sbjct: 108 AQHSNGLLSRLTPRQVDEYRLPGTLPGRGAIHARFGEGPDALHLVVAHLALGHRTRTRQL 167

Query: 136 RFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAI 195
            + S+ ++    ++  GD N  P   + +                               
Sbjct: 168 DYLSEIIQPLRHVVVMGDLNCTPDQINAHQRFCH-------------------------A 202

Query: 196 RATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHT 255
              H      S+  +            +DHI++S           +          SDH 
Sbjct: 203 LPLHPVAMPLSYPAWQPR-------RALDHILISSAL--HAERFEVLD-----RLFSDHL 248

Query: 256 PVIVSLDIPEPRKKQ 270
           PV V + +P   ++ 
Sbjct: 249 PVAVDIQLPAACQRS 263


>gi|58583508|ref|YP_202524.1| hypothetical protein XOO3885 [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|188575228|ref|YP_001912157.1| endonuclease/exonuclease/phosphatase [Xanthomonas oryzae pv. oryzae
           PXO99A]
 gi|58428102|gb|AAW77139.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|188519680|gb|ACD57625.1| endonuclease/exonuclease/phosphatase [Xanthomonas oryzae pv. oryzae
           PXO99A]
          Length = 255

 Score = 42.9 bits (99), Expect = 0.059,   Method: Composition-based stats.
 Identities = 15/95 (15%), Positives = 30/95 (31%), Gaps = 14/95 (14%)

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
             +A    +      + +        R    +  +++F  +  D         IDHI++S
Sbjct: 170 HPNAMLMGDFNCMADRPEMQSLYRHTRLQPPSCEVHTFPSWRPD-------RAIDHILVS 222

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
                      I+         SDH  V + + +P
Sbjct: 223 DSLV-------IEHTEAIPAAFSDHLAVGMDIRVP 250


>gi|84625324|ref|YP_452696.1| hypothetical protein XOO_3667 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|84369264|dbj|BAE70422.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 245

 Score = 42.9 bits (99), Expect = 0.059,   Method: Composition-based stats.
 Identities = 15/95 (15%), Positives = 30/95 (31%), Gaps = 14/95 (14%)

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
             +A    +      + +        R    +  +++F  +  D         IDHI++S
Sbjct: 160 HPNAMLMGDFNCMADRPEMQSLYRHTRLQPPSCEVHTFPSWRPD-------RAIDHILVS 212

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
                      I+         SDH  V + + +P
Sbjct: 213 DSLV-------IEHTEAIPAAFSDHLAVGMDIRVP 240


>gi|78046333|ref|YP_362508.1| hypothetical protein XCV0777 [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|325928431|ref|ZP_08189622.1| metal-dependent hydrolase [Xanthomonas perforans 91-118]
 gi|78034763|emb|CAJ22408.1| conserved hypothetical protein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|325541148|gb|EGD12699.1| metal-dependent hydrolase [Xanthomonas perforans 91-118]
          Length = 255

 Score = 42.9 bits (99), Expect = 0.059,   Method: Composition-based stats.
 Identities = 15/95 (15%), Positives = 30/95 (31%), Gaps = 14/95 (14%)

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
             +A    +      + +        R    +  +++F  +  D         IDHI++S
Sbjct: 170 HPNAMLMGDFNCMADRPEMQSLYRHTRLQPPSCEVHTFPSWRPD-------RAIDHILVS 222

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
                      I+         SDH  V + + +P
Sbjct: 223 DSLV-------IEHTEAIPAAFSDHLAVGMDIRVP 250


>gi|317478482|ref|ZP_07937642.1| endonuclease/Exonuclease/phosphatase [Bacteroides sp. 4_1_36]
 gi|316905371|gb|EFV27165.1| endonuclease/Exonuclease/phosphatase [Bacteroides sp. 4_1_36]
          Length = 287

 Score = 42.9 bits (99), Expect = 0.059,   Method: Composition-based stats.
 Identities = 30/269 (11%), Positives = 75/269 (27%), Gaps = 30/269 (11%)

Query: 6   VATWNV---------NSIRARIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQS--L 53
           V T+NV         N+   R  +    I   +PD++ +QE    + ++      Q   L
Sbjct: 33  VMTFNVRLDIPSDSVNNWNYRKGDACRMIAYYSPDLLGMQEVLHNQMEDLKRGLPQYTAL 92

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
               +   +            +   +         +         +  +   +    +  
Sbjct: 93  GVGRDDGKEAGEYCPIFFRTDRFTLVEYGNFSL-SEQPETIGIKGWDASYNRVTTWAILQ 151

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
              N      ++  +    +  R    +L L++    A D                 N  
Sbjct: 152 EKNNGQKFVYFNTHLDNDGKTARKEGVQLILDKIKEIAPDM--------PAIITGDFNCT 203

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW-SKNKGIRIDHIMLSPEA 232
                ++   +         A      +      W ++        + + +D++ ++   
Sbjct: 204 PGEEPLQTLEKGGMENAAKTAAVTYGPS------WSFHDFGRLPVEERVLLDYVFVTKG- 256

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
            + +   R+       +  SDH P++V L
Sbjct: 257 -AKIDRYRVIQDKPENSYLSDHCPILVEL 284


>gi|330957166|gb|EGH57426.1| endonuclease/exonuclease/phosphatase family protein [Pseudomonas
           syringae pv. maculicola str. ES4326]
          Length = 291

 Score = 42.9 bits (99), Expect = 0.060,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 14/61 (22%)

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           +F  +            +DHI+LSP  T  L   ++  +P      SDH PV V + +P 
Sbjct: 230 TFPSWRPK-------RCLDHILLSPTLT--LERVQVLAQP-----ISDHLPVAVEIRLPA 275

Query: 266 P 266
            
Sbjct: 276 S 276


>gi|322696490|gb|EFY88281.1| Endonuclease/Exonuclease/phosphatase family protein [Metarhizium
           acridum CQMa 102]
          Length = 325

 Score = 42.9 bits (99), Expect = 0.060,   Method: Composition-based stats.
 Identities = 32/291 (10%), Positives = 71/291 (24%), Gaps = 41/291 (14%)

Query: 2   SVV--TVATWNVNSIRARIHNLAAWIKENNPDI--------------------ICLQE-T 38
           + +   + ++N   IR   +     + E   D+                    +CLQE  
Sbjct: 45  ATMPVRLISFN---IRYAANEDERALAEQPWDVRCPKVCSQMRFITAGHESPFVCLQESL 101

Query: 39  KTEDKNFPFETLQSLNYHIETCGQKSYNGVAI----LSKYQPIEIVTHLPGDDLDVQARF 94
            ++  +   E  +           +           +                L      
Sbjct: 102 YSQLNDIQAELGEPW---AHIGRGREEGETDGEFSPIFYRSDAWACELSETRWLSKTPEK 158

Query: 95  IEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDY 154
               +      +    L+    N             I    R  S +L ++    ++   
Sbjct: 159 PSRGWDAALNRIVTIGLFSHRANGTKVVVMSTHFDHIGVEARKNSAKLLIKFANEWSHGK 218

Query: 155 NIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY-SFWDYYAD 213
            + P      + ++   D     +                I         Y +   Y + 
Sbjct: 219 GVPP------SVVLIGGDFNSEPDDEAYQMMTAPGSGMSDISGLVPERGHYGNHLTYTSF 272

Query: 214 SWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT-KPSDHTPVIVSLDI 263
                   RID + +    T+ + +  +         + SDH P++  L I
Sbjct: 273 GEPNEHPQRIDFLFIQEPRTAQVETFGVLANSFDDQIRFSDHRPIVSDLQI 323


>gi|147858056|emb|CAN82510.1| hypothetical protein VITISV_012726 [Vitis vinifera]
          Length = 1308

 Score = 42.9 bits (99), Expect = 0.060,   Method: Composition-based stats.
 Identities = 22/238 (9%), Positives = 54/238 (22%), Gaps = 28/238 (11%)

Query: 18  IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPI 77
              + +  ++   D+ C+QETK +                        + V         
Sbjct: 501 RKVIKSVFRKQKVDLFCIQETKIQ---------------------IMTDRVVRSLGTGRF 539

Query: 78  EIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF 137
                L    +            +      +G   L               + +      
Sbjct: 540 LDWKVLNACGMAGGILICWDKRALELLEWEVGQFSLSCRFRTMENGVIWAFTGVYGPFTR 599

Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA 197
             +    EE     G +         +N  + + +      +  + ++   +     +  
Sbjct: 600 LEREWLWEEVGAIRGIWEGPWCLGGDFNITLAQGERSRQGRITSAMRRFAEVVDDLGLVD 659

Query: 198 THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK--PSD 253
                  +++        +     R+D  ++SP                G     PSD
Sbjct: 660 LQLQRGAFTW----TGGLNNMSRARLDRFLVSPCWLDQFSR-FYLRGVVGREGLPPSD 712


>gi|21220603|ref|NP_626382.1| hypothetical protein SCO2125 [Streptomyces coelicolor A3(2)]
 gi|256788258|ref|ZP_05526689.1| hypothetical protein SlivT_27549 [Streptomyces lividans TK24]
 gi|289772150|ref|ZP_06531528.1| conserved hypothetical protein [Streptomyces lividans TK24]
 gi|5689935|emb|CAB51973.1| hypothetical protein [Streptomyces coelicolor A3(2)]
 gi|289702349|gb|EFD69778.1| conserved hypothetical protein [Streptomyces lividans TK24]
          Length = 253

 Score = 42.9 bits (99), Expect = 0.060,   Method: Composition-based stats.
 Identities = 14/36 (38%), Positives = 22/36 (61%)

Query: 2  SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQE 37
          +V+ V ++N+ S+R     LA  IK   PD++ LQE
Sbjct: 19 AVIRVLSYNIRSLRDDTDALARVIKACAPDLVLLQE 54


>gi|323530343|ref|YP_004232495.1| endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1001]
 gi|323387345|gb|ADX59435.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1001]
          Length = 258

 Score = 42.5 bits (98), Expect = 0.060,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 19/41 (46%), Gaps = 7/41 (17%)

Query: 4  VTVATWNV------NSIRARIHNLAAWIKENNPDIICLQET 38
          + + T+N+      +  R+    +A  I   N D++ LQE 
Sbjct: 34 LRIVTYNIHGAVGTDGRRSAA-RIAEVITALNADVVALQEV 73


>gi|48596584|emb|CAD65871.1| pol protein [Drosophila melanogaster]
          Length = 1103

 Score = 42.5 bits (98), Expect = 0.060,   Method: Composition-based stats.
 Identities = 39/274 (14%), Positives = 75/274 (27%), Gaps = 31/274 (11%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + + +  WN   I  + + L A+IK+    I+ + ET+ E        L    +H     
Sbjct: 12  NTLKIGYWNSCGITNKTNELEAYIKKEGIQIMLVTETRLERN---SNALNIKGFHTYLAQ 68

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
             + +     +      I           +  F+++       + RI             
Sbjct: 69  NPTSHRKGGTATIVSQNIRHACLNPI---ETDFMQSAPIALIPSSRIRADMTIVAPIYCP 125

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
             Y        +        L+ +   I  GD+N   +    Y           ++  R+
Sbjct: 126 PVYKWTTEQFSKLFNHFEMLLDGKSKFILGGDWNCKHRLWGNYLSCARGRSLSQSILARK 185

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
               +     T                              +D  +     T  L +   
Sbjct: 186 DLDIVATGHATHFPFDKKKQPSA------------------LDFAICKGFHTQKLKTYST 227

Query: 242 DTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTS 275
           D         SDH P+ + LD P+    Q + T+
Sbjct: 228 D------ELSSDHLPIQIVLD-PDDSDWQHNKTN 254


>gi|254563662|ref|YP_003070757.1| endonuclease/exonuclease/phosphatase [Methylobacterium extorquens
           DM4]
 gi|254270940|emb|CAX26945.1| putative endonuclease/exonuclease/phosphatase [Methylobacterium
           extorquens DM4]
          Length = 275

 Score = 42.5 bits (98), Expect = 0.061,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 3/43 (6%)

Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +R+DH+ +S      +    +   P    K SDH PV+  + I
Sbjct: 233 LRVDHVFVSERVA--VERIAVVDTPLAR-KASDHLPVLAEIRI 272



 Score = 42.1 bits (97), Expect = 0.094,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 7/41 (17%)

Query: 4  VTVATWNV------NSIRARIHNLAAWIKENNPDIICLQET 38
          + + T+NV      +  R     +A  I    PDI+ LQE 
Sbjct: 29 LRLLTYNVRHCRGTDG-RVAPERVARVIAALAPDIVALQEV 68


>gi|240141150|ref|YP_002965630.1| putative endonuclease/exonuclease/phosphatase [Methylobacterium
           extorquens AM1]
 gi|240011127|gb|ACS42353.1| putative endonuclease/exonuclease/phosphatase [Methylobacterium
           extorquens AM1]
          Length = 275

 Score = 42.5 bits (98), Expect = 0.061,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 3/43 (6%)

Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +R+DH+ +S      +    +   P    K SDH PV+  + I
Sbjct: 233 LRVDHVFVSERVA--VERIAVVDTPLAR-KASDHLPVLAEIRI 272



 Score = 42.1 bits (97), Expect = 0.094,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 7/41 (17%)

Query: 4  VTVATWNV------NSIRARIHNLAAWIKENNPDIICLQET 38
          + + T+NV      +  R     +A  I    PDI+ LQE 
Sbjct: 29 LRLLTYNVRHCRGTDG-RVAPERVARVIAALAPDIVALQEV 68


>gi|222624956|gb|EEE59088.1| hypothetical protein OsJ_10924 [Oryza sativa Japonica Group]
          Length = 392

 Score = 42.5 bits (98), Expect = 0.061,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 75/251 (29%), Gaps = 16/251 (6%)

Query: 16  ARIHNLAAWIKENNPDIICLQETKTEDKN---FPFETLQSLNY-HIETCGQKSYNGVAIL 71
           AR  ++A  ++E   D++ LQ  + E+        E  + L   ++         G A+L
Sbjct: 114 ARRRSVAEALREAGADMVALQNVRAEEGRGMRPLSELAEGLGMRYVFAESWAPEYGNAVL 173

Query: 72  SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWI 131
           S++           D  D +              + +   +L H +     K  D I   
Sbjct: 174 SRWPIKRWNARRLADHFDFRNVMRATIEVPGAGEVNLYCTHLDHLDEGLRMKQVDSILRF 233

Query: 132 KRFLRFASQR--LELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNM 189
                         L+     A  +  I + H+       +++    L+ ++        
Sbjct: 234 ADGHHHILAGGLNALDASDYSADRWAAIAKYHEEIGKPPPKSEVMRHLKAKRYVDAKDFA 293

Query: 190 GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT 249
           G  DA              D          G R+D+I+ SP +                 
Sbjct: 294 GGRDAGLVVVPNGQ-----DVQGTCK---YGTRVDYILASPNSPYNFVPGS--YAVVPSM 343

Query: 250 KPSDHTPVIVS 260
             SDH  V+V 
Sbjct: 344 GTSDHHIVMVD 354


>gi|221101359|ref|XP_002169156.1| PREDICTED: similar to pol-like protein [Hydra magnipapillata]
          Length = 1476

 Score = 42.5 bits (98), Expect = 0.061,   Method: Composition-based stats.
 Identities = 30/242 (12%), Positives = 63/242 (26%), Gaps = 23/242 (9%)

Query: 1   MSVVTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           M  +   T NVN +   +++  L         D+  +QET   +KN              
Sbjct: 1   MERLKFYTSNVNGLNNGSKLKTLINNFINKPYDVFLIQETHLNNKNINLLKNVWEGDVFY 60

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
           +    S+     +      +       D              I+   + I        + 
Sbjct: 61  SPSDTSFTRGTAILFKLNFDKPLLSGNDLKGSYNYVAIKFIGIDYLIINIYAPSGVGTSQ 120

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
                           +     +      ++  GD+N+     D Y  +           
Sbjct: 121 KLRVNL------FNELINEFKNKDLNNFQIVMGGDFNMTLSNKDRYPTLFK----SECPS 170

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG---IRIDHIMLSPEATSL 235
            +     L  +   D  R  +     Y+        ++ + G    RID   +S ++   
Sbjct: 171 CKTLKTLLNLLEIEDTWRVFNPYKQEYT--------FAASNGVSQSRIDRFYISKKSRQN 222

Query: 236 LH 237
           + 
Sbjct: 223 IK 224


>gi|218532583|ref|YP_002423399.1| endonuclease/exonuclease/phosphatase [Methylobacterium
           chloromethanicum CM4]
 gi|218524886|gb|ACK85471.1| Endonuclease/exonuclease/phosphatase [Methylobacterium
           chloromethanicum CM4]
          Length = 328

 Score = 42.5 bits (98), Expect = 0.061,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 3/43 (6%)

Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +R+DH+ +S      +    +   P    K SDH PV+  + I
Sbjct: 286 LRVDHVFVSERVA--VERIAVVDTPLAR-KASDHLPVLAEIRI 325



 Score = 42.1 bits (97), Expect = 0.097,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 7/41 (17%)

Query: 4   VTVATWNV------NSIRARIHNLAAWIKENNPDIICLQET 38
           + + T+NV      +  R     +A  I +  PDI+ LQE 
Sbjct: 82  LRLLTYNVRHCRGTDG-RVAPERVARVIADLAPDIVALQEV 121


>gi|163853725|ref|YP_001641768.1| endonuclease/exonuclease/phosphatase [Methylobacterium extorquens
           PA1]
 gi|163665330|gb|ABY32697.1| Endonuclease/exonuclease/phosphatase [Methylobacterium extorquens
           PA1]
          Length = 328

 Score = 42.5 bits (98), Expect = 0.061,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 3/43 (6%)

Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +R+DH+ +S      +    +   P    K SDH PV+  + I
Sbjct: 286 LRVDHVFVSERVA--VERIAVVDTPLAR-KASDHLPVLAEIRI 325



 Score = 42.1 bits (97), Expect = 0.094,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 7/41 (17%)

Query: 4   VTVATWNV------NSIRARIHNLAAWIKENNPDIICLQET 38
           + + T+NV      +  R     +A  I    PDI+ LQE 
Sbjct: 82  LRLLTYNVRHCRGTDG-RVAPERVARVIAALAPDIVALQEV 121


>gi|237740410|ref|ZP_04570891.1| predicted protein [Fusobacterium sp. 2_1_31]
 gi|229422427|gb|EEO37474.1| predicted protein [Fusobacterium sp. 2_1_31]
          Length = 261

 Score = 42.5 bits (98), Expect = 0.061,   Method: Composition-based stats.
 Identities = 37/277 (13%), Positives = 79/277 (28%), Gaps = 33/277 (11%)

Query: 4   VTVATWNVNSIRARIHN---LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           +    WN+N    R      +    +EN+ DI+ + E   ++ N     + SL+Y   + 
Sbjct: 1   MKFLFWNIN----RKDLSNTIIEICQENDIDILGVCE--GQNLNI-KNLIGSLDYEEISV 53

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
                +    L   + I I+ +    D   +   I  +       + + +      N  +
Sbjct: 54  IHNLEDNGIKLFCRENISIIANEENTDYHKEYTLILESIKYKLFLVHLPSKLHLTENEQS 113

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
                 + +              +                      +  +          
Sbjct: 114 LLVPRFECTKQAMQRTLIFGDFNMNPFENGIISSETFHALSSKEITLKKKRRVNKKE--- 170

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR-IDHIMLSPEATSLLH-- 237
                  N  +    R  ++    Y    YY  S   N      D +++SP+  ++    
Sbjct: 171 --RYFFYNPTWFLYARKHNEIIGSY----YYNKSSPNNLFWNMFDQVIISPDLINVFEFN 224

Query: 238 SARIDTKPR-----------GWTKPSDHTPVIVSLDI 263
             +I T  +              + SDH P++  L+I
Sbjct: 225 KFKIITDTKQKNLLYEDKTPNKKRYSDHLPILFELNI 261


>gi|238576283|ref|XP_002387981.1| hypothetical protein MPER_13062 [Moniliophthora perniciosa FA553]
 gi|215448887|gb|EEB88911.1| hypothetical protein MPER_13062 [Moniliophthora perniciosa FA553]
          Length = 36

 Score = 42.5 bits (98), Expect = 0.061,   Method: Composition-based stats.
 Identities = 8/35 (22%), Positives = 14/35 (40%), Gaps = 3/35 (8%)

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
           LS      +    I ++  G    SDH P+ +  +
Sbjct: 2   LSKRVVEKVKMCEIRSEIYG---ASDHCPLTMEYE 33


>gi|299142905|ref|ZP_07036032.1| endonuclease/Exonuclease/phosphatase [Prevotella oris C735]
 gi|298575634|gb|EFI47513.1| endonuclease/Exonuclease/phosphatase [Prevotella oris C735]
          Length = 313

 Score = 42.5 bits (98), Expect = 0.062,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 22/61 (36%), Gaps = 21/61 (34%)

Query: 223 IDHIMLSPEATSLLHSARI--------DTKPRGWTKP-------------SDHTPVIVSL 261
           +DH++ S     L  S  I        D +  G  +P             SDH P++V  
Sbjct: 252 LDHVLCSEALVPLFRSCTIADFPFLLTDDEVYGGLQPLRNFHGAKYLNGFSDHLPLVVKF 311

Query: 262 D 262
           D
Sbjct: 312 D 312


>gi|298373566|ref|ZP_06983555.1| endonuclease/exonuclease/phosphatase family protein [Bacteroidetes
           oral taxon 274 str. F0058]
 gi|298274618|gb|EFI16170.1| endonuclease/exonuclease/phosphatase family protein [Bacteroidetes
           oral taxon 274 str. F0058]
          Length = 317

 Score = 42.5 bits (98), Expect = 0.062,   Method: Composition-based stats.
 Identities = 29/261 (11%), Positives = 68/261 (26%), Gaps = 26/261 (9%)

Query: 3   VVTVATWNVNS-IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++ +  WN     R +  ++        PDI+ + E   E ++       +   +     
Sbjct: 1   MIRIIEWNCQGAFRLKNRHILDLC----PDILIVAE--CEKEHILQFGKLTPPPNDFIWY 54

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
             S  G+AI S              +              +     +          ++ 
Sbjct: 55  GDSNKGIAIFSYSGFKLQRLKEFNPNFRYIIPIEVYDDARSFMLFAVWAKDDRRNPLVSY 114

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
                      + +   +  L  +                        E     +  V  
Sbjct: 115 IGQVWGAINYYQTILQENSILMGDFN--------------SNRIWDGKERIGNHSDVVCF 160

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             +      +            L +F+ +   S   +    ID++  S   T   ++   
Sbjct: 161 LKRFGIESLYHKQHNEEQGQEKLKTFFMHRNISKPYH----IDYVFASDRITRNGYNLT- 215

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
              P+ W   SDH P+++ ++
Sbjct: 216 LGTPQNWIDKSDHIPLMLDIN 236


>gi|255713086|ref|XP_002552825.1| KLTH0D02310p [Lachancea thermotolerans]
 gi|238934205|emb|CAR22387.1| KLTH0D02310p [Lachancea thermotolerans]
          Length = 739

 Score = 42.5 bits (98), Expect = 0.062,   Method: Composition-based stats.
 Identities = 37/295 (12%), Positives = 71/295 (24%), Gaps = 53/295 (17%)

Query: 17  RIHNLAAWIKENNPDIICLQETKT-EDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75
           R   L   I   N DI+CLQE +    ++F    L+   Y      +     +      +
Sbjct: 439 RREKLKEQILSYNTDIVCLQEVECKTYEDFWAPLLREKGYSGIFHTKTRARTMHSKDSKK 498

Query: 76  PIEIVT--------------------HLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
                                      +          ++      +   L +   ++  
Sbjct: 499 VDGCCFFYKDSEFKLMFKEAVDFSSVWMKHKKFQRTEDYLNRAMNKDNVALVVKLQHIKS 558

Query: 116 GNPITSTK--------------------YDDKISWIKRFLRFASQRLELEEPLIFAGDYN 155
           G  + +                       D     IK      + +   + P++  GD+N
Sbjct: 559 GEHVWAATTHLHWDPQFNDVKTFQVGVLLDYMEKVIKEQNNCNNTQELKKVPVVICGDFN 618

Query: 156 IIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW 215
                                +E R      Q     +    +         +     ++
Sbjct: 619 SQTNSAVYELLNTGNVSKHRDIEGRDFGYMSQKNYAHNLPLKSSYDSIGELPFTNLTPTF 678

Query: 216 SKNKGIRIDHIM-LSPEATSLLHSARIDTKPRGW-------TKPSDHTPVIVSLD 262
           +      ID+I   S           ID +             PSDH P+I   +
Sbjct: 679 TDV----IDYIWYSSQGLRVRGLLGEIDPEYASKFIGFPNDKFPSDHIPLITRFE 729


>gi|147789894|emb|CAN76132.1| hypothetical protein VITISV_022809 [Vitis vinifera]
          Length = 2404

 Score = 42.5 bits (98), Expect = 0.063,   Method: Composition-based stats.
 Identities = 22/168 (13%), Positives = 52/168 (30%), Gaps = 7/168 (4%)

Query: 93   RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG 152
                       + + +G   +          +    S +        + L  EE     G
Sbjct: 1230 FVFWDKRVXELEGMEVGLFSISCRFKNCEDGFSWIFSGVYGPTLKRYKELFWEELGAIRG 1289

Query: 153  DYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYA 212
             ++        +N I + N++     +  S ++   +     +R        +++    +
Sbjct: 1290 LWSDPWCIRGDFNLIRFPNESRRGGRLSSSMRRFSEVIDDLDLRDLPLQGGPFTW----S 1345

Query: 213  DSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
               +     R+D  ++S +       A   T PR     SDH P+++ 
Sbjct: 1346 GGLNNQAMSRLDRFLVSKDWEGHFKGAVQCTLPR---PVSDHFPILLD 1390


>gi|39995817|ref|NP_951768.1| endonuclease/exonuclease/phosphatase family protein [Geobacter
           sulfurreducens PCA]
 gi|39982581|gb|AAR34041.1| endonuclease/exonuclease/phosphatase family protein [Geobacter
           sulfurreducens PCA]
          Length = 335

 Score = 42.5 bits (98), Expect = 0.063,   Method: Composition-based stats.
 Identities = 44/332 (13%), Positives = 78/332 (23%), Gaps = 78/332 (23%)

Query: 1   MSVVTVATWNVNSI------------RARIHNLAAWIKENNPDIICLQE----------- 37
           M  V + +WNV  +            R R   +   I+E  PDI+CL E           
Sbjct: 1   MGTVKITSWNVAHLERLTRAHPTAKERRRRDAVVREIRELAPDILCLLEGPAGEAGIDLV 60

Query: 38  -----------TKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGD 86
                       K  D N+        +  I    ++     A L      +    +   
Sbjct: 61  ANDLLDGEWVAVKAADGNYATRG----DQWIWFLVRQDLAARASLLPVGTWDAFAGVSWT 116

Query: 87  DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELE- 145
                              + I +        I        I+  +R  R   +R   E 
Sbjct: 117 CHLWGEFTEGTHRHYRHPQVLILDWNGLRVEFIGLHLKSKFINQGERLWRDERERFIREA 176

Query: 146 -------------EPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192
                                +  +  P         +       E +  F  L      
Sbjct: 177 LTARIKMATEAANVRAYIDAKFRQVGNPALFVLGDFNDGPGKEYFEEQYLFFDLIANIQG 236

Query: 193 DAI-------RATHDTHHLYSFWDYYADSW---SKNKGIRIDHIMLSPEATS-------L 235
           +             D       W      +    +   I +DHI+ +    +        
Sbjct: 237 NVFATSRFLNHGLFDIPDEL-CWTVRFRDFVQPDRRPEILLDHILFTQGLVNGSLPWQVK 295

Query: 236 LHSARIDTKPRGWTKP--------SDHTPVIV 259
            H+ +++ +               SDH PV +
Sbjct: 296 PHAGKVEHEVHELANAGLPKDSQTSDHRPVSL 327


>gi|88802681|ref|ZP_01118208.1| endonuclease/exonuclease/phosphatase family protein [Polaribacter
           irgensii 23-P]
 gi|88781539|gb|EAR12717.1| endonuclease/exonuclease/phosphatase family protein [Polaribacter
           irgensii 23-P]
          Length = 329

 Score = 42.5 bits (98), Expect = 0.063,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 83/303 (27%), Gaps = 70/303 (23%)

Query: 5   TVATWNVNSIRARIHNLAAWI--------KENNPD--------------------IICLQ 36
            V +WNV        +             +EN PD                    ++ LQ
Sbjct: 52  KVLSWNVA-------HFVDSFDDPYIDSKRENQPDSLMGNKVASLVVALRRIDAAVVVLQ 104

Query: 37  ETKTEDKNFPF----ETLQSLNY--------HIETCGQKSYNGVAILSKYQPIEIVTHLP 84
           E   E   F      E LQ + Y        H         +   +   Y    + T + 
Sbjct: 105 E--FESAKFLRSLANEHLQDMGYKYFADVPSHGWYMNVVMMSKFPLGIIYGYGNVTTPVL 162

Query: 85  GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL 144
           G  +   A   + T      ++ +      +           +        +     L+ 
Sbjct: 163 GASIASGATETQNTLNTRMWSIDVYPSPNYNFLLTGVHLKAGRGERNVAMRKGQINFLKQ 222

Query: 145 EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL 204
           +       D N        +N +    +    L+ +   +K  +     A+  T D    
Sbjct: 223 QFKRFLKEDKNKNILVLGDFNSVQGSEEINLFLQEKNKREKFIDPLPDSAMTHTSDAPK- 281

Query: 205 YSFWDYYADSWSKNKGIRIDHIMLSPEATS--LLHSARI--DTKPRGWTKPSDHTPVIVS 260
                            R+D+++++        + SA++     P    + SDH PV ++
Sbjct: 282 ----------------RRLDYVLINTNMYKEYKVGSAKVSSLFSPLKMREISDHLPVTIN 325

Query: 261 LDI 263
             I
Sbjct: 326 FTI 328


>gi|325282271|ref|YP_004254812.1| Endonuclease/exonuclease/phosphatase [Deinococcus proteolyticus
           MRP]
 gi|324314080|gb|ADY25195.1| Endonuclease/exonuclease/phosphatase [Deinococcus proteolyticus
           MRP]
          Length = 326

 Score = 42.5 bits (98), Expect = 0.064,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 10/62 (16%)

Query: 4   VTVATWNVNSIRAR-----IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL-NYHI 57
           +T+ T+N+    AR        LAA I+  + D++ LQET   D  F  E L+ L  YH 
Sbjct: 105 LTLLTYNI----ARGTQGSAETLAAQIRAQDADLVTLQETNGWDAEFTPELLRRLPGYHA 160

Query: 58  ET 59
             
Sbjct: 161 AH 162


>gi|290976084|ref|XP_002670771.1| predicted protein [Naegleria gruberi]
 gi|284084333|gb|EFC38027.1| predicted protein [Naegleria gruberi]
          Length = 551

 Score = 42.5 bits (98), Expect = 0.064,   Method: Composition-based stats.
 Identities = 30/254 (11%), Positives = 58/254 (22%), Gaps = 38/254 (14%)

Query: 17  RIHNLAAWIKENNPDIICLQET---KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSK 73
           R + + + +KE   DII LQE          F  E  +  + +         +G+ +  +
Sbjct: 325 RKYKIFSVLKERRFDIIGLQEIDNQHASQIQFFLEQ-EGFSVYHSYKNYPKKDGLILAIR 383

Query: 74  YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKR 133
               EI        +       +     +    R   +   H           +    + 
Sbjct: 384 NTKFEIFNKGEKTLVKEYPEVFQYVIARDRVKGRFFCIINCHLTFQPRDTGPREKQVNEI 443

Query: 134 FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTD 193
             +        +  +I+ GD+N  P           E+                      
Sbjct: 444 LNQIGKIADPQKTSIIWFGDFNTSPHEKPIQLIEACESIPLQKSHDTVQEFWTCCGTTGR 503

Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK------PRG 247
                                         D+I  SP     +  +    +         
Sbjct: 504 NSIV--------------------------DYIWHSPSL--QVKDSGPCLEFVPKSSIPD 535

Query: 248 WTKPSDHTPVIVSL 261
               SDH P+    
Sbjct: 536 EDHGSDHLPLFAEF 549


>gi|256085040|ref|XP_002578732.1| neutral sphingomyelinase [Schistosoma mansoni]
 gi|238664115|emb|CAZ34970.1| putative neutral sphingomyelinase [Schistosoma mansoni]
          Length = 631

 Score = 42.5 bits (98), Expect = 0.064,   Method: Composition-based stats.
 Identities = 41/275 (14%), Positives = 69/275 (25%), Gaps = 31/275 (11%)

Query: 29  NPDIICLQETKTEDK--NFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGD 86
           + D+I LQE   E           +   Y           G+ I SK+    + TH    
Sbjct: 40  DFDVILLQEIWLESDYRKLRNILDEKYPYSNYFYCNLIGTGMCIFSKWTIECVFTHPFTA 99

Query: 87  DLDVQARFIEATFTINTQTL-RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELE 145
           +           +      L RI +      N   +                  +  +L 
Sbjct: 100 NGYPHLIHQADYYCGKGIGLARITSKEGFRINFYVTHLIARYELDRMLDRYNGHRISQLV 159

Query: 146 EPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT---- 201
           E + F    +                     +E+  +  KL +    + +   +      
Sbjct: 160 EVMEFVRMTSTG-SDAIIITGDFNLESNTSAIELFSTSLKLSDAWLNNTVALKNTNITDL 218

Query: 202 -HHLYSF----WDYYADSWSK--NKGIRIDHIM--LSPEATSL----------LHSARID 242
                +       Y    W+     G R+D+I     P                +S  +D
Sbjct: 219 ESEGCTCDRADNPYRNQLWTNTYGNGERLDYIFYRSGPSIIDSFYIPSYAKLVCNSCWLD 278

Query: 243 -TKPRGWTKP---SDHTPVIVSLDIPEPRKKQQDS 273
             K  G       SDH  V  S  I   R   +  
Sbjct: 279 MRKVPGDPHGLHYSDHEGVAASFTITRLRNPVKPE 313


>gi|254825627|ref|ZP_05230628.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes FSL
           J1-194]
 gi|254853407|ref|ZP_05242755.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes FSL
           R2-503]
 gi|254992839|ref|ZP_05275029.1| endonuclease/exonuclease/phosphatase family protein [Listeria
           monocytogenes FSL J2-064]
 gi|255519856|ref|ZP_05387093.1| endonuclease/exonuclease/phosphatase family protein [Listeria
           monocytogenes FSL J1-175]
 gi|300764548|ref|ZP_07074540.1| endonuclease/exonuclease/phosphatase family protein [Listeria
           monocytogenes FSL N1-017]
 gi|258606777|gb|EEW19385.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes FSL
           R2-503]
 gi|293594872|gb|EFG02633.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes FSL
           J1-194]
 gi|300514655|gb|EFK41710.1| endonuclease/exonuclease/phosphatase family protein [Listeria
           monocytogenes FSL N1-017]
          Length = 256

 Score = 42.5 bits (98), Expect = 0.064,   Method: Composition-based stats.
 Identities = 37/275 (13%), Positives = 72/275 (26%), Gaps = 34/275 (12%)

Query: 3   VVTVATWNVN---------SIRARIHNLAAWIKENNPDIICLQETKTEDKNFP----FET 49
           + +V T+N+          S   R     + + +   D +       E+   P     + 
Sbjct: 1   MFSVTTFNIRFDDTSERKKSWELRKTLTKSLLDKYQWDFMG-----VEEPLLPQMCDMKE 55

Query: 50  LQSLNYH-IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108
           +Q  +Y  +             +        +       L           T     + +
Sbjct: 56  MQDWDYFGVGRDDGFEKGEFTAVFYNSTRFTLLQEGHFWLSETPEVPSIHSTAMFPRICV 115

Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168
              +                   +    FASQ L  +  +I      I+    +      
Sbjct: 116 WGKFADSDGKQVYIFNTHLDHISEEARLFASQLLLKKAAIIAENSPVIVLGDFNTQPNTP 175

Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
             N      +  Q   +    G T +    H                 +N+  +ID+I +
Sbjct: 176 TYNYITEKYQDAQLISQKPAKGPTGSFHDFHPL-------------RPQNELEKIDYIFV 222

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           S E    +++             SDH PV  +LD 
Sbjct: 223 SNEF--KVNTYETIVDEVDGFSASDHFPVTANLDW 255


>gi|298204347|gb|ADI61822.1| endonuclease-reverse transcriptase [Bombyx mori]
          Length = 996

 Score = 42.5 bits (98), Expect = 0.064,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 73/257 (28%), Gaps = 20/257 (7%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN-YHIETCGQK 63
             AT NV ++  +   LA+  K    D  CLQET+           +     ++     +
Sbjct: 54  RFATLNVGTLTGKTKELASLFKRRKVDFACLQETRWT-GAKALNIGEGYKLMYVGARHGR 112

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +   +A+ +++    +  +   D L      +E                         T 
Sbjct: 113 NGVAIAVKAEHLENFLEVNRINDRLMSLKVLVEGEVINVISAYAPQAGCSRAEKDSFWTT 172

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
            +D +  I                      +  +   H                EV  S 
Sbjct: 173 LEDHLRQIPSKETMLLGGDLNGHIGTENKAFKRVHGGHG-------FGTINEEGEVILST 225

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
               ++  T+   A    H + ++      S        ID+I+++      + + ++  
Sbjct: 226 AAAFDLAITNTFFAKKPEHTI-TYKSGQTTSQ-------IDYILVNRAYIGRVTNCKVIP 277

Query: 244 KPRGWTKPSDHTPVIVS 260
                T+   H  V++ 
Sbjct: 278 GECAVTQ---HRIVVMD 291


>gi|45185112|ref|NP_982829.1| ABL118Wp [Ashbya gossypii ATCC 10895]
 gi|44980748|gb|AAS50653.1| ABL118Wp [Ashbya gossypii ATCC 10895]
          Length = 504

 Score = 42.5 bits (98), Expect = 0.064,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)

Query: 17  RIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYHIETCGQKSYN 66
           R   L + ++  NPD+ICLQE   T+ K+F  + LQ   Y  +       N
Sbjct: 135 RSKVLLSELQYYNPDVICLQEIDHTQYKSFWMDALQHAGYCSKFHRSFGKN 185


>gi|71480111|ref|NP_001025131.1| protein angel homolog 2 [Danio rerio]
 gi|82077818|sp|Q5RGT6|ANGE2_DANRE RecName: Full=Protein angel homolog 2
 gi|55962530|emb|CAI11673.1| novel protein similar to human KIAA0759 [Danio rerio]
          Length = 569

 Score = 42.5 bits (98), Expect = 0.065,   Method: Composition-based stats.
 Identities = 15/99 (15%), Positives = 33/99 (33%), Gaps = 5/99 (5%)

Query: 15  RARIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAIL 71
           R R  N+   +++ + DI+CLQE   ++ ++  +    L+SL YH E   +         
Sbjct: 230 RNRFPNIIKELEQYSADIMCLQEV--QEDHYKQQIKPSLESLGYHCEFKRRTGLKPDGCA 287

Query: 72  SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
             ++               +              + +  
Sbjct: 288 VIFKRERFSLVSCHPVEYFRRGVPLMDRDNVGLIVLLRP 326


>gi|315223415|ref|ZP_07865272.1| endonuclease/exonuclease/phosphatase [Capnocytophaga ochracea
           F0287]
 gi|314946588|gb|EFS98579.1| endonuclease/exonuclease/phosphatase [Capnocytophaga ochracea
           F0287]
          Length = 266

 Score = 42.5 bits (98), Expect = 0.066,   Method: Composition-based stats.
 Identities = 45/274 (16%), Positives = 71/274 (25%), Gaps = 31/274 (11%)

Query: 2   SVV-TVATWNVNSIRARIHNLAA-------WIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + +  +ATWNV     R              IKE N DI+ L E      +     L S 
Sbjct: 12  NTMYKIATWNV----ERPKKGTEKTSLAITKIKEVNADILVLTE---NATSISLTELYSF 64

Query: 54  NYHI-ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           + H          + V+I SK+Q  + +                        T+   +  
Sbjct: 65  SVHSLAYERTPEEHWVSIFSKWQITQQIKTFDNYRTACAVIKAPFGDIAVFGTIIPYHQA 124

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
              G    +  Y       K   + A    ++ E                          
Sbjct: 125 GVSGVRYGNLGYKQWEYHEKDLHQQAKNWEDIIEETQIPLWVMGDFNQSRYNLQGYGTEK 184

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
               L        L  +   D     H     +           +N    IDHI ++   
Sbjct: 185 VRQILTNYLEKLDLSCVTEGDLSPFLHPDPIKH---------KIRNN---IDHICIANNF 232

Query: 233 TSLLHSARI---DTKPRGWTKPSDHTPVIVSLDI 263
              +   ++   D         SDH  V +S DI
Sbjct: 233 IKQMKQYQVGAWDHFSEEGKYMSDHNGVFISFDI 266


>gi|255716040|ref|XP_002554301.1| KLTH0F02090p [Lachancea thermotolerans]
 gi|238935684|emb|CAR23864.1| KLTH0F02090p [Lachancea thermotolerans]
          Length = 440

 Score = 42.5 bits (98), Expect = 0.066,   Method: Composition-based stats.
 Identities = 34/261 (13%), Positives = 78/261 (29%), Gaps = 29/261 (11%)

Query: 18  IHNLAAWIKENNPDIICLQET--KTEDKNFPFETLQSLNY-HIETCGQKSYNGVAILSKY 74
           +H L      ++ D++ LQE   K++ +           Y  I   G  +  G+AILSK 
Sbjct: 47  LHGLEEDSGSDDYDVVALQEIWCKSDWEYIEETCRHRYPYRRIFYSGIIAGPGLAILSKI 106

Query: 75  QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI---------------GNLYLPHGNPI 119
                  +    +    A F    +   + ++ +                +++ P+    
Sbjct: 107 PIESTFLYRFPINGRPSAFFRGDWYVGKSVSVTLLKPTSSSSNALAILNSHMHAPYAQSG 166

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
            +  Y  +        + A+   +    ++  GD N  P                   ++
Sbjct: 167 DAAYYCHRSCQAWDMSQMANLYKKAGYAVVIVGDLNSKPGTLPHKFLTKETGFVDSWEQL 226

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
                 ++       ++         S  + +      ++  R+D+ ++ P     L + 
Sbjct: 227 HGKQDLVRISKLDPLLQIKQGGTTCDSILNTWRSMRRPDEACRLDYALVDPSRLQTLEAC 286

Query: 240 RIDTKPRGWTK------PSDH 254
                 R   +       SDH
Sbjct: 287 -----VRFTERIPEIGSFSDH 302


>gi|255264183|ref|ZP_05343525.1| endonuclease/exonuclease/phosphatase [Thalassiobium sp. R2A62]
 gi|255106518|gb|EET49192.1| endonuclease/exonuclease/phosphatase [Thalassiobium sp. R2A62]
          Length = 341

 Score = 42.5 bits (98), Expect = 0.068,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 12/53 (22%)

Query: 223 IDHIMLSPEATSLLHSARI-----------DTKPRG-WTKPSDHTPVIVSLDI 263
           +D+IM+SP+   L  S  I           D + R      SDH PV + +++
Sbjct: 289 LDYIMVSPDLAELAPSWHIWHPFEDPACWGDVELRDALLTASDHFPVTLDIEL 341


>gi|242763345|ref|XP_002340557.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
 gi|218723753|gb|EED23170.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
          Length = 924

 Score = 42.5 bits (98), Expect = 0.068,   Method: Composition-based stats.
 Identities = 39/251 (15%), Positives = 69/251 (27%), Gaps = 27/251 (10%)

Query: 28  NNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDD 87
            N DI+ +QE        P+  +      + T          IL +  P E     P   
Sbjct: 10  QNYDILAIQE--------PY--INKYTNPLTTYSLALKGSFHILLQPTPKEEYKKRPQVC 59

Query: 88  LDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEP 147
             V      AT+ +      +  L L      T   ++     +          L+    
Sbjct: 60  FYVNRGLDPATWEVQYHNRDLSTLTLHTAAHGTIHIHNVYNPGVNSNEESVINTLQTTMA 119

Query: 148 LIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF 207
                  +I+    + Y+P+          E       L +    + +       +    
Sbjct: 120 P---RTQHIVLGDFNRYHPLWAGPRYRHVDEEATKLINLIDEHRLEQLLPPGTITYE--- 173

Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPR 267
                ++ S      I+ +  S    + + S   DTKP  W    DH P+    D+   R
Sbjct: 174 ---RVNAKST-----INLVWASHNLANWVVSC--DTKPEWWYGA-DHVPISTQFDLTAVR 222

Query: 268 KKQQDSTSQNM 278
                    N 
Sbjct: 223 VPPMVRKQWNA 233


>gi|254780797|ref|YP_003065210.1| hypothetical protein CLIBASIA_03440 [Candidatus Liberibacter
          asiaticus str. psy62]
 gi|254040474|gb|ACT57270.1| hypothetical protein CLIBASIA_03440 [Candidatus Liberibacter
          asiaticus str. psy62]
          Length = 231

 Score = 42.5 bits (98), Expect = 0.068,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 16/51 (31%)

Query: 4  VTVATWNVNSI----------RARIH------NLAAWIKENNPDIICLQET 38
          + +A+WN+N++           + I        L  + ++ + DI+CLQE 
Sbjct: 7  IRIASWNINNLSEKSGVALFKNSVIREDNDYALLQKYAEQLDADIVCLQEI 57


>gi|270307561|ref|YP_003329619.1| endonuclease/exonuclease/phosphatase family [Dehalococcoides sp.
           VS]
 gi|270153453|gb|ACZ61291.1| endonuclease/exonuclease/phosphatase family [Dehalococcoides sp.
           VS]
          Length = 639

 Score = 42.5 bits (98), Expect = 0.068,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 19/41 (46%), Gaps = 5/41 (12%)

Query: 3   VVTVATWNV-NSI----RARIHNLAAWIKENNPDIICLQET 38
            + + T+N+ N      R  +  L   I+ +  D++ LQE 
Sbjct: 411 TLRIMTYNLHNGFNTQGRLDMEALVRVIENSGADVVALQEI 451



 Score = 40.9 bits (94), Expect = 0.18,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 7/43 (16%)

Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
           RID+I  SP+    + S  I +        SDH  VI  + + 
Sbjct: 604 RIDYIWASPDIV-YVDSFTIFS------LASDHLAVIADIRLS 639


>gi|322386957|ref|ZP_08060581.1| RgfB protein [Streptococcus cristatus ATCC 51100]
 gi|321269239|gb|EFX52175.1| RgfB protein [Streptococcus cristatus ATCC 51100]
          Length = 271

 Score = 42.5 bits (98), Expect = 0.069,   Method: Composition-based stats.
 Identities = 31/246 (12%), Positives = 69/246 (28%), Gaps = 9/246 (3%)

Query: 16  ARIHNLAAWIKENNPDIICLQETK--TEDKNFPFETLQSL-----NYHIETCGQKSYNGV 68
           ++++ LA  I +   D+ICLQE     E +                 H +    +    +
Sbjct: 19  SKLNQLAERILQEKYDVICLQEVNQLVESEQVVQAPFYYAVDGAIPIHQDHYALRLVEKL 78

Query: 69  AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKI 128
           A            +  G D+  +   I +   +  + L + ++  P           +  
Sbjct: 79  AEAGLDYYWSWAYNHIGFDIYNEGVAILSRKPLKARELLVSDVNDPSDYHTRKVLLAETE 138

Query: 129 SWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN 188
              +     +      ++                    ++  +                 
Sbjct: 139 LDGRLITVASCHLSWWDKGFQGEWAKFESELLQVETPLVLMGDFNNPVDYEGYQHILQSP 198

Query: 189 MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGW 248
           +   D+ +    T    +     A        ++ID+I  S +  ++  SA +    RG 
Sbjct: 199 LALQDSHKVAVQTIGAATVEGDIAGWAGNKDALKIDYIFTSKDF-NVERSAVVFDGQRGP 257

Query: 249 TKPSDH 254
              SDH
Sbjct: 258 VV-SDH 262


>gi|90425348|ref|YP_533718.1| endonuclease/exonuclease/phosphatase [Rhodopseudomonas palustris
           BisB18]
 gi|90107362|gb|ABD89399.1| Endonuclease/exonuclease/phosphatase [Rhodopseudomonas palustris
           BisB18]
          Length = 328

 Score = 42.5 bits (98), Expect = 0.069,   Method: Composition-based stats.
 Identities = 34/289 (11%), Positives = 74/289 (25%), Gaps = 39/289 (13%)

Query: 1   MSVVTVATWNVNSI----------RARIHNLAAWIKENNPDIICLQET-KTEDKNFPFET 49
           M  + V + N   +          R R   L+  I + + D++ LQE  + +      E 
Sbjct: 46  MGTLRVGSLNT-GLSVWKIDLQQWRLRAAQLSKLIGDLSLDVVLLQEIWRIKWDETTDEM 104

Query: 50  ---LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
              L  L       G ++ + V   +     ++ + L       +               
Sbjct: 105 KTFLTGLG----LSGDQNKDDVLAAALGSGFQVRSSLVPSFDRGRREPGLYWGLTIVSRF 160

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
            I  +     +     ++       K  L      + +   L                  
Sbjct: 161 PIEQVEKKELSYSKFDRWPRIAQSGKIKLANGDSSIFVNVHLPA----ESHESRLGLGLE 216

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI----- 221
            +  + +     +                    +    +S        +  N+       
Sbjct: 217 TLSFSRSLGAPTLCIGGDMNAGPQAGPVQIFMTEYSDCWSSGSTRVVKFEGNESRAGSAL 276

Query: 222 -------RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTP-VIVSLD 262
                  RID+++      + + S+       G    SDH P VI  ++
Sbjct: 277 YRTVAEGRIDYLLADK--MARITSSTYLYGDYGSAPLSDH-PFVIAEIE 322


>gi|147842050|emb|CAN75859.1| hypothetical protein VITISV_014707 [Vitis vinifera]
          Length = 1407

 Score = 42.5 bits (98), Expect = 0.069,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 22/61 (36%), Gaps = 9/61 (14%)

Query: 201 THHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
               Y++          N+   R+D  +++        S+ I    R     SDH PV++
Sbjct: 580 QGGDYTW-----SGGPNNRYWARLDRFLVTSCWIDQF-SSVIQK--RLSRPASDHFPVVL 631

Query: 260 S 260
            
Sbjct: 632 E 632


>gi|288942589|ref|YP_003444829.1| endonuclease/exonuclease/phosphatase [Allochromatium vinosum DSM
           180]
 gi|288897961|gb|ADC63797.1| Endonuclease/exonuclease/phosphatase [Allochromatium vinosum DSM
           180]
          Length = 255

 Score = 42.5 bits (98), Expect = 0.070,   Method: Composition-based stats.
 Identities = 28/249 (11%), Positives = 59/249 (23%), Gaps = 45/249 (18%)

Query: 16  ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75
           ARI  L         D++ LQE   +  +     +    Y         +      +   
Sbjct: 42  ARIAQLLR-----QFDVVGLQEV--DAGSLRSSYVDQTQYLATQGAFPHWYRQINRNLAP 94

Query: 76  PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135
             +    L                 +  + + +    L  G  +                
Sbjct: 95  FAQHSNGLLARPRPACITEHRL-PGLPGRGVVVAEFALDDGEVLAIGI------------ 141

Query: 136 RFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAI 195
                       L    +   +   +       +               K        + 
Sbjct: 142 ----------VHLALGWNARRLQLDYLSRLAQTYPYLVLMGDFNCGCNSKGLRNMVRRSG 191

Query: 196 RATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHT 255
               D     +F  +       N    +DHI++S      + +AR+          SDH 
Sbjct: 192 MRGLDCELK-TFPSWRPRH---N----LDHILVSRPIE--VVAARVLDYAL-----SDHL 236

Query: 256 PVIVSLDIP 264
           P+ + +++P
Sbjct: 237 PISMRIELP 245


>gi|163119479|ref|YP_079289.2| hypothetical protein BL01872 [Bacillus licheniformis ATCC 14580]
 gi|145902986|gb|AAU23651.2| hypothetical protein BL01872 [Bacillus licheniformis ATCC 14580]
          Length = 241

 Score = 42.5 bits (98), Expect = 0.070,   Method: Composition-based stats.
 Identities = 40/261 (15%), Positives = 77/261 (29%), Gaps = 33/261 (12%)

Query: 4   VT--VATWNVNSIRARIHNL-----AAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56
           +   + T+N++  + R   +     A  I ++  DII L E    D++F           
Sbjct: 1   MKFSIMTFNIHHGKGRDRRVDLGRTAGVIAQSGCDIIGLNEV---DRHFSN--------R 49

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
            +   Q       +   Y     ++   GD  + +            +  R  +     G
Sbjct: 50  SDYEDQIGRLAEQLNMHYAYCPSLSLSSGDSSEKRQYGNALLTRFPIKKERHHSFNFVKG 109

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
                +  +  +    R  R     L L   L       +I +  +   P+I   D    
Sbjct: 110 LIEGRSLLEADVRIGDRLFRVFVTHLSLNPWLHGKQTDFLIEKVQESDLPVIVTGDFNMK 169

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
              R   +  + +               ++   +           R+D+I LSP     +
Sbjct: 170 PYSRGWKKVAEKLADLWDESQY---GQGFTHPSHRPR-------RRLDYIFLSPSF--HV 217

Query: 237 HSARIDTKPRGWTKPSDHTPV 257
            +A I          SDH P+
Sbjct: 218 SAAEI---VAVDPNASDHLPL 235


>gi|15675775|ref|NP_269949.1| hypothetical protein SPy_1985 [Streptococcus pyogenes M1 GAS]
 gi|71911504|ref|YP_283054.1| exodeoxyribonuclease III [Streptococcus pyogenes MGAS5005]
 gi|13622999|gb|AAK34670.1| hypothetical protein SPy_1985 [Streptococcus pyogenes M1 GAS]
 gi|71854286|gb|AAZ52309.1| exodeoxyribonuclease III [Streptococcus pyogenes MGAS5005]
          Length = 272

 Score = 42.5 bits (98), Expect = 0.070,   Method: Composition-based stats.
 Identities = 36/274 (13%), Positives = 85/274 (31%), Gaps = 20/274 (7%)

Query: 3   VVTVATWNVNSIRAR--IHNLAAW---IKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57
           +  V T N +S      +  L A    I     DIICLQE    ++    E    L  + 
Sbjct: 1   MTKVLTLNTHSWMQANTLKKLVALAEHILAEKYDIICLQEI---NQLIESELATDLPRYQ 57

Query: 58  E-----TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
                 +  +  +  + I    +  +        +      + E    ++ Q + + ++ 
Sbjct: 58  ALSGTPSIHKDHFALLLIHYLQKRGQHYYWSWAYNHIGYDIYQEGVAILSKQPIHVSDIL 117

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLI---FAGDYNIIPQPHDCYNPIIW 169
           +   +  T       +             + +        F G++  + +     N  + 
Sbjct: 118 VSAMDDETDYHTRRSLIAKTTLDGKEVAVVNVHLSWFDKGFLGEWEKLEKELLTLNCPLL 177

Query: 170 ENDACFTLEVRQSFQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227
                     +  +Q +    +   D+ +        +S            + +++DH+ 
Sbjct: 178 LMGDFNNPTDQDGYQVMMGSPLDLQDSHKGADHVFGDHSIVADIDGWQGNKEALKVDHVF 237

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
            S +    + S++I  +       SDH  + V+L
Sbjct: 238 TSKDFI--IRSSKITFEGGDAPVVSDHYGLEVTL 269


>gi|241949399|ref|XP_002417422.1| CCR4-NOT complex subunit, putative; carbon catabolite repressor
           protein 4, putative; cytoplasmic deadenylase, putative;
           glucose-repressible alcohol dehydrogenase
           transcriptional effector, putative [Candida dubliniensis
           CD36]
 gi|223640760|emb|CAX45074.1| CCR4-NOT complex subunit, putative [Candida dubliniensis CD36]
          Length = 784

 Score = 42.5 bits (98), Expect = 0.070,   Method: Composition-based stats.
 Identities = 38/287 (13%), Positives = 69/287 (24%), Gaps = 53/287 (18%)

Query: 31  DIICLQE--TKTEDK-NFPFETLQSL-NYHI----------------------------- 57
           DIIC+QE  TKT ++   P  T      Y                               
Sbjct: 498 DIICMQEVETKTFNEFWLPVMTANGYKGYFFSKTRSKTMNEADSKKVDGCATFFKNDKFS 557

Query: 58  -ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                   YN V + S              + D  A         + + + + N +L   
Sbjct: 558 LVHKQNFEYNSVCMGSDKYKKTKDLFNRFMNKDNIALISYLQHKESGEKIAVVNTHLHWD 617

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
                 K       ++       +               I+    +              
Sbjct: 618 PAFNDVKALQVGILLEELQGIIKKYRHTNSNEDIKNSSIIVCGDFNSVKDSAVYQLFSTG 677

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSF-------WDYYADSWSKNKGIRIDHIMLS 229
                     ++ G        H      ++       +     +++ N    ID+I  S
Sbjct: 678 ASKGHEDMNGRDYGKFTEEGFHHPFKLKSAYETVGELPFTNLTPAFTDN----IDYIWYS 733

Query: 230 -PEATSLLHSARIDTKPRG-------WTKPSDHTPVIVSLDIPEPRK 268
            P         R+D +             PSDH P++    + + +K
Sbjct: 734 TPTLQVKGLLGRVDEEYTSHSIGFPDANFPSDHVPILAKFHLKKGKK 780


>gi|224109796|ref|XP_002333199.1| predicted protein [Populus trichocarpa]
 gi|222835077|gb|EEE73526.1| predicted protein [Populus trichocarpa]
          Length = 439

 Score = 42.5 bits (98), Expect = 0.070,   Method: Composition-based stats.
 Identities = 44/279 (15%), Positives = 77/279 (27%), Gaps = 45/279 (16%)

Query: 6   VATWNVNSI--RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +  WNV  +  R +   L    ++ +  I+ + ETK E  N  F  +     H       
Sbjct: 97  IIVWNVCGLGGREKKRCLRNLGRKFDLHILGILETKLETLN-DFTIIAIWGRHPRAWYAV 155

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
              G++          +  +    + +  R +    T N   L     ++   N      
Sbjct: 156 PSLGLSGGILCIWNPDLFCVSSCSVAMNGRILHIEGTFNRSNLDCLVSFVYAPNGGNLKN 215

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFA-GDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                    R        L  +        D     Q            D C  +E+   
Sbjct: 216 ELWTYLVTFRDSVSKPWCLAGDFNETLFPSDRKGGSQITSSMTRFKNCIDGCNLMELPL- 274

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
                                 +++     ++       RID I +S +      S+   
Sbjct: 275 ------------------NGRKFTW--SRGNA-----ASRIDRIFVSGDWLQTFPSST-- 307

Query: 243 TKPRGWTKPS-DHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
               G +K S DH P+ + LD          ST+   KP
Sbjct: 308 --LFGLSKYSYDHRPLHLLLD----------STNWGPKP 334


>gi|117167885|gb|AAI24748.1| Si:ch211-181h6.2 protein [Danio rerio]
          Length = 569

 Score = 42.5 bits (98), Expect = 0.070,   Method: Composition-based stats.
 Identities = 15/99 (15%), Positives = 33/99 (33%), Gaps = 5/99 (5%)

Query: 15  RARIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAIL 71
           R R  N+   +++ + DI+CLQE   ++ ++  +    L+SL YH E   +         
Sbjct: 230 RNRFPNIIKELEQYSADIMCLQEV--QEDHYKQQIKPSLESLGYHCEFKRRTGLKPDGCA 287

Query: 72  SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
             ++               +              + +  
Sbjct: 288 VIFKRERFSLVSCHPVEYFRRGVPLMDRDNVGLIVLLRP 326


>gi|320104403|ref|YP_004179994.1| endonuclease/exonuclease/phosphatase [Isosphaera pallida ATCC
          43644]
 gi|319751685|gb|ADV63445.1| Endonuclease/exonuclease/phosphatase [Isosphaera pallida ATCC
          43644]
          Length = 356

 Score = 42.5 bits (98), Expect = 0.071,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 22/44 (50%), Gaps = 6/44 (13%)

Query: 4  VTVATWNVNSI------RARIHNLAAWIKENNPDIICLQETKTE 41
          + + TWN +++      + R  +    + E  PD+I LQE  ++
Sbjct: 56 IRIVTWNCDALFTTDEVKRRKSDFINMVAEVQPDVILLQEVTSQ 99


>gi|255073017|ref|XP_002500183.1| predicted protein [Micromonas sp. RCC299]
 gi|226515445|gb|ACO61441.1| predicted protein [Micromonas sp. RCC299]
          Length = 590

 Score = 42.5 bits (98), Expect = 0.071,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 6/54 (11%)

Query: 7   ATWNVNSIRARIHNLAAWIKENNPDIICLQETKTED-KNFPFETLQSLNYHIET 59
            +WN      R  N+   I  ++ DI+CLQE +++  ++F    L    Y    
Sbjct: 262 LSWN-----YRRQNILKEIVMHDADILCLQEVQSDHFEDFFAGELAKAGYTAVY 310


>gi|257052454|ref|YP_003130287.1| Endonuclease/exonuclease/phosphatase [Halorhabdus utahensis DSM
           12940]
 gi|256691217|gb|ACV11554.1| Endonuclease/exonuclease/phosphatase [Halorhabdus utahensis DSM
           12940]
          Length = 260

 Score = 42.5 bits (98), Expect = 0.072,   Method: Composition-based stats.
 Identities = 29/247 (11%), Positives = 67/247 (27%), Gaps = 13/247 (5%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQP 76
           R   +++ I+ + PD++ LQE    D        +  ++     G+         +    
Sbjct: 20  RREAVSSTIRFHAPDVVGLQE--PLDHQLADVADRLPSFEWIGSGRVDGESEGEHTPIGY 77

Query: 77  IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
                     D    +   E   ++         +         +       +       
Sbjct: 78  RTDRIEYVDGDTFWLSEAPEEPGSVGWDARYPRIVTWARLRDRRTDATLLFANTHFSHDG 137

Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIR 196
             ++R      L    D           +      +  + +   +      +     +  
Sbjct: 138 PRARRKSAHLLLDRLADLRDDEPVVLTGDFNCVAGEEPYEILTGEDSPLALSGEQERSAE 197

Query: 197 ATHDTHHLYSFWDYYADSWSKNKGIR-IDHIMLSPEATSLLHSARIDTKPRGWTK-PSDH 254
             H      +        +      R IDH+  +P+ T  + +  + +      + PSDH
Sbjct: 198 PAHGPPTSVT-------DFENLVPNRKIDHVFTTPDVT--VGTHGVCSDVYDDGRFPSDH 248

Query: 255 TPVIVSL 261
            PV+V L
Sbjct: 249 LPVLVEL 255


>gi|320547790|ref|ZP_08042074.1| RgfB protein [Streptococcus equinus ATCC 9812]
 gi|320447550|gb|EFW88309.1| RgfB protein [Streptococcus equinus ATCC 9812]
          Length = 271

 Score = 42.5 bits (98), Expect = 0.072,   Method: Composition-based stats.
 Identities = 48/278 (17%), Positives = 86/278 (30%), Gaps = 30/278 (10%)

Query: 5   TVATWNVNS-IRA-RIHNLAAWIK---ENNPDIICLQ---------ETKTED--KNFPFE 48
              T N +S + A  +  L    +     + D+ICLQ         ETK  +  +N P  
Sbjct: 3   KFLTLNTHSWLEANALKKLFDLAETIYSEDYDVICLQEINQDIRGLETKEVEGYENLPGS 62

Query: 49  -TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107
             L   NY ++        G      +    I      + + + ++       I    + 
Sbjct: 63  PALHRDNYALQLVNYLKSQGRHYYWSWAYNHIGYDKYNEGVVILSKKPIKVQDILVSEVD 122

Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167
             + +         T+ D K   +         +    E        +  P+P       
Sbjct: 123 DEHDFHTRRVLAAETEVDGKTITVVSLHMSWYGKGFESEWAKLEKALSDYPKPLVLMGDF 182

Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK-GIRIDHI 226
               D      + QS   LQ+      +     T           D W  NK  +++DH+
Sbjct: 183 NNPTDTAGYEMILQSPLDLQDSHKVAKVIQGDHTIIE------DIDGWEGNKQSLKVDHV 236

Query: 227 MLSPEATSLLHSARIDTKPRGWTKP--SDHTPVIVSLD 262
             S +    + S+++     G   P  SDH  + V L+
Sbjct: 237 FTSKDID--IQSSKVVFD--GGESPIVSDHFGLAVELN 270


>gi|255025182|ref|ZP_05297168.1| endonuclease/exonuclease/phosphatase family protein [Listeria
           monocytogenes FSL J2-003]
          Length = 256

 Score = 42.5 bits (98), Expect = 0.072,   Method: Composition-based stats.
 Identities = 36/271 (13%), Positives = 71/271 (26%), Gaps = 26/271 (9%)

Query: 3   VVTVATWNVN---------SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + +V T+N+          S   R     + + +   D + ++E     +    + +   
Sbjct: 1   MFSVTTFNIRFDDTSERKKSWELRKTLTKSLLDKYQWDFMGVEE-PLLPQMLDMKAMLDW 59

Query: 54  NYH-IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           +Y  +             +        +       L           T     + +   +
Sbjct: 60  DYFGVGRDDGLEKGEFTAVFYNSTRFTLLQEGHFWLSDTPDVPSIHSTAMFPRICVWGKF 119

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                              +    FASQ L  +  +I      II    +        N 
Sbjct: 120 ADSDGKQFYIFNTHLDHISEEARLFASQLLLKKAAIIAENSPVIILGDFNTQPNTPTYNY 179

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                +  Q   +    G T +    H                 +N+  +ID+I +S E 
Sbjct: 180 ITEKYQDAQLISQKPAKGPTGSFHDFHPL-------------RPENELEKIDYIFVSNEF 226

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              + +             SDH PV  +LD 
Sbjct: 227 --QVSTYETIVDEVDGFSASDHFPVTANLDW 255


>gi|139474462|ref|YP_001129178.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pyogenes str. Manfredo]
 gi|134272709|emb|CAM30981.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           pyogenes str. Manfredo]
          Length = 272

 Score = 42.5 bits (98), Expect = 0.072,   Method: Composition-based stats.
 Identities = 37/276 (13%), Positives = 86/276 (31%), Gaps = 20/276 (7%)

Query: 3   VVTVATWNVNSIRAR--IHNLAAW---IKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57
           +  V T N +S      +  L A    I     DIICLQE    ++    E    L  + 
Sbjct: 1   MTKVLTLNTHSWMQANTLKKLVALAEHILAEKYDIICLQEI---NQLIESELATDLPRYQ 57

Query: 58  E-----TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
                 +  +  +  + I    +  +        +      + E    ++ Q + + ++ 
Sbjct: 58  ALSGTPSIHKDHFALLLIHYLQKRGQHYYWSWAYNHIGYDIYHEGVAILSKQPIHVSDIL 117

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLI---FAGDYNIIPQPHDCYNPIIW 169
           +      T+      +    R        + +        F G++  + +     N  + 
Sbjct: 118 VSAMADETNYHTRRSLIAKTRLDGKEVAVVNVHLSWFDKGFLGEWEKLEKELLTLNCPLL 177

Query: 170 ENDACFTLEVRQSFQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227
                     +  +Q +    +   D+ +        +S            + +++DH+ 
Sbjct: 178 LMGDFNNPTDQDGYQVMMGSPLDLQDSHKVADHVFGDHSIVADIDGWQGNKEALKVDHVF 237

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            S +    + S++   +       SDH  + V+LD 
Sbjct: 238 TSKDFI--IRSSKTTFEGGDAPVVSDHYGLEVTLDW 271


>gi|315644659|ref|ZP_07897790.1| 5'-Nucleotidase domain protein [Paenibacillus vortex V453]
 gi|315279918|gb|EFU43217.1| 5'-Nucleotidase domain protein [Paenibacillus vortex V453]
          Length = 2086

 Score = 42.5 bits (98), Expect = 0.073,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 26/67 (38%), Gaps = 10/67 (14%)

Query: 200  DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID---TKPRGWTKPSDHTP 256
                 Y++  Y  +S        +DHI++S   T       +      P    + SDH P
Sbjct: 1076 PLKEQYTY-TYDGNSQV------LDHILVSKNLTRSTQVDVVHLNADFPASKGRVSDHDP 1128

Query: 257  VIVSLDI 263
            V+  +D+
Sbjct: 1129 VVAQIDL 1135


>gi|281424056|ref|ZP_06254969.1| endonuclease/Exonuclease/phosphatase family protein [Prevotella
           oris F0302]
 gi|281401839|gb|EFB32670.1| endonuclease/Exonuclease/phosphatase family protein [Prevotella
           oris F0302]
          Length = 313

 Score = 42.5 bits (98), Expect = 0.073,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 22/61 (36%), Gaps = 21/61 (34%)

Query: 223 IDHIMLSPEATSLLHSARI--------DTKPRGWTKP-------------SDHTPVIVSL 261
           +DH++ S     L  S  I        D +  G  +P             SDH P++V  
Sbjct: 252 LDHVLCSEALVPLFRSCTIADFPFLLTDDEVYGGLQPLRNFHGAKYLNGFSDHLPLVVKF 311

Query: 262 D 262
           D
Sbjct: 312 D 312


>gi|325922580|ref|ZP_08184334.1| metal-dependent hydrolase [Xanthomonas gardneri ATCC 19865]
 gi|325546930|gb|EGD18030.1| metal-dependent hydrolase [Xanthomonas gardneri ATCC 19865]
          Length = 255

 Score = 42.5 bits (98), Expect = 0.073,   Method: Composition-based stats.
 Identities = 16/95 (16%), Positives = 31/95 (32%), Gaps = 14/95 (14%)

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
             +A    +      + +        R    +  +++F  +  D         IDHI++S
Sbjct: 170 HPNAMLMGDFNCMADRPEMQALYRHTRLQPPSCEVHTFPSWRPD-------RAIDHILVS 222

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
              T       I+         SDH  V + + +P
Sbjct: 223 DSLT-------IERIEAIPAAFSDHLAVGMDIRVP 250


>gi|260584082|ref|ZP_05851830.1| RgfB protein [Granulicatella elegans ATCC 700633]
 gi|260158708|gb|EEW93776.1| RgfB protein [Granulicatella elegans ATCC 700633]
          Length = 271

 Score = 42.5 bits (98), Expect = 0.073,   Method: Composition-based stats.
 Identities = 33/277 (11%), Positives = 75/277 (27%), Gaps = 24/277 (8%)

Query: 4   VTVATWNVNSI--RARIHNL----AAWIKENNPDIICLQET---------KTED--KNFP 46
           +   T N +S   +             + + N D+IC QE          K +D  K  P
Sbjct: 1   MKFLTLNTHSWMEKEAEEKFNLLLQDILDK-NYDLICFQEVNQEITLPEVKVDDYYKALP 59

Query: 47  FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
                    H +   +     +A   +        +  G D   +   I +   I  + +
Sbjct: 60  SAEPI----HQDHYVRLLLEKLAESGRNYYWTWSYNHIGYDRYHEGVAILSKTPIEAREV 115

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
            + ++  P           + +   K     +      ++                    
Sbjct: 116 LVSDVDDPTDYHTRRVALAETVVDGKELAVASVHLSWWDKGFQEEWARFETVLKTLNKPL 175

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226
           ++  +      +          +G  DA     +    Y+            + +RID++
Sbjct: 176 LLAGDFNNPAGQEGYQAILASPLGLQDAFEVAKEKSGSYTVPPEIDGWKGNTEPLRIDYV 235

Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             + E    + +  +        + SDH  +   L+ 
Sbjct: 236 FTTKELE--IENLHVVFDGNHSPQVSDHFGLNAQLNW 270


>gi|261879847|ref|ZP_06006274.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           bergensis DSM 17361]
 gi|270333506|gb|EFA44292.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           bergensis DSM 17361]
          Length = 321

 Score = 42.5 bits (98), Expect = 0.074,   Method: Composition-based stats.
 Identities = 28/260 (10%), Positives = 60/260 (23%), Gaps = 44/260 (16%)

Query: 30  PDIICLQETKTEDKNFPFET-----LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLP 84
           PD++ L E   E+ +   +      L++  Y           G+ +   Y P        
Sbjct: 72  PDLVALTEV--ENDSVVHDLTKRSLLKNAGYEYVVTDSPDQRGIDVALLYLPSS-----F 124

Query: 85  GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL 144
                   R         T+ +   +     G+ +                    +    
Sbjct: 125 RLLSSRSIRIPPFRHFRPTRDILCASGATASGDTLHVFVVHAPSRSAGEKATRPYRMHVA 184

Query: 145 EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL 204
            +          +           + +              L+++      R  H     
Sbjct: 185 RQLYGAIDSLRALYAQPGIIVMGDFNDYTGNASIQFLLSGGLRDVS--AEARGGHGAKGT 242

Query: 205 YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKP------------------- 245
           Y +   +           +DHI+      + +    I+  P                   
Sbjct: 243 YRYHSDWGS---------LDHILCDEHTAACVVKCSINDAPFLLENEQKYGGVKPRRTYL 293

Query: 246 --RGWTKPSDHTPVIVSLDI 263
             R     SDH P++   D+
Sbjct: 294 GPRYLGGFSDHLPLVAVFDL 313


>gi|261856796|ref|YP_003264079.1| endonuclease/exonuclease/phosphatase [Halothiobacillus
          neapolitanus c2]
 gi|261837265|gb|ACX97032.1| Endonuclease/exonuclease/phosphatase [Halothiobacillus
          neapolitanus c2]
          Length = 243

 Score = 42.5 bits (98), Expect = 0.075,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 7/64 (10%)

Query: 3  VVTVATWNVN-SI----RARIHNLAAWIKENNPDIICLQETKTED--KNFPFETLQSLNY 55
          ++TVATWN++  I    R  +  +   I+  + D+I LQE    D   +      Q+  Y
Sbjct: 2  ILTVATWNIHAGIGRDRRLDLARIWRVIELIDADLIGLQEVVLTDLHDDLLIRWAQAAGY 61

Query: 56 HIET 59
              
Sbjct: 62 ATHF 65


>gi|147802057|emb|CAN74986.1| hypothetical protein VITISV_008771 [Vitis vinifera]
          Length = 1971

 Score = 42.5 bits (98), Expect = 0.075,   Method: Composition-based stats.
 Identities = 21/167 (12%), Positives = 52/167 (31%), Gaps = 7/167 (4%)

Query: 94  FIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGD 153
                  +  + + +G   +          ++   S +        + L  EE       
Sbjct: 377 VFWDKRVLELEGMEVGLFSISCRFKNCEDGFNWVFSGVYGPTLKRYRELFWEELRAIRRL 436

Query: 154 YNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD 213
           ++        +N I + N++     +  S ++   +     +R        +++    + 
Sbjct: 437 WSDPWCIGGDFNLIRFPNESRRGGRLSSSMRRFSEVIDDLDLRDLPLQGGPFTW----SG 492

Query: 214 SWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
             +     RID  ++S +           T PR     SDH P+++ 
Sbjct: 493 GLNNQAMTRIDRFLVSEDWEGHFKGVVQCTLPR---PVSDHFPILLD 536


>gi|46094758|gb|AAS79823.1| putative exonuclease [Homo sapiens]
          Length = 204

 Score = 42.5 bits (98), Expect = 0.077,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 2/37 (5%)

Query: 4  VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQET 38
          +++   NVN   A +    +A WI+ + P + CLQET
Sbjct: 8  ISIVMLNVNGQNAPLKRYRMAEWIRIHQPSVCCLQET 44


>gi|254831846|ref|ZP_05236501.1| hypothetical protein Lmon1_10855 [Listeria monocytogenes 10403S]
          Length = 256

 Score = 42.5 bits (98), Expect = 0.078,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 3/58 (5%)

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           SF D+       N+  +ID+I +S E    + +             SDH PV  +LD 
Sbjct: 201 SFHDFRPL-RPINELEKIDYIFVSKEF--QVCTYETIVDEVDGFSASDHFPVTANLDW 255


>gi|147778389|emb|CAN69557.1| hypothetical protein VITISV_000928 [Vitis vinifera]
          Length = 648

 Score = 42.5 bits (98), Expect = 0.078,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 23/57 (40%), Gaps = 11/57 (19%)

Query: 211 YADSWSKNKGI------RIDHIMLSPEATSLLHSARIDTKPRGWTKP-SDHTPVIVS 260
              +++ N G+      R+D  ++SP               R   +P SDH P+++ 
Sbjct: 549 QGGAFTWNGGLNNVSRARLDRFLVSPCWLDQFSRVS----QRRLPRPISDHFPILLE 601


>gi|328709897|ref|XP_003244099.1| PREDICTED: nocturnin-like isoform 2 [Acyrthosiphon pisum]
 gi|328709899|ref|XP_001951703.2| PREDICTED: nocturnin-like isoform 1 [Acyrthosiphon pisum]
          Length = 417

 Score = 42.1 bits (97), Expect = 0.080,   Method: Composition-based stats.
 Identities = 34/249 (13%), Positives = 63/249 (25%), Gaps = 15/249 (6%)

Query: 20  NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEI 79
           ++   I ++NPDIICLQE      +F F + ++L     +           +        
Sbjct: 166 HMLEEILKHNPDIICLQEV----DHFDFLS-RALATQSYSGLFVPKPDSPCVYINDNNGP 220

Query: 80  VTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFAS 139
                    D      +    +   T+    + L        +   +             
Sbjct: 221 DGCAIFYKNDKFDLLEKHDKVLQVWTVHSNQVSLLLV-LKDKSTQKELCVSTTHLKARKG 279

Query: 140 QRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH 199
             L              I         I+  +      E   S     +    D+     
Sbjct: 280 ALLSTLRNEQGKDLLQFISSHAADRPTIVCGDFNAEPTEPVYSTMCSCSYLPLDSAYKLS 339

Query: 200 DTHHLYSFWDYYADSWSKNKGIRIDHIMLSP------EATSLLHSARI-DTKPRGWTKPS 252
            +  LY+ W              ID++  +           +     I + +    T PS
Sbjct: 340 GSEPLYTSWKIRGGEGEVMHT--IDYMFYTKHKLTVSNILDMPKEIDIGENRVPSMTYPS 397

Query: 253 DHTPVIVSL 261
           DH  +I   
Sbjct: 398 DHFSLISDF 406


>gi|283833916|ref|ZP_06353657.1| endonuclease/exonuclease/phosphatase family protein [Citrobacter
           youngae ATCC 29220]
 gi|291070588|gb|EFE08697.1| endonuclease/exonuclease/phosphatase family protein [Citrobacter
           youngae ATCC 29220]
          Length = 253

 Score = 42.1 bits (97), Expect = 0.080,   Method: Composition-based stats.
 Identities = 27/251 (10%), Positives = 59/251 (23%), Gaps = 26/251 (10%)

Query: 15  RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKY 74
           R  +  L   ++    DI+CLQE             +    H+E     ++      + +
Sbjct: 27  RFILPELREAVRTVGADIVCLQEV--------LGAHEVHPLHVENWPDTTHYEFLADTMW 78

Query: 75  QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDK--ISWIK 132
                  +            +      + +   +          +               
Sbjct: 79  SDFAYGRNAVYPQGHHGNAVLSRYPIEHFENRDVSVGASEKRGVLYCRIVPPMLSHPVHV 138

Query: 133 RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192
             +    +    +  L    D+       +        ND         +     N    
Sbjct: 139 MCVHLGLREAHRQAQLAMLADWVNALPEGEPVVVAGDFNDWRQK----ANHPLKANADLD 194

Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPS 252
           +     H      +F   +         +R+D I +     S   +       R W   S
Sbjct: 195 EIFTRAHGRPAR-TFPVQFPL-------LRLDRIYVKNANASTPTA----LALRHWRHLS 242

Query: 253 DHTPVIVSLDI 263
           DH P+   + +
Sbjct: 243 DHAPLSAEIHL 253


>gi|77554244|gb|ABA97040.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1913

 Score = 42.1 bits (97), Expect = 0.080,   Method: Composition-based stats.
 Identities = 32/269 (11%), Positives = 80/269 (29%), Gaps = 32/269 (11%)

Query: 16  ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75
           A + +L A +KE N  ++ L ET+                  +   +       +  K  
Sbjct: 616 AAVRDLIALVKEANSQVVFLSETR------------------QKIERIRRLRSRLGLKGF 657

Query: 76  PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135
                  L G         I        +      + L   +P+    +      ++   
Sbjct: 658 VGCNSDGLSGGLALFWHESIFMDVKSVNERYVDAYMRLSPEDPLCHVTFVYGEPRVENRH 717

Query: 136 RFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAI 195
           R  S+ L+L++         +I    +               E +   +  +++     +
Sbjct: 718 RLWSRLLDLKQSSPLPW---MIIGDFNETLWQFEHFSVSKRGEAQM--RAFRDVLQICEL 772

Query: 196 RATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHT 255
                +   Y++ D   +  S N  +R+D  +       +  ++++       +  SDH 
Sbjct: 773 VDLGFSGVPYTY-DNRREGRS-NVKVRLDRALADNSWRDIYSNSQV---VHLTSSCSDHC 827

Query: 256 PVIVSLDIPEPRKKQQD----STSQNMKP 280
           P+++       +  ++           +P
Sbjct: 828 PILLKFAADSRQSNRKKCFHYEICWEREP 856


>gi|319649900|ref|ZP_08004051.1| hypothetical protein HMPREF1013_00655 [Bacillus sp. 2_A_57_CT2]
 gi|317398480|gb|EFV79167.1| hypothetical protein HMPREF1013_00655 [Bacillus sp. 2_A_57_CT2]
          Length = 261

 Score = 42.1 bits (97), Expect = 0.081,   Method: Composition-based stats.
 Identities = 46/279 (16%), Positives = 75/279 (26%), Gaps = 39/279 (13%)

Query: 4   VTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQET----KTEDKNFPFETLQSLN 54
           + + T N +S +      +I  LA  IKEN  D+I LQE     K          ++  N
Sbjct: 1   MKLLTLNCHSWQEDQQLEKIKILAEAIKENLYDVIALQEVSQHIKAP---LIDGHIREDN 57

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           Y +    +    GV    K    +      G D+  +   I     I             
Sbjct: 58  YALLLIEELRKIGV----KDYVFKWDFSHIGYDIYEEGLAIITRHEIKEDQSFFITKNRD 113

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII------PQPHDCYNPII 168
             +  T      K+    + + F S  L        +  + +       P+         
Sbjct: 114 QKHWKTRKIVGIKLLHQDKPISFYSCHLGWWHDQEESYRFQVESLLSKVPKDESAILMGD 173

Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD--SWSKNKG-IRIDH 225
           + + A    E              +            S          W  NK  +RID 
Sbjct: 174 FNSSAYVRNEGYDFLTGNGLYDTYELASRKD------SGVTVRGKIAGWENNKHDMRIDL 227

Query: 226 IMLSPEATSLLHSA---RIDTKPRGWTKPSDHTPVIVSL 261
           I+ +              I          SDH  V + +
Sbjct: 228 ILSAQPIQPKYSRVIFNGIHKPI-----ISDHYGVEIEI 261


>gi|302345504|ref|YP_003813857.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           melaninogenica ATCC 25845]
 gi|302149821|gb|ADK96083.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           melaninogenica ATCC 25845]
          Length = 258

 Score = 42.1 bits (97), Expect = 0.082,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 66/217 (30%), Gaps = 12/217 (5%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQP 76
           R  +L  +I    P+I   QE   +  +   + L S  Y I              + +  
Sbjct: 46  RCSHLCDFINFEQPEIFGTQEVLVDQLHDLMKGLDSYGY-IGVGRDDGKEKGEYAAIFYK 104

Query: 77  IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
              ++ L   +  +      A+   +   +RI               Y     +    + 
Sbjct: 105 KNQLSLLDSGNFWLSPTPERASLGWDAACIRICTWGKFQDKVSGKQFY-----FFNAHMD 159

Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIR 196
                   E   +     N + +         +  D    +    S   +    +T+A++
Sbjct: 160 HVGTVARRESARLILKRINQLSKGLPTILTGDFNVDQTDEIYQIFSNSGVLRDCYTNALQ 219

Query: 197 ATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
               T    ++ D+  DS SK    RIDHI +S +  
Sbjct: 220 RMTPTG---TWNDFMQDSRSK---SRIDHIFVSSDFK 250


>gi|237747027|ref|ZP_04577507.1| endonuclease/exonuclease/phosphatase [Oxalobacter formigenes
           HOxBLS]
 gi|229378378|gb|EEO28469.1| endonuclease/exonuclease/phosphatase [Oxalobacter formigenes
           HOxBLS]
          Length = 264

 Score = 42.1 bits (97), Expect = 0.082,   Method: Composition-based stats.
 Identities = 43/279 (15%), Positives = 82/279 (29%), Gaps = 41/279 (14%)

Query: 4   VTVATWNVN---SI--RARIHNLAAWIKENNPDIICLQETKTEDKNF---PFETLQSLNY 55
           + +AT+N++   SI  R  I  L   I+  + D+I LQE +              Q    
Sbjct: 3   LRIATYNIHKGASIDHRPVIQELKRSIRSLSADVIFLQEVQGRHDLMANRHALLWQDQGQ 62

Query: 56  HIE-------------TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN 102
           H                     ++G A+LS Y  +        D        +       
Sbjct: 63  HAYLAGSSLYCAYGKNAVYDYGHHGNALLSAYPIVSQYNTDVSDHALESRGILHCVLQTP 122

Query: 103 TQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD 162
              +    ++L   N     +    I  ++R     +  +   +   +  + + + +   
Sbjct: 123 ETKVYCYVIHLGLFNGSRVRQTHALIDTVQRSAPNDAPVIIAGDFNDWNNNLSDLLRKTL 182

Query: 163 CYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR 222
               +    D     E R+     +  G             L+ F+             R
Sbjct: 183 RVKEVF---DEMAEREERKKSFFPRLTGKVPKPLPARTFPALFPFF-------------R 226

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           +D I +          +    +   WT  SDH P++ SL
Sbjct: 227 LDRIYV----RGFQVDSACVMQGSPWTALSDHAPLVASL 261


>gi|147800480|emb|CAN68584.1| hypothetical protein VITISV_043904 [Vitis vinifera]
          Length = 1283

 Score = 42.1 bits (97), Expect = 0.083,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 23/61 (37%), Gaps = 9/61 (14%)

Query: 201 THHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
               Y++          N+   R+D  +++P       S+ I    R     SDH PV++
Sbjct: 665 QGGGYTW-----SGGPNNQSWARLDRFLVTPCWLDQF-SSVIQK--RLSXPVSDHFPVLL 716

Query: 260 S 260
            
Sbjct: 717 E 717


>gi|254414082|ref|ZP_05027850.1| endonuclease/exonuclease/phosphatase family [Microcoleus
           chthonoplastes PCC 7420]
 gi|196179218|gb|EDX74214.1| endonuclease/exonuclease/phosphatase family [Microcoleus
           chthonoplastes PCC 7420]
          Length = 316

 Score = 42.1 bits (97), Expect = 0.083,   Method: Composition-based stats.
 Identities = 39/287 (13%), Positives = 70/287 (24%), Gaps = 38/287 (13%)

Query: 2   SVVTVATWNVNSIRA-----RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56
           S + VA++NV S  A        ++       + DI    E + E      E       +
Sbjct: 34  SQLKVASFNVESGDAVPSVIARKHIGPL---EDIDIWGFSEVQNESWLLDLEQGTEDGEN 90

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
            +        G            +                          R         
Sbjct: 91  ADFKTILGSTGRGDRLAIAYNSNLLEEVKHYELDDINIGGRVRAPLVAQFRFKPTGEEFL 150

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
             +       + S  ++           E P+I AGDYN         +   W+      
Sbjct: 151 FVVNHLYRSSESSRHEQAQLLNEWGRSQELPIIAAGDYNFDWDVVSGVHDEGWDFLTADD 210

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
           +       KL     +D   +                         +D + ++ EA +  
Sbjct: 211 VFTWVKPDKLVATLCSDRYDSV------------------------LDFVFVAGEAKNWS 246

Query: 237 HSARIDTKPRGWTK------PSDHTPVIVSLDIPEPRKKQQDSTSQN 277
            S+ I                SDH P++ +  + E  +    S  Q 
Sbjct: 247 ASSVILYSEPSDAYCPDDKTTSDHRPILATFQLEELVEPTPPSREQR 293


>gi|326433914|gb|EGD79484.1| hypothetical protein PTSG_12983 [Salpingoeca sp. ATCC 50818]
          Length = 504

 Score = 42.1 bits (97), Expect = 0.084,   Method: Composition-based stats.
 Identities = 46/285 (16%), Positives = 84/285 (29%), Gaps = 47/285 (16%)

Query: 17  RIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYH--------IETCGQKSYNG 67
           R   +   +  +  DI+CLQE  K+E   +    LQ   YH              ++ +G
Sbjct: 223 RKGKILTELANSKCDILCLQEVSKSEFYQYFLGQLQKEGYHGAFKVKTRAAYQADETIDG 282

Query: 68  VAILSKYQPIEIVTHL--------------------PGDDLDVQARFIEATFTINTQTLR 107
            A     +  +++                            D  A F      +  + + 
Sbjct: 283 CATFYSTKTYKMLYEHGIDLQQLSVANSNGCNTVIDRCMPKDNVALFTVFEHAVTKKRVF 342

Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC---Y 164
           + NL+L      +  K    +  +K    F  +   L+ P++  GD+N +P         
Sbjct: 343 VANLHLTWDPHFSDVKVVQIVLALKAIREFLQENKLLDVPVMLMGDFNSMPDSGVYEFLA 402

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRID 224
              I  N         ++F           +R+ + T   Y+        +    GI ID
Sbjct: 403 TGKINPNHPDMQGYDYKAFFDSVGTTHPFKLRSAYTTEMQYT---NKTAGF---VGI-ID 455

Query: 225 HIMLSP-EATSLLHSARIDTKPRGWTKP-------SDHTPVIVSL 261
           +I  +            +D                SDH  +   L
Sbjct: 456 YIWYTEGSLLPQAVWGPVDESYMDRVSGCPNPHFSSDHLALGAKL 500


>gi|156381859|ref|XP_001632273.1| predicted protein [Nematostella vectensis]
 gi|156219326|gb|EDO40210.1| predicted protein [Nematostella vectensis]
          Length = 215

 Score = 42.1 bits (97), Expect = 0.085,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 29/99 (29%), Gaps = 5/99 (5%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL---NYHIETCGQKSYNGVAILSK 73
           R  NL   I   N DI+CLQE   E ++F       L    Y      +         + 
Sbjct: 31  RKKNLLKEILHCNADILCLQEV--ESEHFDNWFFPELCKAGYKGFYKKRTGKKSDGCATF 88

Query: 74  YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           Y+       L  +    +   +          + +   Y
Sbjct: 89  YKKSRFHHLLTQEVEFCRKDILVMDRDNVALIVVLRPRY 127


>gi|116198337|ref|XP_001224980.1| hypothetical protein CHGG_07324 [Chaetomium globosum CBS 148.51]
 gi|88178603|gb|EAQ86071.1| hypothetical protein CHGG_07324 [Chaetomium globosum CBS 148.51]
          Length = 261

 Score = 42.1 bits (97), Expect = 0.085,   Method: Composition-based stats.
 Identities = 30/251 (11%), Positives = 58/251 (23%), Gaps = 35/251 (13%)

Query: 32  IICLQET-KTEDKNFPFETLQSLN--------------YHIETCG--QKSYNGVAILSKY 74
            +CLQE   ++  +       S                Y            +        
Sbjct: 23  FVCLQEVLHSQLTDIQARLGPSWGRIGQGREDGKEAGEYSSIFFRADHWECDRSRTYWLS 82

Query: 75  QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRF 134
              E+ +       +                + + + +  H   +   +    +  + R 
Sbjct: 83  PTPEVSSKGWDAAFERVVTIGSFRHKRTGAVVVVMSTHFDHEGEVAREQSAHLLLKLART 142

Query: 135 LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDA 194
                   +L  P+ F GD+N  P                    +  +  K  N   T  
Sbjct: 143 W-CGEGAFDLSAPVFFGGDFNSTPTGRAYKVLTEPGIGMKDIFNILPADAKYGNEEITFT 201

Query: 195 IRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRG-WTKPSD 253
                   H                  RID + +    +    S  I           SD
Sbjct: 202 SFGDDPNQHP----------------ARIDFLFVRDLGSLRFLSFSILPNRFDEGVYLSD 245

Query: 254 HTPVIVSLDIP 264
           H PV+  +++ 
Sbjct: 246 HRPVVADVEVS 256


>gi|87308119|ref|ZP_01090261.1| putative endonuclease/exonuclease/phosphatase family protein
           [Blastopirellula marina DSM 3645]
 gi|87289201|gb|EAQ81093.1| putative endonuclease/exonuclease/phosphatase family protein
           [Blastopirellula marina DSM 3645]
          Length = 306

 Score = 42.1 bits (97), Expect = 0.085,   Method: Composition-based stats.
 Identities = 42/283 (14%), Positives = 74/283 (26%), Gaps = 41/283 (14%)

Query: 16  ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI---------------ETC 60
           +R   LAA IK+   D+I +QE            L +L  +                   
Sbjct: 26  SRHDELAAVIKQTQADVIGVQE-----DTSSDRLLTALGDNWRRAGSIYSKYPLTPISVD 80

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG---N 117
              +   V + S    + + TH             +       Q   +    +  G   N
Sbjct: 81  RLPTVCRVHLPSGDSIVIVNTHWRPGPYGPYDIQKDIRQNGAPQNFDLWEQQILDGCDKN 140

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
                  +   +         +  L  +       D+            +          
Sbjct: 141 HGARGYQETVDTIQSYVAAGETVILTGDFNEPSHLDWTKRAAEQGLDRWVENPTHVPLRF 200

Query: 178 EV-RQSFQKLQNMGFTDAIRATHDTHHL---YSF-WDYYAD--SWSKNKGI---RIDHIM 227
            +  +  Q L+  G  DA R            ++   Y A       N      RID + 
Sbjct: 201 AIAWRGSQMLEQAGMRDAYRTAFPDEVEKPGLTWTPTYPAGTPGRHPNADRVLDRIDMVY 260

Query: 228 LSPEATSLLHSARIDTK-------PRGWTKPSDHTPVIVSLDI 263
            +  A   ++ A +  +             PSDH  V+V  +I
Sbjct: 261 FT-GANLRVNDAAVVGESAAFSEIVFPGEWPSDHRAVLVEFEI 302


>gi|242788658|ref|XP_002481265.1| hypothetical protein TSTA_040250 [Talaromyces stipitatus ATCC
           10500]
 gi|218721412|gb|EED20831.1| hypothetical protein TSTA_040250 [Talaromyces stipitatus ATCC
           10500]
          Length = 633

 Score = 42.1 bits (97), Expect = 0.085,   Method: Composition-based stats.
 Identities = 36/257 (14%), Positives = 68/257 (26%), Gaps = 19/257 (7%)

Query: 26  KENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPG 85
           +     +I +QE    + N       SL + +        N     +K   + +  +   
Sbjct: 276 RALRASVIAIQEPWRNELNNTTHQPASLTHQLLYPKPNDNNDNTNNNKRARMALFVNKSI 335

Query: 86  DDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELE 145
           +        I   + I    +        + N      Y   I    R   F     EL 
Sbjct: 336 NPASWSHTVISPDYQIL--HIHYQRCLHSNSNSEPHDLYIHNIYNEPRSTTFTHIDRELT 393

Query: 146 EPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY 205
                    +I+    +  +   W        E      ++ +    +          L 
Sbjct: 394 RLGCSQTTAHIVLGDMN-AHHPAWGGPGTKIDEQATELLEIMDRHGIELAT----EEGLV 448

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP-SDHTPVIVSLDIP 264
           ++      S S      ID   LS      L    +  +     +  SDH P+ + +DI 
Sbjct: 449 TW--ERGQSQST-----IDLTFLSTTLFHRL----VLHERADEIQHDSDHWPIRMQIDID 497

Query: 265 EPRKKQQDSTSQNMKPI 281
            P  +     +     I
Sbjct: 498 TPTHEPPRRRNWAAIDI 514


>gi|150376190|ref|YP_001312786.1| endonuclease/exonuclease/phosphatase [Sinorhizobium medicae WSM419]
 gi|150030737|gb|ABR62853.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium medicae WSM419]
          Length = 242

 Score = 42.1 bits (97), Expect = 0.085,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 22/43 (51%), Gaps = 3/43 (6%)

Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +RIDH+++       + S ++ +        SDH P++  LD+
Sbjct: 201 LRIDHVLIGDCIE--VVSCQVHSSALAR-SASDHLPLLTELDV 240



 Score = 37.1 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 5/40 (12%)

Query: 4  VTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQET 38
          +   T+NV+S      +     +AA I E  PD+I LQE 
Sbjct: 5  IRFLTYNVHSCFGTDRKLDPARIAAVIAECRPDVIALQEV 44


>gi|310790394|gb|EFQ25927.1| endonuclease/Exonuclease/phosphatase [Glomerella graminicola
           M1.001]
          Length = 307

 Score = 42.1 bits (97), Expect = 0.087,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 23/58 (39%), Gaps = 6/58 (10%)

Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL--LHSARIDTKPRGWTKPSDHTPVI 258
             Y+ +D        N   RID I L P++ +   +    I +        SDH PV+
Sbjct: 247 GTYTTFDTSLQ----NSASRIDFIWLGPQSANKYSVQKIEIKSNIASGVVISDHRPVV 300


>gi|223996013|ref|XP_002287680.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220976796|gb|EED95123.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 453

 Score = 42.1 bits (97), Expect = 0.087,   Method: Composition-based stats.
 Identities = 41/291 (14%), Positives = 86/291 (29%), Gaps = 34/291 (11%)

Query: 4   VTVATWNVNS-----------IRA-RIHNLA--AWIKENNPDIICLQETKTEDKNFPFET 49
           ++V +WN++S           +R+ R   L     I+   PD+I LQET   ++      
Sbjct: 36  LSVVSWNISSAQPSQLAPNIALRSQRAPGLIRDECIRSL-PDVIALQETSHPNQGTDMFG 94

Query: 50  LQSLNY-HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108
             S  Y ++    Q +++    +      E+ +H    +L             N   + +
Sbjct: 95  TGSTGYSYVSIGTQVAHHTAEYVDLLVKRELYSHCQTINLQNLPAVAATINLPNGTRIAV 154

Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168
            +L+      +  T                    ++   +I  GD+N+          ++
Sbjct: 155 ASLH------LPHTSQAAPERKRMCEAIMKGIVSQVGNNIILLGDFNMRKAEDKPTEGLV 208

Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
                     V  S +       +         +  ++       +      +R +  ++
Sbjct: 209 GGGWMDAWKVVTNSDKSRNFTWNSHDNLYHGPDNFQFTCRFDRCYARGAKLALR-EFQLI 267

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMK 279
                         T        SDH  + V LDI      QQ   +   +
Sbjct: 268 GNN-----------TVEGKGDYLSDHFGLAVRLDIANDPSNQQSVQAAGAQ 307


>gi|154491719|ref|ZP_02031345.1| hypothetical protein PARMER_01330 [Parabacteroides merdae ATCC
           43184]
 gi|154087960|gb|EDN87005.1| hypothetical protein PARMER_01330 [Parabacteroides merdae ATCC
           43184]
          Length = 287

 Score = 42.1 bits (97), Expect = 0.087,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 67/269 (24%), Gaps = 28/269 (10%)

Query: 4   VTVATWNVNSIRA------------RIHNLAAWIKENNPDIICLQETKTEDKNFP--FET 49
           + V ++N   IR             R    A  IK  + D+   QE            + 
Sbjct: 27  MNVMSFN---IRMSTKSDGANWWEYRKDLAANVIKFYDVDMFGAQEV--LHNQLTDLLDR 81

Query: 50  LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
           L    Y           G      Y+         G+    +          +    R+ 
Sbjct: 82  LPDYGYVGVGREDGKTKGEYSPILYRKDRFSVVKSGNFWLAEDMNAVGKKGWDAACERVA 141

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
              +          +     ++   L    Q    E   +      ++ +         +
Sbjct: 142 TWAIFKDKKSGKEFF-----FLNTHLDHMGQVARHEGASLVLKQVKLLSRNLPVIVTGDF 196

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
                       + +K           A       ++F DY       ++ + ID+I + 
Sbjct: 197 NAVPTDDPIKVLTDEKDPRHLTHARTLAPLCYGPEWTFHDY--GRVPLDERVWIDYIFVK 254

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVI 258
                 +    +  +      PSDH PVI
Sbjct: 255 GNV--KVLRHGVLAESLDNLYPSDHCPVI 281


>gi|269218137|ref|ZP_06161991.1| endonuclease/exonuclease/phosphatase [Actinomyces sp. oral taxon
          848 str. F0332]
 gi|269212265|gb|EEZ78605.1| endonuclease/exonuclease/phosphatase [Actinomyces sp. oral taxon
          848 str. F0332]
          Length = 261

 Score = 42.1 bits (97), Expect = 0.088,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 22/53 (41%), Gaps = 17/53 (32%)

Query: 4  VTVATWNVNSIRA-----------------RIHNLAAWIKENNPDIICLQETK 39
          + + ++NV S RA                  +   AA I +  PD++ LQE +
Sbjct: 1  MRLVSFNVQSGRANQSWGGAVLGDDAMNDAAVREAAAEIAQLKPDVLALQEVR 53


>gi|116192681|ref|XP_001222153.1| hypothetical protein CHGG_06058 [Chaetomium globosum CBS 148.51]
 gi|88181971|gb|EAQ89439.1| hypothetical protein CHGG_06058 [Chaetomium globosum CBS 148.51]
          Length = 715

 Score = 42.1 bits (97), Expect = 0.088,   Method: Composition-based stats.
 Identities = 39/273 (14%), Positives = 65/273 (23%), Gaps = 47/273 (17%)

Query: 9   WNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGV 68
           WN          L A ++E   D++ +QE                         +     
Sbjct: 310 WNTEG---NKQALEALLEEAQYDLMAIQE---------------------PWINQQTKST 345

Query: 69  AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKI 128
                 +   +        + V  +F    +   T        +   GN           
Sbjct: 346 YCPRGSKYHLVHKASGRAAIFVSRKFDTGQWEYETSEEHCKVWFPGLGNSGLELWSIYNP 405

Query: 129 SWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN 188
              K  L+    R      ++ AGD+N+       Y             E         +
Sbjct: 406 LEDKTLLQTLLSRPAPAYSVVLAGDFNL------HYPQWDRFGRYERKAEALLELALQWD 459

Query: 189 MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGW 248
           +                           + +   IDH   S        +     + RG 
Sbjct: 460 LDLRTPAGTITRAP----------QGAQRGRTSTIDHFWASVGL----QTTYYGLEYRGK 505

Query: 249 TKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
              SDH P I+  DI  P  +Q      N K +
Sbjct: 506 ---SDHYPQILEADIGGPLPQQTQPGGWNWKMM 535


>gi|325285062|ref|YP_004260852.1| Endonuclease I [Cellulophaga lytica DSM 7489]
 gi|324320516|gb|ADY27981.1| Endonuclease I [Cellulophaga lytica DSM 7489]
          Length = 1889

 Score = 42.1 bits (97), Expect = 0.088,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 8/60 (13%)

Query: 209  DYYADSWSKNKGIRIDHIMLSPEATSL--LHSARIDTKPRGWTKP---SDHTPVIVSLDI 263
            D+ +  + +N    IDHI ++ E        SAR+  +      P   SDH PV     +
Sbjct: 1545 DFRSYVFRENM---IDHITITNELNDNYIAESARVHYEFYDSDYPNTVSDHFPVSARFQL 1601


>gi|315128102|ref|YP_004070105.1| hypothetical protein PSM_A3040 [Pseudoalteromonas sp. SM9913]
 gi|315016615|gb|ADT69953.1| conserved hypothetical protein [Pseudoalteromonas sp. SM9913]
          Length = 887

 Score = 42.1 bits (97), Expect = 0.088,   Method: Composition-based stats.
 Identities = 45/336 (13%), Positives = 81/336 (24%), Gaps = 79/336 (23%)

Query: 4   VTVATWNV----NS-------------------IRARIHNLAAWIKENNPDIICLQETKT 40
           + VA++NV    N                    IR +   ++A I     D+I L E   
Sbjct: 461 LRVASFNVLNYFNGDGQGSGFPTSRGADSEVELIRQQAKLVSA-ISAMQADVIGLMEI-- 517

Query: 41  EDKNF-----------PFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLD 89
           E+  F                 S N +          G   ++                 
Sbjct: 518 ENDGFGEFSAVASLVNALNDADSQNQYAFVDFGVDKIGTDAITTALIYRADKVQQVGTAA 577

Query: 90  VQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLI 149
           +                   +L       +       K          A Q         
Sbjct: 578 ITTDAPFDYSNRAPIAQSFKSLETEEVFTVAVAHLKSKGGCGSATGGNADQNDGQACWNE 637

Query: 150 FAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQK------LQNMGFTDAIRATHDTHH 203
                           P   +++    +    ++          + G  + +        
Sbjct: 638 IRTAGANAFADWLNSKPTGVDDEDIILVGDMNAYAMEDPIRAFADKGLKNVVAELDGNTL 697

Query: 204 LYSF-WDYYADSWSKNKGIRIDHIMLSPEATSLLHSA---RIDTKP-------------- 245
            YS+ +   A S        +DH ++SP   + + SA    I+                 
Sbjct: 698 GYSYSFSGRAGS--------LDHALVSPSLLNKVVSATDWHINADEPISLDYNVEFKSDA 749

Query: 246 -------RGWTKPSDHTPVIVSLD---IPEPRKKQQ 271
                  +G  + SDH PVIV +    I  P  + +
Sbjct: 750 QQSTLYAQGPYRASDHDPVIVDIRSTIIAPPEPEPE 785


>gi|237730766|ref|ZP_04561247.1| conserved hypothetical protein [Citrobacter sp. 30_2]
 gi|226906305|gb|EEH92223.1| conserved hypothetical protein [Citrobacter sp. 30_2]
          Length = 253

 Score = 42.1 bits (97), Expect = 0.088,   Method: Composition-based stats.
 Identities = 28/251 (11%), Positives = 58/251 (23%), Gaps = 26/251 (10%)

Query: 15  RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN--YHIETCGQKSYNGVAILS 72
           R  +  L   ++    DI+CLQE            +++     H E      ++  A   
Sbjct: 27  RFILPELREAVRTVGADIVCLQEV-MGAHEAHSLHIENWPDTSHYEFLADTMWSDFAYGR 85

Query: 73  KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIK 132
                +               +     ++     R           ++   +   +    
Sbjct: 86  NAVYPQGHHGNAVLSRYPIEHYENRDVSVGASEKRGVLYCRIVPPMLSHPIHVMCVHLGL 145

Query: 133 RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192
           R     +Q   L + +    D   +    D  +     N                +    
Sbjct: 146 REAHRQAQLAMLADWVNALPDAEPVVIAGDFNDWRQTANRPLKAKAGLDEIFTRAHGRPA 205

Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPS 252
                                       +R+D I +     S   +       R W   S
Sbjct: 206 RTFPVQFPL-------------------LRLDRIYVKNANASTPTT----LALRHWRHLS 242

Query: 253 DHTPVIVSLDI 263
           DH P+   + +
Sbjct: 243 DHAPLSAEIHL 253


>gi|108757091|ref|YP_631342.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus
           xanthus DK 1622]
 gi|108460971|gb|ABF86156.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus
           xanthus DK 1622]
          Length = 427

 Score = 42.1 bits (97), Expect = 0.089,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 24/62 (38%), Gaps = 7/62 (11%)

Query: 220 GIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPR-KKQQDSTSQNM 278
           G R D++  SP     L    +D         SDH PV+   D+  P  K  + +     
Sbjct: 371 GKRFDNLYASPGLVPRL--FEVDRSTES----SDHQPVVAHYDVRTPGLKDGKPAPGTVQ 424

Query: 279 KP 280
           +P
Sbjct: 425 RP 426


>gi|16802368|ref|NP_463853.1| hypothetical protein lmo0323 [Listeria monocytogenes EGD-e]
 gi|224502384|ref|ZP_03670691.1| hypothetical protein LmonFR_07664 [Listeria monocytogenes FSL
           R2-561]
 gi|16409687|emb|CAD00850.1| lmo0323 [Listeria monocytogenes EGD-e]
          Length = 256

 Score = 42.1 bits (97), Expect = 0.089,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 30/93 (32%), Gaps = 3/93 (3%)

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230
            D     +        +       I   H    + SF D+       N+  +ID+I +S 
Sbjct: 166 GDFNTEPDTPTYNFITKKYQDAQLISQKHAKGPIGSFHDFRPL-RPINELEKIDYIFVSE 224

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           E    + +             SDH PV  +LD 
Sbjct: 225 EF--QVCTYETIVDEVDGFSASDHFPVTANLDW 255


>gi|256841497|ref|ZP_05547004.1| endonuclease/exonuclease/phosphatase [Parabacteroides sp. D13]
 gi|256737340|gb|EEU50667.1| endonuclease/exonuclease/phosphatase [Parabacteroides sp. D13]
          Length = 293

 Score = 42.1 bits (97), Expect = 0.090,   Method: Composition-based stats.
 Identities = 34/260 (13%), Positives = 85/260 (32%), Gaps = 29/260 (11%)

Query: 2   SVVTVATWNV--NSIRARIH--NLAAWIKENNPDIICLQETKTEDKN------FPFETLQ 51
           + V V+++N+  N++  ++     A  I+ +  DI+ +QE    +++       P E  +
Sbjct: 26  ATVKVSSFNIWLNTLGGKLPPSQTAKVIEASQTDIVGIQEGHIYEEDGIKHDHVP-EIAE 84

Query: 52  SLNYHIETCGQKSYN-------GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ 104
           SL +H+   G+  Y                  I++         +    +I         
Sbjct: 85  SLGFHLFNQGEGHYILSRYPVVDSTASRYGVKIQVGKDKFCWMFNCHLYYIPYQPYQLNG 144

Query: 105 TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
                  ++           + +   + R+ +   Q ++   P+   GD+N        +
Sbjct: 145 IPYGDYPFIDTEEEAVWFANEARREEVTRYQKDIQQVMKEGYPVFLTGDFNEP--SFLDW 202

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH---HLYSFWDYYADSWSKNKGI 221
                +           + +    +G  D+ R  H        Y++    ++    +   
Sbjct: 203 TQRAADAGIHKIKVEWPATKAFSEIGMNDSYRTIHPDEVSTPGYTWTPVPSEQEILD--- 259

Query: 222 RIDHIMLSPEATSLLHSARI 241
           R+D ++ S      +  + I
Sbjct: 260 RLDFVLYSG---CKVTDSFI 276


>gi|220920538|ref|YP_002495839.1| endonuclease/exonuclease/phosphatase [Methylobacterium nodulans
          ORS 2060]
 gi|219945144|gb|ACL55536.1| Endonuclease/exonuclease/phosphatase [Methylobacterium nodulans
          ORS 2060]
          Length = 259

 Score = 42.1 bits (97), Expect = 0.090,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 33/80 (41%), Gaps = 8/80 (10%)

Query: 5  TVATWNVNSIR---ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + +WN+  +R   A +  +AA I+   PD++ +QE   E  +          ++     
Sbjct: 25 KIISWNL--LRRSGATVEAVAALIEHEKPDLLLMQEATVEITDLQERVG---GHYAWAPL 79

Query: 62 QKSYNGVAILSKYQPIEIVT 81
           +  +G+A+ S    +    
Sbjct: 80 PRRIHGLAMWSPTPWLSTPR 99


>gi|147844534|emb|CAN79990.1| hypothetical protein VITISV_021024 [Vitis vinifera]
          Length = 1226

 Score = 42.1 bits (97), Expect = 0.090,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 22/60 (36%), Gaps = 7/60 (11%)

Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
               +++    +         R+D  M+SP       +    T+ R     SDH P+I+ 
Sbjct: 519 QGGSFTW----SGGLHNQAWARLDRFMVSPSWLDQFSNV---TQKRLSRPISDHFPIIIE 571


>gi|68063349|ref|XP_673675.1| exodeoxyribonuclease III [Plasmodium berghei strain ANKA]
 gi|56491699|emb|CAH95125.1| exodeoxyribonuclease III, putative [Plasmodium berghei]
          Length = 391

 Score = 42.1 bits (97), Expect = 0.090,   Method: Composition-based stats.
 Identities = 17/117 (14%), Positives = 32/117 (27%), Gaps = 1/117 (0%)

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
           I         +   +++      + L+         NII    +  N             
Sbjct: 43  ILCKYEFKHCTINDKYIVKKKNGIYLKYINEIFLSLNIILSKENLINIANNIGYTSPECC 102

Query: 179 VRQSFQKLQNMGFTDAIRATHD-THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
                  +      D     +   +  ++ WD Y  +   NKG RID+I +      
Sbjct: 103 NDFVNTLICEDNMIDIFSYLYPDMNGKFTCWDTYNPNRITNKGSRIDYIFVDRILFE 159


>gi|47096406|ref|ZP_00234000.1| endonuclease/exonuclease/phosphatase family protein [Listeria
           monocytogenes str. 1/2a F6854]
 gi|254900495|ref|ZP_05260419.1| hypothetical protein LmonJ_11794 [Listeria monocytogenes J0161]
 gi|254913554|ref|ZP_05263566.1| endonuclease/exonuclease/phosphatase family protein [Listeria
           monocytogenes J2818]
 gi|254937865|ref|ZP_05269562.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes F6900]
 gi|47015201|gb|EAL06140.1| endonuclease/exonuclease/phosphatase family protein [Listeria
           monocytogenes str. 1/2a F6854]
 gi|258610472|gb|EEW23080.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes F6900]
 gi|293591565|gb|EFF99899.1| endonuclease/exonuclease/phosphatase family protein [Listeria
           monocytogenes J2818]
          Length = 256

 Score = 42.1 bits (97), Expect = 0.090,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 30/93 (32%), Gaps = 3/93 (3%)

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230
            D     +        +       I   H    + SF D+       N+  +ID+I +S 
Sbjct: 166 GDFNTEPDTPTYNFITKKYQDAQLISQKHAKGPIGSFHDFRPL-RPINELEKIDYIFVSE 224

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           E    + +             SDH PV  +LD 
Sbjct: 225 EF--QVCTYETIVDEVDGFSASDHFPVTANLDW 255


>gi|325180657|emb|CCA15062.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 515

 Score = 42.1 bits (97), Expect = 0.090,   Method: Composition-based stats.
 Identities = 37/298 (12%), Positives = 72/298 (24%), Gaps = 40/298 (13%)

Query: 3   VVTVATWNV----------------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFP 46
           ++ V T+N+                + IR   + +   I   NPD   +QET   D    
Sbjct: 47  IMKVMTFNIRTDQAPEDAGGHCTQWDGIR--KNTVVQQITSQNPDFFGVQET--SDAQKG 102

Query: 47  FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
           F   Q L  +                                 +               +
Sbjct: 103 FLD-QQLGTYAAIGASSGSLNGISGEWNAIYHQKDIWAPIASGMFWLGPNPDVASVDWGM 161

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
                    G                R+    +   +     +       + Q  D    
Sbjct: 162 T-HYRTCVWGRFKHIPTGITVCVLNTRWETLGNDLAQNNGAKLIVQRLGSLCQQSDKAVV 220

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226
           ++ + +A  +    Q          +       D     +  D +            D I
Sbjct: 221 LLGDMNAKSSSPAVQYLLTQDLKDESVDPTFCGDLVSK-TCSDKF------------DFI 267

Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP-----EPRKKQQDSTSQNMK 279
           +    A      + +  +      PSDH  ++ S  +      +P  K ++ST+   K
Sbjct: 268 LHRLPAGVCAIESSVIRQQFNECYPSDHAVLVTSFCLAGDCCKKPDMKSKNSTTNADK 325


>gi|319899949|ref|YP_004159677.1| Endonuclease/exonuclease/phosphatase [Bacteroides helcogenes P
           36-108]
 gi|319414980|gb|ADV42091.1| Endonuclease/exonuclease/phosphatase [Bacteroides helcogenes P
           36-108]
          Length = 287

 Score = 42.1 bits (97), Expect = 0.090,   Method: Composition-based stats.
 Identities = 41/284 (14%), Positives = 79/284 (27%), Gaps = 54/284 (19%)

Query: 6   VATWNV---------NSIRARIHNLAAWIKENNPDIICLQET-----KTEDKNFP----- 46
           V ++N+         N+ R R   +A  I+  + D++  QE      K   +  P     
Sbjct: 31  VMSFNIRYDNPEDSLNNWRYRKDRVATAIRFYDTDLLGTQEVLHNQLKDLQECLPEYGVV 90

Query: 47  ---FETLQSLNYHIETCGQKSY-----NGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT 98
               E  +    +     +K       +G   LS+   +       G    + +      
Sbjct: 91  GVGREDGKEKGEYSALWYKKDRFVLLDSGNFWLSETPGVAGSKGWDGACERIASWAKLKD 150

Query: 99  FTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP 158
                +   +       G            S   R +      L    P+I  GD+N  P
Sbjct: 151 KVSGKEYFALNTHLDHVGVVA--------RSEGIRLILDRVDELSNGLPVIVTGDFNADP 202

Query: 159 QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN 218
           +     +     N    T    +S                         +D         
Sbjct: 203 ESDVIKHVTDPANPRHLTDARMESPVVYGPAWTFHDFGKIP--------YDQRPL----- 249

Query: 219 KGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
               ID++ +       +    +  +  G    SDH+PV+V+++
Sbjct: 250 ----IDYVFVRNGL--KVLRYGVLAETEGNAFLSDHSPVLVTVE 287


>gi|124359464|gb|ABN05905.1| reverse transcriptase, related [Medicago truncatula]
          Length = 328

 Score = 42.1 bits (97), Expect = 0.090,   Method: Composition-based stats.
 Identities = 19/197 (9%), Positives = 51/197 (25%), Gaps = 10/197 (5%)

Query: 71  LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISW 130
           ++    +            ++       F+I+   +RIG   +         +       
Sbjct: 1   MTYCPVLWCFCLHNLQLDVLEIDDQLVAFSISYNNIRIGISTVYASTTYIHRRLIWNKLQ 60

Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE----NDACFTLEVRQSFQKL 186
             +  +        +   I     +             ++    N+    L    +F   
Sbjct: 61  NIQNQQLIPWCFMGDFNSILGAHEHRGHCVPARAPMEEFQLSTNNNHLIHLPTAGAFFTW 120

Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR 246
           +               +  ++    + +   N   R+D  + +      + S    T  R
Sbjct: 121 RPGSGLSKPGLAWPIPNP-TWRSGRSGTR--NTERRLDRCICNQRWMDFVSSVNCSTLIR 177

Query: 247 GWTKPSDHTPVIVSLDI 263
                SDH P+++   +
Sbjct: 178 NQ---SDHYPILLYFQL 191


>gi|288928392|ref|ZP_06422239.1| endonuclease/Exonuclease/phosphatase [Prevotella sp. oral taxon 317
           str. F0108]
 gi|288331226|gb|EFC69810.1| endonuclease/Exonuclease/phosphatase [Prevotella sp. oral taxon 317
           str. F0108]
          Length = 321

 Score = 42.1 bits (97), Expect = 0.091,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 25/68 (36%), Gaps = 21/68 (30%)

Query: 223 IDHIMLSPEATSLLHSARI--------DTKPRGWTKP-------------SDHTPVIVSL 261
           +DH+ +S +      S  I        D +  G  +P             SDH PV+V+ 
Sbjct: 253 LDHVFVSQKIHEKGVSCHIFDAPFLMEDEEKYGGKRPWRTYQGPKYLGGFSDHLPVVVTF 312

Query: 262 DIPEPRKK 269
            +P    +
Sbjct: 313 GMPNAASR 320


>gi|260912305|ref|ZP_05918856.1| endonuclease/exonuclease/phosphatase family protein [Prevotella sp.
           oral taxon 472 str. F0295]
 gi|260633606|gb|EEX51745.1| endonuclease/exonuclease/phosphatase family protein [Prevotella sp.
           oral taxon 472 str. F0295]
          Length = 321

 Score = 42.1 bits (97), Expect = 0.091,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 26/69 (37%), Gaps = 21/69 (30%)

Query: 223 IDHIMLSPEATSLLHSARI--------DTKPRGWTKP-------------SDHTPVIVSL 261
           +DHI +S        S RI        D +  G  +P             SDH P++V+ 
Sbjct: 253 LDHIYVSRLLHEKGVSCRIFDAPFLLEDEEKYGGKRPWRTYQGPKYLGGFSDHLPLVVTF 312

Query: 262 DIPEPRKKQ 270
            +PE   K 
Sbjct: 313 GMPETTVKP 321


>gi|254430067|ref|ZP_05043774.1| endonuclease/exonuclease/phosphatase family [Alcanivorax sp. DG881]
 gi|196196236|gb|EDX91195.1| endonuclease/exonuclease/phosphatase family [Alcanivorax sp. DG881]
          Length = 300

 Score = 42.1 bits (97), Expect = 0.091,   Method: Composition-based stats.
 Identities = 43/286 (15%), Positives = 78/286 (27%), Gaps = 65/286 (22%)

Query: 3   VVTVATWNV-NSI--------------------RAR--IHNLAAWIKENNPDIICLQETK 39
            V + ++N+   I                    R+   I  +A  +  ++ D++ LQE  
Sbjct: 42  TVKLMSFNIQAGIGSQKFGDYITGSWKHLVAHPRSVETIEQIAEVL--SHFDVVGLQEV- 98

Query: 40  TEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF 99
             D                +   ++ N +  L+              +L    +F    F
Sbjct: 99  --DGG--------------SLRSRNMNQLVHLASMADFPFWHQQLNRNLGRLGQFSNG-F 141

Query: 100 TINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159
               Q   I +  LP      +             +  A   L  +           +  
Sbjct: 142 LSRHQPFEITDHRLPGLPGRGAIVIKYGHPIQPLVVVVAHLALGEKVRNTQLSYLARLLA 201

Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK 219
            +                +       L N         T    +L ++  +  D      
Sbjct: 202 DY---------KYVVMMGDFNCRLTHLDNSPLAALGLQTVQADNLNTYPSWAPD------ 246

Query: 220 GIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
              IDHI+LSP+  S     R+ T        SDH P+   + IP+
Sbjct: 247 -RHIDHILLSPDLESR--HTRVLTDCL----LSDHLPLATEIVIPD 285


>gi|147866083|emb|CAN84133.1| hypothetical protein VITISV_000111 [Vitis vinifera]
          Length = 1527

 Score = 42.1 bits (97), Expect = 0.091,   Method: Composition-based stats.
 Identities = 9/34 (26%), Positives = 19/34 (55%), Gaps = 2/34 (5%)

Query: 8   TWNVNSIRARIHN--LAAWIKENNPDIICLQETK 39
           +WN   + +      +  +++  NPD++ +QETK
Sbjct: 549 SWNAKGLGSSNKRRVIKDFLRSENPDVVMIQETK 582


>gi|197116747|ref|YP_002137174.1| endonuclease/exonuclease/phosphatase family protein [Geobacter
           bemidjiensis Bem]
 gi|197086107|gb|ACH37378.1| endonuclease/exonuclease/phosphatase family protein [Geobacter
           bemidjiensis Bem]
          Length = 343

 Score = 42.1 bits (97), Expect = 0.091,   Method: Composition-based stats.
 Identities = 39/264 (14%), Positives = 76/264 (28%), Gaps = 27/264 (10%)

Query: 4   VTVATWNVNSIRARIHNLAAW---IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           + V TWN   I+   H+L      ++ + PDI+  Q                  Y  +  
Sbjct: 95  LRVMTWN---IKYGKHDLMPLVEELERSRPDIVLFQ------DAVRAGAGPLAGY-FKDW 144

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
              S     I S+Y                +   +     + +  + + +++        
Sbjct: 145 HLLSQGRYLIASRYPLSAAEVFELPYSGRSKEYLLRCKVRVGSSEISLYDVHFKTPRRSL 204

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
           +     K      ++  A +R E    L       +         P++   D        
Sbjct: 205 NAF--RKAKQGPWYIPDAVERFEDNVTLRLIQARTVAGYLSREKGPVLVAGDLNSPDSS- 261

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS---KNKGIRIDHIMLSPEATSLLH 237
               +           A     + Y++  +   +     +   +RIDH+M +   T    
Sbjct: 262 -LVCRTLREAGLADAFAAAGEGYGYTYGHFLLKNRIPLLRVSWMRIDHVMTNSWLT--AS 318

Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261
             R+     G  + SDH PVI   
Sbjct: 319 RCRV-----GTGRASDHRPVIADF 337


>gi|313158021|gb|EFR57427.1| endonuclease/exonuclease/phosphatase family protein [Alistipes sp.
           HGB5]
          Length = 279

 Score = 42.1 bits (97), Expect = 0.092,   Method: Composition-based stats.
 Identities = 38/288 (13%), Positives = 72/288 (25%), Gaps = 60/288 (20%)

Query: 4   VTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNF--------- 45
           ++V T+N+         N+ R R   +A  IK    D++  QE       F         
Sbjct: 22  LSVMTFNMRYDNPEDGQNNWRFRRERVAGVIKAQEVDVLGTQE--LLSNQFNDLSGLLTG 79

Query: 46  -------PFETLQSLNYHIETCGQKSY---NGVAILSKYQPIEIVTHLPGDDLDVQARFI 95
                    + ++S  Y      +  +   +         P  + +       +  A ++
Sbjct: 80  YQGVGVGRLDGVESGEYCAVFFRKDRFTLLDSGTFWLSETPEVVGSLGWDGACERIATWV 139

Query: 96  EATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYN 155
                   +   I       G                  L    + L    P+I  GD+N
Sbjct: 140 VLRDRDGREFFFIDTHLDHVGQVA--------RDEGVSLLMKRIETLSGGRPVILTGDFN 191

Query: 156 IIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW 215
             P      +      D         + Q+              +               
Sbjct: 192 SEPGSSVVAHVQ---KDGVLRDAKAIAAQRSGTDWSFSDFGQIPEAERPL---------- 238

Query: 216 SKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                  +D+I +S +         +          SDH PV+  + I
Sbjct: 239 -------LDYIFVSGDIE--AVRYEVLPDTFDGGYVSDHAPVMAVVKI 277


>gi|217965584|ref|YP_002351262.1| endonuclease/exonuclease/phosphatase family protein [Listeria
           monocytogenes HCC23]
 gi|217334854|gb|ACK40648.1| endonuclease/exonuclease/phosphatase family protein [Listeria
           monocytogenes HCC23]
 gi|307569865|emb|CAR83044.1| endonuclease/exonuclease/phosphatase family protein [Listeria
           monocytogenes L99]
          Length = 256

 Score = 42.1 bits (97), Expect = 0.092,   Method: Composition-based stats.
 Identities = 35/271 (12%), Positives = 71/271 (26%), Gaps = 26/271 (9%)

Query: 3   VVTVATWNVN---------SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + +V T+N+          S   R     + + +   D + ++E     +    + +   
Sbjct: 1   MFSVTTFNIRFDDTSERKKSWELRKTLTKSLLDKYQWDFMGVEE-PLLPQMLDMKAMLDW 59

Query: 54  NYH-IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           +Y  +             +        +       L           T     + +   +
Sbjct: 60  DYFGVGRDDGLEKGEFTAVFYNSTRFTLLQEGHFWLSDTPDVPSIHSTAMFPRICVWGKF 119

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                              +    FASQ L  +  +I      I+    +        N 
Sbjct: 120 ADSDGKQFYLFNTHLDHISEEARLFASQLLLKKAAIIAENSPVIVLGDFNTQPNTPTYNY 179

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                +  Q   +    G T      H                 +N+  +ID+I +S E 
Sbjct: 180 ITEKYQDAQLISQKPAKGPTGCFHDFHPL-------------RPENELEKIDYIFVSNEF 226

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              +++             SDH PV  +LD 
Sbjct: 227 --QVNTYETIVDEVDGFSASDHFPVTANLDW 255


>gi|260808289|ref|XP_002598940.1| hypothetical protein BRAFLDRAFT_221680 [Branchiostoma floridae]
 gi|229284215|gb|EEN54952.1| hypothetical protein BRAFLDRAFT_221680 [Branchiostoma floridae]
          Length = 114

 Score = 42.1 bits (97), Expect = 0.093,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 2  SVVTVATWNVNSI--RARIHNLAAWIKENNPDIICLQETKTEDK 43
          + +++ + NV  +  + +  +L +++K    DII LQET    +
Sbjct: 1  NDISLLSLNVRGLLEKNKRRSLLSYVKNQKADIIFLQETHFTAE 44


>gi|260593422|ref|ZP_05858880.1| AP endonuclease domain protein [Prevotella veroralis F0319]
 gi|260534698|gb|EEX17315.1| AP endonuclease domain protein [Prevotella veroralis F0319]
          Length = 367

 Score = 42.1 bits (97), Expect = 0.094,   Method: Composition-based stats.
 Identities = 40/276 (14%), Positives = 74/276 (26%), Gaps = 38/276 (13%)

Query: 4   VTVATWNVNSIRARIHN------LAAWIKENNPDIICLQETKTE---DKNFPFETLQSLN 54
           + V ++NV    +          +  +I ++  D++CLQE   +   DKN         +
Sbjct: 102 IKVLSYNVYMFDSWEETNPKTNPIVNYIIDSKADLVCLQE--AQGDGDKNGGIYKRLKAH 159

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           Y       K   G   +       I+            + +     I      + N +  
Sbjct: 160 YPYFKLMVKKKPGADYMVLLSRYPILWQDTIPYGSSSNQSVAYMVDIKGTKTLVVNNHFE 219

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQ---RLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
                   K   K     R     ++      L +    +            Y     + 
Sbjct: 220 SNGLSNDDKAGFKSLVKGRMRTNKAKSESVHLLRKLGKVSMRRAPQADMVARYVKQYLDK 279

Query: 172 DACFTLEVRQ------SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI--RI 223
                L             ++ +    D   A+ +   +     Y+        G+  RI
Sbjct: 280 KVPIILCGDFNDNPLSYTHRVIDKELIDCFVASGNGPGI----SYHR------SGMYFRI 329

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
           DHI  S +       A +D         SDH P+  
Sbjct: 330 DHIFCSDDFEPY--DAHVDNSVT----ASDHYPIYC 359


>gi|126665590|ref|ZP_01736572.1| Endonuclease/exonuclease/phosphatase [Marinobacter sp. ELB17]
 gi|126630218|gb|EBA00834.1| Endonuclease/exonuclease/phosphatase [Marinobacter sp. ELB17]
          Length = 536

 Score = 42.1 bits (97), Expect = 0.094,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 26/73 (35%), Gaps = 22/73 (30%)

Query: 207 FWDYYADSWSKNKGIR--IDHIMLSPEATSLLHSARIDT---------KPRGWTKP---- 251
            + Y        KG R  +DH + S      + SA++             R  + P    
Sbjct: 470 HYSYRF------KGARGSLDHALASAALKPRVLSAKVWNINADQPRIADYRSHSSPQPWR 523

Query: 252 -SDHTPVIVSLDI 263
            SDH P+I  + +
Sbjct: 524 SSDHNPLITDIKL 536


>gi|221633952|ref|YP_002523178.1| putative endonuclease/exonuclease/phosphatase family protein
           [Thermomicrobium roseum DSM 5159]
 gi|221156684|gb|ACM05811.1| putative endonuclease/exonuclease/phosphatase family protein
           [Thermomicrobium roseum DSM 5159]
          Length = 608

 Score = 42.1 bits (97), Expect = 0.095,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 7/44 (15%)

Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
            RID++ ++ E   L  S             SDH PV+V L +P
Sbjct: 572 RRIDYLFITDELRPLAGSV-------PPISASDHRPVVVRLALP 608


>gi|125606578|gb|EAZ45614.1| hypothetical protein OsJ_30281 [Oryza sativa Japonica Group]
          Length = 1068

 Score = 42.1 bits (97), Expect = 0.095,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 26/59 (44%), Gaps = 7/59 (11%)

Query: 204 LYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP-SDHTPVIVSL 261
            Y++ D   +    N  +R+D ++       +  ++++       T P SDH P++V  
Sbjct: 413 PYTY-DNRREGR-NNVKVRLDRVLADNSWRDIFSNSQVVH----MTSPCSDHCPILVRF 465


>gi|134083|sp|P21328|RTJK_DROME RecName: Full=RNA-directed DNA polymerase from mobile element
           jockey; AltName: Full=Reverse transcriptase
 gi|157825|gb|AAA28675.1| ORF2, reverse transcriptase (put.); putative [Drosophila
           melanogaster]
          Length = 916

 Score = 42.1 bits (97), Expect = 0.095,   Method: Composition-based stats.
 Identities = 31/263 (11%), Positives = 64/263 (24%), Gaps = 50/263 (19%)

Query: 3   VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
            + +  WN   +      L  ++ +++ D++   ET           +    Y +     
Sbjct: 5   TLKIGLWNARGLTRGSEELRIFLSDHDIDVMLTTETHMRVGQ----RIYLPGYLMYHAHH 60

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
            S N     +      +             +        +  T+ +  +YLP        
Sbjct: 61  PSGNSRGGSAVIIKSRLCHSPLTPISTNDRQIARVHLQTSVGTVTVAAVYLPPAERWIVD 120

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
            +              S    L    I  GDYN             W  +       +  
Sbjct: 121 DF-------------KSMFAALGNKFIAGGDYNAKHA---------WWGNPRSCPRGKML 158

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI- 241
            + + +  +              +F+ Y                +L+P A     +    
Sbjct: 159 QEVIAHGQYQVLAT------GEPTFYSYNP--------------LLTPSALDFFITCGYG 198

Query: 242 ---DTKPRGWTKPSDHTPVIVSL 261
                        SDH P++  L
Sbjct: 199 MGRLDVQTLQELSSDHLPILAVL 221


>gi|288929073|ref|ZP_06422919.1| endonuclease/exonuclease/phosphatase family protein [Prevotella sp.
           oral taxon 317 str. F0108]
 gi|288330057|gb|EFC68642.1| endonuclease/exonuclease/phosphatase family protein [Prevotella sp.
           oral taxon 317 str. F0108]
          Length = 313

 Score = 42.1 bits (97), Expect = 0.096,   Method: Composition-based stats.
 Identities = 35/277 (12%), Positives = 72/277 (25%), Gaps = 57/277 (20%)

Query: 21  LAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEI 79
           +A  +  ++PD    QE  K +  +     L   +Y +       +        +   + 
Sbjct: 58  IADQLNYHHPDAFGAQEVLKGQLDDL-LRALPDYDY-VGVGRDDGHEAGEYAPIFYRRDR 115

Query: 80  VTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFAS 139
           +  L      +   +   +   +   +RI                   +      ++   
Sbjct: 116 LDKLSDGYFWLSPTYTTPSLGWDAACIRICTWAKFRVRESGEVFLFFNLHTDHVGVKARR 175

Query: 140 QRLE-----------LEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN 188
           +  +            + P++  GD+N+                A        +  +   
Sbjct: 176 ESAKLVMKAIDGLGGKDMPVVLTGDFNVDQTDETYAIFTAN---ARLNDAYVVAKHRFAE 232

Query: 189 MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT--------------- 233
            G  ++   T  T                    RIDH+ +SP                  
Sbjct: 233 NGTFNSFDPTLKTT------------------SRIDHVFVSPRFAVARYGVLPNFYWTEE 274

Query: 234 -----SLLHSA--RIDTKPRGWTKPSDHTPVIVSLDI 263
                     A  +ID K       SDH PV V +++
Sbjct: 275 PAAKSQKGQDAPQQIDFKQHRIRTASDHYPVFVEVNL 311


>gi|330805758|ref|XP_003290845.1| hypothetical protein DICPUDRAFT_155390 [Dictyostelium purpureum]
 gi|325079008|gb|EGC32630.1| hypothetical protein DICPUDRAFT_155390 [Dictyostelium purpureum]
          Length = 77

 Score = 42.1 bits (97), Expect = 0.097,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 1/40 (2%)

Query: 1  MSVVTVATWNVNS-IRARIHNLAAWIKENNPDIICLQETK 39
             + + ++N+N    +++ N+     + N  IICLQETK
Sbjct: 34 FKNLNILSFNINGDFTSKLKNIIKLSIKKNIKIICLQETK 73


>gi|331230830|ref|XP_003328079.1| hypothetical protein PGTG_09373 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309307069|gb|EFP83660.1| hypothetical protein PGTG_09373 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 532

 Score = 42.1 bits (97), Expect = 0.097,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 71/261 (27%), Gaps = 35/261 (13%)

Query: 31  DIICLQETKTEDKNFPFETLQSLN---YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDD 87
           DI+ LQE                    Y          +G+AILS++  I    H    +
Sbjct: 102 DIVALQELWVYHDFLVIRDRAKEGGFKYSKWFHSAALGSGLAILSRFPIISSHFHPYLLN 161

Query: 88  LDVQARFIEATF-------------TINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRF 134
                      F             T+    +   +LY PH  P    K   + +     
Sbjct: 162 GHPLHFIQGDFFVGKSVGSCLLDVPTVGEVEVFTTHLYAPHDVPAPEWKRAHRTAQAWEL 221

Query: 135 LRFASQRLELEEPLIFAGDYNIIPQPHDCYN-------PIIWENDACFTLEVRQSFQKLQ 187
            +      E    +   GD N +P                 W       L    + +   
Sbjct: 222 AKLVRASAERGRTVFVCGDLNSVPSSLPITLLQSYGQLRDSWIASHPNGLSTISTNEMTY 281

Query: 188 NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS--------LLHSA 239
                +         + ++     A+  +K  G R+D+I+  P A             + 
Sbjct: 282 RTAIQEEGITCDSLINTFTASKNAANRGAKGYGKRLDYILYRPAAKRLTRRDRLGRCQTE 341

Query: 240 RIDTKPRGWTKPSDHTPVIVS 260
            ID +        DH  VI++
Sbjct: 342 FIDDQNITC----DHCAVILT 358


>gi|56477773|ref|YP_159362.1| endonuclease / exonuclease / phosphatase family protein
           [Aromatoleum aromaticum EbN1]
 gi|56313816|emb|CAI08461.1| predicted endonuclease / exonuclease / phosphatase family protein
           [Aromatoleum aromaticum EbN1]
          Length = 250

 Score = 42.1 bits (97), Expect = 0.098,   Method: Composition-based stats.
 Identities = 28/280 (10%), Positives = 73/280 (26%), Gaps = 51/280 (18%)

Query: 1   MSVVTVATWNVN-SI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           M  + V T+N++        R  +H L   ++  + D++ LQE              +L+
Sbjct: 1   MPALRVCTYNIHKGFSQFNRRMVVHELRERLRTLDVDVVFLQEV-----QGLHLGHANLH 55

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
            +     Q  +    + S++       +  G   +                  I +    
Sbjct: 56  PNWPGSPQHEFLAEDVWSQFAYGGNAVYDHGHHGNAVLSRYP-----------IVSSMNQ 104

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
             +     +       ++                + AG               +    A 
Sbjct: 105 DVSDHRFERRGILHCEVEVPGIGEPVHCVCAHLGLMAGSRRRQMGALAERMEQVAPGGAP 164

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG------------IR 222
             +    +  + +            +             ++ + +G            + 
Sbjct: 165 LIIAGDFNDWRNRAAQLLGRRLGLRE-------------AFDRGRGEPARSFPSTVPVLC 211

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
           +D I +       +  A++      W++ SDH  +   L+
Sbjct: 212 LDRIYVRGF---RVRQAQVHCG-LPWSRISDHAALTAELE 247


>gi|331662145|ref|ZP_08363068.1| putative cytoplasmic protein [Escherichia coli TA143]
 gi|331060567|gb|EGI32531.1| putative cytoplasmic protein [Escherichia coli TA143]
          Length = 253

 Score = 42.1 bits (97), Expect = 0.098,   Method: Composition-based stats.
 Identities = 31/251 (12%), Positives = 59/251 (23%), Gaps = 26/251 (10%)

Query: 15  RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN--YHIETCGQKSYNGVAILS 72
           R  +  L   ++  + DI+CLQE            +++     H E      ++  A   
Sbjct: 27  RFILPELRDAVRTVSADIVCLQEV-MGAHEVHPLHVENWPDTSHYEFLADTMWSDFAYGR 85

Query: 73  KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIK 132
                E               +     +++    R                +   +    
Sbjct: 86  NAVYPEGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVPPMTGKAIHVMCVHLGL 145

Query: 133 RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192
           R     +Q   L E +    D   +    D  +     N                +    
Sbjct: 146 REAHRQAQLAMLAEWVNELPDGEPVLVAGDFNDWRQKANHPLKVQAGLDEIFTRAHGRPA 205

Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPS 252
                                       +R+D I +     +   SA      R W   S
Sbjct: 206 RTFPVQFPL-------------------LRLDRIYV----KNASASAPTALPLRTWRHLS 242

Query: 253 DHTPVIVSLDI 263
           DH P+   + +
Sbjct: 243 DHAPLSAEIHL 253


>gi|295398413|ref|ZP_06808453.1| RgfB protein [Aerococcus viridans ATCC 11563]
 gi|294973366|gb|EFG49153.1| RgfB protein [Aerococcus viridans ATCC 11563]
          Length = 278

 Score = 42.1 bits (97), Expect = 0.098,   Method: Composition-based stats.
 Identities = 30/281 (10%), Positives = 66/281 (23%), Gaps = 30/281 (10%)

Query: 4   VTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQET-------KTEDKNFPFET 49
           + + T N +S        +     +A  I E + D++ LQE        + + KN     
Sbjct: 1   MKLLTLNTHSYGEENQDQKLAF--IAQSIAEWDIDVVGLQEVNQKIIGHRVDVKNIV--N 56

Query: 50  LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
              ++  +          +  L                +                   + 
Sbjct: 57  FVPMDGQVNVKEDNFAMRLVALLAELGKTYYWAWAMTHIAHDTMQEGVAILSKYPIDSVT 116

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
           +  +   +     K    ++         S          + G+ N              
Sbjct: 117 SYNVSKSHNWYDYKTRRILTAKITKPNGESFMAVSGHFSWWHGENNEEFHYEWQETEKYL 176

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK---GI----- 221
                    +          G+   +         Y+  +      +  K   G      
Sbjct: 177 TRTKLPIYFMGDFNNPAGTDGYDYMVSTAIPITDSYTIAEETVGGPTVLKEIGGWTGLKE 236

Query: 222 --RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
             RID+I +       +  + +          SDH+ V+V 
Sbjct: 237 QIRIDYIFVPKGVA--VKKSEVVFDGERQQAVSDHSGVLVE 275


>gi|147794985|emb|CAN76142.1| hypothetical protein VITISV_007730 [Vitis vinifera]
          Length = 728

 Score = 42.1 bits (97), Expect = 0.098,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 26/61 (42%), Gaps = 9/61 (14%)

Query: 201 THHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
               +++     +    N+   R+D  ++SP    + + A   T+ R     SDH P+++
Sbjct: 138 QGGEFTW-----NGGLNNQVWARLDRFLVSPTWLEMFNGA---TQIRLSRPISDHFPIVL 189

Query: 260 S 260
            
Sbjct: 190 E 190


>gi|99081700|ref|YP_613854.1| endonuclease/exonuclease/phosphatase [Ruegeria sp. TM1040]
 gi|99037980|gb|ABF64592.1| Endonuclease/exonuclease/phosphatase [Ruegeria sp. TM1040]
          Length = 344

 Score = 42.1 bits (97), Expect = 0.098,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 25/61 (40%), Gaps = 12/61 (19%)

Query: 223 IDHIMLSPEATSLLHSARI-----DTKPRGWT-------KPSDHTPVIVSLDIPEPRKKQ 270
           +D+IM+SP   +     RI     D    G           SDH PV + LD+ +  + +
Sbjct: 278 LDYIMISPPLQACAPRWRIWHPFEDAACYGTPSLCHALLTASDHFPVTLDLDLTQASRPE 337

Query: 271 Q 271
            
Sbjct: 338 D 338


>gi|270009208|gb|EFA05656.1| hypothetical protein TcasGA2_TC015867 [Tribolium castaneum]
          Length = 488

 Score = 42.1 bits (97), Expect = 0.099,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 16/39 (41%)

Query: 9   WNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPF 47
           WN N +RA    L  ++     DI+ + E      + P 
Sbjct: 410 WNANGLRAARDELEEFVDRLQLDIVLVCELVATSNDGPK 448


>gi|254574412|ref|XP_002494315.1| Mitochondrial membrane localized inositol phosphosphingolipid
          phospholipase C [Pichia pastoris GS115]
 gi|238034114|emb|CAY72136.1| Mitochondrial membrane localized inositol phosphosphingolipid
          phospholipase C [Pichia pastoris GS115]
          Length = 413

 Score = 42.1 bits (97), Expect = 0.099,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 25/53 (47%), Gaps = 11/53 (20%)

Query: 1  MSVVTVATWNVNSIR-------ARIHNLAAWIK---ENNPDIICLQETKTEDK 43
          MS + + T+N   ++        R+  +A  +    +++ DI+ LQE   ++ 
Sbjct: 1  MS-LKLLTFNTWGLKYVSKHRQERLRAIADELADDTKHDYDIVALQEVWCDED 52


>gi|168486747|ref|ZP_02711255.1| metal-dependent hydrolase [Streptococcus pneumoniae CDC1087-00]
 gi|168490847|ref|ZP_02714990.1| metal-dependent hydrolase [Streptococcus pneumoniae CDC0288-04]
 gi|183570235|gb|EDT90763.1| metal-dependent hydrolase [Streptococcus pneumoniae CDC1087-00]
 gi|183574548|gb|EDT95076.1| metal-dependent hydrolase [Streptococcus pneumoniae CDC0288-04]
          Length = 271

 Score = 42.1 bits (97), Expect = 0.10,   Method: Composition-based stats.
 Identities = 29/264 (10%), Positives = 70/264 (26%), Gaps = 14/264 (5%)

Query: 4   VTVATWNVNSI--RARIHNL---AAWIKENNPDIICLQETK-------TEDKNFPFETLQ 51
           +   T N +S   +            I E + ++IC QE          E  +       
Sbjct: 1   MKFLTLNTHSWMEKEAEEKFQILLEDILEKDYNLICFQEINQEMTSSEVEVNDLYQALPA 60

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
           + + H +   +     +    K        +  G D   +   I +   I  + + + ++
Sbjct: 61  AESIHQDHYVRLLVEKLLEQGKNYYWTWAYNHIGYDRYHEGVAILSKTPIEAREILVSDV 120

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
             P           + +   K     +      ++                    ++  +
Sbjct: 121 DDPTDYHTRRVALAETVVDGKELAVASVHLSWWDKGFQEEWARFEAVLKKLNKPLLLAGD 180

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
                 +          +G  DA     +    Y+            + +RID++  + E
Sbjct: 181 FNNPAGQEGYQAILASPLGLQDAFEVAQEKSGSYTVPPEIDGWKGNTEPLRIDYVFTTKE 240

Query: 232 ATSLLHSARIDTKPRGWTKPSDHT 255
               + +  +        + SDH 
Sbjct: 241 LA--VENLHVVFDGNKSPQVSDHY 262


>gi|71989663|ref|NP_504373.2| hypothetical protein F14F9.5 [Caenorhabditis elegans]
 gi|75022238|sp|Q9GUC9|YFEF9_CAEEL RecName: Full=Uncharacterized protein F14F9.5; Flags: Precursor
 gi|33620952|gb|AAF98622.2| Hypothetical protein F14F9.5 [Caenorhabditis elegans]
          Length = 314

 Score = 42.1 bits (97), Expect = 0.10,   Method: Composition-based stats.
 Identities = 36/295 (12%), Positives = 74/295 (25%), Gaps = 47/295 (15%)

Query: 4   VTVATWNV-NSIRARIHNLAAWIKEN----NPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           + + T+N+ NS  A + N    I ++    NPD++ LQE      N        L +   
Sbjct: 27  IRLMTFNIWNSG-ANVENGQQKIAKHILMVNPDVVALQEVYA---NVTRNLTLMLGHPWV 82

Query: 59  ----------------TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN 102
                                + N     +    I + T        +   +        
Sbjct: 83  AVERNHEYPDTAILTRHVLIPNTNLSTSGAVGVKIMLRTGFMIHFWSLHLDYTSYGPYAA 142

Query: 103 TQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD 162
              L      +  G  +       +I  +    ++  +  ++    I             
Sbjct: 143 NNKLVDKLDQIMAGENVGRGPQIYEILNLPMMKKWMEKVEDV-PIFIAGDFNGPSHLDWT 201

Query: 163 CYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF---------WDYYAD 213
                I  +        ++  ++  +  F +          + ++         W+Y   
Sbjct: 202 EQTKKIHGDWVIRWPATKELEEREFSDTFREIYPNVVSDPGI-TWSTVNKFNPEWNYTIP 260

Query: 214 SWSKNKGIRIDHIMLSPEATSL--LHSARIDTKPR-----GWTKPSDHTPVIVSL 261
                   RID +           L  +  +   R         PSDH  V    
Sbjct: 261 EPQD----RIDFLFYKGPVVPYQILTYSGCEKPQRIPFHSKNDYPSDHFAVFADY 311


>gi|297180781|gb|ADI16988.1| hypothetical protein [uncultured Sphingobacteriales bacterium
           HF0010_19H17]
          Length = 357

 Score = 42.1 bits (97), Expect = 0.10,   Method: Composition-based stats.
 Identities = 44/280 (15%), Positives = 89/280 (31%), Gaps = 42/280 (15%)

Query: 18  IHNLAAWIKENNP-DIICLQET-----KTEDKNFPFETLQSLNYHI-------------E 58
           +  +  +I++++  D   LQE      ++   NF      S  Y+               
Sbjct: 95  MDGVIDFIQKHSYVDFFLLQEVDSMSWRSNKLNFFQRIENSWQYNYTLNYASSFVPIPIF 154

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
                 Y G+  ++ +  I+   +    +     R         TQ + +    L   N 
Sbjct: 155 NPLGPVYGGLCSMTHFPVIDAYRYDLRTESAWPKRLFFLKRCFLTQRIPLLEKELIVINI 214

Query: 119 ITSTKYDDKISWIKRFLR---FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
             S      I   K       FA +       ++  GD+N  P  +          D+ F
Sbjct: 215 HNSAYDKSGIKKNKEMQHILNFAEREFYKGNYVVIGGDWNQSPPNYSNNTIPELYKDSSF 274

Query: 176 -TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA-T 233
              +V Q ++ + ++      +         S+               IDH ++SP    
Sbjct: 275 TNDDVPQDWKWVADVNTPTNRKLNMPYIKGLSYTSV------------IDHYLISPNVSV 322

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDS 273
             +  A +D +     K SDH PV + + + +   + + +
Sbjct: 323 DSI--AVVDMQ----FKYSDHQPVYLKVTLDKGSNQAKPA 356


>gi|294650031|ref|ZP_06727419.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
           19194]
 gi|292824124|gb|EFF82939.1| conserved hypothetical protein [Acinetobacter haemolyticus ATCC
           19194]
          Length = 822

 Score = 42.1 bits (97), Expect = 0.10,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 24/78 (30%), Gaps = 24/78 (30%)

Query: 223 IDHIMLSPEATSLLHSARI------------DTKPRGWT------------KPSDHTPVI 258
           +DH +      S +  A +              +                 + SDH PVI
Sbjct: 718 LDHAIADSNLYSKVKKAFVWHINADEPTVLDYNEEYKTDEQKALFFAEDPYRSSDHDPVI 777

Query: 259 VSLDIPEPRKKQQDSTSQ 276
           V +D+ +P  K     S 
Sbjct: 778 VDIDLQDPENKPSTQKSS 795


>gi|116748060|ref|YP_844747.1| endonuclease/exonuclease/phosphatase [Syntrophobacter fumaroxidans
           MPOB]
 gi|116697124|gb|ABK16312.1| Endonuclease/exonuclease/phosphatase [Syntrophobacter fumaroxidans
           MPOB]
          Length = 291

 Score = 42.1 bits (97), Expect = 0.10,   Method: Composition-based stats.
 Identities = 29/274 (10%), Positives = 65/274 (23%), Gaps = 33/274 (12%)

Query: 2   SVVTVATWNVNSIRA------------RIHNLAAWIKENNPDIICLQETKTEDKNFPFET 49
            ++ V T+N   +R             R   +A  +    P ++  QE       F  E 
Sbjct: 38  RLMRVMTFN---LRFENDSDGENRWGCRRDMVARIVARYGPSVLGTQEGMVSQLRFLEEH 94

Query: 50  LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
           LQ   Y +    +         + +   +++  L GD+  +                   
Sbjct: 95  LQ--GYELYAPRRFWDESCQYPTLFYRRDVMRPLEGDEFWLSLTPRVHRSKSWDSAF--- 149

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
              +  G           +   +      +    + +    A    +           I 
Sbjct: 150 PRMISFGRFE-------SLEDGRAVWVGVTHLDHIGDAARAAQAERVAEWACGRDGSCIL 202

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
             D                +          +     ++  +           R+D ++ S
Sbjct: 203 MGDFNDVPGSPAHRLLTDVLQDCWEALGRSEDESGMTYHKFTGIPQIA----RMDWVLAS 258

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            +    +    +         PSDH P    +  
Sbjct: 259 RDM--RVLDQVVVRDQESGRYPSDHFPCFADVKW 290


>gi|327277808|ref|XP_003223655.1| PREDICTED: nuclear receptor subfamily 5 group A member 2-like
           [Anolis carolinensis]
          Length = 855

 Score = 41.7 bits (96), Expect = 0.10,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 10/75 (13%)

Query: 188 NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRG 247
           ++G  D  R  +     Y+F  +   +WS     RID I  +   TS     +I  +   
Sbjct: 94  DLGLLDIWRHRNGRERDYTFLSHRHSTWS-----RIDMIWGTKLITSQATVIKILPRLY- 147

Query: 248 WTKPSDHTPVIVSLD 262
               SDH P+ + ++
Sbjct: 148 ----SDHAPMEILIE 158


>gi|322373807|ref|ZP_08048342.1| RgfB protein [Streptococcus sp. C150]
 gi|321277179|gb|EFX54249.1| RgfB protein [Streptococcus sp. C150]
          Length = 270

 Score = 41.7 bits (96), Expect = 0.10,   Method: Composition-based stats.
 Identities = 27/277 (9%), Positives = 69/277 (24%), Gaps = 26/277 (9%)

Query: 4   VTVATWNVNSIRARIH----NLAAWIKEN----NPDIICLQETKTEDKNFPFETLQ-SLN 54
           +   T N +S    +          +K+       D+IC QE    ++      +     
Sbjct: 1   MKFLTLNTHS---WMEEDAEGKFQTLKKQILKAQYDLICFQEV---NQEIETSVVATDAY 54

Query: 55  YHIETCGQKSYNGVAIL---------SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT 105
           YH        +    +                    +  G D   +   + +   +    
Sbjct: 55  YHALPSATPIHQDHFVRLLVEKLAEEGLQYHWTWAYNHIGYDHLNEGVAVLSRQPLTASE 114

Query: 106 LRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165
           + + ++  P           +     +     +      ++                   
Sbjct: 115 ILVSDVDDPTDYHTRRVAVAETTVDGREVAVASVHLSWWDKGFQEEWARIEERFKAIGKP 174

Query: 166 PIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225
            I+  +      +          +   D+     +T   Y+            + +RID+
Sbjct: 175 LILAGDFNNPAGQEGYQAILASPLHLQDSFEVAKETTGSYTVGPGIDGWKGNEEPLRIDY 234

Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
           +  S + T  ++   +          SDH  +   L+
Sbjct: 235 VFASQDWT--VNRLSVIFDGNNQPLVSDHYGLEAELE 269


>gi|212694729|ref|ZP_03302857.1| hypothetical protein BACDOR_04261 [Bacteroides dorei DSM 17855]
 gi|212662708|gb|EEB23282.1| hypothetical protein BACDOR_04261 [Bacteroides dorei DSM 17855]
          Length = 334

 Score = 41.7 bits (96), Expect = 0.10,   Method: Composition-based stats.
 Identities = 35/257 (13%), Positives = 67/257 (26%), Gaps = 37/257 (14%)

Query: 4   VTVATWNVNSIRARIHNLAAW---IKENNPDIICLQE---TKTEDKNFPFETLQSLNYHI 57
           + +  WN    R     LA     I+   P I+CLQE   T     +          Y I
Sbjct: 96  LKLVCWNAEGFRLNKDTLAKAAHSIRILQPGIVCLQERPHTNLLAWDTIQAAFPDYPYCI 155

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
               +     +A+ S++    +  +   D  +   +          +   +       G 
Sbjct: 156 INSREDEILNLAVFSRWPVGNVQEYYFPDSYNKMLQADIRMIGQTFRLFNVH--LQTTGM 213

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
             +S+  D   +     +R   Q   L   +  +    I+    +             +L
Sbjct: 214 NESSSMKDRLQTMRHHAIRRNRQADLLANAIAESPYPVIVCGDFNDIPASYVYRKISRSL 273

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
           +           G                              +RID+ + SP       
Sbjct: 274 QDCFLQAGRTWKGSYQRWGDF----------------------LRIDYTLCSPAF----- 306

Query: 238 SARIDTKPRGWTKPSDH 254
             +++         SDH
Sbjct: 307 --QVNCYQLVSNPWSDH 321


>gi|254476088|ref|ZP_05089474.1| endonuclease/exonuclease/phosphatase [Ruegeria sp. R11]
 gi|214030331|gb|EEB71166.1| endonuclease/exonuclease/phosphatase [Ruegeria sp. R11]
          Length = 331

 Score = 41.7 bits (96), Expect = 0.10,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 20/54 (37%), Gaps = 12/54 (22%)

Query: 223 IDHIMLSPEATSL---------LHSARIDTKPRGWT---KPSDHTPVIVSLDIP 264
           +D+IMLSP                 A             + SDH PV + +D+P
Sbjct: 278 LDYIMLSPGLMRHQPRWRIWHPFEDAACYEDAPLREALLQASDHFPVSLDIDLP 331


>gi|255014286|ref|ZP_05286412.1| hypothetical protein B2_10271 [Bacteroides sp. 2_1_7]
          Length = 268

 Score = 41.7 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 35/259 (13%), Positives = 78/259 (30%), Gaps = 31/259 (11%)

Query: 22  AAWIKENNPDIICLQETKTEDKN------FPFETLQSLNYHIETCGQKSYN-------GV 68
           A  I+ +  DI+ +QE    +++       P E  +SL +H+   G+  Y          
Sbjct: 14  AKVIEASQTDIVGIQEGHIYEEDGIKHDHVP-EIAESLGFHLFNQGEGHYILSRYPVVDS 72

Query: 69  AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKI 128
                   I++         +    +I                ++           + + 
Sbjct: 73  TASRYGVKIQVGKDKFCWMFNCHLYYIPYQPYQLNGIPYGDYPFIDTEEEAVWFANEARR 132

Query: 129 SWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN 188
             + R+ +   Q ++   P+   GD+N        +     +           + +    
Sbjct: 133 EEVTRYQKDIQQVMKEGYPVFLTGDFNEP--SFLDWTQRAADAGIHKIKVEWPATKAFSE 190

Query: 189 MGFTDAIRATHDTH---HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI---- 241
           +G  D+ R  H        Y++    ++    +   R+D ++ S      +  + I    
Sbjct: 191 IGMNDSYRTIHPDEVSTPGYTWTPVPSEQEILD---RLDFVLYSG---CKVTDSFITGES 244

Query: 242 --DTKPRGWTKPSDHTPVI 258
              +       PSDH  V 
Sbjct: 245 EATSDVVVSPYPSDHRMVT 263


>gi|257068283|ref|YP_003154538.1| metal-dependent hydrolase [Brachybacterium faecium DSM 4810]
 gi|256559101|gb|ACU84948.1| metal-dependent hydrolase [Brachybacterium faecium DSM 4810]
          Length = 316

 Score = 41.7 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 5/43 (11%)

Query: 1  MSVVTVATWNV-NSI----RARIHNLAAWIKENNPDIICLQET 38
          M+   VAT+N+ + +    R  +  LA  I   + D+I LQE 
Sbjct: 1  MTSWRVATFNIRHGLGPDERVDLPRLAGQIAALDADVIGLQEV 43


>gi|254509674|ref|ZP_05121741.1| endonuclease/exonuclease/phosphatase family protein
           [Rhodobacteraceae bacterium KLH11]
 gi|221533385|gb|EEE36373.1| endonuclease/exonuclease/phosphatase family protein
           [Rhodobacteraceae bacterium KLH11]
          Length = 333

 Score = 41.7 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 21/53 (39%), Gaps = 12/53 (22%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKP------------SDHTPVIVSLDI 263
           +D+IM+S +      + RI    R                 SDH PV + +D+
Sbjct: 281 LDYIMISTDLRDRHPNWRIWHPFRDTDCWGNPELREALLTASDHFPVTLDIDL 333


>gi|116182486|ref|XP_001221092.1| hypothetical protein CHGG_01871 [Chaetomium globosum CBS 148.51]
 gi|88186168|gb|EAQ93636.1| hypothetical protein CHGG_01871 [Chaetomium globosum CBS 148.51]
          Length = 574

 Score = 41.7 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 40/321 (12%), Positives = 79/321 (24%), Gaps = 65/321 (20%)

Query: 6   VATWNVNSI-------RARIHNLAAWIKEN--NPDIICLQETKTEDK--NFPFETLQSLN 54
           + T N   +       R R+  +   +      P I+ LQE  T++   +   E    L 
Sbjct: 10  LVTLNCWGLKYISKLRRERLTEIGRQLATASPQPHIVALQECFTQEDYQSIRHEVRFILP 69

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ---------- 104
           Y           G+AILS++   E   +    +    A +    +               
Sbjct: 70  YGKFYHSAAFGGGLAILSRWPIEESTMYRYPLNGRPTAFWRGDWYVGKGIACAKIRYGPA 129

Query: 105 ------TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP 158
                            G     +    + +      +      E    ++  GD+N+IP
Sbjct: 130 AKQVVEVFNTHTHAPYEGGKPNDSYLCHRTAQSWEMAKLLRGAAERGHLVLAMGDFNMIP 189

Query: 159 QPHD-------------CYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY 205
              +                     +         ++  +       +       +   Y
Sbjct: 190 MSREYQLITGLAPVSDVWRTLHPDSSLGPSHHPAEEARHRPVPTAEFNIQENGAASDGPY 249

Query: 206 SFWDYY----------------ADSWSKNKGIRIDHIMLSPEATSLLHSAR--------- 240
           + W +                 +       G R+D+I  S      L             
Sbjct: 250 NTWRWTKAQQKLLGPGKPPVTVSPDTPDPLGKRLDYIFASSGDAMALGGTWEVEQANVGM 309

Query: 241 IDTKPRGWTKPSDHTPVIVSL 261
           +   P      SDH  +  +L
Sbjct: 310 MMRHPELGCSLSDHFSIEATL 330


>gi|254522846|ref|ZP_05134901.1| endonuclease/exonuclease/phosphatase family protein
           [Stenotrophomonas sp. SKA14]
 gi|219720437|gb|EED38962.1| endonuclease/exonuclease/phosphatase family protein
           [Stenotrophomonas sp. SKA14]
          Length = 291

 Score = 41.7 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 37/274 (13%), Positives = 77/274 (28%), Gaps = 34/274 (12%)

Query: 4   VTVATWNVNSIRA------------RIHNLAAWIKENNPDIICLQE-TKTEDKNFPFETL 50
           + V ++NV   R             R   +   I + +P +I  QE  K +      E L
Sbjct: 37  LKVMSFNV---RTPADTEPGKRWPDRRDAMVKVILDAHPAVIGTQELVKEQADYL-SEHL 92

Query: 51  QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
               +  E     S +    +     +  +       L        +    N     +  
Sbjct: 93  PGYRWFGEGRRGGSGDEHMGVFYDSKVLAIEASGNFWLSDTPDVPGSITWGNLYPRMVTW 152

Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170
                        +           R   +   ++   +       +P          + 
Sbjct: 153 ALFRRLEDGRRFYF----MDTHLPYRDEDEPRRVKGAELIGKRLATLPADLPVVLTGDF- 207

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230
            ++    E  ++F ++     T             +F D+   +  +     +D +++  
Sbjct: 208 -NSEPGGETYKAFTRVLQDTRTQVKAPQGPRL---TFHDFTGKATVQ-----LDWVLV-R 257

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
             T+   S   D +      PSDH P++V LD P
Sbjct: 258 GFTAR--SFLTDDRRIDGVLPSDHFPLVVELDWP 289


>gi|147859354|emb|CAN83946.1| hypothetical protein VITISV_043666 [Vitis vinifera]
          Length = 1352

 Score = 41.7 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 23/236 (9%), Positives = 67/236 (28%), Gaps = 28/236 (11%)

Query: 25  IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLP 84
           ++    D++C  ETK ++                +            + +  ++      
Sbjct: 492 VRAQKADLVCFLETKVQE---------------MSLKMVKSLXTGRFTDWGXVDAGGASX 536

Query: 85  GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL 144
           G  +      +E           I   +    +      +    + +   +    +    
Sbjct: 537 GILIFWDNXVLELLELERGV-FTISGXFRNVEDG-----FVWVFTGVXGPVLLREKEEFW 590

Query: 145 EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL 204
           E+     G ++        +N I +  +    L +    ++   +    +++    +   
Sbjct: 591 EKLDAIKGLWDDPWCXGGDFNSIRFLGERRNGLNLTXEMRRFSEVIEEFSLKDLPSSXGX 650

Query: 205 YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
           ++++       +     R+D  ++S E             PR     SDH P+ + 
Sbjct: 651 FTWY----GGLNSQAASRLDRFLISNEWEDHFSGVFQSALPR---IVSDHCPISLE 699


>gi|110835509|ref|YP_694368.1| hypothetical protein ABO_2648 [Alcanivorax borkumensis SK2]
 gi|110648620|emb|CAL18096.1| conserved hypothetical protein [Alcanivorax borkumensis SK2]
          Length = 300

 Score = 41.7 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 42/286 (14%), Positives = 76/286 (26%), Gaps = 65/286 (22%)

Query: 3   VVTVATWNV-NSI--------------------RAR--IHNLAAWIKENNPDIICLQETK 39
            V + ++N+   I                    R+   I  +A  +  ++ D++ LQE  
Sbjct: 42  TVKLMSFNIQAGIGSQKFGDYITGSWKHLVAHPRSVETIEQIAQVL--SHFDVVGLQEV- 98

Query: 40  TEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF 99
             D                +   ++ N +  L+      +       +L    +F    F
Sbjct: 99  --DGG--------------SLRSRNMNQLVHLASMAGFPVWHQQLNRNLGRFGQFSNG-F 141

Query: 100 TINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159
               Q   I +  LP      +             +  A   L  +           +  
Sbjct: 142 LSRHQPFEITDHRLPGLPGRGAIVIKYGHPIQPLVVVVAHLALGEKVRNTQLSYLARLLA 201

Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK 219
            +     +   N     L+              D +          S+            
Sbjct: 202 DYKYVVVMGDFNCRLNHLDHSPLAALGLQTVRADNLNTYP------SWAPDRH------- 248

Query: 220 GIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
              IDHI+LSPE  S        T+       SDH P+   + IP+
Sbjct: 249 ---IDHILLSPELESR------HTRVLSDCLLSDHLPLATEIIIPD 285


>gi|326427499|gb|EGD73069.1| hypothetical protein PTSG_04783 [Salpingoeca sp. ATCC 50818]
          Length = 390

 Score = 41.7 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 41/273 (15%), Positives = 62/273 (22%), Gaps = 38/273 (13%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTED-KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75
           R   L   I     DI  L E    +   F         Y +  C +             
Sbjct: 72  RSPLLRDEIARIRADIFGLAE--CNEFDTFWEPMFAEEGYDVVYCAKSKSPAQRFGGTAD 129

Query: 76  PIEIVTHLP--------GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDK 127
              I               D    A   +       Q L +   +L  G      +    
Sbjct: 130 GCCIAVRRDRFRVVSKLQRDDAPVAVAAQLLDITTQQHLLVCMCHLKSGRTFGDMRSAQM 189

Query: 128 ISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQ 187
              +     F           I  GD+N       C              +V+       
Sbjct: 190 EMLLASISEFEEGLSRPCPTAIMLGDFNA-HSDEMCVTMCEEAGFTKVFSDVKHYPWTTW 248

Query: 188 NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI---DTK 244
                 +     +    ++                IDHI+  P   + L S      D +
Sbjct: 249 KYRHGPSADPKDEVEQKHT----------------IDHILARP--ATRLVSYLALPSDDE 290

Query: 245 PR-----GWTKPSDHTPVIVSLDIPEPRKKQQD 272
                    T PSDH  V V +     R+  +D
Sbjct: 291 VTQGCFPSATFPSDHVSVAVRIAWGPNREGSED 323


>gi|124360676|gb|ABN08665.1| reverse transcriptase - beet retrotransposon, putative [Medicago
          truncatula]
          Length = 152

 Score = 41.7 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 19/40 (47%), Gaps = 2/40 (5%)

Query: 4  VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTE 41
          + + + N+  + A      +   + E    ++CLQETK E
Sbjct: 1  MKILSVNIRGLGAPEKRREIHRLVAERKLTVLCLQETKLE 40


>gi|325474697|gb|EGC77883.1| endonuclease/exonuclease/phosphatase [Treponema denticola F0402]
          Length = 342

 Score = 41.7 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 33/262 (12%), Positives = 68/262 (25%), Gaps = 54/262 (20%)

Query: 30  PDIICLQET--KTEDKNFPFETLQSLNYHIETCGQKSYNGVAI--------LSKYQPIEI 79
           PDI+ LQE   +    +F      + +Y           G           +++ +   I
Sbjct: 104 PDILVLQEIESRAVIDDFCKILPMNNSYKYAVFIPPQNGGAFSTALLSKFPITETKVFNI 163

Query: 80  VTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFAS 139
            +        ++ R      T + + + +   +        +     +            
Sbjct: 164 YSGKRSLRPLIETRIRIGNSTGDNELVLLNVHWKSKVGDSDTDSIRRQQEEQAYKRLKEL 223

Query: 140 QRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH 199
           +  E + P I  GD+N   +     +      +                  +  A +  +
Sbjct: 224 KASEPQTPFIICGDFNQTLEEFSLLSEFDNCWNI---------------EAYRAAAQEGN 268

Query: 200 DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS------ARID----------- 242
                Y    +Y +SW       IDH   S   +    +        I+           
Sbjct: 269 QPEGSY----FYKESWEG-----IDHFFYSDNLSDG-KNFDLSFFCVINLKPLTDTSGKP 318

Query: 243 --TKPRGWTKPSDHTPVIVSLD 262
                      SDH P+ + L 
Sbjct: 319 DKYSVYSGKGYSDHLPIGIILK 340


>gi|224498832|ref|ZP_03667181.1| hypothetical protein LmonF1_03653 [Listeria monocytogenes Finland
           1988]
          Length = 256

 Score = 41.7 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 3/58 (5%)

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           SF D+       N+  +ID+I +S E    + +             SDH PV  +LD 
Sbjct: 201 SFHDFRPL-RPINELEKIDYIFVSEEF--QVCTYETIVDEVDGFSASDHFPVTANLDW 255


>gi|163801984|ref|ZP_02195880.1| putative phospholipase C precursor [Vibrio sp. AND4]
 gi|159174125|gb|EDP58933.1| putative phospholipase C precursor [Vibrio sp. AND4]
          Length = 442

 Score = 41.7 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 37/284 (13%), Positives = 79/284 (27%), Gaps = 45/284 (15%)

Query: 4   VTVATWNVNSIRARIHNLAA-------WIKENNPDIICLQETKTE-DKNFPFETLQSLNY 55
           + + T+N+ ++ A   ++         ++K    D++ LQE   +  + F  E  +   Y
Sbjct: 178 LNLMTYNIWALPAVASHIDDRYELIPSYVK--GFDVVALQEVFADGREAFLRELAKEYPY 235

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
             +   +  +N             + +         +               I    +  
Sbjct: 236 QTKMLDKDGFNIHDGGVTIVSRYPIVNQAQYVFPDCSSADCLADKG------INYAEIIK 289

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
           G       ++   +     +    ++ + ++    A   NI       Y+     N   F
Sbjct: 290 GGQA-YHIFNTHAASSDTEIAREHRQRQFKQMRAMAQSLNIPSNETVVYSGDFNVNKLKF 348

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR----------IDH 225
             +                + A    +  Y+  +   D    N   R          +D+
Sbjct: 349 PDDY---------QQMIANLSAIEPEYSGYT--ESTFDPRINNFAGRTFSGDGSVEYLDY 397

Query: 226 IMLSPEATSLLHSARIDTKPRGWT-------KPSDHTPVIVSLD 262
           +M+S E      +      PR            SDH PV   L 
Sbjct: 398 VMVSNEYGIKSQNDNYVDVPRSTAASIWQHYNLSDHFPVSTVLK 441


>gi|110346936|ref|YP_665754.1| endonuclease/exonuclease/phosphatase [Mesorhizobium sp. BNC1]
 gi|110283047|gb|ABG61107.1| Endonuclease/exonuclease/phosphatase [Chelativorans sp. BNC1]
          Length = 326

 Score = 41.7 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 63/235 (26%), Gaps = 35/235 (14%)

Query: 30  PDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLD 89
            DI+ LQE               +    +     S       S+         L      
Sbjct: 127 ADILVLQE---------------MTPRWQDALAASGIWPFESSRDLHANTDMKLFSRFPI 171

Query: 90  VQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLI 149
           + AR +            +    L     +       +     R  R  S  L       
Sbjct: 172 LTARTVSPDSADTGGRFAVRYELLVGARTLIVYAVHPQTPRSPRMWRERSAYL-----RD 226

Query: 150 FAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWD 209
            A      P          W N A ++   +     L + G+              + + 
Sbjct: 227 LAQALRSEPHDTPVVVAGDW-NTASWSPFFKDL---LSSTGYRTTESRWWPLP---TRFS 279

Query: 210 YYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
               SW++  G  ID I+L+P          +D+   G    S+H PVI  L +P
Sbjct: 280 IRFGSWTQ-LGTPIDRIVLTPA-------VGLDSLAMGPKFGSNHLPVIARLTLP 326


>gi|149922986|ref|ZP_01911405.1| endonuclease/exonuclease/phosphatase family protein [Plesiocystis
           pacifica SIR-1]
 gi|149816172|gb|EDM75681.1| endonuclease/exonuclease/phosphatase family protein [Plesiocystis
           pacifica SIR-1]
          Length = 236

 Score = 41.7 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 64/246 (26%), Gaps = 29/246 (11%)

Query: 14  IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSK 73
           +RA +  +AAWI E N D+ C+QE                     +     ++ VA L++
Sbjct: 13  LRANLRGIAAWIAEANADLACVQE-----------------ADASSWWSGRFDHVAFLAQ 55

Query: 74  YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKR 133
           +  +  VT     D                +                             
Sbjct: 56  HSGLPYVTRACNVDGGGLRYGTALLSRWPLEQAWAHTFAPTPPTFRKGFVISSLRWPGAP 115

Query: 134 FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTD 193
            L F    +  +          +                A       +     + +    
Sbjct: 116 ELEFDVVSVHTDFARASQRRRQVRELAALIRQRGRPVIVAGDLNSDWREGGATRLLARDL 175

Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253
            + A   T  + +F        S ++  R+D +++S         A          + SD
Sbjct: 176 ELEAFEPTGPMVTF---PGPGPSPDR--RLDWVLISKAFEFSGVEAV-------DLRLSD 223

Query: 254 HTPVIV 259
           H P++ 
Sbjct: 224 HRPLLA 229


>gi|134093694|ref|YP_001098769.1| hypothetical protein HEAR0422 [Herminiimonas arsenicoxydans]
 gi|133737597|emb|CAL60640.1| putative DNase I-like [Herminiimonas arsenicoxydans]
          Length = 337

 Score = 41.7 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 47/335 (14%), Positives = 79/335 (23%), Gaps = 60/335 (17%)

Query: 4   VTVATWNVNSIRARIHNL-----------------AAWIKEN----NPDIICLQET---- 38
           +  A++NV      +  +                   WI +     + D+I LQE     
Sbjct: 5   LRFASFNVC--NLALPGMKYYDDQIPYSSEEYDVKINWIAQQLDRLDADVIGLQEIFSQD 62

Query: 39  -------KTE---DKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDL 88
                  KT+   D          L  H+                    E+  +L     
Sbjct: 63  ALKDVLAKTQNYRDAQLIGFDPDPLTDHLTPSVALISRLPVSPGAVIYTELPNNLSVTLP 122

Query: 89  DVQARFIEATFTINTQTLRI-GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEP 147
            V       T  I   T+ I  +L          +K  D  +         +    L   
Sbjct: 123 GVHHPVSRFTRPILHATIEIAPDLLTHVFVCHLKSKLPDYRNDNNDDHPDQAGIAMLRSL 182

Query: 148 LIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF 207
           +    D   +       N                +      M                 F
Sbjct: 183 IRRGTDALGLRTLLSNVNKKKRLPIIVMGDFNDVASAIPTQMVMGLGKYPLDGIDDRL-F 241

Query: 208 WDYYADSWS---KNKGI---------RIDHIMLSPEATSL-------LHSARIDTKPRGW 248
             Y   S     ++ G           IDHI++S E           +           +
Sbjct: 242 ESYRIQSRRDALRDVGYTHVHDGIYETIDHILVSEEFNPASRAAIGEVAEVMYLNDHMTF 301

Query: 249 TKP--SDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
            +P  SDH  V+V + +         S+     P+
Sbjct: 302 KQPQASDHGLVLVRILLHGKSLPDTTSSGMPDVPL 336


>gi|115908401|ref|XP_001201354.1| PREDICTED: similar to RP1-30M3.3 [Strongylocentrotus purpuratus]
 gi|115935692|ref|XP_001196610.1| PREDICTED: similar to RP1-30M3.3 [Strongylocentrotus purpuratus]
          Length = 242

 Score = 41.7 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 19/42 (45%), Gaps = 5/42 (11%)

Query: 2  SVVTVATWNVNSI--RARIHN---LAAWIKENNPDIICLQET 38
          ++  + +WN++ +  R            I +  PD++ LQE 
Sbjct: 25 NIFRLMSWNIDGLDERNAEERTGAACDTIMKLAPDVVFLQEV 66


>gi|109390630|emb|CAJ13343.1| pol protein [Drosophila sechellia]
          Length = 903

 Score = 41.7 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 21/167 (12%), Positives = 49/167 (29%), Gaps = 6/167 (3%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
            + + +  WN   I  + + L A+IK+    I+ + ET+ E        L    +H    
Sbjct: 11  FNTLKIGYWNACGITNKTNELGAYIKKEGIQIMLVTETRLERN---SNALNFKGFHTYLA 67

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
              + +     +      +          ++  F+++       + RI            
Sbjct: 68  QNPTSHRKGGTATIINQNV---RHTCLNPIETDFLQSAPIALIPSSRIRANMTIVAPIYC 124

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167
              +        +        L+ +   +  GD+N   +    Y   
Sbjct: 125 PPVFKWTTEQFSKLFNHFDMLLDGKTKFVLGGDWNCKHRLWGNYLSC 171


>gi|325983079|ref|YP_004295481.1| endonuclease/exonuclease/phosphatase [Nitrosomonas sp. AL212]
 gi|325532598|gb|ADZ27319.1| Endonuclease/exonuclease/phosphatase [Nitrosomonas sp. AL212]
          Length = 250

 Score = 41.7 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 30/271 (11%), Positives = 68/271 (25%), Gaps = 37/271 (13%)

Query: 4   VTVATWNV-------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56
           + V T+N+       N +R  +H +  +++  + DI+ LQE   E         +  N  
Sbjct: 6   LKVLTYNIHKGFSATN-LRFILHEIKNFLRHIDADIVFLQEVHGER--------RISNQR 56

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
            +               +       +   +        +     I    + +  L     
Sbjct: 57  FDNWPNTQQFEFLADQVWHHYAYGKNAIYNSGHHGNAILSKYPIIEWDNINVSMLRSASR 116

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
           + +       + +     +         E     +     I        P+I   D    
Sbjct: 117 SLLHGVISIPETNQKIHIICIHFGLFGHERKRQLSALVKRISTHVSASEPLIIAGDFNDW 176

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLY-SFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            E  + +                     + ++    +      +G+ I            
Sbjct: 177 REQAEHYLHRDLGVKEVFKITRGAYARTFPAWMPVLSMDRIYYRGLDI------------ 224

Query: 236 LHSARIDTKPRG---WTKPSDHTPVIVSLDI 263
                ID        W + SDH P++    +
Sbjct: 225 -----IDCNRLHGQPWHRLSDHIPLLAEFRL 250


>gi|85714027|ref|ZP_01045016.1| Endonuclease/exonuclease/phosphatase [Nitrobacter sp. Nb-311A]
 gi|85699153|gb|EAQ37021.1| Endonuclease/exonuclease/phosphatase [Nitrobacter sp. Nb-311A]
          Length = 226

 Score = 41.7 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 5/41 (12%)

Query: 3  VVTVATWNVNS---IRAR--IHNLAAWIKENNPDIICLQET 38
           + V TWNV+    +  R  I  +A+ I+  +PDI+ LQE 
Sbjct: 4  TIRVMTWNVHGTFNLNPRFDIEAVASIIRRWSPDIVGLQEI 44


>gi|325498038|gb|EGC95897.1| hypothetical protein ECD227_2135 [Escherichia fergusonii ECD227]
          Length = 242

 Score = 41.7 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 31/251 (12%), Positives = 59/251 (23%), Gaps = 26/251 (10%)

Query: 15  RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN--YHIETCGQKSYNGVAILS 72
           R  +  L   ++  + DI+CLQE            +++     H E      ++  A   
Sbjct: 16  RFILPELRDAVRTVSADIVCLQEV-MGAHEVHPLHVENWPDTSHYEFLADTMWSDFAYGR 74

Query: 73  KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIK 132
                E               +     +++    R                +   +    
Sbjct: 75  NAVYPEGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVPPMTGKAIHVMCVHLGL 134

Query: 133 RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192
           R     +Q   L E +    D   +    D  +     N                +    
Sbjct: 135 REAHRQAQLAMLAEWVNELPDGEPVLVAGDFNDWRQKANHPLKVQAGLDEIFTRAHGRPA 194

Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPS 252
                                       +R+D I +     +   SA      R W   S
Sbjct: 195 RTFPVQFPL-------------------LRLDRIYV----KNASASAPTALPLRTWRHLS 231

Query: 253 DHTPVIVSLDI 263
           DH P+   + +
Sbjct: 232 DHAPLSAEIHL 242


>gi|151945993|gb|EDN64225.1| RNase [Saccharomyces cerevisiae YJM789]
          Length = 515

 Score = 41.7 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 49/192 (25%), Gaps = 3/192 (1%)

Query: 17  RIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNY--HIETCGQKSYNGVAILSK 73
           R   L    K  N D+ICLQE    + ++F  +    L Y         K++    +  +
Sbjct: 142 RSKVLLNEFKYYNSDVICLQEIDHIQFQSFWKDEFSKLGYDGQYYRNATKNHGVAIMWRR 201

Query: 74  YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKR 133
               ++   L   D +        T T N   +          + +           I  
Sbjct: 202 ELFHQVDKMLIDYDKESSESISARTTTNNVGLVLALKFSEKVLSNLGKKSSKKCGILIGT 261

Query: 134 FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTD 193
              F       E           + +     N +  END   +           +  F  
Sbjct: 262 THLFWHPFGTYERTRQCYIVLKKMKEFMHRVNVLQNENDGDLSHWFPFFCGDFNSQPFDT 321

Query: 194 AIRATHDTHHLY 205
              +       Y
Sbjct: 322 PYLSMTSKPVHY 333


>gi|242057665|ref|XP_002457978.1| hypothetical protein SORBIDRAFT_03g024493 [Sorghum bicolor]
 gi|241929953|gb|EES03098.1| hypothetical protein SORBIDRAFT_03g024493 [Sorghum bicolor]
          Length = 390

 Score = 41.7 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 41/264 (15%), Positives = 78/264 (29%), Gaps = 42/264 (15%)

Query: 6   VATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +  WN+  +   A+   + + I E++  I+CLQETK        E+  +L          
Sbjct: 5   ILVWNIRGLNSQAKWDAIRSKIDESSCQILCLQETK-------RESFNNL---------- 47

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
                     Y       HL                TI    L  G++   +G  IT   
Sbjct: 48  ----------YLKKFCPRHLNRFAFSPSIGASGGIITIWNGKLFDGSVVHSNGYCITIKF 97

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
            +   +                +        N+  +  D +      N    T    +  
Sbjct: 98  LNKLDNSTFHLTNVYGPSQSDAKMAFITWLLNVDTEELDDWILAGDFNLYRSTENRNKPG 157

Query: 184 QKLQNMGFTDAIRATHD------THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
                M   + + +  D          +++    ++  +    I++D +  SP  +    
Sbjct: 158 GDAIEMQLFNDLISALDLLELPFNGRTFTW----SNMQADPLLIKLDWVFCSPSWSWTHP 213

Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261
           S  I    R     SDH P +++ 
Sbjct: 214 STEIQPLDR---PISDHIPFVITF 234


>gi|134101851|ref|YP_001107512.1| endonuclease/exonuclease/phosphatase family protein
           [Saccharopolyspora erythraea NRRL 2338]
 gi|133914474|emb|CAM04587.1| endonuclease/exonuclease/phosphatase family [Saccharopolyspora
           erythraea NRRL 2338]
          Length = 312

 Score = 41.7 bits (96), Expect = 0.11,   Method: Composition-based stats.
 Identities = 33/258 (12%), Positives = 70/258 (27%), Gaps = 29/258 (11%)

Query: 22  AAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81
            A+++ +  D+  +QET   +     E    L +H    G  +      + +     +  
Sbjct: 58  EAFVRSSGADVFGMQET---EGTLADELAGRLGWHSYQTGDVALLSRYPIVERFQSRVGV 114

Query: 82  HLPGDDLDVQARFIEATFTINTQ------TLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135
                  D +   +       T                      +S + D+    +++  
Sbjct: 115 GARLQLDDGRQAVVWTVHLNYTPYGPYDACFDHMTPQQILDREESSGRVDEIRETLEKMA 174

Query: 136 RFASQRLELEEPLIFAGDYN-IIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDA 194
               Q      P+   GD+N                             +      F +A
Sbjct: 175 PQIEQARAGGAPVFLTGDFNAPSHLDWTGAAQDSHCGYTVQWPTSVAVAEAGLADSFREA 234

Query: 195 IRATHDTHHLYSFWDYYADSWSKNKGI--------RIDHIMLSPEATSLLHSARID---- 242
                 T    ++    +  + K+ G         RID +  +  A ++  +A +     
Sbjct: 235 NADPVATPGN-TW----SPVYPKHDGSTGADEPQDRIDFVHHAGSARTVSSTAEVRGEPA 289

Query: 243 --TKPRGWTKPSDHTPVI 258
                 G   P+DH  V+
Sbjct: 290 PVPDHAGNEWPTDHAAVV 307


>gi|167562541|ref|ZP_02355457.1| endonuclease/exonuclease/phosphatase family superfamily protein
           [Burkholderia oklahomensis EO147]
          Length = 171

 Score = 41.7 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 15/38 (39%), Gaps = 4/38 (10%)

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           D   ++      L    ID    G  + SDH P+ + L
Sbjct: 135 DFAFVTDTLIGRLSRCEID----GAVRASDHQPIALEL 168


>gi|108757277|ref|YP_635313.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus
           xanthus DK 1622]
 gi|108461157|gb|ABF86342.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus
           xanthus DK 1622]
          Length = 996

 Score = 41.7 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 27/74 (36%), Gaps = 14/74 (18%)

Query: 219 KGIR--------IDHIMLSPEATSLLH--SARIDTK----PRGWTKPSDHTPVIVSLDIP 264
           +G+R        IDH ++S E  +     S  I       P      SDH PVI S D+ 
Sbjct: 767 RGLRTTVDYPDAIDHTLVSNELAANYLPGSVEILRPDAWIPNYGDIVSDHYPVISSYDLG 826

Query: 265 EPRKKQQDSTSQNM 278
           +           N+
Sbjct: 827 DSGGVTDPEPLSNL 840


>gi|158315736|ref|YP_001508244.1| endonuclease/exonuclease/phosphatase [Frankia sp. EAN1pec]
 gi|158111141|gb|ABW13338.1| Endonuclease/exonuclease/phosphatase [Frankia sp. EAN1pec]
          Length = 470

 Score = 41.7 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 42/282 (14%), Positives = 76/282 (26%), Gaps = 30/282 (10%)

Query: 16  ARIHNLAAWIKENNPDIICLQET------------KTEDKNFPF--ETLQS--LNYHIET 59
           AR   +A  +    PD++ LQE             +T     P   + L+   LNY +  
Sbjct: 160 ARAQAIAKLLARQRPDVLGLQEVALWQEGPIGGPLRTTVDYLPILQKALKERGLNYEVAA 219

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDD--LDVQARFIEATFTINTQTLRIGNLYLPHGN 117
                   + I +  Q              +  + +            L +     P   
Sbjct: 220 ENTNFSGQLPISATRQVRFTDHDAILVRTGIPGRWQVSHPESHEYVARLTLPTAAGPFTI 279

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
               +  D         +          +      +             I+  +      
Sbjct: 280 TRGWSAVDVTARGKTVRVANTHLEPVSPQVRNAQANELYSALVTATRPVILLGDLNSQPS 339

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP-----EA 232
           ++   +      G+TDA    H     ++      D        RID+++  P       
Sbjct: 340 DLTGPYGLFTQGGYTDAWATIHGPDGGFTATQIELDVMPSTLDRRIDYVLYQPTRPEHSD 399

Query: 233 TSLLHSAR---IDTKPR----GWTKPSDHTPVIVSLDIPEPR 267
              + +AR   I  K R        PSDH  V+ +L +   R
Sbjct: 400 LEQVRAARATVIGNKLRDRTPSGLWPSDHAGVVAALTVSHQR 441


>gi|325287411|ref|YP_004263201.1| Endonuclease/exonuclease/phosphatase [Cellulophaga lytica DSM 7489]
 gi|324322865|gb|ADY30330.1| Endonuclease/exonuclease/phosphatase [Cellulophaga lytica DSM 7489]
          Length = 279

 Score = 41.7 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 30/264 (11%), Positives = 73/264 (27%), Gaps = 26/264 (9%)

Query: 7   ATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57
            T+N+         N+   R   +AA I+  +P  + +QE         +      NY+ 
Sbjct: 28  MTYNIKYDNTSDTINNWNFRKAKMAALIQHYSPSFLGIQE--GLHNQVSYLDSNLPNYNY 85

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
              G+         S     +    +   +    +             +           
Sbjct: 86  IGVGRDDGKQKGEYSAIYYNKNNFKVIKSNTFWLSTTPNKISVGWDAAME-RICTYGLFQ 144

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
              + +Y    +     +   +++   +  +    + N    P           +   T 
Sbjct: 145 HKKTKQYYWVFNAHFDHIGVEARKNSAKLIVEKIKNLNTKNYPVILMGDF----NVTPTT 200

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
           E   +        +T+++   +     ++ +             RID++         + 
Sbjct: 201 EAITTITNYIPDSYTNSLTTPYGPKGTFNGFTNRILDH------RIDYVFA-KNL--NVL 251

Query: 238 SARIDTKPRGWTKP-SDHTPVIVS 260
           S ++        K  SDH PV+ +
Sbjct: 252 SVKVIDDRLDNNKHISDHLPVLAT 275


>gi|111222155|ref|YP_712949.1| hypothetical protein FRAAL2735 [Frankia alni ACN14a]
 gi|111149687|emb|CAJ61379.1| hypothetical protein; putative DNase I-like domain [Frankia alni
           ACN14a]
          Length = 281

 Score = 41.7 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 3/41 (7%)

Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
           RID I ++      +    +   P      SDH  V+V LD
Sbjct: 231 RIDQIWVTTPLAPAVIGYTVLDTP---EGASDHHGVMVELD 268


>gi|167521495|ref|XP_001745086.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163776700|gb|EDQ90319.1| predicted protein [Monosiga brevicollis MX1]
          Length = 586

 Score = 41.7 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 18/49 (36%), Gaps = 10/49 (20%)

Query: 223 IDHIMLSPEATSLLHSARI-------DTKPRGWTK---PSDHTPVIVSL 261
           IDHI +S         A +        +  R   +   PSDH P+   L
Sbjct: 537 IDHICVSRALFQTTRRAGVAHELFEQFSDARLEGRARHPSDHRPIWADL 585


>gi|322488807|emb|CBZ24054.1| conserved hypothetical protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 645

 Score = 41.7 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 34/113 (30%), Gaps = 18/113 (15%)

Query: 4   VTVATWNVNSI-----R-ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57
           + V ++N+  I     R AR+   A   K  + D+I LQE       F  E    +  H 
Sbjct: 14  IRVLSFNLWGIFNSKMREARMKAFAT--KIEHYDVILLQE------QFSAEDFDLIFQHA 65

Query: 58  ETCGQKSYNGVAILSKY----QPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
               Q++Y      S +      +     +                 ++    
Sbjct: 66  SPVVQRTYTFRRFCSSFYGSGCAVISRYPICQAFFHTFPLQGCPEMVLHGDFF 118


>gi|260800722|ref|XP_002595246.1| hypothetical protein BRAFLDRAFT_142827 [Branchiostoma floridae]
 gi|229280490|gb|EEN51258.1| hypothetical protein BRAFLDRAFT_142827 [Branchiostoma floridae]
          Length = 114

 Score = 41.7 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 23/40 (57%), Gaps = 2/40 (5%)

Query: 2  SVVTVATWNVNSI--RARIHNLAAWIKENNPDIICLQETK 39
          + +++ + NV  +  + +  +L +++K    DII LQET 
Sbjct: 1  NDISLLSLNVRGLLEKNKRRSLLSYVKNQKADIIFLQETH 40


>gi|238060298|ref|ZP_04605007.1| endonuclease/exonuclease/phosphatase [Micromonospora sp. ATCC
           39149]
 gi|237882109|gb|EEP70937.1| endonuclease/exonuclease/phosphatase [Micromonospora sp. ATCC
           39149]
          Length = 238

 Score = 41.7 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 3/45 (6%)

Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
            RID + + P  T  +    +   P+   + SDH P++V L +P 
Sbjct: 195 RRIDAVFVDPRIT--VVDYDVVDTPQAR-RASDHFPIVVDLLLPA 236


>gi|299752303|ref|XP_002911744.1| glucose-repressible alcohol dehydrogenase transcriptional effector
           [Coprinopsis cinerea okayama7#130]
 gi|298409772|gb|EFI28250.1| glucose-repressible alcohol dehydrogenase transcriptional effector
           [Coprinopsis cinerea okayama7#130]
          Length = 684

 Score = 41.7 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 22/53 (41%), Gaps = 1/53 (1%)

Query: 17  RIHNLAAWIKENNPDIICLQETK-TEDKNFPFETLQSLNYHIETCGQKSYNGV 68
           R H +   I E+  DIICLQE    + ++F    L+   Y      +     +
Sbjct: 342 RKHQIMKEITEHGTDIICLQEVDIAQYEDFFSRDLEEHGYAGAYHPKSRSRTI 394


>gi|58040215|ref|YP_192179.1| hypothetical protein GOX1784 [Gluconobacter oxydans 621H]
 gi|58002629|gb|AAW61523.1| Hypothetical protein GOX1784 [Gluconobacter oxydans 621H]
          Length = 280

 Score = 41.7 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 18/46 (39%), Gaps = 4/46 (8%)

Query: 223 IDHIMLSPEATSLLH----SARIDTKPRGWTKPSDHTPVIVSLDIP 264
           IDHI+L   A   L                   SDH PV V L++P
Sbjct: 235 IDHILLGNAARDWLVPDSLRVMTYKNDTVPAGLSDHCPVSVRLEMP 280


>gi|308454513|ref|XP_003089877.1| hypothetical protein CRE_23222 [Caenorhabditis remanei]
 gi|308267978|gb|EFP11931.1| hypothetical protein CRE_23222 [Caenorhabditis remanei]
          Length = 1147

 Score = 41.7 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 68/252 (26%), Gaps = 45/252 (17%)

Query: 10  NVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVA 69
           N NSI  ++  L    +  N D+ CL ETK  D +F    L   + +      ++ +G  
Sbjct: 242 NCNSISNKLSKLDLLCEYYNFDVFCLSETKL-DDSFTDSLLSINDNYSILRKDRNRHGGG 300

Query: 70  ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKIS 129
           +            +        A            T+RI   Y P+     ST +D    
Sbjct: 301 VGILIAKHIRFVPVDLPASSQSAEVCAIDIFAGGTTIRIITAYHPNHGHCKSTLFD---- 356

Query: 130 WIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNM 189
                       L   +  +  GD+N+     +       +      ++        Q++
Sbjct: 357 -------TLEYLLIPGKHTVLLGDFNMPCIDWN--LLSAPDKACSDFVDFVVKHGLTQSV 407

Query: 190 GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT 249
                    +                       +D  +          +  I +      
Sbjct: 408 KSPTRFNPENI----------------------LDLCL---------SNTGIISDVSVGD 436

Query: 250 KPSDHTPVIVSL 261
             SDH  + V L
Sbjct: 437 LFSDHCLIKVVL 448


>gi|188584137|ref|YP_001927582.1| endonuclease/exonuclease/phosphatase [Methylobacterium populi
          BJ001]
 gi|179347635|gb|ACB83047.1| Endonuclease/exonuclease/phosphatase [Methylobacterium populi
          BJ001]
          Length = 259

 Score = 41.7 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 31/78 (39%), Gaps = 14/78 (17%)

Query: 5  TVATWNVNSIR---ARIHNLAAWIKENNPDIICLQE-TKTEDKNFPFETLQSL--NYHIE 58
           + +WN+  +R   A +  L   I++  PD++ +QE TK          L+      +  
Sbjct: 19 KIVSWNL--LRRTGAAVDCLVTLIEQERPDLLLMQEATK------EIAALKDRVGGVYAW 70

Query: 59 TCGQKSYNGVAILSKYQP 76
                 +G+A+ S    
Sbjct: 71 AQLPGRIHGLAMWSPIPW 88


>gi|147827031|emb|CAN59992.1| hypothetical protein VITISV_009778 [Vitis vinifera]
          Length = 1670

 Score = 41.7 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 20/40 (50%), Gaps = 2/40 (5%)

Query: 4   VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTE 41
           + + +WNV      ++   + A I+    D+ C+QE K +
Sbjct: 587 LRLLSWNVRGANDSSKRKVIKAMIRSQRVDLFCIQEXKIQ 626


>gi|227877707|ref|ZP_03995743.1| endonuclease-exonuclease-phosphatase family protein [Lactobacillus
           crispatus JV-V01]
 gi|227862695|gb|EEJ70178.1| endonuclease-exonuclease-phosphatase family protein [Lactobacillus
           crispatus JV-V01]
          Length = 339

 Score = 41.7 bits (96), Expect = 0.12,   Method: Composition-based stats.
 Identities = 37/269 (13%), Positives = 80/269 (29%), Gaps = 33/269 (12%)

Query: 19  HNLAAWIKENNPDIICLQE-------------TKTEDKNFPF-ETLQSLNYHIET----- 59
           + +   +K+ NPD +  QE              K  + +FP  ++  + N+H        
Sbjct: 79  NGVIQTMKKQNPDFMFFQEIDTDSTRSFHVNQVKKVEDDFPKMDSTFASNFHSAFLAVPL 138

Query: 60  --CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
                   +GV  +SKY+    +            +F++           + N       
Sbjct: 139 NNPHGTVRSGVLSMSKYKMDSAIRRKYPVSSVPIEKFVDLDRCFVVMRFPVTNGKDLVMI 198

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
               + YD      K  ++  S  +E E      G+Y I+    +               
Sbjct: 199 NSHMSAYDKGGKMRKAQMKLISSVMEKEYRR---GNYVIVGGDFNHALGKDMMTHFEHQE 255

Query: 178 EVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSWSKNKGIRI-DHIMLSPEATS 234
           E+      L     +         +  ++ +          K   + I D  ++S    +
Sbjct: 256 EIPSWVSVLDQKMLSKDFTMIKAQNRENVATVRATDMKYDPKVNYMTICDGFIVSKNVQA 315

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            +++     +        DH PV +  ++
Sbjct: 316 KVYNINTHFEYA------DHNPVRLEFEL 338


>gi|67078126|ref|YP_245746.1| hypothetical protein pE33L466_0251 [Bacillus cereus E33L]
 gi|66970432|gb|AAY60408.1| conserved hypothetical protein [Bacillus cereus E33L]
          Length = 237

 Score = 41.7 bits (96), Expect = 0.13,   Method: Composition-based stats.
 Identities = 30/261 (11%), Positives = 59/261 (22%), Gaps = 27/261 (10%)

Query: 4   VTVATWNVNS--IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + +  WN      R +I  +         DI+ + E          E  +      +  G
Sbjct: 1   MKIVAWN-AGMAFRKKIDKILPL----KADILVISEC---------EKPEKWGQIDKEKG 46

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
              +             I                   + +  +       ++        
Sbjct: 47  INDFLWEGDNPNKGIGIITFDERYQIEIYPDYDRSFRYIVPIKISAGNQEFIMFAVWSQK 106

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            +        + +L        L+EP I  GD+N                   F      
Sbjct: 107 GEKRYSSYIGQIYLALEKYASLLKEPCIIVGDWNSCKLYDWIKRVKTHSEVVEFLEGFGI 166

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
                                   + +     +   +    ID +  S    + L S  I
Sbjct: 167 KNAYHHFSEEEQG------EESKTTHYLRKEKARPFH----IDCLFTSEIFLNELESIEI 216

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            +    W + SDH P+    +
Sbjct: 217 GSYE-EWIEFSDHMPISAEFN 236


>gi|323307597|gb|EGA60864.1| Ngl2p [Saccharomyces cerevisiae FostersO]
          Length = 488

 Score = 41.7 bits (96), Expect = 0.13,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 49/192 (25%), Gaps = 3/192 (1%)

Query: 17  RIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNY--HIETCGQKSYNGVAILSK 73
           R   L    K  N D+ICLQE    + ++F  +    L Y         K++    +  +
Sbjct: 115 RSKVLLNEFKYYNSDVICLQEIDHIQFQSFWKDEFSKLGYDGQYYRNATKNHGVAIMWRR 174

Query: 74  YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKR 133
               ++   L   D +        T T N   +          + +           I  
Sbjct: 175 ELFHQVDKMLIDYDKESSESISARTTTNNVGLVLALKFSEKVLSNLGKKSSKKCGILIGT 234

Query: 134 FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTD 193
              F       E           + +     N +  END   +           +  F  
Sbjct: 235 THLFWHPFGTYERTRQCYIVLKKMKEFMHRVNVLQNENDGDLSHWFPFFCGDFNSQPFDT 294

Query: 194 AIRATHDTHHLY 205
              +       Y
Sbjct: 295 PYLSMTSKPVHY 306


>gi|301307706|ref|ZP_07213663.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 20_3]
 gi|300834380|gb|EFK64993.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 20_3]
          Length = 305

 Score = 41.7 bits (96), Expect = 0.13,   Method: Composition-based stats.
 Identities = 37/299 (12%), Positives = 69/299 (23%), Gaps = 56/299 (18%)

Query: 4   VTVATWNV-----------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52
           + VAT+N+           N    R   +A  I+ +  DI   QE K +           
Sbjct: 23  MVVATYNLRNANAGDSTNGNGWGQRYPYIAQLIQFHGFDIFGTQEGKYQ--QLQDLKNAM 80

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL-RIGNL 111
             Y     G+         S     +    +        +   +         L RI   
Sbjct: 81  PGYDYIGVGRDDGKQAGEHSAIFYRKEKFEVLDHGDFWLSTITDRPNKGWDAVLPRICTW 140

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
                     T     +      +     +   E   +        P            N
Sbjct: 141 GKFRDKQTGFTFLFFNL-----HMDHIGVQARAESAKLILKKLKEFP-EKLPAILTGDFN 194

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK--GIRIDHIMLS 229
                                      +  +  +       +++  ++    RIDH+ L+
Sbjct: 195 VDQHNESYLLLDNSGIMRDSYQIADFRYVPNGTF-------NAFHADRKTDSRIDHLFLT 247

Query: 230 PEATSLLHSARIDTKPRGWT-------------------------KPSDHTPVIVSLDI 263
            E    +    + T                                PSDH PV+V +++
Sbjct: 248 KEFD--VKKYGVLTDTYRSEAKESAQKEQDANFPKEVSMQKYVARTPSDHFPVMVVVEV 304


>gi|290892528|ref|ZP_06555521.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes FSL
           J2-071]
 gi|290557837|gb|EFD91358.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes FSL
           J2-071]
          Length = 256

 Score = 41.7 bits (96), Expect = 0.13,   Method: Composition-based stats.
 Identities = 35/271 (12%), Positives = 72/271 (26%), Gaps = 26/271 (9%)

Query: 3   VVTVATWNVN---------SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           + +V T+N+          S   R     + + +   D + ++E     +    + +   
Sbjct: 1   MFSVTTFNIRFDDTSERKKSWELRKTLTKSLLDKYQWDFMGVEE-PLLPQMLDMKAMLDW 59

Query: 54  NYH-IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           +Y  +             +        +       L           T     + +   +
Sbjct: 60  DYFGVGRDDGLEKGEFTAVFYNSTRFTLLQEGHFWLSDTPDVPSIHSTAMFPRICVWGKF 119

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                              +    FASQ L  +  +I      I+    +        N 
Sbjct: 120 ADSDGKQFYLFNTHLDHISEEARLFASQLLLKKAAIIAENSPVIVLGDFNTQPNTPTYNY 179

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                +  Q   +    G T +    H                 +N+  +ID+I +S E 
Sbjct: 180 ITEKYQDAQLISQKPAKGPTGSFHDFHPL-------------RPENELEKIDYIFVSNEF 226

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              +++             SDH PV  +LD 
Sbjct: 227 --QVNTYETIVDEVDGFSASDHFPVTANLDW 255


>gi|148273865|ref|YP_001223426.1| putative hydrolase [Clavibacter michiganensis subsp. michiganensis
           NCPPB 382]
 gi|147831795|emb|CAN02765.1| conserved hypothetical protein, putative hydrolase [Clavibacter
           michiganensis subsp. michiganensis NCPPB 382]
          Length = 281

 Score = 41.7 bits (96), Expect = 0.13,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 5/49 (10%)

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDH 254
           ++ +Y A   +     RID ++++P+    +    I+T   G   PSDH
Sbjct: 229 TWSNYKAPKRTT---RRIDWMLVTPDIE--VERVGINTTRIGGRAPSDH 272


>gi|29293902|gb|AAO63565.1| RNA editing complex protein MP100 [Trypanosoma brucei]
          Length = 902

 Score = 41.7 bits (96), Expect = 0.13,   Method: Composition-based stats.
 Identities = 32/289 (11%), Positives = 75/289 (25%), Gaps = 32/289 (11%)

Query: 2   SVVTVATWNV-------------------NSIRARIHNLAAWIKENNPDIICLQETKTED 42
           + + + TWNV                    S + R   +A  I+E + D++ +QE   E 
Sbjct: 616 ASLKLLTWNVMFDRYSGKPTPLGMPGIDWCSPK-RYPVIAKIIEEEDADVVGMQEV--EP 672

Query: 43  KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN 102
             + F + ++L            +          +     LP   ++             
Sbjct: 673 VFWEFLSKRALIRQRYYFSCGHMSPAIAPWGVLMLIHRRRLPVQSINYLNVPAWTNHVSL 732

Query: 103 TQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD 162
              + +  ++                S         +         +  GD   +   +D
Sbjct: 733 MPVVGLKMVHGTVHIAAAHLLAPYTKSHENARTSQDTALRHHMTKTLGGGDVVTMGDFND 792

Query: 163 CYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR 222
                         ++              D             F+      + +++  R
Sbjct: 793 WPTNEFIMPHESQYVDCWPVLHPNNPGKTMDETNTFCKLKVEEMFFGRSDKVFLRSR--R 850

Query: 223 I----DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPR 267
           +     H++ +       ++A        +  PSDH  V ++  +  P 
Sbjct: 851 LVPVEAHLVGTRSVNDENNNA----DAPAYLFPSDHYGVSITFSLKVPE 895


>gi|322387486|ref|ZP_08061096.1| RgfB protein [Streptococcus infantis ATCC 700779]
 gi|321142015|gb|EFX37510.1| RgfB protein [Streptococcus infantis ATCC 700779]
          Length = 272

 Score = 41.7 bits (96), Expect = 0.13,   Method: Composition-based stats.
 Identities = 34/276 (12%), Positives = 84/276 (30%), Gaps = 22/276 (7%)

Query: 4   VTVATWNVNSIRARIHN--------LAAWIKENNPDIICLQE-----TKTEDKNFPF--E 48
           +   T N +S    +          L   I EN+ D+IC QE     T T+ ++ P    
Sbjct: 1   MKFLTLNTHS---WMEKNPEEKFQLLLQDILENSYDLICFQEINQEITSTQVESGPLYNP 57

Query: 49  TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108
              +   H +   +     ++            +  G D   +   I +   I  + + +
Sbjct: 58  LPSAEPIHQDHYVRLLVEKLSEKGLDYYWTWAYNHIGYDRYHEGVSILSKTPIKAREILV 117

Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG-DYNIIPQPHDCYNPI 167
            ++  P           + +   K     +      ++        +  + +  +    +
Sbjct: 118 SDVDDPTDYHTRRVALVETVVEGKELAVASVHLSWWDKGFQEEWARFEAVLKELNKPLLL 177

Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227
             + +     E  Q+      +   DA     +    Y+            + +RID++ 
Sbjct: 178 AGDFNNPAGQEGYQAILSSP-LDLQDAFEVAKERSGSYTVPPEIDGWKGNTEPLRIDYVF 236

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           ++ +    +   ++    +   + SDH  +   L  
Sbjct: 237 MTKDL--QVEKLQVVFDGQASPQVSDHFGLQAELSW 270


>gi|189520528|ref|XP_001338369.2| PREDICTED: sphingomyelin phosphodiesterase 2-like [Danio rerio]
          Length = 436

 Score = 41.7 bits (96), Expect = 0.13,   Method: Composition-based stats.
 Identities = 40/281 (14%), Positives = 66/281 (23%), Gaps = 35/281 (12%)

Query: 5   TVATWNVNSI----RARIHNLA---AWIKENNPDIICLQETKTEDKNFPFETLQSLNY-H 56
            V + N   I    + R          + +   D+  LQE   E      +   S  Y H
Sbjct: 10  RVLSLNCWGIQYLSKKRQERFVLIGELLNQEELDVALLQEVWCEKDFLYLKKKLSTVYPH 69

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATF-----------TINTQT 105
                   +     +     I                     +            I+   
Sbjct: 70  SHYFKSGFFGSGLAVFSRHQIHDAFLYRYSLNGYPYMAQHGDWFGGKAVGKVLLNISGLK 129

Query: 106 LRIGNLYLPHGNPITSTKY-DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
           + +   +L          Y   ++       +F        + +I  GD N+ P      
Sbjct: 130 VHVFVTHLHAEYCREKDSYLSHRVVQAWELQQFIRHTSAGADVVILGGDLNMHPDDLGTR 189

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRID 224
               +        E                   TH + + ++  D          GIRID
Sbjct: 190 LLRNYTGLQDSFTEAATFDGC--------EGGLTHISENPFTLAD---GLAPFGGGIRID 238

Query: 225 HIM--LSPEATSLLHSARIDTKPRGWTKP--SDHTPVIVSL 261
           +IM   S E      S      P        SDH  +    
Sbjct: 239 YIMFKGSGEVDVSCESLSTTKGPVPGQPFPYSDHEALTAQF 279


>gi|291009864|ref|ZP_06567837.1| endonuclease/exonuclease/phosphatase family protein
           [Saccharopolyspora erythraea NRRL 2338]
          Length = 305

 Score = 41.7 bits (96), Expect = 0.13,   Method: Composition-based stats.
 Identities = 33/258 (12%), Positives = 70/258 (27%), Gaps = 29/258 (11%)

Query: 22  AAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81
            A+++ +  D+  +QET   +     E    L +H    G  +      + +     +  
Sbjct: 51  EAFVRSSGADVFGMQET---EGTLADELAGRLGWHSYQTGDVALLSRYPIVERFQSRVGV 107

Query: 82  HLPGDDLDVQARFIEATFTINTQ------TLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135
                  D +   +       T                      +S + D+    +++  
Sbjct: 108 GARLQLDDGRQAVVWTVHLNYTPYGPYDACFDHMTPQQILDREESSGRVDEIRETLEKMA 167

Query: 136 RFASQRLELEEPLIFAGDYN-IIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDA 194
               Q      P+   GD+N                             +      F +A
Sbjct: 168 PQIEQARAGGAPVFLTGDFNAPSHLDWTGAAQDSHCGYTVQWPTSVAVAEAGLADSFREA 227

Query: 195 IRATHDTHHLYSFWDYYADSWSKNKGI--------RIDHIMLSPEATSLLHSARID---- 242
                 T    ++    +  + K+ G         RID +  +  A ++  +A +     
Sbjct: 228 NADPVATPGN-TW----SPVYPKHDGSTGADEPQDRIDFVHHAGSARTVSSTAEVRGEPA 282

Query: 243 --TKPRGWTKPSDHTPVI 258
                 G   P+DH  V+
Sbjct: 283 PVPDHAGNEWPTDHAAVV 300


>gi|188577518|ref|YP_001914447.1| exodeoxyribonuclease III [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188521970|gb|ACD59915.1| exodeoxyribonuclease III [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 52

 Score = 41.7 bits (96), Expect = 0.13,   Method: Composition-based stats.
 Identities = 10/26 (38%), Positives = 22/26 (84%)

Query: 205 YSFWDYYADSWSKNKGIRIDHIMLSP 230
           Y+FW+Y+   +++++G+RIDH++L+ 
Sbjct: 27  YTFWEYFRQHFARDRGLRIDHLLLNR 52


>gi|42528087|ref|NP_973185.1| endonuclease/exonuclease/phosphatase family protein [Treponema
           denticola ATCC 35405]
 gi|41819132|gb|AAS13104.1| endonuclease/exonuclease/phosphatase family protein [Treponema
           denticola ATCC 35405]
          Length = 339

 Score = 41.7 bits (96), Expect = 0.13,   Method: Composition-based stats.
 Identities = 31/262 (11%), Positives = 65/262 (24%), Gaps = 54/262 (20%)

Query: 30  PDIICLQET--KTEDKNFPFETLQSLNYHIETCGQKSYNGVAI--------LSKYQPIEI 79
           PDI+ LQE   +    +F      + +Y           G           +++ +   +
Sbjct: 101 PDILVLQEIESRAVIDDFCKILPMNNSYKYAVFIPPQNGGAFSTALLSKFPITETKVFNV 160

Query: 80  VTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFAS 139
            +        ++ R      T + + + +   +        +     +            
Sbjct: 161 YSGKRSLRPLIETRIRIGNSTGDNELVLLNVHWKSKVGNSDTDSIRRQQEEQAYKRLKEL 220

Query: 140 QRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH 199
           +  E + P I  GD+N   +     +      +        Q   +     F        
Sbjct: 221 KASEPQTPFIICGDFNQTLEEFSLLSEFDNCWNIEAYRAAAQEGSQPAGSYFYKE----- 275

Query: 200 DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS------ARID----------- 242
                 S+           +G  IDH   S   +    +        I+           
Sbjct: 276 ------SW-----------EG--IDHFFYSDNLSDG-KNFDLSFFCVINLKPLTDTSGKP 315

Query: 243 --TKPRGWTKPSDHTPVIVSLD 262
                      SDH P+ + L 
Sbjct: 316 DKYSVYSGKGYSDHLPIGIILK 337


>gi|291240061|ref|XP_002739940.1| PREDICTED: angel-like [Saccoglossus kowalevskii]
          Length = 378

 Score = 41.3 bits (95), Expect = 0.13,   Method: Composition-based stats.
 Identities = 23/164 (14%), Positives = 41/164 (25%), Gaps = 5/164 (3%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73
           R +NL   IKE   DI+CLQE   ++++F       L  L Y      +         + 
Sbjct: 31  RKNNLMKEIKELQADILCLQEV--QEEHFQTFYQPQLALLGYEGVFKRRTGDKHDGCATF 88

Query: 74  YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKR 133
           +   +            +              + +        +          +   KR
Sbjct: 89  FLTSQFELETYRLIQYYKPGVYLLNRDNVGVIVLLKPKVNTSSHQRICVANTHLLFNPKR 148

Query: 134 FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
                +Q   L   +               Y P +   D     
Sbjct: 149 GDVKLAQLAVLFAEIDKLALRRTTHNGRPVYCPTLLCGDMNSIP 192


>gi|186684269|ref|YP_001867465.1| endonuclease I [Nostoc punctiforme PCC 73102]
 gi|186466721|gb|ACC82522.1| Endonuclease I [Nostoc punctiforme PCC 73102]
          Length = 603

 Score = 41.3 bits (95), Expect = 0.14,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 2/52 (3%)

Query: 223 IDHIMLSPEATSLLH-SARIDTKPRGWTKP-SDHTPVIVSLDIPEPRKKQQD 272
           IDH+++S   + +      I     G+++P SDH PVI +  +P  +     
Sbjct: 304 IDHLLVSENLSRVAQPKIDIVHVNVGFSRPVSDHDPVIAAFTLPANQSTSDT 355


>gi|255514310|gb|EET90569.1| Endonuclease/exonuclease/phosphatase [Candidatus Micrarchaeum
           acidiphilum ARMAN-2]
          Length = 234

 Score = 41.3 bits (95), Expect = 0.14,   Method: Composition-based stats.
 Identities = 33/262 (12%), Positives = 65/262 (24%), Gaps = 33/262 (12%)

Query: 3   VVTVATWNV---NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           ++ +   N+   N   AR+  +  +IKE  PDI+ LQE                  +   
Sbjct: 1   MLKLLDLNIWLYNDWEARMPKIVNFIKEQKPDIVTLQEV------MDDAKYNKYGDNTA- 53

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
                  G+   + Y    +    P    D +AR  EA  +    T  +      H +  
Sbjct: 54  KQIARAAGMDNCAFYLSGNLQKESPQWIGDRRARAGEAILSKYPLTKIVKKKLKRHPDDR 113

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                       +  +          +         ++          +   D     + 
Sbjct: 114 HHRGIVKARVMSEPPIDIIVVHFSNNDLFSRLQMEEVLHYIRRARIRPVVVGDFNMYPKN 173

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
                    +      +         +F                D++M+           
Sbjct: 174 IMQMVPEDYILSYALKKYVSFPSEGNTF----------------DYMMIPRSMRFGSLEC 217

Query: 240 RIDTKPRGWTKPSDHTPVIVSL 261
            ID         SDH+ +I  +
Sbjct: 218 -IDR------GLSDHSALIAEI 232


>gi|6323941|ref|NP_014012.1| Ngl2p [Saccharomyces cerevisiae S288c]
 gi|2497217|sp|Q03264|NGL2_YEAST RecName: Full=RNA exonuclease NGL2; AltName: Full=Carbon catabolite
           repressor protein 4 homolog
 gi|825551|emb|CAA89783.1| unknown [Saccharomyces cerevisiae]
 gi|190408511|gb|EDV11776.1| RNase [Saccharomyces cerevisiae RM11-1a]
 gi|256270686|gb|EEU05849.1| Ngl2p [Saccharomyces cerevisiae JAY291]
 gi|259148873|emb|CAY82118.1| Ngl2p [Saccharomyces cerevisiae EC1118]
 gi|285814291|tpg|DAA10186.1| TPA: Ngl2p [Saccharomyces cerevisiae S288c]
 gi|323346978|gb|EGA81255.1| Ngl2p [Saccharomyces cerevisiae Lalvin QA23]
 gi|323353212|gb|EGA85512.1| Ngl2p [Saccharomyces cerevisiae VL3]
          Length = 515

 Score = 41.3 bits (95), Expect = 0.14,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 49/192 (25%), Gaps = 3/192 (1%)

Query: 17  RIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNY--HIETCGQKSYNGVAILSK 73
           R   L    K  N D+ICLQE    + ++F  +    L Y         K++    +  +
Sbjct: 142 RSKVLLNEFKYYNSDVICLQEIDHIQFQSFWKDEFSKLGYDGQYYRNATKNHGVAIMWRR 201

Query: 74  YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKR 133
               ++   L   D +        T T N   +          + +           I  
Sbjct: 202 ELFHQVDKMLIDYDKESSESISTRTTTNNVGLVLALKFSEKVLSNLGKKSSKKCGILIGT 261

Query: 134 FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTD 193
              F       E           + +     N +  END   +           +  F  
Sbjct: 262 THLFWHPFGTYERTRQCYIVLKKMKEFMHRVNVLQNENDGDLSHWFPFFCGDFNSQPFDT 321

Query: 194 AIRATHDTHHLY 205
              +       Y
Sbjct: 322 PYLSMTSKPVHY 333


>gi|89095707|ref|ZP_01168601.1| Endonuclease/Exonuclease/phosphatase family protein [Bacillus sp.
            NRRL B-14911]
 gi|89089453|gb|EAR68560.1| Endonuclease/Exonuclease/phosphatase family protein [Bacillus sp.
            NRRL B-14911]
          Length = 1532

 Score = 41.3 bits (95), Expect = 0.14,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 26/63 (41%), Gaps = 10/63 (15%)

Query: 200  DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS--LLHSARIDTKPRGWT-KPSDHTP 256
                 YS+  Y  ++        +DHI++S    +   +    I++       + SDH P
Sbjct: 1025 PAEERYSY-SYQGNAQV------LDHILVSNNLAAATAVDIVHINSGFMEEHGRASDHDP 1077

Query: 257  VIV 259
            V++
Sbjct: 1078 VLI 1080


>gi|328725105|ref|XP_003248346.1| PREDICTED: craniofacial development protein 2-like, partial
           [Acyrthosiphon pisum]
          Length = 280

 Score = 41.3 bits (95), Expect = 0.14,   Method: Composition-based stats.
 Identities = 35/259 (13%), Positives = 79/259 (30%), Gaps = 19/259 (7%)

Query: 3   VVTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTE-DKNFPFETLQSLNYHIET 59
           V    TWN+ S+     +  + + +K+   D++ LQE +     +   + +    ++  +
Sbjct: 25  VFRFGTWNIRSLYKPGALKCITSIVKKYYVDLVALQEVRWPGSGHLKSDNMTI--FYSGS 82

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
              +  +GV  + K   +++V      D  +    IE   +     +          N  
Sbjct: 83  GNGRHEHGVGFIVKEFLVKLVKKFEAVDDRLCYIIIEGKTSNIA-IINCYAPTETADNDY 141

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
             + YD          R   + L  ++      ++                N+    +  
Sbjct: 142 KDSFYDKLERVYDMIPRSYIRILVGDQNAQVGREHAFRHTIGKESMHSESNNNGLRLISF 201

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
             +   + +                 ++      + S+     IDHI++     S +   
Sbjct: 202 ASTKGLVISSTQFQRKEIYKQ-----TWVSPDGRTKSQ-----IDHILIDKRYRSSVRQV 251

Query: 240 RIDTKPRGWTKPSDHTPVI 258
                 RG    +DH  VI
Sbjct: 252 ---RSYRGADGDTDHYLVI 267


>gi|284033875|ref|YP_003383806.1| endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836]
 gi|283813168|gb|ADB35007.1| Endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836]
          Length = 320

 Score = 41.3 bits (95), Expect = 0.14,   Method: Composition-based stats.
 Identities = 16/41 (39%), Positives = 21/41 (51%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           ID I LSP     L +A I  + +     +DH P  +SLDI
Sbjct: 280 IDQIWLSPALAPKLTAAWIGRRRKLARDGTDHDPAWISLDI 320


>gi|91785939|ref|YP_546891.1| endonuclease/exonuclease/phosphatase [Polaromonas sp. JS666]
 gi|91695164|gb|ABE41993.1| Endonuclease/exonuclease/phosphatase [Polaromonas sp. JS666]
          Length = 267

 Score = 41.3 bits (95), Expect = 0.14,   Method: Composition-based stats.
 Identities = 31/270 (11%), Positives = 69/270 (25%), Gaps = 33/270 (12%)

Query: 3   VVTVATWNVN-SI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN-- 54
           +  V T N++        +  +  L   ++    D++ LQE  T +     +   +    
Sbjct: 22  LFKVLTVNIHKGFTFFNRKFILPELREAVRTVGADVVFLQEV-TGNHLKHADKFDNYPDT 80

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR-IGNLYL 113
            H E      +   A                       RF     +I+    R + +  L
Sbjct: 81  PHYEFLADTIWPQFAYGRNAVYTNGHHGNAVLSKFPIVRFENRDVSISGPERRGLLHCEL 140

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
                  +         +    R     +  +        +  +    D  +  +  +  
Sbjct: 141 KVPGRSVNVHAVCVHLGLMETHRVQQMEMLCDLVRKDIPPHAPVVVAGDFNDWRLRAHTL 200

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
             +           N        A                       +R+D I +     
Sbjct: 201 LESGADLHEVFVQANGQAARTFPARLPL-------------------LRLDRIYV----R 237

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           + +  A +    R W+  SDH P+   +++
Sbjct: 238 NAIGHAPVVLPSRPWSHLSDHAPLAAEIEL 267


>gi|270003873|gb|EFA00321.1| hypothetical protein TcasGA2_TC003159 [Tribolium castaneum]
          Length = 398

 Score = 41.3 bits (95), Expect = 0.14,   Method: Composition-based stats.
 Identities = 44/269 (16%), Positives = 71/269 (26%), Gaps = 27/269 (10%)

Query: 9   WNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGV 68
           WN     +R   +   I E  PDIICLQE   +  NF    L +  Y      +     V
Sbjct: 137 WN-----SRKFRIIEEIVEYCPDIICLQEV--DHFNFLKYILGTQGYTGVFYPKPDSPCV 189

Query: 69  AILSKYQPIEIVTHLPGDDL---DVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYD 125
            I     P         +     ++++R +E     + Q   + NL +            
Sbjct: 190 YISGNNGPDGCAIFYRTNKFDVINIESRILEIWRVQSNQVALLANLRIKETGQEVCVTTT 249

Query: 126 DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ-PHDCYNPIIWENDACFTLEVRQSFQ 184
              +    FL         +     +      P      +N    E      L       
Sbjct: 250 HLKARQGAFLSTLRNEQGKDLLQFVSQHCGPRPVVICGDFNAEPIEPIYSTILSDEYLNL 309

Query: 185 KLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK 244
                    +   +      Y+ W    +    +    ID+I            A +   
Sbjct: 310 GSAYADCDSSSANSAAREPPYTTWKIRDEGEVCHT---IDYIFYKKGCLE--VEA-VLEL 363

Query: 245 PRGWT----------KPSDHTPVIVSLDI 263
           P G             PSDH  ++    I
Sbjct: 364 PTGEEIGEDRVPSFSYPSDHFSLVCDFKI 392


>gi|50119211|ref|YP_048378.1| endonuclease/exonuclease/phosphatase family protein [Pectobacterium
           atrosepticum SCRI1043]
 gi|49609737|emb|CAG73171.1| endonuclease/Exonuclease/phosphatase family protein [Pectobacterium
           atrosepticum SCRI1043]
          Length = 392

 Score = 41.3 bits (95), Expect = 0.14,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 28/90 (31%), Gaps = 31/90 (34%)

Query: 200 DTHHLYSFWDYYADSWSKNKGIRI---DHIMLSPEATSLLHSARIDT------------- 243
                Y++  Y++      KG R+   D+I LS      +    ++              
Sbjct: 307 PEKERYTY--YFSGGK---KGARLNQLDYIFLSAPLHQAVVEWGVERRGIYNIDKIAAKE 361

Query: 244 ---------KPRGWTKP-SDHTPVIVSLDI 263
                    +   W    SDH  + V +DI
Sbjct: 362 GAEPVTPLPEVTSWDTAASDHAALWVEVDI 391


>gi|85712710|ref|ZP_01043755.1| Uncharacterized conserved secreted protein [Idiomarina baltica
           OS145]
 gi|85693442|gb|EAQ31395.1| Uncharacterized conserved secreted protein [Idiomarina baltica
           OS145]
          Length = 397

 Score = 41.3 bits (95), Expect = 0.14,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 27/65 (41%), Gaps = 15/65 (23%)

Query: 210 YYADSWSKNKGIRIDHIMLSPEATSLLHSARID--------TKPRGWTKPS-DHTPVIVS 260
           Y+  +W K    R+D+++ S +    +  A I          +       S DH  V + 
Sbjct: 339 YHTAAWRK----RVDYVLPSDDLI--VKDAGIFWPVQGEPGYELMKKRDASSDHRLVWLD 392

Query: 261 LDIPE 265
           +++PE
Sbjct: 393 IELPE 397


>gi|298204333|gb|ADI61815.1| endonuclease-reverse transcriptase [Bombyx mori]
          Length = 1010

 Score = 41.3 bits (95), Expect = 0.14,   Method: Composition-based stats.
 Identities = 34/255 (13%), Positives = 67/255 (26%), Gaps = 16/255 (6%)

Query: 2   SVVTVATWNVNSI--RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           + + + TWNV  +    ++H L   ++  N  I  L ET  ++        ++L  H   
Sbjct: 59  NDIRIGTWNVRGLIDEGKLHVLDHELERCNTVITGLSETHWKESG-----HRNLENHTIY 113

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
                 +  A +    P      + G +                    I           
Sbjct: 114 FSGNELSSFAGVGIAIPKLWTESVLGYNPVSDRIITMKLSASPCALNIIQVYAPTSAATE 173

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              +                + L +           ++                    E 
Sbjct: 174 EKIESFYNQLEACINNIPKREILMIIGDFNAKVGTTVLDVGLRNIVGHYGLGCRNSRGER 233

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
              F    N+   +     H    LY++     +   +N+   ID+I++     S + +A
Sbjct: 234 LIQFAADNNLTIMNTAFKHHPR-RLYTWTS--PNGEHRNQ---IDYILIKTRWRSSITNA 287

Query: 240 RIDTKPRGWTKPSDH 254
                  G    SDH
Sbjct: 288 HTLP---GADVTSDH 299


>gi|183599926|ref|ZP_02961419.1| hypothetical protein PROSTU_03446 [Providencia stuartii ATCC 25827]
 gi|188022200|gb|EDU60240.1| hypothetical protein PROSTU_03446 [Providencia stuartii ATCC 25827]
          Length = 301

 Score = 41.3 bits (95), Expect = 0.14,   Method: Composition-based stats.
 Identities = 31/265 (11%), Positives = 63/265 (23%), Gaps = 33/265 (12%)

Query: 28  NNPDIICLQET-KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGD 86
            + DI+ LQE   T      F  ++SL +   T     YN   +                
Sbjct: 41  YDVDIVILQEVFNTHSAQKLFSGMRSLGFFYHTPVAAQYNESVLSYCDSNHCWNAKKGEW 100

Query: 87  DLDVQARFIEATFTINTQTLRIGNLYLPHG----------------NPITSTKYDDKISW 130
           D+  Q     A  +      R   L+   G                              
Sbjct: 101 DMVQQVNSGIAIVSRYPIVYREYQLFDDAGCGADRFSAKGGVRAVIEIEGKMLQVIGTHL 160

Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG 190
                                   N           I             + +++  ++ 
Sbjct: 161 QSDDNFCLMTSPSSHRKAQLTQLINWAETSITEDRQITILGGDLNINYGSEEYEQALDII 220

Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKN------KGIRIDHIML----SPEATSLLHSAR 240
                   +        WD+  ++  +       +   +D+I      S +  + +  ++
Sbjct: 221 GWGEPHHFNPRPS----WDFSTNNVIREAYPDTRQSWHLDYIFAKNMRSIKQQTRVIKSK 276

Query: 241 IDTKPRGWTKP--SDHTPVIVSLDI 263
           I            SDH PV+  +++
Sbjct: 277 IGYNYNNKVFFDYSDHYPVVAEIEL 301


>gi|118588886|ref|ZP_01546293.1| Endonuclease/exonuclease/phosphatase [Stappia aggregata IAM
          12614]
 gi|118438215|gb|EAV44849.1| Endonuclease/exonuclease/phosphatase [Stappia aggregata IAM
          12614]
          Length = 238

 Score = 41.3 bits (95), Expect = 0.14,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 5/40 (12%)

Query: 3  VVTVATWNVN-SI----RARIHNLAAWIKENNPDIICLQE 37
          ++ + ++N+  SI    R R       I+E + DI+ LQE
Sbjct: 1  MLKIGSYNIQKSIGVDARRRPDRTLKVIQELDCDILALQE 40


>gi|329769127|ref|ZP_08260548.1| hypothetical protein HMPREF0433_00312 [Gemella sanguinis M325]
 gi|328839473|gb|EGF89050.1| hypothetical protein HMPREF0433_00312 [Gemella sanguinis M325]
          Length = 264

 Score = 41.3 bits (95), Expect = 0.14,   Method: Composition-based stats.
 Identities = 38/285 (13%), Positives = 70/285 (24%), Gaps = 51/285 (17%)

Query: 4   VTVATWNVNSIRARIHN--------LAAWIKENNPDIICLQET----------------- 38
           + + T NV+S    + N        LA  I E   D+I +QE                  
Sbjct: 1   MKLLTINVHS---WLENNQLEKLDILAKTIVEKKYDVIAMQEVNQLINSENVYSNIKKDN 57

Query: 39  --KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIE 96
             K              +Y+              L+     ++           Q     
Sbjct: 58  FGKMLLDKINSYGESDYSYYWTYSHIGFDKYEEGLAILAKGKVCDVEDFYCTSHQDIHSI 117

Query: 97  ATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI 156
           ++  I   TL I             T                + R  L   +    D N+
Sbjct: 118 SSRKILKVTLEIN----------NQTIEFYSCHMNLPTCEDENIRENLYNLVNHTDDSNL 167

Query: 157 IPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS 216
                D       +      +     F   +     D     +      S W+   +   
Sbjct: 168 KIFMGDFNTDYFNQKKDYNMIIEMGLFDTYEMAQKKDDGVTVYKNI---SGWEDSMNKKK 224

Query: 217 KNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
                 +D+I  + E    +  + +      +   SDH  + V++
Sbjct: 225 ------LDYIFSNREL--NVTESSVIFNNTNYPIISDHNGLEVTI 261


>gi|315499225|ref|YP_004088029.1| endonuclease/exonuclease/phosphatase [Asticcacaulis excentricus CB
           48]
 gi|315417237|gb|ADU13878.1| Endonuclease/exonuclease/phosphatase [Asticcacaulis excentricus CB
           48]
          Length = 303

 Score = 41.3 bits (95), Expect = 0.14,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 19/53 (35%), Gaps = 7/53 (13%)

Query: 211 YADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            A     + G  IDHIM S      L   R      G    SDH P+I    I
Sbjct: 258 MAVRRQLDVGSPIDHIMASHTV--HLRHCR-----TGPVMASDHRPLICEFSI 303


>gi|220912809|ref|YP_002488118.1| endonuclease/exonuclease/phosphatase [Arthrobacter
          chlorophenolicus A6]
 gi|219859687|gb|ACL40029.1| Endonuclease/exonuclease/phosphatase [Arthrobacter
          chlorophenolicus A6]
          Length = 225

 Score = 41.3 bits (95), Expect = 0.14,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 5/41 (12%)

Query: 4  VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTED 42
          + V ++N   +R  A    L A  + ++ D +CLQE    D
Sbjct: 1  MRVISYN---LRKHAASGELLALARNHDIDALCLQEVDAAD 38


>gi|190348984|gb|EDK41547.2| hypothetical protein PGUG_05645 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 308

 Score = 41.3 bits (95), Expect = 0.14,   Method: Composition-based stats.
 Identities = 40/261 (15%), Positives = 82/261 (31%), Gaps = 28/261 (10%)

Query: 14  IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVA---- 69
           + +RIH+         P ++ LQE K    N   + L  LN   +T    ++ GV     
Sbjct: 66  LNSRIHDF--------PTLVGLQELK---HNQLVDVLAGLNGQNQTEFPWAHYGVGRDDG 114

Query: 70  ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKIS 129
           +        +   L  D L+   +++  T  + +     G+  +       + +   K++
Sbjct: 115 VEKGEYSAILYNTLEWDLLNGTYKWLSPTPDVPSYGWDAGSRRIVTMTTFRNKQTGTKVN 174

Query: 130 WIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNM 189
           +    L   S++   E   +  G    IP  +  +    + + A        +       
Sbjct: 175 YFNTHLDNKSEQSRQESTKLIVGWLQSIPNDYPQFLSGDFNSIASDIAYETVADYMADTN 234

Query: 190 GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML-SPEATSL----LHSARIDTK 244
              +     +     Y+ ++Y       +    ID I   S          +    + + 
Sbjct: 235 VIANIHETGN--ETTYTGFEY------GDHQSVIDFIWAPSNSNKPKSGVEVVGYEVLSN 286

Query: 245 PRGWTKPSDHTPVIVSLDIPE 265
                + SDH PV     I  
Sbjct: 287 NYSDFRFSDHRPVTSHFRISS 307


>gi|328724970|ref|XP_003248303.1| PREDICTED: craniofacial development protein 2-like [Acyrthosiphon
           pisum]
          Length = 263

 Score = 41.3 bits (95), Expect = 0.14,   Method: Composition-based stats.
 Identities = 31/252 (12%), Positives = 65/252 (25%), Gaps = 25/252 (9%)

Query: 8   TWNVNSIRA-----RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           TWNV   R       +HN+   +++    +  LQE +  +      T+      I   G 
Sbjct: 32  TWNV---RTLYKSGAVHNIVNEVEKYKVKLTALQEIRWTNTG----TININETTIFYGGC 84

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
                +          +       D++ +   +          + +              
Sbjct: 85  TEQRQLGTGFAVHKDLVPVVKEFKDINSRMSVLTIEAQWFISFVNVHAPTEDKSQDEKEA 144

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
            Y+   S +        Q +  +       +                 ++    +     
Sbjct: 145 FYEQLESALNLIPSNRIQIVLGDLNAKVGKEEMFRQVTGGHSLHDETNDNGTKLINFAIW 204

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
                N     +    H   H  ++     D    N+   IDHI+++    + +      
Sbjct: 205 -----NGLVIRSTMFPHKNIHKGTWRS--PDGRYTNQ---IDHILVNSRFKNYIQDV--- 251

Query: 243 TKPRGWTKPSDH 254
              RG    SDH
Sbjct: 252 RSVRGADSDSDH 263


>gi|238883835|gb|EEQ47473.1| conserved hypothetical protein [Candida albicans WO-1]
          Length = 891

 Score = 41.3 bits (95), Expect = 0.14,   Method: Composition-based stats.
 Identities = 47/293 (16%), Positives = 84/293 (28%), Gaps = 46/293 (15%)

Query: 8   TWNVNSIRARIHN-LAAWI--KENNPD--IICLQET---------------KTEDKNFPF 47
           T+NVN   +     +  WI  +EN+ D   I LQE                KT+ +    
Sbjct: 594 TFNVNG--SVYEGDIDKWIYPEENDYDLIFIGLQEIVVLNAGQMVNTDFRNKTQWERKIL 651

Query: 48  ETLQSLNYHIETC----------GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA 97
             LQ  N ++                  + V  +S  +     T L G   +     +  
Sbjct: 652 SVLQKRNKYMVMWSGQLGGVALYFFVKESQVKYVSNVECSFKKTGLGGVSANKGGIAVSF 711

Query: 98  TFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII 157
            F+  T    +        + I     + K            +    +   I+ GD+N  
Sbjct: 712 KFSDTTICF-VSAHLAAGLSNIEERHQNYKALIKGIQFSKNRRIQNHDAV-IWLGDFNYR 769

Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF-WDYYADSWS 216
               +     +        +       K    G +    +  + +   ++ +D     + 
Sbjct: 770 IDMTNDQVKPMILQKLYAKIFECDQLNKQMANGESFPFFSEQEINFPPTYKFDKGTKVYD 829

Query: 217 KNKGIRI----DHIM-LS-PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            ++  RI    D I+ LS       L               SDH PV  +  I
Sbjct: 830 TSEKQRIPAWTDRILFLSRQNLIEPLS-----YNSCQNLTFSDHRPVYATFKI 877


>gi|254411438|ref|ZP_05025215.1| endonuclease/exonuclease/phosphatase family [Microcoleus
           chthonoplastes PCC 7420]
 gi|196181939|gb|EDX76926.1| endonuclease/exonuclease/phosphatase family [Microcoleus
           chthonoplastes PCC 7420]
          Length = 261

 Score = 41.3 bits (95), Expect = 0.15,   Method: Composition-based stats.
 Identities = 41/275 (14%), Positives = 79/275 (28%), Gaps = 31/275 (11%)

Query: 1   MSVVTVATWNV--------N-SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51
           M++  + T+N+        N   R R   +AA I+E +PDII  QE K           +
Sbjct: 1   MNI-RIITFNIRYDKPDPDNQDWRIRRDAIAALIQEYHPDIIGTQEGKAH--QLLDLHRR 57

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIE-----ATFTINTQTL 106
             NY      +         + +   + +  L   D  +             +      +
Sbjct: 58  LPNYQSIGGDRTGTGTGEHCAIFYNQDRLKCLDNGDFYLSDTPDIAGSISPEWGNPAPRM 117

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
               ++       T T ++  + +     R    RL  +  +            +     
Sbjct: 118 ATWAVFSVAQVSKTITCFNTHLDYTSAKARELGARLIRDRMIHC-------HPDNTYLFL 170

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226
               N    +L          N        A  +     S   +  ++++      +D I
Sbjct: 171 TGDFNAEPGSLPREILSDSSTNSMILHDALAGVELEKQQSIHGFTGEAFAA-----VDTI 225

Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
                      +  +D +      PSDH PVI + 
Sbjct: 226 YYDSRLRQ--ETVTVDNRKWQGIFPSDHFPVIANF 258


>gi|83643892|ref|YP_432327.1| metal-dependent hydrolase [Hahella chejuensis KCTC 2396]
 gi|83631935|gb|ABC27902.1| Metal-dependent hydrolase [Hahella chejuensis KCTC 2396]
          Length = 265

 Score = 41.3 bits (95), Expect = 0.15,   Method: Composition-based stats.
 Identities = 32/247 (12%), Positives = 63/247 (25%), Gaps = 42/247 (17%)

Query: 18  IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPI 77
           +  +AA +  +  D++ LQE                              +      Q  
Sbjct: 50  LDRIAALL--SQYDVVALQEC-------------------------DGGSIRSGFVNQVE 82

Query: 78  EIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF 137
            +           Q          ++  L                    + + I  +   
Sbjct: 83  YLAEKSGHPYWFQQLNRNLGRIAQHSNGLLSRYRPNSVTQHKLPGVIPGRGAIIATYGDP 142

Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA 197
            +  + +   L            H C     +E+          + Q L +         
Sbjct: 143 TNPLVVVMLHLSLGEKAQCQQLEHVCKLIEGYEHVVLMGDLNNHAEQLLSSTALGRTTLV 202

Query: 198 THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257
           +       +F  +  +         +DHIM+SP     + +A +   P      SDH PV
Sbjct: 203 SLPERVN-TFPSWRPERS-------LDHIMVSPGL--QIRNAGVVCFP-----VSDHLPV 247

Query: 258 IVSLDIP 264
            V + +P
Sbjct: 248 AVDVALP 254


>gi|89070957|ref|ZP_01158183.1| possible Endonuclease/Exonuclease/phosphatase fa [Oceanicola
           granulosus HTCC2516]
 gi|89043464|gb|EAR49678.1| possible Endonuclease/Exonuclease/phosphatase fa [Oceanicola
           granulosus HTCC2516]
          Length = 333

 Score = 41.3 bits (95), Expect = 0.15,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 12/52 (23%)

Query: 223 IDHIMLSPEATSLLHSARI-----------DTKPR-GWTKPSDHTPVIVSLD 262
           +D++M+SP+  +   + RI           D   R      SDH PV + LD
Sbjct: 281 LDYVMVSPDLAARYPAWRIWHPFEDPALFADPDLRHALLTASDHFPVSLDLD 332


>gi|160891380|ref|ZP_02072383.1| hypothetical protein BACUNI_03830 [Bacteroides uniformis ATCC 8492]
 gi|156858787|gb|EDO52218.1| hypothetical protein BACUNI_03830 [Bacteroides uniformis ATCC 8492]
          Length = 217

 Score = 41.3 bits (95), Expect = 0.15,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 19/39 (48%), Gaps = 2/39 (5%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           +D++ ++    + +   R+       +  SDH P++V L
Sbjct: 178 LDYVFVTKG--AKIDRYRVIQDKPENSYLSDHCPILVEL 214


>gi|157160265|ref|YP_001457583.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli HS]
 gi|170020854|ref|YP_001725808.1| endonuclease/exonuclease/phosphatase [Escherichia coli ATCC 8739]
 gi|188495117|ref|ZP_03002387.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli 53638]
 gi|194438459|ref|ZP_03070549.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli 101-1]
 gi|253774207|ref|YP_003037038.1| endonuclease/exonuclease/phosphatase [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254160867|ref|YP_003043975.1| putative DNase [Escherichia coli B str. REL606]
 gi|300929408|ref|ZP_07144877.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 187-1]
 gi|312970864|ref|ZP_07785043.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia
           coli 1827-70]
 gi|157065945|gb|ABV05200.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli HS]
 gi|169755782|gb|ACA78481.1| Endonuclease/exonuclease/phosphatase [Escherichia coli ATCC 8739]
 gi|188490316|gb|EDU65419.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli 53638]
 gi|194422683|gb|EDX38680.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli 101-1]
 gi|242376582|emb|CAQ31291.1| predicted DNase [Escherichia coli BL21(DE3)]
 gi|253325251|gb|ACT29853.1| Endonuclease/exonuclease/phosphatase [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253972768|gb|ACT38439.1| predicted DNase [Escherichia coli B str. REL606]
 gi|253976988|gb|ACT42658.1| predicted DNase [Escherichia coli BL21(DE3)]
 gi|300462608|gb|EFK26101.1| endonuclease/exonuclease/phosphatase family protein [Escherichia
           coli MS 187-1]
 gi|310336625|gb|EFQ01792.1| endonuclease/Exonuclease/phosphatase family protein [Escherichia
           coli 1827-70]
 gi|323963037|gb|EGB58608.1| endonuclease/Exonuclease/phosphatase [Escherichia coli H489]
          Length = 253

 Score = 41.3 bits (95), Expect = 0.15,   Method: Composition-based stats.
 Identities = 33/267 (12%), Positives = 65/267 (24%), Gaps = 32/267 (11%)

Query: 5   TVATWNVN-SI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN--YH 56
            V T N++        R  +  L   ++  + DI+CLQE            +++     H
Sbjct: 11  KVLTINIHKGFTAFNRRFILPELRDAVRTVSADIVCLQEV-MGAHEVHPLHVENWPDTSH 69

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
            E      ++  A        E               +     +++    R         
Sbjct: 70  YEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVP 129

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
                  +   +    R     +Q   L E +    D   +    D  +     N     
Sbjct: 130 PMTGKAIHVMCVHLGLREAHRQAQLAMLAEWVNELPDGEPVLVAGDFNDWRQKANHPLKV 189

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
                      +                                +R+D I +   + S  
Sbjct: 190 QAGLDEIFTRAHGRPARTFPVQFPL-------------------LRLDRIYVKNASASAP 230

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263
            +  + T    W   SDH P+   + +
Sbjct: 231 TALPLQT----WRHLSDHAPLSAEIHL 253


>gi|294900680|ref|XP_002777063.1| carbon catabolite repressor protein, putative [Perkinsus marinus
           ATCC 50983]
 gi|239884517|gb|EER08879.1| carbon catabolite repressor protein, putative [Perkinsus marinus
           ATCC 50983]
          Length = 320

 Score = 41.3 bits (95), Expect = 0.15,   Method: Composition-based stats.
 Identities = 43/289 (14%), Positives = 85/289 (29%), Gaps = 55/289 (19%)

Query: 9   WNVNSIRARIHNLAAWIKENNPDIICLQETKTED--KNFPFETLQSLNYHIETCGQKSYN 66
           WN+     R+  L     +++ DI+CL E    D  ++F        + +         +
Sbjct: 56  WNM-----RLPMLVKTCLDSSADILCLCE---MDSYEDFRQALGSYYDGYFAPRAGGRDD 107

Query: 67  GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDD 126
           G AI  +   +++++           R        N        +        +      
Sbjct: 108 GSAIFWRRSILKLMSAKTLHYTGGSERVAAICRLQNLYGQTFTVVGTHLYWKGSCPTQSH 167

Query: 127 KISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL 186
           +   +          L+ +EP+I  GD N   +  D +  I                 + 
Sbjct: 168 E---VDELTTELRAILDRDEPVILCGDLN-NHRDSDTFMRIRDCGMEDGFTAAGLKPPRY 223

Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR--IDHIML---SPEATSLLHSAR- 240
            ++     +                + S+    G    ID+I +   S + T  +  A  
Sbjct: 224 TSLVPPSYVL------------SSRSGSYRLLPGREDEIDYIFVGGQSSDLTLKVVDAVA 271

Query: 241 IDT--------------------KPRG---WTKPSDHTPVIVSLDIPEP 266
           ID+                      RG    +  SDH PV+  +++  P
Sbjct: 272 IDSRNDETGNGVVTGADSRDSSVAERGIPNMSHASDHLPVMCEVELTGP 320


>gi|207342066|gb|EDZ69945.1| YMR285Cp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 510

 Score = 41.3 bits (95), Expect = 0.15,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 49/192 (25%), Gaps = 3/192 (1%)

Query: 17  RIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNY--HIETCGQKSYNGVAILSK 73
           R   L    K  N D+ICLQE    + ++F  +    L Y         K++    +  +
Sbjct: 142 RSKVLLNEFKYYNSDVICLQEIDHIQFQSFWKDEFSKLGYDGQYYRNATKNHGVAIMWRR 201

Query: 74  YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKR 133
               ++   L   D +        T T N   +          + +           I  
Sbjct: 202 ELFHQVDKMLIDYDKESSESISTRTTTNNVGLVLALKFSEKVLSNLGKKSSKKCGILIGT 261

Query: 134 FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTD 193
              F       E           + +     N +  END   +           +  F  
Sbjct: 262 THLFWHPFGTYERTRQCYIVLKKMKEFMHRVNVLQNENDGDLSHWFPFFCGDFNSQPFDT 321

Query: 194 AIRATHDTHHLY 205
              +       Y
Sbjct: 322 PYLSMTSKPVHY 333


>gi|318079532|ref|ZP_07986864.1| hypothetical protein SSA3_23297 [Streptomyces sp. SA3_actF]
          Length = 72

 Score = 41.3 bits (95), Expect = 0.15,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 19/48 (39%), Gaps = 9/48 (18%)

Query: 222 RIDHIMLSPEATSLLHSARI----DTKPRGWTKPSDHTPVIVSLDIPE 265
           RID + +S      +    +    D   R     SDH PV+  L +P 
Sbjct: 28  RIDAMFVSEGVE--VLGCGVPTLEDADVRA---ASDHVPVLAVLRLPA 70


>gi|116511761|ref|YP_808977.1| metal-dependent hydrolase [Lactococcus lactis subsp. cremoris SK11]
 gi|116107415|gb|ABJ72555.1| Metal-dependent hydrolase [Lactococcus lactis subsp. cremoris SK11]
          Length = 352

 Score = 41.3 bits (95), Expect = 0.15,   Method: Composition-based stats.
 Identities = 34/269 (12%), Positives = 71/269 (26%), Gaps = 30/269 (11%)

Query: 14  IRARIHNLAAWIKENNPDIICLQET--------KTEDKNFPFETLQSL------NYHIET 59
           +++ I      IK+ NPD   +QE         +  +       L         NY    
Sbjct: 93  VKSAIQEDIRLIKKENPDFGNIQEIDWQGDRSQQVNEPQLVRAGLPDYSSVLTQNYDSAY 152

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-TQTLRIGNLYLPHGNP 118
                   +              +                  +  +   +  L + + + 
Sbjct: 153 LFYPVTKPIGKAKSGIMTYSKYEIENSTRYKLPIETNFNKFFDLDRAFSVSLLPIKNSDK 212

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
                +    + +  F+     + +    L  A    +    +           A     
Sbjct: 213 K----FVIFNTHLSAFITDQKIQKQQLVTLFDAMKKYVNKGDYVICGADYNHALAGKAHP 268

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSF----WDYYADSWSKNKGIRIDHIMLSPEATS 234
                ++      T  +R    T+   +     + Y+  +     GI ID  ++S     
Sbjct: 269 ELTWMKEFPTENLTKGMRVVAPTNAP-TVRSLDFAYHQKNPKNTFGI-IDGFLVSNNIKD 326

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            L    ID +     K SDH PV++   +
Sbjct: 327 -LKIQTIDNQ----FKSSDHQPVLMDFSL 350


>gi|296273651|ref|YP_003656282.1| endonuclease/exonuclease/phosphatase [Arcobacter nitrofigilis DSM
           7299]
 gi|296097825|gb|ADG93775.1| Endonuclease/exonuclease/phosphatase [Arcobacter nitrofigilis DSM
           7299]
          Length = 517

 Score = 41.3 bits (95), Expect = 0.15,   Method: Composition-based stats.
 Identities = 38/289 (13%), Positives = 78/289 (26%), Gaps = 50/289 (17%)

Query: 7   ATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH--IETCGQKS 64
            T+N      ++ ++   I + + D+I LQE   E K    E  ++L  +        K+
Sbjct: 55  TTYN-----TKLKHIVKVINDLDKDVIALQEV--ESKQAFDELAKNLPQYKYSIFKKYKT 107

Query: 65  YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124
            +    +     I     +      V    ++ T  I+     + N + P      S + 
Sbjct: 108 SSIGLAILSKYEISDYKLIDVKHSKVNRPILKVTLNIDNHKFIVFNNHWPSKRNEESQRV 167

Query: 125 DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ 184
                     +    + L  +   +  GD N      + +      N    T        
Sbjct: 168 LYAQ-----AIEEYIKNLNEDVDYVILGDLNSNYNEFETFKYSKLNNTYDLTGINDVLNT 222

Query: 185 KLQNMGFTDAIRATHDTHHLYSFW---------DYYADSWSKNKGIRIDHIMLSPEATSL 235
            ++    +      +D    Y+ W          Y     ++      D+I+L       
Sbjct: 223 SIKGKFISKNEILKYDKKVHYNLWLELNYNQRFSYKFRGENETP----DNIVLPKALFDN 278

Query: 236 ------------------LHSARIDT-----KPRGWTKPSDHTPVIVSL 261
                             +   +I               SDH P+  + 
Sbjct: 279 KNISYVNNSFQVFKPNYLIKDGKIFRWKIKNNIHQNIGYSDHLPIYATF 327


>gi|256838623|ref|ZP_05544133.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|256739542|gb|EEU52866.1| conserved hypothetical protein [Parabacteroides sp. D13]
          Length = 304

 Score = 41.3 bits (95), Expect = 0.15,   Method: Composition-based stats.
 Identities = 36/298 (12%), Positives = 69/298 (23%), Gaps = 55/298 (18%)

Query: 4   VTVATWNV-----------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52
           + VAT+N+           N    R   +A  I+ +  DI   QE K +           
Sbjct: 23  MVVATYNLRNANAGDSTNGNGWGQRYPYIAQLIQFHGFDIFGTQEGKYQ--QLQDLKNAM 80

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL-RIGNL 111
             Y     G+         S     +    +        +   +         L RI   
Sbjct: 81  PGYDYIGVGRDDGKQAGEHSAIFYRKEKFEVLDHGDFWLSTITDRPNKGWDAVLPRICTW 140

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
                     T     +      +     +   E   +        P            N
Sbjct: 141 GKFRDKQTGFTFLFFNL-----HMDHIGVQARAESAKLILKKLKEFP-EKLPAILTGDFN 194

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK--GIRIDHIMLS 229
                                      +  +  +       +++  ++    RIDH+ L+
Sbjct: 195 VDQHNESYLLLDNSGIMRDSYQIADFRYVPNGTF-------NAFHADRKTDSRIDHLFLT 247

Query: 230 PEATSLLHSARIDTKPRGWTK------------------------PSDHTPVIVSLDI 263
            E    +    + T                               PSDH PV++ +++
Sbjct: 248 KEFD--VKKYGVLTDTYRSEAKDAKNEQNANFPKEVSMQKHVARVPSDHFPVMIVVEV 303


>gi|323303482|gb|EGA57276.1| Ngl2p [Saccharomyces cerevisiae FostersB]
          Length = 515

 Score = 41.3 bits (95), Expect = 0.15,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 49/192 (25%), Gaps = 3/192 (1%)

Query: 17  RIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNY--HIETCGQKSYNGVAILSK 73
           R   L    K  N D+ICLQE    + ++F  +    L Y         K++    +  +
Sbjct: 142 RSKVLLNEFKYYNSDVICLQEIDHIQFQSFWKDEFSKLGYDGQYYRNATKNHGVAIMWRR 201

Query: 74  YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKR 133
               ++   L   D +        T T N   +          + +           I  
Sbjct: 202 ELFHQVDXMLIDYDKESSESISARTTTNNVGLVLALKFSEKVLSNLGKKSSKKCGILIGT 261

Query: 134 FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTD 193
              F       E           + +     N +  END   +           +  F  
Sbjct: 262 THLFWHPFGTYERTRQCYIVLKKMKEFMHRVNVLQNENDGDLSHWFPFFCGDFNSQPFDT 321

Query: 194 AIRATHDTHHLY 205
              +       Y
Sbjct: 322 PYLSMTSKPVHY 333


>gi|221107207|ref|XP_002170688.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
          Length = 495

 Score = 41.3 bits (95), Expect = 0.15,   Method: Composition-based stats.
 Identities = 44/312 (14%), Positives = 89/312 (28%), Gaps = 58/312 (18%)

Query: 4   VTVATWNV------NS---------------IRA--RIHNLAAWIKENNPDIICLQETKT 40
           + + T+N+      +S               ++   R++ L   +   N DI+CLQE   
Sbjct: 189 LRIITYNILADVFCDSEYASEVLYPYCPKYALKLSYRMNLLIKELIGFNADILCLQE--C 246

Query: 41  EDKNFP---FETLQSLNYH----------------IETCGQKSYNGVAILSKYQPIEIVT 81
           E K F       LQ  NY                      +  Y     +S  + + +  
Sbjct: 247 ELKMFQVYLKPVLQIYNYEGYLNLKTGKMPEGEAIFIRKNKFIYLKDFSISVKEALHLEC 306

Query: 82  HLPGDDLDVQARFIEATFTINTQ-TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQ 140
           +             +     ++   + I      +G  +             + +R    
Sbjct: 307 NKDILAAIQNNDIFDLLCKKSSIAQIHILAENKTNGRHLCIFNTHLYFKPGAQLIRVLQI 366

Query: 141 RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA--CFTLEVRQSFQKLQNMGFTDAIRAT 198
            + L        ++        C +    + D    F  E   S + L N+ +       
Sbjct: 367 AVLLNYVEKVLKEHQTKCSLIMCGDYNSKKGDPLLQFLNEKSYSLKLLYNLDYVLQCPFQ 426

Query: 199 HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT-------SLLHSARIDTKPRGWTKP 251
            +    +  +  +   + +     +D+I +    T        L     +         P
Sbjct: 427 LENVTGFPLFTVFVPQFRET----LDYIFVDESFTLEGFVPIPLAEELEVFCALPSVVSP 482

Query: 252 SDHTPVIVSLDI 263
           SDH P+IV L+ 
Sbjct: 483 SDHIPLIVDLNW 494


>gi|294054975|ref|YP_003548633.1| Endonuclease/exonuclease/phosphatase [Coraliomargarita akajimensis
           DSM 45221]
 gi|293614308|gb|ADE54463.1| Endonuclease/exonuclease/phosphatase [Coraliomargarita akajimensis
           DSM 45221]
          Length = 299

 Score = 41.3 bits (95), Expect = 0.16,   Method: Composition-based stats.
 Identities = 35/251 (13%), Positives = 62/251 (24%), Gaps = 16/251 (6%)

Query: 18  IHNLAAWIKENNPDIICLQETKTED--KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75
            H L   I    PD++ +QE    +  +    + L +L     +      +      ++ 
Sbjct: 56  KHALRQAILSVRPDVLVVQEIGGAEFLEELRLD-LANLGLEYSSAIHMRGSDTV---RHV 111

Query: 76  PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135
            +  +             F             +   +   G            S      
Sbjct: 112 AVLSMVEPQSIVRHADLNFAYMERRQAVSRGLLELSFEGRGGQNFRLFAVHLKSRRTTEK 171

Query: 136 RFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAI 195
                 L          +  I     D   P +   D           +  Q        
Sbjct: 172 ADPQSVLWRTREAEACRNRIIERHDGDGNLPYLVVGDFNDHPRSSTLRRFYQRGERELGH 231

Query: 196 --RATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS--ARIDTKPRGWTKP 251
              A      +++ +     S+S   G      + SPE    + +  A I   PR     
Sbjct: 232 WVPAADSRGQVWTHFYAREYSYSTVDG-----FVASPELLPSIKNGRATIVDDPRTL-SA 285

Query: 252 SDHTPVIVSLD 262
           SDH  V + LD
Sbjct: 286 SDHRMVYLDLD 296


>gi|237510534|ref|ZP_04523249.1| metal-dependent hydrolase [Burkholderia pseudomallei MSHR346]
 gi|235002739|gb|EEP52163.1| metal-dependent hydrolase [Burkholderia pseudomallei MSHR346]
          Length = 338

 Score = 41.3 bits (95), Expect = 0.16,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 17/46 (36%)

Query: 4  VTVATWNVNSIRARIHNLAAW-----------IKENNPDIICLQET 38
          + +AT+N++        L AW           + E   D+I LQE 
Sbjct: 53 LRIATYNIHG------GLGAWTASAAERIAVVLDELRADVIALQEV 92


>gi|189235069|ref|XP_974729.2| PREDICTED: similar to nocturnin CG31299-PE [Tribolium castaneum]
          Length = 397

 Score = 41.3 bits (95), Expect = 0.16,   Method: Composition-based stats.
 Identities = 44/269 (16%), Positives = 71/269 (26%), Gaps = 27/269 (10%)

Query: 9   WNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGV 68
           WN     +R   +   I E  PDIICLQE   +  NF    L +  Y      +     V
Sbjct: 136 WN-----SRKFRIIEEIVEYCPDIICLQEV--DHFNFLKYILGTQGYTGVFYPKPDSPCV 188

Query: 69  AILSKYQPIEIVTHLPGDDL---DVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYD 125
            I     P         +     ++++R +E     + Q   + NL +            
Sbjct: 189 YISGNNGPDGCAIFYRTNKFDVINIESRILEIWRVQSNQVALLANLRIKETGQEVCVTTT 248

Query: 126 DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ-PHDCYNPIIWENDACFTLEVRQSFQ 184
              +    FL         +     +      P      +N    E      L       
Sbjct: 249 HLKARQGAFLSTLRNEQGKDLLQFVSQHCGPRPVVICGDFNAEPIEPIYSTILSDEYLNL 308

Query: 185 KLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK 244
                    +   +      Y+ W    +    +    ID+I            A +   
Sbjct: 309 GSAYADCDSSSANSAAREPPYTTWKIRDEGEVCHT---IDYIFYKKGCLE--VEA-VLEL 362

Query: 245 PRGWT----------KPSDHTPVIVSLDI 263
           P G             PSDH  ++    I
Sbjct: 363 PTGEEIGEDRVPSFSYPSDHFSLVCDFKI 391


>gi|167915276|ref|ZP_02502367.1| Metal-dependent hydrolase [Burkholderia pseudomallei 112]
          Length = 287

 Score = 41.3 bits (95), Expect = 0.16,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 17/46 (36%)

Query: 4  VTVATWNVNSIRARIHNLAAW-----------IKENNPDIICLQET 38
          + +AT+N++        L AW           + E   D+I LQE 
Sbjct: 2  LRIATYNIHG------GLGAWTASAAERIAVVLDELRADVIALQEV 41


>gi|167906917|ref|ZP_02494122.1| Metal-dependent hydrolase [Burkholderia pseudomallei NCTC 13177]
          Length = 296

 Score = 41.3 bits (95), Expect = 0.16,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 17/46 (36%)

Query: 4  VTVATWNVNSIRARIHNLAAW-----------IKENNPDIICLQET 38
          + +AT+N++        L AW           + E   D+I LQE 
Sbjct: 11 LRIATYNIHG------GLGAWTAGAAERIAVVLDELRADVIALQEV 50


>gi|167830020|ref|ZP_02461491.1| Metal-dependent hydrolase [Burkholderia pseudomallei 9]
          Length = 290

 Score = 41.3 bits (95), Expect = 0.16,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 17/46 (36%)

Query: 4  VTVATWNVNSIRARIHNLAAW-----------IKENNPDIICLQET 38
          + +AT+N++        L AW           + E   D+I LQE 
Sbjct: 5  LRIATYNIHG------GLGAWTASAAERIAVVLDELRADVIALQEV 44


>gi|167723990|ref|ZP_02407226.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
          pseudomallei DM98]
          Length = 296

 Score = 41.3 bits (95), Expect = 0.16,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 17/46 (36%)

Query: 4  VTVATWNVNSIRARIHNLAAW-----------IKENNPDIICLQET 38
          + +AT+N++        L AW           + E   D+I LQE 
Sbjct: 11 LRIATYNIHG------GLGAWTASAAERIAVVLDELRADVIALQEV 50


>gi|146305200|ref|YP_001185665.1| endonuclease/exonuclease/phosphatase [Pseudomonas mendocina ymp]
 gi|145573401|gb|ABP82933.1| Endonuclease/exonuclease/phosphatase [Pseudomonas mendocina ymp]
          Length = 290

 Score = 41.3 bits (95), Expect = 0.16,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 26/66 (39%), Gaps = 14/66 (21%)

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           +F  +            +DHI+LS E    L    + ++P      SDH PV V + +P 
Sbjct: 229 TFPSWRPQ-------RCLDHILLSSELE--LGRVDVLSQP-----ISDHLPVAVEIRLPG 274

Query: 266 PRKKQQ 271
            +    
Sbjct: 275 AQNAAP 280


>gi|53722408|ref|YP_111393.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
          pseudomallei K96243]
 gi|52212822|emb|CAH38854.1| putative Endonuclease/Exonuclease/phosphatase family protein
          [Burkholderia pseudomallei K96243]
          Length = 338

 Score = 41.3 bits (95), Expect = 0.16,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 17/46 (36%)

Query: 4  VTVATWNVNSIRARIHNLAAW-----------IKENNPDIICLQET 38
          + +AT+N++        L AW           + E   D+I LQE 
Sbjct: 53 LRIATYNIHG------GLGAWTASAAERIAVVLDELRADVIALQEV 92


>gi|254186690|ref|ZP_04893206.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
          pseudomallei Pasteur 52237]
 gi|157934374|gb|EDO90044.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
          pseudomallei Pasteur 52237]
          Length = 338

 Score = 41.3 bits (95), Expect = 0.16,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 17/46 (36%)

Query: 4  VTVATWNVNSIRARIHNLAAW-----------IKENNPDIICLQET 38
          + +AT+N++        L AW           + E   D+I LQE 
Sbjct: 53 LRIATYNIHG------GLGAWTASAAERIAVVLDELRADVIALQEV 92


>gi|126444014|ref|YP_001062967.1| metal-dependent hydrolase [Burkholderia pseudomallei 668]
 gi|126223505|gb|ABN87010.1| metal-dependent hydrolase [Burkholderia pseudomallei 668]
          Length = 338

 Score = 41.3 bits (95), Expect = 0.16,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 17/46 (36%)

Query: 4  VTVATWNVNSIRARIHNLAAW-----------IKENNPDIICLQET 38
          + +AT+N++        L AW           + E   D+I LQE 
Sbjct: 53 LRIATYNIHG------GLGAWTASAAERIAVVLDELRADVIALQEV 92


>gi|134282657|ref|ZP_01769361.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
          pseudomallei 305]
 gi|226199100|ref|ZP_03794662.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
          pseudomallei Pakistan 9]
 gi|254183777|ref|ZP_04890369.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
          pseudomallei 1655]
 gi|134246214|gb|EBA46304.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
          pseudomallei 305]
 gi|184214310|gb|EDU11353.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
          pseudomallei 1655]
 gi|225928875|gb|EEH24900.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
          pseudomallei Pakistan 9]
          Length = 338

 Score = 41.3 bits (95), Expect = 0.16,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 17/46 (36%)

Query: 4  VTVATWNVNSIRARIHNLAAW-----------IKENNPDIICLQET 38
          + +AT+N++        L AW           + E   D+I LQE 
Sbjct: 53 LRIATYNIHG------GLGAWTASAAERIAVVLDELRADVIALQEV 92


>gi|260781343|ref|XP_002585776.1| hypothetical protein BRAFLDRAFT_111142 [Branchiostoma floridae]
 gi|229270818|gb|EEN41787.1| hypothetical protein BRAFLDRAFT_111142 [Branchiostoma floridae]
          Length = 241

 Score = 41.3 bits (95), Expect = 0.16,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 19/55 (34%), Gaps = 13/55 (23%)

Query: 2  SVVT-----------VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDK 43
          S +            +AT NV  +        L   +     D+ CLQETK   +
Sbjct: 4  STMKMSAQSIRFKIQIATLNVRGLSQISKRQELDELLARKRVDMCCLQETKVARE 58


>gi|260781277|ref|XP_002585745.1| hypothetical protein BRAFLDRAFT_111271 [Branchiostoma floridae]
 gi|229270783|gb|EEN41756.1| hypothetical protein BRAFLDRAFT_111271 [Branchiostoma floridae]
          Length = 409

 Score = 41.3 bits (95), Expect = 0.16,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 19/55 (34%), Gaps = 13/55 (23%)

Query: 2  SVVT-----------VATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDK 43
          S +            +AT NV  +        L   +     D+ CLQETK   +
Sbjct: 4  STMKMSAQSIRFKIQIATLNVRGLSQISKRQELDELLARKRVDMCCLQETKVARE 58


>gi|229917556|ref|YP_002886202.1| Endonuclease/exonuclease/phosphatase [Exiguobacterium sp. AT1b]
 gi|229468985|gb|ACQ70757.1| Endonuclease/exonuclease/phosphatase [Exiguobacterium sp. AT1b]
          Length = 1168

 Score = 41.3 bits (95), Expect = 0.16,   Method: Composition-based stats.
 Identities = 15/81 (18%), Positives = 27/81 (33%), Gaps = 10/81 (12%)

Query: 185  KLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK 244
            ++        +         YS+  Y  +S        +DHI++S    +      I   
Sbjct: 978  QIFKGDLMTNMVEKVPAVDRYSYV-YQGNSQV------LDHILVSNRLAASTKIDMIHVN 1030

Query: 245  PRGWT---KPSDHTPVIVSLD 262
                    + SDH PV+  +D
Sbjct: 1031 SDFTEMSGRASDHDPVLAQID 1051


>gi|183179612|ref|ZP_02957823.1| hypothetical protein A51_B2651 [Vibrio cholerae MZO-3]
 gi|183013023|gb|EDT88323.1| hypothetical protein A51_B2651 [Vibrio cholerae MZO-3]
          Length = 869

 Score = 41.3 bits (95), Expect = 0.16,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 29/77 (37%), Gaps = 26/77 (33%)

Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT------------------ 249
           W Y   S++   G  +DH+++SP   + +  A  D    G                    
Sbjct: 775 WSY---SFNDEVGA-LDHLLVSPSLKNKVVDAT-DWHINGAESTLFDYNDEFKGNLPKYN 829

Query: 250 ---KPSDHTPVIVSLDI 263
              + SDH P ++ L+I
Sbjct: 830 DQFRASDHDPAVLELNI 846


>gi|147858617|emb|CAN81007.1| hypothetical protein VITISV_011582 [Vitis vinifera]
          Length = 1152

 Score = 41.3 bits (95), Expect = 0.16,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 18/45 (40%), Gaps = 4/45 (8%)

Query: 217 KNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
            N+   R+D  ++SP              PR     SDH PV++ 
Sbjct: 671 NNQSWARLDRFLVSPSWLDHFSDVLQRRLPR---PLSDHFPVLLE 712


>gi|115704992|ref|XP_796769.2| PREDICTED: similar to endonuclease-reverse transcriptase
           [Strongylocentrotus purpuratus]
 gi|115952010|ref|XP_001187856.1| PREDICTED: similar to endonuclease-reverse transcriptase
           [Strongylocentrotus purpuratus]
          Length = 765

 Score = 41.3 bits (95), Expect = 0.16,   Method: Composition-based stats.
 Identities = 32/256 (12%), Positives = 64/256 (25%), Gaps = 20/256 (7%)

Query: 3   VVTVATWNVNSIRAR--IHNLAAWIKENNPDIICLQETKT--EDKNFPFETLQSLNYHIE 58
           V+ + TWNV +++       L    +  + DI+ L ET     +     E    L   + 
Sbjct: 112 VLNIGTWNVRTLKKAGHWDILLEEARRFDLDILGLCETHLTGTETLINKEEYSIL---LS 168

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
           +    +      +   Q I                            +++      H   
Sbjct: 169 SRKDNTSREGVGIMISQQILHCLVSYEAISPRIITAKFNMKEGIMNIIQVYAPTSAHSEQ 228

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
            +   YD     I++  R  +  +  +       D+ +       Y            LE
Sbjct: 229 ESDLFYDALQLHIQKVPRKENIIVIGDLNAKVGADHGVWAPTLGKYGLGQINRRGEKLLE 288

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
                +      +       H      ++        ++     ID I+   E      +
Sbjct: 289 FCMLHEMAVCNTYFQ-----HKECRRATWTSPRGHYRNQ-----IDFIITKLENIKTFQN 338

Query: 239 ARIDTKPRGWTKPSDH 254
                        SDH
Sbjct: 339 C---RSYCSADIGSDH 351


>gi|270295490|ref|ZP_06201691.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|270274737|gb|EFA20598.1| conserved hypothetical protein [Bacteroides sp. D20]
          Length = 254

 Score = 41.3 bits (95), Expect = 0.16,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 19/39 (48%), Gaps = 2/39 (5%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           +D++ ++    + +   R+       +  SDH P++V L
Sbjct: 215 LDYVFVTKG--AKIDRYRVIQDKPENSYLSDHCPILVEL 251


>gi|209881833|ref|XP_002142354.1| endonuclease/exonuclease/phosphatase family protein
           [Cryptosporidium muris RN66]
 gi|209557960|gb|EEA08005.1| endonuclease/exonuclease/phosphatase family protein
           [Cryptosporidium muris RN66]
          Length = 750

 Score = 41.3 bits (95), Expect = 0.16,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 28/74 (37%), Gaps = 19/74 (25%)

Query: 2   SVVTVATWNV-NSIRARIHNL-------AAW----------IKENNPDIICLQETKTED- 42
           S   V +WN+   I A             +W          I  + PDI+CLQE +TE  
Sbjct: 363 SRFKVLSWNILAEIYASQEAFPHCDAYMLSWTYRKTRIIVEILSHQPDIVCLQEVQTEHF 422

Query: 43  KNFPFETLQSLNYH 56
            +F    LQ   Y 
Sbjct: 423 DDFFKPILQQYGYE 436


>gi|321458623|gb|EFX69688.1| hypothetical protein DAPPUDRAFT_113436 [Daphnia pulex]
          Length = 726

 Score = 41.3 bits (95), Expect = 0.16,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 2/38 (5%)

Query: 3   VVTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQET 38
           ++ VA+ N+  I    R+  L  +   N  D+ICLQE 
Sbjct: 275 IMKVASINIARISTPERLQLLLNYCFSNEFDVICLQEV 312


>gi|218195535|gb|EEC77962.1| hypothetical protein OsI_17322 [Oryza sativa Indica Group]
          Length = 1104

 Score = 41.3 bits (95), Expect = 0.16,   Method: Composition-based stats.
 Identities = 39/261 (14%), Positives = 86/261 (32%), Gaps = 30/261 (11%)

Query: 1   MSVVTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           MS ++V  WNV  +   A+   +   +  ++  ++CLQE+K   +      +  L     
Sbjct: 1   MSRLSVLVWNVRGLNNPAKRRVVKESVVNSHASVVCLQESKL--EVVDLLVIHEL----- 53

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
            CG    + VA+ + +    ++    G         +             GN      + 
Sbjct: 54  -CGLDFDDFVALPASHTRGGVIVAWKGSVFRGSQVHLGQWSVTAKLEWTAGNHSCFLTSV 112

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
                 ++KI +++             E  + AGD+N+I    D  N  +          
Sbjct: 113 YGPQDDNEKILFLEELAEIRG---ICGEVWLVAGDFNLIAAAADKNNSRVNRR------- 162

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
                   +N      ++  +     Y++             +++D +++S E       
Sbjct: 163 ---LMNAFRNKINELELKELYLFGRRYTWSSEQ----QIPTLVKLDRVLVSTEWEDAFPD 215

Query: 239 ARIDTKPRGWTKPSDHTPVIV 259
           A    +    +  SDH  +++
Sbjct: 216 A--HLQALSSSS-SDHCALLL 233


>gi|330799773|ref|XP_003287916.1| hypothetical protein DICPUDRAFT_47628 [Dictyostelium purpureum]
 gi|325082050|gb|EGC35545.1| hypothetical protein DICPUDRAFT_47628 [Dictyostelium purpureum]
          Length = 576

 Score = 41.3 bits (95), Expect = 0.16,   Method: Composition-based stats.
 Identities = 49/321 (15%), Positives = 86/321 (26%), Gaps = 63/321 (19%)

Query: 4   VTVA---TWNVNS-IRARIHNLAAWIKENNPDIICLQETK----TEDKNFPFETLQSL-- 53
           + V    TWN N   R R   +A  I   +PDIIC QE +    T +  F     +    
Sbjct: 256 IKVMSYNTWNFNDPWRERRVKMADVILNESPDIICFQEIRYSSWTSEAPFKSSVRKGEER 315

Query: 54  ---------------NYHIETCGQKSYNGVAI-------------LSKYQPIEIVTHLPG 85
                           YH        YN                 ++    I++   +  
Sbjct: 316 NQVQHIWKLLSERNQKYHFTYLPSMVYNTNTGLQFEGLAIFSKHPITDISSIKLSREVMN 375

Query: 86  DDLDVQARFIEATFTINTQTLRIGNLYLPHG-NPITSTKYDDKISWIKRFLRFASQRLEL 144
            D   Q   + A   +    L I             S +   +              +  
Sbjct: 376 ADDAHQRSLLRAQVYLKQHDLNINVFTSHFSLEAEGSKRNAYESLKYINEFPKPHLFMGD 435

Query: 145 EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL 204
                 A     +   ++  N      D       R+  +      + D +R    +   
Sbjct: 436 LNLEPSANAIQYLIGDYEINNHAGNLKDTWMEYSSRKLEENSNQDIYLDQLRNQVHSDCK 495

Query: 205 YSFWDYYAD-SWSKNKGI---RIDHIMLSPEATSLLHSARI---DTKPRGWT-------- 249
            +  DY    ++    G    RID++  S +    +    I     +    +        
Sbjct: 496 IT--DYLNGYTFPTLYGAPNKRIDYLFRSNDNNLKVLDFHIKGRCKEIPALSSSSSKTST 553

Query: 250 -------KPSDHTPVIVSLDI 263
                   PSDHT ++ + +I
Sbjct: 554 NSDSNHLYPSDHTSIVTTFEI 574


>gi|254444166|ref|ZP_05057642.1| endonuclease/exonuclease/phosphatase family [Verrucomicrobiae
           bacterium DG1235]
 gi|198258474|gb|EDY82782.1| endonuclease/exonuclease/phosphatase family [Verrucomicrobiae
           bacterium DG1235]
          Length = 307

 Score = 41.3 bits (95), Expect = 0.16,   Method: Composition-based stats.
 Identities = 38/293 (12%), Positives = 72/293 (24%), Gaps = 54/293 (18%)

Query: 3   VVTVATWNVNSIR--ARIHNLAA-------------------WIKENNPDIICLQETKTE 41
            + VAT+N   +R    +  +                      I    PD++ +QE  +E
Sbjct: 30  TLRVATYN---LRNYLAMDRIVEGDFRVNYPKPESEKTVVRESILAVEPDLLAIQEIGSE 86

Query: 42  ------DKNFPFETLQSLNYHI--ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR 93
                   +   E L    Y +       +    +   +        T +       + +
Sbjct: 87  ELLLELRDDLANEGLVYEGYFLLEADDQTRKIGALWNGALKVRPIAHTDMSFPFFGDRKK 146

Query: 94  FIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGD 153
                  +         L L   +  +    D +     R     ++         F   
Sbjct: 147 IKRGLLELQLDDFGGEPLSLFVVHLKSRYTSDKRDPKSARRRTSEAEAARDRILERFPDP 206

Query: 154 YNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDA---IRATHDTHHLYSFWDY 210
                      N     +     LE       +      ++       +     YS    
Sbjct: 207 SVSRFIIMGDLNDYRHTSSVRRFLERGDVRISVIQEARDESGLIWTHFYKKGGEYSL--- 263

Query: 211 YADSWSKNKGIRIDHIMLSPEATSL--LHSARIDTKPRGWTKPSDHTPVIVSL 261
                       ID+I+ SP       + SA  D++     + SDH  V   L
Sbjct: 264 ------------IDYILCSPGLEDASEMKSAIYDSENYY--QGSDHRLVWTEL 302


>gi|147773403|emb|CAN73438.1| hypothetical protein VITISV_040987 [Vitis vinifera]
          Length = 228

 Score = 41.3 bits (95), Expect = 0.16,   Method: Composition-based stats.
 Identities = 16/129 (12%), Positives = 36/129 (27%), Gaps = 7/129 (5%)

Query: 132 KRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191
             ++ +       +   I A  Y    +                +LE   S   + +   
Sbjct: 48  PEYVPYDVNGKYGQLFDIIAQRYKENMEERSLTLQKQLRRYVPISLEAEISSVVMNHCVL 107

Query: 192 TDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP 251
              +         +++    +         R+D  ++SP       +  I    R     
Sbjct: 108 PSPLVDLPLQGGSFTW----SGGLYNQAWARLDRFLVSPSWLDQFSN-GIQK--RLPRPI 160

Query: 252 SDHTPVIVS 260
           SDH P+++ 
Sbjct: 161 SDHFPILIE 169


>gi|148975846|ref|ZP_01812635.1| Endonuclease/exonuclease/phosphatase [Vibrionales bacterium SWAT-3]
 gi|145964591|gb|EDK29844.1| Endonuclease/exonuclease/phosphatase [Vibrionales bacterium SWAT-3]
          Length = 430

 Score = 41.3 bits (95), Expect = 0.16,   Method: Composition-based stats.
 Identities = 34/287 (11%), Positives = 84/287 (29%), Gaps = 45/287 (15%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNP---------DIICLQETKTEDKNFPFETLQS 52
           + + + T+NV      +  +  ++ + +          D++ +QE    +          
Sbjct: 165 NSINILTYNVW----LLPYIGEYMNDRDIRIAEAVKSHDVVFMQEVFRRENELRLNADMR 220

Query: 53  LNYHIETCG----QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108
           L++   +        +     +++  +   +       D             + T+ ++ 
Sbjct: 221 LHFQYVSHKLDGGGSNTYDGGVITYSKYPIVEQAQHVFDNCRGTDCAADKGVLYTKIIKD 280

Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQR-----LELEEPLIFAGDYNIIPQPHDC 163
              Y      + S    +  +   R +           L   EP+IF GD+NI       
Sbjct: 281 SRPYHLFNLHLGSWNSREHRNIRMRQVGEILAFVEQLGLPENEPVIFGGDFNIAKHKFPL 340

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223
               +          ++ S     +      +  +  +                    R+
Sbjct: 341 DFTQMLRVLDLQEPPLKGSLAHSYDPLVNQNLSDSDQSAQE-----------------RL 383

Query: 224 DHIMLSPEATSLLHSARI------DTKPRGWTKPSDHTPVIVSLDIP 264
           D+++ S   + +  S++I      D    G    SDH  V    ++P
Sbjct: 384 DYLLYSNNGSVVASSSKIEVLRNFDDDMWGVWDLSDHLAVSARFEVP 430


>gi|242771336|ref|XP_002477822.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
 gi|218721441|gb|EED20859.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
          Length = 1077

 Score = 41.3 bits (95), Expect = 0.17,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 3/41 (7%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           ID +  S    + + S   DTKP  W    DH P+    ++
Sbjct: 181 IDLVWASHNLANRVVSC--DTKPEWWYGA-DHVPISTQFNL 218


>gi|242827044|ref|XP_002488757.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
 gi|218712149|gb|EED11576.1| reverse transcriptase, putative [Talaromyces stipitatus ATCC 10500]
          Length = 1977

 Score = 41.3 bits (95), Expect = 0.17,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 68/254 (26%), Gaps = 19/254 (7%)

Query: 26  KENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPG 85
           +     +I +QE    + N       SL + +        N     +K   + +  +   
Sbjct: 741 RALRASVIAIQEPWRNELNNTTHQPASLTHQLLYPKPNDNNNNTNNNKRARVALFVNKSI 800

Query: 86  DDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELE 145
           +        I   + I    +R       + N      Y   I    R   F     EL 
Sbjct: 801 NPASWSHTVISPDYQIL--HIRYQRCLHSNSNSEPHDLYIHNIYNEPRSTTFTHIDRELT 858

Query: 146 EPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY 205
                    +I+    +  +   W        E      ++ +    +          L 
Sbjct: 859 RLGCSRTTAHIVLGDMN-AHHPAWGGPGTKIDEQATELLEIMDRHGIELAT----EEGLV 913

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP-SDHTPVIVSLDIP 264
           ++      S S      ID   LS      L    +  +     +  SDH P+   +DI 
Sbjct: 914 TW--ERGQSQST-----IDLTFLSTTLFHRL----VLHERADEIQHDSDHWPIRTQIDID 962

Query: 265 EPRKKQQDSTSQNM 278
            P  + +   +   
Sbjct: 963 TPTHEPRRRRNWAA 976


>gi|148260431|ref|YP_001234558.1| endonuclease/exonuclease/phosphatase [Acidiphilium cryptum JF-5]
 gi|326403624|ref|YP_004283706.1| hypothetical protein ACMV_14770 [Acidiphilium multivorum AIU301]
 gi|146402112|gb|ABQ30639.1| Endonuclease/exonuclease/phosphatase [Acidiphilium cryptum JF-5]
 gi|325050486|dbj|BAJ80824.1| hypothetical protein ACMV_14770 [Acidiphilium multivorum AIU301]
          Length = 204

 Score = 41.3 bits (95), Expect = 0.17,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 45/126 (35%), Gaps = 8/126 (6%)

Query: 4   VTVATWNVNSIR---ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           + + +WN+  +R   A    +AA I++  PD++ +QE    +       L    +     
Sbjct: 1   MRLISWNL--LRRVGAEAREVAALIEDYRPDLMLMQE--ATESIAQVTDLCG-GWFYRAP 55

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
            Q    G+A+ S     E  T      +            +  Q +   N++L HG  + 
Sbjct: 56  MQGRIYGLAVWSPAPLAEPGTVRLPASVMPGRVPPRLALLVEAQGITFANVHLSHGQMLN 115

Query: 121 STKYDD 126
             +   
Sbjct: 116 RLQLRH 121


>gi|306832641|ref|ZP_07465780.1| RgfB protein [Streptococcus bovis ATCC 700338]
 gi|304425249|gb|EFM28376.1| RgfB protein [Streptococcus bovis ATCC 700338]
          Length = 276

 Score = 41.3 bits (95), Expect = 0.17,   Method: Composition-based stats.
 Identities = 43/276 (15%), Positives = 80/276 (28%), Gaps = 26/276 (9%)

Query: 5   TVATWN------VNSIRARIHNLAAWIKENNPDIICLQE---------TKTED--KNFPF 47
              T N       NS++ ++ +LA  I   N D+ICLQE         TK  D  +  P 
Sbjct: 8   KFLTLNTHSWLEANSLK-KLFDLAETIYSENYDVICLQEINQDIRGLLTKEVDGYEKLPG 66

Query: 48  E-TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
              L   NY ++        G      +    I      + + + ++       I    +
Sbjct: 67  SPALHRDNYALQLVNYLRSQGRYYYWSWAYNHIGYEKYNEGVVILSKTPIKVNDILVSDV 126

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
                +      +  T+ D K   +         +    E           P+P      
Sbjct: 127 DDETDFHTRRVLVAETEIDQKPITVVSLHMSWFGKGFESEWQKLETALLDSPKPLVLMGD 186

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226
                D      +  S   LQ+                ++  +         + +++DH+
Sbjct: 187 FNNPTDTAGYDMILNSPLDLQDSHKVAK-----KVQGDHTIIEDIDGWEGNKQSLKVDHV 241

Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
             S      + S+ +          SDH  + V L+
Sbjct: 242 FTSKGID--ILSSTVTFDGGEAPIVSDHFGLAVELN 275


>gi|260430974|ref|ZP_05784945.1| endonuclease/exonuclease/phosphatase family protein [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260414802|gb|EEX08061.1| endonuclease/exonuclease/phosphatase family protein [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 337

 Score = 41.3 bits (95), Expect = 0.17,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 12/53 (22%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRG------------WTKPSDHTPVIVSLDI 263
           +D+IM+SP+  +   + RI    R                 SDH PV + +D+
Sbjct: 285 LDYIMISPDLRARRPAWRIWHPFRDEHCWSVPELRDALVTASDHFPVTLDIDL 337


>gi|167622812|ref|YP_001673106.1| endonuclease/exonuclease/phosphatase [Shewanella halifaxensis
           HAW-EB4]
 gi|167352834|gb|ABZ75447.1| Endonuclease/exonuclease/phosphatase [Shewanella halifaxensis
           HAW-EB4]
          Length = 377

 Score = 41.3 bits (95), Expect = 0.17,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 22/54 (40%), Gaps = 13/54 (24%)

Query: 223 IDHIMLSPEATSLLHS-----ARIDTKPRGWTKPS--------DHTPVIVSLDI 263
           +D+I+LS +     H          T+ R    PS        DH PVI +L I
Sbjct: 322 LDYILLSADFDPSYHKSIAEVCDYHTEDRHLVNPSFERDSHSSDHAPVICTLRI 375


>gi|254828780|ref|ZP_05233467.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes FSL
           N3-165]
 gi|258601187|gb|EEW14512.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes FSL
           N3-165]
          Length = 256

 Score = 41.3 bits (95), Expect = 0.17,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 31/93 (33%), Gaps = 3/93 (3%)

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230
            D     +        +       I   H    + SF D+     S N+  +ID+I +S 
Sbjct: 166 GDFNTEPDTPTYNFITKKYQDAQLISQKHAKGPIGSFHDFRPL-RSINELEKIDYIFVSE 224

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           E    + +             SDH PV  +LD 
Sbjct: 225 EF--QVCTYETIVDEVDGFSASDHFPVTANLDW 255


>gi|270295842|ref|ZP_06202042.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|270273246|gb|EFA19108.1| conserved hypothetical protein [Bacteroides sp. D20]
          Length = 287

 Score = 40.9 bits (94), Expect = 0.18,   Method: Composition-based stats.
 Identities = 35/290 (12%), Positives = 74/290 (25%), Gaps = 66/290 (22%)

Query: 6   VATWNVNSIRARIHNLAAWIKE--------------NNPDIICLQET-KTEDKNFPFETL 50
           V ++N+     R  NL   +                 + DI+  QE    + ++   + L
Sbjct: 31  VMSFNI-----RYDNLEDSLDNWQYRKDRAANAIRFYDVDILGTQEVLHNQLEDL-KQRL 84

Query: 51  QSLN--------------YHIETCGQKSYN----GVAILSKYQPIEIVTHLPGDDLDVQA 92
                             Y      +  +N    G   LS+   +       G    + +
Sbjct: 85  PEYGVIGVGREDGKEKGEYSALWYKKDRFNLLDSGYFWLSETPEVAGSKGWDGACERIAS 144

Query: 93  RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG 152
                      +   +       G                  +      L    P++  G
Sbjct: 145 WAKLQDKVSGKEFFALNTHLDHVGVAA--------RREGISLMLDKVNELSGNLPVVVTG 196

Query: 153 DYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYA 212
           D+N  P+     +     N      E     ++   + +  A          Y   D   
Sbjct: 197 DFNASPESDVIKHVTDPSN-----PEHLTDARQASAIVYGPAWSFHDFGKIPY---DKRP 248

Query: 213 DSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
                     ID++ +       +    +  +       SDH P++V+++
Sbjct: 249 L---------IDYVFVRNGL--KVLRYGVLAETENNAFLSDHAPILVTVE 287


>gi|229141809|ref|ZP_04270337.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST26]
 gi|228641645|gb|EEK97948.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST26]
          Length = 352

 Score = 40.9 bits (94), Expect = 0.18,   Method: Composition-based stats.
 Identities = 47/274 (17%), Positives = 82/274 (29%), Gaps = 34/274 (12%)

Query: 11  VNSIRARIHNLAAWIKENNPDIICLQET--K------TEDKNFPFETLQSL------NYH 56
           VN     + N+ ++++  N D   LQE   K        +  F  + L         NY 
Sbjct: 91  VN-----LKNMLSFLQNENSDFALLQEVDIKSLRSFDVNEHEFLKKGLPDYVSSFGKNYD 145

Query: 57  IETCGQKSYNGVAI-------LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
            +       N +          SKY   E              R  +    I   T+ + 
Sbjct: 146 TKWVPVPITNPMGYAEAGLSTFSKYTVQEAKRFQLPGMEPWPKRLFDLDQAIVEHTIPVN 205

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
           N        +  + YD+     K+ + F  + +         GDY I+    +     + 
Sbjct: 206 NGKHVRLVNLHLSAYDEGGKIRKQQVEFLKEYMNKHYKN---GDYVIMGGDWNQLVSDVQ 262

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
            +D  F  E  +   +L         +   D   +    D       +N    ID  ++S
Sbjct: 263 LSDPKFVKERPEWLVELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVS 322

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           P     +    +  K   +   SDH PV     +
Sbjct: 323 PN----VEIVNVQGKDLKFEN-SDHNPVSAVFKL 351


>gi|260781208|ref|XP_002585713.1| hypothetical protein BRAFLDRAFT_257725 [Branchiostoma floridae]
 gi|229270746|gb|EEN41724.1| hypothetical protein BRAFLDRAFT_257725 [Branchiostoma floridae]
          Length = 249

 Score = 40.9 bits (94), Expect = 0.18,   Method: Composition-based stats.
 Identities = 39/264 (14%), Positives = 75/264 (28%), Gaps = 24/264 (9%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSY 65
           + T N+ + R +   +   +K    DI+ L ETK   +    +                 
Sbjct: 1   IGTLNIGTYRHKEEEILQIMKRRKLDILGLGETKLRGEIVGKDIGDG--------FTLIS 52

Query: 66  NGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYD 125
            GV     +  + I+      D                  ++               + +
Sbjct: 53  RGVKEGRLHARVAIIVGPRLKDNIQNITITNERIVSVQIKVKDNVYGFTQIYAPQQGRSE 112

Query: 126 DKISWIKRFLRFASQRLELEEPLIFAGDYN--IIPQPHDCYNPIIWENDACFTLEVRQSF 183
           ++       L  A  +L      I  GD+N  +        + +    +     E  +  
Sbjct: 113 EEKDSFYAQLETAISQLPSMTAHIVIGDFNGRVGRNRSGIESTLGPFGEETQNEEGERLI 172

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG-----IRIDHIMLSPEATSLLHS 238
                              H YS        W+KN G       ID+I+ S     +++ 
Sbjct: 173 DFC---LRNSLAIMNGFFRHQYSHTMTRYR-WNKNIGQYDHVSIIDYILSSD--KRIIND 226

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
            ++     G +  SDH  +I  L+
Sbjct: 227 VKVMP---GESLDSDHRLLIADLN 247


>gi|148886652|ref|NP_001092156.1| tyrosyl-DNA phosphodiesterase 2 [Xenopus laevis]
 gi|281312450|sp|A5D8M0|TYDP2_XENLA RecName: Full=Tyrosyl-DNA phosphodiesterase 2; Short=Tyr-DNA
           phosphodiesterase 2; AltName: Full=5'-tyrosyl-DNA
           phosphodiesterase; Short=5'-Tyr-DNA phosphodiesterase;
           AltName: Full=TRAF and TNF receptor-associated protein
           homolog
 gi|146327082|gb|AAI41729.1| LOC100049743 protein [Xenopus laevis]
          Length = 371

 Score = 40.9 bits (94), Expect = 0.18,   Method: Composition-based stats.
 Identities = 37/278 (13%), Positives = 82/278 (29%), Gaps = 45/278 (16%)

Query: 2   SVVTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           S  T  TWN++ +       RAR   + + +    PD++ LQE        P    + L 
Sbjct: 121 SHFTFLTWNIDGLDESNVAERARA--VCSCLALYTPDVVFLQEV------IPP-YCEYLK 171

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
               +    + N     +    ++           V          +    + I    + 
Sbjct: 172 KRAVSYKIITGNEDEYFTAM-MLKKSRVKLISQEIVPYPSTLMMRNLLVANVNISGNSIC 230

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
                  +  D     +K+      + ++           +   +  +        N   
Sbjct: 231 LMTSHLESTKDHSKERLKQLDTVLKKMMDAPPSATVIFGGDTNLRDQEVAKIGGLPNTIL 290

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM------- 227
               V +   K ++  +T   +  ++    Y+              +R D I+       
Sbjct: 291 D---VWEFLGKPEHCRYTWDTKLNNNLRACYT------------SRLRFDRILYRASMEG 335

Query: 228 --LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             + P+  +L+ + ++D        PSDH  ++   DI
Sbjct: 336 SQVIPQFLNLVGTEKLDC----GRFPSDHWGLLCDFDI 369


>gi|239621676|ref|ZP_04664707.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|317482419|ref|ZP_07941436.1| endonuclease/Exonuclease/phosphatase [Bifidobacterium sp.
           12_1_47BFAA]
 gi|239515551|gb|EEQ55418.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis CCUG 52486]
 gi|316916079|gb|EFV37484.1| endonuclease/Exonuclease/phosphatase [Bifidobacterium sp.
           12_1_47BFAA]
          Length = 370

 Score = 40.9 bits (94), Expect = 0.18,   Method: Composition-based stats.
 Identities = 33/258 (12%), Positives = 66/258 (25%), Gaps = 43/258 (16%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTED--KNFPFETLQSLNYHIETCGQ 62
            V T+NV   +A    +   +++   +++ LQET TED  K      ++    + +    
Sbjct: 150 RVMTFNVYKGQADPQAIVELVRDQRVEVLALQET-TEDFVKKLNEAGIEHYLPYAQVSSS 208

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
               G  + S     +                         + + +       G      
Sbjct: 209 DGVFGNGLWSATPLADPTDDDVNSSASFMPGGTVDMGGQQIRFVSVHTTAPVPG------ 262

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                  W +        R   +   IF GD+N         + +               
Sbjct: 263 ---YWRQWKRSLDELGLMREHTDTRYIFMGDFNATYDHTPFRDFL--------------- 304

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
                                 +S+    A +     G  IDH++L           ++ 
Sbjct: 305 ------GDRFVDAARESGHGFTFSWPTNRA-AVPMFAG--IDHVVLDQGM--KAGQCKVV 353

Query: 243 TKPRGWTKPSDHTPVIVS 260
                    SDH  ++ +
Sbjct: 354 KVE-----GSDHAALLAT 366


>gi|294654552|ref|XP_002769996.1| DEHA2A06578p [Debaryomyces hansenii CBS767]
 gi|199428970|emb|CAR65373.1| DEHA2A06578p [Debaryomyces hansenii]
          Length = 523

 Score = 40.9 bits (94), Expect = 0.18,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 37/103 (35%), Gaps = 18/103 (17%)

Query: 4   VTVATWNV---------------NSIR--ARIHNLAAWIKENNPDIICLQETK-TEDKNF 45
           + + ++N+               N+++   R   L +  K  + DI+CLQE    +  ++
Sbjct: 112 IKIMSYNILAQALIRRKLFPTSGNALKWSTRSQVLLSEFKHYDADILCLQELDFIQYNSY 171

Query: 46  PFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDL 88
             + L  L Y ++     + N    ++      I  H      
Sbjct: 172 WRKELGKLGYDMKYYRADTKNHGLAIAFKSDKFICKHQSFMYY 214


>gi|149190193|ref|ZP_01868468.1| hypothetical protein VSAK1_14887 [Vibrio shilonii AK1]
 gi|148835940|gb|EDL52902.1| hypothetical protein VSAK1_14887 [Vibrio shilonii AK1]
          Length = 301

 Score = 40.9 bits (94), Expect = 0.18,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 3/41 (7%)

Query: 223 IDHIMLSPEAT--SLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           IDHI++SPE      + S             SDH P+ + L
Sbjct: 260 IDHIIVSPELRTSPAVQSLMPVEDVLKHQM-SDHCPLSIEL 299


>gi|23466288|ref|NP_696891.1| hypothetical protein BL1743 [Bifidobacterium longum NCC2705]
 gi|23327039|gb|AAN25527.1| hypothetical transmembrane protein with unknown function
           [Bifidobacterium longum NCC2705]
          Length = 370

 Score = 40.9 bits (94), Expect = 0.18,   Method: Composition-based stats.
 Identities = 33/258 (12%), Positives = 66/258 (25%), Gaps = 43/258 (16%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTED--KNFPFETLQSLNYHIETCGQ 62
            V T+NV   +A    +   +++   +++ LQET TED  K      ++    + +    
Sbjct: 150 RVMTFNVYKGQADPQAIVELVRDQRVEVLALQET-TEDFVKKLNEAGIEHYLPYAQVSSS 208

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
               G  + S     +                         + + +       G      
Sbjct: 209 DGVFGNGLWSATPLADPTDDDVNSSASFMPGGTVDMGGQQIRFVSVHTTAPVPG------ 262

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                  W +        R   +   IF GD+N         + +               
Sbjct: 263 ---YWRQWKRSLDELGLMREHTDTRYIFMGDFNATYDHTPFRDFL--------------- 304

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
                                 +S+    A +     G  IDH++L           ++ 
Sbjct: 305 ------GDRFVDAARESGHGFTFSWPTNRA-AVPMFAG--IDHVVLDQGM--KAGQCKVV 353

Query: 243 TKPRGWTKPSDHTPVIVS 260
                    SDH  ++ +
Sbjct: 354 KVE-----GSDHAALLAT 366


>gi|118102264|ref|XP_001232516.1| PREDICTED: hypothetical protein isoform 1 [Gallus gallus]
          Length = 410

 Score = 40.9 bits (94), Expect = 0.18,   Method: Composition-based stats.
 Identities = 33/261 (12%), Positives = 68/261 (26%), Gaps = 30/261 (11%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDK--NFPFETLQSLNYHIETCGQKSYNGVAILSKY 74
           RI  +   + +   D++ LQE  +E    +   +      +          +G+ + SK+
Sbjct: 29  RIRLIGDRLCQEGFDLVLLQEIWSERDYSDLKAKLGGCCPFSHYFRSGVIGSGLCVFSKF 88

Query: 75  QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI-----------GNLYLPHGNPITSTK 123
             ++ + +    +           F   +  L +                   +      
Sbjct: 89  PILDTLLYQYSLNGYPYMLQHGDWFCGKSVGLVVVRIAEITFNIYVTHLHAEYSREKDAY 148

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
              ++       +F     +  + ++  GD N+ P          W        E +   
Sbjct: 149 LPHRVVQAWELAQFICHTAKAADVVLLGGDLNMHPGDVGVRLLRGWTGLHDAFTEAKHFE 208

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
                         T  +                  GIRID+I+     +S         
Sbjct: 209 GCEDGCTLIPNNCFTVKSELQ-----------PFPLGIRIDYILY-KAVSSFTVKCEELR 256

Query: 244 ----KPRGWTKP-SDHTPVIV 259
                  G   P SDH  V+ 
Sbjct: 257 TTTGTVPGMDIPYSDHEAVMA 277


>gi|149248640|ref|XP_001528707.1| hypothetical protein LELG_01227 [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146448661|gb|EDK43049.1| hypothetical protein LELG_01227 [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 390

 Score = 40.9 bits (94), Expect = 0.18,   Method: Composition-based stats.
 Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 2/52 (3%)

Query: 214 SWSKNKGIRIDHIM-LSPEATSLLHSARIDTKPRG-WTKPSDHTPVIVSLDI 263
            +    G  ID+I  +SPE+   +    +D        + SDH PVI S  I
Sbjct: 338 GFGNATGYTIDYIWNMSPESGIKILGHEVDDNLFDQGFRFSDHRPVIASFSI 389


>gi|62858061|ref|NP_001016531.1| CCR4 carbon catabolite repression 4-like [Xenopus (Silurana)
           tropicalis]
 gi|89267365|emb|CAJ82796.1| CCR4 carbon catabolite repression 4-like (S. cerevisiae) [Xenopus
           (Silurana) tropicalis]
 gi|213627135|gb|AAI70786.1| CCR4 carbon catabolite repression 4-like (S. cerevisiae) [Xenopus
           (Silurana) tropicalis]
          Length = 458

 Score = 40.9 bits (94), Expect = 0.18,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 74/265 (27%), Gaps = 22/265 (8%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFE--TLQSLNYHIET--CGQKSYNGVAILS 72
           R + +   I    PD++CLQE    D  F      L  L Y              V   +
Sbjct: 202 RKYLILEEILMYQPDVLCLQEV---DHYFDTFQPILSRLGYQCTFLAKPWSPCLDVEHNN 258

Query: 73  KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIK 132
                 +        L   A+   +  T+ T  + I                   ++ +K
Sbjct: 259 GPDGCALFFLQDRFRLVNSAKIRLSARTLKTNQVAIAETLQCCETGRLLC---FAVTHLK 315

Query: 133 RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192
               +   RL     L+   +               +  +    +  R +   L      
Sbjct: 316 ARTGWERFRLAQGSDLLHNLESITEGATVPLIICGDFNAEPTEEVYKRFASSSLNLNSAY 375

Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA-------RIDTKP 245
             +    ++   Y+ W       S +    +D+I  S  A   ++SA       +I    
Sbjct: 376 KLLSEDGESEPPYTTWKIRPTGESCHT---LDYIWYSQHAL-RVNSALGLPTEEQIGPNR 431

Query: 246 R-GWTKPSDHTPVIVSLDIPEPRKK 269
              +  PSDH  ++      E   +
Sbjct: 432 LPSFNYPSDHLSLVCDFSFNEDPAR 456


>gi|67623175|ref|XP_667870.1| hypothetical protein [Cryptosporidium hominis TU502]
 gi|54659030|gb|EAL37629.1| hypothetical protein Chro.40217 [Cryptosporidium hominis]
          Length = 783

 Score = 40.9 bits (94), Expect = 0.18,   Method: Composition-based stats.
 Identities = 22/79 (27%), Positives = 28/79 (35%), Gaps = 19/79 (24%)

Query: 2   SVVTVATWNV-NSIRARIHNL-------AAW----------IKENNPDIICLQETKTED- 42
           S   V +WNV   I A             +W          I  + PDI+CLQE +TE  
Sbjct: 356 SRFKVFSWNVLAEIYASQEAFPHCDAYMLSWSYRKTRIIVEILSHQPDIVCLQEVQTEHF 415

Query: 43  KNFPFETLQSLNYHIETCG 61
            +F    LQ   Y      
Sbjct: 416 DDFFKPVLQQYGYEGVYKQ 434


>gi|323447130|gb|EGB03078.1| hypothetical protein AURANDRAFT_68316 [Aureococcus anophagefferens]
          Length = 431

 Score = 40.9 bits (94), Expect = 0.19,   Method: Composition-based stats.
 Identities = 7/36 (19%), Positives = 15/36 (41%)

Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
               ++ W  Y +   +N G RID++++        
Sbjct: 150 NGERFTCWHQYHNKRYENVGSRIDYVLVDRALFEAA 185


>gi|315921153|ref|ZP_07917393.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313695028|gb|EFS31863.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 269

 Score = 40.9 bits (94), Expect = 0.19,   Method: Composition-based stats.
 Identities = 35/277 (12%), Positives = 75/277 (27%), Gaps = 50/277 (18%)

Query: 3   VVTVATWNVNS---IRARIHNLAAW---IKENNPDIICLQE----T-KTEDKNFPFETLQ 51
           +V V ++N+ S   + +    + A    IK+ NPD+  LQE    T K E+ +      +
Sbjct: 29  LVKVMSYNIYSGQKVYSGKKGMEAIAQVIKKINPDLAGLQEFETKTNKVENADIIALMKE 88

Query: 52  SLNYHIETCGQKSYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
                     +                  ++     DL       +              
Sbjct: 89  VTGMQYAFFVKTRDVDGGEYGNLILSKYPISDEVNYDLPRIETVEDVYPRSMGVVKTEKE 148

Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170
               +      +   ++ + I +      +   ++ P+I  GD+N +             
Sbjct: 149 GKNFYFGVTHLSHVGNETNRINQTSTILEKTKGMDAPMILTGDFNAL------------A 196

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230
           +     +   +      N  +                               ID ++ +P
Sbjct: 197 DSGPMKILYERFDIGCLNGNYGLTTGTPVPVKA-------------------IDFVLYTP 237

Query: 231 E--ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           +       +    D         SDH PV+ +  I +
Sbjct: 238 DKGMAPKAYDVYYDAYVE-----SDHFPVVATFSIND 269


>gi|290990899|ref|XP_002678073.1| predicted protein [Naegleria gruberi]
 gi|284091684|gb|EFC45329.1| predicted protein [Naegleria gruberi]
          Length = 314

 Score = 40.9 bits (94), Expect = 0.19,   Method: Composition-based stats.
 Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 5/33 (15%)

Query: 6  VATWNVNSIRARIHNLAAWIKENNPDIICLQET 38
          + +W +N    R H L       + DIICLQE 
Sbjct: 21 ILSW-IN----RKHRLLDEFLSYHADIICLQEV 48


>gi|260172870|ref|ZP_05759282.1| Endonuclease/exonuclease/phosphatase [Bacteroides sp. D2]
          Length = 277

 Score = 40.9 bits (94), Expect = 0.19,   Method: Composition-based stats.
 Identities = 35/277 (12%), Positives = 75/277 (27%), Gaps = 50/277 (18%)

Query: 3   VVTVATWNVNS---IRARIHNLAAW---IKENNPDIICLQE----T-KTEDKNFPFETLQ 51
           +V V ++N+ S   + +    + A    IK+ NPD+  LQE    T K E+ +      +
Sbjct: 37  LVKVMSYNIYSGQKVYSGKKGMEAIAQVIKKINPDLAGLQEFETKTNKVENADIIALMKE 96

Query: 52  SLNYHIETCGQKSYNGVAILSK-YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
                     +                  ++     DL       +              
Sbjct: 97  VTGMQYAFFVKTRDVDGGEYGNLILSKYPISDEVNYDLPRIETVEDVYPRSMGVVKTEKE 156

Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170
               +      +   ++ + I +      +   ++ P+I  GD+N +             
Sbjct: 157 GKNFYFGVTHLSHVGNETNRINQTSTILEKTKGMDAPMILTGDFNAL------------A 204

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230
           +     +   +      N  +                               ID ++ +P
Sbjct: 205 DSGPMKILYERFDIGCLNGNYGLTTGTPVPVKA-------------------IDFVLYTP 245

Query: 231 E--ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           +       +    D         SDH PV+ +  I +
Sbjct: 246 DKGMAPKAYDVYYDAYVE-----SDHFPVVATFSIND 277


>gi|303276925|ref|XP_003057756.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226460413|gb|EEH57707.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 600

 Score = 40.9 bits (94), Expect = 0.19,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 6/54 (11%)

Query: 7   ATWNVNSIRARIHNLAAWIKENNPDIICLQETKTED-KNFPFETLQSLNYHIET 59
            +WN      R  N+   I  ++ DI+CLQE +++  ++F    L    Y    
Sbjct: 273 LSWN-----YRRQNILKEIVMHDADILCLQEVQSDHFEDFFQGELGKHGYTSVY 321


>gi|50305037|ref|XP_452476.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49641609|emb|CAH01327.1| KLLA0C06248p [Kluyveromyces lactis]
          Length = 516

 Score = 40.9 bits (94), Expect = 0.19,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 50/188 (26%), Gaps = 3/188 (1%)

Query: 21  LAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYHIETCGQKSYN-GVAILSKYQPIE 78
           L    K  N D++CLQE    + K+F       L Y  +     + N GV I  K    +
Sbjct: 151 LLNEFKYYNVDVLCLQEIDTVQYKSFWKMEFTKLGYMCQFHFNPTKNHGVLIAWKEDLFD 210

Query: 79  IVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFA 138
           +   +  D        IE   T     + +   +               I      L + 
Sbjct: 211 MTDKMLIDYDKETTGAIEPRTTTKNVGMLLSLKFKKKVLEKYPDTKVSGIIIGTTHLFWH 270

Query: 139 SQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT 198
                      +      + +  +  N +  E D   +           +  F     + 
Sbjct: 271 PFGTYERTRQCYI-VLKKVKEFQNRINVLQNEKDGDNSHWPAFFCGDFNSQPFDAPYLSI 329

Query: 199 HDTHHLYS 206
                 Y+
Sbjct: 330 TSKPVEYT 337


>gi|302865833|ref|YP_003834470.1| endonuclease/exonuclease/phosphatase [Micromonospora aurantiaca
           ATCC 27029]
 gi|302568692|gb|ADL44894.1| Endonuclease/exonuclease/phosphatase [Micromonospora aurantiaca
           ATCC 27029]
          Length = 675

 Score = 40.9 bits (94), Expect = 0.19,   Method: Composition-based stats.
 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 9/43 (20%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRG-WTKPSDHTPVIVSLDIP 264
           IDH+ +SP  T+        T+ R   T+ SDH PV +++ +P
Sbjct: 641 IDHVFVSPGLTA--------TEVRAPRTEASDHLPVTLTVTLP 675


>gi|253686638|ref|YP_003015828.1| Endonuclease/exonuclease/phosphatase [Pectobacterium carotovorum
           subsp. carotovorum PC1]
 gi|251753216|gb|ACT11292.1| Endonuclease/exonuclease/phosphatase [Pectobacterium carotovorum
           subsp. carotovorum PC1]
          Length = 381

 Score = 40.9 bits (94), Expect = 0.19,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 28/90 (31%), Gaps = 31/90 (34%)

Query: 200 DTHHLYSFWDYYADSWSKNKGIRI---DHIMLSPEATSLLHSARIDT------------- 243
                Y++  Y+A      KG R+   D+I LS      +    ++              
Sbjct: 296 PEKERYTY--YFAGGK---KGARLNQLDYIFLSAPLHQAVVEWGVERRGIYNIDKIAAKE 350

Query: 244 ---------KPRGWTKP-SDHTPVIVSLDI 263
                    +   W    SDH  + V +DI
Sbjct: 351 GAEPVTPLPEVTSWDTAASDHAALWVEVDI 380


>gi|242047432|ref|XP_002461462.1| hypothetical protein SORBIDRAFT_02g003036 [Sorghum bicolor]
 gi|241924839|gb|EER97983.1| hypothetical protein SORBIDRAFT_02g003036 [Sorghum bicolor]
          Length = 1203

 Score = 40.9 bits (94), Expect = 0.19,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 26/66 (39%), Gaps = 17/66 (25%)

Query: 201  THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP-----SDHT 255
               L+++    ++   +    RIDH   S +         I+  PR   +      SDH 
Sbjct: 1046 HGRLFTW----SNERRRPTLERIDHAFASQD--------WIEAFPRHHLRCLSSDCSDHA 1093

Query: 256  PVIVSL 261
            P+++ L
Sbjct: 1094 PLLLEL 1099


>gi|147835479|emb|CAN72819.1| hypothetical protein VITISV_012036 [Vitis vinifera]
          Length = 818

 Score = 40.9 bits (94), Expect = 0.19,   Method: Composition-based stats.
 Identities = 15/119 (12%), Positives = 39/119 (32%), Gaps = 9/119 (7%)

Query: 143 ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH 202
             EE     G +         +N  +++ +      +  + ++   +     +       
Sbjct: 689 MWEEFGAIRGLWEDPWCLGGDFNITLFQKERSSQRRINSAMRRFAEIVDDLGLVDLPLQG 748

Query: 203 HLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
             +++     +    N+   R+D  ++SP            T+ R     SDH P+++ 
Sbjct: 749 EEFTW-----NGGLNNQAWARLDKFLMSPSWLDQFSGV---TQSRLSRPISDHFPIVLE 799


>gi|66357216|ref|XP_625786.1| hypothetical protein [Cryptosporidium parvum Iowa II]
 gi|46226921|gb|EAK87887.1| hypothetical protein cgd4_1920 [Cryptosporidium parvum Iowa II]
          Length = 782

 Score = 40.9 bits (94), Expect = 0.19,   Method: Composition-based stats.
 Identities = 22/79 (27%), Positives = 28/79 (35%), Gaps = 19/79 (24%)

Query: 2   SVVTVATWNV-NSIRARIHNL-------AAW----------IKENNPDIICLQETKTED- 42
           S   V +WNV   I A             +W          I  + PDI+CLQE +TE  
Sbjct: 356 SRFKVFSWNVLAEIYASQEAFPHCDAYMLSWSYRKTRIIVEILSHQPDIVCLQEVQTEHF 415

Query: 43  KNFPFETLQSLNYHIETCG 61
            +F    LQ   Y      
Sbjct: 416 DDFFKPVLQQYGYEGVYKQ 434


>gi|281349743|gb|EFB25327.1| hypothetical protein PANDA_007759 [Ailuropoda melanoleuca]
          Length = 127

 Score = 40.9 bits (94), Expect = 0.19,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 37/101 (36%), Gaps = 12/101 (11%)

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
           E       L  M  TD  R  H     Y+F+     ++S     RIDH +   +  +   
Sbjct: 22  ETMALNDTLDQMDLTDIFRTLHPETAEYTFFSGAHGTFS-----RIDHTLAHKDRLNKFK 76

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278
             ++          SDH    + L++   +K  +++ +  +
Sbjct: 77  KIKLIPCI-----FSDHN--GMKLEVNHKKKTGKNTNAWRL 110


>gi|327470396|gb|EGF15852.1| RgfB protein [Streptococcus sanguinis SK330]
          Length = 271

 Score = 40.9 bits (94), Expect = 0.19,   Method: Composition-based stats.
 Identities = 28/254 (11%), Positives = 65/254 (25%), Gaps = 29/254 (11%)

Query: 18  IHNLAAWIKENNPDIICLQETK--TEDKNFPFETLQSLNYHIETCGQKSYNGVAILS--- 72
           ++ LA  I +   D+ICLQE    TE +           Y       + +     L    
Sbjct: 21  LNQLAERILQEKYDVICLQEVNQLTESEQVVQAPF----YQAVEGAIEIHQDHFALCLVE 76

Query: 73  ------KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDD 126
                          +  G D+  +   I +   +  + + +  +  P           +
Sbjct: 77  KLAEAGLDYHWSWAYNHIGFDIYNEGVAILSRKPLTPREVLVSEVNDPRDYHTRKVLLAE 136

Query: 127 KISWIK------RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
                +        L +  +  + E   + A    +        +         +   + 
Sbjct: 137 TEVEGQLLTITSCHLSWWDKGFQGEWAKLEAELLKVESPLVLMGDFNNPVGQQGYQTILA 196

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
              +   +                 + WD           ++ID++  S      +  + 
Sbjct: 197 SPLKLQDSHAVAREAIGEATVEGTIAGWD------DNKHALKIDYVFTSKGMD--VERSA 248

Query: 241 IDTKPRGWTKPSDH 254
           +    +     SDH
Sbjct: 249 VVFDGKETPVVSDH 262


>gi|298375120|ref|ZP_06985077.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 3_1_19]
 gi|298267620|gb|EFI09276.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 3_1_19]
          Length = 306

 Score = 40.9 bits (94), Expect = 0.19,   Method: Composition-based stats.
 Identities = 37/300 (12%), Positives = 72/300 (24%), Gaps = 52/300 (17%)

Query: 3   VVTVATWNV-----------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51
            + VAT+N+           N    R   +A  ++ +  DI   QE K            
Sbjct: 22  TMVVATYNLRNANGGDSTNGNGWGQRYPYIAQIVQFHGFDIFGTQEGKYP--QLQDLRQA 79

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL-RIGN 110
              Y     G+         S          +        +   +         L RI  
Sbjct: 80  MPGYDYIGVGRDDGKQAGEHSAIFYRTDKFEVLEHGDFWLSEITDRPNKGWDAVLPRICT 139

Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170
                G           + +         Q       LI         +           
Sbjct: 140 W----GEFRDKQTGFTFLFFNLHMDHVGVQARAESAKLILKKIKEFPKRLPAILTGDFNV 195

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230
           +    + ++      +++       R   +       ++ +      +   RIDH+ L+ 
Sbjct: 196 DQTSESYKLLDGSGIMRDSYEIADFRYAPNGT-----FNGFHPDRKNDS--RIDHLFLTK 248

Query: 231 EATSLLHSARIDTKPRGWT-------------------------KPSDHTPVIVSLDIPE 265
           E    +    I T                                PSDH PV++ +++ +
Sbjct: 249 EFE--VKKYGILTDTYRSEVKESAQKEQNGNFPKEVSLSKYEARTPSDHFPVMIVVEVKD 306


>gi|116669243|ref|YP_830176.1| 5'-nucleotidase domain-containing protein [Arthrobacter sp. FB24]
 gi|116609352|gb|ABK02076.1| 5'-Nucleotidase domain protein [Arthrobacter sp. FB24]
          Length = 1525

 Score = 40.9 bits (94), Expect = 0.19,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 26/73 (35%), Gaps = 21/73 (28%)

Query: 223 IDHIMLSPEATSLLHSARI---------------------DTKPRGWTKPSDHTPVIVSL 261
           +DH++ +P A S++  A I                     +       + SDH PV+V L
Sbjct: 784 LDHVLATPGADSVVTGADIWNINSVESVALEYSRYNSNVTNYYAPDQFRASDHDPVVVGL 843

Query: 262 DIPEPRKKQQDST 274
           D+P          
Sbjct: 844 DLPAVPVLPPSVD 856


>gi|227114004|ref|ZP_03827660.1| endonuclease/exonuclease/phosphatase family protein [Pectobacterium
           carotovorum subsp. brasiliensis PBR1692]
          Length = 381

 Score = 40.9 bits (94), Expect = 0.19,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 28/90 (31%), Gaps = 31/90 (34%)

Query: 200 DTHHLYSFWDYYADSWSKNKGIRI---DHIMLSPEATSLLHSARIDT------------- 243
                Y++  Y++      KG R+   D+I LS      +    ++              
Sbjct: 296 PEKERYTY--YFSGGK---KGARLNQLDYIFLSAPLHQAVVEWGVERRGIYNIDKIAAKE 350

Query: 244 ---------KPRGWTKP-SDHTPVIVSLDI 263
                    +   W    SDH  + V +DI
Sbjct: 351 GAEPVTPLPEVTSWDTAASDHAALWVEVDI 380


>gi|225441072|ref|XP_002264311.1| PREDICTED: hypothetical protein, partial [Vitis vinifera]
          Length = 695

 Score = 40.9 bits (94), Expect = 0.19,   Method: Composition-based stats.
 Identities = 16/167 (9%), Positives = 48/167 (28%), Gaps = 7/167 (4%)

Query: 94  FIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGD 153
            +     +      +G+  +          +    S +    +   +R   EE     G 
Sbjct: 510 VMWDKRVLEGLEFEVGSFSISCRFRNCEEGFVWVFSGLYGPSKGRERRELWEELAAIKGL 569

Query: 154 YNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD 213
           +N        +N + +  +     ++  + ++  +      +         +++      
Sbjct: 570 WNDPWCIAGDFNVVRFPAETSNGRQMSTAMREFSSFIEEFELVDPPLGGGAFTWIGGEGG 629

Query: 214 SWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
           +       R+D  + S +    +  A    +       SDH P+ + 
Sbjct: 630 ALKA----RLDRFLFSGDWEERVTGAM---QCLLTRPVSDHCPIRLD 669


>gi|147833202|emb|CAN64220.1| hypothetical protein VITISV_014001 [Vitis vinifera]
          Length = 1937

 Score = 40.9 bits (94), Expect = 0.19,   Method: Composition-based stats.
 Identities = 34/251 (13%), Positives = 68/251 (27%), Gaps = 32/251 (12%)

Query: 13  SIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAI 70
            I        +   ++   PD++CL ETK +D +                          
Sbjct: 771 GINDCEKRKLIKGVVRNQKPDLVCLLETKVKDVSLQL------------VKSVGVGRFLN 818

Query: 71  LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISW 130
            +          L     +     +E      + ++R  N         +        S 
Sbjct: 819 WASVDARGAARGLLLFWDNRVLEKLEIESGEYSISVRFRNCADGFSWIFSGVYGPVIGSE 878

Query: 131 IKRFLRFASQRLE-LEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNM 189
            + F           E+P    GD+N +  P +  N +    +     EV          
Sbjct: 879 KEDFWEELGAIRGLWEDPWCIRGDFNAVRFPEERRNALRLTTEMRRFTEVIG-------- 930

Query: 190 GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT 249
                +R        +++        +     R+D  ++S        +      PR   
Sbjct: 931 --ELGLRDFPLAGGPFTW----IGGLNSQAASRLDRFLISDPWEDHFSAITQSALPR--- 981

Query: 250 KPSDHTPVIVS 260
             SDH+P+++ 
Sbjct: 982 LVSDHSPIVLE 992


>gi|89891525|ref|ZP_01203030.1| endonuclease/exonuclease/phosphatase family protein [Flavobacteria
           bacterium BBFL7]
 gi|89516299|gb|EAS18961.1| endonuclease/exonuclease/phosphatase family protein [Flavobacteria
           bacterium BBFL7]
          Length = 372

 Score = 40.9 bits (94), Expect = 0.19,   Method: Composition-based stats.
 Identities = 45/280 (16%), Positives = 80/280 (28%), Gaps = 51/280 (18%)

Query: 2   SVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQET--KTEDKNFPFETLQSLNYHI 57
           S + + T NV  ++       L   I+E  PD+I   ET  +  ++    +  +   Y I
Sbjct: 101 STIHIYTANV--LQKNKKGQELYNEIREQQPDLIVFTETNERWSNE-IKNKIGKEYPYKI 157

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
           E     +Y  +           +      ++      +        Q   I         
Sbjct: 158 EQPQDNTYGMLVYSKLRLSDSEIKFKVDPNIPSIESKVMMENGKQFQLYAIHPTPPMP-- 215

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
                         +  +  A    +   P+I  GD+N +           W +    T 
Sbjct: 216 ----QHNPMSTDRDQELILTAMSSYDSNIPVIILGDFNDV----------AWSDSTQLTK 261

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
            + +        GF +   A +                       +DHI++SPE    L 
Sbjct: 262 TIGKLLDLRIGRGFFNTYHAQYPLMR-----------------WPLDHILISPEF--RLK 302

Query: 238 SARIDTKPRGWTKPSDHTPVIVSL----DIPEPRKKQQDS 273
            A       G    SDH P    L    D+   ++  + S
Sbjct: 303 DAG-----TGVDFESDHFPSWAVLTFEPDLASEQRPAEPS 337


>gi|327485101|gb|AEA79508.1| Extracellular deoxyribonuclease Xds [Vibrio cholerae LMA3894-4]
          Length = 869

 Score = 40.9 bits (94), Expect = 0.20,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 24/76 (31%)

Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSA---RI-----------------DTKPRG 247
           W Y   S++   G  +DH+++SP     +  A    I                   K + 
Sbjct: 775 WSY---SFNDEVGA-LDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKD 830

Query: 248 WTKPSDHTPVIVSLDI 263
             + SDH P ++ L+I
Sbjct: 831 QFRASDHDPAVLELNI 846


>gi|262401910|ref|ZP_06078475.1| extracellular nuclease-related protein [Vibrio sp. RC586]
 gi|262351882|gb|EEZ01013.1| extracellular nuclease-related protein [Vibrio sp. RC586]
          Length = 870

 Score = 40.9 bits (94), Expect = 0.20,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 24/76 (31%)

Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSA---RI-----------------DTKPRG 247
           W Y   S++   G  +DH+++SP     +  A    I                   K + 
Sbjct: 773 WSY---SFNDEVGA-LDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKD 828

Query: 248 WTKPSDHTPVIVSLDI 263
             + SDH P ++ L+I
Sbjct: 829 QFRASDHDPAVLELNI 844


>gi|262190835|ref|ZP_06049057.1| extracellular nuclease-related protein [Vibrio cholerae CT 5369-93]
 gi|262033284|gb|EEY51800.1| extracellular nuclease-related protein [Vibrio cholerae CT 5369-93]
          Length = 869

 Score = 40.9 bits (94), Expect = 0.20,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 24/76 (31%)

Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSA---RI-----------------DTKPRG 247
           W Y   S++   G  +DH+++SP     +  A    I                   K + 
Sbjct: 775 WSY---SFNDEVGA-LDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKD 830

Query: 248 WTKPSDHTPVIVSLDI 263
             + SDH P ++ L+I
Sbjct: 831 QFRASDHDPAVLELNI 846


>gi|261211177|ref|ZP_05925466.1| extracellular nuclease-related protein [Vibrio sp. RC341]
 gi|260839678|gb|EEX66289.1| extracellular nuclease-related protein [Vibrio sp. RC341]
          Length = 867

 Score = 40.9 bits (94), Expect = 0.20,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 24/76 (31%)

Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSA---RI-----------------DTKPRG 247
           W Y   S++   G  +DH+++SP     +  A    I                   K + 
Sbjct: 773 WSY---SFNDEVGA-LDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKD 828

Query: 248 WTKPSDHTPVIVSLDI 263
             + SDH P ++ L+I
Sbjct: 829 QFRASDHDPAVLELNI 844


>gi|229521687|ref|ZP_04411105.1| extracellular nuclease-related protein [Vibrio cholerae TM
           11079-80]
 gi|229341281|gb|EEO06285.1| extracellular nuclease-related protein [Vibrio cholerae TM
           11079-80]
          Length = 869

 Score = 40.9 bits (94), Expect = 0.20,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 24/76 (31%)

Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSA---RI-----------------DTKPRG 247
           W Y   S++   G  +DH+++SP     +  A    I                   K + 
Sbjct: 775 WSY---SFNDEVGA-LDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKD 830

Query: 248 WTKPSDHTPVIVSLDI 263
             + SDH P ++ L+I
Sbjct: 831 QFRASDHDPAVLELNI 846


>gi|229524601|ref|ZP_04414006.1| extracellular nuclease-related protein [Vibrio cholerae bv.
           albensis VL426]
 gi|229338182|gb|EEO03199.1| extracellular nuclease-related protein [Vibrio cholerae bv.
           albensis VL426]
          Length = 869

 Score = 40.9 bits (94), Expect = 0.20,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 24/76 (31%)

Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSA---RI-----------------DTKPRG 247
           W Y   S++   G  +DH+++SP     +  A    I                   K + 
Sbjct: 775 WSY---SFNDEVGA-LDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKD 830

Query: 248 WTKPSDHTPVIVSLDI 263
             + SDH P ++ L+I
Sbjct: 831 QFRASDHDPAVLELNI 846


>gi|229527450|ref|ZP_04416842.1| extracellular nuclease-related protein [Vibrio cholerae 12129(1)]
 gi|229335082|gb|EEO00567.1| extracellular nuclease-related protein [Vibrio cholerae 12129(1)]
          Length = 869

 Score = 40.9 bits (94), Expect = 0.20,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 24/76 (31%)

Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSA---RI-----------------DTKPRG 247
           W Y   S++   G  +DH+++SP     +  A    I                   K + 
Sbjct: 775 WSY---SFNDEVGA-LDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKD 830

Query: 248 WTKPSDHTPVIVSLDI 263
             + SDH P ++ L+I
Sbjct: 831 QFRASDHDPAVLELNI 846


>gi|254285815|ref|ZP_04960777.1| hypothetical protein A33_2558 [Vibrio cholerae AM-19226]
 gi|150423997|gb|EDN15936.1| hypothetical protein A33_2558 [Vibrio cholerae AM-19226]
          Length = 869

 Score = 40.9 bits (94), Expect = 0.20,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 24/76 (31%)

Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSA---RI-----------------DTKPRG 247
           W Y   S++   G  +DH+++SP     +  A    I                   K + 
Sbjct: 775 WSY---SFNDEVGA-LDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKD 830

Query: 248 WTKPSDHTPVIVSLDI 263
             + SDH P ++ L+I
Sbjct: 831 QFRASDHDPAVLELNI 846


>gi|153825148|ref|ZP_01977815.1| hypothetical protein A5A_2794 [Vibrio cholerae MZO-2]
 gi|149741294|gb|EDM55336.1| hypothetical protein A5A_2794 [Vibrio cholerae MZO-2]
          Length = 869

 Score = 40.9 bits (94), Expect = 0.20,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 24/76 (31%)

Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSA---RI-----------------DTKPRG 247
           W Y   S++   G  +DH+++SP     +  A    I                   K + 
Sbjct: 775 WSY---SFNDEVGA-LDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKD 830

Query: 248 WTKPSDHTPVIVSLDI 263
             + SDH P ++ L+I
Sbjct: 831 QFRASDHDPAVLELNI 846


>gi|153830066|ref|ZP_01982733.1| hypothetical protein A59_2694 [Vibrio cholerae 623-39]
 gi|148874465|gb|EDL72600.1| hypothetical protein A59_2694 [Vibrio cholerae 623-39]
          Length = 400

 Score = 40.9 bits (94), Expect = 0.20,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 24/76 (31%)

Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSA---RI-----------------DTKPRG 247
           W Y   S++   G  +DH+++SP     +  A    I                   K + 
Sbjct: 306 WSY---SFNDEVGA-LDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKD 361

Query: 248 WTKPSDHTPVIVSLDI 263
             + SDH P ++ L+I
Sbjct: 362 QFRASDHDPAVLELNI 377


>gi|227082737|ref|YP_002811288.1| extracellular nuclease-related protein [Vibrio cholerae M66-2]
 gi|298500556|ref|ZP_07010360.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|227010625|gb|ACP06837.1| extracellular nuclease-related protein [Vibrio cholerae M66-2]
 gi|297540725|gb|EFH76782.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
          Length = 869

 Score = 40.9 bits (94), Expect = 0.20,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 24/76 (31%)

Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSA---RI-----------------DTKPRG 247
           W Y   S++   G  +DH+++SP     +  A    I                   K + 
Sbjct: 775 WSY---SFNDEVGA-LDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKD 830

Query: 248 WTKPSDHTPVIVSLDI 263
             + SDH P ++ L+I
Sbjct: 831 QFRASDHDPAVLELNI 846


>gi|5668810|gb|AAD46036.1|AC007519_21 Contains similarity to gb|M74161 inositol polyphosphate
           5-phosphatase from Homo sapiens and contains a PF|00783
           inositol polyphosphate phosphatase catalytic domain
           [Arabidopsis thaliana]
 gi|48527527|gb|AAT45895.1| phospholipid-specific inositol polyphosphate 5-phosphatase
           [Arabidopsis thaliana]
          Length = 331

 Score = 40.9 bits (94), Expect = 0.20,   Method: Composition-based stats.
 Identities = 37/280 (13%), Positives = 67/280 (23%), Gaps = 30/280 (10%)

Query: 4   VTVATWNVNSIRARIHNLAAWI-KENNPD--IICLQET-KTEDKNF-------PFETLQS 52
           + + TWN+N       +L   + KE   D  ++ LQE  K               E L  
Sbjct: 53  IRIITWNMNG-NVSYEDLVELVGKERKFDLLVVGLQEAPKANVDQLLQTASSPTHELLGK 111

Query: 53  LNYHIE--TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
                          +   +         V    G     +          + + + I  
Sbjct: 112 AKLQSVQLYLFGPKNSHTLVKELKAERYSVGGCGGLIGRKKGAVAIRINYDDIKMVFISC 171

Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170
               H   +                    +     +  ++ GD N   Q    +      
Sbjct: 172 HLSAHAKKVD----QRNTELRHIANSLLPRDKRKRDLTVWLGDLNYRIQDVSNHPVRSLI 227

Query: 171 NDACFT---------LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI 221
            +   +          E  +          T   + T+  +   S  DY      +    
Sbjct: 228 QNHLQSVLVSKDQLLQEAERGEIFKGYSEGTLGFKPTYKYNVGSS--DYDTSHKIRVPAW 285

Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
             D I+   + T  + +             SDH PV   L
Sbjct: 286 -TDRILFKIQDTDNIQATLHSYDSIDQVYGSDHKPVKADL 324


>gi|42562585|ref|NP_175182.2| 5PTASE11 (INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 11); hydrolase/
           phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase/
           phosphatidylinositol-3,5-bisphosphate 5-phosphatase/
           phosphatidylinositol-4,5-bisphosphate 5-phosphatase
           [Arabidopsis thaliana]
 gi|67460994|sp|Q5EAF2|IP5PB_ARATH RecName: Full=Type I inositol-1,4,5-trisphosphate 5-phosphatase 11;
           Short=At5PTase11
 gi|58743294|gb|AAW81725.1| At1g47510 [Arabidopsis thaliana]
 gi|61656149|gb|AAX49377.1| At1g47510 [Arabidopsis thaliana]
 gi|332194058|gb|AEE32179.1| Type I inositol-1,4,5-trisphosphate 5-phosphatase 11 [Arabidopsis
           thaliana]
          Length = 334

 Score = 40.9 bits (94), Expect = 0.20,   Method: Composition-based stats.
 Identities = 37/280 (13%), Positives = 67/280 (23%), Gaps = 30/280 (10%)

Query: 4   VTVATWNVNSIRARIHNLAAWI-KENNPD--IICLQET-KTEDKNF-------PFETLQS 52
           + + TWN+N       +L   + KE   D  ++ LQE  K               E L  
Sbjct: 56  IRIITWNMNG-NVSYEDLVELVGKERKFDLLVVGLQEAPKANVDQLLQTASSPTHELLGK 114

Query: 53  LNYHIE--TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
                          +   +         V    G     +          + + + I  
Sbjct: 115 AKLQSVQLYLFGPKNSHTLVKELKAERYSVGGCGGLIGRKKGAVAIRINYDDIKMVFISC 174

Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170
               H   +                    +     +  ++ GD N   Q    +      
Sbjct: 175 HLSAHAKKVD----QRNTELRHIANSLLPRDKRKRDLTVWLGDLNYRIQDVSNHPVRSLI 230

Query: 171 NDACFT---------LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI 221
            +   +          E  +          T   + T+  +   S  DY      +    
Sbjct: 231 QNHLQSVLVSKDQLLQEAERGEIFKGYSEGTLGFKPTYKYNVGSS--DYDTSHKIRVPAW 288

Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
             D I+   + T  + +             SDH PV   L
Sbjct: 289 -TDRILFKIQDTDNIQATLHSYDSIDQVYGSDHKPVKADL 327


>gi|147674583|ref|YP_001218114.1| hypothetical protein VC0395_A2198 [Vibrio cholerae O395]
 gi|262170130|ref|ZP_06037819.1| extracellular nuclease-related protein [Vibrio cholerae RC27]
 gi|146316466|gb|ABQ21005.1| hypothetical protein VC0395_A2198 [Vibrio cholerae O395]
 gi|227014509|gb|ACP10719.1| extracellular nuclease-related protein [Vibrio cholerae O395]
 gi|262021538|gb|EEY40250.1| extracellular nuclease-related protein [Vibrio cholerae RC27]
          Length = 869

 Score = 40.9 bits (94), Expect = 0.20,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 24/76 (31%)

Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSA---RI-----------------DTKPRG 247
           W Y   S++   G  +DH+++SP     +  A    I                   K + 
Sbjct: 775 WSY---SFNDEVGA-LDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKD 830

Query: 248 WTKPSDHTPVIVSLDI 263
             + SDH P ++ L+I
Sbjct: 831 QFRASDHDPAVLELNI 846


>gi|254226796|ref|ZP_04920369.1| hypothetical protein VCV51_1756 [Vibrio cholerae V51]
 gi|125620689|gb|EAZ49050.1| hypothetical protein VCV51_1756 [Vibrio cholerae V51]
          Length = 869

 Score = 40.9 bits (94), Expect = 0.20,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 24/76 (31%)

Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSA---RI-----------------DTKPRG 247
           W Y   S++   G  +DH+++SP     +  A    I                   K + 
Sbjct: 775 WSY---SFNDEVGA-LDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKD 830

Query: 248 WTKPSDHTPVIVSLDI 263
             + SDH P ++ L+I
Sbjct: 831 QFRASDHDPAVLELNI 846


>gi|121729036|ref|ZP_01682037.1| hypothetical protein VCV52_2576 [Vibrio cholerae V52]
 gi|121628684|gb|EAX61155.1| hypothetical protein VCV52_2576 [Vibrio cholerae V52]
          Length = 869

 Score = 40.9 bits (94), Expect = 0.20,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 24/76 (31%)

Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSA---RI-----------------DTKPRG 247
           W Y   S++   G  +DH+++SP     +  A    I                   K + 
Sbjct: 775 WSY---SFNDEVGA-LDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKD 830

Query: 248 WTKPSDHTPVIVSLDI 263
             + SDH P ++ L+I
Sbjct: 831 QFRASDHDPAVLELNI 846


>gi|15642616|ref|NP_232249.1| extracellular nuclease-related protein [Vibrio cholerae O1 biovar
           El Tor str. N16961]
 gi|121588108|ref|ZP_01677856.1| hypothetical protein VC274080_2619 [Vibrio cholerae 2740-80]
 gi|153819030|ref|ZP_01971697.1| hypothetical protein A5C_2696 [Vibrio cholerae NCTC 8457]
 gi|153821574|ref|ZP_01974241.1| hypothetical protein A5E_2936 [Vibrio cholerae B33]
 gi|229507327|ref|ZP_04396832.1| extracellular nuclease-related protein [Vibrio cholerae BX 330286]
 gi|229509749|ref|ZP_04399230.1| extracellular nuclease-related protein [Vibrio cholerae B33]
 gi|229516874|ref|ZP_04406320.1| extracellular nuclease-related protein [Vibrio cholerae RC9]
 gi|229606833|ref|YP_002877481.1| extracellular nuclease-related protein [Vibrio cholerae MJ-1236]
 gi|254851160|ref|ZP_05240510.1| extracellular nuclease-related protein [Vibrio cholerae MO10]
 gi|255744412|ref|ZP_05418364.1| extracellular nuclease-related protein [Vibrio cholera CIRS 101]
 gi|262158475|ref|ZP_06029590.1| extracellular nuclease-related protein [Vibrio cholerae INDRE 91/1]
 gi|9657210|gb|AAF95762.1| extracellular nuclease-related protein [Vibrio cholerae O1 biovar
           El Tor str. N16961]
 gi|121547651|gb|EAX57748.1| hypothetical protein VC274080_2619 [Vibrio cholerae 2740-80]
 gi|126510411|gb|EAZ73005.1| hypothetical protein A5C_2696 [Vibrio cholerae NCTC 8457]
 gi|126520959|gb|EAZ78182.1| hypothetical protein A5E_2936 [Vibrio cholerae B33]
 gi|229345937|gb|EEO10909.1| extracellular nuclease-related protein [Vibrio cholerae RC9]
 gi|229353223|gb|EEO18162.1| extracellular nuclease-related protein [Vibrio cholerae B33]
 gi|229354832|gb|EEO19753.1| extracellular nuclease-related protein [Vibrio cholerae BX 330286]
 gi|229369488|gb|ACQ59911.1| extracellular nuclease-related protein [Vibrio cholerae MJ-1236]
 gi|254846865|gb|EET25279.1| extracellular nuclease-related protein [Vibrio cholerae MO10]
 gi|255737937|gb|EET93330.1| extracellular nuclease-related protein [Vibrio cholera CIRS 101]
 gi|262029636|gb|EEY48285.1| extracellular nuclease-related protein [Vibrio cholerae INDRE 91/1]
          Length = 869

 Score = 40.9 bits (94), Expect = 0.20,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 24/76 (31%)

Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSA---RI-----------------DTKPRG 247
           W Y   S++   G  +DH+++SP     +  A    I                   K + 
Sbjct: 775 WSY---SFNDEVGA-LDHLLVSPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKD 830

Query: 248 WTKPSDHTPVIVSLDI 263
             + SDH P ++ L+I
Sbjct: 831 QFRASDHDPAVLELNI 846


>gi|298204351|gb|ADI61824.1| endonuclease-reverse transcriptase [Bombyx mori]
          Length = 1061

 Score = 40.9 bits (94), Expect = 0.20,   Method: Composition-based stats.
 Identities = 27/237 (11%), Positives = 56/237 (23%), Gaps = 16/237 (6%)

Query: 21  LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI---ETCGQKSYNGVAILSKYQPI 77
           +A  +   N D+  L ET   D+    E      +          +       +  +   
Sbjct: 27  VARELHRYNVDVAALSETHVADEGELVEVGAGYTFFWKGTAVSETRHSGVGFAIKNHLIK 86

Query: 78  EIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF 137
            +  +       V    +          + +    L   + I    Y +    +      
Sbjct: 87  RLEEYPVHISDRVTTLRLHLDKDNYLNVISVYAPTLDKSDDIKDKFYGEVTLCLDSINAR 146

Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA 197
               L  +       DY   P     +      ++    L +   +              
Sbjct: 147 EQVLLLGDFNARVGRDYEAWPGVLGRHGVGNMNSNGQLLLSLCAQYGLAITNAMFRLAAK 206

Query: 198 THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDH 254
                   ++    +  W       ID+ ++     S +    I    RG    SDH
Sbjct: 207 YKT-----TWMHPRSKHWHL-----IDYAIVRQRDFSQVQ---ITRVMRGAHCWSDH 250


>gi|254504315|ref|ZP_05116466.1| endonuclease/exonuclease/phosphatase family [Labrenzia alexandrii
           DFL-11]
 gi|222440386|gb|EEE47065.1| endonuclease/exonuclease/phosphatase family [Labrenzia alexandrii
           DFL-11]
          Length = 237

 Score = 40.9 bits (94), Expect = 0.20,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 3/41 (7%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +D I+ SPE T  +  A +          SDH PV   L +
Sbjct: 193 LDRIITSPEFT--VQKAGVHKSKTARI-ASDHLPVWAELAL 230



 Score = 39.0 bits (89), Expect = 0.83,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 5/40 (12%)

Query: 3  VVTVATWNVN-SI----RARIHNLAAWIKENNPDIICLQE 37
          ++ + ++N+  SI    R R       I E   D+I LQE
Sbjct: 1  MLKIGSYNIQKSIGVDARRRPDRTLKVIGELQCDVIALQE 40


>gi|297192706|ref|ZP_06910104.1| polynucleotide adenyltransferase [Streptomyces pristinaespiralis
           ATCC 25486]
 gi|297151462|gb|EFH31179.1| polynucleotide adenyltransferase [Streptomyces pristinaespiralis
           ATCC 25486]
          Length = 401

 Score = 40.9 bits (94), Expect = 0.20,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 9/44 (20%)

Query: 4   VTVATWNV-----NSIR----ARIHNLAAWIKENNPDIICLQET 38
           + V TWN      +S R     R   L   ++E + D+I LQE 
Sbjct: 117 LRVLTWNTLWDRYDSDRIATAVRRPLLIDALREADADVIALQEV 160


>gi|206976682|ref|ZP_03237587.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus
           H3081.97]
 gi|217962556|ref|YP_002341128.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus AH187]
 gi|206745168|gb|EDZ56570.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus
           H3081.97]
 gi|217063640|gb|ACJ77890.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus AH187]
          Length = 352

 Score = 40.9 bits (94), Expect = 0.20,   Method: Composition-based stats.
 Identities = 47/274 (17%), Positives = 82/274 (29%), Gaps = 34/274 (12%)

Query: 11  VNSIRARIHNLAAWIKENNPDIICLQET--K------TEDKNFPFETLQSL------NYH 56
           VN     + N+ ++++  N D   LQE   K        +  F  + L         NY 
Sbjct: 91  VN-----LKNMLSFLQNENSDFALLQEVDIKSLRSFDVNEHEFLKKGLPDYVSSFGKNYD 145

Query: 57  IETCGQKSYNGVAI-------LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
            +       N +          SKY   E              R  +    I   T+ + 
Sbjct: 146 TKWVPVPITNPMGYAEAGLSTFSKYTVQEAKRFQLPGMEPWPKRLFDLDRAIVEHTIPVN 205

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
           N        +  + YD+     K+ + F  + +         GDY I+    +     + 
Sbjct: 206 NGKHVRLVNLHLSAYDEGGKIRKQQVEFLKEYMNKHYKN---GDYVIMGGDWNQLVSDVQ 262

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
            +D  F  E  +   +L         +   D   +    D       +N    ID  ++S
Sbjct: 263 LSDPKFVKERPEWLVELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVS 322

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           P     +    +  K   +   SDH PV     +
Sbjct: 323 PN----VEIVNVQGKDLKFEN-SDHNPVSAVFKL 351


>gi|147788645|emb|CAN69756.1| hypothetical protein VITISV_008645 [Vitis vinifera]
          Length = 1196

 Score = 40.9 bits (94), Expect = 0.20,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 23/60 (38%), Gaps = 9/60 (15%)

Query: 201 THHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
               +++     +    N+   R+D  ++SP      +       PR     SDH P+++
Sbjct: 682 QGGEFTW-----NGGQNNQVWARLDRFLVSPSWXDQYNGISQCRLPR---PVSDHFPIML 733


>gi|147772713|emb|CAN76071.1| hypothetical protein VITISV_004551 [Vitis vinifera]
          Length = 1367

 Score = 40.9 bits (94), Expect = 0.20,   Method: Composition-based stats.
 Identities = 10/58 (17%), Positives = 22/58 (37%), Gaps = 7/58 (12%)

Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
             Y++        +     R+D  ++S E  S   +    ++       SDH P+++ 
Sbjct: 681 GSYTWC----GGLNNRSASRLDWFLVSEEWESHFSN---LSQSLLPKPISDHAPILLD 731


>gi|242010076|ref|XP_002425802.1| Type II inositol-1,4,5-trisphosphate 5-phosphatase precursor,
           putative [Pediculus humanus corporis]
 gi|212509735|gb|EEB13064.1| Type II inositol-1,4,5-trisphosphate 5-phosphatase precursor,
           putative [Pediculus humanus corporis]
          Length = 893

 Score = 40.9 bits (94), Expect = 0.20,   Method: Composition-based stats.
 Identities = 20/139 (14%), Positives = 36/139 (25%), Gaps = 10/139 (7%)

Query: 6   VATWNVNSIRARIHNLAAWIKENN------PDI--ICLQETKTEDKNFPFETLQSLNYHI 57
           + TWNVN   A + +L+ W+   N      PDI  +  QE     + F F         +
Sbjct: 234 IGTWNVNGQPAAV-SLSDWLTTTNPEYPDVPDIYAVGFQELDLSKEAFLFNETPREGEWL 292

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR-IGNLYLPHG 116
           E       N  ++      +  +  +                 ++      I       G
Sbjct: 293 EAVSNALQNHKSVTYHKICLVRLVGMMLIVFVQDKHIDHVRNVVSDTVGTGIMGKMGNKG 352

Query: 117 NPITSTKYDDKISWIKRFL 135
                  +           
Sbjct: 353 GIGVRFDFYATSMCFVNSH 371


>gi|288930875|ref|YP_003434935.1| hypothetical protein Ferp_0486 [Ferroglobus placidus DSM 10642]
 gi|288893123|gb|ADC64660.1| hypothetical protein Ferp_0486 [Ferroglobus placidus DSM 10642]
          Length = 1665

 Score = 40.9 bits (94), Expect = 0.20,   Method: Composition-based stats.
 Identities = 12/173 (6%), Positives = 37/173 (21%), Gaps = 10/173 (5%)

Query: 39   KTEDKNFPFETLQS--LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIE 96
            K    +   E ++     YH +     S++    + +    +  + +     +   +   
Sbjct: 1492 KWHQLDITLEDVEGNVKTYHYKVRWVGSWSNPVEVKQSTAGDTTSKVCRYVTENVRKCGY 1551

Query: 97   ATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI 156
             T  +     R  +              +    W   +     +     +     G   +
Sbjct: 1552 KTEEVCRNEFRCWD------EKKCGWHKECSKPWWCFWCSEKCEWKYSCKTERKCGWKPV 1605

Query: 157  IPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWD 209
                                 E  + ++                +   Y+ W 
Sbjct: 1606 CRSERKYKCWYEPVRKYTCWTEPVERYKCWNERKCGWKPVCR--SERKYTCWT 1656


>gi|229199222|ref|ZP_04325900.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus m1293]
 gi|228584239|gb|EEK42379.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus m1293]
          Length = 352

 Score = 40.9 bits (94), Expect = 0.20,   Method: Composition-based stats.
 Identities = 45/274 (16%), Positives = 81/274 (29%), Gaps = 34/274 (12%)

Query: 11  VNSIRARIHNLAAWIKENNPDIICLQET--K------TEDKNFPFETLQSL------NYH 56
           VN     + N+ ++++  N D   LQE   K        +  F  + L         NY 
Sbjct: 91  VN-----LKNMLSFLQNENSDFALLQEVDIKSLRSFDVNEHEFLKKGLPDYVSSFGKNYD 145

Query: 57  IETCGQKSYNGVAI-------LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
            +       N +          SKY                  R  +    I   T+ + 
Sbjct: 146 TKWVPVPITNPMGYAEAGLSTFSKYTVQTAKRFQLPGMEPWPKRLFDLDRAIVEHTIPVN 205

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
           N        +  + YD+     K+ + +  + +         GDY I+    +     + 
Sbjct: 206 NGKHVRLVNLHLSAYDEGGKIRKQQVEYLKEYMNKHYEK---GDYVIMGGDWNQLVSDVQ 262

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
            +D  F  E  +   +L         +   D   +    D       +N    ID  ++S
Sbjct: 263 LSDPKFVKERPEWLVELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVS 322

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           P     +    +  K   +   SDH PV     +
Sbjct: 323 PN----VEIVNVQGKDLKFEN-SDHNPVSAVFKL 351


>gi|156052389|ref|XP_001592121.1| hypothetical protein SS1G_06360 [Sclerotinia sclerotiorum 1980]
 gi|154704140|gb|EDO03879.1| hypothetical protein SS1G_06360 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 311

 Score = 40.9 bits (94), Expect = 0.20,   Method: Composition-based stats.
 Identities = 32/261 (12%), Positives = 69/261 (26%), Gaps = 44/261 (16%)

Query: 32  IICLQET-KTEDKNFPFETLQSLNYHI------------------ETCGQKSYNGVAILS 72
            ICLQE   ++  +      +   Y                           ++ V   +
Sbjct: 73  FICLQEVLHSQLVDIHDVLNEGPGYKWSRLGVGRDDGKQSGEYSPIFYRPAVWDLVLYKT 132

Query: 73  KYQPIEIVTHLPGDDLDVQARFI--EATFTINTQTLRIGNLYLPHGNPITSTKYDDKISW 130
            +          G D               +  + + + + +L +  PI+  K  + I  
Sbjct: 133 YWLSETPDKPSFGWDAGCIRLVTLGIFRHRLTNEIVVVMSTHLDNSGPISRQKSAELILE 192

Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG 190
                + A     L       GD+N  P                       S   + ++ 
Sbjct: 193 KVNHYKNAYAPAALLLA----GDFNSPPDDEAYKTMTS-------------STSTMADIR 235

Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT- 249
                   +     ++ + Y       N   RID I  + +  +      + +       
Sbjct: 236 DLVPEVKRYGNEMTFTSFGY-----VDNTPSRIDFIFSAKDTMAKYGIYAVLSNRYDDEV 290

Query: 250 KPSDHTPVIVSLDIPEPRKKQ 270
             SDH  V+  +++   R ++
Sbjct: 291 YLSDHRAVVADIEVSSTRARE 311


>gi|21232830|ref|NP_638747.1| hypothetical protein XCC3401 [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66767099|ref|YP_241861.1| hypothetical protein XC_0763 [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|188990191|ref|YP_001902201.1| putative nuclease / phosphatase [Xanthomonas campestris pv.
           campestris str. B100]
 gi|21114655|gb|AAM42671.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66572431|gb|AAY47841.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|167731951|emb|CAP50137.1| putative nuclease / phosphatase [Xanthomonas campestris pv.
           campestris]
          Length = 245

 Score = 40.9 bits (94), Expect = 0.20,   Method: Composition-based stats.
 Identities = 15/95 (15%), Positives = 29/95 (30%), Gaps = 14/95 (14%)

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
             +     +      + +        R    +  +++F  +  D         IDHI++S
Sbjct: 160 HPNVMLMGDFNCVADRPEMQALYRHTRLQPPSCVVHTFPSWRPD-------RAIDHILVS 212

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
                      I+         SDH  V + L +P
Sbjct: 213 DSLV-------IEHTEAIPAAFSDHLAVGMDLRVP 240


>gi|321461027|gb|EFX72063.1| hypothetical protein DAPPUDRAFT_111147 [Daphnia pulex]
          Length = 448

 Score = 40.9 bits (94), Expect = 0.20,   Method: Composition-based stats.
 Identities = 41/261 (15%), Positives = 77/261 (29%), Gaps = 43/261 (16%)

Query: 4   VTVATWNVNSI-RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQ 62
           + +  WN   + RA++      ++  NP I+ L ET  +++        + N    +   
Sbjct: 6   IKILQWNARGLFRAKLQEFRENLRSVNPLIVFLSETHWKNEYTIK--FSAYN----SYLL 59

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
              +    ++      I T++           +  +  +N   + + ++Y P+GN     
Sbjct: 60  NRPSQGGGVAILVKKAIQTNILTLPNLPNLEAVGVSVKLNDSFIDLISVYCPNGN----- 114

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                                     I  GD+N     H   +      ++C        
Sbjct: 115 --------QCNDQEINLLFNTPRNKAIIGGDFNS----HSEVSDDFHTTNSCGRKISEFL 162

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
                    T     T      YS                ID    + + + L     I 
Sbjct: 163 LTDPNWTLSTPRNLNTRPNSRDYSSST-------------IDLTFTTSDLSPL---TSIH 206

Query: 243 TKPRGWTKPSDHTPVIVSLDI 263
           T P      SDH PVI+ +D+
Sbjct: 207 TGPYWS---SDHLPVIIDIDL 224


>gi|222106133|ref|YP_002546924.1| hypothetical protein Avi_5005 [Agrobacterium vitis S4]
 gi|221737312|gb|ACM38208.1| conserved hypothetical protein [Agrobacterium vitis S4]
          Length = 245

 Score = 40.9 bits (94), Expect = 0.20,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 25/43 (58%), Gaps = 3/43 (6%)

Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +R+DH+++S      +  AR+   P    + SDH P++V++ I
Sbjct: 206 LRLDHVLISGGL--NILEARVIDTPLAR-RASDHLPLLVTMQI 245



 Score = 40.9 bits (94), Expect = 0.21,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 5/42 (11%)

Query: 2  SVVTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQET 38
          S+  + T+N++S      R     +A  I     DI+CLQE 
Sbjct: 3  SIFRLLTYNIHSCIGTDRRLDPARIAEVIVATEADIVCLQEV 44


>gi|108761648|ref|YP_634768.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus
           xanthus DK 1622]
 gi|108465528|gb|ABF90713.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus
           xanthus DK 1622]
          Length = 287

 Score = 40.9 bits (94), Expect = 0.20,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 18/46 (39%), Gaps = 13/46 (28%)

Query: 221 IRIDHIMLSPEA---TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +RID+++         S +    +          SDH PV+  L +
Sbjct: 234 LRIDYVLACDAFTFVASRVLRVDV----------SDHYPVVADLRL 269



 Score = 39.0 bits (89), Expect = 0.73,   Method: Composition-based stats.
 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 2/36 (5%)

Query: 4  VTVATWNVNSIRAR-IHNLAAWIKENNPDIICLQET 38
          + V T+N+ S  AR +  +A  I+   PD++ LQE 
Sbjct: 41 LRVMTFNIQSG-ARGLERVAHVIRAAVPDVVALQEV 75


>gi|20803864|emb|CAD31442.1| HYPOTHETICAL PROTEIN [Mesorhizobium loti R7A]
          Length = 66

 Score = 40.9 bits (94), Expect = 0.21,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 3/39 (7%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKP---SDHTPVI 258
           IDH+ +SP      H   I    R   +    SDH PV+
Sbjct: 18  IDHVFISPNLVPGGHDFMILALDRTIERFLEVSDHRPVL 56


>gi|304383804|ref|ZP_07366262.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           marshii DSM 16973]
 gi|304335060|gb|EFM01332.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           marshii DSM 16973]
          Length = 325

 Score = 40.9 bits (94), Expect = 0.21,   Method: Composition-based stats.
 Identities = 30/262 (11%), Positives = 58/262 (22%), Gaps = 40/262 (15%)

Query: 30  PDIICLQET---KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGD 86
           PD++ L E               L++  Y+          G+ +   Y P          
Sbjct: 80  PDVVALCEVENDTVMTDLTKKSLLRAAGYNYVMTHSADRRGMDVALLYSPATFAPIRDCT 139

Query: 87  DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEE 146
                   +  T  I    L +               +       +   R    ++    
Sbjct: 140 FRVPPPEGMRPTRDI----LYVAGRLPAGDTLHIIVVHAPSRMGGEPQTRPYRCKVAQCI 195

Query: 147 PLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYS 206
             +        P+          +       E  +S         ++           Y 
Sbjct: 196 VAVTDSIRRQSPEAKILIAGDFNDYS---DNEAVRSIVAKGMADVSEHATGKQGAGGTYR 252

Query: 207 FWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKP--------------------- 245
           +   +           +DH+  SP     +    I+  P                     
Sbjct: 253 YQGQWGS---------LDHLFASPSLLPFIQECYINDAPFLTEDDPTYGGRMPHRSFRGT 303

Query: 246 RGWTKPSDHTPVIVSLDIPEPR 267
           R     SDH P++V L   +  
Sbjct: 304 RYVGGISDHLPLVVHLRWEKSE 325


>gi|321452193|gb|EFX63643.1| hypothetical protein DAPPUDRAFT_335237 [Daphnia pulex]
          Length = 206

 Score = 40.9 bits (94), Expect = 0.21,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 2/37 (5%)

Query: 4  VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQET 38
          + VA+ N+  I    R+  L  +   N  D+ICLQE 
Sbjct: 1  MKVASINIARISTPERLQLLLNYCVSNEFDVICLQEV 37


>gi|321452110|gb|EFX63579.1| hypothetical protein DAPPUDRAFT_335317 [Daphnia pulex]
          Length = 206

 Score = 40.9 bits (94), Expect = 0.21,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 2/37 (5%)

Query: 4  VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQET 38
          + VA+ N+  I    R+  L  +   N  D+ICLQE 
Sbjct: 1  MKVASINIARISTPERLQLLLNYCVSNEFDVICLQEV 37


>gi|321450763|gb|EFX62654.1| hypothetical protein DAPPUDRAFT_120011 [Daphnia pulex]
          Length = 271

 Score = 40.9 bits (94), Expect = 0.21,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 2/37 (5%)

Query: 4  VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQET 38
          + VA+ N+  I    R+  L  +   N  D+ICLQE 
Sbjct: 1  MKVASINIARISTPERLQLLLNYCVSNEFDVICLQEV 37


>gi|298204343|gb|ADI61820.1| endonuclease-reverse transcriptase [Bombyx mori]
          Length = 1013

 Score = 40.9 bits (94), Expect = 0.21,   Method: Composition-based stats.
 Identities = 44/282 (15%), Positives = 81/282 (28%), Gaps = 24/282 (8%)

Query: 5   TVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKT-EDKNFPFETLQSLNYHIETCG 61
            + TWNV  +    ++H L   I     ++  L ET    + +F  +             
Sbjct: 58  KIGTWNVRGLMQPGKLHILEKEITRCELNVCGLSETHWKSNGHFLTDAHAIY---FSGNN 114

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
            KS NGVAI+      + V         V  R +          L I  +Y P  +    
Sbjct: 115 TKSSNGVAIVIPKGINDCVMGYE----SVSDRVLSIRIKAAPINLDIIQVYAPTSSSSDK 170

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
              D          +  ++ L +                                 E   
Sbjct: 171 DLEDFYCDLENTMSKIPNRELLI-VMGDLNSKIGANANQLSQTAGKFGLGQRNERGERLL 229

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
            F    N+   ++    H    LY++         +N+   ID+IM+S    + + +   
Sbjct: 230 EFAADHNLVICNSFFQNHPR-RLYTWISSTGH---RNQ---IDYIMISSRWKTSVRNTHT 282

Query: 242 DTKPRGWTKPSDHTPVIVSLDI---PEPRKKQQDSTSQNMKP 280
                     SDH  ++ ++ +      +  +Q        P
Sbjct: 283 LPSA---DCSSDHELLVATIQLKLKAARKVDKQRRIQPTDLP 321


>gi|241958790|ref|XP_002422114.1| inositol phosphosphingolipids phospholipase C, putative;
           phospholipase C, putative [Candida dubliniensis CD36]
 gi|223645459|emb|CAX40116.1| inositol phosphosphingolipids phospholipase C, putative [Candida
           dubliniensis CD36]
          Length = 438

 Score = 40.9 bits (94), Expect = 0.21,   Method: Composition-based stats.
 Identities = 37/302 (12%), Positives = 82/302 (27%), Gaps = 38/302 (12%)

Query: 4   VTVATWNVNSIR-------ARIHNLAAWIK-----ENNPDIICLQETKTEDKNFPFETLQ 51
           + + T+N   ++        R+  +A  +      + + DI+ LQE   E+     + + 
Sbjct: 20  IKLLTFNTWGLKFISKHRKERLRAIADALANPKSPDEDYDIVALQEIWCEEDWQYLDLVC 79

Query: 52  SLNY---HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108
              Y    +   G  S  G+A+LSK    E   +    +    A F    +   +  + +
Sbjct: 80  RPRYPYRRVFKAGIVSGPGLAVLSKISIAETFLYRFPINGRPSAFFRGDFYVGKSIAVTM 139

Query: 109 GN--------------LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDY 154
                                     ++    +      F +      +    +I  GD 
Sbjct: 140 FQPHHPDILPIALLNSHMHAPYGSGDASYSTHRACQAWDFAKLVRMLKKAGYAVIQVGDL 199

Query: 155 NIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADS 214
           N  P         +          +        +   T ++        + +        
Sbjct: 200 NSKPDSLPYKLFTVEGGLTDSWNVLNADNVVPNDQIATLSLEDQISLAGV-TCNSRLNTW 258

Query: 215 WSKNKGI---RIDHIMLSPE----ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPR 267
                     R+D+ ++         + +        P   +  SDH    V L I    
Sbjct: 259 RESRPLWEACRLDYALIDASNITPVAAQVKFVDKLPPPLSCSY-SDHFAYSVDLVIRPKE 317

Query: 268 KK 269
           ++
Sbjct: 318 ER 319


>gi|150009697|ref|YP_001304440.1| hypothetical protein BDI_3112 [Parabacteroides distasonis ATCC
           8503]
 gi|255013008|ref|ZP_05285134.1| hypothetical protein B2_03828 [Bacteroides sp. 2_1_7]
 gi|298374104|ref|ZP_06984062.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 3_1_19]
 gi|149938121|gb|ABR44818.1| conserved hypothetical protein with
           endonuclease/exonuclease/phosphatase family domain
           [Parabacteroides distasonis ATCC 8503]
 gi|298268472|gb|EFI10127.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 3_1_19]
          Length = 280

 Score = 40.9 bits (94), Expect = 0.21,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 18/39 (46%), Gaps = 2/39 (5%)

Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
           RID+I ++      ++      + +     SDH P+++ 
Sbjct: 241 RIDYIFVTKGI--QVNKYGTLNECQYGHFSSDHFPIMIE 277


>gi|284989389|ref|YP_003407943.1| endonuclease/exonuclease/phosphatase [Geodermatophilus obscurus
          DSM 43160]
 gi|284062634|gb|ADB73572.1| Endonuclease/exonuclease/phosphatase [Geodermatophilus obscurus
          DSM 43160]
          Length = 257

 Score = 40.9 bits (94), Expect = 0.21,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 22/41 (53%), Gaps = 6/41 (14%)

Query: 4  VTVATWNV-NSI-----RARIHNLAAWIKENNPDIICLQET 38
          + +AT+N+ +       R  +  LA  +K+ + D++ LQE 
Sbjct: 1  MRIATFNILHGRSPVDDRVDVERLATAVKDLDADVLGLQEV 41


>gi|114704450|ref|ZP_01437358.1| putative Endonuclease/Exonuclease/phosphatase family protein
          [Fulvimarina pelagi HTCC2506]
 gi|114539235|gb|EAU42355.1| putative Endonuclease/Exonuclease/phosphatase family protein
          [Fulvimarina pelagi HTCC2506]
          Length = 248

 Score = 40.9 bits (94), Expect = 0.21,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 7/42 (16%)

Query: 3  VVTVATWNVNSI--RARIHN----LAAWIKENNPDIICLQET 38
           + + +WN++    R R  N    +A  I+   PDI+ LQE 
Sbjct: 11 TLRIVSWNIHGAIGRRRRPNPERTIAE-IERMAPDILILQEV 51


>gi|72390874|ref|XP_845731.1| RNA-editing complex protein MP100 [Trypanosoma brucei TREU927]
 gi|62175829|gb|AAX69956.1| RNA-editing complex protein MP100 [Trypanosoma brucei]
 gi|70802267|gb|AAZ12172.1| RNA-editing complex protein MP100 [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 894

 Score = 40.9 bits (94), Expect = 0.21,   Method: Composition-based stats.
 Identities = 32/288 (11%), Positives = 74/288 (25%), Gaps = 32/288 (11%)

Query: 2   SVVTVATWNV-------------------NSIRARIHNLAAWIKENNPDIICLQETKTED 42
           + + + TWNV                    S + R   +A  I+E + D++ +QE   E 
Sbjct: 616 ASLKLLTWNVMFDRYSGKPTPLGMPGIDWCSPK-RYPVIAKIIEEEDADVVGMQEV--EP 672

Query: 43  KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN 102
             + F + + L            +          +     LP   ++             
Sbjct: 673 VFWEFLSKRPLIRQRYYFSCGHMSPAIAPWGVLMLIHRRRLPVQSINYLNVPAWTNHVSL 732

Query: 103 TQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD 162
              + +  ++                S         +         +  GD   +   +D
Sbjct: 733 MPVVGLKMVHGTVHIAAAHLLAPYTKSHENARTSQDTALRHHMTKTLGGGDVVTMGDFND 792

Query: 163 CYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR 222
                         ++              D             F+      + +++  R
Sbjct: 793 WPTNEFIMPHESQYVDCWPVLHPNNPGKTMDETNTFCKLKVEEMFFGRSDKVFLRSR--R 850

Query: 223 I----DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEP 266
           +     H++ +       ++A        +  PSDH  V ++  +  P
Sbjct: 851 LVPVEAHLVGTRSVNDENNNA----DAPAYLFPSDHYGVSITFSLKLP 894


>gi|307178840|gb|EFN67403.1| Protein angel-like protein 2 [Camponotus floridanus]
          Length = 480

 Score = 40.9 bits (94), Expect = 0.22,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 29/79 (36%), Gaps = 24/79 (30%)

Query: 3   VVTVATWNV----------------N----SIRARIHNLAAWIKENNPDIICLQETKTED 42
           ++ + ++N+                N    S + R   L   I+E + +IICLQE   ++
Sbjct: 87  ILRLLSFNILAQNLLEDHSYLYQDHNKKALSWKIRKPLLIQEIREADANIICLQE--MQE 144

Query: 43  KNFPFET--LQSLNYHIET 59
            +        + L Y    
Sbjct: 145 DHLLDFVIPFKQLGYEYLY 163


>gi|242065810|ref|XP_002454194.1| hypothetical protein SORBIDRAFT_04g026455 [Sorghum bicolor]
 gi|241934025|gb|EES07170.1| hypothetical protein SORBIDRAFT_04g026455 [Sorghum bicolor]
          Length = 1026

 Score = 40.9 bits (94), Expect = 0.22,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 1  MSVVTVATWNVNSIRARIHNLA--AWIKENNPDIICLQETKTE 41
          MS      WNV  + +R   +     +      ++CLQETK +
Sbjct: 4  MSDNKFLFWNVRGLNSRASRVCVRDVVILEAVSVVCLQETKVQ 46


>gi|45185974|ref|NP_983690.1| ACR288Wp [Ashbya gossypii ATCC 10895]
 gi|74694735|sp|Q75BI3|CCR4_ASHGO RecName: Full=Glucose-repressible alcohol dehydrogenase
           transcriptional effector; AltName: Full=Carbon
           catabolite repressor protein 4; AltName:
           Full=Cytoplasmic deadenylase
 gi|44981764|gb|AAS51514.1| ACR288Wp [Ashbya gossypii ATCC 10895]
          Length = 736

 Score = 40.9 bits (94), Expect = 0.22,   Method: Composition-based stats.
 Identities = 33/292 (11%), Positives = 62/292 (21%), Gaps = 47/292 (16%)

Query: 17  RIHNLAAWIKENNPDIICLQET--KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKY 74
           R   L   +     DIICLQE   KT ++ F    L+   Y      +     +      
Sbjct: 429 RREKLKDEVLAYQTDIICLQEVESKTYEE-FWLPILEKQGYSGIFHAKTRARTMQSKDAK 487

Query: 75  QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYD-----DKIS 129
           +           +     +      ++  +  +           +               
Sbjct: 488 KVDGCCIFYKNSEFTAVFKDAIDFSSVWMKHKKFQRTEDYLNRAMNKDNVALIIKLRHER 547

Query: 130 WIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL--Q 187
             +      +                 +   +                + +         
Sbjct: 548 TGEHVWVVTTHLHWDPHFNDVKTFQVAVMLDYIEKLLKQHGGVGSPQDKKKIPLVICGDF 607

Query: 188 NMGFTDAIRATHDTHHLYSFWDYYADSW----SKN--KGIR------------------- 222
           N     A+    +T  + S  D     +     KN   G+                    
Sbjct: 608 NSQLDSAVVELFNTGSVRSHKDIEGRDFGYMSQKNFAHGLALKSSYGSIGELPFTNLSPT 667

Query: 223 ----IDHIMLS-PEATSLLHSARIDTKPRGW-------TKPSDHTPVIVSLD 262
               ID+I  S            ID               PSDH P++   +
Sbjct: 668 FTDVIDYIWYSTQALRVRGLLGEIDPAYAAKFIGLPNDKIPSDHIPLLARFE 719


>gi|323335993|gb|EGA77269.1| Ngl2p [Saccharomyces cerevisiae Vin13]
          Length = 482

 Score = 40.9 bits (94), Expect = 0.22,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 49/192 (25%), Gaps = 3/192 (1%)

Query: 17  RIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNY--HIETCGQKSYNGVAILSK 73
           R   L    K  N D+ICLQE    + ++F  +    L Y         K++    +  +
Sbjct: 109 RSKVLLNEFKYYNXDVICLQEIDHIQFQSFWKDEFSKLGYDGQYYRNATKNHGVAIMWRR 168

Query: 74  YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKR 133
               ++   L   D +        T T N   +          + +           I  
Sbjct: 169 ELFHQVDKMLIDYDKESSESISTRTTTNNVGLVLALKFSEKVLSNLGKKSSKKCGILIGT 228

Query: 134 FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTD 193
              F       E           + +     N +  END   +           +  F  
Sbjct: 229 THLFWHPFGTYERTRQCYIVLKKMKEFMHRVNVLQNENDGDLSHWFPFFCGDFNSQPFDT 288

Query: 194 AIRATHDTHHLY 205
              +       Y
Sbjct: 289 PYLSMTSKPVHY 300


>gi|229072559|ref|ZP_04205761.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus F65185]
 gi|229082318|ref|ZP_04214781.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock4-2]
 gi|228700750|gb|EEL53273.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock4-2]
 gi|228710535|gb|EEL62508.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus F65185]
          Length = 352

 Score = 40.9 bits (94), Expect = 0.22,   Method: Composition-based stats.
 Identities = 43/267 (16%), Positives = 78/267 (29%), Gaps = 29/267 (10%)

Query: 18  IHNLAAWIKENNPDIICLQET--K------TEDKNFPFETLQSL------NYHIETCGQK 63
           + N+ ++++  N D   LQE   K        +  F  + L         NY  +     
Sbjct: 93  LKNMLSFLQNENSDFALLQEVDIKSLRSFDVNEHEFLKKGLPDYVSSFGKNYDTKWVPVP 152

Query: 64  SYNGVAI-------LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
             N +          SKY   E              R  +    I    + + N      
Sbjct: 153 ITNPMGYAEAGLSTFSKYTVQEAKRFQLPGMEPWPKRLFDLDRAIVEYKIPVNNGKHVRL 212

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
             +  + YD+     K+ + +  + +         GDY I+    +        +D  F 
Sbjct: 213 VNLHLSAYDEGGKIRKQQVEYLKEYMNKHYEN---GDYVIMGGDWNQLVSNAQLSDPKFV 269

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
            E  +   +L         +   D   +    D       +N    ID  ++SP     +
Sbjct: 270 KERPEWLVELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN----V 325

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263
               +  K   +   SDH PV     +
Sbjct: 326 EIVNVQGKDLKFEN-SDHNPVSAVFKL 351


>gi|229147624|ref|ZP_04275968.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST24]
 gi|296505509|ref|YP_003667209.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           thuringiensis BMB171]
 gi|228635833|gb|EEK92319.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST24]
 gi|296326561|gb|ADH09489.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           thuringiensis BMB171]
          Length = 352

 Score = 40.9 bits (94), Expect = 0.22,   Method: Composition-based stats.
 Identities = 43/267 (16%), Positives = 78/267 (29%), Gaps = 29/267 (10%)

Query: 18  IHNLAAWIKENNPDIICLQET--K------TEDKNFPFETLQSL------NYHIETCGQK 63
           + N+ ++++  N D   LQE   K        +  F  + L         NY  +     
Sbjct: 93  LKNMLSFLQNENSDFALLQEVDIKSLRSFDVNEHEFLKKGLPDYVSSFGKNYDTKWVPVP 152

Query: 64  SYNGVAI-------LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
             N +          SKY   E              R  +    I    + + N      
Sbjct: 153 ITNPMGYAEAGLSTFSKYTVQEAKRFQLPGMEPWPKRLFDLDRAIVEYKIPVNNGKHVRL 212

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
             +  + YD+     K+ + +  + +         GDY I+    +        +D  F 
Sbjct: 213 VNLHLSAYDEGGKIRKQQVEYLKEYMNKHYEN---GDYVIMGGDWNQLVSNAQLSDPKFV 269

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
            E  +   +L         +   D   +    D       +N    ID  ++SP     +
Sbjct: 270 KERPEWLVELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN----V 325

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263
               +  K   +   SDH PV     +
Sbjct: 326 EIVNVQGKDLKFEN-SDHNPVSAVFKL 351


>gi|206970057|ref|ZP_03231010.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus
           AH1134]
 gi|218234375|ref|YP_002369878.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus B4264]
 gi|228955337|ref|ZP_04117345.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|229153262|ref|ZP_04281440.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus m1550]
 gi|229181366|ref|ZP_04308695.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus 172560W]
 gi|206734634|gb|EDZ51803.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus
           AH1134]
 gi|218162332|gb|ACK62324.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus B4264]
 gi|228602102|gb|EEK59594.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus 172560W]
 gi|228629866|gb|EEK86517.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus m1550]
 gi|228804470|gb|EEM51081.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
          Length = 352

 Score = 40.9 bits (94), Expect = 0.22,   Method: Composition-based stats.
 Identities = 43/267 (16%), Positives = 78/267 (29%), Gaps = 29/267 (10%)

Query: 18  IHNLAAWIKENNPDIICLQET--K------TEDKNFPFETLQSL------NYHIETCGQK 63
           + N+ ++++  N D   LQE   K        +  F  + L         NY  +     
Sbjct: 93  LKNMLSFLQNENSDFALLQEVDIKSLRSFDVNEHEFLKKGLPDYVSSFGKNYDTKWVPVP 152

Query: 64  SYNGVAI-------LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
             N +          SKY   E              R  +    I    + + N      
Sbjct: 153 ITNPMGYAEAGLSTFSKYTVQEAKRFQLPGMEPWPKRLFDLDRAIVEYKIPVNNGKHVRL 212

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
             +  + YD+     K+ + +  + +         GDY I+    +        +D  F 
Sbjct: 213 VNLHLSAYDEGGKIRKQQVEYLKEYMNKHYEN---GDYVIMGGDWNQLVSNAQLSDPKFV 269

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
            E  +   +L         +   D   +    D       +N    ID  ++SP     +
Sbjct: 270 KERPEWLVELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN----V 325

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263
               +  K   +   SDH PV     +
Sbjct: 326 EIVNVQGKDLKFEN-SDHNPVSAVFKL 351


>gi|157960646|ref|YP_001500680.1| endonuclease/exonuclease/phosphatase [Shewanella pealeana ATCC
           700345]
 gi|157845646|gb|ABV86145.1| Endonuclease/exonuclease/phosphatase [Shewanella pealeana ATCC
           700345]
          Length = 379

 Score = 40.9 bits (94), Expect = 0.22,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 21/54 (38%), Gaps = 13/54 (24%)

Query: 223 IDHIMLSPEATSLLHS-----ARIDTKPRGWTKPS--------DHTPVIVSLDI 263
           +D+I+LS +      +         T+ R    PS        DH PV  +L I
Sbjct: 324 LDYILLSADFDPSFDNSVAEVCDYHTEDRHLVNPSFERDSQSSDHAPVTCTLRI 377


>gi|229513544|ref|ZP_04403008.1| extracellular nuclease-related protein [Vibrio cholerae TMA 21]
 gi|229349421|gb|EEO14377.1| extracellular nuclease-related protein [Vibrio cholerae TMA 21]
          Length = 869

 Score = 40.9 bits (94), Expect = 0.22,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 30/76 (39%), Gaps = 24/76 (31%)

Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR---I-----------------DTKPRG 247
           W Y   S++   G  +DH+++SP   + +  A    I                   K + 
Sbjct: 775 WSY---SFNDEVGA-LDHLLVSPSLKTKVVDASDWHINGAESTLFDYNDEFKGNLPKYKD 830

Query: 248 WTKPSDHTPVIVSLDI 263
             + SDH P ++ L+I
Sbjct: 831 QFRASDHDPAVLELNI 846


>gi|260950683|ref|XP_002619638.1| hypothetical protein CLUG_00797 [Clavispora lusitaniae ATCC 42720]
 gi|238847210|gb|EEQ36674.1| hypothetical protein CLUG_00797 [Clavispora lusitaniae ATCC 42720]
          Length = 476

 Score = 40.9 bits (94), Expect = 0.23,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 36/105 (34%), Gaps = 22/105 (20%)

Query: 4   VTVATWNV-------------NSIRARIH------NLAAWIKENNPDIICLQET-KTEDK 43
           +++ ++NV             N   A +        L +  K  + DI+CLQE    +  
Sbjct: 76  ISIMSYNVLAQALIRRSLFPTNG--AALKWGTRSQVLLSEFKHYDCDILCLQELDYIQYN 133

Query: 44  NFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDL 88
           +F  + L  L Y+ +     + N    +   Q      H    + 
Sbjct: 134 SFWKQKLSKLGYNSQYYRSGTKNHGVAIFYKQEKFAFKHSMFINY 178


>gi|77555695|gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1621

 Score = 40.9 bits (94), Expect = 0.23,   Method: Composition-based stats.
 Identities = 18/134 (13%), Positives = 41/134 (30%), Gaps = 9/134 (6%)

Query: 134 FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW-----ENDACFTLEVRQSFQKLQN 188
            L   +                  P                       ++ + +  + ++
Sbjct: 350 CLYGDAHSETKHRTWTTMRGLIDNPTTPWLMAGDFNEILFSHEKQGGRMKAQSAMDEFRH 409

Query: 189 MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGW 248
                 +         ++ W  ++ S       R+D  + +PE  ++  +AR+     G 
Sbjct: 410 ALTDCGLDDLGFEGDAFT-WRNHSHSQEGYIRERLDRAVANPEWRAMFPAARVIN---GD 465

Query: 249 TKPSDHTPVIVSLD 262
            + SDH PVI+ L+
Sbjct: 466 PRHSDHRPVIIELE 479


>gi|225711984|gb|ACO11838.1| TRAF and TNF receptor-associated protein [Lepeophtheirus salmonis]
          Length = 346

 Score = 40.5 bits (93), Expect = 0.23,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 5/38 (13%)

Query: 6   VATWNVNSI-RA----RIHNLAAWIKENNPDIICLQET 38
           + TWNV+ + RA    R+  +   I++    I+ LQE 
Sbjct: 95  LVTWNVDGLSRANLKVRVKAVCKIIEDTKVGIVFLQEV 132


>gi|228961316|ref|ZP_04122933.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|228798369|gb|EEM45365.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar pakistani str. T13001]
          Length = 352

 Score = 40.5 bits (93), Expect = 0.23,   Method: Composition-based stats.
 Identities = 44/267 (16%), Positives = 79/267 (29%), Gaps = 29/267 (10%)

Query: 18  IHNLAAWIKENNPDIICLQET--KT------EDKNFPFETLQSL------NYHIETCGQK 63
           + N+ A+++  N D   LQE   K+       +  F  + L         NY  +     
Sbjct: 93  LKNMLAFLQNENSDFALLQEVDIKSLRSFDINEHEFLKKGLPDYVSSFGKNYDTKWVPVP 152

Query: 64  SYNGVAI-------LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
             N +          SKY   E              R  +    I    + + N      
Sbjct: 153 ITNPMGYAEAGLSTFSKYTVQEAKRFQLPGMEPWPKRLFDLDRAIVEYKIPVNNGKHVRL 212

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
             +  + YD+     K+ + +  + +         GDY I+    +        +D  F 
Sbjct: 213 VNLHLSAYDEGGKIRKQQVEYLKEYMNKHYEN---GDYVIMGGDWNQLVSNAQLSDPKFV 269

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
            E  +   +L         +   D   +    D       +N    ID  ++SP     +
Sbjct: 270 KERPEWLVELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN----V 325

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263
               +  K   +   SDH PV     +
Sbjct: 326 EIVNVQGKDLKFEN-SDHNPVSAVFKL 351


>gi|148271891|ref|YP_001221452.1| hypothetical protein CMM_0712 [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|147829821|emb|CAN00742.1| conserved hypothetical protein [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
          Length = 276

 Score = 40.5 bits (93), Expect = 0.23,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 67/246 (27%), Gaps = 22/246 (8%)

Query: 17  RIHNLAAWIKENNPDIICLQE-----TKTEDKNFPFETLQSLNYHIETCGQKSYNGVAIL 71
           R   L  ++++  P ++ +QE      +T +K  P    + +    E      +  +   
Sbjct: 41  RQEVLTRFLQQERPTVLGVQEALWPQIQTIEKALPPS-YRMIGQGREGGSHGEHGAIFY- 98

Query: 72  SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWI 131
            +   + ++ H      D        T+      +     +            D  +   
Sbjct: 99  -QASRLTLLEHDVMWLSDTPDVIGSMTWGNPMPRILTWARFQDEATGHPLVVLDTHLDHD 157

Query: 132 KRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191
               R  +     E          ++           +  DA       +          
Sbjct: 158 VAEARDRAAEAIAELVRTRFAGLPLVLIGDFNAPVDSFPYDALTRRAGLRDSWLDTARQA 217

Query: 192 TDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP 251
           T A           +F DY         G RID I++S      + +A ++         
Sbjct: 218 TPAFG---------TFPDYRPPVVD---GPRIDWILVSDRVD--VRAAAVNDFAWRGRMM 263

Query: 252 SDHTPV 257
           SDH PV
Sbjct: 264 SDHLPV 269


>gi|190345986|gb|EDK37968.2| hypothetical protein PGUG_02066 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 444

 Score = 40.5 bits (93), Expect = 0.23,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 31/76 (40%), Gaps = 22/76 (28%)

Query: 4   VTVATWNV---------------NSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFP 46
           + + ++N                N+++   R   L + +K  + DI+CLQE   ++  F 
Sbjct: 65  LKIMSYNTLAQSLVRRTLFPTSGNALKWATRSKVLTSELKYYDADIMCLQEV--DEVQFE 122

Query: 47  ---FETLQSLNYHIET 59
               E L+ L Y  + 
Sbjct: 123 SYWKEKLKELGYEYKF 138


>gi|146420885|ref|XP_001486395.1| hypothetical protein PGUG_02066 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 444

 Score = 40.5 bits (93), Expect = 0.23,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 31/76 (40%), Gaps = 22/76 (28%)

Query: 4   VTVATWNV---------------NSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFP 46
           + + ++N                N+++   R   L + +K  + DI+CLQE   ++  F 
Sbjct: 65  LKIMSYNTLAQSLVRRTLFPTSGNALKWATRSKVLTSELKYYDADIMCLQEV--DEVQFE 122

Query: 47  ---FETLQSLNYHIET 59
               E L+ L Y  + 
Sbjct: 123 SYWKEKLKELGYEYKF 138


>gi|332022932|gb|EGI63200.1| hypothetical protein G5I_08437 [Acromyrmex echinatior]
          Length = 723

 Score = 40.5 bits (93), Expect = 0.24,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 62/232 (26%), Gaps = 43/232 (18%)

Query: 31  DIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDV 90
           DIICLQET  +  N                 +K+      ++    +    +        
Sbjct: 225 DIICLQETLLKQDN-------KFGTSSHIQFRKN------IASKGDMNAHQNTFWYCNYT 271

Query: 91  QARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIF 150
                     I+   L I N   P      +         +    +  S       P+  
Sbjct: 272 DKVGPILCNEIDRSNLIILNKDAPTLMQPPNLVLASPNLALIADPQTNSDSQGNHFPVCT 331

Query: 151 AGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDY 210
               N+   P   Y     +       E  +S   + N      I+              
Sbjct: 332 TIGGNVNAHPTFWYCDYTNKVGQIICSENDRSDLVILNKDAPTLIQPP------------ 379

Query: 211 YADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
                        D ++ SP     +  ++ D+ P    + SDH PV ++++
Sbjct: 380 -------------DLVLASPNLAP-IADSQTDSNP----QASDHFPVCITIE 413


>gi|261329150|emb|CBH12129.1| RNA-editing complex protein MP100 [Trypanosoma brucei gambiense
           DAL972]
          Length = 894

 Score = 40.5 bits (93), Expect = 0.24,   Method: Composition-based stats.
 Identities = 32/288 (11%), Positives = 74/288 (25%), Gaps = 32/288 (11%)

Query: 2   SVVTVATWNV-------------------NSIRARIHNLAAWIKENNPDIICLQETKTED 42
           + + + TWNV                    S + R   +A  I+E + D++ +QE   E 
Sbjct: 616 ASLKLLTWNVMFDRYSGKPTPLGMPGIDWCSPK-RYPVIAKIIEEEDADVVGMQEV--EP 672

Query: 43  KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN 102
             + F + + L            +          +     LP   ++             
Sbjct: 673 VFWEFLSKRPLIRQRYYFSCGHMSPAIAPWGVLMLIHRRRLPVQSINYLNVPAWTNHVSL 732

Query: 103 TQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD 162
              + +  ++                S         +         +  GD   +   +D
Sbjct: 733 MPVVGLKMVHGTVHIAAAHLLAPYTKSHENARTSQDTALRHHMTKTLGGGDVVTMGDFND 792

Query: 163 CYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR 222
                         ++              D             F+      + +++  R
Sbjct: 793 WPTNEFIMPHESQYVDCWPVLHPNDPGKTMDETNTFCKLKVEEMFFGRSDKVFLRSR--R 850

Query: 223 I----DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEP 266
           +     H++ +       ++A        +  PSDH  V ++  +  P
Sbjct: 851 LVPVEAHLVGTRSVNDENNNA----DAPAYLFPSDHYGVSITFSLKLP 894


>gi|213691505|ref|YP_002322091.1| Endonuclease/exonuclease/phosphatase [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|213522966|gb|ACJ51713.1| Endonuclease/exonuclease/phosphatase [Bifidobacterium longum subsp.
           infantis ATCC 15697]
 gi|320457581|dbj|BAJ68202.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis ATCC 15697]
          Length = 370

 Score = 40.5 bits (93), Expect = 0.24,   Method: Composition-based stats.
 Identities = 33/260 (12%), Positives = 67/260 (25%), Gaps = 47/260 (18%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTED--KNFPFETLQSLNYHIETCGQ 62
            V T+NV   +A    +   +++   +++ LQET TED  K      ++    + +    
Sbjct: 150 RVMTFNVYKGQADPQAIVELVRDQRVEVLALQET-TEDFVKKLNEAGIEHYLPYAQVSSS 208

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
               G  + S     +                         + + +       G      
Sbjct: 209 DGVFGNGLWSATPLADPADDDVNSSASFMPGGTVDMGGQQIRFISVHTTAPVPG------ 262

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                  W +        R   +   IF GD+N         + +               
Sbjct: 263 ---YWRQWKRSLDELGLMRRHTDTRYIFMGDFNATYDHTPFRDFL--------------- 304

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYA--DSWSKNKGIRIDHIMLSPEATSLLHSAR 240
                                 +S+    A    ++      IDH++L           +
Sbjct: 305 ------GDRFVDAARESGHGFTFSWPTNRATVPMFAG-----IDHVVLDQGM--KAGQCK 351

Query: 241 IDTKPRGWTKPSDHTPVIVS 260
           +          SDH  ++V+
Sbjct: 352 VVKVE-----GSDHAALLVT 366


>gi|115379792|ref|ZP_01466863.1| endonuclease/exonuclease/phosphatase [Stigmatella aurantiaca
          DW4/3-1]
 gi|310820726|ref|YP_003953084.1| endonuclease/exonuclease/phosphatase domain-containing protein
          [Stigmatella aurantiaca DW4/3-1]
 gi|115363210|gb|EAU62374.1| endonuclease/exonuclease/phosphatase [Stigmatella aurantiaca
          DW4/3-1]
 gi|309393798|gb|ADO71257.1| Endonuclease/exonuclease/phosphatase domain protein [Stigmatella
          aurantiaca DW4/3-1]
          Length = 254

 Score = 40.5 bits (93), Expect = 0.24,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 31/66 (46%), Gaps = 10/66 (15%)

Query: 4  VTVATWNVN-SI----RARIHNLAAWIKENNPDIICLQETK-----TEDKNFPFETLQSL 53
          +T+ ++N++  +    R  +H +   ++E + D+I LQE       T+ ++ P      L
Sbjct: 3  LTLVSYNIHSGVGTDGRFDLHRVGEVLRETHADVIALQEVGDFRSVTDREDQPEHLADML 62

Query: 54 NYHIET 59
            H+  
Sbjct: 63 GLHMAF 68


>gi|293373246|ref|ZP_06619606.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           ovatus SD CMC 3f]
 gi|292631769|gb|EFF50387.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           ovatus SD CMC 3f]
          Length = 217

 Score = 40.5 bits (93), Expect = 0.24,   Method: Composition-based stats.
 Identities = 29/264 (10%), Positives = 55/264 (20%), Gaps = 58/264 (21%)

Query: 2   SVVTVATWNVNS--IRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57
           S + + TWN     +   I    L   +     +++ +QE        P       +Y +
Sbjct: 8   SHMRICTWNSQGNPLNDAIKLNILNHLLTIEQCNVVMIQE--CGKFILPAHFSGIYHYVV 65

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
                                + +         ++         N  TL   +     G+
Sbjct: 66  VEQAGAYNYRGNTCIIADLNFVASIHYLISGTGRSAICLNYNGYNIYTLHCESGSGAVGD 125

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
                 +      I   +      L  E   I        P     +             
Sbjct: 126 IRDLVHHAVSPFIIGGDMNSTPSEL-SENLRIMTTGVRSRPGNSAHFACCGMPTHI---- 180

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
                                                     G  +D+ ++       L 
Sbjct: 181 -----------------------------------------SGRELDYFLIDSRL--QLR 197

Query: 238 SARIDTKPRGWTKPSDHTPVIVSL 261
           +       R   K  DH PVI+ +
Sbjct: 198 TCV----RRYHMKGGDHYPVILEI 217


>gi|71904339|ref|YP_281142.1| exodeoxyribonuclease III [Streptococcus pyogenes MGAS6180]
 gi|71803434|gb|AAX72787.1| exodeoxyribonuclease III [Streptococcus pyogenes MGAS6180]
          Length = 279

 Score = 40.5 bits (93), Expect = 0.24,   Method: Composition-based stats.
 Identities = 35/274 (12%), Positives = 77/274 (28%), Gaps = 20/274 (7%)

Query: 3   VVTVATWNVNSIRAR--IHNLAAW---IKENNPDIICLQETKTEDKNFPFETLQSLN-YH 56
           +  V T N +S      +  L A    I     DIICLQE    ++    E    L  Y 
Sbjct: 8   MTKVLTLNTHSWMQANTLKKLVALAEHILAEKYDIICLQEI---NQLIESELATDLPRYQ 64

Query: 57  IETCGQKSYNGVAI---------LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107
             +     +                ++       +  G D+  +   I +   I+   + 
Sbjct: 65  ALSGTPNIHKDHFALLLIHYLQKRGQHYYWSWAYNHIGYDIYQEGVAILSKQPIHVSDIL 124

Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167
           +  +          +         K            ++  +   +             +
Sbjct: 125 VSAMADETDYHTRRSLIAKTTLDGKEVAVVNVHLSWFDKGFLGEWEKLEKELLTLNCPLL 184

Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227
           +  +    T +          +   D+ +        +S            + +++DH+ 
Sbjct: 185 LMGDFNNPTDQDGYQVMMGSPLDLQDSHKVADHVFGDHSIVADIDGWQGNKEALKVDHVF 244

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
            S +    + S++I  +       SDH  + V+L
Sbjct: 245 TSKDFI--IRSSKITFEGGDAPVVSDHYGLEVTL 276


>gi|190573815|ref|YP_001971660.1| hypothetical protein Smlt1836 [Stenotrophomonas maltophilia K279a]
 gi|190011737|emb|CAQ45357.1| conserved hypothetical protein [Stenotrophomonas maltophilia K279a]
          Length = 298

 Score = 40.5 bits (93), Expect = 0.24,   Method: Composition-based stats.
 Identities = 33/273 (12%), Positives = 75/273 (27%), Gaps = 32/273 (11%)

Query: 4   VTVATWNVNSIRA------------RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51
           + V ++NV   R             R   +   I + +P +I  QE   E  ++  E L+
Sbjct: 44  LKVMSFNV---RTPADTEPGKRWPDRRDAMVKVILDAHPAVIGTQELVKEQADYLSEHLR 100

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
              +  E     S +    +     +  +       L        +    N     +   
Sbjct: 101 GYRWFGEGRRGGSGDEHMGVFYDSKVLAIEESGNFWLSDTPDVPGSITWGNLYPRMVTWA 160

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
                +      +           R   +   ++   +       +P          +  
Sbjct: 161 LFRRLDDGRRFYF----MNTHLPYRDEDEPRRVKGAELIGKRVEALPADLPVVLTGDFN- 215

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
               +     +++    +      +         +F D+   +  +     +D +++   
Sbjct: 216 ----SEPGGDTYKAFTRLLQDTRTQVKVPQGPRLTFHDFTGKATVQ-----LDWVLVRGF 266

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
                 S   D +      PSDH P++V LD P
Sbjct: 267 ---HARSFLTDDRRIDGVLPSDHFPLVVELDWP 296


>gi|312130952|ref|YP_003998292.1| endonuclease/exonuclease/phosphatase [Leadbetterella byssophila DSM
           17132]
 gi|311907498|gb|ADQ17939.1| Endonuclease/exonuclease/phosphatase [Leadbetterella byssophila DSM
           17132]
          Length = 274

 Score = 40.5 bits (93), Expect = 0.24,   Method: Composition-based stats.
 Identities = 42/269 (15%), Positives = 67/269 (24%), Gaps = 28/269 (10%)

Query: 4   VTVATWNV------NSIRA---RIHNLAAWIKENNPDIICLQETKTEDKNF--PFETLQS 52
           + VA++N+      +   A   R   +   IK +  DI   QE       F      +  
Sbjct: 21  LIVASYNLRMDTPKDGPNAWPNRKEMVKELIKYHEFDIFGTQE------GFIHQLNDISE 74

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           L       G    +G                   D        +             N  
Sbjct: 75  LK-EYAFTGSGRDDGKQAGEHSAIFYRKKRFKLLDSGDFWLSEDPDKPGKGWDATCCNRI 133

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
              G             +   F             L+ +       Q      P+I   D
Sbjct: 134 ASWGKFKDLKTKKTFYFFNVHFDHQGIVARRESGQLMISKI-----QEIAGKFPVILTGD 188

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                E  Q       +              + +   +  D+  KN   RID+I +S   
Sbjct: 189 FNSLPETDQIKAISGLLKDAYTSSIAPPYGPVGTANSFKLDAPLKN---RIDYIFVSGTM 245

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
             +L  A   T  +    PSDH P+   +
Sbjct: 246 -EVLKYAS-LTDHKDQRYPSDHLPIAAKI 272


>gi|255712199|ref|XP_002552382.1| KLTH0C03608p [Lachancea thermotolerans]
 gi|238933761|emb|CAR21944.1| KLTH0C03608p [Lachancea thermotolerans]
          Length = 495

 Score = 40.5 bits (93), Expect = 0.24,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 63/208 (30%), Gaps = 17/208 (8%)

Query: 15  RARIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYHIETCGQKSYN-GVAILS 72
           R+R+  L       N D++CLQE    + ++F  E  + L Y  +     + N G+AI+ 
Sbjct: 126 RSRV--LLNEFMHYNSDVLCLQEVDYIQYQSFWKEEFEKLGYESQFHRHGTKNHGIAIVW 183

Query: 73  KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI------------T 120
           K     +V  +  D     +  +E   T     L I   +                   T
Sbjct: 184 KRDMFTMVDKMLIDYDKEPSGALEPRTTTKNVGLAIALGFTKKVLAKYPGSSKRGIIVGT 243

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV- 179
           +  +       +R  +      +++E +             +      +  D        
Sbjct: 244 THLFWHPFGTFERTRQCYVMLNKMKEFMHRINVLQDKGATQENLWYPFFCGDFNSQPFDT 303

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSF 207
                  + + +    +   +    Y+F
Sbjct: 304 PYLSVSSKPVTYKGRAKTVIECSTSYTF 331


>gi|147902412|ref|NP_001089262.1| CCR4 carbon catabolite repression 4-like [Xenopus laevis]
 gi|58399136|gb|AAH89295.1| MGC85016 protein [Xenopus laevis]
          Length = 459

 Score = 40.5 bits (93), Expect = 0.24,   Method: Composition-based stats.
 Identities = 38/265 (14%), Positives = 74/265 (27%), Gaps = 22/265 (8%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFE--TLQSLNYHIET--CGQKSYNGVAILS 72
           R + +   I    PD++CLQE    D  F      L  L Y              V   +
Sbjct: 203 RKYLILEEILMYQPDVLCLQEV---DHYFDTFQPILSRLGYQCTFLAKPWSPCLDVEHNN 259

Query: 73  KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIK 132
                 +        L   ++   +  T+ T  + I                   ++ +K
Sbjct: 260 GPDGCALFFLQDRFQLVNSSKIRLSARTLKTNQVAIAETLQCCETGRLLC---FAVTHLK 316

Query: 133 RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192
               +   RL     L+   +               +  +    +  R +   L      
Sbjct: 317 ARTGWERFRLAQGTDLLHNLESITQGATVPLIICGDFNAEPTEEVYKRFASSSLNLNSAY 376

Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA-------RIDTKP 245
             +    ++   Y+ W       S +    +D+I  S  A   +++A       +I    
Sbjct: 377 KLLSEDGESEPPYTTWKIRPTGESCHT---LDYIWYSQHAL-RVNNALGLPTEEQIGPNR 432

Query: 246 R-GWTKPSDHTPVIVSLDIPEPRKK 269
              +  PSDH  ++      E   +
Sbjct: 433 LPSFNYPSDHLSLVCDFSFNEDPAR 457


>gi|330466241|ref|YP_004403984.1| endonuclease/exonuclease/phosphatase [Verrucosispora maris
           AB-18-032]
 gi|328809212|gb|AEB43384.1| endonuclease/exonuclease/phosphatase [Verrucosispora maris
           AB-18-032]
          Length = 650

 Score = 40.5 bits (93), Expect = 0.25,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 7/46 (15%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268
           IDHI +SP+         I       +  SDH PV V+L +P    
Sbjct: 611 IDHIFVSPDL-PTTDPVAI------ASTASDHLPVAVTLKLPPGTP 649


>gi|312382185|gb|EFR27728.1| hypothetical protein AND_05223 [Anopheles darlingi]
          Length = 518

 Score = 40.5 bits (93), Expect = 0.25,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 22/46 (47%), Gaps = 8/46 (17%)

Query: 1  MSV-VTVATWNVNSI------R-ARIHNLAAWIKENNPDIICLQET 38
          M++ +++ T N+  I      R  R+  +   +   N DI+ LQE 
Sbjct: 1  MAMELSILTLNIWGIPYISKDREVRVKAIGDVLASGNYDIVSLQEV 46


>gi|262170443|ref|ZP_06038121.1| extracellular nuclease-related protein [Vibrio mimicus MB-451]
 gi|261891519|gb|EEY37505.1| extracellular nuclease-related protein [Vibrio mimicus MB-451]
          Length = 867

 Score = 40.5 bits (93), Expect = 0.25,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 30/76 (39%), Gaps = 24/76 (31%)

Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSA---RI-----------------DTKPRG 247
           W Y   S++   G  +DH+++SP   + +  A    I                   K + 
Sbjct: 773 WSY---SFNDEVGA-LDHLLVSPSLKTKVVDATDWHINGAESTLFDYNDEFKGNLPKYKD 828

Query: 248 WTKPSDHTPVIVSLDI 263
             + SDH P ++ L+I
Sbjct: 829 QFRASDHDPAVLELNI 844


>gi|258625717|ref|ZP_05720596.1| Nuclease-related protein [Vibrio mimicus VM603]
 gi|258581955|gb|EEW06825.1| Nuclease-related protein [Vibrio mimicus VM603]
          Length = 869

 Score = 40.5 bits (93), Expect = 0.25,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 30/76 (39%), Gaps = 24/76 (31%)

Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSA---RI-----------------DTKPRG 247
           W Y   S++   G  +DH+++SP   + +  A    I                   K + 
Sbjct: 775 WSY---SFNDEVGA-LDHLLVSPSLKTKVVDATDWHINGAESTLFDYNDEFKGNLPKYKD 830

Query: 248 WTKPSDHTPVIVSLDI 263
             + SDH P ++ L+I
Sbjct: 831 QFRASDHDPAVLELNI 846


>gi|147844133|emb|CAN80567.1| hypothetical protein VITISV_004504 [Vitis vinifera]
          Length = 1627

 Score = 40.5 bits (93), Expect = 0.25,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 13/24 (54%)

Query: 18  IHNLAAWIKENNPDIICLQETKTE 41
              +   IK    D++CLQETK +
Sbjct: 775 RRLIKDVIKSQKADLVCLQETKIQ 798


>gi|147819043|emb|CAN71630.1| hypothetical protein VITISV_015580 [Vitis vinifera]
          Length = 1742

 Score = 40.5 bits (93), Expect = 0.25,   Method: Composition-based stats.
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 4/34 (11%)

Query: 13  SIRA----RIHNLAAWIKENNPDIICLQETKTED 42
             RA    +   + A IK+   D++CLQETK +D
Sbjct: 451 GXRANNCDKRKVIKALIKKQKVDLVCLQETKIQD 484


>gi|153214876|ref|ZP_01949674.1| hypothetical protein A55_2851 [Vibrio cholerae 1587]
 gi|124115035|gb|EAY33855.1| hypothetical protein A55_2851 [Vibrio cholerae 1587]
          Length = 869

 Score = 40.5 bits (93), Expect = 0.25,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 30/76 (39%), Gaps = 24/76 (31%)

Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSA---RI-----------------DTKPRG 247
           W Y   S++   G  +DH+++SP   + +  A    I                   K + 
Sbjct: 775 WSY---SFNDEVGA-LDHLLVSPSLKTKVVDATDWHINGAESTLFDYNDEFKGNLPKYKD 830

Query: 248 WTKPSDHTPVIVSLDI 263
             + SDH P ++ L+I
Sbjct: 831 QFRASDHDPAVLELNI 846


>gi|116179146|ref|XP_001219422.1| predicted protein [Chaetomium globosum CBS 148.51]
 gi|88184498|gb|EAQ91966.1| predicted protein [Chaetomium globosum CBS 148.51]
          Length = 376

 Score = 40.5 bits (93), Expect = 0.25,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 20/58 (34%), Gaps = 4/58 (6%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
           ID ++ S E    L   RI          SDH  +  + DI    ++ +        P
Sbjct: 278 IDLVLASAELIEQLLKCRIHP----CDHGSDHRAIETTFDIAGEDRQTETRLLFKDAP 331


>gi|302868995|ref|YP_003837632.1| endonuclease/exonuclease/phosphatase [Micromonospora aurantiaca
           ATCC 27029]
 gi|315504534|ref|YP_004083421.1| endonuclease/exonuclease/phosphatase [Micromonospora sp. L5]
 gi|302571854|gb|ADL48056.1| Endonuclease/exonuclease/phosphatase [Micromonospora aurantiaca
           ATCC 27029]
 gi|315411153|gb|ADU09270.1| Endonuclease/exonuclease/phosphatase [Micromonospora sp. L5]
          Length = 232

 Score = 40.5 bits (93), Expect = 0.25,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 3/44 (6%)

Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
            RID + + P  T  +    +   P    + SDH PV+V L +P
Sbjct: 190 RRIDALFVDPRIT--VVDYDVVDTP-AARRASDHFPVLVDLLLP 230


>gi|145553143|ref|XP_001462246.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124430085|emb|CAK94873.1| unnamed protein product [Paramecium tetraurelia]
          Length = 363

 Score = 40.5 bits (93), Expect = 0.25,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 37/102 (36%), Gaps = 1/102 (0%)

Query: 15  RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKY 74
           ++R   + + IK+  PDI+CLQE   ++ +     +Q   Y      +   N     + +
Sbjct: 24  KSRWPLIFSQIKKYKPDILCLQELDCDENDLSQLLIQD-QYEKLFLKRSQENQKDGCALF 82

Query: 75  QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
              +    +   +L ++   +            I  + +  G
Sbjct: 83  YLKQKYKLIKSYNLHLKQEHLFCNSKTRMDKPNICLIAVLQG 124


>gi|117622972|ref|YP_851885.1| metal-dependent hydrolase [Escherichia coli APEC O1]
 gi|115512096|gb|ABJ00171.1| Metal-dependent hydrolase [Escherichia coli APEC O1]
          Length = 253

 Score = 40.5 bits (93), Expect = 0.25,   Method: Composition-based stats.
 Identities = 34/267 (12%), Positives = 64/267 (23%), Gaps = 32/267 (11%)

Query: 5   TVATWNVN-SI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN--YH 56
            V T N++        R  +  L   ++  + DI+CLQE            +++     H
Sbjct: 11  KVLTINIHKGFTAFNRRFILPELRDAVRTVSTDIVCLQEV-MGAHEVHPLHVENWPDTSH 69

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
            E      ++  A        E               +     +++    R         
Sbjct: 70  YEFLADTMWSDFAYGRNAVYPEGHHGNAVLSRYPIEHYENRDVSVDGAEKRGVLYCRIVP 129

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
                  +   +    R     +Q   L E +    D   +    D  +     N     
Sbjct: 130 PMTGKAIHVMCVHLGLREAHRQAQLAMLAEWVNELPDGEPVLVAGDFNDWRQKANHPLKV 189

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
                      +                                +R+D I +     +  
Sbjct: 190 QAGLDEIFTRAHGRPARTFPVQFPL-------------------LRLDRIYV----KNAS 226

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263
            SA      R W   SDH P+   + +
Sbjct: 227 ASAPTALPLRTWRHLSDHAPLSAEIHL 253


>gi|297622787|ref|YP_003704221.1| endonuclease/exonuclease/phosphatase [Truepera radiovictrix DSM
           17093]
 gi|297163967|gb|ADI13678.1| Endonuclease/exonuclease/phosphatase [Truepera radiovictrix DSM
           17093]
          Length = 865

 Score = 40.5 bits (93), Expect = 0.25,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 25/73 (34%), Gaps = 23/73 (31%)

Query: 223 IDHIMLSPEATSLLHSARIDT----KPRGWT------------------KPSDHTPVIVS 260
           +D+ + SP   + +    I      +PR                     + SDH PVI+ 
Sbjct: 711 LDYALASPSLAAQVTGVDIWHINPDEPRALEYDSAPRFGGEDRFTPTPYRSSDHDPVIIG 770

Query: 261 LDIP-EPRKKQQD 272
           L +  EP  +   
Sbjct: 771 LSLTGEPAPEPTP 783


>gi|294931919|ref|XP_002780052.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239889896|gb|EER11847.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 286

 Score = 40.5 bits (93), Expect = 0.25,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 54/170 (31%), Gaps = 13/170 (7%)

Query: 9   WNVNSIRARIHN----LAAWIKENNPDIICLQETKTEDK-------NFPFETLQSL--NY 55
           WNV+S+RA +++    L    KE  P++I     +  D+             ++++    
Sbjct: 86  WNVDSLRALLNHNVQELIDLCKEEQPNVIGFMNIRLSDEEMCEQCDQLLRAAVENILGPV 145

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
                   +  G +  +      +        +   A     T T+    + +   Y+P+
Sbjct: 146 ETVWNRCTAKKGYSGTAMIVRKSVGKFDSKLGISDHADPEGRTITLEFDDMVVVLCYVPN 205

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYN 165
                                 A      ++P +  GD N+  +  D +N
Sbjct: 206 SGHGLYRLAYRTSGRRCFDAELAEYCKSFDKPTLLLGDMNVADRDVDIWN 255


>gi|256090393|ref|XP_002581177.1| hypothetical protein [Schistosoma mansoni]
 gi|238667023|emb|CAZ37416.1| conserved hypothetical protein [Schistosoma mansoni]
          Length = 144

 Score = 40.5 bits (93), Expect = 0.25,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 3/41 (7%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           IDHI +S   T     A      RG    SDH PV+  +++
Sbjct: 5   IDHICISKNFTRSTEDA---RTKRGADLASDHHPVMAKMEV 42


>gi|84501585|ref|ZP_00999757.1| endonuclease/exonuclease/phosphatase family protein [Oceanicola
           batsensis HTCC2597]
 gi|84390206|gb|EAQ02765.1| endonuclease/exonuclease/phosphatase family protein [Oceanicola
           batsensis HTCC2597]
          Length = 336

 Score = 40.5 bits (93), Expect = 0.25,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 12/53 (22%)

Query: 223 IDHIMLSPEATSLLHSARIDT---KPRGWTKP---------SDHTPVIVSLDI 263
           +D+IM+SP+  S     RI      P  W++P         SDH PV++ +D+
Sbjct: 284 LDYIMISPDLMSHNPRWRIWHPFDDPGCWSRPQLRDALITASDHFPVVLDIDL 336


>gi|310794858|gb|EFQ30319.1| endonuclease/Exonuclease/phosphatase [Glomerella graminicola
           M1.001]
          Length = 603

 Score = 40.5 bits (93), Expect = 0.25,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 25/68 (36%), Gaps = 11/68 (16%)

Query: 200 DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL----LHSARIDTKPRGWTKPSDHT 255
                Y++  Y  ++        +DHI +SP   +          +++        SDH 
Sbjct: 542 PAEERYTY-AYDMNAQE------LDHIFVSPALAARNGTAYEHIHVNSWELYDELVSDHD 594

Query: 256 PVIVSLDI 263
           P +  L++
Sbjct: 595 PSVARLNV 602


>gi|330994578|ref|ZP_08318501.1| endonuclease/exonuclease/phosphatase [Gluconacetobacter sp. SXCC-1]
 gi|329758219|gb|EGG74740.1| endonuclease/exonuclease/phosphatase [Gluconacetobacter sp. SXCC-1]
          Length = 216

 Score = 40.5 bits (93), Expect = 0.26,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 46/126 (36%), Gaps = 11/126 (8%)

Query: 4   VTVATWNVNSIR---ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           V V +WN+  +R   A + ++   I    PD++ +QE   +  + P        ++  + 
Sbjct: 17  VKVVSWNL--LRRIGATVRDVIELIHAERPDLLLMQEATVDIDSLPTLVG---GHYARSP 71

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
                +G+A  S +             L            ++ + L + N++L HG  + 
Sbjct: 72  LPGRIHGLACWSPHPY---RRPPLTCTLPAGTLIRRVAQVVDCRALVVANVHLSHGQLLN 128

Query: 121 STKYDD 126
             +   
Sbjct: 129 RRQLRR 134


>gi|294566525|gb|ADF18553.1| endonuclease-reverse transcriptase [Bombyx mori]
          Length = 989

 Score = 40.5 bits (93), Expect = 0.26,   Method: Composition-based stats.
 Identities = 37/272 (13%), Positives = 71/272 (26%), Gaps = 36/272 (13%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKEN----NPDIICLQET--------KTEDKNFPFETLQ 51
           + + T NV  +          I+        DI+ L E         KT + N       
Sbjct: 58  LRIGTLNVRGM--LKPGKQEVIEREMLRCKIDILGLSEVHRRGSGHIKTANGNIL----- 110

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
               +       S NGVAI+   +    V        D           +    +++   
Sbjct: 111 ----YFSGSENHSGNGVAIILPQKLESSVLGY-KTPSDRIIAVKLDARPVPINIVQVYAP 165

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
                  I+   Y +    ++         +  +           +       N  +   
Sbjct: 166 TSQSEEIISDQFYFELDDLLRTIPSKEVTVVYGDWNAKVGTTRGDVLLGATVGNFGL--G 223

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
                 E    F     +   +     H    LY++         +N+   ID+I +   
Sbjct: 224 VRNDRGEKFLQFCVENQLVIMNTWFEHHPR-RLYTWISPSGH---RNQ---IDYITIKSR 276

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             S + + +      G    SDH  V+    +
Sbjct: 277 WRSSVLNTKTLP---GADCGSDHQLVVADFRL 305


>gi|125624386|ref|YP_001032869.1| endonuclease/exonuclease/phosphatase family protein [Lactococcus
           lactis subsp. cremoris MG1363]
 gi|124493194|emb|CAL98159.1| endonuclease/exonuclease/phosphatase family protein [Lactococcus
           lactis subsp. cremoris MG1363]
 gi|300071173|gb|ADJ60573.1| endonuclease/exonuclease/phosphatase family protein [Lactococcus
           lactis subsp. cremoris NZ9000]
          Length = 352

 Score = 40.5 bits (93), Expect = 0.26,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 70/269 (26%), Gaps = 30/269 (11%)

Query: 14  IRARIHNLAAWIKENNPDIICLQET--------KTEDKNFPFETLQSL------NYHIET 59
           +++ I      IK+ NPD   +QE         +  +       L         NY    
Sbjct: 93  VKSAIQEDIRLIKKENPDFGNIQEIDWQGDRSQQVNEPQLVRAGLPDYSSVLTQNYDSAY 152

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-TQTLRIGNLYLPHGNP 118
                   +              +                  +  +   +  L + + + 
Sbjct: 153 LFYPVTKPIGKAKSGIMTYSKYEIENSTRYKLPIETNFNKFFDLDRAFSVSLLPIKNSDK 212

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
                     ++I        Q L L + +       +    +           A     
Sbjct: 213 KFVIFNTHLSAFITDQKIQKQQLLTLFDAMK----KYVNKGDYVICGADYNHALAGKAHP 268

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSF----WDYYADSWSKNKGIRIDHIMLSPEATS 234
                ++      T  +R    T+   +     + Y+  +     GI ID  ++S     
Sbjct: 269 ELTWMKEFPTENLTKGMRVVAPTNAP-TVRSLDFAYHQKNPKNTFGI-IDGFIVSNNIKD 326

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            L    ID +     K SDH PV++   +
Sbjct: 327 -LKIQTIDNQ----FKSSDHQPVLMDFSL 350


>gi|116179358|ref|XP_001219528.1| hypothetical protein CHGG_00307 [Chaetomium globosum CBS 148.51]
 gi|88184604|gb|EAQ92072.1| hypothetical protein CHGG_00307 [Chaetomium globosum CBS 148.51]
          Length = 1821

 Score = 40.5 bits (93), Expect = 0.26,   Method: Composition-based stats.
 Identities = 32/280 (11%), Positives = 76/280 (27%), Gaps = 41/280 (14%)

Query: 1   MS-VVTVATWNVNSIRARIHNL--AAWIKE---NNPDIICLQETKTEDKNFPFETLQ-SL 53
           MS  + +   NV     R   +   + + +    N  ++ +QE                +
Sbjct: 369 MSRTLRLIQLNV-----RKQGVVHESLMNDKDIQNATVLAIQEPHARR--IHGRLFTTPM 421

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDD-LDVQARFIEATFTINTQTLRIGNLY 112
            +H       S       +    + +   +  +           A   +  + + + ++Y
Sbjct: 422 GHHKWIKMVPSTWREGRWAVRSMLWVNKDVEAEQVPIGSPDMTAAILRLPGRRVLVVSVY 481

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
           +P           +    + + +  A +       ++ AGD+N         + +  E  
Sbjct: 482 VPK---QDPQALRETCDNLHKTIMGARRDAGTTVDVVIAGDFN-RHDQLWGGDDVSVEIK 537

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
                 +    +           +  H      +                ID ++ S E 
Sbjct: 538 GEADSIIDLMNEFALRSLLRRGTKTWHLGDSNTT----------------IDLVLASAEL 581

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLD--IPEPRKKQ 270
                   I     G    SDH  +    D  +P P+++ 
Sbjct: 582 AETTVKCAIHRTKHG----SDHRAIETVFDTLVPVPKERD 617


>gi|316973068|gb|EFV56700.1| sphingomyelin phosphodiesterase 2 [Trichinella spiralis]
          Length = 280

 Score = 40.5 bits (93), Expect = 0.26,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 62/227 (27%), Gaps = 24/227 (10%)

Query: 4   VTVATWNVNSI-----------RARIHNLAAWIKENNPDIICLQETKTEDK--NFPFETL 50
           + V T N   I           + RI  +A  +     DI+ LQE  +E+          
Sbjct: 7   LRVLTLNCWGIPLPFPFGSADRKVRIKEIAKELATGKYDIVSLQEIWSENDFNMIHDAVR 66

Query: 51  QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL---- 106
             + Y        + +GV + SK   +E + H    +  V        F      L    
Sbjct: 67  LVMPYSFYFHNGYAGSGVCVFSKGIILETLMHRYSLNGYVHHIHRGDWFGGKMVGLCRIQ 126

Query: 107 -------RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159
                            N         ++       +F    ++  E  I  GD N+ P 
Sbjct: 127 FSGININVYATHIHAEYNHDEDVYLAHRVVQAFELGQFMRNTMQNCEMAILMGDLNLRPT 186

Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYS 206
                      +     LE       L  +   D+ R      H ++
Sbjct: 187 DLGYDLIRHSASLKDAWLERSDDVILLACIVHMDSGRGIALAGHHFT 233


>gi|147767145|emb|CAN75646.1| hypothetical protein VITISV_031269 [Vitis vinifera]
          Length = 1701

 Score = 40.5 bits (93), Expect = 0.26,   Method: Composition-based stats.
 Identities = 16/133 (12%), Positives = 38/133 (28%), Gaps = 9/133 (6%)

Query: 130 WIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR--QSFQKLQ 187
              +        +           Y  +          +W +  C   +    +   + +
Sbjct: 593 CRFKNCEDGFNWIFSGVYGPTVKRYRELFWEELGAIRGLWSDPWCIGGDFNLIRFPNESR 652

Query: 188 NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRG 247
             G   +          +++    +   +     R+D  ++S +  S    A   T PR 
Sbjct: 653 RGGRLSSSMRRFSEGGPFTW----SGGLNNQAMTRLDRFLVSEDWESHFKGAVQCTLPR- 707

Query: 248 WTKPSDHTPVIVS 260
               SDH P+++ 
Sbjct: 708 --PVSDHFPILLD 718


>gi|116206820|ref|XP_001229219.1| hypothetical protein CHGG_02703 [Chaetomium globosum CBS 148.51]
 gi|88183300|gb|EAQ90768.1| hypothetical protein CHGG_02703 [Chaetomium globosum CBS 148.51]
          Length = 690

 Score = 40.5 bits (93), Expect = 0.26,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 22/59 (37%), Gaps = 7/59 (11%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
           IDH   S        +     + RG    SDH P I+  DI  P  +Q      N K +
Sbjct: 504 IDHFWASVGL----QTTYYGLEYRGK---SDHYPQILEADIGGPLPQQTQPGGWNWKMM 555


>gi|302410141|ref|XP_003002904.1| endonuclease/exonuclease/phosphatase family [Verticillium
           albo-atrum VaMs.102]
 gi|261357928|gb|EEY20356.1| endonuclease/exonuclease/phosphatase family [Verticillium
           albo-atrum VaMs.102]
          Length = 509

 Score = 40.5 bits (93), Expect = 0.26,   Method: Composition-based stats.
 Identities = 39/305 (12%), Positives = 82/305 (26%), Gaps = 62/305 (20%)

Query: 2   SVVTVATWN-------VNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
             + V T+N       V+        +  ++ E+N DI+ LQE   +          +L 
Sbjct: 226 KTLRVLTFNMWHGGTQVD--NYHEKQV-RFLLESNVDIVGLQE--DQSGRHAHRLAHALG 280

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           +H       + +    +    PI            V+         IN   + +G     
Sbjct: 281 WHY-----WASSRSVGVISRYPIAKKYGEINASGGVRIALDGDEQQINFWVVHLGYTPYG 335

Query: 115 HGNPITSTKYDDKISWIK-------------RFLRFASQRLELEEPLIFAGDYNIIPQPH 161
             +        + +   +               +       E    L+            
Sbjct: 336 PYDFCFDGMDVETVIERETKSGRTPQITDTLAAMEGQIASAEDVPVLLVGDFNAPSHLDW 395

Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY---SF---WDYYADSW 215
                      A        +  K  + G  D+ R  +         ++   + ++  + 
Sbjct: 396 TEALRKKNCGYANV---PWPTSVKTTDAGLVDSFRVANPDPVKVPGITWSPLFPFHDGA- 451

Query: 216 SKNKGI-----RIDHIMLSPEATSLLHSARIDTKPRGWTKPS----------DHTPVIVS 260
               G      RID I  +   T  + +++      G  KPS          DH  ++ +
Sbjct: 452 ---TGRPEPQDRIDFIYHAGNLT--VKNSK--DVVVGQPKPSPNHKQNEWTTDHATILTT 504

Query: 261 LDIPE 265
            ++P 
Sbjct: 505 YELPA 509


>gi|89074806|ref|ZP_01161260.1| putative exported phosphatase [Photobacterium sp. SKA34]
 gi|89049381|gb|EAR54943.1| putative exported phosphatase [Photobacterium sp. SKA34]
          Length = 436

 Score = 40.5 bits (93), Expect = 0.26,   Method: Composition-based stats.
 Identities = 47/318 (14%), Positives = 90/318 (28%), Gaps = 58/318 (18%)

Query: 7   ATWNVN-----S---IRARIHNLAAWIKENNPDII----------CLQETKTEDKNFPFE 48
            +WN+          ++  I  +   I   NPD+            +QE   +  + P E
Sbjct: 122 LSWNLWTGPGEGTPELKDHIKRVVEDIAAINPDVFLSIETYGKGAAIQEAMAKANHVPVE 181

Query: 49  TLQSLNYHIETCGQKSYNG------------VAILSKYQPIEIVTHLPGDDLDVQARFIE 96
            +   +Y+  TC   +               V    +     I       + +V    I 
Sbjct: 182 DI---HYYTITCNNPADQSSCQRGKGIDNLAVFSKYEIIDSFIYNGKTVGNFNVGGVKIN 238

Query: 97  ATFTINT--QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPL------ 148
                    Q + + + +L + + I     D  ++         S     E         
Sbjct: 239 VENKKTGIKQPVWVIDTWLHYKDDIEKPLDDYYLAKRDGTPLPESPVKTDENYRLPQAKE 298

Query: 149 ------IFAGDYNIIPQ----PHDCYNPIIWENDACFTLEVRQSFQK----LQNMGFTDA 194
                     + +  P      H+  + + +               K      + GF D+
Sbjct: 299 IIEVIEPLLSNADDTPIILGGDHNTVSHLDFAKKWKKAHYGVVLPFKVSKVFTDAGFKDS 358

Query: 195 IRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP--S 252
            R  H    LY    +   + + +   RID+I     A      + +   PR       S
Sbjct: 359 YREIHPNPILYPGSSWSPMNRTSDAPQRIDYIYY-KGAKLQATDSVMVDSPRAGFSHLTS 417

Query: 253 DHTPVIVSLDIPEPRKKQ 270
           DH  ++ S ++    KK 
Sbjct: 418 DHGAMLTSFNLSAFPKKD 435


>gi|289432089|ref|YP_003461962.1| endonuclease/exonuclease/phosphatase [Dehalococcoides sp. GT]
 gi|288945809|gb|ADC73506.1| Endonuclease/exonuclease/phosphatase [Dehalococcoides sp. GT]
          Length = 639

 Score = 40.5 bits (93), Expect = 0.27,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 21/40 (52%), Gaps = 5/40 (12%)

Query: 4   VTVATWNV-NSIRAR----IHNLAAWIKENNPDIICLQET 38
           + + T+N+ N    +    +  LA  I+++  D++ LQE 
Sbjct: 412 LRIMTYNLHNGFNTQGKLDMEALARVIEDSGADVVALQEI 451



 Score = 40.2 bits (92), Expect = 0.34,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 7/43 (16%)

Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
           RID+I  SPE    + S  I +        SDH  +I  + + 
Sbjct: 604 RIDYIWASPEI-EYIDSYTIVS------LASDHLAIIADIRLS 639


>gi|147807723|emb|CAN77758.1| hypothetical protein VITISV_035945 [Vitis vinifera]
          Length = 1859

 Score = 40.5 bits (93), Expect = 0.27,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 8/41 (19%)

Query: 4  VTVATWNVNSIRAR-----IHNLAAWIKENNPDIICLQETK 39
          + + +WNV   R          + A I+    D+ C+QETK
Sbjct: 3  LRLLSWNV---RXANDSSKRKVIKAMIRSQRVDLFCIQETK 40


>gi|147668908|ref|YP_001213726.1| endonuclease/exonuclease/phosphatase [Dehalococcoides sp. BAV1]
 gi|146269856|gb|ABQ16848.1| Endonuclease/exonuclease/phosphatase [Dehalococcoides sp. BAV1]
          Length = 639

 Score = 40.5 bits (93), Expect = 0.27,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 21/40 (52%), Gaps = 5/40 (12%)

Query: 4   VTVATWNV-NSIRAR----IHNLAAWIKENNPDIICLQET 38
           + + T+N+ N    +    +  LA  I+++  D++ LQE 
Sbjct: 412 LRIMTYNLHNGFNTQGKLDMEALARVIEDSGADVVALQEI 451



 Score = 40.2 bits (92), Expect = 0.34,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 7/43 (16%)

Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
           RID+I  SPE    + S  I +        SDH  +I  + + 
Sbjct: 604 RIDYIWASPEI-EYIDSYTIVS------LASDHLAIIADIRLS 639


>gi|89074584|ref|ZP_01161056.1| hypothetical protein SKA34_11975 [Photobacterium sp. SKA34]
 gi|89049688|gb|EAR55247.1| hypothetical protein SKA34_11975 [Photobacterium sp. SKA34]
          Length = 379

 Score = 40.5 bits (93), Expect = 0.27,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 17/70 (24%)

Query: 211 YADSWSKNKGIRIDHIMLSPEATSLLHSARI---DT---------KPRGWTKP---SDHT 255
             + W+   G+R+D+++ S      +    +   D            +G  KP   SDH 
Sbjct: 312 RKNEWTHLAGLRLDYVLPSENLE--VIKTGVFWPDKSDALRELILDCKGREKPVAGSDHR 369

Query: 256 PVIVSLDIPE 265
            V V ++I +
Sbjct: 370 MVWVDINIAD 379


>gi|295115708|emb|CBL36555.1| Metal-dependent hydrolase [butyrate-producing bacterium SM4/1]
          Length = 324

 Score = 40.5 bits (93), Expect = 0.27,   Method: Composition-based stats.
 Identities = 38/300 (12%), Positives = 70/300 (23%), Gaps = 53/300 (17%)

Query: 4   VTVATWNVNSIR-----ARIHNLAAWIKENNPDIICLQETK--TEDKNFPFETLQSLNYH 56
           + + T N +S+       ++      I +  PD+I LQE     + +    E L+   + 
Sbjct: 1   MKLLTLNTHSLEEKDYEKKLKIFTEEILKEKPDVIALQEVNQPLDGEEADGEVLKKSGFI 60

Query: 57  IETCGQKSYN---------------------GVAILSKYQPIEIVTHLPGDDLDVQARFI 95
                  S                        V        +    +  G  L  +    
Sbjct: 61  PCPSEPPSCAVPVRLGNHGLRAAQLLRRSGFLVFWTWTSAKVGYGKYDEGMALMSRRPIA 120

Query: 96  EATFTINTQTLRIGNL----------YLPHGNPITSTKYDDKISWIKRFLRFASQRLELE 145
           E +    T      N            +  G    S        W      F+ Q   L+
Sbjct: 121 EVSQLFLTDGRDYNNWKTRKALAITLNIGKGEEPVSFVTAHMGWWKDEEEPFSRQWERLD 180

Query: 146 EPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY 205
                      +    D         +    +         +  G  D           +
Sbjct: 181 AFASSLRRRADVWLMGDFNTQDSVRGEGYDRITASGWKDAYRAAGKRDGGITIPGAIDGW 240

Query: 206 SFWDYYADSWSKNK--GIRIDHIMLSP--EATSLLHSARID-TKPRGWTKPSDHTPVIVS 260
                        +  G+RID+I      ++        +   + R     SD  PV+  
Sbjct: 241 ---------REDGEVPGMRIDYIWYGRKHDSGDRKSRGDVLIEEVRTVFNGSD-CPVVSD 290


>gi|242039679|ref|XP_002467234.1| hypothetical protein SORBIDRAFT_01g021750 [Sorghum bicolor]
 gi|241921088|gb|EER94232.1| hypothetical protein SORBIDRAFT_01g021750 [Sorghum bicolor]
          Length = 426

 Score = 40.5 bits (93), Expect = 0.27,   Method: Composition-based stats.
 Identities = 25/264 (9%), Positives = 79/264 (29%), Gaps = 32/264 (12%)

Query: 4   VTVATWNVNS----IRA-RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           +T+ +WN       +R+ ++++LA  +      +  + ET+                   
Sbjct: 1   MTLLSWNCRGSGGSLRSSKMNHLARLLTSTKSQVCFISETR------------------- 41

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
                + +  ++++++  ++                 +  F++         ++    N 
Sbjct: 42  ---NSTISRTSLINRFNALDAFIIPAQGQSGGLWLIWKQDFSLTIVDQSPNYIFALCNNN 98

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
           + + ++     +        +         + A     +    D  N +  +  +     
Sbjct: 99  LDNRQFGLICLYGDPHHHNTTSIWMQVHDFVVANTNMPMFCMGDLNNIMHPDEKSGPGRP 158

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
             +      +            +   Y++ +    +    +  R+D  + + E   +   
Sbjct: 159 DLRRINSFCDSVKECGFIDLGYSGPAYTWTNKRFSTTPTFE--RLDRCLANAEWCMMYPR 216

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
             +   P      SDHTP++  LD
Sbjct: 217 TTVYHLPMLR---SDHTPILALLD 237


>gi|325916353|ref|ZP_08178628.1| metal-dependent hydrolase [Xanthomonas vesicatoria ATCC 35937]
 gi|325537401|gb|EGD09122.1| metal-dependent hydrolase [Xanthomonas vesicatoria ATCC 35937]
          Length = 255

 Score = 40.5 bits (93), Expect = 0.27,   Method: Composition-based stats.
 Identities = 15/95 (15%), Positives = 30/95 (31%), Gaps = 14/95 (14%)

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
             +A    +      + +        R    +  +++F  +  D         IDHI++S
Sbjct: 170 HPNAMLMGDFNCVADRPEMQALYRHTRLQPPSGVVHTFPSWRPD-------RAIDHILVS 222

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
                      I+         SDH  V + + +P
Sbjct: 223 DSLV-------IEHTEAIPAAFSDHLAVGMDIRVP 250


>gi|324520567|gb|ADY47668.1| Craniofacial development protein 2 [Ascaris suum]
          Length = 328

 Score = 40.5 bits (93), Expect = 0.27,   Method: Composition-based stats.
 Identities = 15/114 (13%), Positives = 40/114 (35%), Gaps = 14/114 (12%)

Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL-YSFWDYYADSWSKNKGIRIDHIM 227
                      +Q     +N             H   +++     D+  KN+   ID+I+
Sbjct: 81  NFGLGTRNPRGQQLVDFCENNRMKITNTFFKKRHGKKWTWRSPSGDA--KNE---IDYIL 135

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPR---KKQQDSTSQNM 278
           ++      +    +      +   SDH  V   L + + R   +++++ +++ +
Sbjct: 136 VNKAII--VKDTEVLNH---FQTGSDHRLVRTKLRLNDKRLWARRKRNKSTEKL 184


>gi|257068362|ref|YP_003154617.1| metal-dependent hydrolase [Brachybacterium faecium DSM 4810]
 gi|256559180|gb|ACU85027.1| metal-dependent hydrolase [Brachybacterium faecium DSM 4810]
          Length = 244

 Score = 40.5 bits (93), Expect = 0.27,   Method: Composition-based stats.
 Identities = 10/34 (29%), Positives = 20/34 (58%)

Query: 4  VTVATWNVNSIRARIHNLAAWIKENNPDIICLQE 37
          + + TWN+  +R  I  L   +++  PD++ +QE
Sbjct: 8  LRILTWNLWELRGDIAALIEAVEDLQPDVLLVQE 41


>gi|149377356|ref|ZP_01895101.1| extracellular nuclease, putative [Marinobacter algicola DG893]
 gi|149358368|gb|EDM46845.1| extracellular nuclease, putative [Marinobacter algicola DG893]
          Length = 588

 Score = 40.5 bits (93), Expect = 0.27,   Method: Composition-based stats.
 Identities = 35/265 (13%), Positives = 63/265 (23%), Gaps = 38/265 (14%)

Query: 29  NPDIICLQETKTEDKNFP-----FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHL 83
           +PDI+ + E   E+  +       E  ++L  H       +  G   +           +
Sbjct: 332 DPDILAVTE--MENDGYEGDSAIAELARALGPHWRYVDTNNNTGSDAIRTDLLYRSDRVV 389

Query: 84  PGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISW--------IKRFL 135
                                      +       I       K                
Sbjct: 390 AEGSASRLTTTPFDRRGRPPVAQIFRPINSDRALRIVVPHLKSKACRGAKGPNRDQDDGQ 449

Query: 136 RFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAI 195
              S R E     I    + +          I  + +A       Q  +    +      
Sbjct: 450 GCYSHRREQATRAIIRWTHALPHPNGLAGTMITGDMNAYAREAPLQLLEAAGFINTVHHF 509

Query: 196 RATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA---RIDTKP---RGWT 249
               DT   ++   Y     S      +D+ ++S      +  A    I++      G+ 
Sbjct: 510 HGCTDTSCKHT--SYRYHGRSGT----LDYSLVSNGLLPQIVGAHTWSINSDEPRALGYK 563

Query: 250 KP-----------SDHTPVIVSLDI 263
            P           SDH PVI  L +
Sbjct: 564 GPVTLPTGQPWRSSDHNPVITDLSL 588


>gi|156095775|ref|XP_001613922.1| sphingomyelin phosphodiesterase [Plasmodium vivax SaI-1]
 gi|148802796|gb|EDL44195.1| sphingomyelin phosphodiesterase, putative [Plasmodium vivax]
          Length = 753

 Score = 40.5 bits (93), Expect = 0.27,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 72/227 (31%), Gaps = 37/227 (16%)

Query: 73  KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN---PITSTKYDDKIS 129
            ++   I ++    D+      I     +N + + +   +L  G+               
Sbjct: 520 MHKHALIYSNCKFPDMFCTKGAIYLKCCVNNKPVNVIATHLQAGDTSDQQNCRWKQLNEL 579

Query: 130 WIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNM 189
               +    S  ++  EPL F GD+NI       +   +  +    +   +++ +   + 
Sbjct: 580 SNWVYNGAPSFHIKKNEPLFFVGDFNIRYHLDKSFFDRVLSSGCLNSSVTKKALETTYDS 639

Query: 190 GFTDAIRATHDTHHLYSF-WDYYADSWSKNKGIRIDHIMLSPE--ATSLLHSARIDTKPR 246
              D           YSF ++Y            +D+I+++ +    +L+    I    R
Sbjct: 640 YLNDYCMHM---ERDYSFKYNYT-----------LDYILVNNDSDVKTLVPQTAIQKDYR 685

Query: 247 -----------------GWTKPSDHTPVIVSLDIPEPRKKQQDSTSQ 276
                                PSDH P+  +  IP  R + Q   S 
Sbjct: 686 PIQIIKSLLGFIPYKCTYIHHPSDHFPIYATFKIPNQRGELQGRASP 732


>gi|118102266|ref|XP_001232552.1| PREDICTED: hypothetical protein isoform 2 [Gallus gallus]
          Length = 298

 Score = 40.5 bits (93), Expect = 0.27,   Method: Composition-based stats.
 Identities = 33/261 (12%), Positives = 68/261 (26%), Gaps = 30/261 (11%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDK--NFPFETLQSLNYHIETCGQKSYNGVAILSKY 74
           RI  +   + +   D++ LQE  +E    +   +      +          +G+ + SK+
Sbjct: 29  RIRLIGDRLCQEGFDLVLLQEIWSERDYSDLKAKLGGCCPFSHYFRSGVIGSGLCVFSKF 88

Query: 75  QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI-----------GNLYLPHGNPITSTK 123
             ++ + +    +           F   +  L +                   +      
Sbjct: 89  PILDTLLYQYSLNGYPYMLQHGDWFCGKSVGLVVVRIAEITFNIYVTHLHAEYSREKDAY 148

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
              ++       +F     +  + ++  GD N+ P          W        E +   
Sbjct: 149 LPHRVVQAWELAQFICHTAKAADVVLLGGDLNMHPGDVGVRLLRGWTGLHDAFTEAKHFE 208

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
                         T  +                  GIRID+I+     +S         
Sbjct: 209 GCEDGCTLIPNNCFTVKSELQ-----------PFPLGIRIDYILY-KAVSSFTVKCEELR 256

Query: 244 ----KPRGWTKP-SDHTPVIV 259
                  G   P SDH  V+ 
Sbjct: 257 TTTGTVPGMDIPYSDHEAVMA 277


>gi|327182593|gb|AEA31040.1| hypothetical protein LAB52_00220 [Lactobacillus amylovorus GRL
           1118]
          Length = 367

 Score = 40.5 bits (93), Expect = 0.28,   Method: Composition-based stats.
 Identities = 37/273 (13%), Positives = 70/273 (25%), Gaps = 29/273 (10%)

Query: 13  SIRARIHNLAAWIKENNPDIICLQETKTEDK--------NFPFETLQSL------NYHIE 58
           S+ A    +   +K+ NPD +  QE  T           N      ++       N+H  
Sbjct: 101 SVLASTDGVIKTMKKQNPDFMLFQEIDTHSTRSHYVNQVNLVEHAFKNYDHVFANNFHSA 160

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPG--DDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                 Y+    +          H+          +    + FT   +   + +  +  G
Sbjct: 161 YLDWPLYDPHGSVQSGLLSMSKYHMQSAVRRKYPVSSAFISKFTDLDRCFTVMHYPIKGG 220

Query: 117 NP---ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
                I S           R  +       +E     AG+Y I+    +           
Sbjct: 221 KELIVINSHMSAYDKGGKMRKAQMKILSKVIEAEYK-AGNYVIVGGDFNHALGRDMLTHF 279

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSP 230
               ++      L               +   + +          K N     D  ++S 
Sbjct: 280 DHQEKIPSWVSVLDQKMLPKDFIMVKATNRERVATVRSTDMKYRPKVNYQTVGDGFIISK 339

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              +      I+T  R      DH PV +   +
Sbjct: 340 NIKAKATD--INTDYRYA----DHNPVRLGFSL 366


>gi|226310908|ref|YP_002770802.1| hypothetical protein BBR47_13210 [Brevibacillus brevis NBRC 100599]
 gi|226093856|dbj|BAH42298.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 1829

 Score = 40.5 bits (93), Expect = 0.28,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 30/77 (38%), Gaps = 10/77 (12%)

Query: 200  DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS--LLHSARIDTKPRGWT-KPSDHTP 256
                 Y++  Y  +S        +D I++S        +    I+        + SDH P
Sbjct: 1210 PKGEQYTYV-YQGNSQV------LDQILVSNHLEDDTKVDIVHINAGLTENEGRVSDHNP 1262

Query: 257  VIVSLDIPEPRKKQQDS 273
            V+V LD+ +    ++ +
Sbjct: 1263 VLVQLDLKDRGTPEKTA 1279


>gi|110639788|ref|YP_679998.1| endonuclease/exonuclease/phosphatase family protein [Cytophaga
           hutchinsonii ATCC 33406]
 gi|110282469|gb|ABG60655.1| endonuclease/exonuclease/phosphatase family protein [Cytophaga
           hutchinsonii ATCC 33406]
          Length = 339

 Score = 40.5 bits (93), Expect = 0.28,   Method: Composition-based stats.
 Identities = 33/260 (12%), Positives = 72/260 (27%), Gaps = 51/260 (19%)

Query: 19  HNLAAWIKENNPDIICLQETKTEDKNFPFETLQ------SLNYHIETCGQKSYNGVAILS 72
             +  +IK++  D++CLQE   + K+  F T+          Y  ET   ++     ++ 
Sbjct: 103 RKIIDFIKKSEADVLCLQEFYNDPKDTLFNTIHRIRKKYKYYYFSETYKNRAGASFGMII 162

Query: 73  KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIK 132
             +                 + I A   +  +T+RI N++L   +       +       
Sbjct: 163 FSKYPIKNRGKVVFHERSNNQTIYADVLLPNKTVRIYNMHLQSMSINDKEIAESNFDTKS 222

Query: 133 RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192
           +     +     +  +                                       +    
Sbjct: 223 KTNVLNAFTKFKKGTIN------------------------RSIQVDTLVGHIKASPYKV 258

Query: 193 DAIRATHDTHHLYSF---WDYYADSW-SKNKG-----------IRIDHIMLSPEATSLLH 237
                 +D  + Y++    D   +++  K  G           +RID      +      
Sbjct: 259 IVCGDLNDPPYSYTYETLSDQLNNAFEEKGNGLGITFNGRLPFLRIDQQFCDQDIE---- 314

Query: 238 SARIDTKPRGWTKPSDHTPV 257
              I  + +     +DH PV
Sbjct: 315 --VIRFETQHNITYTDHFPV 332


>gi|325963443|ref|YP_004241349.1| endonuclease/exonuclease/phosphatase family protein [Arthrobacter
          phenanthrenivorans Sphe3]
 gi|323469530|gb|ADX73215.1| endonuclease/exonuclease/phosphatase family protein [Arthrobacter
          phenanthrenivorans Sphe3]
          Length = 225

 Score = 40.5 bits (93), Expect = 0.28,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 9/43 (20%)

Query: 4  VTVATWNVNSIRARIHN----LAAWIKENNPDIICLQETKTED 42
          + V ++N      R H     L A  + ++ D +CLQE    D
Sbjct: 1  MRVISYN-----LRKHKASGELLALARNHDIDALCLQEVDASD 38


>gi|302540364|ref|ZP_07292706.1| PE-PGRS family protein [Streptomyces hygroscopicus ATCC 53653]
 gi|302457982|gb|EFL21075.1| PE-PGRS family protein [Streptomyces himastatinicus ATCC 53653]
          Length = 290

 Score = 40.5 bits (93), Expect = 0.28,   Method: Composition-based stats.
 Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 5/46 (10%)

Query: 221 IRIDHIMLSPEATSLLHSARIDTKPR-----GWTKPSDHTPVIVSL 261
            RID  +LSP  T  L S +    PR     G    SDH P+ + L
Sbjct: 242 RRIDVFLLSPALTGALASYQAVDDPRLLPHDGRPGASDHRPITLRL 287


>gi|300772811|ref|ZP_07082681.1| possible secreted protein [Sphingobacterium spiritivorum ATCC
           33861]
 gi|300761114|gb|EFK57940.1| possible secreted protein [Sphingobacterium spiritivorum ATCC
           33861]
          Length = 269

 Score = 40.5 bits (93), Expect = 0.29,   Method: Composition-based stats.
 Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 15/70 (21%)

Query: 2   SVVTVATWNV------NSIRARIHNLAAWIKENNPDIICLQET--------KTEDKNFPF 47
           S +TV T+N+      NS    + N+A  IK+ NPD++ LQE         K +      
Sbjct: 35  SKLTVITYNIHHGAPENSEVVNLENIANTIKQKNPDLVALQEVDVNVPRSGKVDQAKKLA 94

Query: 48  ETLQSLNYHI 57
           E L ++NY+ 
Sbjct: 95  ELL-NMNYYF 103


>gi|227538193|ref|ZP_03968242.1| endonuclease/exonuclease/phosphatase [Sphingobacterium spiritivorum
           ATCC 33300]
 gi|227241962|gb|EEI91977.1| endonuclease/exonuclease/phosphatase [Sphingobacterium spiritivorum
           ATCC 33300]
          Length = 269

 Score = 40.5 bits (93), Expect = 0.29,   Method: Composition-based stats.
 Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 15/70 (21%)

Query: 2   SVVTVATWNV------NSIRARIHNLAAWIKENNPDIICLQET--------KTEDKNFPF 47
           S +TV T+N+      NS    + N+A  IK+ NPD++ LQE         K +      
Sbjct: 35  SKLTVITYNIHHGAPENSEVVNLENIANTIKQKNPDLVALQEVDVNVPRSGKVDQAKKLA 94

Query: 48  ETLQSLNYHI 57
           E L ++NY+ 
Sbjct: 95  ELL-NMNYYF 103


>gi|167756050|ref|ZP_02428177.1| hypothetical protein CLORAM_01570 [Clostridium ramosum DSM 1402]
 gi|237734036|ref|ZP_04564517.1| glycosyl hydrolase [Mollicutes bacterium D7]
 gi|167704042|gb|EDS18621.1| hypothetical protein CLORAM_01570 [Clostridium ramosum DSM 1402]
 gi|229382862|gb|EEO32953.1| glycosyl hydrolase [Coprobacillus sp. D7]
          Length = 1946

 Score = 40.5 bits (93), Expect = 0.29,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 26/67 (38%), Gaps = 18/67 (26%)

Query: 1  MSVVTV---------ATWNVNSIRAR-----IHNLAAWIKENNPDIICLQETKTEDKNFP 46
          M ++ V         AT+N+    A      I  L   +K NN DI+ LQE        P
Sbjct: 22 MPMMKVTAATDNVRLATFNI----AANKKPDITKLNELLKTNNVDIVGLQEVDINTSRNP 77

Query: 47 FETLQSL 53
          +  L+  
Sbjct: 78 YNMLEKF 84


>gi|147788673|emb|CAN65298.1| hypothetical protein VITISV_008130 [Vitis vinifera]
          Length = 1936

 Score = 40.5 bits (93), Expect = 0.29,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 23/62 (37%), Gaps = 11/62 (17%)

Query: 201 THHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKP-SDHTPVI 258
               +++          N+   R+D  ++SP        A      R   +P SDH P++
Sbjct: 889 QGGSFTW-----SGGLNNQXWARLDRFLVSPNWIDQYSRAI----QRRLPRPISDHFPIL 939

Query: 259 VS 260
           + 
Sbjct: 940 LE 941


>gi|321452771|gb|EFX64087.1| hypothetical protein DAPPUDRAFT_267098 [Daphnia pulex]
          Length = 310

 Score = 40.5 bits (93), Expect = 0.29,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 2/37 (5%)

Query: 4  VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQET 38
          + VA+ N+  I    R+  L  +   N  D+ICLQE 
Sbjct: 1  MKVASINIARISTPERLQLLLNYCVSNEFDVICLQEV 37


>gi|242023630|ref|XP_002432235.1| Nocturnin, putative [Pediculus humanus corporis]
 gi|212517632|gb|EEB19497.1| Nocturnin, putative [Pediculus humanus corporis]
          Length = 525

 Score = 40.5 bits (93), Expect = 0.29,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 20/56 (35%)

Query: 3   VVTVATWNV---------------N---SIR--ARIHNLAAWIKENNPDIICLQET 38
           ++TV ++NV               N   S++   R   L   IKE + DI+CLQE 
Sbjct: 173 LITVVSYNVLSQSLLEKHRYLYKRNDEKSLKWEVRSKLLIEEIKEFDADILCLQEI 228


>gi|171778868|ref|ZP_02919930.1| hypothetical protein STRINF_00789 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282514|gb|EDT47938.1| hypothetical protein STRINF_00789 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 271

 Score = 40.5 bits (93), Expect = 0.29,   Method: Composition-based stats.
 Identities = 34/276 (12%), Positives = 76/276 (27%), Gaps = 26/276 (9%)

Query: 5   TVATWN------VNSIRARIHNLAAWIKE---NNPDIICLQETKTEDKNFPFETLQSL-- 53
              T N       NS+      L    +     N D+ICLQE   + +    + ++    
Sbjct: 3   KFLTLNTHSWLEANSL----KKLFDLAENIYIENYDVICLQEINQDIRGLAAKDVEGYEK 58

Query: 54  -----NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108
                  H +    +  N +    ++       +  G D   +   I +   I  + + +
Sbjct: 59  LPGSPELHCDNYALQLVNYLKSQGRHYYWSWAYNHIGYDKYNEGVVILSKNPIKVKDILV 118

Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168
             +   H          +     K     +       +                    ++
Sbjct: 119 SEVDDEHDYHTRRVLAAETEVDGKPVTVVSLHMSWFGKGFESEWAKLEKALSDFPKPLVL 178

Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
             +    T            +   D+ +        ++  +         + +++DH+  
Sbjct: 179 MGDFNNPTDTAGYDMILNSPLELQDSHKVAKSIQGDHTIIEDIDGWEGNKQSLKVDHVFT 238

Query: 229 SPEATSLLHSARIDTKPRGWTKP--SDHTPVIVSLD 262
           S E    + S+ +     G   P  SDH  + V L+
Sbjct: 239 SKEIE--IQSSTVVFD--GGESPIVSDHFGLAVDLN 270


>gi|168700428|ref|ZP_02732705.1| probable secreted protein [Gemmata obscuriglobus UQM 2246]
          Length = 263

 Score = 40.5 bits (93), Expect = 0.29,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 22/43 (51%), Gaps = 7/43 (16%)

Query: 2  SVVTVATWNV------NSIRARIHNLAAWIKENNPDIICLQET 38
          +V+ V T+N+      +  +  +  +A  IK   PD++ LQE 
Sbjct: 25 NVLRVLTYNIHHGEGTDG-KLDLARIAEVIKAAKPDVVALQEV 66


>gi|268567764|ref|XP_002647867.1| Hypothetical protein CBG23668 [Caenorhabditis briggsae]
          Length = 526

 Score = 40.5 bits (93), Expect = 0.29,   Method: Composition-based stats.
 Identities = 22/202 (10%), Positives = 51/202 (25%), Gaps = 25/202 (12%)

Query: 4   VTVATWNVNSI----------RA-RIHNLAAWIKENNPDIICLQETKTEDK--NFPFETL 50
           + + T N   +          R  R+  +  +++    DI+ LQE  + +       +  
Sbjct: 43  LRIVTLNAWCLPQPWPIGSTDRVHRLQKIGEYMRNETYDIVGLQELWSYNDFVRLSEQVK 102

Query: 51  QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR--- 107
            +  Y        + +GV + S++  +  +T     +           F      L    
Sbjct: 103 DAYPYFHYFHSGFTGSGVCVFSRHPIVSTLTSRYSLNGFAHHIHRGDWFGGKVVGLTEVE 162

Query: 108 ---------IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP 158
                             +         + +      +F        + +I  GD N+ P
Sbjct: 163 IDGDLRVNFYTTHLHAEYDRENDLYLPHRTAQSFELAQFVRHTARGADVVIVTGDLNMEP 222

Query: 159 QPHDCYNPIIWENDACFTLEVR 180
                   +             
Sbjct: 223 CDLGFRLILSHAKLFDAWRMSH 244


>gi|270008339|gb|EFA04787.1| hypothetical protein TcasGA2_TC014836 [Tribolium castaneum]
          Length = 348

 Score = 40.5 bits (93), Expect = 0.30,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 6/50 (12%)

Query: 224 DHIMLSPEATSLLHS-ARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQD 272
           DHI+++   ++     A I     G T  SDH P++  L + +PR    +
Sbjct: 65  DHILVTDSLSNRASDSANI-----GTTITSDHLPLVFDLSVSKPRTPTPE 109


>gi|147791764|emb|CAN75044.1| hypothetical protein VITISV_023140 [Vitis vinifera]
          Length = 170

 Score = 40.5 bits (93), Expect = 0.30,   Method: Composition-based stats.
 Identities = 9/61 (14%), Positives = 22/61 (36%), Gaps = 9/61 (14%)

Query: 201 THHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
              L+++     +    N+   R+D  +++              + R     SDH P+++
Sbjct: 19  QGGLFTW-----NGGQNNQSWARLDRFLVTQNWLDQFSGVL---QSRLPRPTSDHFPILL 70

Query: 260 S 260
            
Sbjct: 71  E 71


>gi|321452722|gb|EFX64044.1| hypothetical protein DAPPUDRAFT_118585 [Daphnia pulex]
          Length = 432

 Score = 40.2 bits (92), Expect = 0.30,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 2/38 (5%)

Query: 3   VVTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQET 38
           ++ V + N+  I    R+  L  +   N  D+ICLQE 
Sbjct: 129 IMKVTSINIARISTPERLQLLLNYCVSNEFDVICLQEV 166


>gi|321449105|gb|EFX61732.1| hypothetical protein DAPPUDRAFT_121080 [Daphnia pulex]
          Length = 514

 Score = 40.2 bits (92), Expect = 0.30,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 2/38 (5%)

Query: 3   VVTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQET 38
           ++ V + N+  I    R+  L  +   N  D+ICLQE 
Sbjct: 338 IMKVTSINIARISTPERLQLLLNYCVSNEFDVICLQEV 375


>gi|322390045|ref|ZP_08063581.1| endonuclease/exonuclease/phosphatase [Streptococcus parasanguinis
           ATCC 903]
 gi|321143252|gb|EFX38694.1| endonuclease/exonuclease/phosphatase [Streptococcus parasanguinis
           ATCC 903]
          Length = 793

 Score = 40.2 bits (92), Expect = 0.30,   Method: Composition-based stats.
 Identities = 17/88 (19%), Positives = 31/88 (35%), Gaps = 10/88 (11%)

Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT--- 249
             + A HD    YS++ Y   +        +D+I +S    +      +           
Sbjct: 609 TNLMAQHDAGDRYSYF-YRGSNQV------LDNIFISNNMAAKARFEPVHINASFMKEHG 661

Query: 250 KPSDHTPVIVSLDIPEPRKKQQDSTSQN 277
           + SDH PV+V +D    +     +  Q 
Sbjct: 662 RASDHDPVLVQIDFSGAQTPGTPTDDQQ 689


>gi|291239149|ref|XP_002739487.1| PREDICTED: reverse transcriptase-like protein-like [Saccoglossus
           kowalevskii]
          Length = 776

 Score = 40.2 bits (92), Expect = 0.30,   Method: Composition-based stats.
 Identities = 43/261 (16%), Positives = 84/261 (32%), Gaps = 42/261 (16%)

Query: 9   WNVNSIRARIHNLAAWIKENNPDIICLQE--TKTEDKNFPFETLQSLNYHIETCGQKSYN 66
           WNV+ I+ +   ++ +I E+N D + + E   K          +    Y      +    
Sbjct: 81  WNVHLIQNKATLISDYIVEHNIDALAITESWLKASGDEPIINEVTPAGYTYHHFPRVKST 140

Query: 67  GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDD 126
           G  I   ++    VT             +EAT   +  T ++  +Y P  N         
Sbjct: 141 GGGIAFIFKSSITVTTWKPLQNVTTFEAVEATLRYHGITFKVIIVYRPPPNTKNKFTVSK 200

Query: 127 KISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL 186
             +     L         E    + G+ +II   +  +  +  + +     E+  S    
Sbjct: 201 FFNEFGDLL---------ESSSTYTGNLSIIGDFNFHWANVSPDPNTRKFQELLDSCNLK 251

Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR 246
           Q          T    H ++F                D +  +P+    + +  +DT   
Sbjct: 252 Q-------WVNTPTHTHGHTF----------------DLVFTNPDL---ILNVTVDT--- 282

Query: 247 GWTKPSDHTPVIVSLDIPEPR 267
                SDH P+ + + +P+P 
Sbjct: 283 --VYISDHFPIYIQVLLPKPP 301


>gi|67904338|ref|XP_682425.1| hypothetical protein AN9156.2 [Aspergillus nidulans FGSC A4]
 gi|40742799|gb|EAA61989.1| hypothetical protein AN9156.2 [Aspergillus nidulans FGSC A4]
 gi|259485420|tpe|CBF82427.1| TPA: endonuclease/exonuclease/phosphatase family protein
           (AFU_orthologue; AFUA_3G09210) [Aspergillus nidulans
           FGSC A4]
          Length = 600

 Score = 40.2 bits (92), Expect = 0.30,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 20/45 (44%), Gaps = 2/45 (4%)

Query: 223 IDHIMLSPEATS--LLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           +DH+ +S        +    ++T       PSDH P +  L++ E
Sbjct: 556 LDHMFVSEALAEGARMEHVHVNTWVNYDDAPSDHDPSVAVLNVCE 600


>gi|147812508|emb|CAN68382.1| hypothetical protein VITISV_041532 [Vitis vinifera]
          Length = 964

 Score = 40.2 bits (92), Expect = 0.30,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 15/92 (16%)

Query: 1   MSVVT--VATWNV--------NSI---RARIHNLAAWIKENNPDIICLQETKTE--DKNF 45
           M+ V   + + N+        N     R +   +  +++  NPD++ +QETK E  D+ F
Sbjct: 157 MAKVREVLCSLNIKVYSRRKNNGSTGSRNKRRMVKDFLRSKNPDVVMIQETKKEKCDRRF 216

Query: 46  PFETLQSLNYHIETCGQKSYNGVAILSKYQPI 77
               LQ  N+        S         ++ +
Sbjct: 217 ENMWLQHPNFKENFRNWWSGYQGYGWEGHKFM 248


>gi|47567314|ref|ZP_00238027.1| endonuclease/exonuclease/phosphatase family protein, putative
           [Bacillus cereus G9241]
 gi|47555935|gb|EAL14273.1| endonuclease/exonuclease/phosphatase family protein, putative
           [Bacillus cereus G9241]
          Length = 327

 Score = 40.2 bits (92), Expect = 0.30,   Method: Composition-based stats.
 Identities = 45/274 (16%), Positives = 79/274 (28%), Gaps = 34/274 (12%)

Query: 11  VNSIRARIHNLAAWIKENNPDIICLQET--K------TEDKNFPFETLQSL------NYH 56
           VN     + N+ ++++    D   LQE   K        +  F  + L         NY 
Sbjct: 66  VN-----LKNMLSFLQNEKSDFALLQEVDIKSMRSFDVNEHEFLKKGLPDYVSSFGKNYD 120

Query: 57  IETCGQKSYNGVAI-------LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
            +       N +          SKY                  R  +    I   T+ + 
Sbjct: 121 TKWVPVPITNPMGYAEAGLSTFSKYTVQTAKRFQLPGMEPWPKRLFDLDRAIVEHTIPVN 180

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
           N        +  + YD+     K+ + F  + +         GDY I+    +       
Sbjct: 181 NGKHVRLVNLHLSAYDEGGKIRKQQVEFLKEYMNKHYKN---GDYVIMGGDWNQLVSNAQ 237

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
            +D  F  E  +   +L         +   D   +    D       +N    ID  ++S
Sbjct: 238 LSDPKFVKERPEWLVELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVS 297

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           P     +    +  K   +   SDH PV     +
Sbjct: 298 PN----VEIVNVQGKDLKFEN-SDHNPVSAVFKL 326


>gi|228942241|ref|ZP_04104781.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|228975171|ref|ZP_04135730.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228981810|ref|ZP_04142105.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis Bt407]
 gi|228777922|gb|EEM26194.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis Bt407]
 gi|228784692|gb|EEM32712.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228817575|gb|EEM63660.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|326942895|gb|AEA18791.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           thuringiensis serovar chinensis CT-43]
          Length = 352

 Score = 40.2 bits (92), Expect = 0.31,   Method: Composition-based stats.
 Identities = 44/267 (16%), Positives = 78/267 (29%), Gaps = 29/267 (10%)

Query: 18  IHNLAAWIKENNPDIICLQET--K------TEDKNFPFETLQSL------NYHIETCGQK 63
           + N+ ++++  N D   LQE   K        +  F  + L         NY  +     
Sbjct: 93  LKNMLSFLQNENSDFALLQEVDIKSLRSFDVNEHEFLKKGLPDYVSSFGKNYDTKWVPVP 152

Query: 64  SYNGVAI-------LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
             N +          SKY   E              R  +    I    + + N      
Sbjct: 153 ITNPMGYAEAGLSTFSKYTVQEAKRFQLPGMEPWPKRLFDLDRAIVEYKIPVNNGKHVRL 212

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
             +  + YD+     K+ + +  + +         GDY II    +        +D  F 
Sbjct: 213 VNLHLSAYDEGGKIRKQQVEYLKEYMNKHYEN---GDYVIIGGDWNQLVSNAQLSDPKFV 269

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
            E  +   +L         +   D   +    D       +N    ID  ++SP     +
Sbjct: 270 KERPEWLVELPKDFTDGGFKWAVDPSVMTVRDDVKKYVEGENFVTIIDGFIVSPN----V 325

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263
               +  K   +   SDH PV     +
Sbjct: 326 EIVNVQGKDLKFEN-SDHNPVSAVFKL 351


>gi|219126251|ref|XP_002183375.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217405131|gb|EEC45075.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 808

 Score = 40.2 bits (92), Expect = 0.31,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 28/81 (34%), Gaps = 32/81 (39%)

Query: 3   VVTVATWN------------VN---SIR-------ARIHNLAAWIKE----NNP--DIIC 34
            ++V +WN            VN   S R       AR   + A +K       P  D++C
Sbjct: 78  TISVVSWNMLAEAYCSPRSHVNLPASYRKVVFDRTARRDRIFAILKRLAQQQQPVIDVLC 137

Query: 35  LQETKTEDKNFPFETLQSLNY 55
           LQE          + LQ   Y
Sbjct: 138 LQEVDVHLD----DALQRWGY 154


>gi|149191611|ref|ZP_01869856.1| extracellular nuclease-related protein [Vibrio shilonii AK1]
 gi|148834569|gb|EDL51561.1| extracellular nuclease-related protein [Vibrio shilonii AK1]
          Length = 872

 Score = 40.2 bits (92), Expect = 0.31,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 32/97 (32%), Gaps = 29/97 (29%)

Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA---RI-- 241
            + G+ + +   H     YS+ D             +DHI++SP  +  +  A    I  
Sbjct: 761 HSYGYVNVLGEMHPQGWSYSYNDEVGA---------LDHILISPSLSKRVVDATEWHINA 811

Query: 242 -------DTKPRGWTKP--------SDHTPVIVSLDI 263
                           P        SDH P ++ L++
Sbjct: 812 AESTLFDYNDEYKGDLPKYQDHYRSSDHDPAVIDLNM 848


>gi|50285291|ref|XP_445074.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49524377|emb|CAG57974.1| unnamed protein product [Candida glabrata]
          Length = 471

 Score = 40.2 bits (92), Expect = 0.31,   Method: Composition-based stats.
 Identities = 24/94 (25%), Positives = 34/94 (36%), Gaps = 2/94 (2%)

Query: 17  RIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYH-IETCGQKSYNGVAILSKY 74
           R   L   IK  N DI CLQE    +   F  E L    Y  I        +GV I  K 
Sbjct: 110 RSKVLLHEIKHYNADICCLQEIDDVQYDLFWSEELPKFGYKTIYFHQDSKSHGVMIAWKE 169

Query: 75  QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108
           +  ++ +H+  +        I+     N   L +
Sbjct: 170 ELFQLESHMNIEFDKEAPAGIQPRTRTNNVGLLV 203


>gi|326319964|ref|NP_001191852.1| protein angel [Acyrthosiphon pisum]
 gi|328726434|ref|XP_003248895.1| PREDICTED: LOW QUALITY PROTEIN: protein angel homolog 2-like
           [Acyrthosiphon pisum]
          Length = 438

 Score = 40.2 bits (92), Expect = 0.31,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 57/205 (27%), Gaps = 8/205 (3%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQP 76
           R   L   IK+ N DIIC QE +    N+ F+ L  L Y+     +  ++       Y+ 
Sbjct: 99  RRQLLLKEIKQFNADIICFQEVQESHLNWFFKKLSDLGYNGVYKKRTRFHCDGCAIYYRN 158

Query: 77  IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
            +            Q              LR+        N I ST +            
Sbjct: 159 DKFTLKEKVTVEYNQPGINVLDRDNVGIVLRLSPRKNEAENIIVSTTHILYNKKRHDIKL 218

Query: 137 FASQRLELEEPLIFAGDYNIIPQPH-DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAI 195
                L  E   +    +  +   +   Y+PII   D             +    F   +
Sbjct: 219 AQVHLLLAEIERVAYKGHKKVGDDNIPEYHPIILTGDFNLEPNTAVYDFLINGALFYSNL 278

Query: 196 RATHDTHHLYSFWDYYADSWSKNKG 220
           +         + W     S   N G
Sbjct: 279 QKP-------TLWSQNNQSGRCNMG 296


>gi|260574139|ref|ZP_05842144.1| conserved hypothetical protein [Rhodobacter sp. SW2]
 gi|259023605|gb|EEW26896.1| conserved hypothetical protein [Rhodobacter sp. SW2]
          Length = 316

 Score = 40.2 bits (92), Expect = 0.31,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 20/67 (29%)

Query: 209 DYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD-----------HTPV 257
           DY AD+     G+R+D+I+ S + T  +  + +      W   SD           H PV
Sbjct: 259 DYTADAGPG--GLRVDYILPSVDLT--VTGSGVL-----WPPESDPLAATLAAASRHRPV 309

Query: 258 IVSLDIP 264
            V +++P
Sbjct: 310 WVEINLP 316


>gi|145348823|ref|XP_001418843.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144579073|gb|ABO97136.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 325

 Score = 40.2 bits (92), Expect = 0.31,   Method: Composition-based stats.
 Identities = 33/284 (11%), Positives = 68/284 (23%), Gaps = 49/284 (17%)

Query: 4   VTVATWNVN-SIRA---RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
           + + T+NV     A   R+  L   I+  +  ++CLQE  T    F    L++  +    
Sbjct: 44  LRLLTYNVWFGDVAQAERLEALGKVIETCDAHVVCLQEV-TPQALF---VLRAQPWWDAY 99

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
                       S      +V             F  +        +             
Sbjct: 100 VVGPKPPLQEYFSMMLFKRVVRSEVLKRDQY--AFRNSQMGRYLDVVSHMRCPSSRATFA 157

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
             T + +      R           E        +    +         W++        
Sbjct: 158 LGTSHLESYISASRTSARERAVQMSE-----CFSWLNQHENAIFMGDTNWDDKDGAVPLP 212

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK-GIRIDHIMLSPEAT----S 234
                                    +++ D   ++  +     R+D   +  +       
Sbjct: 213 DGWRDAWLEAR---------PGDPGFTY-DARKNAMLRGYLQKRLDRAFV--KLKHFDVK 260

Query: 235 LLHSARIDTKP----------RGWTK-------PSDHTPVIVSL 261
            +     D  P          RG  +       PSDH  ++++L
Sbjct: 261 RVEMVGTDPIPGVTYHKTVSNRGKAQILELPVVPSDHFGLLLTL 304


>gi|120556472|ref|YP_960823.1| endonuclease/exonuclease/phosphatase [Marinobacter aquaeolei VT8]
 gi|120326321|gb|ABM20636.1| Endonuclease/exonuclease/phosphatase [Marinobacter aquaeolei VT8]
          Length = 286

 Score = 40.2 bits (92), Expect = 0.31,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 23/48 (47%), Gaps = 11/48 (22%)

Query: 221 IR----IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
            R    +DHI++SP     +  + + + P      SDH P+ + + +P
Sbjct: 239 WRPEKALDHILVSPSLE--IRRSEVVSYP-----VSDHLPIAMDVALP 279


>gi|302846967|ref|XP_002955019.1| hypothetical protein VOLCADRAFT_106614 [Volvox carteri f.
           nagariensis]
 gi|300259782|gb|EFJ44007.1| hypothetical protein VOLCADRAFT_106614 [Volvox carteri f.
           nagariensis]
          Length = 831

 Score = 40.2 bits (92), Expect = 0.31,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 1/44 (2%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDK-NFPFETLQSLNYHIET 59
           R  NL   +  +  DI+CLQE +++   +F    LQ   Y    
Sbjct: 251 RKRNLLRELLSHKADILCLQEVQSDHYLDFWAPELQRAGYVAIY 294


>gi|68487904|ref|XP_712169.1| potential phospholipase C/sphingomyelinase Isc1p [Candida albicans
           SC5314]
 gi|46433540|gb|EAK92976.1| potential phospholipase C/sphingomyelinase Isc1p [Candida albicans
           SC5314]
          Length = 438

 Score = 40.2 bits (92), Expect = 0.31,   Method: Composition-based stats.
 Identities = 37/302 (12%), Positives = 84/302 (27%), Gaps = 38/302 (12%)

Query: 4   VTVATWNVNSIR-------ARIHNLAAWIK-----ENNPDIICLQETKTEDKNFPFETLQ 51
           + + T+N   ++        R+  +A  +      + + DI+ LQE   E+     + + 
Sbjct: 20  IKLLTFNTWGLKFISKHRKERLRAIADALANPKSPDEDYDIVALQEIWCEEDWQYLDLVC 79

Query: 52  SLNY---HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108
              Y    +   G  S  G+A+LSK    E   +    +    A F    +   +  + +
Sbjct: 80  RPRYPYRRVFKAGIVSGPGLAVLSKIFIAETFLYRFPINGRPSAFFRGDFYVGKSIAVTM 139

Query: 109 GN--------------LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDY 154
                                     ++    +      F +      +    +I  GD 
Sbjct: 140 FQPHHPDILPIALLNSHMHAPYGSGDASYSTHRACQAWDFAKLVRMLKKAGYAVIQVGDL 199

Query: 155 NIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADS 214
           N  P         +          + +      +   T ++        + +        
Sbjct: 200 NSKPDSLPYKLFTVEGGLTDSWNVLNKDNVVPNDQIATLSLEDQISLAGV-TCNSRLNTW 258

Query: 215 WSKNKGI---RIDHIMLSPE----ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPR 267
                     R+D+ ++        ++ +        P   +  SDH    V L I    
Sbjct: 259 RESRPLWEACRLDYALIDASNITPVSAQVKFVDKLPPPLSCSY-SDHFAYSVDLVIRPKE 317

Query: 268 KK 269
           ++
Sbjct: 318 ER 319


>gi|324993637|gb|EGC25556.1| RgfB protein [Streptococcus sanguinis SK405]
          Length = 271

 Score = 40.2 bits (92), Expect = 0.32,   Method: Composition-based stats.
 Identities = 27/244 (11%), Positives = 64/244 (26%), Gaps = 9/244 (3%)

Query: 18  IHNLAAWIKENNPDIICLQETK--TEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75
           ++ L   I +   D+ICLQE    TE +                  Q  +    +    +
Sbjct: 21  LNQLVERILQEKYDVICLQEVNQLTESEQVVQAPFYQAVEGAIAIHQDHFALCLVEKLAE 80

Query: 76  PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135
                      +      + E    ++ + L    + +   N  T       +       
Sbjct: 81  AGLDYHWSWAYNHIGFDIYNEGVAILSRKPLTPREVLVSEANDPTDYHTRKVLLAETEVD 140

Query: 136 RF---ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN--MG 190
                 +          F G++  + +        +           +Q +Q +    + 
Sbjct: 141 GQLLTIASCHLSWWDKGFQGEWAKLEEELLKVKTPLVLMGDFNNPVGQQGYQTILASPLK 200

Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
             D+     +     +     A        ++ID++  S      +  + +    +    
Sbjct: 201 LQDSHAVAREAIGEATVEGTIAGWDDNKHALKIDYVFTSQGMD--VERSAVVFDGKETPV 258

Query: 251 PSDH 254
            SDH
Sbjct: 259 VSDH 262


>gi|239790439|dbj|BAH71781.1| ACYPI000743 [Acyrthosiphon pisum]
          Length = 438

 Score = 40.2 bits (92), Expect = 0.32,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 57/205 (27%), Gaps = 8/205 (3%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQP 76
           R   L   IK+ N DIIC QE +    N+ F+ L  L Y+     +  ++       Y+ 
Sbjct: 99  RRQLLLKEIKQFNADIICFQEVQESHLNWFFKKLSDLGYNGVYKKRTRFHCDGCAIYYRN 158

Query: 77  IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
            +            Q              LR+        N I ST +            
Sbjct: 159 DKFTLKEKVTVGYNQPGINVLDRDNVGIVLRLSPRKNEAENIIVSTTHILYNKKRHDIKL 218

Query: 137 FASQRLELEEPLIFAGDYNIIPQPH-DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAI 195
                L  E   +    +  +   +   Y+PII   D             +    F   +
Sbjct: 219 AQVHLLLAEIERVAYKGHKKVGDDNIPEYHPIILTGDFNLEPNTAVYDFLINGALFYSNL 278

Query: 196 RATHDTHHLYSFWDYYADSWSKNKG 220
           +         + W     S   N G
Sbjct: 279 QKP-------TLWSQNNQSGRCNMG 296


>gi|169787282|gb|ACA80080.1| putative DNA lyase [Glomerella tucumanensis]
          Length = 233

 Score = 40.2 bits (92), Expect = 0.32,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 22/57 (38%)

Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81
           +    DI+ +QETK + K+   + +    + +     K   G + ++ Y       
Sbjct: 2  FEILEADIVVMQETKVQRKDLHDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATCC 58


>gi|13940623|gb|AAK50425.1|AC021891_26 Hypothetical protein [Oryza sativa Japonica Group]
          Length = 250

 Score = 40.2 bits (92), Expect = 0.32,   Method: Composition-based stats.
 Identities = 18/116 (15%), Positives = 32/116 (27%), Gaps = 11/116 (9%)

Query: 2   SVVTVATWNVNSIR------ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55
               + T+NV  IR       R+  L   I+ +NPD IC Q       N   E ++ L  
Sbjct: 139 KTFKIMTYNVW-IREDIELHRRLGALGDLIQLHNPDFICFQ----VPGNKENEKIEPLPV 193

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
            +     +             + +           +      T     +   +   
Sbjct: 194 VVLHPPARGLPPNLEAKLAGRVRMRPGQSWTAACAKLVARRCTPPRYGEPFPVPTH 249


>gi|328853940|gb|EGG03075.1| hypothetical protein MELLADRAFT_109522 [Melampsora larici-populina
           98AG31]
          Length = 267

 Score = 40.2 bits (92), Expect = 0.32,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 33/105 (31%), Gaps = 17/105 (16%)

Query: 1   MSVVTVATWNV-----NS--------IRARIHNLAAWIKENNPDIICLQETKTEDKNF-- 45
           +S++ +AT+N+     NS           R+  +   +    PDII  QE    D  F  
Sbjct: 7   LSILKLATYNIRYSPTNSHPILPEAPWSTRLPLILNQLNWEEPDIIGAQEV--LDHQFID 64

Query: 46  PFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDV 90
             E L  L Y     G+     +   +          L       
Sbjct: 65  LLEGLHQLGYTGIGVGRDDGKRLGEYAPIFWKSDQFELVDHHYFW 109


>gi|295425006|ref|ZP_06817715.1| conserved hypothetical protein [Lactobacillus amylolyticus DSM
           11664]
 gi|295065324|gb|EFG56223.1| conserved hypothetical protein [Lactobacillus amylolyticus DSM
           11664]
          Length = 367

 Score = 40.2 bits (92), Expect = 0.32,   Method: Composition-based stats.
 Identities = 37/273 (13%), Positives = 70/273 (25%), Gaps = 29/273 (10%)

Query: 13  SIRARIHNLAAWIKENNPDIICLQETKTEDK--------NFPFETLQSL------NYHIE 58
           S+ A    +   +K+ NPD +  QE  T           N      ++       N+H  
Sbjct: 101 SVLASTDGVIKTMKKQNPDFMLFQEIDTHSTRSHYVNQVNLVEHAFKNYDHVFANNFHSA 160

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPG--DDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                 Y+    +          H+          +    + FT   +   + +  +  G
Sbjct: 161 YLAWPLYDPHGSVQSGLLSMSKYHMQSAVRRKYPVSSAFISKFTDLDRCFTVMHYPIKGG 220

Query: 117 NP---ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
                I S           R  +       +E     AG+Y I+    +           
Sbjct: 221 KELIVINSHMSAYDKGGKMRKAQMKILSKVIEAEYK-AGNYVIVGGDFNHALGRDMLTHF 279

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSP 230
               ++      L               +   + +          K N     D  ++S 
Sbjct: 280 DHQEKIPSWVSVLDQKMLPKDFIMVKATNRERVATVRSTDMKYRPKVNYQTVGDGFIISK 339

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              +      I+T  R      DH PV +   +
Sbjct: 340 NIKAKATD--INTDYRYA----DHNPVRLGFSL 366


>gi|242079219|ref|XP_002444378.1| hypothetical protein SORBIDRAFT_07g021012 [Sorghum bicolor]
 gi|241940728|gb|EES13873.1| hypothetical protein SORBIDRAFT_07g021012 [Sorghum bicolor]
          Length = 397

 Score = 40.2 bits (92), Expect = 0.32,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 35/102 (34%), Gaps = 7/102 (6%)

Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
              +    +   +           + +     ++ +Y++ +             ID +  
Sbjct: 67  CCKEKNNGVVNVKWVDLFNEWINRNGLIELKPSNRVYTWTNNKKQPIMAA----IDKVFC 122

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQ 270
           S         A + T+ RG    SDH P+I++L+  E +K  
Sbjct: 123 SSNFEQKFPLAFVSTRARG---HSDHVPLILNLNCSERKKPS 161


>gi|218197223|gb|EEC79650.1| hypothetical protein OsI_20886 [Oryza sativa Indica Group]
          Length = 835

 Score = 40.2 bits (92), Expect = 0.32,   Method: Composition-based stats.
 Identities = 10/67 (14%), Positives = 27/67 (40%), Gaps = 5/67 (7%)

Query: 204 LYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            Y++ +        N  +R+D  +       +  S++++      +  SDH PV++   +
Sbjct: 400 PYTYDNKREG--INNVRVRLDRAVADDGWRDMFRSSQVEHLI---SPCSDHCPVVLKFCV 454

Query: 264 PEPRKKQ 270
              +  +
Sbjct: 455 DTNQPAR 461


>gi|154286664|ref|XP_001544127.1| hypothetical protein HCAG_01173 [Ajellomyces capsulatus NAm1]
 gi|150407768|gb|EDN03309.1| hypothetical protein HCAG_01173 [Ajellomyces capsulatus NAm1]
          Length = 616

 Score = 40.2 bits (92), Expect = 0.32,   Method: Composition-based stats.
 Identities = 30/241 (12%), Positives = 55/241 (22%), Gaps = 32/241 (13%)

Query: 22  AAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81
            A       DI+  QETK + K+   + +    +       K             I    
Sbjct: 1   MAMFDALEADIVIFQETKIQRKDLQDDMVLVNGWDCFFSLPK------YKKGPNSICCPI 54

Query: 82  HLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQR 141
                   +       +   +  + R        G            +         +  
Sbjct: 55  RAEEGITGILCLPTSGSNLSSPTSFRDLPEEAQIGG--------YPTAEQLALSDVDAAT 106

Query: 142 LELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT 201
           L+ E   +       +     C        D   T  V     +++N+            
Sbjct: 107 LDSEGRCMILEFPAFVLIGVYCPANRDETRDGFRTGFVNVLDARVRNLATMGKRVIVMGD 166

Query: 202 HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
            ++               G +ID    S  A   +    +       +  SDH PV   L
Sbjct: 167 LNI--------------SGSQID----SARALEGIRKGTLTDSEFVSSPGSDHCPVFAEL 208

Query: 262 D 262
            
Sbjct: 209 K 209


>gi|262166640|ref|ZP_06034377.1| extracellular nuclease-related protein [Vibrio mimicus VM223]
 gi|262026356|gb|EEY45024.1| extracellular nuclease-related protein [Vibrio mimicus VM223]
          Length = 734

 Score = 40.2 bits (92), Expect = 0.33,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 29/77 (37%), Gaps = 26/77 (33%)

Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT------------------ 249
           W Y   S++   G  +DH+++SP   + +  A  D    G                    
Sbjct: 640 WSY---SFNDEVGA-LDHLLVSPSLKTKVVDAT-DWHINGAESTLFDYNDEFKGNLPKYN 694

Query: 250 ---KPSDHTPVIVSLDI 263
              + SDH P ++ L+I
Sbjct: 695 DQFRASDHDPAVLELNI 711


>gi|258620504|ref|ZP_05715542.1| Nuclease-related protein [Vibrio mimicus VM573]
 gi|258587383|gb|EEW12094.1| Nuclease-related protein [Vibrio mimicus VM573]
          Length = 869

 Score = 40.2 bits (92), Expect = 0.33,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 29/77 (37%), Gaps = 26/77 (33%)

Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT------------------ 249
           W Y   S++   G  +DH+++SP   + +  A  D    G                    
Sbjct: 775 WSY---SFNDEVGA-LDHLLVSPSLKTKVVDAT-DWHINGAESTLFDYNDEFKGNLPKYN 829

Query: 250 ---KPSDHTPVIVSLDI 263
              + SDH P ++ L+I
Sbjct: 830 DQFRASDHDPAVLELNI 846


>gi|254486542|ref|ZP_05099747.1| endonuclease/exonuclease/phosphatase family protein [Roseobacter
           sp. GAI101]
 gi|214043411|gb|EEB84049.1| endonuclease/exonuclease/phosphatase family protein [Roseobacter
           sp. GAI101]
          Length = 341

 Score = 40.2 bits (92), Expect = 0.33,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 19/52 (36%), Gaps = 12/52 (23%)

Query: 223 IDHIMLSPEATSLLH-----------SARIDTKPRG-WTKPSDHTPVIVSLD 262
           +D+IM+SP+ T                   D   R      SDH PV +  D
Sbjct: 289 LDYIMVSPQFTDNNARWRIWHPLDDPECWADADLRDALVTASDHFPVTIEFD 340


>gi|189463755|ref|ZP_03012540.1| hypothetical protein BACINT_00088 [Bacteroides intestinalis DSM
           17393]
 gi|189438705|gb|EDV07690.1| hypothetical protein BACINT_00088 [Bacteroides intestinalis DSM
           17393]
          Length = 516

 Score = 40.2 bits (92), Expect = 0.33,   Method: Composition-based stats.
 Identities = 19/135 (14%), Positives = 36/135 (26%), Gaps = 9/135 (6%)

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
               +           +  +  +     L    D  I        + +I EN      E+
Sbjct: 144 DWLHHFPVAMCAMENGKHVAIEVPSAMNLQECWDL-INMSEKTRKHCMILENCCYDWFEM 202

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWD-YYADSWSKNKGIRIDH-------IMLSPE 231
                  Q +            H L  FWD Y+ +  +   G R+D+       +  +  
Sbjct: 203 NTLNMAQQGVFGEVIRGQGAYIHELSPFWDHYWKNGENDKLGWRLDYNKKHRGDVYATHG 262

Query: 232 ATSLLHSARIDTKPR 246
              +  +  I    R
Sbjct: 263 LGPVAQAFDIHRGDR 277


>gi|159487996|ref|XP_001702008.1| protein of endonuclease / exonuclease / phosphatase family
           [Chlamydomonas reinhardtii]
 gi|158271465|gb|EDO97283.1| protein of endonuclease / exonuclease / phosphatase family
           [Chlamydomonas reinhardtii]
          Length = 573

 Score = 40.2 bits (92), Expect = 0.33,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 1/44 (2%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDK-NFPFETLQSLNYHIET 59
           R  NL   +  +  DI+CLQE +++   +F    LQ   Y    
Sbjct: 250 RKRNLLRELLAHKADILCLQEVQSDHYVDFWAPELQRAGYVAIY 293


>gi|153808285|ref|ZP_01960953.1| hypothetical protein BACCAC_02573 [Bacteroides caccae ATCC 43185]
 gi|149129188|gb|EDM20404.1| hypothetical protein BACCAC_02573 [Bacteroides caccae ATCC 43185]
          Length = 673

 Score = 40.2 bits (92), Expect = 0.33,   Method: Composition-based stats.
 Identities = 33/285 (11%), Positives = 71/285 (24%), Gaps = 42/285 (14%)

Query: 4   VTVATWNV---------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           + V  WN+         +        +   IK++  D++ +QE     +           
Sbjct: 405 LKVLQWNIWHGGKHLGKDG----RERIIDLIKQSGADVVTMQEGYGSQEMIAKAI----- 455

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
                      + + + S+Y   +I T                      + + +   +L 
Sbjct: 456 -GFNLQTPSPGDNLCLFSRYPIQKIKTKNTFYSNPAIITLPS------GKKVYLNACWLR 508

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI-IWENDA 173
           +      T Y                 L L +      +  I          I    N  
Sbjct: 509 YAYRPEYTCYYANYGMDTHRWAAEDSILALVDMKRLLENDLIPYVDSSMPVIIGGDFNSC 568

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY--SFWDYYADSWSKNKG----------- 220
                  ++          +   + +     +  +F +   D   + +G           
Sbjct: 569 SHLDWTHKAAPIHFGYIAEELPVSRYMLDKGFRDTFREINPDELERGEGTYAVIYGQSQT 628

Query: 221 IRIDHIMLSPEATSLLHSARIDTK--PRGWTKPSDHTPVIVSLDI 263
            RID I  S        +++I           P DH  V+   ++
Sbjct: 629 SRIDFIY-SKGNGIKTVASKIVRTMPEIDDVWPGDHAAVLTVFEL 672


>gi|299145012|ref|ZP_07038080.1| putative endonuclease/exonuclease/phosphatase family protein
           [Bacteroides sp. 3_1_23]
 gi|298515503|gb|EFI39384.1| putative endonuclease/exonuclease/phosphatase family protein
           [Bacteroides sp. 3_1_23]
          Length = 277

 Score = 40.2 bits (92), Expect = 0.33,   Method: Composition-based stats.
 Identities = 32/274 (11%), Positives = 65/274 (23%), Gaps = 44/274 (16%)

Query: 3   VVTVATWNVNSIRAR------IHNLAAWIKENNPDIICLQE----T-KTEDKNFPFETLQ 51
           +V V ++N+ S +        +  +A  IK+ NPD+  LQE    T K E  +      +
Sbjct: 37  LVKVMSYNIYSGQKAYSGKKGMEAIAQVIKKINPDLAGLQEFETKTNKVEKADIIALMKE 96

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
                           V        I     +  +      R              +   
Sbjct: 97  VTGMPYAFF--VKTRDVDGGEYGNLILSKYPISDEVNYDLPRIETVEDVYPRSMGVVKTE 154

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
               G     T      +   R  +  +   + +                   +     +
Sbjct: 155 KDGKGFYFGVTHLSHVGNETNRINQTTTIIEKTKGLDK---------PMILTGDFNALAD 205

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
                +   +      N  +                               ID ++ +P+
Sbjct: 206 SGPMKILYERFEIGCLNGNYGLTTGTPVPVKA-------------------IDFVLYTPD 246

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
                 +  +          SDH PV+ +  I +
Sbjct: 247 DGMSPKAYDVYYDAYVE---SDHFPVVATFSIND 277


>gi|147859622|emb|CAN83120.1| hypothetical protein VITISV_043394 [Vitis vinifera]
          Length = 1596

 Score = 40.2 bits (92), Expect = 0.33,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 22/56 (39%), Gaps = 7/56 (12%)

Query: 205 YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
           +++    +  +      R+D  M+SP       +    T+ R      DH P+I+ 
Sbjct: 712 FTW----SGGFQNQAWARLDRFMVSPSWLDQFRNV---TQKRLSRPILDHFPIIIE 760


>gi|315037288|ref|YP_004030856.1| hypothetical protein LA2_00290 [Lactobacillus amylovorus GRL 1112]
 gi|312275421|gb|ADQ58061.1| hypothetical protein LA2_00290 [Lactobacillus amylovorus GRL 1112]
          Length = 367

 Score = 40.2 bits (92), Expect = 0.34,   Method: Composition-based stats.
 Identities = 37/273 (13%), Positives = 70/273 (25%), Gaps = 29/273 (10%)

Query: 13  SIRARIHNLAAWIKENNPDIICLQETKTEDK--------NFPFETLQSL------NYHIE 58
           S+ A    +   +K+ NPD +  QE  T           N      ++       N+H  
Sbjct: 101 SVLASTDGVIKTMKKQNPDFMLFQEIDTHSTRSHYVNQVNLVEHAFKNYDHVFANNFHSA 160

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPG--DDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                 Y+    +          H+          +    + FT   +   + +  +  G
Sbjct: 161 YLAWPLYDPHGSVQSGLLSMSKYHMQSAVRRKYPVSSAFISKFTDLDRCFTVMHYPIKGG 220

Query: 117 NP---ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
                I S           R  +       +E     AG+Y I+    +           
Sbjct: 221 KELIVINSHMSAYDKGGKMRKAQMKILSKVIEAEYK-AGNYVIVGGDFNHALGRDMLTHF 279

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSP 230
               ++      L               +   + +          K N     D  ++S 
Sbjct: 280 DHQEKIPSWVSVLDQKMLPKDFIMVKATNRERVATVRSTDMKYRPKVNYQTVGDGFIISK 339

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              +      I+T  R      DH PV +   +
Sbjct: 340 NIKAKATD--INTDYRYA----DHNPVRLGFSL 366


>gi|307167078|gb|EFN60867.1| RNA-directed DNA polymerase from mobile element jockey
          [Camponotus floridanus]
          Length = 71

 Score = 40.2 bits (92), Expect = 0.34,   Method: Composition-based stats.
 Identities = 9/37 (24%), Positives = 20/37 (54%)

Query: 3  VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETK 39
           + +A+WN N +   I  +  +I+  + D++ + ET 
Sbjct: 1  TLKIASWNANRLNQHIQEVKTFIQNQDLDLLLISETH 37


>gi|147826521|emb|CAN72914.1| hypothetical protein VITISV_034007 [Vitis vinifera]
          Length = 1586

 Score = 40.2 bits (92), Expect = 0.34,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 4/40 (10%)

Query: 4  VTV--ATWNVNSIRARIHN--LAAWIKENNPDIICLQETK 39
          + +   +WNV           + A IK+N  D++CL ETK
Sbjct: 1  MKIRLLSWNVRGANNCDKRKVIKALIKKNRVDLVCLXETK 40


>gi|167587986|ref|ZP_02380374.1| Endonuclease/exonuclease/phosphatase [Burkholderia ubonensis Bu]
          Length = 253

 Score = 40.2 bits (92), Expect = 0.34,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 17/46 (36%), Gaps = 17/46 (36%)

Query: 4  VTVATWNVNSIRARIHNLAAW-----------IKENNPDIICLQET 38
          + +AT+N+            W           I E + D+I LQE 
Sbjct: 19 LRIATYNIRG------GFGIWHAAAADRIAAVIDELDADVIALQEV 58



 Score = 40.2 bits (92), Expect = 0.39,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 3/45 (6%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPR 267
           +D I + P    LL    +    R   + SDH P++  + +P P 
Sbjct: 206 LDRIWIHPG--ELLIDVAVHRSARAR-RASDHYPLVARMRVPAPP 247


>gi|163793638|ref|ZP_02187613.1| Endonuclease/exonuclease/phosphatase [alpha proteobacterium
          BAL199]
 gi|159181440|gb|EDP65955.1| Endonuclease/exonuclease/phosphatase [alpha proteobacterium
          BAL199]
          Length = 258

 Score = 40.2 bits (92), Expect = 0.34,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 20/48 (41%), Gaps = 15/48 (31%)

Query: 1  MSVVTVATWNVNSI----------RARIHNLAAWIKENNPDIICLQET 38
          M+ V V TWN++            R R       I + +PDI  +QE 
Sbjct: 1  MNSVRVLTWNIHGFLGQDGGFDPERVR-----RIIADLSPDIAAIQEV 43


>gi|156386625|ref|XP_001634012.1| predicted protein [Nematostella vectensis]
 gi|156221090|gb|EDO41949.1| predicted protein [Nematostella vectensis]
          Length = 244

 Score = 40.2 bits (92), Expect = 0.34,   Method: Composition-based stats.
 Identities = 37/258 (14%), Positives = 77/258 (29%), Gaps = 28/258 (10%)

Query: 2   SVVTVATWNVNSIR-----ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56
           + + + TWNV   R     ++   +   I++   DI+ + E +        + + +    
Sbjct: 9   TKIRLGTWNV---RTMYETSKAAQVLNEIEKYQLDILGISECRWTGSG---KQVTNNGSA 62

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
           I   G    +      +   I     L                  N++  ++  L     
Sbjct: 63  IIWSGHPHRHE----REVAIIVSKAKLKTLLEWEPISDRLIRARFNSKHSKLTILQCYAE 118

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
                  Y++    + R  R     +  +     A D     +  + +   +  ++    
Sbjct: 119 EEDKDEWYEELQVAVPRVPRHDLLLIMGDINAKAASDNTNFERAMEKHGCGVMNDNGRRF 178

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
            E         N          H   H  ++     D  +KN+   IDH+ ++ +    L
Sbjct: 179 AEFCLK-----NNCIIGGTIFPHKNLHKVTWNS--PDGHTKNQ---IDHVAINGKWRRSL 228

Query: 237 HSARIDTKPRGWTKPSDH 254
              R+    RG    SDH
Sbjct: 229 QDVRVY---RGADVYSDH 243


>gi|315635841|ref|ZP_07891103.1| endonuclease/exonuclease/phosphatase [Arcobacter butzleri JV22]
 gi|315479820|gb|EFU70491.1| endonuclease/exonuclease/phosphatase [Arcobacter butzleri JV22]
          Length = 313

 Score = 40.2 bits (92), Expect = 0.34,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 6/46 (13%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPR-----GWTKPSDHTPVIVSLDI 263
           +D+I +S E    + S  +  K       G  K SDH  V+  ++I
Sbjct: 269 LDYIFVSKEL-QKISSYEVLDKHLQKNHNGSLKQSDHAQVVCEIEI 313


>gi|323344203|ref|ZP_08084429.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           oralis ATCC 33269]
 gi|323094932|gb|EFZ37507.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           oralis ATCC 33269]
          Length = 317

 Score = 40.2 bits (92), Expect = 0.34,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 20/62 (32%), Gaps = 21/62 (33%)

Query: 223 IDHIMLSPEATSLLHSARIDTKP--------RGWTKP-------------SDHTPVIVSL 261
           +DHI+   +    L   RI   P         G  +P             SDH P++   
Sbjct: 252 LDHILADEDLADSLVECRIHDAPFLLTDDKTYGGKQPFRTYIGPKYQQGFSDHLPLVARF 311

Query: 262 DI 263
            I
Sbjct: 312 RI 313


>gi|325955766|ref|YP_004286376.1| hypothetical protein LAC30SC_00225 [Lactobacillus acidophilus 30SC]
 gi|325332331|gb|ADZ06239.1| hypothetical protein LAC30SC_00225 [Lactobacillus acidophilus 30SC]
          Length = 367

 Score = 40.2 bits (92), Expect = 0.34,   Method: Composition-based stats.
 Identities = 37/273 (13%), Positives = 70/273 (25%), Gaps = 29/273 (10%)

Query: 13  SIRARIHNLAAWIKENNPDIICLQETKTEDK--------NFPFETLQSL------NYHIE 58
           S+ A    +   +K+ NPD +  QE  T           N      ++       N+H  
Sbjct: 101 SVLASTDGVIKTMKKQNPDFMLFQEIDTHSTRSHYVNQVNLVEHAFKNYDHVFANNFHSA 160

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPG--DDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                 Y+    +          H+          +    + FT   +   + +  +  G
Sbjct: 161 YLAWPLYDPHGSVQSGLLSMSKYHMQSAVRRKYPVSSAFISKFTDLDRCFTVMHYPIKGG 220

Query: 117 NP---ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
                I S           R  +       +E     AG+Y I+    +           
Sbjct: 221 KELIVINSHMSAYDKGGKMRKAQMKILSKVIEAEYK-AGNYVIVGGDFNHALGRDMLTHF 279

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSP 230
               ++      L               +   + +          K N     D  ++S 
Sbjct: 280 DHQEKIPSWVSVLDQKMLPKDFIMVKATNRERVATVRSTDMKYRPKVNYQTVGDGFIISK 339

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              +      I+T  R      DH PV +   +
Sbjct: 340 NIKAKATD--INTDYRYA----DHNPVRLGFSL 366


>gi|325690925|gb|EGD32925.1| RgfB protein [Streptococcus sanguinis SK115]
          Length = 271

 Score = 40.2 bits (92), Expect = 0.35,   Method: Composition-based stats.
 Identities = 28/254 (11%), Positives = 63/254 (24%), Gaps = 29/254 (11%)

Query: 18  IHNLAAWIKENNPDIICLQETK--TEDKNFPFETLQSLNYHIETCGQKSYNGVAILS--- 72
           ++ LA  I +   D+ICLQE    TE +           Y       + +     L    
Sbjct: 21  LNQLAERILQEKYDVICLQEVNQLTESEQVVQAPF----YQAVEGAIEIHQDHFALCLVE 76

Query: 73  ------KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDD 126
                          +  G D+  +   I +   +  + + +     P           +
Sbjct: 77  KLAEAGLDYHWSWAYNHIGFDIYNEGVAILSRKPLAPREVLVSEANDPRDYHTRKVLLAE 136

Query: 127 KISWIK------RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
                +        L +  +  + E   + A             +         +   + 
Sbjct: 137 TEVEGQLLTIASCHLSWWDKGFQGEWAKLEAELLKAETPLVLMGDFNNPVGQQGYQTILA 196

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
              +   +                 + WD           ++ID++  S      +  + 
Sbjct: 197 SPLKLQDSHTAAKEAIGEATVEGTIAGWD------DNKHALKIDYVFTSQGMD--VERSA 248

Query: 241 IDTKPRGWTKPSDH 254
           +    +     SDH
Sbjct: 249 VVFDGKETPVVSDH 262


>gi|220933285|ref|YP_002512184.1| Endonuclease/exonuclease/phosphatase [Thioalkalivibrio sp.
           HL-EbGR7]
 gi|219994595|gb|ACL71197.1| Endonuclease/exonuclease/phosphatase [Thioalkalivibrio sp.
           HL-EbGR7]
          Length = 294

 Score = 40.2 bits (92), Expect = 0.35,   Method: Composition-based stats.
 Identities = 38/286 (13%), Positives = 80/286 (27%), Gaps = 65/286 (22%)

Query: 4   VTVATWNVN-SIRA-RIHN---------------------LAAWIKENNPDIICLQETKT 40
           + V ++NV   I A R H+                     +A +I  +  D++ LQE   
Sbjct: 40  IRVLSYNVQVGISATRFHHYFTNSWKHVLPYQGRLGNLDSVARFI--SGFDLVGLQE--L 95

Query: 41  EDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT 100
           +  +   + +    Y  E      +      +  +  +    L                 
Sbjct: 96  DAGSLRSQFINLAQYLSERSDLPYWYSQTNRNLGKIAQHSLGLLSRYHPHTVVEHRLPSV 155

Query: 101 INTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP 160
           I  +     +     G+              +          E             + + 
Sbjct: 156 IPGRGALEAHFGAEQGSGSLVIMLVHLSLGKRDRRLQMEYIAE-------------VLRD 202

Query: 161 HDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYY-ADSWSKNK 219
           H+    +   N +C   EV++  ++          R         ++  +  A ++    
Sbjct: 203 HEHVVVMGDMNCSCHADEVKRLVRQT---------RLQEPLAAHKTYPSWRPAHAF---- 249

Query: 220 GIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
               DHI+++P     +    +          SDH PV V + +PE
Sbjct: 250 ----DHILVTPGLG--VEQVHVYN-----VNYSDHLPVGVEIVVPE 284


>gi|147805881|emb|CAN76026.1| hypothetical protein VITISV_027817 [Vitis vinifera]
          Length = 1728

 Score = 40.2 bits (92), Expect = 0.35,   Method: Composition-based stats.
 Identities = 30/244 (12%), Positives = 71/244 (29%), Gaps = 30/244 (12%)

Query: 18  IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPI 77
              +   ++    D++CL ETK +D                +    +  GV     +  +
Sbjct: 100 RKLIKGVVRNQKADLVCLLETKVKD---------------VSTQLVNSVGVGRFLNWASV 144

Query: 78  EIVTHLPGDDLDVQARFIEA-TFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
           +      G  L    R +E         ++ +       G       +    S +   + 
Sbjct: 145 DARGTAGGLLLIWDNRVLENLEVESGGYSISVRFRNCSDG-------FSWIFSGVYGPVI 197

Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIR 196
            + +    EE     G +         +N + +  +      +    ++   +     +R
Sbjct: 198 GSEKEDFWEELGAIRGLWEDPWCIGGDFNAVRYPEERRNAPRLTADMRRFSEVIGELGLR 257

Query: 197 ATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTP 256
                   +++        +     R+D  ++S +      +      PR     SDH P
Sbjct: 258 DIPLAGGPFTW----IGGLNSQAASRLDRFLISDQWEDHFSAISQSALPR---LVSDHXP 310

Query: 257 VIVS 260
           +I+ 
Sbjct: 311 IILE 314


>gi|327313721|ref|YP_004329158.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           denticola F0289]
 gi|326945022|gb|AEA20907.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           denticola F0289]
          Length = 371

 Score = 40.2 bits (92), Expect = 0.35,   Method: Composition-based stats.
 Identities = 26/256 (10%), Positives = 57/256 (22%), Gaps = 44/256 (17%)

Query: 30  PDIICLQETKTEDKNFPFET-----LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLP 84
           PDI+ L E   E+ +  F+      L+   Y           G+ +   Y P        
Sbjct: 129 PDIVGLCEV--ENDSVLFDLTRRSLLRKARYEYVMTASDDRRGIDVALLYSPFSFRLIKA 186

Query: 85  GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL 144
                     +  T       +      + +G+ +                    +    
Sbjct: 187 DTIHVAPMADMRPTRD-----ILHVEGEIENGDTLHVFLLHAPSRMGGERYSRPFRLYVA 241

Query: 145 EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL 204
                       +           + + A       +       +  +      +     
Sbjct: 242 GLLCQAVDSLRSLYADPRILVMGDFNDYADS--PSVRLLCTRGFVNVSARAHGNNGAKGT 299

Query: 205 YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKP------------------- 245
           Y +      +W       +D I++S      + S  +                       
Sbjct: 300 YRY----HGAWGS-----LDQILVSENLCPWVISCHVHDAAFLLEEDDKYGGVKPRRNYN 350

Query: 246 --RGWTKPSDHTPVIV 259
             R     SDH P+++
Sbjct: 351 GMRYNNGFSDHLPLVL 366


>gi|288904371|ref|YP_003429592.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           gallolyticus UCN34]
 gi|306830403|ref|ZP_07463573.1| RgfB protein [Streptococcus gallolyticus subsp. gallolyticus
           TX20005]
 gi|325977367|ref|YP_004287083.1| endonuclease/exonuclease/phosphatase [Streptococcus gallolyticus
           subsp. gallolyticus ATCC BAA-2069]
 gi|288731096|emb|CBI12642.1| putative endonuclease/exonuclease/phosphatase family protein
           [Streptococcus gallolyticus UCN34]
 gi|304427428|gb|EFM30530.1| RgfB protein [Streptococcus gallolyticus subsp. gallolyticus
           TX20005]
 gi|325177295|emb|CBZ47339.1| Endonuclease/exonuclease/phosphatase [Streptococcus gallolyticus
           subsp. gallolyticus ATCC BAA-2069]
          Length = 271

 Score = 40.2 bits (92), Expect = 0.35,   Method: Composition-based stats.
 Identities = 43/276 (15%), Positives = 81/276 (29%), Gaps = 26/276 (9%)

Query: 5   TVATWN------VNSIRARIHNLAAWIKENNPDIICLQE---------TKTED--KNFPF 47
              T N       NS++ ++ +LA  I   N D+ICLQE         TK  D  +  P 
Sbjct: 3   KFLTLNTHSWLEANSLK-KLFDLAETIYSENYDVICLQEINQDIRGLLTKEVDGYEKLPG 61

Query: 48  E-TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
              L   NY ++        G      +    I      + + + ++       I    +
Sbjct: 62  SPALHRDNYALQLVNYLRSQGRYYYWSWAYNHIGYEKYNEGVVILSKTPIKVNDILVSDV 121

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
                +      +  T+ D K   +         +    E           P+P      
Sbjct: 122 DDETDFHTRRVLVAETEIDQKPITVVSLHMSWFGKGFESEWQKLETALLDYPKPLVLMGD 181

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226
                D      +  S   LQ+                ++  +         + +++DH+
Sbjct: 182 FNNPTDTAGYDMILNSPLDLQDSHKVAK-----KVQGDHTIIEDIDGWEGNKQSLKVDHV 236

Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
             S +    + S+ +          SDH  + V L+
Sbjct: 237 FTSKDID--ILSSTVTFDGGEAPIVSDHFGLAVELN 270


>gi|156254839|gb|ABU62831.1| Zorro3 ORF2 protein [Expression vector pPZ3TA]
 gi|183240792|gb|ACC61187.1| unknown [synthetic construct]
          Length = 1149

 Score = 40.2 bits (92), Expect = 0.35,   Method: Composition-based stats.
 Identities = 31/232 (13%), Positives = 69/232 (29%), Gaps = 12/232 (5%)

Query: 18  IHNLAAWIKENN-PDIICLQETK-TEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75
           +      I E++  DI  +QE +    + F +   + L  H        +  +     + 
Sbjct: 30  LDIFLKLIGEHSMIDIWFIQEIRFVSQEQFNY-INKILKQHNAQLRMHHFEDLTGFLIHS 88

Query: 76  PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135
           P   +     D+ +      E   +I   TL          N + S   D +++ +K F+
Sbjct: 89  PHAKLKFKIRDNDNHHTTHFEGRISILDITLITNEDITLINNYLHSGNMDAQMTLLKAFI 148

Query: 136 RFASQRLELEEPLIFAG---DYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192
           ++ +   +     I  G   ++ +        +       +    E+ Q           
Sbjct: 149 KYIANLKKHTNHNIIYGGDYNHIMSLDDVQLPSDQTRYIISKKESEIIQLMSNFYKKWKL 208

Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK 244
                  +     +F    +         R+D I +       L + RI  +
Sbjct: 209 QDAFQIRNNLQPTNFHSNKSVKK------RLDRIYIDSRIRRKLRNCRILEE 254


>gi|297581461|ref|ZP_06943384.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|297534299|gb|EFH73137.1| conserved hypothetical protein [Vibrio cholerae RC385]
          Length = 869

 Score = 40.2 bits (92), Expect = 0.35,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 29/76 (38%), Gaps = 24/76 (31%)

Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSA---RI-----------------DTKPRG 247
           W Y   S++   G  +DH+++SP     +  A    I                   K + 
Sbjct: 775 WSY---SFNDEVGA-LDHLLISPSLKHKVVDATDWHINGAESTLFDYNDEFKGNLPKYKD 830

Query: 248 WTKPSDHTPVIVSLDI 263
             + SDH P ++ L+I
Sbjct: 831 QFRASDHDPAVLELNI 846


>gi|302338290|ref|YP_003803496.1| endonuclease/exonuclease/phosphatase [Spirochaeta smaragdinae DSM
           11293]
 gi|301635475|gb|ADK80902.1| Endonuclease/exonuclease/phosphatase [Spirochaeta smaragdinae DSM
           11293]
          Length = 250

 Score = 40.2 bits (92), Expect = 0.36,   Method: Composition-based stats.
 Identities = 40/247 (16%), Positives = 67/247 (27%), Gaps = 29/247 (11%)

Query: 21  LAAWIKENNPDIICLQETKTE-----DKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75
           L  ++   NPDI C QE + E     D+  PF      +++        Y    +  +  
Sbjct: 27  LEDFLVRFNPDICCFQEIREETMRFLDEAMPFHARVEDDFNGWRNEGNIYYRKDLFRETG 86

Query: 76  PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135
             E+   +P  D  +    +E         +   +L   +      T    +     +  
Sbjct: 87  HTELFLDMPEPDRRLFILDLECLADGRKFQVCTVHLTHQNNRDEQDTGTSYRHEEALKIA 146

Query: 136 RFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAI 195
           R+   R     PL+  GD+N    P                 E+                
Sbjct: 147 RWLKNRKSDAPPLLLCGDFNDPWHPSRILAE---AGLNDVFYELGLLQPPTFPNPALSEE 203

Query: 196 RATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHT 255
              ++T                     ID IM       +L S             SDH 
Sbjct: 204 IYMNET---------------------IDRIMYGGGPLPVLASVVDFHGSGASCGVSDHK 242

Query: 256 PVIVSLD 262
           PV+   +
Sbjct: 243 PVVAVFE 249


>gi|169787490|gb|ACA80184.1| putative DNA lyase [Colletotrichum sublineolum]
          Length = 233

 Score = 40.2 bits (92), Expect = 0.36,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 21/57 (36%)

Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81
           +    DI+ +QETK + K+   + +    + +     K   G + +  Y       
Sbjct: 2  FETLEADIVVMQETKIQRKDLRDDMVLVPGWDVVFSLPKHKKGYSGVVIYTRNATCC 58


>gi|169787244|gb|ACA80061.1| putative DNA lyase [Colletotrichum sublineolum]
 gi|169787290|gb|ACA80084.1| putative DNA lyase [Colletotrichum sublineolum]
 gi|169787486|gb|ACA80182.1| putative DNA lyase [Colletotrichum sublineolum]
          Length = 233

 Score = 40.2 bits (92), Expect = 0.36,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 21/57 (36%)

Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81
           +    DI+ +QETK + K+   + +    + +     K   G + +  Y       
Sbjct: 2  FETLEADIVVMQETKIQRKDLRDDMVLVPGWDVVFSLPKHKKGYSGVVIYTRNATCC 58


>gi|169787240|gb|ACA80059.1| putative DNA lyase [Glomerella tucumanensis]
 gi|169787246|gb|ACA80062.1| putative DNA lyase [Colletotrichum sublineolum]
 gi|169787292|gb|ACA80085.1| putative DNA lyase [Colletotrichum sublineolum]
 gi|169787482|gb|ACA80180.1| putative DNA lyase [Colletotrichum sublineolum]
 gi|169787484|gb|ACA80181.1| putative DNA lyase [Colletotrichum sublineolum]
          Length = 233

 Score = 40.2 bits (92), Expect = 0.36,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 21/57 (36%)

Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81
           +    DI+ +QETK + K+   + +    + +     K   G + +  Y       
Sbjct: 2  FETLEADIVVMQETKIQRKDLRDDMVLVPGWDVVFSLPKHKKGYSGVVIYTRNATCC 58


>gi|169787214|gb|ACA80046.1| putative DNA lyase [Glomerella tucumanensis]
          Length = 233

 Score = 40.2 bits (92), Expect = 0.36,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 21/57 (36%)

Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81
           +    DI+ +QETK + K+   + +    + +     K   G + +  Y       
Sbjct: 2  FETLEADIVVMQETKIQRKDLRDDMVLVPGWDVVFSLPKHKKGYSGVVIYTRNATCC 58


>gi|158312783|ref|YP_001505291.1| endonuclease/exonuclease/phosphatase [Frankia sp. EAN1pec]
 gi|158108188|gb|ABW10385.1| Endonuclease/exonuclease/phosphatase [Frankia sp. EAN1pec]
          Length = 259

 Score = 40.2 bits (92), Expect = 0.36,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 21/41 (51%), Gaps = 6/41 (14%)

Query: 4  VTVATWNV-NSI-----RARIHNLAAWIKENNPDIICLQET 38
          + V ++NV + +     R  +   AA + + + D++ LQE 
Sbjct: 1  MRVGSFNVMHGLSLADGRVEVDRFAAAVADLDCDVLGLQEV 41


>gi|156335524|ref|XP_001619610.1| hypothetical protein NEMVEDRAFT_v1g150827 [Nematostella
          vectensis]
 gi|156203139|gb|EDO27510.1| predicted protein [Nematostella vectensis]
          Length = 113

 Score = 40.2 bits (92), Expect = 0.36,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 3/56 (5%)

Query: 6  VATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIET 59
          + + N + +R+  R     + ++ N  DII LQET   D+    + L+  N  I  
Sbjct: 4  LVSINSHGLRSQDRRATAFSLLRRNRYDIILLQETHWTDE-IQDDILREWNGDIYF 58


>gi|118361191|ref|XP_001013826.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena
          thermophila]
 gi|89295593|gb|EAR93581.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena
          thermophila SB210]
          Length = 276

 Score = 40.2 bits (92), Expect = 0.36,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 6/40 (15%)

Query: 4  VTVATWNV-----NSIRARIHNLAAWIKENNPDIICLQET 38
          +   ++NV     N +  R   L     +++PD ICLQE 
Sbjct: 38 LKFISYNVWFDQFNFV-ERNQELRKLFLKHDPDFICLQEV 76


>gi|68491768|ref|XP_710326.1| polyprotein of L1-like non-LTR retrotransposon Zorro 3 [Candida
           albicans SC5314]
 gi|68491785|ref|XP_710318.1| polyprotein of L1-like non-LTR retrotransposon Zorro 3 [Candida
           albicans SC5314]
 gi|46431502|gb|EAK91055.1| polyprotein of L1-like non-LTR retrotransposon Zorro 3 [Candida
           albicans SC5314]
 gi|46431511|gb|EAK91063.1| polyprotein of L1-like non-LTR retrotransposon Zorro 3 [Candida
           albicans SC5314]
          Length = 1149

 Score = 40.2 bits (92), Expect = 0.36,   Method: Composition-based stats.
 Identities = 31/232 (13%), Positives = 69/232 (29%), Gaps = 12/232 (5%)

Query: 18  IHNLAAWIKENN-PDIICLQETK-TEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75
           +      I E++  DI  +QE +    + F +   + L  H        +  +     + 
Sbjct: 30  LDIFLKLIGEHSMIDIWFIQEIRFVSQEQFNY-INKILKQHNAQLRMHHFEDLTGFLIHS 88

Query: 76  PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135
           P   +     D+ +      E   +I   TL          N + S   D +++ +K F+
Sbjct: 89  PHAKLKFKIRDNDNHHTTHFEGRISILDITLITNEDITLINNYLHSGNMDAQMTLLKAFI 148

Query: 136 RFASQRLELEEPLIFAG---DYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192
           ++ +   +     I  G   ++ +        +       +    E+ Q           
Sbjct: 149 KYIANLKKHTNHNIIYGGDYNHIMSLDDVQLPSDQTRYIISKKESEIIQLMSNFYKKWKL 208

Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK 244
                  +     +F    +         R+D I +       L + RI  +
Sbjct: 209 QDAFQIRNNLQPTNFHSNKSVKK------RLDRIYIDSRIRRKLRNCRILEE 254


>gi|324991280|gb|EGC23213.1| RgfB protein [Streptococcus sanguinis SK353]
          Length = 271

 Score = 40.2 bits (92), Expect = 0.36,   Method: Composition-based stats.
 Identities = 29/250 (11%), Positives = 69/250 (27%), Gaps = 21/250 (8%)

Query: 18  IHNLAAWIKENNPDIICLQETK--TEDKNFPFETLQSLNYHIETCGQKSYNGVAILS--- 72
           ++ LA  I +   D+ICLQE    TE +           Y       + +     L    
Sbjct: 21  LNQLAERILQEKYDVICLQEVNQLTESEQVVQAPF----YQAVEGAIEIHQDHFALCLVE 76

Query: 73  ------KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDD 126
                          +  G D+  +   I +   +  + + +  +  P           +
Sbjct: 77  KLAEAGLDYHWSWAYNHIGFDIYNEGVAILSRKPLTPREVLVSEVNDPRDYHTRKVLLAE 136

Query: 127 KISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL 186
                +     +      ++     G++  +          +           +Q +Q +
Sbjct: 137 TEVEGQLLTIASCHLSWWDKGFQ--GEWAKLEAELLKAESPLVLMGDFNNPVGQQGYQTI 194

Query: 187 QN--MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK 244
               +   D+  A  +     +     A        ++ID++  S      +  + +   
Sbjct: 195 LASPLKLQDSHIAAKEIVGEATVEGTIAGWDDNKHALKIDYVFTSQGM--NIERSAVVFD 252

Query: 245 PRGWTKPSDH 254
            +     SDH
Sbjct: 253 GKETPVVSDH 262


>gi|315502378|ref|YP_004081265.1| endonuclease/exonuclease/phosphatase [Micromonospora sp. L5]
 gi|315408997|gb|ADU07114.1| Endonuclease/exonuclease/phosphatase [Micromonospora sp. L5]
          Length = 675

 Score = 40.2 bits (92), Expect = 0.36,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 7/42 (16%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
           IDH+ +SP       +  +   PR  T+ SDH PV +++ +P
Sbjct: 641 IDHVFVSPGL----TAGEV-RAPR--TEASDHLPVTLTVTLP 675


>gi|269119815|ref|YP_003307992.1| endonuclease/exonuclease/phosphatase [Sebaldella termitidis ATCC
           33386]
 gi|268613693|gb|ACZ08061.1| Endonuclease/exonuclease/phosphatase [Sebaldella termitidis ATCC
           33386]
          Length = 244

 Score = 40.2 bits (92), Expect = 0.36,   Method: Composition-based stats.
 Identities = 33/255 (12%), Positives = 68/255 (26%), Gaps = 58/255 (22%)

Query: 19  HNLAAWIKENNPDIICLQET-----KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSK 73
             +  ++K+  PD++ L E      +T  KN      + L ++     + S N   +   
Sbjct: 35  DKIGDFLKKYKPDVVGLVEVDLGSYRTRRKNQATFLGKQLGHYGIYEHKYSQNSSLMKVP 94

Query: 74  YQPIEIVTHLPG------DDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDK 127
               +    L G                +    + T+   I  ++L  G     T+    
Sbjct: 95  VLRRQGNAFLSGLQVEGQKFHYFNNGMKKLVIELETKDFSIFLIHLALG---AKTRLKQI 151

Query: 128 ISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQ 187
           +   +         +   +  +F G+  I               +               
Sbjct: 152 VELYEVIDSCTKPFIIAGDFNLFWGEEEIELFLRALNLKNANIKNIPTYP---------- 201

Query: 188 NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRG 247
                             S+         K     +D I+ S      ++  ++ T  R 
Sbjct: 202 ------------------SW-------KPKKV---LDFIIYSEGI--KINDFKVLTDVR- 230

Query: 248 WTKPSDHTPVIVSLD 262
               SDH P+ V  +
Sbjct: 231 ---LSDHLPLYVDFE 242


>gi|14286189|gb|AAF73434.2|AF254443_1 reverse transcriptase [Candida albicans]
          Length = 1149

 Score = 40.2 bits (92), Expect = 0.36,   Method: Composition-based stats.
 Identities = 31/232 (13%), Positives = 69/232 (29%), Gaps = 12/232 (5%)

Query: 18  IHNLAAWIKENN-PDIICLQETK-TEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75
           +      I E++  DI  +QE +    + F +   + L  H        +  +     + 
Sbjct: 30  LDIFLKLIGEHSMIDIWFIQEIRFVSQEQFNY-INKILKQHNAQLRMHHFEDLTGFLIHS 88

Query: 76  PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135
           P   +     D+ +      E   +I   TL          N + S   D +++ +K F+
Sbjct: 89  PHAKLKFKIRDNDNHHTTHFEGRISILDITLITNEDITLINNYLHSGNMDAQMTLLKAFI 148

Query: 136 RFASQRLELEEPLIFAG---DYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192
           ++ +   +     I  G   ++ +        +       +    E+ Q           
Sbjct: 149 KYIANLKKHTNHNIIYGGDYNHIMSLDDVQLPSDQTRYIISKKESEIIQLMSNFYKKWKL 208

Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK 244
                  +     +F    +         R+D I +       L + RI  +
Sbjct: 209 QDAFQIRNNLQPTNFHSNKSVKK------RLDRIYIDSRIRRKLRNCRILEE 254


>gi|146413308|ref|XP_001482625.1| hypothetical protein PGUG_05645 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 308

 Score = 40.2 bits (92), Expect = 0.37,   Method: Composition-based stats.
 Identities = 40/261 (15%), Positives = 83/261 (31%), Gaps = 28/261 (10%)

Query: 14  IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVA---- 69
           + +RIH+         P ++ LQE K    N   + L  LN   +T    ++ GV     
Sbjct: 66  LNSRIHDF--------PTLVGLQELK---HNQLVDVLAGLNGQNQTEFPWAHYGVGRDDG 114

Query: 70  ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKIS 129
           +        +   L  D L+   +++  T  + +     G+  +       + +   K++
Sbjct: 115 VEKGEYSAILYNTLEWDLLNGTYKWLSPTPDVPSYGWDAGSRRIVTMTTFRNKQTGTKVN 174

Query: 130 WIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNM 189
           +    L   S++   E   +  G   +IP  +  +    + + A        +       
Sbjct: 175 YFNTHLDNKSEQSRQESTKLIVGWLQLIPNDYPQFLLGDFNSIASDIAYETVADYMADTN 234

Query: 190 GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML-SPEATSL----LHSARIDTK 244
              +     +     Y+ ++Y       +    ID I   S          +    + + 
Sbjct: 235 VIANIHETGN--ETTYTGFEY------GDHQSVIDFIWAPSNSNKPKSGVEVVGYEVLSN 286

Query: 245 PRGWTKPSDHTPVIVSLDIPE 265
                + SDH PV     I  
Sbjct: 287 NYLDFRFSDHRPVTSHFRISS 307


>gi|83815332|ref|YP_444975.1| endonuclease/exonuclease/phosphatase family protein [Salinibacter
           ruber DSM 13855]
 gi|83756726|gb|ABC44839.1| endonuclease/exonuclease/phosphatase family [Salinibacter ruber DSM
           13855]
          Length = 386

 Score = 40.2 bits (92), Expect = 0.37,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 5/44 (11%)

Query: 220 GIRIDHIMLSPEATSLLHSARIDTKP--RGWTKP-SDHTPVIVS 260
           G RID+++  P AT  +  A +      R    P SDH PV V 
Sbjct: 340 GARIDYVL--PAATVAVDDAGVWRPAPARVPDVPVSDHFPVWVD 381


>gi|156396904|ref|XP_001637632.1| predicted protein [Nematostella vectensis]
 gi|156224746|gb|EDO45569.1| predicted protein [Nematostella vectensis]
          Length = 119

 Score = 40.2 bits (92), Expect = 0.37,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 39/128 (30%), Gaps = 9/128 (7%)

Query: 149 IFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFW 208
                       ++               E       L  +  T  +      H   ++ 
Sbjct: 1   DMNAKVGDQNWDYERVMGKHGLGVRNDNGERLCELCDLDELVITATLFPHRTIHKA-TWI 59

Query: 209 DYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268
               D  +KN+   IDH++++    + +   R+    R     SDH  V  ++ I   + 
Sbjct: 60  S--PDGKTKNQ---IDHVLVNKRFRNSVKDTRVF---RSSDVGSDHYLVCATVKIRLRKV 111

Query: 269 KQQDSTSQ 276
           +    TS+
Sbjct: 112 QNGRVTSE 119


>gi|329963050|ref|ZP_08300830.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           fluxus YIT 12057]
 gi|328529091|gb|EGF56021.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           fluxus YIT 12057]
          Length = 287

 Score = 40.2 bits (92), Expect = 0.37,   Method: Composition-based stats.
 Identities = 31/269 (11%), Positives = 74/269 (27%), Gaps = 24/269 (8%)

Query: 6   VATWNV------NSI---RARIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNY 55
           V ++N+      +S+   + R    A  I+  + DI+  QE    + ++   + L     
Sbjct: 31  VMSFNIRYDNPEDSLDNWKYRKDRAANAIRFYDVDILGTQEVLHNQLEDL-KQRLPEYGV 89

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
                      G      Y+         G     +   +  +   +    RI +     
Sbjct: 90  IGVGREDGKEKGEYSALWYKKERFNLLDSGYFWLSETPEVAGSKGWDGACERIASWAKLQ 149

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
                   +      +   L         E   +     N +           + ++   
Sbjct: 150 DKASGKEFFA-----LNTHLDHVGVVARREGISLILDRINALSDGLPVIVTGDFNSEPES 204

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR--IDHIMLSPEAT 233
            +    +              +       +SF D+    + K    R  ID++ +     
Sbjct: 205 DVIKHVTDPSNPEHLTDARQASPIVYGPAWSFHDFGKIPYDK----RPLIDYVFVRNRL- 259

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
             +    +  +       SDH P++V+++
Sbjct: 260 -KVLRYGVLAETEENAFLSDHAPILVTVE 287


>gi|296444974|ref|ZP_06886936.1| Endonuclease/exonuclease/phosphatase [Methylosinus trichosporium
           OB3b]
 gi|296257642|gb|EFH04707.1| Endonuclease/exonuclease/phosphatase [Methylosinus trichosporium
           OB3b]
          Length = 325

 Score = 40.2 bits (92), Expect = 0.37,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 19/53 (35%), Gaps = 9/53 (16%)

Query: 218 NKGIR--IDHIMLSPEATSLLHSARIDTKPRGWTK-------PSDHTPVIVSL 261
           + G R  +DHI++S    +      I  +              S H P++ S 
Sbjct: 263 HAGRRTLLDHILVSRALAARCARVEIMNEGLADEATAPDPILGSLHAPIMASF 315


>gi|260425583|ref|ZP_05779563.1| endonuclease/exonuclease/phosphatase [Citreicella sp. SE45]
 gi|260423523|gb|EEX16773.1| endonuclease/exonuclease/phosphatase [Citreicella sp. SE45]
          Length = 225

 Score = 40.2 bits (92), Expect = 0.37,   Method: Composition-based stats.
 Identities = 28/269 (10%), Positives = 65/269 (24%), Gaps = 58/269 (21%)

Query: 4   VTVATWNVN---SI-RARIH-NLAAWIKENNPDIICLQE--TKT--EDKNFPFETLQ-SL 53
           + VA++N+     + R R    +   +     D++ LQE   +        P   ++   
Sbjct: 3   LKVASYNIRKAMGLDRRRDPARILKVLNRIGADVVMLQEADLRLGPRPTAIPRFLIEQET 62

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
           +Y +      S N V+I      + +   L    +                 +   +   
Sbjct: 63  DYEVA---DVSVNDVSIGWHGNAMLVRKGLQRGGVRRLELPGLEPRGAVLVEVEGISFVG 119

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
            H   +   +     +  +      +      +   ++      P  +D    +   +  
Sbjct: 120 AHLGLMRRFRLLQMTAIREHLSGIETTAFIAGDFNEWSDVRGYEPWENDFKLVLPGRSYH 179

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
                                                  D ++    +RI          
Sbjct: 180 AARPVAAL-------------------------------DGFAYGNALRI---------- 198

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
                  +  +       SDH P+   LD
Sbjct: 199 ---ERMGVMREGPARV-ASDHLPIWAELD 223


>gi|157736673|ref|YP_001489356.1| hypothetical protein Abu_0412 [Arcobacter butzleri RM4018]
 gi|157698527|gb|ABV66687.1| conserved hypothetical protein [Arcobacter butzleri RM4018]
          Length = 313

 Score = 40.2 bits (92), Expect = 0.37,   Method: Composition-based stats.
 Identities = 45/286 (15%), Positives = 76/286 (26%), Gaps = 52/286 (18%)

Query: 22  AAWIKEN----NPDIICLQETKTEDK--NFPFETLQSLNYHIETCGQKSYNG-------V 68
            AW K      N DI+  QE  + D+  N   E        ++       N        V
Sbjct: 36  IAWCKNQLNLMNCDIVGFQEVFSNDELKNLCLEVGFKYFEVVDFAKVDKKNEKVYISTTV 95

Query: 69  AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKI 128
           AI SK+  I I           +          N + + +   +L             K 
Sbjct: 96  AIASKFPIINIEKIDTKSFKFARIPIKAIISLPNEKNITVYITHLKSNRENEFEYIFTKN 155

Query: 129 SWIKRFLRFASQRLELEEPLIFAGDYN----------------IIPQPHDCYNP------ 166
             ++  L+     L+    L      N                I+    +          
Sbjct: 156 DTLEDKLKKVEVALKDNYSLSLKQRINEAKILFYDIKSNKTPTILMCDLNDKEFSITIDA 215

Query: 167 ----IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR 222
                 +  +      +      L      +            +   Y+A      KG  
Sbjct: 216 LTNKRFYNKNLKKDDYLLFDAYYLHKPKIYNPHPEFKGIKRTPT--SYFAG-----KGNI 268

Query: 223 IDHIMLSPEATSLLHSARIDTKPR-----GWTKPSDHTPVIVSLDI 263
           +D+I +S E    + S  +  K       G  K SDH  V+  ++I
Sbjct: 269 LDYIFVSKEL-QKISSYEVFDKHLQKNHNGSLKQSDHAQVVCEIEI 313


>gi|225444482|ref|XP_002268030.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 413

 Score = 40.2 bits (92), Expect = 0.37,   Method: Composition-based stats.
 Identities = 38/294 (12%), Positives = 73/294 (24%), Gaps = 58/294 (19%)

Query: 1   MSVVTVATWNVNSIR------ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           +S + + ++NV   R       R+  L   I+ ++PD+IC QE                 
Sbjct: 142 LSSLKILSYNVW-FREDLEMDKRMQALGDLIQLHSPDLICFQEV------------TPNI 188

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           Y +                              L  +      +    +    I    L 
Sbjct: 189 YDVFQQSCW---WKVYRCSVPNEMAHLRPYFCMLLSKLPVKSFSCKRFSN--SIMGRELC 243

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
                        ++         +     +       D           NP +      
Sbjct: 244 IAELEVQAGKPLVLATSHLESPCPAPPKWDQMYSKERVDQAKEALNLLTKNPNVIFGGDM 303

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI--RIDHIMLSPEA 232
              E       L +    DA        + +++        S N+ +  R+D  M     
Sbjct: 304 NWDEKSDGQFPLPDGWV-DAWADLRPGENGWTYDTKSNQMLSGNRTLQKRLDRFMC---- 358

Query: 233 TSLLHSARI------------------DTKPRGWTK-------PSDHTPVIVSL 261
              LH  +I                  + K R   +       PSDH  +++++
Sbjct: 359 --RLHDFKISKIDMIGMEPIPGLSYCKEKKVRKEMQQLVLPVLPSDHYGLLLTI 410


>gi|147797602|emb|CAN78035.1| hypothetical protein VITISV_031077 [Vitis vinifera]
          Length = 844

 Score = 40.2 bits (92), Expect = 0.37,   Method: Composition-based stats.
 Identities = 21/228 (9%), Positives = 55/228 (24%), Gaps = 30/228 (13%)

Query: 33  ICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQA 92
           +C+QETK +                          +          +        + +  
Sbjct: 1   MCIQETKVQ-----------------CMTDSIARSIGSGRFLGWRAVNAEGASGGIFICW 43

Query: 93  RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG 152
                      +     +    +        +    + +        +    EE     G
Sbjct: 44  DRRALDMLDWEEGQFTLSCRFCNIEDGNVWVF----TGVYXPFTKVERNALWEEFGAIRG 99

Query: 153 DYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYA 212
            +         +N  ++  +      +  + +    +     +         +++     
Sbjct: 100 LWEDPWCIGGDFNITLFSRERSGQRRISSAMRNFAEIVDDLGLVDLPLQGGDFTW----- 154

Query: 213 DSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
           +    N+   R+D  M+SP              PR     SDH P+++
Sbjct: 155 NGGLHNQTWARLDRFMVSPSWIDQFSGINQCRLPR---PVSDHFPIML 199


>gi|46116288|ref|XP_384162.1| hypothetical protein FG03986.1 [Gibberella zeae PH-1]
          Length = 510

 Score = 40.2 bits (92), Expect = 0.37,   Method: Composition-based stats.
 Identities = 35/298 (11%), Positives = 79/298 (26%), Gaps = 47/298 (15%)

Query: 1   MSVVTVATWNV-NS---IRARIHNLAAWIKENNPDIICLQETKTEDKN---FPFETLQSL 53
           +S + V + N+ N    +         ++     D++ +QE    D+     P     +L
Sbjct: 225 LSQLKVLSLNMWNGGTGVTNYHDKQIKFLASCGADVVGIQE----DQQGRHVPRLA-DAL 279

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
            ++       S   V ILSKY        + G       +                  Y 
Sbjct: 280 GWY----HWSSGGDVGILSKYPITADYGVISGPARSGGVKIALDGTNKEINFFVAHLGYT 335

Query: 114 PHGNPITSTKYD---------------DKISWIKRFLRFASQRLELEEPLIFAGDYNIIP 158
           P+G   T   +                 ++      ++      +     +         
Sbjct: 336 PYGPYDTCFDHYPVDKIIEREAQSGRTPQMKATLAGMKSQLDNADEIPTFLVGDFNAPSH 395

Query: 159 QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDT---HHLYSF---WDYYA 212
             +           +        +    +  G  D+ R  H         ++   + +  
Sbjct: 396 LDYTEGLKDKNCGYSDIK---WPTSVLPEEAGLIDSFRVAHPDPVKEQGITWSPIYIWNG 452

Query: 213 DSWSKNKGIRIDHIM-------LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                    RID ++       ++   T ++   +     +     SDH  V+ + +I
Sbjct: 453 GRRRPEPLDRIDFVLHKGKGLKVTDSQTVVVGEPKPQPNHKENEWFSDHRAVLTTYEI 510


>gi|156374024|ref|XP_001629609.1| predicted protein [Nematostella vectensis]
 gi|156216613|gb|EDO37546.1| predicted protein [Nematostella vectensis]
          Length = 271

 Score = 40.2 bits (92), Expect = 0.38,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 43/124 (34%), Gaps = 4/124 (3%)

Query: 4   VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + V T N  S++ +       + I    PDI+ + ET   D  F  E L+   Y      
Sbjct: 7   LRVLTLNACSLKGKDKRLEFQSLIDNYKPDIVNVNETHINDTVFSAEILEK-GY-TIFRK 64

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
            ++  G  +LS +    +VTH    D + +  + +     +           P  N    
Sbjct: 65  DRNEFGGGVLSAFSNHLVVTHEEQMDGNYEGIWSKINIAGSKSLFVGSVYRTPDSNVDPL 124

Query: 122 TKYD 125
              D
Sbjct: 125 VALD 128


>gi|170084023|ref|XP_001873235.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164650787|gb|EDR15027.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 476

 Score = 40.2 bits (92), Expect = 0.38,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 28/72 (38%), Gaps = 18/72 (25%)

Query: 4   VTVATWNV--------------NSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPF 47
           + V TWN+              + ++A  R   L   I  +N DI+CLQE    ++  P 
Sbjct: 57  IRVLTWNLLAQCLVRRQLFPASDCLKAGQREPVLHREILSHNADILCLQEVDRLEQLLP- 115

Query: 48  ETLQSLNYHIET 59
             LQ   Y    
Sbjct: 116 -VLQKAGYSHHF 126


>gi|168044587|ref|XP_001774762.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673917|gb|EDQ60433.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 293

 Score = 40.2 bits (92), Expect = 0.38,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 30/97 (30%), Gaps = 21/97 (21%)

Query: 4   VTVATWNV--NSI-------RARIHNLAAW----------IKENNPDIICLQETKTEDKN 44
           + V  WNV  + +       R        W          I +++P +ICLQE    D  
Sbjct: 41  LRVMQWNVLADGLAQSGDFDR-VEKKFLEWNHRAPLLLGRILKDDPHVICLQELNHFDDF 99

Query: 45  FPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81
           F  E L+   Y  E   +         S      I  
Sbjct: 100 FLPE-LKRHGYVGEYWQKPCSAAQKFESPADGCAIFY 135


>gi|147803604|emb|CAN75353.1| hypothetical protein VITISV_030454 [Vitis vinifera]
          Length = 1101

 Score = 40.2 bits (92), Expect = 0.38,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 23/59 (38%), Gaps = 7/59 (11%)

Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
              +YS+    +   S     R+D  ++S     +   A     PR     SDH P+++
Sbjct: 212 QGGVYSW----SGGRSNQTWARLDRFLVSQGWLDIFRGAXQCRLPR---PTSDHFPILL 263


>gi|292609568|ref|XP_697426.2| PREDICTED: nocturnin-like isoform 2 [Danio rerio]
          Length = 378

 Score = 39.8 bits (91), Expect = 0.39,   Method: Composition-based stats.
 Identities = 35/264 (13%), Positives = 64/264 (24%), Gaps = 26/264 (9%)

Query: 21  LAAWIKENNPDIICLQETKTEDKNFPFE--TLQSLNYHIETCG--QKSYNGVAILSKYQP 76
           +   I    PDI+CLQE    D  F      L +L Y    C         V   +    
Sbjct: 121 ILEEILTYKPDILCLQEV---DHYFDMFQPVLATLGYQSSFCPKPWSPCLDVENNNGPDG 177

Query: 77  IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK-----YDDKISWI 131
             +  +     L        +   + T  + I                           +
Sbjct: 178 CALFFNHKRFQLVNTTHLRLSAMMLKTNQVAIVAALRCRSTGRVFCVGVTHLKARSGWEV 237

Query: 132 KRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191
            R  + +     L                        +  +    +    +   L     
Sbjct: 238 LRSAQGSDLLRNLRNITQKIETEENAESAIPLIVCGDFNAEPSEDVYRNFATSSLGLDSA 297

Query: 192 TDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID--------- 242
              +     T   Y+ W       S +    +D++  S  A     +A +D         
Sbjct: 298 YKLLSTDGKTEPPYTTWKIRPSGESCHT---LDYVWYSHRAFD--VNAVLDFPTAEQIGP 352

Query: 243 TKPRGWTKPSDHTPVIVSLDIPEP 266
            +   +  PSDH  ++      +P
Sbjct: 353 NRLPSYNYPSDHLSLVCDFCFTDP 376


>gi|187924331|ref|YP_001895973.1| hypothetical protein Bphyt_2351 [Burkholderia phytofirmans PsJN]
 gi|187715525|gb|ACD16749.1| conserved hypothetical protein [Burkholderia phytofirmans PsJN]
          Length = 226

 Score = 39.8 bits (91), Expect = 0.39,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 20/38 (52%), Gaps = 4/38 (10%)

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           D I ++ + TS + +  +D      ++ SDH P+ + L
Sbjct: 192 DFIFVTEDLTSRIAACEVD----AVSEASDHQPMWLEL 225


>gi|308805745|ref|XP_003080184.1| Predicted Mg2+-dependent phosphodiesterase TTRAP (ISS)
           [Ostreococcus tauri]
 gi|116058644|emb|CAL54351.1| Predicted Mg2+-dependent phosphodiesterase TTRAP (ISS)
           [Ostreococcus tauri]
          Length = 387

 Score = 39.8 bits (91), Expect = 0.39,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 10/42 (23%)

Query: 4   VTVATWNV-------NSIRARIHNLAAWIKENNPDIICLQET 38
           + + T+NV           AR+  L   I E +P ++CLQE 
Sbjct: 111 LRLLTYNVWFGDVAQA---ARLEALGKVIAECDPHVLCLQEV 149


>gi|68488901|ref|XP_711695.1| potential phospholipase C/sphingomyelinase Isc1p [Candida albicans
           SC5314]
 gi|46433016|gb|EAK92473.1| potential phospholipase C/sphingomyelinase Isc1p [Candida albicans
           SC5314]
          Length = 438

 Score = 39.8 bits (91), Expect = 0.39,   Method: Composition-based stats.
 Identities = 37/302 (12%), Positives = 84/302 (27%), Gaps = 38/302 (12%)

Query: 4   VTVATWNVNSIR-------ARIHNLAAWIK-----ENNPDIICLQETKTEDKNFPFETLQ 51
           + + T+N   ++        R+  +A  +      + + DI+ LQE   E+     + + 
Sbjct: 20  IKLLTFNTWGLKFISKHRKERLRAIADALANPKCPDEDYDIVALQEIWCEEDWQYLDLVC 79

Query: 52  SLNY---HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108
              Y    +   G  S  G+A+LSK    E   +    +    A F    +   +  + +
Sbjct: 80  RPRYPYRRVFKAGIVSGPGLAVLSKISIAETFLYRFPINGRPSAFFRGDFYVGKSIAVTM 139

Query: 109 GN--------------LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDY 154
                                     ++    +      F +      +    +I  GD 
Sbjct: 140 FQPHHPDILPIALLNSHMHAPYGSGDASYSTHRACQAWDFAKLVRMLKKAGYAVIQVGDL 199

Query: 155 NIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADS 214
           N  P         +          + +      +   T ++        + +        
Sbjct: 200 NSKPDSLPYKLFTVEGGLTDSWNVLNKDNVVPNDQIATLSLEDQISLAGV-TCNSRLNTW 258

Query: 215 WSKNKGI---RIDHIMLSPE----ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPR 267
                     R+D+ ++        ++ +        P   +  SDH    V L I    
Sbjct: 259 RESRPLWEACRLDYALIDASNITPVSAQVKFVDKLPPPLSCSY-SDHFAYSVDLVIRPKE 317

Query: 268 KK 269
           ++
Sbjct: 318 ER 319


>gi|225445027|ref|XP_002280110.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 1034

 Score = 39.8 bits (91), Expect = 0.39,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 22/62 (35%), Gaps = 11/62 (17%)

Query: 201 THHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKP-SDHTPVI 258
               +++          N+   R+D  ++SP               R   +P SDH P++
Sbjct: 138 QGGAFTW-----SGGLNNQSWARLDRFLVSPSWLDKFSGV----NQRRLPRPVSDHFPIL 188

Query: 259 VS 260
           + 
Sbjct: 189 LE 190


>gi|328856732|gb|EGG05852.1| hypothetical protein MELLADRAFT_107286 [Melampsora larici-populina
           98AG31]
          Length = 419

 Score = 39.8 bits (91), Expect = 0.40,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 26/69 (37%), Gaps = 18/69 (26%)

Query: 4   VTVATWNV--------N---S-----IRARIHNLAAWIKENNPDIICLQET-KTEDKNFP 46
           + + TWNV        N          + R   +   I   +PD+ICLQE  +  D   P
Sbjct: 35  IKIMTWNVLAQCLVKRNLFPGSDCLKWKERGKTITEEIINYDPDVICLQEVDRLTDHG-P 93

Query: 47  FETLQSLNY 55
             T    +Y
Sbjct: 94  ILTKAGYDY 102


>gi|147856633|emb|CAN82456.1| hypothetical protein VITISV_010028 [Vitis vinifera]
          Length = 4128

 Score = 39.8 bits (91), Expect = 0.40,   Method: Composition-based stats.
 Identities = 30/244 (12%), Positives = 72/244 (29%), Gaps = 30/244 (12%)

Query: 18   IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPI 77
               +   ++    D++CL ETK +D                +    +  GV     +  +
Sbjct: 2420 RKLIKGVVRNQKADLVCLLETKVKD---------------VSTQLVNSVGVGRFLNWASV 2464

Query: 78   EIVTHLPGDDLDVQARFIEA-TFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
            +      G  L    R +E         ++ +       G       +    S +   + 
Sbjct: 2465 DARGTAGGLLLIWDNRVLENLEVESGGYSISVRFRNCSDG-------FSWIFSGVYGPVI 2517

Query: 137  FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIR 196
             + +    EE     G +         +N + +  +      +    ++   +     +R
Sbjct: 2518 GSEKEDFWEELGAIRGLWEDPWCIGGDFNAVRYPEERRNAPRLTADMRRFSEVIGELGLR 2577

Query: 197  ATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTP 256
                    +++        +     R+D  ++S +      +      PR     SDH+P
Sbjct: 2578 DIPLAGGPFTW----IGGLNSQAASRLDRFLISDQWEDHFSAISQSALPR---LVSDHSP 2630

Query: 257  VIVS 260
            +I+ 
Sbjct: 2631 IILE 2634


>gi|147778361|emb|CAN76280.1| hypothetical protein VITISV_013228 [Vitis vinifera]
          Length = 1821

 Score = 39.8 bits (91), Expect = 0.40,   Method: Composition-based stats.
 Identities = 15/167 (8%), Positives = 48/167 (28%), Gaps = 7/167 (4%)

Query: 94   FIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGD 153
             +     +      +G+  +          +    S +    +   +R   EE       
Sbjct: 902  VMWDKRVLEGLEFEVGSFSISCRFRNCEEGFVWVFSGLYGPSKGRERRELWEELAAIKXL 961

Query: 154  YNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD 213
            +N        +N + +  +     ++  + ++  +      +         +++      
Sbjct: 962  WNDPWCIAGDFNVVRFPAETSNGRQMSTAMREFSSFIDEFELVDPPLGGGAFTWIGGEGG 1021

Query: 214  SWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
            +       R+D  + S +    +  A    +       SDH P+++ 
Sbjct: 1022 ALKA----RLDRFLFSGDWEERVTGAM---QCLLTRPVSDHCPILLD 1061


>gi|196000682|ref|XP_002110209.1| predicted protein [Trichoplax adhaerens]
 gi|190588333|gb|EDV28375.1| predicted protein [Trichoplax adhaerens]
          Length = 213

 Score = 39.8 bits (91), Expect = 0.40,   Method: Composition-based stats.
 Identities = 17/192 (8%), Positives = 47/192 (24%), Gaps = 11/192 (5%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSY 65
           +ATWNV    ++    A ++ +   D++ LQE          + +    +      +   
Sbjct: 5   LATWNV----SQSKGFAQFLHQQ--DVVVLQE--ANPA--SRKEITQAGFKFIVGQRSHC 54

Query: 66  NGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYD 125
               I  +   +              A      + I               +   +    
Sbjct: 55  GETHIYVRQGMMAHPFGDEWPHGTACALID-DRWLICGVHWPPFKESKSLRSKCANWVMA 113

Query: 126 DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQK 185
              +     +   +     E        +    QP D    +    +  + ++    ++ 
Sbjct: 114 KLRNHEYVVVAGDTNMRNDENVSELDDTFLTAGQPADHRFTMDGYENKGWWVDRPFKWKC 173

Query: 186 LQNMGFTDAIRA 197
             +  +      
Sbjct: 174 RYDRVYLRNNEW 185


>gi|255532422|ref|YP_003092794.1| endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM
           2366]
 gi|255345406|gb|ACU04732.1| Endonuclease/exonuclease/phosphatase [Pedobacter heparinus DSM
           2366]
          Length = 312

 Score = 39.8 bits (91), Expect = 0.40,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 29/73 (39%), Gaps = 18/73 (24%)

Query: 2   SVVTVATWNVN---------SIRARIHNLAAWIKENNPDIICLQETKTE--------DKN 44
           + + V T+N++          I   +  +AA IK  +PD++ LQE            D+ 
Sbjct: 72  AKIKVMTYNIHIGNPPSKPAGI-VDLPAIAAVIKAQDPDLVALQEVDVNTNRSGTSLDEA 130

Query: 45  FPFETLQSLNYHI 57
                L  +NY  
Sbjct: 131 KELARLTGMNYFY 143


>gi|116203539|ref|XP_001227580.1| hypothetical protein CHGG_09653 [Chaetomium globosum CBS 148.51]
 gi|88175781|gb|EAQ83249.1| hypothetical protein CHGG_09653 [Chaetomium globosum CBS 148.51]
          Length = 1641

 Score = 39.8 bits (91), Expect = 0.40,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 13/40 (32%), Gaps = 4/40 (10%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
           ID ++ S E    L    I          SDH  +    D
Sbjct: 620 IDLVLASAELADQLLRCTIHP----CDHGSDHRAIETDFD 655


>gi|116197451|ref|XP_001224537.1| hypothetical protein CHGG_06881 [Chaetomium globosum CBS 148.51]
 gi|88178160|gb|EAQ85628.1| hypothetical protein CHGG_06881 [Chaetomium globosum CBS 148.51]
          Length = 1206

 Score = 39.8 bits (91), Expect = 0.40,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 13/40 (32%), Gaps = 4/40 (10%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
           ID ++ S E    L    I          SDH  +    D
Sbjct: 616 IDLVLASAELADQLLRCTIHP----CDHGSDHRAIETDFD 651


>gi|147779794|emb|CAN62294.1| hypothetical protein VITISV_019972 [Vitis vinifera]
          Length = 1851

 Score = 39.8 bits (91), Expect = 0.41,   Method: Composition-based stats.
 Identities = 20/169 (11%), Positives = 43/169 (25%), Gaps = 24/169 (14%)

Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH------ 161
           +          +   +    +S   + +   +  +       F  +              
Sbjct: 812 LICWDKRSLEIVDWEEGQYSLSCRFKNVEDGAVWVFTGVYGPFTKEERGCLWEELGAVRG 871

Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHD---------THHLYSFWDYYA 212
               P     D   TL  R+   + +            D            ++++     
Sbjct: 872 IWDEPWCLGGDFNSTLYQRERSHQGRITPIMRRFAHIIDDLGLVDLPLQGGVFTW----- 926

Query: 213 DSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
                N+   R+D  ++SP       S  I    R     SDH P+++ 
Sbjct: 927 SGGLNNQSWARLDRFLVSPSWLDKF-SGMIQR--RLPRPVSDHFPILLE 972


>gi|281341983|gb|EFB17567.1| hypothetical protein PANDA_018075 [Ailuropoda melanoleuca]
          Length = 123

 Score = 39.8 bits (91), Expect = 0.41,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 37/110 (33%), Gaps = 12/110 (10%)

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
                 E R     L  M   D  R  H     Y F+     ++S     RIDHI+    
Sbjct: 14  KQKSNKETRALNDMLDQMDLIDIYRTLHPRTTEYIFFSNAQGTFS-----RIDHILGHKI 68

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
             +      I          +DH+   + L+  +  K  ++S +  ++ I
Sbjct: 69  GLNRYQKTEIIPCI-----FTDHS--TLKLECNDKEKFGRNSNTWKLRTI 111


>gi|169787320|gb|ACA80099.1| putative DNA lyase [Colletotrichum eleusines]
          Length = 233

 Score = 39.8 bits (91), Expect = 0.41,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 24/61 (39%), Gaps = 3/61 (4%)

Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80
          +   ++    DI+ +QETK + K+   + +    + +     K   G + ++ Y      
Sbjct: 1  MFDILE---ADIVVMQETKIQRKDLHDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATC 57

Query: 81 T 81
           
Sbjct: 58 C 58


>gi|167923106|ref|ZP_02510197.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
          pseudomallei BCC215]
          Length = 296

 Score = 39.8 bits (91), Expect = 0.41,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 17/46 (36%)

Query: 4  VTVATWNVNSIRARIHNLAAW-----------IKENNPDIICLQET 38
          + +AT+N++        L AW           + E   D+I LQE 
Sbjct: 11 LRIATYNIHG------GLGAWTASAAERIAVVLDELCADVIALQEV 50


>gi|167898570|ref|ZP_02485971.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
          pseudomallei 7894]
          Length = 299

 Score = 39.8 bits (91), Expect = 0.41,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 17/46 (36%)

Query: 4  VTVATWNVNSIRARIHNLAAW-----------IKENNPDIICLQET 38
          + +AT+N++        L AW           + E   D+I LQE 
Sbjct: 14 LRIATYNIHG------GLGAWTASAAERIAVVLDELCADVIALQEV 53


>gi|167851455|ref|ZP_02476963.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
          pseudomallei B7210]
          Length = 290

 Score = 39.8 bits (91), Expect = 0.41,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 17/46 (36%)

Query: 4  VTVATWNVNSIRARIHNLAAW-----------IKENNPDIICLQET 38
          + +AT+N++        L AW           + E   D+I LQE 
Sbjct: 5  LRIATYNIHG------GLGAWTASAAERIAVVLDELCADVIALQEV 44


>gi|167742958|ref|ZP_02415732.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
          pseudomallei 14]
          Length = 292

 Score = 39.8 bits (91), Expect = 0.41,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 17/46 (36%)

Query: 4  VTVATWNVNSIRARIHNLAAW-----------IKENNPDIICLQET 38
          + +AT+N++        L AW           + E   D+I LQE 
Sbjct: 7  LRIATYNIHG------GLGAWTASAAERIAVVLDELCADVIALQEV 46


>gi|168031621|ref|XP_001768319.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162680497|gb|EDQ66933.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 256

 Score = 39.8 bits (91), Expect = 0.41,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 22/60 (36%), Gaps = 5/60 (8%)

Query: 202 HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
              ++ WD        N   RID   L+PE   +     I    R     SDH P+ + L
Sbjct: 115 QKHFT-WDNRRHP-PANICTRIDRAYLNPELIDMGGHVGIW---RILLNISDHAPIFIKL 169


>gi|217425444|ref|ZP_03456938.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
          pseudomallei 576]
 gi|254265260|ref|ZP_04956125.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
          pseudomallei 1710a]
 gi|217391695|gb|EEC31723.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
          pseudomallei 576]
 gi|254216262|gb|EET05647.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
          pseudomallei 1710a]
          Length = 338

 Score = 39.8 bits (91), Expect = 0.41,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 17/46 (36%)

Query: 4  VTVATWNVNSIRARIHNLAAW-----------IKENNPDIICLQET 38
          + +AT+N++        L AW           + E   D+I LQE 
Sbjct: 53 LRIATYNIHG------GLGAWTASAAERIAVVLDELCADVIALQEV 92


>gi|147770314|emb|CAN73640.1| hypothetical protein VITISV_043180 [Vitis vinifera]
          Length = 719

 Score = 39.8 bits (91), Expect = 0.41,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 22/59 (37%), Gaps = 9/59 (15%)

Query: 201 THHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVI 258
               +++     +    N+   R+D  ++SP            T+ R     SDH P+I
Sbjct: 638 QGGEFTW-----NGGHNNQAWARLDKFLVSPSWLDQFSGI---TQSRLPRPISDHFPII 688


>gi|119938530|ref|XP_001257096.1| PREDICTED: DNA-(apurinic or apyrimidinic site) lyase-like,
          partial [Bos taurus]
          Length = 82

 Score = 39.8 bits (91), Expect = 0.41,   Method: Composition-based stats.
 Identities = 6/19 (31%), Positives = 12/19 (63%)

Query: 2  SVVTVATWNVNSIRARIHN 20
          + + + +WNV+ +RA I  
Sbjct: 60 ATLKICSWNVDGLRAWIKK 78


>gi|76818411|ref|YP_335567.1| putative endonuclease/exonuclease/phosphatase family protein
           [Burkholderia pseudomallei 1710b]
 gi|76582884|gb|ABA52358.1| putative Endonuclease/Exonuclease/phosphatase family protein
           [Burkholderia pseudomallei 1710b]
          Length = 1153

 Score = 39.8 bits (91), Expect = 0.41,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 17/46 (36%)

Query: 4   VTVATWNVNSIRARIHNLAAW-----------IKENNPDIICLQET 38
           + +AT+N++        L AW           + E   D+I LQE 
Sbjct: 868 LRIATYNIHG------GLGAWTASAAERIAVVLDELCADVIALQEV 907


>gi|126457011|ref|YP_001075914.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
          pseudomallei 1106a]
 gi|242313530|ref|ZP_04812547.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
          pseudomallei 1106b]
 gi|254194220|ref|ZP_04900652.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
          pseudomallei S13]
 gi|126230779|gb|ABN94192.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
          pseudomallei 1106a]
 gi|169650971|gb|EDS83664.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
          pseudomallei S13]
 gi|242136769|gb|EES23172.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
          pseudomallei 1106b]
          Length = 338

 Score = 39.8 bits (91), Expect = 0.41,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 17/46 (36%)

Query: 4  VTVATWNVNSIRARIHNLAAW-----------IKENNPDIICLQET 38
          + +AT+N++        L AW           + E   D+I LQE 
Sbjct: 53 LRIATYNIHG------GLGAWTASAAERIAVVLDELCADVIALQEV 92


>gi|325687143|gb|EGD29166.1| RgfB protein [Streptococcus sanguinis SK72]
          Length = 271

 Score = 39.8 bits (91), Expect = 0.42,   Method: Composition-based stats.
 Identities = 27/254 (10%), Positives = 63/254 (24%), Gaps = 29/254 (11%)

Query: 18  IHNLAAWIKENNPDIICLQETK--TEDKNFPFETLQSLNYHIETCGQKSYNGVAILS--- 72
           ++ L   I +   D+ICLQE    TE +           Y       + +     L    
Sbjct: 21  LNQLVERILQEKYDVICLQEVNQLTESEQVVQAPF----YQAVEGAIEIHQDHFALCLVE 76

Query: 73  ------KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDD 126
                          +  G D+  +   I +   +  + + +     P           +
Sbjct: 77  KLAEAGLDYHWSWAYNHIGFDIYNEGVAILSRNPMAPREVLVSEANDPTDYHTRKVLLAE 136

Query: 127 KISWIK------RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
                +        L +  +  + E   + A    +        +         +   + 
Sbjct: 137 TEVEGQLLTIASCHLSWWDKGFQGEWAKLEAELLKVKTPLVLMGDFNNPVGQQGYQTILA 196

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
              +   +                 + WD           ++ID++  S      +  + 
Sbjct: 197 SPLKLQDSHAVAREAIGEATVEGTIAGWD------DNKHALKIDYVFTSQGMD--VERSA 248

Query: 241 IDTKPRGWTKPSDH 254
           +    +     SDH
Sbjct: 249 VVFDGKETPVVSDH 262


>gi|321455937|gb|EFX67056.1| hypothetical protein DAPPUDRAFT_115747 [Daphnia pulex]
          Length = 324

 Score = 39.8 bits (91), Expect = 0.42,   Method: Composition-based stats.
 Identities = 21/69 (30%), Positives = 26/69 (37%), Gaps = 16/69 (23%)

Query: 216 SKNKGIR----------IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
            KN G R          ID I  SP+  + L +  +     G    SDH PVI SL I  
Sbjct: 164 PKNLGTRPNPNGKESSTIDLIFSSPDLAN-LTNINV-----GPCWGSDHLPVITSLSIGS 217

Query: 266 PRKKQQDST 274
              K  +  
Sbjct: 218 SPIKTPNVH 226


>gi|260805867|ref|XP_002597807.1| hypothetical protein BRAFLDRAFT_238945 [Branchiostoma floridae]
 gi|229283075|gb|EEN53819.1| hypothetical protein BRAFLDRAFT_238945 [Branchiostoma floridae]
          Length = 254

 Score = 39.8 bits (91), Expect = 0.42,   Method: Composition-based stats.
 Identities = 38/263 (14%), Positives = 80/263 (30%), Gaps = 22/263 (8%)

Query: 8   TWNVNSIRARIH-----NLAAWIKENNPDIICLQETK-TEDKNFPFETLQSLNYH-IETC 60
           TWNV   R          +A  ++    +++ + E++          T + L Y   E  
Sbjct: 4   TWNV---RTMYEAGKTAQIATEMRNYKLEVLGISESRWIGSGQVTLNTGELLLYSGHEEE 60

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
                 GVA++      + +         +               +         G    
Sbjct: 61  NAHHTQGVALMLSKTAQKALIGWEAHGPRILTACFRTERRRINIDIIQCYAPTNEGEDEA 120

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             ++  ++  I +     +  + + +     G+ N   +       +   ND       R
Sbjct: 121 KDEFYSRLLTIIQNRPRRNIVITMGDLNAKVGNNNQGFESIMGKEGLGTMNDNG----ER 176

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
            +     +          H   H  ++     D +++N+   IDHI +  +    L   R
Sbjct: 177 FANMCATSNLVIGGSMFQHKRIHKATWTS--PDGFTENQ---IDHICIGKKFRRSLQDVR 231

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263
           +    RG    SDH  ++ SL +
Sbjct: 232 V---KRGADVSSDHHLLVASLRL 251


>gi|307565860|ref|ZP_07628321.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           amnii CRIS 21A-A]
 gi|307345484|gb|EFN90860.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           amnii CRIS 21A-A]
          Length = 315

 Score = 39.8 bits (91), Expect = 0.43,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 22/60 (36%), Gaps = 21/60 (35%)

Query: 223 IDHIMLSPEATSLLHSARIDTKP---------------------RGWTKPSDHTPVIVSL 261
           +DH ++S    S + S  I+  P                     R  +  SDH P+++ L
Sbjct: 254 LDHFLISLNLLSNIKSCSINDAPFLLEEDMKYGGVKPRRNYNGLRYNSGFSDHLPLVLRL 313


>gi|190575838|ref|YP_001973683.1| putative endonuclease/exonuclease/phosphatase family protein
           [Stenotrophomonas maltophilia K279a]
 gi|190013760|emb|CAQ47395.1| putative endonuclease/exonuclease/phosphatase family protein
           [Stenotrophomonas maltophilia K279a]
          Length = 255

 Score = 39.8 bits (91), Expect = 0.43,   Method: Composition-based stats.
 Identities = 15/96 (15%), Positives = 30/96 (31%), Gaps = 14/96 (14%)

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
             +A    +     ++ +        R       + +F  +  D         IDHI++S
Sbjct: 170 HPNAVLMGDFNCLAERPEMQVLYQKTRLQPPGCIVPTFPSWRPD-------RAIDHILVS 222

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
               +    A            SDH  + + +D+P 
Sbjct: 223 SGLQTRTVEAV-------PAAFSDHLALAMQIDVPA 251


>gi|169838781|ref|ZP_02871969.1| Endonuclease/exonuclease/phosphatase [candidate division TM7
           single-cell isolate TM7a]
          Length = 245

 Score = 39.8 bits (91), Expect = 0.43,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 34/93 (36%), Gaps = 9/93 (9%)

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230
            +    + V   F         +      D  ++ +  D    SW  N    +D I+ S 
Sbjct: 157 KNCKKPVIVAGDFNVFWGEEEIEMFLQASDLKNINTRKDPTFPSW--NPKRELDFILCSK 214

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           E    ++S  +       T+ SDH P+++  DI
Sbjct: 215 EI--KVNSYEVI-----QTQLSDHLPILIDFDI 240


>gi|323350990|ref|ZP_08086647.1| RgfB protein [Streptococcus sanguinis VMC66]
 gi|322122714|gb|EFX94423.1| RgfB protein [Streptococcus sanguinis VMC66]
          Length = 271

 Score = 39.8 bits (91), Expect = 0.43,   Method: Composition-based stats.
 Identities = 29/268 (10%), Positives = 68/268 (25%), Gaps = 26/268 (9%)

Query: 5   TVATWNVNS-------IRARIHNLAAWIKENNPDIICLQETK--TEDKNFPFETLQSLNY 55
              T N +S       I+  ++ LA  I +   D+ICLQE    TE +           Y
Sbjct: 3   KFLTLNTHSWMEEEQEIK--LNQLAERILQEKYDVICLQEVNQLTESEQVVQAPF----Y 56

Query: 56  HIETCGQKSYNGVAILS---------KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
                  + +     L                   +  G D+  +   I +   +  + +
Sbjct: 57  QAVEGAIEIHQDHFALCLVEKLAEAGLDYHWSWAYNHIGFDIYNEGVAILSRKPLTPREV 116

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
            +  +  P           +     +     +      ++                    
Sbjct: 117 LVSEVNDPRDYHTRKVLLAETEVDGQLLTIASCHLSWWDKGFQGEWAKLEEELLKVKTPL 176

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226
           ++  +      +          +   D+     +     +     A        ++ID++
Sbjct: 177 VLMGDFNNPVGQQGYQTILASPLKLQDSHAVAREAIGEATVEGTIAGWDDNKHALKIDYV 236

Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDH 254
             S      +  + +    +     SDH
Sbjct: 237 FTSQGMD--VERSAVVFDGKETPVVSDH 262


>gi|325073605|gb|ADY76659.1| phosphatase [Streptomyces sp. DSM 5940]
          Length = 255

 Score = 39.8 bits (91), Expect = 0.44,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 12/62 (19%)

Query: 2  SVVTVATWNVNS-I------RARIHNL---AAWIKENNPDIICLQETKTEDKNFPFETLQ 51
          +++ +ATWN+   I      R  I +L   A+ + ++ PD++CLQE    D +   E+  
Sbjct: 4  TLLRIATWNMGGGILGESHQRDGIPSLDYYASVLADHRPDVLCLQE--AHDYDGRRESQS 61

Query: 52 SL 53
            
Sbjct: 62 EY 63


>gi|281338309|gb|EFB13893.1| hypothetical protein PANDA_019337 [Ailuropoda melanoleuca]
          Length = 126

 Score = 39.8 bits (91), Expect = 0.44,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 37/110 (33%), Gaps = 12/110 (10%)

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
                 E +     L  M F D  R  H     YSF+     S+S      I+HI+    
Sbjct: 14  KQKINKETKALKDTLYRMDFIDIYRTFHPKPTQYSFFSSAHGSFSG-----IEHILGYKS 68

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
             +      I          SDH  + + L+     K  +++ +  +K I
Sbjct: 69  GFNRYKKIVIIPWI-----FSDHNALKLELN--HKEKFGRNTNTWRLKKI 111


>gi|239942303|ref|ZP_04694240.1| hypothetical protein SrosN15_15000 [Streptomyces roseosporus NRRL
          15998]
 gi|239988768|ref|ZP_04709432.1| hypothetical protein SrosN1_15772 [Streptomyces roseosporus NRRL
          11379]
 gi|291445762|ref|ZP_06585152.1| predicted protein [Streptomyces roseosporus NRRL 15998]
 gi|291348709|gb|EFE75613.1| predicted protein [Streptomyces roseosporus NRRL 15998]
          Length = 255

 Score = 39.8 bits (91), Expect = 0.44,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 12/62 (19%)

Query: 2  SVVTVATWNVNS-I------RARIHNL---AAWIKENNPDIICLQETKTEDKNFPFETLQ 51
          +++ +ATWN+   I      R  I +L   A+ + ++ PD++CLQE    D +   E+  
Sbjct: 4  TLLRIATWNMGGGILGESHQRDGIPSLDYYASVLADHRPDVLCLQE--AHDYDGRRESQS 61

Query: 52 SL 53
            
Sbjct: 62 EY 63


>gi|150866588|ref|XP_001386237.2| hypothetical protein PICST_49245 [Scheffersomyces stipitis CBS
           6054]
 gi|149387844|gb|ABN68208.2| predicted protein [Scheffersomyces stipitis CBS 6054]
          Length = 318

 Score = 39.8 bits (91), Expect = 0.44,   Method: Composition-based stats.
 Identities = 34/252 (13%), Positives = 66/252 (26%), Gaps = 20/252 (7%)

Query: 32  IICLQET-KTEDKNF--------PFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTH 82
           I+CLQE  K +  +         P E  +          +       I  + +   + + 
Sbjct: 65  IVCLQEVYKFQLNDIMKELNRYSPNEDWKYYGVGRIDGMELGEFVPIIYKESEWELVFSD 124

Query: 83  LPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF----- 137
               +           +      +         G+      ++  +  +    +      
Sbjct: 125 SLWLNEKNTRS-SLTGWDAQYPRIVSYVTMKHKGSENYINVFNTHLDHVGEKSKIGSVKL 183

Query: 138 --ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF--TLEVRQSFQKLQNMGFTD 193
              + +     P    GD+N  P            +D     T   R   +K    GF  
Sbjct: 184 IGQTMKSINSWPSFLCGDFNTEPDDAAFKQLEESFSDVSTLSTPFNRYGHEKSSVTGFEG 243

Query: 194 AIRATHDTHHLYSFWD-YYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPS 252
            +         Y F   Y A    K +   ID    + +    L    +     G +  S
Sbjct: 244 EVLLQGGQSIDYIFAPKYTAKMSDKPQCDSIDVNSAANKLFLRLQGFGMLHSKFGGSYMS 303

Query: 253 DHTPVIVSLDIP 264
           DH P++    + 
Sbjct: 304 DHRPIVADFSLS 315


>gi|91080695|ref|XP_975263.1| PREDICTED: similar to carbon catabolite repressor protein
           [Tribolium castaneum]
          Length = 481

 Score = 39.8 bits (91), Expect = 0.44,   Method: Composition-based stats.
 Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 24/94 (25%)

Query: 6   VATWNV------------------NSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNF 45
           V T+NV                  +S++   R +NL A I+  NPDI+CLQE   ++ + 
Sbjct: 119 VMTYNVLAQDLVNQHPYLYALHRKDSLKWDTRWNNLLAEIRNLNPDILCLQEV--QNTHL 176

Query: 46  P--FETLQSLNYHIETCGQKSYNGVAILSKYQPI 77
              F TL +L Y      +           Y+P 
Sbjct: 177 DQYFSTLDTLGYQGLYKQRTGPRTDGCAIYYKPH 210


>gi|46190974|ref|ZP_00120778.2| hypothetical protein Blon03000651 [Bifidobacterium longum DJO10A]
 gi|189440783|ref|YP_001955864.1| metal-dependent hydrolase [Bifidobacterium longum DJO10A]
 gi|312134036|ref|YP_004001375.1| elsh2 [Bifidobacterium longum subsp. longum BBMN68]
 gi|189429218|gb|ACD99366.1| Metal-dependent hydrolase [Bifidobacterium longum DJO10A]
 gi|311773343|gb|ADQ02831.1| ElsH2 [Bifidobacterium longum subsp. longum BBMN68]
          Length = 320

 Score = 39.8 bits (91), Expect = 0.44,   Method: Composition-based stats.
 Identities = 33/258 (12%), Positives = 66/258 (25%), Gaps = 43/258 (16%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTED--KNFPFETLQSLNYHIETCGQ 62
            V T+NV   +A    +   +++   +++ LQET TED  K      ++    + +    
Sbjct: 100 RVMTFNVYKGQADPQAIVELVRDQRVEVLALQET-TEDFVKKLNEAGIEHYLPYAQVSSS 158

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
               G  + S     +                         + + +       G      
Sbjct: 159 DGVFGNGLWSATPLADPTDDDVNSSASFMPGGTVDMGGQQIRFVSVHTTAPVPG------ 212

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                  W +        R   +   IF GD+N         + +               
Sbjct: 213 ---YWRQWKRSLDELGLMREHTDTRYIFMGDFNATYDHTPFRDFL--------------- 254

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
                                 +S+    A +     G  IDH++L           ++ 
Sbjct: 255 ------GDRFVDAARESGHGFTFSWPTNRA-AVPMFAG--IDHVVLDQGM--KAGQCKVV 303

Query: 243 TKPRGWTKPSDHTPVIVS 260
                    SDH  ++ +
Sbjct: 304 KVE-----GSDHAALLAT 316


>gi|147782527|emb|CAN70693.1| hypothetical protein VITISV_041975 [Vitis vinifera]
          Length = 1795

 Score = 39.8 bits (91), Expect = 0.45,   Method: Composition-based stats.
 Identities = 19/195 (9%), Positives = 54/195 (27%), Gaps = 8/195 (4%)

Query: 13   SIRARIHN--LAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYHIETCGQKSYNGVA 69
             + +R     +  +++  N D++ +QET K E    P         +     +  +  + 
Sbjct: 880  GLGSRKKRRVVKDFLRLENXDVVMIQETKKVECDRRPLWLFAXYGPNDPLLRKDFWVELL 939

Query: 70   ILSKYQPIEIVTHLPGDDLDVQARF-----IEATFTINTQTLRIGNLYLPHGNPITSTKY 124
             +     +        + +   +       + ++       +R   L  P       T  
Sbjct: 940  DIFSLSFLLWCVGGDFNVIKRSSEKLGGSSLTSSMKDFBXFIRECELLDPPLRNAPFTWS 999

Query: 125  DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ 184
            + + S + + L       E E     +    +  +  D +  ++  N   +     +   
Sbjct: 1000 NMQESPVCKRLDRFLYSNEWEHHFPQSLQEALPRRTSDHWPIVLETNXFKWGPTPFRFEN 1059

Query: 185  KLQNMGFTDAIRATH 199
                          +
Sbjct: 1060 MWLQHPSFKECFKKN 1074


>gi|325695113|gb|EGD37015.1| RgfB protein [Streptococcus sanguinis SK150]
          Length = 271

 Score = 39.8 bits (91), Expect = 0.45,   Method: Composition-based stats.
 Identities = 28/268 (10%), Positives = 66/268 (24%), Gaps = 26/268 (9%)

Query: 5   TVATWNVNS-------IRARIHNLAAWIKENNPDIICLQETK--TEDKNFPFETLQSLNY 55
              T N +S       I+  ++ L   I +   D+ICLQE    TE +           Y
Sbjct: 3   KFLTLNTHSWMEEGQEIK--LNQLVERILQEKYDVICLQEVNQLTESEQVVQAPF----Y 56

Query: 56  HIETCGQKSYNGVAILS---------KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
                    +     L                   +  G D+  +   I +   + ++ +
Sbjct: 57  QAVEGAIAIHQDNFALCLVEKLAEAGLDYHWSWAYNHIGFDIYNEGVAILSRKPLASREV 116

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
            +     P           +     +     +      ++                    
Sbjct: 117 LVSEANDPRDYHTRKVLLAETEVEGQLLTIASCHLSWWDKGFQGEWAKLEEELLKVKTPL 176

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226
           ++  +      +          +   D+     +     +     A        ++ID++
Sbjct: 177 VLMGDFNNPVGQQGCQTILASPLKLQDSHAVAREAIGEATVEGTIAGWDDNKHALKIDYV 236

Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDH 254
             S      +  + +    +     SDH
Sbjct: 237 FTSQGID--VERSAVVFDGKEIPVVSDH 262


>gi|325859957|ref|ZP_08173084.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           denticola CRIS 18C-A]
 gi|325482483|gb|EGC85489.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           denticola CRIS 18C-A]
          Length = 356

 Score = 39.8 bits (91), Expect = 0.45,   Method: Composition-based stats.
 Identities = 26/256 (10%), Positives = 57/256 (22%), Gaps = 44/256 (17%)

Query: 30  PDIICLQETKTEDKNFPFET-----LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLP 84
           PDI+ L E   E+ +  F+      L+   Y           G+ +   Y P        
Sbjct: 114 PDIVGLCEV--ENDSVLFDLTRRSLLRKARYEYVMTASDDRRGIDVALLYSPFSFRLIKA 171

Query: 85  GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL 144
                     +  T       +      + +G+ +                    +    
Sbjct: 172 DTIHVAPMADMRPTRD-----ILHVEGEIENGDTLHVFLLHAPSRMGGERYSRPFRLYVA 226

Query: 145 EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL 204
                       +           + + A       +       +  +      +     
Sbjct: 227 GLLCQAVDSLRSLYADPRILVMGDFNDYADS--PSVRLLCTRGFVNVSARAHGNNGAKGT 284

Query: 205 YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKP------------------- 245
           Y +      +W       +D I++S      + S  +                       
Sbjct: 285 YRY----HGAWGS-----LDQILVSENLCPWVISCHVHDAAFLLEEDDKYGGVKPRRNYN 335

Query: 246 --RGWTKPSDHTPVIV 259
             R     SDH P+++
Sbjct: 336 GMRYNNGFSDHLPLVL 351


>gi|320170151|gb|EFW47050.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 684

 Score = 39.8 bits (91), Expect = 0.45,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 45/141 (31%), Gaps = 22/141 (15%)

Query: 2   SVVTVATWNV--------NS---------IRA---RIHNLAAWIKENNPDIICLQETKTE 41
           +   V ++N+        NS          RA   R  NL A I    PDI+CLQE    
Sbjct: 255 NKFKVMSYNILANQHFRNNSYLYRWTPSAARAWSYRRANLVAEITALQPDILCLQELD-S 313

Query: 42  DKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI 101
             + P ETL+ L Y      +         + +   +        ++           + 
Sbjct: 314 YHDLP-ETLRHLGYSGRYFKKTGGEATDACAIFVKSDRFAINRVHNVQNFIEGSRVLTSH 372

Query: 102 NTQTLRIGNLYLPHGNPITST 122
           N   L +  + LP    I   
Sbjct: 373 NIGMLAVVTMQLPTAPWIRKM 393


>gi|323463737|gb|ADX75890.1| endonuclease/exonuclease/phosphatase family protein [Staphylococcus
           pseudintermedius ED99]
          Length = 623

 Score = 39.8 bits (91), Expect = 0.45,   Method: Composition-based stats.
 Identities = 14/93 (15%), Positives = 30/93 (32%), Gaps = 10/93 (10%)

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA 232
             +         K                +  YS+  Y  ++ +      +DHI++S   
Sbjct: 526 GDYNDFQWSKPLKTFESYGLTNKVNDVPKNKRYSYV-YQGNTQT------LDHILVSEHL 578

Query: 233 TS--LLHSARIDTKPRGWT-KPSDHTPVIVSLD 262
                L    +++       + SDH P++  +D
Sbjct: 579 KRQTKLDMIHVNSDFTDMAGRASDHDPILAQID 611


>gi|328946822|gb|EGG40959.1| RgfB protein [Streptococcus sanguinis SK1087]
          Length = 271

 Score = 39.8 bits (91), Expect = 0.46,   Method: Composition-based stats.
 Identities = 25/248 (10%), Positives = 62/248 (25%), Gaps = 17/248 (6%)

Query: 18  IHNLAAWIKENNPDIICLQETK--TEDKNFPFETLQSLNYHIETCGQKSYNGVAILS--- 72
           ++ LA  I +   D+ICLQE    TE +           Y       + +     L    
Sbjct: 21  LNQLAERILQEKYDVICLQEVNQLTESEQVVQAPF----YQAVEGAIEIHQDHFALCLVE 76

Query: 73  ------KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDD 126
                          +  G D+  +   I +   +  + + +  +  P           +
Sbjct: 77  KLAEAGLDYHWSWAYNHIGFDIYNEGVAILSRKPLTPREVLVSEVNDPRDYHTRKVLLAE 136

Query: 127 KISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL 186
                +     +      ++                    ++  +      +        
Sbjct: 137 TEVDGQLLTIASCHLSWWDKGFQGEWAKLEEELLKVKTPLVLMGDFNNPVGQQGYQTILA 196

Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR 246
             +   D+     +     +     A        ++ID++  S      +  + +    +
Sbjct: 197 SPLKLQDSHAVAREAIGEATVEGTIAGWDDNKHALKIDYVFTSQGMD--VERSAVVFDGK 254

Query: 247 GWTKPSDH 254
                SDH
Sbjct: 255 ETPVVSDH 262


>gi|224153842|ref|XP_002337404.1| predicted protein [Populus trichocarpa]
 gi|222838981|gb|EEE77332.1| predicted protein [Populus trichocarpa]
          Length = 337

 Score = 39.8 bits (91), Expect = 0.46,   Method: Composition-based stats.
 Identities = 46/279 (16%), Positives = 87/279 (31%), Gaps = 45/279 (16%)

Query: 6   VATWNVNSI--RARIHNLAAWIKENNPDIICLQETKTED-KNFPFETLQSLNYHIETCGQ 62
           +  WNV  +  R +   L    ++ +  I+ + ETK E   +F    +   +        
Sbjct: 11  IIVWNVCGLGGREKKRCLRNLGRKFDLHILGILETKLETLNDFTITAIWGRHPRAWYAVL 70

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
                  IL  + P           ++ +   IE TFT +     +  +Y P+G  + + 
Sbjct: 71  SLGLSGGILCIWNPDLFCVSSCSVAMNGRILHIEGTFTRSNLDCLVSFVYAPNGGNLKNE 130

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
            +   +++     +            +F  D     Q            D C  +E+   
Sbjct: 131 LWTYLVTFRDSVSKPW-CLAGDFNETLFPSDRKGSSQITSSMTRFKNCIDGCNLMELPL- 188

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
                                 +++     ++       RID I +S +      S+   
Sbjct: 189 ------------------NGRKFTW--SRGNA-----ASRIDRIFVSGDWLQTFPSST-- 221

Query: 243 TKPRGWTKP-SDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
               G +K  SDH P+ + LD          ST+   KP
Sbjct: 222 --LFGLSKYSSDHRPLHLLLD----------STNWGPKP 248


>gi|307275377|ref|ZP_07556520.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX2134]
 gi|306508011|gb|EFM77138.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX2134]
 gi|315149596|gb|EFT93612.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecalis TX0012]
          Length = 274

 Score = 39.8 bits (91), Expect = 0.46,   Method: Composition-based stats.
 Identities = 29/243 (11%), Positives = 58/243 (23%), Gaps = 14/243 (5%)

Query: 32  IICLQET--KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLD 89
           II LQE   K   K  P E L +             N   ++ +Y   +   +    ++ 
Sbjct: 34  IIALQEVNQKVASKKVPLEQLTTFCPIATQTPIHEDNFAYLIVQYLAEKGQHYYWSWEMS 93

Query: 90  VQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRL----ELE 145
                I            + +  L        T Y  +   +                  
Sbjct: 94  HIGYAIYEEGNALLSKCPLTSEALLISESQEPTNYRTRKILVAETESSKGTLTVVSGHFS 153

Query: 146 EPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNM------GFTDAIRATH 199
                   +       + Y  +  +           +      +         DA     
Sbjct: 154 WWETPCTGFAYEWLQLEKYLAMGQQPLVILGDLNNPAGTTGYQLVENSYLPIQDAFVVAE 213

Query: 200 DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
           +T    +              +RID+  +S +    +    +    R     SDH  +++
Sbjct: 214 ETSGEATVEKKIDGWEENEAALRIDYAFVSKQW--HVRKYEVIFDGRKTPIVSDHFGLLI 271

Query: 260 SLD 262
            L 
Sbjct: 272 QLK 274


>gi|227546644|ref|ZP_03976693.1| endonuclease/exonuclease/phosphatase [Bifidobacterium longum subsp.
           infantis ATCC 55813]
 gi|322691706|ref|YP_004221276.1| hypothetical protein BLLJ_1517 [Bifidobacterium longum subsp.
           longum JCM 1217]
 gi|227212961|gb|EEI80840.1| endonuclease/exonuclease/phosphatase [Bifidobacterium longum subsp.
           infantis ATCC 55813]
 gi|320456562|dbj|BAJ67184.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           longum JCM 1217]
          Length = 335

 Score = 39.8 bits (91), Expect = 0.46,   Method: Composition-based stats.
 Identities = 33/258 (12%), Positives = 66/258 (25%), Gaps = 43/258 (16%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTED--KNFPFETLQSLNYHIETCGQ 62
            V T+NV   +A    +   +++   +++ LQET TED  K      ++    + +    
Sbjct: 115 RVMTFNVYKGQADPQAIVELVRDQRVEVLALQET-TEDFVKKLNEAGIEHYLPYAQVSSS 173

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
               G  + S     +                         + + +       G      
Sbjct: 174 DGVFGNGLWSATPLADPTDDDVNSSASFMPGGTVDMGGQQIRFVSVHTTAPVPG------ 227

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                  W +        R   +   IF GD+N         + +               
Sbjct: 228 ---YWRQWKRSLDELGLMREHTDTRYIFMGDFNATYDHTPFRDFL--------------- 269

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
                                 +S+    A +     G  IDH++L           ++ 
Sbjct: 270 ------GDRFVDAARESGHGFTFSWPTNRA-AVPMFAG--IDHVVLDQGM--KAGQCKVV 318

Query: 243 TKPRGWTKPSDHTPVIVS 260
                    SDH  ++ +
Sbjct: 319 KVE-----GSDHAALLAT 331


>gi|327461997|gb|EGF08326.1| RgfB protein [Streptococcus sanguinis SK1057]
          Length = 271

 Score = 39.8 bits (91), Expect = 0.46,   Method: Composition-based stats.
 Identities = 25/248 (10%), Positives = 61/248 (24%), Gaps = 17/248 (6%)

Query: 18  IHNLAAWIKENNPDIICLQETK--TEDKNFPFETLQSLNYHIETCGQKSYNGVAILS--- 72
           ++ LA  I +   D+ICLQE    TE +           Y       + +     L    
Sbjct: 21  LNQLAERILQEKYDVICLQEVNQLTESEQVVQAPF----YQAVEGAIEIHRDHFALCLVE 76

Query: 73  ------KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDD 126
                          +  G D+  +   I +   +  + + +     P           +
Sbjct: 77  KLAEAGLDYHWSWAYNHIGFDIYNEGVAILSRNPMAPREVLVSEANDPRDYHTRKVLLAE 136

Query: 127 KISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL 186
                +     +      ++                    ++  +      +        
Sbjct: 137 TEVDGQLLTIASCHLSWWDKGFQGEWAKLEEELLKVKTPLVLMGDFNNPVGQQGYQTILA 196

Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR 246
             +   D+     +     +     A        ++ID++  S      +  + +    +
Sbjct: 197 SPLKLQDSHAVAREAIGEATVEGTIAGWDDNKHALKIDYVFTSQGMD--VERSTVVFDGK 254

Query: 247 GWTKPSDH 254
                SDH
Sbjct: 255 ETPVVSDH 262


>gi|268316715|ref|YP_003290434.1| Endonuclease/exonuclease/phosphatase [Rhodothermus marinus DSM
           4252]
 gi|262334249|gb|ACY48046.1| Endonuclease/exonuclease/phosphatase [Rhodothermus marinus DSM
           4252]
          Length = 370

 Score = 39.8 bits (91), Expect = 0.46,   Method: Composition-based stats.
 Identities = 44/295 (14%), Positives = 69/295 (23%), Gaps = 41/295 (13%)

Query: 6   VATWNV-NSIRARI-HNLAAWIKENNPDIICLQET--------------KTEDKNFPFET 49
           V T+NV  S R  +  +L A +    P +I  QE               +      P   
Sbjct: 93  VMTYNVPESRRPALGDSLQALVLRYRPQLIGFQEVGVWRYEQRGRPSTVRLIGHLRPLVE 152

Query: 50  LQSLNYHIETCGQKSYNG---VAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
            Q   + +    +                  EI     G +  +               +
Sbjct: 153 RQGFRFSVPDPTRGPMFAEVVTLTRLPVVRQEIRLLERGPEGLIYQAVRSELCWAGRLFV 212

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
                   +G         D         R              A    +         P
Sbjct: 213 HYNVRLQSYGPVKPWEVLRDGGWKRPANWRRWLGAYRRAMLQRAAQVRQLRAWIDQEELP 272

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI-RIDH 225
           +I   D   T +        + +     +                A SW   + + RIDH
Sbjct: 273 VILSGDFNSTPDQWFYGWLSRGLQAAGRLGGIA------------APSWPAGRPLVRIDH 320

Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
           +++S E         +          SDH PVI  L     R      T     P
Sbjct: 321 VLVSREW-------EVLGGAVPAAGLSDHRPVIARLRW--RRTSASPGTCPFDAP 366


>gi|226509154|ref|NP_001146094.1| hypothetical protein LOC100279626 [Zea mays]
 gi|219885683|gb|ACL53216.1| unknown [Zea mays]
          Length = 605

 Score = 39.8 bits (91), Expect = 0.46,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 21/54 (38%), Gaps = 6/54 (11%)

Query: 7   ATWNVNSIRARIHNLAAWIKENNPDIICLQETKTED-KNFPFETLQSLNYHIET 59
            TWN      R  NL   I   + DIICLQE +    ++F    L    Y    
Sbjct: 281 LTWN-----YRRQNLLREIIGYHADIICLQEVQVNHFEDFFSPELDKHGYQALY 329


>gi|260805302|ref|XP_002597526.1| hypothetical protein BRAFLDRAFT_157550 [Branchiostoma floridae]
 gi|229282791|gb|EEN53538.1| hypothetical protein BRAFLDRAFT_157550 [Branchiostoma floridae]
          Length = 274

 Score = 39.8 bits (91), Expect = 0.47,   Method: Composition-based stats.
 Identities = 31/251 (12%), Positives = 64/251 (25%), Gaps = 20/251 (7%)

Query: 9   WNVNSIRARIH--NLAAWIKENNPDIICLQETKTED-KNFPFETLQSLNYHIETCGQKSY 65
           WNV ++        +   ++E N +I+ L E +  D   F  +    L           +
Sbjct: 4   WNVRTLYQASKLAQVIKEMEEYNLNILGLSEVRWTDSGKFVSDDKTIL---FSGRQDGIH 60

Query: 66  NGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYD 125
                L   +P            +        T       ++         +    T Y+
Sbjct: 61  RDGVALVLDKPASNALEEWSPINERLLTARFVTNHAKVTIVQCYAPINERDDIHKDTFYE 120

Query: 126 DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQK 185
                + +  R     +  +      G           +      ++    +        
Sbjct: 121 QLQDLVDKTPRHDILVIMGDMNAQIGGSREGFEHTLGPHAFGNRTDNGDRYIHFCSMNNM 180

Query: 186 LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT-SLLHSARIDTK 244
                  +     H   +  ++      + ++     IDHI + P      L   R+   
Sbjct: 181 KIGSSLFE-----HKDIYKITWLSNDHKTRTQ-----IDHIAIGPRWRTPCLQDVRVY-- 228

Query: 245 PRGWTKPSDHT 255
            RG    SDH 
Sbjct: 229 -RGADVGSDHY 238


>gi|115481910|ref|NP_001064548.1| Os10g0401100 [Oryza sativa Japonica Group]
 gi|110289058|gb|ABG66071.1| endonuclease/exonuclease/phosphatase family protein, putative,
           expressed [Oryza sativa Japonica Group]
 gi|113639157|dbj|BAF26462.1| Os10g0401100 [Oryza sativa Japonica Group]
          Length = 411

 Score = 39.8 bits (91), Expect = 0.47,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 7/41 (17%)

Query: 2   SVVTVATWNVNSIR------ARIHNLAAWIKENNPDIICLQ 36
               + T+NV  IR       R+  L   I+ +NPD IC Q
Sbjct: 139 KTFKIMTYNVW-IREDIELHRRLGALGDLIQLHNPDFICFQ 178


>gi|118371231|ref|XP_001018815.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena
           thermophila]
 gi|89300582|gb|EAR98570.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena
           thermophila SB210]
          Length = 345

 Score = 39.8 bits (91), Expect = 0.47,   Method: Composition-based stats.
 Identities = 36/264 (13%), Positives = 78/264 (29%), Gaps = 33/264 (12%)

Query: 2   SVVTVATW--NVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-HIE 58
             + V  W  NV S+ ++ ++L   + +  PD++ L ET  + +    ET    NY  I 
Sbjct: 25  RTIKV--WGANVASLNSKGNDLKELLDQKKPDVVLLNETWLKSE----ETFDDPNYLEIA 78

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
           T   + + G AIL +    +  +       +     I        +   I     P GN 
Sbjct: 79  TDFNQKHQGTAILLRINSSKYYSCYQVSHSNKNLTEIVLRLDPENKIHFISVYAPPQGNE 138

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
               + +  +S     +R        +       +  +               ++  +++
Sbjct: 139 NRDEQREKALSDFYSTVREFKFDQNYKCIGYSDFNARLRKFVDKQDADAKNLLESLKSIK 198

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
           +   +    +        + ++    Y                 ID+             
Sbjct: 199 LNLIYDLKPSSFTRSGTNSKNEASQSY-----------------IDYFFY-RNL--SYKK 238

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
            +I          SDH+ + V + 
Sbjct: 239 FKILDSIGK----SDHSLLEVQIK 258


>gi|150863920|ref|XP_001382566.2| hypothetical protein PICST_30030 [Scheffersomyces stipitis CBS
           6054]
 gi|149385176|gb|ABN64537.2| predicted protein [Scheffersomyces stipitis CBS 6054]
          Length = 320

 Score = 39.8 bits (91), Expect = 0.47,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 68/257 (26%), Gaps = 24/257 (9%)

Query: 8   TWNV--N--SIRARIHNLAAWIKENNPD---IICLQETKTEDKNFPFETLQSLNYHIETC 60
           TWN+  N  S   R   +   I   +     I+ LQE K   KN   + +Q L    +  
Sbjct: 75  TWNLKRNEESWAKRRARVIDCITHCSAHLPTIVGLQEVK---KNQLDDIIQGLGSGWDYF 131

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           G    +G+            +                T+ ++    +    +      I 
Sbjct: 132 GVGRDDGIDKGEFAPIFYKSSEW--------QLVSGTTYWLSETPAKPSKGWDAALPRIV 183

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
           ++         +      +      +         I     D  +      D     +  
Sbjct: 184 TSIIVKHKQSGREIKCMNTHYDHKGKEARNNSSRMIKELASDHSHVCCVLGDFNAEPDHV 243

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
                        A          Y+F   ++   S++    ID+I ++    + +    
Sbjct: 244 AYSILASGNLLDTATNCFKRDGFQYTF-SGFSKEESEST---IDYIWVT--LPARILKFH 297

Query: 241 IDTKPRGWTKPSDHTPV 257
           +          SDH P+
Sbjct: 298 VMNNEFNDRNFSDHRPL 314


>gi|326473513|gb|EGD97522.1| endonuclease/exonuclease/phosphatase [Trichophyton tonsurans CBS
           112818]
          Length = 292

 Score = 39.8 bits (91), Expect = 0.48,   Method: Composition-based stats.
 Identities = 42/300 (14%), Positives = 83/300 (27%), Gaps = 53/300 (17%)

Query: 3   VVTVATWNVN-------------SIRARIHNLAAWIK---ENNPD-IICLQETKTEDKNF 45
           +  + T N+              S+RA   ++   +      NP+  +CLQE        
Sbjct: 7   LFRILTHNIRYATTSPSAGEQPWSVRA--PHIVNELDYHSRLNPESFVCLQE--ALHNQV 62

Query: 46  PF------------ETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR 93
                         ET Q   Y +     K     + +     +  +       L     
Sbjct: 63  TDVLAGLNSRPHAAETDQWAYYGVGRDDGKQAGEYSPIFYRPAVWTLQEKETVWLSETPS 122

Query: 94  FIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGD 153
                +   +  +    ++    + IT    +  +       RF S +L L     +   
Sbjct: 123 VPSKGWDAASIRIVTIGVFNHKSSNITVLAMNTHLDDQGSKSRFESAKLILSLIQKYLAR 182

Query: 154 YNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD 213
                + +                E  +    + +          +     ++ +D    
Sbjct: 183 -YPEVKGNFLAGDFNSIESQEAYREFTKPGSSIVDTYKKVPAAQHYGDEITFTGFD---- 237

Query: 214 SWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP----------SDHTPVIVSLDI 263
              K KG RID++M+ P+      SA I     G+             SDH  V+  + +
Sbjct: 238 --GKTKGSRIDYVMVGPQ---SCSSASIPFTVNGYAVMPNRFDNRIYNSDHRAVVADITL 292


>gi|307725679|ref|YP_003908892.1| endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1003]
 gi|307586204|gb|ADN59601.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1003]
          Length = 258

 Score = 39.8 bits (91), Expect = 0.48,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 11/43 (25%)

Query: 4  VTVATWNVNSI------R--ARIHNLAAWIKENNPDIICLQET 38
          + + T+N++        R  ARI   A  I   N D++ LQE 
Sbjct: 34 LRIVTYNIHGAVGTDGKRSGARI---AEVISALNADVVALQEV 73


>gi|115948334|ref|XP_001179619.1| PREDICTED: similar to bucentaur [Strongylocentrotus purpuratus]
 gi|115974782|ref|XP_001180110.1| PREDICTED: similar to bucentaur [Strongylocentrotus purpuratus]
          Length = 320

 Score = 39.8 bits (91), Expect = 0.48,   Method: Composition-based stats.
 Identities = 36/266 (13%), Positives = 88/266 (33%), Gaps = 21/266 (7%)

Query: 8   TWNVNSIRA-RIHNLAAWIKENNPDIICLQETKTED-KNFPFETLQSLNYHIETCGQKSY 65
           TWN  +IR  +I  +   ++  N +++ L E +  D  +   +  +     I + G+   
Sbjct: 47  TWNTRTIRDDKIETIKREMQRYNMNLLALTEIRWLDSGDLMSDEFKV----IYSEGKVRQ 102

Query: 66  NGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYD 125
            GVA+L   Q  +           V  R +      +   + +  +Y+P  +       D
Sbjct: 103 RGVALLLDKQTAK----NVCRIKAVSDRPLAVRIKGSPVDIVVLVVYMPPSDYEDKDVED 158

Query: 126 DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQK 185
                 +   +    R+ L +     G      +  D  +             + Q  ++
Sbjct: 159 IYDMIDEELEKGNDYRILLGDWNAVVGS---SHKHDDAVDEWGLGRQNHRGNMLVQFCKR 215

Query: 186 LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKP 245
            + +               Y++      +  +     ID+I+++    + +  +      
Sbjct: 216 RKLVVINTLFEQHPRYTRRYTWKAPGDTARYQ-----IDYILVNQRYKNSVKKSLAYP-- 268

Query: 246 RGWTKPSDHTPVIVSLDIPEPRKKQQ 271
            G    SDH  V++++ +   + +  
Sbjct: 269 -GADCDSDHNLVMMTVQLNLKKMRGS 293


>gi|295680429|ref|YP_003609003.1| endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1002]
 gi|295440324|gb|ADG19492.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1002]
          Length = 250

 Score = 39.8 bits (91), Expect = 0.48,   Method: Composition-based stats.
 Identities = 8/40 (20%), Positives = 17/40 (42%), Gaps = 5/40 (12%)

Query: 4  VTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQET 38
          + + T+N++       +     +   + E + DI  LQE 
Sbjct: 22 LRIGTYNLHGAVGIDGKFAPKRIGDVLTEIDADIFALQEV 61


>gi|212547123|ref|XP_002153714.1| reverse transcriptase, putative [Penicillium marneffei ATCC 18224]
 gi|210064370|gb|EEA18467.1| reverse transcriptase, putative [Penicillium marneffei ATCC 18224]
          Length = 614

 Score = 39.8 bits (91), Expect = 0.48,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 21/57 (36%), Gaps = 5/57 (8%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKP-SDHTPVIVSLDIPEPRKKQQDSTSQNM 278
           ID   LS    + L    I  +     +  SDH P+   LDI  P K+     +   
Sbjct: 72  IDLTFLSGSLFNRL----ILIERADSVQHDSDHWPIQTQLDIDTPTKEPPKRRNWAA 124


>gi|299144741|ref|ZP_07037809.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 3_1_23]
 gi|298515232|gb|EFI39113.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. 3_1_23]
          Length = 611

 Score = 39.8 bits (91), Expect = 0.48,   Method: Composition-based stats.
 Identities = 33/278 (11%), Positives = 77/278 (27%), Gaps = 58/278 (20%)

Query: 3   VVTVATWNV---NSIRARIH------NLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
            + + T+N+   N     +        +A  I   +PD++ +Q                 
Sbjct: 25  TLRLMTYNIKNANG----MDDICSFQRVANVINNASPDVVAIQ----------------- 63

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
              +++  ++S     +    +  ++             ++           LR+  + L
Sbjct: 64  --EVDSMTRRSRQKYVLGEIAERTQMHACFAPAIEFEGGKYGIG-LLTKQVPLRLQTIPL 120

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
           P      +    +   +I      +    +  + L          +        +     
Sbjct: 121 PGREEARTLILAEFEDYIYCCTHLSLTEEDRMKSLEIVKSLIASYKKPLFLAGDMNAEPE 180

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
              ++  Q   ++ +        A                         ID+I  S +  
Sbjct: 181 SDFIKELQKDFQILSNPEKHTYPAPAPKET-------------------IDYIAASKQNA 221

Query: 234 S--LLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKK 269
           +   + SAR+  +P      SDH P++V L   E   K
Sbjct: 222 TGFAVISARVVNEPM----ASDHRPILVELRTAEKADK 255


>gi|294506837|ref|YP_003570895.1| hypothetical protein SRM_01022 [Salinibacter ruber M8]
 gi|294343165|emb|CBH23943.1| conserved hypothetical protein [Salinibacter ruber M8]
          Length = 445

 Score = 39.8 bits (91), Expect = 0.48,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 5/44 (11%)

Query: 220 GIRIDHIMLSPEATSLLHSARIDTKP--RGWTKP-SDHTPVIVS 260
           G RID+++  P AT  +  A +      R    P SDH PV V 
Sbjct: 399 GARIDYVL--PAATVAVDDAGVWRPAPARVPDVPVSDHFPVWVD 440


>gi|125574717|gb|EAZ16001.1| hypothetical protein OsJ_31445 [Oryza sativa Japonica Group]
          Length = 293

 Score = 39.8 bits (91), Expect = 0.48,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 7/41 (17%)

Query: 2  SVVTVATWNVNSIR------ARIHNLAAWIKENNPDIICLQ 36
              + T+NV  IR       R+  L   I+ +NPD IC Q
Sbjct: 21 KTFKIMTYNVW-IREDIELHRRLGALGDLIQLHNPDFICFQ 60


>gi|319790707|ref|YP_004152347.1| endonuclease/exonuclease/phosphatase [Variovorax paradoxus EPS]
 gi|315593170|gb|ADU34236.1| Endonuclease/exonuclease/phosphatase [Variovorax paradoxus EPS]
          Length = 262

 Score = 39.8 bits (91), Expect = 0.49,   Method: Composition-based stats.
 Identities = 31/286 (10%), Positives = 63/286 (22%), Gaps = 63/286 (22%)

Query: 2   SVVTVATWNVN-SIRA-----RIHNLAAWIKENNPDIICLQET---------KTE--DKN 44
           + + V T N +    A      +  L   ++    D++ LQE          K       
Sbjct: 16  TSLKVMTVNTHKGFTALNRKFILPELRDAVRTVGADVVFLQEVLGTHSRHSRKVSNWPDA 75

Query: 45  FPFETLQS-------LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA 97
             +E L            +         N V                             
Sbjct: 76  PHYEFLADTMWPQFAYGRNAVYPKGHHGNAVLSKFPIVHFRNHDVSVSGPEKRGLLHCVL 135

Query: 98  TFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII 157
                T  + +   +L         + +     ++  +   +  +   +   + G  + +
Sbjct: 136 RLPGRTVDVHVICAHLGLAEAHRQQQLELLCHIVRDEVPADAPLIVAGDFNDWRGRAHEV 195

Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK 217
                               EV           F            +Y           +
Sbjct: 196 L------------EKGADLREVFVHANGRAARTFPSRFPLL-PLDRIY----------VR 232

Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           N G                  A +    R W+  SDH P++  +D+
Sbjct: 233 NAG----------------VHAPVVLPRRPWSHLSDHAPLVADIDL 262


>gi|295689833|ref|YP_003593526.1| endonuclease/exonuclease/phosphatase [Caulobacter segnis ATCC
           21756]
 gi|295431736|gb|ADG10908.1| Endonuclease/exonuclease/phosphatase [Caulobacter segnis ATCC
           21756]
          Length = 283

 Score = 39.8 bits (91), Expect = 0.49,   Method: Composition-based stats.
 Identities = 31/270 (11%), Positives = 68/270 (25%), Gaps = 29/270 (10%)

Query: 6   VATWNV---N-----SIRARIHNLAAWIKENNPDIICLQETKTE-DKNFPFETLQSLNYH 56
           V ++N+   N       R R   +A  I   +PDI+ +QE       +         +Y 
Sbjct: 32  VMSYNIRYDNPEDRPDWRMRREPMARQISFFSPDILGVQEALVPMVADLSAALPGYAHYG 91

Query: 57  I--ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           +  +   +            +   ++          +         +     R+      
Sbjct: 92  VGRDDGDKAGETTTIFYRSARFERLLAQTRWCSPTPERPGKAYDAALPRTYARVVLR--- 148

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
                     D     +          +  E   + A      P        ++ + ++ 
Sbjct: 149 ----------DRASGVLLDVRNAHLDHVGAESRRLCARQLRDQPTWPGARLVVLGDFNSA 198

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
                        +        +        +F D+   +        ID++ +      
Sbjct: 199 PGEPPHDVLTSGGDGLRDARAASPIVFGPAGTFNDFSPGAPPVGP---IDYVFVDRAL-- 253

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
            +      T   G    SDH P+IV +  P
Sbjct: 254 QVLRFATLTDTEGGVAISDHFPIIVQIAAP 283


>gi|156387622|ref|XP_001634302.1| predicted protein [Nematostella vectensis]
 gi|156221383|gb|EDO42239.1| predicted protein [Nematostella vectensis]
          Length = 149

 Score = 39.8 bits (91), Expect = 0.49,   Method: Composition-based stats.
 Identities = 16/122 (13%), Positives = 36/122 (29%), Gaps = 9/122 (7%)

Query: 149 IFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFW 208
                       ++               E       L  +  T  +      H   ++ 
Sbjct: 5   DMNAKVGDQNWDYERVMGKHGLGVRNDDGERLCELCDLNELVITGTLFPHRTLHKA-TWI 63

Query: 209 DYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268
               D  +KN+   IDH++++    + +   R+    R     SDH  V  ++ +   + 
Sbjct: 64  S--PDGKTKNQ---IDHVLVNTRFRNSVKDTRVF---RSADVGSDHYLVCATVKLRLRKD 115

Query: 269 KQ 270
            +
Sbjct: 116 PK 117


>gi|291516299|emb|CBK69915.1| Metal-dependent hydrolase [Bifidobacterium longum subsp. longum F8]
          Length = 320

 Score = 39.8 bits (91), Expect = 0.50,   Method: Composition-based stats.
 Identities = 33/258 (12%), Positives = 66/258 (25%), Gaps = 43/258 (16%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTED--KNFPFETLQSLNYHIETCGQ 62
            V T+NV   +A    +   +++   +++ LQET TED  K      ++    + +    
Sbjct: 100 RVMTFNVYKGQADPQAIVELVRDQRVEVLALQET-TEDFVKKLNEAGIEHYLPYAQVSSS 158

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
               G  + S     +                         + + +       G      
Sbjct: 159 DGVFGNGLWSATPLADPTDDDVNSSASFMPGGTVDMGGQQIRFVSVHTTAPVPG------ 212

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                  W +        R   +   IF GD+N         + +               
Sbjct: 213 ---YWRQWKRSLDELGLMREHTDTRYIFMGDFNATYDHTPFRDFL--------------- 254

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
                                 +S+    A +     G  IDH++L           ++ 
Sbjct: 255 ------GDRFVDAARESGHGFTFSWPTNRA-AVPMFAG--IDHVVLDQGM--KAGQCKVV 303

Query: 243 TKPRGWTKPSDHTPVIVS 260
                    SDH  ++ +
Sbjct: 304 KVE-----GSDHAALLAT 316


>gi|156357354|ref|XP_001624185.1| predicted protein [Nematostella vectensis]
 gi|156210945|gb|EDO32085.1| predicted protein [Nematostella vectensis]
          Length = 681

 Score = 39.8 bits (91), Expect = 0.50,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 20/44 (45%), Gaps = 5/44 (11%)

Query: 6  VATWNVNSIRARIHNLAAWI--KENNPD--IICLQETKTEDKNF 45
          + TWNVN  ++ +  L  W+   +  PD  ++  QE     +  
Sbjct: 18 IGTWNVNG-KSPVEGLGPWLTCDDEAPDVVVVGFQELDLSTEAL 60


>gi|291441787|ref|ZP_06581177.1| polynucleotide adenyltransferase [Streptomyces ghanaensis ATCC
           14672]
 gi|291344682|gb|EFE71638.1| polynucleotide adenyltransferase [Streptomyces ghanaensis ATCC
           14672]
          Length = 973

 Score = 39.8 bits (91), Expect = 0.50,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 11/45 (24%)

Query: 4   VTVATWN----------VNSIRARIHNLAAWIKENNPDIICLQET 38
           + V TWN          +++ R R   L A +++ + D+I LQE 
Sbjct: 148 LRVLTWNTLWDRYDSDRIDTAR-RRPLLLAALEDADADVIALQEV 191


>gi|239933421|ref|ZP_04690374.1| polynucleotide adenyltransferase [Streptomyces ghanaensis ATCC
           14672]
          Length = 947

 Score = 39.8 bits (91), Expect = 0.50,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 11/45 (24%)

Query: 4   VTVATWN----------VNSIRARIHNLAAWIKENNPDIICLQET 38
           + V TWN          +++ R R   L A +++ + D+I LQE 
Sbjct: 122 LRVLTWNTLWDRYDSDRIDTAR-RRPLLLAALEDADADVIALQEV 165


>gi|229143782|ref|ZP_04272202.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST24]
 gi|228639657|gb|EEK96067.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST24]
          Length = 788

 Score = 39.8 bits (91), Expect = 0.50,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 22/44 (50%), Gaps = 3/44 (6%)

Query: 223 IDHIMLSPEATSL--LHSARIDTKPRGWT-KPSDHTPVIVSLDI 263
           +DHI+++        + S  +++       + SDH PV+  +D+
Sbjct: 741 LDHILVTNNIAPHTIVDSVHLNSNIMKEHGRVSDHDPVLAQIDL 784


>gi|42523979|ref|NP_969359.1| hypothetical protein Bd2555 [Bdellovibrio bacteriovorus HD100]
 gi|39576187|emb|CAE80352.1| hypothetical protein Bd2555 [Bdellovibrio bacteriovorus HD100]
          Length = 343

 Score = 39.8 bits (91), Expect = 0.50,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 27/73 (36%), Gaps = 18/73 (24%)

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLH--SARIDTK----------PRGWTK--- 250
           +F+     S +   G +ID + + P     L   SA +             PR       
Sbjct: 268 TFYQVRNSSRAD--GRQIDFVFIPPLLHPYLKPASAHVHRYKDEFGMAHDIPRNMDAKLS 325

Query: 251 -PSDHTPVIVSLD 262
            PSDH P++  ++
Sbjct: 326 LPSDHYPLVFEIE 338


>gi|319893216|ref|YP_004150091.1| Endonuclease/Exonuclease/phosphatase family protein [Staphylococcus
           pseudintermedius HKU10-03]
 gi|317162912|gb|ADV06455.1| Endonuclease/Exonuclease/phosphatase family protein [Staphylococcus
           pseudintermedius HKU10-03]
          Length = 623

 Score = 39.4 bits (90), Expect = 0.51,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 28/66 (42%), Gaps = 10/66 (15%)

Query: 200 DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS--LLHSARIDTKPRGWT-KPSDHTP 256
             +  YS+  Y  ++ +      +DHI++S        L    +++       + SDH P
Sbjct: 553 PKNKRYSYV-YQGNTQT------LDHILVSEHLKRQTKLDMIHVNSDFTDMAGRASDHDP 605

Query: 257 VIVSLD 262
           ++  +D
Sbjct: 606 ILAQID 611


>gi|301121032|ref|XP_002908243.1| carbon catabolite repressor protein, putative [Phytophthora
           infestans T30-4]
 gi|262103274|gb|EEY61326.1| carbon catabolite repressor protein, putative [Phytophthora
           infestans T30-4]
          Length = 1180

 Score = 39.4 bits (90), Expect = 0.51,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 1/44 (2%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTED-KNFPFETLQSLNYHIET 59
           R   L   ++  N DIICLQE + +  K+F    ++   Y    
Sbjct: 281 RRELLKRELQSYNADIICLQEVQGDHYKSFFAPMMEEWGYEGWY 324


>gi|298204359|gb|ADI61828.1| endonuclease-reverse transcriptase [Bombyx mori]
          Length = 1011

 Score = 39.4 bits (90), Expect = 0.51,   Method: Composition-based stats.
 Identities = 28/273 (10%), Positives = 71/273 (26%), Gaps = 22/273 (8%)

Query: 5   TVATWNVNSIRARIHNLAAWIKEN--NPD--IICLQETKTEDKNFPFETLQSLNYHIETC 60
            + TWNV  +          ++      D  I  L ET   +           +    + 
Sbjct: 63  KIGTWNVRGL--LKPGKIDIVEGEVTKCDLCICGLSETHWRNSG---HFFTENHAVYFSG 117

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
                     +   +  +          D           +N   +++          + 
Sbjct: 118 NDNDSQNGVAILVPRHRKNCVIGYEPVSDRIISMKLKASPVNLNLIQVYAPTSTALPEVL 177

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
              Y +    I +        +  +       + N+    ++               E  
Sbjct: 178 ENFYRELQIVIAKVPNRELLVIMGDFNSKIGANSNL----YNNCVGKFGLGLRNERGERL 233

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
             F     +   +++   H    LY++         +N+   ID+I++     + + +A 
Sbjct: 234 MRFANENGLTVANSLFQHHPR-RLYTWTS--PGGKHRNQ---IDYILIRSRWRTSVLNAH 287

Query: 241 IDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDS 273
                 G    SDH  ++  + +     +   +
Sbjct: 288 TLP---GACCGSDHELLVAKIRLKLKAARSPRA 317


>gi|147777454|emb|CAN73833.1| hypothetical protein VITISV_034783 [Vitis vinifera]
          Length = 1168

 Score = 39.4 bits (90), Expect = 0.51,   Method: Composition-based stats.
 Identities = 15/166 (9%), Positives = 44/166 (26%), Gaps = 7/166 (4%)

Query: 94  FIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGD 153
                 T+    L +G   +               + +        +    EE     G 
Sbjct: 576 ICWDKRTLELMELEVGCFSISCRMRNVEDGRVWMFTGVYGPFSKEEREWMWEELGAIRGI 635

Query: 154 YNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD 213
           +         +N  +   +      +  + ++   +     +        + ++    + 
Sbjct: 636 WEDPWCIGGDFNVTLSLRERSNQGRLTSAMRRFAQVVDELELIDLPLQGGMLTW----SG 691

Query: 214 SWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
             +     R+D  +++       +       PR     SDH P+++
Sbjct: 692 GRNNQAWARLDRFLVTQGWLDHFNEVVQCRLPR---PTSDHFPIVL 734


>gi|322689757|ref|YP_004209491.1| hypothetical protein BLIF_1575 [Bifidobacterium longum subsp.
           infantis 157F]
 gi|320461093|dbj|BAJ71713.1| conserved hypothetical protein [Bifidobacterium longum subsp.
           infantis 157F]
          Length = 335

 Score = 39.4 bits (90), Expect = 0.52,   Method: Composition-based stats.
 Identities = 33/258 (12%), Positives = 66/258 (25%), Gaps = 43/258 (16%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTED--KNFPFETLQSLNYHIETCGQ 62
            V T+NV   +A    +   +++   +++ LQET TED  K      ++    + +    
Sbjct: 115 RVMTFNVYKGQADPQAIVELVRDQRVEVLALQET-TEDFVKKLNEAGIEHYLPYAQVSSS 173

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
               G  + S     +                         + + +       G      
Sbjct: 174 DGVFGNGLWSATPLADPTDDDVNSSASFMPGGTVDMGGQQIRFVSVHTTAPVPG------ 227

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                  W +        R   +   IF GD+N         + +               
Sbjct: 228 ---YWRQWKRSLDELGLMREHTDTRYIFMGDFNATYDHTPFRDFL--------------- 269

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
                                 +S+    A +     G  IDH++L           ++ 
Sbjct: 270 ------GDRFVDAARESGHGFTFSWPTNRA-AVPMFAG--IDHVVLDQGM--KAGQCKVV 318

Query: 243 TKPRGWTKPSDHTPVIVS 260
                    SDH  ++ +
Sbjct: 319 KVE-----GSDHAALLAT 331


>gi|270005856|gb|EFA02304.1| hypothetical protein TcasGA2_TC007970 [Tribolium castaneum]
          Length = 505

 Score = 39.4 bits (90), Expect = 0.52,   Method: Composition-based stats.
 Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 24/94 (25%)

Query: 6   VATWNV------------------NSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNF 45
           V T+NV                  +S++   R +NL A I+  NPDI+CLQE   ++ + 
Sbjct: 143 VMTYNVLAQDLVNQHPYLYALHRKDSLKWDTRWNNLLAEIRNLNPDILCLQEV--QNTHL 200

Query: 46  P--FETLQSLNYHIETCGQKSYNGVAILSKYQPI 77
              F TL +L Y      +           Y+P 
Sbjct: 201 DQYFSTLDTLGYQGLYKQRTGPRTDGCAIYYKPH 234


>gi|225453594|ref|XP_002266993.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 453

 Score = 39.4 bits (90), Expect = 0.52,   Method: Composition-based stats.
 Identities = 17/118 (14%), Positives = 39/118 (33%), Gaps = 7/118 (5%)

Query: 143 ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH 202
             EE     G +         +N + +  +      +    ++   +     +R    T 
Sbjct: 113 FWEELRAIRGLWEDPWCIGGDFNIVRFLKERRNAPRLTTEMRRFSEVIRDLGLRDFPLTG 172

Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
             +++        +     R+DH ++S +      +    T PR     SDH P+++ 
Sbjct: 173 GHFTW----IGGLNSQAASRLDHFLVSDQWKDHFSAITQSTLPR---LVSDHNPIVLE 223


>gi|54023631|ref|YP_117873.1| hypothetical protein nfa16630 [Nocardia farcinica IFM 10152]
 gi|54015139|dbj|BAD56509.1| hypothetical protein [Nocardia farcinica IFM 10152]
          Length = 329

 Score = 39.4 bits (90), Expect = 0.52,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 22/59 (37%), Gaps = 12/59 (20%)

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
           ++      +W    G  IDH++++      + S  I          SDH  V   L +P
Sbjct: 282 TWPADR--AWGPVIG--IDHVLVADGGAGRVESITI--------PGSDHRAVYAELRLP 328


>gi|67526289|ref|XP_661206.1| hypothetical protein AN3602.2 [Aspergillus nidulans FGSC A4]
 gi|74596539|sp|Q5B778|CCR4_EMENI RecName: Full=Glucose-repressible alcohol dehydrogenase
           transcriptional effector; AltName: Full=Carbon
           catabolite repressor protein 4; AltName:
           Full=Cytoplasmic deadenylase
 gi|40740620|gb|EAA59810.1| hypothetical protein AN3602.2 [Aspergillus nidulans FGSC A4]
 gi|259481873|tpe|CBF75800.1| TPA: Glucose-repressible alcohol dehydrogenase transcriptional
           effector (EC 3.1.13.4)(Carbon catabolite repressor
           protein 4)(Cytoplasmic deadenylase)
           [Source:UniProtKB/Swiss-Prot;Acc:Q5B778] [Aspergillus
           nidulans FGSC A4]
          Length = 675

 Score = 39.4 bits (90), Expect = 0.52,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 5/34 (14%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQET 38
            V +W       R   +   ++ ++PDIICLQE 
Sbjct: 333 RVLSW-----EFRRETILNELRAHDPDIICLQEI 361


>gi|329934913|ref|ZP_08284954.1| putative membrane protein [Streptomyces griseoaurantiacus M045]
 gi|329305735|gb|EGG49591.1| putative membrane protein [Streptomyces griseoaurantiacus M045]
          Length = 346

 Score = 39.4 bits (90), Expect = 0.52,   Method: Composition-based stats.
 Identities = 45/261 (17%), Positives = 72/261 (27%), Gaps = 47/261 (18%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTED-KNFPFETLQSLNYHIETCGQ 62
           +TVAT NVN+  A     A  I     D++ LQE K      +      +  YH      
Sbjct: 129 LTVATHNVNASNADPSGTAREIAVAGADVLALQELKASAVPTYERLLEPTYKYHAVV--- 185

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
                V + SK+    + T           R + AT T     L +   +LP        
Sbjct: 186 ---GTVGLWSKFPMSGVRTVDIRLGW---KRAMRATVTTPDGPLAVYVAHLPSVRVKLRA 239

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
            +  +          A+   E +  ++   D N                     +     
Sbjct: 240 GFTARERDRSADALGAAIAHEKQSRVVLLADANGTMNDRALTAVTSQMRSTQGAVGSGF- 298

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
                                 +S+   +  +       RID IM+         S+   
Sbjct: 299 ---------------------GFSWPASFPMA-------RIDQIMV-KGVKP--VSSWTL 327

Query: 243 TKPRGWTKPSDHTPVIVSLDI 263
            K       SDH P+   L +
Sbjct: 328 PKT-----GSDHLPIAARLQL 343


>gi|115745149|ref|XP_001203234.1| PREDICTED: similar to endonuclease/reverse transcriptase
           [Strongylocentrotus purpuratus]
 gi|115914182|ref|XP_001177305.1| PREDICTED: similar to endonuclease/reverse transcriptase
           [Strongylocentrotus purpuratus]
          Length = 858

 Score = 39.4 bits (90), Expect = 0.53,   Method: Composition-based stats.
 Identities = 38/270 (14%), Positives = 76/270 (28%), Gaps = 46/270 (17%)

Query: 5   TVAT-WNVN--SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
            V T  NVN  SIRA+  + A  I ++NPD++   E+   +     E   + +Y+IE   
Sbjct: 137 KVLTILNVNCQSIRAKKQSFAILIHQHNPDVVIGTESWLTEDIRSSEVFPTDHYNIERRD 196

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
           + +                 H        +         + T    I       G     
Sbjct: 197 RPNDP---------------HGGVFLAIRKDLLASREIELETDCELIWCKISMPGAKTLH 241

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
                +            +R              + P         +      +  +   
Sbjct: 242 VAAFYRPHEGDEMSLTELER----------SLSRLSPTHSVVIGGDLNLPGWDWRNQQVG 291

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           + +         ++   H    + +       +  +N    +D +++S           +
Sbjct: 292 NCRYPNLHRRLGSLLDDHGLTQVVT-----EPTRYQNT---LDLLLVSNP--------TV 335

Query: 242 DTKPRGWTKPSDH-TPVIVSLDIPEPRKKQ 270
             +       SDH  P+ V LD+   R+ Q
Sbjct: 336 VNEVTVVPGVSDHDCPL-VKLDVRPTRRHQ 364


>gi|1448963|gb|AAB04627.1| reverse transcriptase [Chironomus tentans]
          Length = 755

 Score = 39.4 bits (90), Expect = 0.53,   Method: Composition-based stats.
 Identities = 29/270 (10%), Positives = 59/270 (21%), Gaps = 42/270 (15%)

Query: 9   WNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGV 68
           WN N +  ++     ++     D+ C+ ET  +    P   + S   ++     +     
Sbjct: 12  WNANGLTDKMLAFLDYLSTQKVDVACISETFLK----PNSKIDSHPDYVIHRFDRVDRPK 67

Query: 69  AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKI 128
             ++      +   L           I     I              G            
Sbjct: 68  GGVAIIVKRNLKHQLQPSYNTKLMECIGIKVFITDSVSCHILSVYLPGGSKGKEIDQHLR 127

Query: 129 SWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN 188
             I +                  GD+N   +  +C       N A   L+       +  
Sbjct: 128 DDINKITNIRG-------NYYICGDFNAKHREWNCNV----ANKAGTILQDMSGEFMIYY 176

Query: 189 MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGW 248
                                             ID ++ +    +   +          
Sbjct: 177 PDSPTYYPEDPKKSEST-----------------IDLMLSNSNLETTELNCT-------- 211

Query: 249 TKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278
              SDH  V     I   +  + ++T    
Sbjct: 212 EAMSDHCAVY--FQIKTSKIDRTENTVYRY 239


>gi|329115285|ref|ZP_08244040.1| Hypothetical protein APO_2103 [Acetobacter pomorum DM001]
 gi|326695728|gb|EGE47414.1| Hypothetical protein APO_2103 [Acetobacter pomorum DM001]
          Length = 139

 Score = 39.4 bits (90), Expect = 0.53,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 11/57 (19%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRG-------WTKPSDHTPVIVSLDIPEPRKKQQD 272
           IDHI+L   A +     +I    R            SDH PV ++L +P  +++ Q 
Sbjct: 87  IDHIILGGAARAW----KIPNSLRVTPLAEEVGQTLSDHCPVSITLQLPSAKEQPQP 139


>gi|325568346|ref|ZP_08144713.1| RgfB protein [Enterococcus casseliflavus ATCC 12755]
 gi|325158115|gb|EGC70268.1| RgfB protein [Enterococcus casseliflavus ATCC 12755]
          Length = 276

 Score = 39.4 bits (90), Expect = 0.54,   Method: Composition-based stats.
 Identities = 36/286 (12%), Positives = 73/286 (25%), Gaps = 45/286 (15%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKEN---------------NPDIICLQETK--------T 40
           + V T N +S          W++EN               + DII LQE           
Sbjct: 1   MKVLTLNTHS----------WLEENQLEKCKMIAQEIATGDYDIIALQEVNQTIAAQTIV 50

Query: 41  EDKNF-PFE---TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIE 96
            D  + P +    ++  N+ +    +           +    +   +  +   + ++   
Sbjct: 51  PDGLYCPTDTLVEIKEDNFALRLVEELQLLDCDYYWSWTYSHVGYDIYHEGNALLSKQPI 110

Query: 97  ATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI 156
                          +    N    T+ D +I  +        Q  +          +  
Sbjct: 111 IAKEYLASQATDVWDHTTRKNLSGVTEADGQIVQVVSCHFSWWQDGKFAYEWQQTEAFLA 170

Query: 157 IPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS 216
                         + A    ++           F  A   T +   +        D W 
Sbjct: 171 ERADTLLILGDFNNDAASSGHQLVLDSSLQLQDSFLTAAETTGEASVV-----KAIDGWQ 225

Query: 217 KNK-GIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
            N+  +RID++  S +         +          SDH  + V  
Sbjct: 226 DNREALRIDYVFASKDL--QATEYEVVFDGTRTPIVSDHFGIKVVF 269


>gi|321453655|gb|EFX64870.1| hypothetical protein DAPPUDRAFT_333741 [Daphnia pulex]
          Length = 176

 Score = 39.4 bits (90), Expect = 0.54,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 2/37 (5%)

Query: 4  VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQET 38
          + V + N+  I    R+  L  +   N  D+ICLQE 
Sbjct: 1  MKVTSINIARISTPERLQLLLNYCVSNEFDVICLQEV 37


>gi|223985092|ref|ZP_03635188.1| hypothetical protein HOLDEFILI_02493 [Holdemania filiformis DSM
          12042]
 gi|223962914|gb|EEF67330.1| hypothetical protein HOLDEFILI_02493 [Holdemania filiformis DSM
          12042]
          Length = 662

 Score = 39.4 bits (90), Expect = 0.54,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 3/39 (7%)

Query: 2  SVVTVATWNVNSIRAR--IHNLAAWIKENNPDIICLQET 38
          + + VATWN++S +A   I  ++  I E   +I+  QE 
Sbjct: 56 TTMRVATWNIDS-KAHPDIKEMSNIIHERGIEIMGFQEI 93


>gi|242817518|ref|XP_002486972.1| endonuclease/exonuclease/phosphatase family protein [Talaromyces
           stipitatus ATCC 10500]
 gi|218713437|gb|EED12861.1| endonuclease/exonuclease/phosphatase family protein [Talaromyces
           stipitatus ATCC 10500]
          Length = 334

 Score = 39.4 bits (90), Expect = 0.54,   Method: Composition-based stats.
 Identities = 33/258 (12%), Positives = 65/258 (25%), Gaps = 31/258 (12%)

Query: 32  IICLQET-KTEDKNF----PFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGD 86
            ICLQE    + ++              +     G+         S      +   L   
Sbjct: 85  FICLQEVLHVQLEDILGGLTQAAKAEEQWAYIGVGRDDGEKQGEYSPIIYQPVTWQLHHW 144

Query: 87  DLDVQARFIE----ATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRL 142
           +    +   E    +    +T+ + IG                       R    A++ +
Sbjct: 145 ETVWLSETPEKPSKSWDAASTRIVTIGVFRHRATGKFLLVLNTHLDDQGPRSRYEAARII 204

Query: 143 ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH 202
             +      G Y+              +        +      L +          +   
Sbjct: 205 LGKINGYLDGSYDETISGVVLAGDFNSQETQEAYQTLTAKESILVDSQKITKATEHYGNE 264

Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSP-------------EATSLLHSARIDTKPRGWT 249
             ++ + Y           RID+I+L P                  + ++R D       
Sbjct: 265 ITWTGFGY-----EDEPKSRIDYILLGPVDKSSDEPHHRWNSIGYAVLASRFDDGV---- 315

Query: 250 KPSDHTPVIVSLDIPEPR 267
             SDH  V+V  D+ +P 
Sbjct: 316 WNSDHRAVVVDADLADPS 333


>gi|147853091|emb|CAN81282.1| hypothetical protein VITISV_037391 [Vitis vinifera]
          Length = 1449

 Score = 39.4 bits (90), Expect = 0.54,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 8/46 (17%)

Query: 2   SVVTV--ATWNVNSIRA----RIHNLAAWIKENNPDIICLQETKTE 41
           S++ +   +WNV   RA    +   + A I+    D+  LQETK  
Sbjct: 480 SLMKIRLLSWNVR--RANDSSKRKLIKALIRNQRVDLFRLQETKIH 523


>gi|148272370|ref|YP_001221931.1| putative membrane protein with hydrolase activity [Clavibacter
           michiganensis subsp. michiganensis NCPPB 382]
 gi|147830300|emb|CAN01234.1| putative membrane protein with hydrolase activity [Clavibacter
           michiganensis subsp. michiganensis NCPPB 382]
          Length = 345

 Score = 39.4 bits (90), Expect = 0.54,   Method: Composition-based stats.
 Identities = 47/268 (17%), Positives = 72/268 (26%), Gaps = 45/268 (16%)

Query: 4   VTVATWN----VNSIRARIHNLAAWIKENNPDIICLQETK----TEDKNFPFETLQSLNY 55
           VTV TWN        RA    +A    E+  D+I L ET+     E      +  + +  
Sbjct: 109 VTVLTWNTLGGATGARA----VADLAIESGADVITLPETREETGAEIAVLMRDAGRPMWV 164

Query: 56  HIETCGQ--KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
                     + +   ++S       +    G    +    +E         + +  +  
Sbjct: 165 RTAAFDDVAAARSTTILISAAYGDYRMDESRGTTSVLPTVIMEPVDGNGPVIMAVHPVSP 224

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
                        +     R       +   E  +I AGD+N        Y     E D 
Sbjct: 225 IP-----------EQMDNWRADLAWLGQRCDEGNVIIAGDFNATLDHMSRYGGAPTERDQ 273

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
              L       +    G                             G  IDHIM +P   
Sbjct: 274 VTDLGKCVDAGRASGNGAVGTWPTGLPAL----------------LGTPIDHIMATPGWA 317

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSL 261
             +   R+     G    SDH PVI  L
Sbjct: 318 --VTGFRVVEDRDGA--GSDHRPVIAQL 341


>gi|330833582|ref|YP_004402407.1| DNA nuclease [Streptococcus suis ST3]
 gi|329307805|gb|AEB82221.1| DNA nuclease [Streptococcus suis ST3]
          Length = 1039

 Score = 39.4 bits (90), Expect = 0.54,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 41/93 (44%), Gaps = 18/93 (19%)

Query: 192 TDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL-------LHSARIDTK 244
              + + HD    +S++ Y  ++ S      +D++++S             ++SA ++  
Sbjct: 867 MANLVSRHDASDRFSYF-YNGNNQS------LDNMLVSTNLLDRYAFDMVHVNSAFMEEH 919

Query: 245 PRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQN 277
            R     SDH P++V LD+ + ++  Q   S  
Sbjct: 920 GR----ASDHDPLLVQLDVTKAQEPTQPEPSDK 948


>gi|321453147|gb|EFX64413.1| hypothetical protein DAPPUDRAFT_118205 [Daphnia pulex]
          Length = 367

 Score = 39.4 bits (90), Expect = 0.54,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 2/37 (5%)

Query: 4  VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQET 38
          + V + N+  I    R+  L  +   N  D+ICLQE 
Sbjct: 1  MKVTSINIARISTPERLQLLLNYCVSNEFDVICLQEV 37


>gi|218437404|ref|YP_002375733.1| endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 7424]
 gi|218170132|gb|ACK68865.1| Endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 7424]
          Length = 1073

 Score = 39.4 bits (90), Expect = 0.54,   Method: Composition-based stats.
 Identities = 8/41 (19%), Positives = 19/41 (46%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +DHI++S    +      +    +   + SDH P++   ++
Sbjct: 884 LDHILVSDNLLNSAEFDIVHINSQFADQTSDHDPLLARFNL 924


>gi|169787278|gb|ACA80078.1| putative DNA lyase [Colletotrichum caudatum]
          Length = 233

 Score = 39.4 bits (90), Expect = 0.54,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 22/57 (38%)

Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81
           +    DI+ +QETK + K+   + +    + +     K   G + ++ Y       
Sbjct: 2  FEILEADIVVMQETKIQRKDLQDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATCC 58


>gi|169787224|gb|ACA80051.1| putative DNA lyase [Colletotrichum caudatum]
          Length = 233

 Score = 39.4 bits (90), Expect = 0.54,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 22/57 (38%)

Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81
           +    DI+ +QETK + K+   + +    + +     K   G + ++ Y       
Sbjct: 2  FEILEADIVVMQETKIQRKDLQDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATCC 58


>gi|223933529|ref|ZP_03625511.1| LPXTG-motif cell wall anchor domain protein [Streptococcus suis
           89/1591]
 gi|223897789|gb|EEF64168.1| LPXTG-motif cell wall anchor domain protein [Streptococcus suis
           89/1591]
          Length = 651

 Score = 39.4 bits (90), Expect = 0.54,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 41/93 (44%), Gaps = 18/93 (19%)

Query: 192 TDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL-------LHSARIDTK 244
              + + HD    +S++ Y  ++ S      +D++++S             ++SA ++  
Sbjct: 479 MANLVSRHDASDRFSYF-YNGNNQS------LDNMLVSTNLLDRYAFDMVHVNSAFMEEH 531

Query: 245 PRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQN 277
            R     SDH P++V LD+ + ++  Q   S  
Sbjct: 532 GR----ASDHDPLLVQLDVTKAQEPTQPEPSDK 560


>gi|307591319|ref|YP_003900118.1| endonuclease I [Cyanothece sp. PCC 7822]
 gi|306986173|gb|ADN18052.1| Endonuclease I [Cyanothece sp. PCC 7822]
          Length = 573

 Score = 39.4 bits (90), Expect = 0.54,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 33/92 (35%), Gaps = 13/92 (14%)

Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT----SLLHSARIDTKPRGW 248
           + +         YSF       +  N+ + ID I++S          + +  ++    G 
Sbjct: 258 ENLTEKIPLAERYSFI------FKGNREL-IDQILVSENLASGGQPEIKAVHVNAGKPG- 309

Query: 249 TKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
            + SDH PVI S  I    K      S N  P
Sbjct: 310 -RASDHDPVIASFTIFPSSKVVIPPVSANDAP 340


>gi|255943518|ref|XP_002562527.1| Pc19g00360 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211587261|emb|CAP79452.1| Pc19g00360 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 294

 Score = 39.4 bits (90), Expect = 0.54,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 16/47 (34%), Gaps = 4/47 (8%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKK 269
           ID ++ S      +    I     G    SDH  +    D P P  K
Sbjct: 30  IDLVLASENLADSMTKCAIL----GTDHGSDHDAIETVFDAPWPIPK 72


>gi|149634120|ref|XP_001506672.1| PREDICTED: similar to laminin beta 2-like chain [Ornithorhynchus
            anatinus]
          Length = 1850

 Score = 39.4 bits (90), Expect = 0.54,   Method: Composition-based stats.
 Identities = 14/162 (8%), Positives = 32/162 (19%), Gaps = 7/162 (4%)

Query: 60   CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
            C      G      +           +  +          + +       +     G   
Sbjct: 1061 CYCDRITGHCSCRPHVLGRNCDRCAPNFWNFGGTHGCEPCSCHPTRSLHLSCNTFTGQCH 1120

Query: 120  TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                +  +     +   +    LE           +  P+  +                 
Sbjct: 1121 CRAGFGGRTCSHCQEGYWGDPELE-------CRACDCDPRGSESLQCHRLTGRCSCREGF 1173

Query: 180  RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI 221
              S   +   GF D+       H  ++ WD       K+   
Sbjct: 1174 TGSRCSVCTRGFQDSFPHCPPCHPCFTHWDQQLGLLRKHLAW 1215


>gi|149199822|ref|ZP_01876852.1| hypothetical protein LNTAR_23729 [Lentisphaera araneosa HTCC2155]
 gi|149137110|gb|EDM25533.1| hypothetical protein LNTAR_23729 [Lentisphaera araneosa HTCC2155]
          Length = 271

 Score = 39.4 bits (90), Expect = 0.54,   Method: Composition-based stats.
 Identities = 32/242 (13%), Positives = 68/242 (28%), Gaps = 42/242 (17%)

Query: 25  IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLP 84
           I+ +  D++ LQE               + +H      +     A  S+    E V    
Sbjct: 66  IQASPVDLLALQE-----------AEAEMTWHKNLHQSQFLAEQAGFSQVAQGEHVRGKR 114

Query: 85  GDDLD----VQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQ 140
                            +       L     ++         K+   IS    FL   ++
Sbjct: 115 YSYGTAVLSKLKIVHSESHVFPRSKLTFPKGFVSAEVISHCQKHFRVISLHLDFLHEKTR 174

Query: 141 RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHD 200
           + +++    +  +   +P          +  +             L+ +     ++  + 
Sbjct: 175 QRQIQMLCNYIQNQAPLPLIIMGDFNCQYRKNGV-----------LERLAQELNLQVWNP 223

Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
              + SF            G+R+D I++S E     +S  +          SDH  V   
Sbjct: 224 QEKIVSF---------PKLGLRLDWILISQEM--RFNSYELWDDL-----ASDHLAVRAE 267

Query: 261 LD 262
           L+
Sbjct: 268 LE 269


>gi|303324261|ref|XP_003072118.1| Endonuclease/Exonuclease/phosphatase family protein [Coccidioides
           posadasii C735 delta SOWgp]
 gi|240111828|gb|EER29973.1| Endonuclease/Exonuclease/phosphatase family protein [Coccidioides
           posadasii C735 delta SOWgp]
          Length = 343

 Score = 39.4 bits (90), Expect = 0.55,   Method: Composition-based stats.
 Identities = 37/279 (13%), Positives = 74/279 (26%), Gaps = 44/279 (15%)

Query: 6   VATWNVNS------IRARIHNLAAWIKENNP--DIICLQE-TKTEDKNFPFETLQSLNYH 56
           + TWN+N       IR     +   I++  P  D+I LQE T+T         L ++ + 
Sbjct: 70  LVTWNINGTDLAPDIRTSA--IITHIRDMRPVMDVIFLQEVTRTT-----LSVLLAMPWV 122

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
            E       +  +         I T +                       R+        
Sbjct: 123 REQWYSSEADATSWG----HQSISTMMLLSKSRFHGLKRTPERAALGAVWRVPFPSHFGR 178

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN----- 171
           + +    +    +  +           +    +      I P        II        
Sbjct: 179 DALCCDIFLPICNPSECKKSVPGSHARIRLVNVHLDSLAIQPSYRPRQLSIIASYLRATG 238

Query: 172 ----DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI- 226
                  F   + +    +      D     H     +++      ++  N   R+D + 
Sbjct: 239 RGLVAGDFNPVLPEDDSIINENNLVDMWTELHPNDPGFTWGIDGKQAYPAN---RLDKVA 295

Query: 227 ----------MLSPEATSLLHSARIDTKPRGWTKPSDHT 255
                     ++ P   +  ++A    + R   K SDH 
Sbjct: 296 KLGLKTHEIEVIPPGTCTYAYAAENRPEER-EHKWSDHC 333


>gi|169787300|gb|ACA80089.1| putative DNA lyase [Colletotrichum miscanthi]
          Length = 233

 Score = 39.4 bits (90), Expect = 0.55,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 22/57 (38%)

Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81
           +    DI+ +QETK + K+   + +    + +     K   G + ++ Y       
Sbjct: 2  FEILEADIVVIQETKIQRKDLHDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATCC 58


>gi|147841954|emb|CAN67512.1| hypothetical protein VITISV_026954 [Vitis vinifera]
          Length = 793

 Score = 39.4 bits (90), Expect = 0.55,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 2/36 (5%)

Query: 4   VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQE 37
           + + +WNV           + A IK+   D++CLQE
Sbjct: 136 LRLLSWNVRGANDYEKRKVIKALIKDQKVDLVCLQE 171


>gi|126735526|ref|ZP_01751271.1| Endonuclease/exonuclease/phosphatase [Roseobacter sp. CCS2]
 gi|126714713|gb|EBA11579.1| Endonuclease/exonuclease/phosphatase [Roseobacter sp. CCS2]
          Length = 326

 Score = 39.4 bits (90), Expect = 0.55,   Method: Composition-based stats.
 Identities = 32/252 (12%), Positives = 69/252 (27%), Gaps = 52/252 (20%)

Query: 15  RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS--LNYH-IETCGQKSYNGVAIL 71
             R  +L   I+  +PD++ L ET         E L+S    Y  +++  +  + G+   
Sbjct: 110 NTRYDDLINIIEREDPDVLLLMET----DALWAEALESTLARYATVKSYIEDDHYGMIFA 165

Query: 72  SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWI 131
           ++   +      P DD     + I              +   P     T T+     +  
Sbjct: 166 TRLDVVSTEFIWPIDDDTPAVKAILRAPNGPEFNFIGLHPRPPVPGNDTETRDRQIKNAA 225

Query: 132 KRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191
                     + + +    +  +                       E     +     G 
Sbjct: 226 LMTSSMDRPTICMGDFNDVSWSW-----------------TTKRFKEYGNFREPRIGRGM 268

Query: 192 TDAIRATHDTHHLYSFWDYYADSWSKNKGIR--IDHIMLSPEATSLLHSARIDTKPRGWT 249
             +  A +                     +R  ID + ++        +  + +  R   
Sbjct: 269 ISSFHADYPF-------------------MRLPIDQLFVTE-------NVGLVSFARLEN 302

Query: 250 KPSDHTPVIVSL 261
             SDH P+I ++
Sbjct: 303 FGSDHFPMIATI 314


>gi|114707796|ref|ZP_01440690.1| hypothetical protein FP2506_17604 [Fulvimarina pelagi HTCC2506]
 gi|114536785|gb|EAU39915.1| hypothetical protein FP2506_17604 [Fulvimarina pelagi HTCC2506]
          Length = 244

 Score = 39.4 bits (90), Expect = 0.55,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 5/40 (12%)

Query: 4  VTVATWNVNSI----RAR-IHNLAAWIKENNPDIICLQET 38
          +   T+N++S     R R    + A I +   D++ LQE 
Sbjct: 1  MRFVTYNIHSCLGTDRRRDPDRIGAVISDLRADVVALQEV 40



 Score = 39.4 bits (90), Expect = 0.64,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 18/40 (45%), Gaps = 3/40 (7%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
           +DH     +    + SA +   P    + SDH P+++  D
Sbjct: 202 LDHCFFRGDL--KVRSAYVVRSPL-VRRASDHLPLVIDFD 238


>gi|242068817|ref|XP_002449685.1| hypothetical protein SORBIDRAFT_05g021596 [Sorghum bicolor]
 gi|241935528|gb|EES08673.1| hypothetical protein SORBIDRAFT_05g021596 [Sorghum bicolor]
          Length = 649

 Score = 39.4 bits (90), Expect = 0.56,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 18/51 (35%), Gaps = 10/51 (19%)

Query: 1   MSVVTVATWNVNSI------RARIHNLAAWIKENNPDIICLQETKTEDKNF 45
                V +WNV  +                     P +ICLQE+K +D N 
Sbjct: 501 FRTFNVLSWNVCGLGDLDKCNLVRSVFLDV----KPSVICLQESKLDDINL 547


>gi|169787288|gb|ACA80083.1| putative DNA lyase [Glomerella tucumanensis]
          Length = 233

 Score = 39.4 bits (90), Expect = 0.56,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 22/57 (38%)

Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81
           +    DI+ +QETK + K+   + +    + +     K   G + ++ Y       
Sbjct: 2  FEILEADIVVMQETKIQRKDLHDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATCC 58


>gi|169787228|gb|ACA80053.1| putative DNA lyase [Glomerella tucumanensis]
 gi|169787280|gb|ACA80079.1| putative DNA lyase [Glomerella tucumanensis]
          Length = 233

 Score = 39.4 bits (90), Expect = 0.56,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 22/57 (38%)

Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81
           +    DI+ +QETK + K+   + +    + +     K   G + ++ Y       
Sbjct: 2  FEILEADIVVMQETKIQRKDLHDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATCC 58


>gi|169787216|gb|ACA80047.1| putative DNA lyase [Colletotrichum caudatum]
 gi|169787218|gb|ACA80048.1| putative DNA lyase [Colletotrichum caudatum]
          Length = 233

 Score = 39.4 bits (90), Expect = 0.56,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 22/57 (38%)

Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81
           +    DI+ +QETK + K+   + +    + +     K   G + ++ Y       
Sbjct: 2  FEILEADIVVMQETKIQRKDLHDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATCC 58


>gi|147768164|emb|CAN71649.1| hypothetical protein VITISV_003282 [Vitis vinifera]
          Length = 1021

 Score = 39.4 bits (90), Expect = 0.56,   Method: Composition-based stats.
 Identities = 26/229 (11%), Positives = 55/229 (24%), Gaps = 32/229 (13%)

Query: 33  ICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQA 92
           +C+QETK +                         GV              L         
Sbjct: 312 LCIQETKMQ---------------------VMSEGVVRSLGSGRFLNWRALNAIGSVGGV 350

Query: 93  RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG 152
                   +       G   +                 +        +    EE     G
Sbjct: 351 LICWDKRLLEILEWEEGQFSISCRLRNVEDGVVWVFMGVYGPFSREERECLWEEIGAIGG 410

Query: 153 DYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYA 212
            +         +N I+++++      +  + ++   +     +         +++     
Sbjct: 411 LWEEPWCLGGDFNTILYQSERSRNGRITSAMRRFAQIIDDLGLVDLPLQGGSFTW----- 465

Query: 213 DSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKP-SDHTPVIV 259
                N+   R+D  + +P               R   +P SDH PVI+
Sbjct: 466 SGGLNNQSWARLDRFLATPSWFDQYSRVS----QRRLPRPTSDHFPVIL 510


>gi|281338990|gb|EFB14574.1| hypothetical protein PANDA_021039 [Ailuropoda melanoleuca]
          Length = 114

 Score = 39.4 bits (90), Expect = 0.56,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 12/107 (11%)

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
                 E       L  M  TD +R        Y F+     ++S     RIDHI+    
Sbjct: 14  KQKINKETMTLNNTLDQMDKTDILRTFLPRATEYMFFSSVHGTFS-----RIDHILGHKS 68

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278
             +     +I +      + SDH    + L++   +K  + + +  +
Sbjct: 69  GLNKYKKIKIISS-----RFSDHKA--MKLEVNHRKKFGKTTNTWRL 108


>gi|147844432|emb|CAN82094.1| hypothetical protein VITISV_031210 [Vitis vinifera]
          Length = 1501

 Score = 39.4 bits (90), Expect = 0.57,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 22/62 (35%), Gaps = 11/62 (17%)

Query: 201 THHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKP-SDHTPVI 258
               +++          N+   R+D  + +P               R  ++P SDH PV+
Sbjct: 697 QGGSFTW-----SGGLNNQSWARLDRFLATPSWLDQYSRV----HQRRLSRPTSDHFPVL 747

Query: 259 VS 260
           + 
Sbjct: 748 LE 749


>gi|323497286|ref|ZP_08102305.1| metal-dependent hydrolase [Vibrio sinaloensis DSM 21326]
 gi|323317643|gb|EGA70635.1| metal-dependent hydrolase [Vibrio sinaloensis DSM 21326]
          Length = 232

 Score = 39.4 bits (90), Expect = 0.58,   Method: Composition-based stats.
 Identities = 28/237 (11%), Positives = 59/237 (24%), Gaps = 15/237 (6%)

Query: 31  DIICLQETKTEDKNFPFETLQSLNYHIET--CGQKSYNGVAILSKYQPIEIVTHLPGDDL 88
           D++  QE    +     + +    Y I      Q+ +         Q   +         
Sbjct: 4   DVLAFQEV---NDEAALQKVIGKGYDIVFSDRTQERHTEKRFHDINQFTGVAIKHGISWQ 60

Query: 89  DVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPL 148
           ++    ++       +      +      PI       K      +      R+  ++  
Sbjct: 61  NMPDVLLDQRSNSKLRFATYVVIQPNSERPIHLLSVHLKARCSGAYKNNRDCRILKQQGE 120

Query: 149 IFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFW 208
                 N     +  Y  +   N               Q+     A + T     +    
Sbjct: 121 RLNQWINEKEVANQAYVILGDFNHNLSYPNDWLWNTLTQSNRAQLATQRTRAECKV---- 176

Query: 209 DYYADSWSKNKGI-R--IDHIMLSPEATSLLHSARIDTKPRGWT-KPSDHTPVIVSL 261
              +          R  IDHI++S +         +    +    + SDH P+   L
Sbjct: 177 --RSRKQPNKTHSFRSLIDHIIVSDQIKLSAPKQDVYPSQQVLKHQLSDHCPITAQL 231


>gi|308478180|ref|XP_003101302.1| hypothetical protein CRE_14091 [Caenorhabditis remanei]
 gi|308264007|gb|EFP07960.1| hypothetical protein CRE_14091 [Caenorhabditis remanei]
          Length = 1212

 Score = 39.4 bits (90), Expect = 0.58,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 68/252 (26%), Gaps = 45/252 (17%)

Query: 10  NVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVA 69
           N NSI  ++  L    +  N D+ CL ETK  D +F    L   + +      ++ +G  
Sbjct: 298 NCNSISNKLSKLDLLCEYYNFDVFCLSETKL-DNSFTDSLLSINDNYSILRKDRNRHGGG 356

Query: 70  ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKIS 129
           +            +        A            T+RI   Y P+     ST +D    
Sbjct: 357 VGILIAKHIRFVPVDLPASSQSAEVCAIDIFAGGTTIRIITAYHPNHGHSKSTLFD---- 412

Query: 130 WIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNM 189
                       L   +  +  GD+N+     +       +      ++        Q++
Sbjct: 413 -------TLEYLLIPGKHTVLLGDFNMPCIDWN--LLSAPDKACADFVDFVVKHGLTQSV 463

Query: 190 GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT 249
                    +                       +D  +          +  I +      
Sbjct: 464 KSPTRFNPENI----------------------LDLCL---------SNTGIISDVSVGD 492

Query: 250 KPSDHTPVIVSL 261
             SDH  + V L
Sbjct: 493 LFSDHCLIKVVL 504


>gi|262382995|ref|ZP_06076132.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|262295873|gb|EEY83804.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
          Length = 305

 Score = 39.4 bits (90), Expect = 0.58,   Method: Composition-based stats.
 Identities = 38/299 (12%), Positives = 71/299 (23%), Gaps = 56/299 (18%)

Query: 4   VTVATWNV-----------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52
           + VAT+N+           N    R   +A  I+ +  DI   QE K +           
Sbjct: 23  MVVATYNLRNANAGDSTNGNGWGQRYPYIAQLIQFHGFDIFGTQEGKYQ--QLQDLKNVM 80

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL-RIGNL 111
             Y     G+         S     +    +        +   +         L RI   
Sbjct: 81  PGYDYIGVGRDDGKQAGEHSAIFYRKEKFEVLDHGDFWLSTITDRPNKGWDAVLPRICTW 140

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
                     T     +      +     +   E   +        P            N
Sbjct: 141 GKFRDKQTGFTFLFFNL-----HMDHIGVQARAESAKLILKKLKEFP-EKLPAILTGDFN 194

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK--GIRIDHIMLS 229
                                      +  +  +       +++  ++    RIDH+ L+
Sbjct: 195 VDQHNESYLLLDNSGIMRDSYQIADFRYVPNGTF-------NAFHADRKTDSRIDHLFLT 247

Query: 230 PEATSLLHSARIDTK-PRGWTK------------------------PSDHTPVIVSLDI 263
            E    +    + T   R   K                        PSDH PV++ +++
Sbjct: 248 KEFD--VKKYGVLTDSYRSEAKESTEKEQNANFPKEVSMQKYVARTPSDHFPVMIVVEV 304


>gi|308806584|ref|XP_003080603.1| Endonuclease/exonuclease/phosphatase (ISS) [Ostreococcus tauri]
 gi|116059064|emb|CAL54771.1| Endonuclease/exonuclease/phosphatase (ISS) [Ostreococcus tauri]
          Length = 546

 Score = 39.4 bits (90), Expect = 0.58,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 25/61 (40%), Gaps = 9/61 (14%)

Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
             Y++    + +        +D+I++S      L SA I          SDH P++  +D
Sbjct: 276 DRYTWRSGSSKAK-------LDYILVSRSDFD-LVSASIQHD-LVNASVSDHFPLLAIVD 326

Query: 263 I 263
           +
Sbjct: 327 V 327


>gi|238755079|ref|ZP_04616426.1| hypothetical protein yruck0001_22720 [Yersinia ruckeri ATCC 29473]
 gi|238706639|gb|EEP99009.1| hypothetical protein yruck0001_22720 [Yersinia ruckeri ATCC 29473]
          Length = 266

 Score = 39.4 bits (90), Expect = 0.59,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 22/55 (40%), Gaps = 12/55 (21%)

Query: 209 DYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           D  + ++    G  +D++    E    +  A +       T+ SDH P+ V   +
Sbjct: 224 DNRSRAF----GRPLDYVFY-REL--KVADAEVL-----VTRASDHNPLWVEFKL 266


>gi|189461476|ref|ZP_03010261.1| hypothetical protein BACCOP_02135 [Bacteroides coprocola DSM 17136]
 gi|189431810|gb|EDV00795.1| hypothetical protein BACCOP_02135 [Bacteroides coprocola DSM 17136]
          Length = 514

 Score = 39.4 bits (90), Expect = 0.59,   Method: Composition-based stats.
 Identities = 18/138 (13%), Positives = 38/138 (27%), Gaps = 9/138 (6%)

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYN-IIPQPHDCYNPIIWENDACFT 176
            I +                 +  +E+   +     +  +        +  I EN     
Sbjct: 141 YIAADWLHHFPVAKCALEHGKNVAVEVPSAMNLKECWALVNLSETSRKHCFILENCCYDW 200

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDY-YADSWSKNKGIRIDH-------IML 228
            E+       Q +            H+L +FWDY + +      G R+D+       +  
Sbjct: 201 FEMNTLNMAQQGVLGEVIRAQGAYIHNLEAFWDYYWKNGKEDKLGWRLDYNMRHRGDVYA 260

Query: 229 SPEATSLLHSARIDTKPR 246
           +     +  +  I    R
Sbjct: 261 THGLGPVAQALDIHRGDR 278


>gi|33465891|gb|AAQ19327.1| bZIP-like protein [Oryza sativa Japonica Group]
          Length = 2367

 Score = 39.4 bits (90), Expect = 0.59,   Method: Composition-based stats.
 Identities = 22/175 (12%), Positives = 56/175 (32%), Gaps = 14/175 (8%)

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
            + L    P     +      ++   R  S    + +         I       +    +
Sbjct: 820 YVQLSPEEPQWHVTFVYGEPRVENRHRMWSLLRTIHQSSSLPWAV-IGDFNETMWQFEHF 878

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
                   +++     LQ+    D              +D   + W +N  +R+D ++  
Sbjct: 879 SRTPRGEPQMQDFRDVLQDCELHDLGFKGVPHT-----YDNKREGW-RNVKVRLDRVVAD 932

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTS----QNMKP 280
            +   +  +A++       +  SDH P++++L + +P + +Q           +P
Sbjct: 933 DKWRDIYSTAQVVHLV---SPCSDHCPILLNLVVKDPHQLRQKCLHYEIVWEREP 984


>gi|238880020|gb|EEQ43658.1| conserved hypothetical protein [Candida albicans WO-1]
          Length = 438

 Score = 39.4 bits (90), Expect = 0.60,   Method: Composition-based stats.
 Identities = 39/303 (12%), Positives = 86/303 (28%), Gaps = 40/303 (13%)

Query: 4   VTVATWNVNSIR-------ARIHNLAAWIK-----ENNPDIICLQETKTEDKNFPFETLQ 51
           + + T+N   ++        R+  +A  +      + + DI+ LQE   E+     + + 
Sbjct: 20  IKLLTFNTWGLKFISKHRKERLRAIADALANPKSPDEDYDIVALQEIWCEEDWQYLDLVC 79

Query: 52  SLNY---HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108
              Y    +   G  S  G+A+LSK    E   +    +    A F    +   +  + +
Sbjct: 80  RPRYPYRRVFKAGIVSGPGLAVLSKISIAETFLYRFPINGRPSAFFRGDFYVGKSIAVTM 139

Query: 109 GN--------------LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDY 154
                                     ++    +      F +      +    +I  GD 
Sbjct: 140 FQPHHPDILPIALLNSHMHAPYGSGDASYSTHRACQAWDFAKLVRMLKKAGYAVIQVGDL 199

Query: 155 NIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADS 214
           N  P         +          + +      +   T ++        + +        
Sbjct: 200 NSKPDSLPYKLFTVEGGLTDSWNVLNKDNVVPNDQIATLSLEDQISLAGV-TCNSRLNTW 258

Query: 215 WSKNKGI---RIDHIMLSPEATSLLHSARIDTKPRGWTKP-----SDHTPVIVSLDIPEP 266
                     R+D+ ++     + + SA++         P     SDH    V L I   
Sbjct: 259 RESRPFWEACRLDYALIDASNITPV-SAQV-RFVDKLPPPLSCSYSDHFAYSVDLVIRPK 316

Query: 267 RKK 269
            ++
Sbjct: 317 EER 319


>gi|145351477|ref|XP_001420103.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144580336|gb|ABO98396.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 578

 Score = 39.4 bits (90), Expect = 0.60,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 20/44 (45%), Gaps = 1/44 (2%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTED-KNFPFETLQSLNYHIET 59
           R  N+   I   N DI+CLQE +++  ++F    +    Y    
Sbjct: 248 RRQNILKEIVNYNADILCLQEVQSDHYEDFFQGEMAKYGYASVY 291


>gi|110677885|ref|YP_680892.1| hypothetical protein RD1_0499 [Roseobacter denitrificans OCh 114]
 gi|109454001|gb|ABG30206.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114]
          Length = 253

 Score = 39.4 bits (90), Expect = 0.60,   Method: Composition-based stats.
 Identities = 32/265 (12%), Positives = 72/265 (27%), Gaps = 25/265 (9%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           + V +WNV +       +A  +   NPDI  LQE      +   + +++   H+      
Sbjct: 9   LRVLSWNVFNENPDPARIAEALATLNPDIALLQE--ALPAHI--DEIKASFPHVSVARDY 64

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +  G                        ++     +  +   +   +          +  
Sbjct: 65  ALKGELCHLVIASRFPTRRETTLFHADTSKPAPTRWARHAGWVEFLDSLSVDVVVPGTRP 124

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ--PHDCYNPIIWENDACFTLEVRQ 181
           +          +  + ++ EL E                 + Y            L  R 
Sbjct: 125 FRVVNLHTSAGVSPSVRQAELAETQRHFDHEGPCLVAGDFNSYAVPWLAPLLAIPLHYRP 184

Query: 182 SFQKLQNMGFTDAIRATH---DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
               +      +A           H  +F  +             D +  + +    + +
Sbjct: 185 KDWLIFERRALNAWFRRRGFAPALHGVTFPKFRLQM---------DQVF-TRDIM--VET 232

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263
           A I+   R W   SDH P+++ + +
Sbjct: 233 AAIER--RLW--GSDHRPILLDISV 253


>gi|90579026|ref|ZP_01234836.1| hypothetical protein VAS14_04953 [Vibrio angustum S14]
 gi|90439859|gb|EAS65040.1| hypothetical protein VAS14_04953 [Vibrio angustum S14]
          Length = 379

 Score = 39.4 bits (90), Expect = 0.60,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 26/70 (37%), Gaps = 17/70 (24%)

Query: 211 YADSWSKNKGIRIDHIMLSPEATSLLHSARI-----DTKPR-------GWTKP---SDHT 255
             + W+   G+R+D+++ S      +    +         R       G  KP   SDH 
Sbjct: 312 RKNEWTHLAGLRLDYVLPSKNLD--VIETGVFWPDKHDSLRELILDCKGREKPSAGSDHR 369

Query: 256 PVIVSLDIPE 265
            V   ++I +
Sbjct: 370 MVWADINIAD 379


>gi|72008481|ref|XP_786487.1| PREDICTED: similar to RP1-30M3.3 [Strongylocentrotus purpuratus]
 gi|115968135|ref|XP_001192231.1| PREDICTED: similar to RP1-30M3.3 [Strongylocentrotus purpuratus]
          Length = 238

 Score = 39.4 bits (90), Expect = 0.60,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 18/40 (45%), Gaps = 5/40 (12%)

Query: 4  VTVATWNVNSIR-----ARIHNLAAWIKENNPDIICLQET 38
          + + TWN+  +      AR       ++   PD+I LQE 
Sbjct: 36 LRLVTWNIYGLGNKDTLARTSAACDTLESLFPDVIFLQEV 75


>gi|116200556|ref|XP_001226090.1| hypothetical protein CHGG_10823 [Chaetomium globosum CBS 148.51]
 gi|88175537|gb|EAQ83005.1| hypothetical protein CHGG_10823 [Chaetomium globosum CBS 148.51]
          Length = 484

 Score = 39.4 bits (90), Expect = 0.60,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 22/59 (37%), Gaps = 7/59 (11%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
           IDH   +        +     + RG    SDH P ++ + I  P  +Q      N K +
Sbjct: 138 IDHFWATVGL----QTTYYGLEQRGK---SDHYPQVLEVHISGPPLQQSQPEGWNWKMM 189


>gi|15838039|ref|NP_298727.1| hypothetical protein XF1438 [Xylella fastidiosa 9a5c]
 gi|9106456|gb|AAF84247.1|AE003974_2 conserved hypothetical protein [Xylella fastidiosa 9a5c]
          Length = 245

 Score = 39.4 bits (90), Expect = 0.61,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 18/49 (36%), Gaps = 11/49 (22%)

Query: 221 IR----IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
            R    IDHI++S           I          SDH  V + L IP+
Sbjct: 200 WRPERAIDHILVSEGL-------HICKTEAVPAAFSDHLAVSMDLVIPQ 241


>gi|169787274|gb|ACA80076.1| putative DNA lyase [Colletotrichum jacksonii]
          Length = 233

 Score = 39.4 bits (90), Expect = 0.61,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 24/57 (42%)

Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81
           +    DI+ +QETK + K+   + +    + +     K+  G + ++ Y  I    
Sbjct: 2  FEILEADIVVMQETKIQRKDLSDDMVLVPGWDVAFSLPKNKKGYSGVAIYTRIATCC 58


>gi|169787272|gb|ACA80075.1| putative DNA lyase [Colletotrichum jacksonii]
 gi|169787318|gb|ACA80098.1| putative DNA lyase [Colletotrichum jacksonii]
 gi|169787322|gb|ACA80100.1| putative DNA lyase [Colletotrichum jacksonii]
 gi|169787324|gb|ACA80101.1| putative DNA lyase [Colletotrichum jacksonii]
          Length = 233

 Score = 39.4 bits (90), Expect = 0.61,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 24/57 (42%)

Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81
           +    DI+ +QETK + K+   + +    + +     K+  G + ++ Y  I    
Sbjct: 2  FEILEADIVVMQETKIQRKDLSDDMVLVPGWDVAFSLPKNKKGYSGVAIYTRIATCC 58


>gi|6735373|emb|CAB68194.1| putative protein [Arabidopsis thaliana]
          Length = 597

 Score = 39.4 bits (90), Expect = 0.61,   Method: Composition-based stats.
 Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 2/40 (5%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56
           R  NL   I +   DI+CLQE   ++ +F    L  L+ H
Sbjct: 279 RRQNLLREIVKYRADIVCLQEV--QNDHFEEFFLPELDKH 316


>gi|22331849|ref|NP_191415.2| endonuclease/exonuclease/phosphatase family protein [Arabidopsis
           thaliana]
 gi|75248588|sp|Q8W0Z9|CCR4A_ARATH RecName: Full=Carbon catabolite repressor protein 4 homolog 1;
           Short=CCR4 homolog 1
 gi|18087604|gb|AAL58932.1|AF462845_1 AT3g58560/F14P22_150 [Arabidopsis thaliana]
 gi|22137046|gb|AAM91368.1| At3g58560/F14P22_150 [Arabidopsis thaliana]
          Length = 602

 Score = 39.4 bits (90), Expect = 0.61,   Method: Composition-based stats.
 Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 2/40 (5%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56
           R  NL   I +   DI+CLQE   ++ +F    L  L+ H
Sbjct: 279 RRQNLLREIVKYRADIVCLQEV--QNDHFEEFFLPELDKH 316


>gi|68061719|ref|XP_672860.1| hypothetical protein [Plasmodium berghei strain ANKA]
 gi|56490274|emb|CAI05680.1| hypothetical protein PB405489.00.0 [Plasmodium berghei]
          Length = 298

 Score = 39.4 bits (90), Expect = 0.61,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 25/69 (36%), Gaps = 10/69 (14%)

Query: 186 LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKP 245
           ++ M   D  +  +     Y+F+     ++SK     IDHI+      +   +  I    
Sbjct: 61  MKEMDLPDIYKTFYPETKGYTFFSARHSTFSK-----IDHIIGHKAGLNRYKNIEIVPCI 115

Query: 246 RGWTKPSDH 254
                 SDH
Sbjct: 116 L-----SDH 119


>gi|295133317|ref|YP_003583993.1| endonuclease/Exonuclease/phosphatase family protein [Zunongwangia
           profunda SM-A87]
 gi|294981332|gb|ADF51797.1| endonuclease/Exonuclease/phosphatase family protein [Zunongwangia
           profunda SM-A87]
          Length = 349

 Score = 39.4 bits (90), Expect = 0.62,   Method: Composition-based stats.
 Identities = 31/248 (12%), Positives = 72/248 (29%), Gaps = 25/248 (10%)

Query: 19  HNLAAWIKENNPDIICLQET-KTE--DKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75
             +   IKE +PDI+ ++E  K E  +K +P++ ++  +               +  +  
Sbjct: 122 EKINDIIKEADPDILTIEEYYKNEYLEKKYPYKFIKYRSDKSSFGQAIFSKFPLLAKRSL 181

Query: 76  PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135
              +      ++  +    I    TI    +   +L +           + + S      
Sbjct: 182 DFHVDNFTGDNNNAIFTDIIIKKDTIRLYNIHFQSLQVTEDVQEVDNFKNKQESKKVIKN 241

Query: 136 RFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAI 195
             +    +  +        +    P            +    +VR    +   +      
Sbjct: 242 ISSGFVRQQNQSERVKRSIDSSEYPVIISGDFNNTAFSYTYNQVRNDRFQDAFVKKGAGF 301

Query: 196 RATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHT 255
            +            Y  + +     +RID  +L            I++  R     SDH 
Sbjct: 302 SS-----------TYNLNYFP----LRIDFHLLDTVF-------EINSYERIKVPYSDHY 339

Query: 256 PVIVSLDI 263
           P++ +  I
Sbjct: 340 PILTTFSI 347


>gi|170782964|ref|YP_001711298.1| hypothetical protein CMS_2654 [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169157534|emb|CAQ02728.1| conserved hypothetical protein [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 281

 Score = 39.4 bits (90), Expect = 0.62,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 23/49 (46%), Gaps = 5/49 (10%)

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDH 254
           ++ +Y A   +     RID ++++P+    +    I+T       PSDH
Sbjct: 229 TWSNYKAPKRTT---RRIDWMLVTPDVE--VERVGINTTRIDGRAPSDH 272


>gi|224011357|ref|XP_002295453.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|209583484|gb|ACI64170.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 712

 Score = 39.4 bits (90), Expect = 0.62,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 25/80 (31%), Gaps = 1/80 (1%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFE-TLQSLNYHIETCGQKSYNGVAILSKYQ 75
           R+  +   +  +N DIICLQE + +         L  L Y       +       L    
Sbjct: 199 RLERMIQILSHSNSDIICLQECELQSFQDDLAPALSKLGYDGIAQEDERDERPTSLKYVT 258

Query: 76  PIEIVTHLPGDDLDVQARFI 95
                 +        +++F 
Sbjct: 259 KHRDPRNHIAATFWKRSKFD 278


>gi|149202233|ref|ZP_01879206.1| endonuclease/exonuclease/phosphatase family protein [Roseovarius
           sp. TM1035]
 gi|149144331|gb|EDM32362.1| endonuclease/exonuclease/phosphatase family protein [Roseovarius
           sp. TM1035]
          Length = 341

 Score = 39.4 bits (90), Expect = 0.62,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 22/53 (41%), Gaps = 12/53 (22%)

Query: 223 IDHIMLSPEATSL---------LHS--ARIDTKPRG-WTKPSDHTPVIVSLDI 263
           +D+I++SP+  +                  + + R      SDH PV + L++
Sbjct: 289 LDYILISPDLMARRPVWRIWHPFDDPVCWDNKELRDALLMASDHFPVSLDLEL 341


>gi|150396093|ref|YP_001326560.1| endonuclease/exonuclease/phosphatase [Sinorhizobium medicae WSM419]
 gi|150027608|gb|ABR59725.1| Endonuclease/exonuclease/phosphatase [Sinorhizobium medicae WSM419]
          Length = 287

 Score = 39.4 bits (90), Expect = 0.62,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 3/56 (5%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278
           +D ++ +P    L+ S  +   P      SDH PV  S+D+   +K   D     +
Sbjct: 227 LDRVLGNPH--HLVTSVEVHDSPLARV-ASDHLPVKASIDLKAAQKDDADGDEARL 279


>gi|222615657|gb|EEE51789.1| hypothetical protein OsJ_33245 [Oryza sativa Japonica Group]
          Length = 825

 Score = 39.4 bits (90), Expect = 0.63,   Method: Composition-based stats.
 Identities = 21/168 (12%), Positives = 43/168 (25%), Gaps = 15/168 (8%)

Query: 101 INTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP 160
              + + +    +           DD   W    +    +  + +         N     
Sbjct: 19  FWKKEINLRLRTVSRLFMDVDVMEDDGFWWRFTGVYGEPRSDKKDLTWKALRTLNATKGE 78

Query: 161 HDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT-----HDTHHLYSF---WDYYA 212
                    E    +  E   +  +     F   +          T   +++   W    
Sbjct: 79  LWLCVGDFNEVLFSWEKERGHAKAQSCMDRFRQTLDCCSLSNLGFTGDPFTWRNNWCVRD 138

Query: 213 DSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
               +    R+D  +   +      S R+     G  + SDH PVIV+
Sbjct: 139 GYIRE----RLDRAVADSDWCCRFPSFRVRK---GDPRHSDHHPVIVT 179


>gi|156376821|ref|XP_001630557.1| predicted protein [Nematostella vectensis]
 gi|156217580|gb|EDO38494.1| predicted protein [Nematostella vectensis]
          Length = 222

 Score = 39.4 bits (90), Expect = 0.63,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           +A  N+NSI+ +   L   IK+    ++ + ETK  D ++P        Y + 
Sbjct: 89  IAHLNINSIQNKFEELCKIIKDLQIHVMFISETKI-DSSYPDSQFSMAGYSLY 140


>gi|156376358|ref|XP_001630328.1| predicted protein [Nematostella vectensis]
 gi|156217346|gb|EDO38265.1| predicted protein [Nematostella vectensis]
          Length = 494

 Score = 39.4 bits (90), Expect = 0.63,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           +A  N+NSI+ +   L   IK+    ++ + ETK  D ++P        Y + 
Sbjct: 237 IAHLNINSIQNKFEELCKIIKDLQIHVMFISETKI-DSSYPDSQFSMAGYSLY 288


>gi|156349335|ref|XP_001622016.1| hypothetical protein NEMVEDRAFT_v1g221280 [Nematostella vectensis]
 gi|156208405|gb|EDO29916.1| predicted protein [Nematostella vectensis]
          Length = 1047

 Score = 39.4 bits (90), Expect = 0.63,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           +A  N+NSI+ +   L   IK+    ++ + ETK  D ++P        Y + 
Sbjct: 321 IAHLNINSIQNKFEELCKIIKDLQIHVMFISETKI-DSSYPDSQFSMAGYSLY 372



 Score = 39.4 bits (90), Expect = 0.63,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           +A  N+NSI+ +   L   IK+    ++ + ETK  D ++P        Y + 
Sbjct: 475 IAHLNINSIQNKFEELCKIIKDLQIHVMFISETKI-DSSYPDSQFSMAGYSLY 526



 Score = 39.4 bits (90), Expect = 0.63,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           +A  N+NSI+ +   L   IK+    ++ + ETK  D ++P        Y + 
Sbjct: 782 IAHLNINSIQNKFEELCKIIKDLQIHVMFISETKI-DSSYPDSQFSMAGYSLY 833


>gi|297846518|ref|XP_002891140.1| endonuclease/exonuclease/phosphatase family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297336982|gb|EFH67399.1| endonuclease/exonuclease/phosphatase family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 419

 Score = 39.4 bits (90), Expect = 0.63,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 24/61 (39%), Gaps = 1/61 (1%)

Query: 15  RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKY 74
           +AR H + + +K    D  CLQE   E  +F    ++SL Y      +         + +
Sbjct: 123 KARSHAILSVLKNLKADFFCLQEVD-EYDSFYRNNMESLGYSGIYIQRTGQRKRDGCAIF 181

Query: 75  Q 75
            
Sbjct: 182 Y 182



 Score = 38.2 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 19/52 (36%), Gaps = 13/52 (25%)

Query: 223 IDHIMLSPEATSLLHSARID-------TKPRGWT----KPSDHTPVIVSLDI 263
           +D+I +SP     +    I            G+      PSDH P+    +I
Sbjct: 367 LDYIFISPS--DFIKPVSILQLPEPDSPDIVGFLPNHHHPSDHLPIGAEFEI 416


>gi|294506961|ref|YP_003571019.1| Endonuclease/exonuclease/phosphatase family [Salinibacter ruber M8]
 gi|294343289|emb|CBH24067.1| Endonuclease/exonuclease/phosphatase family [Salinibacter ruber M8]
          Length = 361

 Score = 39.4 bits (90), Expect = 0.63,   Method: Composition-based stats.
 Identities = 42/314 (13%), Positives = 83/314 (26%), Gaps = 78/314 (24%)

Query: 3   VVTVATWNVNSIRARIHNLAA-----WIKE-----------------------NNPDIIC 34
            V VATWN       + +        +I                          + D++ 
Sbjct: 66  TVRVATWN-------LEHFVDGHDNPYIDAGTENTPAPDLKNRKRRVARALRRLDADLLV 118

Query: 35  LQETKTEDKN----FPFETLQSLNYHIE-TCGQKSYNGVAILSKYQPIEIVTHLPG---- 85
           LQE   E +     F  + L    Y    +    ++    +L    P+ +V +       
Sbjct: 119 LQE--AESEAFLQSFVEDRLGDTGYRFATSVESPTWYMNVVLLSRYPLGVVRNYADVVTP 176

Query: 86  -------------DDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIK 132
                          L     +         +   +   +L  G       +        
Sbjct: 177 IVGQEADNGEPAAQSLTNHRLWTADVRVAPNRVWTLIGAHLKAGRSAADRGWRIGQIRFL 236

Query: 133 RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192
                  +       ++ AGD N +P   +    +   +      +  Q  +   ++ FT
Sbjct: 237 HAELSRLRDDRPAAKMLVAGDLNSLPDSPELRLLLNNPD--RPAPDSVQPGRVPGDIRFT 294

Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR-----G 247
           D +       H            + N   ++D+++ +P  +  L    +    R      
Sbjct: 295 DPLSDRPTPTHP-----------ADNPVRQLDYLLPNPALSDRLVDGSV-RVARPLPADS 342

Query: 248 WTKPSDHTPVIVSL 261
               SDH PV  S 
Sbjct: 343 MAATSDHLPVAASF 356


>gi|170739969|ref|YP_001768624.1| endonuclease/exonuclease/phosphatase [Methylobacterium sp. 4-46]
 gi|168194243|gb|ACA16190.1| Endonuclease/exonuclease/phosphatase [Methylobacterium sp. 4-46]
          Length = 1795

 Score = 39.4 bits (90), Expect = 0.63,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 21/42 (50%)

Query: 223  IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
            +DH++++    + +    +      + + SDH P++  L IP
Sbjct: 1285 LDHVLVTDALAAGVQFEPVHINADFFDQTSDHDPLLARLAIP 1326


>gi|300776178|ref|ZP_07086037.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910]
 gi|300505311|gb|EFK36450.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910]
          Length = 311

 Score = 39.4 bits (90), Expect = 0.64,   Method: Composition-based stats.
 Identities = 37/269 (13%), Positives = 67/269 (24%), Gaps = 33/269 (12%)

Query: 20  NLAAWIKENN---PDIICLQET---KTEDKNFPFETLQ-SLNYHIETCGQKSYNGVAILS 72
           ++   +KE+N   P +I L E    K  +     E               +    VA+L 
Sbjct: 47  HVFQLMKEDNGVLPFMIGLSEVSGRKVLEDLVEMEPFNSEYGIVHYNSMDERKVDVAMLY 106

Query: 73  KYQPIEIVTHLPGDDLD-----------VQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
               +E++                         + +      + + +   +LP       
Sbjct: 107 DKNKVEVIDSETITFFFEIVNKNTENYDTTRDVLFSKIKYKGEIINVFIAHLPSKREKDI 166

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD--CYNPIIWENDACFTLEV 179
            K        +   R        +E +I  GD+N  P   +                   
Sbjct: 167 NKPKRAFILNEIRQRIMKIVDADKEHVILCGDFNENPDDENLVQILYDNEHEKVLVNPFQ 226

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRID-HIMLSPEATSLLHS 238
           +    +  +     +           S  D    ++        D HI  S +  S   +
Sbjct: 227 QLFSTRNYSTFHYKSGLLYDQIIMSRSLLDNKTLAFQ-------DAHIFNSEKIRSRTRN 279

Query: 239 AR-----IDTKPRGWTKPSDHTPVIVSLD 262
                       R     SDH PV V   
Sbjct: 280 FEGRPFRTYAGTRYLGGYSDHFPVFVKFK 308


>gi|326920839|ref|XP_003206674.1| PREDICTED: protein angel homolog 1-like [Meleagris gallopavo]
          Length = 659

 Score = 39.4 bits (90), Expect = 0.64,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 24/64 (37%), Gaps = 7/64 (10%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTED----KNFPFETLQSLNYHIETCGQKSYNGVAILS 72
           R+ N+   I+  +PD++CLQE   ++    +     T   + +      +          
Sbjct: 264 RLPNILQEIQHWDPDVLCLQEV--QENHYREQLEP-TFMKMGFACFYKRRTGRKTDGCAV 320

Query: 73  KYQP 76
            Y+ 
Sbjct: 321 CYKQ 324


>gi|169787258|gb|ACA80068.1| putative DNA lyase [Colletotrichum paspali]
 gi|169787304|gb|ACA80091.1| putative DNA lyase [Colletotrichum paspali]
          Length = 233

 Score = 39.4 bits (90), Expect = 0.64,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 22/57 (38%)

Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81
           +    DI+ +QETK + K+   + +    + +     K   G + ++ Y       
Sbjct: 2  FEILEADIVIMQETKIQRKDLHDDMVLIPGWDVFFSLPKHKKGYSGVAIYTRNATCC 58


>gi|160890835|ref|ZP_02071838.1| hypothetical protein BACUNI_03280 [Bacteroides uniformis ATCC 8492]
 gi|317479733|ref|ZP_07938855.1| endonuclease/Exonuclease/phosphatase [Bacteroides sp. 4_1_36]
 gi|156859834|gb|EDO53265.1| hypothetical protein BACUNI_03280 [Bacteroides uniformis ATCC 8492]
 gi|316904103|gb|EFV25935.1| endonuclease/Exonuclease/phosphatase [Bacteroides sp. 4_1_36]
          Length = 287

 Score = 39.4 bits (90), Expect = 0.64,   Method: Composition-based stats.
 Identities = 7/40 (17%), Positives = 18/40 (45%), Gaps = 2/40 (5%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
           ID++ +       +    +  +       SDH P++V+++
Sbjct: 250 IDYVFVRNGL--KVLRYGVLAETENNAFLSDHAPILVTVE 287


>gi|83774376|dbj|BAE64500.1| unnamed protein product [Aspergillus oryzae]
          Length = 1292

 Score = 39.4 bits (90), Expect = 0.64,   Method: Composition-based stats.
 Identities = 31/280 (11%), Positives = 67/280 (23%), Gaps = 32/280 (11%)

Query: 1   MSV--VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           M+   + +   N+   RA +  L    +  N DI+ +QE            L + + H+ 
Sbjct: 1   MTTPNLRLVQLNIWKSRAGMEALINDSQTQNLDILLIQE----------PPLTAYSTHVN 50

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
                        S  Q                +         N   +    ++      
Sbjct: 51  H-----SAWHLYQSTCQEDTPKKRSLLYVNRRISTASHRQIKCNHPDVTAVKMWTMERQM 105

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
           +  + Y    +  +     + Q +  E             +P        +        +
Sbjct: 106 LIFSIYVPTTNHSQPMEEVSIQAMLEEIETCIQQAIETTDKPTTIIMAGDFNRHHPMWSK 165

Query: 179 VRQSFQKLQNMGFTDAIRATHD-----THHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
            R     +++          H           ++W       +      ID  +      
Sbjct: 166 NRIYHVAIEHAEELVTFFHKHGLQPCLPRGTPTYWSMSYPGSNST----IDLTVTDTP-- 219

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDS 273
             L    +     G    SDH  V     +   R  +++ 
Sbjct: 220 ESLIKCHLYHDHYG----SDHRAVYSEWSLDPSRNAEREP 255


>gi|313201147|ref|YP_004039805.1| endonuclease/exonuclease/phosphatase [Methylovorus sp. MP688]
 gi|312440463|gb|ADQ84569.1| Endonuclease/exonuclease/phosphatase [Methylovorus sp. MP688]
          Length = 241

 Score = 39.4 bits (90), Expect = 0.65,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 25/53 (47%), Gaps = 5/53 (9%)

Query: 221 IRIDHIMLSPEATSLLHSARID-TKPRGWTKPSDHTPVIVSLDIPEPRKKQQD 272
           +R+D +         + + RI     R   + SDH P+++ L+ PE   +++ 
Sbjct: 193 LRLDRVWY-EAEGIKITAHRIHGNDIR---RLSDHLPIVIELEWPESWPEKRT 241


>gi|115730339|ref|XP_791769.2| PREDICTED: similar to reverse transcriptase-like protein, partial
           [Strongylocentrotus purpuratus]
          Length = 956

 Score = 39.4 bits (90), Expect = 0.65,   Method: Composition-based stats.
 Identities = 15/36 (41%), Positives = 23/36 (63%)

Query: 9   WNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKN 44
           WN NS+R + + L  +I ENN DI+ L ET  + ++
Sbjct: 76  WNCNSLRNKTYLLTDYILENNVDIMFLTETWLKSED 111


>gi|294668724|ref|ZP_06733817.1| endonuclease/exonuclease/phosphatase family protein [Neisseria
           elongata subsp. glycolytica ATCC 29315]
 gi|291309241|gb|EFE50484.1| endonuclease/exonuclease/phosphatase family protein [Neisseria
           elongata subsp. glycolytica ATCC 29315]
          Length = 250

 Score = 39.4 bits (90), Expect = 0.66,   Method: Composition-based stats.
 Identities = 32/263 (12%), Positives = 73/263 (27%), Gaps = 27/263 (10%)

Query: 4   VTVATWNVN-SI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57
           +T+AT+N++  +     + +I ++A  ++   PDI+ LQE   + +N   E         
Sbjct: 5   ITIATYNIHKGMSPLNRKVQISDMAQALESLKPDILFLQEV--QGQNLLRELKLP----- 57

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
                +  + +             +            +        Q + I    L    
Sbjct: 58  -DFPARPQDNIIADHLAYYTSYGKNAVFPQKHHGNAILSRLPMQMRQNVNISVNRLEKRG 116

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
            +      D        L      LE +    +   +  +        P+I   D     
Sbjct: 117 VLHCEILPDGWEMPIVCLCAHLNLLERDRVKQYVAIFEYVTTYIPPEAPLILAGDFNDWR 176

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
                            +    +    +        +      + +D I  +      + 
Sbjct: 177 HKSTLNIGSTLGLTEVFLDRHGELPKTF-------PARMPV--LSLDRIY-TRNLD--IL 224

Query: 238 SARIDTKPRGWTKPSDHTPVIVS 260
           +A + ++   W   SDH P+  +
Sbjct: 225 NATLHSEE-PWQYLSDHLPLSAT 246


>gi|147768602|emb|CAN78335.1| hypothetical protein VITISV_004143 [Vitis vinifera]
          Length = 336

 Score = 39.4 bits (90), Expect = 0.66,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 48/148 (32%), Gaps = 17/148 (11%)

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
               + +  +   F       ++ E   +++    I    ++ +  +   N   F  E  
Sbjct: 148 CRFKNCEDGFCWSFSGVYGPTMKAERKELWSELGAIRGIWNEPWCIVGDFNMIRFPSERS 207

Query: 181 QSFQKLQNMGFTDAIRATHD------THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
           +  +  Q M     +    D          +++        +     RID  ++S E  S
Sbjct: 208 RGGRLSQEMRRFSEVVEELDLRDLPLQGGSFTWC----GGLNNRSKSRIDRFLISEEWES 263

Query: 235 LLHSAR--IDTKPRGWTKPSDHTPVIVS 260
               A   I T+P      SDH PV++ 
Sbjct: 264 HFQGAVQTILTRP-----VSDHAPVLLD 286


>gi|325922786|ref|ZP_08184516.1| metal-dependent hydrolase [Xanthomonas gardneri ATCC 19865]
 gi|325546728|gb|EGD17852.1| metal-dependent hydrolase [Xanthomonas gardneri ATCC 19865]
          Length = 305

 Score = 39.0 bits (89), Expect = 0.67,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 7/63 (11%)

Query: 4   VTVATWNVNSIR----ARIHNLAAWIKENNPDIICLQET---KTEDKNFPFETLQSLNYH 56
           +T+ T N++  R    AR   +A  +K+  PD+I LQE    +   +N      + L Y 
Sbjct: 53  MTLVTLNLHHDREDWPARRAYIAKQLKQLAPDVIALQEVIERRGSVENQAAWLARKLGYE 112

Query: 57  IET 59
              
Sbjct: 113 YTF 115


>gi|221105136|ref|XP_002165882.1| PREDICTED: similar to pol-like protein, partial [Hydra
          magnipapillata]
          Length = 606

 Score = 39.0 bits (89), Expect = 0.67,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 20/49 (40%), Gaps = 2/49 (4%)

Query: 5  TVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQ 51
           + + N+  +  +     +    +E N DII LQET     N     L+
Sbjct: 5  KIFSVNICGLNDKNKQNVVITKFQEMNYDIIMLQETHLSKNNADDFLLK 53


>gi|221091677|ref|XP_002169998.1| PREDICTED: similar to pol-like protein [Hydra magnipapillata]
          Length = 308

 Score = 39.0 bits (89), Expect = 0.67,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 8/43 (18%)

Query: 7  ATWNVNSI-----RARIHNLAAWIKENNPDIICLQETKTEDKN 44
           T NVN +     R   HN+  ++K    DI C+QET   ++ 
Sbjct: 2  LTLNVNGLYDDIKR---HNIMMYLKNTCCDIACIQETHFSNEK 41


>gi|297612697|ref|NP_001066197.2| Os12g0156200 [Oryza sativa Japonica Group]
 gi|108862221|gb|ABA96496.2| retrotransposon protein, putative, unclassified, expressed [Oryza
           sativa Japonica Group]
 gi|255670064|dbj|BAF29216.2| Os12g0156200 [Oryza sativa Japonica Group]
          Length = 1764

 Score = 39.0 bits (89), Expect = 0.67,   Method: Composition-based stats.
 Identities = 22/175 (12%), Positives = 56/175 (32%), Gaps = 14/175 (8%)

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
            + L    P     +      ++   R  S    + +         I       +    +
Sbjct: 217 YVQLSPEEPQWHVTFVYGEPRVENRHRMWSLLRTIHQSSSLPWAV-IGDFNETMWQFEHF 275

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
                   +++     LQ+    D              +D   + W +N  +R+D ++  
Sbjct: 276 SRTPRGEPQMQDFRDVLQDCELHDLGFKGVPHT-----YDNKREGW-RNVKVRLDRVVAD 329

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTS----QNMKP 280
            +   +  +A++       +  SDH P++++L + +P + +Q           +P
Sbjct: 330 DKWRDIYSTAQVVHLV---SPCSDHCPILLNLVVKDPHQLRQKCLHYEIVWEREP 381


>gi|87308507|ref|ZP_01090647.1| deoxyribonuclease gamma (precursor) [Blastopirellula marina DSM
           3645]
 gi|87288599|gb|EAQ80493.1| deoxyribonuclease gamma (precursor) [Blastopirellula marina DSM
           3645]
          Length = 392

 Score = 39.0 bits (89), Expect = 0.67,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 34/85 (40%), Gaps = 10/85 (11%)

Query: 3   VVTVATWNV----NSIRARIHNLAAWIKE--NNPDIICLQETKTEDKNFPFET---LQSL 53
            + +A++N+     S +A   ++ A + +     D++ +QE ++ D++   E    + + 
Sbjct: 125 TIRIASFNIQVFGRS-KADKPHVMARLAQIVRQYDVMAIQEIRSLDQSILPEFIDQINAA 183

Query: 54  NYHIETCGQKSYNGVAILSKYQPIE 78
             H +              +Y  I 
Sbjct: 184 GRHYDYVIGPRLGRSDSKEQYAYIY 208


>gi|189025772|ref|YP_001933544.1| hypothetical protein TPASS_0544 [Treponema pallidum subsp. pallidum
           SS14]
 gi|189018347|gb|ACD70965.1| hypothetical protein TPASS_0544 [Treponema pallidum subsp. pallidum
           SS14]
          Length = 624

 Score = 39.0 bits (89), Expect = 0.68,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 15/52 (28%)

Query: 4   VTVATWNV---------NSIRARI--HNLAAWIKENNPDIICLQETKTEDKN 44
           + +A++NV         +S RAR+   +    +K   PD+ICL E   +D +
Sbjct: 301 LNIASYNVENFSAGNKADSARARVFAKHFVNDLKA--PDVICLVEI--QDDD 348


>gi|147863118|emb|CAN78774.1| hypothetical protein VITISV_001219 [Vitis vinifera]
          Length = 1012

 Score = 39.0 bits (89), Expect = 0.68,   Method: Composition-based stats.
 Identities = 11/28 (39%), Positives = 17/28 (60%)

Query: 15  RARIHNLAAWIKENNPDIICLQETKTED 42
           R +   + A IK    D++CLQETK ++
Sbjct: 207 REKRKVIKALIKGQKVDLVCLQETKMQE 234


>gi|125842765|ref|XP_698034.2| PREDICTED: protein angel homolog 1-like [Danio rerio]
          Length = 667

 Score = 39.0 bits (89), Expect = 0.68,   Method: Composition-based stats.
 Identities = 15/109 (13%), Positives = 31/109 (28%), Gaps = 5/109 (4%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73
           R+  +   ++   PDI+CLQE   ++ +F  +    L ++ Y      +           
Sbjct: 293 RLQAVLKELQIWQPDIVCLQEV--QEDHFQEQMHPVLINMGYTCIYKRRTGSKTDGCAVL 350

Query: 74  YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
           Y+               ++             L +     PH       
Sbjct: 351 YRGERFTQLSVSLLEFRRSECELLDRDNVGIVLLLQPTAGPHHQFTPVC 399


>gi|15639533|ref|NP_218983.1| hypothetical protein TP0544 [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|3322837|gb|AAC65531.1| predicted coding region TP0544 [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|291059921|gb|ADD72656.1| endonuclease/exonuclease/phosphatase family [Treponema pallidum
           subsp. pallidum str. Chicago]
          Length = 622

 Score = 39.0 bits (89), Expect = 0.68,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 15/52 (28%)

Query: 4   VTVATWNV---------NSIRARI--HNLAAWIKENNPDIICLQETKTEDKN 44
           + +A++NV         +S RAR+   +    +K   PD+ICL E   +D +
Sbjct: 301 LNIASYNVENFSAGNKADSARARVFAKHFVNDLKA--PDVICLVEI--QDDD 348


>gi|261334720|emb|CBH17714.1| pantothenate kinase subunit, putative [Trypanosoma brucei gambiense
           DAL972]
          Length = 1467

 Score = 39.0 bits (89), Expect = 0.69,   Method: Composition-based stats.
 Identities = 41/326 (12%), Positives = 75/326 (23%), Gaps = 56/326 (17%)

Query: 4   VTVATWNVNSI--------RARIHNLAAWIKENNPDIICLQET----------------- 38
           + V ++N N +        R RI +    + +   D+I LQE                  
Sbjct: 35  LRVLSYNFNILPRGCGGFQRERISSFLETVDQY--DVIMLQEVYAASVLPYFLQNRMCFQ 92

Query: 39  KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT 98
           K           Q      +                  I     +             A 
Sbjct: 93  KMLVDELVLRGFQHYAISKQPSYTTMLRNNVFSDNGLIIASRFPIGQRGSYTFRSHERAV 152

Query: 99  FTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP 158
            ++    L              S  + +     +      S+ ++       +   N+  
Sbjct: 153 QSVRRGCLFAEVKVPLTSGGEESIIFFNVHLRQEDSDDVTSEHVKETRQFAASVIRNMCS 212

Query: 159 QPHDCYNPI--------------IWENDACFTLEVR----QSFQKLQNMGFTDAIRATHD 200
            P D                             E      Q+          DA      
Sbjct: 213 NPEDVAQIPFVLAGDFDVNGINLHNVGQPTKKYEDLLGELQALGSGVREAVFDAQHRHPP 272

Query: 201 THHLYSFWDYYAD-SWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP----SDHT 255
           T     F+   +    +     R D+  +S      + +  I        +P    SDH 
Sbjct: 273 TRPTELFFPTQSKLVRNSFSPQRQDYFFVSHTVA--VKNPDIHKFVSDSQQPYTYLSDHF 330

Query: 256 PVIVSLDIPEPRKKQQDSTSQNMKPI 281
            V   L IP+  K++     +   P+
Sbjct: 331 GVSAVLAIPQTSKQRH----KRWMPL 352


>gi|222632149|gb|EEE64281.1| hypothetical protein OsJ_19117 [Oryza sativa Japonica Group]
          Length = 911

 Score = 39.0 bits (89), Expect = 0.69,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 81/252 (32%), Gaps = 36/252 (14%)

Query: 12  NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAIL 71
           NS  AR   L   IK  + DI+ LQETK   +NF    L S  +        ++      
Sbjct: 457 NS--ARRGLLKEMIKLRDIDIVGLQETK--RENFSNRELNS--FQGSKTFSWAWKASRGA 510

Query: 72  SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWI 131
           S    + + T       +    +                      + +   K++ K   I
Sbjct: 511 SGGILLGVNTDKVELIRNHVGAYFL--------------------SCVIRHKFNQKTWEI 550

Query: 132 KRFLRFASQRLELEEPLIFAGDYNIIPQPH---DCYNPIIWENDACFTLEVRQSFQKLQN 188
                  +  L+       +      P P      +NP  +  +   +    ++     +
Sbjct: 551 VVVYGPVTDSLKQSFLSELSWHLQDSPHPFIIGGDFNPYRFAKEKSNSNLDFRAMDLFNS 610

Query: 189 MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGW 248
                 +   H +   ++F     D  ++     +D +++S    ++   + + +  R  
Sbjct: 611 FILDMDLSELHRSGARFTF-TNKQDCPTQEV---LDRVLVSQLWEAIYPISTLLSITR-- 664

Query: 249 TKPSDHTPVIVS 260
              SDH+P+I+ 
Sbjct: 665 -IGSDHSPLILD 675


>gi|328789948|ref|XP_392265.4| PREDICTED: phosphatidylinositol 4,5-bisphosphate 5-phosphatase
           A-like isoform 1 [Apis mellifera]
          Length = 430

 Score = 39.0 bits (89), Expect = 0.69,   Method: Composition-based stats.
 Identities = 47/325 (14%), Positives = 85/325 (26%), Gaps = 57/325 (17%)

Query: 4   VTV--ATWNVN------SIRARIHNLAAW--IKENN--PD--IICLQETKTEDKNFPFET 49
           + +   TWNV       S+      L     I  +    D   I LQE K + +N   + 
Sbjct: 8   LRIYFVTWNVATKYPEQSLN----KLLDLNNINNSKTLADLYFIGLQEVKAQPQNMVMDI 63

Query: 50  LQSLNY------------HIETCGQKSYNGVAILSKYQPIEIV---------THLPGDDL 88
                +            +++   Q+    V  +   +                  G   
Sbjct: 64  FFEDPWTKSFREVLKKYDYVKIRTQRLQGLVLNIFCLRKHITHLRSIETQYTRTGCGGMW 123

Query: 89  DVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKIS-WIKRFLRFASQRLELEEP 147
             +                +     PH + +     D         F    + R+   + 
Sbjct: 124 GNKGAVSIRLNIYGINMCVVNTHLTPHDHLLADRIVDYNTILTNHSFSNPDTSRILFHDY 183

Query: 148 LIFAGDYNII-PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY- 205
           + + GD N            I           +    Q    M   DA    +++   + 
Sbjct: 184 VFWIGDLNFRLHGEDLTATEIDILVKKNQLTTLLAKDQLKMVMEKGDAFAELNESAITFP 243

Query: 206 -SFWDYYADSWSKNKGIR---IDHIM--LSPEATSLLHSARIDTKPRGWTKP--SDHTPV 257
            ++  Y   S   +   R    D I+  ++      +    I    +  +    SDH PV
Sbjct: 244 PTY-KYEFASQEFDLKRRPSWTDRILYRVNANIYDDIKLNVIQHNYKSHSNYIQSDHKPV 302

Query: 258 IVSLDI---PEPRK---KQQDSTSQ 276
               DI   P       + Q  TS 
Sbjct: 303 TGEFDIIIRPSIEDYGVEFQPVTSW 327


>gi|71755785|ref|XP_828807.1| pantothenate kinase subunit [Trypanosoma brucei TREU927]
 gi|70834193|gb|EAN79695.1| pantothenate kinase subunit, putative [Trypanosoma brucei]
          Length = 1467

 Score = 39.0 bits (89), Expect = 0.69,   Method: Composition-based stats.
 Identities = 41/326 (12%), Positives = 75/326 (23%), Gaps = 56/326 (17%)

Query: 4   VTVATWNVNSI--------RARIHNLAAWIKENNPDIICLQET----------------- 38
           + V ++N N +        R RI +    + +   D+I LQE                  
Sbjct: 35  LRVLSYNFNILPRGCGGFQRERISSFLETVDQY--DVIMLQEVYAASVLPYFLQNRMCFQ 92

Query: 39  KTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEAT 98
           K           Q      +                  I     +             A 
Sbjct: 93  KMLVDELVLRGFQHYAISKQPSYTTMLRNNVFSDNGLIIASRFPIGQRGSYTFRSHERAV 152

Query: 99  FTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP 158
            ++    L              S  + +     +      S+ ++       +   N+  
Sbjct: 153 QSVRRGCLFAEVKVPLTSGGEESIIFFNVHLRQEDSDDVTSEHVKETRQFAASVIRNMCS 212

Query: 159 QPHDCYNPI--------------IWENDACFTLEVR----QSFQKLQNMGFTDAIRATHD 200
            P D                             E      Q+          DA      
Sbjct: 213 NPEDVAQIPFVLAGDFDVNGINLHNVGQPTKKYEDLLGELQALGSGVREAVFDAQHRHPP 272

Query: 201 THHLYSFWDYYAD-SWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP----SDHT 255
           T     F+   +    +     R D+  +S      + +  I        +P    SDH 
Sbjct: 273 TRPTELFFPTQSKLVRNSFSPQRQDYFFVSHTVA--VKNPDIHKFVSDSQQPYTYLSDHF 330

Query: 256 PVIVSLDIPEPRKKQQDSTSQNMKPI 281
            V   L IP+  K++     +   P+
Sbjct: 331 GVSAVLAIPQTSKQRH----KRWMPL 352


>gi|303236615|ref|ZP_07323196.1| conserved domain protein [Prevotella disiens FB035-09AN]
 gi|302483119|gb|EFL46133.1| conserved domain protein [Prevotella disiens FB035-09AN]
          Length = 193

 Score = 39.0 bits (89), Expect = 0.69,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 23/54 (42%), Gaps = 3/54 (5%)

Query: 21  LAAWIKENNPDIICLQETKTEDK---NFPFETLQSLNYHIETCGQKSYNGVAIL 71
           +  +I+++N DI+CLQET   +    N     +    Y+         N   ++
Sbjct: 124 IVKYIQQSNADIVCLQETNVSEAGGRNVYEALVSKYPYYHILHAHSPGNQHMMV 177


>gi|324999709|ref|ZP_08120821.1| hypothetical protein PseP1_13115 [Pseudonocardia sp. P1]
          Length = 196

 Score = 39.0 bits (89), Expect = 0.70,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 22/56 (39%), Gaps = 7/56 (12%)

Query: 214 SWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKK 269
           SW +  GIRIDH+++          +            SDH  V+V + +P     
Sbjct: 146 SWPRWAGIRIDHVLVP-------RRSSTHRYAVRELPGSDHRAVLVRVALPGQAPD 194


>gi|217927085|gb|ACK57212.1| CG12034-like protein [Drosophila affinis]
          Length = 321

 Score = 39.0 bits (89), Expect = 0.70,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 62/205 (30%), Gaps = 31/205 (15%)

Query: 69  AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYD-DK 127
            +   +        +   D             +  Q + + N +L       + +Y   +
Sbjct: 27  TLFHAWSVNGYFHRIQHADWFGGKGVGLCRILVGDQMVHLYNAHLHAEYDNDNDEYKTHR 86

Query: 128 ISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQ 187
           +       +F           I AGD N  PQ       +                  + 
Sbjct: 87  VIQAFDTAQFIEATRGNSVLQILAGDLNAQPQDISYKVLLYTSK--------------ML 132

Query: 188 NMGFTDAIRATHDTHHLYSFWDYYADSWSKN-KGIRIDHIMLSPEATSLLHSARI----- 241
           +   +D  R     H+ Y+     A + SKN +GIRIDHI +       + +A I     
Sbjct: 133 DSCASDTFRTNECDHNSYT----SAKALSKNPRGIRIDHIFVRGG--DNI-NAEIVEYTL 185

Query: 242 ---DTKPRGWTKPSDHTPVIVSLDI 263
              D  P      SDH  V+  L +
Sbjct: 186 PLPDRVPGQKFSFSDHEAVLAKLKL 210


>gi|242007264|ref|XP_002424462.1| CCR4-NOT transcription complex subunit, putative [Pediculus humanus
           corporis]
 gi|212507862|gb|EEB11724.1| CCR4-NOT transcription complex subunit, putative [Pediculus humanus
           corporis]
          Length = 656

 Score = 39.0 bits (89), Expect = 0.70,   Method: Composition-based stats.
 Identities = 23/207 (11%), Positives = 45/207 (21%), Gaps = 5/207 (2%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL---NYHIETCGQKSYNGVAILSK 73
           R   +   I+    DII LQE   E   F    L  L    Y      +     ++   +
Sbjct: 69  RKKGILEEIRHYAADIISLQEV--ETDQFYNFFLPELKRDGYDGIFSPKSRAKTMSENDR 126

Query: 74  YQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKR 133
                           +    +     +        +  L    P  +      +   + 
Sbjct: 127 KFVDGCAIFYRTAKFSLTKNHLVEFNQLAMANSEGSDHMLNRVMPKDNIGLAALLKTKEA 186

Query: 134 FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTD 193
                 +          AG         +      +   +        S    Q+    +
Sbjct: 187 AWDNGEKSYRYRILTKMAGYQTKEEYWANQSQYNNYNYPSPDPNVGFHSELNFQDTSQYE 246

Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKG 220
            +       + Y+   Y      K  G
Sbjct: 247 NVPNDSWQANYYTGEGYGVQGEFKTTG 273


>gi|168061234|ref|XP_001782595.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162665915|gb|EDQ52584.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 614

 Score = 39.0 bits (89), Expect = 0.70,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTED-KNFPFETLQSLNY 55
           R  NL   I     DI+CLQE +++  ++F    L+   Y
Sbjct: 291 RRQNLLREIVAYRADILCLQEVQSDHYEDFYAPELEKHGY 330


>gi|83414021|emb|CAI30435.1| unspecific 9/13 divinyl ether synthase [Allium sativum]
          Length = 472

 Score = 39.0 bits (89), Expect = 0.70,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 15/60 (25%)

Query: 6   VATWNVN---SIRARIHNLAAWIKENNPDIICLQE---------TKTEDKNFPFETLQSL 53
           + TW +N    IR  +  L  WI  + PD   LQE          ++E+    F  ++ +
Sbjct: 270 IFTWAINAYLGIRTCLMRLFKWIVASGPD---LQEKLAREVRSVVRSEEGKITFAGIEKM 326


>gi|310799683|gb|EFQ34576.1| endonuclease/Exonuclease/phosphatase [Glomerella graminicola
           M1.001]
          Length = 307

 Score = 39.0 bits (89), Expect = 0.70,   Method: Composition-based stats.
 Identities = 35/289 (12%), Positives = 67/289 (23%), Gaps = 45/289 (15%)

Query: 3   VVTVATWNVNSIR--------------ARIHNLAAWIKENNP----DIICLQETKTEDKN 44
            + + T+N   IR               R   L A +          ++C+QE     + 
Sbjct: 24  TLRLMTYN---IRWATPVAGPNEAYWSTRRPRLTAQLNYETAGRPESLLCMQEV---VEQ 77

Query: 45  FPFETLQSLNYHIETCGQKSYNGV-------AILSKYQPIEIVTHLPGDDLDVQARFIEA 97
              +  Q L       G    +G                  +                  
Sbjct: 78  QLLDIAQDLGPAWAHVGVGRDDGAAAGEFSPIFYRPDTWDLVENRTYWLSETPDVPGSRG 137

Query: 98  TFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII 157
                 +   + +                            ++    E  +  A  +   
Sbjct: 138 WDAALPRIATVASFRHAATGLPLVYM-----CTHFDHEGQTARERSAELLVRLAKGWESG 192

Query: 158 PQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTD---AIRATHDTHHLYSFWDYYADS 214
             P D   P+    D     +       +      D    +   H T H  ++  +    
Sbjct: 193 SGPEDTAVPVFLGGDLNVEPDNAAYKTLVAEGNLRDASDVVPEAHRTGHSKTYTAFTDVD 252

Query: 215 WSKNKGIRIDHIMLSPEATSLLH--SARIDTKPRGWTKP-SDHTPVIVS 260
           W     + IDH+ +   A   +   S  +           SDH PV++ 
Sbjct: 253 WDD---MLIDHLFVRDPAARGIKFLSHAVLPNRFDDRLFISDHRPVVLD 298


>gi|317047407|ref|YP_004115055.1| endonuclease/exonuclease/phosphatase [Pantoea sp. At-9b]
 gi|316949024|gb|ADU68499.1| Endonuclease/exonuclease/phosphatase [Pantoea sp. At-9b]
          Length = 253

 Score = 39.0 bits (89), Expect = 0.70,   Method: Composition-based stats.
 Identities = 29/265 (10%), Positives = 63/265 (23%), Gaps = 43/265 (16%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH-IETCGQKS 64
             ++N    R  +  L    +  + DI+ LQE               +  H I +   ++
Sbjct: 21  FTSFN---RRFILPELRDAARATSADIVFLQEV--------------MGTHAIHSLHIEN 63

Query: 65  YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124
           +   +            +  G +                  +   N  +           
Sbjct: 64  WPETSHYEFIADTMWHDYAYGRNAVYPEGHHGNAILSRFPIVEYENRDISVAGGENRGML 123

Query: 125 DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ 184
             KIS   +        + L              +                   +  +  
Sbjct: 124 HCKISLPGQPQPLHVICVHLG--------LREPHRRAQLRMMCEMIASLPPDAPLVVAGD 175

Query: 185 KLQNMGFTDAIRATH-DTHHLYSFWDYY-ADSWS-KNKGIRIDHIML-----SPEATSLL 236
                   +     H     ++S      A ++  +   +R+D I +     S      +
Sbjct: 176 FNDWQVRANPYLKRHAGLEEVFSLKSGRPARTFPARFPLLRLDRIYVRNAAISQPWALPV 235

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSL 261
                      W+  SDH P+ V +
Sbjct: 236 K---------PWSHLSDHAPLAVEI 251


>gi|226952709|ref|ZP_03823173.1| endonuclease/exonuclease/phosphatase [Acinetobacter sp. ATCC 27244]
 gi|226836550|gb|EEH68933.1| endonuclease/exonuclease/phosphatase [Acinetobacter sp. ATCC 27244]
          Length = 821

 Score = 39.0 bits (89), Expect = 0.70,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 24/78 (30%), Gaps = 24/78 (30%)

Query: 223 IDHIMLSPEATSLLHSAR---I---------DTKPRGWT------------KPSDHTPVI 258
           +DH +      S +  A    I           +                 + SDH PVI
Sbjct: 717 LDHAIADSNLYSKVKKAFAWHINADEPTVLDYNEEYKNDEQKALFFAEDPYRSSDHDPVI 776

Query: 259 VSLDIPEPRKKQQDSTSQ 276
           V +D+ +P  K     S 
Sbjct: 777 VDIDLQDPENKPSTQKSS 794


>gi|147866531|emb|CAN81579.1| hypothetical protein VITISV_023185 [Vitis vinifera]
          Length = 1232

 Score = 39.0 bits (89), Expect = 0.70,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 22/61 (36%), Gaps = 9/61 (14%)

Query: 201 THHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
               +++          N+   R+D  ++SP            T+ R     SDH P+++
Sbjct: 59  QGGEFTW-----SGGLNNQAWARLDRFLVSPSWLDQFSGV---TQGRLSRPTSDHFPIVL 110

Query: 260 S 260
            
Sbjct: 111 E 111


>gi|147780543|emb|CAN69124.1| hypothetical protein VITISV_026287 [Vitis vinifera]
          Length = 1048

 Score = 39.0 bits (89), Expect = 0.70,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 21/41 (51%), Gaps = 2/41 (4%)

Query: 4  VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTED 42
          + +  WNV  +    +   +   ++   PD++CL ETK ++
Sbjct: 3  IKILRWNVCGLNDSEKRKLIKGVVRNQKPDLVCLLETKVKE 43


>gi|255721849|ref|XP_002545859.1| hypothetical protein CTRG_00640 [Candida tropicalis MYA-3404]
 gi|240136348|gb|EER35901.1| hypothetical protein CTRG_00640 [Candida tropicalis MYA-3404]
          Length = 436

 Score = 39.0 bits (89), Expect = 0.71,   Method: Composition-based stats.
 Identities = 42/316 (13%), Positives = 92/316 (29%), Gaps = 46/316 (14%)

Query: 4   VTVATWNVNSIR-------ARIHNLAAWI-----KENNPDIICLQETKTEDKNFPFETLQ 51
           + + T+N   ++        R+  +A  +     ++++ DI+ LQE   E+     + + 
Sbjct: 19  IKLLTFNTWGLKYISKFRKQRLRAIADSLANPASEDDDYDIVALQEVWCEEDWQYLDLVC 78

Query: 52  SLNY---HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108
            + Y    I   G  S  G+A+LSK    E   +    +    A F    +   +  + +
Sbjct: 79  RVRYPYRRIFRSGIVSGPGLAVLSKIPVTETFLYRFPINGRPSAFFRGDFYVGKSIAVTM 138

Query: 109 GN--------------LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDY 154
                                     ++    +      F +      +    +I  GD 
Sbjct: 139 FQPQHADILPIALLNSHMHAPYGKGDASYSTHRACQAWDFAKLVRMLKKAGYAVIQVGDL 198

Query: 155 NIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH------DTHHLYSFW 208
           N  P         I    +     + +            ++              L ++ 
Sbjct: 199 NSTPDSLPYKLFTIEGGLSDSWNILNKDRVIPNEEIAKLSLEDQILLAGVTCNSRLNTWR 258

Query: 209 DYYADSWSKNKGIRIDHIMLSPE----ATSLLHSARIDT-KPRGWTKPSDHTPVIVSLDI 263
                 W      R+D+ ++         + +    +D   P      SDH    V L +
Sbjct: 259 STRPL-WEA---CRLDYALIDAANITPIDAKVK--FVDKLNPPFRCSYSDHFAYSVDLVV 312

Query: 264 PEPRKKQQDSTSQNMK 279
                ++  S+  N +
Sbjct: 313 NSINNRKSYSSGANDE 328


>gi|169787230|gb|ACA80054.1| putative DNA lyase [Colletotrichum axonopodi]
          Length = 233

 Score = 39.0 bits (89), Expect = 0.71,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 22/57 (38%)

Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81
           +    DI+ +QETK + K+   + +    + +     K   G + ++ Y       
Sbjct: 2  FEILEADIVVMQETKIQRKDLRDDMVLVPGWDVAFSLPKHKKGYSGVAIYTRNATCC 58


>gi|169787198|gb|ACA80038.1| putative DNA lyase [Colletotrichum hanaui]
 gi|169787210|gb|ACA80044.1| putative DNA lyase [Colletotrichum hanaui]
 gi|169787260|gb|ACA80069.1| putative DNA lyase [Colletotrichum hanaui]
 gi|169787306|gb|ACA80092.1| putative DNA lyase [Colletotrichum hanaui]
          Length = 233

 Score = 39.0 bits (89), Expect = 0.71,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 22/57 (38%)

Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81
           +    DI+ +QETK + K+   + +    + +     K   G + ++ Y       
Sbjct: 2  FEILEADIVVMQETKIQRKDLRDDMVLVPGWDVAFSLPKHKKGYSGVAIYTRNATCC 58


>gi|124359184|gb|ABN05702.1| reverse transcriptase - beet retrotransposon, putative [Medicago
           truncatula]
          Length = 384

 Score = 39.0 bits (89), Expect = 0.71,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 8/57 (14%)

Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
             +++  Y+++  S     RIDH+++S E       + +   PR     SDH P+++
Sbjct: 149 RKFTW--YHSNGRSM---SRIDHVLVSDEWKRAWGDSALWVLPRDV---SDHCPLVL 197


>gi|82793510|ref|XP_728069.1| endonuclease/exonuclease/phosphatase [Plasmodium yoelii yoelii str.
           17XNL]
 gi|23484232|gb|EAA19634.1| Endonuclease/Exonuclease/phosphatase family, putative [Plasmodium
           yoelii yoelii]
          Length = 827

 Score = 39.0 bits (89), Expect = 0.72,   Method: Composition-based stats.
 Identities = 26/225 (11%), Positives = 47/225 (20%), Gaps = 16/225 (7%)

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           Y          + +    K      +                  F    Q +R+  +Y  
Sbjct: 603 YDTFIKISDDLDEIINEIKTVYQIGIFMHNNSQNIFIIANTHLYFHSLAQHIRVIQVYCM 662

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII------ 168
                            K      +                      +            
Sbjct: 663 LHILEKIKNKYKDKYKNKEIYVILNGDFNTNFESEVFSFLQGNDVMENSKLWENGKLFKK 722

Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFW---DYYADSWSKNKGIRIDH 225
             +D      +        +               LYS +   D    +W+ N    +D+
Sbjct: 723 EYDDLNKYPTLFNIDNNSNDQKINGPYLNRKKFLPLYSAYKKVDIPYTNWNNNFIDVLDY 782

Query: 226 IMLSPEATSLLHSARIDTKPRGWTK-------PSDHTPVIVSLDI 263
           I LSPE         +D       K       PSDH  +   +++
Sbjct: 783 IFLSPELKVKRVLKGVDKDIFDQYKGIVSPFNPSDHLSIAAEIEL 827


>gi|144897769|emb|CAM74633.1| Metal-dependent hydrolase [Magnetospirillum gryphiswaldense MSR-1]
          Length = 382

 Score = 39.0 bits (89), Expect = 0.72,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 20/47 (42%), Gaps = 10/47 (21%)

Query: 5   TVATWNVNSIRARIHNLAAW----------IKENNPDIICLQETKTE 41
            +AT+N+ S+  R+     +          ++    DI+CLQE    
Sbjct: 58  RLATFNLESLDDRLSGADDFADRMAVLRPQLQRLRADILCLQEVNAH 104



 Score = 39.0 bits (89), Expect = 0.85,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 12/56 (21%)

Query: 218 NKGIR--IDHIMLSPEATSLLHSARIDTKPRG---------WTKP-SDHTPVIVSL 261
           + G R  +DHI++S      L +  I  +  G         WT P S H P++   
Sbjct: 324 HHGQRVMLDHILVSRPLLGCLAACEIHNETLGDELVGPATVWTAPDSFHAPMVAEF 379


>gi|261819592|ref|YP_003257698.1| endonuclease/exonuclease/phosphatase [Pectobacterium wasabiae
           WPP163]
 gi|261603605|gb|ACX86091.1| Endonuclease/exonuclease/phosphatase [Pectobacterium wasabiae
           WPP163]
          Length = 381

 Score = 39.0 bits (89), Expect = 0.73,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 28/90 (31%), Gaps = 31/90 (34%)

Query: 200 DTHHLYSFWDYYADSWSKNKGIRI---DHIMLSPEATSLLHSARIDT------------- 243
                Y++  Y+A      KG R+   D+I LS      +    ++              
Sbjct: 296 PEKERYTY--YFAGGK---KGARLNQLDYIFLSAPLHQAMVGWGVERRGIYNIDKIAAKE 350

Query: 244 ---------KPRGWTKP-SDHTPVIVSLDI 263
                    +   W    SDH  + V +DI
Sbjct: 351 GAEPVTPLPEVTSWDTAASDHAALWVEVDI 380


>gi|220911600|ref|YP_002486909.1| 5'-nucleotidase domain protein [Arthrobacter chlorophenolicus A6]
 gi|219858478|gb|ACL38820.1| 5'-Nucleotidase domain protein [Arthrobacter chlorophenolicus A6]
          Length = 1512

 Score = 39.0 bits (89), Expect = 0.73,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 24/66 (36%), Gaps = 21/66 (31%)

Query: 223 IDHIMLSPEATSLLHSARI---------------------DTKPRGWTKPSDHTPVIVSL 261
           +DHI+ SP A  ++  A I                     +       + SDH PV+V L
Sbjct: 783 LDHILASPAANGVVTGADIWNINSVESVALEYSRYNNNVTNYYAPDQFRASDHDPVVVGL 842

Query: 262 DIPEPR 267
           D+    
Sbjct: 843 DLKSAP 848


>gi|194383744|dbj|BAG59230.1| unnamed protein product [Homo sapiens]
          Length = 231

 Score = 39.0 bits (89), Expect = 0.73,   Method: Composition-based stats.
 Identities = 39/260 (15%), Positives = 67/260 (25%), Gaps = 48/260 (18%)

Query: 19  HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIE 78
             L +++   +PD+I LQE        P        Y+     + S   +    +     
Sbjct: 3   RALNSYLALYSPDVIFLQEV------IPP-------YYSYLKKRSSNYEIITGHEEGYFT 49

Query: 79  IVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFA 138
            +              I    T   + L   ++ +        T + +            
Sbjct: 50  AIMLKKSRVKLKSQEIIPFPSTKMMRNLLCVHVNVSGNELCLMTSHLESTRGHAAERMNQ 109

Query: 139 SQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT 198
            + +  +             Q       +I+  D             L N          
Sbjct: 110 LKMVLKKM------------QEAPESATVIFAGDTNLRDREVTRCGGLPNNIVDVWEFLG 157

Query: 199 HDTHHLYSFWDYYADSWSKNKG------IRIDHIMLSPEATSLLHSARIDT---KPRGWT 249
              H  Y+ WD   +S   N G      +R D I       +      I        G  
Sbjct: 158 KPKHCQYT-WDTQMNS---NLGITAACKLRFDRIF----FRAAAEEGHIIPRSLDLLGLE 209

Query: 250 K------PSDHTPVIVSLDI 263
           K      PSDH  ++ +LDI
Sbjct: 210 KLDCGRFPSDHWGLLCNLDI 229


>gi|325962168|ref|YP_004240074.1| extracellular nuclease [Arthrobacter phenanthrenivorans Sphe3]
 gi|323468255|gb|ADX71940.1| putative extracellular nuclease [Arthrobacter phenanthrenivorans
           Sphe3]
          Length = 1467

 Score = 39.0 bits (89), Expect = 0.73,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 24/62 (38%), Gaps = 21/62 (33%)

Query: 223 IDHIMLSPEATSLLHSARI---------------------DTKPRGWTKPSDHTPVIVSL 261
           +DHI+ SP A + +  A I                     +       + SDH PVIV L
Sbjct: 738 LDHILASPAADAAVTGADIWNINSVESVALEYSRYNSNITNYYAPDQYRASDHDPVIVGL 797

Query: 262 DI 263
           D+
Sbjct: 798 DL 799


>gi|294776759|ref|ZP_06742223.1| oxidoreductase, NAD-binding domain protein [Bacteroides vulgatus
           PC510]
 gi|294449414|gb|EFG17950.1| oxidoreductase, NAD-binding domain protein [Bacteroides vulgatus
           PC510]
          Length = 502

 Score = 39.0 bits (89), Expect = 0.74,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 32/104 (30%), Gaps = 9/104 (8%)

Query: 151 AGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWD- 209
             D  I     +  + +I EN      E+       Q +            H+L  FWD 
Sbjct: 159 CWDL-INLSEKNRKHCMILENCCYDWFEMNTLNMAQQGVFGEVIRAQGAYIHNLSPFWDH 217

Query: 210 YYADSWSKNKGIRIDH-------IMLSPEATSLLHSARIDTKPR 246
           Y+ +      G R+D+       +  +     +  +  I    R
Sbjct: 218 YWKNGKEDKLGWRLDYNMKHRGDVYATHGLGPVAQALDIHRGDR 261


>gi|325179666|emb|CCA14064.1| carbon catabolite repressor protein putative [Albugo laibachii
           Nc14]
          Length = 607

 Score = 39.0 bits (89), Expect = 0.75,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 21/55 (38%), Gaps = 6/55 (10%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKN-FPFETLQSLNYHIET 59
           V +WN      R   L   +   N DI+CLQE + +    F +  +    Y    
Sbjct: 281 VLSWN-----FRKELLKNELHSYNADILCLQEVQGDHYKTFFYPMMSEWGYDGWY 330


>gi|284121624|ref|ZP_06386820.1| Endonuclease/exonuclease/phosphatase [Candidatus Poribacteria sp.
           WGA-A3]
 gi|283829405|gb|EFC33793.1| Endonuclease/exonuclease/phosphatase [Candidatus Poribacteria sp.
           WGA-A3]
          Length = 378

 Score = 39.0 bits (89), Expect = 0.75,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 30/66 (45%), Gaps = 14/66 (21%)

Query: 211 YADSWSKNKGIRIDHIMLSPEATS-LLHSARI--------DTKPRGWTKP-----SDHTP 256
               + + +G  +DH++++ + T     SAR+          + +G   P     SDH P
Sbjct: 308 RCSHYFRGRGEWLDHVLVAKDMTEMRTRSARVTGYCAVAGCRRIKGEYPPAYRRLSDHCP 367

Query: 257 VIVSLD 262
           VI+ +D
Sbjct: 368 VIIEID 373


>gi|169787350|gb|ACA80114.1| putative DNA lyase [Colletotrichum cereale]
          Length = 233

 Score = 39.0 bits (89), Expect = 0.75,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 22/57 (38%)

Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81
           +    DI+ +QETK + K+   + +    + +     K   G + ++ Y       
Sbjct: 2  FEILGADIVVMQETKIQRKDLHDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATCC 58


>gi|169787220|gb|ACA80049.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787222|gb|ACA80050.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787366|gb|ACA80122.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787368|gb|ACA80123.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787370|gb|ACA80124.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787452|gb|ACA80165.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787454|gb|ACA80166.1| putative DNA lyase [Colletotrichum cereale]
          Length = 233

 Score = 39.0 bits (89), Expect = 0.75,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 22/57 (38%)

Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81
           +    DI+ +QETK + K+   + +    + +     K   G + ++ Y       
Sbjct: 2  FEILGADIVVMQETKIQRKDLHDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATCC 58


>gi|254505117|ref|ZP_05117268.1| endonuclease/exonuclease/phosphatase family [Labrenzia alexandrii
          DFL-11]
 gi|222441188|gb|EEE47867.1| endonuclease/exonuclease/phosphatase family [Labrenzia alexandrii
          DFL-11]
          Length = 324

 Score = 39.0 bits (89), Expect = 0.75,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 10/48 (20%)

Query: 4  VTVATWNVNS----------IRARIHNLAAWIKENNPDIICLQETKTE 41
          + +AT+N+ S          +  RI  L   + E   DI+CLQE   +
Sbjct: 1  MKLATFNLESFGTDRIDEDLLARRIDALRPKLLELEADILCLQEVNAQ 48


>gi|156358597|ref|XP_001624603.1| predicted protein [Nematostella vectensis]
 gi|156211394|gb|EDO32503.1| predicted protein [Nematostella vectensis]
          Length = 159

 Score = 39.0 bits (89), Expect = 0.75,   Method: Composition-based stats.
 Identities = 21/139 (15%), Positives = 42/139 (30%), Gaps = 9/139 (6%)

Query: 125 DDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ 184
           +         L+         + LI  GD N            + +              
Sbjct: 27  EHLKDEFYTRLQEVLDSRNQHDMLIITGDMNAKVGDQKWDYKRVMQKHGLGVRNDNGELC 86

Query: 185 KLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK 244
            L  +  T  +      H   ++     D  +KN+   IDH++++    + +   R+   
Sbjct: 87  DLNELVITGRLFPHRTIHKA-TWIS--PDGKTKNQ---IDHVLVNKRFRNSVKDTRVF-- 138

Query: 245 PRGWTKPSDHTPVIVSLDI 263
            R     SDH  V  ++ +
Sbjct: 139 -RSADVGSDHYLVCATVKL 156


>gi|53749387|gb|AAU90246.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 1275

 Score = 39.0 bits (89), Expect = 0.75,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 81/252 (32%), Gaps = 36/252 (14%)

Query: 12  NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAIL 71
           NS  AR   L   IK  + DI+ LQETK   +NF    L S  +        ++      
Sbjct: 442 NS--ARRGLLKEMIKLRDIDIVGLQETK--RENFSNRELNS--FQGSKTFSWAWKASRGA 495

Query: 72  SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWI 131
           S    + + T       +    +                      + +   K++ K   I
Sbjct: 496 SGGILLGVNTDKVELIRNHVGAYFL--------------------SCVIRHKFNQKTWEI 535

Query: 132 KRFLRFASQRLELEEPLIFAGDYNIIPQPH---DCYNPIIWENDACFTLEVRQSFQKLQN 188
                  +  L+       +      P P      +NP  +  +   +    ++     +
Sbjct: 536 VVVYGPVTDSLKQSFLSELSWHLQDSPHPFIIGGDFNPYRFAKEKSNSNLDFRAMDLFNS 595

Query: 189 MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGW 248
                 +   H +   ++F     D  ++     +D +++S    ++   + + +  R  
Sbjct: 596 FILDMDLSELHRSGARFTF-TNKQDCPTQEV---LDRVLVSQLWEAIYPISTLLSITR-- 649

Query: 249 TKPSDHTPVIVS 260
              SDH+P+I+ 
Sbjct: 650 -IGSDHSPLILD 660


>gi|325181322|emb|CCA15737.1| PREDICTED: similar to pollike protein putative [Albugo laibachii
           Nc14]
          Length = 848

 Score = 39.0 bits (89), Expect = 0.77,   Method: Composition-based stats.
 Identities = 41/235 (17%), Positives = 68/235 (28%), Gaps = 36/235 (15%)

Query: 10  NVNSIRARIHNLAAWIKENNPDIICLQETKTED------------KNFPFETL-QSLNYH 56
           N N ++   H     I      I C+QET+  D              FP ++     N  
Sbjct: 297 NTNGVKQDGHLFIQNIVSKYA-ICCVQETRFRDNRHLETFRFHLASTFPSKSFVSDTNSL 355

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                +   NGV  + +       T      L V  R++    TI    + I N+Y P  
Sbjct: 356 HSHPFRARVNGVMTIIRTDFPGSDTAEALRTLSVTNRYLVVRLTILGAPVYIHNVYAPVD 415

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
                  ++   +                   I  GD N    P    +       +   
Sbjct: 416 PTERKPFFEQVSTGSFEQHAT----------HIVCGDLNTTLCPRLDRSS----GASRHE 461

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
                  + L N+G   A    H    +++      +        R+D+I+LS  
Sbjct: 462 PSRLSCLEWLSNLGVLYAWHLHHPDERVFTGPQPRKN--------RLDYILLSES 508


>gi|298376437|ref|ZP_06986392.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
          sp. 3_1_19]
 gi|298266315|gb|EFI07973.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
          sp. 3_1_19]
          Length = 628

 Score = 39.0 bits (89), Expect = 0.79,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 22/43 (51%), Gaps = 7/43 (16%)

Query: 2  SVVTVATWNV-NSIR-----ARIHNLAAWIKENNPDIICLQET 38
          + + + ++N+ N  R       +  +A  I++  PD++ +QE 
Sbjct: 40 NTLRIMSYNIRNG-RGMDEVTDLGRIAEAIRKVAPDVVAVQEV 81


>gi|265751343|ref|ZP_06087406.1| glycosyl hydrolase family 109 protein 5 [Bacteroides sp. 3_1_33FAA]
 gi|263238239|gb|EEZ23689.1| glycosyl hydrolase family 109 protein 5 [Bacteroides sp. 3_1_33FAA]
          Length = 520

 Score = 39.0 bits (89), Expect = 0.79,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 32/104 (30%), Gaps = 9/104 (8%)

Query: 151 AGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWD- 209
             D  I     +  + +I EN      E+       Q +            H+L  FWD 
Sbjct: 177 CWDL-INLSEKNRKHCMILENCCYDWFEMNTLNMAQQGVFGEIIRAQGAYIHNLSPFWDH 235

Query: 210 YYADSWSKNKGIRIDH-------IMLSPEATSLLHSARIDTKPR 246
           Y+ +      G R+D+       +  +     +  +  I    R
Sbjct: 236 YWKNGKEDKLGWRLDYNMKHRGDVYATHGLGPVAQALDIHRGDR 279


>gi|198422688|ref|XP_002131393.1| PREDICTED: hypothetical protein [Ciona intestinalis]
          Length = 321

 Score = 39.0 bits (89), Expect = 0.79,   Method: Composition-based stats.
 Identities = 35/292 (11%), Positives = 73/292 (25%), Gaps = 50/292 (17%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDK-NFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75
           RI      + +   D+I L E + ++K  F  + L++  + +        +         
Sbjct: 35  RIKVTIDNLAKLKADVIALNEIRIKEKVEFTKQLLENKGFSVFLFWNNENDMSFRNIIAI 94

Query: 76  PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG-NLYLPHGNPITSTKYDDKISWIKRF 134
             +   +    +    +   +    ++     I  + +      +     D K       
Sbjct: 95  SKQSKWNQTKWEHKWVSVNEQNQPCLSNVFSTIQGDQHGRCVGIVYLQHKDTKKQVCVAV 154

Query: 135 LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNM----- 189
                               NI     D     I   D     E ++ FQ+         
Sbjct: 155 SHVVPFGEVKYLQQKALMSLNIDNHKLDPPVSTIIAGDLNRFDEDKEIFQQQIKNFKLQE 214

Query: 190 ---------GFTDAIRATHDTHHLYSFW----------DYYADSWSKNKGIRIDHIMLSP 230
                       + +  T+     ++ W           Y A   S +K   +D  + S 
Sbjct: 215 LQFSKLVIKHSQNNLIRTNKDVGTFNPWPVDKMLYEDKSYMAQPMSYSK---LDLQVCSN 271

Query: 231 EATSLLHSARID-------------------TKPRGWTKPSDHTPVIVSLDI 263
           + T  +  A +                             SDH  V+   +I
Sbjct: 272 DMT--IKQAEVHASMLKPPNLTEPSPGVNEVRHILDKVMSSDHLAVLGEYEI 321


>gi|147866881|emb|CAN78850.1| hypothetical protein VITISV_013214 [Vitis vinifera]
          Length = 1074

 Score = 39.0 bits (89), Expect = 0.79,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 22/61 (36%), Gaps = 9/61 (14%)

Query: 201 THHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
               +++     +    N+   R+D  ++SP             + R     SDH P+++
Sbjct: 138 QGEKFTW-----NGGLNNQAWARLDKFLVSPSWLDQFSGVI---QSRLSRPISDHFPIVL 189

Query: 260 S 260
            
Sbjct: 190 E 190


>gi|115963747|ref|XP_001185059.1| PREDICTED: similar to reverse transcriptase-like protein
           [Strongylocentrotus purpuratus]
          Length = 2519

 Score = 39.0 bits (89), Expect = 0.79,   Method: Composition-based stats.
 Identities = 15/36 (41%), Positives = 23/36 (63%)

Query: 9   WNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKN 44
           WN NS+R + + L  +I ENN DI+ L ET  + ++
Sbjct: 110 WNCNSLRNKTYLLTDYILENNVDIMFLTETWLKSED 145


>gi|108759756|ref|YP_628914.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus
           xanthus DK 1622]
 gi|108463636|gb|ABF88821.1| endonuclease/exonuclease/phosphatase family protein [Myxococcus
           xanthus DK 1622]
          Length = 360

 Score = 39.0 bits (89), Expect = 0.79,   Method: Composition-based stats.
 Identities = 38/336 (11%), Positives = 82/336 (24%), Gaps = 67/336 (19%)

Query: 2   SVVTVATWNVN-------SIRARI---HNLAAWIKENNP--DIICLQETKTE-------- 41
           S + + T+NV         + + +     +AA +   +P  D++CLQE +T         
Sbjct: 34  SPLRIVTYNVRYFGHMLRGLASTVGPKRRVAAALASLDPLPDVVCLQEVETSSLRSNIAD 93

Query: 42  ------DKNFPF------ETLQSLN----YHIETCGQKSY---------NGVAILSKYQP 76
                 +           ET   L     Y         Y          G+A+L   + 
Sbjct: 94  RPKQPGETQLTAFMGRMVETFDRLGREMPYEAFYFRAHHYKLREVSLYTTGLAVLVNTRK 153

Query: 77  IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDK-------IS 129
           +E+ TH  G    +    ++         +      L   +      ++           
Sbjct: 154 LEVATHNVGAPQAITHHHVQRLKDRKQSRICAHMRLLRREDRHPFHIFNTHLSLPTPFAR 213

Query: 130 WIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNM 189
                       +          ++       + Y      N    +   R      +  
Sbjct: 214 EFWATRDKMGGGVNQLHEARKLTEFMQGLTGDEPYIVCGDFNSPPASPVYRYLTTDGRLT 273

Query: 190 GFTDAIRATHDTHHLYSFWDYYADSWSK----NKGIRIDHIMLSPEATSL-LHSARIDTK 244
               A+                +  +      +  + +DH+        L          
Sbjct: 274 CAQAAVGQIDPNV---------SRGFPTAGFLHMRMHLDHVFSGAGVRWLDTQETSPFGD 324

Query: 245 PRGWTKP-SDHTPVIVSLDIPEPRKKQQDSTSQNMK 279
            R      SDH P++    +   +       +  + 
Sbjct: 325 LRSRFHGLSDHMPIVARFALDSGKTLITPPPTSLLL 360


>gi|56758758|gb|AAW27519.1| SJCHGC06222 protein [Schistosoma japonicum]
          Length = 213

 Score = 39.0 bits (89), Expect = 0.79,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 28/92 (30%), Gaps = 2/92 (2%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDK--NFPFETLQSLNYHIETCGQKSYNGVAILSKY 74
           R++ +A+ +   + D+I LQE   E               Y           G+ I SK+
Sbjct: 28  RVNAIASKLANGDFDVILLQEIWLESDYRKLRLLLDDKYPYSNYFYCNLIGTGMCIFSKW 87

Query: 75  QPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
               + TH    +           +      L
Sbjct: 88  IIECVFTHPFTTNGYPHLIHQADYYCGKGIGL 119


>gi|45267888|gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|54291856|gb|AAV32224.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 1936

 Score = 39.0 bits (89), Expect = 0.79,   Method: Composition-based stats.
 Identities = 31/283 (10%), Positives = 80/283 (28%), Gaps = 34/283 (12%)

Query: 4   VTVATWNVNSI--RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           ++   WN   +   A + +L A I++    ++ L ET+   +       +          
Sbjct: 636 MSCLAWNCRGLGNTATVQDLRALIQKAGSQLVFLCETRQSVEKMSRLRRKLAFRGFVGVS 695

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
            +  +G   L   + + +               +         T         +G P   
Sbjct: 696 SEGKSGGLALYWDESVSVDVKDINKRYIDAYVRLSPDEPQWHITFV-------YGEPRVE 748

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
            ++             A   + + +       +              +  +     +++ 
Sbjct: 749 NRHRMWSLLRTIRQSSALPWMVIGDFNETLWQFE------------HFSKNPRCETQMQN 796

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
               L +    D              +D   D W +N  +R+D  +   +   L   A++
Sbjct: 797 FRDALYDCDLQDLGFKGVPHT-----YDNRRDGW-RNVKVRLDRAVADDKWRDLFPEAQV 850

Query: 242 DTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTS----QNMKP 280
                  +  SDH+P+++   + +  + +Q           +P
Sbjct: 851 SHLV---SPCSDHSPILLEFIVKDTTRPRQKCLHYEIVWEREP 890


>gi|303314689|ref|XP_003067353.1| Endonuclease/Exonuclease/phosphatase family protein [Coccidioides
           posadasii C735 delta SOWgp]
 gi|240107021|gb|EER25208.1| Endonuclease/Exonuclease/phosphatase family protein [Coccidioides
           posadasii C735 delta SOWgp]
          Length = 290

 Score = 39.0 bits (89), Expect = 0.80,   Method: Composition-based stats.
 Identities = 33/262 (12%), Positives = 67/262 (25%), Gaps = 27/262 (10%)

Query: 17  RIHNLAAWI---KENNPD-IICLQET-KTEDKNFPFETLQSLNYHIETCGQKSYNGVAIL 71
           R H +   +     +N +  ICLQE  + + +    + L  LN H +T            
Sbjct: 33  RKHLVLNELIFHTRHNAESFICLQEVLRVQLE----DVLSGLNSHGDTWAYIGVGRDDGK 88

Query: 72  SKYQPIEIVTHLPGD--------DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
              +   I                L          +   +  +    ++    +  T   
Sbjct: 89  QAGEYSPIFYRPDVWKLETWETVWLSETPEVPSKGWDAASIRIVTVGVFRHRASRKTVLA 148

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
               +       R+ S +L L     +   +               E +           
Sbjct: 149 MSTHLDDQGSKSRYESAKLILRTIDGYLHKFKDRISGLFLAGDFNSEVNQEAYQVFIDPT 208

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP----EATSLLHSA 239
             L +          +     Y+ + Y  +  +     RID+I++ P         +   
Sbjct: 209 SPLVDARDQIKPDERYGNEITYTGFGYEGERET-----RIDYILVGPKTEQGFPWTVKQY 263

Query: 240 RIDTKPRGWTKP-SDHTPVIVS 260
            +           SDH  V+  
Sbjct: 264 GVLPNKFDDGVFSSDHRAVVAD 285


>gi|114762656|ref|ZP_01442090.1| endonuclease/exonuclease/phosphatase family protein [Pelagibaca
           bermudensis HTCC2601]
 gi|114544566|gb|EAU47572.1| endonuclease/exonuclease/phosphatase family protein [Roseovarius
           sp. HTCC2601]
          Length = 333

 Score = 39.0 bits (89), Expect = 0.80,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 12/53 (22%)

Query: 223 IDHIMLSPEATSLLHSARIDT---KPRGWTKP---------SDHTPVIVSLDI 263
           +D+IM+S +      S RI      P  W  P         SDH PV + +D+
Sbjct: 281 LDYIMVSEDLARTRPSWRIWHPFDDPVCWRTPELREALLDASDHFPVTLDIDL 333


>gi|326672568|ref|XP_003199694.1| PREDICTED: RNA-directed DNA polymerase from mobile element
           jockey-like [Danio rerio]
          Length = 1049

 Score = 39.0 bits (89), Expect = 0.81,   Method: Composition-based stats.
 Identities = 31/243 (12%), Positives = 68/243 (27%), Gaps = 14/243 (5%)

Query: 25  IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLP 84
           +   N DI  LQET+  D     E  +   ++ +           +    +   +    P
Sbjct: 25  LLRLNVDIAALQETRLADSGTLKE--KDYTFYWQGRAPDEPRQHGVAFAVKNNLLSMVEP 82

Query: 85  GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL 144
           G +   +   +    T    TL        +    T  K+   ++ +   +    Q + L
Sbjct: 83  GRNGTERLLTLRLNTTTGPLTLVSVYAPTLNATLETKDKFYGNLTSVINNIPDKEQLVLL 142

Query: 145 EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL 204
                F        +                  +         N+   ++   T   H +
Sbjct: 143 G---DFNARVGANHESWPSCLGKFGIGKMNENGQRLLELCAFHNLCIANSYFQTKPQHKV 199

Query: 205 YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
            S+    +  W +     +D I++   A + +               +DH+ V   + + 
Sbjct: 200 -SWRHPRSKHWHQ-----LDLILVRRSAINCVLHV---RSYHSADCDTDHSLVCCKIRLN 250

Query: 265 EPR 267
             R
Sbjct: 251 PKR 253


>gi|295090629|emb|CBK76736.1| Metal-dependent hydrolase [Clostridium cf. saccharolyticum K10]
          Length = 324

 Score = 39.0 bits (89), Expect = 0.81,   Method: Composition-based stats.
 Identities = 36/305 (11%), Positives = 72/305 (23%), Gaps = 56/305 (18%)

Query: 4   VTVATWNVNSIR-----ARIHNLAAWIKENNPDIICLQETK--TEDKNFPFETLQSLNYH 56
           + + T N +S+       ++      I +  PD+I LQE     + +    E L+   + 
Sbjct: 1   MKLLTLNTHSLEEKDYEKKLKIFTEEILKEKPDVIALQEVNQPLDGEEADGEVLKKSGFI 60

Query: 57  -IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
              +        V + +       +    G  +       +  +    + + + +     
Sbjct: 61  PCPSEPPSCAVPVRLGNHGLRAAQLLRRSGFPVFWTWTSAKVGYGKYDEGMALMSRRPIA 120

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
                        +  K     A      +     +  +              +      
Sbjct: 121 EVSQLFLTDGRDYNNWKTRKALAITLNIGKGEEPVS--FVTAHMGWWKDEEEPFSRQWER 178

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHL-Y-----SFWD--YYADSWSKN--------- 218
                 S ++  ++                Y     S W   Y A               
Sbjct: 179 LDAFASSLRRRADVWLMGDFNTQDSVRGEGYDRITASGWTDAYRAAGKRDGGITVPGAID 238

Query: 219 --------KGIRIDHIMLSPEATSLLHSARIDTKPRGW---------------TKPSDHT 255
                    G+RID+I          H +  D K RG                   SDH 
Sbjct: 239 GWREDGEVPGMRIDYIW-----YGRKHDSG-DRKSRGDVLIEEVRTVFNGSDCPAVSDHF 292

Query: 256 PVIVS 260
            V+  
Sbjct: 293 GVLAE 297


>gi|326667425|ref|XP_003198594.1| PREDICTED: RNA-directed DNA polymerase from mobile element
           jockey-like [Danio rerio]
          Length = 1049

 Score = 39.0 bits (89), Expect = 0.81,   Method: Composition-based stats.
 Identities = 31/243 (12%), Positives = 68/243 (27%), Gaps = 14/243 (5%)

Query: 25  IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLP 84
           +   N DI  LQET+  D     E  +   ++ +           +    +   +    P
Sbjct: 25  LLRLNVDIAALQETRLADSGTLKE--KDYTFYWQGRAPDEPRQHGVAFAVKNNLLSMVEP 82

Query: 85  GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL 144
           G +   +   +    T    TL        +    T  K+   ++ +   +    Q + L
Sbjct: 83  GRNGTERLLTLRLNTTTGPLTLVSVYAPTLNATLETKDKFYGNLTSVINNIPDKEQLVLL 142

Query: 145 EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL 204
                F        +                  +         N+   ++   T   H +
Sbjct: 143 G---DFNARVGANHESWPSCLGKFGIGKMNENGQRLLELCAFHNLCIANSYFQTKPQHKV 199

Query: 205 YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
            S+    +  W +     +D I++   A + +               +DH+ V   + + 
Sbjct: 200 -SWRHPRSKHWHQ-----LDLILVRRSAINCVLHV---RSYHSADCDTDHSLVCCKIRLN 250

Query: 265 EPR 267
             R
Sbjct: 251 PKR 253


>gi|325925887|ref|ZP_08187256.1| putative extracellular nuclease [Xanthomonas perforans 91-118]
 gi|325543718|gb|EGD15132.1| putative extracellular nuclease [Xanthomonas perforans 91-118]
          Length = 572

 Score = 39.0 bits (89), Expect = 0.81,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 14/56 (25%)

Query: 222 RIDHIMLSPEATSLLHSA---RIDTKPR-----------GWTKPSDHTPVIVSLDI 263
           R+DH +LSP     L  A    I+               G  + SDH PV+++  +
Sbjct: 517 RLDHALLSPAMAKQLRGAAEWHINADVMDDAGYAKRNLPGPWRSSDHDPVLLAFSL 572


>gi|254883062|ref|ZP_05255772.1| glycosyl hydrolase family 109 protein 5 [Bacteroides sp. 4_3_47FAA]
 gi|254835855|gb|EET16164.1| glycosyl hydrolase family 109 protein 5 [Bacteroides sp. 4_3_47FAA]
          Length = 508

 Score = 39.0 bits (89), Expect = 0.81,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 31/104 (29%), Gaps = 9/104 (8%)

Query: 151 AGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWD- 209
             D  I        + +I EN      E+       Q +            H+L  FWD 
Sbjct: 165 CWDL-INLSEKTRKHCMILENCCYDWFEMNTLNMAQQGVFGEVIRAQGAYIHNLSPFWDH 223

Query: 210 YYADSWSKNKGIRIDH-------IMLSPEATSLLHSARIDTKPR 246
           Y+ +      G R+D+       +  +     +  +  I    R
Sbjct: 224 YWKNGKEDKLGWRLDYNMKHRGDVYATHGLGPVAQALDIHRGDR 267


>gi|315636836|ref|ZP_07892061.1| endonuclease/exonuclease/phosphatase [Arcobacter butzleri JV22]
 gi|315478890|gb|EFU69598.1| endonuclease/exonuclease/phosphatase [Arcobacter butzleri JV22]
          Length = 526

 Score = 39.0 bits (89), Expect = 0.82,   Method: Composition-based stats.
 Identities = 44/282 (15%), Positives = 75/282 (26%), Gaps = 39/282 (13%)

Query: 34  CLQETKTED-KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQA 92
            LQE + +D      + L    Y        S  G+  LSK +     +        +  
Sbjct: 79  GLQEIENKDLMQLLQKKLPKYKYFSFIKYPDSAVGLGFLSKVEIKNSSSIDVKFTDKLFR 138

Query: 93  RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG 152
             +E TF       +I N + P      + +     +   R       +L  +   I  G
Sbjct: 139 PILETTFIYENIEFKIFNNHWPSKAAAENYRIKYAKTLQDR-----LLKLPKDYDYILLG 193

Query: 153 DYNIIPQPHD-CYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFW--- 208
           D+N      +     +     +  T         + +   T       +    Y+ W   
Sbjct: 194 DFNSNYNEFETFKKDLKLNLTSGVTGINHVLNTIIDDHFITYDDILKEEKKVHYNLWLDI 253

Query: 209 --DYYADSWSKNKGIRIDHIMLSPEATSL------LHSARIDT----------------- 243
                  +  KN+    D+I+LS              S  +                   
Sbjct: 254 KTSERFSTKFKNQNNTPDNIILSSSLFDNKNLTYIKKSFEVFKPNYLYENGEVKRWKMTQ 313

Query: 244 ----KPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
               K       SDH P+     I E   K      +N+  I
Sbjct: 314 DRNIKIHKGEGFSDHLPIFAKFSINENITKNNPQVEENLSTI 355


>gi|85375016|ref|YP_459078.1| hypothetical protein ELI_10945 [Erythrobacter litoralis HTCC2594]
 gi|84788099|gb|ABC64281.1| hypothetical protein ELI_10945 [Erythrobacter litoralis HTCC2594]
          Length = 333

 Score = 39.0 bits (89), Expect = 0.82,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 22/79 (27%), Gaps = 9/79 (11%)

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
                   F +            ++      SW+   G  +DHI +       + +  + 
Sbjct: 256 PWSKTTEQFREMGNYGDPRAGRGTYPT--FPSWAGKFGWPLDHIFVKGGL--HVRNFAVL 311

Query: 243 TKPRGWTKPSDHTPVIVSL 261
                    SDH P+   +
Sbjct: 312 DDV-----GSDHRPLAADI 325


>gi|319788340|ref|YP_004147815.1| endonuclease/exonuclease/phosphatase [Pseudoxanthomonas suwonensis
           11-1]
 gi|317466852|gb|ADV28584.1| Endonuclease/exonuclease/phosphatase [Pseudoxanthomonas suwonensis
           11-1]
          Length = 276

 Score = 39.0 bits (89), Expect = 0.83,   Method: Composition-based stats.
 Identities = 13/96 (13%), Positives = 28/96 (29%), Gaps = 14/96 (14%)

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
             +A    +        +                + +F  +            IDHI++S
Sbjct: 190 HPNAVLMGDFNCLPDVPEMELLYRTTSLRPPECVVPTFPSWKPQ-------RAIDHILVS 242

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
            +       A+           SDH  + + +++PE
Sbjct: 243 GDL--RCAGAKALPAA-----FSDHLALAMDIEVPE 271


>gi|298204337|gb|ADI61817.1| endonuclease-reverse transcriptase [Bombyx mori]
          Length = 989

 Score = 39.0 bits (89), Expect = 0.83,   Method: Composition-based stats.
 Identities = 35/263 (13%), Positives = 67/263 (25%), Gaps = 26/263 (9%)

Query: 6   VATWNVNSIRARIH--NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           +AT+NV ++R       L   +     DI+ L E +  +             +       
Sbjct: 49  LATYNVRTLRTDEKIVELEEELSRLRWDIVGLSEVR-REGEDTITLRSGNLLYFREGDHL 107

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           S  GV        +  V  +      V    +  T   + + +++      H +    T 
Sbjct: 108 SQGGVGFFVHKSLVNNVLKIESVSTRVVYLVLRITKKYSLKIIQVYAPTSAHSDDEVETM 167

Query: 124 YD---DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
           Y+     +   K  +                G+  + P      N            E  
Sbjct: 168 YEDISRAMHSFKTHITIVMGDFNARLGKRSEGELRVGPFGFGNRNHRGNLLAGFMEKEEL 227

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
                                           +   KN+   ID IM +     + +   
Sbjct: 228 FMMNSFFQKRNHRKWTWMSP------------NGAIKNE---IDFIMSTKR--QIFNDVS 270

Query: 241 IDTKPRGWTKPSDHTPVIVSLDI 263
           +          SDH  V  +L++
Sbjct: 271 VINMV---KTGSDHRMVRGTLNL 290


>gi|146171520|ref|XP_001017972.2| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena
           thermophila]
 gi|146145002|gb|EAR97727.2| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena
           thermophila SB210]
          Length = 892

 Score = 39.0 bits (89), Expect = 0.83,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 9/47 (19%)

Query: 1   MSVVTV--ATWNVNSIRA--RIHNLAAWIK---ENNPDIIC--LQET 38
            S + V   TWNVN + A  +I    ++     ++ PD++C  LQE 
Sbjct: 538 FSKIKVFVITWNVNGLEAPSQIDQNGSFFAFDPKDTPDVVCVGLQEI 584


>gi|301309757|ref|ZP_07215696.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
          sp. 20_3]
 gi|300831331|gb|EFK61962.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
          sp. 20_3]
          Length = 628

 Score = 39.0 bits (89), Expect = 0.83,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 22/43 (51%), Gaps = 7/43 (16%)

Query: 2  SVVTVATWNV-NSIR-----ARIHNLAAWIKENNPDIICLQET 38
          + + + ++N+ N  R       +  +A  I++  PD++ +QE 
Sbjct: 40 NTLRIMSYNIRNG-RGMDEVTDLGRIAEAIRKVAPDVVAVQEV 81


>gi|297699068|ref|XP_002826638.1| PREDICTED: sphingomyelin phosphodiesterase 3-like [Pongo abelii]
          Length = 630

 Score = 39.0 bits (89), Expect = 0.83,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 63/269 (23%), Gaps = 43/269 (15%)

Query: 31  DIICLQE-------TKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHL 83
           D +CLQE       TK   +       + + Y +   G +       L+          +
Sbjct: 358 DFLCLQEVFDKRAATKL-KEQLHG-YFEYILYDVGVYGCQGCCSFKCLNSGLLFASRYPI 415

Query: 84  PGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLE 143
                             +   L +          +   +              A+   E
Sbjct: 416 MDVAYHCYPNKCNDDALASKGALFLKKDSAIRCGQLDLLQDWLADFRKYTSSSSAANPEE 475

Query: 144 LEEPLIFAGDYNI-----------IPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192
           L    +  GD+N                   Y                 +      +   
Sbjct: 476 LVAFDVVCGDFNFDNCSSDDKLEQQHSLFTHYRDPCRLGPGEEKPWAIGTLLDTNGLYDE 535

Query: 193 DAIRATH--------DTHHLY----SFWDYYADSWS---KNKGIRIDHIM-----LSPEA 232
           D     +        +    Y    +             K  G RID+++     L P+ 
Sbjct: 536 DVCTPDNLQKVLESEEGRREYLAFPTSKSSGQKGRKELLKGNGRRIDYMLHAEEGLCPDW 595

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
            + +      T+  G T   DH PV + L
Sbjct: 596 KAEVEEFSFITQLSGLT---DHLPVAMRL 621


>gi|255956321|ref|XP_002568913.1| Pc21g19220 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211590624|emb|CAP96819.1| Pc21g19220 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 289

 Score = 39.0 bits (89), Expect = 0.83,   Method: Composition-based stats.
 Identities = 28/248 (11%), Positives = 68/248 (27%), Gaps = 25/248 (10%)

Query: 32  IICLQET----------KT-EDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80
            +CLQE           +  +D        + +   +           + +     +  +
Sbjct: 51  FLCLQEVLHNQLGDILARLNQDAELETPEWEYIG--VGRDDGHEAGEYSPIIYRPAVWEL 108

Query: 81  THLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQ 140
            H     L         ++   +  +    ++    +  T    +  +       RF + 
Sbjct: 109 LHWETVWLSKTPETPSKSWDAASIRIVTIGVFTHRASRNTVLAMNTHLDDQGSQSRFEAA 168

Query: 141 RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHD 200
           R+ +++   ++ +                          ++  + L +          + 
Sbjct: 169 RIIIDKISEYSQNKFAKLISGTFLAGDFN--SEENQEAYQELTRSLLDAYKQIESSRRYG 226

Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK-----PSDHT 255
            H  ++ + Y           RID++++ P        A I     G         SDH 
Sbjct: 227 NHITWTGFGY-----EDEPASRIDYVLVRPTGAQGQRLAVIGYAVLGNRFDDGVLSSDHR 281

Query: 256 PVIVSLDI 263
            VIV L +
Sbjct: 282 AVIVDLTL 289


>gi|281207457|gb|EFA81640.1| ankyrin repeat-containing protein [Polysphondylium pallidum PN500]
          Length = 1696

 Score = 39.0 bits (89), Expect = 0.84,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 25/59 (42%), Gaps = 11/59 (18%)

Query: 221  IRIDHIMLSPEAT---SLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQ 276
             R+D I ++         + +   D         SDH P+ V +++  P+  + + T++
Sbjct: 984  RRLDRIYVASTMLGSNPAVATYFHDK--------SDHCPISVDINLSIPKIDESEKTNE 1034


>gi|222629518|gb|EEE61650.1| hypothetical protein OsJ_16098 [Oryza sativa Japonica Group]
          Length = 393

 Score = 39.0 bits (89), Expect = 0.84,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 2/43 (4%)

Query: 1  MSVVTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTE 41
          MS ++V  WNV  +   A+   +   +  ++  ++CLQE+K E
Sbjct: 1  MSRLSVLVWNVRGLNNPAKRRVVKESVVNSHASVVCLQESKLE 43


>gi|260061623|ref|YP_003194703.1| Endonuclease/exonuclease/phosphatase [Robiginitalea biformata
           HTCC2501]
 gi|88785755|gb|EAR16924.1| Endonuclease/exonuclease/phosphatase [Robiginitalea biformata
           HTCC2501]
          Length = 370

 Score = 39.0 bits (89), Expect = 0.84,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 19/58 (32%), Gaps = 8/58 (13%)

Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD-IPEPRKKQQDSTSQN 277
             +DHI    E    L    +          SDH PV + LD  PE    Q    +  
Sbjct: 287 WPLDHIFAHREF--RLRDLEVMPDI-----GSDHFPVYIHLDYFPEGAGDQSPEPASE 337


>gi|84686218|ref|ZP_01014113.1| possible Endonuclease/Exonuclease/phosphatase fa [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84665745|gb|EAQ12220.1| possible Endonuclease/Exonuclease/phosphatase fa [Rhodobacterales
           bacterium HTCC2654]
          Length = 343

 Score = 39.0 bits (89), Expect = 0.84,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 12/53 (22%)

Query: 223 IDHIMLSPEATSLLHSARIDT-----------KPR-GWTKPSDHTPVIVSLDI 263
           +D+IM+SP+  +     RI             + R      SDH PV + +D+
Sbjct: 291 LDYIMVSPDLLASKPDWRIWHPFDDPVCYRTIELREALLTASDHFPVSIDIDL 343


>gi|323307425|gb|EGA60699.1| Inp52p [Saccharomyces cerevisiae FostersO]
          Length = 1103

 Score = 39.0 bits (89), Expect = 0.85,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 7/37 (18%)

Query: 8   TWNVNSIRARIHNLAAWI----KENNPDII--CLQET 38
           T+NVN   +R  +L+ W+     +  PD++   LQE 
Sbjct: 597 TFNVNG-NSRRADLSEWLFPIGDKFKPDVVVLGLQEV 632


>gi|320037679|gb|EFW19616.1| endonuclease/exonuclease/phosphatase [Coccidioides posadasii str.
           Silveira]
          Length = 290

 Score = 39.0 bits (89), Expect = 0.85,   Method: Composition-based stats.
 Identities = 33/262 (12%), Positives = 67/262 (25%), Gaps = 27/262 (10%)

Query: 17  RIHNLAAWI---KENNPD-IICLQET-KTEDKNFPFETLQSLNYHIETCGQKSYNGVAIL 71
           R H +   +     +N +  ICLQE  + + +    + L  LN H +T            
Sbjct: 33  RKHLVLNELIFHTRHNAESFICLQEVLRVQLE----DVLSGLNSHGDTWAYIGVGRDDGK 88

Query: 72  SKYQPIEIVTHLPGD--------DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
              +   I                L          +   +  +    ++    +  T   
Sbjct: 89  QAGEYSPIFYRPDVWKLETWETVWLSETPEVPSKGWDAASIRIVTVGVFRHRASRKTVLA 148

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
               +       R+ S +L L     +   +               E +           
Sbjct: 149 MTTHLDDQGSGSRYESAKLILRTIDGYLHKFKDRISGLFLAGDFNSEVNQEAYQVFIDPT 208

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP----EATSLLHSA 239
             L +          +     Y+ + Y  +  +     RID+I++ P         +   
Sbjct: 209 SPLVDARDQIKPDERYGNEITYTGFGYEGERET-----RIDYILVGPKTEQGFPWTVKQY 263

Query: 240 RIDTKPRGWTKP-SDHTPVIVS 260
            +           SDH  V+  
Sbjct: 264 GVLPNKFDDGVFSSDHRAVVAD 285


>gi|259149255|emb|CAY82497.1| Inp52p [Saccharomyces cerevisiae EC1118]
          Length = 1183

 Score = 39.0 bits (89), Expect = 0.85,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 7/37 (18%)

Query: 8   TWNVNSIRARIHNLAAWI----KENNPDII--CLQET 38
           T+NVN   +R  +L+ W+     +  PD++   LQE 
Sbjct: 597 TFNVNG-NSRRADLSEWLFPIGDKFKPDVVVLGLQEV 632


>gi|151944429|gb|EDN62707.1| inositol polyphosphate 5-phosphatase [Saccharomyces cerevisiae
           YJM789]
          Length = 1183

 Score = 39.0 bits (89), Expect = 0.85,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 7/37 (18%)

Query: 8   TWNVNSIRARIHNLAAWI----KENNPDII--CLQET 38
           T+NVN   +R  +L+ W+     +  PD++   LQE 
Sbjct: 597 TFNVNG-NSRRADLSEWLFPIGDKFKPDVVVLGLQEV 632


>gi|30682419|ref|NP_563894.2| endonuclease/exonuclease/phosphatase family protein [Arabidopsis
           thaliana]
 gi|4835775|gb|AAD30241.1|AC007296_2 EST gb|F14156 comes from this gene [Arabidopsis thaliana]
 gi|22135816|gb|AAM91094.1| At1g11800/F25C20_3 [Arabidopsis thaliana]
 gi|23308397|gb|AAN18168.1| At1g11800/F25C20_3 [Arabidopsis thaliana]
 gi|332190667|gb|AEE28788.1| endonuclease/exonuclease/phosphatase-like protein [Arabidopsis
           thaliana]
          Length = 441

 Score = 39.0 bits (89), Expect = 0.85,   Method: Composition-based stats.
 Identities = 38/288 (13%), Positives = 80/288 (27%), Gaps = 52/288 (18%)

Query: 4   VTVATWNVNS-----IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           + + ++NV       +  R+  +   I+ ++P +IC QE     +   ++  +  N+   
Sbjct: 173 LKILSYNVWFREDLELNLRMRAIGHLIQLHSPHLICFQEV--TPEI--YDIFRKSNWWKA 228

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
                S +       Y  +     +                +I  + L I  + +P   P
Sbjct: 229 YSCSVSVDVAVSRGYYCMLLSKLGVKSFSSKSFGN------SIMGRELSIAEVEVPGRKP 282

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
           +           +       S      +         +              N       
Sbjct: 283 L-----------VFATSHLESPCPGPPKWDQMFSRERVEQAKEAIEILRPNANVIFGGDM 331

Query: 179 VRQSF---QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI--RIDHIM------ 227
                   +      + D           +++        S N+ +  R+D I+      
Sbjct: 332 NWCDKLDGKFPLPDKWVDVWEVLKPGDLGFTYDTKANPMLSGNRALQKRLDRILCRLDDY 391

Query: 228 -------LSPEATSLLHSARIDTKPRGWTK-------PSDHTPVIVSL 261
                  +  EA   L   + + K RG  K       PSDH  ++V+L
Sbjct: 392 KLGGIEMVGKEAIPGLSYVK-EKKVRGDIKKLELPVLPSDHFGLLVTL 438


>gi|321453050|gb|EFX64329.1| hypothetical protein DAPPUDRAFT_118284 [Daphnia pulex]
          Length = 572

 Score = 39.0 bits (89), Expect = 0.86,   Method: Composition-based stats.
 Identities = 11/38 (28%), Positives = 18/38 (47%), Gaps = 2/38 (5%)

Query: 3   VVTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQET 38
           ++ V + N+  I     +  L  +   N  D+ICLQE 
Sbjct: 205 IMKVTSINIARISTPECLQLLLNYCVSNEFDVICLQEV 242


>gi|319643580|ref|ZP_07998200.1| glycosyl hydrolase family 109 protein 5 [Bacteroides sp. 3_1_40A]
 gi|317384749|gb|EFV65708.1| glycosyl hydrolase family 109 protein 5 [Bacteroides sp. 3_1_40A]
          Length = 502

 Score = 39.0 bits (89), Expect = 0.86,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 31/104 (29%), Gaps = 9/104 (8%)

Query: 151 AGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWD- 209
             D  I        + +I EN      E+       Q +            H+L  FWD 
Sbjct: 159 CWDL-INLSEKTRKHCMILENCCYDWFEMNTLNMAQQGVFGEVIRAQGAYIHNLSPFWDH 217

Query: 210 YYADSWSKNKGIRIDH-------IMLSPEATSLLHSARIDTKPR 246
           Y+ +      G R+D+       +  +     +  +  I    R
Sbjct: 218 YWKNGKEDKLGWRLDYNMKHRGDVYATHGLGPVAQALDIHRGDR 261


>gi|271498824|ref|YP_003331849.1| endonuclease/exonuclease/phosphatase [Dickeya dadantii Ech586]
 gi|270342379|gb|ACZ75144.1| Endonuclease/exonuclease/phosphatase [Dickeya dadantii Ech586]
          Length = 380

 Score = 39.0 bits (89), Expect = 0.86,   Method: Composition-based stats.
 Identities = 36/268 (13%), Positives = 74/268 (27%), Gaps = 39/268 (14%)

Query: 25  IKENNPDIICLQETK----TED--KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIE 78
           I     DI+C  E +      D  +    +   +    I++        VA L++++  +
Sbjct: 122 INALKADILCAAEVENMAVLHDFNQQILADQAFAQYVMIDSPNDPRGIDVACLTRHRITQ 181

Query: 79  IVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFA 138
           + TH+          F           + I        + + +          +   R A
Sbjct: 182 LRTHIFDTSASFSPLFSRDCLE-----VTIDIGLTQPVHVLCNHFKSQNGRNDEERERSA 236

Query: 139 SQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRAT 198
            +R    E +        + Q +      + E+ A     +   F         D     
Sbjct: 237 RRRHAQAERVADIVRGYNLQQEYVVVMGDLNEDSANPWHSLAPLFSVADLHPVVDPAL-- 294

Query: 199 HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT--------------- 243
                 Y++  Y++   S  +  ++D+I +S           I+                
Sbjct: 295 -PETARYTY--YFSGGKSGERLNQLDYIFISTPLHQAKVDWGIERRGIYNIDKIAAKEGA 351

Query: 244 -------KPRGWTKP-SDHTPVIVSLDI 263
                      W    SDH  + V  D+
Sbjct: 352 DPVTPFPTVTSWDTAASDHAAIWVECDL 379


>gi|222616232|gb|EEE52364.1| hypothetical protein OsJ_34428 [Oryza sativa Japonica Group]
          Length = 1102

 Score = 39.0 bits (89), Expect = 0.86,   Method: Composition-based stats.
 Identities = 18/130 (13%), Positives = 41/130 (31%), Gaps = 13/130 (10%)

Query: 157 IPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS 216
                     +   ++  + +    +    Q   F+   R        +++ D       
Sbjct: 548 RHNMWSMLRSLRNSSNLPWLVIGDFNEALWQFEHFSSHPRGEPQMGTPFTY-DNKRQGR- 605

Query: 217 KNKGIRIDHIMLSPEATSLLHSARI--DTKPRGWTKPSDHTPVIVSL--DIPEPRKKQ-- 270
            N  +R+D  +          +A +     PR     SDH P+ + L  ++ +P +K+  
Sbjct: 606 NNVRVRLDRAIADNAWRDTFPNATLAHLASPR-----SDHCPISLQLSQEMKQPARKKIL 660

Query: 271 QDSTSQNMKP 280
                   +P
Sbjct: 661 HYEICWEREP 670


>gi|167619815|ref|ZP_02388446.1| endonuclease/exonuclease/phosphatase family superfamily protein
          [Burkholderia thailandensis Bt4]
          Length = 160

 Score = 39.0 bits (89), Expect = 0.86,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 18/48 (37%), Gaps = 20/48 (41%)

Query: 4  VTVATWNV------NS-------IRARIHNLAAWIKENNPDIICLQET 38
          + + +WN+      N        I A    L  +      D++C+QE 
Sbjct: 1  MRLISWNIQWGRDANGTVDLARTIDAA-RGLGDF------DVLCMQEV 41


>gi|167581699|ref|ZP_02374573.1| endonuclease/exonuclease/phosphatase family superfamily protein
          [Burkholderia thailandensis TXDOH]
          Length = 101

 Score = 39.0 bits (89), Expect = 0.86,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 18/48 (37%), Gaps = 20/48 (41%)

Query: 4  VTVATWNV------NS-------IRARIHNLAAWIKENNPDIICLQET 38
          + + +WN+      N        I A    L  +      D++C+QE 
Sbjct: 1  MRLISWNIQWGRDANGTVDLARTIDAA-RGLGDF------DVLCMQEV 41


>gi|28198568|ref|NP_778882.1| hypothetical protein PD0660 [Xylella fastidiosa Temecula1]
 gi|28056652|gb|AAO28531.1| conserved hypothetical protein [Xylella fastidiosa Temecula1]
 gi|307579699|gb|ADN63668.1| endonuclease/exonuclease/phosphatase [Xylella fastidiosa subsp.
           fastidiosa GB514]
          Length = 246

 Score = 39.0 bits (89), Expect = 0.86,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 18/49 (36%), Gaps = 11/49 (22%)

Query: 221 IR----IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
            R    IDHI++S           I          SDH  V + L IP+
Sbjct: 201 WRPERAIDHILVSEGF-------YICKTEAVPAAFSDHLAVSMDLVIPQ 242


>gi|71897607|ref|ZP_00679852.1| Endonuclease/exonuclease/phosphatase [Xylella fastidiosa Ann-1]
 gi|182681249|ref|YP_001829409.1| endonuclease/exonuclease/phosphatase [Xylella fastidiosa M23]
 gi|71732510|gb|EAO34563.1| Endonuclease/exonuclease/phosphatase [Xylella fastidiosa Ann-1]
 gi|182631359|gb|ACB92135.1| Endonuclease/exonuclease/phosphatase [Xylella fastidiosa M23]
          Length = 256

 Score = 39.0 bits (89), Expect = 0.86,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 18/49 (36%), Gaps = 11/49 (22%)

Query: 221 IR----IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
            R    IDHI++S           I          SDH  V + L IP+
Sbjct: 211 WRPERAIDHILVSEGF-------YICKTEAVPAAFSDHLAVSMDLVIPQ 252


>gi|77553854|gb|ABA96650.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1100

 Score = 38.6 bits (88), Expect = 0.87,   Method: Composition-based stats.
 Identities = 23/151 (15%), Positives = 49/151 (32%), Gaps = 8/151 (5%)

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
                I     +D+ +   R      +    E   ++     I P     +  +   N+A
Sbjct: 194 YTNRHIDVLVKEDRSAMQWRCTFVYGEPKAHERHNMWTLLRRIKPNSTAPWCLMGDFNEA 253

Query: 174 CFTLEVR----QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIML 228
            +  E      +  +++ +     +     D   + + W Y        N  +R+D  + 
Sbjct: 254 MWQFEHFSEHKRKEKQMLDFREILSHCDVFDLGFIGTPWTYDNKRKGGYNVRVRLDRAVA 313

Query: 229 SPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
           S   + L   A++          SDH P++V
Sbjct: 314 SQSWSVLYPQAQVRHLVSSR---SDHCPILV 341


>gi|284034341|ref|YP_003384272.1| endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836]
 gi|283813634|gb|ADB35473.1| Endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836]
          Length = 272

 Score = 38.6 bits (88), Expect = 0.88,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 7/42 (16%)

Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           RID+++ S        SA +       T  SDH PV+ +  +
Sbjct: 237 RIDYLLHSAALRP--TSASV-----PATLASDHLPVVATFTL 271


>gi|150004584|ref|YP_001299328.1| putative oxidoreductase [Bacteroides vulgatus ATCC 8482]
 gi|205749538|sp|A6L1Z2|G1095_BACV8 RecName: Full=Glycosyl hydrolase family 109 protein 5; Flags:
           Precursor
 gi|149933008|gb|ABR39706.1| putative oxidoreductase [Bacteroides vulgatus ATCC 8482]
          Length = 520

 Score = 38.6 bits (88), Expect = 0.88,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 31/104 (29%), Gaps = 9/104 (8%)

Query: 151 AGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWD- 209
             D  I        + +I EN      E+       Q +            H+L  FWD 
Sbjct: 177 CWDL-INLSEKTRKHCMILENCCYDWFEMNTLNMAQQGVFGEVIRAQGAYIHNLSPFWDH 235

Query: 210 YYADSWSKNKGIRIDH-------IMLSPEATSLLHSARIDTKPR 246
           Y+ +      G R+D+       +  +     +  +  I    R
Sbjct: 236 YWKNGKEDKLGWRLDYNMKHRGDVYATHGLGPVAQALDIHRGDR 279


>gi|125718607|ref|YP_001035740.1| hypothetical protein SSA_1808 [Streptococcus sanguinis SK36]
 gi|125498524|gb|ABN45190.1| Conserved hypothetical protein [Streptococcus sanguinis SK36]
          Length = 271

 Score = 38.6 bits (88), Expect = 0.88,   Method: Composition-based stats.
 Identities = 27/254 (10%), Positives = 64/254 (25%), Gaps = 29/254 (11%)

Query: 18  IHNLAAWIKENNPDIICLQETK--TEDKNFPFETLQSLNYHIETCGQKSYNGVAILS--- 72
           ++ LA  I +   D+ICLQE    TE +           Y       + +     L    
Sbjct: 21  LNQLAERILQEKYDVICLQEVNQLTESEQVVQAPF----YQAVEGAIEIHQDHFALCLVE 76

Query: 73  ------KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDD 126
                          +  G D+  +   I +   +  + + +  +  P           +
Sbjct: 77  KLADAGLDYHWSWAYNHIGFDIYNEGVAILSRKPLTPREVLVSEVNDPRDYHTRKVLLAE 136

Query: 127 KISWIK------RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
                +        L +  +  + E   +               +         +   + 
Sbjct: 137 TEVEGQLLTIASCHLSWWDKGFQGEWAKLEEKLLKAESSLVLMGDFNNPVGQQGYQTILA 196

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
              +   +               + + WD           ++ID++  S      +  + 
Sbjct: 197 SPLKLQDSHAVAREAIGEATVEGIIAGWD------DNKHALKIDYVFTSQGMD--VERSA 248

Query: 241 IDTKPRGWTKPSDH 254
           +    +     SDH
Sbjct: 249 VVFDGKETPVVSDH 262


>gi|284033955|ref|YP_003383886.1| endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836]
 gi|283813248|gb|ADB35087.1| Endonuclease/exonuclease/phosphatase [Kribbella flavida DSM 17836]
          Length = 269

 Score = 38.6 bits (88), Expect = 0.89,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 18/43 (41%), Gaps = 7/43 (16%)

Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            RID+++ S +  +      I           DH PV+ + ++
Sbjct: 234 RRIDYVLHSTDFRAKSARTPITHAA-------DHLPVVATFEL 269


>gi|71894913|ref|NP_001026376.1| protein angel homolog 1 [Gallus gallus]
 gi|53133676|emb|CAG32167.1| hypothetical protein RCJMB04_19e20 [Gallus gallus]
          Length = 662

 Score = 38.6 bits (88), Expect = 0.89,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 24/64 (37%), Gaps = 7/64 (10%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTED----KNFPFETLQSLNYHIETCGQKSYNGVAILS 72
           R+ N+   I+  +PD++CLQE   ++    +     T   + +      +          
Sbjct: 283 RLPNILQEIQHWDPDVLCLQEV--QENHYREQLEP-TFVKMGFACFYKRRTGRKTDGCAV 339

Query: 73  KYQP 76
            Y+ 
Sbjct: 340 CYKQ 343


>gi|304404660|ref|ZP_07386321.1| Endonuclease/exonuclease/phosphatase [Paenibacillus curdlanolyticus
           YK9]
 gi|304346467|gb|EFM12300.1| Endonuclease/exonuclease/phosphatase [Paenibacillus curdlanolyticus
           YK9]
          Length = 313

 Score = 38.6 bits (88), Expect = 0.90,   Method: Composition-based stats.
 Identities = 28/253 (11%), Positives = 59/253 (23%), Gaps = 16/253 (6%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTE-DKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75
            I  + A I+   PD++ L E     ++    + L  L  H      +            
Sbjct: 63  AIAEIVARIRALAPDVVGLCEVFANGERKRIRDALSDLYPHFREGPDEGDLESDGGLLLL 122

Query: 76  PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135
               +             +           +R+     P         Y    +      
Sbjct: 123 SRHPLLAADAMIFRACDGWDCFANKG-VIHIRVQPASWP---IPLDIFYSHMQNIETDNG 178

Query: 136 RFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAI 195
                              +         +  I   +     ++    + +      D  
Sbjct: 179 VGTLYAQLTTMNNFIVTRRDPAGSQIIMGDLNIPGENQQHYAQLYDRLRLVDCWFLADNQ 238

Query: 196 RATHD----THHLYSFWDYYADSWSKNKGIRIDHIMLSP--EATSLLHSARIDTKPRGWT 249
             +       ++ Y+  D    S   N   R+D++++        +L    +        
Sbjct: 239 ATSGPTLVIENNFYANPDDRPSS---NH--RLDYVLMRGGIRLVPILADIEVLKFQHNGR 293

Query: 250 KPSDHTPVIVSLD 262
             SDH  V  S D
Sbjct: 294 FISDHFGVRASFD 306


>gi|237723968|ref|ZP_04554449.1| glycosyl hydrolase family 109 protein 5 [Bacteroides sp. D4]
 gi|229437632|gb|EEO47709.1| glycosyl hydrolase family 109 protein 5 [Bacteroides dorei
           5_1_36/D4]
          Length = 502

 Score = 38.6 bits (88), Expect = 0.90,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 31/104 (29%), Gaps = 9/104 (8%)

Query: 151 AGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWD- 209
             D  I        + +I EN      E+       Q +            H+L  FWD 
Sbjct: 159 CWDL-INLSEKTRKHCMILENCCYDWFEMNTLNMAQQGVFGEIIRAQGAYIHNLSPFWDH 217

Query: 210 YYADSWSKNKGIRIDH-------IMLSPEATSLLHSARIDTKPR 246
           Y+ +      G R+D+       +  +     +  +  I    R
Sbjct: 218 YWKNGKEDKLGWRLDYNMKHRGDVYATHGLGPVAQALDIHRGDR 261


>gi|212693871|ref|ZP_03301999.1| hypothetical protein BACDOR_03393 [Bacteroides dorei DSM 17855]
 gi|237708495|ref|ZP_04538976.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|212663403|gb|EEB23977.1| hypothetical protein BACDOR_03393 [Bacteroides dorei DSM 17855]
 gi|229457424|gb|EEO63145.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
          Length = 503

 Score = 38.6 bits (88), Expect = 0.90,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 31/104 (29%), Gaps = 9/104 (8%)

Query: 151 AGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWD- 209
             D  I        + +I EN      E+       Q +            H+L  FWD 
Sbjct: 159 CWDL-INLSEKTRKHCMILENCCYDWFEMNTLNMAQQGVFGEIIRAQGAYIHNLSPFWDH 217

Query: 210 YYADSWSKNKGIRIDH-------IMLSPEATSLLHSARIDTKPR 246
           Y+ +      G R+D+       +  +     +  +  I    R
Sbjct: 218 YWKNGKEDKLGWRLDYNMKHRGDVYATHGLGPVAQALDIHRGDR 261


>gi|308186127|ref|YP_003930258.1| hypothetical protein Pvag_0607 [Pantoea vagans C9-1]
 gi|308056637|gb|ADO08809.1| Uncharacterized protein ybhP [Pantoea vagans C9-1]
          Length = 253

 Score = 38.6 bits (88), Expect = 0.90,   Method: Composition-based stats.
 Identities = 31/260 (11%), Positives = 56/260 (21%), Gaps = 44/260 (16%)

Query: 15  RARIHNLAAWIKENNPDIICLQE---TKTEDKNFPFETLQSLNYHIETCGQKSYNGVAIL 71
           R  +  L   ++  + D++ LQE   T         E  +S +Y         +N  A  
Sbjct: 27  RFILPELREAVRATSADVVFLQEVMGTHAIHSLNHEEWPESPHYEFLADTM--WNDFAYG 84

Query: 72  SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ----TLRIGNLYLPHGNPITSTKYDDK 127
                 E               +     ++        L            +        
Sbjct: 85  RNAVYPEGHHGNAVLSRFPITDYENRDISVAGSENRGMLHCQIALPEPHGTLHVICVHLG 144

Query: 128 ISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQ 187
           +    R  +       +      A                          EV        
Sbjct: 145 LKEAHRHAQMKKICEMVNSLPPDAPVVVAGDFNDWQRRANAILKQGAGLKEVFSMKTGRP 204

Query: 188 NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK--- 244
              F                             +R+D I +         +A +      
Sbjct: 205 ARTFPARFPL-----------------------LRLDRIYV--------RNATVSHPWAL 233

Query: 245 PRG-WTKPSDHTPVIVSLDI 263
           PR  W+  SDH P+ V + +
Sbjct: 234 PRKPWSHLSDHAPLAVEIHL 253


>gi|294674138|ref|YP_003574754.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           ruminicola 23]
 gi|294472322|gb|ADE81711.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           ruminicola 23]
          Length = 311

 Score = 38.6 bits (88), Expect = 0.90,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 21/60 (35%), Gaps = 21/60 (35%)

Query: 223 IDHIMLSPEATSLLHSARIDT---------------------KPRGWTKPSDHTPVIVSL 261
           IDHI+ S    + + +A I                        PR     SDH P++V L
Sbjct: 250 IDHILGSSSINNKVDTAFIHAPKFLLEEDARYGGYRPRRTYIGPRYQGGFSDHLPLVVRL 309


>gi|126735134|ref|ZP_01750880.1| Endonuclease/exonuclease/phosphatase [Roseobacter sp. CCS2]
 gi|126715689|gb|EBA12554.1| Endonuclease/exonuclease/phosphatase [Roseobacter sp. CCS2]
          Length = 332

 Score = 38.6 bits (88), Expect = 0.90,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 21/53 (39%), Gaps = 12/53 (22%)

Query: 223 IDHIMLSPEATSLLH-----------SARIDTKPR-GWTKPSDHTPVIVSLDI 263
           +D++M+S                   +   D   R G    SDH PV++ +D+
Sbjct: 280 LDYVMVSQGLRQKAPIWQIWHPFDHPACYADVVLRDGLLAASDHFPVVLDIDL 332


>gi|7327281|gb|AAB26437.2| reverse transcriptase homolog [Chironomus thummi]
          Length = 883

 Score = 38.6 bits (88), Expect = 0.90,   Method: Composition-based stats.
 Identities = 8/30 (26%), Positives = 16/30 (53%)

Query: 9  WNVNSIRARIHNLAAWIKENNPDIICLQET 38
          WN N +  ++     ++ + N D+ C+ ET
Sbjct: 13 WNANGLTDKMLAFLDYLSKQNVDVACISET 42


>gi|319759037|gb|ADV70979.1| DNA nuclease [Streptococcus suis JS14]
          Length = 1039

 Score = 38.6 bits (88), Expect = 0.91,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 41/93 (44%), Gaps = 18/93 (19%)

Query: 192 TDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL-------LHSARIDTK 244
              + + HD    +S++ Y  ++ S      +D++++S             ++SA ++  
Sbjct: 867 MANLVSRHDASDRFSYF-YNGNNQS------LDNMLVSTNLLERYAFDMVHVNSAFMEEH 919

Query: 245 PRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQN 277
            R     SDH P++V LD+ + ++  Q   S  
Sbjct: 920 GR----ASDHDPLLVQLDVTKAQEPTQPEPSDK 948


>gi|281349076|gb|EFB24660.1| hypothetical protein PANDA_011327 [Ailuropoda melanoleuca]
          Length = 96

 Score = 38.6 bits (88), Expect = 0.91,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 25/79 (31%), Gaps = 10/79 (12%)

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
             E       L  M  T   R  H     Y+F+     ++S     RIDHI+    + + 
Sbjct: 3   NKETLSLNDTLDQMDLTHIYRTLHPKTTEYTFFSSVHGTFS-----RIDHILGHKTSLNK 57

Query: 236 LHSARIDTKPRGWTKPSDH 254
                I          SDH
Sbjct: 58  FRKIEIIPCI-----FSDH 71


>gi|281341662|gb|EFB17246.1| hypothetical protein PANDA_006643 [Ailuropoda melanoleuca]
          Length = 119

 Score = 38.6 bits (88), Expect = 0.91,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 24/67 (35%), Gaps = 10/67 (14%)

Query: 188 NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRG 247
            M  TD  RA H     Y+F+     ++S     RIDHI+    A +             
Sbjct: 30  QMDLTDIFRAFHPKAAEYTFFSSAHGTFS-----RIDHILGHKSALNKYKKIETIPCI-- 82

Query: 248 WTKPSDH 254
               SDH
Sbjct: 83  ---FSDH 86


>gi|253752620|ref|YP_003025761.1| surface-anchored DNA nuclease [Streptococcus suis SC84]
 gi|253754446|ref|YP_003027587.1| surface-anchored DNA nuclease [Streptococcus suis P1/7]
 gi|251816909|emb|CAZ52558.1| surface-anchored DNA nuclease [Streptococcus suis SC84]
 gi|251820692|emb|CAR47454.1| surface-anchored DNA nuclease [Streptococcus suis P1/7]
          Length = 1039

 Score = 38.6 bits (88), Expect = 0.91,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 41/93 (44%), Gaps = 18/93 (19%)

Query: 192 TDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL-------LHSARIDTK 244
              + + HD    +S++ Y  ++ S      +D++++S             ++SA ++  
Sbjct: 867 MANLVSRHDASDRFSYF-YNGNNQS------LDNMLVSTNLLERYAFDMVHVNSAFMEEH 919

Query: 245 PRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQN 277
            R     SDH P++V LD+ + ++  Q   S  
Sbjct: 920 GR----ASDHDPLLVQLDVTKAQEPTQPEPSDK 948


>gi|255594310|ref|XP_002536065.1| General secretion pathway protein E, putative [Ricinus communis]
 gi|223521009|gb|EEF26317.1| General secretion pathway protein E, putative [Ricinus communis]
          Length = 279

 Score = 38.6 bits (88), Expect = 0.91,   Method: Composition-based stats.
 Identities = 17/93 (18%), Positives = 35/93 (37%), Gaps = 16/93 (17%)

Query: 2   SVVTVATWN-------VNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLN 54
           S++   + N       +N IRA        I   +PDII + E + ++         ++ 
Sbjct: 62  SLMRQTSVNAANKVDFINGIRA--------ILRQDPDIILIGEVR-DESTAAMAVRAAMT 112

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDD 87
            H+      + +  A  S+ Q + +  H+    
Sbjct: 113 GHLVMTTLHTNSATAAFSRLQDLGVSPHMMAGC 145


>gi|147833918|emb|CAN72699.1| hypothetical protein VITISV_011568 [Vitis vinifera]
          Length = 1059

 Score = 38.6 bits (88), Expect = 0.91,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 1   MSVVTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTED 42
           +  + + + NV           + A IK  N D++ LQETK ++
Sbjct: 524 LMKLRILSLNVRGANDSDKRKVIKASIKAQNVDLVYLQETKMQE 567


>gi|146319622|ref|YP_001199334.1| DNA nuclease [Streptococcus suis 05ZYH33]
 gi|146321820|ref|YP_001201531.1| DNA nuclease [Streptococcus suis 98HAH33]
 gi|145690428|gb|ABP90934.1| DNA nuclease [Streptococcus suis 05ZYH33]
 gi|145692626|gb|ABP93131.1| DNA nuclease [Streptococcus suis 98HAH33]
 gi|292559239|gb|ADE32240.1| DNA nuclease [Streptococcus suis GZ1]
          Length = 1059

 Score = 38.6 bits (88), Expect = 0.91,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 41/93 (44%), Gaps = 18/93 (19%)

Query: 192 TDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL-------LHSARIDTK 244
              + + HD    +S++ Y  ++ S      +D++++S             ++SA ++  
Sbjct: 887 MANLVSRHDASDRFSYF-YNGNNQS------LDNMLVSTNLLERYAFDMVHVNSAFMEEH 939

Query: 245 PRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQN 277
            R     SDH P++V LD+ + ++  Q   S  
Sbjct: 940 GR----ASDHDPLLVQLDVTKAQEPTQPEPSDK 968


>gi|21553771|gb|AAM62864.1| unknown [Arabidopsis thaliana]
          Length = 426

 Score = 38.6 bits (88), Expect = 0.91,   Method: Composition-based stats.
 Identities = 38/288 (13%), Positives = 80/288 (27%), Gaps = 52/288 (18%)

Query: 4   VTVATWNVNS-----IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           + + ++NV       +  R+  +   I+ ++P +IC QE     +   ++  +  N+   
Sbjct: 158 LKILSYNVWFREDLELNLRMRAIGHLIQLHSPHLICFQEV--TPEI--YDIFRKSNWWKA 213

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
                S +       Y  +     +                +I  + L I  + +P   P
Sbjct: 214 YSCSVSVDVAVSRGYYCMLLSKLGVKSFSSKSFGN------SIMGRELSIAEVEVPGRKP 267

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
           +           +       S      +         +              N       
Sbjct: 268 L-----------VFATSHLESPCPGPPKWDQMFSRERVEQAKEAIEILRPNANVIFGGDM 316

Query: 179 VRQSF---QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI--RIDHIM------ 227
                   +      + D           +++        S N+ +  R+D I+      
Sbjct: 317 NWCDKLDGKFPLPDKWVDVWEVLKPGDLGFTYDTKANPMLSGNRALQKRLDRILCRLDDY 376

Query: 228 -------LSPEATSLLHSARIDTKPRGWTK-------PSDHTPVIVSL 261
                  +  EA   L   + + K RG  K       PSDH  ++V+L
Sbjct: 377 KLGGIEMVGKEAIPGLSYVK-EKKVRGDIKKLELPVLPSDHFGLLVTL 423


>gi|32472920|ref|NP_865914.1| hypothetical protein RB4127 [Rhodopirellula baltica SH 1]
 gi|32444157|emb|CAD73600.1| probable secreted protein [Rhodopirellula baltica SH 1]
          Length = 279

 Score = 38.6 bits (88), Expect = 0.92,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 20/46 (43%), Gaps = 4/46 (8%)

Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           N   +ID I+  P  +  L   ++  +       SDH P+   L++
Sbjct: 236 NPRRQIDFILFRPSNSWKLIEVKVLDEA----VASDHRPIFAVLEL 277


>gi|332040139|gb|EGI76521.1| hypothetical protein HGR_10877 [Hylemonella gracilis ATCC 19624]
          Length = 475

 Score = 38.6 bits (88), Expect = 0.93,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 20/55 (36%), Gaps = 15/55 (27%)

Query: 223 IDHIMLSPEATSLLHS-ARI---DTKPRGWTK-----------PSDHTPVIVSLD 262
           IDHI++S      L   + +       R               PSDH P  V+LD
Sbjct: 420 IDHILVSAALAQRLKKTSFVMSRYNYRRIGENTPMVVTPQDAVPSDHCPHFVALD 474


>gi|221134816|ref|ZP_03561119.1| endonuclease/exonuclease/phosphatase [Glaciecola sp. HTCC2999]
          Length = 321

 Score = 38.6 bits (88), Expect = 0.93,   Method: Composition-based stats.
 Identities = 31/282 (10%), Positives = 72/282 (25%), Gaps = 31/282 (10%)

Query: 2   SVVTVATWNV-------N-SIRAR----IHNLAAWIKENNPDIICLQETKTEDKNFPFET 49
           S +TVATWNV       N   + R    I+ +  ++   + D+  LQE     +      
Sbjct: 49  SQLTVATWNVEHLAYPINTGCKPRTESDINAMREYVNNVDADVFALQEV--ASEQAVRLL 106

Query: 50  LQSLNYHI------ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
             +  + +      ++   +        ++ +    V +    +       +        
Sbjct: 107 FPTDTWQVLMSPRPDSETYECRGSGRESTQQKIAYAVKNGININSVKGLSELGLNNPGLR 166

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
             L +          + +                        +       +    +  D 
Sbjct: 167 YGLELTIQSELGAIKLLNVHMKSGCFVDNYSRSDRESCQTFAQQAPILDAWVETQESEDI 226

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223
              ++ + +   +       ++L            + T  L     YY           I
Sbjct: 227 QYVLLGDFNHRLSAPYNHLTRQLMTNSDGSESTLYNTTGQLIGCHPYYPAP--------I 278

Query: 224 DHIML---SPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
           D + +   S       + A            SDH  V + ++
Sbjct: 279 DLVFVGGMSDNKYDYTYQAHTFNNMAPKAMLSDHCAVSLQIE 320


>gi|78048060|ref|YP_364235.1| endonuclease/exonuclease/phosphatase family protein [Xanthomonas
           campestris pv. vesicatoria str. 85-10]
 gi|325927483|ref|ZP_08188725.1| metal-dependent hydrolase [Xanthomonas perforans 91-118]
 gi|78036490|emb|CAJ24181.1| endonuclease/exonuclease/phosphatase family protein [Xanthomonas
           campestris pv. vesicatoria str. 85-10]
 gi|325542146|gb|EGD13646.1| metal-dependent hydrolase [Xanthomonas perforans 91-118]
          Length = 298

 Score = 38.6 bits (88), Expect = 0.94,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 7/63 (11%)

Query: 4   VTVATWNVNSIR----ARIHNLAAWIKENNPDIICLQET---KTEDKNFPFETLQSLNYH 56
           +T+ T N++  R    AR   +A  +K   PD+I LQE    +   +N      + L Y 
Sbjct: 43  MTLVTLNLHHDREDWPARRAYIARELKRLAPDVIALQEVIERRGSVENQAAWLARKLGYD 102

Query: 57  IET 59
              
Sbjct: 103 YTF 105


>gi|301095832|ref|XP_002897015.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262108444|gb|EEY66496.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 490

 Score = 38.6 bits (88), Expect = 0.94,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 7/39 (17%)

Query: 6   VATWNVNSIRAR-----IHNLAAWIKENNPDIICLQETK 39
           VA+WN+ +I  R     +  +A  +KE   DI+ LQE +
Sbjct: 193 VASWNIRNISRRKEIFLLERIADILKE--FDIVALQEVR 229


>gi|126342340|ref|XP_001373660.1| PREDICTED: similar to ocrl1 [Monodelphis domestica]
          Length = 864

 Score = 38.6 bits (88), Expect = 0.94,   Method: Composition-based stats.
 Identities = 49/292 (16%), Positives = 88/292 (30%), Gaps = 50/292 (17%)

Query: 6   VATWNVNSIRARIHNLAAWI--KENNPDIICL--QETKTEDKNF-------PFETL---- 50
           + TWNVN  ++    L  W+    + PDI CL  QE     + F         E L    
Sbjct: 209 IGTWNVNG-QSPDSALEPWLNCDTDPPDIYCLGFQELDLSTEAFFYFESTKEQEWLTSVD 267

Query: 51  QSLNYHIETCGQKSYNGVAIL-------------SKYQPIEIVTHLPGDDLDVQARFIEA 97
           ++L+Y  +    +    V ++                    + T L G   +  A  +  
Sbjct: 268 RALHYKCKYKKVQLVRLVGMMLLIFAKKDQCKYLHDVVTETVGTGLMGKMGNKGAVAVRF 327

Query: 98  TFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFL---RFASQRLELEEPLIFAGDY 154
            F   T  + + +    H         D K    +            +   + +I+ GD 
Sbjct: 328 LFHNTTFCI-VNSHLAAHVEDFERRNQDYKDICSRMTFSVPNQGHLNIMKHDVVIWLGDL 386

Query: 155 NIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY--SF-WDYY 211
           N         N +    +     ++ +  Q         A     +    +  ++ +D  
Sbjct: 387 NYRLC-MPDANEVKTLINRNELPKLLKLDQLNIQRSHKKAFADFTEGEIRFMPTYKFDPK 445

Query: 212 ADSWSKNKGIRIDHIMLSPEATSLL--HSARIDTKPRGW----TKPSDHTPV 257
            D W  +   R      +P     +      +  + R W     K SDH PV
Sbjct: 446 TDRWDSSGKCR------TPAWCDRILWRGTNV-NQQRYWSHMELKTSDHKPV 490


>gi|326680843|ref|XP_003201639.1| PREDICTED: hypothetical protein LOC100537186 [Danio rerio]
          Length = 1202

 Score = 38.6 bits (88), Expect = 0.95,   Method: Composition-based stats.
 Identities = 31/243 (12%), Positives = 68/243 (27%), Gaps = 14/243 (5%)

Query: 25  IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLP 84
           +   N DI  LQET+  D     E  +   ++ +           +    +   +    P
Sbjct: 25  LLRLNVDIAALQETRLADSGTLKE--KDYTFYWQGRAPDEPRQHGVAFAVKNNLLSMVEP 82

Query: 85  GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL 144
           G +   +   +    T    TL        +    T  K+   ++ +   +    Q + L
Sbjct: 83  GRNGTERLLTLRLNTTTGPLTLVSVYAPTLNATLETKDKFYGNLTSVINNIPDKEQLVLL 142

Query: 145 EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL 204
                F        +                  +         N+   ++   T   H +
Sbjct: 143 G---DFNARVGANHESWPSCLGKFGIGKMNENGQRLLELCAFHNLCIANSYFQTKPQHKV 199

Query: 205 YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
            S+    +  W +     +D I++   A + +               +DH+ V   + + 
Sbjct: 200 -SWRHPRSKHWHQ-----LDLILVRRSAINCVLHV---RSYHSADCDTDHSLVCCKIRLN 250

Query: 265 EPR 267
             R
Sbjct: 251 PKR 253


>gi|327300110|ref|XP_003234748.1| endonuclease/exonuclease/phosphatase [Trichophyton rubrum CBS
           118892]
 gi|326463642|gb|EGD89095.1| endonuclease/exonuclease/phosphatase [Trichophyton rubrum CBS
           118892]
          Length = 322

 Score = 38.6 bits (88), Expect = 0.95,   Method: Composition-based stats.
 Identities = 36/290 (12%), Positives = 81/290 (27%), Gaps = 41/290 (14%)

Query: 3   VVTVATWNVN-------------SIRARIHNLAAWIK---ENNPD-IICLQE-TKTEDKN 44
           +  + T N+              SIRA   ++   +      NP+  +CLQE    +  +
Sbjct: 39  LFRILTHNIRYATTSPSAGEQPWSIRA--PHIVNELDYHSRLNPESFVCLQEALHNQVTD 96

Query: 45  F-------PFETLQSLNYH-IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIE 96
                   P        Y+ +     K     + +     +  +       L        
Sbjct: 97  VLAGLNARPHAQADEWAYYGVGRDDGKQAGEYSPIFYRPAVWTLQERETVWLSETPSVPS 156

Query: 97  ATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI 156
             +   +  +    ++    +  T    +  +       R  S +L L     +    + 
Sbjct: 157 KGWDAASIRIVTIGVFNHKASNTTVLAMNTHLDDQGSKSRLESAKLILSLIQKYLAR-HP 215

Query: 157 IPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS 216
             + +                E  +    + +          +     ++ +D       
Sbjct: 216 EVKGNFLAGDFNSIESQEAYREFTKPGSSIVDTYKKVPAAQHYGDEITFTGFD------G 269

Query: 217 KNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP------SDHTPVIVS 260
           K KG RID++M+ P++ S      ++       +       SDH  V+  
Sbjct: 270 KTKGSRIDYVMVGPQSASASIPFTVNGYAVVPNRFDNRIYNSDHRAVVAD 319


>gi|305667498|ref|YP_003863785.1| hypothetical protein FB2170_14663 [Maribacter sp. HTCC2170]
 gi|88709546|gb|EAR01779.1| hypothetical protein FB2170_14663 [Maribacter sp. HTCC2170]
          Length = 602

 Score = 38.6 bits (88), Expect = 0.95,   Method: Composition-based stats.
 Identities = 31/234 (13%), Positives = 57/234 (24%), Gaps = 28/234 (11%)

Query: 9   WNV-----------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57
           WN+           +   +R+  +   IKE N D+I +QET   + +F       L Y+ 
Sbjct: 376 WNIWHGGIHWSMDKDGWDSRM-RIVEIIKEKNLDVILMQETY-SNGDF---IAAELGYYF 430

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
            T     Y              +T L   +               TQ +   + +    N
Sbjct: 431 ATTSDWDYKYQGANISVISRYPITELQVSEETEFNNVAVKLKISETQEIWAMSNWYGMSN 490

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGD---YNIIPQPHDCYNPIIWENDAC 174
                 Y+         +           P    G+      +              D  
Sbjct: 491 FNKVFDYNKSRFDNSDSIPVFFGGDFNAVPHEDGGENLASEKMLVEGFTDAYRSLYPDVE 550

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIML 228
                        +  +       + +  + S W     S         DH ++
Sbjct: 551 KHPGFTHQSDVRIDQLYYKGRGLMNTSTKVISTWPSGFPS---------DHFLI 595


>gi|88854827|ref|ZP_01129493.1| probable 5'-nucleotidase precursor [marine actinobacterium
           PHSC20C1]
 gi|88815988|gb|EAR25844.1| probable 5'-nucleotidase precursor [marine actinobacterium
           PHSC20C1]
          Length = 1422

 Score = 38.6 bits (88), Expect = 0.96,   Method: Composition-based stats.
 Identities = 14/74 (18%), Positives = 27/74 (36%), Gaps = 23/74 (31%)

Query: 202 HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT------KPRGWT------ 249
              Y++      ++    G  +DHI++SP     +  A +          RG+       
Sbjct: 546 DGQYTY------TFDGELGS-LDHIIVSPSLADKVTDAAVWNINSPEWGDRGYAFGATEA 598

Query: 250 ----KPSDHTPVIV 259
               + SDH P+ +
Sbjct: 599 GTVFRSSDHDPISI 612


>gi|322802816|gb|EFZ23015.1| hypothetical protein SINV_01767 [Solenopsis invicta]
          Length = 109

 Score = 38.6 bits (88), Expect = 0.97,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 23/59 (38%), Gaps = 8/59 (13%)

Query: 209 DYYADSWSKNKGIR---IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
           +Y   +     G R   ID I  +           I+ +    T  SDH PV +++D+ 
Sbjct: 12  NYDTKTRLNYYGQRASNIDLIFANNNLARR-----INYQQLSNTWGSDHFPVEINVDVS 65


>gi|160884084|ref|ZP_02065087.1| hypothetical protein BACOVA_02060 [Bacteroides ovatus ATCC 8483]
 gi|156110426|gb|EDO12171.1| hypothetical protein BACOVA_02060 [Bacteroides ovatus ATCC 8483]
          Length = 611

 Score = 38.6 bits (88), Expect = 0.97,   Method: Composition-based stats.
 Identities = 31/278 (11%), Positives = 77/278 (27%), Gaps = 58/278 (20%)

Query: 3   VVTVATWNV---NSIRARIH------NLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
            + + T+N+   N     +        +A  I   +PD++ +Q                 
Sbjct: 25  TLRLMTYNIKNANG----MDDICSFQRVANVINNASPDVVAIQ----------------- 63

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
              +++  ++S     +    +  ++             ++           LR+  + L
Sbjct: 64  --EVDSMTRRSGQKYVLGEIAERTQMHACFAPAIEFEGGKYGIG-LLTKQVPLRLQTIPL 120

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
           P      +    +   +I      +    +  + L          +        +     
Sbjct: 121 PGREEARTLILAEFEDYIYCCTHLSLTEGDRMKSLEIVKSLIASYKKPLFLAGDMNAEPE 180

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
              ++  Q   ++ +        A                         ID+I +S +  
Sbjct: 181 SDFIKELQKDFQILSNPEKHTYPAPDPKEA-------------------IDYIAVSKQNA 221

Query: 234 S--LLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKK 269
           +   + SA++  +       SDH P++V L   E   K
Sbjct: 222 TGFAVISAKVVNELM----ASDHRPILVELRTAEKADK 255


>gi|147865625|emb|CAN80960.1| hypothetical protein VITISV_014609 [Vitis vinifera]
          Length = 753

 Score = 38.6 bits (88), Expect = 0.97,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 38/126 (30%), Gaps = 3/126 (2%)

Query: 18  IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH-IETCGQKSYNGVAILSKYQP 76
              + A IK+N  D++CLQETK ++       ++SL        G     G         
Sbjct: 265 RKVIKALIKKNRVDLVCLQETKIQE--MSRGLIRSLGVERFLEWGTVDSRGTTGGIVVIW 322

Query: 77  IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
              V  L   +    +         +  T     +Y P         +++  +    +  
Sbjct: 323 DNRVFELIELEKGEHSISCHFKNCEDGFTWTFTGVYGPTMRRDRDCFWNELETIYGLWNG 382

Query: 137 FASQRL 142
                +
Sbjct: 383 PWVDYM 388


>gi|332022124|gb|EGI62446.1| Inositol polyphosphate 5-phosphatase K [Acromyrmex echinatior]
          Length = 436

 Score = 38.6 bits (88), Expect = 0.98,   Method: Composition-based stats.
 Identities = 38/318 (11%), Positives = 83/318 (26%), Gaps = 70/318 (22%)

Query: 4   VTV--ATWNVN--------------SIRARIHNLAAWIKENNPD--IICLQETKTEDKNF 45
           + +   T+NV                I +   +   W     PD   + LQE K++ +N 
Sbjct: 8   LRIYFITYNVATKFPDPREDLHQLLGITSCDKSKLVW-----PDLYFVGLQEVKSQPQNL 62

Query: 46  PFE--TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDL--------------- 88
             +    +           K Y+ V + S+     ++                       
Sbjct: 63  ILDYILFEDPWTKAFRDVLKKYDYVKVRSQRLQGLVLNVFCLRKHLTHLRLIETQYTKTG 122

Query: 89  ----DVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL 144
                     +         ++ + N +L   + + + +  D  + +      A     +
Sbjct: 123 FGGIWGNKGAVSIRMNTYGVSICVVNTHLTPHDHLLADRVSDYNTIVTDHTFTAPFTSRI 182

Query: 145 EEPLIFAG----DYNIIPQPHDCYNPIIWENDAC-----FTLEVRQSFQKLQNMGFTDAI 195
                       ++ +  +     +  +              ++    ++ Q     +  
Sbjct: 183 LYHDYIFWIGDLNFRLNGEELTAADIDLLVKKKQLKELLERDQLMMVMKEQQAFAELNES 242

Query: 196 RATHDTHHLYSFWDY-----YADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
             T    + Y F           SW+       D I+    A  +     I T+   +  
Sbjct: 243 SITFPPTYKYEFESQEFDLKRRPSWT-------DRILYKVNAADIYDDIEIHTEQHTYKS 295

Query: 251 P-----SDHTPVIVSLDI 263
                 SDH PV    DI
Sbjct: 296 HPDYSVSDHKPVTGEFDI 313


>gi|307219280|gb|ADN39445.1| RT09974p [Drosophila melanogaster]
          Length = 1292

 Score = 38.6 bits (88), Expect = 0.98,   Method: Composition-based stats.
 Identities = 12/160 (7%), Positives = 37/160 (23%), Gaps = 2/160 (1%)

Query: 34  CLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR 93
           CL E K ++     + ++S     +      +    I           +           
Sbjct: 801 CLGEIKCQNNATCIDGVESYKCECQPGFSGEFCDTKIQFCSPEFNPCANGAKCMDHFTHY 860

Query: 94  FIEATFTINTQTLR--IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFA 151
             +     +       I +          +          +    +  +  E    +   
Sbjct: 861 SCDCQAGFHGTNCTDNIDDCQNHMCQNGGTCVDGINDYQCRCPDDYTGKYCEGHNMISMM 920

Query: 152 GDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191
                  Q H+C + + ++ +A  +  + +          
Sbjct: 921 YPQTSPCQNHECKHGVCFQPNAQGSDYLCRCHPGYTGKWC 960


>gi|147816091|emb|CAN72890.1| hypothetical protein VITISV_022310 [Vitis vinifera]
          Length = 1356

 Score = 38.6 bits (88), Expect = 0.98,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 22/60 (36%), Gaps = 9/60 (15%)

Query: 201 THHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
               +++     +    N+   R+D  ++SP              PR     SDH P+++
Sbjct: 231 QGGDFTW-----NGGLNNQTWARLDRFLVSPSWIDQFSGINQCRLPR---PVSDHFPIML 282


>gi|308274459|emb|CBX31058.1| unknown protein [uncultured Desulfobacterium sp.]
          Length = 73

 Score = 38.6 bits (88), Expect = 0.99,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 17/40 (42%)

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           D I +S        +  ID + +     SDH P  + +D+
Sbjct: 34  DQIWVSQALAGRFANPTIDRRTKHKGDGSDHDPAWIDIDL 73


>gi|293368736|ref|ZP_06615341.1| Ser/Thr phosphatase family protein [Bacteroides ovatus SD CMC 3f]
 gi|298480109|ref|ZP_06998308.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. D22]
 gi|292636201|gb|EFF54688.1| Ser/Thr phosphatase family protein [Bacteroides ovatus SD CMC 3f]
 gi|298273918|gb|EFI15480.1| endonuclease/exonuclease/phosphatase family protein [Bacteroides
           sp. D22]
          Length = 611

 Score = 38.6 bits (88), Expect = 0.99,   Method: Composition-based stats.
 Identities = 31/278 (11%), Positives = 77/278 (27%), Gaps = 58/278 (20%)

Query: 3   VVTVATWNV---NSIRARIH------NLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
            + + T+N+   N     +        +A  I   +PD++ +Q                 
Sbjct: 25  TLRLMTYNIKNANG----MDDICSFQRVANVINNASPDVVAIQ----------------- 63

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
              +++  ++S     +    +  ++             ++           LR+  + L
Sbjct: 64  --EVDSMTRRSGQKYVLGEIAERTQMHACFAPAIEFEGGKYGIG-LLTKQVPLRLQTIPL 120

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
           P      +    +   +I      +    +  + L          +        +     
Sbjct: 121 PGREEARTLILAEFEDYIYCCTHLSLTEGDRMKSLEIVKSLIASYKKPLFLAGDMNAEPE 180

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
              ++  Q   ++ +        A                         ID+I +S +  
Sbjct: 181 SDFIKELQKDFQILSNPEKHTYPAPDPKEA-------------------IDYIAVSKQNA 221

Query: 234 S--LLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKK 269
           +   + SA++  +       SDH P++V L   E   K
Sbjct: 222 TGFAVISAKVVNELM----ASDHRPILVELRTAEKADK 255


>gi|294812176|ref|ZP_06770819.1| Endonuclease/exonuclease/phosphatase [Streptomyces clavuligerus
          ATCC 27064]
 gi|326440668|ref|ZP_08215402.1| hypothetical protein SclaA2_06358 [Streptomyces clavuligerus ATCC
          27064]
 gi|294324775|gb|EFG06418.1| Endonuclease/exonuclease/phosphatase [Streptomyces clavuligerus
          ATCC 27064]
          Length = 251

 Score = 38.6 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 20/35 (57%)

Query: 3  VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQE 37
          VV V ++NV S+R     L   ++   PD++ +QE
Sbjct: 18 VVRVLSYNVRSLRDDEDALIRVVRAAAPDLVLVQE 52


>gi|242381487|emb|CAY39203.1| hypothetical protein [Streptomyces clavuligerus]
          Length = 237

 Score = 38.6 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 20/35 (57%)

Query: 3  VVTVATWNVNSIRARIHNLAAWIKENNPDIICLQE 37
          VV V ++NV S+R     L   ++   PD++ +QE
Sbjct: 18 VVRVLSYNVRSLRDDEDALIRVVRAAAPDLVLVQE 52


>gi|242082908|ref|XP_002441879.1| hypothetical protein SORBIDRAFT_08g004125 [Sorghum bicolor]
 gi|241942572|gb|EES15717.1| hypothetical protein SORBIDRAFT_08g004125 [Sorghum bicolor]
          Length = 605

 Score = 38.6 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 30/71 (42%), Gaps = 13/71 (18%)

Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL--HSARIDTKPRGWTKPSDHTPVI 258
               Y++    ++        +ID +  S   T      SA I         PSDH P++
Sbjct: 95  QGRKYTW----SNMQPSPLLQKIDWVFTSNAWTLKYPDTSATILD-----RTPSDHCPLL 145

Query: 259 VSL--DIPEPR 267
           V++  +IP+P+
Sbjct: 146 VTISTNIPKPK 156


>gi|240141286|ref|YP_002965766.1| hypothetical protein MexAM1_META1p4880 [Methylobacterium
          extorquens AM1]
 gi|240011263|gb|ACS42489.1| conserved hypothetical protein [Methylobacterium extorquens AM1]
          Length = 239

 Score = 38.6 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 6/37 (16%)

Query: 7  ATWNVNSIR---ARIHNLAAWIKENNPDIICLQE-TK 39
           +WN+  +R   A +  L A I++  PD + +QE TK
Sbjct: 1  MSWNL--LRRTGAAVDCLVALIEQERPDFLLMQEATK 35


>gi|224023659|ref|ZP_03642025.1| hypothetical protein BACCOPRO_00371 [Bacteroides coprophilus DSM
          18228]
 gi|224016881|gb|EEF74893.1| hypothetical protein BACCOPRO_00371 [Bacteroides coprophilus DSM
          18228]
          Length = 637

 Score = 38.6 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 7/42 (16%), Positives = 19/42 (45%), Gaps = 5/42 (11%)

Query: 2  SVVTVATWNVN---SI--RARIHNLAAWIKENNPDIICLQET 38
          + + + ++N+     +  +     +A   +E   D++ LQE 
Sbjct: 37 NDLKIISYNIRHGEGLDGKTDYVRIARMFREQQADVVALQEV 78


>gi|147798829|emb|CAN61071.1| hypothetical protein VITISV_006592 [Vitis vinifera]
          Length = 1198

 Score = 38.6 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 9/59 (15%), Positives = 22/59 (37%), Gaps = 7/59 (11%)

Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
              ++S+    +   +     R+D  +++     L        + R     SDH P+++
Sbjct: 918 QRGVFSW----SGGRNNQSWARLDRFLVTQSWLDLFRGVV---QSRLPRPTSDHFPILL 969


>gi|311977773|ref|YP_003986893.1| hypothetical protein MIMI_gp0419 [Acanthamoeba polyphaga mimivirus]
 gi|82000306|sp|Q5UQW5|YL388_MIMIV RecName: Full=Uncharacterized protein L388
 gi|55417007|gb|AAV50657.1| unknown [Acanthamoeba polyphaga mimivirus]
 gi|308204374|gb|ADO18175.1| putative endonuclease/exonuclease/phosphatase [Acanthamoeba
           polyphaga mimivirus]
          Length = 268

 Score = 38.6 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 35/255 (13%), Positives = 73/255 (28%), Gaps = 20/255 (7%)

Query: 17  RIHNLAAWIKENNPDIICLQET-KTED----KNFPFETLQSLNYHIETCGQKSYNGVAIL 71
           R   +   I+  NPDII  QE  K ++    + F  E L + +Y I+      +   A++
Sbjct: 25  RRDLIINLIEAENPDIILFQECNKLQNTEDMEKF-MEDLPNYDYVIKYSLPGVFRSRALI 83

Query: 72  SKYQPIEIVTHLPGDDLDVQAR----FIEATFTINTQTLRIGNLYLPHGNPITSTKYDDK 127
             Y P +++ +                       +   + +G  +L   +      ++  
Sbjct: 84  IAYNPNKLIKNSEIVKWFSDTPDVPSIGWGNPDDDFGRIILGCEFLEKNSDKKFWIFNVH 143

Query: 128 ISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQ 187
                  +R +   L          D  II       +  +  +                
Sbjct: 144 FDIDVESIRKSILLLPELIDKQCLSDSKIILAGDFNTDDKLLFDTLKNNNFD-------- 195

Query: 188 NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRG 247
               +     T       SF     +     + + +DH+         ++          
Sbjct: 196 --RLSQTFNTTDKVKLNVSFVGKRDNFGKLTEDLYLDHVFGREVYNYNIYCPFEYDFIIN 253

Query: 248 WTKPSDHTPVIVSLD 262
               SDH PV++  +
Sbjct: 254 KYIVSDHLPVVIIFE 268


>gi|254523952|ref|ZP_05136007.1| endonuclease/exonuclease/phosphatase [Stenotrophomonas sp. SKA14]
 gi|219721543|gb|EED40068.1| endonuclease/exonuclease/phosphatase [Stenotrophomonas sp. SKA14]
          Length = 245

 Score = 38.6 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 15/96 (15%), Positives = 31/96 (32%), Gaps = 14/96 (14%)

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
             +A    +     ++ +        R       + +F  +  D         IDHI++S
Sbjct: 160 HPNAVLMGDFNCLAERPEMQVLYQKTRLQPPGCIVPTFPSWRPD-------RAIDHILVS 212

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
               +    A            SDH  + +++D+P 
Sbjct: 213 SGLQTRTVEAV-------PAAFSDHLALAMAIDVPA 241


>gi|194367178|ref|YP_002029788.1| endonuclease/exonuclease/phosphatase [Stenotrophomonas maltophilia
           R551-3]
 gi|194349982|gb|ACF53105.1| Endonuclease/exonuclease/phosphatase [Stenotrophomonas maltophilia
           R551-3]
          Length = 245

 Score = 38.6 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 15/96 (15%), Positives = 31/96 (32%), Gaps = 14/96 (14%)

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
             +A    +     ++ +        R       + +F  +  D         IDHI++S
Sbjct: 160 HPNAVLMGDFNCLAERPEMQVLYQKTRLQPPGCIVPTFPSWRPD-------RAIDHILVS 212

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
               +    A            SDH  + +++D+P 
Sbjct: 213 SGLQTRTVEAV-------PAAFSDHLALAMAIDVPA 241


>gi|95928596|ref|ZP_01311343.1| Endonuclease/exonuclease/phosphatase [Desulfuromonas acetoxidans
          DSM 684]
 gi|95135386|gb|EAT17038.1| Endonuclease/exonuclease/phosphatase [Desulfuromonas acetoxidans
          DSM 684]
          Length = 230

 Score = 38.6 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 20/41 (48%), Gaps = 7/41 (17%)

Query: 4  VTVATWNV------NSIRARIHNLAAWIKENNPDIICLQET 38
          + +ATWN+      +  R  +  +   I++   D+I LQE 
Sbjct: 6  LRLATWNIHMAVGSDGQRD-LSRIIKVIRQLRADVIGLQEV 45


>gi|308193419|gb|ADO16251.1| RT09980p [Drosophila melanogaster]
          Length = 1468

 Score = 38.6 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 12/160 (7%), Positives = 37/160 (23%), Gaps = 2/160 (1%)

Query: 34   CLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR 93
            CL E K ++     + ++S     +      +    I           +           
Sbjct: 977  CLGEIKCQNNATCIDGVESYKCECQPGFSGEFCDTKIQFCSPEFNPCANGAKCMDHFTHY 1036

Query: 94   FIEATFTINTQTLR--IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFA 151
              +     +       I +          +          +    +  +  E    +   
Sbjct: 1037 SCDCQAGFHGTNCTDNIDDCQNHMCQNGGTCVDGINDYQCRCPDDYTGKYCEGHNMISMM 1096

Query: 152  GDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191
                   Q H+C + + ++ +A  +  + +          
Sbjct: 1097 YPQTSPCQNHECKHGVCFQPNAQGSDYLCRCHPGYTGKWC 1136


>gi|289671214|ref|ZP_06492289.1| endonuclease/exonuclease/phosphatase family protein [Xanthomonas
           campestris pv. musacearum NCPPB4381]
          Length = 303

 Score = 38.6 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 7/63 (11%)

Query: 4   VTVATWNVNSIR----ARIHNLAAWIKENNPDIICLQET---KTEDKNFPFETLQSLNYH 56
           +T+ T N++  R    AR   +A  +K+  PD+I LQE    +   +N      + L Y 
Sbjct: 48  MTLVTLNLHHDREDWPARRAYIAKELKQLAPDVIALQEVIERRGSVENQAAWLARKLGYD 107

Query: 57  IET 59
              
Sbjct: 108 YTF 110


>gi|289665777|ref|ZP_06487358.1| endonuclease/exonuclease/phosphatase family protein [Xanthomonas
           campestris pv. vasculorum NCPPB702]
          Length = 303

 Score = 38.6 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 7/63 (11%)

Query: 4   VTVATWNVNSIR----ARIHNLAAWIKENNPDIICLQET---KTEDKNFPFETLQSLNYH 56
           +T+ T N++  R    AR   +A  +K+  PD+I LQE    +   +N      + L Y 
Sbjct: 48  MTLVTLNLHHDREDWPARRAYIAKELKQLAPDVIALQEVIERRGSVENQAAWLARKLGYD 107

Query: 57  IET 59
              
Sbjct: 108 YTF 110


>gi|324096448|gb|ADY17753.1| RT11125p [Drosophila melanogaster]
          Length = 1468

 Score = 38.6 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 12/160 (7%), Positives = 37/160 (23%), Gaps = 2/160 (1%)

Query: 34   CLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR 93
            CL E K ++     + ++S     +      +    I           +           
Sbjct: 977  CLGEIKCQNNATCIDGVESYKCECQPGFSGEFCDTKIQFCSPEFNPCANGAKCMDHFTHY 1036

Query: 94   FIEATFTINTQTLR--IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFA 151
              +     +       I +          +          +    +  +  E    +   
Sbjct: 1037 SCDCQAGFHGTNCTDNIDDCQNHMCQNGGTCVDGINDYQCRCPDDYTGKYCEGHNMISMM 1096

Query: 152  GDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191
                   Q H+C + + ++ +A  +  + +          
Sbjct: 1097 YPQTSPCQNHECKHGVCFQPNAQGSDYLCRCHPGYTGKWC 1136


>gi|308818232|gb|ADO51076.1| RT09973p [Drosophila melanogaster]
          Length = 1474

 Score = 38.6 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 12/160 (7%), Positives = 37/160 (23%), Gaps = 2/160 (1%)

Query: 34   CLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR 93
            CL E K ++     + ++S     +      +    I           +           
Sbjct: 980  CLGEIKCQNNATCIDGVESYKCECQPGFSGEFCDTKIQFCSPEFNPCANGAKCMDHFTHY 1039

Query: 94   FIEATFTINTQTLR--IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFA 151
              +     +       I +          +          +    +  +  E    +   
Sbjct: 1040 SCDCQAGFHGTNCTDNIDDCQNHMCQNGGTCVDGINDYQCRCPDDYTGKYCEGHNMISMM 1099

Query: 152  GDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191
                   Q H+C + + ++ +A  +  + +          
Sbjct: 1100 YPQTSPCQNHECKHGVCFQPNAQGSDYLCRCHPGYTGKWC 1139


>gi|253756379|ref|YP_003029519.1| surface-anchored DNA nuclease [Streptococcus suis BM407]
 gi|251818843|emb|CAZ56686.1| surface-anchored DNA nuclease [Streptococcus suis BM407]
          Length = 1039

 Score = 38.6 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 41/93 (44%), Gaps = 18/93 (19%)

Query: 192 TDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL-------LHSARIDTK 244
              + + HD    +S++ Y  ++ S      +D++++S             ++SA ++  
Sbjct: 867 MANLVSRHDASDRFSYF-YNGNNQS------LDNMLVSTNLFERYAFDMVHVNSAFMEEH 919

Query: 245 PRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQN 277
            R     SDH P++V LD+ + ++  Q   S  
Sbjct: 920 GR----ASDHDPLLVQLDVTKAQEPTQPEPSDK 948


>gi|195583744|ref|XP_002081676.1| GD25590 [Drosophila simulans]
 gi|194193685|gb|EDX07261.1| GD25590 [Drosophila simulans]
          Length = 1506

 Score = 38.6 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 12/160 (7%), Positives = 37/160 (23%), Gaps = 2/160 (1%)

Query: 34   CLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR 93
            CL E K ++     + ++S     +      +    I           +           
Sbjct: 1015 CLGEIKCQNNATCIDGVESYKCECQPGFSGEFCDTKIQFCSPEFNPCANGAKCMDHFTHY 1074

Query: 94   FIEATFTINTQTLR--IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFA 151
              +     +       I +          +          +    +  +  E    +   
Sbjct: 1075 SCDCQAGFHGTNCTDNIDDCQNHMCQNGGTCVDGINDYQCRCPDDYTGKYCEGHNMISMM 1134

Query: 152  GDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191
                   Q H+C + + ++ +A  +  + +          
Sbjct: 1135 YPQTSPCQNHECKHGVCFQPNAQGSDYLCRCHPGYTGKWC 1174


>gi|195488431|ref|XP_002092313.1| GE14122 [Drosophila yakuba]
 gi|194178414|gb|EDW92025.1| GE14122 [Drosophila yakuba]
          Length = 1507

 Score = 38.6 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 12/160 (7%), Positives = 37/160 (23%), Gaps = 2/160 (1%)

Query: 34   CLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR 93
            CL E K ++     + ++S     +      +    I           +           
Sbjct: 1016 CLGEIKCQNNATCIDGVESYKCECQPGFSGEFCDTKIQFCSPEFNPCANGAKCMDHFTHY 1075

Query: 94   FIEATFTINTQTLR--IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFA 151
              +     +       I +          +          +    +  +  E    +   
Sbjct: 1076 SCDCQAGFHGTNCTDNIDDCQNHMCQNGGTCVDGINDYQCRCPDDYTGKYCEGHNMISMM 1135

Query: 152  GDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191
                   Q H+C + + ++ +A  +  + +          
Sbjct: 1136 YPQTSPCQNHECKHGVCFQPNAQGSDYLCRCHPGYTGKWC 1175


>gi|195334727|ref|XP_002034028.1| GM20113 [Drosophila sechellia]
 gi|194125998|gb|EDW48041.1| GM20113 [Drosophila sechellia]
          Length = 1506

 Score = 38.6 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 12/160 (7%), Positives = 37/160 (23%), Gaps = 2/160 (1%)

Query: 34   CLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR 93
            CL E K ++     + ++S     +      +    I           +           
Sbjct: 1015 CLGEIKCQNNATCIDGVESYKCECQPGFSGEFCDTKIQFCSPEFNPCANGAKCMDHFTHY 1074

Query: 94   FIEATFTINTQTLR--IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFA 151
              +     +       I +          +          +    +  +  E    +   
Sbjct: 1075 SCDCQAGFHGTNCTDNIDDCQNHMCQNGGTCVDGINDYQCRCPDDYTGKYCEGHNMISMM 1134

Query: 152  GDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191
                   Q H+C + + ++ +A  +  + +          
Sbjct: 1135 YPQTSPCQNHECKHGVCFQPNAQGSDYLCRCHPGYTGKWC 1174


>gi|147858612|emb|CAN78865.1| hypothetical protein VITISV_013346 [Vitis vinifera]
          Length = 2935

 Score = 38.6 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 8/27 (29%), Positives = 16/27 (59%)

Query: 13  SIRARIHNLAAWIKENNPDIICLQETK 39
             R +   +  +++  NPD++ +QETK
Sbjct: 708 GSRNKRRMVKDFLRSENPDVVMIQETK 734


>gi|17136480|ref|NP_476727.1| slit, isoform C [Drosophila melanogaster]
 gi|161077132|ref|NP_001097334.1| slit, isoform E [Drosophila melanogaster]
 gi|33302576|sp|P24014|SLIT_DROME RecName: Full=Protein slit; Short=dSlit; Contains: RecName:
            Full=Protein slit N-product; Contains: RecName:
            Full=Protein slit C-product; Flags: Precursor
 gi|7303028|gb|AAF58097.1| slit, isoform C [Drosophila melanogaster]
 gi|157400354|gb|ABV53817.1| slit, isoform E [Drosophila melanogaster]
          Length = 1504

 Score = 38.6 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 12/160 (7%), Positives = 37/160 (23%), Gaps = 2/160 (1%)

Query: 34   CLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR 93
            CL E K ++     + ++S     +      +    I           +           
Sbjct: 1013 CLGEIKCQNNATCIDGVESYKCECQPGFSGEFCDTKIQFCSPEFNPCANGAKCMDHFTHY 1072

Query: 94   FIEATFTINTQTLR--IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFA 151
              +     +       I +          +          +    +  +  E    +   
Sbjct: 1073 SCDCQAGFHGTNCTDNIDDCQNHMCQNGGTCVDGINDYQCRCPDDYTGKYCEGHNMISMM 1132

Query: 152  GDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191
                   Q H+C + + ++ +A  +  + +          
Sbjct: 1133 YPQTSPCQNHECKHGVCFQPNAQGSDYLCRCHPGYTGKWC 1172


>gi|90022590|ref|YP_528417.1| metal-dependent hydrolase-like protein [Saccharophagus degradans
           2-40]
 gi|89952190|gb|ABD82205.1| Endonuclease/exonuclease/phosphatase [Saccharophagus degradans
           2-40]
          Length = 261

 Score = 38.6 bits (88), Expect = 1.0,   Method: Composition-based stats.
 Identities = 37/272 (13%), Positives = 75/272 (27%), Gaps = 59/272 (21%)

Query: 5   TVATWNVNSIRA-------------RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQ 51
           TV ++N   IR              R +N+   I + NP +I LQE  T  + +  E L 
Sbjct: 36  TVMSFN---IRTEHANDPGELAWEKRKNNVVDVIVKANPSVIGLQEASTNQQQYIEEALG 92

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
             N+         +         +    +     +        ++A  T  +      + 
Sbjct: 93  P-NWLPVANAPILFRSDMYRLLAKGAIELVEDKWEKRFAYWVKLKAKNTNTSWLFITTHW 151

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
            +   + + S                 +     + P++  GD+N  P             
Sbjct: 152 GVDEASQLGS--------AEILLNALPAVIKNWQLPVVLVGDFNAEPNSEPY-------- 195

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
                                  ++  + +    +FW      +      +ID+   +  
Sbjct: 196 -----------------------LKMVNGSPLQNNFWGLTFTGFKSKAIAQIDYAWAAGL 232

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             +   +   D      T  SDH P+I    +
Sbjct: 233 TINKCKA---DRFDAYATPASDHYPIICEFKL 261


>gi|312218131|emb|CBX98077.1| similar to glucose-repressible alcohol dehydrogenase
           transcriptional effector [Leptosphaeria maculans]
          Length = 760

 Score = 38.6 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 3/58 (5%)

Query: 16  ARIHNLAAWIKENNPDIICLQETKTEDK--NFPFETLQSLNYHIETCGQKSYNGVAIL 71
           +R   + A ++E N DI+CLQE   +D    F  E L   +Y      +     +A  
Sbjct: 412 SRRELILAELRERNADIVCLQEID-QDSFNEFFREALAHNDYKGVFWPKSRARTMAER 468


>gi|310823846|ref|YP_003956204.1| hypothetical protein STAUR_6620 [Stigmatella aurantiaca DW4/3-1]
 gi|309396918|gb|ADO74377.1| uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
          Length = 397

 Score = 38.6 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 19/39 (48%), Gaps = 7/39 (17%)

Query: 4  VTVATWNVNSIR----ARIHNLAAWIKENNPDIICLQET 38
          +   T+N   I+    + +  +A+ I    PD++ LQE 
Sbjct: 1  MRFMTYN---IKHAELSSLEAIASVINAQAPDVVALQEV 36


>gi|147815906|emb|CAN68199.1| hypothetical protein VITISV_039763 [Vitis vinifera]
          Length = 607

 Score = 38.6 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 9/60 (15%), Positives = 21/60 (35%), Gaps = 9/60 (15%)

Query: 201 THHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
              ++S+          N+   R+D  +++              + R     SDH P+++
Sbjct: 508 QGGVFSWSGXR-----NNQXWARLDRFLVTQNWLDHFSGVV---QSRLPRPTSDHFPILL 559


>gi|308070047|ref|YP_003871652.1| Predicted extracellular nuclease [Paenibacillus polymyxa E681]
 gi|305859326|gb|ADM71114.1| Predicted extracellular nuclease [Paenibacillus polymyxa E681]
          Length = 691

 Score = 38.6 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 23/53 (43%), Gaps = 3/53 (5%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPR---GWTKPSDHTPVIVSLDIPEPRKKQQD 272
           +DH+++SP  +       +           + SDH P++  +D+P   ++   
Sbjct: 591 LDHMLVSPSLSKTSVLDIVHMNADFSAADGRVSDHDPLVAQIDVPRKTEEPPT 643


>gi|291302792|ref|YP_003514070.1| endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis
           DSM 44728]
 gi|290572012|gb|ADD44977.1| Endonuclease/exonuclease/phosphatase [Stackebrandtia nassauensis
           DSM 44728]
          Length = 940

 Score = 38.6 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 19/48 (39%), Gaps = 1/48 (2%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQ 270
           +DHI++SP          +        + SDH P +  L+ P    K 
Sbjct: 758 LDHILVSPALA-KADYEVVHINAEFAEQNSDHDPQVARLNFPPKCTKT 804


>gi|290983315|ref|XP_002674374.1| endonuclease/exonuclease/phosphatase family member [Naegleria
           gruberi]
 gi|284087964|gb|EFC41630.1| endonuclease/exonuclease/phosphatase family member [Naegleria
           gruberi]
          Length = 322

 Score = 38.6 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 2/37 (5%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSL 53
           R+  L      + PDI+CLQE   E   F  + L+ L
Sbjct: 70  RVKKLLRDFTIHQPDILCLQEV--ELACFEKDVLEPL 104


>gi|295689871|ref|YP_003593564.1| endonuclease/exonuclease/phosphatase [Caulobacter segnis ATCC
           21756]
 gi|295431774|gb|ADG10946.1| Endonuclease/exonuclease/phosphatase [Caulobacter segnis ATCC
           21756]
          Length = 288

 Score = 38.6 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 37/282 (13%), Positives = 63/282 (22%), Gaps = 43/282 (15%)

Query: 4   VTVATWNV-----NSIRARIHN-------LAAWIKENNPDIICLQET---KTEDKNFPFE 48
           + VATWN+     +  +            +  + +  N D++  +E    K         
Sbjct: 27  LRVATWNMEHLSEDGAKGCKPRTDADYETMRRYAERLNADVVAFEEVESVKA-----AAR 81

Query: 49  TLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108
                 Y +    + + N                          R  + T          
Sbjct: 82  VFDPAKYQLLIEARPAGNPFPCGEGRTLTRQAVGFAIRKGITVERAPDLTDLQLGD---- 137

Query: 109 GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPII 168
                  G    + +           +   S     +     A     +P      +   
Sbjct: 138 ---PNLRGGVDVTIRAPGHAPLRLLAVHLKSGCFAGDAAKACATLMRQVPILERWIDARA 194

Query: 169 WENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF--------WDYYADSWSKNKG 220
            E      L          +      I      +   S          D     +     
Sbjct: 195 AEGVRFAVLGDFNRRLARADDVVWREIDDADPPNADLSLAEGSAGPKCDPRYSEF----- 249

Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
             IDHI+L   A   L      T   G  + SDH PV+  L 
Sbjct: 250 --IDHIVLDARAARDLEGFEELTYAAG-ERGSDHCPVLARLK 288


>gi|218185789|gb|EEC68216.1| hypothetical protein OsI_36205 [Oryza sativa Indica Group]
          Length = 1032

 Score = 38.6 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 8/68 (11%), Positives = 30/68 (44%), Gaps = 5/68 (7%)

Query: 204 LYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            +++ +        N  +R+D  +       ++ +A++       +  SDH P++++  +
Sbjct: 778 PHTYDNRREGC--NNVKVRLDRAIADDRWRDIVTNAQVVHLV---SPCSDHCPILLNFHV 832

Query: 264 PEPRKKQQ 271
            +  + ++
Sbjct: 833 KDDSRTRK 840


>gi|306821497|ref|ZP_07455099.1| conserved hypothetical protein [Eubacterium yurii subsp.
          margaretiae ATCC 43715]
 gi|304550455|gb|EFM38444.1| conserved hypothetical protein [Eubacterium yurii subsp.
          margaretiae ATCC 43715]
          Length = 144

 Score = 38.6 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 7/42 (16%)

Query: 21 LAAWIKENNPDIICL----QETKTEDK---NFPFETLQSLNY 55
          +  ++KE   DI+ L    QE K  D+   +F    L    Y
Sbjct: 42 IREYLKEKEVDIVFLNEKIQEVKALDESKKDFTNAILHIWGY 83


>gi|220909980|ref|YP_002485291.1| Endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 7425]
 gi|219866591|gb|ACL46930.1| Endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 7425]
          Length = 244

 Score = 38.6 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 30/263 (11%), Positives = 65/263 (24%), Gaps = 29/263 (11%)

Query: 3   VVTVATWNVN----SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
            + +ATWN++        +   +   I+  N D+  L ET  +  +   +  +       
Sbjct: 5   TLRIATWNLDHPKPGSWQKTPAILQQIEAINADVWILTETNNKAVDLAAKGYEKFTSIEY 64

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
           T      N    +              D        +     +      I        + 
Sbjct: 65  TDKGLEQNAYTTIWSRLQAPTQIIKTFDPDLSVCIKVSQPIDLMIYGTIITWHGDRGSDG 124

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
            + +  +   S       ++    E  +  +         +    +       D      
Sbjct: 125 TSKSWEEHYRSIQHHGDDWSRLIQEYSDHKLLVAGDFNQARDGSRWYGTQKGIDLLTAQL 184

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
            R     L +                             N+G  +DH+ +S +      +
Sbjct: 185 DRNHLVCLTDQIQ------------------------PTNRGN-VDHVCISQDLQPFCTA 219

Query: 239 ARIDTKPRGWTKPSDHTPVIVSL 261
           +  +       K SDH  V + L
Sbjct: 220 SFWNNISDQGVKLSDHNGVFIDL 242


>gi|163749176|ref|ZP_02156426.1| hypothetical protein KT99_20084 [Shewanella benthica KT99]
 gi|161331246|gb|EDQ02135.1| hypothetical protein KT99_20084 [Shewanella benthica KT99]
          Length = 365

 Score = 38.6 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 40/114 (35%), Gaps = 20/114 (17%)

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY--SFWDYYADSWSKNK-----GIRID 224
           D     +   S   + ++          D++ LY  S +     +          G  +D
Sbjct: 252 DTRIKPQADMSQGAMGDIAHQLGFYRLQDSYDLYQASQYSLSEQARPATHYYFAQGSVLD 311

Query: 225 HIMLSPEATSL--LHSARIDTKP---RGWTKPS--------DHTPVIVSLDIPE 265
           +I+LS E  +   L  A +       R    PS        DH PV++++ I E
Sbjct: 312 YILLSSEFDAKNDLSLAEVGRYETYDRHLINPSFEHDSQSTDHAPVMITIAIRE 365



 Score = 37.1 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 20/50 (40%)

Query: 21 LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAI 70
          +A ++ E+ PD+I  QE  + D+         L+Y       +  +    
Sbjct: 48 IAKYLNEHQPDVIAFQEVFSPDELETLTKACGLDYFSVLDSPQVMDDFIY 97


>gi|4590406|gb|AAD26567.1|AF126540_1 slit protein [Drosophila melanogaster]
          Length = 1504

 Score = 38.6 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/160 (7%), Positives = 37/160 (23%), Gaps = 2/160 (1%)

Query: 34   CLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR 93
            CL E K ++     + ++S     +      +    I           +           
Sbjct: 1013 CLGEIKCQNNATCIDGVESYKCECQPGFSGEFCDTKIQFCSPEFNPCANGAKCMDHFTHY 1072

Query: 94   FIEATFTINTQTLR--IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFA 151
              +     +       I +          +          +    +  +  E    +   
Sbjct: 1073 SCDCQAGFHGTNCTDNIDDCQNHMCQNGGTCVDGINDYQCRCPDDYTGKYCEGHNMISMM 1132

Query: 152  GDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191
                   Q H+C + + ++ +A  +  + +          
Sbjct: 1133 YPQTSPCQNHECKHGVCFQPNAQGSDYLCRCHPGYTGKWC 1172


>gi|167521309|ref|XP_001744993.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163776607|gb|EDQ90226.1| predicted protein [Monosiga brevicollis MX1]
          Length = 1203

 Score = 38.6 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 6/44 (13%)

Query: 2   SVVTVATWNVNSI----RARI--HNLAAWIKENNPDIICLQETK 39
           S + V T NV+      R+R+  H +   +    PD+ICLQE K
Sbjct: 828 SDLRVMTLNVHEFFDPSRSRLLNHEVNKCVSLFAPDVICLQEVK 871


>gi|147838082|emb|CAN65207.1| hypothetical protein VITISV_016719 [Vitis vinifera]
          Length = 1391

 Score = 38.6 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/118 (11%), Positives = 37/118 (31%), Gaps = 9/118 (7%)

Query: 144 LEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHH 203
            EE     G +         YN  +++ +      +  + ++   +     +        
Sbjct: 617 WEEIRAIRGLWEDPWCVGGDYNITLFQRERSRQGRITSAMRRFAQIVDELGLMDIPLQGG 676

Query: 204 LYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
           ++++          N+   R+D  +++              + R     SDH PV++ 
Sbjct: 677 VFTW-----SGGPNNQSWARLDRFLVNTSWLDQFSGVL---QSRLPRPLSDHFPVLLE 726


>gi|229015042|ref|ZP_04172107.1| hypothetical protein bmyco0001_54100 [Bacillus mycoides DSM 2048]
 gi|228746238|gb|EEL96176.1| hypothetical protein bmyco0001_54100 [Bacillus mycoides DSM 2048]
          Length = 236

 Score = 38.6 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 37/262 (14%), Positives = 72/262 (27%), Gaps = 30/262 (11%)

Query: 4   VTVATWNVNS--IRARIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYHIETC 60
           + +  WN      R +I  +         +I+ + E  K   + +    +Q+   +    
Sbjct: 1   MKIVAWN-AGMAFRKKIDKILPL----KANILVISECEK--PEKWERSVVQNSTDNFLWE 53

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
           G     G+ I++  +  +I  H   D        ++ T         + +          
Sbjct: 54  GDNPNKGIGIITLDKRYKIEIHPDYDKKFRYIIPLKVTGEQEFIMFAVWS---------Q 104

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
             +        + +L        L+EP I  GD+N                   F     
Sbjct: 105 KGEKRYSSYIGQIYLALEKYASLLKEPCIIVGDWNSSKVFDHIKRVKTHSEVVEFLEGFG 164

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
                  N         +   +H             K     ID +  S    + L S  
Sbjct: 165 IKSAYHCNTYEKQGQEKSPTYYHR----------KDKTSSYHIDFLFASEIFLNQLESIE 214

Query: 241 IDTKPRGWTKPSDHTPVIVSLD 262
           + +    W + SDH P+    +
Sbjct: 215 VGSYE-EWIEFSDHMPISAEFN 235


>gi|255947092|ref|XP_002564313.1| Pc22g02690 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211591330|emb|CAP97557.1| Pc22g02690 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 681

 Score = 38.6 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 23/58 (39%), Gaps = 6/58 (10%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYHIETCG 61
            V +W       R   +   ++ +N DI+CLQE  +    NF  E L   +Y      
Sbjct: 336 RVLSW-----EFRRELILNELRSHNADIVCLQEVDQGSYNNFFREQLAYNDYKGVYWP 388


>gi|119946106|ref|YP_943786.1| hypothetical protein Ping_2456 [Psychromonas ingrahamii 37]
 gi|119864710|gb|ABM04187.1| Endonuclease/exonuclease/phosphatase [Psychromonas ingrahamii 37]
          Length = 279

 Score = 38.6 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 40/246 (16%), Positives = 62/246 (25%), Gaps = 41/246 (16%)

Query: 18  IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPI 77
           I N    I+E   D +  QE K     FP +    L+               I       
Sbjct: 62  IENFETLIQEYPCDFLLFQEVK-----FPKKIASVLDAFSYAMASNIETSQHIYGVLTAT 116

Query: 78  EIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF 137
           +I        L  Q      T         +   +    +  T    +           F
Sbjct: 117 KIAFTTISSHLTHQREVGLITHK------SMLITHHKLPDGRTLHIVNIHGINFVSIKGF 170

Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA 197
             +  +++  L       I+    +      W       LE  Q    L+     +    
Sbjct: 171 IKELEKIKAVLHSCSGPIIVAGDFNN-----WTKKRIMALETFQHALGLEKADIQEGHHV 225

Query: 198 THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257
            H                       +DHI        LL +  IDTK     K SDH P+
Sbjct: 226 KHIFAKP------------------LDHIFYRE--LKLLQAEAIDTK-----KISDHNPI 260

Query: 258 IVSLDI 263
             +  +
Sbjct: 261 YATFSV 266


>gi|325920888|ref|ZP_08182783.1| putative extracellular nuclease [Xanthomonas gardneri ATCC 19865]
 gi|325548640|gb|EGD19599.1| putative extracellular nuclease [Xanthomonas gardneri ATCC 19865]
          Length = 572

 Score = 38.6 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 22/56 (39%), Gaps = 14/56 (25%)

Query: 222 RIDHIMLSPEATSLLHSAR---IDTKPR-----------GWTKPSDHTPVIVSLDI 263
           R+DH +LSP     L  A    I+               G  + SDH PV++   +
Sbjct: 517 RLDHALLSPAMAKQLRGAVEWHINADVMDDAGYAKRNLAGPWRSSDHDPVLLGFSL 572


>gi|289669936|ref|ZP_06491011.1| nuclease [Xanthomonas campestris pv. musacearum NCPPB4381]
          Length = 378

 Score = 38.6 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 22/56 (39%), Gaps = 14/56 (25%)

Query: 222 RIDHIMLSPEATSLLHSAR---IDTKPR-----------GWTKPSDHTPVIVSLDI 263
           R+DH +LSP     L  A    I+               G  + SDH PV++   +
Sbjct: 323 RLDHALLSPAMAKQLRGAVEWHINADVMDAAGYAKRNLPGPWRSSDHDPVLLGFSL 378


>gi|254508339|ref|ZP_05120461.1| metal-dependent hydrolase [Vibrio parahaemolyticus 16]
 gi|219548753|gb|EED25756.1| metal-dependent hydrolase [Vibrio parahaemolyticus 16]
          Length = 295

 Score = 38.6 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 29/243 (11%), Positives = 63/243 (25%), Gaps = 17/243 (6%)

Query: 25  IKENNPDIICLQETKTEDKNFPFETLQSLNYHIET----CGQKSYNGVAILSKYQPIEIV 80
               + DI+  QE    D+    + +    Y +        + + +    +++Y    + 
Sbjct: 62  FSSMDSDIVAFQEV--NDEKALRKVI-GKQYRVFFSTRRNPEHAAHQFTAINQYTGFAVR 118

Query: 81  THLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQ 140
             +   + +           +   +  + +          S     + S   R       
Sbjct: 119 EGISVIEKESLQLDTSHRSKLRFASYVVISPTSDTPIHALSVHLKARCSGAFRHNDACRT 178

Query: 141 RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHD 200
                E L                      N +            L  +   D+      
Sbjct: 179 LKRQGEALNHWIREREAHGERYMILGDFNHNMSYPKD-------WLWEIVSQDSTAKLAT 231

Query: 201 THHLYSFWDYYADSWSKNKGIR--IDHIMLSPEA-TSLLHSARIDTKPRGWTKPSDHTPV 257
                +      ++ SK    R  IDH++ S +   S +      T      K SDH P+
Sbjct: 232 RETKATCKVRSRNNPSKTHQFRSLIDHVITSDQISVSKIEQRNYKTDDLFRYKLSDHCPI 291

Query: 258 IVS 260
            ++
Sbjct: 292 TLT 294


>gi|166714173|ref|ZP_02245380.1| nuclease [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 572

 Score = 38.6 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 22/56 (39%), Gaps = 14/56 (25%)

Query: 222 RIDHIMLSPEATSLLHSAR---IDTKPR-----------GWTKPSDHTPVIVSLDI 263
           R+DH +LSP     L  A    I+               G  + SDH PV++   +
Sbjct: 517 RLDHALLSPAMAKQLRGAVEWHINADVMDAAGYAKRNLPGPWRSSDHDPVLLGFSL 572


>gi|312883334|ref|ZP_07743060.1| Endonuclease/Exonuclease/phosphatase family protein [Vibrio
           caribbenthicus ATCC BAA-2122]
 gi|309368950|gb|EFP96476.1| Endonuclease/Exonuclease/phosphatase family protein [Vibrio
           caribbenthicus ATCC BAA-2122]
          Length = 303

 Score = 38.6 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 35/262 (13%), Positives = 66/262 (25%), Gaps = 41/262 (15%)

Query: 18  IHNLAAWIKENNPDIICLQET-------KT--EDKNFPFETLQSLNYHIETCGQKSYNGV 68
           +  L  +  + + DI+  QE        K    D              I      +    
Sbjct: 53  LRLLRKYFIKTSADIMAFQEVNDVSIISKVVGSDYKVILSQRSKAENQIHQFSDINQYTG 112

Query: 69  AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT------QTLRIGNLYLPHGNPITST 122
             + K   +     +  D          +   + T        L +        N     
Sbjct: 113 FAVKKSFKVRDHKDIQLDKRLKSRLRFASYIELTTPSKQSVHLLSVHLKAGCRKNYQEKR 172

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                   +     +  +R + +   I  GD+N        +   +        L  + +
Sbjct: 173 NCRILKEQLININSWIREREKYQHDYIVLGDFNSQIADEAKWAWYLISKKTQAVLTSQNT 232

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID 242
             +      T             S + Y +          IDHI++S        +A+  
Sbjct: 233 TAQCYVRSKTKRA----------SVFKYKSI---------IDHIIVSSS--HTFTTAKQL 271

Query: 243 ----TKPRGWTKPSDHTPVIVS 260
                  R +   SDH PVI+ 
Sbjct: 272 PFKTKDVRQYE-LSDHCPVIIE 292


>gi|296454683|ref|YP_003661826.1| endonuclease/exonuclease/phosphatase [Bifidobacterium longum subsp.
           longum JDM301]
 gi|296184114|gb|ADH00996.1| Endonuclease/exonuclease/phosphatase [Bifidobacterium longum subsp.
           longum JDM301]
          Length = 370

 Score = 38.6 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 31/260 (11%), Positives = 65/260 (25%), Gaps = 47/260 (18%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTED--KNFPFETLQSLNYHIETCGQ 62
            V T+NV   +A    +   +++   +++ LQET TED  K      ++    + +    
Sbjct: 150 RVMTFNVYKGQADPQAIVELVRDQRVEVLALQET-TEDFVKKLNEAGIEHYLPYAQVSSS 208

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITST 122
               G  + S     +                         + + +       G      
Sbjct: 209 DGVFGNGLWSATPLADPADDDVNSSASFMPGGTVDMGGQQIRFVSVHTTAPVPG------ 262

Query: 123 KYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS 182
                  W +        R   +   IF GD+N         + +               
Sbjct: 263 ---YWRQWKRSLDELGPMRGHTDTRYIFMGDFNATYDHTPFRDFL--------------- 304

Query: 183 FQKLQNMGFTDAIRATHDTHHLYSFWDYY--ADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
                                 +S+         ++      IDH++L           +
Sbjct: 305 ------GDRFVDAARESGHGFTFSWPTNRVYMPMFAG-----IDHVVLDQGM--KAGQCK 351

Query: 241 IDTKPRGWTKPSDHTPVIVS 260
           +          SDH  ++ +
Sbjct: 352 VVKVE-----GSDHAALLAT 366


>gi|326406489|gb|ADZ63560.1| endonuclease/exonuclease/phosphatase family protein [Lactococcus
           lactis subsp. lactis CV56]
          Length = 352

 Score = 38.6 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 33/269 (12%), Positives = 66/269 (24%), Gaps = 30/269 (11%)

Query: 14  IRARIHNLAAWIKENNPDIICLQET--------KTEDKNFPFETLQSL------NYHIET 59
           +++ I      I +  PD   +QE         +  +       L         NY    
Sbjct: 93  VKSAIQEDIRLINKEKPDFGNIQEIDWQGDRSQQVNEPQMVRAGLPDYTSVLTQNYDSAY 152

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-TQTLRIGNLYLPHGNP 118
                   +              +                  +  +   +  L + + + 
Sbjct: 153 LFYPVTKPIGKAKSGIMTYSKYEIESSTRYKLPIETNFNKFFDLDRAFSVSILPIKNSDK 212

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
                     ++I        Q L L + +       +    +           A     
Sbjct: 213 KFVIFNTHLSAFITDQKIQKQQLLTLFDEMK----KYVSKGDYVICGADYNHALAGKAHP 268

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWD----YYADSWSKNKGIRIDHIMLSPEATS 234
                ++      T  +R    T+   +       Y   +     GI ID  ++S     
Sbjct: 269 ELTWMKEFPTENLTKGMRVVAPTNAP-TVRSLDYAYDKKNPKNTFGI-IDGFLVSNNIKD 326

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            L    ID +     K SDH PV++   +
Sbjct: 327 -LKIQTIDNQ----FKSSDHQPVVMDFSL 350


>gi|320538511|ref|ZP_08038372.1| endonuclease/exonuclease/phosphatase family protein [Treponema
           phagedenis F0421]
 gi|320144618|gb|EFW36373.1| endonuclease/exonuclease/phosphatase family protein [Treponema
           phagedenis F0421]
          Length = 353

 Score = 38.6 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 37/262 (14%), Positives = 69/262 (26%), Gaps = 55/262 (20%)

Query: 30  PDIICLQET---KTEDKNFPFETLQSLNYHIETCGQKSYN---GVAILSKYQPIEIVTHL 83
           PDI+ LQE    +  +  F  +  +  +Y+         N     A+LSK   +++  H 
Sbjct: 112 PDILILQEIEGERVIND-FCRQLSRKESYNYAVITPIEKNAAFTTALLSKLPILDVFIHR 170

Query: 84  PGDDLDVQARFIEATFTI----NTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFAS 139
              + +      E    I      + L + + +        + +                
Sbjct: 171 LHTEKESVRPLCEVWINIGSEEYPEPLVVFSTHWKSKLGKNTAEIRRMQEKQVFQKIQEL 230

Query: 140 QRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATH 199
           ++   +   +  GD+N   +  D    +    + C  L       +              
Sbjct: 231 KKTNPDIHYVICGDFNQPLEEFDLLTELPNSWNRCEYLRALSVNAQPGGSFC-------- 282

Query: 200 DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARID----------------- 242
                     Y  + W       IDHI  S   +       I+                 
Sbjct: 283 ----------YKGN-WQA-----IDHIFYSENLSDN-KGLDIEHFAVIAIPPLITSAGKP 325

Query: 243 --TKPRGWTKPSDHTPVIVSLD 262
                      SDH P+ V L 
Sbjct: 326 NAYSVFSGKGYSDHLPIGVRLK 347


>gi|330939748|ref|XP_003305882.1| hypothetical protein PTT_18837 [Pyrenophora teres f. teres 0-1]
 gi|311316921|gb|EFQ86022.1| hypothetical protein PTT_18837 [Pyrenophora teres f. teres 0-1]
          Length = 756

 Score = 38.6 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 9/23 (39%), Positives = 15/23 (65%)

Query: 16  ARIHNLAAWIKENNPDIICLQET 38
           +R   + A ++E + DI+CLQE 
Sbjct: 410 SRRELILAELRERDADIVCLQEI 432


>gi|281491447|ref|YP_003353427.1| endonuclease/exonuclease/phosphatase family protein [Lactococcus
           lactis subsp. lactis KF147]
 gi|281375165|gb|ADA64678.1| Endonuclease/exonuclease/phosphatase family protein [Lactococcus
           lactis subsp. lactis KF147]
          Length = 352

 Score = 38.6 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 33/269 (12%), Positives = 66/269 (24%), Gaps = 30/269 (11%)

Query: 14  IRARIHNLAAWIKENNPDIICLQET--------KTEDKNFPFETLQSL------NYHIET 59
           +++ I      I +  PD   +QE         +  +       L         NY    
Sbjct: 93  VKSAIQEDIRLINKEKPDFGNIQEIDWQGDRSQQVNEPQMVRAGLPDYTSVLTQNYDSAY 152

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-TQTLRIGNLYLPHGNP 118
                   +              +                  +  +   +  L + + + 
Sbjct: 153 LFYPVTKPIGKAKSGIMTYSKYEIESSTRYKLPIETNFNKFFDLDRAFSVSILPIKNSDK 212

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
                     ++I        Q L L + +       +    +           A     
Sbjct: 213 KFVIFNTHLSAFITDQKIQKQQLLTLFDEMK----KYVSKGDYVICGADYNHALAGKAHP 268

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWD----YYADSWSKNKGIRIDHIMLSPEATS 234
                ++      T  +R    T+   +       Y   +     GI ID  ++S     
Sbjct: 269 ELTWMKEFPTENLTKGMRVVAPTNAP-TVRSLDYAYDKKNPKNTFGI-IDGFLVSNNIKD 326

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            L    ID +     K SDH PV++   +
Sbjct: 327 -LKIQTIDNQ----FKSSDHQPVVMDFSL 350


>gi|198401906|gb|ACH87585.1| hypothetical protein [Dunaliella viridis]
          Length = 2229

 Score = 38.6 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 7/42 (16%)

Query: 4    VTVA--TWNVNSIRARIHNLAAWI---KENNPDIIC--LQET 38
            + V   +WNVN  R    ++  W+     +  DI+C  LQE 
Sbjct: 1273 LRVVVGSWNVNVTRPSQRSMYEWLGCHAADGADIVCVGLQEV 1314


>gi|255077378|ref|XP_002502331.1| predicted protein [Micromonas sp. RCC299]
 gi|226517596|gb|ACO63589.1| predicted protein [Micromonas sp. RCC299]
          Length = 328

 Score = 38.6 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 21/48 (43%), Gaps = 9/48 (18%)

Query: 223 IDHIMLSPEATSLLHSA-------RIDTKPRGWTKPSDHTPVIVSLDI 263
           ID++ +       + SA        + T     T+ SDH P+ V L++
Sbjct: 280 IDYVFVDDGVA--VRSAMPLPGRDEVATGLPDATRGSDHLPLTVDLEL 325


>gi|218187613|gb|EEC70040.1| hypothetical protein OsI_00627 [Oryza sativa Indica Group]
          Length = 1499

 Score = 38.6 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 50/152 (32%), Gaps = 10/152 (6%)

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
            +   I     D+      R      +    E   ++     I       +  +   N+A
Sbjct: 551 YNFRYIDVLIKDESCPVQWRCTFVYGEPKASERHNMWTLLRRIKSNSAAPWCLVGDFNEA 610

Query: 174 CFTLEVR--QSFQKLQNMGFTDAIRATHDTHHLYS---F-WDYYADSWSKNKGIRIDHIM 227
            +  E       ++ Q M F + +         ++   + +D        N  +R+D  +
Sbjct: 611 MWQFEHFSDHKRREKQIMDFREVLSHCDVFDLGFTGAPWTFDNKQKGR-NNVQVRLDRTV 669

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
            S   +SL  +A +          SDH+P+++
Sbjct: 670 ASQSWSSLFPAAEV---IHLTVSSSDHSPILL 698


>gi|218186460|gb|EEC68887.1| hypothetical protein OsI_37529 [Oryza sativa Indica Group]
          Length = 1765

 Score = 38.6 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 22/175 (12%), Positives = 56/175 (32%), Gaps = 14/175 (8%)

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
            + L    P     +      ++   R  S    + +         I       +    +
Sbjct: 561 YVQLSPEEPQWHVTFVYGEPRVENRHRMWSLLRTIHQSSSLPWAV-IGDFNETMWQFEHF 619

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
                   +++     LQ+    D              +D   + W +N  +R+D ++  
Sbjct: 620 SRTPRGEPQMQDFRDVLQDCELHDLGFKGVPHT-----YDNKREGW-RNVKVRLDRVVAD 673

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTS----QNMKP 280
            +   +  +A++       +  SDH P++++L + +P + +Q           +P
Sbjct: 674 DKWRDIYSTAQVVHLV---SPCSDHCPILLNLVVKDPHQLRQKCLHYEIVWEREP 725


>gi|189242004|ref|XP_001807057.1| PREDICTED: hypothetical protein, partial [Tribolium castaneum]
          Length = 765

 Score = 38.6 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 9/165 (5%), Positives = 29/165 (17%)

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
            +++      +  +G                          +      +          +
Sbjct: 433 YDWNWYWHWNRFNSGYNWYRINFNFWSFNFRKWYWFYSGYNWYWVNLNLWRFDFWKRYWF 492

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
               +      +D   S         + R            +N             +  +
Sbjct: 493 NSWYDWNWYRNWDRFHSRYNWKWYGFNTRYNWNWVNFDFWSFNFRKWYWFYSGYNWYWVN 552

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK 217
                          +    +  R     H  Y++  Y  ++   
Sbjct: 553 LNLWRFDFWKRYWFNSWYDWNWYRNWDRFHSRYNWKWYGFNTRYN 597



 Score = 37.1 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 6/165 (3%), Positives = 25/165 (15%)

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
            +++      + ++               +    +           F        +    
Sbjct: 359 YDWNWYRNWDRFHSRYNWKWYGFNTGYNWNWVNFNFWSFNFRKWYWFYSRYNWYWVNFNL 418

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
                                     +              +N             +  +
Sbjct: 419 WRFDFWKRYWFNSWYDWNWYWHWNRFNSGYNWYRINFNFWSFNFRKWYWFYSGYNWYWVN 478

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK 217
                          +    +  R     H  Y++  Y  ++   
Sbjct: 479 LNLWRFDFWKRYWFNSWYDWNWYRNWDRFHSRYNWKWYGFNTRYN 523



 Score = 37.1 bits (84), Expect = 3.1,   Method: Composition-based stats.
 Identities = 8/160 (5%), Positives = 27/160 (16%)

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
              G    +              +            +       N  +      Y  +  
Sbjct: 153 FWKGYWFNSWYDWNWYRNWDRFHSRYNWKWYGFNTGYNWNWVNFNFWSFNFRKWYWFYSR 212

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
                   +   +      + +   +          +N             +  +     
Sbjct: 213 YNWYWVNFNLWRFDFWKRYWFNSWYDWNWINFNFWSFNFRKWYWFYSGYNWYWVNLNLWR 272

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSK 217
                     +    +  R     H  Y++  Y  ++   
Sbjct: 273 FDFWKRYWFNSWYDWNWYRNWDRFHSRYNWKWYGFNTRYN 312


>gi|156344708|ref|XP_001621283.1| hypothetical protein NEMVEDRAFT_v1g248701 [Nematostella vectensis]
 gi|156207057|gb|EDO29183.1| predicted protein [Nematostella vectensis]
          Length = 492

 Score = 38.6 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 66/216 (30%), Gaps = 26/216 (12%)

Query: 81  THLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQ 140
                      A + E   +       + N      + I   +      W      +A  
Sbjct: 164 FCFINSHFAAHAEYTEYRNSDGLCVYVVSNYKTYSWDWIGLYRVGFHHIWDYEMYEWAVG 223

Query: 141 RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHD 200
             +       A  ++ +P+    Y    +       + V ++F+ LQ+     +     +
Sbjct: 224 DGDEYGENGCAVLFDCLPEEPGHYVMAYYSYKMEAIISVSEAFELLQSKDAKLSFIDFKE 283

Query: 201 THHLY--SF--------WD-----YYADSWSKNKGIRIDHIMLSPEATSLLHSAR-IDTK 244
              ++  ++        WD     Y   +W+     R        E      +A+ I  K
Sbjct: 284 GPLVFKPTYKYNPGSSDWDTESGKYRKPAWTDRVLWR--------EKPEKADTAQLITYK 335

Query: 245 PRGWTKPSDHTPV--IVSLDIPEPRKKQQDSTSQNM 278
                  SDH PV  ++SLD+P+   K +D     M
Sbjct: 336 SHDQYMTSDHRPVSALLSLDLPDSALKIEDPIDWKM 371


>gi|15672926|ref|NP_267100.1| hypothetical protein L169897 [Lactococcus lactis subsp. lactis
           Il1403]
 gi|12723881|gb|AAK05042.1|AE006329_1 unknown protein [Lactococcus lactis subsp. lactis Il1403]
          Length = 352

 Score = 38.6 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 33/269 (12%), Positives = 66/269 (24%), Gaps = 30/269 (11%)

Query: 14  IRARIHNLAAWIKENNPDIICLQET--------KTEDKNFPFETLQSL------NYHIET 59
           +++ I      I +  PD   +QE         +  +       L         NY    
Sbjct: 93  VKSAIQEDIRLINKEKPDFGNIQEIDWQGDRSQQVNEPQMVRAGLPDYTSVLTQNYDSAY 152

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-TQTLRIGNLYLPHGNP 118
                   +              +                  +  +   +  L + + + 
Sbjct: 153 LFYPVTKPIGKAKSGIMTYSKYEIESSTRYKLPIETNFNKFFDLDRAFSVSILPIKNSDK 212

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
                     ++I        Q L L + +       +    +           A     
Sbjct: 213 KFVIFNTHLSAFITDQKIQKQQLLTLFDEMK----KYVSKGDYVICGADYNHALAGKAHP 268

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWD----YYADSWSKNKGIRIDHIMLSPEATS 234
                ++      T  +R    T+   +       Y   +     GI ID  ++S     
Sbjct: 269 ELTWMKEFPTENLTKGMRVVAPTNAP-TVRSLDYAYDKKNPKNTFGI-IDGFLVSNNIKD 326

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            L    ID +     K SDH PV++   +
Sbjct: 327 -LKIQTIDNQ----FKSSDHQPVVMDFSL 350


>gi|331237187|ref|XP_003331251.1| hypothetical protein PGTG_13214 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309310241|gb|EFP86832.1| hypothetical protein PGTG_13214 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 710

 Score = 38.6 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 8/50 (16%), Positives = 17/50 (34%), Gaps = 4/50 (8%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQD 272
           ID   ++      +    +  +       SDH P+ ++L + E       
Sbjct: 370 IDLCWVNTHCKPRIRECSVALE----NHASDHQPIRLTLSLTEALLDPPP 415


>gi|4522005|gb|AAD21778.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1715

 Score = 38.6 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 32/268 (11%), Positives = 76/268 (28%), Gaps = 45/268 (16%)

Query: 2   SVVTVATWNVNSI------RARIHNLAA--WIKENNPDIICLQETKTEDKNFPFETLQSL 53
           S + V  WN   +      R R+  +    ++     D++ L ETK +  N+  +    +
Sbjct: 361 SPMRVGFWNCQGLGQPLTVR-RLEEVQRVYFL-----DMLFLIETK-QQDNYTRDLGVKM 413

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
            +               LS    +    HL    +    R ++           +  +Y 
Sbjct: 414 GFEDMCIISP-----RGLSGGLVVYWKKHLSIQVISHDVRLVDLYVEYKNFNFYLSCIYG 468

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
                               + +          P +  GD+N I   ++          +
Sbjct: 469 H----------PIPSERHHLWEKLQRVSAHRSGPWMMCGDFNEILNLNEKKGGRRRSIGS 518

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEAT 233
                   +   ++++             + YS+     +   +     +D + ++ +  
Sbjct: 519 LQNFTNMINCCNMKDLKS---------KGNPYSWVGKRQN---ETIESCLDRVFINSDWQ 566

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           +   +             SDH PVI+ +
Sbjct: 567 ASFPAFE---TEFLPIAGSDHAPVIIDI 591


>gi|85703791|ref|ZP_01034895.1| endonuclease/exonuclease/phosphatase family protein [Roseovarius
           sp. 217]
 gi|85672719|gb|EAQ27576.1| endonuclease/exonuclease/phosphatase family protein [Roseovarius
           sp. 217]
          Length = 126

 Score = 38.6 bits (88), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 21/53 (39%), Gaps = 12/53 (22%)

Query: 223 IDHIMLSPEATSL---------LHS--ARIDTKPR-GWTKPSDHTPVIVSLDI 263
           +D+I++SP+  +                  +   R      SDH PV + L++
Sbjct: 74  LDYILISPDLMARRPVWRIWHPFDDPGCWDNRDLREALLAASDHFPVTLDLEL 126


>gi|157417476|gb|ABV54895.1| exodeoxyribonuclease-like protein [Streptomyces pristinaespiralis]
          Length = 144

 Score = 38.2 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 24/67 (35%), Gaps = 2/67 (2%)

Query: 145 EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA--THDTH 202
              ++  GD+NI     D  N      ++ F  E R+   ++ +      +      D  
Sbjct: 78  GREVVVCGDWNIAHHEADLKNWKSNRKNSGFLPEEREWLGRVFSEAEYVDVVRDLHPDQE 137

Query: 203 HLYSFWD 209
             Y++W 
Sbjct: 138 GPYTWWS 144


>gi|8615|emb|CAA37910.1| slit protein [Drosophila melanogaster]
          Length = 1480

 Score = 38.2 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/160 (7%), Positives = 37/160 (23%), Gaps = 2/160 (1%)

Query: 34   CLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR 93
            CL E K ++     + ++S     +      +    I           +           
Sbjct: 989  CLGEIKCQNNATCIDGVESYKCECQPGFSGEFCDTKIQFCSPEFNPCANGAKCMDHFTHY 1048

Query: 94   FIEATFTINTQTLR--IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFA 151
              +     +       I +          +          +    +  +  E    +   
Sbjct: 1049 SCDCQAGFHGTNCTDNIDDCQNHMCQNGGTCVDGINDYQCRCPDDYTGKYCEGHNMISMM 1108

Query: 152  GDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191
                   Q H+C + + ++ +A  +  + +          
Sbjct: 1109 YPQTSPCQNHECKHGVCFQPNAQGSDYLCRCHPGYTGKWC 1148


>gi|332194059|gb|AEE32180.1| Type I inositol-1,4,5-trisphosphate 5-phosphatase 11 [Arabidopsis
           thaliana]
          Length = 271

 Score = 38.2 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 5/46 (10%)

Query: 4   VTVATWNVNSIRARIHNLAAWI-KENNPD--IICLQET-KTEDKNF 45
           + + TWN+N       +L   + KE   D  ++ LQE  K      
Sbjct: 56  IRIITWNMNG-NVSYEDLVELVGKERKFDLLVVGLQEAPKANVDQL 100


>gi|324995051|gb|EGC26964.1| RgfB protein [Streptococcus sanguinis SK678]
 gi|327462906|gb|EGF09227.1| RgfB protein [Streptococcus sanguinis SK1]
          Length = 271

 Score = 38.2 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 28/244 (11%), Positives = 65/244 (26%), Gaps = 9/244 (3%)

Query: 18  IHNLAAWIKENNPDIICLQETK--TEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75
           ++ LA  I +   D+ICLQE    TE +                  Q  +    +    +
Sbjct: 21  LNELAERILQEKYDVICLQEVNQLTESEQVVQAPFYQAVEGAIEIHQDHFALCLVEKLAE 80

Query: 76  PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135
                      +      + E    ++ + L    + +   N          +       
Sbjct: 81  AGLDYHWSWAYNHIGFDIYNEGVAILSRKPLTPREVLVSEANDPRDYHTRKVLLAETEVD 140

Query: 136 RF---ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN--MG 190
                 +          F G++  + +        +           +Q +Q +    + 
Sbjct: 141 GQLLTIASCHLSWWDKGFQGEWAKLEEELLKAETPLVLMGDFNNPVGQQGYQTILASPLK 200

Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK 250
             D+  A  +     +     A        ++ID++  S      +  + +    +    
Sbjct: 201 LQDSHTAAKEAIGEATVEGTIAGWDDNKHALKIDYVFTSQGMD--VERSAVVFDGKETPV 258

Query: 251 PSDH 254
            SDH
Sbjct: 259 VSDH 262


>gi|323450990|gb|EGB06869.1| hypothetical protein AURANDRAFT_71920 [Aureococcus anophagefferens]
          Length = 556

 Score = 38.2 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 7/45 (15%)

Query: 15  RARIHNLAAWIKENNPDIICLQETKTEDKNFPFE---TLQSLNYH 56
           RAR+  +   + + N D+ICLQE   +  +F  +    ++S  Y 
Sbjct: 256 RARV--VIQELIDTNADVICLQE--AQRDHFERDVEPAMKSAGYE 296


>gi|290960579|ref|YP_003491761.1| hydrolase [Streptomyces scabiei 87.22]
 gi|260650105|emb|CBG73221.1| putative hydrolase [Streptomyces scabiei 87.22]
          Length = 371

 Score = 38.2 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 10/55 (18%), Positives = 21/55 (38%), Gaps = 14/55 (25%)

Query: 223 IDHIMLSPEATSLLHSARIDT----KPR----------GWTKPSDHTPVIVSLDI 263
           +D+++  PE    + +  ++      PR             + SDH  +   LD+
Sbjct: 317 LDYLLFGPELWERVTNVGVERRGIWAPRTFPSFDTVTSKADQASDHAALFADLDV 371


>gi|169787478|gb|ACA80178.1| putative DNA lyase [Colletotrichum cereale]
          Length = 233

 Score = 38.2 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 22/57 (38%)

Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81
           +    DI+ +QETK + K+   + +    + +     K   G + ++ Y       
Sbjct: 2  FEILEADIVIMQETKIQRKDLHDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATCC 58


>gi|169787448|gb|ACA80163.1| putative DNA lyase [Colletotrichum cereale]
          Length = 233

 Score = 38.2 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 22/57 (38%)

Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81
           +    DI+ +QETK + K+   + +    + +     K   G + ++ Y       
Sbjct: 2  FEILEADIVIMQETKIQRKDLHDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATCC 58


>gi|169787434|gb|ACA80156.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787472|gb|ACA80175.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787474|gb|ACA80176.1| putative DNA lyase [Colletotrichum cereale]
          Length = 233

 Score = 38.2 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 22/57 (38%)

Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81
           +    DI+ +QETK + K+   + +    + +     K   G + ++ Y       
Sbjct: 2  FEILEADIVIMQETKIQRKDLHDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATCC 58


>gi|169787348|gb|ACA80113.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787446|gb|ACA80162.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787462|gb|ACA80170.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787492|gb|ACA80185.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787494|gb|ACA80186.1| putative DNA lyase [Colletotrichum cereale]
          Length = 233

 Score = 38.2 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 22/57 (38%)

Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81
           +    DI+ +QETK + K+   + +    + +     K   G + ++ Y       
Sbjct: 2  FEILEADIVIMQETKIQRKDLHDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATCC 58


>gi|169787346|gb|ACA80112.1| putative DNA lyase [Colletotrichum cereale]
          Length = 233

 Score = 38.2 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 22/57 (38%)

Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81
           +    DI+ +QETK + K+   + +    + +     K   G + ++ Y       
Sbjct: 2  FEILEADIVIMQETKIQRKDLHDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATCC 58


>gi|169787332|gb|ACA80105.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787334|gb|ACA80106.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787336|gb|ACA80107.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787338|gb|ACA80108.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787340|gb|ACA80109.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787342|gb|ACA80110.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787344|gb|ACA80111.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787352|gb|ACA80115.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787410|gb|ACA80144.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787416|gb|ACA80147.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787418|gb|ACA80148.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787438|gb|ACA80158.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787444|gb|ACA80161.1| putative DNA lyase [Colletotrichum cereale]
          Length = 233

 Score = 38.2 bits (87), Expect = 1.1,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 22/57 (38%)

Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81
           +    DI+ +QETK + K+   + +    + +     K   G + ++ Y       
Sbjct: 2  FEILEADIVIMQETKIQRKDLHDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATCC 58


>gi|302851072|ref|XP_002957061.1| hypothetical protein VOLCADRAFT_98156 [Volvox carteri f.
           nagariensis]
 gi|300257617|gb|EFJ41863.1| hypothetical protein VOLCADRAFT_98156 [Volvox carteri f.
           nagariensis]
          Length = 581

 Score = 38.2 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 24/84 (28%), Gaps = 2/84 (2%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQP 76
           R   L   I E + DIICLQE    D+    + L  L Y      + +   +        
Sbjct: 67  RRPLLLQEILEADADIICLQELNHFDEL--DQVLSGLGYEGAFREKHASPALKYEYPPDG 124

Query: 77  IEIVTHLPGDDLDVQARFIEATFT 100
           + +                 +   
Sbjct: 125 MAVFYRRSRFRCCPNGVEGRSFHD 148


>gi|294667784|ref|ZP_06732994.1| extracellular nuclease [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292602410|gb|EFF45851.1| extracellular nuclease [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 572

 Score = 38.2 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 22/56 (39%), Gaps = 14/56 (25%)

Query: 222 RIDHIMLSPEATSLLHSA---RIDTKPR-----------GWTKPSDHTPVIVSLDI 263
           R+DH +LSP     L  A    I+               G  + SDH PV++   +
Sbjct: 517 RLDHALLSPAMAKQLRGAAEWHINADVMDAAGYAKRNLPGPWRSSDHDPVLLGFSL 572


>gi|294627485|ref|ZP_06706068.1| extracellular nuclease [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292598116|gb|EFF42270.1| extracellular nuclease [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
          Length = 572

 Score = 38.2 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 22/56 (39%), Gaps = 14/56 (25%)

Query: 222 RIDHIMLSPEATSLLHSA---RIDTKPR-----------GWTKPSDHTPVIVSLDI 263
           R+DH +LSP     L  A    I+               G  + SDH PV++   +
Sbjct: 517 RLDHALLSPAMAKQLRGAAEWHINADVMDAAGYAKRNLPGPWRSSDHDPVLLGFSL 572


>gi|289664940|ref|ZP_06486521.1| nuclease [Xanthomonas campestris pv. vasculorum NCPPB702]
          Length = 572

 Score = 38.2 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 22/56 (39%), Gaps = 14/56 (25%)

Query: 222 RIDHIMLSPEATSLLHSA---RIDTKPR-----------GWTKPSDHTPVIVSLDI 263
           R+DH +LSP     L  A    I+               G  + SDH PV++   +
Sbjct: 517 RLDHALLSPAMAKQLRGAAEWHINADVMDAAGYAKRNLPGPWRSSDHDPVLLGFSL 572


>gi|194756234|ref|XP_001960384.1| GF13339 [Drosophila ananassae]
 gi|190621682|gb|EDV37206.1| GF13339 [Drosophila ananassae]
          Length = 1502

 Score = 38.2 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/160 (6%), Positives = 38/160 (23%), Gaps = 2/160 (1%)

Query: 34   CLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR 93
            CL E K ++     + ++S +   +      +    I           +           
Sbjct: 1010 CLGEIKCQNNATCVDGVESYHCECQPGFTGEFCDTKIQFCSAEFNPCQNGAKCLDHFTHY 1069

Query: 94   FIEATFTINTQTLR--IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFA 151
              +     +       + +          +          +    +  +  E    +   
Sbjct: 1070 SCDCQAGFHGTNCTDNVDDCQNHMCQNGGTCVDGINDYVCRCPDDYTGKYCEGHNMISMM 1129

Query: 152  GDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191
                   Q H+C + + ++ +A  +  + +          
Sbjct: 1130 YPQTSPCQNHECKHGVCFQPNAQGSDYLCRCHPGYTGKWC 1169


>gi|78045838|ref|YP_362013.1| putative extracellular nuclease [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|78034268|emb|CAJ21913.1| putative extracellular nuclease [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 572

 Score = 38.2 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 22/56 (39%), Gaps = 14/56 (25%)

Query: 222 RIDHIMLSPEATSLLHSA---RIDTKPR-----------GWTKPSDHTPVIVSLDI 263
           R+DH +LSP     L  A    I+               G  + SDH PV++   +
Sbjct: 517 RLDHALLSPAMAKQLRGAAEWHINADVMDDAGYAKRNLPGPWRSSDHDPVLLGFSL 572


>gi|308153331|gb|ADO14992.1| RT09975p [Drosophila melanogaster]
          Length = 1444

 Score = 38.2 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/160 (7%), Positives = 37/160 (23%), Gaps = 2/160 (1%)

Query: 34   CLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR 93
            CL E K ++     + ++S     +      +    I           +           
Sbjct: 953  CLGEIKCQNNATCIDGVESYKCECQPGFSGEFCDTKIQFCSPEFNPCANGAKCMDHFTHY 1012

Query: 94   FIEATFTINTQTLR--IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFA 151
              +     +       I +          +          +    +  +  E    +   
Sbjct: 1013 SCDCQAGFHGTNCTDNIDDCQNHMCQNGGTCVDGINDYQCRCPDDYTGKYCEGHNMISMM 1072

Query: 152  GDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191
                   Q H+C + + ++ +A  +  + +          
Sbjct: 1073 YPQTSPCQNHECKHGVCFQPNAQGSDYLCRCHPGYTGKWC 1112


>gi|198461203|ref|XP_001361946.2| GA21014 [Drosophila pseudoobscura pseudoobscura]
 gi|198137269|gb|EAL26525.2| GA21014 [Drosophila pseudoobscura pseudoobscura]
          Length = 1527

 Score = 38.2 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/160 (10%), Positives = 38/160 (23%), Gaps = 2/160 (1%)

Query: 34   CLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR 93
            CL ETK ++     + ++S     +      +    I           +           
Sbjct: 1036 CLGETKCQNNATCIDGVESYRCECQPGFSGEFCDTKIQFCSPEFNPCANGAKCVDHFTHY 1095

Query: 94   FIEATFTINTQTLR--IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFA 151
              E     +       I +          +          K    F  +  E    +   
Sbjct: 1096 SCECQAGFHGTNCTDNIDDCQNHMCQNGGTCIDGINDYVCKCPDDFTGKYCEGHNMISMM 1155

Query: 152  GDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191
                   Q H+C + + ++ +A  +  + +          
Sbjct: 1156 YPQTSPCQNHECKHGVCFQPNAAGSDYLCKCHPGYTGKWC 1195


>gi|307095198|gb|ADN29905.1| salivary inositol polyphosphate 5-phosphatase [Triatoma
           matogrossensis]
          Length = 316

 Score = 38.2 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 39/297 (13%), Positives = 73/297 (24%), Gaps = 56/297 (18%)

Query: 3   VVTVATWNVNSIR-ARIHNLAAWIKENN---PD--IICLQETKTEDKNFPF--------- 47
            + V TWNVN+ R   +  L   +++ +   PD  I+ LQE      +            
Sbjct: 30  TMHVVTWNVNAERPTCLVKLLGQLQQRDEDEPDMVIVGLQEVTMSLGSALKNYFLGDRWT 89

Query: 48  ----ETLQSLNY---------------HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDL 88
               + L+S +Y               +++     S   V +              G  +
Sbjct: 90  ASIEDILESNDYVKVETASMFGMLLNVYVKIQHSWSVADVDVAHVETDYFRYYGNKGGVI 149

Query: 89  DVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPL 148
                +      +N       +             ++   +            L      
Sbjct: 150 MKFRLYGRLFCIVNAH----FHALNKTTRFEDYKTFNKTRTEFCENPSDYIFFLGDLNFR 205

Query: 149 IFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFW 208
           I   +    PQ  +         +     E+    +K +       +       + Y   
Sbjct: 206 IRKTEKFNTPQKINKLIEAKKYEELLKQDELLYYQKKKEIFEDFTELPINFPPTYKYLLK 265

Query: 209 DYYADSWSKNKGIRIDHIMLSPEATSLLHS--------ARIDTKPRGWTKPSDHTPV 257
            Y       N   R       P  T  +            I+       + SDH PV
Sbjct: 266 RYK---RDYNLKRR-------PAWTDRILYKTETDRPITPINYDAMEDHRKSDHFPV 312


>gi|147773617|emb|CAN65417.1| hypothetical protein VITISV_026739 [Vitis vinifera]
          Length = 226

 Score = 38.2 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/26 (46%), Positives = 18/26 (69%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTED 42
           R   + A IK+N  D++CLQETK ++
Sbjct: 96  RRKVIKALIKKNMVDLVCLQETKIQE 121


>gi|38346596|emb|CAE04660.2| OSJNBa0061G20.16 [Oryza sativa Japonica Group]
          Length = 1285

 Score = 38.2 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 21/190 (11%), Positives = 54/190 (28%), Gaps = 11/190 (5%)

Query: 97  ATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI 156
                 +  ++  N          S+                  R  +   L      + 
Sbjct: 618 YWDESVSVDVKDINKRYIDAYVRLSSDEPQWHITFVYGEPRVENRHRMWSLLRTIRQSSA 677

Query: 157 IPQPH--DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADS 214
           +P     D    +                Q  ++  +   ++        +++ D   D 
Sbjct: 678 LPWMVIGDFNETLWQFEHFSKNPRCETQMQNFRDALYDCDLQDLGFKGVPHTY-DNRRDG 736

Query: 215 WSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDST 274
           W +N  +R+D  +   +   L   A++       +  SDH+P+++   + +  + +Q   
Sbjct: 737 W-RNVKVRLDRAVADDKWRDLFPEAQVSHLV---SPCSDHSPILLEFIVKDTTRPRQKCL 792

Query: 275 S----QNMKP 280
                   +P
Sbjct: 793 HYEIVWEREP 802


>gi|167627082|ref|YP_001677582.1| hypothetical protein Fphi_0858 [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|241667644|ref|ZP_04755222.1| hypothetical protein FphipA2_02660 [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254876189|ref|ZP_05248899.1| endonuclease/exonuclease/phosphatase [Francisella philomiragia
           subsp. philomiragia ATCC 25015]
 gi|167597083|gb|ABZ87081.1| endonuclease/exonuclease/phosphatase family [Francisella
           philomiragia subsp. philomiragia ATCC 25017]
 gi|254842210|gb|EET20624.1| endonuclease/exonuclease/phosphatase [Francisella philomiragia
           subsp. philomiragia ATCC 25015]
          Length = 239

 Score = 38.2 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 43/247 (17%), Positives = 77/247 (31%), Gaps = 48/247 (19%)

Query: 21  LAAWIK----ENNPDIICLQE-TKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75
             A+I+     +N DI CLQE     D  FP +    +N+      +    GVA +S + 
Sbjct: 32  FKAYIRHTYFNHNIDIFCLQEAVHQHDTKFPIDKF-DINFASNIVLRSHNYGVATVSHFP 90

Query: 76  PIEIVTHLPGDDLDVQARFIEATFTINTQT-LRIGNLYLPHGNPITSTKYDDKISWIKRF 134
            I+ V  L      V      +  T       ++  + +   N  ++  Y+ +   IK +
Sbjct: 91  VIKNVKILTTHRESVINTHKASLITHLNIDGTKVVVVNIHAINFKSNKVYEYEFEKIKEY 150

Query: 135 LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDA 194
           +     +  +           II    + +N    +    F  E       +       +
Sbjct: 151 ISPEKYKHPI-----------IIAGDFNTWNRRRVKLIKDFCREFSFKVAFIDEPQLVKS 199

Query: 195 IRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDH 254
            ++ H    LY             +G+              L  A +        K SDH
Sbjct: 200 FQSNHLDFVLY-------------RGL-------------NLEKASVLD----CKKISDH 229

Query: 255 TPVIVSL 261
            P+I   
Sbjct: 230 NPIIAEF 236


>gi|115694558|ref|XP_786460.2| PREDICTED: similar to ependymin-related protein precursor
          [Strongylocentrotus purpuratus]
 gi|115971257|ref|XP_001185599.1| PREDICTED: similar to ependymin-related protein precursor
          [Strongylocentrotus purpuratus]
          Length = 605

 Score = 38.2 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 1/38 (2%)

Query: 3  VVTVATWNVNSIR-ARIHNLAAWIKENNPDIICLQETK 39
          V+++ + N+  +  A+   LA      N DI+C+QET 
Sbjct: 48 VLSIISSNIEGLSGAKQELLADLCITTNCDILCIQETH 85


>gi|70932240|ref|XP_737670.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56513249|emb|CAH80745.1| hypothetical protein PC000205.04.0 [Plasmodium chabaudi chabaudi]
          Length = 148

 Score = 38.2 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 26/76 (34%), Gaps = 14/76 (18%)

Query: 195 IRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK---- 250
             A       Y+ W+        N    +D+I LSPE         +D    G  K    
Sbjct: 80  YSAYKKVDIPYTNWN-------NNFIDVLDYIFLSPELKVKRLLKGVDKHLFGQYKGIVT 132

Query: 251 ---PSDHTPVIVSLDI 263
              PSDH  +   +++
Sbjct: 133 PFNPSDHLSIAAEIEL 148


>gi|222616780|gb|EEE52912.1| hypothetical protein OsJ_35521 [Oryza sativa Japonica Group]
          Length = 1003

 Score = 38.2 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 44/135 (32%), Gaps = 8/135 (5%)

Query: 130 WIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR----QSFQK 185
              R      +    E   ++     I P     +  +   N+A +  E      +  ++
Sbjct: 176 MQWRCTFVYGEPKAHERHNMWTLLRRIKPNSTAPWCLMGDFNEAMWQFEHFSEHKRKEKQ 235

Query: 186 LQNMGFTDAIRATHDTHHLYSFWDYYADSWSK-NKGIRIDHIMLSPEATSLLHSARIDTK 244
           + +     +     D   + + W Y        N  +R+D  + S   + L   A++   
Sbjct: 236 MLDFREILSHCDVFDLGFIGTPWTYDNKRKGGYNVRVRLDRAVASQSWSVLYPQAQVRHL 295

Query: 245 PRGWTKPSDHTPVIV 259
                  SDH P++V
Sbjct: 296 VSSR---SDHCPILV 307


>gi|56697332|ref|YP_167698.1| endonuclease/exonuclease/phosphatase family protein [Ruegeria
           pomeroyi DSS-3]
 gi|56679069|gb|AAV95735.1| endonuclease/exonuclease/phosphatase family protein [Ruegeria
           pomeroyi DSS-3]
          Length = 233

 Score = 38.2 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 35/272 (12%), Positives = 68/272 (25%), Gaps = 60/272 (22%)

Query: 3   VVTVATWNVN---SI--RARIHNLAAWIKENNPDIICLQET--KTED--KNFPFETLQSL 53
            + +A++N+     +  R +   +   +      I  LQE   +        P   L+  
Sbjct: 5   TLRLASYNIQKCVGLDLRRQPRRILQVLDAMGARIAVLQEADKRLPPRPAALPHFVLEEA 64

Query: 54  NYHIETCGQKS----YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
            + +   G       +    I       ++ +             +   F      LR+ 
Sbjct: 65  GWQVVDLGGAGSLGWHGNAVIWKGAGITQLASAHHDLPGFEPRGAVRVEFDTPIGPLRVL 124

Query: 110 NLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW 169
            L+L                               ++ +  A D   +P     +     
Sbjct: 125 GLHLGL-----------------------LPASRRDQIVHLAHDLERLPPMPTVWAGDFN 161

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
           E        +      L+ +    +  A                         +D I  S
Sbjct: 162 EWS--RQPVLDHLAPMLRFLPARPSFPAPRPLGA-------------------LDRIAHS 200

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           PE +++ H        R     SDH PV   L
Sbjct: 201 PELSAVAHGVF---AERPAPIASDHLPVWADL 229


>gi|222629449|gb|EEE61581.1| hypothetical protein OsJ_15963 [Oryza sativa Japonica Group]
          Length = 1494

 Score = 38.2 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 22/163 (13%), Positives = 45/163 (27%), Gaps = 6/163 (3%)

Query: 101 INTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP 160
              ++L++        +        +   W   F+    +     E         +    
Sbjct: 317 FWDESLKVELKSYNMRHIDVIITEPEGARWTATFVYGEPKAQNRHEMWNLLRRIRLNASD 376

Query: 161 HDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF--WDYYAD-SWSK 217
                    E         R    + Q   F + +         +    W Y  + +   
Sbjct: 377 PWLMIGDFNEAMWQIEHRSRVKHSERQMRDFREVLVECDLQDIGFQGVPWTYDNNQASPN 436

Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
           N  +R+D  + SP   ++   A I       T  SDH P+++ 
Sbjct: 437 NVKVRLDRAVASPVWRAMFDQANIMH---LTTACSDHVPLLLE 476


>gi|17136482|ref|NP_476728.1| slit, isoform A [Drosophila melanogaster]
 gi|161077130|ref|NP_001097333.1| slit, isoform D [Drosophila melanogaster]
 gi|7303029|gb|AAF58098.1| slit, isoform A [Drosophila melanogaster]
 gi|157400353|gb|ABV53816.1| slit, isoform D [Drosophila melanogaster]
          Length = 1480

 Score = 38.2 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/160 (7%), Positives = 37/160 (23%), Gaps = 2/160 (1%)

Query: 34   CLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR 93
            CL E K ++     + ++S     +      +    I           +           
Sbjct: 989  CLGEIKCQNNATCIDGVESYKCECQPGFSGEFCDTKIQFCSPEFNPCANGAKCMDHFTHY 1048

Query: 94   FIEATFTINTQTLR--IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFA 151
              +     +       I +          +          +    +  +  E    +   
Sbjct: 1049 SCDCQAGFHGTNCTDNIDDCQNHMCQNGGTCVDGINDYQCRCPDDYTGKYCEGHNMISMM 1108

Query: 152  GDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191
                   Q H+C + + ++ +A  +  + +          
Sbjct: 1109 YPQTSPCQNHECKHGVCFQPNAQGSDYLCRCHPGYTGKWC 1148


>gi|86143416|ref|ZP_01061818.1| hypothetical protein MED217_09540 [Leeuwenhoekiella blandensis
           MED217]
 gi|85830321|gb|EAQ48781.1| hypothetical protein MED217_09540 [Leeuwenhoekiella blandensis
           MED217]
          Length = 193

 Score = 38.2 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 20/44 (45%), Gaps = 9/44 (20%)

Query: 221 IRIDHIMLSPEAT-SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +RID I+  PE       +  ++         SDH P++  L++
Sbjct: 158 LRIDFILTDPEFKTQAFQNFDVEY--------SDHFPIMAVLEL 193


>gi|312881196|ref|ZP_07740994.1| putative phospholipase C precursor [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309371088|gb|EFP98542.1| putative phospholipase C precursor [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 431

 Score = 38.2 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 40/280 (14%), Positives = 82/280 (29%), Gaps = 35/280 (12%)

Query: 4   VTVATWNVNSI---------RARIHNLAAWIKEN--NPDIICLQETK--TEDKNFPFETL 50
           + + T+N   +         RAR      +I E     D++ LQE      +    F   
Sbjct: 166 LRMMTYNTWMLPYIGQERDTRAR------YIAEAVKGYDVVFLQEVFDLGNEDTINFLMS 219

Query: 51  QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
           +   Y  E       N            ++T+             E     +    +   
Sbjct: 220 EEYVYRSEKLTANDSNTFDGG-------VLTYSKYPIEFQDQLVFEHCTGTDCSGDKGAV 272

Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170
               + +      ++  +          ++  +L E  +F     I              
Sbjct: 273 YTKINHSGKAYHLFNIHLGAWNGDQHRQTRMAQLGELRVFISAQQIAEHEPVIVGGDFNI 332

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY-SFWDYYADSWSKNKGIRIDHIML- 228
            D     E  Q   ++ +            +   Y + +    DS + ++  R+D+++L 
Sbjct: 333 -DREHYPEDFQQMLRILDAYDPGESSPFRYSSDPYLNHFSLNNDSTAIDR-ERLDYVLLL 390

Query: 229 -SPEATSLLHSA---RIDTKPR-GWTKPSDHTPVIVSLDI 263
            S      ++S    R+ T    G  + SDH  V   ++I
Sbjct: 391 KSTSPKRYINSVLPRRVFTSELWGKWELSDHFAVEALIEI 430


>gi|296876028|ref|ZP_06900084.1| endonuclease/exonuclease/phosphatase [Streptococcus parasanguinis
           ATCC 15912]
 gi|296432939|gb|EFH18730.1| endonuclease/exonuclease/phosphatase [Streptococcus parasanguinis
           ATCC 15912]
          Length = 770

 Score = 38.2 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 15/88 (17%), Positives = 30/88 (34%), Gaps = 10/88 (11%)

Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT--- 249
             +   HD    YS++ Y   +        +D+I +S    +      +           
Sbjct: 590 TNLMDQHDAGDRYSYF-YRGSNQV------LDNIFISNNMAAKARFEPVHINASFMKEHG 642

Query: 250 KPSDHTPVIVSLDIPEPRKKQQDSTSQN 277
           + SDH PV+V ++    +     +  Q 
Sbjct: 643 RASDHDPVLVQIEFSGAQTSGTPTDDQQ 670


>gi|289580690|ref|YP_003479156.1| endonuclease/exonuclease/phosphatase [Natrialba magadii ATCC 43099]
 gi|289530243|gb|ADD04594.1| Endonuclease/exonuclease/phosphatase [Natrialba magadii ATCC 43099]
          Length = 261

 Score = 38.2 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 18/45 (40%), Gaps = 8/45 (17%)

Query: 219 KGIR-IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
            G R +D    SP     +    +        + SDH P+++ LD
Sbjct: 223 VGSRSLDLFCCSPSLD--VGRCDVLD-----VQLSDHRPIVLELD 260


>gi|168061179|ref|XP_001782568.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162665975|gb|EDQ52643.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 617

 Score = 38.2 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTED-KNFPFETLQSLNY 55
           R  NL   I     DI+CLQE +++  ++F    L+   Y
Sbjct: 293 RRQNLLREIVAYRADILCLQEVQSDHYEDFYAVELEKHGY 332


>gi|119486376|ref|ZP_01620435.1| hypothetical protein L8106_17019 [Lyngbya sp. PCC 8106]
 gi|119456589|gb|EAW37719.1| hypothetical protein L8106_17019 [Lyngbya sp. PCC 8106]
          Length = 282

 Score = 38.2 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 19/47 (40%), Gaps = 5/47 (10%)

Query: 223 IDHIMLSPEATSLLHSARIDTKP-----RGWTKPSDHTPVIVSLDIP 264
           +D++ +S  A      + I         +     SDH P++ +  IP
Sbjct: 236 LDYVFVSQMAKKWPCESDILFVQNQVCQKEKEGFSDHYPLMANFSIP 282


>gi|163740897|ref|ZP_02148290.1| endonuclease/exonuclease/phosphatase family protein [Phaeobacter
           gallaeciensis 2.10]
 gi|161385888|gb|EDQ10264.1| endonuclease/exonuclease/phosphatase family protein [Phaeobacter
           gallaeciensis 2.10]
          Length = 339

 Score = 38.2 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 21/53 (39%), Gaps = 12/53 (22%)

Query: 223 IDHIMLSPEATSLLHSARI-----------DTKPR-GWTKPSDHTPVIVSLDI 263
           +D+IM+S        S RI           D   R      SDH PV + LD+
Sbjct: 286 LDYIMVSSGLRQPAASWRIWHPFEDAACYEDVALREALLAASDHFPVSLDLDL 338


>gi|17136484|ref|NP_476729.1| slit, isoform B [Drosophila melanogaster]
 gi|21645372|gb|AAM70966.1| slit, isoform B [Drosophila melanogaster]
          Length = 1469

 Score = 38.2 bits (87), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/160 (7%), Positives = 37/160 (23%), Gaps = 2/160 (1%)

Query: 34   CLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR 93
            CL E K ++     + ++S     +      +    I           +           
Sbjct: 989  CLGEIKCQNNATCIDGVESYKCECQPGFSGEFCDTKIQFCSPEFNPCANGAKCMDHFTHY 1048

Query: 94   FIEATFTINTQTLR--IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFA 151
              +     +       I +          +          +    +  +  E    +   
Sbjct: 1049 SCDCQAGFHGTNCTDNIDDCQNHMCQNGGTCVDGINDYQCRCPDDYTGKYCEGHNMISMM 1108

Query: 152  GDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191
                   Q H+C + + ++ +A  +  + +          
Sbjct: 1109 YPQTSPCQNHECKHGVCFQPNAQGSDYLCRCHPGYTGKWC 1148


>gi|147795054|emb|CAN60861.1| hypothetical protein VITISV_009889 [Vitis vinifera]
          Length = 1300

 Score = 38.2 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 20/41 (48%), Gaps = 2/41 (4%)

Query: 3   VVTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTE 41
           ++ + +WNV      ++   + A  +    D+ CL ETK +
Sbjct: 550 LLRLLSWNVRGANDSSKRKVIKAMXRNQKVDLFCLXETKIQ 590


>gi|126727467|ref|ZP_01743301.1| Endonuclease/exonuclease/phosphatase [Rhodobacterales bacterium
           HTCC2150]
 gi|126703247|gb|EBA02346.1| Endonuclease/exonuclease/phosphatase [Rhodobacterales bacterium
           HTCC2150]
          Length = 334

 Score = 38.2 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 21/53 (39%), Gaps = 12/53 (22%)

Query: 223 IDHIMLSPEATSLLHSARI-----DTKPRG-------WTKPSDHTPVIVSLDI 263
           +D+IM+S +      +  I     D    G           SDH PV + +DI
Sbjct: 282 LDYIMVSSDLKEKNPAWHIWHPFDDPACYGDLNLREALLAASDHFPVTLDIDI 334


>gi|166215964|sp|A2BHJ4|CNO6L_DANRE RecName: Full=CCR4-NOT transcription complex subunit 6-like
 gi|123230008|emb|CAM16193.1| novel protein similar to vertebrate (CCR4-NOT transcription
           complex, subunit 6-like) (CNOT6L) (zgc:111987) [Danio
           rerio]
          Length = 559

 Score = 38.2 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 22/56 (39%), Gaps = 5/56 (8%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKN---FPFETLQSLNYHIETCGQKSYNGVA 69
           R   +   I   + DII LQE   E +    F  ETL+   Y    C +     V+
Sbjct: 215 RKKGIMEEITNCDADIISLQEV--ETEQYYTFFLETLKDRGYDGFFCPKSRAKLVS 268


>gi|262047327|ref|ZP_06020284.1| metal-dependent hydrolase [Lactobacillus crispatus MV-3A-US]
 gi|312977126|ref|ZP_07788874.1| endonuclease/exonuclease/phosphatase family protein [Lactobacillus
           crispatus CTV-05]
 gi|260572301|gb|EEX28864.1| metal-dependent hydrolase [Lactobacillus crispatus MV-3A-US]
 gi|310895557|gb|EFQ44623.1| endonuclease/exonuclease/phosphatase family protein [Lactobacillus
           crispatus CTV-05]
          Length = 290

 Score = 38.2 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 33/267 (12%), Positives = 70/267 (26%), Gaps = 29/267 (10%)

Query: 19  HNLAAWIKENNPDIICLQE-------------TKTEDKNFPF-ETLQSLNYHIETCGQKS 64
           + +   +K+ NPD +  QE              K  + +FP  ++  + N+H        
Sbjct: 30  NGVIQTMKKQNPDCMFFQEIDTDSTRSFHVNQVKKVEDDFPKMDSTFASNFHSAFLAVPL 89

Query: 65  YNGVAILSKYQPIEIVTHLP--GDDLDVQARFIEATFTINTQTLRIGNLYLPHGN---PI 119
            N    +           +          +      F    +   +    + +G     I
Sbjct: 90  NNPHGTVRSGLLSMSKYKMDSAIRRKYPVSSGPIEKFVDLDRCFVVMRFPVTNGKDLVMI 149

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
            S           R  +       +E+     G+Y I+    +               E+
Sbjct: 150 NSHMSAYDKGGKMRKAQMKLISSVMEKEYR-RGNYVIVGGDFNHALGKDMMTHFEHQEEI 208

Query: 180 RQSFQKLQNMGFTDAIRAT--HDTHHLYSFWDYYADSWSKNKGIRI-DHIMLSPEATSLL 236
                 L               +  ++ +          K   + I D  ++S       
Sbjct: 209 PSWVSVLDQKMLPKDFTMIKAQNRENVATVRATDMKYDPKVNYMTICDGFIVSKNV--QA 266

Query: 237 HSARIDTKPRGWTKPSDHTPVIVSLDI 263
            +  I+T         DH PV +  ++
Sbjct: 267 KAYNINTHFEYA----DHNPVRLEFEL 289


>gi|241958458|ref|XP_002421948.1| polyprotein of l1-like non-ltr retrotransposon zorro 3, putative
           [Candida dubliniensis CD36]
 gi|223645293|emb|CAX39949.1| polyprotein of l1-like non-ltr retrotransposon zorro 3, putative
           [Candida dubliniensis CD36]
          Length = 1151

 Score = 38.2 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 28/235 (11%), Positives = 66/235 (28%), Gaps = 18/235 (7%)

Query: 18  IHNLAAWIKENN-PDIICLQETK-TEDKNFPF--ETLQSLNYHIETCGQKSYNGVAILSK 73
           +      I E++  DI  +QE +    + F +  + L+  N  +     +   G  I S 
Sbjct: 30  LDIFLKLIGEHSMIDIWFIQEVRFVSQEQFNYINKILKQHNAQLRMHHFEDLTGFLIHSP 89

Query: 74  Y---QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISW 130
           +   +                   I     I  + + + N YL  G+        +  + 
Sbjct: 90  HAKLKFKINDNDNHQTTHFEGCISILDIKLITNEDITLINNYLHSGDMDAQMTLLNAFTK 149

Query: 131 IKRF-LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNM 189
                 +  +  +            + +  P +  +    + ++     + +   K +  
Sbjct: 150 YIANLKKHNNHNIIYGSDFNHIMSLDDVQLPSNQNSYTFTKKESEIIQLMSRFHNKWKLQ 209

Query: 190 GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK 244
                      T+    F    +         R+D I +       L   R+ T+
Sbjct: 210 DAFQIFNNMRPTN----FHSNKSVKK------RLDRIYIDSRIRRKLKKYRLLTE 254


>gi|118592105|ref|ZP_01549499.1| hypothetical protein SIAM614_25552 [Stappia aggregata IAM 12614]
 gi|118435401|gb|EAV42048.1| hypothetical protein SIAM614_25552 [Stappia aggregata IAM 12614]
          Length = 323

 Score = 38.2 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 10/48 (20%)

Query: 4  VTVATWNVNS----------IRARIHNLAAWIKENNPDIICLQETKTE 41
          + +AT+N+ S          +  R+  L   I E   DI+CLQE   +
Sbjct: 1  MKLATFNMESFGEDRHDPDALTPRLDALRPKILELEADILCLQEVNAQ 48


>gi|308808454|ref|XP_003081537.1| Glucose-repressible alcohol dehydrogenase transcriptional effector
           CCR4 and related proteins (ISS) [Ostreococcus tauri]
 gi|116060002|emb|CAL56061.1| Glucose-repressible alcohol dehydrogenase transcriptional effector
           CCR4 and related proteins (ISS) [Ostreococcus tauri]
          Length = 572

 Score = 38.2 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 20/45 (44%), Gaps = 3/45 (6%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTE--DKNFPFETLQSLNYHIET 59
           R  N+   I   N DI+CLQE +++  ++ F  E      Y    
Sbjct: 246 RRQNILKEIVNYNADILCLQEVQSDHYEEFFQGEM-AKYGYASVY 289


>gi|145324102|ref|NP_001077640.1| endonuclease/exonuclease/phosphatase family protein [Arabidopsis
           thaliana]
 gi|215275244|sp|A8MS41|CCR4D_ARATH RecName: Full=Carbon catabolite repressor protein 4 homolog 4;
           Short=CCR4 homolog 4
 gi|332193244|gb|AEE31365.1| carbon catabolite repressor protein 4-like 4 [Arabidopsis thaliana]
          Length = 417

 Score = 38.2 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 19/52 (36%), Gaps = 13/52 (25%)

Query: 223 IDHIMLSPEATSLLHSARID-------TKPRGWT----KPSDHTPVIVSLDI 263
           +D+I +SP     +    I            G+      PSDH P+    +I
Sbjct: 365 LDYIFISPS--DFIKPVSILQLPEPDSPDVVGFLPNHHHPSDHLPIGAEFEI 414



 Score = 38.2 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 23/61 (37%), Gaps = 1/61 (1%)

Query: 15  RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKY 74
           +AR H + + +K    D  CLQE   E  +F    + SL Y      +         + +
Sbjct: 121 KARSHAILSVLKNLQADFFCLQEVD-EYDSFYRNNMDSLGYSGIYIQRTGQRKRDGCAIF 179

Query: 75  Q 75
            
Sbjct: 180 Y 180


>gi|12322547|gb|AAG51276.1|AC027135_17 hypothetical protein [Arabidopsis thaliana]
 gi|12597833|gb|AAG60143.1|AC074360_8 hypothetical protein [Arabidopsis thaliana]
          Length = 335

 Score = 38.2 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 19/52 (36%), Gaps = 13/52 (25%)

Query: 223 IDHIMLSPEATSLLHSARID-------TKPRGWT----KPSDHTPVIVSLDI 263
           +D+I +SP     +    I            G+      PSDH P+    +I
Sbjct: 283 LDYIFISPS--DFIKPVSILQLPEPDSPDVVGFLPNHHHPSDHLPIGAEFEI 332



 Score = 38.2 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 23/61 (37%), Gaps = 1/61 (1%)

Query: 15 RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKY 74
          +AR H + + +K    D  CLQE   E  +F    + SL Y      +         + +
Sbjct: 25 KARSHAILSVLKNLQADFFCLQEVD-EYDSFYRNNMDSLGYSGIYIQRTGQRKRDGCAIF 83

Query: 75 Q 75
           
Sbjct: 84 Y 84


>gi|79605875|ref|NP_973943.2| endonuclease/exonuclease/phosphatase family protein [Arabidopsis
           thaliana]
 gi|332193243|gb|AEE31364.1| carbon catabolite repressor protein 4-like 4 [Arabidopsis thaliana]
          Length = 358

 Score = 38.2 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 19/52 (36%), Gaps = 13/52 (25%)

Query: 223 IDHIMLSPEATSLLHSARID-------TKPRGWT----KPSDHTPVIVSLDI 263
           +D+I +SP     +    I            G+      PSDH P+    +I
Sbjct: 306 LDYIFISPS--DFIKPVSILQLPEPDSPDVVGFLPNHHHPSDHLPIGAEFEI 355



 Score = 38.2 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 23/61 (37%), Gaps = 1/61 (1%)

Query: 15  RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKY 74
           +AR H + + +K    D  CLQE   E  +F    + SL Y      +         + +
Sbjct: 62  KARSHAILSVLKNLQADFFCLQEVD-EYDSFYRNNMDSLGYSGIYIQRTGQRKRDGCAIF 120

Query: 75  Q 75
            
Sbjct: 121 Y 121


>gi|42562445|ref|NP_174435.2| endonuclease/exonuclease/phosphatase family protein [Arabidopsis
           thaliana]
 gi|332193241|gb|AEE31362.1| carbon catabolite repressor protein 4-like 4 [Arabidopsis thaliana]
          Length = 388

 Score = 38.2 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 19/52 (36%), Gaps = 13/52 (25%)

Query: 223 IDHIMLSPEATSLLHSARID-------TKPRGWT----KPSDHTPVIVSLDI 263
           +D+I +SP     +    I            G+      PSDH P+    +I
Sbjct: 336 LDYIFISPS--DFIKPVSILQLPEPDSPDVVGFLPNHHHPSDHLPIGAEFEI 385



 Score = 38.2 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 23/61 (37%), Gaps = 1/61 (1%)

Query: 15  RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKY 74
           +AR H + + +K    D  CLQE   E  +F    + SL Y      +         + +
Sbjct: 92  KARSHAILSVLKNLQADFFCLQEVD-EYDSFYRNNMDSLGYSGIYIQRTGQRKRDGCAIF 150

Query: 75  Q 75
            
Sbjct: 151 Y 151


>gi|228990178|ref|ZP_04150148.1| Endonuclease/exonuclease/phosphatase [Bacillus pseudomycoides DSM
           12442]
 gi|228769541|gb|EEM18134.1| Endonuclease/exonuclease/phosphatase [Bacillus pseudomycoides DSM
           12442]
          Length = 788

 Score = 38.2 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%)

Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +DHI+++              ++ I  +     + SDH PV+  +D+
Sbjct: 741 LDHILVTNNIAPHTVVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784


>gi|228996264|ref|ZP_04155909.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock3-17]
 gi|229003931|ref|ZP_04161737.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock1-4]
 gi|228757300|gb|EEM06539.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock1-4]
 gi|228763456|gb|EEM12358.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock3-17]
          Length = 788

 Score = 38.2 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%)

Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +DHI+++              ++ I  +     + SDH PV+  +D+
Sbjct: 741 LDHILVTNNIAPHTVVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784


>gi|229095675|ref|ZP_04226655.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-29]
 gi|228687708|gb|EEL41606.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-29]
          Length = 190

 Score = 38.2 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%)

Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +DHI+++              ++ I  +     + SDH PV+  +D+
Sbjct: 143 LDHILVTNNIAPHTVVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 186


>gi|229114626|ref|ZP_04244040.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock1-3]
 gi|228668691|gb|EEL24119.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock1-3]
          Length = 786

 Score = 38.2 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%)

Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +DHI+++              ++ I  +     + SDH PV+  +D+
Sbjct: 739 LDHILVTNNIAPHTVVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 782


>gi|218195351|gb|EEC77778.1| hypothetical protein OsI_16940 [Oryza sativa Indica Group]
          Length = 299

 Score = 38.2 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 20/37 (54%), Gaps = 5/37 (13%)

Query: 7  ATWNVNS-----IRARIHNLAAWIKENNPDIICLQET 38
           T+NV S     +  R+  + + ++++ PD+I  QE 
Sbjct: 1  MTYNVWSREDVAVYTRMKAIGSLVEKHKPDVIFFQEI 37


>gi|66472474|ref|NP_001018474.1| CCR4-NOT transcription complex subunit 6-like [Danio rerio]
 gi|63100861|gb|AAH95634.1| CCR4-NOT transcription complex, subunit 6-like [Danio rerio]
 gi|182890998|gb|AAI64274.1| Cnot6l protein [Danio rerio]
          Length = 559

 Score = 38.2 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 22/56 (39%), Gaps = 5/56 (8%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKN---FPFETLQSLNYHIETCGQKSYNGVA 69
           R   +   I   + DII LQE   E +    F  ETL+   Y    C +     V+
Sbjct: 215 RKKGIMEEITNCDADIISLQEV--ETEQYYTFFLETLKDRGYDGFFCPKSRAKLVS 268


>gi|147833952|emb|CAN64339.1| hypothetical protein VITISV_031562 [Vitis vinifera]
          Length = 1739

 Score = 38.2 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 8/27 (29%), Positives = 16/27 (59%)

Query: 13  SIRARIHNLAAWIKENNPDIICLQETK 39
             R +   +  +++  NPD++ +QETK
Sbjct: 605 GSRNKRRMVKDFLRSXNPDVVMIQETK 631


>gi|260777714|ref|ZP_05886607.1| hypothetical protein VIC_003111 [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260605727|gb|EEX32012.1| hypothetical protein VIC_003111 [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 296

 Score = 38.2 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 1/41 (2%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKP-SDHTPVIVSLD 262
           IDHI++SP  T+   +  +           SDH P+   L+
Sbjct: 256 IDHIIVSPGLTTAQTNQDVFPTSLVLQHHLSDHCPISTQLN 296


>gi|169787326|gb|ACA80102.1| putative DNA lyase [Colletotrichum nicholsonii]
          Length = 233

 Score = 38.2 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 22/56 (39%)

Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80
           +    DI+ +QETK + K+   + +    + +     K   G + ++ Y      
Sbjct: 2  FEILEADIVIMQETKIQRKDLHDDMVLVPGWDVFFSLPKHKKGYSGVAIYTRNATC 57


>gi|169787256|gb|ACA80067.1| putative DNA lyase [Colletotrichum nicholsonii]
 gi|169787264|gb|ACA80071.1| putative DNA lyase [Colletotrichum nicholsonii]
 gi|169787302|gb|ACA80090.1| putative DNA lyase [Colletotrichum nicholsonii]
 gi|169787310|gb|ACA80094.1| putative DNA lyase [Colletotrichum nicholsonii]
          Length = 233

 Score = 38.2 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 22/56 (39%)

Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80
           +    DI+ +QETK + K+   + +    + +     K   G + ++ Y      
Sbjct: 2  FEILEADIVIMQETKIQRKDLHDDMVLVPGWDVFFSLPKHKKGYSGVAIYTRNATC 57


>gi|169787200|gb|ACA80039.1| putative DNA lyase [Colletotrichum nicholsonii]
          Length = 233

 Score = 38.2 bits (87), Expect = 1.3,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 22/56 (39%)

Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80
           +    DI+ +QETK + K+   + +    + +     K   G + ++ Y      
Sbjct: 2  FEILEADIVIMQETKIQRKDLHDDMVLVPGWDVFFSLPKHKKGYSGVAIYTRNATC 57


>gi|229065513|ref|ZP_04200760.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH603]
 gi|228715763|gb|EEL67537.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH603]
          Length = 190

 Score = 38.2 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 22/47 (46%), Gaps = 9/47 (19%)

Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +DHI+++              ++ I  +     + SDH PV+V +D+
Sbjct: 143 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLVQIDL 186


>gi|229131979|ref|ZP_04260843.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST196]
 gi|228651483|gb|EEL07454.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST196]
          Length = 788

 Score = 38.2 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 22/47 (46%), Gaps = 9/47 (19%)

Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +DHI+++              ++ I  +     + SDH PV+V +D+
Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLVQIDL 784


>gi|229166011|ref|ZP_04293775.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH621]
 gi|228617422|gb|EEK74483.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH621]
          Length = 788

 Score = 38.2 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 22/47 (46%), Gaps = 9/47 (19%)

Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +DHI+++              ++ I  +     + SDH PV+V +D+
Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLVQIDL 784


>gi|159901673|ref|YP_001547919.1| signal transduction protein [Herpetosiphon aurantiacus ATCC 23779]
 gi|159894712|gb|ABX07791.1| putative signal transduction protein with Nacht domain
           [Herpetosiphon aurantiacus ATCC 23779]
          Length = 969

 Score = 38.2 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 20/184 (10%), Positives = 39/184 (21%), Gaps = 12/184 (6%)

Query: 36  QETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFI 95
           QET    + F  E      Y      Q+   G  I    +         G +   Q    
Sbjct: 678 QETTHLSQQFGREGTHYWRYMPAGQYQRGDAGTDIAETIEKHLGDFDPAGMNHRGQGDTQ 737

Query: 96  EATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGD-- 153
                +      IG   +         +     +         + +  +     +  +  
Sbjct: 738 IGDVGVVPHPYWIGQFMVTVEQYQAFIQAGGYHTDRWWSTHGKAWKTMIACSEPWWWEQQ 797

Query: 154 ----------YNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHH 203
                     Y +       Y   +            +     +    + A    H   H
Sbjct: 798 TLQQYINQPIYGVSWYEAVAYCNWLNHYLQPMLPVGYRVCVPSETEWMSAAYNDEHGQFH 857

Query: 204 LYSF 207
            YS+
Sbjct: 858 NYSW 861


>gi|90412320|ref|ZP_01220325.1| hypothetical protein P3TCK_09808 [Photobacterium profundum 3TCK]
 gi|90326811|gb|EAS43204.1| hypothetical protein P3TCK_09808 [Photobacterium profundum 3TCK]
          Length = 286

 Score = 38.2 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 32/247 (12%), Positives = 69/247 (27%), Gaps = 20/247 (8%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQP 76
           R   +++   E N DI  LQE    +    +      NY     G+              
Sbjct: 49  RKEIVSSIFSEQNIDIAGLQE--AFNDQIIYLARNLSNYGWVGVGRDDGKTKGEAVPIFY 106

Query: 77  IEIVT----HLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIK 132
                           +         +  +   +          +      ++     I 
Sbjct: 107 RADKYVKLGGGTFWLSETPEVVASVGWDADLTRITSWVRLEDKESSKRVLVFNAHFDHIG 166

Query: 133 RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192
           +  R  S +L  ++     GD       +D    +   N     +   ++   L N   +
Sbjct: 167 KVARQQSAKLLSKKAKEIIGD------DNDAVIVLGDLNFERSDVASYEALTSLFNDARS 220

Query: 193 DAIRATHDTHH-LYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP 251
             I+         Y++  Y+ +         ID+I ++ +    +++ +     +     
Sbjct: 221 TTIKPFEGIDGKEYTYHGYFKEPTED-----IDYIFVNDKL--RVNTFKYVNVIKDGIYS 273

Query: 252 SDHTPVI 258
           SDH  VI
Sbjct: 274 SDHLSVI 280


>gi|163938988|ref|YP_001643872.1| endonuclease/exonuclease/phosphatase [Bacillus weihenstephanensis
           KBAB4]
 gi|163861185|gb|ABY42244.1| Endonuclease/exonuclease/phosphatase [Bacillus weihenstephanensis
           KBAB4]
          Length = 788

 Score = 38.2 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 22/47 (46%), Gaps = 9/47 (19%)

Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +DHI+++              ++ I  +     + SDH PV+V +D+
Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLVQIDL 784


>gi|296411058|ref|XP_002835252.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295628027|emb|CAZ79373.1| unnamed protein product [Tuber melanosporum]
          Length = 431

 Score = 38.2 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 30/81 (37%), Gaps = 13/81 (16%)

Query: 200 DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
              H +++      SW+     RI + + S      +H      +     K SDH PV+ 
Sbjct: 303 PDDHSWNWAPLRWPSWTD----RILY-LPSENL--RVHKYTSIQEI----KSSDHRPVVA 351

Query: 260 SLDIPEPRKKQQDSTSQNMKP 280
            + IP   +    S    ++P
Sbjct: 352 HISIPA--EPLSASDGWRVRP 370


>gi|196230175|ref|ZP_03129038.1| Endonuclease/exonuclease/phosphatase [Chthoniobacter flavus
           Ellin428]
 gi|196225772|gb|EDY20279.1| Endonuclease/exonuclease/phosphatase [Chthoniobacter flavus
           Ellin428]
          Length = 379

 Score = 38.2 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 30/246 (12%), Positives = 57/246 (23%), Gaps = 33/246 (13%)

Query: 12  NS--IRAR--------IHNLAAWIKENNPDIICLQETKTEDKN----FPFETLQSLNYHI 57
           N   +RA              +++    PDII +Q+ K    +     P      L+   
Sbjct: 128 NGSELRAVTFNFGESNRPQFMSFLDAVKPDIILIQDAKGRGADLGRKIPGMYFSDLDQFA 187

Query: 58  ETCGQKSYNG--VAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
                       V     +       +         A +     T   Q  R        
Sbjct: 188 FLSKFPIQKAELVGGAKIHGEPVAARYEIQYQGRTIAIYSVHLPTPRQQLSRFLGGRHIL 247

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
           G+       +      + ++R           +  AG    +         +  + +   
Sbjct: 248 GDLAGHGHREAGYGDFRDWVRER---------MSLAGALAKVLAEEKEPMIVGGDFNTPD 298

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWD-YYADSWSKNKGIRIDHIMLSPEATS 234
              +   F       F    R    T   Y+     +   W     +RID+         
Sbjct: 299 HGYIYHIFAGEMTDCFARVGRGWGLTFPGYTHNPISFFGPW-----LRIDYFFTGKGW-- 351

Query: 235 LLHSAR 240
            +   R
Sbjct: 352 RVTECR 357


>gi|285017614|ref|YP_003375325.1| hypothetical protein XALc_0819 [Xanthomonas albilineans GPE PC73]
 gi|283472832|emb|CBA15337.1| conserved hypothetical protein [Xanthomonas albilineans]
          Length = 289

 Score = 38.2 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 29/273 (10%), Positives = 57/273 (20%), Gaps = 34/273 (12%)

Query: 4   VTVATWNVNSIRA------------RIHNLAAWIKENNPDIICLQE-TKTEDKNFPFETL 50
           + V ++NV   R             R   +A  I+  +PD+   QE  K +      + L
Sbjct: 36  LKVMSFNV---RVPIDTEGDKRWEVRRSAMAVLIRAQHPDLFGTQELIKRQADYLATK-L 91

Query: 51  QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
               +   +           +   +    +       L        +    +     +  
Sbjct: 92  PDYRWFGRSRDGNEDGERMGVFYDRHRLKLLASGDFWLSDTPEIPGSISWGHPLPRMVNW 151

Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170
                                    R   +    +   +       +P          + 
Sbjct: 152 GLFERIADGRRFYL----FDTHLPYREQDESARAKGAALILSRLRALPANVPVVLTGDFN 207

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230
                      +             +    T H ++               RID I+ + 
Sbjct: 208 TVQDSPTYRTLTRTLTDARTQVTQPQGPEATFHDFTGHPDR----------RIDWIL-TR 256

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
                               PSDH PVI     
Sbjct: 257 GL--HATRYATLDARPQGHWPSDHFPVIAEFAW 287


>gi|222152427|ref|YP_002561602.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           uberis 0140J]
 gi|222113238|emb|CAR40741.1| endonuclease/exonuclease/phosphatase family protein [Streptococcus
           uberis 0140J]
          Length = 273

 Score = 38.2 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 37/269 (13%), Positives = 69/269 (25%), Gaps = 16/269 (5%)

Query: 5   TVATWNVNSI---RARIHNLAAW---IKENNPDIICLQETK-------TEDKNFPFETLQ 51
              T N +S     A +  L      I     D+ICLQE          E+  F      
Sbjct: 3   KFLTLNTHSWMEANA-LKKLVDLAEHILAEKYDVICLQEINQLINSELAEEDFFYRPIPG 61

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
           +   H +       N +    ++       +  G D+  +   I +   I    + +  +
Sbjct: 62  TPALHKDNFALLLVNYLQKRGQHYYWSWAYNHIGYDIYHEGVAIFSKKPITATDILMSQV 121

Query: 112 YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
              H                K     +       +                    +I  +
Sbjct: 122 DDEHDYHTRRALLAKTEIDGKETALVSLHMSWFGKGFEGEWTTLETELNALGIPLMIMGD 181

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
               T        +   +G  D+ +        YS            +  ++DH   S E
Sbjct: 182 FNNPTDLEGYQLIEASPLGLRDSHKVADKVFGDYSIVADIDGWKDNKESYKVDHAFASKE 241

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
               +  + I  +       SDH  + V+
Sbjct: 242 FD--ILRSEITFEGGSAPVISDHFGLEVT 268


>gi|83942866|ref|ZP_00955326.1| endonuclease/exonuclease/phosphatase family protein [Sulfitobacter
           sp. EE-36]
 gi|83845874|gb|EAP83751.1| endonuclease/exonuclease/phosphatase family protein [Sulfitobacter
           sp. EE-36]
          Length = 341

 Score = 38.2 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 12/53 (22%)

Query: 223 IDHIMLSPEATSLLHSARI---DTKPRGW---------TKPSDHTPVIVSLDI 263
           +D+IM+SP  T+     RI      P  W            SDH PV + LD+
Sbjct: 285 LDYIMISPALTAHRPHWRIWHPLDDPECWGDAALRDALITASDHFPVTIDLDL 337


>gi|290989101|ref|XP_002677183.1| predicted protein [Naegleria gruberi]
 gi|284090789|gb|EFC44439.1| predicted protein [Naegleria gruberi]
          Length = 422

 Score = 38.2 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 3/51 (5%)

Query: 17  RIHNLAAWIKENNPDIICLQET-KTEDKNFPFETLQSLNYHIETCGQKSYN 66
           R  NL   I+  N DIICLQE  K E+  F  + L+ L Y      Q + +
Sbjct: 54  RRENLLNEIEFYNSDIICLQEVDKYEE--FWKDKLKELGYSSFYHAQYNPS 102


>gi|114765835|ref|ZP_01444928.1| metal-dependent hydrolase [Pelagibaca bermudensis HTCC2601]
 gi|114541834|gb|EAU44871.1| metal-dependent hydrolase [Roseovarius sp. HTCC2601]
          Length = 223

 Score = 38.2 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 18/42 (42%), Gaps = 11/42 (26%)

Query: 4  VTVATWNVNSIRARIH--------NLAAWIKENNPDIICLQE 37
          + +A++N   IR  +          +   + + + D + LQE
Sbjct: 1  MKIASYN---IRKALGTDRRRDPARILKVLNQIDADAVLLQE 39


>gi|238508578|ref|XP_002385478.1| reverse transcriptase, putative [Aspergillus flavus NRRL3357]
 gi|220688370|gb|EED44723.1| reverse transcriptase, putative [Aspergillus flavus NRRL3357]
          Length = 1312

 Score = 38.2 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 35/272 (12%), Positives = 67/272 (24%), Gaps = 31/272 (11%)

Query: 21  LAAWIKE---NNPDIICLQETKTEDKNFP-FETLQSLNYHIETCGQKSYNGVAILSKYQP 76
           +A ++++      DII +QE        P         +H      +     A  +  Q 
Sbjct: 1   MAQFLRDPEVRQADIIAIQE--------PWRNPYSDTTHHPAFGSHQLLYPTADDTGGQR 52

Query: 77  IEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
             +  ++         +    +       L +    L   N      +D   +     + 
Sbjct: 53  ARVALYISRKINPRTWKHTVHSADCQELELHVHGRRLRIFNIYNPGPWD---TGRTDTVD 109

Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIR 196
                +      I  GD+N+        +     +D     E   +     +       R
Sbjct: 110 LLDHVVPERGDHIVLGDFNLHHPAWSERDAH---DDPAAAGETTTTNDDTDDTSRDRQTR 166

Query: 197 ATHDTHHLYSFWDYYADS-W---------SKNKGIRIDHIMLSPEATSLLHSARIDTKPR 246
                  L  F D      W           N    ID +  +        +  +  K  
Sbjct: 167 TDRKAPQLLEFADSRLLDLWLEPGTVTRDQNNHRSTIDLVFGAQSLADQYIACEVAPKVH 226

Query: 247 GWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278
                SDH P+   LD+     +         
Sbjct: 227 TD---SDHLPIRTILDLAPHAYQPPKRRQWKA 255


>gi|223944849|gb|ACN26508.1| unknown [Zea mays]
          Length = 282

 Score = 38.2 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 29/241 (12%), Positives = 57/241 (23%), Gaps = 32/241 (13%)

Query: 29  NPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDL 88
           +PD++CLQE   +        ++S  Y      +                          
Sbjct: 43  DPDVVCLQEV--DRFQDIAAGMKSRGYEGIFQRRTGDTRDGCA------------IFWKS 88

Query: 89  DVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPL 148
                  E +   +   LR     +       + K+      +    +    +L    P 
Sbjct: 89  KQLHLVEEDSIDFSEFNLRNNVAQICVFELNGTHKFVLGNIHVLFNPKRGDVKLGQTYPD 148

Query: 149 IFAGDYNIIPQPHDCYNPIIWEN-DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF 207
           I            +  N   + N           S   +      +           Y  
Sbjct: 149 ISHSLLKYQWTDEEVRNATGYSNVMVAEHPLKLSSSYAMLKGNSNNRGLHGEPLATSYH- 207

Query: 208 WDYYADSWSKNKGIRIDHIMLSPEAT-SLLHS---ARIDTKPRG---WTKPSDHTPVIVS 260
                    K  G  +D++  +     S +       +  + RG       SDH P++  
Sbjct: 208 --------RKFLGT-VDYLWHTHGIECSRVLDTLPISVLKRTRGLPTREIGSDHLPIVAE 258

Query: 261 L 261
            
Sbjct: 259 F 259


>gi|222612692|gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
          Length = 1594

 Score = 38.2 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 20/136 (14%), Positives = 43/136 (31%), Gaps = 13/136 (9%)

Query: 134 FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW-----ENDACFTLEVRQSFQKLQN 188
            L   +                  P                    C  ++ + +  + ++
Sbjct: 398 CLYGDAHSETKHRTWTTMRGLIDNPTTPWLMAGDFNEILFSHEKQCGRMKAQSAMDEFRH 457

Query: 189 MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR--IDHIMLSPEATSLLHSARIDTKPR 246
                 +         +++      S S+   IR  +D  + +PE  ++  +AR+     
Sbjct: 458 ALTDCGLDDLGFEGDAFTW---RNHSHSQEGYIREWLDRAVANPEWRAMFPAARVIN--- 511

Query: 247 GWTKPSDHTPVIVSLD 262
           G  + SDH PVI+ L+
Sbjct: 512 GDPRHSDHRPVIIELE 527


>gi|227204495|dbj|BAH57099.1| AT1G31500 [Arabidopsis thaliana]
          Length = 222

 Score = 38.2 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 23/61 (37%), Gaps = 1/61 (1%)

Query: 15  RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKY 74
           +AR H + + +K    D  CLQE   E  +F    + SL Y      +         + +
Sbjct: 92  KARSHAILSVLKNLQADFFCLQEVD-EYDSFYRNNMDSLGYSGIYIQRTGQRKRDGCAIF 150

Query: 75  Q 75
            
Sbjct: 151 Y 151


>gi|168002952|ref|XP_001754177.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162694731|gb|EDQ81078.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 331

 Score = 38.2 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 9/52 (17%), Positives = 18/52 (34%), Gaps = 18/52 (34%)

Query: 5  TVATWN------VNSI------------RARIHNLAAWIKENNPDIICLQET 38
           + ++N      V  I            + R   +   +   + D++CLQE 
Sbjct: 1  RIVSYNILAQSYVKGISFPHSPSPCLRWKNRSKAVLERLLSFDADVLCLQEL 52


>gi|42571707|ref|NP_973944.1| endonuclease/exonuclease/phosphatase family protein [Arabidopsis
           thaliana]
 gi|332193242|gb|AEE31363.1| carbon catabolite repressor protein 4-like 4 [Arabidopsis thaliana]
          Length = 283

 Score = 38.2 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 23/61 (37%), Gaps = 1/61 (1%)

Query: 15  RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKY 74
           +AR H + + +K    D  CLQE   E  +F    + SL Y      +         + +
Sbjct: 87  KARSHAILSVLKNLQADFFCLQEVD-EYDSFYRNNMDSLGYSGIYIQRTGQRKRDGCAIF 145

Query: 75  Q 75
            
Sbjct: 146 Y 146


>gi|308478231|ref|XP_003101327.1| hypothetical protein CRE_13469 [Caenorhabditis remanei]
 gi|308263228|gb|EFP07181.1| hypothetical protein CRE_13469 [Caenorhabditis remanei]
          Length = 1815

 Score = 38.2 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/167 (8%), Positives = 29/167 (17%), Gaps = 5/167 (2%)

Query: 58   ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
             +     ++ V  +   Q  E   +L                  N + +      +  G 
Sbjct: 1059 VSGQCPCHDNVIGMQCDQCAENHFNLASGAGCEACGCDPNGVVPNHEGVPHLQCNIFDGQ 1118

Query: 118  PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
                     +       L +                    P                   
Sbjct: 1119 CQCKPGRGGRKCDQCEDLYWGDPTTPDGCH-----RCECNPTGSKSLQCHRNNGTCECQP 1173

Query: 178  EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRID 224
                +       G+T      +     +  WD       K     ID
Sbjct: 1174 GSGGALCNECARGYTGQWPYCNPCGECFHQWDNIMQKLQKQVHALID 1220


>gi|149247002|ref|XP_001527926.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146447880|gb|EDK42268.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 299

 Score = 38.2 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 2/41 (4%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           ID I  S     +L    I     G    SDH PVI  ++I
Sbjct: 261 IDFIWTSQNI-PILQHCTISQDCCGCL-CSDHRPVIAIIEI 299


>gi|68077019|ref|XP_680429.1| hypothetical protein [Plasmodium berghei strain ANKA]
 gi|56501361|emb|CAH96637.1| conserved hypothetical protein [Plasmodium berghei]
          Length = 633

 Score = 38.2 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 30/240 (12%), Positives = 63/240 (26%), Gaps = 23/240 (9%)

Query: 31  DIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDV 90
           DI      K  D     E ++ +   +   G   +N    +       +  H     + V
Sbjct: 410 DIF----IKLSDDL--DEIIKEIK-TVYQIGIFMHNTSQNIFIIANTHLYFHSLAQHIRV 462

Query: 91  QARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIF 150
              +         +              I +  ++                +E  +    
Sbjct: 463 IQVYCILHILEKIKNKYKNKYKNKEIYVILNGDFNTNFESEVFSFVQGDDIMENSKLWEN 522

Query: 151 AGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDY 210
           +  +       + Y  +    +     ++   +   +N  F     A       Y+ W+ 
Sbjct: 523 SKLFKKEYDDLNKYPTLFNIENNSNDQKINGLYLNRKN--FLPLYSAYKKVDIPYTNWN- 579

Query: 211 YADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTK-------PSDHTPVIVSLDI 263
                  N    +D+I LSPE         +D       K       PSDH  +   +++
Sbjct: 580 ------NNFIDVLDYIFLSPELKVKRVLKGMDKHLFDQYKGVVSPFNPSDHLSIAAEIEL 633


>gi|83951017|ref|ZP_00959750.1| hypothetical protein ISM_07945 [Roseovarius nubinhibens ISM]
 gi|83838916|gb|EAP78212.1| hypothetical protein ISM_07945 [Roseovarius nubinhibens ISM]
          Length = 341

 Score = 38.2 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 14/48 (29%)

Query: 3  VVTVATWNV----NS-------IR---ARIHNLAAWIKENNPDIICLQ 36
           + +ATWNV             +R   A+   +A  I ++ PDI+ LQ
Sbjct: 12 TLRLATWNVELSRAGPGILLRDLRRGDAQADAVAEIIADHAPDILLLQ 59


>gi|116793209|gb|ABK26655.1| unknown [Picea sitchensis]
          Length = 322

 Score = 38.2 bits (87), Expect = 1.4,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 7/39 (17%)

Query: 6   VATWNVNSIR------ARIHNLAAWIKENNPDIICLQET 38
             T+NV   R      AR+  L   I+++ P  IC QE 
Sbjct: 81  FLTYNVW-FREDLEVHARMKALGDLIEQHQPHFICFQEV 118


>gi|307103760|gb|EFN52018.1| hypothetical protein CHLNCDRAFT_139582 [Chlorella variabilis]
          Length = 632

 Score = 38.2 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/150 (11%), Positives = 34/150 (22%), Gaps = 7/150 (4%)

Query: 20  NLAAWIKENNPDIICLQE-TKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIE 78
            +  W+KE NPD++ L E     D     E     ++H      +  + V          
Sbjct: 288 QILEWVKEVNPDVVFLFENVDLSDHQ---EPAIREDWHTVKRMLRCRHAVDTAWHRAAGP 344

Query: 79  IVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFL--- 135
                P           +A        +R           +                   
Sbjct: 345 PHACTPAPCFQPNVLIFDAALVSPAHRVRAYWEDRDLATALHPCHRPKLSPTTDNPRIFA 404

Query: 136 RFASQRLELEEPLIFAGDYNIIPQPHDCYN 165
            F  +   + +       +      ++  N
Sbjct: 405 HFNKKGQPMRKYPTVCRTWQAEHGAYNLAN 434


>gi|290581317|ref|YP_003485709.1| hypothetical protein SmuNN2025_1791 [Streptococcus mutans NN2025]
 gi|254998216|dbj|BAH88817.1| hypothetical protein SMU.2046c [Streptococcus mutans NN2025]
          Length = 280

 Score = 38.2 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 33/270 (12%), Positives = 85/270 (31%), Gaps = 22/270 (8%)

Query: 2   SVVTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56
           ++V + T N +S      + ++  L   I EN+ D+IC+QE    ++    E  + L  +
Sbjct: 7   TMVKLLTINSHSWMEEDPQKKLEILGKTILENDYDVICVQEV---NQLLHSEPAKDLPNY 63

Query: 57  IET-----CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNL 111
            +        + +Y    +    +   +       +     RF E    ++   L    +
Sbjct: 64  CQVAGTPAIHKDNYALQLVTFLLEQERVYYWSWAYNHIGYDRFQEGVAILSKTPLVSQGI 123

Query: 112 YLPHGNPITSTKYDD-----KISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
            +   +   +               +     +       +      +  +     +   P
Sbjct: 124 LISDVDDEHNYHTRRALLGKTKIDQEDIAIVSLHMSWWNKGFQGEWN-KLERALSNLKLP 182

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK-GIRIDH 225
           ++   D     E       L++         +    +  +      D W  N+  +++D+
Sbjct: 183 LLLMGDFNNPYENEGYQAILKSSLKLQDSHQSAKITYGKATIQKEIDGWQGNQEALKVDY 242

Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHT 255
           + LS +    +  + +    + +   SDH 
Sbjct: 243 VFLSSDW--QVEKSEVIFDGKHYPMISDHC 270


>gi|260825207|ref|XP_002607558.1| hypothetical protein BRAFLDRAFT_119718 [Branchiostoma floridae]
 gi|229292906|gb|EEN63568.1| hypothetical protein BRAFLDRAFT_119718 [Branchiostoma floridae]
          Length = 1216

 Score = 38.2 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 18/165 (10%), Positives = 36/165 (21%), Gaps = 10/165 (6%)

Query: 55  YHIETCGQKSYNGVAILS-KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
           YH+        +  A  +  +  I ++   P     V  +            L++     
Sbjct: 235 YHMNPRQWDHVSEQACCTNCWCCIVVLQMNPRQWDHVSEQACCTNCWCCIVVLQMNPRQW 294

Query: 114 PHGN----PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC-----Y 164
            H +              +    R     S++              + P+  D       
Sbjct: 295 DHVSEQACCTNCWCCIVVLQMNPRQWDHVSEQACCTNCWCCIVVLQMNPRQWDHVSEQAC 354

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWD 209
               W       +  RQ     +    T+              WD
Sbjct: 355 CTNCWCCIVILQMNPRQWDHVSEQACCTNCWCCIVVLQMNPRQWD 399



 Score = 35.5 bits (80), Expect = 7.9,   Method: Composition-based stats.
 Identities = 11/159 (6%), Positives = 25/159 (15%), Gaps = 5/159 (3%)

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
             +   +++                                    +     R  +     
Sbjct: 267 QWDHVSEQACCTNCWCCIVVLQMNPRQWDHVSEQACCTNCWCCIVVLQMNPRQWDHVSEQ 326

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC-----YNPIIWE 170
                       +    R     S++              + P+  D           W 
Sbjct: 327 ACCTNCWCCIVVLQMNPRQWDHVSEQACCTNCWCCIVILQMNPRQWDHVSEQACCTNCWC 386

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWD 209
                 +  RQ     +    T+              WD
Sbjct: 387 CIVVLQMNPRQWDHVSEQACCTNCWCCIVVLQMNPRQWD 425


>gi|115694560|ref|XP_001182170.1| PREDICTED: similar to bucentaur [Strongylocentrotus purpuratus]
 gi|115971255|ref|XP_001185554.1| PREDICTED: similar to bucentaur [Strongylocentrotus purpuratus]
          Length = 318

 Score = 38.2 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 15/93 (16%), Positives = 32/93 (34%), Gaps = 8/93 (8%)

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
             + N          H    L+++      + ++     ID+IM+     + L + +   
Sbjct: 220 FCVANSFIIGNTWFEHHPRRLWTWMGPGDRARTQ-----IDYIMVKKRWRTSLQNVKTRP 274

Query: 244 KPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQ 276
              G    SDH  ++  L +    KK   + + 
Sbjct: 275 ---GADCGSDHQLLVAKLRLRIKAKKCDSAPTW 304


>gi|315178934|gb|ADT85848.1| extracellular nuclease-related protein [Vibrio furnissii NCTC
           11218]
          Length = 877

 Score = 38.2 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 27/77 (35%), Gaps = 26/77 (33%)

Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT------------------ 249
           W Y   S++   G  +DH+++S      +  A  D    G                    
Sbjct: 777 WSY---SYNDEVGA-LDHLLVSDSLKLRVVDAM-DWHINGGESTLFDYNDEYKGDLPKYA 831

Query: 250 ---KPSDHTPVIVSLDI 263
              + SDH P +V L+I
Sbjct: 832 DHFRASDHDPAVVELNI 848


>gi|260770890|ref|ZP_05879819.1| extracellular nuclease-related protein [Vibrio furnissii CIP
           102972]
 gi|260614127|gb|EEX39317.1| extracellular nuclease-related protein [Vibrio furnissii CIP
           102972]
          Length = 877

 Score = 38.2 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 27/77 (35%), Gaps = 26/77 (33%)

Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT------------------ 249
           W Y   S++   G  +DH+++S      +  A  D    G                    
Sbjct: 777 WSY---SYNDEVGA-LDHLLVSDSLKLRVVDAM-DWHINGGESTLFDYNDEYKGDLPKYA 831

Query: 250 ---KPSDHTPVIVSLDI 263
              + SDH P +V L+I
Sbjct: 832 DHFRASDHDPAVVELNI 848


>gi|294954722|ref|XP_002788286.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239903549|gb|EER20082.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 1104

 Score = 38.2 bits (87), Expect = 1.5,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 42/137 (30%), Gaps = 13/137 (9%)

Query: 130 WIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNM 189
               F     + + LE P I  GD+N         +PI     A    E   +  +L  +
Sbjct: 118 QKDEFWDVVEEVVRLERPEIVCGDFNARLGSDLARDPIHGLGKAYAYEETNDNGWRLVML 177

Query: 190 GF-----TDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK 244
                    A        HL ++       W +     +DH ++       +   R+   
Sbjct: 178 AAASHMGHAATHFLKPQTHLGTWLSPVEKCWHQ-----LDHFLIWSNRKLQVLDVRVRRT 232

Query: 245 PRGWTKPSDHTPVIVSL 261
             G    SDH  + +S 
Sbjct: 233 VMGS---SDHCALELSF 246


>gi|242209337|ref|XP_002470516.1| predicted protein [Postia placenta Mad-698-R]
 gi|220730426|gb|EED84283.1| predicted protein [Postia placenta Mad-698-R]
          Length = 1315

 Score = 37.8 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 23/70 (32%), Gaps = 19/70 (27%)

Query: 200  DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRG------WTKPSD 253
                 Y++  Y   +        IDHI +SP   +    A ++             + SD
Sbjct: 1228 PPAERYTYV-YDQHAQE------IDHIFVSPAIAAR--GADVEHVHMNTWAQTMGERASD 1278

Query: 254  HTP----VIV 259
            H P    V V
Sbjct: 1279 HDPSVARVWV 1288


>gi|302695395|ref|XP_003037376.1| hypothetical protein SCHCODRAFT_48185 [Schizophyllum commune H4-8]
 gi|300111073|gb|EFJ02474.1| hypothetical protein SCHCODRAFT_48185 [Schizophyllum commune H4-8]
          Length = 429

 Score = 37.8 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 47/308 (15%), Positives = 82/308 (26%), Gaps = 36/308 (11%)

Query: 4   VTVATWNVNSI-------RARIHNLAAWIKENNPDIICLQET---------------KTE 41
           + V + N   +       R R+  +AA +     D+ICLQE                +  
Sbjct: 8   LRVFSLNCWGLKFVSKDRRERVDAIAAALANAEYDVICLQEIWVFSDYERVRDAAAARLP 67

Query: 42  DKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI 101
              F +         I +        V   S       V           A        +
Sbjct: 68  HSKFYYSGALGAGLAILSRYPIVATAVHPYSLNGAPIDVGAGDWFVGKAAASATLLHPRL 127

Query: 102 NTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161
               +   +L+   G          ++       + A Q  EL   +I AGD+N IP   
Sbjct: 128 GLVQVFNTHLFAKGGEDGPEYNRAHRLVNAWEIAKLARQSAELGRYVIAAGDFNSIPTTL 187

Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL---YS-FWDYYADSWSK 217
                               +             R           YS      + + + 
Sbjct: 188 PMEVIRDHAALTDAWAITHANPGAGAASPLEALSRFGVTADSPLNTYSAGKPLDSHARA- 246

Query: 218 NKGIRIDHIM------LSPEATSLLHSARI---DTKPRGWTKPSDHTPVIVSLDIPEPRK 268
           + G R+D+++        P         R+   D  P      SDH  V  + +I +P +
Sbjct: 247 HWGKRLDYVLYRQPVRAGPHPRLKATQCRVVLTDLVPGRAFSYSDHFGVETTFEIGDPEE 306

Query: 269 KQQDSTSQ 276
                 ++
Sbjct: 307 LPAPLPTE 314


>gi|255557747|ref|XP_002519903.1| RNA exonuclease NGL1, putative [Ricinus communis]
 gi|223540949|gb|EEF42507.1| RNA exonuclease NGL1, putative [Ricinus communis]
          Length = 443

 Score = 37.8 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 22/64 (34%), Gaps = 1/64 (1%)

Query: 15  RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKY 74
           ++R   +   +K    D +CLQE   E  +F  + ++   Y      +           Y
Sbjct: 135 KSRSKAILTILKNLEADFLCLQEVD-EYDSFYKQNMEIHGYSSIYIQRSGQKRDGCGIFY 193

Query: 75  QPIE 78
           +   
Sbjct: 194 KHDC 197


>gi|219116713|ref|XP_002179151.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217409042|gb|EEC48974.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 765

 Score = 37.8 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 9/54 (16%)

Query: 219 KGIR--IDHIMLSPEA-------TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +G R  +DHI++SP+           +     DT       PSDH  +I  +D+
Sbjct: 705 RGFRGTLDHILVSPDLIPLKSGPMPSMRDVTRDTAMPSERIPSDHVSLICEVDM 758



 Score = 36.7 bits (83), Expect = 4.3,   Method: Composition-based stats.
 Identities = 7/22 (31%), Positives = 12/22 (54%)

Query: 17  RIHNLAAWIKENNPDIICLQET 38
           R+  +   I  +  D++CLQE 
Sbjct: 445 RLPLILHEILAHQADVVCLQEV 466


>gi|187940074|gb|ACD39207.1| hypothetical protein PACL_0419 [Pseudomonas aeruginosa]
          Length = 368

 Score = 37.8 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 8/46 (17%)

Query: 224 DHIMLSPEATSLLHSARIDTKPR--GW------TKPSDHTPVIVSL 261
           D+I +S      L +A I   PR  GW         SDH PV V+L
Sbjct: 226 DNIWVSRTHRLKLDNAGIMDYPRMIGWSHEKSRKHVSDHAPVFVTL 271


>gi|218902274|ref|YP_002450108.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus AH820]
 gi|218539755|gb|ACK92153.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus AH820]
          Length = 788

 Score = 37.8 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 22/44 (50%), Gaps = 3/44 (6%)

Query: 223 IDHIMLSPEATSL--LHSARIDTKPRGWT-KPSDHTPVIVSLDI 263
           +DHI+++        +    ++T       + SDH PV+V +D+
Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNTNIMKEHGRVSDHDPVLVQIDL 784


>gi|68063165|ref|XP_673592.1| hypothetical protein [Plasmodium berghei strain ANKA]
 gi|56491555|emb|CAI03741.1| hypothetical protein PB405569.00.0 [Plasmodium berghei]
          Length = 90

 Score = 37.8 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 19/41 (46%), Gaps = 8/41 (19%)

Query: 4  VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKN 44
          + +  +N+            W+ + +P   CLQET+  DK+
Sbjct: 3  MKI--FNLKG------QQTDWLHKQDPTFCCLQETRLRDKD 35


>gi|323453471|gb|EGB09342.1| hypothetical protein AURANDRAFT_62900 [Aureococcus anophagefferens]
          Length = 393

 Score = 37.8 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 11/56 (19%)

Query: 223 IDHIMLSPEA----TSLLHSARIDTKPRGW-------TKPSDHTPVIVSLDIPEPR 267
           ID I++S  A    T+ +  A + TK              SDH PV V  ++   +
Sbjct: 338 IDWILVSSPAFVEGTAAVLDAEVHTKQCAAWSAYNHTRYGSDHYPVSVDFELHPNQ 393


>gi|119489711|ref|ZP_01622470.1| hypothetical protein L8106_13340 [Lyngbya sp. PCC 8106]
 gi|119454448|gb|EAW35597.1| hypothetical protein L8106_13340 [Lyngbya sp. PCC 8106]
          Length = 273

 Score = 37.8 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 12/78 (15%), Positives = 25/78 (32%), Gaps = 11/78 (14%)

Query: 191 FTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT----KPR 246
                        + +      D+        +D + +S +      S++I         
Sbjct: 199 ENQVWTWVRPQEIIATHCSSRYDTV-------LDFVFISSQIQPRSASSKILYPEADYCP 251

Query: 247 GWTKPSDHTPVIVSLDIP 264
             ++ SDH PV  +L +P
Sbjct: 252 DTSQKSDHRPVQATLSLP 269


>gi|328876892|gb|EGG25255.1| inositol 5-phosphatase [Dictyostelium fasciculatum]
          Length = 1338

 Score = 37.8 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 55/212 (25%), Gaps = 19/212 (8%)

Query: 8   TWNVNSIRARIHNLAAWI--KENNPD--IICLQE---------TKTEDKNFPFETLQSLN 54
           +WN N  R+   NLA W+      PD  +I LQE          K    +      +   
Sbjct: 426 SWNCNGKRS--TNLANWLLCNNFAPDVVVIGLQEIVDMKASSIVKATAAD--KNNNKENA 481

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           YH      +    ++         +   L G  L V  +   A F       ++    + 
Sbjct: 482 YHPWKHDIEQTLSLSTGGTKYVKVMSKVLVGIMLLVYVKEEHAPFVEEKHGQKVACGAMG 541

Query: 115 HGNP--ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
            GN   +       K  +       A+                I     D +   +    
Sbjct: 542 IGNKGGVGIRFQIYKTGFCFINTHMAAGPSHERMERREKDFKKIQMMSFDNHLSPLDHEC 601

Query: 173 ACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL 204
             +  ++       QN            T H 
Sbjct: 602 LIWCGDLNYRIDLGQNEAKQLIFNKQWQTLHA 633


>gi|281351904|gb|EFB27488.1| hypothetical protein PANDA_007824 [Ailuropoda melanoleuca]
          Length = 128

 Score = 37.8 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 27/77 (35%), Gaps = 10/77 (12%)

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
           E       L+ M  T+  R  H     Y+F      ++S     RIDHI+    + +   
Sbjct: 22  ETMILNDTLEQMDLTNTFRTLHPKTAEYTFVSSAHRTFS-----RIDHILAHKTSFNKFK 76

Query: 238 SARIDTKPRGWTKPSDH 254
             ++          SDH
Sbjct: 77  KIKV-----KPCIFSDH 88


>gi|169787460|gb|ACA80169.1| putative DNA lyase [Colletotrichum cereale]
          Length = 233

 Score = 37.8 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 22/57 (38%)

Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81
           +    DI+ +QETK + K+   + +    + +     K   G + ++ Y       
Sbjct: 2  FEILGADIVIMQETKIQRKDLHDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATCC 58


>gi|169787328|gb|ACA80103.1| putative DNA lyase [Colletotrichum cereale]
          Length = 233

 Score = 37.8 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 22/57 (38%)

Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81
           +    DI+ +QETK + K+   + +    + +     K   G + ++ Y       
Sbjct: 2  FEILGADIVIMQETKIQRKDLHDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATCC 58


>gi|169787316|gb|ACA80097.1| putative DNA lyase [Colletotrichum cereale]
          Length = 233

 Score = 37.8 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 22/57 (38%)

Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81
           +    DI+ +QETK + K+   + +    + +     K   G + ++ Y       
Sbjct: 2  FEILGADIVIMQETKIQRKDLHDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATCC 58


>gi|169787270|gb|ACA80074.1| putative DNA lyase [Colletotrichum cereale]
          Length = 233

 Score = 37.8 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 22/57 (38%)

Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81
           +    DI+ +QETK + K+   + +    + +     K   G + ++ Y       
Sbjct: 2  FEILGADIVIMQETKIQRKDLHDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATCC 58


>gi|169787266|gb|ACA80072.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787312|gb|ACA80095.1| putative DNA lyase [Colletotrichum cereale]
          Length = 233

 Score = 37.8 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 22/57 (38%)

Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81
           +    DI+ +QETK + K+   + +    + +     K   G + ++ Y       
Sbjct: 2  FEILGADIVIMQETKIQRKDLHDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATCC 58


>gi|169787234|gb|ACA80056.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787236|gb|ACA80057.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787238|gb|ACA80058.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787242|gb|ACA80060.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787248|gb|ACA80063.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787250|gb|ACA80064.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787262|gb|ACA80070.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787268|gb|ACA80073.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787276|gb|ACA80077.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787286|gb|ACA80082.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787294|gb|ACA80086.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787308|gb|ACA80093.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787464|gb|ACA80171.1| putative DNA lyase [Colletotrichum cereale]
          Length = 233

 Score = 37.8 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 22/57 (38%)

Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81
           +    DI+ +QETK + K+   + +    + +     K   G + ++ Y       
Sbjct: 2  FEILGADIVIMQETKIQRKDLHDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATCC 58


>gi|169787212|gb|ACA80045.1| putative DNA lyase [Colletotrichum cereale]
          Length = 232

 Score = 37.8 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 22/57 (38%)

Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81
           +    DI+ +QETK + K+   + +    + +     K   G + ++ Y       
Sbjct: 2  FEILGADIVIMQETKIQRKDLHDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATCC 58


>gi|169787208|gb|ACA80043.1| putative DNA lyase [Colletotrichum cereale]
          Length = 233

 Score = 37.8 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 22/57 (38%)

Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81
           +    DI+ +QETK + K+   + +    + +     K   G + ++ Y       
Sbjct: 2  FEILGADIVIMQETKIQRKDLHDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATCC 58


>gi|169787206|gb|ACA80042.1| putative DNA lyase [Colletotrichum cereale]
          Length = 233

 Score = 37.8 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 22/57 (38%)

Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81
           +    DI+ +QETK + K+   + +    + +     K   G + ++ Y       
Sbjct: 2  FEILGADIVIMQETKIQRKDLHDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATCC 58


>gi|169787196|gb|ACA80037.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787202|gb|ACA80040.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787204|gb|ACA80041.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787226|gb|ACA80052.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787252|gb|ACA80065.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787254|gb|ACA80066.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787296|gb|ACA80087.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787298|gb|ACA80088.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787314|gb|ACA80096.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787374|gb|ACA80126.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787376|gb|ACA80127.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787378|gb|ACA80128.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787380|gb|ACA80129.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787382|gb|ACA80130.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787384|gb|ACA80131.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787386|gb|ACA80132.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787388|gb|ACA80133.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787390|gb|ACA80134.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787392|gb|ACA80135.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787394|gb|ACA80136.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787396|gb|ACA80137.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787398|gb|ACA80138.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787432|gb|ACA80155.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787436|gb|ACA80157.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787450|gb|ACA80164.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787456|gb|ACA80167.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787488|gb|ACA80183.1| putative DNA lyase [Colletotrichum cereale]
          Length = 233

 Score = 37.8 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 22/57 (38%)

Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81
           +    DI+ +QETK + K+   + +    + +     K   G + ++ Y       
Sbjct: 2  FEILGADIVIMQETKIQRKDLHDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATCC 58


>gi|323352556|gb|EGA85055.1| Inp52p [Saccharomyces cerevisiae VL3]
          Length = 1111

 Score = 37.8 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 7/37 (18%)

Query: 8   TWNVNSIRARIHNLAAWI----KENNPDII--CLQET 38
           T+NVN   +R  +L+ W+     +  PD++   LQE 
Sbjct: 525 TFNVNG-NSRRADLSKWLFPIGDKFKPDVVVLGLQEV 560


>gi|323335797|gb|EGA77076.1| Inp52p [Saccharomyces cerevisiae Vin13]
          Length = 1111

 Score = 37.8 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 7/37 (18%)

Query: 8   TWNVNSIRARIHNLAAWI----KENNPDII--CLQET 38
           T+NVN   +R  +L+ W+     +  PD++   LQE 
Sbjct: 525 TFNVNG-NSRRADLSKWLFPIGDKFKPDVVVLGLQEV 560


>gi|256273815|gb|EEU08737.1| Inp52p [Saccharomyces cerevisiae JAY291]
          Length = 1183

 Score = 37.8 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 7/37 (18%)

Query: 8   TWNVNSIRARIHNLAAWI----KENNPDII--CLQET 38
           T+NVN   +R  +L+ W+     +  PD++   LQE 
Sbjct: 597 TFNVNG-NSRRADLSKWLFPIGDKFKPDVVVLGLQEV 632


>gi|207341735|gb|EDZ69710.1| YNL106Cp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 1183

 Score = 37.8 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 7/37 (18%)

Query: 8   TWNVNSIRARIHNLAAWI----KENNPDII--CLQET 38
           T+NVN   +R  +L+ W+     +  PD++   LQE 
Sbjct: 597 TFNVNG-NSRRADLSKWLFPIGDKFKPDVVVLGLQEV 632


>gi|190409094|gb|EDV12359.1| inositol polyphosphate 5-phosphatase [Saccharomyces cerevisiae
           RM11-1a]
          Length = 1183

 Score = 37.8 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 7/37 (18%)

Query: 8   TWNVNSIRARIHNLAAWI----KENNPDII--CLQET 38
           T+NVN   +R  +L+ W+     +  PD++   LQE 
Sbjct: 597 TFNVNG-NSRRADLSKWLFPIGDKFKPDVVVLGLQEV 632


>gi|6324224|ref|NP_014293.1| Inp52p [Saccharomyces cerevisiae S288c]
 gi|1730760|sp|P50942|INP52_YEAST RecName: Full=Inositol-1,4,5-trisphosphate 5-phosphatase 2;
           AltName: Full=Synaptojanin-like protein 2
 gi|1302022|emb|CAA95982.1| PIE3 [Saccharomyces cerevisiae]
 gi|285814546|tpg|DAA10440.1| TPA: Inp52p [Saccharomyces cerevisiae S288c]
          Length = 1183

 Score = 37.8 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 7/37 (18%)

Query: 8   TWNVNSIRARIHNLAAWI----KENNPDII--CLQET 38
           T+NVN   +R  +L+ W+     +  PD++   LQE 
Sbjct: 597 TFNVNG-NSRRADLSKWLFPIGDKFKPDVVVLGLQEV 632


>gi|929847|emb|CAA90520.1| ORF N2160 [Saccharomyces cerevisiae]
          Length = 1102

 Score = 37.8 bits (86), Expect = 1.5,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 7/37 (18%)

Query: 8   TWNVNSIRARIHNLAAWI----KENNPDII--CLQET 38
           T+NVN   +R  +L+ W+     +  PD++   LQE 
Sbjct: 597 TFNVNG-NSRRADLSKWLFPIGDKFKPDVVVLGLQEV 632


>gi|239834620|ref|ZP_04682948.1| outer membrane autotransporter barrel domain-containing protein
           [Ochrobactrum intermedium LMG 3301]
 gi|239822683|gb|EEQ94252.1| outer membrane autotransporter barrel domain-containing protein
           [Ochrobactrum intermedium LMG 3301]
          Length = 1199

 Score = 37.8 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 14/90 (15%), Positives = 28/90 (31%), Gaps = 24/90 (26%)

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSL--------------LHSARIDTKPRGWTKP 251
           ++  +     +K     IDH ++S                    +   ++    R     
Sbjct: 321 TWASW---DRAK-----IDHFLVSRPFGKWYEIVDDPNDPYTGVIKDVKVTRPGRQPEAI 372

Query: 252 SDHTPVIVSLDI--PEPRKKQQDSTSQNMK 279
           SDH PV        P+ +   ++ TS+   
Sbjct: 373 SDHEPVAHDFRWVGPQLQTYSENETSKTRL 402


>gi|169787372|gb|ACA80125.1| putative DNA lyase [Colletotrichum cereale]
          Length = 233

 Score = 37.8 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 22/57 (38%)

Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81
           +    DI+ +QETK + K+   + +    + +     K   G + ++ Y       
Sbjct: 2  FQILEADIVIMQETKIQRKDLHDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATCC 58


>gi|20279456|gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1509

 Score = 37.8 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 20/136 (14%), Positives = 43/136 (31%), Gaps = 13/136 (9%)

Query: 134 FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW-----ENDACFTLEVRQSFQKLQN 188
            L   +                  P                    C  ++ + +  + ++
Sbjct: 395 CLYGDAHSETKHRTWTTMRGLIDNPTTPWLMAGDFNEILFSHEKQCGRMKAQSAMDEFRH 454

Query: 189 MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR--IDHIMLSPEATSLLHSARIDTKPR 246
                 +         +++      S S+   IR  +D  + +PE  ++  +AR+     
Sbjct: 455 ALTDCGLDDLGFEGDAFTW---RNHSHSQEGYIREWLDRAVANPEWRAMFPAARVIN--- 508

Query: 247 GWTKPSDHTPVIVSLD 262
           G  + SDH PVI+ L+
Sbjct: 509 GDPRHSDHRPVIIELE 524


>gi|193212906|ref|YP_001998859.1| endonuclease/exonuclease/phosphatase [Chlorobaculum parvum NCIB
           8327]
 gi|193086383|gb|ACF11659.1| Endonuclease/exonuclease/phosphatase [Chlorobaculum parvum NCIB
           8327]
          Length = 341

 Score = 37.8 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 49/278 (17%), Positives = 85/278 (30%), Gaps = 42/278 (15%)

Query: 17  RIHNLAAWIKENN-----PDIICLQETKTEDKNFP--FETLQSLNYHIETCGQKSYNGVA 69
           RI  +   I++       PDI+   ET      F    + +    Y I+        G+ 
Sbjct: 73  RIAQVFRAIEQQREYERYPDIVAFAET-ENRGVFEGTLQAIDHAQYKIDYHESPDPRGID 131

Query: 70  ILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKIS 129
           I   + P  +                   + I    +  G+ +    N   S  +D K S
Sbjct: 132 IGLAWNPATLKFTGSKPCRVTLDNGRGTRYVIVAGFMASGHPFSVVLNHWPSRSFDAKWS 191

Query: 130 WIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNM 189
             KR       R  ++   +   +          +N    +      L      +++ + 
Sbjct: 192 EPKRIAAAKVARHIVDS--LTTRNPMAEIIVMGDFNDHPNDRSIRTVLGSSFDRKEVTSS 249

Query: 190 GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK----- 244
                    +DT    ++  YY   W      RID I++SP        + IDTK     
Sbjct: 250 ANRLLYNCWNDTKSPGTY--YYRKQWE-----RIDQILVSPALLDNSKLS-IDTKSFRVF 301

Query: 245 -----------------PRGWTKP--SDHTPVIVSLDI 263
                             RG  K   SDH P+++ +D+
Sbjct: 302 SIPEMFSHPGKTLYSTYQRGKFKGGYSDHLPLLLKIDV 339


>gi|255946389|ref|XP_002563962.1| Pc20g14870 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211588697|emb|CAP86816.1| Pc20g14870 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 1659

 Score = 37.8 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 19/58 (32%), Gaps = 4/58 (6%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
           ID ++ S     L+    I     G    SDH  +    D P    K Q+       P
Sbjct: 612 IDLVLASDNLADLMTKCVIH----GTKHGSDHRTIETIFDAPWSAPKHQERLRLKNAP 665


>gi|238059546|ref|ZP_04604255.1| hypothetical protein MCAG_00512 [Micromonospora sp. ATCC 39149]
 gi|237881357|gb|EEP70185.1| hypothetical protein MCAG_00512 [Micromonospora sp. ATCC 39149]
          Length = 338

 Score = 37.8 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 22/61 (36%), Gaps = 9/61 (14%)

Query: 221 IRIDHIM------LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDST 274
            R+DH++      +       L     D        PSDH  V ++LDI  P     +  
Sbjct: 280 WRLDHVLYRAGDPVRAATRPALLGTACDD---SGQYPSDHFGVALTLDIEAPAPGGSNPA 336

Query: 275 S 275
           S
Sbjct: 337 S 337


>gi|260831478|ref|XP_002610686.1| hypothetical protein BRAFLDRAFT_117919 [Branchiostoma floridae]
 gi|229296053|gb|EEN66696.1| hypothetical protein BRAFLDRAFT_117919 [Branchiostoma floridae]
          Length = 392

 Score = 37.8 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 6/51 (11%)

Query: 7  ATWNVNSIRARIHNLAAWIKENNPDIICLQETK-TEDKNFPFETLQSLNYH 56
           TW+V     R   L    +  N D++CLQE + +   +F    LQ L Y 
Sbjct: 27 LTWDV-----RKEKLLQQFQHYNVDVLCLQEVQESHYHDFFLPELQKLGYE 72


>gi|194882717|ref|XP_001975457.1| GG22325 [Drosophila erecta]
 gi|190658644|gb|EDV55857.1| GG22325 [Drosophila erecta]
          Length = 1504

 Score = 37.8 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 12/160 (7%), Positives = 37/160 (23%), Gaps = 2/160 (1%)

Query: 34   CLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR 93
            CL E K ++     + ++S     +      +    I           +           
Sbjct: 1013 CLGEIKCQNNATCIDGVESYKCECQPGFTGEFCDTKIQFCSPEFNPCANGAKCIDHFTHY 1072

Query: 94   FIEATFTINTQTLR--IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFA 151
              +     +       I +          +          +    +  +  E    +   
Sbjct: 1073 SCDCQAGFHGTNCTDNIDDCQNHMCQNGGTCVDGINDYQCRCPDDYTGKYCEGHNMISMM 1132

Query: 152  GDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191
                   Q H+C + + ++ +A  +  + +          
Sbjct: 1133 YPQTSPCQNHECKHGVCFQPNAQGSDYLCRCHPGYTGKWC 1172


>gi|163737422|ref|ZP_02144839.1| Endonuclease/exonuclease/phosphatase [Phaeobacter gallaeciensis
           BS107]
 gi|161388948|gb|EDQ13300.1| Endonuclease/exonuclease/phosphatase [Phaeobacter gallaeciensis
           BS107]
          Length = 331

 Score = 37.8 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 21/53 (39%), Gaps = 12/53 (22%)

Query: 223 IDHIMLSPEATSLLHSARI-----------DTKPR-GWTKPSDHTPVIVSLDI 263
           +D+IM+S        + RI           D   R      SDH PV + LD+
Sbjct: 278 LDYIMVSSGLRQPAANWRIWHPFEDAACYEDVALREALLAASDHFPVSLDLDL 330


>gi|292491294|ref|YP_003526733.1| endonuclease/exonuclease/phosphatase [Nitrosococcus halophilus
          Nc4]
 gi|291579889|gb|ADE14346.1| Endonuclease/exonuclease/phosphatase [Nitrosococcus halophilus
          Nc4]
          Length = 226

 Score = 37.8 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 21/43 (48%), Gaps = 11/43 (25%)

Query: 4  VTVATWNVNSIR--------ARIHNLAAWIKENNPDIICLQET 38
          + + T+N++S R        AR    A+ ++    D++ LQE 
Sbjct: 1  MRLVTYNISSCRGTDRCFNPART---ASVLRSLKADVLALQEV 40


>gi|260591557|ref|ZP_05857015.1| endonuclease/Exonuclease/phosphatase family protein [Prevotella
           veroralis F0319]
 gi|260536588|gb|EEX19205.1| endonuclease/Exonuclease/phosphatase family protein [Prevotella
           veroralis F0319]
          Length = 326

 Score = 37.8 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 23/63 (36%), Gaps = 21/63 (33%)

Query: 223 IDHIMLSPEATSLLHSARIDTKP---------------------RGWTKPSDHTPVIVSL 261
           +D I++S    S + S  I+  P                     R     SDH P+++ +
Sbjct: 264 LDQILISENLRSYVLSCHINDAPFLLEEDIKYGGVKPRRDYNGMRYNNGFSDHLPLVLQM 323

Query: 262 DIP 264
            IP
Sbjct: 324 AIP 326


>gi|285017645|ref|YP_003375356.1| hypothetical protein XALc_0850 [Xanthomonas albilineans GPE PC73]
 gi|283472863|emb|CBA15368.1| conserved hypothetical protein [Xanthomonas albilineans]
          Length = 255

 Score = 37.8 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/96 (15%), Positives = 27/96 (28%), Gaps = 14/96 (14%)

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
             +A    +      + +        R       + +F  +            IDHI+LS
Sbjct: 170 HPNAILMGDFNCVADRPEMQLLYQRTRLQPPACVVPTFPSWRPQ-------RAIDHILLS 222

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
                  H A            SDH  +   + +P+
Sbjct: 223 DSLRCNAHRAV-------PAAFSDHLALTTEIQVPQ 251


>gi|169625216|ref|XP_001806012.1| hypothetical protein SNOG_15875 [Phaeosphaeria nodorum SN15]
 gi|111055593|gb|EAT76713.1| hypothetical protein SNOG_15875 [Phaeosphaeria nodorum SN15]
          Length = 464

 Score = 37.8 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 22/171 (12%), Positives = 42/171 (24%), Gaps = 14/171 (8%)

Query: 2   SVVTVATWNVNSIR-------ARIHNLAAWIKENNP--DIICLQETKT-EDKNFPFET-- 49
           S + + + N   ++        R+  +A  I   +P  DI+ LQE  T +D N   E   
Sbjct: 8   SSIRILSLNCWGLKYIATLRNERLTEIANQIAAADPRPDIVGLQECWTQQDYNVIREKTN 67

Query: 50  -LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ-TLR 107
                     +        +      +   +V +          R             +R
Sbjct: 68  SFLPYGKFYHSGIFGGGLAILSKWPLEESNMVRYPLNGRPAAFYRGDWFVGKGVACARIR 127

Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP 158
           IG           +  +    +               E   +  G      
Sbjct: 128 IGPGRRDIAEVFCTHLHAPYETEPHDSYICHRTAQAWEITKLMRGAAERGH 178


>gi|325696374|gb|EGD38265.1| RgfB protein [Streptococcus sanguinis SK160]
          Length = 271

 Score = 37.8 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 28/250 (11%), Positives = 64/250 (25%), Gaps = 21/250 (8%)

Query: 18  IHNLAAWIKENNPDIICLQETK--TEDKNFPFETLQSL--NYHIETCGQKSYNGV---AI 70
           ++ LA  I +   D+ICLQE    TE +                      +   V   A 
Sbjct: 21  LNELAERILQEKYDVICLQEVNQLTESEQVVQAPFYQAVEGAIAIHQDHFALCLVEKLAE 80

Query: 71  LSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISW 130
                      +  G D+  +   I +   +  + + +  +  P           +    
Sbjct: 81  AGLDYHWSWAYNHIGFDIYNEGVAILSRNPMAPREVLVSEVNDPRDYHTRKVLLAETEVE 140

Query: 131 IK------RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQ 184
            +        L +  +  + E   + A    +        +         +   +    +
Sbjct: 141 GQLLTIASCHLSWWDKGFQGEWAKLEAELLKVKTPLVLMGDFNNPVGQQGYQTILASPLK 200

Query: 185 KLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK 244
              +                 + WD           ++ID++  S      +  + +   
Sbjct: 201 LQDSHAVAREAIGEATVEGTIAGWD------DNKHALKIDYVFTSQGMD--VERSAVVFD 252

Query: 245 PRGWTKPSDH 254
            +     SDH
Sbjct: 253 GKETPVVSDH 262


>gi|229189268|ref|ZP_04316289.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus ATCC 10876]
 gi|228594168|gb|EEK51966.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus ATCC 10876]
          Length = 788

 Score = 37.8 bits (86), Expect = 1.6,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%)

Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +DHI+++              ++ I  +     + SDH PV+  +D+
Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---QGRVSDHDPVLAQIDL 784


>gi|289768186|ref|ZP_06527564.1| conserved hypothetical protein [Streptomyces lividans TK24]
 gi|289698385|gb|EFD65814.1| conserved hypothetical protein [Streptomyces lividans TK24]
          Length = 293

 Score = 37.8 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 20/50 (40%), Gaps = 6/50 (12%)

Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271
           RID++    +    +    +  +P      SDH PV+  + +P     + 
Sbjct: 250 RIDYVTAGKDV--RIRRTAVPEEP----AASDHRPVVADVSLPRRTPGRD 293


>gi|256784304|ref|ZP_05522735.1| hypothetical protein SlivT_07438 [Streptomyces lividans TK24]
          Length = 276

 Score = 37.8 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 20/50 (40%), Gaps = 6/50 (12%)

Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271
           RID++    +    +    +  +P      SDH PV+  + +P     + 
Sbjct: 233 RIDYVTAGKDV--RIRRTAVPEEP----AASDHRPVVADVSLPRRTPGRD 276


>gi|21224501|ref|NP_630280.1| hypothetical protein SCO6176 [Streptomyces coelicolor A3(2)]
 gi|4008541|emb|CAA22510.1| conserved hypothetical protein [Streptomyces coelicolor A3(2)]
          Length = 276

 Score = 37.8 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 20/50 (40%), Gaps = 6/50 (12%)

Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271
           RID++    +    +    +  +P      SDH PV+  + +P     + 
Sbjct: 233 RIDYVTAGKDV--RIRRTAVPEEP----AASDHRPVVADVSLPRRTPGRD 276


>gi|332141756|ref|YP_004427494.1| extracellular ribonuclease/nuclease fusion protein [Alteromonas
            macleodii str. 'Deep ecotype']
 gi|327551778|gb|AEA98496.1| extracellular ribonuclease/nuclease fusion protein [Alteromonas
            macleodii str. 'Deep ecotype']
          Length = 1346

 Score = 37.8 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 33/98 (33%), Gaps = 31/98 (31%)

Query: 192  TDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT----KPR- 246
               +    D    YS+      S+    G  +DH + SP  T  +  A +      +PR 
Sbjct: 1194 YSNLVNFFDGDSAYSY------SFGGEMGY-LDHALSSPSLTEYVVDATVWHINADEPRV 1246

Query: 247  -------------------GWTKPSDHTPVIVSLDIPE 265
                                  + SDH PV+V L+ PE
Sbjct: 1247 FDYNVEFKSETQLSSYYGADAYRSSDHDPVVVVLNFPE 1284


>gi|332184870|gb|AEE27124.1| hypothetical protein FN3523_1821 [Francisella cf. novicida 3523]
          Length = 239

 Score = 37.8 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 45/247 (18%), Positives = 76/247 (30%), Gaps = 48/247 (19%)

Query: 21  LAAWIKEN----NPDIICLQE-TKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75
             A+I+      N DI CLQE     D  FP +    +N+      +    GVA +S + 
Sbjct: 32  FKAYIRHTYFNYNVDIFCLQEAVHQHDTKFPIDKF-DINFASNIVLRSHNYGVATVSHFP 90

Query: 76  PIEIVTHLPGDDLDVQARFIEATFTI-NTQTLRIGNLYLPHGNPITSTKYDDKISWIKRF 134
            I+ V  L      V      +  T  N    ++  + +   N  ++  Y+ +   IK F
Sbjct: 91  VIKNVKILTTHRESVINTHKASLITHLNINNTKVIVVNIHAINFKSNKVYEYEFEKIKEF 150

Query: 135 LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDA 194
           +     +  +           II    + +N    +    F  E       +       +
Sbjct: 151 IAPEKYKHPI-----------IIAGDFNTWNRKRVKLIKDFCREFCFKVAFIDEPQLVKS 199

Query: 195 IRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDH 254
            +  H    LY             +G+              L  A +        K SDH
Sbjct: 200 FQNNHLDFVLY-------------RGL-------------NLEKAAVLD----CKKISDH 229

Query: 255 TPVIVSL 261
            P+I   
Sbjct: 230 NPIIAEF 236


>gi|309362229|emb|CAP28348.2| hypothetical protein CBG_08683 [Caenorhabditis briggsae AF16]
          Length = 320

 Score = 37.8 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 39/299 (13%), Positives = 77/299 (25%), Gaps = 53/299 (17%)

Query: 4   VTVATWNV--------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55
           + + T+N+        N  +    ++       NPDI+ LQET     N        L +
Sbjct: 31  IRLMTFNIWQSGKNVENGQQKIAKHILMV----NPDIVALQETYA---NVTKNLTMMLGH 83

Query: 56  -HIETCGQKSYNGVAILSKYQP---------------IEIVTHLPGDDLDVQARFIEATF 99
             +       Y   AIL+++                 I + T        +   +     
Sbjct: 84  PWVAVERNHEYPDTAILTRHVIVPNTNLSTSGGVGVKIMLRTGYMVHFWSLHLDYTSYGP 143

Query: 100 TINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYN-IIP 158
                 L      +  G      +       +   +         + P+  AGD+N    
Sbjct: 144 YAANNKLVNRIDQILAGENTEYGRGPQIYEILTLPMMKKWMEKSDDVPIFIAGDFNGPSH 203

Query: 159 QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF---------WD 209
                    I  +        ++   +     + +          + ++         W+
Sbjct: 204 LDWTEQTKKIHGDWVIRWPATKELEDRGFTDTYREIYPNVLTNPGI-TWSTVNKFNPEWN 262

Query: 210 YYADSWSKNKGIRIDHIML-SPEATSLLHS-ARIDTKPR-----GWTKPSDHTPVIVSL 261
           Y           RID +    P     + + +  +   R         PSDH  V    
Sbjct: 263 YTIPEPQD----RIDFLFYKGPVVADQIMAYSGCEKPKRIPFHEHNDYPSDHFAVFADY 317


>gi|254587306|emb|CAX83710.1| endonuclease-reverse transcriptase [Schistosoma japonicum]
          Length = 1007

 Score = 37.8 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 42/265 (15%), Positives = 78/265 (29%), Gaps = 23/265 (8%)

Query: 6   VATWNVNSIRARIH-----NLAAWIKENNPDIICLQETK-TEDKNFPFETLQSLNYH-IE 58
           + TWNV   R          +AA +K  N  ++ + ET  T+       T + L Y   E
Sbjct: 29  IGTWNV---RTMWETGKTSQIAAEMKRYNLTVLGISETHWTQTGQKTLATGEVLLYSGHE 85

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
                   GVA++   +    +         +     +      T  +         GN 
Sbjct: 86  EENAPHTQGVALMLSKKARNALVGWEPHGPRIIKASFKTMKKGITMNIIQCYAPTNDGND 145

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
               ++ D++  I          + + +     G  N   +       +   N       
Sbjct: 146 EDKDQFYDRLQSIIAKCPGKDLTILMGDLNAKVGMDNTGYEDIMGRKGLGERNQNGERFT 205

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
              +F K+            H   H  ++      + ++     IDHI ++        S
Sbjct: 206 NLCAFNKM----VIGGTIFPHKRIHKVTWVSPDHTTENQ-----IDHICINR----KFRS 252

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263
                  RG    SDH  V+  + +
Sbjct: 253 TEDVRNRRGADIASDHHLVVAKMKL 277


>gi|255554853|ref|XP_002518464.1| hydrolase, putative [Ricinus communis]
 gi|223542309|gb|EEF43851.1| hydrolase, putative [Ricinus communis]
          Length = 429

 Score = 37.8 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 7/41 (17%)

Query: 2   SVVTVATWNVNSIR------ARIHNLAAWIKENNPDIICLQ 36
           S   + ++NV   R       R+  L   I+ ++PD+IC Q
Sbjct: 165 SSFKILSYNVW-FREALEVHKRMKALGDIIQLHSPDVICFQ 204


>gi|28973671|gb|AAO64154.1| unknown protein [Arabidopsis thaliana]
 gi|29824267|gb|AAP04094.1| unknown protein [Arabidopsis thaliana]
 gi|110737063|dbj|BAF00485.1| hypothetical protein [Arabidopsis thaliana]
          Length = 321

 Score = 37.8 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 19/52 (36%), Gaps = 13/52 (25%)

Query: 223 IDHIMLSPEATSLLHSARID-------TKPRGWT----KPSDHTPVIVSLDI 263
           +D+I +SP     +    I            G+      PSDH P+    +I
Sbjct: 269 LDYIFISPS--DFIKPVSILQLPEPDSPDVVGFLPNHHHPSDHLPIGAEFEI 318



 Score = 37.8 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 9/24 (37%), Positives = 13/24 (54%)

Query: 15 RARIHNLAAWIKENNPDIICLQET 38
          +AR H + + +K    D  CLQE 
Sbjct: 25 KARSHAILSVLKNLQADFFCLQEV 48


>gi|321449469|gb|EFX61903.1| hypothetical protein DAPPUDRAFT_302699 [Daphnia pulex]
          Length = 460

 Score = 37.8 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 9/30 (30%), Positives = 16/30 (53%), Gaps = 5/30 (16%)

Query: 9   WNVNSIRARIHNLAAWIKENNPDIICLQET 38
           WN     +R   +   +++N  D++CLQE 
Sbjct: 113 WN-----SRAERILREVRDNQADVLCLQEV 137


>gi|298204363|gb|ADI61830.1| endonuclease-reverse transcriptase [Bombyx mori]
          Length = 1245

 Score = 37.8 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 36/280 (12%), Positives = 84/280 (30%), Gaps = 25/280 (8%)

Query: 6   VATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           VAT+NV ++    R+  L   +K    D++ L E +         +++  +  I     +
Sbjct: 308 VATYNVRTLSTSHRLIELIDSLKNTTYDVVGLSEVR-----RVGTSVREYDDFIFCYKGE 362

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
           +   +          +          +  R       +N   L I  +Y P         
Sbjct: 363 TRGIIWCWLLLYRNNLQKKTSSVLNGISERVALLKLNLNGYQLNILQVYAPTEASNEDEV 422

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
                +  +   +     + + +     G+    P+P +                 R   
Sbjct: 423 ERFYDTINETLRKTGKNIIVMGDFNSKIGN----PRPEESLIMKNHGYGVRNNRGERLID 478

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
              +N             +  +++     +  +KN+   ID+I+        + + ++  
Sbjct: 479 FAYENKLSITNTFFKKPKNLRWTWRSPDGN--TKNE---IDYILT--NLDKNVLNVQVLN 531

Query: 244 KPRGWTKPSDHTPVIVSL---DIPEPRKKQQDSTSQNMKP 280
                  P+DH  V  +     I + R K  +   + +K 
Sbjct: 532 VI----FPTDHRLVRATFILQKITKSRAKYTNCLGKTLKT 567


>gi|92116447|ref|YP_576176.1| endonuclease/exonuclease/phosphatase [Nitrobacter hamburgensis
          X14]
 gi|91799341|gb|ABE61716.1| Endonuclease/exonuclease/phosphatase [Nitrobacter hamburgensis
          X14]
          Length = 292

 Score = 37.8 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 5/37 (13%)

Query: 6  VATWNVN-SI-RARI---HNLAAWIKENNPDIICLQE 37
          +A++N++  + R R    H     IKE  PDII LQE
Sbjct: 49 IASYNIHKGVGRDRRFDPHRTVRVIKEIQPDIIALQE 85


>gi|5597017|gb|AAC24982.2| reverse transcriptase [synthetic construct]
          Length = 1016

 Score = 37.8 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 39/283 (13%), Positives = 79/283 (27%), Gaps = 39/283 (13%)

Query: 5   TVATWNVNS---IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
            +A++NV +   IR ++  LA  ++  N D+ CL ET+ +D     E LQ  +  + +  
Sbjct: 20  KLASFNVRTLMQIRQQM-GLAMSLESLNVDVCCLSETRIQDS---SEVLQIRSPSVASKS 75

Query: 62  QKSY--------------------NGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI 101
                                   +  A  +    I I + L    L+   +        
Sbjct: 76  LFHVRLSGDPVASSSGLAGVGVALSARAEAALIDWIPINSRLCAVRLESSIKVRRNRREK 135

Query: 102 NTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161
               +                ++  +++ + +  R     +   +     G         
Sbjct: 136 RCLFVISAYAPTDCSPDAIKDEFYHQLTVLLQKARSTDIVVLAGDLNAQVGRLGT---EE 192

Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYA-DSWSKNKG 220
                             R       +  F  +    H      ++    A  +W++   
Sbjct: 193 SRLGGRWGLVGRRTDNGDRLLQLCTDHNLFLASTNFRHSHRRCATWRPPSASQAWTQ--- 249

Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
             IDHI +S      +               SDH  V  +L +
Sbjct: 250 --IDHIAISYRWRGCVQDC---RSFWSTYLESDHALVCANLTL 287


>gi|147845298|emb|CAN83372.1| hypothetical protein VITISV_034945 [Vitis vinifera]
          Length = 1471

 Score = 37.8 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 8/59 (13%), Positives = 21/59 (35%), Gaps = 7/59 (11%)

Query: 201  THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
               ++S+    +   +     R+D  +++              + R     SDH P+++
Sbjct: 984  QGGVFSW----SRGRNNQSWARLDRFLVTQNWLDHFSGVV---QSRLPRPTSDHFPILL 1035


>gi|118361193|ref|XP_001013827.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena
           thermophila]
 gi|89295594|gb|EAR93582.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena
           thermophila SB210]
          Length = 279

 Score = 37.8 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 22/95 (23%), Positives = 32/95 (33%), Gaps = 17/95 (17%)

Query: 4   VTVATWNVNSIRARIHNLAA-------WIKENNPDIICLQETKTEDKNFPFETLQS---- 52
           +   ++NV       HN             + +PD ICLQE  T+D  F           
Sbjct: 36  LKFISYNVW---FEKHNFEERNIELRKIFLQFDPDFICLQEV-TQD--FLQLIFSDDQIC 89

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDD 87
             Y+  +        V ILSKY       + P + 
Sbjct: 90  DKYYFSSSSLVQAYDVLILSKYPIPFKCRYFPSEM 124


>gi|239834270|ref|ZP_04682598.1| ATPase-like protein [Ochrobactrum intermedium LMG 3301]
 gi|239822333|gb|EEQ93902.1| ATPase-like protein [Ochrobactrum intermedium LMG 3301]
          Length = 727

 Score = 37.8 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 20/54 (37%)

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
           LS         +      RG T+P DH PV+     P   +  +  T +  + I
Sbjct: 601 LSHRLDWRHIESVALGNGRGLTQPQDHAPVVTEWHWPSSEEVAEGLTDEQKEAI 654


>gi|220907814|ref|YP_002483125.1| Endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 7425]
 gi|219864425|gb|ACL44764.1| Endonuclease/exonuclease/phosphatase [Cyanothece sp. PCC 7425]
          Length = 647

 Score = 37.8 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 24/65 (36%), Gaps = 7/65 (10%)

Query: 200 DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
                YS+  +  ++        +DH+++S           +       T+ SDH P + 
Sbjct: 590 PEVERYSYV-FQGNAQE------LDHVLVSSALQPRAQFDIVHLNAEFHTQLSDHDPCVA 642

Query: 260 SLDIP 264
            L +P
Sbjct: 643 RLLLP 647


>gi|47227637|emb|CAG09634.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 553

 Score = 37.8 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/88 (17%), Positives = 27/88 (30%), Gaps = 5/88 (5%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKN---FPFETLQSLNYHIETCGQKSYNGVAILSK 73
           R   +   I   + DII LQE   E +       ETL+   Y    C +     V+   +
Sbjct: 215 RKKGIMEEITNCDADIISLQEV--ETEQYYTLFLETLKERGYDGYFCPKSRAKLVSEQER 272

Query: 74  YQPIEIVTHLPGDDLDVQARFIEATFTI 101
                  +    +   +  +       +
Sbjct: 273 KHVEGCASFFKTEKFTLVQKHTVEFNQV 300


>gi|170782608|ref|YP_001710942.1| hypothetical protein CMS_2268 [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169157178|emb|CAQ02359.1| conserved hypothetical protein [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 273

 Score = 37.8 bits (86), Expect = 1.7,   Method: Composition-based stats.
 Identities = 33/247 (13%), Positives = 66/247 (26%), Gaps = 24/247 (9%)

Query: 17  RIHNLAAWIKENNPDIICLQE-----TKTEDKNFPFETLQSLNYHIETCGQKSYNGVAIL 71
           R   L  ++++  P ++ +QE      +  +K  P    + +    E      +  +   
Sbjct: 38  RQEVLTRFLQQERPTVLGVQEALWPQIQAIEKALPPS-YRMVGQGREGGSHGEHGAIFY- 95

Query: 72  SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWI 131
            +   + ++ H      D        T+      +     +            D  +   
Sbjct: 96  -QASRLTLLEHDVMWLSDTPDVIGSMTWGNPMPRILTWARFQDEATGHPLVVLDTHLDHD 154

Query: 132 KRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191
               R  +     E          ++           +  DA       +          
Sbjct: 155 VAEARDRAAEAIAELVRTRFAGLPLVLMGDFNAPVDSFPYDALTRRAGLRDSWLDTARQA 214

Query: 192 TDAIRATHDTHHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTK 250
           T A           +F DY         G  RID I++S      + +A ++        
Sbjct: 215 TPAFG---------TFPDYR----PPVVGAPRIDWILVSERVD--VRAAAVNDFTWRGRM 259

Query: 251 PSDHTPV 257
            SDH PV
Sbjct: 260 MSDHLPV 266


>gi|322797498|gb|EFZ19553.1| hypothetical protein SINV_12060 [Solenopsis invicta]
          Length = 227

 Score = 37.8 bits (86), Expect = 1.8,   Method: Composition-based stats.
 Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKN 44
             + +  WNV  I  +      +I   N DII L ET  EDK 
Sbjct: 174 RKLKIIFWNVAGINNKDEEFWEYIG--NFDIINLTETWIEDKK 214


>gi|319954984|ref|YP_004166251.1| endonuclease i [Cellulophaga algicola DSM 14237]
 gi|319423644|gb|ADV50753.1| Endonuclease I [Cellulophaga algicola DSM 14237]
          Length = 1976

 Score = 37.8 bits (86), Expect = 1.8,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 22/58 (37%), Gaps = 8/58 (13%)

Query: 209  DYYADSWSKNKGIRIDHIMLSPEATSLLHSARI-----DTKPRGWTKPSDHTPVIVSL 261
            DY +  + +N    IDHI +S E ++      +            T  SDH PV    
Sbjct: 1629 DYRSYVFRENM---IDHITVSNELSASYIDGSVSVGYEFYDTDYTTTVSDHFPVSARF 1683


>gi|20513185|emb|CAC85650.1| reverse transcriptase [Yarrowia lipolytica]
          Length = 1300

 Score = 37.8 bits (86), Expect = 1.8,   Method: Composition-based stats.
 Identities = 33/262 (12%), Positives = 71/262 (27%), Gaps = 15/262 (5%)

Query: 4   VTVATWNVNSIRAR--IHNLAAWI-----KENNPDIICLQETKTEDKNF-PFETLQSLNY 55
           V V T N+   +    ++ L   I       + PD++ LQET   D +    + + S + 
Sbjct: 26  VKVITANIGGFKMAEALNRLPDTIVNIIRTTHYPDLVLLQETNWVDSSLQTAQQIISNSP 85

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
           +            A +S       + +     +       E    ++ +           
Sbjct: 86  YPGGRHYTLLGSTAGVSNRSVGVGLVYSDNVTITNFTTVFEYFPALDNRLCLADVHIKGT 145

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
              ++                       L++ L        +    D       +     
Sbjct: 146 DRHLSLINVYAPNEQGASPFTNRQFYQSLDDYLRLQPCQYPLIAAGDWNAVASNDGRIGE 205

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            +                    +     LY+  +    +     G R+D + +S   +  
Sbjct: 206 KVTTHLKDFLANWDLLDTYTLISKHRKGLYTHTNNSRGA-----GRRLDQLHISSTLSQW 260

Query: 236 LHSARIDTKPRGW--TKPSDHT 255
           + S ++ T  +G   TK S H 
Sbjct: 261 IKSTQLVTNKQGHNITKSSHHA 282


>gi|326779823|ref|ZP_08239088.1| Endonuclease/exonuclease/phosphatase [Streptomyces cf. griseus
          XylebKG-1]
 gi|326660156|gb|EGE45002.1| Endonuclease/exonuclease/phosphatase [Streptomyces cf. griseus
          XylebKG-1]
          Length = 260

 Score = 37.8 bits (86), Expect = 1.8,   Method: Composition-based stats.
 Identities = 14/36 (38%), Positives = 21/36 (58%)

Query: 2  SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQE 37
          +V+ V ++NV S+R     LA  I    PD+I +QE
Sbjct: 17 AVIRVLSYNVRSLRDDTAALARVIHACAPDLILVQE 52


>gi|147792016|emb|CAN70844.1| hypothetical protein VITISV_007637 [Vitis vinifera]
          Length = 1676

 Score = 37.8 bits (86), Expect = 1.8,   Method: Composition-based stats.
 Identities = 8/22 (36%), Positives = 14/22 (63%)

Query: 21  LAAWIKENNPDIICLQETKTED 42
           +   IK    D++C+QETK ++
Sbjct: 610 IKDVIKSQKVDLVCIQETKIQE 631


>gi|67625701|tpe|CAJ00236.1| TPA: endonuclease-reverse transcriptase [Schistosoma mansoni]
          Length = 992

 Score = 37.8 bits (86), Expect = 1.8,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 81/265 (30%), Gaps = 22/265 (8%)

Query: 6   VATWNVNSIRA-----RIHNLAAWIKENNPDIICLQETK-TEDKNFPFETLQSLNYH-IE 58
           + TWNV   R      R+  ++A +++ N +++ + ET  T+       + + L Y   E
Sbjct: 15  IGTWNV---RTMWETGRVFQISAEMRKYNLEVLGISETHWTQVGQQRLSSGELLLYSGHE 71

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
                   GVA++   +    +         +     +      T  +          + 
Sbjct: 72  EENAPHTQGVALMLSRKAQNALIGWESHGPRIIKASFKTKREGITMNIIQCYAPTNDYDE 131

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
               ++ D++  I          + + +     G  N   +                   
Sbjct: 132 DAKNQFYDRLQSIFEKCPTKDLTILMGDFNAKVGKDNTGYED----VMGQHGLGGRNENG 187

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
            R +     N          H   H  ++     D  ++N+   IDH+ ++ +    +  
Sbjct: 188 DRFANLCAFNKLVIGGTIFPHRNIHKATWIS--PDHTTQNQ---IDHVCINKKFRRTMED 242

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLDI 263
                  RG    SDH  ++  + +
Sbjct: 243 V---RTRRGADIASDHHLLVAKMKL 264


>gi|91793693|ref|YP_563344.1| endonuclease/exonuclease/phosphatase [Shewanella denitrificans
           OS217]
 gi|91715695|gb|ABE55621.1| Endonuclease/exonuclease/phosphatase [Shewanella denitrificans
           OS217]
          Length = 475

 Score = 37.8 bits (86), Expect = 1.8,   Method: Composition-based stats.
 Identities = 41/281 (14%), Positives = 80/281 (28%), Gaps = 43/281 (15%)

Query: 2   SVVTVATWNV------NS-IRARIHNLAAWIKENNPDIICLQETKTE-DKNFPFETLQSL 53
           + +TV T+N+       S I  R+  L   ++ +  D++ LQE        F     Q  
Sbjct: 203 NSLTVMTYNIWALPVIASHINERLALLPQKMRGH--DVLMLQEVFAPGRGAFLRALAQEY 260

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYL 113
            Y      +   N             +           +               I     
Sbjct: 261 PYQTRMLDKSGVNIYDGGVMIVSRYPIVAQAQFVYPDCSGTDCFADKGINYAQVIKQGE- 319

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
                     +    +     +  ++++ + ++   FA    I       Y      N  
Sbjct: 320 ------AYHVFATHTASFDTDVARSNRQKQFKQMREFAHSLAIPADETVIYGGDFNVNKR 373

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY--SFWDYYADSWS-------KNKGIRID 224
            F  +                ++A   ++  Y  S +D   + ++       +N    +D
Sbjct: 374 KFEDDY---------QQMFANLKAKQPSYSGYIESTFDPRINEFAGTPLSGGENVEY-LD 423

Query: 225 HIMLSPEATSLLHSARIDTKPRG-----WTKP--SDHTPVI 258
           +I++S E      +      PR      W K   SDH PV+
Sbjct: 424 YIVISDEYAQTQSNDNDVKVPRSSAASLWQKWNLSDHFPVV 464


>gi|56696006|ref|YP_166360.1| endonuclease/exonuclease/phosphatase family protein [Ruegeria
           pomeroyi DSS-3]
 gi|56677743|gb|AAV94409.1| endonuclease/exonuclease/phosphatase family protein [Ruegeria
           pomeroyi DSS-3]
          Length = 337

 Score = 37.8 bits (86), Expect = 1.8,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 22/53 (41%), Gaps = 12/53 (22%)

Query: 223 IDHIMLSPEATSLLHSARIDT-----------KPR-GWTKPSDHTPVIVSLDI 263
           +D++M+S    +   + RI             + R      SDH PV + +DI
Sbjct: 285 LDYVMISKGLMARRPAWRIWHPFDDAECWQMVELREALLTASDHFPVTLDIDI 337


>gi|260589681|ref|ZP_05855594.1| putative hyaluronidase [Blautia hansenii DSM 20583]
 gi|260539921|gb|EEX20490.1| putative hyaluronidase [Blautia hansenii DSM 20583]
          Length = 1828

 Score = 37.8 bits (86), Expect = 1.8,   Method: Composition-based stats.
 Identities = 4/144 (2%), Positives = 26/144 (18%), Gaps = 3/144 (2%)

Query: 78   EIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF 137
             + T      ++     +     ++     +          + +  +   +         
Sbjct: 1654 WLYTGNHWYYMNDNGIMVTGWAAVDGHWYYMDQWGAMCTGWVAADGHWYYMDQWGAMCTG 1713

Query: 138  ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA 197
                + ++    +   +  +           +  +    +                    
Sbjct: 1714 ---WVAVDGHWYYMDQWGAMCIGWVLVGDTWYYMNGSGAMCTGWVAADGHWYYMDQWGAM 1770

Query: 198  THDTHHLYSFWDYYADSWSKNKGI 221
                  +   W Y     +   G 
Sbjct: 1771 CTGWVVVDGHWYYMDQWGAMRTGW 1794


>gi|190892922|ref|YP_001979464.1| hypothetical protein RHECIAT_CH0003338 [Rhizobium etli CIAT 652]
 gi|190698201|gb|ACE92286.1| hypothetical protein RHECIAT_CH0003338 [Rhizobium etli CIAT 652]
          Length = 357

 Score = 37.8 bits (86), Expect = 1.8,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 20/47 (42%), Gaps = 14/47 (29%)

Query: 5  TVATWNV-N-----S--IR------ARIHNLAAWIKENNPDIICLQE 37
           +A+WN+ N        +R      A   ++     +  PD++ LQE
Sbjct: 26 KLASWNIGNLASKPGVPLRGHARDEAEYQHIRDIFAKLEPDVVALQE 72


>gi|256088084|ref|XP_002580189.1| carbon catabolite repressor protein [Schistosoma mansoni]
 gi|238665702|emb|CAZ36428.1| carbon catabolite repressor protein, putative [Schistosoma mansoni]
          Length = 658

 Score = 37.8 bits (86), Expect = 1.8,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 32/92 (34%), Gaps = 3/92 (3%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTE--DKNFPFETLQSLNYHIETCGQKSYNGVAILSKY 74
           R   +   I+  + +IICLQE +T+  ++ F  E LQ LNY      +     + +    
Sbjct: 246 RRRAILDEIRIYHANIICLQELRTDHFEEVFKPE-LQKLNYDAVFLPKSRRRTMELKESK 304

Query: 75  QPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
           +          +  +    F        T   
Sbjct: 305 KVDGCAIFWQTNKFEKLHEFHHEFMLSCTSMC 336


>gi|195429361|ref|XP_002062731.1| GK19542 [Drosophila willistoni]
 gi|194158816|gb|EDW73717.1| GK19542 [Drosophila willistoni]
          Length = 1514

 Score = 37.8 bits (86), Expect = 1.8,   Method: Composition-based stats.
 Identities = 18/160 (11%), Positives = 39/160 (24%), Gaps = 2/160 (1%)

Query: 34   CLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR 93
            CL ETK ++     + +QS     +      Y    I    Q      +           
Sbjct: 1023 CLGETKCQNNATCIDGVQSYTCECQPGFTGEYCDTKIQFCSQEFNPCANGAKCMDHFTHY 1082

Query: 94   FIEATFTINTQTLR--IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFA 151
              +     +       I +          +          K    F  +  E    +   
Sbjct: 1083 SCDCLAGFHGINCTDNIDDCQNHMCQNGGTCIDGINDYVCKCPDDFTGKYCEGHNMISMM 1142

Query: 152  GDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191
                   Q H+C + + ++ +A  +  + +          
Sbjct: 1143 YPQTSPCQNHECKHGVCFQPNAAGSDYLCKCHPGYTGKWC 1182


>gi|110288963|gb|AAP53315.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1505

 Score = 37.8 bits (86), Expect = 1.8,   Method: Composition-based stats.
 Identities = 20/136 (14%), Positives = 43/136 (31%), Gaps = 13/136 (9%)

Query: 134 FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW-----ENDACFTLEVRQSFQKLQN 188
            L   +                  P                    C  ++ + +  + ++
Sbjct: 391 CLYGDAHSETKHRTWTTMRGLIDNPTTPWLMAGDFNEILFSHEKQCGRMKAQSAMDEFRH 450

Query: 189 MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR--IDHIMLSPEATSLLHSARIDTKPR 246
                 +         +++      S S+   IR  +D  + +PE  ++  +AR+     
Sbjct: 451 ALTDCGLDDLGFEGDAFTW---RNHSHSQEGYIREWLDRAVANPEWRAMFPAARVIN--- 504

Query: 247 GWTKPSDHTPVIVSLD 262
           G  + SDH PVI+ L+
Sbjct: 505 GDPRHSDHRPVIIELE 520


>gi|242003618|ref|XP_002422799.1| Skeletal muscle and kidney-enriched inositol phosphatase,
          putative [Pediculus humanus corporis]
 gi|212505657|gb|EEB10061.1| Skeletal muscle and kidney-enriched inositol phosphatase,
          putative [Pediculus humanus corporis]
          Length = 428

 Score = 37.8 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 21/78 (26%), Positives = 31/78 (39%), Gaps = 16/78 (20%)

Query: 1  MSVVTV--ATWNVNSIRARIH---NLAAWI-----KENNPD--IICLQETKTEDKNFPFE 48
          M  + +   ++NV    A      NL   +     +EN PD  I+ LQE K +  N   +
Sbjct: 1  MDSLRIYIVSYNV----ACKPPEENLEELLGFEKSEENLPDFYIVGLQEVKAQLYNIVLD 56

Query: 49 TLQSLNYHIETCGQKSYN 66
           L    + I     KS N
Sbjct: 57 ALLDDPWTIAFKQLKSKN 74


>gi|222615910|gb|EEE52042.1| hypothetical protein OsJ_33770 [Oryza sativa Japonica Group]
          Length = 222

 Score = 37.8 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 21/56 (37%), Gaps = 4/56 (7%)

Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           +D   +    N  +R+D  +       +   A I       +  SDH P+ +  ++
Sbjct: 48  YDNRREGR-NNVRVRLDRALADDNWRDIFSEAHI---VHLTSPCSDHCPIQLQFNM 99


>gi|50915043|ref|YP_061015.1| exodeoxyribonuclease III [Streptococcus pyogenes MGAS10394]
 gi|50904117|gb|AAT87832.1| Exodeoxyribonuclease III [Streptococcus pyogenes MGAS10394]
          Length = 294

 Score = 37.8 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 35/274 (12%), Positives = 84/274 (30%), Gaps = 20/274 (7%)

Query: 3   VVTVATWNVNSIRAR--IHNLAAW---IKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57
           +  V T N +S      +  L A    I     DIICLQE    ++    E    L  + 
Sbjct: 23  MTKVLTLNTHSWMQANTLKKLVALAEHILAEKYDIICLQEI---NQLIESELATDLPRYQ 79

Query: 58  E-----TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
                 +  +  +  + I    +  +        +      + E    ++ Q + + ++ 
Sbjct: 80  ALSGTPSIHKDHFALLLIHYLQKRGQHYYWSWAYNHIGYDIYQEGVAILSKQPIHVSDIL 139

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLI---FAGDYNIIPQPHDCYNPIIW 169
           +      T+      +             + +        F G++  + +     N  + 
Sbjct: 140 VSAMADETNYHTRRSLIAKTTLDGKEVAVVNVHLSWFDKGFLGEWEKLEKELLTLNCPLL 199

Query: 170 ENDACFTLEVRQSFQKLQN--MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227
                     +  +Q +    +   D+ +        +S            + +++DH+ 
Sbjct: 200 LMGDFNNPTDQDGYQVMMGSPLDLQDSHKVADHVFGDHSIVADIDGWQGNKEALKVDHVF 259

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
            S +    + S++   +       SDH  + V+L
Sbjct: 260 TSKDFI--IRSSKTTFEGGDAPVVSDHYGLEVTL 291


>gi|188989673|ref|YP_001901683.1| putative extracellular nuclease [Xanthomonas campestris pv.
           campestris str. B100]
 gi|167731433|emb|CAP49608.1| putative extracellular nuclease [Xanthomonas campestris pv.
           campestris]
          Length = 572

 Score = 37.8 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 22/56 (39%), Gaps = 14/56 (25%)

Query: 222 RIDHIMLSPEATSLLHSA---RIDTKPR-----------GWTKPSDHTPVIVSLDI 263
           R+DH +LSP     L  A    I+               G  + SDH PV++   +
Sbjct: 517 RLDHALLSPAMAKQLRGAAEWHINADAMDDAGYAKRNLPGPWRSSDHDPVLLGFAL 572


>gi|163749177|ref|ZP_02156427.1| hypothetical protein KT99_20089 [Shewanella benthica KT99]
 gi|161331247|gb|EDQ02136.1| hypothetical protein KT99_20089 [Shewanella benthica KT99]
          Length = 76

 Score = 37.8 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 13/60 (21%)

Query: 219 KGIRIDHIMLSPEATSL--LHSARIDTKP---RGWTKPS--------DHTPVIVSLDIPE 265
           KG  +D+I+LS E  +   L  A +       R    PS        DH PV+++L I E
Sbjct: 17  KGSVLDYILLSSEFDAKNDLSLAEVGRYETYDRHLINPSFEHDSQSTDHAPVMITLAIRE 76


>gi|21229733|ref|NP_635650.1| nuclease [Xanthomonas campestris pv. campestris str. ATCC 33913]
 gi|66766610|ref|YP_241372.1| nuclease [Xanthomonas campestris pv. campestris str. 8004]
 gi|21111221|gb|AAM39574.1| nuclease [Xanthomonas campestris pv. campestris str. ATCC 33913]
 gi|66571942|gb|AAY47352.1| nuclease [Xanthomonas campestris pv. campestris str. 8004]
          Length = 606

 Score = 37.8 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 22/56 (39%), Gaps = 14/56 (25%)

Query: 222 RIDHIMLSPEATSLLHSA---RIDTKPR-----------GWTKPSDHTPVIVSLDI 263
           R+DH +LSP     L  A    I+               G  + SDH PV++   +
Sbjct: 551 RLDHALLSPAMAKQLRGAAEWHINADAMDDAGYAKRNLPGPWRSSDHDPVLLGFAL 606


>gi|83815707|ref|YP_446788.1| endonuclease/exonuclease/phosphatase family protein, putative
           [Salinibacter ruber DSM 13855]
 gi|83757101|gb|ABC45214.1| endonuclease/exonuclease/phosphatase family protein, putative
           [Salinibacter ruber DSM 13855]
          Length = 320

 Score = 37.8 bits (86), Expect = 1.9,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 17/46 (36%), Gaps = 3/46 (6%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268
           IDHI   P+    +              PSDH  V  +L +P   K
Sbjct: 262 IDHIFYPPQFFEAV---DTQRWCGRPAPPSDHCAVTAALRLPSRAK 304


>gi|320587729|gb|EFX00204.1| transcriptional effector [Grosmannia clavigera kw1407]
          Length = 693

 Score = 37.5 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 29/105 (27%), Gaps = 21/105 (20%)

Query: 4   VTVATWNVNSIR---------------A---RIHNLAAWIKENNPDIICLQE--TKTEDK 43
           + V +WN+   R               A   R   +   I+  N D +CLQE  T    +
Sbjct: 327 IKVFSWNILGERYATPQVFSYTPSGALAWDYRKEKIMDEIRYRNADFVCLQEITTDALRE 386

Query: 44  NFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDL 88
            F  E L   +Y      +     +                G   
Sbjct: 387 TFGPE-LAQADYRSIHYPRSKARTMTEKDAATVDGCAIFYKGSKF 430


>gi|242070283|ref|XP_002450418.1| hypothetical protein SORBIDRAFT_05g005061 [Sorghum bicolor]
 gi|241936261|gb|EES09406.1| hypothetical protein SORBIDRAFT_05g005061 [Sorghum bicolor]
          Length = 753

 Score = 37.5 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 28/259 (10%), Positives = 66/259 (25%), Gaps = 33/259 (12%)

Query: 4   VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           +    WN   I   A +  L    K+  P ++ + ET           +++L Y +    
Sbjct: 1   MKTLCWNCRGIGNPATVKELRDLAKDYAPSVMFIMET-----QISKYRVENLRYTLSFDN 55

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
             + N      +   + +  +        +         I+        +   +G P  S
Sbjct: 56  SFAVNSSG---RSGGLGLFWNNDVLLSIQKYSNYHIDTIISEHGKEPRRMSFIYGEPNRS 112

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDY-NIIPQPHDCYNPIIWENDACFTLEVR 180
            +Y       +         + + +          + P   + Y      +         
Sbjct: 113 FRYRTWDIMKQMRSDTDLPWVCMGDFNEILRREEQLGPNEREEYLMEGVRDAVDMCQLRD 172

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
             +  L                            + +   +R+D  + S    +    A 
Sbjct: 173 IGYIGLDWTFEKKVA----------------GGHFVR---VRLDRALASVNWCARFPLAA 213

Query: 241 IDTKPRGWTKPSDHTPVIV 259
           +          SDH P+++
Sbjct: 214 VQH---LTAVKSDHCPILL 229


>gi|239995387|ref|ZP_04715911.1| extracellular ribonuclease/nuclease fusion protein [Alteromonas
            macleodii ATCC 27126]
          Length = 1097

 Score = 37.5 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 26/73 (35%), Gaps = 24/73 (32%)

Query: 223  IDHIMLSPEATSLLHSARIDT----KPR--------------------GWTKPSDHTPVI 258
            +DH + S   T  +  A +      +PR                       + SDH PVI
Sbjct: 964  LDHALSSSTLTEYVADATVWHINADEPRVFDYNVEYKSETQLSSYYGADAYRSSDHDPVI 1023

Query: 259  VSLDIPEPRKKQQ 271
            V LD PE  + + 
Sbjct: 1024 VVLDFPETSEPEP 1036


>gi|281350370|gb|EFB25954.1| hypothetical protein PANDA_019434 [Ailuropoda melanoleuca]
          Length = 96

 Score = 37.5 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 21/91 (23%), Positives = 31/91 (34%), Gaps = 10/91 (10%)

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
                 E+R     L  + FTD  RA H     Y+F      +       RIDHI+    
Sbjct: 14  KQKINKEIRSLNDTLDQIDFTDIYRAFHPKATEYTFSSSAHGT-----CSRIDHILGRKL 68

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
             +      I          SDH+ + + L+
Sbjct: 69  HLNRYQKTGIIPCI-----FSDHSALKLELN 94


>gi|119946323|ref|YP_944003.1| endonuclease/exonuclease/phosphatase [Psychromonas ingrahamii 37]
 gi|119864927|gb|ABM04404.1| Endonuclease/exonuclease/phosphatase [Psychromonas ingrahamii 37]
          Length = 1010

 Score = 37.5 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 32/106 (30%), Gaps = 29/106 (27%)

Query: 185 KLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA----- 239
             ++ G+ + IR  H   H YS+ D             +D+I+ S      +  +     
Sbjct: 751 MTESYGYANVIRDRHPESHSYSYNDEVGT---------LDYILASASLKDKIVDSMYWNI 801

Query: 240 ---------------RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQ 270
                              K     + SDH P IV L+  +     
Sbjct: 802 NSSESSLFEYSTKYTGYLPKYDNAYRSSDHDPAIVVLNFADKSVTP 847


>gi|20092415|ref|NP_618490.1| hypothetical protein MA3615 [Methanosarcina acetivorans C2A]
 gi|19917671|gb|AAM06970.1| predicted protein [Methanosarcina acetivorans C2A]
          Length = 238

 Score = 37.5 bits (85), Expect = 1.9,   Method: Composition-based stats.
 Identities = 28/264 (10%), Positives = 71/264 (26%), Gaps = 28/264 (10%)

Query: 1   MSVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETC 60
           M  + +  WN N            I    PD++         +    +  ++  Y     
Sbjct: 1   MLNMRIIAWNCN---MAFRKKYEQILPYEPDLL------VVPECEHPDKFKNKFYDDVLW 51

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
             ++ N    +  +   EI  H    +       ++ +       + + +          
Sbjct: 52  IGENRNKGLAVFSFNGFEIAIHESYCESYRYVLPVKVSHNREINLIAVWSQNNK--EDPG 109

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
                +    +  +         +     +   ++     +  +  +    +     E+ 
Sbjct: 110 RRYIGEVWQSLNYYKDMFGSPTIIAGDFNWNVIWDSEHLKYPLHGTLADVINLLNRFEIS 169

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG--IRIDHIMLSPEATSLLHS 238
             +   + + F +          LY         + KN+     ID+I    +  +    
Sbjct: 170 SIYHTSKQVKFGNE-----KDPTLY---------FRKNRQTPYHIDYIFAPVDLINCRKP 215

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
                K   W   SDH P+I  ++
Sbjct: 216 VN-LGKYEDWISLSDHMPLIAEIE 238


>gi|229010475|ref|ZP_04167677.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides DSM 2048]
 gi|228750673|gb|EEM00497.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides DSM 2048]
          Length = 788

 Score = 37.5 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 22/47 (46%), Gaps = 9/47 (19%)

Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +DHI+++              ++ I  +     + SDH PV+V +D+
Sbjct: 741 LDHILVTNNIAPYTIVDPVHLNSNIMKE---HGRVSDHDPVLVQIDL 784


>gi|84516871|ref|ZP_01004229.1| hypothetical protein SKA53_06827 [Loktanella vestfoldensis SKA53]
 gi|84509339|gb|EAQ05798.1| hypothetical protein SKA53_06827 [Loktanella vestfoldensis SKA53]
          Length = 257

 Score = 37.5 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 18/39 (46%), Gaps = 5/39 (12%)

Query: 4  VTVATWNVN---SIRARIH--NLAAWIKENNPDIICLQE 37
          + +A++N+     +  R     +   +   + D+I LQE
Sbjct: 29 LRLASYNIRKAKGVDGRYDPGRIVDILAGLDADVIALQE 67


>gi|296501782|ref|YP_003663482.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           thuringiensis BMB171]
 gi|296322834|gb|ADH05762.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           thuringiensis BMB171]
          Length = 788

 Score = 37.5 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%)

Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +DHI+++              ++ I  +     + SDH PV+  +D+
Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784


>gi|315497896|ref|YP_004086700.1| endonuclease/exonuclease/phosphatase [Asticcacaulis excentricus CB
           48]
 gi|315415908|gb|ADU12549.1| Endonuclease/exonuclease/phosphatase [Asticcacaulis excentricus CB
           48]
          Length = 315

 Score = 37.5 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 27/85 (31%), Gaps = 15/85 (17%)

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEA-TSLLHSAR 240
            +           +     +   +++    A       GI+IDH++ +       L    
Sbjct: 245 LWSGSMEPLMRARMSWPAGSGLRHTWPTGRAL-----LGIQIDHVL-TKGLPAGRLT--- 295

Query: 241 IDTKPRGWTKPSDHTPVIVSLDIPE 265
           +          SDH PV   L +PE
Sbjct: 296 VLRHV-----GSDHLPVRADLVLPE 315


>gi|228904025|ref|ZP_04068131.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis IBL
           4222]
 gi|228855621|gb|EEN00175.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis IBL
           4222]
          Length = 792

 Score = 37.5 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%)

Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +DHI+++              ++ I  +     + SDH PV+  +D+
Sbjct: 745 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 788


>gi|228906812|ref|ZP_04070681.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis IBL
           200]
 gi|228852816|gb|EEM97601.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis IBL
           200]
          Length = 788

 Score = 37.5 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%)

Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +DHI+++              ++ I  +     + SDH PV+  +D+
Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784


>gi|228919906|ref|ZP_04083261.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|228839722|gb|EEM85008.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
          Length = 788

 Score = 37.5 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%)

Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +DHI+++              ++ I  +     + SDH PV+  +D+
Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784


>gi|228932469|ref|ZP_04095350.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|228827159|gb|EEM72912.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
          Length = 788

 Score = 37.5 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%)

Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +DHI+++              ++ I  +     + SDH PV+  +D+
Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784


>gi|228944800|ref|ZP_04107163.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|228814828|gb|EEM61086.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
          Length = 788

 Score = 37.5 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%)

Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +DHI+++              ++ I  +     + SDH PV+  +D+
Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784


>gi|228951535|ref|ZP_04113640.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|228808100|gb|EEM54614.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
          Length = 788

 Score = 37.5 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%)

Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +DHI+++              ++ I  +     + SDH PV+  +D+
Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784


>gi|228957450|ref|ZP_04119204.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|228802204|gb|EEM49067.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar pakistani str. T13001]
          Length = 788

 Score = 37.5 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%)

Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +DHI+++              ++ I  +     + SDH PV+  +D+
Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784


>gi|228964133|ref|ZP_04125257.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|228795567|gb|EEM43050.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar sotto str. T04001]
          Length = 129

 Score = 37.5 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%)

Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +DHI+++              ++ I  +     + SDH PV+  +D+
Sbjct: 82  LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 125


>gi|228938309|ref|ZP_04100922.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|228971187|ref|ZP_04131818.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228977796|ref|ZP_04138180.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis Bt407]
 gi|228781906|gb|EEM30100.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis Bt407]
 gi|228788514|gb|EEM36462.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228821346|gb|EEM67358.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|326938818|gb|AEA14714.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           thuringiensis serovar chinensis CT-43]
          Length = 788

 Score = 37.5 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%)

Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +DHI+++              ++ I  +     + SDH PV+  +D+
Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784


>gi|228984258|ref|ZP_04144440.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
 gi|228775545|gb|EEM23929.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
          Length = 788

 Score = 37.5 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%)

Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +DHI+++              ++ I  +     + SDH PV+  +D+
Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784


>gi|229016371|ref|ZP_04173315.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1273]
 gi|229022601|ref|ZP_04179127.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1272]
 gi|228738692|gb|EEL89162.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1272]
 gi|228744927|gb|EEL94985.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1273]
          Length = 788

 Score = 37.5 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%)

Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +DHI+++              ++ I  +     + SDH PV+  +D+
Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784


>gi|229028860|ref|ZP_04184961.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1271]
 gi|228732431|gb|EEL83312.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1271]
          Length = 788

 Score = 37.5 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%)

Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +DHI+++              ++ I  +     + SDH PV+  +D+
Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784


>gi|229042920|ref|ZP_04190653.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH676]
 gi|228726385|gb|EEL77609.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH676]
          Length = 788

 Score = 37.5 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%)

Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +DHI+++              ++ I  +     + SDH PV+  +D+
Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784


>gi|229068731|ref|ZP_04202028.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus F65185]
 gi|228714348|gb|EEL66226.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus F65185]
          Length = 788

 Score = 37.5 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%)

Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +DHI+++              ++ I  +     + SDH PV+  +D+
Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784


>gi|229078378|ref|ZP_04210941.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock4-2]
 gi|228704919|gb|EEL57342.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock4-2]
          Length = 788

 Score = 37.5 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%)

Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +DHI+++              ++ I  +     + SDH PV+  +D+
Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784


>gi|229101774|ref|ZP_04232490.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-28]
 gi|228681641|gb|EEL35802.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-28]
          Length = 190

 Score = 37.5 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%)

Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +DHI+++              ++ I  +     + SDH PV+  +D+
Sbjct: 143 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 186


>gi|229108638|ref|ZP_04238249.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock1-15]
 gi|228674779|gb|EEL30012.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock1-15]
          Length = 788

 Score = 37.5 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%)

Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +DHI+++              ++ I  +     + SDH PV+  +D+
Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784


>gi|229120698|ref|ZP_04249941.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus 95/8201]
 gi|228662703|gb|EEL18300.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus 95/8201]
          Length = 788

 Score = 37.5 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%)

Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +DHI+++              ++ I  +     + SDH PV+  +D+
Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784


>gi|229126482|ref|ZP_04255496.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-Cer4]
 gi|228656871|gb|EEL12695.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-Cer4]
          Length = 788

 Score = 37.5 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%)

Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +DHI+++              ++ I  +     + SDH PV+  +D+
Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784


>gi|229149383|ref|ZP_04277619.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus m1550]
 gi|228634025|gb|EEK90618.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus m1550]
          Length = 788

 Score = 37.5 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%)

Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +DHI+++              ++ I  +     + SDH PV+  +D+
Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784


>gi|229154750|ref|ZP_04282865.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus ATCC 4342]
 gi|228628698|gb|EEK85410.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus ATCC 4342]
          Length = 788

 Score = 37.5 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%)

Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +DHI+++              ++ I  +     + SDH PV+  +D+
Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784


>gi|229160143|ref|ZP_04288144.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus R309803]
 gi|228623354|gb|EEK80179.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus R309803]
          Length = 788

 Score = 37.5 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%)

Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +DHI+++              ++ I  +     + SDH PV+  +D+
Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784


>gi|229171829|ref|ZP_04299400.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus MM3]
 gi|228611649|gb|EEK68900.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus MM3]
          Length = 788

 Score = 37.5 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%)

Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +DHI+++              ++ I  +     + SDH PV+  +D+
Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784


>gi|229177605|ref|ZP_04304982.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus 172560W]
 gi|228605795|gb|EEK63239.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus 172560W]
          Length = 788

 Score = 37.5 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%)

Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +DHI+++              ++ I  +     + SDH PV+  +D+
Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784


>gi|229183381|ref|ZP_04310608.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BGSC 6E1]
 gi|228600097|gb|EEK57690.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BGSC 6E1]
          Length = 788

 Score = 37.5 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%)

Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +DHI+++              ++ I  +     + SDH PV+  +D+
Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784


>gi|229195383|ref|ZP_04322152.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus m1293]
 gi|228588082|gb|EEK46131.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus m1293]
          Length = 788

 Score = 37.5 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%)

Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +DHI+++              ++ I  +     + SDH PV+  +D+
Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784


>gi|227538655|ref|ZP_03968704.1| endonuclease/exonuclease/phosphatase [Sphingobacterium spiritivorum
           ATCC 33300]
 gi|227241574|gb|EEI91589.1| endonuclease/exonuclease/phosphatase [Sphingobacterium spiritivorum
           ATCC 33300]
          Length = 258

 Score = 37.5 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 17/44 (38%), Gaps = 4/44 (9%)

Query: 218 NKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           N    ID IM++        +  +  +    +  SDH PV   L
Sbjct: 216 NPNREIDFIMVNKSKNPKFQNHTVIEE----SYASDHRPVYAEL 255


>gi|225863033|ref|YP_002748411.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus
           03BB102]
 gi|225790557|gb|ACO30774.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus 03BB102]
          Length = 788

 Score = 37.5 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%)

Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +DHI+++              ++ I  +     + SDH PV+  +D+
Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784


>gi|222094804|ref|YP_002528864.1| endonuclease/exonuclease/phosphatase [Bacillus cereus Q1]
 gi|221238862|gb|ACM11572.1| endonuclease/exonuclease/phosphatase [Bacillus cereus Q1]
          Length = 788

 Score = 37.5 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%)

Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +DHI+++              ++ I  +     + SDH PV+  +D+
Sbjct: 741 LDHILVTNNIAPHTIVDPLHLNSNIMKE---HGRVSDHDPVLAQIDL 784


>gi|206976594|ref|ZP_03237500.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus
           H3081.97]
 gi|206745277|gb|EDZ56678.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus
           H3081.97]
          Length = 788

 Score = 37.5 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%)

Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +DHI+++              ++ I  +     + SDH PV+  +D+
Sbjct: 741 LDHILVTNNIAPHTIVDPLHLNSNIMKE---HGRVSDHDPVLAQIDL 784


>gi|218896127|ref|YP_002444538.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus G9842]
 gi|218542051|gb|ACK94445.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus G9842]
          Length = 788

 Score = 37.5 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%)

Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +DHI+++              ++ I  +     + SDH PV+  +D+
Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784


>gi|218235001|ref|YP_002365840.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus B4264]
 gi|218162958|gb|ACK62950.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus B4264]
          Length = 788

 Score = 37.5 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%)

Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +DHI+++              ++ I  +     + SDH PV+  +D+
Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784


>gi|196036463|ref|ZP_03103859.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus W]
 gi|195990937|gb|EDX54909.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus W]
          Length = 788

 Score = 37.5 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%)

Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +DHI+++              ++ I  +     + SDH PV+  +D+
Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784


>gi|206968309|ref|ZP_03229265.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus
           AH1134]
 gi|206737229|gb|EDZ54376.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus
           AH1134]
          Length = 788

 Score = 37.5 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%)

Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +DHI+++              ++ I  +     + SDH PV+  +D+
Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784


>gi|217958656|ref|YP_002337204.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus AH187]
 gi|229137866|ref|ZP_04266465.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST26]
 gi|217063925|gb|ACJ78175.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus AH187]
 gi|228645523|gb|EEL01756.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST26]
          Length = 788

 Score = 37.5 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%)

Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +DHI+++              ++ I  +     + SDH PV+  +D+
Sbjct: 741 LDHILVTNNIAPHTIVDPLHLNSNIMKE---HGRVSDHDPVLAQIDL 784


>gi|52144237|ref|YP_082591.1| endonuclease/exonuclease/phosphatase [Bacillus cereus E33L]
 gi|51977706|gb|AAU19256.1| endonuclease/exonuclease/phosphatase [Bacillus cereus E33L]
          Length = 788

 Score = 37.5 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%)

Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +DHI+++              ++ I  +     + SDH PV+  +D+
Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784


>gi|42780246|ref|NP_977493.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus ATCC 10987]
 gi|42736165|gb|AAS40101.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus ATCC
           10987]
          Length = 788

 Score = 37.5 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%)

Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +DHI+++              ++ I  +     + SDH PV+  +D+
Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784


>gi|30019227|ref|NP_830858.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus ATCC 14579]
 gi|29894770|gb|AAP08059.1| Endonuclease/Exonuclease/phosphatase family protein [Bacillus
           cereus ATCC 14579]
          Length = 738

 Score = 37.5 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%)

Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +DHI+++              ++ I  +     + SDH PV+  +D+
Sbjct: 691 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 734


>gi|83954036|ref|ZP_00962756.1| endonuclease/exonuclease/phosphatase family protein [Sulfitobacter
           sp. NAS-14.1]
 gi|83841073|gb|EAP80243.1| endonuclease/exonuclease/phosphatase family protein [Sulfitobacter
           sp. NAS-14.1]
          Length = 341

 Score = 37.5 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 12/54 (22%)

Query: 223 IDHIMLSPEATSLLHSARI---DTKPRGW---------TKPSDHTPVIVSLDIP 264
           +D+IM+SP  T+     RI      P  W            SDH PV + LD+ 
Sbjct: 285 LDYIMISPALTAHRPQWRIWHPLDDPECWGDATLRDALITASDHFPVTIDLDLS 338


>gi|75759359|ref|ZP_00739455.1| Endonuclease/Exonuclease/phosphatase family protein [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|74493126|gb|EAO56246.1| Endonuclease/Exonuclease/phosphatase family protein [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
          Length = 788

 Score = 37.5 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%)

Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +DHI+++              ++ I  +     + SDH PV+  +D+
Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784


>gi|47567552|ref|ZP_00238263.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus G9241]
 gi|47555747|gb|EAL14087.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus G9241]
          Length = 788

 Score = 37.5 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%)

Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +DHI+++              ++ I  +     + SDH PV+  +D+
Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784


>gi|168021087|ref|XP_001763073.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162685556|gb|EDQ71950.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 347

 Score = 37.5 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 59/198 (29%), Gaps = 15/198 (7%)

Query: 16  ARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNG---VAILS 72
           AR   L   +   +PDI+CLQE     ++   E L+S  Y      +   +         
Sbjct: 36  ARKKKLLRELALWSPDIMCLQEVD-HYEDL-NEELESKGYVGVYTSRTGASTDGCAMFWR 93

Query: 73  KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIK 132
           K +   +       +       +     +    + +GN +L         K       ++
Sbjct: 94  KNRFELLEEECIKFNEFNLRDNVAQLCVLWNNCVVVGNTHLLFNPKRGDVKLGQARVLLE 153

Query: 133 RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192
           +    +        P+  AGD+N  P           + D         +    +N+   
Sbjct: 154 KAHAISE--KWGNAPVAIAGDFNSTPWSALYRFMSCSQLD--------LAGHDRRNISGQ 203

Query: 193 DAIRATHDTHHLYSFWDY 210
           +         + YS WD 
Sbjct: 204 EEGAKERFKTNAYSRWDQ 221


>gi|147779484|emb|CAN67711.1| hypothetical protein VITISV_020427 [Vitis vinifera]
          Length = 843

 Score = 37.5 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 7/60 (11%), Positives = 17/60 (28%), Gaps = 7/60 (11%)

Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
                ++              R+D  +++              + R     SDH P+++ 
Sbjct: 366 QGGRCTW----NGGRGSQSWARLDRFLVTQNWLDHFSGVV---QSRLPRPTSDHFPILLE 418


>gi|189464629|ref|ZP_03013414.1| hypothetical protein BACINT_00972 [Bacteroides intestinalis DSM
           17393]
 gi|189436903|gb|EDV05888.1| hypothetical protein BACINT_00972 [Bacteroides intestinalis DSM
           17393]
          Length = 356

 Score = 37.5 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 35/248 (14%), Positives = 74/248 (29%), Gaps = 42/248 (16%)

Query: 20  NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEI 79
            +   + + + D++ L E + + K F    ++ L    +    ++++    +      + 
Sbjct: 47  GIIDVLDQMDADVVFLCEVR-DGKRFIPHVIEELKKRGKHYYGETFDLAIGILSKFKPDS 105

Query: 80  VTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWI-------- 131
           +T       D     ++ T TI  Q +   + +L + N           +          
Sbjct: 106 MTKCCIVPGDESRAMVKMTTTIEGQPVSFYSCHLDYRNYECYMPRGYSGTSWKKIDNPIT 165

Query: 132 ------------------KRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
                               F++     ++   P+I  GD+N  P   D         D 
Sbjct: 166 DESEVLKANRLSFRDESIHAFVQEVQTDIKQGRPVIMGGDFN-EPSHLDWQADTKNLWDH 224

Query: 174 CFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD------------SW--SKNK 219
              +        L   GF D+ R  +     Y  + + A             +W    ++
Sbjct: 225 NGAVIHWDCSMMLHEAGFKDSYREKYPNPVRYPGFTFPAGNKLAEEAKLEKLAWAPEADE 284

Query: 220 GIRIDHIM 227
             RID I 
Sbjct: 285 RDRIDFIY 292


>gi|169617934|ref|XP_001802381.1| hypothetical protein SNOG_12150 [Phaeosphaeria nodorum SN15]
 gi|182676428|sp|Q0U7W4|CCR4_PHANO RecName: Full=Glucose-repressible alcohol dehydrogenase
           transcriptional effector; AltName: Full=Carbon
           catabolite repressor protein 4; AltName:
           Full=Cytoplasmic deadenylase
 gi|160703518|gb|EAT80562.2| hypothetical protein SNOG_12150 [Phaeosphaeria nodorum SN15]
          Length = 597

 Score = 37.5 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 23/59 (38%), Gaps = 5/59 (8%)

Query: 16  ARIHNLAAWIKENNPDIICLQETKTEDKNFP---FETLQSLNYHIETCGQKSYNGVAIL 71
            R   +   +K+ N DI+CLQE   +  +F     E L   +Y      +     +A  
Sbjct: 251 TRRELILGELKQRNADIVCLQEI--DQDSFNEYFREKLAHYDYKGVFWPKSRARTMAER 307


>gi|50551685|ref|XP_503317.1| YALI0D26444p [Yarrowia lipolytica]
 gi|49649185|emb|CAG81523.1| YALI0D26444p [Yarrowia lipolytica]
          Length = 1301

 Score = 37.5 bits (85), Expect = 2.0,   Method: Composition-based stats.
 Identities = 33/262 (12%), Positives = 71/262 (27%), Gaps = 15/262 (5%)

Query: 4   VTVATWNVNSIRAR--IHNLAAWI-----KENNPDIICLQETKTEDKNF-PFETLQSLNY 55
           V V T N+   +    ++ L   I       + PD++ LQET   D +    + + S + 
Sbjct: 26  VKVITANIGGFKMAEALNRLPDTIVNIIRTTHYPDLVLLQETNWVDSSLQTAQQIISNSP 85

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
           +            A +S       + +     +       E    ++ +           
Sbjct: 86  YPGGRHYTLLGSTAGVSNRSVGVGLVYSDNVTITNFTTVFEYFPALDNRLCLADVHIKGT 145

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
              ++                       L++ L        +    D       +     
Sbjct: 146 DRHLSLINVYAPNEQGASPFTNRQFYQSLDDYLRLHPCQYPLIAAGDWNAVASNDGRIGE 205

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            +                    +     LY+  +    +     G R+D + +S   +  
Sbjct: 206 KVTTHLKDFLANWDLLDTYTLISKHRKGLYTHTNNSRGA-----GRRLDQLHISSTLSQW 260

Query: 236 LHSARIDTKPRGW--TKPSDHT 255
           + S ++ T  +G   TK S H 
Sbjct: 261 IKSTQLVTNKQGHNITKSSHHA 282


>gi|319427362|gb|ADV55436.1| Endonuclease/exonuclease/phosphatase [Shewanella putrefaciens 200]
          Length = 396

 Score = 37.5 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 17/53 (32%)

Query: 21  LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSK 73
           L+ +I    PDI+  QE  + +        Q L Y          +     S 
Sbjct: 59  LSEFIAHRQPDIVGFQEVFSPEPLKRIAREQGLGYFAVVDEPTLISDYIYRSP 111


>gi|86138524|ref|ZP_01057097.1| endonuclease/exonuclease/phosphatase family protein [Roseobacter
           sp. MED193]
 gi|85824584|gb|EAQ44786.1| endonuclease/exonuclease/phosphatase family protein [Roseobacter
           sp. MED193]
          Length = 331

 Score = 37.5 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 18/53 (33%), Gaps = 12/53 (22%)

Query: 223 IDHIMLSPEATSL---------LHSARIDTKPRGWTK---PSDHTPVIVSLDI 263
           +D+IM+S    +             A               SDH PV + L++
Sbjct: 278 LDYIMISHGLEAYGPHWRIWHPFEDAECYDDIPLREALLAASDHFPVSLDLEL 330


>gi|146294023|ref|YP_001184447.1| endonuclease/exonuclease/phosphatase [Shewanella putrefaciens
           CN-32]
 gi|145565713|gb|ABP76648.1| Endonuclease/exonuclease/phosphatase [Shewanella putrefaciens
           CN-32]
          Length = 396

 Score = 37.5 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 17/53 (32%)

Query: 21  LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSK 73
           L+ +I    PDI+  QE  + +        Q L Y          +     S 
Sbjct: 59  LSEFIAHRQPDIVGFQEVFSPEPLKRIAREQGLGYFAVVDEPTLISDYIYRSP 111


>gi|327538463|gb|EGF25127.1| endonuclease/exonuclease/phosphatase [Rhodopirellula baltica WH47]
          Length = 406

 Score = 37.5 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 29/57 (50%), Gaps = 6/57 (10%)

Query: 215 WSKNKGIRIDHIMLSPEATSLLHSARIDTKPR----GWTKPSDHTPVIVSLDIPEPR 267
           + +N+ IR+D+++ S     ++ SA +    +       + +DH  V + ++ P P+
Sbjct: 352 FGRNE-IRVDYVLPSSNL-HVIRSAVVWPDAQTDLGKRVRATDHRMVWIDIERPSPQ 406


>gi|302556768|ref|ZP_07309110.1| secreted protein [Streptomyces griseoflavus Tu4000]
 gi|302474386|gb|EFL37479.1| secreted protein [Streptomyces griseoflavus Tu4000]
          Length = 295

 Score = 37.5 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 7/42 (16%)

Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           RID I +SP     +  AR        T+ SDH PV+  L I
Sbjct: 256 RIDLITVSPGIG--VRDAR-----TVATEASDHRPVVADLTI 290


>gi|258648749|ref|ZP_05736218.1| endonuclease/Exonuclease/phosphatase family protein [Prevotella
           tannerae ATCC 51259]
 gi|260851066|gb|EEX70935.1| endonuclease/Exonuclease/phosphatase family protein [Prevotella
           tannerae ATCC 51259]
          Length = 337

 Score = 37.5 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 35/286 (12%), Positives = 73/286 (25%), Gaps = 49/286 (17%)

Query: 15  RARIHNLAAWIKE----NNPDIICLQET---KTEDKNFPFETLQSLNYHIETCGQKSYNG 67
           RA++  +A+ I        P ++ L E    +  +       L S NY           G
Sbjct: 60  RAKLSRIASVIAGVGEMQPPKLVALCEVENARVIEDLLHHTRLHSFNYRYCMTESADRRG 119

Query: 68  VAIL-----------SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
           + +                   I  +   +             + +T ++ + +L    G
Sbjct: 120 IDVALLYQPSTFHLLYMDTLRVIPANKHENPTRDILHVCGLVPSGDTLSVFVVHLPSRRG 179

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
               +  Y  +++   R       R   +  ++  GD+N           +         
Sbjct: 180 GVRRTMPYRCRVAQRLRQEIDGLTRNGRDRKVVIMGDFNDEHTDPSIATVLE-ARKWTDA 238

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLL 236
           ++         ++   + I+ TH        W               D ++ +    +  
Sbjct: 239 IQPPFLCVLTADLKAANGIQGTHKFQGR---WAQLDQIIVN------DRLLTTEGLHTSP 289

Query: 237 HSARIDTKP---------------------RGWTKPSDHTPVIVSL 261
               I T                             SDH PV+V  
Sbjct: 290 KDCFIFTDAPLLKYDAGDHGVVPYRSFLGSFYQGGFSDHLPVVVDF 335


>gi|229125430|ref|ZP_04254492.1| hypothetical protein bcere0016_56560 [Bacillus cereus 95/8201]
 gi|228658006|gb|EEL13784.1| hypothetical protein bcere0016_56560 [Bacillus cereus 95/8201]
          Length = 237

 Score = 37.5 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 32/261 (12%), Positives = 74/261 (28%), Gaps = 27/261 (10%)

Query: 4   VTVATWNVNS--IRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + +  WN      R +I  +         DI+ + E   + + +     +   Y     G
Sbjct: 1   MKIVAWN-AGMAFRKKIDKILPL----KADILIISEC-EQPEKWGQIDKEKGIYKFLWEG 54

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
                G+ I++  +  +I  H            +    + + Q   +  ++   G    S
Sbjct: 55  DNPNKGIGIITFDKRYKIEIHPE--YDKSFRYIVPIKVSADNQEFIMFAVWSQKGEKRYS 112

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
           +        ++++     +   +         ++ I +       I +           Q
Sbjct: 113 SYIGQIYLALEKYASLLKEPCIIVGDWNSNKVFDYIKRVKTHSEVIGFLEAFGIKSAYHQ 172

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
            F++ Q            +    +                 ID +  S    + L S  I
Sbjct: 173 FFEEEQGEELKATHYFRKEKVRPFH----------------IDCLFASDIFLNKLESIEI 216

Query: 242 DTKPRGWTKPSDHTPVIVSLD 262
            +    W + SDH P+    +
Sbjct: 217 GSYE-EWIEFSDHMPLSAEFN 236


>gi|3046704|emb|CAA18234.1| putative protein [Arabidopsis thaliana]
 gi|7269488|emb|CAB79491.1| putative protein [Arabidopsis thaliana]
          Length = 1141

 Score = 37.5 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 31/67 (46%), Gaps = 6/67 (8%)

Query: 205 YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
           +++W+    S ++    +ID I+++   ++L  S+       G    SDH    V L++ 
Sbjct: 180 FTWWN---KSKTRPVAKKIDRILVNESWSNLFPSSF---GLFGPPDFSDHASCGVVLELD 233

Query: 265 EPRKKQQ 271
             + K+ 
Sbjct: 234 PIKAKRP 240


>gi|326480264|gb|EGE04274.1| endonuclease/exonuclease/phosphatase [Trichophyton equinum CBS
           127.97]
          Length = 292

 Score = 37.5 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 42/297 (14%), Positives = 81/297 (27%), Gaps = 53/297 (17%)

Query: 3   VVTVATWNVN-------------SIRARIHNLAAWIK---ENNPD-IICLQETKTEDKNF 45
           +  + T N+              S+RA   ++   +      NP+  +CLQE        
Sbjct: 7   LFRILTHNIRYATTSPSAGEQPWSVRA--PHIVNELDYHSRLNPESFVCLQE--ALHNQV 62

Query: 46  PF------------ETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR 93
                         ET Q   Y +     K     + +     +  +       L     
Sbjct: 63  TDVLAGLNSRPHAAETDQWAYYGVGRDDGKQAGEYSPIFYRPAVWTLQEKETVWLSETPS 122

Query: 94  FIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGD 153
                +   +  +    ++    + IT    +  +       RF S +L L     +   
Sbjct: 123 VPSKGWDAASIRIVTIGVFNHKSSNITVLAMNTHLDDQGSKSRFESAKLILSLIQKYLAR 182

Query: 154 YNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD 213
                + +                E  +    + +          +     ++ +D    
Sbjct: 183 -YPEVKGNFLAGDFNSIESQEAYREFTKPGSSIVDTYKKVPAAQHYGDEITFTGFD---- 237

Query: 214 SWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP----------SDHTPVIVS 260
              K KG RID++M+ P+      SA I     G+             SDH  V+  
Sbjct: 238 --GKTKGSRIDYVMVGPQ---SCSSASIPFTVNGYAVMPNRFDNRIYNSDHRAVVAD 289


>gi|325181728|emb|CCA16183.1| AlNc14C19G1963 [Albugo laibachii Nc14]
          Length = 196

 Score = 37.5 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 57/205 (27%), Gaps = 24/205 (11%)

Query: 33  ICLQETKTEDKNFPFET-----LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDD 87
           I LQET+  + +   +      +   N  +        +G   +                
Sbjct: 2   IALQETRLSNDDNQRKNDRFIRIVDANARVFWFPISEASGHNGVGLILSSHHPFG----- 56

Query: 88  LDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEP 147
             V    +    +++   L +    +     +        +     F +           
Sbjct: 57  PIVNVTSLHINQSVHDPYLLLDTSIMSQRIWMHVVYAPSHLPERLSFFQSLPHDGPAGLQ 116

Query: 148 LIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF 207
            I  GD+++   P    +            ++    +    MG TDA R TH     Y+ 
Sbjct: 117 HIVLGDFDVPLNPTLDSSKQRHSGA-----DIEALPRWTMQMGLTDAWRTTHPYFKEYT- 170

Query: 208 WDYYADSWSKNKGIRIDHIMLSPEA 232
                    +N   RID+  LS E 
Sbjct: 171 -----GPRRRN---RIDYCFLSSEL 187


>gi|313237482|emb|CBY19922.1| unnamed protein product [Oikopleura dioica]
          Length = 391

 Score = 37.5 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 27/236 (11%), Positives = 58/236 (24%), Gaps = 36/236 (15%)

Query: 2   SVVTVATWNVNSI------R--------ARIHNLAAW----------IKENNPDIICLQE 37
           S   +++WN+  +      R        A    L  W          IKE + D++CLQE
Sbjct: 44  SKFRLSSWNI--LAQDYADRCSHLYGHLASKKQLLNWPVRWTKISDEIKELDSDVLCLQE 101

Query: 38  TKTEDKNFPFETL-QSLNYHIETCGQKS--------YNGVAILSKYQPIEIVTHLPGDDL 88
            ++           + L Y      +++        +              + H      
Sbjct: 102 VQSSCYESEVRPFLERLRYKCRYLQKRNLPDGSLIAFKEGIFKKVLTKEIHMWHPDKCPT 161

Query: 89  DVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPL 148
                 +      + + + +   +L         K    +  +             +  +
Sbjct: 162 GQIGLLVLLEHVKSGKMILVSTTHLVFNPYRGDWKLKQIMEILAEIHEILRNSR-QKPAV 220

Query: 149 IFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL 204
           +  GD N  P        +  + D         + Q        +     H     
Sbjct: 221 VLCGDLNSQPHSSLVQFLLNKKFDLSGIRARDIAQQDYDFSRQYNYYGRRHSHVGR 276


>gi|169787424|gb|ACA80151.1| putative DNA lyase [Glomerella graminicola]
          Length = 233

 Score = 37.5 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 22/57 (38%)

Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81
           +    DI+ +QETK + K+   + +    + +     K   G + ++ Y       
Sbjct: 2  FEILEADIVIMQETKIQRKDLRDDMVLVPGWDVFFSLPKHKKGYSGVAIYTRNAKCC 58


>gi|169787422|gb|ACA80150.1| putative DNA lyase [Glomerella graminicola]
          Length = 233

 Score = 37.5 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 22/57 (38%)

Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81
           +    DI+ +QETK + K+   + +    + +     K   G + ++ Y       
Sbjct: 2  FEILEADIVIMQETKIQRKDLRDDMVLVPGWDVFFSLPKHKKGYSGVAIYTRNAKCC 58


>gi|169787420|gb|ACA80149.1| putative DNA lyase [Glomerella graminicola]
 gi|169787426|gb|ACA80152.1| putative DNA lyase [Glomerella graminicola]
 gi|169787428|gb|ACA80153.1| putative DNA lyase [Glomerella graminicola]
          Length = 233

 Score = 37.5 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 22/57 (38%)

Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81
           +    DI+ +QETK + K+   + +    + +     K   G + ++ Y       
Sbjct: 2  FEILEADIVIMQETKIQRKDLRDDMVLVPGWDVFFSLPKHKKGYSGVAIYTRNAKCC 58


>gi|169787364|gb|ACA80121.1| putative DNA lyase [Glomerella graminicola]
          Length = 233

 Score = 37.5 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 22/57 (38%)

Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81
           +    DI+ +QETK + K+   + +    + +     K   G + ++ Y       
Sbjct: 2  FEILEADIVIMQETKIQRKDLRDDMVLVPGWDVFFSLPKHKKGYSGVAIYTRNAKCC 58


>gi|169787362|gb|ACA80120.1| putative DNA lyase [Glomerella graminicola]
          Length = 233

 Score = 37.5 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 22/57 (38%)

Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81
           +    DI+ +QETK + K+   + +    + +     K   G + ++ Y       
Sbjct: 2  FEILEADIVIMQETKIQRKDLRDDMVLVPGWDVFFSLPKHKKGYSGVAIYTRNAKCC 58


>gi|169787354|gb|ACA80116.1| putative DNA lyase [Glomerella graminicola]
 gi|169787356|gb|ACA80117.1| putative DNA lyase [Glomerella graminicola]
 gi|169787358|gb|ACA80118.1| putative DNA lyase [Glomerella graminicola]
 gi|169787360|gb|ACA80119.1| putative DNA lyase [Glomerella graminicola]
 gi|169787400|gb|ACA80139.1| putative DNA lyase [Glomerella graminicola]
 gi|169787402|gb|ACA80140.1| putative DNA lyase [Glomerella graminicola]
 gi|169787404|gb|ACA80141.1| putative DNA lyase [Glomerella graminicola]
 gi|169787406|gb|ACA80142.1| putative DNA lyase [Glomerella graminicola]
 gi|169787408|gb|ACA80143.1| putative DNA lyase [Glomerella graminicola]
 gi|169787466|gb|ACA80172.1| putative DNA lyase [Glomerella graminicola]
 gi|169787468|gb|ACA80173.1| putative DNA lyase [Glomerella graminicola]
          Length = 233

 Score = 37.5 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 22/57 (38%)

Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81
           +    DI+ +QETK + K+   + +    + +     K   G + ++ Y       
Sbjct: 2  FEILEADIVIMQETKIQRKDLRDDMVLVPGWDVFFSLPKHKKGYSGVAIYTRNAKCC 58


>gi|53803236|ref|YP_115006.1| endonuclease/exonuclease/phosphatase family protein [Methylococcus
           capsulatus str. Bath]
 gi|53756997|gb|AAU91288.1| endonuclease/exonuclease/phosphatase family protein [Methylococcus
           capsulatus str. Bath]
          Length = 282

 Score = 37.5 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 31/284 (10%), Positives = 65/284 (22%), Gaps = 61/284 (21%)

Query: 3   VVTVATWNVN--------------SIR------ARIHNLAAWIKENNP-DIICLQETKTE 41
           V+ +A++N+                 R       R+ NL    +   P DI  LQE    
Sbjct: 27  VLRLASFNIQTGISTSSYRDYITGGWRHVWPSTKRLPNLNRIAQLLEPFDIAGLQEV--- 83

Query: 42  DKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI 101
                                    G+   +  Q   +  H        Q         +
Sbjct: 84  ----------------------DGGGMRSHNIVQTQYLAEHAGFAYWHNQVNRRIGRLAL 121

Query: 102 NTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161
           ++  L          +              +      +        L  +    +     
Sbjct: 122 HSNGLLSRIRPDFVHDYPLPGMPGRGALLARFGRDPRNALYVCVAHLALSRRARLKQLRF 181

Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI 221
                              +      ++              L +F  +           
Sbjct: 182 ISDLIGHLPYVVMMGDLNCEPNTPELDLLLDATHLN-DPVCRLKTFPSWRPHKM------ 234

Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
            +DHI+++P     ++   +          SDH PV + + +P+
Sbjct: 235 -LDHILVTPSL--RVNRLEVIDFA-----CSDHLPVSMEVVLPD 270


>gi|24380384|ref|NP_722339.1| hypothetical protein SMU.2046c [Streptococcus mutans UA159]
 gi|24378406|gb|AAN59645.1|AE015027_3 conserved hypothetical protein [Streptococcus mutans UA159]
          Length = 273

 Score = 37.5 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 35/269 (13%), Positives = 86/269 (31%), Gaps = 22/269 (8%)

Query: 3   VVTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57
           +V + T N +S      + ++  L   I EN+ D+IC+QE    ++    E  + L  + 
Sbjct: 1   MVKLLTINSHSWMEEDPQKKLEILGKTILENDYDVICVQEV---NQLLHSEPAKDLPNYC 57

Query: 58  ET-----CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIE-----ATFTINTQTLR 107
           +        + +Y    +    +   +       +     RF E     +   + +Q + 
Sbjct: 58  QVAGTPAIHKDNYALQLVTFLLEQERVYYWSWAYNHIGYDRFQEGVAILSKTPLVSQGIL 117

Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167
           I ++   H                +     +       +      +  +     +   P+
Sbjct: 118 ISDVDDEHDYHTRRALLGKTKIDQEDIAIVSLHMSWWNKGFQGEWN-KLERVLSNLKLPL 176

Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK-GIRIDHI 226
           +   D     E       L++         +    +  +      D W  N+  +++D++
Sbjct: 177 LLMGDFNNPYENEGYQAILKSSLKLQDSHQSAKITYGKATIQKEIDGWQGNQEALKVDYV 236

Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHT 255
            LS +    +  + +    + +   SDH 
Sbjct: 237 FLSSDW--QVEKSEVIFDGKHYPMISDHC 263


>gi|37676826|ref|NP_937222.1| putative phospholipase C precursor [Vibrio vulnificus YJ016]
 gi|37201370|dbj|BAC97192.1| putative phospholipase C precursor [Vibrio vulnificus YJ016]
          Length = 378

 Score = 37.5 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 24/146 (16%), Positives = 49/146 (33%), Gaps = 18/146 (12%)

Query: 4   VTVATWNVNSIRA-------RIHNLAAWIKENNPDIICLQETKTE-DKNFPFETLQSLNY 55
           + + T+N+ ++ A       R   +  ++K    D++ LQE        F  E  +   Y
Sbjct: 178 LKIMTYNIWALPAIASHIDERFELIPDYVK--GYDVLALQEVFANGRGAFLRELAKEYPY 235

Query: 56  HIETCGQKSYN----GVAILSKYQPI----EIVTHLPGDDLDVQARFIEATFTINTQTLR 107
             +   +  +N    GV I+S+Y  +     +     G D         A      +   
Sbjct: 236 QTKMLDKDGFNIYDGGVIIVSRYPIVNQAQFVFPDCTGTDCFADKGVNYAEVIKGGEAYH 295

Query: 108 IGNLYLPHGNPITSTKYDDKISWIKR 133
           +   +    +  T+  Y  +     R
Sbjct: 296 VFATHTASYDTDTARDYRQRQFKQMR 321


>gi|297727473|ref|NP_001176100.1| Os10g0351414 [Oryza sativa Japonica Group]
 gi|255679325|dbj|BAH94828.1| Os10g0351414 [Oryza sativa Japonica Group]
          Length = 912

 Score = 37.5 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 25/253 (9%), Positives = 58/253 (22%), Gaps = 28/253 (11%)

Query: 18  IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPI 77
           + +L   I   N  +I + ETK+                             ++  +   
Sbjct: 10  MQHLQRLIYSTNAKVIFISETKSS----------------------KVTASDLIHHFHVA 47

Query: 78  EIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRF 137
                             +    +      I  +        +   ++    +     R 
Sbjct: 48  NSHVVPVDQASGGLWLMWDEDMDLTIVQSSINYILAYGVYKNSGPIFNLLCIYGDPSHRA 107

Query: 138 ASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRA 197
            S         +    +       D    +            +      ++      +  
Sbjct: 108 TSAMWSEISSFVVHSSHKPTFCMGDLNEIMHANEKYGLAPPNQNRINIFKHHVNNLGLMD 167

Query: 198 THDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257
                  Y+ W             R+D  + + E      +  +   P      SDH P+
Sbjct: 168 MGYNGPAYT-WSNKQQGKDL-VLERLDRCLANVEWCFNYPNTTVYHLPM---LYSDHAPI 222

Query: 258 IVSLDIPEPRKKQ 270
           I  L+ P+ R+ +
Sbjct: 223 IAILN-PKNRRPK 234


>gi|147777299|emb|CAN66801.1| hypothetical protein VITISV_015403 [Vitis vinifera]
          Length = 965

 Score = 37.5 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 20/60 (33%), Gaps = 7/60 (11%)

Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
               +++              R+D  M+S        +    T+ R     SDH P+++ 
Sbjct: 202 QGGSFTW----GGGLHNQAWARLDRFMVSSSWLDQFSNV---TQKRLSWPISDHFPILIE 254


>gi|127511624|ref|YP_001092821.1| endonuclease/exonuclease/phosphatase [Shewanella loihica PV-4]
 gi|126636919|gb|ABO22562.1| Endonuclease/exonuclease/phosphatase [Shewanella loihica PV-4]
          Length = 357

 Score = 37.5 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 13/61 (21%)

Query: 218 NKGIRIDHIMLSPEATSLLHSA--------RIDTKP----RGWTKPS-DHTPVIVSLDIP 264
           N+G  ID+I+LS E     H            D+            S DH PV+VSL I 
Sbjct: 297 NRGEVIDYILLSNEFDPHNHQCLAQVSQYHTYDSHLINPQYDRDSHSTDHAPVMVSLKIR 356

Query: 265 E 265
           E
Sbjct: 357 E 357


>gi|330960376|gb|EGH60636.1| endonuclease/exonuclease/phosphatase [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 261

 Score = 37.5 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 32/271 (11%), Positives = 66/271 (24%), Gaps = 41/271 (15%)

Query: 7   ATWNV---N-----SI---RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55
            + NV   N      I   R  +  L   ++  + DI+ LQE                  
Sbjct: 18  VSLNVLTMNMHMGFGIFNRRFILPELREAVRSVSADIVFLQEV----------------- 60

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
                 Q     V         E +      D       +          L      +  
Sbjct: 61  --HGEQQSHARSVKGWPTISQYEFLADAMWSDFAYGRNAVYPDGDHGNALLS--KYPIIQ 116

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
              +  +    +   +   +        +    +  G +    +        +       
Sbjct: 117 HENLDISIDGTEQRGLLHCILDVPNAGRVHAVCVHLGLFESHRRQQLKLLAELMARLPEG 176

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIML--SPEA 232
              +               ++ T         +   A S+  +   +R+D + +  S   
Sbjct: 177 EPVIVAGDFNDWRQRADALLQGTGLYEVFVEHFGAPAKSFPARLPLLRLDRVYVRNSTSH 236

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              + S+      R W+  SDH P+ V L +
Sbjct: 237 RPKVLSS------RPWSHLSDHAPLAVELTL 261


>gi|156328698|ref|XP_001618979.1| hypothetical protein NEMVEDRAFT_v1g231585 [Nematostella vectensis]
 gi|156201151|gb|EDO26879.1| predicted protein [Nematostella vectensis]
          Length = 409

 Score = 37.5 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 15/179 (8%), Positives = 38/179 (21%), Gaps = 8/179 (4%)

Query: 31  DIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDV 90
           D+IC QE K E + F  + +        +      +      +       +      L +
Sbjct: 25  DLICPQEIKVEPELFDLKGITEE----VSKALNLSDKPHKCDECGKCFTQSGTLKTHLRI 80

Query: 91  QARFIEATFTINTQTLR----IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEE 146
             +       +  +       +    + H         +    + +     A   +   +
Sbjct: 81  HTKVKPYECEVCGKCFTRKTHLKTHLMVHSGQKPYKCDECGKCFTQHAHLKAHLVIHSGK 140

Query: 147 PLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY 205
                 +              +  +      E     +     G        H     Y
Sbjct: 141 KPYKCDECGKCFTLSGDLKTHLVIHSGEKPYECDDCGKCFTQSGAMKRHLRIHTGKKPY 199


>gi|50547863|ref|XP_501401.1| YALI0C03498p [Yarrowia lipolytica]
 gi|50548455|ref|XP_501697.1| YALI0C10868p [Yarrowia lipolytica]
 gi|50549073|ref|XP_502007.1| YALI0C19305p [Yarrowia lipolytica]
 gi|50549121|ref|XP_502031.1| YALI0C19888p [Yarrowia lipolytica]
 gi|50555059|ref|XP_504938.1| YALI0F03245p [Yarrowia lipolytica]
 gi|49647268|emb|CAG81700.1| YALI0C03498p [Yarrowia lipolytica]
 gi|49647564|emb|CAG82006.1| YALI0C10868p [Yarrowia lipolytica]
 gi|49647874|emb|CAG82327.1| YALI0C19305p [Yarrowia lipolytica]
 gi|49647898|emb|CAG82351.1| YALI0C19888p [Yarrowia lipolytica]
 gi|49650808|emb|CAG77745.1| YALI0F03245p [Yarrowia lipolytica]
          Length = 1300

 Score = 37.5 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 33/262 (12%), Positives = 71/262 (27%), Gaps = 15/262 (5%)

Query: 4   VTVATWNVNSIRAR--IHNLAAWI-----KENNPDIICLQETKTEDKNF-PFETLQSLNY 55
           V V T N+   +    ++ L   I       + PD++ LQET   D +    + + S + 
Sbjct: 26  VKVITANIGGFKMAEALNRLPDTIVNIIRTTHYPDLVLLQETNWVDSSLQTAQQIISNSP 85

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
           +            A +S       + +     +       E    ++ +           
Sbjct: 86  YPGGRHYTLLGSTAGVSNRSVGVGLVYSDNVTITNFTTVFEYFPALDNRLCLADVHIKGT 145

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
              ++                       L++ L        +    D       +     
Sbjct: 146 DRHLSLINVYAPNEQGASPFTNRQFYQSLDDYLRLHPCQYPLIAAGDWNAVASNDGRIGE 205

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            +                    +     LY+  +    +     G R+D + +S   +  
Sbjct: 206 KVTTHLKDFLANWDLLDTYTLISKHRKGLYTHTNNSRGA-----GRRLDQLHISSTLSQW 260

Query: 236 LHSARIDTKPRGW--TKPSDHT 255
           + S ++ T  +G   TK S H 
Sbjct: 261 IKSTQLVTNKQGHNITKSSHHA 282


>gi|50543562|ref|XP_499947.1| YALI0A10527p [Yarrowia lipolytica]
 gi|50549709|ref|XP_502325.1| YALI0D02431p [Yarrowia lipolytica]
 gi|49645812|emb|CAG83876.1| YALI0A10527p [Yarrowia lipolytica]
 gi|49648193|emb|CAG80513.1| YALI0D02431p [Yarrowia lipolytica]
          Length = 1300

 Score = 37.5 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 33/262 (12%), Positives = 71/262 (27%), Gaps = 15/262 (5%)

Query: 4   VTVATWNVNSIRAR--IHNLAAWI-----KENNPDIICLQETKTEDKNF-PFETLQSLNY 55
           V V T N+   +    ++ L   I       + PD++ LQET   D +    + + S + 
Sbjct: 26  VKVITANIGGFKMAEALNRLPDTIVNIIRTTHYPDLVLLQETNWVDSSLQTAQQIISNSP 85

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
           +            A +S       + +     +       E    ++ +           
Sbjct: 86  YPGGRHYTLLGSTAGVSNRSVGVGLVYSDNVTITNFTTVFEYFPALDNRLCLADVHIKGT 145

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
              ++                       L++ L        +    D       +     
Sbjct: 146 DRHLSLINVYAPNEQGASPFTNRQFYQSLDDYLRLHPCQYPLIAAGDWNAVASNDGRIGE 205

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            +                    +     LY+  +    +     G R+D + +S   +  
Sbjct: 206 KVTTHLKDFLANWDLLDTYTLISKHRKGLYTHTNNSRGA-----GRRLDQLHISSTLSQW 260

Query: 236 LHSARIDTKPRGW--TKPSDHT 255
           + S ++ T  +G   TK S H 
Sbjct: 261 IKSTQLVTNKQGHNITKSSHHA 282


>gi|50543342|ref|XP_499837.1| YALI0A07238p [Yarrowia lipolytica]
 gi|50549987|ref|XP_502466.1| YALI0D05973p [Yarrowia lipolytica]
 gi|49645702|emb|CAG83763.1| YALI0A07238p [Yarrowia lipolytica]
 gi|49648334|emb|CAG80654.1| YALI0D05973p [Yarrowia lipolytica]
          Length = 1300

 Score = 37.5 bits (85), Expect = 2.1,   Method: Composition-based stats.
 Identities = 33/262 (12%), Positives = 71/262 (27%), Gaps = 15/262 (5%)

Query: 4   VTVATWNVNSIRAR--IHNLAAWI-----KENNPDIICLQETKTEDKNF-PFETLQSLNY 55
           V V T N+   +    ++ L   I       + PD++ LQET   D +    + + S + 
Sbjct: 26  VKVITANIGGFKMAEALNRLPDTIVNIIRTTHYPDLVLLQETNWVDSSLQTAQQIISNSP 85

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
           +            A +S       + +     +       E    ++ +           
Sbjct: 86  YPGGRHYTLLGSTAGVSNRSVGVGLVYSDNVTITNFTTVFEYFPALDNRLCLADVHIKGT 145

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
              ++                       L++ L        +    D       +     
Sbjct: 146 DRHLSLINVYAPNEQGASPFTNRQFYQSLDDYLRLHPCQYPLIAAGDWNAVASNDGRIGE 205

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSL 235
            +                    +     LY+  +    +     G R+D + +S   +  
Sbjct: 206 KVTTHLKDFLANWDLLDTYTLISKHRKGLYTHTNNSRGA-----GRRLDQLHISSTLSQW 260

Query: 236 LHSARIDTKPRGW--TKPSDHT 255
           + S ++ T  +G   TK S H 
Sbjct: 261 IKSTQLVTNKQGHNITKSSHHA 282


>gi|312892184|ref|ZP_07751681.1| Endonuclease/exonuclease/phosphatase [Mucilaginibacter paludis DSM
           18603]
 gi|311295314|gb|EFQ72486.1| Endonuclease/exonuclease/phosphatase [Mucilaginibacter paludis DSM
           18603]
          Length = 369

 Score = 37.5 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 33/282 (11%), Positives = 77/282 (27%), Gaps = 47/282 (16%)

Query: 4   VTVATWNVNSIRAR------IHNLAAWIKENNPDIICLQE----TK---TEDKNFPFETL 50
           + +  +NV+S             + + ++E  PD I ++E     K       +      
Sbjct: 108 IRMMAYNVHSFSNAQTNASSAQQIVSLVREQQPDFINMEEFYSFAKGKFAMCDSIKAALQ 167

Query: 51  QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
               ++    G  +  G   +    PI     +         + I      + +  R+  
Sbjct: 168 TPYYFYQPFSGTLAAGGGLAIFSKFPIIHQGVIRLTQDYSDTKAIFIDVKKDDKIFRVYC 227

Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170
           ++L                 +         +  +                      ++ +
Sbjct: 228 VHLQS-------FLLTAEDHVYMDSVSQKGKTNIRSSKRIVSKLKAAFIHRSAQVTMMKD 280

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI-R------- 222
           + A        +             + +    + +           K +G+ R       
Sbjct: 281 HMAQCPYPYIVAGDFNDTPSSYAVNQMSKGIKNAF---------REKGRGLGRTYNGDIP 331

Query: 223 ---IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
              ID+I++SP+   +L+   I+       K SDH P+   L
Sbjct: 332 NYQIDYILVSPQF-DVLNYTVIEK------KLSDHYPIRSDL 366


>gi|212224424|ref|YP_002307660.1| membrane-bound metal-dependent hydrolase, C-terminus [Thermococcus
           onnurineus NA1]
 gi|212009381|gb|ACJ16763.1| membrane-bound metal-dependent hydrolase, C-terminus [Thermococcus
           onnurineus NA1]
          Length = 56

 Score = 37.5 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 19/42 (45%), Gaps = 4/42 (9%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
           IDHI+L  +  + +             + SDH P+   +++P
Sbjct: 19  IDHILLKKDWPAKVKDYGCLCDV----EVSDHRPIWAVIELP 56


>gi|242827035|ref|XP_002488755.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
 gi|218712147|gb|EED11574.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
          Length = 301

 Score = 37.5 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 22/60 (36%), Gaps = 5/60 (8%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKP-SDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
           ID   LS    + L    I  +     +  SDH P+ + +DI  P  +     +     +
Sbjct: 188 IDLTFLSTSLFNRL----ILHERADEIQHDSDHRPIRMQIDIDTPTYELPHRRNWAATSV 243


>gi|139436883|ref|ZP_01771043.1| Hypothetical protein COLAER_00014 [Collinsella aerofaciens ATCC
           25986]
 gi|133776530|gb|EBA40350.1| Hypothetical protein COLAER_00014 [Collinsella aerofaciens ATCC
           25986]
          Length = 1098

 Score = 37.5 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 14/169 (8%), Positives = 43/169 (25%), Gaps = 5/169 (2%)

Query: 60  CGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPI 119
              ++ + +     Y  ++                      I+ +               
Sbjct: 747 FKHRNADWLEKYCVYMAVKKYFEGESRHDWPADVARYNEHLIDDKRF----HNEAELQAY 802

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
              ++D     +  +       +  + P+  + D        + +           +   
Sbjct: 803 MQYRFDLAWCELMNYAHKKGIEVIGDIPMYVSDDSADAWSEPENFWLSDTGKAIEISGAP 862

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYY-ADSWSKNKGIRIDHIM 227
             +F     +      R  H   + Y++W      ++S    +R+DH +
Sbjct: 863 PDNFAPEGQVWGNPTFRWDHMKQNGYTWWMDRLRRAFSLYDRVRLDHFL 911


>gi|296422688|ref|XP_002840891.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295637117|emb|CAZ85082.1| unnamed protein product [Tuber melanosporum]
          Length = 680

 Score = 37.5 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 18/45 (40%), Gaps = 6/45 (13%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKN------FPFETLQSLNY 55
           R   +   + E+  DIICLQE   E+ N         E  +   Y
Sbjct: 348 RKKLIHDQLIESKADIICLQEVDMENFNEYFMPGLAREEYKGAFY 392


>gi|229917706|ref|YP_002886352.1| Endonuclease/exonuclease/phosphatase [Exiguobacterium sp. AT1b]
 gi|229469135|gb|ACQ70907.1| Endonuclease/exonuclease/phosphatase [Exiguobacterium sp. AT1b]
          Length = 263

 Score = 37.5 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 39/279 (13%), Positives = 77/279 (27%), Gaps = 42/279 (15%)

Query: 4   VTVATWNVNSIRARI--------HNLAAWIKENNPDIICLQET---K--------TEDKN 44
           + + T N +   A +          +   I     D I LQE    K          + N
Sbjct: 1   MNILTLNCH---AWLEDRQQEKIDAIVERIASEEYDFIALQEVNQHKEAPLIYGNIRENN 57

Query: 45  FPF---ETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI 101
           F     E L+ L+ H       ++ G  I  +   I   T     +    ++  +     
Sbjct: 58  FAHVLVERLKELDLHYHMTWDFAHYGYDIYEEGVAILSRTPFLSTESFFVSKTTDPDNYK 117

Query: 102 NTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161
           + + ++     +  G    +T Y   + W          +L+     +   D+ ++    
Sbjct: 118 SRKIVK----AVIEGPETPTTVYSCHLGWWHDEEEPVKHQLDELLRRVEHDDHALLLGDF 173

Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI 221
           +    I  E    + +E                             WD         K +
Sbjct: 174 NNDAFIRGEG-YDYLMENGLQDLFHLATEREGDATVQGKIAG----WD------ENKKSL 222

Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
           RID ++ +      +    +          SDH  V  +
Sbjct: 223 RIDLMLTNAPI--HVSRHAVVFDGENGPVVSDHAGVEAT 259


>gi|147779996|emb|CAN60067.1| hypothetical protein VITISV_012399 [Vitis vinifera]
          Length = 1707

 Score = 37.5 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 12/83 (14%), Positives = 29/83 (34%), Gaps = 7/83 (8%)

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
           E   + + L +  +        +    +++    +   +     R+D  ++  +      
Sbjct: 785 EELGAIRGLWSDPWCIGGDFQFNQGGPFTW----SGGLNNQAMTRLDRFLVLEDWEGHFK 840

Query: 238 SARIDTKPRGWTKPSDHTPVIVS 260
            A   T PR     SDH P+++ 
Sbjct: 841 GAAQCTLPR---PVSDHFPILLD 860


>gi|324325200|gb|ADY20460.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           thuringiensis serovar finitimus YBT-020]
          Length = 788

 Score = 37.5 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 21/44 (47%), Gaps = 3/44 (6%)

Query: 223 IDHIMLSPEATSL--LHSARIDTKPRGWT-KPSDHTPVIVSLDI 263
           +DHI+++        +    ++T       + SDH PV+  +D+
Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNTNIMKEHGRVSDHDPVLAQIDL 784


>gi|301052723|ref|YP_003790934.1| endonuclease/exonuclease/phosphatase [Bacillus anthracis CI]
 gi|300374892|gb|ADK03796.1| endonuclease/exonuclease/phosphatase [Bacillus cereus biovar
           anthracis str. CI]
          Length = 788

 Score = 37.5 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 21/44 (47%), Gaps = 3/44 (6%)

Query: 223 IDHIMLSPEATSL--LHSARIDTKPRGWT-KPSDHTPVIVSLDI 263
           +DHI+++        +    ++T       + SDH PV+  +D+
Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNTNIMKEHGRVSDHDPVLAQIDL 784


>gi|281338506|gb|EFB14090.1| hypothetical protein PANDA_006139 [Ailuropoda melanoleuca]
          Length = 126

 Score = 37.5 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 35/110 (31%), Gaps = 12/110 (10%)

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
                 E     + L  M  TD  R  H     ++F+      +SK      DHI+    
Sbjct: 14  KQKINKETMALDKTLDKMDLTDIFRTFHPKEAEHTFFSSAHGIFSKR-----DHILGHKS 68

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
             +      I          SDH    + L++   +K    + +  +K I
Sbjct: 69  GLNKYKKTEITPCI-----FSDHNA--MELEVNHKKKLGNTTNTWRLKNI 111


>gi|238063240|ref|ZP_04607949.1| endonuclease/exonuclease/phosphatase [Micromonospora sp. ATCC
           39149]
 gi|237885051|gb|EEP73879.1| endonuclease/exonuclease/phosphatase [Micromonospora sp. ATCC
           39149]
          Length = 331

 Score = 37.5 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 16/43 (37%), Gaps = 7/43 (16%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           IDH+++         S R           SDH  V+  L +P 
Sbjct: 295 IDHVLVDRRIAVRSVSVR-------GVPGSDHRAVLAELRLPA 330


>gi|228913758|ref|ZP_04077383.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|228845697|gb|EEM90723.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
          Length = 190

 Score = 37.5 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 21/44 (47%), Gaps = 3/44 (6%)

Query: 223 IDHIMLSPEATSL--LHSARIDTKPRGWT-KPSDHTPVIVSLDI 263
           +DHI+++        +    ++T       + SDH PV+  +D+
Sbjct: 143 LDHILVTNNIAPHTIVDPVHLNTNIMKEHGRVSDHDPVLAQIDL 186


>gi|228926225|ref|ZP_04089300.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|228833478|gb|EEM79040.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
          Length = 788

 Score = 37.5 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 21/44 (47%), Gaps = 3/44 (6%)

Query: 223 IDHIMLSPEATSL--LHSARIDTKPRGWT-KPSDHTPVIVSLDI 263
           +DHI+++        +    ++T       + SDH PV+  +D+
Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNTNIMKEHGRVSDHDPVLAQIDL 784


>gi|229084175|ref|ZP_04216463.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-44]
 gi|228699133|gb|EEL51830.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-44]
          Length = 190

 Score = 37.5 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 21/44 (47%), Gaps = 3/44 (6%)

Query: 223 IDHIMLSPEATSL--LHSARIDTKPRGWT-KPSDHTPVIVSLDI 263
           +DHI+++        +    ++T       + SDH PV+  +D+
Sbjct: 143 LDHILVTNNIAPHTIVDPVHLNTNIMKEHGRVSDHDPVLAQIDL 186


>gi|229090130|ref|ZP_04221380.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-42]
 gi|228693207|gb|EEL46918.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-42]
          Length = 788

 Score = 37.5 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 21/44 (47%), Gaps = 3/44 (6%)

Query: 223 IDHIMLSPEATSL--LHSARIDTKPRGWT-KPSDHTPVIVSLDI 263
           +DHI+++        +    ++T       + SDH PV+  +D+
Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNTNIMKEHGRVSDHDPVLAQIDL 784


>gi|170688095|ref|ZP_02879307.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
           str. A0465]
 gi|254682749|ref|ZP_05146610.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. CNEVA-9066]
 gi|170667990|gb|EDT18741.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
           str. A0465]
          Length = 788

 Score = 37.5 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 21/44 (47%), Gaps = 3/44 (6%)

Query: 223 IDHIMLSPEATSL--LHSARIDTKPRGWT-KPSDHTPVIVSLDI 263
           +DHI+++        +    ++T       + SDH PV+  +D+
Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNTNIMKEHGRVSDHDPVLAQIDL 784


>gi|196037227|ref|ZP_03104538.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus NVH0597-99]
 gi|196031469|gb|EDX70065.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           cereus NVH0597-99]
          Length = 788

 Score = 37.5 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 21/44 (47%), Gaps = 3/44 (6%)

Query: 223 IDHIMLSPEATSL--LHSARIDTKPRGWT-KPSDHTPVIVSLDI 263
           +DHI+++        +    ++T       + SDH PV+  +D+
Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNTNIMKEHGRVSDHDPVLAQIDL 784


>gi|167635355|ref|ZP_02393669.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
           str. A0442]
 gi|254740190|ref|ZP_05197882.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. Kruger B]
 gi|167529183|gb|EDR91936.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
           str. A0442]
          Length = 788

 Score = 37.5 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 21/44 (47%), Gaps = 3/44 (6%)

Query: 223 IDHIMLSPEATSL--LHSARIDTKPRGWT-KPSDHTPVIVSLDI 263
           +DHI+++        +    ++T       + SDH PV+  +D+
Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNTNIMKEHGRVSDHDPVLAQIDL 784


>gi|49479799|ref|YP_035327.1| endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar konkukian str. 97-27]
 gi|49331355|gb|AAT62001.1| endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar konkukian str. 97-27]
          Length = 788

 Score = 37.5 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 21/44 (47%), Gaps = 3/44 (6%)

Query: 223 IDHIMLSPEATSL--LHSARIDTKPRGWT-KPSDHTPVIVSLDI 263
           +DHI+++        +    ++T       + SDH PV+  +D+
Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNTNIMKEHGRVSDHDPVLAQIDL 784


>gi|30261191|ref|NP_843568.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. Ames]
 gi|47777892|ref|YP_017700.2| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. 'Ames Ancestor']
 gi|30254805|gb|AAP25054.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. Ames]
 gi|47551597|gb|AAT30175.2| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
           str. 'Ames Ancestor']
          Length = 583

 Score = 37.5 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 21/44 (47%), Gaps = 3/44 (6%)

Query: 223 IDHIMLSPEATSL--LHSARIDTKPRGWT-KPSDHTPVIVSLDI 263
           +DHI+++        +    ++T       + SDH PV+  +D+
Sbjct: 536 LDHILVTNNIAPHTIVDPVHLNTNIMKEHGRVSDHDPVLAQIDL 579


>gi|49184024|ref|YP_027276.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. Sterne]
 gi|65318458|ref|ZP_00391417.1| COG2374: Predicted extracellular nuclease [Bacillus anthracis str.
           A2012]
 gi|165871845|ref|ZP_02216488.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
           str. A0488]
 gi|167640270|ref|ZP_02398536.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
           str. A0193]
 gi|170707621|ref|ZP_02898073.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
           str. A0389]
 gi|177654201|ref|ZP_02936174.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
           str. A0174]
 gi|190566721|ref|ZP_03019638.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
           Tsiankovskii-I]
 gi|227816075|ref|YP_002816084.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
           str. CDC 684]
 gi|229604339|ref|YP_002865620.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. A0248]
 gi|254725540|ref|ZP_05187322.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. A1055]
 gi|254734166|ref|ZP_05191879.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. Western North America USA6153]
 gi|254753529|ref|ZP_05205565.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. Vollum]
 gi|254758627|ref|ZP_05210654.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. Australia 94]
 gi|49177951|gb|AAT53327.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
           str. Sterne]
 gi|164712422|gb|EDR17956.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
           str. A0488]
 gi|167511871|gb|EDR87251.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
           str. A0193]
 gi|170127396|gb|EDS96271.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
           str. A0389]
 gi|172080908|gb|EDT65988.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
           str. A0174]
 gi|190562273|gb|EDV16241.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
           Tsiankovskii-I]
 gi|227003436|gb|ACP13179.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. CDC 684]
 gi|229268747|gb|ACQ50384.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
           anthracis str. A0248]
          Length = 788

 Score = 37.5 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 21/44 (47%), Gaps = 3/44 (6%)

Query: 223 IDHIMLSPEATSL--LHSARIDTKPRGWT-KPSDHTPVIVSLDI 263
           +DHI+++        +    ++T       + SDH PV+  +D+
Sbjct: 741 LDHILVTNNIAPHTIVDPVHLNTNIMKEHGRVSDHDPVLAQIDL 784


>gi|322789041|gb|EFZ14499.1| hypothetical protein SINV_10499 [Solenopsis invicta]
          Length = 1157

 Score = 37.5 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 62/197 (31%), Gaps = 28/197 (14%)

Query: 96  EATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYN 155
                + + +      +   G    + +  D     ++      + L   + + + GD+N
Sbjct: 672 AIRCVLYSTSFCFVCAHFAAGQSQVNERNADYAEITRKITFPMGRTLNTHDYVFWCGDFN 731

Query: 156 IIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF-WDYYADS 214
              +        + + +    +      +  Q  G               ++ +D ++D 
Sbjct: 732 YRVEMDKDEMKELIKQNEFDQILQYDQLKVQQQQGNVFKNFQEGPITFAPTYKYDLFSDD 791

Query: 215 WSKNKGIRIDHIMLSPEATSLLHSAR------ID-----------TKPRGWTKPSDHTPV 257
           +  ++  R      +P  T  +   R      ID              R   K SDH PV
Sbjct: 792 YDTSEKCR------TPAWTDRILWKRRKQIPDIDSPTDWNPGKLVYYGRAELKQSDHRPV 845

Query: 258 IVSLDIP----EPRKKQ 270
           I ++DI     +P K++
Sbjct: 846 IATIDIDVHCVDPEKRE 862


>gi|225870288|ref|YP_002746235.1| endonuclease/exonuclease/phosphatase family surface anchored
           protein [Streptococcus equi subsp. equi 4047]
 gi|225699692|emb|CAW93409.1| endonuclease/exonuclease/phosphatase family surface anchored
           protein [Streptococcus equi subsp. equi 4047]
          Length = 926

 Score = 37.5 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 33/90 (36%), Gaps = 14/90 (15%)

Query: 192 TDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT-- 249
              + + H+    YS++ Y  ++ +      +D++++S           +          
Sbjct: 793 MANLVSRHELSDRYSYF-YRGNNQT------LDNMLVSRNLLGRYEFDMVHVNSPFMEAH 845

Query: 250 -KPSDHTPVIVSL----DIPEPRKKQQDST 274
            + SDH P+++ L    D P     Q   T
Sbjct: 846 GRASDHDPLLLQLSFGKDKPAAPSDQPKKT 875


>gi|313243086|emb|CBY39780.1| unnamed protein product [Oikopleura dioica]
          Length = 358

 Score = 37.5 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 23/61 (37%), Gaps = 26/61 (42%)

Query: 2   SVVTVATWNVNSI------R--------ARIHNLAAW----------IKENNPDIICLQE 37
           S   +++WN+  +      R        A    L  W          IKE + D++CLQE
Sbjct: 44  SKFRLSSWNI--LAQDYADRCSHLYGHLASKKQLLNWPVRWTKISDEIKELDSDVLCLQE 101

Query: 38  T 38
            
Sbjct: 102 V 102


>gi|225460610|ref|XP_002264296.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 1159

 Score = 37.5 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 14/118 (11%), Positives = 35/118 (29%), Gaps = 7/118 (5%)

Query: 143 ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH 202
             EE     G +         +N I    +      +  + ++   +     +R      
Sbjct: 80  FWEEMGTIRGLWQDPWCVGGDFNVIRLLGERNRISRLSAAMRRFSEVIDDLELRDFPLQG 139

Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
             +++        +     R+D  ++S +       A    +       SDH P+++ 
Sbjct: 140 GSFTW----RGGLNNQTQSRLDRFLVSEDWEGYFSGAI---QSLLPRIVSDHCPILLD 190


>gi|118086197|ref|XP_418838.2| PREDICTED: similar to KIAA1706 protein [Gallus gallus]
          Length = 558

 Score = 37.5 bits (85), Expect = 2.2,   Method: Composition-based stats.
 Identities = 38/287 (13%), Positives = 71/287 (24%), Gaps = 38/287 (13%)

Query: 3   VVTVATWNV--NSI-RARIHNLAAW----IKENNPDIICLQETKTEDKNFPFETLQSLNY 55
           V+ VATWN+   SI +A    +       + EN+  ++ +QE          E L+    
Sbjct: 252 VLRVATWNLQSCSIEKANNPGVREVICMTLLENSIKLLAVQEL------LDREALEKFCM 305

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY--- 112
            +      +              +     G              T     L+  +     
Sbjct: 306 ELNQPTLPNIRKWKGPRGCWKGVVSEKPSGQLPKGVEYCGFLWDTTAGIELKDASSQENV 365

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIW--- 169
             +GN   S  +     +           L L        +       H           
Sbjct: 366 QTNGNGRHSYPHPYIAHFKVGMNDLTLVNLHLALAPAAGDNAGKNHDSHKLATFAQTLQE 425

Query: 170 ----ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225
               E D     +  Q+     +              + ++         SK+    +D+
Sbjct: 426 TLKGEKDVIILGDFNQAPDSSDHDILRKEKFHHLVPSNTFTNISTKNPQGSKS----LDN 481

Query: 226 IMLSPEATSL-----------LHSARIDTKPRGWTKPSDHTPVIVSL 261
           + +S     +           L +  I          SDH PV+   
Sbjct: 482 MWISRSLKKVFTGHWAVVREGLTNPWIPDNWSWGGVASDHCPVLAEF 528


>gi|329890223|ref|ZP_08268566.1| endonuclease/Exonuclease/phosphatase family protein [Brevundimonas
           diminuta ATCC 11568]
 gi|328845524|gb|EGF95088.1| endonuclease/Exonuclease/phosphatase family protein [Brevundimonas
           diminuta ATCC 11568]
          Length = 315

 Score = 37.5 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 13/62 (20%)

Query: 206 SFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR-GWTKPSDHTPVIVSLDIP 264
           ++      +     GI IDH+  SP+            + R G    SDH PVIV L   
Sbjct: 266 TWPS----ALPPFLGITIDHVWRSPDLA--------LVERRLGQKTGSDHRPVIVRLSRA 313

Query: 265 EP 266
           EP
Sbjct: 314 EP 315


>gi|300113189|ref|YP_003759764.1| endonuclease/exonuclease/phosphatase [Nitrosococcus watsonii C-113]
 gi|299539126|gb|ADJ27443.1| Endonuclease/exonuclease/phosphatase [Nitrosococcus watsonii C-113]
          Length = 289

 Score = 37.5 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 10/94 (10%), Positives = 24/94 (25%), Gaps = 14/94 (14%)

Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227
                     ++       +                + ++  +            IDHI+
Sbjct: 179 HNHPYVVVMGDLNCQIHSPELRALLRKTGLKAPVTKIPTYPSWRPK-------RHIDHIL 231

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           +SP    ++    +          SDH P+   +
Sbjct: 232 VSPSL-EVIQVCALAHAV------SDHLPLATEI 258


>gi|289741011|gb|ADD19253.1| glucose-repressible alcohol dehydrogenase transcriptional effector
           CCR4 [Glossina morsitans morsitans]
          Length = 627

 Score = 37.5 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 37/294 (12%), Positives = 73/294 (24%), Gaps = 56/294 (19%)

Query: 17  RIHNLAAWIKENNPDIICLQE--TK---------TEDKN------FPFETLQSLN----Y 55
           R   +   I   N DIICLQE   K          ED           + +        Y
Sbjct: 331 RKQLIIKEILGYNADIICLQEVDVKFFNFDLQHILEDDQQAFKGLLAQKGICGEGVATFY 390

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI------- 108
           +++           I    + + I   L       +           T  L +       
Sbjct: 391 NVKRFDLLETRNFNIGENIRVLTIFRDLWQKIQTNEKLAERICDRSTTLQLTLLKMKECE 450

Query: 109 --------GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP 160
                      + P  + I   ++   + +I+   R   ++L L E    A  ++     
Sbjct: 451 HYLLVANTHLYFHPDADHIRLLQFGLSMLYIEDMYRKLIKQLNLNEENQLAVVFSGDFNS 510

Query: 161 HDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH-----HLYSFWDYYADSW 215
                      +     +        +      +++             Y+ + +   + 
Sbjct: 511 VPECGIFRLMTEGFVEDDFIDWRSNTEEALAGVSLKQPFRMQSACGTPQYTNFTHAFAA- 569

Query: 216 SKNKGIRIDHIML-SPEA-------TSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
                  +D+I   S             L   +          PSDH  ++  L
Sbjct: 570 ------CLDYIFYQSDRLDVEQVVPLPALEELKSHIAIPSVVFPSDHVALVADL 617


>gi|260589618|ref|ZP_05855531.1| putative cell wall binding repeat-containing domain protein [Blautia
            hansenii DSM 20583]
 gi|260539858|gb|EEX20427.1| putative cell wall binding repeat-containing domain protein [Blautia
            hansenii DSM 20583]
          Length = 2146

 Score = 37.5 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 13/174 (7%), Positives = 39/174 (22%), Gaps = 13/174 (7%)

Query: 48   ETLQSLNYHIETC--GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT 105
            + +    Y+ E+       +  V     Y             +D    +++    + T  
Sbjct: 1953 KEISKHWYYFESNGIMTTGWTEVGEHWYYMDQWGAMMTGWVSVDGHWYYMDQWGAMTTGW 2012

Query: 106  LRIGNLYLPHGNP----ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161
            + +   Y                D    ++      A+  + +     +   +  +    
Sbjct: 2013 VYVNGHYYYMDRWGAMQTGWVSVDGHWYYLNADGAMATGWVYVNGHYYYMDQWGAMQTGW 2072

Query: 162  DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW 215
                   +  +A   +     +              T       + W    + W
Sbjct: 2073 VSVGGHWYYLNADGAMATGWVYVGGYWYYLDQWGAMT-------TGWVQVGNDW 2119


>gi|147801777|emb|CAN61342.1| hypothetical protein VITISV_022199 [Vitis vinifera]
          Length = 784

 Score = 37.5 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 12/112 (10%), Positives = 37/112 (33%), Gaps = 10/112 (8%)

Query: 151 AGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHD---THHLYSF 207
            G+++I  +  +  + ++W     +    R+  + +                    + ++
Sbjct: 3   VGNFSISCRLRNVEDXLVWMFTGVYEPFSREDRECMWEEIGAIRGIWDDPWCLGGGVLTW 62

Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
               +   +     R+D  +++       +       PR     SDH P+++
Sbjct: 63  ----SGGRNNQAWARLDRFLVTQNWLDHFNGVVQSRLPRTT---SDHFPILL 107


>gi|83593698|ref|YP_427450.1| endonuclease/exonuclease/phosphatase [Rhodospirillum rubrum ATCC
          11170]
 gi|83576612|gb|ABC23163.1| Endonuclease/exonuclease/phosphatase [Rhodospirillum rubrum ATCC
          11170]
          Length = 255

 Score = 37.5 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 5/38 (13%)

Query: 6  VATWNVNSI-----RARIHNLAAWIKENNPDIICLQET 38
          +AT+N++S        R   +A  I+  + D+I LQE 
Sbjct: 19 IATYNIHSCLGTDGAFRPDRVAQAIRALDADVIGLQEV 56


>gi|228924088|ref|ZP_04087364.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|228835578|gb|EEM80943.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
          Length = 334

 Score = 37.5 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 24/63 (38%), Gaps = 16/63 (25%)

Query: 216 SKNKGIRIDHIMLSPEA-----TSLLHSAR-IDTKPRGW----------TKPSDHTPVIV 259
             N  + +DHI+LSP          + ++  I                  +PSDH PV +
Sbjct: 271 EANSHLLLDHILLSPGLSTNSGLRRVQNSGKIHHAEYNNHTVNNGNFRENRPSDHRPVSI 330

Query: 260 SLD 262
            L+
Sbjct: 331 LLE 333


>gi|303312829|ref|XP_003066426.1| glucose-repressible alcohol dehydrogenase, putative [Coccidioides
           posadasii C735 delta SOWgp]
 gi|240106088|gb|EER24281.1| glucose-repressible alcohol dehydrogenase, putative [Coccidioides
           posadasii C735 delta SOWgp]
 gi|320036731|gb|EFW18669.1| glucose-repressible alcohol dehydrogenase transcriptional effector
           [Coccidioides posadasii str. Silveira]
          Length = 758

 Score = 37.5 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 17  RIHNLAAWIKENNPDIICLQET 38
           R   L   I+ ++ DI+CLQE 
Sbjct: 414 RRDLLLNEIRGHDADIVCLQEI 435


>gi|119192450|ref|XP_001246831.1| hypothetical protein CIMG_00602 [Coccidioides immitis RS]
 gi|121932279|sp|Q1EA11|CCR4_COCIM RecName: Full=Glucose-repressible alcohol dehydrogenase
           transcriptional effector; AltName: Full=Carbon
           catabolite repressor protein 4; AltName:
           Full=Cytoplasmic deadenylase
          Length = 687

 Score = 37.5 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 17  RIHNLAAWIKENNPDIICLQET 38
           R   L   I+ ++ DI+CLQE 
Sbjct: 343 RRDLLLNEIRGHDADIVCLQEI 364


>gi|314950241|ref|ZP_07853524.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecium TX0082]
 gi|313643380|gb|EFS07960.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecium TX0082]
          Length = 284

 Score = 37.5 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 33/285 (11%), Positives = 67/285 (23%), Gaps = 31/285 (10%)

Query: 4   VTVATWNVNSIRARI-----HNLAAWIKE---NNPDIICLQETKTEDKNFPFETLQSLN- 54
           +   T N +S    +       L     +    + ++I LQE    ++    E ++    
Sbjct: 8   MKFMTLNTHS---WLEPEPEKKLQELADKILLEDYEVIALQEI---NQLLESEEVEPAKL 61

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL----RIGN 110
                   +        +      +  H        +   I          L     + +
Sbjct: 62  MKFCPVKNQVPIRKDNFAYRLVQLLKEHGKEYFWSWEMSHIGYDKYEEGNALLTKKTLES 121

Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170
             L          Y  +   I +                +  D               + 
Sbjct: 122 QVLTVSQFQKKEDYQTRKILIGKTKIDDQDIFVSSCHFSWWTDKKSGFYFEWKNLENYFL 181

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADS---------WSKN-KG 220
                   +      + + G+     +       Y   +    +         W +N + 
Sbjct: 182 ETRVPLFFLGDFNNPVDSQGYYTVRESCLLLQDSYVVANEKGKAATVEKKIDGWEQNTEK 241

Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           +RID I +           RI          SDH  V + LD+ E
Sbjct: 242 LRIDFIFVPEGMQVK-KYQRIFDGI-DSPIISDHYGVEIELDVNE 284


>gi|307200674|gb|EFN80777.1| Protein angel-like protein 2 [Harpegnathos saltator]
          Length = 475

 Score = 37.5 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 25/78 (32%), Gaps = 22/78 (28%)

Query: 3   VVTVATWNV---N-----------------SIRARIHNLAAWIKENNPDIICLQETKTED 42
            + + ++N+   N                 S + R   +   I E   +IICLQE   +D
Sbjct: 87  TLRLFSFNILAQNLLDTHSYLYQEHDPAALSWKNRKPLVLQEILEAEANIICLQEV-LKD 145

Query: 43  KNFPF-ETLQSLNYHIET 59
               F      L Y    
Sbjct: 146 HLLDFVAPFLELGYEYLY 163


>gi|182439171|ref|YP_001826890.1| hypothetical protein SGR_5378 [Streptomyces griseus subsp.
          griseus NBRC 13350]
 gi|178467687|dbj|BAG22207.1| conserved hypothetical protein [Streptomyces griseus subsp.
          griseus NBRC 13350]
          Length = 263

 Score = 37.5 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 13/36 (36%), Positives = 21/36 (58%)

Query: 2  SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQE 37
          +V+ V ++NV S+R     LA  I    PD++ +QE
Sbjct: 20 AVIRVLSYNVRSLRDDTAALARVIHACAPDLVLVQE 55


>gi|69244470|ref|ZP_00602886.1| Endonuclease/exonuclease/phosphatase [Enterococcus faecium DO]
 gi|257881648|ref|ZP_05661301.1| endonuclease/exonuclease/phosphatase [Enterococcus faecium
           1,231,502]
 gi|258615343|ref|ZP_05713113.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecium DO]
 gi|293562857|ref|ZP_06677329.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecium E1162]
 gi|294623334|ref|ZP_06702194.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecium U0317]
 gi|68196411|gb|EAN10839.1| Endonuclease/exonuclease/phosphatase [Enterococcus faecium DO]
 gi|257817306|gb|EEV44634.1| endonuclease/exonuclease/phosphatase [Enterococcus faecium
           1,231,502]
 gi|291597228|gb|EFF28419.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecium U0317]
 gi|291605181|gb|EFF34643.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecium E1162]
          Length = 277

 Score = 37.5 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 33/285 (11%), Positives = 67/285 (23%), Gaps = 31/285 (10%)

Query: 4   VTVATWNVNSIRARI-----HNLAAWIKE---NNPDIICLQETKTEDKNFPFETLQSLN- 54
           +   T N +S    +       L     +    + ++I LQE    ++    E ++    
Sbjct: 1   MKFMTLNTHS---WLEPEPEKKLQELADKILLEDYEVIALQEI---NQLLESEEVEPAKL 54

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL----RIGN 110
                   +        +      +  H        +   I          L     + +
Sbjct: 55  MKFCPVKNQVPIRKDNFAYRLVQLLKEHGKEYFWSWEMSHIGYDKYEEGNALLTKKTLES 114

Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170
             L          Y  +   I +                +  D               + 
Sbjct: 115 QVLTVSQFQKKEDYQTRKILIGKTKIDDQDIFVSSCHFSWWTDKKSGFYFEWKNLENYFL 174

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADS---------WSKN-KG 220
                   +      + + G+     +       Y   +    +         W +N + 
Sbjct: 175 ETRVPLFFLGDFNNPVDSQGYYTVRESCLLLQDSYVVANEKGKAATVEKKIDGWEQNTEK 234

Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           +RID I +           RI          SDH  V + LD+ E
Sbjct: 235 LRIDFIFVPEGMQVK-KYQRIFDGI-DSPIISDHYGVEIELDVNE 277


>gi|253571723|ref|ZP_04849129.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|251838931|gb|EES67016.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
          Length = 314

 Score = 37.5 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 17/193 (8%), Positives = 51/193 (26%), Gaps = 7/193 (3%)

Query: 20  NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEI 79
            +   + + + D++ L E + + K F    ++ L    +    ++++    +      + 
Sbjct: 46  GIIDVLDQMDADVVFLCEIR-DGKQFIPHVIEELEKRGKHYYGETFDLAIGVLSKFKPDS 104

Query: 80  VTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFAS 139
            T       D     ++   TI  Q +   + +L + +           +  K+  +  +
Sbjct: 105 WTKCCIVPGDEGRAMVKMVATIEGQPVSFYSCHLDYRHYQCYMPRGYNGTTWKKMDKPIT 164

Query: 140 QR------LELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTD 193
                               +    Q        I                  +++   +
Sbjct: 165 DEEEVLKANRQSFRDETIRAFIQEVQSDIQQGRPIIMGGDFNEPSHLDWQADTKDLWDHN 224

Query: 194 AIRATHDTHHLYS 206
                 D   + S
Sbjct: 225 GAIIHWDCSMMLS 237


>gi|256396175|ref|YP_003117739.1| endonuclease/exonuclease/phosphatase [Catenulispora acidiphila DSM
           44928]
 gi|256362401|gb|ACU75898.1| Endonuclease/exonuclease/phosphatase [Catenulispora acidiphila DSM
           44928]
          Length = 1007

 Score = 37.5 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 9/43 (20%)

Query: 4   VTVATWNV-------NSIRARIHN--LAAWIKENNPDIICLQE 37
           + + TWN        + IR       L A ++  + D+I LQE
Sbjct: 122 LRILTWNTLWDRYDKDLIRTAERRPMLLAALRAADVDVIALQE 164


>gi|189194932|ref|XP_001933804.1| conserved hypothetical protein [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187979683|gb|EDU46309.1| conserved hypothetical protein [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 410

 Score = 37.5 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 31/226 (13%), Positives = 60/226 (26%), Gaps = 20/226 (8%)

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
             +  N  A          +T L         +F  A  +     ++      P      
Sbjct: 190 WLQEMNDEAEWRPIGLRLHLTLLRLTRSREHYKFDFAVLSQIRTHIKSWWQQTPLPTTTA 249

Query: 121 STKYDDKISWIKRFLRFASQRLEL--EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
           S  +    ++ +                   +AG + IIP         I   D      
Sbjct: 250 SPTFQKWHNFDQEQWMPFVSHKFPRPGIRHQWAGSFRIIPGYSKIAGRGIIAGDFNPVPP 309

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNK------------GIRIDHI 226
                 +  ++   DA    H     +++  Y   S+  N+            G+ I   
Sbjct: 310 EDDDLVRANDLT--DAWTQLHPNSPGHTWGVYGEQSFPSNRFDKVALFNLSPSGMGI--- 364

Query: 227 MLSPEATSLLHSARID-TKPRGWTKPSDHTPVIVSLDIPEPRKKQQ 271
           + + E         +D T+       SDH  +   +   E R + +
Sbjct: 365 LQTSELRFCSEKTSVDATESIPKAHFSDHLGLWCDVGWEEDRPRPE 410


>gi|147864195|emb|CAN83027.1| hypothetical protein VITISV_012956 [Vitis vinifera]
          Length = 874

 Score = 37.5 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 22/61 (36%), Gaps = 9/61 (14%)

Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP-SDHTPVIV 259
               +++    +   +     R+D  +++P               R   +P SDH PV++
Sbjct: 390 QGGSFTW----SGGLNNQSRARLDRFLVTPCWLDQFSRVV----QRRLPRPTSDHFPVLL 441

Query: 260 S 260
            
Sbjct: 442 E 442


>gi|125579657|gb|EAZ20803.1| hypothetical protein OsJ_36426 [Oryza sativa Japonica Group]
          Length = 787

 Score = 37.5 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 25/58 (43%), Gaps = 9/58 (15%)

Query: 204 LYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI--DTKPRGWTKPSDHTPVIV 259
            Y++ D   +    N  +R+D  +   +   +  +AR+   T  R     SDH P+ V
Sbjct: 63  PYTY-DNRREGR-NNIRVRLDRALADNDWREMFGNARVSHLTSTR-----SDHCPISV 113


>gi|29345579|ref|NP_809082.1| hypothetical protein BT_0169 [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|29337471|gb|AAO75276.1| putative endonuclease/exonuclease/phosphatase [Bacteroides
           thetaiotaomicron VPI-5482]
          Length = 351

 Score = 37.5 bits (85), Expect = 2.3,   Method: Composition-based stats.
 Identities = 17/193 (8%), Positives = 51/193 (26%), Gaps = 7/193 (3%)

Query: 20  NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEI 79
            +   + + + D++ L E + + K F    ++ L    +    ++++    +      + 
Sbjct: 46  GIIDVLDQMDADVVFLCEIR-DGKQFIPHVIEELEKRGKHYYGETFDLAIGVLSKFKPDS 104

Query: 80  VTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFAS 139
            T       D     ++   TI  Q +   + +L + +           +  K+  +  +
Sbjct: 105 WTKCCIVPGDEGRAMVKMVATIEGQPVSFYSCHLDYRHYQCYMPRGYNGTTWKKMDKPIT 164

Query: 140 QR------LELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTD 193
                               +    Q        I                  +++   +
Sbjct: 165 DEEEVLKANRQSFRDETIRAFIQEVQSDIQQGRPIIMGGDFNEPSHLDWQADTKDLWDHN 224

Query: 194 AIRATHDTHHLYS 206
                 D   + S
Sbjct: 225 GAIIHWDCSMMLS 237


>gi|307103438|gb|EFN51698.1| hypothetical protein CHLNCDRAFT_54968 [Chlorella variabilis]
          Length = 500

 Score = 37.5 bits (85), Expect = 2.4,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 3/54 (5%)

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQN 277
           D+ + S      L +  +D+      + SDH  ++  L++  P   Q+DST+Q 
Sbjct: 206 DYWLASASLLPRLPTMAVDSWGLAA-QHSDHATLL--LELAAPPAVQRDSTAQQ 256


>gi|298384499|ref|ZP_06994059.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. 1_1_14]
 gi|298262778|gb|EFI05642.1| endonuclease/exonuclease/phosphatase [Bacteroides sp. 1_1_14]
          Length = 351

 Score = 37.5 bits (85), Expect = 2.4,   Method: Composition-based stats.
 Identities = 17/193 (8%), Positives = 51/193 (26%), Gaps = 7/193 (3%)

Query: 20  NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEI 79
            +   + + + D++ L E + + K F    ++ L    +    ++++    +      + 
Sbjct: 46  GIIDVLDQMDADVVFLCEIR-DGKQFIPHVIEELEKRGKHYYGETFDLAIGVLSKFKPDS 104

Query: 80  VTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFAS 139
            T       D     ++   TI  Q +   + +L + +           +  K+  +  +
Sbjct: 105 WTKCCIVPGDEGRAMVKMVATIEGQPVSFYSCHLDYRHYQCYMPRGYNGTTWKKMDKPIT 164

Query: 140 QR------LELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTD 193
                               +    Q        I                  +++   +
Sbjct: 165 DEEEVLKANRQSFRDETIRAFIQEVQSDIQQGRPIIMGGDFNEPSHLDWQADTKDLWDHN 224

Query: 194 AIRATHDTHHLYS 206
                 D   + S
Sbjct: 225 GAVIHWDCSMMLS 237


>gi|294674281|ref|YP_003574897.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           ruminicola 23]
 gi|294473158|gb|ADE82547.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           ruminicola 23]
          Length = 293

 Score = 37.5 bits (85), Expect = 2.4,   Method: Composition-based stats.
 Identities = 37/258 (14%), Positives = 61/258 (23%), Gaps = 37/258 (14%)

Query: 28  NNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDD 87
            +PDI   QE    +        Q  +Y     G+         S          L    
Sbjct: 47  EHPDIFGAQEV--LESQRQDLLKQLTDYDCIGLGRDDGKHAGEHSNIFYDRNKIKLLDHG 104

Query: 88  LDVQARFIEATFTINTQ-TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEE 146
               +   E          +RI +         +   Y   +      +         E 
Sbjct: 105 DFWLSETPEKPGLGWDAACVRICSWGYFKLKGTSLKFYYFNL-----HMDHVGTVARREG 159

Query: 147 PLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYS 206
             +       I +         +  D    +    +   + +  F  A     +     S
Sbjct: 160 AKLVVQRIKEIAKGKPVVLTGDFNVDQTNEIYGIFTQSGVLDDSFEKAQFRFAENGTFNS 219

Query: 207 FWDYYADSWSKNKGIRIDHIMLSPEAT-------------------SLLHSA----RIDT 243
           +              RIDH+ +SP  T                     +  A     I+ 
Sbjct: 220 W------DPELKTASRIDHVFVSPAFTVQRYGVLTNTYWSEAPQQTDTVKGADAPQEINF 273

Query: 244 KPRGWTKPSDHTPVIVSL 261
           +      PSDH PV V L
Sbjct: 274 QKHQKRLPSDHYPVFVRL 291


>gi|282891647|ref|ZP_06300134.1| hypothetical protein pah_c188o013 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281498437|gb|EFB40769.1| hypothetical protein pah_c188o013 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 192

 Score = 37.5 bits (85), Expect = 2.4,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 17/52 (32%), Gaps = 13/52 (25%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRG-------------WTKPSDHTPVIVSL 261
           +D++++S      +H    D +                    SDH P+   +
Sbjct: 131 LDYVLVSKSLKDRVHMFEPDDQELSLANLAEDTVHFDPMLLFSDHRPLWTKI 182


>gi|147798313|emb|CAN65634.1| hypothetical protein VITISV_007119 [Vitis vinifera]
          Length = 1703

 Score = 37.5 bits (85), Expect = 2.4,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 23/60 (38%), Gaps = 9/60 (15%)

Query: 201 THHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
              ++S+ +        N+   R+D  +++     L        + R     SDH P+++
Sbjct: 369 QGGVFSWSEGR-----NNQSWARLDRFLVTQSWLDLFRGVV---QSRLSRPTSDHFPILL 420


>gi|115751701|ref|XP_795384.2| PREDICTED: similar to bucentaur [Strongylocentrotus purpuratus]
 gi|115934873|ref|XP_001188264.1| PREDICTED: similar to bucentaur [Strongylocentrotus purpuratus]
          Length = 426

 Score = 37.5 bits (85), Expect = 2.4,   Method: Composition-based stats.
 Identities = 10/59 (16%), Positives = 21/59 (35%), Gaps = 5/59 (8%)

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR 240
           +     N          H   +LY++         +N+   ID+I++     S +  A+
Sbjct: 225 AEFCHVNNLILTNTTFDHHKRNLYTWKS--PGDRYRNQ---IDYILIRRRWKSSIKDAK 278


>gi|328859868|gb|EGG08976.1| hypothetical protein MELLADRAFT_61521 [Melampsora larici-populina
           98AG31]
          Length = 152

 Score = 37.5 bits (85), Expect = 2.4,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 18/44 (40%), Gaps = 1/44 (2%)

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPR 267
           D    SPE      +   DT+    +  SDH  ++  LD+P   
Sbjct: 77  DLQWTSPECYDWATTCVTDTQF-KHSHFSDHMAILTELDLPANP 119


>gi|221640330|ref|YP_002526592.1| hypothetical protein RSKD131_2231 [Rhodobacter sphaeroides KD131]
 gi|221161111|gb|ACM02091.1| Hypothetical Protein RSKD131_2231 [Rhodobacter sphaeroides KD131]
          Length = 309

 Score = 37.5 bits (85), Expect = 2.4,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 23/50 (46%), Gaps = 8/50 (16%)

Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWT------KPSDHTPVIVSLDIP 264
           +R D+I+ +      + ++ +   P G        + S H PV V LD+P
Sbjct: 262 LRTDYILPARGL--HVTASGVLWPPPGDPLADVAAQASRHRPVWVELDLP 309


>gi|169787480|gb|ACA80179.1| putative DNA lyase [Colletotrichum cereale]
          Length = 233

 Score = 37.5 bits (85), Expect = 2.4,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 22/57 (38%)

Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81
           +    DI+ +QETK + K+   + +    + +     K   G + ++ Y       
Sbjct: 2  FEILEADIVIMQETKIQRKDLGDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATCC 58


>gi|169787476|gb|ACA80177.1| putative DNA lyase [Colletotrichum cereale]
          Length = 233

 Score = 37.5 bits (85), Expect = 2.4,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 22/57 (38%)

Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81
           +    DI+ +QETK + K+   + +    + +     K   G + ++ Y       
Sbjct: 2  FEILEADIVIMQETKIQRKDLGDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATCC 58


>gi|169787414|gb|ACA80146.1| putative DNA lyase [Colletotrichum cereale]
          Length = 233

 Score = 37.5 bits (85), Expect = 2.4,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 22/57 (38%)

Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81
           +    DI+ +QETK + K+   + +    + +     K   G + ++ Y       
Sbjct: 2  FEILEADIVIMQETKIQRKDLGDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATCC 58


>gi|169787330|gb|ACA80104.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787412|gb|ACA80145.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787430|gb|ACA80154.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787458|gb|ACA80168.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787470|gb|ACA80174.1| putative DNA lyase [Colletotrichum cereale]
          Length = 233

 Score = 37.5 bits (85), Expect = 2.4,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 22/57 (38%)

Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81
           +    DI+ +QETK + K+   + +    + +     K   G + ++ Y       
Sbjct: 2  FEILEADIVIMQETKIQRKDLGDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATCC 58


>gi|169787232|gb|ACA80055.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787440|gb|ACA80159.1| putative DNA lyase [Colletotrichum cereale]
 gi|169787442|gb|ACA80160.1| putative DNA lyase [Colletotrichum cereale]
          Length = 233

 Score = 37.5 bits (85), Expect = 2.4,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 22/57 (38%)

Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81
           +    DI+ +QETK + K+   + +    + +     K   G + ++ Y       
Sbjct: 2  FEILEADIVIMQETKIQRKDLGDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNATCC 58


>gi|313224249|emb|CBY20038.1| unnamed protein product [Oikopleura dioica]
 gi|313245969|emb|CBY34943.1| unnamed protein product [Oikopleura dioica]
          Length = 602

 Score = 37.5 bits (85), Expect = 2.4,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 18/50 (36%), Gaps = 12/50 (24%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55
             +WN      R H L   I   N DI+CLQE          +  +   Y
Sbjct: 296 FVSWN-----HRSHLLLDEIIGYNADIVCLQE-------LDSKMFRGEFY 333


>gi|218128486|ref|ZP_03457290.1| hypothetical protein BACEGG_00056 [Bacteroides eggerthii DSM 20697]
 gi|217989377|gb|EEC55690.1| hypothetical protein BACEGG_00056 [Bacteroides eggerthii DSM 20697]
          Length = 511

 Score = 37.5 bits (85), Expect = 2.4,   Method: Composition-based stats.
 Identities = 18/138 (13%), Positives = 40/138 (28%), Gaps = 9/138 (6%)

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYN-IIPQPHDCYNPIIWENDACFT 176
            I +         +       +  +E+   +     ++ I        + +I EN     
Sbjct: 140 YIATDWLHHFPVAMCAMENGKNVAIEVPSAMNLKECWDLINMSEKTRKHCMILENCCYDW 199

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWD-YYADSWSKNKGIRIDH-------IML 228
            E+         +            H+L  FW+ Y+ +  S   G R+D+       +  
Sbjct: 200 FEMNTLNMAQHGVFGEVIRAQGAYIHNLSPFWNHYWKNGESDKLGWRLDYNMRHRGDVYA 259

Query: 229 SPEATSLLHSARIDTKPR 246
           +     +  +  I    R
Sbjct: 260 THGLGPVAQALDIHRGDR 277


>gi|241762981|ref|ZP_04761043.1| Endonuclease/exonuclease/phosphatase [Acidovorax delafieldii 2AN]
 gi|241367933|gb|EER62152.1| Endonuclease/exonuclease/phosphatase [Acidovorax delafieldii 2AN]
          Length = 431

 Score = 37.5 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 22/51 (43%), Gaps = 13/51 (25%)

Query: 223 IDHIMLSPEATSLLHS-ARIDTKPRGW------TKP------SDHTPVIVS 260
           +DHI++S    + + +  ++   P G        +P      SDH P++  
Sbjct: 378 LDHILVSQSLAAAVSNTIKVSIGPFGGSLLPSVNRPDPLLAVSDHCPLVAD 428


>gi|169787284|gb|ACA80081.1| putative DNA lyase [Glomerella graminicola]
          Length = 233

 Score = 37.5 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 22/57 (38%)

Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVT 81
           +    DI+ +QETK + K+   + +    + +     K   G + ++ Y       
Sbjct: 2  FEILEADIVIMQETKIQRKDLRDDMVLVPGWDVVFSLPKHKKGYSGVAIYTRNAKCC 58


>gi|21686921|gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1833

 Score = 37.5 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 22/215 (10%), Positives = 60/215 (27%), Gaps = 12/215 (5%)

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           +  + +    +        ++     +   +            +           +  + 
Sbjct: 1   MGKNTQFWIHRPKIVFLAETRQDQYMVQNRIGLRRCFTVNGVGKGGGLALFWDESMNVVL 60

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEND 172
             + +        +      R      +    +  L+++    I     D +  I   N+
Sbjct: 61  KSYNSRHIDVLITELDCCTWRATFVYGEPRAQDRHLMWSLLRRIRSNSGDPWLMIGDFNE 120

Query: 173 ACFTLEVRQS-------FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDH 225
           A +  E +          +  + +     +         ++F +   +    N  +R+D 
Sbjct: 121 AMWQTEHKSHRKRSESQMRDFREVLSECDLHDIGFQGAPWTFCNMQREGR--NVKVRLDR 178

Query: 226 IMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
            + SP  +S    A I       T  SDH P+++ 
Sbjct: 179 GVASPAWSSRFPQAVI---THLTTPSSDHAPLLLE 210


>gi|282877586|ref|ZP_06286401.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           buccalis ATCC 35310]
 gi|281300158|gb|EFA92512.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           buccalis ATCC 35310]
          Length = 316

 Score = 37.5 bits (85), Expect = 2.5,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 18/64 (28%), Gaps = 21/64 (32%)

Query: 223 IDHIMLSPEATSLLHSARIDTKP---------------------RGWTKPSDHTPVIVSL 261
           +DHIM+       L    +   P                     R     SDH P++  L
Sbjct: 253 LDHIMVDEHTAQRLVECHVHDAPFLLKEDEKYGGVQPRRNYLGPRYQNGFSDHLPLVARL 312

Query: 262 DIPE 265
              +
Sbjct: 313 RWDD 316


>gi|307111955|gb|EFN60189.1| hypothetical protein CHLNCDRAFT_56640 [Chlorella variabilis]
          Length = 581

 Score = 37.1 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 3/54 (5%)

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQN 277
           D+ + S      L +  +D+      + SDH  ++  L++  P   Q+DST+Q 
Sbjct: 231 DYWLASASLLPRLPTMAVDSWGLAA-QHSDHATLL--LELAAPPAVQRDSTAQQ 281


>gi|126282271|ref|XP_001367467.1| PREDICTED: similar to KIAA0759 protein [Monodelphis domestica]
          Length = 671

 Score = 37.1 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 28/75 (37%), Gaps = 10/75 (13%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQ 62
           +  WN      R  NL    +  +PDI+CLQE   ++ ++  +    L+ + +      +
Sbjct: 273 ILNWN-----YRFSNLVQEFQHWDPDILCLQEV--QEDHYWEQLEPTLRMMGFTCFYKRR 325

Query: 63  KSYNGVAILSKYQPI 77
                      Y+  
Sbjct: 326 TGCKTDGCAVCYKHT 340


>gi|71274786|ref|ZP_00651074.1| Endonuclease/exonuclease/phosphatase [Xylella fastidiosa Dixon]
 gi|71901074|ref|ZP_00683183.1| Endonuclease/exonuclease/phosphatase [Xylella fastidiosa Ann-1]
 gi|170729968|ref|YP_001775401.1| hypothetical protein Xfasm12_0781 [Xylella fastidiosa M12]
 gi|71164518|gb|EAO14232.1| Endonuclease/exonuclease/phosphatase [Xylella fastidiosa Dixon]
 gi|71729156|gb|EAO31278.1| Endonuclease/exonuclease/phosphatase [Xylella fastidiosa Ann-1]
 gi|167964761|gb|ACA11771.1| conserved hypothetical protein [Xylella fastidiosa M12]
          Length = 256

 Score = 37.1 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 17/43 (39%), Gaps = 7/43 (16%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           IDHI++S           I          SDH  V + L IP+
Sbjct: 217 IDHILVSEGF-------YICKTEAVPAAFSDHLAVSMDLVIPQ 252


>gi|119961986|ref|YP_946639.1| 5'-nucleotidase family protein [Arthrobacter aurescens TC1]
 gi|119948845|gb|ABM07756.1| putative 5'-nucleotidase family protein [Arthrobacter aurescens
           TC1]
          Length = 1509

 Score = 37.1 bits (84), Expect = 2.5,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 26/71 (36%), Gaps = 21/71 (29%)

Query: 223 IDHIMLSPEATSLLHSARI---------------------DTKPRGWTKPSDHTPVIVSL 261
           +DHI+ SP A  ++    I                     +   +   + SDH PV+V L
Sbjct: 774 LDHILASPAAHKVVTGTDIWNINSVESVALEYSRYNNNVTNYYAQDEFRASDHDPVVVGL 833

Query: 262 DIPEPRKKQQD 272
           ++   +    D
Sbjct: 834 NLTADQPATVD 844


>gi|327474509|gb|EGF19914.1| RgfB protein [Streptococcus sanguinis SK408]
 gi|327490066|gb|EGF21854.1| RgfB protein [Streptococcus sanguinis SK1058]
          Length = 271

 Score = 37.1 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 28/250 (11%), Positives = 68/250 (27%), Gaps = 21/250 (8%)

Query: 18  IHNLAAWIKENNPDIICLQETK--TEDKNFPFETLQSLNYHIETCGQKSYNGVAILS--- 72
           ++ LA  I +   D+ICLQE    TE +           Y       + +     L    
Sbjct: 21  LNELAERILQEKYDVICLQEVNQLTESEQVVQAPF----YQAVEGAIEIHQDHFALCLVE 76

Query: 73  ------KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDD 126
                          +  G D+  +   I +   +  + + +     P           +
Sbjct: 77  KLAEAGLDYHWSWAYNHIGFDIYNEGVAILSRNPMAPREVLVSEANDPRDYHTRKVLLAE 136

Query: 127 KISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL 186
                +     +      ++     G++  + +        +           +Q +Q +
Sbjct: 137 TEVDGQLLTIASCHLSWWDKGFQ--GEWAKLEEELLKAESSLVLMGDFNNPVGQQGYQTI 194

Query: 187 QN--MGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK 244
               +   D+     +     +     A        ++ID++  S      +  + +   
Sbjct: 195 LASPLKLQDSHTVAKEAIGEATVEGTIAGWDDNKHALKIDYVFTSQGMD--VERSAVVFD 252

Query: 245 PRGWTKPSDH 254
            +     SDH
Sbjct: 253 GKETPVVSDH 262


>gi|317495662|ref|ZP_07954028.1| 4-alpha-glucanotransferase [Gemella moribillum M424]
 gi|316914217|gb|EFV35697.1| 4-alpha-glucanotransferase [Gemella moribillum M424]
          Length = 501

 Score = 37.1 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 17/163 (10%), Positives = 39/163 (23%), Gaps = 4/163 (2%)

Query: 67  GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDD 126
             + L  Y     +    G    +          I+ +      L         +  +  
Sbjct: 141 NASWLVDYAEYMAIKENFGYQSFIHWDEDIKRAEISAREKYCIELQDSIRYYTITQYFFF 200

Query: 127 KISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL 186
           K     +    +     + +  I+    ++           + E++    +    +    
Sbjct: 201 KQWLALKNYANSKGIKIIGDMPIYVSADSVEMWTMPE-LFKVNEDNEPLYVAGCPADDFS 259

Query: 187 QNMGFTDA--IRATHDTHHLYSFWDYYAD-SWSKNKGIRIDHI 226
                               YS+W Y    S+     +RIDH 
Sbjct: 260 PTGQLWGNPIYNWEKHREQNYSWWVYRVQESFKIYDVLRIDHF 302


>gi|254491940|ref|ZP_05105119.1| endonuclease/exonuclease/phosphatase family [Methylophaga
           thiooxidans DMS010]
 gi|224463418|gb|EEF79688.1| endonuclease/exonuclease/phosphatase family [Methylophaga
           thiooxydans DMS010]
          Length = 250

 Score = 37.1 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 24/266 (9%), Positives = 66/266 (24%), Gaps = 27/266 (10%)

Query: 4   VTVATWNVN-SIRAR-----IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57
           + + T+N++           +H +   +   N DI+ LQE                    
Sbjct: 6   LRILTYNLHKGFNTSNREFTLHPIRDALVATNADIMLLQEI--------QGAHSEHGLTH 57

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
           +   ++ +        +       +            +      + + + +        +
Sbjct: 58  QHWPKEPHFEFLASDVWPHYAYAKNAVYSVGHHGNAILSKYPLQSWENINVSPFTWASRS 117

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
            +           +   +      + +E    F              +         F  
Sbjct: 118 LLHGEIKLPWSDDVLHIICIHLGLIGMERRRQFVTL--CERIDAHVPHDAPLIVAGDFND 175

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
              Q+ ++L           T    +  ++  +           RI +  + P       
Sbjct: 176 WAGQAEKRLSQHLNLKEAFRTLHNRYARTWPSWMPVLKMD----RIYYRGMEPIICERPP 231

Query: 238 SARIDTKPRGWTKPSDHTPVIVSLDI 263
            +        W + SDH P++ S ++
Sbjct: 232 HST-------WNRLSDHAPLLASFEL 250


>gi|319645540|ref|ZP_07999772.1| hypothetical protein HMPREF1012_00805 [Bacillus sp. BT1B_CT2]
 gi|317392426|gb|EFV73221.1| hypothetical protein HMPREF1012_00805 [Bacillus sp. BT1B_CT2]
          Length = 214

 Score = 37.1 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 20/58 (34%), Gaps = 12/58 (20%)

Query: 200 DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257
                ++   +           R+D+I LSP     + +A I          SDH P+
Sbjct: 163 QYGQGFTHPSHRPR-------RRLDYIFLSPSF--HVSAAEI---VAVDPNASDHLPL 208


>gi|317475689|ref|ZP_07934949.1| oxidoreductase family protein [Bacteroides eggerthii 1_2_48FAA]
 gi|316908145|gb|EFV29839.1| oxidoreductase family protein [Bacteroides eggerthii 1_2_48FAA]
          Length = 511

 Score = 37.1 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 18/138 (13%), Positives = 40/138 (28%), Gaps = 9/138 (6%)

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYN-IIPQPHDCYNPIIWENDACFT 176
            I +         +       +  +E+   +     ++ I        + +I EN     
Sbjct: 140 YIATDWLHHFPVAMCAMENGKNVAIEVPSAMNLKECWDLINMSEKTRKHCMILENCCYDW 199

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWD-YYADSWSKNKGIRIDH-------IML 228
            E+         +            H+L  FW+ Y+ +  S   G R+D+       +  
Sbjct: 200 FEMNTLNMAQHGVFGEVIRAQGAYIHNLSPFWNHYWKNGESDKLGWRLDYNMRHRGDVYA 259

Query: 229 SPEATSLLHSARIDTKPR 246
           +     +  +  I    R
Sbjct: 260 THGLGPVAQALDIHRGDR 277


>gi|302832782|ref|XP_002947955.1| hypothetical protein VOLCADRAFT_88385 [Volvox carteri f. nagariensis]
 gi|300266757|gb|EFJ50943.1| hypothetical protein VOLCADRAFT_88385 [Volvox carteri f. nagariensis]
          Length = 1491

 Score = 37.1 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 3/35 (8%)

Query: 7    ATWNVNSIRARIHNLAAWIK-ENNPDI--ICLQET 38
            ATWNVN  R    +L  W++     DI  I LQE 
Sbjct: 1039 ATWNVNETRPASQSLRKWLEPAAKADIVSISLQEV 1073


>gi|239928478|ref|ZP_04685431.1| hypothetical protein SghaA1_09638 [Streptomyces ghanaensis ATCC
           14672]
 gi|291436804|ref|ZP_06576194.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
 gi|291339699|gb|EFE66655.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
          Length = 290

 Score = 37.1 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 7/42 (16%)

Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           RID + +SP+ T  +  A         T+ SDH PV+  L +
Sbjct: 251 RIDLVTVSPDIT--VVGAE-----AVATRASDHRPVVADLRL 285


>gi|158341378|ref|YP_001522543.1| hypothetical protein AM1_G0049 [Acaryochloris marina MBIC11017]
 gi|158311619|gb|ABW33229.1| hypothetical protein AM1_G0049 [Acaryochloris marina MBIC11017]
          Length = 401

 Score = 37.1 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 11/50 (22%)

Query: 223 IDHIMLSPEATSLLHSARI--------DTKPRGWTKPSDHTPVIVSLDIP 264
           +D I LS +A    + + I        D  P G    SDH PV   +D+ 
Sbjct: 237 LDFIFLSGDAKKWSNQSEILFKGSSFCDNDPTG---ASDHFPVQAIIDLD 283


>gi|21241048|ref|NP_640630.1| nuclease [Xanthomonas axonopodis pv. citri str. 306]
 gi|21106341|gb|AAM35166.1| nuclease [Xanthomonas axonopodis pv. citri str. 306]
          Length = 609

 Score = 37.1 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 22/56 (39%), Gaps = 14/56 (25%)

Query: 222 RIDHIMLSPEATSLLHSA---RIDTKPR-----------GWTKPSDHTPVIVSLDI 263
           R+DH +LSP     L  A    ++               G  + SDH PV++   +
Sbjct: 554 RLDHALLSPAMAKQLRGAAEWHVNADVMDAAGYAKRNLPGPWRSSDHDPVLLGFSL 609


>gi|268318329|ref|YP_003292048.1| glucosamine-6-phosphate isomerase [Rhodothermus marinus DSM 4252]
 gi|262335863|gb|ACY49660.1| glucosamine-6-phosphate isomerase [Rhodothermus marinus DSM 4252]
          Length = 642

 Score = 37.1 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 25/208 (12%), Positives = 47/208 (22%), Gaps = 19/208 (9%)

Query: 15  RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKY 74
           RAR   +  +     P                 E +Q L  HI      +   V  L+  
Sbjct: 426 RARQQEILDFFARKKP------------GEVDLEVIQKLKAHIRYAEAVAGIEVVGLTAE 473

Query: 75  QPIEIVTHLPGDDLDVQARFIEATFTINTQTLR--IGNLYLPHGNPITSTKYDDKISWIK 132
               +           +    EA   I    L     +     G+               
Sbjct: 474 HARFLDMPFYKTGTVRKDPIGEADIRIVLDLLEEIHPHHIFVAGDLSDPHGTHRMCYTAI 533

Query: 133 RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFT 192
           +       R    E       Y    Q  + +   ++   +   L+ +            
Sbjct: 534 QQALQRYHRAHPREEWPLVWLYRGAWQEWEVHQADVFLPMSKADLDRKIEAIFKHESQKD 593

Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKG 220
            A+         +  W     +  +N+G
Sbjct: 594 RAMFPGAYDDREF--W---QRARDRNRG 616


>gi|145615065|ref|XP_001414248.1| hypothetical protein MGG_13020 [Magnaporthe oryzae 70-15]
 gi|145021989|gb|EDK06009.1| hypothetical protein MGG_13020 [Magnaporthe oryzae 70-15]
          Length = 697

 Score = 37.1 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 3/50 (6%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTED--KNFPFETLQSLNYHIETCGQKS 64
           R   +   I+E + D +CLQE  TE   ++F  E L  L+Y      +  
Sbjct: 353 RRRKIYQEIEERDADFLCLQEVTTEAFREDFSPE-LAKLDYKGIHFPRTK 401


>gi|288802726|ref|ZP_06408164.1| endonuclease/Exonuclease/phosphatase [Prevotella melaninogenica
           D18]
 gi|288334876|gb|EFC73313.1| endonuclease/Exonuclease/phosphatase [Prevotella melaninogenica
           D18]
          Length = 324

 Score = 37.1 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 30/258 (11%), Positives = 65/258 (25%), Gaps = 44/258 (17%)

Query: 30  PDIICLQETKTEDKNFPFET-----LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLP 84
           PDI+ L E   E+ +  F+      L+   Y           G+ +   Y P        
Sbjct: 83  PDIVGLCEV--ENDSVLFDLTRRSLLRKARYEYVMTASNDARGIDVALLYSPFSFRLIKA 140

Query: 85  GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL 144
                +  + +  T       +      +  G+ +                    ++  +
Sbjct: 141 DTIRVIPMKEMRPTRD-----ILHVEGEIESGDTLHVFLLHAPSRMGGELYSRPFRKHVM 195

Query: 145 EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL 204
           E+                    ++ + +        Q   +   +  +      +     
Sbjct: 196 EQLCNVIDSLRRQYVEP--KLLVMGDFNDYADSPSLQLAYEHGLINVSAEAHGCNGAKGT 253

Query: 205 YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI---------------------DT 243
           Y +      +W       +D I++S    S +   RI                       
Sbjct: 254 YRY----HGAWGS-----LDQILVSKNLRSWMIDCRINDARFLLEEDTKYGGVKPRRNYN 304

Query: 244 KPRGWTKPSDHTPVIVSL 261
             R     SDH P+++ L
Sbjct: 305 GMRFNNGFSDHLPLVLRL 322


>gi|124360463|gb|ABN08473.1| reverse transcriptase - beet retrotransposon, putative [Medicago
           truncatula]
          Length = 297

 Score = 37.1 bits (84), Expect = 2.6,   Method: Composition-based stats.
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 3/41 (7%)

Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
           R+D  +LS E   L  +     + RG    SDH P+I+S+D
Sbjct: 14  RLDWFLLSEEWCLLWSNCLQIAQLRGL---SDHCPLILSVD 51


>gi|257886279|ref|ZP_05665932.1| endonuclease/exonuclease/phosphatase [Enterococcus faecium
           1,231,501]
 gi|257822135|gb|EEV49265.1| endonuclease/exonuclease/phosphatase [Enterococcus faecium
           1,231,501]
          Length = 274

 Score = 37.1 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 31/265 (11%), Positives = 62/265 (23%), Gaps = 23/265 (8%)

Query: 19  HNLAAWIKE---NNPDIICLQETKTEDKNFPFETLQSLN-YHIETCGQKSYNGVAILSKY 74
             L     +    + ++I LQE    ++    E ++            +        +  
Sbjct: 15  KKLQELADKILLEDYEVIALQEI---NQLLESEEVEPAKLMKFCPVKNQVPIRKDNFAYR 71

Query: 75  QPIEIVTHLPGDDLDVQARFIEATFTINTQTL----RIGNLYLPHGNPITSTKYDDKISW 130
               +  H        +   I          L     + +  L          Y  +   
Sbjct: 72  LVQLLKEHGKEYFWSWEMSHIGYDKYEEGNALLAKKTLESQVLTVSQSQKKEDYQTRKIL 131

Query: 131 IKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG 190
           I +                +  D               +         +      + + G
Sbjct: 132 IGKTKIDDQDIFVSSCHFSWWTDKKSGFYFEWKNLENYFLETRVPLFFLGDFNNPVDSQG 191

Query: 191 FTDAIRATHDTHHLYSFWDYYADS---------WSKN-KGIRIDHIMLSPEATSLLHSAR 240
           +     +       Y   +    +         W +N + +RID I +S          R
Sbjct: 192 YYTVRESCLLLQDSYVVANEKGKAATVEKKIDGWEQNTEKLRIDFIFVSEGMQVK-KYQR 250

Query: 241 IDTKPRGWTKPSDHTPVIVSLDIPE 265
           I          SDH  V + LD+ E
Sbjct: 251 IFDGI-DSPIISDHYGVEIELDVNE 274


>gi|196044355|ref|ZP_03111591.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus
           03BB108]
 gi|196024994|gb|EDX63665.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus
           03BB108]
          Length = 788

 Score = 37.1 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%)

Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +DHI+++              ++ I  +     + SDH PV+  +D+
Sbjct: 741 LDHILVTNNIAPYTSVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784


>gi|118476676|ref|YP_893827.1| endonuclease/exonuclease/phosphatase [Bacillus thuringiensis str.
           Al Hakam]
 gi|118415901|gb|ABK84320.1| endonuclease/exonuclease/phosphatase [Bacillus thuringiensis str.
           Al Hakam]
          Length = 788

 Score = 37.1 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 9/47 (19%)

Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263
           +DHI+++              ++ I  +     + SDH PV+  +D+
Sbjct: 741 LDHILVTNNIAPYTSVDPVHLNSNIMKE---HGRVSDHDPVLAQIDL 784


>gi|50304665|ref|XP_452288.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49641421|emb|CAH01139.1| KLLA0C02057p [Kluyveromyces lactis]
          Length = 450

 Score = 37.1 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 38/316 (12%), Positives = 82/316 (25%), Gaps = 48/316 (15%)

Query: 4   VTVATWNVNSI----RARIHNLAAWIKE-------------------NNPDIICLQETKT 40
           +   T+N   +    R R   L A  +                       D++ LQE   
Sbjct: 15  IRFLTFNTWGLKYIARFRKQRLTALAERLAGNLDAGNFWDQNPNDTKEQYDVVALQEVWC 74

Query: 41  EDK---NFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA 97
           ++           +   Y     G  S  G+AILSK        +    +    A +   
Sbjct: 75  DEDWNYIVERCKHRYPYYRRFKSGMISGPGLAILSKIPIESTFLYRFPINGRPSAFWRGD 134

Query: 98  TFTINTQTLRI----GNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL--------- 144
            +   + ++ +       Y P     +       ++    +    + +            
Sbjct: 135 WYVGKSISVTLLKRTSPEYPPLAILNSHMHAPYALTGDAAYECHRACQSWDFSKLVKLYK 194

Query: 145 --EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH 202
                ++  GD N  P         I         +             + A + T+   
Sbjct: 195 KAGYSVVVVGDLNSRPGSLPHKFLTIEAGQVDSWEQKFGVQDLKDIAALSPANQITYGGT 254

Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSPE----ATSLLHSARIDTKPRGWTKPSDHTPVI 258
              S  + +  S   ++  R+D+ ++         + +               SDH    
Sbjct: 255 TCDSTLNTWRASRGAHEACRLDYALIDSNTLHTLDAKVTFTETIPNI---GSFSDHFAYS 311

Query: 259 VSLDIPEPRKKQQDST 274
           + L + +  +  Q   
Sbjct: 312 ILLQLKDLTQTDQKPH 327


>gi|303236932|ref|ZP_07323510.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           disiens FB035-09AN]
 gi|302482861|gb|EFL45878.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           disiens FB035-09AN]
          Length = 324

 Score = 37.1 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 10/62 (16%), Positives = 20/62 (32%), Gaps = 21/62 (33%)

Query: 223 IDHIMLSPEATSLLHSARIDTKP---------------------RGWTKPSDHTPVIVSL 261
           +D +++S      +    I+  P                     R     SDH P+++ L
Sbjct: 263 LDQMLISQHLLPKVKQCSINDAPFLIEEDNKYGGVKPRRFYNGMRYNGGFSDHLPLVLDL 322

Query: 262 DI 263
            +
Sbjct: 323 SL 324


>gi|218197220|gb|EEC79647.1| hypothetical protein OsI_20882 [Oryza sativa Indica Group]
          Length = 1784

 Score = 37.1 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 31/264 (11%), Positives = 72/264 (27%), Gaps = 30/264 (11%)

Query: 9   WNVNSI-RAR-IHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYN 66
           WN   I  A  + +L A  +E    ++ L ET+   +       +              +
Sbjct: 6   WNCRGIGNAATVRDLCALSREAGSQLVFLCETRQSVERMRRLRSRLGLRGFVGENCNGMS 65

Query: 67  GVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDD 126
           G   L   + + +      +        +     I   T         +G P    ++  
Sbjct: 66  GGLALFWDESVFVEIKGINERYIDAYVRLSVNDPIWHVTFV-------YGEPRVEHRHRM 118

Query: 127 KISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKL 186
                          L L +       +    +       +    D   T E+     K 
Sbjct: 119 WSMLNSIKQSSNLPWLVLGDFNETLWQFEHFSKKKRSEVQMQAFRDVLQTYELHDLGFKG 178

Query: 187 QNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPR 246
                             Y++ +        N  +R+D ++       +  S++++    
Sbjct: 179 L----------------PYTYDNKREG--INNVRVRLDRVVADDGWRDMFRSSQVEHLI- 219

Query: 247 GWTKPSDHTPVIVSLDIPEPRKKQ 270
             +  S+H PV++   +   +  +
Sbjct: 220 --SPCSNHCPVVLKFCVDTNQPAR 241


>gi|119716549|ref|YP_923514.1| endonuclease/exonuclease/phosphatase [Nocardioides sp. JS614]
 gi|119537210|gb|ABL81827.1| Endonuclease/exonuclease/phosphatase [Nocardioides sp. JS614]
          Length = 929

 Score = 37.1 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 30/77 (38%), Gaps = 21/77 (27%)

Query: 223 IDHIMLSPEATSLLHSARI---------------------DTKPRGWTKPSDHTPVIVSL 261
           +DH++ SP A +++    I                     D    G  + SDH P +V +
Sbjct: 765 LDHVLASPAAAAMVTGVDIWNINADESIAFEYSRYNYNATDFYAPGPYRASDHDPEVVGI 824

Query: 262 DIPEPRKKQQDSTSQNM 278
           D+P         T++++
Sbjct: 825 DLPVIGPVASTVTAEDV 841


>gi|172058551|ref|YP_001815011.1| endonuclease/exonuclease/phosphatase [Exiguobacterium sibiricum
           255-15]
 gi|171991072|gb|ACB61994.1| Endonuclease/exonuclease/phosphatase [Exiguobacterium sibiricum
           255-15]
          Length = 915

 Score = 37.1 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 25/72 (34%), Gaps = 10/72 (13%)

Query: 193 DAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS--ARIDTKPRGWTK 250
                       YS+  Y  ++        +DH+++S        S    I++       
Sbjct: 762 WNTVEDLPKSERYSYV-YNGNAQV------LDHVLISKNLKPYTSSDIVNINSDYMEADG 814

Query: 251 -PSDHTPVIVSL 261
             SDH P I+S+
Sbjct: 815 SASDHDPAIISI 826


>gi|147803018|emb|CAN63923.1| hypothetical protein VITISV_004023 [Vitis vinifera]
          Length = 1081

 Score = 37.1 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 22/57 (38%), Gaps = 11/57 (19%)

Query: 211 YADSWSKNKGI------RIDHIMLSPEATSLLHSARIDTKPRGWTKP-SDHTPVIVS 260
              +++   G+      R+D  ++SP               R   +P SDH PV++ 
Sbjct: 583 QGGAFTWTGGLNNMSKARLDRFLVSPCWLDQFSRVS----QRRLPRPISDHFPVLLE 635


>gi|147771570|emb|CAN60473.1| hypothetical protein VITISV_028413 [Vitis vinifera]
          Length = 1659

 Score = 37.1 bits (84), Expect = 2.7,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 23/60 (38%), Gaps = 7/60 (11%)

Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
               Y++    +   +     R+D  ++S +  +        T PR     SDH P+++ 
Sbjct: 755 QGGPYTW----SGGLNGQSWSRLDRFLISEDWENHFSGVSQCTLPR---PVSDHXPILLD 807


>gi|300712153|ref|YP_003737967.1| endonuclease/exonuclease/phosphatase family protein
           [Halalkalicoccus jeotgali B3]
 gi|299125836|gb|ADJ16175.1| endonuclease/exonuclease/phosphatase family protein
           [Halalkalicoccus jeotgali B3]
          Length = 364

 Score = 37.1 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 9/48 (18%)

Query: 223 IDHIMLSPEATSLLHSARI----DTKPRGW----TKPSDHTPVIVSLD 262
           ID+++ SP+ +    SA +    D+  RG        SDH  V   ++
Sbjct: 317 IDYVLPSPDLSVR-DSAAVWPSEDSDERGLLSDVRTASDHRLVWADIE 363


>gi|293568433|ref|ZP_06679753.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecium E1071]
 gi|291588769|gb|EFF20597.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecium E1071]
          Length = 277

 Score = 37.1 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 33/285 (11%), Positives = 68/285 (23%), Gaps = 31/285 (10%)

Query: 4   VTVATWNVNSIRARI-----HNLAAWIKE---NNPDIICLQETKTEDKNFPFETLQS--L 53
           +   T N +S    +       L     +    + ++I LQE    ++    E ++   L
Sbjct: 1   MKFMTLNTHS---WLEPEPEKKLQELADKILLEDYEVIALQEI---NQLLESEEVEPAKL 54

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR---IGN 110
               +   Q          +   +              +      +      L    + +
Sbjct: 55  MKFCQVKNQVPIRKDNFAYRLVQLLKEHGKEYFWSWEMSHIGYDKYEEGNALLTKKTLES 114

Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170
             L          Y  +   I +                +  D               + 
Sbjct: 115 QVLTVSQSQKKEDYQTRKILIGKTKIDDQDIFVSSCHFSWWTDKKSGFYFEWKNLENYFL 174

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADS---------WSKN-KG 220
                   +      + + G+     +       Y   +    +         W +N + 
Sbjct: 175 ETRVPLFFLGDFNNPVDSQGYYTVRESCLLLQDSYVVANEKGKAATVEKKIDGWEQNTEK 234

Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           +RID I +           RI          SDH  V + LD+ E
Sbjct: 235 LRIDFIFVPEGMQVK-KYQRIFDGI-DSPIISDHYGVEIELDVNE 277


>gi|297607703|ref|NP_001060456.2| Os07g0645500 [Oryza sativa Japonica Group]
 gi|255678013|dbj|BAF22370.2| Os07g0645500 [Oryza sativa Japonica Group]
          Length = 494

 Score = 37.1 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 26/61 (42%), Gaps = 2/61 (3%)

Query: 219 KGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNM 278
            G R+D+I+ SP +                   SDH  V V + I + ++  ++S +Q  
Sbjct: 419 YGTRVDYILASPNSPYKFVPGS--YTVISSKGTSDHHIVKVDVTIQDKKETDEESGNQRQ 476

Query: 279 K 279
           +
Sbjct: 477 R 477



 Score = 36.7 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 16/96 (16%), Positives = 34/96 (35%), Gaps = 4/96 (4%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDK---NFPFETLQSLNY-HIETCGQKSYNGVAILS 72
           R  ++   ++E   DII LQ  + E++   +   E  + L   ++         G A+LS
Sbjct: 172 RRRSVEEVLREVGADIIGLQNVRAEEERGMSPLSELAEGLGMRYVFAESWAPEYGNAVLS 231

Query: 73  KYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRI 108
           ++      +    D  D +              + +
Sbjct: 232 RWPIKRWKSQRVADQSDFRLVSSCPRCLEFPGRVAV 267


>gi|116200858|ref|XP_001226241.1| hypothetical protein CHGG_10974 [Chaetomium globosum CBS 148.51]
 gi|88175688|gb|EAQ83156.1| hypothetical protein CHGG_10974 [Chaetomium globosum CBS 148.51]
          Length = 1567

 Score = 37.1 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 17/53 (32%), Gaps = 4/53 (7%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTS 275
           ID ++ S E    L    I          SDH  +  + D     +  +   +
Sbjct: 616 IDLVLASAELADQLLRCTIHP----CDHGSDHRAIETAFDTTVEDRPSETRHT 664


>gi|116205393|ref|XP_001228507.1| hypothetical protein CHGG_10580 [Chaetomium globosum CBS 148.51]
 gi|88176708|gb|EAQ84176.1| hypothetical protein CHGG_10580 [Chaetomium globosum CBS 148.51]
          Length = 1481

 Score = 37.1 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 17/53 (32%), Gaps = 4/53 (7%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTS 275
           ID ++ S E    L    I          SDH  +  + D     +  +   +
Sbjct: 573 IDLVLASAELADQLLRCTIHP----CDHGSDHRAIETAFDTTVEDRPSETRHT 621


>gi|225429104|ref|XP_002269440.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 656

 Score = 37.1 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 15/166 (9%), Positives = 49/166 (29%), Gaps = 7/166 (4%)

Query: 94  FIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGD 153
                 T+    + +G   +          +    + +        +    EE     G 
Sbjct: 31  ICWDKRTLEMIEMEVGQFSISCRLRNVEDGFVWTFTGVYGPFSRVDREAFWEELGAIRGI 90

Query: 154 YNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD 213
           ++        +N ++ + +      +  + ++   +     +        ++S+    + 
Sbjct: 91  WSDPWCIGGDFNVVLSQRERSSQGRISGAMRRFAQVVDDLELLDLPLQGGVFSW----SG 146

Query: 214 SWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
             +     R+D  +++           I  + R     SDH P+++
Sbjct: 147 GRNNQAWARLDRFLVTQCWPDNF--CGIV-QCRLPRPTSDHFPIML 189


>gi|54302544|ref|YP_132537.1| hypothetical protein PBPRB0865 [Photobacterium profundum SS9]
 gi|46915966|emb|CAG22737.1| hypothetical protein PBPRB0865 [Photobacterium profundum SS9]
          Length = 234

 Score = 37.1 bits (84), Expect = 2.8,   Method: Composition-based stats.
 Identities = 32/244 (13%), Positives = 63/244 (25%), Gaps = 22/244 (9%)

Query: 21  LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIV 80
           + +   E N DI  LQE    +    +      NY     G+                  
Sbjct: 1   MTSIFSEQNIDIAGLQE--AFNDQIIYLARNLSNYGWVGVGRDDGKTKGEAVPIFYRADK 58

Query: 81  T----HLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLR 136
                       +         +  +   +          +      ++     I +  R
Sbjct: 59  YVKLGGGTFWLSETPEVVASVGWDADLTRITSWVRLEDKESSKRVLVFNAHFDHIGKVAR 118

Query: 137 FASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIR 196
             S +L  ++     GD       +D    +   N     +   ++   L N   +  I+
Sbjct: 119 QQSAKLLSKKAKEIIGD------DNDAVIVLGDLNFERSDVASYEALTSLFNDARSTTIK 172

Query: 197 ATHDTHH-LYSFWDYYADSWSKNKGIRIDHIMLSPEAT-SLLHSARIDTKPRGWTKPSDH 254
                    Y++  Y+           ID+I ++ +   +      I          SDH
Sbjct: 173 PFEGIDGKEYTYHGYFKKPTED-----IDYIFVNDKLRVNTFKYVNIIKD---GIYSSDH 224

Query: 255 TPVI 258
             VI
Sbjct: 225 LSVI 228


>gi|115675789|ref|XP_793350.2| PREDICTED: similar to endonuclease/reverse transcriptase
          [Strongylocentrotus purpuratus]
 gi|115942241|ref|XP_001189330.1| PREDICTED: similar to endonuclease/reverse transcriptase
          [Strongylocentrotus purpuratus]
          Length = 810

 Score = 37.1 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 31/70 (44%), Gaps = 3/70 (4%)

Query: 4  VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
          + + + N   ++++     L   I++ +PDIIC  E+  E   +  E     NY I    
Sbjct: 29 LKLLSINCRGLKSKKKQRDLLGAIQQEDPDIICGCESHLEGSYYTSEIF-PRNYDIYRKD 87

Query: 62 QKSYNGVAIL 71
          ++ + G   +
Sbjct: 88 RERHGGGVFI 97


>gi|108864566|gb|ABA94593.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1469

 Score = 37.1 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 18/130 (13%), Positives = 41/130 (31%), Gaps = 13/130 (10%)

Query: 157 IPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWS 216
                     +   ++  + +    +    Q   F+   R        +++ D       
Sbjct: 541 RHNMWSMLRSLRNSSNLPWLVIGDFNEALWQFEHFSSHPRGEPQMGTPFTY-DNKRQGR- 598

Query: 217 KNKGIRIDHIMLSPEATSLLHSARI--DTKPRGWTKPSDHTPVIVSL--DIPEPRKKQ-- 270
            N  +R+D  +          +A +     PR     SDH P+ + L  ++ +P +K+  
Sbjct: 599 NNVRVRLDRAIADNAWRDTFPNATLAHLASPR-----SDHCPISLQLSQEMKQPARKKIL 653

Query: 271 QDSTSQNMKP 280
                   +P
Sbjct: 654 HYEICWEREP 663


>gi|315181613|gb|ADT88526.1| Metal-dependent hydrolase [Vibrio furnissii NCTC 11218]
          Length = 264

 Score = 37.1 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 17/47 (36%), Gaps = 11/47 (23%)

Query: 223 IDHIMLSPEATS------LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           IDHI++SP   +         S  +          SDH P+   L  
Sbjct: 223 IDHIIVSPTLKASDTQQVNFESQDVLRYAL-----SDHCPLRSELQW 264


>gi|225449792|ref|XP_002271720.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 2499

 Score = 37.1 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 20/45 (44%), Gaps = 4/45 (8%)

Query: 217 KNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
            N+   R+D  + +P        +R+  + R     SDH PV++ 
Sbjct: 945 NNQTWARLDRFLATPNWLD--QYSRVL-QRRLPCPTSDHFPVLLE 986


>gi|293557058|ref|ZP_06675618.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecium E1039]
 gi|291600878|gb|EFF31170.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecium E1039]
          Length = 277

 Score = 37.1 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 33/285 (11%), Positives = 67/285 (23%), Gaps = 31/285 (10%)

Query: 4   VTVATWNVNSIRARI-----HNLAAWIKE---NNPDIICLQETKTEDKNFPFETLQSLN- 54
           +   T N +S    +       L     +    + ++I LQE    ++    E ++    
Sbjct: 1   MKFMTLNTHS---WLEPEPEKKLQELADKILLEDYEVIALQEI---NQLLESEEVEPAKL 54

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL----RIGN 110
                   +        +      +  H        +   I          L     + +
Sbjct: 55  MKFCPVKNQVPIRKDNFAYRLVQLLKEHGKEYFWSWEMSHIGYDKYEEGNALLAKKTLES 114

Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170
             L          Y  +   I +                +  D               + 
Sbjct: 115 QVLTVSQSQKKEDYQTRKILIGKTKIDDQDIFVSSCHFSWWTDKKSGFYFEWKNLENYFL 174

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADS---------WSKN-KG 220
                   +      + + G+     +       Y   +    +         W +N + 
Sbjct: 175 ETRVPLFFLGDFNNPVDSQGYYTVRESCLLLQDSYVVANEKGKAATVEKKIDGWEQNTEK 234

Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           +RID I +           RI          SDH  V + LD+ E
Sbjct: 235 LRIDFIFVPEGMQVK-KYQRIFDGI-DSPIISDHYGVEIELDVNE 277


>gi|29290095|gb|AAO67565.1| Pol protein [Drosophila americana]
          Length = 1517

 Score = 37.1 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 34/269 (12%), Positives = 72/269 (26%), Gaps = 41/269 (15%)

Query: 5   TVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS----------LN 54
            +A WN   +  +   + A++  +N DI+ + E +         +++             
Sbjct: 63  KMAYWNAAGVSNKCREMEAFMCHHNVDIMMVIELRQRASQSASNSVRGPFANNVSPSIDG 122

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           YH     +K+ N                  G         ++         + +      
Sbjct: 123 YHTYVATRKAPNQRFGGVAILI------RHGIKHIALEPIMQDACQCAPVAITLSTQETI 176

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
              PI       K +        +       +  I  GD+N             W  +  
Sbjct: 177 LVAPIYCPPQ-YKWTSENFGKLLSHIDSLSPQGFIICGDWNAK---------STWWGNMR 226

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
                R+  + + +    + +          + + Y       N+   ID  +       
Sbjct: 227 HCQRGRELLRTIHSNKKYNILA-----TGGTTHYPYARG----NQPSAIDFAIYGGIGDR 277

Query: 235 LLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            L +  I          SDH P+++ L I
Sbjct: 278 RLRTYSI------NDLNSDHLPILIDLAI 300


>gi|289566966|ref|ZP_06447369.1| endonuclease/exonuclease/phosphatase [Enterococcus faecium D344SRF]
 gi|294613977|ref|ZP_06693909.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecium E1636]
 gi|289161234|gb|EFD09131.1| endonuclease/exonuclease/phosphatase [Enterococcus faecium D344SRF]
 gi|291593171|gb|EFF24748.1| endonuclease/exonuclease/phosphatase family protein [Enterococcus
           faecium E1636]
          Length = 277

 Score = 37.1 bits (84), Expect = 2.9,   Method: Composition-based stats.
 Identities = 33/285 (11%), Positives = 67/285 (23%), Gaps = 31/285 (10%)

Query: 4   VTVATWNVNSIRARI-----HNLAAWIKE---NNPDIICLQETKTEDKNFPFETLQSLN- 54
           +   T N +S    +       L     +    + ++I LQE    ++    E ++    
Sbjct: 1   MKFMTLNTHS---WLEPEPEKKLQELADKILLEDYEVIALQEI---NQLLESEEVEPAKL 54

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL----RIGN 110
                   +        +      +  H        +   I          L     + +
Sbjct: 55  MKFCPVKNQVPIRKDNFAYRLVQLLKEHGKEYFWSWEMSHIGYDKYEEGNALLTKKTLES 114

Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170
             L          Y  +   I +                +  D               + 
Sbjct: 115 QVLTVSQSQKKEDYQTRKILIGKTKIDDQDIFVSSCHFSWWTDKKSGFYFEWKNLENYFL 174

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADS---------WSKN-KG 220
                   +      + + G+     +       Y   +    +         W +N + 
Sbjct: 175 ETRVPLFFLGDFNNPVDSQGYYTVRESCLLLQDSYVVANEKGKAATVEKKIDGWEQNTEK 234

Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           +RID I +           RI          SDH  V + LD+ E
Sbjct: 235 LRIDFIFVPEGMQVK-KYQRIFDGI-DSPIISDHYGVEIELDVNE 277


>gi|322712256|gb|EFZ03829.1| reverse transcriptase, putative [Metarhizium anisopliae ARSEF 23]
          Length = 1111

 Score = 37.1 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 23/61 (37%), Gaps = 5/61 (8%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV--IVSLDIPEPRKKQQDSTSQNMKP 280
           ID    + + T  +   +ID    G    SDH P+   +  +       ++   S+   P
Sbjct: 45  IDLTFATEDLTRHVTHCKIDG---GLDCDSDHLPIDTALDWEWKAATVTRKRLWSKTKIP 101

Query: 281 I 281
           I
Sbjct: 102 I 102


>gi|330924640|ref|XP_003300719.1| hypothetical protein PTT_12052 [Pyrenophora teres f. teres 0-1]
 gi|311325004|gb|EFQ91187.1| hypothetical protein PTT_12052 [Pyrenophora teres f. teres 0-1]
          Length = 617

 Score = 37.1 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 22/45 (48%), Gaps = 4/45 (8%)

Query: 223 IDHIMLSPEATSLLHSAR----IDTKPRGWTKPSDHTPVIVSLDI 263
           +DH+ +SP       +A     ++T P    + SDH P +  L++
Sbjct: 571 LDHMYVSPSLAKKSKAAYEHIHVNTWPEFAAQVSDHDPSVAKLNV 615


>gi|209881847|ref|XP_002142361.1| endonuclease/exonuclease/phosphatase family protein
           [Cryptosporidium muris RN66]
 gi|209557967|gb|EEA08012.1| endonuclease/exonuclease/phosphatase family protein
           [Cryptosporidium muris RN66]
          Length = 675

 Score = 37.1 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 17/142 (11%), Positives = 35/142 (24%), Gaps = 1/142 (0%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDK-NFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75
           R   +   + + + DI+CLQE ++     F    L   NY+     +    G       +
Sbjct: 335 RRSLIIQELIDLDADILCLQEVQSSTFVQFYQPILAYYNYNGCIAERDKEKGGVATFMKK 394

Query: 76  PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135
               + +      + +              +          N  T  ++    S      
Sbjct: 395 DKFNIINSHCIHFNSRFIENYPDLVEKISIMWPQFFTNLFYNISTVYQFTIAESIYGSMY 454

Query: 136 RFASQRLELEEPLIFAGDYNII 157
              +  L             I 
Sbjct: 455 LVINTHLFYHPNGGHVRILQIK 476


>gi|189198097|ref|XP_001935386.1| endonuclease/exonuclease/phosphatase family protein [Pyrenophora
           tritici-repentis Pt-1C-BFP]
 gi|187981334|gb|EDU47960.1| endonuclease/exonuclease/phosphatase family protein [Pyrenophora
           tritici-repentis Pt-1C-BFP]
          Length = 607

 Score = 37.1 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 22/45 (48%), Gaps = 4/45 (8%)

Query: 223 IDHIMLSPEATSLLHSAR----IDTKPRGWTKPSDHTPVIVSLDI 263
           +DH+ +SP       +A     ++T P    + SDH P +  L++
Sbjct: 561 LDHMYVSPSLAKKSKAAYEHIHVNTWPEFAAQVSDHDPSVAKLNV 605


>gi|124360675|gb|ABN08664.1| reverse transcriptase - beet retrotransposon, putative [Medicago
           truncatula]
          Length = 324

 Score = 37.1 bits (84), Expect = 3.0,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 3/41 (7%)

Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
           R+D I+LS   T+L  +      PRG     DH P+++++D
Sbjct: 3   RLDRILLSESWTALFPNCIQVALPRGLL---DHCPILLTID 40


>gi|146100536|ref|XP_001468887.1| hypothetical protein [Leishmania infantum]
 gi|134073256|emb|CAM71979.1| conserved hypothetical protein [Leishmania infantum JPCM5]
          Length = 531

 Score = 37.1 bits (84), Expect = 3.1,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 27/68 (39%), Gaps = 8/68 (11%)

Query: 3   VVTVATWNV-NSIRARIHNLAAWIKENNPDIICLQET-----KTEDKNFPFETLQSLNYH 56
              V  WN+   ++  +  + A +K  + D I LQE      ++   N P E  ++L   
Sbjct: 42  TFRVVQWNIERGVK--LDAIIADLKALHADFIVLQELDINCRRSNYANVPKEIAKALEAE 99

Query: 57  IETCGQKS 64
           +    +  
Sbjct: 100 LYFACEFQ 107


>gi|294646774|ref|ZP_06724397.1| conserved domain protein [Bacteroides ovatus SD CC 2a]
 gi|292637934|gb|EFF56329.1| conserved domain protein [Bacteroides ovatus SD CC 2a]
          Length = 201

 Score = 37.1 bits (84), Expect = 3.1,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 10/79 (12%)

Query: 3   VVTVATWNVNSIR------ARIHNLAAWIKENNPDIICLQETKTEDK---NFPFETLQSL 53
           V+TVAT+NV++        +    +A++++    DI+C QE    D+   +     L + 
Sbjct: 109 VLTVATYNVDAFNHEHTGYSC-KEIASYMRNLQADILCFQEFGINDEFGIDSISAALSNW 167

Query: 54  NYHIETCGQKSYNGVAILS 72
            YH      +    VA   
Sbjct: 168 PYHYIPSSPEGKKSVATGC 186


>gi|255068805|emb|CBA11992.1| endonuclease-reverse transcriptase HmRTE-e01 [Heliconius
          melpomene]
          Length = 990

 Score = 37.1 bits (84), Expect = 3.1,   Method: Composition-based stats.
 Identities = 12/36 (33%), Positives = 17/36 (47%)

Query: 4  VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETK 39
          +  ATWN+ S+  R   LA  +         LQET+
Sbjct: 51 LRFATWNIGSLTGRCRELADVLMRRRVQCAFLQETR 86


>gi|46906561|ref|YP_012950.1| endonuclease/exonuclease/phosphatase family protein [Listeria
           monocytogenes str. 4b F2365]
 gi|47091460|ref|ZP_00229257.1| endonuclease/exonuclease/phosphatase family protein [Listeria
           monocytogenes str. 4b H7858]
 gi|46879826|gb|AAT03127.1| endonuclease/exonuclease/phosphatase family protein [Listeria
           monocytogenes serotype 4b str. F2365]
 gi|47020137|gb|EAL10873.1| endonuclease/exonuclease/phosphatase family protein [Listeria
           monocytogenes str. 4b H7858]
 gi|328467778|gb|EGF38824.1| endonuclease/exonuclease/phosphatase family protein [Listeria
           monocytogenes 1816]
          Length = 257

 Score = 37.1 bits (84), Expect = 3.1,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 2/37 (5%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
           ID+I +S E    + S    T        SDH PV+ 
Sbjct: 218 IDYIFVSNEF--HICSYETSTDEIDGCSASDHFPVMA 252


>gi|325914373|ref|ZP_08176720.1| putative extracellular nuclease [Xanthomonas vesicatoria ATCC
           35937]
 gi|325539381|gb|EGD11030.1| putative extracellular nuclease [Xanthomonas vesicatoria ATCC
           35937]
          Length = 572

 Score = 37.1 bits (84), Expect = 3.1,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 22/56 (39%), Gaps = 14/56 (25%)

Query: 222 RIDHIMLSPEATSLLHSAR---IDTKPR-----------GWTKPSDHTPVIVSLDI 263
           R+DH +LSP     L  A    ++               G  + SDH PV++   +
Sbjct: 517 RLDHALLSPAMAKQLRGAVEWHVNADAMDDAGYAKRNLPGPWRSSDHDPVLLGFSL 572


>gi|256391129|ref|YP_003112693.1| endonuclease/exonuclease/phosphatase [Catenulispora acidiphila DSM
           44928]
 gi|256357355|gb|ACU70852.1| Endonuclease/exonuclease/phosphatase [Catenulispora acidiphila DSM
           44928]
          Length = 802

 Score = 37.1 bits (84), Expect = 3.1,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 25/63 (39%), Gaps = 8/63 (12%)

Query: 200 DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
            T+  Y++ DY   S        +DHI++S      L    +        + SDH P +V
Sbjct: 747 PTNEQYTY-DYEGVSEV------LDHILVSKGIKD-LSYQVVHVNAEYTDQASDHDPQVV 798

Query: 260 SLD 262
            + 
Sbjct: 799 RIK 801


>gi|297194844|ref|ZP_06912242.1| endonuclease/exonuclease/phosphatase [Streptomyces
           pristinaespiralis ATCC 25486]
 gi|197720692|gb|EDY64600.1| endonuclease/exonuclease/phosphatase [Streptomyces
           pristinaespiralis ATCC 25486]
          Length = 247

 Score = 37.1 bits (84), Expect = 3.1,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 19/45 (42%), Gaps = 3/45 (6%)

Query: 222 RIDHIMLSPEATSLLHSARI-DTKPRGWTKPSDHTPVIVSLDIPE 265
           RID +  +      +    + D  P      SDH PV+ +L IP 
Sbjct: 203 RIDAVFATEGVE--VLGCGVPDLPPADLRAASDHLPVLAALRIPA 245


>gi|94501571|ref|ZP_01308088.1| hypothetical protein RED65_08314 [Oceanobacter sp. RED65]
 gi|94426254|gb|EAT11245.1| hypothetical protein RED65_08314 [Oceanobacter sp. RED65]
          Length = 275

 Score = 37.1 bits (84), Expect = 3.1,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 19/43 (44%), Gaps = 7/43 (16%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           +DHI++S      +    +          SDH P+ + + +P+
Sbjct: 235 LDHILVSEGV--QVKRLAVLDVA-----VSDHLPIAMEIALPD 270


>gi|329963123|ref|ZP_08300903.1| oxidoreductase, NAD-binding domain protein [Bacteroides fluxus YIT
           12057]
 gi|328529164|gb|EGF56094.1| oxidoreductase, NAD-binding domain protein [Bacteroides fluxus YIT
           12057]
          Length = 515

 Score = 37.1 bits (84), Expect = 3.1,   Method: Composition-based stats.
 Identities = 19/135 (14%), Positives = 37/135 (27%), Gaps = 9/135 (6%)

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
               +           +  +  +     L    D  I     +  + +I EN      E+
Sbjct: 145 DWLHHFPVAKCALENGKHVAIEVPSAMNLQECWDL-INLSEANRKHCMILENCCYDWFEM 203

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDY-YADSWSKNKGIRIDH-------IMLSPE 231
                  Q +            H+L  FWDY + +      G R+D+       +  +  
Sbjct: 204 NTLNMAQQGVFGEVIRAQGAYIHNLEPFWDYYWKNGEGDKLGWRLDYNMKHRGDVYATHG 263

Query: 232 ATSLLHSARIDTKPR 246
              +  +  I    R
Sbjct: 264 LGPVAQALDIHRGDR 278


>gi|330934643|ref|XP_003304635.1| hypothetical protein PTT_17284 [Pyrenophora teres f. teres 0-1]
 gi|311318650|gb|EFQ87267.1| hypothetical protein PTT_17284 [Pyrenophora teres f. teres 0-1]
          Length = 257

 Score = 37.1 bits (84), Expect = 3.1,   Method: Composition-based stats.
 Identities = 32/259 (12%), Positives = 71/259 (27%), Gaps = 32/259 (12%)

Query: 30  PDIICLQETKTEDKNFPFETLQSL---NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGD 86
            D++ LQE     +       +     N++       ++     +S     ++     G 
Sbjct: 14  ADVVFLQEV--SKEGLAALIEEPWIQQNWYTSDANASAFGNQKFISITLVSKLWVATDGI 71

Query: 87  DLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEE 146
            L    R    +            L     +    +    ++  +       +  L   +
Sbjct: 72  LLGAIWRISLPSRFGRDALCCDLILNSSSKHTSGRSSLRIRLINVHLDSLPINPSLRPYQ 131

Query: 147 PLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYS 206
             I A   + + +               F   + +    ++     DA    H  +  Y+
Sbjct: 132 LFISASYLSAVGRGIIA---------GDFNPVLPEDDDLVRTNDLIDAWAHLHPNNPGYT 182

Query: 207 FWDYYADSWSKNKGIRID---HIMLSPEATSLLHSARI----------DTKPRGWTKPSD 253
           +  Y   S+  N   R+D      L+P    +L ++ +            +       SD
Sbjct: 183 WGVYGEQSFPPN---RLDKVALFNLTPSGMGILQTSELGFCGEKTSAGLKESFSKAHFSD 239

Query: 254 HTPVIVSLDIPEPRKKQQD 272
           H  +    DI     + Q 
Sbjct: 240 HLGLWC--DIGWVEDRPQP 256


>gi|322502896|emb|CBZ37978.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 531

 Score = 37.1 bits (84), Expect = 3.2,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 27/68 (39%), Gaps = 8/68 (11%)

Query: 3   VVTVATWNV-NSIRARIHNLAAWIKENNPDIICLQET-----KTEDKNFPFETLQSLNYH 56
              V  WN+   ++  +  + A +K  + D I LQE      ++   N P E  ++L   
Sbjct: 42  TFRVVQWNIERGVK--LDAIIADLKALHADFIVLQELDINCRRSNYANVPKEIAKALEAE 99

Query: 57  IETCGQKS 64
           +    +  
Sbjct: 100 LYFACEFQ 107


>gi|164662056|ref|XP_001732150.1| hypothetical protein MGL_0743 [Malassezia globosa CBS 7966]
 gi|159106052|gb|EDP44936.1| hypothetical protein MGL_0743 [Malassezia globosa CBS 7966]
          Length = 1201

 Score = 37.1 bits (84), Expect = 3.2,   Method: Composition-based stats.
 Identities = 10/147 (6%), Positives = 26/147 (17%), Gaps = 9/147 (6%)

Query: 76  PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135
            +++   + G  +  Q       +            +            D  +   +   
Sbjct: 571 WLKVWQWMQGPKMPKQHIIKHYPWWPWQHLEAAWLRWTAPLAWKPPASSDLPLWGSEEAP 630

Query: 136 RFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAI 195
               +       +         P          W          R     +         
Sbjct: 631 SIELEPTNHMHTIPT-----PPPAKQGGTPGQRWWAKIEC-DWQRNWLHWIILCAVCIGW 684

Query: 196 RATHDTHHLYSFWDYYADSWSKNKGIR 222
                    Y+++         N+G R
Sbjct: 685 LFCFSVMVHYTWFSARIL---TNEGWR 708


>gi|254932552|ref|ZP_05265911.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes
           HPB2262]
 gi|293584109|gb|EFF96141.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes
           HPB2262]
 gi|328476050|gb|EGF46765.1| endonuclease/exonuclease/phosphatase family protein [Listeria
           monocytogenes 220]
          Length = 257

 Score = 37.1 bits (84), Expect = 3.2,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 2/37 (5%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
           ID+I +S E    + S    T        SDH PV+ 
Sbjct: 218 IDYIFVSNEF--HICSYETSTDEIDGCSASDHFPVMA 252


>gi|146307309|ref|YP_001187774.1| endonuclease/exonuclease/phosphatase [Pseudomonas mendocina ymp]
 gi|145575510|gb|ABP85042.1| Endonuclease/exonuclease/phosphatase [Pseudomonas mendocina ymp]
          Length = 262

 Score = 37.1 bits (84), Expect = 3.2,   Method: Composition-based stats.
 Identities = 27/252 (10%), Positives = 61/252 (24%), Gaps = 30/252 (11%)

Query: 15  RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKY 74
           R  +  L + ++    D++ LQE          +  Q                    S +
Sbjct: 38  RFILPELRSAVQATGADLVFLQEV-LGSHAMHAKRFQDW-------PSVPQYEFLADSMW 89

Query: 75  QPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRF 134
                  +      D     +     +    L +          +         + +   
Sbjct: 90  PQFAYGRNAVYPAGDHGNALLSRFPILEYHNLDVTVSGTEQRGLLHCRLDVPGHAEVHAI 149

Query: 135 LRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDA 194
                 R       +      +          +       F    +++  +L     T+ 
Sbjct: 150 CVHLGLRERHRRQQLGLLLDLLATLAPAAPVIVA----GDFNDWRQRADDQLAPHALTEV 205

Query: 195 IRATHDTHHLYSFWDYYADSWS-KNKGIRIDHIMLSPE--ATSLLHSARIDTKPRGWTKP 251
            +  H            A S+  +   +R+D I +         + S       R W+  
Sbjct: 206 FKHHHGKP---------ARSFPARCPLLRLDRIYVRNATALKPQVLST------RPWSHL 250

Query: 252 SDHTPVIVSLDI 263
           SDH P+   + +
Sbjct: 251 SDHAPLAAEIHL 262


>gi|6323517|ref|NP_013588.1| Ngl3p [Saccharomyces cerevisiae S288c]
 gi|2497064|sp|Q03210|NGL3_YEAST RecName: Full=Probable RNA exonuclease NGL3
 gi|151946045|gb|EDN64276.1| conserved protein [Saccharomyces cerevisiae YJM789]
 gi|285813885|tpg|DAA09780.1| TPA: Ngl3p [Saccharomyces cerevisiae S288c]
          Length = 505

 Score = 37.1 bits (84), Expect = 3.2,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 20/47 (42%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           R   L   +K+  PD++ LQE    + NF  E    L + +     +
Sbjct: 139 RSKVLVHELKKYRPDVVSLQEVDYNELNFWQENFHKLGFDVIFKRHE 185


>gi|307109204|gb|EFN57442.1| hypothetical protein CHLNCDRAFT_50978 [Chlorella variabilis]
          Length = 226

 Score = 37.1 bits (84), Expect = 3.2,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 26/65 (40%), Gaps = 8/65 (12%)

Query: 13  SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPF--ETLQSLNYHIETCGQKSYNGVAI 70
           S R+R+  +   I  ++PDI+CLQE       FP     LQ   Y      +       +
Sbjct: 96  SFRSRL--IIREILHHSPDIVCLQEV----DRFPEFQHALQPHGYEGVFTKRTGDRSDGL 149

Query: 71  LSKYQ 75
              ++
Sbjct: 150 AMFWR 154


>gi|288574157|ref|ZP_06392514.1| Endonuclease/exonuclease/phosphatase [Dethiosulfovibrio
           peptidovorans DSM 11002]
 gi|288569898|gb|EFC91455.1| Endonuclease/exonuclease/phosphatase [Dethiosulfovibrio
           peptidovorans DSM 11002]
          Length = 242

 Score = 37.1 bits (84), Expect = 3.2,   Method: Composition-based stats.
 Identities = 31/281 (11%), Positives = 67/281 (23%), Gaps = 60/281 (21%)

Query: 4   VTVATWNV------------------NSIRA--RIHNLAAWIKENNPDIICLQETKTEDK 43
           + +  +NV                  N  R+  R   +  ++   +PDII L E      
Sbjct: 1   MRLILYNVRYGTGTGLSYHVPAPFSGNFRRSTGRFKRITDYLMNLSPDIIGLVEV----- 55

Query: 44  NFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
                       +      ++    + +  +    +        L V             
Sbjct: 56  --------DGGSYRHGGNCQAETAASSMGGHHRFAVKYSERISRLPVLRS-QGNAIVSRL 106

Query: 104 QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
             ++     L  G    + +       +         R    +        +   +P   
Sbjct: 107 PPIKTDCHDLGRGMKRNALEVAYGDFSLILVHLSLGSRSRRHQIRALRDLCSARERPLIL 166

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223
                   +     E     ++       +    T+                 + +   +
Sbjct: 167 AGDY----NTLSGPEELAPLRETGMASVNELGLPTYPCR------------RPRKE---L 207

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
           D +++S E         I    R     SDH P+I  L+I 
Sbjct: 208 DFVLISEEI--STKGFFI-PDVR----FSDHLPLICDLEIS 241


>gi|322832105|ref|YP_004212132.1| Endonuclease/exonuclease/phosphatase [Rahnella sp. Y9602]
 gi|321167306|gb|ADW73005.1| Endonuclease/exonuclease/phosphatase [Rahnella sp. Y9602]
          Length = 370

 Score = 37.1 bits (84), Expect = 3.2,   Method: Composition-based stats.
 Identities = 41/272 (15%), Positives = 70/272 (25%), Gaps = 40/272 (14%)

Query: 2   SVVTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           S + +   NV +       L A ++   PDI+ L ET                       
Sbjct: 101 SRIKIMNSNVLTTNREPEKLLAQVRHYQPDILVLLET----DQ------------WWEDQ 144

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
               +     S   P+E +  +                  +          LP G  +  
Sbjct: 145 MAELDADYPHSLRCPLENLYGMHVYSRLPMQAAKIQYLVADDIPSMHFRAELPSGEQVIL 204

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
                            S+  EL      A             N + W       +++  
Sbjct: 205 HCLHPMPPSPTEADESTSRDGELVAVGHTAAKARYPTIVTGDLNDVAWSRTTRLFMKISG 264

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
                +  G  +   A++                       +DH+  S + T       I
Sbjct: 265 LLDPRRGRGMYNTFHASYPFLR-----------------WPLDHVFHSKDFT------LI 301

Query: 242 DTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDS 273
           D K R     SDH P++V L +   +   Q+S
Sbjct: 302 DLK-RLDFMGSDHFPILVELALTPSQGIDQES 332


>gi|271967547|ref|YP_003341743.1| metal-dependent hydrolase-like protein [Streptosporangium roseum
           DSM 43021]
 gi|270510722|gb|ACZ89000.1| Metal-dependent hydrolase-like protein [Streptosporangium roseum
           DSM 43021]
          Length = 617

 Score = 37.1 bits (84), Expect = 3.2,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 7/39 (17%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           IDH++++P  T     A +D         SDH P+ V+L
Sbjct: 582 IDHVLVTPGFTGR-DQANVD------VPHSDHRPIAVTL 613


>gi|147768250|emb|CAN73611.1| hypothetical protein VITISV_023626 [Vitis vinifera]
          Length = 293

 Score = 37.1 bits (84), Expect = 3.2,   Method: Composition-based stats.
 Identities = 7/19 (36%), Positives = 14/19 (73%)

Query: 21  LAAWIKENNPDIICLQETK 39
           +  +++  NPD++ +QETK
Sbjct: 89  VKDFLRLENPDVVMIQETK 107


>gi|281344662|gb|EFB20246.1| hypothetical protein PANDA_012098 [Ailuropoda melanoleuca]
          Length = 126

 Score = 37.1 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 38/110 (34%), Gaps = 12/110 (10%)

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPE 231
                 E R     L  M F D  RA H     Y+F+     ++S     R DHI+    
Sbjct: 14  KQKINKETRALNDTLDKMDFIDIFRAFHPEAIEYTFFSSAHGTFS-----RTDHILGHES 68

Query: 232 ATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
             +      I           DH+   + L +   RK  +++ +  +K I
Sbjct: 69  GLNWYQKIGIILCIFL-----DHSA--LKLKLSHKRKFGRNTNTWRLKSI 111


>gi|281421494|ref|ZP_06252493.1| endonuclease/Exonuclease/phosphatase family protein [Prevotella
           copri DSM 18205]
 gi|281404566|gb|EFB35246.1| endonuclease/Exonuclease/phosphatase family protein [Prevotella
           copri DSM 18205]
          Length = 335

 Score = 37.1 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 24/65 (36%), Gaps = 22/65 (33%)

Query: 221 IR-IDHIMLSPEATSLLHSARI--------DTKPRGWTKP-------------SDHTPVI 258
            R +D I+ SP  + L  S +I        D +  G  KP             SDH P++
Sbjct: 266 WRSLDQILFSPSLSRLKMSCQIGDLPFLLEDDEKYGGKKPFRTYLGPRYLGGYSDHLPLV 325

Query: 259 VSLDI 263
               I
Sbjct: 326 AKFKI 330


>gi|147844291|emb|CAN80038.1| hypothetical protein VITISV_040550 [Vitis vinifera]
          Length = 869

 Score = 37.1 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 21/40 (52%), Gaps = 2/40 (5%)

Query: 4   VTVATWNVNSIRA--RIHNLAAWIKENNPDIICLQETKTE 41
           + + + NV  I    +   + + I  ++ +++C QETK +
Sbjct: 637 LRILSLNVRGINKGDKRKAIKSLICSHSANLVCRQETKVQ 676


>gi|50548277|ref|XP_501608.1| YALI0C08657p [Yarrowia lipolytica]
 gi|49647475|emb|CAG81911.1| YALI0C08657p [Yarrowia lipolytica]
          Length = 455

 Score = 37.1 bits (84), Expect = 3.3,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 31/78 (39%), Gaps = 20/78 (25%)

Query: 199 HDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT-------------KP 245
           H     +S W   A +W   +G+ +D+I +S   +  +    +               +P
Sbjct: 384 HKKEPRFSNW---AHAW---RGL-LDYIFVSSNNSDEVQVKSLLKMPLEEDMGPEPSGQP 436

Query: 246 RGWTKPSDHTPVIVSLDI 263
           R    PSDH  ++  +++
Sbjct: 437 RIDMYPSDHLAIMAEVEL 454


>gi|147765313|emb|CAN66945.1| hypothetical protein VITISV_020092 [Vitis vinifera]
          Length = 894

 Score = 36.7 bits (83), Expect = 3.3,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 21/61 (34%), Gaps = 9/61 (14%)

Query: 201 THHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
              ++++          N+   R+D  +++        S     + R     SDH PV +
Sbjct: 163 QGGVFTW-----SGGPNNQSWARLDRFLVNTSWLDQFSSVL---QSRLPRPLSDHFPVSL 214

Query: 260 S 260
            
Sbjct: 215 E 215


>gi|260771675|ref|ZP_05880594.1| exodeoxyribonuclease III [Vibrio metschnikovii CIP 69.14]
 gi|260613259|gb|EEX38459.1| exodeoxyribonuclease III [Vibrio metschnikovii CIP 69.14]
          Length = 265

 Score = 36.7 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 27/254 (10%), Positives = 66/254 (25%), Gaps = 28/254 (11%)

Query: 25  IKENNPDIICLQETK------TEDKNFPFE---TLQSLNYHIETCGQKSYNGVAILSKYQ 75
           I E   D++ LQE          D N          +  Y ++    +      +   + 
Sbjct: 24  IIEQGCDVVALQEVNQHQNSPAVDSNILTNHTVLADNYGYLLQKKLMEYGYHYQLTWDFV 83

Query: 76  PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFL 135
                 +  G     +   +E      +    +          I  T      +      
Sbjct: 84  HQSYDVYQEGLAFLTRLPIVEHEVIDLSDNYDVNFWKHRRAVRIKVTSQRGDFNLYNCHC 143

Query: 136 RFASQ------RLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNM 189
            + S                 + + + +    +  + I  E              ++  +
Sbjct: 144 GWWSDSESSFEDQFNRIKATLSTELSFLLGDFNNPSHIRNEGYDYVLQCGLIDCYEIAEI 203

Query: 190 GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT 249
             +      +        W+  + +      +RID ++ +      +   ++      + 
Sbjct: 204 KDSGTTVIKNIDG-----WEQNSQA------LRIDLVLSNQPMV--VKQHQVIFNNDFYP 250

Query: 250 KPSDHTPVIVSLDI 263
             SDH  V+V +DI
Sbjct: 251 VVSDHFGVLVEVDI 264


>gi|226222950|ref|YP_002757057.1| hypothetical protein Lm4b_00342 [Listeria monocytogenes Clip81459]
 gi|225875412|emb|CAS04109.1| Hypothetical protein of unknown function [Listeria monocytogenes
           serotype 4b str. CLIP 80459]
          Length = 257

 Score = 36.7 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 2/37 (5%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
           ID+I +S E    + S    T        SDH PV+ 
Sbjct: 218 IDYIFVSNEF--HICSYETSTDEIDGCSASDHFPVMA 252


>gi|514357|gb|AAA72722.1| invplved in the development of the embryonic central nervous system
           [Drosophila melanogaster]
          Length = 530

 Score = 36.7 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 12/160 (7%), Positives = 37/160 (23%), Gaps = 2/160 (1%)

Query: 34  CLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR 93
           CL E K ++     + ++S     +      +    I           +           
Sbjct: 109 CLGEIKCQNNATCIDGVESYKCECQPGFSGEFCDTKIQFCSPEFNPCANGAKCMDHFTHY 168

Query: 94  FIEATFTINTQTLR--IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFA 151
             +     +       I +          +          +    +  +  E    +   
Sbjct: 169 SCDCQAGFHGTNCTDNIDDCQNHMCQNGGTCVDGINDYQCRCPDDYTGKYCEGHNMISMM 228

Query: 152 GDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191
                  Q H+C + + ++ +A  +  + +          
Sbjct: 229 YPQTSPCQNHECKHGVCFQPNAQGSDYLCRCHPGYTGKWC 268


>gi|332172322|gb|AEE21576.1| Endonuclease/exonuclease/phosphatase [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 391

 Score = 36.7 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 19/52 (36%), Gaps = 10/52 (19%)

Query: 221 IRIDHIMLSPEATSLLHSARI---------DTKPRGWTKPSDHTPVIVSLDI 263
           +R D+++ S      +  + +             R     SDH  V V +DI
Sbjct: 339 MRADYVIPSKALGE-VTDSGVFWPTPQDPLHRLIRDRQASSDHRLVWVDVDI 389


>gi|302814903|ref|XP_002989134.1| hypothetical protein SELMODRAFT_427751 [Selaginella moellendorffii]
 gi|300143034|gb|EFJ09728.1| hypothetical protein SELMODRAFT_427751 [Selaginella moellendorffii]
          Length = 1303

 Score = 36.7 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 32/260 (12%), Positives = 67/260 (25%), Gaps = 32/260 (12%)

Query: 45   FPFET-LQSLN-YHIETCGQ-----KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA 97
             PF   L+ +  YH     +        N   + S     +        +  V       
Sbjct: 967  IPFAWPLRPMGPYHWVERQRLGSARGFRNEHRLSSMDLVYKFTKGKYFWNPAVSCSGGTL 1026

Query: 98   TFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII 157
                      +    +         ++      +     +A      E    +    + I
Sbjct: 1027 IVVKGQWESLVEEHAILVPGRAQCVQFKIGDMLVGLLNVYAPAGSSSERADFWNELVHRI 1086

Query: 158  PQPHDCYNPIIWEN--------------DACFTLEVRQSFQKLQNMGFTDAIRATH--DT 201
            P     +      N              D   + E     Q +  +G  D          
Sbjct: 1087 PAQPSTWMVTGDFNFVEEVLDKDGGEMRDKRTSRERAMWAQLVLALGLEDTYNIPGFVQH 1146

Query: 202  HHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
               +++ ++      +    R+D   +SPE      ++       G+   SDH  V ++L
Sbjct: 1147 QPRFTWQEHQQRGIQR----RLDRFYVSPEL---CRNSGKLDITTGYRDFSDHNSVSLTL 1199

Query: 262  DI--PEPRKKQQDSTSQNMK 279
             I      K+    + +N +
Sbjct: 1200 PILKRWGTKRPAPVSRKNFE 1219


>gi|300123561|emb|CBK24833.2| unnamed protein product [Blastocystis hominis]
          Length = 491

 Score = 36.7 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 46/316 (14%), Positives = 90/316 (28%), Gaps = 66/316 (20%)

Query: 1   MSV---VTVATWN----------VNSIR------ARIHNLAAWIKENNPDIICLQETKTE 41
           MS+   + + ++N          +   R       R+  +AA ++  +PDII LQE + +
Sbjct: 180 MSLHPRLRIVSYNAWNTMPASWFITGERRFDWFYKRMQLMAANLRAADPDIIVLQEIRYD 239

Query: 42  D---KN---FPFETLQSL--NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR 93
           +        F    L  L  +Y         YN      + + + +++  P    D    
Sbjct: 240 ETLGDQRRRFQLRHLTELLPDYQYIFQPANMYNEHGSRVE-EGVAVLSKFPIRRQDYILL 298

Query: 94  FIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGD 153
             + T   +     + +  +   +  T   Y   +S  +       + L        A +
Sbjct: 299 SRDYTDKQDDHQRLVLHAQIAVPSIGTIHVYGTHLSLSEAARDRTVRELSDFIDWNGANE 358

Query: 154 YNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYAD 213
           +++     +               E+       ++          H      S       
Sbjct: 359 FSVFCGDLNAEPDSAAIRYLIGKGELGGKRTNYKDA-----FLQVHPEPKPRS---PSEG 410

Query: 214 SWSK-------NKGIRIDHIML---------------------SPEATSLLHSARIDTKP 245
           + +K       N   RID+I+                      S   T  L +  +    
Sbjct: 411 ARAKALTFPTDNPVKRIDYIIYKQGSGVHVRVDDSQLIGLKPWSGTETDDLKAGMMSKDS 470

Query: 246 RGWTKPSDHTPVIVSL 261
             W  PSDH  V    
Sbjct: 471 ALW--PSDHRGVYADF 484


>gi|50414810|ref|XP_457434.1| DEHA2B11044p [Debaryomyces hansenii CBS767]
 gi|49653099|emb|CAG85438.1| DEHA2B11044p [Debaryomyces hansenii]
          Length = 306

 Score = 36.7 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 2/41 (4%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           ID I  +     ++    ID +  G    SDH PV    ++
Sbjct: 268 IDFIWTTKG-VPIVKHEIIDHECNGS-YCSDHRPVTAIFEV 306


>gi|32483159|emb|CAE02147.1| OSJNBa0081G05.2 [Oryza sativa Japonica Group]
 gi|116309213|emb|CAH66305.1| OSIGBa0135K14.2 [Oryza sativa Indica Group]
 gi|116309230|emb|CAH66320.1| OSIGBa0150M16.3 [Oryza sativa Indica Group]
          Length = 1711

 Score = 36.7 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 21/190 (11%), Positives = 54/190 (28%), Gaps = 11/190 (5%)

Query: 97  ATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNI 156
                 +  ++  N          S+                  R  +   L      + 
Sbjct: 618 YWDESVSVDVKDINKRYIDAYVRLSSDEPQWHITFVYGEPRVENRHRMWSLLRTIRQSSA 677

Query: 157 IPQPH--DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADS 214
           +P     D    +                Q  ++  +   ++        +++ D   D 
Sbjct: 678 LPWMVIGDFNETLWQFEHFSKNPRCETQMQNFRDALYDCDLQDLGFKGVPHTY-DNRRDG 736

Query: 215 WSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDST 274
           W +N  +R+D  +   +   L   A++       +  SDH+P+++   + +  + +Q   
Sbjct: 737 W-RNVKVRLDRAVADDKWRDLFPEAQVSHLV---SPCSDHSPILLEFIVKDTTRPRQKCL 792

Query: 275 S----QNMKP 280
                   +P
Sbjct: 793 HYEIVWEREP 802


>gi|115803163|ref|XP_783572.2| PREDICTED: similar to reverse transcriptase-like protein
           [Strongylocentrotus purpuratus]
 gi|115958751|ref|XP_001196705.1| PREDICTED: similar to reverse transcriptase-like protein
           [Strongylocentrotus purpuratus]
          Length = 1028

 Score = 36.7 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 14/114 (12%), Positives = 39/114 (34%), Gaps = 9/114 (7%)

Query: 5   TVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQ-------SLNY 55
             A WN  SI+A+     +  ++ +++ D++ L ET   + +     +          ++
Sbjct: 133 RFALWNARSIKAKGKATTVCDYVIQDHIDVLALTETWLTNTDRDHHAIATIRKTLVKYDF 192

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIG 109
           H       +  GV ++       +            +     + T + + + + 
Sbjct: 193 HHIPQATSTGGGVGVILHKAFDVVFHDRHAFSSFEYSDLTIHSSTKHLRLVTVY 246


>gi|294508721|ref|YP_003572780.1| Endonuclease/exonuclease/phosphatase family protein [Salinibacter
           ruber M8]
 gi|294345050|emb|CBH25828.1| Endonuclease/exonuclease/phosphatase family protein [Salinibacter
           ruber M8]
          Length = 358

 Score = 36.7 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 18/46 (39%), Gaps = 3/46 (6%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268
           IDHI+ SP+    +              PSDH  V  +L +    +
Sbjct: 300 IDHILYSPQFFEAV---DTKRWCGRPAPPSDHCAVTAALRLTSRAE 342


>gi|218194668|gb|EEC77095.1| hypothetical protein OsI_15508 [Oryza sativa Indica Group]
          Length = 1296

 Score = 36.7 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 28/223 (12%), Positives = 64/223 (28%), Gaps = 11/223 (4%)

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
                  +S   P  +     G D++     +EAT       ++  N          S  
Sbjct: 410 DQTNTGAVSGVTPRALKRLKKGADMNASGEDMEATSPGAAVDVKDINKRYIDAYVRLSPD 469

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH--DCYNPIIWENDACFTLEVRQ 181
                            R  +   L      + +P     D    +              
Sbjct: 470 EPQWHITFVYGETRVENRHRMWSLLRTIRQSSALPWMVIGDFNETLWQFEHFSKNPRCET 529

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             Q  ++  +   ++        +++ D   D W +N  +R+D  +   +   L   A++
Sbjct: 530 QMQNFRDALYDCDLQDLGFKGVPHTY-DNRRDGW-RNVKVRLDRAVADDKWRDLFPEAQV 587

Query: 242 DTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTS----QNMKP 280
                  +  SDH+P+++   + +  + +Q           +P
Sbjct: 588 SHLV---SPCSDHSPILLEFIVKDTTRPRQKCLRYEIVWEREP 627


>gi|126734997|ref|ZP_01750743.1| possible endonuclease/exonuclease/phosphatase family protein
          [Roseobacter sp. CCS2]
 gi|126715552|gb|EBA12417.1| possible endonuclease/exonuclease/phosphatase family protein
          [Roseobacter sp. CCS2]
          Length = 399

 Score = 36.7 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 22/63 (34%), Gaps = 32/63 (50%)

Query: 1  MSVVTVATWNVNSIRARIHNLA---------------------AWIKEN----NPDIICL 35
          MS  T+A++NV        NL                      AW+ +     N D++C 
Sbjct: 1  MSRFTIASFNV-------KNLIEAEEEYYRFEEYTPEEYAWKRAWLADQLLTMNADVVCF 53

Query: 36 QET 38
          QE 
Sbjct: 54 QEI 56


>gi|45199199|ref|NP_986228.1| AFR680Wp [Ashbya gossypii ATCC 10895]
 gi|44985339|gb|AAS54052.1| AFR680Wp [Ashbya gossypii ATCC 10895]
          Length = 461

 Score = 36.7 bits (83), Expect = 3.4,   Method: Composition-based stats.
 Identities = 35/259 (13%), Positives = 78/259 (30%), Gaps = 40/259 (15%)

Query: 27  ENNPD---IICLQETKTEDK-NFPFETLQS-LNYH-IETCGQKSYNGVAILSKYQPIEIV 80
           E + D   ++ LQE   +   ++  +  +    YH     G  +  G+AILSK       
Sbjct: 77  EEDADEYDVVALQEVWCKKDWDYIVDRCKGRYPYHRWFLSGIVAGPGLAILSKIPIESTF 136

Query: 81  THLPGDDLDVQARFIEATFTINTQTLRI---------------GNLYLPHGNPITSTKYD 125
            +    +    A +    +   + ++ +                +++ P+G         
Sbjct: 137 LYRFPINGRPSAFWRGDWYVGKSVSITLLRPTGPNAAPLCIMNSHMHAPYGLDGDEAYEC 196

Query: 126 DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQK 185
            +      F R AS   +    ++  GD N  P                      Q   +
Sbjct: 197 HRACQAWDFSRLASVYRKSGYAVVIVGDLNSRPGSLPYKLLTHETGLEDSWE---QLNGE 253

Query: 186 LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG----IRIDHIMLSPEATSLLHSARI 241
                    +      +   +      ++W  ++G     R+D+ ++ P+    + ++  
Sbjct: 254 QDLQYIARLLPMDQIKYGGVTCNSTL-NTWRADRGPQEACRLDYALVDPDRLETIKAS-- 310

Query: 242 DTKPRGWTK------PSDH 254
               R   +       SDH
Sbjct: 311 ---VRFTERIPNVGSFSDH 326


>gi|147784566|emb|CAN70489.1| hypothetical protein VITISV_008665 [Vitis vinifera]
          Length = 450

 Score = 36.7 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 3/38 (7%)

Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
           R+DH ++S E       + I           DH P+I+
Sbjct: 316 RLDHFLVSNEWEDHF--SGISQFAFXVIAF-DHCPIIL 350


>gi|147793829|emb|CAN71156.1| hypothetical protein VITISV_036760 [Vitis vinifera]
          Length = 1793

 Score = 36.7 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 25/225 (11%), Positives = 62/225 (27%), Gaps = 28/225 (12%)

Query: 36   QETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFI 95
            QETK ++       ++SL           +  V        I ++      +L    +  
Sbjct: 890  QETKIQE--MSMGIVRSLG----VGRFLDWGAVDSRGAAGGIVVIWDNRMLELVDMQK-- 941

Query: 96   EATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYN 155
                        I   +    +      +    + +        +    EE     G +N
Sbjct: 942  --------GLFSISCTFKSCEDG-----FIWTFTGVYGPTLRRKRESFWEELGAIKGLWN 988

Query: 156  IIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW 215
                    +N I+   ++     +    ++   +     ++        +++        
Sbjct: 989  GPWCVAGDFNAILRPEESSRGGSLNSIMRRFXEVIEELELKDLPXVGGPFTW----TGGT 1044

Query: 216  SKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
                  R+D  +++ E  S    A    +       SDH P+++ 
Sbjct: 1045 DNQSFSRLDRFLVNEEWDSHFGDA---RQFLLPRPVSDHFPILMD 1086


>gi|288962170|ref|YP_003452465.1| hypothetical protein AZL_d00950 [Azospirillum sp. B510]
 gi|288914436|dbj|BAI75921.1| hypothetical protein AZL_d00950 [Azospirillum sp. B510]
          Length = 333

 Score = 36.7 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 19/54 (35%), Gaps = 8/54 (14%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWT-----KPSD---HTPVIVSLDIPEPRK 268
           +DH++ SP     L    I  +           PS    H PV+    +   ++
Sbjct: 275 LDHLLASPRLAEGLRQVAIHNEDLTDEVDHADGPSPVSYHAPVVAGFSLQPRQE 328


>gi|225452374|ref|XP_002273505.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 800

 Score = 36.7 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 9/59 (15%), Positives = 20/59 (33%), Gaps = 7/59 (11%)

Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
              ++S+    +         R+D  +++               PR     SDH P+++
Sbjct: 99  QGGVFSW----SGGRDNQSWARLDRYLVTQNWLDKFCGVVQCRLPR---PTSDHFPILL 150


>gi|224008777|ref|XP_002293347.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220970747|gb|EED89083.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 1064

 Score = 36.7 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 11/120 (9%), Positives = 24/120 (20%)

Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167
           I              ++D             +     E    +  + + +          
Sbjct: 83  IFVQMEALTGWPAKDEWDFWGLGDSNHPFIKANYPHHEGVWGWGSNADQVVMMVRNIRKS 142

Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227
           + E                 N    +           Y++ D      +   G  ID+ M
Sbjct: 143 MVEYHDFLWDIGYAKTWDDANEYLENLYNERPPIEDFYAWRDDRVMDEAHWYGWFIDYWM 202


>gi|121699269|ref|XP_001267965.1| sphingomyelinase family protein, putative [Aspergillus clavatus
           NRRL 1]
 gi|119396107|gb|EAW06539.1| sphingomyelinase family protein, putative [Aspergillus clavatus
           NRRL 1]
          Length = 482

 Score = 36.7 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 40/343 (11%), Positives = 76/343 (22%), Gaps = 65/343 (18%)

Query: 4   VTVATWNVNSIR-------ARIHNLAAWIKENNP--DIICLQETKTEDK-----NFPFET 49
           + + T N   ++        R+  +   +   +P   I+ LQE  T+           + 
Sbjct: 18  IRILTLNCWGLKYISKFRHERMSEIGRQLAIADPPPQIVGLQECWTQQDYESIRQQTRDI 77

Query: 50  LQSLNYHI---------ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT 100
           L    ++                                        +          F 
Sbjct: 78  LPYGKFYFGGIFGAGLAILSKWPIEESSMFAYPLNGRPTAFFRGDWFVGKGVACARIRFG 137

Query: 101 INTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRL---ELEEPLIFAGDYNII 157
              Q +        H                 +    A       E    +I  GD+N+I
Sbjct: 138 PAAQDVAEVFCTHLHAPYEREPHDSYLCHRTAQAWEIAKLMRGAAERGHLVIGLGDFNMI 197

Query: 158 P--------------QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHH 203
           P              +             A      +Q  + + +  F  +         
Sbjct: 198 PSSFAHRLIHAHAPVRDVWQVLHPDSSVGATIDPPEQQRNKPMPSAAFNLSENGATCDGK 257

Query: 204 LYSF-WDYYADSW-------------SKNKGIRIDHIMLS--------PEATSLLHSARI 241
             ++ W                        G R+D+I +         P A   + S  I
Sbjct: 258 FNTWRWSKEDRKRLEKGHDVVVDPDAPCPYGKRLDYIFVGDGGFPPDYPAARWSVESVAI 317

Query: 242 ---DTKPRGWTKPSDHTPVIVSLDIPEPRKKQQDSTSQNMKPI 281
                 P      SDH  V   +        + D+    + P+
Sbjct: 318 GMTQRHPTLRCSLSDHFAVEAVIARDVASAGKSDAKEMVIHPV 360


>gi|115374836|ref|ZP_01462110.1| endonuclease/exonuclease/phosphatase family [Stigmatella aurantiaca
           DW4/3-1]
 gi|310817631|ref|YP_003949989.1| ap endonuclease, family 1 [Stigmatella aurantiaca DW4/3-1]
 gi|115368145|gb|EAU67106.1| endonuclease/exonuclease/phosphatase family [Stigmatella aurantiaca
           DW4/3-1]
 gi|309390703|gb|ADO68162.1| AP endonuclease, family 1 [Stigmatella aurantiaca DW4/3-1]
          Length = 269

 Score = 36.7 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 21/52 (40%), Gaps = 7/52 (13%)

Query: 215 WSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEP 266
              + G RID   +SP  T+                 SDH PV +++ +P P
Sbjct: 225 RGPDTGSRIDGFYVSPAITTNNLH-------LLPQTGSDHRPVQMTIGVPAP 269


>gi|124505041|ref|XP_001351262.1| endonuclease/exonuclease/phosphatase family protein, putative
           [Plasmodium falciparum 3D7]
 gi|7768299|emb|CAB11122.2| endonuclease/exonuclease/phosphatase family protein, putative
           [Plasmodium falciparum 3D7]
          Length = 906

 Score = 36.7 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 48/216 (22%), Gaps = 17/216 (7%)

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           + I     K+ N + ++S               L                 L      + 
Sbjct: 701 FQIGIYMHKNTNSIFLISNTHFYFHSLAQHIRALQSYTILHILQTLKKKYQLTYPEKEVY 760

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
               I +  ++                    +    A  +       D Y  +       
Sbjct: 761 ---IILNGDFNTNFDSEVFHFIQGKDISPTSDIWFNAQLFKKEFDDLDKYPNLFELEKNK 817

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS 234
              E       L    F     A       ++ W+        N    +D+I LS     
Sbjct: 818 NNNEQSIIGPHLDRKKFMPLYSAYTKQDIQFTNWN-------NNFIDVLDYIFLSTNIKV 870

Query: 235 LLHSARIDTK-------PRGWTKPSDHTPVIVSLDI 263
                 ID +             PSDH  +   +++
Sbjct: 871 RKVLKGIDKECFQKYKGALSPINPSDHISIAAEVEL 906


>gi|116198421|ref|XP_001225022.1| hypothetical protein CHGG_07366 [Chaetomium globosum CBS 148.51]
 gi|88178645|gb|EAQ86113.1| hypothetical protein CHGG_07366 [Chaetomium globosum CBS 148.51]
          Length = 346

 Score = 36.7 bits (83), Expect = 3.5,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 21/55 (38%), Gaps = 3/55 (5%)

Query: 17 RIHNLAAWIKENNPDIICLQETKTED--KNFPFETLQSLNYHIETCGQKSYNGVA 69
          R   +   + E + DI+CLQE    D  ++F    L    Y      +     +A
Sbjct: 40 RSERILQELHERDADILCLQEI-ATDVFRDFFSPELAQDGYKGVHWPRPKAKTMA 93


>gi|327259312|ref|XP_003214482.1| PREDICTED: protein angel homolog 1-like [Anolis carolinensis]
          Length = 660

 Score = 36.7 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 26/65 (40%), Gaps = 5/65 (7%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFE---TLQSLNYHIETCGQKSYNGVAILSK 73
           R+ N+   I+  +PDI+CLQE   ++ +F  +    L  + +      +           
Sbjct: 284 RLTNILQEIQHWDPDILCLQEI--QENHFWEQLEPALTMMGFTCIYKRRTGRKTDGCAIC 341

Query: 74  YQPIE 78
           Y+   
Sbjct: 342 YKQNM 346


>gi|319785687|ref|YP_004145162.1| endonuclease/exonuclease/phosphatase [Pseudoxanthomonas suwonensis
           11-1]
 gi|317464199|gb|ADV25931.1| Endonuclease/exonuclease/phosphatase [Pseudoxanthomonas suwonensis
           11-1]
          Length = 575

 Score = 36.7 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 23/56 (41%), Gaps = 14/56 (25%)

Query: 222 RIDHIMLSPEATSLLHSA---RID-----------TKPRGWTKPSDHTPVIVSLDI 263
           R+DH +LSP     L  A    ++               G  + SDH P+++  D+
Sbjct: 520 RLDHALLSPSLVPALRGAAEWHVNADEPDDAGYAGRNEPGPWRSSDHDPLLLGFDL 575


>gi|284434618|gb|ADB85341.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 486

 Score = 36.7 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 10/91 (10%), Positives = 28/91 (30%), Gaps = 7/91 (7%)

Query: 170 ENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLS 229
             D   +    +         + + +         Y++ +        N    +D + +S
Sbjct: 159 MGDKNSSNYNWKLIDMFNEFIYENDLIEIKKGGGKYTWTNKQKCPILVN----LDRVFVS 214

Query: 230 PEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
            +  +      +    R     SDH P++++
Sbjct: 215 LDWEAKFPLCHVQCLLR---VGSDHCPILLT 242


>gi|326479013|gb|EGE03023.1| glucose-repressible alcohol dehydrogenase transcriptional effector
           [Trichophyton equinum CBS 127.97]
          Length = 612

 Score = 36.7 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 17  RIHNLAAWIKENNPDIICLQET 38
           R   L + I+  + DI+CLQE 
Sbjct: 330 RRDLLLSEIRGQDADIVCLQEV 351


>gi|326476302|gb|EGE00312.1| glucose-repressible alcohol dehydrogenase transcriptional effector
           [Trichophyton tonsurans CBS 112818]
          Length = 707

 Score = 36.7 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 17  RIHNLAAWIKENNPDIICLQET 38
           R   L + I+  + DI+CLQE 
Sbjct: 355 RRDLLLSEIRGQDADIVCLQEV 376


>gi|327294443|ref|XP_003231917.1| glucose-repressible alcohol dehydrogenase transcriptional effector
           [Trichophyton rubrum CBS 118892]
 gi|326465862|gb|EGD91315.1| glucose-repressible alcohol dehydrogenase transcriptional effector
           [Trichophyton rubrum CBS 118892]
          Length = 802

 Score = 36.7 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 17  RIHNLAAWIKENNPDIICLQET 38
           R   L + I+  + DI+CLQE 
Sbjct: 450 RRDLLLSEIRGQDADIVCLQEV 471


>gi|315056461|ref|XP_003177605.1| glucose-repressible alcohol dehydrogenase transcriptional effector
           protein [Arthroderma gypseum CBS 118893]
 gi|311339451|gb|EFQ98653.1| glucose-repressible alcohol dehydrogenase transcriptional effector
           protein [Arthroderma gypseum CBS 118893]
          Length = 801

 Score = 36.7 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 17  RIHNLAAWIKENNPDIICLQET 38
           R   L + I+  + DI+CLQE 
Sbjct: 449 RRDLLLSEIRGQDADIVCLQEV 470


>gi|302665175|ref|XP_003024200.1| hypothetical protein TRV_01633 [Trichophyton verrucosum HKI 0517]
 gi|291188246|gb|EFE43589.1| hypothetical protein TRV_01633 [Trichophyton verrucosum HKI 0517]
          Length = 693

 Score = 36.7 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 17  RIHNLAAWIKENNPDIICLQET 38
           R   L + I+  + DI+CLQE 
Sbjct: 341 RRDLLLSEIRGQDADIVCLQEV 362


>gi|302503490|ref|XP_003013705.1| hypothetical protein ARB_00156 [Arthroderma benhamiae CBS 112371]
 gi|291177270|gb|EFE33065.1| hypothetical protein ARB_00156 [Arthroderma benhamiae CBS 112371]
          Length = 691

 Score = 36.7 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 17  RIHNLAAWIKENNPDIICLQET 38
           R   L + I+  + DI+CLQE 
Sbjct: 339 RRDLLLSEIRGQDADIVCLQEV 360


>gi|296826702|ref|XP_002851020.1| glucose-repressible alcohol dehydrogenase transcriptional effector
           [Arthroderma otae CBS 113480]
 gi|238838574|gb|EEQ28236.1| glucose-repressible alcohol dehydrogenase transcriptional effector
           [Arthroderma otae CBS 113480]
          Length = 703

 Score = 36.7 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 17  RIHNLAAWIKENNPDIICLQET 38
           R   L + I+  + DI+CLQE 
Sbjct: 352 RRDLLLSEIRGQDADIVCLQEV 373


>gi|294633236|ref|ZP_06711795.1| secreted protein [Streptomyces sp. e14]
 gi|292831017|gb|EFF89367.1| secreted protein [Streptomyces sp. e14]
          Length = 299

 Score = 36.7 bits (83), Expect = 3.6,   Method: Composition-based stats.
 Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 7/43 (16%)

Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
           RID I  SP        A +       T  SDH PV+  L +P
Sbjct: 260 RIDVIATSP-------DAVVTRARTVDTAASDHRPVVADLLLP 295


>gi|254418585|ref|ZP_05032309.1| endonuclease/exonuclease/phosphatase family [Brevundimonas sp.
           BAL3]
 gi|196184762|gb|EDX79738.1| endonuclease/exonuclease/phosphatase family [Brevundimonas sp.
           BAL3]
          Length = 317

 Score = 36.7 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 10/54 (18%)

Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           W     +++   GI ID +  SP+    L S RI     G    SDH PV+   
Sbjct: 269 WPSRLPAFA---GITIDQVYRSPDLA--LISRRI-----GEPTGSDHYPVVTEF 312


>gi|190572318|ref|YP_001970163.1| hypothetical protein Smlt0242 [Stenotrophomonas maltophilia K279a]
 gi|190010240|emb|CAQ43848.1| unnamed protein product [Stenotrophomonas maltophilia K279a]
          Length = 570

 Score = 36.7 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 21/55 (38%), Gaps = 14/55 (25%)

Query: 222 RIDHIMLSPEATSLLHSA--------------RIDTKPRGWTKPSDHTPVIVSLD 262
           R+DH +LSP     L  A                    +G  + SDH P+++  D
Sbjct: 515 RLDHALLSPGMAKRLRGAAEWHSNADEQDASGYQGRNVQGPWRSSDHDPLLLGFD 569


>gi|89055881|ref|YP_511332.1| endonuclease/exonuclease/phosphatase [Jannaschia sp. CCS1]
 gi|88865430|gb|ABD56307.1| Endonuclease/exonuclease/phosphatase [Jannaschia sp. CCS1]
          Length = 337

 Score = 36.7 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 17/51 (33%), Gaps = 12/51 (23%)

Query: 223 IDHIMLSPEATSLLH-----------SARIDTKPR-GWTKPSDHTPVIVSL 261
           +D++M+SP                       T  R      SDH PV + L
Sbjct: 286 LDYVMVSPALRLRADRWHIWHPFDDPDCWGQTDLREALLTASDHFPVSLDL 336


>gi|19112103|ref|NP_595311.1| inositol-polyphosphate 5-phosphatase (synaptojanin homolog 2)
           [Schizosaccharomyces pombe 972h-]
 gi|74638872|sp|Q9USQ6|SYJ2_SCHPO RecName: Full=Inositol-1,4,5-trisphosphate 5-phosphatase 2;
           AltName: Full=Synaptojanin-like protein 2
 gi|5830513|emb|CAB54821.1| inositol-polyphosphate 5-phosphatase (synaptojanin homolog 2)
           [Schizosaccharomyces pombe]
          Length = 889

 Score = 36.7 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 18/56 (32%), Gaps = 10/56 (17%)

Query: 209 DYYADSWSKNKGIRIDHIMLSPEATSLL-HSARIDTKPRGWTKPSDHTPVIVSLDI 263
           DY      +      D I+ +   T     S  I        + SDH PV  +  +
Sbjct: 814 DYDTSDKQRVPSW-TDRILATKSFTRNCYKSCDI--------RCSDHRPVFATFSL 860


>gi|24372731|ref|NP_716773.1| hypothetical protein SO_1148 [Shewanella oneidensis MR-1]
 gi|24346800|gb|AAN54218.1|AE015559_2 hypothetical protein SO_1148 [Shewanella oneidensis MR-1]
          Length = 377

 Score = 36.7 bits (83), Expect = 3.7,   Method: Composition-based stats.
 Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 13/58 (22%)

Query: 219 KGIRIDHIMLSPEA-----TSLLHSARIDTKPRGWTKP-------S-DHTPVIVSLDI 263
           KG  +D+I+LS E       SL       T  R   +P       S DH PV V L +
Sbjct: 318 KGSVLDYILLSNEFDASDSRSLAQVVDYQTCDRHLVRPEYERDAYSTDHAPVWVELAL 375


>gi|195997029|ref|XP_002108383.1| hypothetical protein TRIADDRAFT_18427 [Trichoplax adhaerens]
 gi|190589159|gb|EDV29181.1| hypothetical protein TRIADDRAFT_18427 [Trichoplax adhaerens]
          Length = 378

 Score = 36.7 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 11/109 (10%), Positives = 28/109 (25%), Gaps = 1/109 (0%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTED-KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQ 75
           R   +   + + N DI+CLQE   +   N+    ++   Y      +   N     + ++
Sbjct: 36  RKEKIINELYQLNADIVCLQEVHDQHYHNYIKPMMKRKGYIGAYEKRFGNNFDGCATFFK 95

Query: 76  PIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY 124
             +                           + +             + +
Sbjct: 96  KTKFNMVQRCRVDYHVNGVSLMDRDNIGLIVMLEYRNPTSNRRHGQSNH 144


>gi|146276446|ref|YP_001166605.1| endonuclease/exonuclease/phosphatase [Rhodobacter sphaeroides ATCC
           17025]
 gi|145554687|gb|ABP69300.1| Endonuclease/exonuclease/phosphatase [Rhodobacter sphaeroides ATCC
           17025]
          Length = 339

 Score = 36.7 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 20/53 (37%), Gaps = 12/53 (22%)

Query: 223 IDHIMLSPEATSLLHSARI---DTKP---------RGWTKPSDHTPVIVSLDI 263
           +D IM+SP+        RI      P               SDH PV + +++
Sbjct: 287 LDFIMISPDLAEKGPRWRIWHPLNDPNCFRIPELQEALLAASDHFPVTLDIEL 339


>gi|325299684|ref|YP_004259601.1| Alpha-N-acetylgalactosaminidase [Bacteroides salanitronis DSM
           18170]
 gi|324319237|gb|ADY37128.1| Alpha-N-acetylgalactosaminidase [Bacteroides salanitronis DSM
           18170]
          Length = 516

 Score = 36.7 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 18/138 (13%), Positives = 37/138 (26%), Gaps = 9/138 (6%)

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYN-IIPQPHDCYNPIIWENDACFT 176
            I +                 +  +E+   +     +  +        + +I EN     
Sbjct: 141 YIAADWLHHFPIAKCALENGKNVAIEVPSAMNLKECWELVNLSEKMRKHCMILENCCYDW 200

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWD-YYADSWSKNKGIRIDH-------IML 228
            E+       Q +            H+L  FWD Y+        G R+D+       +  
Sbjct: 201 FEMNTLNMAQQGVFGEIIRAQGAYIHNLNEFWDHYWKKGEDDKLGWRLDYNMRHRGDVYA 260

Query: 229 SPEATSLLHSARIDTKPR 246
           +     +  +  I    R
Sbjct: 261 THGLGPVAQALNIHRGDR 278


>gi|118361195|ref|XP_001013828.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena
           thermophila]
 gi|89295595|gb|EAR93583.1| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena
           thermophila SB210]
          Length = 277

 Score = 36.7 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 37/266 (13%), Positives = 77/266 (28%), Gaps = 37/266 (13%)

Query: 4   VTVATWNV-----NSI-RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY-H 56
           +   ++NV     N + R+    L       +PD IC+QE  T+         + +   +
Sbjct: 36  LKFISYNVWFDQHNFVERSIE--LKKIFLNYDPDFICMQEV-TQPFLIQLAQDKEICQKY 92

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
             +    +   V ILSKY    I          +    +     IN + + IG  +L   
Sbjct: 93  YFSSPFVNQYDVFILSKYP---ISFKQMFFPSQMGRNLLFGEININNRKIVIGTTHLESL 149

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
               + + +      +    +       +  +    +   IP             D    
Sbjct: 150 KNNDNYRMEQLKIIKELLSSYDESIFMGDFNMSKLNEEQSIP---------ENYIDIWKA 200

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI-MLSPEATSL 235
           L   +    +Q      ++R         ++W                HI ++  +    
Sbjct: 201 LHPNEEGHTMQASKKFPSVRFDRVLLRQSTYWSPS-------------HIEIIGKDPIPY 247

Query: 236 LHSARIDTKPRGWTKPSDHTPVIVSL 261
             + +   +      PSDH  +   +
Sbjct: 248 YQNHQ-KKQIYEIVTPSDHYGLYAEI 272


>gi|322787161|gb|EFZ13351.1| hypothetical protein SINV_00529 [Solenopsis invicta]
          Length = 103

 Score = 36.7 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 11/39 (28%), Positives = 22/39 (56%), Gaps = 6/39 (15%)

Query: 2  SVVTVATWNVNSIRARIHNLAAWIKENN--PDIICLQET 38
          S + +  WN  S+R+++     +++      DI+C+QET
Sbjct: 20 SNLRMFQWNCQSLRSKLP----FLQAQAELFDILCIQET 54


>gi|322709123|gb|EFZ00699.1| Endonuclease/Exonuclease/phosphatase family protein [Metarhizium
           anisopliae ARSEF 23]
          Length = 320

 Score = 36.7 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 35/265 (13%), Positives = 74/265 (27%), Gaps = 23/265 (8%)

Query: 9   WNVNSIRARIHNLAAWIK-----ENNPDIICLQE-TKTEDKNFPFETLQSLNYHIETCGQ 62
           WNV     R   + + ++       +P  +CLQE   ++  +   E  +   +     G+
Sbjct: 67  WNV-----RCPKVCSQMRFITAGHESP-FVCLQESLSSQLNDIQAELGEP--WAHIGRGR 118

Query: 63  KSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT---QTLRIGNLYLPHGNPI 119
                    S              +    ++  E            +    L+    N  
Sbjct: 119 GEGEADGEFSPVFYRSDAWACEVSETRWLSKTPEKPSRGWDAALNRIVTIGLFSHRANGT 178

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                      I    R  S +L ++    ++    + P           E D      +
Sbjct: 179 KVVVMSTHFDHIGVEARKNSAKLLIKFANEWSHGKGVPPSVVLIGGDFNSETDDEAYRMM 238

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
                 + ++      R  +  H  Y+ +             RID + +    T+ + + 
Sbjct: 239 TAPGSGMSDISDLVPERRHYGNHLTYTSF-----GEPNEHPQRIDFLFIQEPRTAHVETF 293

Query: 240 RIDTKPRGWT-KPSDHTPVIVSLDI 263
            +         + SDH P++  L I
Sbjct: 294 GVLANSFDDQIRFSDHRPIVSDLQI 318


>gi|311895360|dbj|BAJ27768.1| hypothetical protein KSE_19440 [Kitasatospora setae KM-6054]
          Length = 809

 Score = 36.7 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 23/64 (35%), Gaps = 8/64 (12%)

Query: 200 DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR-IDTKPRGWTKPSDHTPVI 258
                YS+  Y  +S        +DHI++SP           +        + SDH P +
Sbjct: 752 PAEERYSYV-YQGNSQV------LDHILVSPALKPEKTHYDVVHINSEFAAQASDHDPQV 804

Query: 259 VSLD 262
           V + 
Sbjct: 805 VRIK 808


>gi|301164489|emb|CBW24047.1| putative exported phosphatase [Bacteroides fragilis 638R]
          Length = 312

 Score = 36.7 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 40/293 (13%), Positives = 79/293 (26%), Gaps = 37/293 (12%)

Query: 4   VTVATWNV-------N----SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52
           + V +WNV       N                ++++  D+I + ET             S
Sbjct: 29  LKVLSWNVWHAGHAKNYPEKG----CEGTIGILRKSQADVILMIET----YGAAPMVADS 80

Query: 53  LNYHIE------TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
           L Y             +       L               D+D     +  T+      +
Sbjct: 81  LGYDYVLLSDNLCIYSRYPIKKTYLFPDSISTFNFGGVEIDMDGTPVRLFDTWLHYLPDM 140

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEE--PLIFAGDYNI-IPQPHDC 163
           R+        + +       + + I+R L      +   +  P+I  GD+N+        
Sbjct: 141 RLVPTEQSETDILAWDDAGTRDNEIRRILSVLQPMIRQTDSIPMIMGGDFNVHSHLDWTE 200

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223
               ++ +             +      +          ++ + W Y  +        RI
Sbjct: 201 ATKDMYHHGGAVVEWTVSKEMQNAGFKDSFREIHPEPEKNIGTTWIYDNEDKPLRSD-RI 259

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTK--------PSDHTPVIVSLDIPEPRK 268
           D I    +    + S   + +     K        PSDH  V+ +  I    K
Sbjct: 260 DFIYYQGKTIRAITSESYNQELTKPLKFMGEEFFYPSDHGFVMTTFKISPLEK 312


>gi|300863989|ref|ZP_07108897.1| hypothetical protein OSCI_510002 [Oscillatoria sp. PCC 6506]
 gi|300338010|emb|CBN54043.1| hypothetical protein OSCI_510002 [Oscillatoria sp. PCC 6506]
          Length = 160

 Score = 36.7 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 17/41 (41%), Gaps = 7/41 (17%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           IDH +++          ++     G    SDH P+I  L I
Sbjct: 120 IDHCLIT-------KDIQVLNIRTGRKIGSDHLPLITDLAI 153


>gi|53715061|ref|YP_101053.1| hypothetical protein BF3777 [Bacteroides fragilis YCH46]
 gi|60683023|ref|YP_213167.1| putative exported phosphatase [Bacteroides fragilis NCTC 9343]
 gi|52217926|dbj|BAD50519.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
 gi|60494457|emb|CAH09253.1| putative exported phosphatase [Bacteroides fragilis NCTC 9343]
          Length = 312

 Score = 36.7 bits (83), Expect = 3.8,   Method: Composition-based stats.
 Identities = 40/293 (13%), Positives = 79/293 (26%), Gaps = 37/293 (12%)

Query: 4   VTVATWNV-------N----SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQS 52
           + V +WNV       N                ++++  D+I + ET             S
Sbjct: 29  LKVLSWNVWHAGHAKNYPEKG----CEGTIGILRKSQADVILMIET----YGAAPMVADS 80

Query: 53  LNYHIE------TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
           L Y             +       L               D+D     +  T+      +
Sbjct: 81  LGYDYVLLSDNLCIYSRYPIKKTYLFPDSISTFNFGGVEIDMDGTPVRLFDTWLHYLPDM 140

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEE--PLIFAGDYNI-IPQPHDC 163
           R+        + +       + + I+R L      +   +  P+I  GD+N+        
Sbjct: 141 RLVPTEQSETDILAWDDAGTRDNEIRRILSVLQPMIRQTDSIPMIMGGDFNVHSHLDWTD 200

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223
               ++ +             +      +          ++ + W Y  +        RI
Sbjct: 201 ATKDMYHHGGAVVEWTVSKEMQNAGFKDSFREIHPEPEKNIGTTWIYDNEDKPLRSD-RI 259

Query: 224 DHIMLSPEATSLLHSARIDTKPRGWTK--------PSDHTPVIVSLDIPEPRK 268
           D I    +    + S   + +     K        PSDH  V+ +  I    K
Sbjct: 260 DFIYYQGKTIRAITSESYNQELTKPLKFMGEEFFYPSDHGFVMTTFKISPLEK 312


>gi|225423450|ref|XP_002273870.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 989

 Score = 36.7 bits (83), Expect = 3.9,   Method: Composition-based stats.
 Identities = 18/137 (13%), Positives = 44/137 (32%), Gaps = 7/137 (5%)

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
           +    + +        +    EE     G +N        +N I+  +++     +    
Sbjct: 61  FIWTFTGVYGPTLRRKRESFWEELGTIKGFWNGPWCVAGDFNAIMRPDESSRGGSLNSIM 120

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
           ++   +     ++        +++              R+D  +++ E  S    AR   
Sbjct: 121 RRFAEVIEELELKDLPMVGGPFTW----TGGTDNQSFSRLDRFLVNEEWDSHFGDARQFL 176

Query: 244 KPRGWTKPSDHTPVIVS 260
            PR     SDH P+++ 
Sbjct: 177 LPRPM---SDHFPILMD 190


>gi|115920143|ref|XP_001179756.1| PREDICTED: similar to ORF2-encoded protein [Strongylocentrotus
          purpuratus]
 gi|115938174|ref|XP_001199327.1| PREDICTED: similar to ORF2-encoded protein [Strongylocentrotus
          purpuratus]
 gi|115951793|ref|XP_001179039.1| PREDICTED: similar to ORF2-encoded protein [Strongylocentrotus
          purpuratus]
 gi|115969372|ref|XP_001177206.1| PREDICTED: similar to ORF2-encoded protein [Strongylocentrotus
          purpuratus]
          Length = 982

 Score = 36.7 bits (83), Expect = 3.9,   Method: Composition-based stats.
 Identities = 14/36 (38%), Positives = 20/36 (55%)

Query: 9  WNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKN 44
          WN NS+R +   L   I +NN DI+ L ET    ++
Sbjct: 35 WNCNSVRNKTSLLFDHIIDNNVDIMFLTETWLRAED 70


>gi|12862428|dbj|BAB32464.1| Pol-like protein Pol-1 [Tricholoma matsutake]
          Length = 445

 Score = 36.7 bits (83), Expect = 3.9,   Method: Composition-based stats.
 Identities = 17/136 (12%), Positives = 31/136 (22%), Gaps = 19/136 (13%)

Query: 126 DKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQK 185
              S            + +       GD+N+     D               E       
Sbjct: 130 YSDSQHSAITLLFESVMTIPRLHFMCGDFNVRHASWD-----------PQGPEHSIHADH 178

Query: 186 LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKP 245
           L        +          + +              ID + +  +    +    I  + 
Sbjct: 179 LVETATALGLTRALPVVEGPTHFPPQQGLHPTV----IDLMFVPTDLR-FVLYCEIVPEA 233

Query: 246 RGWTKPSDHTPVIVSL 261
           RG    SDH P+ + L
Sbjct: 234 RGT---SDHAPLTLVL 246


>gi|115472309|ref|NP_001059753.1| Os07g0510300 [Oryza sativa Japonica Group]
 gi|34394650|dbj|BAC83957.1| unknown protein [Oryza sativa Japonica Group]
 gi|113611289|dbj|BAF21667.1| Os07g0510300 [Oryza sativa Japonica Group]
          Length = 261

 Score = 36.7 bits (83), Expect = 4.0,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 20/37 (54%), Gaps = 5/37 (13%)

Query: 7  ATWNVNS-----IRARIHNLAAWIKENNPDIICLQET 38
           T+NV S     +  R+  + + ++++ PD+I  QE 
Sbjct: 1  MTYNVWSREDVAVYKRMKAIGSLVEKHKPDVIFFQEI 37


>gi|326515450|dbj|BAK03638.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1193

 Score = 36.7 bits (83), Expect = 4.0,   Method: Composition-based stats.
 Identities = 11/36 (30%), Positives = 19/36 (52%), Gaps = 2/36 (5%)

Query: 6  VATWNVNSIR--ARIHNLAAWIKENNPDIICLQETK 39
          +  WNV  +   A+  +++     +   I+CLQETK
Sbjct: 8  IMCWNVCDLNNPAKRASVSEMAAAHRAAILCLQETK 43


>gi|224115140|ref|XP_002332211.1| predicted protein [Populus trichocarpa]
 gi|222874875|gb|EEF12006.1| predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 36.7 bits (83), Expect = 4.0,   Method: Composition-based stats.
 Identities = 35/261 (13%), Positives = 78/261 (29%), Gaps = 34/261 (13%)

Query: 4    VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
            + +  WN+  +   I +  L   I +    +  L ET+ +DKN                 
Sbjct: 806  MIIGCWNIRGLNDPIKHSELRRLIHQERIALFGLVETRVKDKN-----------KYNVTQ 854

Query: 62   QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
                +   + +          +  +   V+      +      ++ I    +     I  
Sbjct: 855  LLLRSWSFLYNYDFSCRGRIWVCWNADTVKVDVFGMSDQAIHVSVTILATNISFNTSIIY 914

Query: 122  TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
               +  +         +        P I  GD+N I    D              L+   
Sbjct: 915  GDNNASLREALWSDIVSRSDGWESTPWILMGDFNAIRNQSDRLGGSTTWAGTMDRLDTVI 974

Query: 182  SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR-IDHIMLSP--EATSLLHS 238
               K+ ++ ++            Y++    ++   +N  +R +D ++++        L  
Sbjct: 975  REAKVDDLRYSGMH---------YTW----SNQCPENLIMRKLDRVLVNEKWNLNFPLSE 1021

Query: 239  ARIDTKPRGWTKPSDHTPVIV 259
            AR           SDH+P++V
Sbjct: 1022 ARFLPSGM-----SDHSPMVV 1037


>gi|156539995|ref|XP_001599888.1| PREDICTED: similar to pol-like protein [Nasonia vitripennis]
          Length = 963

 Score = 36.7 bits (83), Expect = 4.0,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 2/42 (4%)

Query: 4  VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNF 45
          + +  WN  S+R + + L + +   N  + CLQET    ++ 
Sbjct: 7  LKILQWNCRSLRGKTYELESLLNNYN--VACLQETWLNSQDI 46


>gi|325179617|emb|CCA14015.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 394

 Score = 36.7 bits (83), Expect = 4.1,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 41/117 (35%), Gaps = 7/117 (5%)

Query: 3   VVTVATWNV--NSI--RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           ++ + T NV  +SI    R+  +   ++   P +I  QE  +E      +   S  Y   
Sbjct: 15  MLRILTLNVYFDSIALTLRMRAIGKCVERLRPGVIGFQEVTSESLAILKKQAWSRYYDCS 74

Query: 59  TCGQKSYNG---VAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
                  N    V + +    + I T+   +    +           TQTL +G  +
Sbjct: 75  ADCIAPSNNPYFVVLFTALPMLSIETYAFEETRMGRELICMHLRVSETQTLYVGTTH 131


>gi|322702385|gb|EFY94041.1| reverse transcriptase, putative [Metarhizium anisopliae ARSEF 23]
          Length = 1334

 Score = 36.7 bits (83), Expect = 4.1,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 18/46 (39%), Gaps = 4/46 (8%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268
           ID ++ + E    +    +     G    SDH  +  + D+  P +
Sbjct: 296 IDVVLATSELADEMVKCTLHPTDHG----SDHRAIQTTFDVAMPER 337


>gi|255727859|ref|XP_002548855.1| hypothetical protein CTRG_03152 [Candida tropicalis MYA-3404]
 gi|240133171|gb|EER32727.1| hypothetical protein CTRG_03152 [Candida tropicalis MYA-3404]
          Length = 815

 Score = 36.7 bits (83), Expect = 4.1,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 29/81 (35%), Gaps = 16/81 (19%)

Query: 208 WDYYADSWSKNKGIRIDHIMLS-PEATSLLHSARIDTKPRG-------WTKPSDHTPVIV 259
           +      ++ N    ID+I  S P         ++D +             PSDH P++ 
Sbjct: 733 FTNMTPGFTDN----IDYIWYSTPTLQVKGLLGKVDEEYTSHCIGFPDANFPSDHVPILA 788

Query: 260 SLDIPEPRKKQQDSTSQNMKP 280
              +    KK  ++   + KP
Sbjct: 789 RFQV----KKGSNAKKPDFKP 805


>gi|255071691|ref|XP_002499520.1| predicted protein [Micromonas sp. RCC299]
 gi|226514782|gb|ACO60778.1| predicted protein [Micromonas sp. RCC299]
          Length = 414

 Score = 36.7 bits (83), Expect = 4.1,   Method: Composition-based stats.
 Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 16/49 (32%)

Query: 6   VATWNVN-----------SIR---ARIHNLAAWIKENNP--DIICLQET 38
           + TWNV            S+R   AR   +A  I E  P  D++ LQE 
Sbjct: 80  IVTWNVQMLPGVLPGCAGSVRHLVARAEQIAERILELEPWPDVVVLQEV 128


>gi|45478186|gb|AAS66264.1| LRRGT00173 [Rattus norvegicus]
          Length = 931

 Score = 36.7 bits (83), Expect = 4.1,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 60/219 (27%), Gaps = 30/219 (13%)

Query: 36  QETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFI 95
           QET   DK+  +  ++      +  GQK   GVAIL   +                 +  
Sbjct: 283 QETHLRDKDRHYLRVKGWKTTFQANGQKKQAGVAILISNKINF--------------QLK 328

Query: 96  EATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYN 155
                     + I          I +    +  +           +  +    I  GD+N
Sbjct: 329 VIKKDKKGHFIFIKGKIHQDELSILNIYAPNTRAPTYVKETLLKLKTHIAPHTIIVGDFN 388

Query: 156 IIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSW 215
                 D        +D     EV            TD  R  +     Y+F+     ++
Sbjct: 389 TPLSSMDRSGKQKLNSDVDRLREVMSQM------DLTDIYRTFYPKAKGYTFFSAPHGTF 442

Query: 216 SKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDH 254
           SK     IDHI+      +      I          SDH
Sbjct: 443 SK-----IDHIIGQKTGLNRYRKIEIIPCVL-----SDH 471


>gi|290981586|ref|XP_002673511.1| predicted protein [Naegleria gruberi]
 gi|284087095|gb|EFC40767.1| predicted protein [Naegleria gruberi]
          Length = 292

 Score = 36.7 bits (83), Expect = 4.1,   Method: Composition-based stats.
 Identities = 22/116 (18%), Positives = 39/116 (33%), Gaps = 14/116 (12%)

Query: 1   MSVVTVATWNVNS-IRARIHNLAAWI---KENNPDIICLQE-TKTEDKNFPFETLQSLNY 55
           ++   V T+NV   ++ R   +   I   K+ N DI+CLQE TK        E + +L+Y
Sbjct: 174 LTSFKVLTFNVWFDLQDREDRMIKIIDICKDCNADIVCLQEMTKGT-----LEIMTNLSY 228

Query: 56  ----HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLR 107
                  +   +  N   +  +Y   + V     +                     
Sbjct: 229 VRENFYISDSVEFGNRTVMPYEYANDKNVYEQTSNKHVSVGNECRIECEWRVGVFY 284


>gi|152974643|ref|YP_001374160.1| endonuclease/exonuclease/phosphatase [Bacillus cereus subsp.
           cytotoxis NVH 391-98]
 gi|152023395|gb|ABS21165.1| Endonuclease/exonuclease/phosphatase [Bacillus cytotoxicus NVH
           391-98]
          Length = 790

 Score = 36.7 bits (83), Expect = 4.1,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 21/48 (43%), Gaps = 3/48 (6%)

Query: 223 IDHIMLSPEATSL-LHSARIDTKPRGWT--KPSDHTPVIVSLDIPEPR 267
           +DHI+++    +  +               + SDH PV+  +D+ + R
Sbjct: 741 LDHILVTNNIANHTIVDPVHLNTNMMKEHGRVSDHDPVLAQIDLKKAR 788


>gi|242066048|ref|XP_002454313.1| hypothetical protein SORBIDRAFT_04g028482 [Sorghum bicolor]
 gi|241934144|gb|EES07289.1| hypothetical protein SORBIDRAFT_04g028482 [Sorghum bicolor]
          Length = 509

 Score = 36.7 bits (83), Expect = 4.2,   Method: Composition-based stats.
 Identities = 28/241 (11%), Positives = 60/241 (24%), Gaps = 29/241 (12%)

Query: 25  IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLP 84
           +++  P +I + ET           +++L Y +      + N                  
Sbjct: 220 LRDYAPAVIFIMET-----QINKYRVENLRYSLGYDDSFAVNSSGKSGGLGLFWKNDVNV 274

Query: 85  GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL 144
                 +            +  R+  +Y      +    +D        F          
Sbjct: 275 SIKKFSKYHIDTIIEENGKEPWRMSFIYGEPNRSLRHRTWDIMKQMRSDFDLPWLCI--G 332

Query: 145 EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL 204
           +   I   D  + P   + Y    +             +  L                  
Sbjct: 333 DFNEILRRDEQLGPNIREDYLMEGFREAVDVCQLCDIGYMGLDWTFEKKVA--------- 383

Query: 205 YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
                     + +   +R+D  + S   +S    A +          SDH P+++SL + 
Sbjct: 384 -------GGHFVR---VRLDRALASASWSSYFPFA-VLRHLTAVK--SDHCPILLSLQLD 430

Query: 265 E 265
           E
Sbjct: 431 E 431


>gi|147775294|emb|CAN61586.1| hypothetical protein VITISV_042821 [Vitis vinifera]
          Length = 1302

 Score = 36.7 bits (83), Expect = 4.2,   Method: Composition-based stats.
 Identities = 7/59 (11%), Positives = 22/59 (37%), Gaps = 7/59 (11%)

Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
               +++    +   +     R+D  +++ +   +        + R     SDH P+++
Sbjct: 465 QEGAFTW----SGGRNNQSWARLDRFLVTQQWLEMFSGIA---QCRLQRPTSDHFPILL 516


>gi|255637077|gb|ACU18870.1| unknown [Glycine max]
          Length = 393

 Score = 36.7 bits (83), Expect = 4.2,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 19/40 (47%), Gaps = 7/40 (17%)

Query: 5   TVATWNVNSIR------ARIHNLAAWIKENNPDIICLQET 38
            + ++NV   R       R+  +   ++ ++PD IC QE 
Sbjct: 136 KILSYNVW-FREDLELHKRMKAIGDLVQFHSPDFICFQEV 174


>gi|171910435|ref|ZP_02925905.1| hypothetical protein VspiD_04665 [Verrucomicrobium spinosum DSM
           4136]
          Length = 280

 Score = 36.7 bits (83), Expect = 4.2,   Method: Composition-based stats.
 Identities = 39/275 (14%), Positives = 76/275 (27%), Gaps = 39/275 (14%)

Query: 3   VVTVATWNV-----------NSIRARIHNLAAWIK---ENNPDIICLQETKTED--KNFP 46
           VV + TWN+              + R  +         +   D++ LQE + +D  +   
Sbjct: 15  VVRLVTWNLEWFPGRKPTATQGKKDR--HFLEVAAVIPQFRADVMVLQEVRDQDSAEKL- 71

Query: 47  FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
            + +     H+ +  +    G   L +   +             +  +  A        L
Sbjct: 72  AKLMPGFQVHVVSRFKDEVGGAVGLQQIAIMSRFPADGAWAESWKRGWANAPRGYVYAKL 131

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
            +    L        +   D I    +      Q L   +    AG+  ++    +    
Sbjct: 132 IVEGRPLHVYGLHLKSNLGDPIKNTSKREDAVEQLLGHIKDQCKAGEPVVVTGDFNTSKE 191

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI 226
            +        L++ +        G     R T      Y         +        DH+
Sbjct: 192 QLNLAGDRTLLKLEEQGFFWAFEGVPLKDRITIPGGGRY-----PDACF--------DHV 238

Query: 227 MLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
             + +    +  A +     G    SDH PV V L
Sbjct: 239 Y-TRDLGRPV--AAVLKDTPG----SDHFPVAVDL 266


>gi|32472396|ref|NP_865390.1| hypothetical protein RB3242 [Rhodopirellula baltica SH 1]
 gi|32443632|emb|CAD73074.1| hypothetical protein-transmembrane prediction [Rhodopirellula
           baltica SH 1]
          Length = 439

 Score = 36.7 bits (83), Expect = 4.2,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 29/57 (50%), Gaps = 6/57 (10%)

Query: 215 WSKNKGIRIDHIMLSPEATSLLHSARIDTKPR----GWTKPSDHTPVIVSLDIPEPR 267
           + +N+ IR+D+++ S     ++ SA +    +       + +DH  + + ++ P PR
Sbjct: 385 FGRNE-IRVDYVLPSSNL-HVIRSAVVWPDAQTDLGKRVRATDHRMIWIDIERPSPR 439


>gi|242047566|ref|XP_002461529.1| hypothetical protein SORBIDRAFT_02g004230 [Sorghum bicolor]
 gi|241924906|gb|EER98050.1| hypothetical protein SORBIDRAFT_02g004230 [Sorghum bicolor]
          Length = 569

 Score = 36.7 bits (83), Expect = 4.2,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 35/113 (30%), Gaps = 16/113 (14%)

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWD--YYADSWSKNKGIRID 224
           +          ++R   +  +        R      + YSF    Y  +     +  R  
Sbjct: 436 MHNWKQLLEKDQLRMQQRYGRVFQGWREGRIYFPPTYKYSFNSDRYAGEGRHPKEKRR-- 493

Query: 225 HIMLSPEATSLLHSAR----IDTKPRGWTKPSDHTPV----IVSLDIPEPRKK 269
               +P     +          +  RG ++ SDH PV    +  +DI   R++
Sbjct: 494 ----TPAWCDRILWYGNGLNQLSYVRGESRFSDHRPVYSIFLAEVDIVHQRRR 542


>gi|158338869|ref|YP_001520046.1| hypothetical protein AM1_5782 [Acaryochloris marina MBIC11017]
 gi|158309110|gb|ABW30727.1| conserved hypothetical protein [Acaryochloris marina MBIC11017]
          Length = 290

 Score = 36.7 bits (83), Expect = 4.2,   Method: Composition-based stats.
 Identities = 43/264 (16%), Positives = 73/264 (27%), Gaps = 51/264 (19%)

Query: 4   VTVATWNVNSIRARIHN-----LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIE 58
           + V  +N+      I N     +A  I+  +PDI+ L E     K    E    L+Y   
Sbjct: 71  MRVMAYNI-----WIDNPNTDAIAQSIQGEDPDILFLSEV---SKPMMAELQSRLSY--P 120

Query: 59  TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNP 118
              +   +  A+ S+Y  +E  T+  G     +   + A   +    + I  ++ P    
Sbjct: 121 HDYRTEGSNNALFSRYPILEATTNDFGVTTKGRTFSLVAKLQVEGNPVTIIGIHPPVPII 180

Query: 119 ITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLE 178
                  ++          +     +E  LI  GD+N  P                    
Sbjct: 181 PGFFHIRNRQLDTFAKASQS-----IEGKLIVLGDFNATPWSPYFQRFERISQLQNSGHR 235

Query: 179 VRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHS 238
                    N   T                              +DHI            
Sbjct: 236 QWIWATWYFNQTLTTRYIKIP-----------------------LDHI--------ETRG 264

Query: 239 ARIDTKPRGWTKPSDHTPVIVSLD 262
             +     G T  SDH P++  L+
Sbjct: 265 FTVLKTWTGQTGGSDHKPIVTVLE 288


>gi|147828499|emb|CAN77578.1| hypothetical protein VITISV_015344 [Vitis vinifera]
          Length = 1102

 Score = 36.7 bits (83), Expect = 4.2,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 17/45 (37%), Gaps = 4/45 (8%)

Query: 216 SKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
             N+   R+D  ++S               PR     SDH P+++
Sbjct: 564 QNNQTWARLDRFLVSLSWIDQFSGINQCRLPRSI---SDHFPIML 605


>gi|304395763|ref|ZP_07377646.1| Endonuclease/exonuclease/phosphatase [Pantoea sp. aB]
 gi|304357057|gb|EFM21421.1| Endonuclease/exonuclease/phosphatase [Pantoea sp. aB]
          Length = 253

 Score = 36.3 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 31/260 (11%), Positives = 54/260 (20%), Gaps = 44/260 (16%)

Query: 15  RARIHNLAAWIKENNPDIICLQE---TKTEDKNFPFETLQSLNYHIETCGQKSYNGVAIL 71
           R  +  L   ++    D++ LQE   T             S +Y  E      +N  A  
Sbjct: 27  RFILPELRDAVRATEADVVFLQEVMGTHAIHALNHEAWPDSPHY--EFLADTIWNDFAYG 84

Query: 72  SKYQPIEIVTHLPGDDLDVQARFIEATFTINTQ----TLRIGNLYLPHGNPITSTKYDDK 127
                 E               +     ++        L            +        
Sbjct: 85  RNAVYPEGHHGNAVLSRFPITEYENRDISVAGSENRGMLHCQIALPEPHGTLHVICVHLG 144

Query: 128 ISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQ 187
           +    R  +       +      A                          EV        
Sbjct: 145 LKEAHRHAQMKKICEMVNSLPPDAPVVVAGDFNDWQRRANSILKQGAGLKEVFSMKTGRP 204

Query: 188 NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTK--- 244
              F                             +R+D I +         +A +      
Sbjct: 205 ARTFPARFPI-----------------------LRLDRIYV--------RNATVSHPWAL 233

Query: 245 PRG-WTKPSDHTPVIVSLDI 263
           PR  W+  SDH P+ V + +
Sbjct: 234 PRKPWSHLSDHAPLAVEIHL 253


>gi|171682868|ref|XP_001906377.1| hypothetical protein [Podospora anserina S mat+]
 gi|170941393|emb|CAP67043.1| unnamed protein product [Podospora anserina S mat+]
          Length = 619

 Score = 36.3 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 26/70 (37%), Gaps = 13/70 (18%)

Query: 199 HDTHHLYSF-WDYYADSWSKNKGIRIDHIMLSPEATSLLHS----ARIDTKPRGWTKPSD 253
                 Y++ +D  A +        +DH+ +SP   +   S      ++T        SD
Sbjct: 556 IKPTERYTYAFDMNAQA--------LDHMYVSPSLAASSKSDFEHIHVNTWGSYAEMVSD 607

Query: 254 HTPVIVSLDI 263
           H P +   D+
Sbjct: 608 HDPSVALFDL 617


>gi|77166097|ref|YP_344622.1| endonuclease/exonuclease/phosphatase [Nitrosococcus oceani ATCC
           19707]
 gi|254435463|ref|ZP_05048970.1| endonuclease/exonuclease/phosphatase family [Nitrosococcus oceani
           AFC27]
 gi|76884411|gb|ABA59092.1| Endonuclease/exonuclease/phosphatase [Nitrosococcus oceani ATCC
           19707]
 gi|207088574|gb|EDZ65846.1| endonuclease/exonuclease/phosphatase family [Nitrosococcus oceani
           AFC27]
          Length = 288

 Score = 36.3 bits (82), Expect = 4.3,   Method: Composition-based stats.
 Identities = 12/66 (18%), Positives = 21/66 (31%), Gaps = 14/66 (21%)

Query: 200 DTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
               + ++  +            IDHI++SP          I          SDH P+  
Sbjct: 210 PVTKIATYPSWRPK-------RHIDHILVSPSLE------VIQVGALAHAV-SDHLPLAT 255

Query: 260 SLDIPE 265
            + +P 
Sbjct: 256 EILVPA 261


>gi|290976752|ref|XP_002671103.1| predicted protein [Naegleria gruberi]
 gi|284084669|gb|EFC38359.1| predicted protein [Naegleria gruberi]
          Length = 358

 Score = 36.3 bits (82), Expect = 4.4,   Method: Composition-based stats.
 Identities = 42/334 (12%), Positives = 83/334 (24%), Gaps = 73/334 (21%)

Query: 2   SVVTVATWN--------VNSIRARIHNLAAWIKENNPDIICLQETKTEDKN--FPFETLQ 51
           + + +A++N        VN     +  +   I + + D++ LQE   +  +     E   
Sbjct: 30  NNLKIASFNTALVPGTPVN-----VKKIIETIPK-DLDVVFLQEVWLQSHSHLIAEELKS 83

Query: 52  SLNYHIE---------------TCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIE 96
           S  Y                             +      +   T  P  +   +A +  
Sbjct: 84  SYPYSFHGHKEVLNEASCTDDSFHRFALPFLHCVRENNLTLSWTTLGPCAEFLSRAAYGN 143

Query: 97  ATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIK------------------------ 132
                   T  + N  + +      T  +                               
Sbjct: 144 FKCISCVLTSIVENKNMANCYTPGHTGQEFLYDGSNGLMVLSKTPISRANYTSYPSFLLS 203

Query: 133 ----RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN 188
                        +E   P  F  D  ++ QP      I+   +            + + 
Sbjct: 204 RGLLEMCINGLYIMESHFPFNFGIDLPVMYQPEFSRMVIMKRPNILVGDLNSGPMTQPEG 263

Query: 189 MGFTDAIRATHDTHHLYSF------WDYY--ADSWSKNKGIRIDHIML---SPEATSLLH 237
                         +  +F      W+    +D   +N G+  DHIM+   S       +
Sbjct: 264 YETLAGYGYQSIDPNKATFCVNGLNWESGDCSDDPERNTGM--DHIMVDKFSRILEWNFN 321

Query: 238 SARIDT-KPRGWTKPSDHTPVIVSLDIPEPRKKQ 270
           ++            PSDH  +   L+    RK  
Sbjct: 322 NSFKLQLFGDSTPTPSDHLGITTELNYNMARKHP 355


>gi|254520361|ref|ZP_05132417.1| endonuclease/exonuclease/phosphatase [Clostridium sp. 7_2_43FAA]
 gi|226914110|gb|EEH99311.1| endonuclease/exonuclease/phosphatase [Clostridium sp. 7_2_43FAA]
          Length = 263

 Score = 36.3 bits (82), Expect = 4.4,   Method: Composition-based stats.
 Identities = 33/282 (11%), Positives = 66/282 (23%), Gaps = 43/282 (15%)

Query: 4   VTVATWNVNSI-----RARIHNLAAWIKENNPDIICLQET-----KT------EDKNF-- 45
           + + T N +S        +I  LA  I E   D+I  QE      K+      ++ NF  
Sbjct: 1   MKLLTLNCHSWMEENQLEKIKYLAEIINEKQYDVISFQEVSQSIEKSVVSGDIKEDNFIY 60

Query: 46  ----PFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTI 101
                 E L   NY            +                      ++       + 
Sbjct: 61  LLNKELEKLGEFNYKYVWDFSHIGYDIYEEGLSILTRHEIEDVELFYITKSSEKTFYKSR 120

Query: 102 NTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH 161
                 I               + D      ++              +     N     +
Sbjct: 121 KIIKATITIDNKKINFFTCHLGWWDDEEESFKYQVDNLMTKVNGISFVMGDINNNALIRN 180

Query: 162 DCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI 221
           + Y+ ++ +          +    +   G         +                     
Sbjct: 181 EGYDYLLSKGLIDTYDIALEKDNGITVQGEIAGWEGKTENK------------------- 221

Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           R+D I  + +    +  + +       +  SDH  V   +DI
Sbjct: 222 RLDIIFTNTDV--NVKKSNVIFNDINKSIISDHYGVEADIDI 261


>gi|89074807|ref|ZP_01161261.1| putative exported phosphatase [Photobacterium sp. SKA34]
 gi|89049382|gb|EAR54944.1| putative exported phosphatase [Photobacterium sp. SKA34]
          Length = 342

 Score = 36.3 bits (82), Expect = 4.4,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 26/76 (34%), Gaps = 7/76 (9%)

Query: 191 FTDAIRATHDTHHLYSF--WDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRG- 247
           F DA R  H     ++   W       + N   RID+I         L S  ID+   G 
Sbjct: 268 FKDAFREMHPNVLTHTGKSWSPQGGDIAPN---RIDYIYYKGSKLQALESVTIDSIAAGT 324

Query: 248 -WTKPSDHTPVIVSLD 262
                SDH+ V     
Sbjct: 325 TNDTTSDHSAVFARFK 340


>gi|317156327|ref|XP_001825633.2| reverse transcriptase [Aspergillus oryzae RIB40]
          Length = 1393

 Score = 36.3 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 31/270 (11%), Positives = 64/270 (23%), Gaps = 35/270 (12%)

Query: 13  SIRARIH-NLAAWIKE---NNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGV 68
            I AR+   + A I +    N DI+ +QE            L + + H+           
Sbjct: 113 GI-ARLGAGMEALINDSQTQNLDILLIQE----------PPLTAYSTHVNH-----SAWH 156

Query: 69  AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKI 128
              S  Q                +         N   +    ++      +  + Y    
Sbjct: 157 LYQSTCQEDTPKKRSLLYVNRRISTASHRQIKCNHPDVTAVKMWTMERQMLIFSIYVPTT 216

Query: 129 SWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQN 188
           +  +     + Q +  E             +P        +        + R     +++
Sbjct: 217 NHSQPMEEVSIQAMLEEIETCIQQAIETTDKPTTIIMAGDFNRHHPMWSKNRIYHVAIEH 276

Query: 189 MGFTDAIRATHD-----THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDT 243
                     H           ++W       +      ID  +        L    +  
Sbjct: 277 AEELVTFFHKHGLQPCLPRGTPTYWSMSYPGSNST----IDLTVTDTP--ESLIKCHLYH 330

Query: 244 KPRGWTKPSDHTPVIVSLDIPEPRKKQQDS 273
              G    SDH  V     +   R  +++ 
Sbjct: 331 DHYG----SDHRAVYSEWSLDPSRNAEREP 356


>gi|270295774|ref|ZP_06201974.1| glycosyl hydrolase family 109 protein [Bacteroides sp. D20]
 gi|270273178|gb|EFA19040.1| glycosyl hydrolase family 109 protein [Bacteroides sp. D20]
          Length = 512

 Score = 36.3 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 30/104 (28%), Gaps = 9/104 (8%)

Query: 151 AGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWD- 209
             D  I        +  I EN      E+         +            H+L  FWD 
Sbjct: 175 CWDL-INLSESTRKHCFILENCCYDWFEMNTLNMAQHGVFGEVIRAQGAYIHNLSPFWDH 233

Query: 210 YYADSWSKNKGIRIDH-------IMLSPEATSLLHSARIDTKPR 246
           Y+ +  +   G R+D+       +  +     +  +  I    R
Sbjct: 234 YWKNGENDKLGWRLDYNMKHRGDVYATHGLGPVAQALDIHRGDR 277


>gi|254562926|ref|YP_003070021.1| hypothetical protein METDI4575 [Methylobacterium extorquens DM4]
 gi|254270204|emb|CAX26198.1| conserved hypothetical protein; putative membrane protein
           [Methylobacterium extorquens DM4]
          Length = 348

 Score = 36.3 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 15/41 (36%), Gaps = 7/41 (17%)

Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
             +DHI  S      L   +     R     SDH P+ V L
Sbjct: 284 WPLDHIFFSEHFL--LSDMQ-----RLNDVGSDHFPIWVDL 317


>gi|240140331|ref|YP_002964810.1| hypothetical protein MexAM1_META1p3842 [Methylobacterium extorquens
           AM1]
 gi|240010307|gb|ACS41533.1| conserved hypothetical protein; putative membrane protein
           [Methylobacterium extorquens AM1]
          Length = 348

 Score = 36.3 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 15/41 (36%), Gaps = 7/41 (17%)

Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
             +DHI  S      L   +     R     SDH P+ V L
Sbjct: 284 WPLDHIFFSEHFL--LSDMQ-----RLNDVGSDHFPIWVDL 317


>gi|218531799|ref|YP_002422615.1| endonuclease/exonuclease/phosphatase [Methylobacterium
           chloromethanicum CM4]
 gi|218524102|gb|ACK84687.1| Endonuclease/exonuclease/phosphatase [Methylobacterium
           chloromethanicum CM4]
          Length = 353

 Score = 36.3 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 15/41 (36%), Gaps = 7/41 (17%)

Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
             +DHI  S      L   +     R     SDH P+ V L
Sbjct: 289 WPLDHIFFSEHFL--LSDMQ-----RLNDVGSDHFPIWVDL 322


>gi|163852991|ref|YP_001641034.1| endonuclease/exonuclease/phosphatase [Methylobacterium extorquens
           PA1]
 gi|163664596|gb|ABY31963.1| Endonuclease/exonuclease/phosphatase [Methylobacterium extorquens
           PA1]
          Length = 353

 Score = 36.3 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 15/41 (36%), Gaps = 7/41 (17%)

Query: 221 IRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
             +DHI  S      L   +     R     SDH P+ V L
Sbjct: 289 WPLDHIFFSEHFL--LSDMQ-----RLNDVGSDHFPIWVDL 322


>gi|147854675|emb|CAN80245.1| hypothetical protein VITISV_031023 [Vitis vinifera]
          Length = 1636

 Score = 36.3 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 19/143 (13%), Positives = 48/143 (33%), Gaps = 11/143 (7%)

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                    + +   +    + +  EE     G ++        +N I +  +     E+
Sbjct: 748 CMDGMRWVFTGVYGPVCRRDREVFWEELGSIKGLWSDPWCVGGDFNMIRYPEERRRGGEL 807

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
             S ++   +     +R       L+++        +     R+D  +++ E   + + A
Sbjct: 808 SASMRRFTEVVEDLELRDYPLQGGLFTW----RGGLNNQSQSRLDRFLVTDEWDRMFNGA 863

Query: 240 --RIDTKPRGWTKPSDHTPVIVS 260
              I  +P      SDH P+++ 
Sbjct: 864 KQGILARP-----VSDHFPILLE 881


>gi|126272963|ref|XP_001371745.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 729

 Score = 36.3 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 40/287 (13%), Positives = 85/287 (29%), Gaps = 44/287 (15%)

Query: 8   TWNVNSIRARIHNLAAWI--KENNPDIICL--QETKTEDKNF-------PFETL----QS 52
           TWNVN  ++    L  W+    + PDI CL  QE     + F         E L    ++
Sbjct: 89  TWNVNG-QSPDSGLEPWLNCDRDPPDIYCLGFQELDLSIEAFFYFESTKEHEWLASVKRA 147

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
           L++  +    +    V ++      +       D +             N   + +  ++
Sbjct: 148 LHFKSKYNKVQLVRLVGMMLLIFARKEHCMYIQDVVTDTVGTGLMGKMGNKGAVAVRFMF 207

Query: 113 LPHGNPITSTKYDDKISWIK-RFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN 171
                 I ++    ++  ++ R   +      +   +   G  NI+      +   +   
Sbjct: 208 HNTTFCIVNSHLAAQMEDVEGRNQDYKDICARMSFLVPNQGHLNIMKHDVVIWLGDLNYR 267

Query: 172 DACFTLEVRQSFQKLQNMGF-------------TDAIRATHDTHHLY--SF-WDYYADSW 215
              ++ +  +      ++                 A     +    +  ++ +D   D W
Sbjct: 268 IYIYSAKEVKWLISRNDLHKLLKLDQLNIQRSDKKAFTDFTEGEIRFIPTYKFDTKTDRW 327

Query: 216 SKNKGIRIDHIMLSPEATSLL--HSARID---TKPRGWTKPSDHTPV 257
             +   RI      P     +      I     +     K SDH PV
Sbjct: 328 DSSGKCRI------PAWCDRILWKGENIQQLRYQSHMGLKTSDHKPV 368


>gi|160890679|ref|ZP_02071682.1| hypothetical protein BACUNI_03124 [Bacteroides uniformis ATCC 8492]
 gi|317479793|ref|ZP_07938913.1| oxidoreductase family protein [Bacteroides sp. 4_1_36]
 gi|156859678|gb|EDO53109.1| hypothetical protein BACUNI_03124 [Bacteroides uniformis ATCC 8492]
 gi|316903999|gb|EFV25833.1| oxidoreductase family protein [Bacteroides sp. 4_1_36]
          Length = 512

 Score = 36.3 bits (82), Expect = 4.5,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 30/104 (28%), Gaps = 9/104 (8%)

Query: 151 AGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWD- 209
             D  I        +  I EN      E+         +            H+L  FWD 
Sbjct: 175 CWDL-INLSESTRKHCFILENCCYDWFEMNTLNMAQHGVFGEVIRAQGAYIHNLSPFWDH 233

Query: 210 YYADSWSKNKGIRIDH-------IMLSPEATSLLHSARIDTKPR 246
           Y+ +  +   G R+D+       +  +     +  +  I    R
Sbjct: 234 YWKNGENDKLGWRLDYNMKHRGDVYATHGLGPVAQALDIHRGDR 277


>gi|281340144|gb|EFB15728.1| hypothetical protein PANDA_008703 [Ailuropoda melanoleuca]
          Length = 95

 Score = 36.3 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 23/77 (29%), Gaps = 11/77 (14%)

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLH 237
           E        + M  TD  R  H     Y+F+     ++       IDHI+      +   
Sbjct: 20  ETMALNDTQELMNLTDIFRKFHP-KTEYTFFSSAHGTFYS-----IDHILAHKTILNKFK 73

Query: 238 SARIDTKPRGWTKPSDH 254
              +          SDH
Sbjct: 74  KIEVIPCI-----FSDH 85


>gi|260788622|ref|XP_002589348.1| hypothetical protein BRAFLDRAFT_77801 [Branchiostoma floridae]
 gi|229274525|gb|EEN45359.1| hypothetical protein BRAFLDRAFT_77801 [Branchiostoma floridae]
          Length = 392

 Score = 36.3 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 19/144 (13%), Positives = 33/144 (22%), Gaps = 18/144 (12%)

Query: 134 FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTD 193
              F     +  +  I AGD N  P                              M    
Sbjct: 153 HHYFYRHMSQSADVNILAGDLNNQPFELGLKIIQSNTGMEDAWPSAEHKNADDSGMTCWC 212

Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM--LSPEATSLLHSAR--IDTKPRGWT 249
           +    +                     +RID++    S             +   P    
Sbjct: 213 SENNYNSGCPE--------------APMRIDYVFYKGSARCRVKCVHCETTMHKVPGKPF 258

Query: 250 KPSDHTPVIVSLDIPEPRKKQQDS 273
             SDH  V+  L++ +  +   D+
Sbjct: 259 NYSDHEGVLAHLELEKVSEPSDDN 282


>gi|156347587|ref|XP_001621682.1| hypothetical protein NEMVEDRAFT_v1g144035 [Nematostella vectensis]
 gi|156207863|gb|EDO29582.1| predicted protein [Nematostella vectensis]
          Length = 287

 Score = 36.3 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 15/166 (9%), Positives = 37/166 (22%)

Query: 47  FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
               ++  Y +       Y      + Y  + +           +A +            
Sbjct: 39  LHMYRAHYYRLHMYRAHYYRLHMYRAHYYTLHMYRAHYYRLHMYRAHYYRLHMYRAHYYR 98

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
                   +   +    Y     +   + R    R       ++   Y  +      Y  
Sbjct: 99  LHMYRAHYYRLHMYCAHYYRLHMYRAHYYRLHMYRAHYYRLHMYRAHYYRLHMYRAHYYR 158

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYA 212
           +       + L + ++     +M             H Y+   Y A
Sbjct: 159 LHMCRAHYYRLHMYRAHYYRLHMYRAHYYTLHMYRAHYYTLHMYRA 204



 Score = 36.3 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 16/166 (9%), Positives = 38/166 (22%)

Query: 47  FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
               ++  Y +       Y      + Y  + +           +A +            
Sbjct: 29  LHMYRAHYYRLHMYRAHYYRLHMYRAHYYRLHMYRAHYYTLHMYRAHYYRLHMYRAHYYR 88

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
                   +   +    Y     +   + R    R       ++   Y  +      Y  
Sbjct: 89  LHMYRAHYYRLHMYRAHYYRLHMYCAHYYRLHMYRAHYYRLHMYRAHYYRLHMYRAHYYR 148

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYA 212
           +       + L + ++     +M      R      H Y+   Y A
Sbjct: 149 LHMYRAHYYRLHMCRAHYYRLHMYRAHYYRLHMYRAHYYTLHMYRA 194



 Score = 36.3 bits (82), Expect = 5.5,   Method: Composition-based stats.
 Identities = 14/161 (8%), Positives = 36/161 (22%), Gaps = 1/161 (0%)

Query: 53  LNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
            +Y+     +  Y  + +   +     +       L +                R+    
Sbjct: 64  AHYYTLHMYRAHYYRLHMYRAHYYRLHMYRAHYYRLHMYRAHYYRLHMYCAHYYRLHMYR 123

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNII-PQPHDCYNPIIWEN 171
             +        +  ++   +               L     +          Y  +    
Sbjct: 124 AHYYRLHMYRAHYYRLHMYRAHYYRLHMYRAHYYRLHMCRAHYYRLHMYRAHYYRLHMYR 183

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYA 212
              +TL + ++     +M      R      H Y+   Y A
Sbjct: 184 AHYYTLHMYRAHYYTLHMYRAHYYRLHMYRAHYYTLHMYRA 224



 Score = 35.9 bits (81), Expect = 6.1,   Method: Composition-based stats.
 Identities = 15/166 (9%), Positives = 36/166 (21%)

Query: 47  FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
               ++  Y +       Y      + Y  + +           +A +            
Sbjct: 79  LHMYRAHYYRLHMYRAHYYRLHMYRAHYYRLHMYCAHYYRLHMYRAHYYRLHMYRAHYYR 138

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
                   +   +    Y         + R    R       ++   Y  +      Y  
Sbjct: 139 LHMYRAHYYRLHMYRAHYYRLHMCRAHYYRLHMYRAHYYRLHMYRAHYYTLHMYRAHYYT 198

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYA 212
           +       + L + ++     +M             H Y+   Y A
Sbjct: 199 LHMYRAHYYRLHMYRAHYYTLHMYRAHYYTLHMYGAHYYTLHMYRA 244


>gi|298713638|emb|CBJ33686.1| n/a [Ectocarpus siliculosus]
          Length = 1023

 Score = 36.3 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 9/163 (5%), Positives = 22/163 (13%), Gaps = 6/163 (3%)

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPI-EIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
               ++           +    +           G  +             N     +  
Sbjct: 735 YAGPYVCWWHYTGPYRRSWWRPWYADPYDDRRNAGPYVCWWYYAGPYVCRWNYAGPYVCR 794

Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPH---DCYNPI 167
                              W                   +      +   H         
Sbjct: 795 WNYADPYDDRRNAGPYVCWWYYAGPYVCRWYYAGPYVCRWYYAGPYVCWWHYTGPYRRSW 854

Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY--SFW 208
                A    + R +   +    +             Y  S+W
Sbjct: 855 WRPWYADPYDDRRDAGPYVCRWYYAGPYVCWWHYTGPYRRSWW 897



 Score = 36.3 bits (82), Expect = 4.7,   Method: Composition-based stats.
 Identities = 7/173 (4%), Positives = 24/173 (13%), Gaps = 16/173 (9%)

Query: 52  SLNYHIETCGQKSYNGVAILSKYQPI-EIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
               ++           +    +           G  +                   +  
Sbjct: 683 YAGPYVCWWHYTGPCRRSWWRPWYADPYDDRRNAGPYVCWWYYAGPYVCRWYYAGPYVCW 742

Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170
            +       +  +      +  R                        P          ++
Sbjct: 743 WHYTGPYRRSWWRPWYADPYDDRRNAGPYVCWWYYAGPYVCRWNYAGPYVCRWNYADPYD 802

Query: 171 NDACFTLEVRQSFQ-------------KLQNMGFTDAIRATHDTHHLY--SFW 208
           +       V   +               +    +             Y  S+W
Sbjct: 803 DRRNAGPYVCWWYYAGPYVCRWYYAGPYVCRWYYAGPYVCWWHYTGPYRRSWW 855



 Score = 35.1 bits (79), Expect = 9.7,   Method: Composition-based stats.
 Identities = 13/172 (7%), Positives = 20/172 (11%), Gaps = 5/172 (2%)

Query: 47  FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
               +          + +   V       P     +  G  +             N    
Sbjct: 751 RSWWRPWYADPYDDRRNAGPYVCWWYYAGPYVCRWNYAGPYVCRWNYADPYDDRRNAGPY 810

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
                Y                 W                   +   +   P        
Sbjct: 811 VCWWYYAGPYVCRWYYAGPYVCRWYYAGPYVCWWHYTGPYRRSWWRPWYADPYDDRRDAG 870

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH-----HLYSFWDYYAD 213
                       V                              Y  W YYA 
Sbjct: 871 PYVCRWYYAGPYVCWWHYTGPYRRSWWRAWYADPYDDRRNAGPYVCWWYYAG 922


>gi|226289942|gb|EEH45426.1| glucose-repressible alcohol dehydrogenase transcriptional effector
           [Paracoccidioides brasiliensis Pb18]
          Length = 771

 Score = 36.3 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 11/22 (50%), Positives = 12/22 (54%)

Query: 17  RIHNLAAWIKENNPDIICLQET 38
           R   L   IK  N DI+CLQE 
Sbjct: 417 RRDLLLNEIKGYNADIVCLQEI 438


>gi|295661161|ref|XP_002791136.1| glucose-repressible alcohol dehydrogenase transcriptional effector
           [Paracoccidioides brasiliensis Pb01]
 gi|226281063|gb|EEH36629.1| glucose-repressible alcohol dehydrogenase transcriptional effector
           [Paracoccidioides brasiliensis Pb01]
          Length = 769

 Score = 36.3 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 11/22 (50%), Positives = 12/22 (54%)

Query: 17  RIHNLAAWIKENNPDIICLQET 38
           R   L   IK  N DI+CLQE 
Sbjct: 417 RRDLLLNEIKGYNADIVCLQEI 438


>gi|225682536|gb|EEH20820.1| glucose-repressible alcohol dehydrogenase transcriptional effector
           [Paracoccidioides brasiliensis Pb03]
          Length = 607

 Score = 36.3 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 11/22 (50%), Positives = 12/22 (54%)

Query: 17  RIHNLAAWIKENNPDIICLQET 38
           R   L   IK  N DI+CLQE 
Sbjct: 253 RRDLLLNEIKGYNADIVCLQEI 274


>gi|156349174|ref|XP_001621948.1| hypothetical protein NEMVEDRAFT_v1g143109 [Nematostella vectensis]
 gi|156208312|gb|EDO29848.1| predicted protein [Nematostella vectensis]
          Length = 388

 Score = 36.3 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 7/170 (4%), Positives = 28/170 (16%), Gaps = 4/170 (2%)

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
                 +  +      + ++                +      +    +       +   
Sbjct: 30  WWACWRRNCWTRGTWWACWRWNSWTRGTWWACWRWNSWTRGTWWACWRRNSWTRGNWWAC 89

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLEL----EEPLIFAGDYNIIPQPHDCYNPIIWEN 171
               + T+      W        +              +   +         +      N
Sbjct: 90  WRWNSWTRSTWWACWRWNCWTRGTWWACWRRNSWTRSTWWACWRGNSWTRGTWWACWRRN 149

Query: 172 DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI 221
                             G   A    +       +  +  +SW++    
Sbjct: 150 SWTRGTWWACWRWNSWTRGTWWACWKWNSWTRGTWWACWRRNSWTRGTWW 199


>gi|147820051|emb|CAN60555.1| hypothetical protein VITISV_013544 [Vitis vinifera]
          Length = 269

 Score = 36.3 bits (82), Expect = 4.6,   Method: Composition-based stats.
 Identities = 10/62 (16%), Positives = 23/62 (37%), Gaps = 11/62 (17%)

Query: 201 THHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKP-SDHTPVI 258
              ++++          N+   R+D  +++P               R   +P SDH P++
Sbjct: 138 QGGVFTW-----SGGLNNQSWARLDRFLVTPSXLDXFSGVI----QRRLPRPVSDHFPIL 188

Query: 259 VS 260
           + 
Sbjct: 189 LE 190


>gi|317032663|ref|XP_001394168.2| sphingomyelinase family protein [Aspergillus niger CBS 513.88]
          Length = 461

 Score = 36.3 bits (82), Expect = 4.7,   Method: Composition-based stats.
 Identities = 37/327 (11%), Positives = 70/327 (21%), Gaps = 49/327 (14%)

Query: 4   VTVATWNVNSIR-------ARIHNLAAWIKENNP--DIICLQETKTEDK-----NFPFET 49
           + + T N   ++       AR+  +   +   +P  +I+ LQE  T+             
Sbjct: 18  IRIFTLNCWGLKYIAKHRHARLAEIGRQLAIASPPPEIVGLQECWTQQDYESIRQQTRHI 77

Query: 50  LQSLNYHIETCG---------QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT 100
           L    ++                                        +          F 
Sbjct: 78  LPYGKFYFGGIWGAGLAILSKWPIEESSMFAYPLNGRPTAFFRGDWYVGKGVACARVRFG 137

Query: 101 INTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP 160
              Q +        H                 +    A       E              
Sbjct: 138 PGVQDVAEVFCTHLHAPYEREPNDSYICHRTAQAWEIAKLMRGAAERGHLVIGLGDFNML 197

Query: 161 HDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY-SF-WDYYADSW--- 215
              +      +       V Q   K       +           + ++ W          
Sbjct: 198 PSSFVLHPDSSVGAAIDPVEQKRGKPIPSAEYNITENGATCDGKFNTWRWSKEDQKRLEK 257

Query: 216 ------SKN----KGIRIDHIMLS--------PEATSLLHS---ARIDTKPRGWTKPSDH 254
                  K+    KG R+D+I +         P     + S   +  +  P      SDH
Sbjct: 258 GQDIVVDKDAPCPKGKRLDYIFVGDGNYPPLYPAPRWSVESTRLSMTERHPTLRCSLSDH 317

Query: 255 TPVIVSLDIPEPRKKQQDSTSQNMKPI 281
             V   +      K   D+T  +  P+
Sbjct: 318 FAVEAVITRVPSEKVDNDTTISHQSPV 344


>gi|47230227|emb|CAG10641.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 422

 Score = 36.3 bits (82), Expect = 4.7,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 25/62 (40%), Gaps = 5/62 (8%)

Query: 17 RIHNLAAWIKENNPDIICLQETKTEDKNF---PFETLQSLNYHIETCGQKSYNGVAILSK 73
          R   +   I++  PDI+CLQE   ++ +F    +  L  L Y      +         + 
Sbjct: 34 RCRRILLEIQKWAPDILCLQEV--QENHFYQHVYPVLSQLGYSCAYKRRTGNKTDGCATC 91

Query: 74 YQ 75
          Y+
Sbjct: 92 YR 93


>gi|147788698|emb|CAN69754.1| hypothetical protein VITISV_024938 [Vitis vinifera]
          Length = 971

 Score = 36.3 bits (82), Expect = 4.8,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 21/61 (34%), Gaps = 9/61 (14%)

Query: 201 THHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
              ++++          N+   R+D  +++        S     + R     SDH PV +
Sbjct: 19  QGGVFTW-----SGGPNNQSWARLDRFLVNTSWLDQFSSVL---QSRLPRPLSDHFPVSL 70

Query: 260 S 260
            
Sbjct: 71  E 71


>gi|260770527|ref|ZP_05879460.1| hypothetical protein VFA_003594 [Vibrio furnissii CIP 102972]
 gi|260615865|gb|EEX41051.1| hypothetical protein VFA_003594 [Vibrio furnissii CIP 102972]
          Length = 264

 Score = 36.3 bits (82), Expect = 4.8,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 17/47 (36%), Gaps = 11/47 (23%)

Query: 223 IDHIMLSPEATSLLH------SARIDTKPRGWTKPSDHTPVIVSLDI 263
           IDHI++SP   +         S  +          SDH P+   L  
Sbjct: 223 IDHIIISPTLKASATQQVNFESQDVLRYAL-----SDHCPLRSELQW 264


>gi|156386176|ref|XP_001633789.1| predicted protein [Nematostella vectensis]
 gi|156220864|gb|EDO41726.1| predicted protein [Nematostella vectensis]
          Length = 111

 Score = 36.3 bits (82), Expect = 4.8,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 28/73 (38%), Gaps = 8/73 (10%)

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
           +   L N          H   H  ++     D  + N+   IDHI+++ +    L + R+
Sbjct: 34  ADFCLNNDLVNGGTIFPHKNIHKLTWMS--PDGRTLNQ---IDHIIINGKWRRSLLNVRV 88

Query: 242 DTKPRGWTKPSDH 254
               RG    SDH
Sbjct: 89  Y---RGDDASSDH 98


>gi|291536503|emb|CBL09615.1| 4-alpha-glucanotransferase [Roseburia intestinalis M50/1]
          Length = 513

 Score = 36.3 bits (82), Expect = 4.8,   Method: Composition-based stats.
 Identities = 20/171 (11%), Positives = 44/171 (25%), Gaps = 3/171 (1%)

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                +     +   + +  ++            +      T  +     R+        
Sbjct: 125 FAAFCKDEAEWLDEYALFMALKDANGGVAWYEWEKDLKTRKTEALKEA--RVTYAEDIAF 182

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
             +    +  +   +K ++      +  + P+  AGD   +      +      N     
Sbjct: 183 YKMLQYLFFKQWWDLKAYVNDLGIEIIGDVPIYVAGDSADVWADPGQFYLDEELNPIDVA 242

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI-RIDHI 226
                +F     +      R        YS+W     + SK   I RIDH 
Sbjct: 243 GCPPDAFSADGQLWGNPLFRWDAMKKDGYSWWTKRVKAMSKLYDIVRIDHF 293


>gi|242095430|ref|XP_002438205.1| hypothetical protein SORBIDRAFT_10g009570 [Sorghum bicolor]
 gi|241916428|gb|EER89572.1| hypothetical protein SORBIDRAFT_10g009570 [Sorghum bicolor]
          Length = 468

 Score = 36.3 bits (82), Expect = 4.8,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 18/54 (33%), Gaps = 7/54 (12%)

Query: 224 DHIMLSPEAT-SLLHS---ARIDTKPRG---WTKPSDHTPVIVSLDIPEPRKKQ 270
           D++  +     S +       +  + RG       SDH P++     PE     
Sbjct: 382 DYLWHTRGIECSRVLDTLPIGVLRRTRGLPTREIGSDHLPIVAEFSFPESVDDS 435


>gi|260589359|ref|ZP_05855272.1| beta-galactosidase [Blautia hansenii DSM 20583]
 gi|260540440|gb|EEX21009.1| beta-galactosidase [Blautia hansenii DSM 20583]
          Length = 1807

 Score = 36.3 bits (82), Expect = 4.8,   Method: Composition-based stats.
 Identities = 14/194 (7%), Positives = 41/194 (21%), Gaps = 10/194 (5%)

Query: 38   TKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEA 97
            TK      P E    +N+ I+       N      +            +  +      E 
Sbjct: 1540 TKATLTAVPKEGFAFVNWTIDGQEVSKENPYIHTVETDATITANFERIEVENEGWVQTEN 1599

Query: 98   TFTINTQTLRIGNLYLPHGNPI----------TSTKYDDKISWIKRFLRFASQRLELEEP 147
             +       ++       G                  ++   ++ ++       + ++  
Sbjct: 1600 GWEYYENGQKVVGWKEVSGKWYYFEENGLMQTGWVFVNNHWYYMDQWGAMCIGWVAVDGH 1659

Query: 148  LIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF 207
              +   +  +       N   +  D    ++   +                     +   
Sbjct: 1660 WYYMDQWGAMCTGWVSVNGHWYHMDQWGAMQTGWALVDSNWYYLNTDGSMAIGWVAVNGH 1719

Query: 208  WDYYADSWSKNKGI 221
            W Y     +   G 
Sbjct: 1720 WYYMDQWGAMQTGW 1733


>gi|156367134|ref|XP_001627274.1| predicted protein [Nematostella vectensis]
 gi|156214179|gb|EDO35174.1| predicted protein [Nematostella vectensis]
          Length = 302

 Score = 36.3 bits (82), Expect = 4.8,   Method: Composition-based stats.
 Identities = 15/166 (9%), Positives = 38/166 (22%)

Query: 47  FETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL 106
                +  Y +       Y      + Y  +++            A +            
Sbjct: 39  LHMYCAHYYRLHMYCAHYYRLHMYCAHYYRLDMYCAHYYRLDMYCAHYYRLHMYCAHYYR 98

Query: 107 RIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNP 166
                   +   +    Y     +   + R            ++   Y  +      Y  
Sbjct: 99  LHMYCAHYYRLHMYRAHYYRLHMYRAHYYRLDMYCAHYYRLHMYRAHYYTLHMYFAHYYT 158

Query: 167 IIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYA 212
           +   +   + L + ++     +M      R   +  H Y+   Y A
Sbjct: 159 LHMYSAHYYRLHMYRAHYHRLHMYRVHYYRLHMNCAHCYTLHMYRA 204


>gi|302814905|ref|XP_002989135.1| hypothetical protein SELMODRAFT_427753 [Selaginella moellendorffii]
 gi|300143035|gb|EFJ09729.1| hypothetical protein SELMODRAFT_427753 [Selaginella moellendorffii]
          Length = 570

 Score = 36.3 bits (82), Expect = 4.9,   Method: Composition-based stats.
 Identities = 17/114 (14%), Positives = 38/114 (33%), Gaps = 7/114 (6%)

Query: 148 LIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF 207
            +  GD+N + +  D     + +        +         +  T  I         +++
Sbjct: 360 WMVTGDFNFVEEVLDKDGGEMRDKRTSRERAMWAQLVLALGLEDTYNIPGFVQHQPRFTW 419

Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
            ++      +    R+D   +SPE      ++       G+   SDH  V ++L
Sbjct: 420 QEHQQRGIQR----RLDRFYVSPEL---CRNSGKLDITTGYRDFSDHNSVSLTL 466


>gi|282897774|ref|ZP_06305773.1| hypothetical protein CRD_01893 [Raphidiopsis brookii D9]
 gi|281197453|gb|EFA72350.1| hypothetical protein CRD_01893 [Raphidiopsis brookii D9]
          Length = 257

 Score = 36.3 bits (82), Expect = 4.9,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 24/74 (32%), Gaps = 7/74 (9%)

Query: 188 NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRG 247
           +      +          +F D+   +W        D I         ++   ID +   
Sbjct: 185 DNYRIRDVLGNLPLESQKTFHDFTGQAWDAR-----DTIYCDHRW--QINHVIIDDQRWE 237

Query: 248 WTKPSDHTPVIVSL 261
              PSDH PVIV L
Sbjct: 238 GIWPSDHFPVIVKL 251


>gi|222637117|gb|EEE67249.1| hypothetical protein OsJ_24400 [Oryza sativa Japonica Group]
          Length = 253

 Score = 36.3 bits (82), Expect = 4.9,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 20/37 (54%), Gaps = 5/37 (13%)

Query: 7  ATWNVNS-----IRARIHNLAAWIKENNPDIICLQET 38
           T+NV S     +  R+  + + ++++ PD+I  QE 
Sbjct: 1  MTYNVWSREDVAVYKRMKAIGSLVEKHKPDVIFFQEI 37


>gi|212536828|ref|XP_002148570.1| reverse transcriptase, putative [Penicillium marneffei ATCC 18224]
 gi|210070969|gb|EEA25059.1| reverse transcriptase, putative [Penicillium marneffei ATCC 18224]
          Length = 1262

 Score = 36.3 bits (82), Expect = 4.9,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 21/57 (36%), Gaps = 5/57 (8%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKP-SDHTPVIVSLDIPEPRKKQQDSTSQNM 278
           ID   LS   ++ L    I  +     +  SDH P+   +DI  P  +     +   
Sbjct: 179 IDLTFLSSSLSNRL----ILVERADAIQHDSDHWPIRTQIDIQTPVNEPPKRRNWAA 231


>gi|328472297|gb|EGF43167.1| extracellular nuclease-like protein [Vibrio parahaemolyticus 10329]
          Length = 984

 Score = 36.3 bits (82), Expect = 4.9,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 24/63 (38%), Gaps = 20/63 (31%)

Query: 223 IDHIMLSPEATSLLHSAR---ID-----------------TKPRGWTKPSDHTPVIVSLD 262
           +DH + S      + +     I+                  K +     SDH PVI+++D
Sbjct: 785 LDHALASNSLAQKVVAIEDWHINSLESNLFEYGSKYTGDMPKYKDAFSASDHDPVIIAID 844

Query: 263 IPE 265
           +P+
Sbjct: 845 LPD 847


>gi|260900883|ref|ZP_05909278.1| endonuclease/exonuclease/phosphatase family protein [Vibrio
           parahaemolyticus AQ4037]
 gi|308106508|gb|EFO44048.1| endonuclease/exonuclease/phosphatase family protein [Vibrio
           parahaemolyticus AQ4037]
          Length = 984

 Score = 36.3 bits (82), Expect = 4.9,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 24/63 (38%), Gaps = 20/63 (31%)

Query: 223 IDHIMLSPEATSLLHSAR---ID-----------------TKPRGWTKPSDHTPVIVSLD 262
           +DH + S      + +     I+                  K +     SDH PVI+++D
Sbjct: 785 LDHALASNSLAQKVVAIEDWHINSLESNLFEYGSKYTGDMPKYKDAFSASDHDPVIIAID 844

Query: 263 IPE 265
           +P+
Sbjct: 845 LPD 847


>gi|260786407|ref|XP_002588249.1| hypothetical protein BRAFLDRAFT_86696 [Branchiostoma floridae]
 gi|229273409|gb|EEN44260.1| hypothetical protein BRAFLDRAFT_86696 [Branchiostoma floridae]
          Length = 754

 Score = 36.3 bits (82), Expect = 4.9,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 19/39 (48%), Gaps = 2/39 (5%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           IDHI++    ++   S ++          SDH+P++ S 
Sbjct: 609 IDHILIPYSLSTEAVSCKVIGDC--SLNLSDHSPIVASF 645


>gi|153839526|ref|ZP_01992193.1| nuclease [Vibrio parahaemolyticus AQ3810]
 gi|149746952|gb|EDM57940.1| nuclease [Vibrio parahaemolyticus AQ3810]
          Length = 632

 Score = 36.3 bits (82), Expect = 4.9,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 24/63 (38%), Gaps = 20/63 (31%)

Query: 223 IDHIMLSPEATSLLHSAR---ID-----------------TKPRGWTKPSDHTPVIVSLD 262
           +DH + S      + +     I+                  K +     SDH PVI+++D
Sbjct: 433 LDHALASNSLAQKVVAIEDWHINSLESNLFEYGSKYTGDMPKYKDAFSASDHDPVIIAID 492

Query: 263 IPE 265
           +P+
Sbjct: 493 LPD 495


>gi|28899573|ref|NP_799178.1| extracellular nuclease-like protein [Vibrio parahaemolyticus RIMD
           2210633]
 gi|260361411|ref|ZP_05774473.1| endonuclease/exonuclease/phosphatase family protein [Vibrio
           parahaemolyticus K5030]
 gi|260876683|ref|ZP_05889038.1| nuclease [Vibrio parahaemolyticus AN-5034]
 gi|28807809|dbj|BAC61062.1| extracellular nuclease-related protein [Vibrio parahaemolyticus
           RIMD 2210633]
 gi|308093950|gb|EFO43645.1| nuclease [Vibrio parahaemolyticus AN-5034]
 gi|308112902|gb|EFO50442.1| endonuclease/exonuclease/phosphatase family protein [Vibrio
           parahaemolyticus K5030]
          Length = 984

 Score = 36.3 bits (82), Expect = 4.9,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 24/63 (38%), Gaps = 20/63 (31%)

Query: 223 IDHIMLSPEATSLLHSAR---ID-----------------TKPRGWTKPSDHTPVIVSLD 262
           +DH + S      + +     I+                  K +     SDH PVI+++D
Sbjct: 785 LDHALASNSLAQKVVAIEDWHINSLESNLFEYGSKYTGDMPKYKDAFSASDHDPVIIAID 844

Query: 263 IPE 265
           +P+
Sbjct: 845 LPD 847


>gi|260592150|ref|ZP_05857608.1| oxidoreductase, Gfo/Idh/MocA family [Prevotella veroralis F0319]
 gi|260535784|gb|EEX18401.1| oxidoreductase, Gfo/Idh/MocA family [Prevotella veroralis F0319]
          Length = 515

 Score = 36.3 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 18/198 (9%), Positives = 48/198 (24%), Gaps = 9/198 (4%)

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
                    G+ +++     +         L   +      ++       +         
Sbjct: 76  AVERWTHIPGIQVMALCDFEKDRAERCQQYLRKASMPAADIYSGEDGYKELCKRKDIDLV 135

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
            I        +   +         +E+   +  +  + +I          +   + C+  
Sbjct: 136 YIAPDWKHHFLVAKEAMTHGKHVAIEVPAAMNMSEIWQLIELSEKNRLHCMMLENCCYDF 195

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYS-FWD-YYADSWSKNKGIRIDH-------IML 228
               S    Q   F + +       H  + FW+ Y+        G R+D+       +  
Sbjct: 196 FELNSLNMAQKGIFGEILYVQGAYRHDLTPFWNAYWKKDKEDKLGWRLDYNQKFRGDVYA 255

Query: 229 SPEATSLLHSARIDTKPR 246
           +     +     I    R
Sbjct: 256 THGLGPIAQVLDIHRGDR 273


>gi|260814894|ref|XP_002602148.1| hypothetical protein BRAFLDRAFT_234265 [Branchiostoma floridae]
 gi|229287455|gb|EEN58160.1| hypothetical protein BRAFLDRAFT_234265 [Branchiostoma floridae]
          Length = 215

 Score = 36.3 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 8/141 (5%), Positives = 19/141 (13%)

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
           I                +  I     +          F    +     T       +   
Sbjct: 5   IYWWWWIFTCLHWCWGIFTCIHWWWWIFTCLHWCWGIFTCIHWWWWIFTCLHWCWGIFTC 64

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
                  +         F                 G +  I      +  + W       
Sbjct: 65  IHWWWWIFTCLHWCWGIFTCIHWWWWIFTCLHWCWGIFTCIHWWWWIFTCLHWCWGIFTC 124

Query: 177 LEVRQSFQKLQNMGFTDAIRA 197
           +          +      +  
Sbjct: 125 IHWWWWIFTCLHWCSRGDLHM 145


>gi|169625455|ref|XP_001806131.1| hypothetical protein SNOG_16000 [Phaeosphaeria nodorum SN15]
 gi|160705657|gb|EAT76579.2| hypothetical protein SNOG_16000 [Phaeosphaeria nodorum SN15]
          Length = 890

 Score = 36.3 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 22/185 (11%), Positives = 42/185 (22%), Gaps = 17/185 (9%)

Query: 85  GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL 144
                    +         + L +          I                       + 
Sbjct: 15  FCIHKTLKNYTIIQAQGKNRGLLVTLFLTTEHGNIAIHNL-YNYERAADIDELIEACRDK 73

Query: 145 EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL 204
               I  GD+N+  +  +               E     QK   +G T       +    
Sbjct: 74  TYAHIIIGDFNLRHKDWEGPTCRN------PHPEANTLVQKAGAIGMT-----CVNKPGH 122

Query: 205 YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIP 264
           +++      +        ID   +S                      SDH P+ V+LD+ 
Sbjct: 123 FTYSRGEFKTPGNEYKSVIDLAFVSTLLVGHAS-----HDVLDGVFDSDHRPIRVTLDLR 177

Query: 265 EPRKK 269
             R++
Sbjct: 178 VERRR 182


>gi|308453155|ref|XP_003089323.1| CRE-LAM-1 protein [Caenorhabditis remanei]
 gi|308241157|gb|EFO85109.1| CRE-LAM-1 protein [Caenorhabditis remanei]
          Length = 1264

 Score = 36.3 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 15/167 (8%), Positives = 29/167 (17%), Gaps = 5/167 (2%)

Query: 58   ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
             +     ++ V  +   Q  E   +L                  N + +      +  G 
Sbjct: 1059 VSGQCPCHDNVIGMQCDQCAENHFNLASGAGCEACGCDPNGVVPNHEGVPHLQCNIFDGQ 1118

Query: 118  PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
                     +       L +                    P                   
Sbjct: 1119 CQCKPGRGGRKCDQCEDLYWGDPTTPDGCH-----RCECNPTGSKSLQCHRNNGTCECQP 1173

Query: 178  EVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRID 224
                +       G+T      +     +  WD       K     ID
Sbjct: 1174 GSGGALCNECARGYTGQWPYCNPCGECFHQWDNIMQKLQKQVHALID 1220


>gi|255713110|ref|XP_002552837.1| KLTH0D02574p [Lachancea thermotolerans]
 gi|238934217|emb|CAR22399.1| KLTH0D02574p [Lachancea thermotolerans]
          Length = 368

 Score = 36.3 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 19/51 (37%), Gaps = 11/51 (21%)

Query: 224 DHIMLSP---EATSLLHSARIDTKPR--------GWTKPSDHTPVIVSLDI 263
           D+I           +L  A +  + R            PSDH PV+  L++
Sbjct: 316 DYIWYHDKDFRLKRILSGAEVSQELRELQEFGLPNKDHPSDHIPVLAELEL 366


>gi|218193742|gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indica Group]
          Length = 1874

 Score = 36.3 bits (82), Expect = 5.0,   Method: Composition-based stats.
 Identities = 22/139 (15%), Positives = 46/139 (33%), Gaps = 12/139 (8%)

Query: 129 SWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQS------ 182
               R      +    +  L+++    I     D +  I   N+A +  E +        
Sbjct: 52  CCTWRATFLYGEPRAQDRHLMWSLLRRIRSNSGDPWLMIGDFNEAMWQTEHKSHRKRSES 111

Query: 183 -FQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI 241
             +  + +     +         ++F +   +    N  +R+D  + SP  +S    A I
Sbjct: 112 QMRDFREVLSECDLHDIGFQGAPWTFCNMQREGR--NVKVRLDRGVASPAWSSRFPQAVI 169

Query: 242 DTKPRGWTKPSDHTPVIVS 260
                  T  SDH P+++ 
Sbjct: 170 ---THLTTPSSDHAPLLLE 185


>gi|193599016|ref|XP_001948281.1| PREDICTED: inositol polyphosphate 5-phosphatase K-like
           [Acyrthosiphon pisum]
          Length = 465

 Score = 36.3 bits (82), Expect = 5.1,   Method: Composition-based stats.
 Identities = 37/302 (12%), Positives = 76/302 (25%), Gaps = 52/302 (17%)

Query: 7   ATWNVN--SIRARIHNLAAW--IKENN-PDI--ICLQETKTEDKNFPFETLQSL------ 53
            T+NV   S R  + +L  W    E+  PD      QE K + +N   +++         
Sbjct: 9   VTYNVATRSPRQPLEDLLQWNGRTEHQLPDFCLFGFQEIKAQPQNLLLDSVFDDPWTAAL 68

Query: 54  -----NYHIETCGQKSYNGVAILSKYQPIEIV----------THLPGDDLDVQARFIEAT 98
                 YH          G+ +    +   +                     +     + 
Sbjct: 69  RDVLSGYHYVKIRTVKMVGLLLNVFCKRKHVPLLKEMQTSETRTGILGVWGNKGAVSFSF 128

Query: 99  FTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIP 158
                    +   +  H   +     D       +    + + +   + + + GD N   
Sbjct: 129 KIYGATICCVNCHFAAHEEYLKHRINDYHTIIESQHFGSSRKVILDHDYVFWFGDLNFRL 188

Query: 159 QPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKN 218
                 +               ++   L ++   D + +       +  +  +   +   
Sbjct: 189 DNSKLKSAEEIARHVNNVNLSLRTATTLSDIWAQDELSSVMQKSKAFKGFFEHLPMFPPT 248

Query: 219 KGIRIDHIMLS--------PEATSLLHSARID------------TKPRGWTKPSDHTPVI 258
              R  +I  S        P  T  +    ID             K     + SDH PV 
Sbjct: 249 Y--R--YIFGSGSYDLKRRPAWTDRILYKTIDSSNEKCVLEVLSYKYIESIRLSDHRPVY 304

Query: 259 VS 260
             
Sbjct: 305 SE 306


>gi|322502593|emb|CBZ37676.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 832

 Score = 36.3 bits (82), Expect = 5.1,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 20/47 (42%), Gaps = 8/47 (17%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWT--------KPSDHTPVIVSL 261
           ID+I  S ++  +L +  I ++              PSDH  ++  L
Sbjct: 781 IDYIFFSEDSLEVLRTVPIPSEAELTENFALPNKKYPSDHVALVADL 827


>gi|322495024|emb|CBZ30327.1| conserved hypothetical protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 704

 Score = 36.3 bits (82), Expect = 5.1,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 20/47 (42%), Gaps = 8/47 (17%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWT--------KPSDHTPVIVSL 261
           ID+I  S ++  +L +  I ++              PSDH  ++  L
Sbjct: 653 IDYIFFSEDSLEVLRTVPIPSEAELTENFALPNKKYPSDHVALVADL 699


>gi|321398689|emb|CAM71649.2| conserved hypothetical protein [Leishmania infantum JPCM5]
          Length = 832

 Score = 36.3 bits (82), Expect = 5.1,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 20/47 (42%), Gaps = 8/47 (17%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWT--------KPSDHTPVIVSL 261
           ID+I  S ++  +L +  I ++              PSDH  ++  L
Sbjct: 781 IDYIFFSEDSLEVLRTVPIPSEAELTENFALPNKKYPSDHVALVADL 827


>gi|146099120|ref|XP_001468563.1| hypothetical protein [Leishmania infantum]
          Length = 465

 Score = 36.3 bits (82), Expect = 5.1,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 20/47 (42%), Gaps = 8/47 (17%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWT--------KPSDHTPVIVSL 261
           ID+I  S ++  +L +  I ++              PSDH  ++  L
Sbjct: 414 IDYIFFSEDSLEVLRTVPIPSEAELTENFALPNKKYPSDHVALVADL 460


>gi|157875900|ref|XP_001686320.1| hypothetical protein [Leishmania major strain Friedlin]
 gi|68129394|emb|CAJ07935.1| conserved hypothetical protein [Leishmania major strain Friedlin]
          Length = 705

 Score = 36.3 bits (82), Expect = 5.1,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 20/47 (42%), Gaps = 8/47 (17%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWT--------KPSDHTPVIVSL 261
           ID+I  S ++  +L +  I ++              PSDH  ++  L
Sbjct: 654 IDYIFFSEDSLEVLRTVPIPSEAELTENFALPNKKYPSDHVALVADL 700


>gi|119173435|ref|XP_001239168.1| hypothetical protein CIMG_10190 [Coccidioides immitis RS]
          Length = 346

 Score = 36.3 bits (82), Expect = 5.2,   Method: Composition-based stats.
 Identities = 36/279 (12%), Positives = 73/279 (26%), Gaps = 44/279 (15%)

Query: 6   VATWNVNS------IRARIHNLAAWIKENNP--DIICLQE-TKTEDKNFPFETLQSLNYH 56
           + TWN+N       IR     +   I++  P  D+I LQE T+T         L ++ + 
Sbjct: 73  LVTWNINGTDLAPDIRTSA--IVTHIRDMRPVMDVIFLQEVTRTT-----LSVLLAMPWV 125

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
            E       +  +         I T                     +   R+        
Sbjct: 126 REQWYSSEADATSWG----HQSISTMTLLSKSRFHGLKCTPERAALSAVWRVPFPSHFGR 181

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWEN----- 171
           + +    +    +  +           +    +      I P        II        
Sbjct: 182 DALCCDIFLPICTPSECKKSVPGSHARIRLVNVHLDSLAIQPSYRPRQLSIIASYLRAAG 241

Query: 172 ----DACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHI- 226
                  F   + +    +      D           +++      ++  N   R+D + 
Sbjct: 242 RGLVAGDFNPVLPEDDSLINENNLVDVWTELRPNDPGFTWGIDGKQAYPAN---RLDKVA 298

Query: 227 ----------MLSPEATSLLHSARIDTKPRGWTKPSDHT 255
                     ++ P   +  ++A    + R   K SDH 
Sbjct: 299 KLGLKTHEIEVIPPGTCTYAYAAENRPEER-EHKWSDHC 336


>gi|282899308|ref|ZP_06307277.1| hypothetical protein CRC_00757 [Cylindrospermopsis raciborskii
           CS-505]
 gi|281195765|gb|EFA70693.1| hypothetical protein CRC_00757 [Cylindrospermopsis raciborskii
           CS-505]
          Length = 256

 Score = 36.3 bits (82), Expect = 5.2,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 23/74 (31%), Gaps = 7/74 (9%)

Query: 188 NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRG 247
           +                 +F D+   +W        D I         ++   ID +   
Sbjct: 185 DNYRIKDALGNLPVESQKTFHDFTGQAWDPR-----DTIYCDRRW--QINQVIIDDQQWE 237

Query: 248 WTKPSDHTPVIVSL 261
              PSDH PVIV L
Sbjct: 238 GIWPSDHFPVIVKL 251


>gi|159465185|ref|XP_001690803.1| CCR4-NOT transcription complex, subunit 6-like protein
          [Chlamydomonas reinhardtii]
 gi|158279489|gb|EDP05249.1| CCR4-NOT transcription complex, subunit 6-like protein
          [Chlamydomonas reinhardtii]
          Length = 369

 Score = 36.3 bits (82), Expect = 5.2,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 5/56 (8%)

Query: 16 ARIHNLAAWIKENNPDIICLQETKTEDKNFPFE---TLQSLNYHIETCGQKSYNGV 68
          +R   +   I+  + DIICLQE + +   F  E    L +  Y      ++  + V
Sbjct: 28 SRRERILQEIESYSSDIICLQEVEAQV--FAGELQPWLAARGYRGHYLPRQYGDSV 81


>gi|224114253|ref|XP_002332412.1| predicted protein [Populus trichocarpa]
 gi|222832345|gb|EEE70822.1| predicted protein [Populus trichocarpa]
          Length = 349

 Score = 36.3 bits (82), Expect = 5.3,   Method: Composition-based stats.
 Identities = 35/261 (13%), Positives = 78/261 (29%), Gaps = 34/261 (13%)

Query: 4   VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + +  WN+  +   I +  L   I +    +  L ET+ +DKN                 
Sbjct: 1   MIIGCWNIRGLNDPIKHSELRRLIHQERIALFGLVETRVKDKNKD-----------NVSQ 49

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
               +   + +          +  +   V+      +      ++ I    +     I  
Sbjct: 50  LLLRSWSFLYNYDFSCRGRIWVCWNADTVKVDVFGMSDQAIHVSVTILATNISFNTSIIY 109

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
              +  +         +        P I  GD+N I    D              L+   
Sbjct: 110 GDNNASLREALWSDIVSRSDGWESTPWILMGDFNAIRNQSDKLGGSTTWAGTMHRLDTCI 169

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR-IDHIMLSP--EATSLLHS 238
              K+ ++ ++            Y++    ++   +N  +R +D ++++        L  
Sbjct: 170 REAKVDDLWYSGMH---------YTW----SNQCPENLIMRKLDRVLVNEKWNLNFPLSE 216

Query: 239 ARIDTKPRGWTKPSDHTPVIV 259
           AR           SDH+P++V
Sbjct: 217 ARFLPSGM-----SDHSPMVV 232


>gi|169620580|ref|XP_001803701.1| hypothetical protein SNOG_13492 [Phaeosphaeria nodorum SN15]
 gi|111057819|gb|EAT78939.1| hypothetical protein SNOG_13492 [Phaeosphaeria nodorum SN15]
          Length = 358

 Score = 36.3 bits (82), Expect = 5.3,   Method: Composition-based stats.
 Identities = 23/182 (12%), Positives = 44/182 (24%), Gaps = 2/182 (1%)

Query: 37  ETKTE--DKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARF 94
           ETK +  DK         L    +   + S + + + S    +         D+  Q   
Sbjct: 85  ETKLKVVDKQIKILMNNYLKMFYQEYRKHSRDELRMWSFPTIVWQHYQKMFCDVTRQRPD 144

Query: 95  IEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDY 154
            E     +   +  G+ +               I   K    F++ +    E  +  G  
Sbjct: 145 FELDECFDNGNVVPGSKWNGWVKGQVDAFPPSLIIHGKEAKSFSTSQGSECEMHMVNGHG 204

Query: 155 NIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADS 214
            ++   +  +                          FT   R        YS   Y  + 
Sbjct: 205 QLVQTIYHVHCGPKLCGTRVDGGPEIVCKHPGHAHQFTKRPREWDPQKGWYSGNPYRYNH 264

Query: 215 WS 216
             
Sbjct: 265 RP 266


>gi|77556102|gb|ABA98898.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1188

 Score = 36.3 bits (82), Expect = 5.3,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 25/58 (43%), Gaps = 9/58 (15%)

Query: 204 LYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARI--DTKPRGWTKPSDHTPVIV 259
            Y++ D   +    N  +R+D  +   +   +  +AR+   T  R     SDH P+ V
Sbjct: 63  PYTY-DNRREGR-NNIRVRLDRALADNDWREMFGNARVSHLTSTR-----SDHCPISV 113


>gi|291538629|emb|CBL11740.1| 4-alpha-glucanotransferase [Roseburia intestinalis XB6B4]
          Length = 513

 Score = 36.3 bits (82), Expect = 5.4,   Method: Composition-based stats.
 Identities = 20/171 (11%), Positives = 44/171 (25%), Gaps = 3/171 (1%)

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
                +     +   + +  ++            +      T  +     R+        
Sbjct: 125 FAAFCKDEAEWLDEYALFMALKDANGGVAWFEWEKDLKTRKTEALKEA--RVTYAEDIAF 182

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
             +    +  +   +K ++      +  + P+  AGD   +      +      N     
Sbjct: 183 YKMLQYLFFKQWWDLKAYVNDLGIEIIGDVPIYVAGDSADVWADPGQFYLDKELNPIDVA 242

Query: 177 LEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI-RIDHI 226
                +F     +      R        YS+W     + SK   I RIDH 
Sbjct: 243 GCPPDAFSADGQLWGNPLFRWDAMKKDGYSWWTKRVKAMSKLYDIVRIDHF 293


>gi|147853273|emb|CAN80672.1| hypothetical protein VITISV_002979 [Vitis vinifera]
          Length = 1102

 Score = 36.3 bits (82), Expect = 5.4,   Method: Composition-based stats.
 Identities = 8/39 (20%), Positives = 16/39 (41%), Gaps = 3/39 (7%)

Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
           R+D  ++S +       A    +       SDH P+++ 
Sbjct: 776 RLDRFLVSEDWEGYFSGAI---QSLLPRIVSDHCPILLD 811


>gi|147794028|emb|CAN60110.1| hypothetical protein VITISV_023618 [Vitis vinifera]
          Length = 867

 Score = 36.3 bits (82), Expect = 5.4,   Method: Composition-based stats.
 Identities = 16/155 (10%), Positives = 35/155 (22%), Gaps = 8/155 (5%)

Query: 4   VTVATWNVNSIR--ARIHNLAAWIKENNPDIICLQETKTED--KNFPFET----LQSLNY 55
           + + +WN       ++   + A I+    D+  LQETK +   +                
Sbjct: 3   LRLLSWNARGTNDSSKRKVIKAMIRIQRVDLFGLQETKIQAMTEGLVRSLGIGRFLDWGT 62

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
                       ++   +     +V               E  +        I +     
Sbjct: 63  LDAHGSTGGNFSISCRLRNVEDXLVWMFXXVYGPFSREEREWMWEEIGXIRGIWDDPWCL 122

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIF 150
           G                +      + L  +  L  
Sbjct: 123 GGDFNGVCLHGSGXRNNQAWAKLDRFLVTQSWLDH 157


>gi|260896624|ref|ZP_05905120.1| nuclease [Vibrio parahaemolyticus Peru-466]
 gi|308086332|gb|EFO36027.1| nuclease [Vibrio parahaemolyticus Peru-466]
          Length = 984

 Score = 36.3 bits (82), Expect = 5.4,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 24/63 (38%), Gaps = 20/63 (31%)

Query: 223 IDHIMLSPEATSLLHSAR---ID-----------------TKPRGWTKPSDHTPVIVSLD 262
           +D+ + S      + +     I+                  K +     SDH PVI+++D
Sbjct: 785 LDYALASNSLAQKVVAIEDWHINSLESNLFEYGSKYTGDMPKYKDAFSASDHDPVIIAID 844

Query: 263 IPE 265
           +P+
Sbjct: 845 LPD 847


>gi|147844361|emb|CAN80026.1| hypothetical protein VITISV_004059 [Vitis vinifera]
          Length = 1114

 Score = 36.3 bits (82), Expect = 5.4,   Method: Composition-based stats.
 Identities = 9/58 (15%), Positives = 20/58 (34%), Gaps = 7/58 (12%)

Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
             +++              R+D  +++ E  S    A    +       SDH P+++ 
Sbjct: 726 GPFTW----TGGADNQSFSRLDRFLVNEEWDSHFGDA---RQFLLPRPVSDHFPILMD 776


>gi|147766078|emb|CAN76931.1| hypothetical protein VITISV_023947 [Vitis vinifera]
          Length = 916

 Score = 36.3 bits (82), Expect = 5.4,   Method: Composition-based stats.
 Identities = 12/126 (9%), Positives = 37/126 (29%), Gaps = 7/126 (5%)

Query: 134 FLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTD 193
                 +    EE     G ++        +N  + + +      +  + ++   +    
Sbjct: 29  PCNRKDKEAMWEELGAIRGIWDEPWCLGGDFNVTLSQRERSRQGSLNGAMRRFAQVVDDL 88

Query: 194 AIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSD 253
            +         +S+    +   +     R+D  +++              + R     SD
Sbjct: 89  DLIDLPLQGGAFSW----SGGRNNQTWARLDRFLVTQSWLDFFRGVV---QCRLPXXTSD 141

Query: 254 HTPVIV 259
           H P+++
Sbjct: 142 HFPILL 147


>gi|254415356|ref|ZP_05029117.1| endonuclease/exonuclease/phosphatase family [Microcoleus
           chthonoplastes PCC 7420]
 gi|196177831|gb|EDX72834.1| endonuclease/exonuclease/phosphatase family [Microcoleus
           chthonoplastes PCC 7420]
          Length = 334

 Score = 36.3 bits (82), Expect = 5.6,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 7/43 (16%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPE 265
           +DH ++SPE         +     G    SDH P+IV L I +
Sbjct: 293 LDHCLISPEI-------NVLAIRTGGDIGSDHRPLIVDLVISD 328


>gi|170592777|ref|XP_001901141.1| hypothetical protein Bm1_48395 [Brugia malayi]
 gi|158591208|gb|EDP29821.1| hypothetical protein Bm1_48395 [Brugia malayi]
          Length = 858

 Score = 36.3 bits (82), Expect = 5.6,   Method: Composition-based stats.
 Identities = 23/217 (10%), Positives = 53/217 (24%), Gaps = 22/217 (10%)

Query: 20  NLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEI 79
           +    +   NPD++ L                 L+  ++   +     V          +
Sbjct: 259 HFVEKLAAENPDVLAL--------------FPPLDTLVKRLTKHREYKVYRRRFEYEKIM 304

Query: 80  VTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFAS 139
                G         +         ++ I        +  T+++ +      +   R A+
Sbjct: 305 AERRRGLHSKDCTPGMLRRMRPFPPSVCIECGISIVTDADTTSQENFVDHVSQDHQREAT 364

Query: 140 QRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMG-FTDAIRAT 198
            +      +     +    Q    Y    +         +  +  +              
Sbjct: 365 CQYYSFPGVHLFEQWMRELQQRSRYKIRRFSMHNESLFFLCAADDRWCRTYGVNSDGLHC 424

Query: 199 HDTHHLYSFWDYYADSWSKNKGIRI----DHIMLSPE 231
                +Y   DY   S  + + +RI    DH   S E
Sbjct: 425 TAFVRVY---DYRRVSRQETRVLRIQYCLDHNFHSDE 458


>gi|54308439|ref|YP_129459.1| hypothetical protein PBPRA1246 [Photobacterium profundum SS9]
 gi|46912868|emb|CAG19657.1| Hypothetical protein PBPRA1246 [Photobacterium profundum SS9]
          Length = 388

 Score = 36.3 bits (82), Expect = 5.6,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 27/70 (38%), Gaps = 17/70 (24%)

Query: 209 DYYADSWSKNKGIRIDHIMLSPEATSLLHSARI------------DTKPRGWTKP---SD 253
              ++ W+   G+R+D+++ S +    +    +             T  +G  +    SD
Sbjct: 318 SGRSNEWTHLSGLRLDYVLPSVDL--SVKQTGVFWPDKKDPLRHLITNEKGKERAQDGSD 375

Query: 254 HTPVIVSLDI 263
           H  V V L +
Sbjct: 376 HRLVWVDLQL 385


>gi|241392429|ref|XP_002409449.1| synaptojanin, putative [Ixodes scapularis]
 gi|215497492|gb|EEC06986.1| synaptojanin, putative [Ixodes scapularis]
          Length = 921

 Score = 35.9 bits (81), Expect = 5.6,   Method: Composition-based stats.
 Identities = 12/31 (38%), Positives = 15/31 (48%)

Query: 240 RIDTKPRGWTKPSDHTPVIVSLDIPEPRKKQ 270
           RI    R   K SDH PV+  +DI   R  +
Sbjct: 742 RIAHYGRAELKTSDHRPVVADIDIEVCRVDE 772


>gi|55641101|ref|XP_510084.1| PREDICTED: angel homolog 1 isoform 4 [Pan troglodytes]
          Length = 682

 Score = 35.9 bits (81), Expect = 5.6,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 29/78 (37%), Gaps = 16/78 (20%)

Query: 6   VATWN---VNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIET 59
           +  WN   VN        L    +  +PDI+CLQE   ++ ++  +    L+ + +    
Sbjct: 284 ILNWNYRFVN--------LMQEFQHWDPDILCLQEV--QEDHYWEQLEPSLRMMGFTCFY 333

Query: 60  CGQKSYNGVAILSKYQPI 77
             +           Y+P 
Sbjct: 334 KRRTGCKTDGCAVCYKPT 351


>gi|282881374|ref|ZP_06290053.1| putative oxidoreductase [Prevotella timonensis CRIS 5C-B1]
 gi|281304780|gb|EFA96861.1| putative oxidoreductase [Prevotella timonensis CRIS 5C-B1]
          Length = 561

 Score = 35.9 bits (81), Expect = 5.7,   Method: Composition-based stats.
 Identities = 23/198 (11%), Positives = 48/198 (24%), Gaps = 9/198 (4%)

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
                    G+ +++     +         L   +      ++       I         
Sbjct: 123 AVERWTHIPGIQVMALCDYEKERAEDCQKYLRKASMPAADIYSGEKGYEEICKRKDIDLV 182

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTL 177
            I +                    +E+   +     + +I          +   + C+  
Sbjct: 183 YIATDWLHHFPVAKCAMENGKHVAIEVPSAMNMHEIWQLIDMSEKTRLHCVMLENCCYDF 242

Query: 178 EVRQSFQKLQNMGFTDAIRATHDTHHLYS-FWD-YYADSWSKNKGIRIDH-------IML 228
               S    Q   F + I A     H  S FWD Y+    +   G R+D+       +  
Sbjct: 243 FELNSLNMAQKGLFGEVIYAQGAYRHELSPFWDHYWKKDQNDKLGWRLDYNQKYRGDVYA 302

Query: 229 SPEATSLLHSARIDTKPR 246
           +     +     I    R
Sbjct: 303 THGLGPVAQVMNIHRGDR 320


>gi|85058440|ref|YP_454142.1| hypothetical protein SG0462 [Sodalis glossinidius str. 'morsitans']
 gi|84778960|dbj|BAE73737.1| hypothetical protein [Sodalis glossinidius str. 'morsitans']
          Length = 411

 Score = 35.9 bits (81), Expect = 5.7,   Method: Composition-based stats.
 Identities = 17/144 (11%), Positives = 35/144 (24%), Gaps = 9/144 (6%)

Query: 11  VNSIRARI--HNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGV 68
           VNS RAR+    L   +   +PD++ + E +  +            Y + +         
Sbjct: 17  VNS-RARLDFPLLLRALLRQDPDVLMVGEIRDPETAAVTLNAARTGYLVLSTLHTLCADS 75

Query: 69  AILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKI 128
               +               ++  R      +     L +                    
Sbjct: 76  VWKRR------RHGAGAAGHNLVRRTQARFGSFAMNGLWLWRWQGLCAEGRFCRGKMIGR 129

Query: 129 SWIKRFLRFASQRLELEEPLIFAG 152
           S     +R  +Q  +     I   
Sbjct: 130 SRRDCGMRLVAQGYQPFRLRIHCW 153


>gi|62859005|ref|NP_001016236.1| angel homolog 1 [Xenopus (Silurana) tropicalis]
 gi|89268167|emb|CAJ82107.1| novel protein [Xenopus (Silurana) tropicalis]
 gi|183985907|gb|AAI66333.1| angel homolog 1 (Drosophila) [Xenopus (Silurana) tropicalis]
 gi|213624587|gb|AAI71302.1| angel homolog 1 (Drosophila) [Xenopus (Silurana) tropicalis]
          Length = 566

 Score = 35.9 bits (81), Expect = 5.7,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 24/67 (35%), Gaps = 5/67 (7%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQKSYNGVAILSK 73
           R  N+   ++    DIICLQE   +  ++       L ++ Y      +         + 
Sbjct: 172 RWPNILQELQHWEADIICLQEV--QQDHYKEHVEPSLSAIGYSCHFKRRTGRKTDGCCTC 229

Query: 74  YQPIEIV 80
           Y+    +
Sbjct: 230 YKTQRFM 236


>gi|332030472|gb|EGI70160.1| Protein angel-like protein 2 [Acromyrmex echinatior]
          Length = 554

 Score = 35.9 bits (81), Expect = 5.7,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 27/79 (34%), Gaps = 24/79 (30%)

Query: 3   VVTVATWNV----------------N----SIRARIHNLAAWIKENNPDIICLQETKTED 42
           ++ + ++N+                N    S + R   +   I E   +IICLQE   ++
Sbjct: 162 ILKLLSFNILAQNLLEDHLYLYMNHNKKALSWKTRKSLVIQEIFEAEANIICLQE--MQE 219

Query: 43  KNFPF--ETLQSLNYHIET 59
           ++        +   Y    
Sbjct: 220 EHLLDFVAPFKQHGYEYLY 238


>gi|225451140|ref|XP_002266491.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 998

 Score = 35.9 bits (81), Expect = 5.7,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 3/39 (7%)

Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
           R+D  ++S +  S    A   T PR     SDH P+++ 
Sbjct: 3   RLDRFLVSEDWESHFKGAVQCTLPR---PVSDHFPILLD 38


>gi|47225502|emb|CAG11985.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 562

 Score = 35.9 bits (81), Expect = 5.8,   Method: Composition-based stats.
 Identities = 24/213 (11%), Positives = 52/213 (24%), Gaps = 29/213 (13%)

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
           +       +  G   +   Q   ++  +       +    E  F +        N     
Sbjct: 373 YFNCTHLHAPEGEGEVRCEQLDMVIKWIGDFQAANRQPDEEVAFDVLCGDFNFDNCSPDD 432

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
                   ++D     +                   G     P  ++             
Sbjct: 433 TKEQNHRIFEDYRDPCRAGPGREKPW--------VIGTLLDQPTLYEDDVNNPESLQRTL 484

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM-----LSP 230
             E ++       +   ++     +T   +              G RID+I+     +S 
Sbjct: 485 EREDQRKMYISHPIPAENSPLVYPETDQPW-------------IGRRIDYILYRDSSVSK 531

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
              + +      T   G T   DH PV + L++
Sbjct: 532 HWRTEIEEVTFITHLAGLT---DHIPVGLRLNV 561


>gi|328779825|ref|XP_395873.4| PREDICTED: protein angel-like [Apis mellifera]
          Length = 558

 Score = 35.9 bits (81), Expect = 5.9,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 20/50 (40%), Gaps = 4/50 (8%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFET--LQSLNYHIETCGQKS 64
           R   L   I     ++ICLQE   ++++        + L Y+     + +
Sbjct: 208 RRQLLLEEILAAQANVICLQE--MQEEHLEEFLIPFKELGYNYLYKRRTN 255


>gi|302345268|ref|YP_003813621.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           melaninogenica ATCC 25845]
 gi|302149592|gb|ADK95854.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           melaninogenica ATCC 25845]
          Length = 324

 Score = 35.9 bits (81), Expect = 5.9,   Method: Composition-based stats.
 Identities = 31/258 (12%), Positives = 64/258 (24%), Gaps = 44/258 (17%)

Query: 30  PDIICLQETKTEDKNFPFET-----LQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLP 84
           PDI+ L E   E+ +  F+      L+   Y           G+ +   Y P        
Sbjct: 83  PDIVGLCEV--ENDSVLFDLTRRSLLRKARYEYVMTASNDARGIDVALLYSPFSFRLIKA 140

Query: 85  GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL 144
                +  + +  T       +      +  G+ +                    +   +
Sbjct: 141 DTIRVIPMKEMRPTRD-----ILHVEGEIESGDTLHVFLLHAPSRMGGELYSRPFRMHVM 195

Query: 145 EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL 204
           E                       + + A       Q   +   +  +  +   +     
Sbjct: 196 ERLRSAIDSLRSAYTDPKLLVMGDFNDYADS--PSLQLAYEYGLINISAGVHGRNGAKGT 253

Query: 205 YSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKP------------------- 245
           Y +   +           +D I++S    S +   RI+  P                   
Sbjct: 254 YRYHGEWGS---------LDQILVSVNLRSWVTDCRINDAPFLLEEDTKYGGVKPRRNYN 304

Query: 246 --RGWTKPSDHTPVIVSL 261
             R     SDH P+++ L
Sbjct: 305 GMRFNNGFSDHLPLVLRL 322


>gi|326521854|dbj|BAK04055.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 396

 Score = 35.9 bits (81), Expect = 6.0,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 20/52 (38%), Gaps = 13/52 (25%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGW-----------TKPSDHTPVIVSLDI 263
           +D+I LS +  + +    +   PRG              PSDH P+     +
Sbjct: 344 LDYIFLSGD--NSIKPTTLLRIPRGGSPDVEGGLPNFHHPSDHLPIGADFQL 393


>gi|188574659|ref|YP_001911588.1| nuclease [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188519111|gb|ACD57056.1| nuclease [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 572

 Score = 35.9 bits (81), Expect = 6.0,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 25/86 (29%), Gaps = 21/86 (24%)

Query: 192 TDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSAR---IDTKPR-- 246
                A       YSF D              DH +LSP     L  A    I+      
Sbjct: 494 WQDAFAVAGVKQPYSFVDDGMSGRQ-------DHALLSPAMAKQLRGAVEWHINADVMDA 546

Query: 247 ---------GWTKPSDHTPVIVSLDI 263
                    G  + SDH PV++   +
Sbjct: 547 AGYAKRNLPGPWRSSDHDPVLLGFSL 572


>gi|317496367|ref|ZP_07954721.1| endonuclease/Exonuclease/phosphatase [Gemella moribillum M424]
 gi|316913503|gb|EFV34995.1| endonuclease/Exonuclease/phosphatase [Gemella moribillum M424]
          Length = 354

 Score = 35.9 bits (81), Expect = 6.0,   Method: Composition-based stats.
 Identities = 38/270 (14%), Positives = 75/270 (27%), Gaps = 34/270 (12%)

Query: 18  IHNLAAWIKENNPDIICLQETKTE-------------DKNFPFETLQSLNYHIETCGQKS 64
           + N+   IKE   D+  LQE   +             DK     ++ + N+ +       
Sbjct: 94  LTNITRIIKEEAADVTFLQEVDVDSKRTYNINQVDYLDKALDNSSIFAYNFRVAYIPYPL 153

Query: 65  YNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTIN-TQTLRIGNLYLPHGNPIT--- 120
                + S             +   +   F   T   N  +   +    + + +      
Sbjct: 154 PPLGKVNSGIYTSTKFNIENAERYQMPIPFTFPTRLANLKRGFSVIYSNIENSDKKLVLI 213

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
           +   D      K  +    Q +E  E     G+Y ++    +     + + +   T    
Sbjct: 214 NAHLDAYDKDNKGKIAQTKQLIEFMEKEYAKGNYVLVGADFNQELRDLTKEEIEKTPAEL 273

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR------IDHIMLSPEA-T 233
              +        D  +  +D            ++    KG        ID  + S     
Sbjct: 274 WRAELFDKTLLKDKFKLYYDNSRP----SARLNNKPYEKGSNGTYEFIIDGFIASDNIEV 329

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           S +    +D   R     SDH PV +   +
Sbjct: 330 SQVK--TLDQDYRY----SDHNPVKLRFRL 353


>gi|190408129|gb|EDV11394.1| DNase [Saccharomyces cerevisiae RM11-1a]
 gi|256270016|gb|EEU05262.1| Ngl3p [Saccharomyces cerevisiae JAY291]
          Length = 506

 Score = 35.9 bits (81), Expect = 6.0,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 20/47 (42%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           R   L   +K+  PD++ LQE    + NF  E    L + +     +
Sbjct: 139 RSKVLVHELKKYRPDVVSLQEVDYNELNFWQENFHKLGFDMIFKRHE 185


>gi|226532622|ref|NP_001141499.1| hypothetical protein LOC100273611 [Zea mays]
 gi|194704824|gb|ACF86496.1| unknown [Zea mays]
          Length = 443

 Score = 35.9 bits (81), Expect = 6.1,   Method: Composition-based stats.
 Identities = 33/280 (11%), Positives = 70/280 (25%), Gaps = 51/280 (18%)

Query: 29  NPDIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDL 88
           +PD++CLQE   +        ++S  Y       +                  HL  +D 
Sbjct: 145 DPDVVCLQEV--DRFQDIAAGMKSRGYEGIFQ--RRTGDTRDGCAIFWKSKQLHLVEEDS 200

Query: 89  DVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQR------L 142
              + F             +   +      I       +       +R   +        
Sbjct: 201 IDFSEFNLRNNVAQICVFELNGTHKFVLGNIHVLFNPKRGDVKLGQIRMLLENANALAEK 260

Query: 143 ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR----QSFQKLQNMGFTDAIRAT 198
             + P++ AGD+N  P           + +             S +    +      + T
Sbjct: 261 WDKIPIVLAGDFNSTPDSAIYKFLSTMKLNISLHDRRHLSGLDSTEFGYELCSLLKYQWT 320

Query: 199 HDTHHLYSFWDY---------------YADSWSKNKGIR---------------IDHIML 228
            +     + +                      S N+G+                +D++  
Sbjct: 321 DEEVRNATGYSNVMVAEHPLKLSSSYAMLKGNSNNRGLHGEPLATSYHRKFLGTVDYLWH 380

Query: 229 SPEAT-SLLHS---ARIDTKPRG---WTKPSDHTPVIVSL 261
           +     S +       +  + RG       SDH P++   
Sbjct: 381 THGIECSRVLETLPISVLKRTRGLPTREIGSDHLPIVAEF 420


>gi|326497785|dbj|BAK05982.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 85

 Score = 35.9 bits (81), Expect = 6.1,   Method: Composition-based stats.
 Identities = 8/36 (22%), Positives = 17/36 (47%), Gaps = 2/36 (5%)

Query: 26 KENNPDIICLQETKTEDKNFP--FETLQSLNYHIET 59
          +  N D++CLQET  ++ +       +    Y+  +
Sbjct: 50 QRENFDVLCLQETHLKEGDVKDFKNLIPGYEYNYWS 85


>gi|17529698|gb|AAL40415.1|AF369891_4 endonuclease/reverse transcriptase [Branchiostoma floridae]
          Length = 1045

 Score = 35.9 bits (81), Expect = 6.1,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 25/66 (37%), Gaps = 4/66 (6%)

Query: 4   VTVATWNVN--SIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + +   NVN  S+R ++  L   I+   PDII   ET  E        +    Y      
Sbjct: 105 IRIL--NVNFQSVRGKVPELDNLIQSLRPDIILGTETWLETPEISSSEIFPTGYTKVYRK 162

Query: 62  QKSYNG 67
            ++  G
Sbjct: 163 DRNKYG 168


>gi|259148455|emb|CAY81700.1| Ngl3p [Saccharomyces cerevisiae EC1118]
          Length = 506

 Score = 35.9 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 20/47 (42%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           R   L   +K+  PD++ LQE    + NF  E    L + +     +
Sbjct: 139 RSKVLVHELKKYRPDVVSLQEVDYNELNFWQENFHKLGFDMIFKRHE 185


>gi|261251117|ref|ZP_05943691.1| metal-dependent hydrolase [Vibrio orientalis CIP 102891]
 gi|260937990|gb|EEX93978.1| metal-dependent hydrolase [Vibrio orientalis CIP 102891]
          Length = 292

 Score = 35.9 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 25/238 (10%), Positives = 57/238 (23%), Gaps = 15/238 (6%)

Query: 31  DIICLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDV 90
           DI+  QE    DK    + + S      +    + N     S            G  +  
Sbjct: 64  DILAFQEV--NDKQALTKVIGSDYQFFFSHRSNADNQRHQFSDINQYTGFAIRKGIAVKD 121

Query: 91  QARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIF 150
                      +        +  P+             +        +     L+     
Sbjct: 122 MPDIKLDRSPNSKLRFASYVMLHPNSQQPIHALSVHLKARCSGAYNGSKACRTLKVQGQQ 181

Query: 151 AGDY---NIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF 207
              +                   N +     + +   +  +      +   +        
Sbjct: 182 LNKWIKEREKNNDAYVILGDFNHNLSYNGDWLWKGISQGTDATLATKMTKANCKVK---- 237

Query: 208 WDYYADSWSKNKGIRIDHIMLSPEA---TSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
                 + +      IDHI++S +    +   +  ++D       + SDH P+ VS+ 
Sbjct: 238 -SRNNPNKTHQFKSLIDHIIVSSDLGFHSPKQNLYKVDDVL--NRQMSDHCPISVSIK 292


>gi|73964324|ref|XP_547922.2| PREDICTED: similar to angel homolog 1 [Canis familiaris]
          Length = 652

 Score = 35.9 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 29/75 (38%), Gaps = 10/75 (13%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQ 62
           +  WN      R  NL    +  +PDI+CLQE   ++ ++  +    L+ + +      +
Sbjct: 254 ILNWN-----YRFANLMQEFQHWDPDILCLQEV--QEDHYWEQLEPSLRMMGFTCFYKRR 306

Query: 63  KSYNGVAILSKYQPI 77
                      Y+P 
Sbjct: 307 TGCKTDGCAVCYKPT 321


>gi|224282153|ref|NP_056120.2| protein angel homolog 1 [Homo sapiens]
 gi|17369713|sp|Q9UNK9|ANGE1_HUMAN RecName: Full=Protein angel homolog 1
 gi|5524739|gb|AAD44362.1|AF111169_2 KIAA0759 [Homo sapiens]
 gi|52545611|emb|CAB70667.2| hypothetical protein [Homo sapiens]
 gi|119601668|gb|EAW81262.1| angel homolog 1 (Drosophila), isoform CRA_b [Homo sapiens]
 gi|119601669|gb|EAW81263.1| angel homolog 1 (Drosophila), isoform CRA_b [Homo sapiens]
 gi|168267560|dbj|BAG09836.1| angel homolog 1 [synthetic construct]
          Length = 670

 Score = 35.9 bits (81), Expect = 6.2,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 29/78 (37%), Gaps = 16/78 (20%)

Query: 6   VATWN---VNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIET 59
           +  WN   VN        L    +  +PDI+CLQE   ++ ++  +    L+ + +    
Sbjct: 272 ILNWNYRFVN--------LMQEFQHWDPDILCLQEV--QEDHYWEQLEPSLRMMGFTCFY 321

Query: 60  CGQKSYNGVAILSKYQPI 77
             +           Y+P 
Sbjct: 322 KRRTGCKTDGCAVCYKPT 339


>gi|323336135|gb|EGA77406.1| Ngl3p [Saccharomyces cerevisiae Vin13]
          Length = 506

 Score = 35.9 bits (81), Expect = 6.3,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 20/47 (42%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           R   L   +K+  PD++ LQE    + NF  E    L + +     +
Sbjct: 139 RSKVLVHELKKYRPDVVSLQEVDYNELNFWQENFHKLGFDMIFKRHE 185


>gi|194225225|ref|XP_001493083.2| PREDICTED: similar to Protein angel homolog 1 [Equus caballus]
          Length = 650

 Score = 35.9 bits (81), Expect = 6.3,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 29/75 (38%), Gaps = 10/75 (13%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQ 62
           +  WN      R  NL    +  +PDI+CLQE   ++ ++  +    L+ + +      +
Sbjct: 252 ILNWN-----YRFANLMQEFQHWDPDILCLQEV--QEDHYWEQLEPSLRMMGFTCFYKRR 304

Query: 63  KSYNGVAILSKYQPI 77
                      Y+P 
Sbjct: 305 TGCKTDGCAVCYKPT 319


>gi|20379588|gb|AAH28714.1| Angel homolog 1 (Drosophila) [Homo sapiens]
          Length = 670

 Score = 35.9 bits (81), Expect = 6.3,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 29/78 (37%), Gaps = 16/78 (20%)

Query: 6   VATWN---VNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIET 59
           +  WN   VN        L    +  +PDI+CLQE   ++ ++  +    L+ + +    
Sbjct: 272 ILNWNYRFVN--------LMQEFQHWDPDILCLQEV--QEDHYWEQLEPSLRMMGFTCFY 321

Query: 60  CGQKSYNGVAILSKYQPI 77
             +           Y+P 
Sbjct: 322 KRRTGCKTDGCAVCYKPT 339


>gi|11359908|pir||T46340 hypothetical protein DKFZp434B0814.1 - human (fragment)
 gi|3882239|dbj|BAA34479.1| KIAA0759 protein [Homo sapiens]
          Length = 673

 Score = 35.9 bits (81), Expect = 6.3,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 29/78 (37%), Gaps = 16/78 (20%)

Query: 6   VATWN---VNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIET 59
           +  WN   VN        L    +  +PDI+CLQE   ++ ++  +    L+ + +    
Sbjct: 275 ILNWNYRFVN--------LMQEFQHWDPDILCLQEV--QEDHYWEQLEPSLRMMGFTCFY 324

Query: 60  CGQKSYNGVAILSKYQPI 77
             +           Y+P 
Sbjct: 325 KRRTGCKTDGCAVCYKPT 342


>gi|282880228|ref|ZP_06288945.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           timonensis CRIS 5C-B1]
 gi|281305888|gb|EFA97931.1| endonuclease/exonuclease/phosphatase family protein [Prevotella
           timonensis CRIS 5C-B1]
          Length = 316

 Score = 35.9 bits (81), Expect = 6.4,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 21/62 (33%), Gaps = 21/62 (33%)

Query: 223 IDHIMLSPEATSLLHSARIDTKP---------------------RGWTKPSDHTPVIVSL 261
           +DHI L   + +L+    +   P                     R     SDH P+++ +
Sbjct: 253 LDHIFLDKSSAALVQECYVHDAPFLLEKDEKYGGVKPRRNYQGPRYLNGFSDHLPLVMRI 312

Query: 262 DI 263
           + 
Sbjct: 313 NW 314


>gi|147807236|emb|CAN66193.1| hypothetical protein VITISV_013311 [Vitis vinifera]
          Length = 1222

 Score = 35.9 bits (81), Expect = 6.4,   Method: Composition-based stats.
 Identities = 7/59 (11%), Positives = 22/59 (37%), Gaps = 7/59 (11%)

Query: 201 THHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
               +++    +   +     R+D  +++ +   +        + R     SDH P+++
Sbjct: 335 QGGAFTW----SGGRNNQSWXRLDRFLVTQQWLEMFSGIA---QCRLQRPTSDHFPILL 386


>gi|323347254|gb|EGA81528.1| Ngl3p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 503

 Score = 35.9 bits (81), Expect = 6.4,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 20/47 (42%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           R   L   +K+  PD++ LQE    + NF  E    L + +     +
Sbjct: 139 RSKVLVHELKKYRPDVVSLQEVDYNELNFWQENFHKLGFDMIFKRHE 185


>gi|222617844|gb|EEE53976.1| hypothetical protein OsJ_00596 [Oryza sativa Japonica Group]
          Length = 1066

 Score = 35.9 bits (81), Expect = 6.4,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 50/152 (32%), Gaps = 10/152 (6%)

Query: 114 PHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDA 173
            +   I     D+      R      +    E   ++     I       +  +   N+A
Sbjct: 473 YNFRYIDVLIKDESCPVQWRCTFVYGEPKASERHNMWTLLRRIKSNSTAPWCLVGDFNEA 532

Query: 174 CFTLEVR--QSFQKLQNMGFTDAIRATHDTHHLYS---F-WDYYADSWSKNKGIRIDHIM 227
            +  E       ++ Q M F + +         ++   + +D        N  +R+D  +
Sbjct: 533 MWQFEHFSDHKRREKQIMDFREVLSHCDVFDLGFTGAPWTFDNKQKGR-NNVRVRLDRAV 591

Query: 228 LSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
            S   +SL  +A +          SDH+P+++
Sbjct: 592 ASQSWSSLFPAAEV---IHLTVSSSDHSPILL 620


>gi|302808860|ref|XP_002986124.1| hypothetical protein SELMODRAFT_425096 [Selaginella moellendorffii]
 gi|300146272|gb|EFJ12943.1| hypothetical protein SELMODRAFT_425096 [Selaginella moellendorffii]
          Length = 1035

 Score = 35.9 bits (81), Expect = 6.5,   Method: Composition-based stats.
 Identities = 22/127 (17%), Positives = 38/127 (29%), Gaps = 7/127 (5%)

Query: 148 LIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF 207
            I AGD+N +    D    II +           SF           I         +++
Sbjct: 754 WILAGDFNFVDHEEDKQGGIIQDRRTRAERLAWNSFLLQIGTCDAYEIPGFVTHEPRFTW 813

Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPR 267
            +       +    R+D   L+ +         ID         SDH P+ ++L     R
Sbjct: 814 RERQRRGIQR----RLDRFYLTMDLCMQGGKLDIDNTYTD---FSDHHPIRLTLPFRRSR 866

Query: 268 KKQQDST 274
             ++   
Sbjct: 867 GPRKPVA 873


>gi|188576654|ref|YP_001913583.1| hypothetical protein PXO_00879 [Xanthomonas oryzae pv. oryzae
           PXO99A]
 gi|188521106|gb|ACD59051.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
           PXO99A]
          Length = 525

 Score = 35.9 bits (81), Expect = 6.5,   Method: Composition-based stats.
 Identities = 26/205 (12%), Positives = 58/205 (28%), Gaps = 19/205 (9%)

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL------R 107
            ++      +  N      +   ++    + G          E       + +      R
Sbjct: 133 GFYYHFLDMQQGNRYDSWVELSSVDTALLMMGVLFTQSYYDGEDPREKEIRQIADTLYKR 192

Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167
           +   +L    P+ S  +  +  +I       ++ + L    + +  + + P     +   
Sbjct: 193 VDWRWLQPRAPLISMGWFPESGFINHDWMGYNEAMMLYILALGSPTHGVDPDAWTSWTRT 252

Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227
              +   +  +   SF  L    ++       D    Y           + +G  ID+ +
Sbjct: 253 YNNDWGVYQGQEYLSFGPLFGHQYSHVWIDFRDIQDQY----------MRERG--IDYFL 300

Query: 228 LSPEATSLLHSARIDTKPRGWTKPS 252
            S  AT       ID  P  W   S
Sbjct: 301 NSRRATLAQRDYAID-NPMKWKDYS 324


>gi|147854690|emb|CAN80237.1| hypothetical protein VITISV_036283 [Vitis vinifera]
          Length = 756

 Score = 35.9 bits (81), Expect = 6.5,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 19/39 (48%), Gaps = 3/39 (7%)

Query: 222 RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
           R+D  ++S +  +    A   + PR     SDH P+++ 
Sbjct: 610 RLDRFLISEDWENHFSGASQCSLPR---PVSDHFPILLD 645


>gi|57164482|gb|AAW34241.1| putative inositol polyphosphate 5-phosphatase [Oryza sativa
           Japonica Group]
 gi|108709919|gb|ABF97714.1| Type I inositol-1,4,5-trisphosphate 5-phosphatase 11, putative,
           expressed [Oryza sativa Japonica Group]
          Length = 335

 Score = 35.9 bits (81), Expect = 6.5,   Method: Composition-based stats.
 Identities = 43/281 (15%), Positives = 79/281 (28%), Gaps = 33/281 (11%)

Query: 6   VATWNVNSIRARIHNLAAWIKEN-NPD--IICLQET-KTEDKNFPFETLQSLNYHIETCG 61
           + TWN+N  +  + ++   +  N   D  +  LQE  K +      ET+   +  +    
Sbjct: 54  IITWNMNG-KMSVEDVTKLVSSNRKFDLLVFGLQEVPKCDVAQVLQETMAETHILLCQKT 112

Query: 62  QKSYNGVAILSKYQPIEIVT---------HLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
            +S       +K     I              G     +            + + +    
Sbjct: 113 MQSLQMFLFGAKSSEKYIRELKVDKHAVGGCGGIIGRKKGAVAMYINFSGIRMVFVSCHL 172

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHD--------CY 164
             H N +     + +      F +   Q  +  +  ++ GD N   Q             
Sbjct: 173 AAHENKVEKRNSECQHISHSLFSKNDIQYTKSADITVWLGDLNYRLQGISSIPARKLIEE 232

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI- 223
           N            E  +          T   + T+  +   S +D        +   RI 
Sbjct: 233 NRQSLRGKDQLLQEAEKGEVFNGYCEGTLLFKPTYKYNIGSSNYDTSYKIRVPSWTDRIL 292

Query: 224 ---DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
              DH   +    ++L+S       R     SDH PV   L
Sbjct: 293 FKVDH---TSGLDAVLNSYEALDCIRS----SDHKPVRAHL 326


>gi|167518073|ref|XP_001743377.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778476|gb|EDQ92091.1| predicted protein [Monosiga brevicollis MX1]
          Length = 367

 Score = 35.9 bits (81), Expect = 6.6,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 10/43 (23%)

Query: 4   VTVAT---WNVN------SIRARIHNLAAWIKENNPDIICLQE 37
           + + +   WNVN       ++ R+  L + I E NPD+I  QE
Sbjct: 193 LKLVSYNIWNVNKFQDDPYLK-RMERLTSEIHEANPDVIAFQE 234


>gi|327537765|gb|EGF24470.1| hypothetical protein RBWH47_04462 [Rhodopirellula baltica WH47]
          Length = 58

 Score = 35.9 bits (81), Expect = 6.7,   Method: Composition-based stats.
 Identities = 9/50 (18%), Positives = 27/50 (54%), Gaps = 6/50 (12%)

Query: 214 SWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
           + + N+  ++D++ + P  +  +  + +  +P      SDH P++V +++
Sbjct: 6   ARTPNR--QLDYVAMYPANSWRIVESEVLDEP----VASDHRPLLVEVEL 49


>gi|301757849|ref|XP_002914778.1| PREDICTED: protein angel homolog 1-like [Ailuropoda melanoleuca]
          Length = 675

 Score = 35.9 bits (81), Expect = 6.7,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 29/75 (38%), Gaps = 10/75 (13%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQ 62
           +  WN      R  NL    +  +PDI+CLQE   ++ ++  +    L+ + +      +
Sbjct: 277 ILNWN-----YRFANLMQEFQHWDPDILCLQEV--QEDHYWEQLEPSLRMMGFTCFYKRR 329

Query: 63  KSYNGVAILSKYQPI 77
                      Y+P 
Sbjct: 330 TGCKTDGCAVCYKPT 344


>gi|288801511|ref|ZP_06406963.1| endonuclease/Exonuclease/phosphatase [Prevotella sp. oral taxon 299
           str. F0039]
 gi|288331592|gb|EFC70078.1| endonuclease/Exonuclease/phosphatase [Prevotella sp. oral taxon 299
           str. F0039]
          Length = 314

 Score = 35.9 bits (81), Expect = 6.7,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 19/61 (31%), Gaps = 21/61 (34%)

Query: 223 IDHIMLSPEATSLLHSARI--------DTKPRGWTKP-------------SDHTPVIVSL 261
           +DHI +S           I        + +  G  +P             SDH P++   
Sbjct: 252 LDHIFVSEPLRKYWLDCFINDADFLLCNDEKYGGKQPFRCYIGAKYHEGYSDHLPLVAHF 311

Query: 262 D 262
           +
Sbjct: 312 E 312


>gi|116179164|ref|XP_001219431.1| predicted protein [Chaetomium globosum CBS 148.51]
 gi|88184507|gb|EAQ91975.1| predicted protein [Chaetomium globosum CBS 148.51]
          Length = 593

 Score = 35.9 bits (81), Expect = 6.7,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 14/40 (35%), Gaps = 4/40 (10%)

Query: 223 IDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
           ID ++ S +    L    I          SDH  +  + D
Sbjct: 415 IDLVLASADLADQLLRCTIHP----CDHGSDHRAIETAFD 450


>gi|281351455|gb|EFB27039.1| hypothetical protein PANDA_002696 [Ailuropoda melanoleuca]
          Length = 646

 Score = 35.9 bits (81), Expect = 6.8,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 29/75 (38%), Gaps = 10/75 (13%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQ 62
           +  WN      R  NL    +  +PDI+CLQE   ++ ++  +    L+ + +      +
Sbjct: 248 ILNWN-----YRFANLMQEFQHWDPDILCLQEV--QEDHYWEQLEPSLRMMGFTCFYKRR 300

Query: 63  KSYNGVAILSKYQPI 77
                      Y+P 
Sbjct: 301 TGCKTDGCAVCYKPT 315


>gi|223935015|ref|ZP_03626934.1| hypothetical protein Cflav_PD5545 [bacterium Ellin514]
 gi|223896468|gb|EEF62910.1| hypothetical protein Cflav_PD5545 [bacterium Ellin514]
          Length = 541

 Score = 35.9 bits (81), Expect = 6.8,   Method: Composition-based stats.
 Identities = 14/142 (9%), Positives = 33/142 (23%), Gaps = 1/142 (0%)

Query: 85  GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLEL 144
                V   + + +   +   +            +T   +             A    + 
Sbjct: 164 NPPAQVNYFYNDLSPYGSWVQVDGFGWCWQPRTVVTVHGWRPYCDGGHWVNTDAGWYWQS 223

Query: 145 EEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHL 204
           +    +A  +      H+    +   +       V     +           A  D    
Sbjct: 224 DYSWGWATFHYGRWHLHERCGWVWIPDTVWAPAWVTWRADEGHCGWAPLPPHADFDIRLG 283

Query: 205 YSFWDYYADSWSKNKGIRIDHI 226
           Y F      +   + G+R+DH 
Sbjct: 284 YRFNGVSVRA-DFDFGLRLDHF 304


>gi|55167960|gb|AAV43829.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|55168037|gb|AAV43905.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 796

 Score = 35.9 bits (81), Expect = 6.8,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 48/175 (27%), Gaps = 18/175 (10%)

Query: 85  GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY--DDKISWIKRFLRFASQRL 142
           G  L           + N + + +            +  Y        +K +      + 
Sbjct: 395 GIALFWDESIKVELKSYNVRHIDVLITESDGERWRGTFVYGEPRSQDRLKMWTLLRRIKS 454

Query: 143 ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH 202
               P +  GD+N      + ++ +              +   L ++GF           
Sbjct: 455 NAALPWLMIGDFNEAMWQSEHWSRVRRSERQMKDFREALADCDLHDLGFHGVP------- 507

Query: 203 HLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTP 256
                W Y  +   + N  +R+D  + SP        A I       T  SDH P
Sbjct: 508 -----WTYDNNQRGANNVRVRLDRAVASPAWLGRFRQASITHLV---TPSSDHVP 554


>gi|37654314|gb|AAQ96262.1| LRRGT00049 [Rattus norvegicus]
          Length = 898

 Score = 35.9 bits (81), Expect = 6.8,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 24/69 (34%), Gaps = 10/69 (14%)

Query: 186 LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKP 245
           +  M  TD  R  +     Y+F+     ++SK     IDHI+      +      I    
Sbjct: 668 MSQMDLTDIYRTFYPKAKGYTFFSAPHGTFSK-----IDHIIGQKTGLNRYRKIEIIPCV 722

Query: 246 RGWTKPSDH 254
                 SDH
Sbjct: 723 L-----SDH 726


>gi|242039321|ref|XP_002467055.1| hypothetical protein SORBIDRAFT_01g018876 [Sorghum bicolor]
 gi|241920909|gb|EER94053.1| hypothetical protein SORBIDRAFT_01g018876 [Sorghum bicolor]
          Length = 477

 Score = 35.9 bits (81), Expect = 6.8,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 9/57 (15%)

Query: 204 LYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
            +++      +  KN  + ++D ++ S E  S   +    TK R     SDH P+I+
Sbjct: 247 RFTW-----SNKQKNPIMVKLDRVLASEEWESKFPTCFAWTKAR---IGSDHCPIIL 295


>gi|114654101|ref|XP_001163194.1| PREDICTED: angel homolog 1 isoform 3 [Pan troglodytes]
          Length = 670

 Score = 35.9 bits (81), Expect = 6.8,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 29/78 (37%), Gaps = 16/78 (20%)

Query: 6   VATWN---VNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIET 59
           +  WN   VN        L    +  +PDI+CLQE   ++ ++  +    L+ + +    
Sbjct: 272 ILNWNYRFVN--------LMQEFQHWDPDILCLQEV--QEDHYWEQLEPSLRMMGFTCFY 321

Query: 60  CGQKSYNGVAILSKYQPI 77
             +           Y+P 
Sbjct: 322 KRRTGCKTDGCAVCYKPT 339


>gi|323352922|gb|EGA85222.1| Ngl3p [Saccharomyces cerevisiae VL3]
          Length = 506

 Score = 35.9 bits (81), Expect = 6.9,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 20/47 (42%)

Query: 17  RIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
           R   L   +K+  PD++ LQE    + NF  E    L + +     +
Sbjct: 139 RSKVLVHELKKYRPDVVSLQEVDYNELNFWQENFHKLGFDMIFKRHE 185


>gi|222635572|gb|EEE65704.1| hypothetical protein OsJ_21338 [Oryza sativa Japonica Group]
          Length = 901

 Score = 35.9 bits (81), Expect = 6.9,   Method: Composition-based stats.
 Identities = 19/118 (16%), Positives = 39/118 (33%), Gaps = 4/118 (3%)

Query: 144 LEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHH 203
                  +   N+       +N  +W+ +     +  +S  +       D          
Sbjct: 660 WTALRNISQTSNLPWLVMGDFNETMWQFEHFSRTQRNESQMQAFRDVLQDCELHDLGFQG 719

Query: 204 LYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
           +   +D   D W  N  +R+D  + +     +  SA+I       +  SDH  V++ L
Sbjct: 720 VPHTYDNRRDGW-NNVKVRLDRAVANNGWRDIFPSAQIVHLV---SPCSDHCSVLLKL 773


>gi|58581792|ref|YP_200808.1| hypothetical protein XOO2169 [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|58426386|gb|AAW75423.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
           KACC10331]
          Length = 539

 Score = 35.9 bits (81), Expect = 6.9,   Method: Composition-based stats.
 Identities = 26/205 (12%), Positives = 58/205 (28%), Gaps = 19/205 (9%)

Query: 54  NYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTL------R 107
            ++      +  N      +   ++    + G          E       + +      R
Sbjct: 147 GFYYHFLDMQQGNRYDSWVELSSVDTALLMMGVLFTQSYYDGEDPREKEIRQIADTLYKR 206

Query: 108 IGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPI 167
           +   +L    P+ S  +  +  +I       ++ + L    + +  + + P     +   
Sbjct: 207 VDWRWLQPRAPLISMGWFPESGFINHDWMGYNEAMMLYILALGSPTHGVDPDAWTSWTRT 266

Query: 168 IWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIM 227
              +   +  +   SF  L    ++       D    Y           + +G  ID+ +
Sbjct: 267 YNNDWGVYQGQEYLSFGPLFGHQYSHVWIDFRDIQDQY----------MRERG--IDYFL 314

Query: 228 LSPEATSLLHSARIDTKPRGWTKPS 252
            S  AT       ID  P  W   S
Sbjct: 315 NSRRATLAQRDYAID-NPMKWKDYS 338


>gi|147825435|emb|CAN77770.1| hypothetical protein VITISV_044337 [Vitis vinifera]
          Length = 729

 Score = 35.9 bits (81), Expect = 6.9,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 17/45 (37%), Gaps = 4/45 (8%)

Query: 217 KNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
            N+   R+D  ++ P             + R     SDH PV++ 
Sbjct: 165 NNQSWARLDRFLVPPSWLDHFSGVL---QSRLPRPISDHFPVLLE 206


>gi|34392572|dbj|BAC82617.1| pol-like protein [Danio rerio]
          Length = 1279

 Score = 35.9 bits (81), Expect = 6.9,   Method: Composition-based stats.
 Identities = 40/278 (14%), Positives = 89/278 (32%), Gaps = 45/278 (16%)

Query: 1   MSVVTVATWNVNSI---RARIHNLAAWIKENNPDIICLQET--KTEDKNFPFETLQSLNY 55
           + V+   ++N   +   R +  N+    K     II LQET  K E  +   +      Y
Sbjct: 11  LMVLNCVSFNARGLMDLR-KFKNVKEKCKREE--IIILQETNWKNEVMDIYKKEWDGDFY 67

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
           +              ++       +        D Q + +        + + + N++ P+
Sbjct: 68  YSN----GDTKAGRGVAILIKKNALQMSKVIYKDKQGKCMILEIKYEGKDIILVNVHAPN 123

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
                 + ++              + L+  + +I  GD+N +    D    +++++D   
Sbjct: 124 EESEKKSFFNI-----------LRRFLKNYKQIIVCGDFNTVFSRQDITEGMVFKSDTGR 172

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG-----IRIDHIMLSP 230
                     ++  G  D  R  +     +S          +  G      RID+++ + 
Sbjct: 173 KE----LKSLIEEKGMIDIWRERNGKKKEFS--------RRQIVGNFVNQSRIDYVLCTR 220

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPRK 268
                +   R D         SDH  V  + +  E ++
Sbjct: 221 NIEIYIEKIRYDETVL-----SDHKFVFFNFNTEEIQR 253


>gi|296215581|ref|XP_002754191.1| PREDICTED: protein angel homolog 1 [Callithrix jacchus]
          Length = 663

 Score = 35.9 bits (81), Expect = 7.0,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 29/78 (37%), Gaps = 16/78 (20%)

Query: 6   VATWN---VNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIET 59
           +  WN   VN        L    +  +PDI+CLQE   ++ ++  +    L+ + +    
Sbjct: 265 ILNWNYRFVN--------LMQEFQHWDPDILCLQEV--QEDHYWEQLEPSLRMMGFTCFY 314

Query: 60  CGQKSYNGVAILSKYQPI 77
             +           Y+P 
Sbjct: 315 KRRTGCKTDGCAVCYKPT 332


>gi|222631150|gb|EEE63282.1| hypothetical protein OsJ_18092 [Oryza sativa Japonica Group]
          Length = 763

 Score = 35.9 bits (81), Expect = 7.0,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 48/175 (27%), Gaps = 18/175 (10%)

Query: 85  GDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKY--DDKISWIKRFLRFASQRL 142
           G  L           + N + + +            +  Y        +K +      + 
Sbjct: 362 GIALFWDESIKVELKSYNVRHIDVLITESDGERWRGTFVYGEPRSQDRLKMWTLLRRIKS 421

Query: 143 ELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTH 202
               P +  GD+N      + ++ +              +   L ++GF           
Sbjct: 422 NAALPWLMIGDFNEAMWQSEHWSRVRRSERQMKDFREALADCDLHDLGFHGVP------- 474

Query: 203 HLYSFWDYYADSW-SKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTP 256
                W Y  +   + N  +R+D  + SP        A I       T  SDH P
Sbjct: 475 -----WTYDNNQRGANNVRVRLDRAVASPAWLGRFRQASITHLV---TPSSDHVP 521


>gi|307194526|gb|EFN76818.1| Synaptojanin-1 [Harpegnathos saltator]
          Length = 1172

 Score = 35.9 bits (81), Expect = 7.1,   Method: Composition-based stats.
 Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 4/29 (13%)

Query: 246 RGWTKPSDHTPVIVSLDIP----EPRKKQ 270
           R   K SDH PVI ++DI     +P K++
Sbjct: 834 RAELKQSDHRPVIATIDIDVHCVDPEKRE 862


>gi|290242949|ref|YP_003494619.1| Endonuclease/exonuclease/phosphatase [Thioalkalivibrio sp. K90mix]
 gi|288945454|gb|ADC73152.1| Endonuclease/exonuclease/phosphatase [Thioalkalivibrio sp. K90mix]
          Length = 361

 Score = 35.9 bits (81), Expect = 7.1,   Method: Composition-based stats.
 Identities = 32/278 (11%), Positives = 61/278 (21%), Gaps = 35/278 (12%)

Query: 1   MSVVTVATWNVN--SIR--------ARIHNLAAWIKENNPDIICLQETKTEDKNF----- 45
           ++ + +A+WN+              ARI            D + +QE     +       
Sbjct: 23  LADLRLASWNIQHLGWNVGKDYPAVARI--------AAQFDFLAIQEV-MNAEGIYRLRD 73

Query: 46  PFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQT 105
             E      + +        N       +   E      G  L              +  
Sbjct: 74  TLEDATGAEWSVLYSDALGRNTYREKYAFLWREAAVEYVGGALTYIDEADRFAREPFSAV 133

Query: 106 LRIGNL-YLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCY 164
            R            +  T  D     ++           L + +       I+    +  
Sbjct: 134 FRSRGTDQHFLAATVHITYGDRVADRVEEIEALRRYWDWLADVMPEYAGERILFGDFNLP 193

Query: 165 NPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRID 224
                        E   +                +D      +          + G    
Sbjct: 194 PHHDGWASMRAVAEPLVTEGATTLSTHDRRYANLYDNL----WVPKDHTLPLGDAG---- 245

Query: 225 HIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD 262
            I+  P   S +     D +     + SDH PV V  +
Sbjct: 246 -ILPFPVVLSEVTGVYWDHEK-ARDRVSDHAPVYVLFE 281


>gi|224126187|ref|XP_002329612.1| predicted protein [Populus trichocarpa]
 gi|222870351|gb|EEF07482.1| predicted protein [Populus trichocarpa]
          Length = 1046

 Score = 35.9 bits (81), Expect = 7.2,   Method: Composition-based stats.
 Identities = 34/261 (13%), Positives = 77/261 (29%), Gaps = 34/261 (13%)

Query: 4   VTVATWNVNSIRARIHN--LAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCG 61
           + +  WN+  +   I +  L   I +    +  L ET+ +DKN                 
Sbjct: 455 MIIGCWNIRGLNDPIKHSELHRLIHQERITLFGLVETRVKDKNKD-----------NVSQ 503

Query: 62  QKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITS 121
               +   + +          +  +   V+      +      ++ I    +     I  
Sbjct: 504 LLLRSWSFLYNYDFSCRGRIWVCWNADTVKVDVFGMSDEAIHVSVTILATNISFNTSIIY 563

Query: 122 TKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQ 181
              +  +         +        P I  GD+N I                   L+   
Sbjct: 564 GDNNASLREALWSDIVSRSDGWESTPWILMGDFNAIRNQSGRLGGSTTWAGTMDRLDTCI 623

Query: 182 SFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIR-IDHIMLSP--EATSLLHS 238
              K+ ++ ++            Y++    ++   +N  +R +D ++++        L  
Sbjct: 624 REAKVDDLRYSGMH---------YTW----SNQCPENLIMRTLDRVLVNEKWNLNFPLSK 670

Query: 239 ARIDTKPRGWTKPSDHTPVIV 259
           AR           SDH+P++V
Sbjct: 671 ARFLPSGM-----SDHSPMVV 686


>gi|240960473|ref|XP_002400551.1| conserved hypothetical protein [Ixodes scapularis]
 gi|215490694|gb|EEC00337.1| conserved hypothetical protein [Ixodes scapularis]
          Length = 699

 Score = 35.9 bits (81), Expect = 7.2,   Method: Composition-based stats.
 Identities = 40/297 (13%), Positives = 80/297 (26%), Gaps = 57/297 (19%)

Query: 2   SVVT-----VATWNV--NS----IRARIHNLAAWIKENNPDI--ICLQETKTEDKNFPFE 48
            ++      + TWNV        +R+ +      I E  PD+  I  QE     +N   +
Sbjct: 12  KMLRDFRVYIMTWNVVCRGPIEDLRSALGLEPPVIPEALPDMYAIGFQEVSARPQNLLSQ 71

Query: 49  TLQSLNY--------HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFT 100
                 +        H  +  +       IL+ +   E + HL G         +   + 
Sbjct: 72  AFFEEPWIQAIRNALHKYSYVKHVRLQGLILTIFTKREHLIHLRGIQSTYTRTGLGGVWG 131

Query: 101 INTQ-----TLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYN 155
                     +   ++   + +         +       +    + ++ +   I   DY 
Sbjct: 132 NKGGVTIRLCVYGCSMCFVNSHLAAHESETFQRVTEYNIIIEKQRFVDAQATNILTHDYA 191

Query: 156 IIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHD--THHLYSFWDYYAD 213
                 +         +   ++E     Q LQ         +  D       +F  +   
Sbjct: 192 FWFGDLNFRVDDCTMEEMKASIENGTFDQMLQKDQLMLTALSAIDLTVDVDCTFCSHRKP 251

Query: 214 SWSKNKGIR----------ID---HIMLSPEATSLLHSARIDTKPRGWTKPSDHTPV 257
           +W+     R          +D   H  +S +         I          SDH PV
Sbjct: 252 AWTDRILFRFTKNAYENVALDLKQHQYVSHDL-------YIQ---------SDHKPV 292


>gi|195174832|ref|XP_002028174.1| GL16263 [Drosophila persimilis]
 gi|194116644|gb|EDW38687.1| GL16263 [Drosophila persimilis]
          Length = 1426

 Score = 35.9 bits (81), Expect = 7.2,   Method: Composition-based stats.
 Identities = 15/170 (8%), Positives = 31/170 (18%), Gaps = 1/170 (0%)

Query: 34   CLQETKTEDKNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQAR 93
            CL ETK ++     + ++S     +      +    I       E      G +      
Sbjct: 964  CLGETKCQNNATCIDGVESYRCECQPGFSGEFCDTKIQFCSPDCECQAGFHGTNCTDNID 1023

Query: 94   FIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGD 153
              +     N  T  I  +                       + +                
Sbjct: 1024 DCQNHMCQNGGTC-IDGINDYVCKCPDDFTGKYCEGHNMISMMYPQTSPCQNHECKHGVC 1082

Query: 154  YNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHH 203
            +       D            +   +        N         T    +
Sbjct: 1083 FQPNAAGSDYLCKCHPGYTGKWCEYLTSISFVHNNSFVELEPLRTRPEAN 1132


>gi|110633268|ref|YP_673476.1| endonuclease/exonuclease/phosphatase [Mesorhizobium sp. BNC1]
 gi|110284252|gb|ABG62311.1| Endonuclease/exonuclease/phosphatase [Chelativorans sp. BNC1]
          Length = 335

 Score = 35.5 bits (80), Expect = 7.3,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 24/56 (42%), Gaps = 8/56 (14%)

Query: 216 SKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLD-IPEPRKKQ 270
            +  G+ ID+I +            +    R  +  SDH P++V    +P P+++ 
Sbjct: 281 RRTAGLPIDNIFVKGRVA-------VLQTKRLESVGSDHLPLLVEFSLLPGPQQEP 329


>gi|320592218|gb|EFX04657.1| sphingomyelinase family [Grosmannia clavigera kw1407]
          Length = 1091

 Score = 35.5 bits (80), Expect = 7.5,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 21/70 (30%), Gaps = 16/70 (22%)

Query: 220 GIRIDHIM--LSPEATSLLHSARIDT--------------KPRGWTKPSDHTPVIVSLDI 263
           G R+D+I    SP       S+ I                 P      SDH  V  +L +
Sbjct: 903 GKRLDYIFYMSSPPIPPNADSSSIYHSWTVKTARVAMVEPHPTLGCSVSDHFAVEATLAL 962

Query: 264 PEPRKKQQDS 273
               +    S
Sbjct: 963 EFNSQDSDAS 972


>gi|146181039|ref|XP_001022028.2| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena
          thermophila]
 gi|146144304|gb|EAS01783.2| Endonuclease/Exonuclease/phosphatase family protein [Tetrahymena
          thermophila SB210]
          Length = 449

 Score = 35.5 bits (80), Expect = 7.5,   Method: Composition-based stats.
 Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 5/30 (16%)

Query: 9  WNVNSIRARIHNLAAWIKENNPDIICLQET 38
          WN     AR+  L   IK  +P I+CLQET
Sbjct: 75 WN-----ARLDLLIKEIKFVDPTILCLQET 99


>gi|148670957|gb|EDL02904.1| angel homolog 1 (Drosophila) [Mus musculus]
          Length = 674

 Score = 35.5 bits (80), Expect = 7.9,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 29/75 (38%), Gaps = 10/75 (13%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQ 62
           +  WN      R  NL    +  +PDI+CLQE   ++ ++  +    L+ + +      +
Sbjct: 276 ILNWN-----YRFANLMQEFQHWDPDILCLQEV--QEDHYWEQLEPSLRMMGFTCFYKRR 328

Query: 63  KSYNGVAILSKYQPI 77
                      Y+P 
Sbjct: 329 TGCKTDGCAVCYKPT 343


>gi|195977910|ref|YP_002123154.1| extracellular nuclease [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|195974615|gb|ACG62141.1| extracellular nuclease [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
          Length = 926

 Score = 35.5 bits (80), Expect = 7.9,   Method: Composition-based stats.
 Identities = 14/92 (15%), Positives = 32/92 (34%), Gaps = 11/92 (11%)

Query: 192 TDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWT-- 249
              + + H+    YS++ Y  ++ +      +D++++S           +          
Sbjct: 793 MANLVSRHELSDRYSYF-YRGNNQT------LDNMLVSRNLLGRYEFDMVHVNSPFMEAH 845

Query: 250 -KPSDHTPVIVSLDIPEPRKKQQDSTSQNMKP 280
            + SDH P+++ L      K    S      P
Sbjct: 846 GRASDHDPLLLQLSF-GKDKPGAPSAQPKKTP 876


>gi|148223125|ref|NP_001090759.1| contactin associated protein 1 [Xenopus (Silurana) tropicalis]
 gi|124481572|gb|AAI33056.1| LOC100037844 protein [Xenopus (Silurana) tropicalis]
          Length = 1326

 Score = 35.5 bits (80), Expect = 7.9,   Method: Composition-based stats.
 Identities = 23/206 (11%), Positives = 39/206 (18%), Gaps = 11/206 (5%)

Query: 64  SYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTK 123
            + G    S      I                +        + +    Y    +     K
Sbjct: 556 EHGGRCYQSWDDFFCICDMTGYKGETCHKSLFKENCDAYRVSGKYSGNYTIDPDGSGPMK 615

Query: 124 YDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSF 183
                  I     +     +        G     P   +         +        +  
Sbjct: 616 PFYVHCDISEERAWTIVHHDRYYATRVTGSSPDQPFLGEVNYWNATWGEVSALANGSEYC 675

Query: 184 QKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKG------IR----IDHIMLSPEAT 233
           ++        +          YSFW    +      G       R    ID     P+  
Sbjct: 676 EQRIEFSCYRSRLLNTPNGLPYSFWMGRNNERHFYWGGSSPGIQRCGCGIDKSCADPKLF 735

Query: 234 SLLH-SARIDTKPRGWTKPSDHTPVI 258
                        +G  K  DH PV 
Sbjct: 736 CNCDGDYTQWKYDKGLLKFRDHLPVT 761


>gi|160893950|ref|ZP_02074729.1| hypothetical protein CLOL250_01505 [Clostridium sp. L2-50]
 gi|156864328|gb|EDO57759.1| hypothetical protein CLOL250_01505 [Clostridium sp. L2-50]
          Length = 252

 Score = 35.5 bits (80), Expect = 8.0,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 21/45 (46%), Gaps = 2/45 (4%)

Query: 216 SKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
           +K +G R+D+ + S    + + +  ID  P       DH  VI+ 
Sbjct: 208 AKYRG-RLDYAIASEAVYASISNMEIDPMPMDCGMT-DHAAVIID 250


>gi|147771264|emb|CAN72019.1| hypothetical protein VITISV_001842 [Vitis vinifera]
          Length = 590

 Score = 35.5 bits (80), Expect = 8.2,   Method: Composition-based stats.
 Identities = 10/58 (17%), Positives = 24/58 (41%), Gaps = 7/58 (12%)

Query: 203 HLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVS 260
             +++      + +     R+DH ++S +      +    + PR     SDH P+++ 
Sbjct: 283 GPFTW----IGALNSQAAFRLDHFLISDQWEDHFSAITQSSLPR---MVSDHNPIVLE 333


>gi|238923041|ref|YP_002936554.1| hypothetical protein EUBREC_0631 [Eubacterium rectale ATCC 33656]
 gi|238874713|gb|ACR74420.1| Hypothetical protein EUBREC_0631 [Eubacterium rectale ATCC 33656]
          Length = 263

 Score = 35.5 bits (80), Expect = 8.3,   Method: Composition-based stats.
 Identities = 30/281 (10%), Positives = 72/281 (25%), Gaps = 39/281 (13%)

Query: 4   VTVATWN------VNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYHI 57
           + +  WN      +NS       +   + +N  D++ L E            +  LN ++
Sbjct: 1   MRILFWNTHRNVDINSY------ILDIVNQNEIDVLVLAEY--------MAEINELNDNL 46

Query: 58  ETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGN 117
           + C ++ +N      +   I             +   ++                L   +
Sbjct: 47  KQCKKRLFNWNTKGCERIHIWGNYIDVTPGEQNKYFSVQIVNKQYIMCGVHMYSNLNGEH 106

Query: 118 PITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGD--YNIIPQPHDCYNPIIWENDACF 175
                   ++I +  + ++   Q   +                     +     +     
Sbjct: 107 YDERVALAEEIMYSIKHIKQRLQTEHVIVIGDINESPYEKACLSAKGFHALPALQILDKG 166

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATS 234
           +  V     +       +           Y    Y  +S   N     +D +++S     
Sbjct: 167 SRTVYGKEYEKMYNPMWNLFGDFKYPPGTY----YRVESKLYNPCWFMLDQVIISQSMIP 222

Query: 235 -----------LLHSARIDTKPRG-WTKPSDHTPVIVSLDI 263
                            + T  R   +  SDH P++   +I
Sbjct: 223 LMVKEQLKIITKCGKGVLYTDNRYPNSNISDHFPIMCEFNI 263


>gi|308504709|ref|XP_003114538.1| hypothetical protein CRE_27203 [Caenorhabditis remanei]
 gi|308261923|gb|EFP05876.1| hypothetical protein CRE_27203 [Caenorhabditis remanei]
          Length = 317

 Score = 35.5 bits (80), Expect = 8.4,   Method: Composition-based stats.
 Identities = 35/298 (11%), Positives = 74/298 (24%), Gaps = 53/298 (17%)

Query: 4   VTVATWNV--------NSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNY 55
           + + T+N+        N  +    ++       NPD++ LQE      N        L +
Sbjct: 30  IRLMTFNIWQSGANVENGQQKIAKHILMV----NPDVVALQEVYA---NVTRNLTLMLGH 82

Query: 56  -HIETCGQKSYNGVAILSKY---------------QPIEIVTHLPGDDLDVQARFIEATF 99
             +       Y   AIL+++                 I + T        +   +     
Sbjct: 83  PWVAVDRNHEYPDTAILTRHVVVPNTNLSTSGGVGAKIMLRTGYMIHFWSLHLDYTSYGP 142

Query: 100 TINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQ 159
                 L      +  G  +       ++  +    ++  +  E+    I          
Sbjct: 143 YAANNKLVNKLDQIMAGENVGRGPQIYEVLDLPMMKKWIEKSDEI-PIFIAGDFNGPSHL 201

Query: 160 PHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF---------WDY 210
                   I  +        ++  ++     F +          + ++         W+Y
Sbjct: 202 DWTEQTKKIHGDWVVRWPATKELEERKFTDTFREIYPNVVTNPGI-TWSTVNKFNPEWNY 260

Query: 211 YADSWSKNKGIRIDHIMLSPEATSL--LHSARIDTKPR-----GWTKPSDHTPVIVSL 261
                      RID +           L  +  +   R         PSDH  V    
Sbjct: 261 TIPEPQD----RIDFLFYRGPVVPYQILTYSGCEKPQRIPFHAHNDYPSDHFSVFADY 314


>gi|302346426|ref|YP_003814724.1| oxidoreductase, NAD-binding domain protein [Prevotella
           melaninogenica ATCC 25845]
 gi|302150879|gb|ADK97140.1| oxidoreductase, NAD-binding domain protein [Prevotella
           melaninogenica ATCC 25845]
          Length = 515

 Score = 35.5 bits (80), Expect = 8.5,   Method: Composition-based stats.
 Identities = 20/197 (10%), Positives = 47/197 (23%), Gaps = 9/197 (4%)

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
           H          G+ +++             + L   +      ++       +       
Sbjct: 74  HDAVERWTHIPGIQVMALCDYERDRAERCQEYLRKASMPAADIYSGEDGYKELCKRKDID 133

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
              I        +   +         +E+   +     + +I          +   + C+
Sbjct: 134 LVYIAPDWKHHFLVAYEAMNNGKHVAVEVPAAMNLTEIWKLIDISEKKRLHCMMLENCCY 193

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYS-FWD-YYADSWSKNKGIRIDH-------I 226
                 S    Q   F + +       H  S FWD Y+        G R+D+       +
Sbjct: 194 DFFELNSLNMAQKDVFGEILYVQGAYRHELSKFWDAYWKKDAQDKLGWRLDYNQKFRGDV 253

Query: 227 MLSPEATSLLHSARIDT 243
             +     +     I  
Sbjct: 254 YATHGLGPIAQVLNIHR 270


>gi|291298919|ref|YP_003510197.1| hypothetical protein Snas_1397 [Stackebrandtia nassauensis DSM
           44728]
 gi|290568139|gb|ADD41104.1| hypothetical protein Snas_1397 [Stackebrandtia nassauensis DSM
           44728]
          Length = 160

 Score = 35.5 bits (80), Expect = 8.5,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 21/52 (40%), Gaps = 3/52 (5%)

Query: 213 DSWSKNKGIRIDHIMLSPEATSLLHSARIDTKP-RGWTKPSDHTPVIVSLDI 263
               K  G RID I+ +      +H A I+T   R     SDH  V   + +
Sbjct: 109 RPRPKPDGRRIDWIIATERFA--VHKAGINTWVTRHDNLCSDHWAVQAVVSL 158


>gi|288802525|ref|ZP_06407964.1| oxidoreductase, Gfo/Idh/MocA family [Prevotella melaninogenica D18]
 gi|288335053|gb|EFC73489.1| oxidoreductase, Gfo/Idh/MocA family [Prevotella melaninogenica D18]
          Length = 515

 Score = 35.5 bits (80), Expect = 8.7,   Method: Composition-based stats.
 Identities = 20/197 (10%), Positives = 47/197 (23%), Gaps = 9/197 (4%)

Query: 56  HIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPH 115
           H          G+ +++             + L   +      ++       +       
Sbjct: 74  HDAVERWTHIPGIQVMALCDYERDRAERCQEYLRKASMPAADIYSGEDGYKELCKRKDID 133

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
              I        +   +         +E+   +     + +I          +   + C+
Sbjct: 134 LVYIAPDWKHHFLVAYEAMNNGKHVAVEVPAAMNLTEIWKLIDISEKKRLHCMMLENCCY 193

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYS-FWD-YYADSWSKNKGIRIDH-------I 226
                 S    Q   F + +       H  S FWD Y+        G R+D+       +
Sbjct: 194 DFFELNSLNMAQKDVFGEILYVQGAYRHELSKFWDAYWKKDAQDKLGWRLDYNQKFRGDV 253

Query: 227 MLSPEATSLLHSARIDT 243
             +     +     I  
Sbjct: 254 YATHGLGPIAQVLNIHR 270


>gi|147771823|emb|CAN71339.1| hypothetical protein VITISV_043792 [Vitis vinifera]
          Length = 719

 Score = 35.5 bits (80), Expect = 8.7,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 21/60 (35%), Gaps = 9/60 (15%)

Query: 201 THHLYSFWDYYADSWSKNKGI-RIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIV 259
               +++     +    N+   R+D  ++SP              PR      DH P+I+
Sbjct: 19  QGGKFTW-----NEGHNNQAWARLDRFLVSPSWLDQFSRVTQSRLPRLIF---DHFPIIL 70


>gi|320104698|ref|YP_004180289.1| endonuclease/exonuclease/phosphatase [Isosphaera pallida ATCC
           43644]
 gi|319751980|gb|ADV63740.1| Endonuclease/exonuclease/phosphatase [Isosphaera pallida ATCC
           43644]
          Length = 375

 Score = 35.5 bits (80), Expect = 8.8,   Method: Composition-based stats.
 Identities = 36/258 (13%), Positives = 73/258 (28%), Gaps = 34/258 (13%)

Query: 15  RARIHNLAAWIKEN--------NPDIICLQET---KTED---KNFPFETLQSLNYHIETC 60
           RA  H L   + E          PD++ L E    +  +        E    L+Y     
Sbjct: 106 RALAHKL-DLLAETLLAMNGGRGPDLLALVEVENRRAVELLRDRLHRELPPELHYRHLVH 164

Query: 61  GQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPIT 120
              +       +    + I           +          +   + + +      +   
Sbjct: 165 HDLTTGRRVEPAILSRLPINPARTRTFGQRRILQAVVEVDGDELAVLVAHWTSRLTDQEG 224

Query: 121 STKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVR 180
           + + +  ++ ++     A +RL     ++  GD+N  PQ       +             
Sbjct: 225 TKRLEYGLACLEA--VEALRRLNPAADVLVMGDFNDHPQDRSLTEGLRAGPSPSAIDADG 282

Query: 181 QSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI-DHIMLSPEATSLLHSA 239
             F+    M   +   A        ++W Y         G  I DH+++SP         
Sbjct: 283 TLFRLWNLMTLIEPGTAG-------TYW-YRG-------GWEILDHLVVSPGLVDQ-RGW 326

Query: 240 RIDTKPRGWTKPSDHTPV 257
           ++  K       SD  P+
Sbjct: 327 QVLPKTLTLGDNSDRRPL 344


>gi|798882|emb|CAA89100.1| unknown [Saccharomyces cerevisiae]
          Length = 366

 Score = 35.5 bits (80), Expect = 8.8,   Method: Composition-based stats.
 Identities = 10/39 (25%), Positives = 18/39 (46%)

Query: 25 IKENNPDIICLQETKTEDKNFPFETLQSLNYHIETCGQK 63
          +K+  PD++ LQE    + NF  E    L + +     +
Sbjct: 8  LKKYRPDVVSLQEVDYNELNFWQENFHKLGFDVIFKRHE 46


>gi|71909379|ref|YP_286966.1| endonuclease/exonuclease/phosphatase [Dechloromonas aromatica RCB]
 gi|71849000|gb|AAZ48496.1| Endonuclease/exonuclease/phosphatase [Dechloromonas aromatica RCB]
          Length = 252

 Score = 35.5 bits (80), Expect = 8.8,   Method: Composition-based stats.
 Identities = 31/268 (11%), Positives = 72/268 (26%), Gaps = 34/268 (12%)

Query: 3   VVTVATWNVN-SI-----RARIHNLAAWIKENNPDIICLQETKTEDKNFPFETLQSLNYH 56
            + + T+N++        R  +H L   ++  NPDI+ LQE     +       ++ +  
Sbjct: 5   TLHITTFNIHKGFSQFNRRMMVHELRERLRHLNPDIVFLQEV----QGLHLGHAENHDDW 60

Query: 57  IETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHG 116
            ++   +        S      ++         + +R                 L + H 
Sbjct: 61  PDSPQHEFLAEDVWASCAYGQNMIYDHGHHGNAILSR-----------------LPILHS 103

Query: 117 NPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFT 176
           +    T    +   +        +        +    +    +          +  A  T
Sbjct: 104 HNQDVTHLQFEKRGLLHCQIELPEGPAAHCVCVHLSLFGYSRRKQMDALATYLDKTADPT 163

Query: 177 LEVRQSFQKLQNMGFTDAIRATH-DTHHLYSFWD-YYADSWSKNKGI-RIDHIMLSPEAT 233
             +  +              A       ++S      A S+     + R+D I +     
Sbjct: 164 APLIIAGDFNDWGNRAGEHMARRLGLREVFSGPSGNPARSFPAAMPMFRLDRIYV-RGFD 222

Query: 234 SLLHSARIDTKPRGWTKPSDHTPVIVSL 261
             +    +      W+  SDH  +   L
Sbjct: 223 --VKRTEVHHG-LPWSNISDHAALSAYL 247


>gi|317148498|ref|XP_001822371.2| endonuclease/exonuclease/phosphatase family protein [Aspergillus
           oryzae RIB40]
          Length = 325

 Score = 35.5 bits (80), Expect = 8.9,   Method: Composition-based stats.
 Identities = 28/274 (10%), Positives = 66/274 (24%), Gaps = 33/274 (12%)

Query: 26  KENNPDIICLQETKTEDKNFP-------------FETLQSLNYHIETCGQKSYNGVAILS 72
           +  +   ICLQE    D+                 E  +    +I       +       
Sbjct: 46  RNQDA-FICLQEV-LHDQLIDIHSGLNREHSAASAEAGEDAWAYIGVGRDDGHEAGEYSP 103

Query: 73  KYQPIEIV---THLPGDDLDVQARFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKIS 129
            +    +            +      ++    + + + IG                    
Sbjct: 104 IFYRPSVWQLRHWETVWLSETPHVPSKSWDAASIRIVTIGVFTHHTSRQTILAMNTHLDD 163

Query: 130 WIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNM 189
              R    A+  +  +     +G++  +         +  E        +  +   L + 
Sbjct: 164 QGSRSRFEAAHIILRKIDEYESGEHKDVISAVFLTGDLNSEETQEAYSVLTGNESTLIDA 223

Query: 190 GFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATS---------LLHSAR 240
                    +  H  ++ + Y      K    RID+++L P              +    
Sbjct: 224 AKAVDPVEHYGNHLTWTGFGY-----EKEDPSRIDYVLLGPRPMEVLNNGGQPWKVEGYS 278

Query: 241 IDTKPRGWTKP-SDHTPVIVSLDIPEPRKKQQDS 273
           +           SDH  V+V + +    +     
Sbjct: 279 VLANRFDDGVFNSDHRAVVVDMRLCSKTRTMDPR 312


>gi|225431045|ref|XP_002273981.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 1044

 Score = 35.5 bits (80), Expect = 8.9,   Method: Composition-based stats.
 Identities = 17/141 (12%), Positives = 47/141 (33%), Gaps = 7/141 (4%)

Query: 120 TSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEV 179
                    + +   +    + +  EE     G ++        +N I +  +     E+
Sbjct: 55  CMDGMRWVFTGVYGPVCRRDREVFWEELGSIKGLWSDPWCVGGDFNMIRYPEERRRGGEL 114

Query: 180 RQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSA 239
             S ++   +     +R       L+++     + +      R+D  +++ E   + + A
Sbjct: 115 SASMRRFTEVVEDLELRDYPLQGGLFTWRGGLNNQFQ----SRLDRFLVTDEWDRMFNGA 170

Query: 240 RIDTKPRGWTKPSDHTPVIVS 260
               +       SDH P+++ 
Sbjct: 171 ---KQGILARPVSDHFPILLE 188


>gi|163310734|ref|NP_653107.2| protein angel homolog 1 [Mus musculus]
 gi|218563496|sp|Q8VCU0|ANGE1_MOUSE RecName: Full=Protein angel homolog 1
          Length = 667

 Score = 35.5 bits (80), Expect = 8.9,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 29/75 (38%), Gaps = 10/75 (13%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQ 62
           +  WN      R  NL    +  +PDI+CLQE   ++ ++  +    L+ + +      +
Sbjct: 269 ILNWN-----YRFANLMQEFQHWDPDILCLQEV--QEDHYWEQLEPSLRMMGFTCFYKRR 321

Query: 63  KSYNGVAILSKYQPI 77
                      Y+P 
Sbjct: 322 TGCKTDGCAVCYKPT 336


>gi|114654104|ref|XP_001163086.1| PREDICTED: angel homolog 1 isoform 1 [Pan troglodytes]
 gi|114654106|ref|XP_001163119.1| PREDICTED: angel homolog 1 isoform 2 [Pan troglodytes]
          Length = 624

 Score = 35.5 bits (80), Expect = 8.9,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 29/78 (37%), Gaps = 16/78 (20%)

Query: 6   VATWN---VNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIET 59
           +  WN   VN        L    +  +PDI+CLQE   ++ ++  +    L+ + +    
Sbjct: 226 ILNWNYRFVN--------LMQEFQHWDPDILCLQEV--QEDHYWEQLEPSLRMMGFTCFY 275

Query: 60  CGQKSYNGVAILSKYQPI 77
             +           Y+P 
Sbjct: 276 KRRTGCKTDGCAVCYKPT 293


>gi|37361844|gb|AAQ91035.1| LRRGT00079 [Rattus norvegicus]
          Length = 602

 Score = 35.5 bits (80), Expect = 9.0,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 24/69 (34%), Gaps = 10/69 (14%)

Query: 186 LQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKP 245
           +  M  TD  R  +     Y+F+     ++SK     IDHI+      +      I    
Sbjct: 338 MSQMDLTDIYRTFYPKAKGYTFFSAPHGTFSK-----IDHIIGQKTGLNRYRKIEIIPCV 392

Query: 246 RGWTKPSDH 254
                 SDH
Sbjct: 393 L-----SDH 396


>gi|84489269|ref|YP_447501.1| hypothetical protein Msp_0458 [Methanosphaera stadtmanae DSM 3091]
 gi|84372588|gb|ABC56858.1| hypothetical protein Msp_0458 [Methanosphaera stadtmanae DSM 3091]
          Length = 131

 Score = 35.5 bits (80), Expect = 9.0,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 2/42 (4%)

Query: 223 IDHIMLSPEATSLL-HSARIDTKPRGWTKPSDHTPVIVSLDI 263
           ID++   PE  +     +RI+         SDH P+I  +DI
Sbjct: 91  IDYLFAKPELITSFDVGSRIEYAN-NEDNHSDHVPLIFEIDI 131


>gi|157823485|ref|NP_001102187.1| protein angel homolog 1 [Rattus norvegicus]
 gi|218563497|sp|B2RYM0|ANGE1_RAT RecName: Full=Protein angel homolog 1
 gi|149025240|gb|EDL81607.1| angel homolog 1 (Drosophila) (predicted) [Rattus norvegicus]
          Length = 667

 Score = 35.5 bits (80), Expect = 9.1,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 29/75 (38%), Gaps = 10/75 (13%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQ 62
           +  WN      R  NL    +  +PDI+CLQE   ++ ++  +    L+ + +      +
Sbjct: 269 ILNWN-----YRFANLMQEFQHWDPDILCLQEV--QEDHYWEQLEPSLRMMGFTCFYKRR 321

Query: 63  KSYNGVAILSKYQPI 77
                      Y+P 
Sbjct: 322 TGCKTDGCAVCYKPT 336


>gi|17512364|gb|AAH19148.1| Angel homolog 1 (Drosophila) [Mus musculus]
          Length = 667

 Score = 35.5 bits (80), Expect = 9.1,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 29/75 (38%), Gaps = 10/75 (13%)

Query: 6   VATWNVNSIRARIHNLAAWIKENNPDIICLQETKTEDKNFPFET---LQSLNYHIETCGQ 62
           +  WN      R  NL    +  +PDI+CLQE   ++ ++  +    L+ + +      +
Sbjct: 269 ILNWN-----YRFANLMQEFQHWDPDILCLQEV--QEDHYWEQLEPSLRMMGFTCFYKRR 321

Query: 63  KSYNGVAILSKYQPI 77
                      Y+P 
Sbjct: 322 TGCKTDGCAVCYKPT 336


>gi|38346716|emb|CAE04866.2| OSJNBa0086O06.14 [Oryza sativa Japonica Group]
          Length = 1205

 Score = 35.5 bits (80), Expect = 9.1,   Method: Composition-based stats.
 Identities = 22/148 (14%), Positives = 46/148 (31%), Gaps = 6/148 (4%)

Query: 116 GNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACF 175
           G  +      D++  + +    A   +  EE      +   + +          +     
Sbjct: 110 GELLGHETKTDQLLLMDKPHGRAEGDIIGEEERNDVDETRSLEEDPWLMIGDFNDAMWQI 169

Query: 176 TLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF--WDYYAD-SWSKNKGIRIDHIMLSPEA 232
               R    + Q   F + +         +    W Y  + +   N  +R+D  + SP  
Sbjct: 170 EHRSRVKHSERQMRDFREVLVECDLQDIGFQCVPWTYDNNQASPNNVKVRLDRAVASPVW 229

Query: 233 TSLLHSARIDTKPRGWTKPSDHTPVIVS 260
            ++   A I       T  SDH P+++ 
Sbjct: 230 RAMFDQANIMH---LTTACSDHVPLLLE 254


>gi|332020639|gb|EGI61046.1| hypothetical protein G5I_10736 [Acromyrmex echinatior]
          Length = 360

 Score = 35.5 bits (80), Expect = 9.3,   Method: Composition-based stats.
 Identities = 14/131 (10%), Positives = 34/131 (25%), Gaps = 13/131 (9%)

Query: 132 KRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGF 191
             F+      L  +           + +  D  +                          
Sbjct: 141 HDFVSLCETWLNEKGWDAVKDRIGELGEEDDGKDRCSKNKVIRNGGRDFVKRITKYGWHI 200

Query: 192 TDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKP 251
            +     +     Y++ +    S        ID+ +++      +   RID         
Sbjct: 201 LNGRSRDNWEEK-YTYVEIRDSSV-------IDYALVNDNICDRIVEFRID-----ARVN 247

Query: 252 SDHTPVIVSLD 262
           S+H P+ ++L+
Sbjct: 248 SNHMPLSLTLE 258


>gi|157737125|ref|YP_001489808.1| endonuclease/exonuclease/phosphatase [Arcobacter butzleri RM4018]
 gi|157698979|gb|ABV67139.1| endonuclease/exonuclease/phosphatase [Arcobacter butzleri RM4018]
          Length = 526

 Score = 35.5 bits (80), Expect = 9.3,   Method: Composition-based stats.
 Identities = 40/266 (15%), Positives = 70/266 (26%), Gaps = 39/266 (14%)

Query: 34  CLQETKTED-KNFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQA 92
            LQE + +D      + L    Y        S  G+  LSK +     +        +  
Sbjct: 79  GLQEIENKDLMQLLQKKLPKYKYFSFIKYPDSAVGLGFLSKVEIKNSSSIDVKFIDKLFR 138

Query: 93  RFIEATFTINTQTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAG 152
             +E TF       +I N + P      + +     +   R       +L  +   I  G
Sbjct: 139 PILETTFIYENVEFKIFNNHWPSKAAAENYRIKYAKTLQDR-----LLKLPKDYDYILLG 193

Query: 153 DYNIIPQPHD-CYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFW--- 208
           D+N      +     +     +  T         + +   T       +    Y+ W   
Sbjct: 194 DFNSNYNEFETFKKDLKLNLTSGVTGINHVLNTTIDDHFITYDDILKEEKKVHYNLWLDI 253

Query: 209 --DYYADSWSKNKGIRIDHIMLSPEATSL------LHSARIDT----------------- 243
                  +  KN+    D+I+LS              S  +                   
Sbjct: 254 KTSERFSTKFKNQNNTPDNIILSSSLFDNKNLTYIKKSFEVFKPNYLYENGEVKRWKMTQ 313

Query: 244 ----KPRGWTKPSDHTPVIVSLDIPE 265
               K       SDH P+     I +
Sbjct: 314 DRNIKIHKGEGFSDHLPIFAKFSIND 339


>gi|145511109|ref|XP_001441482.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124408732|emb|CAK74085.1| unnamed protein product [Paramecium tetraurelia]
          Length = 2135

 Score = 35.5 bits (80), Expect = 9.3,   Method: Composition-based stats.
 Identities = 15/151 (9%), Positives = 30/151 (19%), Gaps = 1/151 (0%)

Query: 44   NFPFETLQSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINT 103
              P++     NY  +        GV      Q  +I  H+                  + 
Sbjct: 1397 QIPYDGCFECNYQCQPECTDCQLGVCYKCGVQGWDIENHICFPVCGDGYVVKGQEQCDDG 1456

Query: 104  QTLRIGNLYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDC 163
             T+     ++             ++        F     + +          I  +  D 
Sbjct: 1457 NTVEFDGCFMCQYQCEEMCT-TCELGICYECDVFGWVIEQHKCTPYCGDGVVIGYEQCDD 1515

Query: 164  YNPIIWENDACFTLEVRQSFQKLQNMGFTDA 194
             N    +      L   Q             
Sbjct: 1516 MNDDFNDGCYKCKLACDQYCTDCLEGICQKC 1546


>gi|223999779|ref|XP_002289562.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220974770|gb|EED93099.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 1860

 Score = 35.5 bits (80), Expect = 9.5,   Method: Composition-based stats.
 Identities = 13/93 (13%), Positives = 25/93 (26%), Gaps = 13/93 (13%)

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSP 230
                  + + +                  +   Y+      +S       R+D+I++ P
Sbjct: 7   WVTNSHGKNQLADFMAAANLQDAFYERHQQSPPTYT----RGNS-------RLDYILVDP 55

Query: 231 EATSLLHSARIDTKPRGWTKPSDHTPVIVSLDI 263
            A   +          G    SDH    V  D+
Sbjct: 56  VALPCIRRVGYLGTHEGN--FSDHCLEYVDFDM 86


>gi|37718787|gb|AAR01658.1| putative inositol polyphosphate 5-phosphatase [Oryza sativa
           Japonica Group]
          Length = 336

 Score = 35.5 bits (80), Expect = 9.5,   Method: Composition-based stats.
 Identities = 42/282 (14%), Positives = 79/282 (28%), Gaps = 34/282 (12%)

Query: 6   VATWNVNSIRARIHNLAAWIKEN-NPD--IICLQET-KTEDKNFPFETLQSLNYHIETCG 61
           + TWN+N  +  + ++   +  N   D  +  LQE  K +      ET+   +  +    
Sbjct: 54  IITWNMNG-KMSVEDVTKLVSSNRKFDLLVFGLQEVPKCDVAQVLQETMAETHILLCQKT 112

Query: 62  QKSYNGVAILSKYQPIEIVT---------HLPGDDLDVQARFIEATFTINTQTLRIGNLY 112
            +S       +K     I              G     +            + + +    
Sbjct: 113 MQSLQMFLFGAKSSEKYIRELKVDKHAVGGCGGIIGRKKGAVAMYINFSGIRMVFVSCHL 172

Query: 113 LPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQP---------HDC 163
             H N +     + +      F +   Q  +  +  ++ GD N   Q           + 
Sbjct: 173 AAHENKVEKRNSECQHISHSLFSKNDIQYTKSADITVWLGDLNYRLQGISSIPARKLIEE 232

Query: 164 YNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRI 223
                         E  +          T   + T+  +   S +D        +   RI
Sbjct: 233 NRQSKLRGKDQLLQEAEKGEVFNGYCEGTLLFKPTYKYNIGSSNYDTSYKIRVPSWTDRI 292

Query: 224 ----DHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSL 261
               DH   +    ++L+S       R     SDH PV   L
Sbjct: 293 LFKVDH---TSGLDAVLNSYEALDCIRS----SDHKPVRAHL 327


>gi|313219842|emb|CBY30759.1| unnamed protein product [Oikopleura dioica]
          Length = 1616

 Score = 35.1 bits (79), Expect = 9.6,   Method: Composition-based stats.
 Identities = 15/171 (8%), Positives = 41/171 (23%), Gaps = 7/171 (4%)

Query: 51  QSLNYHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGN 110
           + + +  E     S +       +  I       G     +         I T+   +  
Sbjct: 383 EGVGWSCEQEYCFSKSDCIYRCPHGTIC------GKANFWECSHPSECIHICTEEFNLDC 436

Query: 111 LYLPHGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWE 170
                 + +               +             ++   ++  P      +   + 
Sbjct: 437 RCPDEHSCLNPPCGMIDECTEDPEITCQDVFKWEINSHLYKCYFDGSPNYECLDDTWDYL 496

Query: 171 NDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLY-SFWDYYADSWSKNKG 220
            + C+  E                +   + T   Y ++ +Y+A   + N G
Sbjct: 497 QENCYPPECEPVPCTATFDNKERCVMGLNGTVDGYLTWDEYWAQYEAGNVG 547


>gi|294874344|ref|XP_002766909.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239868284|gb|EEQ99626.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 1177

 Score = 35.1 bits (79), Expect = 9.8,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 29/85 (34%), Gaps = 1/85 (1%)

Query: 188 NMGFTDAIRATHDTHHLYSFWDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRG 247
           +    + +   +D     +F  +   S        ID  M S +    +   ++D     
Sbjct: 340 DWAEKNGLHVINDCESPPTFRSHRTCSDGSIITSHIDVTMCSVDLVERVADWQVDWDDPS 399

Query: 248 WTKPSDHTPVIVSLDIPEPRKKQQD 272
               SDH  V V++ +    +++  
Sbjct: 400 SAV-SDHAAVKVAISLRLIARQEPP 423


>gi|195402333|ref|XP_002059761.1| GJ10044 [Drosophila virilis]
 gi|194155975|gb|EDW71159.1| GJ10044 [Drosophila virilis]
          Length = 765

 Score = 35.1 bits (79), Expect = 9.8,   Method: Composition-based stats.
 Identities = 22/205 (10%), Positives = 52/205 (25%), Gaps = 9/205 (4%)

Query: 4   VTVATWNVNSIRARIHNLAAWIKENNPDIICLQETK---------TEDKNFPFETLQSLN 54
           + +A WN   I  +   + A++  +N DI+ + E +           D +     L    
Sbjct: 154 LKMAYWNAAGISNKSREMEAFMHHHNVDIMMVIEIRQGTNRQSNPIRDIHANNAPLNIDG 213

Query: 55  YHIETCGQKSYNGVAILSKYQPIEIVTHLPGDDLDVQARFIEATFTINTQTLRIGNLYLP 114
           YH     +++ N  +                     Q + ++  +            +  
Sbjct: 214 YHTYVAKRRAPNQRSGGVATLNNPTRDQPTPPPTWQQQKHLQLQYICQPMHWAQHQQHKQ 273

Query: 115 HGNPITSTKYDDKISWIKRFLRFASQRLELEEPLIFAGDYNIIPQPHDCYNPIIWENDAC 174
                  +        +++   +  Q  +    L         P          W     
Sbjct: 274 LSAEHNMSIGLQHHPLVQQTAIWGLQNQQQWSTLAKNDQKLQQPDLWGHQLQRQWSMVTQ 333

Query: 175 FTLEVRQSFQKLQNMGFTDAIRATH 199
                +Q  Q +Q   +       +
Sbjct: 334 TDSMGQQKNQPIQLHQYIGVQPQKN 358


>gi|302774036|ref|XP_002970435.1| hypothetical protein SELMODRAFT_411008 [Selaginella moellendorffii]
 gi|300161951|gb|EFJ28565.1| hypothetical protein SELMODRAFT_411008 [Selaginella moellendorffii]
          Length = 350

 Score = 35.1 bits (79), Expect = 9.9,   Method: Composition-based stats.
 Identities = 22/127 (17%), Positives = 39/127 (30%), Gaps = 7/127 (5%)

Query: 148 LIFAGDYNIIPQPHDCYNPIIWENDACFTLEVRQSFQKLQNMGFTDAIRATHDTHHLYSF 207
            I AGD+N +    D +  II +           S            I         +++
Sbjct: 61  WILAGDFNFVDHEEDKWGGIIQDRRTRAERLAWNSLLLWIGTCDAYEIPGFVTHEPRFTW 120

Query: 208 WDYYADSWSKNKGIRIDHIMLSPEATSLLHSARIDTKPRGWTKPSDHTPVIVSLDIPEPR 267
            ++      +    R+D   L+ +         ID         SDH P+ V+L     R
Sbjct: 121 REHQCRGIQR----RLDRFYLTMDLCMQGGKLDIDNTYTD---FSDHHPIRVTLPFQRSR 173

Query: 268 KKQQDST 274
             ++   
Sbjct: 174 GPRKPVA 180


  Database: nr
    Posted date:  May 13, 2011  4:10 AM
  Number of letters in database: 999,999,932
  Number of sequences in database:  2,987,209
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 13, 2011  4:17 AM
  Number of letters in database: 999,998,956
  Number of sequences in database:  2,896,973
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 13, 2011  4:23 AM
  Number of letters in database: 999,999,979
  Number of sequences in database:  2,907,862
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 13, 2011  4:29 AM
  Number of letters in database: 999,999,513
  Number of sequences in database:  2,932,190
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 13, 2011  4:33 AM
  Number of letters in database: 792,586,372
  Number of sequences in database:  2,260,650
  
Lambda     K      H
   0.309    0.124    0.406 

Lambda     K      H
   0.267   0.0384    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,961,136,773
Number of Sequences: 13984884
Number of extensions: 91584019
Number of successful extensions: 288319
Number of sequences better than 10.0: 7191
Number of HSP's better than 10.0 without gapping: 3850
Number of HSP's successfully gapped in prelim test: 3341
Number of HSP's that attempted gapping in prelim test: 271950
Number of HSP's gapped (non-prelim): 9640
length of query: 281
length of database: 4,792,584,752
effective HSP length: 137
effective length of query: 144
effective length of database: 2,876,655,644
effective search space: 414238412736
effective search space used: 414238412736
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.3 bits)
S2: 80 (35.5 bits)